TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.697699 %AT, 3452761 nt, 16002 terms. Intergenic: 0.75724 %AT, H2T: 658470 nt, 5530 terms; T2T: 118566 nt, 2664 terms; H2H: 134631 nt, 2720 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|110666922|ref|NC_008226.1| Clostridium difficile 630 plasmid pCD630, complete sequence (length 7881) CDP01 99 - 1 - | hypothetical protein CDP02 550 - 257 - | putative HNH endonuclease CDP03 765 - 550 - | hypothetical protein TERM 1 1008 - 986 - R 83 -9.2 -3.58343 | opp_overlap 986 TTTATTATCTTTAAA GCCCTCTAAC TAA ATTAGAAGGC TTTTTTATTTATTCA TERM 2 986 - 1008 + r 87 -6.3 -5.80003 | opp_overlap 986 TTTATTATCTTTAAA GCCCTCTAA CTAAA TTAGAAGGC TTTTTTATTTATTCA CDP04 2348 - 1017 - | putative phage capsid protein TERM 3 1498 - 1517 + g 79 -9.4 -3.47345 | overlap 1509 TAAAGTCCAGCTTTA TCTATTGC ACTT GCAATAGA TTCTGCTATAGCATT TERM 4 2540 - 2516 - R 100 -8.7 -5.7946 | opp_overlap 2516 TTTTCAATAAAAAAA GACCTCTAAAT AAA ACTTAGAAGTC TTTTTAATTCTTATA TERM 5 2516 - 2540 + r 70 -4.3 -5.01845 | opp_overlap 2516 TTTTCAATAAAAAAA GACCTCTAAAT AAA ACTTAGAAGTC TTTTTAATTCTTATA CDP05 2739 - 2635 - | hypothetical protein CDP06 3358 - 2903 - | hypothetical protein CDP07 6104 - 3495 - | putative deoxyribonuclease TERM 6 4170 - 4190 + g 70 -5.5 -4.31379 | ACATATGTTGTTGTC TATCCTCAT GTC ATGATGATA TTTTAATAAGTTACT TERM 7 4434 - 4444 + g 72 -4 -5.04597 | TTGATAGTAGTTATT GTAA GCA TTAC TTTTTATATATAACT TERM 8 5596 - 5606 + g 72 -4 -5.17488 | GAATAGTTTTGTTTC TCTA GCA TAGA TTTTATTTTAATATT CDP08 6686 - 6366 - | hypothetical protein CDP09 6830 - 6979 + | hypothetical protein TERM 9 7002 - 7030 + F 75 -5.5 -5.08255 | opp_overlap 7016 AAAGGTTCTTATTTA TAACTACTAGA AAGCTAC TTTAGTAGTTA TTTTATTTTGGAGGT CDP10 7052 - 7597 + | hypothetical protein CDP11 7881 - 7780 - | hypothetical protein SEQUENCE gi|126697566|ref|NC_009089.1| Clostridium difficile 630, complete genome (length 4290252) TERM 1 866 - 840 - g 73 -3.6 -5.29782 | TATACTTAGAAAAAA GGCTCAACTAGA ACG TATAGATGTGCC AAATGAGGTTATGTC dnaA 1 - 1320 + | chromosomal replication initiator protein TERM 2 1411 - 1453 + F 86 -9.5 -4.08571 | opp_overlap 1413 1417, overlap 1413 1417 1451 TATCAAGTCTAAAAT AACAAAGATATTAACATCT TATAC ACATGTTAATATCTTTGTA TTTATAATGTTATAC TERM 3 1413 - 1451 + F 95 -12.1 -3.62893 | opp_overlap 1413 1417, overlap 1411 1417 TCAAGTCTAAAATAA CAAAGATATTAACATCT TATAC ACATGTTAATATCTTTG TATTTATAATGTTAT TERM 4 1451 - 1413 - f 100 -12.1 -4.21933 | opp_overlap 1413 1411 1417, overlap 1417 TCAAGTCTAAAATAA CAAAGATATTAACATCT TATAC ACATGTTAATATCTTTG TATTTATAATGTTAT TERM 5 1447 - 1417 - f 79 -7.1 -4.67697 | opp_overlap 1413 1411 1417, overlap 1413 GTCTAAAATAACAAA GATATTAACATCT TATAC ACATGTTAATATC TTTGTATTTATAATG TERM 6 1417 - 1447 + F 77 -7.1 -4.41609 | opp_overlap 1417 1413, overlap 1413 1411 GTCTAAAATAACAAA GATATTAACATCT TATAC ACATGTTAATATC TTTGTATTTATAATG TERM 7 2416 - 2395 - g 74 -5.3 -4.9041 | overlap 2405 ATCAGAAAAAAATAA TCTTATAAA GTTA TCTATAAGA GATAAAGTAATGGCA dnaN 1460 - 2668 + | DNA polymerase III subunit beta CD0003 2805 - 3011 + | putative RNA-binding mediating protein recF 3029 - 4144 + | DNA replication and repair protein TERM 8 4793 - 4782 - g 78 -3 -5.59534 | AAGGACAAGAAAAAA GAAA AGAA TTTC ACTATACAGGTGGTT gyrB 4145 - 6046 + | DNA gyrase subunit B gyrA 6066 - 8492 + | DNA gyrase subunit A TERM 9 8518 - 8477 - f 74 -6.1 -4.65933 | opp_overlap 8487, overlap 8487 8490 GATTGCCAAAATAAA TATTGAAGAAGAATAGGAT AAAT ATCCTATTCTTTTTGTATA ATGTAGTTAGATAAA TERM 10 8487 - 8508 + F 100 -10.3 -5.02502 | opp_overlap 8487 8477 8490 ATAAATATTGAAGAA GAATAGGAT AAAT ATCCTATTC TTTTTGTATAATGTA TERM 11 8508 - 8487 - f 91 -10.3 -3.7626 | opp_overlap 8487, overlap 8477 8490 ATAAATATTGAAGAA GAATAGGAT AAAT ATCCTATTC TTTTTGTATAATGTA CD0007 8561 - 8857 + | hypothetical protein CD0008 8857 - 9117 + | hypothetical protein rsbV 9135 - 9446 + | anti-sigma-B factor antagonist rsbW 9450 - 9857 + | anti-sigma-B factor (serine-protein kinase) TERM 12 9880 - 9865 - g 88 -7.6 -4.89009 | overlap 9869 ATATTTAATGAAAAA TGTAGC TAAT GCTACA CATTACCTAAATATG sigB 9857 - 10630 + | RNA polymerase sigma-B factor TERM 13 10966 - 10951 - f 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 14 11609 - 11621 + F 85 -10.5 -3.05463 | TGAGTACTAGGTGTC GGGGG TTA CCCCC TTCGGTGCCGCAGCT TERM 15 13116 - 13095 - f 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGCGGACATATC TERM 16 13353 - 13342 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 17 15836 - 15819 - f 73 -5.7 -4.78764 | TAAACTTATTAAAAA CTTAATA GAAA TATTAAG CATAAAGATTATGTG TERM 18 16565 - 16551 - g 82 -7.2 -4.76233 | CAATAAAAGAAGAAA CTATAG AAG CTATAG TAAAAGAGTTAAAGG CD0012 16073 - 16600 + | putative small-molecule-binding protein CD0013 16612 - 17493 + | putative mechanosensitive ion channel protein serS1 17952 - 19223 + | seryl-tRNA synthetase TERM 19 19298 - 19329 + F 100 -9 -5.82172 | opp_overlap 19298 CAATAAATAAAAAAA CTATGAAATTATTA TAAA TATTAATTTCATAG TTTTTTTATGTTAAT TERM 20 19329 - 19298 - f 100 -9 -6.08342 | opp_overlap 19298 CAATAAATAAAAAAA CTATGAAATTATTA TAAA TATTAATTTCATAG TTTTTTTATGTTAAT TERM 21 19622 - 19611 - g 81 -5.8 -5.22768 | opp_overlap 19610 19611, overlap 19614 ATAATAAAAAAGAAA CACC AATA GGTG CTATTATAGTTAAAG CD0015 19544 - 19999 + | putative cytosine/adenosine deaminase TERM 22 20416 - 20434 + F 90 -5.3 -5.9003 | opp_overlap 20412 20416 TATATAAAAGACTAA TCCCTTA GATAA TGAGGGA TTTTTTTATTAATTT dnaH 20470 - 22107 + | DNA polymerase III subunits gamma and tau TERM 23 22133 - 22113 - f 72 -4.9 -5.02606 | GAGTAAATAATAAAA TACTATTAT GAT ATAATAATA AAATGAAAATAAGTT CD0017 22166 - 22516 + | hypothetical protein TERM 24 22704 - 22686 - g 71 -4.6 -4.72846 | opp_overlap 22680 22686 TTATAGATGCAAAAA GAGAAATA AGA TATTGCTC AATTTGTTGTAATAT recD 22529 - 23128 + | recombination protein TERM 25 23123 - 23158 + T 100 -11.4 -5.16572 | opp_overlap 23124 23132, overlap 23124 GAAGGCAGAAGAGAA ATATAAAAATCGAGGT TAAT ACCTCGATTTTTGTAG TTTTTTGAGTTAAAT TERM 26 23124 - 23157 + T 100 -14.9 -3.68859 | opp_overlap 23124 23132, overlap 23123 AAGGCAGAAGAGAAA TATAAAAATCGAGGT TAAT ACCTCGATTTTTGTA GTTTTTTGAGTTAAA TERM 27 23157 - 23124 - T 100 -12.7 -4.28791 | opp_overlap 23124 23123, overlap 23132 AAGGCAGAAGAGAAA TATAAAAATCGAGGT TAAT ACCTCGATTTTTGTA GTTTTTTGAGTTAAA TERM 28 23149 - 23132 - T 100 -9.9 -5.26155 | opp_overlap 23124 23123, overlap 23124 AGAGAAATATAAAAA TCGAGGT TAAT ACCTCGA TTTTTGTAGTTTTTT CD0019 24766 - 23561 - | putative glycosyl transferase TERM 29 24576 - 24540 - G 70 -8.9 -2.68823 | opp_overlap 24539 24549, overlap 24539 TTTGTTTCAGATAAT CTATATACACTTCCATA GGC TTTGGGAGTATATATAG CAGATTTTTCGTATC TERM 30 25421 - 25406 - H 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 31 26791 - 26835 + H 75 -8.2 -3.53091 | gap 1, opp_overlap 26822, overlap 26790 GGAGAATTACCTACT GT-TTAATTTTGAGGGTTCGT TTTT ACGAATACTCAAAATTAGCAC TTTAAGCAACGGGAT TERM 32 27328 - 27307 - H 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGCGGACATATC TERM 33 27492 - 27477 - H 81 -10.4 -2.71011 | overlap 27464 ACCCTGTGGGAAGCA GGAGGG ACCA CCCTCC AAGGCTAAATACTAC TERM 34 27565 - 27554 - H 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 35 30707 - 30691 - H 72 -8.7 -2.62616 | TCAGCTGGGAGAGCA CCTGCCT TAC AAGCAGG GGGTCACAGGTTCGA TERM 36 31170 - 31156 - H 70 -7.8 -3.322 | opp_overlap 31150 31156 AGCTGGATAGAGCAA CGCCCT TCT AAGGCG TGTGTCCGGGGTTCG TERM 37 31509 - 31493 - H 72 -8.7 -2.62616 | opp_overlap 31506, overlap 31506 TCAGTCGGTAGAGCA GGGGACT GAA AATCCCC GTGTCGGTGGTTCGA TERM 38 32538 - 32522 - H 72 -8.7 -2.62616 | TCAGCTGGGAGAGCA CCTGCCT TAC AAGCAGG GGGTCACAGGTTCGA TERM 39 33094 - 33080 - H 70 -7.8 -3.322 | opp_overlap 33074 33080 AGCTGGATAGAGCAA CGCCCT TCT AAGGCG TGTGTCCGGGGTTCG TERM 40 33434 - 33418 - H 72 -8.7 -2.62616 | opp_overlap 33431, overlap 33431 TCAGTCGGTAGAGCA GGGGACT GAA AATCCCC GTGTCGGTGGTTCGA TERM 41 34036 - 34020 - H 72 -8.7 -2.62616 | TCAGCTGGGAGAGCA CCTGCCT TAC AAGCAGG GGGTCACAGGTTCGA TERM 42 34098 - 34077 - H 95 -11.7 -3.62096 | opp_overlap 34077 TCCCACCAGTGCAAA CCTCTAGTA AAAC TACTAGAGG TTTTATTTTTGATTG TERM 43 34077 - 34098 + H 100 -11.7 -5.34655 | opp_overlap 34077 TCCCACCAGTGCAAA CCTCTAGTA AAAC TACTAGAGG TTTTATTTTTGATTG CD0020 34145 - 34558 + | hypothetical protein TERM 44 35682 - 35703 + G 75 -6 -4.7497 | AAAACATGTGGGTTA TTCTAATG CGGGAA CATTAGAA TTTTTAGTAGATGCA TERM 45 37079 - 37056 - g 71 -3.2 -5.31519 | AGAGTTAAAGAAAAA TGTAAAAGCA CCAA TACATTTACA CACTCATGATACAAG pyc 34867 - 38298 + | pyruvate carboxylase TERM 46 38322 - 38357 + F 91 -7.1 -5.59962 | AAATAAATTAAAAAG CACTCTGAAATGTTT AATAAA AAATGTTTTAGAGTG TTTTTATTTATTTTA TERM 47 38409 - 38395 - f 73 -2.8 -5.75945 | ATTTGTTAAAAAAAA GAGG ACAATTA CCTC CAGATGTAGAAATAA CD0022 38528 - 40468 + | putative translation elongation factor TERM 48 40530 - 40566 + F 100 -12.6 -4.98758 | opp_overlap 40533 TTTTTAGGGTTTTAA CTAGGTATAGGTTTAT GTTAG GTAAACTTATACCTAG TTTTTATACATTTTT ctsR 40921 - 41385 + | transcriptional regulator CD0024 41392 - 41886 + | putative DNA repair protein TERM 49 42576 - 42561 - g 76 -6.2 -4.61147 | TAATATTATAGAAAA TGTAAG TGGA CTTACA AAAGATGCAATTTCA CD0025 41902 - 42927 + | ATP:guanido phosphotransferase clpC 42914 - 45361 + | ATP-dependent Clp protease TERM 50 45356 - 45342 - f 81 -5.8 -5.32699 | overlap 45355 TCAAAGATGAAAAAA TAGTTT TTG AAACTA AATAATTTAATAGAG TERM 51 45421 - 45458 + F 100 -11.7 -4.56436 | gap 1, opp_overlap 45420 45419 45414 45421, overlap 45419 AATCTAAACAAAATT TTAAGGGCAATGAATCTA TAA TA-ATTCATTGTCCTTAA TTATTTTATTTAATC TERM 52 45458 - 45421 - f 75 -9.5 -2.72126 | gap 1, opp_overlap 45421 45419, overlap 45420 45419 45414 AATCTAAACAAAATT TTAAGGGCAATGAATCTA TAA TA-ATTCATTGTCCTTAA TTATTTTATTTAATC TERM 53 46052 - 46032 - g 74 -7.7 -3.74347 | opp_overlap 46031, overlap 46046 TTTAGAAAGTGTAAA TCCAGAATT AAT AATTCTAGA CTCAATTCAAACTGT radA 45541 - 46914 + | DNA repair protein RadA CD0028 46917 - 47987 + | DNA integrity scanning protein DisA CD0029 48076 - 49170 + | hypothetical protein TERM 54 49192 - 49224 + F 86 -7.9 -4.83246 | CAAAGAAACCTATAA TTTGGGCTGTTTATT TTA AATAGATGGTCCAAA TTTATTTATTTATAA TERM 55 50086 - 50102 + G 70 -5.3 -4.614 | opp_overlap 50084 50086 AAAAAAATATAGATA TATATTT AAA AAATATA TTTTCTATGGTTGAA TERM 56 50191 - 50179 - g 78 -4.1 -5.3658 | overlap 50184 ATTATAAAAATAAAA GAAGA CTT TCTCC AATAATAAAATTAAA TERM 57 50904 - 50888 - g 70 -3.7 -5.04597 | ACTTACATATAAAAA TATACCA AAG TGGTCTA TAATAGTTTTTTCTT CD0030 49299 - 51476 + | hypothetical protein TERM 58 51543 - 51519 - T 93 -11.7 -3.23637 | opp_overlap 51516 51515, overlap 51514 AATACATTAATTTAA CTTCTTTATTT ACA AAATAAAGAAG AAAGTTTATAAAAAA TERM 59 51623 - 51576 - T 100 -10.4 -5.59534 | gap 1, opp_overlap 51578, overlap 51578 AATTATAATAAAAAA GAGTTTATCTCAAAA-TTGATTA TTC TAATCAAATTTTAAGATAAACTT TTTTTATTATAAAGA TERM 60 51578 - 51621 + T 100 -10.8 -5.88565 | gap 1, opp_overlap 51576 51578 TTATAATAAAAAAGA GTTTATCTCAAAA-TTGATTA TTC TAATCAAATTTTAAGATAAAC TTTTTTTATTATAAA TERM 61 51621 - 51578 - T 100 -13 -4.41512 | gap 1, opp_overlap 51578, overlap 51576 TTATAATAAAAAAGA GTTTATCTCAAAA-TTGATTA TTC TAATCAAATTTTAAGATAAAC TTTTTTTATTATAAA CD0031 52507 - 51662 - | AraC family transcription regulator TERM 62 53265 - 53241 - g 70 -5.8 -4.25053 | opp_overlap 53241, overlap 53238 CTATAACAGAAAGAA TGTGGAACAT AATGA ATGTTCCAAA TCGGTTTAAGGCTGT CD0032 52724 - 53890 + | putative beta-glucosidase TERM 63 54608 - 54596 - g 78 -6.3 -4.7373 | GGACCTTATGAAAAA GATTC AAT GAATC CAATTGTAACTTCAA TERM 64 55322 - 55307 - g 71 -4.8 -4.76075 | opp_overlap 55307 AGGATACCAATAAAA GATATA CCAA TATATC TTCGTCTGTATATAC CD0033 53912 - 55558 + | putative beta-xylosidase TERM 65 55609 - 55577 - f 75 -8.7 -3.1914 | gap 1, overlap 55576 AATCATTACTAAAAT TTTCAGAGCA-AAG GTAAAT CTTATGCTCTGAAA TAAGAAACATTAGAA TERM 66 55696 - 55708 + G 75 -4.9 -5.01732 | opp_overlap 55696 55704 AACTACGATTAGATA TGAAA AGA TTTCA TTTTTTGAAAGAATT TERM 67 55773 - 55786 + G 80 -6.7 -4.81814 | TATACTCAGCTATGT CAGCA TTTT TGCTG TTTTATTATACTAAT CD0034 55655 - 57028 + | putative xylose transporter TERM 68 57319 - 57341 + F 100 -5.6 -6.17268 | opp_overlap 57337, overlap 57336 57337 ACTATTTATGAAGGT GGTGGTAC AAGAAAA GTATCACC TTTTTTTTGTTATAC CD0035 57469 - 58422 + | transcriptional regulator acoA 58454 - 59422 + | acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit acoB 59447 - 60433 + | acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit TERM 69 60480 - 60467 - g 71 -2.3 -5.34857 | GCAAATAAAATAAAA GCCAC ACCA GCAGC TAGAAGTCAGGCAAG acoC 60446 - 61492 + | E2 component of acetoin dehydrogenase enzyme system (dihydrolipoamide acetyltransferase) TERM 70 62082 - 62107 + G 71 -6.9 -3.90112 | opp_overlap 62082 TTATCAGCATTAAAA GCAGCTCTTTT AGGT GGAAGAGTTGC TTTAGTTGAAGAAAA acoL 61659 - 63389 + | E3 component of acetoin dehydrogenase enzyme system (dihydrolipoyl dehydrogenase) TERM 71 63469 - 63511 + F 100 -25.4 -5.24129 | ACACTTACTTAGCCA TACCCCTTATTATGCAAATA ATT TATTTGCATAATAAGGGGTA TTTTTTATGGAAAAA TERM 72 63843 - 63827 - g 80 -2.3 -5.72254 | GCAAAGAATAAAAAA CTTAATT GAA AATGAAG ATAAGAAAAATCCTT CD0040 63807 - 66755 + | putative transcription antiterminator TERM 73 66875 - 66854 - g 80 -6.7 -4.6951 | gap 1, overlap 66840 66866 AGTATGTAAAAGAAA GCTACATACA AGC TGT-TGTAGC AAGAGAAAAAAAGTA CD0041 66733 - 67197 + | PTS system, IIA component TERM 74 67261 - 67232 - f 71 -8.1 -3.03505 | opp_overlap 67237, overlap 67229 AATGTAAAAAGATTA TTAAAGATTTCTA ACTA TAGATATCTTTAA AATAAAATAATTTCA TERM 75 67529 - 67494 - g 88 -7.6 -4.93296 | CTAGTAGTATAAAAA CACCAGTGATAAATGG ATTA CCTTTTTTAACTGGTG TCGGAATGGATAAAT CD0042 67277 - 67579 + | PTS system, IIB component CD0043 67656 - 69005 + | PTS system, IIC component CD0044 69040 - 69513 + | hypothetical protein CD0045 69685 - 70335 + | putative sugar-phosphate aldolase CD0046 70509 - 71441 + | putative lipoate-protein ligase TERM 76 71492 - 71444 - f 87 -11.4 -3.0976 | opp_overlap 71449, overlap 71436 71449 71486 TTTAATATTTTAATA TAAAACCTCTAATTTGATAAAA TTGTC TTATATCAAACTAGAGGTTTTT AATATTCTTGCATAT TERM 77 71487 - 71449 - f 100 -11.3 -4.67608 | opp_overlap 71449, overlap 71444 71486 TATTTTAATATAAAA CCTCTAATTTGATAAAA TTGTC TTATATCAAACTAGAGG TTTTTAATATTCTTG TERM 78 71449 - 71487 + F 100 -9.1 -4.93316 | opp_overlap 71449 71444 71486 TATTTTAATATAAAA CCTCTAATTTGATAAAA TTGTC TTATATCAAACTAGAGG TTTTTAATATTCTTG TERM 79 71680 - 71664 - f 82 -5.3 -5.45802 | TGGTTAAAATAAAAA TATTAAA AGT TTTAATA AATGATGGTTAAAAA ispD 71715 - 72428 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 72425 - 72910 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 80 73199 - 73232 + F 100 -14.1 -5.63645 | opp_overlap 73199 ACCGCGGAAATTAAA CCTTTCGTCTCTATA CTTG TATAGAGATGAGAGG TTTTTTATATTTTCA TERM 81 73232 - 73199 - f 86 -9.7 -4.06055 | opp_overlap 73199 ACCGCGGAAATTAAA CCTTTCGTCTCTATA CTTG TATAGAGATGAGAGG TTTTTTATATTTTCA TERM 82 73338 - 73313 - g 81 -8.3 -4.3467 | overlap 73317 ATGCCGACATTAAAA GAAATCCCAGC AGAT GCTGAGATTAC AAGCCATCAATTAAT TERM 83 73334 - 73317 - g 85 -7.7 -4.75288 | overlap 73313 CGACATTAAAAGAAA TCCCAGC AGAT GCTGAGA TTACAAGCCATCAAT TERM 84 73685 - 73669 - g 77 -8.1 -3.75015 | ACAATTGCCACTAAA CTTGTAT CAA ATACAAG TAAAATATAGAGACG proS 73277 - 74992 + | prolyl-tRNA synthetase TERM 85 75041 - 75076 + F 73 -3.5 -5.60993 | opp_overlap 75041 GTTGTACTTTATAGA CACCATTTTATCT ATATATAAGG ATATAAAATGGTG TTTTTTTATAAAACA CD0050 75114 - 76559 + | prolyl-tRNA synthetase TERM 86 76578 - 76610 + F 89 -4.4 -6.07374 | gap 2, opp_overlap 76578 76590, overlap 76582 ACATTTAAATAAAAA CTGGGGTAGAAAGTAT TTA ATACTTT--ATCCCAG TTTTTTGTTTTTTAT gltX 76997 - 78478 + | glutamyl-tRNA synthetase TERM 87 78508 - 78487 - f 77 -7.3 -4.45485 | opp_overlap 78487 ATTATAGTCATAAAA GTCCGCT AATTTAGA AGCGGAC TTTTTTTGTGTTAGT TERM 88 78487 - 78508 + F 95 -7.3 -5.82172 | opp_overlap 78487 ATTATAGTCATAAAA GTCCGCT AATTTAGA AGCGGAC TTTTTTTGTGTTAGT TERM 89 78830 - 78805 - f 72 -6.3 -4.41114 | opp_overlap 78805, overlap 78798 78806 78815 78816 TGATTACAGAAGAAA CTTTTGAAAAG TGCT CTTCTCAAAAA AAAATATTTTTAGAA cysS 78990 - 80396 + | cysteinyl-tRNA synthetase CD0053 80399 - 80794 + | hypothetical protein TERM 90 80805 - 80837 + F 100 -8.6 -5.64274 | opp_overlap 80803 80805 TGTAAATATTAAAGA GTGTTGTCTTAATA ATAAG TAATAAGGCAACAC TTTTTTTATAACTAA thyX 80900 - 81658 + | FAD-dependent thymidylate synthase CD0055 81662 - 82408 + | putative tRNA/rRNA methyltransferase CD0056 82411 - 82938 + | hypothetical protein sigH 82988 - 83650 + | RNA polymerase factor sigma-70 tufA 83724 - 84917 + | elongation factor Tu TERM 91 84973 - 84957 - f 72 -3.6 -5.3321 | opp_overlap 84957, overlap 84951 84948 AAGGAATAACAAAAA GAGGGG TTATG CTCCTC TTTTTTTAACATAGA TERM 92 84957 - 84973 + F 87 -6.5 -5.44119 | opp_overlap 84957 84951 84948 AAGGAATAACAAAAA GAGGGGT TAT GCTCCTC TTTTTTTAACATAGA rpmG 85167 - 85316 + | 50S ribosomal protein L33 secE 85342 - 85563 + | preprotein translocase SecE subunit TERM 93 86101 - 86085 - g 70 -8.1 -3.08508 | CATTTGGTAAAAGGA CTCTATT TGT AATAGAG CTTGAAGGTATAGAA nusG 85583 - 86125 + | transcription antitermination protein rplK 86164 - 86589 + | 50S ribosomal protein L11 rplA 86660 - 87358 + | 50S ribosomal protein L1 TERM 94 87493 - 87523 + F 90 -7.6 -4.98436 | opp_overlap 87493 ATTGAGATTACTAAA GCTTTTGATGTCTA CTT TTGGCAACAAAAGC TTTTTATAATGTTGC rplJ 87581 - 88087 + | 50S ribosomal protein L10 rplL 88144 - 88509 + | 50S ribosomal protein L7/L12 TERM 95 88538 - 88522 - f 77 -6.5 -4.57073 | opp_overlap 88522 TAGTTTCTTTAAAAA GATGCCC ATT GGGTATC TTTTTTTATTTATAA TERM 96 88522 - 88538 + F 100 -8.7 -6.02919 | opp_overlap 88522 TAGTTTCTTTAAAAA GATGCCC ATT GGGTATC TTTTTTTATTTATAA TERM 97 88774 - 88723 - f 95 -10.6 -4.128 | opp_overlap 88717 88736 88742, overlap 88731 88736 88742 ATGTCTATATATAAA GTATATAATTAAACTAAAATGTAA AATT TTACATTTTAGTTTAAAAAAATAC ACGAGTGTTTTATAA TERM 98 88766 - 88731 - f 100 -15.2 -3.675 | opp_overlap 88736 88742, overlap 88723 88736 88742 ATATAAAGTATATAA TTAAACTAAAATGTAA AATT TTACATTTTAGTTTAA AAAAATACACGAGTG TERM 99 88736 - 88761 + F 91 -10.7 -3.54424 | opp_overlap 88731 88723 88736 88742, overlap 88742 AAGTATATAATTAAA CTAAAATGTAA AATT TTACATTTTAG TTTAAAAAAATACAC TERM 100 88761 - 88736 - f 95 -10.7 -4.05848 | opp_overlap 88736 88742, overlap 88731 88723 88742 AAGTATATAATTAAA CTAAAATGTAA AATT TTACATTTTAG TTTAAAAAAATACAC TERM 101 88940 - 88923 - g 70 -4.1 -4.95876 | overlap 88924 AATTACAAGGAAAAA TTGCAGT AGTT ACTGCAG CAACAAAAGGTATTG TERM 102 88939 - 88924 - g 72 -7.6 -3.55899 | overlap 88923 ATTACAAGGAAAAAT TGCAGT AGTT ACTGCA GCAACAAAAGGTATT CD0065 88901 - 89689 + | NADP-dependent 7-alpha-hydroxysteroid dehydrogenase TERM 103 91056 - 91044 - g 82 -7.7 -4.47158 | AGAAGACATAATAAA TCCAG AAA CTGGA GAAGTATTTGTAAAA TERM 104 92907 - 92889 - g 81 -7.5 -4.57755 | opp_overlap 92898, overlap 92898 ATTTACTAGAGAAAA TGGAGAT GATTT ATCTCCA GGAGTAAATGAATTA rpoB 90160 - 93876 + | DNA-directed RNA polymerase subunit beta TERM 105 94919 - 94907 - g 70 -6.3 -4.07568 | TCGTTTCCGTCAAAA CTTAC TTG GTAAG CGTGTTGACTACTCA TERM 106 97168 - 97158 - g 72 -6.8 -4.13246 | GATGCTATAGATAAA GGTC TAA GACC AGCAGTTGCTAAAAG rpoC 93918 - 97403 + | DNA-directed RNA polymerase subunit beta' TERM 107 97476 - 97508 + F 73 -7.2 -4.18494 | gap 1, opp_overlap 97476 97479 GTGTGTTGTTTAAAA GTACACTAAGGGCTT GAAC AAGTTCTTAGTG-AC TTTTAGATGGCAATA rpsL 97692 - 98114 + | 30S ribosomal protein S12 rpsG 98238 - 98708 + | 30S ribosomal protein S7 TERM 108 99505 - 99495 - g 72 -5.4 -4.77165 | opp_overlap 99495 GTTGCTATAAGAAAA GCTA CTA TAGC TTGTGAAATGAACCC fusA 98757 - 100823 + | translation elongation factor G TERM 109 100896 - 100857 - f 79 -5 -5.59879 | opp_overlap 100870, overlap 100860 100863 TATAAATATAAAAAA TAATCAGCTAGATGAGAG ATAT CTCTCATCTAGCACAAGA TAAAGGGAGGAAATT TERM 110 100893 - 100860 - f 100 -11.1 -4.8277 | opp_overlap 100870, overlap 100857 100863 AAATATAAAAAATAA TCAGCTAGATGAGAG ATAT CTCTCATCTAGCACA AGATAAAGGGAGGAA TERM 111 100890 - 100863 - f 100 -17.2 -3.26205 | opp_overlap 100870, overlap 100860 100857 TATAAAAAATAATCA GCTAGATGAGAG ATAT CTCTCATCTAGC ACAAGATAAAGGGAG tufB 100916 - 102109 + | elongation factor Tu TERM 112 102145 - 102163 + F 100 -8.8 -6.07374 | opp_overlap 102145 TTTAATATAAAAAAA GAGGGGGG TAA CTCCTCTC TTTTTTGTTTTTTGT TERM 113 102163 - 102145 - f 82 -4.4 -5.80817 | opp_overlap 102145 TTTAATATAAAAAAA GAGGGGGG TAA CTCCTCTC TTTTTTGTTTTTTGT rpsJ 102481 - 102792 + | 30S ribosomal protein S10 rplC 102884 - 103513 + | 50S ribosomal protein L3 rplD 103513 - 104166 + | 50S ribosomal protein L4 rplW 104166 - 104456 + | 50S ribosomal protein L23 TERM 114 105190 - 105172 - g 71 -8.8 -2.76225 | AATGAACCCTAATGA CCATCCAC ACG GTGGAGGG GAAGGTAGATCTCCA rplB 104486 - 105316 + | 50S ribosomal protein L2 rpsS 105351 - 105632 + | 30S ribosomal protein S19 rplV 105664 - 105999 + | 50S ribosomal protein L22 rpsC 106022 - 106837 + | 30S ribosomal protein S3 rplP 106873 - 107304 + | 50S ribosomal protein L16 rpmC 107306 - 107509 + | 50S ribosomal protein L29 rpsQ 107533 - 107787 + | 30S ribosomal protein S17 rplN 107813 - 108181 + | 50S ribosomal protein L14 rplX 108202 - 108510 + | 50S ribosomal protein L24 rplE 108540 - 109082 + | 50S ribosomal protein L5 TERM 115 109178 - 109191 + G 72 -8.1 -3.36823 | opp_overlap 109178, overlap 109173 ACTAGATGTACTATA TGCGG AAGA CCGCA TTCAGTTTTGAAAAA rpsN 109100 - 109285 + | 30S ribosomal protein S14 rpsH 109318 - 109716 + | 30S ribosomal protein S8 rplF 109747 - 110289 + | 50S ribosomal protein L6 rplR 110325 - 110693 + | 50S ribosomal protein L18 TERM 116 110961 - 110939 - g 78 -9.2 -3.3167 | opp_overlap 110937, overlap 110937 AAGAAAAATCTAATA GTAGTGCCAA TAG TTGGGACTAC AATTCCTCACGAAGT rpsE 110714 - 111223 + | 30S ribosomal protein S5 rpmD 111238 - 111423 + | 50S ribosomal protein L30 TERM 117 111832 - 111816 - g 81 -8.1 -4.09108 | overlap 111831 GGTAATTTAGAGAAA GCTTTAA CTG TTAAAGC TGCTAAATTTACAGC rplO 111456 - 111899 + | 50S ribosomal protein L15 prlA 111943 - 113211 + | preprotein translocase SecY subunit adk 113228 - 113878 + | adenylate kinase TERM 118 114575 - 114563 - g 71 -7.7 -3.51573 | GATGGAAAAAAATCA GCTCA TTA TGAGC ATACGATAGCAATTA map1 113879 - 114625 + | methionine aminopeptidase CD0093 114638 - 114916 + | putative ribosomal protein infA 114954 - 115172 + | translation initiation factor IF-1 rpmJ 115208 - 115321 + | 50S ribosomal protein L36 rpsM 115474 - 115845 + | 30S ribosomal protein S13 rpsK 115881 - 116279 + | 30S ribosomal protein S11 TERM 119 116833 - 116810 - g 80 -9 -3.74184 | opp_overlap 116812, overlap 116802 AAGTTAACTCAAGAA TAGCTCCTAA GTGG TTAGAAGCTA ATGTAGAAGGAATGA rpsD 116311 - 116934 + | 30S ribosomal protein S4 TERM 120 116944 - 116963 + F 70 -5.2 -4.88918 | opp_overlap 116939 AAATAATAAGCACAC TTTTAAAA ATTA TTTTAAAA TTTTGTTTACCCTCA rpoA 117012 - 117959 + | DNA-directed RNA polymerase alpha chain TERM 121 118059 - 118039 - g 72 -7 -4.1822 | opp_overlap 118031 CCTTATGTTAAGAAA CTTAGTAA CTTGC TTACTAAG AAGTGGAAGAATAGA rplQ 117980 - 118321 + | 50S ribosomal protein L17 TERM 122 118322 - 118361 + F 91 -7.4 -5.47218 | opp_overlap 118331, overlap 118331 ATAGAATTAGTATAG TAAGGAAAGGATTAGGCT TGAT GGCTTAATCTTTTTTTTA TTTTTTTGACTAAGG TERM 123 118331 - 118352 + F 100 -5.9 -6.47325 | opp_overlap 118331, overlap 118322 GTATAGTAAGGAAAG GATTAGGCT TGAT GGCTTAATC TTTTTTTTATTTTTT CD0100 118441 - 119274 + | ABC transporter, ATP-binding protein CD0101 119262 - 120128 + | cobalt transporter ATP-binding subunit CD0102 120122 - 120925 + | ABC transporter, permease protein truA1 120957 - 121688 + | tRNA pseudouridine synthase 1 TERM 124 121787 - 121777 - f 70 -2.6 -5.49809 | TAAACGGTAAAAAAA TTTT ATG AAAA GTAGTTAAGGAGGGA rplM 121808 - 122239 + | 50S ribosomal protein L13 rpsI 122268 - 122660 + | 30S ribosomal protein S9 TERM 125 122782 - 122765 - f 73 -5.7 -4.87592 | TGATATATAATAAAA TAATAAG ATAT CTTATTA GGATGTTTTTCATTA TERM 126 122783 - 122809 + F 100 -10.3 -5.48213 | TAAGATATCTTATTA GGATGTTTTTC ATTAA GAAGAACATCC TTTTTATTTTGACTA TERM 127 123798 - 123787 - g 72 -4.4 -5.01811 | opp_overlap 123787 TTATCAAATGAAAAA GAGT GTAA ACTC TTAACTGATGAAACA cwlD 123166 - 123870 + | germination-specific N-acetylmuramoyl-L-alanine amidase TERM 128 123903 - 123943 + T 100 -8.5 -5.45802 | opp_overlap 123903 GTCTAAATATGTAAA TAGCTTGTATTAAAGCAGT TAA AATGCATTAATATAGGCTA TTTTTATTTTGACAA TERM 129 123974 - 123964 - T 70 -2.6 -5.61596 | overlap 123966 ATTTTGACAAAAAAA TATT TAA AATA AAAGTTAAAAAGTTG TERM 130 124306 - 124291 - T 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 131 124949 - 124961 + T 85 -10.5 -3.05463 | TGAGTACTAGGTGTC GGGGG TTA CCCCC TTCGGTGCCGCAGCT TERM 132 126455 - 126434 - T 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGCGGACATATC TERM 133 126619 - 126604 - T 81 -10.4 -2.71011 | overlap 126591 ACCCTGTGGGAAGCA GGAGGG ACCA CCCTCC AAGGCTAAATACTAC TERM 134 126692 - 126681 - T 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 135 129516 - 129500 - T 72 -8.7 -2.62616 | TCAGCTGGGAGAGCA CCTGCCT TAC AAGCAGG GGGTCACAGGTTCGA TERM 136 129951 - 129937 - T 70 -7.8 -3.322 | opp_overlap 129931 129937 AGCTGGATAGAGCAA CGCCCT TCT AAGGCG TGTGTCCGGGGTTCG TERM 137 130868 - 130852 - T 72 -8.7 -2.62616 | opp_overlap 130865, overlap 130865 TCAGTCGGTAGAGCA GGGGACT GAA AATCCCC GTGTCGGTGGTTCGA TERM 138 131253 - 131238 - T 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 139 131896 - 131908 + T 85 -10.5 -3.05463 | TGAGTACTAGGTGTC GGGGG TTA CCCCC TTCGGTGCCGCAGCT TERM 140 133402 - 133381 - T 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGCGGACATATC TERM 141 133566 - 133551 - T 81 -10.4 -2.71011 | overlap 133538 ACCCTGTGGGAAGCA GGAGGG ACCA CCCTCC AAGGCTAAATACTAC TERM 142 133639 - 133628 - T 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 143 136121 - 136104 - T 73 -5.7 -4.78764 | TAAACTTATTAAAAA CTTAATA GAAA TATTAAG CATAAAGATTATGTG TERM 144 136355 - 136318 - T 88 -6.5 -5.52986 | opp_overlap 136318 136323 ATTTGATGAAAAAAA TAAAAGACTTACTGATT TTTA AATCTATAGGTCTTTTA TTTTTTATCTAACAT TERM 145 136318 - 136355 + T 87 -6.5 -5.37043 | opp_overlap 136318, overlap 136323 ATTTGATGAAAAAAA TAAAAGACTTACTGATT TTTA AATCTATAGGTCTTTTA TTTTTTATCTAACAT aspC 137647 - 136463 - | aspartate aminotransferase TERM 146 137915 - 137939 + H 82 -5.7 -5.47399 | opp_overlap 137916 137917, overlap 137916 137917 GCAATTATTAAGATA ATCCCTTTAAC TTA GTTGAAGGGGA TTTTTTTAGACTTAA TERM 147 137916 - 137938 + H 86 -9.2 -3.87355 | opp_overlap 137916 137917, overlap 137915 137917 CAATTATTAAGATAA TCCCTTTAAC TTA GTTGAAGGGG ATTTTTTTAGACTTA TERM 148 137917 - 137937 + H 82 -10.5 -2.91328 | opp_overlap 137916 137917, overlap 137916 137915 AATTATTAAGATAAT CCCTTTAAC TTA GTTGAAGGG GATTTTTTTAGACTT nrdD 138020 - 140371 + | anaerobic ribonucleoside triphosphate reductase nrdG 140393 - 140932 + | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 149 140986 - 140935 - f 100 -17.2 -4.82819 | opp_overlap 140941 140945, overlap 140941 TATAGCAGAATAAAA TATAAATAAACAGGATTAAATATA TGCA TATATTTAATCCTGTTTATTTTCA TATAATATTTCAAGC TERM 150 140980 - 140941 - f 100 -18.4 -4.57514 | opp_overlap 140941 140945, overlap 140935 AGAATAAAATATAAA TAAACAGGATTAAATATA TGCA TATATTTAATCCTGTTTA TTTTCATATAATATT TERM 151 140941 - 140980 + F 100 -18.4 -4.38774 | opp_overlap 140935 140941, overlap 140945 AGAATAAAATATAAA TAAACAGGATTAAATATA TGCA TATATTTAATCCTGTTTA TTTTCATATAATATT TERM 152 140945 - 140976 + F 100 -14.8 -4.75288 | opp_overlap 140941 140935, overlap 140941 TAAAATATAAATAAA CAGGATTAAATATA TGCA TATATTTAATCCTG TTTATTTTCATATAA TERM 153 141306 - 141290 - f 74 -5.2 -5.19916 | opp_overlap 141300, overlap 141282 AAAAGATTTAAAAAA GTGTTT TAACT AAACAC ATAAGTGTTAAATTC TERM 154 141863 - 141848 - f 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 155 143951 - 143930 - f 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGCGGACATATC TERM 156 144115 - 144100 - f 81 -10.4 -2.71011 | overlap 144087 ACCCTGTGGGAAGCA GGAGGG ACCA CCCTCC AAGGCTAAATACTAC TERM 157 144188 - 144177 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 158 147318 - 147303 - f 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 159 147961 - 147973 + F 85 -10.5 -3.05463 | TGAGTACTAGGTGTC GGGGG TTA CCCCC TTCGGTGCCGCAGCT TERM 160 149345 - 149324 - f 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGCGGACATATC TERM 161 149509 - 149494 - f 81 -10.4 -2.71011 | overlap 149481 ACCCTGTGGGAAGCA GGAGGG ACCA CCCTCC AAGGCTAAATACTAC TERM 162 149582 - 149571 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 163 152026 - 152014 - f 72 -6.3 -4.46233 | opp_overlap 152013 152004 152014, overlap 152010 CTAACTCTAAAGAAA CTAGT ATT ACTAG ATTCTATAAACTTAT TERM 164 152065 - 152048 - f 73 -5.7 -4.78764 | TAAACTTATTAAAAA CTTAATA GAAA TATTAAG CATAAAGATTATGTG TERM 165 152675 - 152659 - f 72 -8.7 -2.62616 | TCAGCTGGGAGAGCA CCTGCCT TAC AAGCAGG GGGTCACAGGTTCGA TERM 166 152927 - 152913 - f 70 -7.8 -3.322 | opp_overlap 152907 152913 AGCTGGATAGAGCAA CGCCCT TCT AAGGCG TGTGTCCGGGGTTCG TERM 167 152963 - 152995 + F 95 -10.9 -3.54488 | opp_overlap 152963 152968, overlap 152968 CTGTGCGCTCATTAA GAAAAGTTTACTATA AAT TATAGTAAACTTTTA TATTGTTTAAAAAGA TERM 168 152995 - 152963 - f 90 -10.9 -3.14132 | opp_overlap 152963 152968, overlap 152968 CTGTGCGCTCATTAA GAAAAGTTTACTATA AAT TATAGTAAACTTTTA TATTGTTTAAAAAGA TERM 169 152968 - 152990 + F 100 -10.8 -4.84673 | opp_overlap 152963 152968, overlap 152963 CGCTCATTAAGAAAA GTTTACTATA AAT TATAGTAAAC TTTTATATTGTTTAA TERM 170 152990 - 152968 - f 100 -10.8 -4.71426 | opp_overlap 152968 152963, overlap 152963 CGCTCATTAAGAAAA GTTTACTATA AAT TATAGTAAAC TTTTATATTGTTTAA TERM 171 153009 - 153038 + F 100 -7.9 -5.38054 | opp_overlap 153009 TATATTGTTTAAAAA GACACAGGAAACA TGTA TATTACCTGTGTC TTTTTATTTATAAAC TERM 172 153038 - 153009 - f 100 -10.1 -4.59109 | opp_overlap 153009 TATATTGTTTAAAAA GACACAGGAAACA TGTA TATTACCTGTGTC TTTTTATTTATAAAC TERM 173 153681 - 153722 + F 81 -8.8 -3.89435 | opp_overlap 153688, overlap 153684 153688 TTAGAACATAAAACT GAATTAAGGCGCGAGTAC TATTTT GTATTCGCGCCTTGATGG TTTGAGTTATTTGAG TERM 174 153684 - 153719 + F 100 -14.9 -3.00451 | opp_overlap 153688, overlap 153681 153688 GAACATAAAACTGAA TTAAGGCGCGAGTAC TATTTT GTATTCGCGCCTTGA TGGTTTGAGTTATTT TERM 175 153715 - 153688 - f 93 -11.3 -3.46007 | opp_overlap 153684 153681 153688 ATAAAACTGAATTAA GGCGCGAGTAC TATTTT GTATTCGCGCC TTGATGGTTTGAGTT TERM 176 153688 - 153715 + F 100 -13.5 -3.33885 | opp_overlap 153688, overlap 153684 153681 ATAAAACTGAATTAA GGCGCGAGTAC TATTTT GTATTCGCGCC TTGATGGTTTGAGTT CD0110 153933 - 154772 + | hypothetical protein CD0111 154769 - 155950 + | hypothetical protein TERM 177 155998 - 156024 + G 75 -4.7 -5.12971 | opp_overlap 155997 156000, overlap 156000 TGCGACAAAAAAACC TATAAAATTAA GTTTG TTAATTTTATG TTTTTGTTGCATCTT CD0111A 155947 - 156066 + | hypothetical protein TERM 178 156386 - 156375 - g 83 -2.2 -5.86976 | CTAGAAAAGAAAAAA TAGC AAAT GCCA TTTTAGTAGGAGATA TERM 179 156961 - 156943 - g 75 -7.4 -4.04922 | overlap 156946 156960 ACATAAAGGTATAAA TCATCCTG TAG CAGGAAGA GCTGATATATTATTA ptb 156254 - 157156 + | phosphate butyryltransferase buk 157178 - 158257 + | butyrate kinase CD0114 158247 - 158924 + | putative ATP/GTP-binding protein TERM 180 159091 - 159081 - g 95 -6.8 -5.80003 | GTAATAAACAAAAAA GGGT ATA ACCC AGCAACTGTTTTTGA CD0115 158967 - 159182 + | ferredoxin CD0116 159211 - 160290 + | 2-ketoisovalerate ferredoxin reductase CD0117 160290 - 161042 + | putative subunit of oxidoreductase CD0118 161043 - 161600 + | putative subunit of oxidoreductase TERM 181 161648 - 161625 - f 100 -11.2 -5.79526 | opp_overlap 161625 AGATGTCAAAAAAAA GACAATAGAA TTAT TTCTATTGTC TTTTTTGCTGATAAG TERM 182 161625 - 161648 + F 100 -11.2 -5.1861 | opp_overlap 161625 AGATGTCAAAAAAAA GACAATAGAA TTAT TTCTATTGTC TTTTTTGCTGATAAG CD0119 161710 - 163116 + | phosphoglucomutase/phosphomannomutase mutase glmS 163383 - 165215 + | glucosamine--fructose-6-phosphate aminotransferase (isomerizing) TERM 183 165258 - 165289 + F 70 -3.8 -5.09895 | ATTTATTGAAAAGAA CTCATCCTGTTA TTTGTATT TTATAGGATGAG TTTTTTAGATAAATA CD0121 165666 - 166961 + | putative thiosulfate sulfurtransferase TERM 184 167344 - 167331 - f 72 -3.9 -5.36364 | opp_overlap 167331, overlap 167323 TGAAAAATACAAAAA TGTAT AAAA ATACA TATTGAGAAAGTATA CD0122 167424 - 168161 + | hypothetical protein TERM 185 169170 - 169155 - g 70 -6.2 -4.0641 | opp_overlap 169155 169154 GTGTAGTTATAGAAA CTGTTT TTGA AAACAG ATTTATGCATGTTGC murA 168164 - 169435 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 186 170152 - 170126 - g 72 -5.3 -4.72986 | opp_overlap 170144, overlap 170144 CATCTTCAGGAAAAA CAGAAAATAGT GAAGA AGTATTTTCTG CAAAATATCCTTATT spoIIC 169522 - 170586 + | stage II sporulation protein D CD0125 170652 - 171320 + | putative cell wall endopeptidase TERM 187 171324 - 171361 + F 100 -13.1 -5.38348 | opp_overlap 171323 171324 171326 171329 CTAATTAAGTAATAG TATAACAAGTTTAATCA TATT TGGTTAAGCTTGTTATA TTTTTTGGTGTTTTT TERM 188 171361 - 171324 - f 72 -8.7 -2.57354 | opp_overlap 171324, overlap 171323 171326 171329 CTAATTAAGTAATAG TATAACAAGTTTAATCA TATT TGGTTAAGCTTGTTATA TTTTTTGGTGTTTTT spoIIID 171418 - 171678 + | stage III sporulation protein D TERM 189 171692 - 171674 - f 90 -6 -5.82172 | opp_overlap 171675, overlap 171675 AGGAACATAAAAAAA TGTAGGTT AAA AACCTACT TTTTTTATTGAATTA TERM 190 171691 - 171675 - f 86 -9.5 -4.06863 | opp_overlap 171675, overlap 171674 GGAACATAAAAAAAT GTAGGTT AAA AACCTAC TTTTTTTATTGAATT TERM 191 171675 - 171691 + F 100 -9.5 -5.83226 | opp_overlap 171674 171675 GGAACATAAAAAAAT GTAGGTT AAA AACCTAC TTTTTTTATTGAATT mreB1 171875 - 172894 + | rod shape-determining protein fabZ 172910 - 173338 + | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase TERM 192 173363 - 173408 + T 100 -15.1 -4.96848 | opp_overlap 173363 ATATAAAAGTAAAAA GGTAGATAATTTGGAGTATTT AATC AGATACTCTAAAATATCTACC TTTTTATATAAAGAA TERM 193 173408 - 173363 - T 100 -10.7 -5.15526 | opp_overlap 173363 ATATAAAAGTAAAAA GGTAGATAATTTGGAGTATTT AATC AGATACTCTAAAATATCTACC TTTTTATATAAAGAA CD0129 173976 - 173449 - | hypothetical protein TERM 194 174302 - 174282 - H 72 -8.3 -3.2396 | opp_overlap 174282 AATTACGATTATTAA CCTCTTCTT ATA AAGGAGAGG TTTTTTTATTTTGAG TERM 195 174282 - 174302 + H 100 -10.5 -6.09196 | opp_overlap 174282 AATTACGATTATTAA CCTCTTCTT ATA AAGGAGAGG TTTTTTTATTTTGAG metE 174387 - 175580 + | S-adenosylmethionine synthetase TERM 196 175595 - 175632 + F 100 -13.7 -5.45652 | opp_overlap 175595 ATTTTTAACTAAAAA GCTGTTAGAATGTAATT TTAC GATTACTTTCTAACAGC TTTTTTATTAGGAGT TERM 197 175632 - 175595 - f 100 -13 -4.86621 | opp_overlap 175595 ATTTTTAACTAAAAA GCTGTTAGAATGTAAT TTTACG ATTACTTTCTAACAGC TTTTTTATTAGGAGT CD0131 175896 - 176993 + | hypothetical protein TERM 198 177093 - 177066 - f 73 -7.9 -3.68908 | gap 1, opp_overlap 177066 AAATAGCTATTTAAA TATGGTACC-TG TATTT CATGGTACCATA TTTTATGGATGCAGA TERM 199 177066 - 177093 + F 81 -7.9 -4.42386 | gap 1, opp_overlap 177066 AAATAGCTATTTAAA TATGGTACC-TG TATTT CATGGTACCATA TTTTATGGATGCAGA CD0132 177257 - 179476 + | putative DNA-binding protein TERM 200 179884 - 179866 - g 78 -4 -5.39681 | ATAATGAAAGAAAAA TTATATTT AGA AAACATAA AATTTGATTATATAT CD0133 179479 - 180261 + | putative phosphoribosyl transferase (putative competence protein) TERM 201 180520 - 180560 + F 78 -9.4 -2.96984 | gap 1, opp_overlap 180512 180527, overlap 180527 AGCTAAATATCATAT TAAAAGAGAGCTA-GCATA CCTT TATGTATAGCTCTTTTTTA TATATAATAAATTTA TERM 202 180527 - 180553 + F 81 -5.3 -5.43414 | gap 1, opp_overlap 180527 180512, overlap 180520 TATCATATTAAAAGA GAGCTA-GCATA CCTT TATGTATAGCTC TTTTTTATATATAAT TERM 203 182264 - 182252 - g 70 -6.3 -4.11751 | ACCAATGTTGGAAAA GGAAT ATT ATTCC CTCATGGAGACATGA TERM 204 182284 - 182304 + G 70 -6.3 -4.11484 | opp_overlap 182284 182286, overlap 182286 TGGAGACATGAAATA TATAAAACA ATC TGTTTTATG TTTTGCAAGGTTAAA CD0134 180593 - 182506 + | putative transcription antiterminator TERM 205 182527 - 182567 + F 100 -7.7 -6.23317 | opp_overlap 182530 182538, overlap 182529 182530 ATAGTGAACTATGGA TAAGCACAAAATTTTCCAT GTG ATGGAAAAAGTTGTGCATG TTTTTTTGTTTTTAT TERM 206 182529 - 182565 + F 85 -8.1 -4.70159 | opp_overlap 182530 182538, overlap 182527 182530 AGTGAACTATGGATA AGCACAAAATTTTCCAT GTG ATGGAAAAAGTTGTGCA TGTTTTTTTGTTTTT TERM 207 182564 - 182530 - f 95 -11.6 -3.39595 | opp_overlap 182529 182527 182530, overlap 182538 GTGAACTATGGATAA GCACAAAATTTTCCAT GTG ATGGAAAAAGTTGTGC ATGTTTTTTTGTTTT TERM 208 182530 - 182564 + F 95 -11.6 -3.36605 | opp_overlap 182530 182538, overlap 182529 182527 GTGAACTATGGATAA GCACAAAATTTTCCAT GTG ATGGAAAAAGTTGTGC ATGTTTTTTTGTTTT TERM 209 182556 - 182538 - f 89 -9 -4.58466 | opp_overlap 182530 182529 182527, overlap 182530 TGGATAAGCACAAAA TTTTCCAT GTG ATGGAAAA AGTTGTGCATGTTTT CD0135 182647 - 182955 + | PTS system, IIA component CD0136 182979 - 183305 + | PTS system, IIB component CD0137 183344 - 184678 + | PTS system, IIC component TERM 210 184823 - 184841 + G 74 -6.1 -4.38712 | opp_overlap 184801 184826 ATTTTTAAATGAATC TAAGGTA ATAGC TACCTTA TTTTGTGGGGATGAA CD0138 184689 - 185207 + | hypothetical protein CD0139 185303 - 186262 + | glycosylasparaginase TERM 211 186398 - 186420 + G 77 -7.7 -4.07687 | opp_overlap 186398 ATACCTAGTGTCAAA GGGGAGTCA GAAAA TGGCTTCCC TTTTGGCGAAAAAGT CD0140 186311 - 187363 + | putative peptidase CD0141 187366 - 188040 + | putative copper homeostasis protein CD0142 188593 - 189144 + | putative RNA-binding protein TERM 212 189169 - 189195 + F 100 -12.5 -4.76892 | opp_overlap 189166 189169 GATTTAATCATATTA GCTATCGATAA ATAAA TTATCGATAGC TTTTTAAATTAATAT TERM 213 189195 - 189169 - f 88 -12.5 -2.7044 | opp_overlap 189169, overlap 189166 GATTTAATCATATTA GCTATCGATAA ATAAA TTATCGATAGC TTTTTAAATTAATAT secA1 189276 - 191951 + | preprotein translocase SecA subunit TERM 214 192160 - 192150 - g 70 -4 -4.87892 | CTTCAAGAAAATAAA TCTT TAA AAGA GACATTAGAAGAATA TERM 215 192491 - 192479 - g 75 -9.1 -2.96585 | overlap 192474 AGATATAATATCAGA CCCTG AAG CAGGG ATAAAGACAGCTACA prfB 192087 - 193073 + | peptide chain release factor 2 TERM 216 193133 - 193174 + F 93 -8.7 -4.85396 | opp_overlap 193138, overlap 193142 CTTAATATGCACTTA CAGCACTTAGGCTGAGG ACGATAAC CCTCAGCCTTCGTTCTG TTTTGTTATACTTAT TERM 217 193142 - 193165 + F 83 -9.6 -3.62613 | opp_overlap 193138, overlap 193133 CACTTACAGCACTTA GGCTGAGG ACGATAAC CCTCAGCC TTCGTTCTGTTTTGT TERM 218 194093 - 194076 - g 70 -5.6 -4.22009 | ATCATTTAACAGAAA TAGCTC AAGAAA GAGCTA TAAGTGTATTTGGAA CD0145 193208 - 195358 + | putative RNA-binding protein CD0146 195506 - 196672 + | putative amidohydrolase TERM 219 196893 - 196928 + F 100 -12.2 -4.7254 | gap 1, opp_overlap 196901, overlap 196901 TGTTTAAACTATATC CATAAAAACTCGAAGAT AGG GTCTTCGAGTTTTT-TG TTTTTCCTAAAAAAT TERM 220 196921 - 196901 - f 100 -9.8 -4.89852 | opp_overlap 196893 196901 CTATATCCATAAAAA CTCGAAGA TAGGG TCTTCGAG TTTTTTGTTTTTCCT TERM 221 196901 - 196921 + F 100 -10.5 -5.95286 | opp_overlap 196901, overlap 196893 CTATATCCATAAAAA CTCGAAGAT AGG GTCTTCGAG TTTTTTGTTTTTCCT CD0147 197001 - 197579 + | putative riboflavin transporter TERM 222 197943 - 197927 - g 71 -2.4 -5.47821 | ATTTATCTAAAAAAA TAAAAA AATTA TTTTTA GATGATAAAGGGTAT CD0148 197908 - 198948 + | hypothetical protein CD0149 199087 - 199539 + | putative ATP/GTP hydrolase CD0150 199539 - 200255 + | putative glycoprotease rimI 200245 - 200721 + | putative ribosomal-protein-alanine acetyltransferase gcp 200727 - 201743 + | glycoprotease TERM 223 201916 - 201936 + F 72 -4.1 -5.36441 | CAGATTGTCTTTGGC TTAGATTTG CTT CAAGTTTAA TTTTTTCTATAGAAA TERM 224 201968 - 201980 + F 100 -7.7 -6.00814 | opp_overlap 201968 201967 ATTATTTTAAAAAGT GGGTA ATA TACCC TTTTTTTTCATTCTT hpdB 202040 - 204748 + | 4-hydroxyphenylacetate decarboxylase, catalytic subunit hpdC 204752 - 205009 + | 4-hydroxyphenylacetate decarboxylase, regulatory subunit hpdA 205002 - 205952 + | 4-hydroxyphenylacetate decarboxylase, activating subunit TERM 225 205980 - 206010 + F 87 -6.9 -5.43487 | opp_overlap 205980 GTTTTAATTAAAAAA GGATGTTACACTA AAAGC TAGAGTTACATCC TTTTTTATGTGGTTT TERM 226 206010 - 205980 - f 93 -7.6 -5.26875 | opp_overlap 205980 GTTTTAATTAAAAAA GGATGTTACACTAA AAG CTAGAGTTACATCC TTTTTTATGTGGTTT CD0156 206267 - 207229 + | putative membrane-associated CAAX amino terminal protease TERM 227 207354 - 207297 - f 72 -9.1 -2.64274 | gap 1, opp_overlap 207300 207311, overlap 207311 ATTGTTGGAAATTTA CAAAAATATAAAAATAACTTGGA-TA TTCTATT TACTCCAAGTTATTTTTATATTCTTT TGTAAATAGAAATGG TERM 228 207300 - 207351 + F 82 -8.6 -4.42386 | gap 1, opp_overlap 207297 207311, overlap 207311 GTTGGAAATTTACAA AAATATAAAAATAACTTGGA-TA TTCTATT TACTCCAAGTTATTTTTATATTC TTTTGTAAATAGAAA TERM 229 207340 - 207311 - f 70 -3.1 -5.38398 | gap 1, opp_overlap 207311 207300, overlap 207297 ACAAAAATATAAAAA TAACTTGGA-TA TTCTATT TACTCCAAGTTA TTTTTATATTCTTTT TERM 230 208045 - 208035 - f 73 -2.6 -5.74288 | ATAAATAAGAAAAAA TAAT ATG ATTA GTGAATAAAATTCAT TERM 231 208533 - 208547 + F 71 -5.8 -4.67968 | opp_overlap 208494, overlap 208541 TCTATATTTTTATTA TCTTTT TGT AAAAGA TTTATTATTTATTGC CD0159 209440 - 209907 + | putative glyoxalase TERM 232 209953 - 209990 + F 100 -11.6 -5.69262 | opp_overlap 209951 209950 GTATAGAAGTAAGGG CTGTAAGTAAACTTGT ATGGAA ACAAATTTACTTACAG TTTTTGTTTTTGTAA CD0160 211074 - 211787 + | putative two-component response regulator TERM 233 211804 - 211827 + F 72 -8.4 -3.18386 | overlap 211819 GTAAATTTTTGCCTT TATATTCTAT TCTA ATAGAATATA TCTATTGTAAAATAT CD0161 212060 - 213832 + | putative lantibiotic ABC transporter,ATP-binding protein TERM 234 214571 - 214561 - g 72 -4 -5.14563 | TGTTGTATTAAAAAA TGTA CGT TACA TAAAAAATAAATATC CD0162 213854 - 215275 + | radical SAM-family protein CD0163 215304 - 216374 + | hypothetical protein TERM 235 216578 - 216568 - g 76 -5.4 -5.09762 | ACTTTAATATAAAAA TTCC AGA GGAA AAACTTTTGAATAGG CD0163A 216390 - 216641 + | hypothetical protein CD0163B 216692 - 216895 + | hypothetical protein TERM 236 217332 - 217320 - f 70 -3.5 -5.32882 | opp_overlap 217320 TATTATTATAAAAAA TAAAT ATT ATTTA TTTTAGATTTTAGAA TERM 237 217527 - 217509 - g 90 -6.1 -5.5112 | TGCAGTAAGAAAAAA TGCTATA GGGAT TATAGCA GCAGGTATAGCATTA CD0164 217381 - 217674 + | hypothetical protein TERM 238 217724 - 217759 + T 83 -3.6 -5.90231 | gap 1 GTTTATATAAAAAAA TTGTAGATAAATTTTAT AAA ATAGT-TTTATCTACAA TTTTTTTATATTTAT CD0165 219155 - 217806 - | putative amino acid transporter TERM 239 218209 - 218222 + g 74 -5.3 -4.94811 | ATTATTATTGCTACA TATGG AGCA CCATA TTTATTTGTTTTTCC TERM 240 218935 - 218914 - G 71 -5.9 -4.44974 | opp_overlap 218931, overlap 218915 TCAAATCCTATAAAA TCTCCAAAA GCTT TTTTGGAGT ATAGATATGCTCCTC TERM 241 218934 - 218915 - G 78 -9.4 -3.26262 | opp_overlap 218931, overlap 218914 CAAATCCTATAAAAT CTCCAAAA GCTT TTTTGGAG TATAGATATGCTCCT CD0166 220412 - 219192 - | putative amidohydrolase/peptidase TERM 242 219378 - 219360 - G 73 -3.9 -5.26119 | TGTGTAAAAAGAAAA GTCTTCA CCACC TAAAGAC GGGTTTGGTCTCAAT CD0167 222793 - 220781 - | putative sigma-54-dependent transcriptional regulator TERM 243 222883 - 222928 + H 77 -7.4 -4.3953 | gap 3, opp_overlap 222883, overlap 222887 TTATCAAATAAAAAA GAAAGTGTCTATAATG--ACTTT ATA AAAGTTGCATTA-AGACACTTTC TTTCTTATAATTAAA TERM 244 222928 - 222883 - H 93 -7.4 -5.68438 | gap 3, opp_overlap 222883 222887 TTATCAAATAAAAAA GAAAGTGTCTATAATG--ACTTT ATA AAAGTTGCATTA-AGACACTTTC TTTCTTATAATTAAA TERM 245 223056 - 223043 - H 70 -2.5 -5.51402 | opp_overlap 223043 ATACACCCAAAAAAA TTTAT TTTA ATAAA TTCTATTGATAATAT CD0168 223261 - 223914 + | putative cyclic nucleotide-binding protein CD0169 225429 - 224053 - | putative drug/sodium antiporter CD0170 227358 - 225445 - | putative ABC transporter, ATP-binding protein CD0171 227494 - 228126 + | redox-sensing transcriptional repressor Rex TERM 246 228175 - 228204 + F 89 -8.7 -4.66953 | opp_overlap 228175 AAGAGTATTGAGAAA GTCAGAAGATTTA ATAT TAAATCCTCTGGC TTTTTGAAATATTAG TERM 247 228204 - 228175 - f 81 -8.7 -3.94811 | opp_overlap 228175 AAGAGTATTGAGAAA GTCAGAAGATTTA ATAT TAAATCCTCTGGC TTTTTGAAATATTAG CD0172 228265 - 228804 + | hypothetical protein TERM 248 228961 - 228926 - T 70 -4.2 -4.9755 | gap 1, opp_overlap 228926 ATACATAATTAAAAA GAGGCTGATTAGTATTT ATA AAATAA-AATCAGTCTC TTTATGAATAACGAA fdxA 229150 - 228980 - | ferredoxin TERM 249 230161 - 230149 - g 81 -4.9 -5.38047 | TATCCAGATAAAAAA CAAAA AGA TTTTG CTCATTATGCTATAG CD0173 229435 - 230502 + | putative lipoprotein TERM 250 230532 - 230517 - f 85 -3.4 -6.17292 | opp_overlap 230512 230517 AAATGTAAAAAAAAA TAAATA TATA TATTTA TTTTAATAATTTATA CD0174 230672 - 232573 + | putative oxidoreductase, acetyl-CoA synthase subunit CD0175 232566 - 233039 + | putative oxidoreductase, electron transfer subunit CD0176 233014 - 234240 + | putative oxidoreductase, NAD/FAD binding subunit CD0177 235566 - 234379 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 251 235522 - 235510 - G 77 -7.7 -4.06562 | opp_overlap 235509 AAGCCTAACTAGAAA TGGTG TTT CACCA AATTTCTCTAAATAG TERM 252 236096 - 236078 - g 74 -3.2 -5.47846 | opp_overlap 236080, overlap 236080 AATTAAAAAAGAAAA TATAAGAA AAA TTCTTATT ATTGGGACATCAAAA TERM 253 236094 - 236080 - g 70 -5.8 -4.32882 | opp_overlap 236080, overlap 236078 TTAAAAAAGAAAATA TAAGAA AAA TTCTTA TTATTGGGACATCAA CD0178 235839 - 236663 + | putative ATP-binding protein TERM 254 237023 - 237005 - g 73 -6 -4.64676 | overlap 237007 GTAGGGCCAACAAAA GGTGGAAT AAG ATTCCATC AAAATGTTTCAAGAG TERM 255 237438 - 237428 - g 79 -5.4 -5.25893 | opp_overlap 237428 ATAGATATGAAAAAA GCTA AAA TAGC TGTTCAAGGTATAGG gluD 236792 - 238057 + | NAD-specific glutamate dehydrogenase TERM 256 238100 - 238130 + F 79 -9 -3.551 | opp_overlap 238104 238105, overlap 238105 TAATTATTTAAGATA TAAAGGGGCTGTAC ATA GTACAGCCCTTAAA TTATGTGGCTTACAA TERM 257 238126 - 238104 - f 100 -12 -4.21811 | opp_overlap 238100 238105, overlap 238105 TATTTAAGATATAAA GGGGCTGTAC ATA GTACAGCCCT TAAATTATGTGGCTT TERM 258 238105 - 238125 + F 100 -15.5 -3.26717 | opp_overlap 238104 238105, overlap 238100 ATTTAAGATATAAAG GGGCTGTAC ATA GTACAGCCC TTAAATTATGTGGCT TERM 259 238125 - 238105 - f 100 -15.5 -3.12364 | opp_overlap 238105 238100, overlap 238104 ATTTAAGATATAAAG GGGCTGTAC ATA GTACAGCCC TTAAATTATGTGGCT TERM 260 238136 - 238157 + F 79 -5.2 -5.49568 | overlap 238138 AGCCCTTAAATTATG TGGCTTAC AATGAA GTAAGCTA TTTTTGTTTTAACTT TERM 261 238426 - 238414 - g 75 -4.9 -5.04385 | GAGAGTTTTAAAAAA TTGTA CTG TACAA CAAAAGCAAGAATAT CD0180 238355 - 238858 + | hypothetical protein TERM 262 238868 - 238856 - f 79 -4.9 -5.47821 | opp_overlap 238856 ATGGATTTAAAAAAA TAAGT TAG ACTTA ATATTGATGTTGATA CD0181 239189 - 240322 + | putative membrane-associated metalloprotease TERM 263 240730 - 240774 + G 100 -10.5 -4.96106 | opp_overlap 240730 TATTATCTAAAAAAA TTAAGTATGAAAAGATT ACTGCTAGGAC AATCTTTTCATACTTAA TTTTTAATATTTATA TERM 264 240774 - 240730 - g 100 -11.9 -5.48825 | opp_overlap 240730 TATTATCTAAAAAAA TTAAGTATGAAAAGATTAC TGCTAGG ACAATCTTTTCATACTTAA TTTTTAATATTTATA CD0182 240564 - 240839 + | hypothetical protein TERM 265 240935 - 240913 - f 78 -5.6 -5.19261 | AAATCCATCAAAAAA TATACGCCCT ATA AAAGCGCATA AAAAAACACATAAAA TERM 266 240963 - 240942 - f 79 -3.8 -5.63504 | AAGCGCATAAAAAAA CACATAAA ACAATA TTTATGCG CACTTTAACCTCGAA TERM 267 241813 - 241801 - g 72 -6.3 -4.29396 | AAGTATTGACCAAAA TGTAG ATT CTACA AATAATAATCAACAA CD0183 241238 - 242260 + | putative cell wall hydrolase TERM 268 242655 - 242641 - g 70 -5 -4.63089 | TAGCTCAAAAAATAA TTGACA ATC CGTCAA AATATTCTCGTATAT TERM 269 243104 - 243092 - g 75 -4.9 -5.10064 | opp_overlap 243092, overlap 243086 GGCAAGATATAAAAA TACAA AGT TTGTA TTTATAGCGCCTGAA pyrB 242556 - 243476 + | aspartate carbamoyltransferase catalytic chain pyrK 243515 - 244207 + | dihydroorotate dehydrogenase electron transfer subunit pyrD 244200 - 245102 + | dihydroorotate dehydrogenase 1B TERM 270 245679 - 245667 - g 74 -6.3 -4.39426 | opp_overlap 245667 TATAGTGCTATAAAA CTTGA TAT TCAAG TTTATGAATCTGATG pyrE 245187 - 245771 + | orotate phosphoribosyltransferase TERM 271 245863 - 245891 + F 95 -6.1 -6.09888 | CTTAAAAATAAAAAG CAGTTAGCCTT ATAAATG AAGGTTAGCTG TTTTTTTTGTTAAAA CD0188 245986 - 246912 + | putative ketopantoate reductase CD0189 247854 - 246964 - | LysR family transcriptional regulator TERM 272 247289 - 247318 + g 71 -7.4 -3.745 | TCCCTGACTATCCAT TTTTGGTTTTGA AGTTTA TCAAAACTAAAA TCTTTTAATAAATGA TERM 273 247797 - 247807 + g 72 -4 -5.0916 | TTAAATATTCCCCAG CTTT AGT AAAG TTTTTGTATTCAACA TERM 274 248199 - 248209 + G 70 -5.4 -4.65895 | TTTTAGGTATGTTTG TAGG AAA CCTA TTTTTAAATCAAAAG CD0190 248042 - 249073 + | hypothetical protein TERM 275 249195 - 249152 - f 100 -10 -5.7827 | opp_overlap 249152 AATATAAATAAAAAA TGAATTTCGATAAGTTTA AGTGGGTA TAAACTTATAGAAATTCA TTTTTTATTTAAGGT TERM 276 249152 - 249195 + F 100 -10 -5.64421 | opp_overlap 249152 AATATAAATAAAAAA TGAATTTCGATAAGTTTA AGTGGGTA TAAACTTATAGAAATTCA TTTTTTATTTAAGGT CD0191 249367 - 250242 + | putative DNA glycosylase (DNA repair protein) cls 250260 - 251750 + | cardiolipin synthetase TERM 277 251836 - 251804 - f 75 -7.9 -3.87104 | GGTATATTATAATAA TTGTTAGCACTCTAT TAG ATAGAGTGATAATAA ATAAAAAGTATATAT groES 251943 - 252227 + | 10 kDa chaperonin TERM 278 253005 - 252991 - g 82 -7.2 -4.8143 | TCAACAAGGTAAAAA GCTATT GAT AATAGC TGAAGATGTAGAAGG groEL 252260 - 253888 + | 60 kDa chaperonin TERM 279 253923 - 253966 + F 100 -16.4 -4.6645 | opp_overlap 253923 AAATTTTAATATAAA GAACTATTTCGACTTAGATT TTAA ACTCTAAGTTGAAATAGTTC TTTTGTATATATCTA TERM 280 253966 - 253923 - f 100 -14.2 -4.22041 | opp_overlap 253923 AAATTTTAATATAAA GAACTATTTCGACTTAGATT TTAA ACTCTAAGTTGAAATAGTTC TTTTGTATATATCTA CD0195 254150 - 254890 + | hypothetical protein TERM 281 256229 - 256217 - f 80 -3.5 -5.88197 | GTAAACAGAAAAAAA TATAT AAA ATATA AACTCACTCGTATAT guaA 256539 - 258074 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 282 258194 - 258224 + F 100 -12.7 -5.70761 | opp_overlap 258194 258197 TTAATAAGCAAAAAA CATCCTGCTGAAT GATAA ATTCAGCGGGGTG TTTTTATTTTGTTTT TERM 283 258224 - 258194 - f 100 -8.3 -5.37865 | opp_overlap 258194, overlap 258197 TTAATAAGCAAAAAA CATCCTGCTGAAT GATAA ATTCAGCGGGGTG TTTTTATTTTGTTTT TERM 284 258221 - 258197 - f 72 -8.6 -3.15885 | opp_overlap 258194, overlap 258194 ATAAGCAAAAAACAT CCTGCTGAAT GATAA ATTCAGCGGG GTGTTTTTATTTTGT CD0199 258653 - 260044 + | putative membrane-associated nucleotidase CD0200 260500 - 260192 - | LysR family transcriptional regulator CD0201 260537 - 261058 + | putative chromate transporter TERM 285 261071 - 261083 + T 73 -2 -5.80248 | TAAGTTTTTGGTAAG TAGA GGATA TCTA TTTTTTTATATCTTA CD0202 262020 - 261187 - | hypothetical protein CD0203 265633 - 262205 - | putative DNA repair protein TERM 286 262793 - 262805 + g 72 -4.7 -4.87626 | overlap 262794 TAATCCTTGACAGTT TGGGC ATT GCCCC TTTTTGCTATTAAAG TERM 287 262794 - 262804 + g 73 -8.2 -3.51853 | overlap 262793 AATCCTTGACAGTTT GGGC ATT GCCC CTTTTTGCTATTAAA TERM 288 263003 - 263017 + g 76 -3.6 -5.34381 | overlap 263005 AAATTCAGTATAATT TTTATC TGG GATAGA TTTTTGTTTCAATTT CD0204 265952 - 268186 + | putative signaling protein TERM 289 268208 - 268239 + F 90 -6.8 -5.76237 | opp_overlap 268208 AAGATAAAAAATTTA GGCAAGTTATAT AATTAAAA ATATAACTTGTC TTTTTTATTTATATA CD0205 268442 - 270472 + | putative transcription antiterminator CD0206 270469 - 270921 + | PTS system, IIA component CD0207 270923 - 271978 + | putative fructose-like permease EIIC subunit 2 CD0208 272045 - 272353 + | putative fructose-like phosphotransferase EIIB subunit 2 TERM 290 272768 - 272753 - g 72 -9 -2.91912 | TTATTTATGTAGAGA CCATGG TGGG CCATGG CAAAGAGATAAAGAG CD0209 272457 - 273722 + | putative sugar-phosphate kinase CD0210 273810 - 274523 + | putative hydrolase TERM 291 274649 - 274620 - f 86 -9.6 -3.88291 | opp_overlap 274608 274620 GATTATTTGGAGAAA TACTTTAATATC AAAAAA GATATTAAAGTA TTTTTTGATTTAAAA TERM 292 274620 - 274649 + F 100 -9.6 -5.37593 | opp_overlap 274620, overlap 274608 GATTATTTGGAGAAA TACTTTAATATC AAAAAA GATATTAAAGTA TTTTTTGATTTAAAA TERM 293 274835 - 274821 - f 70 -2.9 -5.50774 | TAGAATAAATAAAAA TAAAC ATTAG GTTTA AAATGAAATTTAATA TERM 294 275546 - 275534 - g 72 -4.9 -4.8622 | TGTTGTAATGAAAAA TAAAG ATG CTTTA AATATGTACATTCAG licC 274956 - 275681 + | CTP:phosphocholine cytidylyltransferase TERM 295 276869 - 276859 - g 89 -4 -5.88471 | GATTATGAAAAAAAA TGAA TAT TTCA CTGCAAATATAAGTG TERM 296 277310 - 277329 + G 78 -4.4 -5.46657 | opp_overlap 277327 TCAGATCATGGAGCT TCATTTTT AGGT AAAGATGA TTTTTTATTAAAATC CD0212 275699 - 277762 + | putative choline sulfatase TERM 297 277904 - 277894 - T 81 -5.4 -5.36441 | opp_overlap 277894 277895, overlap 277895 TTTTTACACAAAAAA TGAG ATA CTCA AATTTTTATTTTGAG TERM 298 277895 - 277926 + T 90 -6.8 -5.64304 | gap 1, opp_overlap 277894 277895, overlap 277894 TTTTACACAAAAAAT GAGATA-CTCAAATT TTT ATTTTGAGATATCTC TTTTTTGTTATATTA CD0213 278279 - 277986 - | putative spore coat protein CD0214 278500 - 278285 - | hypothetical protein CD0215 278948 - 279346 + | transposase CD0216 279343 - 280506 + | transposase TERM 299 280730 - 280689 - T 81 -8.9 -3.90291 | opp_overlap 280694, overlap 280694 AGGTGTTTAATCAAA GTTAATGCCTTTAGAATAC AAAT GTATTCTAAAGGCATTTTT ACTATGTATTTTCAT TERM 300 280725 - 280694 - T 100 -17.6 -3.33399 | opp_overlap 280694, overlap 280689 TTTAATCAAAGTTAA TGCCTTTAGAATAC AAAT GTATTCTAAAGGCA TTTTTACTATGTATT TERM 301 280694 - 280725 + T 100 -17.6 -4.87037 | opp_overlap 280689 280694 TTTAATCAAAGTTAA TGCCTTTAGAATAC AAAT GTATTCTAAAGGCA TTTTTACTATGTATT TERM 302 280776 - 280789 + T 70 -3.9 -5.13722 | TTATCTATTTTTATA TACAT TTCT ATGTA TTTTATTTTCATCAA CD0217 281273 - 280761 - | putative nitroreductase purE 281723 - 282199 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purC 282205 - 282903 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purF 282915 - 284282 + | amidophosphoribosyltransferase purG 284276 - 285352 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 303 285571 - 285607 + G 71 -9 -2.80784 | gap 1, opp_overlap 285593 285597, overlap 285568 AAAATAGATTTAGTA GTTTT-GGCTGGTTATT TAAA AATAATCAGCCCAAAGC TGGTTAATGAGTTTA purN 285346 - 285939 + | phosphoribosylglycinamide formyltransferase TERM 304 286446 - 286436 - g 81 -2.6 -5.80248 | GAAGACAGAAAAAAA TTAT CAT ATAA AGCTTTCTCAACTAC purH 285932 - 287464 + | bifunctional purine biosynthesis protein purD 287475 - 288725 + | phosphoribosylamine--glycine ligase TERM 305 289432 - 289422 - g 72 -4 -5.11389 | opp_overlap 289422 ATAACAGAAATAAAA GTAT TAG ATAC TTATTGGTCTGATCA TERM 306 290027 - 290015 - g 72 -6.3 -4.33675 | AGTATATGATGAAAA CTTTG TTG CAAAG AGAATGGAAATAGGT TERM 307 290227 - 290217 - g 80 -6.8 -4.6902 | GCAGAAGTTCAAAAA GGAG ATG CTCC TAACGAAAGAAAAAT purL 288750 - 292556 + | formylglycinamidine ribonucleotide synthetase TERM 308 292612 - 292653 + F 90 -6.9 -5.76237 | gap 1 ATATTTAGATTTGAA GAGATGTAATAATGTGATGA TAA TCATT-TAATATTACATCTC TTTTTTATTTATATA CD0226 293002 - 293670 + | putative transglycosylase CD0227 293679 - 294107 + | hypothetical protein fliN 294131 - 294445 + | flagellar motor switch protein flgM 294596 - 294871 + | negative regulator of flagellin synthesis (anti-sigma-d factor) CD0230 294876 - 295292 + | putative flagellar biosynthesis protein TERM 309 295876 - 295866 - g 70 -5.4 -4.65168 | opp_overlap 295866 ATGACATGTTAAAAA GTCT TGA AGAC TTAAATAAATCTATT flgK 295310 - 296620 + | putative flagellar hook-associated protein flgL 296639 - 297571 + | flagellar hook-associated protein CD0233 297587 - 297979 + | hypothetical protein csrA 297973 - 298185 + | carbon storage regulator TERM 310 298330 - 298316 - g 75 -4.3 -5.186 | opp_overlap 298316 TAAAATATACAAAAA TAGCT AGAGG AGCTA TTATAGATAAAAATA fliS1 298207 - 298602 + | flagellar protein FliS fliS2 298599 - 298952 + | flagellar protein TERM 311 300365 - 300355 - g 72 -5.4 -4.70515 | TATATTCAAAACAAA TTGC AGA GCAA GAAAGAAATATAAGT fliD 298980 - 300503 + | flagellar cap protein CD0238 300506 - 300841 + | hypothetical protein fliC 300942 - 301814 + | flagellin subunit TERM 312 301846 - 301866 + F 88 -6.9 -5.55855 | opp_overlap 301846 301849 TGAATAAAAAAGAAA GGATAAGGC TTT GCTTTATTC TTTTCTTTTTTTAGA TERM 313 303223 - 303204 - g 100 -9.4 -4.79953 | ATAAGAATAAACAAA CATGTATC ATTA GATACATG TAGAAAAATACTAAA CD0240 301908 - 304049 + | putative glycosyltransferase CD0241 304766 - 305368 + | phosphoserine phosphatase TERM 314 305633 - 305656 + GF 74 -3.2 -5.40072 | opp_overlap 305620, overlap 305634 ATTCTAGAGACACTG TTATATCACT AGAT GGTGATATAC TTTTTTTCAAAGAAG CD0242 305341 - 305985 + | hypothetical protein CD0243 305998 - 306738 + | hypothetical protein CD0244 306767 - 308251 + | putative CDP-glycerol:Poly(glycerophosphate) glycerophosphotransferase TERM 315 308336 - 308357 + F 74 -5.2 -5.25805 | opp_overlap 308336 TATAAGATAATAAAG GGCAAATT AATTAA AGTTTGCC TTTTTTAAATTTATT TERM 316 308929 - 308909 - f 93 -11.2 -3.4404 | opp_overlap 308909 AAGAAAAGTCTATAA TGACTGCC TTTTT GGCAGTCA TTTTGTTATGGAAAA TERM 317 308909 - 308929 + F 100 -11.2 -4.77165 | opp_overlap 308909 AAGAAAAGTCTATAA TGACTGCC TTTTT GGCAGTCA TTTTGTTATGGAAAA TERM 318 309063 - 309015 - f 75 -4.1 -5.59962 | opp_overlap 309027 309053, overlap 309016 309018 309019 309027 TAAAATAAAGAAAAA TTATCTCAAAAAGTTACTATTTT ACA AAAAGAGCAACTTTTCGAAGAAA TATTTAAATACATAT TERM 319 309061 - 309018 - f 72 -7.8 -3.48897 | gap 1, opp_overlap 309027 309053, overlap 309015 309016 309019 309027 AATAAAGAAAAATTA TCT-CAAAAAGTTACTATTTT ACA AAAAGAGCAACTTTTCGAAGA AATATTTAAATACAT TERM 320 309059 - 309019 - f 75 -9.3 -2.66898 | opp_overlap 309027 309053, overlap 309018 309015 309016 309027 ATAAAGAAAAATTAT CTCAAAAAGTTACTATTTT ACA AAAAGAGCAACTTTTCGAA GAAATATTTAAATAC flgB 309272 - 309589 + | flagellar basal-body rod protein flgC 309597 - 310001 + | flagellar basal-body rod protein fliE 310011 - 310328 + | flagellar hook-basal body protein FliE fliF 310353 - 311903 + | flagellar MS-ring protein fliG 311916 - 312986 + | flagellar motor switch protein fliH 312979 - 313710 + | flagellar assembly protein TERM 321 314393 - 314368 - g 82 -6.2 -5.28481 | GAGGGAATGAAAAAA TCTGTTGTTG TGTGTG CAACATCAGA TAAAGCCCCTCTAGT fliI 313714 - 315033 + | flagellum-specific ATP synthase fliJ 315061 - 315510 + | flagellar protein fliK 315539 - 316744 + | putative flagellar hook-length control protein flgD 316762 - 317370 + | putative basal-body rod modification protein TERM 322 318167 - 318143 - g 75 -7.2 -4.15006 | ATATGCATTCCAAAA TCCAGCAG GCCTGGATG CTGCTGGA GGAAACTTGTTTAAA flgE 317397 - 318380 + | flagellar hook protein CD0255A 318393 - 318596 + | putative flagellar protein motA 318596 - 319414 + | chemotaxis protein motB 319404 - 320099 + | chemotaxis protein fliL 320111 - 320554 + | flagellar basal body-associated protein TERM 323 320872 - 320850 - g 72 -5.1 -4.80736 | CATTAAAGAAAGAAA TTTTAAAAT TCAAG ATTTTAAAA TGGAAAAAATTAAAA TERM 324 320901 - 320889 - g 77 -4.9 -5.25735 | GGAAAAAATTAAAAA GAAAT ACG ATTTC AGTAGATATATTGGA CD0259 320569 - 320943 + | putative flagellar protein TERM 325 320993 - 321003 + G 78 -4 -5.38958 | TACCATATACAAGTT CAAT GCA ATTG TTTTTATTTCTAACT fliP 320944 - 321609 + | flagellar biosynthesis protein FliP fliQ 321622 - 321891 + | flagellar export protein TERM 326 322439 - 322453 + G 81 -6.4 -5.08255 | ACCTATTGTACTTTG TCTGCT TAT GGCAGA TTTTATTTTAGGGCT TERM 327 323041 - 323019 - g 70 -5.7 -4.33165 | CCAAATTTATCAAAA TTAAATCCA ATTAG TGGATTCAA AAACATGTTTTCTAT TERM 328 323395 - 323383 - g 75 -4.1 -5.18409 | TAAAACAAAAACAAA GACAA ATT TCGTC TCAAAGGACAATGCA TERM 329 323597 - 323586 - g 70 -4.4 -4.89519 | opp_overlap 323586 ATAATAGAAAACAAA CCTA TTGC TAGG TTGTTATATAAGCAA flhB 321903 - 323717 + | bifunctional flagellar biosynthesis protein FliR/FlhB TERM 330 325494 - 325471 - gf 71 -7.6 -3.44229 | gap 1, opp_overlap 325477 325493, overlap 325476 AGTTGATGATGATAA GACAATTGTAG TGG CTACA-TTGTC TCCAGAAACTGAAGA TERM 331 325542 - 325525 - gf 71 -7.1 -3.70773 | GTTGATATCTAATAA TTTACAG AGGT CTGTAAA TGGAACTTATCCAGC flhA 323726 - 325801 + | flagellar biosynthesis protein FlhA flhF 325776 - 326792 + | flagellar biosynthesis regulator FlhF fleN 326789 - 327667 + | flagellar number regulator fliA 327681 - 328382 + | RNA polymerase sigma factor for flagellar operon CD0267 328398 - 328820 + | hypothetical protein TERM 332 329064 - 329050 - g 72 -8.6 -2.97902 | opp_overlap 329052, overlap 329052 TAAGAGGATTATATA TAGCAG TTT CTGCTA TGATAACTAATCAAC flgG 329031 - 329804 + | flagellar basal body rod protein FlgG flgG 329825 - 330586 + | flagellar basal body rod protein FlgG TERM 333 331279 - 331255 - g 72 -4.4 -5.10497 | opp_overlap 331255 AATTTACCCAAAAAA TCTATAATAG TGTAT CTAATATAGA ATTATCAGTTATTGC fliM 330609 - 331490 + | putative flagellar motor switch protein fliN 331493 - 331867 + | putative flagellar motor switch protein TERM 334 333048 - 333064 + G 78 -9.5 -3.24924 | overlap 333046 GGGAATACATCTGAA GCAACTT ATC AAGTTGC TATTCTCAGTGAAAA CD0272 331899 - 333302 + | hypothetical protein TERM 335 333344 - 333326 - f 78 -6.2 -5.09221 | opp_overlap 333326 333342, overlap 333342 GATAAGAAAAATAAA TTATTTTA TTT TAAAATAA TATGATTATAATATA TERM 336 333622 - 333608 - g 79 -7.2 -4.52047 | CATCAGATTATAAAA TTACAG TAT CTGTAA ATAAAGGAGAAGGTA TERM 337 333709 - 333725 + G 71 -5.9 -4.50627 | overlap 333711 ATAAATCAAGTTGCT TTTTCAG GTG CTGAAGA TTTCTTTAATAAATA htpG 333418 - 335355 + | heat shock protein 90 TERM 338 336734 - 336715 - g 71 -2.2 -5.40474 | ATTTCCTTAAAAAAA TAGATTTA GATA TAAAACTA AGTGATTTAGGTATT dhaT 335742 - 336872 + | putative 1,3-propanediol dehydrogenase TERM 339 337319 - 337304 - g 70 -4 -4.91109 | TTGGGATTAGAAAAA GTCTGA AGTT TCAAAC ATGTAAACCTTCTGC spl 337099 - 338121 + | spore photoproduct lyase TERM 340 338154 - 338110 - f 100 -10.4 -4.6759 | opp_overlap 338112 338117, overlap 338112 AATAGTTTAATAAAA TATATAATATAGCAAATCTT ACCTA AAGATTTGCTATATTTTATT TTTATATATTTTATG TERM 341 338152 - 338112 - f 100 -13 -3.94438 | opp_overlap 338112 338117, overlap 338110 TAGTTTAATAAAATA TATAATATAGCAAATCTT ACCTA AAGATTTGCTATATTTTA TTTTTATATATTTTA TERM 342 338112 - 338152 + F 100 -13 -5.186 | opp_overlap 338112 338110, overlap 338117 TAGTTTAATAAAATA TATAATATAGCAAATCTT ACCTA AAGATTTGCTATATTTTA TTTTTATATATTTTA TERM 343 338117 - 338147 + F 100 -12.9 -5.38839 | opp_overlap 338112 338110, overlap 338112 TAATAAAATATATAA TATAGCAAATCTT ACCTA AAGATTTGCTATA TTTTATTTTTATATA CD0276 338303 - 339214 + | AraC family transcription regulator CD0277 339229 - 339645 + | hypothetical protein TERM 344 339679 - 339655 - T 70 -7.2 -3.68962 | opp_overlap 339655 GCTTAACATATAGAA CAGGATGAAT ATATA AGTCATCCTG TTTTTATATTCAATC TERM 345 339655 - 339679 + T 87 -7.2 -5.10767 | opp_overlap 339655 GCTTAACATATAGAA CAGGATGAAT ATATA AGTCATCCTG TTTTTATATTCAATC CD0278 340137 - 339745 - | putative transcriptional regulator CD0279 340278 - 340673 + | hypothetical protein TERM 346 341004 - 340957 - f 100 -8.8 -5.32882 | opp_overlap 340955 340958, overlap 340958 TATGACTATAAAAAA TTGCTACTTATTATTTGGATAT TTTT ATATATAAATAATAAGTAGCAT GACTTTATACATTAA TERM 347 340958 - 341003 + F 100 -14.5 -2.7204 | opp_overlap 340957 340958, overlap 340955 ATGACTATAAAAAAT TGCTACTTATTATTTGGATAT TTTT ATATATAAATAATAAGTAGCA TGACTTTATACATTA TERM 348 341003 - 340958 - f 95 -12.3 -3.78644 | opp_overlap 340958 340955, overlap 340957 ATGACTATAAAAAAT TGCTACTTATTATTTGGATAT TTTT ATATATAAATAATAAGTAGCA TGACTTTATACATTA TERM 349 341253 - 341239 - g 82 -7.2 -4.81685 | ATCAAGTAGGAAAAA TCTCTT TAA AAGAGA AGACTGTTATTTTCG CD0279A 341076 - 341282 + | hypothetical protein TERM 350 341372 - 341343 - T 86 -3.6 -6.02919 | gap 1, opp_overlap 341343 CTACAAATAAAAAAA GGC-GTAGCACTA TTTTT TAGTGTCACAGCC CCTTTTTTGTTTATA CD0281 342170 - 341439 - | hypothetical protein TERM 351 342644 - 342657 + r 73 -5.3 -4.73677 | opp_overlap 342644 ATTATCTGAAAAAAT GGTAT TTTT ATACC TTTGTTTGTTATGCA TERM 352 342784 - 342743 - R 83 -7.5 -4.63748 | gap 1, opp_overlap 342743 AAATAAGTAAAGAAA GAGCTATCATA-GAACAAAT TTA ATTTGCTCATGCGACAGCTC CTTTTTAGATGATGC CD0282 343751 - 343008 - | putative hydrolase TERM 353 344485 - 344510 + G 76 -7.7 -3.9461 | opp_overlap 344483, overlap 344486 TTATCATATTTAACT GTGCTGATTAT TCTG ATAATCAGCAA TTATTATTAGCGCAG TERM 354 344486 - 344509 + G 87 -11.2 -2.96444 | opp_overlap 344483, overlap 344485 TATCATATTTAACTG TGCTGATTAT TCTG ATAATCAGCA ATTATTATTAGCGCA CD0283 343917 - 346484 + | putative transcription antiterminator TERM 355 346498 - 346515 + F 86 -4.1 -6.11019 | opp_overlap 346500, overlap 346500 GATACAAAATTTAAA AATAGCC AAAA GGCTATC TTTTTTTTACTTTTT TERM 356 346513 - 346500 - f 78 -6.7 -4.89729 | opp_overlap 346500 346498 TACAAAATTTAAAAA TAGCC AAAA GGCTA TCTTTTTTTTACTTT TERM 357 346500 - 346513 + F 77 -6.7 -4.63519 | opp_overlap 346500, overlap 346498 TACAAAATTTAAAAA TAGCC AAAA GGCTA TCTTTTTTTTACTTT CD0284 346714 - 347118 + | PTS system, IIA component CD0285 347142 - 347639 + | PTS system, IIB component CD0286 347642 - 348043 + | putative PTS system, IIA component CD0287 348061 - 348549 + | PTS system, IIB component CD0288 348576 - 349331 + | PTS system, IIC component TERM 358 349375 - 349363 - g 85 -7.7 -4.8384 | TAAAGAAGTTAAAAA TGGAC AAG GTCCA ACTGAAGTTAATAAG CD0289 349331 - 350194 + | PTS system, IID component CD0290 350241 - 350720 + | hypothetical protein TERM 359 350756 - 350736 - f 86 -9.7 -4.19238 | opp_overlap 350736 TTTTTAATGCTAAAA GCCTGTTCT TTA AGGACAGGC TTTAAAAAGATAGAA TERM 360 350736 - 350756 + F 95 -11.9 -3.54424 | opp_overlap 350736 TTTTTAATGCTAAAA GCCTGTTCT TTA AGGACAGGC TTTAAAAAGATAGAA CD0291 350785 - 352092 + | putative peptidase TERM 361 352585 - 352609 + F 100 -9.4 -5.19275 | opp_overlap 352585 AAGATATATGTACAA GCAGTTAATC TAAAT GATTGACTGC TTTTCTTTTATAGAT CD0292 353054 - 354148 + | DNA-binding protein CD0293 354350 - 355270 + | ABC transporter, ATP-binding protein CD0294 355267 - 356025 + | putative ABC transporter, permease protein TERM 362 356090 - 356112 + F 73 -4.2 -5.1971 | opp_overlap 356090 CCTAAAAATCAAAAA GACTTGGA CTTAAGT TTCAAGTC TTTTTGATTTTTAAT TERM 363 356175 - 356150 - f 77 -7.1 -4.43189 | overlap 356162 356164 ATTAAGTGTAGAAAA TAATACAAATA ATAT TATTTGTATCA AATAAATATAAGAAT CD0295 356273 - 357346 + | putative iron-sulfur-binding protein CD0296 357416 - 357679 + | hypothetical protein TERM 364 357709 - 357764 + F 79 -4 -5.76633 | gap 3, opp_overlap 357729 TATTCTAATAAAAAA TACTGCTTTAATAATAATA-T-GTATA ATCTA TATACTAATATTATT-TTGAAGCAGTA TTTTTTTGTGTATAG CD0297 357885 - 358862 + | putative biotin synthase TERM 365 358917 - 358882 - f 83 -9.4 -3.51708 | opp_overlap 358882, overlap 358878 TACTGCTTAAATTAA TTAATATACTTTTAGA TAAT TATAAAAGTATATTAA TTTTTTTTTGCAGAT TERM 366 358882 - 358917 + F 100 -9.4 -6.07627 | opp_overlap 358882 358878 TACTGCTTAAATTAA TTAATATACTTTTAGA TAAT TATAAAAGTATATTAA TTTTTTTTTGCAGAT rbsR 359082 - 360104 + | putative ribose operon repressor rbsK 360146 - 361036 + | putative ribokinase rbsB 361084 - 362046 + | D-ribose ABC transporter, substrate-binding protein TERM 367 363325 - 363315 - g 79 -5.4 -5.24551 | GGAAACCAACAAAAA GCTA TAA TAGC AAGATGGCTTTTATT rbsA 362100 - 363611 + | ribose ABC transporter, ATP-binding protein TERM 368 363795 - 363783 - g 74 -6.3 -4.37337 | overlap 363788 ACAAATATCAATAAA TGCAA TAC TTGCA GTAGGTATGACATTT rbsC 363595 - 364593 + | ribose ABC transporter, permease protein TERM 369 365715 - 365703 - g 72 -6.3 -4.23647 | AAATGATGTAACAAA TGTCA TAA TGACA AGGGCTAATGGAGAT argE 364777 - 366039 + | putative acetylornithine deacetylase CD0304 366059 - 366802 + | hypothetical protein abgB1 366975 - 368360 + | putative aminobenzoyl-glutamate utilization protein CD0306 368579 - 369418 + | hypothetical protein CD0307 369408 - 369851 + | putative 'four-disulfide core' protein CD0308 369853 - 370353 + | hypothetical protein TERM 370 370465 - 370503 + T 100 -18.6 -3.14294 | opp_overlap 370467 370469 370474, overlap 370474 ATATTCTTAGTGCAA CATATAAAAGCTTTGATT TTT AGTCAAAGCTTTTATATG TTAGATATAAATATT TERM 371 370501 - 370467 - T 95 -13.2 -3.05963 | opp_overlap 370465 370474, overlap 370469 370474 ATTCTTAGTGCAACA TATAAAAGCTTTGATT TTT AGTCAAAGCTTTTATA TGTTAGATATAAATA TERM 372 370499 - 370469 - T 87 -11.4 -3.08813 | opp_overlap 370465 370474, overlap 370467 370474 TCTTAGTGCAACATA TAAAAGCTTTGATT TTT AGTCAAAGCTTTTA TATGTTAGATATAAA TERM 373 370474 - 370494 + T 89 -9.1 -4.68545 | opp_overlap 370474 370469 370467, overlap 370465 GTGCAACATATAAAA GCTTTGATT TTT AGTCAAAGC TTTTATATGTTAGAT TERM 374 370494 - 370474 - T 77 -6.9 -4.67943 | opp_overlap 370465 370474, overlap 370469 370467 GTGCAACATATAAAA GCTTTGATT TTT AGTCAAAGC TTTTATATGTTAGAT CD0309 371283 - 370555 - | putative phosphoserine phosphatase CD0310 371408 - 372496 + | hypothetical protein TERM 375 372559 - 372501 - T 77 -7.2 -4.44667 | gap 1, opp_overlap 372512 372544, overlap 372512 372517 TTTTGGAATAATAAA TTTAGACAT-TATTTAAGCGAGATTAA CTGAAT TTAATCTCGCTTAAATTTATTTCTATA ATATTGGGGGAATAT TERM 376 372512 - 372547 + T 100 -15.1 -4.64048 | opp_overlap 372512 372501 372517, overlap 372544 TAAATTTAGACATTA TTTAAGCGAGATTAA CTGAAT TTAATCTCGCTTAAA TTTATTTCTATAATA TERM 377 372547 - 372512 - T 100 -15.1 -2.72036 | opp_overlap 372512 372544, overlap 372501 372517 TAAATTTAGACATTA TTTAAGCGAGATTAA CTGAAT TTAATCTCGCTTAAA TTTATTTCTATAATA TERM 378 372542 - 372517 - T 87 -10.6 -3.12606 | opp_overlap 372512, overlap 372512 372501 TTAGACATTATTTAA GCGAGATTAA CTGAAT TTAATCTCGC TTAAATTTATTTCTA TERM 379 372763 - 372737 - T 100 -14 -4.98531 | opp_overlap 372737 TTTTTAAATGAAAAA GTCAGATAAAAT TAA ATTTTATCTGAC TTTTTCTATGTTTAT TERM 380 372737 - 372763 + T 100 -14 -5.1634 | opp_overlap 372737 TTTTTAAATGAAAAA GTCAGATAAAAT TAA ATTTTATCTGAC TTTTTCTATGTTTAT TERM 381 372802 - 372831 + T 77 -8 -4.07868 | ATTATGTTAATATCT GTTGACCGAATA AGCGCA TATTCAGTCAAC TTTCTATACCTATAA CD0311 373781 - 372933 - | hypothetical protein TERM 382 373827 - 373816 - H 70 -3 -5.4588 | opp_overlap 373816 GAAAACTATAAAAAA GTTT ACAA AAAC TTATTCTAATAATAT CD0312 373980 - 374345 + | transcription regulator ArsR CD0313 374368 - 376755 + | putative heavy-metal-transporting ATPase TERM 383 376823 - 376857 + F 78 -6 -5.06414 | gap 1, opp_overlap 376823 TATGTAATAATGAAA GGTATCAATAA-GTT TCTTTT AACTTTATTGGTACC TTTTTATTGGAGCGC TERM 384 377072 - 377056 - f 72 -8.1 -3.15078 | overlap 377054 TATATTGTATTAATA GTTGTAA TTT TTACAAC AAAATGTGTGTGTTA TERM 385 377493 - 377478 - f 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 386 378136 - 378148 + F 85 -10.5 -3.05463 | TGAGTACTAGGTGTC GGGGG TTA CCCCC TTCGGTGCCGCAGCT TERM 387 378863 - 378907 + F 75 -8.2 -3.53091 | gap 1, opp_overlap 378894, overlap 378862 GGAGAATTACCTACT GT-TTAATTTTGAGGGTTCGT TTTT ACGAATACTCAAAATTAGCAC TTTAAGCAACGGGAT TERM 388 379360 - 379339 - f 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGCGGACATATC TERM 389 379524 - 379509 - f 81 -10.4 -2.71011 | overlap 379496 ACCCTGTGGGAAGCA GGAGGG ACCA CCCTCC AAGGCTAAATACTAC TERM 390 379597 - 379586 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 391 382080 - 382063 - f 73 -5.7 -4.78764 | TAAACTTATTAAAAA CTTAATA GAAA TATTAAG CATAAAGATTATGTG CD0314 382386 - 382994 + | hypothetical protein TERM 392 383121 - 383146 + G 74 -7.7 -3.72407 | overlap 383119 TATTGCTTGTGTCTG TGGTACTTTTT TCTT AAAATGTACCA TGTTTTACACTTTGT TERM 393 383222 - 383192 - g 88 -7.6 -4.87592 | opp_overlap 383193, overlap 383193 TTATATAGAAGAAAA GGCGGCAGCTTTGA AAA TCAAAACTACCACT TTATAAATATTCAAA TERM 394 383221 - 383193 - g 87 -11.1 -3.5147 | opp_overlap 383193, overlap 383192 TATATAGAAGAAAAG GCGGCAGCTTTGA AAA TCAAAACTACCAC TTTATAAATATTCAA CD0315 383016 - 383228 + | hypothetical protein CD0316 384308 - 383535 - | putative ABC transporter, permease protein CD0317 385056 - 384319 - | putative ABC transporter, permease protein CD0318 385972 - 385049 - | ABC transporter, ATP-binding protein CD0319 387052 - 386129 - | two-component sensor histidine kinase CD0320 387755 - 387054 - | two-component response regulator CD0321 387936 - 387748 - | hypothetical protein CD0322 388188 - 389093 + | hypothetical protein CD0323 389107 - 390879 + | hypothetical protein TERM 395 391290 - 391309 + F 100 -7.9 -5.92399 | opp_overlap 391284 391290 TGTGGAAAATTAGAA GCCTAAC CATCGA GTTAGGC TTTTTTATTTTATTA TERM 396 391309 - 391290 - f 76 -8.6 -3.68359 | opp_overlap 391290, overlap 391284 TGTGGAAAATTAGAA GCCTAACC ATCG AGTTAGGC TTTTTTATTTTATTA cbiM 391385 - 392137 + | putative cobalt transport protein cbiN 392127 - 392411 + | cobalt transport protein cbiQ 392414 - 393112 + | cobalt transport protein TERM 397 393607 - 393630 + G 73 -8.2 -3.40299 | overlap 393627 AACCTACAGCTGGTT TAGACCCAGT AAGT ACTAGGTCTA TTGTAGATATAATAA cbiO 393102 - 393923 + | cobalt ABC transporter, ATP-binding protein TERM 398 393993 - 394022 + F 86 -3.8 -6.09888 | gap 1, opp_overlap 393980, overlap 393980 393995 TAGACCCCTTAAAGG TG-CCTTATGATT CCCCA AATCATAAGGTTA TTTTTTTTATTAAAC TERM 399 393995 - 394019 + F 100 -10.2 -5.08831 | opp_overlap 393980, overlap 393980 393993 GACCCCTTAAAGGTG CCTTATGATT CCCCA AATCATAAGG TTATTTTTTTTATTA pcrA 394178 - 396442 + | ATP-dependent DNA helicase CD0329 396459 - 397757 + | putative aminopeptidase 2 CD0330 397788 - 398540 + | hypothetical protein TERM 400 398637 - 398619 - g 89 -6.8 -5.48213 | overlap 398621 TATGGAAAATAAAAA TCCTATAG TAA CTATAGAA ATGGAAAATGGAAAA ppiB 398605 - 399129 + | peptidyl-prolyl cis-trans isomerase TERM 401 399201 - 399238 + F 70 -3.8 -5.13137 | gap 2, opp_overlap 399201 AAAAATGAGGATAAA GTGAAATGTTATTATGTT TTTA GACA-AATA-CATTTCAC TTTTTAATTTATTTG TERM 402 399686 - 399653 - f 100 -10.5 -5.01845 | opp_overlap 399653 TATAATAATGAAAAA GAACATGCTATTAGA AATT TCTAATGACATGTTC TTTTTTTGTAGAAAT TERM 403 399653 - 399686 + F 100 -10.5 -5.61596 | opp_overlap 399653 TATAATAATGAAAAA GAACATGCTATTAGA AATT TCTAATGACATGTTC TTTTTTTGTAGAAAT TERM 404 401425 - 401412 - g 70 -8.1 -3.18849 | overlap 401410 401421 GCGACAGGAGTAACA GGACC AACA GGTCC AACAGGAGCAACAGG bclA1 399807 - 401888 + | putative exosporium glycoprotein TERM 405 402078 - 402113 + T 95 -13.6 -2.9632 | opp_overlap 402083, overlap 402083 TATATATATATAATA AAAAACTGTCTCAAAT ATAG ATTTGAGACAGTTTTC GTTATTTAAAAATTT TERM 406 402083 - 402108 + T 100 -13.5 -4.62203 | opp_overlap 402083, overlap 402078 ATATATAATAAAAAA CTGTCTCAAAT ATAG ATTTGAGACAG TTTTCGTTATTTAAA TERM 407 402108 - 402083 - T 100 -13.5 -5.62045 | opp_overlap 402083 402078 ATATATAATAAAAAA CTGTCTCAAAT ATAG ATTTGAGACAG TTTTCGTTATTTAAA ppaC 403731 - 402133 - | putative manganese-dependent inorganic pyrophosphatase TERM 408 402161 - 402177 + g 83 -2.3 -5.84381 | opp_overlap 402164, overlap 402164 TTGATTGCAGTAGTT AAATTAG GGA CTAATTG TTTTTTTCTTGATAC TERM 409 402164 - 402174 + g 70 -4 -4.96435 | opp_overlap 402164, overlap 402161 ATTGCAGTAGTTAAA TTAG GGA CTAA TTGTTTTTTTCTTGA TERM 410 404649 - 404639 - g 70 -4 -4.92783 | AAGGTAGTAGAAAAA TCAA ATG TTGA AGTATGTAGTCCTGA adhE 404609 - 407251 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 411 407612 - 407585 - T 82 -5.4 -5.54907 | opp_overlap 407585 407589 407590 407596 407599, overlap 407588 407589 407590 TTTAGAAAAGAAAAA GAATTGGGGCCT ATTA AGGCCCCCTTAC TATTTTTTGATAGAT TERM 412 407609 - 407588 - T 73 -5.7 -4.82111 | opp_overlap 407585 407589 407590 407596 407599, overlap 407585 407589 407590 AGAAAAGAAAAAGAA TTGGGGCCT ATTA AGGCCCCCT TACTATTTTTTGATA TERM 413 407608 - 407589 - T 82 -9.2 -3.45606 | opp_overlap 407585 407589 407590 407596 407599, overlap 407588 407585 407590 GAAAAGAAAAAGAAT TGGGGCCT ATTA AGGCCCCC TTACTATTTTTTGAT TERM 414 407589 - 407608 + T 84 -9.2 -3.67898 | opp_overlap 407589 407588 407585 407590, overlap 407585 407590 407596 407599 GAAAAGAAAAAGAAT TGGGGCCT ATTA AGGCCCCC TTACTATTTTTTGAT TERM 415 407607 - 407590 - T 90 -12.7 -2.64923 | opp_overlap 407589 407585 407590 407596 407599, overlap 407589 407588 407585 AAAAGAAAAAGAATT GGGGCCT ATTA AGGCCCC CTTACTATTTTTTGA TERM 416 407590 - 407607 + T 91 -12.7 -2.79112 | opp_overlap 407590 407589 407588 407585, overlap 407589 407585 407596 407599 AAAAGAAAAAGAATT GGGGCCT ATTA AGGCCCC CTTACTATTTTTTGA TERM 417 407596 - 407614 + T 73 -4.6 -5.19261 | opp_overlap 407590 407589 407588 407585, overlap 407590 407589 407585 407599 AAAAGAATTGGGGCC TATTAAGG CCC CCTTACTA TTTTTTGATAGATTT CD0335 407953 - 407612 - | hypothetical protein CD0336 408656 - 407988 - | ABC transporter, ATP-binding protein CD0337 411244 - 408668 - | ABC transporter, permease protein TERM 418 410753 - 410777 + g 75 -4.3 -5.32396 | opp_overlap 410752 TCTATCTTCAAGGAT TCCAACAACTT TAA AAGTTTCTGGA TTTTCTTTTTGATAT CD0338 411452 - 412387 + | two-component sensor histidine kinase CD0339 412406 - 413143 + | two-component response regulator TERM 419 413306 - 413267 - T 88 -12.5 -2.69178 | opp_overlap 413267 413271, overlap 413257 413269 413271 AATTACAGTATATTA TATATTGGACTTTCTAA TTTTTT TAAGAAAGTCCAATATA TTTTAGGGGTAGTTT TERM 420 413267 - 413306 + T 100 -12.5 -4.13304 | opp_overlap 413257 413267 413269 413271, overlap 413271 AATTACAGTATATTA TATATTGGACTTTCTAA TTTTTT TAAGAAAGTCCAATATA TTTTAGGGGTAGTTT TERM 421 413304 - 413269 - T 82 -10.7 -2.8844 | opp_overlap 413267 413271, overlap 413257 413267 413271 TTACAGTATATTATA TATTGGACTTTCTAA TTTTTT TAAGAAAGTCCAATA TATTTTAGGGGTAGT TERM 422 413302 - 413271 - T 74 -8.9 -2.98986 | opp_overlap 413267 413271, overlap 413257 413269 413267 ACAGTATATTATATA TTGGACTTTCTAA TTTTTT TAAGAAAGTCCAA TATATTTTAGGGGTA CD0340 418385 - 413328 - | hypothetical protein CD0341 418844 - 418410 - | hypothetical protein CD0342 419314 - 419063 - | hypothetical protein CD0343 419403 - 420134 + | hypothetical protein TERM 423 420903 - 420889 - g 71 -2.2 -5.41746 | AATGCTTTAAAAAAA TATTTA TAT CAAATA AGAGAGTTGCTTGTA CD0344 420193 - 421104 + | metallo-beta-lactamase superfamily protein CD0345 421155 - 421967 + | putative guanosine 3',5'-bis-pyrophosphate (ppGpp) synthesis/degradation protein TERM 424 422002 - 422043 + F 83 -9.5 -3.52849 | opp_overlap 422000, overlap 422000 GCTAAATATTAATGG GGCTGCCTCTTAATGGAAA ATAA TTTCTAAAAAGAGACAGCC TATTTAGTGTAATTA CD0346 422075 - 422767 + | putative phosphoesterase CD0347 422833 - 423795 + | hypothetical protein TERM 425 425009 - 425042 + F 70 -7.5 -3.34239 | opp_overlap 425000 425010 425016, overlap 425008 425010 425016 AAAAATGTAAAATTT ACGAAAAGCTTGCTT AAAT ATGCAAGCTTTTTGG TATTATATAGGTATA TERM 426 425041 - 425010 - f 73 -8.8 -2.79535 | opp_overlap 425009 425008 425010 425016, overlap 425016 AAAATGTAAAATTTA CGAAAAGCTTGCTT AAAT ATGCAAGCTTTTTG GTATTATATAGGTAT TERM 427 425010 - 425041 + F 83 -11 -2.60061 | opp_overlap 425010 425016, overlap 425009 425008 425016 AAAATGTAAAATTTA CGAAAAGCTTGCTT AAAT ATGCAAGCTTTTTG GTATTATATAGGTAT TERM 428 425035 - 425016 - f 73 -6.4 -4.34771 | opp_overlap 425010 425009 425008 425016, overlap 425010 TAAAATTTACGAAAA GCTTGCTT AAAT ATGCAAGC TTTTTGGTATTATAT TERM 429 425016 - 425035 + F 80 -6.4 -4.9181 | opp_overlap 425016 425010, overlap 425010 425009 425008 TAAAATTTACGAAAA GCTTGCTT AAAT ATGCAAGC TTTTTGGTATTATAT TERM 430 425641 - 425629 - g 74 -6.3 -4.40132 | ACTAACTATAATAAA GATGT TAA ACATC AAAATATAGTTAGAG CD0350 425143 - 425703 + | hypothetical protein CD0351 425731 - 426222 + | hypothetical protein TERM 431 426247 - 426277 + F 93 -7.1 -5.80003 | gap 1, opp_overlap 426247 426246 426241 TTATTATAATAAAAG CTAGTAACCTTGTA AAAA TATA-GGTTACTAG TTTTTTATTTATTCA CD0352 426451 - 427002 + | putative transcriptional regulator CD0353 427088 - 428020 + | hypothetical protein CD0354A 428111 - 428677 + | hypothetical protein int-Tn 430041 - 428851 - | integrase TERM 432 430112 - 430069 - R 87 -11.3 -3.05384 | gap 1 CTTTCCGTCATGGAA TGAGCCGT-GATACGCTATA TTTAT TATACCATATCTACGGCTCA ATGACATTAGATTTC xis 430322 - 430119 - | excisionase CD0356A 430504 - 430397 - | hypothetical protein TERM 433 430437 - 430425 - G 78 -9.1 -3.28712 | TTCTTGTGGGCAGAA CCGCA CCA TGCGG ACGTATCATTATTCT CD0358 430949 - 430695 - | hypothetical protein CD0359 431381 - 430953 - | hypothetical protein TERM 434 431531 - 431502 - R 82 -4.3 -5.67063 | TCGAGTATAAAAAAA GCCCGCACAAA ACGTATAG TCTGTACGAGC TTTTAAAGCTGAAGC CD0360 432041 - 431667 - | putative transcriptional regulator CD0361 433100 - 432090 - | two-component system, sensor histidine kinase TERM 435 433029 - 433017 - G 77 -4.8 -5.28166 | GAAAATCAAGAAAAA TGCC ACTAA GGCA AGAAAGAAAAGCTGA CD0362 433771 - 433088 - | two-component system, response regulator TERM 436 433410 - 433437 + g 74 -9.2 -2.80307 | opp_overlap 433400 433410, overlap 433400 GATAACTGCAATGCA CGCTTGATCTTC TCAA GAAGAATAAGCG TGTCATACGGCTTTG TERM 437 433815 - 433790 - R 90 -12.7 -2.64091 | opp_overlap 433788 433782 433780 433790, overlap 433780 AATTATTTCACAGTA GGAGAGCTAGA AAAA TCTAACTCTCC TCATTGATATTTCGT TERM 438 433790 - 433815 + r 82 -10.5 -2.87822 | opp_overlap 433790 433780, overlap 433788 433782 433780 AATTATTTCACAGTA GGAGAGCTAGA AAAA TCTAACTCTCC TCATTGATATTTCGT CD0363 435782 - 433806 - | putative lantibiotic ABC transporter, membrane protein TERM 439 434969 - 434979 + g 70 -4 -4.93968 | overlap 434960 ACAAGTTATCATTAT GATA CTT TATC TTTTTACTTCTAAGT CD0364 436542 - 435772 - | putative lantibiotic ABC transporter,ATP-binding protein TERM 440 435829 - 435845 + g 76 -3.7 -5.34555 | opp_overlap 435815 435832, overlap 435832 ATCCAATATTTCATT GAAGAAA TCT TTTCTGC TTTTTTCTCCTCTGA CD0365 437446 - 436715 - | putative lantibiotic ABC transporter, permease protein CD0366 438365 - 437439 - | putative lantibiotic ABC transporter,ATP-binding protein TERM 441 438199 - 438173 - G 81 -8.2 -4.07687 | ACTGCTTTCCGAAAA TTTCTACTTCTC CAG AAGAAATAGAAA TAAGTCCAAGAACCA CD0367 439343 - 438435 - | two-component system, sensor histidine kinase CD0368 440038 - 439346 - | two-component system, response regulator TERM 442 439388 - 439408 + g 72 -4.1 -5.05712 | TATTCCGTGAATGGT TTGAATATA ATC TATATCCAA TTTTTCATTCTTTAT CD0369 440314 - 440069 - | hypothetical protein CD0370 440511 - 440311 - | putative transcriptional regulator TERM 443 440564 - 440526 - R 100 -11.2 -4.14739 | opp_overlap 440518 TTATTCACCTCAAAA TGCGGTATATTTCCAACA TTA CGATAAAAATATACCGCA CAAGAGAAAATAAGT CD0371 441510 - 440599 - | conjugative transposon protein CD0372 442533 - 441526 - | putative cell wall hydrolase TERM 444 442204 - 442176 - G 95 -10.3 -4.15044 | opp_overlap 442176 442203 TTTTGCTGGAAGAAA GCAGGGACGCAAA ATA CTTACACCCCTGC TTGATTGAGCTTTCC CD0373 444740 - 442530 - | conjugative transposon protein TERM 445 443114 - 443124 + g 70 -4 -4.86731 | CGGTCTGTGTCGGCA TATC CTT GATA TTTTCTTTGACAGCG CD0374 447187 - 444737 - | conjugative transposon protein TERM 446 446782 - 446794 + g 71 -3.3 -5.31545 | overlap 446747 446747 GAAATTCCTTGAATG TCAGC CAC GCCGA TTTTTTGATGTTCTT TERM 447 446869 - 446858 - G 81 -3.6 -5.52096 | AAAGCCAAGAAAAAA GCGG TAGT CCAC TTGATTATCCCCAAT TERM 448 447142 - 447158 + g 71 -7.3 -3.8397 | CGAACACCTCATTGT CCTTGTT CCA GACAAGG TTATTGTCAATATAT CD0375 447563 - 447165 - | conjugative transposon protein TERM 449 447624 - 447602 - R 83 -7 -4.98531 | overlap 447595 TTTCTAAATGAAAAA GGACAGCC ATTTTCA GACTGTCC TTAAAATAAAATCGC CD0376 448180 - 447677 - | conjugative tranposon protein CD0377 448701 - 448198 - | conjugative tansposon protein TERM 450 448953 - 448978 + r 79 -8.3 -4.10429 | opp_overlap 448947 448953 TTGAGTATAGAAAAA GCAGTCGATCT TTTC AGAATGACTGC TTTTACACACTACTT TERM 451 448978 - 448953 - R 78 -6.1 -5.00895 | opp_overlap 448953, overlap 448947 TTGAGTATAGAAAAA GCAGTCGATCT TTTC AGAATGACTGC TTTTACACACTACTT CD0379 449213 - 448992 - | conjugative transposon protein TERM 452 449112 - 449096 - G 72 -8.1 -3.30203 | overlap 449092 CTACCAAGAAGCCAA TGAGTTT GGA AAACTCA CGCTTGAACCCTAAG CD0380 449357 - 449214 - | conjugative transposon protein CD0381 450472 - 449360 - | putative conjugative transposon replication initiation factor TERM 453 449507 - 449517 + g 71 -6.8 -3.91072 | overlap 449501 449502 CATTTTTAAGGTAGG GGCA ACC TGCC TTTGTAGCCATTTCA TERM 454 450496 - 450511 + r 76 -4.6 -5.27335 | overlap 450488 GCCTTGTCTGCGATA CGCCGT AATC ACAGCG TTTTTCTTTCAAGGC TERM 455 450768 - 450745 - R 81 -10.3 -2.63596 | opp_overlap 450745 450744, overlap 450708 450749 GCTGACGCCACACCA GCAACGGCT AGTCCG AGCCGTCGC CTTTCGCTTCGCACG CD0382 451224 - 450811 - | hypothetical protein CD0383 452591 - 451221 - | conjugative transposon FtsK/SpoIIIE-related protein TERM 456 452381 - 452356 - G 76 -6.1 -4.67943 | CGGTAATACAGAAAA GCGACCAATGC ACAA ACACCAGTCGC TATCAGTATCGTTAT CD0384 452997 - 452608 - | conjugative transposon protein CD0385 453332 - 453006 - | conjugative transposon protein TERM 457 453082 - 453097 + g 71 -7.6 -3.47526 | CGTCCTTTGACATTT TTACCG TCAG CGGTAA TCTTTGGATTGATAA CD0385A 453553 - 453368 - | hypothetical protein CD0386 456610 - 453566 - | putative collagen-binding surface protein TERM 458 454812 - 454853 + g 74 -8.1 -3.60525 | gap 1, opp_overlap 454843, overlap 454814 454846 ACATGACTTTCGCCC GTAGTCTTGCTTGTGATCCT AAA AGGAACATCAGCAAGAC-GC TTGTGTGTGCCTGCA TERM 459 454814 - 454852 + g 76 -9.6 -2.75993 | opp_overlap 454843, overlap 454812 454846 ATGACTTTCGCCCGT AGTCTTGCTTGTGATCCT AAA AGGAACATCAGCAAGACG CTTGTGTGTGCCTGC TERM 460 456700 - 456679 - H 73 -5.8 -4.89567 | opp_overlap 456678 GCTGAAAATAGAAAA GGAACGTC ATTTTA GGCGTTCC ATAGTCTATAAGTTA bglF 457410 - 459272 + | PTS system, beta-glucoside-specific IIABC component bglA 459275 - 460741 + | 6-phospho-beta-glucosidase bglG 460765 - 461601 + | beta-glucoside bgl operon transcription antiterminator TERM 461 461783 - 461824 + F 100 -9.9 -5.68438 | opp_overlap 461783 ATTAAAATATGCAAA TAGTTAAAATAAGTTTATG TGGT TATGAATTTATTTTAACTA TTTTTTGTTTAATGG CD0391 462184 - 463767 + | asparagine synthetase (glutamine-hydrolyzing) TERM 462 463773 - 463814 + T 74 -6 -4.57209 | opp_overlap 463779 463782, overlap 463779 463782 AAAATGTTAATACAA GAGGAAGAATCACCTGAA AGACCA TTCAGGTGATTCTTAATG TTTTATAATTAATGT TERM 463 463808 - 463779 - T 100 -13.8 -3.46629 | opp_overlap 463779 463773 463782, overlap 463782 TTAATACAAGAGGAA GAATCACCTGAA AGACCA TTCAGGTGATTC TTAATGTTTTATAAT TERM 464 463779 - 463808 + T 100 -13.8 -3.58428 | opp_overlap 463779 463782, overlap 463773 463782 TTAATACAAGAGGAA GAATCACCTGAA AGACCA TTCAGGTGATTC TTAATGTTTTATAAT TERM 465 463782 - 463805 + T 86 -9.7 -3.90315 | opp_overlap 463782 463779, overlap 463779 463773 ATACAAGAGGAAGAA TCACCTGAA AGACCA TTCAGGTGA TTCTTAATGTTTTAT TERM 466 463805 - 463782 - T 86 -9.7 -3.84873 | opp_overlap 463779 463773 463782, overlap 463779 ATACAAGAGGAAGAA TCACCTGAA AGACCA TTCAGGTGA TTCTTAATGTTTTAT CD0392 464442 - 463846 - | radical SAM-superfamily protein CD0393 464996 - 464469 - | hypothetical protein TERM 467 465027 - 465039 + r 70 -4.9 -4.79955 | opp_overlap 465027, overlap 465024 AAAATCCAGAGCTAA CATAA TTG TTATG TTTTCTTATAAATAT TERM 468 465294 - 465245 - R 100 -13.9 -5.47159 | opp_overlap 465248 465253, overlap 465248 GTTTAATATAAAAAA TAATATAAGAGAGTCTACTCAAT ATAT ACTGAGCTGACTCTCTTATATTT GGGAAATTAAAGGCT TERM 469 465291 - 465248 - R 100 -15.6 -4.80737 | opp_overlap 465248 465253, overlap 465245 TAATATAAAAAATAA TATAAGAGAGTCTACTCAAT ATAT ACTGAGCTGACTCTCTTATA TTTGGGAAATTAAAG TERM 470 465248 - 465291 + r 95 -11.2 -3.57561 | opp_overlap 465248 465245, overlap 465253 TAATATAAAAAATAA TATAAGAGAGTCTACTCAAT ATAT ACTGAGCTGACTCTCTTATA TTTGGGAAATTAAAG ldhA 466356 - 465358 - | (R)-2-hydroxyisocaproate dehydrogenase hadA 467033 - 468232 + | isocaprenoyl-CoA:2-hydroxyisocaproate CoA-transferase hadI 468262 - 469071 + | activator of 2-hydroxyisocaproyl-CoA dehydratase hadB 469080 - 470312 + | subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase TERM 471 470448 - 470462 + G 74 -8.6 -3.32022 | AAATTATACATGCAG CTGGAA TGC TTCCAG TTGGTATATGGGGAG hadC 470312 - 471439 + | subunit of oxygen-sensitive 2-hydroxyisocaproyl-CoA dehydratase acdB 471487 - 472620 + | acyl-CoA dehydrogenase, short-chain specific etfB1 472653 - 473438 + | electron transfer flavoprotein beta-subunit etfA1 473457 - 474494 + | electron transfer flavoprotein alpha-subunit TERM 472 474644 - 474701 + F 100 -10.3 -5.21683 | gap 1 ATACAAGATAATCTG GATAATCCTTATATGTATATTGCTTACA AAT TGTGAGTTATATTC-TGTAAGGATTATC TTTGTTTTTTTAAAT TERM 473 475437 - 475423 - g 74 -8.6 -3.33035 | opp_overlap 475422 475423 TAGAAATATAACAGA CCTTGT GAG ACAAGG ATTAGTTGAAGAACC TERM 474 475423 - 475437 + G 70 -8.6 -2.60075 | opp_overlap 475423, overlap 475422 TAGAAATATAACAGA CCTTGT GAG ACAAGG ATTAGTTGAAGAACC CD0402 474965 - 476608 + | sigma-54-dependent transcriptional regulator TERM 475 476673 - 476713 + T 73 -4.3 -5.19275 | gap 1, opp_overlap 476673, overlap 476668 TTATACAACTTAAAA GAGATGGCTTAAAAATAA ATTTAA TTACTTT-AAGTCATCTC TTTTCTTTTATAAAT fba 477669 - 476743 - | putative fructose-bisphosphate aldolase TERM 476 477863 - 477875 + H 75 -7.7 -3.89354 | opp_overlap 477863 477862 477859 AATGCTAACTATAAG GGTAG GAA CTACC TTATTAGTTTGGAGA CD0404 477999 - 478328 + | hypothetical protein CD0405 478328 - 479050 + | putative RNA pseudouridine synthase CD0406 479068 - 480435 + | putative tRNA (Uracil-5-)-methyltransferase CD0408 480432 - 480590 + | hypothetical protein CD0408A 480597 - 480878 + | hypothetical protein TERM 477 480905 - 480928 + F 76 -4.6 -5.27938 | opp_overlap 480905 AAAATGGTTACCAAA GGCGATAG AAGAAAAA CTATCGTC TTTTTCTTTGCAAAT TERM 478 481355 - 481340 - g 81 -6.2 -5.08255 | overlap 481335 481343 481344 AGCGGTAAAAGAAAA TGACTT TCAG AAGTCA AAAAACTTAACTTCA TERM 479 481423 - 481406 - g 86 -7.1 -5.02357 | CAGAAGTAAAGAAAA TGAACTT CAGG AAGTTCA AAATCTTGACTCTAA CD0409 480966 - 481745 + | putative replication initiation protein CD0410 481742 - 482593 + | hypothetical protein CD0411 482590 - 483075 + | hypothetical protein TERM 480 483115 - 483161 + G 72 -4 -5.03994 | gap 2 AAGGCTTATTTAAGG TGCAAGATAAGGTAAAGTTTCT AAAGC AGA-ACATTCCC-TATCTTGCA TTTTTCTATATAGGC CD0412 483072 - 484856 + | putative conjugal transfer protein TERM 481 484851 - 484875 + F 100 -8.7 -5.7946 | opp_overlap 484858 GTTATTACAAGAATG CAGTAAGTCTT AAA AAGATTTGCTG TTTTTTTATTCAAAA TERM 482 484955 - 484983 + G 90 -4.6 -5.80364 | ATAGAAATAGTATCA GCGATTGGAA AAGTAATAC TTCCGGTCGC TTTTTTTATTGAAAT CD0412A 484903 - 484995 + | hypothetical protein CD0413 485020 - 485331 + | putative single-strand binding protein CD0414 485335 - 485550 + | putativel membrane protein CD0415 485569 - 486432 + | hypothetical protein CD0416 486450 - 486713 + | hypothetical protein TERM 483 486814 - 486833 + GF 76 -7.9 -3.88703 | overlap 486812 GCTTCACACTTGCAG GACTGGT TGGAAT ACCAGTC TATTTATTTATAAGG CD0417 486717 - 487106 + | hypothetical protein CD0418 487054 - 489447 + | putative conjugal transfer protein TERM 484 489942 - 489931 - g 77 -5.8 -4.92239 | TCAAAAAGCCAAAAA GCTC AAAA GAGC AGGTATAAGAGGAAA TERM 485 491121 - 491101 - g 80 -9.7 -3.26473 | CTAAAGCACTATGAA GCCTTGTTC CTT GCACAAGGC AATATGAGAGAAGCC CD0419 489451 - 491583 + | hypothetical protein CD0419A 491595 - 491834 + | hypothetical protein TERM 486 492081 - 492100 + G 74 -8 -3.80877 | opp_overlap 492080 492085, overlap 492085 GCTCCCAGATGATAT GAAATTCA TTGA TGAATTTC TGTTTTATGAGGTAA CD0420 491809 - 493350 + | putative cell surface protein TERM 487 493386 - 493415 + F 100 -10.8 -4.61873 | opp_overlap 493385 493388 TTTTGGGTGCAAAGT TAGGGCGGGAGA GTAACA TCTTTCGCCCTA TTTTGATTTATAACA CD0421 493445 - 495151 + | putative DNA topoisomerase TERM 488 495449 - 495418 - g 100 -15.4 -3.42861 | overlap 495412 AATGTATAACACGAA TTTTAATTCCCCCG AATT CGAGGGAATTAAAA ATGAAGCAGGTTTTA CD0422 495221 - 496039 + | hypothetical protein TERM 489 496066 - 496091 + F 79 -4 -5.63517 | opp_overlap 496066 496087 TTGGTATATAGCGAA GGTGATTAGA GTAAAA TCTAACCGCC TTTTTTGTTTGAAAA TERM 490 497328 - 497344 + G 73 -3.7 -5.30616 | opp_overlap 497328 GAAGCAGAGATAAGA GAAGC TGATAAT GCTTC TTTTTCTTTGCCTGA TERM 491 499875 - 499885 + G 70 -5.4 -4.63184 | opp_overlap 499872 CAGATTAAAGGACTG GAAG AAA CTTC TTTTTCCAATAACTT TERM 492 501505 - 501481 - g 73 -5.7 -4.67755 | ATATTGAGGGAAAAA GCAAGGACA GAGGAAA TGACCTTGC TGAAATGACCTACGG TERM 493 504145 - 504131 - g 82 -5 -5.39221 | AGAAGAATTAAAAAA GCCTTT TGA AAAAGC CGATGAGCTGAAAGG TERM 494 504357 - 504341 - g 74 -9.5 -2.73364 | overlap 504343 504345 CCCTGATTTGAAGCA TATAGGC ATC GCCTATA CCAATACACCCGATG CD0423 496122 - 504845 + | putative helicase TERM 495 504847 - 504862 + F 71 -6.8 -4.13767 | opp_overlap 504847 504846 AAATTTTAAGATAAG GGGAGG GCAA TCTCCC TTTTGCCATGAAAGG CD0424 504870 - 505547 + | putative single-strand binding protein TERM 496 505554 - 505584 + T 100 -10.5 -5.95539 | gap 1, opp_overlap 505553, overlap 505555 GAGAGATAAACTTAT G-GTCGGTGTGGTC TTGG GACTGCACCGACTC TTTTTTTATTTGCGA TERM 497 505555 - 505582 + T 100 -14.2 -4.61687 | opp_overlap 505553, overlap 505554 AGAGATAAACTTATG GTCGGTGTGGTC TTGG GACTGCACCGAC TCTTTTTTTATTTGC TERM 498 505622 - 505606 - T 100 -8.1 -5.41143 | TATTTGCGAAAAAAA GAGATAA AGA TTATCTC TCCATCTCCTTACCC CD0425 506947 - 505616 - | putative mobilization protein TERM 499 505698 - 505721 + g 86 -3.2 -5.89921 | GTGGATTTTGAGGAA GAATACTCTT GCAT AAGGCTATTC TTTTTTTCTTGTAAT TERM 500 506355 - 506368 + g 78 -6.7 -4.60073 | TTTAAAAATTCGTCC CAGTC CTTT GACTG TTTTATCATTCTGTC CD0426 507303 - 506953 - | putative mobilization protein TERM 501 507400 - 507376 - H 86 -5.8 -5.68039 | gap 2, opp_overlap 507375 507379 AAATTGATAAAAAAA GAAGCAGATCCC AAA GGG--CTGCTTC ATCAATTTTTCCGTA TERM 502 507413 - 507432 + H 78 -9.4 -2.94962 | overlap 507417 507423 TTCATCAATTTTTCC GTAAGTGT CCGT ACACTTAC TGTGCTTGCTCATAT TERM 503 507541 - 507520 - H 91 -10.3 -3.68709 | opp_overlap 507523, overlap 507514 507523 TAATATAAATCATAA TAAGTCAAG TAAA CTTGACTTA TTGACATATAGAATA TERM 504 507523 - 507538 + H 73 -7.6 -3.66844 | opp_overlap 507520 507514 507523 TATAAATCATAATAA GTCAAG TAAA CTTGAC TTATTGACATATAGA TERM 505 507538 - 507523 - H 75 -7.6 -3.94823 | opp_overlap 507523, overlap 507520 507514 TATAAATCATAATAA GTCAAG TAAA CTTGAC TTATTGACATATAGA CD0427 507601 - 507825 + | putative DNA-binding protein CD0428 507900 - 508880 + | AraC family transcription regulator TERM 506 508918 - 508955 + F 100 -13.1 -5.18357 | gap 1, opp_overlap 508918 GGGTAGTAAGAGAAA TACCTGTTCTTTGATAAA ATA TTTATCAAGG-ACAGGTA TTTTTTGCTGGATTA TERM 507 508955 - 508918 - f 100 -10.9 -4.23674 | gap 1, opp_overlap 508918 GGGTAGTAAGAGAAA TACCTGTTCTTTGATAAA ATA TTTATCAAGGA-CAGGTA TTTTTTGCTGGATTA TERM 508 509528 - 509542 + G 70 -5 -4.57474 | TGATATTAGTAGGAG TAGCTG TAA CAGTTA TTTTATCTGCATTAG CD0429 509017 - 509619 + | hypothetical protein TERM 509 509782 - 509794 + G 85 -7.7 -4.75289 | overlap 509772 509771 ATACTTCGGCTTTTA CAAGC AGA GCTTG TTTTATGTTGTGATA CD0430 509624 - 510316 + | hypothetical protein CD0431 510328 - 511800 + | ABC transporter, ATP-binding protein CD0432 511790 - 513520 + | ABC transporter, ATP-binding/permease protein CD0433 513521 - 515269 + | ABC transporter, ATP-binding/permease protein TERM 510 516208 - 516196 - g 70 -6.3 -4.15044 | TGTTGTCGGAACAAA CTTTG GAG CAAAG CAATATGATAGAGTA CD0434 515285 - 516637 + | putative drug/sodium antiporter TERM 511 517053 - 517082 + G 90 -7.2 -5.58074 | CACGAGAAGTATTTA GAGCAGGTGG ACAAGAAAAA CCACTTGCTC TTTTTTTCGTCATTG CD0435 516879 - 517364 + | putative sigma factor TERM 512 517381 - 517423 + F 100 -13.6 -4.42765 | overlap 517376 AAATACTCTGTATGT GAGGGCGGATTTTCCTTTAT AAA GTGAAGGGAGATCTGTCCTC TTTAATTTTTTAGAA CD0435A 517828 - 517974 + | hypothetical protein CD0436 518036 - 519802 + | putative recombinase TERM 513 519880 - 519910 + T 73 -6.9 -4.32177 | TAGATTTGCCACCTA TTTGCCACCATAA TTATT TTTGGGTGGCAAA TTTATTCTACAATGA CD0437 520127 - 519912 - | integrase (partial) CD0437A 520154 - 520309 + | hypothetical protein TERM 514 521073 - 521039 - g 85 -5.9 -5.39221 | gap 1, opp_overlap 521047 AGAACAATTAAAAAA TGATTACACTACTCAA GGAT TTGAG-AGTGCTATCA AAGGAGAAAGATTTG CD0438 520353 - 521387 + | hypothetical protein CD0439 521474 - 521677 + | hypothetical protein TERM 515 521682 - 521734 + F 100 -14.7 -3.55444 | opp_overlap 521681 521679 521690 521698, overlap 521686 521698 AACCTAAATAAATAT TTGATATACTAAGAAATAGACTGTT ACA AATAGTCTATTTTTTAGTATATAGA TTTAAAAAGTGACAA TERM 516 521686 - 521730 + F 100 -17.7 -2.64472 | opp_overlap 521681 521679 521690 521698, overlap 521682 521698 TAAATAAATATTTGA TATACTAAGAAATAGACTGTT ACA AATAGTCTATTTTTTAGTATA TAGATTTAAAAAGTG TERM 517 521726 - 521690 - f 76 -9.7 -2.92449 | opp_overlap 521686 521682 521698, overlap 521681 521679 521698 TAAATATTTGATATA CTAAGAAATAGACTGTT ACA AATAGTCTATTTTTTAG TATATAGATTTAAAA TERM 518 521698 - 521718 + F 93 -7.7 -5.24989 | opp_overlap 521690 521681 521679 521698, overlap 521686 521682 TGATATACTAAGAAA TAGACTGTT ACA AATAGTCTA TTTTTTAGTATATAG TERM 519 521880 - 521864 - g 70 -3.7 -5.04868 | opp_overlap 521864, overlap 521866 TGAAATTAAACAAAA CACTATT GGC AATAGGG ATGTCTGTTTCATTA TERM 520 522645 - 522635 - g 71 -3.2 -5.27923 | CAATTGCACAAAAAA CACC TAT AGTG TTAGTTGGAAATGGA CD0440 521848 - 523008 + | cell surface protein TERM 521 523365 - 523333 - f 73 -7 -4.16182 | overlap 523335 TTACGATAAATTAAA GAGCCACTCTGAGC GACCA ACTAAGAGTGGCTG GGAACTTAATATAAA TERM 522 523363 - 523335 - f 84 -9.6 -3.67003 | overlap 523333 ACGATAAATTAAAGA GCCACTCTGAGC GACCA ACTAAGAGTGGC TGGGAACTTAATATA CD0440A 523588 - 523751 + | regulatory protein (partial) TERM 523 524286 - 524269 - f 81 -5.7 -5.38951 | AATGTACATAAAAAA TATCATA AATA TATGATA AGATAAATACAATAG rocR 524357 - 525757 + | putative arginine utilization sigma-54 dependent regulatory protein TERM 524 525756 - 525737 - f 91 -5.2 -6.14618 | overlap 525750 TATAAAATAAAAAAA TATAATAT CAAA ATATTATA AATAAGCAAGATAAA TERM 525 525846 - 525829 - f 82 -8.5 -4.53607 | opp_overlap 525829 AAAATTATTATAAAA GAGCAAA ATAT TTTGCTC TTTTTTTTATTTCTC TERM 526 525829 - 525846 + F 100 -8.5 -6.28967 | opp_overlap 525829 AAAATTATTATAAAA GAGCAAA ATAT TTTGCTC TTTTTTTTATTTCTC TERM 527 525854 - 525871 + F 73 -5.7 -4.9072 | overlap 525863 TTTTGCTCTTTTTTT TATTTCT CATA AGAAATA TTATTTTTTATTTAT CD0442 526013 - 527080 + | putative oxidoreductase CD0443 527157 - 527465 + | hypothetical protein CD0444 527476 - 528888 + | putative pyridoxal-phosphate dependent enzyme oraS 528966 - 529340 + | D-ornithine aminomutase S component TERM 528 529710 - 529682 - g 83 -10.4 -3.48593 | overlap 529686 GATGGGCTTATAGAA GGAACTCCAC AAGGTATAG GTGGAGTTCC AATAACAAGAAAACA TERM 529 529961 - 529944 - g 70 -4.1 -4.90778 | overlap 529947 GTGAGGCAAAGAAAA TAATGGC TTTT GCCAATA TAGCTCAAATTGATG TERM 530 529958 - 529947 - g 73 -5.8 -4.5493 | overlap 529944 AGGCAAAGAAAATAA TGGC TTTT GCCA ATATAGCTCAAATTG TERM 531 531231 - 531217 - g 82 -8.6 -3.95214 | opp_overlap 531216, overlap 531215 AGGTATTGAAAAATA TGGCAT AGA ATGCCA CTATCTAGGGACTTC TERM 532 531313 - 531289 - g 100 -12.3 -3.19371 | AGCGATTGAACTGAA TGCAGATGCAA TAC TTGCATCTACA ATAATAAGTCATGAT oraE 529334 - 531538 + | D-ornithine aminomutase E component TERM 533 531857 - 531877 + G 77 -8.3 -3.7282 | opp_overlap 531844 531857, overlap 531844 AAGCAGCTAAAGAAG CAGCTTTAG GGG CTGGAGCTG TTATTCGTCAAATAA CD0447 531538 - 532947 + | putative component of D-ornithine aminomutase TERM 534 533277 - 533294 + G 71 -7.1 -3.75332 | AGTAAAAATATTATT CATAAGA TAGT TCTTATG TTTGACTTAGGAGAT CD0448 532932 - 533996 + | putative amino acid racemase CD0449 534026 - 535447 + | Na+/H+ antiporter TERM 535 535495 - 535519 + F 100 -15.9 -4.28977 | opp_overlap 535487 AAAAGATTTCTTTTA GACTTGCCTAA AAA TTAGGCAAGTC TTTTAAGTATGTTCT CD0450 535711 - 536175 + | hypothetical protein CD0451 536473 - 536835 + | hypothetical protein CD0452 536903 - 537517 + | putative DNA repair protein CD0453 537537 - 538166 + | putative phosphohydrolase CD0453A 538204 - 538320 + | hypothetical protein TERM 536 538478 - 538506 + G 100 -11.7 -4.56597 | opp_overlap 538478 TCCTGCCGCTTCAAA TGCCCTTGCCTTC CCT GACGGCAACGGCA TTTTTACGGCAACGC TERM 537 538506 - 538478 - g 95 -11.7 -3.53012 | opp_overlap 538478 TCCTGCCGCTTCAAA TGCCCTTGCCTTC CCT GACGGCAACGGCA TTTTTACGGCAACGC CD0453B 538317 - 538613 + | hypothetical protein CD0454 538777 - 539613 + | AraC family transcription regulator TERM 538 540784 - 540807 + G 70 -8.3 -3.06515 | opp_overlap 540797, overlap 540783 CAAATAAGATTTTTA TTCCAAAAG ACTACA CTTTTGGAA GTTTTACAGCTAAAA CD0455 539697 - 541811 + | hypothetical protein CD0456 544316 - 542073 - | putative antibiotic resistance ABC transporter,ATP-binding protein TERM 539 544598 - 544563 - H 100 -16.6 -4.23758 | opp_overlap 544563 ACTTGACATTTAAAA CTTACTATTGTAATAT TTAA ATATTACAATAGTAAG TTTTAAATAAAGAAT TERM 540 544563 - 544598 + H 100 -16.6 -4.18197 | opp_overlap 544563 ACTTGACATTTAAAA CTTACTATTGTAATAT TTAA ATATTACAATAGTAAG TTTTAAATAAAGAAT TERM 541 545167 - 545152 - g 76 -2.6 -5.62552 | AAAAAAATGAAAAAA CTAAAC AGAA ATTTAG ATGTAGTTAAAATTT CD0457 544648 - 545364 + | hypothetical protein TERM 542 545509 - 545494 - g 76 -2.6 -5.60556 | overlap 545496 AACACAAAACAAAAA CATGAT AAGA ATCATA TAAACTCTGAATTAA CD0458 545446 - 546318 + | putative beta-lactamase CD0459 546662 - 547345 + | ABC transporter, ATP-binding protein TERM 543 547394 - 547423 + G 73 -8.8 -3.14564 | opp_overlap 547394 547391, overlap 547398 GACGCAATAAACGTA GTAGTATAGCTA TAATGT TAGCTATATTAC TTACTACAACCATGA CD0460 547342 - 550002 + | ABC transporter, permease protein TERM 544 550187 - 550137 - T 70 -7.3 -3.75578 | gap 2, opp_overlap 550146 550147 550181, overlap 550139 550141 550143 550145 550147 ATAGATAACATAGAA TATAGATATAGCTGGATTATAGGTA TTT TACCTATAATCCAGC-ATTT-TATG TGTAAAATTTAATTG TERM 545 550185 - 550139 - T 87 -9.9 -3.44751 | gap 2, opp_overlap 550146 550147 550181, overlap 550137 550141 550143 550145 550147 AGATAACATAGAATA TAGATATAGCTGGATTATAGGTA TTT TACCTATAATCCAGC-ATTT-TA TGTGTAAAATTTAAT TERM 546 550184 - 550141 - T 87 -10.6 -3.28105 | gap 1, opp_overlap 550146 550147 550181, overlap 550139 550137 550143 550145 550147 ATAACATAGAATATA GATATAGCTGGATTATAGGTA TTT TACCTATAATCCAGC-ATTTT ATGTGTAAAATTTAA TERM 547 550182 - 550143 - T 100 -13.2 -3.19116 | gap 1, opp_overlap 550146 550147 550181, overlap 550141 550139 550137 550145 550147 AACATAGAATATAGA TATAGCTGGATTATAGGTA TTT TACCTATAATCCAGC-ATT TTATGTGTAAAATTT TERM 548 550180 - 550145 - T 100 -15.8 -3.14262 | gap 1, opp_overlap 550146 550147, overlap 550143 550141 550139 550137 550147 CATAGAATATAGATA TAGCTGGATTATAGGTA TTT TACCTATAATCCAGC-A TTTTATGTGTAAAAT TERM 549 550146 - 550180 + T 100 -17.4 -4.61199 | opp_overlap 550145 550143 550141 550139 550137 550147, overlap 550147 ATAGAATATAGATAT AGCTGGATTATAGGTA TTT TACCTATAATCCAGCA TTTTATGTGTAAAAT TERM 550 550147 - 550179 + T 100 -20.9 -3.35996 | opp_overlap 550147 550145 550143 550141 550139 550137, overlap 550146 TAGAATATAGATATA GCTGGATTATAGGTA TTT TACCTATAATCCAGC ATTTTATGTGTAAAA TERM 551 550179 - 550147 - T 100 -20.9 -3.11966 | opp_overlap 550146 550147, overlap 550145 550143 550141 550139 550137 TAGAATATAGATATA GCTGGATTATAGGTA TTT TACCTATAATCCAGC ATTTTATGTGTAAAA CD0461 551364 - 550183 - | two-component sensor histidine kinase TERM 552 550686 - 550700 + g 75 -7.2 -4.15066 | overlap 550688 AAGATGAAACTAGTC TCTCAA GTC TTGAGA TTTGATTTGTAAGTC CD0462 552026 - 551364 - | two-component response regulator TERM 553 551897 - 551907 + g 85 -2.6 -5.86332 | opp_overlap 551897 GAATTAAATCAATAG TTTT ATC AAAA TTTTTTTTAGCTTCA CD0463 552796 - 552158 - | TetR family transcriptional regulator TERM 554 552842 - 552826 - H 77 -5.2 -5.28176 | opp_overlap 552826 TCTATTGATAAAAAA GTATAC TGATG GTATAC TTATGTAAATATAAT CD0464 552975 - 553580 + | putative hydrolase TERM 555 553951 - 553970 + F 75 -3.6 -5.50723 | gap 1, overlap 553953 ATAAGTACTTTTTGG TG-CCTGCT TTT AGCAGGTTA TTTTTATTTTAATAA TERM 556 553953 - 553967 + F 100 -10 -4.80077 | overlap 553951 AAGTACTTTTTGGTG CCTGCT TTT AGCAGG TTATTTTTATTTTAA TERM 557 554766 - 554780 + G 74 -8.6 -3.22878 | overlap 554763 CTTATGAAGTCGTAG GAGCAT TTT ATGCTC TATTAGATTTGCTTC CD0465 554084 - 554833 + | transcriptional regulator CD0466 554830 - 555594 + | transcriptional regulator TERM 558 555648 - 555629 - f 77 -8 -4.10925 | opp_overlap 555629 ACATATTTTTTAAAA GATATCAA AATA TTGATATC TTTTTTTTTGAATGC TERM 559 555629 - 555648 + F 100 -8 -6.11644 | opp_overlap 555629 ACATATTTTTTAAAA GATATCAA AATA TTGATATC TTTTTTTTTGAATGC CD0467 555693 - 556514 + | putative hydrolase malL 556528 - 558192 + | oligo-1,6-glucosidase CD0469 558197 - 560071 + | PTS system, IIABC component blaR 562225 - 560426 - | putative beta-lactamase-inducing penicillin-binding protein blaI 562614 - 562228 - | penicillinase repressor CD0472 562847 - 563524 + | putative iron-sulfur flavoprotein CD0473 563536 - 563961 + | MarR family transcriptional regulator CD0474 564029 - 564808 + | putative iron-sulfur protein TERM 560 564989 - 565018 + T 93 -10.1 -4.10744 | opp_overlap 564989 TAATATAAAATAAAA GTGCCTCATAAAT AGAA GTTTTTGAGGCAC TTATTATTTGGCTAA TERM 561 565018 - 564989 - T 100 -9.4 -5.26907 | opp_overlap 564989 TAATATAAAATAAAA GTGCCTCATAAA TAGAAG TTTTTGAGGCAC TTATTATTTGGCTAA CD0475 565684 - 565058 - | hypothetical protein TERM 562 565822 - 565785 - R 75 -8 -3.93216 | opp_overlap 565794, overlap 565787 565794 TTGAAAGTATAATAA CATATAAAACATGACA ACAGAA TGTCATGTTTTATAAA TAATCTATCGCAACT TERM 563 565820 - 565787 - R 95 -12.8 -3.54602 | opp_overlap 565794, overlap 565785 565794 GAAAGTATAATAACA TATAAAACATGACA ACAGAA TGTCATGTTTTATA AATAATCTATCGCAA TERM 564 565794 - 565813 + r 75 -6.5 -4.44245 | opp_overlap 565787 565785 565794 TAATAACATATAAAA CATGACA ACAGAA TGTCATG TTTTATAAATAATCT TERM 565 565813 - 565794 - R 78 -6.5 -4.73633 | opp_overlap 565794, overlap 565787 565785 TAATAACATATAAAA CATGACA ACAGAA TGTCATG TTTTATAAATAATCT CD0476 566084 - 565827 - | hypothetical protein tlpB' 566237 - 566260 + | transposase-like protein B (remnant) CD0477 566410 - 566922 + | hypothetical protein TERM 566 567034 - 567064 + F 100 -9.2 -5.80951 | opp_overlap 567034 AAACATAAACTTAAA TAGAGTTGCCAA AATAAAA TTGGTAACTCTA TTTTTTATTTTAAAT TERM 567 567064 - 567034 - f 71 -7 -3.93913 | opp_overlap 567034 AAACATAAACTTAAA TAGAGTTGCCAA AATAAAA TTGGTAACTCTA TTTTTTATTTTAAAT spaF 567177 - 567881 + | putative lantibiotic ABC transporter,ATP-binding protein spaE 567878 - 568648 + | putative lantibiotic ABC transporter, permease protein spaG 568645 - 569421 + | putative lantibiotic ABC transporter, permease protein spaR 569476 - 570168 + | putative lantibiotic resistance two-component response regulator spaK 570187 - 571611 + | putative lantibiotic resistance two-component sensor kinase TERM 568 571721 - 571746 + T 75 -5.4 -5.06103 | opp_overlap 571721 TCGACAATGAAAAAA GGCTTATCTC TATTTT GAGACAGGCC TTTTTTAAAGCTTAT TERM 569 571746 - 571721 - T 81 -5.4 -5.32944 | opp_overlap 571721 TCGACAATGAAAAAA GGCTTATCTC TATTTT GAGACAGGCC TTTTTTAAAGCTTAT CD0483 574319 - 571851 - | ABC transporter, permease protein TERM 570 572622 - 572664 + g 71 -7.2 -3.71804 | opp_overlap 572628, overlap 572623 ACAGATAGAACCATT TTTAAAGTCTTCTAGTATAG AAT CTGTAATAGAAGGCATTAAG TCTTTTAAAGTTTGC TERM 571 573422 - 573436 + g 70 -5 -4.67556 | CATACTCTTTAATTT TCTTTG TAA CAGAGA TTTTTAAAATATTAT CD0484 574990 - 574322 - | ABC transporter, ATP-binding protein TERM 572 575024 - 574997 - R 100 -7.8 -5.39755 | opp_overlap 574997 TATAATCATAAAAAA CACTCTCCTTTT CTAT ATAAGAAGAGTG TAAGTTTTAAAACTC CD0485 576307 - 575165 - | two-component sensor histidine kinase CD0486 576987 - 576313 - | two-component response regulator TERM 573 577329 - 577340 + r 70 -3 -5.54192 | overlap 577317 AATTAGTTGATATAT CAAT TATT ATTG TTTTTTTCAGTTGCT TERM 574 577375 - 577386 + r 73 -4.4 -5.26875 | opp_overlap 577366 ATATACTTGATATAT CAAC TAAT GTTG TTTTTTAATTAAAAG CD0487 578636 - 577809 - | putative carbon-nitrogen hydrolase TERM 575 578936 - 578971 + H 93 -9.2 -4.63486 | opp_overlap 578939, overlap 578939 AACACGGAAGGACAA AAACCTGGGAGATATT TTAT AATATTTCTCAGGTTA TTTTATTGGAAAAAT TERM 576 578968 - 578939 - H 80 -6.5 -4.98857 | opp_overlap 578939 578936 ACGGAAGGACAAAAA CCTGGGAGATATT TTAT AATATTTCTCAGG TTATTTTATTGGAAA TERM 577 578939 - 578968 + H 100 -10.9 -4.43307 | opp_overlap 578939, overlap 578936 ACGGAAGGACAAAAA CCTGGGAGATATT TTAT AATATTTCTCAGG TTATTTTATTGGAAA sugE 579018 - 579338 + | quaternary ammonium compound-resistance protein CD0489 580151 - 579471 - | putative phosphoribosylaminoimidazole-succinocarboxamide synthase CD0490 580547 - 581599 + | putative sugar-phosphate dehydrogenase CD0491 581655 - 582062 + | PTS system, IIA component CD0492 582091 - 582564 + | PTS system, IIB component CD0493 582611 - 583369 + | PTS system, IIC component CD0494 583393 - 584232 + | PTS system, IID component TERM 578 585482 - 585506 + F 83 -6.5 -5.27206 | opp_overlap 585482 AATACATATAAAGAG CCATTTGATTT TTC ATATCAAGTGG TTTTTGTTATGTATA TERM 579 585528 - 585568 + F 72 -4.1 -5.41746 | gap 1, opp_overlap 585530, overlap 585530 TTATGTATATGGAGC AAGACGCTTACTAATTCC ATTATG GGAAATAG-GAGCGTCTA TTTTTTTACCCAATT TERM 580 585530 - 585566 + F 73 -6.7 -4.34482 | gap 1, opp_overlap 585530, overlap 585528 ATGTATATGGAGCAA GACGCTTACTAATTCC ATTATG GGAAATAG-GAGCGTC TATTTTTTTACCCAA orf23 585695 - 586009 + | conjugative transposon protein orf22 586031 - 586417 + | conjugative transposon protein orf21 586451 - 587836 + | conjugative transposon FtsK/SpoIIIE-family protein TERM 581 587897 - 587877 - g 81 -10.4 -3.09834 | CACGCCAGCACTTAA CCCCCCGT ATCTA ACAGGGGG GTACAAATCGACAGG CD0498A 587839 - 587991 + | hypothetical protein TERM 582 587969 - 588006 + F 70 -5 -4.8622 | GATTTAGAAAATTTC GGTGTATGTCAAAT GAGCTTTAAA AGTTGACATACGCC TTTTTGATTGGAGGA orf20 588010 - 589218 + | putative conjugative transposon replication initiation factor orf19 589261 - 589482 + | conjugative transposon protein orf18 589599 - 590096 + | conjugative transposon protein TERM 583 590137 - 590159 + F 93 -9.9 -4.03995 | overlap 590134 GAGTTTCTTGTTTGC GGGGTAGCT TAAAC AGCTATCCC TATTTTTATGAAAGG orf17 590184 - 590576 + | conjugative transposon membrane protein orf16 590560 - 593007 + | conjugative transposon ATP/GTP-binding protein TERM 584 593059 - 593094 + G 100 -9.2 -5.45802 | gap 1, opp_overlap 593059 593058 AGCGTCTAAATAAAG TGGCAATGAC-AGTGGT TTT ATCACTCGTGATTGCCA TTTTTCTTTTAGCAA TERM 585 594522 - 594505 - g 75 -9.1 -2.89981 | overlap 594498 CACAAGCAGATCACA CCCGTCC AGAC GGACAGG AAAAATCAACACTTG TERM 586 594798 - 594772 - g 100 -13.8 -4.34811 | overlap 594763 AACAAAGACGCAAAA CCATTGCAGAGC GTC GCTCTGAAATGG AACAGGTCAAACAGA orf15 593007 - 595175 + | conjugative transposon membrane protein TERM 587 596918 - 596930 + G 74 -9.1 -2.80821 | opp_overlap 596917, overlap 596915 AACTCTATCAATTAT CTGCC GAA GGCAG TCATGTGTTTAGAGA TERM 588 597271 - 597250 - g 71 -5.9 -4.41047 | opp_overlap 597251, overlap 597251 ATTTTGGAAGCAAAA TTCCATAAG CATT CTTATGGAT TTCGACCAGAAAGAA TERM 589 597251 - 597270 + G 79 -9.4 -3.53012 | opp_overlap 597250 597251 TTTTGGAAGCAAAAT TCCATAAG CATT CTTATGGA TTTCGACCAGAAAGA TERM 590 597270 - 597251 - g 78 -9.4 -3.24146 | opp_overlap 597251, overlap 597250 TTTTGGAAGCAAAAT TCCATAAG CATT CTTATGGA TTTCGACCAGAAAGA CD0506 596830 - 598659 + | group II intron reverse transcriptase/maturase orf14 595172 - 598820 + | putative cell wall hydrolase orf13 598817 - 599749 + | putative conjugative transposon exported protein TERM 591 599964 - 599993 + F 87 -6.5 -5.35222 | gap 1, overlap 599965 GGGTTAGTTTTTTGT ACCCAGTGATAAGA GTA TCT-GTCACTGGGA TTTTTTATGCCTTTT TERM 592 599965 - 599992 + G 86 -10 -3.78693 | gap 1, overlap 599964 GGTTAGTTTTTTGTA CCCAGTGATAAGA GTA TCT-GTCACTGGG ATTTTTTATGCCTTT orf12 599965 - 600018 + | tet(M) leader peptide TERM 593 600400 - 600389 - g 77 -5.8 -4.9448 | ATGCACTAAATAAAA TGGG TATT CCCA CAATCTTTTTTATCA TERM 594 601079 - 601026 - g 81 -8.3 -4.12532 | gap 1, overlap 601030 TCTTGGAGATACAAA GCTATT-GCCACAGAGAGAGAGAATT GAA AATCCGCTCCCTCTGCTGCAAACAAC TGTTGAACCGAGCAA TERM 595 601074 - 601030 - g 100 -13.7 -2.74987 | overlap 601026 GGAGATACAAAGCTA TTGCCACAGAGAGAGAGAATT GAA AATCCGCTCCCTCTGCTGCAA ACAACTGTTGAACCG tetM 600034 - 601953 + | conjugative transposon tetracycline resistance protein orf6 602106 - 602234 + | conjugative transposon protein TERM 596 602234 - 602274 + T 100 -12.7 -4.53648 | opp_overlap 602231 602230, overlap 602230 AGACGCAAAGACGCA GAGCCGATAATCTGAGATT AGC ATTCTCATTTTATCGGCTC TTTCTGTTTTATGTA orf9 602655 - 602302 - | putative conjugative transposon regulatory protein TERM 597 602501 - 602511 + g 71 -4.6 -4.71418 | AGGACTTGTATGCTT GGGT GTT GCCC TTTATTTTCAATATT orf10 602866 - 602931 + | putative conjugative transposon protein TERM 598 602985 - 603018 + F 84 -4.7 -5.77988 | opp_overlap 602985 ACAAGAATAATTAAA GCATATAAACAGA GAAATCAA TCTGTCTATGTGC TTTTTTTGTATCTCT TERM 599 603125 - 603115 - f 77 -6.8 -4.6468 | opp_overlap 603114, overlap 603122 603123 TGAAAGGAGATAAAA GAGC AAA GCTC ACTTCCTTTCCAAAG TERM 600 603152 - 603123 - f 78 -9.3 -3.0549 | opp_overlap 603114, overlap 603115 603122 GATAAAAGAGCAAAG CTCACTTCCTTTC CAAA GAAAGGGGGTGAG AAACATGAAACCATC orf7 603157 - 603582 + | putative conjugative transposon regulatory protein orf8 603579 - 603809 + | conjugative transposon protein TERM 601 603892 - 603878 - T 75 -7.8 -4.00512 | overlap 603876 TTCGATAAGAAAAGA GCCAGC GGA GCTGAC CGCCATGACCTATCC orf5 604116 - 603934 - | conjugative transposon protein (partial) tndX 604427 - 606028 + | conjugative transposon site-specific recombinase CD0513 606589 - 606777 + | hypothetical protein TERM 602 606794 - 606823 + F 86 -9.5 -4.04576 | opp_overlap 606788 606786 606800, overlap 606795 606798 CAAGAAATATCTTTT CTAAGAGCATATT GTAC AATATGCTCTTAA TTTAGTTATATAGAT TERM 603 606795 - 606822 + F 93 -13 -3.02023 | opp_overlap 606788 606786 606800, overlap 606794 606798 AAGAAATATCTTTTC TAAGAGCATATT GTAC AATATGCTCTTA ATTTAGTTATATAGA TERM 604 606798 - 606819 + F 91 -10.3 -3.64257 | opp_overlap 606788 606786 606800, overlap 606795 606794 AAATATCTTTTCTAA GAGCATATT GTAC AATATGCTC TTAATTTAGTTATAT TERM 605 606960 - 606983 + F 87 -6.8 -5.36441 | opp_overlap 606960 AATTTAATAAAAAAT GACTTGGAAT TTAT ATTCTAGGTC TTTTTTATATAAAAA TERM 606 607260 - 607285 + F 70 -2.7 -5.60993 | gap 1, opp_overlap 607260 TTATTTGTAAAAAGA GTAGCACTTT TAATTCT AAAG-GCTAC TTTTTTTATACAAAA CD0514 607561 - 612429 + | cell surface protein (putative hemagglutinin/adhesin) TERM 607 612867 - 612885 + T 73 -7.4 -4.02132 | opp_overlap 612869, overlap 612869 TGTAAAAAACAAAAA AACTCCAC AAA GTGGAGTC TTTATAAATTTAACA TERM 608 612883 - 612869 - T 100 -10 -6.28401 | opp_overlap 612869 612867 TAAAAAACAAAAAAA CTCCAC AAA GTGGAG TCTTTATAAATTTAA TERM 609 612869 - 612883 + T 89 -10 -3.59995 | opp_overlap 612869, overlap 612867 TAAAAAACAAAAAAA CTCCAC AAA GTGGAG TCTTTATAAATTTAA CD0515 614168 - 612924 - | D-alanyl-D-alanine carboxypeptidase CD0516 617045 - 614211 - | putative transcription antiterminator TERM 610 614727 - 614741 + g 73 -5.8 -4.52415 | opp_overlap 614727 614726 AACAACTGCCAGAAT TTTAGT ATT ACTAAA TTTATTCTTATACAT TERM 611 615377 - 615394 + g 74 -7.1 -3.96827 | ATATAAATTTTACTT CATCTTT AGGT AAAGATG TTTGTAAGTCATTTT CD0517 617711 - 618508 + | hypothetical protein CD0518 618509 - 619003 + | hypothetical protein TERM 612 619092 - 619051 - f 86 -7.6 -4.82162 | opp_overlap 619056 TATAATAACATAAAA TAGAATAAGAGTATCC AAATTAAAGA GGATATTCTTATTCTA TAAACGTAATTTTTT TERM 613 619429 - 619441 + G 71 -7.7 -3.5332 | overlap 619424 GGCAGTTCTTGCAGG TGCAC TTA GTGCA TTGCTTTCAGAGTTT CD0519 619229 - 620407 + | hypothetical protein TERM 614 620501 - 620546 + F 100 -10.8 -4.39386 | gap 1, opp_overlap 620501 TAATTTAAATATATA GGTGCTGTTTTGAAATAGAGA TTTAT TTTC-ATTTTAAGACAGCACC TTTTAGTAATTTAAG TERM 615 620782 - 620799 + G 76 -6.3 -4.57569 | TGGTTATGACAATTG CTACTGG AATA TCAGTAG TTTTTGAAAAGGTAG TERM 616 621151 - 621140 - g 83 -3 -5.77571 | opp_overlap 621140 AGCAAAAAATAAAAA TCAA ATTA TTGA ATTTTGTGGGTCTAA TERM 617 621210 - 621190 - g 71 -6.9 -3.89041 | ATATATTAAATAGAA CTGTAATAG TGA CTATTGCAG ATGAGAATAATAATC TERM 618 621986 - 621974 - g 71 -4.9 -4.72846 | GCATACACCTAAAAA TTCTA AGA TAGAA CTAACTGTAAAAAAA CD0520 620661 - 622268 + | two-component sensor histidine kinase CD0521 622259 - 622963 + | two-component response regulator TERM 619 624030 - 624010 - f 74 -4.7 -5.1675 | opp_overlap 624010, overlap 623993 CTATTTACTAAAAAA TAGAACCTC ATT AAGGTACTA TTTTAAAACATAAAG TERM 620 626208 - 626224 + G 71 -3 -5.25803 | ATGTTGTCGTATGTA TGCAGA TGTAT TTTGCA TTTTTTATGAGAGTT TERM 621 626618 - 626608 - g 74 -5.4 -4.87665 | GTTCATCCAGAAAAA GGTA TAA TACC TCCAATTAAATTTAT CD0522 624136 - 627234 + | putative signaling protein CD0523 627357 - 628643 + | putative transcriptional regulator CD0524 630032 - 629022 - | putative peptidase TERM 622 631225 - 631239 + r 75 -8.6 -3.57615 | opp_overlap 631225, overlap 631235 CTATAGTCATTACAA CAAGAG TTA CTCTTG TTTCAGGAATCTTGC TERM 623 631239 - 631225 - R 74 -8.6 -3.43492 | opp_overlap 631225 631235 CTATAGTCATTACAA CAAGAG TTA CTCTTG TTTCAGGAATCTTGC CD0527 632717 - 631971 - | metallo-beta-lactamase superfamily hydrolase CD0528 634239 - 632929 - | putative amidohydrolase TERM 624 632956 - 632970 + g 73 -3.6 -5.1861 | overlap 632951 ATCGTGTTTTTCTAA GAATGT TAG ATATTC TTTTTTAGTCATAAC TERM 625 634168 - 634178 + g 76 -2.6 -5.53079 | GTATATTCCTTGACC TATT TTT AATA TTTTTTCTCTATTTT CD0529 634722 - 634252 - | hypothetical protein TERM 626 634580 - 634563 - G 76 -9.9 -2.83119 | opp_overlap 634562 634565, overlap 634560 634565 634577 AATCTTTTATAATCA TAGCTGC CATA GCAGCTA ATATTAGCATCACCA CD0530 635577 - 634726 - | hypothetical protein CD0531 636501 - 637412 + | DeoR family transcriptional regulator TERM 627 637896 - 637862 - g 72 -6.7 -4.11664 | opp_overlap 637868, overlap 637864 TTTAGAAGAATTAAA CACTAATAATACTGT TGGAG AAAGTATTATTAGTA AAGTTATACCAGCAG CD0532 637587 - 638084 + | hypothetical protein TERM 628 638188 - 638162 - f 95 -12.5 -3.57039 | opp_overlap 638162 TATTTATAACTATAA GCAGTAAATCT GTAAA AGATTTACTGC TTTTTTAGTAATTAA TERM 629 638162 - 638188 + F 100 -12.5 -5.2189 | opp_overlap 638162 TATTTATAACTATAA GCAGTAAATCT GTAAA AGATTTACTGC TTTTTTAGTAATTAA TERM 630 638329 - 638317 - f 73 -2.7 -5.69023 | opp_overlap 638317 AAAATATGAAAAAAA GTATT ATA AACAC ATTAGAATACTTCTG cheB 638828 - 639190 + | chemotaxis protein TERM 631 639206 - 639193 - f 75 -5.3 -5.07652 | TGCTTTAAAATAAAA GTGTA AATA TACAC TAATACAATGAAAAG cheC 639255 - 639872 + | chemotaxis protein CheC TERM 632 640140 - 640130 - g 72 -5.4 -4.69028 | AGAATATATATAAAA GCAA AAA TTGC TGGAGGTGCTCAGAT cheD 639869 - 640354 + | chemotaxis protein cheW 640397 - 640915 + | chemotaxis protein TERM 633 641166 - 641156 - g 76 -5.4 -5.09426 | TTTAAGGTTAAAAAA GCAT TTA ATGC AATAGAGGCAAAAGA TERM 634 641231 - 641244 + G 76 -6.7 -4.4595 | CTTGATATAATTTTA CCAGA TAAT TCTGG TTTTGAGTTTTGTAA CD0537 641051 - 642010 + | putative chemosensory protein TERM 635 642063 - 642081 + G 71 -6.8 -3.89291 | opp_overlap 642063 642066 GTAAAGCTTTCTAAA TTAGCAAT TGT ATTGCTGA TTATTATAGTATTGG CD0538 642036 - 643739 + | putative methyl accpeting chemotaxis protein cheA 643952 - 646054 + | chemotaxis protein TERM 636 646171 - 646146 - g 76 -9.9 -2.59891 | overlap 646144 646145 TAGAATTAGAAAATG TGATTGAAACC ATAA GATTTCAATCA ATAACGTATGTACCA CD0540 646067 - 646507 + | chemotaxis protein TERM 637 647152 - 647173 + G 77 -4.5 -5.252 | TTAATGAATGATTTC TCATATCAA CATT TTGATTTGA TTTTTTGTAGAAATG cheR 646543 - 647346 + | chemotaxis protein methyltransferase CD0542 647386 - 647982 + | putative chemotaxis-related protein-glutamate methylesterase TERM 638 648005 - 647977 - f 85 -6.3 -5.46706 | opp_overlap 647972 647977 ATTTTAAAACAAAAA GATTAATTTTT TATAAAT AAAAATTAATC TTTTATTAAATTATA TERM 639 647977 - 648005 + F 76 -6.3 -4.73635 | opp_overlap 647977, overlap 647972 ATTTTAAAACAAAAA GATTAATTTTT TATAAAT AAAAATTAATC TTTTATTAAATTATA CD0543 648088 - 648951 + | hypothetical protein CD0544 649018 - 650007 + | ornithine cyclodeaminase CD0545 650099 - 650710 + | putative lipoprotein TERM 640 650727 - 650772 + F 75 -5.7 -5.08255 | overlap 650731 TTATTTTAAAGACAC AAAACTATCTTTTAAGCATAT AATA AAATGTTTGGAAGATAGTTTA TTTTATTTTCAAAGT TERM 641 650731 - 650768 + F 80 -6.5 -5.04377 | overlap 650727 TTTAAAGACACAAAA CTATCTTTTAAGCATAT AATA AAATGTTTGGAAGATAG TTTATTTTATTTTCA CD0546 651171 - 651950 + | hypothetical protein TERM 642 652018 - 652049 + F 100 -7.6 -5.29445 | gap 1, opp_overlap 652018 ATAACATTGATAAAA CTGTCTTTTATAAGA ATT TTTTA-AAAAGACAG TTTTTATTATTAAAA CD0547 652155 - 652514 + | putative penicillin-binding protein repressor CD0548 652525 - 653907 + | putative penicillin-binding protein TERM 643 653988 - 653941 - f 81 -10.3 -2.67709 | opp_overlap 653946, overlap 653946 TAAAAGATTTAGAAT TAAAATACTATCTCAAAATAA TTAATT TTGTTTTGAGATAGTATTTTT TATTGAAAAGTTTTT TERM 644 653946 - 653983 + F 100 -12.4 -5.4505 | opp_overlap 653941 653946 GATTTAGAATTAAAA TACTATCTCAAAATAA TTAATT TTGTTTTGAGATAGTA TTTTTTATTGAAAAG TERM 645 653983 - 653946 - f 100 -10.2 -4.50058 | opp_overlap 653946, overlap 653941 GATTTAGAATTAAAA TACTATCTCAAAATAA TTAATT TTGTTTTGAGATAGTA TTTTTTATTGAAAAG CD0549 654123 - 654533 + | hypothetical protein TERM 646 654652 - 654613 - f 82 -8.8 -4.1347 | overlap 654615 CTGTAATGATATAAA CATGCAGTTGATGATTAT TTAA ATAATTATCAACTGCACT ACCCAAATAACACTT TERM 647 654650 - 654615 - f 100 -13.6 -3.66117 | overlap 654613 GTAATGATATAAACA TGCAGTTGATGATTAT TTAA ATAATTATCAACTGCA CTACCCAAATAACAC TERM 648 654853 - 654896 + F 100 -14.4 -6.36459 | opp_overlap 654853 654856 654894 ATTAAACCCAATTTA TAATGTTAACATTTTTTAAT GTAT GTTAAGAAATGTTAACATTA TTTTTTTTTCTTAAA TERM 649 654896 - 654853 - f 86 -11.5 -2.59079 | opp_overlap 654853, overlap 654856 654894 ATTAAACCCAATTTA TAATGTTAACATTTTTTAA TGTATG TTAAGAAATGTTAACATTA TTTTTTTTTCTTAAA TERM 650 654893 - 654856 - f 77 -8.8 -3.43965 | opp_overlap 654853, overlap 654853 AAACCCAATTTATAA TGTTAACATTTTTTAA TGTATG TTAAGAAATGTTAACA TTATTTTTTTTTCTT CD0550 655805 - 656461 + | hypothetical protein sleC 658240 - 656969 - | putative spore cortex-lytic enzyme pre-pro-form (putative spore peptidoglycan hydrolase) TERM 651 658280 - 658305 + H 70 -6.3 -4.22375 | TTTAGTTCCCTTATA TTTCAAGATAT GAAT ATAGCTTGAAA TTTGTTAAATAATAT sleB 658485 - 659201 + | putative spore-cortex-lytic protein TERM 652 660251 - 660239 - g 89 -3.5 -6.13503 | TAGTAATAAAAAAAA TAAAT TTT ATTTA AGAGGAGAAAATTTG CD0553 659280 - 660590 + | putative methylase sip2 660690 - 661226 + | signal peptidase I sip2 661392 - 661928 + | singal peptidase I CD0556 661929 - 662693 + | putative endonuclease TERM 653 662836 - 662826 - g 72 -5.4 -4.81212 | overlap 662805 TTCATTAGAAGAAAA TTCC CCT GGAA TCAGATTGGGAGATA CD0557 662767 - 664434 + | putative phosphoribulokinase/uridine kinase TERM 654 664571 - 664600 + F 100 -10.9 -5.49568 | opp_overlap 664570 664571 TTGATATATAAAAAG GCTTGTTTTATAC TTTT GTATGAAGCAAGC TTTTTATTTTAAATT glsA 664959 - 665888 + | glutaminase TERM 655 666484 - 666472 - g 70 -6.3 -4.06281 | ATTTTAAATAAAAGA CAACA CAA TGTTG AAGGTTCTAAGTATG CD0559 665986 - 666549 + | hypothetical protein nfo 667037 - 667873 + | endonuclease IV CD0561 668172 - 669167 + | putative aldo/keto reductase TERM 656 669180 - 669210 + T 95 -8.4 -5.12068 | opp_overlap 669184 TAGATTTTATTTATT GAAATCGGTGTA TTAAATT TACTCCGATTTC TTTTTATTAGATGTG TERM 657 669284 - 669236 - T 73 -8.7 -2.87211 | opp_overlap 669236 669240 669283, overlap 669240 ATGTGGTCTTATATA CAAATATTAAATTTACATAGT TATAGCT ATTATATAAATTTAATATTTG TTTAATACTTATTAA TERM 658 669236 - 669284 + T 81 -8.7 -3.89131 | opp_overlap 669236 669240, overlap 669240 669283 ATGTGGTCTTATATA CAAATATTAAATTTACATAGT TATAGCT ATTATATAAATTTAATATTTG TTTAATACTTATTAA CD0562 669840 - 669424 - | putative endonuclease TERM 659 670823 - 670810 - H 73 -2.5 -5.69023 | AAAAGACTAAAAAAA TTAAA TAAA TTTAA AAAGTCAATTAGATT CD0563 670855 - 671769 + | putative iron-sulfur cluster protein CD0564 671875 - 674112 + | putative ATP-binding protein TERM 660 674154 - 674177 + F 90 -6.8 -5.65177 | opp_overlap 674154 TATGTATAATAAAAA GCAAGAACTT TAAT AGGTTTTTGC TTTTTTTGTAAATAT nth 674755 - 675360 + | endonuclease III TERM 661 675636 - 675615 - g 83 -8.8 -4.05193 | overlap 675618 CAGGAAATATAATAA GAACCTGT GCAGCA ACAGGTTC AACTTTACATTTAGT CD0566 675554 - 676024 + | putative RNA methylase TERM 662 676094 - 676074 - g 71 -6.9 -4.02315 | AATGAAAAATCTAAA GATAATCTG TGA CAGTTTATC GGACGTGCCAAAAGA CD0567 676060 - 676908 + | hypothetical protein TERM 663 677036 - 677066 + F 90 -7.1 -5.31275 | gap 1, opp_overlap 677036 677045 TTAGTTTGTAGGGAA GTGTGTAAATAGAT AAGA ATCTATT-GCACAC TTTTTTATAGTAAGA TERM 664 677583 - 677564 - g 82 -4.4 -5.54192 | gap 1, opp_overlap 677564 AGTAATTCAAAAAAA TCT-GTATC AAT GATACTAGA TATTGAAGGAACAAA TERM 665 677694 - 677675 - g 76 -6.4 -4.66625 | opp_overlap 677674, overlap 677677 ATAGATACAAACAAA GTGGAATC AGAT GATTCCTC AACTTTTTCTAATAG CD0569 677417 - 678421 + | putative outer membrane lipoprotein CD0570 678547 - 679659 + | putative outer membrane lipoprotein TERM 666 680028 - 679999 - f 82 -8.7 -4.07515 | gap 1, opp_overlap 679999 AAATTATAACAATAA GTGTGTGGGCAGAA AAA TTCTGCT-ACACAC TTTATTTATATTCAC TERM 667 679999 - 680028 + F 100 -10.9 -4.68511 | gap 1, opp_overlap 679999 AAATTATAACAATAA GTGTGTGGGCAGAA AAA TTCTGC-TACACAC TTTATTTATATTCAC CD0571 680082 - 680843 + | hypothetical protein CD0572 680846 - 681664 + | hypothetical protein CD0573 681844 - 682446 + | putative membrane protin TERM 668 683388 - 683411 + F 100 -11.8 -5.4505 | opp_overlap 683386 683388 AACCGCGAATTAATA TCGTCCCAAA CATA TTTGGGGCGA TTTTTTATTACAAAA TERM 669 683411 - 683388 - f 80 -9.6 -3.24597 | opp_overlap 683388, overlap 683386 AACCGCGAATTAATA TCGTCCCAAA CATA TTTGGGGCGA TTTTTTATTACAAAA thrS 683462 - 685381 + | threonyl-tRNA synthetase TERM 670 685486 - 685530 + F 100 -14.8 -5.39721 | gap 1, opp_overlap 685486 685487 685489, overlap 685487 AAAAGATGAGTATAA TTAGAGGTACAGTTAATCATA TTTT TATGATTAA-TGTACCTCTAG TTTTTTGTATGGTAG TERM 671 685530 - 685486 - f 95 -12.6 -3.48981 | gap 1, opp_overlap 685486 685487, overlap 685487 685489 AAAAGATGAGTATAA TTAGAGGTACAGTTAATCATA TTTT TATGATTAA-TGTACCTCTAG TTTTTTGTATGGTAG TERM 672 685487 - 685529 + F 100 -16.1 -3.82748 | gap 1, opp_overlap 685486 685487 685489, overlap 685486 AAAGATGAGTATAAT TAGAGGTACAGTTAATCATA TTTT TATGATTAA-TGTACCTCTA GTTTTTTGTATGGTA TERM 673 685529 - 685487 - f 100 -16.1 -2.68304 | gap 1, opp_overlap 685487 685486, overlap 685486 685489 AAAGATGAGTATAAT TAGAGGTACAGTTAATCATA TTTT TATGATTAA-TGTACCTCTA GTTTTTTGTATGGTA TERM 674 685527 - 685489 - f 100 -14.3 -2.8751 | gap 1, opp_overlap 685487 685486, overlap 685487 685486 AGATGAGTATAATTA GAGGTACAGTTAATCATA TTTT TATGATTAA-TGTACCTC TAGTTTTTTGTATGG CD0575 686149 - 687240 + | hypothetical protein TERM 675 687342 - 687385 + F 78 -4.3 -5.5208 | gap 2, opp_overlap 687345, overlap 687343 TTTAAAAACAATAAT TTAGAAGTACAGTTAATTATA TTTT TATGA-TA-CTGTACTTCTAG TTTTTTCTATTGTAG TERM 676 687386 - 687436 + F 100 -10.9 -4.77567 | opp_overlap 687421, overlap 687387 687389 ATACTGTACTTCTAG TTTTTTCTATTGTAGATTTATTA TTTAC TAATAAATCTACAATAGAAATGC TTTTGTTGTAAGAAT TERM 677 687387 - 687435 + F 100 -14.4 -3.45817 | opp_overlap 687421, overlap 687386 687389 TACTGTACTTCTAGT TTTTTCTATTGTAGATTTATTA TTTAC TAATAAATCTACAATAGAAATG CTTTTGTTGTAAGAA TERM 678 687389 - 687433 + F 100 -19.2 -3.29584 | opp_overlap 687421, overlap 687387 687386 CTGTACTTCTAGTTT TTTCTATTGTAGATTTATTA TTTAC TAATAAATCTACAATAGAAA TGCTTTTGTTGTAAG CD0576 687910 - 689250 + | two-component sensor histidine kinase TERM 679 689858 - 689873 + T 74 -4.8 -5.18726 | opp_overlap 689869, overlap 689869 TTTATTATATAGTGA GTTTAA AATA TTAAAC TTTTTATTCTACAAA TERM 680 689941 - 689898 - T 70 -3.3 -5.32599 | gap 1, opp_overlap 689898 TACAAAATATAAAAA GAAGTTGCATC-AAAAAGAG AAATG CTCTTTAAAGATGTAACTTC TATGGTATATGTATG CD0577 690532 - 689963 - | hypothetical protein CD0578 691943 - 690693 - | putative efflux protein CD0579 692821 - 692234 - | TetR family transcriptional regulator TERM 681 692842 - 692877 + H 90 -12.2 -2.96183 | opp_overlap 692842 692839 692844, overlap 692833 692844 TCTATCTATATATGA TATCTATGACTTTAAA AATA TTTTAAGTCATAGATA TATAATATTGTCTAC TERM 682 692877 - 692842 - H 88 -12.2 -2.7035 | opp_overlap 692833 692842 692844, overlap 692839 692844 TCTATCTATATATGA TATCTATGACTTTAAA AATA TTTTAAGTCATAGATA TATAATATTGTCTAC TERM 683 692844 - 692875 + H 85 -10.4 -3.02782 | opp_overlap 692844 692842 692839, overlap 692842 692833 TATCTATATATGATA TCTATGACTTTAAA AATA TTTTAAGTCATAGA TATATAATATTGTCT TERM 684 692875 - 692844 - H 82 -10.4 -2.89475 | opp_overlap 692842 692833 692844, overlap 692842 692839 TATCTATATATGATA TCTATGACTTTAAA AATA TTTTAAGTCATAGA TATATAATATTGTCT TERM 685 693523 - 693510 - g 80 -6.7 -4.74013 | GCCAAAGACATAAAA TCTGC AAGG GCAGA AGTTGAGAGAACAGC gapN 693198 - 694658 + | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase TERM 686 695011 - 694999 - f 100 -9.1 -5.26158 | TAAATAAAAAAGAAA CGACC AGT GGTCG CTAAAAGGAGGTATC CD0581 695005 - 695637 + | TetR family transcriptional regulator TERM 687 696629 - 696649 + G 74 -9.1 -2.75267 | opp_overlap 696628, overlap 696625 ATACACAAAGGGAAG TTTGGCAGA ACA TTTGCCAAA TCCTGTTACACCTTT TERM 688 696886 - 696872 - g 78 -10 -3.20858 | TAGGACACTTATGAA CAGCGT TGC ACGCTG GGAAACGGCACGAAA TERM 689 697105 - 697116 + G 70 -5.8 -4.35742 | opp_overlap 697105 GACGTGCTGGTATAA CGGA TACT TCCG TTTTCCTGCTTGGGT CD0582 695634 - 698207 + | putative PEP-utilising kinase TERM 690 698301 - 698343 + T 100 -10.6 -4.77165 | opp_overlap 698301 TCATAATACTACTAA TACCCACCGAACAGCGGT AAGAAAA ACCGTAGCTTGGTGGGTA TTTTCTTATGCAAAA TERM 691 698343 - 698301 - T 72 -8.4 -3.29381 | opp_overlap 698301 TCATAATACTACTAA TACCCACCGAACAGCGGT AAGAAAA ACCGTAGCTTGGTGGGTA TTTTCTTATGCAAAA TERM 692 698374 - 698362 - T 85 -6.3 -5.47218 | TCTTATGCAAAAAAA TGAGA ATG TCTCA AAATAAAAATTTGAT CD0583 700054 - 698825 - | putative signaling protein TERM 693 699583 - 699593 + g 76 -2.6 -5.51353 | AAACTGCCTCAAAGT TAAT CTT ATTA TTTTTATTATTTTTA CD0584 701234 - 700056 - | putative signaling protein TERM 694 702202 - 702184 - H 73 -5.4 -4.8667 | TATACCTTACAAAAA CAATAAAT CTA ATTTATCG AAGAGGAAAAATATG TERM 695 702402 - 702416 + G 72 -6.4 -4.2558 | opp_overlap 702402 702401 TTATAGAGACAAAAG CTGGTT CTA GACCAG TTTTAATCCAGAGTA CD0585 702215 - 703690 + | GntR family transcriptional regulator CD0586 703975 - 704154 + | hypothetical protein TERM 696 704531 - 704572 + F 100 -14.3 -3.28765 | gap 1, opp_overlap 704525 704534, overlap 704534 ATAAAACAAGTTAAG TAATGGATATTTTCTAATTA TAA TAATT-GAAAATATCCATTA TTGCATTTAGAATAT TERM 697 704534 - 704569 + F 95 -11.6 -3.77832 | gap 1, opp_overlap 704525 704534, overlap 704531 AAACAAGTTAAGTAA TGGATATTTTCTAATTA TAA TAATT-GAAAATATCCA TTATTGCATTTAGAA TERM 698 704569 - 704534 - f 95 -11.6 -3.43651 | gap 1, opp_overlap 704534 704531, overlap 704525 AAACAAGTTAAGTAA TGGATATTTTCTAATTA TAA TAATT-GAAAATATCCA TTATTGCATTTAGAA CD0587 704792 - 705067 + | hypothetical protein CD0588 705087 - 705374 + | hypothetical protein TERM 699 705613 - 705565 - f 73 -8 -3.77607 | opp_overlap 705570 705573, overlap 705570 AATAAGCGCATTAAA TAAAATAACTGTGTTGGTA-AAGA TTA TATTATAC-AACACAGTTATTTTA ATAAACAAAGAAGAA CD0589 705775 - 708270 + | hypothetical protein CD0590 708285 - 713495 + | hypothetical protein TERM 700 713536 - 713570 + T 100 -9.4 -5.24531 | opp_overlap 713531 713536 713566 AAGAAATTTACAAAA GGGGATGTTTCAAAAT GAA AATTTGAATCATCTCC TTTTTTGTAAAAAAT TERM 701 713570 - 713536 - T 77 -7.2 -4.53707 | opp_overlap 713536, overlap 713531 713566 AAGAAATTTACAAAA GGGGATGTTTCAAAAT GAA AATTTGAATCATCTCC TTTTTTGTAAAAAAT CD0591 715819 - 713720 - | putative cation transporting ATPase CD0592 716257 - 715862 - | hypothetical protein CD0593 718091 - 717651 - | hypothetical protein CD0594 718446 - 719759 + | hypothetical protein CD0595 719777 - 720313 + | hypothetical protein TERM 702 720412 - 720433 + F 93 -5.2 -6.23317 | opp_overlap 720412 720415 TAAGTACAGAAAAAA GAGTAGGA AAATTA TCCTATTC TTTTTTTATTTTTAT CD0596 720829 - 721050 + | hypothetical protein cotJB1 721050 - 721313 + | putative spore-coat protein TERM 703 721410 - 721394 - g 76 -5.1 -5.1675 | overlap 721396 GGATTTATCAAAAAA CACTGGA ACA TCCAGTT AACATAAGACAAGCA TERM 704 721408 - 721396 - g 79 -7.7 -4.2131 | overlap 721394 ATTTATCAAAAAACA CTGGA ACA TCCAG TTAACATAAGACAAG cotJC1 721375 - 721947 + | putative spore-coat protein TERM 705 722330 - 722368 + T 70 -2.7 -5.5604 | AATAAACTATCAAAA TAAGAGGTAAAAG TTTTAGTTGATTT CTTTTATCTCTTA TTTTTTATTGATTAA CD0599 722775 - 722539 - | transcriptional regulator (partial) CD0600 723174 - 722824 - | hypothetical protein TERM 706 723075 - 723085 + g 72 -5.4 -4.82162 | opp_overlap 723075 TAAAATGATAAATAG CGAA TTG TTCG TTTTCTGTTATTCTA ogt1 723491 - 724024 + | methylated-DNA--protein-cysteine methyltransferase 1 TERM 707 724819 - 724858 + T 79 -3.6 -5.68489 | opp_overlap 724804 724819 TTATATTATAGAATA TAAGGGAGATACACAACT TTTT AGTGTTCAATCTCCCTTA TTTTTTATTATTATA CD0602 725285 - 725037 - | putative plasmid-related protein CD0603 725359 - 725673 + | hypothetical protein CD0604 726099 - 726512 + | hypothetical protein CD0605 726570 - 726938 + | hypothetical protein TERM 708 728045 - 728031 - gf 72 -8.6 -3.01912 | opp_overlap 728022, overlap 728015 CTATATGTAGAGATA GGATAG AAC CTATCC AATACTACTTGAATT tlpB' 728498 - 728608 + | putative transposase-like protein B TERM 709 728635 - 728621 - gT 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG CD0606 727281 - 729637 + | chloride ion channel protein TERM 710 730066 - 730097 + T 70 -3.1 -5.3671 | opp_overlap 730064 GAGTGGCTATGAATA CAGTGTGTATT GCAAGAAAAA GGTACACACTG TTTTTTCGTTCTGTT TERM 711 730242 - 730265 + T 73 -8.8 -2.79131 | opp_overlap 730240, overlap 730241 730263 CATAATGAATTGAGA GCGCAAGTGG TTAC CCTTTTGCGC CTTTGACGTCATTTT CD0608 730920 - 730315 - | hypothetical protein TERM 712 731234 - 731222 - H 74 -4.9 -5.13354 | TTGATAAAAAATAAA GTTAA ATA TTAAC TAAGTAAATTTGAAA CD0609 731290 - 731859 + | hypothetical protein CD0610 733532 - 732195 - | two-component sensor histidine kinase CD0611 734637 - 733927 - | two-component response regulator CD0612 737132 - 735021 - | putative ABC transporter, permease protein CD0613 737883 - 737122 - | ABC transporter, ATP-binding protein TERM 713 739100 - 739084 - R 77 -5.2 -5.31072 | ACAATATAATAAAAA TCCTAT AATAA ATAGGA CTCTGTAATATAATA TERM 714 739185 - 739171 - R 81 -5.8 -5.29716 | GTAATATAATAAAAA TACTAT AAT ATAGTA AAAATCATGCAATAA CD0614 739416 - 739240 - | hypothetical protein CD0615 740101 - 739520 - | TetR family transcriptional regulator TERM 715 739859 - 739871 + g 71 -4.9 -4.83269 | overlap 739867 TTCCCTTAATTGCTG TTTAG GTG CTAAA TTTTTAGTATCATGT TERM 716 740149 - 740136 - R 70 -2.5 -5.60993 | overlap 740137 740141 TTCTCCATAAAAAAA TTAAA CATG TTTAA TACACGTTTAGATAC TERM 717 740197 - 740222 + r 81 -10.7 -2.56761 | opp_overlap 740219 GATGTCAATGGGTGA TTAGTACTTAA GTAT TTAAGTACTAA TCGATTAGACTTTTA CD0616 741051 - 740227 - | MerR family transcriptional regulator TERM 718 740723 - 740739 + g 72 -6.7 -4.08689 | opp_overlap 740722 TCATCTTTATCACAG TTTATAG CTT CTATAAA TTTATCAATTTTATT CD0617 742122 - 741229 - | hypothetical protein TERM 719 741434 - 741416 - G 75 -4.6 -5.055 | TGAATGTTGAAAAAA TAGTACAT CAT ATGAACTA ACCCAGCTGATAAAA CD0618 742816 - 742379 - | putative transcriptional regulator TERM 720 742966 - 743005 + r 100 -16.2 -3.60805 | gap 1, opp_overlap 742966, overlap 742972 TAAAATTCAAAAAAA TACTATGGATATTTGGATA AAT TATCCAAATATCC-TAGTA TTTCACATAGAATAT TERM 721 743005 - 742966 - R 100 -16.2 -5.61824 | gap 1, opp_overlap 742966 742972 TAAAATTCAAAAAAA TACTATGGATATTTGGATA AAT TATCCAAATATCC-TAGTA TTTCACATAGAATAT TERM 722 742972 - 743000 + r 100 -16.3 -2.85297 | opp_overlap 742966, overlap 742966 TCAAAAAAATACTAT GGATATTTGGATA AAT TATCCAAATATCC TAGTATTTCACATAG CD0619 743222 - 743073 - | hypothetical protein CD0620 743465 - 743235 - | hypothetical protein CD0622 744504 - 744283 - | hypothetical protein CD0623 744929 - 745069 + | hypothetical protein CD0624 745084 - 745341 + | putative phage-related regulatory protein CD0625 745796 - 747049 + | putative phage-related regulatory protein CD0626 748113 - 749414 + | putative phage-related replicative helicase CD0627 749490 - 749765 + | putative phage positive regulator of late transcription TERM 723 751156 - 751188 + F 86 -5.7 -5.63517 | opp_overlap 751156 751155 ACACAAAAGAAAAGG CGATATGAAGCTA AACTTAA TGACTTCATATCG TTTTTTATTTGAAAC CD0627A 751318 - 751548 + | putative ferredoxin CD0628 751541 - 752122 + | hypothetical protein TERM 724 752595 - 752606 + T 73 -3 -5.64873 | opp_overlap 752587 752595, overlap 752587 TACTATATAAAAATA GATA TAAG TATC TTTTTTATTATTGAA CD0629 753373 - 752696 - | putative transcriptional regulator CD0630 754935 - 753562 - | putative drug/sodium antiporter TERM 725 755016 - 754969 - H 75 -8.3 -3.61267 | gap 1, opp_overlap 754963 754969, overlap 754963 754999 AAGTCTAAATTATAA TACTATAAATTATAGTAAGTAT GGAAA ATAGT-ACTATAATTTATAGTA TTTGTCAATAGTAAG TERM 726 754969 - 755016 + H 78 -8.3 -3.93695 | gap 1, opp_overlap 754963 754969 754999, overlap 754963 AAGTCTAAATTATAA TACTATAAATTATAGTAAGTAT GGAAA ATAGT-ACTATAATTTATAGTA TTTGTCAATAGTAAG CD0631 755054 - 755575 + | hypothetical protein CD0632 755707 - 755964 + | hypothetical protein CD0633 756182 - 757261 + | hypothetical protein CD0634 757585 - 757953 + | hypothetical protein CD0635 758061 - 758873 + | hypothetical protein CD0636 759258 - 760148 + | putative radical SAM superfamily protein TERM 727 760659 - 760649 - g 93 -5.4 -6.11392 | opp_overlap 760649 AAATAAATAAAAAAA GTCA GAT TGAC CTTTTGATATTAGCT CD0637 760612 - 761055 + | putative acetyltransferase CD0638 761197 - 761397 + | hypothetical protein TERM 728 762726 - 762704 - g 70 -5 -4.57581 | ATTTTAAAGAAGAAA TTTTTCAAGA AGG TATTGAAAAA GGTATCGAAAAAGGT CD0639 761770 - 762891 + | hypothetical protein TERM 729 763062 - 763028 - f 100 -10.2 -4.55697 | opp_overlap 763028 AGGTGTATAAATAAA GGAGATAATTCAAAAT AAA AGTTTGAACCATCTCC TTCTTATAGAAAAAC CD0640 763096 - 763584 + | hypothetical protein TERM 730 763650 - 763612 - f 100 -12.9 -5.10497 | opp_overlap 763612 AATTTATTCAAAAAA GTTATATATTTATAACA AGAGG TGTTATAAATACATAAC TTTTTAAGGGGGATT TERM 731 763612 - 763650 + F 100 -10.7 -4.57341 | opp_overlap 763612 AATTTATTCAAAAAA GTTATATATTTATAACA AGAGG TGTTATAAATACATAAC TTTTTAAGGGGGATT TERM 732 763905 - 763918 + G 85 -3.9 -5.72616 | GAGTTAATGATATTG CAATA AAAG TATTG TTTTTTTCTGTAGCT CD0641 763670 - 764077 + | hypothetical protein CD0642 764078 - 764296 + | putative transcriptional regulator TERM 733 765463 - 765436 - f 75 -7.3 -4.29656 | opp_overlap 765436 TATAAAATTGGAAAA TTAAAAACAAA TAAAAG TTTGTTTTTAA TTATTTAAAATCCAA TERM 734 765436 - 765463 + F 75 -8 -3.9392 | opp_overlap 765436 TATAAAATTGGAAAA TTAAAAACAAAT AAAA GTTTGTTTTTAA TTATTTAAAATCCAA TERM 735 765496 - 765531 + F 70 -3.5 -5.4251 | gap 1 TTGATTATTTTTAAA GAAACTATGTTCT-GT ATAAA ACTAGAATGTGGTTTC TTTTTTATGTATAAA TERM 736 766463 - 766453 - g 72 -2.6 -5.47218 | TGGTATGGAAAAAAA TAAT TAT ATTA AAACTCTTTGGGGAA CD0643 765815 - 766504 + | two-component response regulator TERM 737 766868 - 766855 - g 72 -5.3 -4.81249 | opp_overlap 766855 CTTCAAAGTCAAAAA GAAGA ATTA TCTTC TTCAATGAGAGCAAC TERM 738 766965 - 766955 - g 70 -5.4 -4.66953 | TTAATATGGCAAAAA TCCA ATC TGGA GATATGATATTAAAT CD0644 766504 - 767421 + | two-component sensor histidine kinase CD0645 767494 - 768420 + | putative lantibiotic ABC transporter,ATP-binding protein CD0646 768417 - 769097 + | putative lantibiotic ABC transporter, permease protein CD0647 769204 - 769530 + | hypothetical protein TERM 739 769611 - 769660 + F 72 -9 -2.53519 | opp_overlap 769621, overlap 769616 769649 TTAGTTATTCTTAGC TTGGACTATACTCACTATTTTA ACTATA TAAAATAGTGGATATAGTTTAA CTATCTCTTTATAAC TERM 740 769616 - 769655 + F 79 -8.9 -3.77209 | opp_overlap 769621, overlap 769611 769649 TATTCTTAGCTTGGA CTATACTCACTATTTTA ACTATA TAAAATAGTGGATATAG TTTAACTATCTCTTT TERM 741 769910 - 769890 - f 95 -7.1 -5.92399 | opp_overlap 769890, overlap 769905 TAAGAAAATAAAAAA TAAAAAATT TTA AATTTTTTA TTTATTGCGAAAAAA TERM 742 769890 - 769910 + F 73 -7.1 -4.15044 | opp_overlap 769890 769905 TAAGAAAATAAAAAA TAAAAAATT TTA AATTTTTTA TTTATTGCGAAAAAA CD0648 770505 - 771164 + | GntR family transcriptional regulator TERM 743 771462 - 771445 - f 95 -11.3 -3.59024 | overlap 771439 771437 TTACAAATATTACAA GGAAGCC AGAA GGCTTCC TAAAAAAATAACCTT TERM 744 771533 - 771485 - f 100 -16.8 -4.40572 | opp_overlap 771488 771492 771499 ATAACCTTTATAAAA TTTTTTATTTTAAATTTAAAAT TTTTT ATTTTAAATTTAAAATAAAAAA TGAAAGAGGTGGTAG TERM 745 771492 - 771505 + F 73 -2.5 -5.80951 | opp_overlap 771485, overlap 771488 771499 TTATAAAATTTTTTA TTTTA AATT TAAAA TTTTTTATTTTAAAT CD0649 771590 - 773599 + | putative peptidase TERM 746 773818 - 773808 - g 74 -5.4 -4.9138 | opp_overlap 773808 773798 ATGACTCAAACAAAA GATG TAA CATC ATTTAGTTGGATTTC TERM 747 774324 - 774312 - g 70 -6.3 -4.15396 | GGTGAAACCAAAGAA CTTGT ACC ACAAG GAAAGTACCAAATAA CD0650 773616 - 775571 + | putative peptidase CD0651 775587 - 776777 + | hypothetical protein TERM 748 776948 - 776932 - f 74 -8.1 -3.44051 | TTTTTAGCATTATAA TCTTGAT TTT ATCAAGA AACAGATTTTTTATT TERM 749 777208 - 777228 + F 76 -2.7 -5.95449 | opp_overlap 777211, overlap 777211 CTAGTTTGAGATAGC CAATTTTAA TTA TTAAAATTA TTTTTTGTTTTATTT TERM 750 777211 - 777225 + F 70 -4.4 -4.94109 | opp_overlap 777211, overlap 777208 GTTTGAGATAGCCAA TTTTAA TTA TTAAAA TTATTTTTTGTTTTA CD0652 777958 - 778332 + | GntR family transcriptional regulator TERM 751 778530 - 778518 - g 85 -4.9 -5.61881 | opp_overlap 778518 GTGGAAAAATAAAAA TCTTT GGT AAAGA TTTCGATGGAAATGA CD0653 778334 - 779191 + | ABC transporter, ATP-binding protein CD0654 779194 - 779832 + | putative ABC transporter, permease protein TERM 752 780272 - 780300 + F 70 -4.7 -4.90266 | gap 1, opp_overlap 780272 GGAAGTTAATAAAAA GAAGC-TGTCTC AAAATA GAGATAAGCTTC TTTTTCATTGCTGAA TERM 753 780655 - 780623 - f 86 -5.7 -5.67063 | opp_overlap 780624 780628, overlap 780628 GTTATTAGAAAAAAA TAAAAGTAATTGCAA AGC TTGCAATTACTTACT TCTATATTAATTACT TERM 754 780624 - 780654 + F 70 -7 -3.72909 | opp_overlap 780623 780628, overlap 780628 TTATTAGAAAAAAAT AAAAGTAATTGCAA AGC TTGCAATTACTTAC TTCTATATTAATTAC TERM 755 780650 - 780628 - f 100 -12.2 -5.61277 | opp_overlap 780624 780628, overlap 780623 TAGAAAAAAATAAAA GTAATTGCAA AGC TTGCAATTAC TTACTTCTATATTAA TERM 756 780628 - 780650 + F 95 -12.2 -3.54503 | opp_overlap 780628 780623, overlap 780624 TAGAAAAAAATAAAA GTAATTGCAA AGC TTGCAATTAC TTACTTCTATATTAA CD0655 780838 - 781572 + | metallo-beta-lactamase superfamily protein TERM 757 782183 - 782173 - f 76 -2.6 -5.95286 | opp_overlap 782173 ATGAAAAATAAAAAA TTAT ATA ATAA TTATGGGAATGAGGT TERM 758 782270 - 782235 - f 91 -13.4 -2.74514 | opp_overlap 782235 CTAAACTGCCAATGA GCTGATGACTTCTATG ATAT CATAGATGCCACCAGC TTTTTTTGTTGTTTA TERM 759 782235 - 782270 + F 100 -9 -6.01369 | opp_overlap 782235 CTAAACTGCCAATGA GCTGATGACTTCTATG ATAT CATAGATGCCACCAGC TTTTTTTGTTGTTTA CD0656 782556 - 783776 + | putative chloride ion channel protein cdu2 783839 - 785032 + | putative Na(+)/H(+) antiporter cdu1 785233 - 785613 + | putative regulatory protein TERM 760 785655 - 785692 + F 100 -13.7 -5.84011 | ATAATTTTGGTTTTG TAAGCTCTGCAACTATT TTTA GATGGTTGCAGAGTTTA TTTTTATTTTTTATT TERM 761 786140 - 786166 + F 95 -11.2 -3.81414 | opp_overlap 786139 786138 ACTAAATTATAAAGT TTACATAATTAT TTA ATAATTATGTAA TTGTTACTTGAAAAT TERM 762 786695 - 786663 - g 80 -9.6 -3.22943 | opp_overlap 786666, overlap 786666 786680 GAGAAACAGATTTAA TAATATTTTTTATT GAATT AATAAAAAATATTA AATTAAGTAGCTTTT tcdD 786521 - 787075 + | putative transcriptional regulator TERM 763 789840 - 789813 - g 70 -6.5 -4.19414 | overlap 789803 AGAAATTAGAAATAA TTCTAATTCAA GTGATA TTGAACTAGAA GAAAAAGTAATGTTA tcdB 787393 - 794493 + | toxin B TERM 764 794600 - 794631 + F 73 -4.4 -5.24799 | opp_overlap 794600 ATTTACCAATAAAAA GGTGGACTATGATG AATG CACAGTAGTTCACC TTTTTATATTTCTAA tcdE 794615 - 795115 + | putative cell wall hydrolase protein TERM 765 796414 - 796393 - g 74 -3.1 -5.43414 | overlap 796395 ATGATAGACAAAAAA GGTTTATAA ATTA TTATAAATC TCAAATCAATAAACC TERM 766 796832 - 796815 - g 71 -2.1 -5.38249 | overlap 796817 ATGAAGTATAAAAAA TATATAA ATAA TTATACA TCAGAAAACTTTGAT TERM 767 798604 - 798594 - g 75 -4 -5.24799 | overlap 798598 GTAGAAACAGAAAAA GAAA TTT TTTC AAAATATAGCGAACA TERM 768 802116 - 802104 - g 73 -3.5 -5.22312 | ATTGATAGTAAAAAA TATTA CTT TAATA CTAACACTGCTGAAG TERM 769 802179 - 802167 - g 70 -3.5 -5.05782 | ATTGATGGTAAAAAA TATTA CTT TAATA CTAACACTGCTGAAG TERM 770 802242 - 802230 - g 70 -3.5 -5.05782 | ATTGATGGTAAAAAA TATTA CTT TAATA CTAACACTGCTATAG TERM 771 802986 - 802974 - g 70 -3.5 -5.05782 | ATTGATGGTAAAAAA TATTA CTT TAATA CTAACACTTTCATAG TERM 772 803262 - 803250 - g 70 -3.5 -5.05782 | ATTGATGGTAAAAAA TATTA CTT TAATA CTAACACTGCTGTTG tcdA 795843 - 803975 + | toxin A TERM 773 804043 - 804091 + T 100 -15.1 -5.06585 | opp_overlap 804049 804055, overlap 804044 ATAATAAATATTGAG ATTTAATTAAAAGTCATGTGTTA TTG TAATACATGACTTTTAGTTAAAA TTTTTCTATCATTTA TERM 774 804044 - 804090 + T 100 -18.6 -3.62324 | opp_overlap 804049 804055, overlap 804043 TAATAAATATTGAGA TTTAATTAAAAGTCATGTGTTA TTG TAATACATGACTTTTAGTTAAA ATTTTTCTATCATTT TERM 775 804085 - 804049 - T 80 -9.7 -3.14294 | opp_overlap 804044 804043, overlap 804055 AATATTGAGATTTAA TTAAAAGTCATGTGTTA TTG TAATACATGACTTTTAG TTAAAATTTTTCTAT TERM 776 804079 - 804055 - T 86 -8.7 -4.44548 | opp_overlap 804044 804043, overlap 804049 GAGATTTAATTAAAA GTCATGTGTTA TTG TAATACATGAC TTTTAGTTAAAATTT dtxA 805008 - 804310 - | hypothetical protein TERM 777 805360 - 805350 - H 70 -2.6 -5.60689 | overlap 805357 TGATATAATAAAAAA TTAA ATA TTAA ATATTAACTATAATA cdd1 805434 - 805679 + | hypothetical protein TERM 778 805707 - 805750 + T 70 -4 -5.1861 | opp_overlap 805707 GTTAGACATAAAAAA GAGTTGAATATCCGTTTTAA ATAA TAAAAACTAATACTCAACTC TTTTTTAGTCGTAAA TERM 779 805750 - 805707 - T 100 -8.4 -5.4251 | opp_overlap 805707 GTTAGACATAAAAAA GAGTTGAATATCCGTTTTAA ATAA TAAAAACTAATACTCAACTC TTTTTTAGTCGTAAA CD0664B 806166 - 805897 - | hypothetical protein cdd2 807781 - 807044 - | putative lantibiotic ABC transporter, permease protein cdd3 808554 - 807793 - | putative lantibiotic ABC transporter, peremase protein cdd4 809477 - 808554 - | putative lantibiotic ABC transporter,ATP-binding protein TERM 780 809688 - 809664 - g 95 -7.2 -5.9362 | opp_overlap 809664 809663, overlap 809666 TAAAAGATAAAAAAA TACTTGTGGT TGATG ACCACAAGGA ATTATTAAAAATGAT TERM 781 809686 - 809666 - g 100 -9.8 -4.5577 | opp_overlap 809664 809663, overlap 809664 AAAGATAAAAAAATA CTTGTGGT TGATG ACCACAAG GAATTATTAAAAATG CD0668 809633 - 810346 + | two-component response regulator TERM 782 810430 - 810442 + G 70 -6.3 -4.10085 | AGGCGATTTATAGGT TCAAG TAT CTTGA TTTCATTACTTTTTA TERM 783 811549 - 811565 + G 72 -4.5 -4.85129 | AATATAAGGGTTACC TCTAAGT CTG ATTTAGA TTTTTGCTATATAAT CD0669 810391 - 811797 + | two-component sensor histidine kinase TERM 784 811830 - 811860 + F 71 -6.4 -4.1673 | opp_overlap 811830 811839, overlap 811833 ACAGATAAGAATGAA GAATGAAAATATTT TGA AAATAATTTTATTC TTTATTGACAAATTA TERM 785 812109 - 812094 - f 73 -2.6 -5.64274 | TTATTGACAAAAAAA TTCTAC TAAA ATAGAA TTATGGTATAGTGTT TERM 786 812438 - 812426 - f 80 -2.7 -6.04953 | overlap 812427 ATATAAATAAAAAAA CTCTA AAA TAGAA GGATATAATTATATA CD0670 813559 - 813948 + | putative regulatory protein TERM 787 814125 - 814157 + F 71 -5.8 -4.66163 | gap 1, opp_overlap 814125 AATTAAATTTAAAAA GCTACCTTTACTTAT AAGT ATAATTAA-GGTAGC TTTTTAAATAGAGGT TERM 788 814157 - 814125 - f 73 -5.8 -4.83759 | gap 1, opp_overlap 814125 AATTAAATTTAAAAA GCTACCTTTACTTAT AAGT ATAATTAA-GGTAGC TTTTTAAATAGAGGT CD0671 814883 - 815353 + | putative glyoxalase CD0672 815706 - 816491 + | hypothetical protein TERM 789 816512 - 816548 + F 100 -15.6 -5.54264 | opp_overlap 816512 ATTAAACAATAAAAA TAAACAGTTAGTAAAA ATTTA TTTTACTAACTGTTTA TTTTTTTACCTATTT TERM 790 816548 - 816512 - f 100 -15.6 -5.39905 | opp_overlap 816512 ATTAAACAATAAAAA TAAACAGTTAGTAAAA ATTTA TTTTACTAACTGTTTA TTTTTTTACCTATTT CD0673 817366 - 818073 + | hypothetical protein TERM 791 818228 - 818259 + F 76 -3 -5.86609 | TTTTTAGATTATTTA TACCCAATCGAGTT GCTT AGGTCAGTTGGGTA TTTTTATTTTTTTAA CD0674 818253 - 818468 + | hypothetical protein CD0675 818784 - 819185 + | putative acetyltransferase CD0676 820172 - 819393 - | hypothetical protein CD0677 820648 - 820169 - | putative RNA polymerase sigma factor CD0678 821243 - 821449 + | putative transcriptional regulator CD0679 821646 - 822653 + | hypothetical protein CD0680 822691 - 824118 + | hypothetical protein TERM 792 824751 - 824763 + G 71 -4.9 -4.72272 | TTAACTGCTTTATTT TCATT AGC AATGA TTTTTGGTGGGAAAG TERM 793 825186 - 825172 - g 72 -4.3 -5.08088 | AATTTGGAAGAAAAA TACCT TTTAT AGGTA TGGCATTAGCAGCAG CD0681 824262 - 825527 + | transporter CD0682 825569 - 827167 + | putative sodium:solute symporter TERM 794 827605 - 827583 - g 73 -9.2 -2.72463 | opp_overlap 827573 827571, overlap 827586 ATTCAGTTTCAAGTA GAAGCTGTGA TTA TTACAGCTTC GGCCATGAATAAGGT CD0683 827202 - 828224 + | LacI family transcriptional regulator TERM 795 828721 - 828693 - T 83 -6.1 -5.29445 | gap 1, opp_overlap 828693 828708 CTTTAACAATAAAAA GAGGCTTATCTC TATTTT GAGACA-GCCTC AAATTTTTAAAACTA CD0684 830142 - 828739 - | putative ATP-dependent peptidase TERM 796 831173 - 831193 + H 100 -11.9 -5.54907 | TTGGTAACTTATATT GCGGATGAT TAC GTCATCCGC TTTTTATTTTATAAA infC 831229 - 831738 + | translation initiation factor IF-3 rpmI 831766 - 831960 + | 50S ribosomal protein L35 rplT 832016 - 832372 + | 50S ribosomal protein L20 TERM 797 832394 - 832423 + F 100 -9.5 -6.04324 | opp_overlap 832394 ATCATGAGATGTAAA GTCTTTGAGTTAT GTAA ATAATTCAAGGAC TTTTTTATTTTTTGA TERM 798 832623 - 832647 + F 90 -10.3 -3.46144 | opp_overlap 832626 832638, overlap 832626 CAATCAATCTTGAAT TAATATTATCA ACA TGATAATATTA TCTTATTAATAATAT TERM 799 832644 - 832626 - f 70 -7.6 -3.35867 | opp_overlap 832626 832623, overlap 832638 TCAATCTTGAATTAA TATTATCA ACA TGATAATA TTATCTTATTAATAA TERM 800 832626 - 832644 + F 75 -7.6 -3.85505 | opp_overlap 832626 832638, overlap 832623 TCAATCTTGAATTAA TATTATCA ACA TGATAATA TTATCTTATTAATAA CD0688 832696 - 833226 + | hypothetical protein TERM 801 833378 - 833422 + F 83 -3.8 -5.88061 | ATTTTCTAAATAGAA CTTCCTTGTACTATTT CTTTAATAACTCT GAGTGGTACAAGGAAG TTTTTTTAATTTTTT CD0689 833702 - 835627 + | putative nucleotide phosphodiesterase TERM 802 835892 - 835935 + F 100 -12.2 -4.371 | gap 1, opp_overlap 835895 AGTAAAAAATATTGA GAACTATATGTAGATTTGCTT AAA AAG-GAATTTACATATAGTTC TTTTCGTATAATAAA CD0690 836028 - 837932 + | putative nucleotide phosphodiesterase CD0691 838776 - 839555 + | putative short chain dehydrogenase TERM 803 839643 - 839667 + T 82 -10.1 -3.00259 | opp_overlap 839643 ATAATTGTGGCAAAA CGGCTTATC TAGTGAC GATAAGCCG TCTATAATGTATATA TERM 804 839667 - 839643 - T 93 -10.1 -4.10007 | opp_overlap 839643 ATAATTGTGGCAAAA CGGCTTATC TAGTGAC GATAAGCCG TCTATAATGTATATA CD0692 840686 - 839865 - | hypothetical protein TERM 805 840865 - 840889 + r 83 -6.5 -5.22006 | opp_overlap 840861 840865 840868 TGTATATGAACTGAA TGACTTATTCA ATA TGGATAAGACA TTTTTCTTGTAATAA TERM 806 841056 - 841100 + r 75 -6.7 -4.43307 | opp_overlap 841061, overlap 841061 TGTCTAAAGAAAGTT AAAAAGAGTAGAGCACAAA GGAATTA TTTGTACTTTACTCTTTTA TTGTTTTGTTAAAAA TERM 807 841095 - 841061 - R 78 -6.6 -4.88295 | opp_overlap 841061 841056 AAAGAAAGTTAAAAA GAGTAGAGCACAAA GGAATTA TTTGTACTTTACTC TTTTATTGTTTTGTT TERM 808 841061 - 841095 + r 83 -6.6 -5.14949 | opp_overlap 841061, overlap 841056 AAAGAAAGTTAAAAA GAGTAGAGCACAAA GGAATTA TTTGTACTTTACTC TTTTATTGTTTTGTT TERM 809 841131 - 841118 - R 72 -3.9 -5.40072 | opp_overlap 841118 GTTTTGTTAAAAAAA CTAAT TTAT ATTAG TGATTAAAATATATT CD0693 842447 - 841629 - | MerR family transcriptional regulator TERM 810 842138 - 842150 + g 81 -4.9 -5.4492 | TTTTAATAGTGGTTT CTATT TTT AATAG TTTTTTCTGTGTATC CD0694 842615 - 843196 + | TetR family transcriptional regulator TERM 811 843395 - 843385 - T 73 -2.6 -5.77988 | opp_overlap 843385, overlap 843388 843391 843393 ATATATATAAAAAAA TAAT AAT ATTA TTAATAAATAAAGTA TERM 812 843455 - 843404 - T 100 -17.8 -4.28713 | opp_overlap 843408, overlap 843393 843408 AATATTATTAATAAA TAAAGTATCAGAAATTATAAAGAC AAGA GTCTTAAAAATTTCTGATACTTTA CCATATAATTTTATT TERM 813 843451 - 843408 - T 100 -14.2 -4.70887 | opp_overlap 843408, overlap 843404 TTATTAATAAATAAA GTATCAGAAATTATAAAGAC AAGA GTCTTAAAAATTTCTGATAC TTTACCATATAATTT TERM 814 843408 - 843451 + T 100 -14.2 -3.65714 | opp_overlap 843408 843404 TTATTAATAAATAAA GTATCAGAAATTATAAAGAC AAGA GTCTTAAAAATTTCTGATAC TTTACCATATAATTT CD0695 845293 - 843551 - | putative exported peptidase TERM 815 845685 - 845673 - H 72 -4.9 -4.94811 | CTAAAAATAAACAAA TTAAG GGT CTTAA CAGTAGTGATTTTAT TERM 816 845796 - 845820 + G 90 -10.1 -3.95324 | AATGGTATCTGGGTT TGCTGCGATTA TTG TAATCGGAGCA TTGTTGTTAACACTC TERM 817 846106 - 846122 + G 70 -8.1 -3.14124 | overlap 846105 846117 GCTGATTTATCGGGA CTTGTAA GAC TTACAAG ATTTGTATTAATAAT CD0696 845722 - 847098 + | cation transport protein TERM 818 847520 - 847538 + G 70 -8.2 -3.21099 | opp_overlap 847522 TCTGACAAGGTAACC CATTCACT TAT AGTGGATG TTACTGATGAGCAAG CD0697 847385 - 848056 + | putative cation transport protein TERM 819 848096 - 848131 + F 100 -13 -5.52384 | opp_overlap 848096 848091 848098 TGCAATGAAAGTAGA TAGTATCATATAATTA TGAA TAGTTATATGATACTA TTTTTTTAATCGAAG TERM 820 848131 - 848096 - f 85 -10.8 -3.06399 | opp_overlap 848096, overlap 848091 848098 TGCAATGAAAGTAGA TAGTATCATATAATTA TGAA TAGTTATATGATACTA TTTTTTTAATCGAAG TERM 821 848129 - 848098 - f 74 -9 -3.08298 | opp_overlap 848096, overlap 848096 848091 CAATGAAAGTAGATA GTATCATATAATTA TGAA TAGTTATATGATAC TATTTTTTTAATCGA CD0698 848362 - 849042 + | putative RNA methylase TERM 822 849139 - 849125 - f 73 -4.4 -5.25893 | opp_overlap 849125 849138 ATATATATTAAAAAA TAATTA AAT TAATTA TATATTAGATGTATA TERM 823 849349 - 849335 - f 76 -4.4 -5.40625 | opp_overlap 849335 ATATTATATAAAAAA TAATTA AAT TAATTA TGTATTGGATATATA TERM 824 849427 - 849415 - f 70 -4.9 -4.77698 | TAATACTAAAATAAA CAATA TAA TATTG TAAATGCAATGAAAG TERM 825 849646 - 849676 + F 88 -6.9 -5.60993 | gap 1 TACCGCGAAACTATA GCCTTTCG-TCCCT AGAC AGGGATTGAGGGGC TTTTTTTATACAAAA pheS 849702 - 850730 + | phenylalanyl-tRNA synthetase alpha chain TERM 826 850924 - 850909 - g 70 -4 -4.99645 | ATTTTAGAAATAAAA CAACAT CCAA ATGCTG ATAAGTTGGTTGTAA TERM 827 852012 - 851980 - g 77 -4.9 -5.1925 | opp_overlap 851982, overlap 851982 852006 852007 CCAGAACCTAAAAAA TTGGTAGTAAATCCT CAA AGAATTAACCACCTA TTAGGTGTAGATGTA pheT 850747 - 853140 + | phenylalanyl-tRNA synthetase subunit beta CD0701 853165 - 853755 + | hypothetical protein TERM 828 853768 - 853792 + F 75 -7.2 -4.30909 | TAAACTAAAAGATTT GCTGTCTC TTGTTTTTT GAGACAGC TTCTTTTAATGTATA TERM 829 854685 - 854673 - g 71 -4.9 -4.82901 | CTTTTTTTACAAAAA TTTTC GTG GAAAA ATCAATACTAATATG CD0702 854087 - 854770 + | hypothetical protein TERM 830 857439 - 857423 - g 70 -6.5 -4.14725 | TAGTGAAAGTATAAA CCACTTC AAA GAAGAGG GAGCAAGTACAGTTT CD0703 855339 - 857939 + | protease TERM 831 858298 - 858285 - g 89 -6.7 -5.42198 | GCTTAAAAAAGAAAA CTTCG GTGA CGAAG AAATGTATAGAGCAA CD0704 858043 - 858621 + | putative phosphohydrolase CD0705 858656 - 859132 + | putative DNA repair protein TERM 832 859314 - 859339 + F 79 -4.8 -5.60864 | opp_overlap 859313 GTAGTTGGGAAAAGG GGCTATCT CAGTGCATAA AGATAGCC TTTTTTTAGTCTGTC TERM 833 860143 - 860126 - g 77 -5.7 -4.87665 | TTCTATCTATAAAAA TACATTT AAGA AAATGTA CAAAAGATACAAAGA CD0706 859650 - 860471 + | putative reductase TERM 834 861573 - 861552 - g 86 -7.5 -5.1104 | AAAGAGACAGAAAAA TTAAAAGTA GGAG TACTTTTAA ACAAACCACCATTTC CD0707 860694 - 863207 + | putative signaling protein TERM 835 863296 - 863255 - T 100 -13.4 -3.62011 | opp_overlap 863255 863259, overlap 863259 ATATTTAAATTACAA TAAAGCCTAATGATACAT GTTATT ATCTATCATTAGGCTTTA TTTCTATAAGTTAAT TERM 836 863255 - 863296 + T 100 -14.1 -4.09509 | opp_overlap 863255 863259, overlap 863259 ATATTTAAATTACAA TAAAGCCTAATGATACATG TTAT TATCTATCATTAGGCTTTA TTTCTATAAGTTAAT TERM 837 863292 - 863259 - T 100 -9.8 -4.4281 | opp_overlap 863255 863259, overlap 863255 TTAAATTACAATAAA GCCTAATGATACAT GTTATT ATCTATCATTAGGC TTTATTTCTATAAGT TERM 838 863259 - 863292 + T 100 -10.5 -4.63044 | opp_overlap 863259 863255, overlap 863255 TTAAATTACAATAAA GCCTAATGATACATG TTAT TATCTATCATTAGGC TTTATTTCTATAAGT pepD 864862 - 863411 - | putative aminoacyl-histidine dipeptidase TERM 839 864948 - 864926 - H 71 -5.7 -4.73092 | opp_overlap 864926 ATAAGCTAAAATAAA CTCCTTTAA AAATA TTAAAGAAG ATTTTTTAACAGATT TERM 840 866110 - 866098 - g 78 -3.4 -5.56264 | overlap 866105 866107 TTTAAACATAAAAAA TGGA AGACA TCCA CTGCTGGATAAAAAG CD0709 865181 - 867559 + | putative DNA mismatch repair protein TERM 841 867906 - 867919 + G 73 -8.1 -3.40566 | opp_overlap 867906 GAAGCAATACTAAAA GAGGG TAGC CCCTC TTGTGGATGTAGTCT TERM 842 867919 - 867906 - g 85 -8.1 -4.46404 | opp_overlap 867906 GAAGCAATACTAAAA GAGGG TAGC CCCTC TTGTGGATGTAGTCT CD0710 867627 - 868040 + | hypothetical protein TERM 843 869923 - 869913 - g 74 -5.4 -5.00196 | opp_overlap 869913 TTGGAAATAAGAAAA GCAA GAC TTGC ATTAGTTTTAGCAAC argS 868299 - 869999 + | arginyl-tRNA synthetase CD0712 870253 - 871176 + | hypothetical protein CD0713 871523 - 873277 + | putative adenosylcobamide-dependent radical SAM superfamily protein CD0714 873295 - 874437 + | hypothetical protein TERM 844 874476 - 874504 + F 83 -6.1 -5.36441 | gap 1, opp_overlap 874493 TTTTATTGGTTAAGT GGGGCT-ATCTC AAAATA GAGATAAGCCTC TTTTTTGTATGAAGA CD0714A 874523 - 874654 + | sugar O-acetyltransferase (partial) CD0715 874770 - 875681 + | putative phosphate butyryltransferase TERM 845 875824 - 875772 - f 100 -11.9 -5.36441 | gap 1, opp_overlap 875775 GTTTTATATAAAAAA TAATTATAGCTTCAAAT-GAATAT ATACAA ATGTTCAATTTGAAGCTATAATTA ATATTAAAGTAGGAA TERM 846 875775 - 875821 + F 93 -11.4 -3.37245 | gap 1, opp_overlap 875772 TTATATAAAAAATAA TTATAGCTTCAAA-TGAATAT ATACAA ATGTTCAATTTGAAGCTATAA TTAATATTAAAGTAG cooS 876288 - 878207 + | putative bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase cooC 878517 - 879296 + | putative carbon monoxide dehydrogenase accessory protein fhs 879545 - 881221 + | formate--tetrahydrofolate ligase TERM 847 881275 - 881295 + F 78 -7.7 -4.29396 | opp_overlap 881265 881275 AAATAGTTCGTAAAA TATCTCGAA CAA TTTGAGATA TTTTCCTACATCCTT fchA 881326 - 881958 + | methenyltetrahydrofolate cyclohydrolase TERM 848 882482 - 882471 - g 71 -5.8 -4.42788 | TGGAAGGGGATAAAA GTGG ATTT CCAC CATGTACACCTACAG folD 882050 - 882922 + | FolD bifunctional protein CD0721 882959 - 883633 + | hypothetical protein CD0722 883669 - 884550 + | putative methylenetetrahydrofolate reductase CD0723 884594 - 885979 + | putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex, dihydrolipoyl dehydrogenase subunit CD0724 886035 - 886805 + | putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex,nickel-inserting subunit CD0725 886825 - 887769 + | acetyl-CoA decarbonylase/synthase complex subunit delta CD0726 887800 - 889167 + | acetyl-CoA decarbonylase/synthase complex subunit gamma CD0727 889217 - 890023 + | putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex,methyltransferase subunit TERM 849 891508 - 891525 + G 73 -8.5 -3.50639 | overlap 891507 GCTTCATTAGTTGAT GAAAGTG TTGA CACTTTC TATTCTTGTAACTTA CD0728 890080 - 892206 + | bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta gcvH 892293 - 892670 + | putative glycine cleavage system H protein TERM 850 892699 - 892746 + F 100 -15.2 -4.53163 | opp_overlap 892704 TATTATTATAATTGG GGAAAGTATAGTAAAATTTGAG TGCA CGCAAATTTAGCTATACTTTCC TTTTATCATATATAG TERM 851 893991 - 894001 + G 72 -6.8 -4.11216 | AGCTGTGCATGTTCA GCAG GAC CTGC TTTTGAAGGTGGAGG CD0730 892782 - 894710 + | putative iron-sulfur protein CD0731 894735 - 895607 + | putative radical SAM superfamily protein CD0732 895604 - 896542 + | putative radical SAM superfamily protein CD0733 896589 - 897404 + | putative biotin/lipoate-protein ligase TERM 852 897477 - 897511 + F 76 -2.3 -5.85011 | gap 1, overlap 897466 AACTGAAATCATGAA GGTTTCTTTGGTGTAT TGAA ATAC-CTAAGGGAATC TTTTTTTGATTTTTA CD0734 897554 - 897745 + | hypothetical protein TERM 853 897975 - 897959 - g 70 -3.7 -5.1101 | GTATCAGCTAAAAAA GCAAATA TAA TAGTTGC ACCTATTTCTGTAAT CD0735 897764 - 898180 + | hypothetical protein TERM 854 898338 - 898291 - g 91 -11.4 -3.15078 | overlap 898289 TATATGTCATGAACA TCCACATGACCATGCTCACGAC CACG ACCACGAACATAGTCATGAGGA ATCATCAGAGTCTAA CD0736 898196 - 898546 + | hypothetical protein TERM 855 898557 - 898581 + F 90 -7.3 -5.32599 | opp_overlap 898557 898553 898548 TGTAAATATAATTAA TCGCTTATA CGTTTGA TATAAGCGA TTTTTATATTTTGTG TERM 856 898581 - 898557 - f 72 -8 -3.58428 | opp_overlap 898557, overlap 898553 898548 TGTAAATATAATTAA TCGCTTATAC GTTTG ATATAAGCGA TTTTTATATTTTGTG hisK 899092 - 899871 + | histidinol-phosphatase TERM 857 899883 - 899933 + T 100 -14.5 -2.74645 | opp_overlap 899888, overlap 899888 TTAGATATATTCACA CAAAAGACTGTAGATAAGTTTGT ATAAA ATAAATTTATGTACAGTCTTTTG TAAATTTATATGATT TERM 858 899888 - 899928 + T 82 -8.6 -4.52803 | opp_overlap 899888, overlap 899883 TATATTCACACAAAA GACTGTAGATAAGTTTGT ATAAA ATAAATTTATGTACAGTC TTTTGTAAATTTATA CD0738 901065 - 900184 - | hypothetical protein TERM 859 900447 - 900461 + g 83 -2.2 -5.86609 | TATATATATTTTTAT TATTTT TAA AAGATA TTTTTCTTTTTTTCC TERM 860 900571 - 900588 + g 76 -6.3 -4.52897 | TTTTTCTACATCTTT GGTGCTA AATT TAGCATC TTTATTATTCATTAT TERM 861 901514 - 901456 - H 77 -8.8 -3.44377 | gap 2, opp_overlap 901457 901458, overlap 901464 901486 ATAGATAAAATCTAA TTATTTAACTTCAACTATTCCTCAAAAA AGCAA CTTTTAAGGAATAGTTGAAGC-AAA-AA GTTTGGTTACATAAT TERM 862 901508 - 901464 - H 100 -17.6 -3.13908 | opp_overlap 901458 901457, overlap 901456 901486 AATCTAATTATTTAA CTTCAACTATTCCTCAAAAA AGCAA CTTTTAAGGAATAGTTGAAG CAAAAAGTTTGGTTA CD0739 901618 - 902130 + | hypothetical protein TERM 863 902418 - 902446 + T 90 -10.4 -3.29829 | opp_overlap 902417 902409 902408 AAAGACTTGAAGTAG GGGTGAACTTTA CATAT TATAGTTCACCC TTATACAAAAATATA CD0740 903643 - 902546 - | putative aminotransferase TERM 864 903187 - 903222 + g 84 -9.1 -3.72576 | TCTTAGCAAGTTTTC CTAGTTCAGGGACGG GATTTA TCATTCCTGAACTAG TTTCATGGAACACCA TERM 865 903911 - 903898 - H 86 -3.9 -6.04324 | TCAAAAAATAAAAAA GAATT TATT AATTC TGAAAATAAAGGGGG glpK1 903936 - 905462 + | glycerol kinase CD0742 905503 - 906618 + | putative ethanolamine transporter TERM 866 906819 - 906855 + T 71 -5.4 -4.67942 | gap 1, opp_overlap 906823 906824, overlap 906824 AGTATAGTTTAGACA TAAATGGAGCTAAATAA ATAA TTATTTGGCTCC-TTAA TTTTAATTTATTACA TERM 867 906852 - 906823 - T 71 -6.5 -4.13246 | opp_overlap 906819 906824, overlap 906824 TAGTTTAGACATAAA TGGAGCTAAATAA ATAA TTATTTGGCTCCT TAATTTTAATTTATT TERM 868 906824 - 906851 + T 95 -12.2 -3.79902 | opp_overlap 906823 906824, overlap 906819 AGTTTAGACATAAAT GGAGCTAAATAA ATAA TTATTTGGCTCC TTAATTTTAATTTAT TERM 869 906851 - 906824 - T 82 -10 -3.07466 | opp_overlap 906824 906819, overlap 906823 AGTTTAGACATAAAT GGAGCTAAATAA ATAA TTATTTGGCTCC TTAATTTTAATTTAT CD0743 907663 - 906899 - | DeoR family transcriptional regulator TERM 870 908022 - 908044 + H 80 -6.4 -4.95758 | CCGCCAATTATTAAA GGCTATTTTT ATT AAAGATAGTC TTTTTATAATGTCAT TERM 871 908316 - 908281 - g 74 -7.2 -3.90097 | gap 1 AGTCTATAAAGATAA TGTTATTA-GCTTTTAA AAA TAAAAAGCCTAATAACA TAGAAAATATAATCT CD0744 908100 - 908888 + | putative chemotaxis protein CD0745 908903 - 909649 + | putative chemotaxis protein CD0746 909825 - 910199 + | hypothetical protein CD0747 910291 - 911751 + | putative lipoprotein CD0748 911798 - 914833 + | putative signaling protein TERM 872 914992 - 915016 + G 89 -12.1 -2.73364 | opp_overlap 914990 TTGAGCATATAGATG GGCCTTGCATG ATA CTTGCAGGGCC TGGTTCAGGTAAGAC TERM 873 915404 - 915392 - g 72 -4.9 -4.88067 | ACTTATGGATAAAAA TGAAT TTA ATTCA GAAGTATTAACAAAA CD0749 914910 - 916976 + | putative ATP-dependent DNA helicase TERM 874 917561 - 917586 + F 100 -12.7 -5.37593 | opp_overlap 917559 ACGCGGATATAATTC GTCTCTTAGCT GTAA AGCTAAGGGAC TTTTTTGATTTAAAA TERM 875 917694 - 917721 + F 100 -10.7 -5.64274 | TAACGCGGTAAAGTC GTCTCTTAGTC ATTAAA GACTGAGAGAC TTTTTTTGTAACTCG CD0750 917795 - 918610 + | amino acid ABC transporter, substrate-binding protein CD0751 918638 - 919315 + | amino acid ABC transporter, permease protein CD0752 919374 - 920096 + | amino acid ABC transporter, ATP-binding protein TERM 876 920091 - 920073 - f 70 -4.6 -5.02606 | opp_overlap 920073 920077 920080, overlap 920077 CATGAAAGAACAAAA GCATTTTT AGC AAAAGTGC TATAATTATATAAAA TERM 877 920140 - 920108 - f 72 -5.2 -5.05079 | gap 2, opp_overlap 920108 ATAATTATATAAAAA GGATGTTATTGATATT AGA AAT-TCAATA-CATCC TTTTTTAGTGATGGT TERM 878 920108 - 920140 + F 74 -5.2 -5.19212 | gap 2, opp_overlap 920108 ATAATTATATAAAAA GGATGTTATTGATATT AGA AAT-TCAATA-CATCC TTTTTTAGTGATGGT TERM 879 920227 - 920243 + F 72 -3.7 -5.40072 | opp_overlap 920227 TTGCAGAAAAAAAAA GAGCT CGGGGTA AGCTC TTTTTTTCCACCGAA TERM 880 920243 - 920227 - f 90 -4.4 -6.22802 | opp_overlap 920227 TTGCAGAAAAAAAAA GAGCTC GGGGT AAGCTC TTTTTTTCCACCGAA TERM 881 920529 - 920549 + F 70 -4.9 -4.8667 | opp_overlap 920480 920479, overlap 920480 920509 TATATTATTTTATCA TATATTGTA TTT TATAATATA TTTTTGTAGGGTATA TERM 882 921179 - 921163 - g 74 -9.5 -2.83346 | overlap 921160 921165 CGATAAAGTCAACTA CATGCTT AGT AAGCATG ATGCATGTTAACAAT iscS1 920745 - 921896 + | putative cysteine desulfurase thiI 921942 - 923117 + | putative thiamine biosynthesis protein CD0755 923273 - 924076 + | fimbrial protein (pilin) CD0756 924319 - 924960 + | putative reductase TERM 883 925079 - 925130 + F 100 -10.8 -5.54907 | gap 1, opp_overlap 925079 925087, overlap 925087 TCGTTGTAAAATAAT TAAATAAAGAATAAGGTGATAAGTA TTT TATTTATTATCTTATTCTTT-TTTA TTTTTGTTTTGTAGA TERM 884 925087 - 925123 + F 100 -10.5 -6.01725 | opp_overlap 925087 925079, overlap 925079 AAATAATTAAATAAA GAATAAGGTGATAAGTA TTT TATTTATTATCTTATTC TTTTTTATTTTTGTT TERM 885 925362 - 925314 - f 73 -2.8 -5.68489 | gap 1, opp_overlap 925330 TATAATAAGAAAAAA TAGAGAAAAAAAGTAACCCTT AGTTATAA AAGGGTT-CTTTTTTTTTATA ATAAAATAGCTATAA TERM 886 925903 - 925886 - f 86 -4.3 -5.95286 | ATTAAAAACAAAAAA TATTTAT ATAA ATAAATA TAAAAAATGATATAA CD0757 926372 - 928042 + | putative signaling protein TERM 887 928126 - 928076 - T 100 -9.3 -5.02502 | opp_overlap 928076 TATAGTATATAAAAA TAGGGCAAAGTGGAAGTTTTGAA GTTTA TTAAAAATTTACACTTTACCCTA TTTTGTTATGTCTTC TERM 888 928076 - 928126 + T 95 -9.3 -4.90002 | opp_overlap 928076 TATAGTATATAAAAA TAGGGCAAAGTGGAAGTTTTGAA GTTTA TTAAAAATTTACACTTTACCCTA TTTTGTTATGTCTTC plfA 928898 - 928164 - | pyruvate formate-lyase activating enzyme TERM 889 928956 - 929005 + r 79 -3.7 -5.75538 | opp_overlap 928961 TATAATATTTCTCTA AAAAAGGCCATCTTATACCAGAA ATAA TTCAAATATAAGATAGCCTTTTA TTTTTATTTTTTACA TERM 890 929000 - 928961 - R 100 -10.2 -5.0133 | opp_overlap 928956 TATTTCTCTAAAAAA GGCCATCTTATACCAGAA ATAA TTCAAATATAAGATAGCC TTTTATTTTTATTTT plfB 931289 - 929058 - | formate acetyltransferase TERM 891 929465 - 929479 + g 76 -6.4 -4.65916 | overlap 929447 CAGCTCTTCTACCAT CTGGTG TAT TACCAG TTTTCTTACCATAAA TERM 892 930493 - 930481 - G 72 -6.3 -4.24285 | TATATATCTAAGAAA GTAGA TGT TCTAC CTAAAGACATTGCAG CD0760 931648 - 932643 + | Ca2+/Na+ antiporter CD0761 932734 - 934347 + | putative ATP-dependent RNA helicase TERM 893 934526 - 934558 + F 77 -8.7 -3.33094 | overlap 934521 AAAATGTATATTAGT TCCTTTTTTTCAAAT CTG ATTTGAAAAAGAGAA TATTAATTATCTATA CD0762 934622 - 936607 + | putative transcription antiterminator TERM 894 936654 - 936666 + G 70 -3.5 -5.11063 | TCACTTATTACAGTG TATTT ATT AAATA TTTTTCTTGGATACT gutM 936612 - 937046 + | glucitol operon activator protein gutA 937075 - 937635 + | PTS system, glucitol/sorbitol-specific IIc2 component srlE 937699 - 938067 + | PTS system, glucitol/sorbitol-specific IIB component TERM 895 938459 - 938449 - g 70 -5.4 -4.5394 | ACAGAAATAGGAAAA GGAA ATA TTCC ACCAAGTTTAGCATT TERM 896 938497 - 938513 + G 75 -9.5 -2.92475 | opp_overlap 938497 938496, overlap 938496 TTGTTTGCAATAAAC TCACAAG CAG CTTGTGA CTTTATACCAGTAGG TERM 897 938513 - 938497 - g 76 -9.5 -3.08812 | opp_overlap 938496 938497, overlap 938496 TTGTTTGCAATAAAC TCACAAG CAG CTTGTGA CTTTATACCAGTAGG srlE' 938092 - 938658 + | PTS system, glucitol/sorbitol-specific IIC component TERM 898 939041 - 939018 - g 81 -6.1 -5.05606 | opp_overlap 939020 939023 TTGAAGAAAAAGAAA TAGCACCTA TTGGCG TAGGTACTA TACTAAAAATAATTA srlB 938699 - 939064 + | PTS system, glucitol/sorbitol-specific IIA component gutD 939165 - 939938 + | sorbitol-6-phosphate dehydrogenase TERM 899 941892 - 941880 - g 70 -4.1 -4.88067 | ACTTATTTAGAAAAA GTGAT TGA ACCAC TTAAGCGTTTTGACA CD0769 940287 - 942431 + | putative formate dehydrogenase spoIIAA 942519 - 942854 + | anti-sigma F factor antagonist spoIIAB 942868 - 943296 + | anti-sigma F factor TERM 900 943373 - 943352 - g 90 -3.7 -6.19302 | overlap 943353 AGAGAAGAAAAAAAA CCTCTTCTT AGTC ATGAAGAGA CTCTAGAACTTATTG sigF 943319 - 944083 + | RNA polymerase sigma-F factor spoVAC 944363 - 944800 + | stage V sporulation protein AC TERM 901 945957 - 945943 - g 70 -8.6 -2.63752 | overlap 945937 945942 945940 945945 AAAAGCAGACAATAC CATGTG TTG CACATG CAGTAGTAATAGTAA spoVAD 944967 - 945980 + | stage V sporulation protein AD spoVAE 945994 - 946356 + | stage V sporulation protein AE TERM 902 946435 - 946406 - f 81 -8.7 -3.88137 | gap 1, opp_overlap 946407, overlap 946395 946407 946409 ATAACTTTTTATAAA GCAGGTGGATATCT TTT AGAT-TCCACCTGT TTTTTATATAAAGAA TERM 903 946434 - 946407 - f 89 -12.2 -2.924 | gap 1, opp_overlap 946407, overlap 946406 946395 946409 TAACTTTTTATAAAG CAGGTGGATATCT TTT AGAT-TCCACCTG TTTTTTATATAAAGA TERM 904 946407 - 946434 + F 100 -12.2 -5.36441 | gap 1, opp_overlap 946407 946406 946395 946409 TAACTTTTTATAAAG CAGGTGGATATCT TTT AGAT-TCCACCTG TTTTTTATATAAAGA TERM 905 946432 - 946409 - f 74 -9 -3.01125 | gap 1, opp_overlap 946407, overlap 946407 946406 946395 ACTTTTTATAAAGCA GGTGGATATCT TTT AGAT-TCCACC TGTTTTTTATATAAA CD0776 946539 - 947555 + | LacI family transcriptional regulator CD0777 947930 - 948772 + | hypothetical protein CD0778 948832 - 949251 + | hypothetical protein CD0779 949265 - 950410 + | putative amidohydrolase CD0780 950454 - 951389 + | hypothetical protein TERM 906 951591 - 951634 + T 73 -6.9 -4.22352 | gap 1, opp_overlap 951591, overlap 951588 951586 GTAATTATAAAAAAA GGAG-CGTTTCAAAGTGATT TTTTT AATCACCTTGAGACAACTCC TTATATTTTTATTTA TERM 907 951634 - 951591 - T 100 -9.1 -5.71983 | gap 1, opp_overlap 951591 951588 951586 GTAATTATAAAAAAA GGAGC-GTTTCAAAGTGATT TTTTT AATCACCTTGAGACAACTCC TTATATTTTTATTTA CD0781 954357 - 951664 - | penicillin-binding protein TERM 908 953807 - 953828 + g 70 -5.9 -4.19817 | TTACGAGGTATAGTT TGCTGTTCA GTTG TTAACAGCA TTTTGGATACCTGCA TERM 909 954619 - 954603 - g 83 -2.3 -5.98675 | TAGAAAAACAAAAAA TGAATTT AGA AAAATCA TAGCTATTTTTTTAG CD0782 954571 - 955269 + | hypothetical protein TERM 910 955385 - 955437 + T 87 -10.3 -3.22884 | opp_overlap 955388 955433 955435, overlap 955388 ACTATGTAAAATATC TAATATATTTGGTCTGTAGGT TAAATAAAAGT ACCTTTAGACCAAATATATTA TTAATAACTTAATAA TERM 911 955388 - 955434 + T 73 -7.6 -3.75105 | opp_overlap 955388 955433, overlap 955385 ATGTAAAATATCTAA TATATTTGGTCTGTAGGT TAAATAAAAGT ACCTTTAGACCAAATATA TTATTAATAACTTAA CD0783 956488 - 955481 - | putative stage IV sporulation protein TERM 912 956261 - 956246 - G 74 -7.6 -3.77219 | overlap 956229 ATCACCCAATCTAAA TGGAGA TGCT TCTCCA GGATTTCTAACTATG TERM 913 956988 - 956976 - g 81 -3.5 -5.58209 | opp_overlap 956976 TGAAATTCAAAAAAA TAAAA AAC TTTTA ATTTGTATAGACCCA CD0784 956716 - 957600 + | putative N-acetylmuramoyl-L-alanine amidase TERM 914 957609 - 957654 + F 78 -4.3 -5.56673 | gap 1 TAAATAAGATATGAA TAGAGA-AAAAGTTAGGTTGGT ATT ATTTGCCTAATTTTTATCTCTA TTTTTTATTGTACAT TERM 915 958646 - 958636 - g 70 -5.4 -4.57482 | GTAGCTAGAAATAAA GCTA GAG TAGC AACTAGAGGAATGGC CD0785 957802 - 959352 + | ABC transporter, ATP-binding protein CD0786 959381 - 960028 + | hypothetical protein CD0787 960430 - 960170 - | putative metal-binding protein CD0788 960647 - 961930 + | putative ATP/GTP-binding protein TERM 916 961964 - 961978 + G 71 -5.8 -4.4195 | opp_overlap 961962 961964 961976 CTGGGAAAATATAGA TAATCT TGA AGATTA TTTTATAACCTATCT TERM 917 962465 - 962441 - g 88 -8 -4.91109 | gap 1 TCTCTACGACAAAAA TGCACAG-ACT AGGC AGTACTGTGCA AAAGCTCTTTCAAAA CD0789 961932 - 962615 + | hypothetical protein CD0790 962701 - 963144 + | NUDIX family hydrolase TERM 918 963167 - 963185 + F 100 -10.3 -5.26875 | opp_overlap 963171 TTTAGAGGATTCTGA GGAAGGG ATAGC CCCTTCC TTTTTTAATTGAAGC TERM 919 963594 - 963583 - g 82 -4.4 -5.5454 | TGAAATAAAGAAAAA GCAT AAAG ATGC AACTCACAATGTGTG CD0791 963449 - 964093 + | hypothetical protein TERM 920 964155 - 964191 + T 100 -19.9 -4.90296 | opp_overlap 964155 ATTTTTAAGTGAAAA GCCATTAAATTGATTTA ATC TAAATCAATTTAATGGC TTTTTATCGGATTTT TERM 921 964191 - 964155 - T 100 -19.9 -4.27584 | opp_overlap 964155 ATTTTTAAGTGAAAA GCCATTAAATTGATTTA ATC TAAATCAATTTAATGGC TTTTTATCGGATTTT TERM 922 964200 - 964217 + T 79 -4.9 -5.63103 | TAATGGCTTTTTATC GGATTTT GCAC AGAATCC TTTTTTTACTTCAAA CD0792 964556 - 964179 - | hypothetical protein TERM 923 964358 - 964374 + g 82 -5.3 -5.4492 | TAGGTATAACCAATT TAAAAAT TAC ATTTTTA TTTTTTATATGTATA CD0793 964942 - 964556 - | hypothetical protein nadE 965121 - 965876 + | NH3-dependent NAD(+) synthetase TERM 924 966015 - 966003 - g 72 -7.7 -3.61883 | AAAAGGTAAACAAGA TGCTC AAA GAGCA AAGATATTTACTAAA CD0795 965959 - 966678 + | hypothetical protein TERM 925 966770 - 966819 + T 100 -13.1 -5.24799 | opp_overlap 966769 966797 TAAAATAGACATACG CACCTCTAACCTATATTTGCATA ATAA TATGTAAGCATAGGTAAGGGGTG TTTTTATATTTATAG CD0796 967849 - 966845 - | LacI family transcriptional regulator CD0797 968115 - 969011 + | putative hydroxymethylglutaryl-CoA lyase TERM 926 969762 - 969746 - g 77 -4.5 -5.24449 | overlap 969747 TATAAACTTAAAAAA CCTATAA ATG TTATAGA TAGTAAGCAAATAGA CD0798 969149 - 970411 + | hypothetical protein act 970487 - 971680 + | putative beta-alanine CoA-transferase TERM 927 971799 - 971841 + F 100 -10.7 -4.41895 | opp_overlap 971799 971797, overlap 971801 971807 CAGAAGCATTTAAGA TGGGAAAAGCTACTTAGAC ATTGA GTCTTTGTGGCTTTTCCTA TTTTCATTAAGAATT TERM 928 971801 - 971839 + F 95 -11.1 -3.8125 | opp_overlap 971799 971797, overlap 971799 971807 GAAGCATTTAAGATG GGAAAAGCTACTTAGAC ATTGA GTCTTTGTGGCTTTTCC TATTTTCATTAAGAA TERM 929 972016 - 972039 + F 80 -6 -5.19916 | opp_overlap 972010 972015, overlap 972017 TATCAAAAATGAGAC TGCATTCTCA AAAA TGAGACTGCG TTTTTTAAGTATTTT TERM 930 972017 - 972038 + F 70 -7.3 -3.6951 | opp_overlap 972010 972015, overlap 972016 ATCAAAAATGAGACT GCATTCTCA AAAA TGAGACTGC GTTTTTTAAGTATTT crt1 972321 - 973103 + | 3-hydroxybutyryl-CoA dehydratase (crotonase) CD0801 973198 - 974538 + | permease CD0802 974669 - 975907 + | putative CoA-transferase TERM 931 976201 - 976184 - g 75 -4.9 -5.04385 | gap 1, opp_overlap 976184, overlap 976186 GAGATTGCCAAAAAA TG-TGCAG CAT CTGCAGCA ATATTATCAATACAC CD0803 975947 - 977089 + | putative acyl-CoA dehydrogenase CD0804 977100 - 977894 + | electron transfer flavoprotein beta-subunit CD0805 977905 - 978927 + | electron transfer flavoprotein alpha-subunit TERM 932 978991 - 978955 - f 74 -8.3 -3.4277 | opp_overlap 978955, overlap 978958 978961 ATTGAATATGTAGAA TGATAAGTCTTATAATA TTG TATTGTAAGACTTATTA TTTTTGCTGAAGGTT TERM 933 978955 - 978991 + F 100 -12.7 -4.73388 | opp_overlap 978955 978958 978961 ATTGAATATGTAGAA TGATAAGTCTTATAATA TTG TATTGTAAGACTTATTA TTTTTGCTGAAGGTT TERM 934 978988 - 978958 - f 80 -10 -2.86426 | opp_overlap 978955, overlap 978955 978961 GAATATGTAGAATGA TAAGTCTTATAATA TTG TATTGTAAGACTTA TTATTTTTGCTGAAG TERM 935 980186 - 980200 + G 70 -8.6 -2.62263 | TATGATGTGTGACCT TCCATC TAA GATGGA TAATATCAGCAGAGT CD0806 979026 - 980402 + | putative sigma-54-dependent transcriptional regulator TERM 936 980501 - 980523 + T 100 -9.3 -5.66338 | opp_overlap 980504 AAAAGTAGATGTGAA GTACTAATG TCAAT CATTAGTAC TTTTTTATTATATTT CD0807 981078 - 980734 - | hypothetical protein TERM 937 981114 - 981132 + r 76 -6.1 -4.76213 | TTTTAGTATTTTAAG CTTAGAT AAGGA ATCTAAG TTTTATTAAATTTAT CD0808 981483 - 981247 - | hypothetical protein TERM 938 981305 - 981292 - G 76 -2.5 -5.57888 | ACTAAAAAAAGAAAA TATAT CCAA ATATA AGTGATATATAAATA TERM 939 982172 - 982150 - g 79 -5.7 -5.07107 | opp_overlap 982155 GAAATTTGTAAAAAA TCAAACAGA AACAA TCTGTTTAA GAGCAGTAAGACAAA CD0809 981566 - 982576 + | hypothetical protein floX 982712 - 983200 + | putative flavodoxin TERM 940 983805 - 983821 + G 91 -5.1 -5.86976 | overlap 983807 CGAGGTTGTGGATAT GTTGCAA CTT TTGCATC TTTTTTCTTTTATGC TERM 941 983807 - 983819 + G 76 -6.3 -4.55111 | overlap 983805 AGGTTGTGGATATGT TGCAA CTT TTGCA TCTTTTTTCTTTTAT CD0811 983376 - 985304 + | putative signaling protein CD0812 985481 - 985891 + | putative universal stress protein CD0813 985913 - 986215 + | putative PTS system, IIB component TERM 942 986221 - 986248 + T 100 -12 -5.186 | CTTAAATTAATCGTG GGTGTCGCACTA AGAA TAGAGCGACGCC TTTTTATATATTTTA CD0814 987124 - 986432 - | GntR family transcriptional regulator CD0815 988337 - 987150 - | transporter TERM 943 987447 - 987459 + g 81 -3.5 -5.64873 | opp_overlap 987447, overlap 987432 987429 TACTTGTAGTACAAA TATTA TAT TAATA TTTTTTATTGTTGGA TERM 944 989028 - 989015 - gH 72 -8.1 -3.26722 | opp_overlap 989014 989013 989009 TTTACACCTACAATA CCTGC TATA GCAGG GGTTGGTATGATTAA TERM 945 989439 - 989458 + GH 73 -3.7 -5.27335 | CTTTATCATTGGTTG TAATGTT ACCTGC AACATTA TTTTTATTTGGACCA TERM 946 989590 - 989602 + GH 72 -7.7 -3.63694 | GTTGGTTATATTTGG TGCTC ATA GAGCA TTATTACCAATAGGT TERM 947 989660 - 989676 + GH 78 -9.5 -3.04398 | overlap 989659 CAGAATTTATTGGCA TTTGCAG GAG CTGCAAA CTTTTCACAAGCAGG TERM 948 990518 - 990477 - gH 78 -5.4 -5.15634 | gap 2, opp_overlap 990489 CATTTGATTAAAAAA TAGCTACGCACACTCGTGAC TTTA GTCATGAGT-TA-GTAGCTA AAATAGTCAGCATAT TERM 949 990489 - 990508 + GH 73 -8.6 -3.18582 | opp_overlap 990477 AAATAGCTACGCACA CTCGTGAC TTTA GTCATGAG TTAGTAGCTAAAATA TERM 950 990571 - 990557 - gH 72 -8.6 -3.01912 | opp_overlap 990548, overlap 990541 CTATATGTAGAGATA GGATAG AAC CTATCC AATACTACTTGAATT TERM 951 991402 - 991391 - g 74 -3 -5.38951 | AATGCATATAAAAAA TTCT TTAA AGAA AAAGCAGGACTTCCT TERM 952 991739 - 991723 - g 73 -5.9 -4.54449 | AGAGTTTATAGAAAA TCCTAAG TAT CTTAAGA AGTCATTAAACAAGC tlpB 991118 - 992236 + | putative transposase-like protein B TERM 953 992263 - 992249 - gf 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG CD0816 988673 - 992434 + | PTS system, IIABC component CD0818 992746 - 994152 + | putative 6-phospho-beta-glucosidase CD0819 994180 - 995028 + | putative transcription antiterminator CD0820 995689 - 996381 + | two-component response regulator TERM 954 996804 - 996767 - g 100 -12.2 -3.14229 | gap 1, opp_overlap 996766, overlap 996765 996775 AGAGCGGGAGGAATA CCTTGAAATCGCTAGGC GTAGA GCCTA-CGACCTCAAGG ATTACATTGATGTTC CD0821 996378 - 997313 + | two-component sensor histidine kinase TERM 955 997323 - 997352 + F 81 -5.8 -5.3236 | gap 1 ATATAAAATTGTTTT TCCCCCATGTG ACATGTATA CACA-GGGGGA TTTTTTGTAAGTTAT TERM 956 998356 - 998335 - g 70 -8.1 -3.08992 | overlap 998345 ATTTATGCGAAGATA CTCTTGAAG ATTA CTTCAAGAA AGTAACAGGGGGTGA CD0822 997461 - 998384 + | putative lantibiotic ABC transporter,ATP-binding protein CD0823 998377 - 999138 + | putative lantibiotic ABC transporter, permease protein CD0824 999148 - 999930 + | putative lantibiotic ABC transporter, permease protein TERM 957 1000016 - 1000051 + F 100 -16.4 -5.28414 | opp_overlap 1000016 1000019 TGCTCATGTATTCAA GAAGCTACAGTTTTGA TTTT TCATAACTGTAGCTTC TTTTTGTATTTATTA TERM 958 1000051 - 1000016 - f 100 -16.4 -3.07816 | opp_overlap 1000016, overlap 1000019 TGCTCATGTATTCAA GAAGCTACAGTTTTGA TTTT TCATAACTGTAGCTTC TTTTTGTATTTATTA TERM 959 1000048 - 1000019 - f 95 -12.3 -3.68569 | opp_overlap 1000016, overlap 1000016 TCATGTATTCAAGAA GCTACAGTTTTGA TTTT TCATAACTGTAGC TTCTTTTTGTATTTA rbr 1000307 - 1000843 + | rubrerythrin CD0826 1000875 - 1001264 + | putative oxidative stress regulatory protein rbo 1001301 - 1001687 + | rubredoxin oxidoreductase (desulfoferrodoxin) CD0828 1001814 - 1003256 + | putative oxidative stress protein CD0829 1003553 - 1004368 + | metallo-beta-lactamase superfamily protein TERM 960 1004408 - 1004429 + F 100 -8.9 -5.52096 | opp_overlap 1004408 GTTGAAGGTTAAAAA GATATTTTC TATA GAAAATATC TTTTTTGTTACGTTT TERM 961 1004429 - 1004408 - f 89 -8.9 -4.66833 | opp_overlap 1004408 GTTGAAGGTTAAAAA GATATTTTC TATA GAAAATATC TTTTTTGTTACGTTT TERM 962 1004720 - 1004710 - f 76 -2.6 -5.82036 | ATAATAAAGAAAAAA TTAT ATA ATAA TAAAGAAAAAATGTA CD0830 1004970 - 1006154 + | hypothetical protein CD0831 1007640 - 1006531 - | putative ATP-dependent RNA helicase TERM 963 1007659 - 1007669 + H 72 -4 -5.4505 | TATCTTACCTTTCAT GAAA AAT TTTC TTTTTTATTAACCAA TERM 964 1007809 - 1007845 + H 79 -9.1 -3.61536 | TTAGTAGGAATTTTA TAGGTTTATTTTTAAAG GTT TTTTGAAAATAAATCTA TTTAAAAATTAAATT TERM 965 1008154 - 1008143 - g 74 -3 -5.41941 | opp_overlap 1008143 1008145, overlap 1008145 CAAAGGAAATAAAAA TAGT AGAT ACTA CTTTAAGAGATGGAG aksA 1008103 - 1009296 + | trans-homoaconitate synthase CD0833 1009321 - 1011246 + | aconitate hydratase CD0834 1011268 - 1012263 + | putative isocitrate/3-isopropylmalate dehydrogenase TERM 966 1012306 - 1012330 + F 79 -5.1 -5.46657 | gap 1, opp_overlap 1012299 1012306 1012304 AGATTGAAGGAAAGA GGCTT-TCTC AAAATA GAGATAAGCC TTTTTTATTGGAATG TERM 967 1012528 - 1012515 - f 78 -5.3 -5.2696 | GTAAAATTTAAAAAA GTTGA ACTT TCAAC TAAAAATGAAAATAT CD0835 1012613 - 1013062 + | MarR family transcriptional regulator CD0836 1013096 - 1013590 + | putative acetyltransferase TERM 968 1013879 - 1013904 + G 74 -7.7 -3.79473 | TGTAGAACTAAAGGT GGTGGATTTTT CTTA AAAAATGCACC TTTAGCTATTGTAAT TERM 969 1014106 - 1014092 - g 70 -5 -4.60317 | AGAGAAGAATTAAAA GTACCT AGC AAGTAC AGTGTAGAATGTATA CD0837 1013687 - 1014208 + | putative reductase CD0838 1014397 - 1014708 + | putative DNA-binding protein TERM 970 1014997 - 1014984 - g 81 -3.9 -5.62288 | TGAAGAAAATAAAAA CAATA TACT TATTG AAAAGTGTAAGCTGA CD0839 1014736 - 1015422 + | putative membrane-associated CAAX amino terminal protease TERM 971 1015440 - 1015475 + F 100 -9.3 -5.15682 | opp_overlap 1015443 AGTATAATCGGTTTA TAAGGTTGTTTTAAA TTTAAT TTTAAATCAACCTTA TTTTATTTGTGTTTT CD0840 1015654 - 1016538 + | putative hydrolase TERM 972 1016824 - 1016805 - g 70 -5.6 -4.34912 | AAGGAATTAAAAGAA GCTACAGG TCTT CCAGCAGC AACTTCATTTAAACA CD0841 1016637 - 1017812 + | 5-aminoimidazole-4-carboxamide ribonucleotide transformylase TERM 973 1017852 - 1017874 + F 100 -12.2 -5.99154 | opp_overlap 1017852 TAGATTAAGTAAAAA TCTACAACAA GTT TTGTTGTAGA TTTTTTTATTTGCTG TERM 974 1017874 - 1017852 - f 100 -12.2 -4.91873 | opp_overlap 1017852 TAGATTAAGTAAAAA TCTACAACAA GTT TTGTTGTAGA TTTTTTTATTTGCTG TERM 975 1018342 - 1018332 - g 72 -5.4 -4.72272 | TTTGTTTATTAAAAA TGGA GAT TCCA AAGTTATAAAAGATA TERM 976 1018763 - 1018753 - g 70 -5.4 -4.57516 | opp_overlap 1018753 1018750 AGATTTAAAGTAAAA GATG ATT CATC TTGTTTATATTTAGA CD0842 1017940 - 1018794 + | hypothetical protein CD0843 1018838 - 1020073 + | putative glycosyl transferase TERM 977 1020112 - 1020095 - f 76 -4.2 -5.42265 | opp_overlap 1020095, overlap 1020086 1020088 TTAAATTATAAAAAA GTGTAA CTATTT TTACAC TATTTTTAAATGATT CD0844 1020174 - 1021115 + | cell surface protein CD0845 1021687 - 1021334 - | putative nuclease CD0846 1021974 - 1022894 + | hypothetical protein TERM 978 1023069 - 1023042 - f 78 -6.4 -4.85599 | opp_overlap 1023042 TTGAGTTGACAAAAA CCACTTTTAACA CTAC TATTATAAGTGG TTGGTAAAATAATAT CD0847 1023154 - 1023588 + | hypothetical protein CD0848 1023611 - 1025146 + | hypothetical protein abgB2 1025230 - 1026597 + | putative aminobenzoyl-glutamate utilization protein CD0850 1026632 - 1026856 + | hypothetical protein TERM 979 1026975 - 1026960 - T 72 -4.8 -4.96657 | opp_overlap 1026974, overlap 1026967 1026974 AGAAAGATAATAAAA CATTAT AGAA ATAATG AAATATTTCATATGT TERM 980 1027286 - 1027239 - T 76 -8.1 -3.66666 | gap 1, opp_overlap 1027242 1027244 1027245, overlap 1027242 1027245 TGTAAAAGTGTGAAA GAAGGA-TGTAGGTAAATTTGT CTTAT ACAAATTTACCTACAGTATTTC TTACACACTTTTTAT TERM 981 1027242 - 1027282 + T 77 -7.8 -4.17132 | opp_overlap 1027239 1027242 1027245, overlap 1027244 1027245 AAAAGTGTGAAAGAA GGATGTAGGTAAATTTGT CTTAT ACAAATTTACCTACAGTA TTTCTTACACACTTT TERM 982 1027244 - 1027280 + T 95 -12.6 -3.67877 | opp_overlap 1027242 1027239 1027245, overlap 1027242 1027245 AAGTGTGAAAGAAGG ATGTAGGTAAATTTGT CTTAT ACAAATTTACCTACAG TATTTCTTACACACT TERM 983 1027245 - 1027279 + T 100 -16.1 -2.80244 | opp_overlap 1027242 1027239 1027245, overlap 1027244 1027242 AGTGTGAAAGAAGGA TGTAGGTAAATTTGT CTTAT ACAAATTTACCTACA GTATTTCTTACACAC TERM 984 1027279 - 1027245 - T 100 -16.1 -3.02639 | opp_overlap 1027245 1027244 1027242, overlap 1027242 1027239 AGTGTGAAAGAAGGA TGTAGGTAAATTTGT CTTAT ACAAATTTACCTACA GTATTTCTTACACAC CD0851 1027704 - 1027306 - | hypothetical protein CD0852 1028150 - 1027707 - | MarR family transcriptional regulator oppB 1028468 - 1029454 + | oligopeptide ABC transporter, permease protein TERM 985 1029685 - 1029657 - g 100 -12.7 -2.53911 | opp_overlap 1029665, overlap 1029665 GCAAGTTCTAATTTA GCTCCAAATAAAA CTT TTTTATTTGGAAC AGACTCAATGGGTAG TERM 986 1029808 - 1029822 + G 74 -8.6 -3.37796 | ATGGTAGTATAAGTG GTTCAG CAT CTGAAC TTGTAGATGATGCAA oppC 1029438 - 1030349 + | oligopeptide ABC transporter, permease protein oppA 1030462 - 1032030 + | oligopeptide ABC transporter, substrate-binding lipoprotein TERM 987 1032050 - 1032077 + F 95 -12.9 -3.65902 | opp_overlap 1032050 GAAATTAATTAGAAA CCTTAGGGATA AAAATA TATCCCTAAGG TTTGAATAGCATAGG TERM 988 1032077 - 1032050 - f 100 -12.9 -4.11938 | opp_overlap 1032050 GAAATTAATTAGAAA CCTTAGGGATA AAAATA TATCCCTAAGG TTTGAATAGCATAGG oppD 1032105 - 1033130 + | oligopeptide ABC transporter, ATP-binding protein TERM 989 1034158 - 1034108 - f 85 -10.1 -3.19634 | gap 1, opp_overlap 1034113, overlap 1034113 ATTTGAAATACAAAC TAAAACCCTATTTTTGGAGAAATT TTAA AACTACTCCAAAA-TAGGGTTTTT TATTTCTACTTTTCA TERM 990 1034153 - 1034113 - f 100 -10 -4.68919 | gap 1, opp_overlap 1034113, overlap 1034108 AAATACAAACTAAAA CCCTATTTTTGGAGAAATT TTAA AACTACTCCAAAA-TAGGG TTTTTTATTTCTACT TERM 991 1034113 - 1034153 + F 100 -7.8 -5.73978 | gap 1, opp_overlap 1034113 1034108 AAATACAAACTAAAA CCCTATTTTTGGAGAAATT TTAA AACTACTCCAAAA-TAGGG TTTTTTATTTCTACT TERM 992 1034252 - 1034296 + F 71 -5.3 -4.6468 | opp_overlap 1034252 1034256, overlap 1034253 1034256 ATAAAATTAAAAATA GTAATGTAGAAAAAATGAG TAATAAT CTTATTTTTTCTACAATAA TTTTCTATAATTTAA TERM 993 1034253 - 1034295 + F 77 -8.8 -3.37724 | opp_overlap 1034252 1034256, overlap 1034252 1034256 TAAAATTAAAAATAG TAATGTAGAAAAAATGAG TAATAAT CTTATTTTTTCTACAATA ATTTTCTATAATTTA TERM 994 1034256 - 1034292 + F 81 -10.5 -2.53176 | opp_overlap 1034256 1034252, overlap 1034253 1034252 AATTAAAAATAGTAA TGTAGAAAAAATGAG TAATAAT CTTATTTTTTCTACA ATAATTTTCTATAAT TERM 995 1034292 - 1034256 - f 75 -8.3 -3.63435 | opp_overlap 1034253 1034252 1034256, overlap 1034252 AATTAAAAATAGTAA TGTAGAAAAAATGAG TAATAAT CTTATTTTTTCTACA ATAATTTTCTATAAT TERM 996 1036980 - 1036970 - f 70 -4 -5.18643 | opp_overlap 1036970, overlap 1036977 CTAAGCAAAATAAAA GATA TAG TATC TCAATTAGATAAAAA TERM 997 1037074 - 1037104 + F 76 -2.8 -5.90981 | gap 1 AATAATCGAAAAAGA TTACCAA-TGAGT ATAAAA ACTTATTTGGTAA TTTTTTTTAGTCTAA CD0860 1037298 - 1037927 + | hypothetical protein CD0861 1038062 - 1038388 + | PTS system, IIB component TERM 998 1038928 - 1038918 - g 70 -4 -4.93877 | opp_overlap 1038918, overlap 1038913 GTGTAGTAAATAAAA GTTT TAG AAAC TTAACTCCAATGATA CD0862 1038389 - 1039693 + | PTS system, IIC component CD0863 1039717 - 1040046 + | PTS system, IIA component CD0864 1040194 - 1041522 + | 6-phospho-alpha-glucosidase CD0865 1041845 - 1042699 + | hypothetical protein CD0866 1042904 - 1043884 + | hypothetical protein CD0867 1044087 - 1044536 + | hypothetical protein CD0868 1045626 - 1044697 - | hypothetical protein TERM 999 1044765 - 1044782 + g 71 -7.1 -3.78235 | CTTGAAGTTCAGCTT TAAACTC AGGA GAGTTTA TTATGTTAATTATAG TERM 1000 1045839 - 1045829 - g 76 -2.6 -5.52384 | TTGTTATGAAAAAAA TATT GGG AATA TTAGGATTAGTTGCA TERM 1001 1046096 - 1046083 - g 71 -6.7 -4.02532 | opp_overlap 1046083 1046081 CAACAACAAATAGAA CAAGG AGCA CCTTG TGATTTATTTATTTC modA 1045819 - 1046631 + | putative molybdenum ABC transporter,substrate-binding protein TERM 1002 1046763 - 1046710 - f 100 -17.3 -3.40899 | opp_overlap 1046715 1046721, overlap 1046715 AATTGTGTATTATAA TAAAATGGAAATAGTGAAATTAATA GAGT TATTAGTTTCACTATTTCCATTTAA AATTAAGGAGGGAAA TERM 1003 1046715 - 1046758 + F 100 -19.4 -3.66178 | opp_overlap 1046710 1046715, overlap 1046721 TGTATTATAATAAAA TGGAAATAGTGAAATTAATA GAGT TATTAGTTTCACTATTTCCA TTTAAAATTAAGGAG TERM 1004 1046758 - 1046715 - f 100 -17.2 -4.81212 | opp_overlap 1046715 1046721, overlap 1046710 TGTATTATAATAAAA TGGAAATAGTGAAATTAATA GAGT TATTAGTTTCACTATTTCCA TTTAAAATTAAGGAG TERM 1005 1046721 - 1046752 + F 100 -11.2 -3.85567 | opp_overlap 1046715 1046710, overlap 1046715 ATAATAAAATGGAAA TAGTGAAATTAATA GAGT TATTAGTTTCACTA TTTCCATTTAAAATT modB 1046780 - 1047463 + | putative molybdenum ABC transporter, permease protein modC 1047464 - 1048540 + | putative molybdenum ABC transporter, ATP-binding protein maa 1048546 - 1049103 + | maltose O-acetyltransferase TERM 1006 1049131 - 1049107 - T 71 -7.3 -3.87147 | overlap 1049105 1049110 ATAGAAGAATAAATA TGATTGTATAA AGT TTATACAAACA AATTAAGAGCATTTA TERM 1007 1049228 - 1049185 - T 100 -18.6 -5.52079 | opp_overlap 1049187, overlap 1049187 ACATTAAAATAAAAA TATATGCCTGTTTCTATAAA TTAA TTTATAGAAACAGGCATATT AATCGTATATAGAAA TERM 1008 1049226 - 1049187 - T 100 -21.2 -4.37486 | opp_overlap 1049187, overlap 1049185 ATTAAAATAAAAATA TATGCCTGTTTCTATAAA TTAA TTTATAGAAACAGGCATA TTAATCGTATATAGA TERM 1009 1049187 - 1049226 + T 100 -21.2 -3.26545 | opp_overlap 1049187 1049185 ATTAAAATAAAAATA TATGCCTGTTTCTATAAA TTAA TTTATAGAAACAGGCATA TTAATCGTATATAGA CD0873 1050274 - 1049252 - | ABC transporter, substrate-binding lipoprotein CD0874 1051160 - 1050405 - | ABC transporter, ATP-binding protein TERM 1010 1050726 - 1050743 + g 71 -2.1 -5.47218 | gap 1, overlap 1050727 1050728 TCCTGATAAAAATTT TA-CTTGA ACA TCAAGGTA TTTTTTTAAATCAAG TERM 1011 1051133 - 1051143 + g 72 -4 -5.04601 | opp_overlap 1051133, overlap 1051136 ATGGATTAGGGAAAC TCTT TGA AAGA TTTTTAATTTGTAAC CD0875 1052049 - 1051147 - | ABC transporter, permease protein TERM 1012 1052141 - 1052117 - R 100 -10.1 -5.60993 | TTGTGTATAAAAAAA CCACATAGTGT ACA AAACTATGTGG TAAAAACACGAATAA TERM 1013 1052155 - 1052182 + r 75 -8.5 -3.60661 | opp_overlap 1052157, overlap 1052157 GGTAAAAACACGAAT AAGCCACATAG TTTAAT CTATGTGGCTC TTATATAGTTAAATG TERM 1014 1052180 - 1052157 - R 100 -11.1 -3.91821 | opp_overlap 1052157 1052155 TAAAAACACGAATAA GCCACATAG TTTAAT CTATGTGGC TCTTATATAGTTAAA TERM 1015 1052157 - 1052180 + r 93 -11.1 -3.376 | opp_overlap 1052157, overlap 1052155 TAAAAACACGAATAA GCCACATAG TTTAAT CTATGTGGC TCTTATATAGTTAAA TERM 1016 1052691 - 1052708 + r 77 -7 -4.37886 | opp_overlap 1052691 TAACTTTCATAATCA GTCGTC AATATA GACGAC TTTTATGGAAAATGA CD0876 1053895 - 1052858 - | ABC transporter, substrate-binding lipoprotein CD0877 1054747 - 1053992 - | ABC transporter, ATP-binding protein TERM 1017 1054720 - 1054730 + g 72 -4 -5.04601 | opp_overlap 1054720, overlap 1054723 ATGGATTAGGGAAAC TCTT TGA AAGA TTTTTAATTTGTAAC CD0878 1055636 - 1054734 - | ABC transporter, permease protein TERM 1018 1055738 - 1055714 - H 90 -6.5 -5.71712 | TTTGATATAAAAAAA CCACACAGT ATATATA ACTGTATGG CAAAAATTCGAATAA TERM 1019 1056861 - 1056842 - g 82 -5.2 -5.38321 | AAATATTATAAAAAA TAAAAATT TAAC AATTTTTA AAGATAGAGTATCTA CD0879 1056435 - 1058015 + | putative carbohydrate kinase TERM 1020 1058066 - 1058088 + F 70 -7.2 -3.81701 | opp_overlap 1058071, overlap 1058070 1058077 TTGATATAATACTAT TAAATTAATC TTA GATTAGTTTA TTCTATTGATTTGTA CD0880 1058187 - 1058633 + | hypothetical protein TERM 1021 1059297 - 1059278 - g 79 -7.2 -4.44355 | GAAGGTGAAAAACAA TCTGCTAT ATTA ACAGCAGA AGCCAAAAAAGAAGC CD0881 1058654 - 1059697 + | hypothetical protein TERM 1022 1059774 - 1059813 + F 100 -8.8 -5.06414 | opp_overlap 1059778 1059781, overlap 1059778 CAAAAATGCACGTTG AAAAGAAGAGGACTTATA AATT TTTAAGTCTTCTTCTTTG TTTTTATTAGAAAGA TERM 1023 1059778 - 1059809 + F 100 -9.6 -5.05606 | opp_overlap 1059778 1059781, overlap 1059774 AATGCACGTTGAAAA GAAGAGGACTTATA AATT TTTAAGTCTTCTTC TTTGTTTTTATTAGA TERM 1024 1059809 - 1059778 - f 73 -7.4 -4.1196 | opp_overlap 1059778 1059774, overlap 1059781 AATGCACGTTGAAAA GAAGAGGACTTATA AATT TTTAAGTCTTCTTC TTTGTTTTTATTAGA glgC 1060468 - 1061628 + | glucose-1-phosphate adenylyltransferase glgD 1061630 - 1062760 + | glycogen biosynthesis protein TERM 1025 1063291 - 1063273 - g 82 -5.4 -5.38398 | opp_overlap 1063276, overlap 1063274 ATAAAAATATAAAAA CTATGTAT ACT ATACATAA TCTCCAATATCAAGG glgA 1062789 - 1064231 + | glycogen synthase TERM 1026 1064696 - 1064721 + G 85 -11.3 -2.52464 | opp_overlap 1064695 1064694 AAAAATTTGTAAATG GTTATCAGGTA GAAG TGCCTGATAAC TGGCTTACAGAAGGA TERM 1027 1065174 - 1065147 - g 71 -2.2 -5.34632 | opp_overlap 1065154, overlap 1065154 1065169 AAGAAAATATAAAAA GAACAAATTA AATATTAA TAATTTATTC GATAAGGTAGCAATT glgP 1064224 - 1066665 + | glycogen phosphorylase TERM 1028 1066735 - 1066708 - g 100 -10 -4.82901 | opp_overlap 1066708 CTCTTGGGATAAAAA TTTTAAGGCTCC GTTT GGAGCTTTAAAA TTTGATGAGGAATTG TERM 1029 1066708 - 1066735 + G 100 -12.2 -3.737 | opp_overlap 1066708 CTCTTGGGATAAAAA TTTTAAGGCTCC GTTT GGAGCTTTAAAA TTTGATGAGGAATTG TERM 1030 1067077 - 1067063 - g 77 -8.6 -3.70571 | TATAAAGATTTTAAA GTACCA ACA TGGTAC AAAGAAGGAATACTT CD0886 1066670 - 1068535 + | putative alpha-amylase TERM 1031 1068576 - 1068611 + F 100 -10.7 -5.72616 | opp_overlap 1068585 GAAAATAAGGTGAAT GTGGAAAGAGTTTTG TTTTAT CAAAACTTTTTCTAC TTTTTTTGTATAAAT TERM 1032 1068842 - 1068832 - g 74 -5.4 -4.98061 | ATATATCAAAGAAAA TCCA AAA TGGA GAATATGAAGCTAAT CD0887 1068780 - 1069433 + | GntR family transcriptional regulator TERM 1033 1069415 - 1069445 + F 100 -9.2 -6.04378 | opp_overlap 1069419, overlap 1069419 TATAGCAGAGATGAA AAAAGAGAAGCTTT TAT AAAGTTTCTCTTTA TTTTTTTTATAATTT TERM 1034 1069441 - 1069419 - f 93 -7.8 -5.24989 | opp_overlap 1069415 1069419 GCAGAGATGAAAAAA GAGAAGCTTT TAT AAAGTTTCTC TTTATTTTTTTTATA TERM 1035 1069419 - 1069441 + F 100 -10 -5.39407 | opp_overlap 1069419, overlap 1069415 GCAGAGATGAAAAAA GAGAAGCTTT TAT AAAGTTTCTC TTTATTTTTTTTATA TERM 1036 1069787 - 1069766 - f 80 -6.7 -5.04601 | CTTATAAATTAAAAA TAGTAAACT CAAA AGCTTACTA AAACTCAAAAAAGTA speA 1070071 - 1071546 + | arginine decarboxylase speD 1071633 - 1072046 + | S-adenosylmethionine decarboxylase proenzyme TERM 1037 1072724 - 1072706 - g 72 -4.6 -4.9251 | overlap 1072708 AATAAAAAATTAAAA CAGATATT TCC AATATCAG AAGTTTATCAAGCAC speE 1072076 - 1072927 + | spermidine synthase speB 1072917 - 1073795 + | putative agmatinase TERM 1038 1073941 - 1073926 - T 73 -2.5 -5.74288 | ATAAACAACAAAAAA GAGCC CTCGAT AGCTC CTTTTCTAAAATATA cspA 1074175 - 1073975 - | cold shock protein TERM 1039 1074448 - 1074426 - H 70 -5.1 -4.74084 | opp_overlap 1074426 AAAGTAAAATTAAAA TATATAATA AAAAA TATTATATA TTAGATTGAAAAGTA TERM 1040 1074659 - 1074643 - g 81 -8.1 -4.25104 | GGGGTGGTATTAAAA TGTTTCA ATT TGAAACA CAAATACACAAATTA CD0893 1074603 - 1076132 + | iron-dependent hydrogenase TERM 1041 1076168 - 1076209 + F 100 -8.3 -5.4433 | gap 1, opp_overlap 1076159 1076170 AATACATATTGTTAA TAGAGTTGTTC-TAAGTTGA GGT TTAACTTTTGGACAACTCTA TTTTTATTTATATAT TERM 1042 1076524 - 1076507 - g 73 -3.5 -5.27476 | TTTAACAAAAGAAAA TATAGAA AAAA TTCCATA TGAAATAATTAAAGG CD0894 1076412 - 1077908 + | iron-dependent hydrogenase CD0895 1078053 - 1078967 + | metallo-beta-lactamase superfamily exported protein CD0896 1079085 - 1079276 + | hypothetical protein TERM 1043 1079354 - 1079383 + F 100 -8.7 -6.22691 | gap 1 CACAATCTAGTGTTT GAAGGTAGTCGG AAATCCC CCG-CTACCTTC TTTTTTTTATTGTTC CD0897 1079499 - 1079849 + | hypothetical protein TERM 1044 1080071 - 1080058 - f 70 -2.5 -5.52384 | opp_overlap 1080058 GTTTTACTAAAAAAA TATAT ATAA ATATA CTGTTATCAATAAGA TERM 1045 1080160 - 1080138 - g 73 -3.6 -5.31275 | opp_overlap 1080138 TTTGACCACAAAAAA TATTTAGA AGAGCAG TCTAAATA TATCTTAGAAAGAGT CD0898 1080111 - 1081616 + | hypothetical protein TERM 1046 1081691 - 1081712 + F 100 -9.5 -5.26119 | opp_overlap 1081680 ATAATAAAATCAGTA GGCTGTCTT GTAT AAGACAGTC TTTTGTTTTTAAAAC dinB 1082006 - 1083103 + | DNA polymerase IV TERM 1047 1083121 - 1083160 + F 93 -9.6 -4.49781 | opp_overlap 1083121 1083116 1083124 TTTGTTTAAATGAAA TAACACTAGCTTTAAT ACTATATA ATTGAGGCTAGTGTTA TTTTATGAATATTTT opuCA 1083366 - 1084502 + | glycine betaine/carnitine/choline ABC transporter, ATP-binding protein opuCC 1084489 - 1086042 + | glycine betaine/carnitine/choline ABC transporter, substrate-binding protein TERM 1048 1086178 - 1086188 + F 71 -5.4 -4.61353 | GATTATCTTTATTTT GAGA CAG TCTC TTATTTTTATGTATA CD0902 1086376 - 1087242 + | putative cation efflux rotein TERM 1049 1087283 - 1087273 - T 73 -2.6 -5.66684 | CAAGTTATAAAAAAA TATA ATT TATA AAAAAAATATTATAC TERM 1050 1087334 - 1087291 - T 100 -18.8 -5.97575 | opp_overlap 1087291, overlap 1087333 AATTTATAAAAAAAA TATTATACCATAAATAATTT ATAA AAATTATTTATGGTATAATA TTTTCTATAAAGAAA TERM 1051 1087291 - 1087334 + T 100 -18.8 -4.52589 | opp_overlap 1087291 1087333 AATTTATAAAAAAAA TATTATACCATAAATAATTT ATAA AAATTATTTATGGTATAATA TTTTCTATAAAGAAA CD0904 1089293 - 1088175 - | phage integrase TERM 1052 1089084 - 1089100 + g 74 -6.5 -4.42238 | opp_overlap 1089084 1089082 TATGTATTTATAACA CCTCTCT ACA AGAGTGG TTTTACTTGGAGTAA CD0905 1091465 - 1089801 - | phage protein TERM 1053 1091407 - 1091437 + g 71 -4.8 -4.75308 | overlap 1091408 TTGAAATTAAGATTT TTGATTTTTTCATC GTT GATGAGTAAATCAC TTTTTAACTGTTCAT TERM 1054 1091408 - 1091436 + g 73 -8.3 -3.441 | overlap 1091407 TGAAATTAAGATTTT TGATTTTTTCATC GTT GATGAGTAAATCA CTTTTTAACTGTTCA TERM 1055 1091728 - 1091694 - R 75 -6.6 -4.51174 | opp_overlap 1091694 TGAGCATAAGGAAAA GCCACTTAAAATTAGT TTT AATCATTTTAAGTAGC TCTTTTATTATTTTA CD0906 1093184 - 1091736 - | putative phage DNA-binding protein TERM 1056 1093810 - 1093834 + r 74 -5.1 -5.25906 | opp_overlap 1093801 1093810 TGATAATAAAAAAAA TAAAAGAGTGT GAA AAGCTCTTTTA TTTTTCTTCATTTAT TERM 1057 1093834 - 1093810 - R 82 -3 -6.17268 | opp_overlap 1093810, overlap 1093801 TGATAATAAAAAAAA TAAAAGAG TGTGAAAAG CTCTTTTA TTTTTCTTCATTTAT CD0907 1094164 - 1093832 - | putative phage regulatory protein CD0907A 1094326 - 1094514 + | putative phage regulatory protein TERM 1058 1094761 - 1094721 - g 81 -9.9 -3.39018 | opp_overlap 1094721 1094730, overlap 1094730 CGAGTATCTCAAAGA GTTTAAAAACCAACCTACT AAT AGTCAGTTGGTTTCAAAAC ATTCTAGTCAATTAT TERM 1059 1094752 - 1094730 - g 78 -7 -4.6856 | opp_overlap 1094730 1094721, overlap 1094721 CAAAGAGTTTAAAAA CCAACCTACT AAT AGTCAGTTGG TTTCAAAACATTCTA CD0908 1094548 - 1095342 + | phage protein CD0909 1095404 - 1095604 + | hypothetical protein TERM 1060 1095632 - 1095609 - T 100 -9 -5.29782 | CAGAGTTATAAAAAA GTAGTTAGAC ATGT ATCTAACTAC TAAAATAAATTTACT CD0910 1096269 - 1095643 - | hypothetical protein TERM 1061 1095750 - 1095737 - G 82 -5.3 -5.38951 | AATCTAGACAAAAAA CCTTT TTTT AAAGG AATATTATTTTCAGA TERM 1062 1096260 - 1096231 - G 78 -10.3 -2.76263 | opp_overlap 1096230 1096233 1096235, overlap 1096228 1096233 1096235 TGCACCACCTAACCA TATATTTATAGGA TTTA TCCTACAAATATA GTATATCAAAGGAGG CD0911 1096282 - 1096479 + | putative phage regulatory protein CD0912 1096496 - 1096825 + | putative phage DNA-binding protein CD0913 1096927 - 1097115 + | hypothetical protein CD0914 1097125 - 1097343 + | hypothetical protein CD0915 1097442 - 1097684 + | hypothetical protein TERM 1063 1097707 - 1097690 - f 81 -7 -4.87592 | opp_overlap 1097692 GCAGATATAAGAAAA GAGCCT ATAGCG AGGCTC AATTCAAAAATAGAA TERM 1064 1097911 - 1097899 - g 90 -6.3 -5.58522 | GATACAAAATAAAAA CACTA GAA TAGTG TCAGTAATAATAAAT CD0916 1097768 - 1098283 + | phage protein CD0917 1098285 - 1099187 + | putative phage recombination protein TERM 1065 1099658 - 1099648 - g 71 -6.8 -3.93288 | GTGTACGTAACGAAA CTCG TGA CGAG GGGAATAACAATAAC CD0918 1099200 - 1100039 + | phage protein CD0919 1100110 - 1100364 + | hypothetical protein TERM 1066 1100409 - 1100380 - f 75 -9.5 -2.63365 | opp_overlap 1100386, overlap 1100379 1100377 1100396 1100399 1100403 AAATACAAAAATTAT TAGGGAGTTAATA TAAC TATTAACTTCCTA GAAGTTAAAAAATAT TERM 1067 1100417 - 1100399 - f 74 -9 -2.95007 | opp_overlap 1100386, overlap 1100380 1100379 1100377 1100396 1100403 GAGTTAATATAACTA TTAACTTC CTA GAAGTTAA AAAATATTGGAGGTC CD0920 1100438 - 1100701 + | hypothetical protein CD0921 1100713 - 1101063 + | hypothetical protein TERM 1068 1101121 - 1101110 - g 71 -3 -5.252 | CATTTTTAGAAAAAA CTAT TGAT ATAG AAGATATGTTTGAGC CD0922 1101067 - 1101447 + | hypothetical protein CD0923 1101431 - 1101577 + | hypothetical protein CD0924 1101707 - 1101880 + | hypothetical protein CD0925 1101998 - 1102333 + | hypothetical protein CD0926 1102433 - 1102708 + | hypothetical protein TERM 1069 1103474 - 1103490 + G 70 -8.1 -3.05935 | opp_overlap 1103473 1103471 1103474 GAGGTGCTAAAACAG GTCTATA CTT TATAGAC TTAAATAAAAACTCT CD0927 1102804 - 1103877 + | putative DNA methylase CD0928 1103957 - 1104166 + | hypothetical protein CD0929 1104178 - 1105173 + | phage protein CD0930 1105182 - 1105907 + | phage protein CD0930A 1105904 - 1106077 + | hypothetical protein TERM 1070 1106146 - 1106129 - g 77 -7.1 -4.254 | opp_overlap 1106128 GGAACAGGTAAGAAA TCAAAGT GCAG ACTTTGA GTATTCAGAAGAAGG CD0931 1106070 - 1106441 + | hypothetical protein CD0932 1106444 - 1106911 + | hypothetical protein CD0933 1106990 - 1107175 + | hypothetical protein CD0934 1107180 - 1107428 + | hypothetical protein CD0934A 1107447 - 1107560 + | phage protein CD0935 1107557 - 1108363 + | phage modification methylase CD0936 1108377 - 1108784 + | putative phage endonuclease CD0937 1108799 - 1109524 + | putative phage anti-repressor TERM 1071 1109555 - 1109538 - f 100 -7.7 -6.01725 | opp_overlap 1109537 AATAAAAAGAAAAAA GGAGTGC TTTC ACACTCC ACTTGTCAAAAATAT CD0938 1109618 - 1110106 + | hypothetical protein TERM 1072 1110501 - 1110535 + F 90 -10.3 -3.33744 | opp_overlap 1110506, overlap 1110506 ATGTATCTCCCTACT AAAAATGCTAAGTTT ACTCC AAACTTAGCATTTTA CTTTTTAAAAAGAAA TERM 1073 1110530 - 1110506 - f 100 -10.9 -4.72272 | opp_overlap 1110501 1110506 TCTCCCTACTAAAAA TGCTAAGTTTA CTC CAAACTTAGCA TTTTACTTTTTAAAA TERM 1074 1110506 - 1110530 + F 100 -10.2 -4.77757 | opp_overlap 1110506, overlap 1110501 TCTCCCTACTAAAAA TGCTAAGTTT ACTCC AAACTTAGCA TTTTACTTTTTAAAA CD0939 1110833 - 1111027 + | hypothetical protein CD0940 1111060 - 1111638 + | phage protein TERM 1075 1111659 - 1111678 + F 91 -7.2 -5.626 | opp_overlap 1111659 CATAAAATCTAAAAT GACTATCT TGAT AGATGGTC TTTTTTTATACAATA CD0940A 1111715 - 1111903 + | hypothetical protein CD0941 1112200 - 1111883 - | phage protein CD0942 1112324 - 1112551 + | hypothetical protein TERM 1076 1112593 - 1112548 - f 78 -9.3 -3.02211 | opp_overlap 1112561, overlap 1112561 GAATCTTAAAGTAGA GTAAACAAAAAAAGAATCTCA ATTA TGAGGTTCTTTTTTTATTCCC AAAACAAACAAATAA TERM 1077 1112580 - 1112561 - f 91 -5 -5.99154 | opp_overlap 1112561, overlap 1112548 GAGTAAACAAAAAAA GAATCTCA ATTA TGAGGTTC TTTTTTTATTCCCAA TERM 1078 1112561 - 1112580 + F 93 -7.2 -5.7946 | opp_overlap 1112561 1112548 GAGTAAACAAAAAAA GAATCTCA ATTA TGAGGTTC TTTTTTTATTCCCAA TERM 1079 1112794 - 1112758 - g 91 -5.2 -5.72207 | opp_overlap 1112761, overlap 1112761 1112776 GTCAAAGGAAAAAAA GAAGGGTGCACC TATAAATAAAAGG GGTGCACCCTTT TCTAATAAAAATTCA TERM 1080 1112761 - 1112791 + G 88 -9 -4.4648 | opp_overlap 1112758 1112761 1112776 AAAGGAAAAAAAGAA GGGTGCACCTAT AAATAAA AGGGGTGCACCC TTTTCTAATAAAAAT TERM 1081 1112791 - 1112761 - g 82 -6.9 -4.90519 | opp_overlap 1112761, overlap 1112758 1112776 AAAGGAAAAAAAGAA GGGTGCACC TATAAATAAAAGG GGTGCACCC TTTTCTAATAAAAAT CD0943 1112621 - 1113313 + | putative phage DNA-binding protein CD0944 1113303 - 1114544 + | putative phage terminase, large subunit TERM 1082 1115870 - 1115888 + G 78 -9.6 -3.14881 | opp_overlap 1115872 ACTATTGTTTCTAAC CATCCTTG GGT CGAGGATG TTAATGACGAACTTG CD0945 1114550 - 1115989 + | phage portal protein TERM 1083 1117133 - 1117115 - g 76 -7.6 -4.03253 | TAGAAATAGAAAAGA TGATATTT CCA AAATATCA AAGAATACAAATTGG CD0946 1115979 - 1117472 + | putative phage minor head protein CD0946A 1117450 - 1117680 + | hypothetical protein TERM 1084 1117683 - 1117712 + F 70 -5.1 -4.84311 | overlap 1117678 TTATCAATGTTAGAA GCACTTACTGA ACAATAAA TTAGTAGGTGC TTTTATTATGTAAAA TERM 1085 1117938 - 1117949 + F 86 -4.4 -5.9218 | opp_overlap 1117933 1117938 AATCACTAGACAAAA GTCT TTAA AGAC TTTTTTTATTGTGTA CD0947 1117990 - 1118553 + | putative phage scaffold protein CD0948 1118565 - 1119464 + | putative phage major capsid protein TERM 1086 1119668 - 1119658 - g 70 -4 -4.95547 | TTTAGAAGAAGAAAA TAAG CAG CTTA AAGAGAAAAATAAAC CD0949 1119464 - 1119697 + | hypothetical protein CD0950 1119698 - 1120108 + | hypothetical protein CD0951 1120102 - 1120449 + | phage protein CD0952 1120449 - 1120874 + | phage protein TERM 1087 1120954 - 1120973 + G 87 -3.6 -5.95946 | AGCGAAGATGTGGAG CAAGGT ATTAATGA ACCTTG TTTTTTTATTGTTCC CD0953 1120864 - 1121304 + | hypothetical protein CD0953A 1121297 - 1121473 + | hypothetical protein TERM 1088 1121580 - 1121596 + G 81 -9.5 -3.67864 | opp_overlap 1121580 TCATTATCGGATAGA GGTATTG TTG CAATACC TTTAGAGTTAGATTG TERM 1089 1121596 - 1121580 - g 75 -9.5 -2.90212 | opp_overlap 1121580 TCATTATCGGATAGA GGTATTG TTG CAATACC TTTAGAGTTAGATTG CD0954 1121475 - 1122785 + | phage protein CD0955 1122802 - 1123272 + | phage protein TERM 1090 1123301 - 1123275 - f 80 -8.2 -4.31379 | opp_overlap 1123275 AGGAATGGAGTAAAA TACACATTTATA AAT TATATATGTGTA TTTTTTATATGAAAA TERM 1091 1123275 - 1123301 + F 100 -8.2 -5.36441 | opp_overlap 1123275 AGGAATGGAGTAAAA TACACATTTATA AAT TATATATGTGTA TTTTTTATATGAAAA CD0956 1123344 - 1123784 + | phage protein CD0956A 1123784 - 1123978 + | phage protein TERM 1092 1124229 - 1124213 - g 76 -5.1 -5.0925 | overlap 1124222 TTCTAAAAGTAAAAA GCCAC TCAACTC GTGGC AAGAGTAAAAGTGGC CD0956B 1124125 - 1124286 + | hypothetical protein TERM 1093 1124410 - 1124398 - f 80 -3.5 -5.84011 | AATAAAAAATAAAAA TTTTT ATT AAAAA ATTGAAAACTTGATT TERM 1094 1125526 - 1125566 + F 71 -8.6 -3.03441 | gap 1, opp_overlap 1125526, overlap 1125528 1125532 AGAATAAATAATATA GATAAAGCACTTGGATATT GTAT AGT-TTCAAGTGCTTTGTC TGTTAAAAAATGGTA TERM 1095 1125838 - 1125857 + F 88 -6.5 -5.52384 | opp_overlap 1125832 1125838 AAAATAATTCAAAAA CACTTAC AAATGA GTAAGTG TTTTTTTAATGAAAG TERM 1096 1125857 - 1125838 - f 78 -6.5 -4.85195 | opp_overlap 1125838, overlap 1125832 AAAATAATTCAAAAA CACTTAC AAATGA GTAAGTG TTTTTTTAATGAAAG CD0957 1125950 - 1126510 + | putative phage lipoprotein TERM 1097 1127026 - 1127004 - g 79 -7.8 -4.34402 | TTTGGCATAGGAAAA GCTATAACAG GAG CTACTATAGC AGGAGGCATTGGTCT CD0958 1126554 - 1127123 + | hypothetical protein TERM 1098 1127139 - 1127156 + F 83 -6.3 -5.36441 | opp_overlap 1127134 1127139 ATACTAAAAATAAAA CACTTAC TTAG GTAGGTG TTTTTTATGTGAAAA TERM 1099 1127156 - 1127139 - f 72 -4.1 -5.32396 | opp_overlap 1127139, overlap 1127134 ATACTAAAAATAAAA CACTTAC TTAG GTAGGTG TTTTTTATGTGAAAA CD0959 1127194 - 1129545 + | putative phage tail tape measure protein CD0960 1129561 - 1130250 + | putative phage cell wall hydrolase TERM 1100 1131096 - 1131113 + G 76 -2.7 -5.58209 | opp_overlap 1131096 ATATTAGAGTAAGAG CAGGT TGTTTAGT ACCTG TTTTTTTAGATTTAG TERM 1101 1131314 - 1131295 - g 74 -2.1 -5.52079 | AGATGAAAAGAAAAA TGGTCCT GCACAA AGTACCA CAAGTAAAGAAGACA TERM 1102 1131363 - 1131347 - g 70 -5.3 -4.60949 | overlap 1131356 GATATGATAAATAAA TTAAATA AAG TATTTAA AAATAAGTTATCAAA CD0961 1130243 - 1132213 + | putative phage cell wall hydrolase CD0962 1132227 - 1132487 + | phage protein TERM 1103 1132607 - 1132597 - g 72 -4 -5.14985 | opp_overlap 1132597, overlap 1132589 TTAAATATAGAAAAA TCTA AGA TAGA TGGTATTTGTGATGA CD0963 1132492 - 1132911 + | phage protein CD0964 1132912 - 1133961 + | phage protein CD0965 1133954 - 1134571 + | phage protein CD0966 1134583 - 1135386 + | putative phage tail fiber protein TERM 1104 1136175 - 1136131 - g 74 -9.5 -2.8055 | opp_overlap 1136129 1136131, overlap 1136128 1136126 1136135 CAGGTGATAATACTA GTAATGCTCATGGTTATGCTA AAA TAACATTACTACAAGCATTAC CATTTTTGAACATAT CD0967 1135395 - 1137101 + | hypothetical protein CD0968 1137118 - 1137411 + | hypothetical protein CD0969 1137411 - 1137593 + | hypothetical protein TERM 1105 1137597 - 1137579 - f 72 -8.2 -3.24825 | opp_overlap 1137579, overlap 1137577 1137582 GTAGTGGAAGGAACA GAACCTAC AAA ATAGGTTC TTTTTTAATATCAAA TERM 1106 1137579 - 1137597 + F 93 -7.5 -5.21709 | opp_overlap 1137579 1137577 1137582 GTAGTGGAAGGAACA GAACCTA CAAAA TAGGTTC TTTTTTAATATCAAA CD0970 1137628 - 1137858 + | hypothetical protein TERM 1107 1137905 - 1137932 + G 74 -7 -4.27117 | opp_overlap 1137905 ATAAGTTTTATACCA GAGCAGTTACTG ATTT TAGTTGCTGCTC TTTATGTTATAGGAG CD0971 1137878 - 1138138 + | putative phage membrane protein TERM 1108 1138772 - 1138760 - g 82 -6.3 -5.29742 | AGAGAAAAAAAGAAA GTTAC TTA GTAAC AGATATAAAAGACTA CD0972 1138135 - 1138950 + | phage endolysin CD0973 1138967 - 1139263 + | hypothetical protein TERM 1109 1139278 - 1139249 - f 79 -10.1 -2.74597 | opp_overlap 1139249 1139252, overlap 1139252 TTGATAGATAGATTA GAAGGTAGCAACT AGTT AGTTGTTACCTCC TTTTTTACACCTCAA TERM 1110 1139249 - 1139278 + F 100 -10.1 -5.03314 | opp_overlap 1139249 1139252, overlap 1139252 TTGATAGATAGATTA GAAGGTAGCAACT AGTT AGTTGTTACCTCC TTTTTTACACCTCAA TERM 1111 1139275 - 1139252 - f 75 -8.2 -3.51637 | opp_overlap 1139249 1139252, overlap 1139249 ATAGATAGATTAGAA GGTAGCAACT AGTT AGTTGTTACC TCCTTTTTTACACCT TERM 1112 1139252 - 1139275 + F 90 -10.4 -3.38056 | opp_overlap 1139252 1139249, overlap 1139249 ATAGATAGATTAGAA GGTAGCAACT AGTT AGTTGTTACC TCCTTTTTTACACCT CD0974 1139373 - 1139582 + | hypothetical protein CD0975 1139776 - 1140372 + | hypothetical protein CD0976 1140390 - 1140821 + | hypothetical protein TERM 1113 1141024 - 1140996 - g 75 -4.8 -5.07567 | opp_overlap 1141002 1141004 GGATATTGTAAAAAA TAATTTTAGATT TGAGG AATCTATAATTA AAGATAAGAACTATA CD0977 1140823 - 1141527 + | hypothetical protein TERM 1114 1141562 - 1141586 + F 75 -3.6 -5.49809 | opp_overlap 1141556 1141564 1141567, overlap 1141556 1141564 ATTAATAGATACTAA AAGTACTCTT TTTGT AAGAGTGCTA TTTTTTTGAAATTTA TERM 1115 1141564 - 1141584 + F 70 -6.2 -4.36993 | opp_overlap 1141556 1141564 1141567, overlap 1141556 1141562 TAATAGATACTAAAA GTACTCTT TTTGT AAGAGTGC TATTTTTTTGAAATT TERM 1116 1141747 - 1141769 + F 100 -9.2 -5.48163 | opp_overlap 1141747 ACATTATTATATAGA GCATTCTTCA TTA TGGAGAGTGC TTTTTTCATTTCTTT TERM 1117 1142251 - 1142268 + G 72 -6.3 -4.24887 | TTACTAGGAGTGTTA GCTAGTT TAAC AGCTAGC TTTATTACATATATT TERM 1118 1142313 - 1142303 - g 83 -6.8 -5.1417 | opp_overlap 1142303, overlap 1142304 1142305 CCAGAAAAGTAAAAA GCCA CTC TGGC AGGAGTGACTTTGAG CD0977A 1142224 - 1142367 + | hypothetical protein TERM 1119 1142380 - 1142413 + F 100 -5.4 -6.20267 | TAATATTTAGTTAAT GAAACTTCACTCTA GGCTAA TAGATTGTAGTTTC TTTTTTTGTTTTTGA TERM 1120 1142573 - 1142552 - f 76 -6 -4.86033 | AAACTTTCATAAAAA CAAAAAGA ACAATA TCTTTTTG GCAACTGGCTGGCAT CD0978 1142981 - 1143262 + | putative phage regulatory protein CD0979 1143302 - 1143688 + | putative phage regulatory protein TERM 1121 1143702 - 1143724 + F 81 -7.1 -4.87665 | gap 1, opp_overlap 1143702 AAGAATATGCCAAAA GGTAGC-ACT CAAT AGTAGCTACC TTTTTGTGGATAAAG TERM 1122 1143724 - 1143702 - f 75 -7.1 -4.21314 | gap 1, opp_overlap 1143702 AAGAATATGCCAAAA GGTAGC-ACT CAAT AGTAGCTACC TTTTTGTGGATAAAG TERM 1123 1144498 - 1144464 - f 82 -10.2 -3.06087 | opp_overlap 1144464 1144458, overlap 1144469 AATATAGTTTTAATA TTTAAGGAGACAGATT ATA ATTTTGTCTCCTTAAA TTATGCTTTAATTTG TERM 1124 1144464 - 1144498 + F 95 -12.4 -3.66643 | opp_overlap 1144464 1144469, overlap 1144458 AATATAGTTTTAATA TTTAAGGAGACAGATT ATA ATTTTGTCTCCTTAAA TTATGCTTTAATTTG CD0981 1144782 - 1146020 + | hypothetical protein TERM 1125 1146633 - 1146623 - g 72 -4 -5.08015 | AACGTAAAAAAGAAA TAGA AAC TCTA AGAGATGATGCAGTT CD0982 1146049 - 1146936 + | phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase CD0983 1146970 - 1147599 + | putative hydrolase CD0984 1147604 - 1148068 + | hypothetical protein TERM 1126 1148100 - 1148066 - f 77 -8.8 -3.37198 | opp_overlap 1148071, overlap 1148071 TCTTTACATATAATA TAAAACTATCTAAGTA ATA TACTTGGATAGTTTTT TTATGAGTATGTGTG TERM 1127 1148071 - 1148095 + F 100 -10.9 -5.65177 | opp_overlap 1148066 1148071 ACATATAATATAAAA CTATCTAAGTA ATA TACTTGGATAG TTTTTTTATGAGTAT TERM 1128 1148095 - 1148071 - f 93 -8.7 -4.77867 | opp_overlap 1148071, overlap 1148066 ACATATAATATAAAA CTATCTAAGTA ATA TACTTGGATAG TTTTTTTATGAGTAT TERM 1129 1149011 - 1149001 - g 70 -4 -4.94109 | CAAAATAAAAAAGAA GTAT ATG ATAC CAAAAGCAAGTATCA CD0985 1148318 - 1149685 + | putative drug/sodium antiporter TERM 1130 1150414 - 1150428 + G 72 -8.6 -3.01924 | overlap 1150416 AAAATAGACTTGTAG CATCTC ATA GAGATG TATTACAAGAGCGTA CD0986 1149885 - 1151159 + | putative 30S ribosomal protein S1 CD0987 1151277 - 1151996 + | putative hydrolase TERM 1131 1152355 - 1152343 - g 73 -3.5 -5.22794 | AGAAGTAGTAAAAAA TATAT TAA ATATA TACACTAACGAATCT CD0988 1152017 - 1152463 + | hypothetical protein TERM 1132 1152873 - 1152845 - f 100 -13.3 -4.26076 | opp_overlap 1152845 GTACCGCGAGCAAAA CCTCGTCTCTAAT TTT ATTAGAGATGAGG TTTTTTTTATTCTAA TERM 1133 1152845 - 1152873 + F 100 -15.5 -6.17268 | opp_overlap 1152845 GTACCGCGAGCAAAA CCTCGTCTCTAAT TTT ATTAGAGATGAGG TTTTTTTTATTCTAA TERM 1134 1153360 - 1153386 + GF 71 -4.5 -4.81551 | TACATTTATATAACT CTACATCTGTT CTTCA AAGAGATGTGG TTTTTAATATGAGTA leuA 1152981 - 1154723 + | 2-isopropylmalate synthase TERM 1135 1155366 - 1155354 - gf 82 -6.3 -5.19212 | AGCAGGAGCAAAAAA TGGAA TTT TTCCA GTAGACGATAAGACT leuC 1154680 - 1155957 + | 3-isopropylmalate dehydratase large subunit leuD 1155972 - 1156463 + | 3-isopropylmalate dehydratase small subunit TERM 1136 1156743 - 1156729 - g 100 -10 -4.57474 | opp_overlap 1156729 GTAAGGGAGATAAAA GACCAG AGT CTGGTC TTTTAAAATTAAGAG TERM 1137 1156729 - 1156743 + G 91 -10 -4.19238 | opp_overlap 1156729 GTAAGGGAGATAAAA GACCAG AGT CTGGTC TTTTAAAATTAAGAG leuB 1156470 - 1157540 + | 3-isopropylmalate dehydrogenase CD0993 1157903 - 1158418 + | putative thioesterase TERM 1138 1158522 - 1158510 - f 72 -4.9 -5.05037 | CAAGATAAAAATAAA TTAGT TAT ACTAA AAAGATTTATCGTAA CD0994 1158791 - 1159867 + | putative aminotransferase serA 1160107 - 1161048 + | putative D-3-phosphoglycerate dehydrogenase CD0996 1161080 - 1162330 + | hypothetical protein TERM 1139 1162336 - 1162374 + F 100 -14.8 -5.63103 | opp_overlap 1162339, overlap 1162339 AAATGAATAATTAAT AAAGGGCTAAAAAGTGCA CAA TTCACTTTTTAGCCCTTG TTTTTTTGATTGAAA TERM 1140 1162339 - 1162371 + F 100 -16.5 -4.88485 | opp_overlap 1162339, overlap 1162336 TGAATAATTAATAAA GGGCTAAAAAGTGCA CAA TTCACTTTTTAGCCC TTGTTTTTTTGATTG TERM 1141 1162371 - 1162339 - f 100 -16.5 -4.39877 | opp_overlap 1162336 1162339 TGAATAATTAATAAA GGGCTAAAAAGTGCA CAA TTCACTTTTTAGCCC TTGTTTTTTTGATTG TERM 1142 1162678 - 1162623 - f 100 -16.4 -3.58536 | gap 1, opp_overlap 1162630 1162632 1162644, overlap 1162627 1162644 AAAGTGATTTTGAAA TTTA-TATTTTATTTTTATAAATATAA TTA TTATATTTATAAAAATAAAATAGTAAA AGGATATTATAATAT TERM 1143 1162673 - 1162627 - f 100 -18.8 -2.64803 | opp_overlap 1162630 1162632 1162644, overlap 1162623 1162644 TGATTTTGAAATTTA TATTTTATTTTTATAAATATAA TTA TTATATTTATAAAAATAAAATA GTAAAAGGATATTAT TERM 1144 1163693 - 1163719 + G 75 -4.5 -5.06414 | overlap 1163695 ATGAGTTATTAGGAT TATCTGCATTT GATGA AAAAGCAGATG TTTTTGTTGCAAAGA TERM 1145 1166451 - 1166438 - g 83 -2.4 -5.84381 | TTATCAATAAAAAAA TGCT TGAGTC AGCA CCAAACACTCATGTA CD0997 1163143 - 1166697 + | putative signaling protein TERM 1146 1166861 - 1166849 - f 73 -3.5 -5.60993 | opp_overlap 1166849 TTTTGTATAAAAAAA TATTT GTT AAATA TATATTGAGCAGGTG CD0998 1166882 - 1168816 + | hypothetical protein TERM 1147 1169501 - 1169511 + GF 71 -6.8 -3.88498 | ATTGTTCCAGAACCT GCAC TTA GTGC TTTGATGTCTAAAAA CD0999 1168922 - 1169917 + | ABC transporter, substrate-binding lipoprotein TERM 1148 1169949 - 1169975 + GF 73 -6 -4.52873 | gap 1, opp_overlap 1169949 1169948 1169951, overlap 1169948 TTTATAGATAAAATG GAGG-TAACAC TTTCTT GTGTTATCCTC TTATTTTTATGGCAA CD1000 1169889 - 1170674 + | ABC transporter, permease protein CD1001 1170662 - 1171360 + | ABC transporter, ATP-binding protein CD1002 1171483 - 1171956 + | putative regulatory protein TERM 1149 1172302 - 1172290 - g 70 -3.5 -5.055 | opp_overlap 1172290 TGAAGTTGGAAAAAA TATAT TGA ATATA TTAGTTGAAAATGCT TERM 1150 1172365 - 1172338 - g 83 -2.1 -5.96894 | overlap 1172340 AGCTAAAGAAAAAAA TATACCAATAT GCCAAG ATACTGGTATG GCTGTATTTTTTGTT TERM 1151 1172775 - 1172757 - g 70 -9 -2.60992 | overlap 1172756 1172754 AATGTGCTCAAATAG CTAAAAAG GCA CTTTTTAG AGAACTAGGTGAATT fumA 1172153 - 1172992 + | fumarate hydratase TERM 1152 1173269 - 1173285 + G 76 -9.5 -3.16944 | opp_overlap 1173269, overlap 1173267 GATGATTTGACTATA CCTCTTT TAG AAAGAGG TCTTAGATTGATGAT TERM 1153 1173285 - 1173269 - g 74 -9.5 -2.80113 | opp_overlap 1173267 1173269 GATGATTTGACTATA CCTCTTT TAG AAAGAGG TCTTAGATTGATGAT fumB 1173005 - 1173553 + | putative fumarate hydratase, subunit B TERM 1154 1174472 - 1174458 - g 74 -8.6 -3.30619 | AAGTATGTCTGAGAA GCCAAT AAT ATTGGC AATGGCAAATCCTAC CD1005 1173616 - 1174800 + | NAD-dependent malic enzyme CD1006 1175092 - 1175481 + | acetyltransferase TERM 1155 1175522 - 1175534 + F 70 -2.7 -5.52023 | AGTACAATATTTTAG TGGAA TCA TTTCA TTTTTTATTACTAAT TERM 1156 1175543 - 1175574 + F 90 -10.4 -3.37531 | opp_overlap 1175549 CATTTCATTTTTTAT TACTAATATGACAT AAAC ATGTCATATTAGCA TTGATATACTTTTAA CD1007 1175631 - 1175894 + | hypothetical protein TERM 1157 1175947 - 1175976 + T 95 -9.3 -4.78572 | opp_overlap 1175947 1175948, overlap 1175949 TGGTGTTGAGAATAA GGGGTGGTGTGCT TTAT AGCATACCACCTG TTTTGTTACTTGGAG TERM 1158 1175949 - 1175974 + T 100 -14.1 -4.00694 | opp_overlap 1175948 1175947, overlap 1175947 GTGTTGAGAATAAGG GGTGGTGTGCT TTAT AGCATACCACC TGTTTTGTTACTTGG CD1008 1176865 - 1176023 - | hypothetical protein TERM 1159 1177140 - 1177111 - H 95 -10.9 -3.60151 | overlap 1177112 TCTTTTAAAGTATAA TTGGTATATACCA AAAT TGGTATATACCAT ATCGAAAAGTGGTGA TERM 1160 1177139 - 1177112 - H 100 -14.4 -2.75769 | overlap 1177111 CTTTTAAAGTATAAT TGGTATATACCA AAAT TGGTATATACCA TATCGAAAAGTGGTG CD1009 1177160 - 1177894 + | GntR family transcriptional regulator nagA 1177895 - 1179037 + | N-acetylglucosamine-6-phosphate deacetylase TERM 1161 1179749 - 1179763 + G 74 -7.2 -3.88787 | AAGAAAAAGCTGATG CAGTAT ATA ATACTG TTTATGGAGATATAA glmD 1179136 - 1179885 + | glucosamine-6-phosphate deaminase TERM 1162 1179912 - 1179951 + T 100 -11.1 -5.34381 | opp_overlap 1179912 AGTTTAAGTAAAAAA TAGCTATCATTGAGTAA TCAAAT TTATTTAATGATAGCTA TTTTTATTTAAATTT TERM 1163 1179951 - 1179912 - T 87 -6.7 -5.27477 | opp_overlap 1179912 AGTTTAAGTAAAAAA TAGCTATCATTGAGTAA TCAAAT TTATTTAATGATAGCTA TTTTTATTTAAATTT CD1012 1180499 - 1180017 - | hypothetical protein TERM 1164 1180914 - 1180901 - H 72 -3.9 -5.28755 | opp_overlap 1180901 AAATATAGTAAAAAA TAAGA TTTA TCTTA TCTATTGGGATTTAA CD1013 1180992 - 1181696 + | two-component system response regulator CD1014 1181794 - 1183185 + | two-component system sensor histidine kinase TERM 1165 1183776 - 1183797 + G 100 -8.9 -5.14645 | TATAAGAGTATTGGC GACAATTTT ATCT AAAATTGTC TTTTTGTTGACTTGT CD1015 1183390 - 1185003 + | putative signaling protein TERM 1166 1185124 - 1185163 + T 100 -13.2 -3.87815 | opp_overlap 1185124 ATTAACATGAGCAAA GGTGTAAGTAAATTTATA TTAG TTTAAGTTTACTTACACC TTTATAAAAATACAA TERM 1167 1185163 - 1185124 - T 100 -11 -3.8505 | opp_overlap 1185124 ATTAACATGAGCAAA GGTGTAAGTAAATTTATA TTAG TTTAAGTTTACTTACACC TTTATAAAAATACAA CD1016 1186196 - 1185366 - | MerR family transcriptional regulator TERM 1168 1186768 - 1186778 + G 74 -5.4 -4.90266 | TAATGTTTTTATTCA TGCT TTC AGCA TTTTTAGTTGGTAAA CD1017 1186269 - 1187996 + | putative ABC transporter, permease/ATP-binding protein CD1018 1188033 - 1189895 + | putative ABC transporter, permease/ATP-binding protein TERM 1169 1189957 - 1189996 + F 100 -11.1 -5.72622 | gap 1, opp_overlap 1189957 TATAGTAACATGTAA GGTTATATGGAATAAGAG TATTT CTCT-ATTTCATATAACC TTTTTTATTTATCAA TERM 1170 1189996 - 1189957 - f 75 -8.9 -3.21062 | gap 1, opp_overlap 1189957 TATAGTAACATGTAA GGTTATATGGAATAAGAG TATTT CTCT-ATTTCATATAACC TTTTTTATTTATCAA CD1019 1190228 - 1190917 + | hypothetical protein CD1020 1191022 - 1191708 + | hypothetical protein TERM 1171 1192545 - 1192528 - g 77 -8.5 -3.74251 | TACAGCTTTATTAAA CCTTGAT AGCT ATCAAGG GAGTTTTGCCCATAA CD1021 1191725 - 1193632 + | hypothetical protein TERM 1172 1193661 - 1193692 + F 72 -3.9 -5.41143 | overlap 1193688 1193691 TATAAATAATTTTAA TACTGTTAAGT CTAAATATTT ACTTAGCAGTA TTTTTTTAGAAAATA TERM 1173 1193793 - 1193824 + F 90 -6.8 -5.75822 | opp_overlap 1193785 AAAGTAATAAAAAAA CTGTTTAAGTATAA TAAC TTATATTTAGGCAG TTTTTTTCATTTATA CD1022 1194085 - 1194774 + | hypothetical protein TERM 1174 1194870 - 1194904 + F 100 -10.2 -5.80003 | opp_overlap 1194881 ATTAAAATATGAGGA TTGCTAGAACACTATA AAA TATAGATTTCTAGCAA TTTTTTATTTGTTCA TERM 1175 1195666 - 1195635 - g 74 -3.3 -5.46706 | AGGCGAAAAGAAAAA TAAAGTAAAAA AAGGAGAGAG TTTTTACTTTA GACCGAAAGCAAATC CD1023 1195210 - 1195749 + | putative transcriptional regulator potA 1195768 - 1196811 + | spermidine/putrescine ABC transporter,ATP-binding protein potB 1196813 - 1197649 + | spermidine/putrescine ABC transporter, permease protein potC 1197700 - 1198428 + | putative spermidine/putrescine ABC transporter,permease protein TERM 1176 1198912 - 1198894 - g 81 -10.4 -3.05343 | overlap 1198896 TGGATAGCTGGAATA TACTTTGG AAT CCAAAGTA TAAGGGAAATATAAT TERM 1177 1198910 - 1198896 - g 73 -8.6 -3.08371 | overlap 1198894 GATAGCTGGAATATA CTTTGG AAT CCAAAG TATAAGGGAAATATA potD 1198428 - 1199480 + | spermidine/putrescine ABC transporter,substrate-binding lipoprotein TERM 1178 1199522 - 1199572 + F 84 -5.1 -5.67283 | gap 1, opp_overlap 1199522, overlap 1199537 TTAATAAATACTTAA TAAAACTGTTC-TTTTTTAGAAAA TTTA TTTTCTAATTATTGAACAGTTTTA TTTTTTGTTTAAGTT CD1028 1199710 - 1200558 + | putative signaling protein CD1029 1200530 - 1202212 + | putative cell wall anchored protein TERM 1179 1203043 - 1203002 - g 71 -9 -2.8001 | opp_overlap 1203027, overlap 1203004 1203008 1203025 ATAAGTTTTAGGATA TATAAATTGGGATACAAG ATAAAG CTTGTACCACAATCTATA ACATGGGAACAAGAG CD1030 1202261 - 1203517 + | putative glycosyl transferase CD1031 1203540 - 1205621 + | putative cell wall anchored protein CD1032 1205658 - 1206743 + | hypothetical protein mnaA 1206797 - 1207921 + | UDP-N-acetylglucosamine 2-epimerase TERM 1180 1208391 - 1208373 - g 71 -3.2 -5.1925 | overlap 1208375 GTATAAGGTAAAAAA GTTTAATA AAG TATTAAGC GAATTGAAATTTGAC CD1034 1207999 - 1208973 + | putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase TERM 1181 1209367 - 1209352 - f 70 -7.6 -3.41125 | TGTACACACGGATAA CATACC GAAA GGTATG CTAATACGGGATAAT TERM 1182 1210737 - 1210781 + F 75 -8.2 -3.53091 | gap 1, opp_overlap 1210768, overlap 1210736 GGAGAATTACCTACT GT-TTAATTTTGAGGGTTCGT TTTT ACGAATACTCAAAATTAGCAC TTTAAGCAACGGGAT TERM 1183 1211398 - 1211377 - f 91 -10.3 -3.62096 | GCGGATTAGCCCAAA CCAATAAAG TTTT CTTTATTGG GGTTGAGGACATACC TERM 1184 1211563 - 1211548 - f 81 -10.4 -2.71011 | overlap 1211535 ACCCTGTGGGAAGCA GGAGGG ACCA CCCTCC AAGGCTAAATACTAC TERM 1185 1211636 - 1211625 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 1186 1214042 - 1214065 + F 80 -9.8 -2.82923 | overlap 1214041 1214059 AGGATATATATGTAG TTTTTAGAGT GCTA ACTCTAAAAA ATTAGTTTTACTAAT TERM 1187 1214079 - 1214067 - f 74 -4.9 -5.09426 | opp_overlap 1214059 1214067 GCTAACTCTAAAAAA TTAGT TTT ACTAA TTTATAAAAATTTAA TERM 1188 1214397 - 1214419 + F 100 -8 -6.28401 | opp_overlap 1214397 1214402 ATATAGTGAAGATAA TTAAATATAT TCA ATATATTTAA TTTTTTTATTTTTTG TERM 1189 1214419 - 1214397 - f 73 -8 -3.70848 | opp_overlap 1214397, overlap 1214402 ATATAGTGAAGATAA TTAAATATAT TCA ATATATTTAA TTTTTTTATTTTTTG CD1035 1214547 - 1216586 + | cell surface protein (putative N-acetylmuramoyl-L-alanine amidase) TERM 1190 1216922 - 1216944 + F 100 -5.8 -6.28401 | opp_overlap 1216922 ATATAGTATAGATAA TTAAATGTAT TAA ATATATTTAA TTTTTTTATTTTTTG TERM 1191 1219040 - 1219024 - g 70 -8.1 -3.1531 | opp_overlap 1219027, overlap 1219022 1219019 ATAATGAAAATGATA TGAGTTT AAT AAACTCA TCTGCAAAAGTAAAA CD1036 1217070 - 1219103 + | cell surface protein (putative N-acetylmuramoyl-L-alanine amidase) TERM 1192 1219242 - 1219197 - f 70 -7.8 -3.39449 | opp_overlap 1219197 GTGTATCAATAGTAA GACTGTATGTACATTTGCAC ATGTGA ATGCAAGTATATATACAGTC TTTTTTTGTAGTTAA TERM 1193 1219197 - 1219242 + F 100 -9.3 -5.71983 | opp_overlap 1219197 GTGTATCAATAGTAA GACTGTATGTACATTTGCA CATGTGAA TGCAAGTATATATACAGTC TTTTTTTGTAGTTAA CD1037 1219345 - 1221258 + | hypothetical protein TERM 1194 1221322 - 1221304 - g 73 -8.2 -3.51598 | AATAAATTACGATAA TGGTACTA TGG CAGTACCA GCAGTACCAGGTGCT CD1038 1221251 - 1223470 + | putative helicase TERM 1195 1223877 - 1223852 - g 86 -3.3 -5.9362 | opp_overlap 1223852 GAAAATATAAAAAAA GTTGTTCCTAT TGAA AAAGGAAAAAC GTATTTGCCAGAATA CD1039 1223579 - 1224409 + | hypothetical protein TERM 1196 1226841 - 1226819 - g 71 -2.1 -5.46698 | gap 1 TCTAAAAGCAAAAAA GCGTAAA-GA GTAT TCATTTACAC CACCAGATTTAGGAA TERM 1197 1227106 - 1227093 - g 78 -6.7 -4.56436 | CAGCAAATAAAACAA GGTTC ATTT GAACC AATAGATTATGAAGT TERM 1198 1227590 - 1227557 - g 70 -3.9 -5.04601 | overlap 1227558 TGGAGAAAGGAAAAA CTCTTTAGTAATACC AGTA GGTCTTACTAAGGAT GGAAATGTAGGTAAA addB 1224399 - 1227866 + | ATP-dependent nuclease subunit B TERM 1199 1229270 - 1229260 - g 83 -6.8 -5.01535 | CTATAATGATAAAAA GGGA AGC TCCC ATAGAAAAATAATGC addA 1227866 - 1231693 + | ATP-dependent nuclease subunit A TERM 1200 1231763 - 1231791 + G 72 -8.2 -3.36492 | gap 1, opp_overlap 1231760 1231757 ATTCATACATCAGAT TGGCAT-CTAGGG AAGT CCCTAGAAGGCCA TTCTAGAATTGAGGA TERM 1201 1232802 - 1232786 - g 74 -8.1 -3.61015 | overlap 1232781 1232784 AAACCAATAATAACA TCTTGTT ATG AACAAGA AAGTGTAGATATAAA sbcD 1231739 - 1232950 + | nuclease subunit D TERM 1202 1234725 - 1234707 - g 72 -6.8 -4.07568 | overlap 1234709 GTTTGTGGGTCAAAA CATCATGA AAA TCATGATA TAACTAAGTATGATG TERM 1203 1236025 - 1236003 - g 83 -7.9 -4.59982 | overlap 1236015 GTACAAGGAAATAAA TTTGTAGAA TATGT TTCTACAAA CCAATTAAAATATAT sbcC 1232937 - 1236464 + | exonuclease subunit C TERM 1204 1236612 - 1236628 + G 85 -4.5 -5.56568 | GTTGGAATCGCCCAA TAATTTG ATT CAGATTA TTTTTTTAATAGTAT CD1044 1236595 - 1237848 + | putative modulator of ions transport TERM 1205 1237924 - 1237867 - f 91 -10.3 -3.56366 | opp_overlap 1237874, overlap 1237877 1237886 AATAATGTTCTTAAA TTTATTAGAAGTGTATAAATATAAAAG ATAT CTTTTATATTTATACACTTCTTTTTAT TTTGTATTCAAATAA TERM 1206 1237874 - 1237917 + F 100 -21.6 -5.60556 | opp_overlap 1237867 1237877 1237886 TTCTTAAATTTATTA GAAGTGTATAAATATAAAAG ATAT CTTTTATATTTATACACTTC TTTTTATTTTGTATT TERM 1207 1237914 - 1237877 - f 100 -17.5 -3.45776 | opp_overlap 1237874, overlap 1237867 1237886 TTAAATTTATTAGAA GTGTATAAATATAAAAG ATAT CTTTTATATTTATACAC TTCTTTTTATTTTGT TERM 1208 1238118 - 1238138 + G 74 -9.1 -2.81256 | overlap 1238121 TAGCTCCATTTTTTC TAGGTGCTA TAA TAGCACTTA TGATTAATCCTATAT TERM 1209 1238121 - 1238135 + G 77 -8.6 -3.54743 | overlap 1238118 CTCCATTTTTTCTAG GTGCTA TAA TAGCAC TTATGATTAATCCTA CD1045 1237997 - 1239049 + | hypothetical protein TERM 1210 1239104 - 1239083 - f 70 -3.9 -5.26119 | TTTTTAAAAATAAAA TTTTATTCA CAGG TAAATAAAA AAATATTAATCTTAT pepT 1239139 - 1240365 + | peptidase T TERM 1211 1240477 - 1240501 + F 80 -6.7 -4.99134 | opp_overlap 1240483 GTATAGCTATTTTTG TAATTATTTTT ATA AAAGATAATTA TTTTTAGTTTAGGGT CD1047 1240572 - 1241624 + | cell surface protein TERM 1212 1241873 - 1241930 + T 100 -24.3 -3.09562 | gap 1, opp_overlap 1241871 1241873 1241891, overlap 1241874 1241891 AAAACAAGTAAACCA GATTCTATTTAATTAGAAGTTTAAGGTA TTG TA-CTTAAACTTCTAATTAAATAGAATC TGGTTTACTTGTTTT TERM 1213 1241930 - 1241873 - T 100 -24.3 -3.09562 | gap 1, opp_overlap 1241873 1241874 1241891, overlap 1241871 1241891 AAAACAAGTAAACCA GATTCTATTTAATTAGAAGTTTAAGGTA TTG TA-CTTAAACTTCTAATTAAATAGAATC TGGTTTACTTGTTTT CD1048 1242565 - 1241996 - | phosphodiesterase CD1049 1243390 - 1242590 - | putative inorganic polyphosphate/ATP-NAD kinase CD1050 1243525 - 1244385 + | ABC transporter, ATP-binding protein CD1051 1244382 - 1245071 + | putative ABC transporter, permease protein CD1052 1245123 - 1245665 + | hypothetical protein CD1053 1245744 - 1246211 + | putative regulatory protein TERM 1214 1246230 - 1246217 - f 72 -3.9 -5.43866 | GAATTGGTAAAAAAA TATAG TAAA CTATA GTAGGAATTAGTAAA TERM 1215 1246279 - 1246249 - f 100 -15.7 -5.2189 | opp_overlap 1246249 GGAATTAGTAAAAAA CTACCTCTGTATA CAATC TATACAGAGGTAG TTTTTTTGTGTAAAT TERM 1216 1246249 - 1246279 + F 100 -15.7 -5.72616 | opp_overlap 1246249 GGAATTAGTAAAAAA CTACCTCTGTATA CAATC TATACAGAGGTAG TTTTTTTGTGTAAAT TERM 1217 1246440 - 1246428 - f 70 -3.5 -5.42862 | ATATTGTTAAAAAAA TAATT AGA AATTA TTGAAAAATTATCCT bcd2 1246920 - 1248056 + | butyryl-CoA dehydrogenase etfB2 1248100 - 1248897 + | electron transfer flavoprotein beta-subunit etfA2 1248916 - 1249926 + | electron transfer flavoprotein alpha-subunit TERM 1218 1250686 - 1250656 - g 73 -9.3 -2.58253 | gap 1, overlap 1250652 ATAGAATCTAATTTA TTTGGTCTTT-GTT TTTC AACTAAAGACCAAA AAGAAGGAATGTCAG crt2 1249945 - 1250742 + | 3-hydroxybutyryl-CoA dehydratase TERM 1219 1250813 - 1250758 - f 100 -10.9 -4.90917 | opp_overlap 1250776, overlap 1250760 AAATCTAATTAAAAA TATATTTGCTGTTAACTAGATTAAA TAGTAT TTTAATCTAGTTAACAGAATATAAA TACTAAAATAACAGG TERM 1220 1250811 - 1250760 - f 100 -13.5 -4.06004 | opp_overlap 1250776, overlap 1250758 ATCTAATTAAAAATA TATTTGCTGTTAACTAGATTAAA TAGTAT TTTAATCTAGTTAACAGAATATA AATACTAAAATAACA TERM 1221 1251324 - 1251308 - g 70 -8.1 -3.08798 | AGTGGTCAGTTAACA TCAAAAG TTA CTTTTGA TACAGTATTTGAATT hbd 1250840 - 1251685 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 1222 1251729 - 1251715 - f 75 -5.8 -4.91429 | opp_overlap 1251715 AAAGTTTAAATAAAA TTGTTT AAA AAACAA TTTCGGATATATGAA TERM 1223 1251904 - 1251890 - g 74 -5 -4.94222 | overlap 1251893 AAGAAGCTATAAAAA GAGCTA ACA TAACTC CAGATATGATAGATG TERM 1224 1252676 - 1252666 - g 79 -5.4 -5.30155 | overlap 1252658 CCAGCAACTAAAAAA GCTT TAG AAGC TGCTAATATGACTAT thlA1 1251772 - 1252947 + | acetyl-CoA acetyltransferase TERM 1225 1253027 - 1252995 - f 100 -16.6 -3.22409 | opp_overlap 1252995, overlap 1252990 TAATTATGAATTTAA CCTGTAAGAATAAC AAATA GTTATTCTTACAGG TTTTTATAGTTAAAA TERM 1226 1252995 - 1253027 + F 100 -16.6 -4.98255 | opp_overlap 1252995 1252990 TAATTATGAATTTAA CCTGTAAGAATAAC AAATA GTTATTCTTACAGG TTTTTATAGTTAAAA CD1060 1253143 - 1254045 + | putative pseudouridylate synthase CD1061 1254050 - 1255063 + | hypothetical protein TERM 1227 1255088 - 1255060 - T 83 -7.7 -4.71828 | opp_overlap 1255064, overlap 1255061 1255064 ATTTTATGAAGAAAA GTAATTTATATAC TTA GTATATAAATTAA ATATAAGAGCGTGTA TERM 1228 1255087 - 1255061 - T 93 -11.2 -3.42374 | opp_overlap 1255064, overlap 1255060 1255064 TTTTATGAAGAAAAG TAATTTATATAC TTA GTATATAAATTA AATATAAGAGCGTGT TERM 1229 1255064 - 1255084 + T 72 -8.5 -3.12351 | opp_overlap 1255061 1255060 1255064 TATGAAGAAAAGTAA TTTATATAC TTA GTATATAAA TTAAATATAAGAGCG TERM 1230 1255084 - 1255064 - T 78 -8.5 -3.83868 | opp_overlap 1255064, overlap 1255061 1255060 TATGAAGAAAAGTAA TTTATATAC TTA GTATATAAA TTAAATATAAGAGCG TERM 1231 1255131 - 1255182 + T 75 -6.8 -4.40003 | opp_overlap 1255133 TAAATAAATGTAATC TAGTCTGTGCGAACTCTAATATAA TTTA TTATGTAGAAGTTTACACAGACTA TTTATATTTGTAGAC acpP 1255434 - 1255207 - | acyl carrier protein TERM 1232 1255856 - 1255835 - g 72 -4.5 -4.89729 | overlap 1255828 1255837 TAGAAAATTCAAAAA CATCCTTCT TGAT AGAAAGATA TAAGGAGTACAAAAT CD1063 1255606 - 1256031 + | hypothetical protein CD1063A 1256079 - 1256285 + | hypothetical protein TERM 1233 1256344 - 1256304 - f 91 -10.8 -3.80014 | gap 1, opp_overlap 1256306 1256343, overlap 1256306 1256313 ATATTGATTATTAAA TAGGTAAAACCAGTAACTT ATAC AAGTTA-TGGTTTTACCTT TTTTAGTTCAAATTA TERM 1234 1256342 - 1256306 - f 100 -13.4 -3.48292 | gap 1, opp_overlap 1256306, overlap 1256304 1256313 ATTGATTATTAAATA GGTAAAACCAGTAACTT ATAC AAGTTA-TGGTTTTACC TTTTTTAGTTCAAAT TERM 1235 1256306 - 1256342 + F 100 -13.4 -5.27477 | gap 1, opp_overlap 1256306 1256304 1256313 ATTGATTATTAAATA GGTAAAACCAGTAACTT ATAC AAGTTA-TGGTTTTACC TTTTTTAGTTCAAAT CD1063B 1256467 - 1256646 + | hypothetical protein CD1063C 1256680 - 1256880 + | hypothetical protein TERM 1236 1256940 - 1256892 - f 100 -16.5 -2.974 | opp_overlap 1256893 1256906, overlap 1256906 CTAATACTTAAATCA TTAGAATAAAAAAATGCTGGTAT TTT ATACCAGCATTTTTTTATTTTAT TTTTTAATATGATTT TERM 1237 1256893 - 1256939 + F 100 -22.2 -5.2422 | opp_overlap 1256892 1256906, overlap 1256906 TAATACTTAAATCAT TAGAATAAAAAAATGCTGGTAT TTT ATACCAGCATTTTTTTATTTTA TTTTTTAATATGATT TERM 1238 1256906 - 1256926 + F 100 -12.7 -6.17669 | opp_overlap 1256892 1256906, overlap 1256893 ATTAGAATAAAAAAA TGCTGGTAT TTT ATACCAGCA TTTTTTTATTTTATT TERM 1239 1256926 - 1256906 - f 100 -12.7 -5.89921 | opp_overlap 1256906 1256893, overlap 1256892 ATTAGAATAAAAAAA TGCTGGTAT TTT ATACCAGCA TTTTTTTATTTTATT ccpA 1257133 - 1258149 + | LacI family transcriptional regulator TERM 1240 1258200 - 1258152 - T 84 -5.1 -5.64328 | gap 4, opp_overlap 1258165, overlap 1258161 1258165 AAGAAAAAAATAAAA CTATTAAAATCAATCAGGTAGTGCC TAA GGCACTACCTGATT--TTTT-AT-G TCAATAATATCAAAT TERM 1241 1258195 - 1258161 - T 100 -14.4 -4.43571 | opp_overlap 1258165, overlap 1258152 1258165 ATAAAACTATTAAAA TCAATCAGGTAGTGCC TAA GGCACTACCTGATTTT TTATGTCAATAATAT TERM 1242 1258191 - 1258165 - T 100 -19.6 -3.73345 | opp_overlap 1258165, overlap 1258161 1258152 AACTATTAAAATCAA TCAGGTAGTGCC TAA GGCACTACCTGA TTTTTTATGTCAATA TERM 1243 1258165 - 1258191 + T 100 -19.6 -5.38047 | opp_overlap 1258165 1258161 1258152 AACTATTAAAATCAA TCAGGTAGTGCC TAA GGCACTACCTGA TTTTTTATGTCAATA CD1065 1258712 - 1258272 - | hypothetical protein CD1066 1258882 - 1259787 + | hypothetical protein TERM 1244 1260110 - 1260086 - f 100 -8.7 -5.60993 | opp_overlap 1260086 TTCGGGACAAAAAAA GTGCTACTATT TCA AATAGTAGTAC TTTTTTTATTAATAT TERM 1245 1260086 - 1260110 + F 100 -10.9 -5.85737 | opp_overlap 1260086 TTCGGGACAAAAAAA GTGCTACTATT TCA AATAGTAGTAC TTTTTTTATTAATAT CD1067 1260265 - 1261482 + | hypothetical protein TERM 1246 1261529 - 1261572 + T 78 -6.8 -4.87665 | gap 1, opp_overlap 1261530 1261534, overlap 1261530 1261530 AATAAAAATCATCTA AG-GAAGGCTACCAAAGTGTA TAA TTTACATTGGTAGCCTTCACG TTTTTATAACTAGCG TERM 1247 1261530 - 1261570 + T 81 -10.5 -2.70788 | opp_overlap 1261530 1261534, overlap 1261529 1261530 ATAAAAATCATCTAA GGAAGGCTACCAAAGTGTA TAA TTTACATTGGTAGCCTTCA CGTTTTTATAACTAG TERM 1248 1261530 - 1261571 + T 91 -10.3 -3.52117 | gap 1, opp_overlap 1261530 1261534, overlap 1261530 1261529 ATAAAAATCATCTAA G-GAAGGCTACCAAAGTGTA TAA TTTACATTGGTAGCCTTCAC GTTTTTATAACTAGC TERM 1249 1261570 - 1261530 - T 72 -8.4 -3.21827 | opp_overlap 1261530 1261530 1261529, overlap 1261534 ATAAAAATCATCTAA GGAAGGCTACCAAAGT GTATAATTT ACATTGGTAGCCTTCA CGTTTTTATAACTAG TERM 1250 1261566 - 1261534 - T 70 -7.8 -3.39432 | opp_overlap 1261530 1261530 1261529, overlap 1261530 AAATCATCTAAGGAA GGCTACCAAAGT GTATAATTT ACATTGGTAGCC TTCACGTTTTTATAA CD1068 1262913 - 1261582 - | putative polysaccharide biosynthesis/sporulation protein CD1069 1263749 - 1262955 - | putative phosphatase CD1070 1263850 - 1265304 + | putative aminotransferase CD1071 1265333 - 1265542 + | hypothetical protein CD1072 1265562 - 1266956 + | putative aminopeptidase 1 TERM 1251 1267298 - 1267286 - g 85 -2.7 -5.84432 | GACAACATAAAAAAA CAAAT AGC ATCTG GCATATATAAACCAG CD1073 1267223 - 1267948 + | GntR family transcriptional regulator CD1074 1267974 - 1268384 + | PTS system, IIA component TERM 1252 1268467 - 1268457 - g 74 -6.8 -4.26589 | ATGATACACTTAAAA GGAG ATA CTCC AGAAGATATCTTTGA CD1075 1268388 - 1269131 + | hypothetical protein CD1076 1269131 - 1269601 + | PTS system, IIB component CD1077 1269612 - 1270376 + | PTS system, IIC component CD1078 1270360 - 1271202 + | PTS system, IID component TERM 1253 1271235 - 1271212 - T 91 -5.2 -6.02919 | opp_overlap 1271212 GTATAAATAAAAAAA TCCCAAGTTC ATTT GAACGAGGGA TTTTTTGACTAAATT TERM 1254 1271212 - 1271235 + T 74 -5.2 -5.10497 | opp_overlap 1271212 GTATAAATAAAAAAA TCCCAAGTTC ATTT GAACGAGGGA TTTTTTGACTAAATT CD1079 1272267 - 1271362 - | LysR family transcriptional regulator TERM 1255 1272453 - 1272435 - H 73 -7.6 -3.73294 | opp_overlap 1272435 1272434 TAAAAATATCGTAAA TTGAATTT TCA AAATTCAA CTTTAAAGTGTTTTT CD1080 1272629 - 1273363 + | putative lipoprotein TERM 1256 1273385 - 1273422 + F 95 -7.1 -5.83226 | overlap 1273373 CTAAAGCATATGATG CTGTTTCAAGATAGAAG GAAA TTTCTAGCTGGGAACAG TTTTTTTATTAGATT TERM 1257 1273628 - 1273602 - g 72 -4.6 -4.87273 | AAGATGCCATAAAAA TTATTGAAAAAA ATG TTTTACCAATAA ACAGGGTCAAGATAG moeA 1273574 - 1274755 + | molybdopterin biosynthesis protein mobB 1274778 - 1275311 + | molybdopterin-guanine dinucleotide biosynthesis protein B CD1083 1275430 - 1275705 + | PTS system, IIB component TERM 1258 1275742 - 1275783 + F 70 -4 -5.23765 | TTAGTATTAAATATA GAGTTGTATCTTTATA AAATTTTAAA TATAGAGATATAGCTC TTTTTATGTTGTTTC TERM 1259 1277440 - 1277417 - g 71 -6.8 -3.91488 | opp_overlap 1277436 AATCTTTTTAAAGAA TCCTCCAATA ATAA TATTGGATGA GGCTACATCTGCTTT CD1084 1275960 - 1277660 + | ABC transporter, ATP-binding/permease protein TERM 1260 1278614 - 1278596 - g 71 -3.1 -5.17744 | ACAGATGAAGAAAAA GTTAAGG ATTTA CCTGAAC AAAAAAGCAGATTTA CD1085 1278023 - 1279210 + | hypothetical protein CD1086 1279246 - 1280433 + | putative peptidase TERM 1261 1280440 - 1280497 + F 87 -6.9 -5.30686 | gap 2, opp_overlap 1280447 1280457, overlap 1280457 AATAAATAATTTTAA TATACTATAAAGAAAAAGCAGAGACTA AGTTTA TA-TCTCTGCTTTTTTATTAT-GTATA TTTTTTATAAATATT TERM 1262 1280457 - 1280481 + F 75 -3.7 -5.62045 | gap 1, opp_overlap 1280447 1280457, overlap 1280440 TACTATAAAGAAAAA GCAGAGACTA AGTTTA TA-TCTCTGC TTTTTTATTATGTAT TERM 1263 1280481 - 1280457 - f 76 -4.4 -5.40464 | gap 1, opp_overlap 1280457 1280440, overlap 1280447 TACTATAAAGAAAAA GCAGAGAC-TA AGTT TATATCTCTGC TTTTTTATTATGTAT TERM 1264 1280732 - 1280746 + G 75 -5.8 -4.72272 | GTGTTATGATTTATG TTTCTA TGA TAGAAA TTTTTCCTAAAGCAC zupT 1280584 - 1281387 + | zinc transporter ZupT CD1088 1281482 - 1282042 + | hypothetical protein TERM 1265 1282044 - 1282097 + F 80 -9.4 -3.1739 | gap 1, opp_overlap 1282044 1282049, overlap 1282049 AAAAGTTTAAATAAA TAAAAGAAGGTGTCCTAAAATTATT TTTTT AAT-ATTTTAAGACATCTTCTTTTG TTAATAAAGTACTGT TERM 1266 1282097 - 1282044 - f 77 -7.2 -4.48743 | gap 1, opp_overlap 1282044 1282049, overlap 1282049 AAAAGTTTAAATAAA TAAAAGAAGGTGTCCTAAAATTATT TTTTT AAT-ATTTTAAGACATCTTCTTTTG TTAATAAAGTACTGT TERM 1267 1282049 - 1282092 + F 79 -7.1 -4.71828 | gap 1, opp_overlap 1282044 1282049, overlap 1282044 TTTAAATAAATAAAA GAAGGTGTCCTAAAATTATT TTTTT AAT-ATTTTAAGACATCTTC TTTTGTTAATAAAGT TERM 1268 1282092 - 1282049 - f 87 -7.1 -5.18866 | gap 1, opp_overlap 1282049 1282044, overlap 1282044 TTTAAATAAATAAAA GAAGGTGTCCTAAAATTATT TTTTT AAT-ATTTTAAGACATCTTC TTTTGTTAATAAAGT CD1089 1282293 - 1283006 + | two-component response regulator TERM 1269 1284375 - 1284410 + T 100 -10.4 -4.77036 | TCAAAAGTTCTTATA TGCCGGTATAGCCTAT TGTT ACAGGCTTTTCCGGCA TTTTTCGTCATGGAA int 1285700 - 1284507 - | integrase TERM 1270 1284673 - 1284699 + g 71 -5.8 -4.4836 | TGGCGTAAGGTGTGC GGTGTCATTACC TTT GGCAATGCTACC TTTTGCGTTTTGTTG TERM 1271 1285444 - 1285456 + g 70 -4.1 -4.89521 | TGCTTTGCGTAAAGC TGGCA GAC TGTCA TTTTCTTTCCGATAT TERM 1272 1285707 - 1285730 + r 72 -9 -2.59267 | gap 1, overlap 1285706 TTCCGACATCGTTAT GCTCCTTTCCA TAA TGGAAA-GAGC CTTGATATGCTTGAC xis 1285983 - 1285780 - | excisionase CD1092A 1286662 - 1286405 - | conjugative transposon protein CD1094 1287083 - 1286643 - | conjugative transposon protein TERM 1273 1286973 - 1286959 - G 70 -4.3 -4.87786 | opp_overlap 1286972 GCAAGGTCACAAAAA GAAAC TTCCC GTTTC CTGCGTCGCCGGATT TERM 1274 1287112 - 1287091 - R 72 -8.7 -2.75064 | opp_overlap 1287108 1287111, overlap 1287088 1287108 GGTTCCATGTAATCA CCTCCTTTC TGCC GAAAGGCGG GTAGTACCTCCCCTT TERM 1275 1287243 - 1287210 - R 100 -18.2 -4.24002 | overlap 1287202 CTGTAAAGTGCAAAA TGCGCCTGCCCGCA AAAAGG CGCGGACAGGCGCA AAGGAATAGTAAACA TERM 1276 1287471 - 1287443 - R 100 -13.9 -5.74122 | overlap 1287459 1287464 1287466 CAGTAGACAAAAAAA GCGGCGGCTCTAA AAA TCAAAGCCACCGC TTCAAAGGCGCGTGA CD1095 1288347 - 1287556 - | putative lantibiotic ABC transporter, permease protein CD1096 1289144 - 1288335 - | putative lantibiotic ABC transporter, permease protein TERM 1277 1288641 - 1288630 - G 74 -3 -5.4387 | ATAGAAAGTAAAAAA CTTT TGTT AAAG TAAATAATTAAAAAT CD1097 1290063 - 1289137 - | putative lantibiotic ABC transporter,ATP-binding protein TERM 1278 1290206 - 1290166 - R 79 -7.1 -4.57837 | gap 2, opp_overlap 1290169, overlap 1290169 1290174 1290198 ATATTGTCCCAAAAA TAATTAAGG--CTCCCGTC AAAAG GACGGGAGAACCTTAATTT GCTAAGGGAAAAAGC TERM 1279 1290203 - 1290169 - R 86 -8.8 -4.40561 | gap 2, opp_overlap 1290169, overlap 1290166 1290174 1290198 TTGTCCCAAAAATAA TTAAGG--CTCCCGTC AAAAG GACGGGAGAACCTTAA TTTGCTAAGGGAAAA TERM 1280 1290169 - 1290203 + r 79 -8.8 -3.72576 | gap 2, opp_overlap 1290169 1290166 1290174 1290198 TTGTCCCAAAAATAA TTAAGG--CTCCCGTC AAAAG GACGGGAGAACCTTAA TTTGCTAAGGGAAAA TERM 1281 1290196 - 1290174 - R 73 -9.1 -2.83836 | opp_overlap 1290169, overlap 1290169 1290166 CCAAAAATAATTAAG GCTCCCGTC AAAAG GACGGGAGA ACCTTAATTTGCTAA CD1098 1291117 - 1290200 - | two-component sensor histidine kinase CD1099 1291816 - 1291124 - | two-component response regulator CD1099A 1292030 - 1291809 - | hypothetical protein CD1100 1292159 - 1292512 + | putative conjugative transposon protein TERM 1282 1292546 - 1292571 + F 100 -9.1 -5.52079 | opp_overlap 1292546 ATATGATTTAGGAAG CGTTGTAATCT TTAC AGATTGCAGCG TTTTTCTTTTGCTCT CD1101 1292761 - 1293090 + | putative mobilization protein CD1102 1293051 - 1294400 + | putative mobilization protein CD1103 1294493 - 1294723 + | hypothetical protein CD1103A 1294745 - 1294924 + | hypothetical protein CD1104 1295107 - 1295526 + | hypothetical protein TERM 1283 1295537 - 1295578 + T 100 -15.8 -4.33417 | opp_overlap 1295537 TTTGAAGTTTTAAAA GCCGGGACGCAGACAGTC GGTAAA GACTATCCGCGCCCCGGC TTTCTTATGGGTACA TERM 1284 1295578 - 1295537 - T 100 -22.4 -4.14392 | opp_overlap 1295537 TTTGAAGTTTTAAAA GCCGGGACGCAGACAGTC GGTAAA GACTATCCGCGCCCCGGC TTTCTTATGGGTACA TERM 1285 1295676 - 1295692 + T 72 -3.6 -5.42259 | opp_overlap 1295676 TTTCACACCCGGAAA GCCCTG TAAAT CAAGGC TTTTTTTGCCCCTAC CD1104A 1296069 - 1295704 - | hypothetical protein TERM 1286 1296042 - 1296055 + g 81 -9.5 -3.54741 | CTTTCCGGCTTTGGG GCGGC GTAA GCCGC TTTAGCCCGGTCATA CD1104B 1296272 - 1296066 - | hypothetical protein CD1105 1300306 - 1296275 - | putative DNA primase TERM 1287 1297916 - 1297927 + g 75 -7.2 -4.12911 | TTTCTCATGGTACAT CGGG TCAA CCCG TTGTTTCTGCCTTTC TERM 1288 1298107 - 1298122 + g 83 -6.8 -5.06414 | CCGGCTGTCCGTCTT GCTCCT TTGC AGGGGC TTTTTCTTCGGGAAG TERM 1289 1300396 - 1300366 - R 100 -9.1 -4.99435 | gap 1, opp_overlap 1300366 CCCAACAAGCAAAAA TCCCCGCCGTTCTC GGTA GAGAA-AGCAGGGA TTTTACGGAAAAGGG CD1106 1302529 - 1300439 - | DNA topoisomerase TERM 1290 1300852 - 1300868 + g 89 -9.5 -4.21936 | overlap 1300855 CTGCCTTGCCTTTGG CAATCTG CGT CAGATTG TTTTCCCATTCTGCG TERM 1291 1301370 - 1301335 - G 72 -5.4 -4.70659 | gap 1 CGGCACACTCAAAAA CTGCCGTAACCGCTT CAAAGGT ATGCGG-TGCGGCAG TCGCCATAATCAGAC TERM 1292 1301432 - 1301385 - G 77 -9.8 -2.96274 | gap 1, opp_overlap 1301431, overlap 1301380 GTCGCCATAATCAGA CGCGCC-CCGGCAATGGTAAGGA TAT TCCTTTCGCTTTCCGGCAGCGCG GCAAGGTCGGTCTTT CD1106A 1302734 - 1302546 - | hypothetical protein TERM 1293 1302652 - 1302685 + g 76 -9.5 -3.08656 | opp_overlap 1302652 1302653 1302656, overlap 1302651 1302656 CAAGCCGGGGGATAA GGAACAGGCGGCG CATTATCA CGCCGCCCGTTCG GTTTCTGTATCATCA TERM 1294 1302685 - 1302652 - G 100 -13.1 -3.29461 | opp_overlap 1302652 1302651 1302656, overlap 1302653 1302656 CAAGCCGGGGGATAA GGAACAGGCGGCGCA TTAT CACGCCGCCCGTTCG GTTTCTGTATCATCA TERM 1295 1302684 - 1302653 - G 100 -16.6 -2.57463 | opp_overlap 1302652 1302651 1302656, overlap 1302652 1302656 AAGCCGGGGGATAAG GAACAGGCGGCGCA TTAT CACGCCGCCCGTTC GGTTTCTGTATCATC TERM 1296 1302681 - 1302656 - G 100 -12.5 -3.44146 | opp_overlap 1302652 1302651 1302656, overlap 1302653 1302652 CCGGGGGATAAGGAA CAGGCGGCGCA TTAT CACGCCGCCCG TTCGGTTTCTGTATC TERM 1297 1302656 - 1302681 + g 74 -8.9 -3.36766 | opp_overlap 1302656 1302653 1302652, overlap 1302652 1302651 CCGGGGGATAAGGAA CAGGCGGCG CATTATCA CGCCGCCCG TTCGGTTTCTGTATC CD1107 1303465 - 1302731 - | hypothetical protein TERM 1298 1303419 - 1303398 - G 100 -10.1 -4.99035 | GCAGGGACAGAAAAA CCGCCCATA AGGA TAAGGGCGG CACAAAGGGCAGTCA CD1107A 1303706 - 1303449 - | hypothetical protein TERM 1299 1303566 - 1303582 + g 81 -9.5 -3.66666 | GGTCAGACGCATAGC TCGTACA AGC TGTACGA TTTCAAGGTTTTCCG CD1108 1305678 - 1303738 - | putative DNA-repair protein TERM 1300 1304222 - 1304238 + g 77 -7.9 -4.18702 | opp_overlap 1304219 1304220 1304235, overlap 1304235 CCGTCGGGAGAACCG CCGCCGA AAA TCAGCGG TTTGTTGCCGCTTGT TERM 1301 1304837 - 1304784 - G 79 -10.3 -3.02851 | gap 1, opp_overlap 1304805 1304820 1304822, overlap 1304805 TAATAAAGAGAAGCA GCGCGGCAACTGCAATCAAAACACCC GCC GGGTGTCTTG-CCGCAAATGCGGCGG CTTTCCTTGTTTCCT TERM 1302 1304817 - 1304805 - G 100 -9.1 -4.43309 | opp_overlap 1304805, overlap 1304784 CAACTGCAATCAAAA CACCC GCC GGGTG TCTTGCCGCAAATGC TERM 1303 1304805 - 1304817 + g 75 -9.1 -3.02144 | opp_overlap 1304805 1304784 CAACTGCAATCAAAA CACCC GCC GGGTG TCTTGCCGCAAATGC TERM 1304 1304822 - 1304838 + g 70 -6.5 -4.16371 | opp_overlap 1304784, overlap 1304820 CCCGCCGGGTGTCTT GCCGC AAATGCG GCGGC TTTCCTTGTTTCCTC TERM 1305 1305263 - 1305273 + g 72 -4.6 -4.93316 | overlap 1305229 TTTCCCTTTTTGCCG CCGG GTA TCGG TTTTTCCTGTTCTTC TERM 1306 1305377 - 1305399 + g 80 -6.9 -4.77925 | gap 1 GGGATAGCTGCCTTT GCCGC-GTCC AGTT GGTCAGCGGC TTTTTCCGATTTTTT TERM 1307 1305475 - 1305517 + g 71 -2.1 -5.34381 | gap 1, opp_overlap 1305488, overlap 1305475 1305488 CTGTAAGCGGGAAGT GGAAGTACGCAAAGCAGTAG CTTC CTGCTCTTTTTTG-ACTTCC TTTTTGTTTGCCTTT TERM 1308 1305664 - 1305674 + g 72 -8.2 -3.24281 | opp_overlap 1305664 1305663, overlap 1305663 GTTTACCTCGATAAG CCCG TCG CGGG TCATTTTCTGTGTGA CD1109 1306664 - 1305705 - | modification DNA methylase TERM 1309 1306324 - 1306341 + g 72 -8.4 -3.35813 | AAGTCCTTTTGCTTG CAGCCG ATAACG CGGCTG TTCCTTGCAATCCGC CD1110 1309090 - 1306661 - | putative conjugal transfer protein TERM 1310 1307134 - 1307150 + gr 71 -6.5 -4.03234 | TACCTAACTTTTTAA GCTGCTT CCC AAGCTGC TTTATATCAAAGCAG TERM 1311 1308061 - 1308071 + gr 72 -6.8 -4.09321 | overlap 1308041 1308064 TGCGGCTCTGTAAGT CCTG CAA CAGG TTCTTTGCTTCGCTG TERM 1312 1308458 - 1308440 - GR 89 -8.8 -4.56914 | CCAGTCAAAGGAAAA GGAGAACG GCT CGCCCTCC GGGTGGAATACCCCA TERM 1313 1309052 - 1309065 + gr 72 -5.9 -4.49311 | overlap 1309053 CTTACGCCTGTTTCC TGCGG CTTC CCGCG TCTTTTTTGTTTGTC CD1111 1309442 - 1309038 - | hypothetical protein TERM 1314 1309354 - 1309326 - GR 89 -4.4 -5.86061 | opp_overlap 1309351, overlap 1309328 TTTGAGCAAAAAAAA CAGCGGCAGTCC GATTA AGAGAGCCGCCG CAAAACAAACGATTT CD1112 1310333 - 1309464 - | hypothetical protein TERM 1315 1310138 - 1310123 - G 73 -8.2 -3.53366 | opp_overlap 1310128 CATAGGTAATGACAA GCCCCG CAAT CGGGAC GATTACATTTTCAGA CD1113 1310565 - 1310350 - | putative conjugative transfer protein TERM 1316 1310644 - 1310618 - R 90 -7.3 -5.28826 | gap 1, overlap 1310620 1310636 AAAGGGCATAAAAAA CGGCGGTCAGTT TTCA AACTG-CCGCGG TCATAAGTCCCCGCG TERM 1317 1310675 - 1310685 + r 72 -8.2 -3.18321 | opp_overlap 1310636, overlap 1310653 1310673 CTGCGTAAAGTTCTG CCGC GCG GCGG TATTCAGTTGTCAGT CD1114 1310808 - 1310689 - | hypothetical protein CD1115 1312712 - 1310925 - | putative conjugal transfer protein TERM 1318 1312201 - 1312184 - G 81 -8.3 -4.26903 | CGCACTCGACTAAAA CCGTCCC TTTC GGGTCGG TTACAACGTAGCTGC CD1116 1313185 - 1312709 - | hypothetical protein CD1117 1313486 - 1313268 - | hypothetical protein CD1118 1314481 - 1313507 - | hypothetical protein TERM 1319 1314099 - 1314125 + g 88 -9.4 -4.16943 | overlap 1314100 1314106 1314107 AATTGCGTTGGATTT TCCGATGTCGGG TTA TCCGGTGTCGGA TTTTCCAATATCGGC TERM 1320 1314129 - 1314155 + g 75 -7.3 -4.13767 | opp_overlap 1314136, overlap 1314100 1314107 1314106 TCCGGTGTCGGATTT TCCAATATCGG CTTAT CCGCTGTTGGA TTTTCCAATACCGGA TERM 1321 1314178 - 1314136 - G 75 -9.2 -3.03124 | opp_overlap 1314100 1314107 1314106 1314129, overlap 1314166 TCGGATTTTCCAATA TCGGCTTATCCGCTGTTGGA TTT TCCAATACCGGACAATCCAA TGTCGGGGGCTGTGG TERM 1322 1314680 - 1314636 - H 78 -6.4 -4.86001 | gap 1, opp_overlap 1314637 1314638 1314669 1314672 1314673, overlap 1314638 1314673 ATGAGGGCATAAAAA TAGCGGCGTTCCTGTTCTCCT GTGT AGGAGTG-AGAAACGCCGCCT TATAGGTGGTGCTTA TERM 1323 1314637 - 1314679 + H 70 -7.7 -3.3854 | gap 1, opp_overlap 1314636 1314638 1314673, overlap 1314638 1314669 1314672 1314673 TGAGGGCATAAAAAT AGCGGCGTTCCTGTTCTCCT GTGT AGGAGTG-AGAAACGCCGCC TTATAGGTGGTGCTT TERM 1324 1314678 - 1314638 - H 100 -11.2 -4.05067 | gap 1, opp_overlap 1314638 1314637 1314669 1314672 1314673, overlap 1314636 1314673 GAGGGCATAAAAATA GCGGCGTTCCTGTTCTCCT GTGT AGGAGTG-AGAAACGCCGC CTTATAGGTGGTGCT TERM 1325 1314638 - 1314678 + H 83 -11.2 -2.62642 | gap 1, opp_overlap 1314636 1314638 1314673, overlap 1314637 1314669 1314672 1314673 GAGGGCATAAAAATA GCGGCGTTCCTGTTCTCCT GTGT AGGAGTG-AGAAACGCCGC CTTATAGGTGGTGCT TERM 1326 1314669 - 1314695 + H 75 -3.6 -5.58051 | opp_overlap 1314638 1314636 1314673, overlap 1314638 1314637 1314672 1314673 CCTGTGTAGGAGTGA GAAACGCCGCCT TAT AGGTGGTGCTTA TTTTATTTTTTCTTT TERM 1327 1314672 - 1314692 + H 73 -5.3 -4.75934 | opp_overlap 1314638 1314636 1314673, overlap 1314638 1314637 1314669 1314673 GTGTAGGAGTGAGAA ACGCCGCCT TAT AGGTGGTGC TTATTTTATTTTTTC TERM 1328 1314673 - 1314691 + H 77 -8.8 -3.419 | opp_overlap 1314638 1314636 1314673, overlap 1314638 1314637 1314672 1314669 TGTAGGAGTGAGAAA CGCCGCCT TAT AGGTGGTG CTTATTTTATTTTTT TERM 1329 1315006 - 1314967 - H 100 -17.6 -5.72616 | opp_overlap 1314967 1314970, overlap 1315001 ATTGATACAAAAAAA TAAGGATGTTATCTTTTA ATAA CAAAAGATAACATCCTTA TTTCTGTATTAAGGA TERM 1330 1314967 - 1315006 + H 100 -16.9 -4.2074 | opp_overlap 1314967 1315001, overlap 1314970 ATTGATACAAAAAAA TAAGGATGTTATCTTTT AATAAC AAAAGATAACATCCTTA TTTCTGTATTAAGGA TERM 1331 1314970 - 1315003 + H 100 -14.2 -4.21954 | opp_overlap 1314967 1315001, overlap 1314967 GATACAAAAAAATAA GGATGTTATCTTTT AATAAC AAAAGATAACATCC TTATTTCTGTATTAA CD1119 1315171 - 1315860 + | putative lipoprotein TERM 1332 1318249 - 1318263 + G 73 -5.8 -4.54727 | opp_overlap 1318248 TAGAAATCTAACATC TATGAT TAA ATCATA TTTTGCTTTAGGAGG dhaB1 1316081 - 1318453 + | glycerol dehydratase dhaB2 1318468 - 1319370 + | glycerol dehydratase activator TERM 1333 1319927 - 1319910 - g 79 -5.7 -5.13137 | TAAATAAAGGAAAAA CTATATT TCAC AATATAG AGGTTTATAGATAAT CD1122 1319390 - 1319941 + | putative transcriptional regulator TERM 1334 1319945 - 1319995 + F 100 -12.5 -4.95155 | gap 1, opp_overlap 1319943, overlap 1319937 1319949 GTTTATAGATAATTT TATAGTTATCCTTTTCTAAAAT AAATGAAA ATTTTAGAAAAGGATAACT-TA TTTTTATAATGTCGA TERM 1335 1319949 - 1319992 + F 100 -15.8 -4.57057 | opp_overlap 1319943, overlap 1319937 1319945 ATAGATAATTTTATA GTTATCCTTTTCTAAAAT AAATGAAA ATTTTAGAAAAGGATAAC TTATTTTTATAATGT TERM 1336 1320227 - 1320217 - g 91 -5.4 -5.7946 | opp_overlap 1320217 TTTTCAACAAAAAAA TTCC AAA GGAA TTTGATAACTTTAAA CD1123 1320105 - 1320977 + | putative phosphoesterase CD1124 1321141 - 1322121 + | hypothetical protein TERM 1337 1322477 - 1322497 + F 100 -9.9 -6.4753 | opp_overlap 1322476 1322477 ATTACAAGAATTAAT CCATAAATT TAA AATTTATGG TTTTTTTTTATTTAA TERM 1338 1322497 - 1322477 - f 79 -9.9 -2.74845 | opp_overlap 1322477, overlap 1322476 ATTACAAGAATTAAT CCATAAATT TAA AATTTATGG TTTTTTTTTATTTAA CD1124A 1322622 - 1322843 + | hypothetical protein TERM 1339 1323023 - 1323064 + F 100 -8.2 -5.61596 | opp_overlap 1323023 1323022 1323061, overlap 1323026 TCATTATAGAATAAC TTGGCTGTTTCAAAAATG TGAAAT CATTTTAGAAACAGCTTA TTTTTTTATAAAAAT TERM 1340 1323026 - 1323061 + F 100 -12.1 -4.89054 | opp_overlap 1323023 1323022, overlap 1323023 TTATAGAATAACTTG GCTGTTTCAAAAATG TGAAAT CATTTTAGAAACAGC TTATTTTTTTATAAA TERM 1341 1323102 - 1323083 - f 72 -5 -4.96501 | opp_overlap 1323083 TTTTATAAAAATAAA GAAGGC AACGGGAA GCCTTC TTTCGTGTAAAAAAA TERM 1342 1323279 - 1323238 - f 80 -9.9 -2.77161 | opp_overlap 1323235 1323242 1323252, overlap 1323235 1323242 1323246 1323252 AAAAGTGGAATATTA TTAATAAATAATAATTACA AAAT TGTAATCTTTATTTATTAA ATAAATGAGTAAAAT CD1125 1323349 - 1324218 + | nitroreductase-family protein TERM 1343 1324302 - 1324268 - f 100 -13.2 -4.8543 | opp_overlap 1324259 1324268 TAATTTTTATAAAAA GTTCAATAACATTTTA TAA TATAATGTTATTGAAC TTTTTTATTGTATAA TERM 1344 1324268 - 1324302 + F 100 -13.2 -5.60689 | opp_overlap 1324268, overlap 1324259 TAATTTTTATAAAAA GTTCAATAACATTTTA TAA TATAATGTTATTGAAC TTTTTTATTGTATAA TERM 1345 1324310 - 1324322 + F 77 -4.9 -5.28414 | TATTGAACTTTTTTA TTGTA TAA TACAA TTTTTATATTTATTG CD1126 1324444 - 1325310 + | AraC family transcription regulator TERM 1346 1325376 - 1325399 + F 73 -2.4 -5.65177 | opp_overlap 1325358, overlap 1325379 CATGAAATTCTAAAA TTACAGGCTG AAAA TAGTCTGTTA TTTTTTTGTAAATAT CD1126A 1325502 - 1325699 + | putative transcriptional regulator CD1127 1325702 - 1326145 + | hypothetical protein TERM 1347 1326324 - 1326293 - f 87 -3.9 -6.20267 | gap 1, opp_overlap 1326293 TCAAAAATAAAAAAA CTCCTA-ATCTATT GAATA AATAGCTTTAGGAG TTTTTAATGGTGCCC TERM 1348 1326466 - 1326449 - f 73 -3.5 -5.59357 | opp_overlap 1326454, overlap 1326440 1326454 ATTATAGCAAAAAAA TATATTG TTTG CAACATA TTTAATTTTAATATA TERM 1349 1327591 - 1327581 - g 72 -2.6 -5.45726 | opp_overlap 1327581, overlap 1327570 TATACTTGAAAAAAA TATA ATA TATA TTTTTATAAGTGTAG polA 1326574 - 1329222 + | DNA polymerase I coaE 1329231 - 1329833 + | putative dephospho-CoA kinase CD1130 1329826 - 1330380 + | putative transglycosylase CD1131 1330380 - 1332095 + | putative solute-binding lipoprotein TERM 1350 1332152 - 1332138 - f 75 -8.6 -3.58766 | overlap 1332140 1332141 AACTATATGATAGAA TACCCT TAT AGGGTA TAAGGAGGTAATTAA CD1132 1332168 - 1332380 + | putative heavy-metal binding protein TERM 1351 1332428 - 1332401 - f 100 -8.6 -5.75822 | GATAAACTAAAAAAA GACCTCTATT GGGGGAGT AATAGAGGTC TAAAAATGGGGGAGA CD1133 1332581 - 1333180 + | hypothetical protein gloA 1333408 - 1333779 + | lactoylglutathione lyase CD1135 1333890 - 1335185 + | putative cell wall hydrolase TERM 1352 1335511 - 1335469 - g 100 -18.2 -3.59087 | opp_overlap 1335472, overlap 1335472 AATACCATTTCTAAA TAATTCATCAGATATAACTT ATA AAGATATATCTGATGAATTA AATTCAATAAAAAAA TERM 1353 1335472 - 1335508 + G 100 -15.5 -3.19192 | opp_overlap 1335469 1335472 ACCATTTCTAAATAA TTCATCAGATATAACTT ATA AAGATATATCTGATGAA TTAAATTCAATAAAA TERM 1354 1335508 - 1335472 - g 100 -15.5 -3.9281 | opp_overlap 1335472, overlap 1335469 ACCATTTCTAAATAA TTCATCAGATATAACTT ATA AAGATATATCTGATGAA TTAAATTCAATAAAA CD1136 1335296 - 1336240 + | hypothetical protein TERM 1355 1336273 - 1336306 + F 81 -10.5 -2.68338 | opp_overlap 1336279, overlap 1336279 CTTTAGAAAGCTATA TGAAAAGGATTGTTT AATT AAGCAATCCTTTTCC TCGATTTGACTTAAT TERM 1356 1336300 - 1336279 - f 72 -5.9 -4.37534 | opp_overlap 1336273 1336279 AAAGCTATATGAAAA GGATTGTTT AATT AAGCAATCC TTTTCCTCGATTTGA TERM 1357 1336279 - 1336300 + F 80 -8.1 -4.33165 | opp_overlap 1336279, overlap 1336273 AAAGCTATATGAAAA GGATTGTTT AATT AAGCAATCC TTTTCCTCGATTTGA rnfC 1336456 - 1337793 + | electron transport complex protein rnfD 1337816 - 1338793 + | electron transport complex protein rnfG 1338793 - 1339362 + | electron transport complex protein rnfE 1339375 - 1339968 + | electron transport complex protein rnfA 1339983 - 1340558 + | electron transport complex protein rnfB 1340568 - 1341545 + | electron transport complex protein TERM 1358 1341586 - 1341557 - g 79 -7.3 -4.4727 | opp_overlap 1341561 1341563 1341565, overlap 1341561 GTAATATGGACAAAA TAAGGATATGGAA TAAT TTCCATATCTCTA ATGAGTACATAAAAC TERM 1359 1341561 - 1341582 + G 78 -10.3 -2.81133 | opp_overlap 1341557 1341561, overlap 1341563 1341565 TATGGACAAAATAAG GATATGGAA TAAT TTCCATATC TCTAATGAGTACATA TERM 1360 1341582 - 1341561 - g 81 -10.3 -3.19186 | opp_overlap 1341561 1341563 1341565, overlap 1341557 TATGGACAAAATAAG GATATGGAA TAAT TTCCATATC TCTAATGAGTACATA TERM 1361 1341590 - 1341641 + G 100 -17 -4.36554 | opp_overlap 1341591 1341596 1341601 1341603, overlap 1341592 1341601 TCCATATCTCTAATG AGTACATAAAACAGAGGTATGGAA TAAT TTCCATACCTCTATTTTATGTATA TTTATTCTAATGGTA TERM 1362 1341640 - 1341591 - g 100 -20.5 -2.72991 | opp_overlap 1341590 1341592 1341601, overlap 1341596 1341601 1341603 CCATATCTCTAATGA GTACATAAAACAGAGGTATGGAA TAAT TTCCATACCTCTATTTTATGTAT ATTTATTCTAATGGT TERM 1363 1341592 - 1341639 + G 100 -21.8 -3.78004 | opp_overlap 1341591 1341596 1341601 1341603, overlap 1341590 1341601 CATATCTCTAATGAG TACATAAAACAGAGGTATGGAA TAAT TTCCATACCTCTATTTTATGTA TATTTATTCTAATGG TERM 1364 1341635 - 1341596 - g 100 -19 -2.86164 | opp_overlap 1341592 1341590 1341601, overlap 1341591 1341601 1341603 TCTCTAATGAGTACA TAAAACAGAGGTATGGAA TAAT TTCCATACCTCTATTTTA TGTATATTTATTCTA TERM 1365 1341601 - 1341630 + G 100 -12.3 -4.70534 | opp_overlap 1341596 1341591 1341601 1341603, overlap 1341592 1341590 AATGAGTACATAAAA CAGAGGTATGGAA TAAT TTCCATACCTCTA TTTTATGTATATTTA TERM 1366 1341630 - 1341601 - g 100 -14.5 -4.59027 | opp_overlap 1341601 1341592 1341590, overlap 1341596 1341591 1341603 AATGAGTACATAAAA CAGAGGTATGGAA TAAT TTCCATACCTCTA TTTTATGTATATTTA TERM 1367 1341628 - 1341603 - g 100 -14.9 -3.89814 | opp_overlap 1341601 1341592 1341590, overlap 1341601 1341596 1341591 TGAGTACATAAAACA GAGGTATGGAA TAAT TTCCATACCTC TATTTTATGTATATT CD1142A 1341547 - 1341651 + | hypothetical protein TERM 1368 1341687 - 1341704 + F 72 -4.9 -5.07567 | opp_overlap 1341687 GTGTAACAAAAAAGG TTCGACA TTTC TGTTGAA TTTTTTACAATATAG maf 1341765 - 1342349 + | septum formation protein radC 1342346 - 1343053 + | DNA repair protein mreB2 1343123 - 1344184 + | rod shape-determining protein TERM 1369 1344282 - 1344242 - g 100 -12.9 -2.66735 | opp_overlap 1344248, overlap 1344248 AAAAAAAGGATTAAT GTTAAAGTGATAGCAAC GGGCGTA GTTGCTATCACTTTAAT TGGAATTGTGGGTAT TERM 1370 1344248 - 1344276 + G 100 -11.9 -3.9377 | opp_overlap 1344242 1344248 AGGATTAATGTTAAA GTGATAGCAAC GGGCGTA GTTGCTATCAC TTTAATTGGAATTGT TERM 1371 1344276 - 1344248 - g 95 -11.9 -3.68244 | opp_overlap 1344248, overlap 1344242 AGGATTAATGTTAAA GTGATAGCAAC GGGCGTA GTTGCTATCAC TTTAATTGGAATTGT mreC 1344188 - 1345087 + | putative rod shape-determining protein CD1147 1345102 - 1345590 + | hypothetical protein TERM 1372 1346168 - 1346156 - g 76 -6.3 -4.65819 | opp_overlap 1346155 AAAACTAAATGAAAA TGGAT ATT ATCCA CCTATTTTAGTTAGT CD1148 1345602 - 1348580 + | putative penicillin-binding protein minC 1348678 - 1349361 + | septum site-determining protein TERM 1373 1349361 - 1349337 - f 73 -8.7 -2.85621 | overlap 1349336 AATTGTAATCGAAAG CTATTTGTCAA AGT TAGACAAATAG AAAGAAAAATAGGGG divIVB 1349385 - 1350182 + | septum site-determining protein (cell division inhibitor) minE 1350200 - 1350484 + | cell division topological specificity factor TERM 1374 1350493 - 1350530 + F 86 -9.4 -4.08872 | gap 1, opp_overlap 1350498, overlap 1350498 TATGTAATTAGTGCT TAAAAGGGGGATAT-CC TTATT GGTATATGCCCCTTTTA TTTAATTATATGTTT TERM 1375 1350498 - 1350525 + F 72 -4.9 -5.02357 | gap 1, opp_overlap 1350498, overlap 1350493 AATTAGTGCTTAAAA GGGGGATAT-CC TTATT GGTATATGCCCC TTTTATTTAATTATA TERM 1376 1351278 - 1351294 + G 73 -9.5 -2.66274 | opp_overlap 1351278, overlap 1351277 GAAACTATCAAGTTA TGCAATC TCT GATTGCA ATTGGTTCTGGAGGC TERM 1377 1351294 - 1351278 - g 73 -9.5 -2.59482 | opp_overlap 1351278 1351277 GAAACTATCAAGTTA TGCAATC TCT GATTGCA ATTGGTTCTGGAGGC mrdB 1350569 - 1351699 + | rod shape-determining protein mgsA 1351740 - 1352153 + | methylglyoxal synthase TERM 1378 1352311 - 1352339 + F 73 -6.9 -4.33274 | opp_overlap 1352311 1352313 GAAATAGATTATAGA TAGAGTAGTAG AATTTAA CTATTACTCTA TTTTAATAATATGAA TERM 1379 1352465 - 1352523 + F 100 -21.1 -4.74453 | opp_overlap 1352472, overlap 1352472 TTTATTTTTAAAATT TGATAAATAGCTGTATATTAGTATTTA TAGAT TAAATATTAATATACAGCTATTTATTA TTTTTGAGTCTATTG TERM 1380 1352516 - 1352472 - f 100 -14.8 -3.97406 | opp_overlap 1352465 1352472 TTAAAATTTGATAAA TAGCTGTATATTAGTATTTA TAGAT TAAATATTAATATACAGCTA TTTATTATTTTTGAG TERM 1381 1352472 - 1352516 + F 100 -17 -4.76802 | opp_overlap 1352472, overlap 1352465 TTAAAATTTGATAAA TAGCTGTATATTAGTATTTA TAGAT TAAATATTAATATACAGCTA TTTATTATTTTTGAG CD1154 1352637 - 1352966 + | PadR-family transcriptional regulator CD1155 1352970 - 1353761 + | hypothetical protein TERM 1382 1353830 - 1353797 - f 78 -8.4 -3.8377 | opp_overlap 1353797, overlap 1353800 AATTTGTAGAGTAAA TAAGATGTTTCAAA ATAAAA TTTGAATCATCTTA TTTTTTATTGTTTGT TERM 1383 1353797 - 1353830 + F 100 -8.4 -5.74288 | opp_overlap 1353797 1353800 AATTTGTAGAGTAAA TAAGATGTTTCAAA ATAAAA TTTGAATCATCTTA TTTTTTATTGTTTGT CD1156 1354325 - 1355407 + | hypothetical protein TERM 1384 1355471 - 1355449 - T 93 -9.9 -4.13973 | opp_overlap 1355449 ACATATTATAAATAA TGCACCCTC GCACA AAGGGTGCA TTTATCATTATATCA TERM 1385 1355449 - 1355471 + T 86 -9.2 -4.12397 | opp_overlap 1355449 ACATATTATAAATAA TGCACCCT CGCACAA AGGGTGCA TTTATCATTATATCA TERM 1386 1355556 - 1355508 - T 76 -2.1 -5.86976 | gap 2, opp_overlap 1355508 1355507 TTAGAAAATAAAAAA GGAGTTGAACTTAAAATTAGATT AGAAA AAT-TAATTTTGAGA-CAACTCC ATTTTAATTTATTTT norV 1356812 - 1355619 - | putative anaerobic nitric oxide reductase flavorubredoxin CD1158 1357131 - 1358975 + | radical SAM-superfamily protein CD1159 1358977 - 1359678 + | hypothetical protein TERM 1387 1360113 - 1360099 - g 87 -3.6 -5.90981 | TTAGATTAAAAAAAA TTACTA AGG CAGTAA ATAAGGAAAATCTAG cafA 1359696 - 1361117 + | ribonuclease g rplU 1361218 - 1361529 + | 50S ribosomal protein L21 TERM 1388 1361578 - 1361590 + G 75 -4.1 -5.27335 | overlap 1361579 ATTATAATGATGATT TCTTG TTG CAAGG TTTTTGTTTAAAGGG CD1162 1361544 - 1361861 + | hypothetical protein rpmA 1361875 - 1362165 + | 50S ribosomal protein L27 TERM 1389 1362194 - 1362177 - f 79 -7 -4.68124 | opp_overlap 1362177, overlap 1362172 GTAATATACATAAAA GGAGTG TTGAGG CACTCC TTTTTCTTATAATAC TERM 1390 1362177 - 1362194 + F 93 -7.7 -5.22006 | opp_overlap 1362177 1362172 GTAATATACATAAAA GGAGTGT TGAG GCACTCC TTTTTCTTATAATAC TERM 1391 1362553 - 1362540 - g 74 -6.7 -4.31692 | AATTTAGTATTAAAA GTACC AGCA GGTAC AGTAATAAGAGATGA obg 1362276 - 1363553 + | Spo0B-associated GTP-binding protein TERM 1392 1363797 - 1363786 - g 73 -5.8 -4.53602 | opp_overlap 1363786 TTGATACTAAAGAAA CTGC TAAT GCAG TATGTGAAGCTTTAA CD1165 1363605 - 1363973 + | hypothetical protein TERM 1393 1364187 - 1364206 + F 100 -10.8 -5.85737 | opp_overlap 1364166 TAAACCCGTCATATG GCTTGAGT TTAT ACTCAAGC TTTTTTTATTGGTAT hom1 1364274 - 1365479 + | homoserine dehydrogenase TERM 1394 1365626 - 1365588 - T 78 -4.2 -5.626 | gap 3, opp_overlap 1365588 1365598 GATTTTATAAAAAAA GAGTGTCTC---ATGAACT AAAA AGTTCATTTTGAGACACTC TTTTTTAATATCTGG TERM 1395 1365588 - 1365626 + T 73 -4.2 -5.24989 | gap 3, opp_overlap 1365588, overlap 1365598 GATTTTATAAAAAAA GAGTGTCTC---ATGAACT AAAA AGTTCATTTTGAGACACTC TTTTTTAATATCTGG CD1167 1366252 - 1365680 - | putative integrase/recombinase CD1168 1367785 - 1366526 - | hypothetical protein TERM 1396 1367754 - 1367734 - G 74 -8.3 -3.68359 | TCCCTAAAACTAGAA CTCCAACTA TGA TAGATGGAG CAAAAAAAGCAATAA TERM 1397 1368279 - 1368262 - g 71 -7.1 -3.81488 | opp_overlap 1368265, overlap 1368265 TTGCTTCAAAGAGAA TAACTTC TTCT GAAGTTA TAGAATTGAAACATA CD1169 1367910 - 1368623 + | GntR family transcriptional regulator TERM 1398 1368683 - 1368716 + F 75 -9.1 -3.20808 | opp_overlap 1368683 1368690, overlap 1368682 1368679 1368685 1368690 1368691 GTACTATCATATAAA TGTAAAACTGGTATG ACCA CATACCAATTTTATA GTTTATTATAATGGG TERM 1399 1368716 - 1368683 - f 82 -9.1 -4.10164 | opp_overlap 1368683 1368682 1368679 1368685 1368690 1368691, overlap 1368690 GTACTATCATATAAA TGTAAAACTGGTATG ACCA CATACCAATTTTATA GTTTATTATAATGGG TERM 1400 1368685 - 1368714 + F 80 -9.5 -3.16079 | opp_overlap 1368683 1368690, overlap 1368683 1368682 1368679 1368690 1368691 ACTATCATATAAATG TAAAACTGGTATG ACCA CATACCAATTTTA TAGTTTATTATAATG TERM 1401 1368709 - 1368690 - f 77 -7.2 -4.41177 | opp_overlap 1368685 1368683 1368682 1368679 1368690 1368691, overlap 1368683 CATATAAATGTAAAA CTGGTATG ACCA CATACCAA TTTTATAGTTTATTA TERM 1402 1368691 - 1368708 + F 74 -8.5 -3.38727 | opp_overlap 1368690 1368683, overlap 1368690 1368685 1368683 1368682 1368679 ATATAAATGTAAAAC TGGTATG ACCA CATACCA ATTTTATAGTTTATT TERM 1403 1369916 - 1369900 - g 93 -5.9 -6.04378 | opp_overlap 1369900 AAATGATAAAAAAAA TGCATAT GAA ACATGCA TTTAACTTTAAAGAA CD1170 1368741 - 1370015 + | hypothetical protein etfB3 1370023 - 1370820 + | electron transfer flavoprotein beta-subunit etfA3 1370834 - 1372054 + | electron transfer flavoprotein alpha-subunit TERM 1404 1372746 - 1372729 - g 85 -7.1 -4.93877 | opp_overlap 1372728 CTTTACCAAAGAAAA GTATAAG TTTG CTTATAC CATTTCCAGATTTAT CD1173 1372065 - 1373456 + | putative FAD/FMN-containing dehydrogenase CD1174 1374998 - 1373718 - | hypothetical protein TERM 1405 1374511 - 1374528 + g 91 -4.3 -6.10295 | overlap 1374498 AATTGTTCCTTTGAA TAATTTT GTAT AAAATTA TTTTTTTTGTCTTGA TERM 1406 1376574 - 1376560 - g 72 -5 -4.75288 | TTAGAGGAAAAGAAA CAGTAA TAT CTACTG CTGATTCTAAAGTAA ackA 1375461 - 1376657 + | acetate kinase CD1176 1376750 - 1377274 + | hypothetical protein rpmF 1377299 - 1377475 + | 50S ribosomal protein L32 TERM 1407 1377512 - 1377489 - f 85 -8.2 -4.59511 | opp_overlap 1377490, overlap 1377478 1377490 AATAGCTTCTAAAAA GCATGTAGAG TATA CTCTACATGT TTTTTTTGTACATAT TERM 1408 1377490 - 1377511 + F 100 -11.7 -5.96219 | opp_overlap 1377489 1377490 ATAGCTTCTAAAAAG CATGTAGAG TATA CTCTACATG TTTTTTTTGTACATA TERM 1409 1377511 - 1377490 - f 95 -11.7 -3.34984 | opp_overlap 1377490, overlap 1377489 ATAGCTTCTAAAAAG CATGTAGAG TATA CTCTACATG TTTTTTTTGTACATA fapR 1377682 - 1378239 + | fatty acid biosynthesis transcriptional regulator TERM 1410 1378956 - 1378976 + G 83 -10.5 -3.43961 | TATTACTTAAATCTG CTGAAGGTG TAG CACTTTCAG TTATGAGTCTTATAA plsX 1378250 - 1379272 + | fatty acid/phospholipid synthesis protein fabH 1379298 - 1380284 + | 3-oxoacyl-[acyl-carrier-protein] synthase III fabK 1380393 - 1381322 + | trans-2-enoyl-ACP reductase fabD 1381338 - 1382288 + | malonyl CoA-acyl carrier protein transacylase TERM 1411 1382943 - 1382924 - g 70 -5 -4.56113 | overlap 1382913 AACATACCAAAGAAA TCTTATGG TAAA CCAGAAGA TGTAGCCAATGCCGT fabG 1382288 - 1383037 + | 3-oxoacyl-[acyl-carrier protein] reductase acpP 1383091 - 1383315 + | acyl carrier protein fabF 1383344 - 1384582 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 1412 1384657 - 1384680 + F 100 -12.6 -5.4756 | opp_overlap 1384657 TAGCTTAAATTTAAA GTCTCCTAAA TTAT TTTAGGAGAC TTTTTTATTAAGATT TERM 1413 1384680 - 1384657 - f 100 -12.6 -3.85165 | opp_overlap 1384657 TAGCTTAAATTTAAA GTCTCCTAAA TTAT TTTAGGAGAC TTTTTTATTAAGATT TERM 1414 1384863 - 1384880 + G 77 -5.7 -4.99645 | opp_overlap 1384866 TAATTTTTATATGTA TAATACT TATT AGTATTA TTTTGTTTATAAAGT CD1185 1384808 - 1386526 + | putative signaling protein TERM 1415 1386536 - 1386513 - f 74 -8.4 -3.32695 | opp_overlap 1386515, overlap 1386512 1386527 TTGGTAGAAATAAAG TAGTATATAA GTAA TTATATACTA TATAAATAAGAGGTA CD1186 1386557 - 1388557 + | putative sigma-54 dependent transcriptional regulator TERM 1416 1388744 - 1388709 - f 80 -10 -2.88961 | opp_overlap 1388709, overlap 1388711 TAAAATAGGATTAGA TAGGTAATAGGTTA AGTTAGAA TAACCCATTACCTA TTTTTATTTGTAAGA TERM 1417 1388709 - 1388744 + F 100 -7.8 -5.38054 | opp_overlap 1388709 1388711 TAAAATAGGATTAGA TAGGTAATAGGTTA AGTTAGAA TAACCCATTACCTA TTTTTATTTGTAAGA TERM 1418 1388742 - 1388711 - f 71 -8.2 -2.98304 | opp_overlap 1388709, overlap 1388709 AAATAGGATTAGATA GGTAATAGGTTA AGTTAGAA TAACCCATTACC TATTTTTATTTGTAA CD1187 1388905 - 1389153 + | hypothetical protein CD1188 1389188 - 1389913 + | putative glutamine amidotransferase TERM 1419 1390346 - 1390308 - g 78 -4.2 -5.4492 | gap 1 CACATATACAAAAAA TTATAATTGT-AGCC ATGATAGTTG GGCTTACAATTATAA ACTTATTAGGTGTAT CD1189 1389920 - 1391248 + | putative amino acid permease TERM 1420 1391315 - 1391366 + F 73 -7.8 -3.82378 | opp_overlap 1391320, overlap 1391328 ATACAAATAAGTATC TATAAGGCTATATTAAAATA TTATTAATTTTT TATTTTAATATAGCCTTAAA TTGTTATCAATAAGT TERM 1421 1391361 - 1391320 - f 70 -7.7 -3.4071 | opp_overlap 1391315 1391328 AATAAGTATCTATAA GGCTATATTAAAATA TTATTAATTTTT TATTTTAATATAGCC TTAAATTGTTATCAA TERM 1422 1391400 - 1391388 - f 70 -4.9 -4.8143 | TCAATAAGTGAAAAA TATTG TAA CAATA GAAGAACAATAGTAT CD1190 1391454 - 1391993 + | putative acetyltransferase fbp 1392082 - 1394067 + | putative fructose-1,6-bisphosphatase TERM 1423 1394078 - 1394099 + F 100 -9.5 -5.16071 | opp_overlap 1394078 TGTAGATGTTATAGA GGCACTTCA TGAT TGAAGTGTC TTTTTGTTAATACTT TERM 1424 1394166 - 1394190 + F 100 -6.5 -6.02919 | opp_overlap 1394166 TATTATACTTACTAA GTGAATCCA AAATAAA TGGGTTCAC TTTTTTTATTTATAA spoIIIAA 1394291 - 1395259 + | stage III sporulation protein AA TERM 1425 1395690 - 1395676 - g 72 -4.2 -5.05153 | ATTTGAAAAAACAAA CCTATG AGA CAAAGG AAGATATAAACAAAA spoIIIAB 1395249 - 1395770 + | stage III sporulation protein AB spoIIIAC 1395772 - 1395984 + | stage III sporulation protein AC spoIIIAD 1396000 - 1396386 + | stage III sporulation protein AD spoIIIAE 1396465 - 1397676 + | stage III sporulation-related protein spoiIIIAF 1397736 - 1398353 + | putative stage III sporulation protein AF TERM 1426 1398525 - 1398514 - g 75 -4.4 -5.17744 | AGAGACTAATAAAAA TGCT GAAA AGCA AGTCACTAAAGAACA TERM 1427 1398790 - 1398766 - g 73 -9.4 -2.58812 | overlap 1398762 TTCAAATTCAAGTGA CCCTGTAGTT ATAAA AACTACAGAG CCAAAGATAAAGGGA spoIIIAG 1398365 - 1398919 + | stage III sporulation protein AG TERM 1428 1399469 - 1399452 - g 87 -8.5 -4.79451 | ACTTCAAATAGAAAA CCTTTTG AGTA CAAAAGG GTATGAAGAAGCGTT spoIIIAH 1398946 - 1399635 + | putative stage III sporulation protein AH TERM 1429 1399641 - 1399664 + F 71 -5.3 -4.63932 | opp_overlap 1399644, overlap 1399644 TAATAAGTAAAGTAT AAACCTCAG AATTAA CTGAGGTTA TTTTCTTGCAAAGTA TERM 1430 1399644 - 1399661 + F 77 -7 -4.43307 | opp_overlap 1399644, overlap 1399641 TAAGTAAAGTATAAA CCTCAG AATTAA CTGAGG TTATTTTCTTGCAAA TERM 1431 1399661 - 1399644 - f 73 -7 -4.17448 | opp_overlap 1399641 1399644 TAAGTAAAGTATAAA CCTCAG AATTAA CTGAGG TTATTTTCTTGCAAA CD1200 1399745 - 1400107 + | hypothetical protein TERM 1432 1400134 - 1400113 - f 73 -8.7 -2.8719 | opp_overlap 1400114, overlap 1400110 GAAAAATTAATATTA GCCCTCTGA AAAG TCAGAGGGT TTTTTGCTGGTAATT TERM 1433 1400114 - 1400133 + F 100 -12.2 -5.19212 | opp_overlap 1400113 1400110 AAAAATTAATATTAG CCCTCTGA AAAG TCAGAGGG TTTTTTGCTGGTAAT nusB 1400189 - 1400698 + | N utilization substance protein B TERM 1434 1400720 - 1400748 + G 83 -10.5 -3.27408 | opp_overlap 1400722, overlap 1400715 AATTGGAATTGATAC TAGCTGCTATA CTACTTC TATAGCAGCTA TCTCTTTAGATAAGA TERM 1435 1400746 - 1400722 - g 70 -8.7 -2.66733 | opp_overlap 1400720 1400715 TTGGAATTGATACTA GCTGCTATA CTACTTC TATAGCAGC TATCTCTTTAGATAA gcp 1400682 - 1401752 + | O-sialoglycoprotein endopeptidase xseA 1401749 - 1402954 + | exodeoxyribonuclease VII large subunit xseB 1402956 - 1403171 + | exodeoxyribonuclease VII small subunit ispA 1403174 - 1404061 + | geranyltranstransferase CD1206 1404091 - 1404528 + | hypothetical protein TERM 1436 1405161 - 1405149 - g 74 -6.3 -4.37157 | AAGTATTATAAGAAA CTCAA CAG TTGAG AAAATGACAGATGAA dxs 1404562 - 1406427 + | 1-deoxy-D-xylulose 5-phosphate synthase TERM 1437 1406513 - 1406538 + F 93 -9.9 -4.07687 | AGTGTGTTACTTCAA GCTACTTTAGT TATC ATTAAAGTAGC TTTTAACAGAAAGGT CD1208 1406560 - 1407372 + | putative RNA methyltransferase TERM 1438 1407423 - 1407442 + G 76 -9.4 -3.20348 | ATATGAAAAATTGTG CCTTAGTT GAAG AACTAAGG TTGAATATTGATAAA recN 1407392 - 1409071 + | DNA repair protein TERM 1439 1409091 - 1409128 + F 100 -8.7 -5.31275 | opp_overlap 1409093 AAACAAGCATTTTAA TAGGTGTAAAGAATTTT TATA GAAATGCTTTACATCTA TTTTTTATGATGAAA TERM 1440 1409316 - 1409327 + G 78 -3 -5.64321 | CTATGCACTTAATTT TTAC AATT GTAA TTTTTATTTTATTAT CD1210 1409285 - 1410151 + | hypothetical protein TERM 1441 1410235 - 1410195 - T 100 -15.2 -4.63486 | opp_overlap 1410197 1410199 ATTTGTTCAATAAAA TAGAGTATAAATAAAACT GTAGT AGTTTTACTTATACTCTA TTAAAAAATTATAAT TERM 1442 1410197 - 1410233 + T 90 -11.9 -3.04799 | opp_overlap 1410195, overlap 1410199 TTGTTCAATAAAATA GAGTATAAATAAAACTG TAG TAGTTTTACTTATACTC TATTAAAAAATTATA TERM 1443 1410199 - 1410231 + T 74 -8.7 -3.0782 | opp_overlap 1410195, overlap 1410197 GTTCAATAAAATAGA GTATAAATAAAACTG TAG TAGTTTTACTTATAC TCTATTAAAAAATTA CD1211 1410723 - 1410244 - | putative acetyltransferase bltD 1411236 - 1410796 - | spermine/spermidine acetyltransferase TERM 1444 1412387 - 1412373 - g 79 -5.8 -5.12916 | opp_overlap 1412365 1412372, overlap 1412365 TACAAAATAATAAAA TTATTG GTG CAATAA CTCATGTTTTTAGAG spoIVB 1411397 - 1412455 + | stage IV sporulation protein B spo0A 1412597 - 1413421 + | stage 0 sporulation protein A TERM 1445 1413523 - 1413481 - f 100 -18.7 -3.41795 | opp_overlap 1413482 1413484, overlap 1413484 1413490 AAATGCGTATTACAA GCAGCGAAACGGTATAACC ACTAG GGTTATACCGTTTCGCTAT TTTAATAAATATAAA TERM 1446 1413482 - 1413522 + F 100 -20 -4.29738 | opp_overlap 1413481 1413484 1413490, overlap 1413484 AATGCGTATTACAAG CAGCGAAACGGTATAACC ACTAG GGTTATACCGTTTCGCTA TTTTAATAAATATAA TERM 1447 1413520 - 1413484 - f 100 -22.6 -2.86271 | opp_overlap 1413482 1413484, overlap 1413481 1413490 TGCGTATTACAAGCA GCGAAACGGTATAACC ACTAG GGTTATACCGTTTCGC TATTTTAATAAATAT TERM 1448 1413484 - 1413520 + F 100 -22.6 -3.74902 | opp_overlap 1413484 1413481 1413490, overlap 1413482 TGCGTATTACAAGCA GCGAAACGGTATAACC ACTAG GGTTATACCGTTTCGC TATTTTAATAAATAT TERM 1449 1413514 - 1413490 - f 95 -13 -3.72984 | opp_overlap 1413484 1413482, overlap 1413484 1413481 TTACAAGCAGCGAAA CGGTATAACC ACTAG GGTTATACCG TTTCGCTATTTTAAT TERM 1450 1414305 - 1414278 - g 81 -2.8 -5.75538 | overlap 1414281 GCTAAAAAAGAAAAA GGATTTATACTT GGAG AAGTAGAAATTC CAAAAGTGAAAACTA CD1215 1413834 - 1414955 + | putative pyrophosphokinase CD1216 1414973 - 1415848 + | hypothetical protein CD1217 1415872 - 1416564 + | putative glycosyltransferase CD1218 1416572 - 1417396 + | putative glycosyltransferase CD1219 1417401 - 1418468 + | hypothetical protein TERM 1451 1418787 - 1418775 - g 70 -3.5 -5.07567 | GTATAGTGCAAAAAA TATTA AGC TAATA CATAAATTTTTCACT nudF 1418470 - 1419006 + | ADP-ribose pyrophosphatase CD1221 1419074 - 1419679 + | hypothetical protein TERM 1452 1419796 - 1419784 - g 85 -3.5 -5.72616 | ATGGATATAAAAAAA TATAT GGA ATATA TAAATCAAAAAAGCA xerD1 1419691 - 1420605 + | putative tyrosine recombinase deoB 1420647 - 1421819 + | phosphopentomutase deoD 1421866 - 1422678 + | purine nucleoside phosphorylase deoA 1422867 - 1424207 + | pyrimidine-nucleoside phosphorylase TERM 1453 1424229 - 1424268 + F 78 -5.3 -5.15634 | opp_overlap 1424236, overlap 1424236 TTAGAAAAGTGATTA TAAAAGGCCTAACAT GTCAAAAATA ATGTTAGGTTTTTTA TTTTTTGATAAACTA TERM 1454 1424236 - 1424261 + F 83 -3.4 -6.04324 | opp_overlap 1424236, overlap 1424229 AGTGATTATAAAAGG CCTAACAT GTCAAAAATA ATGTTAGG TTTTTTATTTTTTGA CD1226 1424420 - 1425499 + | putative exported aminodeoxychorismate lyase CD1227 1425671 - 1426345 + | putative O-methyltransferase TERM 1455 1427072 - 1427045 - g 70 -8.6 -2.71447 | overlap 1427042 1427047 1427049 ATGTATGATAGAGTA TATACCAGAGTT AATC AAATCTGGTATA ACAAGTTTAAAAATA CD1228 1426332 - 1427579 + | putative protease TERM 1456 1427606 - 1427643 + F 74 -8.8 -2.99871 | overlap 1427603 TAAAAATAGTATTAG CCCCTTAGA-AATTGTCA ATAA TGA-AATTATCTAAGGGG TGATTTCATGTCAAA TERM 1457 1428848 - 1428834 - g 86 -5 -5.5112 | TTGATGAAGAAAAAA TTAGAG AAG CTCCAA AAAACATATCAATAA TERM 1458 1429044 - 1429028 - g 74 -3 -5.41746 | overlap 1429016 AAGTCTTCAAAAAAA GAAGAA CTTAT TTCTCC TTATGTGTGTACACA TERM 1459 1429211 - 1429197 - g 74 -8.6 -3.37056 | ACCATGGATGGATAA CAGGAT TTT ATCCTG AAGAAAGACCTAAGT CD1229 1427651 - 1429315 + | putative penicillin-binding protein sigK 1444739 - 1429412 - | sporulation sigma factor SigK CD1231 1431236 - 1429719 - | site-specific recombinase TERM 1460 1431024 - 1431052 + g 72 -6.1 -4.27259 | TGCATCATATTTATT TTCTTCAACTTCT TTT AGAAGTTCAAGCA TTTTGGGTCTATGTA TERM 1461 1431292 - 1431350 + gr 100 -12.2 -3.18033 | opp_overlap 1431293 1431302, overlap 1431293 1431295 1431302 TCAATAGAGTTTAAA ATATAGAAAATAAGCATGTCAAAAGTTA ATT TAACTTTCAACATACTTATTTTCTATAA TATTAATGCCTTATA TERM 1462 1431293 - 1431349 + gr 100 -15.7 -2.50338 | opp_overlap 1431293 1431302, overlap 1431292 1431295 1431302 CAATAGAGTTTAAAA TATAGAAAATAAGCATGTCAAAAGTTA ATT TAACTTTCAACATACTTATTTTCTATA ATATTAATGCCTTAT TERM 1463 1431349 - 1431293 - GR 100 -22.3 -4.19472 | opp_overlap 1431292 1431293 1431295 1431302, overlap 1431302 CAATAGAGTTTAAAA TATAGAAAATAAGCATGTCAAAAGTTA ATT TAACTTTCAACATACTTATTTTCTATA ATATTAATGCCTTAT TERM 1464 1431295 - 1431347 + gr 100 -13.9 -2.78266 | opp_overlap 1431293 1431302, overlap 1431293 1431292 1431302 ATAGAGTTTAAAATA TAGAAAATAAGCATGTCAAAAGTTA ATT TAACTTTCAACATACTTATTTTCTA TAATATTAATGCCTT TERM 1465 1431302 - 1431340 + gr 76 -6.2 -4.61147 | opp_overlap 1431302 1431293, overlap 1431295 1431293 1431292 TTAAAATATAGAAAA TAAGCATGTCAAAAGTTA ATT TAACTTTCAACATACTTA TTTTCTATAATATTA TERM 1466 1431340 - 1431302 - GR 100 -12.8 -4.78933 | opp_overlap 1431295 1431293 1431292 1431302, overlap 1431293 TTAAAATATAGAAAA TAAGCATGTCAAAAGTTA ATT TAACTTTCAACATACTTA TTTTCTATAATATTA CD1232 1432182 - 1431361 - | putative lipoprotein TERM 1467 1431737 - 1431749 + g 79 -7.7 -4.2243 | opp_overlap 1431737 ATTTTGACATAATTA GAGCT AAG AGCTC TTTTAAAGTCTTTAT TERM 1468 1432842 - 1432832 - Gg 70 -5.4 -4.66537 | AACAAAGTAAATAAA GTCA TAT TGAC TAATGCATTTAAAGG CD1233 1432373 - 1433800 + | cell surface protein TERM 1469 1433920 - 1433942 + gF 72 -9 -2.57244 | opp_overlap 1433919 TGTACAAAAGATTAT CCTCCCAACG ATT CGAAGGGAGG TGAGTTCATGGATAA TERM 1470 1434060 - 1434038 - Gg 82 -6.3 -5.25735 | TCAAAAAAGCAAAAA GCCACTCTC GCACA AAGAGTGAC TTACGAGTTGAATTT CD1233A 1433950 - 1434102 + | hypothetical protein TERM 1471 1434112 - 1434100 - Gf 77 -4.9 -5.22039 | TTTAAATCCAAAAAA TAAAC TCT GTTTA TGATGAACTCCACTC TERM 1472 1434257 - 1434306 + gF 100 -19.2 -4.58585 | opp_overlap 1434263 1434272 ATTTTATTATAGAGC TATTAACTTATGAAATATCTGT AAATGA GCAGATATTTCATAAGTTAATA TTTATTGTTTACATA TERM 1473 1434300 - 1434263 - Gf 100 -13.1 -3.21354 | opp_overlap 1434257, overlap 1434272 TTATAGAGCTATTAA CTTATGAAATATCTG TAAATGAG CAGATATTTCATAAG TTAATATTTATTGTT TERM 1474 1435525 - 1435514 - Gf 71 -3 -5.30616 | opp_overlap 1435514, overlap 1435508 GTATGTAAAGAAAAA TCTT ATTA AAGA TTATTCAAAGTCTTT CD1234 1437224 - 1437475 + | hypothetical protein TERM 1475 1437511 - 1437483 - GT 70 -7.5 -3.44156 | opp_overlap 1437489 1437490, overlap 1437488 AAAGTTAAGAGAATA GAGAAGTTGCTAA TAC TTAGCACTTTCTC ATAGAAGAAAATTGG TERM 1476 1437775 - 1437759 - GT 89 -3.8 -6.08342 | overlap 1437769 CAATAAATAAAAAAA CTTATA GAAAT TATAAG ATAAAAAGATGAGAT TERM 1477 1438648 - 1438624 - GT 78 -4.4 -5.38951 | opp_overlap 1438624 AACTTATACAAAAAA GAGTGTTT CATTTTTCT AAACACTC TTTTTATAAGAATTT TERM 1478 1438624 - 1438648 + gT 70 -4.4 -4.86033 | opp_overlap 1438624 AACTTATACAAAAAA GAGTGTTT CATTTTTCT AAACACTC TTTTTATAAGAATTT CD1235 1439079 - 1438696 - | hypothetical protein TERM 1479 1438773 - 1438793 + g 71 -3.3 -5.30199 | overlap 1438775 TAGATTCTCTATTTG AATAAAGAC CTG GTCTTTGTA TTTTTATTGCTTTTT TERM 1480 1438775 - 1438791 + g 70 -5.9 -4.23353 | overlap 1438773 GATTCTCTATTTGAA TAAAGAC CTG GTCTTTG TATTTTTATTGCTTT CD1236 1439206 - 1439550 + | hypothetical protein CD1238 1441251 - 1440934 - | hypothetical protein TERM 1481 1441396 - 1441374 - GH 81 -6.3 -5.05228 | ATTAAATGAGAAAAA GATGGTAAG TTAAC CCCACCATC TTATTTTTTATCTAC TERM 1482 1442016 - 1442001 - GH 72 -4.8 -4.88495 | opp_overlap 1442001 ATACATACAATAAAA CTTAAT ATAA ATTAAG TATATGAAATAAATA TERM 1483 1442163 - 1442189 + gH 86 -5.2 -5.57396 | opp_overlap 1442145 1442166, overlap 1442166 1442174 TGAATATATAATCCA AAAGTACTCTCT AAA ATAGAGTACTTC TTTTTTATTAATTAT TERM 1484 1442166 - 1442186 + gH 80 -6.9 -4.82661 | opp_overlap 1442166, overlap 1442163 1442174 ATATATAATCCAAAA GTACTCTCT AAA ATAGAGTAC TTCTTTTTTATTAAT TERM 1485 1442186 - 1442166 - GH 74 -6.9 -4.3487 | opp_overlap 1442166 1442163 1442174 ATATATAATCCAAAA GTACTCTCT AAA ATAGAGTAC TTCTTTTTTATTAAT CD1239 1442312 - 1442701 + | putative regulatory protein TERM 1486 1442687 - 1442717 + gF 91 -8.5 -4.98531 | opp_overlap 1442687 AATTTGAAAGAAGGA GATATTGATGACT AATAA AGTTATCAGTATC TTTTTAGTTTGAGAC TERM 1487 1443018 - 1442966 - Gf 100 -11.9 -4.13246 | gap 1, opp_overlap 1442979, overlap 1442969 TAGTTGACAGATAAA TTACCTTACTATATTATTGTATTA ATAAAA TAATACAATAATATAGTAAGG-AG GTAATAAATGAAATC TERM 1488 1443016 - 1442969 - Gf 100 -20.5 -3.09116 | opp_overlap 1442979, overlap 1442966 TTGACAGATAAATTA CCTTACTATATTATTGTATTA ATAAAA TAATACAATAATATAGTAAGG AGGTAATAAATGAAA vanZ 1443026 - 1443535 + | putative teicoplanin resistance protein TERM 1489 1443609 - 1443624 + gT 80 -9 -3.81929 | opp_overlap 1443609 ATTTACACATAAAAA GCACCT ATAC AGGTGC TTTCCTAAATTATTA TERM 1490 1443624 - 1443609 - GT 100 -9 -5.04597 | opp_overlap 1443609 ATTTACACATAAAAA GCACCT ATAC AGGTGC TTTCCTAAATTATTA CD1240A 1443831 - 1443637 - | putative phage-related DNA-directed RNA polymerase 7 kDa polypeptide TERM 1491 1443672 - 1443682 + g 70 -4 -4.90321 | GAAACTCTTGTATGT TCAA TTC TTGA TTTTCTCTTGTTTTT CD1242 1445294 - 1445668 + | hypothetical protein TERM 1492 1445725 - 1445755 + G 76 -10 -2.81937 | opp_overlap 1445751, overlap 1445722 1445751 TAAGTACTGTGTGCA TTATGTGTATAGGT TTA ATTTATACACATAA TAATATGTTTGAGTT TERM 1493 1446363 - 1446353 - g 78 -3.2 -5.52384 | TTTTGATGAAAAAAA CCTA GTA CAGG TATATAAGTATAGGG CD1243 1445652 - 1446386 + | hypothetical protein CD1244 1446406 - 1446825 + | hypothetical protein CD1245 1446815 - 1447339 + | hypothetical protein efp 1447651 - 1448208 + | elongation factor P TERM 1494 1448221 - 1448266 + F 86 -9.4 -4.12532 | opp_overlap 1448212 1448227, overlap 1448220 1448218 1448222 1448227 TAAAAATTTATGTAT ATAAAAGCTTATATGTCTTA ATAATA TAAGATATATGAGCTTTTAG TTTATATATAAAAAA TERM 1495 1448222 - 1448265 + F 93 -12.9 -3.07198 | opp_overlap 1448212 1448227, overlap 1448220 1448218 1448221 1448227 AAAAATTTATGTATA TAAAAGCTTATATGTCTTA ATAATA TAAGATATATGAGCTTTTA GTTTATATATAAAAA TERM 1496 1448227 - 1448260 + F 85 -8.4 -4.66057 | opp_overlap 1448227, overlap 1448220 1448218 1448222 1448221 TTTATGTATATAAAA GCTTATATGTCTTA ATAATA TAAGATATATGAGC TTTTAGTTTATATAT CD1247 1448300 - 1448755 + | hypothetical protein TERM 1497 1448770 - 1448819 + F 76 -5.9 -4.82901 | opp_overlap 1448770 AAAATTCATAAGAAT TAAAACTGCCTATGATGCCTA TGAGATAT TTTGCTTCATAGGTAGTTTTA TTTTTATGAGGAAGG rnc 1448918 - 1449628 + | putative ribonuclease III CD1249 1449682 - 1450752 + | radical SAM-superfamily protein smc 1450780 - 1454334 + | chromosome partition protein ftsY 1454361 - 1455641 + | putative signal recognition particle CD1251A 1455744 - 1456112 + | hypothetical protein ffh 1456109 - 1457461 + | signal recognition particle protein rpsP 1457499 - 1457771 + | 30S ribosomal protein S16 CD1254 1457836 - 1458063 + | hypothetical protein TERM 1498 1458071 - 1458093 + F 100 -9.2 -4.99035 | opp_overlap 1458071 TAGTATAAAATAGGA GGATTAGGTA TAA TGCCTAGTCC TTTTTATATAAATGC rimM 1458171 - 1458686 + | putative 16S rRNA processing protein trmD 1458695 - 1459390 + | tRNA (guanine-n(1)-)-methyltransferase rplS 1459575 - 1459925 + | 50S ribosomal protein L19 TERM 1499 1459948 - 1459969 + F 86 -8.7 -4.48449 | CTTTACTTATAAATG GGGGGCTGA TTTA TCAGTCCTC TTTCTATTTTAATGA TERM 1500 1460314 - 1460288 - g 70 -8.8 -2.63614 | opp_overlap 1460295, overlap 1460296 ATGAATGACAATCTA CATATAAACTGG TAT CCAGGTCATATG AAAAAAACTAAGGAG TERM 1501 1460306 - 1460296 - g 72 -6.8 -4.15061 | opp_overlap 1460295, overlap 1460288 CAATCTACATATAAA CTGG TAT CCAG GTCATATGAAAAAAA TERM 1502 1460333 - 1460322 - g 78 -3 -5.58454 | GTCATATGAAAAAAA CTAA GGAG TTAG TAAAAAATAACTTAA CD1258 1460273 - 1461142 + | putative GTPase TERM 1503 1461210 - 1461179 - f 90 -10.4 -3.39618 | opp_overlap 1461180 1461187, overlap 1461180 1461187 TTTAATGTTAAAAAT TTAAAAAAGCCTTT TAGC AAAGGCTTTTTTAT TTTTTTGAAATATAG TERM 1504 1461180 - 1461209 + F 100 -13.9 -5.45726 | opp_overlap 1461179 1461180 1461187, overlap 1461187 TTAATGTTAAAAATT TAAAAAAGCCTTT TAGC AAAGGCTTTTTTA TTTTTTTGAAATATA TERM 1505 1461209 - 1461180 - f 100 -13.9 -2.63289 | opp_overlap 1461180 1461187, overlap 1461179 1461187 TTAATGTTAAAAATT TAAAAAAGCCTTT TAGC AAAGGCTTTTTTA TTTTTTTGAAATATA TERM 1506 1461202 - 1461187 - f 100 -7.6 -5.30575 | opp_overlap 1461180 1461187, overlap 1461180 1461179 TAAAAATTTAAAAAA GCCTTT TAGC AAAGGC TTTTTTATTTTTTTG TERM 1507 1461187 - 1461202 + F 100 -7.6 -6.12458 | opp_overlap 1461187 1461180 1461179, overlap 1461180 TAAAAATTTAAAAAA GCCTTT TAGC AAAGGC TTTTTTATTTTTTTG TERM 1508 1461947 - 1461934 - g 71 -6.7 -3.99775 | ATGTACTAACAATAA GACCT TCTA AGGTC GTAGATATAGTTGGA TERM 1509 1462543 - 1462557 + G 71 -7.2 -3.86897 | TAAAGATAGCATCTC CTATAC TAA GTATAG TTTATCCACCATCAA CD1259 1461531 - 1462823 + | branched-chain amino acid transport system carrier protein TERM 1510 1462868 - 1462917 + F 100 -17.7 -3.80026 | opp_overlap 1462869 1462875 1462876 1462881, overlap 1462869 1462876 1462881 TAAATAAATGAGTTA ACTAAAAGTAAAAGGAGTTATTT GTAC AAATAACTCCTTTTATTTTTAGA TTCTATATTTAATTA TERM 1511 1462916 - 1462869 - f 100 -19 -3.19472 | opp_overlap 1462868 1462869 1462876 1462881, overlap 1462875 1462876 1462881 AAATAAATGAGTTAA CTAAAAGTAAAAGGAGTTATTT GTAC AAATAACTCCTTTTATTTTTAG ATTCTATATTTAATT TERM 1512 1462869 - 1462916 + F 100 -21.2 -2.86931 | opp_overlap 1462869 1462875 1462876 1462881, overlap 1462868 1462876 1462881 AAATAAATGAGTTAA CTAAAAGTAAAAGGAGTTATTT GTAC AAATAACTCCTTTTATTTTTAG ATTCTATATTTAATT TERM 1513 1462910 - 1462875 - f 100 -12.2 -4.43879 | opp_overlap 1462869 1462868 1462876 1462881, overlap 1462869 1462876 1462881 ATGAGTTAACTAAAA GTAAAAGGAGTTATTT GTAC AAATAACTCCTTTTAT TTTTAGATTCTATAT TERM 1514 1462909 - 1462876 - f 100 -15.7 -3.25604 | opp_overlap 1462876 1462869 1462868 1462881, overlap 1462875 1462869 1462881 TGAGTTAACTAAAAG TAAAAGGAGTTATTT GTAC AAATAACTCCTTTTA TTTTTAGATTCTATA TERM 1515 1462876 - 1462909 + F 100 -15.7 -4.79756 | opp_overlap 1462875 1462869 1462876 1462881, overlap 1462869 1462868 1462881 TGAGTTAACTAAAAG TAAAAGGAGTTATTT GTAC AAATAACTCCTTTTA TTTTTAGATTCTATA TERM 1516 1462904 - 1462881 - f 100 -11.2 -4.72729 | opp_overlap 1462876 1462869 1462868 1462881, overlap 1462876 1462875 1462869 TAACTAAAAGTAAAA GGAGTTATTT GTAC AAATAACTCC TTTTATTTTTAGATT TERM 1517 1462881 - 1462904 + F 100 -11.2 -5.29885 | opp_overlap 1462881 1462876 1462875 1462869, overlap 1462876 1462869 1462868 TAACTAAAAGTAAAA GGAGTTATTT GTAC AAATAACTCC TTTTATTTTTAGATT CD1260 1463942 - 1465234 + | branched chain amino acid transport system carrier protein TERM 1518 1465230 - 1465218 - f 77 -7.7 -4.1899 | TTATTCCATCTAAAA GCAGT AAA ACTGC ATAATAATAAAAACT TERM 1519 1465259 - 1465289 + F 100 -11.3 -5.19879 | opp_overlap 1465258 1465263 CTAATTGATAATTAT GGAATTGCCTTTA AATTA TATAGGCAATTCC TTTTTATATTTAAAA TERM 1520 1465515 - 1465505 - f 73 -2.6 -5.63517 | opp_overlap 1465505 1465514, overlap 1465514 TTTGTAAAGAAAAAA TAAA GAA TTTA TTTTCTAAATACTTA TERM 1521 1465609 - 1465570 - f 76 -2.4 -5.9667 | opp_overlap 1465574, overlap 1465574 AAAAATATAAAAAAA TAAAGTATATAAGAGT ATAATTTG ACTTTTATATACTTTT TTATATTATTTTTGA TERM 1522 1465605 - 1465574 - f 70 -3.2 -5.29742 | opp_overlap 1465574, overlap 1465570 ATATAAAAAAATAAA GTATATAAGAGT ATAATTTG ACTTTTATATAC TTTTTTATATTATTT TERM 1523 1465574 - 1465605 + F 82 -5.4 -5.57729 | opp_overlap 1465570 1465574 ATATAAAAAAATAAA GTATATAAGAGT ATAATTTG ACTTTTATATAC TTTTTTATATTATTT TERM 1524 1466455 - 1466467 + G 74 -7.7 -3.80535 | opp_overlap 1466454 1466455 TGCTGCAAAACATAC GACTG GAG CAGTC TCTTTTATGGAACTT CD1261 1465808 - 1467997 + | putative ribonucleotide-diphosphate reductase TERM 1525 1468137 - 1468125 - g 70 -3.5 -5.01535 | TTAGAAGTAGAAAAA TATAT GGA ATATA TAGAGCTGTTAAGAG rnhB 1468065 - 1468832 + | ribonuclease HII CD1263 1468890 - 1469906 + | putative FMN-dependent dehydrogenase CD1264 1469972 - 1470220 + | hypothetical protein TERM 1526 1470231 - 1470264 + T 100 -14.2 -6.23545 | opp_overlap 1470235 1470237 ATTAAATTTTATTAG CTAAGAGTAAATCA GTAATA TGATTTACTCTTAG TTTTTTTTATTTGAA TERM 1527 1470260 - 1470235 - T 78 -9.2 -3.10012 | opp_overlap 1470231, overlap 1470237 AATTTTATTAGCTAA GAGTAAATCA GTAATA TGATTTACTC TTAGTTTTTTTTATT TERM 1528 1470373 - 1470399 + T 93 -9.6 -4.40333 | opp_overlap 1470373 1470378 GATTAGTATAAAAAA TAAAACCAGTTT AAA AAACTGGTTTAA TTTGTATTCTTTGAA TERM 1529 1470399 - 1470373 - T 100 -9.6 -5.32882 | opp_overlap 1470373, overlap 1470378 GATTAGTATAAAAAA TAAAACCAGTTT AAA AAACTGGTTTAA TTTGTATTCTTTGAA TERM 1530 1470394 - 1470378 - T 100 -9.5 -5.49579 | opp_overlap 1470373, overlap 1470373 GTATAAAAAATAAAA CCAGTTT AAA AAACTGG TTTAATTTGTATTCT CD1265 1470893 - 1470396 - | putative regulatory protein CD1266 1472219 - 1471137 - | putative ABC transporter, permease protein TERM 1531 1471965 - 1471983 + g 90 -7.6 -5.22258 | CATAGCCTTATCTTG TTCATTTA ATC TAAATGAA TTTTCTTTTAATTTA CD1267 1473301 - 1472204 - | putative ABC transporter, permease protein CD1268 1474250 - 1473315 - | ABC transporter, ATP-binding protein TERM 1532 1474350 - 1474363 + r 77 -6.7 -4.56791 | opp_overlap 1474337 1474350, overlap 1474337 1474344 AAGTCACTAAAAAAA GTGAC TTAA GTCAC TTTATATTTTTAGAT TERM 1533 1474363 - 1474350 - R 88 -6.7 -5.54894 | opp_overlap 1474337 1474350 1474344, overlap 1474337 AAGTCACTAAAAAAA GTGAC TTAA GTCAC TTTATATTTTTAGAT CD1269 1475026 - 1474379 - | two-component response regulator CD1270 1476182 - 1475019 - | two-component sensor histidine kinase CD1271 1476366 - 1476710 + | hypothetical protein CD1272 1476741 - 1478342 + | putative competence protein (putative magnesium chelatase) CD1273 1478352 - 1479461 + | putative competence protein TERM 1534 1480056 - 1480037 - g 72 -4.4 -5.03994 | TGTGACAGAGAAAAA GAAATAAA GGCA TTTATTCC AAAAGAATATTGGAC topA 1479494 - 1481581 + | DNA topoisomerase I codY 1481746 - 1482531 + | transcriptional repressor CodY TERM 1535 1482588 - 1482556 - f 88 -12.3 -2.63301 | opp_overlap 1482561, overlap 1482561 TATAGGTTTAGATTA GAAAAGGTATCTATT TGA AATAGATACCTTTTT TAGACGAATTATTAA TERM 1536 1482583 - 1482561 - f 100 -12.2 -4.50976 | opp_overlap 1482561, overlap 1482556 GTTTAGATTAGAAAA GGTATCTATT TGA AATAGATACC TTTTTTAGACGAATT TERM 1537 1482561 - 1482583 + F 100 -12.2 -5.01732 | opp_overlap 1482556 1482561 GTTTAGATTAGAAAA GGTATCTATT TGA AATAGATACC TTTTTTAGACGAATT TERM 1538 1483892 - 1483874 - g 100 -7.6 -5.9667 | opp_overlap 1483874 1483873, overlap 1483885 AAAAATATAAAAAAA TATTTAGA ATA TCTAAATA GTGATTTTTAGACTG CD1276 1482608 - 1483903 + | recombination factor protein RarA TERM 1539 1484195 - 1484174 - g 78 -10.3 -2.59431 | opp_overlap 1484171, overlap 1484170 GGTTTTTATAATCTA CTTCGTAAT ACTA ATTACGAAG AAATATCTGGGAAAA CD1277 1483934 - 1484704 + | putative acetyltransferase CD1278 1484813 - 1485259 + | transcriptional regulator iscS2 1485277 - 1486470 + | cysteine desulfurase CD1280 1486524 - 1486964 + | NifU-like protein TERM 1540 1487024 - 1487076 + F 93 -11.7 -3.29187 | opp_overlap 1487025 1487040, overlap 1487028 1487040 1487071 AGTACTAATGATATA ATTAGGACATAAAAAATAGCTGTTT TTA AAATAGCTATTTTTTATTGCCTAAA TTAAGTATTTTAACT TERM 1541 1487075 - 1487025 - f 95 -13 -3.61404 | opp_overlap 1487024 1487028 1487040 1487071, overlap 1487040 GTACTAATGATATAA TTAGGACATAAAAAATAGCTGTTT TTA AAATAGCTATTTTTTATTGCCTAA ATTAAGTATTTTAAC TERM 1542 1487028 - 1487072 + F 88 -12.5 -2.58183 | opp_overlap 1487025 1487040, overlap 1487024 1487040 1487071 CTAATGATATAATTA GGACATAAAAAATAGCTGTTT TTA AAATAGCTATTTTTTATTGCC TAAATTAAGTATTTT TERM 1543 1487060 - 1487040 - f 81 -5.5 -5.39721 | opp_overlap 1487028 1487024 1487040, overlap 1487025 TTAGGACATAAAAAA TAGCTGTTT TTA AAATAGCTA TTTTTTATTGCCTAA TERM 1544 1487040 - 1487060 + F 100 -7.7 -5.4833 | opp_overlap 1487040 1487025, overlap 1487028 1487024 TTAGGACATAAAAAA TAGCTGTTT TTA AAATAGCTA TTTTTTATTGCCTAA TERM 1545 1487695 - 1487685 - g 82 -5.4 -5.41143 | TATTTGCTAAAAAAA TCTG TTA CAGA TAAAAAAGACCAAAC trmU 1487247 - 1488332 + | putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1546 1488678 - 1488660 - f 74 -9 -3.02043 | opp_overlap 1488662, overlap 1488662 AAGGTTTTCCGAAGA TATCATAC TTT GTATGATA ATTAGGGTGGTACCG TERM 1547 1488701 - 1488734 + F 100 -16.9 -5.63517 | TGGTACCGCGATTGT CCTCGCCCCTATAAA TTTA TTTATAGGGACGAGG TTTTTTATTTAAACG TERM 1548 1490029 - 1490014 - g 70 -6.2 -4.05607 | ATATTAGAAGAAGAA CATCTA TCTG TAGATG AAGAAGCTTTTAATG alaS 1488781 - 1491420 + | alanyl-tRNA synthetase TERM 1549 1491586 - 1491550 - g 76 -6.1 -4.63527 | gap 1, opp_overlap 1491550 1491558, overlap 1491558 GCATTAGTTGAAAAA GGATATAACCCTATAA ATCAAA TTATAGGG-TATCTCC TTTCTGGTGATTCTA TERM 1550 1491579 - 1491558 - g 71 -7.4 -3.72037 | opp_overlap 1491550 1491558, overlap 1491550 TGAAAAAGGATATAA CCCTATAA ATCAAA TTATAGGG TATCTCCTTTCTGGT CD1283 1491445 - 1491702 + | hypothetical protein CD1284 1491712 - 1493883 + | hypothetical protein TERM 1551 1493921 - 1493975 + F 100 -8.9 -5.00765 | opp_overlap 1493922, overlap 1493922 1493956 GGATTTAAATAAAAA ATGCAATATGATTATTAATGTAAAC TGGAT GCTTACATAAAAAATCATATTGCAA TTTTTATGATTGATT TERM 1552 1493922 - 1493974 + F 95 -12.4 -3.58832 | opp_overlap 1493922, overlap 1493921 1493956 GATTTAAATAAAAAA TGCAATATGATTATTAATGTAAAC TGGAT GCTTACATAAAAAATCATATTGCA ATTTTTATGATTGAT TERM 1553 1493974 - 1493922 - f 100 -14.6 -5.65927 | opp_overlap 1493922 1493921 1493956 GATTTAAATAAAAAA TGCAATATGATTATTAATGTAAAC TGGAT GCTTACATAAAAAATCATATTGCA ATTTTTATGATTGAT CD1285 1494089 - 1494514 + | putative holliday junction resolvase CD1286 1494592 - 1494879 + | hypothetical protein fur 1495161 - 1495619 + | ferric uptake regulation protein TERM 1554 1495641 - 1495684 + T 100 -15 -5.55769 | opp_overlap 1495646 1495649 ATTGCTTAATGTCGA TGGAAGAATAGTATAGAA CTTTTATA TTCTATGCTATTCTTCCA TTTTTTATTATAAAC CD1288 1496473 - 1495736 - | putative membrane-bound metal-dependent hydrolase TERM 1555 1497611 - 1497591 - g 70 -6.1 -4.03888 | opp_overlap 1497593, overlap 1497592 TAGTGATAATAACAA CTGGTTCAC AAG GTGAACCTA TGTCAGCTCTTGCTA TERM 1556 1497593 - 1497609 + G 83 -10.9 -2.91735 | opp_overlap 1497592 1497591 GTGATAATAACAACT GGTTCAC AAG GTGAACC TATGTCAGCTCTTGC CD1289 1496690 - 1498366 + | metallo beta-lactamase superfamily protein CD1290 1498573 - 1498773 + | putative small acid-soluble spore protein dacF 1498827 - 1499990 + | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein) TERM 1557 1500053 - 1500083 + T 90 -7.1 -5.28942 | gap 1, opp_overlap 1500053 AATACACATAAAAAA TACCCTTAT-GTAA TTAT TTACCATAGGGGTA TTTTTATTTACCATA TERM 1558 1500083 - 1500053 - T 79 -4.9 -5.46276 | gap 1, opp_overlap 1500053 AATACACATAAAAAA TACCCTTAT-GTAA TTAT TTACCATAGGGGTA TTTTTATTTACCATA CD1292 1500623 - 1500201 - | hypothetical protein CD1293 1501480 - 1500644 - | AraC family transcription regulator TERM 1559 1500787 - 1500799 + g 77 -4.9 -5.25805 | overlap 1500792 1500793 CTATAGGTTCTACGC CTTTT TCT AAAAG TTTTTTAGCTTTGTT TERM 1560 1501580 - 1501615 + H 77 -8 -4.11692 | gap 1, opp_overlap 1501585 1501587 GTCAATTCATGTCAA TATAAT-ATTACACTTA CAG TAGGTGTAATTATTATA TTTTCACAATGAATA CD1294 1501778 - 1502374 + | putative membrane-associated peptidase scpA 1502404 - 1503123 + | segregation and condensation protein A scpB 1503125 - 1503664 + | segregation and condensation protein B TERM 1561 1503959 - 1503948 - g 74 -3 -5.37043 | opp_overlap 1503948 AGCTGATATAAAAAA CAAA GATA TTTG TTTAAAGCTTAATAT CD1297 1503826 - 1504455 + | hypothetical protein CD1298 1504439 - 1504837 + | hypothetical protein TERM 1562 1504874 - 1504909 + F 75 -8.5 -3.6471 | opp_overlap 1504878 1504879 1504881, overlap 1504879 GTATATAGTTTTAAG TAAAGTAGTGGGGTT AATATA AATCCCACTATTTTG TTGTGTACTTTAAAC TERM 1563 1504879 - 1504904 + F 88 -8.4 -4.86822 | opp_overlap 1504879 1504878 1504881, overlap 1504874 TAGTTTTAAGTAAAG TAGTGGGGTT AATATA AATCCCACTA TTTTGTTGTGTACTT CD1299 1505085 - 1505525 + | MarR family transcriptional regulator pepA 1505541 - 1506992 + | leucyl aminopeptidase TERM 1564 1507017 - 1507065 + T 100 -10.6 -5.65927 | opp_overlap 1507008 1507017 ATAAAATATAATTTA TAAAGCCACGTGGATATTTTTG TAATT TAAGATTATCTATGTGGCTTTA TTTTTTATTTAAGTA TERM 1565 1507076 - 1507092 + T 76 -2.3 -5.86609 | opp_overlap 1507078, overlap 1507078 CTTTATTTTTTATTT AAGTAAA TTA TTTACTC TTTTTCTTTTTTTCA CD1301 1507751 - 1507083 - | hypothetical protein TERM 1566 1507194 - 1507181 - G 74 -5.3 -4.88295 | opp_overlap 1507181 AAATAAACGTAAAAA TAGCA GTTG TGCTA TGACTTAAAAAACCA CD1301A 1508020 - 1508160 + | hypothetical protein CD1302 1508655 - 1508335 - | putative pyrophosphohydrolase CD1303 1509512 - 1508775 - | NAD-dependent deacetylase acd 1509727 - 1511550 + | putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase TERM 1567 1511570 - 1511610 + F 72 -4.9 -5.06505 | TAAATAAAAAATATA GACTATGGGTAGTTTTCAT TTT ATTTAAATTATCTATAGTC TTTTTGTATATAATT TERM 1568 1512769 - 1512759 - g 79 -5.4 -5.2422 | AATCAGAGGAAAAAA GAGT AGA ACTC CATGCACATACACAA TERM 1569 1515119 - 1515107 - g 76 -7.7 -4.0162 | opp_overlap 1515105 1515107 CCTTTAGATGATAAA GAGAC TAT GTCTC TATTTACATCTACAG TERM 1570 1515107 - 1515119 + G 71 -7.7 -3.43773 | opp_overlap 1515107, overlap 1515105 CCTTTAGATGATAAA GAGAC TAT GTCTC TATTTACATCTACAG TERM 1571 1515886 - 1515861 - g 71 -3.3 -5.31275 | overlap 1515863 TTGTAGGAGAAAAAA CATTACTTCCA CCAA TGGCAGCAATA CAAGGTCTTGGAGGA dnaF 1511765 - 1516063 + | DNA polymerase III PolC-type TERM 1572 1516140 - 1516162 + F 93 -7.8 -5.11836 | opp_overlap 1516136 1516140 CTTTGCAGAAACTAA GAGTGAGA CAGCTGT TCTCACTC TTTTATTTTAAATAT TERM 1573 1516162 - 1516140 - f 72 -7.8 -3.6053 | opp_overlap 1516140, overlap 1516136 CTTTGCAGAAACTAA GAGTGAGA CAGCTGT TCTCACTC TTTTATTTTAAATAT CD1306 1516267 - 1516728 + | hypothetical protein TERM 1574 1517032 - 1517016 - g 70 -8.1 -3.09896 | opp_overlap 1517016, overlap 1517015 GCTAGAGAGATAAAC CCTAATT ATG AATTAGG TGATATTATAGAACA nusA 1516758 - 1517912 + | transcription elongation protein CD1307A 1517919 - 1518200 + | hypothetical protein CD1308 1518190 - 1518501 + | putative ribosomal protein infB 1518523 - 1520463 + | translation initiation factor IF-2 rbfA 1520506 - 1520886 + | ribosome-binding factor A TERM 1575 1520918 - 1520938 + GF 74 -9.1 -2.8655 | opp_overlap 1520910, overlap 1520923 AACTATATTTATGAG GGTGACTAT TTT ATAGTTACC TCTCATATCAGTCCA TERM 1576 1521564 - 1521583 + GF 73 -8.6 -3.18582 | overlap 1521554 AAATAGTTACGCACA CTCGTGAC TTTA GTCATGAG TTAGTAGCTAAAATA TERM 1577 1522477 - 1522466 - g 74 -3 -5.38951 | AATGCATATAAAAAA TTCT TTAA AGAA AAGGCAGGATTTCCT TERM 1578 1522814 - 1522798 - g 73 -5.9 -4.54449 | AGACTTTATAGAAAA TCCTAAG TAT CTTAAGA AGTCATTAAACAAGC tlpB 1522193 - 1523311 + | transposase-like protein B TERM 1579 1523338 - 1523324 - gf 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG CD1311 1520876 - 1523734 + | putative RNA-binding protein truB 1523747 - 1524652 + | tRNA pseudouridine synthase B TERM 1580 1524721 - 1524671 - f 78 -4.4 -5.47821 | gap 1, opp_overlap 1524674 1524679 1524720, overlap 1524674 1524679 ATGTATTTAAAAAAA CAACAAAAGAGATAGTACTATAA TAACTT CTATAGT-CTATCTCTTTTACTT ATGCTATAATAGTTT TERM 1581 1524718 - 1524674 - f 88 -8.3 -4.8236 | gap 1, opp_overlap 1524674 1524679, overlap 1524671 1524679 TATTTAAAAAAACAA CAAAAGAGATAGTACTATAA TAACTT CTATAGT-CTATCTCTTTTA CTTATGCTATAATAG TERM 1582 1524713 - 1524679 - f 80 -6 -5.25154 | gap 1, opp_overlap 1524674 1524679, overlap 1524674 1524671 AAAAAAACAACAAAA GAGATAGTACTATAA TAACTT CTATAGT-CTATCTC TTTTACTTATGCTAT ribC 1524783 - 1525712 + | riboflavin biosynthesis protein CD1315A 1525712 - 1525810 + | hypothetical protein rpsO 1525816 - 1526073 + | 30S ribosomal protein S15 TERM 1583 1526079 - 1526127 + F 100 -14.3 -3.45118 | opp_overlap 1526093, overlap 1526093 AAGAAAGTAATTTTA TTCTTTATAAAAAAGCAGGTATA GTG TATACCTGCTTTTTTATAGTTAA TTCATTATAAAGTAA TERM 1584 1526113 - 1526093 - f 100 -12.7 -5.24531 | opp_overlap 1526079 1526093 ATTCTTTATAAAAAA GCAGGTATA GTG TATACCTGC TTTTTTATAGTTAAT TERM 1585 1526093 - 1526113 + F 100 -12.7 -5.38249 | opp_overlap 1526093, overlap 1526079 ATTCTTTATAAAAAA GCAGGTATA GTG TATACCTGC TTTTTTATAGTTAAT CD1317 1526313 - 1527158 + | hypothetical protein comR 1527283 - 1529394 + | polynucleotide phosphorylase/polyadenylase TERM 1586 1529413 - 1529432 + F 83 -7.2 -5.08824 | opp_overlap 1529413 1529408 ATTATATAATTAAAA GCAAAGTC TTAG GATTTTGC TTTTTTAAATACAAA TERM 1587 1529937 - 1529925 - g 81 -4.9 -5.43553 | opp_overlap 1529925 ACTTAAAAAAGAAAA TGTAA AGA TTACA TTTAATGTGACTGGA CD1319 1529662 - 1530405 + | putative polysaccharide deacetylase CD1320 1530563 - 1531810 + | putative peptidase CD1321 1531845 - 1532090 + | hypothetical protein dapG 1532100 - 1533323 + | aspartate kinase I tepA 1533436 - 1534170 + | translocation-enhancing protein TepA TERM 1588 1534227 - 1534244 + F 70 -4.9 -4.8048 | AAAGTAGGAGTGTTA GTGTTAA GGCA TTAGCAC TTTTTGCTGTGAAGG TERM 1589 1535257 - 1535245 - g 78 -3.4 -5.51046 | opp_overlap 1535245 TAAATATAGAAAAAA CTCA ACCTA TGAG TATTGTAGCAGAGCC ftsK 1534293 - 1536704 + | putative DNA translocase CD1325 1536707 - 1537765 + | tRNA 2-selenouridine synthase CD1326 1537759 - 1539093 + | radical SAM-superfamily protein pgsA 1539080 - 1539622 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1590 1539723 - 1539701 - f 100 -7.8 -5.30575 | opp_overlap 1539701 1539702, overlap 1539702 TAAAAATGTAAAAAA GGGTATACTA TTA TAGTATACCT CTTTTCATTTTAAGA TERM 1591 1539701 - 1539724 + F 83 -7.6 -4.67038 | gap 1, opp_overlap 1539701 1539702, overlap 1539702 TAAAAATGTAAAAAA G-GGTATACTA TTA TAGTATACCTC TTTTCATTTTAAGAA TERM 1592 1539722 - 1539702 - f 95 -11.3 -3.75905 | opp_overlap 1539701 1539702, overlap 1539701 AAAAATGTAAAAAAG GGTATACTA TTA TAGTATACC TCTTTTCATTTTAAG TERM 1593 1539702 - 1539722 + F 100 -11.3 -3.94465 | opp_overlap 1539702 1539701, overlap 1539701 AAAAATGTAAAAAAG GGTATACTA TTA TAGTATACC TCTTTTCATTTTAAG recA 1539910 - 1540956 + | RecA protein (recombinase A) TERM 1594 1541253 - 1541229 - g 88 -7.9 -4.87291 | TATCTGAAGCAAAAA TTGGACAAGCT GAA AACTTGGCCAA AGAAATAATAGATAA TERM 1595 1541455 - 1541443 - g 71 -4.9 -4.70046 | TAGAAAATTACAAAA TTTAG AAT CTAAA GAAGTAAACCTAAGT TERM 1596 1541750 - 1541736 - g 77 -8.6 -3.61356 | ATCACGTAGCCGAAA CTACTG TAA CAGTAG TAAGCTTGCCTAATG CD1329 1541111 - 1542673 + | putative nucleic acid-binding protein TERM 1597 1542723 - 1542752 + F 100 -14.5 -4.39407 | opp_overlap 1542721 1542714 TAGAAATTTAAATTT GCCACAAGATATG ATAA TATATCTTGTGGC TTTTAAATTGTTTAA TERM 1598 1542993 - 1543024 + F 72 -5.2 -4.95854 | opp_overlap 1542993 1542988 AGATTATAAATAAAA CCTGCTAATGAAAA TAGA TTATTTTTAGCAGG TTTTTAAATTTTTTA TERM 1599 1543174 - 1543153 - f 70 -7.5 -3.3573 | opp_overlap 1543173, overlap 1543156 GAAAGTATTCTATAA CAATAAATA TCTA TATTTATTG CAAAATTATTTTAGC CD1330 1543308 - 1545089 + | hypothetical protein TERM 1600 1545120 - 1545166 + T 80 -6.2 -5.2422 | gap 1, opp_overlap 1545123, overlap 1545123 AATTTAAGAAAATAA AAAGAGACTGAGATTTGTAAA ATAAAC TTTACCAAT-TCAGTCTCTTA TTTTTTAGTCTACTT TERM 1601 1545123 - 1545163 + T 83 -7.9 -4.69962 | gap 1, opp_overlap 1545123, overlap 1545120 TTAAGAAAATAAAAA GAGACTGAGATTTGTAAA ATAAAC TTTACCAAT-TCAGTCTC TTATTTTTTAGTCTA TERM 1602 1545163 - 1545123 - T 100 -8.6 -5.62288 | gap 1, opp_overlap 1545123 1545120 TTAAGAAAATAAAAA GAGACTGAGATTTGTAAAA TAAA CTTTACCAAT-TCAGTCTC TTATTTTTTAGTCTA sip3 1545701 - 1545171 - | signal peptidase I bacA1 1546565 - 1545741 - | undecaprenyl-diphosphatase xerD2 1546822 - 1547730 + | putative tyrosine recombinase TERM 1603 1548134 - 1548111 - g 78 -6.1 -4.69512 | AAAATAGAAAAAGAA GTAAGACAT GATGTA ATGTCTCAC GTAAAAGCTTATGGT CD1334 1547874 - 1549319 + | adenylosuccinate lyase TERM 1604 1549348 - 1549377 + F 100 -10.9 -4.26903 | opp_overlap 1549348 1549349 1549372, overlap 1549349 AAATATAATTAAAAA CGGCTATCTTATT TATA AATAAGATAGCCA TTTTAATGGGCTAGC TERM 1605 1549377 - 1549348 - f 100 -13.1 -5.00412 | opp_overlap 1549348 1549349, overlap 1549349 1549372 AAATATAATTAAAAA CGGCTATCTTATT TATA AATAAGATAGCCA TTTTAATGGGCTAGC TERM 1606 1549349 - 1549376 + F 100 -14.4 -3.1582 | opp_overlap 1549349 1549348 1549372, overlap 1549348 AATATAATTAAAAAC GGCTATCTTATT TATA AATAAGATAGCC ATTTTAATGGGCTAG TERM 1607 1549376 - 1549349 - f 100 -14.4 -3.57807 | opp_overlap 1549348 1549349, overlap 1549348 1549372 AATATAATTAAAAAC GGCTATCTTATT TATA AATAAGATAGCC ATTTTAATGGGCTAG TERM 1608 1549398 - 1549417 + F 71 -6.4 -4.15884 | overlap 1549410 1549412 ATGGGCTAGCGTCTT CTCTCCAC CGCT GTGAAGAG TTCTTCTTTACTTAC CD1335 1549630 - 1550082 + | MarR family transcriptional regulator TERM 1609 1550774 - 1550752 - g 86 -9.2 -3.90744 | opp_overlap 1550750 1550749 1550744 1550752 1550757 1550758, overlap 1550758 GGTCTTGCTAAAGAA GAAAAAGCAG TTT CTGCATTTTC TGGTTTTGTTGGTTA TERM 1610 1550752 - 1550774 + G 78 -9.2 -3.29332 | opp_overlap 1550752 1550758, overlap 1550750 1550749 1550744 1550757 1550758 GGTCTTGCTAAAGAA GAAAAAGCAG TTT CTGCATTTTC TGGTTTTGTTGGTTA TERM 1611 1550768 - 1550758 - g 89 -6.8 -5.38549 | opp_overlap 1550757 1550752 1550750 1550749 1550744 1550758, overlap 1550752 GCTAAAGAAGAAAAA GCAG TTT CTGC ATTTTCTGGTTTTGT malX 1550494 - 1552071 + | PTS system, maltose and glucose-specific IIBC component TERM 1612 1552086 - 1552114 + F 100 -8.3 -5.34555 | opp_overlap 1552081 1552086 1552088 AAGTAAATATTAAAA GGCAATACTAATT TAT AATTTGTATTGTC TTTTTTGTAGTATAA TERM 1613 1552114 - 1552086 - f 72 -6.1 -4.52266 | opp_overlap 1552086, overlap 1552081 1552088 AAGTAAATATTAAAA GGCAATACTAATT TAT AATTTGTATTGTC TTTTTTGTAGTATAA CD1337 1552219 - 1552971 + | transcriptional regulator TERM 1614 1553165 - 1553177 + G 70 -6.3 -4.05033 | overlap 1553150 GTACTTGGACTCCAG GACTT TTA AAGTC TTTATGTAAAATGAG TERM 1615 1554225 - 1554243 + G 71 -6 -4.3739 | ACCGAGACCTTTACA TGTAGGTA ATA TACCAACA TTTTATAAGGGACTG glvG 1553110 - 1554450 + | maltose-6'-phosphate glucosidase TERM 1616 1554488 - 1554522 + T 100 -11.6 -4.614 | opp_overlap 1554488 ATATTAATTAAGAAA TGTCCCCTTTTCAAAT AAT ATCTGAAAAGAGGACA TTTTATATCATTAAA TERM 1617 1554522 - 1554488 - T 100 -16 -4.35339 | opp_overlap 1554488 ATATTAATTAAGAAA TGTCCCCTTTTCAAAT AAT ATCTGAAAAGAGGACA TTTTATATCATTAAA CD1339 1555758 - 1554562 - | aspartate aminotransferase CD1340 1556143 - 1557093 + | putative galactose-1-phosphate uridylyltransferase exoA 1557253 - 1558005 + | putative exodeoxyribonuclease CD1342 1558759 - 1558097 - | putative exonuclease TERM 1618 1560170 - 1560153 - g 71 -2.1 -5.37345 | gap 1, opp_overlap 1560153, overlap 1560157 TGGAAGTATAAAAAA TCTATTTG CTC CAAA-AGA TTTAAAAGAAGATTA glnA 1559188 - 1561086 + | glutamine synthetase CD1344 1562335 - 1561214 - | putative cell wall biosynthesis protein TERM 1619 1561280 - 1561295 + g 86 -3.4 -5.86061 | TGGATGAATGACTGT TTTAAA TTCT TTTAAA TTTTTTTTCATAAAG CD1345 1562534 - 1562866 + | PadR-family transcriptional regulator CD1346 1562853 - 1563935 + | hypothetical protein TERM 1620 1564584 - 1564608 + G 71 -6.6 -3.94409 | opp_overlap 1564588 ATCAGAGTCATTGTA TATATCTTCA GAGAA TGAAGATGTA TTTATCAATAATATA CD1347 1563928 - 1564998 + | hypothetical protein CD1348 1565100 - 1565636 + | putative lipoprotein TERM 1621 1565625 - 1565679 + F 90 -10.7 -3.35283 | gap 2, opp_overlap 1565619 1565642, overlap 1565642 AATGGAAAATTAATA GAATT--AAGATAAAAAAAGATGTGTT TTT AACACATCTTTTTTTGTTTTTTAATTC TTATAAAATCCTTAT TERM 1622 1565660 - 1565642 - f 100 -10.4 -5.82172 | opp_overlap 1565625 1565642 ATTAAGATAAAAAAA GATGTGTT TTT AACACATC TTTTTTTGTTTTTTA TERM 1623 1565642 - 1565660 + F 100 -10.4 -6.28401 | opp_overlap 1565642, overlap 1565625 ATTAAGATAAAAAAA GATGTGTT TTT AACACATC TTTTTTTGTTTTTTA CD1349 1565752 - 1566459 + | putative lantibiotic ABC transporter,ATP-binding protein CD1350 1566461 - 1567177 + | putative lantibiotic ABC transporter, permease protein CD1351 1567179 - 1567937 + | putative lantibiotic ABC transporter, permease protein CD1352 1568072 - 1569460 + | lantibiotic two-component sensor histidine kinase TERM 1624 1569467 - 1569524 + T 100 -9.7 -5.59564 | gap 1, opp_overlap 1569468, overlap 1569468 ATAGTTTAGTAAATA ATATCCATTTTGTAAATACCTA-AATTT TAT GATTTATAGGTATTTATAAAATGGATAG TTTTTTTGACTTTAT TERM 1625 1569523 - 1569468 - T 95 -10.3 -4.00756 | gap 1, opp_overlap 1569467 1569468 TAGTTTAGTAAATAA TATCCATTTTGTAAATACCTA-AATT TTATG ATTTATAGGTATTTATAAAATGGATA GTTTTTTTGACTTTA TERM 1626 1569468 - 1569523 + T 100 -13.2 -3.93298 | gap 1, opp_overlap 1569468, overlap 1569467 TAGTTTAGTAAATAA TATCCATTTTGTAAATACCTA-AATTT TAT GATTTATAGGTATTTATAAAATGGATA GTTTTTTTGACTTTA CD1353 1570357 - 1569536 - | putative pyridoxine kinase CD1354 1570608 - 1571762 + | hypothetical protein cspB 1571945 - 1572145 + | putative cold shock protein TERM 1627 1572208 - 1572191 - f 80 -9.9 -2.77936 | opp_overlap 1572191, overlap 1572185 1572190 AATATGAGAGATAAG CCGCTAA TCAT TTAGCGG TTTTTTCAGTTTTTG TERM 1628 1572191 - 1572208 + F 100 -9.9 -5.30575 | opp_overlap 1572185 1572190 1572191 AATATGAGAGATAAG CCGCTAA TCAT TTAGCGG TTTTTTCAGTTTTTG TERM 1629 1572281 - 1572269 - f 74 -4.9 -5.14626 | ATTATTAAAATAAAA TCATT AAT AATGA GATAAATATGTTAAA TERM 1630 1572540 - 1572515 - f 72 -7.9 -3.54575 | opp_overlap 1572515 1572514, overlap 1572513 TGCAAAAAAGTAACA TTATAAATATT GAGT AATATTTATAA GTTTTCAGTAACGGT CD1356 1572524 - 1572994 + | putative regulatory protein TERM 1631 1573114 - 1573080 - T 95 -8.1 -5.09762 | gap 1, opp_overlap 1573080 ACTTTAATATAAAAA GCTGTCTTTTC-TAAT AAAT ATTGTGAAAAGACAGC TTTTTTATATATGAC TERM 1632 1573080 - 1573114 + T 100 -10.3 -5.4251 | gap 1, opp_overlap 1573080 ACTTTAATATAAAAA GCTGTCTTTTC-TAAT AAAT ATTGTGAAAAGACAGC TTTTTTATATATGAC CD1357 1573892 - 1573137 - | putative peptidyl-prolyl isomerase TERM 1633 1573757 - 1573769 + g 81 -2.7 -5.71638 | overlap 1573744 CTTGATTCACTAAAT CATTT AAT AAGTG TTTTTTTCCTTCTTC CD1358 1574429 - 1574013 - | hypothetical protein CD1359 1575099 - 1574593 - | putative phage-related protein TERM 1634 1574892 - 1574878 - G 74 -8.6 -3.23715 | ATAATCGTTATAAGA GGATAC ATA GTATCC AAGGCTAGTGAAATG CD1360 1575501 - 1575181 - | putative phage repressor CD1360A 1575670 - 1575867 + | putative phage regulatory protein CD1361 1575972 - 1576412 + | hypothetical protein TERM 1635 1576725 - 1576714 - g 83 -3 -5.76949 | opp_overlap 1576714 1576717 GATTCTCAAAAAAAA CTTT ACTG AAAG TATTTTTATTGATGA TERM 1636 1576717 - 1576727 + G 72 -4 -5.15167 | opp_overlap 1576714, overlap 1576714 TCTCAAAAAAAACTT TACT GAA AGTA TTTTTATTGATGATG TERM 1637 1576751 - 1576770 + G 90 -6.4 -5.65177 | GATGATGAAAGTGTG CAAGGCTC TGAA GGGTCTTG TTTTTTTGTAAGTAT CD1362 1576661 - 1577104 + | hypothetical protein CD1363 1577109 - 1578173 + | hypothetical protein CD1364 1578187 - 1578615 + | hypothetical protein CD1365 1578741 - 1579187 + | hypothetical protein TERM 1638 1579306 - 1579274 - g 82 -8.6 -3.98083 | gap 1, opp_overlap 1579285 TATGCAATGGATAAA GGCGAATTAAAGCTT ATTG AAGCTTTT-TTCGCC TTAGAAATTGAGGAA TERM 1639 1579285 - 1579296 + G 72 -4.4 -5.09426 | opp_overlap 1579274 TAAAGGCGAATTAAA GCTT ATTG AAGC TTTTTTCGCCTTAGA CD1365A 1579214 - 1579381 + | hypothetical protein TERM 1640 1579842 - 1579824 - g 71 -3.2 -5.27769 | AGAAAAAACTAAAAA TAAATTAC TTG GAAATTTA AAAAAGATTGGTGGC CD1366 1579381 - 1581834 + | hypothetical protein CD1367 1581834 - 1582256 + | hypothetical protein CD1368 1582538 - 1584067 + | putative phage cell wall hydrolase CD1369 1584083 - 1584409 + | hypothetical protein CD1370 1584409 - 1584837 + | phage protein CD1371 1584830 - 1585882 + | phage protein TERM 1641 1586165 - 1586147 - g 80 -6.1 -4.91712 | TTGAAGTTATAAAAA GTATATG TGAGG CATATAC AAAATCAGAAACAGA TERM 1642 1586217 - 1586251 + G 74 -6.7 -4.33151 | gap 1 ATTTACATTCGTATT GAGTTTTATAG-CAAA TAAC TGTGACTATAAAACTC TTTTAGATTGTAGTG CD1372 1585879 - 1586577 + | phage protein TERM 1643 1586997 - 1586973 - g 73 -8.7 -3.14963 | TTTACAATTATCCAA TACTTCAAATG TTA CATTAGAAGTA GACCCGACGTTGGTT CD1373 1586578 - 1587564 + | putative phage tail fiber protein TERM 1644 1591802 - 1591781 - g 72 -6.7 -4.1523 | CTGAATTACAAAGAA TTACAACTA TATC TAGCTGTAA AGAAGTACATTGTGG CD1374 1587586 - 1592817 + | hypothetical protein CD1375 1593068 - 1593187 + | putative phage-related protein TERM 1645 1593199 - 1593215 + F 86 -3.8 -6.02914 | opp_overlap 1593199 ATAGTAAATTTAGAA TAACTA TGTAT TAGTTA TTTTTTTTATGTAAA TERM 1646 1593228 - 1593269 + F 70 -2.6 -5.5074 | gap 2, opp_overlap 1593231, overlap 1593231 TTATTTTTTTTATGT AAAGTACAAGGTCTTAACTT TAAT AAGT-AAG-CTTTGTACTTA TTTTTTGTTACATTA CD1376 1593450 - 1593710 + | hypothetical protein TERM 1647 1593855 - 1593903 + T 100 -8.5 -6.11243 | gap 1, opp_overlap 1593855 ATAAAAATTAAAAAA GGAGTTGAGCTTAAATTTGATT AGAAAA AATCAATTTTAAGG-CAACTCC TTTTTTTTATTAAAT TERM 1648 1593903 - 1593855 - T 100 -8.5 -5.56112 | gap 1, opp_overlap 1593855 ATAAAAATTAAAAAA GGAGTTGAGCTTAAATTTGATT AGAAAA AATCAATTTTAAGG-CAACTCC TTTTTTTTATTAAAT CD1377 1594373 - 1593918 - | hypothetical protein CD1378 1595020 - 1594601 - | putative phage regulatory protein CD1378A 1595319 - 1595528 + | putative phage regulatory protein CD1378B 1595548 - 1595769 + | hypothetical protein CD1379 1596384 - 1595986 - | putative phage regulatory protein CD1380 1599309 - 1596805 - | putative transporter TERM 1649 1597053 - 1597067 + g 72 -4.2 -5.15381 | ATTTTTTTTGCTGTT GCATTG TAT CAAGGC TTTTTTCCATGTCTT CD1381 1599853 - 1599311 - | TetR family transcriptional regulator glpK2 1600097 - 1601611 + | glycerol kinase TERM 1650 1601648 - 1601672 + T 100 -8.7 -5.95946 | opp_overlap 1601648 ATTTGAATTTAAAAA GAGCTTTATGT AAA ATATGAAGCTC TTTTTTTGTTGTTAA CD1383 1602354 - 1601725 - | GntR family transcriptional regulator TERM 1651 1602899 - 1602887 - H 70 -3.5 -5.28281 | ATAAAATAAACAAAA TTTAA AAA TTAAA ACTACTTATTCTATC CD1384 1602942 - 1603733 + | hypothetical protein TERM 1652 1604033 - 1604045 + G 72 -4.1 -5.17353 | TAATACCTGGATTAG GCTAT TTA GTAGC TTTTTTAGTAGCTCT TERM 1653 1604560 - 1604570 + G 76 -6.8 -4.37711 | opp_overlap 1604560 GACCCAGAAAATCCA GCTG CTT CAGC TTTTAAATTTAGTGC CD1385 1603762 - 1604982 + | transporter CD1386 1605002 - 1605697 + | putative allophanate hydrolase subunit 1 CD1387 1605727 - 1606713 + | putative allophanate hydrolase subunit 2 CD1389 1607849 - 1608916 + | putative chloromuconate cycloisomerase CD1390 1608935 - 1610095 + | hypothetical protein CD1391 1610489 - 1612204 + | putative esterase TERM 1654 1612346 - 1612316 - T 78 -6.3 -4.99435 | gap 1, opp_overlap 1612316 1612318 TTCAACAATGAAAAA GAGGCTTATCTC TCTGTTTT GAGAT-AGCCTC CTATAAGCTAAATTG CD1392 1612707 - 1612363 - | putative endoribonuclease TERM 1655 1612547 - 1612524 - G 72 -7.6 -3.57662 | gap 1, opp_overlap 1612530 TTAAATAAATAGTAA CAGAT-AGCAA ATG TTGCTTATCTG AACCATATTTGTTTA TERM 1656 1613146 - 1613156 + G 72 -5.4 -4.78752 | AGAAATCTGGTATCA GCTA TAA TAGC TTTTTGGCTTATCAT CD1393 1612999 - 1613889 + | hypothetical protein TERM 1657 1613990 - 1614021 + F 100 -11.8 -4.87892 | opp_overlap 1613990 TATATTAACTTATAA CAGCAGTTAAAATT GAAA AATTATAACTGCTG TTTCTTTTATTAAAA TERM 1658 1614021 - 1613990 - f 95 -11.8 -3.4439 | opp_overlap 1613990 TATATTAACTTATAA CAGCAGTTAAAATT GAAA AATTATAACTGCTG TTTCTTTTATTAAAA CD1394 1614107 - 1615393 + | putative oxidoreductase TERM 1659 1615422 - 1615383 - T 75 -6.8 -4.43576 | opp_overlap 1615382, overlap 1615386 1615404 AGGAGATAGAAGAAA CTATATTTTAATTAATAA AAAT TTATTAAATAAAATAAAG ATAGATTAAATAATA CD1395 1615925 - 1615482 - | hypothetical protein CD1396 1616743 - 1615949 - | putative amino acid amidase TERM 1660 1617065 - 1617052 - R 73 -2.5 -5.64321 | AGAATAAAAGAAAAA TTTAA TTTA TTAAA ATGCATGAAATGTTT TERM 1661 1617233 - 1617179 - R 100 -11.3 -4.56791 | gap 1, opp_overlap 1617180 1617186 1617188 1617191, overlap 1617188 1617191 AGGGAAAAATAGAAA TTTATTATATAATATTAGGCTGTATT ATAT AATACAGCCTAATATTATATG-TATA TGTGACATAAAATCT TERM 1662 1617186 - 1617227 + r 100 -20.7 -3.05498 | opp_overlap 1617179 1617188 1617191, overlap 1617180 1617188 1617191 AATAGAAATTTATTA TATAATATTAGGCTGTATT ATAT AATACAGCCTAATATTATA TGTATATGTGACATA TERM 1663 1617188 - 1617225 + r 100 -18.9 -3.08197 | opp_overlap 1617179 1617188 1617191, overlap 1617180 1617186 1617191 TAGAAATTTATTATA TAATATTAGGCTGTATT ATAT AATACAGCCTAATATTA TATGTATATGTGACA TERM 1664 1617225 - 1617188 - R 100 -18.9 -2.85446 | opp_overlap 1617180 1617188 1617186 1617191, overlap 1617179 1617191 TAGAAATTTATTATA TAATATTAGGCTGTATT ATAT AATACAGCCTAATATTA TATGTATATGTGACA TERM 1665 1617222 - 1617191 - R 100 -16.2 -3.56562 | opp_overlap 1617188 1617186 1617191, overlap 1617188 1617179 AAATTTATTATATAA TATTAGGCTGTATT ATAT AATACAGCCTAATA TTATATGTATATGTG TERM 1666 1617191 - 1617222 + r 100 -16.2 -3.67967 | opp_overlap 1617191 1617188 1617179, overlap 1617188 1617186 AAATTTATTATATAA TATTAGGCTGTATT ATAT AATACAGCCTAATA TTATATGTATATGTG CD1397 1617785 - 1617309 - | hypothetical protein CD1398 1619064 - 1617886 - | putative peptidase CD1399 1619218 - 1620081 + | putative muramoyltetrapeptide carboxypeptidase CD1400 1620152 - 1620745 + | hypothetical protein TERM 1667 1620853 - 1620803 - T 100 -10.2 -5.63236 | gap 1, opp_overlap 1620803 ACTTAAAAATAAAAA TCGCAATTTA-TTATTCCTTATA AATTTG TATAAGGAATATCTAAACTGCGA TTTTTTATATTGTGA TERM 1668 1620803 - 1620853 + T 100 -8 -5.5208 | gap 1, opp_overlap 1620803 ACTTAAAAATAAAAA TCGCAATTTA-TTATTCCTTATA AATTTG TATAAGGAATATCTAAACTGCGA TTTTTTATATTGTGA CD1401 1621629 - 1620994 - | hypothetical protein glpQ 1622440 - 1621709 - | glycerophosphoryl diester phosphodiesterase TERM 1669 1622654 - 1622684 + H 87 -9.9 -3.30213 | overlap 1622652 TAATAAGTGTAATTT TATGCAAGCTC ATGTTTTTA GAGCTTGCATA TGTATTATTAATATA CD1403 1622771 - 1624960 + | putative nonribosomal peptide synthetase TERM 1670 1624974 - 1625016 + F 95 -9.4 -4.86001 | opp_overlap 1624976 1625013, overlap 1625014 AATTTTTTATTATGA TAGGTGTCATAAAGTGATTT CAG ACATTTCTTTATGACACTTA TTTTTATAAAATAAT CD1404 1625371 - 1627299 + | putative oligopeptide transporter CD1404A 1627286 - 1627633 + | hypothetical protein TERM 1671 1627686 - 1627728 + T 73 -8 -3.66018 | gap 1, opp_overlap 1627693, overlap 1627693 AAATTAGAAGGTAAT TATGAAAGAGGC-TGTCTC AAAATA GAGATAAGCCTCTTTTGTA TTGTTGAAATGATGA TERM 1672 1627693 - 1627721 + T 76 -6.1 -4.79752 | gap 1, opp_overlap 1627693, overlap 1627686 AAGGTAATTATGAAA GAGGC-TGTCTC AAAATA GAGATAAGCCTC TTTTGTATTGTTGAA CD1405 1629794 - 1627875 - | ABC transporter, ATP-binding protein TERM 1673 1628009 - 1628035 + g 74 -6.7 -4.28432 | AATCAGTTGAAAATT TTGCAGTACTT TCATC AAGTGTTGCAA TTTTAGATTCGAGTT TERM 1674 1629595 - 1629607 + g 77 -4.9 -5.29716 | GGTAGATATTCTATC CTAAT ACC ATTAG TTTTTGTTATATTAC CD1406 1630626 - 1629820 - | hypothetical protein TERM 1675 1630688 - 1630661 - R 90 -7.8 -4.96501 | CCTCATAAAAATAAA CTAGGCTAACAA TATT TAGTTAACCTAG AACATTTCATTTATA CD1407 1632133 - 1630685 - | GntR family transcriptional regulator TERM 1676 1631457 - 1631472 + g 71 -4.8 -4.84761 | CCTAAGATATTGAGG TTATGA GATT TCATAA TTTTTATAGCAGTAT TERM 1677 1631758 - 1631745 - G 72 -6.7 -4.16842 | TCCATGTCGAATAAA TCTCC ATCT GGAGA AATACTTTTAAAGGA TERM 1678 1632001 - 1632032 + g 76 -8.8 -3.52459 | opp_overlap 1632007, overlap 1632004 1632007 TAACTTGTAAAAGCT GACTAAGCTCCCTT GTAG AAGGGAGCTTACTA TTGTCTGGAATTAGT TERM 1679 1632004 - 1632029 + g 100 -14.9 -2.59565 | opp_overlap 1632007, overlap 1632001 1632007 CTTGTAAAAGCTGAC TAAGCTCCCTT GTAG AAGGGAGCTTA CTATTGTCTGGAATT TERM 1680 1632026 - 1632007 - G 100 -12.2 -3.21938 | opp_overlap 1632007 1632004 1632001 GTAAAAGCTGACTAA GCTCCCTT GTAG AAGGGAGC TTACTATTGTCTGGA TERM 1681 1632007 - 1632026 + g 100 -12.2 -3.44443 | opp_overlap 1632007, overlap 1632004 1632001 GTAAAAGCTGACTAA GCTCCCTT GTAG AAGGGAGC TTACTATTGTCTGGA ddl 1633056 - 1632157 - | D-alanine--D-alanine ligase CD1409 1633314 - 1634570 + | competence damage-inducible protein A CD1410 1634628 - 1635407 + | putative hydrolase TERM 1682 1635461 - 1635417 - T 83 -6 -5.31877 | gap 1, opp_overlap 1635412 1635417 AGTTAGTATAAAAAA TGACTGTCCTAGAGAAGTATA AAAT TATA-TTCTATAGAGCAGTCA TTTTAATTATATTCA TERM 1683 1635417 - 1635461 + T 74 -6 -4.56314 | gap 1, opp_overlap 1635417, overlap 1635412 AGTTAGTATAAAAAA TGACTGTCCTAGAGAAGTATA AAAT TATA-TTCTATAGAGCAGTCA TTTTAATTATATTCA CD1411 1636085 - 1635501 - | hypothetical protein CD1412 1637715 - 1636285 - | sigma-54 dependent regulatory protein CD1413 1638033 - 1638977 + | hypothetical protein TERM 1684 1639055 - 1639031 - T 83 -7.3 -5.09204 | opp_overlap 1639002 1639036, overlap 1639034 AGAGTCCAACAAAAA TTATACCAAAT TAT ATTTGGTATTA AAAAATAACTATTTA TERM 1685 1639052 - 1639034 - T 77 -9 -3.39061 | opp_overlap 1639002 1639036, overlap 1639031 GTCCAACAAAAATTA TACCAAAT TAT ATTTGGTA TTAAAAAATAACTAT TERM 1686 1639125 - 1639135 + T 75 -4 -5.62045 | TAAGTAGATACAGTT TAGA CTA TCTA TTTTTTATTATATAT TERM 1687 1639191 - 1639240 + T 71 -5.3 -4.66537 | opp_overlap 1639194 1639197, overlap 1639194 TGTTTTGTAAATACT AAATAACTATAGAAAGGACTATA TTTA TATAACCATTTCTATAGTTATTA TTTTGTATTAAACAA TERM 1688 1639194 - 1639237 + T 77 -7 -4.44211 | opp_overlap 1639194 1639197, overlap 1639191 TTTGTAAATACTAAA TAACTATAGAAAGGACTATA TTTA TATAACCATTTCTATAGTTA TTATTTTGTATTAAA TERM 1689 1639237 - 1639194 - T 100 -11.4 -4.00532 | opp_overlap 1639191 1639194, overlap 1639197 TTTGTAAATACTAAA TAACTATAGAAAGGACTATA TTTA TATAACCATTTCTATAGTTA TTATTTTGTATTAAA TERM 1690 1639234 - 1639197 - T 82 -8.7 -4.12133 | opp_overlap 1639194 1639191, overlap 1639194 GTAAATACTAAATAA CTATAGAAAGGACTATA TTTA TATAACCATTTCTATAG TTATTATTTTGTATT CD1414 1640183 - 1639248 - | putative radical SAM-superfamily protein TERM 1691 1640326 - 1640280 - R 100 -18.5 -3.24825 | opp_overlap 1640286, overlap 1640286 1640309 CTATTTTAAGTAATA TAAAAATACAGCGAGAAAATA ATTAA TATTTTCTCGCTGTATTTCCA GAGAAAAATAGAACT TERM 1692 1640286 - 1640320 + r 100 -17.5 -3.53091 | opp_overlap 1640280 1640286 1640309 TAAGTAATATAAAAA TACAGCGAGAAAATA ATTAA TATTTTCTCGCTGTA TTTCCAGAGAAAAAT TERM 1693 1640320 - 1640286 - R 100 -17.5 -5.1485 | opp_overlap 1640286, overlap 1640280 1640309 TAAGTAATATAAAAA TACAGCGAGAAAATA ATTAA TATTTTCTCGCTGTA TTTCCAGAGAAAAAT CD1415 1640850 - 1640302 - | hypothetical protein CD1416 1641002 - 1641430 + | hypothetical protein CD1417 1641497 - 1642165 + | putative ATP-binding protein CD1418 1643638 - 1642283 - | putative drug/sodium antiporter CD1418A 1644570 - 1643975 - | putative integrase (partial) TERM 1694 1644860 - 1644850 - g 84 -6.8 -5.25735 | opp_overlap 1644850, overlap 1644851 1644852 TTAAAAAAGTAAAAA GCCA CTC TGGC AGGAGTGACTTTAGT CD1418B 1644762 - 1644914 + | hypothetical protein TERM 1695 1646154 - 1646123 - T 100 -14.8 -3.68024 | opp_overlap 1646123 1646125 1646127 1646131 TGTTTTAAGATAGAA GATACTAATGATAA CTGT TTATCATTAGTATC TGTATGTATATAAAA TERM 1696 1646123 - 1646154 + T 100 -14.8 -3.08197 | opp_overlap 1646123, overlap 1646125 1646127 1646131 TGTTTTAAGATAGAA GATACTAATGATAA CTGT TTATCATTAGTATC TGTATGTATATAAAA TERM 1697 1646125 - 1646152 + T 90 -11.6 -3.09655 | opp_overlap 1646123, overlap 1646123 1646127 1646131 TTTTAAGATAGAAGA TACTAATGATAA CTGT TTATCATTAGTA TCTGTATGTATATAA TERM 1698 1646127 - 1646150 + T 82 -9.8 -3.10057 | opp_overlap 1646123, overlap 1646125 1646123 1646131 TTAAGATAGAAGATA CTAATGATAA CTGT TTATCATTAG TATCTGTATGTATAT CD1419 1648077 - 1646344 - | putative signaling protein TERM 1699 1648222 - 1648196 - R 85 -5.9 -5.4756 | opp_overlap 1648196 1648199, overlap 1648199 AATTTTAACAAAAAA GAACTGAAACA ATATA TGCTTCAGTAC TTAATGTCAATATCT TERM 1700 1648219 - 1648199 - R 76 -6.2 -4.81306 | opp_overlap 1648196 1648199, overlap 1648196 TTTAACAAAAAAGAA CTGAAACA ATATA TGCTTCAG TACTTAATGTCAATA CD1420 1649162 - 1648317 - | putative signaling protein TERM 1701 1648924 - 1648938 + g 72 -2.9 -5.42862 | opp_overlap 1648933 ATCCAATTTGAAATT TTATC ATAAG GATAA TTTTTTTCCCAATCT CD1421 1651427 - 1649193 - | putative signaling protein TERM 1702 1650789 - 1650807 + g 76 -6.1 -4.67256 | AACATGTGATATTTC TGATAAG AACTC CTTATCA TTTTCTAATTTATTG TERM 1703 1652928 - 1652912 - g 80 -6.7 -4.84914 | opp_overlap 1652915 ATTTATAGAAGAAAA CAATTAT AAG ATAATTG CTGACCCTATAGAAA CD1422 1652211 - 1653020 + | MerR family transcriptional regulator TERM 1704 1653064 - 1653111 + F 73 -8 -3.76167 | gap 1, opp_overlap 1653063, overlap 1653063 1653067 AGAATGAAAAAATGT TGATTTGCCACCGATTT-GTCAC TGT GTTATAAAATCGGTAGCAAATTA TATTTTAAATTATAA TERM 1705 1653067 - 1653108 + F 75 -7.5 -3.99228 | gap 1, opp_overlap 1653063, overlap 1653064 1653063 ATGAAAAAATGTTGA TTTGCCACCGATTT-GTCAC TGT GTTATAAAATCGGTAGCAAA TTATATTTTAAATTA CD1423 1653165 - 1653404 + | hypothetical protein CD1424 1653767 - 1653591 - | hypothetical protein TERM 1706 1653824 - 1653803 - R 72 -6 -4.41844 | AAAACTTTCATAAAA CAAAAAGA ACAATA TCTTTTTG GCAACTGGCTGACAT TERM 1707 1654209 - 1654183 - R 74 -5.9 -4.63993 | opp_overlap 1654182, overlap 1654180 AATGGCAAAAAACAA GGGATGAATTT TATAT AGACTCATCCC GTAATTATTTATATA CD1425 1654946 - 1654272 - | hypothetical protein TERM 1708 1655150 - 1655112 - R 74 -9.1 -2.94412 | opp_overlap 1655117, overlap 1655117 TCTAATTTTAAATGA TTAAAGAGCAAGCTTAA ATAAA TCAAACTTGCTCTTTTA ACATAGTGTATGTTT TERM 1709 1655145 - 1655117 - R 81 -9 -3.8901 | opp_overlap 1655117, overlap 1655112 TTTTAAATGATTAAA GAGCAAGCTTAA ATAAA TCAAACTTGCTC TTTTAACATAGTGTA TERM 1710 1655152 - 1655162 + r 72 -4 -5.40464 | AACTTGCTCTTTTAA CATA GTG TATG TTTTTATTTGTGATA TERM 1711 1655391 - 1655409 + r 73 -3.2 -5.60993 | opp_overlap 1655393, overlap 1655393 GCTCATCATTCCACA GATTACTA GAT TAGTAATA TTTTTTTCTCAAGGA CD1428 1656162 - 1655797 - | putative transcriptional regulator TERM 1712 1655999 - 1656011 + g 86 -6.3 -5.46129 | overlap 1656002 CGTAACTCTTTTAAT TGTTG AAT CAACA TTTTTTGATTTATTC CD1428A 1656393 - 1656527 + | hypothetical protein TERM 1713 1656816 - 1656803 - g 73 -3.9 -5.30189 | opp_overlap 1656803 1656815 TATAATATTAAAAAA TAAGT CAAC ACTTA TAATTTATAGTTTTA CD1429 1656627 - 1657412 + | hypothetical protein CD1430 1658333 - 1657509 - | putative exported polysaccharide deacetylase TERM 1714 1657888 - 1657903 + g 72 -5.4 -4.7078 | AAATCTGTAATACCT GCCATT GATG GATGGC TTTTTGAATGATTAC CD1431 1658554 - 1661673 + | putative exonuclease CD1432 1661676 - 1662290 + | putative ribonuclease CD1433 1664655 - 1662517 - | putative bifunctional protein: peroxiredoxin/chitinase TERM 1715 1663929 - 1663939 + g 70 -4 -4.88711 | GTTCACAGTTACATT CATT TTC AATG TTTTTAGTATGTTCT TERM 1716 1664531 - 1664514 - G 71 -7 -3.96327 | overlap 1664525 ATTCTGTAGTACAAA CTGGTG TAAAAT CACCAG GATGTGAAAATAAAA CD1434 1664870 - 1665160 + | hypothetical protein TERM 1717 1665210 - 1665237 + F 90 -6.5 -5.75945 | opp_overlap 1665210 GATTGATAGGTAAAA TAAAAACACGA TTTAAC TTGTGTTTTTA TTTTTTTTCAAGAAT TERM 1718 1666290 - 1666276 - g 71 -2.2 -5.43621 | ACAAATGATAAAAAA TAATAA ATA CTATTA TGCTGAAGTATATGA CD1435 1665326 - 1666717 + | hypothetical protein TERM 1719 1666859 - 1666848 - g 72 -4.4 -5.10208 | opp_overlap 1666848 1666852 TAATGTGAACAAAAA GCTA GTTA TAGC TATTGGAGCTGTAGC CD1436 1666828 - 1668297 + | hypothetical protein CD1437 1668362 - 1668955 + | putative sigma-54-dependent transcriptional regulator (partial) CD1438 1669137 - 1670495 + | putative multiprotein complex assembly protein CD1439 1670677 - 1671048 + | hypothetical protein CD1440 1671041 - 1671730 + | hypothetical protein TERM 1720 1671797 - 1671787 - f 86 -2.6 -6.37666 | ATAAAATAAAAAAAA TTTA AAA TAAA AACTGAACGAAAAAA CD1441 1672250 - 1673116 + | hypothetical protein CD1442 1673358 - 1674167 + | hypothetical protein TERM 1721 1674167 - 1674191 + F 100 -10.2 -5.33785 | TTCCTTGAGACTGTA GCTTTATCTA ATTAG TAGATAAAGC TTTTTTCTAATACTT CD1443 1674311 - 1675375 + | hypothetical protein CD1444 1675403 - 1676122 + | putative exported polysaccharide deacetylase TERM 1722 1676375 - 1676365 - g 76 -5.4 -5.09426 | opp_overlap 1676365 TTTAAGGGGAAAAAA CCTA TAC TAGG AATTTGTTTAGGTCA TERM 1723 1676446 - 1676431 - g 70 -5.4 -4.53163 | GGAGATATTATAAAA GCACAA CAGC CTGTGC ATGGAAAAGTATATA pabA 1676146 - 1676730 + | para-aminobenzoate synthase glutamine amidotransferase component II pabB 1676723 - 1678081 + | para-aminobenzoate synthase component I pabC 1678071 - 1678814 + | putative aminodeoxychorismate lyase TERM 1724 1678917 - 1678904 - g 74 -5.3 -4.88288 | opp_overlap 1678904 TAAAATAATAGAAAA CCAAA ACAC TTTGG CTGTATATTTAGTGG TERM 1725 1679300 - 1679317 + G 70 -3.5 -5.03747 | AAATAAAGAAAAATT TGATGTT TTTG AATATCA TTTTTTGACGAATTT CD1448 1678848 - 1679549 + | hypothetical protein folE 1679575 - 1680147 + | putative GTP cyclohydrolase I folP 1680199 - 1681002 + | dihydropteroate synthase folB 1681013 - 1681378 + | dihydroneopterin aldolase TERM 1726 1681650 - 1681627 - g 72 -7.6 -3.67967 | gap 1 TACATAGAGAGAGAA TAGTTCATTGG GGA CCAA-GAACTA TAGATGTAGACGTAC folK 1681371 - 1681877 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase TERM 1727 1682449 - 1682438 - g 70 -5.8 -4.21922 | opp_overlap 1682438, overlap 1682433 1682440 TTATTCAAAAGGAAA CAGG TCTT CCTG TTGTGGTAGACCCAA CD1453 1681858 - 1682643 + | chorismate biosynthesis-related protein TERM 1728 1682659 - 1682646 - f 82 -8.1 -4.39133 | opp_overlap 1682646 TAATAATTATTAAAA GAGGC AAGA GCCTC TTTTTTATTCGTAAT TERM 1729 1682646 - 1682659 + F 100 -8.1 -5.52023 | opp_overlap 1682646 TAATAATTATTAAAA GAGGC AAGA GCCTC TTTTTTATTCGTAAT TERM 1730 1682896 - 1682878 - g 72 -2.5 -5.47159 | gap 1, opp_overlap 1682880, overlap 1682881 TGTTAACACAAAAAA TTA-CACC AGAA GGTGATAA TATGAATGATATAAA TERM 1731 1682950 - 1682934 - g 70 -3.7 -5.10665 | ATTGAAGAAATAAAA GCTAGAT GCG ATATAGC AAGTATAATATCTGA dnaG 1682862 - 1684688 + | DNA primase TERM 1732 1684797 - 1684777 - g 81 -3.9 -5.56112 | AGAAAAAGGAAAAAA GCAAGGTTC TCT GACACTTGC AGAGATAATGGAAGC rpoD1 1684700 - 1685872 + | RNA polymerase sigma factor (sigma-43) TERM 1733 1685880 - 1685890 + F 75 -5.4 -4.9218 | opp_overlap 1685878 1685880 TAGACTAAAAAGATA CATC ATT GATG TTTTTGTGATAAATG TERM 1734 1685904 - 1685933 + F 86 -8.8 -4.4648 | gap 1, opp_overlap 1685904 1685905, overlap 1685905 TGTTTTTGTGATAAA T-GCCATGAGATA AGTGA TATCTCATGGCTA TTTTGTAGTAAAGAT TERM 1735 1685932 - 1685904 - f 95 -10.4 -3.85698 | opp_overlap 1685904 1685905, overlap 1685905 TGTTTTTGTGATAAA TGCCATGAGATA AGTGA TATCTCATGGCT ATTTTGTAGTAAAGA TERM 1736 1685905 - 1685931 + F 100 -13.9 -3.84183 | opp_overlap 1685904 1685905, overlap 1685904 GTTTTTGTGATAAAT GCCATGAGATA AGTGA TATCTCATGGC TATTTTGTAGTAAAG TERM 1737 1685931 - 1685905 - f 100 -13.9 -2.91276 | opp_overlap 1685905 1685904, overlap 1685904 GTTTTTGTGATAAAT GCCATGAGATA AGTGA TATCTCATGGC TATTTTGTAGTAAAG CD1456 1686037 - 1686726 + | hypothetical protein CD1457 1686740 - 1687837 + | hypothetical protein wrbA 1687897 - 1688472 + | putative flavoprotein CD1459 1688999 - 1688532 - | putative 5-nitroimidazole reductase CD1460 1689861 - 1689385 - | putative phosphohydrolase CD1461 1691072 - 1689981 - | hypothetical protein TERM 1738 1690164 - 1690191 + g 81 -10 -3.39955 | opp_overlap 1690161, overlap 1690159 TGCTATCCAATACTT CTCATCTTCTTC TGGA GAATAAGATGAG TTGAATTTTAAATTT TERM 1739 1691023 - 1691013 - G 75 -4 -5.18371 | GGGTATAAAATAAAA TGTA GCA TACA TCAAAATTAGAACTG CD1462 1691454 - 1691065 - | GntR family transcriptional regulator TERM 1740 1691554 - 1691529 - H 79 -7.1 -4.68451 | opp_overlap 1691548, overlap 1691531 AAAAATAATAACAAA CACAAAATATA AGTT TATATTTTGTA AAAATTGTAATTTAA TERM 1741 1691552 - 1691531 - H 75 -7.5 -3.90009 | opp_overlap 1691548, overlap 1691529 AAATAATAACAAACA CAAAATATA AGTT TATATTTTG TAAAAATTGTAATTT TERM 1742 1691929 - 1691919 - g 72 -4 -5.02716 | AAAAAAAAAGTAAAA GAAT TTA ATTC AAGAAGAATAAATTG CD1463 1691646 - 1692092 + | hypothetical protein TERM 1743 1692785 - 1692762 - g 79 -5.5 -5.14949 | opp_overlap 1692762 1692764 AAGAAAATAAGAAAA TACTTAAAT TTGGAG ATTTAAGTA TATATACATTAGAAG CD1464 1692377 - 1693081 + | two-component response regulator TERM 1744 1693388 - 1693433 + G 84 -8.8 -4.30231 | opp_overlap 1693387 1693390 ATTAGTTTTAGAGAC TATCAAAATAAATATAATAT TAGTAT GTATAATATTTATTTTGATA TTTGTGTTGATTGTT TERM 1745 1693775 - 1693747 - g 70 -4.1 -4.91873 | overlap 1693741 1693749 CATACGAAGTAAAAA TCGATTTTTTA AATAAGA TAAAAAATCAA TTAAATAGAATGGAT TERM 1746 1694234 - 1694224 - g 74 -6.8 -4.28791 | AATCTATAATAGAAA GCCA AAA TGGC GATATATATGTAAAC CD1465 1693059 - 1694312 + | two-component sensor kinase CD1466 1694392 - 1695069 + | ABC transporter, ATP-binding protein CD1467 1695070 - 1697631 + | ABC transporter, permease protein TERM 1747 1697672 - 1697712 + F 100 -13.7 -5.76237 | opp_overlap 1697672 1697711 AAAATATTATTAAAA TCATTTAAGTGGTATAAAA TAT TATTATATCACTTAAATGA TTTTTTATTTATATA TERM 1748 1697712 - 1697672 - f 100 -11.5 -4.37971 | opp_overlap 1697672, overlap 1697711 AAAATATTATTAAAA TCATTTAAGTGGTATAAAA TAT TATTATATCACTTAAATGA TTTTTTATTTATATA CD1468 1697852 - 1699126 + | putative iron-sulfur protein TERM 1749 1699273 - 1699240 - T 100 -10.5 -5.96894 | opp_overlap 1699240 ACTTAAATAAAAAAA GGCTATATTCAATTA ATAT TACTTGAATACAGCC TTTTTTAGTTATGTT TERM 1750 1699240 - 1699273 + T 100 -8.3 -5.3671 | opp_overlap 1699240 ACTTAAATAAAAAAA GGCTATATTCAATTA ATAT TACTTGAATACAGCC TTTTTTAGTTATGTT CD1469 1702328 - 1699305 - | cell surface protein (putative penicillin-binding protein) TERM 1751 1699651 - 1699662 + g 78 -3 -5.61881 | opp_overlap 1699651 CCACCGATTACATAA GATT TATC AATC TTTTTGTTTTTAAAC TERM 1752 1701549 - 1701570 + g 88 -8.9 -4.47485 | overlap 1701543 TACGTATGCTTTTGC TAGTTTTGA ACTA TCAAAACTA TTTTCTGGAGTTTTT CD1470 1702534 - 1702833 + | putative phage shock protein TERM 1753 1702925 - 1702936 + T 82 -4.4 -5.71712 | opp_overlap 1702925, overlap 1702918 AAATTTAGGAAAGAA CGAA TTTT TTCG TTTTTTTCTATGACA TERM 1754 1702989 - 1703012 + T 100 -14 -4.35518 | opp_overlap 1702989 TTTAAGTTGGAAAAA GGTAGTAGCT TTTT AGCTACTACC TTTTAATATGAACTT TERM 1755 1703012 - 1702989 - T 100 -14 -4.62471 | opp_overlap 1702989 TTTAAGTTGGAAAAA GGTAGTAGCT TTTT AGCTACTACC TTTTAATATGAACTT CD1471 1705290 - 1703071 - | putative membrane protein (putative phage infection protein) TERM 1756 1707062 - 1707045 - g 70 -8.5 -3.09925 | overlap 1707042 AGAGACAAAGAATTA CTATAGC TAGA GCTATAG CCAAAAAACCACAAA TERM 1757 1707340 - 1707324 - g 85 -3.7 -5.66684 | opp_overlap 1707325, overlap 1707325 CAATTTATAAAAAAA TTTTTGC GTT GCAAAAT TTAGTAAGTGAAGAT TERM 1758 1707339 - 1707325 - g 74 -7.2 -3.98383 | opp_overlap 1707325, overlap 1707324 AATTTATAAAAAAAT TTTTGC GTT GCAAAA TTTAGTAAGTGAAGA TERM 1759 1707325 - 1707339 + G 71 -7.2 -3.76224 | opp_overlap 1707324 1707325 AATTTATAAAAAAAT TTTTGC GTT GCAAAA TTTAGTAAGTGAAGA CD1472 1705592 - 1707364 + | ABC transporter, ATP-binding/permease protein TERM 1760 1708487 - 1708500 + G 73 -3.9 -5.24416 | AAGGGAGAAATTGAG CTTAA AGAT TTAAG TTTTTCTTATGATTC CD1473 1707377 - 1709200 + | ABC transporter, ATP-binding/permease protein CD1474 1709318 - 1709863 + | putative ruberythrin TERM 1761 1709890 - 1709926 + F 100 -14.1 -5.4148 | AGTAGATTTTAGGAG TATCTCACTTATAATTT TTA AAGTTATGAGTGAGATA TTTTTTAATTATTTG CD1475 1710123 - 1710731 + | putative hydrolase TERM 1762 1710780 - 1710824 + F 75 -5.3 -5.0538 | overlap 1710785 ATTAATCTGAAAAGT TTTTATGACACTATTGATATT TAA AATATTAGTAGTGTTATTATA TTTTTTGAAATAAAA TERM 1763 1710785 - 1710819 + F 86 -9.6 -4.18465 | overlap 1710780 TCTGAAAAGTTTTTA TGACACTATTGATATT TAA AATATTAGTAGTGTTA TTATATTTTTTGAAA CD1476 1711058 - 1713955 + | putative signaling protein TERM 1764 1713984 - 1714031 + F 70 -3.8 -5.16206 | gap 1, opp_overlap 1713984, overlap 1713984 1713981 TAATGACATATATAA TAAAGGTGCTTTAATATTAGT TGAGTAT ACTATT-TTAGAGCATCTTTA TTTTTGTATTAATTT CD1477 1714276 - 1714488 + | putative ferrous iron transport protein feoA1 1714501 - 1714722 + | putative ferrous iron transport protein A feoB1 1714822 - 1716978 + | ferrous iron transport protein B CD1480 1716998 - 1717156 + | hypothetical protein TERM 1765 1717163 - 1717207 + F 100 -9.7 -5.38047 | gap 1, opp_overlap 1717163 1717166 AAGAGATAAATAGGA TAAGAGCCTGATAA-AAAGT TGAATT GCTTTATTATCAGGTTCTTA TTTTTTGTATAAATA CD1481 1717327 - 1718046 + | hypothetical protein ssuC 1718131 - 1718901 + | putative aliphatic sulfonate ABC transporter,permease protein ssuB 1718894 - 1719625 + | putative aliphatic sulfonates ABC transporter,ATP-binding protein ssuA 1719626 - 1720618 + | putative aliphatic sulfonates ABC transporter,substrate-binding lipoprotein TERM 1766 1720646 - 1720690 + T 83 -5.9 -5.34365 | TATTAAAGTGGAAAA TACACCCTTATTTATTATGGA AAC TGTATGGTAAAAGAGGGTGTA TTTTTATTATTATAC CD1485 1721312 - 1720716 - | hypothetical protein CD1486 1721558 - 1722157 + | putative lipoprotein TERM 1767 1722203 - 1722238 + T 70 -4.1 -5.17054 | gap 1, opp_overlap 1722203 ATTATTTGAGATATA GCGAAGCCTTATAAAT AATAC ATTTTTT-GGCTTCGC TTTTTTGCATGTTAT CD1487 1722794 - 1722327 - | hypothetical protein TERM 1768 1722860 - 1722884 + H 79 -8.7 -3.75629 | opp_overlap 1722862, overlap 1722862 AATATCTTATCATAT AATAGTGACAA TTA TTGTCACTATA TTTAAATTAGGAGTA TERM 1769 1722862 - 1722882 + H 93 -11.3 -3.46068 | opp_overlap 1722862, overlap 1722860 TATCTTATCATATAA TAGTGACAA TTA TTGTCACTA TATTTAAATTAGGAG TERM 1770 1722882 - 1722862 - H 95 -11.3 -3.54951 | opp_overlap 1722860 1722862 TATCTTATCATATAA TAGTGACAA TTA TTGTCACTA TATTTAAATTAGGAG CD1488 1722905 - 1723849 + | putative transcriptional regulator TERM 1771 1724056 - 1724046 - f 70 -2.6 -5.59534 | AACGATAATAAAAAA TAAA AAA TTTA AATAAATTTATTGAC TERM 1772 1724261 - 1724280 + F 100 -10 -5.31091 | opp_overlap 1724252 TAAATAGCTTTCTAA GCCTGAGT TTAT ACTCGGGC TTTTATTTTGTTGTA metN 1724351 - 1725316 + | D-methionine ABC transporter, ATP-binding protein metI 1725309 - 1725965 + | putative D-methionine ABC transporter, permease protein metQ 1726001 - 1726792 + | putative D-methionine ABC transporter,substrate-binding lipoprotein TERM 1773 1726817 - 1726842 + F 100 -5.7 -6.24157 | gap 1, opp_overlap 1726812 1726817 ACAAAATCTACAAAA TGAGTAAA-ATT AAA AATATTTACTCA TTTTTTTTTATAACT TERM 1774 1729068 - 1729050 - g 76 -6.1 -4.62708 | opp_overlap 1729049 1729050, overlap 1729047 AACATATAAAAATAA CTAAACA AAATA TGTTTAG ATTATTGAGATTAAT TERM 1775 1729431 - 1729415 - g 71 -2.4 -5.4433 | opp_overlap 1729415 ATAGACAAAGAAAAA TTAAAT GATAT ATTTAA TCGATTTAAACAAAT CD1492 1726931 - 1729678 + | putative two-component sensor histidine kinase TERM 1776 1729661 - 1729712 + F 93 -11.5 -3.16921 | opp_overlap 1729658 1729670 TTTGAGATAGAATTT TTTGATATATATAAATAATAAAT GTCTAA ATTTATTGTTTATATATATCACA TTAATAAGAGTTAAT CD1493 1729787 - 1730395 + | putative 3-methyladenine DNA glycosylase TERM 1777 1730409 - 1730453 + F 90 -6.8 -5.63504 | AAGTTTTTATATAGG TAAGATATGTATCTATAGGA AGGTA TTTTATAGGTATGTATCTTA TTTTTTTATAGAATT CD1494 1731271 - 1731864 + | putative transcriptional regulator TERM 1778 1732255 - 1732244 - g 86 -3 -5.84432 | GAGAAGATAAAAAAA TAGT TAGA ACTA TGCCAAATACTCCAG proC1 1731904 - 1732707 + | pyrroline-5-carboxylate reductase TERM 1779 1732728 - 1732714 - T 73 -4.4 -5.14163 | opp_overlap 1732721 1732725, overlap 1732725 AGTGAGTAATAAAAA TTTATT GTA AATAAA GAGAATTGCCTTTTA TERM 1780 1732721 - 1732779 + T 86 -9.2 -4.14397 | opp_overlap 1732714 1732725 1732729 1732731, overlap 1732725 1732731 AATAAAAATTTATTG TAAATAAAGAGAATTGCCTTTTATAGAA AAT TTCCATTTTAGGCAATTCTTTTTATTTG TTTAATTTCTAAAAT TERM 1781 1732725 - 1732775 + T 83 -7.8 -4.65182 | opp_overlap 1732714 1732725 1732729 1732731, overlap 1732721 1732731 AAAATTTATTGTAAA TAAAGAGAATTGCCTTTTATAGAA AAT TTCCATTTTAGGCAATTCTTTTTA TTTGTTTAATTTCTA TERM 1782 1732775 - 1732725 - T 72 -7.8 -3.63266 | opp_overlap 1732725 1732721 1732731, overlap 1732714 1732729 1732731 AAAATTTATTGTAAA TAAAGAGAATTGCCTTTTATAGAA AAT TTCCATTTTAGGCAATTCTTTTTA TTTGTTTAATTTCTA TERM 1783 1732731 - 1732769 + T 78 -4.6 -5.5454 | opp_overlap 1732729 1732725 1732731, overlap 1732725 1732721 TATTGTAAATAAAGA GAATTGCCTTTTATAGAA AAT TTCCATTTTAGGCAATTC TTTTTATTTGTTTAA CD1496 1733963 - 1732788 - | hypothetical protein TERM 1784 1733058 - 1733069 + g 74 -3 -5.36441 | opp_overlap 1733058 ATTAGTGTTATTTAA GATT CCCA AATC TTTTTTATCTCCGCC CD1497 1734230 - 1734706 + | hypothetical protein TERM 1785 1734717 - 1734763 + F 100 -14.2 -2.90075 | opp_overlap 1734719 1734731, overlap 1734719 1734731 ATTAAATATTGAGCA TATATATAAAAAAAGACTGTTT AGT AAACAGTCTTTTTTTAGACATA TATCATTCAAAAAAC TERM 1786 1734719 - 1734761 + F 90 -12.4 -3.00298 | opp_overlap 1734719 1734731, overlap 1734717 1734731 TAAATATTGAGCATA TATATAAAAAAAGACTGTTT AGT AAACAGTCTTTTTTTAGACA TATATCATTCAAAAA TERM 1787 1734761 - 1734719 - f 100 -14.6 -2.83701 | opp_overlap 1734719 1734717 1734731, overlap 1734731 TAAATATTGAGCATA TATATAAAAAAAGACTGTTT AGT AAACAGTCTTTTTTTAGACA TATATCATTCAAAAA TERM 1788 1734749 - 1734731 - f 100 -10.4 -5.77988 | opp_overlap 1734731 1734719 1734717, overlap 1734719 ATATATATAAAAAAA GACTGTTT AGT AAACAGTC TTTTTTTAGACATAT TERM 1789 1734731 - 1734749 + F 100 -10.4 -5.42862 | opp_overlap 1734719 1734731, overlap 1734719 1734717 ATATATATAAAAAAA GACTGTTT AGT AAACAGTC TTTTTTTAGACATAT TERM 1790 1734945 - 1734955 + F 70 -2.6 -5.45802 | TAGATTATGTAGGTT TAAA TTA TTTA TTTTTGTTTTAGCAA rpoD2 1734991 - 1735881 + | RNA polymerase sigma factor rpoD TERM 1791 1735966 - 1736000 + F 100 -11.6 -5.20222 | opp_overlap 1735958 1735969, overlap 1735969 ATAAAATCTGTTTAT GAACAGCACACTTGTA TTT TATAGGTGTGCTGTTA TTTTATTTATTTAAT TERM 1792 1735969 - 1735997 + F 100 -13.3 -4.64595 | opp_overlap 1735958 1735969, overlap 1735966 AAATCTGTTTATGAA CAGCACACTTGTA TTT TATAGGTGTGCTG TTATTTTATTTATTT TERM 1793 1735997 - 1735969 - f 75 -8.9 -3.1506 | opp_overlap 1735969 1735966, overlap 1735958 AAATCTGTTTATGAA CAGCACACTTGTA TTT TATAGGTGTGCTG TTATTTTATTTATTT TERM 1794 1736364 - 1736377 + GF 71 -2.3 -5.34309 | opp_overlap 1736364 GATAAAATGAGCAAG GTAGC TAAA GCAAC TTTTTATTTGATGAT TERM 1795 1736801 - 1736760 - gf 78 -5.4 -5.17353 | gap 2, opp_overlap 1736772 ATATTGATTAAAAAA TAGCTACGCACACTCGTGAC TTTA GTCATGAGT-TA-GTAGCTA AAATAGTCAGCATAT TERM 1796 1736772 - 1736791 + GF 73 -8.6 -3.18582 | opp_overlap 1736760 AAATAGCTACGCACA CTCGTGAC TTTA GTCATGAG TTAGTAGCTAAAATA TERM 1797 1736854 - 1736840 - gf 72 -8.6 -3.01912 | opp_overlap 1736831, overlap 1736824 CTATATGTAGAGATA GGATAG AAC CTATCC AATACTACTTGAATT TERM 1798 1737683 - 1737672 - g 74 -3 -5.38951 | AATGCATATAAAAAA TTCT TTAA AGAA AAGGCAGGATTTCCT TERM 1799 1738020 - 1738004 - g 73 -5.9 -4.58076 | AGAATTTATAGAAAA TCCTAAG TAT CTTAAGA AGTCATTAAACAAAC tlpB 1737399 - 1738517 + | transposase-like protein B TERM 1800 1738544 - 1738530 - gf 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG CD1499 1736355 - 1739781 + | putative membrane protein (virulence factor (MviN) homologue) deoC 1739817 - 1740476 + | putative deoxyribose-phosphate aldolase TERM 1801 1740561 - 1740542 - f 100 -12.2 -4.64159 | opp_overlap 1740542 ATAAAGAACAACAAA CAGAGGGA ATTT TCCCTCTG TTTTTTATTTAGTAT TERM 1802 1740542 - 1740561 + F 100 -12.2 -5.69793 | opp_overlap 1740542 ATAAAGAACAACAAA CAGAGGGA ATTT TCCCTCTG TTTTTTATTTAGTAT CD1503 1740658 - 1741026 + | putative transcriptional regulator CD1504 1741030 - 1741905 + | ABC transporter, ATP-binding protein CD1505 1741906 - 1742700 + | putative ABC transporter, permease protein TERM 1803 1742712 - 1742754 + T 100 -11.7 -4.46669 | gap 1, opp_overlap 1742712 ATAACTAAAATAAAA CCTGCTTAAAAAT-CAAATT TGTA AATTTGTATTTTAAAGCAGG TTTATTAGTTTTAAT TERM 1804 1742754 - 1742712 - T 100 -11.7 -5.19998 | gap 1, opp_overlap 1742712 ATAACTAAAATAAAA CCTGCTTAAAAAT-CAAATT TGTA AATTTGTATTTTAAAGCAGG TTTATTAGTTTTAAT TERM 1805 1742782 - 1742804 + T 78 -9.4 -2.99948 | opp_overlap 1742774, overlap 1742781 1742769 1742785 AATAAATGTTGATTT TAAGTATTAA TTT TTAATACTTA TATCTACCTTTATAT CD1506 1744120 - 1742795 - | putative drug/sodium antiporters TERM 1806 1743790 - 1743770 - G 73 -8.5 -3.49321 | overlap 1743768 ACCAAGCAAAATAGA TATTTCTTT GAT AAAGAAATA TGAGATTACTGTGAA TERM 1807 1744178 - 1744160 - H 74 -9 -2.95316 | overlap 1744159 TCTATATATAATAAG CTATATAG TAA CTATATAG TCAAGAAAAATTTTA CD1507 1744509 - 1745093 + | putative thioredoxin CD1507A 1745086 - 1745235 + | hypothetical protein TERM 1808 1745501 - 1745511 + G 74 -3.2 -5.41746 | GTTGGTTTTTTAATG GCAT TTG GTGC TTTTTTTGGCAGATT TERM 1809 1745971 - 1745957 - g 79 -7.2 -4.40605 | ATTGATAAAGATAAA TGTACA AAT TGTACA GCATGTCAAACAAAA CD1508 1745246 - 1746145 + | putative iron-sulfur cluster-binding protein TERM 1810 1746482 - 1746464 - g 85 -8.2 -4.63089 | overlap 1746461 1746466 TATTTTAAAAAAGAA TCCTCCTA AAC TAGGAGAA ATGATGCCAAATCCA TERM 1811 1746480 - 1746466 - g 70 -8.6 -2.60977 | overlap 1746464 1746461 TTTTAAAAAAGAATC CTCCTA AAC TAGGAG AAATGATGCCAAATC TERM 1812 1746682 - 1746644 - g 76 -9.8 -2.6927 | opp_overlap 1746648, overlap 1746641 AGGTGGTATAGATTA TCTAGCTGACTATAATAA AGA TTATTATAAACAGCTTGA TGAAGAACAAAAAAA CD1509 1746150 - 1746719 + | putative lipoprotein TERM 1813 1746828 - 1746774 - T 100 -14.1 -4.40882 | gap 1, opp_overlap 1746781 1746826, overlap 1746776 1746781 CACAAATTAAAAGAA TATAAAAGTGGTAGAATGAAAGTCTT GTAG AAG-CTTTTATTCTACCACTTTTAGA AATAAGTTATTTCAT TERM 1814 1746826 - 1746776 - T 100 -16.7 -3.78172 | gap 1, opp_overlap 1746781, overlap 1746774 1746781 CAAATTAAAAGAATA TAAAAGTGGTAGAATGAAAGTCTT GTAG AAG-CTTTTATTCTACCACTTTTA GAAATAAGTTATTTC TERM 1815 1746781 - 1746821 + T 100 -14.4 -4.1196 | gap 1, opp_overlap 1746776 1746774 1746781 TAAAAGAATATAAAA GTGGTAGAATGAAAGTCTT GTAG AAG-CTTTTATTCTACCAC TTTTAGAAATAAGTT TERM 1816 1746821 - 1746781 - T 100 -12.2 -4.88288 | gap 1, opp_overlap 1746781, overlap 1746776 1746774 TAAAAGAATATAAAA GTGGTAGAATGAAAGTCTT GTAG AAG-CTTTTATTCTACCAC TTTTAGAAATAAGTT CD1510 1747533 - 1746886 - | hypothetical protein TERM 1817 1747890 - 1747843 - R 100 -14.6 -2.6348 | opp_overlap 1747854 1747858, overlap 1747834 1747854 TTTAAATTTTATAAG TTTATAAAAAATAAAGGTACAG TTAA CTGTACCTTTATTTTATCTAAA TATGCAAAGATTATT TERM 1818 1747879 - 1747854 - R 100 -13.5 -5.27923 | opp_overlap 1747854 1747858, overlap 1747843 TAAGTTTATAAAAAA TAAAGGTACAG TTAA CTGTACCTTTA TTTTATCTAAATATG TERM 1819 1747854 - 1747879 + r 100 -13.5 -4.56358 | opp_overlap 1747854 1747843, overlap 1747858 TAAGTTTATAAAAAA TAAAGGTACAG TTAA CTGTACCTTTA TTTTATCTAAATATG TERM 1820 1747858 - 1747875 + r 100 -9.9 -4.83243 | opp_overlap 1747854 1747843, overlap 1747854 TTTATAAAAAATAAA GGTACAG TTAA CTGTACC TTTATTTTATCTAAA CD1511 1748837 - 1747923 - | hypothetical protein TERM 1821 1749130 - 1749115 - R 70 -4.8 -4.83243 | opp_overlap 1749118 TTGATACAAAACAAA TGTTTT TTGT AAAACA AGAACTTTTATAGCA TERM 1822 1749485 - 1749461 - R 75 -6.7 -4.49314 | CATTATTAAAAAGAA TTATTTTATTT ATA AAATAAAACAA GTAATAAGAATAAAT TERM 1823 1749604 - 1749661 + r 100 -18.3 -4.26881 | opp_overlap 1749608 1749614, overlap 1749608 1749614 AAGCTATGAAATTGA TATATTAAAATGGGTAAGAAGAATATT ATAT AGGATTCTTCTTACCCATTTTAATAAA TTTAATTTTATGCCA TERM 1824 1749657 - 1749608 - R 100 -17 -2.98802 | opp_overlap 1749604 1749608 1749614, overlap 1749614 TATGAAATTGATATA TTAAAATGGGTAAGAAGAAT ATTATATAGG ATTCTTCTTACCCATTTTAA TAAATTTAATTTTAT TERM 1825 1749608 - 1749657 + r 100 -19.1 -2.76466 | opp_overlap 1749608 1749614, overlap 1749604 1749614 TATGAAATTGATATA TTAAAATGGGTAAGAAGAATATT ATAT AGGATTCTTCTTACCCATTTTAA TAAATTTAATTTTAT TERM 1826 1749614 - 1749651 + r 100 -13.7 -4.33165 | opp_overlap 1749608 1749614, overlap 1749608 1749604 ATTGATATATTAAAA TGGGTAAGAAGAATATT ATAT AGGATTCTTCTTACCCA TTTTAATAAATTTAA TERM 1827 1749651 - 1749614 - R 100 -11.6 -4.39568 | opp_overlap 1749614 1749608 1749604, overlap 1749608 ATTGATATATTAAAA TGGGTAAGAAGAAT ATTATATAGG ATTCTTCTTACCCA TTTTAATAAATTTAA TERM 1828 1749994 - 1750031 + r 90 -10.1 -3.74178 | opp_overlap 1749994, overlap 1749987 ATTATAATCGCAAAA CTGGATAAACTTTCATT CTTA AAAGAAAATTTATCCAG TTTAAAGTTTAATTA TERM 1829 1750031 - 1749994 - R 100 -12.3 -4.22338 | opp_overlap 1749994 1749987 ATTATAATCGCAAAA CTGGATAAACTTTCATT CTTA AAAGAAAATTTATCCAG TTTAAAGTTTAATTA panC 1751129 - 1750281 - | putative pantoate--beta-alanine ligase panB 1751975 - 1751148 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1830 1751587 - 1751599 + gr 74 -6.3 -4.42594 | ATTACAGGTATTTGA GCATT TAC AATGC TTTCTATTTGCTTTA CD1514 1752846 - 1751950 - | hypothetical protein TERM 1831 1752429 - 1752418 - G 75 -4.4 -5.24531 | opp_overlap 1752419 ATCTCTTATAAAAAA TTGG TTTC CCAA ATCATCTATGAAATT TERM 1832 1752623 - 1752610 - G 73 -8.1 -3.40112 | ACTAGATTTTAAAGA GCCAC TTGT GTGGC AAATGTATTTATGTT TERM 1833 1753097 - 1753111 + H 76 -2.2 -5.83211 | overlap 1753095 1753098 AAAAAAATTATGATA TTTATA AAA TATAAG TTTTTTGTTTTACTA TERM 1834 1755099 - 1755114 + G 74 -3.2 -5.44119 | opp_overlap 1755099 GTACTTTTAGGAAAT GGATTG ATTA CTATCC TTTTTTTAAAGTGAG CD1515 1753526 - 1755619 + | putative signaling protein TERM 1835 1755810 - 1755789 - f 72 -7.5 -3.57441 | opp_overlap 1755799 1755802 1755805, overlap 1755797 1755802 AAGGGATAACCATAA TAAAAATAG ATAT CTATTTTTA GATTAAAAATAATAT CD1516 1757492 - 1758310 + | MerR family transcriptional activator TERM 1836 1758317 - 1758375 + T 93 -10.1 -3.97388 | gap 1, opp_overlap 1758320, overlap 1758320 1758322 1758324 1758371 TCCAGATAAGAATTA AAATAGAGATATATTCAAATGTTAAGTA ATTT TACTTATCATT-GAATATATCTCTATGC TTTATAATAAAGTAT TERM 1837 1758372 - 1758320 - T 100 -16.2 -4.60317 | gap 1, opp_overlap 1758317 1758320 1758322 1758324 1758371 AGATAAGAATTAAAA TAGAGATATATTCAAATGTTAAGTA ATTT TACTTATCATT-GAATATATCTCTA TGCTTTATAATAAAG TERM 1838 1758320 - 1758372 + T 100 -16.2 -3.04122 | gap 1, opp_overlap 1758320, overlap 1758317 1758322 1758324 1758371 AGATAAGAATTAAAA TAGAGATATATTCAAATGTTAAGTA ATTT TACTTATCATT-GAATATATCTCTA TGCTTTATAATAAAG TERM 1839 1758322 - 1758370 + T 100 -14.4 -3.07455 | gap 1, opp_overlap 1758320, overlap 1758320 1758317 1758324 ATAAGAATTAAAATA GAGATATATTCAAATGTTAAGTA ATTT TACTTATCATT-GAATATATCTC TATGCTTTATAATAA TERM 1840 1758324 - 1758368 + T 87 -11.2 -3.08869 | gap 1, opp_overlap 1758320, overlap 1758322 1758320 1758317 AAGAATTAAAATAGA GATATATTCAAATGTTAAGTA ATTT TACTTATCATT-GAATATATC TCTATGCTTTATAAT feoB2 1760563 - 1758443 - | putative ferrous ion transport protein feoA2 1760816 - 1760589 - | putative ferrous ion transport protein TERM 1841 1760928 - 1760910 - R 100 -11.8 -5.93809 | opp_overlap 1760914 CTTTTACAAAAAAAA GATAGGCA AGA TGCCTATC ATACAAAGTTGGGTA TERM 1842 1761030 - 1761053 + r 78 -9.6 -3.00766 | opp_overlap 1761030 TTTGATAATAAAAAA GTCAGAAAGC AAAA GCCTTCTGAC TCTATGTAAGGTATT TERM 1843 1761053 - 1761030 - R 100 -11.8 -5.55769 | opp_overlap 1761030 TTTGATAATAAAAAA GTCAGAAAGC AAAA GCCTTCTGAC TCTATGTAAGGTATT CD1519 1761583 - 1761143 - | putative acetyltransferase CD1520 1761756 - 1762724 + | hypothetical protein TERM 1844 1762826 - 1762814 - f 70 -3.5 -5.32599 | GACAAAATATAAAAA TAATA ATA TATTA TGAGTAAGTTAAGAA TERM 1845 1763114 - 1763141 + F 100 -11.4 -5.88565 | opp_overlap 1763104 1763114 1763113, overlap 1763104 TAACACGTAAGCAAT GCTTTCGTCCTT TTAA GAGGATGAAAGC TTTTTTTATTATAAA TERM 1846 1763339 - 1763324 - g 82 -7.6 -4.371 | CCTATGATAGTAAAA TTGGGT CTAG ACCCAA GTGCTCCAGATATAC tyrR 1763201 - 1764409 + | tyrosyl-tRNA synthetase TERM 1847 1764467 - 1764417 - T 82 -10.1 -2.99269 | opp_overlap 1764422, overlap 1764422 TAAAATAGAGTAAAG TAAAAGCAAGTCTATTGAGTATA AAATG TACATTCAATAAACTTGCTTTTT TATTATATTAAAATT TERM 1848 1764462 - 1764422 - T 100 -10 -4.6038 | opp_overlap 1764422, overlap 1764417 TAGAGTAAAGTAAAA GCAAGTCTATTGAGTATA AAATG TACATTCAATAAACTTGC TTTTTTATTATATTA TERM 1849 1764422 - 1764462 + T 100 -7.8 -5.64304 | opp_overlap 1764422 1764417 TAGAGTAAAGTAAAA GCAAGTCTATTGAGTATA AAATG TACATTCAATAAACTTGC TTTTTTATTATATTA CD1522 1765351 - 1764470 - | putative polysaccharide deacetylase CD1523 1765767 - 1766681 + | hypothetical protein TERM 1850 1767340 - 1767324 - g 72 -5.2 -4.68645 | GATGGAAAATTAAAA TTAGCT AAGAG AGCTAA AGAATTAGGATTAGA CD1524 1766904 - 1767449 + | putative rubrerythrin TERM 1851 1767504 - 1767475 - f 82 -10.9 -2.57259 | opp_overlap 1767480, overlap 1767480 AATTAAAACATAGAT TAAAAGGAGAAAC TTTG GTTTCTCCTTTTT TAAATTATACAAATA TERM 1852 1767480 - 1767499 + F 100 -10.8 -5.1925 | opp_overlap 1767475 1767480 AAACATAGATTAAAA GGAGAAAC TTTG GTTTCTCC TTTTTTAAATTATAC TERM 1853 1767499 - 1767480 - f 100 -10.8 -4.43864 | opp_overlap 1767480, overlap 1767475 AAACATAGATTAAAA GGAGAAAC TTTG GTTTCTCC TTTTTTAAATTATAC TERM 1854 1767715 - 1767704 - g 83 -2.2 -5.86965 | ATTGATGAAAAAAAA GCCT GAAG AAGC TACAACTACACATCC CD1525 1767549 - 1768697 + | putative iron-sulfur protein TERM 1855 1769115 - 1769091 - g 75 -4.3 -5.28315 | AGAAAAGTCAAAAAA TGCATGTATAA ATG TTTTACAAGCA GCAGCTATAACTAAA pyrC 1768750 - 1770015 + | dihydroorotase TERM 1856 1770185 - 1770239 + T 95 -11.2 -3.77303 | gap 1, opp_overlap 1770185 CTTTTTATGAAAGAA CGCACTATTATATTTGGAAAGATTA AGTTCC TAATCTATC-ATATATAATAGTGCG TTATATATTTAAGTA TERM 1857 1770239 - 1770185 - T 100 -11.9 -4.00042 | gap 1, opp_overlap 1770185 CTTTTTATGAAAGAA CGCACTATTATATTTGGAAAGATTAA GTTC CTAATCTATC-ATATATAATAGTGCG TTATATATTTAAGTA CD1527 1771533 - 1770301 - | ABC transporter, permease protein TERM 1858 1771324 - 1771308 - G 71 -2.3 -5.40474 | ATGGTTTTAAAAAAA TACTCAT ATC ATCAGTA AGACCTGTGTTATCG CD1528 1772210 - 1771536 - | ABC transporter, ATP-binding protein CD1529 1773447 - 1772218 - | putative ABC transporter, permease protein TERM 1859 1772702 - 1772717 + g 71 -7.6 -3.4243 | opp_overlap 1772697 1772702, overlap 1772700 GAAAAAACTAGTATA TTGACC ATTT GGTCAA TCTTCATTTTAGGTA TERM 1860 1772955 - 1772969 + g 86 -2.9 -6.07374 | opp_overlap 1772955, overlap 1772958 CTTTATTTTCAGCAA TATCA GAAAG TGATA TTTTTTGTTTTTTGT TERM 1861 1772958 - 1772976 + g 74 -3.2 -5.48063 | opp_overlap 1772955, overlap 1772955 TATTTTCAGCAATAT CAGAAAGT GAT ATTTTTTG TTTTTTGTATTGACT CD1530 1774563 - 1773559 - | two-component sensor histidine kinase CD1531 1775261 - 1774587 - | two-component response regulator CD1532 1775549 - 1776316 + | ABC transporter, ATP-binding protein TERM 1862 1776957 - 1776979 + G 75 -5.6 -4.73864 | ATTAGTTATTTTATT GCTGAAAATA TTA TGCTTTCAGC TTTTATATTAGTTAC CD1533 1776303 - 1778240 + | putative ABC transporter, permease protein TERM 1863 1779030 - 1779044 + G 76 -10 -2.63566 | opp_overlap 1779029 1779030, overlap 1779029 1779025 CTAAAGATGGTAAAG CTCCAG AGG CTGGAG ATATATTTATATGTG TERM 1864 1779044 - 1779030 - g 76 -10 -2.81218 | opp_overlap 1779030 1779029 1779025, overlap 1779029 CTAAAGATGGTAAAG CTCCAG AGG CTGGAG ATATATTTATATGTG CD1534 1778465 - 1780078 + | putative gamma-glutamyltranspeptidase TERM 1865 1780166 - 1780131 - T 95 -10.5 -4.1421 | opp_overlap 1780136, overlap 1780136 TATATGAAATAATAA GTAAAGGCGAAAGTC TACAAT GACTGACGCCTTTAC AAAACTTAAGCTATC sseA 1781062 - 1780211 - | putative 3-mercaptopyruvate sulfurtransferase CD1536 1781688 - 1782581 + | ferredoxin--NADP(+) reductase subunit alpha TERM 1866 1783238 - 1783206 - g 100 -9.4 -4.55887 | GTGTAAAAATAGAAA CTAATGTAATTGTT GGTAA AACAATTACAGTAG ATGAACTTATAGAAG aspB 1782581 - 1783975 + | putative oxidoreductase TERM 1867 1784294 - 1784276 - f 71 -5.4 -4.63218 | GTGTGGCTAATAAAA TCAGATTT GTC AAATCTAA CATTAAATAATAGAA TERM 1868 1785746 - 1785733 - g 73 -3.9 -5.1971 | opp_overlap 1785733, overlap 1785735 AGTAAAAAGGAAAAA TATGA ACAT TCATA TTCATTTTTTAATGA CD1538 1784341 - 1786560 + | putative signaling protein TERM 1869 1786634 - 1786585 - f 100 -16.1 -3.48668 | opp_overlap 1786587, overlap 1786571 1786587 1786598 ATTATTAGACTATAA GATACCCTAACAACTTACTTACA AATA TGTAAGTTAATTGTTAGGGTATT TTTATGGTTAAAGTA TERM 1870 1786587 - 1786632 + F 100 -16.5 -4.98255 | opp_overlap 1786571 1786585 1786587 1786598 TATTAGACTATAAGA TACCCTAACAACTTACTTACA AATA TGTAAGTTAATTGTTAGGGTA TTTTTATGGTTAAAG TERM 1871 1786632 - 1786587 - f 100 -18.7 -3.31365 | opp_overlap 1786587, overlap 1786571 1786585 1786598 TATTAGACTATAAGA TACCCTAACAACTTACTTACA AATA TGTAAGTTAATTGTTAGGGTA TTTTTATGGTTAAAG CD1539 1786707 - 1787453 + | ABC transporter, ATP-binding protein TERM 1872 1787832 - 1787845 + G 73 -3.9 -5.33331 | TATTACTTGGTTTAT CAATT TCAA AATTG TTTTTATTGTATTTA TERM 1873 1788689 - 1788679 - g 72 -2.6 -5.43514 | overlap 1788687 AAAACAATTAAAAAA TTAT AGT ATAA AAAATTTAAATATAG TERM 1874 1789094 - 1789082 - g 72 -2.7 -5.42265 | GTAAAGTACAAAAAA CTATC AAA AATAG GTCTATCTTTTAAAA CD1540 1787453 - 1789333 + | ABC transporter, permease protein TERM 1875 1789386 - 1789406 + F 79 -9 -3.49777 | gap 1, opp_overlap 1789385 AGTAGTTAATATTAG GGGAGG-GC ATTT GCACCTCCC TTGTAATATGTGGAA TERM 1876 1790266 - 1790286 + G 74 -9.1 -2.88802 | overlap 1790265 1790268 CTCATGGTGGAGATT TAGCTATAG GGG CTATGGCTA CTATTTCTTCTATTG CD1541 1789452 - 1790843 + | putative drug/sodium antiporter CD1542 1790950 - 1791990 + | hypothetical protein TERM 1877 1792041 - 1792007 - f 100 -14.6 -2.70215 | opp_overlap 1792012, overlap 1791997 1792012 AAATGTTTAGATAAC TAAAATGGTATAGTGT TTT ACACTATACCATTTTT AATGTCATTAGCATG TERM 1878 1792012 - 1792036 + F 100 -14.5 -4.84274 | opp_overlap 1792012 1792007 TTTAGATAACTAAAA TGGTATAGTGT TTT ACACTATACCA TTTTTAATGTCATTA TERM 1879 1792036 - 1792012 - f 100 -14.5 -4.53034 | opp_overlap 1792012, overlap 1792007 TTTAGATAACTAAAA TGGTATAGTGT TTT ACACTATACCA TTTTTAATGTCATTA TERM 1880 1792219 - 1792258 + F 78 -5.8 -5.26316 | opp_overlap 1792246 AAAAATATAATAAAA GTGTGAGGCTTAGTAATT AACA AATTATGTGGCTTCACAC TTTTTTATAAAATAA TERM 1881 1792537 - 1792518 - g 79 -7.2 -4.37198 | overlap 1792511 AATGTAAATTCAAAA CCTGAAGA CTTA TCTTCAAG TAAAACTGTAGCAAG TERM 1882 1792741 - 1792723 - g 71 -9 -2.78655 | opp_overlap 1792727, overlap 1792720 1792719 1792727 ATAGAAAAGAACTTA CAAAGATT AGA AATCTTTG TGACCAATTTGTGAG CD1543 1792479 - 1793132 + | putative acyl carrier protein phosphodiesterase CD1543A 1793208 - 1793417 + | hypothetical protein CD1545 1794123 - 1793557 - | hypothetical protein CD1546 1794284 - 1794937 + | putative hemolysin-like membrane protein TERM 1883 1795714 - 1795740 + F 100 -9.5 -5.77677 | opp_overlap 1795714 1795712 TAAGAGAAAATTATA GCCATATAGGT ATAAA GCCTATGTGGC TTTTTTATTGTTTTA TERM 1884 1796061 - 1796075 + G 76 -3.6 -5.38249 | CAAGATGGGAAGATG GTTTAA AGC TTAAGC TTTTTTATAATTCAT hisZ 1795799 - 1796743 + | putative ATP phosphoribosyltransferase regulatory subunit hisG 1796765 - 1797391 + | putative ATP phosphoribosyltransferase hisC 1797425 - 1798474 + | putative histidinol-phosphate aminotransferase hisB 1798477 - 1799055 + | imidazoleglycerol-phosphate dehydratase hisH 1799057 - 1799662 + | putative imidazole glycerol phosphate synthase subunit hisA 1799659 - 1800381 + | putative 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylidene amino] imidazole-4-carboxamide isomerase hisF 1800363 - 1801121 + | putative imidazole glycerol phosphate synthase subunit hisI 1801149 - 1801817 + | histidine biosynthesis bifunctional protein TERM 1885 1801840 - 1801882 + F 100 -11.1 -4.93333 | gap 1, opp_overlap 1801843 1801848, overlap 1801848 TAGATTAATGGGTAA TAAGAAAATATACCGCTTTT AATA AAAAGTGGTATATTTT-TTA TTTTATATTTTAATT TERM 1886 1801880 - 1801843 - f 79 -8.7 -3.65581 | opp_overlap 1801840 1801848, overlap 1801848 ATTAATGGGTAATAA GAAAATATACCGCTTTT AATA AAAAGTGGTATATTTTT TATTTTATATTTTAA TERM 1887 1801848 - 1801875 + F 100 -10.8 -5.8901 | opp_overlap 1801843 1801848, overlap 1801840 TGGGTAATAAGAAAA TATACCGCTTTT AATA AAAAGTGGTATA TTTTTTATTTTATAT TERM 1888 1801875 - 1801848 - f 88 -8.6 -4.89477 | opp_overlap 1801848 1801840, overlap 1801843 TGGGTAATAAGAAAA TATACCGCTTTT AATA AAAAGTGGTATA TTTTTTATTTTATAT TERM 1889 1802113 - 1802162 + F 93 -9.8 -4.15328 | opp_overlap 1802118 1802119, overlap 1802119 ATCTAAAAGGAGTTT TCAAACCTAATATTTCATTTTT AAATAA AAAAATAAAATATTAGTTTTGA TTTCTGGTTTAAATT TERM 1890 1802156 - 1802119 - f 75 -9.6 -2.73619 | opp_overlap 1802113 1802119, overlap 1802118 AAGGAGTTTTCAAAC CTAATATTTCATTTTT AAATAA AAAAATAAAATATTAG TTTTGATTTCTGGTT TERM 1891 1802119 - 1802156 + F 79 -7.4 -4.64383 | opp_overlap 1802119 1802118, overlap 1802113 AAGGAGTTTTCAAAC CTAATATTTCATTTTT AAATAA AAAAATAAAATATTAG TTTTGATTTCTGGTT TERM 1892 1802748 - 1802734 - g 80 -10 -3.32498 | opp_overlap 1802733 1802731 1802734 1802745 CAGTCTATACATTAA CTGGAG GAG CTCCAG GTCTTGGTATATTGG TERM 1893 1802734 - 1802748 + G 75 -10 -2.54803 | opp_overlap 1802734, overlap 1802733 1802731 1802745 CAGTCTATACATTAA CTGGAG GAG CTCCAG GTCTTGGTATATTGG CD1555 1802604 - 1803947 + | putative amino acid permease TERM 1894 1803996 - 1803986 - f 78 -5.4 -5.19998 | opp_overlap 1803986 ATAATTAAAATAAAA GAGA CTG TCTC AAATAGAGATAAGTC TERM 1895 1803986 - 1804013 + F 86 -5.7 -5.64873 | gap 1, opp_overlap 1803986 1804002 ATAATTAAAATAAAA GAGAC-TGTCTC AAATA GAGATAAGTCTC TTTTTTATTGTTAAA TERM 1896 1804150 - 1804176 + F 78 -5.4 -5.252 | opp_overlap 1804148 1804160 1804162, overlap 1804148 1804152 1804153 ATCTAAAAAATTATT TATTTTAAAATA CTT TATTTTAAAGTG TTTTTTATCAAACTA CD1556 1804700 - 1805533 + | putative polysaccharide deacetylase TERM 1897 1805738 - 1805725 - g 81 -3.8 -5.61277 | TACAAAAAAACAAAA GCAG TTTTAT CTGC TACTAATAATTATAT TERM 1898 1806404 - 1806385 - g 76 -8 -3.98991 | opp_overlap 1806385 TTAAAGAAAAATGAA GTTTCAAA TGTG TTTGAAAC TAGTTATGGATATCA CD1557 1805602 - 1806558 + | putative peptidyl-prolyl isomerase sigV 1806610 - 1807092 + | RNA polymerase sigma factor CD1559 1807104 - 1807973 + | hypothetical protein TERM 1899 1808646 - 1808679 + G 77 -9.9 -2.95404 | opp_overlap 1808651, overlap 1808643 1808649 TCTATAAATAAGTAT CAAGATTTTTATTTT AATA AAAATGGAAATCTTG TGATTAGTTTTGATG CD1560 1808016 - 1808771 + | hypothetical protein CD1561 1808813 - 1809634 + | putative dehydrogenase accessory protein CD1562 1809639 - 1810400 + | hypothetical protein TERM 1900 1810805 - 1810850 + F 100 -13.7 -6.09196 | opp_overlap 1810805, overlap 1810826 TACCGCGGAATATAA CTTTCGTCCTTATAAGTAATA TTTA TATTGCTTATAAAGATGAAAG TTTTTTTATTTTAAG TERM 1901 1810850 - 1810805 - f 95 -11.5 -3.66288 | opp_overlap 1810805 1810826 TACCGCGGAATATAA CTTTCGTCCTTATAAGTAATA TTTA TATTGCTTATAAAGATGAAAG TTTTTTTATTTTAAG CD1564 1810931 - 1811170 + | hypothetical protein ilvC 1811480 - 1812469 + | ketol-acid reductoisomerase ilvB 1812516 - 1814210 + | putative acetolactate synthase large subunit TERM 1902 1814219 - 1814263 + F 87 -6.8 -5.38549 | TAACTAAAACTTATA CTGAATATTGATAAAATTTT TTATT AAATTTTTATTGGTATTCAG TTTTTGTTGTTTAGA CD1567 1814421 - 1815098 + | putative manganese-containing catalase TERM 1903 1815224 - 1815194 - f 79 -7 -4.71061 | opp_overlap 1815194 1815196, overlap 1815196 ATGTATAGTTAAAAA TGGGTATACACTTA TTA TAAGTGTATATCTA TTTGTTTATTGCAAA TERM 1904 1815194 - 1815224 + F 100 -11.4 -4.67607 | opp_overlap 1815194 1815196, overlap 1815196 ATGTATAGTTAAAAA TGGGTATACACTTA TTA TAAGTGTATATCTA TTTGTTTATTGCAAA TERM 1905 1815222 - 1815196 - f 75 -9.6 -2.64666 | opp_overlap 1815196 1815194, overlap 1815194 GTATAGTTAAAAATG GGTATACACTTA TTA TAAGTGTATATC TATTTGTTTATTGCA TERM 1906 1815196 - 1815222 + F 100 -11.8 -3.94772 | opp_overlap 1815194 1815196, overlap 1815194 GTATAGTTAAAAATG GGTATACACTTA TTA TAAGTGTATATC TATTTGTTTATTGCA TERM 1907 1816487 - 1816470 - g 79 -7.1 -4.49673 | overlap 1816484 ATAGAAAAGAAAGAA CATCTTT GCAT AAAGATG ACAAGATACTTACAT CD1568 1815272 - 1817308 + | hypothetical protein TERM 1908 1817399 - 1817384 - T 70 -3.2 -5.41787 | overlap 1817386 CAAAAAACAGAAAAA GAGTTC CTAA GAACAC CTAATCTATGTAATG CD1569 1818065 - 1817499 - | MarR family transcriptional regulator TERM 1909 1818899 - 1818918 + GH 73 -8.6 -3.18582 | overlap 1818894 AAATAGTTACTCACA CTCGTGAC TTTA GTCATGAG TTAGTAGCTAAAATA tlpA 1819510 - 1819602 + | transposase-like protein A TERM 1910 1819893 - 1819882 - g 74 -3 -5.38951 | AATGCATATAAAAAA TTCT TTAA AGAA AAATCAGGATTTCCT TERM 1911 1819910 - 1819897 - g 71 -3.1 -5.27335 | TTCTTTAAAGAAAAA TCAGG ATTT CCTAA ATTTAAATCAAAGAA TERM 1912 1820230 - 1820214 - g 73 -5.9 -4.54449 | AGACTTTATAGAAAA TCCTAAG TAT CTTAAGA AGTCATTAAGCAAAC tlpB 1819642 - 1820727 + | transposase-like protein B TERM 1913 1820754 - 1820740 - gf 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG CD1570 1818353 - 1821253 + | putative lysophospholipase TERM 1914 1821541 - 1821577 + F 93 -9.1 -4.78848 | GCTATTTAATGTGAA TCTATTAATTAGGTT ATACTTA AACTTAATTAATAGA TTTTATATTTCAAGA CD1573 1821726 - 1822940 + | putative transcriptional regulator TERM 1915 1823165 - 1823126 - T 83 -8 -4.62471 | opp_overlap 1823128, overlap 1823128 TTTAAGCGTGAAAAA GAGGATGTATCATGAATT TTTT AGTTCATGATGCATCCTT CTTTGTATGAAATCC TERM 1916 1823128 - 1823163 + T 100 -15 -4.15029 | opp_overlap 1823126 1823128 TAAGCGTGAAAAAGA GGATGTATCATGAATT TTTT AGTTCATGATGCATCC TTCTTTGTATGAAAT TERM 1917 1823163 - 1823128 - T 95 -10.6 -3.92577 | opp_overlap 1823128, overlap 1823126 TAAGCGTGAAAAAGA GGATGTATCATGAATT TTTT AGTTCATGATGCATCC TTCTTTGTATGAAAT CD1574 1823810 - 1823289 - | hypothetical protein TERM 1918 1823601 - 1823585 - G 73 -5.9 -4.57569 | opp_overlap 1823571 GCATTTCTGGAAAAA TGCAGAA ATG TTCTACA TAGATAAAGTCATCT TERM 1919 1823698 - 1823714 + g 93 -8.1 -5.12172 | opp_overlap 1823697, overlap 1823706 TTATTTTTCAAAATT TCTTCTT GCA AAGAAGA TTTTCTTTGTTCATG TERM 1920 1824725 - 1824715 - g 71 -6.8 -3.97308 | overlap 1824700 GGCAAACATATGAAA GTGG TTG CCAC TGCATATGCAGGAGA CD1575 1824166 - 1824963 + | hypothetical protein TERM 1921 1825384 - 1825360 - g 76 -5.1 -5.1287 | overlap 1825362 1825363 GTCATATTCAAAAAA TATTATACCTA TAA TAGGTATACCA TTAAAACCAGATATT TERM 1922 1825381 - 1825363 - g 73 -9 -3.10444 | overlap 1825362 1825360 ATATTCAAAAAATAT TATACCTA TAA TAGGTATA CCATTAAAACCAGAT CD1576 1825073 - 1825663 + | putative arylesterase TERM 1923 1826909 - 1826893 - g 71 -2.4 -5.42198 | GGTGAAAAAATAAAA TTATTT GAACA AAATAA AAATAGAAGTTATGT pgm1 1825729 - 1827426 + | putative phosphoglucomutase TERM 1924 1828070 - 1828080 + G 70 -4 -4.98531 | TGGTCCTTATTTTTT TATC TAT GATA TTTTTAGTTTACGGG CD1578 1827640 - 1828479 + | putative membrane-associated ribonuclease TERM 1925 1828560 - 1828578 + F 100 -6 -6.20267 | opp_overlap 1828562 CATTTAAGTTAAAAA GTCTAGAA TTT TTCTGGGC TTTTTTTATTTTTAG TERM 1926 1829558 - 1829572 + G 75 -5.8 -4.70659 | opp_overlap 1829558 TATCTAGTAAAAAAA GATTTT TAC AAAATC TTTTTGAATATGAAG TERM 1927 1829572 - 1829558 - g 88 -5.8 -5.53991 | opp_overlap 1829558 TATCTAGTAAAAAAA GATTTT TAC AAAATC TTTTTGAATATGAAG CD1579 1828996 - 1830852 + | putative two-component histidine kinase TERM 1928 1831192 - 1831160 - f 91 -10.7 -3.62522 | opp_overlap 1831151 1831162, overlap 1831162 GAACCGCGGGAATAA TACTCTCGTCCTTAT GTT ATAAGGATGAGAGTT TTTTGTTATTTAAAA TERM 1929 1831162 - 1831190 + F 100 -15.5 -5.72254 | opp_overlap 1831160 1831162, overlap 1831151 ACCGCGGGAATAATA CTCTCGTCCTTAT GTT ATAAGGATGAGAG TTTTTTGTTATTTAA TERM 1930 1831190 - 1831162 - f 100 -13.3 -3.38991 | opp_overlap 1831151 1831162, overlap 1831160 ACCGCGGGAATAATA CTCTCGTCCTTAT GTT ATAAGGATGAGAG TTTTTTGTTATTTAA TERM 1931 1831461 - 1831492 + F 100 -11.7 -5.08601 | overlap 1831455 1831463 GTGGAACCGCGAGTA TGGACTCGTCCCT TTATAT AGGGATGAGTCTA TTTTTATTGCAATAA TERM 1932 1831463 - 1831490 + F 100 -12.1 -4.16909 | overlap 1831455 1831461 GGAACCGCGAGTATG GACTCGTCCCT TTATAT AGGGATGAGTC TATTTTTATTGCAAT hom2 1831561 - 1832778 + | homoserine dehydrogenase TERM 1933 1833245 - 1833263 + G 79 -8.2 -4.0031 | opp_overlap 1833243 1833238 1833245 TAAAGGAATCGAATA TTTAGCAG AAG CTGCTAGA TTATTTGATGAAGGT CD1581 1832895 - 1833377 + | hypothetical protein TERM 1934 1833560 - 1833527 - f 100 -13.9 -3.8572 | opp_overlap 1833527 TACAATATGATTAAA CTCCCATCCTCTAGC TTTT GATAGAGGGTGGGAG TTTTTATTTATTGAT TERM 1935 1833527 - 1833560 + F 100 -16.1 -5.48514 | opp_overlap 1833527 TACAATATGATTAAA CTCCCATCCTCTAGC TTTT GATAGAGGGTGGGAG TTTTTATTTATTGAT hisD 1833688 - 1834953 + | histidinol dehydrogenase CD1583 1835908 - 1835156 - | hypothetical protein TERM 1936 1836024 - 1835988 - R 93 -11.8 -3.28712 | opp_overlap 1835988 1835994, overlap 1835994 TGTTCTTTCTTAGAA TAAAAATGTGCCACGC ATAAA ACGTGACACATTTCTA ATTATAAATTTTGCT TERM 1937 1836018 - 1835994 - R 95 -8.6 -5.18726 | opp_overlap 1835988 1835994, overlap 1835988 TTCTTAGAATAAAAA TGTGCCACGC ATAAA ACGTGACACA TTTCTAATTATAAAT CD1583A 1836295 - 1836026 - | hypothetical protein TERM 1938 1836554 - 1836575 + H 70 -7.5 -3.39365 | overlap 1836552 TGTATGAGGATATTT TATTATAGT CAAT ACTATAATA TGTATTTATATCATC CD1584 1836761 - 1837864 + | putative sugar metabolism repressor CD1585 1837866 - 1838816 + | putative N-acetylglucosamine kinase TERM 1939 1839857 - 1839843 - g 86 -5 -5.5454 | opp_overlap 1839843 TGAAATAAATAAAAA GGAAAT TAT ATCTCC TGTTACACCTAAGTA CD1586 1838809 - 1839993 + | hypothetical protein CD1587 1840006 - 1841502 + | putative ribose ABC transporter, ATP-binding protein CD1588 1841525 - 1842475 + | putative ribose ABC transporter, permease protein TERM 1940 1842471 - 1842461 - f 82 -5.4 -5.5353 | TATAGCAAGAAAAAA CTTG CTT CAAG ATAAAAAATAAGGGG TERM 1941 1842621 - 1842605 - g 73 -3.7 -5.19275 | overlap 1842607 ATGGAGAAAAGAAAA TAGCAGT ATT ACTACCA GGTTCAACAGGTTAC CD1589 1842496 - 1843458 + | putative ribose ABC transporter,substrate-binding lipoprotein TERM 1942 1843488 - 1843518 + F 100 -8.5 -5.73563 | TAAATAAGATTTTTA GAGTTACTTTAGA AACTA TATAAAGTAACTC TTTTTTTAATTTAAT CD1590 1843830 - 1844462 + | hypothetical protein TERM 1943 1844494 - 1844511 + F 100 -11.3 -5.4251 | TTAGATTTTATTAGG GGTGGCA GATT TGCCACC TTTTTTGTGTCTAAA kdpA 1844994 - 1846688 + | potassium-transporting ATPase subunit A kdpB 1846713 - 1848770 + | potassium-transporting ATPase subunit B kdpC 1848789 - 1849415 + | potassium-transporting ATPase C chain TERM 1944 1849481 - 1849504 + F 100 -9 -5.65927 | opp_overlap 1849481 1849479 GTTAAATTTTAAAGA GTGAAAATCG ATAA TGATTTTCAC TTTTTTATTTGAATA TERM 1945 1849504 - 1849481 - f 74 -8.3 -3.43919 | opp_overlap 1849481, overlap 1849479 GTTAAATTTTAAAGA GTGAAAATC GATAAT GATTTTCAC TTTTTTATTTGAATA cysM 1849652 - 1850560 + | putative O-acetylserine sulfhydrylase cysA 1850578 - 1851177 + | serine acetyltransferase TERM 1946 1851529 - 1851576 + T 100 -16.8 -4.72631 | opp_overlap 1851535, overlap 1851531 1851535 1851547 GATGTGCATTAATAA AATAAATGCCTATAAAAATTGA ATTT TCAATTTTTATAGGCATTTGTC TTTTATTCAGTTAGT TERM 1947 1851531 - 1851574 + T 100 -19.4 -3.9716 | opp_overlap 1851535, overlap 1851529 1851535 1851547 TGTGCATTAATAAAA TAAATGCCTATAAAAATTGA ATTT TCAATTTTTATAGGCATTTG TCTTTTATTCAGTTA TERM 1948 1851535 - 1851570 + T 100 -18 -4.56159 | opp_overlap 1851535, overlap 1851531 1851529 1851547 CATTAATAAAATAAA TGCCTATAAAAATTGA ATTT TCAATTTTTATAGGCA TTTGTCTTTTATTCA TERM 1949 1851570 - 1851535 - T 100 -18 -4.90302 | opp_overlap 1851535 1851531 1851529 1851547 CATTAATAAAATAAA TGCCTATAAAAATTGA ATTT TCAATTTTTATAGGCA TTTGTCTTTTATTCA map2 1852448 - 1851579 - | methionine aminopeptidase TERM 1950 1852158 - 1852176 + g 71 -6 -4.50976 | TCCATTATAGTCTAG TGGAGC AGGGATA GCTCCA TTTTGTAGTGTAAAG CD1597 1853895 - 1852645 - | hypothetical protein TERM 1951 1853131 - 1853147 + g 70 -5.3 -4.61633 | TTCTTTAAGTGTCTG TAAATAT TTA ATATTTA TTTTTGCAAGTCTGT TERM 1952 1853964 - 1853974 + H 70 -2.6 -5.49579 | opp_overlap 1853964 TTTGAAAATTATAAT TTTT TTG AAAA TTTTATTTTTTATAA CD1598 1854180 - 1854491 + | putative endonuclease TERM 1953 1854711 - 1854733 + F 100 -13.6 -5.29385 | opp_overlap 1854715 ATATGCTATTTCTAA GCTATACCTA TTG TAGGTATAGC TTTTTTAATTAAGTT TERM 1954 1855243 - 1855233 - g 75 -4 -5.19251 | TAACAGGAATAAAAA TACA TAA TGTA GATGATATGAAGAGA thiD 1854776 - 1855570 + | putative phosphomethylpyrimidine kinase thiK 1855594 - 1856382 + | hydroxyethylthiazole kinase thiE1 1856405 - 1857037 + | thiamine-phosphate pyrophosphorylase CD1602 1857176 - 1857478 + | PTS system, IIB component TERM 1955 1857476 - 1857524 + T 100 -17.3 -3.73534 | opp_overlap 1857480 1857488, overlap 1857480 1857489 TTAGAAATATTAAAA TAAATAATAAAAGTGGATTCTAT ATA ATAGAGTCCATTTTTATTATTTG TTATTAATAGGCTTA TERM 1956 1857520 - 1857480 - T 100 -11.5 -4.79053 | opp_overlap 1857476 1857480 1857489, overlap 1857488 AAATATTAAAATAAA TAATAAAAGTGGATTCTAT ATA ATAGAGTCCATTTTTATTA TTTGTTATTAATAGG TERM 1957 1857480 - 1857520 + T 100 -15.9 -4.48713 | opp_overlap 1857480 1857488, overlap 1857476 1857489 AAATATTAAAATAAA TAATAAAAGTGGATTCTAT ATA ATAGAGTCCATTTTTATTA TTTGTTATTAATAGG TERM 1958 1857512 - 1857488 - T 73 -4.3 -5.10765 | opp_overlap 1857480 1857476 1857489, overlap 1857480 AAATAAATAATAAAA GTGGATTCTAT ATA ATAGAGTCCAT TTTTATTATTTGTTA TERM 1959 1857489 - 1857511 + T 100 -10 -5.44198 | opp_overlap 1857488 1857480, overlap 1857480 1857476 AATAAATAATAAAAG TGGATTCTAT ATA ATAGAGTCCA TTTTTATTATTTGTT CD1603 1858299 - 1857544 - | ABC transporter, permease protein CD1604 1859249 - 1858287 - | ABC transporter, ATP-binding protein CD1605 1859711 - 1859253 - | hypothetical protein TERM 1960 1859980 - 1859951 - H 86 -9.6 -3.95555 | opp_overlap 1859955 ATAAGTATTTACAAA TTAAGTGTATTA ATCGTA TAATACACTTAA TAGGATACTAGATAA CD1606 1860067 - 1860423 + | GntR family transcriptional regulator CD1607 1860495 - 1861211 + | ABC transporter, ATP-binding protein CD1608 1861204 - 1862028 + | putative ABC transporter, permease protein CD1609 1862040 - 1863239 + | hypothetical protein TERM 1961 1864048 - 1864034 - g 77 -7.2 -4.23213 | opp_overlap 1864033 CTTATATCTAATAAA CTTTTG AAG CAAAAG ATTGACTTTTAGGAG CD1610 1863245 - 1864060 + | hypothetical protein CD1611 1864071 - 1865339 + | hypothetical protein TERM 1962 1865404 - 1865438 + F 77 -3.1 -5.71712 | gap 2, opp_overlap 1865404 1865415 AGTATAAGTAAGGGA GTGTCTCA-AAG-TAAA CTT TTTAGCTCATGAGACAC TTTTTTTATATGAAA TERM 1963 1865527 - 1865582 + F 89 -9.6 -4.21322 | opp_overlap 1865525 1865536, overlap 1865529 1865536 TTTAAGAAAGACATT TATTTATAATTATATACAAAAATATT TTTT AATGTTTTTGTGTATAATTATAACAA TTTAATTTATATTAA TERM 1964 1865529 - 1865581 + F 85 -10.6 -3.11709 | gap 1, opp_overlap 1865525 1865536, overlap 1865527 1865536 TAAGAAAGACATTTA T-TTATAATTATATACAAAAATATT TTTT AATGTTTTTGTGTATAATTATAACA ATTTAATTTATATTA TERM 1965 1865536 - 1865573 + F 90 -10.3 -3.35327 | opp_overlap 1865525 1865536, overlap 1865529 1865527 GACATTTATTTATAA TTATATACAAAAATATT TTTT AATGTTTTTGTGTATAA TTATAACAATTTAAT TERM 1966 1866391 - 1866379 - g 71 -3.4 -5.25803 | AACTGGTATAAAAAA TGCA GTGCT TGCA GGAATTACTTCTATA CD1612 1865705 - 1866886 + | putative amidohydrolase TERM 1967 1866950 - 1866899 - T 90 -7.6 -5.00846 | opp_overlap 1866906 1866948 TAAATAGTATAAAAA TAAAAAAGAGTGTCTAAAGAAATT TTTA AATAATTATAGACACTCTTTTTTA TTAGTAATAATTAAA TERM 1968 1866906 - 1866943 + T 73 -3.5 -5.52023 | opp_overlap 1866899 TATAAAAATAAAAAA GAGTGTCTAAAGAAATT TTTA AATAATTATAGACACTC TTTTTTATTAGTAAT CD1613 1867945 - 1867028 - | hypothetical protein TERM 1969 1868177 - 1868138 - H 95 -8.2 -5.24531 | opp_overlap 1868129 1868142, overlap 1868139 ACTGTGTATAAAAAA GGTTTATATGTTATATTT ATAT AAATATAACATATGAACG AGAAAGGAGTGGTTT TERM 1970 1868176 - 1868139 - H 95 -11.7 -3.73995 | opp_overlap 1868129 1868142, overlap 1868138 CTGTGTATAAAAAAG GTTTATATGTTATATTT ATAT AAATATAACATATGAAC GAGAAAGGAGTGGTT TERM 1971 1868503 - 1868489 - g 81 -3.6 -5.54894 | AATTCAGCAAAAAAA GAAATA GGT TATCTC TCTGGAAATACAAAA CD1614 1868198 - 1868992 + | putative sodium extrusion ABC transporter,ATP-binding protein CD1615 1868993 - 1871053 + | putative sodium extrusion ABC transporter,permease protein TERM 1972 1871087 - 1871137 + F 100 -10 -4.78933 | opp_overlap 1871089, overlap 1871089 TATTAAAATATTAAT AAGCACTAAAGTATATGGATATAC CTT GTATATAAAAATACTTTAGTGCTA TTTTATATATTTTAA TERM 1973 1871089 - 1871135 + F 100 -12.6 -3.9872 | opp_overlap 1871089, overlap 1871087 TTAAAATATTAATAA GCACTAAAGTATATGGATATAC CTT GTATATAAAAATACTTTAGTGC TATTTTATATATTTT TERM 1974 1871135 - 1871089 - f 100 -12.6 -3.89411 | opp_overlap 1871089 1871087 TTAAAATATTAATAA GCACTAAAGTATATGGATATAC CTT GTATATAAAAATACTTTAGTGC TATTTTATATATTTT TERM 1975 1871217 - 1871162 - f 95 -11.8 -3.32647 | opp_overlap 1871162 TTTTAATTATATGAA TTATTTATCGTTTCATTTATGTAA TGAAAATG TTATATAAATGAAACAATAAATAA TTTTTATTTTAGAAA TERM 1976 1871162 - 1871217 + F 100 -13.2 -5.45802 | opp_overlap 1871162 TTTTAATTATATGAA TTATTTATCGTTTCATTTATGTAATG AAAA TGTTATATAAATGAAACAATAAATAA TTTTTATTTTAGAAA CD1616 1871735 - 1873279 + | putative signaling protein TERM 1977 1873321 - 1873341 + F 88 -4.7 -5.94713 | opp_overlap 1873321 AAATTGTGTTAAAAA TGGACTCTA ATG TAGTGTTCA TTTTTTTTGTAAAAT TERM 1978 1873345 - 1873355 + F 70 -2.6 -5.4588 | ATGTAGTGTTCATTT TTTT TGT AAAA TTTTTTATACTTTTA TERM 1979 1873407 - 1873434 + F 80 -10.2 -2.78384 | opp_overlap 1873407 CTTTGTATTATTATA TTATTGTATTAA CAAC TTAATACAATAA TATAATAAGGAGGCA TERM 1980 1873434 - 1873407 - f 80 -10.2 -2.82516 | opp_overlap 1873407 CTTTGTATTATTATA TTATTGTATTAA CAAC TTAATACAATAA TATAATAAGGAGGCA TERM 1981 1873539 - 1873522 - g 75 -5.7 -4.81851 | ATTTAAAGTTAAAAA TAATTTC AGGG GAAATTA AAATAGGATCTAAAT CD1617 1873455 - 1873823 + | GntR family transcriptional regulator CD1618 1873825 - 1874550 + | ABC transporter, ATP-binding protein CD1619 1874544 - 1875308 + | putative ABC transporter, peremase protein TERM 1982 1875322 - 1875355 + F 93 -9.8 -4.18983 | AAATGTTTTTATATG GAGCTATCTTTTGA GTAATG TTAAAAGATGGCTC TTATTATTTATGTAG CD1620 1875530 - 1876780 + | putative permease CD1621 1876973 - 1877857 + | putative mechanosensitive ion channel protein CD1622 1878219 - 1878836 + | putative lipoprotein TERM 1983 1881319 - 1881295 - g 70 -5.2 -4.67943 | overlap 1881309 1881310 TGGTAATATACAAAA TTTTGATAAA GAAAT TTCATCAAAA GATGAAGGTCAAAGA CD1623 1878944 - 1881475 + | putative nitric oxide reductase flavoprotein vanR 1881909 - 1882610 + | two-component response regulator TERM 1984 1882673 - 1882693 + G 71 -5.5 -4.37534 | TTATGAGAACAGCTT TAATGGC ATTTATA GCCATTA TTTTCATATGGATTT vanS 1882600 - 1883742 + | two-component sensor histidine kinase TERM 1985 1883841 - 1883787 - f 100 -11.3 -4.59342 | gap 2, opp_overlap 1883793 1883814, overlap 1883791 1883793 1883814 TTTAGGATAAATAAA TAAAGAGCACTCTTGTTATTGATATAA TTA CTGTATCAA-AACAAGAGTGCT-TTTA TTTTGATACAGTAAT TERM 1986 1883838 - 1883791 - f 100 -10.2 -4.83246 | gap 1, opp_overlap 1883793 1883814, overlap 1883787 1883793 1883814 GGATAAATAAATAAA GAGCACTCTTGTTATTGATATAA TTA CTGTATCAA-AACAAGAGTGCTT TTATTTTGATACAGT TERM 1987 1883793 - 1883836 + F 100 -14.3 -5.13722 | gap 1, opp_overlap 1883793 1883791 1883787 1883814, overlap 1883814 ATAAATAAATAAAGA GCACTCTTGTTATTGATATA ATTAC TGTATCAA-AACAAGAGTGC TTTTATTTTGATACA TERM 1988 1883836 - 1883793 - f 100 -12.8 -4.01049 | gap 1, opp_overlap 1883793 1883814, overlap 1883791 1883787 1883814 ATAAATAAATAAAGA GCACTCTTGTTATTGATATAA TTA CTGTATCAA-AACAAGAGTGC TTTTATTTTGATACA TERM 1989 1883814 - 1883855 + F 95 -12.7 -3.51924 | opp_overlap 1883793 1883791 1883787 1883814, overlap 1883793 TTGTTATTGATATAA TTACTGTATCAAAACAAGA GTGC TTTTATTTTGATACAGTAA TTATATCAATAGAAA TERM 1990 1883855 - 1883814 - f 95 -12.7 -3.51924 | opp_overlap 1883793 1883814, overlap 1883793 1883791 1883787 TTGTTATTGATATAA TTACTGTATCAAAACAAGA GTGC TTTTATTTTGATACAGTAA TTATATCAATAGAAA vanG 1884003 - 1885103 + | putative D-alanine:D-alanine ligase (putative vancomycin/teicoplanin A-type resistance protein) CD1627 1885100 - 1885906 + | putative D-alanyl-D-alanine carboxypeptidase TERM 1991 1886294 - 1886320 + G 73 -8.8 -3.18869 | overlap 1886313 1886314 1886318 ATCATTTATGGTATC TACCTGCATCAA TTA TTGGTGCAAGTA TTGCATACTTTCTTG vanTG 1885924 - 1888062 + | serine/alanine racemase TERM 1992 1888219 - 1888185 - f 100 -11.6 -4.91712 | opp_overlap 1888147 1888185 TTTAAGTTATAAAAA GGTGATGTTTCAGATT TTT ATTTTGAAACATCACC TTTTTTGTTATAATA TERM 1993 1888185 - 1888219 + F 100 -13.8 -5.58179 | opp_overlap 1888185, overlap 1888147 TTTAAGTTATAAAAA GGTGATGTTTCAGATT TTT ATTTTGAAACATCACC TTTTTTGTTATAATA CD1629 1888376 - 1888996 + | hypothetical protein TERM 1994 1889059 - 1889008 - T 100 -19.4 -3.73224 | opp_overlap 1889008 1889013, overlap 1889013 TTAGCTTGTACGAAA TAAAACGTATCTTAAAATGATTTA GTAC TAAATTATTTTAAGATACGTTTTA TTTTTTGTATTAAGG TERM 1995 1889008 - 1889059 + T 100 -21.6 -5.47159 | opp_overlap 1889008 1889013, overlap 1889013 TTAGCTTGTACGAAA TAAAACGTATCTTAAAATGATTTA GTAC TAAATTATTTTAAGATACGTTTTA TTTTTTGTATTAAGG TERM 1996 1889054 - 1889013 - T 100 -14.9 -4.93877 | opp_overlap 1889008 1889013, overlap 1889008 TTGTACGAAATAAAA CGTATCTTAAAATGATTTA GTAC TAAATTATTTTAAGATACG TTTTATTTTTTGTAT TERM 1997 1889013 - 1889054 + T 100 -17.1 -5.51612 | opp_overlap 1889013 1889008, overlap 1889008 TTGTACGAAATAAAA CGTATCTTAAAATGATTTA GTAC TAAATTATTTTAAGATACG TTTTATTTTTTGTAT TERM 1998 1889062 - 1889081 + T 70 -4.4 -5.07971 | AAGATACGTTTTATT TTTTGTAT TAAG GTACAAAA TTTTTAGTTCTTTTG CD1630 1889698 - 1889162 - | putative membrane-associated metal-dependent hydrolase sodA 1890515 - 1889811 - | superoxide dismutase (Mn) TERM 1999 1892470 - 1892449 - g 71 -4.5 -4.7268 | overlap 1892444 AAATATGCAATAAAA CTTTTAGAT ACGC ATCTTAAAG GTCATAGAGATAATT asnB 1890688 - 1892562 + | asparagine synthetase TERM 2000 1892578 - 1892621 + T 90 -10.6 -3.33162 | gap 1, opp_overlap 1892581 1892584, overlap 1892581 1892584 TACTGTTTTCAATAT TAATCA-GAGGGCAAAAACAT GCA ATGTTTTCACCCTCTTGATTA TTATGGAATAGGATA TERM 2001 1892581 - 1892618 + T 73 -7.9 -3.80733 | gap 1, opp_overlap 1892581 1892584, overlap 1892578 1892584 TGTTTTCAATATTAA TCA-GAGGGCAAAAACAT GCA ATGTTTTCACCCTCTTGA TTATTATGGAATAGG TERM 2002 1892618 - 1892581 - T 95 -12.3 -3.36273 | gap 1, opp_overlap 1892578 1892581 1892584, overlap 1892584 TGTTTTCAATATTAA TC-AGAGGGCAAAAACAT GCA ATGTTTTCACCCTCTTGA TTATTATGGAATAGG TERM 2003 1892614 - 1892584 - T 100 -14.2 -2.84723 | opp_overlap 1892584 1892581 1892578, overlap 1892581 TTTCAATATTAATCA GAGGGCAAAAACAT GCA ATGTTTTCACCCTC TTGATTATTATGGAA TERM 2004 1892584 - 1892614 + T 89 -9.8 -3.58208 | opp_overlap 1892581 1892584, overlap 1892581 1892578 TTTCAATATTAATCA GAGGGCAAAAACAT GCA ATGTTTTCACCCTC TTGATTATTATGGAA CD1633 1894090 - 1892654 - | putative serine protease TERM 2005 1893501 - 1893481 - G 78 -6.9 -4.61868 | GATTTATATATAAAA TATCACACC CAA GTTGTGATA AAAAATATAAGAAAA CD1634 1894419 - 1894997 + | tellurium resistance protein CD1635 1895036 - 1895614 + | tellurium resistance protein TERM 2006 1895633 - 1895682 + F 72 -6.2 -4.41241 | gap 1, opp_overlap 1895629 1895644, overlap 1895642 1895644 1895647 AAGCAATATAATATA TTAAATATAA-ATAACCTATACA AATAA TGTATAGGTTATATTATATAAAA TTTTGTGGAGGTTTA TERM 2007 1895642 - 1895672 + F 75 -8.5 -3.54721 | opp_overlap 1895644, overlap 1895633 1895644 1895647 AATATATTAAATATA AATAACCTATACA AATAA TGTATAGGTTATA TTATATAAAATTTTG TERM 2008 1895644 - 1895670 + F 93 -11.1 -3.33814 | opp_overlap 1895644, overlap 1895642 1895633 1895647 TATATTAAATATAAA TAACCTATACA AATAA TGTATAGGTTA TATTATATAAAATTT TERM 2009 1895670 - 1895644 - f 100 -11.1 -4.3851 | opp_overlap 1895642 1895633 1895644 1895647 TATATTAAATATAAA TAACCTATACA AATAA TGTATAGGTTA TATTATATAAAATTT TERM 2010 1895647 - 1895667 + F 76 -8.4 -3.79874 | opp_overlap 1895644, overlap 1895644 1895642 1895633 ATTAAATATAAATAA CCTATACA AATAA TGTATAGG TTATATTATATAAAA TERM 2011 1895748 - 1895731 - g 71 -5.7 -4.46581 | CAAAAGGTGATAAAA TAGATTT AAAA AAATCTA ACCCAGGACTGAGTA TERM 2012 1896207 - 1896193 - g 72 -4.3 -5.03715 | overlap 1896196 ATTATTCTGAAAAAA CTACT CTTAT AGTAG GAGCTATATATAGAA CD1636 1895700 - 1896329 + | tellurium resistance protein TERM 2013 1897548 - 1897530 - g 74 -7.5 -3.98236 | AAACTGTATGATAAA CTCTACA GCTGA TGTAGAG CACAATGATGGTGAT TERM 2014 1897927 - 1897913 - g 77 -10 -2.9756 | overlap 1897912 1897915 AAGCTGAAGAAGAAG CAGCAG TAA CTGCTG AAAGTGATGCTATGA CD1637 1896319 - 1899078 + | putative calcium-transporting ATPase TERM 2015 1899136 - 1899100 - f 100 -10.4 -4.77165 | gap 1, opp_overlap 1899104 TTTTTTAGAAGAAAA CAGA-CTGACTCAAAAT ATGA ATTTTGGGTCAGTTCTG AATAAACATTTAAAT TERM 2016 1899104 - 1899131 + F 95 -12.2 -3.36175 | opp_overlap 1899100 TTAGAAGAAAACAGA CTGACTCAAAAT ATGA ATTTTGGGTCAG TTCTGAATAAACATT TERM 2017 1899813 - 1899799 - g 88 -5.8 -5.64304 | opp_overlap 1899792, overlap 1899792 TAATAGAAGAAAAAA TTTCTT TTG AAGAAA GGGTTATTTTAGGGG TERM 2018 1900451 - 1900424 - g 71 -8 -3.39505 | gap 1, opp_overlap 1900429, overlap 1900428 1900429 1900441 ACTTCACATGGATAA GAAATTTGTTCAT ATG ATGAACA-ATTTC GATTACTCACTTATA TERM 2019 1900448 - 1900428 - g 70 -5.5 -4.34488 | opp_overlap 1900429, overlap 1900424 1900429 1900441 CACATGGATAAGAAA TTTGTTCAT ATG ATGAACAAT TTCGATTACTCACTT TERM 2020 1900429 - 1900447 + G 80 -9 -3.78597 | opp_overlap 1900428 1900424 1900429 1900441 ACATGGATAAGAAAT TTGTTCAT ATG ATGAACAA TTTCGATTACTCACT TERM 2021 1900447 - 1900429 - g 73 -9 -3.1997 | opp_overlap 1900429, overlap 1900428 1900424 1900441 ACATGGATAAGAAAT TTGTTCAT ATG ATGAACAA TTTCGATTACTCACT CD1638 1899165 - 1900727 + | hypothetical protein CD1639 1900728 - 1901864 + | putative tellurite resistance protein TERM 2022 1901876 - 1901900 + F 73 -7.2 -4.19483 | opp_overlap 1901876 GTAGTATTATATTAA GGGCTAATTT GTATA AAGTTGGCCC TTTCTATGTATATGA CD1640 1901928 - 1903004 + | hypothetical protein TERM 2023 1903603 - 1903620 + G 73 -5.7 -4.55287 | GATTTTGTATACTTA TTTAAAG GAAA CTTTAAA TTTTATATAGATGAA CD1641 1902982 - 1904130 + | hypothetical protein CD1642 1904274 - 1905362 + | hypothetical protein CD1643 1905390 - 1906181 + | hypothetical protein CD1644 1906859 - 1906296 - | putative transcriptional regulator TERM 2024 1907702 - 1907688 - g 77 -5.8 -4.87892 | GGGGAAGAAAAGAAA TATCTT TAA AAGATA TAGCAATAGCCATTG CD1645 1907045 - 1908247 + | hypothetical protein TERM 2025 1909042 - 1909070 + G 73 -8.3 -3.39327 | AGATTTAATACATTT GGTTGACCATATA GAC TATATGGTAAATC TTATAGGTATAGAAC CD1646 1908323 - 1909303 + | putative dipeptidase TERM 2026 1909395 - 1909423 + F 100 -10.5 -5.47159 | overlap 1909382 TTTATTAAATTTTAA TGTTACTAGAAGT TTC AATTCTAGTAACA TTTTTTATGTTAAAA TERM 2027 1909793 - 1909765 - g 70 -5.3 -4.52897 | overlap 1909766 1909783 1909784 ATAAGTAAGAATAAA TTTGTATCACCTA CAA CAGGTGCTACAAT AGATGCAGCACAATT TERM 2028 1909792 - 1909766 - g 74 -8.8 -3.30112 | overlap 1909765 1909783 1909784 TAAGTAAGAATAAAT TTGTATCACCTA CAA CAGGTGCTACAA TAGATGCAGCACAAT CD1647 1909546 - 1910499 + | putative iron compound ABC transporter, permease protein CD1648 1910489 - 1911445 + | putative iron compound ABC transporter, permease protein CD1649 1911442 - 1912197 + | putative iron compound ABC transporter,ATP-binding protein TERM 2029 1912317 - 1912301 - g 74 -2.1 -5.5353 | GATATGAATAAAAAA GCAGCAA TAG TAGCAGC AATAGCTATTATAGG CD1650 1912289 - 1913254 + | putative iron compound ABC transporter,substrate-binding protein TERM 2030 1913305 - 1913336 + F 100 -14 -5.08824 | opp_overlap 1913305 1913309 AAAATGATTATCAAA TAAACTAGGAGTTT TTAA GAACTCCTAGTTTA TTTTTTGCATAAAAA TERM 2031 1913336 - 1913305 - f 100 -13.3 -3.83705 | opp_overlap 1913305, overlap 1913309 AAAATGATTATCAAA TAAACTAGGAGTT TTTAAG AACTCCTAGTTTA TTTTTTGCATAAAAA TERM 2032 1913332 - 1913309 - f 93 -9.7 -4.51743 | opp_overlap 1913305, overlap 1913305 TGATTATCAAATAAA CTAGGAGTT TTTAAG AACTCCTAG TTTATTTTTTGCATA TERM 2033 1914168 - 1914158 - g 70 -4 -4.89567 | overlap 1914151 1914159 GTTTAAAATAGAAAA CTTT TCT AAAG AAAAAAGTAATTACT CD1651 1913736 - 1915595 + | putative signaling protein TERM 2034 1915873 - 1915844 - T 100 -12.3 -5.24129 | opp_overlap 1915848 TTTTTCTATAAAAAA GAGACTATGAGAA AATT TACTCATAGTCTC CTAAATAATGTATTT CD1652 1916486 - 1915887 - | putative tellurium resistance protein CD1653 1917386 - 1916589 - | putative lipoprotein TERM 2035 1917485 - 1917460 - R 100 -10.5 -5.46706 | opp_overlap 1917463 1917481, overlap 1917463 ACTGCAAAATAAAAA TAAGCCTGAGT TTAA ACTCAGGCTTT AAAAGCTAATTTAGA TERM 2036 1917482 - 1917463 - R 100 -12.2 -4.80077 | opp_overlap 1917463 1917481, overlap 1917460 GCAAAATAAAAATAA GCCTGAGT TTAA ACTCAGGC TTTAAAAGCTAATTT TERM 2037 1917463 - 1917482 + r 95 -12.2 -3.56836 | opp_overlap 1917460 1917463, overlap 1917481 GCAAAATAAAAATAA GCCTGAGT TTAA ACTCAGGC TTTAAAAGCTAATTT lplA 1918682 - 1917696 - | putative lipoate-protein ligase TERM 2038 1919074 - 1919098 + H 100 -14.4 -5.52347 | TATTGTAATGTTTAA GCCTTGAGTG TTTAC CACTCAAGGC TTTTTTAGTTTTATT TERM 2039 1920637 - 1920657 + G 74 -8.3 -3.59979 | opp_overlap 1920636 TAACAGGTGCAATAT TTGGAGACC ATT GTTCTCCAA TTTCAGATACAACAA CD1655 1919166 - 1920896 + | putative Na+/H+ antiporter TERM 2040 1921139 - 1921150 + F 83 -3.6 -5.89659 | overlap 1921119 TGCTGGCTTTCGGAG TGGG CTAT CCCG TTTTTATTTTTTTGT TERM 2041 1921181 - 1921199 + F 100 -8.2 -5.60993 | overlap 1921196 ATATATAATAGATTG GCACTTTA GTA TAAGGTGC TTTTTTTATAGGCAA TERM 2042 1921524 - 1921514 - g 78 -4 -5.33985 | CTTAAAAAAAATAAA TCAA TGC TTGA TAAGAAGTATCCATT CD1656 1921421 - 1921936 + | hypothetical protein TERM 2043 1922624 - 1922661 + F 76 -2 -5.93809 | AGGTATACAAACAGG GATATATAGGCTAGGA TTATTT TCCATGCTGATATATC TTTTTTTTATGAAAA CD1657 1922742 - 1925216 + | putative bi-functional glycine dehydrogenase/aminomethyl transferase protein TERM 2044 1925867 - 1925880 + G 76 -6.7 -4.41348 | opp_overlap 1925866 CTTATGCTTACTAAT CCAAG TACT CTTGG TTTATTTGAAAAAAA gcvPB 1925216 - 1926673 + | glycine dehydrogenase subunit 2 TERM 2045 1926728 - 1926756 + F 100 -8.3 -5.47431 | opp_overlap 1926728 AATTTATAAGAAAAA GCTATCTAACTTA ATC TAGTTTAGATAGC TTTTTTGTATATTAG TERM 2046 1926756 - 1926728 - f 80 -6.1 -5.21236 | opp_overlap 1926728 AATTTATAAGAAAAA GCTATCTAACTTA ATC TAGTTTAGATAGC TTTTTTGTATATTAG TERM 2047 1927795 - 1927778 - g 71 -7.1 -3.8211 | opp_overlap 1927776 1927778, overlap 1927781 TTGTAGGTATAATAA TAATTCC TCTA GGAATTA TATTGTTTGCAAAAC TERM 2048 1928875 - 1928892 + G 71 -4.9 -4.72272 | overlap 1928890 GTAATTAATAACATT CAAAGAG CATC TTCTTTG TTTTTAGTAAAGACA TERM 2049 1928890 - 1928908 + G 82 -5.4 -5.39221 | overlap 1928875 CAAAGAGCATCTTCT TTGTTTTT AGT AAAGACAA TTTTTTCATTCTTCT CD1659 1927096 - 1929453 + | cation-transporting ATPase TERM 2050 1929499 - 1929471 - T 70 -6.1 -4.20797 | opp_overlap 1929474, overlap 1929474 TTAAAATGATATAAA TAAGAGCAGTT TTAGTTG AACTGCTCTTT TTAGATGTGTTTAAT TERM 2051 1929496 - 1929474 - T 77 -7.8 -4.19324 | opp_overlap 1929474, overlap 1929471 AAATGATATAAATAA GAGCAGTT TTAGTTG AACTGCTC TTTTTAGATGTGTTT TERM 2052 1929474 - 1929496 + T 88 -8.5 -4.75356 | opp_overlap 1929471 1929474 AAATGATATAAATAA GAGCAGTTT TAGTT GAACTGCTC TTTTTAGATGTGTTT CD1660 1929856 - 1929539 - | hypothetical protein TERM 2053 1930236 - 1930222 - H 71 -8.6 -3.01912 | opp_overlap 1930213 TTATATGTAGAGATA GGATAG AAC CTATCC AATACTACTTGAATT tlpA 1930766 - 1930873 + | transposase-like protein A TERM 2054 1931159 - 1931148 - g 74 -3 -5.38951 | AATGCATATAAAAAA TTCT TTAA AGAA AAAACAGGATTTCCT TERM 2055 1931175 - 1931164 - g 74 -2.2 -5.63517 | TCTTTAAAGAAAAAA CAGG ATTT CCTA AATTTAAATCAAAGA TERM 2056 1931496 - 1931480 - g 73 -5.9 -4.58076 | AGAATTTATAGAAAA TCCTAAG TAT CTTAAGA AGTCATTAAACAAAC TERM 2057 1931715 - 1931699 - g 72 -6.7 -4.12296 | opp_overlap 1931696 TTTACAAGTAAAGAA TATGATT AAA AATCATA AACTATCTCGCTCAA tlpB 1930875 - 1931993 + | transposase-like protein B TERM 2058 1932020 - 1932006 - f 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG CD1662 1932169 - 1932924 + | hypothetical protein TERM 2059 1933098 - 1933085 - T 79 -3.9 -5.63517 | opp_overlap 1933089, overlap 1933089 GTGCTAAATAAAAAA GAAAT ACTT ATTTC AGGGATATTAGTATA TERM 2060 1933575 - 1933533 - T 72 -7.5 -3.60798 | gap 1, opp_overlap 1933534, overlap 1933529 1933536 AGTTGTATAAATTAA CCATAATATATAATTAAAAT TTTT ATTATAATTATATATTA-GG TTCTTCAATTAGTTT TERM 2061 1933534 - 1933575 + T 73 -7.7 -3.762 | opp_overlap 1933529 1933533 1933536 GTTGTATAAATTAAC CATAATATATAATTAAAAT TTTT ATTATAATTATATATTAGG TTCTTCAATTAGTTT TERM 2062 1933573 - 1933536 - T 73 -8.9 -2.92267 | opp_overlap 1933534, overlap 1933529 1933533 TGTATAAATTAACCA TAATATATAATTAAAAT TTTT ATTATAATTATATATTA GGTTCTTCAATTAGT guaD 1934835 - 1933564 - | guanine deaminase TERM 2063 1933818 - 1933796 - G 70 -6.4 -4.05322 | AAAGCCTCAGATAAA GATAAGAAAT TAT ACTTCTTACC AGAATTAACCCAATA TERM 2064 1934867 - 1934915 + r 91 -10.8 -3.51365 | gap 1, opp_overlap 1934871 1934882 1934883, overlap 1934882 TTAAATTTGTTTTAA TATATGTAGGTAAAATTTTGTTT TACA AATCAAAATTTTACC-ACATGTA TTATATCAAATCTAA TERM 2065 1934911 - 1934871 - R 78 -9.4 -3.06815 | gap 1, opp_overlap 1934867 1934882, overlap 1934882 1934883 ATTTGTTTTAATATA TGTAGGTAAAATTTTGTTT TACA AATCAAAATTTTACC-ACA TGTATTATATCAAAT TERM 2066 1937408 - 1937393 - R 89 -9 -4.67755 | AGAGGTATTTAAAAA GAGTGC ATAA GCACTC CAATTGTGAGAAATA TERM 2067 1937560 - 1937544 - R 90 -6.6 -5.75538 | opp_overlap 1937543 1937544 GGTAAAAAAGAAAAA GGAGTA TTTTG TACTCC ATTTGTCAAAAATAT TERM 2068 1937662 - 1937687 + r 100 -9.2 -4.96848 | opp_overlap 1937662 AAATAAAATAAAAAA GATAAATCCT AATCAA AGGATTTATC TTTTTGTATAGAAAA TERM 2069 1937687 - 1937662 - R 100 -9.2 -5.95449 | opp_overlap 1937662 AAATAAAATAAAAAA GATAAATCCT AATCAA AGGATTTATC TTTTTGTATAGAAAA CD1664 1938281 - 1937730 - | putative transcriptional regulator cysK 1938472 - 1939434 + | cysteine synthase A CD1666 1939729 - 1941573 + | putative glycerophosphoryl diester phosphodiesterase TERM 2070 1941603 - 1941630 + F 89 -8.7 -4.62783 | opp_overlap 1941603 TATTATCCAGTAAAA GAGATATTATT AAAATC AATAATATCTC TTTTTAACATAAATA TERM 2071 1941630 - 1941603 - f 89 -9.4 -4.28994 | opp_overlap 1941603 TATTATCCAGTAAAA GAGATATTATTA AAAT CAATAATATCTC TTTTTAACATAAATA CD1667 1941878 - 1942408 + | sugar O-acetyltransferase TERM 2072 1942634 - 1942665 + F 82 -10.4 -2.88212 | opp_overlap 1942640, overlap 1942640 AGCACTTATTTTTAA GTAAAATACTAACT TTTA GGTTAGTATTTTGC TATAGTATGATGATT TERM 2073 1942749 - 1942769 + F 82 -9.9 -2.96842 | overlap 1942746 1942760 TTACTTAGATATTTT CTTTTGATT AGT AATCAAAAG TGGTTATAATTTTTT TERM 2074 1943388 - 1943416 + F 91 -10.5 -3.54638 | opp_overlap 1943388 1943393, overlap 1943393 TTCTATAATGGGAAA GTAAAGATGTACT CCC AATACATCTTTAC TTTAGCAGAAGTTAT TERM 2075 1943416 - 1943388 - f 95 -12.7 -3.69354 | opp_overlap 1943388 1943393, overlap 1943393 TTCTATAATGGGAAA GTAAAGATGTACT CCC AATACATCTTTAC TTTAGCAGAAGTTAT TERM 2076 1943411 - 1943393 - f 71 -6.8 -4.08317 | opp_overlap 1943388 1943393, overlap 1943388 TAATGGGAAAGTAAA GATGTACT CCC AATACATC TTTACTTTAGCAGAA CD1668 1944262 - 1945284 + | hypothetical protein TERM 2077 1945331 - 1945321 - g 70 -4 -4.85822 | opp_overlap 1945321, overlap 1945316 ATTAGAAATAGAAAA TCTT TCA AAGA TATATGGTAAAAAAG CD1669 1945298 - 1946185 + | ABC transporter, ATP-binding protein CD1670 1946191 - 1946964 + | putative ABC transporter, permease protein CD1671 1947076 - 1947801 + | two-component response regulator TERM 2078 1948043 - 1948054 + G 70 -5.8 -4.26079 | opp_overlap 1948043 1948042 TAGAAAAATCAAATT CCTG GATA CAGG TTTTAAATGATTTAG TERM 2079 1948141 - 1948117 - g 72 -4.3 -5.04385 | opp_overlap 1948119, overlap 1948121 GATACTCCCAAAAAA TATACACCCTT TCA AATGGTGAATA ATTACAAGTATATAG TERM 2080 1948297 - 1948286 - g 78 -3 -5.6473 | opp_overlap 1948286, overlap 1948277 ATAACATTAAAAAAA CTTT AAAT AAAG TTATCATTATAACAC CD1672 1947805 - 1949208 + | two-component sensor histidine kinase TERM 2081 1949715 - 1949728 + G 72 -5.3 -4.7254 | CTTTATTTATGATTT TGGTA CCAG TACCA TTTTTAGTAGAAGGT CD1673 1949219 - 1950043 + | hypothetical protein TERM 2082 1950288 - 1950248 - T 90 -10.2 -3.74526 | opp_overlap 1950248 1950247 1950245 1950244 1950253, overlap 1950253 TTATTAATGTAATAA TAAAACAGAGGT-TTGATAT AAA AT-TCAATACCTCTGTTTTA GTGCTTTTTATCCTA TERM 2083 1950248 - 1950288 + T 79 -10.2 -2.59738 | opp_overlap 1950248 1950253, overlap 1950247 1950245 1950244 1950253 TTATTAATGTAATAA TAAAACAGAGGT-TTGATAT AAA AT-TCAATACCTCTGTTTTA GTGCTTTTTATCCTA TERM 2084 1950283 - 1950253 - T 75 -5.7 -4.91987 | opp_overlap 1950253 1950248 1950247 1950245 1950244, overlap 1950248 AATGTAATAATAAAA CAGAGGT-TTGATAT AAA AT-TCAATACCTCTG TTTTAGTGCTTTTTA CD1674 1950988 - 1950368 - | putative NADPH-dependent FMN reductase CD1675 1951254 - 1951586 + | putative transcriptional regulator TERM 2085 1951613 - 1951651 + T 70 -7.7 -3.30507 | gap 1, opp_overlap 1951613, overlap 1951611 1951609 TAGATACCATAAAAA GACTGTGAGTAAAATTGT TTGA ATAATCT-ACTCACAGTC TATATTTAAATTAAT TERM 2086 1951651 - 1951613 - T 90 -7.7 -4.96762 | gap 1, opp_overlap 1951613 1951611 1951609 TAGATACCATAAAAA GACTGTGAGTAAAATTGT TTGA ATAATCT-ACTCACAGTC TATATTTAAATTAAT TERM 2087 1951697 - 1951669 - T 75 -9.2 -2.60283 | opp_overlap 1951666 1951695, overlap 1951668 1951666 1951695 TATTTAAATTAATAG TTAGTATTTTTA ATTTA TAAAAATACTAA AAAATTTATTATGAA pcp 1952347 - 1951706 - | pyrrolidone-carboxylate peptidase TERM 2088 1951936 - 1951965 + g 100 -8.7 -5.18643 | gap 1, opp_overlap 1951935 1951936 GATTGCAAACAAATG TTCCTGC-AGTGTT TGA AACACTAGCTGGAA TTTTATTTTCATTCA TERM 2089 1951965 - 1951936 - G 70 -8.7 -2.55085 | gap 1, opp_overlap 1951936, overlap 1951935 GATTGCAAACAAATG TTCCTGC-AGTGTT TGA AACACTAGCTGGAA TTTTATTTTCATTCA CD1677 1953300 - 1952368 - | hypothetical protein TERM 2090 1952604 - 1952591 - G 72 -5.3 -4.76963 | TGAGACAATACAAAA GGAAT ACCA ATTCC TGCCGTTATGACTGA CD1678 1953987 - 1953322 - | hypothetical protein CD1678A 1954381 - 1954118 - | hypothetical protein TERM 2091 1954385 - 1954346 - G 100 -18.2 -4.9792 | opp_overlap 1954346 GATTTCATACAAAAA GAGAGTGTCTAATGAATT TTTT AGTTCATTAGACACTCTC TTTTTGTTATGATTA TERM 2092 1954346 - 1954385 + g 100 -20.4 -5.24416 | opp_overlap 1954346 GATTTCATACAAAAA GAGAGTGTCTAATGAATT TTTT AGTTCATTAGACACTCTC TTTTTGTTATGATTA CD1679 1955036 - 1954557 - | putative flavodoxin CD1680 1955443 - 1955039 - | putative FMN-binding exported protein CD1681 1956047 - 1955418 - | TetR family transcriptional regulator TERM 2093 1955810 - 1955826 + g 73 -5.9 -4.5477 | ATGAGCAATTATTCA TAATGTC AAT GGCATTA TTTTCTACTGTGTTA TERM 2094 1956306 - 1956327 + H 74 -8.9 -3.09505 | overlap 1956300 AATAAATTCTTTTAT GCTATAAAA TTTA TTTTATAGC TATTAAATCAGATGT iunH 1956556 - 1957524 + | inosine-uridine preferring nucleoside hydrolase TERM 2095 1957562 - 1957539 - g 72 -2.5 -5.45802 | opp_overlap 1957542, overlap 1957542 GTGTGAAAAGAAAAA TATGTGTAA AAACTA TTACACTTA TAGCTTTTGGTATTT TERM 2096 1957835 - 1957824 - g 73 -5.8 -4.62302 | opp_overlap 1957822 1957824, overlap 1957801 TAAGAGGTTTAAAAA CTCC ACTA GGAG TACTTTTATTTGCCA CD1683 1957526 - 1958089 + | hypothetical protein CD1684 1958097 - 1958786 + | radical SAM-superfamily protein TERM 2097 1958857 - 1958839 - f 100 -10.4 -4.57073 | opp_overlap 1958839 TATGTTTTTGAAAAA GCTTCTAA TAG TTAGAAGC TTTTTTTGTAGAGTT TERM 2098 1958839 - 1958857 + F 100 -10.4 -5.63504 | opp_overlap 1958839 TATGTTTTTGAAAAA GCTTCTAA TAG TTAGAAGC TTTTTTTGTAGAGTT CD1685 1958913 - 1959641 + | hypothetical protein CD1686 1959655 - 1960329 + | putative DNA-binding protein CD1687 1960346 - 1961191 + | putative lipoprotein CD1688 1961207 - 1961878 + | two-component response regulator CD1689 1961868 - 1963100 + | two-component sensor histidine kinase trxA1 1963250 - 1963567 + | thioredoxin trxB1 1963575 - 1964462 + | thioredoxin reductase TERM 2099 1964535 - 1964503 - f 100 -18.1 -5.29782 | opp_overlap 1964503 GATATTTATAAAAAA CTGTCTTGAAATAAT TTT ATTATTTCAAGACAG TTTTTTATTTTTAAG TERM 2100 1964503 - 1964535 + F 100 -18.1 -5.93252 | opp_overlap 1964503 GATATTTATAAAAAA CTGTCTTGAAATAAT TTT ATTATTTCAAGACAG TTTTTTATTTTTAAG CD1692 1964732 - 1965100 + | transcription regulator ArsR CD1693 1965103 - 1965474 + | putative dinitrogenase iron-molybdenum cofactor TERM 2101 1965510 - 1965481 - T 100 -10.9 -5.88471 | opp_overlap 1965481 1965483, overlap 1965483 CATCATTAAAAAAAA CAGCTGATGAAAT ATAT ACTTCATCAGCTA TTTTTTCTTTTAATA TERM 2102 1965481 - 1965510 + T 93 -6.5 -5.83211 | opp_overlap 1965481 1965483, overlap 1965483 CATCATTAAAAAAAA CAGCTGATGAAAT ATAT ACTTCATCAGCTA TTTTTTCTTTTAATA TERM 2103 1965483 - 1965508 + T 86 -9.1 -4.53077 | opp_overlap 1965481 1965483, overlap 1965481 TCATTAAAAAAAACA GCTGATGAAAT ATAT ACTTCATCAGC TATTTTTTCTTTTAA TERM 2104 1965508 - 1965483 - T 100 -11.3 -4.5787 | opp_overlap 1965483 1965481, overlap 1965481 TCATTAAAAAAAACA GCTGATGAAAT ATAT ACTTCATCAGC TATTTTTTCTTTTAA CD1694 1966073 - 1965618 - | hypothetical protein CD1695 1967377 - 1966112 - | putative arsenical pump membrane protein TERM 2105 1966840 - 1966818 - G 72 -8.6 -2.90725 | overlap 1966813 1966808 CTAAAGCATATTATA GTTATAGCAA GTA TTACTATAAC AGCAGGACCTAAATT TERM 2106 1966898 - 1966879 - G 71 -7.2 -3.76789 | opp_overlap 1966876, overlap 1966875 AATCCATAAAACTAA GATTGGCA GCAC TACCAATC ATAATATTTGGAGGG CD1696 1967847 - 1969298 + | putative sodium:amino acid symporter TERM 2107 1969369 - 1969397 + T 100 -14.9 -5.9218 | opp_overlap 1969369 1969365 1969374 TATTGAATTAATTTA TATTACTGGAATT TTT AATTCCAGTAATA TTTTTTTATTATATA TERM 2108 1969397 - 1969369 - T 100 -14.9 -2.6072 | opp_overlap 1969369, overlap 1969365 1969374 TATTGAATTAATTTA TATTACTGGAATT TTT AATTCCAGTAATA TTTTTTTATTATATA TERM 2109 1969392 - 1969374 - T 81 -10.4 -2.67477 | opp_overlap 1969369, overlap 1969369 1969365 AATTAATTTATATTA CTGGAATT TTT AATTCCAG TAATATTTTTTTATT ribH 1969967 - 1969506 - | riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase) TERM 2110 1970049 - 1970039 - R 81 -5.4 -5.37345 | TTTAATTATAAAAAA CTAC TTA GTAG AAAAATATCATCATA ribA 1971265 - 1970072 - | riboflavin biosynthesis protein ribB 1971953 - 1971288 - | riboflavin synthase subunit alpha ribD 1973099 - 1971987 - | riboflavin biosynthesis protein TERM 2111 1973145 - 1973164 + H 83 -9.3 -3.63068 | opp_overlap 1973145 TTTTTAAACAAAAAA CCCTGAG AATTAA CTCAGGG TTTAGAATAATCTAC TERM 2112 1973164 - 1973145 - H 100 -9.3 -5.63517 | opp_overlap 1973145 TTTTTAAACAAAAAA CCCTGAG AATTAA CTCAGGG TTTAGAATAATCTAC TERM 2113 1973218 - 1973197 - H 79 -8.1 -4.19371 | TAAATGTTTAATAAA TGTAGAACA AAAT TGCTCTACA AAAACACTCATTAAA TERM 2114 1975527 - 1975513 - g 70 -5.7 -4.32678 | opp_overlap 1975513, overlap 1975510 CTTTGAAAGAAATAA GTGGA AGATA TCCAC TTGATGAAGAACAAT recQ 1973541 - 1976024 + | ATP-dependent DNA helicase TERM 2115 1976294 - 1976318 + F 91 -5.1 -6.09196 | gap 1, opp_overlap 1976292 1976294 TATACGATTATAAGA GTGC-TTTCC AAACGA GGAAAAGCAC TTTTTTTATTTTCAA TERM 2116 1977625 - 1977609 - g 70 -5.1 -4.57569 | CTATGTGTGGAAAAA TGTGCTC AAT GAGAACA GTTAAGAAAATATTA thiC 1976366 - 1977667 + | thiamine biosynthesis protein ThiC thiS 1977721 - 1977915 + | putative thiamine biosynthesis protein TERM 2117 1978175 - 1978212 + G 76 -9.3 -3.20029 | opp_overlap 1978209 1978211, overlap 1978173 1978172 AAAAAAGGGAAAGTT GCTATATTGGGATTGGG GGGA CTTGGTTCCAATATAGC TATCTCTTTAGCTAG thiF 1977908 - 1978711 + | putative thiamine biosynthesis protein thiG 1978774 - 1979544 + | thiazole synthase thiH 1979561 - 1980664 + | thiamine biosynthesis protein ThiH thiE2 1980665 - 1981354 + | putative thiamine biosynthesis protein TERM 2118 1981384 - 1981441 + F 95 -11.3 -3.78775 | gap 1, opp_overlap 1981386 1981399, overlap 1981386 1981399 TGAATTTTTAACTTA AATA-AAAATAAAAAAGTTATCTTTTAA ATT TTAAAAGGTAGCTTTTTTATTTTATATC TTTGCTAATAAAAAA TERM 2119 1981386 - 1981439 + F 100 -13.9 -3.48024 | gap 1, opp_overlap 1981386 1981399, overlap 1981384 1981399 AATTTTTAACTTAAA TA-AAAATAAAAAAGTTATCTTTTAA ATT TTAAAAGGTAGCTTTTTTATTTTATA TCTTTGCTAATAAAA TERM 2120 1981439 - 1981386 - f 84 -9.5 -3.75897 | gap 1, opp_overlap 1981384 1981386 1981399, overlap 1981399 AATTTTTAACTTAAA TA-AAAATAAAAAAGTTATCTTTTAA ATT TTAAAAGGTAGCTTTTTTATTTTATA TCTTTGCTAATAAAA TERM 2121 1981399 - 1981425 + F 100 -8.2 -5.8901 | opp_overlap 1981386 1981399, overlap 1981386 1981384 AATAAAAATAAAAAA GTTATCTTTTAA ATT TTAAAAGGTAGC TTTTTTATTTTATAT TERM 2122 1981425 - 1981399 - f 86 -3.8 -6.01725 | opp_overlap 1981399 1981386 1981384, overlap 1981386 AATAAAAATAAAAAA GTTATCTTTTAA ATT TTAAAAGGTAGC TTTTTTATTTTATAT TERM 2123 1982062 - 1982043 - g 73 -9.2 -2.64735 | ATTGTATTTATAGGA GCAGCAGC AGGA GCCGCCGC TTCAACAATAAATCC TERM 2124 1982116 - 1982130 + G 75 -10 -2.52896 | CACTAGCTCAACTTG CTCCTG GTT CAGGAG TAACTTACAGAGTAG CD1707 1981542 - 1982936 + | putative C4-dicarboxylate anaerobic carrier TERM 2125 1982996 - 1983028 + F 100 -12.3 -5.56264 | opp_overlap 1983000 ATAATATGTTTTCAA TAAATTGCCACTAAT TTA ATTAGTGGTAATTTG TTTTTTGTATTTAAA TERM 2126 1983024 - 1983000 - f 82 -8.7 -4.1552 | opp_overlap 1982996 TATGTTTTCAATAAA TTGCCACTAAT TTA ATTAGTGGTAA TTTGTTTTTTGTATT CD1708 1983453 - 1984820 + | hypothetical protein TERM 2127 1984837 - 1984852 + F 100 -10.4 -4.65838 | AGGTTAATGCTGAAG TGGCGC TAAT GCGCCA TTTTTCAAATATATA CD1709 1984845 - 1985453 + | putative molybdopterin-guanine biosynthesis protein CD1710 1985501 - 1985872 + | hypothetical protein CD1711 1986051 - 1986389 + | hypothetical protein TERM 2128 1986410 - 1986437 + F 80 -3.4 -5.95539 | opp_overlap 1986401, overlap 1986401 AAATAGTTAAAAAGA GGCATCTTTTAA AAAT TTTATGGATGCC TTTTTTTATTTGAAA moaB 1986855 - 1987358 + | putative molybdenum cofactor biosynthesis protein TERM 2129 1987604 - 1987615 + G 73 -5.8 -4.57755 | AAATTAGATTTACTG GAGG AGAA CCTC TTTTATATCCTAAAT moaA 1987405 - 1988364 + | molybdenum cofactor biosynthesis protein moaC 1988368 - 1988838 + | molybdenum cofactor biosynthesis protein C CD1715 1988874 - 1989305 + | putative molybdenum cofactor sulfurase TERM 2130 1989426 - 1989447 + F 87 -5.9 -5.63236 | opp_overlap 1989426 TATTGGTTATATAAA GCTATGAAT GTAA AATCATAGC TTTTTGTTTTTGAAT TERM 2131 1989938 - 1989963 + F 100 -14.1 -5.55769 | overlap 1989926 ACACGGATTTATATT CGTCTCTTGGA TTTT TCCAAGAGGCG TTTTTTATTATAAAC CD1716 1990110 - 1991399 + | permease TERM 2132 1992318 - 1992308 - g 83 -6.8 -5.055 | opp_overlap 1992307, overlap 1992309 TTAATTGCCAAAAAA GGTG ATA CACC ACTTTGTATTACACC CD1717 1991453 - 1992532 + | hypothetical protein TERM 2133 1992967 - 1992926 - gf 78 -5.4 -5.14965 | gap 2, opp_overlap 1992938 AGTTTGATTAAAAAA TAGCTACGCACACTCGTGAC TTTA GTCATGAGT-TA-GTAGCTA AATTAGTCAGCATAT TERM 2134 1992938 - 1992957 + GF 73 -8.6 -3.19389 | opp_overlap 1992926 AAATAGCTACGCACA CTCGTGAC TTTA GTCATGAG TTAGTAGCTAAATTA TERM 2135 1993020 - 1993006 - gf 72 -8.6 -3.01912 | opp_overlap 1992997, overlap 1992990 CTATATGTAGAGATA GGATAG AAC CTATCC AATACTACTTGAATT TERM 2136 1993851 - 1993840 - g 74 -3 -5.38951 | AATGCATATAAAAAA TTCT TTAA AGAA AAAGCAGGATTTCCT TERM 2137 1994188 - 1994172 - g 73 -5.9 -4.58076 | AGAATTTATAGAAAA TCCTAAG TAT CTTAAGA AGTCATTAAACAAAC tlpB 1993567 - 1994685 + | transposase-like protein B TERM 2138 1994712 - 1994698 - gT 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG CD1718 1992553 - 1995981 + | putative hydantoinase TERM 2139 1996091 - 1996136 + T 73 -7.2 -4.02581 | gap 2, overlap 1996095 ATTCTTATAAGTTTC CGAACAGCCGATATATACCT ATTTTTTG AGGT-T-TATCGGCTGTTTG TTATCTTTTATCGCA CD1721 1996686 - 1996144 - | hypothetical protein TERM 2140 1996795 - 1996827 + r 78 -5.7 -5.1356 | opp_overlap 1996782 1996801, overlap 1996801 AATTTTTTTAATATA AAAAAATCGGTGC TTAATTT GTACCGATTTTTG TTTTTCTTAGTAAAG TERM 2141 1996801 - 1996821 + r 84 -4.7 -5.74684 | opp_overlap 1996801, overlap 1996795 TTTAATATAAAAAAA TCGGTGC TTAATTT GTACCGA TTTTTGTTTTTCTTA TERM 2142 1996821 - 1996801 - R 73 -2.5 -5.80817 | opp_overlap 1996801 1996795 TTTAATATAAAAAAA TCGGTGC TTAATTT GTACCGA TTTTTGTTTTTCTTA CD1722 1997118 - 1996834 - | putative transcriptional regulator TERM 2143 1997186 - 1997141 - R 84 -5.2 -5.75945 | opp_overlap 1997149 1997173 1997181, overlap 1997181 ACCTCTTAAAAAAAA TTCTAACATTAAAATTTTTT TTAGTC AATAAATTTTAATATTAAAA TTCTTTAAATGTTTT CD1723 1997945 - 1997181 - | acyltransferase TERM 2144 1997364 - 1997382 + g 85 -4.6 -5.52023 | AATAGGTTGGTATCC TTCATAAG TAT CTTTTGAA TTTTTTATTACTAGT TERM 2145 1998155 - 1998178 + r 75 -8.2 -3.5936 | opp_overlap 1998155, overlap 1998146 ATTTAATTATAAAAA CTGTTGCAGA AATT TCTACAACAG TTTAAAAAATTTACC TERM 2146 1998178 - 1998155 - R 100 -10.4 -4.98857 | opp_overlap 1998146 1998155 ATTTAATTATAAAAA CTGTTGCAGA AATT TCTACAACAG TTTAAAAAATTTACC CD1724 1998493 - 1998227 - | hypothetical protein CD1725 1999344 - 1998535 - | AraC family transcription regulator TERM 2147 1998631 - 1998617 - G 70 -5.8 -4.29981 | opp_overlap 1998608 1998616 1998630, overlap 1998608 1998630 CAAATAGATTTAAAA TCATTT ATA AAATGA GATTGGTCGTAATAA CD1726 1999657 - 1999938 + | hypothetical protein TERM 2148 2000055 - 2000029 - f 75 -8.2 -3.52459 | opp_overlap 2000029 AGTAATGGTACAGAA TACACATTTATA ATT TATAGATGTGTA TTTTTTGTTTAAAAA TERM 2149 2000029 - 2000055 + F 100 -10.4 -5.63517 | opp_overlap 2000029 AGTAATGGTACAGAA TACACATTTATA ATT TATAGATGTGTA TTTTTTGTTTAAAAA CD1727 2000187 - 2000456 + | hypothetical protein CD1728 2000501 - 2000824 + | hypothetical protein TERM 2150 2001047 - 2001025 - T 73 -7.2 -4.04806 | TTGGATATTAAATAA TATGTAAATA CAC CATTTACATA TAAAAGTTTAATTAA TERM 2151 2001670 - 2001660 - T 73 -2.6 -5.65927 | TATCCAAATAAAAAA TAAT CTT ATTA CATTATTGAATGAAG TERM 2152 2001914 - 2001873 - T 100 -8.3 -5.39721 | opp_overlap 2001873 2001876 GTATTACATAAAAAA TAAGAAGCCATAAATGATA TAAG CATTATCTATAGCTTCTTA CTTCTCATTGATTAA CD1729 2003570 - 2001951 - | putative sodium/phosphate cotransporter CD1729A 2004192 - 2003882 - | putative transcriptional regulator (partial) TERM 2153 2004357 - 2004305 - R 83 -9.7 -3.51633 | opp_overlap 2004310 2004314, overlap 2004310 2004320 ATATATTGGATATAA TATAATTAAGATAAACTCTGTAT TAAGAGG ATATATAGTTTATCTTAATTATA GGGGAAGTGAGGATA TERM 2154 2004310 - 2004352 + r 72 -8.1 -3.29144 | opp_overlap 2004305 2004310 2004320, overlap 2004314 TTGGATATAATATAA TTAAGATAAACTCTGTATT AAGAG GATATATAGTTTATCTTAA TTATAGGGGAAGTGA TERM 2155 2004626 - 2004572 - R 73 -7.7 -3.70694 | gap 1, opp_overlap 2004577, overlap 2004566 2004577 AAACATAGATAAACA TAAAAGAGGTTTATATTTATTTGTAT GATT ATA-AAATAAATACAAGCCTCTTTTT TTGATAAATATAAAA TERM 2156 2004621 - 2004577 - R 86 -7.6 -4.87328 | gap 1, opp_overlap 2004577, overlap 2004566 2004572 TAGATAAACATAAAA GAGGTTTATATTTATTTGTAT GATT ATA-AAATAAATACAAGCCTC TTTTTTTGATAAATA TERM 2157 2004577 - 2004621 + r 100 -7.6 -5.53991 | gap 1, opp_overlap 2004566 2004577 2004572 TAGATAAACATAAAA GAGGTTTATATTTATTTGTAT GATT ATA-AAATAAATACAAGCCTC TTTTTTTGATAAATA CD1730 2005469 - 2004657 - | putative ATP-binding protein TERM 2158 2005795 - 2005783 - H 84 -4.9 -5.75945 | ATTTGCTAAAAAAAA CAATT AAA AATTG TAAAGAAAAAAGATA CD1731 2005891 - 2007042 + | putative acetyltransferase CD1732 2007160 - 2007798 + | putative corrinoid protein CD1733 2007799 - 2008821 + | putative methyltransferase CD1734 2008811 - 2009431 + | hypothetical protein CD1735 2010244 - 2009558 - | putative hydrolase CD1736 2010803 - 2010258 - | putative transcriptional regulator TERM 2159 2010322 - 2010335 + g 72 -6.7 -4.18401 | TGCCATTTATGTTTT GTTCC TAAA GGAAC TTTTACACTATCTCC TERM 2160 2011827 - 2011813 - g 71 -7.2 -3.8377 | AATTGTCACAGGAAA CTTGAA CAA TTCAAG AGAATATTTAGCTTT TERM 2161 2012029 - 2012047 + G 70 -8.2 -3.12923 | opp_overlap 2012027 2012025 2012042, overlap 2012015 2012027 2012025 2012042 AGCATCATCAACAGC TGGTGCTA CTA TAGCATCA TCTACTTTTCATGAT CD1737 2011031 - 2012278 + | putative gluconate permease TERM 2162 2012629 - 2012654 + G 95 -7.7 -5.45802 | opp_overlap 2012629 GTTGATTTAATAAAT TCTCTGTCAAT TCAA ATTGGTAGAGA TTTTTATTTTAAACC TERM 2163 2012926 - 2012960 + G 82 -8.7 -3.88498 | opp_overlap 2012925 CAAGATATAAACATT TTGTTGACTCCAG ATATAAAGA CTGGAGTCAACCA TTTAATGTCTGGAAA CD1738 2012365 - 2014359 + | two-component sensor histidine kinase TERM 2164 2014426 - 2014414 - g 74 -2 -5.63103 | overlap 2014415 TGGTAATGAAAAAAA TTCT ACAAA AGAA GGGCTATCTTGTAGA CD1739 2014359 - 2015681 + | two-component response regulator TERM 2165 2015708 - 2015690 - f 79 -3.9 -5.66684 | opp_overlap 2015679, overlap 2015679 2015674 2015691 2015701 TAAGTGAGAAAAAAA CTTCTCA TTAAG TGAGAAA AAAATTTCTCAAACT TERM 2166 2015757 - 2015733 - f 95 -10.2 -4.29432 | opp_overlap 2015733, overlap 2015739 CAAACTGTATTAAAA GATAAACAGA AAAAA TCTGTTTATC TTTTTTTATTATAAT TERM 2167 2015733 - 2015757 + F 100 -10.2 -5.89921 | opp_overlap 2015733 2015739 CAAACTGTATTAAAA GATAAACAGA AAAAA TCTGTTTATC TTTTTTTATTATAAT grdG 2015960 - 2017246 + | sarcosine reductase complex component B alpha subunit TERM 2168 2017410 - 2017398 - g 75 -5.5 -4.8048 | GGTGGAGAGGAAAAA GCAGA TAT TCCGC CAGAAAAAAGGGCTG grdF 2017332 - 2018639 + | sarcosine reductase complex component b beta subunit TERM 2169 2018672 - 2018711 + F 100 -8.2 -6.11243 | opp_overlap 2018672 ACTGAAATAAAAAAA GATATCAAAAAATAATTT TTTA AAATTATTTTACGATATC TTTTTTTTATTAGGT TERM 2170 2018711 - 2018672 - f 100 -10.4 -5.96894 | opp_overlap 2018672 ACTGAAATAAAAAAA GATATCAAAAAATAATTT TTTA AAATTATTTTACGATATC TTTTTTTTATTAGGT CD1743 2018941 - 2019648 + | two-component response regulator CD1744 2019650 - 2021008 + | two-component sensor histidine kinase CD1745 2021098 - 2021532 + | hypothetical protein TERM 2171 2021739 - 2021754 + T 76 -6.2 -4.8143 | opp_overlap 2021739 ACATAAACAAAAAAA GAGATT TTAA AATCTC TTTTTAGATTGTTGA TERM 2172 2021754 - 2021739 - T 95 -6.2 -6.04953 | opp_overlap 2021739 ACATAAACAAAAAAA GAGATT TTAA AATCTC TTTTTAGATTGTTGA TERM 2173 2021774 - 2021805 + T 100 -11.8 -3.98312 | overlap 2021775 TAGATTGTTGACTTA TGGCTTTTTGATTT AATA AAATCAAGAAGCCG TTTGAATTTTATCTG TERM 2174 2021775 - 2021804 + T 95 -13.1 -2.97903 | overlap 2021774 AGATTGTTGACTTAT GGCTTTTTGATTT AATA AAATCAAGAAGCC GTTTGAATTTTATCT TERM 2175 2022149 - 2022123 - T 100 -11.7 -4.75174 | GATTGAATTTAAAAA GCCATCAACAC ATAGA ATGTTGATGGC CTGAAAATAGATTTT CD1745A 2022411 - 2022187 - | putative ferrous iron transport protein A TERM 2176 2022524 - 2022500 - R 100 -11.7 -5.62045 | opp_overlap 2022504 ATATATAACAAAAAA TAAACATACTA AGT TAGTATGTTTA TAAAAAATAGTATAC TERM 2177 2022504 - 2022520 + r 78 -8.1 -3.87075 | opp_overlap 2022500 ATAACAAAAAATAAA CATACTA AGT TAGTATG TTTATAAAAAATAGT TERM 2178 2022550 - 2022532 - R 73 -4.6 -5.252 | TATGTTTATAAAAAA TAGTATAC ATG GGATACTA ATAGCATCTAGCAAA gltC 2023761 - 2022508 - | sodium/glutamate symporter TERM 2179 2023640 - 2023624 - G 77 -4.5 -5.19275 | ATTTAGAAAACAAAA TAATAGA CCT CCTATTA CTGGTGCAGGTATAC TERM 2180 2024861 - 2024907 + G 77 -7.9 -4.14511 | opp_overlap 2024876 ACTGATAATAGAACT GTATCAGATATAA-ATTTAAGTT CAG AACT-AAATGTTATATTTGATAC TTTTAAACTAGGATT add 2024021 - 2025010 + | adenosine deaminase TERM 2181 2025368 - 2025343 - g 71 -3.4 -5.28414 | overlap 2025346 GAAGAAAGAGAAAAA TTAGTTTTAG AAAAAG CTAAAACTTA CAAGACTACAGCAAT CD1748 2025082 - 2025822 + | hypothetical protein CD1749 2026038 - 2027189 + | putative 2-hydroxyacyl-CoA dehydratase hgdC 2027214 - 2027969 + | putative (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit TERM 2182 2028031 - 2027983 - f 74 -4.9 -5.20633 | opp_overlap 2027995, overlap 2027988 2027994 2027995 AAAAACATATAAAAA GAAAATGAGAAGCTGAATTTATT ATA AATAAATTCAGTTTTTTATTTTA TTTTATTTATTTATA TERM 2183 2028026 - 2027988 - f 77 -4.8 -5.38839 | opp_overlap 2027995, overlap 2027983 2027994 2027995 CATATAAAAAGAAAA TGAGAAGCTGAATTTATT ATA AATAAATTCAGTTTTTTA TTTTATTTTATTTAT TERM 2184 2028020 - 2027994 - f 76 -8.2 -3.79451 | opp_overlap 2027995, overlap 2027988 2027983 2027995 AAAAGAAAATGAGAA GCTGAATTTATT ATA AATAAATTCAGT TTTTTATTTTATTTT TERM 2185 2028019 - 2027995 - f 88 -11.7 -2.85231 | opp_overlap 2027995, overlap 2027994 2027988 2027983 AAAGAAAATGAGAAG CTGAATTTATT ATA AATAAATTCAG TTTTTTATTTTATTT TERM 2186 2027995 - 2028019 + F 100 -11.7 -5.95449 | opp_overlap 2027994 2027988 2027983 2027995 AAAGAAAATGAGAAG CTGAATTTATT ATA AATAAATTCAG TTTTTTATTTTATTT TERM 2187 2028201 - 2028185 - g 76 -3.7 -5.44119 | opp_overlap 2028184, overlap 2028171 TTTACTTCAAAAAAA GTAACAA GGT TTGTTGC GCTGTTTTTAATATC TERM 2188 2028361 - 2028347 - g 70 -4.4 -4.99035 | GGACGTACAGAAAAA TATAAT GGG ATTATA CCAAATCCATATCAG TERM 2189 2030408 - 2030397 - g 75 -5.8 -4.77036 | opp_overlap 2030395 2030397 2030402 CTTTAGGAGCAAAAA CTGG GTCA CCAG TAATTTTAGTTGGTG CD1751 2028161 - 2030548 + | cell surface protein (putative cell surface-associated cysteine protease) TERM 2190 2030762 - 2030709 - f 79 -3.8 -5.69068 | gap 3, overlap 2030753 TAAAAACATAAAAAA GGGTTACTT-TATATAGAAATAT-AGA AAA TCTTACATTT-TATATATAAATAACCC ATATTTAATTAACTT CD1752 2031301 - 2031891 + | TetR family transcriptional regulator TERM 2191 2031944 - 2031900 - f 100 -16.3 -3.85509 | opp_overlap 2031898, overlap 2031940 GGAATAGAATTTAAA TTTTGTTTGCTAATAACTTTT ATT AAAAATTATTAACAAACAAAA AAATTATATTTTATT CD1753 2032005 - 2032850 + | ABC transporter, ATP-binding protein TERM 2192 2033013 - 2033023 + G 75 -4 -5.24531 | overlap 2033005 ATTCTGACCCAGCAG CAAT GGG ATTG TTTTTTATGGGAGCT TERM 2193 2033460 - 2033484 + G 72 -4.5 -4.99043 | opp_overlap 2033454 2033455 2033460, overlap 2033455 TAATATCAATTATAA TAATAATTTAT TTT ATAACTTATTA TTTTATTTGTAGCAG CD1754 2032847 - 2033530 + | putative ABC transporter, permease protein CD1755 2033527 - 2034243 + | putative ABC transporter, permease protein CD1755A 2034340 - 2034603 + | putative transcriptional regulator def1 2034575 - 2035030 + | peptide deformylase 1 CD1757 2035082 - 2035543 + | hypothetical protein CD1758 2035593 - 2036495 + | radical SAM-superfamily protein TERM 2194 2036787 - 2036806 + F 100 -12.2 -6.09196 | opp_overlap 2036787 CTTTTTGAAGTTAAA CCACAGAG TAAA CTCTGTGG TTTTTTTATTTTAAA TERM 2195 2036806 - 2036787 - f 95 -12.2 -3.75153 | opp_overlap 2036787 CTTTTTGAAGTTAAA CCACAGAG TAAA CTCTGTGG TTTTTTTATTTTAAA CD1759 2036847 - 2037677 + | hypothetical protein CD1759A 2038088 - 2038222 + | hypothetical protein TERM 2196 2038298 - 2038273 - f 100 -13.5 -3.3442 | opp_overlap 2038273 2038276, overlap 2038263 2038276 TATAAGAGTACAATA TAAGGAGTACT ATAT AGTACTCCTTA CTTATACATATTAGG TERM 2197 2038273 - 2038298 + F 91 -13.5 -2.6518 | opp_overlap 2038263 2038273 2038276, overlap 2038276 TATAAGAGTACAATA TAAGGAGTACT ATAT AGTACTCCTTA CTTATACATATTAGG TERM 2198 2038276 - 2038295 + F 90 -10.8 -3.4706 | opp_overlap 2038263 2038273 2038276, overlap 2038273 AAGAGTACAATATAA GGAGTACT ATAT AGTACTCC TTACTTATACATATT TERM 2199 2038295 - 2038276 - f 91 -10.8 -3.79482 | opp_overlap 2038276 2038273, overlap 2038263 2038273 AAGAGTACAATATAA GGAGTACT ATAT AGTACTCC TTACTTATACATATT CD1760 2038727 - 2039488 + | putative iron-sulfur protein TERM 2200 2040049 - 2040032 - g 72 -8.5 -3.36128 | opp_overlap 2040035, overlap 2040027 AAATTATAAACCTAA TTACGCA CAAT TGCGTAA ATTGACAGACTGGTT CD1761 2039553 - 2040335 + | hypothetical protein CD1762 2040602 - 2041021 + | hypothetical protein TERM 2201 2041055 - 2041091 + T 86 -9.7 -4.15222 | opp_overlap 2041059, overlap 2041059 TTAATAATTGCTAGA AAAAGGTGTATAAAATT TTT AATTTTATACACCTTAA TTTATTGAAAAGAAT TERM 2202 2041059 - 2041087 + T 100 -14.9 -3.68738 | opp_overlap 2041059, overlap 2041055 TAATTGCTAGAAAAA GGTGTATAAAATT TTT AATTTTATACACC TTAATTTATTGAAAA TERM 2203 2041087 - 2041059 - T 100 -14.9 -4.8543 | opp_overlap 2041059 2041055 TAATTGCTAGAAAAA GGTGTATAAAATT TTT AATTTTATACACC TTAATTTATTGAAAA CD1763 2041390 - 2041124 - | hypothetical protein CD1764 2041602 - 2042303 + | hypothetical protein CD1765 2042385 - 2042993 + | Nudix-family hydrolase CD1766 2043317 - 2043781 + | putative lipoprotein TERM 2204 2044050 - 2044019 - f 70 -7.7 -3.3363 | opp_overlap 2044019, overlap 2044014 TTAACAATAAGCTAA TTATTATTTATAT TTTGAT ATATAAATAATAA TTGTAGCAAATTTTA TERM 2205 2044019 - 2044050 + F 70 -7.7 -3.33009 | opp_overlap 2044019 2044014 TTAACAATAAGCTAA TTATTATTTATAT TTTGAT ATATAAATAATAA TTGTAGCAAATTTTA TERM 2206 2044088 - 2044101 + F 70 -2.5 -5.4593 | opp_overlap 2044092, overlap 2044092 ATATATTTTTTGAAC TAAAT AAAA ATTTA TTTTTATTATTTTAA gapA 2044418 - 2045434 + | glyceraldehyde-3-phosphate dehydrogenase 1 TERM 2207 2045475 - 2045455 - f 73 -7.1 -4.06055 | opp_overlap 2045455 2045466, overlap 2045466 ATTTCTTAAAGCAAA TTTTAAAAA AAT TTTTTAAAA AAATTATATAAAACT TERM 2208 2045478 - 2045466 - f 73 -3.5 -5.49809 | opp_overlap 2045466, overlap 2045455 CAAATTTTAAAAAAA TTTTT TAA AAAAA TTATATAAAACTAAA TERM 2209 2045538 - 2045500 - f 90 -4.3 -6.31682 | gap 1, opp_overlap 2045500, overlap 2045537 AAAACTAAAAAAAAA GATTATGAAAAATATT GAAGGAAA AAT-TTTTTCATAATC TTTTTTCTTTCATGC TERM 2210 2045500 - 2045538 + F 82 -4.3 -5.68438 | gap 1, opp_overlap 2045500 2045537 AAAACTAAAAAAAAA GATTATGAAAAATATT GAAGGAAA AAT-TTTTTCATAATC TTTTTTCTTTCATGC CD1768 2045829 - 2046998 + | hypothetical protein TERM 2211 2047037 - 2047077 + F 100 -17.3 -5.64274 | opp_overlap 2047037 TAATATACAAAAAAA TGGTTGTTGATATGTAA TAAGAAT TTACATATCAACAACCA TTTTTTTCTGACTAA TERM 2212 2047077 - 2047037 - f 100 -17.3 -5.80248 | opp_overlap 2047037 TAATATACAAAAAAA TGGTTGTTGATATGTAA TAAGAAT TTACATATCAACAACCA TTTTTTTCTGACTAA TERM 2213 2048318 - 2048305 - g 73 -3.9 -5.29208 | AAAAGAAAAAATAAA TTATG TGGA CATAA ATTCAATAAAAAGTA TERM 2214 2051066 - 2051051 - g 71 -3.3 -5.24989 | CTAGATATCAAAAAA CCAAA AGTAGG TTTGG TTGGAGAAATATTGG CD1769 2047379 - 2051632 + | hypothetical protein TERM 2215 2051729 - 2051703 - f 100 -8.1 -5.28778 | opp_overlap 2051703 AGTATCTATAAAAAA GAGTTATCCTA TTTTT TAGGGTAACTC TTTATTAGTTAAAAA TERM 2216 2051703 - 2051729 + F 95 -10.3 -4.3255 | opp_overlap 2051703 AGTATCTATAAAAAA GAGTTATCCTA TTTTT TAGGGTAACTC TTTATTAGTTAAAAA ogt2 2051781 - 2052275 + | methylated-DNA--protein-cysteine methyltransferase 2 CD1771 2052391 - 2052768 + | hypothetical protein TERM 2217 2052811 - 2052769 - f 100 -13.9 -3.72181 | opp_overlap 2052774, overlap 2052774 AAAAAAGAATTATAA GAAAATAAGCTATCAAATA TAAAT TATTTGATAGCTTATTTTT ATAGCCGATACTAAA TERM 2218 2052774 - 2052806 + F 100 -13.8 -4.83615 | opp_overlap 2052769 2052774 AGAATTATAAGAAAA TAAGCTATCAAATA TAAAT TATTTGATAGCTTA TTTTTATAGCCGATA TERM 2219 2052806 - 2052774 - f 100 -13.8 -4.85396 | opp_overlap 2052774, overlap 2052769 AGAATTATAAGAAAA TAAGCTATCAAATA TAAAT TATTTGATAGCTTA TTTTTATAGCCGATA CD1772 2052974 - 2053414 + | hypothetical protein TERM 2220 2053588 - 2053620 + F 72 -3.6 -5.27938 | ATATTTACAGTTTAA TGGCAGTTTTAA AATAATAAA TTAAAGCTGTCA TTTTTATTTAAAAAT TERM 2221 2053831 - 2053803 - f 75 -9.1 -3.25192 | overlap 2053801 TGTAATTTGATAATA TGTAATTATAACA TTA TGATATAATTACA ATAAAGTATGTAATA CD1773 2054056 - 2055363 + | hypothetical protein TERM 2222 2055730 - 2055698 - f 100 -18.6 -3.15212 | gap 1, opp_overlap 2055688 2055698, overlap 2055688 AACCACGAGAGTTAA CTCCCGTCCTCTAGC AGAA GCTAGAGG-CGGGAG TTTTTTAATATAATT TERM 2223 2055698 - 2055730 + F 100 -18.6 -5.2422 | gap 1, opp_overlap 2055688 2055698, overlap 2055688 AACCACGAGAGTTAA CTCCCGTCCTCTAGC AGAA GCTAGAGG-CGGGAG TTTTTTAATATAATT TERM 2224 2056369 - 2056359 - g 74 -6.8 -4.20042 | opp_overlap 2056358 2056363 ATGAATAGCTTAAAA GGTG GAG CACC AGTTCTTTATGATAC CD1774 2055837 - 2056640 + | amino acid ABC transporter, substrate-binding protein CD1775 2056678 - 2057289 + | amino acid ABC transporter, permease protein CD1776 2057321 - 2057992 + | amino acid ABC transporter, ATP-binding protein CD1777 2058291 - 2058653 + | putative arsenate reductase TERM 2225 2058661 - 2058697 + F 85 -11.2 -2.76059 | opp_overlap 2058659 2058661, overlap 2058658 AAGATTAGGAAGAGA TAGGTGTGTTGATTAA AATTA TTAATTAATACACCTA TAAATTTATGTATTA TERM 2226 2059318 - 2059331 + G 76 -3.9 -5.46698 | opp_overlap 2059318 2059328, overlap 2059328 CAAAATATAATGAAA TTGAT GTAA ATCAA TTTTTTGATTTTAGG TERM 2227 2059759 - 2059773 + G 72 -4.2 -5.16237 | opp_overlap 2059759 AGGATGTATTAAAAC GCTCTA CAA TAGTGC TTTTTTGGTGGGATT CD1778 2059089 - 2059790 + | hypothetical protein CD1779 2060076 - 2060879 + | hypothetical protein CD1780 2060934 - 2062082 + | putative methylase TERM 2228 2062850 - 2062866 + G 81 -8.1 -4.25283 | opp_overlap 2062849 AAGACTAATGAAATG TTTGCAA GTG TTGCAAA TTTTGATGGGAAAAT CD1781 2062226 - 2063614 + | putative lipoprotein CD1782 2063607 - 2064341 + | two-component response regulator CD1783 2064344 - 2065777 + | two-component sensor histidine kinase truA2 2065799 - 2066536 + | tRNA pseudouridine synthase A TERM 2229 2066845 - 2066869 + F 100 -12.2 -5.28755 | AACGCGGATATATTT CGTCTCTTGG TTTTT CCAAGAGGCG TTTTTTAATATATTT TERM 2230 2066970 - 2066997 + F 100 -12.2 -5.63374 | ACCGCGGATATTTCG CCTCTTAGTATT TTAA AATACTAAGGGG TTTTTTTAGTATTAA argG 2067107 - 2068306 + | argininosuccinate synthase TERM 2231 2068324 - 2068360 + F 90 -6.2 -5.96894 | gap 1 AAATAAATTATTTAA GAGTGTATAAAAAC-TA TTTT TAGGTTTTTATATGCTC TTTTTTTATTTGAAT CD1786 2068553 - 2069599 + | hypothetical protein CD1787 2069707 - 2070870 + | MerR family transcriptional regulator TERM 2232 2070916 - 2070948 + T 79 -8.7 -3.72051 | opp_overlap 2070916, overlap 2070919 ATAAAAGCACAAAAA TAAGGATGTAGAT TAGCTCC ATCTATATCCTTA TTTAAAGTTATTAAA TERM 2233 2070948 - 2070916 - T 83 -6.5 -5.10601 | opp_overlap 2070916 2070919 ATAAAAGCACAAAAA TAAGGATGTAGAT TAGCTCC ATCTATATCCTTA TTTAAAGTTATTAAA CD1788 2071339 - 2070959 - | hypothetical protein CD1789 2072001 - 2071342 - | hypothetical protein TERM 2234 2072112 - 2072083 - R 100 -11.7 -5.42265 | opp_overlap 2072083 TCAAAGTATAAAAAA CCTTAAATAATTG GATT CAACTATTTAAGG TTTTTTTGATAATTT TERM 2235 2072083 - 2072112 + r 100 -9.5 -5.5943 | opp_overlap 2072083 TCAAAGTATAAAAAA CCTTAAATAATTG GATT CAACTATTTAAGG TTTTTTTGATAATTT CD1790 2073096 - 2072107 - | putative exonuclease CD1791 2073468 - 2073121 - | hypothetical protein TERM 2236 2073480 - 2073496 + r 77 -6.6 -4.65819 | GCAATATTAGTACCT GCTACT TACAT AGTAGC TTTTCCTTTCCTTTT CD1792 2074642 - 2073686 - | putative L-threonine dehydrogenase CD1793 2075085 - 2075453 + | hypothetical protein TERM 2237 2075464 - 2075492 + F 86 -5.5 -5.70829 | opp_overlap 2075464 AATAATTCTAAGAAA CAAGTATTTTA CATTCGA TAGAATACTTG TTTTTTTATGATATT CD1794 2075878 - 2076123 + | hypothetical protein CD1795 2076222 - 2076485 + | hypothetical protein CD1796 2077708 - 2076761 - | putative nitrite and sulfite reductase subunit TERM 2238 2077653 - 2077669 + g 78 -6.6 -4.56636 | TCTCCATCCCTGCTT GGTAGA AAACC TCTACC TTTTACTTCCTTTTT CD1797 2079342 - 2077711 - | putative pyridine nucleotide-disulfide oxidoreductase CD1798 2079472 - 2080389 + | LysR family transcriptional regulator TERM 2239 2080445 - 2080390 - T 100 -25.6 -3.38218 | opp_overlap 2080392 2080394 2080406, overlap 2080406 GTAAACAGTTTATAA TATATCTAAATAAAAATAAGAGTATA TCAA TATACTCTTATTTTTATTTAGATATA TTAGCCTATATTAAC TERM 2240 2080392 - 2080443 + T 100 -23.8 -3.09648 | opp_overlap 2080390 2080406, overlap 2080394 2080406 AAACAGTTTATAATA TATCTAAATAAAAATAAGAGTATA TCAA TATACTCTTATTTTTATTTAGATA TATTAGCCTATATTA TERM 2241 2080394 - 2080441 + T 100 -22 -3.10053 | opp_overlap 2080390 2080406, overlap 2080392 2080406 ACAGTTTATAATATA TCTAAATAAAAATAAGAGTATA TCAA TATACTCTTATTTTTATTTAGA TATATTAGCCTATAT TERM 2242 2080406 - 2080429 + T 100 -9.8 -5.31519 | opp_overlap 2080390 2080406, overlap 2080394 2080392 ATATCTAAATAAAAA TAAGAGTATA TCAA TATACTCTTA TTTTTATTTAGATAT TERM 2243 2080429 - 2080406 - T 100 -9.8 -5.31519 | opp_overlap 2080406 2080394 2080392, overlap 2080390 ATATCTAAATAAAAA TAAGAGTATA TCAA TATACTCTTA TTTTTATTTAGATAT CD1799 2081027 - 2080446 - | tellurium resistance protein CD1800 2081633 - 2081067 - | tellurium resistance protein TERM 2244 2081998 - 2082056 + r 100 -14.6 -4.73297 | gap 1, opp_overlap 2081998 ATTATAATATATAAA TAGCAAGTATAATATAACATATAAAAA GTTGAA TTTGTATATGTTA-ATTATACTTGCTA TTTATTTGTTAGTTA TERM 2245 2082056 - 2081998 - R 100 -14.6 -4.25389 | gap 1, opp_overlap 2081998 ATTATAATATATAAA TAGCAAGTATAATATAACATATAAAAA GTTGAA TTTGTATATGTTA-ATTATACTTGCTA TTTATTTGTTAGTTA CD1801 2082932 - 2082069 - | hypothetical protein CD1802 2083078 - 2083968 + | putative hydrolase CD1803 2084186 - 2085940 + | cell surface protein TERM 2246 2086054 - 2086084 + F 100 -12.1 -5.1523 | opp_overlap 2086057 TTAAGTGTTTATCGA TAAGGCTATGGTT GTAAA AATCATAGCCTTA TTTTTATATTATAAA TERM 2247 2086354 - 2086334 - g 78 -3.4 -5.54894 | AACCTATGAAAAAAA TAACAATA AATGA TATTGCTA ACTTGGCAGGAGTAT scrR 2086324 - 2087310 + | sucrose operon repressor TERM 2248 2087340 - 2087313 - f 72 -8 -3.55551 | gap 1, opp_overlap 2087313, overlap 2087311 AAATAAAAATTAAGA TACACATTACATA TAT TA-GTAATGTGTA TTTTTTTACTAAAAA TERM 2249 2087313 - 2087340 + F 100 -8 -5.52384 | gap 1, opp_overlap 2087313 2087311 AAATAAAAATTAAGA TACACATTACATA TAT TA-GTAATGTGTA TTTTTTTACTAAAAA TERM 2250 2087452 - 2087437 - f 81 -9 -3.91798 | opp_overlap 2087437, overlap 2087449 2087450 TAATCTTTAATTAAA CCGGTT TCGA AACCGG TTTAATTAAACCGAT TERM 2251 2087437 - 2087452 + F 81 -9 -3.90291 | opp_overlap 2087437 2087449 2087450 TAATCTTTAATTAAA CCGGTT TCGA AACCGG TTTAATTAAACCGAT TERM 2252 2088790 - 2088777 - g 76 -3.9 -5.49569 | TATTAATATAAAAAA TATTG ACAG CAATA AATTTGGGCTGGAAT sacA 2087647 - 2089128 + | putative sucrose-6-phosphate hydrolase scrK 2089154 - 2090125 + | putative fructokinase TERM 2253 2090200 - 2090236 + T 78 -9.7 -2.94045 | gap 1, opp_overlap 2090200 2090204, overlap 2090204 CTATGAAAATAGCAA TAAAGAGGC-TGTCTC AAAATA GAGATAAGCCTCTTTA TAATTGTTGAAATGA TERM 2254 2090236 - 2090200 - T 72 -7.5 -3.55966 | gap 1, opp_overlap 2090200 2090204, overlap 2090204 CTATGAAAATAGCAA TAAAGAGGC-TGTCTC AAAATA GAGATAAGCCTCTTTA TAATTGTTGAAATGA CD1807 2090968 - 2090366 - | putative NADPH-dependent FMN reductase TERM 2255 2091816 - 2091832 + G 80 -2.3 -5.68039 | overlap 2091821 TTTGAAAAGTTAGGA CATTATT ATG AAAAATG TTTTTTTATAGCTTT CD1808 2091249 - 2092460 + | putative pyridoxal-dependent decarboxylase CD1810 2093917 - 2094294 + | putative regulatory protein TERM 2256 2094917 - 2094901 - g 70 -8.7 -2.66316 | overlap 2094898 TTTTTGATTATACTA GTCAGTC AAA GACCGAC TTAAAAAAACTAAAT CD1811 2094825 - 2095484 + | putative two-component sensor histidine kinase (partial) CD1812 2095721 - 2096119 + | putative two-component system response regulator (partial) TERM 2257 2096152 - 2096122 - f 85 -9.8 -3.26531 | opp_overlap 2096126, overlap 2096120 TTATGAAGATTAATA TTGAGAGGCTGTAT TTT ATACAGCCTCTTTA TTTATTGATTGTATT TERM 2258 2096126 - 2096148 + F 100 -15 -4.73297 | opp_overlap 2096122 2096120 GAAGATTAATATTGA GAGGCTGTAT TTT ATACAGCCTC TTTATTTATTGATTG CD1813 2096270 - 2096683 + | hypothetical protein CD1814 2096885 - 2097526 + | putative phosphoglycerate mutase CD1815 2097550 - 2098803 + | hypothetical protein cmk 2098849 - 2099499 + | cytidylate kinase CD1817 2099550 - 2100146 + | putative acyltransferase ispH 2100159 - 2100998 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 2259 2101055 - 2101017 - f 78 -5.4 -5.12068 | opp_overlap 2101019, overlap 2101019 GATAGGTAATAAAAA TAGGTGGACATTGTTATA ATT TATCATAATATCCACCTT TGATTTCATATTACA TERM 2260 2101019 - 2101053 + F 77 -8 -4.14345 | opp_overlap 2101017 2101019 TAGGTAATAAAAATA GGTGGACATTGTTATA ATT TATCATAATATCCACC TTTGATTTCATATTA TERM 2261 2101053 - 2101019 - f 77 -8 -4.17914 | opp_overlap 2101019, overlap 2101017 TAGGTAATAAAAATA GGTGGACATTGTTATA ATT TATCATAATATCCACC TTTGATTTCATATTA TERM 2262 2101191 - 2101171 - f 73 -5.6 -4.74598 | GAAATTCAAAAGAAA TATTGATA TTGAT TATCAATA GAAAATAGAATATAA TERM 2263 2101260 - 2101275 + G 80 -6.8 -4.71061 | overlap 2101259 GGAAATGTTGATATC CGCTTC TGAA GAGGCG TTTTTACATGTAGGT CD1819 2101243 - 2102397 + | hypothetical protein TERM 2264 2102499 - 2102489 - f 83 -4 -5.98675 | opp_overlap 2102489 TATAAAAATAAAAAA TTCA ATA TGAA TTAAATTATTGCTTA TERM 2265 2102524 - 2102559 + F 90 -10.6 -3.34468 | opp_overlap 2102524 2102523 2102526, overlap 2102520 TGCTTAAATATTAAT GAGAACATGGGAGATA ATAT TATTCCTCATGTTCTC TCTATTTAATTAAAG TERM 2266 2102981 - 2102967 - gf 72 -8.6 -3.01912 | opp_overlap 2102958, overlap 2102951 CTATATGTAGAGATA GGATAG AAC CTATCC AATACTACTTGAATT TERM 2267 2103812 - 2103801 - g 74 -3 -5.38951 | AATGCATATAAAAAA TTCT TTAA AGAA AAGGCAGGATTTCCT TERM 2268 2104149 - 2104133 - g 73 -5.9 -4.58076 | AGAATTTATAGAAAA TCCTAAG TAT CTTAAGA AGTCATTAAACAAAC tlpB 2103561 - 2104646 + | transposase-like protein B TERM 2269 2104673 - 2104659 - gf 90 -10 -3.69283 | TAACTTATGTAAGAA CCGTAG GAA CTACGG GGATAGCCTGTGGAG TERM 2270 2106173 - 2106163 - gf 79 -5.4 -5.17744 | AGATAGCAAGAAAAA TGGA AGT TCCA GAGTATGTAGACCCT ade 2102703 - 2106284 + | adenine deaminase TERM 2271 2106308 - 2106336 + F 77 -4.7 -5.29445 | gap 1, opp_overlap 2106307 2106325 AAAGTAATAATAAAT GAGGCTT-TCTC AAAATA GAGATAAGTCTC TTTTTATTGTTGAAA bcp 2106636 - 2107100 + | putative thiol peroxidase (bacterioferritin comigratory protein) CD1823 2107110 - 2107853 + | hypothetical protein TERM 2272 2107992 - 2107968 - f 70 -7.9 -3.40203 | TAAAAAAAGAAAGGA GTGGTCTTCCA AAA TGGAAAATCAC AAACAGATGCCTTGG CD1824 2107981 - 2110638 + | putative cations-transporting ATPase TERM 2273 2110813 - 2110833 + F 100 -11.2 -4.8743 | opp_overlap 2110813 TTAAGCTTATACAGA GCCTGAGT TATAT ACTCAGGC TTTATTTATTTTAAC TERM 2274 2110833 - 2110813 - f 87 -11.2 -3.00994 | opp_overlap 2110813 TTAAGCTTATACAGA GCCTGAGT TATAT ACTCAGGC TTTATTTATTTTAAC cysD 2110904 - 2112169 + | putative O-acetylhomoserine sulfhydrylase metA 2112199 - 2113089 + | homoserine O-succinyltransferase TERM 2275 2113520 - 2113465 - f 100 -17.6 -3.42354 | opp_overlap 2113465 2113469, overlap 2113450 2113469 TATTGTAATTGACAA TAAATACTTAATACTATAATATTTAA TACA TTAAACATTATAGTGTTAAGTATTTA TTTACAGTATGCACT TERM 2276 2113465 - 2113520 + F 100 -17.6 -3.63805 | opp_overlap 2113450 2113465 2113469, overlap 2113469 TATTGTAATTGACAA TAAATACTTAATACTATAATATTTAA TACA TTAAACATTATAGTGTTAAGTATTTA TTTACAGTATGCACT TERM 2277 2113516 - 2113469 - f 100 -14 -4.35604 | opp_overlap 2113469 2113465, overlap 2113465 GTAATTGACAATAAA TACTTAATACTATAATATTTAA TACA TTAAACATTATAGTGTTAAGTA TTTATTTACAGTATG TERM 2278 2113469 - 2113516 + F 100 -14 -4.45117 | opp_overlap 2113465 2113469, overlap 2113465 GTAATTGACAATAAA TACTTAATACTATAATATTTAA TACA TTAAACATTATAGTGTTAAGTA TTTATTTACAGTATG CD1827 2113580 - 2114023 + | MarR family transcriptional regulator ftsH1 2114054 - 2115871 + | cell division protein TERM 2279 2115918 - 2115887 - f 91 -10.4 -3.63018 | opp_overlap 2115889 2115895, overlap 2115889 2115895 AATGATTATACACAA GATAAAAATGCCTA TTGT TAGGCATTTTTATT TTACAACTAAATTTT TERM 2280 2115889 - 2115916 + F 100 -13 -4.1196 | opp_overlap 2115889 2115887 2115895, overlap 2115895 TGATTATACACAAGA TAAAAATGCCTA TTGT TAGGCATTTTTA TTTTACAACTAAATT TERM 2281 2115916 - 2115889 - f 95 -13 -3.38656 | opp_overlap 2115889 2115895, overlap 2115887 2115895 TGATTATACACAAGA TAAAAATGCCTA TTGT TAGGCATTTTTA TTTTACAACTAAATT TERM 2282 2115895 - 2115910 + F 100 -7.6 -5.45802 | opp_overlap 2115895 2115889 2115887, overlap 2115889 TACACAAGATAAAAA TGCCTA TTGT TAGGCA TTTTTATTTTACAAC TERM 2283 2115910 - 2115895 - f 93 -7.6 -5.1764 | opp_overlap 2115889 2115895, overlap 2115889 2115887 TACACAAGATAAAAA TGCCTA TTGT TAGGCA TTTTTATTTTACAAC TERM 2284 2116149 - 2116167 + G 73 -8.9 -3.09785 | overlap 2116151 TTGGTTATGCAGCTG GAGTAGG AAAAA CCTACTC TATGTTGGAATCTGC TERM 2285 2116502 - 2116484 - g 76 -9 -3.47617 | overlap 2116470 ACTGTAAATGTACAA CATTTAGA AAG TCTAAATG ACATTGTTGAGATAA kdpD 2116049 - 2118751 + | two-component sensor histidine kinase kdpE 2118785 - 2119483 + | two-component response regulator TERM 2286 2120738 - 2120752 + G 70 -3.6 -5.10208 | CAGCAACTTTATTTT TTATGC TAT GTATAA TTTTTGTTGGAATTA CD1831 2119819 - 2120796 + | putative cation transport-related, membrane protein CD1831A 2120973 - 2121128 + | hypothetical protein TERM 2287 2121191 - 2121212 + F 100 -11.7 -5.80951 | opp_overlap 2121196 TGATAGATTATTTTA GAGAACTCA TTAG TGAGTTCTC TTTTTTATTTTAAAT TERM 2288 2121738 - 2121727 - g 83 -2.2 -5.85244 | AAGCAAAAGAAAAAA CAGG GCTT CCTA TAGTTACAGAAATAA CD1832 2121258 - 2122271 + | 3-deoxy-7-phosphoheptulonate synthase aroB 2122293 - 2123357 + | 3-dehydroquinate synthase TERM 2289 2123477 - 2123487 + G 70 -4 -4.93898 | opp_overlap 2123470 GGAAAAAGTAGAATT TCTA ATA TAGA TTTTTCTGATGATAT aroA 2123357 - 2124670 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroC 2124648 - 2125727 + | chorismate synthase TERM 2290 2126264 - 2126245 - g 74 -5 -4.88895 | AAATAAAGAAATAAA CTATGGAA TAAT CCCCATAG AAAATTCATCTACAG pheA 2125730 - 2126926 + | P-protein aroE 2126973 - 2127782 + | shikimate dehydrogenase aroK 2127794 - 2128327 + | shikimate kinase TERM 2291 2128603 - 2128590 - g 76 -3.9 -5.40014 | overlap 2128584 AAATAATAATAAAAA CTTTT TTAA AAAAG GGACTATAATTACTG tyrC 2128348 - 2129187 + | putative prephenate dehydrogenase TERM 2292 2130460 - 2130470 + G 78 -4 -5.40072 | ATATCTGTAAACTTC TCAA GAG TTGA TTTTTTTAAAAAAGA CD1840 2129428 - 2130936 + | putative signaling protein TERM 2293 2133526 - 2133504 - g 71 -4.8 -4.71222 | opp_overlap 2133504, overlap 2133505 AGATTAAAATTAAAA GCTGAAAGAG ATA CTCTTACAGG ATTATATAATAAAGG TERM 2294 2133525 - 2133505 - g 73 -8.3 -3.41107 | opp_overlap 2133504, overlap 2133504 GATTAAAATTAAAAG CTGAAAGAG ATA CTCTTACAG GATTATATAATAAAG CD1841 2130969 - 2134406 + | putative signaling protein CD1843 2135427 - 2135119 - | hypothetical protein CD1842 2134424 - 2135170 + | hypothetical protein TERM 2295 2135176 - 2135211 + gF 80 -9.3 -3.18536 | opp_overlap 2135181, overlap 2135181 TGATAGATAATAAAT AAAAAGACTAGATAT AAACTC ATATCTAGTCTTTTC TATTCCCTTAATTCT TERM 2296 2135181 - 2135206 + gF 100 -9.2 -4.7033 | opp_overlap 2135181, overlap 2135176 GATAATAAATAAAAA GACTAGATAT AAACTC ATATCTAGTC TTTTCTATTCCCTTA TERM 2297 2135206 - 2135181 - Gf 100 -9.9 -5.50774 | opp_overlap 2135181 2135176 GATAATAAATAAAAA GACTAGATATA AACT CATATCTAGTC TTTTCTATTCCCTTA TERM 2298 2135716 - 2135703 - fH 70 -2.5 -5.48825 | TATCACCGAAAAAAA TTAAA CCCA TTTAA AAAGCAATATAAAAG TERM 2299 2135936 - 2135919 - fH 80 -2.7 -6.04419 | AAAATAACAAAAAAA TCACTGA CATT TCACTGA CAAATTGTAATTTTG TERM 2300 2135984 - 2136024 + FH 71 -6.4 -4.07437 | opp_overlap 2135991, overlap 2135991 AAAATACTTGATTAT TGAAAAATGGCATAAAAT AATAC ATTTTATGCCATTTACTA TTATTTGATAGTTTT TERM 2301 2136017 - 2135991 - fH 100 -11.8 -4.68593 | opp_overlap 2135984 2135991 TTGATTATTGAAAAA TGGCATAAAATA ATA CATTTTATGCCA TTTACTATTATTTGA TERM 2302 2135991 - 2136017 + FH 100 -11.1 -4.04415 | opp_overlap 2135991, overlap 2135984 TTGATTATTGAAAAA TGGCATAAAAT AATAC ATTTTATGCCA TTTACTATTATTTGA CD1844A 2137462 - 2137770 + | putative RNA methyltransferase (partial) CD1845 2137789 - 2138070 + | putative membrane protein (partial) CD1846 2138111 - 2138629 + | hypothetical protein TERM 2303 2138674 - 2138694 + F 100 -7.6 -5.27335 | opp_overlap 2138674 AAATGGGTTATCAAA GGCGATAG AAAAA CTATCGTC TTTTTATTTGAAAAA TERM 2304 2138781 - 2138770 - g 70 -4.4 -4.87803 | TAGTCGCAAATAAAA CTCT TGCA AGAG AATTAGGATTAAACG TERM 2305 2138970 - 2138950 - g 71 -5.5 -4.51891 | overlap 2138947 ATACAGTAAAAAGAA CTTTTTCAA AGT TAGAAAAAG CAGGTTATCTTTTAG TERM 2306 2139197 - 2139171 - g 73 -8.8 -3.19038 | overlap 2139163 2139176 2139179 GGCAAAATCAGCCAA TGCAATAATGCA GAT TGCACTAATGCA CAGGTTCAAAATGCA CD1847 2138730 - 2139740 + | putative conjugative transposon protein CD1848 2139742 - 2140227 + | putative conjugative transposon protein TERM 2307 2140267 - 2140313 + G 72 -4 -5.10064 | gap 2 AAGGCTTATTTAAGG TGCAAGATAAGGCAAAGTTTCT AAAGC AGA-ACATTCCC-TATCTTGCA TTTTTCTATGTTGGC TERM 2308 2141240 - 2141258 + G 74 -7.4 -3.92324 | overlap 2141235 TATTCTTATCTCTTG TGGTGCAA GGC TTGCTCCA TTTGATATTAGGGAA CD1849 2140266 - 2142005 + | putative conjugal transfer protein CD1850 2142169 - 2143035 + | AraC family transcription regulator TERM 2309 2143285 - 2143270 - g 71 -7.6 -3.40565 | opp_overlap 2143279 AATGATTAATATTAA TGCCAA CTTG TTGGCA GAACCGACTTTCTCA TERM 2310 2143344 - 2143325 - g 70 -4.4 -4.92363 | gap 1, opp_overlap 2143325 AAAGAGGGAGAAAAA GTGGAAGTT GCA AACTTC-AC GCTTGTAAAAAAGTA TERM 2311 2143435 - 2143421 - g 89 -8.6 -4.55826 | opp_overlap 2143420 GCGAAAACAGTAAAA GCCTTT GAA AAAGGC GATTTGATCCATATC CD1851 2143244 - 2143555 + | putative conjugal transfer protein (putative single-stranded DNA binding protein) CD1852 2143559 - 2143774 + | putative conjugative transposon membrane protein CD1853 2143794 - 2144657 + | putative conjugative transposon membrane protein CD1854 2144675 - 2144935 + | putative conjugative transposon membrane exported protein CD1855 2144939 - 2145328 + | putative conjugative transposon membrane protein TERM 2312 2146719 - 2146708 - gf 73 -5.8 -4.55887 | opp_overlap 2146708 GTGCAAAAAGAGAAA TGGC AAAT GCCA TTCTTACAACCGATG CD1856 2145240 - 2147669 + | putative conjugal transfer protein TERM 2313 2148779 - 2148802 + G 72 -6.1 -4.20868 | TAAGAAAAACGAAGG GACTTATGA TTATTT TCATAGGTC TTATTCTTTTGAGAA TERM 2314 2149528 - 2149550 + G 74 -8.4 -3.69088 | opp_overlap 2149528 2149527 GTTTTTGGTGCAAAT GGGCCGTCAA ATT TTGACTGCTC TTCATTTGTGTGTTG CD1857 2147674 - 2149836 + | putative conjugative transposon cell wall hydrolase CD1857A 2149848 - 2150081 + | hypothetical protein TERM 2315 2150482 - 2150468 - g 72 -6.4 -4.33927 | AAACAGAAAATGAAA GCTCAA AAT CTGAGC AAAGCTCTCAATCAA CD1858 2150071 - 2151642 + | putative cell surface protein TERM 2316 2151681 - 2151710 + F 76 -8.6 -3.65812 | opp_overlap 2151679 2151681 2151683, overlap 2151683 ATTTGGGGCAAAACA CAGGGCGAGAGA GTAAAA TCTTTCGCCCTC TTATATTGAAAACAG TERM 2317 2151683 - 2151708 + F 93 -11.2 -3.41024 | opp_overlap 2151681 2151679 2151683, overlap 2151681 TTGGGGCAAAACACA GGGCGAGAGA GTAAAA TCTTTCGCCC TCTTATATTGAAAAC TERM 2318 2151708 - 2151683 - f 77 -9 -3.39908 | opp_overlap 2151683 2151681, overlap 2151681 2151679 TTGGGGCAAAACACA GGGCGAGAGA GTAAAA TCTTTCGCCC TCTTATATTGAAAAC CD1859 2151738 - 2153444 + | conjugative transposon DNA topoisomerase CD1859A 2153528 - 2153713 + | putative conjugative transposon regulatory protein TERM 2319 2154077 - 2154059 - g 100 -11.8 -4.81734 | opp_overlap 2154057 2154062 AAAGATGATGAAAAA GTGTCAAC GCT GTTGACAC AATTGAGTTGGTCTA TERM 2320 2154351 - 2154337 - g 71 -7.2 -3.76413 | overlap 2154344 TCCTAAAATTGGAAA TGAAAG AGA CTTTCA GAAGTCAATTCTTGA CD1860 2153747 - 2154793 + | hypothetical protein CD1861 2154904 - 2155710 + | conjugative transposon O-methyltransferase TERM 2321 2155768 - 2155792 + F 79 -3.6 -5.72622 | TATATAGAATCAAAA GGTGGTTAGA GAAAA TCTAATTGCC TTTTTTATTTGTAAA TERM 2322 2155895 - 2155868 - g 71 -8.6 -2.78508 | opp_overlap 2155872, overlap 2155865 GAGCTTGTAAAACAG GATATTCTGC AAAGTGAA GCAGAATATC TGAAGCTCTTAAAGG TERM 2323 2157038 - 2157054 + G 70 -4.4 -4.88407 | GATAAAGAGATAAGG GAAGCT GATAA GGCTTC TTTTTCCTTGCCTGA TERM 2324 2157989 - 2158001 + G 72 -4.1 -5.10461 | AAATTACAGAAGAAT CATTG TAA CGATG TTTTTCTTACATGGC TERM 2325 2159966 - 2159977 + G 70 -5.8 -4.22375 | AAGGTTCGTAACGGC GGTG TTAT CACC TTTATTACATCATCT CD1862 2155769 - 2164804 + | putative conjugative transposon DNA recombination protein TERM 2326 2164806 - 2164821 + F 71 -6.8 -4.13767 | opp_overlap 2164806 AAATTTTAAGATAAG GGGAGG GCAA CCTCTC TTTTGCCATGAAAGG CD1863 2164829 - 2165506 + | hypothetical protein TERM 2327 2165513 - 2165543 + F 100 -8.3 -5.72622 | gap 1, overlap 2165514 GAGAGATAAATTTAC G-GTCGGTGTGGTC TTAG GACTGCACCGGCTC TTTTTTATTTATGCA TERM 2328 2165514 - 2165541 + F 100 -12 -4.49311 | overlap 2165513 AGAGATAAATTTACG GTCGGTGTGGTC TTAG GACTGCACCGGC TCTTTTTTATTTATG CD1864 2165646 - 2165876 + | putative conjugative transposon egulatory protein CD1865 2166079 - 2167701 + | putative conjugative transposon DNA recombination protein CD1866 2167698 - 2168765 + | hypothetical protein TERM 2329 2169121 - 2169107 - g 80 -6.4 -4.91573 | overlap 2169112 2169117 AAAAGAGATTAAAAA GGAAGC AGA ACTTCC GATAGGAAGAAAAAC CD1867 2168793 - 2169254 + | hypothetical protein CD1868 2169244 - 2170050 + | hypothetical protein CD1869 2171417 - 2170086 - | putative conjugative transposon mobilization protein TERM 2330 2170168 - 2170191 + g 95 -6.1 -5.80364 | opp_overlap 2170168 GTAGATTTTGTAGAA GAATACTCT TGCATT AGGGTATTC TTTTTTTCTTGCAAT CD1870 2171773 - 2171423 - | putative conjugative transposon mobilization protein TERM 2331 2171870 - 2171846 - H 73 -2.2 -5.68039 | gap 2, opp_overlap 2171854, overlap 2171854 AAATTGATAAAAAAA GAAGCATATCCC AGA GGG-C-TGCTTC ATCAATTTTTTCGTA TERM 2332 2171883 - 2171902 + H 78 -9.4 -2.94962 | overlap 2171887 2171893 TTCATCAATTTTTTC GTAAGTGT CCGT ACACTTAC TGTGCTTGCTCATAT CD1871 2172097 - 2173254 + | hypothetical protein CD1871A 2173276 - 2173428 + | hypothetical protein CD1872 2173415 - 2174311 + | putative iron-sulfur-binding membrane protein vexP1 2174330 - 2175607 + | ABC transporter, permease protein vexP2 2175617 - 2176273 + | ABC transporter, ATP-binding protein TERM 2333 2176666 - 2176652 - g 77 -7.2 -4.22535 | AGAATTTTAAAAGAA CAGTTA TGT TAACTG GGGTTAACGACTCAT vexP3 2176273 - 2177649 + | ABC transporter, permease protein TERM 2334 2177682 - 2177647 - f 85 -11.4 -2.90403 | opp_overlap 2177652 2177670 2177671, overlap 2177652 TTAATTGACAATAAT TAAAATTTTCGGTGCT TTTT AGCACCAAAAATTTTT TGGCTTTTAAATATC TERM 2335 2177652 - 2177677 + F 100 -9.1 -5.2696 | opp_overlap 2177652 2177647, overlap 2177670 2177671 TGACAATAATTAAAA TTTTCGGTGCT TTTT AGCACCAAAAA TTTTTTGGCTTTTAA TERM 2336 2177677 - 2177652 - f 100 -11.3 -4.59414 | opp_overlap 2177652 2177670 2177671, overlap 2177647 TGACAATAATTAAAA TTTTCGGTGCT TTTT AGCACCAAAAA TTTTTTGGCTTTTAA vncR 2177747 - 2178400 + | two-component system, response regulator TERM 2337 2178775 - 2178761 - g 76 -3.6 -5.44721 | opp_overlap 2178761 ATGATGGTAAAAAAA CAAATC TAC AATTTG TTTCTACAGCTGATA TERM 2338 2179260 - 2179248 - g 76 -3.5 -5.46657 | opp_overlap 2179248 TAGTTTAACAAAAAA TATTT CTC AAATA TTATCAGTTCATTCT vncS 2178397 - 2179716 + | two-component system, sensor histidine kinase TERM 2339 2180342 - 2180371 + G 90 -7.2 -5.43866 | CACGAGAAGTATTTA GAGCAGGTGG ACAGGAAAAA CCACTTGCTC TTTTTTTCAGCATTG CD1878 2180240 - 2180650 + | hypothetical protein TERM 2340 2180667 - 2180653 - f 73 -6.4 -4.24123 | CGAAGAACTTTAAAA CTTCGG TAA CCAAAG GGGGCAAATTTTCCT TERM 2341 2180907 - 2180893 - f 70 -7.8 -3.33151 | overlap 2180894 CGGTTCAAATGAATA CCGGCA TAA TGCCGA GGTTAGAAGAAAATG TERM 2342 2180906 - 2180894 - f 72 -9.1 -2.59569 | overlap 2180893 GGTTCAAATGAATAC CGGCA TAA TGCCG AGGTTAGAAGAAAAT CD1878b 2181139 - 2181291 + | hypothetical protein TERM 2343 2181426 - 2181413 - f 75 -3.9 -5.58051 | opp_overlap 2181419 AAAGAAAAAATAAAA GTATA TCTC TATAC AAGAGTATCTACATC TERM 2344 2183580 - 2183558 - f 70 -7.8 -3.46387 | overlap 2183554 2183556 ATTATAACAAATACA GCTGTAGT ATCTTCA ACTACAGC AGACCCAAACCTTAA TERM 2345 2183678 - 2183658 - f 72 -6.1 -4.45544 | opp_overlap 2183660 TTTTAGTAATGAAAA CAGCAGAAC CTA ATTCAGCTG TTCCAGGTACTTTAT TERM 2346 2186088 - 2186136 + F 73 -4.3 -5.24531 | opp_overlap 2186123, overlap 2186078 GTCCTTTTTAATTCA TTAAAATTATTTATTCTAATTAA ATT TTAAATGTATTAAATAATTTTAA TTTTTTATAAAAAAT TERM 2347 2186303 - 2186293 - f 72 -4 -5.2853 | opp_overlap 2186288 2186293, overlap 2186288 TATTTAAAAATAAAA GAAT TTT ATTC CTATTGTGTAAAGTG TERM 2348 2186474 - 2186457 - g 73 -5.6 -4.60487 | CAGCAGTTCCAAAAA TACCAG TATTTG CTGGTA ACGATATAACTTCAG CD1880 2186387 - 2186734 + | hypothetical protein TERM 2349 2186732 - 2186766 + T 76 -5.9 -4.84311 | opp_overlap 2186732 2186734 2186743 GCAGAATACAGAGGA TAGATATATAAGTAC AGTTA GTACTTTAATATCTA TTTTATTATATAAAC TERM 2350 2186794 - 2186827 + T 100 -13.5 -5.28166 | opp_overlap 2186794 2186802, overlap 2186802 AACTTTAATCTCAAA TATAAAAAGAGTCTT TTAA AAGGCTCTTTTTATA TTTTTGTTAATTTTC TERM 2351 2186827 - 2186794 - T 95 -11.3 -3.66921 | opp_overlap 2186794 2186802, overlap 2186802 AACTTTAATCTCAAA TATAAAAAGAGTCTT TTAA AAGGCTCTTTTTATA TTTTTGTTAATTTTC TERM 2352 2186802 - 2186819 + T 83 -6.3 -5.38398 | opp_overlap 2186802 2186794, overlap 2186794 TCTCAAATATAAAAA GAGTCTT TTAA AAGGCTC TTTTTATATTTTTGT TERM 2353 2186819 - 2186802 - T 70 -4.1 -5.19879 | opp_overlap 2186794 2186802, overlap 2186794 TCTCAAATATAAAAA GAGTCTT TTAA AAGGCTC TTTTTATATTTTTGT CD1882 2188916 - 2187411 - | site-specific recombinase TERM 2354 2189016 - 2188980 - R 83 -6.1 -5.28983 | opp_overlap 2188980 TTTAAAACACAAAAA TAAACCTTCAAAATACA ATA TATATTTTTTAGGTTTA TTTTAATACAGTAAA CD1883 2189970 - 2189116 - | AraC family transcription regulator TERM 2355 2190492 - 2190461 - g 73 -8.2 -3.44608 | gap 1, opp_overlap 2190461 2190463, overlap 2190474 AAATATCTATGACAA TACTACATGGAAAGA CAA TCTG-CCATGTAGTA TCTCCTGAAACAATC CD1884 2190355 - 2190636 + | hypothetical protein TERM 2356 2190690 - 2190738 + F 100 -14.4 -3.04461 | gap 1, opp_overlap 2190683 2190718 2190722, overlap 2190685 TAATATTATTGACTT GTAGTCTAATTAGACTATAATAT AAAC ATAG-ATAGTCTAATTAGACTAC TATTAAAAATAAATA TERM 2357 2190784 - 2190794 + G 70 -4 -4.87626 | opp_overlap 2190784 2190778 2190793 AAAGGATAATAATAA TGAT TAA ATCA TTTTTAATGTTAGGA CD1885 2190783 - 2191631 + | putative acetyl xylan esterase CD1886 2191683 - 2192204 + | PadR-family transcriptional regulator TERM 2358 2192250 - 2192222 - f 93 -6.9 -5.95946 | opp_overlap 2192221 2192224 TTAATAATAAAAAAA CATACATATATAC TTT ATATAAATGTATG ATATATAGATTAAAA TERM 2359 2192657 - 2192645 - g 81 -2.7 -5.80364 | ACTCTAATAAAAAAA TACTA TGA TAGCA TCTATTGTTATTGTT CD1887 2192555 - 2193088 + | RNA polymerase sigma factor TERM 2360 2193286 - 2193300 + G 73 -3.6 -5.33405 | overlap 2193288 CAATTTCTAATACTA TGTACA ATA TGTATA TTTTTATTTAGTACA CD1888 2193085 - 2193846 + | hypothetical protein CD1889 2193884 - 2194750 + | ABC transporter, ATP-binding protein CD1890 2194771 - 2196012 + | hypothetical protein TERM 2361 2197045 - 2197087 + F 100 -12.6 -4.55295 | opp_overlap 2197045 ATATATAAGGAAAAA TTTTTTAATAATATAAATCA TAT TCATTTATATTATTAAAAAA TTTGTTTATAGAAAC TERM 2362 2197087 - 2197045 - f 100 -12.6 -4.9755 | opp_overlap 2197045 ATATATAAGGAAAAA TTTTTTAATAATATAAATCA TAT TCATTTATATTATTAAAAAA TTTGTTTATAGAAAC CD1892 2197194 - 2197928 + | hypothetical protein TERM 2363 2198029 - 2198055 + T 100 -9.5 -5.15969 | opp_overlap 2198027 2198030, overlap 2198030 2198050 ACACCAGTAGTAAGG AGGCAAAAGCA TTCGT TGCTTTTGCCA TTTTTTAAGTTGCAA TERM 2364 2198030 - 2198054 + T 95 -13 -3.68859 | opp_overlap 2198027 2198030, overlap 2198029 2198050 CACCAGTAGTAAGGA GGCAAAAGCA TTCGT TGCTTTTGCC ATTTTTTAAGTTGCA TERM 2365 2198054 - 2198030 - T 91 -13 -2.80492 | opp_overlap 2198030 2198029 2198050, overlap 2198027 CACCAGTAGTAAGGA GGCAAAAGCA TTCGT TGCTTTTGCC ATTTTTTAAGTTGCA CD1893 2198562 - 2198071 - | putative regulatory protein CD1894 2198911 - 2199294 + | putative plasmid-related protein TERM 2366 2199471 - 2199501 + F 100 -7.7 -5.44721 | opp_overlap 2199460 2199477, overlap 2199477 CAAATCTAATTAAAT TAAAAAGAGAGGA TTAAT TCCTCTCTTATTG TTTTTTTGAGATACT TERM 2367 2199495 - 2199477 - f 100 -8.9 -5.04222 | opp_overlap 2199477 2199471 TAATTAAATTAAAAA GAGAGGA TTAAT TCCTCTC TTATTGTTTTTTTGA TERM 2368 2199477 - 2199495 + F 86 -8.9 -4.48073 | opp_overlap 2199477, overlap 2199471 TAATTAAATTAAAAA GAGAGGA TTAAT TCCTCTC TTATTGTTTTTTTGA CD1895 2199802 - 2200185 + | hypothetical protein CD1896 2200187 - 2200537 + | putative lipoprotein TERM 2369 2200604 - 2200577 - T 86 -9.4 -3.84996 | gap 1, opp_overlap 2200577 AAGATATAATTTAAA CGACCTTA-AAAT AGC ATTTATAAGGTCG TTTTTTATTAGCTTG TERM 2370 2200577 - 2200604 + T 100 -9.4 -5.5074 | gap 1, opp_overlap 2200577 AAGATATAATTTAAA CGACCTTA-AAAT AGC ATTTATAAGGTCG TTTTTTATTAGCTTG CD1897 2201096 - 2200638 - | hypothetical protein CD1898 2201929 - 2201141 - | putative phage-related cell wall hydrolase (endolysin) CD1899 2202505 - 2202068 - | putative phage-related deoxycytidylate deaminase (putative late competence protein) TERM 2371 2202701 - 2202723 + r 86 -9.2 -4.13945 | opp_overlap 2202701 2202719 TTACAATATAAAAAA CTGTCTCAAT AAA ATAGAGACAG TTTTACAGTCAAAGT TERM 2372 2202723 - 2202701 - R 100 -9.2 -5.5208 | opp_overlap 2202701, overlap 2202719 TTACAATATAAAAAA CTGTCTCAAT AAA ATAGAGACAG TTTTACAGTCAAAGT CD1900 2202948 - 2202739 - | hypothetical protein CD1901 2203327 - 2203836 + | putative phage repressor CD1902 2203863 - 2204015 + | putative transposase (partial) CD1903 2204241 - 2204777 + | putative lipoprotein signal peptidase TERM 2373 2204924 - 2204914 - T 73 -2.6 -5.69262 | GCACAAAAATAAAAA TTAA ATA TTAA ATATAAAGCACAGTT TERM 2374 2205081 - 2205048 - T 93 -7.5 -5.10461 | gap 1 TGGAGGCAATAAAAA GCCAGCAAAGC-CCAT AAA ATAGAGCTGTGCTAGC AACATGATGAGTTAT TERM 2375 2205160 - 2205141 - T 75 -3.6 -5.53288 | opp_overlap 2205141 TTTAATTTAAAAAAA TGATTACT GTAA AGAAATCA TTTTTTATTATAATC TERM 2376 2205141 - 2205160 + T 75 -3.6 -5.58179 | opp_overlap 2205141 TTTAATTTAAAAAAA TGATTACT GTAA AGAAATCA TTTTTTATTATAATC CD1904 2206011 - 2205211 - | ABC transporter, permease protein CD1905 2207804 - 2206206 - | site-specific recombinases TERM 2377 2206508 - 2206518 + g 72 -4 -5.02476 | TATAATCAGAAGCAG TACT ACC AGTA TTTTTTGCAAGCTCT CD1906 2208126 - 2208308 + | hypothetical protein TERM 2378 2208415 - 2208455 + F 100 -14.9 -2.6732 | opp_overlap 2208413 2208415 2208423, overlap 2208423 TGAAGTGTTAAAAGA GCAATGGAGCTCCATAGAT AAA GTCTATGGAGCTTTTTTGC GTATTTAACTTAAGG TERM 2379 2208455 - 2208415 - f 90 -9.8 -3.67 | opp_overlap 2208415 2208423, overlap 2208413 2208423 TGAAGTGTTAAAAGA GCAATGGAGCTCCATAGA TAAAG TCTATGGAGCTTTTTTGC GTATTTAACTTAAGG TERM 2380 2208447 - 2208423 - f 90 -13 -2.63041 | opp_overlap 2208415 2208423, overlap 2208413 2208415 TAAAAGAGCAATGGA GCTCCATAGA TAAAG TCTATGGAGC TTTTTTGCGTATTTA TERM 2381 2208423 - 2208447 + F 100 -13.7 -5.18561 | opp_overlap 2208413 2208423 2208415, overlap 2208415 TAAAAGAGCAATGGA GCTCCATAGAT AAA GTCTATGGAGC TTTTTTGCGTATTTA TERM 2382 2209162 - 2209152 - g 82 -5.4 -5.38951 | opp_overlap 2209150 2209152 AAGCTAGAGAAAAAA TGCA CAA TGCA TCTTGTTTAGCAGGT TERM 2383 2209259 - 2209241 - g 72 -6.8 -4.12188 | GTATTAGGTGGAAAA TTCCATAT ACC ACATGGAA GAACAAACTCTATAT TERM 2384 2209532 - 2209518 - g 79 -7.2 -4.46976 | ATGAAGAAAGAGAAA TAGCAA AAC TTGCTA TAAAAGATACTTGTA pduQ 2208482 - 2209612 + | putative ethanolamine/propanediol utilization propanol dehydrogenase TERM 2385 2209736 - 2209717 - f 73 -7.2 -4.06805 | opp_overlap 2209717 AAAACTATAATGAAA GTATCACA AAGG CGTGATAC TTTAGTAGAAAGCAA TERM 2386 2209753 - 2209793 + F 100 -11.3 -5.13722 | opp_overlap 2209753 2209752 TTAGTAGAAAGCAAT GGAGCTTCTTAGGAATATT AAT ATTATTCTTATGGAGCTCC TTTTATTTTAATCAA pduU 2209853 - 2210203 + | putative ethanolamine/propanediol utilization protein pduV 2210211 - 2210645 + | putative ethanolamine/propanediol utilization protein CD1910 2210754 - 2211329 + | two-component response regulator CD1911 2211322 - 2212731 + | two-component sensor histidine kinase eutA 2212915 - 2214348 + | reactivating factor for ethanolamine ammonia lyase eutB 2214366 - 2215730 + | putative ethanolamine/propanediol ammonia-lyase heavy chain eutC 2215743 - 2216624 + | ethanolamine ammonia-lyase small subunit eutL 2216644 - 2217297 + | putative ethanolamine/propanediol utilization protein TERM 2387 2217482 - 2217468 - g 72 -8.6 -3.04398 | overlap 2217467 TCGGTGCTGTAAAAG CTGCTT TAG AAGCAG GTGAAATAGCAGCTT CD1916 2217308 - 2218009 + | putative ethanolamine/propanediol utilisation protein CD1917 2218012 - 2219481 + | putative ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase eutM 2219567 - 2219854 + | putative ethanolamine/propanediol utilization protein TERM 2388 2220108 - 2220075 - g 72 -6.9 -4.1023 | gap 1, opp_overlap 2220075 AAGGTCAAATAATAA CTCCT-TCTGCTAAAT CTT ATTTAGCTGAGAGAAG TATTGAGCTTAAATA eutT 2219981 - 2220742 + | putative ethanolamine/propanediol utilization cobalamin adenosyltransferase CD1920 2220755 - 2221384 + | putative propanediol/ethanolamine utilization protein CD1921 2221426 - 2222151 + | ethanolamine utilization/propanediol protein eutN 2222164 - 2222436 + | putative ethanolamine/propanediol utilization protein CD1923 2222429 - 2222980 + | putative ethanolamine/propanediol utilization protein eutH 2222992 - 2224083 + | putative ethanolamine/propanediol transporter eutQ 2224085 - 2224558 + | putative ethanolamine/propanediol utilization protein TERM 2389 2224639 - 2224660 + T 100 -10.3 -5.60993 | opp_overlap 2224639 CACATATTTAAAAAA GCTATGAAT TAAA ATTCATAGC TTTTTTTATAAAGAA TERM 2390 2224660 - 2224639 - T 100 -10.3 -5.14477 | opp_overlap 2224639 CACATATTTAAAAAA GCTATGAAT TAAA ATTCATAGC TTTTTTTATAAAGAA CD1926 2225070 - 2224678 - | AraC family transcription regulator CD1928 2225996 - 2227354 + | hypothetical protein CD1929 2227347 - 2227979 + | hypothetical protein CD1930 2228308 - 2229465 + | hypothetical protein dinR 2230259 - 2229612 - | SOS regulatory protein CD1932 2231478 - 2230351 - | putative tyrosine recombinase TERM 2391 2231671 - 2231714 + r 100 -11.6 -5.34555 | gap 1, opp_overlap 2231681 ATTACTCTTTTTTTA TTTCTCAATATATTTATAGAA ATA TTTTA-AAATATATTGAGAAA TTTTTTATGCTCTAC CD1933 2232645 - 2231800 - | hypothetical protein TERM 2392 2232330 - 2232342 + g 77 -4.9 -5.29782 | overlap 2232326 AATTTCCTATACTTT GATAA AGA TTATC TTTTTTATAGCTATG CD1934 2233046 - 2232675 - | hypothetical protein spoVS 2233459 - 2233199 - | stage V sporulation protein S accA 2234592 - 2233648 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 2393 2233790 - 2233800 + g 76 -6.8 -4.37552 | overlap 2233787 ACATCTTTTTGTGCT CCTC CAA GAGG TTCTTTTATAATCTT TERM 2394 2234376 - 2234357 - G 70 -3.6 -5.055 | opp_overlap 2234358 2234360, overlap 2234346 2234358 TGAAGTTCTAAAAAA TTAGAACA AATA TGTTCTAT GTATTCCAATGTCGT TERM 2395 2234519 - 2234562 + g 78 -4 -5.43553 | opp_overlap 2234531, overlap 2234521 AAATCTATATTATTT GCCTTAGAAATAGTTATTAA TTGT TTAATATCATTTTCTAAGAC TTTTATTTTTTCACT accD 2235467 - 2234613 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit beta accC 2236843 - 2235482 - | biotin carboxylase (acetyl-CoA carboxylase subunit A) TERM 2396 2236355 - 2236369 + g 79 -7.1 -4.46212 | CATACCTTTTCCACC GCCTC CACTT GAGGC TTTTATCATAACAGG accB 2237311 - 2236859 - | biotin carboxyl carrier protein of acetyl-CoA carboxylase TERM 2397 2237403 - 2237382 - R 85 -5.9 -5.54907 | TTTATAAAAGAAAAA GTGCTGACT AGAG AATCAACAC ATCAATATATCTTTT CD1940 2238036 - 2237581 - | hypothetical protein TERM 2398 2238658 - 2238600 - R 100 -10.7 -4.38712 | gap 1, opp_overlap 2238602 2238606, overlap 2238601 2238602 2238606 TCTATTTCTATAAAA TTTAAAGGTTGCTAGTAACAAATCACTA ATAT TAGCGTTCTGTTACTAACAACCTTTAT- TTTGATTATACACTT TERM 2399 2238658 - 2238601 - R 100 -16.7 -3.22906 | opp_overlap 2238602 2238606, overlap 2238600 2238602 2238606 CTATTTCTATAAAAT TTAAAGGTTGCTAGTAACAAATCACTA ATAT TAGCGTTCTGTTACTAACAACCTTTAT TTTGATTATACACTT TERM 2400 2238657 - 2238602 - R 100 -20.2 -2.53422 | opp_overlap 2238602 2238606, overlap 2238600 2238601 2238606 TATTTCTATAAAATT TAAAGGTTGCTAGTAACAAATCACTA ATAT TAGCGTTCTGTTACTAACAACCTTTA TTTTGATTATACACT TERM 2401 2238602 - 2238657 + r 100 -13.6 -4.49389 | opp_overlap 2238602 2238600 2238601 2238606, overlap 2238606 TATTTCTATAAAATT TAAAGGTTGCTAGTAACAAATCACTA ATAT TAGCGTTCTGTTACTAACAACCTTTA TTTTGATTATACACT TERM 2402 2238653 - 2238606 - R 100 -16.6 -3.96705 | opp_overlap 2238602 2238606, overlap 2238602 2238600 2238601 TCTATAAAATTTAAA GGTTGCTAGTAACAAATCACTA ATAT TAGCGTTCTGTTACTAACAACC TTTATTTTGATTATA TERM 2403 2238606 - 2238653 + r 100 -10 -4.80487 | opp_overlap 2238606 2238602 2238600 2238601, overlap 2238602 TCTATAAAATTTAAA GGTTGCTAGTAACAAATCACTA ATAT TAGCGTTCTGTTACTAACAACC TTTATTTTGATTATA CD1941 2239455 - 2238709 - | hypothetical protein CD1942 2240267 - 2239584 - | tRNA guanine-N(7)-methyltransferase TERM 2404 2240343 - 2240302 - R 84 -4.8 -5.77571 | gap 2 ACCAAAAAATAAAAA GAACTCTCTTAAAATAGAAA TTTA TTTCTATA--AAGAGAGTTC TAAACTTACTAAAAA CD1943 2240686 - 2240366 - | hypothetical protein TERM 2405 2240866 - 2240913 + r 72 -6.1 -4.46656 | opp_overlap 2240869 2240873, overlap 2240869 2240873 TATCATAAACTTAGT AAACAAATAAAATTATTAT TCTAAAAAAT ATAATAATTTTATTTGTTG TTTTAATATTATAAC TERM 2406 2240869 - 2240910 + r 78 -7.8 -4.33487 | opp_overlap 2240869 2240873, overlap 2240866 2240873 CATAAACTTAGTAAA CAAATAAAATTATTAT TCTAAAAAAT ATAATAATTTTATTTG TTGTTTTAATATTAT TERM 2407 2240910 - 2240869 - R 90 -9.9 -3.83169 | opp_overlap 2240869 2240866 2240873, overlap 2240873 CATAAACTTAGTAAA CAAATAAAATTATTATTCT AAAA AATATAATAATTTTATTTG TTGTTTTAATATTAT TERM 2408 2241113 - 2241080 - R 76 -9.7 -2.88945 | opp_overlap 2241085, overlap 2241085 TTCATGTATAATAAG TAAAAGCACAACGGT ATAT ACTGTTGTGCTTTTT TGTAATTAATAAACA TERM 2409 2241108 - 2241085 - R 93 -9.6 -4.59414 | opp_overlap 2241085, overlap 2241080 GTATAATAAGTAAAA GCACAACGGT ATAT ACTGTTGTGC TTTTTTGTAATTAAT TERM 2410 2241085 - 2241108 + r 100 -11.8 -5.38249 | opp_overlap 2241080 2241085 GTATAATAAGTAAAA GCACAACGGT ATAT ACTGTTGTGC TTTTTTGTAATTAAT CD1944 2241387 - 2241139 - | hypothetical protein CD1945 2241879 - 2241418 - | putative glyoxalase CD1946 2242750 - 2241917 - | AraC family transcription regulator CD1947 2243722 - 2243024 - | ABC transporter, ATP-binding protein CD1948 2246202 - 2243725 - | putative ABC transporter, permease protein TERM 2411 2246384 - 2246345 - R 100 -8.2 -5.63517 | CCCTTAAATAAAAAA GATTGATAAACTACTATA TAAA TATAATAATCTATCAACC TTAATATATTTTTTA CD1949 2247824 - 2246421 - | putative two-component sensor histidine kinase TERM 2412 2248141 - 2248129 - H 83 -3.5 -6.04419 | AAAAGAATAAAAAAA TTATA ATA TATAA AAAACTTCATAGGAG CD1950 2248318 - 2249178 + | hypothetical protein TERM 2413 2249273 - 2249238 - T 100 -18.6 -4.67353 | opp_overlap 2249238 CGATTTATTCAAAAA GAGTGTCTCATAAACT TTTT AGTTCATGAGACACTC TTTTTTGTATAAAAT TERM 2414 2249238 - 2249273 + T 100 -16.4 -5.37043 | opp_overlap 2249238 CGATTTATTCAAAAA GAGTGTCTCATAAACT TTTT AGTTCATGAGACACTC TTTTTTGTATAAAAT CD1951 2249974 - 2249417 - | putative acetyltransferase CD1952 2251051 - 2250164 - | LysR family transcriptional regulator CD1953 2251170 - 2252369 + | hypothetical protein TERM 2415 2252431 - 2252475 + T 100 -20.5 -4.56883 | opp_overlap 2252431 GAAAATTTATTAAAA CCTCTTAATAGATATGACTTT TCA AGAGTTATATCTATTAAGAGG TTTATTTAATGTTCA TERM 2416 2252475 - 2252431 - T 100 -16.1 -4.34771 | opp_overlap 2252431 GAAAATTTATTAAAA CCTCTTAATAGATATGACTTT TCA AGAGTTATATCTATTAAGAGG TTTATTTAATGTTCA CD1954 2255118 - 2252563 - | putative ABC transporter, permease protein TERM 2417 2254102 - 2254090 - G 75 -4.1 -5.28176 | TTCACTTATAAAAAA TGCTC CTG GAACA ATATCACTACTCAAA CD1955 2255801 - 2255115 - | ABC transporter, ATP-binding protein CD1956 2256786 - 2255878 - | two-component sensor histidine kinase CD1957 2257459 - 2256788 - | two-component response regulator TERM 2418 2257640 - 2257686 + H 100 -11.4 -5.15381 | opp_overlap 2257640 2257674 2257683 2257685, overlap 2257683 CGCTTAAATTGAAAA TATAACTTTATTCTTATATAAT TAA ATTATACAATAATAAAGTTATA TTTTTTAAATATATT TERM 2419 2257686 - 2257640 - H 100 -13.6 -4.35524 | opp_overlap 2257640 2257683, overlap 2257674 2257683 2257685 CGCTTAAATTGAAAA TATAACTTTATTCTTATATAAT TAA ATTATACAATAATAAAGTTATA TTTTTTAAATATATT TERM 2420 2257683 - 2257699 + H 71 -5.3 -4.72272 | opp_overlap 2257640 2257683 2257674 2257685, overlap 2257640 ATACAATAATAAAGT TATATTT TTT AAATATA TTTTTACTAGGGGGA CD1958 2257748 - 2258785 + | putative reductive dehalogenase TERM 2421 2258791 - 2258842 + F 90 -12.1 -3.02973 | gap 1, opp_overlap 2258787 2258796, overlap 2258796 2258800 GTTGAAATAATTTTA TTTAATAAAGAATCTGTACTA-GA ATTTA TCATAGGACAGGTTCTTTATTAAA TATATAAATTTTTAA CD1959 2258943 - 2259629 + | two-component system response regulator CD1960 2259619 - 2260650 + | two-component sensor histidine kinase CD1961 2260732 - 2261397 + | ABC transporter, ATP-binding protein TERM 2422 2261635 - 2261625 - g 76 -2.6 -5.54079 | TGAAAAAGCAAAAAA TATA CTA TATA AAGATAAAAACTTTA TERM 2423 2261802 - 2261787 - g 81 -4.8 -5.38958 | ACCTACAAATAAAAA TGAAAT TGCT ATTTCA GAAAAATATTTACAG CD1962 2261410 - 2263827 + | ABC transporter, permease protein TERM 2424 2263881 - 2263935 + T 100 -11.2 -5.54907 | gap 1, opp_overlap 2263884 2263885 2263888, overlap 2263885 2263886 TAATATGATTTTTTA AAAGCTATAGGGATAGAAAATTTTG ACTTTA CATAATTTTCTATCCCTATA-CTTG TTTTTATTTTATACA TERM 2425 2263932 - 2263884 - T 100 -12.9 -4.10161 | gap 1, opp_overlap 2263881 2263885 2263886, overlap 2263885 2263888 TATGATTTTTTAAAA GCTATAGGGATAGAAAATTTTG ACTTTA CATAATTTTCTATCCCTATA-C TTGTTTTTATTTTAT TERM 2426 2263885 - 2263932 + T 100 -13.1 -4.82111 | opp_overlap 2263884 2263885 2263888, overlap 2263881 2263886 ATGATTTTTTAAAAG CTATAGGGATAGAAAATTTTG ACTTTA CATAATTTTCTATCCCTATAC TTGTTTTTATTTTAT TERM 2427 2263932 - 2263885 - T 95 -13.1 -3.05775 | opp_overlap 2263885 2263881 2263886, overlap 2263884 2263888 ATGATTTTTTAAAAG CTATAGGGATAGAAAATTTTG ACTTTA CATAATTTTCTATCCCTATAC TTGTTTTTATTTTAT TERM 2428 2263886 - 2263931 + T 100 -16.6 -3.45606 | opp_overlap 2263884 2263885 2263888, overlap 2263885 2263881 TGATTTTTTAAAAGC TATAGGGATAGAAAATTTTG ACTTTA CATAATTTTCTATCCCTATA CTTGTTTTTATTTTA TERM 2429 2263929 - 2263888 - T 100 -14.8 -2.74784 | opp_overlap 2263886 2263885 2263881, overlap 2263884 2263885 ATTTTTTAAAAGCTA TAGGGATAGAAAATTTTG ACTTTA CATAATTTTCTATCCCTA TACTTGTTTTTATTT CD1963 2264799 - 2264008 - | hypothetical protein TERM 2430 2264510 - 2264528 + g 75 -7.5 -4.05172 | opp_overlap 2264508 2264506 2264504, overlap 2264504 ACAGATAAATCCATA GCATTAC CCTGA GTAATGC TTGTATTTTCATTTG CD1964 2265419 - 2264832 - | hypothetical protein TERM 2431 2265586 - 2265548 - R 77 -7.7 -4.11748 | gap 1, opp_overlap 2265548, overlap 2265546 CTTATAAATAAAACA TGAGTTGCAATTAATCTA TTAA TAGAT-AACAGCAACTCA GATTTTCCTTTAAAT CD1965 2266987 - 2265596 - | hypothetical protein CD1966 2268475 - 2267177 - | putative acyl-CoA thioesterase TERM 2432 2267724 - 2267741 + g 81 -6.3 -5.09521 | opp_overlap 2267740 AAACAATAAATGTGA GGTTGTG ATAC TACAACC TTTTTAATTTGTTCA TERM 2433 2268744 - 2268726 - R 79 -3.8 -5.80951 | opp_overlap 2268731 ATTCAAAATAAAAAA CCACTCAT TTT AAGAATGG TTTTTAATATAAACT CD1967 2269709 - 2268834 - | hypothetical protein TERM 2434 2269873 - 2269842 - R 100 -9 -5.63517 | opp_overlap 2269842 2269840 2269835 CTTCTAAATAAAAAA TTTGTCTAAAGTTT CTAA AAAATTTAGACAAA TCTTATGTTATTACT TERM 2435 2269842 - 2269873 + r 79 -9 -3.50437 | opp_overlap 2269842, overlap 2269840 2269835 CTTCTAAATAAAAAA TTTGTCTAAAGTTT CTAA AAAATTTAGACAAA TCTTATGTTATTACT CD1968 2270588 - 2269902 - | hypothetical protein CD1969 2271188 - 2270637 - | putative regulatory protein CD1970 2271846 - 2271214 - | putative cyclase CD1971 2273075 - 2271936 - | hypothetical protein TERM 2436 2272254 - 2272242 - G 71 -4.9 -4.70266 | opp_overlap 2272242 2272251, overlap 2272234 AACATTACTTAAAAA TATGT TTG ACATA TTCTTAAAATATGTT TERM 2437 2273140 - 2273095 - R 95 -10.7 -3.9093 | opp_overlap 2273095 2273093 2273098 2273099, overlap 2273099 TTTATGATACAACAA TAAAGCTGTCTTTTACTAGAA AAAA TCCTATTACAAGACAGCCTTA TATTATATTAAATCT TERM 2438 2273136 - 2273099 - R 93 -9.3 -4.55093 | opp_overlap 2273099 2273098 2273095 2273093, overlap 2273095 TGATACAACAATAAA GCTGTCTTTTACTAGAA AAAA TCCTATTACAAGACAGC CTTATATTATATTAA CD1972 2274509 - 2273148 - | hypothetical protein TERM 2439 2274458 - 2274470 + g 72 -2.7 -5.41941 | AAATCATTTCATCTT GTAGA GAA TTTAC TTTTTCTTTAATTTG CD1973 2275843 - 2274563 - | hypothetical protein hfQ 2276230 - 2275970 - | HfQ protein miaA 2277294 - 2276344 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 2440 2276570 - 2276580 + g 72 -4 -5.09225 | CCTATACCTTGCATT GATA TCA TATC TTTTTTAAATCCCAT mutL 2279284 - 2277317 - | DNA mismatch repair protein mutS 2282144 - 2279295 - | DNA mismatch repair protein TERM 2441 2282230 - 2282263 + r 79 -9.8 -2.69489 | opp_overlap 2282231, overlap 2282234 GACATATAACTAAAA ACAATCCAAAATGT ATACTC ACATTTTGGATTGC TAAGTTTAATGCTTA TERM 2442 2282262 - 2282231 - R 100 -14 -4.9755 | opp_overlap 2282230 2282234 ACATATAACTAAAAA CAATCCAAAATGTA TACT CACATTTTGGATTG CTAAGTTTAATGCTT TERM 2443 2282234 - 2282259 + r 80 -9.2 -3.25802 | opp_overlap 2282231, overlap 2282230 TATAACTAAAAACAA TCCAAAATGT ATACTC ACATTTTGGA TTGCTAAGTTTAATG CD1978 2283035 - 2282298 - | ABC transporter, ATP-binding protein TERM 2444 2282622 - 2282643 + gr 71 -7.3 -3.72229 | overlap 2282621 AGCCCTCTGTCTCAT TCCTCCAGA AAGT TCTGAAGGA TATTTATCTTCATAT CD1979 2284014 - 2283001 - | ABC transporter, substrate-binding protein CD1980 2284806 - 2284036 - | ABC transporter, permease protein TERM 2445 2284127 - 2284113 - GR 74 -7.2 -3.93578 | TTAAACTAAATATAA CTACTA ATA TAGTAG ATGCAAATACTTTAT TERM 2446 2284146 - 2284157 + gr 73 -5.8 -4.62069 | opp_overlap 2284146 CAAATACTTTATCAA GTGC ATAT GCAC TTTTTGACCTAAGCA TERM 2447 2284208 - 2284245 + gr 79 -8.7 -3.69216 | opp_overlap 2284217, overlap 2284207 GTTCCACCTAGCCAT TCTGCAACAGT-TGCTG CCATTA CAGCATAC-GTTGCAGA TATTTTAAGTCCAGA TERM 2448 2284416 - 2284406 - GR 70 -4 -4.86226 | ATAGGAAAAAAACAA GTAA GCA TTAC CATCAATACTTTTGG CD1980A 2285071 - 2284781 - | hypothetical protein TERM 2449 2285097 - 2285113 + r 75 -3.7 -5.55001 | opp_overlap 2285099, overlap 2285099 CCTTTAAAAATAATT AATACCT ACT AGGTATA TTTTGTTTTTTATTA TERM 2450 2285099 - 2285111 + r 70 -6.3 -4.34916 | opp_overlap 2285099, overlap 2285097 TTTAAAAATAATTAA TACCT ACT AGGTA TATTTTGTTTTTTAT TERM 2451 2285171 - 2285200 + r 93 -8 -5.10767 | opp_overlap 2285174, overlap 2285174 TATTTAAATAAAAGA AAAGTCTTATCC AAAATA GGATAAGACTTA TTTTTATCTTAACTG TERM 2452 2285174 - 2285197 + r 93 -9.7 -4.63863 | opp_overlap 2285174, overlap 2285171 TTAAATAAAAGAAAA GTCTTATCC AAAATA GGATAAGAC TTATTTTTATCTTAA TERM 2453 2285197 - 2285174 - R 100 -9.7 -5.34857 | opp_overlap 2285174 2285171 TTAAATAAAAGAAAA GTCTTATCC AAAATA GGATAAGAC TTATTTTTATCTTAA TERM 2454 2285354 - 2285396 + r 83 -9.7 -3.47751 | opp_overlap 2285363, overlap 2285352 TTAACAAATTTTTTA TTTATATTAGATATTTT ATCCGTTCA AAAATATCTAATATAAA TTGTACATTATTACA TERM 2455 2286008 - 2286028 + r 72 -4.8 -4.92363 | ATGTCAGCCAGTTGC CAAAGAGA TATTT TCTTTTTG TTTTTATGAATGTTT TERM 2456 2286119 - 2286104 - R 70 -7.6 -3.36655 | GTACACATATACTAA CTGCAT ATAT ATGCAG TTCACGCGATTACTG CD1981 2286711 - 2286355 - | putative transcriptional regulator CD1984 2288110 - 2288721 + | NUDIX-family protein TERM 2457 2289110 - 2289094 - g 77 -7.3 -4.28774 | TTATTTAATGGAAAA GCCAGTA TGC TACTAGC AGGTTATAACTCTAT CD1985 2289019 - 2289357 + | hypothetical protein TERM 2458 2289373 - 2289398 + T 70 -4.8 -4.87037 | ATAGTTGTAAGTTGA GCAGTTAATT ATAAAA GATTGACTGC TTTTTCATGTATATT CD1986 2291200 - 2289764 - | putative radical SAM protein TERM 2459 2291104 - 2291117 + g 70 -5.3 -4.67354 | TCTTTCCAGTTCTGT TGAAG TATT CTTCA TTTTGTCTGTGTATT TERM 2460 2291274 - 2291264 - R 72 -4 -5.39905 | opp_overlap 2291264 ATCAAATAAGAAAAA TCTT TTA AAGA TATTATTATTTTTCT TERM 2461 2291402 - 2291375 - R 90 -7.2 -5.34365 | opp_overlap 2291375 TTATAATAATAAAAA GATGTTTTAAAT TAAA ACTTAAAACACC TTTCCTTAAATAAAA CD1987 2292884 - 2291448 - | cell surface protein TERM 2462 2292046 - 2292061 + g 78 -6.2 -4.71828 | overlap 2292054 GAAGTTATCTTCTTA GCATTT TTTA AAATGC TTTTATTGCTACCAT TERM 2463 2293093 - 2293103 + r 82 -2.6 -6.19302 | TTATAATTATATTTT TATT CTT AATA TTTTTTTTATTATGT TERM 2464 2293618 - 2293672 + r 100 -11.2 -3.87538 | opp_overlap 2293615 2293623 2293626 2293634, overlap 2293619 2293626 TATAATACCAAATCT TTAAACAACATAAGAATAAAATAGTT ATA ATCTACTTTATTCTTATGTTATTTAG TTATTATAATGCTTT TERM 2465 2293619 - 2293671 + r 89 -12.5 -2.91438 | opp_overlap 2293615 2293623 2293626 2293634, overlap 2293618 2293626 ATAATACCAAATCTT TAAACAACATAAGAATAAAATAGTT ATA ATCTACTTTATTCTTATGTTATTTA GTTATTATAATGCTT TERM 2466 2293667 - 2293623 - R 100 -13.3 -3.64682 | opp_overlap 2293619 2293618 2293626, overlap 2293615 2293626 2293634 TACCAAATCTTTAAA CAACATAAGAATAAAATAGTT ATA ATCTACTTTATTCTTATGTTA TTTAGTTATTATAAT TERM 2467 2293664 - 2293626 - R 100 -12.8 -3.95071 | opp_overlap 2293619 2293618 2293626, overlap 2293623 2293615 2293634 CAAATCTTTAAACAA CATAAGAATAAAATAGTT ATA ATCTACTTTATTCTTATG TTATTTAGTTATTAT TERM 2468 2293626 - 2293664 + r 95 -10.6 -4.1648 | opp_overlap 2293626 2293623 2293615 2293634, overlap 2293619 2293618 CAAATCTTTAAACAA CATAAGAATAAAATAGTT ATA ATCTACTTTATTCTTATG TTATTTAGTTATTAT trpP 2294263 - 2293712 - | putative tryptophan transport protein TERM 2469 2294400 - 2294427 + r 87 -9.9 -3.33261 | opp_overlap 2294401 2294422, overlap 2294401 TCAGTAAAATAAAAA ACTCCGTCCTA AACTAA TAGGACGGAGA TTATCCGCGTTGCCA TERM 2470 2294426 - 2294401 - R 100 -13.4 -5.83211 | opp_overlap 2294400 2294401, overlap 2294422 CAGTAAAATAAAAAA CTCCGTCCTA AACTAA TAGGACGGAG ATTATCCGCGTTGCC TERM 2471 2294401 - 2294426 + r 91 -13.4 -2.59742 | opp_overlap 2294401 2294422, overlap 2294400 CAGTAAAATAAAAAA CTCCGTCCTA AACTAA TAGGACGGAG ATTATCCGCGTTGCC TERM 2472 2294784 - 2294739 - R 72 -8.1 -3.1916 | opp_overlap 2294739 2294741 2294763, overlap 2294740 TAAAAAATGTCAATA CCTTTTTATAAAAAATATATT TTGT AATCTATTTTTTATAAAAAAA GTAAATTATACTATA TERM 2473 2294783 - 2294740 - R 75 -9.4 -2.50411 | opp_overlap 2294739 2294741 2294763, overlap 2294739 AAAAAATGTCAATAC CTTTTTATAAAAAATATATT TTGT AATCTATTTTTTATAAAAAA AGTAAATTATACTAT TERM 2474 2294987 - 2294948 - R 95 -12.6 -3.59627 | opp_overlap 2294946 2294943 ATTAAATTCTTCAAA GTTAATTAAGTACATTTA TCAA TAAATTTACTTAATTAAC CATCATTTAATACTC TERM 2475 2295111 - 2295121 + r 73 -2.6 -5.74288 | TATTCTTTTAATTAT TTTT AGT AAAA TTTTTTCTTCTTTCT CD1989 2295511 - 2295113 - | hypothetical protein TERM 2476 2295792 - 2295832 + r 100 -16.6 -4.33803 | gap 1, opp_overlap 2295803, overlap 2295803 TTCTGTTATAATGTT TCTACAAAAAAGAATCCCA TTAA TGGGATTCTTTTTTGT-GA TTTATTAATATATTT TERM 2477 2295822 - 2295803 - R 100 -10.8 -5.24129 | opp_overlap 2295792 2295803 TGTTTCTACAAAAAA GAATCCCA TTAA TGGGATTC TTTTTTGTGATTTAT TERM 2478 2295803 - 2295822 + r 100 -10.8 -5.43621 | opp_overlap 2295803, overlap 2295792 TGTTTCTACAAAAAA GAATCCCA TTAA TGGGATTC TTTTTTGTGATTTAT CD1990 2296352 - 2295867 - | hypothetical protein TERM 2479 2296643 - 2296677 + H 71 -6.7 -4.16904 | opp_overlap 2296643 TTTATATTTATTCAA TTACTGTTCTTTATA GTCAA TATAAAAGACAGTAA TTTATCTATAGTGTT cspC 2298045 - 2298245 + | cold shock protein TERM 2480 2298281 - 2298266 - f 72 -7.6 -3.53563 | opp_overlap 2298266 AGATTTTTCGGGAAA GACTCT TTTT AGAGTC TTTTTTTATTGTTAA TERM 2481 2298266 - 2298281 + F 100 -7.6 -5.95946 | opp_overlap 2298266 AGATTTTTCGGGAAA GACTCT TTTT AGAGTC TTTTTTTATTGTTAA TERM 2482 2298409 - 2298383 - f 75 -3.7 -5.47399 | opp_overlap 2298384 2298386, overlap 2298386 TGAATTTCAAAAAAA TAAGCACTCCT ATAAA AAGAGTGCTCT TAATGTAAATATAAA TERM 2483 2298406 - 2298386 - f 86 -7.6 -4.80853 | opp_overlap 2298386 2298384, overlap 2298383 ATTTCAAAAAAATAA GCACTCCT ATAAA AAGAGTGC TCTTAATGTAAATAT CD1991 2298996 - 2299178 + | integrase (partial) TERM 2484 2299600 - 2299584 - g 71 -2.3 -5.47159 | opp_overlap 2299587, overlap 2299585 TTTTAATATAAAAAA CCTTCTT TAT AAAAAAG ATGATTCTCTAAAAG CD1992 2299249 - 2300094 + | putative lipoprotein TERM 2485 2300097 - 2300083 - T 83 -3.6 -5.94214 | opp_overlap 2300085, overlap 2300085 AATACAATAAAAAAA CATCTA AAC TAGATA TTTAATTTTTGAATT TERM 2486 2300310 - 2300272 - T 73 -3.2 -5.47914 | opp_overlap 2300275, overlap 2300275 AAAAATCATAAAAAA GAAGGTATAAAGAGCT ACCCTCA AGCTCAATATACCTTA TAAATATCTAAACTT TERM 2487 2300307 - 2300275 - T 70 -4.9 -4.75967 | opp_overlap 2300275, overlap 2300272 AATCATAAAAAAGAA GGTATAAAGAGCT ACCCTCA AGCTCAATATACC TTATAAATATCTAAA CD1992A 2300482 - 2300318 - | hypothetical protein CD1993 2301355 - 2301023 - | putative decarboxylase CD1994 2302240 - 2301599 - | hypothetical protein CD1994A 2302520 - 2302221 - | transcription regulator ArsR TERM 2488 2302581 - 2302610 + r 95 -10.3 -4.0056 | opp_overlap 2302583, overlap 2302584 TCCATTTTATTTCAA TAGCTATTTAGAA ATTT TTCTAAATAGTTA TTTCTAAATATTTAT TERM 2489 2302584 - 2302607 + r 93 -9.8 -4.10791 | opp_overlap 2302583, overlap 2302581 ATTTTATTTCAATAG CTATTTAGAA ATTT TTCTAAATAG TTATTTCTAAATATT TERM 2490 2302798 - 2302774 - R 95 -10.3 -3.95183 | TTATATATATAACAA TACTTTTAATT TTA AATTAAAAGTA GCTAAACCCAATTTA TERM 2491 2303045 - 2303019 - R 100 -13.2 -5.10154 | opp_overlap 2303023 ATGTAAAATTAAAAA TACAGGAATGAA AAT TCCATTCCTGTA TAAAATCTAACTTTT CD1995 2304234 - 2303482 - | hypothetical protein CD1996 2305948 - 2304293 - | AraC family transcription regulator TERM 2492 2304427 - 2304439 + g 77 -4.9 -5.2166 | TAATACTCATGCTTC TATCT AAC AGATA TTTTTTAGATTCTTC TERM 2493 2306937 - 2306965 + r 72 -7.5 -3.63251 | opp_overlap 2306937 AAAATAAATATAAAA GATGACTCCTGTA CAT TACAAGAATCATC TTATGGTTTCATAAT TERM 2494 2306965 - 2306937 - R 100 -11.9 -4.95487 | opp_overlap 2306937 AAAATAAATATAAAA GATGACTCCTGTA CAT TACAAGAATCATC TTATGGTTTCATAAT TERM 2495 2307058 - 2307092 + r 100 -15.2 -2.7535 | overlap 2307053 2307055 2307054 TTCCGATTGCTGACC CCGTCACTTATGGACA AAA TGTCCATAAGTGATAG TCCTCTCTTAAAACC CD1997 2308243 - 2307221 - | putative proline iminopeptidase CD1998 2309040 - 2308384 - | TetR family transcriptional regulator TERM 2496 2309059 - 2309081 + r 75 -8.6 -3.52079 | overlap 2309065 ATAACTCCTTCTTAT TAAAAACCGA CTG TTGGTTTTTA TTATATAAGCTATTC TERM 2497 2309242 - 2309269 + r 75 -8.4 -3.57462 | opp_overlap 2309245, overlap 2309245 GATTATATCTGTAAG CAAGGCAGGTAT GGCC ACACCTGCCCTG TTTGCCCCTCGGATA TERM 2498 2309266 - 2309245 - R 93 -10.9 -3.35371 | opp_overlap 2309242 2309245 TATATCTGTAAGCAA GGCAGGTAT GGCC ACACCTGCC CTGTTTGCCCCTCGG TERM 2499 2309245 - 2309266 + r 72 -8.7 -2.61695 | opp_overlap 2309245, overlap 2309242 TATATCTGTAAGCAA GGCAGGTAT GGCC ACACCTGCC CTGTTTGCCCCTCGG TERM 2500 2309357 - 2309319 - R 100 -14.1 -2.80816 | gap 1, opp_overlap 2309325, overlap 2309325 TCCTTAGCCATTACA CCAAAACGCCGCTCATTG TCTC CAATG-GCGGCGTTTTAA AGATATGATTTCTCA TERM 2501 2309351 - 2309325 - R 100 -13.1 -4.371 | gap 1, opp_overlap 2309325, overlap 2309319 GCCATTACACCAAAA CGCCGCTCATTG TCTC CAATG-GCGGCG TTTTAAAGATATGAT TERM 2502 2309325 - 2309351 + r 100 -13.1 -4.13282 | gap 1, opp_overlap 2309325 2309319 GCCATTACACCAAAA CGCCGCTCATTG TCTC CAATG-GCGGCG TTTTAAAGATATGAT fldX 2310149 - 2309721 - | flavodoxin TERM 2503 2310238 - 2310220 - R 70 -3.2 -5.43553 | opp_overlap 2310220 ATCTAAAAAACAAAA GATTTC TTTATCT GAAATC TCTTTATTTTTCTAA TERM 2504 2310458 - 2310440 - R 75 -5.3 -5.06505 | AAGTACATAGAAAAA CACACCT TTTCC AGATGTG CTATCTATAATATCG ispD 2311566 - 2310625 - | major intracellular serine protease TERM 2505 2311659 - 2311673 + r 76 -2.2 -5.93252 | CTATATCTACTTATT TATATT TAT GATATA TTTTTTATTTTTAGG CD2001 2312130 - 2311732 - | hypothetical protein CD2002 2312450 - 2312809 + | hypothetical protein TERM 2506 2312830 - 2312790 - T 100 -15.7 -3.04263 | opp_overlap 2312791, overlap 2312793 2312800 2312803 ATGGTATCTTGAACA GCAGAGAGAATAAGAAGTG ATT CACTTCTTATTTTCTCTGT TTTTCTGTGCAGATT TERM 2507 2312791 - 2312829 + T 100 -21.4 -4.9725 | opp_overlap 2312790 2312793 2312800 2312803 TGGTATCTTGAACAG CAGAGAGAATAAGAAGTG ATT CACTTCTTATTTTCTCTG TTTTTCTGTGCAGAT TERM 2508 2312827 - 2312793 - T 100 -16 -2.74523 | opp_overlap 2312791, overlap 2312790 2312800 2312803 GTATCTTGAACAGCA GAGAGAATAAGAAGTG ATT CACTTCTTATTTTCTC TGTTTTTCTGTGCAG TERM 2509 2312820 - 2312800 - T 95 -11.3 -3.64431 | opp_overlap 2312791, overlap 2312793 2312790 2312803 GAACAGCAGAGAGAA TAAGAAGTG ATT CACTTCTTA TTTTCTCTGTTTTTC TERM 2510 2312817 - 2312803 - T 78 -8.6 -3.94067 | opp_overlap 2312791, overlap 2312800 2312793 2312790 CAGCAGAGAGAATAA GAAGTG ATT CACTTC TTATTTTCTCTGTTT CD2002A 2313005 - 2312811 - | hypothetical protein effD 2314542 - 2313220 - | putative efflux pump TERM 2511 2313864 - 2313887 + g 78 -10.4 -2.68823 | opp_overlap 2313866 2313878, overlap 2313863 2313866 TGAAATATTTTGGAA GAGCAGATAA CTGA TTGTCTGCTC GTTGTATACAGACAA TERM 2512 2314379 - 2314392 + g 76 -9.5 -3.07629 | overlap 2314372 AACAGCAGTGAGATT GCGGC AAGA GCCGC TGTGTCATTTAATCT TERM 2513 2314567 - 2314604 + r 100 -15.8 -3.37531 | opp_overlap 2314567, overlap 2314558 2314570 CTCCTTTTCAAAAAA TAAGCCCTATGGAGTT CAAAAA ATCTCCATAGGGCTTA TTGCTGTAATTTTAC TERM 2514 2314604 - 2314567 - R 100 -16.5 -5.00616 | opp_overlap 2314558 2314567 2314570 CTCCTTTTCAAAAAA TAAGCCCTATGGAGTTC AAAA AATCTCCATAGGGCTTA TTGCTGTAATTTTAC TERM 2515 2314570 - 2314601 + r 100 -13.1 -3.80452 | opp_overlap 2314567, overlap 2314567 2314558 CTTTTCAAAAAATAA GCCCTATGGAGTT CAAAAA ATCTCCATAGGGC TTATTGCTGTAATTT effR 2315284 - 2314631 - | MarR family transcriptional regulator TERM 2516 2315086 - 2315114 + g 79 -8.3 -3.9504 | ACTCATTTAGGGATT GTTGGCGTATT CCCAATA AATATGCCAAC TCTTTTGTTGCAATT CD2005 2315816 - 2315421 - | hypothetical protein TERM 2517 2315980 - 2316001 + r 73 -2.9 -5.64274 | opp_overlap 2315980 CGTATTCATCAGTAA GTGTCCCTA AATC TACGGTCAC TTTTTTTCTGGATAC TERM 2518 2316153 - 2316165 + r 73 -7.7 -3.8077 | overlap 2316151 CATACACCATCCTCA CTGGA TTT TCCAG TATTTGTATTTATCT CD2005A 2316417 - 2316304 - | hypothetical protein TERM 2519 2316485 - 2316462 - R 95 -11.2 -3.75024 | opp_overlap 2316455 2316462 TTTTATCATCAACAA TCACAAATCA CTTG TGATTTGTGA TAAGTGATTTGTGAT TERM 2520 2316462 - 2316499 + r 95 -12.3 -3.32022 | opp_overlap 2316462, overlap 2316455 TTTTATCATCAACAA TCACAAATCACTTGTGA TTTG TGATAAGTGATTTGTGA TTAATATATAAAAGC TERM 2521 2316506 - 2316535 + r 100 -10.2 -4.64861 | opp_overlap 2316506 2316508 2316513, overlap 2316508 2316513 GATTTGTGATTAATA TATAAAAGCCCT CTTTAA AGGGCTTTTATG TTTATTTTGAGAAAG TERM 2522 2316535 - 2316506 - R 75 -8.7 -3.1372 | opp_overlap 2316506 2316508 2316513, overlap 2316508 2316513 GATTTGTGATTAATA TATAAAAGCCCTC TTTA AAGGGCTTTTATG TTTATTTTGAGAAAG TERM 2523 2316508 - 2316533 + r 95 -10.6 -3.93868 | opp_overlap 2316508 2316506 2316513, overlap 2316506 2316513 TTTGTGATTAATATA TAAAAGCCCT CTTTAA AGGGCTTTTA TGTTTATTTTGAGAA TERM 2524 2316533 - 2316508 - R 90 -11.3 -3.12895 | opp_overlap 2316506 2316508 2316513, overlap 2316506 2316513 TTTGTGATTAATATA TAAAAGCCCTC TTTA AAGGGCTTTTA TGTTTATTTTGAGAA TERM 2525 2316513 - 2316528 + r 78 -6.1 -4.95487 | opp_overlap 2316508 2316506 2316513, overlap 2316508 2316506 GATTAATATATAAAA GCCCT CTTTAA AGGGC TTTTATGTTTATTTT TERM 2526 2316528 - 2316513 - R 77 -6.8 -4.6955 | opp_overlap 2316513 2316508 2316506, overlap 2316508 2316506 GATTAATATATAAAA GCCCTC TTTA AAGGGC TTTTATGTTTATTTT CD2006 2316794 - 2316537 - | putative topoisomerase (partial) CD2006A 2316962 - 2316831 - | hypothetical protein erm2(B) 2317704 - 2316967 - | rRNA adenine N-6-methyltransferase (erythromycin resistance protein) CD2007A 2317846 - 2317709 - | hypothetical protein TERM 2527 2317893 - 2317947 + r 79 -7.4 -4.62313 | opp_overlap 2317905, overlap 2317898 2317905 ATTTATTTTATCATC ACCTATCACAAATCACAAGTGATT TGTGATT AATCACTTGTGATTTGTGATTCTA TTCTTTTTCATTTTC TERM 2528 2317898 - 2317942 + r 100 -20.5 -4.01454 | opp_overlap 2317905, overlap 2317893 2317905 TTTTATCATCACCTA TCACAAATCACAAGTGATT TGTGATT AATCACTTGTGATTTGTGA TTCTATTCTTTTTCA TERM 2529 2317935 - 2317905 - R 100 -11.4 -3.98214 | opp_overlap 2317898 2317893 2317905 ATCACCTATCACAAA TCACAAGTGATT TGTGATT AATCACTTGTGA TTTGTGATTCTATTC TERM 2530 2317905 - 2317935 + r 100 -11.4 -4.14004 | opp_overlap 2317905, overlap 2317898 2317893 ATCACCTATCACAAA TCACAAGTGATT TGTGATT AATCACTTGTGA TTTGTGATTCTATTC CD2008 2318841 - 2317945 - | putative plasmid replication protein TERM 2531 2318709 - 2318740 + g 72 -2.5 -5.38549 | overlap 2318713 TTCCAACACCACCTT TAAAGTAATTATT CAAGAT AATAATTGCTTCA TTTTTATTGTTTAAA TERM 2532 2318841 - 2318899 + r 100 -11.4 -4.09215 | opp_overlap 2318848 2318855, overlap 2318855 AGTAATATTGTATCA TTAAGAATCACAAATCACAAGTGATT TGTGATT AATCACTTGTGATTTGTGATAAGTGA TTTGTGATTAATATA TERM 2533 2318892 - 2318848 - R 100 -20.5 -3.75024 | opp_overlap 2318841 2318855, overlap 2318855 TTGTATCATTAAGAA TCACAAATCACAAGTGATT TGTGATT AATCACTTGTGATTTGTGA TAAGTGATTTGTGAT TERM 2534 2318855 - 2318885 + r 100 -11.4 -3.98214 | opp_overlap 2318848 2318855, overlap 2318841 ATTAAGAATCACAAA TCACAAGTGATT TGTGATT AATCACTTGTGA TTTGTGATAAGTGAT TERM 2535 2318885 - 2318855 - R 100 -11.4 -4.14859 | opp_overlap 2318855 2318841, overlap 2318848 ATTAAGAATCACAAA TCACAAGTGATT TGTGATT AATCACTTGTGA TTTGTGATAAGTGAT TERM 2536 2318944 - 2318911 - R 87 -10.5 -3.14931 | opp_overlap 2318913 2318920, overlap 2318913 2318920 GTGATTTGTGATTAA TATATAAAAGCCCTC TTTA AAGGGCTTTTATATT TATTTTGAGAAAGAT TERM 2537 2318913 - 2318942 + r 100 -12.4 -4.64861 | opp_overlap 2318911 2318913 2318920, overlap 2318920 GATTTGTGATTAATA TATAAAAGCCCT CTTTAA AGGGCTTTTATA TTTATTTTGAGAAAG TERM 2538 2318942 - 2318913 - R 100 -13.1 -3.1372 | opp_overlap 2318913 2318920, overlap 2318911 2318920 GATTTGTGATTAATA TATAAAAGCCCTC TTTA AAGGGCTTTTATA TTTATTTTGAGAAAG TERM 2539 2318920 - 2318935 + r 78 -6.1 -4.95487 | opp_overlap 2318913 2318911 2318920, overlap 2318913 GATTAATATATAAAA GCCCT CTTTAA AGGGC TTTTATATTTATTTT TERM 2540 2318935 - 2318920 - R 77 -6.8 -4.6955 | opp_overlap 2318920 2318913, overlap 2318913 2318911 GATTAATATATAAAA GCCCTC TTTA AAGGGC TTTTATATTTATTTT CD2009 2319201 - 2318944 - | putative topoisomerase (partial) CD2009A 2319369 - 2319238 - | hypothetical protein erm1(B) 2320111 - 2319374 - | rRNA adenine N-6-methyltransferase (erythromycin resistance protein) TERM 2541 2320111 - 2320135 + g 78 -10.2 -2.87564 | opp_overlap 2320116, overlap 2320116 TTATATTTTTGTTCA TGTAATCACT CCTGA AGTGATTACA TCTATAAACAAATAC ermC 2320331 - 2320236 - | 23S rRNA methylase leader peptide CD2010B 2320529 - 2320383 - | putative plasmid protein (partial) TERM 2542 2321192 - 2321173 - R 100 -8.6 -5.52384 | TGGGTATGAAAAAAA GACGCTCT GAAA AGAACGTC TGGAAATAGAAAAGG TERM 2543 2321228 - 2321206 - R 70 -4.9 -4.78848 | gap 1 TCTGGAAATAGAAAA GGAACGC-CA AAAG TGTACGTTCC ATAGTCTATATAAGT hydD 2322505 - 2321693 - | putative hydrolase hydR 2323160 - 2322531 - | TetR family transcriptional regulator TERM 2544 2323173 - 2323191 + r 78 -4.6 -5.56673 | opp_overlap 2323177, overlap 2323177 CATATTCCCCTCCTA AAAACAGA CTG TCTGTTTG TTTTTTATTATACAT TERM 2545 2323187 - 2323177 - R 71 -5.4 -4.56597 | opp_overlap 2323173 2323177 TTCCCCTCCTAAAAA CAGA CTG TCTG TTTGTTTTTTATTAT TERM 2546 2323177 - 2323187 + r 78 -5.4 -5.22768 | opp_overlap 2323177, overlap 2323173 TTCCCCTCCTAAAAA CAGA CTG TCTG TTTGTTTTTTATTAT ilvD 2325159 - 2323504 - | dihydroxy-acid dehydratase CD2015 2326042 - 2326722 + | hypothetical protein TERM 2547 2326768 - 2326806 + T 73 -9 -2.78813 | opp_overlap 2326767 2326764 2326772 2326797, overlap 2326767 2326772 ATATTTACAAATATG TAAAGCCCTCTTTCAT ACTACAA AAGAAAGTGGGCTTTA GTTATTAAACTAAAA CD2016 2327089 - 2326832 - | hypothetical protein TERM 2548 2327531 - 2327490 - H 73 -7.7 -3.73224 | gap 1, opp_overlap 2327486 2327490 CCACCTCTCATCAAA TTACCATTTGTATAATTCAT ATT ATACAT-ATACAAATGGTAA TTTTCAATATATTTT CD2017 2327638 - 2328009 + | putative phage regulatory protein TERM 2549 2327998 - 2328017 + T 100 -9.4 -5.38054 | opp_overlap 2327998 2328001 AAAAGATTCCTTAAA GAAGAGAA TTAA TTCTCTTC TTTTTCTTTATACAA TERM 2550 2328017 - 2327998 - T 83 -9.4 -3.58731 | opp_overlap 2327998, overlap 2328001 AAAAGATTCCTTAAA GAAGAGAA TTAA TTCTCTTC TTTTTCTTTATACAA TERM 2551 2328406 - 2328418 + T 70 -3.5 -5.29782 | overlap 2328411 ATTTTTTAGGATGAT TTTTA TTA TAAAA TTTTTTATAAATATA TERM 2552 2328423 - 2328436 + T 76 -2.5 -5.90231 | overlap 2328411 2328426 TTATTATAAAATTTT TTATA AATA TATAA TTTTTTTATATTTAT CD2018 2329706 - 2328810 - | AraC family transcription regulator CD2019 2329848 - 2331275 + | transporter TERM 2553 2331356 - 2331400 + T 100 -8.8 -5.011 | opp_overlap 2331359, overlap 2331359 ATAGTTTATAAATAA AAATCAGCTGAGCAAAATAT TTAGT ATATTATGCTCAACTGATTC TTTTATTATTTAACT TERM 2554 2331397 - 2331359 - T 100 -12.7 -5.38054 | opp_overlap 2331359 2331356 GTTTATAAATAAAAA TCAGCTGAGCAAAATAT TTAGT ATATTATGCTCAACTGA TTCTTTTATTATTTA TERM 2555 2331359 - 2331397 + T 100 -10.5 -4.57912 | opp_overlap 2331359, overlap 2331356 GTTTATAAATAAAAA TCAGCTGAGCAAAATAT TTAGT ATATTATGCTCAACTGA TTCTTTTATTATTTA clpB 2334000 - 2331406 - | chaperone CD2021 2334633 - 2334037 - | hypothetical protein CD2022 2335054 - 2334650 - | hypothetical protein TERM 2556 2335170 - 2335186 + H 75 -8.1 -3.50103 | overlap 2335169 ATAAGTAAACTTTTA TTTAGCT ATA AGCTAAA CTTTATTATTTTTTT CD2023 2335421 - 2335795 + | GntR family transcriptional regulator CD2024 2335792 - 2336655 + | ABC transporter, ATP-binding protein CD2025 2336655 - 2337293 + | putative ABC transporter, permease protein TERM 2557 2337331 - 2337365 + F 87 -6.7 -5.37865 | opp_overlap 2337322, overlap 2337336 ATTTAAGTATTTAAA TAAAATACTATCGAG TTTAT TTTGGTAGTATTTTA TTTTTTAATTATTAA CD2026 2337785 - 2338198 + | putative acetyltransferase TERM 2558 2339293 - 2339276 - g 71 -5.7 -4.386 | overlap 2339290 2339292 TAATTCTGTAGAAAA GATATTT AATG AAATATC ACATATATGTGAAAA CD2027 2338389 - 2339606 + | N-carbamoyl-L-amino acid hydrolase racX 2339768 - 2340466 + | amino acid racemase TERM 2559 2340539 - 2340494 - T 87 -6.6 -5.34555 | opp_overlap 2340491 2340496 2340498 CTATATTATAAAAAA TATATGTTATAAGTTTAT TTTAAATAGT ATAGACTTATAACATATA TCATAGTTTCTTGAC TERM 2560 2340496 - 2340537 + T 73 -9.1 -2.91869 | opp_overlap 2340494, overlap 2340491 2340498 ATATTATAAAAAATA TATGTTATAAGTTTATTTT AAAT AGTATAGACTTATAACATA TATCATAGTTTCTTG TERM 2561 2340615 - 2340596 - T 100 -10.8 -5.16841 | opp_overlap 2340596 TTATATTAATAAAAA GGATACCA AAAA TGGTATCC TTCATAAATATTTAT TERM 2562 2340596 - 2340615 + T 87 -10.8 -3.2404 | opp_overlap 2340596 TTATATTAATAAAAA GGATACCA AAAA TGGTATCC TTCATAAATATTTAT TERM 2563 2340628 - 2340657 + T 75 -6.7 -4.41302 | opp_overlap 2340627, overlap 2340620 TCCTTCATAAATATT TATATGTTTATTT ATAA AAATAATCATATA TTTATTACTTTACTA CD2029 2341303 - 2340686 - | putative lipoprotein TERM 2564 2341071 - 2341091 + g 78 -9.9 -3.0806 | ATTTTAGATGCATTC TGTTTTAGA TAA TCTAAAACA TATTGGGCATTTGGG argF 2342452 - 2341430 - | ornithine carbamoyltransferase argM 2343748 - 2342561 - | succinylornithine transaminase TERM 2565 2343549 - 2343563 + g 82 -8.6 -4.02051 | overlap 2343555 AATAATTTATCTACT TGCTCT TTT AGAGCA TTCTTTAAATTACTA argB 2344638 - 2343778 - | acetylglutamate kinase argJ 2345870 - 2344653 - | arginine biosynthesis bifunctional protein ArgJ argC 2346945 - 2345911 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 2566 2347085 - 2347059 - R 100 -11 -5.85244 | AATTAAAACAAAAAA CCCCTTAGCATT ATA AATACTAAGAGG CGATTTTCCGCGGTA TERM 2567 2347207 - 2347183 - R 100 -15.1 -5.46698 | TTTAAAATTAAAAAA GCCTCTTGGTC AAA GACCAAGAGAC GAATATACACCCGCG CD2035 2348806 - 2347715 - | hypothetical protein TERM 2568 2348171 - 2348186 + g 71 -4.8 -4.73448 | CGCTTTTGCTTCTGC TAAAAG ATAA CTTTTA TTTTTAGGTATCTGT CD2036 2350212 - 2348821 - | putative peptidylarginine deiminase TERM 2569 2349667 - 2349655 - G 80 -2 -5.74122 | opp_overlap 2349655 2349659 2349663 CACCATAGAAAAAAA TTCT TCGTC AGAA ATTCCTTTCGCACGA TERM 2570 2349972 - 2349957 - G 72 -5.4 -4.72272 | overlap 2349959 CGTTTTCATCAAAAA TAGGGT GCAT ACCCCA ATCACGAACCCATGG CD2037 2350770 - 2350231 - | putative acetyltransferase CD2038 2352116 - 2350791 - | putative drug/sodium antiporter CD2039 2352736 - 2352113 - | hypothetical protein CD2040 2352828 - 2353637 + | MerR family transcriptional regulator TERM 2571 2353648 - 2353684 + F 95 -8.1 -5.24989 | opp_overlap 2353649, overlap 2353649 TTTGAAAATATAAAA AGCGTGTATATCTCA AATCACA TGAGAAATACACGCC TTTTTTAATATCTCG TERM 2572 2353649 - 2353683 + F 95 -11.6 -3.73909 | opp_overlap 2353649, overlap 2353648 TTGAAAATATAAAAA GCGTGTATATCTCA AATCACA TGAGAAATACACGC CTTTTTTAATATCTC TERM 2573 2353683 - 2353649 - f 100 -11.6 -5.28983 | opp_overlap 2353649 2353648 TTGAAAATATAAAAA GCGTGTATATCTCA AATCACA TGAGAAATACACGC CTTTTTTAATATCTC TERM 2574 2353930 - 2353912 - f 87 -10.3 -3.16437 | opp_overlap 2353912 TATAAAATCTTAACA TGGAGGC TTTAT GCCTCCA TTTCTTTTGTAGTTG TERM 2575 2353912 - 2353930 + F 100 -10.3 -4.82863 | opp_overlap 2353912 TATAAAATCTTAACA TGGAGGC TTTAT GCCTCCA TTTCTTTTGTAGTTG CD2041 2354071 - 2354433 + | putative regulatory protein CD2042 2355340 - 2354783 - | putative transcriptional regulator TERM 2576 2355215 - 2355195 - G 70 -5.5 -4.32951 | opp_overlap 2355195 ACTTCAAGTAATAAA TCATCTAGA CTT TCTATATGA TTGTACAAAGATGGT TERM 2577 2355465 - 2355522 + H 100 -15.6 -3.68024 | opp_overlap 2355465 2355475, overlap 2355477 2355496 ACAGTTTAATTATAA TTTAATATAATACTAATTGAATTAGT TTTAAT ACTAATATAATTAGTATTATATTAAA TTCTATATTACAACA TERM 2578 2355522 - 2355465 - H 100 -13.4 -3.52093 | opp_overlap 2355465 2355477 2355496, overlap 2355475 ACAGTTTAATTATAA TTTAATATAATACTAATTGAATTAGT TTTAAT ACTAATATAATTAGTATTATATTAAA TTCTATATTACAACA CD2043 2355598 - 2356296 + | putative hydrolase TERM 2579 2356323 - 2356301 - f 79 -3.6 -5.65927 | opp_overlap 2356301 2356304 2356312, overlap 2356312 TAGTTAAATAAAAAA TAATTATATT ATT AATATGATTA AATTATTTATAAATG TERM 2580 2356489 - 2356466 - f 72 -3.8 -5.39721 | opp_overlap 2356466 2356464 TTATTATAGAAAAAA GAGGGATATA ATAT TGTCTCCCTC TCTTTCTTCTGTAAT CD2044 2357319 - 2357786 + | hypothetical protein CD2045 2357797 - 2358012 + | putative transcriptional regulator TERM 2581 2358006 - 2358044 + T 76 -9.3 -2.76198 | gap 1, opp_overlap 2358007 2358017, overlap 2358017 TGTAGAAGATGAAAA TGATTAAAAAAGAGTGTT TAGA AACACTCTTTTTTA-TTA TACTATATGATTTTT TERM 2582 2358044 - 2358007 - T 75 -8.7 -3.27271 | opp_overlap 2358006 2358017, overlap 2358017 GTAGAAGATGAAAAT GATTAAAAAAGAGTGTT TAGA AACACTCTTTTTTATTA TACTATATGATTTTT TERM 2583 2358017 - 2358034 + T 100 -8.5 -5.58179 | opp_overlap 2358007 2358017, overlap 2358006 AAAATGATTAAAAAA GAGTGTT TAGA AACACTC TTTTTTATTATACTA TERM 2584 2358034 - 2358017 - T 95 -8.5 -5.25656 | opp_overlap 2358017 2358006, overlap 2358007 AAAATGATTAAAAAA GAGTGTT TAGA AACACTC TTTTTTATTATACTA TERM 2585 2358725 - 2358700 - T 74 -8.4 -3.40674 | opp_overlap 2358699 2358700, overlap 2358699 TTAGTATTTAAAAAG GGTAACAACT CTCTCT AGCTGTTACC TCATATATTTATCTA CD2046 2359076 - 2358783 - | hypothetical protein TERM 2586 2359286 - 2359261 - R 90 -5.6 -5.97979 | opp_overlap 2359261 2359264 ACAACAATAAAAAAA TAATAGCTAT ATAAAA ATAGCTACTA TCTTTTTATTAATTA CD2047 2360194 - 2359514 - | putative two-component response regulator TERM 2587 2361296 - 2361258 - R 79 -8.5 -4.0371 | gap 1, opp_overlap 2361282, overlap 2361266 TATTGTTTAGAGAAA TAAAAAAAGCACTCTCCA TGAA TGGA-AATGCTTTCTTTA ATAAATTAGTTGACG TERM 2588 2361288 - 2361266 - R 83 -3.5 -6.04953 | gap 1, opp_overlap 2361282, overlap 2361258 AGAGAAATAAAAAAA GCACTCTCCA TGAA TGGA-AATGC TTTCTTTAATAAATT TERM 2589 2361315 - 2361341 + r 95 -12.6 -3.71913 | opp_overlap 2361319, overlap 2361319 AATTAGTTGACGTAG TAAAGATGTATT CAG AATACATCTTTA TGTTTTGAGTCTCGA TERM 2590 2361337 - 2361319 - R 79 -9 -3.76402 | opp_overlap 2361315 2361319 AGTTGACGTAGTAAA GATGTATT CAG AATACATC TTTATGTTTTGAGTC TERM 2591 2361319 - 2361337 + r 86 -9 -4.46775 | opp_overlap 2361319, overlap 2361315 AGTTGACGTAGTAAA GATGTATT CAG AATACATC TTTATGTTTTGAGTC TERM 2592 2361420 - 2361450 + r 72 -8.5 -3.26319 | opp_overlap 2361420 2361423, overlap 2361423 TCGAGTATTTACTAA TAAGGCTATGA TTCTCAATT TCATAGCCTTA TTAATATACAAACTT TERM 2593 2361450 - 2361420 - R 72 -8.5 -3.19463 | opp_overlap 2361420 2361423, overlap 2361423 TCGAGTATTTACTAA TAAGGCTATGA TTCTCAATT TCATAGCCTTA TTAATATACAAACTT CD2048 2362337 - 2361465 - | transcriptional regulator TERM 2594 2362387 - 2362400 + r 70 -2.5 -5.51612 | overlap 2362395 TTTATTAACACTGTC TTTTT CTCT AAAAA TTTTATTTTTTATCT CD2049 2363309 - 2362731 - | hypothetical protein rluB 2364083 - 2363367 - | putative 23S RNA and tRNA pseudouridine synthase TERM 2595 2364651 - 2364639 - g 90 -4.9 -5.71712 | opp_overlap 2364639, overlap 2364650 TTTTATAGAAAAAAA TATGT CAA ACATA GATTTTCTAAAAACT CD2051 2364274 - 2365359 + | hypothetical protein TERM 2596 2365463 - 2365431 - T 80 -6.5 -5.02074 | opp_overlap 2365431 TTATTTCTCAAAAAA TATCTCTTAGTAA GAAAAAA TTGCTAAGAGATA TTTTTTATAATATAT TERM 2597 2365431 - 2365463 + T 100 -8.7 -5.35459 | opp_overlap 2365431 TTATTTCTCAAAAAA TATCTCTTAGTAA GAAAAAA TTGCTAAGAGATA TTTTTTATAATATAT CD2052 2366191 - 2365514 - | putative lipoprotein lysA 2367682 - 2366390 - | diaminopimelate decarboxylase TERM 2598 2367375 - 2367389 + g 75 -7.2 -4.14397 | opp_overlap 2367368 2367374 2367375 CCATGAAAGAAAACT TTTTCC ATA GGAAAA TTTGATTTATAAGCT lysC 2368893 - 2367700 - | aspartokinase TERM 2599 2368954 - 2368932 - R 100 -9.9 -5.38054 | opp_overlap 2368930 TTTGATAAATAAAAA CGCCCAAAG GTATA CTTTGGACG TGTAAATTTCATAGA CD2055 2369901 - 2369254 - | hypothetical protein TERM 2600 2369397 - 2369408 + g 74 -3 -5.40474 | TAAAAAATGGAATTG TAGA TTTA TCTA TTTTTTTAGAAAGAT TERM 2601 2369751 - 2369761 + g 88 -2.6 -6.19302 | opp_overlap 2369751, overlap 2369757 ACATTTTTCTCAAAG TTTT TTT AAAA TTTTTTTTATTGTAT TERM 2602 2370001 - 2369961 - R 100 -20.3 -5.19998 | opp_overlap 2369954 2369968 AGAATTAAAATAAAA TAGCTAATTTTTATAGAAT TAA ATTCTATAAAAATTAGCTA TCACTATGTTAAATA TERM 2603 2369968 - 2369994 + r 90 -11.2 -3.14026 | opp_overlap 2369961, overlap 2369954 AAATAAAATAGCTAA TTTTTATAGAAT TAA ATTCTATAAAAA TTAGCTATCACTATG CD2056 2371741 - 2370041 - | hypothetical protein TERM 2604 2371819 - 2371801 - R 70 -3.3 -5.29782 | opp_overlap 2371801 TATATTTACAAAAAA TAAATAT TTATC ATATTTA TTATATATTAAGATA TERM 2605 2371926 - 2371947 + r 83 -7.9 -4.67556 | TGTTTGTGCTATCCA TCCCGCACC TAAA GGAGTGGGA TTTTTGCACTATTCT CD2057 2372704 - 2372138 - | hypothetical protein CD2058 2373573 - 2372860 - | hypothetical protein TERM 2606 2374478 - 2374496 + G 74 -6.8 -4.30844 | opp_overlap 2374468 CAGGAGATAAATGGT GCATATAT CCT ATGTATGC TTTTGCTCATCCAAT glnS 2373865 - 2375529 + | glutaminyl-tRNA synthetase CD2060 2376535 - 2375636 - | putative lipid kinase TERM 2607 2376277 - 2376288 + g 72 -4.4 -5.06505 | opp_overlap 2376277 TTCCTGTAGGCAAAA TTCC AATT GGAA TTTTTATGTCTAATT CD2061 2377200 - 2376562 - | hypothetical protein TERM 2608 2376719 - 2376740 + g 85 -4.5 -5.51353 | gap 1, opp_overlap 2376723, overlap 2376723 2376725 GTACTTAATCTTTTA CAATTGGCTG GAG CAGCTA-TTG TTTTTGTTCTTTTTA TERM 2609 2376723 - 2376737 + g 78 -6.4 -4.74161 | opp_overlap 2376723, overlap 2376719 2376725 TTAATCTTTTACAAT TGGCTG GAG CAGCTA TTGTTTTTGTTCTTT TERM 2610 2376725 - 2376735 + g 71 -6.8 -3.93092 | opp_overlap 2376723, overlap 2376723 2376719 AATCTTTTACAATTG GCTG GAG CAGC TATTGTTTTTGTTCT TERM 2611 2377380 - 2377353 - R 100 -8.6 -5.28481 | opp_overlap 2377353 2377352 2377350 TACTCAATCAAAAAA GGAAAGTAGA TGTACTAT TCTACTTTCC CTATATTGTATGTAG CD2062 2378535 - 2377537 - | hypothetical protein CD2063 2379208 - 2378633 - | hypothetical protein CD2064 2379515 - 2379787 + | hypothetical protein TERM 2612 2379784 - 2379834 + T 79 -8.7 -3.81089 | opp_overlap 2379788 2379800, overlap 2379791 2379800 2379826 2379828 AACTCATACTCTGTA TTAATCAAATAAAAAAGTTCCTA AAAAC TAGGAACTTTTTTATATTAATAA TTATTAATATATCTC TERM 2613 2379831 - 2379788 - T 87 -10.8 -3.15249 | gap 1, opp_overlap 2379784 2379791 2379800 2379826 2379828, overlap 2379800 CATACTCTGTATTAA TCAA-ATAAAAAAGTTCCTAA AAA CTAGGAACTTTTTTATATTAA TAATTATTAATATAT TERM 2614 2379791 - 2379827 + T 93 -11.2 -3.33573 | opp_overlap 2379788 2379800, overlap 2379784 2379800 2379826 ACTCTGTATTAATCA AATAAAAAAGTTCCTA AAAAC TAGGAACTTTTTTATA TTAATAATTATTAAT TERM 2615 2379800 - 2379818 + T 100 -7.5 -5.49569 | opp_overlap 2379788 2379800, overlap 2379791 2379784 TAATCAAATAAAAAA GTTCCTA AAAAC TAGGAAC TTTTTTATATTAATA TERM 2616 2379818 - 2379800 - T 100 -8.2 -5.72053 | opp_overlap 2379800 2379791 2379784, overlap 2379788 TAATCAAATAAAAAA GTTCCTAA AAA CTAGGAAC TTTTTTATATTAATA CD2065 2380601 - 2380224 - | putative regulatory protein CD2066 2380942 - 2382054 + | integrase TERM 2617 2382090 - 2382130 + T 72 -8.5 -3.20435 | overlap 2382091 AAATTAGCTTAGCTT ATTGAGATAGATTCATTAA TAT TAAATGTATCTATCTCAAA TTAATAACTACTTAA TERM 2618 2382091 - 2382129 + T 86 -12 -2.5194 | overlap 2382090 AATTAGCTTAGCTTA TTGAGATAGATTCATTAA TAT TAAATGTATCTATCTCAA ATTAATAACTACTTA TERM 2619 2382243 - 2382221 - T 88 -6.4 -5.55769 | CTTTACAATAAAAAA GATATTCCCT TAT AGAAAATATC TTTTTAAATACTATA CD2067 2382738 - 2382262 - | hypothetical protein CD2068 2384562 - 2382937 - | ABC transporter, ATP-binding protein TERM 2620 2384886 - 2384864 - R 71 -5.7 -4.70659 | opp_overlap 2384864 2384854 2384853 TTTCATATTTAAAAA GAGTACTTA ATTTG TAAATACTC TTTTTTAATAACTTT CD2069 2385919 - 2384900 - | putative molybdopterin biosynthesis protein CD2070 2386494 - 2385916 - | putative molybdopterin-guanine dinucleotide biosynthesis protein TERM 2621 2386407 - 2386391 - G 72 -8.1 -3.24411 | overlap 2386389 ACTTCTCTAAATACA TGTTCTA TTA TAGAACA GCCTTTATAATTTAA CD2071 2387314 - 2386592 - | hypothetical protein TERM 2622 2387098 - 2387130 + g 76 -9.4 -3.20633 | opp_overlap 2387098 2387116, overlap 2387116 TATAACTGCCACATA CTGTTATTCCAT GACAAATAG ATGGAATAACAG TTCCATCTATTGTAA TERM 2623 2387130 - 2387098 - G 75 -9.4 -2.90219 | opp_overlap 2387098 2387116, overlap 2387116 TATAACTGCCACATA CTGTTATTCCAT GACAAATAG ATGGAATAACAG TTCCATCTATTGTAA TERM 2624 2387139 - 2387116 - G 79 -8.3 -3.9712 | opp_overlap 2387098 2387116, overlap 2387098 TTATTCCATGACAAA TAGATGGAA TAACAG TTCCATCTA TTGTAATAATTATAT TERM 2625 2387116 - 2387139 + g 76 -9 -3.49086 | opp_overlap 2387098 2387116, overlap 2387098 TTATTCCATGACAAA TAGATGGAAT AACA GTTCCATCTA TTGTAATAATTATAT TERM 2626 2387452 - 2387436 - R 71 -6.5 -4.08557 | TGTTGTAAACAACAA GGCGGAT CCA ATTCGCC GCTAAGCTGTAAGCT CD2072 2388774 - 2387497 - | putative transposase TERM 2627 2388549 - 2388568 + g 70 -4.4 -4.90778 | gap 1 GCGCTATATTACTAT TGAGAAGCT TAT AG-TTCTCA TTTTCTTTGCATACA TERM 2628 2388804 - 2388850 + r 100 -11.2 -4.06905 | opp_overlap 2388798 2388808 2388810 TAGAATATACTCTAC TAGACATTATATACGGTATTTT TAC AAAACACCATATATAATGTCCA TTTAATTACTTTATT TERM 2629 2388846 - 2388808 - R 100 -15 -2.80622 | opp_overlap 2388804, overlap 2388798 2388810 ATATACTCTACTAGA CATTATATACGGTATTTT TAC AAAACACCATATATAATG TCCATTTAATTACTT TERM 2630 2388844 - 2388810 - R 90 -11.8 -2.94925 | opp_overlap 2388804, overlap 2388808 2388798 ATACTCTACTAGACA TTATATACGGTATTTT TAC AAAACACCATATATAA TGTCCATTTAATTAC xdhA1 2391219 - 2388913 - | xanthine dehydrogenase, molybdenum binding subunit TERM 2631 2390394 - 2390405 + g 70 -5.8 -4.30576 | TAAATACAAATTTTG CTGG TCTA CCAG TTTTCATAGTAACAA pucC1 2392006 - 2391212 - | putative FAD-binding subunit of xanthine dehydrogenase dehydrogenase TERM 2632 2391393 - 2391403 + g 70 -5.4 -4.66953 | TTACTCGCTTCAAGT GCTA ATC TAGC TTTTTGAGGTCTTGC pbuX 2393471 - 2392113 - | xanthine permease TERM 2633 2393141 - 2393110 - G 71 -9 -2.84955 | gap 1 ATAATTATTACTATA CCAGCTATTATTTGA GAG CCAAATAATA-CTGG TAGTCCATACTTACT CD2076 2395908 - 2394817 - | hypothetical protein TERM 2634 2396103 - 2396068 - R 90 -10 -3.71353 | gap 1, opp_overlap 2396068 2396075, overlap 2396075 AAATAAGGTCAACAA CAAAAAAGGCTTATCTC TTT GAGATA-GCCTTTCTTA TTTTTATTTAAAACT TERM 2635 2396068 - 2396103 + r 81 -5.6 -5.27938 | gap 1, opp_overlap 2396068 2396075, overlap 2396075 AAATAAGGTCAACAA CAAAAAAGGCTTATCTC TTT GAGATA-GCCTTTCTTA TTTTTATTTAAAACT TERM 2636 2396096 - 2396075 - R 100 -8.1 -5.64873 | gap 1, opp_overlap 2396068 2396075, overlap 2396068 GTCAACAACAAAAAA GGCTTATCTC TTT GAGATA-GCC TTTCTTATTTTTATT TERM 2637 2396075 - 2396096 + r 88 -8.1 -4.8245 | gap 1, opp_overlap 2396075 2396068, overlap 2396068 GTCAACAACAAAAAA GGCTTATCTC TTT GAGATA-GCC TTTCTTATTTTTATT pyrD 2397223 - 2396138 - | dihydroorotate dehydrogenase, catalytic subunit CD2078 2398572 - 2397259 - | putative amidohydrolase xdhA2 2400864 - 2398573 - | xanthine dehydrogenase, molybdenum binding subunit pucC2 2401648 - 2400854 - | putative FAD-binding subunit of xanthine dehydrogenase TERM 2638 2401024 - 2401038 + g 74 -5 -4.93316 | overlap 2401035 AACTTAATATTTCAC TTGCTT TAT AGGCAA TTTTTGCTCTTCTTG xdhC 2402154 - 2401687 - | xanthine dehydrogenase iron-sulfur binding subunit CD2082 2403629 - 2402205 - | amidohydrolase TERM 2639 2403007 - 2403017 + g 71 -6.8 -3.88577 | overlap 2403005 GACCATATTGCTGCA GGAG CTA CTCC TATTTTGATTCTTCC CD2083 2404999 - 2403629 - | D-hydantoinase TERM 2640 2405070 - 2405099 + r 75 -9.4 -2.56391 | opp_overlap 2405076, overlap 2405069 2405065 TTTAAAATTGTATTT TCTAAAGGTGCT ATATTC AGCACCTCTAGA CTATATTTAAATAAT TERM 2641 2405093 - 2405076 - R 72 -7.7 -3.55563 | opp_overlap 2405070 2405069 2405065 ATTGTATTTTCTAAA GGTGCTA TATT CAGCACC TCTAGACTATATTTA CD2084 2406319 - 2405132 - | peptidase dpaL1 2407660 - 2406446 - | diaminopropionate ammonia-lyase TERM 2642 2407964 - 2407992 + r 95 -10.5 -4.21343 | opp_overlap 2407964 AATTAAAACATAAAA TAGTGATGCAATA ATC TATTACATCACTA TTTGTATATATTCAA TERM 2643 2407992 - 2407964 - R 100 -12.7 -4.93333 | opp_overlap 2407964 AATTAAAACATAAAA TAGTGATGCAATA ATC TATTACATCACTA TTTGTATATATTCAA CD2086 2408694 - 2408023 - | putative iron-sulfur flavoprotein TERM 2644 2408595 - 2408609 + g 75 -7.2 -4.17537 | ACCAATACTCAGTTT CTATAC CAG GTATAG TTTCTGCTTCTTTCA CD2087 2410993 - 2408777 - | putative xanthine dehydrogenase TERM 2645 2409706 - 2409718 + g 89 -4.1 -5.83211 | TTAAATATTTTCCTT CTTCT TTT GGAAG TTTTTTCTTTTCATC TERM 2646 2410421 - 2410398 - G 73 -8.3 -3.44794 | opp_overlap 2410397 AATTTATCATTATAA TCATAGTGT GCAATT ACACTATGA GTCTCTATTGCACTA cutS 2411466 - 2410996 - | putative carbon monoxide dehydrogenase,iron-sulfur-binding subunit TERM 2647 2411441 - 2411451 + g 72 -2.6 -5.43553 | opp_overlap 2411441 TCATACATGTAATCA TTAA TAT TTAA TTTTATTTTTTCCAT CD2089 2412949 - 2411528 - | amidohydrolase CD2090 2414356 - 2412995 - | putative xanthine/uracile permease TERM 2648 2413617 - 2413597 - G 74 -8.5 -3.68827 | opp_overlap 2413600, overlap 2413600 TACCTATTATGTAAA TAATAGTAA ACA TTACTATTA ACTCTGGTCTAAATT CD2091 2416017 - 2414653 - | putative xanthine/uracile permease TERM 2649 2414749 - 2414734 - G 74 -7.6 -3.70676 | opp_overlap 2414734 2414733 TAGATTTAAAACGAA TGCAAC CAAT GTTGCA ATTACTATTGGAGAT TERM 2650 2416176 - 2416186 + r 70 -2.6 -5.57054 | TATTTGATAATTTAT TAAA GCA TTTA TTTTTTTAAATTCTT TERM 2651 2416191 - 2416206 + r 90 -3.4 -6.4275 | TAAAGCATTTATTTT TTTAAA TTCT TTTAAA TTTTTTTTATTTTTG TERM 2652 2416274 - 2416250 - R 100 -10.9 -5.74122 | opp_overlap 2416250 TATTACACAAAAAAA CACTTAGAAAA TAG TTTTCCAAGTG TTTTTTATCAATTTT TERM 2653 2416250 - 2416274 + r 100 -8.7 -5.35222 | opp_overlap 2416250 TATTACACAAAAAAA CACTTAGAAAA TAG TTTTCCAAGTG TTTTTTATCAATTTT CD2092 2417371 - 2416331 - | putative sigma-54-dependent transcriptional regulator CD2093 2418966 - 2417698 - | hypothetical protein CD2094 2420899 - 2418959 - | putative restriction enzyme CD2095 2421644 - 2420922 - | hypothetical protein CD2096 2422680 - 2421694 - | hypothetical protein TERM 2654 2422241 - 2422218 - G 74 -6.8 -4.28656 | ACTTAATATTTAAAA TTAGAGATTC TGAA GAAGCTCTAA AAAACTCAGTTACAT CD2097 2423237 - 2422737 - | hypothetical protein TERM 2655 2423504 - 2423486 - R 90 -7.4 -5.38348 | opp_overlap 2423484 2423488 2423497, overlap 2423497 AAAAACAGCAAAAAA GAGCCTTA AAA TTAGGCTC TAATAATTTATTTTA CD2098 2423834 - 2423523 - | hypothetical protein TERM 2656 2423678 - 2423702 + g 86 -7.3 -5.27335 | AAATTTCCTCTTCTG CAAAATCAATT TCT ATTTGATTTTG TTTTTCTTTAAAAAA CD2099 2426238 - 2423974 - | putative molybdenum-binding subunit of oxidoreductase CD2100 2426691 - 2426242 - | putative [2Fe-2S]-binding subunit of oxidoreductase CD2101 2427479 - 2426691 - | putative FAD-binding subunit of oxidoreductase TERM 2657 2426980 - 2426994 + g 71 -5.8 -4.42743 | TTTCTAAGTGATTTA TAAGAA GCA TTCTTA TTTGTCTTCTTTATG TERM 2658 2427645 - 2427603 - R 82 -4.5 -5.76633 | gap 1 TTATACATAAAAAAA TGACTATTTCAATAATCATC ATTA GACAAT-ATTAAAATAGCCA TTAACAGGTACTATT CD2102 2428978 - 2427674 - | putative Na(+)/H(+) antiporter TERM 2659 2428962 - 2428978 + g 70 -8.1 -3.0914 | overlap 2428961 2428976 GTCTCTCCTCCCGAT TTGCATA CAT TATGCAA TATACTTATTGTTTT CD2103 2430675 - 2429593 - | putative ABC transporter, permease protein CD2104 2432373 - 2430778 - | putative ABC transporter, permease protein CD2105 2433127 - 2432420 - | ABC transporter, ATP-binding protein TERM 2660 2433188 - 2433147 - H 100 -14.3 -2.85351 | gap 1, opp_overlap 2433140 2433142 2433141 TCCCTCCATATTATA GTTTTGATATTTGTTATATA TAA TATATAACAAATATCAAA-C AATTACAACTTTTAT CD2106 2433380 - 2434525 + | putative ATP-dependent RNA helicase TERM 2661 2434600 - 2434559 - T 100 -13.3 -4.91194 | opp_overlap 2434559 2434561 ACAACAAATACAAAA GAGCTGTAGTTTATCATCA CAAT TGATAATAAATTACAGCCC TTTATTTTATATTAA TERM 2662 2434559 - 2434600 + T 100 -11.1 -4.88163 | opp_overlap 2434559, overlap 2434561 ACAACAAATACAAAA GAGCTGTAGTTTATCATCA CAAT TGATAATAAATTACAGCCC TTTATTTTATATTAA TERM 2663 2434561 - 2434598 + T 88 -12.3 -2.69136 | opp_overlap 2434559, overlap 2434559 AACAAATACAAAAGA GCTGTAGTTTATCATCA CAAT TGATAATAAATTACAGC CCTTTATTTTATATT CD2107 2436015 - 2434639 - | putative xanthine/uracil permease TERM 2664 2436116 - 2436087 - H 77 -8.9 -3.30124 | opp_overlap 2436084, overlap 2436101 CCGTATCCTTCATAA TTCAGTTAATTAA ATAT TTAATTAACTAAA TAATAGTATACATAG CD2108 2436461 - 2437807 + | putative drug/sodium antiporter TERM 2665 2438582 - 2438572 - g 70 -4 -5.00616 | TTTGTCTTTAAAAAA GAAT TGC ATTC AATAAAATTTATTTC CD2109 2437885 - 2439279 + | putative sodium:sulfate symporter TERM 2666 2439345 - 2439330 - T 70 -4.8 -4.84363 | opp_overlap 2439330 TGAAATTATTAAAAA GAAAAT TCAT ATTTTC ATCTTTTTATATAAG fsaB 2440075 - 2439401 - | fructose-6-phosphate aldolase 2 TERM 2667 2440713 - 2440700 - g 86 -5.3 -5.59655 | GAAAGTAATAAAAAA GTAAC ACTT GTTAC AAATATGCTGGATAT CD2111 2440349 - 2441113 + | DeoR family transcriptional regulator TERM 2668 2441279 - 2441329 + T 85 -10.8 -3.08187 | opp_overlap 2441277 2441284 2441320, overlap 2441259 2441284 2441320 TTTATAAAACTAATT TGAAATAGACTTTCTAAATCTAAT ACA GTTATTTTTAGAAAGTCTATTTCC TTAAATAAACTATTT TERM 2669 2441324 - 2441284 - T 76 -8.6 -3.71108 | opp_overlap 2441259 2441284 2441279 2441320, overlap 2441277 2441320 AAAACTAATTTGAAA TAGACTTTCTAAATCTAA TACAG TTATTTTTAGAAAGTCTA TTTCCTTAAATAAAC TERM 2670 2441284 - 2441324 + T 86 -9.3 -3.93288 | opp_overlap 2441277 2441284 2441320, overlap 2441259 2441279 2441320 AAAACTAATTTGAAA TAGACTTTCTAAATCTAAT ACA GTTATTTTTAGAAAGTCTA TTTCCTTAAATAAAC CD2112 2441701 - 2441402 - | hypothetical protein TERM 2671 2441821 - 2441789 - R 100 -8.6 -5.46706 | opp_overlap 2441789 ATTTCAAAATAAAAA TAACACTAAGCATA GATTA TATGCTCGGTGTTA TTTTTTAAATTCATA TERM 2672 2441789 - 2441821 + r 95 -8.6 -5.17576 | opp_overlap 2441789 ATTTCAAAATAAAAA TAACACTAAGCATA GATTA TATGCTCGGTGTTA TTTTTTAAATTCATA TERM 2673 2441954 - 2441964 + r 75 -4 -5.4588 | TTTATATAATACAGT TTCA TTA TGAA TTTTTTGTGATTTTA CD2113 2443301 - 2442024 - | two-component sensor histidine kinase TERM 2674 2442053 - 2442066 + g 74 -3.1 -5.34555 | overlap 2442041 2442045 CTACTGTGAATACTA CAGAG TTTT CTTTG TTTTTTATGCTATAA TERM 2675 2442147 - 2442158 + g 75 -4.4 -5.1764 | ACTTCCTCCAGTTTT TCTC GAAC GAGA TTTTTCTATTCTATA TERM 2676 2442404 - 2442418 + g 71 -5.8 -4.50259 | TTTCCAAATTTTCTT CTATTT TTA AAATAG TTTTCATATGTTTTT CD2114 2443953 - 2443285 - | two-component system response regulator TERM 2677 2443586 - 2443566 - G 73 -5.6 -4.59853 | opp_overlap 2443566 2443564 TTAATTTTTCAAAAA CTATAAAT TTGTC ATTTATAG TCTTGTTACTTCGCC CD2115 2446614 - 2444113 - | putative copper-transporting P-type ATPase TERM 2678 2444285 - 2444298 + g 70 -3.9 -5.08086 | TTATATCCAAATGCC CAAAA TAGG TTTTG TTTTATATTTTTTAT TERM 2679 2444853 - 2444867 + g 70 -8.6 -2.66593 | overlap 2444850 2444850 TAATAGTAACTTGTA TACCAG CAC CTGGTA TGGCTTTAAAATTAT TERM 2680 2446831 - 2446875 + H 100 -20.5 -4.58419 | opp_overlap 2446831 ATGTATATATAAAAA TAGAGCATCTAAATTGTTTAA TGC TTATACAATTTAGATGCTCTA TTTATTATATTTTAT TERM 2681 2446875 - 2446831 - H 100 -20.5 -5.04597 | opp_overlap 2446831 ATGTATATATAAAAA TAGAGCATCTAAATTGTTTAA TGC TTATACAATTTAGATGCTCTA TTTATTATATTTTAT TERM 2682 2447144 - 2447154 + H 75 -4 -5.58454 | opp_overlap 2447138 2447144 ATACCCAAATATAAA CTTT ATA AAAG TTTTTTTAATATAAA bipA 2447691 - 2449514 + | GTP-binding protein TERM 2683 2449589 - 2449538 - T 87 -9.9 -3.34895 | gap 1, opp_overlap 2449543, overlap 2449543 TTTACCTCTAATTAA CAAAATAGCCATATAGTACTGAAA AATTA TTTCAGTT-TATATGGCTATTTTT ATTTGAAATTTATAT TERM 2684 2449584 - 2449543 - T 100 -9.8 -4.78572 | gap 1, opp_overlap 2449543, overlap 2449538 CTCTAATTAACAAAA TAGCCATATAGTACTGAAA AATTA TTTCAGTT-TATATGGCTA TTTTTATTTGAAATT TERM 2685 2449543 - 2449584 + T 100 -12 -5.29846 | gap 1, opp_overlap 2449543 2449538 CTCTAATTAACAAAA TAGCCATATAGTACTGAAA AATTA TTTCAGT-TTATATGGCTA TTTTTATTTGAAATT trxB2 2450512 - 2449604 - | thioredoxin reductase TERM 2686 2450681 - 2450652 - H 100 -8.1 -5.77988 | opp_overlap 2450652 ATATATATAAAAAAA CTGCAAATAAAAA TTAA CTTTTATTTACAG TTCTCACTTATTTAT TERM 2687 2451041 - 2451051 + H 79 -4 -5.69473 | opp_overlap 2451041 ATTTTTCAAATTAAA GTTT TGT AAAC TTTTTTTGTAATATA TERM 2688 2451530 - 2451560 + H 100 -10.5 -5.8187 | opp_overlap 2451530 2451533, overlap 2451521 GAACCGCGGGAAACA GATTCTCGTCCCT TTTTT AGGGATGAGGGTC TTTTTTTATTACCTA thrC 2451653 - 2453134 + | threonine synthase TERM 2689 2453366 - 2453355 - g 78 -4.4 -5.42265 | TTAAACCAGAAAAAA TACC TGCT GGTA TCAAAATAAAAATCC thrB 2453135 - 2454037 + | homoserine kinase TERM 2690 2454098 - 2454134 + F 72 -7.5 -3.62518 | opp_overlap 2454098, overlap 2454101 GTAGTATAATAATTA GGACTAGGTAATAATAT TAA GTATTATAATCTAGTTC TTTAAACATGTTTAC TERM 2691 2454782 - 2454798 + G 70 -8.7 -2.67705 | opp_overlap 2454769 2454780 2454782, overlap 2454768 2454792 TTTGGTAGAAACATA CCAGTAG TTG CTGCTGG TGGTATAACTTCTAG CD2120 2454164 - 2455222 + | putative 2-nitropropane dioxygenase CD2121 2455889 - 2455377 - | hypothetical protein TERM 2692 2456728 - 2456712 - g 76 -9.5 -3.06969 | GAAGCTATTGTAACA GTTTGTG ATG CACAAAC TAAGATTTTAAATGA CD2122 2456409 - 2457344 + | putative cations transporter TERM 2693 2457404 - 2457353 - T 75 -8.4 -3.58428 | opp_overlap 2457353 2457360, overlap 2457360 ATTATAAAATATTAA TAAAAAAGCCATTAGAATTAAT TGATTTAC ATTTATCCTAATGGCTTTTATA TATTTAAATCTATAT TERM 2694 2457397 - 2457360 - T 88 -6.5 -5.54885 | opp_overlap 2457360 2457353, overlap 2457353 AATATTAATAAAAAA GCCATTAGAATTAAT TGATTTAC ATTTATCCTAATGGC TTTTATATATTTAAA CD2123 2459307 - 2457436 - | putative multiprotein-complex assembly protein TERM 2695 2458291 - 2458271 - G 72 -6.1 -4.27117 | opp_overlap 2458271 TTCTGATAATATAAA TCCCCTAGA TTT TCAAGGGAA CTTTTGCATCCAACA TERM 2696 2458848 - 2458838 - G 70 -4 -5.00616 | TCTTTCTCCAAAAAA GTAT ATA ATAC CCCTAAATTAAAACA TERM 2697 2460350 - 2460360 + G 76 -5.4 -5.0133 | overlap 2460358 ATATAACACTAGCTT CACA ATG TGTG TTTTTTACAACACTA CD2124 2459497 - 2460423 + | putative transporter TERM 2698 2460741 - 2460799 + T 100 -14.4 -3.16651 | opp_overlap 2460741 2460744 2460750, overlap 2460744 2460750 2460759 TTTTAACACAATAGA GAAGTAAAATAGATTATCTTTAATGTAA ATT TTTTATTAAAGACACTCTATTTTACTTC TCTATTAGCTTATTT TERM 2699 2460799 - 2460741 - T 100 -14.4 -3.27382 | opp_overlap 2460741 2460744 2460750 2460759, overlap 2460744 2460750 TTTTAACACAATAGA GAAGTAAAATAGATTATCTTTAATGTAA ATT TTTTATTAAAGACACTCTATTTTACTTC TCTATTAGCTTATTT TERM 2700 2460744 - 2460796 + T 91 -10.3 -3.70553 | opp_overlap 2460741 2460744 2460750, overlap 2460741 2460750 2460759 TAACACAATAGAGAA GTAAAATAGATTATCTTTAATGTAA ATT TTTTATTAAAGACACTCTATTTTAC TTCTCTATTAGCTTA TERM 2701 2460796 - 2460744 - T 91 -10.3 -3.76582 | opp_overlap 2460744 2460741 2460750 2460759, overlap 2460741 2460750 TAACACAATAGAGAA GTAAAATAGATTATCTTTAATGTAA ATT TTTTATTAAAGACACTCTATTTTAC TTCTCTATTAGCTTA CD2125 2461358 - 2460813 - | putative acetyltransferase TERM 2702 2461205 - 2461189 - G 79 -9.5 -3.53444 | opp_overlap 2461189 2461188 2461187 2461192, overlap 2461192 TCATTTTCTCCCAAA GAAGCTA ACA TAGCTTC AGTTTTATCGACTCT TERM 2703 2461189 - 2461205 + g 73 -9.5 -2.54186 | opp_overlap 2461189 2461192, overlap 2461188 2461187 2461192 TCATTTTCTCCCAAA GAAGCTA ACA TAGCTTC AGTTTTATCGACTCT CD2126 2461811 - 2462935 + | hypothetical protein TERM 2704 2462965 - 2462985 + T 100 -9.8 -4.80455 | opp_overlap 2462965 2462967 AATTTTATTCATATA CAGCTGAT ATTAA ATCAGCTG TTTTCTATTTAAATA TERM 2705 2462985 - 2462965 - T 80 -9.8 -2.9176 | opp_overlap 2462965, overlap 2462967 AATTTTATTCATATA CAGCTGAT ATTAA ATCAGCTG TTTTCTATTTAAATA TERM 2706 2463249 - 2463273 + T 89 -10.1 -3.55842 | opp_overlap 2463249 ATTCAAAATAAAAAA GCATGTATCAA AAC TTGACACATGC TTATAATCTTATGTA TERM 2707 2463273 - 2463249 - T 100 -12.3 -5.80951 | opp_overlap 2463249 ATTCAAAATAAAAAA GCATGTATCAA AAC TTGACACATGC TTATAATCTTATGTA CD2127 2464233 - 2463409 - | hypothetical protein ispG 2465636 - 2464581 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2708 2464909 - 2464934 + g 78 -9.1 -3.22951 | opp_overlap 2464908 2464907, overlap 2464907 2464925 TTACCAACAATAACC TCTTCAACAGG GTCG CCTGTTAAAGA TATTCTAACAGTATC TERM 2709 2465233 - 2465216 - G 75 -7.1 -4.09243 | opp_overlap 2465215 CATACTTTTTTAAAA GTTCTTT CTCT AAAGAAC CTCCATTAACTCCAA CD2129 2466823 - 2465819 - | putative membrane-associated protease dxr 2467990 - 2466836 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CD2132 2468357 - 2468154 - | putative regulatory protein TERM 2710 2468453 - 2468408 - H 71 -6.5 -4.09864 | opp_overlap 2468401 2468414 ATCTATTTTGGAAAA TTTTCATCTATTTAGATAAAT AATT ATTTATCTAAATAGATTTCAA TTATAGTTTATTAAA TERM 2711 2468414 - 2468447 + H 100 -14.3 -3.83756 | opp_overlap 2468408 TTTGGAAAATTTTCA TCTATTTAGATAAAT AATT ATTTATCTAAATAGA TTTCAATTATAGTTT TERM 2712 2469250 - 2469233 - g 85 -5.7 -5.39221 | AGAACAATCAAAAAA TATAGAA GAAT TTCTATA TAAGTACAAAAAACG CD2133 2468694 - 2469275 + | hypothetical protein TERM 2713 2469340 - 2469300 - T 100 -12.2 -4.02733 | opp_overlap 2469304 TAAAATACATAACAA TACATTGAGTCATTTAAC GAGAT ATAAAATGACTCAATGTA TAGACGATAAAAATA CD2134 2471209 - 2469362 - | putative signaling protein TERM 2714 2469831 - 2469816 - G 71 -4.8 -4.84017 | AACCTTTGATAAAAA CTATTT TGGT AAATAG TAACCCTTGAAAAAT TERM 2715 2470003 - 2469993 - G 71 -3.2 -5.24129 | TCTGGTGATAAAAAA CCAA GTT CTGG AGAAAACCATCTTAC TERM 2716 2470176 - 2470188 + g 79 -7.7 -4.33004 | overlap 2470175 TTATACCATACTGTG GAGGA AAT TCCTC TTGTTTTACTTACCT TERM 2717 2471948 - 2471894 - R 100 -14.6 -4.56133 | opp_overlap 2471894 TTTGAACAATGAAAA TAGCCATGTAACTAATAACTGCAGAA TAT CTCTGCATTTAAAAGTTACATAGCTA TTTTCATTACTAGCA TERM 2718 2471894 - 2471948 + r 100 -11.7 -4.45544 | opp_overlap 2471894 TTTGAACAATGAAAA TAGCCATGTAACTAATAACTGCAGA ATATC TCTGCATTTAAAAGTTACATAGCTA TTTTCATTACTAGCA cdsA 2472776 - 2471997 - | putative phosphatidate cytidylyltransferase uppS 2473523 - 2472789 - | undecaprenyl pyrophosphate synthetase TERM 2719 2473532 - 2473580 + r 95 -12.7 -3.45054 | opp_overlap 2473539, overlap 2473537 2473539 TATTCATATTTTGCC TCCAATATTGTTCTGACTCCTTA AAC TAAGGAGTCAGAAAAGTATGTGA TTATCAGTTCTACAC TERM 2720 2473537 - 2473575 + r 100 -15.6 -2.9796 | opp_overlap 2473539, overlap 2473532 2473539 ATATTTTGCCTCCAA TATTGTTCTGACTCCTTA AAC TAAGGAGTCAGAAAAGTA TGTGATTATCAGTTC TERM 2721 2473539 - 2473573 + r 100 -13.8 -3.03741 | opp_overlap 2473539, overlap 2473537 2473532 ATTTTGCCTCCAATA TTGTTCTGACTCCTTA AAC TAAGGAGTCAGAAAAG TATGTGATTATCAGT TERM 2722 2473572 - 2473539 - R 95 -13.5 -3.01791 | gap 1, opp_overlap 2473537 2473532 2473539 ATTTTGCCTCCAATA TTGTTCTGACTCCTTA AAC TAAGGAGTCAGAA-AA GTATGTGATTATCAG CD2136A 2473755 - 2473552 - | hypothetical protein TERM 2723 2473603 - 2473613 + g 70 -4 -4.89852 | TTCTACACTATCACC TATC TCA GATA TTTTTATAACTCTAG rrf 2474315 - 2473758 - | ribosome recycling factor pyrH 2475045 - 2474341 - | uridylate kinase TERM 2724 2475098 - 2475121 + r 79 -8.2 -4.11412 | opp_overlap 2475100, overlap 2475100 TTCTATTTTTTAAAA AAGAGAACAC CTGC GTGTTCTCTC TTTGGTTATTACTTA TERM 2725 2475119 - 2475100 - R 100 -10.8 -5.02074 | opp_overlap 2475100 2475098 CTATTTTTTAAAAAA GAGAACAC CTGC GTGTTCTC TCTTTGGTTATTACT TERM 2726 2475100 - 2475119 + r 91 -10.8 -3.63559 | opp_overlap 2475100, overlap 2475098 CTATTTTTTAAAAAA GAGAACAC CTGC GTGTTCTC TCTTTGGTTATTACT TERM 2727 2475138 - 2475150 + r 73 -7.7 -3.79678 | opp_overlap 2475138 TTGGTTATTACTTAA GTTGC TTA GCAAC TTCTTCTGCAAAGTT tsf 2476041 - 2475130 - | elongation factor Ts TERM 2728 2475759 - 2475778 + g 70 -5 -4.56597 | AAGCAGCATCTTTAA CGAACACT TTGA AGTCTTCG TTTTTAGCAACGAAA TERM 2729 2476078 - 2476108 + r 100 -14.2 -3.4015 | opp_overlap 2476079 2476083, overlap 2476069 2476079 2476083 2476106 ATTCTATTCCATATT ATAAATGGTAAGGG CGA CCCTTACCATTTAA TTGTCAAATTATTAT TERM 2730 2476079 - 2476107 + r 100 -17.7 -2.63367 | opp_overlap 2476079 2476083, overlap 2476078 2476069 2476083 2476106 TTCTATTCCATATTA TAAATGGTAAGGG CGA CCCTTACCATTTA ATTGTCAAATTATTA TERM 2731 2476107 - 2476079 - R 100 -17.7 -2.63596 | opp_overlap 2476079 2476078 2476069 2476083 2476106, overlap 2476083 TTCTATTCCATATTA TAAATGGTAAGGG CGA CCCTTACCATTTA ATTGTCAAATTATTA TERM 2732 2476083 - 2476103 + r 100 -14.1 -4.00526 | opp_overlap 2476079 2476083, overlap 2476079 2476078 2476069 ATTCCATATTATAAA TGGTAAGGG CGA CCCTTACCA TTTAATTGTCAAATT TERM 2733 2476103 - 2476083 - R 100 -14.1 -4.01888 | opp_overlap 2476083 2476079 2476078 2476069, overlap 2476079 ATTCCATATTATAAA TGGTAAGGG CGA CCCTTACCA TTTAATTGTCAAATT rpsB 2476833 - 2476120 - | 30S ribosomal protein S2 TERM 2734 2476928 - 2476981 + r 83 -6.6 -5.19916 | opp_overlap 2476957 ATGCTGTGTGTGATT TATT-TTATTTTTTCACCTCTAGT AGTATATC AC-AGAGGTGAAGAAATAACAATA TTTTTTCCATATTTT CD2141 2478233 - 2477040 - | D-alanyl-D-alanine carboxypeptidase TERM 2735 2477337 - 2477349 + g 75 -4.9 -5.11836 | TTTATCAATTACTTT TTTCA TAT TGAAA TTTTCTTTTCCATAT CD2142 2479413 - 2478328 - | hypothetical protein CD2143 2480253 - 2479600 - | putative transcriptional regulator CD2144 2480432 - 2481055 + | hypothetical protein TERM 2736 2481051 - 2481108 + T 100 -10.9 -5.30448 | opp_overlap 2481059 2481063, overlap 2481059 2481063 GATTTATGAAGATAT GTTAATAAGAAAGCAATCTAAAGATAA ACTT TTCTCTTTAGATTGCTTTCTTTTGTGC TTTTTATATTTATTT TERM 2737 2481059 - 2481100 + T 100 -17.7 -4.73912 | opp_overlap 2481059 2481063, overlap 2481051 2481063 AAGATATGTTAATAA GAAAGCAATCTAAAGATAA ACTT TTCTCTTTAGATTGCTTTC TTTTGTGCTTTTTAT TERM 2738 2481100 - 2481059 - T 100 -17.7 -3.6796 | opp_overlap 2481059 2481051 2481063, overlap 2481063 AAGATATGTTAATAA GAAAGCAATCTAAAGATAA ACTT TTCTCTTTAGATTGCTTTC TTTTGTGCTTTTTAT TERM 2739 2481096 - 2481063 - T 100 -12.7 -4.45738 | opp_overlap 2481059 2481051 2481063, overlap 2481059 TATGTTAATAAGAAA GCAATCTAAAGATAA ACTT TTCTCTTTAGATTGC TTTCTTTTGTGCTTT TERM 2740 2481063 - 2481096 + T 100 -12.7 -4.84219 | opp_overlap 2481063 2481059, overlap 2481059 2481051 TATGTTAATAAGAAA GCAATCTAAAGATAA ACTT TTCTCTTTAGATTGC TTTCTTTTGTGCTTT CD2145 2483028 - 2481118 - | DNA mismatch repair protein TERM 2741 2482160 - 2482170 + g 74 -3.2 -5.43553 | TTATTATTTATTTTT GGAG TAA TTCC TTTTATTTTTTGACT TERM 2742 2482691 - 2482701 + g 70 -4 -4.85599 | GAACTTAATGTAGGT GAAT AAA ATTC TTTTTCTAACATAAA TERM 2743 2482960 - 2482970 + g 72 -4 -5.12971 | TTTTCCTAGTGAACT TACA CAA TGTA TTTTTATTAAGTCTT TERM 2744 2483107 - 2483159 + r 75 -8.1 -3.6502 | opp_overlap 2483110 2483119 2483136 2483141 2483156, overlap 2483119 TAGTTATTTTGCGAA CAACTTAATAAATAAGGAGTT ATTATATATCA AACTCCTTATTTATTAAGAAG TTTAACTCCGGACTC TERM 2745 2483156 - 2483110 - R 95 -12.8 -3.62046 | opp_overlap 2483107 2483119, overlap 2483119 2483136 2483141 TTATTTTGCGAACAA CTTAATAAATAAGGAGTT ATTATATATCA AACTCCTTATTTATTAAG AAGTTTAACTCCGGA CD2146 2484629 - 2483562 - | hypothetical protein TERM 2746 2483944 - 2483972 + g 72 -7.7 -3.55202 | overlap 2483942 AATTTATCTTCCCTT TTCTCTATAAA ATTATGA TTTATAGAGAA TATTGTTTCAACATC TERM 2747 2484505 - 2484491 - G 70 -8.6 -2.65279 | overlap 2484487 CAACTGCTAAACCTA CAGGTA TTT TACCTG CATGTAAGTCAGGTA TERM 2748 2484677 - 2484697 + r 88 -6.8 -5.55769 | opp_overlap 2484677, overlap 2484688 AAAAAGTAGCAAAAA GCTGTGAC CTTTA GCCACAGC TTTTTTATTCTAAAC TERM 2749 2484697 - 2484677 - R 95 -9.7 -4.88129 | opp_overlap 2484677 2484688 AAAAAGTAGCAAAAA GCTGTGACC TTT AGCCACAGC TTTTTTATTCTAAAC CD2148 2485870 - 2484875 - | putative serine/threonine protein kinase TERM 2750 2485380 - 2485401 + g 71 -3.1 -5.18995 | ACCCCATTATTTGCT TTTGTAATT CCAA AATCACAAA TTTTTATATTGTATT TERM 2751 2486092 - 2486055 - R 100 -9.3 -4.9792 | opp_overlap 2486055 2486054 2486057 GATTTCACATAAAAA GAGTGTCTCTAAACTAA AAAG TTCATTTTGAGACACTC CCTTTTATATTACAA CD2149 2487387 - 2486128 - | hypothetical protein CD2150 2488255 - 2487626 - | putative endonuclease/exonuclease/phosphatase TERM 2752 2488408 - 2488374 - R 87 -5.9 -5.67063 | opp_overlap 2488374 TTTATCACAAAAAAA CCTAACTTAAGTA TTTATATTC TACATAAGTTAGG TTTTATAAACTATTA TERM 2753 2488374 - 2488408 + r 72 -5.9 -4.42619 | opp_overlap 2488374 TTTATCACAAAAAAA CCTAACTTAAGTA TTTATATTC TACATAAGTTAGG TTTTATAAACTATTA TERM 2754 2488920 - 2488867 - R 72 -7.7 -3.54741 | opp_overlap 2488870 2488875 2488877, overlap 2488857 2488875 GATTATCTTGTCAAA CAAAAAAAGCCATTTCAGTAAAAGC TTCT GCTTAAATTGAAATGACTTTTCTTA TTTAAATTATTAATT TERM 2755 2488875 - 2488912 + r 72 -4.9 -5.011 | opp_overlap 2488875 2488867, overlap 2488870 2488877 TGTCAAACAAAAAAA GCCATTTCAGTAAAAGC TTCT GCTTAAATTGAAATGAC TTTTCTTATTTAAAT TERM 2756 2488912 - 2488875 - R 88 -4.9 -5.95539 | opp_overlap 2488870 2488875 2488877, overlap 2488867 TGTCAAACAAAAAAA GCCATTTCAGTAAAAGC TTCT GCTTAAATTGAAATGAC TTTTCTTATTTAAAT CD2151 2490121 - 2488952 - | hypothetical protein TERM 2757 2490416 - 2490448 + H 86 -3.7 -6.13 | opp_overlap 2490415 2490416 2490419 2490426, overlap 2490417 ATTTTTACTTTAAAT CTATATAATATAAAT CAA ATTTATTTTATATAC TTTTTTTTTAAATAT TERM 2758 2490417 - 2490447 + H 75 -7.2 -4.2536 | opp_overlap 2490415 2490416 2490419 2490426, overlap 2490416 TTTTTACTTTAAATC TATATAATATAAAT CAA ATTTATTTTATATA CTTTTTTTTTAAATA CD2152 2490554 - 2491594 + | putative glutamyl-aminopeptidase TERM 2759 2491921 - 2491902 - f 75 -8 -3.85698 | opp_overlap 2491902 2491912 TTTCTTTTGTAGAAA CTTTTCTT TACA AAGAAAAG TTTTTTGATTTTGGA TERM 2760 2491902 - 2491921 + F 100 -8 -5.46698 | opp_overlap 2491902, overlap 2491912 TTTCTTTTGTAGAAA CTTTTCTT TACA AAGAAAAG TTTTTTGATTTTGGA CD2153 2491975 - 2492226 + | hypothetical protein TERM 2761 2493217 - 2493199 - g 74 -5.4 -4.87626 | TTGGAACAGTAAAAA TTCCTAAT ATG ATTAGAAA GAAAACTGGCAAAAA CD2154 2492241 - 2493449 + | putative ATP/GTP-binding protein TERM 2762 2494526 - 2494504 - g 78 -6.3 -4.78839 | opp_overlap 2494499 2494504, overlap 2494506 AAGTTTAGAAGAAAA CATCAAGTC ATTAG GACTTGAAG TTGACTATTCTCGCG TERM 2763 2494524 - 2494506 - g 74 -7.5 -4.00512 | opp_overlap 2494504 2494499, overlap 2494504 GTTTAGAAGAAAACA TCAAGTC ATTAG GACTTGA AGTTGACTATTCTCG CD2155 2493479 - 2494570 + | biotin synthase thiH 2494571 - 2495947 + | thiamine biosynthesis protein ThiH TERM 2764 2496137 - 2496124 - g 87 -3.9 -5.86609 | TCAAAAAAATAAAAA TATCA AACT TGATA ATACACACAAAGTCA CD2157 2496038 - 2496466 + | hypothetical protein TERM 2765 2496471 - 2496521 + T 77 -6.5 -4.59376 | gap 1, opp_overlap 2496474, overlap 2496464 2496462 2496473 2496474 2496476 TTTGTGGGTAACTTA AAAGAGTTATCTCA-TTTCAGAAA TAAT TTTCTAAAATTGAGATAACTCCTA TTTTCATTTAATACT TERM 2766 2496473 - 2496519 + T 81 -9.1 -3.90002 | gap 1, opp_overlap 2496474, overlap 2496464 2496462 2496471 2496474 2496476 TGTGGGTAACTTAAA AGAGTTATCTCA-TTTCAGAAA TAAT TTTCTAAAATTGAGATAACTCC TATTTTCATTTAATA TERM 2767 2496518 - 2496474 - T 100 -14.8 -4.27316 | gap 1, opp_overlap 2496464 2496462 2496473 2496471 2496474 2496476 GTGGGTAACTTAAAA GAGTTATCTC-ATTTCAGAAA TAAT TTTCTAAAATTGAGATAACTC CTATTTTCATTTAAT TERM 2768 2496474 - 2496518 + T 91 -12.6 -2.92917 | gap 1, opp_overlap 2496474, overlap 2496464 2496462 2496473 2496471 2496476 GTGGGTAACTTAAAA GAGTTATCTCA-TTTCAGAAA TAAT TTTCTAAAATTGAGATAACTC CTATTTTCATTTAAT TERM 2769 2496476 - 2496516 + T 78 -9.4 -3.00115 | gap 1, opp_overlap 2496474, overlap 2496464 2496462 2496474 2496473 2496471 GGGTAACTTAAAAGA GTTATCTCA-TTTCAGAAA TAAT TTTCTAAAATTGAGATAAC TCCTATTTTCATTTA gabT 2497866 - 2496541 - | 4-aminobutyrate aminotransferase TERM 2770 2498095 - 2498069 - R 80 -6.7 -5.04249 | opp_overlap 2498077 TTTTCAAAAAATAAA GGACTCTAT TCTATTTTT ATAGAGTCC TCTGAAAATCATCTT CD2159 2498937 - 2498152 - | hypothetical protein CD2160 2500011 - 2499052 - | hypothetical protein TERM 2771 2499697 - 2499715 + g 70 -6.2 -4.15696 | opp_overlap 2499696 2499697 2499699 2499705, overlap 2499705 TGCTAGGCTAACAAG TATAATTA CTA TAATTATA GTTTTTTTATTTAGA TERM 2772 2499705 - 2499716 + g 86 -3 -5.96894 | opp_overlap 2499699 2499697 2499696 2499705, overlap 2499697 TAACAAGTATAATTA CTAT AATT ATAG TTTTTTTATTTAGAT TERM 2773 2499767 - 2499756 - G 82 -4.4 -5.50499 | opp_overlap 2499742 2499762 CTATAGGTAAAAAAA TTCC CATA GGAA TAAATATACCTATAT TERM 2774 2500149 - 2500112 - R 73 -2.8 -5.63517 | opp_overlap 2500120, overlap 2500120 TTTTCAAACAAAAAA TCAAAAAAGCCTACAC TTAAAT GTGTAGACTTTAATAA ATTTTCATACAAATA TERM 2775 2500141 - 2500120 - R 88 -6.6 -5.59502 | opp_overlap 2500120, overlap 2500112 CAAAAAATCAAAAAA GCCTACAC TTAAAT GTGTAGAC TTTAATAAATTTTCA CD2161 2500486 - 2500169 - | hypothetical protein CD2162 2501096 - 2500593 - | putative acetyltransferase CD2163 2502347 - 2501148 - | putative RNA-binding protein TERM 2776 2503280 - 2503251 - g 82 -10.9 -2.60797 | opp_overlap 2503256, overlap 2503250 2503256 TTGATATAGATGAAT CTAAATCAAAAGC TCAA GCTTTAGATTTAG CTGATGCAGTTTCAT TERM 2777 2503335 - 2503319 - g 70 -8.1 -3.09415 | overlap 2503317 CATAAAGTACATATA GAAAAAG GAA CTTTTTC TGACTGTAAAGATTC ldh 2503130 - 2504098 + | L-lactate dehydrogenase CD2165 2505345 - 2504215 - | hypothetical protein TERM 2778 2505471 - 2505434 - R 100 -8 -5.64274 | opp_overlap 2505439 CTATTGACAAAAAAA CAAAAGGTGAAAATAT TTTTTT AGATTTTCACCTTTTA GATAAGTTTATAATA msrAB 2506457 - 2505498 - | peptide methionine sulfoxide reductase CD2167 2507498 - 2506575 - | patatin-like phospholipase TERM 2779 2506663 - 2506647 - G 72 -8.1 -3.34517 | overlap 2506645 ATTTTCTCCTAAAGA CATTAGA TAT TCTAATG CATCACAATCATCCA TERM 2780 2507016 - 2507004 - G 72 -4.1 -5.02476 | ATATGTTGGAAAAAA TACTG GAG CAGCA CTACTTGCCATTGCT TERM 2781 2507648 - 2507631 - R 73 -4.3 -5.11836 | opp_overlap 2507633 2507635, overlap 2507638 ATACTTAAAATAAAA TATATAA GATA TTATATA TCTAAGTATTATAAA TERM 2782 2507786 - 2507733 - R 70 -3.6 -5.1471 | gap 2, opp_overlap 2507744 2507751, overlap 2507751 ATTACAAAAAATAAA TAAAGGGTC-ATCTCAAAA-TTGATT TTTT AATCAAATTTTAAGTTTAACCCCTTA TCTTAATTGTGGCAT hcp 2509443 - 2507851 - | hydroxylamine reductase CD2169 2510228 - 2509503 - | iron-sulfur binding protein TERM 2783 2509828 - 2509841 + g 70 -3.9 -5.02323 | TTTAAATATGATGCA TTAGT TGGT ACTAA TTTTATTTGTACTGG TERM 2784 2510733 - 2510744 + G 70 -4.4 -4.99645 | opp_overlap 2510733 CAGTAACCACAACAT CTTC TTGC GAAG TTTTATTTATAAAGT CD2170 2510369 - 2511097 + | putative cNMP-binding regulatory protein TERM 2785 2511191 - 2511248 + T 100 -15 -3.13475 | gap 2, opp_overlap 2511198, overlap 2511184 2511198 AATTTATATTTTTAC TTAA-AAAGTTAATAGGTATC-TAATTT ATTA AAATTAAGATACCTATTAACTTTATTAA TTAAGTGTACAATTA TERM 2786 2511198 - 2511240 + T 100 -14.7 -4.33621 | gap 1, opp_overlap 2511198, overlap 2511191 ATTTTTACTTAAAAA GTTAATAGGTATC-TAATTT ATTA AAATTAAGATACCTATTAAC TTTATTAATTAAGTG TERM 2787 2511240 - 2511198 - T 100 -14.7 -4.66163 | gap 1, opp_overlap 2511198 2511191 ATTTTTACTTAAAAA GTTAATAGGTATC-TAATTT ATTA AAATTAAGATACCTATTAAC TTTATTAATTAAGTG CD2171 2512532 - 2511471 - | putative Sodium:dicarboxylate symporter TERM 2788 2513040 - 2513089 + r 87 -10.4 -3.20633 | opp_overlap 2513040 2513042, overlap 2513042 ATCTAATAATAAAAA TATACTCCCATTAAATTTATTA TCTAAC TTATAAATTTAATGGGGGTATC TTACATATCTTCTAA TERM 2789 2513089 - 2513040 - R 100 -8.2 -5.30348 | opp_overlap 2513040 2513042, overlap 2513042 ATCTAATAATAAAAA TATACTCCCATTAAATTTATTA TCTAAC TTATAAATTTAATGGGGGTATC TTACATATCTTCTAA TERM 2790 2513087 - 2513042 - R 95 -10.8 -4.27297 | opp_overlap 2513042 2513040, overlap 2513040 CTAATAATAAAAATA TACTCCCATTAAATTTATTA TCTAAC TTATAAATTTAATGGGGGTA TCTTACATATCTTCT TERM 2791 2513042 - 2513087 + r 95 -13 -3.15985 | opp_overlap 2513040 2513042, overlap 2513040 CTAATAATAAAAATA TACTCCCATTAAATTTATTA TCTAAC TTATAAATTTAATGGGGGTA TCTTACATATCTTCT CD2172 2513872 - 2513123 - | amino-acid ABC transporter, ATP-binding protein CD2173 2515171 - 2513981 - | putative peptidase TERM 2792 2514829 - 2514805 - G 70 -6.5 -4.1899 | overlap 2514825 TTATGTCATTTAAAA TCATTGCTGTT CCT AACAACCATGA AACATGTGCATCATG TERM 2793 2515260 - 2515220 - R 100 -13.7 -3.10513 | opp_overlap 2515216 2515225, overlap 2515222 2515225 ACATTGTAATACACA GATAACTATAGATAAATTT AGT ATACTTATCTATAGTTATC ACAGTTTTACATTTT TERM 2794 2515258 - 2515222 - R 85 -10.5 -3.10761 | opp_overlap 2515216 2515225, overlap 2515220 2515225 ATTGTAATACACAGA TAACTATAGATAAATTT AGT ATACTTATCTATAGTTA TCACAGTTTTACATT TERM 2795 2515255 - 2515225 - R 73 -7.8 -3.69083 | opp_overlap 2515216 2515225, overlap 2515222 2515220 GTAATACACAGATAA CTATAGATAAATTT AGT ATACTTATCTATAG TTATCACAGTTTTAC CD2174 2516086 - 2515289 - | amino-acid ABC transporter,substrate-binding protein CD2175 2516808 - 2516146 - | amino-acid ABC transporter, permease protein CD2176 2517712 - 2517044 - | amino-acid ABC transporter, permease protein CD2177 2518508 - 2517705 - | amino-acid ABC transporter,substrate-binding protein TERM 2796 2517889 - 2517899 + g 72 -2.6 -5.47964 | GGAGGTTCTATCATT TTAA GAT TTAA TTTTTGTTCTTTTAT TERM 2797 2518219 - 2518235 + g 71 -6.6 -3.9398 | overlap 2518219 GTTGCAGTAAGTTGA GCAGAT ACAGC ATCTGC TTTATCAGCTTCTAA TERM 2798 2518864 - 2518827 - R 100 -9.5 -5.29782 | gap 1, opp_overlap 2518827 TATATCCATAAAAAA GCTATATTGAGTTT-TCA TTA TAACAAACTCAATACAGC TTTTTGTAAAAATAT TERM 2799 2518827 - 2518864 + r 73 -5.8 -4.84761 | opp_overlap 2518827 TATATCCATAAAAAA GCTATATTGAGTTT TCATTATAAC AAACTCAATACAGC TTTTTGTAAAAATAT CD2178 2519338 - 2518916 - | putative iron-sulfur subunit of hydrogenase CD2179 2521529 - 2519352 - | putative formate dehydrogenase TERM 2800 2520836 - 2520860 + g 100 -8.7 -5.56372 | TCGGTGTTATTCTAG GGTCTACAATT ATA AATTTTAGACC TTTTTCTTTTAATTT TERM 2801 2522552 - 2522539 - g 76 -2.5 -5.50499 | TCACATTCAAAAAAA TTTAT GGAG ATAAA TGCAAGCTCTTTAAA TERM 2802 2522963 - 2522953 - g 70 -4 -4.94147 | opp_overlap 2522953 AATAATATAACAAAA GATT TTA AATC TGAGTTCTACTTTGA TERM 2803 2524881 - 2524871 - g 76 -2.6 -5.60689 | CTATAGAAGAAAAAA TAAT AAA ATTA CAAGAAAGTAAAAAA CD2180 2521801 - 2524989 + | putative helicase CD2181 2526038 - 2525274 - | putative aromatic compounds hydrolase CD2182 2526481 - 2526194 - | hypothetical protein csdA 2527994 - 2526501 - | ATP-dependent RNA helicase TERM 2804 2528203 - 2528160 - R 100 -14.2 -3.7108 | opp_overlap 2528160 2528158 2528156 ATTTTTATATTTAAA TACCTCCTTAAATATACTGA TAAA TCAATATTTTCAAGGAGGTA TCTCTTGTCAATAAT TERM 2805 2528160 - 2528203 + r 85 -9.8 -3.19212 | opp_overlap 2528160, overlap 2528158 2528156 ATTTTTATATTTAAA TACCTCCTTAAATATACTGA TAAA TCAATATTTTCAAGGAGGTA TCTCTTGTCAATAAT TERM 2806 2528306 - 2528291 - R 72 -6.2 -4.43681 | TATCTAATATTAAAA GGTATT AATC AATACC TAAATCACCATAATC CD2184 2528864 - 2528322 - | N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase) (partial) region relative to most database matches. CD2185 2530110 - 2529154 - | hypothetical protein TERM 2807 2529627 - 2529650 + g 70 -4 -4.94058 | CTTTTAAAGTATTAC TTATATTCAA TTGT TTGAATACAA TTTTATTTACATTAG CD2186 2530620 - 2530129 - | phage-like hypothetical protein TERM 2808 2530206 - 2530190 - G 72 -8.1 -3.25779 | opp_overlap 2530188, overlap 2530188 CTAATAAATAAATTA TCATCTA AAA TAGATGA AGTAATATCTTGTAT TERM 2809 2530320 - 2530330 + g 70 -4 -4.88795 | ATGTATTTTTTTTAC TAGA ATT TCTA TTTCTTTTATTGCCT TERM 2810 2531041 - 2531011 - R 100 -17.2 -4.18697 | opp_overlap 2531014, overlap 2531014 AAAAGCATGTCAAAA TAAGGCTATGATTT TAA AAATCATAGCCTTA TCAATAAAAATTTAA TERM 2811 2531014 - 2531038 + r 100 -14.5 -3.36175 | opp_overlap 2531011 2531014 AGCATGTCAAAATAA GGCTATGATTT TAA AAATCATAGCC TTATCAATAAAAATT TERM 2812 2531038 - 2531014 - R 100 -14.5 -4.20148 | opp_overlap 2531014, overlap 2531011 AGCATGTCAAAATAA GGCTATGATTT TAA AAATCATAGCC TTATCAATAAAAATT CD2187 2531956 - 2531063 - | putative phage-related cell wall hydrolase mapA 2534467 - 2532182 - | maltose phosphorylase pgmB 2535144 - 2534464 - | beta-phosphoglucomutase CD2190 2537251 - 2535368 - | cyclomaltodextrinase (maltogenic alpha-amylase) TERM 2813 2536033 - 2536017 - G 73 -9.5 -2.50816 | overlap 2536002 2536016 2536019 TGGTCACCCATTAAC CATGGTA AAC TACCATG CCAAATTTCTCCCAA TERM 2814 2537355 - 2537298 - R 83 -11.3 -2.57983 | opp_overlap 2537284 2537307, overlap 2537297 2537305 ATAATCTAAAGATAG GTTAATATATTTTACTATTATAT CACAATAAAAAT ATATAATAGTAAAATATATCAAC AATAAACTATTCAAT TERM 2815 2537450 - 2537430 - R 100 -8.3 -5.50723 | TTAGCAAAATAAAAA CCTCTAGTA TTT TTCTAGAGG ATACAATATTATAAC CD2191 2538330 - 2537509 - | putative phosphoesterase CD2192 2538874 - 2538521 - | hypothetical protein CD2193 2540358 - 2538916 - | cell surface protein TERM 2816 2539421 - 2539431 + g 76 -6.8 -4.3739 | GTCTCATTTTTCATA GGTG ACT CACC TTTTGTAGACGAATC TERM 2817 2540431 - 2540396 - H 88 -8.6 -4.74504 | gap 1, opp_overlap 2540396 AGTTTAATTCAAAAA TGACTATAACATAGTAT TAC AT-CTACGCTATAGTCA TTTATTATAATTTAA TERM 2818 2542123 - 2542108 - g 76 -2.6 -5.56568 | gap 1, opp_overlap 2542108, overlap 2542099 ACATTATTAAAAAAA TTGACTG CTT CAG-CAA GTTTTTCTAAATATA CD2194 2541031 - 2542245 + | putative regulator of a specific sugar metabolism CD2195 2542337 - 2542852 + | ferritin TERM 2819 2542882 - 2542926 + T 70 -4.6 -4.96523 | opp_overlap 2542879 2542882, overlap 2542918 TAATATAATAAAGAA GGTGTTTTAATGAAAA TCAAGATTGATTC TTATCATTAAAACACC TTTTATTATTCGTTT CD2196 2545218 - 2543119 - | putative acetyl-CoA synthetase TERM 2820 2544216 - 2544236 + g 73 -9.1 -2.59323 | overlap 2544206 2544215 TCATTTCTTCTTTAG TTGCAGAAG ATA TTTCTGCAA GTTCTACACCATTTT CD2197 2545881 - 2545342 - | putative subunit of oxidoreductase CD2198 2546624 - 2545884 - | putative subunit of oxidoreductase CD2199 2547675 - 2546626 - | putative subunit of oxidoreductase CD2199A 2547928 - 2547692 - | putative oxidoreductase, ferredoxin subunit CD2200 2549046 - 2547943 - | putative histidinol-phosphate aminotransferase CD2201 2550579 - 2549149 - | lactose permease TERM 2821 2549885 - 2549895 + g 74 -5.4 -4.88495 | TGAAGAACTTCTTCT TCTG CTC CAGA TTTTATTATCTCTGT TERM 2822 2550939 - 2550953 + H 81 -5.8 -5.38549 | TCTATACTACATCCA GATATT AAA AATATC TTTTTCTTATTTAAA TERM 2823 2551170 - 2551202 + H 100 -10.3 -4.6759 | opp_overlap 2551179, overlap 2551179 2551201 ATATCGTACTACTTT TATATAAAATATATT TTA AATATATTTTGTATA TTTTATTAAAATATT CD2202 2551237 - 2552601 + | putative sodium/solute symporter TERM 2824 2552786 - 2552764 - g 72 -7.8 -3.63694 | opp_overlap 2552758 ATTTAGGTCTAATAA GCTATTACTT CTC AAGTAAAAGC GAAATAGGAGCTATA CD2203 2552625 - 2553278 + | TetR family transcriptional regulator TERM 2825 2553298 - 2553348 + T 100 -16.7 -2.84801 | opp_overlap 2553263 2553304, overlap 2553302 ATTTTATTAAATTCT TAGAGACTGAAATTTTAAAATCA TAATT TGATTTTAGGATTTCAGTCTTTA TCATATTTAAAGATA TERM 2826 2553302 - 2553344 + T 100 -15.3 -4.1043 | opp_overlap 2553263 2553304, overlap 2553298 TATTAAATTCTTAGA GACTGAAATTTTAAAATCA TAATT TGATTTTAGGATTTCAGTC TTTATCATATTTAAA CD2204 2554179 - 2553397 - | esterase CD2205 2555462 - 2554296 - | hypothetical protein aldH 2556965 - 2555601 - | aldehyde dehydrogenase TERM 2827 2555880 - 2555896 + g 74 -6.6 -4.24562 | opp_overlap 2555879 2555873 2555880 TGTAAAAATATAAAG TGCCAA TGGAT TTGGCA TTTGTATAATTTTTT TERM 2828 2556161 - 2556173 + g 73 -3.5 -5.24647 | opp_overlap 2556157, overlap 2556157 TATCTCCAAAATACT TATTA GTA TAATA TTTTATTTTCTCTAT CD2207 2557801 - 2557277 - | putative flavodoxin CD2208 2558348 - 2557851 - | MarR family transcriptional regulator TERM 2829 2558399 - 2558437 + r 83 -9.2 -3.52668 | opp_overlap 2558399, overlap 2558401 2558436 TTTGATAATTTTAAA TAGTAATTAGTTACTTTA TAT TATAGTAATTAGTTACTA TTGTGTCAATAAATT TERM 2830 2558499 - 2558476 - R 84 -8.9 -4.26189 | opp_overlap 2558476 TTATAAATGGCAAAA CGGCATAGC ATTATG GCTATACCG TTTCATAAAATCATA CD2209 2559858 - 2558581 - | putative GTP-binding protein TERM 2831 2560314 - 2560288 - R 78 -7.6 -4.36411 | opp_overlap 2560298 CATCAACTATTAAAA TTAAATTCTATT TAT AATAAAATTTAA AGAATAAAATTAAAT CD2210 2562409 - 2560577 - | ABC transporter, ATP-binding/permease protein CD2211 2564648 - 2562402 - | ABC transporter, ATP-binding/permease protein TERM 2832 2562928 - 2562939 + g 74 -3 -5.48063 | opp_overlap 2562928 TTTTCCCTTAAATCA TGTT GAGA AACA TTTTTTATATTAACT CD2212 2565177 - 2564716 - | MarR family transcriptional regulator TERM 2833 2565202 - 2565219 + r 75 -7.1 -4.29905 | opp_overlap 2565204, overlap 2565199 CCTTATTTTTTATAT TACTTAG TCAG CTAAGTA TTATTTTACTATACT TERM 2834 2565439 - 2565412 - R 100 -8.6 -5.63517 | TTTTCAAATAAAAAA GTTGTCCCAAAA TAAA TTTTGAAACAAC ATCATATTCAACAGT CD2213 2566114 - 2565482 - | putative carbonic anhydrase CD2214 2566735 - 2567073 + | putative regulatory protein CD2215 2567095 - 2567412 + | putative regulatory protein TERM 2835 2567426 - 2567403 - f 81 -7 -4.74611 | opp_overlap 2567408, overlap 2567408 2567413 CATCATAAAAAAGAA TAAAATATAA TTCT TTATATTTTA TATAAAAAAAAAGGT TERM 2836 2567439 - 2567459 + F 100 -7.7 -5.9667 | opp_overlap 2567439 TTATATAAAAAAAAA GGTTATTTG AAA TAAATAACC TTTTTTTGTCTTTTT TERM 2837 2567459 - 2567439 - f 100 -7 -6.30182 | opp_overlap 2567439 TTATATAAAAAAAAA GGTTATTT GAAAT AAATAACC TTTTTTTGTCTTTTT TERM 2838 2567482 - 2567519 + F 83 -9.3 -3.53307 | opp_overlap 2567484 2567515, overlap 2567513 GTCTTTTTGTGTTAA CATTGTCTTATAGTGCT AATG AGTACTATTAGACCATG TTCTATGGCCTTATT CD2216 2567562 - 2568239 + | hypothetical protein TERM 2839 2568389 - 2568409 + T 85 -11.3 -2.92267 | overlap 2568386 TCTAGTAGGTTTTAA TGGCATATT TTA AATATGCCA TAGTTGATTTATAAG aroD 2569346 - 2568567 - | 3-dehydroquinate dehydratase TERM 2840 2568863 - 2568875 + g 78 -6.3 -4.80853 | opp_overlap 2568862 2568863 GCATTCTACATAAAC GAGAT ACA ATCTC TTCTTTTTTTGGAGT TERM 2841 2569864 - 2569909 + r 71 -5.5 -4.58663 | overlap 2569869 2569908 TCTTTTCATAAGTTG GTAAATGTCGATATATCCTGT ATCT ACAAGGAGTATCGGCATTTTC TTTTTGGAAGATACT TERM 2842 2569869 - 2569904 + r 70 -4 -5.26119 | overlap 2569864 TCATAAGTTGGTAAA TGTCGATATATCCTGT ATCT ACAAGGAGTATCGGCA TTTTCTTTTTGGAAG int 2570845 - 2570006 - | integrase (partial) CD2219 2570913 - 2571620 + | conjugative transposon protein (partial) CD2220 2571708 - 2572328 + | putative cAMP-binding regulatory protein TERM 2843 2572369 - 2572345 - f 87 -7.3 -5.11033 | opp_overlap 2572345, overlap 2572348 TATAATTTCAAAAAA GTATTGAATAA TAA TTATTCAATGC TTTTTTATTTCGGGT TERM 2844 2572345 - 2572369 + F 100 -9.5 -5.64421 | opp_overlap 2572345 2572348 TATAATTTCAAAAAA GTATTGAATAA TAA TTATTCAATGC TTTTTTATTTCGGGT TERM 2845 2572366 - 2572348 - f 70 -7.6 -3.39328 | opp_overlap 2572345, overlap 2572345 AATTTCAAAAAAGTA TTGAATAA TAA TTATTCAA TGCTTTTTTATTTCG TERM 2846 2572382 - 2572393 + F 73 -5.8 -4.84881 | TGCTTTTTTATTTCG GGTC AAGT GACC TATTTTTTTTTATTT TERM 2847 2572501 - 2572490 - f 73 -4.4 -5.21709 | TGTTATACTAAAAAA GAAG CATA CTTC CCAACTCCAGACTTA CD2221 2572517 - 2572879 + | putative plasmid-related protein (partial) TERM 2848 2573098 - 2573114 + G 84 -9.5 -3.72576 | opp_overlap 2573100 AATCAGATTTGAACT CACTTCT ATT AGAAGTG TTTGATAGACAAGCA CD2222 2573007 - 2573933 + | hypothetical protein TERM 2849 2574114 - 2574124 + F 78 -5.4 -5.24129 | AGATGTTAAACAACT TAGC TAT GCTA TTTTTTATCAAGAAA TERM 2850 2574606 - 2574637 + F 90 -5.3 -5.9667 | gap 1 ATACGTTTTAAAGAA TACACATTTTTGCC CTATA GGCAGAG-TGTGTA TTTTTTTCTCTTTTT CD2223 2574631 - 2575125 + | putative conjugative transposon protein CD2224 2575127 - 2575357 + | putative conjugative transposon protein TERM 2851 2576287 - 2576275 - g 76 -6.3 -4.64676 | opp_overlap 2576275 2576274 CTATTGGTAAGAAAA TGACA GTT TGTCA GTTATACGCTAAAAA CD2225 2576028 - 2576381 + | integrase (partial) sat 2576453 - 2577085 + | streptogramin A acetyltransferase TERM 2852 2577234 - 2577205 - T 90 -6.6 -5.67711 | opp_overlap 2577205, overlap 2577211 2577219 TAAATAAAATAAAAA GTAAAGTTACTT AATAAA AAGTTACTTTAC TTTTTATTATTTAAA TERM 2853 2577205 - 2577234 + T 87 -6.6 -5.38549 | opp_overlap 2577205 2577211 2577219 TAAATAAAATAAAAA GTAAAGTTACTT AATAAA AAGTTACTTTAC TTTTTATTATTTAAA TERM 2854 2577396 - 2577356 - T 100 -18 -5.7946 | opp_overlap 2577356 TTTTTAATAAAAAAA TCATGCTACATCAATAGT AAGCA ACTATTAATGTAGCATGA TTTTTTGTATCTAAA TERM 2855 2577356 - 2577396 + T 100 -15.8 -5.4251 | opp_overlap 2577356 TTTTTAATAAAAAAA TCATGCTACATCAATAGT AAGCA ACTATTAATGTAGCATGA TTTTTTGTATCTAAA CD2227 2578313 - 2577456 - | radical SAM superfamily lipoprotein CD2228 2579222 - 2578422 - | hypothetical protein TERM 2856 2578982 - 2579008 + g 73 -8.2 -3.3907 | opp_overlap 2578989, overlap 2578983 2578989 CTTTTCTTCCTTTTG GTGTAAATGAAA TGT TTTCATTTACAG TTACTTCAACTTTAC TERM 2857 2578983 - 2579007 + g 89 -11.7 -2.6296 | opp_overlap 2578989, overlap 2578982 2578989 TTTTCTTCCTTTTGG TGTAAATGAAA TGT TTTCATTTACA GTTACTTCAACTTTA TERM 2858 2579386 - 2579397 + r 80 -3 -6.07374 | opp_overlap 2579386 TTTTCATATAAAATT CATA AATA TATG TTTTTTGTTTTTTAT TERM 2859 2579477 - 2579446 - R 100 -9.8 -4.77775 | gap 1, opp_overlap 2579446 ATTTTATAAAACAAA TAGCCATATACTTTA TTT TAAA-TATATGGCTA TTCTATAATTTAATA TERM 2860 2579446 - 2579477 + r 90 -9.8 -3.65782 | gap 1, opp_overlap 2579446 ATTTTATAAAACAAA TAGCCATATACTTTA TTT TAAA-TATATGGCTA TTCTATAATTTAATA CD2229 2581515 - 2579494 - | hypothetical protein TERM 2861 2580558 - 2580580 + g 72 -5.1 -4.82667 | opp_overlap 2580558 2580560 AATTTTCTAAAACAC TATAAATTT CTTTT AAATTTATA TTTTTAGTATCCTGA TERM 2862 2581672 - 2581683 + r 82 -3 -6.23545 | ACCGATATATTTTCG TATG CTCC CATA TTTTTTTTGTTTCAA TERM 2863 2581765 - 2581722 - R 76 -4.2 -5.36364 | gap 1 TCAAAAATATAAAAA TAACTCTCTCAAC-AATAC TAAAAAT GTATTTATCAAGAGAGTTA TAATTTATACAATAA nirC 2582559 - 2581783 - | putative nitrite transporter asrC 2583596 - 2582616 - | anaerobic sulfite reductase subunit C asrB 2584391 - 2583600 - | anaerobic sulfite reductase subunit B asrA 2585408 - 2584392 - | anaerobic sulfite reductase subunit A TERM 2864 2585198 - 2585210 + g 72 -6.3 -4.25848 | ATACTTGATTTATGG GAAGT ACA ACTTC TTTTGGTGAAAAGTT TERM 2865 2585516 - 2585546 + r 86 -4.2 -5.9218 | AAATAATAAAAAAAA TATTAATGGAGTTT ATT AAGTTCTGTTAATA TTTTTTTATTATCTA TERM 2866 2585733 - 2585716 - R 91 -7.1 -5.60689 | opp_overlap 2585716 2585714 2585719 TTAGACAATAAAAAA GAATCTA TAAA TAGATTC TCTTAATAATATTTT CD2234 2586479 - 2585790 - | cAMP-binding regulatory protein CD2235 2587390 - 2586542 - | transcriptional regulator TERM 2867 2587138 - 2587148 + g 86 -2.6 -6.13503 | CATTTTGTATATTTT TATT TAT AATA TTTTTTTTATTGATA CD2236 2588296 - 2587409 - | putative glucokinase CD2237 2589157 - 2588354 - | hypothetical protein CD2238 2589769 - 2589317 - | hypothetical protein TERM 2868 2589880 - 2589838 - R 95 -11.7 -3.58766 | opp_overlap 2589852 AAGTATATTATACAA TCTTATAGAGTAACTAAAT TATTT ATCTAATCACTCTATAAGA CAATTTATCATTTAA CD2239 2591401 - 2589899 - | putative sodium:solute symporter nanA 2592315 - 2591434 - | N-acetylneuraminate lyase nanE 2593056 - 2592385 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 2869 2592759 - 2592779 + g 81 -9.1 -3.55548 | TTGGTCTAACTCTAT TGGTAGCAT CTA ATGCTATCA TTTCACACCCTGTTG TERM 2870 2593318 - 2593298 - R 100 -9.1 -5.80364 | opp_overlap 2593298, overlap 2593315 ATTTCAATAAAAAAA CCCATGTAT ACT ATACATAGG TTTCCCAATATTATT CD2242 2593835 - 2593329 - | hypothetical protein CD2243 2595206 - 2593842 - | hypothetical protein CD2244 2595625 - 2596800 + | putative signaling protein TERM 2871 2596924 - 2596886 - T 74 -4.8 -5.2291 | opp_overlap 2596889 ATAGTACAATAAAAA TAACTTGCATATCTCT AAAATAG ATAAATATGCAAGTCA TTTTAGTGTTTATAC asnC 2598370 - 2596973 - | asparaginyl-tRNA synthetase TERM 2872 2598462 - 2598431 - R 100 -9.5 -5.80364 | opp_overlap 2598431, overlap 2598455 ATTTCAATAAAAAAA GCCCTTCATCCCT ATATAA AGGGACGAAAGAC TATTACTCTCGCGGT CD2245A 2599052 - 2598849 - | hypothetical protein cspC 2600989 - 2599316 - | putative germination-specific protease cspBA 2604397 - 2600999 - | putative germination-specific protease TERM 2873 2601191 - 2601173 - G 70 -8.8 -2.65483 | opp_overlap 2601168 2601180, overlap 2601170 2601168 ATATTGAAAATACAT TGCAGCAG CAC CAGCTGCA TGTGCACTTGCTGCT TERM 2874 2601456 - 2601478 + g 80 -10 -3.30651 | overlap 2601454 AAAAGTTCTCTATTT GGAAGGTATA AGT TATATCTTCC TGTTATAATATAAAC TERM 2875 2602224 - 2602237 + g 72 -4.5 -4.93877 | overlap 2602222 ATATAAAAACCATCA GGAGG AGTT CCTTC TTTTGTTTGGTCCCA TERM 2876 2603068 - 2603058 - G 70 -4 -5.00616 | CCTCCTGGTAAAAAA GATA CTA TATC TTCACCTGGAGCTAA TERM 2877 2604558 - 2604513 - R 86 -4.4 -5.92337 | gap 1, opp_overlap 2604520, overlap 2604517 2604520 ATATATTAAAAAAAA TAAATAATGATGGTACAATTT TGAAT AAATCATACCATCATT-TATA TTTACTTTATCTTGA TERM 2878 2604555 - 2604517 - R 100 -7.7 -5.36018 | opp_overlap 2604520, overlap 2604513 2604520 ATTAAAAAAAATAAA TAATGATGGTACAATTT TGAAT AAATCATACCATCATTT ATATTTACTTTATCT TERM 2879 2604552 - 2604520 - R 93 -9.4 -4.68355 | opp_overlap 2604520, overlap 2604517 2604513 AAAAAAAATAAATAA TGATGGTACAATTT TGAAT AAATCATACCATCA TTTATATTTACTTTA CD2248 2605761 - 2604565 - | hypothetical protein CD2249 2606603 - 2605782 - | putative ATPase TERM 2880 2606704 - 2606673 - H 70 -4.6 -4.96848 | opp_overlap 2606676 2606679, overlap 2606647 2606676 TTTTTGATATAAAAA TAATAATACAATAC ATTT GTATAGTATTATTC TAAAATTCTATATCT TERM 2881 2606701 - 2606676 - H 74 -6.3 -4.58943 | opp_overlap 2606676 2606679, overlap 2606647 2606673 TTGATATAAAAATAA TAATACAATAC ATTT GTATAGTATTA TTCTAAAATTCTATA CD2250 2607067 - 2608161 + | hypothetical protein TERM 2882 2608210 - 2608195 - f 72 -6.2 -4.41047 | opp_overlap 2608195 2608196, overlap 2608196 ATTTTGTAATCAAAA GTTACA GCTG TGTAAC TGTAATATTATTCTC CD2251 2608312 - 2608668 + | hypothetical protein TERM 2883 2608675 - 2608715 + T 88 -6.5 -5.46706 | gap 1, opp_overlap 2608680, overlap 2608680 AATAAATAACTAATA AAAAATGGATG-CAAATT GATATA AATTTGACATCCATTTTC TTTTTATTTTAAAGT TERM 2884 2608710 - 2608680 - T 88 -6.4 -5.57396 | gap 1, opp_overlap 2608680 2608675 ATAACTAATAAAAAA TGGATG-CAAATT GATATA AATTTGACATCCA TTTTCTTTTTATTTT TERM 2885 2608680 - 2608710 + T 88 -6.4 -5.51078 | gap 1, opp_overlap 2608680, overlap 2608675 ATAACTAATAAAAAA TGGATG-CAAATT GATATA AATTTGACATCCA TTTTCTTTTTATTTT kamA 2610029 - 2608761 - | L-lysine 2,3-aminomutase CD2253 2611813 - 2610431 - | GntR family transcriptioanl regulator TERM 2886 2610980 - 2610967 - G 70 -5.3 -4.57073 | opp_overlap 2610965 2610967 TACCGTCTCTAAAAA TGCTA TTTA TAGCA TCTTCAATAATTATT CD2254 2611942 - 2612628 + | putative amino acid recemase TERM 2887 2612732 - 2612758 + T 95 -8.2 -5.24551 | opp_overlap 2612732 TATTGTAACAAAAAA GGATAGTATA ATTACCC TATACTATCC TTTTTCTTAATTTAA TERM 2888 2612758 - 2612732 - T 100 -8.9 -5.46657 | opp_overlap 2612732 TATTGTAACAAAAAA GGATAGTATAA TTACC CTATACTATCC TTTTTCTTAATTTAA CD2255 2614348 - 2612813 - | hypothetical protein TERM 2889 2615324 - 2615338 + G 72 -8.6 -3.0395 | overlap 2615337 AAATGGAGTTGGTGG CCTTGT GGC ACAAGG TCTTGGGACATCTAT TERM 2890 2615647 - 2615634 - g 83 -3.1 -5.67063 | TTTATGAGAAAAAAA GGTCT AATA AAACC TGAAGATTTAAAACT CD2256 2614623 - 2615672 + | putative PTS system, EIIC component TERM 2891 2615681 - 2615714 + T 76 -2.7 -5.93809 | gap 2, opp_overlap 2615681 TGTATAAATTAAAAA CTACTCCTTTGACTT ATATAA AAGT-AA-GGAGTAG TTTTTTTTATGAAAA CD2258 2616755 - 2615721 - | hypothetical protein CD2259 2617120 - 2616773 - | hypothetical protein TERM 2892 2618684 - 2618694 + G 75 -4 -5.20606 | TACAAGTCTTCATAG TGAT ACC ATCA TTTTTATTGATATTT CD2260 2617378 - 2618760 + | proton-dependent oligopeptide transporter TERM 2893 2618831 - 2618783 - T 100 -12.2 -4.75309 | gap 1, opp_overlap 2618785 2618787 2618797, overlap 2618785 2618797 TTAAAGTTAATAAAA TATACAATAAAAAATCGAGGCAT TATA ATACCTCGA-TTTTTATTGTATC TAGTACAAACTATAT TERM 2894 2618829 - 2618785 - T 100 -14.8 -3.98064 | gap 1, opp_overlap 2618785 2618787 2618797, overlap 2618783 2618797 AAAGTTAATAAAATA TACAATAAAAAATCGAGGCAT TATA ATACCTCGA-TTTTTATTGTA TCTAGTACAAACTAT TERM 2895 2618785 - 2618829 + T 91 -12.6 -2.78935 | gap 1, opp_overlap 2618783 2618785 2618797, overlap 2618787 2618797 AAAGTTAATAAAATA TACAATAAAAAATCGAGGCAT TATA ATACCTCGA-TTTTTATTGTA TCTAGTACAAACTAT TERM 2896 2618787 - 2618827 + T 85 -10.8 -2.94218 | gap 1, opp_overlap 2618785 2618783 2618797, overlap 2618785 2618797 AGTTAATAAAATATA CAATAAAAAATCGAGGCAT TATA ATACCTCGA-TTTTTATTG TATCTAGTACAAACT TERM 2897 2618818 - 2618797 - T 100 -9.5 -5.62045 | opp_overlap 2618797 2618787 2618785, overlap 2618785 2618783 ATATACAATAAAAAA TCGAGGCAT TATA ATACCTCGA TTTTTATTGTATCTA TERM 2898 2618797 - 2618818 + T 87 -7.3 -5.27206 | opp_overlap 2618785 2618783 2618797, overlap 2618787 2618785 ATATACAATAAAAAA TCGAGGCAT TATA ATACCTCGA TTTTTATTGTATCTA CD2261 2620634 - 2618841 - | peptidase TERM 2899 2620182 - 2620161 - G 70 -3.8 -5.12971 | AACATCTAATAAAAA TGCTTTAC TATCTG ATAAAGCA GGTCTATCTGGCCAT TERM 2900 2620568 - 2620581 + g 85 -3.9 -5.8187 | opp_overlap 2620568 CAGAAGATGGAATCA TATAG GCAT CTATA TTTTTTTCTTCCATA TERM 2901 2620845 - 2620804 - R 78 -8.3 -3.9941 | opp_overlap 2620806 2620843, overlap 2620806 2620811 TTTTTCATAATCAAA GAGGAAATTACATTTAATT TTAT ATTTAAATGTAACTTCCTT TATTTAAAGTAATTC TERM 2902 2620806 - 2620843 + r 86 -8.7 -4.44448 | opp_overlap 2620806 2620804 2620811 TTTCATAATCAAAGA GGAAATTACATTTAATT TTAT ATTTAAATGTAACTTCC TTTATTTAAAGTAAT TERM 2903 2620843 - 2620806 - R 95 -10.9 -3.5891 | opp_overlap 2620806, overlap 2620804 2620811 TTTCATAATCAAAGA GGAAATTACATTTAATT TTAT ATTTAAATGTAACTTCC TTTATTTAAAGTAAT TERM 2904 2620873 - 2620889 + r 78 -4.5 -5.62288 | opp_overlap 2620873, overlap 2620863 TTCATTTATTTACAA TAATTCG TCA TGAATTA TTTTTCTTTTGTTAG CD2262 2622278 - 2620887 - | proton-dependent oligopeptide transporter TERM 2905 2622688 - 2622642 - R 100 -15 -4.19746 | gap 1, opp_overlap 2622622 2622642 2622647, overlap 2622647 TTTATTGCAAAATAA TAAAAGCTATTTTATACTCTC TATATT GAGAGTA-AAAATAGCTTTTA TCCATACAGTTAATT TERM 2906 2622647 - 2622683 + r 100 -10.5 -4.42653 | gap 1, opp_overlap 2622642 2622647, overlap 2622622 2622642 TGCAAAATAATAAAA GCTATTTTATACTCTC TATATT GAGAGTA-AAAATAGC TTTTATCCATACAGT TERM 2907 2622683 - 2622647 - R 100 -10.5 -5.093 | gap 1, opp_overlap 2622622 2622642 2622647, overlap 2622642 TGCAAAATAATAAAA GCTATTTTATACTCTC TATATT GAGAGTA-AAAATAGC TTTTATCCATACAGT CD2263 2623874 - 2622732 - | putative protein export chaperone TERM 2908 2623067 - 2623079 + g 71 -3.3 -5.18561 | overlap 2623068 GAGTAGCAAAATCTT CCCCA GCT TGGGC TTTTTTAAGTATTTC CD2264 2625028 - 2623985 - | hypothetical protein TERM 2909 2624538 - 2624562 + g 76 -5.1 -5.02231 | ACCCACTCTTCTTTA GTATACAAGTT TAT AGCTTTTATAC TTTTTCCTCTTTTTA TERM 2910 2625471 - 2625523 + r 83 -9.6 -3.55487 | opp_overlap 2625471 TATAAATAACAAAAA TGGATTTAATTAATCATATAGA CCTTGAAAC TCAACATGATTAATTAAATCCA TTATAATTAATATAA TERM 2911 2625523 - 2625471 - R 100 -13.9 -5.42164 | opp_overlap 2625471 TATAAATAACAAAAA TGGATTTAATTAATCATATAGACCT TGA AACTCAACATGATTAATTAAATCCA TTATAATTAATATAA CD2265 2626113 - 2625550 - | hypothetical protein CD2266 2627661 - 2626135 - | putative oxidoreductase TERM 2912 2626244 - 2626259 + g 81 -4.7 -5.49234 | opp_overlap 2626238 2626246 AATCTAGAACCATGA CATGG ACAGTC CCATG TTTTTTCTTCACTGT TERM 2913 2627896 - 2627933 + r 73 -3.5 -5.59655 | gap 1, opp_overlap 2627895 2627898, overlap 2627898 TTCAATACATAAGAT GATGTTGTGCTAACAATT ATA AACTGTTAGC-CACCAAC TTTTTTATTGATTTA TERM 2914 2628268 - 2628282 + r 75 -8.6 -3.57119 | opp_overlap 2628258, overlap 2628258 TCAAATGGGCTATAG CTCCAA TTA TTGGAG TTTGAGGACTATATA TERM 2915 2629453 - 2629414 - R 72 -3.8 -5.38839 | gap 1, overlap 2629425 TATATAAAAATAAAA GACTGTCAAGATAACAATT ACA AATCGTTATAT-AACAGCC TCATAAAATCCTTAT CD2269 2631460 - 2629541 - | PTS system, IIBC component TERM 2916 2630618 - 2630630 + g 72 -7.7 -3.58801 | opp_overlap 2630618 2630617 TCCTCCATGGTAAAT TGGAG CAT CTCCA TTTACAGCCTTGTCT fruK 2632414 - 2631497 - | putative 1-phosphofructokinase TERM 2917 2632036 - 2632054 + g 74 -3.2 -5.37043 | ATATTAAAATATCAT CTTGAT TTAGCTT ATCAAG TTTTTTATATAAAGT TERM 2918 2632484 - 2632519 + r 74 -4.9 -5.23765 | opp_overlap 2632473 2632491, overlap 2632491 AATATCCTTGAAAGT CAAAAAATTTCTCTT AATTAA AAGAGAAATTTATCG TTTTTATCTTATTTA TERM 2919 2632512 - 2632491 - R 80 -6 -5.22039 | opp_overlap 2632491 2632484 TTGAAAGTCAAAAAA TTTCTCTT AATTAA AAGAGAAA TTTATCGTTTTTATC TERM 2920 2632491 - 2632512 + r 70 -6 -4.2928 | opp_overlap 2632491, overlap 2632484 TTGAAAGTCAAAAAA TTTCTCTT AATTAA AAGAGAAA TTTATCGTTTTTATC CD2271 2634359 - 2632581 - | putative transcriptional antiterminator CD2272 2635111 - 2634371 - | hypothetical protein TERM 2921 2636035 - 2636005 - g 74 -2 -5.61913 | AATAAATATAAAAAA TAGCAGTATTAA TGCTCTT TTAAAACTACTA AAAGCCTATGCAATA CD2273 2635385 - 2636446 + | hypothetical protein CD2274 2637853 - 2636600 - | hypothetical protein CD2275 2640077 - 2637957 - | DNA topoisomerase III TERM 2922 2639150 - 2639168 + g 71 -4.6 -4.78149 | opp_overlap 2639150 TAGGATAAGTAAGTA CTTTATGA TGT TCATACAG TTTTTGCATTATAGA TERM 2923 2640603 - 2640616 + H 70 -3.9 -5.18643 | opp_overlap 2640603 TATCTACCAAAAACA GTATT TACT AATAC TTTTATTTTGGTTGC TERM 2924 2640651 - 2640673 + H 93 -7.1 -5.80364 | TAGTGTACATCCAGA GCTGAATCT TTTTT AGATTTAGC TTTTTTTATTACACT TERM 2925 2641048 - 2641062 + G 72 -4.2 -5.1287 | CAGCTATCAAAGCTG GTGGAC CTG GTGCAC TTTTTTGGATGTGGA CD2276 2640783 - 2642150 + | putative sodium:solute symporter TERM 2926 2642159 - 2642201 + T 76 -4.5 -5.40474 | gap 2, opp_overlap 2642159 TGCATAAATAAAAAG TATAGAATCCCAA-GTCA-AT TTT ATATGGCTTTCGGATTCTATA TTTTTTTGAAAAAAT CD2277 2642970 - 2642323 - | sugar phosphate aldolase araD 2643674 - 2642988 - | L-ribulose-5-phosphate 4-epimerase CD2279 2644831 - 2643773 - | putative sugar dehydrogenase CD2280 2646581 - 2645175 - | PTS system, IIC component TERM 2927 2645231 - 2645242 + g 72 -4.4 -5.05116 | opp_overlap 2645231 GTTTTTCTAAATAAT CAAG AATA CTTG TTTTGTTCTTTCTAA TERM 2928 2645590 - 2645570 - G 93 -11.3 -3.52234 | CCAATAAATCCACAA CTGGTAATA CCT TATTACCAG GAAGTACCATAGCTA TERM 2929 2646345 - 2646321 - G 76 -8.7 -3.45404 | overlap 2646313 TGAAAATGCAACCAA TGATGTTGCTT GCC AACCAACATCA AAAACTGGTAGGTTT TERM 2930 2646713 - 2646741 + r 72 -9.1 -2.54523 | opp_overlap 2646715, overlap 2646718 AATATTAGCTTATTA TAGTATCTAAATC ATT GATTTAAATACTA TAAATTCACGTCTCC TERM 2931 2646739 - 2646715 - R 76 -9.5 -2.80113 | opp_overlap 2646713 2646718 TATTAGCTTATTATA GTATCTAAATC ATT GATTTAAATAC TATAAATTCACGTCT CD2281 2647064 - 2646762 - | PTS system, IIB component TERM 2932 2647150 - 2647160 + r 73 -2.6 -5.72622 | ACTTACTTTGATTGT TTAA ATT TTAA TTTTTTATTTATAAA CD2282 2647651 - 2647187 - | PTS system, IIBC component CD2283 2650569 - 2647666 - | putative sigma-54 interacting transcription antiterminator TERM 2933 2650706 - 2650730 + H 75 -8.1 -3.56544 | overlap 2650697 2650702 AGTATTTACATTTTG TATATTTAGTA ATT TACTAAATGTA TTAGTTATTCATAAT CD2284 2651047 - 2651469 + | hypothetical protein TERM 2934 2651774 - 2651752 - f 73 -5.6 -4.8236 | overlap 2651753 TATTTAAAAAAACAA TCCCTCTTTA TGA TAAAGAAGGT ATAAAAATTATAGGA TERM 2935 2651773 - 2651753 - f 79 -9.1 -3.47789 | overlap 2651752 ATTTAAAAAAACAAT CCCTCTTTA TGA TAAAGAAGG TATAAAAATTATAGG TERM 2936 2651840 - 2651818 - f 70 -3.5 -5.30339 | opp_overlap 2651819 ATTAAAAGACAAAAA CTAATAGAA TTATT TCCTATCAG TTTTTATTTGTATCT TERM 2937 2651903 - 2651887 - f 73 -2.3 -5.76237 | TAGATAAAGAAAAAA TCAAATT AAT AATGTGA GGTGAAAACTTATGC CD2285 2651915 - 2653300 + | GntR family transcriptional regulator TERM 2938 2653307 - 2653332 + F 100 -7 -6.44931 | opp_overlap 2653301, overlap 2653304 2653309 AAAAAATAATTGTAT TGCACACAAT ATTTTA ATTGTGTGTA TTTTTTTTTGTTGTT TERM 2939 2653309 - 2653330 + F 81 -7.4 -4.81831 | opp_overlap 2653301, overlap 2653304 2653307 AAAATAATTGTATTG CACACAAT ATTTTA ATTGTGTG TATTTTTTTTTGTTG CD2286 2653578 - 2654279 + | hypothetical protein CD2287 2654272 - 2654595 + | hypothetical protein TERM 2940 2654709 - 2654687 - T 100 -9.2 -5.64421 | opp_overlap 2654687 ATTTTAAATAAAAAA CAGAGTGACT TAA AGTTACTCTG TTTTTACTCTTCATT TERM 2941 2654687 - 2654709 + T 100 -11.4 -4.90136 | opp_overlap 2654687 ATTTTAAATAAAAAA CAGAGTGACT TAA AGTTACTCTG TTTTTACTCTTCATT CD2288 2656870 - 2654801 - | two-component sensor histidine kinase TERM 2942 2656213 - 2656164 - G 74 -8.3 -3.63305 | gap 1, opp_overlap 2656164 2656165, overlap 2656165 2656170 CATATAATTGCTAAA CTTAAACTAGCTACAAAAAATAAT CTT ACT-TTTTCTGTAGCTTGTTTAAA TATTTGAAAATTAGT TERM 2943 2656212 - 2656165 - G 76 -9.6 -2.77501 | gap 1, opp_overlap 2656165 2656164, overlap 2656164 2656170 ATATAATTGCTAAAC TTAAACTAGCTACAAAAAATAAT CTT ACT-TTTTCTGTAGCTTGTTTAA ATATTTGAAAATTAG TERM 2944 2656467 - 2656489 + g 81 -6.4 -5.06052 | GTATAAAATACTCCT GTGTATGT ATTAATA ACATACAC TTTTATATTTTTTAG CD2289 2657749 - 2657057 - | two-component system response regulator TERM 2945 2657664 - 2657694 + g 77 -7.9 -4.05033 | opp_overlap 2657668 CCATCATATGCTTTA TATATTTTAAATC CTTCT GATTTAAGATATA TTTCTATCGAATCAA TERM 2946 2658340 - 2658283 - R 95 -12 -3.33315 | gap 1, opp_overlap 2658283 2658286 2658290 2658295, overlap 2658286 2658290 2658295 TTAACATGTTCAGAA TAATAAACAAAATGAAGGTA-GAAA AAGTTATAA TTTCATACCTTCATTTTATTTATTA TGTATCAATTTGTCA TERM 2947 2658283 - 2658340 + r 82 -9.8 -2.99546 | gap 1, opp_overlap 2658283 2658286 2658290 2658295, overlap 2658286 2658290 2658295 TTAACATGTTCAGAA TAATAAACAAAATGAAGGTA-GAAA AAGTTATAA TTTCATACCTTCATTTTATTTATTA TGTATCAATTTGTCA TERM 2948 2658337 - 2658286 - R 84 -9.3 -3.80174 | gap 1, opp_overlap 2658286 2658283 2658290 2658295, overlap 2658283 2658290 2658295 ACATGTTCAGAATAA TAAACAAAATGAAGGTA-GAAA AAGTTATAA TTTCATACCTTCATTTTATTTA TTATGTATCAATTTG CD2290 2658735 - 2658361 - | putative regulatory protein TERM 2949 2658937 - 2658902 - H 76 -9.2 -2.79915 | opp_overlap 2658909, overlap 2658905 2658909 ACTCATTTTAGGATA TTATGAAGTTAACTTC ACAT GAAGTTAGCTTCATAT AGAAAGAGGTTATGG TERM 2950 2658934 - 2658905 - H 83 -10.9 -2.66634 | opp_overlap 2658909, overlap 2658902 2658909 CATTTTAGGATATTA TGAAGTTAACTTC ACAT GAAGTTAGCTTCA TATAGAAAGAGGTTA TERM 2951 2658909 - 2658930 + H 72 -8.1 -3.25823 | opp_overlap 2658909 2658905 2658902 TTAGGATATTATGAA GTTAACTTC ACAT GAAGTTAGC TTCATATAGAAAGAG CD2291 2658954 - 2659187 + | putative transcriptional regulator CD2292 2659171 - 2659584 + | hypothetical protein TERM 2952 2659800 - 2659778 - g 81 -4.8 -5.42514 | GGAGAAATGAAAAAA GCACTCCCCC AGC AAGAGAATGC TTAGTTATAGCTATA TERM 2953 2659814 - 2659840 + G 100 -9.6 -5.9218 | opp_overlap 2659819 GCTTAGTTATAGCTA TAGAAGTGTATT GGT GGTACACTTCTA TTTTTTTATTATATC CD2293 2659603 - 2659899 + | hypothetical protein TERM 2954 2659981 - 2659953 - f 100 -7.5 -5.47399 | opp_overlap 2659956, overlap 2659956 TGAATTTCAAAAAAA TAAGCACTCTTTA TTA TAAGGAGTGCTTT GGTGTATGTTAATCT TERM 2955 2659978 - 2659956 - f 95 -9.2 -4.80853 | opp_overlap 2659956, overlap 2659953 ATTTCAAAAAAATAA GCACTCTTTA TTA TAAGGAGTGC TTTGGTGTATGTTAA TERM 2956 2659956 - 2659978 + F 100 -11.4 -3.93383 | opp_overlap 2659956 2659953 ATTTCAAAAAAATAA GCACTCTTTA TTA TAAGGAGTGC TTTGGTGTATGTTAA CD2294 2660182 - 2660499 + | hypothetical protein CD2295 2660635 - 2661099 + | hypothetical protein TERM 2957 2661123 - 2661092 - T 100 -13.2 -5.75599 | opp_overlap 2661092 2661095 GAAAGTATAAAAAAA GAAGGTAACAACCA ACTC TAGTTGCTACCTTC TAATCTATTTAACTA TERM 2958 2661092 - 2661123 + T 73 -8.8 -2.81535 | opp_overlap 2661092, overlap 2661095 GAAAGTATAAAAAAA GAAGGTAACAACCA ACTC TAGTTGCTACCTTC TAATCTATTTAACTA CD2295A 2661343 - 2661128 - | putative surface protein (partial) CD2296 2662035 - 2661640 - | hypothetical protein CD2297 2662453 - 2662088 - | putative phage-related regulatory protein TERM 2959 2662261 - 2662289 + g 100 -15.5 -4.29326 | opp_overlap 2662259 2662258 CAGCATTATTAAGTT TTCGGATGTCAGT ATT ACTGATATCCGAA TTTCTTAACTTTACA TERM 2960 2662529 - 2662568 + r 78 -4.3 -5.61689 | CGATAGTATACATCA TAGGGGTTACTCAAACT TTGGTC GGTGGGAGTGACCCTTA TTTTTTATTCCTTTT CD2298 2662881 - 2662573 - | hypothetical protein TERM 2961 2662761 - 2662819 + g 100 -28 -4.88129 | opp_overlap 2662797 TTGCTATTTTATTCA CCTCTTTTCTGTAACTCGTTACATTAAT AAT AATATTGTAACGAGTTACAGAAAAGAGG TTTTTACTAATTTTT TERM 2962 2662878 - 2662899 + g 85 -7.3 -4.88895 | opp_overlap 2662878 TTGAGCAGAATAAAA GCACCTACA TATT TGTAAGTGC TTTCTTTGTTTATTT TERM 2963 2662899 - 2662878 - G 100 -9.5 -4.81212 | opp_overlap 2662878 TTGAGCAGAATAAAA GCACCTACA TATT TGTAAGTGC TTTCTTTGTTTATTT TERM 2964 2664121 - 2664100 - R 89 -9.5 -4.35524 | opp_overlap 2664100 2664114 TTTGTAAATTTAAAA GCACCTACA TACT TGTAAGTGC TTACTATATTATCTA TERM 2965 2664252 - 2664266 + r 83 -3.6 -5.97979 | opp_overlap 2664254, overlap 2664254 ACTCTGTTTTGAATG TAGTTA TTA TAACTG TTTTTTTCTTGTTCT TERM 2966 2664435 - 2664459 + r 77 -5.1 -5.44721 | opp_overlap 2664435 TCTTTTGAATGAAAC TTAAAGTACGC CTT GCTTATTTTAA TTTTTTTAAGATCAT TERM 2967 2665241 - 2665253 + r 72 -4.9 -5.06451 | TAGAGTGAAGTTCTA TAACT GAA AGTTA TTTTTTACGATGATA CD2299A 2665403 - 2665251 - | hypothetical protein TERM 2968 2665293 - 2665315 + g 81 -5.6 -5.25735 | TATATCAATCTTTAA GTCACTCT TTGCGGT AGAGTGGC TTTTTACTTTTTTGA TERM 2969 2665564 - 2665601 + r 71 -5.7 -4.69048 | opp_overlap 2665572, overlap 2665566 2665572 ATTTTCTATTTTTTC AATAAAAAGCACCTACA TATT TGTAAGTGCTTTCTATG TTTATTTAGTTTTAT TERM 2970 2665566 - 2665599 + r 78 -8.3 -3.92649 | opp_overlap 2665572, overlap 2665564 2665572 TTTCTATTTTTTCAA TAAAAAGCACCTACA TATT TGTAAGTGCTTTCTA TGTTTATTTAGTTTT TERM 2971 2665572 - 2665593 + r 75 -7.3 -4.34932 | opp_overlap 2665572, overlap 2665566 2665564 TTTTTTCAATAAAAA GCACCTACA TATT TGTAAGTGC TTTCTATGTTTATTT TERM 2972 2665593 - 2665572 - R 100 -9.5 -5.06414 | opp_overlap 2665566 2665564 2665572 TTTTTTCAATAAAAA GCACCTACA TATT TGTAAGTGC TTTCTATGTTTATTT CD2300 2666009 - 2665677 - | hypothetical protein CD2301 2666305 - 2666036 - | hypothetical protein CD2301A 2666600 - 2666439 - | phage protein TERM 2973 2666699 - 2666713 + r 90 -10 -3.69283 | CTCCACAGGCCATCC CCGTAG TTC CTACGG TTCTTACATAAGTTA tlpB' 2667229 - 2666726 - | transposase-like protein B TERM 2974 2667513 - 2667456 - R 70 -7.6 -3.33315 | gap 1, opp_overlap 2667456 2667459 2667469, overlap 2667459 TTAACATGTTCAGAA TAATAAACAAAATGAAGGTA-GAAA AAGTTATAA TTTCATACCTTCTTTTTATTTATTA TGTATCAATTTGTCA TERM 2975 2667469 - 2667500 + r 70 -2.5 -5.50774 | gap 1, opp_overlap 2667459 2667456, overlap 2667459 2667456 AATAATAAACAAAAT GAAGGTA-GAAA AAGTTATAA TTTCATACCTTC TTTTTATTTATTATG CD2303 2667918 - 2667718 - | putative repressor (partial) CD2304 2668391 - 2668014 - | putative regulatory protein CD2305 2669195 - 2669689 + | putative pilin protein TERM 2976 2669790 - 2669815 + T 100 -7.7 -5.60689 | opp_overlap 2669792 2669795, overlap 2669792 GCTTAGTTATAACTA CAGAAGTGTAT TGGC ATACACTTCTA TTTTTTATTATATCA TERM 2977 2669792 - 2669813 + T 100 -10.3 -4.42868 | opp_overlap 2669792 2669795, overlap 2669790 TTAGTTATAACTACA GAAGTGTAT TGGC ATACACTTC TATTTTTTATTATAT TERM 2978 2669813 - 2669792 - T 85 -10.3 -2.97245 | opp_overlap 2669792 2669790, overlap 2669795 TTAGTTATAACTACA GAAGTGTAT TGGC ATACACTTC TATTTTTTATTATAT TERM 2979 2669831 - 2669871 + T 80 -9.4 -3.14548 | opp_overlap 2669828 2669831 2669833, overlap 2669836 TTTTTTATTATATCA CATAATTTAAAAATACCT ATTCA AGTTGTTTTTAAATTATG TTGAGTAATATTCTT TERM 2980 2669947 - 2669919 - T 88 -6.9 -5.47399 | opp_overlap 2669922, overlap 2669922 TGAATTTCAAAAAAA TAAGTACTCTTTA TAG TAAAAAGTACTTT AGTGTATGTTAATGT TERM 2981 2669944 - 2669922 - T 88 -8.6 -4.80853 | opp_overlap 2669922, overlap 2669919 ATTTCAAAAAAATAA GTACTCTTTA TAG TAAAAAGTAC TTTAGTGTATGTTAA CD2305A 2670467 - 2670228 - | transposase (partial) CD2306 2670968 - 2670681 - | hypothetical protein TERM 2982 2671055 - 2671005 - H 100 -13.1 -4.33182 | opp_overlap 2671012, overlap 2671007 2671012 CTATTGACAAAAGAA TATAAAAGAGATATATTTGTATC ATAAA GATATAAATATATCTCTTTTAAA ATTACTAAGGAGGAT TERM 2983 2671053 - 2671007 - H 100 -15.7 -3.76183 | opp_overlap 2671012, overlap 2671005 2671012 ATTGACAAAAGAATA TAAAAGAGATATATTTGTATC ATAAA GATATAAATATATCTCTTTTA AAATTACTAAGGAGG TERM 2984 2671012 - 2671048 + H 100 -13.4 -4.20696 | opp_overlap 2671007 2671005 2671012 CAAAAGAATATAAAA GAGATATATTTGTATC ATAAA GATATAAATATATCTC TTTTAAAATTACTAA TERM 2985 2671048 - 2671012 - H 100 -11.2 -4.88288 | opp_overlap 2671012, overlap 2671007 2671005 CAAAAGAATATAAAA GAGATATATTTGTATC ATAAA GATATAAATATATCTC TTTTAAAATTACTAA CD2307 2671076 - 2671426 + | hypothetical protein CD2308 2671428 - 2671628 + | putative transcriptional regulator TERM 2986 2671894 - 2671914 + F 81 -7 -4.73388 | ATGTCAGCCAGTTGC CAAAAAGA TATTT TCTTTTTG TTTTTCATGAAAGTT CD2309 2671951 - 2672127 + | hypothetical protein cspD 2672352 - 2672552 + | cold shock protein TERM 2987 2672572 - 2672587 + F 100 -7.6 -6.23545 | opp_overlap 2672572 TAGATTTTTCGGAAA GACTCT TTTA AGAGTC TTTTTTTTATTTACG TERM 2988 2672587 - 2672572 - f 72 -7.6 -3.54129 | opp_overlap 2672572 TAGATTTTTCGGAAA GACTCT TTTA AGAGTC TTTTTTTTATTTACG TERM 2989 2672897 - 2672869 - f 70 -3.4 -5.4505 | gap 1, opp_overlap 2672872 2672878, overlap 2672872 TTTGTTAATAAAAAA CAATTAAAACATA TCTA TATGTTTCAAT-G TTCTATTTTTTCACT TERM 2990 2672895 - 2672872 - f 76 -6.2 -4.81306 | opp_overlap 2672872 2672878, overlap 2672869 GTTAATAAAAAACAA TTAAAACATA TCTA TATGTTTCAA TGTTCTATTTTTTCA TERM 2991 2673441 - 2673417 - g 100 -13.7 -3.12668 | overlap 2673409 2673402 TGTCAAAGTTGAATA TAGCTATGCAG GTT CTGCACAGCTA ATAGCTCAAATTGAG TERM 2992 2673485 - 2673499 + G 75 -7.2 -4.15222 | GAGACGTATTTATTG TTGGTT CTG AACCAA TTTATTCAAAGGCCT CD2311 2673187 - 2673999 + | ABC transporter, substrate-binding protein0 modB 2674009 - 2674800 + | ABC transporter, permease protein TERM 2993 2675186 - 2675176 - g 82 -5.4 -5.48787 | AGAAGATATAAAAAA TAGG TAT CCTA AAAATTTAAGTGGAG CD2313 2674802 - 2675497 + | ABC transporter, ATP-binding protein CD2314 2675484 - 2676215 + | hypothetical protein TERM 2994 2676258 - 2676233 - f 72 -9.1 -2.55378 | opp_overlap 2676233, overlap 2676232 2676228 2676235 AATCATATCATCAAG GAGTACACAAA TATA TATGTGTACTC TTTAAATTTAAAAAG TERM 2995 2676233 - 2676258 + F 81 -9.1 -3.84451 | opp_overlap 2676233 2676232 2676228 2676235 AATCATATCATCAAG GAGTACACAAA TATA TATGTGTACTC TTTAAATTTAAAAAG TERM 2996 2676560 - 2676550 - g 76 -2.6 -5.64873 | overlap 2676543 TTTAAGAATAAAAAA TTTA CTA TAAA TAAATATAAAATTCT CD2315 2676529 - 2677329 + | hypothetical protein TERM 2997 2677383 - 2677411 + F 78 -6.8 -4.91109 | opp_overlap 2677391, overlap 2677387 ATTATTTGAGATTTT GTGATATAGCAC TTTTT GTGCTATACTAC TTTTTCTCATACAAC CD2316 2677869 - 2678585 + | two-component response regulator TERM 2998 2680030 - 2680019 - g 70 -4.4 -4.90455 | opp_overlap 2680019 ATATATCTAGAAAAA CAGA TGGC TCTG GTCTTGGTTTATCAA CD2317 2678566 - 2680143 + | two-component sensor histidine kinase TERM 2999 2680210 - 2680183 - T 100 -12.2 -3.97331 | opp_overlap 2680189 2680191, overlap 2680191 AAGTTATTTAAACAA GAAAAAAACCTC CTTA GAGGTCTTTTTC TAAATGTTGGGGTTT TERM 3000 2680202 - 2680191 - T 95 -5.8 -6.01369 | opp_overlap 2680191 2680189, overlap 2680183 TAAACAAGAAAAAAA CCTC CTTA GAGG TCTTTTTCTAAATGT TERM 3001 2680362 - 2680411 + T 75 -7.5 -3.95772 | gap 1, opp_overlap 2680376, overlap 2680408 ATAATCAGTTACATC TCTGTTACCTAAGATTACAATTTT GTA ATATTTGTAATCTTAGGT-ACAAA TTTACATTTGTTCTT CD2318 2681957 - 2680455 - | putative phosphoglucomutase rpe 2682732 - 2682067 - | putative ribulose-phosphate 3-epimerase rpiB1 2683208 - 2682762 - | ribose-5-phosphate isomerase 1 tkt' 2684303 - 2683383 - | transketolase tkt 2685118 - 2684306 - | transketolase CD2323 2686241 - 2685210 - | putative carbohydrate dehydrogenase gatD 2687293 - 2686241 - | putative galactitol-1-phosphate 5-dehydrogenase gatC 2688697 - 2687423 - | PTS system, galactitol-specific IIC component gatB 2689031 - 2688756 - | PTS system, galactitol-specific IIB component gatA 2689550 - 2689092 - | PTS system, galactitol-specific IIA component TERM 3002 2689620 - 2689632 + r 79 -4.8 -5.60993 | TAAAGCATGTTGTGT GCCA AAAAG TGGC TTTTTTTGTGAAACA TERM 3003 2690047 - 2690005 - R 88 -6.7 -5.5112 | gap 1 TTTACCAAGAAAAAA GCTAATTCTATAAAA-TCAT ATAA ATAAATTTCATAGAACTAGC CTTATATAGAGTAAT CD2328 2693078 - 2690139 - | putative sigma-54 interacting transcription antiterminator TERM 3004 2693158 - 2693131 - R 100 -10.7 -4.40237 | opp_overlap 2693131 2693134 TATTATACACCAAAA TAAGACTAGGC AAAATA GCCTAGCCTTA TTACTTAGAATTTCC TERM 3005 2693131 - 2693158 + r 74 -8.5 -3.3907 | opp_overlap 2693131, overlap 2693134 TATTATACACCAAAA TAAGACTAGGC AAAATA GCCTAGCCTTA TTACTTAGAATTTCC tal1 2693865 - 2693215 - | putative translaldolase xpt 2694501 - 2693929 - | xanthine phosphoribosyltransferase TERM 3006 2694415 - 2694437 + g 74 -8.6 -3.23419 | opp_overlap 2694408 2694414 2694415, overlap 2694408 2694407 2694414 AAAAGCTACATCAAT TTGATGGTTT AAA AAACTATCAA CTTTTAGTATATCAT TERM 3007 2694634 - 2694608 - R 100 -18.2 -5.36314 | TAAAATACTAAAAAA GCTCCTGTCTAT ATC ATAGACAGGAGC TTAAAATTCAAAGTA mtlD 2696042 - 2694891 - | mannitol-1-phosphate 5-dehydrogenase TERM 3008 2695895 - 2695905 + g 75 -4 -5.30448 | CTACATCTCTTATGT GTAT AGT ATAC TTTTTATCTTTGTTT mtlF 2696483 - 2696061 - | PTS system, mannitol-specific IIA component mtlR 2698651 - 2696513 - | putative transcription antiterminator mtlA 2700101 - 2698677 - | PTS system, mannitol-specific IIBC component guaB 2700697 - 2702196 + | inositol-5-monophosphate dehydrogenase TERM 3009 2702260 - 2702232 - T 72 -4.7 -5.04356 | gap 1, opp_overlap 2702232 2702250 TTAAACAATGAAAAA GAGACTTATCTC TATTTT GAGACA-GTCTC TTTTTATATTAGTAT TERM 3010 2702250 - 2702260 + T 78 -5.4 -5.13344 | opp_overlap 2702232 ACTTATCTCTATTTT GAGA CAG TCTC TTTTTATATTAGTAT CD2336 2703438 - 2702281 - | putative toxic anion resistance protein CD2337 2704473 - 2703553 - | hypothetical protein TERM 3011 2704645 - 2704592 - R 95 -11.6 -3.75884 | opp_overlap 2704602, overlap 2704594 2704597 2704602 2704607 TTTCAAATAAAGTAA TAGACTTAAATATAAGCATATTTT AAATTA AAAATATACTTATATTTAACTCCA TATAAAAATAAGAGA TERM 3012 2704643 - 2704594 - R 95 -12 -3.45242 | opp_overlap 2704602, overlap 2704592 2704597 2704602 2704607 TCAAATAAAGTAATA GACTTAAATATAAGCATATTTT AAATTA AAAATATACTTATATTTAACTC CATATAAAAATAAGA TERM 3013 2704640 - 2704597 - R 86 -12.3 -2.5507 | opp_overlap 2704602, overlap 2704594 2704592 2704602 2704607 AATAAAGTAATAGAC TTAAATATAAGCATATTTT AAATTA AAAATATACTTATATTTAA CTCCATATAAAAATA TERM 3014 2704635 - 2704602 - R 73 -7.8 -3.77177 | opp_overlap 2704602, overlap 2704597 2704594 2704592 2704607 AGTAATAGACTTAAA TATAAGCATATTTT AAATTA AAAATATACTTATA TTTAACTCCATATAA TERM 3015 2704654 - 2704692 + r 100 -7.7 -5.38958 | opp_overlap 2704654 AACTCCATATAAAAA TAAGAGAACTTAACTTT AATTA AAATTTAAGTTCCCTTA TTTTTATTTGTACAT TERM 3016 2704692 - 2704654 - R 100 -9.9 -4.98522 | opp_overlap 2704654 AACTCCATATAAAAA TAAGAGAACTTAACTTT AATTA AAATTTAAGTTCCCTTA TTTTTATTTGTACAT abfH 2705878 - 2704760 - | NAD-dependent 4-hydroxybutyrate dehydrogenase abfT 2707205 - 2705898 - | 4-hydroxybutyrate CoA transferase TERM 3017 2705989 - 2705999 + g 72 -5.4 -4.72729 | overlap 2705984 AAATTTCTTGCTCTT TCTC TAA GAGA TTTTCCTTTTAATTC CD2340 2707504 - 2707229 - | hypothetical protein abfD 2709135 - 2707639 - | gamma-aminobutyrate metabolism dehydratase/isomerase TERM 3018 2708480 - 2708455 - G 77 -7.7 -4.17701 | gap 1, overlap 2708457 2708458 2708478 TCCATAAATCATAAA CA-CTCCTTCAG CAT CTGAAGGAACTG CAAATGATACAGCGT TERM 3019 2708477 - 2708457 - G 85 -10.5 -3.67823 | overlap 2708455 2708458 CATAAATCATAAACA CTCCTTCAG CAT CTGAAGGAA CTGCAAATGATACAG TERM 3020 2708476 - 2708458 - G 89 -11.8 -2.79609 | overlap 2708457 2708455 ATAAATCATAAACAC TCCTTCAG CAT CTGAAGGA ACTGCAAATGATACA TERM 3021 2708908 - 2708891 - G 71 -7.1 -3.72695 | ACTTTTTTTATCAAA TCATCAA CACT TTGATGA AGATGACCAAATCTA TERM 3022 2709265 - 2709312 + r 100 -14.7 -5.38951 | opp_overlap 2709240 2709267 2709278, overlap 2709267 TTAATTTATGTCTTA AATTCATTCTAAATTAAAGTA TATTCC TACTTTAATTTAGAATGAATA TTTTTTGTCTAAATT TERM 3023 2709267 - 2709310 + r 100 -17.3 -4.31943 | opp_overlap 2709240 2709267 2709278, overlap 2709265 AATTTATGTCTTAAA TTCATTCTAAATTAAAGTA TATTCC TACTTTAATTTAGAATGAA TATTTTTTGTCTAAA TERM 3024 2709310 - 2709267 - R 100 -17.3 -3.5594 | opp_overlap 2709265 2709267, overlap 2709240 2709278 AATTTATGTCTTAAA TTCATTCTAAATTAAAGTA TATTCC TACTTTAATTTAGAATGAA TATTTTTTGTCTAAA sucD 2710719 - 2709328 - | succinate-semialdehyde dehydrogenase (NAD(P)+) cat1 2712294 - 2710750 - | succinyl-CoA:coenzyme A transferase CD2344 2713679 - 2712321 - | hypothetical protein TERM 3025 2712459 - 2712422 - G 78 -9.3 -3.23216 | gap 1, opp_overlap 2712427 2712431, overlap 2712425 2712431 GGTCATCACTATCAA GAGCATCAACAGCAGCTC CAA GACCTGGTGTTGATG-TC ATACCACCACAGACA TERM 3026 2712457 - 2712425 - G 89 -12.1 -2.50492 | opp_overlap 2712427 2712431, overlap 2712422 2712431 CATCACTATCAAGAG CATCAACAGCAGCTC CAA GACCTGGTGTTGATG TCATACCACCACAGA TERM 3027 2712427 - 2712455 + g 71 -8.9 -2.78384 | opp_overlap 2712425 2712422 2712431, overlap 2712431 TCACTATCAAGAGCA TCAACAGCAGCTC CAA GACCTGGTGTTGA TGTCATACCACCACA TERM 3028 2712662 - 2712680 + g 71 -7.6 -3.43097 | overlap 2712661 ACACTAGCCCTATTT GTTTTAAA ATA TTTAAAAC CTTTTCTTCCATTCT TERM 3029 2713878 - 2713892 + H 73 -4.4 -5.1675 | TTAACAATTTAATTG TAAAAA TAA TTTTTA TTTTTTAATAGATAA TERM 3030 2714417 - 2714404 - g 76 -5.3 -5.1675 | TGATTTAGGAAAAAA GAGAA AAGC TTCTC TCAAAATAGGTATTC CD2345 2714141 - 2715013 + | LysR family regulatory protein CD2346 2715811 - 2715200 - | hypothetical protein TERM 3031 2715863 - 2715826 - R 81 -7.3 -4.77165 | gap 1 CCTCTCACAATAAAA TTAAGCCCTCTTTAC-TA TAA TATGTAAATAGAGCTTAA TAGTGAGATTATGTT CD2347 2716991 - 2715912 - | putative Xaa-Pro dipeptidase TERM 3032 2717241 - 2717281 + r 81 -8.7 -3.98913 | opp_overlap 2717241, overlap 2717244 GATATAAAATAAAAA GAACATATAATTATAAT CAATAAA ATTATAACTATATGTTC TTATTTACATATAAA TERM 3033 2717281 - 2717241 - R 100 -11.6 -5.58522 | opp_overlap 2717241 2717244 GATATAAAATAAAAA GAACATATAATTATAATC AATAA AATTATAACTATATGTTC TTATTTACATATAAA grdD 2718450 - 2717305 - | glycine/sarcosine/betaine reductase complex component C alpha subunit grdC 2719993 - 2718461 - | glycine/sarcosine/betaine reductase complex component C beta subunit TERM 3034 2720116 - 2720171 + r 82 -4.4 -5.76633 | gap 1, opp_overlap 2720124, overlap 2720119 2720120 2720122 ATGTATTTTGGCATT TTTTA-AGATTTCATGAATGAATAACT CCA ATTTATCCATTCATGAAATCTATATTA TTTTTTTGTGTATAG TERM 3035 2720119 - 2720168 + r 100 -10.5 -4.92669 | gap 1, opp_overlap 2720124, overlap 2720116 2720120 2720122 TATTTTGGCATTTTT TA-AGATTTCATGAATGAATAACT CCA ATTTATCCATTCATGAAATCTATA TTATTTTTTTGTGTA TERM 3036 2720120 - 2720166 + r 100 -11.2 -4.04185 | opp_overlap 2720124, overlap 2720119 2720116 2720122 ATTTTGGCATTTTTT AAGATTTCATGAATGAATAACT CCA ATTTATCCATTCATGAAATCTA TATTATTTTTTTGTG TERM 3037 2720122 - 2720164 + r 100 -13.8 -3.56403 | opp_overlap 2720124, overlap 2720120 2720119 2720116 TTTGGCATTTTTTAA GATTTCATGAATGAATAACT CCA ATTTATCCATTCATGAAATC TATATTATTTTTTTG TERM 3038 2720162 - 2720124 - R 93 -12.8 -3.03124 | opp_overlap 2720122 2720120 2720119 2720116 TGGCATTTTTTAAGA TTTCATGAATGAATAACT CCA ATTTATCCATTCATGAAA TCTATATTATTTTTT grdB 2721559 - 2720249 - | glycine reductase complex component B gamma subunit TERM 3039 2720292 - 2720302 + g 72 -5.4 -4.82901 | opp_overlap 2720292, overlap 2720287 ACTTCTGTAGTTAAA GCAT TTA ATGC TTTTTCTACAAGGCC TERM 3040 2720449 - 2720460 + g 88 -5.8 -5.61913 | opp_overlap 2720449 TACACATATGAACTA CTGG AAGT CCAG TTTTTTCTATTTCTT grdA 2722064 - 2721591 - | glycine/sarcosine/betaine reductase complex protein A TERM 3041 2722080 - 2722094 + r 70 -4.4 -5.08178 | overlap 2722091 AATAATCCTCCTTAT TATATT TCT AATATA TTTTTATATATCTAT grdE 2723462 - 2722176 - | glycine reductase complex component B alpha and beta subunits trxA2 2724048 - 2723731 - | thioredoxin trxB3 2725093 - 2724146 - | thioredoxin reductase grdX 2725560 - 2725189 - | putative glycine reductase complex component TERM 3042 2725642 - 2725609 - R 100 -10.5 -5.72622 | opp_overlap 2725611 TTGATAAATAAAAAA CAGGAAAAACAAATC TCCC AATTTGTCTTCCCTG TTAAAATCATTTTCA CD2358 2727800 - 2726106 - | putative oligoendopeptidase TERM 3043 2727085 - 2727096 + g 74 -3 -5.35459 | ACATATTTTAGTACT TGTT TTCT AACA TTTTTTATCATATAT CD2359 2728293 - 2729114 + | putative hydrolase CD2360 2729892 - 2729407 - | hypothetical protein CD2361 2730675 - 2729905 - | putative aliphatic sulfonate ABC transporter,ATP-binding protein CD2363 2731987 - 2731424 - | hypothetical protein CD2364 2732221 - 2731997 - | hypothetical protein TERM 3044 2732112 - 2732089 - G 72 -8.2 -3.28522 | opp_overlap 2732089 2732091, overlap 2732088 2732091 AATTTATTACAAAAC CAGAGGTATC ATCA GATACCCCTA TTCTTAATTTTCCTT TERM 3045 2732110 - 2732091 - G 73 -8.6 -3.20028 | opp_overlap 2732089 2732091, overlap 2732089 2732088 TTTATTACAAAACCA GAGGTATC ATCA GATACCCC TATTCTTAATTTTCC TERM 3046 2732169 - 2732159 - G 72 -2.6 -5.46698 | opp_overlap 2732159 TTCAAAATTAAAAAA TATT ATA AATA TACTTCCCAAAATAA CD2365 2733317 - 2732226 - | putative sulfonate ABC transporter,solute-binding lipoprotein TERM 3047 2732526 - 2732544 + g 70 -6 -4.20086 | overlap 2732530 ATATTTTGCAAATAT TTTAGCTG CTT CAGCTGGA TTTGTATATATATAT TERM 3048 2732612 - 2732622 + g 75 -4 -5.33405 | CTAAATCTGGATGTT CTTT TAT AAAG TTTTTGTTTAATGAG CD2366 2733810 - 2733352 - | hypothetical protein CD2367 2734888 - 2733803 - | putative permease CD2368 2735115 - 2734915 - | hypothetical protein TERM 3049 2735244 - 2735218 - R 84 -8.9 -4.21812 | opp_overlap 2735218 2735215 2735242 TTTTACTTAAAATAA TCCACAGAAAA TAAAT TTTTCTATGGA TTGTATCCTATACTA CD2369 2735594 - 2735262 - | hypothetical protein TERM 3050 2735820 - 2735782 - R 100 -18.6 -5.5604 | opp_overlap 2735773 2735782 TTAATGAATAAAAAA TAGACTCCTTAAATTTAT AAA ACAAATTTAAGGAGTCTA TTTTAATTAAGTTTA TERM 3051 2735782 - 2735820 + r 100 -16.4 -4.47271 | opp_overlap 2735782, overlap 2735773 TTAATGAATAAAAAA TAGACTCCTTAAATTTAT AAA ACAAATTTAAGGAGTCTA TTTTAATTAAGTTTA nadC 2736662 - 2735850 - | nicotinate-nucleotide pyrophosphorylase (carboxylating) nadB 2737968 - 2736667 - | L-aspartate oxidase nadA 2738895 - 2737981 - | quinolinate synthetase TERM 3052 2739786 - 2739823 + G 74 -7.1 -3.96252 | opp_overlap 2739798 TTTAAATATGAAATC GACTATAAATAATCCAG TTGT CTGGATAGTTTATGGAC TTATCTTTCTATATT TERM 3053 2739811 - 2739798 - g 72 -6.7 -4.11585 | opp_overlap 2739786 ATCGACTATAAATAA TCCAG TTGT CTGGA TAGTTTATGGACTTA CD2373 2739313 - 2740770 + | putative carbon starvation protein CD2374 2740993 - 2741421 + | hypothetical protein CD2375 2741481 - 2741789 + | hypothetical protein TERM 3054 2741834 - 2741881 + T 100 -11 -5.01732 | gap 1, opp_overlap 2741832 2741834 2741833 2741837 ATACAAAGCAAAATT GAACCTATCAAATAGATGTCTTT ATT AATGATGTCTATTT-ATAGGTTC TTTTTTAAAACAATT CD2376 2742958 - 2741936 - | hypothetical protein TERM 3055 2742071 - 2742057 - G 76 -3.6 -5.44638 | ATAATAAAAACAAAA CAAACT GGA AGTTTA GTTCTATTCGACATC CD2377 2743639 - 2743133 - | NUDIX-family protein TERM 3056 2743283 - 2743297 + g 70 -3.6 -5.09895 | CTGTAAAATAGCTTT GGATAT ATC ATATTC TTTTTTAACTAAGTA CD2378 2744403 - 2743699 - | hypothetical protein CD2379 2745688 - 2744618 - | butyrate kinase iorB 2746316 - 2745741 - | indolepyruvate oxidoreductase subunit B iorA 2748105 - 2746318 - | indolepyruvate oxidoreductase subunit CD2382 2749425 - 2748166 - | putative aspartate aminotransferase TERM 3057 2749659 - 2749614 - R 100 -10.1 -5.08011 | opp_overlap 2749618 AAAATTTGCAAAAAA GTAATGTTAATTTTTCTTAAC ACTT GTTTTAAAAAATTAACATTAC TTCAAAATAATTTAT CD2383 2751687 - 2749687 - | putative sigma-54 interacting regulatory protein TERM 3058 2750955 - 2750941 - G 71 -7.2 -3.74693 | opp_overlap 2750941 2750952 CTCCATTTTAGGAAA TACATC TAA GATGTA TTTATTAAGTGCACA TERM 3059 2750941 - 2750955 + g 77 -7.2 -4.20516 | opp_overlap 2750941, overlap 2750952 CTCCATTTTAGGAAA TACATC TAA GATGTA TTTATTAAGTGCACA CD2384 2753593 - 2751695 - | putative signaling protein TERM 3060 2752988 - 2752998 + g 70 -4 -4.88388 | opp_overlap 2752988 TAGACATTCAATTAA GTAT TCC ATAC TTTTTATAAAGTTAT CD2385 2755449 - 2753608 - | putative signaling protein TERM 3061 2754445 - 2754457 + g 71 -4.9 -4.73448 | TTCTATATTTTTTAT CATAT TTA ATATG TTTTTAGCTCTATCT CD2386 2755999 - 2755580 - | hypothetical protein TERM 3062 2755776 - 2755795 + g 71 -5.8 -4.37527 | opp_overlap 2755776 TGATATTCTAAAAAA GGAAAGAA TTTT TTCTTTTC TTTTACTCCTTCTAA TERM 3063 2755795 - 2755776 - G 70 -3.6 -5.07567 | opp_overlap 2755776 TGATATTCTAAAAAA GGAAAGAA TTTT TTCTTTTC TTTTACTCCTTCTAA TERM 3064 2756572 - 2756607 + H 100 -13.7 -5.59502 | opp_overlap 2756572 GACATAAACTTAAAA GCTATATATAGATTT CTTTAA AAATCTATATATAGC TTTTTTAATTTTTTC TERM 3065 2756607 - 2756572 - H 100 -14.4 -4.41177 | opp_overlap 2756572 GACATAAACTTAAAA GCTATATATAGATTTC TTTA AAAATCTATATATAGC TTTTTTAATTTTTTC CD2387 2756823 - 2757845 + | dehydrogenase CD2388 2758540 - 2757938 - | putative peptidoglycan-binding/hydrolysing protein CD2389 2759705 - 2758557 - | putative beta-lactamase inducer CD2390 2760072 - 2759698 - | putative beta-lactamase repressor CD2391 2761195 - 2760713 - | hypothetical protein TERM 3066 2760821 - 2760809 - G 74 -6.3 -4.36366 | TATAAAATATACAAA TACTG GAA CAGTA AAATAAAATCCAAAT TERM 3067 2761296 - 2761267 - R 71 -8.2 -3.11568 | opp_overlap 2761270, overlap 2761265 2761264 2761270 TAAATAAAAATATTA TAATTAACAATA TATTTT TATTGTTAATTA TGCAAATAAAAAAGA TERM 3068 2761323 - 2761357 + r 80 -6 -5.1523 | opp_overlap 2761318 2761323 AAGAGTATAATAAAA GCCTTTAAAATA CATTTTTTTCT TATTTTAAAGGC TTTTTATATTCTACA TERM 3069 2761357 - 2761323 - R 76 -6 -4.83722 | opp_overlap 2761323, overlap 2761318 AAGAGTATAATAAAA GCCTTTAAAATA CATTTTTTTCT TATTTTAAAGGC TTTTTATATTCTACA CD2392 2762191 - 2761487 - | hypothetical protein TERM 3070 2762265 - 2762233 - R 83 -3.6 -5.93252 | gap 1 TGTAAAAATAAAAAA GCCTATAGAAATATT ATTA AATATCTCC-CAGGC TTTTATCCTTCCGTG TERM 3071 2762475 - 2762488 + r 78 -4.5 -5.52096 | TTATGGTGGCAAATG GGTGG CAAA TCACC TTTTTTATTACATTT CD2393 2763561 - 2762545 - | putative transglycosylase CD2394 2764195 - 2763689 - | putative DNA polymerase III, epsilon chain TERM 3072 2763796 - 2763806 + g 82 -5.4 -5.42514 | AAGCACAAGCTGTTT CAAG TTT CTTG TTTTTTCCTTTATAA CD2395 2765022 - 2764354 - | hypothetical protein TERM 3073 2764765 - 2764776 + g 71 -3 -5.24551 | TAAATCACCATTATC GTAT TTAA ATAC TTTTTCTTCCTTTAA TERM 3074 2765210 - 2765198 - R 72 -4.9 -4.9218 | TAGTTAGCATAAAAA TACTT ATA AAGTA TACTCAAATATTTCA TERM 3075 2765284 - 2765310 + r 100 -11.1 -5.32882 | opp_overlap 2765284 TTATATAAATAAAAA GATGAACTATA GTAAA TATAGTTCATC TTTTTTATAATAGTA TERM 3076 2765310 - 2765284 - R 100 -11.1 -5.42975 | opp_overlap 2765284 TTATATAAATAAAAA GATGAACTATA GTAAA TATAGTTCATC TTTTTTATAATAGTA CD2396 2765941 - 2765435 - | hypothetical protein TERM 3077 2766167 - 2766225 + r 83 -6.7 -5.16206 | opp_overlap 2766169 2766184, overlap 2766169 2766184 TTTTAAACCTAAAGC -AATATACAATAAAAAAATGTAGAAAG TAAGTAT CTCTCTACATTTTTT-ATTGTATATTA TTTTTATATTAATTT TERM 3078 2766169 - 2766222 + r 100 -10.9 -4.63863 | gap 1, opp_overlap 2766169 2766184, overlap 2766167 2766184 TTAAACCTAAAGCAA TATACAATAAAAAAATGTAGAAAG TAAGTAT CTCTCTACATTTTTT-ATTGTATA TTATTTTTATATTAA TERM 3079 2766222 - 2766169 - R 100 -13.1 -3.59293 | gap 1, opp_overlap 2766169 2766167 2766184, overlap 2766184 TTAAACCTAAAGCAA TATACAATAAAAAAATGTAGAAAG TAAGTAT CTCTCTACATTT-TTTATTGTATA TTATTTTTATATTAA TERM 3080 2766184 - 2766208 + r 70 -2.9 -5.62045 | opp_overlap 2766169 2766184, overlap 2766169 2766167 TATACAATAAAAAAA TGTAGAAAG TAAGTAT CTCTCTACA TTTTTTATTGTATAT TERM 3081 2766208 - 2766184 - R 88 -5.1 -5.9218 | opp_overlap 2766184 2766169 2766167, overlap 2766169 TATACAATAAAAAAA TGTAGAAAG TAAGTAT CTCTCTACA TTTTTTATTGTATAT CD2397 2767349 - 2766312 - | putative exonuclease CD2398 2768248 - 2767388 - | hypothetical protein CD2399 2768517 - 2768726 + | hypothetical protein cotJB2 2768726 - 2768992 + | putative spore-coat protein TERM 3082 2769219 - 2769231 + G 72 -7.7 -3.6336 | opp_overlap 2769219 2769216 GGTACAGAAGAACTA GCTCA CGT TGAGC TTATATGTACTATGG cotJC2 2769021 - 2769593 + | putative spore-coat protein CD2402 2771018 - 2769828 - | putative cell wall hydrolase TERM 3083 2771116 - 2771068 - R 100 -13 -4.14243 | opp_overlap 2771068, overlap 2771075 TATTTCACTTCAAAA TATAAAAGAAATAATCGACACT ATCAA AATATCAATTATTTCTTTTATA TTAATATTATTACAA TERM 3084 2771109 - 2771075 - R 78 -6.7 -4.89567 | opp_overlap 2771068, overlap 2771068 CTTCAAAATATAAAA GAAATAATCGACACT ATCAA AATATCAATTATTTC TTTTATATTAATATT dut 2771709 - 2771278 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 3085 2773422 - 2773446 + G 72 -8.8 -3.05066 | CTATAACAGAACTTG GGAAAAATTT AGTTG AAATTTTTCC TGTTAAAGACTTATT TERM 3086 2773765 - 2773791 + G 82 -11 -2.66812 | opp_overlap 2773764 2773763, overlap 2773763 TGATGAAAATCAATC TCTTGGCAAATG CCC CATTTGTCAAGG TGATGTACTAGAATT CD2404 2771822 - 2774050 + | putative DNA topoisomerase TERM 3087 2774061 - 2774115 + T 100 -24.3 -3.42366 | opp_overlap 2774061 2774066 2774070, overlap 2774066 2774070 ACTAAATATTCATAA GAAAAGAAATAGCAGTAGTATAATA ATCTA TATTATATTACTGCTATTTCTTTTC TTATGAAGTTTTAAC TERM 3088 2774115 - 2774061 - T 100 -22.1 -3.45602 | opp_overlap 2774061 2774066 2774070, overlap 2774066 2774070 ACTAAATATTCATAA GAAAAGAAATAGCAGTAGTATAATA ATCTA TATTATATTACTGCTATTTCTTTTC TTATGAAGTTTTAAC TERM 3089 2774110 - 2774066 - T 100 -16.2 -4.79955 | opp_overlap 2774066 2774061 2774070, overlap 2774061 2774070 ATATTCATAAGAAAA GAAATAGCAGTAGTATAATA ATCTA TATTATATTACTGCTATTTC TTTTCTTATGAAGTT TERM 3090 2774066 - 2774110 + T 100 -18.4 -4.78839 | opp_overlap 2774061 2774066 2774070, overlap 2774061 2774070 ATATTCATAAGAAAA GAAATAGCAGTAGTATAATA ATCTA TATTATATTACTGCTATTTC TTTTCTTATGAAGTT TERM 3091 2774070 - 2774106 + T 100 -13.4 -4.92812 | opp_overlap 2774066 2774061 2774070, overlap 2774066 2774061 TCATAAGAAAAGAAA TAGCAGTAGTATAATA ATCTA TATTATATTACTGCTA TTTCTTTTCTTATGA TERM 3092 2774106 - 2774070 - T 100 -11.2 -4.92812 | opp_overlap 2774070 2774066 2774061, overlap 2774066 2774061 TCATAAGAAAAGAAA TAGCAGTAGTATAATA ATCTA TATTATATTACTGCTA TTTCTTTTCTTATGA CD2405 2774646 - 2774161 - | MarR family transcriptional regulator TERM 3093 2775608 - 2775596 - g 78 -6.3 -4.77216 | AATAACAGCTAAAAA CTTTG ATT CAAAG GAAATGATAACACAA TERM 3094 2775908 - 2775890 - g 71 -3 -5.26119 | overlap 2775891 TGTTGAAAAAGAAAA TGGTGCTG TTA CAGTACCT AAAAAAGCAATATTT CD2406 2774898 - 2776121 + | putative lipoprotein TERM 3095 2777435 - 2777423 - g 72 -6.3 -4.22591 | AAGAACTGTAACAAA TGCAA TAC TTGCA TCAACATTGACCACA CD2407 2776125 - 2779259 + | putative multidrug efflux pump, membrane protein CD2408 2779272 - 2780591 + | putative multidrug efflux pump, outer membrane protein TERM 3096 2780741 - 2780769 + T 100 -8.3 -5.72254 | gap 1, opp_overlap 2780743 2780758 CTGTATACTTTTATA GAGG-CTATCTC AAAATA GAGATAGGCCTC TTTTTTATTGTTTAA CD2409 2781149 - 2780880 - | hypothetical protein TERM 3097 2781300 - 2781248 - R 80 -6.1 -5.18726 | gap 2, opp_overlap 2781248 TTTTTATAATAAAAA TCCCCTA-TATTCAATTTAT-AAAT ACTTA ATTTGATACATTGAACAATAGGGGA TTTTATTTTTATTTA TERM 3098 2781248 - 2781300 + r 75 -3.9 -5.48028 | gap 2, opp_overlap 2781248 TTTTTATAATAAAAA TCCCCTA-TATTCAATTTAT-AAAT ACTTA ATTTGATACATTGAACAATAGGGGA TTTTATTTTTATTTA ppdK 2783981 - 2781339 - | pyruvate phosphate dikinase CD2411 2784869 - 2784027 - | hypothetical protein CD2412 2785514 - 2784876 - | hypothetical protein TERM 3099 2785586 - 2785597 + r 78 -4.4 -5.4833 | AACTATATATACCAT TCTG TAAA CAGA TTTTTTATTGAATAC CD2413 2787242 - 2785950 - | hypothetical protein TERM 3100 2786850 - 2786861 + g 78 -3 -5.64421 | opp_overlap 2786850 AGTTTCAGCATTTAA CATA ACTA TATG TTTTTTATTTAAAAT TERM 3101 2787176 - 2787190 + g 81 -3.6 -5.54192 | overlap 2787169 TATGCCCAGCTCCTA TAAGAG CTA CTTTTA TTTTTTTACCTTCCT srlB 2787635 - 2787279 - | PTS system, IIA component CD2415 2788029 - 2787670 - | hypothetical protein CD2416 2790071 - 2788098 - | putative transcription antiterminator TERM 3102 2789075 - 2789059 - G 73 -5.9 -4.54727 | CTGTTTAAAGTAAAA CTAAGAT GAT ATCCTAG ACCTACTCTTAATTC srlE 2791306 - 2790293 - | PTS system, glucitol/sorbitol-specific IIBC component srlA 2791864 - 2791319 - | PTS system, glucitol/sorbitol-specific IIc2 component TERM 3103 2792210 - 2792173 - R 100 -10.2 -4.89393 | opp_overlap 2792180 2792209, overlap 2792180 TAAATCTGATAAAAA TAAAAAATAGATGCTC TTTTAC GAACATCTATTTCTTA ATCAAATTATCTTTT TERM 3104 2792203 - 2792180 - R 90 -6.1 -5.98675 | opp_overlap 2792180, overlap 2792173 GATAAAAATAAAAAA TAGATGCTC TTTTAC GAACATCTA TTTCTTAATCAAATT CD2419 2793109 - 2792240 - | AraC family transcription regulator CD2420 2794376 - 2793261 - | hypothetical protein TERM 3105 2794572 - 2794534 - R 100 -7.7 -5.37043 | gap 1, opp_overlap 2794534 ATTTCATACAAAAAA GAGTGTCTCATAAACTAA AAAG TTCATTT-TGAGACACTC TTCTTATTTTAAAGA CD2421 2795748 - 2794612 - | putative peptidase TERM 3106 2795069 - 2795109 + g 73 -9.1 -2.5333 | opp_overlap 2795069, overlap 2795064 2795084 ACTTTTCCCATATCA GGTATTACATTTGCAGCAG TTC CTGCTTCTAGTATAATACC ATGTATTCTCGTTCC TERM 3107 2795109 - 2795069 - G 73 -9.1 -2.62263 | opp_overlap 2795064 2795069 2795084 ACTTTTCCCATATCA GGTATTACATTTGCAGCAG TTC CTGCTTCTAGTATAATACC ATGTATTCTCGTTCC acp 2797267 - 2795804 - | sodium/proton-dependent alanine carrier protein CD2423 2799171 - 2797912 - | transporter CD2424 2800403 - 2799195 - | putative aminotransferase CD2425 2801326 - 2800433 - | phosphate butyryltransferase CD2426 2802402 - 2801344 - | butyrate kinase CD2427 2803098 - 2802559 - | putative oxidoreductase subunit TERM 3108 2802695 - 2802720 + g 72 -4.7 -4.88407 | opp_overlap 2802695 AAACTCTTTACCATA GCACCTAACAT GCAA ATGTTAGCAGC TTTTTCATTGCCTAA CD2428 2803830 - 2803111 - | putative oxidoreductase subunit CD2429 2804909 - 2803833 - | putative oxidoreductase subunit CD2429A 2805135 - 2804938 - | putative oxidoreductase ferredoxin subunit TERM 3109 2805214 - 2805180 - R 76 -8.3 -3.6715 | opp_overlap 2805176 2805182 2805184, overlap 2805187 TTACTTAATTTTAAA TATATAATATTTATA TTTTG TATAAATACTATATA TGCATCAATTTTGTT TERM 3110 2805227 - 2805243 + r 71 -8.1 -3.07119 | opp_overlap 2805238 2805240, overlap 2805226 2805238 ATATGCATCAATTTT GTTCTAT AGT ATAGAAC CTTGTTCTATTTTTA TERM 3111 2805238 - 2805252 + r 87 -7.2 -5.20534 | opp_overlap 2805238 2805240, overlap 2805227 2805226 TTTTGTTCTATAGTA TAGAAC CTT GTTCTA TTTTTATTGCTTAAT TERM 3112 2805346 - 2805395 + r 100 -11.1 -5.18726 | opp_overlap 2805346 TAGATTAAAGAAAAA TAGGCTACATTTAAACTGATATT TACA AATAACAATTTAAATATAGCCTA TTTTTATTATCGAGA TERM 3113 2805395 - 2805346 - R 100 -15.5 -5.35815 | opp_overlap 2805346 TAGATTAAAGAAAAA TAGGCTACATTTAAACTGATATT TACA AATAACAATTTAAATATAGCCTA TTTTTATTATCGAGA CD2430 2806185 - 2805418 - | IclR family transcriptional regulator TERM 3114 2805893 - 2805909 + g 71 -3.1 -5.24989 | ACATTAACTACTTCG TTAAATT CTT GATTTAA TTTTTTCGTATATGG TERM 3115 2806409 - 2806432 + H 88 -8.4 -4.83169 | opp_overlap 2806409 2806407 2806405 2806402, overlap 2806395 CTAGATAATAATATA TATATCTATT ATAC AATAGATATA TTTTTATACAAGACT TERM 3116 2806432 - 2806409 - H 74 -8.4 -3.33395 | opp_overlap 2806395 2806409, overlap 2806407 2806405 2806402 CTAGATAATAATATA TATATCTATT ATAC AATAGATATA TTTTTATACAAGACT CD2431 2806465 - 2808012 + | putative nitrite/sulphite reductase TERM 3117 2808040 - 2808078 + T 75 -5.5 -4.9792 | gap 1 ACTTACAAAAAACAT GGGTGTCTCA-AAATGAA CTTT TTAGTTTATGAGACACTC TTTTTCTATGAAATC TERM 3118 2808155 - 2808126 - T 90 -8 -4.99435 | opp_overlap 2808126 CTCAACAATGAAAAA TAAGACTATCTC TAATTT GAGACAGCCTTA TTTCTTATAAATAGT glyS 2810244 - 2808178 - | glycyl-tRNA synthetase beta chain glyQ 2811122 - 2810244 - | glycyl-tRNA synthetase subunit alpha TERM 3119 2811145 - 2811170 + r 72 -6.1 -4.39133 | opp_overlap 2811147, overlap 2811147 2811168 CCTCCTATAACAATA AAGCCTCTCGT CTAC ACGAAAGGCTA TTTTAATAGTTCTTC TERM 3120 2811147 - 2811168 + r 79 -8.7 -3.78529 | opp_overlap 2811147, overlap 2811145 TCCTATAACAATAAA GCCTCTCGT CTAC ACGAAAGGC TATTTTAATAGTTCT TERM 3121 2811168 - 2811147 - R 100 -10.9 -4.51812 | opp_overlap 2811145 2811147 TCCTATAACAATAAA GCCTCTCGT CTAC ACGAAAGGC TATTTTAATAGTTCT CD2434 2811884 - 2811282 - | hypothetical protein TERM 3122 2811417 - 2811431 + g 75 -4.3 -5.1963 | overlap 2811427 ATTAGTTATCATATT CTTCA AAACG TGAAG TTTTTCTTCATTCAA recO 2812647 - 2811874 - | DNA repair protein CD2436 2814229 - 2812841 - | putative Mg2+ transporter TERM 3123 2812940 - 2812953 + g 86 -3.1 -5.86061 | overlap 2812934 2812938 TGATGAAACTGTAGA TGGGT CTGC ATCCA TTTTTTTTAATAAAA era 2815125 - 2814232 - | GTP-binding protein TERM 3124 2814909 - 2814925 + g 71 -2.4 -5.42514 | TTGCTGCCTTTACCA TAAATT CACCT AATTTA TTTTTTGGTTTGTGA cdd 2815590 - 2815189 - | cytidine deaminase CD2439 2816428 - 2815709 - | putative membrane-associated kinase and phosphatase TERM 3125 2816305 - 2816295 - G 72 -4 -5.08015 | AAGTTAAAAAACAAA CTTA TTA TAAG AACAGCAACTGAACC CD2440 2816895 - 2816434 - | hypothetical protein CD2441a 2817968 - 2816952 - | PhoH-like protein spoIV 2819349 - 2818006 - | putative stage IV sporulation protein TERM 3126 2818512 - 2818522 + g 72 -2.6 -5.39755 | CAACAACATAATCTT TATA TTT TATA TTTTTTCTCATTGTA CD2443 2819604 - 2819362 - | hypothetical protein TERM 3127 2819766 - 2819732 - R 100 -13.9 -5.38549 | opp_overlap 2819732 TTTAAACAAGAAAAA GGTAATCATATTGAT AAAAA ATCAACATGATTACC TTTTTATTTTTTCTT TERM 3128 2819732 - 2819766 + r 100 -11.7 -5.84011 | opp_overlap 2819732 TTTAAACAAGAAAAA GGTAATCATATTGAT AAAAA ATCAACATGATTACC TTTTTATTTTTTCTT CD2444 2820374 - 2819811 - | putative sigma 54 modulation protein CD2445 2821064 - 2820567 - | probale sensory protein TERM 3129 2820917 - 2820931 + g 70 -8.6 -2.60808 | overlap 2820914 TAAAAGCTGGTGGTG CAAAGC TTG GCTTTG TGAGTTGTAAATAAT TERM 3130 2821144 - 2821165 + r 95 -13.1 -2.95068 | opp_overlap 2821144, overlap 2821136 CAAAAACTATAAAAA GCCTAGAGA TTTC TCTCTAGGC TATATCAATCTATTG TERM 3131 2821165 - 2821144 - R 100 -13.1 -5.1286 | opp_overlap 2821136 2821144 CAAAAACTATAAAAA GCCTAGAGA TTTC TCTCTAGGC TATATCAATCTATTG GatB/Yqey 2821627 - 2821175 - | putative tRNA binding protein rpsU 2821827 - 2821648 - | 30S ribosomal protein S21 TERM 3132 2821673 - 2821683 + g 89 -6.8 -5.4756 | GCGTTTTTTCTTCTT GCTG CTT CAGC TTTTTTCTTACGCTT CD2447 2822340 - 2821990 - | histidine triad nucleotide-binding protein CD2448 2823681 - 2822383 - | putative radical SAM superfamily protein TERM 3133 2822613 - 2822625 + g 70 -6.3 -4.06502 | opp_overlap 2822600, overlap 2822600 AATTTAAAAGTTGTT CACTT CTA AAGTG TTTCATTTGAGGGTC TERM 3134 2822797 - 2822810 + g 76 -6.7 -4.50058 | TACATCTGTAGTTAT TGCCA CATC TGGCA TTTTACTTCTCAATC CD2449 2824441 - 2823683 - | hypothetical protein prmA 2825407 - 2824460 - | ribosomal protein L11 methyltransferase TERM 3135 2825457 - 2825477 + r 73 -4.2 -5.12916 | TTTTTCCATAACTTT TATTATAT CATAA ATATAATA TTTTGTTGTTTTATA CD2451 2828265 - 2825848 - | ATP-dependent helicase TERM 3136 2827236 - 2827249 + g 72 -2.5 -5.36441 | overlap 2827232 TATCTAAATCATTTT TATTT TGAA AAATA TTTTTTCTATAAAAA TERM 3137 2827956 - 2827968 + g 77 -4.9 -5.252 | TATTATGTCTTGCTA TCTTT TTT AAAGA TTTTTTGTCAGACTC CD2452 2829080 - 2828283 - | hypothetical protein CD2453 2830112 - 2829096 - | hypothetical protein CD2454 2831607 - 2830132 - | hypothetical protein CD2455 2832349 - 2831612 - | hypothetical protein TERM 3138 2832390 - 2832446 + H 100 -13.8 -2.89607 | gap 1, opp_overlap 2832407, overlap 2832407 AATTCATTATTCTCT ATTTGT-AATATAAAAAATTAATAGAT ATAT ATCTATTAATTTTTTATATTTACAAAA TAGTTAATATTTTAA TERM 3139 2832407 - 2832428 + H 100 -7.5 -5.56264 | opp_overlap 2832407, overlap 2832390 TTGTAATATAAAAAA TTAATAGAT ATAT ATCTATTAA TTTTTTATATTTACA TERM 3140 2832428 - 2832407 - H 100 -7.5 -5.47159 | opp_overlap 2832407 2832390 TTGTAATATAAAAAA TTAATAGAT ATAT ATCTATTAA TTTTTTATATTTACA TERM 3141 2832785 - 2832739 - H 91 -10.7 -3.53733 | opp_overlap 2832753, overlap 2832742 TTGACCGGATAAATA TAATTGTATATAACTAAATTT ACTAG AAATTTAATTATACACAATCA ATACAATCTTAATTA TERM 3142 2832782 - 2832742 - H 93 -10.2 -3.90097 | opp_overlap 2832753, overlap 2832739 ACCGGATAAATATAA TTGTATATAACTAAATTT ACTAG AAATTTAATTATACACAA TCAATACAATCTTAA CD2456 2833085 - 2834194 + | ABC transporter, ATP-binding protein CD2457 2834224 - 2834991 + | hypothetical protein TERM 3143 2835000 - 2835040 + T 100 -13.7 -4.41494 | opp_overlap 2835000 AATTTAACCACTAAA TTAAGCAGAGATTTGAA AGACTAG TTCAAATTTCTGCTTAA TTTTAATTCAAAATA TERM 3144 2835040 - 2835000 - T 100 -11.5 -3.85362 | opp_overlap 2835000 AATTTAACCACTAAA TTAAGCAGAGATTTGAA AGACTAG TTCAAATTTCTGCTTAA TTTTAATTCAAAATA CD2458 2836552 - 2835179 - | transporter TERM 3145 2836021 - 2836011 - G 74 -3.2 -5.4505 | TTTGGGAATAAAAAA TACC CTA GGCA TATAGAAACCAAAAC glcK 2837523 - 2836588 - | glucokinase TERM 3146 2836663 - 2836677 + g 73 -5.8 -4.63932 | AGCTATATCTTCTGT TTTGTA TAA TACAAA TTTTCTTACCAAATC TERM 3147 2837676 - 2837642 - R 100 -13.1 -5.09521 | opp_overlap 2837640 2837638 2837642 TGAACAAAGCAAAAA CATCCTCTCACAGTA TATTT TACTATGAGAAGATG TCTATTTTATTAATT TERM 3148 2837642 - 2837676 + r 79 -8.7 -3.57772 | opp_overlap 2837642, overlap 2837640 2837638 TGAACAAAGCAAAAA CATCCTCTCACAGTA TATTT TACTATGAGAAGATG TCTATTTTATTAATT dnaJ 2839643 - 2838489 - | chaperone protein TERM 3149 2838872 - 2838890 + g 74 -5.3 -4.94902 | gap 1, opp_overlap 2838872 2838870, overlap 2838883 TAACTACAATATATA GGT-CTCC TCTT GGAGCACC TTTTTCTCCTACTTC TERM 3150 2839706 - 2839672 - R 93 -9.5 -4.4009 | opp_overlap 2839668 2839672 2839673 2839675, overlap 2839673 CTTCATTTTACAAAA CGATAGCTTGTAG AATAATAAA CTACAAGCTATCA TTAATTCTTATATTC TERM 3151 2839705 - 2839673 - R 87 -10.8 -3.23733 | opp_overlap 2839672 2839668 2839673 2839675, overlap 2839672 TTCATTTTACAAAAC GATAGCTTGTAG AATAATAAA CTACAAGCTATC ATTAATTCTTATATT TERM 3152 2839673 - 2839705 + r 82 -10.8 -2.76117 | opp_overlap 2839673 2839672, overlap 2839672 2839668 2839675 TTCATTTTACAAAAC GATAGCTTGTAG AATAATAAA CTACAAGCTATC ATTAATTCTTATATT TERM 3153 2839793 - 2839816 + r 71 -8.4 -3.11559 | TATATCTTTAACATC TATATGATTT TCAC AAATCATATA TGTTCCAATTATCAT dnaK 2841701 - 2839854 - | chaperone protein TERM 3154 2841764 - 2841780 + r 79 -8.1 -4.17789 | opp_overlap 2841764 2841775, overlap 2841775 TAATATTTTATATTA GGTTAAA TAA TTTAACC TTTAATTTATACTTA grpE 2842413 - 2841793 - | heat shock protein hrcA 2843462 - 2842443 - | heat-inducible transcription repressor hemN 2844740 - 2843565 - | oxygen-independent coproporphyrinogen III oxidase TERM 3155 2844888 - 2844855 - R 87 -6.9 -5.36965 | opp_overlap 2844855 TAACAGTATAAAAAA TTTGGATAAAAGTTA ATTT TCACCTTTACCCAAA TTTATCTAACTTAAA CD2465 2846225 - 2844912 - | amino acid transporter CD2466 2847804 - 2846458 - | putative poly(A) polymerase TERM 3156 2846933 - 2846956 + g 76 -9.8 -2.77539 | opp_overlap 2846939, overlap 2846931 2846939 TCTCTACTATGAGTA TAAAAATGGT CAAC ACCATTTTTA TCAGTTGTTTTAGTT TERM 3157 2846950 - 2846939 - G 70 -4.4 -4.93296 | opp_overlap 2846933 2846931 2846939 CTATGAGTATAAAAA TGGT CAAC ACCA TTTTTATCAGTTGTT TERM 3158 2846939 - 2846950 + g 70 -4.4 -4.94222 | opp_overlap 2846939, overlap 2846933 2846931 CTATGAGTATAAAAA TGGT CAAC ACCA TTTTTATCAGTTGTT TERM 3159 2847132 - 2847147 + g 72 -6.2 -4.33165 | opp_overlap 2847131 CAGGAATTATAAATT TCAACA AACC TGTTGA TTTTAATAAGTTTAA TERM 3160 2847911 - 2847873 - R 83 -6.3 -5.35459 | gap 1, opp_overlap 2847873 ATATACCATAAAAAA GCTAGACTAA-TTTAGAA ATAA TTCTAAAATCACTCTAGC TTTTAAATATCTTTA lepA 2849749 - 2847944 - | GTP-binding protein LepA TERM 3161 2849886 - 2849864 - R 90 -7.8 -4.93877 | opp_overlap 2849867, overlap 2849867 TGGCACTAAACAAAA TTATCCACAT TAT ATGTGGATTA TCAAGTCTAACACTA TERM 3162 2849867 - 2849883 + r 82 -9.5 -3.34962 | opp_overlap 2849867 2849864 CACTAAACAAAATTA TCCACAT TAT ATGTGGA TTATCAAGTCTAACA TERM 3163 2849883 - 2849867 - R 82 -9.5 -3.34291 | opp_overlap 2849867, overlap 2849864 CACTAAACAAAATTA TCCACAT TAT ATGTGGA TTATCAAGTCTAACA TERM 3164 2850019 - 2849992 - R 77 -6.5 -4.55544 | opp_overlap 2849992, overlap 2849987 2849986 2849983 2849979 AATATATAACTAAAA TAAGGCTTATT TTAATC AATAAACCTTA TTCACTTATTACTAC CD2468 2850282 - 2850031 - | hypothetical protein spoIIP 2851332 - 2850313 - | putative stage II sporulation protein P gpr 2852303 - 2851350 - | germination protease TERM 3165 2852514 - 2852487 - R 100 -9.2 -5.24799 | opp_overlap 2852472 2852487 TTACAAACAGAAAAA GGTAGCAACTAT TTAT ATAGGCGCTACC TTTAATCTATTTATA TERM 3166 2852487 - 2852514 + r 71 -7 -3.98915 | opp_overlap 2852487, overlap 2852472 TTACAAACAGAAAAA GGTAGCAACTAT TTAT ATAGGCGCTACC TTTAATCTATTTATA CD2471 2853422 - 2852646 - | hypothetical protein CD2472 2853977 - 2853456 - | hypothetical protein TERM 3167 2853995 - 2854019 + H 78 -4.4 -5.46629 | opp_overlap 2854013 2854015, overlap 2853997 TATCAGCCCTTTCTT TAGTCTATAA AAATA TTATAGTCTA TTTTTTTAGACTATT rpsT 2854576 - 2854842 + | 30S ribosomal protein S20 TERM 3168 2854873 - 2854886 + T 100 -8.1 -5.86976 | opp_overlap 2854873 TCTTATATATAATAA CCCCT ATGT AGGGG TTTTTTATTTTGTAA TERM 3169 2854886 - 2854873 - T 78 -8.1 -3.92996 | opp_overlap 2854873 TCTTATATATAATAA CCCCT ATGT AGGGG TTTTTTATTTTGTAA CD2474 2856021 - 2855029 - | hypothetical protein CD2475 2857321 - 2856026 - | putative competence membrane protein TERM 3170 2857435 - 2857403 - R 100 -14.5 -5.96894 | opp_overlap 2857405 2857413 ATCTAAACAAAAAAA TACGTCAAAAGATTT TTA AAATCTTTTAACGTA CTCTACCTATATATA TERM 3171 2857405 - 2857433 + r 81 -10.5 -2.66291 | opp_overlap 2857403, overlap 2857413 CTAAACAAAAAAATA CGTCAAAAGATTT TTA AAATCTTTTAACG TACTCTACCTATATA CD2476 2858626 - 2857442 - | hypothetical protein CD2477 2859540 - 2858635 - | hypothetical protein TERM 3172 2859494 - 2859504 + g 78 -3.2 -5.58209 | overlap 2859485 2859480 ACTAAATCAAAATAT GGGT CTA ACTC TTTTTTTGAATTTAG TERM 3173 2859723 - 2859740 + H 82 -4.3 -5.64274 | opp_overlap 2859736, overlap 2859726 ATGAATGGAGTGATT TTTTATT GAGA AATAAAA TTTTTTTATCAATAC TERM 3174 2860023 - 2860013 - g 81 -2.6 -5.70829 | AATATTATAAAAAAA TTTA ATG TAAA CTCCATATATATGCC CD2478 2859728 - 2860564 + | metallo beta-lactamase superfamily lipoprotein TERM 3175 2860665 - 2860613 - T 75 -6.5 -4.44211 | opp_overlap 2860624, overlap 2860610 2860614 2860616 GGTAATATAAAATAA TTAGGCTAAAAGTATGAATATAAAA TTG CTTTGTATTCATGCTTCTAGCCTTC AAATTTGTATATAAA TERM 3176 2860664 - 2860614 - T 85 -10 -3.25442 | opp_overlap 2860624, overlap 2860613 2860610 2860616 GTAATATAAAATAAT TAGGCTAAAAGTATGAATATAAAA TTG CTTTGTATTCATGCTTCTAGCCTT CAAATTTGTATATAA TERM 3177 2860662 - 2860616 - T 95 -12.6 -3.17136 | opp_overlap 2860624, overlap 2860614 2860613 2860610 AATATAAAATAATTA GGCTAAAAGTATGAATATAAAA TTG CTTTGTATTCATGCTTCTAGCC TTCAAATTTGTATAT CD2479 2861413 - 2860706 - | hypothetical protein TERM 3178 2861530 - 2861553 + r 100 -11.2 -4.28254 | opp_overlap 2861530 AAATAAATTTAAAAA GGTATCTTTT AATT AAAAGATACC TTTTACATATTGGCG TERM 3179 2861553 - 2861530 - R 100 -11.2 -4.88295 | opp_overlap 2861530 AAATAAATTTAAAAA GGTATCTTTT AATT AAAAGATACC TTTTACATATTGGCG CD2480 2862743 - 2861904 - | hypothetical protein TERM 3180 2861941 - 2861953 + g 78 -6.3 -4.7078 | ATAGTTTTTCTTCCC CAGTT ATA AACTG TTTTTGAATCATTCA TERM 3181 2862885 - 2862931 + r 74 -8.3 -3.34013 | opp_overlap 2862885, overlap 2862891 AACTTGACAAAAAAA TAGAAATATGCATACATAGTT TTTTC AACCATTTAAGCATATTTCTA TTAGTTACAACAATG TERM 3182 2862931 - 2862885 - R 100 -10.5 -5.63504 | opp_overlap 2862885 2862891 AACTTGACAAAAAAA TAGAAATATGCATACATAGTT TTTTC AACCATTTAAGCATATTTCTA TTAGTTACAACAATG ung 2863666 - 2862992 - | uracil-DNA glycosylase CD2482 2864074 - 2863703 - | putative lipoprotein CD2483 2864141 - 2865199 + | hypothetical protein TERM 3183 2865346 - 2865294 - T 72 -6 -4.53705 | opp_overlap 2865294 AATTTTTATATAAAA TATGGTATATACTTAAGTAA TCTAAAACAAATT CTACTTATGTATATACCATA TTAATAGTTTAAATT CD2484 2866568 - 2865390 - | putative aminotransferase CD2485 2867686 - 2866622 - | Xaa-Pro dipeptidase TERM 3184 2867759 - 2867725 - R 95 -13 -3.17685 | opp_overlap 2867722 2867721 2867718 TAATCATATAGGTAA GGCTGGTAATATTGAT TAA AACCATATTACCAGCC AAAGTTATTTATAGA CD2486 2869053 - 2867791 - | PTS system, IIC component CD2487 2869395 - 2869078 - | PTS system, IIB component CD2488 2869909 - 2869454 - | pts system, IIA component CD2489 2871813 - 2869924 - | transcriptional antiterminator CD2490 2873271 - 2871901 - | putative peptidase pmi 2873435 - 2874379 + | mannose-6-phosphate isomerase TERM 3185 2874400 - 2874434 + T 95 -10.3 -4.183 | opp_overlap 2874400 AAACCTAGCTAAAAA TAGGCTATCATAA TAATTTACC TTATGATAGCCTA TTTCTTACAACTTAA TERM 3186 2874434 - 2874400 - T 100 -10.3 -4.69027 | opp_overlap 2874400 AAACCTAGCTAAAAA TAGGCTATCATAA TAATTTACC TTATGATAGCCTA TTTCTTACAACTTAA CD2492 2877236 - 2874498 - | putative sensor histidine kinase TERM 3187 2877184 - 2877156 - G 76 -9.7 -2.59538 | opp_overlap 2877155 2877156, overlap 2877155 2877152 2877153 AAATAATAAAAGTAC TGAGCCCATTATT ATA AATAAAAGGCTCA TGTCTTCTCTTTCTT selB 2879224 - 2877341 - | selenocysteine-specific elongation factor fdhA 2880750 - 2879338 - | selenocysteine synthase TERM 3188 2879453 - 2879463 + g 89 -4 -5.93809 | ATTATATGTGCTTCA CTAA GTC TTAG TTTTTTTTCTAAAGA selD 2881814 - 2880768 - | selenide,water dikinase comE 2882610 - 2881906 - | putative competence protein CD2498 2882690 - 2883979 + | D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific penicillin-binding protein) TERM 3189 2884028 - 2884085 + T 100 -14.7 -3.77089 | opp_overlap 2884033 2884039, overlap 2884033 2884034 ATATACTTATCCTTA TAAATCTAAAAGTACTGAGATAATAAT TATA ACTATTATCTCAGTACTTTTAATTTTA TGTTTATGTATTTTT TERM 3190 2884080 - 2884033 - T 100 -19 -2.92475 | opp_overlap 2884028 2884033 2884034, overlap 2884039 CTTATCCTTATAAAT CTAAAAGTACTGAGATAATAAT TATA ACTATTATCTCAGTACTTTTAA TTTTATGTTTATGTA TERM 3191 2884033 - 2884080 + T 100 -14.6 -4.87328 | opp_overlap 2884033 2884039, overlap 2884028 2884034 CTTATCCTTATAAAT CTAAAAGTACTGAGATAATAAT TATA ACTATTATCTCAGTACTTTTAA TTTTATGTTTATGTA TERM 3192 2884034 - 2884079 + T 100 -18.1 -3.5077 | opp_overlap 2884033 2884039, overlap 2884033 2884028 TTATCCTTATAAATC TAAAAGTACTGAGATAATAAT TATA ACTATTATCTCAGTACTTTTA ATTTTATGTTTATGT TERM 3193 2884074 - 2884039 - T 100 -15.8 -4.39571 | opp_overlap 2884034 2884033 2884028, overlap 2884033 CTTATAAATCTAAAA GTACTGAGATAATAAT TATA ACTATTATCTCAGTAC TTTTAATTTTATGTT CD2499 2884444 - 2884106 - | hypothetical protein TERM 3194 2884681 - 2884634 - R 100 -16.8 -3.54721 | opp_overlap 2884640, overlap 2884640 TAAAATCTTACACAA TAAAAAGCTGTAAATTTAAATG ATAA CATTCAAATTTACAGCTTTTAA AAATAAATACATTAT TERM 3195 2884675 - 2884640 - R 100 -15.8 -5.24796 | opp_overlap 2884640, overlap 2884634 CTTACACAATAAAAA GCTGTAAATTTAAATG ATAA CATTCAAATTTACAGC TTTTAAAAATAAATA TERM 3196 2884640 - 2884675 + r 100 -13.6 -4.11692 | opp_overlap 2884640 2884634 CTTACACAATAAAAA GCTGTAAATTTAAATG ATAA CATTCAAATTTACAGC TTTTAAAAATAAATA argH 2886018 - 2884693 - | argininosuccinate lyase TERM 3197 2886103 - 2886079 - R 100 -13 -5.41359 | AATGAAACTAAAAAA TCTCTTGGTC AAAAA GACCAAGAGA CGAAATATTCCGTGT TERM 3198 2886129 - 2886151 + r 80 -9.2 -3.27382 | overlap 2886127 2886125 CGTGTTACCACTCTA GTTGGTAAAC AAT GTTTACCCAC TCTATTCTCTTAAGG CD2501 2887207 - 2886386 - | putative hydrolase TERM 3199 2886716 - 2886734 + g 83 -2.4 -5.9218 | overlap 2886718 CAATTCTTTTCTTAT TTCATCCA AAA TAGATGGA TTTTTTTCTTCTATG TERM 3200 2887950 - 2887940 - g 76 -5.4 -5.08178 | AGACAGATATAAAAA TGCA TGG TGCA ACTTATGATTATGTT TERM 3201 2888027 - 2888005 - g 70 -4.3 -4.87893 | AAGTTTAATGAAAAA GAATTTATT GAAAA AATAAATCC AGAATATAAAGTAAT CD2502 2887567 - 2888670 + | putative histidinol-phosphate aminotransferase TERM 3202 2888683 - 2888719 + T 87 -6.7 -5.43514 | opp_overlap 2888689, overlap 2888684 TAAATTAGACTATTT ATAAAAGGCATATTGTT AAA ATCAATATGCCCTTTAA TTTTTTGATTATTTT TERM 3203 2888684 - 2888718 + T 90 -10.2 -3.82448 | opp_overlap 2888689, overlap 2888683 AAATTAGACTATTTA TAAAAGGCATATTGTT AAA ATCAATATGCCCTTTA ATTTTTTGATTATTT TERM 3204 2888713 - 2888689 - T 100 -10.1 -4.44245 | opp_overlap 2888684 2888683 AGACTATTTATAAAA GGCATATTGTT AAA ATCAATATGCC CTTTAATTTTTTGAT CD2503 2891367 - 2888728 - | cation-transporting ATPase TERM 3205 2890184 - 2890197 + g 71 -6.7 -3.94188 | ATTAAAGCCACTTCT GTTGG GTCA CCAAC TTCTTTACCATCACT TERM 3206 2891507 - 2891468 - R 90 -6.7 -5.7946 | gap 1 CCTTGAATAAAAAAA GACCC-CAAAACAAACAT ACCTA ATGCTTATTTTGAAGGTC TTGCTATCAAGGAAT CD2504 2892339 - 2891692 - | putative D-alanyl-D-alanine carboxypeptidase TERM 3207 2892443 - 2892459 + H 95 -8.1 -5.13354 | opp_overlap 2892442, overlap 2892448 CTTCTTTAAACAATT CTTAAGA AAC TCTTAAG TTTCTTTTTTATACG TERM 3208 2892448 - 2892463 + H 80 -6.2 -5.252 | opp_overlap 2892442, overlap 2892443 TTAAACAATTCTTAA GAAACT CTTA AGTTTC TTTTTTATACGACTA CD2505 2892618 - 2893508 + | TetR family transcriptional regulator CD2506 2893512 - 2894912 + | putative transporter CD2507 2895755 - 2895036 - | hypothetical protein CD2508 2896590 - 2895802 - | AraC family transcription regulator CD2509 2898043 - 2896691 - | 6-phospho-alpha-glucosidase TERM 3209 2896791 - 2896801 + g 72 -5.4 -4.76644 | TTATTTAATGTGAAT GCTT GTA AAGC TTTTTCATAACTATT TERM 3210 2897070 - 2897080 + g 70 -5.4 -4.60924 | TCTCCATGTGAACCT GCAT AAA ATGC TTTTTCAGAAATTTC CD2510 2899690 - 2898140 - | PTS system, IIBC component CD2511 2900556 - 2899741 - | transcriptional antiterminator CD2512 2901059 - 2900577 - | PTS system, IIA component TERM 3211 2901147 - 2901107 - R 100 -11.4 -5.47159 | gap 1, opp_overlap 2901107 TTTCAATACAAAAAA GGCATGAATCCTCAGGATA AAAA TATCC-AAGAACTCATGCC TAATTTAATAGTTAC TERM 3212 2901317 - 2901287 - R 78 -6.9 -4.83169 | opp_overlap 2901287 ATTTTTTTATAAAAA GGCTGAATCACTA GAATA TAGTTTTTCAGCC TTTTCAAATTAAAAA TERM 3213 2901287 - 2901317 + r 71 -6.9 -4.19238 | opp_overlap 2901287 ATTTTTTTATAAAAA GGCTGAATCACTA GAATA TAGTTTTTCAGCC TTTTCAAATTAAAAA CD2513 2901723 - 2901343 - | putative translation inhibitor endoribonuclease tdcB 2903035 - 2901818 - | threonine dehydratase catabolic TERM 3214 2902330 - 2902308 - G 77 -7.8 -4.15565 | TTTATTATTTCAAAA GTTAAATCTC CTG GAGTTTTAAC AGCTATACCATCAGC TERM 3215 2904967 - 2904957 - g 79 -5.4 -5.252 | opp_overlap 2904957 GATGCCTACAAAAAA CTCA ATA TGAG TATCTGCCATAGACG aspD 2903694 - 2905322 + | aspartate aminotransferase TERM 3216 2905789 - 2905773 - g 74 -7.3 -3.9749 | opp_overlap 2905773 ATTGACAACATCAAA CCTGTAA TAG TCACAGG TGCTATGAGAAGTAG CD2516 2905443 - 2906438 + | putative L-asparaginase TERM 3217 2906606 - 2906582 - T 79 -5.1 -5.56673 | gap 1, opp_overlap 2906577 2906582 ATCCACAAGAAAAAA GGTAGC-ACT TATATT AGTAGCTACC TTTTATTTATTAATC TERM 3218 2906582 - 2906606 + T 74 -5.1 -5.12172 | gap 1, opp_overlap 2906582, overlap 2906577 ATCCACAAGAAAAAA GGTAGC-ACT TATATT AGTAGCTACC TTTTATTTATTAATC CD2517 2906999 - 2906616 - | putative regulatory protein TERM 3219 2906871 - 2906890 + g 81 -3.6 -5.5762 | overlap 2906873 AAGTGTAATTGTAGT TGTATGCT TCCA AGCATATG TTTTTTCTATTTCAT TERM 3220 2906873 - 2906888 + g 74 -6.2 -4.40478 | overlap 2906871 GTGTAATTGTAGTTG TATGCT TCCA AGCATA TGTTTTTTCTATTTC CD2517A 2908333 - 2908175 - | hypothetical protein TERM 3221 2908231 - 2908243 + g 79 -5.5 -5.1361 | AACCACTCTTAGTTG CCGCT TTG AGTGG TTTTTTACGCTTTCT TERM 3222 2908526 - 2908506 - R 70 -2.6 -5.63103 | TTTTAATCAAAAAAA CACCTACT ATTAA AGTAAATG TTTTTAAGTATTTTT CD2518 2910062 - 2908692 - | cell surface protein TERM 3223 2910225 - 2910241 + H 75 -7.3 -4.36914 | opp_overlap 2910225 ATAATGACATAATTA GAGCAGT CCA ACTGTTC TTTTATAAAACCAAC TERM 3224 2911029 - 2911015 - g 79 -5.7 -5.1166 | CACCAAAATCAAAAA GAGCT TTATC AGCTC CAAAAGAATTAATTG CD2519 2910276 - 2911394 + | integrase TERM 3225 2911411 - 2911401 - T 75 -5.4 -4.93696 | opp_overlap 2911401 TTTAAATAGTAAAAA CTGA CTG TCAG TTAAATGTCAGTTAA TERM 3226 2911626 - 2911683 + T 86 -12.4 -2.53213 | gap 1, opp_overlap 2911622 2911631 2911633 2911636, overlap 2911631 2911633 2911636 2911682 ATAAAATGAGATGTT GACAACATAACAGACAGTATGCT-CCT GTAAA AGGTAACATACTATCTGTTATATTGTC TGGATTCCCAGATTA TERM 3227 2911678 - 2911631 - T 95 -11.7 -3.32521 | gap 1, opp_overlap 2911626 2911631 2911633 2911636, overlap 2911622 2911633 2911636 ATGAGATGTTGACAA CATAACAGACAGTATGCT-CCT GTAAA AGGTAACATACTATCTGTTATA TTGTCTGGATTCCCA TERM 3228 2911676 - 2911633 - T 93 -12.1 -3.22951 | gap 1, opp_overlap 2911631 2911626 2911633 2911636, overlap 2911631 2911636 GAGATGTTGACAACA TAACAGACAGTATGCT-CCT GTAAA AGGTAACATACTATCTGTTA TATTGTCTGGATTCC TERM 3229 2911633 - 2911676 + T 70 -7.7 -3.34983 | gap 1, opp_overlap 2911633 2911631 2911636, overlap 2911631 2911626 2911636 GAGATGTTGACAACA TAACAGACAGTATGCT-CCT GTAAA AGGTAACATACTATCTGTTA TATTGTCTGGATTCC TERM 3230 2911673 - 2911636 - T 84 -9.4 -3.75378 | gap 1, opp_overlap 2911633 2911631 2911626 2911636, overlap 2911633 2911631 ATGTTGACAACATAA CAGACAGTATGCT-CCT GTAAA AGGTAACATACTATCTG TTATATTGTCTGGAT CD2520 2912397 - 2911711 - | hypothetical protein leuS 2915653 - 2913233 - | leucyl-tRNA synthetase TERM 3231 2915775 - 2915742 - R 100 -16.9 -5.79595 | opp_overlap 2915738 TTTGAAAATAAAAAA TCCTCGTCACTAAAC TTAC GTTTAGGGACGAGGA TAAATCTTCGCGGTA CD2522 2916357 - 2916007 - | hypothetical protein TERM 3232 2916318 - 2916332 + g 76 -5 -5.0809 | overlap 2916316 2916320 CTAGTTTATCTTCTA TGGCAT CAT ATGCTA TTTTTGTCATTTGTT CD2523 2917046 - 2916474 - | putative metal dependent phosphohydrolase nadD 2917736 - 2917047 - | nicotinate-nucleotide adenylyltransferase TERM 3233 2917751 - 2917777 + H 82 -4.6 -5.80003 | TATTTTGTCTCCTTT TAATGTTATAAT ACT ATTGTACCATTA TTTTTTATTTCTTAA TERM 3234 2918229 - 2918207 - g 70 -4.2 -4.92828 | opp_overlap 2918211 AAAGCTAAAAATAAA GCATTAAATA TTT TATCTCATGC TGACCAATCTGAAAA recX 2918012 - 2918650 + | recombination regulator RecX gbeA 2918803 - 2920806 + | glycogen branching enzyme CD2527 2920959 - 2921621 + | TetR family transcriptional regulator TERM 3235 2921663 - 2921619 - f 95 -11.2 -3.60475 | gap 1, opp_overlap 2921626 2921633, overlap 2921621 2921626 2921633 AATAAATTTTCTAAA TAGTAAATATAAAACTGCC TTAATATC GGCAGTTTTATATTTAC-A CAAAACAAACATTTA TERM 3236 2921662 - 2921621 - f 100 -16.3 -3.37283 | opp_overlap 2921626 2921633, overlap 2921619 2921626 2921633 TAAATTTTCTAAATA GTAAATATAAAACTGCC TTAATATC GGCAGTTTTATATTTAC ACAAAACAAACATTT TERM 3237 2921626 - 2921657 + F 91 -10.4 -3.53012 | opp_overlap 2921621 2921619 2921626 2921633, overlap 2921633 TTTCTAAATAGTAAA TATAAAACTGCC TTAATATC GGCAGTTTTATA TTTACACAAAACAAA TERM 3238 2921657 - 2921626 - f 95 -10.4 -4.00532 | opp_overlap 2921626 2921633, overlap 2921621 2921619 2921633 TTTCTAAATAGTAAA TATAAAACTGCC TTAATATC GGCAGTTTTATA TTTACACAAAACAAA TERM 3239 2922366 - 2922347 - g 76 -8.6 -3.39556 | opp_overlap 2922346, overlap 2922345 AATGCTTTAATAACA GCATATCC AGAT GGACATGC ATGGATTGAGCAATT CD2528 2921714 - 2922397 + | hypothetical protein TERM 3240 2922439 - 2922453 + T 72 -5 -4.96762 | ATGATAATCCACACT CTAACA GTT TGTTGG TTTTTCTAGTATATA TERM 3241 2922531 - 2922496 - T 100 -11.4 -4.56802 | opp_overlap 2922493 2922490 2922496, overlap 2922488 AAATAAACACTAAAA GCCAAATAACAATTTA AATA CAAAATGTTATTTGGC TAATTTAGTTTGATA TERM 3242 2922496 - 2922531 + T 85 -10.7 -3.08002 | opp_overlap 2922496 2922488, overlap 2922493 2922490 AAATAAACACTAAAA GCCAAATAACAATTT AAATAC AAAATGTTATTTGGC TAATTTAGTTTGATA CD2529 2922885 - 2922574 - | hypothetical protein TERM 3243 2922892 - 2922940 + r 70 -7.7 -3.30124 | opp_overlap 2922894, overlap 2922894 AATTTTCATATGTAA AACCTCCAATTTATTTTCCTATA TCA TATCAAAAAATAAATTGGAGGTA TTGTAAAAAATCGAC TERM 3244 2922938 - 2922894 - R 100 -14.7 -4.2349 | opp_overlap 2922892 2922894 TTTTCATATGTAAAA CCTCCAATTTATTTTCCTATA TCA TATCAAAAAATAAATTGGAGG TATTGTAAAAAATCG TERM 3245 2922894 - 2922938 + r 87 -10.3 -3.21924 | opp_overlap 2922894, overlap 2922892 TTTTCATATGTAAAA CCTCCAATTTATTTTCCTATA TCA TATCAAAAAATAAATTGGAGG TATTGTAAAAAATCG CD2530 2923781 - 2922963 - | hypothetical protein CD2531 2924405 - 2923881 - | hypothetical protein CD2532 2925566 - 2924424 - | putative aminotransferase TERM 3246 2925458 - 2925490 + g 71 -2.2 -5.36965 | gap 1 TCTTTTTATAAAATT CAACAAAATCA-ATA TCTA TATCTGGATTTGTTG TTTTTTCTGCTCTTG TERM 3247 2925755 - 2925719 - R 100 -11.8 -4.85918 | opp_overlap 2925718 2925721 GATTACATAATAAAA TACAGAGCAAACATCT GCTTA AATTGTTTGCTCTGTA CTATGCTTTAACCTA CD2533 2928233 - 2925846 - | ABC transporter, permease protein TERM 3248 2928073 - 2928084 + g 71 -3 -5.32396 | TGATAATTGCCTGAA TACT TTAT AGTA TTTTCTTTTTGATAT TERM 3249 2928152 - 2928178 + g 75 -4.6 -5.1517 | opp_overlap 2928152 GCATTAAGGTTGAAA GTATTATAGTAA TTA TTATTAGAATAC TTTTTGATTTATTTT CD2534 2928909 - 2928226 - | ABC transporter ATP-binding protein CD2535 2930324 - 2929026 - | two-component sensor histidine kinase CD2536 2931058 - 2930330 - | two-component response regulator TERM 3250 2931248 - 2931286 + r 75 -8.5 -3.57873 | gap 1, opp_overlap 2931249 2931253, overlap 2931249 2931253 ATGTTAAAACATAAA ACAAAGGAAATTAGT-AT TTAT ATAACTAATTTCCTTTGC TGTTTACTATTATCT TERM 3251 2931285 - 2931249 - R 100 -12 -4.89567 | gap 1, opp_overlap 2931248 2931249 2931253, overlap 2931253 TGTTAAAACATAAAA CAAAGGAAATTAGT-AT TTAT ATAACTAATTTCCTTTG CTGTTTACTATTATC TERM 3252 2931249 - 2931285 + r 88 -12 -2.7364 | gap 1, opp_overlap 2931249 2931253, overlap 2931248 2931253 TGTTAAAACATAAAA CAAAGGAAATTAGT-AT TTAT ATAACTAATTTCCTTTG CTGTTTACTATTATC TERM 3253 2931253 - 2931281 + r 73 -7 -4.03321 | gap 1, opp_overlap 2931249 2931253, overlap 2931249 2931248 AAAACATAAAACAAA GGAAATTAGT-AT TTAT ATAACTAATTTCC TTTGCTGTTTACTAT TERM 3254 2931281 - 2931253 - R 83 -7 -4.93812 | gap 1, opp_overlap 2931253 2931249 2931248, overlap 2931249 AAAACATAAAACAAA GGAAATTAGT-AT TTAT ATAACTAATTTCC TTTGCTGTTTACTAT CD2537 2933183 - 2931342 - | putative membrane-associated 5'-nucleotidase/phosphoesterase TERM 3255 2931458 - 2931439 - G 70 -5 -4.63928 | opp_overlap 2931445, overlap 2931445 ATACTATTTGAAAAA CCTAAATC TCCT GTTTTAGG AGATTTTTCTTTAGC TERM 3256 2931445 - 2931461 + g 86 -7.3 -5.33026 | opp_overlap 2931439 2931445 TTTGAAAAACCTAAA TCTCCTG TTT TAGGAGA TTTTTCTTTAGCTTC TERM 3257 2931461 - 2931445 - G 71 -6.6 -3.99805 | opp_overlap 2931445, overlap 2931439 TTTGAAAAACCTAAA TCTCCT GTTTT AGGAGA TTTTTCTTTAGCTTC TERM 3258 2931584 - 2931594 + g 88 -4 -5.79588 | ATAGATTCTCTTCAT TATC ATT GATA TTTTTTTCATTTTCA CD2538 2934280 - 2933396 - | putative lipoprotein elaC 2934488 - 2935405 + | ribonuclease Z nox 2936881 - 2935547 - | coenzyme A disulfide reductase CD2541 2937222 - 2938610 + | sodium:dicarboxylate symporter family protein TERM 3259 2938625 - 2938657 + T 100 -12.3 -4.37092 | opp_overlap 2938625 2938629, overlap 2938629 GAATAACACTCAAAA TAAATGGCTAACT TTTTACC AGTTAGCCATTTA TTTTATCAGAAAACT TERM 3260 2938657 - 2938625 - T 100 -12.3 -4.32048 | opp_overlap 2938625 2938629, overlap 2938629 GAATAACACTCAAAA TAAATGGCTAACT TTTTACC AGTTAGCCATTTA TTTTATCAGAAAACT TERM 3261 2938629 - 2938653 + T 93 -8.7 -4.77173 | opp_overlap 2938625 2938629, overlap 2938625 AACACTCAAAATAAA TGGCTAACT TTTTACC AGTTAGCCA TTTATTTTATCAGAA TERM 3262 2938653 - 2938629 - T 89 -8.7 -4.71418 | opp_overlap 2938629 2938625, overlap 2938625 AACACTCAAAATAAA TGGCTAACT TTTTACC AGTTAGCCA TTTATTTTATCAGAA CD2542 2939892 - 2938684 - | hypothetical protein TERM 3263 2939761 - 2939773 + g 81 -2.7 -5.69793 | TTTTAAACTACTTTT TTCAG CTA TTGAA TTTTTTATTTCCTGT CD2543 2941325 - 2939907 - | putative polysaccharide O-acetylase CD2544 2942419 - 2941343 - | hypothetical protein TERM 3264 2942391 - 2942369 - G 71 -2 -5.39407 | overlap 2942371 2942372 2942380 2942382 2942384 TATAAAAAAAATAAA CACCAAAATA AGA TATTTTGTAG AACAAAAAAACACTT CD2545 2944736 - 2942430 - | cellulose synthase catalytic subunit (UDP-forming) CD2546 2945763 - 2944741 - | endoglucanase (cellulase) TERM 3265 2945933 - 2945954 + r 72 -8.9 -2.53798 | overlap 2945932 2945929 AGAAATAATCCTATT TTTCATTGT TGAA ACAATGAAA CTATATTGATTTCAT CD2547 2947773 - 2946025 - | hypothetical protein CD2548 2948640 - 2947831 - | putative sugar transporter, permease protein CD2549 2949573 - 2948656 - | putative sugar transporter, permease protein TERM 3266 2949509 - 2949519 + g 81 -2.6 -5.69976 | ATATACATATATGGT TTAA TAT TTAA TTTTGTTTTTTTTCT TERM 3267 2949627 - 2949594 - R 100 -11.3 -4.1891 | opp_overlap 2949596, overlap 2949596 CCTCTCCAATATAAA TATTAGCATTGTATT TATA AATACAATGCTAATT TTAATCTGTAAAGTA TERM 3268 2949625 - 2949596 - R 100 -13.9 -3.6944 | opp_overlap 2949596, overlap 2949594 TCTCCAATATAAATA TTAGCATTGTATT TATA AATACAATGCTAA TTTTAATCTGTAAAG TERM 3269 2949596 - 2949625 + r 100 -13.9 -4.39166 | opp_overlap 2949594 2949596 TCTCCAATATAAATA TTAGCATTGTATT TATA AATACAATGCTAA TTTTAATCTGTAAAG CD2550 2950963 - 2949671 - | putative sugar transporter, substrate-binding lipoprotein TERM 3270 2950440 - 2950459 + g 75 -7.2 -4.05747 | AAATCTTCCCATGTT TTAGGAGG TTTT TCTCCTAA TTTCTCTAAAATATC TERM 3271 2951285 - 2951252 - R 95 -10.5 -3.84808 | opp_overlap 2951258 2951283, overlap 2951258 TTTAATCTACAATAA TAAAAAGCTGTAGAT TTTT ACCTACAGCTTTTAA ATGATAGCATTTATT TERM 3272 2951258 - 2951279 + r 75 -7.3 -4.21194 | opp_overlap 2951252 2951258 CTACAATAATAAAAA GCTGTAGAT TTTT ACCTACAGC TTTTAAATGATAGCA TERM 3273 2951279 - 2951258 - R 100 -9.5 -5.34365 | opp_overlap 2951258, overlap 2951252 CTACAATAATAAAAA GCTGTAGAT TTTT ACCTACAGC TTTTAAATGATAGCA CD2551 2951348 - 2951238 - | hypothetical protein TERM 3274 2951318 - 2951349 + g 71 -2.4 -5.47399 | overlap 2951320 ATATTATTAATATTC TTTGTTGATAAACT TCAA AGTTCATTAACATA TTTTTTTAACCTTAA CD2552 2952101 - 2951361 - | hypothetical protein TERM 3275 2951539 - 2951549 + g 76 -5.4 -5.01811 | opp_overlap 2951539, overlap 2951545 GCTATTACAGTAGAA GTTG GAC CAAC TTTTTGGTTTAATCC ulaA 2955340 - 2952104 - | ascorbate-specific PTS system enzyme IIC TERM 3276 2953445 - 2953459 + gr 90 -10 -3.69283 | CTCCACAGGCTATCC CCGTAG TTC CTACGG TTCTTACATAAGTTA tlpB 2954590 - 2953472 - | transposase-like protein B TERM 3277 2953969 - 2953985 + g 73 -5.9 -4.58076 | GTTTGCTTAATGACT TCTTAAG ATA CTTAGGA TTTTCTATAAATTCT TERM 3278 2954306 - 2954317 + g 74 -3 -5.38951 | AGGAAATCCTGCTTT TTCT TTAA AGAA TTTTTTATATGCATT tlpA 2954699 - 2954592 - | transposase-like protein A TERM 3279 2955230 - 2955244 + gr 72 -8.6 -3.01912 | opp_overlap 2955222, overlap 2955243 AATTCAAGTAGTATT GGATAG GTT CTATCC TATCTCTACATATAG TERM 3280 2955283 - 2955324 + gr 78 -5.4 -5.14563 | gap 2, opp_overlap 2955293 ATATGCTGACTATTT TAGCTAC-TA-ACTCATGAC TAAA GTCACGAGTGTGCGTAGCTA TTTTTTAATCAAGCA TERM 3281 2955312 - 2955293 - GR 73 -8.6 -3.18582 | opp_overlap 2955283 TATTTTAGCTACTAA CTCATGAC TAAA GTCACGAG TGTGCGTAGCTATTT CD2555 2955760 - 2955473 - | phosphotransferase system, B component CD2556 2957692 - 2955773 - | bifunctional protein TERM 3282 2957967 - 2958023 + r 93 -9.7 -4.4784 | opp_overlap 2957944 2957973 2957975, overlap 2957973 2957974 2957975 2957977 CAAAAAATTGCTATA TTAAAAGAGAGCTATCACACATAAATT GGA ATTTTTTGTGTGATAGCTCCATTTTTA TTTATTTAAAATTTA TERM 3283 2957973 - 2958017 + r 100 -8.7 -5.5454 | opp_overlap 2957973 2957975, overlap 2957967 2957974 2957975 2957977 ATTGCTATATTAAAA GAGAGCTATCACACATAAATT GGA ATTTTTTGTGTGATAGCTCCA TTTTTATTTATTTAA TERM 3284 2958016 - 2957973 - R 100 -12 -4.3467 | gap 1, opp_overlap 2957973 2957967 2957974 2957975 2957977, overlap 2957975 ATTGCTATATTAAAA GAGAGCTATCACACATAAATT GGA ATTTTTTGTGTGATAGCTC-C ATTTTTATTTATTTA TERM 3285 2957974 - 2958016 + r 100 -12.2 -3.90284 | opp_overlap 2957973 2957975, overlap 2957973 2957967 2957975 2957977 TTGCTATATTAAAAG AGAGCTATCACACATAAATT GGA ATTTTTTGTGTGATAGCTCC ATTTTTATTTATTTA TERM 3286 2957975 - 2958015 + r 100 -15.7 -2.9173 | opp_overlap 2957973 2957975, overlap 2957974 2957973 2957967 2957977 TGCTATATTAAAAGA GAGCTATCACACATAAATT GGA ATTTTTTGTGTGATAGCTC CATTTTTATTTATTT TERM 3287 2958015 - 2957975 - R 100 -15.7 -3.77806 | opp_overlap 2957975 2957974 2957973 2957967 2957977, overlap 2957973 TGCTATATTAAAAGA GAGCTATCACACATAAATT GGA ATTTTTTGTGTGATAGCTC CATTTTTATTTATTT TERM 3288 2957977 - 2958013 + r 90 -12.5 -2.96898 | opp_overlap 2957975 2957973, overlap 2957975 2957974 2957973 2957967 CTATATTAAAAGAGA GCTATCACACATAAATT GGA ATTTTTTGTGTGATAGC TCCATTTTTATTTAT CD2557 2958560 - 2958036 - | hypothetical protein coaD 2959061 - 2958564 - | phosphopantetheine adenylyltransferase TERM 3289 2958610 - 2958621 + g 74 -3 -5.36441 | TCTTCCAAAACAATC TTTG GAAC CAAA TTTTTTATATCAGCA CD2559 2959617 - 2959063 - | hypothetical protein recG 2961745 - 2959676 - | ATP-dependent DNA helicase CD2561 2963457 - 2961814 - | putative phosphatase TERM 3290 2961854 - 2961843 - G 71 -5.8 -4.51994 | TTAAGTAATAATAAA GAGG TTGT CCTC CATAATATAACTCTA CD2562 2963826 - 2963476 - | hypothetical protein rpmB 2964187 - 2964375 + | 50S ribosomal protein L28 TERM 3291 2964384 - 2964417 + T 100 -12.7 -3.96337 | opp_overlap 2964391, overlap 2964391 AGCTTAGTAACCACG TTTAAAAGCCTACTT CCGT AAGTAGGCTTTTTAA TTTAATCATTTTTAC TERM 3292 2964391 - 2964410 + T 100 -10.8 -5.01811 | opp_overlap 2964391, overlap 2964384 TAACCACGTTTAAAA GCCTACTT CCGT AAGTAGGC TTTTTAATTTAATCA TERM 3293 2964410 - 2964391 - T 95 -10.8 -4.12902 | opp_overlap 2964391 2964384 TAACCACGTTTAAAA GCCTACTT CCGT AAGTAGGC TTTTTAATTTAATCA CD2563 2965261 - 2964785 - | hypothetical protein TERM 3294 2965280 - 2965290 + H 70 -4 -5.14965 | opp_overlap 2965280, overlap 2965288 GTTCCTCCTAGACTA TAGA CCC TCTA TTTTTTAGTAAAGAT TERM 3295 2965383 - 2965408 + H 81 -5.7 -5.30339 | opp_overlap 2965403, overlap 2965377 2965403 CAGTAAAGATATTTT TTTATATTTTT ATTA AAAGATATAAA TTTTTATATTTTAAT TERM 3296 2965628 - 2965611 - g 75 -7.1 -4.13728 | TATATATGGTCAAAA TGAAGTT AATA AACTTCA ACAAATACTTTTTTA CD2564 2965480 - 2966241 + | MerR family transcriptional regulator TERM 3297 2966512 - 2966500 - T 74 -4.9 -5.10767 | opp_overlap 2966500 TATGTAATATAAAAA TCTAT ACT ATAGA CTTGATTATGGAAAG CD2565 2968429 - 2966501 - | putative transcriptional antiterminator TERM 3298 2966976 - 2966992 + g 81 -3.8 -5.5943 | TTAGTGATTGACTTA GATATA TTCTC TATATC TTTTTTTAATAGTTT TERM 3299 2968508 - 2968553 + H 72 -8.7 -2.68532 | opp_overlap 2968504 2968505 2968503, overlap 2968521 2968523 TCTAATAAAATTGTA TGATAATAATTTATTTCCA CTTCTATA TGGAAATTAGTTATTATCA TAATATAAATTTCCA CD2566 2968663 - 2969115 + | PTS system, IIA component CD2567 2969118 - 2969426 + | PTS system, IIB component TERM 3300 2969457 - 2969435 - f 100 -10 -5.7946 | TTCTTAATAAAAAAA TCTCACTCTA ATA TAGAATGAGA AAAATCAAAAATTAA CD2568 2969540 - 2970646 + | PTS system, IIC component TERM 3301 2970665 - 2970704 + F 79 -8.1 -4.10855 | opp_overlap 2970670, overlap 2970670 AAAAACTTAATTTTA GATAATTGAGAATTGAG TGTACT CTCAATTCTCAATTAAA TTTTGGGAGGATTTT TERM 3302 2970699 - 2970670 - f 95 -12.4 -3.52192 | opp_overlap 2970665 2970670 CTTAATTTTAGATAA TTGAGAATTGAG TGTACT CTCAATTCTCAA TTAAATTTTGGGAGG TERM 3303 2970670 - 2970699 + F 95 -12.4 -3.36823 | opp_overlap 2970670, overlap 2970665 CTTAATTTTAGATAA TTGAGAATTGAG TGTACT CTCAATTCTCAA TTAAATTTTGGGAGG CD2569 2970721 - 2973399 + | alpha-mannosidase TERM 3304 2973518 - 2973544 + T 70 -3.7 -5.09895 | TTTGTAAAATAAAAA GGTGAAACTTG TATAT TAGGATTCACC TTTTTTAAATAAATC CD2570 2976052 - 2973716 - | two-component sensor histidine kinase CD2571 2976740 - 2976024 - | two-component response regulator CD2572 2977810 - 2977154 - | putative nitroreductase CD2573 2978494 - 2977865 - | hydrolase TERM 3305 2978171 - 2978185 + g 72 -4.4 -5.1101 | opp_overlap 2978163 TTGACAATTACTTAC TATAAA TAA TTTATA TTTTTTAGATAGTAA TERM 3306 2978590 - 2978550 - R 86 -7.7 -4.85129 | ATTATATACTAAAAA GCAGATACAATCATAAATA TAT TTTACTTGATTGTATCTGC TCTACAATATAAAAC CD2574 2979266 - 2978625 - | putative thiamine pyrophosphokinase CD2575 2979946 - 2979275 - | ribulose-phosphate 3-epimerase CD2576 2980835 - 2979951 - | putative ATP/GTP-binding protein CD2577 2981670 - 2980933 - | short chain dehydrogenase TERM 3307 2981759 - 2981723 - R 78 -6.8 -4.83243 | gap 1, opp_overlap 2981723 TTTATACAAAACAAA CTGCCCTTT-AAAGAAA ATAT TTTCTATAAAAGGACAG CTCTTATTTTATTAA stk 2983787 - 2981778 - | serine/threonine-protein kinase and phosphatase stp 2984556 - 2983804 - | serine/threonine phosphatase CD2580 2985607 - 2984576 - | radical SAM protein rsmB 2986940 - 2985615 - | ribosomal RNA small subunit methyltransferase TERM 3308 2986992 - 2986973 - R 100 -10.8 -5.5762 | opp_overlap 2986951 2986972 2986971 ATTAAACATAAAAAA GGGTTGTT TCTA AACAACCC ACTTTACTTTTAGTC CD2582 2987712 - 2987002 - | putative membrane-associated neutral zinc metallopeptidase TERM 3309 2987573 - 2987590 + g 70 -5.7 -4.33582 | GTATATCCTCGACGT GTATTTA CTCT TAAATAC TTATTTGTTGTTGAA CD2583 2988533 - 2987772 - | hypothetical protein fmt 2989463 - 2988534 - | methionyl-tRNA formyltransferase def2 2989918 - 2989478 - | peptide deformylase 2 priA 2992425 - 2989936 - | putative primosomal protein N' coaBC 2993899 - 2992700 - | coenzyme A biosynthesis bifunctional protein rpoZ 2994170 - 2993904 - | DNA-directed RNA polymerase omega chain gmk 2994790 - 2994173 - | guanylate kinase TERM 3310 2994677 - 2994701 + g 74 -5.1 -4.9138 | TTTTCTTGTAGTAGC TGATACAGAAA GTT TTATTGTATCA TTTTCTTTAAGTAGT CD2589 2995701 - 2994820 - | hypothetical protein dapF 2996535 - 2995705 - | diaminopimelate epimerase TERM 3311 2996178 - 2996188 + g 70 -5.4 -4.68132 | overlap 2996184 CTTTTCCCATATTGA CTCT TAT AGAG TTTATTTCTCTATTG TERM 3312 2996613 - 2996587 - R 100 -11.8 -5.84432 | opp_overlap 2996586 2996585 TATAACATAAAAAAA TTCCCATAAACT TAT AATTTATGGGAA AAGTTTTGTAATGAC ltaE 2997856 - 2996822 - | low-specificity L-threonine aldolase TERM 3313 2998584 - 2998570 - g 81 -5.8 -5.27476 | GTGAAGAAAATAAAA TTATAG ATT CTATAA AAAGAGTCCCTTTTA TERM 3314 2999538 - 2999528 - g 76 -5.4 -5.02231 | GAAAAACAGTAAAAA GGAT ACT ATCC CATCTACAAAACCTC fbpA 2998152 - 2999927 + | fibronectin-binding protein TERM 3315 3000025 - 2999988 - T 81 -5.7 -5.28942 | opp_overlap 2999990, overlap 2999990 CATTCTAAATAAAAA TAGTGGCCTTCTTAT AAAGTACA ATAATAAGGCCACTT TCTAATTAGCTTACT TERM 3316 2999990 - 3000023 + T 79 -8.3 -4.07975 | opp_overlap 2999988 2999990 TTCTAAATAAAAATA GTGGCCTTCTTAT AAAGTACA ATAATAAGGCCAC TTTCTAATTAGCTTA TERM 3317 3000023 - 2999990 - T 80 -8.3 -4.27026 | opp_overlap 2999990, overlap 2999988 TTCTAAATAAAAATA GTGGCCTTCTTAT AAAGTACA ATAATAAGGCCAC TTTCTAATTAGCTTA CD2593 3001794 - 3000142 - | putative antibiotic resistance ABC transporter,ATP-binding protein TERM 3318 3000263 - 3000280 + g 76 -3.5 -5.47846 | overlap 3000265 ACAGTTGTAAGTCTA TTTTCTA ATAC TAGAAGA TTTTCTTTTTTGATT TERM 3319 3000303 - 3000314 + g 85 -2.2 -6.02919 | TTTTGATTTGGTTTT CTCT ACTA GGAG TTTTTTTATTTCTGC TERM 3320 3001148 - 3001167 + g 73 -5.8 -4.61527 | opp_overlap 3001148 3001166, overlap 3001166 ATGCCATCACTTAAA GCTTTTTT ATAT AAAAGAGC TTTTTCAAGCCTTTT uraA 3003316 - 3002093 - | uracil permease pyrR 3004121 - 3003588 - | PyrR bifunctional protein TERM 3321 3003876 - 3003886 + g 72 -4 -5.03715 | TCCTTTAACTACAGG TTCA ACA TGAA TTTTTTCCAAATCAT TERM 3322 3004254 - 3004233 - R 95 -5.9 -6.01369 | overlap 3004248 TAAACAACAAAAAAA CTTCTCATC ACAA GACAAGAAG CTCTTATATAAAAAA CD2596 3005392 - 3004481 - | putative pseudouridylate synthase lspA 3005843 - 3005397 - | lipoprotein signal peptidase TERM 3323 3005930 - 3005917 - R 100 -6.7 -6.0427 | opp_overlap 3005916 3005929, overlap 3005929 ATTATACAAAAAAAA TGCTC TAAA GAGCA ACTTTATTAAAATTG TERM 3324 3006142 - 3006090 - R 76 -9.5 -2.89564 | opp_overlap 3006090, overlap 3006095 TGTGTATTTTATAGA TTAAAGATTAATGATGTCTGTAATT TAA ACTTACAATCACCACTAATCTTCAA ACAAATATTTTTACT TERM 3325 3006137 - 3006095 - R 71 -7.2 -3.88766 | opp_overlap 3006090, overlap 3006090 ATTTTATAGATTAAA GATTAATGATGTCTGTAATT TAA ACTTACAATCACCACTAATC TTCAAACAAATATTT CD2598 3006932 - 3006153 - | putative oligosaccharide deacetylase CD2599 3007478 - 3006987 - | putative general stress protein TERM 3326 3007681 - 3007653 - R 80 -6.9 -4.99435 | gap 1, opp_overlap 3007653 TTCAACAATGAAAAA GAGACTTATCTC TATTTT GAGAT-AGTCTC TTCTTTGAACATAAT CD2600 3009156 - 3007735 - | putative carbon starvation CD2601 3010072 - 3009302 - | two-component response regulator CD2602 3011279 - 3010077 - | two-component sensor histidine kinase TERM 3327 3012085 - 3012102 + H 82 -5.7 -5.57888 | CTAGTGTTATTTTAT GTATTTT CTAT AAAATAC TTTTGTTTTTTTACT CD2603 3012145 - 3012891 + | putative response regulator TERM 3328 3014302 - 3014273 - T 83 -11 -2.68532 | GTCAAATTGACAGTA TTTCTGTATCTA TTATAT TAGATACAGAAA ATGAATCTTACAAAA TERM 3329 3015407 - 3015444 + T 87 -5.9 -5.65927 | AATACAATATGTATT TACCTTATAAAGT ATTAAAAAATTA ACTTTATAAGGTA TTTTTTATTTAAATA TERM 3330 3015675 - 3015696 + T 87 -5.9 -5.67063 | ATGTTAGAAGTTGTT TCAGAAGGC TATG GTTTTCTGA TTTTTTTATGCTCAG TERM 3331 3015802 - 3015819 + T 100 -9.9 -5.88565 | ATCTAACCCCTTTGA GATGAGC AAAA GCTCATC TTTTTTTATTATCAA trpS 3017017 - 3016016 - | tryptophanyl-tRNA synthetase mtnN 3017738 - 3017040 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 3332 3017765 - 3017796 + r 70 -5.9 -4.21194 | opp_overlap 3017752 3017769 3017789, overlap 3017767 3017769 AATTTTCTATATTAA AAAATCCGTCCTA AATCAA TAGGACGGATATA TTTTCCGTGGTACCA TERM 3333 3017767 - 3017794 + r 76 -8.5 -3.70674 | opp_overlap 3017752 3017769 3017789, overlap 3017765 3017769 TTTTCTATATTAAAA AATCCGTCCTA AATCAA TAGGACGGATA TATTTTCCGTGGTAC TERM 3334 3017769 - 3017792 + r 93 -11.1 -3.43007 | opp_overlap 3017769 3017789, overlap 3017767 3017765 TTCTATATTAAAAAA TCCGTCCTA AATCAA TAGGACGGA TATATTTTCCGTGGT TERM 3335 3017792 - 3017769 - R 100 -11.1 -5.21709 | opp_overlap 3017769 3017767 3017765, overlap 3017789 TTCTATATTAAAAAA TCCGTCCTA AATCAA TAGGACGGA TATATTTTCCGTGGT CD2612 3019515 - 3018112 - | putative amino acid permease TERM 3336 3018551 - 3018561 + g 76 -5.4 -5.03314 | TCTACTAAACTATCT GGAA ATA TTCC TTTTTTAACACTACC CD2613 3020012 - 3021088 + | peptidase TERM 3337 3021118 - 3021152 + T 100 -19 -4.15066 | opp_overlap 3021118, overlap 3021130 TGATAAAATTAAAAA GCCATATAAAAATGTT TTA AACATTTTTATATGGC TTTAATTTCTCAATC TERM 3338 3021152 - 3021118 - T 100 -19 -5.1417 | opp_overlap 3021118 3021130 TGATAAAATTAAAAA GCCATATAAAAATGTT TTA AACATTTTTATATGGC TTTAATTTCTCAATC CD2614 3022047 - 3021205 - | hypothetical protein TERM 3339 3021483 - 3021497 + g 71 -7.2 -3.71907 | overlap 3021481 CAACTTGTATTATCG CCTTAA AAT TTAAGG TATTTATAATTTTTC TERM 3340 3022080 - 3022105 + H 73 -6.9 -4.29348 | overlap 3022077 3022074 3022085 ATATTATTTTATTTA TTCAGTCGGTC GTAC GACCGATTTAA TTATTATTTTATATA TERM 3341 3022085 - 3022100 + H 82 -9 -4.18711 | overlap 3022080 3022077 3022074 ATTTTATTTATTCAG TCGGTC GTAC GACCGA TTTAATTATTATTTT TERM 3342 3022479 - 3022467 - g 71 -2 -5.37593 | TGTCAAATCAAAAAA TTCT CAAAT AGAA ATGGTTAACTTAATC TERM 3343 3022666 - 3022694 + G 75 -4 -5.20216 | gap 1 AAATATAATAGTAGC GAAAATGA-ACAG GATG CTGAATCATTTTC TTTTTTACTCATGTC CD2615 3022231 - 3022803 + | TetR family transcriptional regulator TERM 3344 3022830 - 3022864 + T 79 -7.3 -4.69324 | opp_overlap 3022830 AGATAATTAATAAAA GTGAACTATTTAAGT TATCT ACTTTAACAGTTCAC TTTCTTATTTATTCT TERM 3345 3022864 - 3022830 - T 95 -9.5 -4.82756 | opp_overlap 3022830 AGATAATTAATAAAA GTGAACTATTTAAGT TATCT ACTTTAACAGTTCAC TTTCTTATTTATTCT CD2616 3023301 - 3022966 - | hypothetical protein CD2617 3024237 - 3023365 - | hypothetical protein TERM 3346 3024474 - 3024509 + r 100 -10.1 -4.43477 | gap 1, opp_overlap 3024474 ATATTACATAAAAAA TCCCTATAGAAATCTA TAAAC TA-ATTTCTATAGGGA TTTTGGTTAACTAAC TERM 3347 3024509 - 3024474 - R 100 -10.1 -5.40625 | gap 1, opp_overlap 3024474 ATATTACATAAAAAA TCCCTATAGAAATCTA TAAAC TA-ATTTCTATAGGGA TTTTGGTTAACTAAC ileS 3027640 - 3024533 - | isoleucyl-tRNA synthetase TERM 3348 3027744 - 3027717 - R 100 -9.9 -5.32699 | opp_overlap 3027717 TTAAATACTAAAAAA CTCGCCCCCTT TAAACC AAAGGGACGAG TTATAAATCGCGTTA CD2619 3028667 - 3028140 - | cell-division initiation protein CD2620 3029487 - 3028702 - | putative RNA-binding cell division protein CD2621 3029754 - 3029497 - | hypothetical protein CD2622 3030231 - 3029773 - | hypothetical protein CD2623 3030984 - 3030271 - | putative alanine racemase TERM 3349 3030385 - 3030403 + g 100 -11.8 -4.24599 | opp_overlap 3030384 3030383 3030381, overlap 3030381 CATTGACAAAACATC CATCCCTA CAT TAGGGATG TTTAGTTCTTTTATT CD2624 3031620 - 3030985 - | hypothetical protein TERM 3350 3032048 - 3032058 + G 70 -4 -4.8622 | TTTATTGGTTCTATG TTGT TTC ACAA TTTTTAGTTACAAGG TERM 3351 3032713 - 3032703 - g 72 -4 -5.02074 | opp_overlap 3032703 TTAGGTTCTAAAAAA GATA TTA TATC TGTTGCTATTGAACC CD2625 3032001 - 3033041 + | hypothetical protein TERM 3352 3033326 - 3033359 + T 86 -7.5 -4.87389 | opp_overlap 3033326 ATTATTAAAATAAAA GCGATACATGAATTT TTAA ATGTCCATGTATCGC TTTATTTTTGCCATA TERM 3353 3033359 - 3033326 - T 93 -7.6 -5.14626 | opp_overlap 3033326 ATTATTAAAATAAAA GCGATACATGAA TTTTTAAATG TCCATGTATCGC TTTATTTTTGCCATA CD2626 3034868 - 3033504 - | hypothetical protein CD2627 3035154 - 3034885 - | hypothetical protein TERM 3354 3035438 - 3035390 - R 73 -7.8 -3.8062 | gap 1, opp_overlap 3035378 3035395, overlap 3035379 3035391 3035395 CAATTTTCATAATAA TGAAAGGTATTACTTAG-CAATC TCAT GATTTTCTAAATAATACCTTTCT AAAAATTATTTTTTT TERM 3355 3035437 - 3035391 - R 85 -11.3 -2.8789 | gap 1, opp_overlap 3035378 3035395, overlap 3035379 3035390 3035395 AATTTTCATAATAAT GAAAGGTATTACTTAG-CAATC TCAT GATTTTCTAAATAATACCTTTC TAAAAATTATTTTTT CD2628 3037399 - 3035444 - | hypothetical protein TERM 3356 3035685 - 3035667 - G 73 -8.2 -3.51934 | opp_overlap 3035665, overlap 3035665 TTTTTGTTAGAAATA CTTTCCCT ATA AGGAAAAG AATGTTCATTGGTAC TERM 3357 3037574 - 3037532 - R 100 -11.7 -5.38054 | gap 1, opp_overlap 3037532 3037530 3037528, overlap 3037573 TGTTATAAATAAAAA GCTACTTACTAAAGC-AAAC AGAC GTTTCACTTTAATAAGTAGC TATATTTTTATAACA spoIVA 3039075 - 3037582 - | stage IV sporulation protein A TERM 3358 3039335 - 3039309 - R 100 -16.8 -4.72729 | opp_overlap 3039303 TAAGTAAAATTAAAA TAGCCCTCTTTA TAT TAAAGAGGGCTA AAACAAATCTATTAT glyC 3040406 - 3039375 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) CD2631 3041039 - 3040425 - | hypothetical protein CD2632 3042399 - 3041074 - | putative GTP-binding protein CD2633 3043764 - 3042427 - | hypothetical protein TERM 3359 3043976 - 3043918 - R 79 -8.9 -3.49186 | gap 2, opp_overlap 3043924 3043939 3043975, overlap 3043921 3043924 3043939 TAGCTATAAAATAGA TTAGAACAAATAATATTCAAATTT--AAG TTT CTTAAAAATTTAAATATTATTTGTTCTTA AAAAAATTTTATAAA TERM 3360 3043973 - 3043921 - R 82 -10.6 -2.87772 | gap 2, opp_overlap 3043924 3043939, overlap 3043918 3043924 3043939 CTATAAAATAGATTA GAACAAATAATATTCAAATTT--AAG TTT CTTAAAAATTTAAATATTATTTGTTC TTAAAAAAATTTTAT CD2634 3044193 - 3043993 - | hypothetical protein CD2635 3045127 - 3044195 - | hypothetical protein CD2636 3046104 - 3045172 - | hypothetical protein TERM 3361 3045569 - 3045537 - G 72 -6.4 -4.3129 | opp_overlap 3045537 3045539 3045560 CATTTACCATTAAAA TAGGTCCTTCAAAA CTTAT TTTTGCAGGAACTA TATCTGCTATATCTG TERM 3362 3046171 - 3046152 - R 86 -2.9 -6.47325 | opp_overlap 3046143 AAAAAACAAAAAAAA TTCCCTT CTATTT AAGGAAA TTTTTTTGTAATATT CD2637 3047448 - 3046159 - | two-component sensor histidine kinase TERM 3363 3046781 - 3046800 + g 71 -7.2 -3.75051 | opp_overlap 3046781 3046780 AGTGTTTCAACAAAT CCACTTAT AGAT GTAAGTGG TGTTTTAAGTTCATG CD2638 3048169 - 3047477 - | two-component response regulator CD2639 3048945 - 3048184 - | hypothetical protein CD2640 3049403 - 3048942 - | putative ATP-binding protein CD2641 3049688 - 3049425 - | hypothetical protein TERM 3364 3049740 - 3049755 + r 73 -7.6 -3.76125 | opp_overlap 3049740 CGAAGTAAAAAAAAA TGACCT ATAT AGGTCA TTTAAATTAAAATAA TERM 3365 3049755 - 3049740 - R 100 -7.6 -6.23209 | opp_overlap 3049740 CGAAGTAAAAAAAAA TGACCT ATAT AGGTCA TTTAAATTAAAATAA sigG 3050565 - 3049792 - | sporulation sigma factor SigG sigE 3051379 - 3050657 - | sporulation sigma factor SigE spoIIGA 3052249 - 3051404 - | sporulation sigma-E factor processing peptidase CD2645 3053840 - 3052566 - | putative extracellular solute-binding protein TERM 3366 3054013 - 3054039 + r 82 -5.4 -5.50499 | overlap 3054002 ATACTAAAAACTTAC TTTTTAAATTTT ATC AATATTTAAAAA TTTTTTTAAGTCTAG TERM 3367 3054112 - 3054085 - R 80 -8.6 -4.33165 | opp_overlap 3054091, overlap 3054091 CTAAATTGAGCAAAA TAAAAAGAAGTC TATT GACTTCTTTATA AGCTTACATATTATC TERM 3368 3054106 - 3054091 - R 100 -7.6 -5.50723 | opp_overlap 3054091, overlap 3054085 TGAGCAAAATAAAAA GAAGTC TATT GACTTC TTTATAAGCTTACAT TERM 3369 3054091 - 3054106 + r 75 -7.6 -3.9279 | opp_overlap 3054091 3054085 TGAGCAAAATAAAAA GAAGTC TATT GACTTC TTTATAAGCTTACAT ftsZ 3055283 - 3054123 - | cell division protein TERM 3370 3055451 - 3055481 + r 70 -2.7 -5.52023 | opp_overlap 3055451 GTATAAAATAATTTA CGTATATATTAAA TGCTC TTTAATTTTTACG TTTTTTGTTCATAAT sbp 3055823 - 3055470 - | hypothetical protein CD2648 3056596 - 3055922 - | hypothetical protein TERM 3371 3056423 - 3056441 + g 91 -5.4 -5.88476 | overlap 3056419 3056418 3056438 AGTTTTTTTGTTCTT TTTAAGAG TTT CTTTTAAA TTTTTTATTTCTTTT CD2649 3057299 - 3056601 - | hypothetical protein CD2650 3058062 - 3057322 - | putative cell division protein TERM 3372 3058268 - 3058324 + r 95 -12.7 -3.63608 | opp_overlap 3058272, overlap 3058268 3058320 CTGTATACATACAAA TAAACCCCTAATTTATAATAATTTAGA AAA TCTAATATATTATAAATTAGGGGTAAA TATTTACTTATCTTT TERM 3373 3058320 - 3058272 - R 100 -17.9 -4.66625 | opp_overlap 3058268 3058268 ATACATACAAATAAA CCCCTAATTTATAATAATTTAGA AAA TCTAATATATTATAAATTAGGGG TAAATATTTACTTAT murG 3059561 - 3058332 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 3374 3058554 - 3058605 + g 88 -6 -5.626 | ATCAACCAAAAGTTC TCTATCTCCTAAAAGTTTAAATAC TGCT GTATTTAGGCTCTCTGGAGTTAGA TTTTTTTCTAAAATA TERM 3375 3058783 - 3058769 - G 72 -8.6 -3.00039 | opp_overlap 3058768 3058768 3058771, overlap 3058768 3058771 TACCTATAACCAAAT CACTTG CTG CAAGTG CATTTGCCATATCTT ftsW 3060706 - 3059576 - | cell division/stage V sporulation protein TERM 3376 3060431 - 3060455 + g 81 -6.5 -5.06414 | opp_overlap 3060416 3060413 3060427 3060425, overlap 3060427 CAATAATAATACTAC TGCTATAGC TCCAATT GCTGTAGCA TTTTTCTTCCAAAAA TERM 3377 3060646 - 3060630 - G 76 -9.5 -3.14195 | overlap 3060628 3060626 AATACTAAAAGCATA GTAGTGT AAA ACACTAC TCCATCAAATTCAGT murD 3062113 - 3060758 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase mraY 3063100 - 3062132 - | phospho-N-acetylmuramoyl-pentapeptide-transferas e TERM 3378 3063068 - 3063056 - G 71 -4.8 -4.7871 | AATTACTATTAAAAA CGCA ATCAA TGCG GTGTACGTAAGCTCT murF 3064514 - 3063141 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alan ine ligase TERM 3379 3064593 - 3064564 - R 100 -10.2 -4.71426 | CTCTTAGCAACAAAA GGCAATGTATAC CGTTAT ATATACATTGCC TACGATAACTCTTAA spoVD 3066660 - 3064681 - | stage V sporulation protein D (sporulation specific penicillin-binding protein) CD2657 3067019 - 3066672 - | hypothetical protein TERM 3380 3067199 - 3067162 - R 78 -5.8 -5.27206 | TATACACAACAAAAA CCTATAAATTCACTTA TACTTT TATATGAATCTATAGG TTAGATATTAATTTC mraW 3068435 - 3067500 - | S-adenosyl-methyltransferase TERM 3381 3068255 - 3068265 + g 76 -5.4 -5.1244 | overlap 3068251 ATCTCTCTTTTGCTG TGCT TAT AGCA TTTTTATCTTGGTCA lgt 3069211 - 3068465 - | prolipoprotein diacylglyceryl transferase TERM 3382 3069467 - 3069444 - R 78 -6.8 -4.8622 | opp_overlap 3069444 TTTTTTAATCAAAAA GATTGATGCA TATA TACATCAACC TCTTCTAATTCTTAT CD2660 3070906 - 3069605 - | peptidase TERM 3383 3070120 - 3070104 - G 88 -9.5 -4.11216 | TTGCTATCTTTAAAA CCTATGT TGA ACATAGG CATAGATATAGGGAA TERM 3384 3070621 - 3070602 - G 76 -9.4 -3.09831 | opp_overlap 3070599, overlap 3070599 GTCATTGTAAAATTA GTAAATGC ATTT GCATTTAC TCCTAATTTTGAAAA CD2661 3072171 - 3070906 - | peptidase CD2662 3072487 - 3073584 + | putative GTP-binding protein TERM 3385 3073694 - 3073734 + T 82 -5.8 -5.59357 | gap 1, opp_overlap 3073694 3073686 TTAAAAATAAAAGAA GAGTATTTCA-AATGATTT GTAT AAATTATTATGAAAAACTC TTTTTTTGATATAAT TERM 3386 3073999 - 3074023 + T 90 -7.2 -5.35222 | opp_overlap 3073999 TTTTTACATAAAAAA GTGAACATTG ATTAA CAAAGTTCAC TTTTTTATAAATTTT TERM 3387 3074023 - 3073999 - T 90 -7.2 -5.36441 | opp_overlap 3073999 TTTTTACATAAAAAA GTGAACATTG ATTAA CAAAGTTCAC TTTTTTATAAATTTT CD2663 3076341 - 3074062 - | putative signaling protein TERM 3388 3075078 - 3075094 + g 71 -2.3 -5.46706 | GTTCACATATTTCTA TAATTGA CTC TCTATTA TTTTTCTTTTCAAAT TERM 3389 3075980 - 3075968 - G 72 -6.3 -4.21438 | opp_overlap 3075967 GATTTTAAGAAATAA TCTCT TTT AGAGA AGTCTTCTATATAAC TERM 3390 3076579 - 3076550 - R 93 -7.4 -5.76633 | opp_overlap 3076550 TTACATATAAAAAAA TGTAATATCAAA GTGAAG CTTGATATTACA TTTTTGTTCTTGTAT TERM 3391 3076550 - 3076579 + r 87 -6.7 -5.35721 | gap 1, opp_overlap 3076550 TTACATATAAAAAAA TGTAATATCAAAGT GAA GCTT-GATATTACA TTTTTGTTCTTGTAT murE 3078066 - 3076612 - | putative UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelat e ligase TERM 3392 3078311 - 3078293 - g 71 -2.4 -5.43414 | ATTAGAGATAAAAAA GATATACA ATT TGAATACC ATAATCATGATTTTA TERM 3393 3078799 - 3078838 + G 73 -3.6 -5.28176 | opp_overlap 3078803 3078806 3078811, overlap 3078803 CTATATAAATTCAAA TATAGATGATAAGCTTTC AATA GATAGCATATCGTCTGAA TTTTTTATAAGTAAG CD2665 3078230 - 3079099 + | AraC family transcription regulator TERM 3394 3079168 - 3079130 - T 79 -7 -4.65916 | opp_overlap 3079121 3079130 TTTATTTTAATAAAA CTTGAAGTATTAGT GTATTTATCTT ACTAATACCTCAAG TTTTTTAATGTTTTA TERM 3395 3079130 - 3079168 + T 81 -5.5 -5.36314 | opp_overlap 3079130, overlap 3079121 TTTATTTTAATAAAA CTTGAAGTATTAGTG TATTTATCT TACTAATACCTCAAG TTTTTTAATGTTTTA crr 3079803 - 3079312 - | PTS system, glucose-specific IIA component ptsG 3081384 - 3079813 - | PTS system, glucose-specific IIBC component TERM 3396 3081000 - 3081017 + g 73 -8.5 -3.41569 | overlap 3080998 ATACCCCTGTTTGAA TTGTTGG TATT CCAACAA TATTTGCATACATAG licT 3082529 - 3081687 - | putative transcription antiterminator TERM 3397 3082620 - 3082576 - R 82 -4.6 -5.64274 | opp_overlap 3082605 TTATTCATAAAAAAA TACCTAAATTAAGATACA ATTCACCTG TATACCTTAACCTAGGTA TTGCCTGCTTACCAG CD2669a 3084832 - 3082790 - | putative Na(+)/H(+) antiporter TERM 3398 3084593 - 3084607 + g 71 -5.7 -4.43501 | CAAAATTGGTTTTCT GAGCT CTAAT AGCTC TTTTCTCGATACATT appF 3085955 - 3084984 - | oligopeptide ABC transporter, ATP-binding protein TERM 3399 3085092 - 3085104 + g 77 -7.7 -4.1711 | opp_overlap 3085090 TGTATGAAACTTACA TCCAC TTG GTGGA TTTGTTGGAGATGGT TERM 3400 3085177 - 3085190 + g 85 -8.1 -4.61868 | TCTTGTATTGGTACT GCGCT CATA AGCGC TTTTGTATATGGATG appD 3086933 - 3085956 - | oligopeptide transporter, ATP-binding protein appA 3087152 - 3088711 + | oligopeptide ABC transporter, substrate-binding protein TERM 3401 3089039 - 3089029 - g 70 -5.4 -4.58685 | opp_overlap 3089033 AAACTGGTTGAAAAA CACT TTA AGTG GAAACTTAGGTATTT appB 3088817 - 3089776 + | oligopeptide ABC transporter, permease protein appC 3089779 - 3090591 + | oligopeptide ABC transporter, permease protein TERM 3402 3090603 - 3090654 + T 72 -7.6 -3.54543 | opp_overlap 3090605 3090616, overlap 3090605 3090616 TTAACAAATTTTATA TAGAAAATAAAAACAGTGATTATC TAAA GATATACACTGTTTTTATTTTTCG TTTAAAAAAATACAT TERM 3403 3090605 - 3090653 + T 79 -10 -2.72511 | gap 1, opp_overlap 3090605 3090616, overlap 3090603 3090616 AACAAATTTTATATA GAAAA-TAAAAACAGTGATTATC TAAA GATATACACTGTTTTTATTTTTC GTTTAAAAAAATACA TERM 3404 3090652 - 3090605 - T 82 -10.2 -2.94595 | opp_overlap 3090605 3090603 3090616, overlap 3090616 AACAAATTTTATATA GAAAATAAAAACAGTGATTATC TAAA GATATACACTGTTTTTATTTTT CGTTTAAAAAAATAC TERM 3405 3090641 - 3090616 - T 79 -4.7 -5.58522 | opp_overlap 3090605 3090603 3090616, overlap 3090605 TATAGAAAATAAAAA CAGTGATTATC TAAA GATATACACTG TTTTTATTTTTCGTT TERM 3406 3090616 - 3090641 + T 84 -4.7 -5.67529 | opp_overlap 3090616 3090605, overlap 3090605 3090603 TATAGAAAATAAAAA CAGTGATTATC TAAA GATATACACTG TTTTTATTTTTCGTT CD2675 3091709 - 3090807 - | LysR family transcriptional regulator TERM 3407 3091732 - 3091747 + H 73 -3.4 -5.58179 | opp_overlap 3091732 CCCCTTCCCCAAAAG TATAAT TTAG ATTATA TTTTTTCTTCTAATG thlA2 3092064 - 3093242 + | putative acetyl-CoA acetyltransferase ctfA 3093251 - 3093907 + | butyrate--acetoacetate CoA-transferase subunit A ctfB 3093907 - 3094572 + | butyrate--acetoacetate CoA-transferase subunit B TERM 3408 3095021 - 3095011 - g 70 -5.4 -4.56153 | opp_overlap 3095011 TTATGATAAAAATAA TGCT GAC AGCA CCTTTTATAGCTACT bdhA 3094677 - 3095453 + | 3-hydroxybutyrate dehydrogenase TERM 3409 3095481 - 3095508 + F 93 -11.4 -3.40403 | overlap 3095506 3095506 TAGTTATTATATTTA GGGCTTGAAGAA AGTA TTCTTCAGGTCC TTCTACTAAGGAGGG TERM 3410 3096343 - 3096333 - g 89 -4 -5.86965 | opp_overlap 3096333 ATTTATGAAAAAAAA TGTA ATT TACA TAGCTTTAATAGTTG TERM 3411 3096721 - 3096731 + G 72 -6.8 -4.18817 | overlap 3096719 ATACTAACTATAGTT CCAC AAA GTGG TGTTTTTCTTACATT CD2680 3095530 - 3096864 + | putative permease TERM 3412 3096894 - 3096882 - f 70 -4.9 -4.76478 | TAAAACAAATTAAAA TTCAT AAT ATGAA AGGTGGTGTCTCAAA CD2681 3097360 - 3098292 + | putative calcium-chelating exported protein TERM 3413 3098365 - 3098343 - T 81 -5.6 -5.31456 | opp_overlap 3098320 3098315 3098343 3098352, overlap 3098320 3098345 3098352 CTAAGTGATAAAAAA CACAAATGAG ATA CTCTTTTGTA TCTATTTTAAAATTA TERM 3414 3098363 - 3098345 - T 70 -6 -4.28383 | opp_overlap 3098320 3098315 3098343 3098352, overlap 3098320 3098343 3098352 AAGTGATAAAAAACA CAAATGAG ATA CTCTTTTG TATCTATTTTAAAAT nifJ 3102224 - 3098685 - | pyruvate-flavodoxin oxidoreductase TERM 3415 3102253 - 3102275 + r 86 -4.2 -5.88197 | opp_overlap 3102253, overlap 3102255 3102257 CTTGATAGCTACAAT TGTACTTGTT TAT AACAAGTCTA TTTTTTTATATTTAC TERM 3416 3102257 - 3102271 + r 70 -7.2 -3.83161 | opp_overlap 3102253, overlap 3102255 3102253 ATAGCTACAATTGTA CTTGTT TAT AACAAG TCTATTTTTTTATAT TERM 3417 3102725 - 3102695 - R 100 -11.4 -4.7173 | TATTACATTTAAAAA TATGCTAGCAAATA AAA TATCTACTAGCATA AAGTCTATTTATAAT CD2683 3103311 - 3102742 - | putative propanediol utilization protein CD2684 3103997 - 3103383 - | putative iron-sulfur flavoprotein TERM 3418 3103957 - 3103970 + g 89 -6.7 -5.42265 | ATTATTATAATCTCT GGACT TTTA AGTCC TTTTTTATCGTTTGA CD2685 3105768 - 3103999 - | putative regulatory protein CD2686 3106275 - 3105805 - | hypothetical protein CD2687 3106455 - 3106916 + | hypothetical protein TERM 3419 3106984 - 3106939 - T 100 -12.3 -4.92783 | opp_overlap 3106939, overlap 3106926 3106960 AACCTATTATAAAAA GGCAATTTATTTAATAAAAAA TATT TTTAATATTAAATAAATTGCC TTTTTAATTTTGGAC TERM 3420 3106939 - 3106984 + T 100 -12.3 -5.0925 | opp_overlap 3106926 3106939 3106960 AACCTATTATAAAAA GGCAATTTATTTAATAAAAAA TATT TTTAATATTAAATAAATTGCC TTTTTAATTTTGGAC TERM 3421 3106970 - 3106960 - T 70 -2.6 -5.4833 | opp_overlap 3106939, overlap 3106939 TTATTTAATAAAAAA TATT TTT AATA TTAAATAAATTGCCT TERM 3422 3107323 - 3107283 - T 100 -10.8 -6.11243 | gap 1, opp_overlap 3107293 3107295 ATTTAATAAAAAAAA GCTATCTC-AATTTAGAAA TTAC TTTCTATATTTGAGATAGC TCTAGCTAAACTAAT TERM 3423 3107342 - 3107374 + T 70 -7.4 -3.80855 | gap 1, opp_overlap 3107340 3107345, overlap 3107345 AGCTAAACTAATAGC CA-ATAGTTATAAAT AATT ATTTATAACTATCTG TTGCTTTTTCCAGCC TERM 3424 3107370 - 3107345 - T 80 -9.3 -3.22877 | opp_overlap 3107342 3107345, overlap 3107340 TAAACTAATAGCCAA TAGTTATAAAT AATT ATTTATAACTA TCTGTTGCTTTTTCC TERM 3425 3107345 - 3107370 + T 82 -9.3 -3.30457 | opp_overlap 3107345 3107340, overlap 3107342 TAAACTAATAGCCAA TAGTTATAAAT AATT ATTTATAACTA TCTGTTGCTTTTTCC sspA 3107589 - 3107368 - | small acid-soluble spore protein A CD2689 3108899 - 3107673 - | putative lipoprotein TERM 3426 3108592 - 3108608 + g 77 -8.1 -3.83559 | GCTTTATCACTCTCT GGAAAAA CCC TTTTTCC TCTTTCTGTTTTAGT CD2690 3109893 - 3108961 - | putative membrane-associated phosphatase TERM 3427 3109968 - 3109931 - R 79 -10.1 -2.69449 | opp_overlap 3109937, overlap 3109937 TTTTATATAATTAAC TAAAAAGCACTAACTCC CTTA GAAATTAGTGCTTTTGA TTCACATTTAAATCT TERM 3428 3109962 - 3109937 - R 100 -9.1 -4.9445 | opp_overlap 3109937, overlap 3109931 ATAATTAACTAAAAA GCACTAACTCC CTTA GAAATTAGTGC TTTTGATTCACATTT hpt 3110509 - 3109982 - | putative phosphoribosyltransferase CD2692 3110738 - 3111814 + | putative aminotransferase TERM 3429 3111881 - 3111855 - T 100 -10.3 -5.34555 | opp_overlap 3111855 TTATACCATAAAAAA TGAGCTATCTC TATTT GAGATAACTCA TTTTTGATTATTAAA TERM 3430 3111855 - 3111881 + T 91 -8.1 -4.99435 | opp_overlap 3111855 TTATACCATAAAAAA TGAGCTATCTC TATTT GAGATAACTCA TTTTTGATTATTAAA CD2693 3113108 - 3111900 - | putative sodium:dicarboxylate symporter TERM 3431 3113274 - 3113250 - R 86 -3.8 -6.09888 | gap 1, opp_overlap 3113250 TGTTAATAAAAAAAA GAATAACATAT ATAA AT-TGTTATTC TTCTTCATCTTTTAT CD2694 3113658 - 3113269 - | hypothetical protein asnA 3114772 - 3113762 - | asparagine synthetase AsnA TERM 3432 3114836 - 3114806 - R 100 -11.2 -5.52384 | opp_overlap 3114806 TTTCCATTAAAAAAA CCCTTCATCCCTAT ATA AAAGGGACGAAAGG TTGCTTTTCCGCGGT CD2696 3116401 - 3115211 - | putative aminotransferase TERM 3433 3115907 - 3115918 + g 75 -4.4 -5.20333 | CAGTACTTTATTGTT GCTA CACT TAGC TTTTTCTTCTAAATC TERM 3434 3116629 - 3116583 - R 100 -11.3 -4.371 | opp_overlap 3116586, overlap 3116586 TTCATTATATCAAAA TAAGATTGCTCATATTAATTA TTTTC TAATTAACATAAGCAATCTTT TTCTATAACTTCTAT TERM 3435 3116586 - 3116626 + r 91 -8.6 -5.00642 | opp_overlap 3116586 3116583 ATTATATCAAAATAA GATTGCTCATATTAATTA TTTTC TAATTAACATAAGCAATC TTTTTCTATAACTTC TERM 3436 3116626 - 3116586 - R 100 -13 -4.29905 | opp_overlap 3116586, overlap 3116583 ATTATATCAAAATAA GATTGCTCATATTAATTA TTTTC TAATTAACATAAGCAATC TTTTTCTATAACTTC CD2697 3117803 - 3116682 - | putative amidohydrolase CD2698 3118349 - 3117864 - | hypothetical protein CD2699 3119019 - 3118351 - | hypothetical protein TERM 3437 3119312 - 3119256 - H 89 -9.1 -4.58395 | opp_overlap 3119267, overlap 3119267 CTTATCTTGCAAAAA TAATTTCAAAATAGGTTTTTATAGGAT AAA ATCCTAAAAAAACCTATTATTTAATCA AATATATAAATTTAT TERM 3438 3119301 - 3119267 - H 100 -14.6 -4.26634 | opp_overlap 3119267, overlap 3119256 AAAATAATTTCAAAA TAGGTTTTTATAGGAT AAA ATCCTAAAAAAACCTA TTATTTAATCAAATA TERM 3439 3119267 - 3119301 + H 100 -14.6 -4.00756 | opp_overlap 3119267 3119256 AAAATAATTTCAAAA TAGGTTTTTATAGGAT AAA ATCCTAAAAAAACCTA TTATTTAATCAAATA CD2700 3119409 - 3121433 + | putative sigma54-interacting regulatory protein TERM 3440 3121540 - 3121568 + T 72 -4.7 -4.99435 | gap 1, opp_overlap 3121540 3121565 ATTTATATTAAAAAC GAAGC-TATCTC AACATA GGGATAAGCTTC TTTTTAATTGTTAAA CD2701 3122850 - 3121663 - | putative lipoprotein TERM 3441 3123010 - 3122967 - R 100 -10.6 -4.75776 | AATCCAATCTAAAAA GTACTATGGGTAGATT AGGTTTAGATTA AACCTACCCATAGTAC TAAAAATTAATATAT brnQ 3124335 - 3123052 - | putative branched-chain amino acid transport system carrier protein CD2703 3125117 - 3124464 - | pentapeptide repeat-containing protein TERM 3442 3125568 - 3125581 + H 80 -2.5 -6.04953 | ATGTTCTATTCTATC TATAT GAAT ATATA TTTTTTTGTTTATAT TERM 3443 3126908 - 3126896 - g 74 -6.3 -4.47183 | opp_overlap 3126896 TAGTAGCTAAAGAAA CTGAT AAA ATCAG TATTACACTTTGGAT CD2704 3125620 - 3126963 + | putative permease TERM 3444 3127031 - 3127076 + F 77 -7.9 -4.03978 | opp_overlap 3127036 3127044, overlap 3127036 3127044 ATTTATTTTAAATTT ATAAATAGCAAAATCACTTTA TATG TAAATTGATTTTGCTATTAAC TTTGTATAGAAAATT TERM 3445 3127036 - 3127071 + F 95 -12.2 -3.35695 | opp_overlap 3127036 3127044, overlap 3127031 3127044 TTTTAAATTTATAAA TAGCAAAATCACTTTA TATG TAAATTGATTTTGCTA TTAACTTTGTATAGA TERM 3446 3127071 - 3127036 - f 100 -12.2 -4.02132 | opp_overlap 3127031 3127036 3127044, overlap 3127044 TTTTAAATTTATAAA TAGCAAAATCACTTTA TATG TAAATTGATTTTGCTA TTAACTTTGTATAGA CD2705 3127142 - 3128506 + | putative amidohydrolas TERM 3447 3128519 - 3128575 + T 100 -10.8 -5.04908 | gap 1, opp_overlap 3128531 3128537 3128549 TAACATAAATTTCAA TTGTTTTGTAAATATGA-ATATATAAA TATA TTTATATACATCATATATACAAAACAA TTGTTTTTTTATTTT CD2706 3130552 - 3128684 - | hypothetical protein TERM 3448 3130659 - 3130631 - R 100 -9.1 -5.50499 | opp_overlap 3130628 3130631 3130633 3130652 3130655 TTATACGCAAAAAAA TATTACTAGAAAT TGA AATTCTAGTAATA TCCTTATTATTAATT TERM 3449 3130631 - 3130659 + r 74 -9.1 -3.04982 | opp_overlap 3130631, overlap 3130628 3130633 3130652 3130655 TTATACGCAAAAAAA TATTACTAGAAAT TGA AATTCTAGTAATA TCCTTATTATTAATT CD2707 3132002 - 3130785 - | putative transport protein TERM 3450 3132020 - 3132035 + r 72 -4.8 -4.9792 | TTTTTCTCCCATTCT TGTTAA TTTA TTAACA TTTTTGTGTACAATA ydiB 3133065 - 3132202 - | shikimate 5-dehydrogenase TERM 3451 3132879 - 3132893 + g 79 -5.8 -5.1356 | TAGTAACATTGGCTC CTTTTA TAT TAAAAG TTTTTATTGCTAAAA TERM 3452 3133092 - 3133134 + r 78 -6.6 -4.82212 | opp_overlap 3133090, overlap 3133093 CCTCCCAATATTATC ATTTTCTTTGCAAATAAC CTATTCA GTTATTTACAAAGAAAAA TTTATTTATTATTTA TERM 3453 3133093 - 3133133 + r 87 -10.1 -3.46887 | opp_overlap 3133090, overlap 3133092 CTCCCAATATTATCA TTTTCTTTGCAAATAAC CTATTCA GTTATTTACAAAGAAAA ATTTATTTATTATTT CD2709 3135069 - 3133147 - | putative NADH-dependent flavin oxidoreductase CD2710 3135996 - 3135148 - | hypothetical protein CD2711 3136409 - 3137290 + | LysR family transcriptional regulator TERM 3454 3137303 - 3137324 + T 70 -3.7 -5.18715 | TAATTTATTAATAAA GGGGTTATT TTTA AATATCCTC TTTTATTCTTTTTAT TERM 3455 3137373 - 3137352 - T 100 -8.9 -6.14618 | opp_overlap 3137352 TATAAAATAAAAAAA TCTATACTT TTAA AAGTATAGA TTCCTAACTGACAGT TERM 3456 3137352 - 3137373 + T 75 -8.9 -3.18383 | opp_overlap 3137352 TATAAAATAAAAAAA TCTATACTT TTAA AAGTATAGA TTCCTAACTGACAGT CD2712 3138361 - 3137498 - | hypothetical protein TERM 3457 3138486 - 3138438 - R 78 -5.8 -5.21709 | gap 2, opp_overlap 3138438 TTTTATACTAAAAAA TTGAGATGTAAAA--CAATCAA GCTTTTA TTGATTGAATTTCACATCTCAA TTATAATTATTTTTC CD2713 3140477 - 3138516 - | cell surface protein galE 3141575 - 3140562 - | UDP-glucose 4-epimerase gtaB 3142474 - 3141599 - | UTP--glucose-1-phosphate uridylyltransferase TERM 3458 3142586 - 3142607 + r 100 -11.7 -4.27483 | opp_overlap 3142586, overlap 3142580 TATAAGATAATATAA GGTAGATGA AATT TCATCTACC TTTAGTTTTATAAGT TERM 3459 3142607 - 3142586 - R 100 -11.7 -3.85527 | opp_overlap 3142586 3142580 TATAAGATAATATAA GGTAGATGA AATT TCATCTACC TTTAGTTTTATAAGT CD2715A 3142986 - 3142666 - | hypothetical protein CD2716 3144967 - 3142976 - | hypothetical protein TERM 3460 3144304 - 3144318 + g 86 -7.2 -5.33848 | opp_overlap 3144300, overlap 3144300 CTATTTCACAATCTT TAGGAA GAT TTCCTA TTTTTTGGTTATCCT TERM 3461 3145065 - 3145018 - R 85 -8.1 -4.6971 | opp_overlap 3145060 3145060 TAAAGGTGAATAAAA TGTCTCAAAACAAATAATATT TTTTTT AATACTTTTTATTCTGAGACA TAGTTTCTCCTTTTT CD2717 3147633 - 3145090 - | putative surface protein TERM 3462 3147894 - 3147877 - H 100 -8.5 -6.02919 | opp_overlap 3147877 TTACAAATAAAAAAA CATCAGT TTAA ACTGATG TTTTTGACTATCGAA TERM 3463 3147877 - 3147894 + H 85 -8.5 -4.70659 | opp_overlap 3147877 TTACAAATAAAAAAA CATCAGT TTAA ACTGATG TTTTTGACTATCGAA CD2718 3148377 - 3149054 + | putative sortase B TERM 3464 3149063 - 3149098 + F 91 -10.7 -3.83188 | opp_overlap 3149066 3149068 3149070, overlap 3149062 3149064 3149066 GATTTAAAAACTCAC AGACACAGTTTAAAA CAATAA TTTTAAACTGTGTCA TCTTTTATACCTATA TERM 3465 3149064 - 3149097 + F 100 -14.2 -2.8919 | opp_overlap 3149066 3149068 3149070, overlap 3149063 3149062 3149066 ATTTAAAAACTCACA GACACAGTTTAAAA CAATAA TTTTAAACTGTGTC ATCTTTTATACCTAT TERM 3466 3149095 - 3149066 - f 90 -11.7 -3.02973 | opp_overlap 3149064 3149063 3149062 3149066, overlap 3149068 3149070 TTAAAAACTCACAGA CACAGTTTAAAAC AATA ATTTTAAACTGTG TCATCTTTTATACCT TERM 3467 3149066 - 3149095 + F 87 -11 -2.98789 | opp_overlap 3149066 3149068 3149070, overlap 3149064 3149063 3149062 TTAAAAACTCACAGA CACAGTTTAAAA CAATAA TTTTAAACTGTG TCATCTTTTATACCT TERM 3468 3149093 - 3149068 - f 71 -8.5 -3.0587 | opp_overlap 3149066 3149064 3149063 3149062, overlap 3149066 3149070 AAAAACTCACAGACA CAGTTTAAAAC AATA ATTTTAAACTG TGTCATCTTTTATAC TERM 3469 3149209 - 3149189 - f 100 -9.1 -6.04419 | opp_overlap 3149189 AAAACAATAAAAAAA GACTATGCT AAA AACATAGTC TTTACTGGAGCTGGT TERM 3470 3151752 - 3151763 + F 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 3471 3151825 - 3151840 + F 81 -10.4 -2.71011 | overlap 3151839 GTAGTATTTAGCCTT GGAGGG TGGT CCCTCC TGCTTCCCACAGGGT TERM 3472 3151989 - 3152010 + F 91 -10.3 -3.62096 | GATATGTCCGCAACC CCAATAAAG AAAA CTTTATTGG TTTGGGCTAATCCGC TERM 3473 3152548 - 3152504 - f 75 -8.2 -3.53091 | gap 1, opp_overlap 3152498, overlap 3152505 ATCCCGTTGCTTAAA GTGCTAATTTTGAGTATTCGT AAAA ACGAACCCTCAAAATTAA-AC AGTAGGTAATTCTCC TERM 3474 3153275 - 3153263 - f 85 -10.5 -3.05463 | AGCTGCGGCACCGAA GGGGG TAA CCCCC GACACCTAGTACTCA TERM 3475 3153918 - 3153933 + F 70 -7.6 -3.41125 | ATTATCCCGTATTAG CATACC TTTC GGTATG TTATCCGTGTGTACA CD2719 3154447 - 3155385 + | polysaccharide deacetylase CD2720 3157130 - 3155757 - | hypothetical protein TERM 3476 3156409 - 3156431 + g 72 -6.4 -4.2803 | opp_overlap 3156406 3156410, overlap 3156406 3156404 3156410 AGAAATCCCAAAGCT ACTAAAATAG TTG CTATTTTAGA TTTTCCATTGAACTC TERM 3477 3156410 - 3156430 + g 78 -9.9 -3.16336 | opp_overlap 3156406 3156410, overlap 3156406 3156404 3156409 GAAATCCCAAAGCTA CTAAAATAG TTG CTATTTTAG ATTTTCCATTGAACT TERM 3478 3156430 - 3156410 - G 76 -9.9 -2.6704 | opp_overlap 3156406 3156404 3156410 3156409, overlap 3156406 GAAATCCCAAAGCTA CTAAAATAG TTG CTATTTTAG ATTTTCCATTGAACT CD2721 3158681 - 3157359 - | two-component sensor histidine kinase CD2722 3159378 - 3158674 - | two-component response regulator CD2723 3160625 - 3159561 - | hypothetical protein CD2724 3161326 - 3160628 - | polysaccharide deacetylase CD2725 3162414 - 3161317 - | putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase glyA 3163981 - 3162737 - | putative serine hydroxymethyltransferase TERM 3479 3162949 - 3162933 - G 74 -9.5 -2.85545 | opp_overlap 3162932 3162931 CTTGTAACAAGAGCA CCATTTG GGT CAAATGG AATTGTATTTTTATT TERM 3480 3164909 - 3164886 - g 70 -9 -2.63089 | opp_overlap 3164886, overlap 3164883 TACTAGTTGAAATAG GCATTTTAGA TGAC CCTAAAATGC TTATAGTCGGCGCTA TERM 3481 3164886 - 3164909 + G 73 -8.3 -3.4072 | opp_overlap 3164883 3164886 TACTAGTTGAAATAG GCATTTTAG ATGACC CTAAAATGC TTATAGTCGGCGCTA CD2727 3164309 - 3165097 + | hypothetical protein TERM 3482 3165463 - 3165485 + G 76 -9.2 -3.21064 | overlap 3165467 ACAGATGCTCTATTT CTAAGTGCTG CAA TAGCACTTGG TGTATTAGTTGTAAC CD2728 3165097 - 3165570 + | hypothetical protein CD2729 3166101 - 3165661 - | putative regulator of the sigma(E) factor CD2730 3166409 - 3166116 - | hypothetical protein TERM 3483 3166364 - 3166380 + g 71 -6.6 -4.03141 | TTTTTAATCTTTTTA TGAGAG CTTCC CTCTCA TTGTTTGGTGCTAAT CD2731 3166853 - 3166452 - | hypothetical protein TERM 3484 3169225 - 3169176 - g 75 -4.7 -5.06103 | gap 1, opp_overlap 3169202, overlap 3169178 3169182 AGAATTTCTAAAAAA TATAAATAGGTCTAATAAGTTAAA CAG TTAAACCTATTTAACCTATTTA-A TTACATTTTCATATA TERM 3485 3169224 - 3169178 - g 91 -9.8 -4.15235 | opp_overlap 3169202, overlap 3169176 3169182 AATTTCTAAAAAATA TAAATAGGTCTAATAAGTTAAA CAG TTAAACCTATTTAACCTATTTA ATTACATTTTCATAT CD2732 3167086 - 3169206 + | putative sigma-54-interacting regulatory protein TERM 3486 3169220 - 3169182 - f 74 -6.2 -4.64992 | opp_overlap 3169202, overlap 3169178 3169176 TCTAAAAAATATAAA TAGGTCTAATAAGTTAAA CAG TTAAACCTATTTAACCTA TTTAATTACATTTTC TERM 3487 3170121 - 3170108 - g 76 -3.9 -5.48303 | AGAATTTGAAAAAAA TACAA TTAC TTGTA TGGCTCCAACTAAAA CD2733 3169431 - 3170597 + | putative aminotransferase TERM 3488 3170866 - 3170916 + G 85 -11.3 -2.71268 | opp_overlap 3170881 3170883, overlap 3170863 ACTTAATTATACTTT CTGTTGGTGTACTAATAGCAGCT TGGAT AGCTGCTGGTACAATACCAACAG TAGTATATAGTGGAC TERM 3489 3171189 - 3171203 + G 79 -7.2 -4.36914 | opp_overlap 3171189 3171184 3171191 ACAGATGTAATTACA CATATG AAG CATATG TTTTATACCACAGGA mleN 3170622 - 3172064 + | putative malate-2H(+)/Na(+)-lactate antiporter TERM 3490 3172371 - 3172391 + T 100 -8.4 -5.95946 | opp_overlap 3172371 ATTTTTATAAAAAAA CTGCTTTA CAAAT TAAAGCAG TTTTTTTATTGTTAC TERM 3491 3172391 - 3172371 - T 100 -8.4 -5.61596 | opp_overlap 3172371 ATTTTTATAAAAAAA CTGCTTTA CAAAT TAAAGCAG TTTTTTTATTGTTAC CD2735 3173840 - 3172413 - | cell surface protein TERM 3492 3174347 - 3174335 - g 78 -6.3 -4.82901 | opp_overlap 3174334, overlap 3174320 TCTTCCTTAGAAAAA GAACT TGG AGTTC AGTTATTTGACAGAA TERM 3493 3174732 - 3174709 - g 83 -9 -4.1711 | opp_overlap 3174714, overlap 3174710 AGGAGTTTCAATAAA CCATCCTTTA TCAT TAAAGGATGA AGTATATCTAAGCGA TERM 3494 3174731 - 3174710 - g 81 -10.3 -3.09784 | opp_overlap 3174714, overlap 3174709 GGAGTTTCAATAAAC CATCCTTTA TCAT TAAAGGATG AAGTATATCTAAGCG CD2736 3174212 - 3175081 + | LysR family transcriptional regulator CD2737 3175999 - 3175193 - | putative carbon-nitrogen hydrolase CD2738 3177245 - 3176013 - | putative cytosine permease TERM 3495 3176242 - 3176225 - G 83 -9.9 -3.57918 | ACTCACACCACATAA TTCCTGC TATT GCAGGAA CTGCGATTCCCAAGA TERM 3496 3177642 - 3177672 + r 88 -8.5 -4.88222 | opp_overlap 3177642 ATTCTAATAAAAAAA GTCTGAATATAAA TATAC TTTATATCCAGAC TTTTTACATTTTAGT TERM 3497 3177672 - 3177642 - R 100 -10.7 -5.80364 | opp_overlap 3177642 ATTCTAATAAAAAAA GTCTGAATATAAA TATAC TTTATATCCAGAC TTTTTACATTTTAGT aspS 3179491 - 3177704 - | putative aspartyl-tRNA synthetase TERM 3498 3178355 - 3178369 + g 79 -7.2 -4.4261 | TATAGCGTTCATTTC TTCTTC ATT GAAGAA TTTTGCTATTGGAGA hisS 3180827 - 3179565 - | putative histidyl-tRNA synthetase TERM 3499 3180170 - 3180180 + g 70 -4 -4.92385 | CTGCAATAAATGGTA TATC TTT GATA TTTTCTTTACATGTA CD2741 3182376 - 3180817 - | coproporphyrinogen III oxidase TERM 3500 3181235 - 3181248 + g 91 -5.3 -5.74122 | opp_overlap 3181227 GTATGAACTGTAAGG CTTTC AGGA GAAAG TTTTTTTATCTCCTC TERM 3501 3181976 - 3181950 - G 100 -12.5 -3.32294 | overlap 3181940 TTAAATTGTGGACAA TTTTGACTGGT CTAAT ACCAGTCAAAA TTCCCCATGGTACAT CD2742 3183078 - 3182464 - | putative hydrolase dtd 3183542 - 3183093 - | putative D-tyrosyl-tRNA protein relA 3185774 - 3183567 - | putative GTP pyrophosphokinase TERM 3502 3185816 - 3185836 + r 77 -9.1 -3.31792 | opp_overlap 3185816 TAATATATATGAAAA TAGTTGGTG TTA TACCAACTA TTATAAAAGTACTAG TERM 3503 3185836 - 3185816 - R 82 -8.4 -4.4296 | opp_overlap 3185816 TAATATATATGAAAA TAGTTGGT GTTAT ACCAACTA TTATAAAAGTACTAG apt 3186360 - 3185848 - | adenine phosphoribosyltransferase TERM 3504 3186107 - 3186123 + g 76 -6.5 -4.5442 | TAACTCTCAACTTCA CCTGGTA ACT TTCCAGG TTTTCTAATTGGAAC recJ 3188823 - 3186373 - | putative single-stranded-DNA-specific exonuclease ubiB 3190500 - 3188836 - | ubiquinone biosynthesis protein TERM 3505 3190649 - 3190661 + r 79 -4.9 -5.61881 | TTTTATTAAAATTAT TTAAC TCA GTTAA TTTTTATTTTTGACA TERM 3506 3190795 - 3190739 - R 100 -10.6 -4.77719 | gap 1, opp_overlap 3190744 3190746, overlap 3190743 3190744 3190746 CAAAATCTAATAAAA TAAATTAGTGGTTGCCTCAAAACAGAT TTAA ATATGTTTTGAAACAACCACTC-TTTA AACTAATATTTTTGA TERM 3507 3190792 - 3190743 - R 95 -9.5 -4.88795 | opp_overlap 3190744 3190746, overlap 3190739 3190744 3190746 ATCTAATAAAATAAA TTAGTGGTTGCCTCAAAACAGAT TTAA ATATGTTTTGAAACAACCACTCT TTAAACTAATATTTT TERM 3508 3190791 - 3190744 - R 95 -13 -3.5165 | opp_overlap 3190744 3190746, overlap 3190743 3190739 3190746 TCTAATAAAATAAAT TAGTGGTTGCCTCAAAACAGAT TTAA ATATGTTTTGAAACAACCACTC TTTAAACTAATATTT TERM 3509 3190744 - 3190791 + r 75 -8.6 -3.64184 | opp_overlap 3190744 3190743 3190739 3190746, overlap 3190746 TCTAATAAAATAAAT TAGTGGTTGCCTCAAAACAGAT TTAA ATATGTTTTGAAACAACCACTC TTTAAACTAATATTT TERM 3510 3190746 - 3190789 + r 93 -11.2 -3.39286 | opp_overlap 3190744 3190743 3190739 3190746, overlap 3190744 TAATAAAATAAATTA GTGGTTGCCTCAAAACAGAT TTAA ATATGTTTTGAAACAACCAC TCTTTAAACTAATAT TERM 3511 3190789 - 3190746 - R 100 -15.6 -3.31288 | opp_overlap 3190746 3190744, overlap 3190744 3190743 3190739 TAATAAAATAAATTA GTGGTTGCCTCAAAACAGAT TTAA ATATGTTTTGAAACAACCAC TCTTTAAACTAATAT CD2748 3191295 - 3190798 - | putative transferase CD2749 3192703 - 3191324 - | putative radical SAM family protein TERM 3512 3192830 - 3192810 - R 95 -8.4 -5.1764 | opp_overlap 3192810 CATACAATACAAAAA TGACTTAC TCTCC GTAAGTCA TTTCATTAAATACAC TERM 3513 3192810 - 3192830 + r 78 -8.4 -3.93288 | opp_overlap 3192810 CATACAATACAAAAA TGACTTAC TCTCC GTAAGTCA TTTCATTAAATACAC agrD 3193154 - 3193008 - | autoinducer prepeptide agrB 3193762 - 3193184 - | accessory gene regulator CD2751 3195560 - 3194130 - | hypothetical protein TERM 3514 3195771 - 3195783 + H 70 -2.7 -5.51165 | ATTTATATTTATTAC TCATT TAT AGTGA TTTTTTTCAAATTTT CD2752 3195904 - 3196569 + | hypothetical protein TERM 3515 3196736 - 3196694 - T 75 -6.5 -4.55118 | gap 1 TAATTCTATATAAAA GAGAGTGCCTCATAAACTAA AAAG TTCATTT-TGAGACACCCTC CTATTTATAATAAAC CD2753 3199777 - 3197075 - | putative signaling protein TERM 3516 3197230 - 3197263 + g 72 -4.1 -5.05782 | opp_overlap 3197233 TGCCATTAATCTTAG CAATTTGAACTAT AGTTTTTA ATAATTCAAATTG TTTTTTAGAATAGGT TERM 3517 3199240 - 3199209 - G 70 -9 -2.67244 | opp_overlap 3199205 3199204, overlap 3199205 TCATACTCAAATCCA GATTCTTTTAATTT ATTT AAGTTAAAAGAATC TACAACTTTTTTGGC CD2754 3201353 - 3199803 - | putative signaling protein TERM 3518 3201584 - 3201608 + r 100 -11.7 -5.84381 | opp_overlap 3201584 TATATAACAAAAAAA CTATAGTATAT ATG ATATACTATAG TTTTTTTATTCGTAA TERM 3519 3201608 - 3201584 - R 100 -11.7 -5.9218 | opp_overlap 3201584 TATATAACAAAAAAA CTATAGTATAT ATG ATATACTATAG TTTTTTTATTCGTAA ptsI 3203388 - 3201676 - | phosphoenolpyruvate-protein phosphotransferase ptsH 3204002 - 3203742 - | PTS system, phosphocarrier protein TERM 3520 3204074 - 3204087 + r 70 -3.1 -5.34555 | TTTTTTACTTTAATG GTACT AAGT GGTAC TTTTTTGTCCTATGG TERM 3521 3204093 - 3204105 + r 73 -3.3 -5.45652 | TAAGTGGTACTTTTT TGTCC TAT GGTCA TTTTTTGTTCCCACT CD2757 3205406 - 3204195 - | putative phospholipase CD2758 3207371 - 3205638 - | putative DNA modification methylase TERM 3522 3206012 - 3206022 + g 82 -4 -5.63517 | opp_overlap 3206012 CATTTGATTTATAAG GATA CAT TATC TTTTTTCTTTCAAAG TERM 3523 3206819 - 3206831 + g 85 -4.9 -5.61913 | overlap 3206828 AAACTTCACTATATT TTTCT AGG AGAAA TTTTTTATATTTCTT CD2759 3207809 - 3207411 - | hypothetical protein CD2760 3209359 - 3207812 - | putative signaling protein TERM 3524 3208976 - 3208950 - G 72 -6.8 -4.07568 | opp_overlap 3208950 3208953, overlap 3208953 GCTTCTTTTCCAAAA TAATTTTTTAAG TTA CTTAAAATATTA TTTAACACTTCATCC TERM 3525 3209573 - 3209532 - R 87 -6.2 -5.75342 | opp_overlap 3209532 TTTTTGCAAAAAAAA CTATGAAATTAGATAT AGATAAAATA ATTTCTAATTTCATAG TTTCTAAATTCAAAC CD2761 3210579 - 3209674 - | putative N-acetylmuramoyl-L-alanine amidase uppS 3211266 - 3210622 - | undecaprenyl pyrophosphate synthetase TERM 3526 3211046 - 3211059 + g 70 -5.3 -4.54047 | overlap 3211034 GCAGCATCAATACAT GCTTT TGTA AAAGC TTTTGTCTGCACTGA CD2763 3211405 - 3211875 + | putative lipoprotein TERM 3527 3211901 - 3211952 + T 100 -10.9 -5.77856 | gap 2, opp_overlap 3211901, overlap 3211886 TTGATGTTTATTAAA TATCAATGTAATTTTCGCATAAATA AACT TATTTAT-C-AAAATTACATTGATA TTTTTTTGATTTCTT TERM 3528 3211952 - 3211901 - T 95 -10.9 -3.73775 | gap 2, opp_overlap 3211886 3211901 TTGATGTTTATTAAA TATCAATGTAATTTTCGCATAAATA AACT TATTTAT-C-AAAATTACATTGATA TTTTTTTGATTTCTT CD2764 3212786 - 3211998 - | putative hydrolase TERM 3529 3212808 - 3212820 + H 73 -3.5 -5.61689 | CCTCCCCCAAATTAT TAATT TAT AATTA TTTTTTATTAATTTT TERM 3530 3213568 - 3213558 - g 70 -5.4 -4.61199 | opp_overlap 3213558 ACTTGATATACAAAA CTAC GCC GTAG TTGACTTTTTCTCTT CD2765 3213154 - 3214110 + | putative penicillin-binding protein repressor TERM 3531 3214141 - 3214194 + F 100 -12.1 -4.1721 | opp_overlap 3214147, overlap 3214147 CCAATAATTTGATGA TAAATACATACCTCTTAAATGCAAA TTGC TTTGTATTTATGGGGTGTGTTTTTA TTTTAAAATATAAAT TERM 3532 3214147 - 3214188 + F 100 -11.1 -5.46706 | opp_overlap 3214147, overlap 3214141 ATTTGATGATAAATA CATACCTCTTAAATGCAAA TTGC TTTGTATTTATGGGGTGTG TTTTTATTTTAAAAT CD2766 3214395 - 3215360 + | putative penicillin-binding protein repressor CD2767 3217669 - 3215558 - | cell surface protein TERM 3533 3216090 - 3216109 + g 71 -5.8 -4.39287 | TATAGTTTTTCTACT GGATTAGT TTTT ACTAATTC TTTTGCTATCATTAA TERM 3534 3216165 - 3216184 + g 83 -8 -4.56358 | CCAACTCTATTTATT GATACATT TGAC AATGTATC TTTTATCTCACTCTC TERM 3535 3217851 - 3217825 - R 100 -10.3 -5.9873 | opp_overlap 3217825 TTATTATAAAAAAAA CAGCAAAGAAA TTTAT CTTCTTTGCTG TTTTTATAACGTTCA TERM 3536 3217825 - 3217851 + r 95 -9.6 -4.87786 | opp_overlap 3217825 TTATTATAAAAAAAA CAGCAAAGAA ATTTATC TTCTTTGCTG TTTTTATAACGTTCA CD2768 3218678 - 3217971 - | putative cell-wall hydrolase CD2769 3220790 - 3218877 - | capsular polysaccharide biosynthesis protein CD2770 3221965 - 3220874 - | putative capsular polysaccharide biosynthesis glycosyl transferase rkpK 3223266 - 3221971 - | putative UDP-glucose 6-dehydrogenase tuaG 3224044 - 3223292 - | putative teichuronic acid biosynthesis glycosyl transferase CD2773 3225000 - 3224092 - | putative beta-glycosyltransferase CD2774 3225771 - 3225022 - | putative teichuronic acid biosynthesis glycosyl transferase CD2775 3226990 - 3225800 - | putative minor teichoic acid biosynthesis protein CD2776 3227829 - 3226990 - | putative glycosyl transferase TERM 3537 3227440 - 3227409 - G 100 -12.4 -4.22652 | opp_overlap 3227399 3227406 3227409 3227417, overlap 3227402 3227410 TTATAGTATCCAAAA CGTTGGAACTTGTG ATAT CACAAGTTCCATCA TACATTTTCTTAAAT TERM 3538 3227409 - 3227440 + g 78 -10.2 -2.85242 | opp_overlap 3227402 3227409 3227410, overlap 3227399 3227406 3227417 TTATAGTATCCAAAA CGTTGGAACTTGTG ATAT CACAAGTTCCATCA TACATTTTCTTAAAT TERM 3539 3227439 - 3227410 - G 100 -13.7 -3.13109 | opp_overlap 3227399 3227409 3227406 3227417, overlap 3227402 3227409 TATAGTATCCAAAAC GTTGGAACTTGTG ATAT CACAAGTTCCATC ATACATTTTCTTAAA CD2777 3228989 - 3227832 - | putative polysaccharide polymerase TERM 3540 3228486 - 3228468 - G 72 -7.6 -3.66844 | opp_overlap 3228472 TTTATATCTTAAGAA TATATATG CTG CATATATA GTAACCATATGATAA CD2778 3229727 - 3229005 - | putative polysaccharide biosynthesis protein TERM 3541 3229303 - 3229316 + g 72 -5.3 -4.78107 | opp_overlap 3229303 ATTGTAAACAATGAA GAAGT AAGT ACTTC TTTTTCATAATACTC TERM 3542 3229701 - 3229711 + g 78 -4 -5.42259 | opp_overlap 3229701 TGGACCACCAAACCA TACA TAA TGTA TTTTTTTAGGAATCA manC 3230812 - 3229739 - | putative mannose-1-phosphate guanylyltransferase TERM 3543 3230412 - 3230425 + g 70 -5.3 -4.58395 | TTATCATTATTTTCT GCTAT ATAG ATAGC TTTTTCCAAAATAGA pgm2 3232540 - 3230834 - | putative phosphomannomutase/phosphoglycerate mutase mviN 3234142 - 3232586 - | putative transmembrane virulence factor MviN family protein TERM 3544 3233865 - 3233842 - G 72 -7.6 -3.63516 | opp_overlap 3233845 3233864, overlap 3233838 3233845 3233859 TAAATAAAAGACCAA TAATAGCTAT TACT ATAGCCATTA TATAGCATATATTTA CD2782 3235312 - 3234257 - | cell surface protein TERM 3545 3235031 - 3235049 + g 72 -4.6 -4.90136 | TTCTTTTAGATAATT TCTTGTTA CTC TACCAAGA TTTTTACTCTTAGTT TERM 3546 3235347 - 3235384 + r 85 -10.1 -3.25986 | opp_overlap 3235351 3235358, overlap 3235348 3235351 3235358 3235383 TTTTTGTATTTTTTG ACAATAAAAAAGCTCTT TTTA AAGAGCTTTTTCATTGA TTAGTAATCTAATAT TERM 3547 3235348 - 3235383 + r 91 -13.6 -2.5511 | opp_overlap 3235351 3235358, overlap 3235347 3235351 3235358 TTTTGTATTTTTTGA CAATAAAAAAGCTCTT TTTA AAGAGCTTTTTCATTG ATTAGTAATCTAATA TERM 3548 3235351 - 3235380 + r 82 -9.5 -3.42407 | opp_overlap 3235351 3235358, overlap 3235348 3235347 3235358 TGTATTTTTTGACAA TAAAAAAGCTCTT TTTA AAGAGCTTTTTCA TTGATTAGTAATCTA TERM 3549 3235380 - 3235351 - R 93 -11.7 -3.29511 | opp_overlap 3235351 3235348 3235347 3235358, overlap 3235358 TGTATTTTTTGACAA TAAAAAAGCTCTT TTTA AAGAGCTTTTTCA TTGATTAGTAATCTA TERM 3550 3235373 - 3235358 - R 100 -7.6 -5.55769 | opp_overlap 3235358 3235351 3235348 3235347, overlap 3235351 TTTGACAATAAAAAA GCTCTT TTTA AAGAGC TTTTTCATTGATTAG TERM 3551 3235358 - 3235373 + r 90 -7.6 -4.93547 | opp_overlap 3235351 3235358, overlap 3235351 3235348 3235347 TTTGACAATAAAAAA GCTCTT TTTA AAGAGC TTTTTCATTGATTAG CD2783 3236093 - 3235407 - | putative glycosyltransferase TERM 3552 3236245 - 3236290 + r 100 -13.7 -4.61284 | opp_overlap 3236208 3236245 3236247, overlap 3236247 GATTCTTTACAAAAA TATATCATCTCTTGTTATATT TTAC ATTATAACAGGAGATGATATG TTTTGCTTTAATATT TERM 3553 3236290 - 3236245 - R 95 -9.3 -4.83615 | opp_overlap 3236245 3236247, overlap 3236208 3236247 GATTCTTTACAAAAA TATATCATCTCTTGTTATATT TTAC ATTATAACAGGAGATGATATG TTTTGCTTTAATATT TERM 3554 3236288 - 3236247 - R 100 -11.9 -4.03995 | opp_overlap 3236247 3236245, overlap 3236208 3236245 TTCTTTACAAAAATA TATCATCTCTTGTTATATT TTAC ATTATAACAGGAGATGATA TGTTTTGCTTTAATA TERM 3555 3236247 - 3236288 + r 100 -14.1 -3.90002 | opp_overlap 3236208 3236245 3236247, overlap 3236245 TTCTTTACAAAAATA TATCATCTCTTGTTATATT TTAC ATTATAACAGGAGATGATA TGTTTTGCTTTAATA CD2784 3238340 - 3236313 - | cell surface protein TERM 3556 3238471 - 3238459 - R 77 -4.9 -5.34555 | opp_overlap 3238459 3238452 TTATAGCACAAAAAA TTACA AAT TGTAA ACTTTTTGTAATCTT CD2785 3239703 - 3238591 - | hypothetical protein TERM 3557 3238850 - 3238862 + g 77 -4.9 -5.32396 | AGTGCTATTATTGGG GTAAA TAT TTTAC TTTTATTTTTGATGT TERM 3558 3239650 - 3239669 + g 100 -12.2 -3.9679 | opp_overlap 3239646 ATTGCAGACTATCAT GAGGGCTA TTGA TAGCCCTC TTATTATATCTATTG CD2786 3241621 - 3240044 - | cell surface protein cwp84 3244329 - 3241918 - | cell surface protein (putative cell surface-associated cysteine protease) CD2788 3244556 - 3244957 + | putative cell wall teichoic acid glycosylation protein TERM 3559 3244948 - 3244983 + T 79 -7.1 -4.61527 | opp_overlap 3244954, overlap 3244953 3244954 GATAATTTTTAAAAA TAAAAAGTAGACAAT CAAAAA ATTGTCTACCTTTTG TTTTTAAAAGATTTT TERM 3560 3244953 - 3244978 + T 74 -4.8 -5.26119 | opp_overlap 3244954, overlap 3244948 3244954 TTTTTAAAAATAAAA AGTAGACAAT CAAAAA ATTGTCTACC TTTTGTTTTTAAAAG TERM 3561 3244954 - 3244977 + T 76 -8.3 -3.74587 | opp_overlap 3244954, overlap 3244953 3244948 TTTTAAAAATAAAAA GTAGACAAT CAAAAA ATTGTCTAC CTTTTGTTTTTAAAA TERM 3562 3244977 - 3244954 - T 100 -9 -5.61881 | opp_overlap 3244953 3244948 3244954 TTTTAAAAATAAAAA GTAGACAATC AAAA AATTGTCTAC CTTTTGTTTTTAAAA TERM 3563 3245011 - 3244993 - T 77 -7.6 -4.07568 | opp_overlap 3244987 CTTTTGTTTTTAAAA GATTTTAA TAT TTAAAATC CATCATCTGTAGCGT cwp66 3246836 - 3245004 - | cell surface protein TERM 3564 3245126 - 3245140 + g 70 -8.6 -2.60257 | GAAATGGCTCTTCAT CTGTTG GTG CAACAG TCCATTCTCCAATAT CD2790 3247576 - 3246869 - | hypothetical protein CD2791 3249554 - 3247683 - | cell surface protein (putative S-layer protein precursor) TERM 3565 3248952 - 3248970 + g 100 -11.8 -3.93782 | AGGGTCTAAATTTGT TCCAGTTG AAT CAACTGGA TTTGCTGTTAAATCA TERM 3566 3249156 - 3249177 + g 100 -9.5 -4.60746 | TGTTATAGAGTTAGC TTCAGCGGA AAGG TCTGCTGAA TTTTCATATTTTTCA TERM 3567 3249845 - 3249884 + r 100 -13.2 -3.314 | gap 1, opp_overlap 3249855, overlap 3249855 TTTCCGTATTTCTCA CACA-GAAAAAGAAGCTGA TTT TCAGCTTCTTTTTCATTTG TATTCCTTAATTATT TERM 3568 3249873 - 3249855 - R 100 -11.8 -5.03994 | opp_overlap 3249845 3249855 TCTCACACAGAAAAA GAAGCTGA TTT TCAGCTTC TTTTTCATTTGTATT TERM 3569 3249855 - 3249873 + r 100 -11.8 -5.08367 | opp_overlap 3249855, overlap 3249845 TCTCACACAGAAAAA GAAGCTGA TTT TCAGCTTC TTTTTCATTTGTATT secA2 3252314 - 3249969 - | preprotein translocase SecA subunit TERM 3570 3252450 - 3252481 + r 100 -16.2 -4.95487 | opp_overlap 3252455, overlap 3252455 TAGGGATTTCTCACA TAAAATAGAGGCTA TTTA TAGCCTCTATTTTA TTTTATATTTATTTT TERM 3571 3252476 - 3252455 - R 100 -11.7 -4.52857 | opp_overlap 3252450 3252455 ATTTCTCACATAAAA TAGAGGCTA TTTA TAGCCTCTA TTTTATTTTATATTT TERM 3572 3252455 - 3252476 + r 100 -11.7 -5.2894 | opp_overlap 3252455, overlap 3252450 ATTTCTCACATAAAA TAGAGGCTA TTTA TAGCCTCTA TTTTATTTTATATTT TERM 3573 3252493 - 3252541 + r 100 -10.8 -4.65747 | gap 1, opp_overlap 3252500 3252507, overlap 3252494 3252507 TTTATTTTATATTTA TTTTAAATA-AAAAAGACTTCTC ATGA GAGAAGCCTTTTTCTATTTAAAG TTTTATTAAAACTTA TERM 3574 3252494 - 3252540 + r 95 -12.1 -3.38725 | gap 1, opp_overlap 3252500 3252507, overlap 3252493 3252507 TTATTTTATATTTAT TTTAAATA-AAAAAGACTTCTC ATGA GAGAAGCCTTTTTCTATTTAAA GTTTTATTAAAACTT TERM 3575 3252534 - 3252500 - R 79 -8.9 -3.61654 | gap 1, opp_overlap 3252494 3252493 3252507, overlap 3252507 TATATTTATTTTAAA TA-AAAAAGACTTCTC ATGA GAGAAGCCTTTTTCTA TTTAAAGTTTTATTA TERM 3576 3252507 - 3252526 + r 83 -6.4 -5.19879 | opp_overlap 3252500 3252507, overlap 3252494 3252493 ATTTTAAATAAAAAA GACTTCTC ATGA GAGAAGCC TTTTTCTATTTAAAG TERM 3577 3252526 - 3252507 - R 100 -8.6 -5.64421 | opp_overlap 3252507 3252494 3252493, overlap 3252500 ATTTTAAATAAAAAA GACTTCTC ATGA GAGAAGCC TTTTTCTATTTAAAG slpA 3254718 - 3252559 - | cell surface protein (S-layer precursor protein) TERM 3578 3254224 - 3254236 + g 78 -6.3 -4.75174 | AACTTTAAGTGCCTT TGTTG CAG CAACA TTTTTACCTTCACTA CD2794 3256515 - 3254929 - | surface surface protein CD2795 3258335 - 3256734 - | cell surface protein TERM 3579 3257911 - 3257923 + g 74 -6.3 -4.51891 | overlap 3257899 3257908 GTTGCTATTTCTTTA GCTAT TAA ATAGC TTGTTTTTAGTCTAT TERM 3580 3258687 - 3258632 - R 100 -12.5 -4.56314 | opp_overlap 3258632 3258637, overlap 3258637 TTAAGATAATGAAAA TAAAATAAGAATGCATTTAAATATA TAACTT TATATCTAAATACATTCTTATTTTC TATTTACTTAATATT TERM 3581 3258632 - 3258687 + r 75 -8.1 -3.58518 | opp_overlap 3258632 3258637, overlap 3258637 TTAAGATAATGAAAA TAAAATAAGAATGCATTTAAATATA TAACTT TATATCTAAATACATTCTTATTTTC TATTTACTTAATATT TERM 3582 3258637 - 3258682 + r 86 -8 -4.84539 | opp_overlap 3258632 3258637, overlap 3258632 ATAATGAAAATAAAA TAAGAATGCATTTAAATATA TAACTT TATATCTAAATACATTCTTA TTTTCTATTTACTTA TERM 3583 3258682 - 3258637 - R 100 -12.4 -5.19998 | opp_overlap 3258637 3258632, overlap 3258632 ATAATGAAAATAAAA TAAGAATGCATTTAAATATA TAACTT TATATCTAAATACATTCTTA TTTTCTATTTACTTA CD2796 3260588 - 3258702 - | cell surface protein TERM 3584 3260556 - 3260567 + g 71 -3 -5.28831 | overlap 3260561 TGATACTGCTATAGT TCTT ATAA AAGA TTTTCTTTTATTCAT TERM 3585 3260638 - 3260609 - R 90 -10.9 -3.22298 | opp_overlap 3260609 3260608, overlap 3260613 CTTATCTATCATTAA CTAAGTGGATAAA TTTA CTTATCCACCTAG CTTTTATATTTAATT TERM 3586 3260609 - 3260638 + r 72 -8 -3.49096 | opp_overlap 3260609 3260613, overlap 3260608 CTTATCTATCATTAA CTAAGTGGATAA ATTTAC TTATCCACCTAG CTTTTATATTTAATT TERM 3587 3260634 - 3260613 - R 74 -8.1 -3.41693 | opp_overlap 3260609 3260608, overlap 3260609 TCTATCATTAACTAA GTGGATAAA TTTA CTTATCCAC CTAGCTTTTATATTT CD2797 3266755 - 3260792 - | hypothetical protein TERM 3588 3263281 - 3263301 + g 73 -3.9 -5.29782 | TATCACTTTCAATAT CTGTAGTGT TTA ACACACCAG TTTTTTCTGAATATC TERM 3589 3266848 - 3266832 - R 76 -2.9 -5.9218 | CAGACAATAAAAAAA GACACTC AAA GAGAATC TTAATTATAAAATAA TERM 3590 3267072 - 3267039 - R 100 -10.7 -5.75599 | opp_overlap 3267039 3267042 TAAATTATAAAAAAA TAACATTTATATTAA TTTA TTAATATAAATGCTA TTTTCCATTATAATT TERM 3591 3267039 - 3267072 + r 80 -8.5 -4.33754 | opp_overlap 3267039, overlap 3267042 TAAATTATAAAAAAA TAACATTTATATTAA TTTA TTAATATAAATGCTA TTTTCCATTATAATT TERM 3592 3267042 - 3267069 + r 80 -10.2 -2.84977 | opp_overlap 3267039, overlap 3267039 ATTATAAAAAAATAA CATTTATATTAA TTTA TTAATATAAATG CTATTTTCCATTATA CD2798 3268569 - 3267136 - | cell surface protein TERM 3593 3268769 - 3268797 + r 71 -5.5 -4.64766 | opp_overlap 3268772, overlap 3268772 TAGTAATATGTTTAA TCATTATAAGAAG TAT CTTTTTATAATAA TTTTTGCAATATGAA TERM 3594 3268883 - 3268837 - R 100 -7.7 -5.33848 | gap 1, opp_overlap 3268842, overlap 3268842 ATTATAATCAAAAAA TAAAATAAGGTATCTCAATCTA ATTC TAAAT-GAGACACCTTATTTTT ATTATTTTATCTTGT TERM 3595 3268842 - 3268878 + r 73 -3.2 -5.47964 | gap 1, opp_overlap 3268837 3268842 AATCAAAAAATAAAA TAAGGTATCTCAATCTA ATTC TA-AATGAGACACCTTA TTTTTATTATTTTAT TERM 3596 3268878 - 3268842 - R 100 -7.6 -5.47846 | gap 1, opp_overlap 3268842, overlap 3268837 AATCAAAAAATAAAA TAAGGTATCTCAATCTA ATTC TAAAT-GAGACACCTTA TTTTTATTATTTTAT CD2799 3270896 - 3269001 - | cell surface protein TERM 3597 3270061 - 3270071 + g 72 -4 -5.06735 | opp_overlap 3270061 TTGCTTAAAACTATA TCAA AGC TTGA TTTTTCTGGTTTATC TERM 3598 3270773 - 3270783 + g 70 -4 -4.86033 | CAGAATCTTTCGCAC TTAC TGT GTAA TTTTTATCAACATTT TERM 3599 3270955 - 3270974 + r 70 -5.2 -4.75356 | opp_overlap 3270955 3270958 TTTCCCACACATAAA TAATATTA TATA TAATATTA TTTTTCAATATATTT TERM 3600 3271493 - 3271450 - R 100 -10.5 -5.13343 | TAATTGAAAATAAAA GAGGATACCTCATAATGAT AAAAGA ATCACTTTGAGATACCCTC TTACAAACAACTAAA CD2800 3272109 - 3271729 - | hypothetical protein TERM 3601 3271863 - 3271851 - G 85 -4.9 -5.51402 | ACACAGTCAAAAAAA TACAT ACT ATGTA CAAAAGTCCTACTAA TERM 3602 3272132 - 3272099 - G 88 -5.5 -5.60993 | gap 1 TTTCCCATAAAAAAA CCTCCTCTCAAAT-TA ATA TATATTCGAGAAAAGG CTTTTAAATTACTAA CD2801 3272442 - 3272149 - | putative protein translocase subunit tgt 3273715 - 3272576 - | queuine tRNA-ribosyltransferase TERM 3603 3273199 - 3273212 + g 70 -3.9 -5.17054 | TTAACCATCTTGTTG TTCTT TCTA AAGAA TTTTTTACATATTCT CD2803 3274261 - 3273776 - | hypothetical protein TERM 3604 3274046 - 3274062 + g 71 -6.7 -3.96327 | TACAAGTTCAACACC TATTACT AAA AGTAATA TTTGTGCTAAAAAAT queA 3275298 - 3274273 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 3605 3274890 - 3274905 + g 76 -6.2 -4.61747 | opp_overlap 3274890, overlap 3274885 ATATTTCTTCAAAAA TTCCAT CATA ATGGAA TTTTATAATTCTTGA TERM 3606 3274905 - 3274890 - G 76 -6.2 -4.57837 | opp_overlap 3274885 3274890 ATATTTCTTCAAAAA TTCCAT CATA ATGGAA TTTTATAATTCTTGA ruvB 3276635 - 3275616 - | Holliday junction DNA helicase B ruvA 3277353 - 3276742 - | holliday junction DNA helicase ruvC 3277846 - 3277337 - | crossover junction endodeoxyribonuclease RuvC TERM 3607 3277893 - 3277874 - R 74 -5.1 -5.26119 | CCCCTAAAAATAAAA GAAATAC CAAAAT GTATTTC TCATAAAAACTTATG TERM 3608 3278029 - 3277974 - R 79 -8.8 -3.52656 | opp_overlap 3278013 3278026, overlap 3277978 3277985 TGTAAAATATAAAAT CAAATAAAAAAGTTATATCAAAGCAA GATT TTACCTCAATATAACTTTTATATTTA TTACAAATAAATTAT TERM 3609 3278025 - 3277978 - R 75 -7.4 -4.33927 | opp_overlap 3278013, overlap 3277974 3277985 AAATATAAAATCAAA TAAAAAAGTTATATCAAAGCAA GATT TTACCTCAATATAACTTTTATA TTTATTACAAATAAA TERM 3610 3278018 - 3277985 - R 86 -5.5 -5.74086 | opp_overlap 3278013, overlap 3277978 3277974 AAATCAAATAAAAAA GTTATATCAAAGCAA GATT TTACCTCAATATAAC TTTTATATTTATTAC CD2808 3278787 - 3278158 - | hypothetical protein CD2809 3278990 - 3279313 + | hypothetical protein CD2810 3279575 - 3280435 + | hypothetical protein TERM 3611 3280525 - 3280480 - T 95 -12.3 -3.72396 | opp_overlap 3280482, overlap 3280482 3280486 AATACTAATACATAA GATTAAGGTTTAGAATATTTT TTGT AAAATACTCTAAACCCTAATT AATATACTATTATTT TERM 3612 3280482 - 3280523 + T 90 -10.5 -3.33129 | opp_overlap 3280480 3280482 3280486 TACTAATACATAAGA TTAAGGTTTAGAATATTTT TTGT AAAATACTCTAAACCCTAA TTAATATACTATTAT TERM 3613 3280523 - 3280482 - T 100 -14.9 -3.43033 | opp_overlap 3280482, overlap 3280480 3280486 TACTAATACATAAGA TTAAGGTTTAGAATATTTT TTGT AAAATACTCTAAACCCTAA TTAATATACTATTAT TERM 3614 3280519 - 3280486 - T 100 -13.5 -3.46116 | opp_overlap 3280482, overlap 3280482 3280480 AATACATAAGATTAA GGTTTAGAATATTTT TTGT AAAATACTCTAAACC CTAATTAATATACTA CD2811 3282057 - 3280621 - | hypothetical protein CD2812 3283489 - 3282128 - | putative gluconate permease garR 3284536 - 3283646 - | tartronate semialdehyde reductase CD2814 3284923 - 3285618 + | GntR family transcriptional regulator CD2815 3285793 - 3286269 + | hypothetical protein CD2816 3286531 - 3286839 + | hypothetical protein TERM 3615 3286938 - 3286898 - T 73 -6.5 -4.19735 | gap 1, opp_overlap 3286898 GGTCTTAAAATCAAA GAGTATCAGTAAATCTAT AAAAAA ACA-ACTTACTGATACTC TTTTTAATTATATGA CD2817 3288791 - 3287001 - | ABC transporter, ATP-binding/permease protein CD2818 3290557 - 3288791 - | ABC transporter, ATP-binding/permease protein TERM 3616 3290629 - 3290600 - H 100 -11.6 -5.63504 | opp_overlap 3290608 AATTTTATAAAAAAA GGAGAAAAGAGT TAACGC ACTCTCTTCTCC AGCATATTCTTTTTA CD2819 3291318 - 3292430 + | putative amino acid racemase TERM 3617 3292656 - 3292666 + T 86 -5.4 -5.65513 | opp_overlap 3292626, overlap 3292626 TAAAAAGTTCACTTT GAGA TAC TCTC TTTTTTTAATTAATA CD2820 3293300 - 3292794 - | hypothetical protein CD2821 3293973 - 3293302 - | hypothetical protein CD2822 3295135 - 3293963 - | putative peptidase CD2823 3295403 - 3296779 + | hypothetical protein TERM 3618 3296992 - 3296961 - T 100 -9.6 -5.06472 | opp_overlap 3296960 3296961 ATACAAATAATAAAA TAGCCACTACAA TCCATAAT TTGCAGTGGCTA CTTTTTACACTATCA CD2824 3297364 - 3297029 - | hypothetical protein TERM 3619 3297161 - 3297143 - G 78 -3.2 -5.64421 | ATTGTAAATAAAAAA TATAGAGA ATA TTTCTATA GACAACGCTACAAAA TERM 3620 3297640 - 3297662 + r 93 -7.8 -5.18357 | opp_overlap 3297640, overlap 3297643 GATTTCATAAAAAAA GCATAGCAAA TTA TTTGCTATAC TTTTTTACTAAATTA TERM 3621 3297662 - 3297640 - R 100 -10 -5.626 | opp_overlap 3297640 3297643 GATTTCATAAAAAAA GCATAGCAAA TTA TTTGCTATAC TTTTTTACTAAATTA TERM 3622 3297643 - 3297659 + r 74 -8.1 -3.41701 | opp_overlap 3297640, overlap 3297640 TTCATAAAAAAAGCA TAGCAAA TTA TTTGCTA TACTTTTTTACTAAA CD2825 3298245 - 3297715 - | putative flavodoxin CD2826 3299415 - 3298321 - | oxidoreductase TERM 3623 3298598 - 3298618 + g 74 -7.7 -3.84915 | TATAAAAAACAGCCT TCATCTTTA AAG TAAGGATGA TTATTGGTTGGTATA CD2827 3299863 - 3299417 - | MarR family regulatory protein TERM 3624 3301218 - 3301201 - g 81 -4.9 -5.36965 | GAAGATGATAAAAAA TTCTGCA ATGA TGCAAAA CAATTTAATTTATTA CD2828 3300160 - 3301359 + | aspartate aminotransferase TERM 3625 3301380 - 3301433 + F 100 -12.2 -4.60143 | opp_overlap 3301383 3301387, overlap 3301387 TAAAAGTAATTCAAA TAATTAACTACCTTAGTATAGAAT ACTTAC ATTCTATATTAAGGTAGTTTATAA TTTTATGTACTATAT TERM 3626 3301430 - 3301383 - f 100 -12.4 -4.02653 | opp_overlap 3301380 3301387, overlap 3301387 AAGTAATTCAAATAA TTAACTACCTTAGTATAGAATA CTTA CATTCTATATTAAGGTAGTTTA TAATTTTATGTACTA TERM 3627 3301426 - 3301387 - f 100 -13.2 -3.63326 | opp_overlap 3301380 3301387, overlap 3301383 AATTCAAATAATTAA CTACCTTAGTATAGAATA CTTA CATTCTATATTAAGGTAG TTTATAATTTTATGT TERM 3628 3301387 - 3301426 + F 100 -14.7 -4.24984 | opp_overlap 3301387 3301383, overlap 3301380 AATTCAAATAATTAA CTACCTTAGTATAGAAT ACTTAC ATTCTATATTAAGGTAG TTTATAATTTTATGT CD2829 3301529 - 3302491 + | hypothetical protein TERM 3629 3302579 - 3302556 - T 100 -10.4 -4.71234 | opp_overlap 3302556 AAACGCAATATAAAA GAGATGCCAT TATA ATAGCATCTC TTTATTTATATTTAT TERM 3630 3302556 - 3302579 + T 88 -8.2 -4.74787 | opp_overlap 3302556 AAACGCAATATAAAA GAGATGCCAT TATA ATAGCATCTC TTTATTTATATTTAT CD2830 3303275 - 3302613 - | hypothetical protein TERM 3631 3303343 - 3303328 - R 79 -4 -5.79595 | opp_overlap 3303328 3303333, overlap 3303333 3303342 TTTCAAAATAAAAAA GATACC CAAG AGTATC TTTGTATATACAAAA TERM 3632 3303430 - 3303443 + r 73 -6.7 -4.26079 | TATAGCTTTGCGTGA CTAGG TTTC CCTAG TTTTGCCTCATTTAA TERM 3633 3303607 - 3303562 - R 79 -2.4 -6.07627 | gap 2, opp_overlap 3303562 3303572 ATCTTCAAAAAAAAA TATCTTCT--AACAATATTT TCATTATT AAATATTGTTTTAGAAGATA TTTTTTAATATAACT CD2831 3306564 - 3303646 - | putative collagen-binding protein TERM 3634 3306097 - 3306107 + g 78 -3.2 -5.53079 | TTCTAATAGATTATC TTCC TCT GGAG TTTTTTCTGTATTTT TERM 3635 3306693 - 3306662 - R 100 -10.4 -5.75478 | AATTATACAAAAAAA GCTATGAAAATAAA TAAA TTTATATTCATAGC CGGTTGCACCACTGA CD2832 3308072 - 3306894 - | putative cation efflux protein TERM 3636 3307463 - 3307448 - G 70 -6.2 -4.04811 | AGAAACCAGCATAAA GTATCA CTAA TGATAC TACGATACCAACATA TERM 3637 3308655 - 3308685 + r 73 -7.7 -3.74747 | gap 1, opp_overlap 3308655 TTAAACAAACAAAAA CCGCAAAGTTACAA TATA TAGTA-CTTTGCGG TTTCATAAGAATTAA TERM 3638 3308685 - 3308655 - R 100 -7.7 -5.5454 | gap 1, opp_overlap 3308655 TTAAACAAACAAAAA CCGCAAAGTTACAA TATA TAGTA-CTTTGCGG TTTCATAAGAATTAA CD2833 3311471 - 3308697 - | putative transport-related ATPase TERM 3639 3310005 - 3310017 + g 81 -4.9 -5.39221 | overlap 3310009 TTCTACTTTTGGAGT TATTG GAA CAATA TTTTTTCCTTGTTGT TERM 3640 3311402 - 3311422 + g 78 -6.2 -4.80396 | opp_overlap 3311406, overlap 3311406 CTACCTCATTATCAT CAAGTCCA ATTTC TGGATTTG TTTTTAAGTATTTTA TERM 3641 3311573 - 3311548 - R 100 -13.5 -5.75945 | opp_overlap 3311551, overlap 3311567 ACTTTTCAAAAAAAA TAAGGTGTTGA TTAA TCAACACCTTA TAGTGGTTATATATT TERM 3642 3311551 - 3311570 + r 91 -10.8 -3.49086 | opp_overlap 3311548 3311567 TTTCAAAAAAAATAA GGTGTTGA TTAA TCAACACC TTATAGTGGTTATAT glyA 3312899 - 3311643 - | serine hydroxymethyltransferase abgT 3314473 - 3312971 - | putative aminobenzoyl-glutamate transport protein CD2836 3315754 - 3314564 - | putative peptidase CD2837 3317063 - 3315993 - | hypothetical protein CD2838 3318064 - 3317366 - | putative two-component response regulator TERM 3643 3317685 - 3317709 + g 73 -3.8 -5.24531 | gap 1, opp_overlap 3317685 TCATTTAATAAATCA TTATTGGTATA TTGA TAT-CCAATAA TTTTTTCTACAGACT CD2839 3319683 - 3318178 - | putative two-component sensor histidine kinase TERM 3644 3320101 - 3320119 + r 73 -9 -2.84961 | overlap 3320098 3320112 TAACTATTTTTTTAT TACTTCTA TAT TAGAAGTA TCACTTTTATATTAA serS2 3321461 - 3320190 - | seryl-tRNA synthetase TERM 3645 3321335 - 3321349 + g 71 -7.2 -3.82218 | opp_overlap 3321323, overlap 3321322 3321330 TAACTTCAACTTCTT GAAGAA TCT TTCTTC TTTCATCATCTAACT TERM 3646 3321537 - 3321548 + r 76 -4.4 -5.38054 | overlap 3321543 ATACTTTATGCTTGA GGTT AAGA AACC TTTTTCTTTATCCGA CD2841 3323881 - 3322277 - | putative amidohydrolase CD2842 3324267 - 3325193 + | nitrilase (carbon-nitrogen hydrolase) TERM 3647 3325248 - 3325238 - T 86 -5.4 -5.71712 | overlap 3325239 TTTTACATAAAAAAA TGAG ATA CTCA TAAGTAAATTTCAAG CD2843 3326311 - 3325313 - | putative zinc-binding dehydrogenase TERM 3648 3326609 - 3326621 + G 71 -7.7 -3.40639 | opp_overlap 3326609 3326608 AGGAAAAGATAAATC CACTG TTA CAGTG TTGGTTAATAAACTT CD2844 3326415 - 3326852 + | MarR family transcriptional regulator rbr 3326938 - 3327525 + | rubrerythrin CD2846 3328445 - 3327825 - | hypothetical protein CD2847 3329220 - 3328453 - | hypothetical protein TERM 3649 3328660 - 3328688 + g 72 -4 -5.1485 | gap 1, overlap 3328664 ATTAATGATTTTGAT TAGTGAAAAAGCA TCTT TGCTTCTTC-CTA TTTTTATATTAGTTG CD2848 3330082 - 3329261 - | hypothetical protein TERM 3650 3329504 - 3329543 + g 78 -3 -5.626 | opp_overlap 3329505 3329514, overlap 3329505 3329507 TGATAATAGACCTAA ACTTATCAAATTTGAAGA CACT TTTTCAAAGTTGATATGC TTTTTTTCTAGCATA TERM 3651 3329507 - 3329540 + g 72 -7.7 -3.56036 | opp_overlap 3329505 3329514, overlap 3329505 3329504 TAATAGACCTAAACT TATCAAATTTGAAGA CACT TTTTCAAAGTTGATA TGCTTTTTTTCTAGC CD2849 3332351 - 3330441 - | bifunctional protein CD2850 3333415 - 3332630 - | DeoR family transcriptional regulator TERM 3652 3332931 - 3332943 + g 77 -7.7 -4.0828 | GCATCTATTGATATT GGACA TGC TGTCC TTTGGTGTTTTAAAT TERM 3653 3333162 - 3333173 + g 70 -4.4 -5.00642 | TTAGCTGCATATTTA GCAA TACT TTGC TTTTTATCTAGGTTA TERM 3654 3333582 - 3333555 - R 93 -7.8 -5.19212 | opp_overlap 3333555 ATTATCATTAAAAAA GTCCATCAAATA TTAG TATCAGATGGAC TTTGTAAAATTTTAT TERM 3655 3333637 - 3333652 + r 70 -6.2 -4.32651 | AACTACTAATTTATT TTCTTG TCTC CAAGAA TTTTACTAAATTATT dltC 3333862 - 3333632 - | D-alanine--poly(phosphoribitol) ligase subunit 2 (D-alanyl carrier protein) dltB 3335029 - 3333881 - | D-alanyl transferase dltA 3336543 - 3335029 - | D-alanine--poly(phosphoribitol) ligase subunit 1 (D-alanine-activating enzyme) dltD 3337854 - 3336664 - | putative D-alanine transferase TERM 3656 3337109 - 3337124 + g 100 -7.6 -5.74684 | opp_overlap 3337111 TTCTTTCTCTCATAT GACCAA TTTA TTGGTC TTTTTCTTTTTGTTG CD2855 3339161 - 3338142 - | putative oxidoreductase TERM 3657 3339298 - 3339256 - R 93 -7.2 -5.68438 | opp_overlap 3339256 TTATCAAATAAAAAA GAAAGCTAATTTTAAATGAT TTC ACCATTTTAACATAGCTTTC TTTTAACTACAATCT CD2856 3339876 - 3339337 - | hypothetical protein CD2857 3340657 - 3339977 - | putative hydrolase CD2858 3341975 - 3340686 - | putative transporter TERM 3658 3342168 - 3342117 - R 73 -7.1 -4.13995 | gap 1, opp_overlap 3342117 3342121, overlap 3342120 TTTTTATAAACTAAA TAACCCCTTTTAATATTTATGA CTGGCTATT TGATAAATATT-AAAGGGGTTA TTTAGTTATCATTTT TERM 3659 3342117 - 3342168 + r 73 -7.1 -4.06805 | gap 1, opp_overlap 3342117 3342120, overlap 3342121 TTTTTATAAACTAAA TAACCCCTTTTAATATTTATGA CTGGCTATT TGATAAATATT-AAAGGGGTTA TTTAGTTATCATTTT TERM 3660 3342121 - 3342165 + r 71 -6.8 -4.12899 | opp_overlap 3342120 3342117, overlap 3342117 TATAAACTAAATAAC CCCTTTTAATATTTATGA CTGGCTATT TGATAAATATTAAAGGGG TTATTTAGTTATCAT TERM 3661 3342375 - 3342326 - R 71 -6.7 -4.07455 | opp_overlap 3342326, overlap 3342322 3342332 TATTAATACTATAAA TAAAAACGAAGCATGATTTTTAT TTAA ATAAATCTCAAACTTCGTCTTTA CTTACTTAGATATTT TERM 3662 3342369 - 3342332 - R 70 -3.5 -5.40464 | opp_overlap 3342326, overlap 3342326 3342322 TACTATAAATAAAAA CGAAGCATGATTTTTAT TTAA ATAAATCTCAAACTTCG TCTTTACTTACTTAG CD2859 3344025 - 3342424 - | putative D-aminoacylase CD2860 3344813 - 3344136 - | hypothetical protein CD2861 3345525 - 3344830 - | hypothetical protein CD2862 3346791 - 3345577 - | putative dipeptidase TERM 3663 3346883 - 3346909 + r 74 -6 -4.64676 | opp_overlap 3346883 TGCAAAAAATAAAAA CAGTAGTAAG GTTGATA TTTACTACTG TTTTATTAAAAATAA TERM 3664 3346909 - 3346883 - R 86 -5.3 -5.75538 | opp_overlap 3346883 TGCAAAAAATAAAAA CAGTAGTAA GGTTGATAT TTACTACTG TTTTATTAAAAATAA TERM 3665 3346957 - 3346977 + r 70 -4.1 -5.22481 | TTCAATATTTTTGAA TTATCTTAA TCT TAAAGATAA TTTTATTTATTTCTA CD2863 3349082 - 3347037 - | putative sigma-54-dependent transcriptional regulator TERM 3666 3348009 - 3348037 + g 72 -4 -5.09204 | gap 1, opp_overlap 3348015 3348017, overlap 3348012 TCCATTTTCTCCAAG TATCAAC-ACAGA AAAG TCTGTAGTTGCTA TTTTTCTTGCAATAT TERM 3667 3348943 - 3348929 - G 71 -8.6 -2.7535 | opp_overlap 3348941, overlap 3348926 TGTCTGAACATACCA CAAGCT CAT AGCTTG ACAGTTCAATATTTA TERM 3668 3349295 - 3349285 - R 70 -2.6 -5.4659 | opp_overlap 3349285 GAATATAAACAAAAA TTTA ATA TAAA TTCGTTAATATATTA TERM 3669 3349406 - 3349369 - R 100 -13.7 -3.97645 | opp_overlap 3349369 AGGAATATATAATAA TAGGGTCTCAGAACTTA GTTA CAAGTTCTAAAACCCTA TTTGTTTAGTGTAAA TERM 3670 3349369 - 3349406 + r 82 -8.6 -4.53602 | opp_overlap 3349369 AGGAATATATAATAA TAGGGTCTCAGAACTT AGTTAC AAGTTCTAAAACCCTA TTTGTTTAGTGTAAA CD2864 3350302 - 3349493 - | putative esterase/halogenase TERM 3671 3350104 - 3350118 + g 70 -8.6 -2.71924 | overlap 3350103 TATAAGTATATCCTC CTGATG TTG CATCAG ATTTACCAAAACCTC CD2865 3350919 - 3350386 - | putative bacterioferritin TERM 3672 3351048 - 3351011 - R 86 -9.5 -3.97331 | overlap 3351017 AATCTACTTAAATAA TAAAAAGCCATATTAAT TAAA ATTAACATGACCTTTTA TCCACAAAATTACTT TERM 3673 3351042 - 3351017 - R 83 -6.3 -5.38549 | overlap 3351011 CTTAAATAATAAAAA GCCATATTAAT TAAA ATTAACATGAC CTTTTATCCACAAAA CD2866 3352418 - 3351069 - | putative regulatory protease tldD 3353812 - 3352430 - | putative regulatory protease TERM 3674 3352664 - 3352676 + g 71 -7.7 -3.53012 | TGCAAAATTAAACTC TCCTG TTA CAGGA TTTACAGAACCACCA CD2868 3354047 - 3355270 + | putative oxidoreductase TERM 3675 3355759 - 3355740 - g 75 -4.4 -5.18561 | gap 1, opp_overlap 3355740 CAAAGAGGTAAAAAA TTCCA-ATG AAC CATTTGGAA TAATTGGATTTAATA TERM 3676 3356612 - 3356634 + G 77 -4.8 -5.32944 | ATTGTGCTGCCATAC CTCCATCTCT AAT AGAGAGTGAG TTTTTTGGTTATGAG CD2869 3355444 - 3357360 + | putative sigma-54 dependent regulatory protein TERM 3677 3357389 - 3357419 + F 73 -5.7 -4.8743 | gap 1, opp_overlap 3357389 CTATATATATCAAAA CGTTTTATGT-TTA ATTT TAATACATAAGACG TTTATTTGTTTTCAA kdgT 3357631 - 3358605 + | 2-keto-3-deoxygluconate permease uxaA' 3358626 - 3358901 + | altronate hydrolase (N-terminus) uxaA 3358914 - 3360077 + | putative altronate hydrolase TERM 3678 3360173 - 3360204 + F 88 -6.8 -5.46629 | gap 1, opp_overlap 3360173 3360172 TTCTATACTGAAAAG GAACTG-TATCAAAA TTA TTTTGAAAACAGTTC TTTTTTTAACCTCTT TERM 3679 3361808 - 3361790 - g 78 -9.6 -3.15056 | overlap 3361788 AGTTTCAATTCAAGA CCGTGCAA ATG TTGCACGA AAAAATAATAAAGGA TERM 3680 3362159 - 3362147 - g 72 -7.7 -3.63656 | opp_overlap 3362142 3362140 AAAATGGATAGATAA TGGAG AAA CTCCA ATACCTGTTTCAGTT CD2873 3360414 - 3362693 + | putative signaling protein TERM 3681 3362748 - 3362707 - T 100 -14.9 -5.95449 | opp_overlap 3362707 AAATAAAATAAAAAA CTTGTCTCTATAAAATAAT TTTA ATCATTTTATAAAGACAAG TTTTTTTATTTTCCA TERM 3682 3362707 - 3362748 + T 100 -10.5 -6.09196 | opp_overlap 3362707 AAATAAAATAAAAAA CTTGTCTCTATAAAATAAT TTTA ATCATTTTATAAAGACAAG TTTTTTTATTTTCCA CD2874 3364128 - 3362788 - | putative drug/sodium antiporter fhuC 3364922 - 3364140 - | putative ferrichrome ABC transporter,ATP-binding protein fhuG 3365959 - 3364937 - | putative ferrichrome ABC transporter, permease protein fhuB 3366978 - 3365965 - | putative ferrichrome ABC transporter, permease protein TERM 3683 3366251 - 3366263 + g 82 -6.3 -5.32882 | opp_overlap 3366251 3366250 ACTATACATATAAAT CTAAC AAA GTTAG TTTTTTGTCCTAATC TERM 3684 3367093 - 3367058 - R 100 -12.2 -4.76644 | gap 1, opp_overlap 3367057 AAGATTTATTAAAAA TAGGTGTGAAA-AATGA ATA TCATTATCTCACACCTA CTAAGTTAAGAATTA fhuD 3368044 - 3367106 - | putative ferrichrome ABC transporter,substrate-binding protein CD2879 3368314 - 3368778 + | hypothetical protein celC 3369207 - 3368890 - | PTS system, lichenan-specific IIA component CD2881 3369951 - 3369220 - | hypothetical protein celF 3371287 - 3369977 - | 6-phospho-beta-glucosidase TERM 3685 3370196 - 3370208 + g 82 -4.1 -5.64873 | ATATCCTATACTTAT TGGTT TTG GACCA TTTTTTGTTATTACA celB 3372677 - 3371364 - | PTS system, lichenan-specific IIC component TERM 3686 3372287 - 3372307 + g 81 -8.4 -4.18161 | ATCCTTCAACTACTG TAGTTCCT CCCTC AGGAACTA TTTTACCAATTTGTG TERM 3687 3372641 - 3372606 - G 70 -8.4 -3.15544 | gap 1, opp_overlap 3372604 3372603 3372606 TCTTACTGCTACTAA GTGCCTTTGAGCTCCTA TTT TAGCAGCT-ACAGGCAC TATATATTTATCCAT TERM 3688 3372606 - 3372641 + g 72 -8.4 -3.23737 | gap 1, opp_overlap 3372606, overlap 3372604 3372603 TCTTACTGCTACTAA GTGCCTTTGAGCTCCTA TTT TAGCAGCT-ACAGGCAC TATATATTTATCCAT licB 3373010 - 3372699 - | PTS system, lichenan-specific IIB component CD2885 3373914 - 3373210 - | GntR family transcriptional regulator CD2886 3375366 - 3374005 - | putative drug/sodium antiporter TERM 3689 3375216 - 3375200 - G 72 -2.9 -5.47821 | opp_overlap 3375215, overlap 3375201 AGCCATGGAAAAAAA CCAGCTG TTC CAACTGC AGCTACTGCTTTACT TERM 3690 3375215 - 3375225 + g 71 -6.8 -3.922 | opp_overlap 3375200 CCAGCTGTTCCAACT GCAG CTA CTGC TTTACTTCCGGCTTT TERM 3691 3376852 - 3376833 - g 72 -5.2 -4.83246 | opp_overlap 3376833 3376836 TCACAAAGAAATAAA TAATATTA TAAA TAATATTA ATTTAAAAATAGTTG TERM 3692 3376882 - 3376862 - g 71 -4.8 -4.76892 | ATATTAATTTAAAAA TAGTTGAA GAAAA CTCAACTA ATGAATTAAAATTAT CD2887 3375865 - 3377019 + | putative signaling protein CD2888 3378818 - 3377100 - | ABC transporter, permease protein TERM 3693 3377730 - 3377743 + g 76 -5.3 -5.16151 | CGTCCCTAGAATAGC TGTCA ATAG TGACA TTTTTATTGAATTTA TERM 3694 3378738 - 3378749 + g 83 -3 -5.76633 | opp_overlap 3378738 AGACATAACTAATAC TGTA AGCA TACA TTTTTTTATATCTAA TERM 3695 3380072 - 3380093 + r 76 -6 -4.86033 | ATGCCAGCCAGTTGC CAAAAAGA TATTGT TCTTTTTG TTTTTATGAAAGTTT TERM 3696 3380265 - 3380232 - R 100 -5.4 -6.20267 | TCAAAAACAAAAAAA GAAACTACAATCTA TTAGCC TAGAGTGAAGTTTC ATTAACTAAATATTA CD2889 3380421 - 3380278 - | hypothetical protein TERM 3697 3380332 - 3380342 + g 83 -6.8 -5.1417 | opp_overlap 3380323, overlap 3380325 3380324 CTCAAAGTCACTCCT GCCA GAG TGGC TTTTTACTTTTCTGG TERM 3698 3380394 - 3380377 - G 72 -6.3 -4.24887 | AATATATGTAATAAA GCTAGCT GTTA AACTAGC TAACACTCCTAGTAA TERM 3699 3380894 - 3380872 - R 100 -9.2 -5.13137 | opp_overlap 3380870 3380872 CAAAGAAATGAAAAA GCACTCTCCA TAA TGAAGAATGC TCTTTTTAATAATGT CD2890 3381818 - 3381114 - | hypothetical protein TERM 3700 3381617 - 3381645 + g 75 -4.8 -5.07567 | opp_overlap 3381623 3381625 TATAGTTCTTATCTT TAATTATAGATT CCTCA AATCTAAAATTA TTTTTTACAATATCC CD2891 3382251 - 3381820 - | hypothetical protein CD2892 3382865 - 3382269 - | hypothetical protein TERM 3701 3383392 - 3383363 - R 100 -10.1 -5.03314 | opp_overlap 3383363 3383366, overlap 3383366 TTGAGGTGTAAAAAA GGAGGTAACAACT AACT AGTTGCTACCTTC TAATCTATCTATCAA TERM 3702 3383363 - 3383392 + r 79 -10.1 -2.74597 | opp_overlap 3383363 3383366, overlap 3383366 TTGAGGTGTAAAAAA GGAGGTAACAACT AACT AGTTGCTACCTTC TAATCTATCTATCAA TERM 3703 3383366 - 3383389 + r 75 -8.2 -3.51637 | opp_overlap 3383363 3383366, overlap 3383363 AGGTGTAAAAAAGGA GGTAACAACT AACT AGTTGCTACC TTCTAATCTATCTAT TERM 3704 3383389 - 3383366 - R 90 -10.4 -3.38056 | opp_overlap 3383366 3383363, overlap 3383363 AGGTGTAAAAAAGGA GGTAACAACT AACT AGTTGCTACC TTCTAATCTATCTAT CD2893 3383674 - 3383378 - | hypothetical protein CD2894 3384506 - 3383691 - | putative phage endolysin TERM 3705 3383869 - 3383881 + g 82 -6.3 -5.29742 | TAGTCTTTTATATCT GTTAC TAA GTAAC TTTCTTTTTTTCTCT CD2894A 3384763 - 3384503 - | phage holin TERM 3706 3384736 - 3384709 - G 74 -7 -4.27117 | opp_overlap 3384709 CTCCTATAACATAAA GAGCAGCAACTA AAAT CAGTAACTGCTC TGGTATAAAACTTAT CD2895 3385013 - 3384783 - | hypothetical protein TERM 3707 3385062 - 3385044 - R 93 -7.5 -5.21709 | opp_overlap 3385044 3385042 3385047 TTTGATATTAAAAAA GAACCTA TTTTG TAGGTTC TGTTCCTTCCACTAC TERM 3708 3385044 - 3385062 + r 72 -8.2 -3.24825 | opp_overlap 3385044, overlap 3385042 3385047 TTTGATATTAAAAAA GAACCTAT TTT GTAGGTTC TGTTCCTTCCACTAC CD2896 3385523 - 3385230 - | hypothetical protein CD2897 3387246 - 3385540 - | hypothetical protein TERM 3709 3386466 - 3386510 + g 74 -9.5 -2.8055 | opp_overlap 3386466 3386464, overlap 3386463 3386461 3386470 ATATGTTCAAAAATG GTAATGCTTGTAGTAATGTTA TTT TAGCATAACCATGAGCATTAC TAGTATTATCACCTG CD2898 3388058 - 3387255 - | putative phage tail fiber protein CD2899 3388687 - 3388070 - | phage protein CD2900 3389729 - 3388680 - | putative phage tail protein CD2901 3390149 - 3389730 - | phage protein TERM 3710 3390034 - 3390044 + g 72 -4 -5.14985 | opp_overlap 3390034, overlap 3390041 TCATCACAAATACCA TCTA TCT TAGA TTTTTCTATATTTAA CD2902 3390414 - 3390154 - | phage protein CD2903 3392398 - 3390428 - | putative phage cell wall hydrolase TERM 3711 3391278 - 3391294 + g 70 -5.3 -4.60949 | overlap 3391260 TTTGATAACTTATTT TTAAATA CTT TATTTAA TTTATTTATCATATC TERM 3712 3391327 - 3391346 + g 74 -2.1 -5.52079 | TGTCTTCTTTACTTG TGGTACT TTGTGC AGGACCA TTTTTCTTTTCATCT TERM 3713 3391545 - 3391528 - G 76 -2.7 -5.58209 | opp_overlap 3391528 CTAAATCTAAAAAAA CAGGT ACTAAACA ACCTG CTCTTACTCTAATAT CD2904 3393080 - 3392391 - | putative phage cell wall hydrolase CD2905 3395447 - 3393096 - | phage membrane protein TERM 3714 3395485 - 3395502 + r 72 -4.1 -5.32396 | opp_overlap 3395485, overlap 3395480 TTTTCACATAAAAAA CACCTAC CTAA GTAAGTG TTTTATTTTTAGTAT TERM 3715 3395502 - 3395485 - R 83 -6.3 -5.36441 | opp_overlap 3395485 3395480 TTTTCACATAAAAAA CACCTAC CTAA GTAAGTG TTTTATTTTTAGTAT CD2906 3396087 - 3395518 - | phage protein TERM 3716 3395615 - 3395637 + g 79 -7.8 -4.34402 | AGACCAATGCCTCCT GCTATAGTAG CTC CTGTTATAGC TTTTCCTATGCCAAA CD2907 3396691 - 3396131 - | phage lipoprotein TERM 3717 3396784 - 3396803 + r 78 -6.5 -4.85195 | opp_overlap 3396784, overlap 3396778 CTTTCATTAAAAAAA CACTTAC TCATTT GTAAGTG TTTTTGAATTATTTT TERM 3718 3396803 - 3396784 - R 88 -6.5 -5.52384 | opp_overlap 3396784 3396778 CTTTCATTAAAAAAA CACTTAC TCATTT GTAAGTG TTTTTGAATTATTTT TERM 3719 3397115 - 3397075 - R 71 -8.6 -3.03441 | gap 1, opp_overlap 3397075, overlap 3397077 3397081 TACCATTTTTTAACA GACAAAGCACTTGAA-ACT ATAC AATATCCAAGTGCTTTATC TATATTATTTATTCT TERM 3720 3398231 - 3398243 + r 80 -3.5 -5.84011 | AATCAAGTTTTCAAT TTTTT AAT AAAAA TTTTTATTTTTTATT CD2907A 3398516 - 3398355 - | hypothetical protein TERM 3721 3398412 - 3398428 + g 76 -5.1 -5.0925 | overlap 3398409 GCCACTTTTACTCTT GCCAC GAGTTGA GTGGC TTTTTACTTTTAGAA CD2908 3399297 - 3398857 - | phage protein TERM 3722 3399366 - 3399340 - R 100 -8.2 -5.36441 | opp_overlap 3399340 TTTTCATATAAAAAA TACACATATATA ATT TATAAATGTGTA TTTTACTCCATTCCT TERM 3723 3399340 - 3399366 + r 80 -8.2 -4.31379 | opp_overlap 3399340 TTTTCATATAAAAAA TACACATATATA ATT TATAAATGTGTA TTTTACTCCATTCCT CD2909 3399839 - 3399369 - | phage protein CD2910 3401166 - 3399856 - | phage protein TERM 3724 3401061 - 3401045 - G 81 -9.5 -3.67864 | opp_overlap 3401045 CAATCTAACTCTAAA GGTATTG CAA CAATACC TCTATCCGATAATGA TERM 3725 3401045 - 3401061 + g 75 -9.5 -2.90212 | opp_overlap 3401045 CAATCTAACTCTAAA GGTATTG CAA CAATACC TCTATCCGATAATGA CD2910A 3401353 - 3401168 - | hypothetical protein CD2911 3401777 - 3401337 - | phage protein TERM 3726 3401687 - 3401668 - G 87 -3.6 -5.95946 | GGAACAATAAAAAAA CAAGGT TCATTAAT ACCTTG CTCCACATCTTCGCT CD2912 3402192 - 3401767 - | phage protein CD2913 3402539 - 3402192 - | phage protein CD2914 3402943 - 3402533 - | hypothetical protein CD2915 3403177 - 3402944 - | hypothetical protein TERM 3727 3402973 - 3402983 + g 70 -4 -4.95547 | GTTTATTTTTCTCTT TAAG CTG CTTA TTTTCTTCTTCTAAA CD2916 3404076 - 3403177 - | putative phage major capsid protein CD2917 3404651 - 3404088 - | scaffold protein TERM 3728 3404703 - 3404692 - R 86 -4.4 -5.9218 | opp_overlap 3404687 3404692 TACACAATAAAAAAA GTCT TTAA AGAC TTTTGTCTAGTGATT TERM 3729 3404958 - 3404929 - R 70 -5.1 -4.84311 | overlap 3404924 TTTTACATAATAAAA GCACCTACTAA TTTATTGT TCAGTAAGTGC TTCTAACATTGATAA CD2919 3405212 - 3404961 - | hypothetical protein CD2920 3406662 - 3405169 - | phage protein TERM 3730 3405508 - 3405526 + gr 77 -7.6 -4.03253 | CCAATTTGTATTCTT TGATATTT TGG AAATATCA TCTTTTCTATTTCTA CD2921 3408091 - 3406652 - | phage portal protein TERM 3731 3406771 - 3406753 - G 78 -9.6 -3.14881 | opp_overlap 3406755 CAAGTTCGTCATTAA CATCCTCG ACC CAAGGATG GTTAGAAACAATAGT CD2922 3409350 - 3408097 - | phage terminase large subunit CD2923 3410020 - 3409328 - | phage protein TERM 3732 3409847 - 3409883 + g 91 -5.2 -5.72207 | opp_overlap 3409850, overlap 3409845 3409850 TGAATTTTTATTAGA AAAGGGTGCACC CCTTTTATTTATA GGTGCACCCTTC TTTTTTTCCTTTGAC TERM 3733 3409880 - 3409850 - G 88 -9 -4.4648 | opp_overlap 3409845 3409847 3409850 ATTTTTATTAGAAAA GGGTGCACCCCT TTTATTT ATAGGTGCACCC TTCTTTTTTTCCTTT TERM 3734 3409850 - 3409880 + g 82 -6.9 -4.90519 | opp_overlap 3409850, overlap 3409845 3409847 ATTTTTATTAGAAAA GGGTGCACC CCTTTTATTTATA GGTGCACCC TTCTTTTTTTCCTTT TERM 3735 3410048 - 3410093 + r 78 -9.3 -3.02211 | opp_overlap 3410061, overlap 3410061 TTATTTGTTTGTTTT GGGAATAAAAAAAGAACCTCA TAAT TGAGATTCTTTTTTTGTTTAC TCTACTTTAAGATTC TERM 3736 3410080 - 3410061 - R 93 -7.2 -5.7946 | opp_overlap 3410048 3410061 TTGGGAATAAAAAAA GAACCTCA TAAT TGAGATTC TTTTTTTGTTTACTC TERM 3737 3410061 - 3410080 + r 91 -5 -5.99154 | opp_overlap 3410061, overlap 3410048 TTGGGAATAAAAAAA GAACCTCA TAAT TGAGATTC TTTTTTTGTTTACTC CD2924 3410317 - 3410090 - | hypothetical protein CD2925 3410441 - 3410758 + | hypothetical protein TERM 3738 3410982 - 3410963 - T 91 -7.2 -5.626 | opp_overlap 3410963 TATTGTATAAAAAAA GACCATCT ATCA AGATAGTC ATTTTAGATTTTATG CD2926 3411614 - 3411003 - | hypothetical protein TERM 3739 3412111 - 3412135 + r 77 -6.5 -4.72272 | opp_overlap 3412111 3412112, overlap 3412112 TTTTAAAAAGTAAAA TGCTAAGTTTG GAG TAAACTTAGCC TTTTTAGTAGGGAGA TERM 3740 3412135 - 3412111 - R 73 -5.8 -4.77757 | opp_overlap 3412111 3412112, overlap 3412112 TTTTAAAAAGTAAAA TGCTAAGTTT GGAGT AAACTTAGCC TTTTTAGTAGGGAGA TERM 3741 3412134 - 3412112 - R 82 -9.3 -3.4557 | opp_overlap 3412111 3412112, overlap 3412111 TTTAAAAAGTAAAAT GCTAAGTTT GGAGT AAACTTAGC CTTTTTAGTAGGGAG TERM 3742 3412112 - 3412134 + r 87 -10 -3.43042 | opp_overlap 3412112 3412111, overlap 3412111 TTTAAAAAGTAAAAT GCTAAGTTTG GAG TAAACTTAGC CTTTTTAGTAGGGAG TERM 3743 3412405 - 3412391 - R 95 -5.7 -6.13503 | opp_overlap 3412391 TAGTAATAAAAAAAA GACCA TACAC TGGTC TTAATTAAATTCATA TERM 3744 3412569 - 3412588 + r 93 -9.2 -4.45117 | opp_overlap 3412564 3412569 TTCTATATAATTTAA GCGAGGTC ATAA GTCCTCGC TTTATTTAAAATATA TERM 3745 3412588 - 3412569 - R 80 -9.2 -3.26449 | opp_overlap 3412569, overlap 3412564 TTCTATATAATTTAA GCGAGGTC ATAA GTCCTCGC TTTATTTAAAATATA CD2927 3413769 - 3412606 - | putative phage DNA-binding protein TERM 3746 3413286 - 3413276 - G 70 -5.4 -4.61231 | opp_overlap 3413269 3413276 GTAGAGGTTGAAAAA CTTG TTA CAAG TATTCCATGTTGCTC TERM 3747 3413383 - 3413404 + g 93 -10.3 -3.92592 | opp_overlap 3413367 3413366, overlap 3413371 AGCTTCTTCTGGTGT TTTACCAGA ACAA TCTGGTAAA TTTAATGTTGGGAAT CD2928 3414543 - 3413788 - | hypothetical protein CD2929 3415352 - 3414864 - | hypothetical protein TERM 3748 3415415 - 3415432 + r 100 -7.7 -6.01725 | opp_overlap 3415414 ATATTTTTGACAAGT GGAGTGT GAAA GCACTCC TTTTTTCTTTTTATT CD2930 3416186 - 3415446 - | putative phage anti-repressor protein CD2931 3416668 - 3416249 - | phage protein CD2932 3417146 - 3416646 - | hypothetical protein CD2933 3417513 - 3417187 - | hypothetical protein CD2934 3417955 - 3417584 - | hypothetical protein TERM 3749 3417879 - 3417896 + g 77 -7.1 -4.254 | opp_overlap 3417878 CCTTCTTCTGAATAC TCAAAGT CTAC ACTTTGA TTTCTTACCTGTTCC CD2935 3418513 - 3418130 - | hypothetical protein CD2936 3419520 - 3418525 - | hypothetical protein CD2937 3419890 - 3419615 - | hypothetical protein CD2938 3420878 - 3420498 - | hypothetical protein TERM 3750 3420824 - 3420835 + g 71 -3 -5.252 | GCTCAAACATATCTT CTAT ATCA ATAG TTTTTTCTAAAAATG CD2939 3421232 - 3420882 - | hypothetical protein CD2940 3421507 - 3421244 - | hypothetical protein CD2941 3421997 - 3421581 - | putative phage single stranded DNA binding protein CD2942 3422186 - 3422013 - | putative phage resolvase/integrase (partial) TERM 3751 3422200 - 3422238 + r 100 -10.7 -4.37871 | gap 1, overlap 3422201 ATTTTATACCTCCCC TTTCTAGGAAGT-AATAT ATTG ATATTTACTTCCTAGAAG TTTAATTTTATTTAA TERM 3752 3422201 - 3422237 + r 93 -12 -3.21096 | gap 1, overlap 3422200 TTTTATACCTCCCCT TTCTAGGAAGT-AATAT ATTG ATATTTACTTCCTAGAA GTTTAATTTTATTTA CD2943 3423196 - 3422246 - | putative phage replication protein TERM 3753 3422771 - 3422781 + g 74 -8.2 -3.55622 | overlap 3422756 CCGACCTCGGTTTTG CCGG CTT CCGG TTTCACCGACTTCGG CD2944 3423804 - 3423205 - | putative phage essential recombination function protein CD2945 3424314 - 3423805 - | phage protein TERM 3754 3424069 - 3424084 + g 75 -4.8 -5.10208 | CTTTATGTTACTTTT TAATCT ATCA AGATTA TTTTTCTTAACCTTC TERM 3755 3424171 - 3424183 + g 90 -6.3 -5.58522 | ATTTATTATTACTGA CACTA TTC TAGTG TTTTTATTTTGTATC TERM 3756 3424329 - 3424348 + r 73 -3 -5.63236 | gap 1, overlap 3424328 3424333 TAATTTCCCTCCGTT TATG-CTAT AAT ATAGTCATA TTTTTATTTTTAAAT TERM 3757 3424376 - 3424394 + r 93 -7.4 -5.76633 | opp_overlap 3424378 AATATTTTCTGAATC GAGCCACT CCT AATGGCTC TTTTTTTATATCTGG CD2946 3424717 - 3424400 - | hypothetical protein CD2947 3425044 - 3424817 - | hypothetical protein CD2947A 3425207 - 3425019 - | hypothetical protein CD2948 3426067 - 3425273 - | putative phage anti-repressor CD2949 3426336 - 3426115 - | putative phage repressor CD2950 3426490 - 3426945 + | putative phage repressor CD2951 3426963 - 3427436 + | phage protein CD2952 3427501 - 3428859 + | phage site-specific recombinase CD2953 3430143 - 3429094 - | ABC transporter, substrate-binding protein TERM 3758 3430367 - 3430402 + r 80 -6.4 -4.92363 | gap 1, opp_overlap 3430367 TTTAAACATAAAAAA TAAGTCTAACCT-CTAT AAA GTAGAATGTTAGACTTA TTTTTATAAGTATTT TERM 3759 3430402 - 3430367 - R 100 -7.9 -5.56264 | gap 1, opp_overlap 3430367 TTTAAACATAAAAAA TAAGTCTAAC-CTCTA TAAAG TAGAATGTTAGACTTA TTTTTATAAGTATTT ntpD 3431088 - 3430420 - | V-type ATP synthase subunit D TERM 3760 3430617 - 3430634 + g 77 -4.9 -5.24449 | gap 1 TCTTTTCTATCTCTT GTGCA-AG AAG CTGTGCAC TTTTTTCACTTTCTG ntpB 3432467 - 3431094 - | V-type ATP synthase subunit B TERM 3761 3431653 - 3431639 - G 74 -7.2 -3.97834 | opp_overlap 3431643, overlap 3431643 CAAGGTCAGTATAAA GATATC CTG GATATC CACGACGTCCTGGAA TERM 3762 3431747 - 3431768 + g 73 -8.1 -3.45849 | opp_overlap 3431743 3431741 TAACAAGTACATGCA TATCTTGCT CGAA AGCAAGGTA TTCTGCTGCTGTAAG ntpA 3434242 - 3432464 - | V-type ATP synthase subunit A TERM 3763 3433517 - 3433527 + g 70 -5.4 -4.66833 | TTTAGCAAGCTGATG CTGT GTA ACAG TTTTTCCACTTCCAA ntpG 3434682 - 3434359 - | V-type ATP synthase subunit F ntpC 3435646 - 3434669 - | V-type ATP synthase subunit C ntpE 3436224 - 3435661 - | V-type sodium ATP synthase subunit E ntpK 3436767 - 3436276 - | V-type ATP synthase subunit K ntpI 3438695 - 3436770 - | V-type sodium ATP synthase subunit I TERM 3764 3436896 - 3436908 + g 76 -7.7 -3.8709 | opp_overlap 3436896 3436894 3436892 ACTTGTATGAACATA TGCAC CTA GTGCA TTTATAAGAAGGTTT TERM 3765 3437668 - 3437696 + g 85 -8.3 -4.67697 | GGATAGCTGTACATG TTAGTTACACTTT CAA AAGGTGTTACTAA TTTATTGTTTTCAAG TERM 3766 3438424 - 3438446 + g 89 -3.4 -6.23545 | TCAATTTTGTTAAAC TCTCTTTTTG GTG CAAGTAGGGA TTTTTTTTGTTTCAC CD2961 3439008 - 3438697 - | hypothetical protein TERM 3767 3438855 - 3438867 + g 78 -4.1 -5.47218 | TAAGAGTTTCTTCCA TAAGC TTT GCTTG TTTTTTTACATCAGC CD2962 3439913 - 3439638 - | hypothetical protein TERM 3768 3440004 - 3439972 - R 70 -4.2 -4.9725 | overlap 3439973 3439987 AGCTTTATATAAAAA GGAAGCCATCCTAA ATAAA CTAAGATGACTTCG CTTAACTGTTAGCAA TERM 3769 3440003 - 3439973 - R 72 -7.7 -3.57627 | overlap 3439972 3439987 GCTTTATATAAAAAG GAAGCCATCCTAA ATAAA CTAAGATGACTTC GCTTAACTGTTAGCA CD2963 3441437 - 3440028 - | putative peptidoglycan-binding exported protein TERM 3770 3441598 - 3441574 - R 93 -9.5 -4.38712 | opp_overlap 3441569 3441574 3441575 3441577, overlap 3441575 GTTATTTCTATAAAA CCATTTTATCT TTT AGATAAAATGA TTATTATAAATCCCC TERM 3771 3441574 - 3441598 + r 70 -7.3 -3.8211 | opp_overlap 3441574 3441575, overlap 3441569 3441575 3441577 GTTATTTCTATAAAA CCATTTTATCT TTT AGATAAAATGA TTATTATAAATCCCC TERM 3772 3441575 - 3441597 + r 82 -10.8 -2.88945 | opp_overlap 3441574 3441575, overlap 3441569 3441574 3441577 TTATTTCTATAAAAC CATTTTATCT TTT AGATAAAATG ATTATTATAAATCCC TERM 3773 3441597 - 3441575 - R 87 -10.8 -3.22906 | opp_overlap 3441569 3441575 3441574 3441577, overlap 3441574 TTATTTCTATAAAAC CATTTTATCT TTT AGATAAAATG ATTATTATAAATCCC TERM 3774 3441748 - 3441726 - R 72 -5 -5.06451 | opp_overlap 3441726 TACTATTTTAAAAAA GAAACTAA TTTTGTG TTAGTTTC TTTATCTTAACTTAT CD2964 3442470 - 3441808 - | hypothetical protein CD2965 3444943 - 3442724 - | putative signaling protein TERM 3775 3444006 - 3444030 + g 71 -8.9 -2.73681 | opp_overlap 3444005 TCTTTTTCATTAGAT TTTTTTATATA AAT TATATAAAAAA TAATTGCAATAAATA TERM 3776 3444118 - 3444143 + g 76 -7.7 -3.91421 | TAAATACAACAGTTT CTGGAATTGAA AAAA TTAAATTCCAG TCTTTTATATAATTA TERM 3777 3445190 - 3445155 - R 100 -13 -5.95539 | gap 1, opp_overlap 3445155 TCTCAAACAAAAAAA CTCTTATACAATAAAAC TTT GTTTTAT-GTATAAGAG TTTTTATTTTATCTA TERM 3778 3445155 - 3445190 + r 100 -13 -5.58522 | gap 1, opp_overlap 3445155 TCTCAAACAAAAAAA CTCTTATACAATAAAAC TTT GTTTTAT-GTATAAGAG TTTTTATTTTATCTA adhE 3447822 - 3445219 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 3779 3445612 - 3445598 - G 72 -8.6 -3.0497 | opp_overlap 3445611 AGAGCATTTGCAACA CCATGT GGT ACATGG TGGAAAGCACCTAAT TERM 3780 3446060 - 3446075 + g 71 -3.2 -5.24796 | TTTTCACCCATTTTA GGGAAT GTAT ATACCC TTTTTCTTATATCCA CD2966A 3448377 - 3448577 + | hypothetical protein TERM 3781 3448739 - 3448711 - T 81 -5.4 -5.29445 | gap 1, opp_overlap 3448711 TTTCAACAAGAAAAA GAGGCT-TCTC TCTATTTT GAGACAGCCTC TTTGCTAGTATTTTA spoVFB 3449374 - 3448784 - | dipicolinate synthase subunit B dpaA 3450252 - 3449377 - | dipicolinate synthase subunit A TERM 3782 3449425 - 3449446 + g 72 -8.1 -3.34398 | opp_overlap 3449425 3449424, overlap 3449424 AGCGTTAACAAGAAT TTCACCAGA TGTC TTTGGTGAA TATTTACCAGGAAGC TERM 3783 3449529 - 3449510 - G 70 -6.4 -4.03767 | opp_overlap 3449525, overlap 3449504 3449511 TTAACAACAGAATAA TCTACTCC TCCA GGAGAAGA AGCTATATCTATAAT CD2969 3451719 - 3450328 - | putative AMP-binding protein CD2970 3452859 - 3451723 - | putative thiolase bioY 3453436 - 3452891 - | putative biotin synthase TERM 3784 3453510 - 3453489 - H 71 -8.1 -3.01912 | opp_overlap 3453489 3453493 3453505 3453505, overlap 3453493 3453506 TTATATGTACATATA CAAAGCTTC TATT AAAGCTTTG TTTTAGTATAAAATA TERM 3785 3453489 - 3453510 + H 75 -7.4 -4.35116 | opp_overlap 3453489 3453493 3453506, overlap 3453493 3453505 3453505 TTATATGTACATATA CAAAGCTT CTATTA AAGCTTTG TTTTAGTATAAAATA CD2972 3453760 - 3454539 + | hypothetical protein TERM 3786 3454677 - 3454627 - T 100 -13.7 -2.89659 | opp_overlap 3454627 3454632, overlap 3454632 TACACTTATAAGAAT TAAAATTGCTATGAAACTAGTTC TTGAT GAACTAATTTCATGGCAATTTTC TATAATCTAATAATT TERM 3787 3454627 - 3454677 + T 100 -13.7 -2.88212 | opp_overlap 3454627 3454632, overlap 3454632 TACACTTATAAGAAT TAAAATTGCTATGAAACTAGTTC TTGAT GAACTAATTTCATGGCAATTTTC TATAATCTAATAATT TERM 3788 3454632 - 3454672 + T 100 -13.6 -4.5954 | opp_overlap 3454627 3454632, overlap 3454627 TTATAAGAATTAAAA TTGCTATGAAACTAGTTC TTGAT GAACTAATTTCATGGCAA TTTTCTATAATCTAA TERM 3789 3454672 - 3454632 - T 100 -13.6 -4.59414 | opp_overlap 3454632 3454627, overlap 3454627 TTATAAGAATTAAAA TTGCTATGAAACTAGTTC TTGAT GAACTAATTTCATGGCAA TTTTCTATAATCTAA CD2972A 3454874 - 3454704 - | hypothetical protein CD2973 3455422 - 3454994 - | putative acetyltransferase CD2975 3457220 - 3456942 - | hypothetical protein CD2976 3458191 - 3457211 - | hypothetical protein CD2977 3458712 - 3458194 - | hypothetical protein CD2978 3461081 - 3458760 - | hypothetical protein CD2979 3461793 - 3461092 - | hypothetical protein CD2980 3462709 - 3461795 - | hypothetical protein CD2981 3464588 - 3462711 - | hypothetical protein CD2982 3465331 - 3464594 - | hypothetical protein CD2983 3466326 - 3465409 - | hypothetical protein TERM 3790 3466561 - 3466524 - R 73 -2.9 -5.64304 | TAATACAATAAAAAA TATTACTGAAAAAATAA ACAT CTATAATTCCAGTAATA TTAATTAATTTTAAA CD2984 3468522 - 3466606 - | ABC transporter, permease protein TERM 3791 3466937 - 3466925 - G 72 -2.7 -5.39721 | overlap 3466926 3466929 TTATTATATAAAAAA CTACT TGT AGTAA CAAAGAAAATTAAAC CD2985 3469268 - 3468522 - | ABC transporter, ATP-binding protein bacA2 3470226 - 3469372 - | undecaprenyl pyrophosphate phosphatase TERM 3792 3470364 - 3470339 - R 95 -13.5 -2.97021 | opp_overlap 3470343, overlap 3470343 TCTGCAAACATTACA CAAACCTTACA TCTA TGTAAGGTTTG CAAATAAACTCTCTT TERM 3793 3470343 - 3470360 + r 75 -8.5 -3.57462 | opp_overlap 3470339 3470343 CAAACATTACACAAA CCTTACA TCTA TGTAAGG TTTGCAAATAAACTC TERM 3794 3470360 - 3470343 - R 79 -8.5 -4.15197 | opp_overlap 3470343, overlap 3470339 CAAACATTACACAAA CCTTACA TCTA TGTAAGG TTTGCAAATAAACTC CD2987 3471475 - 3470471 - | two-component system histidine kinase TERM 3795 3470649 - 3470661 + g 71 -4.8 -4.77986 | opp_overlap 3470649 TCTCCTGTAAAAAAT GGGT CAAAT ACCC TTTTTAAATCTTTAG TERM 3796 3471161 - 3471181 + g 76 -7 -4.41309 | overlap 3471167 TATCTTTTTATGCTC TTGTATCA TTGAT TGATACAA TTTATGTTGTTGTTT TERM 3797 3471454 - 3471442 - G 70 -3.5 -5.12474 | opp_overlap 3471442, overlap 3471432 TATAATATATAAAAA TATAA CCT TTATA ATCTTTTAAAAATAA CD2988 3472177 - 3471485 - | two-component system esponse regulator TERM 3798 3472443 - 3472425 - R 100 -10.4 -5.28983 | opp_overlap 3472421 3472419 3472429 TTCAAAATAGAAAAA GTTACCTT AAT AAGGTAAC TTAAACTTTTATTAT CD2989 3473450 - 3472491 - | ABC transporter, substrate-binding protein CD2990 3474361 - 3473483 - | ABC transporter, ATP-binding protein CD2991 3475136 - 3474354 - | putative ABC transporter, permease protein CD2992 3475766 - 3475137 - | hypothetical protein TERM 3799 3476022 - 3475980 - R 86 -9.6 -4.02856 | opp_overlap 3475958 3475976 3475974 3475982 3475987 3475990 3475993, overlap 3475976 3475972 ATAATAATCTATAAA TATTATATAATAATACTTAT ATA ATTAGTATTATTATTTAATA GCAACAGTTATTCAC TERM 3800 3475987 - 3476015 + r 73 -7.7 -3.72695 | opp_overlap 3475976 3475972 3475980, overlap 3475976 3475974 3475982 3475990 3475993 TCTATAAATATTATA TAATAATACTTAT ATA ATTAGTATTATTA TTTAATAGCAACAGT TERM 3801 3476107 - 3476128 + r 78 -5.9 -4.91459 | opp_overlap 3476108, overlap 3476108 AAATTGCATCAAAAA ATGAAGTCT CAAC AGACTTCAC TTTTTATAACTCTTA TERM 3802 3476127 - 3476108 - R 100 -9.4 -5.16237 | opp_overlap 3476107 3476108 AATTGCATCAAAAAA TGAAGTCT CAAC AGACTTCA CTTTTTATAACTCTT TERM 3803 3476108 - 3476127 + r 83 -9.4 -3.53791 | opp_overlap 3476108, overlap 3476107 AATTGCATCAAAAAA TGAAGTCT CAAC AGACTTCA CTTTTTATAACTCTT CD2993 3476787 - 3476161 - | hypothetical protein nrdF 3477834 - 3476863 - | ribonucleoside-diphosphate reductase beta chain nrdE 3479946 - 3477847 - | ribonucleoside-diphosphate reductase alpha chain CD2996 3480409 - 3481149 + | hypothetical protein TERM 3804 3481243 - 3481193 - T 100 -13.8 -4.60302 | opp_overlap 3481198, overlap 3481198 ACATAAACAAAATAA CAAAAGAGTATAGATTGTAATTTC AAA AAAATTATAATCTATACTCTTTTT TCTATAGCACATAAG TERM 3805 3481198 - 3481238 + T 100 -15.2 -5.36441 | opp_overlap 3481193 3481198 AACAAAATAACAAAA GAGTATAGATTGTAATTT CAAAA AAATTATAATCTATACTC TTTTTTCTATAGCAC TERM 3806 3481238 - 3481198 - T 100 -13.7 -5.14949 | opp_overlap 3481198, overlap 3481193 AACAAAATAACAAAA GAGTATAGATTGTAATTTC AAA AAAATTATAATCTATACTC TTTTTTCTATAGCAC CD2997 3482473 - 3481277 - | putative iron ABC transporter, ATP-binding protein CD2998 3483501 - 3482476 - | putative iron ABC transporter, permease protein TERM 3807 3482653 - 3482669 + g 71 -4.5 -4.72486 | CAAAACTCTATTATC TGATGTT TTA AATATCA TTTTTGAAATTTGTG CD2999 3484712 - 3483573 - | putative iron ABC transporter, substrate-binding protein TERM 3808 3484860 - 3484836 - R 100 -10.1 -5.92399 | opp_overlap 3484836 TAATAAAATAAAAAA CTTCTCCTAAT TTA ATAAGGAGAAG TTCATATATCAACTT TERM 3809 3484836 - 3484860 + r 87 -10.1 -3.32765 | opp_overlap 3484836 TAATAAAATAAAAAA CTTCTCCTAAT TTA ATAAGGAGAAG TTCATATATCAACTT CD3000 3486058 - 3485165 - | putative dihydrodipicolinate synthase CD3001 3487040 - 3486138 - | putative isomerase/hydrolase TERM 3810 3486673 - 3486691 + g 71 -2.4 -5.4111 | ATTGCCTTTGTCACA CGTTTTGT AAA ATAAACCG TTTTTTGTGGTTCTT CD3002 3488250 - 3487090 - | carbohydrate hydrolase TERM 3811 3487918 - 3487934 + g 79 -5.9 -5.14645 | overlap 3487919 TAAAGTTCCATGTTC TTCTTGT ATT ACAAGAG TTTTTATTGGCTTAT CD3003 3488711 - 3488406 - | carbohydrate hydrolase (N-terminus) CD3004 3489783 - 3488809 - | 2-keto-3-deoxygluconate permease TERM 3812 3489858 - 3489894 + H 95 -11.1 -3.79043 | overlap 3489848 TCTAACGGCCGTTTC GGTTCGTATTTAAGAAC TAA GTTTTTAATTACGAATC TTTGAATTAATGATA CD3005 3490365 - 3491141 + | IclR family transcriptional regulator TERM 3813 3491232 - 3491262 + F 95 -6.3 -6.00086 | opp_overlap 3491232 TTTATACTATAAAAA CAAAGTTGCTG ATTTAACTA CAGTAACTTTG TTTTTTTTATAATAT TERM 3814 3492133 - 3492111 - g 78 -10 -3.16177 | opp_overlap 3492111 3492110 3492117 ATGTTACAGATTCAA CTGCCTTATA TGC TATAAAGCAG ATATTTAAATACCTT CD3006 3491474 - 3492619 + | alcohol dehydrogenase CD3007 3493643 - 3492774 - | hypothetical protein TERM 3815 3493581 - 3493595 + g 73 -3.6 -5.32699 | TAAAGCATATTTATA TATAGG TGC TCTATA TTTTTTAATATTTAG TERM 3816 3494773 - 3494762 - R 76 -4.4 -5.32699 | opp_overlap 3494762 TTAAACAGTAAAAAA GAGA CTTA TCTC TATTTTTTGAGATAG CD3009 3496233 - 3494845 - | putative pyridine-nucleotide-disulfide oxidoreductase TERM 3817 3495010 - 3495027 + g 71 -2.1 -5.4251 | gap 1, opp_overlap 3495003, overlap 3495003 ACATATCATACTAGC TCCAAGTA TCT TA-TTGGA TTTTTTATCTATCAC CD3010 3497631 - 3496354 - | putative cytochrome C biogenesis protein CD3011 3498103 - 3497768 - | putative transcriptional regulator TERM 3818 3498545 - 3498520 - R 100 -10.5 -5.07011 | opp_overlap 3498520 TATACAAATTAAAAA GTCTGGCAGAT TAAT ATCTGTCAGAC TTTAAACAATAAACT TERM 3819 3498520 - 3498545 + r 95 -12.7 -3.55563 | opp_overlap 3498520 TATACAAATTAAAAA GTCTGGCAGAT TAAT ATCTGTCAGAC TTTAAACAATAAACT CD3012 3501172 - 3498572 - | putative glycosyl hydrolase TERM 3820 3499398 - 3499409 + g 70 -4.4 -4.90778 | ACACAAAGTTTTACA TCCA TCAA TGGA TTTTCTTTGGATAAG CD3013 3502407 - 3501292 - | PTS system, IIC component TERM 3821 3502162 - 3502138 - G 76 -6.5 -4.55689 | ATCAGCTATAGAAAA TCCTATAAATG CAG CAATTACAGGA AACATTAATCCTAAT CD3014 3502728 - 3502408 - | PTS system, IIB component TERM 3822 3502679 - 3502698 + g 82 -10.8 -2.65442 | opp_overlap 3502675, overlap 3502691 GCTGCCATATATGTA TGTGCAAC TCCT GTTGCACA TGCTGTAACTGCTAT CD3015 3503192 - 3502731 - | PTS system, IIA component CD3016 3505162 - 3503192 - | putative transcriptional antiterminator TERM 3823 3504966 - 3504976 + g 74 -5.4 -4.89477 | opp_overlap 3504966 3504964, overlap 3504973 CCATCAATATAAACA CCTA TCT TAGG TTTTCTTATTAAAGA TERM 3824 3505103 - 3505119 + g 70 -5.3 -4.55128 | overlap 3505100 TGTATGACCTTCTTT TAATAAA AAC TTTATTA TTTTAATTTCACGAT CD3017 3505322 - 3506176 + | putative sugar uptake protein CD3018 3506888 - 3506421 - | hypothetical protein CD3019 3507925 - 3506993 - | putative transporter TERM 3825 3507886 - 3507874 - G 72 -4.9 -5.00138 | TACCTAAAGTAAAAA TTGAT AAA ATCAA ACTTGCAATAGGTAT TERM 3826 3508004 - 3507976 - R 73 -5.5 -4.84274 | gap 1, opp_overlap 3507976, overlap 3507967 TAATTATATCAAAAA GATGGTCA-AAT TGACAT ATTATGACCATC TTTCTTATATAGAAA TERM 3827 3508080 - 3508110 + r 70 -5.1 -4.79953 | gap 1, opp_overlap 3508080 AATATATTAAGGTAA TTAGTATATTT-AT TTTA ATCAAATATACTAA TTTGTTTATTATTAT TERM 3828 3508279 - 3508260 - R 71 -7.2 -3.85522 | opp_overlap 3508276, overlap 3508262 AAGTTAGCATAACAA TACAGACA ATAA TGTCTGCA AGTATTGTATTGTCC TERM 3829 3508277 - 3508262 - R 72 -7.6 -3.50808 | opp_overlap 3508276, overlap 3508260 GTTAGCATAACAATA CAGACA ATAA TGTCTG CAAGTATTGTATTGT TERM 3830 3509274 - 3509256 - R 83 -6 -5.41359 | AATGAAACTAAAAAA GGTGCT ATTTTCA AGCACC CTACAATTTTACTTT CD3022 3510817 - 3509381 - | hypothetical protein TERM 3831 3510731 - 3510717 - G 81 -10 -3.44552 | opp_overlap 3510716 3510715, overlap 3510715 ATTTCATCAATAATA TCCTGC AAA GCAGGA CCTATGTTGTACGAA CD3023 3512427 - 3511027 - | hypothetical protein TERM 3832 3512098 - 3512108 + g 74 -5.4 -4.90906 | opp_overlap 3512098 AATGTTCTTAATACA GTGT CTT ACAC TTTTTGCTGTTATGA CD3024 3513800 - 3512454 - | hypothetical protein TERM 3833 3514063 - 3514078 + r 72 -7.6 -3.51563 | opp_overlap 3514063 ATCCCAATAGAAAAA CACTCA TTTC TGAGTG TTCTATACAAATTTT TERM 3834 3514078 - 3514063 - R 93 -7.6 -5.09762 | opp_overlap 3514063 ATCCCAATAGAAAAA CACTCA TTTC TGAGTG TTCTATACAAATTTT CD3025 3514843 - 3514169 - | putative iron-sulfur-binding protein CD3026 3515650 - 3514904 - | hypothetical protein TERM 3835 3515922 - 3515894 - R 100 -12.7 -5.86976 | opp_overlap 3515894 TTACAAAATAAAAAA GAACTCCTTAATT TAT AATTAAAGAGTTC TTTTTTATACAACAA TERM 3836 3515894 - 3515922 + r 100 -10.5 -5.24129 | opp_overlap 3515894 TTACAAAATAAAAAA GAACTCCTTAATT TAT AATTAAAGAGTTC TTTTTTATACAACAA crr 3516479 - 3516009 - | PTS system, glucose-specific IIA component TERM 3837 3516144 - 3516124 - G 75 -9.1 -2.98169 | opp_overlap 3516122 GTAATAAGTGATATA CCCTTTGAT TCA ATCAAAGGA CGGTTAATTTTCAAC CD3028 3517102 - 3516503 - | putative phosphosugar isomerase malY 3518304 - 3517120 - | putative bifunctional protein: repressor/cystathionine beta-lyase TERM 3838 3517947 - 3517937 - G 74 -5.4 -4.95758 | ATCACATCATAAAAA GCAT TGT ATGC AGGAGTATTTATAAG TERM 3839 3518245 - 3518283 + g 86 -7.4 -5.25803 | opp_overlap 3518248, overlap 3518246 AAATCTATCTTCTAC ATAGTCCCACTGGGTACA ATA TGTACCCAATCGGTCTAC TTTTTTATCAAAATT TERM 3840 3518246 - 3518282 + g 91 -10.9 -3.74397 | opp_overlap 3518248, overlap 3518245 AATCTATCTTCTACA TAGTCCCACTGGGTACA ATA TGTACCCAATCGGTCTA CTTTTTTATCAAAAT TERM 3841 3518280 - 3518248 - G 85 -11.3 -2.87931 | opp_overlap 3518246 3518245 TCTATCTTCTACATA GTCCCACTGGGTACA ATA TGTACCCAATCGGTC TACTTTTTTATCAAA malX 3519874 - 3518297 - | PTS system, maltose and glucose-specific IIBC component TERM 3842 3519585 - 3519607 + g 74 -2.1 -5.55664 | AATCCTACTAATCCT GAAAAAG CACCAAACT CTTTTTC TTTTTTTAATAATCC TERM 3843 3519971 - 3519926 - R 100 -13.7 -5.01546 | opp_overlap 3519926, overlap 3519940 AAATTTATAGAAAAA CCTAAATCAAAAAACTTAATT TAAT AATTAAGTTTAATGATTTAGG TTTTGCCTGCTCAAC TERM 3844 3519926 - 3519971 + r 100 -13.7 -4.21194 | opp_overlap 3519926 3519940 AAATTTATAGAAAAA CCTAAATCAAAAAACTTAATT TAAT AATTAAGTTTAATGATTTAGG TTTTGCCTGCTCAAC TERM 3845 3519957 - 3519940 - R 81 -5.7 -5.38497 | opp_overlap 3519926, overlap 3519926 ACCTAAATCAAAAAA CTTAATT TAAT AATTAAG TTTAATGATTTAGGT TERM 3846 3520085 - 3520040 - R 95 -7.1 -5.8187 | TATCTAATAAAAAAA CCTAAATCAAAAAACTTAACC TAAT AGTTAAATTCAATGATTTAGG TTTTGCCTGCTTAAC TERM 3847 3520200 - 3520155 - R 80 -3.5 -5.8187 | gap 1 TATCTAATAAAAAAA CCTAAATCAAAAAACTTAATCT AAT AG-TTAAGCTCAATGACTTAGG TTTTGCCTGCTTTAT TERM 3848 3520228 - 3520246 + r 70 -4.6 -5.05113 | TATCAGTTACAATCC TAACAACC ACT GTTTGTTA TTTTATTTATGTGAA CD3031 3521063 - 3520227 - | transcription antiterminator TERM 3849 3521434 - 3521460 + H 75 -4 -5.47914 | opp_overlap 3521434 CATTGGTAATATAAT TTTTAATTTA TATAAAT TAAATTAAAA TTTTTTATAATTTTT TERM 3850 3521803 - 3521772 - H 91 -10.3 -3.66908 | opp_overlap 3521773, overlap 3521768 3521773 CTCCCCCAAAATCAA GTGAGCTACAGTT TCCCCC AACTGTAGCTCAT TTTCGTGTAATTTAA TERM 3851 3521773 - 3521802 + H 100 -13.8 -4.40894 | opp_overlap 3521772 3521768 3521773 TCCCCCAAAATCAAG TGAGCTACAGTT TCCCCC AACTGTAGCTCA TTTTCGTGTAATTTA TERM 3852 3521802 - 3521773 - H 100 -13.8 -2.79823 | opp_overlap 3521773, overlap 3521772 3521768 TCCCCCAAAATCAAG TGAGCTACAGTT TCCCCC AACTGTAGCTCA TTTTCGTGTAATTTA CD3032 3521949 - 3523223 + | putative aminotransferase TERM 3853 3523393 - 3523353 - T 79 -10.2 -2.64091 | gap 1, opp_overlap 3523359 3523366, overlap 3523355 3523359 3523366 AACTATTTTACACTA TACAAACAAAA-AACTCAT TACA ATGAGTTTTTTTGTTTATA TATGAGATTTATTTT TERM 3854 3523386 - 3523359 - T 73 -7.2 -4.11404 | opp_overlap 3523359 3523366, overlap 3523355 3523353 3523366 TTTACACTATACAAA CAAAAAACTCAT TACA ATGAGTTTTTTT GTTTATATATGAGAT TERM 3855 3523359 - 3523387 + T 73 -7 -4.13648 | gap 1, opp_overlap 3523359 3523355 3523353 3523366, overlap 3523366 TTTACACTATACAAA CAAAA-AACTCAT TACA ATGAGTTTTTTTG TTTATATATGAGATT TERM 3856 3523366 - 3523379 + T 95 -5.3 -6.04953 | opp_overlap 3523366 3523359 3523355 3523353, overlap 3523359 TATACAAACAAAAAA CTCAT TACA ATGAG TTTTTTTGTTTATAT TERM 3857 3523379 - 3523366 - T 86 -5.3 -5.76237 | opp_overlap 3523359 3523366, overlap 3523359 3523355 3523353 TATACAAACAAAAAA CTCAT TACA ATGAG TTTTTTTGTTTATAT CD3033 3523747 - 3523430 - | thioredoxin TERM 3858 3523831 - 3523845 + H 71 -7.2 -3.98159 | ACTTTTTTGTAACCG CCTATT TTT AATAGG TTTAATATTATGATA TERM 3859 3523990 - 3523965 - H 80 -8.5 -4.29391 | opp_overlap 3523963 3523965 AATTATAAAATCAAA TTAATAACTAC ATAG GTAGTTACTAA TCTTTTATCAAAGGA TERM 3860 3524276 - 3524263 - g 85 -3.9 -5.80727 | opp_overlap 3524274 AAAAATAAGAAAAAA GAATT TGAC AATTC TATGGATAATCTAAA TERM 3861 3524420 - 3524401 - g 74 -8 -3.84644 | overlap 3524404 ATAAAAAATGCGAAA CAAGAAAT TATA ATTTCTTG CCCTTATGAAGAAAT CD3034 3524014 - 3524766 + | putative sugar-specific transcriptional regulator CD3035 3524753 - 3525634 + | hypothetical protein TERM 3862 3525650 - 3525697 + T 100 -16.1 -5.34309 | opp_overlap 3525653 3525663, overlap 3525653 3525663 TCCCATACCTAATAA AAACAAATAAAAATACTAGCT AACTAA AGCTAGTATTTTTATTTGTTA TTTTTATTTAATAAT TERM 3863 3525694 - 3525653 - T 100 -17.8 -5.12068 | opp_overlap 3525650 3525653 3525663, overlap 3525663 CATACCTAATAAAAA CAAATAAAAATACTAGCT AACTAA AGCTAGTATTTTTATTTG TTATTTTTATTTAAT TERM 3864 3525653 - 3525694 + T 100 -17.8 -4.74052 | opp_overlap 3525653 3525663, overlap 3525650 3525663 CATACCTAATAAAAA CAAATAAAAATACTAGCT AACTAA AGCTAGTATTTTTATTTG TTATTTTTATTTAAT TERM 3865 3525684 - 3525663 - T 91 -7.4 -5.63012 | opp_overlap 3525663 3525653 3525650, overlap 3525653 AAAAACAAATAAAAA TACTAGCT AACTAA AGCTAGTA TTTTTATTTGTTATT TERM 3866 3525663 - 3525684 + T 91 -7.4 -5.52807 | opp_overlap 3525653 3525663, overlap 3525653 3525650 AAAAACAAATAAAAA TACTAGCT AACTAA AGCTAGTA TTTTTATTTGTTATT CD3036 3527215 - 3525860 - | proton-dependent oligopeptide transporter TERM 3867 3528246 - 3528230 - R 86 -5.3 -5.64304 | opp_overlap 3528230 3528237, overlap 3528223 TAATAGAATAAAAAA TTTAAAT TAA ATTTAAA AAAATTTGTTAAGTT TERM 3868 3528809 - 3528763 - R 80 -6.1 -5.11389 | opp_overlap 3528769 3528772, overlap 3528765 3528769 3528772 ACAACATAAATAAAA CTTAAATAAGATGGATTCTAT TCAAC ATAGTATCCATCTTATTCATT CAAAACCTAAAAGGA TERM 3869 3528807 - 3528765 - R 93 -13.1 -2.77009 | opp_overlap 3528769 3528772, overlap 3528763 3528769 3528772 AACATAAATAAAACT TAAATAAGATGGATTCTAT TCAAC ATAGTATCCATCTTATTCA TTCAAAACCTAAAAG TERM 3870 3528769 - 3528803 + r 95 -11.7 -3.34013 | opp_overlap 3528765 3528763 3528769 3528772, overlap 3528772 TAAATAAAACTTAAA TAAGATGGATTCTAT TCAAC ATAGTATCCATCTTA TTCATTCAAAACCTA TERM 3871 3528803 - 3528769 - R 100 -11.7 -4.02396 | opp_overlap 3528769 3528772, overlap 3528765 3528763 3528772 TAAATAAAACTTAAA TAAGATGGATTCTAT TCAAC ATAGTATCCATCTTA TTCATTCAAAACCTA TERM 3872 3528772 - 3528800 + r 79 -9 -3.81146 | opp_overlap 3528772 3528769 3528765 3528763, overlap 3528769 ATAAAACTTAAATAA GATGGATTCTAT TCAAC ATAGTATCCATC TTATTCATTCAAAAC TERM 3873 3528800 - 3528772 - R 82 -9 -4.0921 | opp_overlap 3528769 3528772, overlap 3528769 3528765 3528763 ATAAAACTTAAATAA GATGGATTCTAT TCAAC ATAGTATCCATC TTATTCATTCAAAAC TERM 3874 3529033 - 3529051 + r 78 -6.2 -5.07652 | ATCATTATTATTTTT TATATAAT TTA ATTATATA TTTTATTTTACCAAA CD3037 3529619 - 3529122 - | putative regulatory protein TERM 3875 3529681 - 3529647 - R 86 -3.8 -6.09888 | CCTTAATAAAAAAAA TAGTTTTGACAA CTAAATCCACC TTGCCAAAACTA TCTGCTATATATTAT TERM 3876 3529793 - 3529742 - R 81 -10.8 -2.6999 | gap 1, opp_overlap 3529756, overlap 3529756 GTAAAACTTATATTA TTAAAAT-TAAAAAATACATTAACC ATT GATTAATGTATTTTTTAGATTTTTA TAACAAGCATATCAA TERM 3877 3529778 - 3529756 - R 100 -8.6 -5.48054 | opp_overlap 3529756, overlap 3529742 ATTAAAATTAAAAAA TACATTAACC ATT GATTAATGTA TTTTTTAGATTTTTA TERM 3878 3529756 - 3529778 + r 87 -6.4 -5.30575 | opp_overlap 3529756 3529742 ATTAAAATTAAAAAA TACATTAACC ATT GATTAATGTA TTTTTTAGATTTTTA CD3038 3531251 - 3529842 - | hypothetical protein TERM 3879 3531205 - 3531219 + g 74 -7.2 -3.90987 | TTTATAATTTCACTT GCTTTA TTA TAAAGC TCTTTTGCTTGTTTA CD3039 3532385 - 3531255 - | hypothetical protein CD3040 3533200 - 3532397 - | hypothetical protein TERM 3880 3533545 - 3533555 + r 86 -5.4 -5.72616 | CTAAAAAGTTCATTT TGAG ACA CTCA TTTTTTTATATAAAT pepI 3534463 - 3533582 - | proline iminopeptidase TERM 3881 3533856 - 3533866 + g 76 -5.4 -5.17054 | overlap 3533862 CCTACAATATATGCT TCAG AAC CTGA TTTTTTAGGTCTTCT TERM 3882 3534623 - 3534649 + H 83 -6.9 -5.19212 | opp_overlap 3534623 3534628, overlap 3534628 3534647 ATACTAAACCAATTA TAAAATTATAT TAACT ATATAATTTTA TTTTTTAATAATAGT TERM 3883 3535363 - 3535338 - g 75 -7.1 -4.15222 | AGGTGTCTTAATAAA TATGTATATTC CAAC AAATATACATA AAATCCATGAAGTTC CD3042 3534919 - 3535893 + | hypothetical protein TERM 3884 3535972 - 3535950 - T 93 -9.9 -3.99878 | gap 1, opp_overlap 3535949 3535947 3535950 AGATATAATATTAAA TGCGCCC-CT AGTA AGAGGGCGCA ATGTTTATAACTTAT TERM 3885 3535950 - 3535972 + T 79 -9.9 -2.74604 | gap 1, opp_overlap 3535950, overlap 3535949 3535947 AGATATAATATTAAA TGCGCCC-CT AGTA AGAGGGCGCA ATGTTTATAACTTAT CD3043 3537070 - 3536009 - | hypothetical protein CD3044 3538530 - 3537679 - | putative phosphosugar-binding transcriptional regulator CD3045 3539467 - 3538547 - | putative acyl-CoA reductase/dehydratase TERM 3886 3538831 - 3538845 + g 77 -7.2 -4.3277 | CTTTTAAACATATCG TAGCAA ACT TTGCTA TTTCTATTCTATCTC murQ 3540491 - 3539577 - | N-acetylmuramic acid-6-phosphate etherase CD3047 3541668 - 3540571 - | hypothetical protein TERM 3887 3541230 - 3541246 + g 73 -3.7 -5.20222 | opp_overlap 3541229 3541232, overlap 3541232 TATGTGGATAAAAGT TATGACA TCC TGTCAAA TTTTCTTTATTTGGT TERM 3888 3541803 - 3541763 - R 100 -16 -3.00215 | opp_overlap 3541775, overlap 3541775 AAAGTTTCATATATA TTTATAAAAAAAGAAAAG TTTAC CTTTTCTTTTTTTATAAA CAATCAACAAAATAT TERM 3889 3541791 - 3541775 - R 84 -5.2 -5.65177 | opp_overlap 3541775, overlap 3541763 ATATTTATAAAAAAA GAAAAG TTTAC CTTTTC TTTTTTTATAAACAA TERM 3890 3541775 - 3541791 + r 79 -5.2 -5.60993 | opp_overlap 3541775 3541763 ATATTTATAAAAAAA GAAAAG TTTAC CTTTTC TTTTTTTATAAACAA CD3048 3543247 - 3541901 - | PTS system, IIC component CD3049 3543644 - 3543336 - | putative PTS system, IIB component TERM 3891 3543894 - 3543866 - R 95 -5.5 -6.04324 | TTAAAAAAGAAAAAA GACTATCTTAT TATTAAC ATAAAATAGTC TCAATACTTTTTTAA CD3050 3544214 - 3543906 - | hypothetical protein anmK 3545466 - 3544306 - | anhydro-N-acetylmuramic acid kinase TERM 3892 3545321 - 3545352 + g 71 -6.8 -3.90298 | overlap 3545341 TTTCTTATTTCGTCT TTTATATCTTTAGA AATT TCTAGAGTTATAAA TTCTATTTGCTTAAC TERM 3893 3545766 - 3545709 - R 73 -8.9 -2.86603 | opp_overlap 3545726, overlap 3545726 ACCATATTAAAATAG TTACTACAAATAAAAAACATACCAGGT ACCT ATCTGATATGTTTTTCATATATAATAA TTATTATTTTATAAT TERM 3894 3545749 - 3545726 - R 82 -4.6 -5.73978 | opp_overlap 3545726, overlap 3545709 ACTACAAATAAAAAA CATACCAGGT ACCT ATCTGATATG TTTTTCATATATAAT CD3053 3546916 - 3545897 - | two-component system sensor histidine kinase CD3054 3547590 - 3546910 - | two-component system response regulator TERM 3895 3547090 - 3547109 + g 74 -3 -5.43974 | overlap 3547085 3547105 AACCCTATTCTTATT TTTTAATA ATAA TGTTAAAA TTTTTATTTCGTTTT TERM 3896 3547719 - 3547695 - R 90 -10.1 -3.82604 | opp_overlap 3547695 TTAGTTAATCAACAA GGAGACTCTTA TTA CAAGAATCTCC TTTCTCTTTATTAAT TERM 3897 3547695 - 3547719 + r 77 -7.2 -4.46976 | opp_overlap 3547695 TTAGTTAATCAACAA GGAGACTCTT ATTAC AAGAATCTCC TTTCTCTTTATTAAT CD3055 3549649 - 3547742 - | putative ABC transporter, permease protein TERM 3898 3548842 - 3548862 + g 93 -4.2 -6.20267 | opp_overlap 3548842 3548844 TGTTTATTGCAATTA TATTATTT CCATT AAATAATA TTTTTTTATTTTTGA TERM 3899 3549056 - 3549066 + g 91 -5.4 -5.80727 | ATATATACCTATTCC TACC TTT GGTA TTTTTTCTTGTTTTT TERM 3900 3549200 - 3549182 - G 72 -9 -2.90054 | opp_overlap 3549180, overlap 3549184 GATTAAAGTAGCATA TAGTATAG CTT CTATACTA AGTCCATTAGATACC TERM 3901 3549456 - 3549446 - G 88 -4 -5.77734 | opp_overlap 3549446 3549449, overlap 3549449 AAAGAAAAATAAAAA TACT GAT AGTA TCATTATTACAGCTA CD3056 3550402 - 3549650 - | ABC transporter, ATP-binding protein TERM 3902 3550613 - 3550595 - R 87 -7.4 -5.22481 | opp_overlap 3550595 TATAAACAAAGAAAA GAAGCTCC TAA GAAGCCTC TAATCTATACAATTA CD3057 3551877 - 3550720 - | putative proton/sugar symporter CD3058 3552350 - 3551874 - | PTS system, IIA component CD3059 3552843 - 3552355 - | hypothetical protein TERM 3903 3552439 - 3552426 - G 77 -4.5 -5.18357 | opp_overlap 3552426 CAATTGAGGAAAAAA GAGCC TTAT AGCTC TTTCCCCATTGTAGT TERM 3904 3552568 - 3552585 + g 71 -4.9 -4.77778 | opp_overlap 3552568 TAATAAGACTAAATA GAAAGCA ATCA TGTTTTC TTTTATCTCTTTATT glvA 3554188 - 3552857 - | putative maltose-6'-phosphate glucosidase glvC 3555767 - 3554202 - | PTS system, IIBC component TERM 3905 3555508 - 3555521 + g 71 -6.7 -3.93166 | GCTAAAGCCTCCATA CAAGC TCTT GCTTG TTGCTTTTTTGCAAG TERM 3906 3555954 - 3555930 - R 86 -4.3 -5.93809 | overlap 3555933 TTCTCATAAAAAAAA GAATGACTACA ATT TGCAATCAATC CCTTCTGTAATCATT TERM 3907 3555951 - 3555933 - R 70 -4.6 -5.03409 | overlap 3555930 TCATAAAAAAAAGAA TGACTACA ATT TGCAATCA ATCCCTTCTGTAATC glvR 3556721 - 3555936 - | phosphosugar-binding transcriptional regulator CD3063 3558102 - 3556888 - | hypothetical protein xylA 3559946 - 3558609 - | xylose isomerase xylB 3561586 - 3560042 - | xylulose kinase TERM 3908 3560426 - 3560400 - G 76 -9.6 -2.78935 | opp_overlap 3560408, overlap 3560408 AGATTCTCTATTATA TCCATACAGTCT TTA AGACTATATGAA ACACCTTCCATTATT xylR 3561800 - 3562960 + | xylose repressor TERM 3909 3562992 - 3562956 - T 81 -9 -4.00348 | gap 1, opp_overlap 3562961, overlap 3562961 CTTTAATTAATGAAA TATAAGGGTTATGACTA TATA CAGCCATAACCCTT-TA AATTATACATTCTAA TERM 3910 3562988 - 3562961 - T 100 -11.4 -3.90901 | opp_overlap 3562961, overlap 3562956 ATTAATGAAATATAA GGGTTATGACTA TATA CAGCCATAACCC TTTAAATTATACATT TERM 3911 3562961 - 3562988 + T 76 -8.5 -3.81741 | opp_overlap 3562961 3562956 ATTAATGAAATATAA GGGTTATGACT ATATAC AGCCATAACCC TTTAAATTATACATT CD3067 3563520 - 3563116 - | PTS system, IIA component CD3068 3564023 - 3563541 - | PTS system, IIB component CD3069 3564852 - 3564043 - | PTS system, IID component CD3070 3565624 - 3564845 - | PTS system, IIC component CD3071 3567702 - 3565624 - | glycosyl hydrolase TERM 3912 3567317 - 3567345 + g 84 -9.1 -3.82218 | GGTCGATATTCTCTT GATTTTAACTTTA GAG TAGAGTTAAAGTC TTTGGTAATCTCAAT CD3072 3569022 - 3568501 - | hypothetical protein CD3073 3569188 - 3569754 + | hypothetical protein TERM 3913 3569799 - 3569820 + T 70 -7.5 -3.32836 | opp_overlap 3569798, overlap 3569798 3569804 AATGTTATAACAAGT TTATACAAA TATA TTTGTATAA TATCTTTGCTACTTT TERM 3914 3569898 - 3569948 + T 100 -13 -5.56263 | opp_overlap 3569898 3569917 ATTAATTTAATTAAA TACAACCTCTTAATATAAATTTAG ATT CTAAAATTATATCAAGAGGTTATA TTTTTATTTTATAAT TERM 3915 3569948 - 3569898 - T 100 -17.4 -3.96387 | opp_overlap 3569898, overlap 3569917 ATTAATTTAATTAAA TACAACCTCTTAATATAAATTTAG ATT CTAAAATTATATCAAGAGGTTATA TTTTTATTTTATAAT TERM 3916 3570046 - 3570066 + T 74 -8.5 -3.43364 | opp_overlap 3570045 3570046 3570048, overlap 3570044 ATCATTTTTTACAAG TATTTCTTA TAT TAAGAAATA TATTCTCATTTTCTA TERM 3917 3570213 - 3570251 + T 95 -12 -3.61988 | opp_overlap 3570214, overlap 3570209 3570214 3570219 CTCTTAAATATACAA ACTAAAGTAAGATATCTA CTA TAGACATCTTACTTTAGC TTCATTTATGAATAG TERM 3918 3570250 - 3570214 - T 100 -17.7 -4.27886 | opp_overlap 3570213 3570209 3570214 3570219 TCTTAAATATACAAA CTAAAGTAAGATATCTA CTA TAGACATCTTACTTTAG CTTCATTTATGAATA TERM 3919 3570214 - 3570250 + T 100 -15.5 -2.76711 | opp_overlap 3570214, overlap 3570213 3570209 3570219 TCTTAAATATACAAA CTAAAGTAAGATATCTA CTA TAGACATCTTACTTTAG CTTCATTTATGAATA TERM 3920 3570219 - 3570245 + T 86 -9.6 -3.83816 | opp_overlap 3570214, overlap 3570214 3570213 3570209 AATATACAAACTAAA GTAAGATATCTA CTA TAGACATCTTAC TTTAGCTTCATTTAT gatY 3571145 - 3570276 - | tagatose-bisphosphate aldolase tagT 3573081 - 3571165 - | PTS system, IIABC component tagK 3574004 - 3573084 - | putative tagatose (1)-phosphate-kinase TERM 3921 3573650 - 3573662 + g 83 -3.4 -5.67529 | ATGACTGTATCTTAT CTAG CATAT CTAG TTTTTGTTTTTCATT TERM 3922 3574053 - 3574097 + r 72 -6.2 -4.40221 | gap 2, opp_overlap 3574053 CATTATAATAAAAAA GTCTATGAAAATC--TTTTC ACAAATA GAAAATCGATTTTCATAGAC TTTTCAATTTAATTT TERM 3923 3574097 - 3574053 - R 88 -6.6 -5.58179 | opp_overlap 3574053 CATTATAATAAAAAA GTCTATGAAAATCTTTTCAC AAATA GAAAATCGATTTTCATAGAC TTTTCAATTTAATTT CD3077 3574858 - 3574106 - | phosphosugar-binding transcriptional regulator TERM 3924 3575080 - 3575044 - R 100 -16.2 -5.06816 | opp_overlap 3575044 ATTTTGTAATAAAAA TTGGAGTTACTCAATT ACTGA AACTGAGTAACTCCAA TTTTTACGACCTCAA TERM 3925 3575044 - 3575080 + r 100 -14 -4.58395 | opp_overlap 3575044 ATTTTGTAATAAAAA TTGGAGTTACTCAATT ACTGA AACTGAGTAACTCCAA TTTTTACGACCTCAA CD3078 3575771 - 3575154 - | hypothetical protein TERM 3926 3575851 - 3575800 - R 100 -15 -2.8474 | gap 1, opp_overlap 3575800, overlap 3575803 CCTTATTTATAATTA TAATCCCTCTTATAAA-ACTGTATT AAT AACATAGTATTTATAAGAGGGATTA TTTATATTTAAAAAC TERM 3927 3575800 - 3575851 + r 100 -15 -4.32857 | gap 1, opp_overlap 3575800 3575803 CCTTATTTATAATTA TAATCCCTCTTATAAA-ACTGTATT AAT AACATAGTATTTATAAGAGGGATTA TTTATATTTAAAAAC TERM 3928 3575848 - 3575803 - R 95 -12.3 -3.57039 | gap 1, opp_overlap 3575800, overlap 3575800 TATTTATAATTATAA TCCCTCTTATAAA-ACTGTATT AAT AACATAGTATTTATAAGAGGGA TTATTTATATTTAAA ascB 3577315 - 3575870 - | 6-phospho-beta-glucosidase CD3080 3577690 - 3577337 - | PTS system, IIA component CD3081 3578951 - 3577719 - | PTS system, IIC component CD3082 3579291 - 3578974 - | PTS system, IIB component CD3083 3579533 - 3581446 + | transcription antiterminator garK 3582723 - 3581569 - | glycerate kinase CD3085 3585617 - 3583002 - | alpha-mannosidase hrsA 3587686 - 3585761 - | 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC TERM 3929 3586425 - 3586447 + g 73 -8.4 -3.38535 | opp_overlap 3586424 3586425, overlap 3586424 CAAAAACTTACGAAT CCAGCTAATG TGC CTTTGGCTGG TATATTCTTCTTTAA TERM 3930 3586554 - 3586570 + g 83 -7.9 -4.63527 | opp_overlap 3586553 3586554 AGACCTGCTGCAAAT CCTGGTC CAA GACCTGG TTTTTCAGCTAGTGA TERM 3931 3587448 - 3587461 + g 79 -8.1 -3.97331 | GTCTCTAAGGTCATA GCTGC AAAT GCAGC TTCTTTAACTGACTT TERM 3932 3587818 - 3587787 - R 100 -12.6 -5.00616 | opp_overlap 3587791 3587793, overlap 3587791 TTTCTTCTTAAAAAA TAAAGATTTGTGTA TTTA TACACAAATCTCTA TCTTAACCAGTATTG TERM 3933 3587814 - 3587791 - R 100 -11.2 -5.04249 | opp_overlap 3587791 3587793, overlap 3587787 TTCTTAAAAAATAAA GATTTGTGTA TTTA TACACAAATC TCTATCTTAACCAGT TERM 3934 3587791 - 3587814 + r 87 -11.2 -3.09452 | opp_overlap 3587791 3587787, overlap 3587793 TTCTTAAAAAATAAA GATTTGTGTA TTTA TACACAAATC TCTATCTTAACCAGT CD3087 3588541 - 3587816 - | phosphosugar-binding transcriptional regulator TERM 3935 3588688 - 3588736 + r 100 -11.3 -5.41143 | opp_overlap 3588735 AATGTGTACTTCCTA TATTGATAGAGATGATTCAAGTT TTT ATTTTGATACATCTCTATCAATA TTTTTTTAGAAAATA CD3088 3589574 - 3588804 - | putative cellobiose-phosphate degrading protein CD3089 3591003 - 3589576 - | PTS system, IIABC component treR 3591394 - 3592116 + | GntR family transcriptional regulator TERM 3936 3592122 - 3592141 + F 88 -6.6 -5.58209 | opp_overlap 3592122 AAGATATTAAAAAAA TTATGTTT AATT AAACATAA TTTTTTTACGTTTAG TERM 3937 3592141 - 3592122 - f 88 -6.6 -5.62219 | opp_overlap 3592122 AAGATATTAAAAAAA TTATGTTT AATT AAACATAA TTTTTTTACGTTTAG treA 3592313 - 3593980 + | trehalose-6-phosphate hydrolase TERM 3938 3593991 - 3594031 + T 81 -10.8 -2.53382 | gap 1, opp_overlap 3593998 3594000, overlap 3593998 3594000 AATAAAGTTATTTAT GTAAAAATCGGTATAACAC CCTG GTGTTATACC-AATTTTAC TAAATTCAAAGTAAT TERM 3939 3593998 - 3594025 + T 95 -10 -4.30978 | opp_overlap 3593998 3594000, overlap 3593991 3594000 TTATTTATGTAAAAA TCGGTATAACAC CCTG GTGTTATACCAA TTTTACTAAATTCAA TERM 3940 3594025 - 3593998 - T 100 -12.2 -4.67353 | opp_overlap 3593991 3593998 3594000, overlap 3594000 TTATTTATGTAAAAA TCGGTATAACAC CCTG GTGTTATACCAA TTTTACTAAATTCAA TERM 3941 3594023 - 3594000 - T 90 -12.6 -2.63476 | opp_overlap 3593998 3593991 3594000, overlap 3593998 ATTTATGTAAAAATC GGTATAACAC CCTG GTGTTATACC AATTTTACTAAATTC TERM 3942 3594000 - 3594023 + T 89 -12.6 -2.50381 | opp_overlap 3594000 3593998, overlap 3593998 3593991 ATTTATGTAAAAATC GGTATAACAC CCTG GTGTTATACC AATTTTACTAAATTC CD3092 3595416 - 3594076 - | putative amino acid permease CD3093 3596182 - 3595436 - | putative glutamine amidotransferase TERM 3943 3596239 - 3596212 - R 100 -10.8 -5.64873 | gap 1 GTGAACAATAAAAAA TGCTACTT-CTCT TAA AGAGCAAGTAGCA TACCAAGATTTTATT CD3094 3598435 - 3596426 - | putative sigma-54-dependent transcriptional regulator TERM 3944 3598815 - 3598761 - R 100 -14 -3.76224 | opp_overlap 3598775 3598777 3598802, overlap 3598775 CTTTTACCTATTAAA TGCATTATAAAAAAGATGGAATAACG ATT CGTTACTCCACCTTTTTTGTAATAAA AAATTGTATATATAA TERM 3945 3598801 - 3598775 - R 100 -12.4 -5.31877 | opp_overlap 3598775 3598777, overlap 3598761 ATGCATTATAAAAAA GATGGAATAACG ATT CGTTACTCCACC TTTTTTGTAATAAAA TERM 3946 3598775 - 3598801 + r 100 -8 -5.31275 | opp_overlap 3598761 3598775, overlap 3598777 ATGCATTATAAAAAA GATGGAATAACG ATT CGTTACTCCACC TTTTTTGTAATAAAA TERM 3947 3598777 - 3598799 + r 76 -9.2 -2.86102 | opp_overlap 3598775 3598761, overlap 3598775 GCATTATAAAAAAGA TGGAATAACG ATT CGTTACTCCA CCTTTTTTGTAATAA bglA1 3600306 - 3598873 - | 6-phospho-beta-glucosidase ascB1 3601746 - 3600322 - | 6-phospho-beta-glucosidase CD3097 3603749 - 3601833 - | PTS system, IIABC component TERM 3948 3603834 - 3603822 - R 70 -6.3 -4.21343 | opp_overlap 3603821 3603822 CCCAATATATATAAA CCTAA TTA TTAGG ATTTATATCTGACTT bglG1 3604683 - 3603823 - | transcription antiterminator TERM 3949 3605000 - 3605024 + r 79 -10.2 -2.72235 | opp_overlap 3605000, overlap 3604999 3604998 AAACAAAATAAAAAA GGTATTACTT TCTTT AAGTAATACC CATTTATTTTTAATT TERM 3950 3605024 - 3605000 - R 100 -10.2 -5.95449 | opp_overlap 3604999 3604998 3605000 AAACAAAATAAAAAA GGTATTACTT TCTTT AAGTAATACC CATTTATTTTTAATT CD3099 3606221 - 3605034 - | putative amidohydrolase CD3100 3607641 - 3606235 - | putative C4-dicarboxylate anaerobic carrier TERM 3951 3606380 - 3606366 - G 70 -5.7 -4.25104 | opp_overlap 3606366 GTGCTCCCATTAAAA CACCT GATGT AGGTG TTATCAAGTTAGTTA TERM 3952 3607726 - 3607703 - R 100 -14 -5.14477 | opp_overlap 3607699 TATAGATGTAAAAAA GCTCAACATG GATA CATGTTGAGC TAAATGTGCTAAATA TERM 3953 3608216 - 3608178 - R 100 -9.3 -5.55769 | gap 1, opp_overlap 3608183, overlap 3608183 CTTTATAATAAAAAA TA-AAAGCTATGTAAACT TATC AATTTACATAGCTTTATA TACATTAATCTACTC TERM 3954 3608210 - 3608183 - R 100 -10.8 -5.55001 | opp_overlap 3608183, overlap 3608178 TAATAAAAAATAAAA GCTATGTAAACT TATC AATTTACATAGC TTTATATACATTAAT TERM 3955 3608183 - 3608210 + r 79 -8.6 -4.09509 | opp_overlap 3608183 3608178 TAATAAAAAATAAAA GCTATGTAAACT TATC AATTTACATAGC TTTATATACATTAAT CD3101 3609873 - 3608221 - | PTS system, IIBC component CD3102 3611296 - 3609893 - | putative dipeptidase TERM 3956 3611559 - 3611524 - R 95 -11.4 -3.66769 | opp_overlap 3611532, overlap 3611532 ATTCCAAAAAATACA TAAAAAAAGATGTAGC CTTA GCTACATCTTCTTATA TCTATTCAACTTCCA TERM 3957 3611532 - 3611551 + r 95 -10.8 -3.9679 | opp_overlap 3611524 3611532 AAATACATAAAAAAA GATGTAGC CTTA GCTACATC TTCTTATATCTATTC TERM 3958 3611551 - 3611532 - R 100 -10.8 -5.82281 | opp_overlap 3611532, overlap 3611524 AAATACATAAAAAAA GATGTAGC CTTA GCTACATC TTCTTATATCTATTC CD3103 3612052 - 3611561 - | putative PTS syste, IIA component CD3104 3612899 - 3612078 - | putative hydrolase CD3105 3614054 - 3612903 - | alcohol dehydrogenase TERM 3959 3613260 - 3613272 + g 72 -7.7 -3.5764 | TAGTGGATGTGGTGC TGCTG CTC CAGCA TTTGCCAGTGAACTT TERM 3960 3613475 - 3613456 - G 72 -6.5 -4.31692 | opp_overlap 3613454 3613456 3613466 AATGCATGAGTAAAA GCATCAA ATGCTG TTGATGC AGTAATTCTCTCTGG CD3106 3614324 - 3614965 + | putative phopho-sugar aldolase TERM 3961 3615706 - 3615674 - g 75 -7.4 -4.10164 | gap 1, opp_overlap 3615673 3615684 TGAGTATTATATAAA CTTCTTAATACATAT AGCT ATATGTATTAA-AAG AATTTCAATTAAAAG CD3107 3614991 - 3616535 + | putative transcription antiterminator TERM 3962 3616543 - 3616572 + T 75 -5.8 -4.93365 | opp_overlap 3616543 ATAAATAAACAAAAA TAGGCTTGTCTC AACATA GAGATAAACCTA TTTTTCATTGTCCAA TERM 3963 3616572 - 3616543 - T 82 -5.8 -5.56573 | opp_overlap 3616543 ATAAATAAACAAAAA TAGGCTTGTCTC AACATA GAGATAAACCTA TTTTTCATTGTCCAA CD3108 3617361 - 3616735 - | hypothetical protein TERM 3964 3617471 - 3617446 - R 90 -9.9 -3.75115 | opp_overlap 3617444 3617446, overlap 3617442 TTTTCATAAAATTAA TGCTTCCTTAA AACA TTAAGAAAGCA TCTCTTTTATCATAG TERM 3965 3617446 - 3617471 + r 72 -7.7 -3.50302 | opp_overlap 3617442 3617446, overlap 3617444 TTTTCATAAAATTAA TGCTTCCTTAA AACA TTAAGAAAGCA TCTCTTTTATCATAG CD3109 3618212 - 3617496 - | putative pentose-5-phosphate 3-epimerase TERM 3966 3618730 - 3618718 - g 85 -4.9 -5.53991 | opp_overlap 3618718 3618729 TATTTATGAAAAAAA TTTAG AAA CTAAA TACTTTGATAAAGTA CD3110 3618638 - 3619852 + | 6-phosphofructokinase CD3111 3620470 - 3621798 + | hypothetical protein TERM 3967 3621860 - 3621900 + T 76 -9.3 -2.88215 | opp_overlap 3621855 3621865, overlap 3621855 3621858 3621865 TTATATATGACTTTC TAAAAGGTATATCTTTGCA TCT TTTTAAGATATACCTTTTA TGATATTTAATAATA CD3112 3623126 - 3621936 - | putative amidohydrolase CD3113 3624611 - 3623232 - | putative amidohydrolase CD3114 3625850 - 3624642 - | hypothetical protein bglA2 3628329 - 3626875 - | 6-phospho-beta-glucosidase BglA TERM 3968 3627343 - 3627358 + g 75 -4.8 -5.09259 | opp_overlap 3627341 3627343 CCCACCAAATAAAGA TTTATC ACCT GATAAA TTTTCTTTTGGAGTA bglF 3630220 - 3628349 - | PTS system, beta-glucoside-specific IIABC component TERM 3969 3629266 - 3629251 - G 72 -4.7 -4.88736 | opp_overlap 3629249 3629251, overlap 3629253 CAGCACCCATAAAAA TTGGG TCATAC CCCAA TGTTGTCACAGAATT bglG 3631070 - 3630210 - | putative beta-glucoside bgl operon transcription antiterminator TERM 3970 3631150 - 3631093 - R 100 -8.8 -5.06414 | opp_overlap 3631096 3631112 TCCCTTCAATAAAAA GAACTCAAGCATATATGTATAGAGTA TCCCTC TATTTTTCACATATATACTTGAGTTC TGCCTGCTAATCAGT CD3118 3632273 - 3631869 - | hypothetical protein TERM 3971 3632358 - 3632326 - R 100 -9.4 -5.54894 | opp_overlap 3632325 AATGCACTAAAAAAA GGATGTTATCTTTT TTATT AAAATATAACATCC CTCATATTTAGCATC CD3119 3633652 - 3632465 - | putative glycosyltransferase TERM 3972 3633055 - 3633073 + g 70 -6 -4.30909 | opp_overlap 3633054 ACTTACTAGAGAAGG TTTCTACC ATT GGTTGAAA TTCTTTTGATGTATA TERM 3973 3633161 - 3633171 + g 85 -2.6 -5.84381 | overlap 3633156 ATACCCTTTTCTTTG TAAA AGC TTTA TTTTTTTATTAATGC TERM 3974 3633331 - 3633294 - G 73 -8.7 -3.14839 | opp_overlap 3633298, overlap 3633292 3633298 CATACATATGGAATA TTAAGTTTTTGTGCAAA TAAC TTTCCCCAAAAACTTAA TGAATCTGATACAAT TERM 3975 3633414 - 3633400 - G 79 -7.2 -4.46112 | opp_overlap 3633400 3633402 TTTCATCTAAAGAAA TAGTAG TAT CTACTA TCATCTCAATTAATC CD3120 3634118 - 3633684 - | putative transcriptional regulator CD3120A 3634395 - 3634237 - | hypothetical protein CD3121 3634567 - 3635316 + | putative flavodoxin CD3122 3635847 - 3635482 - | transcription regulator ArsR CD3123 3636645 - 3635863 - | putative nitroreductase TERM 3976 3636827 - 3636803 - R 100 -10.1 -5.62045 | opp_overlap 3636803 3636805 ATACATAATAAAAAA GACAAGCTTAA AAC CTAAGCTTGCC TTTTTCATCTTTTAT TERM 3977 3636803 - 3636827 + r 83 -7.2 -4.99972 | opp_overlap 3636803, overlap 3636805 ATACATAATAAAAAA GACAAGCTTA AAACC TAAGCTTGCC TTTTTCATCTTTTAT ascB2 3638483 - 3637050 - | 6-phospho-beta-glucosidase CD3125 3640466 - 3638538 - | PTS system, IIABC component bglG2 3641474 - 3640611 - | transcription antiterminator CD3127 3643170 - 3641770 - | PTS system, IIABC component pgmB 3643880 - 3643209 - | beta-phosphoglucomutase CD3129 3646272 - 3643882 - | putative glycosyl hydrolase acsB3 3647746 - 3646298 - | putative 6-phospho-beta-glucosidase CD3131 3649038 - 3648151 - | AraC family transcription regulator TERM 3978 3648207 - 3648221 + g 82 -4.2 -5.65927 | overlap 3648208 TTTTTTTAAATTCTA ATGGAG AGA CTCCAA TTTTTTCTTTAAATA TERM 3979 3648208 - 3648220 + g 76 -7.7 -3.9793 | overlap 3648207 TTTTTTAAATTCTAA TGGAG AGA CTCCA ATTTTTTCTTTAAAT TERM 3980 3648342 - 3648362 + g 70 -4.1 -4.91573 | TTTCTAATCTATATT CATTTAAAA AAG TTATAAATG TTTTTCCTGTATTTT CD3132 3649587 - 3649138 - | PTS system, IIA component CD3133 3651484 - 3649577 - | transcription antiterminator TERM 3981 3651695 - 3651652 - R 100 -8.4 -5.46706 | opp_overlap 3651653 3651656, overlap 3651653 3651656 ATTTCAAAATAAAAA TTAAGGATATTTAGAAGTAG TTAA CTGATTCTAAATATCCTTAT TATTATTCTATATAC TERM 3982 3651694 - 3651653 - R 100 -11.9 -3.86397 | opp_overlap 3651653 3651656, overlap 3651652 3651656 TTTCAAAATAAAAAT TAAGGATATTTAGAAGTAG TTAA CTGATTCTAAATATCCTTA TTATTATTCTATATA TERM 3983 3651653 - 3651694 + r 100 -14.1 -4.0847 | opp_overlap 3651653 3651652 3651656, overlap 3651656 TTTCAAAATAAAAAT TAAGGATATTTAGAAGTAG TTAA CTGATTCTAAATATCCTTA TTATTATTCTATATA TERM 3984 3651656 - 3651691 + r 100 -11.4 -4.14147 | opp_overlap 3651653 3651652 3651656, overlap 3651653 CAAAATAAAAATTAA GGATATTTAGAAGTAG TTAA CTGATTCTAAATATCC TTATTATTATTCTAT TERM 3985 3651691 - 3651656 - R 86 -9.2 -4.02606 | opp_overlap 3651656 3651653, overlap 3651653 3651652 CAAAATAAAAATTAA GGATATTTAGAAGTAG TTAA CTGATTCTAAATATCC TTATTATTATTCTAT CD3134 3653647 - 3651752 - | PTS system, IIABC component TERM 3986 3652552 - 3652536 - G 74 -6.5 -4.40572 | opp_overlap 3652543 3652546, overlap 3652525 3652548 ATAACTGCCATAAAA CCAGCTA TCA TAGCAGG AGCAAATCCTTGTCT CD3135 3654561 - 3653683 - | hypothetical protein TERM 3987 3654511 - 3654499 - G 74 -7.7 -3.83205 | opp_overlap 3654498 3654502 ACTTCCTATATTAAA TGCTG GTA CAGCA AATTGATTTTCTTGT TERM 3988 3654674 - 3654729 + r 77 -6.4 -4.61231 | overlap 3654677 3654678 AAAATAACAATCGTT TTCCTTAGTGAAAAGGAACTTTTATT ATAC ACTCTAAGTTCCTTTTCACTAAATAA TTTTTAGAAGTCTGC TERM 3989 3654677 - 3654726 + r 72 -8.1 -3.24422 | overlap 3654674 3654678 ATAACAATCGTTTTC CTTAGTGAAAAGGAACTTTTATT ATAC ACTCTAAGTTCCTTTTCACTAAA TAATTTTTAGAAGTC TERM 3990 3654678 - 3654725 + r 85 -11.6 -2.54171 | overlap 3654677 3654674 TAACAATCGTTTTCC TTAGTGAAAAGGAACTTTTATT ATAC ACTCTAAGTTCCTTTTCACTAA ATAATTTTTAGAAGT TERM 3991 3655156 - 3655179 + r 100 -11.2 -4.33165 | opp_overlap 3655156 TTTTTAATAAAAAAA GATATTGACT AAAT AGTCAATATC TTTTAGTGGATTTAA TERM 3992 3655179 - 3655156 - R 100 -11.2 -5.7946 | opp_overlap 3655156 TTTTTAATAAAAAAA GATATTGACT AAAT AGTCAATATC TTTTAGTGGATTTAA bglA3 3656699 - 3655266 - | 6-phospho-beta-glucosidase TERM 3993 3655794 - 3655807 + g 80 -2.4 -5.82172 | AATAAAATCAACTAT TCCT TCTTTT AGGA TTTTTTTATCTTCCT CD3137 3658563 - 3656722 - | PTS system, IIABC component TERM 3994 3657155 - 3657169 + g 72 -8.6 -2.9039 | TGTAAGCCTTCTATT GGAGAT AAT ATCTCC TCTATACCATCATCT TERM 3995 3657702 - 3657716 + g 76 -8.6 -3.38609 | GCATAGCTATACCTA TTGCAG CTC CTGCAA TTACTCTGTTAAATT TERM 3996 3658656 - 3658605 - R 71 -6.9 -4.06182 | TTATGTATAAAAATA GACCTAAATCAATACAATTAGAT ATTAAA AACTAATTATACCAACTTAGGTC ATGCCTGCCAAACAG CD3138 3659522 - 3658689 - | transcription antiterminator TERM 3997 3658767 - 3658779 + g 76 -2.7 -5.62552 | TTTCCATTTATACGT CTTTT CAA GAAAG TTTTTTACTTTTTTT CD3139 3660766 - 3660566 - | putative transcriptional regulator CD3140 3661195 - 3660779 - | hypothetical protein CD3141 3661678 - 3661265 - | hypothetical protein TERM 3998 3661698 - 3661736 + r 100 -15.1 -4.1196 | opp_overlap 3661698 AATCACCCCTTAAAA GTTATATATTTATAACA CCTTA TGTTATAAATATATAAC TTTTCCAAATAAATT TERM 3999 3661736 - 3661698 - R 100 -15.8 -4.10429 | opp_overlap 3661698 AATCACCCCTTAAAA GTTATATATTTATAACAC CTT ATGTTATAAATATATAAC TTTTCCAAATAAATT TERM 4000 3662035 - 3662014 - R 88 -5.2 -5.96894 | opp_overlap 3662014 3662016, overlap 3662016 ACTGAAATAAAAAAA CACTAGTC AATAAA GACTAGTA TTTTCAAGTATTTTA TERM 4001 3662033 - 3662016 - R 71 -5.6 -4.61687 | opp_overlap 3662014 3662016, overlap 3662014 TGAAATAAAAAAACA CTAGTC AATAAA GACTAG TATTTTCAAGTATTT CD3143 3663141 - 3662512 - | hypothetical protein TERM 4002 3662629 - 3662613 - G 85 -8.1 -4.37991 | opp_overlap 3662612 CAAAAACATCTAAAA GTTTCAA TAC TTGAAAC GTAAATTCCAACGGA TERM 4003 3663219 - 3663187 - R 100 -10.1 -4.55491 | opp_overlap 3663182 3663187 3663190, overlap 3663179 TATCTAATTATAAAA TAACTTAACTGAC ATATTCA GTCAGTTAAGCTA TTAAATTTGATAATA TERM 4004 3663187 - 3663219 + r 70 -7.9 -3.31415 | opp_overlap 3663179 3663187, overlap 3663182 3663190 TATCTAATTATAAAA TAACTTAACTGAC ATATTCA GTCAGTTAAGCTA TTAAATTTGATAATA TERM 4005 3663190 - 3663216 + r 75 -9.6 -2.52602 | opp_overlap 3663187, overlap 3663187 3663182 CTAATTATAAAATAA CTTAACTGAC ATATTCA GTCAGTTAAG CTATTAAATTTGATA CD3144 3664182 - 3663220 - | putative transcriptional regulator TERM 4006 3663901 - 3663912 + g 72 -4.4 -5.02074 | overlap 3663891 TAATGCTTCGTCTAA GAAG TATC CTTC TTTTTTAGCAAATAG TERM 4007 3664205 - 3664227 + r 80 -6.5 -4.97312 | opp_overlap 3664215, overlap 3664209 CACCTCTTTCTATTT GTTATATAA AGTTA TTATATAAC TTTTTGATTGATTTT TERM 4008 3664850 - 3664895 + r 78 -9.4 -3.06265 | opp_overlap 3664851, overlap 3664845 AAGTTAAATACAAAA ATGACTATAAATAGATTTTT ATTTAC ACAAATCTATTTATAGTCAC TATAGTTTATCCAAT TERM 4009 3664894 - 3664851 - R 100 -13.6 -5.20783 | opp_overlap 3664850 3664845 AGTTAAATACAAAAA TGACTATAAATAGATTTTTA TTTA CACAAATCTATTTATAGTCA CTATAGTTTATCCAA CD3145 3668516 - 3664944 - | putative serine-aspartate-rich surface anchored fibrinogen-binding protein TERM 4010 3667655 - 3667678 + g 76 -6.1 -4.58395 | TTAACTTGTCTCCAT TTTCTAGAG TTACAT CTCTAGGAA TTTTTCCACCCTCAG CD3146A 3669925 - 3670135 + | putative transposase (partial) TERM 4011 3670295 - 3670254 - T 100 -7.5 -5.66868 | gap 1 AAGCAAGTAAAAAAA GAACTGTCGCAC-AGCAATT TAA AATTACTCATTCGACAGTCC TTATTTCGTGGATTA CD3147 3671982 - 3670357 - | putative DNA-methyltransferase CD3148 3672294 - 3674912 + | hypothetical protein TERM 4012 3675609 - 3675584 - g 82 -6.3 -5.2422 | opp_overlap 3675585, overlap 3675585 3675598 AACTATATTAAAAAA CCTATATCTAA AGAT TTAGATATAGT TTTATCTAAAAGAAT TERM 4013 3675585 - 3675608 + G 100 -9.8 -4.52589 | opp_overlap 3675584 3675585 3675598 ACTATATTAAAAAAC CTATATCTAA AGAT TTAGATATAG TTTTATCTAAAAGAA TERM 4014 3675608 - 3675585 - g 86 -9.8 -3.72905 | opp_overlap 3675585, overlap 3675584 3675598 ACTATATTAAAAAAC CTATATCTAA AGAT TTAGATATAG TTTTATCTAAAAGAA TERM 4015 3677141 - 3677153 + G 70 -6.3 -4.07535 | opp_overlap 3677141 GAGTTAATAATTCAA GATGA GCT TCATC TTATTTCTGGACCTT CD3149 3674930 - 3678457 + | putative DNA helicase CD3150 3678459 - 3680372 + | hypothetical protein TERM 4016 3680369 - 3680382 + T 79 -3.9 -5.76237 | AAATCTAATTTTAAT TTAGT AATA ACTAA TTTTTTATTTATATA TERM 4017 3680399 - 3680438 + T 85 -5.9 -5.56264 | opp_overlap 3680399 TTTTTATTTATATAA CTAAAGGTTAAAAGTTA ATTTTA TGACTTCTATCCTTTAG TTTTTTGTATTTAAA TERM 4018 3680616 - 3680593 - T 79 -4 -5.79595 | opp_overlap 3680571, overlap 3680571 TTTCAAAATAAAAAA CATATTAACT ATTA AATCAATATG TTTTCGTGGATTCCA CD3151 3681827 - 3681078 - | hypothetical protein CD3152 3682157 - 3681843 - | hypothetical protein TERM 4019 3681928 - 3681942 + g 76 -6.4 -4.62336 | opp_overlap 3681928 TTATTTATCCATATA CAAGGG AAT CCTTTG TTTTTAGAATGACAT CD3152A 3682361 - 3682161 - | putative phage transcriptional regulator CD3153 3682508 - 3683269 + | putative phage DNA-binding protein CD3154 3683521 - 3684012 + | putative phage repressor CD3155 3684086 - 3684856 + | hypothetical protein TERM 4020 3685308 - 3685282 - g 76 -6.6 -4.38313 | opp_overlap 3685282 3685282 ACACTAAACTGAAAA CCTGCTTATCAG AAG CTGAAAAACAAG GTCTTATACAACGTA CD3156 3684846 - 3686012 + | phage integrase TERM 4021 3686111 - 3686061 - T 83 -7.9 -4.55491 | opp_overlap 3686062 3686067 3686070, overlap 3686062 3686067 TAGTTAATTACAAAA TCAAAATAAGGATACAAATTAAT TTTAT ATTATATTGTATCCTTATTTCGT ATCTAGTTTTAATTA TERM 4022 3686110 - 3686062 - T 93 -11.4 -3.32572 | opp_overlap 3686062 3686067 3686070, overlap 3686061 3686067 AGTTAATTACAAAAT CAAAATAAGGATACAAATTAAT TTTAT ATTATATTGTATCCTTATTTCG TATCTAGTTTTAATT TERM 4023 3686062 - 3686110 + T 80 -9.2 -3.12207 | opp_overlap 3686062 3686061 3686067, overlap 3686067 3686070 AGTTAATTACAAAAT CAAAATAAGGATACAAATTAAT TTTAT ATTATATTGTATCCTTATTTCG TATCTAGTTTTAATT TERM 4024 3686105 - 3686067 - T 86 -7.7 -4.74012 | opp_overlap 3686062 3686067 3686070, overlap 3686062 3686061 ATTACAAAATCAAAA TAAGGATACAAATTAAT TTTAT ATTATATTGTATCCTTA TTTCGTATCTAGTTT TERM 4025 3686067 - 3686105 + T 75 -7.7 -3.9163 | opp_overlap 3686067 3686062 3686061, overlap 3686062 3686070 ATTACAAAATCAAAA TAAGGATACAAATTAAT TTTAT ATTATATTGTATCCTTA TTTCGTATCTAGTTT CD3156B 3687069 - 3686842 - | hypothetical protein TERM 4026 3687355 - 3687334 - R 93 -7.4 -5.79595 | opp_overlap 3687334 CTCCAAAATAAAAAA TACTAGTC AACAAA GACTAGTA TTTCCAAGTATTTCA smpB 3688387 - 3687896 - | SsrA-binding protein CD3158 3688992 - 3689819 + | hypothetical protein TERM 4027 3690719 - 3690709 - f 78 -5.4 -5.13741 | TGAATCCAATAAAAA GTAC AGG GTAC AAGAATTGTTAGTAA TERM 4028 3690936 - 3690924 - g 73 -9.1 -2.66335 | overlap 3690920 3690921 3690917 TCAATATACAATCTA CCTCC ATG GGAGG AAATTAAAAAGAAGA CD3159 3690834 - 3691298 + | putative acetyltransferase TERM 4029 3691357 - 3691346 - T 80 -3 -6.11229 | ATTAAAATAAAAAAA TACA TATG TGTA GGTCATAGCAATAAG CD3160 3692119 - 3691565 - | putative ABC transporter, permease protein CD3161 3693428 - 3692139 - | putative ABC transporter, permease permease CD3162 3694297 - 3693425 - | ABC transporter, ATP-binding protein CD3163 3695318 - 3694827 - | hypothetical protein TERM 4030 3695841 - 3695809 - R 82 -4.4 -5.64421 | gap 1, opp_overlap 3695797 3695809 ATCTTAAATAAAAAA TAAGTGTATC-TTAA ATTT TAAATGATACACTTA TTTTTATATTGAAAT TERM 4031 3695809 - 3695841 + r 73 -4.4 -5.09762 | gap 1, opp_overlap 3695809, overlap 3695797 ATCTTAAATAAAAAA TAAGTGTATC-TTAA ATTT TAAATGATACACTTA TTTTTATATTGAAAT rnr 3698203 - 3696068 - | ribonuclease R TERM 4032 3698684 - 3698717 + H 93 -9.2 -4.57474 | gap 1, opp_overlap 3698688, overlap 3698688 TATTTATGCTAGTAC TAAAGACTTG-CAAA CGTTT TTTGACAAGTCTTTA TTTTGTCTAAATTAA TERM 4033 3698688 - 3698713 + H 73 -5.6 -4.83243 | gap 1, opp_overlap 3698688, overlap 3698684 TATGCTAGTACTAAA GACTTG-CAAA CGTTT TTTGACAAGTC TTTATTTTGTCTAAA TERM 4034 3699340 - 3699330 - g 82 -4 -5.53991 | GATTTAGTAAAAAAA GAAT TAG ATTC ATGGGATATATCAAA CD3165 3698796 - 3699410 + | hypothetical protein TERM 4035 3699556 - 3699532 - g 70 -8.7 -2.54812 | overlap 3699531 ACGCATAGGACCAAC TTCCTTATCAA AAC TTGAAAAGGAA ATCAATGGTATTAAT CD3166 3699428 - 3699790 + | putative transcriptional regulator CD3167 3699896 - 3700393 + | putative phosphatidylethanolamine-binding regulatory protein TERM 4036 3700404 - 3700452 + F 100 -14.3 -3.96469 | opp_overlap 3700408 3700413 3700420, overlap 3700408 ATTAATTAGGTTGAC TATAGCTAATCATTAATTAAATG CTA CATTTAATTGATGATTAGCTTAA TTGTTATTAGAATAT TERM 4037 3700408 - 3700448 + F 100 -19.5 -3.62255 | opp_overlap 3700408 3700413 3700420, overlap 3700404 ATTAGGTTGACTATA GCTAATCATTAATTAAATG CTA CATTTAATTGATGATTAGC TTAATTGTTATTAGA TERM 4038 3700448 - 3700408 - f 100 -17.3 -2.79302 | opp_overlap 3700408 3700404, overlap 3700413 3700420 ATTAGGTTGACTATA GCTAATCATTAATTAAATG CTA CATTTAATTGATGATTAGC TTAATTGTTATTAGA TERM 4039 3700443 - 3700413 - f 85 -10 -3.14468 | opp_overlap 3700408 3700404, overlap 3700408 3700420 GTTGACTATAGCTAA TCATTAATTAAATG CTA CATTTAATTGATGA TTAGCTTAATTGTTA TERM 4040 3701151 - 3701132 - g 76 -8 -3.9279 | ACTTAATGCTAGAAA TGTTAAGA TAAA TCTTAACA TAAAAGGTTATAAAT TERM 4041 3701194 - 3701157 - g 70 -5.1 -4.6821 | opp_overlap 3701166, overlap 3701159 AATCTTAACATAAAA GGTTATAAATTTTTACC TTAT GTTAAAAATTTACAAGC AAGTAGAGATAACTT CD3168 3701007 - 3701405 + | hypothetical protein CD3169 3701393 - 3702331 + | putative transporter TERM 4042 3702559 - 3702613 + T 86 -11.9 -2.62461 | opp_overlap 3702560 3702565 3702571, overlap 3702565 3702570 CCAAATAGTCAATCT ATAAAATAAAAACTGGACTAATCAT ATAAA ATCATTAGTCCAGCTTTTATTTTAC GTACTTTTTATGTTG TERM 4043 3702612 - 3702560 - T 100 -17.6 -2.57781 | opp_overlap 3702559 3702565 3702570, overlap 3702565 3702571 CAAATAGTCAATCTA TAAAATAAAAACTGGACTAATCAT ATAAA ATCATTAGTCCAGCTTTTATTTTA CGTACTTTTTATGTT TERM 4044 3702607 - 3702565 - T 100 -13.1 -4.47551 | opp_overlap 3702559 3702565 3702570, overlap 3702560 3702571 AGTCAATCTATAAAA TAAAAACTGGACTAATCAT ATAAA ATCATTAGTCCAGCTTTTA TTTTACGTACTTTTT TERM 4045 3702565 - 3702607 + T 100 -10.9 -4.28589 | opp_overlap 3702565 3702560 3702571, overlap 3702559 3702570 AGTCAATCTATAAAA TAAAAACTGGACTAATCAT ATAAA ATCATTAGTCCAGCTTTTA TTTTACGTACTTTTT TERM 4046 3702570 - 3702602 + T 83 -6.4 -5.10933 | opp_overlap 3702565 3702560 3702571, overlap 3702565 3702559 ATCTATAAAATAAAA ACTGGACTAATCAT ATAAA ATCATTAGTCCAGC TTTTATTTTACGTAC TERM 4047 3702601 - 3702571 - T 100 -9.9 -5.54907 | opp_overlap 3702570 3702565 3702559, overlap 3702565 3702560 TCTATAAAATAAAAA CTGGACTAATCAT ATAAA ATCATTAGTCCAG CTTTTATTTTACGTA secG 3702939 - 3702715 - | putative subunit of preprotein translocase eno 3704824 - 3703532 - | enolase TERM 4048 3705198 - 3705220 + r 76 -2.1 -5.86976 | TATTTATATCATTAT TTACATTAT TATCT ATATTGTAA TTTTTTATTTTATAA TERM 4049 3705331 - 3705305 - R 75 -6.8 -4.49337 | opp_overlap 3705305, overlap 3705297 CCAGAACTTACAAAA TTTAAACCTTAT GTC ATAAAGTCTAAA CTTTACAAAATAAAC gpmI 3706944 - 3705412 - | phosphoglyceromutase tpi 3707696 - 3706953 - | triosephosphate isomerase pgk 3708924 - 3707722 - | phosphoglycerate kinase TERM 4050 3709110 - 3709075 - R 100 -9.9 -5.40072 | gap 1, opp_overlap 3709075 TTTTTCTTAAAAAAA GTCCTGAGTCCGTAGT ATTAA ACTACAAACTC-GGAC TTTGTCAATCTACTT gapB 3710153 - 3709146 - | glyceraldehyde-3-phosphate dehydrogenase 2 TERM 4051 3709910 - 3709930 + g 76 -7.6 -3.92097 | CAGCCCATGGTAGGT CAGCAGGA TTTCT TTCTGCTG TTACTTTTATTTCTT cggR 3711235 - 3710213 - | central glycolytic genes regulator TERM 4052 3711342 - 3711354 + r 91 -4.9 -6.12458 | opp_overlap 3711342 GTATAGATTTCAATA GTTTT TCA AAAAC TTTTTTATTTTTTTA glnF 3713379 - 3712033 - | RNA polymerase sigma-54 factor TERM 4053 3712570 - 3712590 + g 91 -9.9 -4.14725 | opp_overlap 3712568 TTTATAATAACTATT GATTCTTAT TTG ATAAGAATC TTTCTCATTTAAATA TERM 4054 3713477 - 3713426 - R 73 -3.3 -5.54907 | gap 1, opp_overlap 3713439 3713463 TTTATAAAAGAAAAA CCCTCCTGTAT-ATGTATATTCTA TCATT TAAAATATACCTTATGCAAAAGGG TTTTTTTTATTTACA xdhA3 3716092 - 3713531 - | xanthine dehydrogenase, molybdenum binding and iron-sulfur binding subunits CD3178 3717477 - 3716086 - | D-hydantoinase TERM 4055 3717235 - 3717211 - G 76 -8.7 -3.39521 | opp_overlap 3717201 3717225 TGTAGCAAAATCCAA TATAGTAGTAG TTC CTCCTACTATA GCAGCTTTTGTTCCT CD3179 3718869 - 3717760 - | putative dihydroorotate dehydrogenase, catalytic subunit pbuX 3720413 - 3719061 - | xanthine permease TERM 4056 3719157 - 3719173 + g 81 -8.1 -4.06419 | TAAACTACCTGTTGT TATTCCA CTA TGGAATA TTGTTTGTACCCAAG CD3181 3721940 - 3720612 - | putative chlorohydrolase/aminohydrolase CD3182 3723551 - 3721968 - | D-aminoacylase CD3183 3724754 - 3723567 - | peptidase dpaL2 3726406 - 3725192 - | diaminopropionate ammonia-lyase TERM 4057 3726636 - 3726603 - R 88 -4.7 -5.86976 | opp_overlap 3726603 3726603, overlap 3726634 TTATAAAAGAAAAAA TTCTCATATTGGGAA ATTT TTATCAATACGAGAA TTATCAATTCGAGAA TERM 4058 3727466 - 3727482 + r 70 -3.7 -5.14563 | overlap 3727469 TCTTGTTTTCCATTC TAAGTAC TTC GTACTAA TTTTTTCATCAGCGA CD3186 3729461 - 3727644 - | sigma54-dependent transcriptional regulator TERM 4059 3729718 - 3729660 - R 100 -10 -6.22691 | opp_overlap 3729678 3729681, overlap 3729709 CAATAATAAAAAAAA GCTTTCCTCATATAACAAATATATTTTT GAC ATAAAAATATACATTATATGAGAAAAGC TCAATAGTTAAATAT tdcF 3730222 - 3729845 - | putative regulatory endoribonuclease TERM 4060 3730182 - 3730192 + g 72 -6.8 -4.14392 | GAATATGGTCCAATT GCTC CTG GAGC TTTCTCTGTAGCTAT CD3188 3731127 - 3731612 + | hypothetical protein CD3189 3732351 - 3731812 - | putative iron-sulfur flavoprotein CD3190 3732757 - 3732344 - | MerR family transcriptional regulator CD3191 3733914 - 3732793 - | putative oxidoreductase TERM 4061 3734328 - 3734339 + H 70 -3 -5.56112 | overlap 3734333 TGAATAGTGTATACC CTTT TTAA AAAG TTTTTTCCTTTTTAT TERM 4062 3734342 - 3734388 + H 100 -10.6 -4.66537 | opp_overlap 3734341, overlap 3734333 CCTTTTTAAAAAGTT TTTTCCTTTTTATATTTGTGAT ACA ATGTTAAATATAAAAAGGAAAA TTTTGTATTAAAGAA CD3192 3734513 - 3736165 + | cell surface protein TERM 4063 3736196 - 3736246 + T 100 -15.2 -5.72207 | opp_overlap 3736201 3736205, overlap 3736201 CTATTAATTATTACA AGCAATAAAGCCATAAATATTGAA ATT TTCAATATTTATGGCTTTATTTTA TTTTTTTAATTTAAA TERM 4064 3736201 - 3736241 + T 100 -21.7 -5.57888 | opp_overlap 3736201 3736205, overlap 3736196 AATTATTACAAGCAA TAAAGCCATAAATATTGAA ATT TTCAATATTTATGGCTTTA TTTTATTTTTTTAAT TERM 4065 3736241 - 3736201 - T 100 -21.7 -3.48438 | opp_overlap 3736201 3736196, overlap 3736205 AATTATTACAAGCAA TAAAGCCATAAATATTGAA ATT TTCAATATTTATGGCTTTA TTTTATTTTTTTAAT TERM 4066 3736237 - 3736205 - T 100 -18.1 -4.37199 | opp_overlap 3736201 3736196, overlap 3736201 ATTACAAGCAATAAA GCCATAAATATTGAA ATT TTCAATATTTATGGC TTTATTTTATTTTTT CD3193 3737438 - 3736512 - | putative phage-related protein TERM 4067 3736929 - 3736945 + g 72 -8.1 -3.34222 | overlap 3736940 TGTCTCATTTTCTGT TTCATAC CCA GTATGAA TTATCAAATCATAAT TERM 4068 3737823 - 3737800 - H 79 -9.8 -2.67747 | overlap 3737799 CGTCCATATCATAAG TTGTGTATTT ATAT AAATACACAA TTAAAAATAAATCAC CD3194 3738048 - 3738968 + | AraC family transcription regulator CD3195 3739054 - 3741474 + | putative excinuclease ABC subunit A CD3196 3741534 - 3742496 + | putative penicillin-binding protein TERM 4069 3742583 - 3742608 + F 93 -11.3 -3.38272 | opp_overlap 3742586, overlap 3742586 CCAAACCCTCCATTA TAACACCAGAC TTTT GTTTGGTGTTA TTATGACTAATACTA TERM 4070 3742586 - 3742605 + F 76 -8.6 -3.82824 | opp_overlap 3742586, overlap 3742583 AACCCTCCATTATAA CACCAGAC TTTT GTTTGGTG TTATTATGACTAATA CD3197 3742649 - 3743395 + | MerR family transcriptional regulator cme 3743481 - 3744731 + | multidrug resistance protein TERM 4071 3745033 - 3744987 - T 100 -11.2 -3.94724 | opp_overlap 3744995, overlap 3744989 CAAATCATATAATAA TACCTCCATTTATATCATAAAT TAA ATTTATAGTACAAATGGAGGAA AATAAAGTATTTATA TERM 4072 3745031 - 3744989 - T 100 -13.8 -3.54548 | opp_overlap 3744995, overlap 3744987 AATCATATAATAATA CCTCCATTTATATCATAAAT TAA ATTTATAGTACAAATGGAGG AAAATAAAGTATTTA TERM 4073 3745247 - 3745266 + T 77 -5.1 -5.29742 | TTATAATTATACTGA GTTATCT ACTAAA AGATAAC TTTCTTTTTTTATCT CD3199 3746261 - 3745248 - | putative ABC transporter, permease protein CD3200 3747292 - 3746264 - | putative ABC transporter, permease protein TERM 4074 3746594 - 3746607 + g 73 -3.9 -5.2204 | opp_overlap 3746594 ACTAGCTTGAACTAA TACTT GTGG AAGTA TTTTTATTCCTTCTA CD3201 3748137 - 3747292 - | ABC transporter, ATP-binding protein TERM 4075 3748430 - 3748380 - R 100 -18.9 -5.38549 | opp_overlap 3748380, overlap 3748393 GTGAAATAATAAAAA GCTTAATAAAAAATCTTGTTTTC ATCAG AAAAACAAGATTTTTCATTAAGC TTTTTATTAAACTTT TERM 4076 3748380 - 3748430 + r 100 -16 -5.11112 | opp_overlap 3748380 3748393 GTGAAATAATAAAAA GCTTAATAAAAAATCTTGTTTT CATCAGA AAAACAAGATTTTTCATTAAGC TTTTTATTAAACTTT TERM 4077 3748417 - 3748393 - R 88 -6.6 -5.4756 | opp_overlap 3748380, overlap 3748380 AAGCTTAATAAAAAA TCTTGTTTTC ATCAG AAAAACAAGA TTTTTCATTAAGCTT CD3202 3749685 - 3748555 - | two-component sensor histidine kinase CD3203 3750353 - 3749682 - | two-component response regulator TERM 4078 3750532 - 3750500 - R 100 -10 -5.05601 | opp_overlap 3750518 TATCATAGATAAAAA TAGCCTACTAACTT TTTCT ATGTTAGCAGGCTA AAATATTTCTAATAA CD3204 3751206 - 3750556 - | hypothetical protein TERM 4079 3751041 - 3751056 + g 74 -3.2 -5.40072 | TATATTCCATTTTTT CAGCTA ATTC TTGCTG TTTTTTTACAGAAAA CD3205 3752057 - 3752650 + | putative nitroreductase TERM 4080 3753007 - 3752986 - g 70 -8.9 -2.59714 | opp_overlap 3752974, overlap 3752985 ATTTAATTAGAATAG TTATTTCCA AAAT TGGAAATAA AACAAAATAATCATC CD3206 3752703 - 3753017 + | hypothetical protein CD3207 3754960 - 3753581 - | putative Na+ driven multidrug efflux pump TERM 4081 3753785 - 3753772 - G 76 -3.9 -5.34655 | GAATTAAAAATAAAA TTTGA CGAG TCAAA GAAGTAAAAAGTCCC TERM 4082 3754440 - 3754426 - G 76 -2.9 -5.65496 | TATTAAAAACAAAAA TGAAT AATGG ATTCA AAATTGTATTAATAA TERM 4083 3754698 - 3754711 + g 72 -4.5 -4.98758 | CATATAGAATTTCCT GCTGC TTTT GTAGC TTTTTCTGAATTTTT CD3208 3755429 - 3754968 - | MarR family transcriptional regulator TERM 4084 3755749 - 3755733 - H 82 -8.1 -4.45068 | opp_overlap 3755733 3755735 ATCTGTAATAATAAA TATATCG AAT CGATATA TATCTAATTGATACC TERM 4085 3755733 - 3755749 + H 71 -8.1 -3.02096 | opp_overlap 3755733, overlap 3755735 ATCTGTAATAATAAA TATATCG AAT CGATATA TATCTAATTGATACC TERM 4086 3755854 - 3755864 + G 74 -5.4 -5.00616 | opp_overlap 3755854 AAATAATGTCAGAAA GTAC CTC GTAC TTTTTTGACGCCAGC CD3209 3755757 - 3756290 + | PadR-family transcriptional regulator CD3210 3756330 - 3756842 + | hypothetical protein CD3211 3756839 - 3757489 + | hypothetical protein TERM 4087 3757516 - 3757549 + T 100 -10.5 -5.57729 | gap 1, opp_overlap 3757516 AACAAATACTAAAAA CCGTCAAGCACGAATA AAC TATTCAT-CTTGACGG TTTTTTATGTTATTT TERM 4088 3757549 - 3757516 - T 100 -12.7 -4.97461 | gap 1, opp_overlap 3757516 AACAAATACTAAAAA CCGTCAAGCACGAATA AAC TATTCAT-CTTGACGG TTTTTTATGTTATTT CD3212 3758403 - 3757624 - | hypothetical protein TERM 4089 3757716 - 3757734 + g 71 -3.2 -5.28481 | CATATTGTTCAAACA TATCTTTT TGA GAAGGATA TTTTTTAATTAGCTC CD3213 3758766 - 3758515 - | hypothetical protein CD3214 3759964 - 3759095 - | AraC family transcription regulator TERM 4090 3759901 - 3759913 + g 81 -6.3 -5.05601 | TTAAATCTAACATCT CATCT AAA AGATG TTTTTCTATATAATC TERM 4091 3760078 - 3760058 - R 81 -7.6 -4.54047 | opp_overlap 3760058 TTATGGCACACAAAA GACACTTC TATTT GAAGTGCC TATCTACTCTGTATA TERM 4092 3760229 - 3760249 + r 72 -8.4 -3.1355 | opp_overlap 3760240 AATCTAACTTTTCCA CTTCAAGT ATACA ACTTGAAG TTAGCTCTAAATCAA CD3215 3761063 - 3760302 - | putative osmoprotectant acid ABC transporter,ATP-binding protein CD3216 3762614 - 3761079 - | putative osmoprotectant ABC transporter,substrate-binding/permease protein TERM 4093 3763004 - 3763018 + r 73 -4.4 -5.14682 | TTATTAAAATATCAT TATAAT TTT ATTATA TTTTATTTATTATAC snorO 3765268 - 3763028 - | putative nogalamycin resistance protein TERM 4094 3765613 - 3765576 - R 90 -6.5 -5.72616 | opp_overlap 3765576 AGTTACATAAAAAAA GTATCTTGCCTATGATT CTAA AACCATAAATAAGATAC TATGTTTTACACTGT CD3218 3766596 - 3765796 - | hypothetical protein TERM 4095 3766452 - 3766431 - G 79 -7.3 -4.36914 | TTCCTCCCCATAAAA CCTCATCAT CTTG ATGTTGAGG ATAAAACACTGCTGC TERM 4096 3766827 - 3766787 - R 100 -9.9 -5.92399 | TAATAAAATAAAAAA GCCTTCTAACTGCAACATT GCA AACATTACAGCCAGAAAGC TTCTTAATTCTTAAA hslO 3767862 - 3766987 - | chaperonin TERM 4097 3767949 - 3767961 + r 74 -4.8 -5.24291 | TATCTATCTTAACCT TGGG CAAAA CCCA TTTTATTTTAATTTT CD3220 3768891 - 3768145 - | putative methyltransferase CD3220A 3769132 - 3768878 - | small acid-soluble spore protein TERM 4098 3769186 - 3769203 + r 70 -2.7 -5.58209 | overlap 3769188 ATACAAATATGTAAG GGGTATT TATT AATACAC TTTTTTTAAATTTAG CD3221 3770372 - 3769254 - | putative amidohydrolase TERM 4099 3770561 - 3770519 - R 100 -13.1 -3.23538 | opp_overlap 3770522 3770525, overlap 3770522 3770525 ATAATTCACCATTAA TAATAATTCCCCTGTTTCA TAAAT CAAAACAGAGGAATTATTA TTGGAAAATTTTATT TERM 4100 3770558 - 3770522 - R 91 -10.4 -3.75292 | opp_overlap 3770522 3770525, overlap 3770519 3770525 ATTCACCATTAATAA TAATTCCCCTGTTTCA TAAAT CAAAACAGAGGAATTA TTATTGGAAAATTTT TERM 4101 3770555 - 3770525 - R 75 -7.7 -4.00445 | opp_overlap 3770522 3770525, overlap 3770522 3770519 CACCATTAATAATAA TTCCCCTGTTTCA TAAAT CAAAACAGAGGAA TTATTATTGGAAAAT sdaB 3771771 - 3770578 - | L-serine dehydratase dapA1 3772094 - 3772975 + | dihydrodipicolinate synthase TERM 4102 3773248 - 3773270 + F 100 -10.7 -5.43414 | opp_overlap 3773248 GAGTGATAAATTAGA CGTACAAAG TATAC CTTTGTACG TTTTTTGTATATAAT TERM 4103 3773270 - 3773248 - f 85 -10.7 -3.06711 | opp_overlap 3773248 GAGTGATAAATTAGA CGTACAAAG TATAC CTTTGTACG TTTTTTGTATATAAT TERM 4104 3773488 - 3773498 + G 75 -4 -5.31072 | opp_overlap 3773480, overlap 3773480 AAAGAAATTTTCCAA TAGA AAA TCTA TTTTTATTCTCTTCT TERM 4105 3774192 - 3774172 - g 78 -6.1 -4.75372 | opp_overlap 3774172 ATGATTTAGTAAAAA CACTTGAAG AAG CTCCAGGTG TTGTAGTAGTTGATA asd 3773400 - 3774401 + | aspartate-semialdehyde dehydrogenase dapA2 3774518 - 3775405 + | dihydrodipicolinate synthase dapB1 3775472 - 3776221 + | dihydrodipicolinate reductase TERM 4106 3776519 - 3776506 - g 71 -3.1 -5.29885 | AAGTTAAAAAGAAAA CACCT GTTA AGGTA TATGTAAATACTAAC dapD 3776445 - 3777161 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 4107 3777220 - 3777261 + T 100 -10.3 -5.10077 | gap 1, opp_overlap 3777223, overlap 3777222 3777223 TAAAAAATTAATTAA AAAGGTGTCTCTGTGTGAAT TTA ATTCAC-CAGAGGCACCCTC TTTTTTACAATATTT TERM 4108 3777222 - 3777259 + T 100 -12.9 -4.16351 | gap 1, opp_overlap 3777223, overlap 3777220 3777223 AAAAATTAATTAAAA AGGTGTCTCTGTGTGAAT TTA ATTCAC-CAGAGGCACCC TCTTTTTTACAATAT TERM 4109 3777223 - 3777258 + T 100 -16.4 -3.08726 | gap 1, opp_overlap 3777223, overlap 3777222 3777220 AAAATTAATTAAAAA GGTGTCTCTGTGTGAAT TTA ATTCAC-CAGAGGCACC CTCTTTTTTACAATA TERM 4110 3777258 - 3777223 - T 100 -14.2 -4.97312 | gap 1, opp_overlap 3777223 3777222 3777220 AAAATTAATTAAAAA GGTGTCTCTGTGTGAAT TTA ATTCAC-CAGAGGCACC CTCTTTTTTACAATA CD3228 3778602 - 3777613 - | hypothetical protein dapB2 3779042 - 3779797 + | dihydrodipicolinate reductase TERM 4111 3779869 - 3779815 - T 82 -8.3 -4.38927 | gap 1, opp_overlap 3779815 TTTGTACATAATAAA TCTCAATCTATTTAGGTATTCATATT CATC AATTTGAATATCTAATT-GATTGAGA TTTCTATTCTAAAAG TERM 4112 3779815 - 3779869 + T 95 -10.5 -4.27117 | gap 1, opp_overlap 3779815 TTTGTACATAATAAA TCTCAATCTATTTAGGTATTCATATT CATC AATTTGAATATCTAATT-GATTGAGA TTTCTATTCTAAAAG bclA2 3781827 - 3780151 - | exosporium glycoprotein TERM 4113 3780268 - 3780295 + g 90 -10 -3.93057 | opp_overlap 3780267 3780266 3780270 TAAAAAGCTTAAACT TACACTTACATC TGAT GAAGTAAGTGTA TTTACTGCTTTTGCA TERM 4114 3781890 - 3781851 - R 95 -11 -3.53012 | opp_overlap 3781846 3781853 3781855 3781857 3781861, overlap 3781852 3781855 3781872 TCCTCCTTTTTTAAA GTTAGAGTAATACTCTAT AAAT ATAGAGTATTACTCTATA TAATTATATGAATCG TERM 4115 3781889 - 3781852 - R 100 -14.5 -2.71712 | opp_overlap 3781846 3781853 3781855 3781857 3781861, overlap 3781851 3781855 3781872 CCTCCTTTTTTAAAG TTAGAGTAATACTCTAT AAAT ATAGAGTATTACTCTAT ATAATTATATGAATC TERM 4116 3781853 - 3781888 + r 100 -18 -2.99717 | opp_overlap 3781852 3781851 3781855 3781872, overlap 3781846 3781855 3781857 3781861 CTCCTTTTTTAAAGT TAGAGTAATACTCTAT AAAT ATAGAGTATTACTCTA TATAATTATATGAAT TERM 4117 3781855 - 3781886 + r 100 -16.2 -3.04931 | opp_overlap 3781855 3781852 3781851 3781872, overlap 3781853 3781846 3781857 3781861 CCTTTTTTAAAGTTA GAGTAATACTCTAT AAAT ATAGAGTATTACTC TATATAATTATATGA TERM 4118 3781886 - 3781855 - R 100 -16.2 -2.64155 | opp_overlap 3781853 3781846 3781855 3781857 3781861, overlap 3781852 3781851 3781872 CCTTTTTTAAAGTTA GAGTAATACTCTAT AAAT ATAGAGTATTACTC TATATAATTATATGA TERM 4119 3781857 - 3781884 + r 93 -13 -3.07506 | opp_overlap 3781855 3781852 3781851 3781872, overlap 3781855 3781853 3781846 3781861 TTTTTTAAAGTTAGA GTAATACTCTAT AAAT ATAGAGTATTAC TCTATATAATTATAT TERM 4120 3781861 - 3781880 + r 70 -8 -3.36313 | opp_overlap 3781855 3781852 3781851 3781872, overlap 3781857 3781855 3781853 3781846 TTAAAGTTAGAGTAA TACTCTAT AAAT ATAGAGTA TTACTCTATATAATT TERM 4121 3781890 - 3781872 - R 81 -9 -3.92602 | opp_overlap 3781861 3781857 3781855 3781853 3781846, overlap 3781855 3781852 3781851 GTAATACTCTATAAA TATAGAGT ATT ACTCTATA TAATTATATGAATCG TERM 4122 3782181 - 3782150 - R 90 -5.3 -5.95539 | TTTTAAATAAAAAAA CCTCAACACGATT AATAAA AATCATATTAAGG CATCCACAAAATTAT hpt 3782744 - 3782205 - | hypoxanthine phosphoribosyltransferase TERM 4123 3782936 - 3782967 + r 70 -7.5 -3.38564 | opp_overlap 3782938 3782945, overlap 3782938 3782945 TATTTTAGACAAAAA AAGAAAAAACTTG CACTAA CAAGTTTTTTCTA TTATACATAAATTTA TERM 4124 3782965 - 3782938 - R 100 -10.8 -5.71712 | opp_overlap 3782938 3782936 3782945, overlap 3782945 TTTTAGACAAAAAAA GAAAAAACTTGC ACTA ACAAGTTTTTTC TATTATACATAAATT TERM 4125 3782938 - 3782965 + r 85 -10.1 -3.25668 | opp_overlap 3782938 3782945, overlap 3782936 3782945 TTTTAGACAAAAAAA GAAAAAACTTG CACTAA CAAGTTTTTTC TATTATACATAAATT TERM 4126 3782958 - 3782945 - R 83 -3.1 -6.12458 | opp_overlap 3782945 3782938 3782936, overlap 3782938 CAAAAAAAGAAAAAA CTTGC ACTA ACAAG TTTTTTCTATTATAC CD3232 3784355 - 3783072 - | hypothetical protein TERM 4127 3784653 - 3784621 - R 100 -13.7 -6.18768 | opp_overlap 3784622 3784646, overlap 3784645 AAAAGACAAAAAAAA GTCTCAAAATGAGAT TCT ATATCATTTTGAGAC GGCTCAAATATATTA CD3233 3786579 - 3784804 - | putative sigma-54 interacting protein TERM 4128 3785922 - 3785946 + g 70 -5.2 -4.56367 | gap 1 AACTACAGGATTTGT CCTTCT-TAAA GTTA TTTATAGAAGG TTTCTTTATAAAATC TERM 4129 3786517 - 3786532 + g 72 -6.2 -4.23758 | opp_overlap 3786519 ATTGAGTACTGATAC TATAGC TTCA GCTATA TTTTGAATATCAGAT TERM 4130 3786732 - 3786760 + r 77 -9 -3.3464 | opp_overlap 3786732 3786737, overlap 3786737 AACATCTCCTTATAA CAAAAGACTAGG CTTAA CCTAGTCTTTTA TATTATATCCATATT TERM 4131 3786760 - 3786732 - R 95 -11.9 -3.30007 | opp_overlap 3786732 3786737, overlap 3786737 AACATCTCCTTATAA CAAAAGACTAGGC TTA ACCTAGTCTTTTA TATTATATCCATATT TERM 4132 3786755 - 3786737 - R 95 -9.6 -4.77165 | opp_overlap 3786732 3786737, overlap 3786732 CTCCTTATAACAAAA GACTAGGC TTA ACCTAGTC TTTTATATTATATCC TERM 4133 3786737 - 3786755 + r 93 -8.9 -4.76963 | opp_overlap 3786737 3786732, overlap 3786732 CTCCTTATAACAAAA GACTAGG CTTAA CCTAGTC TTTTATATTATATCC CD3234 3787360 - 3786791 - | hypothetical protein CD3235 3788179 - 3787544 - | single-strand DNA-binding protein TERM 4134 3788792 - 3788758 - R 100 -11 -5.68438 | opp_overlap 3788758 3788790 TTAGTAAATAAAAAA CTGCCCTAAAATATTA ATT CAATATTTTAAAGCAG TTTATAATCTTTATT CD3236 3789728 - 3788847 - | hypothetical protein prdF 3790855 - 3789848 - | putative proline racemase TERM 4135 3790881 - 3790894 + r 80 -6.7 -5.0925 | CCCTTAGGTTTATTT TGCGT CTTT ACGCA TTTTTAATTTTAGGA CD3238 3791357 - 3790875 - | hypothetical protein CD3239 3791842 - 3791375 - | hypothetical protein TERM 4136 3791687 - 3791703 + g 81 -5.9 -5.22258 | overlap 3791688 CAGCCAAGCGGCCGT TCTTTGT CCC ACAAAGG TTTTATTTTCATTTC TERM 4137 3791688 - 3791702 + g 71 -7.2 -3.70914 | overlap 3791687 AGCCAAGCGGCCGTT CTTTGT CCC ACAAAG GTTTTATTTTCATTT CD3240 3792624 - 3791857 - | hypothetical protein TERM 4138 3792634 - 3792671 + r 90 -10 -3.68378 | opp_overlap 3792639, overlap 3792633 3792639 ATCCACCTTTGTTCT TAAAACCCCTCTCCTA ACCGTG TAGGAGAAGGGTTCTA TATTTTCAAATATAA TERM 4139 3792666 - 3792639 - R 100 -12.1 -4.07568 | opp_overlap 3792634 3792633 3792639 CCTTTGTTCTTAAAA CCCCTCTCCTA ACCGTG TAGGAGAAGGG TTCTATATTTTCAAA TERM 4140 3792639 - 3792666 + r 90 -9.9 -3.83378 | opp_overlap 3792639, overlap 3792634 3792633 CCTTTGTTCTTAAAA CCCCTCTCCTA ACCGTG TAGGAGAAGGG TTCTATATTTTCAAA prdB 3793420 - 3792695 - | proline reductase TERM 4141 3792833 - 3792866 + g 78 -6.7 -4.55689 | opp_overlap 3792842, overlap 3792834 AGCATTAGCACCCAT TGGAACTAATGGAGC AACT GCTCTAGGAGTTCCG TTTTGTCTAACTACT CD3243 3793742 - 3793458 - | hypothetical protein prdA 3795703 - 3793823 - | proline reductase subunit proprotein TERM 4142 3796026 - 3796009 - R 76 -2.7 -5.95539 | TCTCAAACAAAAAAA GTGTCAA TTAA TCAACAC TTTTTCATTTTTTTT prdR 3797892 - 3796132 - | sigma-54-dependent transcriptional activator TERM 4143 3797984 - 3797958 - R 79 -9.8 -2.66634 | opp_overlap 3797953 3797961 3797964, overlap 3797955 3797961 3797964 TATTCTAGCATATTA TAATAATTATTT ATT AAATAATTATTA TTAAAATTTATTAAG TERM 4144 3797961 - 3797981 + r 70 -7.1 -3.72593 | opp_overlap 3797961 3797958 3797955 3797964, overlap 3797953 3797964 TCTAGCATATTATAA TAATTATTT ATT AAATAATTA TTATTAAAATTTATT TERM 4145 3798268 - 3798237 - R 77 -5.2 -5.38047 | TATTTACATAAAAAA GCCCCAAAATGACT TATA AATCAATTTGAGAC TTTTTATTTTAAACT CD3246 3800518 - 3798299 - | putative surface protein TERM 4146 3801285 - 3801270 - R 85 -6.2 -5.55769 | opp_overlap 3801272 TTTTATAATAAAAAA GATACT ATAG AGTATC TTCAAATATCACAAA TERM 4147 3801532 - 3801493 - R 100 -11.1 -5.28755 | opp_overlap 3801491 3801495 3801497 3801498, overlap 3801486 AAATACATTAAAAAA CATCTTTAGAAGTAA CTTTTAAGTT TTACTTCTAAAGATG TCTAACTTCTATTTA prdC 3802865 - 3801552 - | putative electron transfer protein TERM 4148 3801756 - 3801774 + g 84 -8.8 -4.28651 | overlap 3801753 ACATTTTTGAGCTTG TCCTGGAC AGT GTCCTGGA TTTTCACATTTTAAT TERM 4149 3803192 - 3803158 - R 95 -9.4 -4.90455 | opp_overlap 3803158 ATACATGTATAAAAA GTGTCAAAAAATAGAC ACC GTCTTTTTATCGACAC TTTTCTAACATATAC TERM 4150 3803158 - 3803192 + r 77 -7.2 -4.41548 | opp_overlap 3803158 ATACATGTATAAAAA GTGTCAAAAAATAGAC ACC GTCTTTTTATCGACAC TTTTCTAACATATAC CD3248 3804018 - 3803254 - | polysaccharide deacetylase TERM 4151 3803596 - 3803606 + g 72 -2.6 -5.34555 | AGTCCTTTTTCCTGT TATA TTA TATA TTTTTTCTGATGTAG sspB 3804291 - 3804512 + | small acid-soluble spore protein B TERM 4152 3804541 - 3804564 + F 100 -16.8 -5.1634 | opp_overlap 3804521 3804541 ACACCTGGGTATCAA CAGGGCTGCT AATT AGCAGCCCTG TTTTTCTATATTTAT TERM 4153 3804564 - 3804541 - f 100 -16.8 -3.14683 | opp_overlap 3804541, overlap 3804521 ACACCTGGGTATCAA CAGGGCTGCT AATT AGCAGCCCTG TTTTTCTATATTTAT CD3250 3804694 - 3805239 + | hypothetical protein CD3251 3806109 - 3805243 - | hypothetical protein TERM 4154 3805388 - 3805399 + g 71 -5.8 -4.5081 | GATATTTCTAATCCT TGGG GAAT CCCA TTTATTTCAATATTT CD3252 3806257 - 3806502 + | hypothetical protein TERM 4155 3806544 - 3806587 + T 100 -9.3 -5.42975 | gap 1, opp_overlap 3806554, overlap 3806554 ATTAAAAACTTATTT TATATAAAAAGAGTTGTCCA TTTTT TAGACAACTCTTTTT-TATA TTTTTATTTGTATAC TERM 4156 3806554 - 3806578 + T 93 -7.2 -5.69068 | opp_overlap 3806554, overlap 3806544 TATTTTATATAAAAA GAGTTGTCCA TTTTT TAGACAACTC TTTTTTATATTTTTA TERM 4157 3806578 - 3806554 - T 100 -9.4 -4.9792 | opp_overlap 3806554 3806544 TATTTTATATAAAAA GAGTTGTCCA TTTTT TAGACAACTC TTTTTTATATTTTTA folC 3807914 - 3806616 - | putative folylpolyglutamate synthase CD3254 3809078 - 3808047 - | putative serine protease TERM 4158 3809326 - 3809298 - R 78 -6.1 -5.03715 | ATTATTTGTAAAAAA GGAGATTATCT TTTTATT AGACAATCCCC TTGTATATTTTATTA TERM 4159 3810062 - 3810015 - R 93 -11 -3.30124 | opp_overlap 3810020, overlap 3810020 TGCTATTTTGCATAA TAAAACTGTCTTAATATAAATA ACAT TTTATATATTAAGACAGTTTCA ATCAATAGCCCTGTG TERM 4160 3810020 - 3810057 + r 79 -8.7 -3.6682 | opp_overlap 3810015 3810020 TTTTGCATAATAAAA CTGTCTTAATATAAATA ACAT TTTATATATTAAGACAG TTTCAATCAATAGCC TERM 4161 3810057 - 3810020 - R 93 -8.7 -4.77165 | opp_overlap 3810020, overlap 3810015 TTTTGCATAATAAAA CTGTCTTAATATAAATA ACAT TTTATATATTAAGACAG TTTCAATCAATAGCC CD3255 3810834 - 3810124 - | two-component response regulator TERM 4162 3811239 - 3811205 - R 100 -14.7 -5.4433 | opp_overlap 3811205 3811215 ATATATAAAGAAAAA CATACAAAAAGTATA GAATA TATACTTTTTGTATG TTTTTACTAATTCTT TERM 4163 3811205 - 3811239 + r 100 -14.7 -4.83593 | opp_overlap 3811205, overlap 3811215 ATATATAAAGAAAAA CATACAAAAAGTATA GAATA TATACTTTTTGTATG TTTTTACTAATTCTT valS 3813925 - 3811259 - | valyl-tRNA synthetase TERM 4164 3813379 - 3813389 + g 78 -6.8 -4.58859 | AAGTAGTTTTGCAAT CTGG GCA CCAG TTTATTATTCTATTT TERM 4165 3814018 - 3813983 - R 100 -14.2 -5.72622 | overlap 3814009 TTTAGAAATAAAAAA GAGCTCTTCATCCTCT TTAA AAAGGACGAAAAGCTC GCGTTACCACCTTAA CD3257 3815386 - 3814559 - | putative polysaccharide deacetylase TERM 4166 3815322 - 3815266 - G 73 -9.2 -2.52676 | CACCTTTTGAACTTA TATTTTCAACTGGAACATTATTAA TTTTTTCCT CCAATAATGTTCCAGTTAAAATTA AAACAGCTATAAGAA CD3258 3816870 - 3815434 - | iron-only hydrogenase CD3259 3817826 - 3816957 - | hypothetical protein TERM 4167 3817979 - 3817966 - R 93 -6.7 -5.9218 | opp_overlap 3817959 3817966, overlap 3817958 TAGACAATAAAAAAA CTGCT TTAA AGCAG TTTTTTATCCTATCT TERM 4168 3817966 - 3817979 + r 87 -6.7 -5.35459 | opp_overlap 3817966 3817958, overlap 3817959 TAGACAATAAAAAAA CTGCT TTAA AGCAG TTTTTTATCCTATCT phoU 3818637 - 3817984 - | putative phosphate transport system protein phoT 3819429 - 3818665 - | phosphate import ABC transporter, ATP-binding protein TERM 4169 3818821 - 3818835 + g 82 -5 -5.48825 | ATTATGTGTAACTAT GACTAT TGT GTAGTC TTTTTTTAAATCCTC CD3262 3820272 - 3819448 - | phosphate ABC transporter permease CD3263 3821191 - 3820274 - | putative phosphate ABC transporter, permease protein TERM 4170 3821092 - 3821113 + g 71 -4.5 -4.75174 | opp_overlap 3821092 CTACTAAAGCACTAA GTAGAAAAA TATT TTTTGCTAC TTTTTCAATTACGTA CD3264 3822044 - 3821571 - | hypothetical protein TERM 4171 3822455 - 3822397 - R 75 -8.6 -3.49864 | gap 1, overlap 3822398 3822400 TTTATATAATAAAAC TGACTGTAATTTAACTGGCAAAGTCTA GAAGAA TAGGCTTTATCAATTAAATTACAGTC- AGCTATTTTATAATA TERM 4172 3822455 - 3822398 - R 100 -14.6 -2.69195 | overlap 3822397 3822400 TTATATAATAAAACT GACTGTAATTTAACTGGCAAAGTCTA GAAGAA TAGGCTTTATCAATTAAATTACAGTC AGCTATTTTATAATA TERM 4173 3822453 - 3822400 - R 85 -11.4 -2.8763 | overlap 3822397 3822398 ATATAATAAAACTGA CTGTAATTTAACTGGCAAAGTCTA GAAGAA TAGGCTTTATCAATTAAATTACAG TCAGCTATTTTATAA CD3265 3823215 - 3822535 - | two-component response regulator CD3266 3825292 - 3823265 - | two-component sensor histidine kinase TERM 4174 3824567 - 3824577 + g 70 -4 -4.86731 | opp_overlap 3824567 ACATCCAAAATATAA GTAA ATT TTAC TTTTGTTTGAAAGAA TERM 4175 3825262 - 3825272 + g 70 -4 -4.88407 | TGAGAGTTCCTTTTA GTAT ATT ATAC TTTTTCATTGCATCA CD3267 3826029 - 3825352 - | two-component response regulator TERM 4176 3826622 - 3826591 - R 100 -7.6 -6.09196 | gap 1, opp_overlap 3826601 TTTAAAACAAAAAAA GACTATGCAATATAA AAA TTATATT-CATAGCC GGTTGCACCACTAAC TERM 4177 3826895 - 3826848 - R 70 -7.3 -3.76835 | gap 2, opp_overlap 3826848, overlap 3826845 TTCAATAATAGACAA TACCCTGCAAGTTAAAGCATCAT TTTT ATGA-GCTT-ATCTCACAGGGTA TTATATGTTTACTTT CD3268 3827768 - 3826926 - | putative phosphate ABC transporter,substrate-binding protein pepF 3829804 - 3828020 - | putative endopeptidase TERM 4178 3829689 - 3829700 + g 74 -3 -5.41359 | TTATATTCTTTTACT TCTT GGAT AAGA TTTTTTACTTTACTT CD3270 3830535 - 3829870 - | putative cation transporter TERM 4179 3830329 - 3830341 + g 77 -7.7 -4.0492 | TTGAGCAGGCATTCT TGCTG GGT CAGCA TTTGTATACAAATTA TERM 4180 3830685 - 3830672 - R 100 -8.1 -5.71712 | opp_overlap 3830672 3830671 3830669 TTTGATACAAAAAAA CCCAC AACT GTGGG CTATTTGCTTAGGTA CD3271 3830901 - 3830686 - | hypothetical protein TERM 4181 3830871 - 3830888 + g 71 -5.7 -4.3739 | opp_overlap 3830870, overlap 3830863 CCACTATTACAAATT TGTATAT TTTT ATATACA TTTTATCAAACAATA CD3272 3831434 - 3830925 - | hypothetical protein feoA3 3831640 - 3831858 + | putative ferrous iron transport protein A TERM 4182 3833097 - 3833077 - g 80 -6.1 -4.87803 | TATTCTTAAATAAAA CAGCCTTTA AAA CAGAGGCTG AACCATTTATATTAG TERM 4183 3833561 - 3833548 - g 70 -5.3 -4.6759 | opp_overlap 3833548 AATATGGCAATAAAA TGATG TTTA CATCA TTTGCATATCAATTT feoB3 3831876 - 3833822 + | putative ferrous iron transport protein B TERM 4184 3833858 - 3833896 + T 70 -3.3 -5.37043 | gap 1 AAATAAGATAAAAGT GGGTGTCTCA-AAATTAA CTTT TTAGTTCATGAGGCACTC TTTTTTATATAAAAT TERM 4185 3833992 - 3833964 - T 74 -4.7 -5.1675 | gap 1, opp_overlap 3833964 TTATCTAGTAAAAAA GAGGCTTATCTC TATTTT GAGACAA-CCTC TTTTTTTGTTACTTA CD3275 3835056 - 3834001 - | putative phosphosugar isomerase CD3276 3835910 - 3835104 - | PTS system, IID component TERM 4186 3835142 - 3835156 + g 71 -7.2 -3.82261 | overlap 3835139 AAGCGATTCCTGTTA CTATAG TGC CTATAG TTAATTTTGTTACAC CD3277 3836688 - 3835897 - | PTS system, IIC component CD3278 3837150 - 3836728 - | PTS system, IIA component TERM 4187 3837017 - 3837033 + g 71 -6.6 -4.00468 | CTTCTAATTTCTTTC TCAGCA TCATC TGCTGA TTTATCCGTTGTCAT CD3279 3837645 - 3837166 - | PTS system, IIB component TERM 4188 3837717 - 3837737 + r 100 -9.8 -5.22943 | opp_overlap 3837717 CTATAAAAGCAAAAA GTATGCCA AATAC TGGCATAC TTTTTTAAATTTCAT TERM 4189 3837737 - 3837717 - R 100 -10.5 -5.1417 | opp_overlap 3837717 CTATAAAAGCAAAAA GTATGCCAA ATA CTGGCATAC TTTTTTAAATTTCAT CD3280 3840533 - 3837777 - | putative transcription antiterminator TERM 4190 3840898 - 3840857 - R 100 -11.3 -4.81249 | opp_overlap 3840870 TTTCAAATTTAAAAA GGCTATAAATAAATTTATT TTTA AATAAATCTACTTATAACC TCACAATAATACTTA proC2 3841934 - 3841131 - | pyrroline-5-carboxylate reductase TERM 4191 3842161 - 3842130 - R 100 -13.2 -3.30701 | opp_overlap 3842127 3842130, overlap 3842125 TTTCATTAAACTTAA CGAGCTAACTTCCT ATTT AGAAAGTTAGCTCA TAATTAATCTAAAAT TERM 4192 3842130 - 3842161 + r 73 -8.8 -2.81725 | opp_overlap 3842130 3842125, overlap 3842127 TTTCATTAAACTTAA CGAGCTAACTTCCT ATTT AGAAAGTTAGCTCA TAATTAATCTAAAAT pflD 3844628 - 3842259 - | putative formate acetyltransferase TERM 4193 3843014 - 3843026 + g 70 -4.1 -4.9792 | TTGCTCCACCTCTTT GGTAA TCC TTGCC TTTTTCTATACAATC pflE 3845541 - 3844633 - | putative pyruvate formate-lyase 3 activating enzyme TERM 4194 3845501 - 3845511 + g 70 -4 -4.95896 | ATCCCTGGTCCATCA TGTA TGC TACA TTTTTGTAAGTTTAT TERM 4195 3845839 - 3845872 + r 78 -6.9 -4.81734 | opp_overlap 3845841, overlap 3845841 TAAAAATTAAATAAA AATAGAGACTACA CTTTACCA TGTAGTCTCTATC TTTTTGGTCATATTT TERM 4196 3845870 - 3845841 - R 100 -10.2 -5.43974 | opp_overlap 3845839 3845841 AAAATTAAATAAAAA TAGAGACTACAC TTTACC ATGTAGTCTCTA TCTTTTTGGTCATAT TERM 4197 3845841 - 3845870 + r 86 -9.5 -4.01045 | opp_overlap 3845841, overlap 3845839 AAAATTAAATAAAAA TAGAGACTACA CTTTACCA TGTAGTCTCTA TCTTTTTGGTCATAT CD3284 3846965 - 3845886 - | protease pgi 3848470 - 3847121 - | glucose-6-phosphate isomerase TERM 4198 3848341 - 3848313 - G 76 -9 -3.40403 | opp_overlap 3848312 TCTTCTTTATCATAA TTTTTAGGAAGG TCTAT CCATCCTAAAAA AGTATTTCCTAAACC TERM 4199 3848682 - 3848654 - R 100 -10.5 -5.68039 | opp_overlap 3848652 3848654 AAATTTACAAAAAAA GAAACTCTAAACG TAT CATTTAAAGTTTC TCTTTTATTTATCCT CD3286 3850363 - 3848735 - | putative sodium-dependent phosphate transporter CD3287 3852091 - 3850487 - | hypothetical protein TERM 4200 3852143 - 3852126 - R 91 -7 -5.47159 | opp_overlap 3852126 TTGTAATATAAAAAA GCTAGG GTTATT CCTAGC TTTCTACAAATATAA TERM 4201 3852126 - 3852143 + r 75 -7.7 -3.88787 | opp_overlap 3852126 TTGTAATATAAAAAA GCTAGGG TTAT TCCTAGC TTTCTACAAATATAA CD3288 3852456 - 3852139 - | hypothetical protein CD3289 3852826 - 3852461 - | hypothetical protein CD3290 3853956 - 3852907 - | putative protein translocase CD3291 3854781 - 3854197 - | hypothetical protein CD3292 3855239 - 3854796 - | hypothetical protein CD3293 3856112 - 3855240 - | hypothetical protein TERM 4202 3856080 - 3856093 + g 85 -3.9 -5.68023 | overlap 3856088 ATAATCATCATTTAT TTCTA AGTT TAGAA TTTTTTTAATTATAG CD3294 3856524 - 3856165 - | putative type IV pilin CD3295 3857663 - 3856578 - | putative type IV pilus-assembly protein CD3296 3859213 - 3857834 - | putative type IV pilus-assembly protein CD3297 3859886 - 3859206 - | hypothetical protein TERM 4203 3859647 - 3859665 + g 83 -3.2 -5.81622 | overlap 3859660 TCTAAGTGTTTCTAT TTCTGA TATTTCT TCAGAA TTTTTTTGATTTTGT TERM 4204 3860234 - 3860199 - R 100 -8.4 -5.86061 | TTTTAGCAAAAAAAA GTAAAATGGCATAGCC TCAA AGCTACACCAATTTAC TAAAAATTATATCAT CD3298 3861357 - 3860278 - | putative ATP/GTP-binding protein TERM 4205 3861851 - 3861869 + H 79 -2.4 -6.01369 | TTAGACACATTCAAG GTACCT AATATAC AGGTGC TTTTTTTGTTGTTTA CD3299 3861935 - 3863305 + | transporter engB 3864154 - 3863570 - | GTP-binding protein lon 3866540 - 3864171 - | ATP-dependent protease La TERM 4206 3864319 - 3864348 + g 85 -7.3 -4.9138 | gap 1, opp_overlap 3864328 GGAATTAATACTTTT GTTA-TACCAGCTC TAT GAGCTGCTAATAAC TTTTCTTTAACTCCT TERM 4207 3865074 - 3865098 + g 76 -7.9 -3.97088 | opp_overlap 3865074, overlap 3865076 3865096 CATTCTATCTAATAA TGGTCTTGGTA TAT TACCTAGACTA TTTGCTGTTGTAACA TERM 4208 3865076 - 3865096 + g 74 -8.3 -3.57271 | opp_overlap 3865074, overlap 3865074 TTCTATCTAATAATG GTCTTGGTA TAT TACCTAGAC TATTTGCTGTTGTAA chrA 3866714 - 3867226 + | chromate transport protein chrA' 3867214 - 3867741 + | chromate transport protein TERM 4209 3867784 - 3867800 + T 100 -10.9 -4.36063 | opp_overlap 3867784 ATTAACATAAAAAAA GGAGCTT TTA AAGCTCC TTTTCATCATCTTAT TERM 4210 3867800 - 3867784 - T 100 -10.9 -5.82172 | opp_overlap 3867784 ATTAACATAAAAAAA GGAGCTT TTA AAGCTCC TTTTCATCATCTTAT clpX 3869062 - 3867812 - | ATP-dependent protease ATP-binding subunit clpP1 3869665 - 3869081 - | ATP-dependent Clp protease proteolytic subunit TERM 4211 3869535 - 3869519 - G 73 -5.9 -4.58395 | TTCAGCTTCTAAAAA TAATAGC TGT GCTACTA TAAGCCCTGCTGTGG TERM 4212 3869691 - 3869727 + r 100 -17 -3.3506 | opp_overlap 3869694, overlap 3869694 CCCCTTTATTCTATA TAATTTACAGTAGCTT TTTTT AAGCTACTGTAAATTA TTATACGCATTTAAC TERM 4213 3869694 - 3869724 + r 100 -14.3 -3.81022 | opp_overlap 3869694, overlap 3869691 CTTTATTCTATATAA TTTACAGTAGCTT TTTTT AAGCTACTGTAAA TTATTATACGCATTT TERM 4214 3869724 - 3869694 - R 100 -14.3 -3.50393 | opp_overlap 3869691 3869694 CTTTATTCTATATAA TTTACAGTAGCTT TTTTT AAGCTACTGTAAA TTATTATACGCATTT TERM 4215 3869785 - 3869805 + r 70 -4.7 -4.87892 | opp_overlap 3869785 CTAAACATTTCATAA CGTCAACTA TAT TAGTTAGCG TTTATTTTATTAAGC tig 3871101 - 3869815 - | trigger factor CD3307 3871765 - 3871295 - | putative phosphoesterase TERM 4216 3871370 - 3871394 + g 77 -7.9 -4.05033 | opp_overlap 3871366 TTTATACGATACTCC TCTTGGAAGTG AAG TGCTTCCAGGA TTTATGTAAAGTACA rph 3873114 - 3871765 - | ribonuclease PH TERM 4217 3872983 - 3872966 - G 72 -4.1 -5.02074 | CTATTTCTTAAAAAA GGAGGAA CTTT TTCTTCC ACTGATGCAGTGCAT dnaL 3875307 - 3873274 - | DNA ligase TERM 4218 3875422 - 3875455 + r 79 -4.1 -5.69262 | opp_overlap 3875422 TTATTACAAAAAAAA CTCTTATTAGT ATCTTTAATACG ACTAATAAGAG TTTTTATTTTTATCA TERM 4219 3875455 - 3875422 - R 83 -4.1 -5.9873 | gap 1, opp_overlap 3875422 TTATTACAAAAAAAA CTCTTATTAGT-ATCT TTA ATACGACTAATAAGAG TTTTTATTTTTATCA TERM 4220 3875463 - 3875473 + r 76 -2.6 -5.95286 | AATAAGAGTTTTTAT TTTT ATC AAAA TTTTTTATTTTTAAT CD3310 3876422 - 3875484 - | putative D-isomer specific 2-hydroxyacid dehydrogenase CD3311 3876946 - 3876524 - | hypothetical protein TERM 4221 3877588 - 3877558 - g 74 -6.9 -4.24342 | opp_overlap 3877564 GGTTTGATGAAGAAA GCAAAGGAAAAGC TTTGG GCTTTGCTTTTGC TGGTGGTTCTATTGG CD3312 3877134 - 3878417 + | transporter TERM 4222 3878485 - 3878453 - T 82 -5.8 -5.58179 | gap 1, opp_overlap 3878453 TATTATAATAAAAAA GATGGAGCTTTTAAT CATA AATAAAA-CTCCATC TTTTTTATATTACAA TERM 4223 3878453 - 3878485 + T 82 -5.8 -5.47159 | gap 1, opp_overlap 3878453 TATTATAATAAAAAA GATGGAGCTTTTAAT CATA AATAAAA-CTCCATC TTTTTTATATTACAA hydN1 3879010 - 3878495 - | electron transport protein hydA 3880395 - 3879010 - | hydrogenase hydN2 3880962 - 3880411 - | electron transport protein CD3315A 3881193 - 3881020 - | hypothetical protein fdhD 3881962 - 3881204 - | formate dehydrogenase accessory protein fdhF 3884230 - 3882086 - | formate dehydrogenase H CD3319 3885539 - 3884481 - | hypothetical protein TERM 4224 3885654 - 3885692 + r 100 -12.2 -4.10855 | opp_overlap 3885654 GTCATTTACAAAAAA TATTAATCTATAAATTAA ATT TTAATATATAGATTAATA TTTTACAAACATTTT TERM 4225 3885692 - 3885654 - R 100 -12.2 -5.28176 | opp_overlap 3885654 GTCATTTACAAAAAA TATTAATCTATAAATTAA ATT TTAATATATAGATTAATA TTTTACAAACATTTT CD3320 3886409 - 3885750 - | two-component response regulator CD3321 3886696 - 3887349 + | hypothetical protein CD3322 3887417 - 3888250 + | hypothetical protein TERM 4226 3888308 - 3888280 - T 100 -10.5 -5.28755 | opp_overlap 3888280 AAACATATTAAAAAA TAGTGGCTTTAAA TTT TTTAAAGTCACTA TTTTTTTAAATGATG TERM 4227 3888280 - 3888308 + T 100 -12.7 -5.48825 | opp_overlap 3888280 AAACATATTAAAAAA TAGTGGCTTTAAA TTT TTTAAAGTCACTA TTTTTTTAAATGATG CD3323 3888931 - 3888356 - | hypothetical protein TERM 4228 3889187 - 3889220 + r 100 -14.1 -2.7927 | opp_overlap 3889187, overlap 3889184 TTTATCAAAAGAAAA TGAGCCAGTATAATT ATAA AACTATACTGGCTCA TCCTTAGATATCTTT TERM 4229 3889220 - 3889187 - R 100 -16.3 -5.13722 | opp_overlap 3889184 3889187 TTTATCAAAAGAAAA TGAGCCAGTATAATT ATAA AACTATACTGGCTCA TCCTTAGATATCTTT CD3324 3889502 - 3889224 - | hypothetical protein CD3325 3890572 - 3889811 - | hypothetical protein TERM 4230 3890696 - 3890726 + r 73 -5.5 -4.85918 | opp_overlap 3890697, overlap 3890691 3890697 AATCATTCTTAAAAA AGCTCCTAATATC AATAC GATATTAGAAGCC TTTTCTTATCTAATC TERM 4231 3890725 - 3890697 - R 100 -11.9 -5.03715 | opp_overlap 3890696 3890691 3890697 ATCATTCTTAAAAAA GCTCCTAATATCA ATA CGATATTAGAAGC CTTTTCTTATCTAAT TERM 4232 3890697 - 3890725 + r 79 -9 -3.50466 | opp_overlap 3890697, overlap 3890696 3890691 ATCATTCTTAAAAAA GCTCCTAATATC AATAC GATATTAGAAGC CTTTTCTTATCTAAT TERM 4233 3890853 - 3890890 + r 100 -12.2 -5.10163 | opp_overlap 3890855 TGAATAGTTGGAGCA GAGCTTCAAAGCCTTT ATTTTC AAGGGTTTTGAGGCTC TTTTCTTTTAGAATT TERM 4234 3890905 - 3890919 + r 73 -2.8 -5.80364 | opp_overlap 3890905 CTTTTCTTTTAGAAT TGCATT TTG ATTGCA TTTTTTTATTCAACT CD3326 3892109 - 3890925 - | integrase CD3327 3892340 - 3892146 - | hypothetical protein TERM 4235 3892860 - 3892907 + r 79 -8.5 -4.1851 | overlap 3892806 3892861 TTTAATAGACTGGCA AGCTCTGTCTG-GGAAGCATGGG TTTG TCCACGCTTCCACAGGC-GAGCG TTATTTCTAGTTTGG TERM 4236 3892861 - 3892906 + r 90 -12 -3.10022 | overlap 3892806 3892860 TTAATAGACTGGCAA GCTCTGTCTG-GGAAGCATGGG TTTG TCCACGCTTCCACAGGC-GAGC GTTATTTCTAGTTTG CD3328 3893153 - 3892914 - | hypothetical protein CD3329 3893572 - 3893150 - | hypothetical protein TERM 4237 3893710 - 3893764 + H 100 -11 -4.22949 | opp_overlap 3893721, overlap 3893713 3893721 AAAAACTTTTTCTTC CAACTAAAAAAGCACGCAAACAGA CGATATT TCTGTTTGTGTGCTTTGATAGTTC TTTCTATGTATTCTG TERM 4238 3893713 - 3893761 + H 100 -12.7 -4.21184 | opp_overlap 3893721, overlap 3893710 3893721 AACTTTTTCTTCCAA CTAAAAAAGCACGCAAACAGA CGATATT TCTGTTTGTGTGCTTTGATAG TTCTTTCTATGTATT TERM 4239 3893753 - 3893721 - H 100 -10.7 -5.26875 | opp_overlap 3893721 3893713 3893710 CTTCCAACTAAAAAA GCACGCAAACAGA CGATATT TCTGTTTGTGTGC TTTGATAGTTCTTTC TERM 4240 3893721 - 3893753 + H 100 -12.9 -3.90738 | opp_overlap 3893721, overlap 3893713 3893710 CTTCCAACTAAAAAA GCACGCAAACAGA CGATATT TCTGTTTGTGTGC TTTGATAGTTCTTTC TERM 4241 3893982 - 3893956 - H 100 -8.7 -5.04249 | opp_overlap 3893961 TCTGGAAAAAAGAAA GACGGCGGCTT TTGTC AAACCGTCGTC TGGAAAGATTTATGA TERM 4242 3894254 - 3894239 - g 72 -4 -5.03145 | gap 1, overlap 3894228 3894241 GAAGCCCGTAAAAAA CA-GGGT TTG ACCCGTG AACAGGTGGGAGCAA TERM 4243 3894251 - 3894241 - g 72 -6.8 -4.13963 | overlap 3894228 3894239 AGCCCGTAAAAAACA GGGT TTG ACCC GTGAACAGGTGGGAG CD3330 3894170 - 3894526 + | putative transposon-related DNA-binding protein TERM 4244 3894512 - 3894535 + T 78 -6 -5.04733 | opp_overlap 3894512 GTCAAATCTAAGGAA GTGGGGGA AATGTAAA TCCTCCAC TTTTGTTTATAATTG CD3331 3895254 - 3894559 - | hypothetical protein TERM 4245 3894660 - 3894645 - G 74 -5.4 -4.87008 | opp_overlap 3894645 AATATATAAAAGAAA CTCTGG TTGC CCAAAG TCCTTCCTGACGTAC TERM 4246 3895309 - 3895297 - H 74 -4.9 -5.2015 | opp_overlap 3895297 3895295 3895301, overlap 3895301 TGAATAACATAAAAA CTAAT TAC ATTAG TAATTTTAAATATTG CD3332 3895428 - 3896003 + | TetR family transcriptional regulator CD3333 3896015 - 3896260 + | hypothetical protein TERM 4247 3896301 - 3896324 + F 100 -8.2 -5.4505 | opp_overlap 3896301 ATCCATACATACAAA GCAGTTAGTC TTAG GATTGACTGC TTTTTTCTTACCAAA CD3333A 3896476 - 3896733 + | hypothetical protein TERM 4248 3897089 - 3897064 - g 72 -4.1 -5.01546 | overlap 3897066 3897068 AAACTTATAGAAAAA TTTATCAGGAA ATTA TTCCTAATACA CCATATACCCCTATA CD3334 3896730 - 3897200 + | hypothetical protein TERM 4249 3897228 - 3897251 + T 85 -8.2 -4.56597 | opp_overlap 3897228 ATCCATACACACAAA GCAGTTAGTC TTAG GATTGACTGC TTTTTAAAAAGACAC TERM 4250 3897451 - 3897501 + T 86 -11.5 -2.62439 | gap 1, opp_overlap 3897457 3897463, overlap 3897463 TTAAAAAGAGATACT TTATAAGAGAAACGTGCAAATCTC AAAT GAGAAATGCACGTTTTTC-TATAA CTATTTCACAATCTT TERM 4251 3897496 - 3897457 - T 90 -10.8 -3.36202 | opp_overlap 3897451 3897463, overlap 3897463 AGAGATACTTTATAA GAGAAACGTGCAAATCTC AAAT GAGAAATGCACGTTTTTC TATAACTATTTCACA TERM 4252 3897490 - 3897463 - T 80 -8.4 -4.27519 | opp_overlap 3897451 3897463, overlap 3897457 ACTTTATAAGAGAAA CGTGCAAATCTC AAAT GAGAAATGCACG TTTTTCTATAACTAT TERM 4253 3897463 - 3897490 + T 91 -8.4 -4.99638 | opp_overlap 3897463 3897457, overlap 3897451 ACTTTATAAGAGAAA CGTGCAAATCTC AAAT GAGAAATGCACG TTTTTCTATAACTAT CD3335 3898410 - 3897502 - | hypothetical protein CD3336 3899431 - 3898427 - | putative cell wall hydrolase TERM 4254 3899067 - 3899097 + g 72 -9 -3.0082 | overlap 3899066 CCCTTTGTTTCTGCC GCTGCGAGCAGTTC CGA GAAATACTTGCAGC CTTGTTTGATGGATT CD3337 3901809 - 3899428 - | conjugative transposon membrane protein TERM 4255 3901753 - 3901795 + g 71 -5.5 -4.48583 | opp_overlap 3901745 3901770, overlap 3901754 3901755 AAAAGAGTTTTGTCC CTTTGTCCGGCAAGGGACA AGAGC TGTCCCCTGCTGGATGGGC TTTCTTATCTTCATT TERM 4256 3901754 - 3901794 + g 74 -9 -3.27523 | opp_overlap 3901745 3901770, overlap 3901753 3901755 AAAGAGTTTTGTCCC TTTGTCCGGCAAGGGACA AGAGC TGTCCCCTGCTGGATGGG CTTTCTTATCTTCAT TERM 4257 3901755 - 3901793 + g 78 -10.3 -2.55429 | opp_overlap 3901745 3901770, overlap 3901754 3901753 AAGAGTTTTGTCCCT TTGTCCGGCAAGGGACA AGAGC TGTCCCCTGCTGGATGG GCTTTCTTATCTTCA CD3338 3904259 - 3901806 - | hypothetical protein TERM 4258 3903022 - 3903004 - G 81 -10.3 -3.14878 | overlap 3903002 GCCCCGAAGCCAAGA CCAGCGA GGAAG TCGCTGG TGACATACTGGATGT TERM 4259 3903938 - 3903927 - G 73 -3.6 -5.28826 | overlap 3903929 AAAGCCGATAAAAAA GCGG TAGT CCAC CTGATTTTCCCCTAT TERM 4260 3904077 - 3904101 + g 70 -6.4 -4.09685 | gap 1 TTCGGTGCTGATTTG CAGGG-CGTGA ATCT TCCCGTCCCTG TTTTGGGCGATAAGC CD3339 3904635 - 3904243 - | conjugative transposon membrane protein TERM 4261 3904679 - 3904658 - R 83 -9.3 -3.63744 | overlap 3904656 3904659 GTCCTTTCTAAAAGA TGGGGCAGC AAAA GCCGCCCCT GAATAAAAAATCCGC TERM 4262 3904678 - 3904659 - R 91 -12.8 -2.78032 | overlap 3904658 3904656 TCCTTTCTAAAAGAT GGGGCAGC AAAA GCCGCCCC TGAATAAAAAATCCG TERM 4263 3904723 - 3904690 - R 100 -8.1 -5.4505 | overlap 3904691 CCCCTGAATAAAAAA TCCGCCTGCATTTCC CAAA GGAGATACAGACGGG TCTACCGTAAGATTT TERM 4264 3904722 - 3904691 - R 100 -11.6 -3.86307 | overlap 3904690 CCCTGAATAAAAAAT CCGCCTGCATTTCC CAAA GGAGATACAGACGG GTCTACCGTAAGATT CD3340 3905222 - 3904725 - | putative conjugative transposon antirestriction protein TERM 4265 3905772 - 3905800 + r 90 -7.5 -4.91511 | opp_overlap 3905772 TCTTAGAACAAAAAA TGGCAACTAAC TTTGTTT GTCAGTTGCCA TTTTTCTAATAAAAT TERM 4266 3905800 - 3905772 - R 100 -9.7 -5.55769 | opp_overlap 3905772 TCTTAGAACAAAAAA TGGCAACTAAC TTTGTTT GTCAGTTGCCA TTTTTCTAATAAAAT CD3342 3906312 - 3905806 - | putative phage membrane protein CD3342A 3906719 - 3906498 - | hypothetical protein CD3343 3907751 - 3906771 - | putative conjugative transposon replication initiation factor TERM 4267 3908012 - 3907977 - R 83 -7 -5.00616 | CTCCTGTCTAAAAAA GCGTATGTCAAC TTTCAGAGCCTT GTTGACACACGC CGGATATGGGAAAAT CD3344 3909543 - 3908146 - | conjugative transposon-related FtsK/SpoIII-relatd protein TERM 4268 3908197 - 3908209 + g 91 -4.8 -5.85425 | CTGCACTCCCTGCCT GCTG TCTGT CAGC TTTTTTATTTCTTTG CD3345 3909956 - 3909579 - | hypothetical protein CD3346 3910292 - 3909978 - | hypothetical protein TERM 4269 3910451 - 3910428 - H 75 -3.8 -5.60993 | overlap 3910430 TTTGGGATAAAAAAA TAGACGCCCA GTTT TGAACGTCTT TGTATAATGGTAGAA TERM 4270 3910449 - 3910430 - H 75 -6.4 -4.45201 | overlap 3910428 TGGGATAAAAAAATA GACGCCCA GTTT TGAACGTC TTTGTATAATGGTAG CD3347 3910549 - 3911223 + | hypothetical protein CD3348 3911224 - 3912117 + | hypothetical protein TERM 4271 3912170 - 3912147 - T 100 -10.4 -5.33405 | opp_overlap 3912151 TTTATGAAAGAAAAA TAGACGCTCA TTTC TGAACGTCTA TAGAGGAAAGATATT TERM 4272 3912228 - 3912242 + T 82 -2.8 -6.17033 | TGGATGTACTTCGAT TGCATT TTT ATTGCA TTTTTTATTTTTTTT bclA3 3914301 - 3912316 - | putative exosporium glycoprotein TERM 4273 3914036 - 3914058 + g 93 -12 -3.06315 | overlap 3914035 3914039 CCTGTATTTCCTGTT GGACCAGTCG GAC CGGTTGGTCC TGTTGGGCCTGTTGC CD3350 3915444 - 3914368 - | putative glycosyl transferase TERM 4274 3914999 - 3914980 - G 82 -7.2 -4.78839 | opp_overlap 3914979 AATGTCAGAATAAAA TACCTCTC CAAA AAGAGGTA CTACTTCATGAATAG TERM 4275 3915696 - 3915658 - R 100 -7.7 -5.37043 | gap 1, opp_overlap 3915658 ATTTCATACAAAAAA GAGTGTCCCATAAATTAA AAAG TTCATTT-TGAGACACTC TTATTTAATATTATA clpP2 3916340 - 3915756 - | ATP-dependent Clp protease proteolytic subunit CD3352 3916819 - 3916337 - | AraC family transcription regulator CD3353 3918433 - 3917018 - | GntR family transcriptional regulator TERM 4276 3918740 - 3918720 - g 95 -7.7 -5.64421 | opp_overlap 3918719 3918720, overlap 3918731 ATCGCAAAGAAAAAA TTAAAACAG AGC CTGTTTCAA GTTATATAAAGTATT CD3354 3918548 - 3919216 + | hypothetical protein CD3355 3919911 - 3919393 - | putative nitroreductase CD3356 3920063 - 3920386 + | putative transcriptional regulator CD3357 3920975 - 3920391 - | putative protease TERM 4277 3920729 - 3920710 - G 76 -5 -5.13473 | ATTAGATTTAAAAAA GATGAATC ATAT GCTTCATC ATAAAATCCAAATTC CD3358 3921485 - 3921024 - | transcription regulator AsnC TERM 4278 3922125 - 3922141 + H 80 -9.5 -3.12895 | overlap 3922124 TGTAGAGGTTAATCT GAAAGCT TAA AGCTTTC TATCTTCATCGGCAA TERM 4279 3922232 - 3922261 + H 100 -13.8 -5.26119 | TAATATAGATTTTCT GGTCATAGACAA CAATGC TTGTCTATGACC TTTTGTTTTTCCAAA TERM 4280 3922312 - 3922278 - H 93 -10.1 -4.07568 | gap 1, opp_overlap 3922278 TTTGTTTTTCCAAAA GCAGAGG-TCGGCATT TTAC AATGCCATTCCTCTGC TTTTTTTATTTCCAT TERM 4281 3922278 - 3922312 + H 100 -7.9 -5.96894 | gap 1, opp_overlap 3922278 TTTGTTTTTCCAAAA GCAGAGG-TCGGCATT TTAC AATGCCATTCCTCTGC TTTTTTTATTTCCAT TERM 4282 3923481 - 3923494 + G 72 -6.7 -4.08064 | ATATTCCTCGTATAT CTGGA GATT TCCAG TTTTCAGAACAAGTT CD3359 3922361 - 3923899 + | ABC transporter, ATP-binding protein TERM 4283 3924035 - 3924063 + T 78 -8.3 -3.89957 | gap 1, opp_overlap 3924034 3924037 3924052 GGATATAAACTTAAT GAGG-CTATCTC AAAATA GAGATAGACCTC TTCTTCATTGTTGAG CD3360 3924884 - 3924171 - | two-component system response regulator TERM 4284 3924233 - 3924250 + g 76 -2.7 -5.53436 | TAAGTATTTTAGGAT TTGAGGG GTTA TCTTCAA TTTTTTCTCTTATAT CD3361 3926711 - 3925332 - | putative multidrug efflux protein TERM 4285 3926429 - 3926443 + g 73 -8.6 -3.16564 | opp_overlap 3926441 CATTTCCCATCTTAC GTGCTA CAA TAGCAC TTCCTCCAGTGGCAA CD3362 3927775 - 3926996 - | ABC transporter, permease protein TERM 4286 3927369 - 3927385 + g 76 -9.5 -3.12327 | opp_overlap 3927367 3927363, overlap 3927367 ATAACTAAAGTTATC TCTGAGT TTA ACTCAGA TATTCCATATAAAAC CD3363 3928605 - 3927787 - | ABC transporter, permease protein CD3364 3929623 - 3928628 - | ABC transporter, ATP-binding protein TERM 4287 3929026 - 3929040 + g 70 -4.3 -4.87389 | TTTCATTTACTTCTT TTAGG AAATA CCTAA TTTGTTTTTGGGCTA TERM 4288 3929082 - 3929102 + g 81 -9.9 -3.48395 | CCTATAGTTGGTTCA TCCAAAAAT AAT ATTTTTGGA TTATGTAGAAGGGCT TERM 4289 3929823 - 3929798 - H 76 -6.2 -4.90918 | ACAAAATTAATAAAA GTGTAGCAGA TTAAAG CCTACTACAC CATAATTTAACAAAG TERM 4290 3929933 - 3929909 - H 70 -3.7 -5.1383 | overlap 3929914 AATAAGACACAAAAA TTAAATGTATT AAA AATACACTTGA AATTTCTGATTATAC CD3365 3930326 - 3931282 + | putative signaling protein TERM 4291 3931566 - 3931581 + T 82 -5.4 -5.52347 | opp_overlap 3931566 AAAAACACTTAGAAA GGCTTT ATAA AGAGCC TTTTTTGCTTTTATT TERM 4292 3931663 - 3931648 - T 83 -4 -5.9003 | gap 1 AAATCAATAAAAAAA GGC-TCT ATA AGAAGCC TCCCCCTATTTTTAT CD3366 3932565 - 3931675 - | hypothetical protein CD3367 3933441 - 3932743 - | hypothetical protein TERM 4293 3933053 - 3933075 + g 70 -4.2 -4.85267 | overlap 3933056 3933063 TCAATTTTTTCATTA GACTCTTTAG TGA TTAAAGATTC TTTTTCATCATTTGT CD3368 3935035 - 3933977 - | putative GTPase CD3368A 3935442 - 3935041 - | hypothetical protein TERM 4294 3936332 - 3936352 + H 86 -7.7 -4.86033 | ATGTCAGCCAGTTGC CAAAAAGAG ATA TTCTTTTTG TTTTTATGAAAGTTT CD3369 3936975 - 3937613 + | hypothetical protein TERM 4295 3937695 - 3937740 + T 100 -18 -4.67635 | opp_overlap 3937695 TAAATTGTCTGGAAA TCACCTCTTCATTTGTTATA AAAACA TACAACAAATGAAGAGGTGA TTTTATGGTTTTAAA TERM 4296 3937740 - 3937695 - T 100 -20.2 -3.54935 | opp_overlap 3937695 TAAATTGTCTGGAAA TCACCTCTTCATTTGTTATA AAAACA TACAACAAATGAAGAGGTGA TTTTATGGTTTTAAA TERM 4297 3938036 - 3938006 - T 81 -9.1 -3.84266 | overlap 3938020 ACATTGTAGACTAAA TTTGCCACCGAAA TCGCT TTACAGTGGCAAA TCGGTGGCAAATACA CD3370 3939862 - 3938102 - | putative conjugative transposon recombinase TERM 4298 3939816 - 3939830 + g 71 -5.8 -4.49531 | GCTTTACCACGGGCT TGTTTT GAC AAAACA TTTCTTGCTTTTATT CD3370A 3940626 - 3940387 - | putative conjugative transposon excisionase CD3371 3941047 - 3940631 - | conjugative transposon protein CD3372 3941403 - 3941044 - | hypothetical protein TERM 4299 3941106 - 3941081 - G 72 -7.7 -3.5936 | overlap 3941072 GCGAAAGTTGCTAAA GCGAAAAGA CTTCTACC TCTTTTCGC ACTAACACTCACCGT TERM 4300 3941217 - 3941184 - G 100 -8.9 -5.1675 | opp_overlap 3941212 TTATGCAGTAAAAAA GCACAAGGGCAATAC AGAC GTACTGATCTTGTGC TAAACAAATTATTCC TERM 4301 3941436 - 3941407 - R 83 -7.9 -4.67011 | opp_overlap 3941410 3941412, overlap 3941412 AACGTTAGGCAAAAA TAAAACGGCGGCT ATAT AACCGTCGTCTTA TTCAAAAGTTCAAAA TERM 4302 3941431 - 3941412 - R 81 -5.6 -5.2853 | opp_overlap 3941410 3941412, overlap 3941407 TAGGCAAAAATAAAA CGGCGGCT ATAT AACCGTCG TCTTATTCAAAAGTT TERM 4303 3942404 - 3942417 + r 73 -2.3 -5.73563 | opp_overlap 3942404, overlap 3942392 ATATCTTATTTATAA GACTC TTTT GTGTC TTTTTTTGGTTTCAT mgtB 3945339 - 3942574 - | magnesium transporting ATPase, P-type TERM 4304 3943058 - 3943043 - G 82 -7.6 -4.51378 | ATCCAGATCATAAAA CTTCCA ACAC TGGAAG CGTCCCATTTACGAG TERM 4305 3943953 - 3943963 + g 71 -6.8 -3.87104 | CTTTTGTTACCATCT GGGT CTT ACCC TTATTATCCTGTACC TERM 4306 3945213 - 3945231 + g 80 -9 -3.76759 | opp_overlap 3945216, overlap 3945216 CACGAAGTGTGGTAT GAAGTTTT TTT AAAACTTC TTTAATAGGATTGGT CD3374 3945816 - 3945505 - | hypothetical protein TERM 4307 3945602 - 3945588 - G 76 -8.6 -3.39018 | overlap 3945586 CGATTATTGCAAATA CAAACC AGT GGTTTG AAAATCCCGGCAAAA CD3374A 3946062 - 3945832 - | hypothetical protein mgtC 3946749 - 3946063 - | magnesium transporting ATPase protein C TERM 4308 3946875 - 3946838 - R 93 -9.2 -4.63932 | opp_overlap 3946840, overlap 3946840 GATTTGGTAAGAAAA TAGACGGACTGAAACC GAAAAT GGTCTTAGTCCGTCTT TGTCATATCTGATCA TERM 4309 3946873 - 3946840 - R 100 -11.8 -3.93367 | opp_overlap 3946840, overlap 3946838 TTTGGTAAGAAAATA GACGGACTGAAACC GAAAAT GGTCTTAGTCCGTC TTTGTCATATCTGAT TERM 4310 3946840 - 3946873 + r 100 -12.5 -4.04719 | opp_overlap 3946838 3946840 TTTGGTAAGAAAATA GACGGACTGAAACCG AAAA TGGTCTTAGTCCGTC TTTGTCATATCTGAT CD3376 3947384 - 3946878 - | putative transcriptional regulator mgtA 3950060 - 3947397 - | magnesium transporting ATPase, P-type 1 TERM 4311 3947535 - 3947523 - G 71 -6.9 -3.9392 | CGTCAGTCCAAACAA CGACG CAC CGCCG ACAAATGTAAGGGAA CD3378 3950362 - 3950153 - | hypothetical protein TERM 4312 3950835 - 3950808 - R 71 -5.6 -4.63486 | gap 1, opp_overlap 3950808, overlap 3950795 ATGCTCTTAACAAAA GCGTGCAAATTCC TAA AGAAA-TGCACGC TTTCAATAATTATCC CD3379 3951756 - 3950845 - | conjugative transposon protein CD3380 3952771 - 3951764 - | putative cell wall hydrolase TERM 4313 3952442 - 3952414 - G 100 -12.5 -4.24342 | opp_overlap 3952414 3952441 TTTTGCAGGAAGAAA GCAGGGACGCAAA ATA TTTACACCCCTGC TTGATTGAGCTTTCC CD3383 3957419 - 3954969 - | conjugative transposon protein TERM 4314 3957014 - 3957026 + g 71 -3.3 -5.31545 | overlap 3956979 3956979 GAAATTCCTTGAACG TCAGC CAC GCCGA TTTTTTGATGTTCTT TERM 4315 3957101 - 3957090 - G 81 -3.6 -5.52096 | AAAGCCAAGAAAAAA GCGG TAGT CCAC TTGATTGTCCCCAAT TERM 4316 3957374 - 3957390 + g 71 -7.3 -3.8397 | CGAACACCTCATTGT CCTTGTT CCA GACAAGG TTGTTGTCAATATAT CD3384 3957795 - 3957397 - | conjugative transposon membrane protein TERM 4317 3957857 - 3957834 - R 80 -8.2 -4.35524 | gap 1 TTTCTAAATGGAAAA GGACAGCCATG TTT CA-GACTGTCC CGTAAAGAGAAATAC CD3385 3958416 - 3957913 - | conjugative transposon protein CD3386 3958937 - 3958434 - | conjugative transposon protein TERM 4318 3959211 - 3959188 - R 100 -8.2 -5.4833 | opp_overlap 3959188 TTAGGTAAGAAAAAA GCAGTCAATC CTAA GACTAACTGC TTTATGTGTAAGTAT CD3387 3960044 - 3959235 - | hypothetical protein TERM 4319 3959532 - 3959517 - G 75 -4.8 -5.08824 | CTTGTATGGAAAAAA GAAAAA TAAG TTTTTC TTGAAAGTAAGCAAT CD3387A 3960304 - 3960083 - | conjugative transposon protein CD3388 3961641 - 3960451 - | putative conjugative transposon replication initiation factor TERM 4320 3961763 - 3961785 + r 84 -9.1 -4.21194 | opp_overlap 3961763 3961760 CTATTTGTAAACGTA CCCCTCTGT TAGAT ACCGAGGGG TTTTACCTGCTGGCG TERM 4321 3961785 - 3961763 - R 72 -9.1 -2.64803 | opp_overlap 3961763, overlap 3961760 CTATTTGTAAACGTA CCCCTCTGT TAGAT ACCGAGGGG TTTTACCTGCTGGCG CD3389 3963219 - 3961825 - | putative conjugative transposon FtsK_SpoIIIE-related protein TERM 4322 3962158 - 3962174 + g 74 -5.1 -4.90778 | GAAATAACCTGCTTG TCGTCCT AAC ATGACGA TTTTCTTTAACTGGC TERM 4323 3962871 - 3962824 - G 83 -10.8 -2.90992 | gap 1, opp_overlap 3962824 3962823 3962826, overlap 3962821 3962826 AATCTTTGGAAACCA GACGATTTTTTCCCTTGATCTGC TTT GCAGGTCA-GTAAAAAAACCGTC GTCTTGTATGGTATC TERM 4324 3962824 - 3962871 + g 70 -8.6 -2.61334 | gap 1, opp_overlap 3962821 3962824 3962826, overlap 3962823 3962826 AATCTTTGGAAACCA GACGATTTTTTCCCTTGATCTGC TTT GCAGGTC-AGTAAAAAAACCGTC GTCTTGTATGGTATC TERM 4325 3963009 - 3962984 - G 85 -8.3 -4.67943 | CGGTAATACAGAAAA GCGACTAATGC ACAA ACACCAGTCGC TATCAGTACGGTTAT CD3390 3963619 - 3963236 - | conjugative transposon protein CD3391 3963961 - 3963635 - | conjugative transposon protein CD3391A 3964187 - 3963993 - | hypothetical protein CD3392 3967244 - 3964200 - | putative collagen-binding surface protein TERM 4326 3964889 - 3964869 - G 74 -8.3 -3.58801 | ATACAATTCTTCAAA GGTAACAAG GTT CTTGCCACC TAAAGCAGACGCATT TERM 4327 3965448 - 3965486 + g 76 -9.6 -2.75993 | opp_overlap 3965477, overlap 3965447 3965444 ATGACTTTCCCCAGT CGTCTTACTTGTGATCCT AAA AGGAACATCAGCAAGACG CTTGTGTGTGCCTGC TERM 4328 3967302 - 3967279 - R 74 -6 -4.63218 | opp_overlap 3967281, overlap 3967281 TTTTGGGTAATAAAA TAGACGCTCA TTAC TGAACGTCTT ACATTGAAAAGGGAT TERM 4329 3967300 - 3967281 - R 78 -8.6 -3.93367 | opp_overlap 3967281, overlap 3967279 TTGGGTAATAAAATA GACGCTCA TTAC TGAACGTC TTACATTGAAAAGGG CD3393 3968851 - 3967487 - | putative RNA methyltransferase TERM 4330 3969000 - 3968984 - R 100 -8.7 -6.15828 | opp_overlap 3968984 TTTACCAAAAAAAAA GGAGCTT ATA AAGCCCC TTAGTAAATAAATTT pykF 3970786 - 3969026 - | pyruvate kinase pfkA 3971797 - 3970838 - | 6-phosphofructokinase TERM 4331 3971922 - 3971962 + r 100 -9.9 -4.93316 | opp_overlap 3971925, overlap 3971924 3971925 AAATTAAATGTCCTT AAATGTCCATTTTGTGATA TTA TATCACAAAACGGACAATA TTTTTCATATTATTA TERM 4332 3971924 - 3971960 + r 100 -12.5 -4.06487 | opp_overlap 3971925, overlap 3971922 3971925 ATTAAATGTCCTTAA ATGTCCATTTTGTGATA TTA TATCACAAAACGGACAA TATTTTTCATATTAT TERM 4333 3971959 - 3971925 - R 100 -18.2 -3.56594 | opp_overlap 3971925 3971924 3971922 TTAAATGTCCTTAAA TGTCCATTTTGTGATA TTA TATCACAAAACGGACA ATATTTTTCATATTA TERM 4334 3971925 - 3971959 + r 100 -16 -3.02265 | opp_overlap 3971925, overlap 3971924 3971922 TTAAATGTCCTTAAA TGTCCATTTTGTGATA TTA TATCACAAAACGGACA ATATTTTTCATATTA dnaE 3975575 - 3972006 - | DNA polymerase III DnaE TERM 4335 3975097 - 3975110 + g 74 -5.3 -4.85267 | opp_overlap 3975097 TCTCTGTAGTCAAGA GCAAA TTGT TTTGC TTTTTCATAATTTCT CD3397 3976688 - 3975732 - | hypothetical protein CD3398 3977121 - 3976696 - | putative DNA repair protein (nucleotide pyrophosphatase) CD3399 3978308 - 3977190 - | hypothetical protein TERM 4336 3978193 - 3978213 + g 88 -5.5 -5.59502 | TCAACAATAGACCTT TGAAATAGT TTT ACTTTTTCA TTTTTTGCTTTTTTA TERM 4337 3978313 - 3978335 + r 72 -7.8 -3.60502 | opp_overlap 3978319, overlap 3978317 TTTGCCTCCATTATC GCAACATAGA GTC TCTATGTTTC TTTACAACTCTATAT TERM 4338 3978317 - 3978331 + r 77 -7.2 -4.43208 | opp_overlap 3978319, overlap 3978313 CCTCCATTATCGCAA CATAGA GTC TCTATG TTTCTTTACAACTCT CD3400 3979165 - 3978308 - | hypothetical protein CD3401 3979909 - 3979196 - | putative phosphoesterase murB 3980827 - 3979913 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 4339 3981068 - 3981044 - R 100 -8.7 -5.57054 | opp_overlap 3981044 3981066 AATAATTTAAAAAAA GCATCAATATC ACT GATATCAATGC TTTAAAAGGCAATTT CD3403 3981870 - 3981100 - | putative formate/nitrite transporter TERM 4340 3981550 - 3981569 + g 81 -3.7 -5.64274 | CAGTCCCCAGTTTCT TAACATT TTTCCT AATGTTA TTTTTTTGTCCATAA TERM 4341 3981981 - 3981971 - H 70 -2.6 -5.49569 | opp_overlap 3981971 3981976 3981976, overlap 3981976 TATTAACATAAAAAA TATA CTA TATA CTTATATATACTTGT cls 3982188 - 3983669 + | putative cardiolipin synthetase TERM 4342 3984134 - 3984122 - g 70 -6.3 -4.10657 | opp_overlap 3984121 GGATATCTTCCAAAA GAAGT TCA ACTTC ATGTTGCTAGAAAAC hymA 3983987 - 3984484 + | putative iron-only hydrogenase,electron-transferring subunit TERM 4343 3984555 - 3984534 - g 71 -5.9 -4.45544 | opp_overlap 3984533 TTTGATGAATTAAAA GTTTTAGCT GATG AGCTGAAAC CTAATCTTAGCTTAA hymB 3984501 - 3986387 + | putative iron-only hydrogenase,electron-transferring subunit hymC 3986410 - 3988191 + | putative iron-only hydrogenase, catalytic subunit TERM 4344 3988225 - 3988264 + T 100 -13.9 -3.89354 | opp_overlap 3988225 TTTATTCTTAAAAAA GGATTGTCTTAAAATAC TTTTAC GTAATTTAAGACAATCC TTATTAATTTCACAA TERM 4345 3988264 - 3988225 - T 100 -13.9 -5.03314 | opp_overlap 3988225 TTTATTCTTAAAAAA GGATTGTCTTAAAATAC TTTTAC GTAATTTAAGACAATCC TTATTAATTTCACAA CD3408 3990139 - 3988331 - | putative DNA mismatch repair protein hprK 3991270 - 3990341 - | HPr kinase/phosphorylase uvrC 3993087 - 3991270 - | excinuclease ABC subunit C uvrA 3996171 - 3993346 - | excinuclease ABC subunit A uvrB 3998160 - 3996190 - | excinuclease ABC subunit B TERM 4346 3998313 - 3998289 - R 100 -8 -5.9362 | opp_overlap 3998289 3998291 TAAAACATAAAAAAA GACTTCTATC TTTGC AATAGAAGTC TATAATTCATGGAAA CD3413 3999609 - 3998347 - | putative nucleotide pyrophosphatase TERM 4347 3999389 - 3999399 + g 70 -4 -4.94972 | TCTTTATTTTCTTTA TTTG GGT CAAA TTTTTCATTATGATA CD3414 4000982 - 3999672 - | ABC transporter, solute-binding protein TERM 4348 3999854 - 3999866 + g 78 -4.1 -5.42975 | ATTGGTCAGTTGCAA CCTTA TAT TGAGG TTTTTCTTTATATAA CD3415 4001867 - 4001007 - | ABC transporter, permease protein CD3416 4002780 - 4001911 - | ABC transporter, permease protein TERM 4349 4002432 - 4002394 - G 100 -9.7 -4.62783 | TATCCAGTTTAAAAA GCCATATTGTGGCTCCA TAATC CAAAGCCACAATACAGC TACAGATACTAGTGA CD3417 4003834 - 4002764 - | ABC transporter, ATP-binding protein TERM 4350 4004155 - 4004133 - R 100 -10.7 -5.79595 | opp_overlap 4004133 TTTGAAAATAAAAAA GACCTCTAT GGGGG ATAGAGGTC TTTAAGTGGGGGAGA TERM 4351 4004133 - 4004155 + r 91 -10.7 -3.64703 | opp_overlap 4004133 TTTGAAAATAAAAAA GACCTCTAT GGGGG ATAGAGGTC TTTAAGTGGGGGAGA TERM 4352 4004267 - 4004248 - R 79 -5.2 -5.56264 | opp_overlap 4004241 4004241, overlap 4004241 TTTAAACATAAAAAA TAAAAATT TTTT AATTTTTA TAAATTTACCCAAAA TERM 4353 4004417 - 4004434 + r 73 -5.7 -4.78764 | CACATAATCTTTATG CTTAATA TTTC TATTAAG TTTTTAATAAGTTTA TERM 4354 4004456 - 4004468 + r 72 -6.3 -4.46233 | opp_overlap 4004456 4004455 4004446, overlap 4004452 ATAAGTTTATAGAAC CTAGT AAT ACTAG TTTCTTTAGAGTTAG TERM 4355 4006900 - 4006911 + r 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 4356 4007674 - 4007630 - R 75 -8.2 -3.53091 | gap 1, opp_overlap 4007624, overlap 4007631 ATCCCGTTGCTTAAA GTGCTAATTTTGAGTATTCGT AAAA ACGAACCCTCAAAATTAA-AC AGTAGGTAATTCTCC TERM 4357 4008400 - 4008388 - R 85 -10.5 -3.05463 | AGCTGCGGCACCGAA GGGGG TAA CCCCC GACACCTAGTACTCA TERM 4358 4009043 - 4009058 + r 70 -7.6 -3.41125 | ATTATCCCGTATTAG CATACC TTTC GGTATG TTATCCGTGTGTACA CD3418 4009967 - 4009389 - | putative siroheme synthase hemB 4011091 - 4010120 - | delta-aminolevulinic acid dehydratase hemD 4012610 - 4011102 - | porphyrin biosynthesis protein hemC 4013496 - 4012591 - | porphobilinogen deaminase TERM 4359 4013088 - 4013104 + g 77 -8.1 -3.71308 | TTAAATCAGGTCTTT GTTTCAA TAA TTGAAAC TTCCTTCTTTTACTT cbiK 4015004 - 4013526 - | sirohydrochlorin cobaltochelatase cbiJ 4015775 - 4015023 - | cobalt-precorrin-6a reductase cbiH 4016497 - 4015772 - | cobalt-precorrin-3b c(17)-methyltransferase TERM 4360 4015855 - 4015877 + g 70 -6.4 -4.09864 | TAACCATTGTAGTCA TATCGACTTT TTC AAAGTCCATA TTTTCAAAAGTACAT cbiG 4017615 - 4016494 - | cobalamin biosynthesis protein CbiG cbiF 4018351 - 4017599 - | precorrin-4 C(11)-methyltransferase cbiT 4018919 - 4018344 - | cobalt-precorrin-6Y C(15)-methyltransferase cbiE 4019517 - 4018909 - | cobalt-precorrin-6Y C(5)-methyltransferase TERM 4361 4019443 - 4019463 + g 86 -3.3 -5.9218 | opp_overlap 4019444, overlap 4019444 AATTAATACATCAGA AGTGGAAAT TAA ATTTTCACC TTTTTTTGTTATATA TERM 4362 4019444 - 4019462 + g 72 -6.8 -4.12868 | opp_overlap 4019444, overlap 4019443 ATTAATACATCAGAA GTGGAAAT TAA ATTTTCAC CTTTTTTTGTTATAT cbiD 4020740 - 4019514 - | cobalt-precorrin-6A synthase cbiC 4021381 - 4020749 - | precorrin-8X methylmutase CD3431 4022265 - 4021369 - | putative cobalamin biosynthesis kinase TERM 4363 4021547 - 4021557 + g 88 -4 -5.69023 | GCAATATTTACTCCA TATG CTC CATA TTTTTTTGATATTTT cobD 4023328 - 4022258 - | pthreonine-phosphate decarboxylase TERM 4364 4022285 - 4022295 + g 70 -4 -4.91285 | TAAATTTTTCATATT TTCT ATA AGAA TTTTGTTATCTTCAT cbiB 4024331 - 4023360 - | cobalamin biosynthesis protein TERM 4365 4023622 - 4023634 + g 70 -6.3 -4.09739 | TTATGATTCTTTCTA TCTCT AAT AGAGA TTTTAAAACAGTTCC cbiA 4025747 - 4024332 - | cobyrinic acid a,c-diamide synthase TERM 4366 4025341 - 4025315 - G 78 -10.2 -2.77182 | opp_overlap 4025315 4025318, overlap 4025320 CCTTATATCCAAGTA CCATAGCAGCAC TAG ATGCTGCCATAG ATTTACCATTTATAA TERM 4367 4025336 - 4025320 - G 71 -8.7 -2.8664 | opp_overlap 4025318 4025315, overlap 4025315 TATCCAAGTACCATA GCAGCAC TAG ATGCTGC CATAGATTTACCATT cbiP 4027261 - 4025747 - | cobyric acid synthase CD3436 4028236 - 4027622 - | putative cobalamin biosynthesis phosphoglycerate mutase cobS 4029029 - 4028256 - | cobalamin synthase cobU 4029599 - 4029039 - | bifunctional adenosylcobalamin biosynthesis protein cobT 4030677 - 4029631 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 4368 4031137 - 4031104 - H 90 -12.7 -2.68775 | opp_overlap 4031110, overlap 4031110 TTATTATGAAACCCA TTAAAATAGGGAGTT TAAC AACTCCCTATTTTGA AGTCACAATTTTTTT TERM 4369 4031131 - 4031110 - H 100 -11.7 -4.33165 | opp_overlap 4031110, overlap 4031104 TGAAACCCATTAAAA TAGGGAGTT TAAC AACTCCCTA TTTTGAAGTCACAAT TERM 4370 4031110 - 4031131 + H 100 -11.7 -4.13945 | opp_overlap 4031104 4031110 TGAAACCCATTAAAA TAGGGAGTT TAAC AACTCCCTA TTTTGAAGTCACAAT CD3440 4031482 - 4032354 + | putative aldose epimerase TERM 4371 4032468 - 4032496 + T 95 -12 -3.767 | opp_overlap 4032468 TCCTTAATCAAAAAA TATTACTGGAAT ACAAA ATTCCAGTAATA TTTGATAACTAAATA TERM 4372 4032496 - 4032468 - T 100 -12 -5.26875 | opp_overlap 4032468 TCCTTAATCAAAAAA TATTACTGGAAT ACAAA ATTCCAGTAATA TTTGATAACTAAATA CD3441 4033738 - 4032551 - | putative aminotransferas TERM 4373 4033217 - 4033257 + g 77 -7.2 -4.22524 | gap 1, opp_overlap 4033226 4033229, overlap 4033222 4033226 ACCTGATGGATTTTG TGGACTAC-AGAATATAAG CAAT CTTATATTCTCGTATTTCA TTTGATTTTCCATAT TERM 4374 4033222 - 4033252 + g 79 -7.9 -4.20288 | gap 1, opp_overlap 4033226 4033229, overlap 4033217 4033226 ATGGATTTTGTGGAC TAC-AGAATATAAG CAAT CTTATATTCTCGTA TTTCATTTGATTTTC TERM 4375 4033226 - 4033247 + g 72 -8.9 -2.92386 | opp_overlap 4033226 4033229, overlap 4033222 4033217 ATTTTGTGGACTACA GAATATAAG CAAT CTTATATTC TCGTATTTCATTTGA TERM 4376 4033247 - 4033226 - G 71 -8.9 -2.78463 | opp_overlap 4033226 4033222 4033217, overlap 4033229 ATTTTGTGGACTACA GAATATAAG CAAT CTTATATTC TCGTATTTCATTTGA TERM 4377 4033393 - 4033374 - G 74 -9.4 -2.84015 | opp_overlap 4033373, overlap 4033371 AAAGGGTCATAAGCA GGTGTATT TATC AATACACC CTCTCCTTCTTTAGT CD3442 4034813 - 4033743 - | putative peptidase CD3443 4036145 - 4034823 - | PTS system, IIC component TERM 4378 4035354 - 4035366 + g 70 -6.3 -4.1721 | overlap 4035347 4035346 TGTTTCTCCAGCTTG CATAG CTG CTATG TTTTCAGCTATAAAT TERM 4379 4035824 - 4035811 - G 83 -2.4 -5.84011 | AATAAAAAAGAAAAA GTTG ATAGTG CAAC ACAACCTGGTATATA CD3444 4036512 - 4036177 - | PTS system, IIB component CD3445 4036914 - 4036609 - | PTS system, IIA component celM 4037972 - 4036929 - | exoaminopeptidase TERM 4380 4037681 - 4037705 + g 72 -6.5 -4.32436 | overlap 4037702 TTGTTGTAATTCTAA CTTTTTGTACA AAC TGTGCAAGAGG TTTTACTCCTCCTAT CD3447 4039876 - 4037975 - | putative transcription antiterminator TERM 4381 4040161 - 4040193 + r 100 -8 -5.3658 | opp_overlap 4040161 TTTTCATATAACAAA TATCCTAAACTTAT CTAAA ATAAATTTAGGATA TTTTATTTTTATACT TERM 4382 4040193 - 4040161 - R 100 -10.9 -4.38927 | opp_overlap 4040161 TTTTCATATAACAAA TATCCTAAACTTATC TAA AATAAATTTAGGATA TTTTATTTTTATACT gatY 4041053 - 4040202 - | tagatose-bisphosphate aldolase agaS 4042271 - 4041102 - | putative tagatose-6-phosphate ketose/aldose isomerase TERM 4383 4042229 - 4042241 + g 81 -4.9 -5.34365 | TTGTTATTATTGCAC CTAAA TCT TTTAG TTTTTGTTCTTCTAA CD3450 4042733 - 4043650 + | putative oxidoreductase TERM 4384 4043705 - 4043655 - T 81 -10.4 -2.56656 | gap 1, opp_overlap 4043654 4043667, overlap 4043654 4043667 CAGTAAAATAGATAT TTATTATAAAAATAGGTTAAAAA TGAATT TTTCTAACCTATTTTTAT-ATAA GACTATATCTTTTAT TERM 4385 4043694 - 4043667 - T 80 -6.5 -4.9218 | opp_overlap 4043654 4043667, overlap 4043655 4043654 TATTTATTATAAAAA TAGGTTAAAAA TGAATT TTTCTAACCTA TTTTTATATAAGACT TERM 4386 4043667 - 4043694 + T 70 -4.3 -4.9725 | opp_overlap 4043667 4043655 4043654, overlap 4043654 TATTTATTATAAAAA TAGGTTAAAAA TGAATT TTTCTAACCTA TTTTTATATAAGACT lacC 4044702 - 4043773 - | putative tagatose-6-phosphate kinase TERM 4387 4044815 - 4044782 - H 77 -9.1 -3.36505 | opp_overlap 4044782 4044781 4044784 4044793 ATACCTCATCTATAA TATATCCAAAGTGGT TATT ACCAATTTGAATATA AATTATTTTACTTGT CD3452 4044971 - 4045696 + | GntR family transcriptional regulator agaA 4045779 - 4046933 + | N-acetylglucosamine-6-phosphate deacetylase TERM 4388 4047469 - 4047446 - T 100 -11.8 -4.33928 | opp_overlap 4047446 TATGTTAAATATAAA GCAGAGTAGT TAAA ACTACCCTGC TTTTGTAATTAAAAT TERM 4389 4047446 - 4047469 + T 93 -9.6 -4.54821 | opp_overlap 4047446 TATGTTAAATATAAA GCAGAGTAGT TAAA ACTACCCTGC TTTTGTAATTAAAAT CD3454 4048114 - 4047632 - | putative regulatory protein TERM 4390 4048279 - 4048226 - R 72 -8.1 -3.14284 | gap 1, opp_overlap 4048235, overlap 4048235 GTTTTAGGAATAAAT TATATAAAATAGGTTATAAGATAA TGAACAT TTATATTATAACCTATTTT-TATA TCGATAAGTATGAAA TERM 4391 4048235 - 4048271 + r 80 -6.9 -4.99035 | opp_overlap 4048226 4048235 ATAAATTATATAAAA TAGGTTATAAGATAA TGAACAT TTATATTATAACCTA TTTTTATATCGATAA TERM 4392 4048271 - 4048235 - R 77 -6.9 -4.65584 | opp_overlap 4048235, overlap 4048226 ATAAATTATATAAAA TAGGTTATAAGATAA TGAACAT TTATATTATAACCTA TTTTTATATCGATAA TERM 4393 4048571 - 4048524 - R 72 -5.2 -5.00616 | gap 1, opp_overlap 4048532 4048534, overlap 4048532 TGTGTTTTTAAAAAA TATCA-AAATAAGGCTATGATTT TTA AAACCATAGCCCTATCTATAAAA ATTTAATTATCACTT TERM 4394 4048562 - 4048532 - R 100 -12.8 -4.64361 | opp_overlap 4048532 4048534, overlap 4048524 TAAAAAATATCAAAA TAAGGCTATGATTT TTA AAACCATAGCCCTA TCTATAAAAATTTAA CD3455 4049875 - 4048718 - | putative exported carboxy-terminal processing protease TERM 4395 4049011 - 4049023 + g 74 -3.4 -5.38054 | TAGTTAACACTACTA TTGG AAGTC CCAA TTTTTCTTTATCAGA TERM 4396 4049354 - 4049364 + g 70 -5.4 -4.5366 | TTCTCTTAATATAGT CAGT TCA ACTG TTTTACCTTTTTTAC TERM 4397 4049667 - 4049677 + g 75 -4 -5.252 | opp_overlap 4049664 4049667, overlap 4049664 4049662 CCATTTACCAAATCA GTAT CTG ATAC TTTTTTATAAAAATC CD3456 4050029 - 4050598 + | putative 5-formyltetrahydrofolate cyclo-ligase CD3457 4051196 - 4050780 - | hypothetical protein TERM 4398 4051353 - 4051401 + r 79 -9.1 -3.66803 | opp_overlap 4051358, overlap 4051358 4051366 AACGAGCTAAAAAAT AAAAAGAGCTATATGAAAACATT TTC ATTGTTTTCATATAGCTCTTGAG TTTACAATATTAAAA TERM 4399 4051358 - 4051396 + r 100 -17.8 -3.28765 | opp_overlap 4051358, overlap 4051353 4051366 GCTAAAAAATAAAAA GAGCTATATGAAAACATT TTC ATTGTTTTCATATAGCTC TTGAGTTTACAATAT TERM 4400 4051396 - 4051358 - R 100 -17.8 -5.75538 | opp_overlap 4051358 4051353 4051366 GCTAAAAAATAAAAA GAGCTATATGAAAACATT TTC ATTGTTTTCATATAGCTC TTGAGTTTACAATAT CD3458 4052516 - 4051422 - | hypothetical protein TERM 4401 4052892 - 4052857 - R 91 -4.9 -6.0427 | opp_overlap 4052857 ATCATATAAAAAAAA GAGAGATATAAATTA ATATAA CACTTTATACCTCTC TTTTAAATATATTAT tkt' 4053880 - 4052939 - | transketolase, pyridine binding subunit TERM 4402 4053019 - 4053045 + g 72 -8.1 -3.34468 | opp_overlap 4053017, overlap 4053017 4053015 ATTTTTTTAACAATT CATTTGGAGTA CCAGA TTCTCCAAATG TATCTTTAATTCCAA tkt 4054700 - 4053873 - | transketolase, thiamine disphosphate-binding subunit TERM 4403 4054494 - 4054482 - G 72 -7.7 -3.56161 | opp_overlap 4054482 4054480, overlap 4054474 CAATGTAGCATATAA TGCTG GTG CAGCA TGTCCTTTTGATAAT TERM 4404 4054867 - 4054841 - R 87 -6 -5.80951 | gap 1, opp_overlap 4054841 4054839 ATTTAAAAGAAAAAA GGGA-TTGTCT AATAAA AGACAAATCCC TCTTTAAAAAGTAAA CD3461 4055233 - 4054871 - | putative regulator of cell growth CD3462 4055510 - 4055223 - | CopG-family transcriptional regulator alr 4056700 - 4055543 - | alanine racemase CD3464 4057305 - 4056715 - | putative lipoprotein CD3465 4057787 - 4057326 - | hypothetical protein TERM 4405 4057581 - 4057604 + g 90 -4.8 -5.75538 | gap 1 TCCTTGTAATAGATT TATATAGAGAG GTG CT-TCTATATA TTTTTCTTTTTTAAG acpS 4058182 - 4057802 - | 4'-phosphopantetheinyl transferase TERM 4406 4058620 - 4058585 - R 100 -9.2 -5.63645 | opp_overlap 4058586 4058587 4058589 4058610 CCAAAACACAAAAAA GCCATTTTACCCAAAA GTTT TTTTGGTCAAAATGAC TTTTTATACTCTAAA TERM 4407 4058610 - 4058620 + r 75 -5.4 -4.95155 | opp_overlap 4058585, overlap 4058589 4058587 4058586 CCAAAAGTTTTTTTG GTCA AAA TGAC TTTTTATACTCTAAA TERM 4408 4058664 - 4058678 + r 85 -8.6 -4.7033 | TCCACTCAGCAGATT CTGTCA ATA TGACAG TTTTATCTTGAGTTA atpC 4058904 - 4058644 - | ATP synthase epsilon chain (partial) atpD 4060301 - 4058907 - | F0F1 ATP synthase subunit beta TERM 4409 4059498 - 4059480 - G 70 -8.2 -3.09834 | overlap 4059493 CATTTCAGTAGCTAA TGTTGGCT GAT AACCAACA GCTGATGGCATACGT atpG 4061192 - 4060314 - | ATP synthase subunit gamma TERM 4410 4061203 - 4061219 + r 75 -8.1 -3.50853 | opp_overlap 4061201 GCCAATTAATTTACC TCCTTTT TTA AAAAGGA TTATACTTCAACAAC atpA 4062722 - 4061220 - | ATP synthase alpha chain atpH 4063284 - 4062739 - | ATP synthase subunit delta TERM 4411 4062960 - 4062970 + g 78 -4 -5.39905 | TTATTGCTACTCCAT CAAT TAC ATTG TTTTTCTTATTTAAT TERM 4412 4063047 - 4063057 + g 78 -4 -5.47159 | opp_overlap 4063047, overlap 4063051 CTTTATCTACTAAAA CTTT TAA AAAG TTTTTTATGTTAGAA atpF 4063796 - 4063281 - | ATP synthase B chain TERM 4413 4063853 - 4063806 - R 95 -10.9 -3.64915 | opp_overlap 4063809 4063833 4063851, overlap 4063800 4063809 4063850 4063851 TTCCATAAATCATAA CTACTTATAATCACGAGATGA TAAAGT TCATCTCATGATTATAAGTTT GAGATGATTTACCTA TERM 4414 4063809 - 4063850 + r 100 -14.8 -3.65353 | opp_overlap 4063806 4063800 4063809, overlap 4063833 CATAAATCATAACTA CTTATAATCACGAGATGA TAAAGT TCATCTCATGATTATAAG TTTGAGATGATTTAC TERM 4415 4063850 - 4063809 - R 100 -17 -2.93215 | opp_overlap 4063809 4063833, overlap 4063806 4063800 CATAAATCATAACTA CTTATAATCACGAGATGA TAAAGT TCATCTCATGATTATAAG TTTGAGATGATTTAC atpE 4064161 - 4063901 - | F0F1 ATP synthase subunit C TERM 4416 4064184 - 4064198 + r 76 -4.4 -5.40873 | opp_overlap 4064182, overlap 4064182 TCCTCCTTAAAACTT TAATTT TTT AAATTA TTTTATTTTTATCTT atpB 4064934 - 4064230 - | ATP synthase A chain atpI 4065323 - 4064937 - | ATP synthase protein I TERM 4417 4065244 - 4065228 - G 70 -8.1 -3.05596 | TACTGGTTTACTTAA TGTTGAT GTT ATCAACA TTAGCACAATTAAAA atpZ 4065555 - 4065328 - | putative ATP synthase protein CD3477 4066177 - 4065740 - | putative cytidine and deoxycytidylate deaminase CD3478 4067218 - 4066403 - | hypothetical protein TERM 4418 4067491 - 4067449 - R 70 -2.9 -5.53079 | overlap 4067467 AAAATATATAAAAAA GAACCTTCTTACATAAAAT TATAT ACACTATATAAGAAAGTCC CTAATAAATATTTAT upp 4068148 - 4067519 - | uracil phosphoribosyltransferase rpiB2 4068636 - 4068184 - | ribose-5-phosphate isomerase 2 CD3481 4069102 - 4068653 - | low molecular weight protein-tyrosine-phosphatase CD3482 4070180 - 4069119 - | hypothetical protein TERM 4419 4070078 - 4070090 + g 76 -6.3 -4.6008 | AAATAACTGTTTTAC CTTCT CTA AGAAG TTTTGCTTGTATTTT CD3483 4070868 - 4070188 - | putative zinc transporter TERM 4420 4070547 - 4070525 - G 73 -5.6 -4.54047 | TCAGTTGACATAAAA GAAGAACCAA TGG CTAGTCCTTC TGGTAAATTATGTAG prfA 4072061 - 4070997 - | peptide chain release factor 1 hemK 4072953 - 4072105 - | protein methyltransferase CD3486 4073864 - 4072971 - | hypothetical protein TERM 4421 4073345 - 4073369 + g 70 -8.7 -2.63901 | opp_overlap 4073349, overlap 4073344 4073351 TATGTTCTGCTCCAT GATATTGAAAG ACT CTTTCTATATC CTTACTTCGTGAAAT TERM 4422 4073995 - 4073974 - R 93 -10.2 -3.93367 | opp_overlap 4073973 4073972 4073961 4073974, overlap 4073972 TTTTGTAATAAAATA GGAGTTGG CTTCCT CCAACTCC ACTTTTATAAAAATT TERM 4423 4073974 - 4073995 + r 78 -10.2 -2.5369 | opp_overlap 4073974 4073972, overlap 4073973 4073972 4073961 TTTTGTAATAAAATA GGAGTTGG CTTCCT CCAACTCC ACTTTTATAAAAATT rpmE 4074209 - 4074009 - | 50S ribosomal protein L31 TERM 4424 4074253 - 4074241 - R 73 -3.5 -5.47218 | opp_overlap 4074241 CTTTATTTAAAAAAA TTAAT TAT ATTAA CTTTCTTTTTACATT rho 4075966 - 4074362 - | transcription termination factor Rho gtaB 4077431 - 4076466 - | UTP--glucose-1-phosphate uridylyltransferase TERM 4425 4076538 - 4076550 + g 72 -4.9 -4.87786 | overlap 4076526 ATCTGTATTATTGTA TAACA CAT TGTTA TTTTTATCAAATTCA TERM 4426 4077481 - 4077464 - R 100 -8.5 -5.48514 | opp_overlap 4077464 ATTAATAAATAAAAA GTCCTAT CTTG ATAGGAC TTTAAACTTTTAGTA TERM 4427 4077464 - 4077481 + r 76 -8.5 -3.77484 | opp_overlap 4077464 ATTAATAAATAAAAA GTCCTAT CTTG ATAGGAC TTTAAACTTTTAGTA CD3489 4079317 - 4077545 - | putative oligopeptidase TERM 4428 4079480 - 4079443 - R 100 -10.7 -4.87665 | opp_overlap 4079443 TTCTATTCATAAAAA GCCATCCTTTCAATAAG TTTA CTTAATAATAGGATGGC TTTTTTTAGATATAT TERM 4429 4079443 - 4079480 + r 100 -8.5 -5.51402 | opp_overlap 4079443 TTCTATTCATAAAAA GCCATCCTTTCAATAAG TTTA CTTAATAATAGGATGGC TTTTTTTAGATATAT TERM 4430 4079672 - 4079688 + r 80 -8.1 -4.31833 | overlap 4079664 TTTCTGCCATACTTA TCAACAA ATT TTGTTGA TTTATATGTTATTTT spoIIE 4082160 - 4079788 - | stage II sporulation protein e CD3491 4083170 - 4082250 - | putative exopolyphosphatase TERM 4431 4082445 - 4082458 + g 70 -3.9 -5.16969 | CTTTATTAATTTTTG TAGAA TTTC TTCTA TTTCTTTTTTGTGTA TERM 4432 4083221 - 4083202 - R 73 -2.1 -5.74684 | overlap 4083196 CAATAAAAACAAAAA GCCATCC TTAACT GAATGAC TTTTTTATTAAATCT CD3492 4083567 - 4083283 - | putative septum formation protein CD3493 4084106 - 4083573 - | hypothetical protein CD3494 4084361 - 4084107 - | hypothetical protein CD3495 4084674 - 4084423 - | putative RNA-binding protein hupA 4085015 - 4084737 - | DNA-binding protein HU TERM 4433 4084947 - 4084935 - G 76 -7.7 -4.0174 | opp_overlap 4084934 4084945 AACAGAACTCATAAA TGCGT TTA ACGCA GCTTCTGCTTCCTTC CD3497 4086552 - 4085104 - | bifunctional protein TERM 4434 4085437 - 4085464 + g 71 -7.2 -3.7948 | gap 1, overlap 4085436 TGCTTTATGTTGAAC TTTACTAGC-CTT CAT AAGAGCTGGTAAA TGTTTTGGTATCCTT spoIIIF 4088272 - 4086659 - | stage V sporulation protein B TERM 4435 4087788 - 4087778 - G 76 -5.4 -5.11033 | TACAACTCTAAAAAA TTGC TCT GCAA CTTGAGACACAGCAA TERM 4436 4088221 - 4088261 + g 100 -12.1 -3.99374 | opp_overlap 4088227 4088230 4088231, overlap 4088218 4088227 TTACACCTGCTAGCC CAAGTATAAGGGCTCCTTT TAG AAAGGAGTCTTTATTTTTG TTATTGTTCATAACA TERM 4437 4088227 - 4088255 + g 100 -11.9 -5.3798 | opp_overlap 4088227 4088230 4088231, overlap 4088218 4088221 CTGCTAGCCCAAGTA TAAGGGCTCCTTT TAG AAAGGAGTCTTTA TTTTTGTTATTGTTC spoVT 4088931 - 4088392 - | stage V sporulation protein T TERM 4438 4089001 - 4089023 + r 100 -9.3 -5.04987 | opp_overlap 4089001, overlap 4088989 AAATATACAAAAAAA GCTATATCT TATCC AGATATAGC TTTTTTAAGCATATT TERM 4439 4089023 - 4089001 - R 100 -9.3 -5.82281 | opp_overlap 4088989 4089001 AAATATACAAAAAAA GCTATATCT TATCC AGATATAGC TTTTTTAAGCATATT prsA 4090050 - 4089055 - | putative foldase lipoprotein (late stage protein export lipoprotein) mfd 4093467 - 4090081 - | transcription-repair coupling factor TERM 4440 4092893 - 4092852 - G 76 -9.1 -3.1096 | gap 1, opp_overlap 4092852 4092888 4092890, overlap 4092851 AATATACGTCAAAAG TTCGTATGGAATCTATCTCA TCA TCAAATA-ATTCCATACGAA TTGGATTTGTATATT pth 4094044 - 4093484 - | peptidyl-tRNA hydrolase CD3503 4094720 - 4094058 - | putative type IV prepilin leader peptidase TERM 4441 4094317 - 4094286 - G 80 -9.6 -3.3568 | opp_overlap 4094286, overlap 4094289 CAATGCAAAGCAACA TAAGCTATAGAGAC CTAC ATCTCCATAGCCTA ATCCTTTTGTTAGTT TERM 4442 4094314 - 4094289 - G 84 -9.1 -3.80094 | opp_overlap 4094286, overlap 4094286 TGCAAAGCAACATAA GCTATAGAGAC CTAC ATCTCCATAGC CTAATCCTTTTGTTA CD3504 4095592 - 4094810 - | putative type IV prepilin leader peptidase CD3505 4096655 - 4095573 - | putative type IV pilus retraction protein (putative twitching mobility protein) TERM 4443 4096429 - 4096460 + g 71 -6.6 -4.01137 | opp_overlap 4096438, overlap 4096431 AATCTTTCTCCTGTT TTTAGAGAAGCTGA AAAA TCAGCTTCTCCATG TTCTTCTATTACTTT TERM 4444 4096431 - 4096458 + g 93 -11.4 -3.57523 | opp_overlap 4096438, overlap 4096429 TCTTTCTCCTGTTTT TAGAGAAGCTGA AAAA TCAGCTTCTCCA TGTTCTTCTATTACT CD3506 4098289 - 4096751 - | hypothetical protein CD3507 4098837 - 4098310 - | putative type IV pilin CD3508 4099443 - 4098874 - | putative type IV pilin TERM 4445 4099117 - 4099135 + g 88 -3.2 -6.0458 | GTTTTGGATTCTCGT TACAGA ATATACC TCTGTA TTTTTTTTAGTTTCT CD3509 4100375 - 4099467 - | putative type IV pilus assembly protein TERM 4446 4100129 - 4100144 + g 80 -6.2 -4.98616 | CTTTTAGTTCACTTT CAACTT CTTC AAGTTG TTTTTCATATTTTGG CD3510 4102080 - 4100368 - | putaive membrane protein TERM 4447 4100826 - 4100836 + g 72 -4 -5.07275 | TTGTTAGTTCAACTT TACT TGG AGTA TTTTTATCTATATCA CD3511 4103303 - 4102095 - | type IV pilus assembly protein TERM 4448 4102769 - 4102757 - G 77 -4.9 -5.19879 | TTGTAAATATAAAAA TCATT ATA AATGA AGAAATCAAAACTAT TERM 4449 4102960 - 4102970 + g 74 -5.4 -4.99043 | opp_overlap 4102960 ATTGAATCTGCAATA GTAG AAC CTAC TTTTATTTCTGCCAC CD3512 4105000 - 4103315 - | type IV pilus assembly protein TERM 4450 4103958 - 4103972 + g 73 -5.8 -4.53648 | TACTCTATAGGGTCT TCTATT GTT AATAGA TTTCTATTTTCTGTA TERM 4451 4105101 - 4105047 - R 100 -14.8 -3.94853 | opp_overlap 4105052 4105055 4105065, overlap 4105052 4105065 TAATTGAACATTAAA GAAAATAGTATAAAAAAACAGGAAGA TTT TCTTCCTGTTTTTTTATTATATTTTT CATTATAACAATTTA TERM 4452 4105096 - 4105052 - R 100 -14.7 -4.99568 | opp_overlap 4105052 4105055 4105065, overlap 4105047 4105065 GAACATTAAAGAAAA TAGTATAAAAAAACAGGAAGA TTT TCTTCCTGTTTTTTTATTATA TTTTTCATTATAACA TERM 4453 4105052 - 4105096 + r 100 -14.7 -4.93365 | opp_overlap 4105052 4105047 4105065, overlap 4105055 4105065 GAACATTAAAGAAAA TAGTATAAAAAAACAGGAAGA TTT TCTTCCTGTTTTTTTATTATA TTTTTCATTATAACA TERM 4454 4105055 - 4105094 + r 100 -14.8 -4.08682 | gap 1, opp_overlap 4105052 4105047 4105065, overlap 4105052 4105065 CATTAAAGAAAATAG T-ATAAAAAAACAGGAAGA TTT TCTTCCTGTTTTTTTATTA TATTTTTCATTATAA TERM 4455 4105065 - 4105083 + r 100 -11.8 -5.94214 | opp_overlap 4105052 4105047 4105065, overlap 4105055 4105052 AATAGTATAAAAAAA CAGGAAGA TTT TCTTCCTG TTTTTTTATTATATT TERM 4456 4105083 - 4105065 - R 100 -11.8 -5.70829 | opp_overlap 4105065 4105055 4105052, overlap 4105052 4105047 AATAGTATAAAAAAA CAGGAAGA TTT TCTTCCTG TTTTTTTATTATATT CD3513 4105635 - 4105120 - | pilin TERM 4457 4106082 - 4106039 - R 100 -5.6 -6.30182 | gap 1, opp_overlap 4106045 4106075, overlap 4106043 4106045 4106075 CTATACAAAAAAAAA GAAACATCTCCCTACAAT-TA TTA TATATCGTAAGGAGATATTTA TAAATTATCATTTAG TERM 4458 4106078 - 4106043 - R 88 -6.4 -5.48106 | gap 1, opp_overlap 4106045 4106075, overlap 4106039 4106045 4106075 ACAAAAAAAAAGAAA CATCTCCCTACAAT-TA TTA TATATCGTAAGGAGATA TTTATAAATTATCAT TERM 4459 4106076 - 4106045 - R 73 -6.8 -4.29546 | gap 1, opp_overlap 4106045 4106075, overlap 4106043 4106039 4106075 AAAAAAAAAGAAACA TCTCCCTACAAT-TA TTA TATATCGTAAGGAGA TATTTATAAATTATC TERM 4460 4106706 - 4106670 - R 100 -12.5 -5.50313 | opp_overlap 4106672 TATAAAATCAAAAAA GAGTTGCTCAAAAGGTT TAT ATCCTTTTAAACAACTC TCATAAATACAATAA prs 4107673 - 4106723 - | ribose-phosphate pyrophosphokinase gcaD 4109147 - 4107768 - | bifunctional protein TERM 4461 4108566 - 4108578 + g 70 -6.3 -4.16033 | opp_overlap 4108564 4108566 ATCAGTCAAATAATA TTCAC CTT GTGAA TTGTTATTATTTAGC TERM 4462 4108700 - 4108719 + g 78 -9.4 -3.36862 | overlap 4108703 TTTGTTCCACTATTT TAAGAAGG TCAC CCTTCTTA TCTCTTATTATTCTA TERM 4463 4108852 - 4108838 - G 80 -10 -3.28712 | opp_overlap 4108824 TCTCTTCTTTTATAA GTGGAG TAT CTCCAC AAAGTACAACTATTG spoVG 4109638 - 4109360 - | stage V sporulation protein G TERM 4464 4109771 - 4109784 + r 80 -2.5 -6.13503 | CTTTTTATTTTTACA TATTT TTCT AAATA TTTTTTTTATTAATC purR 4110672 - 4109794 - | purine operon repressor TERM 4465 4110800 - 4110781 - H 76 -4.4 -5.2853 | opp_overlap 4110781 4110776, overlap 4110776 4110783 TATTCAAAAATAAAA TACATATA ATAT TATATGCA TATTAATTATAAAAT TERM 4466 4111063 - 4111053 - g 75 -4 -5.24531 | ATTGGTCAGAAAAAA GATA ATA TATC AGATGATGTAAATAT TERM 4467 4111735 - 4111749 + G 76 -10 -2.78206 | overlap 4111734 TATACAATGCTTCTT CTGCCA TAA TGGCAG CTCTTGTTTCTGGTA TERM 4468 4111803 - 4111790 - g 76 -2.5 -5.58179 | GACTATAAGAAAAAA TATAA AAAT TTATA AAGGTGTCGGAAGAA murC 4110891 - 4112243 + | UDP-N-acetylmuramate--L-alanine ligase TERM 4469 4112286 - 4112260 - T 89 -12.5 -2.78655 | opp_overlap 4112260, overlap 4112257 4112253 ATATAAAATAATTTA GGCTATCAAAT ATCTA ATTTGATAGCC TTCTTAAAGTCTTAT TERM 4470 4112260 - 4112286 + T 95 -12.5 -3.68704 | opp_overlap 4112260 4112257 4112253 ATATAAAATAATTTA GGCTATCAAAT ATCTA ATTTGATAGCC TTCTTAAAGTCTTAT CD3519 4113095 - 4112298 - | hypothetical protein CD3520 4114118 - 4113165 - | putative cation efflux protein TERM 4471 4114197 - 4114218 + r 75 -8.7 -3.13191 | opp_overlap 4114197, overlap 4114195 4114193 CTATAAAATGAAAAA TCACCTAGC TTAA GCTAGGCGA TATATATATTATACA TERM 4472 4114218 - 4114197 - R 100 -10.9 -5.1417 | opp_overlap 4114197 4114195 4114193 CTATAAAATGAAAAA TCACCTAGC TTAA GCTAGGCGA TATATATATTATACA CD3521 4115362 - 4114247 - | putative peptidase CD3522 4116784 - 4115513 - | hypothetical protein TERM 4473 4116651 - 4116661 + g 72 -5.4 -4.84363 | opp_overlap 4116651 TTTTCTACATATAAT GCAA TAA TTGC TTTTTCATCATTTAC TERM 4474 4116864 - 4116843 - R 100 -8.1 -5.81622 | opp_overlap 4116838 4116843 ACAAAATTAAAAAAA GTACCTTCT ATTT AGAAGATAC TTTTGTATTTATTAT TERM 4475 4116843 - 4116864 + r 76 -5.9 -4.91194 | opp_overlap 4116843, overlap 4116838 ACAAAATTAAAAAAA GTACCTTCT ATTT AGAAGATAC TTTTGTATTTATTAT ksgA 4117719 - 4116850 - | dimethyladenosine transferase TERM 4476 4117068 - 4117080 + g 77 -4.9 -5.24647 | AAAATATGTCTTCAT TATGA ACA TCATA TTTTCTTTTATCTCT CD3524 4118420 - 4117890 - | putative DNA-binding protein TERM 4477 4118553 - 4118584 + r 91 -8.2 -4.92783 | gap 1, opp_overlap 4118553 4118555, overlap 4118555 ATAAATATATCAAAA GAGCCTAGA-TATAA AAC TTATATTCTAGGCGC TTTTTGTACTAAATT TERM 4478 4118584 - 4118553 - R 82 -8.2 -4.47397 | gap 1, opp_overlap 4118553 4118555, overlap 4118555 ATAAATATATCAAAA GAGCCTAGA-TATAA AAC TTATATTCTAGGCGC TTTTTGTACTAAATT TERM 4479 4118555 - 4118582 + r 75 -9.4 -2.72028 | gap 1, opp_overlap 4118553 4118555, overlap 4118553 AAATATATCAAAAGA GCCTAGA-TATAA AAC TTATATTCTAGGC GCTTTTTGTACTAAA TERM 4480 4118582 - 4118555 - R 84 -9.4 -3.82503 | gap 1, opp_overlap 4118555 4118553, overlap 4118553 AAATATATCAAAAGA GCCTAGA-TATAA AAC TTATATTCTAGGC GCTTTTTGTACTAAA CD3525 4119679 - 4118612 - | putative iron ABC transporter, solute-binding protein CD3526 4121379 - 4119691 - | putative iron ABC transporter, permease protein CD3527 4122392 - 4121397 - | putative iron ABC transporter, ATP-binding protein TERM 4481 4122680 - 4122706 + r 82 -9.6 -3.34109 | opp_overlap 4122681, overlap 4122681 4122683 CTCTAAAAATAAAAA ATATACCATTCA AAC TGAATGGTATAC TTACTCTATACATTT TERM 4482 4122705 - 4122681 - R 100 -13.1 -5.93252 | opp_overlap 4122680 4122681 4122683 TCTAAAAATAAAAAA TATACCATTCA AAC TGAATGGTATA CTTACTCTATACATT TERM 4483 4122681 - 4122705 + r 91 -13.1 -2.59743 | opp_overlap 4122681, overlap 4122680 4122683 TCTAAAAATAAAAAA TATACCATTCA AAC TGAATGGTATA CTTACTCTATACATT TERM 4484 4122683 - 4122703 + r 85 -11.3 -2.83345 | opp_overlap 4122681, overlap 4122681 4122680 TAAAAATAAAAAATA TACCATTCA AAC TGAATGGTA TACTTACTCTATACA CD3528 4123896 - 4122829 - | putative iron ABC transporter, solute-binding lipoprotein CD3529 4125596 - 4123908 - | putative iron ABC transporter, permease protein TERM 4485 4124396 - 4124380 - G 71 -2.3 -5.47218 | overlap 4124382 4124384 GCTGAGTTAAAAAAA GTTATAT ATG ATATACC TAAAACTAAGCCAGG CD3530 4126609 - 4125614 - | putative iron ABC transporter, ATP-binding protein TERM 4486 4125652 - 4125668 + g 73 -5.9 -4.65263 | ATTGTACAATTCCTT CTTTAGG TAT CTTAAAG TTTATTTTAGAACCT CD3531 4127446 - 4126610 - | putative phophoesterase TERM 4487 4126664 - 4126640 - G 71 -7.4 -3.79481 | opp_overlap 4126640 4126639 TAAAGCTAACCTAAA CTTAAATAAA TCTTC TTTATTTAAG CTCTTGCTTCCAAGT phnM 4128619 - 4127450 - | putative amidohydrolase phnL 4129333 - 4128620 - | phosphonate ABC transporter, ATP-binding protein phnK 4130240 - 4129374 - | phosphonate ABC transporter, ATP-binding protein phnJ 4131102 - 4130233 - | putative phosphonate metabolism protein phnI 4132207 - 4131122 - | putative phosphonate metabolism protein phnH 4132785 - 4132210 - | putative phosphonate metabolism protein TERM 4488 4132573 - 4132588 + g 76 -2.6 -5.53079 | overlap 4132575 TATTTGATTTGACAT TGTAAG CGCT CTTATA TTTTTTATATCTTTT phnG 4133231 - 4132800 - | putative phosphonate metabolism protein TERM 4489 4133513 - 4133475 - R 80 -6.9 -4.9792 | gap 1, opp_overlap 4133504, overlap 4133497 GATTTCATACAAAAA GAGTGCCTCATAAACTAA AAAA CTCATTT-TGAGGCACTC TCATCCTATACTTAT TERM 4490 4133507 - 4133497 - R 81 -5.4 -5.42514 | opp_overlap 4133504, overlap 4133475 TCATAAACTAAAAAA CTCA TTT TGAG GCACTCTCATCCTAT CD3539 4134338 - 4133568 - | putative deoxyribonuclease metG 4136305 - 4134368 - | methionyl-tRNA synthetase TERM 4491 4135184 - 4135196 + g 70 -6.3 -4.14576 | TGAAACTTTTGCTGT TGGTA TTA TACCA TTATTGTATTTTTCA TERM 4492 4136399 - 4136371 - R 100 -9.7 -5.72254 | gap 1, opp_overlap 4136370 4136369 TTAAATAATAAAAAA TCGCCTCCTATG AGTTAA CATAGG-GGCGA GATTATTCACGGTAC TERM 4493 4136440 - 4136463 + r 72 -6.2 -4.43501 | gap 1 CATCTATAATAGTTA TGTTTC-ACAT GAA ATGTAGAAACA TTTTATAGATACCTT spmB 4137222 - 4136701 - | spore maturation protein B spmA 4137822 - 4137238 - | spore maturation protein A TERM 4494 4138130 - 4138150 + G 72 -7.7 -3.63895 | opp_overlap 4138130 TGAATACATAGATAA TCTTCATTT TTC AGATGAAGA TTTAGAGTACTTAAA CD3543 4137954 - 4139384 + | putative nicotinate phosphribosyltransferase CD3544 4139421 - 4139849 + | transcription regulator AsnC CD3545 4140741 - 4140037 - | hypothetical protein CD3546 4141597 - 4140764 - | putative corrin/porphyrin methyltransferase CD3547 4142344 - 4141598 - | hypothetical protein TERM 4495 4142415 - 4142398 - R 90 -7.7 -5.01732 | opp_overlap 4142398 AATTGCTTTAAAAAA GGTAGGA AAAG CCCTACC TTAAATTTAATCTTC CD3548 4143315 - 4142422 - | putative signal peptidase II CD3549 4144247 - 4143312 - | putative DNA polymerase III, delta' subunit TERM 4496 4143688 - 4143675 - G 74 -6.7 -4.21194 | opp_overlap 4143674 TCTCATCATTGAAAA CTCAG AAGA CTGAG ATAGATTTAGAGCAT CD3550 4144939 - 4144250 - | putative thymidylate kinase speA 4146479 - 4145070 - | putative arginine decarboxylase TERM 4497 4146619 - 4146580 - R 100 -19.8 -4.39828 | opp_overlap 4146585 AATATTTTTATAAAA TTAAATACCTCATTCTAA ACAT TTAGAATGAGGTATTTAA CATAAAAGCATAAAT TERM 4498 4146585 - 4146614 + r 100 -15.3 -3.59979 | opp_overlap 4146580 TTTTATAAAATTAAA TACCTCATTCTAA ACAT TTAGAATGAGGTA TTTAACATAAAAGCA CD3551A 4146825 - 4146634 - | hypothetical protein TERM 4499 4147073 - 4147090 + r 73 -5.7 -4.78764 | CACATAATCTTTATG CTTAATA TTTA TATTAAG TTTTTAATAAGTTTA TERM 4500 4147112 - 4147124 + r 72 -6.3 -4.46233 | opp_overlap 4147111 4147102 4147112, overlap 4147108 ATAAGTTTATAGAAT CTAGT AAT ACTAG TTTCTTTAGAGTTAG TERM 4501 4149556 - 4149567 + r 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 4502 4149629 - 4149644 + r 81 -10.4 -2.71011 | overlap 4149643 GTAGTATTTAGCCTT GGAGGG TGGT CCCTCC TGCTTCCCACAGGGT TERM 4503 4149793 - 4149814 + r 91 -10.3 -3.62096 | GATATGTCCGCAACC CCAATAAAG AAAA CTTTATTGG TTTGGGCTAATCCGC TERM 4504 4150379 - 4150335 - R 75 -8.2 -3.53091 | gap 1, opp_overlap 4150329, overlap 4150336 ATCCCGTTGCTTAAA GTGCTAATTTTGAGTATTCGT AAAA ACGAACCCTCAAAATTAA-AC AGTAGGTAATTCTCC TERM 4505 4151106 - 4151094 - R 85 -10.5 -3.05463 | AGCTGCGGCACCGAA GGGGG TAA CCCCC GACACCTAGTACTCA TERM 4506 4151749 - 4151764 + r 70 -7.6 -3.41125 | ATTATCCCGTATTAG CATACC TTTC GGTATG TTATCCGTGTGTACA CD3551B 4152468 - 4152187 - | hypothetical protein TERM 4507 4152612 - 4152667 + r 82 -11 -2.50113 | opp_overlap 4152619 4152624 4152651, overlap 4152611 4152619 CATTCTACACTGACA TTTTAAATAAAATTTAGCTATTTATT GATA ATTTAATAGCTAAACTTTATTTAAAA CTTAGTAGAATGCTA lysS 4154219 - 4152690 - | lysyl-tRNA synthetase greA 4154713 - 4154234 - | transcription elongation factor dusB 4155790 - 4154822 - | tRNA-dihydrouridine synthase TERM 4508 4155916 - 4155890 - R 100 -11.7 -4.92783 | opp_overlap 4155888 4155884 4155890 AATCTATCATAAAAA GGGAATTGGAT ATATA ACCCAATTCCC TGTATATTAATTATT TERM 4509 4155890 - 4155916 + r 80 -9.5 -3.1682 | opp_overlap 4155890, overlap 4155888 4155884 AATCTATCATAAAAA GGGAATTGGAT ATATA ACCCAATTCCC TGTATATTAATTATT CD3555 4156697 - 4155927 - | pantothenate kinase CD3556 4157306 - 4156716 - | hypothetical protein CD3557 4158458 - 4157490 - | putative peptidase birA 4159428 - 4158451 - | BirA bifunctional protein [includes: biotin operon repressor and biotin--[acetyl-CoA-carboxylase] synthetase TERM 4510 4159647 - 4159661 + r 71 -7.2 -3.92143 | opp_overlap 4159621 4159644 4159633 4159647, overlap 4159626 ATTAAATTAATACAT GCAAAT ATA ATTTGC TTATTAATTTAATAT ftsH2 4161737 - 4159743 - | cell division protein TERM 4511 4160500 - 4160519 + g 86 -9.4 -3.94724 | TTTTTAGCCACACCT GCTATAAC CTTT GTTATAGC TTCTTCTATAGTTTC TERM 4512 4161609 - 4161619 + g 72 -2.6 -5.37043 | TACTTCAGAGAATTT TAAA TCT TTTA TTTTTTCTGTAGGCT CD3560 4163135 - 4161747 - | putative ATPase TERM 4513 4163285 - 4163268 - R 75 -5.6 -5.06223 | opp_overlap 4163268 ATAAATTAAATAAAA GGTAGT TTTTTC ACTACC TTTATAAAATTTCTG CD3561 4163746 - 4163318 - | hypothetical protein TERM 4514 4163669 - 4163681 + g 72 -6.3 -4.35327 | AAAGGCAGTCATCTC TATGG TGT CCATA TTTCCTTTTTCATCA murI 4164569 - 4163763 - | glutamate racemase TERM 4515 4163826 - 4163850 + g 74 -9.5 -2.81642 | overlap 4163828 4163830 TAAGAACTCTCTTGC TATATCTGAAA ATT TTTCAGGTATA TCTGATACATAATAT CD3563 4165277 - 4164771 - | putative spore cortex-lytic enzyme spoIIR 4165966 - 4165307 - | stage II sporulation protein TERM 4516 4166092 - 4166057 - R 100 -14.4 -5.83226 | opp_overlap 4166057 AATCTAATAAAAAAA GCTATCTTAAAATGAT TACA ATCATTTTAAAATAGC TTTTTAAACCTTATA TERM 4517 4166057 - 4166092 + r 100 -12.2 -4.63542 | opp_overlap 4166057 AATCTAATAAAAAAA GCTATCTTAAAATGAT TACA ATCATTTTAAAATAGC TTTTTAAACCTTATA CD3565 4166766 - 4166110 - | GntR family transcriptional regulator TERM 4518 4166319 - 4166331 + g 81 -3.5 -5.66229 | CCCACAATGAGTTTA TTAAT TGG ATTAA TTTTTTATTATTAGT ipk 4167664 - 4166774 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 4519 4167754 - 4167729 - R 100 -12.1 -5.49579 | opp_overlap 4167723 4167729 4167732 CTACAAAAAATAAAA TAATAGGGTAT TATA ATACCCTATTA TACTTAATTACTTTA TERM 4520 4167729 - 4167754 + r 89 -12.1 -2.88425 | opp_overlap 4167729, overlap 4167723 4167732 CTACAAAAAATAAAA TAATAGGGTAT TATA ATACCCTATTA TACTTAATTACTTTA TERM 4521 4167732 - 4167751 + r 83 -9.4 -3.57128 | opp_overlap 4167729, overlap 4167729 4167723 CAAAAAATAAAATAA TAGGGTAT TATA ATACCCTA TTATACTTAATTACT CD3567 4169332 - 4167782 - | putative cell wall hydrolase TERM 4522 4169398 - 4169423 + r 72 -6.3 -4.40311 | opp_overlap 4169398 GGAGCAAAAAAAAAA TTACACCTATT TTTA AATAGGTATAA TTTTAACTTATTTGT TERM 4523 4169423 - 4169398 - R 100 -8.5 -6.41805 | opp_overlap 4169398 GGAGCAAAAAAAAAA TTACACCTATT TTTA AATAGGTATAA TTTTAACTTATTTGT Veg 4169692 - 4169426 - | hypothetical protein CD3569 4170700 - 4169840 - | putative peptidase CD3570 4171722 - 4170784 - | dipeptidase TERM 4524 4171789 - 4171768 - R 85 -8.1 -4.56791 | opp_overlap 4171750 4171770, overlap 4171762 ATCTAAAAATAGAAA TAGTTGTCC TTAT AGACAACTA TTGACAACTATTTTT CD3570A 4171993 - 4171832 - | hypothetical protein TERM 4525 4171895 - 4171915 + g 72 -2.7 -5.47821 | ATGCCATGTTTTATC TATATTATT TTC ACTAATATA TTTTTTTAAATCAGT TERM 4526 4171954 - 4171926 - G 95 -12 -3.5525 | opp_overlap 4171922 4171926 ATATATTTTTTTAAA TCAGTTAAAGAT GTAAA ATCTTTAACTGA TAAATTGTCATCATC TERM 4527 4171926 - 4171954 + g 89 -12 -2.62024 | opp_overlap 4171926, overlap 4171922 ATATATTTTTTTAAA TCAGTTAAAGAT GTAAA ATCTTTAACTGA TAAATTGTCATCATC CD3571 4172500 - 4172003 - | hypothetical protein TERM 4528 4172568 - 4172578 + r 75 -5.4 -4.93365 | CTTTTAGTTAGATTG GAAG TTT CTTC TTTTTGATTATACCA CD3572 4173325 - 4172615 - | hypothetical protein CD3573 4174031 - 4173501 - | hypothetical protein CD3574 4174278 - 4174048 - | hypothetical protein CD3575 4175687 - 4174293 - | putative sodium:solute symporter TERM 4529 4175778 - 4175743 - R 93 -11.4 -3.47431 | opp_overlap 4175746 4175776, overlap 4175746 ATATCTAAATATGAA CAACTCTACCCATTTC CATA AAAATAGGTAGAGTTA TATAATAATTATAAG TERM 4530 4175775 - 4175746 - R 100 -10.9 -3.8613 | opp_overlap 4175746, overlap 4175743 TCTAAATATGAACAA CTCTACCCATTTC CATA AAAATAGGTAGAG TTATATAATAATTAT TERM 4531 4175746 - 4175775 + r 72 -8 -3.58133 | opp_overlap 4175746 4175743 TCTAAATATGAACAA CTCTACCCATTT CCATAA AAATAGGTAGAG TTATATAATAATTAT CD3576 4177066 - 4175813 - | transporter mdeA 4178271 - 4177117 - | methionine gamma-lyase TERM 4532 4178157 - 4178171 + g 77 -8.6 -3.67517 | overlap 4178153 GCTCTACTGTCTTTG CAGCAA ATG TTGCTG TTTGACATATTGGTG TERM 4533 4178427 - 4178457 + r 73 -7 -4.09348 | opp_overlap 4178433 TTTTACAGTTCTAAT TATAAACTCTATAG TAA CTATAGAGTCAATA TGTTTTTGATATTTT TERM 4534 4178451 - 4178433 - R 95 -10.4 -4.05714 | opp_overlap 4178427 AGTTCTAATTATAAA CTCTATAG TAA CTATAGAG TCAATATGTTTTTGA TERM 4535 4178548 - 4178505 - R 100 -18.6 -4.9218 | opp_overlap 4178505 TAGTCAGTACAAAAA TAGGTATATCTTAGAATAAC TAAA GTCATCCTAAGATATACCTA TTTTTATATCACAAT TERM 4536 4178505 - 4178548 + r 100 -14.2 -4.9725 | opp_overlap 4178505 TAGTCAGTACAAAAA TAGGTATATCTTAGAATAAC TAAA GTCATCCTAAGATATACCTA TTTTTATATCACAAT TERM 4537 4178769 - 4178810 + r 75 -6.9 -4.49939 | gap 1, opp_overlap 4178769 4178771, overlap 4178771 4178773 ATCTAAAAATAATTA GA-TAGAGGTATAAATGTAT TTA GTTTATTTATACCTCTAGTC TTTTATAAATTATAT TERM 4538 4178771 - 4178807 + r 76 -9.7 -2.89859 | opp_overlap 4178769 4178771, overlap 4178769 4178773 CTAAAAATAATTAGA TAGAGGTATAAATGTAT TTA GTTTATTTATACCTCTA GTCTTTTATAAATTA CD3578 4179400 - 4178831 - | putative resolvase CD3579 4179603 - 4179830 + | hypothetical protein TERM 4539 4180043 - 4179986 - T 87 -10.9 -3.11768 | opp_overlap 4180032, overlap 4179994 TCACATTATTTAAGA TAGATAAATCTTAACCCTACTCCAGCA TAAA TACTAAAATAGGGCTTAGAATTATCTA TATTTTTATCCCATA TERM 4540 4180035 - 4179994 - T 73 -6.7 -4.21343 | opp_overlap 4180032, overlap 4179986 TTTAAGATAGATAAA TCTTAACCCTACTCCAGCA TAAA TACTAAAATAGGGCTTAGA ATTATCTATATTTTT CD3580 4180792 - 4180049 - | hypothetical protein TERM 4541 4180739 - 4180766 + g 74 -9.4 -2.74203 | opp_overlap 4180739 4180740, overlap 4180738 4180736 AAAATCTTCATTAAA TTGTACATATAA TATA TTATATGTACAG GTATTTGTAGATTGA TERM 4542 4180766 - 4180739 - G 71 -7.2 -3.75863 | opp_overlap 4180739 4180738 4180736, overlap 4180740 AAAATCTTCATTAAA TTGTACATATAA TATA TTATATGTACAG GTATTTGTAGATTGA TERM 4543 4180765 - 4180740 - G 82 -10.7 -2.84795 | opp_overlap 4180739 4180738 4180736, overlap 4180739 AAATCTTCATTAAAT TGTACATATAA TATA TTATATGTACA GGTATTTGTAGATTG CD3581 4180960 - 4181832 + | hypothetical protein CD3582 4181832 - 4182497 + | putative pseudouridylate synthase CD3583 4182518 - 4183375 + | MerR family transcriptional regulator TERM 4544 4183470 - 4183504 + T 81 -7.3 -4.90266 | gap 1, opp_overlap 4183470 GAGATTTTCAAAAAA TAGGAGGAAATATGGC TAAT GCTA-ATTCCCTCCTA TTTTTAATTAATCCA TERM 4545 4183504 - 4183470 - T 83 -7.3 -5.04385 | gap 1, opp_overlap 4183470 GAGATTTTCAAAAAA TAGGAGGAAATATGGC TAAT GCTA-ATTCCCTCCTA TTTTTAATTAATCCA CD3584 4186077 - 4183531 - | putative ABC transporter, permease protein CD3585 4186763 - 4186077 - | ABC transporter, ATP-binding protein TERM 4546 4186219 - 4186236 + g 71 -4.9 -4.84527 | overlap 4186210 CTCTCTTTCAGTAAC TGGATAA TCTC TTGTCCA TTTTTACTGTCTAAG CD3586 4187835 - 4186846 - | two-component sensor histidine kinase CD3587 4188508 - 4187822 - | two-component response regulator TERM 4547 4188827 - 4188861 + r 74 -8.7 -3.0873 | opp_overlap 4188827 4188832, overlap 4188831 4188832 ATCCATTTATTAAAA TAAAAGGCAATAGCT TCTAT AGCTAATGCCCTTTA TCTTAAAATGATTTA TERM 4548 4188861 - 4188827 - R 100 -10.9 -4.28548 | opp_overlap 4188827 4188831 4188832, overlap 4188832 ATCCATTTATTAAAA TAAAAGGCAATAGCT TCTAT AGCTAATGCCCTTTA TCTTAAAATGATTTA TERM 4549 4188856 - 4188832 - R 95 -8.6 -5.13722 | opp_overlap 4188831 4188827 4188832, overlap 4188827 TTTATTAAAATAAAA GGCAATAGCT TCTAT AGCTAATGCC CTTTATCTTAAAATG TERM 4550 4188832 - 4188856 + r 71 -8.6 -3.11738 | opp_overlap 4188832 4188827, overlap 4188831 4188827 TTTATTAAAATAAAA GGCAATAGCT TCTAT AGCTAATGCC CTTTATCTTAAAATG carB 4192214 - 4189008 - | carbamoyl phosphate synthase large subunit pyrAA1 4193456 - 4192407 - | carbamoyl phosphate synthase small subunit carB 4196920 - 4193714 - | carbamoyl phosphate synthase large subunit TERM 4551 4195797 - 4195807 + g 70 -4 -4.85894 | CCAGTTGCCATCATC TTAG TTC CTAA TTTTCTATTTGCTTT pyrAA2 4198016 - 4196973 - | carbamoyl phosphate synthase small subunit pyrF 4198758 - 4198042 - | orotidine 5'-phosphate decarboxylase TERM 4552 4198158 - 4198169 + g 75 -4.4 -5.21709 | TTATTGCATCTGATG GAGT TACA ACTC TTTTTTGGTCTCCAA TERM 4553 4198828 - 4198803 - R 79 -4 -5.73339 | ATAATCATAAAAAAA TCCTCACACC AAAAGA GGCATAAGGA TTTTATCTATACATA TERM 4554 4198962 - 4198941 - R 81 -7.3 -4.76041 | opp_overlap 4198941 TATACTCATCAAAAA CCTCTAGAA GATT TACTAGAGG TTATATACTAACATT CD3593 4199721 - 4199134 - | hypothetical protein CD3594 4200707 - 4199793 - | hypothetical protein TERM 4555 4200688 - 4200664 - G 73 -5.9 -4.62069 | TTCTTACTGGAAAAA TTTCTTACAGA TTT TCTATAAAAAA TGGCTTCATAAAGCT TERM 4556 4200757 - 4200771 + H 78 -4.4 -5.4588 | opp_overlap 4200757 AACTCTATAAATTTA TATAAA TAC TTTATA TTTTTTATAGTTTTA CD3595 4201307 - 4202536 + | aminopeptidase TERM 4557 4202557 - 4202590 + T 70 -4.7 -4.89233 | gap 2, opp_overlap 4202557 GATTTTAACTAAAAA GGGCTGATGGAAGTT ATACCA GACTTCC--CAGCCC TTTTTAATGTTGATG CD3596 4205122 - 4202741 - | putative homocysteine S-methyltransferase CD3597 4205819 - 4205094 - | hypothetical protein TERM 4558 4205645 - 4205682 + gr 100 -13.1 -4.93968 | opp_overlap 4205650 4205654, overlap 4205650 CTTTATTTATTTTAA TAGGATAAATCCTAGAT AAAT ATCTAGGATTTATTTTA TTTTTAGTTATAGCT TERM 4559 4205677 - 4205650 - GR 100 -13 -2.75074 | opp_overlap 4205650 4205645, overlap 4205654 TTTATTTTAATAGGA TAAATCCTAGAT AAAT ATCTAGGATTTA TTTTATTTTTAGTTA TERM 4560 4205650 - 4205677 + gr 100 -13 -5.34655 | opp_overlap 4205650 4205654, overlap 4205645 TTTATTTTAATAGGA TAAATCCTAGAT AAAT ATCTAGGATTTA TTTTATTTTTAGTTA TERM 4561 4205673 - 4205654 - GR 88 -9.4 -4.06384 | opp_overlap 4205650 4205645, overlap 4205650 TTTTAATAGGATAAA TCCTAGAT AAAT ATCTAGGA TTTATTTTATTTTTA luxS 4206264 - 4205809 - | S-ribosylhomocysteinase TERM 4562 4206317 - 4206345 + r 70 -7.5 -3.35054 | opp_overlap 4206317, overlap 4206315 4206313 TAATTCTAAAAAAAA CTCTTCCTATCTA TTA TTGATAAGAAGAG TATATTATTTCAAGT TERM 4563 4206345 - 4206317 - R 100 -9.7 -5.81032 | opp_overlap 4206317 4206315 4206313 TAATTCTAAAAAAAA CTCTTCCTATCTA TTA TTGATAAGAAGAG TATATTATTTCAAGT CD3599 4207739 - 4206546 - | two-component sensor histidine kinase CD3600 4208409 - 4207717 - | two-component response regulator CD3601 4209259 - 4208543 - | D-alanyl-D-alanine carboxypeptidase TERM 4564 4208956 - 4208973 + g 79 -5.5 -5.06961 | overlap 4208950 4208949 4208958 AATCTTCAACTGCCT TTGCAGG TTCT CCTGCCA TTTGTTTTTCTTCCT CD3602 4209384 - 4210118 + | putative ATPase CD3603 4211254 - 4210403 - | putative exported phosphoesterase CD3604 4212218 - 4211280 - | hypothetical protein CD3605 4212971 - 4212321 - | putative phosphatase TERM 4565 4213035 - 4213066 + r 90 -11.8 -3.06831 | opp_overlap 4213035 TATCTATTTTAAAAA GCTATAGTAATAGA AATT TCTAATACTATAGC TTAAGTACCAATTAA TERM 4566 4213066 - 4213035 - R 100 -11.8 -4.62783 | opp_overlap 4213035 TATCTATTTTAAAAA GCTATAGTAATAGA AATT TCTAATACTATAGC TTAAGTACCAATTAA CD3605A 4213308 - 4213120 - | ferredoxin CD3606 4214599 - 4213415 - | putative amidohydrolase TERM 4567 4214689 - 4214659 - R 70 -4.3 -5.05113 | gap 1, opp_overlap 4214659 CTTACATAAAGAAAA TAAGCCTAAAA-AT AAAA ATATTTTAGACTTA TTCACTATATTATAC CD3607 4215658 - 4214741 - | hypothetical protein CD3608 4216408 - 4215680 - | ABC transporter, ATP-binding protein TERM 4568 4216565 - 4216543 - R 100 -9.3 -5.46698 | TTGAAAAGTAAAAAA GATGAGTTT TATGT AAACTCATC TCAGAAATTTAGTAT CD3609 4216804 - 4216604 - | hypothetical protein CD3610 4217309 - 4216929 - | putative glyoxalase TERM 4569 4217090 - 4217105 + g 78 -6.2 -4.78981 | AAATTATTGATGGAT GAGATA CATT TATCTC TTTGTTTTGCTTCAT TERM 4570 4217570 - 4217537 - H 100 -9.1 -5.42131 | opp_overlap 4217537 TAACTACATAAAAAA TCACTTCTAAATAGA GTTA TCCATCTAAAAGTGA TTTCATATATTCTAT TERM 4571 4219097 - 4219044 - H 74 -8.6 -3.40403 | opp_overlap 4219035 4219044 TTGTTCGCATTATAA TATACTGCTTTCAAATAATATAAA TCTTGT TTAATATCATTTGAACACAGTATA TCTTTATAATTATCT CD3613 4219388 - 4219840 + | hypothetical protein CD3614 4220614 - 4219997 - | hypothetical protein CD3615 4221849 - 4221037 - | MerR family transcriptional regulator CD3616 4223343 - 4221925 - | potassium/proton antiporter TERM 4572 4222964 - 4222950 - G 77 -8.6 -3.55205 | opp_overlap 4222952, overlap 4222948 4222954 GCAACACAGCAAACA CAGATG CAG CATCTG TTGAAGCTGCAATTG TERM 4573 4222975 - 4222954 - G 74 -8.7 -3.2234 | opp_overlap 4222952, overlap 4222950 4222948 CACAGCAAACACAGA TGCAGCATC TGTT GAAGCTGCA ATTGCCCCAATTAAT TERM 4574 4223370 - 4223393 + r 70 -4.8 -4.84262 | gap 1 CATTTCATATAAATT TTGTAGAT-TA ATT TACATCTACAA TTTTATTACTTATTC TERM 4575 4223675 - 4223659 - R 82 -8.1 -4.52897 | opp_overlap 4223658 ATAAGTAACAAGAAA CTAACAT GTA ATGTTAG GTACTCTAGATATGA TERM 4576 4223819 - 4223787 - R 100 -8.7 -5.26119 | opp_overlap 4223790, overlap 4223790 TTCTTAAAAATAAAA TAATTGCATAATTTA TTT CAAATTATGCAATTT ATAAAATTTATTCCC TERM 4577 4223816 - 4223790 - R 100 -10.4 -4.70511 | opp_overlap 4223790, overlap 4223787 TTAAAAATAAAATAA TTGCATAATTTA TTT CAAATTATGCAA TTTATAAAATTTATT TERM 4578 4223790 - 4223816 + r 86 -9.7 -3.96893 | opp_overlap 4223790 4223787 TTAAAAATAAAATAA TTGCATAATTT ATTTC AAATTATGCAA TTTATAAAATTTATT CD3617 4224744 - 4223827 - | hypothetical protein CD3618 4225000 - 4225383 + | hypothetical protein TERM 4579 4225481 - 4225458 - T 70 -3.8 -5.15634 | opp_overlap 4225453 4225458 TAGTGTAGTAAAAAA GTCGTGTC CTAAGACT GTCACGAC TTTTATTTGTATAAA CD3619 4225988 - 4225539 - | putative acetyltransferase CD3620 4226523 - 4226155 - | hypothetical protein TERM 4580 4226608 - 4226588 - R 70 -7.7 -3.31269 | opp_overlap 4226588 4226592, overlap 4226592 CCTATATTATATTAA GAAATTCTT GTA AAGAATCTC TAATGTATAATATGA CD3621 4227538 - 4226672 - | hypothetical protein phnA 4228452 - 4228108 - | putative phosphonoacetate hydrolase CD3623 4229258 - 4228641 - | putative ABC transporter, ATP-binding protein CD3624 4231425 - 4229263 - | putative ABC transporter, permease protein TERM 4581 4231121 - 4231137 + g 71 -5.9 -4.42081 | TCATTTGAATTAGTA TTAGGAA ATT TTCCTGA TTTTAACTTTATATT TERM 4582 4231616 - 4231571 - R 100 -14.4 -5.24799 | opp_overlap 4231571 TCACAAAGATAAAAA TAGCCTTAAAGCAGTTAATT TTTTAT AATCAACTGTTTTAAGGCTA TTTTTTATTTTTAGC TERM 4583 4231571 - 4231616 + r 100 -14.4 -5.93252 | opp_overlap 4231571 TCACAAAGATAAAAA TAGCCTTAAAGCAGTTAATT TTTTAT AATCAACTGTTTTAAGGCTA TTTTTTATTTTTAGC CD3625 4234274 - 4231767 - | putative signaling protein TERM 4584 4233134 - 4233121 - G 82 -6.7 -4.95155 | overlap 4233123 CCTATACTATAAAAA GATGG TATT CCATC CCAACTGTCTTCCCC TERM 4585 4234700 - 4234756 + r 70 -3.4 -5.35365 | gap 2, opp_overlap 4234708, overlap 4234701 4234703 4234705 4234707 4234708 TTAAATTTGAATAAT ATTAAAA-AG-GCTGTATCATAGTAATT ATA AGATACTATGATACAGCCCTATGTTAAA TTTTTCTTATATTTT TERM 4586 4234703 - 4234751 + r 75 -8.3 -3.53262 | opp_overlap 4234708, overlap 4234701 4234700 4234705 4234707 4234708 AATTTGAATAATATT AAAAAGGCTGTATCATAGTAATT ATA AGATACTATGATACAGCCCTATG TTAAATTTTTCTTAT TERM 4587 4234705 - 4234749 + r 93 -10.9 -3.3167 | opp_overlap 4234708, overlap 4234703 4234701 4234700 4234707 4234708 TTTGAATAATATTAA AAAGGCTGTATCATAGTAATT ATA AGATACTATGATACAGCCCTA TGTTAAATTTTTCTT TERM 4588 4234707 - 4234747 + r 100 -13.5 -3.20011 | opp_overlap 4234708, overlap 4234705 4234703 4234701 4234700 4234708 TGAATAATATTAAAA AGGCTGTATCATAGTAATT ATA AGATACTATGATACAGCCC TATGTTAAATTTTTC TERM 4589 4234708 - 4234746 + r 100 -17 -2.50922 | opp_overlap 4234708, overlap 4234707 4234705 4234703 4234701 4234700 GAATAATATTAAAAA GGCTGTATCATAGTAATT ATA AGATACTATGATACAGCC CTATGTTAAATTTTT TERM 4590 4234746 - 4234708 - R 100 -14.9 -4.93316 | opp_overlap 4234708 4234707 4234705 4234703 4234701 4234700 GAATAATATTAAAAA GGCTGTATCATAGTA ATTATAAGA TACTATGATACAGCC CTATGTTAAATTTTT kdgA 4235384 - 4234752 - | 2-keto-3-deoxy-6-phospho-gluconate aldolase CD3627 4236395 - 4235490 - | putative dihydrodipicolinate synthase CD3628 4237023 - 4236400 - | putative sugar-phosphate isomerase TERM 4591 4236670 - 4236695 + g 72 -7.7 -3.58329 | ATTTACTTTTAGAGT CTTAAGAGTTG CTTT TAACTCTTGAG TTTCACCACTATTTG CD3629 4238328 - 4237057 - | ascorbate-specific PTS system enzyme IIC CD3630 4238642 - 4238355 - | putative PTS system, IIB component CD3631 4240744 - 4238657 - | putative transcription antiterminator TERM 4592 4240962 - 4240943 - R 100 -8 -6.02919 | overlap 4240935 TTATAAATAAAAAAA GTTTCTTT AGAC AAAGAAAC TCAAGAAAAATTGAT TERM 4593 4241028 - 4241057 + r 73 -8.8 -2.77534 | opp_overlap 4241028, overlap 4241027 TACTACAATTAAAAA GCACATTAATTT AAAATA AAATTGATGTGC CTTATCTATAATATA TERM 4594 4241057 - 4241028 - R 80 -6.6 -4.94972 | opp_overlap 4241027 4241028 TACTACAATTAAAAA GCACATTAATTT AAAATA AAATTGATGTGC CTTATCTATAATATA CD3632 4241680 - 4241159 - | putative isochorismatase CD3633 4242548 - 4241742 - | hypothetical protein TERM 4595 4242399 - 4242388 - G 71 -5.8 -4.40173 | ATCATAAATGCAAAA GTGG ATGA CCAC GCTGATATACACAAC CD3634 4243446 - 4242652 - | MerR family transcriptional regulator TERM 4596 4242971 - 4242987 + g 81 -3.7 -5.57054 | opp_overlap 4242971 4242972 4242974, overlap 4242972 ATTACTCTTCTTAAA TCAGTTA ATG TAACTGC TTTTTTTAAGTTGTT TERM 4597 4242972 - 4242986 + g 74 -7.2 -3.91792 | opp_overlap 4242972 4242971 4242974, overlap 4242971 TTACTCTTCTTAAAT CAGTTA ATG TAACTG CTTTTTTTAAGTTGT TERM 4598 4243209 - 4243238 + g 81 -4.5 -5.44198 | gap 1, overlap 4243201 GTTCCTTCTCTTCTA GTAAGAGTTCTAAA TTG TTTAT-ACTCTTAC TTTTTCTTATTTCTT CD3635 4244834 - 4243980 - | hypothetical protein CD3636 4245378 - 4244866 - | hypothetical protein CD3636A 4245595 - 4245371 - | putative phage-related protein CD3637 4246614 - 4245655 - | hypothetical protein CD3638 4248024 - 4246636 - | hypothetical protein TERM 4599 4246937 - 4246950 + g 76 -9.5 -3.14962 | overlap 4246935 TCATGAAGATTATGT GGGCC AAAT GGCCC TGGTTTTCCTAATCC TERM 4600 4248400 - 4248386 - g 71 -8.6 -2.73771 | overlap 4248385 TTATATTTCTCAAAC TGCTGT TAC ACAGCA AATAAAAGCTTTAGA CD3639 4248297 - 4249178 + | LysR family transcriptional regulator TERM 4601 4249236 - 4249204 - T 100 -8.7 -4.99861 | opp_overlap 4249204 4249199 TATTAACGATAAAAA TAGCATTAACCAT TTTTTCT ATAGTTAATGCTA TTTTCTACTATTTTA TERM 4602 4249204 - 4249236 + T 77 -6.5 -4.60713 | opp_overlap 4249204, overlap 4249199 TATTAACGATAAAAA TAGCATTAACCAT TTTTTCT ATAGTTAATGCTA TTTTCTACTATTTTA CD3640 4250358 - 4249366 - | carbohydrate kinase CD3641 4251103 - 4250363 - | hypothetical protein TERM 4603 4250567 - 4250553 - G 79 -5 -5.27335 | opp_overlap 4250557 4250560, overlap 4250557 GGTTCTAAATAAAAA TTATGC TTT GCACAA GCTTTTGCAACTTCT CD3642 4252277 - 4251168 - | putative selenocysteine synthase TERM 4604 4251579 - 4251593 + g 72 -2.9 -5.49234 | CTTTGATTGAAGCTT TACAT TATCT ATGTA TTTTTTCTTACCTAT CD3643 4253428 - 4252295 - | dihydroorotase CD3644 4254524 - 4253430 - | hypothetical protein TERM 4605 4253608 - 4253622 + g 83 -8.6 -4.05607 | CCAATCACTACATCT CCTCTT TTA AAGAGG TTCTTATTATCATGT CD3645 4255962 - 4254661 - | PTS system, IIC component TERM 4606 4256071 - 4256118 + r 100 -18.4 -5.93252 | opp_overlap 4256071, overlap 4256062 CTTATTTATTAAAAA TATTATAACATTATAATGTTTG GTTG TAAACATTATAATGTTATAATA TTTTTTGTTTTTACA TERM 4607 4256118 - 4256071 - R 100 -17.7 -4.7497 | opp_overlap 4256062 4256071 CTTATTTATTAAAAA TATTATAACATTATAATGTTT GGTTGT AAACATTATAATGTTATAATA TTTTTTGTTTTTACA TERM 4608 4256179 - 4256146 - R 81 -5.4 -5.39681 | opp_overlap 4256146, overlap 4256140 ACAACTAAACAAAAA TCCTGAGCATATTA TCATTT CAATAAACTCAGGA TTCTTATTATATTTC CD3646 4256887 - 4256186 - | GntR family transcriptional regulator TERM 4609 4256901 - 4256932 + r 75 -7.6 -3.85505 | opp_overlap 4256903, overlap 4256903 4256911 ATGATTCACCTCTTA AATTATATGTTATA ATAT TATAACATATAATC TTATATTATTAATAA TERM 4610 4256930 - 4256903 - R 89 -10.2 -3.55761 | opp_overlap 4256901 4256903 4256911 GATTCACCTCTTAAA TTATATGTTATA ATAT TATAACATATAA TCTTATATTATTAAT TERM 4611 4256903 - 4256930 + r 89 -10.2 -3.50437 | opp_overlap 4256903, overlap 4256901 4256911 GATTCACCTCTTAAA TTATATGTTATA ATAT TATAACATATAA TCTTATATTATTAAT CD3647 4257417 - 4257100 - | PTS system, IIA component CD3648 4257776 - 4257465 - | PTS system, IIB component TERM 4612 4257939 - 4257916 - R 100 -9.7 -5.24551 | opp_overlap 4257916 GCAAACTAACAAAAA CCGTATCAT TTATTT ATGATACGG TTCTCCATTATTTAT TERM 4613 4257916 - 4257939 + r 83 -9.7 -3.50541 | opp_overlap 4257916 GCAAACTAACAAAAA CCGTATCAT TTATTT ATGATACGG TTCTCCATTATTTAT CD3649 4258404 - 4257925 - | hypothetical protein TERM 4614 4258033 - 4258013 - G 72 -6.2 -4.30844 | ATCTGATGAGGAAAA GTCATCCT AGAAA AGGATAAC CTATAATCAGCCCTT CD3650 4260574 - 4258472 - | putative signaling protein TERM 4615 4258891 - 4258910 + g 95 -6.6 -5.69793 | ACATATTAGGATTTA TATCATTA CTAC TAATGATA TTTTTTATTTGCTCT TERM 4616 4260306 - 4260282 - G 77 -10.1 -2.9175 | opp_overlap 4260278, overlap 4260286 CACATTGCAACTATA GGAACAAGTAC TGT ATACTTGCTCC CATATATTTTTCCAT CD3651 4261384 - 4260587 - | putative metallo-beta-lactamase superfamily protein TERM 4617 4261460 - 4261432 - R 100 -14.9 -5.59357 | opp_overlap 4261439 ATTATACCAAAAAAA CAGAGTATTAAAT AAA ATTTAATACTCTG CACAAAATTTACTTA CD3652 4262909 - 4261503 - | putative peptidase TERM 4618 4262110 - 4262124 + g 79 -5 -5.33026 | overlap 4262098 TTTGCCACTTCAGTT GCTTTT TTA GAAAGC TTTTTATTTAAATTA TERM 4619 4262826 - 4262845 + g 80 -2.2 -5.76237 | AACATCCATATTATA CTGATTTA TTTT TGAATTAG TTTTTTCTTTGTATG TERM 4620 4263968 - 4263954 - g 88 -4.4 -5.72118 | overlap 4263947 AAAAAATATAAAAAA TTTAAA TGA TTTAAA GCAAAAAGAGGAAGA CD3653 4263091 - 4264149 + | hypothetical protein CD3654 4264158 - 4265150 + | DNA replication protein DnaC TERM 4621 4265160 - 4265176 + T 71 -5.3 -4.65895 | AAATAAAATAGCCCT TAAAAAA CAT TTTTTTA TTTTTAAATAGAGAG TERM 4622 4265177 - 4265222 + T 75 -8.6 -3.50572 | overlap 4265178 4265185 AAAAACATTTTTTTA TTTTTAAATAGAGAGGTAAG AGCAAA CTTGCTTCTCTGTTTAAAAC TTATATCACATAAAT TERM 4623 4265178 - 4265221 + T 88 -12.1 -2.70022 | overlap 4265177 4265185 AAAACATTTTTTTAT TTTTAAATAGAGAGGTAAG AGCAAA CTTGCTTCTCTGTTTAAAA CTTATATCACATAAA TERM 4624 4265489 - 4265474 - T 87 -6.2 -5.73563 | opp_overlap 4265426 4265476 ATGAAATTAAAAAAA GATACT TAAA AGTATC CTGTAACATAGAAAA TERM 4625 4265674 - 4265690 + T 72 -8.7 -2.62616 | TCGAACCTGTGACCC CCTGCTT GTA AGGCAGG TGCTCTCCCAGCTGA purA 4267492 - 4266203 - | adenylosuccinate synthetase CD3656 4267882 - 4267574 - | hypothetical protein TERM 4626 4267913 - 4267947 + r 79 -8.7 -3.66028 | opp_overlap 4267916 4267918 4267922, overlap 4267916 4267918 4267922 AATTAATATTTATAC ACAGATAAAGCAAGC CAAAA GCTTGCTTTATCTAC TTATTCACACTTATC TERM 4627 4267944 - 4267916 - R 100 -15.5 -3.02626 | opp_overlap 4267913 4267916 4267918 4267922, overlap 4267918 4267922 TAATATTTATACACA GATAAAGCAAGCC AAA AGCTTGCTTTATC TACTTATTCACACTT TERM 4628 4267916 - 4267944 + r 100 -14.8 -2.93817 | opp_overlap 4267916 4267918 4267922, overlap 4267913 4267918 4267922 TAATATTTATACACA GATAAAGCAAGC CAAAA GCTTGCTTTATC TACTTATTCACACTT TERM 4629 4267918 - 4267942 + r 90 -11.6 -3.01745 | opp_overlap 4267918 4267916 4267922, overlap 4267916 4267913 4267922 ATATTTATACACAGA TAAAGCAAGC CAAAA GCTTGCTTTA TCTACTTATTCACAC TERM 4630 4267942 - 4267918 - R 90 -12.3 -3.06261 | opp_overlap 4267916 4267913 4267918 4267922, overlap 4267916 4267922 ATATTTATACACAGA TAAAGCAAGCC AAA AGCTTGCTTTA TCTACTTATTCACAC TERM 4631 4267922 - 4267938 + r 77 -8 -4.17263 | opp_overlap 4267922 4267918 4267916, overlap 4267918 4267916 4267913 TTATACACAGATAAA GCAAGC CAAAA GCTTGC TTTATCTACTTATTC TERM 4632 4267938 - 4267922 - R 82 -8.7 -4.19483 | opp_overlap 4267918 4267916 4267913 4267922, overlap 4267918 4267916 TTATACACAGATAAA GCAAGCC AAA AGCTTGC TTTATCTACTTATTC TERM 4633 4267948 - 4267991 + r 95 -8.4 -5.10497 | gap 1, overlap 4267949 GCTTGCTTTATCTAC TTATTCACACTTATCAACAGG CCA TCTGTGGATA-GTGTGGATAG TTTTTTAGCTAAATT TERM 4634 4267949 - 4267990 + r 83 -9.7 -3.65214 | gap 1, overlap 4267948 CTTGCTTTATCTACT TATTCACACTTATCAACAGG CCA TCTGTGGATA-GTGTGGATA GTTTTTTAGCTAAAT dnaB 4269415 - 4268087 - | replicative DNA helicase rplI 4269883 - 4269434 - | 50S ribosomal protein L9 CD3659 4271878 - 4269884 - | putative RNA/single-stranded DNA exonuclease TERM 4635 4271498 - 4271510 + g 71 -4.9 -4.72846 | TTCATTTAATACTTT TCTTA AAT TAAGA TTTTTAACTATATCC CD3660 4272845 - 4271889 - | hypothetical protein TERM 4636 4272820 - 4272832 + g 72 -4.9 -4.91987 | overlap 4272830 ATTATAGACATTGCC TTAGA TAG TCTAA TTTTATTATTCAATT CD3661 4273173 - 4272853 - | hypothetical protein TERM 4637 4273260 - 4273245 - R 100 -9 -6.04953 | ATATAAACAAAAAAA CGAGCT TTAT AGCTCG CCTCATTTAGATATA TERM 4638 4273317 - 4273289 - R 73 -7.6 -3.74615 | opp_overlap 4273296, overlap 4273296 TATAAATACATATAA TAAAAAATGAGC ACAAG GCTCATTTTTTT AGTCTAATGTATATG TERM 4639 4273296 - 4273310 + r 82 -5.7 -5.59357 | opp_overlap 4273296 4273289 ACATATAATAAAAAA TGAGC ACAAG GCTCA TTTTTTTAGTCTAAT TERM 4640 4273310 - 4273296 - R 82 -5.7 -5.62045 | opp_overlap 4273296, overlap 4273289 ACATATAATAAAAAA TGAGC ACAAG GCTCA TTTTTTTAGTCTAAT rpsR 4273543 - 4273316 - | 30S ribosomal protein S18 ssb 4273996 - 4273562 - | single-strand binding protein rpsF 4274311 - 4274033 - | 30S ribosomal protein S6 TERM 4641 4274154 - 4274173 + g 71 -3 -5.26875 | gap 1, opp_overlap 4274154 4274170 AAACCTTCTGTAAAC TTAGCT-AT TGG ATAAGCTAA TTTTTTAGTTCCCCA TERM 4642 4274471 - 4274500 + r 91 -10.8 -3.62384 | opp_overlap 4274473, overlap 4274473 4274476 4274495 TATACTTTTCAAACA AACAAGGGATGG CAACAA CCATCCCTTGTA TTATATATAAGTTAT TERM 4643 4274498 - 4274473 - R 100 -14.1 -4.42062 | opp_overlap 4274471 4274473 4274476 4274495 TACTTTTCAAACAAA CAAGGGATGGC AACA ACCATCCCTTG TATTATATATAAGTT TERM 4644 4274473 - 4274498 + r 100 -13.4 -3.38314 | opp_overlap 4274473, overlap 4274471 4274476 4274495 TACTTTTCAAACAAA CAAGGGATGG CAACAA CCATCCCTTG TATTATATATAAGTT TERM 4645 4274476 - 4274495 + r 84 -9.3 -3.82061 | opp_overlap 4274473, overlap 4274473 4274471 TTTTCAAACAAACAA GGGATGG CAACAA CCATCCC TTGTATTATATATAA CD3664 4275721 - 4274525 - | putative amino acid aminotransferase TERM 4646 4275809 - 4275826 + r 70 -2.7 -5.52096 | overlap 4275804 ATTTGACATTTTTAA GTGTTAA ATTT TTATCAC TTTTTTATTAGCTTT CD3665 4276008 - 4275823 - | hypothetical protein CD3666 4276286 - 4276023 - | hypothetical protein CD3667 4276961 - 4276359 - | hypothetical protein CD3668 4278358 - 4277066 - | putative transcriptional regulator TERM 4647 4277293 - 4277309 + g 83 -2.3 -5.84011 | AGAATCTCAATGCTT TATATTC ATT GAATTTA TTTTTATTTTTTATT CD3669 4278618 - 4279193 + | hypothetical protein TERM 4648 4279222 - 4279239 + T 82 -5.5 -5.49579 | opp_overlap 4279217 4279215 4279222 4279224 4279236, overlap 4279224 TTATCAAATAGATTA GAGGTTC TTAG GAACCCC TTTTCTTTTTTGTAC TERM 4649 4279261 - 4279295 + T 86 -3.6 -6.04953 | opp_overlap 4279236 4279261, overlap 4279240 TTTTTGTACAAAAAA GGAGATGATTCAAATT TTT ATTTTGAAATATCCCC TTTTTTTATTTCTAT TERM 4650 4279295 - 4279261 - T 70 -3.6 -5.24129 | opp_overlap 4279240 4279261, overlap 4279236 TTTTTGTACAAAAAA GGAGATGATTCAAATT TTT ATTTTGAAATATCCCC TTTTTTTATTTCTAT CD3670 4280469 - 4279327 - | putative selenocysteine lyase spo0J 4281365 - 4280502 - | stage 0 sporulation protein J soj 4282140 - 4281367 - | sporulation initiation inhibitor TERM 4651 4281468 - 4281488 + g 72 -8.3 -3.37761 | overlap 4281462 TTACAGGTTTTCCAT GACTTGGAG CTT CTGCAAGTC TTACATTTCTTGGAA TERM 4652 4282253 - 4282273 + r 76 -8.4 -3.66166 | opp_overlap 4282253, overlap 4282251 4282249 4282272 TATATTACAAAAAAA GATTACTG GTAAG CAGTAATC TCTATTTTTTAGGGA TERM 4653 4282273 - 4282253 - R 100 -8.4 -5.69473 | opp_overlap 4282253 4282251 4282249 4282272 TATATTACAAAAAAA GATTACTG GTAAG CAGTAATC TCTATTTTTTAGGGA CD3673 4283060 - 4282275 - | putative stage 0 sporulation protein TERM 4654 4283159 - 4283215 + r 90 -7.8 -4.93547 | gap 1, opp_overlap 4283172 4283209, overlap 4283163 TTCCTTTATTTTTGT TTTTTTACAG-TAAGCTTAATTATTTC CTGA GAAATAATTAAGCTTACCAATAATAAA TTTTTCATTACTTAA TERM 4655 4283201 - 4283172 - R 100 -13.9 -3.25823 | opp_overlap 4283163 4283159 GTTTTTTTACAGTAA GCTTAATTATTTC CTGA GAAATAATTAAGC TTACCAATAATAAAT TERM 4656 4283242 - 4283255 + r 82 -8.1 -4.41206 | TTAATAGGATTTTTG GCTGG TTTA CCAGC TTTTCTAGGGTACTT gidA 4285829 - 4283934 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 4657 4284034 - 4284047 + g 70 -5.3 -4.5954 | ATACGAGATGCTTGC CCTAT TGAA ATAGG TTTTATATCATCTAG TERM 4658 4285102 - 4285112 + g 93 -5.4 -6.08563 | opp_overlap 4285102, overlap 4285090 4285089 GTTCTTGTTAAATAA CAAG GTT CTTG TTTTTTTTCTATATT trmE 4287303 - 4285924 - | putative tRNA modification GTPase TERM 4659 4287408 - 4287390 - R 100 -9.6 -5.45813 | opp_overlap 4287390 TATTAAAAAATAAAA CCCCCTAA TGT TTAGGAGG TTGACTTTATCTTTT jag 4288044 - 4287415 - | SpoIIIJ-associated protein TERM 4660 4287537 - 4287548 + gr 74 -3 -5.4593 | opp_overlap 4287537 ATGGATTCATATAAT CTAA TTTT TTAG TTTTTCTTGTTTTCG TERM 4661 4287910 - 4287879 - GR 77 -4.6 -5.18726 | TCTCGATAACAAAAA TTTCATAAGTACCA TCTT TAGCACCTATAAAA CCTAAAAACCCTTTA oxaA1 4288720 - 4288013 - | putative sporulation membrane protein CD3678A 4288937 - 4288752 - | hypothetical protein rnpA 4289379 - 4289035 - | ribonuclease P TERM 4662 4289447 - 4289429 - R 78 -5.9 -4.99035 | opp_overlap 4289429 4289423 TTATTTACACAAAAA GGCCACC TTTGC AGCGGCC CTTTTGTAATTAATG rpmH 4289594 - 4289457 - | 50S ribosomal protein L34