TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.704206 %AT, 2507657 nt, 12737 terms. Intergenic: 0.761137 %AT, H2T: 436194 nt, 4398 terms; T2T: 76286 nt, 2107 terms; H2H: 104623 nt, 2290 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|15081479|ref|NC_003042.1| Clostridium perfringens str. 13 plasmid pCP13, complete sequence (length 54310) soj 940 - 1692 + | Soj protein TERM 1 1718 - 1700 - f 100 -14.6 -4.2803 | opp_overlap 1693 1700 TATTTTAATTTAAAA GGTGTCCC CGG GGGACACC TAATATAAATTAGTT TERM 2 1700 - 1718 + F 100 -14.6 -2.67477 | opp_overlap 1700, overlap 1693 TATTTTAATTTAAAA GGTGTCCC CGG GGGACACC TAATATAAATTAGTT TERM 3 1901 - 1891 - g 72 -4 -5.0809 | AAGAAATGAGAAAAA TTTC TAT GAAA TAGTGGATATTGAAT parB 1751 - 3031 + | ParB protein TERM 4 3046 - 3071 + F 75 -9.1 -3.22496 | opp_overlap 3045 3043 3048 3050, overlap 3045 3044 3048 ATATGAAATATAGAT GATAGGGAGAA AAAT TTCTCCCTATA TAGTTTTATATAAAT TERM 5 3069 - 3048 - f 88 -11.7 -2.79074 | opp_overlap 3046 3045 3044 3048, overlap 3045 3043 3050 ATGAAATATAGATGA TAGGGAGAA AAAT TTCTCCCTA TATAGTTTTATATAA TERM 6 3048 - 3069 + F 93 -11.7 -3.16774 | opp_overlap 3048 3045 3043 3050, overlap 3046 3045 3044 ATGAAATATAGATGA TAGGGAGAA AAAT TTCTCCCTA TATAGTTTTATATAA TERM 7 3067 - 3050 - f 80 -9.9 -2.93326 | opp_overlap 3048 3046 3045 3044, overlap 3048 3045 3043 GAAATATAGATGATA GGGAGAA AAAT TTCTCCC TATATAGTTTTATAT PCP03 3147 - 3509 + | hypothetical protein TERM 8 3538 - 3510 - f 100 -14.7 -3.17238 | opp_overlap 3515, overlap 3515 ATATTAGATATTTAA TAAAAGGTGTCCC CGG GGGACACCTTTTT ATTATCGATAATAGA TERM 9 3515 - 3533 + F 100 -14.6 -5.20333 | opp_overlap 3510 3515 AGATATTTAATAAAA GGTGTCCC CGG GGGACACC TTTTTATTATCGATA TERM 10 3533 - 3515 - f 100 -14.6 -4.70772 | opp_overlap 3515, overlap 3510 AGATATTTAATAAAA GGTGTCCC CGG GGGACACC TTTTTATTATCGATA TERM 11 3594 - 3564 - f 100 -15.8 -5.69379 | opp_overlap 3564 3570 3590 ATAGAATTAAAAAAA TTAAAAGCAATGAT ATT ATCATTGCTTTTAA TAAATTATTAGATAT TERM 12 3564 - 3594 + F 100 -15.8 -2.66869 | opp_overlap 3564, overlap 3570 3590 ATAGAATTAAAAAAA TTAAAAGCAATGAT ATT ATCATTGCTTTTAA TAAATTATTAGATAT TERM 13 3570 - 3588 + F 95 -10.4 -4.32651 | opp_overlap 3564, overlap 3564 TTAAAAAAATTAAAA GCAATGAT ATT ATCATTGC TTTTAATAAATTATT TERM 14 3705 - 3757 + F 81 -5.8 -5.44721 | opp_overlap 3705 TGTAAATTGAATAAA CAACTTCTTCTTGGAAATAATTTG ATATA CCAATAAATTATAAGAAGAAGTTG TTTTTTTAGAGTAAT PCP04 3773 - 4024 + | transposase PCP05 4040 - 4222 + | transposase PCP06 4588 - 4746 + | transposase TERM 15 4839 - 4812 - T 100 -7.8 -5.48303 | AGAATGTTAAAAAAA GAGCCTTGAGAA AGCG TTCTAAAAGCTC TAAAATCCAAATCAA TERM 16 5161 - 5179 + T 72 -7.6 -3.50893 | TGCTCTATTATTTTA TCTTTTTA TTA TAAAAAGA TTATCCTATCTGCTT PCP07 5804 - 5169 - | ABC transporter TERM 17 5204 - 5233 + g 71 -4.5 -4.71482 | gap 1, opp_overlap 5206 5209, overlap 5194 5206 CTGCTTGTTTTGCAA CA-TAATTATCATG AGT CACGATAATTATTG TTTTTCCACTTTCAT TERM 18 5206 - 5230 + g 79 -7.3 -4.45259 | opp_overlap 5206 5209, overlap 5204 GCTTGTTTTGCAACA TAATTATCATG AGT CACGATAATTA TTGTTTTTCCACTTT TERM 19 5230 - 5206 - G 75 -9.5 -3.01712 | opp_overlap 5206 5204, overlap 5209 GCTTGTTTTGCAACA TAATTATCATG AGT CACGATAATTA TTGTTTTTCCACTTT PCP08 7966 - 5804 - | hypothetical protein TERM 20 8032 - 7989 - R 93 -12.2 -3.25823 | opp_overlap 7996 8027, overlap 7991 7996 TCCTTTTCATATTAA TATAAAAGATATCTTTAAAT TATT ATTTAAAGATACCTTTTAAA CATTAAATTACTATA TERM 21 8030 - 7991 - R 100 -14.8 -3.19602 | opp_overlap 7996 8027, overlap 7989 7996 CTTTTCATATTAATA TAAAAGATATCTTTAAAT TATT ATTTAAAGATACCTTTTA AACATTAAATTACTA TERM 22 8025 - 7996 - R 100 -10.3 -4.7219 | opp_overlap 7996, overlap 7991 7989 CATATTAATATAAAA GATATCTTTAAAT TATT ATTTAAAGATACC TTTTAAACATTAAAT TERM 23 7996 - 8025 + r 79 -8.1 -4.1466 | opp_overlap 7991 7989 7996 CATATTAATATAAAA GATATCTTTAAAT TATT ATTTAAAGATACC TTTTAAACATTAAAT PCP09 8354 - 8043 - | hypothetical protein PCP10 8779 - 9012 + | transposase TERM 24 9287 - 9260 - g 100 -7.8 -6.40073 | AATGTAAAAAAAAAA GAGCCTTGAGAA AGTG TTCTAAAAGCTC TAAAATCCAAACTAA TERM 25 9338 - 9304 - g 72 -6.7 -4.13183 | gap 1 AAAATCCAAACTAAA TGTATATTATTGCCTA TTGT TGGGCAA-AATATACA TAACAAATATTTTAG PCP11 9127 - 9366 + | transposase TERM 26 9496 - 9512 + T 80 -3.1 -5.85244 | ATATAGATTAAAATA TAGAAAA TCT TTTTTTA TTTTTTCTTTTAGTT PCP12 9973 - 9488 - | hypothetical protein TERM 27 10068 - 10092 + r 100 -11.7 -6.01187 | opp_overlap 10068 TAATTAAAGAAAAAA TATCTTCATAT TTT ATATGAAGATA TTTTTTTCTTTAATT TERM 28 10092 - 10068 - R 100 -11.7 -5.72053 | opp_overlap 10068 TAATTAAAGAAAAAA TATCTTCATAT TTT ATATGAAGATA TTTTTTTCTTTAATT PCP13 10281 - 10102 - | hypothetical protein PCP14 10439 - 11113 + | hypothetical protein TERM 29 11149 - 11121 - f 95 -11.9 -3.6363 | opp_overlap 11121 11125, overlap 11125 ATCAGTAGAAATCAA TAAAGTGGCGATT AAA AATCGTCACTTTA TTTTATATCAAAAAC TERM 30 11121 - 11149 + F 100 -14.1 -4.52589 | opp_overlap 11121 11125, overlap 11125 ATCAGTAGAAATCAA TAAAGTGGCGATT AAA AATCGTCACTTTA TTTTATATCAAAAAC TERM 31 11125 - 11145 + F 100 -10.5 -4.83243 | opp_overlap 11125 11121, overlap 11121 GTAGAAATCAATAAA GTGGCGATT AAA AATCGTCAC TTTATTTTATATCAA TERM 32 11145 - 11125 - f 82 -8.3 -4.42976 | opp_overlap 11121 11125, overlap 11121 GTAGAAATCAATAAA GTGGCGATT AAA AATCGTCAC TTTATTTTATATCAA TERM 33 11153 - 11180 + F 79 -5 -5.55698 | overlap 11154 11155 11157 ATCGTCACTTTATTT TATATCAAAAAC GGTT GTTTTTGATACG TTTTTTTGAATTATG TERM 34 11155 - 11178 + F 80 -9.8 -2.93448 | overlap 11154 11153 11157 CGTCACTTTATTTTA TATCAAAAAC GGTT GTTTTTGATA CGTTTTTTTGAATTA TERM 35 11221 - 11279 + F 95 -11.5 -3.64283 | gap 1, opp_overlap 11236, overlap 11210 11236 ATTTTTTTTGTATAA AAATGTATCAAAAAAGGTACCATAATCT ATTG AGATTATGATACC-TTTTTGATACAATA TTGTTAAGAAATTTA TERM 36 11236 - 11265 + F 100 -10.9 -4.74132 | opp_overlap 11236, overlap 11221 AAATGTATCAAAAAA GGTACCATAATCT ATTG AGATTATGATACC TTTTTGATACAATAT TERM 37 11265 - 11236 - f 100 -13.1 -5.19261 | opp_overlap 11236 11221 AAATGTATCAAAAAA GGTACCATAATCT ATTG AGATTATGATACC TTTTTGATACAATAT resP 11317 - 11886 + | resolvase PCP16 12101 - 13366 + | hypothetical protein TERM 38 13527 - 13509 - f 75 -8.8 -3.28765 | opp_overlap 13509 ATATTTTAAATTTAA GGTGTCCC ACG GGGACATC TTTTTGTTTTTAAAA TERM 39 13509 - 13527 + F 100 -11 -5.61881 | opp_overlap 13509 ATATTTTAAATTTAA GGTGTCCC ACG GGGACATC TTTTTGTTTTTAAAA cpb2 13654 - 14451 + | beta2-toxin TERM 40 14459 - 14483 + T 100 -14.5 -5.94597 | opp_overlap 14459 GTGCATAGAAAAAAA TATGAAGTGAC TAA GTCACTTCATA TTTTTTTTACTATTA TERM 41 14483 - 14459 - T 100 -14.5 -5.71712 | opp_overlap 14459 GTGCATAGAAAAAAA TATGAAGTGAC TAA GTCACTTCATA TTTTTTTTACTATTA PCP18 15123 - 14479 - | hypothetical protein TERM 42 14680 - 14665 - G 72 -6.2 -4.30177 | overlap 14657 GATTATAGGAATAAA TATTCC AAAG GGAATA AATAAAAGTAATATT PCP19 15449 - 15135 - | hypothetical protein TERM 43 15686 - 15642 - H 100 -14 -5.66338 | gap 1, opp_overlap 15648 15682, overlap 15648 AAATAGAACAAAAAA TAATAAGCCTAAGAGCATTTA ATAC TAACTGCTCTTAGGCTT-TTA TTTTAAAATTCTATT TERM 44 15648 - 15681 + H 100 -15.5 -5.10163 | opp_overlap 15642 15648 AACAAAAAATAATAA GCCTAAGAGCATTTA ATAC TAACTGCTCTTAGGC TTTTATTTTAAAATT TERM 45 15681 - 15648 - H 100 -15.5 -4.4634 | opp_overlap 15648, overlap 15642 AACAAAAAATAATAA GCCTAAGAGCATTTA ATAC TAACTGCTCTTAGGC TTTTATTTTAAAATT TERM 46 15783 - 15766 - H 82 -9.9 -3.04877 | opp_overlap 15766, overlap 15769 AAATGAATAAGGAGA GAAGAGC TAAG GCTCTTC TTTTTATTTTATTTG TERM 47 15766 - 15783 + H 100 -9.9 -5.67711 | opp_overlap 15766 15769 AAATGAATAAGGAGA GAAGAGC TAAG GCTCTTC TTTTTATTTTATTTG PCP20 16008 - 16232 + | hypothetical protein TERM 48 16263 - 16240 - f 70 -3.8 -5.24291 | overlap 16241 16242 16244 AAAATTAAAATAAAA GGCATTACCC AAAA AGGCAACACC TAACACACAATTAGA radC 16323 - 16760 + | DNA repair protein RadC TERM 49 16770 - 16797 + F 89 -10 -3.53444 | opp_overlap 16770 ATTTAATTTTAATAA TAGTGCATTGCT TGTA AGCAATGTGCTA TTTAAAAAGGAGTGA PCP22 16820 - 17137 + | hypothetical protein PCP23 17161 - 17484 + | hypothetical protein TERM 50 17498 - 17515 + F 100 -9.9 -4.83759 | opp_overlap 17498 17496 17501 AAATGAAAAAGGAGA GAAGAGC TAAG GCTCTTC TTTTTAAATTTACTT TERM 51 17515 - 17498 - f 85 -9.9 -3.22728 | opp_overlap 17498, overlap 17496 17501 AAATGAAAAAGGAGA GAAGAGC TAAG GCTCTTC TTTTTAAATTTACTT PCP24 17739 - 17942 + | hypothetical protein PCP25 18016 - 18405 + | hypothetical protein TERM 52 18420 - 18453 + F 100 -15.7 -3.48593 | opp_overlap 18420, overlap 18424 GATTTATTAAAAAAA CAAATATAGTTATGA TTAT TCATAACTATATTTG TTATGTAAGAGAATA TERM 53 18453 - 18420 - f 100 -15.7 -5.53991 | opp_overlap 18420 18424 GATTTATTAAAAAAA CAAATATAGTTATGA TTAT TCATAACTATATTTG TTATGTAAGAGAATA TERM 54 18424 - 18449 + F 100 -10.7 -4.38927 | opp_overlap 18420, overlap 18420 TATTAAAAAAACAAA TATAGTTATGA TTAT TCATAACTATA TTTGTTATGTAAGAG TERM 55 18509 - 18491 - f 79 -8.8 -3.78141 | opp_overlap 18492, overlap 18492 TAAATAAATTTCAAA GGTGTCCC CGG GGGACACT TTTAGTTAATATTAA TERM 56 18492 - 18508 + F 100 -12.3 -4.49337 | opp_overlap 18491 18492 AAATAAATTTCAAAG GTGTCCC CGG GGGACAC TTTTAGTTAATATTA TERM 57 18508 - 18492 - f 89 -12.3 -2.858 | opp_overlap 18492, overlap 18491 AAATAAATTTCAAAG GTGTCCC CGG GGGACAC TTTTAGTTAATATTA PCP26 18575 - 19642 + | hypothetical protein PCP27 19722 - 19919 + | hypothetical protein TERM 58 19992 - 19981 - g 78 -3 -5.5112 | opp_overlap 19981 TCTATGAAGAAAAAA GATA CTTA TATC TTTCCAGCTATAGTT PCP28 19969 - 20385 + | hypothetical protein TERM 59 21065 - 21050 - g 79 -7.6 -4.30043 | ACAAAGGGAAAATAA GCCAAA ATAG TTTGGC GATGACACTAAAAAC PCP29 20737 - 21495 + | hypothetical protein TERM 60 21512 - 21560 + F 100 -13.8 -3.59984 | gap 1, opp_overlap 21510 TTATTTAATGTAATT TTAAGGTATAAAAGAAGAA-ATT TTTA AATATTCTTTTTTTATACCTTAA TTATATAAATTTTAA PCP30 21612 - 22625 + | hypothetical protein PCP31 22653 - 23123 + | hypothetical protein PCP32 23328 - 23513 + | resolvase PCP33 23553 - 23795 + | hypothetical protein TERM 61 23805 - 23828 + T 90 -6.8 -5.8096 | GTATAATTTAAATGG GGAGCAATAT AATT ATGTTGTTCC TTTTTATTTTTTATA TERM 62 23883 - 23845 - T 100 -20.7 -3.30124 | opp_overlap 23845 TTTTATTTTTTATAA TTTACGCTCATTTACGA TATAC TCGTAAATGAGCGTAAA TTATAAAAAGAATAA TERM 63 23845 - 23883 + T 100 -20.7 -3.29144 | opp_overlap 23845 TTTTATTTTTTATAA TTTACGCTCATTTACGA TATAC TCGTAAATGAGCGTAAA TTATAAAAAGAATAA TERM 64 23943 - 23916 - T 78 -9.2 -3.09987 | opp_overlap 23916 TTAATATTCATGCAA TTCTTAGCCTAC TATC GTTGGCCAAGAA TCCTATTTTCAAAAT PCP34 24548 - 24051 - | hypothetical protein TERM 65 24569 - 24593 + r 93 -13.1 -2.89981 | opp_overlap 24569, overlap 24572 24575 TTTCCTTTCAAAAAA GAAGAACTATT AAA AATAGTTCTTC TATAATATCCTTATA TERM 66 24593 - 24569 - R 100 -13.1 -5.00616 | opp_overlap 24569 24572 24575 TTTCCTTTCAAAAAA GAAGAACTATT AAA AATAGTTCTTC TATAATATCCTTATA TERM 67 24572 - 24590 + r 79 -9 -3.58766 | opp_overlap 24569, overlap 24569 24575 CCTTTCAAAAAAGAA GAACTATT AAA AATAGTTC TTCTATAATATCCTT PCP35 25965 - 24604 - | hypothetical protein PCP36 27403 - 25943 - | hypothetical protein TERM 68 26066 - 26093 + g 95 -10.2 -4.05583 | opp_overlap 26072, overlap 26064 26072 TCTGTTTTCATCACT TATAAATTTATC TGAA GATAAATTTATA TCTTTTTCATATTCC TERM 69 26126 - 26150 + g 74 -7.3 -3.89411 | ACTTAAAACCTCACT CTCATTTTTTT TAT AAAAAAAAGAG TTATTAGTCTTTTCA TERM 70 26469 - 26492 + g 76 -9.8 -2.84454 | overlap 26468 TCAATTAATATTTCT TTCTCTTTTA TATT TAAAAGAGAA CTTTCAATAGTTTCT TERM 71 27436 - 27489 + r 100 -14.2 -2.73771 | opp_overlap 27441, overlap 27441 27446 27482 ACATTCATACTTTTA TAAAATTAAAGAGTGCAGCCATGT AAAAAA ACATGGAAGCACTCTTTAATTTAA ATTTACCAAGTCTAA TERM 72 27441 - 27484 + r 100 -14.1 -3.84451 | opp_overlap 27441, overlap 27436 27446 27482 CATACTTTTATAAAA TTAAAGAGTGCAGCCATGT AAAAAA ACATGGAAGCACTCTTTAA TTTAAATTTACCAAG TERM 73 27484 - 27441 - R 100 -14.1 -4.39426 | opp_overlap 27441 27436 27446 27482 CATACTTTTATAAAA TTAAAGAGTGCAGCCATGT AAAAAA ACATGGAAGCACTCTTTAA TTTAAATTTACCAAG TERM 74 27446 - 27479 + r 86 -9.6 -4.12279 | opp_overlap 27441, overlap 27441 27436 TTTTATAAAATTAAA GAGTGCAGCCATGT AAAAAA ACATGGAAGCACTC TTTAATTTAAATTTA PCP37 27670 - 27506 - | hypothetical protein TERM 75 27749 - 27721 - R 100 -13.5 -5.40072 | opp_overlap 27726, overlap 27726 TTCTTTTTAAAAAAA TAAAAGAGTATTT TAA AAATACTCTTTTA AACTTCATAATTATA TERM 76 27744 - 27726 - R 100 -9 -5.55855 | opp_overlap 27726, overlap 27721 TTTAAAAAAATAAAA GAGTATTT TAA AAATACTC TTTTAAACTTCATAA TERM 77 27726 - 27744 + r 84 -9 -4.20696 | opp_overlap 27721 27726 TTTAAAAAAATAAAA GAGTATTT TAA AAATACTC TTTTAAACTTCATAA PCP38 27965 - 27747 - | hypothetical protein PCP39 29116 - 27983 - | hypothetical protein TERM 78 28150 - 28162 + g 72 -6.3 -4.22475 | overlap 28137 TTTCAAACTTTTTTT GACTT TTT AAGTC TTCTTCTTTTACATA TERM 79 28251 - 28261 + g 76 -5.4 -5.09259 | TTGTCTTTATACGTT GTAG TTT CTAC TTTTCTTTTGCCATA TERM 80 28611 - 28587 - G 74 -5.1 -4.85618 | opp_overlap 28587 AAAGAATTAACAAAA GAACTTTTCAT ATT ATATAAAGTTC TAGGTTTAAATTTTC PCP40 29526 - 29119 - | hypothetical protein PCP41 29799 - 29533 - | hypothetical protein PCP42 30003 - 29800 - | hypothetical protein TERM 81 29858 - 29830 - G 100 -14.1 -4.42765 | overlap 29825 CTTTAAAAAATGAAA GTATTGGAACTTT TTT AAAGCTCCAATAC TAAATAAAAGATTAA TERM 82 29996 - 30010 + g 81 -10 -3.43109 | overlap 29994 ACACAAGGTGCTAGA CTAGGC AAA GCCTAG TATTTCAATGATATC PCP43 31041 - 30127 - | hypothetical protein TERM 83 31030 - 31006 - G 100 -13.1 -5.22312 | opp_overlap 31008 ATTTATAGGAAAAAA GAGCTTTATAA AAT TTATAAAGCTC TTAAAAATCACTTTA TERM 84 31008 - 31028 + g 77 -9.9 -3.0464 | opp_overlap 31006 TTATAGGAAAAAAGA GCTTTATAA AAT TTATAAAGC TCTTAAAAATCACTT PCP44 32331 - 31168 - | cell wall-binding protein TERM 85 32396 - 32368 - R 80 -3.3 -5.97575 | opp_overlap 32360 AATGTATAAAAAAAA GAAACTAAATC GCTAAAA AACTTAGTTTC TTTTTTTATTAATTT PCP45 33106 - 32417 - | hypothetical protein TERM 86 33016 - 33028 + g 81 -4.9 -5.40625 | TACTTTTAGATACAT TATCA ACT TGATA TTTTTTATATCCTAT PCP46 35009 - 33111 - | hypothetical protein TERM 87 34995 - 34972 - G 83 -6.8 -5.09225 | opp_overlap 34974, overlap 34974 ATTTTATTGAAAAAA TAGGGATTAT AATT ATAATCCCTT TTAAATATACCCATA TERM 88 34974 - 34993 + g 89 -9.4 -4.2349 | opp_overlap 34972 34974 TTTATTGAAAAAATA GGGATTAT AATT ATAATCCC TTTTAAATATACCCA TERM 89 34993 - 34974 - G 88 -9.4 -4.17608 | opp_overlap 34974, overlap 34972 TTTATTGAAAAAATA GGGATTAT AATT ATAATCCC TTTTAAATATACCCA topA 37138 - 35027 - | type I topoisomease TERM 90 35473 - 35505 + g 72 -6.5 -4.3341 | overlap 35475 ATTCTACTGTTTTTT CTTTAGATAAATTTA CAT TCAATTTATCTAATG TTTCTATTAATTTTC TERM 91 35475 - 35503 + g 74 -7.7 -3.74137 | overlap 35473 TCTACTGTTTTTTCT TTAGATAAATTTA CAT TCAATTTATCTAA TGTTTCTATTAATTT PCP48 37826 - 37182 - | hypothetical protein TERM 92 37854 - 37870 + r 100 -12.3 -4.20354 | opp_overlap 37854 TTTGAATATAAAAAA GTGTCCC CCG GGGACAC TTTTAAAATTAAGTT TERM 93 37870 - 37854 - R 100 -12.3 -5.47159 | opp_overlap 37854 TTTGAATATAAAAAA GTGTCCC CCG GGGACAC TTTTAAAATTAAGTT PCP49 38218 - 37937 - | hypothetical protein PCP50 40350 - 38221 - | hypothetical protein TERM 94 39758 - 39774 + g 71 -2.3 -5.45652 | overlap 39756 TCCTTCATATCTCCA TTAGCTA ATG TATCTAA TTTTTTCTTAAAAAT PCP51 43088 - 40347 - | hypothetical protein PCP52 43287 - 43075 - | hypothetical protein TERM 95 43317 - 43344 + r 100 -11.5 -4.74706 | opp_overlap 43317 43322 ATTTTTTTTAATTAA GTAAAGACCTT ATATTA AAGGTCTTTAC TTTTTAAATCTTAAA TERM 96 43344 - 43317 - R 95 -11.5 -3.33815 | opp_overlap 43317, overlap 43322 ATTTTTTTTAATTAA GTAAAGACCTT ATATTA AAGGTCTTTAC TTTTTAAATCTTAAA PCP53 43591 - 43355 - | hypothetical protein TERM 97 43651 - 43633 - R 100 -10.4 -6.09196 | opp_overlap 43633 TTTAAAATAAAAAAA GCGTTTTT AAT AAAAACGC TTTTTATTCTCCACT TERM 98 43633 - 43651 + r 100 -10.4 -5.19328 | opp_overlap 43633 TTTAAAATAAAAAAA GCGTTTTT AAT AAAAACGC TTTTTATTCTCCACT PCP54 43849 - 43655 - | hypothetical protein PCP55 44300 - 43842 - | Spo0A-like protein TERM 99 44201 - 44216 + g 70 -4 -4.85599 | TAATAAATTCAGAAA GGAGTT CATT AACTTC TTTTTCTAAACTAAA PCP56 45009 - 44413 - | hypothetical protein TERM 100 45169 - 45195 + r 89 -12.4 -2.79128 | opp_overlap 45174, overlap 45174 45191 TTCAAATAACCTAAA AAAAAGTGTCCC CCG GGGACACTTTTA ATTACTTTGTAATTT TERM 101 45174 - 45190 + r 100 -12.3 -4.53774 | opp_overlap 45174, overlap 45169 ATAACCTAAAAAAAA GTGTCCC CCG GGGACAC TTTTAATTACTTTGT TERM 102 45190 - 45174 - R 100 -12.3 -5.87688 | opp_overlap 45174 45169 ATAACCTAAAAAAAA GTGTCCC CCG GGGACAC TTTTAATTACTTTGT TERM 103 45245 - 45227 - R 100 -14.6 -4.18058 | opp_overlap 45227 AATCATATTTTAAAA GGTGTCCC CCG GGGACACC TTTATCTTATTATGA TERM 104 45227 - 45245 + r 100 -14.6 -4.37544 | opp_overlap 45227 AATCATATTTTAAAA GGTGTCCC CCG GGGACACC TTTATCTTATTATGA cna 49361 - 45255 - | collagen adhesin TERM 105 47823 - 47838 + g 81 -4.8 -5.34365 | GTCTTTATTTGTAGT TATAGT TGCT ACTATA TTTTTGTTATTATCA TERM 106 49496 - 49473 - R 89 -8.9 -4.67011 | opp_overlap 49473 AATTGTATTTAAAAA GAGTGCTGC CTAATT GCAACACTC TTAAATATCCTAAAT PCP58 49856 - 49506 - | hypothetical protein TERM 107 49909 - 49890 - R 87 -7.2 -5.2422 | opp_overlap 49885 49890 49892 AACTATATTAAAAAA GACTTAGA TAAA TCTAAGCC TTTTATATATAACCT TERM 108 49950 - 49934 - R 100 -12.3 -4.58283 | opp_overlap 49934 TAACCTTTTTAAAAA GTGTCCC CCG GGGACAC TTTCAATTACTTTAT TERM 109 49934 - 49950 + r 100 -12.3 -3.83816 | opp_overlap 49934 TAACCTTTTTAAAAA GTGTCCC CCG GGGACAC TTTCAATTACTTTAT PCP59 51053 - 49980 - | hypothetical protein TERM 110 50362 - 50381 + g 70 -5 -4.58685 | overlap 50351 50350 50363 TGTTCTACTGGTTTT TCAGTAGG CTTT TCTACTGG TTTTTCAACAGGTTT TERM 111 50897 - 50917 + g 70 -4.1 -4.88495 | TATCATTAATTTTCT CTGATAATG CAG TATTATTAG TTTTATTATATGTAT PCP60 51584 - 51099 - | hypothetical protein TERM 112 51777 - 51790 + H 70 -2.5 -5.51078 | opp_overlap 51770 AATAAAAACAACATT TATAT ATTG ATATA TTTTATTTTTATTTT PCP61 51897 - 53000 + | transcription regulator phage-related TERM 113 53028 - 53067 + T 100 -14.8 -2.88822 | opp_overlap 53031 53065, overlap 53023 53031 ATATTAATATTTACA TAATTACATGTAATTATA GTTA TATGATTACATGTAATTA TAATTATATAAAGAC TERM 114 53031 - 53064 + T 95 -12.1 -3.59023 | opp_overlap 53031, overlap 53023 53028 TTAATATTTACATAA TTACATGTAATTATA GTTA TATGATTACATGTAA TTATAATTATATAAA TERM 115 53064 - 53031 - T 89 -9.9 -3.5518 | opp_overlap 53023 53031 53028 TTAATATTTACATAA TTACATGTAATTATA GTTA TATGATTACATGTAA TTATAATTATATAAA PCP62 53560 - 53114 - | hypothetical protein TERM 116 53452 - 53464 + g 71 -4.9 -4.73297 | CTTTACTATTAATTT TTTCA TTA TGAAA TTTATTTATTGCTTC PCP63 54239 - 53589 - | hypothetical protein TERM 117 54025 - 54075 + g 70 -5.7 -4.30441 | gap 1, overlap 54018 54016 54003 54058 54060 TGAGAGCTGTCATTT TGACTGTTCTCAGAAAAACTAGTA TTCA TGCTA-TTTTTCTCAGCACTGTCA TTTTGACTGTTCTCA TERM 118 54058 - 54096 + g 71 -4.6 -4.72127 | overlap 54025 54060 CTAGTATTCATGCTA TTTTTCTCAGCACTGTCA TTT TGACTGTTCTCAGAAATA TTATTTTTATTATTA TERM 119 54060 - 54094 + g 74 -7.2 -3.93092 | overlap 54025 54058 AGTATTCATGCTATT TTTCTCAGCACTGTCA TTT TGACTGTTCTCAGAAA TATTATTTTTATTAT SEQUENCE gi|18308982|ref|NC_003366.1| Clostridium perfringens str. 13, complete genome (length 3031430) TERM 1 1637 - 1659 + G 76 -10 -2.83403 | opp_overlap 1635, overlap 1636 AAACTTACAGATATG TCTTTACCTA AAA TAGGTGAAGA ATTTGGTGGAAGAGA dnaA 410 - 1783 + | chromosomal replication initiation protein TERM 2 2461 - 2443 - g 74 -6.8 -4.21607 | overlap 2444 2454 CTTACCTAAGATAAA CGAGAATA TGA TATTCTCA ATAAACCAAGGAATT TERM 3 2460 - 2444 - g 70 -8.1 -3.12482 | overlap 2443 2454 TTACCTAAGATAAAC GAGAATA TGA TATTCTC AATAAACCAAGGAAT dnaN 2078 - 3178 + | DNA polymerase III subunit beta TERM 4 3196 - 3237 + F 100 -11.9 -5.95449 | gap 1, opp_overlap 3199, overlap 3197 3198 3199 TAAATTAGATTTTTA TA-ACTATGGTGAGTTTAGT ATT GCTAAACTCACCATAGACTA TTTTTTATTTTATTT TERM 5 3197 - 3235 + F 100 -12.6 -4.55111 | opp_overlap 3199, overlap 3196 3198 3199 AAATTAGATTTTTAT AACTATGGTGAGTTTAGT ATT GCTAAACTCACCATAGAC TATTTTTTATTTTAT TERM 6 3198 - 3234 + F 100 -16.1 -3.29406 | opp_overlap 3199, overlap 3197 3196 3199 AATTAGATTTTTATA ACTATGGTGAGTTTAGT ATT GCTAAACTCACCATAGA CTATTTTTTATTTTA TERM 7 3199 - 3233 + F 100 -19.6 -2.55203 | opp_overlap 3199, overlap 3198 3197 3196 ATTAGATTTTTATAA CTATGGTGAGTTTAGT ATT GCTAAACTCACCATAG ACTATTTTTTATTTT TERM 8 3233 - 3199 - f 100 -18.9 -3.32521 | opp_overlap 3199 3198 3197 3196 ATTAGATTTTTATAA CTATGGTGAGTTTAG TATTG CTAAACTCACCATAG ACTATTTTTTATTTT CPE0003 3304 - 3510 + | S4 domain protein recF 3566 - 4651 + | recombination protein F CPE0005 4665 - 4925 + | hypothetical protein gyrB 5162 - 7078 + | DNA gyrase subunit B gyrA 7100 - 9391 + | DNA gyrase subunit A CPE0008 9369 - 9620 + | hypothetical protein TERM 9 9628 - 9666 + F 100 -13.4 -5.30575 | opp_overlap 9636, overlap 9624 9636 AAAACTAATAAGTTT TAATGAAACTCTGGTGCT TTT AGCATCAGAGTTTTTTTA TTTTTTAAATTTTTC TERM 10 9658 - 9636 - f 95 -10.6 -3.91798 | opp_overlap 9636 9628 TAAGTTTTAATGAAA CTCTGGTGCT TTT AGCATCAGAG TTTTTTTATTTTTTA TERM 11 9636 - 9658 + F 100 -12.8 -6.28401 | opp_overlap 9636, overlap 9628 TAAGTTTTAATGAAA CTCTGGTGCT TTT AGCATCAGAG TTTTTTTATTTTTTA TERM 12 10370 - 10345 - f 72 -9.1 -2.61735 | overlap 10344 10352 TTAATACCGCATAAC GTTGAAAGATG GCAT CATCATTCAAC CAAAGGAGTAATCCG TERM 13 11666 - 11647 - f 75 -9.2 -2.65808 | opp_overlap 11650 11653, overlap 11644 11659 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 14 11712 - 11692 - f 72 -8.4 -3.23853 | overlap 11690 CCTTTCTAAGGAATA CATCTTAG GACAA CTAAGATG ACAATGAATTCTGGA TERM 15 11741 - 11769 + F 100 -12.7 -3.94 | overlap 11744 GATAATATCTCTGTT TAATTTTGAGAGA CTA TCTCTCAAAATTG TTCTTTGAAAATTGC TERM 16 11744 - 11766 + F 100 -12.2 -4.08958 | overlap 11741 AATATCTCTGTTTAA TTTTGAGAGA CTA TCTCTCAAAA TTGTTCTTTGAAAAT TERM 17 11822 - 11812 - f 71 -6.8 -4.18983 | opp_overlap 11818, overlap 11818 TTATAGAAACAACAA GCCA AAT TGGC AAAACCAATTTCTAT TERM 18 11999 - 12014 + F 73 -9 -2.92371 | opp_overlap 11999 11996, overlap 12001 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 19 12014 - 11999 - f 72 -9 -2.69489 | opp_overlap 11999 12001, overlap 11996 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 20 12157 - 12140 - f 90 -9.9 -3.695 | opp_overlap 12139 12138 GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTTGTGGACATAGC TERM 21 12324 - 12309 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 22 12398 - 12387 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 23 12634 - 12624 - f 71 -6.8 -4.15453 | opp_overlap 12627 GAAGCGAGGGTAAAA CCTC GTG GAGG ACCGAACCACGTTGC TERM 24 13219 - 13203 - f 82 -8.7 -4.13014 | CCCACAGGCCGAAAA CCTAAGG TTT CCTCAGG AAGGTTCGTCCGCTG TERM 25 15173 - 15154 - f 93 -9.4 -4.72986 | opp_overlap 15154 TACCTCCACCAAAAA CTCTAAAC ATTT GTTTAGAG TTTTTTTATTTTTCT TERM 26 15154 - 15173 + F 100 -9.4 -6.23317 | opp_overlap 15154 TACCTCCACCAAAAA CTCTAAAC ATTT GTTTAGAG TTTTTTTATTTTTCT CPE0009 15422 - 15625 + | hypothetical protein CPE0010 15633 - 15926 + | hypothetical protein CPE0011 16277 - 19033 + | hypothetical protein TERM 27 19073 - 19057 - f 70 -4.5 -5.02074 | opp_overlap 19072, overlap 19042 TTAGTTCTTAAAAAA TAACTAA GGA CTAGTTA AAAATTTTATATTGT TERM 28 19523 - 19507 - g 89 -6.7 -5.4148 | GAAATAACTAAAAAA TTAAATG TTC CATTTAA GAGGGTAGGACATTT TERM 29 19938 - 19926 - g 85 -2.7 -5.84381 | TTATGAACAAAAAAA TGCTT TAA AAACA TATTACCTATTATTA CPE0012 19276 - 20670 + | hypothetical protein CPE0013 20683 - 20916 + | hypothetical protein TERM 30 22397 - 22383 - g 79 -5 -5.22289 | CATTAAATATAAAAA TTCTCC AAA GGAAAA ACCACAATTTGTTCA serS 21268 - 22545 + | seryl-tRNA synthetase TERM 31 22643 - 22627 - f 100 -9.5 -5.14477 | opp_overlap 22627 TATAGAGTTAAAAAA CGGTATT TTT AATACCG TTTTTTTTATTTTTG TERM 32 22627 - 22643 + F 100 -9.5 -6.4275 | opp_overlap 22627 TATAGAGTTAAAAAA CGGTATT TTT AATACCG TTTTTTTTATTTTTG TERM 33 23098 - 23085 - g 72 -4.5 -5.00846 | opp_overlap 23093, overlap 23077 23094 GAAAGACCAGAAAAA CCTGA TAAA CCAGG AAGACCTGGATGTGG TERM 34 23107 - 23094 - g 79 -8.1 -3.99013 | opp_overlap 23093, overlap 23085 GAAAAACCTGATAAA CCAGG AAGA CCTGG ATGTGGTTGCAAATA CPE0015 22722 - 23141 + | hypothetical protein TERM 35 23176 - 23214 + F 100 -12.9 -5.89659 | opp_overlap 23181 GTTTTAAATTTTATA TAAAAGATACTGTATTT AAATC AAATATAGTATCTTTTA TTTTTATTTTTTTAT TERM 36 23209 - 23181 - f 77 -6.9 -4.55721 | opp_overlap 23176 AAATTTTATATAAAA GATACTGTATTTA AAT CAAATATAGTATC TTTTATTTTTATTTT TERM 37 23327 - 23311 - f 72 -8.7 -2.52543 | AGTTGGTTTAAGGCA CCGGTCT TGA AAACCGG CGTGCGTGTGAGCGT TERM 38 23500 - 23520 + F 100 -10.5 -5.13648 | opp_overlap 23500 GGATTCTCCGCCAAA GCATCTAGT TTT ACTAGGTGC TTTTATTTATGTTTA TERM 39 23520 - 23500 - f 75 -8.3 -3.53444 | opp_overlap 23500 GGATTCTCCGCCAAA GCATCTAGT TTT ACTAGGTGC TTTTATTTATGTTTA CPE0016 23757 - 24023 + | hypothetical protein TERM 40 24176 - 24160 - T 72 -8.7 -2.52543 | AGTTGGTTTAAGGCA CCGGTCT TGA AAACCGG CGTGCGTGTGAGCGT TERM 41 24342 - 24322 - T 100 -12.7 -4.07885 | opp_overlap 24322 GATTCTCCGCCAAAA GCATCTAGT TTT ACTAGATGC TTTTTTTTGCTTAAT TERM 42 24322 - 24342 + T 100 -12.7 -5.96521 | opp_overlap 24322 GATTCTCCGCCAAAA GCATCTAGT TTT ACTAGATGC TTTTTTTTGCTTAAT CPE0017 24535 - 24353 - | hypothetical protein TERM 43 24830 - 24796 - g 70 -8.3 -3.14257 | opp_overlap 24795, overlap 24793 TGAAAAACTAAATGA TATTAAAAATAATTC TAAGG AAATTATTTTTAATA GTAATTCTAAAATAG TERM 44 25157 - 25167 + G 74 -5.4 -4.95806 | AATAGATTTAATCAC TCTG CTT CAGA TTTTTATAGTACTTT CPE0018 24773 - 25654 + | hypothetical protein TERM 45 25663 - 25692 + T 80 -6.6 -4.95843 | opp_overlap 25663, overlap 25658 TTATTAAAGAAAAAA CTCTAATGTTAT ACACAA AAAACATTAGAG TTTTATATTTTCTGT TERM 46 25692 - 25663 - T 90 -6.6 -5.68438 | opp_overlap 25658 25663 TTATTAAAGAAAAAA CTCTAATGTTAT ACACAA AAAACATTAGAG TTTTATATTTTCTGT CPE0019 25907 - 25743 - | hypothetical protein addB 26116 - 29592 + | ATP-dependent deoxyribonuclease chain B addA 29582 - 33388 + | ATP-dependent deoxyribonuclease chain A TERM 47 33667 - 33685 + T 77 -9 -3.38786 | opp_overlap 33666, overlap 33666 ATATGAATAAAATTG CTTACTAA GGT TTAGTAAG TCTTCCTTATTGTTT papS 34920 - 33646 - | polyA polymerase family protein TERM 48 33849 - 33859 + g 79 -5.4 -5.25893 | TTGAAGCTAATATAT CAGA AAC TCTG TTTTTTAATATATCT TERM 49 35459 - 35449 - g 72 -2.6 -5.36441 | overlap 35452 TGTGGATATAAAAAA TATT CTA AATA GAGTTTTAGAGATTA CPE0023 35030 - 36022 + | CMP-binding factor TERM 50 36051 - 36020 - T 75 -8.3 -3.49295 | gap 1, opp_overlap 36028, overlap 36028 TATGAAAAAAATAAT TAAAAAAACAGCTC GTAAT GAGCTG-TTTTTTA TTTTAGTAGATTATT TERM 51 36044 - 36028 - T 100 -8 -5.73672 | opp_overlap 36028, overlap 36020 AAATAATTAAAAAAA CAGCTC GTAAT GAGCTG TTTTTTATTTTAGTA TERM 52 36028 - 36044 + T 100 -8.7 -5.83211 | opp_overlap 36028 36020 AAATAATTAAAAAAA CAGCTCG TAA TGAGCTG TTTTTTATTTTAGTA CPE0024 37214 - 36054 - | ErfK/YbiS/YcfS/YnhG family protein TERM 53 36829 - 36845 + g 75 -9.5 -2.95538 | opp_overlap 36829, overlap 36828 TTAGAAATTCCAATA TCAAAGG AAT CCTTTGA ATCTTTTATTAGAGG TERM 54 36845 - 36829 - G 76 -9.5 -3.14126 | opp_overlap 36829 36828 TTAGAAATTCCAATA TCAAAGG AAT CCTTTGA ATCTTTTATTAGAGG pepT 37407 - 38627 + | peptidase T TERM 55 38639 - 38692 + T 100 -8 -5.88476 | gap 1, opp_overlap 38640 38644, overlap 38644 ATAAGATTAAATAAA AT-AAACCTATAAATATATTTAGAT AATTA ATCAAAATATATTTATAGGTTTTAA TTTTTTATTTATTTT TERM 56 38690 - 38640 - T 100 -13.1 -4.99568 | opp_overlap 38639 38644, overlap 38644 TAAGATTAAATAAAA TAAACCTATAAATATATTTAGAT AATTA ATCAAAATATATTTATAGGTTTT AATTTTTTATTTATT TERM 57 38644 - 38686 + T 100 -13.9 -4.9251 | opp_overlap 38644 38640, overlap 38639 ATTAAATAAAATAAA CCTATAAATATATTTAGAT AATTA ATCAAAATATATTTATAGG TTTTAATTTTTTATT TERM 58 38686 - 38644 - T 100 -13.9 -4.98352 | opp_overlap 38639 38644, overlap 38640 ATTAAATAAAATAAA CCTATAAATATATTTAGAT AATTA ATCAAAATATATTTATAGG TTTTAATTTTTTATT CPE0026 39608 - 38733 - | degV family protein TERM 59 39900 - 39878 - H 100 -13.6 -3.40403 | opp_overlap 39878 TTCGCCGCACCATAA GCTTGTAACT TTA AGTTACAAGC TTTTTTATTTATATG TERM 60 39878 - 39900 + H 100 -13.6 -5.76237 | opp_overlap 39878 TTCGCCGCACCATAA GCTTGTAACT TTA AGTTACAAGC TTTTTTATTTATATG CPE0027 40045 - 41184 + | hypothetical protein TERM 61 41292 - 41263 - T 100 -15.3 -5.26316 | opp_overlap 41263 TTATTTTATAAAAAA GGAGCTTAATTAT TAAA ATAATTAAGCTCC TTTTTAACTATTTAT TERM 62 41263 - 41292 + T 100 -15.3 -4.7889 | opp_overlap 41263 TTATTTTATAAAAAA GGAGCTTAATTAT TAAA ATAATTAAGCTCC TTTTTAACTATTTAT psdD 42184 - 41300 - | phosphatidylserine decarboxylase TERM 63 42601 - 42585 - g 74 -5.3 -4.9792 | GAGCCTATAGAAAAA TTAAAAA AAC TTTTTAA AATGCAATTTGAATT CPE0029 42348 - 42917 + | TetR family transcriptional regulator TERM 64 43070 - 43087 + F 95 -8.5 -5.17054 | opp_overlap 43070 ACTGTGAAGGAAAAA CTCCATA TTTA TATGGAG TTTTTTAAATATTAT TERM 65 43087 - 43070 - f 88 -8.5 -4.86621 | opp_overlap 43070 ACTGTGAAGGAAAAA CTCCATA TTTA TATGGAG TTTTTTAAATATTAT TERM 66 43229 - 43248 + G 85 -5.8 -5.42259 | overlap 43223 TTGTGCTTCTTATTA TCTTGATA ATTT TATCAGGA TTTTTTTCAGCCTCA TERM 67 43367 - 43348 - g 70 -4.4 -4.92783 | opp_overlap 43348, overlap 43359 43360 AAGTTATTAGAAAAA TTATTAGA AGAC CCTAATAA ATTATTAGGTGGAAT hlyA 43192 - 44457 + | hemolysin-related protein CPE0031 44460 - 44891 + | cytidine/deoxycytidylate deaminase family protein TERM 68 44886 - 44909 + F 100 -12.6 -5.16133 | opp_overlap 44883 44881 44879 44886 TTCAAAGATAGACGA GGGTAAGTAA TGAT TTACTTACCC TTTTTATGTTATACT TERM 69 44909 - 44886 - f 91 -12.6 -2.78672 | opp_overlap 44886, overlap 44883 44881 44879 TTCAAAGATAGACGA GGGTAAGTAA TGAT TTACTTACCC TTTTTATGTTATACT CPE0032 44954 - 45412 + | hypothetical protein TERM 70 45422 - 45447 + F 100 -9.9 -5.42975 | opp_overlap 45425 TCATAATATTTTTAA TCAGTAGGTAA AGCT TTACTTACTGA TTTTTCTTTATGTGC CPE0033 45536 - 45901 + | hypothetical protein TERM 71 45911 - 45933 + F 79 -4.8 -5.47821 | GAGTAATGATTTTTA GTGAGTTCAA GTT TGGGGCTCAC TTTTTTTACATAAAT TERM 72 46581 - 46571 - g 74 -5.4 -4.88407 | overlap 46572 46573 TGATTTAAGCAAAAA TTGG GCA CCAA GCCCTACCTATGGAG CPE0034 46011 - 46673 + | hypothetical protein TERM 73 46706 - 46755 + T 80 -8.1 -4.34444 | opp_overlap 46709 46710, overlap 46710 TAGATTTAGATATAA AAATTGGGATATAAAAAGCTTTT GTTT ATAAGCTTTTTATATCCCATTAA TTTATATTCTATTAA TERM 74 46752 - 46709 - T 100 -14.2 -5.04597 | opp_overlap 46706 46710, overlap 46710 ATTTAGATATAAAAA TTGGGATATAAAAAGCTTTT GTTT ATAAGCTTTTTATATCCCAT TAATTTATATTCTAT TERM 75 46751 - 46710 - T 100 -17.7 -3.61674 | opp_overlap 46706 46710, overlap 46709 TTTAGATATAAAAAT TGGGATATAAAAAGCTTTT GTTT ATAAGCTTTTTATATCCCA TTAATTTATATTCTA TERM 76 46710 - 46751 + T 100 -17.7 -3.70947 | opp_overlap 46710 46709, overlap 46706 TTTAGATATAAAAAT TGGGATATAAAAAGCTTTT GTTT ATAAGCTTTTTATATCCCA TTAATTTATATTCTA yplC 48259 - 46787 - | hypothetical protein TERM 77 47230 - 47242 + g 81 -4.9 -5.43487 | GTTTAGTTCTCATTT TATTG AAC CAATA TTTTTTATATAGTTT plc 48590 - 49786 + | phospholipase C TERM 78 49826 - 49874 + F 100 -16.5 -3.24256 | opp_overlap 49831 49836, overlap 49831 49836 TTTTGGTGGTATTTA CAAAATAAAAGCTTAGGAAAGAT AAA GTCTTTCTTAAGCTTTTATTTTA CTTATTTTTAGAGAT TERM 79 49831 - 49869 + F 100 -16.4 -4.70739 | opp_overlap 49831 49836, overlap 49826 49836 GTGGTATTTACAAAA TAAAAGCTTAGGAAAGAT AAA GTCTTTCTTAAGCTTTTA TTTTACTTATTTTTA TERM 80 49869 - 49831 - f 100 -13.5 -4.42386 | opp_overlap 49831 49826 49836, overlap 49836 GTGGTATTTACAAAA TAAAAGCTTAGGAAAGA TAAAG TCTTTCTTAAGCTTTTA TTTTACTTATTTTTA TERM 81 49836 - 49864 + F 100 -11.9 -5.19998 | opp_overlap 49831 49836, overlap 49831 49826 ATTTACAAAATAAAA GCTTAGGAAAGAT AAA GTCTTTCTTAAGC TTTTATTTTACTTAT TERM 82 49864 - 49836 - f 100 -9 -5.19275 | opp_overlap 49836 49831 49826, overlap 49831 ATTTACAAAATAAAA GCTTAGGAAAGA TAAAG TCTTTCTTAAGC TTTTATTTTACTTAT TERM 83 49894 - 49918 + F 100 -13.1 -5.08255 | TTTTTAGAGATTTAG GGATTATTACT TTA AGTAATAATCC TTTTGTTTTAAGAAT cobW 49974 - 50900 + | CobW/P47K family protein CPE0038 50920 - 51504 + | hypothetical protein CPE0039 51507 - 52400 + | hypothetical protein CPE0040 52413 - 53132 + | hypothetical protein CPE0041 53398 - 54186 + | prolipoprotein diacylglyceryl transferase TERM 84 54834 - 54812 - f 75 -7.9 -3.94002 | opp_overlap 54812 54829 TATTATGTAATTAAA CTTTTAACA GAGTA TGTTAAAAG TTTTTTTTATTTTGT TERM 85 54812 - 54834 + F 100 -7.9 -6.37666 | opp_overlap 54812, overlap 54829 TATTATGTAATTAAA CTTTTAACA GAGTA TGTTAAAAG TTTTTTTTATTTTGT CPE0042 54959 - 55462 + | putative lipoprotein TERM 86 55758 - 55726 - f 86 -9.3 -3.92276 | opp_overlap 55701 55698 55732 55736, overlap 55717 55724 55727 ATGATATATAAAAGA TTCATAGATGCAAAC TAG GTTTGTATCTATGAT GGCTAAGTTTAAAAT TERM 87 55757 - 55727 - f 93 -12.8 -2.94281 | opp_overlap 55701 55698 55732 55736, overlap 55717 55726 55724 TGATATATAAAAGAT TCATAGATGCAAAC TAG GTTTGTATCTATGA TGGCTAAGTTTAAAA TERM 88 55732 - 55752 + F 73 -9.1 -2.81312 | opp_overlap 55727 55726 55724, overlap 55701 55698 55736 TATAAAAGATTCATA GATGCAAAC TAG GTTTGTATC TATGATGGCTAAGTT TERM 89 55783 - 55807 + F 100 -10.1 -5.27335 | opp_overlap 55777, overlap 55799 TAAAATGCATGTAGA GCCACATAG ATAAACA CTATGTGGC TTTTTATTTAAGGCA TERM 90 55853 - 55827 - f 80 -9.5 -3.22388 | opp_overlap 55799 55828, overlap 55828 TATTTAAGGCACTAA GGCCACATAGT TTTAC ACTATGTGGCT TTTTTATATGAAAAA TERM 91 55852 - 55828 - f 89 -13 -2.53112 | opp_overlap 55799 55828, overlap 55827 ATTTAAGGCACTAAG GCCACATAGT TTTAC ACTATGTGGC TTTTTTATATGAAAA TERM 92 55828 - 55852 + F 100 -13 -5.36441 | opp_overlap 55828 55827, overlap 55799 ATTTAAGGCACTAAG GCCACATAGT TTTAC ACTATGTGGC TTTTTTATATGAAAA brnQ 55899 - 57185 + | branched chain amino acid ABC transporter carrier protein TERM 93 57213 - 57266 + T 80 -5.9 -5.11063 | gap 3, opp_overlap 57213, overlap 57219 AAAGTTATAAAAAAA GTA-AAACTCC-A-TTAAGTAGATAT TTCAT ATGTCTACTTAAATAGGAGTTTTTAC TTTTTATTAAGTCAT TERM 94 57266 - 57213 - T 79 -3.7 -5.68039 | gap 3, opp_overlap 57213 57219 AAAGTTATAAAAAAA GT-AAAACTCC-A-TTAAGTAGATAT TTCAT ATGTCTACTTAAATAGGAGTTTTTAC TTTTTATTAAGTCAT TERM 95 57219 - 57259 + T 74 -5.1 -5.24003 | gap 2, opp_overlap 57213, overlap 57213 ATAAAAAAAGTAAAA CTCC-A-TTAAGTAGATAT TTCAT ATGTCTACTTAAATAGGAG TTTTTACTTTTTATT folA 57824 - 57339 - | dihydrofolate reductase dnaX 58015 - 59658 + | DNA polymerase III subunits gamma and tau TERM 96 60062 - 60040 - g 77 -5.6 -4.8543 | opp_overlap 60028, overlap 60028 60029 60041 60042 CAAGCTTTAGAAAAA GCTTCTGAAG AAA CTTCAGAAAA GATGGGTAAATTAAC TERM 97 60061 - 60041 - g 79 -9.1 -3.50535 | overlap 60029 60040 60042 AAGCTTTAGAAAAAG CTTCTGAAG AAA CTTCAGAAA AGATGGGTAAATTAA TERM 98 60060 - 60042 - g 78 -10.4 -2.69598 | overlap 60029 60041 60040 AGCTTTAGAAAAAGC TTCTGAAG AAA CTTCAGAA AAGATGGGTAAATTA CPE0046 59770 - 60108 + | hypothetical protein TERM 99 60134 - 60157 + F 100 -8.9 -5.28176 | opp_overlap 60134 TATTAAATTTGAAAA CTCTGCTGA AACTTC TCAGCGGAG TTTTTTATAAATAGA TERM 100 60157 - 60134 - f 75 -7.4 -4.25074 | opp_overlap 60134 TATTAAATTTGAAAA CTCTGCTGAA ACTT CTCAGCGGAG TTTTTTATAAATAGA recR 60206 - 60802 + | recombination protein RecR CPE0048 61028 - 61306 + | hypothetical protein CPE0049 61322 - 61600 + | hypothetical protein TERM 101 61629 - 61644 + F 100 -9 -6.20267 | opp_overlap 61629 TAAAAATAAAAAAAA CAGGTG ATTT CACCTG TTTTTTTATTTTTAG TERM 102 61644 - 61629 - f 100 -9 -6.4275 | opp_overlap 61629 TAAAAATAAAAAAAA CAGGTG ATTT CACCTG TTTTTTTATTTTTAG TERM 103 62286 - 62296 + G 75 -4 -5.20222 | opp_overlap 62286 TTTAGTTTAGATAAG CTTA TTA TAAG TTTTCTTTATTTCAT CPE0050 61875 - 63005 + | hypothetical protein CPE0051 63169 - 63348 + | hypothetical protein TERM 104 63406 - 63364 - f 93 -7.4 -5.67063 | gap 1 TTTAGTATAAAAAAA CTTTCTTAGAA-AATACTA AGCATA TAGTATTGTTCTGAGAAAG GAGAATTTGTATGGC CPE0052 63417 - 63599 + | hypothetical protein TERM 105 63613 - 63643 + F 95 -6.2 -6.02919 | opp_overlap 63613 AATTTATATTTGAAA GACCTTAATCAATA TTT TTTTGATAGAGGTC TTTTTTTATTTCTAA TERM 106 63888 - 63903 + G 71 -3.4 -5.19212 | opp_overlap 63888 AAGAAGAATAAGCGA TAATTT AAGG AAATTA TTTTTTACTAATAAT CPE0053 63763 - 64839 + | aminotransferase, class V TERM 107 64881 - 64831 - f 82 -9.3 -3.40784 | gap 1, opp_overlap 64843 64846, overlap 64837 64841 64846 AATGAAATTTTAGAA TTAGAATAAATCTAAGCCCACACT TATT AGTGTGGGCTTCT-TTTATACTAA ATAATTTATAAGGGG TERM 108 64843 - 64870 + F 100 -12.8 -4.4767 | opp_overlap 64841 64837 64831 64846, overlap 64846 GAATTAGAATAAATC TAAGCCCACACT TATT AGTGTGGGCTTC TTTTATACTAAATAA TERM 109 64846 - 64867 + F 100 -14.5 -4.35042 | opp_overlap 64841 64837 64831 64846, overlap 64843 TTAGAATAAATCTAA GCCCACACT TATT AGTGTGGGC TTCTTTTATACTAAA TERM 110 64867 - 64846 - f 100 -14.5 -3.39948 | opp_overlap 64846 64843, overlap 64841 64837 64831 TTAGAATAAATCTAA GCCCACACT TATT AGTGTGGGC TTCTTTTATACTAAA serA 64908 - 65813 + | putative D-3-phosphoglycerate dehydrogenase TERM 111 65985 - 65975 - g 70 -5.4 -4.66938 | opp_overlap 65975, overlap 65970 ATGGTTAATATAAAA GCTT TTA AAGC TTTAAGACCAAGAAA CPE0055 65960 - 67216 + | hypothetical protein TERM 112 67271 - 67214 - T 95 -11.9 -3.82117 | gap 1, opp_overlap 67221, overlap 67220 67221 TTCATTCATAAAATA TAAAAAGGGATATTATCCAAAATATAAT AAA ACT-TATTTTGGATAATATCCTTTTATA TTAAGCCATTTTTAA TERM 113 67265 - 67220 - T 100 -10.9 -5.32599 | gap 1, opp_overlap 67221, overlap 67214 67221 CATAAAATATAAAAA GGGATATTATCCAAAATATAAT AAA ACT-TATTTTGGATAATATCCT TTTATATTAAGCCAT TERM 114 67264 - 67221 - T 100 -14.4 -3.77119 | gap 1, opp_overlap 67221, overlap 67220 67214 ATAAAATATAAAAAG GGATATTATCCAAAATATAAT AAA ACT-TATTTTGGATAATATCC TTTTATATTAAGCCA TERM 115 67221 - 67264 + T 100 -12.9 -4.66537 | opp_overlap 67220 67214 67221 ATAAAATATAAAAAG GGATATTATCCAAAATA TAATAAAACT TATTTTGGATAATATCC TTTTATATTAAGCCA mtn 67967 - 67272 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase CPE0057 68347 - 69108 + | HesA/MoeB/ThiF family protein TERM 116 69645 - 69660 + G 70 -6.2 -4.17582 | TTAGCTGGATTGATG GTGATA TTTT TATCAC TTATATTTTTATCTT CPE0058 69399 - 70565 + | hypothetical protein CPE0059 70590 - 71528 + | GNAT family acetyltransferase TERM 117 71752 - 71737 - g 72 -4.8 -4.95155 | opp_overlap 71729, overlap 71750 CCTATATTAGAAAAA TTCTAT TATG ATAGAA ATAGATATTCTTTTC dgk2 71545 - 72231 + | deoxyguanosine kinase TERM 118 72235 - 72278 + F 76 -8.5 -3.69976 | opp_overlap 72225 72244, overlap 72239 72244 AATAATAAATAAGTT TATTTAAAAGAAGAGGATA TTTAGT TATTCTCTTCTTTTGTATA TTATTAAAGTATTTT TERM 119 72239 - 72274 + F 80 -9.3 -3.27158 | opp_overlap 72225 72244, overlap 72235 72244 ATAAATAAGTTTATT TAAAAGAAGAGGATA TTTAGT TATTCTCTTCTTTTG TATATTATTAAAGTA TERM 120 72244 - 72269 + F 81 -7 -4.73633 | opp_overlap 72244, overlap 72239 72235 TAAGTTTATTTAAAA GAAGAGGATA TTTAGT TATTCTCTTC TTTTGTATATTATTA TERM 121 72416 - 72399 - f 70 -4.9 -4.74013 | opp_overlap 72399 GTTAAACATACAAAA CTATCCA TAAA TGAATAG TAATTGAATATAATA TERM 122 72692 - 72677 - f 72 -6.1 -4.48317 | TGATAAAATAAAGAA GTCGC TTGAGG GCGAC AACGAAATGGTCTTT TERM 123 72983 - 72958 - f 72 -9.1 -2.61735 | overlap 72957 72965 TTAATACCGCATAAC GTTGAAAGATG GCAT CATCATTCAAC CAAAGGAGCAATCCG TERM 124 74277 - 74258 - f 75 -9.2 -2.65808 | opp_overlap 74261 74264, overlap 74255 74270 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 125 74352 - 74380 + F 100 -12.7 -3.94 | overlap 74355 GATAATATCTCTGTT TAATTTTGAGAGA CTA TCTCTCAAAATTG TTCTTTGAAAATTGC TERM 126 74355 - 74377 + F 100 -12.2 -4.08958 | overlap 74352 AATATCTCTGTTTAA TTTTGAGAGA CTA TCTCTCAAAA TTGTTCTTTGAAAAT TERM 127 74433 - 74423 - f 71 -6.8 -4.18983 | opp_overlap 74429, overlap 74429 TTATAGAAACAACAA GCCA AAT TGGC AAAACCAATTTCTAT TERM 128 74626 - 74611 - f 72 -9 -2.69489 | opp_overlap 74611 74613, overlap 74608 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 129 74611 - 74626 + F 73 -9 -2.92371 | opp_overlap 74611 74608, overlap 74613 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 130 74769 - 74752 - f 90 -9.9 -3.695 | opp_overlap 74751 74750 GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTTGTGGACATAAC TERM 131 74936 - 74921 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 132 75010 - 74999 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 133 75246 - 75236 - f 71 -6.8 -4.15453 | opp_overlap 75239 GAAGCGAGGGTAAAA CCTC GTG GAGG ACCGAACCACGTTGC TERM 134 75831 - 75815 - f 82 -8.7 -4.13014 | CCCACAGGCCGAAAA CCTAAGG TTT CCTCAGG AAGGTTCGTCCGCTG TERM 135 77766 - 77786 + F 100 -12.7 -5.86976 | opp_overlap 77766 ACCTCCACCATTAAA GCTATGAAC AAA GTTCATAGC TTTTTTATTTTGTAA TERM 136 77786 - 77766 - f 95 -12.7 -3.78953 | opp_overlap 77766 ACCTCCACCATTAAA GCTATGAAC AAA GTTCATAGC TTTTTTATTTTGTAA TERM 137 77921 - 77949 + F 100 -12.7 -4.90136 | GATATTGTTGTAATT TTAGAGTCATTTT TAA AAGATGACTCTAA TTTTTCATATTGATT TERM 138 78030 - 78014 - f 73 -2.3 -5.75538 | opp_overlap 78014, overlap 78008 78016 GGGAAAAAATAAAAA GTTTAAT ACA ATTAAGC ATATATTTGAACAAT CPE0061 78534 - 79856 + | integral membrane transport protein CPE0062 79983 - 80132 + | hypothetical protein TERM 139 80142 - 80171 + F 100 -13.8 -5.99154 | AATTGATATTCAGTA GCTATGAAAGAG AAATTA CTCTTTCATAGC TTTTTTTGTTTAATA TERM 140 80576 - 80566 - g 72 -2.6 -5.3671 | AACACAATTAAAAAA TAAA ATT TTTA ATGAAGATGATTTAT TERM 141 80688 - 80666 - g 72 -4.8 -4.90471 | opp_overlap 80670 80684, overlap 80669 80670 80678 AGTGAAAATAGAAAA CGAGGGGTAA GAT TTACCCTTTG GGCTCCAAGGGCAAA TERM 142 80684 - 80670 - g 70 -8.6 -2.57472 | opp_overlap 80670, overlap 80669 80666 80678 AAAATAGAAAACGAG GGGTAA GAT TTACCC TTTGGGCTCCAAGGG TERM 143 80670 - 80684 + G 77 -8.6 -3.59979 | opp_overlap 80670 80669 80666 80678 AAAATAGAAAACGAG GGGTAA GAT TTACCC TTTGGGCTCCAAGGG glgB 80480 - 82504 + | glycogen branching enzyme glgA 82532 - 83980 + | glycogen synthase TERM 144 84067 - 84057 - g 93 -5.4 -6.00086 | opp_overlap 84057 AGATTATAAAAAAAA GTTC TTA GAAC TTCATGGTATAGAAC glgP 84010 - 86445 + | glycogen phosphorylase TERM 145 86470 - 86512 + F 100 -16.1 -4.67982 | opp_overlap 86474, overlap 86474 ACAAAGTATAATCCA TAAAGCACTTATATTAATA CTATA TATTAATATAAGTGCTTTG TTTTATTAAGTAAGA TERM 146 86474 - 86508 + F 100 -14.7 -4.88795 | opp_overlap 86474, overlap 86470 AGTATAATCCATAAA GCACTTATATTAATA CTATA TATTAATATAAGTGC TTTGTTTTATTAAGT TERM 147 86508 - 86474 - f 100 -15.4 -4.00468 | opp_overlap 86474 86470 AGTATAATCCATAAA GCACTTATATTAATAC TAT ATATTAATATAAGTGC TTTGTTTTATTAAGT TERM 148 86778 - 86768 - g 72 -6.8 -4.05389 | TATAGACACTACAAA CTCC TTA GGAG TAATAAATTATTACT CPE0066 86541 - 88361 + | amylopullulanase CPE0067 88416 - 88859 + | hypothetical protein TERM 149 88870 - 88895 + F 86 -9.1 -4.46854 | AATAAATTTTAAATT GGGTACTAGGA CAAT TTCTAGTACTC TTTATTGTTAAATAA TERM 150 89532 - 89519 - g 71 -2.3 -5.38958 | ATGCATAAACAAAAA GAAGC TGAT GCTAC TATAGCAGTAATAAA glgC 89069 - 90250 + | glucose-1-phosphate adenylyltransferase glgD 90280 - 91386 + | glycogen biosynthesis protein CPE0070 91449 - 91895 + | phosphotransbutyrylase clsA 93504 - 92062 - | cardiolipin synthase TERM 151 94847 - 94835 - g 79 -7.7 -4.29106 | CGGTATATTAAGAAA TCCTG AAA CAGGA GAAATATTAAGCTCA CPE0072 93936 - 95492 + | hypothetical protein TERM 152 95579 - 95616 + F 100 -14.6 -5.88197 | opp_overlap 95572 95579 AATATAGAGTATTAA GATATAGGATTTAATA TATAAC TATTAAATCCTATATC TTTTTTTATGTTTAA TERM 153 95616 - 95579 - f 100 -14.6 -3.27661 | opp_overlap 95579, overlap 95572 AATATAGAGTATTAA GATATAGGATTTAATA TATAAC TATTAAATCCTATATC TTTTTTTATGTTTAA TERM 154 96164 - 96149 - f 72 -6.1 -4.39696 | TGTTAAACTAAGAAA GTCGC TTGAGG GCGAC AACGAAATGGTCTTT TERM 155 96455 - 96430 - f 72 -9.1 -2.61735 | overlap 96429 96437 TTAATACCGCATAAT GTTGAAAGATG GCAT CATCATTCAAC CAAAGGAGCAATCCG TERM 156 97749 - 97730 - f 75 -9.2 -2.65808 | opp_overlap 97733 97736, overlap 97727 97742 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 157 97795 - 97775 - f 72 -8.4 -3.23853 | overlap 97773 CCTTTCTAAGGAATA CATCTTAG GACAA CTAAGATG ATAATGAATTCTGGA TERM 158 97824 - 97852 + F 100 -12.7 -3.94 | overlap 97827 GATAATATCTCTGTT TAATTTTGAGAGA CTA TCTCTCAAAATTG TTCTTTGAAAATTGC TERM 159 97827 - 97849 + F 100 -12.2 -4.08958 | overlap 97824 AATATCTCTGTTTAA TTTTGAGAGA CTA TCTCTCAAAA TTGTTCTTTGAAAAT TERM 160 97905 - 97895 - f 71 -6.8 -4.18983 | opp_overlap 97901, overlap 97901 TTATAGAAACAACAA GCCA AAT TGGC AAAACCAATTTCTAT TERM 161 98097 - 98082 - f 72 -9 -2.69489 | opp_overlap 98082 98084, overlap 98079 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 162 98082 - 98097 + F 73 -9 -2.92371 | opp_overlap 98082 98079, overlap 98084 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 163 98240 - 98223 - f 90 -9.9 -3.695 | opp_overlap 98222 98221 GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTTGTGGACATAGC TERM 164 98407 - 98392 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 165 98481 - 98470 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 166 98717 - 98707 - f 71 -6.8 -4.15453 | opp_overlap 98710 GAAGCGAGGGTAAAA CCTC GTG GAGG ACCGAACCACGTTGC TERM 167 99302 - 99286 - f 82 -8.7 -4.13014 | CCCACAGGCCGAAAA CCTAAGG TTT CCTCAGG AAGGTTCGTCCGCTG TERM 168 101129 - 101112 - f 100 -9.9 -4.79223 | opp_overlap 101112 GCAGATCACCAAAAA CCTCTCT AATA AGAGAGG TTTTTTTGTATATAA TERM 169 101112 - 101129 + F 100 -9.9 -5.76633 | opp_overlap 101112 GCAGATCACCAAAAA CCTCTCT AATA AGAGAGG TTTTTTTGTATATAA CPE0073 101425 - 102009 + | transcription antiterminator CPE0074 101897 - 102274 + | transcription antiterminator TERM 170 102277 - 102306 + T 100 -10.9 -4.06633 | opp_overlap 102283, overlap 102283 AAAAAATGAATAAAT AAAAAAGCTGACT TTTA AGTCAGCTTTTTA TTATTTAACTTTATA TERM 171 102300 - 102283 - T 100 -9.9 -5.80003 | opp_overlap 102277 102283 TGAATAAATAAAAAA GCTGACT TTTA AGTCAGC TTTTTATTATTTAAC TERM 172 102283 - 102300 + T 100 -9.9 -5.38549 | opp_overlap 102283, overlap 102277 TGAATAAATAAAAAA GCTGACT TTTA AGTCAGC TTTTTATTATTTAAC CPE0075 102754 - 102497 - | hypothetical protein TERM 173 102865 - 102896 + H 83 -9.6 -3.57462 | gap 1, opp_overlap 102866, overlap 102866 102868 ATCAAATATAAAAAA ACAGGCATAAG-TCT ATT AGAACTTATGCCTGA TTTAACAGTAACATG TERM 174 102895 - 102866 - H 100 -13.1 -5.88197 | gap 1, opp_overlap 102865 102866 102868 TCAAATATAAAAAAA CAGGCATAAG-TCT ATT AGAACTTATGCCTG ATTTAACAGTAACAT TERM 175 102866 - 102895 + H 91 -13.1 -2.74263 | gap 1, opp_overlap 102866, overlap 102865 102868 TCAAATATAAAAAAA CAGGCATAAG-TCT ATT AGAACTTATGCCTG ATTTAACAGTAACAT TERM 176 102868 - 102893 + H 80 -9.9 -2.91695 | gap 1, opp_overlap 102866, overlap 102866 102865 AAATATAAAAAAACA GGCATAAG-TCT ATT AGAACTTATGCC TGATTTAACAGTAAC TERM 177 103162 - 103191 + H 100 -10.2 -5.76633 | AAATTTTGGGCATTA GCTGAAAAGAAT TACTAT GTTCTTTTCAGC TTTTTTTATGTGTGA TERM 178 103266 - 103318 + H 71 -8.2 -3.08996 | opp_overlap 103278 103293 103300 ATTTCAAAAGGAATT TCTATATAAGTATTTTATGATTAA AAATA TAGATTATAAAATGCTTATATAGG TATTCAATAGGAATA CPE0076 103447 - 104664 + | PTS system, N-acetylglucosamine-specific IIBC component CPE0077 104712 - 104897 + | hypothetical protein TERM 179 104920 - 104970 + T 100 -15.2 -3.11272 | opp_overlap 104927 104932, overlap 104922 104932 ATAAAAAATTATACT TATAAAATAAAAGCTATAAACCAT TTA ATGGTTTATGGCTTTTTATTTATA TATTCAATAATAGTA TERM 180 104922 - 104968 + T 95 -13.4 -3.11316 | opp_overlap 104927 104932, overlap 104920 104932 AAAAAATTATACTTA TAAAATAAAAGCTATAAACCAT TTA ATGGTTTATGGCTTTTTATTTA TATATTCAATAATAG TERM 181 104963 - 104927 - T 100 -11.1 -4.45485 | opp_overlap 104922 104920 104932, overlap 104932 ATTATACTTATAAAA TAAAAGCTATAAACCAT TTA ATGGTTTATGGCTTTTT ATTTATATATTCAAT TERM 182 104958 - 104932 - T 100 -11 -5.19275 | opp_overlap 104922 104920 104932, overlap 104927 ACTTATAAAATAAAA GCTATAAACCAT TTA ATGGTTTATGGC TTTTTATTTATATAT TERM 183 104932 - 104958 + T 100 -13.2 -5.4433 | opp_overlap 104932 104927, overlap 104922 104920 ACTTATAAAATAAAA GCTATAAACCAT TTA ATGGTTTATGGC TTTTTATTTATATAT CPE0078 105484 - 104966 - | TetR family transcriptional regulator TERM 184 105499 - 105487 - H 70 -7.7 -3.36803 | opp_overlap 105480 TAATTTTAGGCATAA GAAGG CCT CCTTC ATTAAAGAACTATAT TERM 185 105726 - 105708 - H 81 -9 -3.97056 | opp_overlap 105707 105708 105711, overlap 105693 GAATAATATAGTAAA TCTTATTC TTA GAATAAGA GTATTTATAGGAATA TERM 186 105708 - 105726 + H 72 -9 -2.71422 | opp_overlap 105693 105708, overlap 105707 105711 GAATAATATAGTAAA TCTTATTC TTA GAATAAGA GTATTTATAGGAATA TERM 187 106003 - 105988 - H 72 -6.1 -4.39696 | TGTTAAACTAAGAAA GTCGC TTGAGG GCGAC AACGAAATGGTCTTT TERM 188 106294 - 106269 - H 72 -9.1 -2.61735 | overlap 106268 106276 TTAATACCGCATAAC GTTGAAAGATG GCAT CATCATTCAAC CAAAGGAGCAATCCG TERM 189 107588 - 107569 - H 75 -9.2 -2.65808 | opp_overlap 107572 107575, overlap 107566 107581 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 190 107634 - 107614 - H 72 -8.4 -3.23853 | overlap 107612 CCTTTCTAAGGAATA CATCTTAG GACTA CTAAGATG ACAATGAATTCTGGA TERM 191 107663 - 107691 + H 100 -12.7 -3.94 | overlap 107666 GATAATATCTCTGTT TAATTTTGAGAGA CTA TCTCTCAAAATTG TTCTTTGAAAATTGC TERM 192 107666 - 107688 + H 100 -12.2 -4.08958 | overlap 107663 AATATCTCTGTTTAA TTTTGAGAGA CTA TCTCTCAAAA TTGTTCTTTGAAAAT TERM 193 107744 - 107734 - H 71 -6.8 -4.18983 | opp_overlap 107740, overlap 107740 TTATAGAAACAACAA GCCA AAT TGGC AAAACCAATGTCTAT TERM 194 107919 - 107934 + H 73 -9 -2.92371 | opp_overlap 107916 107919, overlap 107921 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 195 107934 - 107919 - H 72 -9 -2.69489 | opp_overlap 107919 107921, overlap 107916 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 196 108077 - 108060 - H 90 -9.9 -3.695 | opp_overlap 108059 108058 GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTTGTGGACATAGC TERM 197 108244 - 108229 - H 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 198 108318 - 108307 - H 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 199 108554 - 108544 - H 71 -6.8 -4.15453 | opp_overlap 108547 GAAGCGAGGGTAAAA CCTC GTG GAGG ACCGAACCACGTTGC TERM 200 109137 - 109121 - H 82 -8.7 -4.13014 | CCCACAGGCCGAAAA CCTAAGG TTT CCTCAGG AAGGTTCGTCCGCTG TERM 201 109597 - 109564 - H 70 -7.5 -3.35639 | AATAGGCCCAAGCAA CTGTTTAGCAGAAAC ACAG GTCTCTGCTAAAGCG TAAGCTGATGTATAG TERM 202 110947 - 110986 + H 100 -14 -5.24799 | opp_overlap 110947, overlap 110931 TTTTTTATTTAAAAA GAGTTATTAAAGAAGATA TAAA TGTCTTTTTTAATAACTC TTTTTGTATTTCTCA TERM 203 110986 - 110947 - H 93 -9.6 -4.65895 | opp_overlap 110931 110947 TTTTTTATTTAAAAA GAGTTATTAAAGAAGATA TAAA TGTCTTTTTTAATAACTC TTTTTGTATTTCTCA TERM 204 112927 - 112907 - g 71 -4.8 -4.77079 | gap 1, opp_overlap 112908 112911, overlap 112908 112909 112911 TAGAGATCAAGAAAA CGCAGAAAC TTTA GTTTCTG-G TATTGGAGAGACACA fus 111585 - 113675 + | elongation factor G TERM 205 113701 - 113730 + F 80 -6.6 -5.03994 | overlap 113717 GTAGAAATTTGGGGA GTACCATCTT AAAATTTAAA AAGATGGTAC TTTTTATGTATACAA CPE0080 114098 - 114334 + | hypothetical protein glcK 114586 - 115533 + | glucose kinase TERM 206 115548 - 115576 + F 91 -7 -5.53079 | gap 1, opp_overlap 115551, overlap 115551 ATAAATTTATATAAA TAA-GTTAGAAGT TTTT ACTTCTAACTTTA TTTTTTATATATTTT TERM 207 115551 - 115572 + F 100 -10.3 -5.16969 | opp_overlap 115551, overlap 115548 AATTTATATAAATAA GTTAGAAGT TTTT ACTTCTAAC TTTATTTTTTATATA TERM 208 115572 - 115551 - f 95 -10.3 -4.16301 | opp_overlap 115551 115548 AATTTATATAAATAA GTTAGAAGT TTTT ACTTCTAAC TTTATTTTTTATATA TERM 209 115758 - 115786 + F 100 -10.6 -4.51378 | opp_overlap 115758 115783 TGTGATTATTATAAA GACATTATATAA GTTCA TTATATAATGTC TTTTATACTATAAAT TERM 210 115786 - 115758 - f 95 -10.6 -3.99324 | opp_overlap 115758, overlap 115783 TGTGATTATTATAAA GACATTATATAA GTTCA TTATATAATGTC TTTTATACTATAAAT TERM 211 116512 - 116491 - g 76 -5.3 -5.15969 | gap 1, overlap 116493 TGCCAAGGTAAAAAA GATTTAGCTA CTT TAGCTAAA-C AATTAAACTTAGATG TERM 212 116511 - 116493 - g 84 -9 -4.20888 | overlap 116491 CCAAGGTAAAAAAGA TTTAGCTA CTT TAGCTAAA CAATTAAACTTAGAT CPE0082 116074 - 116616 + | hypothetical protein TERM 213 116672 - 116692 + F 90 -7.6 -4.93968 | opp_overlap 116672 ACTTCCTTATTAGAA GAGATGCC GTAAA GGTATCTC TTTTTACTTATGAAT TERM 214 116692 - 116713 + F 73 -3.1 -5.58179 | opp_overlap 116707, overlap 116707 GCCGTAAAGGTATCT CTTTTTACT TATG AATAAAAAG TTTTTTATTATGATA gpmA 116949 - 117572 + | phosphoglycerate mutase family protein TERM 215 117925 - 117902 - T 100 -12.6 -4.82667 | opp_overlap 117902 TGAGCACATTAAAAA TAGGGATACA ATTA TGTATCCCTA TTTTTTTAGTAAATT TERM 216 117902 - 117925 + T 100 -12.6 -5.54894 | opp_overlap 117902 TGAGCACATTAAAAA TAGGGATACA ATTA TGTATCCCTA TTTTTTTAGTAAATT iolR 118701 - 117931 - | transcription repressor of myo-inositol catabolism operon TERM 217 119432 - 119450 + G 72 -9 -2.90283 | opp_overlap 119432, overlap 119429 ATAAAGCTTTATAAA GAAAATCA ATG TGATTTTC TAATTGGTTTAGGTG TERM 218 119450 - 119432 - g 82 -9 -3.91473 | opp_overlap 119432 119429 ATAAAGCTTTATAAA GAAAATCA ATG TGATTTTC TAATTGGTTTAGGTG mdh 119183 - 120337 + | alcohol dehydrogenase alf1 120344 - 121189 + | fructose-bisphosphate aldolase iolC 121203 - 122219 + | myo-inositol catabolism protein iolB 122233 - 123000 + | myo-inositol catabolism protein TERM 219 124013 - 124001 - g 72 -6.3 -4.33165 | GTAAACGTATCAAAA TTCCA TGG TGGAA AAATGGATGCTCACA iolD 123017 - 124936 + | myo-inositol catabolism protein CPE0090 125006 - 126013 + | dehydrogenase TERM 220 126109 - 126063 - f 86 -9.6 -4.12911 | opp_overlap 126078 TAAAGGTATAAATAA GTTTTGGTCAGAAGAGCTAAAT GGG AGTTAGCTTTTCTGACAAATAC AAAGGTAATGGGGGA iolE 126132 - 127025 + | myo-inositol catabolism protein TERM 221 127087 - 127046 - f 100 -14.9 -3.53444 | gap 1, opp_overlap 127058, overlap 127042 TTGGTCAATAATGAA TTTTA-GGTAACAGCATAAT TTG ATTATGCTGTTACCACAAAA TAGGGTAGGGGGAGA TERM 222 127058 - 127074 + F 71 -8.1 -3.01924 | opp_overlap 127046 127042 GAATTTTAGGTAACA GCATAAT TTG ATTATGC TGTTACCACAAAATA CPE0092 127107 - 128696 + | putative symporter YidK CPE0093 128783 - 129832 + | dehydrogenase CPE0094 130202 - 130960 + | hypothetical protein CPE0095 131191 - 131967 + | crotonase CPE0096 132070 - 133620 + | propionate CoA-transferase TERM 223 134060 - 134048 - g 81 -4.9 -5.46657 | opp_overlap 134048, overlap 134050 134052 GAGCTTAAGAAAAAA TATCT ACC AGATA TACTTTCAGGTAAAA acdS 133724 - 134860 + | acyl-CoA dehydrogenase TERM 224 135121 - 135135 + T 90 -6.4 -5.75599 | opp_overlap 135112 135104, overlap 135104 AATAAATCATCCCTA TTACCC AAG GGGTGA TTTTTTTATGGTTTA TERM 225 135221 - 135200 - T 100 -9.5 -5.35354 | opp_overlap 135200 TATATAAGCAAAAAA CTCTATGCC TTAT AGCATAGAG TTTTTAGAAATTTTT TERM 226 135200 - 135221 + T 89 -8.8 -4.67168 | opp_overlap 135200 TATATAAGCAAAAAA CTCTATGC CTTATA GCATAGAG TTTTTAGAAATTTTT CPE0098 135612 - 135262 - | hypothetical protein gldA 136190 - 137320 + | glycerol dehydrogenase TERM 227 138738 - 138728 - g 70 -4 -4.90869 | AGCAGCAAGCAAAAA TGTT ATA AACA AAGATGAATTAACAG CPE0100 137346 - 139094 + | dihydroxyacetone kinase TERM 228 139254 - 139291 + F 75 -8.3 -3.56042 | gap 1, opp_overlap 139268, overlap 139253 139253 139268 AAATATCATAATTCT TATTAAAAATAAATTTAT TAG AT-AATTTATTTTTAATA TATATTTTTAAATAA TERM 229 139960 - 139978 + G 79 -7.6 -4.31085 | TGGTATTTTAGTCTC TATAAGAT GGG ATCTTATA TTTTGGATTAATGTA TERM 230 140426 - 140436 + G 71 -6.8 -3.91882 | TTATCAATAGTTGCT CCAC TTA GTGG TTCTCTTTCTGATAG CPE0101 139454 - 140887 + | multidrug resistance protein CPE0102 141164 - 141436 + | hypothetical protein TERM 231 141485 - 141518 + T 70 -2.5 -5.54338 | CTTTTGATGTAAAAA GACTGTATGTAATAT CCCG AAAGTGCATATAGTC TTTTTATTTTGCTTA TERM 232 141562 - 141595 + T 90 -5.5 -5.95946 | opp_overlap 141564, overlap 141564 AAATAGTAATAAAAA AAGTATAATACAATA AAAA TATTGCATTATACTC TTTTTTTATTATTAA TERM 233 141593 - 141564 - T 100 -10.3 -5.85737 | opp_overlap 141562 141564 ATAGTAATAAAAAAA GTATAATACAATA AAAA TATTGCATTATAC TCTTTTTTTATTATT TERM 234 141564 - 141593 + T 85 -8.1 -4.59954 | opp_overlap 141564, overlap 141562 ATAGTAATAAAAAAA GTATAATACAATA AAAA TATTGCATTATAC TCTTTTTTTATTATT TERM 235 141720 - 141745 + T 75 -9.3 -2.66979 | opp_overlap 141720, overlap 141719 141723 141740 TAAAGGTAGTGGAAA GTTTAAATAAA AATA TTTATTTAAAC ATTAATTAGTCTTAA TERM 236 141745 - 141720 - T 83 -9.3 -3.62864 | opp_overlap 141720 141719 141723 141740 TAAAGGTAGTGGAAA GTTTAAATAAA AATA TTTATTTAAAC ATTAATTAGTCTTAA TERM 237 141829 - 141794 - T 75 -8.5 -3.60475 | opp_overlap 141794 141794, overlap 141795 AATTTTTATTTTAAA CTTCAGGTGTAAG TAAATTAAAG CTTACACCTGAAA GTTTATGCTAATCTA TERM 238 141828 - 141795 - T 80 -9.8 -2.75963 | opp_overlap 141794 141794, overlap 141794 ATTTTTATTTTAAAC TTCAGGTGTAAG TAAATTAAAG CTTACACCTGAA AGTTTATGCTAATCT ldh 142790 - 141837 - | L-lactate dehydrogenase TERM 239 143842 - 143832 - g 85 -2.6 -5.85425 | TAAAGAAATAAAAAA TATT GAA AATA AGTATATCTTTAAGT TERM 240 144103 - 144092 - g 71 -3 -5.23292 | TTATAGAAAATAAAA CTAA GTTA TTAG AATATATTGGAGGAT CPE0104 143416 - 144591 + | hypothetical protein TERM 241 144655 - 144695 + F 81 -5.8 -5.40072 | gap 1 TAAGAGGAATATTTA TATACTAAGGAC-AAATTT AATT ATATTTAGTTCTTAGTATA TTTTTTTAGGCAGAA CPE0105 144710 - 145147 + | hypothetical protein CPE0106 145358 - 146098 + | hypothetical protein TERM 242 146104 - 146130 + F 91 -7.3 -5.58209 | opp_overlap 146104, overlap 146105 AATAAATTAAAGTTA GGACTGTATCC TCAAT GGGTACAGTCA TTTTTTTAAGTTTAC TERM 243 146105 - 146129 + F 95 -10.8 -3.93298 | opp_overlap 146104, overlap 146104 ATAAATTAAAGTTAG GACTGTATCC TCAAT GGGTACAGTC ATTTTTTTAAGTTTA TERM 244 146249 - 146232 - g 76 -2.7 -5.59962 | overlap 146226 146234 GAAAAGAAATAAAAA GTTTATC ACAA GATAAGC TAAGAGGAAGATGGA CPE0107 146210 - 147082 + | hypothetical protein TERM 245 147089 - 147124 + T 100 -14.3 -5.45802 | opp_overlap 147089 AGAGATTAGTTTAAA TGCCTAAGAAATACA ATTAAA TGTGTTTCTTAGGCA TTTTTATTTTAGAAA TERM 246 147124 - 147089 - T 95 -12.1 -3.63336 | opp_overlap 147089 AGAGATTAGTTTAAA TGCCTAAGAAATACA ATTAAA TGTGTTTCTTAGGCA TTTTTATTTTAGAAA CPE0108 148582 - 147218 - | GTP-binding protein TERM 247 148039 - 148053 + g 70 -5.8 -4.33785 | opp_overlap 148038 148035 148039, overlap 148035 148042 TATCAACAAAGCAAT CTTTAT TAG ATAAAG TTGTTTTATCAATAT TERM 248 148140 - 148151 + g 71 -2.2 -5.46129 | ATAACTAGTATAGCT GGTT TCTT AGCC TTTTTTAATTTATTA TERM 249 148841 - 148866 + r 95 -11.3 -3.72051 | opp_overlap 148841, overlap 148856 TTCGTTTCTAAACAA GTTATCCACAT AGGG GTGTGGATAAC TTTAAGGTTATTCAC TERM 250 148866 - 148841 - R 95 -10.6 -3.90744 | opp_overlap 148841 148856 TTCGTTTCTAAACAA GTTATCCACA TAGGGG TGTGGATAAC TTTAAGGTTATTCAC TERM 251 149288 - 149261 - R 100 -7.9 -5.50313 | gap 1 TATAAAACTAAAAAA GGACAAC-TCTT AAGGA AAGAAGTTGTCC ATAATAATCAAATTA CPE0109 149594 - 149310 - | hypothetical protein TERM 252 149412 - 149436 + g 71 -2.2 -5.42131 | overlap 149418 ATTAGCATTTATTTT TAATAGTGGA TAATC TCCAATATTG TTTTTTGTATCATTA TERM 253 149461 - 149475 + g 70 -8.6 -2.6063 | overlap 149458 TCATTACATCTATAG CCTTCA TTT TGAAGG TGAGTTATAACTGCA TERM 254 150072 - 150087 + r 87 -10.4 -3.16218 | opp_overlap 150072, overlap 150070 150068 150066 ATTTTCACAAAAAAA GCCAGC TTAC GCTGGC TATATATTAATTATA TERM 255 150087 - 150072 - R 100 -10.4 -5.61596 | opp_overlap 150070 150068 150066 150072 ATTTTCACAAAAAAA GCCAGC TTAC GCTGGC TATATATTAATTATA thiH 151694 - 150273 - | thiamine biosynthesis protein ThiH CPE0111 152051 - 151800 - | hypothetical protein TERM 256 153031 - 153016 - g 72 -6.2 -4.30023 | AAGTATAACAAATAA TTTAGC TAAG GCTAAA AATAGTGAAGGACAA TERM 257 153640 - 153616 - g 100 -13.1 -2.83228 | overlap 153613 CAATAAGCAAGAGGA TTCTAATTCTC AAG GAGAATTAGAA AGTAAGAACAATGGT TERM 258 154033 - 154021 - g 71 -7.7 -3.52475 | GGGAAGAGAGTATAA TCCTG AGA CAGGA AGATATGGAGATCCT CPE0112 152495 - 154060 + | hypothetical protein TERM 259 154138 - 154105 - f 95 -8.4 -5.1634 | opp_overlap 154105 ATAAATATAGAAAAA CTGTAATAGAAACA AAAAAA TGTTTTTATTACAG TTTTTTTTTATTATT TERM 260 154105 - 154138 + F 100 -10.6 -6.44931 | opp_overlap 154105 ATAAATATAGAAAAA CTGTAATAGAAACA AAAAAA TGTTTTTATTACAG TTTTTTTTTATTATT CPE0113 154209 - 154436 + | hypothetical protein TERM 261 154501 - 154488 - f 70 -2.5 -5.48825 | TAGTATTTAAAAAAA TAAAA ATGC TTTTA AATTCTACATTAAAG CPE0114 154720 - 154944 + | hypothetical protein TERM 262 155004 - 154972 - T 100 -16.6 -4.77759 | opp_overlap 154972 154976 154981, overlap 154976 154981 ATAATTTATTAAAAA TAAAGAAAAGGGGA TATTT TCCCCTTTTCTTTA TTTTGCAAAACAGTA TERM 263 154972 - 155004 + T 100 -16.6 -4.07885 | opp_overlap 154972 154976 154981, overlap 154976 154981 ATAATTTATTAAAAA TAAAGAAAAGGGGA TATTT TCCCCTTTTCTTTA TTTTGCAAAACAGTA TERM 264 155000 - 154976 - T 100 -13 -4.91852 | opp_overlap 154972 154976 154981, overlap 154972 154981 TTTATTAAAAATAAA GAAAAGGGGA TATTT TCCCCTTTTC TTTATTTTGCAAAAC TERM 265 154976 - 155000 + T 100 -13 -4.64861 | opp_overlap 154976 154972 154981, overlap 154972 154981 TTTATTAAAAATAAA GAAAAGGGGA TATTT TCCCCTTTTC TTTATTTTGCAAAAC TERM 266 154995 - 154981 - T 90 -7.1 -5.3167 | opp_overlap 154976 154972 154981, overlap 154976 154972 TAAAAATAAAGAAAA GGGGA TATTT TCCCC TTTTCTTTATTTTGC TERM 267 154981 - 154995 + T 87 -7.1 -5.26247 | opp_overlap 154981 154976 154972, overlap 154976 154972 TAAAAATAAAGAAAA GGGGA TATTT TCCCC TTTTCTTTATTTTGC CPE0115 155943 - 155002 - | N-acetylmuramoyl-L-alanine amidase TERM 268 155739 - 155758 + g 80 -2.1 -5.80248 | overlap 155742 CTTTCTCTTGGTCTA TGTTTCC CTCTTT GGAATCA TTTTTTTCTGTATTA CPE0116 157116 - 155956 - | hypothetical protein TERM 269 156905 - 156920 + g 74 -3.4 -5.36181 | TTTTTAATATTTTCA TTAATA TCAG TATTAA TTTCTTTTTTTATTT TERM 270 157165 - 157151 - R 70 -7.2 -3.76482 | opp_overlap 157151 157150 TTATATCAGTAAGAA CTAATG AAC CATTAG CTAGTTTTTTGAAGG CPE0117 158378 - 157128 - | hypothetical protein CPE0118 158494 - 159294 + | hypothetical protein TERM 271 159310 - 159335 + F 80 -6.9 -4.91977 | opp_overlap 159310 TATAGTATATATAAA GAGGCACTTCT TTTT ATAAGTGTCTC TTTTGTGTTTTAATA CPE0119 159434 - 160114 + | two-component response regulator CPE0120 160111 - 161124 + | two-component sensor histidine kinase CPE0121 161176 - 161373 + | hypothetical protein TERM 272 161487 - 161512 + F 100 -12 -4.98522 | opp_overlap 161487 ATAATAGTGAAAAAA GGTGGATTCA AATTTC TGAATCCACC TTTTTATATACCCTT TERM 273 161512 - 161487 - f 100 -12.7 -5.17054 | opp_overlap 161487 ATAATAGTGAAAAAA GGTGGATTCAA ATTT CTGAATCCACC TTTTTATATACCCTT TERM 274 161765 - 161755 - f 71 -5.4 -4.67556 | AGAATATTTTAAAAA TCAC AAT GTGA CACTTTTGTTAGTTT TERM 275 162306 - 162296 - g 72 -5.4 -4.74917 | AGGAAATAGATAAAA GAGT AAG ACTC GTTGCAGAAGCTTTA CPE0122 161923 - 162693 + | ABC transporter CPE0123 162683 - 164662 + | ABC transporter TERM 276 164701 - 164744 + T 100 -13.5 -5.47159 | opp_overlap 164695 164705 GCTTATTAATTTTAA GGGAGTGTATCAAAATA TAATAAAAAT TATTTTGATACGCTCCC TTTTTATTTATTAGG CPE0124 165400 - 164831 - | hypothetical protein TERM 277 165015 - 165041 + g 82 -6.8 -4.85177 | TTTTTTAAAATTTTA TTTTTATAACTC TTA GAATTATAAAAA TTTTTAATATGATTT CPE0125 165492 - 165704 + | hypothetical protein TERM 278 165722 - 165712 - f 72 -4 -5.40464 | opp_overlap 165712, overlap 165696 TATTATAAATAAAAA TCTA TTA TAGA TTATTTAAAGATAAA TERM 279 165765 - 165742 - f 78 -6.8 -4.73432 | opp_overlap 165742 TTAAAGATAAAGAAA GTAGGTATTT AATT AAGTACCTAC TTTTTTGTATTTATA TERM 280 165742 - 165765 + F 100 -9 -5.59879 | opp_overlap 165742 TTAAAGATAAAGAAA GTAGGTATTT AATT AAGTACCTAC TTTTTTGTATTTATA CPE0126 165999 - 166325 + | hypothetical protein TERM 281 166371 - 166344 - f 100 -11.6 -4.87786 | opp_overlap 166344 TTAAGGGTATAAAAA TAAGATTAAGAT ATTT ATCTTAATCTTA TTTTTTTATATATTA TERM 282 166344 - 166371 + F 100 -11.6 -5.80248 | opp_overlap 166344 TTAAGGGTATAAAAA TAAGATTAAGAT ATTT ATCTTAATCTTA TTTTTTTATATATTA CPE0127 166569 - 166763 + | hypothetical protein TERM 283 167372 - 167386 + G 71 -5.8 -4.39386 | TACTTTATCAGCATT TAAGTT ATC AACTTA TTTTACTGGTTTAGG CPE0128 166956 - 167585 + | hypothetical protein TERM 284 167921 - 167956 + F 100 -17.2 -5.38047 | opp_overlap 167921 TGGGAAAATCTAAAA GATAAGTGGAATGATT TAAT AGTCATTCCACTTATC TTTTTTATATAACTA TERM 285 167956 - 167921 - f 100 -15 -4.4267 | opp_overlap 167921 TGGGAAAATCTAAAA GATAAGTGGAATGATT TAAT AGTCATTCCACTTATC TTTTTTATATAACTA TERM 286 168129 - 168145 + G 70 -3.7 -5.04175 | opp_overlap 168129 ATTAAAAAAATCTAA GTCCA TATTACC TGGAC TTTTTATATGCTTAA CPE0129 168100 - 169119 + | hypothetical protein TERM 287 169134 - 169168 + F 100 -8.9 -5.2197 | opp_overlap 169134 AAAATCGTCAAAGAA GTTGGATAAAATATT TAAAC AGTATTTTATTCAAC TTTTTAATTTTTATA CPE0130 169320 - 169472 + | hypothetical protein TERM 288 169772 - 169812 + T 100 -13.6 -4.24326 | opp_overlap 169757 169782 169783, overlap 169783 TTTTTATTTTCGACA AAAAGAAAAAGGCTGTGA AGTTA TCACAGCTTTTTTCTTTG TTTTAAATGATATTT TERM 289 169802 - 169782 - T 86 -5.4 -5.69262 | opp_overlap 169772 169783, overlap 169783 CGACAAAAAGAAAAA GGCTGTGA AGTTA TCACAGCT TTTTTCTTTGTTTTA TERM 290 169783 - 169801 + T 100 -8.9 -5.88476 | opp_overlap 169782 169783, overlap 169772 GACAAAAAGAAAAAG GCTGTGA AGTTA TCACAGC TTTTTTCTTTGTTTT TERM 291 169801 - 169783 - T 81 -8.9 -3.99117 | opp_overlap 169783 169772, overlap 169782 GACAAAAAGAAAAAG GCTGTGA AGTTA TCACAGC TTTTTTCTTTGTTTT CPE0131 170721 - 169828 - | hypothetical protein TERM 292 171576 - 171590 + G 70 -5.8 -4.20883 | AATTTACTGATAGTG TTTTAG TAT CTAAAA TTTTAAGAGTTTTTG cinA 171050 - 172288 + | competence damage-inducible protein A TERM 293 172332 - 172322 - f 70 -2.6 -5.54894 | AATTGATTAAAAAAA TTAA GCT TTAA AAAATTGATTAAAAA TERM 294 172360 - 172350 - f 70 -2.6 -5.54894 | AATTGATTAAAAAAA TTAA GCT TTAA AAAATATTATTTTTA TERM 295 172430 - 172403 - f 100 -14.4 -5.66338 | opp_overlap 172403 AAAGAGAATAAAAAA TTACCCATTAAG TAAA CTTAATGGGTAA TTAATATGTGCTTAG TERM 296 172403 - 172430 + F 100 -14.4 -3.35278 | opp_overlap 172403 AAAGAGAATAAAAAA TTACCCATTAAG TAAA CTTAATGGGTAA TTAATATGTGCTTAG TERM 297 172525 - 172506 - f 76 -9.4 -2.85361 | opp_overlap 172508 172510, overlap 172503 172502 172522 TTACTTAAAAATTGA GAGAGTAT ATAA ATACTCTC TACTAGAAAAACATA TERM 298 173202 - 173182 - g 70 -4.1 -4.99861 | overlap 173176 GAGTAATTATAAAAA GGTTTTT AGCTTTA AAAAACC AAAGGGAAAAGATGT CPE0133 172988 - 173914 + | CAAX amino terminal protease family protein TERM 299 174021 - 173998 - f 100 -9.7 -5.06103 | opp_overlap 173998 ATAAGCTTTAAAAAA GGAACTGTT TGGGAG AACAGTTCC TTTTTTATTAAATTG TERM 300 173998 - 174021 + F 100 -10.4 -5.5074 | opp_overlap 173998 ATAAGCTTTAAAAAA GGAACTGTTT GGGA GAACAGTTCC TTTTTTATTAAATTG CPE0134 174180 - 174389 + | hypothetical protein rubY 174742 - 175329 + | rubrerythrin TERM 301 175403 - 175426 + T 100 -12.6 -5.64274 | opp_overlap 175391 175401 AAACTAAAACTTATT TCAGAGAGAA GAAA TTCTCTCTGA TTTTTTTATAAATAA TERM 302 175437 - 175482 + T 91 -10.7 -3.77484 | opp_overlap 175443, overlap 175431 175441 175445 TCTGATTTTTTTATA AATAAAGAGCGTATATCAAAA TAAC TTTTGATATACGCTCTATAAA TTTGAAGTTTTAATG TERM 303 175441 - 175478 + T 100 -15.9 -2.67441 | opp_overlap 175443, overlap 175437 175431 175445 ATTTTTTTATAAATA AAGAGCGTATATCAAAA TAAC TTTTGATATACGCTCTA TAAATTTGAAGTTTT TERM 304 175476 - 175443 - T 100 -18.5 -4.55295 | opp_overlap 175441 175437 175431 175445 TTTTTTATAAATAAA GAGCGTATATCAAAA TAAC TTTTGATATACGCTC TATAAATTTGAAGTT TERM 305 175445 - 175474 + T 100 -15.3 -2.98088 | opp_overlap 175443, overlap 175441 175437 175431 TTTTATAAATAAAGA GCGTATATCAAAA TAAC TTTTGATATACGC TCTATAAATTTGAAG CPE0136 176037 - 175492 - | hypothetical protein TERM 306 176346 - 176327 - H 70 -5 -4.77896 | overlap 176320 176319 TAAGGAATCTAAAAA GCTTTTAG TAAA CTGAAAGC AAAAAAGAGATAAAT CPE0137 176893 - 178449 + | ABC transporter TERM 307 178455 - 178487 + F 87 -7.1 -5.1244 | opp_overlap 178459, overlap 178459 GATTTGTTAATAATT GAAACAGCTATGACT ATA AGTTATAGCTGTTGA TTTTTATATTAATAA TERM 308 178483 - 178459 - f 93 -10.1 -3.85389 | opp_overlap 178455 178459 TGTTAATAATTGAAA CAGCTATGACT ATA AGTTATAGCTG TTGATTTTTATATTA TERM 309 178459 - 178483 + F 100 -12.3 -3.93691 | opp_overlap 178459, overlap 178455 TGTTAATAATTGAAA CAGCTATGACT ATA AGTTATAGCTG TTGATTTTTATATTA TERM 310 178600 - 178621 + F 100 -10.3 -5.03994 | opp_overlap 178600 ATTAAAATTGAAAAA GAGTTAGTT AAAA AACTAACTC TTTTTGTATATAAAA TERM 311 178621 - 178600 - f 100 -10.3 -4.88222 | opp_overlap 178600 ATTAAAATTGAAAAA GAGTTAGTT AAAA AACTAACTC TTTTTGTATATAAAA TERM 312 178676 - 178651 - f 83 -7.9 -4.59993 | opp_overlap 178656, overlap 178656 AAATGTAGAAAGAAA TAAAATTATAT GTTA ATATAATTTTA TACAAATATGTAATA TERM 313 178986 - 178976 - g 78 -4 -5.44638 | AGAAGAAAAAGAAAA TAGA AAA TCTA TAAGTGAAGTACAAG CPE0138 178710 - 179510 + | hypothetical protein TERM 314 179716 - 179696 - f 100 -9.8 -5.47914 | opp_overlap 179696 AAAAAGTACAAAAAA GCTCAAGA GTAAT TCTTGAGC TTTTTTATTGTATTA TERM 315 179696 - 179716 + F 100 -10.5 -5.64304 | opp_overlap 179696 AAAAAGTACAAAAAA GCTCAAGAG TAA TTCTTGAGC TTTTTTATTGTATTA TERM 316 179759 - 179737 - f 90 -10.6 -3.40371 | opp_overlap 179739, overlap 179739 TATTGTATTAATGAA TACCACAGGT TCT ACCTGTGGTT CTAAAAAGCTTATAG TERM 317 179739 - 179757 + F 100 -13.2 -3.30338 | opp_overlap 179737 179739 TTGTATTAATGAATA CCACAGGT TCT ACCTGTGG TTCTAAAAAGCTTAT TERM 318 179757 - 179739 - f 100 -13.2 -3.27029 | opp_overlap 179739, overlap 179737 TTGTATTAATGAATA CCACAGGT TCT ACCTGTGG TTCTAAAAAGCTTAT CPE0139 179861 - 180331 + | transposase TERM 319 180350 - 180338 - f 100 -9.1 -5.28561 | opp_overlap 180335 180338 AACAGATAATAAAAA CCCCT TTA AGGGG TAGTTAGTGTAAAAA TERM 320 180338 - 180350 + F 73 -9.1 -2.81547 | opp_overlap 180338, overlap 180335 AACAGATAATAAAAA CCCCT TTA AGGGG TAGTTAGTGTAAAAA TERM 321 180431 - 180460 + F 100 -10.1 -4.42062 | gap 1, opp_overlap 180436, overlap 180436 CCTTATAGGGCTAGA GCA-AACCACCCGT TTT ACGGGTGGTTATGA TTTGTTTAAAAAATA TERM 322 180454 - 180436 - f 100 -14.6 -3.83502 | opp_overlap 180431 180436 TAGGGCTAGAGCAAA CCACCCGT TTT ACGGGTGG TTATGATTTGTTTAA TERM 323 180436 - 180454 + F 100 -14.6 -3.72242 | opp_overlap 180436, overlap 180431 TAGGGCTAGAGCAAA CCACCCGT TTT ACGGGTGG TTATGATTTGTTTAA TERM 324 181347 - 181337 - g 70 -5.4 -4.58773 | TTTAGTAAAGGAAAA TCCA GAT TGGA AGGTTCTTATATTAA TERM 325 181819 - 181807 - g 78 -6.3 -4.84363 | CGAAACTATTAAAAA CTTCT TAT AGAAG TGCTAAACAACATAT CPE0140 180609 - 182378 + | hypothetical protein TERM 326 182418 - 182391 - T 100 -13 -3.89971 | opp_overlap 182395, overlap 182395 TAGAATTATATTAAA GAAAGTACTAAA ATTT TTTAGTACTTTC TAAGTACATAGACAT TERM 327 182414 - 182395 - T 81 -8 -4.54205 | opp_overlap 182395, overlap 182391 ATTATATTAAAGAAA GTACTAAA ATTT TTTAGTAC TTTCTAAGTACATAG TERM 328 182395 - 182414 + T 75 -8 -3.92869 | opp_overlap 182395 182391 ATTATATTAAAGAAA GTACTAAA ATTT TTTAGTAC TTTCTAAGTACATAG CPE0141 182559 - 182398 - | hypothetical protein CPE0142 182670 - 182885 + | hypothetical protein CPE0143 182876 - 183235 + | hypothetical protein TERM 329 183475 - 183463 - f 93 -4.9 -6.28967 | TATAAATAAAAAAAA GTATA CAG TATAC AGGGAAATAGAAAAA CPE0144 183767 - 184318 + | hypothetical protein TERM 330 184382 - 184423 + F 100 -11.3 -4.57482 | gap 1, opp_overlap 184380 184386, overlap 184386 AAAATAAGTAATATA TGAATGCAAGTAAATTGGAT AAT ATCT-ATTTACTTGCATTTA TTTGTTTATAAATAA TERM 331 184386 - 184419 + F 100 -9.9 -4.83246 | gap 1, opp_overlap 184380 184386, overlap 184382 TAAGTAATATATGAA TGCAAGTAAATTGGAT AAT ATCT-ATTTACTTGCA TTTATTTGTTTATAA TERM 332 184419 - 184386 - f 70 -7.7 -3.40022 | gap 1, opp_overlap 184386 184382, overlap 184380 TAAGTAATATATGAA TGCAAGTAAATTGGAT AAT AT-CTATTTACTTGCA TTTATTTGTTTATAA TERM 333 184969 - 184957 - g 85 -4.9 -5.56264 | opp_overlap 184957 TTGAAATAGAAAAAA CAAAT AAT ATTTG TTTAAAAAAGGCTTT TERM 334 185355 - 185377 + G 71 -8.6 -2.88737 | opp_overlap 185355, overlap 185354 GAATCATGGATTAGA TTTTCTAAAG AGG CTTTAGAAAG ATTTACTAGTAATTC CPE0145 184608 - 185453 + | hypothetical protein CPE0146 185482 - 186507 + | 2-keto-3-deoxygluconate kinase TERM 335 186968 - 186952 - g 70 -8.1 -3.18118 | opp_overlap 186952, overlap 186950 TCAGGGGATAATAGA TTAACTG TAG CAGTTAA TAATATAATTGATGA bglR 186571 - 188370 + | beta-D-glucuronidase TERM 336 188397 - 188419 + F 100 -7.8 -5.31072 | opp_overlap 188397 TTTTTATTTTAAAAA TTAGGTATGC ATT GTGTACCTAA TTTTTCTTATGTTAT CPE0148 188513 - 189202 + | transcriptional regulator TERM 337 189259 - 189290 + F 100 -9 -5.55769 | opp_overlap 189259 ATAGCATGGGAAAAA GTCATATAGTATTA AGAT TAATATTATGTGAC TTTTTTATTATAAAA CPE0149 189392 - 190243 + | D-mannonate oxidoreductase TERM 338 190431 - 190395 - g 82 -9 -3.99275 | gap 1, opp_overlap 190391 TTATACAATACCAAA TGTATGTGAGCT-TATT AAAG AATATAGCTCACATGCA GAAGCTTTAATTGGA TERM 339 190712 - 190683 - g 71 -5.9 -4.45765 | gap 1 TGTAAAAGCAATAAA GGCACCTATTCCAA ATG TTGAAATA-ATGCC AACTGGTGGAGTGTC CPE0150 190258 - 190866 + | 2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-ox oglutarate aldolase uxuA 190957 - 192009 + | mannonate dehydratase uxaC 192029 - 193429 + | glucuronate isomerase TERM 340 193481 - 193440 - f 75 -7.6 -3.91564 | opp_overlap 193444 193447 GATAATAATTAATAA TATAGGATGGAAATATTA TTTAAT TAAAATTTCCATTCTATA TGGGTATTATAAGAA uidB 193550 - 194941 + | glucuronide permease CPE0154 195005 - 196774 + | beta-hexosamidase A TERM 341 196870 - 196841 - f 100 -9.5 -5.3321 | opp_overlap 196841 AATCAACAATAAAAA GGCATTTTCTT TTTGGATT AAGAAAATGCC TTTTTTGTTTTAAAT TERM 342 196841 - 196870 + F 100 -9.5 -5.80951 | opp_overlap 196841 AATCAACAATAAAAA GGCATTTTCTT TTTGGATT AAGAAAATGCC TTTTTTGTTTTAAAT TERM 343 197148 - 197171 + F 81 -5.4 -5.44721 | AACAAATAATATTTG CTGTGAAAAA ATGT TTTTTGACAG TTTTTTTAAAATACT TERM 344 197329 - 197364 + F 100 -18 -5.80951 | opp_overlap 197329 GAGTTAGTGATGCAA CCGACTATATTTATAA AAAG TTATAAATATAGTCGG TTTTTTATTTTCCAT TERM 345 197364 - 197329 - f 100 -18 -3.08133 | opp_overlap 197329 GAGTTAGTGATGCAA CCGACTATATTTATAA AAAG TTATAAATATAGTCGG TTTTTTATTTTCCAT CPE0155 197405 - 199576 + | hypothetical protein CPE0156 199580 - 201148 + | putative surface protein TERM 346 201184 - 201213 + F 75 -3.8 -5.626 | opp_overlap 201184, overlap 201178 GTATATAAATAAAAA CTTCTTTTTA ATTTAAATTA TAAAAAGAAG TTTTTTTATGACATG TERM 347 201213 - 201184 - f 72 -3.8 -5.42975 | opp_overlap 201178 201184 GTATATAAATAAAAA CTTCTTTTTA ATTTAAATTA TAAAAAGAAG TTTTTTTATGACATG TERM 348 201384 - 201406 + F 72 -4.9 -4.98857 | ATTACACTTATTGCT CTAGGATTT TTGTT ATATCCTAG TTTTTCTAATTACAT CPE0157 201393 - 202148 + | sortase CPE0158 202217 - 203128 + | hypothetical protein CPE0159 203688 - 204281 + | hypothetical protein CPE0160 204516 - 205067 + | hypothetical protein CPE0161 206738 - 205272 - | hypothetical protein TERM 349 207143 - 207168 + H 100 -6.3 -6.47325 | opp_overlap 207143 TAAAACTGAAAAAAA CTGGTTTTTAT TTAT GTAAAAATCAG TTTTTTTTGTTTTTT TERM 350 207168 - 207143 - H 73 -3.4 -5.61824 | opp_overlap 207143 TAAAACTGAAAAAAA CTGGTTTTTA TTTATG TAAAAATCAG TTTTTTTTGTTTTTT TERM 351 207519 - 207530 + G 70 -4.4 -4.8622 | overlap 207510 GCATTGGCAGGAGCC GCTT GTGC AAGC TTTTTAGTTGAGGCA pfoR 207408 - 208439 + | regulatory protein TERM 352 208457 - 208496 + F 87 -6.6 -5.40004 | opp_overlap 208457 AAAAATATAATATTA GGGATGTATCAAAATA ACTTTATA TATTTTGGTGCACCCC TTTTTTAATTTAATC pfoA 209028 - 210530 + | perfringolysin O TERM 353 210582 - 210532 - f 100 -15.2 -4.00868 | opp_overlap 210545, overlap 210545 TTACTTACAATTAAA CTAAAGTAAAAAACTGATTTTAGC TAG GCTAAAATCAGTTTTTTATTTCAT ATTTTAGAGTTATAA TERM 354 210545 - 210569 + F 100 -14.5 -5.69793 | opp_overlap 210532 210545 AACTAAAGTAAAAAA CTGATTTTAGC TAG GCTAAAATCAG TTTTTTATTTCATAT TERM 355 210569 - 210545 - f 100 -14.5 -5.41359 | opp_overlap 210545, overlap 210532 AACTAAAGTAAAAAA CTGATTTTAGC TAG GCTAAAATCAG TTTTTTATTTCATAT CPE0164 210726 - 211184 + | hypothetical protein CPE0165 211256 - 211423 + | hypothetical protein TERM 356 211456 - 211490 + F 83 -3.1 -6.11229 | CCAATTTAAAGAAGA TAGAGTTATGATT CATTAAGGA AATTATAGCTCTA TTTTTTTATTTTAAT TERM 357 211789 - 211779 - f 76 -2.6 -5.81622 | overlap 211788 ATAAAATCAAAAAAA TATA AAT TATA ATAAATTATTAAGGA TERM 358 212172 - 212186 + F 79 -8.6 -4.0616 | opp_overlap 212172 212171 ATAATGTCAGAAAAC GTTTCC CAA GGAAAC TTTATACTTAAAATA TERM 359 212186 - 212172 - f 72 -8.6 -3.25592 | opp_overlap 212172, overlap 212171 ATAATGTCAGAAAAC GTTTCC CAA GGAAAC TTTATACTTAAAATA CPE0166 212226 - 213713 + | membrane-spanning transporter protein TERM 360 213790 - 213741 - f 86 -9.2 -3.9392 | opp_overlap 213755 213758, overlap 213739 213747 213751 CAAAATTATAAAAGA TATCAATTA-AGGAATAAGCTATA AAAA TATAGCTTATTCCTATAACT-ATA AATTTATTTAGAAAT TERM 361 213785 - 213747 - f 95 -12.9 -3.4791 | gap 1, opp_overlap 213755 213758, overlap 213741 213739 213751 TATAAAAGATATCAA TTA-AGGAATAAGCTATA AAAA TATAGCTTATTCCTATAA CTATAAATTTATTTA TERM 362 213780 - 213751 - f 100 -15.3 -3.46202 | opp_overlap 213755 213758, overlap 213747 213741 213739 AAAGATATCAATTAA GGAATAAGCTATA AAAA TATAGCTTATTCC TATAACTATAAATTT TERM 363 213755 - 213776 + F 75 -8.9 -3.28912 | opp_overlap 213751 213747 213741 213739, overlap 213758 ATATCAATTAAGGAA TAAGCTATA AAAA TATAGCTTA TTCCTATAACTATAA TERM 364 214856 - 214846 - g 74 -6.8 -4.21319 | ACCAAGTTCAACAAA CTGG CAA CCAG TTGCAAAACTTAGAC pbg 213872 - 215941 + | beta-galactosidase TERM 365 216044 - 216069 + F 93 -9.1 -4.7878 | opp_overlap 216044 216046 216048 GAATTTTTTATATGA GACAGTTAAGT GAAA ACTTACCTGTC TTTATTTTATCAATA TERM 366 216069 - 216044 - f 72 -9.1 -2.62933 | opp_overlap 216044, overlap 216046 216048 GAATTTTTTATATGA GACAGTTAAGT GAAA ACTTACCTGTC TTTATTTTATCAATA TERM 367 216565 - 216545 - g 82 -6.9 -4.89233 | TAGGAAGATTAAAAA CAGTTCTAT TAC ATAGACCTG GAGAAGAAATTGAAA arcA 216493 - 217734 + | arginine deiminase TERM 368 218592 - 218575 - g 74 -7.1 -3.95073 | GCTTATATCCAGAAA GAGTTAA ATTA TTAACTC CATACAAAGTTACTA arcB 217842 - 218837 + | ornithine carbamoyltransferase arcD 218982 - 220418 + | arginine/ornithine antiporter arcC 220479 - 221423 + | carbamate kinase argR 221496 - 221951 + | arginine repressor TERM 369 221981 - 221962 - f 73 -8 -3.75718 | TTTAATTAAAAGCAA TTAACTCT ACAA AGAGTTAA GAATAAATATTAATA TERM 370 222304 - 222294 - f 80 -2.6 -6.07374 | opp_overlap 222294 ACAAAAAATAAAAAA TAAT AGG ATTA TTTAGAAATGACATA TERM 371 222371 - 222355 - f 76 -4.5 -5.32944 | GTTATAATTAAAAAA GTTACTA AAT TAATAAC AAATGGTGAATGATT colA 222495 - 225809 + | collagenase mscL 226415 - 225957 - | large-conductance mechanosensitive channel TERM 372 226527 - 226507 - H 73 -2.7 -5.63236 | overlap 226509 ATCTAAAAATAAAAA TTTTTATTA AAA TAATAAACA AATTGTAACAGATAT TERM 373 227004 - 227035 + H 100 -16.8 -6.09196 | overlap 226997 TGGAACCGCGAGTTA CCTCGTCTCTATAG ATTT TTATAGAGACGAGG TTTTTTTATTTTAAA TERM 374 227426 - 227404 - g 88 -8.6 -4.4078 | overlap 227418 TTCTGCCAAGGAAAA TGAGATAAAT AAT ATTTATCCCA TAAAAGGAGAACTTG ycgJ 227207 - 227782 + | methyltransferase, UbiE/COQ5 family metB 227846 - 229000 + | cystathionine beta-lyase cysK 228987 - 229895 + | cysteine synthase family protein luxS 229993 - 230448 + | S-ribosylhomocysteinase TERM 375 230515 - 230465 - f 95 -13 -3.61774 | opp_overlap 230472, overlap 230471 CATAATATTTTTAAA TTTAAAGGGCTATATTAAAACTAT TAA ATTGTTTTGATATAGCCTTTTAAA AATGTTAGAATCTTC TERM 376 230509 - 230471 - f 75 -7.6 -3.84719 | opp_overlap 230472, overlap 230465 ATTTTTAAATTTAAA GGGCTATATTAAAACTAT TAA ATTGTTTTGATATAGCCT TTTAAAAATGTTAGA TERM 377 230472 - 230508 + F 100 -13.3 -4.14472 | opp_overlap 230471 230465 TTTTTAAATTTAAAG GGCTATATTAAAACTAT TAA ATTGTTTTGATATAGCC TTTTAAAAATGTTAG TERM 378 230978 - 230961 - f 81 -7.1 -4.87133 | AGTGTTTAAAGAAAA TCTAAGT GCGT ACTTAGA AGCGAAAACCAAGCA TERM 379 231271 - 231255 - g 73 -8.1 -3.40175 | overlap 231253 ATTGTGGAAAAGATA GCTAAAT GCA ATTTAGC ATGTAAAATTTATAA lipA 231156 - 232166 + | lipase TERM 380 232259 - 232215 - T 100 -14.5 -4.99035 | opp_overlap 232216, overlap 232216 GGATGGAGATAAAAA GGAGGCTTACCTTAAAGCA TGTTATG TGCTATAAGGTAAGCCTCT TTTTATTATATGAAT TERM 381 232258 - 232216 - T 100 -18 -3.58698 | opp_overlap 232216, overlap 232215 GATGGAGATAAAAAG GAGGCTTACCTTAAAGCA TGTTATG TGCTATAAGGTAAGCCTC TTTTTATTATATGAA TERM 382 232216 - 232258 + T 100 -19.4 -5.24796 | opp_overlap 232216 232215 GATGGAGATAAAAAG GAGGCTTACCTTAAAGCATG TTA TGTGCTATAAGGTAAGCCTC TTTTTATTATATGAA TERM 383 232349 - 232362 + T 71 -6.7 -4.1337 | opp_overlap 232349 TAACTAATTTATATA GTAGC TTAT GCTAC TTGTTTATACTATAG CPE0180 233179 - 232388 - | hypothetical protein CPE0181 234002 - 233184 - | hypothetical protein TERM 384 233887 - 233875 - G 72 -4.9 -4.90778 | GCTATCCAAAGAAAA TAAGT AAC ACTTA TCATAATTAATTGTC CPE0182 235030 - 234005 - | ABC transporter ATP-binding protein TERM 385 234216 - 234256 + g 71 -2.1 -5.38497 | overlap 234229 234250 GGTATATTACTTTCA GATTTTAAAATTTCCTTAA TGT TTAGTAAGGTTTTAAAATC TTTTTTACTTTGAAT TERM 386 235723 - 235709 - g 76 -5 -5.17353 | overlap 235710 AGATGTATTAAAAAA CTTCCA AGT TGGAAA GTTAGAAGCTGATGA CPE0183 235341 - 236009 + | nitroreductase family protein TERM 387 236035 - 236080 + F 91 -7.2 -5.626 | gap 1, opp_overlap 236035 236034 TTTCTAAATTAAAAT GAGC-TGTATCAATATATATT AATAA AAAATATTTTGATACATGCTC TTTTTTTATGAAATA TERM 388 236472 - 236457 - g 80 -6.2 -5.00851 | opp_overlap 236456, overlap 236469 236470 ATTAATGAAATAAAA GAAGTT ACTA AACTTC CTATCATTGGAATAA nanP 236295 - 236960 + | N-acetylmannosamine-6-phosphate 2-epimerase nanA 236997 - 237863 + | N-acetylneuraminate lyase TERM 389 237940 - 237909 - f 100 -12.6 -4.21322 | gap 1, overlap 237911 TTAAGAGAAATGAAA TA-GTAGGCTAACTT AAA AAGTTAGCCTACATA AAAAATTAAAGAGGG TERM 390 237937 - 237911 - f 100 -16.8 -3.68911 | overlap 237909 AAGAGAAATGAAATA GTAGGCTAACTT AAA AAGTTAGCCTAC ATAAAAAATTAAAGA CPE0186 237966 - 239483 + | hypothetical protein TERM 391 239511 - 239561 + F 95 -10.9 -3.67417 | gap 1, opp_overlap 239511, overlap 239515 TAATGTTTAATTAGA GTGAGTGTTGATTTTTAGATAGTT TTAA AATTATCTGAAGATCAGCACT-AC TTTAAAATTGAATGT TERM 392 239515 - 239558 + F 93 -12.8 -2.94412 | opp_overlap 239511, overlap 239511 GTTTAATTAGAGTGA GTGTTGATTTTTAGATAGTT TTAA AATTATCTGAAGATCAGCAC TACTTTAAAATTGAA CPE0187 239593 - 240045 + | hypothetical protein CPE0188 240201 - 241088 + | ROK family protein CPE0189 241279 - 242118 + | RpiR family transcriptional regulator TERM 393 242284 - 242321 + T 90 -10.8 -3.39534 | opp_overlap 242289, overlap 242289 TAAAAAATAAGAATA AAAAATAGGTCACAGT AATAAA GCTGTGACCTATTTTA CTTTGTTCTTTTAGA TERM 394 242289 - 242316 + T 100 -10.7 -4.71708 | opp_overlap 242289, overlap 242284 AATAAGAATAAAAAA TAGGTCACAGT AATAAA GCTGTGACCTA TTTTACTTTGTTCTT TERM 395 242316 - 242289 - T 100 -10 -5.70522 | opp_overlap 242284 242289 AATAAGAATAAAAAA TAGGTCACAG TAATAAAG CTGTGACCTA TTTTACTTTGTTCTT CPE0190 242708 - 242319 - | hypothetical protein nagH 242971 - 247857 + | hyaluronidase TERM 396 248291 - 248274 - f 70 -7.1 -3.70571 | opp_overlap 248274 248276 TAGAAATAGGTTAAA TAGTTAC ATTT GTAACTA TATATTAAAAGGGAA TERM 397 248534 - 248512 - f 70 -7.7 -3.34233 | opp_overlap 248512 TTAGAATTTTTATAA CCTCTAGAC GCAAT GTCTAGGGG TTTTTTATTTCTAAG TERM 398 248512 - 248534 + F 100 -10.6 -5.72622 | opp_overlap 248512 TTAGAATTTTTATAA CCTCTAGACG CAA TGTCTAGGGG TTTTTTATTTCTAAG cbiM 248808 - 249479 + | cobalt transport protein CbiM TERM 399 249646 - 249616 - g 70 -8.4 -3.20437 | opp_overlap 249616, overlap 249615 AGCAATAACACAAAT TGATGAAAACTATG AAC CATGGTTCTCACCA TTATTTGAACCAGCT cbiN 249479 - 249790 + | cobalt transport protein CbiN TERM 400 250008 - 250024 + G 77 -8.1 -3.81146 | overlap 249994 TTAATAATTGGTATC CTAACAA TTG TTGTTAG TTATTCATTAAAACA cbiQ 249837 - 250544 + | cobalt ABC transporter permease cbiO 250559 - 251416 + | cobalt transporter ATP-binding subunit TERM 401 251447 - 251476 + F 100 -14.5 -5.27476 | opp_overlap 251436 251447 AAATTAAGCAAGAAA GGCTTATACCAAA TTAA TTTGGTATAGGCC TTTTATTTTATTAAA TERM 402 251476 - 251447 - f 100 -12.3 -4.37247 | opp_overlap 251447, overlap 251436 AAATTAAGCAAGAAA GGCTTATACCAAA TTAA TTTGGTATAGGCC TTTTATTTTATTAAA TERM 403 252825 - 252796 - g 76 -3.5 -5.48028 | opp_overlap 252798, overlap 252798 CAAATAAAAAGAAAA TAGTTGCAGGTTT ATTA ATACCAGCAACTT TAACAGCAATATTAG TERM 404 252823 - 252798 - g 72 -6.1 -4.3115 | opp_overlap 252798, overlap 252796 AATAAAAAGAAAATA GTTGCAGGTTT ATTA ATACCAGCAAC TTTAACAGCAATATT ptiB 251886 - 253466 + | PTS arbutin-like enzyme IIBC component TERM 405 253526 - 253501 - f 77 -9.1 -3.47387 | opp_overlap 253501 TTAAAATACTTAGAA CACTATGGTGA ATTT TAACCATAGTG TTTTTTATAGATATA TERM 406 253501 - 253526 + F 100 -9.1 -5.29782 | opp_overlap 253501 TTAAAATACTTAGAA CACTATGGTGA ATTT TAACCATAGTG TTTTTTATAGATATA CPE0197 253730 - 254500 + | hypothetical protein TERM 407 254655 - 254681 + F 90 -10.3 -3.32986 | opp_overlap 254646 254658 254678, overlap 254652 254658 AAAATATATTTTAAA TAAGGTTGTAC TAATT GTACAACCTTG TAATTTTTATAAGTA TERM 408 254678 - 254658 - f 93 -9.8 -3.9578 | opp_overlap 254655 254652 254658 ATATATTTTAAATAA GGTTGTAC TAATT GTACAACC TTGTAATTTTTATAA TERM 409 254658 - 254678 + F 90 -9.8 -3.78785 | opp_overlap 254658, overlap 254655 254652 ATATATTTTAAATAA GGTTGTAC TAATT GTACAACC TTGTAATTTTTATAA CPE0198 254724 - 255224 + | hypothetical protein malH 255480 - 256805 + | maltose-6'-phosphate glucosidase TERM 410 256840 - 256877 + F 83 -6.5 -5.252 | overlap 256875 ATATAGAGTTTGAAA TAAGAAGATGCTTAATT AAAA AAATAAGTGTCTTCTTG TTTTTTATAAAAATA TERM 411 257191 - 257229 + F 80 -10.1 -2.90392 | gap 1, overlap 257188 GGTCGAATTTTGTAA TTCTAAAATTATTT-ACT AATT AGTTAAATAATTTTAGAA TATAGTTAAAGGATG CPE0200 257386 - 257547 + | hypothetical protein TERM 412 257717 - 257659 - T 87 -10.3 -3.15078 | gap 1, opp_overlap 257644 257661 257663 257676, overlap 257657 257661 257676 TAGATTTTATTAATA TATATTATAA-TAAAAAATCTATATTAC TAAT GTAGTATAGATTTTTTATTTATAATATG TATAATTAAGTAATT TERM 413 257661 - 257715 + T 100 -15.1 -3.0127 | gap 1, opp_overlap 257657 257659 257661 257676, overlap 257644 257663 257676 GATTTTATTAATATA TATTAT-AATAAAAAATCTATATTAC TAAT GTAGTATAGATTTTTTATTTATAATA TGTATAATTAAGTAA TERM 414 257715 - 257661 - T 95 -12.9 -3.13371 | gap 1, opp_overlap 257644 257661 257663 257676, overlap 257657 257659 257676 GATTTTATTAATATA TATTATAA-TAAAAAATCTATATTAC TAAT GTAGTATAGATTTTTTATTTATAATA TGTATAATTAAGTAA TERM 415 257663 - 257713 + T 95 -13.3 -3.05914 | gap 1, opp_overlap 257657 257661 257659 257676, overlap 257644 257661 257676 TTTTATTAATATATA TTAT-AATAAAAAATCTATATTAC TAAT GTAGTATAGATTTTTTATTTATAA TATGTATAATTAAGT TERM 416 257676 - 257699 + T 100 -7.6 -5.73978 | opp_overlap 257661 257659 257676, overlap 257644 257663 257661 TATTATAATAAAAAA TCTATATTAC TAAT GTAGTATAGA TTTTTTATTTATAAT TERM 417 257699 - 257676 - T 82 -5.4 -5.58179 | opp_overlap 257644 257676 257663 257661, overlap 257661 257659 TATTATAATAAAAAA TCTATATTAC TAAT GTAGTATAGA TTTTTTATTTATAAT CPE0201 258627 - 257764 - | 5'-nucleotidase, lipoprotein e(P4) family TERM 418 258824 - 258841 + r 100 -8.5 -5.49234 | opp_overlap 258824 ATGTAAATAAAAAAA GATAGTC AAAT GACTATC TTTTTTATTAGATAT TERM 419 258841 - 258824 - R 100 -8.5 -5.96894 | opp_overlap 258824 ATGTAAATAAAAAAA GATAGTC AAAT GACTATC TTTTTTATTAGATAT spoIIQ 260048 - 258849 - | cell wall-binding protein TERM 420 259840 - 259856 + g 74 -7.3 -3.94188 | TTAACTTTTGCTTGG GCTGAAT TAA GTTCAGC TTGTTTAGCGTCAAT TERM 421 260536 - 260577 + H 100 -11.9 -4.27584 | opp_overlap 260538, overlap 260538 TTAATTTATTTTATA CAGGCATATTAAGATTAAT TTTA AATAATCTTAATATGCCTA TTTTAAATTAGGGAT TERM 422 260575 - 260538 - H 100 -14.5 -2.9006 | opp_overlap 260536 260538 AATTTATTTTATACA GGCATATTAAGATTAAT TTTA AATAATCTTAATATGCC TATTTTAAATTAGGG TERM 423 260538 - 260575 + H 100 -14.5 -3.7398 | opp_overlap 260538, overlap 260536 AATTTATTTTATACA GGCATATTAAGATTAAT TTTA AATAATCTTAATATGCC TATTTTAAATTAGGG CPE0203 260735 - 261391 + | hypothetical protein TERM 424 261870 - 261855 - f 74 -6.1 -4.67697 | TGTTAAAATAAGAAA GTCGC TTGAGG GCGAC AACGAAATGGTCTTT TERM 425 262161 - 262136 - f 72 -9.1 -2.61735 | overlap 262135 262143 TTAATACCGCATAAT GTTGAAAGATG GCAT CATCATTCAAC CAAAGGAGCAATCCG TERM 426 263456 - 263437 - f 75 -9.2 -2.65808 | opp_overlap 263440 263443, overlap 263434 263449 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 427 263502 - 263482 - f 72 -8.4 -3.23853 | overlap 263480 CCTTTCTAAGGAATA CATCTTAG GACAA CTAAGATG ACAATGAATTCTGGA TERM 428 263531 - 263559 + F 100 -12.7 -3.94 | overlap 263534 GATAATATCTCTGTT TAATTTTGAGAGA CTA TCTCTCAAAATTG TTCTTTGAAAATTGC TERM 429 263534 - 263556 + F 100 -12.2 -4.08958 | overlap 263531 AATATCTCTGTTTAA TTTTGAGAGA CTA TCTCTCAAAA TTGTTCTTTGAAAAT TERM 430 263612 - 263602 - f 71 -6.8 -4.18983 | opp_overlap 263608, overlap 263608 TTATAGAAACAACAA GCCA AAT TGGC AAAACCAATTTCTAT TERM 431 263789 - 263804 + F 73 -9 -2.92371 | opp_overlap 263786 263789, overlap 263791 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 432 263804 - 263789 - f 72 -9 -2.69489 | opp_overlap 263789 263791, overlap 263786 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 433 263947 - 263930 - f 90 -9.9 -3.695 | opp_overlap 263929 263928 GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTTGTGGACATAGC TERM 434 264114 - 264099 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 435 264188 - 264177 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 436 264424 - 264414 - f 71 -6.8 -4.15453 | opp_overlap 264417 GAAGCGAGGGTAAAA CCTC GTG GAGG ACCGAACCACGTTGC TERM 437 265008 - 264992 - f 82 -8.7 -4.13014 | CCCACAGGCCGAAAA CCTAAGG TTT CCTCAGG AAGGTTCGTCCGCTG TERM 438 266909 - 266888 - f 100 -11.7 -4.2828 | opp_overlap 266888 CTCGAGCCACCAAAA GCTTAGTGA ATTT TCACTAAGC TTTTTTTATACAATT TERM 439 266888 - 266909 + F 100 -11.7 -5.63504 | opp_overlap 266888 CTCGAGCCACCAAAA GCTTAGTGA ATTT TCACTAAGC TTTTTTTATACAATT TERM 440 266916 - 266945 + F 100 -11.1 -4.28111 | opp_overlap 266923 TCACTAAGCTTTTTT TATACAATTAAAT AGTA ATTTAATTGTATA TTTATTAATACTATA TERM 441 267083 - 267025 - f 100 -14.7 -4.93316 | gap 1, opp_overlap 267031, overlap 267026 267031 GAATAAGATGAAAAA GTAAAAGGAATATTTATAAAATTTATTT ATGT AAATAAATTTTATAAATATTCCTTTTT- TAATTTTAAATCCAC TERM 442 267083 - 267026 - f 100 -20.7 -3.54363 | opp_overlap 267031, overlap 267025 267031 AATAAGATGAAAAAG TAAAAGGAATATTTATAAAATTTATTT ATGT AAATAAATTTTATAAATATTCCTTTTT TAATTTTAAATCCAC TERM 443 267078 - 267031 - f 100 -20.6 -4.80167 | opp_overlap 267031, overlap 267025 267026 GATGAAAAAGTAAAA GGAATATTTATAAAATTTATTT ATGT AAATAAATTTTATAAATATTCC TTTTTTAATTTTAAA TERM 444 267031 - 267078 + F 100 -20.6 -5.46698 | opp_overlap 267031 267025 267026 GATGAAAAAGTAAAA GGAATATTTATAAAATTTATTT ATGT AAATAAATTTTATAAATATTCC TTTTTTAATTTTAAA CPE0204 267399 - 268028 + | acetyltransferase TERM 445 268077 - 268108 + F 100 -8.2 -5.61277 | TTTATATATAAATTA GAAGGTTCATATTA AATA TAGTGTGAATCTTC TTTTATTTTTTTATA CPE0205 268495 - 268770 + | hypothetical protein TERM 446 269232 - 269196 - f 91 -12.8 -2.77235 | opp_overlap 269201 269205, overlap 269198 269201 TTAATCATTTAACTA TATAAGTAATTTTATA GACAA TATAAAATTACTTATA GCTGATGTTTATATT TERM 447 269230 - 269198 - f 85 -11 -2.92936 | opp_overlap 269201 269205, overlap 269196 269201 AATCATTTAACTATA TAAGTAATTTTATA GACAA TATAAAATTACTTA TAGCTGATGTTTATA TERM 448 269227 - 269201 - f 75 -8.3 -3.60661 | opp_overlap 269201 269205, overlap 269198 269196 CATTTAACTATATAA GTAATTTTATA GACAA TATAAAATTAC TTATAGCTGATGTTT TERM 449 269201 - 269227 + F 74 -8.3 -3.39884 | opp_overlap 269201 269198 269196, overlap 269205 CATTTAACTATATAA GTAATTTTATA GACAA TATAAAATTAC TTATAGCTGATGTTT TERM 450 269760 - 269801 + F 100 -12.7 -5.35815 | opp_overlap 269760 269765, overlap 269765 AAGATAAATAATTAA GAGAAGTTATATCAAAGGT ATAT ATTTTTGATATAACTTTTC TTTTTGTTTAATATG TERM 451 269765 - 269796 + F 100 -9 -5.48028 | opp_overlap 269760 269765, overlap 269760 AAATAATTAAGAGAA GTTATATCAAAGGT ATAT ATTTTTGATATAAC TTTTCTTTTTGTTTA TERM 452 269888 - 269902 + F 73 -4.4 -5.24129 | TTTGAATAAATGGGC TAAAAT ACG ATTTTA TTTTTTGTAAGAAAA CPE0206 270353 - 270934 + | hypothetical protein CPE0207 273448 - 271073 - | two-component sensor histidine kinase TERM 453 272101 - 272118 + g 77 -7.1 -4.26202 | TACCTAAAAGGTTTA TTATAGG CATT CCTATAA TTTCTTCATAAGTAT TERM 454 272405 - 272417 + g 74 -3.4 -5.42259 | opp_overlap 272405 GCCCTTATTAAAAAG TGCT TTAGT AGCA TTTTTTTCAGAGTCA CPE0208 273815 - 274873 + | hypothetical protein TERM 455 274904 - 274881 - f 95 -12.6 -3.35961 | opp_overlap 274881 ATAAATAATTATTAA GGCTTAGAAA ATTT TTTCTAAGCC TTTTTTGTAATATTT TERM 456 274881 - 274904 + F 100 -12.6 -5.38321 | opp_overlap 274881 ATAAATAATTATTAA GGCTTAGAAA ATTT TTTCTAAGCC TTTTTTGTAATATTT CPE0209 274974 - 275201 + | hypothetical protein TERM 457 275212 - 275239 + F 90 -6.5 -5.63645 | opp_overlap 275212 ATTAATATTTTAAAA GTTATGAGATA TGTAAT TATTTCATAAC TTTTTTATATTTTAA TERM 458 275761 - 275738 - g 79 -7.6 -4.3587 | opp_overlap 275738 CAGGAATAAGAGAAA TTATGTCATC TATA GATAACATAA ATATTAATATTGAGG CPE0210 275341 - 276222 + | hypothetical protein TERM 459 276363 - 276327 - g 70 -5.1 -4.67353 | opp_overlap 276327 276335 276336, overlap 276336 276337 TGATTTATTGAAAAA TGCTGAAAAGGCATGGG AGA CCCATGCAGCTTTAACA TATATAGCTTTAAGA TERM 460 276354 - 276336 - g 84 -8.8 -4.20883 | opp_overlap 276335 276327 276336, overlap 276327 276337 GAAAAATGCTGAAAA GGCATGGG AGA CCCATGCA GCTTTAACATATATA TERM 461 276353 - 276337 - g 100 -12.3 -3.11445 | opp_overlap 276335 276336 276327, overlap 276336 276327 AAAAATGCTGAAAAG GCATGGG AGA CCCATGC AGCTTTAACATATAT TERM 462 277366 - 277350 - g 74 -6.7 -4.32579 | overlap 277346 AGAGGCTATAATAAA TTACTAT TTA ATAGTAA TAATGAATAGTTTGT TERM 463 277635 - 277649 + G 77 -5.8 -4.94992 | overlap 277632 AATTTATGTAGCCTT TCAAAA AGA TTTTGA TTTTTATGAATTTAG CPE0211 276250 - 278448 + | hypothetical protein TERM 464 278453 - 278472 + F 95 -10.8 -3.89617 | opp_overlap 278453, overlap 278447 TTGCTAAATAAAAAA GCTGGTAT TTTT ATACCAGC TTTAAATTTATAAAT TERM 465 278472 - 278453 - f 100 -10.8 -5.63517 | opp_overlap 278447 278453 TTGCTAAATAAAAAA GCTGGTAT TTTT ATACCAGC TTTAAATTTATAAAT TERM 466 278632 - 278647 + F 84 -4.8 -5.69473 | opp_overlap 278632 TATAACACAAATTTA GTTATA TAAA TATAAC TTTTTTTCTAATATA TERM 467 279440 - 279420 - g 76 -7.7 -3.88601 | opp_overlap 279419 TAAAACCTATAAGAA CCTCAAAAA GAT TTTTTGAAG ATACTTGCTTAATAT TERM 468 279500 - 279490 - g 72 -2.6 -5.42975 | TTATATAAATAAAAA TATA TAT TATA AATTTGTTGAAATGC CPE0212 278930 - 279700 + | hypothetical protein TERM 469 279751 - 279716 - T 73 -6.4 -4.2651 | overlap 279717 AAATATTTAAAATAA TTTTTGTCAATATTTT GAAA AAGATATTGACAAAAG CGCTTGAAAACGTTA TERM 470 279750 - 279717 - T 85 -9.9 -3.14279 | overlap 279716 AATATTTAAAATAAT TTTTGTCAATATTTT GAAA AAGATATTGACAAAA GCGCTTGAAAACGTT TERM 471 279857 - 279818 - T 82 -8.2 -4.43844 | opp_overlap 279818 GTAGGATTGATAAAA GCCTAAATTAAATG TGTTTATTTGTT CATTTAATTTAGGC TTTTTATTGTTTTAT TERM 472 279818 - 279857 + T 100 -8.2 -5.47964 | opp_overlap 279818 GTAGGATTGATAAAA GCCTAAATTAAATG TGTTTATTTGTT CATTTAATTTAGGC TTTTTATTGTTTTAT CPE0213 280694 - 279879 - | hypothetical protein TERM 473 280527 - 280539 + g 72 -6.3 -4.2331 | TGCAAATGATGTTAA TGTAG GAT CTACA TTTCTACTTTTCATT TERM 474 280960 - 280937 - R 78 -6.8 -4.87273 | AAGACCTTATAAAAA CCATAGTTTT GGGC AGAACTATGG GGTGGCATTACTAGG TERM 475 280977 - 281005 + r 89 -8.9 -4.62051 | opp_overlap 280980, overlap 280978 280980 GTGGCATTACTAGGG AAAGAGCTATGGA GTA TCCATAGCTCTAA TTTTATATAATATTT TERM 476 280978 - 281004 + r 95 -12.4 -3.35604 | opp_overlap 280980, overlap 280977 280980 TGGCATTACTAGGGA AAGAGCTATGGA GTA TCCATAGCTCTA ATTTTATATAATATT TERM 477 281002 - 280980 - R 100 -15 -3.69323 | opp_overlap 280980 280978 280977 GCATTACTAGGGAAA GAGCTATGGA GTA TCCATAGCTC TAATTTTATATAATA TERM 478 280980 - 281002 + r 100 -15 -3.23165 | opp_overlap 280980, overlap 280978 280977 GCATTACTAGGGAAA GAGCTATGGA GTA TCCATAGCTC TAATTTTATATAATA CPE0214 281912 - 281268 - | heme oxygenase sbcD 282313 - 283536 + | exonuclease TERM 479 284352 - 284342 - g 70 -4 -4.9448 | AGTGAGGAAATAAAA TCTT TTA AAGA AAGGGTTGAAATTTC TERM 480 285088 - 285076 - g 85 -4.9 -5.51046 | opp_overlap 285076 TAAAGAGATAAAAAA TTCTT TAG AAGAA TCCTTAAAGACTAAA sbcC 283514 - 287041 + | exonuclease SbcC TERM 481 287044 - 287084 + F 100 -14.4 -3.3579 | opp_overlap 287044 287049 287055, overlap 287049 287055 AGAGAGAAGTTAAAT TAAAATCAAAAGAGCTTA ATAAA TAAGCTCTTTTGATTTAA TATTTAAAAAGATTT TERM 482 287084 - 287044 - f 100 -14.4 -2.89913 | opp_overlap 287044 287049 287055, overlap 287049 287055 AGAGAGAAGTTAAAT TAAAATCAAAAGAGCTTA ATAAA TAAGCTCTTTTGATTTAA TATTTAAAAAGATTT TERM 483 287079 - 287049 - f 100 -14.3 -4.5852 | opp_overlap 287044 287049 287055, overlap 287044 287055 GAAGTTAAATTAAAA TCAAAAGAGCTTA ATAAA TAAGCTCTTTTGA TTTAATATTTAAAAA TERM 484 287049 - 287079 + F 100 -14.3 -4.00532 | opp_overlap 287049 287044 287055, overlap 287044 287055 GAAGTTAAATTAAAA TCAAAAGAGCTTA ATAAA TAAGCTCTTTTGA TTTAATATTTAAAAA TERM 485 287055 - 287073 + F 83 -7.5 -4.61284 | opp_overlap 287049 287044 287055, overlap 287049 287044 AAATTAAAATCAAAA GAGCTTA ATAAA TAAGCTC TTTTGATTTAATATT TERM 486 287073 - 287055 - f 86 -7.5 -4.74084 | opp_overlap 287055 287049 287044, overlap 287049 287044 AAATTAAAATCAAAA GAGCTTA ATAAA TAAGCTC TTTTGATTTAATATT TERM 487 287878 - 287894 + G 74 -9.5 -2.83899 | opp_overlap 287893, overlap 287877 AATAAAGAAATGGTA GCTGTAT TTG ATACAGC CTTTCATGGAACATT ackA 287446 - 288642 + | acetate kinase TERM 488 288741 - 288786 + F 100 -8.6 -5.626 | opp_overlap 288740 288741 ATAATAAATAAAAGT TGAGAATGTATGGATTTTAT GTGAAA ATAAATTTCTTACATTCTCA TTTTTTTATAACATA TERM 489 289561 - 289576 + G 74 -6.2 -4.4891 | ACTTATACTTAGATG TGCTAT GATT ATAGCA TTTTGTGATGATGGA CPE0218 289079 - 289900 + | DnaJ-related protein TERM 490 290013 - 289984 - T 100 -13.9 -2.91274 | opp_overlap 289984, overlap 289986 GTTATTTTAATTAGA TATTACTGGAAAT AATG ATTTCCAGTAATA TTTTTTTTAGAATTA TERM 491 289984 - 290013 + T 100 -13.9 -5.81032 | opp_overlap 289984 289986 GTTATTTTAATTAGA TATTACTGGAAAT AATG ATTTCCAGTAATA TTTTTTTTAGAATTA TERM 492 290011 - 289986 - T 90 -12.1 -3.00774 | opp_overlap 289984, overlap 289984 TATTTTAATTAGATA TTACTGGAAAT AATG ATTTCCAGTAA TATTTTTTTTAGAAT CPE0219 290909 - 290151 - | AraC family transcriptional regulator CPE0220 291056 - 293287 + | hypothetical protein TERM 493 293325 - 293294 - f 72 -8.8 -2.5031 | opp_overlap 293296, overlap 293293 293291 GAAGAGTAAAAGCAG TTTAGTTTGAGAGG ATTT CCTCTCAAACTATT TTTAAACAAATGGAG TERM 494 293296 - 293323 + F 100 -15.8 -4.57569 | opp_overlap 293294 293293 293291 AGAGTAAAAGCAGTT TAGTTTGAGAGG ATTT CCTCTCAAACTA TTTTTAAACAAATGG CPE0221 293350 - 293997 + | putative iron transporter CPE0222 293999 - 294562 + | sortase family protein CPE0223 294576 - 295463 + | ferrichrome ABC transporter TERM 495 295991 - 296009 + G 73 -8.8 -3.16683 | opp_overlap 295991 TACAATCTTGGATAA GTGGAAGC TTA GCTGCCAC TTCATGGGATGAAGT TERM 496 296009 - 295991 - g 74 -8.8 -3.31799 | opp_overlap 295991 TACAATCTTGGATAA GTGGAAGC TTA GCTGCCAC TTCATGGGATGAAGT CPE0224 295450 - 296436 + | ferrichrome ABC transporter fhuC 296437 - 297216 + | ferrichrome ABC transporter TERM 497 297968 - 298003 + G 75 -7.2 -4.08216 | gap 1, opp_overlap 297967 297978 GAAAGTTTTAAGTAT GCAATTAAACTCAATAA ATG TTATGGA-TTTAATTGC TTTTGGAGGAGCTGC CPE0226 297255 - 298985 + | ABC transporter TERM 498 299684 - 299673 - g 83 -3 -5.80817 | opp_overlap 299673 GGGAATATAAAAAAA TTCT CTGA AGAA TTAAATGAGAAGCAA CPE0227 298986 - 300674 + | ABC transporter CPE0228 300661 - 301056 + | hypothetical protein CPE0229 301037 - 301336 + | hypothetical protein TERM 499 301351 - 301392 + F 100 -9.7 -5.4433 | GTTTTGCAAAAAAAG GATGTATCTAAATAGGGAA AATA TTTCTTGTTTGGATGCATC TTTTTATTTATATAT CPE0230 301463 - 301648 + | iron-sulfur cluster-binding protein CPE0231 301943 - 303388 + | arylsulfatase TERM 500 303496 - 303465 - T 100 -10.3 -5.55769 | opp_overlap 303465 TTCTATAATAAAAAA GGAAACTAGAAAG GGGGAG CCTCCTAGTTTCC TTTATCTGATTTATA TERM 501 303465 - 303496 + T 71 -6.7 -4.19123 | gap 1, opp_overlap 303465 TTCTATAATAAAAAA GGAAACTAGAAAGG GGGAG CCTC-CTAGTTTCC TTTATCTGATTTATA glpT 304883 - 303546 - | glycerol-3-phosphate transporter TERM 502 305017 - 304972 - R 100 -15.9 -4.1648 | opp_overlap 304972 304977, overlap 304977 ATAAGAATTAAACAA CAAAATCTCTTAAATGTTTCA TAAA TGTAACATTTAAGAGATTTTA ATTAATTTTAATCCT TERM 503 304972 - 305017 + r 100 -13.7 -2.82923 | opp_overlap 304972 304977, overlap 304977 ATAAGAATTAAACAA CAAAATCTCTTAAATGTTTCA TAAA TGTAACATTTAAGAGATTTTA ATTAATTTTAATCCT TERM 504 304977 - 305012 + r 100 -13.6 -4.5528 | opp_overlap 304972 304977, overlap 304972 AATTAAACAACAAAA TCTCTTAAATGTTTCA TAAA TGTAACATTTAAGAGA TTTTAATTAATTTTA TERM 505 305012 - 304977 - R 100 -13.6 -5.03961 | opp_overlap 304977 304972, overlap 304972 AATTAAACAACAAAA TCTCTTAAATGTTTCA TAAA TGTAACATTTAAGAGA TTTTAATTAATTTTA CPE0233 306103 - 305084 - | iron(III) ABC transporter CPE0234 306872 - 306084 - | hypothetical protein CPE0235 308295 - 306865 - | sensor histidine kinase TERM 506 307872 - 307886 + g 76 -3.6 -5.35459 | TAGAAAGGAAGAGAG TAGGTA TGT TATCTA TTTTTTCTACTATGT CPE0236 308956 - 308285 - | DNA-binding response regulator TERM 507 308311 - 308322 + g 72 -4.4 -5.07941 | overlap 308313 CTAATTTATAACCAG CCTT ATAT AAGG TTTTTATGTAATTTT TERM 508 309538 - 309553 + G 82 -5.4 -5.45652 | opp_overlap 309538, overlap 309522 309520 ACTTGGAGTAATAAT TCCTCT TGTA GGAGGA TTTTTTATTGCAAGT napA 309248 - 310447 + | Na+/H+ antiporter TERM 509 310589 - 310635 + F 75 -9.1 -3.12351 | opp_overlap 310589 310587, overlap 310621 310627 CCTTTAAAAGAAACA GTCTTAGTATTATTATAATTA ATAAA TAATTATATAAATACTAAGGC TTGAGTGTAGAGAAA TERM 510 310932 - 310922 - g 76 -2.6 -5.62219 | AATATATTAAAAAAA TTAT TAA ATAA CTTAAAAGGTGAAAA CPE0238 310700 - 311227 + | hypothetical protein TERM 511 311324 - 311352 + F 86 -11.9 -2.70932 | opp_overlap 311329, overlap 311329 TTATAATAAAAATAA AAAAAGGTTCTGT TTT ACAGAACCTTTTG TGGTTGCGGGAGCAG TERM 512 311347 - 311329 - f 100 -11.8 -6.23317 | opp_overlap 311329 311324 ATAAAAATAAAAAAA GGTTCTGT TTT ACAGAACC TTTTGTGGTTGCGGG TERM 513 311329 - 311347 + F 100 -11.8 -4.5442 | opp_overlap 311329, overlap 311324 ATAAAAATAAAAAAA GGTTCTGT TTT ACAGAACC TTTTGTGGTTGCGGG CPE0239 311601 - 312377 + | hypothetical protein TERM 514 312584 - 312607 + F 85 -8.2 -4.65458 | ATTTATTTTGGATTT GGTTGGAGAA TAAT TTCTTCAGCC TTTATTCTTTATATA TERM 515 312657 - 312695 + F 86 -4.2 -5.95449 | gap 2, opp_overlap 312668 AATATTTAAAATTAA GTCTTATGAA-A-TCAAG GGTAA CTTGAGTATTCATAAGGC TTTTTTATTTTATTT CPE0240 312795 - 314225 + | hypothetical protein CPE0241 314228 - 314920 + | hypothetical protein TERM 516 314941 - 314963 + T 100 -9.3 -5.38951 | opp_overlap 314941 AAAAGAGGGCAAAAA CATCATAAC TTATT GTTATGATG TTTTTTATATACATT TERM 517 314963 - 314941 - T 93 -9.3 -4.69464 | opp_overlap 314941 AAAAGAGGGCAAAAA CATCATAAC TTATT GTTATGATG TTTTTTATATACATT CPE0242 315338 - 315018 - | immunity protein CPE0243 315473 - 315721 + | hypothetical protein CPE0244 315728 - 316504 + | hypothetical protein TERM 518 316507 - 316490 - T 75 -5.7 -4.98616 | GGAAAATATGAAAAA TCTTTAT ATAA ATAAAGA AAAAGGGGGGATATC CPE0245 318922 - 316595 - | GGDEF/EAL domain protein CPE0246 319177 - 320445 + | dnaJ domain protein grpE 320463 - 321065 + | GrpE protein dnaK 321053 - 322780 + | dnaK family protein CPE0249 322798 - 323532 + | hypothetical protein TERM 519 323540 - 323598 + F 100 -15.3 -5.13354 | gap 1, opp_overlap 323542 323553 GTTTATAAATTAATT TAGCTGTATTAAA-TATATTCTAAAAAA TAAA TTTCTTAGAATATATTTTGATACAGCTA TTTGTTTTTTATGAA TERM 520 323596 - 323542 - f 91 -13.5 -2.64878 | gap 1, opp_overlap 323540, overlap 323553 TTATAAATTAATTTA GCTGTATTAAA-TATATTCTAAAAAA TAAA TTTCTTAGAATATATTTTGATACAGC TATTTGTTTTTTATG TERM 521 323584 - 323553 - f 90 -9.8 -3.73775 | opp_overlap 323540, overlap 323542 TTTAGCTGTATTAAA TATATTCTAAAAAA TAAA TTTCTTAGAATATA TTTTGATACAGCTAT CPE0250 323804 - 324577 + | capsular polysaccharide biosynthesis protein TERM 522 324606 - 324644 + F 82 -5.6 -5.45802 | opp_overlap 324606 324619 AGCTATTAAATATAG GTCTATATCAAGAT AATTTTATTAA ATTTTGATATAGAC TTTTTCTTTTAAAGA TERM 523 325508 - 325529 + G 76 -6.7 -4.41616 | opp_overlap 325511 CATTTAGTTCAGATG TAAGTTATC CATG GGTAACTTA TTTGTTTAAAGGAAT CPE0251 324892 - 326214 + | hypothetical protein TERM 524 326233 - 326263 + T 100 -15.6 -4.35524 | opp_overlap 326226 AAAATTTATTTTTAA CCCCCATTTCATTT TTA GAATGAAGTGGGGG TTTTAAGTTTAAAAA CPE0252 326733 - 326287 - | hypothetical protein CPE0253 326853 - 327056 + | hypothetical protein TERM 525 327255 - 327243 - g 86 -6.3 -5.46706 | ATTGCAAAAGAAAAA GGATA CTA TATCC CTGCTCAACAAGCAA CPE0254 327069 - 327317 + | hypothetical protein TERM 526 327402 - 327361 - T 72 -6.1 -4.42464 | opp_overlap 327369 327398, overlap 327369 AATTTGTTAAATAAA CTTAGAAAGAGACTATTAA AAAA TTAATAGTCTCTTTTTTAT TAAGCAAATAAATTT TERM 527 327394 - 327369 - T 100 -12.1 -4.0683 | opp_overlap 327369, overlap 327361 AAATAAACTTAGAAA GAGACTATTAA AAAA TTAATAGTCTC TTTTTTATTAAGCAA TERM 528 327369 - 327394 + T 100 -12.1 -5.4505 | opp_overlap 327369 327361 AAATAAACTTAGAAA GAGACTATTAA AAAA TTAATAGTCTC TTTTTTATTAAGCAA CPE0255 327716 - 327402 - | hypothetical protein CPE0256 328587 - 327853 - | NAD-dependent deacetylase TERM 529 328673 - 328712 + H 72 -7.5 -3.53012 | opp_overlap 328673, overlap 328666 AAAAGTTGTTGACAA GTTTTGTTGTCAATT GGTAAAATAA AATTGACAATAAAAC TTTGCAAAACAACAA CPE0257 328757 - 329080 + | hypothetical protein CPE0258 329114 - 329323 + | transcriptional regulator TERM 530 329352 - 329324 - f 87 -10.5 -3.15544 | opp_overlap 329324, overlap 329328 TTTTATTTTGATTAA TTAAGAGTGATTA GAC TTATCACTCTTAA TTTTTATATTTATAA TERM 531 329324 - 329352 + F 100 -10.5 -5.24799 | opp_overlap 329324 329328 TTTTATTTTGATTAA TTAAGAGTGATTA GAC TTATCACTCTTAA TTTTTATATTTATAA TERM 532 329556 - 329592 + F 95 -5.4 -6.09196 | opp_overlap 329548, overlap 329548 AGAAGTATACAGCGT GTAGTTTTAATGAC GTAATTCCA GTTGTTAAAACTAC TTTTTTTATTTTAGA CPE0259 329698 - 330204 + | CarD family transcriptional regulator TERM 533 330982 - 331001 + G 76 -5 -5.06016 | CATAAAAATGATGGT GGTAATAC TATT GTATTTCC TTTTGTTTCTATAAT CPE0260 330592 - 331728 + | mechanosensitive ion channel family protein TERM 534 332058 - 332041 - g 71 -7.1 -3.81951 | opp_overlap 332044, overlap 332044 CTTTAGATTATGAAA CAACAAA GGAA TTTGTTG AGTTAGCTAAACCTT CPE0261 331725 - 332348 + | copper homeostasis protein TERM 535 332569 - 332589 + F 76 -8.5 -3.80877 | opp_overlap 332568 332573, overlap 332566 GTCATATGATATTAG GATATTATT TAA AATAATATC TATTTTCTAACATAA CPE0262 332724 - 332924 + | hypothetical protein TERM 536 333037 - 333056 + T 100 -10.8 -5.84381 | opp_overlap 333037 AATGTAAAGAAAAAA GAAGCAGA TTAA TCTGCTTC TTTTTTTATTCCTAA TERM 537 333056 - 333037 - T 100 -10.8 -5.67283 | opp_overlap 333037 AATGTAAAGAAAAAA GAAGCAGA TTAA TCTGCTTC TTTTTTTATTCCTAA CPE0263 334364 - 333045 - | hypothetical protein TERM 538 333465 - 333446 - G 70 -3.6 -5.09895 | gap 1, opp_overlap 333448, overlap 333448 CAGCCATGGAAAAAA TAGCTCCAA TAG TTGG-GCCA TTTAAATCACCATTT TERM 539 334512 - 334500 - R 72 -4.9 -5.00234 | opp_overlap 334504 334510 TAAAAAAGAAACAAA TAAAG CCA CTTTA GTATAATATTAATTT CPE0264 334873 - 334577 - | hypothetical protein TERM 540 334877 - 334934 + r 95 -13.3 -2.94329 | gap 2, opp_overlap 334878, overlap 334877 ATAATTTTTCATAAA ATTACACCCCTAACTTAATTAATACTC CTAATA GAGTA-TA-TTAAGTTAGGGGTGTAAA GTTTCCTTAAAAATC TERM 541 334877 - 334935 + r 71 -7.3 -3.91084 | gap 3, opp_overlap 334878, overlap 334877 ATAATTTTTCATAAA -ATTACACCCCTAACTTAATTAATACTC CTAATA GAGTA-TA-TTAAGTTAGGGGTGTAAAG TTTCCTTAAAAATCA TERM 542 334933 - 334878 - R 100 -17.5 -4.386 | gap 2, opp_overlap 334877 334877 TAATTTTTCATAAAA TTACACCCCTAACTTAATTAATACTCC TAAT AGAGTAT-A-TTAAGTTAGGGGTGTAA AGTTTCCTTAAAAAT CPE0265 335758 - 335081 - | uracil-DNA glycosylase CPE0266 336095 - 338632 + | beta-hexosamidase A TERM 543 338657 - 338689 + T 95 -10.1 -4.29325 | opp_overlap 338651 338662, overlap 338662 CAATATAAATTTTTT TAAAAGGAATGCTTT TTT ACAGTATTCCTTTTA TTTTACATATTAATA TERM 544 338662 - 338684 + T 78 -5.6 -5.11836 | opp_overlap 338662, overlap 338657 TAAATTTTTTTAAAA GGAATGCTTT TTT ACAGTATTCC TTTTATTTTACATAT TERM 545 338961 - 338946 - T 72 -6.1 -4.39696 | TGCTAAACTAAGAAA GTCGC TTGAGG GCGAC GACGAAATGGTCTTT TERM 546 340547 - 340528 - T 75 -9.2 -2.65808 | opp_overlap 340531 340534, overlap 340525 340540 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 547 340593 - 340573 - T 72 -8.4 -3.23853 | overlap 340571 CCTTTCTAAGGAATA CATCTTAG GACAA CTAAGATG ATAATGAATTCTGGA TERM 548 340935 - 340925 - T 73 -6.8 -4.19887 | opp_overlap 340931, overlap 340931 ATATAGAAACAACAA GCCA AAT TGGC AAAACCAATTTCTAT TERM 549 341112 - 341127 + T 73 -9 -2.92371 | opp_overlap 341109 341112, overlap 341114 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 550 341127 - 341112 - T 72 -9 -2.69489 | opp_overlap 341112 341114, overlap 341109 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 551 341270 - 341253 - T 90 -9.9 -3.695 | GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTTGAGGACATAAC TERM 552 341436 - 341421 - T 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 553 341510 - 341499 - T 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 554 341746 - 341736 - T 71 -6.8 -4.15453 | opp_overlap 341739 GAAGCGAGGGTAAAA CCTC GTG GAGG ACCGAACCACGTTGC TERM 555 342331 - 342315 - T 82 -8.7 -4.13014 | CCCACAGGCCGAAAA CCTAAGG TTT CCTCAGG AAGGTTCGTCCGCTG TERM 556 344211 - 344233 + T 100 -13.6 -5.64274 | opp_overlap 344211 CTCGAGCCACCAAAA GCTTAGTGAA TTA TTCACTAAGC TTTTTTTGTACATAA TERM 557 344233 - 344211 - T 100 -13.6 -4.2828 | opp_overlap 344211 CTCGAGCCACCAAAA GCTTAGTGAA TTA TTCACTAAGC TTTTTTTGTACATAA TERM 558 344405 - 344378 - T 82 -2.3 -6.22691 | gap 1, opp_overlap 344378 344382, overlap 344382 TAAGAATAAAAAAAA TATA-TTTGTTT TTATT AAACAAAATATA TATTTTAAGGGTAGA TERM 559 344513 - 344537 + T 78 -6 -4.98522 | opp_overlap 344529 ACATACATAGAAGGC TATTTTTTAT AGAGC ATAAAAAATA TTTTTATATGAGATT TERM 560 344625 - 344667 + T 100 -18.2 -5.48163 | opp_overlap 344630 344636 CTTTGAACTTATGTT GAAAATTAAAAGAGGATCTT AAT AAGATCCTCTTTTAATTTTA TTTTTTAATTTATTT TERM 561 344662 - 344630 - T 100 -18.1 -4.1196 | opp_overlap 344625, overlap 344636 AACTTATGTTGAAAA TTAAAAGAGGATCTT AAT AAGATCCTCTTTTAA TTTTATTTTTTAATT TERM 562 344656 - 344636 - T 100 -12.7 -4.67038 | opp_overlap 344625, overlap 344630 TGTTGAAAATTAAAA GAGGATCTT AAT AAGATCCTC TTTTAATTTTATTTT CPE0267 345139 - 344672 - | bacterioferritin comigratory protein TERM 563 345331 - 345380 + H 75 -8.3 -3.64371 | opp_overlap 345326 345346, overlap 345326 345332 345336 345346 GAATTATAACTTTTT ATTAGTTGATAAAAACTTTAGAA TATA TTCTAAAGTTTTTAATAATTAAA TTTAAAGTGTGAATT TERM 564 345332 - 345379 + H 88 -11.8 -2.7814 | opp_overlap 345326 345346, overlap 345326 345331 345336 345346 AATTATAACTTTTTA TTAGTTGATAAAAACTTTAGAA TATA TTCTAAAGTTTTTAATAATTAA ATTTAAAGTGTGAAT TERM 565 345336 - 345375 + H 87 -10.4 -3.28765 | opp_overlap 345326 345346, overlap 345326 345332 345331 345346 ATAACTTTTTATTAG TTGATAAAAACTTTAGAA TATA TTCTAAAGTTTTTAATAA TTAAATTTAAAGTGT TERM 566 345346 - 345365 + H 86 -8 -4.81083 | opp_overlap 345346, overlap 345336 345332 345331 ATTAGTTGATAAAAA CTTTAGAA TATA TTCTAAAG TTTTTAATAATTAAA TERM 567 345365 - 345346 - H 86 -8 -4.86001 | opp_overlap 345336 345332 345331 345346 ATTAGTTGATAAAAA CTTTAGAA TATA TTCTAAAG TTTTTAATAATTAAA TERM 568 345881 - 345869 - g 72 -7.7 -3.65522 | TACCCAGCTCAACAA CAAGC TAT GCTTG CTAGTGATGAAGGTA TERM 569 346074 - 346039 - g 77 -5.6 -4.87893 | gap 1, opp_overlap 346032, overlap 346041 346073 AATGGTAATGAAAAA GACTTTATCATCAGTTA CTG TAACAGATGATGAAG-C AAAAGCTTTTTACGA TERM 570 346073 - 346041 - g 88 -9.3 -4.05402 | opp_overlap 346032, overlap 346039 TGGTAATGAAAAAGA CTTTATCATCAGTTA CTG TAACAGATGATGAAG CAAAAGCTTTTTACG CPE0268 345779 - 346525 + | hypothetical protein TERM 571 346575 - 346545 - f 81 -7 -4.74132 | opp_overlap 346545 AGACTCTATTAAAAA GTTAGGTGTAGAAT TTT ATTCTATATCTAAC TTTTTTATTGTTTTT TERM 572 346545 - 346575 + F 100 -11.4 -5.80727 | opp_overlap 346545 AGACTCTATTAAAAA GTTAGGTGTAGAAT TTT ATTCTATATCTAAC TTTTTTATTGTTTTT CPE0269 346988 - 347800 + | ABC transporter TERM 573 347972 - 348013 + G 77 -7.5 -4.20696 | gap 1 TAAGCAAGGGAGAAT GTGTTGGTATTATCGGTC ATAATGG GGCCGGTAA-ATCAACAC TTTTAAAATTACTAA TERM 574 348727 - 348713 - g 80 -6.4 -4.8667 | TAGAGTTTAGAAAAA CTGACT ATG AGCCAG GTACAACTAGAGGAA CPE0270 347818 - 348990 + | ABC transporter CPE0271 349004 - 350287 + | hypothetical protein TERM 575 351399 - 351371 - g 82 -7.6 -4.41548 | overlap 351373 CCAGAGTGTAGAAAA TATGAATCACCT TTAGT AAGTGATTCACA TGAAGATTTCATAAA TERM 576 351397 - 351373 - g 74 -8 -3.81279 | overlap 351371 AGAGTGTAGAAAATA TGAATCACCT TTAGT AAGTGATTCA CATGAAGATTTCATA CPE0272 350306 - 351541 + | hypothetical protein TERM 577 351582 - 351600 + G 72 -6.8 -4.05714 | opp_overlap 351582 ATAGAAGTAAAAAAT CTTTGTAA AAA TTACAGAG TTTATGATTCAAAAT CPE0273 351555 - 352736 + | ABC transporter TERM 578 352780 - 352741 - f 76 -4.5 -5.38047 | gap 1, opp_overlap 352743, overlap 352743 CATGGACATAAAAAA TAGAGGATATGA-CCATA GTTTA TATGGCTTATATCCTCTT TTGTGTACTAATTAT TERM 579 352778 - 352743 - f 75 -7.1 -4.31943 | gap 1, opp_overlap 352743, overlap 352741 TGGACATAAAAAATA GAGGATATGA-CCATA GTTTA TATGGCTTATATCCTC TTTTGTGTACTAATT TERM 580 352743 - 352778 + F 93 -9.3 -4.59027 | gap 1, opp_overlap 352743 352741 TGGACATAAAAAATA GAGGATATGA-CCATA GTTTA TATGGCTTATATCCTC TTTTGTGTACTAATT TERM 581 354074 - 354058 - g 74 -9.5 -2.81187 | AAATATTTGAGTATA TGGCTTT AGA AAAGCCA ATAGTAACAACTGAT CPE0274 352851 - 354284 + | hypothetical protein TERM 582 354304 - 354337 + T 100 -11.3 -5.34365 | opp_overlap 354304 GATTTTACAAAAAAA CTCAATTTAAAACAT TACT AAGTTTTAAATTGAG TTTTTATTATTATAA TERM 583 354337 - 354304 - T 100 -11.3 -5.626 | opp_overlap 354304 GATTTTACAAAAAAA CTCAATTTAAAACAT TACT AAGTTTTAAATTGAG TTTTTATTATTATAA CPE0275 355073 - 354420 - | haloacid dehalogenase, IA family protein CPE0276 356505 - 355156 - | hydrogenase TERM 584 356909 - 356868 - H 100 -17.7 -5.14163 | opp_overlap 356871 ATCTACTAATAAAAA TAATACTCCAGTTAAGTCT AAAT AGATTTAACTGGAGTATTA ATATTAAAATCTTAT TERM 585 356871 - 356906 + H 100 -17.2 -3.37513 | opp_overlap 356868 TACTAATAAAAATAA TACTCCAGTTAAGTCT AAAT AGATTTAACTGGAGTA TTAATATTAAAATCT TERM 586 356957 - 356938 - H 100 -10.8 -5.8901 | opp_overlap 356938 ATATAAAATAAAAAA GGAATTGC TTTT GCAATTCC TTTTGGTCGGGGTGA TERM 587 356938 - 356957 + H 95 -10.8 -4.26076 | opp_overlap 356938 ATATAAAATAAAAAA GGAATTGC TTTT GCAATTCC TTTTGGTCGGGGTGA TERM 588 357226 - 357236 + G 86 -5.4 -5.52023 | AGTTCAATTGTTATG CTAG CAG CTAG TTTTTTATTAATAGT CPE0277 357202 - 357492 + | hypothetical protein CPE0278 357677 - 358975 + | hypothetical protein TERM 589 358989 - 359021 + F 100 -11.6 -5.60993 | gap 1, opp_overlap 358988 358987 AATTTAAAATATATT TATGCCAAACAG-TA GAAA TAGCTGTTTGGCATA TTTTTTTATAAAAGG TERM 590 359341 - 359351 + G 74 -5.4 -5.00196 | TTGTGCACAGGTACA GGAA TAA TTCC TTTTATTATTTACGG CPE0279 359149 - 359919 + | hypothetical protein TERM 591 360542 - 360532 - g 70 -4 -4.91873 | overlap 360526 360534 360536 TAGAGGAAGCAAAAA TTCA TTT TGAA GAAAATGCTCCAAAA CPE0280 359922 - 360764 + | tetrapyrrole methylase family protein TERM 592 360994 - 360961 - T 100 -14.2 -5.4433 | opp_overlap 360965 360989 360990, overlap 360988 ATAGATAAATAAAAA TAAAGCACTTCATA GGGGAT TATGAAGTGCTTTA ACACTATAAGGGGAT TERM 593 360965 - 360990 + T 95 -11.3 -3.59262 | opp_overlap 360961 360988, overlap 360989 ATAAATAAAAATAAA GCACTTCATAG GGGA TTATGAAGTGC TTTAACACTATAAGG CPE0281 361319 - 361080 - | AbrB family transcriptional regulator TERM 594 361846 - 361795 - H 75 -8.6 -3.5335 | opp_overlap 361795 361798 361799 361804 361841, overlap 361799 361804 AAAAAAATACATTAA TAAATAAAATATATTTAAAGTTTT TCAA AAAAATTTGAATATATTTTACTTA TATAGTATTAAATAT TERM 595 361799 - 361842 + H 75 -9.4 -2.75727 | opp_overlap 361795 361799 361804, overlap 361798 361795 361804 361841 AAATACATTAATAAA TAAAATATATTTAAAGTTTT TCAA AAAAATTTGAATATATTTTA CTTATATAGTATTAA TERM 596 361842 - 361799 - H 75 -7.2 -4.33803 | opp_overlap 361799 361798 361795 361804 361841, overlap 361795 361804 AAATACATTAATAAA TAAAATATATTTAAAGTTTT TCAA AAAAATTTGAATATATTTTA CTTATATAGTATTAA CPE0282 362011 - 362610 + | hypothetical protein TERM 597 362634 - 362615 - T 100 -6.5 -6.01725 | opp_overlap 362615 AAGAAAAATAAAAAA GTTGAAG ATAAAG CTTCAAC TTTTTTATTTTTTAT TERM 598 362615 - 362634 + T 100 -6.5 -6.07374 | opp_overlap 362615 AAGAAAAATAAAAAA GTTGAAG ATAAAG CTTCAAC TTTTTTATTTTTTAT CPE0283 363521 - 362646 - | hypothetical protein TERM 599 363620 - 363587 - R 100 -12.7 -5.21709 | opp_overlap 363587 363584 CTCTATAGTAAAAAA GCTGAAAAACAATCT TTTA AGATTATTTTCCAGC TAGTTAATATATTAT CPE0284 364654 - 363632 - | transcriptional regulator TERM 600 364742 - 364782 + H 87 -10.9 -3.06762 | opp_overlap 364721 364748 364755 364757, overlap 364721 364744 364748 364749 AAAAAGTTACATTTT TATTAATTATACATATTAA TTA TAAATGTGTATAATTAATA TATCTATAGTTAATT TERM 601 364744 - 364780 + H 74 -9.1 -3.08278 | opp_overlap 364721 364748 364755 364757, overlap 364721 364742 364748 364749 AAAGTTACATTTTTA TTAATTATACATATTAA TTA TAAATGTGTATAATTAA TATATCTATAGTTAA TERM 602 364865 - 364848 - g 71 -4.9 -4.78512 | overlap 364842 AAAAAGAAATCAAAA GGTTTTC TGAG AAAAACC GTAATATTTCTTGTT TERM 603 365398 - 365408 + G 81 -2.6 -5.69068 | TAGTAGTTATTTTAA TAAT GAT ATTA TTTTTTATGTTTTTA CPE0285 364830 - 365681 + | YihY family protein galE 366728 - 365742 - | UDP-glucose 4-epimerase TERM 604 365872 - 365885 + g 72 -8.1 -3.21924 | opp_overlap 365860 365870 365868 365872, overlap 365870 GAAGCTATTAATATA GCTGG GTCT CCAGC TCTTCTAGGAGCTAC TERM 605 365885 - 365872 - G 70 -8.1 -3.14581 | opp_overlap 365872 365870, overlap 365860 365870 365868 GAAGCTATTAATATA GCTGG GTCT CCAGC TCTTCTAGGAGCTAC CPE0287 366883 - 367227 + | phage-related single-strand DNA binding protein TERM 606 367263 - 367238 - T 100 -9.9 -5.80817 | opp_overlap 367238 TTTAATATAAAAAAA GTAGTAAGCAA ATAT TTACTTACTAC TTTTTGGTTAATGTA TERM 607 367238 - 367263 + T 90 -7.7 -4.91873 | opp_overlap 367238 TTTAATATAAAAAAA GTAGTAAGCAA ATAT TTACTTACTAC TTTTTGGTTAATGTA CPE0288 368424 - 367303 - | flavoprotein TERM 608 368775 - 368733 - R 100 -14 -3.34013 | opp_overlap 368724 368725 368733 368737 368740 368747, overlap 368737 368740 TATCCTTTTAATTAA TTAATAATATCAATTAATAA AAT TTATTATTTGATATTATTAA TTATACACTTTTAGG TERM 609 368733 - 368775 + r 100 -14 -3.42366 | opp_overlap 368733 368737 368740, overlap 368724 368725 368737 368740 368747 TATCCTTTTAATTAA TTAATAATATCAATTAATAA AAT TTATTATTTGATATTATTAA TTATACACTTTTAGG TERM 610 368771 - 368737 - R 90 -10.4 -3.45366 | opp_overlap 368724 368733 368725 368737 368740 368747, overlap 368733 368740 CTTTTAATTAATTAA TAATATCAATTAATAA AAT TTATTATTTGATATTA TTAATTATACACTTT TERM 611 368737 - 368771 + r 90 -10.4 -3.46234 | opp_overlap 368737 368733 368740, overlap 368724 368733 368725 368740 368747 CTTTTAATTAATTAA TAATATCAATTAATAA AAT TTATTATTTGATATTA TTAATTATACACTTT TERM 612 368740 - 368768 + r 75 -7.7 -3.8591 | opp_overlap 368737 368733 368740, overlap 368724 368737 368733 368725 368747 TTAATTAATTAATAA TATCAATTAATAA AAT TTATTATTTGATA TTATTAATTATACAC TERM 613 368768 - 368740 - R 75 -7.7 -3.86031 | opp_overlap 368724 368740 368737 368733 368725 368747, overlap 368737 368733 TTAATTAATTAATAA TATCAATTAATAA AAT TTATTATTTGATA TTATTAATTATACAC TERM 614 368975 - 368942 - R 90 -12.7 -2.73028 | opp_overlap 368942 368948, overlap 368948 AAATATGGATAGAAG TAAAAATAGCCATAC TAAA GTATGGCTATTTTAA ATTGATTGTTATTTA TERM 615 368942 - 368975 + r 91 -12.7 -2.78237 | opp_overlap 368942 368948, overlap 368948 AAATATGGATAGAAG TAAAAATAGCCATAC TAAA GTATGGCTATTTTAA ATTGATTGTTATTTA TERM 616 368948 - 368969 + r 100 -11.7 -4.32804 | opp_overlap 368942 368948, overlap 368942 GGATAGAAGTAAAAA TAGCCATAC TAAA GTATGGCTA TTTTAAATTGATTGT TERM 617 368969 - 368948 - R 100 -11.7 -4.96646 | opp_overlap 368948 368942, overlap 368942 GGATAGAAGTAAAAA TAGCCATAC TAAA GTATGGCTA TTTTAAATTGATTGT CPE0289 372418 - 369002 - | endo-beta-N-acetylglucosaminidase TERM 618 369544 - 369565 + g 71 -5.9 -4.47183 | overlap 369547 GTTTGTCTGGATTTT CTGGTTGAT CAGG ATCAACTGG TTTATTTGAATCATC TERM 619 371307 - 371295 - G 79 -7.7 -4.27443 | TTAGCATCAAAATAA GTCCA GCT TGGAC AATATAGACCTAATG TERM 620 372365 - 372353 - G 72 -4.1 -5.14626 | AGGATTAAAAGAAAA TGCAA ATG CTGCA AAAACACAAAGTAAA TERM 621 372615 - 372603 - H 70 -4.9 -4.86216 | ATAAAAAAGAAGAAA TTTTC ACA GAAAA ATACAAAAAAAATGA TERM 622 372694 - 372707 + H 82 -2.4 -6.22802 | ATATGTTTATATGTG CATG ATTTGA CATG TTTTTTTTTATAAAG TERM 623 373057 - 373026 - g 76 -9.7 -2.82529 | gap 1, opp_overlap 373023 373035, overlap 373023 CATAAGTACGAAGTA TCACCTAT-ACATC TAATT GATGTTATAGGTGA AGACGTTGATAACTG CPE0290 372789 - 373094 + | hypothetical protein acpS 373143 - 373544 + | 4'-phosphopantetheinyl transferase TERM 624 375004 - 374994 - g 72 -2.6 -5.42265 | GGAAATTATAAAAAA TATT CCT AATA AAATTAAAGAATTGA CPE0292 373531 - 375030 + | carbohydrate kinase family protein CPE0293 375091 - 375684 + | hypothetical protein TERM 625 375732 - 375681 - f 93 -9.1 -4.82855 | opp_overlap 375686 375687 375731, overlap 375674 375687 TAGTAAAGTTAAAAA TTAAAATTAATATTGTGATTGCT TTTTTT AGCAATCACAATATTAAATTTTG TAAATTATTTATATT TERM 626 375686 - 375727 + F 100 -13.4 -4.51847 | opp_overlap 375681 375687, overlap 375687 AAGTTAAAAATTAAA ATTAATATTGTGATTGCT TTTTTT AGCAATCACAATATTAAA TTTTGTAAATTATTT TERM 627 375726 - 375687 - f 100 -16.9 -4.78661 | opp_overlap 375686 375687, overlap 375681 AGTTAAAAATTAAAA TTAATATTGTGATTGCT TTTTTT AGCAATCACAATATTAA ATTTTGTAAATTATT TERM 628 375687 - 375726 + F 100 -16.9 -3.29481 | opp_overlap 375687 375681, overlap 375686 AGTTAAAAATTAAAA TTAATATTGTGATTGCT TTTTTT AGCAATCACAATATTAA ATTTTGTAAATTATT CPE0294 375931 - 376173 + | hypothetical protein TERM 629 376357 - 376346 - g 71 -5.8 -4.38748 | TTCACAAATAAATAA GGCA AAAT TGCC TACACATGTAGAAAT CPE0295 376179 - 376532 + | PemK family protein TERM 630 376576 - 376541 - f 95 -11.4 -3.65434 | opp_overlap 376542 376545, overlap 376533 376542 376545 ACAATAATTAGATAA CTTAGGCTATGATTAA ATAT TTAATCATAGCCTTAA TTTTTTACTCTTAAA TERM 631 376575 - 376542 - f 91 -12.7 -2.78176 | opp_overlap 376542 376545, overlap 376541 376533 376545 CAATAATTAGATAAC TTAGGCTATGATTAA ATAT TTAATCATAGCCTTA ATTTTTTACTCTTAA TERM 632 376542 - 376576 + F 100 -11.1 -5.27779 | gap 1, opp_overlap 376542 376541 376533 376545, overlap 376545 CAATAATTAGATAAC TT-AGGCTATGATTAA ATAT TTAATCATAGCCTTAA TTTTTTACTCTTAAA TERM 633 376572 - 376545 - f 100 -14.4 -2.64765 | opp_overlap 376542 376545, overlap 376542 376541 376533 TAATTAGATAACTTA GGCTATGATTAA ATAT TTAATCATAGCC TTAATTTTTTACTCT TERM 634 376545 - 376572 + F 100 -14.4 -3.9735 | opp_overlap 376545 376542 376541 376533, overlap 376542 TAATTAGATAACTTA GGCTATGATTAA ATAT TTAATCATAGCC TTAATTTTTTACTCT TERM 635 376829 - 376797 - f 81 -7.9 -4.43949 | opp_overlap 376799, overlap 376799 AAAATCAAAGAGAAA TAGAGTAGTCTAATA GGG TATTAGAGTACTCTT AATGAAAGCAAAAAG TERM 636 376799 - 376827 + F 87 -10.5 -3.14132 | opp_overlap 376799 376797 AATCAAAGAGAAATA GAGTAGTCTAATA GGG TATTAGAGTACTC TTAATGAAAGCAAAA TERM 637 376827 - 376799 - f 91 -10.5 -3.79096 | opp_overlap 376799, overlap 376797 AATCAAAGAGAAATA GAGTAGTCTAATA GGG TATTAGAGTACTC TTAATGAAAGCAAAA tktN 376970 - 377794 + | transketolase N-terminal section tktC 377794 - 378738 + | transketolase C-terminal section TERM 638 378802 - 378746 - f 100 -14.2 -3.48185 | gap 1, opp_overlap 378761, overlap 378739 378758 378761 AAAGATAATCTATAA GATATAAAAAAAGAAGCAGCATGAGTA ATTT TTCTCATGCTGCTTTTTTCTTTATA-C ATAAAAATACAAAAA TERM 639 378791 - 378758 - f 100 -11.1 -5.80248 | opp_overlap 378761, overlap 378746 378761 TAAGATATAAAAAAA GAAGCAGCATGAGTA ATTT TTCTCATGCTGCTTT TTTCTTTATACATAA TERM 640 378761 - 378788 + F 100 -12.8 -5.72622 | opp_overlap 378761 378758 378746 GATATAAAAAAAGAA GCAGCATGAGTA ATTT TTCTCATGCTGC TTTTTTCTTTATACA TERM 641 378788 - 378761 - f 100 -12.8 -4.92669 | opp_overlap 378761, overlap 378758 378746 GATATAAAAAAAGAA GCAGCATGAGTA ATTT TTCTCATGCTGC TTTTTTCTTTATACA CPE0298 378965 - 379822 + | hypothetical protein TERM 642 380285 - 380269 - gf 73 -3.7 -5.25699 | overlap 380271 ATCATAGAAGAAAAA TAGGAAT GGT ATTCCAA GACTTTAGATTAATA TERM 643 380283 - 380271 - gf 72 -6.3 -4.24787 | overlap 380269 CATAGAAGAAAAATA GGAAT GGT ATTCC AAGACTTTAGATTAA ftsE 380028 - 380714 + | cell-division ATP-binding protein TERM 644 381209 - 381187 - gf 85 -10 -3.2827 | opp_overlap 381186 381187 381189 GTAGGTAATGACGAA GAGCTTATAG GTA CTATAAACTC CTTTGTAAAAGTTAT ftsX 380680 - 381612 + | cell-division protein TERM 645 381676 - 381635 - f 80 -6.2 -5.1764 | gap 1, opp_overlap 381635 TATAGAATATAAAAA GCTTAAAATACG-TAAACT ATTTA AATATAGCGTATTTTAAGC TTTTTTTTGAAAGGG TERM 646 381635 - 381676 + F 79 -4 -5.75342 | gap 1, opp_overlap 381635 TATAGAATATAAAAA GCTTAAAATACG-TAAACT ATTTA AATATAGCGTATTTTAAGC TTTTTTTTGAAAGGG CPE0301 381701 - 382987 + | carboxyl-terminal protease CPE0302 383010 - 384290 + | hypothetical protein uvrB 384378 - 386357 + | excinuclease ABC subunit B CPE0304 386623 - 387474 + | degV family protein TERM 647 387489 - 387534 + F 100 -17.3 -4.22214 | opp_overlap 387494, overlap 387494 ATTAAATATAGTTTA AAAAATAAGCCTGATAAACTT ATTA GAGTTTATCAGGCTTATTTTA TTGTTTTAGGTAAAT TERM 648 387529 - 387494 - f 100 -16.5 -5.08169 | opp_overlap 387494 387489 ATATAGTTTAAAAAA TAAGCCTGATAAACT TATTAG AGTTTATCAGGCTTA TTTTATTGTTTTAGG TERM 649 387494 - 387529 + F 100 -17.2 -5.093 | opp_overlap 387494, overlap 387489 ATATAGTTTAAAAAA TAAGCCTGATAAACTT ATTA GAGTTTATCAGGCTTA TTTTATTGTTTTAGG CPE0305 387705 - 388430 + | ABC transporter TERM 650 389433 - 389455 + G 77 -7.2 -4.28994 | GCCTATATTTATATT TATTTTCTTT ATT AAAGGAAATA TTTTAGTAAATGATA CPE0306 388423 - 390021 + | hypothetical protein TERM 651 390088 - 390121 + F 100 -14.3 -4.72846 | opp_overlap 390088 390091 390095, overlap 390095 TATTATTTTAGTAAA GAACAAATTAAAATT ACAA AATTTTAATTTGTTC TTTTTAAATATATAG TERM 652 390121 - 390088 - f 100 -14.3 -3.75169 | opp_overlap 390088 390095, overlap 390091 390095 TATTATTTTAGTAAA GAACAAATTAAAATT ACAA AATTTTAATTTGTTC TTTTTAAATATATAG TERM 653 390118 - 390091 - f 93 -10.2 -4.00756 | opp_overlap 390088 390095, overlap 390088 390095 TATTTTAGTAAAGAA CAAATTAAAATT ACAA AATTTTAATTTG TTCTTTTTAAATATA TERM 654 390095 - 390114 + F 70 -5.2 -4.76802 | opp_overlap 390095 390091 390088, overlap 390088 TTAGTAAAGAACAAA TTAAAATT ACAA AATTTTAA TTTGTTCTTTTTAAA TERM 655 391200 - 391222 + G 78 -6.4 -4.77438 | overlap 391189 391203 AGTATTTGAACTTGG GTTTAAAGTT TTA AACTTTATAC TTTTTAATACTAAGT CPE0307 390238 - 391242 + | lipase TERM 656 391277 - 391289 + F 74 -4.9 -5.09426 | opp_overlap 391277 ATATTTTAATAACTA CTTAT CAT ATAAG TTTTTTAAAATTAAA CPE0308 391401 - 392966 + | MutS domain protein CPE0309 392981 - 393667 + | transcriptional regulator TERM 657 393833 - 393808 - f 91 -10.7 -3.54984 | opp_overlap 393808, overlap 393802 AGTAATAAATATCAA TATAGCATATT AAAT AATATGCTATA TTTTATAAAAGAAAA TERM 658 393808 - 393833 + F 95 -10.7 -4.36914 | opp_overlap 393808 393802 AGTAATAAATATCAA TATAGCATATT AAAT AATATGCTATA TTTTATAAAAGAAAA TERM 659 393861 - 393849 - f 80 -6.3 -5.18371 | opp_overlap 393848 393849 TTTTATAAAAGAAAA TTGGT CAT ACCAA AATTTTTTATGGTAT TERM 660 393930 - 393968 + G 83 -9.8 -3.68222 | TTATGTTTTTTCTTG CTCTTATACCTATAATAA TTC TAATTATAGGTTTAGGAG TTCTTAAAATTCCAG TERM 661 394316 - 394326 + G 86 -5.4 -5.51402 | ATAATGGCAGCCTTA GGAT TTA ATCC TTTTTTTGCCTCTGT CPE0310 393902 - 395425 + | L-lactate permease TERM 662 395402 - 395414 + F 78 -6.3 -5.06585 | opp_overlap 395401 GGTTTAATAAGCTAT TTAGG AAG CCTAA TTTTTGTGTAATTTC etfB 395519 - 396307 + | electron transfer flavoprotein beta-subunit eftA 396320 - 397513 + | electron-transfer flavoprotein alpha-subunit CPE0313 397515 - 398915 + | glycolate oxidase subunit TERM 663 398960 - 398990 + T 100 -17.2 -5.58179 | opp_overlap 398960 AAGTTAATAAAAAAA TACTCCTTTTAAAC TTA GTTTAAAAGGAGTA TTTTTTATTATGATG TERM 664 398990 - 398960 - T 100 -17.2 -5.83226 | opp_overlap 398960 AAGTTAATAAAAAAA TACTCCTTTTAAAC TTA GTTTAAAAGGAGTA TTTTTTATTATGATG CPE0314 399396 - 398998 - | hypothetical protein TERM 665 399455 - 399507 + H 95 -11.1 -3.77325 | opp_overlap 399465, overlap 399450 399475 399502 GTCCTTAAGTTGAAG TTTTCATATATTAAAAGAAATCTAA AGT TTGGATTTACTTTAATATGTGAAAA TTAATTTTCATTGTG sipS 399764 - 400273 + | type I signal peptidase TERM 666 400420 - 400458 + T 88 -6.8 -5.54079 | opp_overlap 400422, overlap 400436 GTTTTAGATGTATGA CAGTAGATAGTTTTGTGT AAA AAGCAATACTACCTACTG TTTTTTACTTTTTAA TERM 667 400436 - 400466 + T 70 -4.9 -4.85129 | opp_overlap 400422, overlap 400420 AGTAGATAGTTTTGT GTAAAAAGCAATA CTACC TACTGTTTTTTAC TTTTTAATATCTAAT CPE0316 401295 - 400516 - | transcriptional regulator TERM 668 400862 - 400844 - G 74 -7.5 -3.93117 | TTAACTACAGAAGAA GAGAAGT GCTTT ACTTCTC CACCAGTTATAAAGA TERM 669 401394 - 401380 - H 75 -5.8 -5.0538 | opp_overlap 401379, overlap 401357 TTTTATTGTAAAAAA TTGAAA GGT TTTCAA CGTTGTGTTCATGTA fucK 401487 - 402890 + | rhamnulokinase fucI 402971 - 404758 + | L-fucose isomerase fucA 404788 - 405444 + | L-fuculose phosphate aldolase CPE0320 405449 - 405886 + | hypothetical protein CPE0321 405877 - 406350 + | PTS system protein TERM 670 406980 - 406969 - g 83 -3 -5.76949 | opp_overlap 406969 GATGCTTAAAAAAAA TATG TGGC CATA TTTACTAGTTGGTTT CPE0322 406367 - 407143 + | PTS system protein TERM 671 407668 - 407654 - g 81 -5.8 -5.22039 | overlap 407659 TTCAAAGTCAAAAAA CTAAAT CTA ATTTAG AGAATATTACTAATA CPE0323 407140 - 407943 + | PTS system protein CPE0324 408080 - 409396 + | glycosyl hydrolase CPE0325 409414 - 411303 + | hypothetical protein TERM 672 411480 - 411508 + F 100 -12.6 -3.86897 | opp_overlap 411468 411485 411486, overlap 411485 411504 AAATTAAATATTATC TAAAATCACCCG CAAAT CGGGTGGTTTTA TTTATACCAAATAAA TERM 673 411503 - 411485 - f 70 -5.9 -4.24326 | opp_overlap 411480 411485, overlap 411486 AAATATTATCTAAAA TCACCCG CAAAT CGGGTGG TTTTATTTATACCAA TERM 674 411485 - 411503 + F 91 -8.1 -4.99043 | opp_overlap 411485 411486, overlap 411480 AAATATTATCTAAAA TCACCCG CAAAT CGGGTGG TTTTATTTATACCAA TERM 675 411502 - 411486 - f 80 -9.4 -3.13511 | opp_overlap 411485 411480, overlap 411485 AATATTATCTAAAAT CACCCG CAAAT CGGGTG GTTTTATTTATACCA lacA 411556 - 411984 + | galactose-6-phosphate isomerase subunit LacA lacB 412020 - 412535 + | galactose-6-phosphate isomerase subunit LacB TERM 676 412882 - 412850 - g 86 -9.4 -3.92178 | overlap 412877 412878 ATGAGGGGAATCAAA CAGAAATACTTGAA TCAGG TCCAAATATTTCTG AGAAAGAAGCAAATA lacC 412552 - 413484 + | tagatose-6-phosphate kinase TERM 677 413578 - 413609 + F 73 -2.4 -5.69473 | overlap 413593 TGTTCTTAGCAATCT CATTATCTTCTTAA GCTT TGAAGAAAGTAATG TTTTTTTATAATCTA TERM 678 413758 - 413746 - g 70 -3.5 -5.11937 | opp_overlap 413746 AATAATCTGAAAAAA TATAT CAA ATATA TTTTAAGTGTAATAT CPE0329 413725 - 416112 + | hypothetical protein TERM 679 416267 - 416227 - T 100 -15.9 -3.4214 | opp_overlap 416234 416265, overlap 416230 416234 AATTTGAATATAAGA TAATAAATAGCTTTAAGCT ATA AACTTAAAGCTATTTATCA CATAGTGGTTGCTAT TERM 680 416264 - 416230 - T 100 -15.4 -3.83921 | opp_overlap 416234, overlap 416227 416234 TTGAATATAAGATAA TAAATAGCTTTAAGCT ATA AACTTAAAGCTATTTA TCACATAGTGGTTGC TERM 681 416260 - 416234 - T 100 -11.8 -4.50257 | opp_overlap 416234, overlap 416230 416227 ATATAAGATAATAAA TAGCTTTAAGCT ATA AACTTAAAGCTA TTTATCACATAGTGG TERM 682 416234 - 416260 + T 86 -9.6 -3.90318 | opp_overlap 416234 416230 416227 ATATAAGATAATAAA TAGCTTTAAGCT ATA AACTTAAAGCTA TTTATCACATAGTGG TERM 683 416301 - 416329 + T 100 -9 -5.86061 | AGATACCTCTTCTGT GCTCTAAGGT TTTTTGCTT ACCTTAGAGC TTTTTTTTAATAAGA CPE0330 416703 - 416323 - | hypothetical protein CPE0331 417022 - 417696 + | hypothetical protein TERM 684 417743 - 417724 - T 73 -4.4 -5.11254 | opp_overlap 417724 AAGAATAAAAATAAA TTTTATCA CAAT TGACAAAA CTATTATTTAATTAA TERM 685 417835 - 417873 + T 90 -7.7 -4.95876 | gap 1, opp_overlap 417835 ATTTAATTAAAAAAA GACTGTGCTAAAA-CTAA GAAA TAAGATTTTAGCATAGTC TTTTTAATTATAATT TERM 686 417873 - 417835 - T 86 -5.5 -5.64006 | gap 1, opp_overlap 417835 ATTTAATTAAAAAAA GACTGTGCTAAAA-CTAA GAAA TAAGATTTTAGCATAGTC TTTTTAATTATAATT CPE0332 418510 - 417887 - | DedA family protein TERM 687 418595 - 418559 - R 100 -14 -4.15632 | opp_overlap 418565 ATTATTAGATATAAA TATAGACCATGCTAAT ACCGA ATTGGCATGGTCTATA GAAAACTATAATTAA TERM 688 418565 - 418589 + r 76 -9.4 -2.87683 | opp_overlap 418559 AGATATAAATATAGA CCATGCTAAT ACCGA ATTGGCATGG TCTATAGAAAACTAT CPE0333 421264 - 418607 - | cation-transporting ATPase TERM 689 419444 - 419458 + g 79 -5.7 -5.08601 | ACCATCACCAGTCAT GGCAA CTACA TTGCC TTTTTCTTGCCATGC CPE0334 422038 - 422601 + | hypothetical protein TERM 690 422706 - 422686 - f 75 -5.5 -4.94487 | TTAGAAAATATAAAA TTAGTAATG TTT CATTTCTAA GATATAATAAACTAA TERM 691 422948 - 422971 + F 100 -8.2 -5.65513 | opp_overlap 422948 TGAGATTATTATATA TTCCTAGGCT TTTT GGCTTAGGAA TTTTTTTAATTCATA xpt 423159 - 423731 + | xanthine phosphoribosyltransferase TERM 692 424048 - 424027 - f 78 -5.3 -5.09521 | opp_overlap 424021, overlap 424021 TTAAGAAAGTAAAAA GTTTTTAAT TGTA ATCAAAAAC CACATTATAAGCTAA TERM 693 424332 - 424344 + G 76 -2.7 -5.53436 | overlap 424339 GCACAATGTTTATAG CTTTT AGT AGAAG TTTTTTATCTTCTAT CPE0336 424217 - 425149 + | hypothetical protein TERM 694 425220 - 425243 + F 100 -8.2 -5.626 | ATAAATTATTGATTA GGCTGTATCT ATTT AGATGCAGTC TTTTTTTATGCAATA CPE0337 425340 - 426722 + | amino acid transporter TERM 695 426731 - 426766 + T 73 -5.6 -4.77047 | opp_overlap 426731 TAATTAAAATAAAAA GAGTTATAAAAGTTAT TTTA AAATCTTTTATAGCTC TTTATTTGTGTTTTA TERM 696 426766 - 426731 - T 73 -3.4 -5.54338 | opp_overlap 426731 TAATTAAAATAAAAA GAGTTATAAAAGTTAT TTTA AAATCTTTTATAGCTC TTTATTTGTGTTTTA CPE0338 428180 - 426876 - | hypothetical protein tldD 428452 - 429837 + | TldD protein pmbA 429853 - 431202 + | TldD/PmbA family protein CPE0341 431519 - 433105 + | aspartate aminotransferase TERM 697 433162 - 433210 + F 100 -18.7 -4.19276 | opp_overlap 433164 433169, overlap 433164 433169 TAATAGTAGGTAAAT AATAAAAGTAAGGCAAGTAATAT TAG ATATTATTTGCCTTACTTTTATA TTTTAGAAGTTTTAG TERM 698 433164 - 433208 + F 100 -21.3 -3.68674 | opp_overlap 433164 433169, overlap 433162 433169 ATAGTAGGTAAATAA TAAAAGTAAGGCAAGTAATAT TAG ATATTATTTGCCTTACTTTTA TATTTTAGAAGTTTT TERM 699 433208 - 433164 - f 100 -19.1 -3.98075 | opp_overlap 433164 433162 433169, overlap 433169 ATAGTAGGTAAATAA TAAAAGTAAGGCAAGTAATAT TAG ATATTATTTGCCTTACTTTTA TATTTTAGAAGTTTT TERM 700 433203 - 433169 - f 100 -14.6 -5.011 | opp_overlap 433164 433162 433169, overlap 433164 AGGTAAATAATAAAA GTAAGGCAAGTAATAT TAG ATATTATTTGCCTTAC TTTTATATTTTAGAA TERM 701 433169 - 433203 + F 100 -16.8 -4.89567 | opp_overlap 433169 433164, overlap 433164 433162 AGGTAAATAATAAAA GTAAGGCAAGTAATAT TAG ATATTATTTGCCTTAC TTTTATATTTTAGAA CPE0342 433417 - 433899 + | methylated-DNA-protein-cystein methyltransferase recQ 433948 - 436122 + | ATP-dependent DNA helicase RecQ TERM 702 436183 - 436152 - f 79 -8.8 -3.71672 | opp_overlap 436155, overlap 436148 436155 TGTGATGAAAAGTAA GGAGGACTATGTCA AGAG TGACATAGTCCTTA TTTAAATATATAAAA TERM 703 436155 - 436180 + F 100 -14.9 -3.99985 | opp_overlap 436152 436148 436155 GATGAAAAGTAAGGA GGACTATGTCA AGAG TGACATAGTCC TTATTTAAATATATA TERM 704 436180 - 436155 - f 100 -14.9 -2.95404 | opp_overlap 436155, overlap 436152 436148 GATGAAAAGTAAGGA GGACTATGTCA AGAG TGACATAGTCC TTATTTAAATATATA TERM 705 436854 - 436844 - g 70 -5.4 -4.56133 | opp_overlap 436844 TTTTAATAAGGAAAA GATG CTT CATC TAGATTGTGTTTTTA CPE0344 436353 - 437150 + | hypothetical protein TERM 706 437204 - 437236 + F 75 -5.8 -5.0538 | opp_overlap 437233 TTATGATATAGTGTT TTTATCTGATGAAT TCTTT AGTCATTAGATAAA TTTTTTAAAATAAAA CPE0345 437275 - 438732 + | hypothetical protein TERM 707 438773 - 438801 + F 100 -9 -5.46706 | opp_overlap 438773 TTAATTTAGTTAAGA GGTTACATTCAT ATTAA GTGAGTGTAACC TTTTTATTTTAGGAT CPE0346 438898 - 439647 + | transcriptional regulator TERM 708 439650 - 439676 + T 78 -6 -5.07652 | CAATAAAAATTAGTA CTATGCTTATTA ATT TACTAAGTATAG TTTTATTTTCAGAAG CPE0347 440452 - 439781 - | transcriptional regulator TERM 709 439814 - 439827 + g 76 -3.9 -5.43974 | AATATTTTCTAACTC TTCTT TATT AAGAA TTTTTATTTCATTTT TERM 710 440243 - 440258 + g 71 -7.6 -3.38627 | opp_overlap 440236 440243, overlap 440242 TTCCAAAAGTAAGGA CTTACC GTTA GGTAAG GTTTTGTATACTTTT TERM 711 440601 - 440638 + H 100 -10 -5.67063 | opp_overlap 440605, overlap 440605 TACTTTAAATTCTAT AAAAGAGTGGTGAGCA AATTCA TGCTAACCACTCTTTA TTTTTTTATAATAGA TERM 712 440605 - 440634 + H 100 -10.8 -5.27709 | opp_overlap 440605, overlap 440601 TTAAATTCTATAAAA GAGTGGTGAGCA AATTCA TGCTAACCACTC TTTATTTTTTTATAA TERM 713 440634 - 440605 - H 100 -10.8 -4.44974 | opp_overlap 440605 440601 TTAAATTCTATAAAA GAGTGGTGAGCA AATTCA TGCTAACCACTC TTTATTTTTTTATAA uvrA 441396 - 444215 + | excinuclease ABC subunit A TERM 714 444270 - 444311 + F 100 -11.9 -4.72497 | opp_overlap 444272, overlap 444272 GAATAGATTAATTTA AATAGCTACCAGAATTTAT GGCT ATAAATTCTGATAGCTATA TTTTATTCATAGATA TERM 715 444272 - 444309 + F 100 -14.5 -3.97413 | opp_overlap 444272, overlap 444270 ATAGATTAATTTAAA TAGCTACCAGAATTTAT GGCT ATAAATTCTGATAGCTA TATTTTATTCATAGA TERM 716 444309 - 444272 - f 100 -16.7 -3.80189 | opp_overlap 444272 444270 ATAGATTAATTTAAA TAGCTACCAGAATTTAT GGCT ATAAATTCTGATAGCTA TATTTTATTCATAGA CPE0349 444550 - 444984 + | FHA domain protein ftsW 444998 - 446227 + | cell cycle protein, FtsW/RodA/SpoVE family CPE0351 446228 - 447691 + | penicillin-binding protein TERM 717 447707 - 447689 - f 70 -6.2 -4.19678 | opp_overlap 447677 447692, overlap 447677 447692 GCATATTTTAATAAA TAATTATA GAA TATAATTA AATACTTAATAAAAA TERM 718 447771 - 447725 - f 95 -7 -5.8187 | opp_overlap 447724 447728 447729, overlap 447729 TACTTAATAAAAAAA TAAT-CGCCCTAATATTACTAT GAAAA ATAGTA-TGTTAGGGCGTATTA ATTTATAGTGATTTT TERM 719 447729 - 447766 + F 95 -11.6 -3.38986 | gap 1, opp_overlap 447725 447729, overlap 447728 447724 TAATAAAAAAATAAT CGCCCTAATATTACTAT GAAAA ATAGTA-TGTTAGGGCG TATTAATTTATAGTG TERM 720 447766 - 447729 - f 83 -9.4 -3.55421 | gap 1, opp_overlap 447729 447728 447724, overlap 447725 TAATAAAAAAATAAT CGCCCTAATATTACTAT GAAAA ATAGTA-TGTTAGGGCG TATTAATTTATAGTG TERM 721 447925 - 447913 - g 80 -6.3 -4.96646 | opp_overlap 447913 447912 TTATATAATGAAAAA TTCTC TTG GAGAA GTTATTTATGTAGGA TERM 722 449438 - 449419 - g 74 -7.2 -3.89302 | overlap 449422 449431 AGGAATTATATTAAA TAACGAGG AAAT CCTCATTA GAAGGGGTTCAGGCC uvrC 447848 - 449710 + | excinuclease ABC subunit C murB 449859 - 450773 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 723 450801 - 450780 - f 70 -7.3 -3.76884 | opp_overlap 450781, overlap 450781 450783 AGAGATTAGTAAGAA GGAGTATGC ATGT GCATACTCT TTTTTTAGCCGTATC TERM 724 450781 - 450800 + F 100 -10.8 -5.42862 | opp_overlap 450780 450781 450783 GAGATTAGTAAGAAG GAGTATGC ATGT GCATACTC TTTTTTTAGCCGTAT TERM 725 450800 - 450781 - f 82 -10.8 -2.85407 | opp_overlap 450781, overlap 450780 450783 GAGATTAGTAAGAAG GAGTATGC ATGT GCATACTC TTTTTTTAGCCGTAT TERM 726 450932 - 450958 + F 100 -11.8 -4.57063 | AGAAATTAGTTTGTT TGCTTTAATTAC TAA GTGATTAAAGCA TTTCTTATGTTTTGA TERM 727 451471 - 451461 - g 72 -2.6 -5.48063 | ATTTAAGAGAAAAAA TAAA TCT TTTA TATGGAGATGGTAAG CPE0354 451013 - 451897 + | hypothetical protein TERM 728 451990 - 451967 - g 83 -10.4 -3.37796 | opp_overlap 451966, overlap 451973 CTTTAGCATCTATAA TTACAATGGC TGTT GCCATTGCAA AGTTAATTGATGAGA CPE0355 451894 - 453240 + | hypothetical protein TERM 729 453410 - 453395 - g 72 -5.4 -4.76193 | opp_overlap 453395, overlap 453388 AATGACAACAGAAAA TCCTGC ATCT GCAAGA TTGATGTTTACTATA TERM 730 453549 - 453537 - g 85 -4.9 -5.52986 | ATGGGAGTAAAAAAA TTACT TGA AGTAA CAGGTATATTAAGAG CPE0356 453243 - 454193 + | hypothetical protein TERM 731 454257 - 454221 - f 72 -9 -2.60571 | opp_overlap 454231, overlap 454220 AATCTTTTAAGTAAT TCTTTTAACAGCGAAT ATTAA ATTTGCTGTTAAAAAA CTTAAAAGTTTTTTT CPE0357 454367 - 454921 + | hypothetical protein TERM 732 454926 - 454960 + T 100 -17.6 -4.10159 | opp_overlap 454926 GTTTTAAATAAGAAA TTAAGCCTATATTAAA ATT TTTAATATAGGCTTAA TTTAGTTTAAATGTT TERM 733 454960 - 454926 - T 100 -17.6 -4.56978 | opp_overlap 454926 GTTTTAAATAAGAAA TTAAGCCTATATTAAA ATT TTTAATATAGGCTTAA TTTAGTTTAAATGTT CPE0358 456294 - 455050 - | hypothetical protein CPE0359 456844 - 456308 - | RNA polymerase ECF-type sigma factor TERM 734 456531 - 456545 + g 88 -4.2 -5.74684 | opp_overlap 456533, overlap 456533 TATAATTCAGAACTT AACTCC TTT GGAGTG TTTTTATTTTTCTTA TERM 735 456533 - 456543 + g 76 -6.8 -4.45545 | opp_overlap 456533, overlap 456531 TAATTCAGAACTTAA CTCC TTT GGAG TGTTTTTATTTTTCT TERM 736 457512 - 457502 - g 72 -5.4 -4.81852 | GCAGAAGGAATAAAA CCTA TCT TAGG ATGTGAAGTTTATGT TERM 737 458034 - 458022 - g 74 -7.7 -3.84587 | ATGATCCAAATAGAA GAAGG TAT CCTTC TGACCAATTCTATTT dnaE 457313 - 460891 + | DNA polymerase III DnaE TERM 738 461198 - 461176 - f 77 -8 -4.10453 | overlap 461165 461185 461190 TAAATTTTCTTAAAA TTAAAAAAAT AAA ATTTTTTTAA AATAAGTGCATAAAT TERM 739 461197 - 461185 - f 77 -3.5 -5.79588 | overlap 461176 461190 TTAAAATTAAAAAAA TAAAA TTT TTTTA AAATAAGTGCATAAA TERM 740 461200 - 461190 - f 70 -2.6 -5.57888 | overlap 461185 461176 ATTAAAAAAATAAAA TTTT TTT AAAA TAAGTGCATAAATTT TERM 741 461777 - 461767 - g 70 -5.4 -4.59984 | AAAATGGATAGAAAA TCTG TTT CAGA AATCATAAACAGAGG pfkA 461602 - 462561 + | 6-phosphofructokinase TERM 742 462577 - 462599 + F 81 -8 -4.5002 | opp_overlap 462577 462580 TTTGAGTTAATGACA TAATAAATTT TTT AAATTTATTA TTTATTATATATTTT pykA 462655 - 464058 + | pyruvate kinase TERM 743 464099 - 464080 - f 100 -9.4 -4.92783 | opp_overlap 464080 AACTGATTATAAAAA TAGGTAGA GTAT TCTACCTA TTTTTTTTTTATGAA TERM 744 464080 - 464099 + F 100 -9.4 -6.48081 | opp_overlap 464080 AACTGATTATAAAAA TAGGTAGA GTAT TCTACCTA TTTTTTTTTTATGAA TERM 745 464182 - 464210 + F 77 -7.8 -4.12198 | ATAAAAATTTTTTGG TTTATATTTTTA TTAAT TAAAAATATAAA TTTTGAAAGGTTATA TERM 746 464507 - 464540 + F 76 -2.5 -5.95539 | overlap 464510 TGATTCCAAGATGAA AAAGTACTTGATG ACTGATAC CATCGAGTGCTTC TTTTTTTATTTAAAA TERM 747 464510 - 464537 + F 70 -4.2 -5.01858 | overlap 464507 TTCCAAGATGAAAAA GTACTTGATG ACTGATAC CATCGAGTGC TTCTTTTTTTATTTA TERM 748 464629 - 464610 - f 78 -6.5 -4.8277 | AAATACAAAAAATAA CCTCAAA TAATAT TTTGAGG AGGATTTGAATATGA CPE0363 464641 - 464997 + | hypothetical protein TERM 749 465050 - 464995 - f 80 -6.2 -5.24531 | gap 3, opp_overlap 465001 465007, overlap 464998 465001 465007 ACTTTTTATAAAAAA TAATTATTAAAAGCTAGAA-CTAAAAT ATTAA ATTTTAGGTTCTAGCTTTT--TAATTA TATGGTAAAATATAT TERM 750 465050 - 464998 - f 77 -6.9 -4.72201 | gap 2, opp_overlap 465001 465007, overlap 464995 465001 465007 TTTTATAAAAAATAA TTATTAAAA-GCTAGAA-CTAAAAT ATTAA ATTTTAGGTTCTAGCTTTTTAATTA TATGGTAAAATATAT TERM 751 465001 - 465046 + F 79 -10.2 -2.72649 | gap 1, opp_overlap 464995 464998 465001 465007, overlap 465007 TATAAAAAATAATTA TTAAAAGCTAGAA-CTAAAAT ATTAA ATTTTAGGTTCTAGCTTTTTA ATTATATGGTAAAAT TERM 752 465046 - 465001 - f 85 -10.2 -3.26205 | gap 1, opp_overlap 465001 465007, overlap 464995 464998 465007 TATAAAAAATAATTA TTAAAAGCTAGAA-CTAAAAT ATTAA ATTTTAGGTTCTAGCTTTTTA ATTATATGGTAAAAT TERM 753 465040 - 465007 - f 93 -9.2 -4.40037 | gap 1, opp_overlap 465001 465007, overlap 465001 464995 464998 AAATAATTATTAAAA GCTAGAA-CTAAAAT ATTAA ATTTTAGGTTCTAGC TTTTTAATTATATGG TERM 754 465007 - 465040 + F 100 -9.2 -4.96646 | gap 1, opp_overlap 465007 465001 464995 464998, overlap 465001 AAATAATTATTAAAA GCTAGAA-CTAAAAT ATTAA ATTTTAGGTTCTAGC TTTTTAATTATATGG CPE0364 465305 - 466102 + | dehydrogenase TERM 755 466308 - 466298 - g 76 -5.4 -5.01732 | AAGTTTCTGAAAAAA CTAC TAA GTAG AGCATTTATAGTTGG TERM 756 466568 - 466558 - g 70 -4 -4.99056 | TAAGACAAGCAAAAA GTTT AGA AAAC AAATAAAAGCTTCTT clsB 466277 - 467812 + | cardiolipin synthetase TERM 757 467968 - 467988 + F 100 -11.2 -4.87626 | opp_overlap 467968 TAAAAATTTGGAAAA GGAGGCTA AATTA TAGCCTCC TTTTTAGTGTTAGAG TERM 758 467988 - 467968 - f 100 -11.2 -4.20883 | opp_overlap 467968 TAAAAATTTGGAAAA GGAGGCTA AATTA TAGCCTCC TTTTTAGTGTTAGAG TERM 759 469568 - 469545 - g 77 -8.2 -3.74749 | opp_overlap 469545 ATTAGAAAGCGTAAA GAGATGTAGA AATA TCCACACCTC CTTTTTAGATCAAGG CPE0366 468439 - 470001 + | GntR family transcriptional regulator/aminotransferase CPE0367 470131 - 471498 + | RNA methyltransferase TERM 760 471627 - 471661 + F 90 -8 -5.08824 | opp_overlap 471625 471627 AAAGAAAAAACAATA CCCTTTAAAGGC AGAAGAAAAGA GCCTTTAGAGGG TTTTTTGCGTGAAAA TERM 761 472048 - 472030 - f 84 -4.7 -5.70829 | opp_overlap 472022 472030 472032, overlap 472022 AATAGTATAAAAAAA TACAATT TATTT AATTGTA TATATATAGTGAGTG TERM 762 472199 - 472185 - f 77 -6.4 -4.68528 | opp_overlap 472187, overlap 472187 AAAGTCAAAAAATAA TACCCT CTA AGGGCA GAGAAAAGAGCCTTT TERM 763 472187 - 472220 + F 95 -8.2 -5.18371 | opp_overlap 472187 472185 AGTCAAAAAATAATA CCCTCTAAGGGC AGAGAAAAGA GCCTTTGGAGGG TTTTGTTTTATAAAA TERM 764 472891 - 472905 + G 79 -5.8 -5.16237 | opp_overlap 472890 GATATTGGATTAATT GAAAAT CAT ATTTTC TTTTTTGATAGAGTT CPE0368 472441 - 473340 + | hypothetical protein TERM 765 474888 - 474872 - g 93 -5.9 -5.7827 | AATAGAAAGAAAAAA CAAAACT TTA AGTTCTG ATAATTTACTTGCTA TERM 766 476272 - 476254 - g 72 -6.2 -4.26327 | overlap 476251 TAGTTAGTAAAATAA TTTTTATT GAA AATAAAAA TATAGAAAATATTAG TERM 767 476698 - 476661 - g 74 -7.3 -3.98745 | opp_overlap 476670, overlap 476670 GAAGTATGCAAAGAA TTATTAAAAGATACTTT GTAT AAAGAATCTATTAATAA TGACGAAAAAGAAAT CPE0369 473520 - 477425 + | hypothetical protein TERM 768 477859 - 477892 + T 100 -10.4 -5.54907 | opp_overlap 477857 477856 ATCAAAAAAGTAGTA CCCTCTAAAGGC AGAAAAAAGA GCCTTTGGAGGG TTTTTATTTTATAAA CPE0370 478819 - 477962 - | transcriptional regulator TERM 769 480210 - 480194 - g 72 -8.1 -3.27619 | overlap 480193 AAATTTTAAAGAAAG CATATCT TCA AGATATG TCAGCTGAAGAAGCT CPE0371 479008 - 480276 + | hypothetical protein CPE0372 480350 - 481276 + | ABC transporter CPE0373 481293 - 482120 + | suger ABC transporter TERM 770 483833 - 483823 - g 74 -5.4 -4.91712 | opp_overlap 483828, overlap 483828 TGGAACGTATAAAAA TCCA ATA TGGA AGCTCCTTAGTTTAT aga 482148 - 484355 + | alpha-galactosidase CPE0375 484394 - 486931 + | endo-beta-galactosidase C TERM 771 486976 - 486934 - f 100 -13.9 -5.28281 | opp_overlap 486934 486938 ACAAAATAAATAAAA TAAATTCACTCAAAATTTT ATTTG ATAATTTTGAGTGAATTTA TTCATTATAAGACCA TERM 772 486934 - 486976 + F 100 -13.9 -3.44146 | opp_overlap 486934, overlap 486938 ACAAAATAAATAAAA TAAATTCACTCAAAATTTT ATTTG ATAATTTTGAGTGAATTTA TTCATTATAAGACCA TERM 773 486938 - 486972 + F 95 -10.3 -4.36596 | opp_overlap 486934, overlap 486934 AATAAATAAAATAAA TTCACTCAAAATTTT ATTTG ATAATTTTGAGTGAA TTTATTCATTATAAG CPE0376 487133 - 487684 + | hypothetical protein TERM 774 487700 - 487723 + F 80 -6.1 -5.22312 | opp_overlap 487700 TTAATTTTATAGTAA GTACATGTC TTAATT GATATGTAC TTTTTTAATATCCAT CPE0377 487803 - 488381 + | TetR family transcriptional regulator TERM 775 488464 - 488489 + F 95 -9.2 -4.74132 | opp_overlap 488463 488464 488467 AAAATCTTTAGGAAT TTAGGCATAA AGAGAG TTATGCCTAA TTTTTAGTCAGATGT TERM 776 488489 - 488464 - f 75 -9.2 -2.50575 | opp_overlap 488464, overlap 488463 488467 AAAATCTTTAGGAAT TTAGGCATAA AGAGAG TTATGCCTAA TTTTTAGTCAGATGT TERM 777 488642 - 488627 - f 72 -4.8 -4.9448 | opp_overlap 488627 488635, overlap 488622 ACTTAGTAAATAAAA TCTTAT ATTT ATAAGA TTATAACTTATTAAT CPE0378 488731 - 490524 + | 67 kDa myosin-cross-reactive antigen family protein TERM 778 490754 - 490714 - f 77 -7.3 -4.4595 | opp_overlap 490713 490714 490716 490728 GGATAAAATTTAAAA TATTATACTATAAATAT TAAAAAT ATATTTTTAGTATAATA ATATTTAATAGAACT CPE0379 490919 - 492652 + | ABC transporter permease/ATP-binding protein TERM 779 493608 - 493594 - g 76 -10 -2.83163 | opp_overlap 493590, overlap 493593 493596 CATCAGCAATACAAT CAGCAG TGG CTGCTG CTAATAGGGTTTTTG TERM 780 493820 - 493841 + G 70 -5.3 -4.55023 | AGCAGGTAAAACTAC TCTTATTAA TCTT TTAATGAGA TTTTATGATGTTCAA CPE0380 492645 - 494426 + | ABC transporter TERM 781 494489 - 494529 + T 100 -13.8 -3.38604 | gap 1, opp_overlap 494497, overlap 494497 GATTATTTAACCCTA TAG-AAAAAGCAATCTAAA TTAG TTTAGATTGCTTTTTCCTA TTAATCCTTTTAATA TERM 782 494520 - 494497 - T 100 -11.2 -4.98522 | opp_overlap 494489 494497 AACCCTATAGAAAAA GCAATCTAAA TTAG TTTAGATTGC TTTTTCCTATTAATC TERM 783 494497 - 494520 + T 100 -11.2 -4.89233 | opp_overlap 494497, overlap 494489 AACCCTATAGAAAAA GCAATCTAAA TTAG TTTAGATTGC TTTTTCCTATTAATC CPE0381 494905 - 494507 - | hypothetical protein CPE0382 495171 - 496199 + | autolytic lysozyme CPE0383 496521 - 496928 + | hypothetical protein CPE0384 498001 - 497081 - | hypothetical protein TERM 784 497297 - 497315 + g 80 -9 -3.71804 | overlap 497308 TTTTCCAATGATTTT TTCTAAAG CTA CTTTAGAA TCTTTTAAAGTTTCA CPE0385 498485 - 499225 + | oxidoreductase TERM 785 499264 - 499232 - T 100 -16.7 -5.08601 | opp_overlap 499232 499236 GCATTTTAATAAAAA TAAATCCTATGAAAT ATT ATTTCATAGGATTTA TTTTTATGGTGCTGT TERM 786 499232 - 499264 + T 100 -16.7 -4.93898 | opp_overlap 499232, overlap 499236 GCATTTTAATAAAAA TAAATCCTATGAAAT ATT ATTTCATAGGATTTA TTTTTATGGTGCTGT TERM 787 499236 - 499260 + T 100 -13.1 -4.98911 | opp_overlap 499232, overlap 499232 TTTAATAAAAATAAA TCCTATGAAAT ATT ATTTCATAGGA TTTATTTTTATGGTG CPE0386 499979 - 499248 - | transcriptional regulator TERM 788 500412 - 500402 - g 70 -4 -4.89852 | opp_overlap 500410 TTAGATGGAGAAAAA GTAA GCG TTAC CTCAACTGGTATTGG udp 500213 - 500998 + | uridine phosphorylase TERM 789 501352 - 501330 - g 72 -4.2 -5.055 | CTAATCTTCAAAAAA TGGGTATA GCAAACT TACACCCA ATAAAACACGTAGCT deoB 501176 - 502366 + | phosphopentomutase TERM 790 502417 - 502389 - T 100 -12 -3.97056 | opp_overlap 502389 TAAGAATATATGAAA GCTATATCAAAT TTTAT ATTTGATATAGC TTTTCTTATAAAGAT TERM 791 502389 - 502417 + T 100 -12 -4.77567 | opp_overlap 502389 TAAGAATATATGAAA GCTATATCAAAT TTTAT ATTTGATATAGC TTTTCTTATAAAGAT TERM 792 502755 - 502697 - T 87 -7.1 -5.11937 | gap 1, opp_overlap 502697, overlap 502748 AAGAAGGCTAAAAAA GACTTTGGTGAATTTTGA-AGCTTGATT AATA AATCAATATCTCAAAATGGACCAAAGTC TTTTAAATTTTGGAT TERM 793 502697 - 502755 + T 77 -7.1 -4.43272 | gap 1, opp_overlap 502697 502748 AAGAAGGCTAAAAAA GACTTTGGTGAATTTTGA-AGCTTGATT AATA AATCAATATCTCAAAATGGACCAAAGTC TTTTAAATTTTGGAT arcD 504238 - 502793 - | amino acid permease dchS 505246 - 504284 - | histidine decarboxylase, pyruvoyl type TERM 794 505397 - 505408 + H 73 -3 -5.69379 | ATAGTATTTAAAAGT TTTC ATAT GAAA TTTTTTTAGTTGTGT CPE0391 505714 - 506547 + | phosphoesterase CPE0392 506672 - 506824 + | hypothetical protein TERM 795 507425 - 507410 - g 74 -6.8 -4.21908 | CACTATGAGGGAAAA GCTGGC TTTG GCCAAC ATACTAAGTTAGCAA CPE0393 506921 - 507784 + | hypothetical protein nadA 508092 - 508997 + | quinolinate synthetase TERM 796 509151 - 509119 - gf 78 -9.9 -2.55392 | overlap 509115 AAGTCAGTTAATCTA TGCAATTCTTCCCTA GCT CAGGGGGGAATTGCA GTAGCTAGAGGAAAA nadB 509002 - 510321 + | L-aspartate oxidase nadC 510278 - 511117 + | nicotinate-nucleotide pyrophosphorylase uapC 512727 - 511369 - | transporter TERM 797 512827 - 512851 + H 85 -5.9 -5.46657 | opp_overlap 512826 AATAAAAAATATGAG TTCTATTAAAA GTA TTTTAAGAGAA TTTTTTATTGGAATA TERM 798 512963 - 512942 - H 100 -8.8 -5.8187 | opp_overlap 512941 512942 TACTTAATAAAAAAA CAACACCT TTTTAG AGGTGTTG CTTTAAAAACTAGAA TERM 799 512942 - 512963 + H 75 -9.5 -2.73124 | opp_overlap 512942, overlap 512941 TACTTAATAAAAAAA CAACACCTT TTTA GAGGTGTTG CTTTAAAAACTAGAA deoD 513402 - 514220 + | purine nucleoside phosphorylase CPE0399 514310 - 514987 + | transporter CPE0400 515021 - 515662 + | hypothetical protein TERM 800 515721 - 515682 - f 81 -5.4 -5.30189 | gap 2, opp_overlap 515682 TATAATATTAAAAAA GGTGCA--TAAAATCTTA CATTAT TAAGATTTTAGATGCACC TTTTTCATTTTTTTA TERM 801 515682 - 515721 + F 81 -5.4 -5.31158 | gap 2, opp_overlap 515682 TATAATATTAAAAAA GGTGCA--TAAAATCTTA CATTAT TAAGATTTTAGATGCACC TTTTTCATTTTTTTA CPE0401 515887 - 516204 + | hypothetical protein CPE0402 516217 - 516828 + | hypothetical protein TERM 802 517063 - 517051 - g 73 -3.5 -5.28778 | ATGAGTGACAAAAAA TTATT CAC AATAA AGACATCTATAAATA CPE0403 517036 - 517572 + | hypothetical protein TERM 803 517592 - 517646 + F 90 -6.4 -5.65678 | opp_overlap 517583 517592, overlap 517645 TTAAAATATAAGCTA TAAAAGGT-ATGTATGAAAATATAGT AATAA ACT-TATTTTTATATATTACCTTTTA TTTTTTATATTTTAT TERM 804 518143 - 518171 + F 100 -11 -5.93252 | opp_overlap 518145, overlap 518145 GTGGTAACGCGATTA AACCTCGTCCCT TTTAT AGGGACGGGGTA TTTTTTATTTTTAAA TERM 805 518169 - 518145 - f 95 -11.4 -3.76492 | opp_overlap 518143 518145 GGTAACGCGATTAAA CCTCGTCCCT TTTAT AGGGACGGGG TATTTTTTATTTTTA TERM 806 518145 - 518169 + F 100 -13.6 -4.585 | opp_overlap 518145, overlap 518143 GGTAACGCGATTAAA CCTCGTCCCT TTTAT AGGGACGGGG TATTTTTTATTTTTA TERM 807 518276 - 518252 - f 83 -7.4 -5.04356 | opp_overlap 518252 TTAAATAATTAAAAA CTATATTTTT ACGGA AAAAATATAG TTAATAAAAAAGAAA brnQ 518306 - 519643 + | branched chain amino acid ABC transporter carrier protein CPE0405 519899 - 520771 + | hypothetical protein TERM 808 521019 - 521005 - g 82 -4.3 -5.65177 | opp_overlap 521005 AGAGCTATAAAAAAA TATCC TTTAG GGATA GTTTTTTGTAATAAT CPE0406 520903 - 522249 + | putative reticuline oxidase TERM 809 522362 - 522308 - f 85 -8.5 -4.60302 | gap 2, opp_overlap 522322, overlap 522311 522322 ATAGAAATAAAATAA TATTATATAAAGAAGCATAGAGAACTT AAA AAGTTTTCTATGCTT-TTTACAT-ATA TGCATTAATTTTAAG TERM 810 522360 - 522311 - f 91 -12.7 -2.90316 | gap 1, opp_overlap 522322, overlap 522308 522322 GAAATAAAATAATAT TATATAAAGAAGCATAGAGAACTT AAA AAGTTTTCTATGCTT-TTTACATA TATGCATTAATTTTA TERM 811 522350 - 522322 - f 100 -11.9 -4.17416 | opp_overlap 522322, overlap 522311 522308 ATATTATATAAAGAA GCATAGAGAACTT AAA AAGTTTTCTATGC TTTTTACATATATGC TERM 812 522322 - 522350 + F 100 -14.1 -4.72846 | opp_overlap 522322 522311 522308 ATATTATATAAAGAA GCATAGAGAACTT AAA AAGTTTTCTATGC TTTTTACATATATGC TERM 813 522598 - 522588 - g 82 -4 -5.5454 | opp_overlap 522588 TTAAATAAAGAAAAA TATG ACT CATA TTTTGATAATACATT CPE0407 522549 - 522902 + | hypothetical protein TERM 814 522923 - 522947 + F 76 -4.4 -5.39721 | opp_overlap 522923 GCTAAAGCCTAAAAG CATAGAATTT TCAAT AATTTCTATG TTTTTTATATAATCA TERM 815 523493 - 523482 - g 70 -4.4 -4.87133 | overlap 523468 AGGTCTTAAATAAAA CCTT ACCT AAGG ATAAACAAGTGAGAT CPE0408 523097 - 523921 + | hypothetical protein TERM 816 525468 - 525453 - g 78 -4 -5.42975 | opp_overlap 525466, overlap 525455 TGATATAAATAAAAA TAGTGA AGGT TCACCA GTAATTGGTTTTAAG CPE0409 524071 - 525504 + | hypothetical protein CPE0410 525713 - 526912 + | transposase TERM 817 527845 - 527827 - g 79 -8.2 -3.90943 | overlap 527821 TAAATTAAATCCAAA TACAACTG GTC CAGCTGTA GATGAAAATTTAGAA CPE0411 527033 - 527965 + | monooxygenase TERM 818 528015 - 527969 - f 70 -4.9 -4.78752 | gap 1, opp_overlap 527968, overlap 527970 ACTATAAGTTAAAAA TTATATTCCTATTTTA-TATGT TAAA AGATATTAAAATAGGAATATAG ATCATATATTAAATC TERM 819 528014 - 527970 - f 74 -8.4 -3.46167 | gap 1, opp_overlap 527968, overlap 527969 CTATAAGTTAAAAAT TATATTCCTATTTTA-TATGT TAAA AGATATTAAAATAGGAATATA GATCATATATTAAAT TERM 820 528084 - 528119 + F 78 -8.6 -3.96051 | TATAAAACAAAGAAA TTAACTTTACTGAAAT TTAA ATTTTGGTAGAGTTAA TTTGCTATATTATGT CPE0412 528206 - 528583 + | hypothetical protein TERM 821 528667 - 528694 + F 84 -5 -5.71712 | opp_overlap 528678, overlap 528669 528671 GAGAGAATTTTTAAG TGGGTTTAAAGT AAAG ACTTTAAATCAA TTTTTTTATATAAAA CPE0413 528800 - 529372 + | carbonic anhydrase TERM 822 529389 - 529417 + F 100 -7.6 -5.41746 | opp_overlap 529389 ATAAAAATTAAAAAA CACTTACTTTAA TTTAT TTAAAGCAAGTG TTTTTTTGGAGGGTT TERM 823 529417 - 529389 - f 100 -9.8 -5.56112 | opp_overlap 529389 ATAAAAATTAAAAAA CACTTACTTTAA TTTAT TTAAAGCAAGTG TTTTTTTGGAGGGTT CPE0414 529513 - 530151 + | hypothetical protein TERM 824 530264 - 530252 - g 70 -6.3 -4.18802 | ATATATATTGCAAAA CTTGT TCA ACAAG AACTATGGGAACTTT CPE0415 530176 - 530565 + | hypothetical protein TERM 825 532607 - 532591 - g 70 -3.8 -5.04325 | GTTAAAGCACAAAAA GTATTA GAAGT TAATAC AAATCATGAAGTATT htpG 530899 - 532770 + | heat shock protein 90 TERM 826 532775 - 532827 + F 100 -12.3 -4.67353 | overlap 532777 532778 TAATGAAATAATTTT AACTTGAGGTACATCGAAAGGTTTA ATA TTAACTTTTTGATGTACCTCAAATA TTTTTAAATAAATAC TERM 827 532777 - 532825 + F 100 -14.9 -3.95214 | overlap 532775 532778 ATGAAATAATTTTAA CTTGAGGTACATCGAAAGGTTTA ATA TTAACTTTTTGATGTACCTCAAA TATTTTTAAATAAAT TERM 828 532778 - 532824 + F 100 -18.4 -2.96405 | overlap 532777 532775 TGAAATAATTTTAAC TTGAGGTACATCGAAAGGTTTA ATA TTAACTTTTTGATGTACCTCAA ATATTTTTAAATAAA CPE0417 532934 - 533926 + | LacI family transcriptional regulator TERM 829 534164 - 534149 - f 70 -7.6 -3.31501 | AGTAATTCTTGATAA CAGCTT GAAT AAGCTG GAATCTTAGAATTGA TERM 830 534252 - 534281 + F 85 -5.9 -5.61824 | opp_overlap 534252 534278, overlap 534254 534268 AGCCTTATTTTAAAA TCTGTTTTTTAGG TGAT TCTAAAAAACAAA TTTTTTTGAATTTTG TERM 831 534281 - 534252 - f 73 -7.4 -4.13945 | opp_overlap 534252 534254 534268, overlap 534278 AGCCTTATTTTAAAA TCTGTTTTTTAG GTGATT CTAAAAAACAAA TTTTTTTGAATTTTG TERM 832 534254 - 534279 + F 71 -8.5 -2.94352 | opp_overlap 534252 534278, overlap 534252 534268 CCTTATTTTAAAATC TGTTTTTTAGG TGAT TCTAAAAAACA AATTTTTTTGAATTT TERM 833 534286 - 534321 + F 70 -7 -3.67864 | opp_overlap 534278, overlap 534268 534317 TAAAAAACAAATTTT TTTGAATTTTGGGCGA ACGT TTGCACAAAGTTCGAA TTTAAAATTCAATTA TERM 834 535930 - 535919 - g 74 -3 -5.40464 | TATGAGAAAGAAAAA CTTA ATTC TAAG GATTTAATTCTTAAC CPE0418 534362 - 536026 + | exo-alpha-1,4-glucosidase CPE0419 536285 - 537940 + | PTS system, IIBC component TERM 835 538183 - 538151 - g 100 -12.2 -4.70117 | opp_overlap 538155 538182, overlap 538155 AATTGAAGAAATAAA CAAACTAGGTGG AGAAAAATA CCACCTAGTTTG GGATTACTCTCATAT TERM 836 538179 - 538155 - g 85 -7.2 -4.86861 | opp_overlap 538155, overlap 538151 GAAGAAATAAACAAA CTAGGTGG AGAAAAATA CCACCTAG TTTGGGATTACTCTC CPE0420 537951 - 538742 + | endonuclease/exonuclease/phosphatase family protein TERM 837 538805 - 538772 - f 100 -14.2 -4.17958 | opp_overlap 538772 AATAGTTTTAAGAAA GATAGTACAAGTAA TAAAAG TTACTTGTACTATC TTTGTTTTTAAGAGG TERM 838 538772 - 538805 + F 100 -14.9 -4.85782 | opp_overlap 538772 AATAGTTTTAAGAAA GATAGTACAAGTAAT AAAA GTTACTTGTACTATC TTTGTTTTTAAGAGG TERM 839 538962 - 538980 + F 78 -7.6 -4.2558 | opp_overlap 538962 AGTTTTCTTTGAAAA TTTGTATT AAA AATACAAA TTTTAATAAAAAATA TERM 840 538980 - 538962 - f 77 -7.6 -4.07687 | opp_overlap 538962 AGTTTTCTTTGAAAA TTTGTATT AAA AATACAAA TTTTAATAAAAAATA TERM 841 539180 - 539207 + F 91 -8.6 -4.94811 | opp_overlap 539180 AGATGTTGAGAGAAA GTTCAACTTAAA ATTA TTTAGGTTGAGC TTTATTTATTTTTAG glpQ 539283 - 540020 + | glycerophosphodiester phosphodiesterase CPE0422 540117 - 541403 + | hypothetical protein pcrA 541903 - 544515 + | ATP-dependent DNA helicase trmB 544692 - 545351 + | tRNA (guanine-N(7))-methyltransferase TERM 842 545409 - 545446 + T 100 -13.8 -5.30686 | opp_overlap 545411 545416 545418, overlap 545411 TTAAAATATTTAGCA TAGTAGATAGTTTTGT TTTTAC ACAAAACTATCTACTG TTTTTTATGAATATT TERM 843 545444 - 545411 - T 100 -14.2 -2.84103 | opp_overlap 545409 545411, overlap 545416 545418 AAAATATTTAGCATA GTAGATAGTTTTGT TTTTAC ACAAAACTATCTAC TGTTTTTTATGAATA TERM 844 545411 - 545444 + T 100 -14.2 -4.2748 | opp_overlap 545411 545416 545418, overlap 545409 AAAATATTTAGCATA GTAGATAGTTTTGT TTTTAC ACAAAACTATCTAC TGTTTTTTATGAATA CPE0425 546364 - 545510 - | hypothetical protein CPE0426 546981 - 548264 + | hypothetical protein TERM 845 548300 - 548320 + F 79 -9.9 -2.69977 | opp_overlap 548305, overlap 548305 TAATTAGTGGTTATT TTAAAGAGT TAT ACTCTTTAA TACTATCTCCAGTGT CPE0427 548732 - 549310 + | hypothetical protein CPE0428 549541 - 549696 + | hypothetical protein TERM 846 550021 - 550050 + F 90 -7.4 -5.28561 | gap 1 TATATATATGCATTT GTCCTATAAG-TA TCCCT TAGCTTATAGGAC TTTTTGTTATATATT CPE0429 550064 - 550615 + | hypothetical protein TERM 847 550645 - 550685 + T 86 -12.3 -2.53876 | opp_overlap 550645 550672, overlap 550647 AGATGTTTTAAGTTA TTGTTGATTTTTAACTAAT TTT ATTAATTGAAAATCAACAA TAGCTTAAAATAGAG TERM 848 550685 - 550645 - T 86 -12.3 -2.53015 | opp_overlap 550645 550647, overlap 550672 AGATGTTTTAAGTTA TTGTTGATTTTTAACTAAT TTT ATTAATTGAAAATCAACAA TAGCTTAAAATAGAG sipS 551245 - 550703 - | type I signal peptidase TERM 849 551592 - 551574 - g 74 -5.3 -4.9218 | opp_overlap 551574 551582 551585 TATTTACTAGAAAAA CCCCTAA TTCCT TTAGAGG ATTTAAAATTTTACA TERM 850 551677 - 551667 - g 72 -2.6 -5.36441 | GGCTTATAGAAAAAA TAAA TTC TTTA AAACCAGATATTATT TERM 851 551720 - 551733 + G 86 -5.3 -5.55855 | AATATGTTAACTTCA TCCTT AGAT AAGGA TTTTGTTTTTTTAGA CPE0431 551453 - 552295 + | hypothetical protein CPE0432 552580 - 553419 + | hydrolase, alpha/beta fold family TERM 852 554592 - 554582 - g 72 -4 -5.09521 | TGAAGAAATTAAAAA TCTT GAA AAGA AAGACTACTCAGCCT TERM 853 554726 - 554708 - g 72 -7.6 -3.5756 | AGAAGAAGAGTATAA TGATATAA GAG TTATATCA AAGGATGTTATTTTA CPE0433 553503 - 554798 + | hypothetical protein TERM 854 554890 - 554933 + F 100 -9.2 -5.40625 | opp_overlap 554893, overlap 554893 ATATAGAAAAGTATT AAAGTCATATTAAAACTTTT ATTT AAGGGTTTTAATATGGCTTA TTTTTTATCTAATAT TERM 855 554893 - 554930 + F 100 -10.9 -4.77122 | opp_overlap 554893, overlap 554890 TAGAAAAGTATTAAA GTCATATTAAAACTTTT ATTT AAGGGTTTTAATATGGC TTATTTTTTATCTAA CPE0434 555174 - 555662 + | GNAT family acetyltransferase TERM 856 555715 - 555675 - T 90 -6.4 -5.68023 | gap 1, opp_overlap 555675 TGATAATTAAAAAAA CTCATTCCAA-AAAAATCT TAAA AGATTTAGATTGGAATGAG TTTTTTTATTTTTTA TERM 857 555675 - 555715 + T 100 -6.4 -6.28401 | gap 1, opp_overlap 555675 TGATAATTAAAAAAA CTCATTCCAA-AAAAATCT TAAA AGATTTAGATTGGAATGAG TTTTTTTATTTTTTA CPE0435 556056 - 555721 - | hypothetical protein TERM 858 556000 - 555942 - G 71 -8.8 -2.81208 | gap 1, overlap 555944 TTTGATCTAAAAGAC TATT-TATATTTGATACTAACTTTAAA ACTTTG TTTAATGTTAGTATCAAATAAACAATA GCCACACAACCTAAT TERM 859 555997 - 555944 - G 72 -8.6 -2.95081 | overlap 555942 TGATCTAAAAGACTA TTTATATTTGATACTAACTTTAAA ACTTTG TTTAATGTTAGTATCAAATAAACA ATAGCCACACAACCT CPE0436 556478 - 556062 - | hypothetical protein TERM 860 557845 - 557831 - g 70 -6.4 -4.19258 | opp_overlap 557831 ATACTTTATTTAAAA GACTTC TTT GAAGCC GTTGTAAAGGTTGGA hlyB 557024 - 558361 + | hemolysin TERM 861 558370 - 558409 + F 75 -7.2 -4.29326 | opp_overlap 558364 558371 558376, overlap 558376 CAATTAAAATTATAA ATAATAGGGCAATGAGCT AATA AGTTCATTGCCCTTTAAG TTTATTAAATTTAGA TERM 862 558407 - 558371 - f 95 -10.4 -4.2331 | gap 1, opp_overlap 558370 558376, overlap 558364 558376 AATTAAAATTATAAA TAATAGGGCAATGAGCT AATA AGTTCATTGCCCT-TTA AGTTTATTAAATTTA TERM 863 558376 - 558403 + F 100 -15 -3.93262 | opp_overlap 558376 558371 558364, overlap 558370 AAATTATAAATAATA GGGCAATGAGCT AATA AGTTCATTGCCC TTTAAGTTTATTAAA TERM 864 558403 - 558376 - f 95 -12.8 -3.67393 | opp_overlap 558370 558376, overlap 558371 558364 AAATTATAAATAATA GGGCAATGAGCT AATA AGTTCATTGCCC TTTAAGTTTATTAAA TERM 865 558902 - 558917 + G 78 -6.2 -4.74706 | opp_overlap 558902 AAGAGAAGGAGATAA TACATC TGCT GATGTA TTTTTAACTGTTGGA CPE0438 558636 - 559688 + | ion-uptake ABC transporter TERM 866 559725 - 559751 + G 100 -15.4 -3.25223 | opp_overlap 559728 559731, overlap 559731 GATGGGCACTTTTAA GTACAATCATCA GTT TGATGATTGTAC TTCCTAATATAGATA TERM 867 559748 - 559728 - g 85 -11.3 -2.72344 | opp_overlap 559725 559731, overlap 559731 GGGCACTTTTAAGTA CAATCATCA GTT TGATGATTG TACTTCCTAATATAG TERM 868 559928 - 559942 + G 72 -4.3 -5.09225 | ATATCTGCCTATGAT TTTCC ATTTA GGAAA TTTTTTAGATGGGCT CPE0439 559688 - 561280 + | iron-uptake ABC transporter CPE0440 561283 - 561963 + | ABC transporter TERM 869 562064 - 562007 - f 74 -6.1 -4.59109 | gap 1, opp_overlap 562007 562012 562060 562062 GATATTGGTGAAAAA TTAAAGGTGTGAATTAAAAATAAGTTTT ATT AAAATTTATTTTCA-TTCATACCTTTTA TTTTTAAAATAATAT TERM 870 562007 - 562064 + F 85 -8.3 -4.63928 | gap 1, opp_overlap 562007, overlap 562012 562060 562062 GATATTGGTGAAAAA TTAAAGGTGTGAATTAAAAATAAGTTTT ATT AAAATTTATTTTCA-TTCATACCTTTTA TTTTTAAAATAATAT TERM 871 562012 - 562059 + F 95 -8.2 -5.27023 | gap 1, opp_overlap 562007, overlap 562007 TGGTGAAAAATTAAA GGTGTGAATTAAAAATAAGTTTT ATT AAAATTTATTTTCA-TTCATACC TTTTATTTTTAAAAT CPE0441 562253 - 562942 + | hypothetical protein CPE0442 563132 - 563305 + | BFD-like iron-sulfur cluster-binding protein TERM 872 563348 - 563315 - f 71 -6.7 -4.18167 | opp_overlap 563320, overlap 563320 AAATAATTATATAAA CCTAAGAGGTGCACA TGTA TGTGCACCTCTTTTT TGTGTTTTAAGACAA TERM 873 563320 - 563343 + F 100 -15.4 -5.63645 | opp_overlap 563315 563320 ATTATATAAACCTAA GAGGTGCACA TGTA TGTGCACCTC TTTTTTGTGTTTTAA TERM 874 563343 - 563320 - f 100 -15.4 -3.36096 | opp_overlap 563320, overlap 563315 ATTATATAAACCTAA GAGGTGCACA TGTA TGTGCACCTC TTTTTTGTGTTTTAA TERM 875 563439 - 563395 - f 91 -10.3 -3.5754 | opp_overlap 563400 563437, overlap 563391 AAATATTTAAATTAA TTTTAGCTATGTATTAAAAAG AAG CTTTTTAATACATAGCTTTTA TTTTATAAGTTTTTT TERM 876 563400 - 563434 + F 100 -19 -5.19275 | opp_overlap 563395 563391 TTTAAATTAATTTTA GCTATGTATTAAAAAG AAG CTTTTTAATACATAGC TTTTATTTTATAAGT TERM 877 563562 - 563518 - f 100 -14.7 -3.73414 | opp_overlap 563505 563529, overlap 563520 GACACTATATGGAAA TAGTGTATATACTGTATATAT AGA ATATATACAGTATATACACGG AAAGAGGTGAGTTTT TERM 878 563560 - 563520 - f 100 -21.7 -3.44487 | opp_overlap 563505 563529, overlap 563518 CACTATATGGAAATA GTGTATATACTGTATATAT AGA ATATATACAGTATATACAC GGAAAGAGGTGAGTT TERM 879 563529 - 563551 + F 82 -10.8 -2.87132 | opp_overlap 563520 563518 GAAATAGTGTATATA CTGTATATAT AGA ATATATACAG TATATACACGGAAAG TERM 880 563707 - 563695 - g 72 -7.7 -3.63991 | overlap 563698 563699 CATTACCGTCAATAA GAAGC TTA GCTTC TGAGCTTAGAGTAAG CPE0443 563577 - 563948 + | GntR family transcriptional regulator CPE0444 563982 - 564845 + | ABC transporter TERM 881 565252 - 565272 + G 71 -5.5 -4.41206 | opp_overlap 565254 565256, overlap 565254 565256 CTAACTTTACCAGTA TATATGACT ATA AGTCATAAA TTTTATAGAGTGGTT CPE0445 564847 - 565473 + | hypothetical protein CPE0446 565475 - 566116 + | hypothetical protein lguL 566258 - 566638 + | lactoylglutathione lyase CPE0448 567633 - 566776 - | transcriptional regulator adh 567822 - 568970 + | alcohol dehydrogenase TERM 882 569067 - 569090 + F 100 -11.8 -5.18561 | opp_overlap 569065 TTTCATAATATATGG GCAACAAGGC TTAG GCTTTGTTGC TTTTTTAAGTCTTTG TERM 883 569341 - 569324 - f 81 -7.1 -4.87133 | AGTGTTTAAAGAAAA TCTAAGT GTGT ACTTAGA AGCGAAAACCAAGCA CPE0450 569554 - 569877 + | hypothetical protein CPE0451 569990 - 570382 + | hypothetical protein TERM 884 570395 - 570369 - f 100 -15.4 -3.889 | opp_overlap 570369 TTGAATTATATGAAA TCACATGTAACT AAA AGTTACATGTGA TTTTTTTGTTAAAAT TERM 885 570369 - 570395 + F 100 -15.4 -5.80364 | opp_overlap 570369 TTGAATTATATGAAA TCACATGTAACT AAA AGTTACATGTGA TTTTTTTGTTAAAAT TERM 886 570873 - 570863 - g 70 -4 -4.91084 | TAGCTAATAATAAAA TTTC AGT GAAA AAAGTTAATGGAGAA TERM 887 571843 - 571825 - g 81 -6 -5.25772 | AAACTAGAAGAAAAA CAAGAGGT TAA ACCTGTTG AAGCTTCAGAAGAAA entC 570703 - 572580 + | enterotoxin TERM 888 572595 - 572626 + T 73 -2.3 -5.71638 | opp_overlap 572598, overlap 572597 572598 AAGTTAAATTTAATC AAAGGAGTTTTGT GTAAAA ACAAGACTCCCTA TTTTTTTAGTTATTA TERM 889 572598 - 572623 + T 72 -8.4 -3.25657 | opp_overlap 572598, overlap 572597 572595 TTAAATTTAATCAAA GGAGTTTTGT GTAAAA ACAAGACTCC CTATTTTTTTAGTTA CPE0453 573583 - 572798 - | MerR family transcriptional regulator TERM 890 572824 - 572836 + g 71 -7.7 -3.39784 | opp_overlap 572823, overlap 572822 TTTGAAATTGAAATT CTTCC TTT GGAAG TGTTGTTAGGACTAA TERM 891 573619 - 573635 + H 71 -8.1 -2.99273 | overlap 573618 573632 TAAAAAAGTCTTTAC TCTAGTA TTA TACTAGA ATTTATAATACTAAG TERM 892 573632 - 573664 + H 95 -11.7 -3.34895 | opp_overlap 573637, overlap 573619 573618 573637 ACTCTAGTATTATAC TAGAATTTATAATAC TAA GTATTATAAATTTTA TTAATTAAAGATAAG TERM 893 573637 - 573659 + H 95 -9.4 -4.78572 | opp_overlap 573637, overlap 573632 AGTATTATACTAGAA TTTATAATAC TAA GTATTATAAA TTTTATTAATTAAAG TERM 894 573659 - 573637 - H 83 -9.4 -3.48668 | opp_overlap 573637 573632 AGTATTATACTAGAA TTTATAATAC TAA GTATTATAAA TTTTATTAATTAAAG TERM 895 574636 - 574622 - g 70 -4.4 -4.9725 | ACTTTTAGAGAAAAA TATAAA TAA TTTATA TGAATATAGGAGGAA CPE0454 573696 - 575516 + | hypothetical protein TERM 896 575658 - 575606 - f 73 -3 -5.79588 | gap 1, opp_overlap 575612 575616 575652, overlap 575608 575612 CTAAAATCAAAAAAA TATTAAGAAACTCTTTAGA-AAATC TTTA GATTTATCTGAGGAGTTTCTTTATT TTTAAAGTTTATTAT TERM 897 575612 - 575652 + F 100 -10.8 -4.88293 | gap 1, opp_overlap 575608 575606 575612, overlap 575616 TCAAAAAAATATTAA GAAACTCTTTAGA-AAATC TTTA GATTTATCTGAGGAGTTTC TTTATTTTTAAAGTT TERM 898 575616 - 575648 + F 75 -5.8 -4.94811 | gap 1, opp_overlap 575612 575608 575606, overlap 575612 AAAAATATTAAGAAA CTCTTTAGA-AAATC TTTA GATTTATCTGAGGAG TTTCTTTATTTTTAA CPE0455 575822 - 576331 + | alkaline phosphatase-like protein CPE0456 576404 - 577036 + | hypothetical protein CPE0457 577266 - 577970 + | DNA-binding response regulator TERM 899 578250 - 578224 - g 72 -6.1 -4.22407 | gap 1, opp_overlap 578228 578232, overlap 578228 GAGGAAAATGACAAA GAACTAAATCCT ATAG AGGATTTA-TTC ACTTTAAAAAGGGAA TERM 900 578744 - 578759 + G 72 -6.8 -4.04295 | opp_overlap 578735 AGATTATGGCACTTG GGAGTG CTAG CGCTCC TTTCATTATGATTGG TERM 901 579996 - 579978 - g 77 -4.7 -5.31275 | TGTTATCATAAAAAA TATTTCA GCAGA TGAAATA ACCTTTAATATTAAT CPE0458 577945 - 580176 + | sensor histidine kinase TERM 902 580479 - 580515 + F 79 -3.8 -5.71712 | opp_overlap 580481, overlap 580481 AATAAAGTAATGAAT AAGGGTTCAAAGTAAT AAAAA AATGCTTTGAACTCTA TTTTTTTATATAAAA TERM 903 580481 - 580513 + F 75 -6.4 -4.50122 | opp_overlap 580481, overlap 580479 TAAAGTAATGAATAA GGGTTCAAAGTAAT AAAAA AATGCTTTGAACTC TATTTTTTTATATAA TERM 904 580649 - 580630 - g 76 -3.6 -5.47914 | opp_overlap 580630, overlap 580642 AAAAAGTATAAAAAA GAATCTAA AACC TAAGATTC TTATAAGTAATTTAA CPE0459 580610 - 580855 + | hypothetical protein TERM 905 580943 - 580954 + F 71 -5.8 -4.67256 | opp_overlap 580943 TGCTATGGAAACAAA GGCA TATT TGCC TTTTATACTTTGTTA CPE0460 580950 - 581645 + | hypothetical protein TERM 906 581998 - 582014 + F 75 -5.3 -5.00388 | opp_overlap 581995 581998 582011 TTTATTTATATATTA TTTATTT GTT AAATAAA TTTATTTTTAGTTTA TERM 907 582997 - 582973 - g 70 -4.3 -4.97159 | AAAAACAAAAAAGAA CTAGAAAAGAT TTT ACCTATTCCAG TAATAGGGGAAATAC CPE0461 582364 - 583026 + | capsular polysaccharide biosynthesis protein CPE0462 583049 - 583726 + | capsular polysaccharide biosynthesis protein TERM 908 584938 - 584920 - g 71 -4.7 -4.77759 | AGAAGCGATTAAAAA TAATGTT ATTGG AACATTA AATGTTGCAGAATGT TERM 909 585395 - 585381 - g 71 -5.6 -4.36378 | overlap 585383 TAAAAATAGAAATAA CAGGTC TTA GACCAG GTGAAAAATTATACG CPE0463 583751 - 585664 + | capsular polysaccharide biosynthesis protein CPE0464 585795 - 586937 + | spore coat polysaccharide biosynthesis protein TERM 910 588145 - 588130 - g 71 -4.8 -4.75934 | opp_overlap 588133, overlap 588132 TAAAAAATAAAATAA GATTTT TGAC AAAATC AGTTACTGTGTCAAA CPE0465 586974 - 588206 + | hypothetical protein TERM 911 588289 - 588276 - g 74 -2.4 -5.59564 | opp_overlap 588276, overlap 588267 AGAAAGTGAAAAAAA GAAC TATACG GTTC CTTTTTCAAAGATAT CPE0466 588224 - 588637 + | hypothetical protein CPE0467 588699 - 589616 + | hypothetical protein CPE0468 589646 - 589933 + | hypothetical protein CPE0469 589908 - 590363 + | hypothetical protein TERM 912 590410 - 590396 - f 73 -4.4 -5.1356 | opp_overlap 590377 GTTGATTAATAAAAA TATTAT TAA ATAATA AAACTTTTTATAGTT CPE0470 590494 - 590679 + | hypothetical protein CPE0471 590799 - 591017 + | hypothetical protein TERM 913 591033 - 591053 + T 100 -12.7 -5.98781 | opp_overlap 591033 TAATTAATAAAAAAA CCAATGACT TTA AGTCATTGG TTTTTTTTGCTTATA TERM 914 591053 - 591033 - T 100 -12.7 -5.87996 | opp_overlap 591033 TAATTAATAAAAAAA CCAATGACT TTA AGTCATTGG TTTTTTTTGCTTATA CPE0472 592935 - 591064 - | ABC transporter TERM 915 593178 - 593147 - H 72 -7.6 -3.6318 | opp_overlap 593147, overlap 593146 593150 AAATGTTGAAAAAAG TCATTAAATTTTAA GAGA TTAAAATTTAAGGA TTTTATAAATACCAG TERM 916 593147 - 593178 + H 81 -7.6 -4.42386 | opp_overlap 593146 593147 593150 AAATGTTGAAAAAAG TCATTAAATTTTAA GAGA TTAAAATTTAAGGA TTTTATAAATACCAG CPE0473 593436 - 594053 + | UDP-galactose phosphate transferase cysE 594105 - 594743 + | serine O-acetyltransferase TERM 917 595550 - 595538 - gf 77 -4.9 -5.20216 | TAGAGGATTAAAAAA TAACT TTA AGTTA TTAGGATTTAGAACA CPE0475 594774 - 595931 + | capsular polysaccharide biosynthesis protein TERM 918 596785 - 596771 - gf 72 -2.8 -5.47218 | TGGCATTTAAAAAAA CAATAG TAT CTATGG ATGTAGGAAGCATTG CPE0476 595897 - 597003 + | capsular polysaccharide biosynthesis protein CPE0477 597023 - 597907 + | beta-glycosyltransferase CPE0478 597933 - 599000 + | capsular polysaccharide biosynthesis protein CPE0479 599019 - 600128 + | capsular polysaccharide biosynthesis protein CPE0480 600146 - 601336 + | capsular polysaccharide biosynthsis protein CPE0481 601394 - 602422 + | beta-1,4-galactosyltransferase CPE0482 602440 - 603594 + | glycero-phosphotransferase CPE0483 603657 - 604079 + | glycerol-3-phosphate cytidyltransferase CPE0484 604095 - 605087 + | capsular polysaccharide biosynthsis protein CPE0485 605106 - 606296 + | capsular polysaccharide biosynthsis protein TERM 919 606343 - 606327 - g 74 -2.4 -5.56568 | overlap 606330 606332 ATATTATGAAAAAAA TATTAT TTATG ATAATA AACATGAATATAGGT TERM 920 606569 - 606589 + G 72 -2.7 -5.46657 | opp_overlap 606569 ATAAAAGATAAATCA TATATAAAA GCT TTTAATATA TTTTTTCTTACACTA TERM 921 607212 - 607195 - g 75 -7.1 -4.08958 | AGGTTCAAATAATAA TCCATAT AAGT ATATGGA AGAATGTGATATTTA CPE0486 606317 - 607504 + | galactosyl transferase TERM 922 608130 - 608147 + G 77 -5.5 -4.87665 | opp_overlap 608130 608133, overlap 608133 GAGATTCATCAAAAA CAAGACC GGGA GGTCGTG TTTTTGTAGATAAAG TERM 923 608147 - 608130 - g 75 -5.5 -4.76041 | opp_overlap 608130 608133, overlap 608133 GAGATTCATCAAAAA CAAGACC GGGA GGTCGTG TTTTTGTAGATAAAG TERM 924 608144 - 608133 - g 71 -5.8 -4.4831 | opp_overlap 608133 608130, overlap 608130 ATTCATCAAAAACAA GACC GGGA GGTC GTGTTTTTGTAGATA CPE0487 607514 - 608437 + | hypothetical protein CPE0488 608456 - 609622 + | capsular polysaccharide biosynthsis protein CPE0489 609639 - 611177 + | flippase CPE0490 611190 - 612995 + | hypothetical protein TERM 925 613108 - 613085 - f 87 -9.8 -3.40522 | opp_overlap 613085 ATTGTTTTATGATAA GTCTATATAA GAAA TTATATAGAC TTTTATTTATTTGTT TERM 926 613085 - 613108 + F 100 -9.8 -5.24515 | opp_overlap 613085 ATTGTTTTATGATAA GTCTATATAA GAAA TTATATAGAC TTTTATTTATTTGTT TERM 927 613647 - 613629 - f 78 -6.2 -5.00884 | opp_overlap 613610 613629, overlap 613644 ATTTTTGTTAAAAAA TTTATTTA AAC TAAATAAA TTAAATTTAAAATTT TERM 928 613664 - 613648 - f 71 -5.3 -4.62772 | overlap 613644 613653 TTTAAACTAAATAAA TTAAATT TAA AATTTAA AAAAATGGTTTGTTA TERM 929 613684 - 613670 - f 70 -2.8 -5.61824 | TAAAATTTAAAAAAA TGGTTT GTT AATCCA GGTGGGAATTTTATA CPE0491 613798 - 614496 + | capsular polysaccharide biosynthsis protein CPE0492 614510 - 615163 + | capsular polysaccharide biosynthsis protein TERM 930 615208 - 615176 - f 100 -13 -4.99568 | gap 1, opp_overlap 615176 615172 615179 TAATATTAAATAAAA CAACTTAACACTCCT AGTA AGGAGTG-TAAGTTG TCAATTATTATGTAA TERM 931 615176 - 615208 + F 90 -13 -2.70263 | gap 1, opp_overlap 615176, overlap 615172 615179 TAATATTAAATAAAA CAACTTAACACTCCT AGTA AGGAGTG-TAAGTTG TCAATTATTATGTAA TERM 932 615179 - 615205 + F 79 -8.9 -3.48822 | gap 1, opp_overlap 615176, overlap 615176 615172 TATTAAATAAAACAA CTTAACACTCCT AGTA AGGAGTG-TAAG TTGTCAATTATTATG CPE0493 615362 - 616030 + | capsular polysaccharide biosynthsis protein TERM 933 617321 - 617311 - g 70 -4 -4.89339 | AAGGATGTAGAAAAA TCAA ATG TTGA ATATCATTCAGTAGG CPE0494 616051 - 617397 + | NDP-suger dehydrogenase CPE0495 617414 - 618460 + | mannose-1-phosphate guanylyltransferase TERM 934 618757 - 618728 - g 70 -5.9 -4.29929 | gap 1, opp_overlap 618751 AGGAAATCCAATAAA GGAAAAAATATCAG GAT CAGAT-TTTTTTCC AAAACTTTGTGAAAG CPE0496 618495 - 619220 + | N-acetyl-mannosamine transferase TERM 935 619564 - 619548 - g 83 -2.3 -5.88471 | overlap 619552 TATTAGGAAAAAAAA GAAATAT AAG ATATATC AATACTTGCCATAAC TERM 936 619562 - 619552 - g 72 -2.6 -5.36018 | overlap 619548 AGGAAAAAAAAGAAA TATA AGA TATA TCAATACTTGCCATA CPE0497 619235 - 619669 + | hypothetical protein CPE0498 619663 - 620319 + | hexosyltransferase TERM 937 620646 - 620626 - g 88 -4.1 -5.79526 | ATATGGTAAAAAAAA CAATAAAAA AGT TATTTATTG GACTGAAAAGTGGGA CPE0499 620321 - 621448 + | hexosyltransferase TERM 938 621941 - 621929 - g 90 -3.5 -6.21477 | opp_overlap 621936 621940, overlap 621936 AAGATGAAAAAAAAA TAAAT ATT ATTTA TAAAATATATTTAAA CPE0500 621466 - 622695 + | hexosyltransferase CPE0501 622784 - 623764 + | capsular polysaccharide biosynthsis protein CPE0502 623775 - 624878 + | lipopolysaccharide biosynthesis protein CPE0503 624883 - 626367 + | hypothetical protein TERM 939 626600 - 626590 - gf 70 -4 -4.9645 | overlap 626597 ATTAGAACAAGAAAA TAGA GGA TCTA GTGAAGCTAGAAAAA TERM 940 626806 - 626779 - gf 76 -2.9 -5.58209 | TGAAATTCAAAAAAA TTCATTATTAT ATGATA AAAATAATGAA AAAATAGAATTAAGA CPE0504 626387 - 627433 + | spore coat polysaccharide biosynthesis protein CPE0505 627408 - 628928 + | flippase galF 629121 - 630041 + | UTP-glucose-1-phosphate uridylyltransferase TERM 941 630091 - 630052 - f 70 -8 -3.38326 | opp_overlap 630057, overlap 630054 630056 630057 TATAATTTCAATTAA TAGAGTCCAGTAGAGAAT TTAA ATTCTCTACTGGATTTTT TATATTTAATAAAAG TERM 942 630089 - 630054 - f 87 -10.6 -3.25539 | opp_overlap 630057, overlap 630052 630056 630057 TAATTTCAATTAATA GAGTCCAGTAGAGAAT TTAA ATTCTCTACTGGATTT TTTATATTTAATAAA TERM 943 630087 - 630056 - f 100 -13.2 -3.18634 | opp_overlap 630057, overlap 630054 630052 630057 ATTTCAATTAATAGA GTCCAGTAGAGAAT TTAA ATTCTCTACTGGAT TTTTTATATTTAATA TERM 944 630057 - 630086 + F 100 -16.7 -5.5762 | opp_overlap 630056 630054 630052 630057 TTTCAATTAATAGAG TCCAGTAGAGAAT TTAA ATTCTCTACTGGA TTTTTTATATTTAAT TERM 945 630086 - 630057 - f 100 -16.7 -2.50699 | opp_overlap 630057, overlap 630056 630054 630052 TTTCAATTAATAGAG TCCAGTAGAGAAT TTAA ATTCTCTACTGGA TTTTTTATATTTAAT CPE0507 630408 - 631055 + | putative RNA polymerase sigma factor TERM 946 631129 - 631173 + F 95 -5.4 -6.09196 | gap 1 GATTTTTATGAATTA TTAAAATAGGCAATATCTTTT TTAG AAGAGA-ATTGTCTATTTTTA TTTTTTTCTTTTAAA TERM 947 632925 - 632907 - g 79 -6 -5.01811 | opp_overlap 632906 632909, overlap 632909 GTATTAAATGAAAAA GAGGCATA TCA TATGCCTA ATATTTTTAATTCTT TERM 948 632923 - 632909 - g 83 -8.6 -4.12375 | opp_overlap 632906 632909, overlap 632907 ATTAAATGAAAAAGA GGCATA TCA TATGCC TAATATTTTTAATTC TERM 949 632909 - 632923 + G 73 -8.6 -3.05624 | opp_overlap 632909 632907, overlap 632906 ATTAAATGAAAAAGA GGCATA TCA TATGCC TAATATTTTTAATTC TERM 950 632941 - 632962 + G 83 -8.9 -4.15788 | overlap 632937 ATATTTTTAATTCTT TTTTGAAAG ATAA CTTTCAAAA TTTATTGGAGGAATT TERM 951 633302 - 633281 - g 93 -8.9 -4.92783 | opp_overlap 633280 AAGCTATGATAAAAA TCTTAAAGA ATTT TCTTTAAGA ATGGCTTATAACTTT CPE0508 631476 - 633719 + | hypothetical protein TERM 952 634242 - 634226 - g 73 -9.5 -2.71681 | opp_overlap 634225 GAAGGGCTTCAAGCA GGATTTG CAA CAAATCC ATATGGTAGATGTAA TERM 953 634635 - 634622 - g 82 -6.7 -4.87592 | CTAGATATAATAAAA GCCTT TTCA AAGGC ATCAGGTAAGGAAAT galE 633797 - 634813 + | UDP-glucose 4-epimerase TERM 954 635429 - 635416 - g 78 -6.7 -4.65219 | ATAAGACAAAAAGAA CCAAG AGGA CTTGG ACATGCTATCTACTG galF 635095 - 636039 + | UTP-glucose-1-phosphate uridylyltransferase CPE0511 636364 - 637056 + | hypothetical protein TERM 955 637139 - 637125 - f 76 -4.4 -5.35354 | overlap 637118 TATAGAATTAAAAAA TATTTT ATT AAAATA ACATTTGACTTATTA TERM 956 637284 - 637305 + F 100 -10.3 -6.04953 | opp_overlap 637284 CCGCAACCACAAAAA GTTCTACTT TTTT AAGTAGAAC TTTTTTTATTTATAT TERM 957 637305 - 637284 - f 100 -10.3 -4.98255 | opp_overlap 637284 CCGCAACCACAAAAA GTTCTACTT TTTT AAGTAGAAC TTTTTTTATTTATAT TERM 958 637315 - 637349 + F 91 -13.4 -2.74192 | opp_overlap 637322 637327 637347, overlap 637311 637320 637322 637327 TAGAACTTTTTTTAT TTATATATTTAATTTA AAG TAAATTAAATATATAA TGCTATTAAAGGATA TERM 959 637320 - 637344 + F 73 -8.9 -2.86432 | opp_overlap 637322 637327, overlap 637315 637311 637322 637327 CTTTTTTTATTTATA TATTTAATTTA AAG TAAATTAAATA TATAATGCTATTAAA TERM 960 639354 - 639334 - g 71 -6.7 -3.98114 | opp_overlap 639334 AAGCTAATAGAATAA CCCCACTTG AAA CTAGAGGGG TATCTGCCATGGCTG agaN 637566 - 639770 + | alpha-galactosidase CPE0513 640665 - 639916 - | hypothetical protein CPE0514 640904 - 641428 + | signal peptidase type I CPE0515 641482 - 642117 + | hypothetical protein TERM 961 642257 - 642224 - g 72 -8.2 -3.24423 | opp_overlap 642223 642225 642228, overlap 642228 TTTAATAATATGTAA GCCAGGGGTTGCAA GTACAT TTGCAACCCCTAAT GTTGAATTAGAGGGA TERM 962 642253 - 642228 - g 100 -13.4 -2.57335 | opp_overlap 642228 642225 642223, overlap 642224 ATAATATGTAAGCCA GGGGTTGCAA GTACAT TTGCAACCCC TAATGTTGAATTAGA TERM 963 642228 - 642253 + G 100 -14.1 -2.77791 | opp_overlap 642224 642228, overlap 642225 642223 ATAATATGTAAGCCA GGGGTTGCAAG TACA TTTGCAACCCC TAATGTTGAATTAGA CPE0516 642165 - 642890 + | hypothetical protein TERM 964 643163 - 643152 - g 70 -4.4 -4.88222 | AGGAAAACCTAAAAA GGTT ACTA AACC TGTAGATATATTATT CPE0517 642907 - 644751 + | von Willebrand factor type A domain-containing protein TERM 965 644825 - 644794 - f 80 -9.8 -2.85297 | opp_overlap 644793, overlap 644791 TGACTTTAAAGATGA TTTTTCTATAATAA AAAA CTATTATAGAAAAA ATTAAATTTCATTGA CPE0518 644991 - 645707 + | DNA-binding response regulator CPE0519 645712 - 647007 + | sensor histidine kinase CPE0520 647185 - 647991 + | hypothetical protein CPE0521 648362 - 648808 + | hypothetical protein TERM 966 648833 - 648867 + F 71 -8.2 -3.00214 | overlap 648830 648860 CTTTTCAAAAAGTAA CTTATAGAATATTTTA AAT TAGGATATTTTATAAG TAATATTTATTTGTA CPE0522 648983 - 649255 + | hypothetical protein ulaA 649296 - 650567 + | ascorbate-specific PTS system enzyme IIC TERM 967 651318 - 651296 - g 85 -5.6 -5.40474 | opp_overlap 651301 651306 651307, overlap 651307 ATGTGGCTAAAAAAA TGGTAGAAAA TTT TTCTCTTCCA GAGGAAAGTTTTACT TERM 968 651306 - 651326 + G 70 -5.5 -4.33105 | opp_overlap 651296 651307, overlap 651301 651307 AAAAATGGTAGAAAA TTTTTCTCT TCC AGAGGAAAG TTTTACTGGTGATTG CPE0524 650923 - 651717 + | HAD hydrolase, IIB family TERM 969 651761 - 651812 + T 81 -5.5 -5.40873 | gap 1, opp_overlap 651761 TAACTTTTAATAAAA CTTACAAACAGTATGAAGAGAAAT CTAGT AATTCTCTGAATA-TGTTTGTAAG TTTTATTTTTATATT TERM 970 651812 - 651761 - T 71 -5.5 -4.65747 | gap 1, opp_overlap 651761 TAACTTTTAATAAAA CTTACAAACAGTATGAAGAGAAAT CTAGT AATTCTCTGAATA-TGTTTGTAAG TTTTATTTTTATATT CPE0525 652297 - 651851 - | MarR family transcriptional regulator CPE0526 652622 - 654919 + | ABC transporter TERM 971 654971 - 654958 - g 72 -8.1 -3.33261 | GCCCAATGGGTAGAA TGGGC GGAG GCCCA AGAGCCGTTGAAAAA TERM 972 655954 - 655935 - g 74 -8.6 -3.31334 | overlap 655939 GCAAATATAATGCAA TCAACAGC GGCC GCTGCTGA GAGAGTATTTGAATT CPE0527 654912 - 656768 + | ABC transporter TERM 973 656965 - 656920 - f 75 -7.9 -3.84715 | opp_overlap 656920 656922, overlap 656924 AAAATATATGAATAA TGTAGCTGATATAAATTTTAA GAAT TTTAAATTTGTATCAGCTATA TTTTTTATTTTAAGG TERM 974 656920 - 656965 + F 100 -12.3 -5.79595 | opp_overlap 656920 656924, overlap 656922 AAAATATATGAATAA TGTAGCTGATATAAATTTTAA GAAT TTTAAATTTGTATCAGCTATA TTTTTTATTTTAAGG TERM 975 656922 - 656963 + F 100 -12.7 -4.53077 | opp_overlap 656920 656924, overlap 656920 AATATATGAATAATG TAGCTGATATAAATTTTAA GAAT TTTAAATTTGTATCAGCTA TATTTTTTATTTTAA TERM 976 656961 - 656924 - f 72 -8.7 -2.68142 | opp_overlap 656922 656920, overlap 656920 TATATGAATAATGTA GCTGATATAAATTTTAA GAAT TTTAAATTTGTATCAGC TATATTTTTTATTTT CPE0528 657262 - 658143 + | hypothetical protein TERM 977 658170 - 658204 + F 100 -8 -5.61824 | ATTTTATAGTTGAAA GTTCTTAAGATGGCTT ATA AAGCTGTTTTGAGGAC TTTTTTTAGCTTTTA TERM 978 659244 - 659230 - g 70 -4.2 -4.95484 | opp_overlap 659230 659225, overlap 659225 659232 TAGTATTAAATAAAA CAGGTA TAT TACCAG TTTCATTTGAAGGAA TERM 979 659315 - 659279 - g 70 -8.7 -2.63858 | overlap 659278 TACTACAGTTATAAT GTTAGCTACTCCAACTG CTA CAGTGGCAGCAGCTTAC GCAATAAGTTTTGAT CPE0529 658398 - 659447 + | transporter, auxin efflux carrier family ldhD 659756 - 660754 + | D-lactate dehydrogenase CPE0531 661050 - 662600 + | sensor histidine kinase CPE0532 662600 - 663268 + | two-component response regulator CPE0533 663349 - 663528 + | hypothetical protein CPE0534 663686 - 664216 + | hypothetical protein TERM 980 664354 - 664390 + F 100 -10.5 -5.75599 | opp_overlap 664354 TAGAAATGTAGAGAA TTAAGAGGTTTATAGTT TTA GACTATAAATTTCTTAA TTTTTTTATGCTTTA TERM 981 664449 - 664413 - f 76 -8.4 -3.81755 | opp_overlap 664413, overlap 664416 664431 ATGCTTTAAAGATAA TAATTCTAATAAAATA AATAA TAGTTTATTAGAATTA TTTTTATTTTAGAGG TERM 982 664413 - 664449 + F 100 -8.4 -5.45802 | opp_overlap 664413 664416 664431 ATGCTTTAAAGATAA TAATTCTAATAAAATA AATAA TAGTTTATTAGAATTA TTTTTATTTTAGAGG TERM 983 664862 - 664913 + F 100 -14.2 -4.24342 | opp_overlap 664867 AGTCAAAGCATGTTA TGTAAGGATAGAGATAAATTTATT AAAT AGTAAATTAATCTCTATCCTTAAA TTTCTTAATAAGAAA TERM 984 664908 - 664867 - f 90 -11.9 -3.07291 | opp_overlap 664862 AAGCATGTTATGTAA GGATAGAGATAAATTTATT AAAT AGTAAATTAATCTCTATCC TTAAATTTCTTAATA TERM 985 665283 - 665315 + F 100 -12.2 -5.63504 | opp_overlap 665280 AATCTTAAATAGCGA GACTTATATGCAGT TTTTT GCTGCATATAGGTC TTTTTTTATAAAGTT CPE0535 665353 - 665994 + | hypothetical protein TERM 986 666094 - 666078 - f 73 -3.1 -5.57729 | AAACAAGAGAAAAAA TATTACT TGT AATAATA CATTAACAAGTGATA TERM 987 666529 - 666510 - g 100 -9.4 -5.60556 | opp_overlap 666514 AACAGAAAACAAAAA TACACCAA ACTA TTGGTGTA TCAAGATTTGTCTAT CPE0536 666446 - 667372 + | transposase CPE0537 667372 - 667644 + | transposase CPE0538 667806 - 668219 + | hypothetical protein TERM 988 668291 - 668326 + F 93 -6.5 -5.94214 | opp_overlap 668286 668291, overlap 668319 ATTAGATAATTAAAA TCTATAAATGTTA TTTGTTTTTC TAACATTTATAGA TTTTTTTATTGTGTT TERM 989 668326 - 668291 - f 75 -6.5 -4.53636 | opp_overlap 668291 668319, overlap 668286 ATTAGATAATTAAAA TCTATAAATGTTA TTTGTTTTTC TAACATTTATAGA TTTTTTTATTGTGTT CPE0539 668530 - 669645 + | NAD-dependent 4-hydroxybutyrate dehydrogenase CPE0540 669654 - 669842 + | hypothetical protein CPE0541 669878 - 670558 + | TrkA domain protein TERM 990 670590 - 670623 + T 100 -13.5 -5.63645 | opp_overlap 670583 670595 TAAAATAACTCTTTA TAAAACTTACAAACA GTAT TGTTTGTGAGTTTTA TTTTTTATATTTTGA TERM 991 670618 - 670595 - T 75 -6.8 -4.386 | opp_overlap 670590, overlap 670583 TAACTCTTTATAAAA CTTACAAACA GTAT TGTTTGTGAG TTTTATTTTTTATAT CPE0542 671125 - 670673 - | MarR family transcriptional regulator CPE0543 671379 - 672512 + | permease TERM 992 672533 - 672555 + F 100 -7.8 -5.85244 | opp_overlap 672533 GATATTCATTTTAAA GCAGTTTATT ATA AATAGGCTGC TTTTTTATTTTGATT CPE0544 672917 - 674308 + | proton/peptide symporter TERM 993 674412 - 674379 - T 75 -8.4 -3.50447 | opp_overlap 674384, overlap 674384 TTAAGTTTTATATAA GAAAAGACACATTA ATAAAA TAATGTGTCTTTTT TGTATCTTAAAAATT TERM 994 674407 - 674384 - T 88 -8.3 -4.84311 | opp_overlap 674384, overlap 674379 TTTTATATAAGAAAA GACACATTA ATAAAA TAATGTGTC TTTTTTGTATCTTAA TERM 995 674384 - 674407 + T 100 -8.3 -5.47431 | opp_overlap 674384 674379 TTTTATATAAGAAAA GACACATTA ATAAAA TAATGTGTC TTTTTTGTATCTTAA CPE0545 674686 - 674471 - | hypothetical protein CPE0546 674930 - 674700 - | hypothetical protein TERM 996 675693 - 675676 - g 72 -4.9 -4.86293 | CAAGAAAAATTAAAA CTGCATT TTCA AATACAG AGGAGGATTCAGCTC TERM 997 676670 - 676658 - g 71 -4.9 -4.78149 | TGTAGAAGCTAAAAA TTCAA CTT TTGAA GAGTGGATTAAGGAT CPE0547 675180 - 676730 + | nitrite/sulfite reductase-like protein TERM 998 676746 - 676794 + F 100 -12.2 -4.73388 | opp_overlap 676754, overlap 676754 CTGTTAACAAAATAT TTACAAAATCCAAAAAAACTTA ATAAA TAGGTTTTTTTGGATTTTTTGA TTTTTACTAAAAATT TERM 999 676754 - 676786 + F 100 -11.6 -5.54079 | opp_overlap 676754, overlap 676746 AAAATATTTACAAAA TCCAAAAAAACTTA ATAAA TAGGTTTTTTTGGA TTTTTTGATTTTTAC TERM 1000 676786 - 676754 - f 93 -9.4 -4.49781 | opp_overlap 676754 676746 AAAATATTTACAAAA TCCAAAAAAACTTA ATAAA TAGGTTTTTTTGGA TTTTTTGATTTTTAC TERM 1001 676874 - 676890 + F 91 -8.1 -5.06414 | opp_overlap 676872 676874, overlap 676865 676864 TTAGGTTTAGTAATA CTAAGTA TTT TACTTAG TTTTTGTTACCGAAA TERM 1002 676890 - 676874 - f 72 -8.1 -3.14051 | opp_overlap 676865 676864 676874, overlap 676872 TTAGGTTTAGTAATA CTAAGTA TTT TACTTAG TTTTTGTTACCGAAA speD 677043 - 677858 + | S-adenosylmethionine decarboxylase dclY 677876 - 679330 + | Orn/Lys/Arg decarboxylase speE 679345 - 680196 + | spermidine synthase TERM 1003 680692 - 680676 - g 90 -8.1 -4.85918 | opp_overlap 680675 680678 TAGGAGATAATAAAA TATTCCA ATT TGGAATA CGTTCTGGTGAAAAA speB 680183 - 681040 + | agmatinase TERM 1004 681088 - 681121 + T 78 -9.9 -2.57013 | opp_overlap 681083 681092 681095, overlap 681092 681095 ATTTAGAATATGGAT TTAAGAACTAGTT AAAATTAA AACTAGTTCTTAA TCAATTCAATTAAGG CPE0552 681621 - 681358 - | hypothetical protein TERM 1005 681849 - 681875 + G 74 -7.4 -4.0162 | opp_overlap 681847 681849, overlap 681852 681857 AAAGTAAAAAAATTA TAGCTACACTTG TTG CAAGTTTAGTTA TTTCTAATATGGGAG TERM 1006 681852 - 681872 + G 72 -6.9 -4.1337 | opp_overlap 681849 681847, overlap 681849 681857 GTAAAAAAATTATAG CTACACTTG TTG CAAGTTTAG TTATTTCTAATATGG TERM 1007 685144 - 685132 - g 81 -4.9 -5.44198 | AATAAATAAGAAAAA TGTTA AAT TAACA TGGAATGCTCCAATA nanJ 681830 - 685351 + | exo-alpha-sialidase CPE0554 685497 - 686138 + | hypothetical protein TERM 1008 686147 - 686190 + T 86 -11.5 -2.75229 | gap 1, opp_overlap 686141 686160, overlap 686160 TAAATAATATTAATT TAAAATAAAAAAACAGAGTC AATTA GACTCTG-TTTTTTATTTTG TGATTAAGGATTTTA TERM 1009 686160 - 686178 + T 100 -8.9 -5.86976 | opp_overlap 686160 686141, overlap 686147 TTTAAAATAAAAAAA CAGAGTC AATTA GACTCTG TTTTTTATTTTGTGA TERM 1010 686178 - 686160 - T 100 -8.9 -6.09196 | opp_overlap 686147 686160, overlap 686141 TTTAAAATAAAAAAA CAGAGTC AATTA GACTCTG TTTTTTATTTTGTGA TERM 1011 686209 - 686245 + T 82 -9.1 -4.1851 | opp_overlap 686208 686217 TTAAGGATTTTAAAG GTTTATAATTTAAATAT AAT ATATTTAAATTAAAAGC TTATTTATAGTTTGG CPE0555 688915 - 686246 - | copper-translocating P-type ATPase TERM 1012 688968 - 688984 + H 83 -9.3 -3.52093 | CCTTTTAAATTTTTA CCTCCCC TAG GGGGTGG TTGTGATTCAAATAT TERM 1013 689765 - 689741 - g 89 -4.3 -5.84381 | TTAGGAATAAAAAAA TTCCATCAATT ATT AGTGGATGGAA CAGGTTTTAGCATAG CPE0556 689207 - 689863 + | NAD(P)H dehydrogenase CPE0557 691147 - 692283 + | glycine betaine/carnitine/choline ABC transporter CPE0558 692276 - 693829 + | glycine betaine/carnitine/choline ABC transporter TERM 1014 693859 - 693906 + F 95 -11 -3.52317 | opp_overlap 693867, overlap 693867 ATGTTAAATAAAGAT TATAAGAAGCATATTAGGATTT ATAT AAGTCTTAATATGCTTTTTTTA TTGCTTAATTTATAA TERM 1015 693867 - 693898 + F 100 -10.4 -5.87996 | opp_overlap 693867, overlap 693859 TAAAGATTATAAGAA GCATATTAGGATTT ATAT AAGTCTTAATATGC TTTTTTTATTGCTTA TERM 1016 694024 - 694003 - f 79 -3.9 -5.67283 | overlap 694018 AACTTAAAGAAAAAA TAAAAAATT TTGA AACTTTTTA GCTACTTAAAAAGAC sigV 694087 - 694662 + | RNA polymerase sigma-70 factor CPE0560 694655 - 695743 + | hypothetical protein TERM 1017 696005 - 695995 - f 72 -4 -5.37171 | AATAGTAAATAAAAA CTTT TGA AAAG GATTAATGAAAAGGT TERM 1018 696735 - 696720 - g 73 -9 -3.07622 | opp_overlap 696719 696720 696732 ATATAGTGCAGGTAA TGGAGC CGCT GCTCCA GTTTGGGATTTTGGA TERM 1019 696720 - 696735 + G 71 -9 -2.85366 | opp_overlap 696720, overlap 696719 696732 ATATAGTGCAGGTAA TGGAGC CGCT GCTCCA GTTTGGGATTTTGGA CPE0561 696091 - 697512 + | PTS system TERM 1020 697516 - 697543 + F 75 -9.2 -2.75268 | opp_overlap 697521, overlap 697521 GCTTCAAAATAATAT AAAAAGGTGGGG GTAA CTCCACCTTTTG CTTATATAGATTTTA TERM 1021 697521 - 697538 + F 86 -9.1 -4.53034 | opp_overlap 697521, overlap 697516 AAAATAATATAAAAA GGTGGGG GTAA CTCCACC TTTTGCTTATATAGA TERM 1022 697538 - 697521 - f 83 -6.9 -5.25799 | opp_overlap 697516 697521 AAAATAATATAAAAA GGTGGGG GTAA CTCCACC TTTTGCTTATATAGA TERM 1023 698116 - 698106 - g 80 -2.4 -5.73672 | opp_overlap 698115, overlap 698115 AAAGAAGGAAAAAAA GGAG AAC CACC AACAAATTGGATTTC CPE0562 697716 - 699383 + | alpha-glucosidase TERM 1024 699461 - 699498 + F 78 -5.7 -5.09426 | opp_overlap 699465, overlap 699465 ATATATTACAAATTA AGAAGGGGTTGTATTTT AAAT AAGATGCAACTCCTTTA TTTTTTGAAATTCAC TERM 1025 699465 - 699494 + F 100 -8.7 -5.05153 | opp_overlap 699465, overlap 699461 ATTACAAATTAAGAA GGGGTTGTATTTT AAAT AAGATGCAACTCC TTTATTTTTTGAAAT TERM 1026 700199 - 700182 - g 72 -4.9 -4.86385 | ATGCTGAAAAAGAAA TAACAGT ACAA ACTGCTA CTGAGGAAGATCAAA treR 699647 - 700354 + | transcriptional regulator TERM 1027 700536 - 700514 - T 100 -8.5 -5.95539 | opp_overlap 700514 TTTTAAATAAAAAAA TGAGAGCAC TTTAC GTACTCTCA TTAACTAAATAATGT spoVD 702992 - 700806 - | stage V sporulation protein D TERM 1028 702213 - 702225 + g 71 -7.7 -3.52475 | overlap 702210 702218 CATTATTATTACTGA TGCTG CAT CAGCA TTATGATGTATTAAA TERM 1029 702506 - 702532 + g 83 -8.8 -4.17537 | GATAGTATCTTTGAG TATCAGGAGAAA CCA TTACTCCTGGTA TTTCTAATTCTTTAA CPE0565 703337 - 704005 + | N-acetylmuramoyl-L-alanine amidase TERM 1030 704278 - 704303 + F 100 -12 -4.3902 | opp_overlap 704273, overlap 704273 GCTTTAGAATCTTTA GCTCTGAACA TTTTTT TGTTCAGAGC TTTACTTTTTATACT TERM 1031 704489 - 704524 + F 100 -13.5 -5.4833 | opp_overlap 704489 704494 TACTTGGATAACTAA TAAAAGCCCTGAGTT AATTAA AACTCAGGGCTTTAA TTTTTTATTAGGTAC TERM 1032 704524 - 704489 - f 100 -13.5 -3.44622 | opp_overlap 704489, overlap 704494 TACTTGGATAACTAA TAAAAGCCCTGAGTT AATTAA AACTCAGGGCTTTAA TTTTTTATTAGGTAC TERM 1033 704519 - 704494 - f 100 -13.4 -4.81852 | opp_overlap 704489, overlap 704489 GGATAACTAATAAAA GCCCTGAGTT AATTAA AACTCAGGGC TTTAATTTTTTATTA TERM 1034 705506 - 705478 - g 75 -9.2 -2.91807 | overlap 705477 GGAGGAAATTTAAAT TTTACTTTTTTA GAAAA TAAAAAAGTAAA TAAGATATATGCCTT ribB 704572 - 705672 + | riboflavin biosynthesis protein RibD risA 705691 - 706344 + | riboflavin synthase subunit alpha ribA 706550 - 707695 + | riboflavin biosynthesis protein RibA TERM 1035 707757 - 707741 - f 72 -3.7 -5.28826 | AAAGTGGATAAAAAA GTATCAA TAT TAGATAC GAAGAATTAAAAAAA ribH 707810 - 708271 + | riboflavin synthase subunit beta TERM 1036 708334 - 708288 - T 100 -17.9 -2.78712 | opp_overlap 708290 708293, overlap 708290 708293 TTTCCAAGTTAAGTA TATAAGTTCAAGTTATAAAAT TAAAG ATTCTATAACTTGAACTTATA ATTAAAAGTATTTAT TERM 1037 708332 - 708290 - T 100 -16.1 -2.93991 | opp_overlap 708290 708293, overlap 708288 708293 TCCAAGTTAAGTATA TAAGTTCAAGTTATAAAAT TAAAG ATTCTATAACTTGAACTTA TAATTAAAAGTATTT TERM 1038 708290 - 708332 + T 100 -14.6 -2.73735 | opp_overlap 708290 708288 708293, overlap 708293 TCCAAGTTAAGTATA TAAGTTCAAGTTATAAAATT AAA GATTCTATAACTTGAACTTA TAATTAAAAGTATTT TERM 1039 708293 - 708329 + T 95 -11.9 -3.51329 | opp_overlap 708290 708288 708293, overlap 708290 AAGTTAAGTATATAA GTTCAAGTTATAAAATT AAA GATTCTATAACTTGAAC TTATAATTAAAAGTA TERM 1040 708329 - 708293 - T 100 -13.4 -3.61062 | opp_overlap 708293 708290, overlap 708290 708288 AAGTTAAGTATATAA GTTCAAGTTATAAAAT TAAAG ATTCTATAACTTGAAC TTATAATTAAAAGTA TERM 1041 708409 - 708380 - T 72 -6 -4.47786 | gap 1, opp_overlap 708376 708383, overlap 708370 708384 AACTATTTAAATAAA CTTA-GTGTTAAA GTTTA TTTAACACATAAG TTACAAGGATCAGAT CPE0570 709266 - 708394 - | hypothetical protein CPE0571 709777 - 709370 - | hypothetical protein TERM 1042 709798 - 709820 + H 83 -3.6 -5.95539 | opp_overlap 709816, overlap 709801 709816 CACCCCTTTAAATCT TACTATATAA ACA TTATATAATA TTTTTTTATTTGAAA CPE0572 710160 - 710423 + | hypothetical protein TERM 1043 711328 - 711311 - g 78 -4.2 -5.43866 | GAAGCTTTAAAAAAA TGGATT GATGAG AATCCA GAAGTAGATGTAGTT CPE0573 710699 - 712918 + | hypothetical protein TERM 1044 712977 - 712949 - f 85 -10.4 -3.05022 | opp_overlap 712949, overlap 712951 TCCCTTATATATATA GATCCTTAGTGA GTTTT TCACTAAGGGTC TTTTTAAATTTTATA TERM 1045 712949 - 712977 + F 100 -13.3 -4.89729 | opp_overlap 712949 712951 TCCCTTATATATATA GATCCTTAGTGAG TTT TTCACTAAGGGTC TTTTTAAATTTTATA CPE0574 713265 - 714854 + | sensor histidine kinase CPE0575 714866 - 716455 + | DNA-binding response regulator, AraC family CPE0576 716608 - 717993 + | ABC transporter TERM 1046 718021 - 718045 + F 100 -13.7 -3.69354 | opp_overlap 718013 718014 718008 718024, overlap 718024 718037 AATAAAATTTATTGA GAAGGAGAGGA GGT TCTTCTCCTTC TTTAAAATTATAGGG TERM 1047 718024 - 718042 + F 86 -9.6 -3.97689 | opp_overlap 718024 718013 718014 718008, overlap 718021 718037 AAAATTTATTGAGAA GGAGAGGA GGT TCTTCTCC TTCTTTAAAATTATA CPE0577 718072 - 719007 + | ABC transporter permease CPE0578 719139 - 719882 + | ABC transporter TERM 1048 719953 - 719927 - f 73 -8 -3.73084 | opp_overlap 719927, overlap 719925 719922 ATTATTAAAATAAGA GCAGATGTCACT TTT AGTGAGGTCTGC TTTTTTAGTTAAAAT TERM 1049 719927 - 719953 + F 100 -10.2 -5.27477 | opp_overlap 719927 719925 719922 ATTATTAAAATAAGA GCAGATGTCACT TTT AGTGAGGTCTGC TTTTTTAGTTAAAAT CPE0579 720118 - 720813 + | DedA family protein CPE0580 720785 - 721915 + | iron-sulfur binding reductase CPE0581 722078 - 722665 + | hypothetical protein TERM 1050 723084 - 723069 - g 75 -4.6 -5.08255 | ATCTTGAAAATAAAA CAAGCC ACGT GGCTAG AGTTGAAGAGTTAGA TERM 1051 723390 - 723368 - g 79 -5 -5.21459 | AAAAAGAAAAATAAA GAAATTAC AGAGAGA GTAATTTC AATAAATAAAATAGA CPE0582 722951 - 723583 + | hypothetical protein TERM 1052 724443 - 724423 - g 79 -8.3 -3.90761 | overlap 724426 CAACTCACATAATAA CAACTACCA TAA TGGGAGTTG GAGCTTCTAAAAACC CPE0583 723576 - 724574 + | phosphate ABC transporter permease TERM 1053 724620 - 724656 + T 100 -7.6 -5.5604 | gap 1, opp_overlap 724620 AAAATTTTAATTAAA GATTAGATAGA-ATCCT AAAA AGAATTTCTATCTAATC TTTTTTATTGCTTAG TERM 1054 724656 - 724620 - T 93 -9.8 -3.95042 | gap 1, opp_overlap 724620 AAAATTTTAATTAAA GATTAGATAGAA-TCCT AAAA AGAATTTCTATCTAATC TTTTTTATTGCTTAG TERM 1055 724973 - 724991 + T 71 -5.4 -4.68545 | TCTTCATACTGTTTG TAAGTTTT GTT AAGACTTA TTTTATATATTAACT CPE0584 726898 - 725006 - | PTS system TERM 1056 725866 - 725848 - G 74 -8.2 -3.56558 | GAACAGGAATCATAA GGAAGAAA GCA TTTCCTCC ACCGATATCTTTTAA fruB 727822 - 726902 - | 1-phosphofructokinase fruR 728568 - 727822 - | transcriptional regulator TERM 1057 728981 - 728993 + G 74 -2 -5.54907 | opp_overlap 728981 AATAATTAGTTTAAA TTCA CATAA TGAA TTTTTATTTTCTCCA CPE0587 728859 - 729182 + | hypothetical protein TERM 1058 729356 - 729335 - T 79 -5.2 -5.5112 | opp_overlap 729329 729319 729335, overlap 729320 TTGAGTAAGAAAAAA GAAGTTGC TTTAAT ACAACTTC TTTTTCTTATTCAGC TERM 1059 729335 - 729356 + T 76 -4.5 -5.29445 | opp_overlap 729335 729320, overlap 729329 729319 TTGAGTAAGAAAAAA GAAGTTG CTTTAATA CAACTTC TTTTTCTTATTCAGC CPE0588 730463 - 729363 - | permease CPE0589 730721 - 731380 + | isochorismatase family protein TERM 1060 731657 - 731712 + F 100 -19.6 -5.14563 | opp_overlap 731660 731671 AATGCTTTATGCTAA TGACTCCTACAAAATACAAGTTATAT GTTT ATATAGCTTATATTTTGTAGGAGTTA TTTTTTGCTCAAAAA TERM 1061 731709 - 731660 - f 100 -19.1 -2.73364 | opp_overlap 731657, overlap 731671 GCTTTATGCTAATGA CTCCTACAAAATACAAGTTATAT GTTT ATATAGCTTATATTTTGTAGGAG TTATTTTTTGCTCAA CPE0590 731757 - 733070 + | hypothetical protein TERM 1062 733167 - 733121 - f 100 -12.1 -3.88291 | gap 1, opp_overlap 733124, overlap 733109 733124 GAGTATTTTTATAAA TAGCTTATAGTATTCTTT-GAA GTTT TTCTAAAGAATACTATAAGTTA ATAAAAAGTAAATAA TERM 1063 733164 - 733124 - f 100 -13.8 -2.71422 | gap 1, opp_overlap 733124, overlap 733121 TATTTTTATAAATAG CTTATAGTATTCTTT-GAA GTTT TTCTAAAGAATACTATAAG TTAATAAAAAGTAAA TERM 1064 733124 - 733164 + F 100 -13.8 -3.14931 | gap 1, opp_overlap 733124 733121 TATTTTTATAAATAG CTTATAGTATTCTTT-GAA GTTT TTCTAAAGAATACTATAAG TTAATAAAAAGTAAA CPE0591 733374 - 734297 + | glutaminase TERM 1065 734317 - 734370 + F 73 -2.9 -5.79595 | gap 1, overlap 734318 TTTTAAATAAGTAAA T-TAGGTTTAAGTATGTTTAGAGT GATTAAA AATCTAAATATATTTAAGCCTATA TTTTTTATTTTAACA TERM 1066 734318 - 734368 + F 81 -8 -4.53077 | overlap 734317 TTTAAATAAGTAAAT TAGGTTTAAGTATGTTTAGAGT GATTAAA AATCTAAATATATTTAAGCCTA TATTTTTTATTTTAA CPE0592 734586 - 735311 + | Mg2+ transporter TERM 1067 735976 - 735951 - f 72 -9.1 -2.61735 | overlap 735950 735958 TTAATACCGCATAAT GTTGAAAGATG GCAT CATCATTCAAC CAAAGGAGCAATCCG TERM 1068 737270 - 737251 - f 75 -9.2 -2.65808 | opp_overlap 737254 737257, overlap 737248 737263 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 1069 737316 - 737296 - f 72 -8.4 -3.23853 | overlap 737294 CCTTTCTAAGGAATA CATCTTAG GACAA CTAAGATG ATAATGAATTCTGGA TERM 1070 737345 - 737373 + F 100 -12.7 -3.94 | overlap 737348 GATAATATCTCTGTT TAATTTTGAGAGA CTA TCTCTCAAAATTG TTCTTTGAAAATTGC TERM 1071 737348 - 737370 + F 100 -12.2 -4.08958 | overlap 737345 AATATCTCTGTTTAA TTTTGAGAGA CTA TCTCTCAAAA TTGTTCTTTGAAAAT TERM 1072 737426 - 737416 - f 71 -6.8 -4.18983 | opp_overlap 737422, overlap 737422 TTATAGAAACAACAA GCCA AAT TGGC AAAACCAATTTCTAT TERM 1073 737603 - 737618 + F 73 -9 -2.92371 | opp_overlap 737600 737603, overlap 737605 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 1074 737618 - 737603 - f 72 -9 -2.69489 | opp_overlap 737603 737605, overlap 737600 GAATGAGGAAACTCA CATGGG AAAC CCCATG TATCATTAAGTGAAT TERM 1075 737761 - 737744 - f 90 -9.9 -3.695 | opp_overlap 737743 737742 GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTTGTGGACATAGC TERM 1076 737928 - 737913 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 1077 738002 - 737991 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 1078 738238 - 738228 - f 71 -6.8 -4.15453 | opp_overlap 738231 GAAGCGAGGGTAAAA CCTC GTG GAGG ACCGAACCACGTTGC TERM 1079 738824 - 738808 - f 82 -8.7 -4.13014 | CCCACAGGCCGAAAA CCTAAGG TTT CCTCAGG AAGGTTCGTCCGCTG TERM 1080 740722 - 740700 - f 100 -15 -3.21218 | opp_overlap 740700 AGGGGTCACCATTAA CTCGATAAGC AAT GCTTATCGAG TTTTTTATTTATAAA TERM 1081 740700 - 740722 + F 100 -15 -5.72622 | opp_overlap 740700 AGGGGTCACCATTAA CTCGATAAGC AAT GCTTATCGAG TTTTTTATTTATAAA TERM 1082 740725 - 740738 + F 73 -2.5 -5.68438 | AATGCTTATCGAGTT TTTTA TTTA TAAAA TTTTTTGTTTGATGA sfsA 741120 - 741812 + | sugar fermentation stimulation protein A CPE0594 742291 - 742764 + | hydrolase, NUDIX family TERM 1083 743062 - 743083 + F 100 -13.1 -5.47159 | opp_overlap 743060 743064 AAGTTGCGATTAAGG CAGCAAAGG TGTT CCTTTGCTG TTTTTATTTATTGGA TERM 1084 743081 - 743064 - f 78 -9.9 -2.56596 | opp_overlap 743062, overlap 743060 GTTGCGATTAAGGCA GCAAAGG TGTT CCTTTGC TGTTTTTATTTATTG TERM 1085 743452 - 743466 + G 71 -8.6 -2.79492 | overlap 743451 GTGGAGAGCTTTATA CTGCTT ATA AAGCAG GTTTCCCATTAGAAA lysA 743070 - 744470 + | diaminopimelate decarboxylase TERM 1086 744507 - 744482 - f 70 -4.8 -4.73864 | opp_overlap 744482, overlap 744477 TTAATTAATATAAAA GTTGTATGGT AAAAAA ACTATACAAC TTTTTTTATTAAAAG TERM 1087 744482 - 744507 + F 93 -7 -5.7946 | opp_overlap 744477 744482 TTAATTAATATAAAA GTTGTATGGT AAAAAA ACTATACAAC TTTTTTTATTAAAAG CPE0596 744879 - 745145 + | hypothetical protein TERM 1088 745229 - 745240 + G 74 -3 -5.38549 | overlap 745238 TTACTATTAGCAGCT TTGA TTCA TCAA TTTTTATTGTTTAAG sipS 745148 - 745678 + | signal peptidase type I TERM 1089 745943 - 745956 + G 70 -8.1 -3.13403 | opp_overlap 745942 745939 745938 745943, overlap 745942 745953 TTATATACAACTAAT CCAGC AGTT GCTGG TATTACTCAACCAGA TERM 1090 747123 - 747107 - g 70 -3.7 -5.16841 | overlap 747109 CCAGAGGAAGAAAAA TACTTAG TAT CTAAGGA AGAAATGATAGATCA TERM 1091 747121 - 747109 - g 72 -6.3 -4.20491 | overlap 747107 AGAGGAAGAAAAATA CTTAG TAT CTAAG GAAGAAATGATAGAT TERM 1092 747426 - 747407 - g 80 -6.6 -4.75404 | AAAGCTCATGAAAAA TCAATTAA GATT TTAATTGA AAATAGAGAGTTATT ftsH 745703 - 747856 + | ATP-dependent metalloprotease FtsH TERM 1093 747955 - 747983 + F 86 -7.5 -4.88222 | opp_overlap 747955, overlap 747964 ATAAGATTATAAAAT GTGCATGAGGT TAAAAAT GCTTCATGCAC TTTTTGACTTTTCAT CPE0599 748076 - 750196 + | hypothetical protein TERM 1094 750547 - 750579 + F 93 -8 -5.20534 | opp_overlap 750556 TTAAAAATCAACCTT TGCAATATATTTAT ATTAA AAAAATATATTGCA TTTTTATTCATTAAT CPE0600 750652 - 751488 + | amino acid ABC transporter TERM 1095 751724 - 751735 + G 73 -5.8 -4.65078 | opp_overlap 751724 ATGTAGAAGTTATAA GAGG AACA CCTC TTTTATTACAAATAT CPE0601 751519 - 752190 + | amino acid ABC transporter TERM 1096 752643 - 752620 - g 79 -8.2 -3.91858 | GACAAAAACAGAGAA TAGCTATAGC AAGA GCTTTAGCTA TGGAACCAGATGTTA CPE0602 752187 - 752909 + | amino acid ABC transporter TERM 1097 752915 - 752952 + F 75 -9.5 -2.61216 | opp_overlap 752922 752924, overlap 752915 752922 752925 AGTTTTATAAATGCC TTTAAGAGATTAAATCT TAAT AGATTTACTCTTTTAAA TAAATTAATTAGTAC TERM 1098 752965 - 753011 + F 95 -10.6 -4.13945 | gap 1, opp_overlap 752973, overlap 752973 AAATAAATTAATTAG TACAAAAAGAGGATGTAAAGA CAAAAA TCTTTATGTCCTC-TTTTGTA TTTTAAAATAAAAAT TERM 1099 752973 - 753004 + F 93 -8.9 -4.89567 | opp_overlap 752973, overlap 752965 TAATTAGTACAAAAA GAGGATGTAAAGA CAAAAA TCTTTATGTCCTC TTTTGTATTTTAAAA TERM 1100 753004 - 752973 - f 72 -5.2 -4.94902 | opp_overlap 752973 752965 TAATTAGTACAAAAA GAGGATGTAAAGAC AAAA ATCTTTATGTCCTC TTTTGTATTTTAAAA TERM 1101 754617 - 754601 - g 71 -4.5 -4.70583 | opp_overlap 754609 TCTACGAAGATAAAA TAAAAGA TGC TCCTTTA GAGGGAGATTGGTGG CPE0603 753127 - 754935 + | hypothetical protein TERM 1102 754937 - 754994 + F 88 -8.1 -4.89562 | opp_overlap 754941, overlap 754939 754941 754943 754947 TTAAAAATAATTAAT TAAATTTAAAGCTATTAGCTATATTTT TATT AGGATTTAGCTAATAGCTTTACATATG TTTTATTAGTTTTAA TERM 1103 754939 - 754992 + F 79 -8.5 -4.04459 | opp_overlap 754941, overlap 754937 754941 754943 754947 AAAAATAATTAATTA AATTTAAAGCTATTAGCTATATTTT TATT AGGATTTAGCTAATAGCTTTACATA TGTTTTATTAGTTTT TERM 1104 754990 - 754941 - f 71 -6.8 -4.05045 | opp_overlap 754941 754939 754937 754943 754947 AAATAATTAATTAAA TTTAAAGCTATTAGCTATAT TTTTATTAGG ATTTAGCTAATAGCTTTACA TATGTTTTATTAGTT TERM 1105 754941 - 754990 + F 95 -11.1 -3.57772 | opp_overlap 754941, overlap 754939 754937 754943 754947 AAATAATTAATTAAA TTTAAAGCTATTAGCTATATTTT TATT AGGATTTAGCTAATAGCTTTACA TATGTTTTATTAGTT TERM 1106 754943 - 754959 + F 70 -3.7 -5.11112 | opp_overlap 754941, overlap 754941 754939 754937 754947 ATAATTAATTAAATT TAAAGCT ATT AGCTATA TTTTTATTAGGATTT TERM 1107 754947 - 754984 + F 90 -10.1 -3.80569 | opp_overlap 754941, overlap 754943 754941 754939 754937 TTAATTAAATTTAAA GCTATTAGCTATATTTT TATT AGGATTTAGCTAATAGC TTTACATATGTTTTA CPE0604 755187 - 757031 + | hypothetical protein TERM 1108 757102 - 757125 + T 100 -12.6 -4.45168 | opp_overlap 757102 GTTTGTATAAAAAAA GTAGCTATGA AAAT TCATAGCTAC TTTCTCTTTTAACAA TERM 1109 757125 - 757102 - T 100 -12.6 -5.60993 | opp_overlap 757102 GTTTGTATAAAAAAA GTAGCTATGA AAAT TCATAGCTAC TTTCTCTTTTAACAA CPE0605 758315 - 757134 - | cation efflux family protein TERM 1110 758197 - 758181 - G 70 -5.3 -4.55118 | opp_overlap 758181 TAATCCTACAGAAAA TTTTATT AAG AATAAAA TTATATTAACAATTA TERM 1111 758279 - 758290 + g 75 -4.4 -5.19328 | CTGTGTTTTTGTAAT CCTT AATG AAGG TTTTTATTATAAGAT entD 758558 - 760465 + | enterotoxin CPE0607 760607 - 761902 + | putative aminopeptidase 2 TERM 1112 761985 - 761960 - T 76 -6.2 -4.84492 | opp_overlap 761961, overlap 761955 761961 TTAATTATAACAAAA GTGGGATGTA GAAATT TACATCCCAT TTTTTATATTTAAAT TERM 1113 761984 - 761961 - T 83 -9.7 -3.49611 | opp_overlap 761961, overlap 761960 761955 TAATTATAACAAAAG TGGGATGTA GAAATT TACATCCCA TTTTTTATATTTAAA TERM 1114 761961 - 761984 + T 100 -10.4 -5.56264 | opp_overlap 761960 761955 761961 TAATTATAACAAAAG TGGGATGTAG AAAT TTACATCCCA TTTTTTATATTTAAA CPE0608 762189 - 761995 - | hypothetical protein TERM 1115 762333 - 762362 + H 73 -7.5 -3.73336 | opp_overlap 762338, overlap 762327 762334 762338 CTCTAAATTTTTAGC TTAAATTTATTTT TCCC AAAATAAATTTAG TTATTAAGTTAAAAT TERM 1116 762334 - 762361 + H 73 -8.8 -2.8352 | opp_overlap 762338, overlap 762327 762333 762338 TCTAAATTTTTAGCT TAAATTTATTTT TCCC AAAATAAATTTA GTTATTAAGTTAAAA CPE0609 762581 - 763420 + | HAD hydrolase, IIB family TERM 1117 763563 - 763525 - T 100 -12 -4.41616 | opp_overlap 763527, overlap 763527 ATTTTCTTAAATAAA GAGAGACTAAAATCGTAA AAT TTAGGATTTTAGTCTCTT TATTTTTATAAAAAT TERM 1118 763527 - 763561 + T 100 -14.6 -4.96501 | opp_overlap 763527 763525 TTTCTTAAATAAAGA GAGACTAAAATCGTAA AAT TTAGGATTTTAGTCTC TTTATTTTTATAAAA TERM 1119 763561 - 763527 - T 100 -14.6 -3.81557 | opp_overlap 763527, overlap 763525 TTTCTTAAATAAAGA GAGACTAAAATCGTAA AAT TTAGGATTTTAGTCTC TTTATTTTTATAAAA CPE0610 766966 - 763637 - | hypothetical protein TERM 1120 765355 - 765372 + g 82 -4.1 -5.54894 | overlap 765357 GAGCACTTTGAAGTT CAGAAAC CCCA GTTTCAG TTTTTTTAGTACCTT TERM 1121 765522 - 765536 + g 77 -8.6 -3.70076 | opp_overlap 765521 ATACCTTGTGAAACT TGACCA GCT TGGTCA TTTACATAAATTTCA TERM 1122 767172 - 767207 + r 70 -5.1 -4.88918 | gap 2, opp_overlap 767172, overlap 767167 TTAAATGCAAAAAAA CACATGATTCTTTAAGA GTTT TCTTAAA-A-TCATGTG TTTTCTTTAAAATAA TERM 1123 767207 - 767172 - R 79 -5.1 -5.58209 | gap 2, opp_overlap 767167 767172 TTAAATGCAAAAAAA CACATGATTCTTTAAGA GTTT TCTTAAA-A-TCATGTG TTTTCTTTAAAATAA CPE0611 768822 - 767227 - | peptide chain release factor 3 TERM 1124 767419 - 767432 + g 74 -5.3 -4.9725 | opp_overlap 767419 TCTAACATATCTAAA TGGAA GTCT TTCCA TTTTTATATCAACAT TERM 1125 767490 - 767478 - G 70 -6.3 -4.1721 | ATCTATATTCTAAAA CTTCA AAT TGAAG AACACCAACAACACC TERM 1126 767832 - 767847 + g 78 -6.2 -4.70879 | TACCACCTTGAACGT GGAAAA CATC TTTTCC TTTTTCAAATTTACC TERM 1127 769024 - 768993 - R 85 -6.1 -5.63103 | opp_overlap 768988 768985 768993 TTTTAAGTAAAAAAA TAGGTCATATT CTTAACCTTT AATATGACCTA TTTTATATATTTTAT TERM 1128 768993 - 769024 + r 76 -6.1 -4.80289 | opp_overlap 768993, overlap 768988 768985 TTTTAAGTAAAAAAA TAGGTCATATT CTTAACCTTT AATATGACCTA TTTTATATATTTTAT CPE0612 769641 - 769036 - | hypothetical protein TERM 1129 769874 - 769844 - H 100 -12.2 -4.14541 | opp_overlap 769848, overlap 769848 769851 TATTAATGATACAAA CAAATTATTACAAA TTA TTTGCAATAATTTG AAAAAAAGCAATGAT TERM 1130 769870 - 769848 - H 79 -7.2 -4.64952 | opp_overlap 769848, overlap 769844 769851 AATGATACAAACAAA TTATTACAAA TTA TTTGCAATAA TTTGAAAAAAAGCAA CPE0613 770017 - 770817 + | hypothetical protein rfbP 770858 - 771520 + | undecaprenyl phosphate galactosephosphotransferase rfbN 771521 - 772435 + | rhamnosyl transferase rfbA 772458 - 773339 + | glucose-1-phosphate thymidylyltransferase TERM 1131 773401 - 773367 - f 95 -10.4 -4.10566 | opp_overlap 773367 AGACGATTATATAAA TTTACATAATATAACA AAT TCTTATATTATGTAAA TTTTTTTGAACTTTA TERM 1132 773367 - 773401 + F 100 -10.4 -5.49809 | opp_overlap 773367 AGACGATTATATAAA TTTACATAATATAACA AAT TCTTATATTATGTAAA TTTTTTTGAACTTTA rfbC 773532 - 774014 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1133 774874 - 774885 + G 72 -4.4 -5.03314 | opp_overlap 774874 AGAGATTGGAAGGAA GCTT TAAA AAGC TTTTTTGAAAATCAA rfbD 774028 - 774912 + | dTDP-4-dehydrorhamnose reductase TERM 1134 775888 - 775874 - g 74 -7.2 -3.92373 | GATGGTATCCAGAAA CAACTT TTG AAGTTG GAATAAAGAAAACAA rfbB 774940 - 775989 + | dTDP-glucose 4,6-dehydratase CPE0620 776014 - 777228 + | hypothetical protein TERM 1135 777325 - 777311 - g 71 -7.2 -3.81027 | TCTAATGAATTCAAA TTATCC AAT GGATAA AGTTGAAGTAATCAT TERM 1136 777912 - 777922 + G 72 -4 -5.01497 | opp_overlap 777912, overlap 777907 777906 777900 GGTGCAATGGTAAAA TCAA ATT TTGA TTTTTCTATGCTAAT CPE0621 777225 - 778073 + | glycosyltransferase TERM 1137 778080 - 778118 + F 93 -9.9 -4.04752 | opp_overlap 778081 778089, overlap 778081 778089 AAAAATTAACCATAA AGCATAAAAGAATTTTG AAATA TAAAATTCTTTTATGCA TTTATAATATAATTT TERM 1138 778117 - 778081 - f 100 -12.7 -4.12841 | opp_overlap 778080 778081 778089, overlap 778089 AAAATTAACCATAAA GCATAAAAGAATTTT GAAATAT AAAATTCTTTTATGC ATTTATAATATAATT TERM 1139 778081 - 778117 + F 95 -13.4 -3.01766 | opp_overlap 778081 778089, overlap 778080 778089 AAAATTAACCATAAA GCATAAAAGAATTTTG AAATA TAAAATTCTTTTATGC ATTTATAATATAATT CPE0622 778167 - 778907 + | hypothetical protein CPE0623 778916 - 780367 + | capsular polysaccharide synthesis protein TERM 1140 781473 - 781484 + G 73 -5.8 -4.67038 | opp_overlap 781472 CACAAAATAAATATG GAGC AAAT GCTC TTTTACTTTTAGGAC CPE0624 780389 - 782812 + | hypothetical protein TERM 1141 782848 - 782807 - f 79 -9 -3.79505 | opp_overlap 782813 782819 782839, overlap 782810 782813 782819 AAAGGAATATGGAAA CAGTAATAAAAAGACTGA TTAAAT TCAGTCTTTTTATTATAG AATAAATTTCTAATA TERM 1142 782845 - 782810 - f 100 -13.7 -2.674 | opp_overlap 782813 782819 782839, overlap 782807 782813 782819 GGAATATGGAAACAG TAATAAAAAGACTGA TTAAAT TCAGTCTTTTTATTA TAGAATAAATTTCTA TERM 1143 782842 - 782813 - f 93 -11 -3.47431 | opp_overlap 782813 782819 782839, overlap 782810 782807 782819 ATATGGAAACAGTAA TAAAAAGACTGA TTAAAT TCAGTCTTTTTA TTATAGAATAAATTT TERM 1144 782813 - 782842 + F 93 -11 -3.34236 | opp_overlap 782810 782807 782813 782819, overlap 782819 782839 ATATGGAAACAGTAA TAAAAAGACTGA TTAAAT TCAGTCTTTTTA TTATAGAATAAATTT TERM 1145 782819 - 782836 + F 78 -5.6 -5.19328 | opp_overlap 782813 782810 782807 782819, overlap 782813 AAACAGTAATAAAAA GACTGA TTAAAT TCAGTC TTTTTATTATAGAAT TERM 1146 782836 - 782819 - f 78 -5.6 -5.20606 | opp_overlap 782819 782813, overlap 782813 782810 782807 AAACAGTAATAAAAA GACTGA TTAAAT TCAGTC TTTTTATTATAGAAT CPE0625 782941 - 784593 + | hypothetical protein TERM 1147 784611 - 784648 + F 100 -9.5 -5.86465 | opp_overlap 784611 ATAAGTATAACTAAA CTATATGATAGAATTTT AAAA ATAATTTTATCATATAG TTTTTTTATGTTGTT TERM 1148 784648 - 784611 - f 73 -7.3 -4.04897 | opp_overlap 784611 ATAAGTATAACTAAA CTATATGATAGAATTTT AAAA ATAATTTTATCATATAG TTTTTTTATGTTGTT TERM 1149 785414 - 785400 - g 79 -7.2 -4.45168 | opp_overlap 785400 TTGGCAAAATATAAA TGATAC ATG GTATCA TCTTAAAGAAAATGG CPE0626 784795 - 786159 + | hypothetical protein TERM 1150 786261 - 786289 + F 100 -14.9 -5.89921 | opp_overlap 786261 AAATAGTTTTAAGAA GTATTAACTTATC TAG GATAAGTTAATAC TTTTTTTATTGTAAT TERM 1151 786289 - 786261 - f 100 -14.9 -3.65603 | opp_overlap 786261 AAATAGTTTTAAGAA GTATTAACTTATC TAG GATAAGTTAATAC TTTTTTTATTGTAAT TERM 1152 787474 - 787440 - g 75 -4.6 -5.15167 | opp_overlap 787446 TATGACTAATAAAAA CTATA-AGGCTTTTGT AAATG ACA-AAGCCTATATAG TAAGAATACCAGGAT licA 786364 - 788232 + | choline kinase licB 788258 - 789226 + | lic-1 operon protein licC 789373 - 790056 + | lic-1 operon protein TERM 1153 790059 - 790100 + T 100 -14.7 -5.38951 | opp_overlap 790061, overlap 790061 AGTAGAGAAATAATA AAGACAAGCTATTAGCTTA AGTT TTAGCTAATAGCTTGTCTC TTTTTTATATAAATT TERM 1154 790098 - 790061 - T 100 -17.3 -4.65458 | opp_overlap 790059 790061 TAGAGAAATAATAAA GACAAGCTATTAGCTTA AGTT TTAGCTAATAGCTTGTC TCTTTTTTATATAAA TERM 1155 790061 - 790098 + T 100 -17.3 -4.31943 | opp_overlap 790061, overlap 790059 TAGAGAAATAATAAA GACAAGCTATTAGCTTA AGTT TTAGCTAATAGCTTGTC TCTTTTTTATATAAA CPE0630 791467 - 790175 - | hypothetical protein TERM 1156 791578 - 791548 - R 78 -6.5 -4.90869 | gap 1, opp_overlap 791553 791577, overlap 791551 791572 791577 AGTATTAAGCAAAAA TA-ATACTTCTATA AATA TATAGAAGTATATA AAAAATTTTATTTTT TERM 1157 791574 - 791551 - R 100 -9.8 -4.54681 | opp_overlap 791553, overlap 791548 791572 ATTAAGCAAAAATAA TACTTCTATA AATA TATAGAAGTA TATAAAAAATTTTAT CPE0631 792605 - 791586 - | PBP5 synthesis regulator protein TERM 1158 792862 - 792828 - R 100 -10.4 -5.72622 | opp_overlap 792828 792831 792861, overlap 792860 792861 TTTATAAATAAAAAA GAATATTTATCAAA TATAAAT TTTGATAAATATTC TTATATTATAAGATA TERM 1159 792828 - 792862 + r 91 -10.4 -3.75824 | opp_overlap 792828 792860 792861, overlap 792831 792861 TTTATAAATAAAAAA GAATATTTATCAAA TATAAAT TTTGATAAATATTC TTATATTATAAGATA brnQ 794159 - 792885 - | branched chain amino acid ABC transporter carrier protein TERM 1160 794745 - 794726 - H 70 -8 -3.45784 | opp_overlap 794723, overlap 794724 GTTACAAGAAAGAGA TACAAAGA ATTT TCTTTGTA ACATTAGGTGGTACC TERM 1161 794772 - 794799 + H 100 -11.4 -5.79595 | TACCGCGATATATTC GTCCTATAAGTC TTAT GGCTTATAGGGC TTTTTTATTTTAAAA trpS 794912 - 795910 + | tryptophanyl-tRNA synthetase CPE0634 796572 - 797111 + | hypothetical protein TERM 1162 798110 - 798094 - g 72 -6.7 -4.12899 | ATGACAATGAAAGAA TTATTTG AAA CAAATAA AAATCATGAGTTTAT CPE0635 797206 - 798318 + | anaerobic sulfatase-maturase TERM 1163 798543 - 798563 + F 73 -7.7 -3.76393 | opp_overlap 798543 TGCATAAGTTCAAGA GTCAAAATT AAA AATTTTGGC TTTCACTTAAAATCT CPE0636 798746 - 799576 + | phosphate ABC transporter phosphate-binding protein TERM 1164 799635 - 799605 - f 72 -8.5 -3.19255 | opp_overlap 799605 TTAATATACATTTAA TCCTAAGAATAGA TTATT TATATTCTTAGGA TTTTTTTATTAGATT TERM 1165 799605 - 799635 + F 100 -8.5 -5.83226 | opp_overlap 799605 TTAATATACATTTAA TCCTAAGAATAGA TTATT TATATTCTTAGGA TTTTTTTATTAGATT CPE0637 799800 - 800618 + | phosphate ABC transporter phosphate-binding protein TERM 1166 800864 - 800850 - g 70 -8.6 -2.65442 | opp_overlap 800859 AGACCATTCATAGTA GAAGGA TAC TCCTTC TGGGATTTCATATTT CPE0638 800700 - 801587 + | phosphate ABC transporter permease CPE0639 801590 - 802414 + | phosphate ABC transporter permease CPE0640 802432 - 803193 + | phosphate ABC transporter ATP-binding protein phoU 803218 - 803871 + | phosphate transporter PhoU TERM 1167 803940 - 803962 + F 80 -2.8 -6.09196 | GTATAATAATTTAAA GATATATC TATAAGT GGTATATC TTTTTTTGTTTTCAA TERM 1168 804258 - 804246 - g 74 -6.3 -4.43714 | AGAAATTAGAAGAAA TGAAG AAA CTTCA GATATTCCAGTAATG CPE0642 804031 - 804726 + | DNA-binding response regulator TERM 1169 804883 - 804845 - T 95 -5.6 -6.04419 | gap 1, opp_overlap 804850, overlap 804850 AAAATAATAAAAAAA TAAAACCACTCAGAT AATGGCAGAA ATCTGAGTGG-TTTA TTAGCAATGAGAGTC TERM 1170 804850 - 804879 + T 77 -8 -4.16842 | opp_overlap 804845 804850 AATAAAAAAATAAAA CCACTCAGAT AATGGCAGAA ATCTGAGTGG TTTATTAGCAATGAG TERM 1171 804879 - 804850 - T 100 -8 -5.64328 | opp_overlap 804850, overlap 804845 AATAAAAAAATAAAA CCACTCAGAT AATGGCAGAA ATCTGAGTGG TTTATTAGCAATGAG CPE0643 805520 - 804897 - | hypothetical protein flaV 805970 - 805554 - | flavodoxin gltX 808042 - 806384 - | glutaminyl-tRNA synthetase TERM 1172 808236 - 808264 + r 90 -11.9 -2.95102 | opp_overlap 808241, overlap 808241 ATGAAATAGAAATGA AAAAAGTTCTGCA AAG TGCAGAACTTTTA ATTTATGAATAAACT TERM 1173 808259 - 808241 - R 100 -11.8 -5.4387 | opp_overlap 808241 808236 ATAGAAATGAAAAAA GTTCTGCA AAG TGCAGAAC TTTTAATTTATGAAT TERM 1174 808241 - 808259 + r 100 -11.8 -4.62475 | opp_overlap 808241, overlap 808236 ATAGAAATGAAAAAA GTTCTGCA AAG TGCAGAAC TTTTAATTTATGAAT CPE0646 808450 - 808295 - | hypothetical protein CPE0647 809693 - 808605 - | hypothetical protein TERM 1175 809347 - 809335 - G 71 -4.9 -4.78157 | ATGAAAAACAATAAA CAATA CCA TATTG GACTTTGAGCAAAAA TERM 1176 810361 - 810351 - gH 72 -2.6 -5.43487 | AAATCAGAGAAAAAA TAAA AAA TTTA GATTATAAGTTTATA gerKA 809789 - 811210 + | spore germination protein KA gerBC 811185 - 812309 + | spore germination protein B3 TERM 1177 812410 - 812436 + F 84 -8.8 -4.28487 | opp_overlap 812410, overlap 812405 AATCAATTTAAAAAA GCCTATGGAATA TAA TGTTCTATGGGC TTTAATTTTATGCTA CPE0650 812504 - 813637 + | AAA domain family protein CPE0651 813713 - 814126 + | hypothetical protein TERM 1178 814204 - 814234 + F 100 -10 -5.82281 | opp_overlap 814204 814207 ATACTATGGGTATAA TAAGAACTATAATT AAA AGTTATGGTTCTTA TTTTTTTATATATTT TERM 1179 815305 - 815289 - g 77 -8.1 -3.75884 | opp_overlap 815289 815288 TCTCAAATAAATGAA GCTAAAA AAG TTTTAGC ATTTGAGGTAACTAA tyrS 814422 - 815642 + | tyrosyl-tRNA synthetase CPE0653 816062 - 816754 + | Ser/Thr protein phosphatase family protein TERM 1180 816852 - 816840 - f 72 -6.3 -4.48299 | overlap 816841 GGAGAGTTAAATAAA TCTCT CTA AGAGA GTTAGGAAATAGGTG relA 816873 - 817664 + | relA/spoT family protein TERM 1181 817689 - 817711 + F 91 -8.5 -4.99638 | overlap 817691 AAAAGTAGTTTTTAA TGCCACCTT ATTTA AAGGTGGTA TTTTTATATAGATAT TERM 1182 817691 - 817709 + F 82 -8.9 -4.11744 | overlap 817689 AAGTAGTTTTTAATG CCACCTT ATTTA AAGGTGG TATTTTTATATAGAT CPE0655 817937 - 818722 + | hypothetical protein TERM 1183 819095 - 819075 - g 78 -4 -5.47821 | ACGTAGTTAAAAAAA GCGTAACA AAATA TGCTACAC ATGTAAAACTTATGG TERM 1184 819508 - 819494 - g 72 -4.2 -5.05116 | opp_overlap 819495, overlap 819495 819498 CTAGAAACAATAAAA GCTACT CCA AGAAGC TGGGAGAGGGTTTCT CPE0656 818840 - 819955 + | hypothetical protein TERM 1185 820585 - 820569 - g 83 -6.6 -5.13741 | GTAAGCCAAGAAAAA TCCCAT GAAGT ATGGGA AGAGGTTTCTATAAG TERM 1186 821253 - 821238 - g 83 -3.2 -5.69262 | opp_overlap 821238 TTAGAAAAAGAAAAA GGGGAT GGAT ATACCC TTATGGATGGTTTGC CPE0657 819969 - 821306 + | hypothetical protein TERM 1187 821312 - 821359 + F 100 -9.5 -5.06585 | opp_overlap 821315 821317 821343, overlap 821315 821317 GGCTAGATAAAGTAA AAAGATAGCACATGTTGATTT AATTGA AAATCAATATGTGCTATATTG TTTTTATATGGTTTA TERM 1188 821315 - 821356 + F 100 -11.2 -4.59846 | opp_overlap 821315 821317 821343, overlap 821312 821317 TAGATAAAGTAAAAA GATAGCACATGTTGATTT AATTGA AAATCAATATGTGCTATA TTGTTTTTATATGGT TERM 1189 821356 - 821315 - f 100 -9 -5.07011 | opp_overlap 821315 821312 821317, overlap 821317 821343 TAGATAAAGTAAAAA GATAGCACATGTTGATTT AATTGA AAATCAATATGTGCTATA TTGTTTTTATATGGT TERM 1190 821354 - 821317 - f 100 -11.6 -4.13882 | opp_overlap 821315 821312 821317, overlap 821315 821343 GATAAAGTAAAAAGA TAGCACATGTTGATTT AATTGA AAATCAATATGTGCTA TATTGTTTTTATATG TERM 1191 821317 - 821354 + F 100 -13.8 -3.89226 | opp_overlap 821317 821315 821343, overlap 821315 821312 GATAAAGTAAAAAGA TAGCACATGTTGATTT AATTGA AAATCAATATGTGCTA TATTGTTTTTATATG CPE0658 821464 - 822855 + | hypothetical protein TERM 1192 822849 - 822874 + F 75 -7.1 -4.19746 | opp_overlap 822848 822849 ATTAAACAATCAAAT TACATAGTAAA AGTT TTTATTATGTA TTCTTTTAAAATACC TERM 1193 822926 - 822976 + F 88 -8.1 -4.84311 | opp_overlap 822926 TAAGGTTTAAATAAA TTCGACTAAAATA-TAAGAATAGTA AAT TGCTAG-CTTAGTATTTTAGTCGAA TTTTATTATGTAAGA TERM 1194 822976 - 822926 - f 72 -5.9 -4.43877 | opp_overlap 822926 TAAGGTTTAAATAAA TTCGACTAAAATA-TAAGAATAGTA AAT TGCTAG-CTTAGTATTTTAGTCGAA TTTTATTATGTAAGA CPE0659 823205 - 824698 + | hypothetical protein CPE0660 824764 - 825528 + | 4Fe-4S binding domain protein/radical SAM domain protein CPE0661 825828 - 826343 + | hypothetical protein TERM 1195 826437 - 826402 - T 81 -7.8 -4.42206 | opp_overlap 826402 826405, overlap 826405 AAGTAAATTAATAAA GAAGACTATATGAAGT TTTG ATTTCATATAGTCTTA TTTGTTTATAAATAT TERM 1196 826402 - 826437 + T 100 -10 -4.58085 | opp_overlap 826402 826405, overlap 826405 AAGTAAATTAATAAA GAAGACTATATGAAGT TTTG ATTTCATATAGTCTTA TTTGTTTATAAATAT TERM 1197 826434 - 826405 - T 89 -9.5 -4.30104 | opp_overlap 826402 826405, overlap 826402 TAAATTAATAAAGAA GACTATATGAAGT TTTG ATTTCATATAGTC TTATTTGTTTATAAA TERM 1198 826405 - 826434 + T 100 -11.7 -4.38748 | opp_overlap 826405 826402, overlap 826402 TAAATTAATAAAGAA GACTATATGAAGT TTTG ATTTCATATAGTC TTATTTGTTTATAAA CPE0662 827255 - 826452 - | hypothetical protein TERM 1199 827021 - 827034 + g 76 -5.3 -5.03994 | CATATTGAAGTCTTA TGCTA TCAC TAGCA TTTTTATATGTACAA TERM 1200 827526 - 827496 - R 85 -8.4 -4.56597 | opp_overlap 827496 TTTTTTCTTTAAAAA GCAAAAAACTCTAC TAA GGATAGTTTTTTGC TTTCACTTTTTATAT TERM 1201 827496 - 827526 + r 79 -8.4 -4.03989 | opp_overlap 827496 TTTTTTCTTTAAAAA GCAAAAAACTCTAC TAA GGATAGTTTTTTGC TTTCACTTTTTATAT CPE0663 828888 - 827578 - | F5/8 type C domain protein TERM 1202 829144 - 829169 + r 82 -10.6 -2.92157 | opp_overlap 829144, overlap 829146 829148 829150 GAGAAGATAAAAAAA TAGAGATGGA ATAAAA TCCATCTCTA TATGTAAAATTAATG TERM 1203 829169 - 829144 - R 100 -10.6 -5.84432 | opp_overlap 829144 829146 829148 829150 GAGAAGATAAAAAAA TAGAGATGGA ATAAAA TCCATCTCTA TATGTAAAATTAATG TERM 1204 829146 - 829167 + r 74 -8.8 -3.00994 | opp_overlap 829144, overlap 829144 829148 829150 GAAGATAAAAAAATA GAGATGGA ATAAAA TCCATCTC TATATGTAAAATTAA CPE0664 829951 - 829607 - | hypothetical protein TERM 1205 829969 - 830003 + H 76 -8.3 -3.68757 | opp_overlap 829968 829978, overlap 829964 GATCACCTACTTAAT TTTAATTAATTAATA ATTAA TATTAATTGATTAAA TTATATAATTTTAAA CPE0665 830406 - 831137 + | hypothetical protein CPE0666 831185 - 831457 + | transposase CPE0667 831468 - 831821 + | transposase TERM 1206 831820 - 831806 - gf 83 -2.1 -5.9873 | GTATTACAAAAAAAA CAGGT GGCAG ACCTA AATTTAAGTCTAAGA CPE0668 831763 - 832623 + | transposase CPE0669 832865 - 833872 + | hypothetical protein TERM 1207 833881 - 833918 + T 77 -7.3 -4.52047 | gap 2, opp_overlap 833874 833881, overlap 833876 AATGTAAAGTTTAAA GGTATCTAAACG--GAG TCAAAT CTCAGCGTTTAGATACC TTTTATAGTATAATA TERM 1208 833918 - 833881 - T 70 -7.3 -3.72765 | gap 2, opp_overlap 833881 833876, overlap 833874 AATGTAAAGTTTAAA GGTATCTAAACG--GAG TCAAAT CTCAGCGTTTAGATACC TTTTATAGTATAATA leuS 836468 - 834018 - | leucyl-tRNA synthetase TERM 1209 834457 - 834467 + g 70 -5.4 -4.56629 | AGTTTATCTGTATCA TCTG TAA CAGA TTTTATAGTATTATG TERM 1210 835269 - 835282 + g 81 -3.9 -5.64421 | opp_overlap 835269, overlap 835262 AAGACCCATTGAAGA TAGTT TTTC AACTA TTTTTTCTTTAGCCT TERM 1211 836571 - 836539 - R 100 -15.1 -5.88476 | opp_overlap 836538 AAAACAAATAAAAAA CCTTCCATCTCTTAA AAT TTAAGAGACGAAAGG ATATTCGCGGTACCA TERM 1212 837061 - 837104 + r 100 -14.3 -6.14618 | AAATAGTAAGTTTTA TATGCACTTAGTTTAAAGG GAATAA TCTTTAAACTAAGTGTATA TTTTTTTATTTTATC CPE0671 837803 - 837243 - | hypothetical protein TERM 1213 837914 - 837926 + H 88 -4.9 -5.98675 | TTAAAATGAAAACTG GAAAA TTA TTTTC TTTTTTCTTTTTGTA CPE0672 838095 - 838457 + | hypothetical protein TERM 1214 838470 - 838496 + F 90 -6.6 -5.71712 | opp_overlap 838470 TAATTTTTATGGAAA GGTTAGTAACAT TAA AAGTTGCTAGCC TTTTTTTATATAGAA birA 838662 - 839648 + | bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase CPE0674 839807 - 840892 + | HRDC domain protein CPE0675 840894 - 841061 + | hypothetical protein CPE0676 841162 - 841896 + | hypothetical protein TERM 1215 841925 - 841957 + F 71 -7.3 -3.95183 | ATATTTTTATTAGTT TATTCTTTATGTTTA TAC TAAAAATAAGGAATA TTATTATCTCTATAG TERM 1216 842132 - 842146 + G 74 -7.2 -3.90949 | TGGAAGCATTAGTGT TTGTTG TAT CAACAA TTCTATTTGCTGTTT CPE0677 842086 - 842391 + | hypothetical protein TERM 1217 842416 - 842443 + F 88 -6.4 -5.60993 | opp_overlap 842416 TAAATAAGTAAAAAG TAACAGGTTAGA TAGA TTAAACCTGTTA TTTTTTTATAAAGAA TERM 1218 842544 - 842526 - f 77 -7.6 -4.18024 | overlap 842524 AGAATAAATAAAATA TATTAACA AAA TGTTAATA ATACAACTTTCAATT dut 842638 - 843288 + | deoxyuridine 5`-triphosphate nucleotidohydrolase TERM 1219 843342 - 843390 + F 100 -10.7 -5.00412 | opp_overlap 843350, overlap 843350 TATAAATCGGAATAG TTAGGAAAGTTTTAGAATGAGAT AGG AACTTATTCTAAAGCTTTTTTAA TTTTTACTTATATTT TERM 1220 843350 - 843382 + F 100 -7.9 -5.54079 | opp_overlap 843350, overlap 843342 GGAATAGTTAGGAAA GTTTTAGAATGAGAT AGG AACTTATTCTAAAGC TTTTTTAATTTTTAC TERM 1221 843713 - 843696 - f 90 -11.3 -3.15758 | opp_overlap 843696 ATAAGTGTTTATTAA GCTTGCC TTAG GGCAAGC TTTTATTTTTTATAA TERM 1222 843696 - 843713 + F 100 -11.3 -5.49579 | opp_overlap 843696 ATAAGTGTTTATTAA GCTTGCC TTAG GGCAAGC TTTTATTTTTTATAA TERM 1223 844347 - 844361 + G 76 -6.4 -4.67353 | CTAATATAGTTTCTA GAGGAG GAT CTCTTC TTTTTGCATGGATGG thiC 843791 - 845101 + | thiamine biosynthesis protein ThiC TERM 1224 847557 - 847547 - g 78 -4 -5.34555 | opp_overlap 847547 GGAGATTATAAAAAA GTTA GAT TAAC TTTCCAAGAATATTT purL 845339 - 849139 + | phosphoribosylformylglycinamidine synthase purE 849450 - 849929 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1225 850433 - 850413 - g 70 -6.3 -4.17878 | overlap 850424 CTAAAGTAAATGAAA TTTTAAAAG AAG CTTTCAAAA AACAAAATATCAACT purC 849929 - 850636 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purF 850658 - 852103 + | amidophosphoribosyltransferase purM 852104 - 853105 + | phosphoribosylaminoimidazole synthetase purN 853093 - 853707 + | phosphoribosylglycinamide formyltransferase purH 853720 - 855225 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1226 856514 - 856497 - g 70 -4.2 -5.00138 | TAGGTAAAGGAAAAA CTTTAG AAGAAG CTAAAG AAAATGCATATAAAA purD 855632 - 856591 + | phosphoribosylamine-glycine ligase TERM 1227 857021 - 857001 - f 100 -11.3 -6.20267 | opp_overlap 857001 TCAAAAATAAAAAAA CTCTTAAAC TAA GTTTAAGAG TTTTGGTGCCGAAGA TERM 1228 857001 - 857021 + F 100 -11.3 -4.25104 | opp_overlap 857001 TCAAAAATAAAAAAA CTCTTAAAC TAA GTTTAAGAG TTTTGGTGCCGAAGA CPE0688 857504 - 857866 + | hypothetical protein TERM 1229 858837 - 858816 - g 76 -5.3 -5.15969 | gap 1, overlap 858818 TGTCAAGGTAAAAAA GATTTAGCTA CTT TAGCTAAA-C AATTAAACTTAGATG TERM 1230 858836 - 858818 - g 84 -9 -4.20888 | overlap 858816 TCAAGGTAAAAAAGA TTTAGCTA CTT TAGCTAAA CAATTAAACTTAGAT CPE0689 858399 - 858941 + | hypothetical protein TERM 1231 858985 - 858948 - T 100 -14.5 -4.56133 | opp_overlap 858953, overlap 858953 TTTGAATAATTAAAA TAAAAGATGATTTCTAC ATTT GTAGAAATCATCTTTTT TACTTTAATCTATAT TERM 1232 858953 - 858980 + T 100 -14.4 -5.40004 | opp_overlap 858953 858948 ATAATTAAAATAAAA GATGATTTCTAC ATTT GTAGAAATCATC TTTTTTACTTTAATC TERM 1233 858980 - 858953 - T 100 -14.4 -5.19998 | opp_overlap 858953, overlap 858948 ATAATTAAAATAAAA GATGATTTCTAC ATTT GTAGAAATCATC TTTTTTACTTTAATC argH 860474 - 859074 - | argininosuccinate lyase TERM 1234 860503 - 860528 + r 77 -7.1 -4.43681 | gap 1, opp_overlap 860511 CATTTATATAGTATG TTAGAGCATAAA ATA TTTA-GCTCTAA TTTTAATATTAGCTA argG 861785 - 860568 - | argininosuccinate synthase TERM 1235 862647 - 862626 - g 77 -4.5 -5.186 | TAAAATACATAAAAA CATAGTTAT AAAA ATACCTATG TGTGAAGAAGGTTTA CPE0692 862390 - 863037 + | putative translaldolase TERM 1236 863123 - 863155 + F 100 -16.7 -4.32049 | opp_overlap 863115 863128 863131, overlap 863128 TCAACAATTAACCCT TAAAAGAACTATCTA ATT TAGATAGTTCTTTTA TTTTGGTAGATTATC TERM 1237 863128 - 863150 + F 100 -12.2 -5.13722 | opp_overlap 863128 863131, overlap 863123 AATTAACCCTTAAAA GAACTATCTA ATT TAGATAGTTC TTTTATTTTGGTAGA TERM 1238 863150 - 863128 - f 100 -12.2 -4.15508 | opp_overlap 863128 863123, overlap 863131 AATTAACCCTTAAAA GAACTATCTA ATT TAGATAGTTC TTTTATTTTGGTAGA TERM 1239 863147 - 863131 - f 80 -8.1 -4.19577 | opp_overlap 863128 863123, overlap 863128 TAACCCTTAAAAGAA CTATCTA ATT TAGATAG TTCTTTTATTTTGGT TERM 1240 863266 - 863290 + F 100 -10.2 -5.38054 | opp_overlap 863266 GTATTATATGAAAAA GAGTTATCTA AAGAA TAGATAACTC TTTTTATTTATAAAA TERM 1241 863290 - 863266 - f 100 -10.2 -4.82667 | opp_overlap 863266 GTATTATATGAAAAA GAGTTATCTA AAGAA TAGATAACTC TTTTTATTTATAAAA CPE0693 863437 - 868497 + | hypothetical protein TERM 1242 868542 - 868575 + F 100 -11.3 -5.14698 | opp_overlap 868542 GTAAATTTTAAGAAA GTAGTATAAGATTTT ATAT AGAGTCTTATACTAC TTTTGTTTTAAATTT TERM 1243 868575 - 868542 - f 73 -6.9 -4.23104 | opp_overlap 868542 GTAAATTTTAAGAAA GTAGTATAAGATTTT ATAT AGAGTCTTATACTAC TTTTGTTTTAAATTT TERM 1244 868856 - 868879 + F 87 -6.8 -5.44721 | TTATAATTTATTTGA TAGAACTCAT TAAA GTGGGTTCTA TTTTTTTGCAATAGT CPE0694 868969 - 869982 + | 3-deoxy-7-phosphoheptulonate synthase TERM 1245 869995 - 870024 + F 93 -10.2 -4.06904 | opp_overlap 869995 TAGAATATTATTTAA TTTAGTGGGAGT GTTTAA ACTCCCATTAAA TTTATACTTAAATAG TERM 1246 870421 - 870431 + G 74 -5.4 -5.00884 | GACCTTGCAGGTTTT GTTG CCT CAAC TTTTTTAAGAGGAAT aroB 870079 - 871131 + | 3-dehydroquinate synthase TERM 1247 871445 - 871459 + G 70 -6.4 -4.1774 | opp_overlap 871443 871445, overlap 871447 CACCTTCTAAAAGTA TGGCTC ATA GAGCTA TTATTTGTGCTTCTT aroA 871378 - 872652 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroC 872716 - 873789 + | chorismate synthase CPE0698 873958 - 874251 + | chorismate mutase TERM 1248 874659 - 874671 + G 75 -4.8 -5.01845 | AATTACTACTAATTT TGCC ATAAG GGCA TTTTTAATTGTTGTA CPE0699 874579 - 874731 + | hypothetical protein TERM 1249 874829 - 874804 - f 82 -8.4 -4.43272 | opp_overlap 874804 874806 ATTTAAAATGTAAAA GACACCTAGT AGGGTA ACTAAGTGTC TTACATGAACTTGTG TERM 1250 875166 - 875177 + G 74 -3 -5.36441 | opp_overlap 875176, overlap 875176 ATAATAATATAGATG GATT ATAT AATC TTTTTTCTGTAAAAA TERM 1251 875850 - 875837 - g 72 -5.3 -4.72029 | TGGAATGGAATAAAA GTAGA TAAG TCTAC AGAAGAAGAGATATA aroE 875075 - 875890 + | shikimate 5-dehydrogenase aroK 876144 - 876659 + | shikimate kinase aroQ 876855 - 877295 + | 3-dehydroquinate dehydratase TERM 1252 877588 - 877578 - g 91 -4 -6.09888 | opp_overlap 877578 TTTTAAGAAAAAAAA CTTT CCA AAAG ATTATAATGATTTTG TERM 1253 877698 - 877681 - g 72 -4.3 -5.15167 | opp_overlap 877681 TATGATGAAGAAAAA TATAAAT ATGA ATTTATA TATTTTGAGGTTTAT CPE0703 877378 - 877893 + | hypothetical protein TERM 1254 877932 - 877902 - f 70 -4.1 -5.10767 | opp_overlap 877905, overlap 877905 877907 TAGTTAATATAAAAA GAAGTTGTATTCT TATTT AGAATACAGCTTT TTTTTATTATGTTTT TERM 1255 877929 - 877905 - f 71 -5.8 -4.63863 | opp_overlap 877905, overlap 877902 877907 TTAATATAAAAAGAA GTTGTATTCT TATTT AGAATACAGC TTTTTTTTATTATGT TERM 1256 877905 - 877929 + F 100 -8 -6.19302 | opp_overlap 877905 877902 877907 TTAATATAAAAAGAA GTTGTATTCT TATTT AGAATACAGC TTTTTTTTATTATGT TERM 1257 877954 - 877998 + F 100 -19.1 -3.50853 | opp_overlap 877957 877959 877966, overlap 877966 TTATGTTTTTGTGAA TTATACCATAAAGTATTCTAT ACT ATAGAGTACTTTGTGGTATAA TTATACTTGGGAGGG TERM 1258 877995 - 877957 - f 88 -12 -2.70932 | opp_overlap 877954 877966, overlap 877959 877966 TGTTTTTGTGAATTA TACCATAAAGTATTCTAT ACT ATAGAGTACTTTGTGGTA TAATTATACTTGGGA TERM 1259 877993 - 877959 - f 80 -10.2 -2.90075 | opp_overlap 877954 877966, overlap 877957 877966 TTTTTGTGAATTATA CCATAAAGTATTCTAT ACT ATAGAGTACTTTGTGG TATAATTATACTTGG TERM 1260 877966 - 877986 + F 77 -7.7 -4.04149 | opp_overlap 877966 877959 877957, overlap 877954 GAATTATACCATAAA GTATTCTAT ACT ATAGAGTAC TTTGTGGTATAATTA TERM 1261 878322 - 878332 + G 72 -2.6 -5.40072 | opp_overlap 878322 GGAATTTCTAAAGAG TATT ATG AATA TTTTTTTGGGGGGAG CPE0704 878020 - 878352 + | 30S ribosomal protein CPE0705 878354 - 879211 + | hypothetical protein TERM 1262 879366 - 879318 - f 74 -4.9 -5.10163 | opp_overlap 879324, overlap 879324 AAGTTGAAAATAAAA GTATAAGTTAATACTTTATTC TTGATTT GAATAAAGTATTAACTTTTTT TATTTGGTATTTATG TERM 1263 879360 - 879324 - f 95 -12.7 -3.79451 | opp_overlap 879324, overlap 879318 AAAATAAAAGTATAA GTTAATACTTTATTC TTGATTT GAATAAAGTATTAAC TTTTTTTATTTGGTA TERM 1264 879324 - 879360 + F 100 -12.7 -5.99154 | opp_overlap 879324 879318 AAAATAAAAGTATAA GTTAATACTTTATTC TTGATTT GAATAAAGTATTAAC TTTTTTTATTTGGTA CPE0706 879423 - 880265 + | hypothetical protein CPE0707 880391 - 881281 + | ABC transporter CPE0708 881283 - 882494 + | hypothetical protein cbh 882605 - 883594 + | choloylglycine hydrolase TERM 1265 884281 - 884312 + F 100 -18.2 -5.87996 | opp_overlap 884281 TGGTACCGCGAAGTA GTTCCTTCGTCCCT TTTT AGGGATGAAGGAAC TTTTTTTATTAATTA TERM 1266 884312 - 884281 - f 100 -16 -2.72344 | opp_overlap 884281 TGGTACCGCGAAGTA GTTCCTTCGTCCCT TTTT AGGGATGAAGGAAC TTTTTTTATTAATTA TERM 1267 884813 - 884791 - g 70 -8.6 -2.6078 | AGGAACAGCAACTCA CTTTGTACTT AAA AAATACAAAG ATCATGGAACAATAT CPE0710 884390 - 884872 + | AsnC family transcriptional regulator aspC 884869 - 886047 + | aspartate aminotransferase TERM 1268 886064 - 886096 + F 95 -8.5 -5.09426 | TAAATCTTTTTAATA GGTAGTAGAGGCTTA AAT TTAGCTTTTACTGCC TTTTTTAACGTTAAA CPE0712 886162 - 887187 + | hypothetical protein TERM 1269 887195 - 887237 + T 100 -18.9 -5.01553 | opp_overlap 887195 TAAGTTAATAAGAAA GACTATCTAAACACATTAA TATTT TTAGTGTGTTTAGATAGTC TTTTGTTTATAAATT TERM 1270 887237 - 887195 - T 100 -16.7 -4.4846 | opp_overlap 887195 TAAGTTAATAAGAAA GACTATCTAAACACATTAA TATTT TTAGTGTGTTTAGATAGTC TTTTGTTTATAAATT CPE0713 887708 - 887244 - | hypothetical protein CPE0714 888909 - 887767 - | hypothetical protein TERM 1271 887881 - 887893 + g 71 -4.9 -4.83615 | TTGAGATGATACGAT TTTCT CAT AGAAA TTTTTATCAGAAATA TERM 1272 888320 - 888336 + g 81 -5.9 -5.27938 | opp_overlap 888320 TTGTCTTTTTTAAGA GCTAAGT TAA ATTTAGC TTTTTCTTTAGGAGT TERM 1273 888655 - 888669 + g 74 -2.2 -5.58179 | opp_overlap 888652, overlap 888652 888657 ATAAAAAGAATTTAA TTTATA AAT TATAGA TTTTTTATTATGATC CPE0715 889388 - 889903 + | GNAT family acetyltransferase sigW 890124 - 890642 + | RNA polymerase ECF-type sigma factor CPE0717 890718 - 892130 + | hypothetical protein TERM 1274 892133 - 892179 + F 100 -11.3 -4.48221 | gap 1, opp_overlap 892128 892141 892143, overlap 892123 892143 892173 AGATTTAAAATAATT TTATTAAATAGCCAGAGAGTTT TTTA AAATTCTCTGGCT-TTTCATAA TTTTATGAATTAATA TERM 1275 892172 - 892141 - f 79 -8.8 -3.77607 | opp_overlap 892133 892143, overlap 892128 892143 AATAATTTTATTAAA TAGCCAGAGAGTTT TTTA AAATTCTCTGGCTT TTCATAATTTTATGA TERM 1276 892143 - 892170 + F 100 -13.6 -4.43571 | opp_overlap 892141 892128 892143, overlap 892133 TAATTTTATTAAATA GCCAGAGAGTTT TTTA AAATTCTCTGGC TTTTCATAATTTTAT TERM 1277 892170 - 892143 - f 93 -11.4 -3.46534 | opp_overlap 892143 892133, overlap 892141 892128 TAATTTTATTAAATA GCCAGAGAGTTT TTTA AAATTCTCTGGC TTTTCATAATTTTAT CPE0718 892351 - 893553 + | DHHA1 domain protein TERM 1278 894377 - 894366 - g 72 -4.4 -5.06585 | TAAATTAGATAAAAA GCTT AAAG AAGC TATAGAAAAAGAATT CPE0719 893608 - 894612 + | capsular polysaccharide biosynthesis protein TERM 1279 894656 - 894646 - f 70 -4 -5.22137 | opp_overlap 894620, overlap 894620 AAGGATAAAAGAAAA TGTT ATT AACA AAAAATTAACAATAT TERM 1280 895451 - 895425 - g 70 -5.3 -4.60143 | opp_overlap 895444, overlap 895444 ATATAGCAGATAAAA TATTAGAAGTT GGACA AACTACTAATA GAGTATTTTCAGGCT TERM 1281 895565 - 895581 + G 86 -9.5 -4.02979 | TTCTTAATAAGTGTT CTTGTTG GTA CAACAAG TTTAATTCCTATTTT CPE0720 894764 - 895939 + | hypothetical protein TERM 1282 896215 - 896251 + F 100 -8.9 -5.86609 | opp_overlap 896218 TATTAACTTTTGATA GAAGGCATTATTTTAAG TTA CTTGATATAATTCCTTC TTTTTATTTTTTTGC CPE0721 896376 - 897233 + | zinc transporter ZupT TERM 1283 897245 - 897278 + F 73 -4.6 -5.23396 | opp_overlap 897239 897245 ATAGATTAATTTAAA CCTTCGTTGATTTA AAGAGC TATTTCAACGGAGG TTTTTATTCATTATT CPE0722 897523 - 898185 + | DeoR family transcriptional regulator CPE0723 898316 - 899104 + | HAD hydrolase, IIB family TERM 1284 899116 - 899135 + F 86 -4.3 -5.83211 | opp_overlap 899116 ATAGAATTAATTAGA GAGTTGT ATTAAA GCAACTC TTTTTTATTTTAATA TERM 1285 899256 - 899233 - f 93 -9.8 -3.98107 | opp_overlap 899233, overlap 899226 899236 TATGAAAATTAAGAA TAATAGTAGT GTTT ACTACTATTA TTTTTTTTATATTTA TERM 1286 899233 - 899256 + F 100 -9.8 -6.15717 | opp_overlap 899233 899226 899236 TATGAAAATTAAGAA TAATAGTAGT GTTT ACTACTATTA TTTTTTTTATATTTA TERM 1287 899253 - 899236 - f 73 -7.1 -4.0911 | opp_overlap 899233, overlap 899233 899226 GAAAATTAAGAATAA TAGTAGT GTTT ACTACTA TTATTTTTTTTATAT splB 899303 - 900331 + | spore photoproduct lyase TERM 1288 900434 - 900475 + F 83 -6.3 -5.29846 | gap 1, opp_overlap 900439, overlap 900428 900455 ATCTTGAAGTTTTAA GAAAATTATTTTCAATAAAT TTT ATTTGC-GAAAATAATTTTC TTTTTATTTAGAGTT TERM 1289 900455 - 900470 + F 73 -3.4 -5.48028 | overlap 900434 TATTTTCAATAAATT TTATTT GCGA AAATAA TTTTCTTTTTATTTA TERM 1290 900736 - 900695 - f 100 -11.3 -3.84017 | opp_overlap 900700 900701 900733, overlap 900701 900732 CAATGTTAAATATAA GAAAAATATTTTCAAATTA TTCT TATTTTGAAAATACTTTTC ATAAAAATGAAATAT TERM 1291 900730 - 900701 - f 87 -6.7 -5.33331 | opp_overlap 900701 900700, overlap 900695 TAAATATAAGAAAAA TATTTTCAAATTA TTCT TATTTTGAAAATA CTTTTCATAAAAATG nanI 900997 - 903081 + | exo-alpha-sialidase CPE0726 903129 - 904283 + | hypothetical protein CPE0727 904693 - 905499 + | hypothetical protein CPE0728 905664 - 905942 + | hypothetical protein CPE0729 905890 - 906390 + | hypothetical protein CPE0730 906584 - 907048 + | hypothetical protein TERM 1292 907059 - 907089 + F 91 -7 -5.54885 | opp_overlap 907055, overlap 907055 AATAAAAATTATTAA CACTTAAGTTTATT GTA AATGGGCTTAGGTG TTTTTTATTAGTATT CPE0731 907404 - 907580 + | hypothetical protein TERM 1293 908148 - 908164 + G 70 -8.1 -3.06492 | opp_overlap 908160 ATAAATTTAGGCTTT GTAACAA AAA TTGTTAC TGTTAACCTAAATAA CPE0732 907833 - 908408 + | hypothetical protein TERM 1294 908459 - 908418 - T 79 -8.2 -4.04141 | opp_overlap 908423, overlap 908423 GAATAAGGAATCAAA TAAAAGTCAAGGTAAGCT AAATTA AACTTGCCTTGACTTTTT ATAATTAAATAATAA TERM 1295 908423 - 908454 + T 91 -8.1 -4.98857 | opp_overlap 908418 908423 AGGAATCAAATAAAA GTCAAGGTAAGCT AAATTA AACTTGCCTTGAC TTTTTATAATTAAAT TERM 1296 908454 - 908423 - T 91 -8.1 -5.00851 | opp_overlap 908423, overlap 908418 AGGAATCAAATAAAA GTCAAGGTAAGCT AAATTA AACTTGCCTTGAC TTTTTATAATTAAAT TERM 1297 908612 - 908639 + T 73 -2.8 -5.81032 | TTATTTATCTGAAAA GATGTTTTTATT TAAT AGCAAAAGCATC TTTTTTTTGAGGTTA CPE0733 909519 - 908623 - | LysR family transcriptional regulator naoX 909869 - 911569 + | pyridine nucleotide-disulphide oxidoreductase family protein TERM 1298 911612 - 911576 - f 81 -9.1 -3.889 | gap 1, overlap 911578 911580 TTTAATTAGAGTAAA TAC-ATGGTGTTTTAA TTAATT TTAAAACACCATAGTA AAAAATAATATTATT TERM 1299 911609 - 911578 - f 83 -9.7 -3.52849 | overlap 911576 911580 TAATTAGAGTAAATA CATGGTGTTTTAA TTAATT TTAAAACACCATA GTAAAAAATAATATT TERM 1300 911607 - 911580 - f 87 -10.1 -3.32803 | overlap 911578 911576 ATTAGAGTAAATACA TGGTGTTTTAA TTAATT TTAAAACACCA TAGTAAAAAATAATA TERM 1301 911659 - 911638 - f 70 -3.1 -5.3104 | opp_overlap 911641, overlap 911641 TTATTAAAAATAAAA TAGTTTGTT AATT AACAAATTA ATAGGGGGAATTAAG CPE0735 911675 - 912961 + | YeeE/YedE family protein TERM 1302 912983 - 913020 + F 76 -5.9 -4.88795 | gap 1, opp_overlap 912983 913000 913005, overlap 912972 913000 AAAATAGTTTAAAAA GCTATAATTGGTTAATAT AAA ATAA-AACTAATTATAGC TTTATTTTCTTAAAT CPE0736 913050 - 914381 + | amino acid ABC transporter permease CPE0737 915202 - 914540 - | putative fibronectin-binding protein TERM 1303 915296 - 915331 + r 80 -9.3 -3.19285 | opp_overlap 915296, overlap 915294 915292 AACTAAAATAAAAAA TGATTATTATTACTC AAAGTA GAGAAATAATAATCA TCTATATTTAAAATG TERM 1304 915331 - 915296 - R 100 -9.3 -5.85244 | opp_overlap 915296 915294 915292 AACTAAAATAAAAAA TGATTATTATTACTC AAAGTA GAGAAATAATAATCA TCTATATTTAAAATG CPE0738 915755 - 915477 - | hypothetical protein TERM 1305 915538 - 915555 + g 74 -7.1 -3.89614 | opp_overlap 915537 915538 TTCTCAGAAAGAAAG TACTCTT TTGC AAGAGTA TTTATGGAGGTTCCG TERM 1306 915894 - 915868 - H 75 -6.6 -4.42062 | opp_overlap 915873 915875 TAGGCTCCAAACAAA GCATAGCTTACT CTT AGTAATCTTTGC AAGGAGCAAGATGAT CPE0739 916103 - 916420 + | thioredoxin TERM 1307 916980 - 916944 - g 93 -5.6 -5.71983 | gap 2, opp_overlap 916944 916958, overlap 916947 TTAATGATAAAAAAA CTATAAATAATATAGTTG AAT CAACT-TATTATTTA-AG TGAATCTGGGATGTT TERM 1308 916978 - 916947 - g 74 -8.4 -3.5694 | gap 1, opp_overlap 916944 916958, overlap 916944 ATGATAAAAAAACTA TAAATAATATAGTTG AAT CAACT-TATTATTTA AGTGAATCTGGGATG CPE0740 916727 - 917059 + | hypothetical protein CPE0741 917086 - 918297 + | cytochrome C-type biogenesis protein TERM 1309 918638 - 918582 - f 74 -8.5 -3.38158 | opp_overlap 918582 918587 918627, overlap 918587 ATCAAAACAATTTAA TAAAACCTATATATTATGATAATAAAA ATT TTTTATAAGTATAATTTATAGGTTTTA TAATTGAGTTTTGGT TERM 1310 918582 - 918638 + F 82 -10.7 -2.84988 | opp_overlap 918582 918587, overlap 918587 918627 ATCAAAACAATTTAA TAAAACCTATATATTATGATAATAAAA ATT TTTTATAAGTATAATTTATAGGTTTTA TAATTGAGTTTTGGT TERM 1311 918587 - 918633 + F 74 -6.2 -4.56093 | opp_overlap 918582 918587, overlap 918582 918627 AACAATTTAATAAAA CCTATATATTATGATAATAAAA ATT TTTTATAAGTATAATTTATAGG TTTTATAATTGAGTT TERM 1312 919833 - 919811 - g 75 -9.3 -2.92168 | opp_overlap 919808 TTAAAAGAAAATTTA CCATGTATA GTTTA TATACATGG AGGTGCATTTATTGG lipB 918827 - 920548 + | lipase TERM 1313 921906 - 921893 - g 81 -8.1 -4.27796 | CAAGAAATTTTAAAA GCTGG AGGA CCAGC CACTGTAGTTAATAC cstA 921005 - 922456 + | carbon starvation protein CstA TERM 1314 922483 - 922518 + F 95 -9.9 -4.30043 | opp_overlap 922481 922485, overlap 922482 922485 GTTAATAATAAAACT AAGAGGGGATTATGA AAAAAC TCATAATTCCCTCTA TTATTTTAAATTTAT TERM 1315 922485 - 922516 + F 95 -12.5 -3.73132 | opp_overlap 922481 922485, overlap 922483 922482 TAATAATAAAACTAA GAGGGGATTATGA AAAAAC TCATAATTCCCTC TATTATTTTAAATTT TERM 1316 922516 - 922485 - f 100 -11 -3.87952 | opp_overlap 922485 922483 922482, overlap 922481 TAATAATAAAACTAA GAGGGGATTATGAA AAAA CTCATAATTCCCTC TATTATTTTAAATTT CPE0744 922600 - 922902 + | hypothetical protein TERM 1317 922922 - 922976 + T 89 -9.7 -4.30885 | opp_overlap 922922, overlap 922925 922975 AGAACATATAGAAAT TGGTTGAGACTATAGAAAGTTTT GTTTTATGG AAAGCTTACTATAGTCTCAATTA TTTTGAATATATTTT TERM 1318 922925 - 922973 + T 100 -11.4 -4.24602 | opp_overlap 922922, overlap 922922 ACATATAGAAATTGG TTGAGACTATAGAAAGTTTT GTTTTATGG AAAGCTTACTATAGTCTCAA TTATTTTGAATATAT CPE0745 923544 - 922990 - | hypothetical protein TERM 1319 924558 - 924536 - g 73 -9.2 -2.6857 | overlap 924535 ATAATAACTCATAAC TCAGCAATAG CAC CTATGGCTGA CAAGGTTATTAAGAT CPE0746 923942 - 924643 + | ABC transporter ATP-binding protein TERM 1320 926698 - 926686 - g 70 -6.3 -4.17048 | opp_overlap 926694, overlap 926694 TTCTTCCTAAAATAA TAAGC AAT GCTTA TACAAGTGTATATGC CPE0747 924660 - 928058 + | hypothetical protein TERM 1321 928085 - 928135 + F 78 -5.9 -5.01422 | gap 1, opp_overlap 928091 928096, overlap 928091 928096 GGATGTATTAAGGTA TAAAAATAAAACTTACAAACA-TA TTCA TACTGTTTGTAAGTTTTATTAATG TTTATTTTTGTATAC TERM 1322 928091 - 928129 + F 95 -11.5 -3.61428 | gap 1, opp_overlap 928091 928096, overlap 928085 928096 ATTAAGGTATAAAAA TAAAACTTACAAACA-TA TTCA TACTGTTTGTAAGTTTTA TTAATGTTTATTTTT TERM 1323 928129 - 928091 - f 100 -11.5 -4.92314 | gap 1, opp_overlap 928085 928091 928096, overlap 928096 ATTAAGGTATAAAAA TAAAACTTACAAACA-TA TTCA TACTGTTTGTAAGTTTTA TTAATGTTTATTTTT TERM 1324 928124 - 928096 - f 90 -7 -5.35224 | gap 1, opp_overlap 928091 928085 928096, overlap 928091 GGTATAAAAATAAAA CTTACAAACA-TA TTCA TACTGTTTGTAAG TTTTATTAATGTTTA TERM 1325 928096 - 928124 + F 81 -7 -4.81163 | gap 1, opp_overlap 928096 928091, overlap 928091 928085 GGTATAAAAATAAAA CTTACAAACA-TA TTCA TACTGTTTGTAAG TTTTATTAATGTTTA CPE0748 928284 - 928649 + | hypothetical protein TERM 1326 928675 - 928698 + F 87 -6.1 -5.6473 | opp_overlap 928675 ATGATAAATATAAGA TCTTAATCC TTAATT GGGTTAAGA TTTTTTTAGTATTAT TERM 1327 929445 - 929459 + G 71 -2.2 -5.48825 | opp_overlap 929436, overlap 929436 AGTATATAAATATTG TATTTA ATT TAAGTA TTTTTTTAGGTGATG CPE0749 928856 - 929869 + | hypothetical protein CPE0750 929956 - 930366 + | hypothetical protein CPE0751 930503 - 930673 + | hypothetical protein TERM 1328 930819 - 930789 - f 88 -5 -5.90231 | gap 1, opp_overlap 930789 ATAAATATAAAAAAA TAATCAGCA-ATT ATGATA AATATGCTGATTA TTTTTATAAGATCTT TERM 1329 930789 - 930819 + F 70 -5 -4.87273 | gap 1, opp_overlap 930789 ATAAATATAAAAAAA TAATCAGCA-ATT ATGATA AATATGCTGATTA TTTTTATAAGATCTT CPE0752 930915 - 931253 + | hypothetical protein CPE0753 931305 - 932249 + | hypothetical protein TERM 1330 932310 - 932359 + T 75 -9.7 -2.54841 | opp_overlap 932311 932314 932315 932338 932348, overlap 932309 932307 CCTTGGAATTAAAAA ATAATTTTATAGGATTCTTTTGA ATAA TTAAAAGAATCCTATAAAGATAG ATACTTTTATTAAGC TERM 1331 932358 - 932311 - T 100 -8.8 -5.26875 | opp_overlap 932310 932309 932307, overlap 932314 932315 932338 932348 CTTGGAATTAAAAAA TAATTTTATAGGATTCTTTTGA ATAA TTAAAAGAATCCTATAAAGATA GATACTTTTATTAAG TERM 1332 932355 - 932314 - T 100 -10.5 -4.72473 | opp_overlap 932310 932309 932307, overlap 932311 932315 932338 932348 GGAATTAAAAAATAA TTTTATAGGATTCTTTTGA ATAA TTAAAAGAATCCTATAAAG ATAGATACTTTTATT TERM 1333 932354 - 932315 - T 100 -14 -3.41857 | opp_overlap 932310 932309 932307, overlap 932314 932311 932338 932348 GAATTAAAAAATAAT TTTATAGGATTCTTTTGA ATAA TTAAAAGAATCCTATAAA GATAGATACTTTTAT clsC 933843 - 932386 - | cardiolipin synthetase TERM 1334 934059 - 934039 - H 81 -7 -4.73432 | overlap 934035 934049 CTAAAGATAAATAAA CTAGTATA ATTTA TATACTAG ATATAAGGAGTAAAG TERM 1335 934248 - 934231 - g 70 -4.1 -4.96501 | overlap 934232 CCTGATAAAAATAAA GTGTTGC TTAT GCAACAG TATGGAAGAAAAGAT TERM 1336 934247 - 934232 - g 72 -7.6 -3.56816 | overlap 934231 CTGATAAAAATAAAG TGTTGC TTAT GCAACA GTATGGAAGAAAAGA CPE0755 934078 - 934572 + | hypothetical protein TERM 1337 934652 - 934622 - T 100 -15.8 -5.22481 | opp_overlap 934622 TATAAAGAAATAAAA TTAAGGATATACTT TTA AAGTATATCCTTAA TTTATATGGTGACTA TERM 1338 934622 - 934652 + T 100 -15.8 -4.0942 | opp_overlap 934622 TATAAAGAAATAAAA TTAAGGATATACTT TTA AAGTATATCCTTAA TTTATATGGTGACTA CPE0756 935927 - 934665 - | cytosine deaminase CPE0757 936375 - 937130 + | creatinase CPE0758 937179 - 938105 + | hypothetical protein TERM 1339 938179 - 938134 - T 100 -12.3 -4.68103 | opp_overlap 938136, overlap 938136 TTAATTGTAATAAAA TATGGACTATATAAAAATTGT TTGT AGAATTTTTATATAGTCCATT TTAATATTTTAAATA TERM 1340 938177 - 938136 - T 100 -14.9 -3.9504 | opp_overlap 938136, overlap 938134 AATTGTAATAAAATA TGGACTATATAAAAATTGT TTGT AGAATTTTTATATAGTCCA TTTTAATATTTTAAA TERM 1341 938136 - 938177 + T 100 -14.9 -4.55826 | opp_overlap 938134 938136 AATTGTAATAAAATA TGGACTATATAAAAATTGT TTGT AGAATTTTTATATAGTCCA TTTTAATATTTTAAA CPE0759 939430 - 938231 - | hypothetical protein TERM 1342 938280 - 938266 - G 70 -4.4 -4.86939 | TAAGAAATTCAAAAA TTAATA TGC TATTAA AAAGTTCTAAGTCAG TERM 1343 938315 - 938327 + g 72 -4.9 -5.00339 | opp_overlap 938313 AGCATCATCTAAATC TCTTT GCA AAAGA TTTTTAATTGTTGAT def 939619 - 940029 + | peptide deformylase TERM 1344 940164 - 940199 + T 87 -10.1 -3.33798 | opp_overlap 940169, overlap 940169 GAATAAATTTTGATT TGAAAGATATACTTA TTAATT TAAGTATATCTTTTA TTAATATAGTATTTA TERM 1345 940169 - 940194 + T 86 -7.8 -4.76075 | opp_overlap 940169, overlap 940164 AATTTTGATTTGAAA GATATACTTA TTAATT TAAGTATATC TTTTATTAATATAGT TERM 1346 940194 - 940169 - T 72 -7.8 -3.60475 | opp_overlap 940164 940169 AATTTTGATTTGAAA GATATACTTA TTAATT TAAGTATATC TTTTATTAATATAGT gltT 941627 - 940362 - | proton/sodium- glutamate symport protein TERM 1347 941891 - 941879 - R 85 -6.3 -5.47218 | opp_overlap 941879 GCTGACTTAAAAAAA TGCAA GTT TTGCA TTAATAAATAGAATA TERM 1348 942189 - 942162 - R 100 -13 -4.33907 | opp_overlap 942162 TACAAATATTTAAAA GGTATAGAATTA GATC TAATTCTATACC TTTTTGTTATTATTT TERM 1349 942162 - 942189 + r 100 -13 -5.40014 | opp_overlap 942162 TACAAATATTTAAAA GGTATAGAATTA GATC TAATTCTATACC TTTTTGTTATTATTT CPE0762 942895 - 942203 - | HAD superfamily (subfamily IA) hydrolase TERM 1350 943015 - 943052 + H 73 -8.9 -2.83519 | opp_overlap 943012 943010 943038, overlap 943013 943010 ATTATTAAAGTAGTT TTTTATTTATATATATT TACA AATTTATATAAATAAAA TAATATATTTGTAAA TERM 1351 943072 - 943056 - H 71 -5.3 -4.60302 | opp_overlap 943010, overlap 943010 ATATAAATAAAATAA TATATTT GTA AAATATA ACACTTAAGCTATAT CPE0763 943121 - 944074 + | hypothetical protein CPE0764 944938 - 944309 - | hypothetical protein TERM 1352 945561 - 945549 - g 89 -3.5 -6.04378 | AAAGTAGAAAAAAAA TTAAT AGA ATTAA AAGATGAAGCATATT CPE0765 945090 - 945893 + | transcriptional regulator TERM 1353 946010 - 945983 - T 100 -10.1 -5.10601 | opp_overlap 945988 AGAAAAGGATAAAAA TATAACTGGAA ATAAAA TTCCAGTTATA TAACCAGGGTATTAA CPE0766 947447 - 946053 - | hypothetical protein CPE0767 948767 - 947568 - | IS1136 transposase TERM 1354 948684 - 948703 + g 89 -9.4 -4.30559 | opp_overlap 948688 ATAGATAAATCTTGA TACACCAA TAGT TTGGTGTA TTTTAGACTTTTGTT CPE0768 949320 - 949475 + | hypothetical protein TERM 1355 949491 - 949513 + F 100 -15 -5.56264 | TTTTGAAGTGTTATA GGCTGTAGTT TTA AACTACAGCC TTTTTTATATTTCCA gutA 949815 - 951179 + | sugar transport protein TERM 1356 951322 - 951357 + T 100 -9.9 -5.61881 | opp_overlap 951322 TAAAAGATTTAAAAA GTATAACAGAGGTTT TAATTT ACGCCTCTGTTATAC TTTTTATTTTTGAAA TERM 1357 951357 - 951322 - T 86 -7.8 -4.80396 | opp_overlap 951322 TAAAAGATTTAAAAA GTATAACAGAGG TTTTAATTTACG CCTCTGTTATAC TTTTTATTTTTGAAA CPE0770 952241 - 951402 - | transcriptional regulator TERM 1358 953547 - 953524 - g 81 -8.4 -4.0942 | opp_overlap 953530, overlap 953530 TAGGTATGAGAGAAA TTAAAATAGA GAAT TCTATTTTAA AAATTAATAATAAAA bgaL 952605 - 955634 + | beta-galactosidase TERM 1359 955709 - 955666 - T 100 -14.2 -4.18164 | opp_overlap 955667, overlap 955667 955694 955707 AATTTTTTAAAATAA TTGCTGTCTTATATAGTGCT TGAA AACACTATATAAAACAGCAT TTTTTATAGAATAAA TERM 1360 955667 - 955708 + T 100 -13.3 -5.26316 | opp_overlap 955666 955667 955694 955707 ATTTTTTAAAATAAT TGCTGTCTTATATAGTGCT TGAA AACACTATATAAAACAGCA TTTTTTATAGAATAA TERM 1361 955708 - 955667 - T 100 -17.7 -3.10175 | opp_overlap 955667, overlap 955666 955694 955707 ATTTTTTAAAATAAT TGCTGTCTTATATAGTGCT TGAA AACACTATATAAAACAGCA TTTTTTATAGAATAA CPE0772 957018 - 955777 - | hypothetical protein TERM 1362 956713 - 956701 - G 79 -7.7 -4.20806 | opp_overlap 956701 956700 CATTGTAAAAGTAAA TGCTC CAA GAGCA ATTGTTCCAGGTATA CPE0773 957314 - 957162 - | hypothetical protein CPE0774 957776 - 958522 + | hypothetical protein TERM 1363 958944 - 958934 - g 70 -4 -4.9792 | opp_overlap 958934 GATTGGAGAGAAAAA TCTT CAG AAGA GTTAATAAGTCATAT CPE0775 958700 - 959398 + | hypothetical protein TERM 1364 959443 - 959468 + F 100 -8.5 -5.8187 | opp_overlap 959443 ATTTTAAGTTTAAAA GAAACATAGAA ACTA TTTTATGTTTC TTTTTTTATTAAATG CPE0776 959551 - 960252 + | transcriptional regulator TERM 1365 960471 - 960509 + T 84 -9.3 -3.70919 | gap 1, overlap 960465 GATATACTGTCTTAG TTTAGGAGTGTATTATAA GGTT TTATA-TACACTTCTAAA TTATTCAACTTTAGA rubR1 960671 - 960510 - | rubredoxin TERM 1366 961173 - 961230 + H 78 -8.3 -3.86944 | gap 1, overlap 961176 961228 TTATAGGTTTAACTG TAAGTAACAATATATGAAGTTTCATTAA GTA TTAATTTAAGT-CATATATTGTTACTTA TTTAATAATTATAAA CPE0778 961274 - 962020 + | flavohemoprotein TERM 1367 962087 - 962122 + F 100 -12.2 -4.8083 | opp_overlap 962092, overlap 962092 GATTTAAAATGTTAT AAAAAGTAGTTAATTC TTAA GAATTAACTACTTTTG TTTTTAATAATATTA TERM 1368 962117 - 962092 - f 100 -12.1 -4.90296 | opp_overlap 962092 962087 AAAATGTTATAAAAA GTAGTTAATTC TTAA GAATTAACTAC TTTTGTTTTTAATAA TERM 1369 962092 - 962117 + F 100 -12.1 -5.3104 | opp_overlap 962092, overlap 962087 AAAATGTTATAAAAA GTAGTTAATTC TTAA GAATTAACTAC TTTTGTTTTTAATAA CPE0779 962239 - 962949 + | transcriptional regulator TERM 1370 962947 - 962998 + T 100 -14.3 -2.86661 | gap 1, opp_overlap 962958, overlap 962958 962994 TTAGATTTAGCAGAG TA-AAGTAAAAAGCCTAATAAATC TATAT GATTTATTAGGCTTTTTACTAATA TAATATTATTCAGTT TERM 1371 962958 - 962986 + T 100 -13.4 -4.79223 | opp_overlap 962958, overlap 962947 AGAGTAAAGTAAAAA GCCTAATAAATC TATAT GATTTATTAGGC TTTTTACTAATATAA TERM 1372 962986 - 962958 - T 100 -13.4 -5.02715 | opp_overlap 962958 962947 AGAGTAAAGTAAAAA GCCTAATAAATC TATAT GATTTATTAGGC TTTTTACTAATATAA rubR2 963165 - 963004 - | rubredoxin CPE0781 964412 - 963192 - | metallo-beta-lactamase family protein CPE0782 964622 - 965191 + | alkyl hydrogen peroxide reductase TERM 1373 965235 - 965198 - f 100 -9.4 -5.11112 | opp_overlap 965197 965202 965207 965230, overlap 965202 965207 AAACTTTAATAAAAA TAAATAAAAGAGTGGC TTAATT ACCACTCTTTTATTAA ATTAATATATAGTTT TERM 1374 965231 - 965202 - f 100 -10.2 -5.05606 | opp_overlap 965197 965202 965207 965230, overlap 965198 965207 TTTAATAAAAATAAA TAAAAGAGTGGC TTAATT ACCACTCTTTTA TTAAATTAATATATA TERM 1375 965202 - 965231 + F 80 -9.5 -3.23235 | opp_overlap 965202 965198 965207, overlap 965197 965207 965230 TTTAATAAAAATAAA TAAAAGAGTGG CTTAATTA CCACTCTTTTA TTAAATTAATATATA TERM 1376 965226 - 965207 - f 81 -5.7 -5.3167 | opp_overlap 965202 965197 965207, overlap 965202 965198 TAAAAATAAATAAAA GAGTGGC TTAATT ACCACTC TTTTATTAAATTAAT CPE0783 965438 - 967108 + | thioredoxin reductase TERM 1377 967167 - 967127 - T 82 -10.1 -2.99458 | opp_overlap 967132, overlap 967132 TATTATAAAACACCA CAAAATAACCTTAACAA TTTAATT TTGTTAAGGTTATTTTT ATAGATTTAAGTTAA TERM 1378 967132 - 967162 + T 100 -10 -4.94992 | opp_overlap 967132 967127 TAAAACACCACAAAA TAACCTTAACAA TTTAATT TTGTTAAGGTTA TTTTTATAGATTTAA TERM 1379 967162 - 967132 - T 100 -10 -4.60713 | opp_overlap 967132, overlap 967127 TAAAACACCACAAAA TAACCTTAACAA TTTAATT TTGTTAAGGTTA TTTTTATAGATTTAA vgaB 968935 - 967229 - | ABC transporter TERM 1380 968008 - 968034 + g 100 -9.6 -4.8066 | opp_overlap 968004, overlap 968004 ATAATGTGAAATCTT TAGCTTCTATAA GAT TTTTAGAAGCTA TTTTTAAATTATCTT TERM 1381 968253 - 968267 + g 91 -5 -5.75822 | opp_overlap 968253 CGCTTATTAAGGATA GCATTT TCA AGATGC TTTTTTTCATTTATA TERM 1382 968913 - 968889 - G 93 -5.7 -5.82281 | opp_overlap 968890, overlap 968890 AAAGACATAAAAAAA TCCCTCCTATA AAT TACAGGAGAGT ATATATAGTCATAAA TERM 1383 968912 - 968890 - G 88 -9.2 -4.05708 | opp_overlap 968890, overlap 968889 AAGACATAAAAAAAT CCCTCCTATA AAT TACAGGAGAG TATATATAGTCATAA TERM 1384 969557 - 969547 - H 70 -4 -5.1471 | ATGACAAAAAATAAA CAAA GAC TTTG AATAATAAATATTTT TERM 1385 970326 - 970340 + G 71 -5.7 -4.41047 | CTGCCATAGGAGTTA CTGCT TGTAC AGCAG TTTTAGTTGCAGGAT pfoS/R 969653 - 970711 + | regulatory protein apbA 970747 - 971673 + | 2-dehydropantoate 2-reductase TERM 1386 971703 - 971731 + F 100 -9.1 -5.32599 | opp_overlap 971703 TATAGTTTTTTTAAA GTTGATTTTTATG TTT TATAGAAATCAAC TTTTTATATTTTATA TERM 1387 972012 - 971996 - g 70 -5.1 -4.59226 | overlap 971997 AGATTAAAAAAAATA GCAGCTA AAA TAGCTGA AGATGAATTAAAACC TERM 1388 972011 - 971997 - g 74 -8.6 -3.33095 | overlap 971996 GATTAAAAAAAATAG CAGCTA AAA TAGCTG AAGATGAATTAAAAC CPE0787 971936 - 972361 + | MarR family transcriptional regulator TERM 1389 972466 - 972413 - f 95 -9.9 -4.19746 | opp_overlap 972414 972417 972420, overlap 972414 972420 CTTATTTGAAAACAA GTAGTAATGCACAACTTCTTACATT TTTA ATTATAAGAAGCTGTGCATTATTAT ATATATAAGTACTTA TERM 1390 972414 - 972465 + F 87 -11.2 -3.01684 | opp_overlap 972413 972414 972420, overlap 972417 972420 TTATTTGAAAACAAG TAGTAATGCACAACTTCTTACATT TTTA ATTATAAGAAGCTGTGCATTATTA TATATATAAGTACTT TERM 1391 972465 - 972414 - f 95 -13.4 -3.11366 | opp_overlap 972414 972417 972420, overlap 972413 972420 TTATTTGAAAACAAG TAGTAATGCACAACTTCTTACATT TTTA ATTATAAGAAGCTGTGCATTATTA TATATATAAGTACTT TERM 1392 972417 - 972462 + F 91 -10.7 -3.64912 | opp_overlap 972414 972413 972420, overlap 972414 972420 TTTGAAAACAAGTAG TAATGCACAACTTCTTACATT TTTA ATTATAAGAAGCTGTGCATTA TTATATATATAAGTA TERM 1393 972420 - 972459 + F 75 -8 -3.95183 | opp_overlap 972414 972413 972420, overlap 972417 972414 GAAAACAAGTAGTAA TGCACAACTTCTTACATT TTTA ATTATAAGAAGCTGTGCA TTATTATATATATAA TERM 1394 972459 - 972420 - f 95 -12.4 -3.36965 | opp_overlap 972420 972417 972414, overlap 972414 972413 GAAAACAAGTAGTAA TGCACAACTTCTTACATT TTTA ATTATAAGAAGCTGTGCA TTATTATATATATAA TERM 1395 972639 - 972627 - g 71 -4.9 -4.82333 | AGAAGAATTTAAAAA TAAGT TTA ACTTA GATAATATAGAAAAT CPE0788 972580 - 973083 + | hypothetical protein TERM 1396 973090 - 973122 + F 100 -10.1 -5.65927 | opp_overlap 973090 GGATTATAAGAGAAA GCTATATCAAATC TTTACTT GGTTTGATATAGC TTTTTTATTTAAATA TERM 1397 973122 - 973090 - f 78 -7.9 -4.29304 | opp_overlap 973090 GGATTATAAGAGAAA GCTATATCAAATC TTTACTT GGTTTGATATAGC TTTTTTATTTAAATA CPE0789 973186 - 973629 + | transcriptional regulator CPE0790 973712 - 974593 + | pirin-like protein CPE0791 974627 - 975223 + | NAD(P)H dehydrogenase TERM 1398 975302 - 975337 + T 100 -16.6 -3.45839 | opp_overlap 975302, overlap 975305 975314 ATATTGAATAAAAAA TAATACTGAAAATGAA AAAT TTCATTTTCAGTATTA TTAATATTTAGGGAT TERM 1399 975337 - 975302 - T 100 -16.6 -5.49234 | opp_overlap 975302 975305 975314 ATATTGAATAAAAAA TAATACTGAAAATGAA AAAT TTCATTTTCAGTATTA TTAATATTTAGGGAT TERM 1400 975305 - 975334 + T 100 -13.9 -3.8613 | opp_overlap 975302, overlap 975302 975314 TTGAATAAAAAATAA TACTGAAAATGAA AAAT TTCATTTTCAGTA TTATTAATATTTAGG CPE0792 976349 - 975399 - | iron(III) dicitrate ABC transporter TERM 1401 976533 - 976489 - g 70 -3.9 -5.13473 | opp_overlap 976502 976524 AGTATATGGAAAAAA TTATAAATAACAATAAGACAA AAT TTTTCTTACTTTTATTTTTAA TAATATTAACAGGAA TERM 1402 976683 - 976657 - g 86 -7.4 -5.02439 | opp_overlap 976657 976656 976665 976682 ACATAATTATAAAAA CATCTAGAGTTC CTA GAACTTTAAATG CTCTTTTAGTTGGAG CPE0793 976479 - 977483 + | iron(III) dicitrate ABC transporter CPE0794 977483 - 978505 + | iron(III) dicitrate ABC transporter TERM 1403 978494 - 978484 - f 72 -4 -5.4505 | TCTTTTAATAAAAAA TAGA AAG TCTA CAAATAGGTGATGAA TERM 1404 978531 - 978521 - g 72 -4 -5.09245 | TGAAAATGATAAAAA CAAA TAA TTTG AAATTGTGTTATGAT CPE0795 978511 - 979281 + | iron(III) dicitrate ABC transporter TERM 1405 979560 - 979588 + F 88 -6.8 -5.59879 | overlap 979563 AATGCAGATGATTAT TAGGGGAGTTTA GGGAA TAAACTCCCTTC TTTTTTGTATTTATG TERM 1406 979563 - 979585 + F 100 -10.7 -4.8277 | overlap 979560 GCAGATGATTATTAG GGGAGTTTA GGGAA TAAACTCCC TTCTTTTTTGTATTT CPE0796 979635 - 980150 + | MutT/nudix family protein TERM 1407 980166 - 980203 + T 90 -7.4 -5.42975 | opp_overlap 980166 TTCTAAATATAAAAA TACTTTATCAAAAA GATATTAAAA TTTTTGATAAAGTA TTTTTCTTTGTATAG TERM 1408 980203 - 980166 - T 87 -7.4 -5.19879 | opp_overlap 980166 TTCTAAATATAAAAA TACTTTATCAAAAA GATATTAAAA TTTTTGATAAAGTA TTTTTCTTTGTATAG CPE0797 980881 - 980300 - | PAP2 family protein TERM 1409 980706 - 980719 + g 83 -2.4 -5.95286 | ACAATGGTGTCTACA GCTA TTCCTC TAGC TTTTTTATTTTTACT CPE0798 981105 - 981845 + | hypothetical protein CPE0799 982027 - 983271 + | hypothetical protein TERM 1410 983296 - 983323 + T 78 -4.2 -5.5074 | TAGATGTAAATTTAA CTTCGTCCTA TGTACATT TAGGATGGAG TTTTTTATTACATTG CPE0800 983933 - 983406 - | hypothetical protein TERM 1411 983467 - 983480 + g 72 -5.3 -4.74012 | TTTAAATTTAAGTAT GTTTC AGTT GAAAC TTTTGATTTTATGGT TERM 1412 983581 - 983600 + g 74 -2.2 -5.65496 | opp_overlap 983581 983596, overlap 983582 983596 TATGAACTATAAGAT GTTTCTAT GAAG ATAGAAAG TTTTTCTTTTTCATC TERM 1413 983596 - 983606 + g 70 -4 -4.87626 | opp_overlap 983581 983596, overlap 983582 983581 GTTTCTATGAAGATA GAAA GTT TTTC TTTTTCATCTTCAGA CPE0801 984452 - 984919 + | hypothetical protein TERM 1414 984925 - 984946 + F 100 -11.7 -5.76237 | opp_overlap 984925 AGAAATATAAAAAAA TGCTTCACA ATTT TGTGAAGCA TTTTTTATTTATATG TERM 1415 984946 - 984925 - f 100 -11.7 -5.90231 | opp_overlap 984925 AGAAATATAAAAAAA TGCTTCACA ATTT TGTGAAGCA TTTTTTATTTATATG TERM 1416 985125 - 985114 - g 78 -3 -5.54338 | TAAGTAAAAGAAAAA CTAT GAGC ATAG AGATTTCCGCTGAGG CPE0802 985047 - 985406 + | hypothetical protein CPE0803 985384 - 985761 + | hypothetical protein CPE0804 985945 - 987819 + | sensory box protein/histidinol phosphate phosphatase family protein TERM 1417 987884 - 987837 - f 73 -7.5 -3.71265 | opp_overlap 987840, overlap 987840 AAGATATGATTTAAA GTA-GTGTTTGGTTTAGATAGTA ATTA TA-TATCTAAACTAAACACTTAC CTAAAACAAAATCTT TERM 1418 987840 - 987880 + F 90 -11.6 -3.05384 | gap 1, opp_overlap 987837 987840 ATATGATTTAAAGTA GTGTTTGGTTTAGATAGTA ATTA TA-TATCTAAACTAAACAC TTACCTAAAACAAAA TERM 1419 987880 - 987840 - f 78 -9.4 -2.95384 | gap 1, opp_overlap 987840, overlap 987837 ATATGATTTAAAGTA GTGTTTGGTTTAGATAGTA ATTA TA-TATCTAAACTAAACAC TTACCTAAAACAAAA TERM 1420 988048 - 988067 + F 77 -8 -4.12857 | TATTTTTTTGATTTG TTTTGGTA CCGT TACCAAAA TTGTTTGTAATAATT CPE0805 988114 - 989946 + | cyclomaltodextrinase TERM 1421 989967 - 990009 + F 100 -8.8 -5.48623 | opp_overlap 989967 989988 AATAAATTAAAAAAA GAGTAAGAATTTTAGAATGT ATT ATATTTTATAATTTTTACTC TTTTTATTTATATTT TERM 1422 990009 - 989967 - f 73 -2.2 -5.77856 | opp_overlap 989967, overlap 989988 AATAAATTAAAAAAA GAGTAAGAATTTTAGAATGT ATT ATATTTTATAATTTTTACTC TTTTTATTTATATTT TERM 1423 991121 - 991094 - g 83 -2 -5.97979 | gap 1, overlap 991099 ATAAGAATAAAAAAA CACAT-GGGAAGA CTT TCTCCTCTATGCG GTGCAGGAATAGCAG CPE0806 990191 - 991474 + | hypothetical protein CPE0807 992256 - 991753 - | hypothetical protein CPE0808 992576 - 993121 + | hypothetical protein TERM 1424 993161 - 993103 - T 100 -11.5 -3.84985 | gap 1, opp_overlap 993110, overlap 993110 993119 993123 TATGAAAATAGAGAA TTTTAAATCAGCCAAATAAATATCAAGA GTAC TCTTGATATTTATTTGGCTGATTTTTT- TAAACAATATCTTTT TERM 1425 993110 - 993155 + T 100 -25.3 -5.41143 | opp_overlap 993103 993110 993119 993123 ATAGAGAATTTTAAA TCAGCCAAATAAATATCAAGA GTAC TCTTGATATTTATTTGGCTGA TTTTTTTAAACAATA TERM 1426 993155 - 993110 - T 100 -25.3 -3.71213 | opp_overlap 993110, overlap 993103 993119 993123 ATAGAGAATTTTAAA TCAGCCAAATAAATATCAAGA GTAC TCTTGATATTTATTTGGCTGA TTTTTTTAAACAATA TERM 1427 993146 - 993119 - T 95 -11.6 -3.74224 | opp_overlap 993110, overlap 993110 993103 993123 TTTAAATCAGCCAAA TAAATATCAAGA GTAC TCTTGATATTTA TTTGGCTGATTTTTT TERM 1428 993142 - 993123 - T 81 -8 -4.47786 | opp_overlap 993110, overlap 993119 993110 993103 AATCAGCCAAATAAA TATCAAGA GTAC TCTTGATA TTTATTTGGCTGATT CPE0809 993781 - 993161 - | hypothetical protein TERM 1429 993266 - 993281 + g 88 -7.6 -4.87626 | AGATATAGGAGTTTT TGAAGG AAGT CCTTCA TTTTTAATATTAAGG TERM 1430 993374 - 993384 + g 82 -4 -5.54894 | TTTATCAGCATGTCT TTCT TCA AGAA TTTTTTTACTGAATT fhuD 994044 - 994988 + | iron(III) dicitrate ABC transporter TERM 1431 994999 - 995039 + F 91 -10.7 -3.76125 | gap 1, opp_overlap 994990 994997 AATAATTAAAATTTT TAGTAGGGGCTGTATC AAAATATAAG GATACAGCCCC-ACTA TTTAAGTTAAAATAG fhuB 995087 - 996100 + | ferrichrome ABC transporter fhuG 996104 - 997117 + | ferrichrome ABC transporter fhuC 997182 - 997964 + | ferrichrome ABC transporter TERM 1432 998016 - 998060 + F 100 -14.1 -4.25615 | opp_overlap 998021, overlap 998021 ATATTATAGTTTAAT AAAAATAAATCTTAGAGAATA TTT TATTTTCTAAGATTTATTTTA TTTATTAAAGTTTTT TERM 1433 998055 - 998021 - f 100 -11.8 -5.09204 | opp_overlap 998021 998016 ATAGTTTAATAAAAA TAAATCTTAGAGAATA TTT TATTTTCTAAGATTTA TTTTATTTATTAAAG TERM 1434 998021 - 998055 + F 100 -14 -5.09762 | opp_overlap 998021, overlap 998016 ATAGTTTAATAAAAA TAAATCTTAGAGAATA TTT TATTTTCTAAGATTTA TTTTATTTATTAAAG CPE0814 998264 - 998752 + | GNAT family acetyltransferase CPE0815 998829 - 999044 + | hypothetical protein CPE0816 999037 - 999354 + | hypothetical protein TERM 1435 999512 - 999553 + T 90 -9.9 -3.78902 | gap 1, opp_overlap 999521 999537, overlap 999521 TGAAATCTAGATGGA TAA-CAAAAATAGTTGCT AAATAAA AGCAACTATTTTTGCTTA TTTAAATATTACTTA TERM 1436 999543 - 999521 - T 83 -6.4 -5.20333 | opp_overlap 999521 999512, overlap 999537 GATGGATAACAAAAA TAGTTGCT AAATAAA AGCAACTA TTTTTGCTTATTTAA TERM 1437 999521 - 999543 + T 80 -6.4 -5.04356 | opp_overlap 999521 999537, overlap 999512 GATGGATAACAAAAA TAGTTGCT AAATAAA AGCAACTA TTTTTGCTTATTTAA CPE0817 999892 - 999566 - | hypothetical protein TERM 1438 1000199 - 1000223 + H 79 -3.8 -5.70829 | opp_overlap 1000189 1000204 ATGAATTTGAAAAAA TAAAATTTTT CTAAA AAAAGTTTTA TTTTTTTGTCATATT TERM 1439 1000216 - 1000204 - H 70 -3.5 -5.42198 | opp_overlap 1000199, overlap 1000189 TTTGAAAAAATAAAA TTTTT CTA AAAAA AGTTTTATTTTTTTG TERM 1440 1002391 - 1002378 - g 74 -5.3 -4.98522 | opp_overlap 1002378 AATTCCAGATAAAAA GGTTT ATGA AAACC TTGCCTTATATAAAT TERM 1441 1003438 - 1003418 - g 71 -4.7 -4.68919 | AAATAGAAATGAAAA TAGAAAGTG AAG CACCTACTA ACTTAAGAACAGTAG CPE0818 1000306 - 1003689 + | endo-beta-N-acetylglucosaminidase TERM 1442 1003714 - 1003757 + F 100 -10.8 -5.4505 | gap 1, opp_overlap 1003714 ATAATTAATTATAAA TGATATTAGATAG-ATTTAAA TAT TTTATATTCTATCTAATATCA TTTTTTATTAGGCCA TERM 1443 1003757 - 1003714 - f 95 -10.8 -4.10934 | gap 1, opp_overlap 1003714 ATAATTAATTATAAA TGATATTAGATAG-ATTTAAA TAT TTTATATTCTATCTAATATCA TTTTTTATTAGGCCA TERM 1444 1003842 - 1003824 - f 70 -7.6 -3.41913 | opp_overlap 1003822, overlap 1003823 TTTATATGCAAAAAT TCTATAAT AAT ATTATAGA GCTAAATTTGGATTT ddl 1003890 - 1004798 + | D-alanine--D-alanine ligase CPE0820 1004945 - 1005772 + | hypothetical protein TERM 1445 1006259 - 1006246 - g 76 -6.7 -4.3623 | opp_overlap 1006246 1006245 AGAGCAAAAATGAAA GAAGC AATC GCTTC CTTTGATAATCAAGA CPE0821 1006099 - 1007079 + | PTS system TERM 1446 1007546 - 1007562 + G 73 -8.1 -3.48696 | opp_overlap 1007545 1007546 TAATATAAGAAAAGT TGAAATG TGG CATTTCA TTGCTATTCTTATGC CPE0822 1007130 - 1007933 + | PTS system, mannose/fructose/sorbose family, IIC component CPE0823 1007953 - 1008444 + | PTS system CPE0824 1008407 - 1008865 + | PTS system TERM 1447 1008878 - 1008912 + F 79 -7.3 -4.64676 | gap 1 TAATATTTTTATTTA GCCTAGGTTA-GTATA ATAT TTTACTTAGCCTAGGC TTTTCTTAAAAATAA TERM 1448 1009075 - 1009085 + G 70 -5.4 -4.66953 | overlap 1009072 1009078 GTGGATTTAGTAGTT GATG CAA CATC TTTTTCAGGTCTTGC TERM 1449 1009240 - 1009230 - g 72 -6.8 -4.06502 | overlap 1009225 TATGTTCAAAGGAAA GTGG ATT CCAC GATATGCAATTAAAA CPE0825 1009036 - 1009410 + | hypothetical protein CPE0826 1009782 - 1010033 + | hypothetical protein TERM 1450 1010126 - 1010155 + F 90 -6.6 -5.74086 | GCATGGGCAACCGTC TAAAAAGCTGCT TAAATT AGTGGCTTTTTA TTTTTTATTTAATTT CPE0827 1010354 - 1011271 + | polysaccharide deacetylase family protein TERM 1451 1011327 - 1011317 - f 70 -4 -5.11063 | ATTATTTAATAAAAA TTCT AAA AGAA GTATTAAATAAATAT TERM 1452 1011474 - 1011429 - f 93 -8 -5.19251 | gap 1, opp_overlap 1011429 TAATAGGAATAAAAA GCTACTAATTTTATGCACATA TGATT TAAGTA-ATAAAATTAGTAGC TTTAATTTTTTATAA CPE0828 1011728 - 1012510 + | hypothetical protein TERM 1453 1013315 - 1013299 - g 70 -5.9 -4.21974 | TGATTAGTGAAGAAA CCTTAAA ATC CTTAAGG AGTGCTAAGAATTGG CPE0829 1012767 - 1013708 + | hypothetical protein TERM 1454 1013721 - 1013771 + T 100 -16.6 -4.18693 | opp_overlap 1013729, overlap 1013722 1013729 TAATTATTATAGATA TTTTAAAAGAGATATTTGTGTGGC TTA GTCACATAAGTATCTCTTTTAAGG TTTAATTTATAATTT TERM 1455 1013722 - 1013770 + T 100 -17.9 -3.09589 | opp_overlap 1013729, overlap 1013721 1013729 AATTATTATAGATAT TTTAAAAGAGATATTTGTGTGGC TTA GTCACATAAGTATCTCTTTTAAG GTTTAATTTATAATT TERM 1456 1013729 - 1013763 + T 100 -13.8 -4.25676 | opp_overlap 1013729, overlap 1013722 1013721 ATAGATATTTTAAAA GAGATATTTGTGTGGC TTA GTCACATAAGTATCTC TTTTAAGGTTTAATT TERM 1457 1013763 - 1013729 - T 73 -7.2 -4.18802 | opp_overlap 1013729 1013722 1013721 ATAGATATTTTAAAA GAGATATTTGTGTGGC TTA GTCACATAAGTATCTC TTTTAAGGTTTAATT CPE0830 1015128 - 1013773 - | hypothetical protein bgaL 1015357 - 1017771 + | beta-galactosidase CPE0832 1018565 - 1019518 + | hypothetical protein TERM 1458 1020175 - 1020188 + G 71 -2.3 -5.40474 | overlap 1020176 TTTGGCATCTATTGC ACCCT TTAT AGGGA TTTTTTTACCAAAAT TERM 1459 1020565 - 1020585 + G 71 -7.1 -3.73756 | opp_overlap 1020582 TTTAAGTCCATGGAT TTTATTATT CTT AATAATAAA TGTTTTAATAAGCTA TERM 1460 1021362 - 1021382 + G 72 -6.9 -4.03978 | ATATTAAAACCTTTG CATTTACTG TGG CAGAAAATG TTTCTCTAGAGGATT CPE0833 1020041 - 1021861 + | ABC transporter CPE0834 1021861 - 1023651 + | ABC transporter CPE0835 1023868 - 1024365 + | hypothetical protein CPE0836 1024374 - 1026002 + | hypothetical protein TERM 1461 1026204 - 1026175 - f 83 -5.9 -5.4182 | gap 1, opp_overlap 1026175 AAGGAGAAATAAAAA GGTTGTATAAGTTA ATT TAACTT-TGCAACC TTTTTTAGTTGTTTT TERM 1462 1026175 - 1026204 + F 100 -8.1 -5.43514 | gap 1, opp_overlap 1026175 AAGGAGAAATAAAAA GGTTGTATAAGTTA ATT TAACTT-TGCAACC TTTTTTAGTTGTTTT CPE0837 1026369 - 1026653 + | transcriptional regulator CPE0838 1026771 - 1027169 + | arsenate reductase ArsC CPE0839 1027186 - 1028502 + | hypothetical protein TERM 1463 1028525 - 1028564 + F 91 -5.2 -6.0427 | TATTTTTCATTATGA CTGTATTAGGGAACTT AAATTAAA AAGTGCTTTAATACAG TTTTTTTTATATAAT CPE0840 1028688 - 1029356 + | two-component response regulator TERM 1464 1029606 - 1029586 - g 76 -9.1 -3.09517 | overlap 1029584 ATTAGACAGAAAGTA CCTATTACC TGA GGTAATAGA AGAGCCAAATTTCTA TERM 1465 1029920 - 1029905 - g 72 -6.2 -4.20817 | TATATTGTAAAAGAA TTTTCC TTAG GGAAAA GTGTAAGAAATGTAA CPE0841 1029353 - 1030363 + | two-component sensor histidine kinase TERM 1466 1030375 - 1030431 + F 91 -10.8 -3.62535 | opp_overlap 1030369 1030374 1030375 1030387, overlap 1030387 TTAATGAAATAAATT TGAATTTAAAAATACAATTAGTTT AAATAATGA AAACTAATTGTATTTTTAGATTAA TTATATGATATTTAG TERM 1467 1030419 - 1030387 - f 78 -6.6 -4.74504 | opp_overlap 1030375 1030387, overlap 1030374 1030375 ATTTGAATTTAAAAA TACAATTAGTTT AAATAATGA AAACTAATTGTA TTTTTAGATTAATTA TERM 1468 1030387 - 1030419 + F 78 -6.6 -4.77896 | opp_overlap 1030387 1030374 1030375, overlap 1030375 ATTTGAATTTAAAAA TACAATTAGTTT AAATAATGA AAACTAATTGTA TTTTTAGATTAATTA CPE0842 1030647 - 1030814 + | hypothetical protein CPE0843 1030943 - 1031356 + | hypothetical protein CPE0844 1031773 - 1031615 - | hypothetical protein CPE0845 1032390 - 1031779 - | hypothetical protein CPE0846 1032778 - 1034352 + | alpha-clostripain TERM 1469 1034393 - 1034431 + F 100 -10.6 -5.07941 | opp_overlap 1034397, overlap 1034397 AAGAAATTAAGTTAA GAAATAACTCTACTTATA AGG TTTAAGTAGAGTTATTTA TTTTTGTGTAATTTT TERM 1470 1034427 - 1034397 - f 100 -11.4 -4.26953 | opp_overlap 1034393 1034397 AATTAAGTTAAGAAA TAACTCTACTTATA AGG TTTAAGTAGAGTTA TTTATTTTTGTGTAA TERM 1471 1034397 - 1034427 + F 100 -11.4 -5.01422 | opp_overlap 1034397, overlap 1034393 AATTAAGTTAAGAAA TAACTCTACTTATA AGG TTTAAGTAGAGTTA TTTATTTTTGTGTAA TERM 1472 1034901 - 1034879 - f 95 -8.5 -5.09521 | opp_overlap 1034879 1034881, overlap 1034898 GTAATAAATCAAAAA GAGAGTTGC TTTTT ACAACTCTC TATCTTAAAGATGAT TERM 1473 1035492 - 1035472 - g 95 -7.7 -5.42605 | opp_overlap 1035472 TTAAGAAAAATAAAA TTGCTATAA TAT CTATAGCAA TAATTATAATTTTTG CPE0847 1035447 - 1036241 + | hypothetical protein TERM 1474 1036527 - 1036541 + F 70 -7.2 -3.68222 | AGTTGGTTAAGAGGG CAGATT GCT AATCTG TTATTAGGCTTAAAG TERM 1475 1036861 - 1036875 + G 74 -7.2 -4.0044 | opp_overlap 1036870 1036871 1036873, overlap 1036873 TAGCAGTAGTTGCTA TAGTAC AAA GTACTA TTTATAATAGTAGTT CPE0848 1036701 - 1037438 + | hypothetical protein TERM 1476 1037427 - 1037446 + F 100 -10.8 -5.54338 | opp_overlap 1037422 1037427 1037430 AAGATGAAAATTGAA GAACTCTC TTAA GAGAGTTC TTTTTATTTTACTTA TERM 1477 1037446 - 1037427 - f 90 -10.8 -3.41195 | opp_overlap 1037427, overlap 1037422 1037430 AAGATGAAAATTGAA GAACTCTC TTAA GAGAGTTC TTTTTATTTTACTTA CPE0849 1037849 - 1038499 + | hypothetical protein TERM 1478 1039159 - 1039116 - f 95 -12 -3.60939 | opp_overlap 1039123 1039128, overlap 1039123 1039127 AACAAACATAATTAA GAGAAAATAAAGGACTAGGA ATTC TCCTAGTCTTTTATTTCGTC AAAAAACGTCAAAAA TERM 1479 1039123 - 1039152 + F 100 -13.1 -3.72576 | opp_overlap 1039116 1039123 1039127, overlap 1039128 ATAATTAAGAGAAAA TAAAGGACTAGGA ATTC TCCTAGTCTTTTA TTTCGTCAAAAAACG TERM 1480 1039152 - 1039123 - f 100 -10.9 -4.74767 | opp_overlap 1039123 1039128, overlap 1039116 1039127 ATAATTAAGAGAAAA TAAAGGACTAGGA ATTC TCCTAGTCTTTTA TTTCGTCAAAAAACG TERM 1481 1039148 - 1039127 - f 81 -7.3 -4.88163 | opp_overlap 1039123 1039128, overlap 1039123 1039116 TTAAGAGAAAATAAA GGACTAGGA ATTC TCCTAGTCT TTTATTTCGTCAAAA TERM 1482 1039128 - 1039147 + F 100 -10.8 -4.93877 | opp_overlap 1039127 1039123 1039116, overlap 1039123 TAAGAGAAAATAAAG GACTAGGA ATTC TCCTAGTC TTTTATTTCGTCAAA TERM 1483 1039290 - 1039273 - f 75 -7.1 -4.21142 | opp_overlap 1039273 ATTCTAATATAGAAA TCTTACA ACAT TGTAAGA TTTATGAAAGATAAA TERM 1484 1039273 - 1039290 + F 71 -7.1 -3.86897 | opp_overlap 1039273 ATTCTAATATAGAAA TCTTACA ACAT TGTAAGA TTTATGAAAGATAAA CPE0850 1039372 - 1040139 + | ABC transporter TERM 1485 1040615 - 1040630 + G 75 -4.8 -5.1485 | overlap 1040604 ATTTTAAAAACTGTT TTATAC TTTG GTATAA TTTTTATCTTAGTTA CPE0851 1040120 - 1042174 + | ABC transporter TERM 1486 1042167 - 1042156 - f 76 -4.4 -5.28683 | ATCAACAGTAAAAAA TGCT TTAA AGCA AAAATAATATAATAA TERM 1487 1042223 - 1042186 - f 100 -8.6 -5.31072 | opp_overlap 1042188 1042189 1042218, overlap 1042188 1042189 1042222 ATAATATAATAAAAA TAGTTAAGGAGCTTGA ATTTAA TCAAGCTCCTTAAATT ATATTCTATTTAAAA TERM 1488 1042188 - 1042221 + F 100 -11.2 -3.87201 | opp_overlap 1042186 1042188 1042189, overlap 1042189 1042218 AATATAATAAAAATA GTTAAGGAGCTTGA ATTTAA TCAAGCTCCTTAAA TTATATTCTATTTAA TERM 1489 1042221 - 1042188 - f 100 -11.2 -4.26142 | opp_overlap 1042188 1042189 1042218, overlap 1042186 1042189 AATATAATAAAAATA GTTAAGGAGCTTGA ATTTAA TCAAGCTCCTTAAA TTATATTCTATTTAA TERM 1490 1042220 - 1042189 - f 100 -14.7 -3.13245 | opp_overlap 1042188 1042189 1042218, overlap 1042188 1042186 ATATAATAAAAATAG TTAAGGAGCTTGA ATTTAA TCAAGCTCCTTAA ATTATATTCTATTTA TERM 1491 1042189 - 1042220 + F 100 -14.7 -2.91236 | opp_overlap 1042189 1042188 1042186, overlap 1042188 1042218 ATATAATAAAAATAG TTAAGGAGCTTGA ATTTAA TCAAGCTCCTTAA ATTATATTCTATTTA CPE0852 1042539 - 1043960 + | hypothetical protein CPE0853 1044513 - 1044211 - | hypothetical protein TERM 1492 1045431 - 1045441 + G 76 -5.4 -5.09204 | opp_overlap 1045431 1045429 GAAAATAGAGAAACA CCTA TTA TAGG TTTTTATTGCAATCT aspC 1044777 - 1045919 + | aminotransferase, class V rubY 1046108 - 1046647 + | rubrerythrin TERM 1493 1047688 - 1047674 - g 71 -7.2 -3.81414 | opp_overlap 1047674 ACTTGTAATGAAGAA GTAAAG GCT CTTTAC TATGATGTAGAGGTT CPE0856 1047164 - 1050232 + | alpha-mannosidase TERM 1494 1050395 - 1050377 - T 83 -7.4 -4.9138 | ATTACTTAAAGAAAA TGGTAAGC ATA GCTTGCCA AGGGGGAAATTAGGT TERM 1495 1050421 - 1050444 + T 87 -6 -5.72053 | opp_overlap 1050423 TAGGTATAAGGAAAA GGCAACCTTT GAGG GAGGGTTGTC TTTTTTGTTTGATTA CPE0857 1051046 - 1050489 - | hypothetical protein TERM 1496 1051513 - 1051495 - g 70 -8.2 -3.09635 | opp_overlap 1051495 ACTTGGAGGAGTTAA GCCTAATC CTA GATTAAGC TTAGTTAAAAAGGGA bdhA 1051286 - 1052458 + | NADH-dependent butanol dehydrogenase CPE0859 1052896 - 1053834 + | putative carbohydrate diacid regulator TERM 1497 1053871 - 1053840 - f 100 -13.2 -6.11229 | opp_overlap 1053840 ATTAAAATAAAAAAA GGTTTTCTTTGTGC GTTT GCATAAAGAAAACC TTTTTATTTTAGTGA TERM 1498 1053840 - 1053871 + F 100 -15.4 -5.50723 | opp_overlap 1053840 ATTAAAATAAAAAAA GGTTTTCTTTGTGC GTTT GCATAAAGAAAACC TTTTTATTTTAGTGA TERM 1499 1054513 - 1054533 + G 73 -8.3 -3.4268 | opp_overlap 1054515, overlap 1054511 TAACTAATGTTATGA TAGCAGGTA TAG TACCAGCTA TATTTGGAGTTATAA TERM 1500 1054792 - 1054775 - g 71 -7.1 -3.81926 | overlap 1054788 TATGGGAAAAATTAA GCATATT AACA AATATGC AACATATGGACTAGC CPE0860 1053981 - 1055240 + | gluconate permease CPE0861 1055464 - 1056585 + | hypothetical protein TERM 1501 1056620 - 1056658 + F 100 -12 -5.55769 | opp_overlap 1056631 GATAGATAGTTTAAG GTGAACATAAGCAATAAA AAA TATATTGTTTGTGTTCAC TTTTTTATTATAAAG TERM 1502 1056659 - 1056694 + F 73 -7.2 -4.18401 | opp_overlap 1056681, overlap 1056661 ATTGTTTGTGTTCAC TTTTTTATTATAAAGA AAAA TCTTTATAATAAGATA TTTTAAAATATATAA TERM 1503 1056661 - 1056692 + F 90 -9.8 -3.6878 | opp_overlap 1056681, overlap 1056659 TGTTTGTGTTCACTT TTTTATTATAAAGA AAAA TCTTTATAATAAGA TATTTTAAAATATAT deaD 1056913 - 1058349 + | ATP-dependent RNA helicase DeaD TERM 1504 1058463 - 1058438 - f 78 -7.8 -4.19735 | opp_overlap 1058438 1058460 TGTGGTAAAATTAAA GTAAGATATA GTAAAA TATATCTTAC TTTTTTTAAAAGGAA TERM 1505 1058438 - 1058463 + F 100 -7.8 -5.40072 | opp_overlap 1058438, overlap 1058460 TGTGGTAAAATTAAA GTAAGATATA GTAAAA TATATCTTAC TTTTTTTAAAAGGAA CPE0863 1058504 - 1058962 + | hypothetical protein TERM 1506 1058993 - 1058971 - f 83 -9.2 -3.63805 | opp_overlap 1058971 AGTTTAGATTTTAAA GCTCTAAGTT TAA AACTTAGGGC TTTTTTTAATTAAGA TERM 1507 1058971 - 1058993 + F 100 -11.4 -5.63103 | opp_overlap 1058971 AGTTTAGATTTTAAA GCTCTAAGTT TAA AACTTAGGGC TTTTTTTAATTAAGA CPE0864 1059103 - 1060527 + | MATE efflux family protein CPE0865 1060634 - 1060807 + | hypothetical protein TERM 1508 1060841 - 1060891 + F 100 -14.5 -4.90136 | opp_overlap 1060840 1060841 TTTTAATTTAAATAG TTAGGGCTTGTAGCTAATTTTAA TAAGT TTAAAGTTAGCTATAAGCTTTAA TTTTTGCTATTACTT TERM 1509 1061979 - 1061951 - g 75 -4.7 -5.1101 | CTATTATTTAAAAAA TTATTGTAATGTA AGT TACAATCCAATAA TGGGATCTAATTTAA TERM 1510 1064404 - 1064394 - g 74 -6.8 -4.25104 | GTTGCTTTAGGAAAA CCAG TTA CTGG AGCAGAGGCTGAAAA CPE0866 1061148 - 1067462 + | alpha-N-acetylglucosaminidase family protein CPE0867 1067722 - 1067901 + | hypothetical protein TERM 1511 1067972 - 1068007 + T 100 -16.6 -5.12068 | opp_overlap 1067972, overlap 1068005 TAATGACTAAATAAA TAGGATTGTATTAAAA TAAC TTTTAATACAATCCTA TTTTTATTAAATATA TERM 1512 1068007 - 1067972 - T 100 -16.6 -4.53349 | opp_overlap 1067972 1068005 TAATGACTAAATAAA TAGGATTGTATTAAAA TAAC TTTTAATACAATCCTA TTTTTATTAAATATA alr 1069174 - 1068014 - | alanine racemase CPE0869 1069713 - 1070282 + | GNAT family acetyltransferase TERM 1513 1070299 - 1070333 + T 100 -11.7 -4.49377 | opp_overlap 1070304 1070308, overlap 1070304 TATAAAATAAAGTTT AAAAAGAAACAGAGT ATAGA ACTCTGTTTCTTTTC TTATTTTATTGTAGG TERM 1514 1070304 - 1070328 + T 100 -11.6 -5.14949 | opp_overlap 1070304 1070308, overlap 1070299 AATAAAGTTTAAAAA GAAACAGAGT ATAGA ACTCTGTTTC TTTTCTTATTTTATT TERM 1515 1070328 - 1070304 - T 100 -11.6 -4.7339 | opp_overlap 1070304 1070299, overlap 1070308 AATAAAGTTTAAAAA GAAACAGAGT ATAGA ACTCTGTTTC TTTTCTTATTTTATT TERM 1516 1070324 - 1070308 - T 78 -6.6 -4.88293 | opp_overlap 1070304 1070299, overlap 1070304 AAGTTTAAAAAGAAA CAGAGT ATAGA ACTCTG TTTCTTTTCTTATTT CPE0870 1071452 - 1070334 - | two-component sensor histidine kinase CPE0871 1072286 - 1071723 - | hypothetical protein TERM 1517 1071993 - 1071965 - G 76 -7 -4.45261 | gap 1, opp_overlap 1071972 1071983 1071985 TAAACAAATTTAAAA TAACAATGCTAAA TAGA TTTAGC-TTGTTA AAAGTAACAAGCATG TERM 1518 1072479 - 1072499 + H 75 -8.5 -3.56593 | opp_overlap 1072479 1072496, overlap 1072466 1072462 AATTTTTTAAGAGAA CTTATTAAT AAC ATTAATAAG TTATACTTATAAAGT TERM 1519 1072499 - 1072479 - H 76 -8.5 -3.66556 | opp_overlap 1072479 1072466 1072462, overlap 1072496 AATTTTTTAAGAGAA CTTATTAAT AAC ATTAATAAG TTATACTTATAAAGT CPE0872 1072648 - 1074423 + | metallopeptidase, M24 family CPE0873 1074643 - 1075044 + | hypothetical protein CPE0874 1075169 - 1075387 + | hypothetical protein CPE0875 1075490 - 1076617 + | metalloprotease family protein TERM 1520 1076645 - 1076682 + F 100 -13.8 -3.55783 | opp_overlap 1076645 1076650, overlap 1076650 ATTATAGAATAATAA TTAAATTAGGGGATGA AGAGAC TCATCTCCTAATTTAA TTCTAGTTGAATTTT TERM 1521 1076682 - 1076645 - f 100 -12.3 -4.07466 | opp_overlap 1076645 1076650, overlap 1076650 ATTATAGAATAATAA TTAAATTAGGGGATGAA GAGA CTCATCTCCTAATTTAA TTCTAGTTGAATTTT TERM 1522 1076677 - 1076650 - f 77 -7.8 -4.15849 | opp_overlap 1076645 1076650, overlap 1076645 AGAATAATAATTAAA TTAGGGGATGAA GAGA CTCATCTCCTAA TTTAATTCTAGTTGA TERM 1523 1076650 - 1076677 + F 86 -9.3 -4.04295 | opp_overlap 1076650 1076645, overlap 1076645 AGAATAATAATTAAA TTAGGGGATGA AGAGAC TCATCTCCTAA TTTAATTCTAGTTGA CPE0876 1076721 - 1077164 + | GNAT family acetyltransferase TERM 1524 1077319 - 1077274 - T 85 -10.1 -3.27503 | gap 1, opp_overlap 1077279, overlap 1077279 TTAATATAGAAGATA TAAAAGAGCATGTAATAA-GTT TAA AACATTAATACATGCTCTTTTT ACTATTTAATTTAAA TERM 1525 1077279 - 1077314 + T 100 -10 -4.946 | gap 1, opp_overlap 1077274 1077279 ATAGAAGATATAAAA GAGCATGTAATAA-GTT TAA AACATTAATACATGCTC TTTTTACTATTTAAT TERM 1526 1077314 - 1077279 - T 100 -10 -4.72127 | gap 1, opp_overlap 1077279, overlap 1077274 ATAGAAGATATAAAA GAGCATGTAATAA-GTT TAA AACATTAATACATGCTC TTTTTACTATTTAAT CPE0877 1078012 - 1077347 - | hypothetical protein CPE0878 1079346 - 1078174 - | transposase TERM 1527 1079803 - 1079781 - H 75 -5.6 -5.0065 | overlap 1079768 TAGCTATAAAGAAAA TAGCAGACCT CAT ATGTCTACTA TATAGAAATAAAAAA CPE0879 1080208 - 1080750 + | GNAT family acetyltransferase TERM 1528 1080877 - 1080823 - T 70 -6.3 -4.25859 | gap 2, opp_overlap 1080823 1080844, overlap 1080826 1080844 TTTAAGGTAAAATAA TAAGGTGGTTGTATAAAAAAATTATAA GTC TTATAATTT-TTTAT-CAATCACCTTG TTATTTTTTATATTA TERM 1529 1080823 - 1080877 + T 100 -10.7 -4.80737 | gap 2, opp_overlap 1080823 1080826 1080844, overlap 1080844 TTTAAGGTAAAATAA TAAGGTGGTTGTATAAAAAAATTATAA GTC TTATAATTT-TTTAT-CAATCACCTTG TTATTTTTTATATTA TERM 1530 1080874 - 1080826 - T 78 -8 -4.23379 | gap 2, opp_overlap 1080823 1080844, overlap 1080823 1080844 AAGGTAAAATAATAA GGTGGTTGTATAAAAAAATTATAA GTC TTATAATTT-TTTAT-CAATCACC TTGTTATTTTTTATA TERM 1531 1080844 - 1080858 + T 76 -4.4 -5.28176 | opp_overlap 1080844 1080826 1080823, overlap 1080823 GGTTGTATAAAAAAA TTATAA GTC TTATAA TTTTTTATCAATCAC TERM 1532 1080858 - 1080844 - T 78 -4.4 -5.60993 | opp_overlap 1080823 1080844, overlap 1080826 1080823 GGTTGTATAAAAAAA TTATAA GTC TTATAA TTTTTTATCAATCAC CPE0880 1081761 - 1081006 - | hypothetical protein nagI 1081969 - 1085862 + | hyaluronidase TERM 1533 1085936 - 1085890 - T 70 -7.7 -3.36131 | gap 1, opp_overlap 1085895, overlap 1085892 1085894 1085895 1085897 AAAATTAGTTTATAA TATAGTAGCTGTATCAAAATAA GTTT TAATTTTGATACAGCTATT-TA TTAATAGAAATTTTT TERM 1534 1085935 - 1085892 - T 72 -8.4 -3.24137 | opp_overlap 1085895, overlap 1085890 1085894 1085895 1085897 AATTAGTTTATAATA TAGTAGCTGTATCAAAATAA GTTT TAATTTTGATACAGCTATTT ATTAATAGAAATTTT TERM 1535 1085933 - 1085894 - T 90 -11 -3.18118 | opp_overlap 1085895, overlap 1085892 1085890 1085895 1085897 TTAGTTTATAATATA GTAGCTGTATCAAAATAA GTTT TAATTTTGATACAGCTAT TTATTAATAGAAATT TERM 1536 1085895 - 1085932 + T 100 -14.5 -4.2461 | opp_overlap 1085895 1085894 1085892 1085890 1085897 TAGTTTATAATATAG TAGCTGTATCAAAATAA GTTT TAATTTTGATACAGCTA TTTATTAATAGAAAT TERM 1537 1085932 - 1085895 - T 100 -14.5 -2.5055 | opp_overlap 1085895, overlap 1085894 1085892 1085890 1085897 TAGTTTATAATATAG TAGCTGTATCAAAATAA GTTT TAATTTTGATACAGCTA TTTATTAATAGAAAT TERM 1538 1085930 - 1085897 - T 91 -12.7 -2.78526 | opp_overlap 1085895, overlap 1085895 1085894 1085892 1085890 GTTTATAATATAGTA GCTGTATCAAAATAA GTTT TAATTTTGATACAGC TATTTATTAATAGAA CPE0882 1086503 - 1086183 - | hypothetical protein TERM 1539 1086993 - 1086979 - g 75 -7.2 -4.08279 | opp_overlap 1086979, overlap 1086992 AGAGGCTAGAAATAA GATTCT TAA AGAATC TTCTGAAATTGTTGC CPE0883 1086932 - 1087120 + | hypothetical protein CPE0884 1087176 - 1087991 + | ABC transporter CPE0885 1087988 - 1089637 + | hypothetical protein TERM 1540 1089721 - 1089690 - T 76 -8.4 -3.80569 | opp_overlap 1089675 1089694 1089695, overlap 1089671 1089694 TAAAATAGAGTTAAA TAAACTTAATTTTA TATA TAAAATTAAATTTA AAAATCTTAACCTTA TERM 1541 1089726 - 1089754 + T 100 -10.5 -5.4433 | opp_overlap 1089726 AATTAAATTTAAAAA TCTTAACCTTATT TTA AAGAAGGTTAAGA TTTTTATTTATATAT TERM 1542 1089754 - 1089726 - T 100 -10.5 -4.83759 | opp_overlap 1089726 AATTAAATTTAAAAA TCTTAACCTTATT TTA AAGAAGGTTAAGA TTTTTATTTATATAT CPE0886 1090571 - 1089786 - | LysM domain protein TERM 1543 1090677 - 1090641 - R 78 -4.2 -5.46276 | gap 2, opp_overlap 1090641 AATATACATAAAAAA GAATCTTA-AAA-AATAT TAA ATATTATTTCTAAGATTC TTTATAATCAATAAA CPE0887 1091445 - 1090894 - | hypothetical protein TERM 1544 1091977 - 1091967 - g 71 -6.8 -3.88232 | overlap 1091974 GGTGCCATAGAAGAA GGAG AGA CTCC TAAAGAAGCTGCCTT CPE0888 1091766 - 1092416 + | pyrophosphatase, MutT/nudix family CPE0889 1092507 - 1092926 + | hypothetical protein TERM 1545 1092940 - 1092962 + F 100 -12.2 -5.16237 | opp_overlap 1092940 AATTAAAATAAAAAA GACAAATACT TTT AGTATTTGTC TTTTTTAATCACATT TERM 1546 1092962 - 1092940 - f 100 -12.2 -5.85244 | opp_overlap 1092940 AATTAAAATAAAAAA GACAAATACT TTT AGTATTTGTC TTTTTTAATCACATT CPE0890 1093292 - 1093546 + | hypothetical protein CPE0891 1093462 - 1093917 + | hypothetical protein TERM 1547 1093983 - 1094019 + F 100 -16.8 -5.65177 | opp_overlap 1093986 1093989, overlap 1093986 TGGTGTTTAGAGAGC AAAGAAGCTCCATAGG AAATC CCTATGGAGCTTCTTA TTTTTTTATAAGTAT TERM 1548 1094016 - 1093986 - f 100 -19.2 -3.88498 | opp_overlap 1093983 1093986, overlap 1093989 TGTTTAGAGAGCAAA GAAGCTCCATAGGA AAT CCCTATGGAGCTTC TTATTTTTTTATAAG TERM 1549 1093986 - 1094016 + F 100 -18.5 -4.89054 | opp_overlap 1093986 1093989, overlap 1093983 TGTTTAGAGAGCAAA GAAGCTCCATAGG AAATC CCTATGGAGCTTC TTATTTTTTTATAAG TERM 1550 1094013 - 1093989 - f 100 -15.1 -4.06993 | opp_overlap 1093986 1093983, overlap 1093986 TTAGAGAGCAAAGAA GCTCCATAGGA AAT CCCTATGGAGC TTCTTATTTTTTTAT TERM 1551 1094962 - 1094944 - g 77 -7.5 -4.30576 | GTTTTAGGAGGAAAA TTCCATG TTCCT CATGGAA GAACTAACTCAATAT CPE0892 1094185 - 1095315 + | NADPH-dependent butanol dehydrogenase pduU 1095669 - 1096019 + | propanediol utilization protein pduV 1096023 - 1096457 + | propanediol utilization protein CPE0895 1096475 - 1097050 + | two-component response regulator CPE0896 1097054 - 1098481 + | two-component sensor histidine kinase TERM 1552 1099154 - 1099171 + G 78 -4.1 -5.41143 | TGGACATTGGAGGAG GTACAAG TAAC CTTGCAC TTTTTTTAAGAGGTG TERM 1553 1099688 - 1099667 - g 70 -5.9 -4.25957 | ATACAACAGAAATAA GTGGAAGTA CAAT TACTTACAC AAAGGATAGTTTCCC eutA 1098691 - 1100124 + | reactivating factor for ethanolamine ammonia lyase eutB 1100143 - 1101510 + | ethanolamine ammonia lyase heavy chain TERM 1554 1101707 - 1101695 - g 76 -6.3 -4.66625 | ATAGATATAAAGAAA CAACT TTT AGTTG ATAATCCAGCTGATA eutC 1101527 - 1102414 + | ethanolamine ammonia-lyase small subunit eutL 1102436 - 1103089 + | ethanolamine utilization protein pduJ 1103102 - 1103887 + | propanediol utilization protein TERM 1555 1104126 - 1104108 - g 77 -4.6 -5.243 | opp_overlap 1104107 1104108, overlap 1104125 TAAAGTATTAAAAAA TGTTTTTG CTG CAAGAACA GTTTATGAATCAATA adhE 1103887 - 1105365 + | alcohol dehydrogenase pduJ 1105721 - 1106011 + | propanediol utilization protein TERM 1556 1106029 - 1106058 + F 75 -6.5 -4.45485 | opp_overlap 1106028, overlap 1106033 AAAAGTTGTAATTAG GGGTTGCATAAAG AGTC TTTTATGCACTCC TTTTATACATCTAAT TERM 1557 1106566 - 1106576 + G 76 -5.4 -5.0916 | GAGGTTTTAAGTGAG CCTT TAG AAGG TTTTTCTCTTCAAGG eutT 1106050 - 1106865 + | ethanolamine utilization cobalamin adenosyltransferase pduL 1106875 - 1107510 + | propanediol utilization protein CPE0906 1107716 - 1108474 + | hypothetical protein TERM 1558 1108571 - 1108559 - f 72 -6.3 -4.44301 | opp_overlap 1108559 1108560, overlap 1108556 ATTTAAAATAAACAA CCTTT AAA AAAGG TTTGAAGTATTTAGG eutN 1108622 - 1108894 + | ethanolamine utilization protein pduT 1108896 - 1109450 + | propanediol utilization protein eutH 1109501 - 1110598 + | ethanolamine utilization protein TERM 1559 1110950 - 1110976 + G 74 -6.6 -4.2828 | opp_overlap 1110951, overlap 1110951 TAATAGATGGAAGAA AGATTTCAGCAG ATG CTGGTGAAATCA TTTTAATACCTAAAG TERM 1560 1110951 - 1110975 + G 78 -10.1 -3.16647 | opp_overlap 1110951, overlap 1110950 AATAGATGGAAGAAA GATTTCAGCAG ATG CTGGTGAAATC ATTTTAATACCTAAA TERM 1561 1110975 - 1110951 - g 91 -10.1 -4.24887 | opp_overlap 1110951 1110950 AATAGATGGAAGAAA GATTTCAGCAG ATG CTGGTGAAATC ATTTTAATACCTAAA eutQ 1110601 - 1111074 + | ethanolamine utilization protein TERM 1562 1111142 - 1111107 - f 100 -13.6 -4.55491 | opp_overlap 1111109, overlap 1111109 GATTGAAGTATAAAA CATAGAGCTTACTTTT TAAT AAAAGTAAGCTCTATT TTGGTATTAGGTTAG TERM 1563 1111109 - 1111140 + F 100 -16.2 -4.44284 | opp_overlap 1111107 1111109 TTGAAGTATAAAACA TAGAGCTTACTTTT TAAT AAAAGTAAGCTCTA TTTTGGTATTAGGTT TERM 1564 1111140 - 1111109 - f 100 -16.2 -3.8823 | opp_overlap 1111109, overlap 1111107 TTGAAGTATAAAACA TAGAGCTTACTTTT TAAT AAAAGTAAGCTCTA TTTTGGTATTAGGTT bsaA 1111442 - 1111918 + | glutathione peroxidase CPE0912 1112351 - 1112896 + | hypothetical protein TERM 1565 1112943 - 1112981 + F 78 -6.3 -5.0133 | gap 1, opp_overlap 1112943 1112948, overlap 1112948 AAATTGATTTAAGTA GAAAATACAATGGTACTA AATT TAG-GCCATTGTATTTTG TTTTTTAGAGCAATA TERM 1566 1112948 - 1112976 + F 83 -6.2 -5.42198 | gap 1, opp_overlap 1112943 1112948, overlap 1112943 GATTTAAGTAGAAAA TACAATGGTACTA AATT TAG-GCCATTGTA TTTTGTTTTTTAGAG CPE0913 1113188 - 1113499 + | hypothetical protein TERM 1567 1113591 - 1113563 - f 100 -10.5 -5.18726 | opp_overlap 1113563 GTTTTATAAGAAAAA GCACTAAATTTAT TTA ATAGATTTAGTGC TTTTTTATAAATATT TERM 1568 1113563 - 1113591 + F 100 -12.7 -5.30686 | opp_overlap 1113563 GTTTTATAAGAAAAA GCACTAAATTTAT TTA ATAGATTTAGTGC TTTTTTATAAATATT TERM 1569 1114978 - 1114956 - g 72 -8.6 -2.8937 | overlap 1114944 1114942 AGAGATTTTTATATA TCCTTAAATG TTT CATTTAAAGA AATAGAAAATCCTAA CPE0914 1113813 - 1115453 + | hypothetical protein CPE0915 1115535 - 1116155 + | NADPH-dependent FMN reductase TERM 1570 1116259 - 1116211 - f 100 -13 -4.68545 | gap 1, opp_overlap 1116214, overlap 1116214 AGTTAATAGAGAAAA TAAGTGAAATATATCAAAG-TTA ATTT TAATCTTTGATATATTTCACTTT TATTTAGTTATATTC TERM 1571 1116214 - 1116256 + F 100 -14.7 -5.02357 | gap 1, opp_overlap 1116211 1116214 TAATAGAGAAAATAA GTGAAATATATCAAAG-TTA ATTT TAATCTTTGATATATTTCAC TTTTATTTAGTTATA TERM 1572 1116256 - 1116214 - f 100 -14.7 -4.43832 | gap 1, opp_overlap 1116214, overlap 1116211 TAATAGAGAAAATAA GTGAAATATATCAAAG-TTA ATTT TAATCTTTGATATATTTCAC TTTTATTTAGTTATA CPE0916 1116597 - 1117022 + | hypothetical protein TERM 1573 1117040 - 1117075 + F 100 -8.7 -5.0065 | gap 1, opp_overlap 1117044 1117068 TTTAGTTTTTATTTG TAAAGTAAGGTTATAT ATTAA ATA-AACCTTACTTTA TTTTATTTATAAATA TERM 1574 1117125 - 1117102 - f 70 -7 -3.73299 | overlap 1117100 AATAAAATAACAATA TTAATTAAAT ACAT ATTTAATTAA AAAAGAAATTATTAA nrdD 1117404 - 1119164 + | anaerobic ribonucleoside triphosphate reductase CPE0918 1119215 - 1119619 + | hypothetical protein TERM 1575 1119627 - 1119672 + F 74 -5 -5.18371 | gap 1, opp_overlap 1119627 AGAAATAAAGGTAAA GAACTGTACCA-AGTATTATA TAGGT TTTTATACTTTGGTATAGTTC TTTTATTTTGTAAAA CPE0919 1119814 - 1120536 + | hypothetical protein TERM 1576 1120660 - 1120675 + T 100 -7.6 -5.9362 | opp_overlap 1120660 AATATTTAGAAGAAA CTCAGT TATT ACTGAG TTTTTTTGTATTTTA TERM 1577 1120675 - 1120660 - T 78 -7.6 -4.35091 | opp_overlap 1120660 AATATTTAGAAGAAA CTCAGT TATT ACTGAG TTTTTTTGTATTTTA CPE0920 1120959 - 1120741 - | hypothetical protein CPE0921 1121179 - 1121721 + | nitroreductase family protein TERM 1578 1121759 - 1121727 - f 71 -6.4 -4.18948 | opp_overlap 1121729, overlap 1121722 1121729 ATATAAATAAGTAAA GAGCAAACTAGC AAATAAGAA GCTAGTTTGCTT TTTTAAAAAGATAAT TERM 1579 1121757 - 1121729 - f 79 -9 -3.67141 | opp_overlap 1121729, overlap 1121727 1121722 ATAAATAAGTAAAGA GCAAACTAGC AAATAAGAA GCTAGTTTGC TTTTTTAAAAAGATA TERM 1580 1121729 - 1121757 + F 100 -9 -5.0133 | opp_overlap 1121729 1121727 1121722 ATAAATAAGTAAAGA GCAAACTAGC AAATAAGAA GCTAGTTTGC TTTTTTAAAAAGATA CPE0922 1122001 - 1122627 + | hypothetical protein CPE0923 1122654 - 1123067 + | hypothetical protein TERM 1581 1123210 - 1123198 - g 74 -6.3 -4.45399 | opp_overlap 1123198 AGATGAATATGAAAA TAAGC ATG GCTTA TCATTTCATATAGAA CPE0924 1123136 - 1123966 + | metallo-beta-lactamase family protein CPE0925 1124142 - 1124318 + | hypothetical protein glpF 1124547 - 1125251 + | glycerol uptake facilitator protein TERM 1582 1125306 - 1125277 - f 80 -8.2 -4.2573 | opp_overlap 1125277 TAAATAAGTTTAAAA TTATTATCTATA GATCAA TATAGATAATAA TTTTTTTTAATTATA TERM 1583 1125277 - 1125306 + F 100 -8.2 -5.98781 | opp_overlap 1125277 TAAATAAGTTTAAAA TTATTATCTATA GATCAA TATAGATAATAA TTTTTTTTAATTATA CPE0927 1125438 - 1126670 + | sensor histidine kinase TERM 1584 1126919 - 1126908 - g 70 -4.4 -4.90477 | TATAAAAAATGAAAA TCCT AATA AGGA AATAATAATGCTTAC CPE0928 1126690 - 1127442 + | two-component response regulator TERM 1585 1127594 - 1127638 + F 100 -9.8 -5.95539 | gap 1, opp_overlap 1127594, overlap 1127626 AAAATGACATAAGAA TAGGATTATTTTAATTTTTAC GCAA GTAGAG-TTAAAATAATCCTA TTTTTTTATTTAAAA TERM 1586 1128255 - 1128242 - g 73 -8.1 -3.3879 | opp_overlap 1128254, overlap 1128240 AACCCAGTTCAAATA GCAGC AGAT GCTGC AGAGGCTGCTTTAAG CPE0929 1127780 - 1129444 + | coenzyme B12-dependent glycerol dehydrogenase large subunit CPE0930 1129452 - 1130024 + | coenzyme B12-dependent glycerol dehydrogenase medium subunit CPE0931 1130044 - 1130469 + | coenzyme B12-dependent glycerol dehydrogenase small subunit TERM 1587 1131287 - 1131276 - g 75 -4.4 -5.18643 | TTAAGGAAAAGAAAA TACC AGCT GGTA AGATTAATATAACAG TERM 1588 1131358 - 1131368 + G 74 -6.8 -4.32177 | opp_overlap 1131358 AGATAAAATAATGGA GGCT GTT AGCC TTTGTTCTCCAATAG CPE0932 1130486 - 1132336 + | glycerol dehydratase reactivation factor, large subunit CPE0933 1132329 - 1132679 + | glycerol dehydratase reactivation factor, small subunit CPE0934 1132698 - 1133210 + | hypothetical protein CPE0935 1133234 - 1133662 + | hypothetical protein TERM 1589 1133703 - 1133677 - f 81 -9 -3.86063 | opp_overlap 1133677 1133702, overlap 1133702 ATAAAAAGCTAATAA TATTTAACCTAT ATA ATAGATTAAATA TTTAAAATATATTTT CPE0936 1133756 - 1134913 + | 1,3-propanediol dehydrogenase TERM 1590 1134995 - 1134951 - f 87 -7.3 -5.10004 | overlap 1134959 1134960 AAAAATAATTAAAAA TATAATAAGTGCTAGCTCTAA TAA TTAGAGCTAGCAAATAATAAA AGGCATAAATACAAT TERM 1591 1134987 - 1134959 - f 100 -13.3 -4.14576 | overlap 1134951 1134960 TTAAAAATATAATAA GTGCTAGCTCTAA TAA TTAGAGCTAGCAA ATAATAAAAGGCATA TERM 1592 1134986 - 1134960 - f 100 -16.8 -3.07119 | overlap 1134959 1134951 TAAAAATATAATAAG TGCTAGCTCTAA TAA TTAGAGCTAGCA AATAATAAAAGGCAT TERM 1593 1135225 - 1135180 - f 100 -22.5 -3.31501 | opp_overlap 1135180, overlap 1135191 AGGAATTTTTCATAA TATATTTAAAAGACTCTTTCA ATAT TGAAAGAGTCTTTTAAATATA TTTATTATTATTTTC TERM 1594 1135180 - 1135225 + F 100 -22.5 -4.66418 | opp_overlap 1135180 1135191 AGGAATTTTTCATAA TATATTTAAAAGACTCTTTCA ATAT TGAAAGAGTCTTTTAAATATA TTTATTATTATTTTC TERM 1595 1135214 - 1135191 - f 100 -12.6 -4.28977 | opp_overlap 1135180, overlap 1135180 ATAATATATTTAAAA GACTCTTTCA ATAT TGAAAGAGTC TTTTAAATATATTTA TERM 1596 1135378 - 1135352 - f 78 -8.2 -3.91032 | opp_overlap 1135343 1135358, overlap 1135356 TAACGATTTCATAAA TAAATATGCATA GTT TATGCATTTTTA TTCAAAAAATATATT TERM 1597 1135358 - 1135372 + F 83 -7.2 -5.06414 | opp_overlap 1135356 1135352, overlap 1135343 TTTCATAAATAAATA TGCATA GTT TATGCA TTTTTATTCAAAAAA TERM 1598 1135525 - 1135543 + G 71 -4.6 -4.83169 | overlap 1135528 AAAAAAATAAAGTTA TGGGCATT GGT AATGCTTA TTTTTGTACCAACAT TERM 1599 1135528 - 1135540 + G 76 -6.3 -4.52873 | overlap 1135525 AAAATAAAGTTATGG GCATT GGT AATGC TTATTTTTGTACCAA TERM 1600 1136440 - 1136471 + G 84 -8.8 -4.20516 | opp_overlap 1136449 1136458 1136465, overlap 1136441 CCAATAAGAGCCATG TTTGGAGAAGTTCC AAAG GGAACATTTCCAAG TTTCTTAACTAAGAA TERM 1601 1136441 - 1136470 + G 78 -10.1 -3.11988 | opp_overlap 1136449 1136458 1136465, overlap 1136440 CAATAAGAGCCATGT TTGGAGAAGTTCC AAAG GGAACATTTCCAA GTTTCTTAACTAAGA CPE0937 1135498 - 1136967 + | amino acid permease family protein TERM 1602 1137022 - 1137044 + F 78 -4.2 -5.47399 | overlap 1137023 TATTTTCATATAACT TTATAGCTTA GAT TAAGCAATAG TTTTTTTAAAATTAA CPE0938 1137256 - 1137930 + | hypothetical protein TERM 1603 1137953 - 1137997 + F 100 -13.9 -4.86822 | opp_overlap 1137938 1137955, overlap 1137938 1137955 GTTAGTATTCTTACA AACTCCCTTTGTAGTAATAAT TAA ATTTTTACTATAAAGGGAGTA TTTTATTATATAGTT TERM 1604 1137995 - 1137955 - f 100 -14.3 -3.88291 | opp_overlap 1137953 1137955 TAGTATTCTTACAAA CTCCCTTTGTAGTAATAAT TAA ATTTTTACTATAAAGGGAG TATTTTATTATATAG TERM 1605 1137955 - 1137995 + F 100 -16.5 -4.03793 | opp_overlap 1137955, overlap 1137953 TAGTATTCTTACAAA CTCCCTTTGTAGTAATAAT TAA ATTTTTACTATAAAGGGAG TATTTTATTATATAG CPE0939 1138271 - 1138783 + | GNAT family acetyltransferase TERM 1606 1138785 - 1138828 + T 81 -10.6 -2.60988 | opp_overlap 1138790 1138795, overlap 1138790 1138795 TGAAGTCTTTTTAGA CAAAATAAAAGTACTGGAAT TTTT ATGCCAGTACTTTTGTTTTA TAAATTAATTAAATT TERM 1607 1138823 - 1138790 - T 82 -8.3 -4.52589 | opp_overlap 1138790 1138785 1138795, overlap 1138795 TCTTTTTAGACAAAA TAAAAGTACTGGAAT TTTT ATGCCAGTACTTTTG TTTTATAAATTAATT TERM 1608 1138790 - 1138823 + T 100 -10.5 -4.48823 | opp_overlap 1138790 1138795, overlap 1138785 1138795 TCTTTTTAGACAAAA TAAAAGTACTGGAAT TTTT ATGCCAGTACTTTTG TTTTATAAATTAATT TERM 1609 1138795 - 1138818 + T 95 -8.2 -5.19275 | opp_overlap 1138790 1138795, overlap 1138790 1138785 TTAGACAAAATAAAA GTACTGGAAT TTTT ATGCCAGTAC TTTTGTTTTATAAAT TERM 1610 1138818 - 1138795 - T 95 -8.2 -5.23292 | opp_overlap 1138795 1138790 1138785, overlap 1138790 TTAGACAAAATAAAA GTACTGGAAT TTTT ATGCCAGTAC TTTTGTTTTATAAAT CPE0940 1139621 - 1138851 - | hypothetical protein CPE0941 1140545 - 1139727 - | hypothetical protein TERM 1611 1140675 - 1140640 - R 84 -9.4 -3.83169 | gap 1, opp_overlap 1140644 1140647, overlap 1140647 TATAAACCTATTAAA TAAAA-AAGAAAACTCC TTA AGAGTTTTCTTCTTTTA AATTAGAATTTGCAT TERM 1612 1140644 - 1140670 + r 73 -6.7 -4.28432 | opp_overlap 1140640 1140647, overlap 1140647 AACCTATTAAATAAA AAAGAAAACTC CTTAA GAGTTTTCTTC TTTTAAATTAGAATT TERM 1613 1140667 - 1140647 - R 100 -9.1 -5.68438 | opp_overlap 1140644 1140647, overlap 1140640 CTATTAAATAAAAAA GAAAACTCC TTA AGAGTTTTC TTCTTTTAAATTAGA TERM 1614 1140647 - 1140667 + r 80 -8.4 -4.25859 | opp_overlap 1140647 1140640, overlap 1140644 CTATTAAATAAAAAA GAAAACTC CTTAA GAGTTTTC TTCTTTTAAATTAGA CPE0942 1141015 - 1140656 - | hypothetical protein CPE0943 1141391 - 1141047 - | hypothetical protein pldB 1141575 - 1142564 + | lysophospholipase TERM 1615 1142605 - 1142558 - T 100 -12.5 -4.3467 | gap 1, opp_overlap 1142564, overlap 1142562 1142564 ATTTTTAGAGGAAAA TAATTAGATATTATAAGAGAGG TTGTG CCTCTCTTATAATATCTT-TTA TATTGATAATCTTTC TERM 1616 1142602 - 1142562 - T 100 -15.8 -3.16858 | opp_overlap 1142564, overlap 1142558 1142564 TTAGAGGAAAATAAT TAGATATTATAAGAGAGG TTGTG CCTCTCTTATAATATCTT TTATATTGATAATCT TERM 1617 1142600 - 1142564 - T 100 -18.4 -3.13368 | opp_overlap 1142564, overlap 1142562 1142558 AGAGGAAAATAATTA GATATTATAAGAGAGG TTGTG CCTCTCTTATAATATC TTTTATATTGATAAT TERM 1618 1142564 - 1142600 + T 100 -19.1 -4.71186 | opp_overlap 1142564 1142562 1142558 AGAGGAAAATAATTA GATATTATAAGAGAGGT TGT GCCTCTCTTATAATATC TTTTATATTGATAAT CPE0945 1143277 - 1142621 - | hypothetical protein TERM 1619 1143499 - 1143525 + r 100 -11 -4.87893 | opp_overlap 1143499 ATATTCTTATAAAAA GGCAACTTAAAT AAA ATTTTAGTTGCC TTTTTACTTAAAGTT TERM 1620 1143525 - 1143499 - R 100 -11 -4.84761 | opp_overlap 1143499 ATATTCTTATAAAAA GGCAACTTAAAT AAA ATTTTAGTTGCC TTTTTACTTAAAGTT CPE0946 1144414 - 1143533 - | hypothetical protein TERM 1621 1144652 - 1144612 - H 80 -6.2 -5.24531 | gap 1 ATTTTGGATAAAAAA GTAGAGCTTGGCATCCGGC GAAG GACTAA-ACCAAGCTCTAC AAAAGAATTAGCACT TERM 1622 1144776 - 1144759 - H 70 -4.3 -5.0538 | GTTGACTTTAAAAAA TAAATAA TATA TTATTTA AAACAAGAAAAATAT TERM 1623 1145013 - 1145047 + H 100 -16.6 -5.94214 | opp_overlap 1145013 AACCGTGGAAGTATA GTCTTCTGCCTCTGTA ATT TACAGAGGTAGAGGGC TTTTTTTATTATATT TERM 1624 1145047 - 1145013 - H 80 -10 -2.90571 | opp_overlap 1145013 AACCGTGGAAGTATA GTCTTCTGCCTCTGTA ATT TACAGAGGTAGAGGGC TTTTTTTATTATATT TERM 1625 1145810 - 1145791 - g 83 -8 -4.61824 | TAAGAATAACTAAAA TGGTATTA AGAA TAATACCA TATGGAGTATTTGCC CPE0947 1145169 - 1146476 + | transmembrane symporter TERM 1626 1147240 - 1147226 - g 77 -5.8 -4.87592 | opp_overlap 1147228 GTAGAGACAATAAAA TATAAG AAC CTTATA TTAGAACCTAGAAGT CPE0948 1146821 - 1147510 + | DNA-binding response regulator TERM 1627 1147632 - 1147618 - f 75 -5.8 -5.0916 | opp_overlap 1147617 1147612 1147618 1147627 1147628 GGTTTAATAGAAAAA TTAAGA CTT TCTTAA GGTTTTCTTTAAGGT CPE0949 1147720 - 1148640 + | ABC transporter CPE0950 1148633 - 1149385 + | hypothetical protein TERM 1628 1149437 - 1149415 - g 79 -9.2 -3.39595 | opp_overlap 1149409 1149417, overlap 1149417 TGGAAGGATTTATAA TAGGATTGTC TTT GACAATCCTT ATTGTGCTTTTAATA TERM 1629 1149435 - 1149417 - g 95 -11.8 -3.2661 | opp_overlap 1149409 1149417, overlap 1149415 GAAGGATTTATAATA GGATTGTC TTT GACAATCC TTATTGTGCTTTTAA TERM 1630 1149417 - 1149435 + G 100 -11.8 -3.96497 | opp_overlap 1149417 1149415, overlap 1149409 GAAGGATTTATAATA GGATTGTC TTT GACAATCC TTATTGTGCTTTTAA TERM 1631 1149786 - 1149811 + G 70 -4.3 -4.8667 | gap 1 ATAGAAAAAAGATCT TTAGTT-TTAAA TGA TTTAATAACTAA TTTTTATGGACTGTC CPE0951 1149399 - 1150304 + | sensor histidine kinase TERM 1632 1150382 - 1150357 - T 83 -7.8 -4.67635 | opp_overlap 1150357, overlap 1150352 TTTAAAAGTATAAAA TAAGCAATTT GAAATT AAATTGCTTA TTTTTTTTAATAAAT TERM 1633 1150357 - 1150382 + T 100 -8.5 -5.86965 | opp_overlap 1150357 1150352 TTTAAAAGTATAAAA TAAGCAATTTG AAAT TAAATTGCTTA TTTTTTTTAATAAAT CPE0952 1150631 - 1150404 - | hypothetical protein TERM 1634 1150766 - 1150798 + H 87 -7.1 -5.24989 | opp_overlap 1150766 AAGTAAAAATATTAA GGTGAGTTAAATTAT TAT GTAGTTTTGCTCACC TTTTTTAGTGTATAA CPE0953 1150930 - 1152141 + | pyridine nucleotide-disulphide oxidoreductase family protein gpo 1152358 - 1152894 + | glutathione peroxidase TERM 1635 1152908 - 1152953 + T 100 -14.5 -2.86202 | gap 1, opp_overlap 1152913, overlap 1152913 AATACAGTTTTTAAG GAAAAGACCTATGATTAG-ATT TTT AATACTAATCATAGGTCTTTTA ATGTTTTAATGTGAA TERM 1636 1152948 - 1152913 - T 100 -14.4 -4.41047 | gap 1, opp_overlap 1152913 1152908 AGTTTTTAAGGAAAA GACCTATGATTAG-ATT TTT AATACTAATCATAGGTC TTTTAATGTTTTAAT TERM 1637 1152913 - 1152948 + T 100 -14.4 -4.56729 | gap 1, opp_overlap 1152913, overlap 1152908 AGTTTTTAAGGAAAA GACCTATGATTAG-ATT TTT AATACTAATCATAGGTC TTTTAATGTTTTAAT clg 1154204 - 1153011 - | collagen triple helix repeat protein TERM 1638 1153272 - 1153293 + g 70 -5.9 -4.25957 | overlap 1153269 ATTTCTAAATAAAGA TACTATAGC GCTA GCTGTGGTA TTATTTGTGTTATCT TERM 1639 1153915 - 1153946 + g 100 -14.4 -3.01924 | opp_overlap 1153924 CCTTGTGGACCTTTA GGTCCAATAGGCCC CATA GGGCCCATAGGACC TATTGGACCACGCTC TERM 1640 1153955 - 1153924 - G 83 -10.8 -3.04144 | opp_overlap 1153915 CCTTTAGGTCCAATA GGCCCCATAGGGCC CATA GGACCTATTGGACC ACGCTCACCTTGACA TERM 1641 1153978 - 1154018 + g 100 -13.9 -3.03159 | opp_overlap 1153981, overlap 1153985 1153986 CCTTGACATCCCATA GGACCTCTTGGTCCTTGAG GAC CCCTAGGACCTTGAGGTCC TCTTGGACCCCTTGG TERM 1642 1154015 - 1153981 - G 78 -10.6 -2.64243 | opp_overlap 1153978 1153985 1153986 TGACATCCCATAGGA CCTCTTGGTCCTTGAG GAC CCCTAGGACCTTGAGG TCCTCTTGGACCCCT TERM 1643 1153986 - 1154028 + g 78 -10.4 -2.50307 | opp_overlap 1153981, overlap 1153978 1153985 1154020 TCCCATAGGACCTCT TGGTCCTTGAGGACCCCTAG GAC CTTGAGGTCCTCTTGGACCC CTTGGTCCAGGTTTA TERM 1644 1154020 - 1154039 + g 83 -10 -3.54424 | overlap 1153986 1153985 GGACCTTGAGGTCCT CTTGGACC CCTT GGTCCAGG TTTACAACAATCGCA TERM 1645 1154325 - 1154296 - R 100 -13.8 -4.9792 | opp_overlap 1154296 1154302 TATTTTATATAAAAA GTAAAAGCACTC AAAATA GAGTGCTTTTAC TTATAAAACTTAATA TERM 1646 1154296 - 1154325 + r 100 -13.8 -3.33737 | opp_overlap 1154296, overlap 1154302 TATTTTATATAAAAA GTAAAAGCACTC AAAATA GAGTGCTTTTAC TTATAAAACTTAATA TERM 1647 1154302 - 1154319 + r 77 -7 -4.48987 | opp_overlap 1154296, overlap 1154296 ATATAAAAAGTAAAA GCACTC AAAATA GAGTGC TTTTACTTATAAAAC CPE0956 1154896 - 1154306 - | putative metal-dependent hydrolase, membrane-bound TERM 1648 1154787 - 1154777 - G 76 -2.6 -5.56112 | AGAAAAATGAAAAAA TAAT GCT ATTA ATAAAATTTTATAAG TERM 1649 1155019 - 1154985 - R 93 -6.7 -5.89659 | AGAAAAAAATAAAAA TCCTAAAAATAGA GTGGACAGT TCTATTTCTAGGA TCAATAGTTATGGTG CPE0957 1155306 - 1155088 - | hypothetical protein TERM 1650 1155767 - 1155754 - g 72 -2.5 -5.40279 | TAAAAGAAAATAAAA TTTTA TTGG TAAAA GAAAAATTAGATGGC mutT 1155516 - 1156130 + | mutator MutT protein TERM 1651 1156142 - 1156197 + T 75 -8.8 -3.25604 | opp_overlap 1156142 1156148, overlap 1156143 1156148 TTAGTTTTTATTATA TTAAAAGCCATAATATTTGAATTT TTATTTTT GAACTTAAATATTATGGCTTTTAG ATTTTAGTTAAATAA TERM 1652 1156143 - 1156196 + T 78 -10.1 -2.54881 | opp_overlap 1156142 1156148, overlap 1156142 1156148 TAGTTTTTATTATAT TAAAAGCCATAATATTTGAATTT TTATTTTT GAACTTAAATATTATGGCTTTTA GATTTTAGTTAAATA CPE0959 1156380 - 1156225 - | hypothetical protein CPE0960 1156509 - 1157150 + | hypothetical protein CPE0961 1157357 - 1157788 + | MarR family transcriptional regulator TERM 1653 1157792 - 1157817 + F 100 -12.1 -5.80817 | opp_overlap 1157792 ATATTAAAGTAAAAA GCATGTATATA AGCA TATATACATGC TTTTTTTATATTAAA TERM 1654 1157817 - 1157792 - f 100 -12.1 -5.02715 | opp_overlap 1157792 ATATTAAAGTAAAAA GCATGTATATA AGCA TATATACATGC TTTTTTTATATTAAA TERM 1655 1158138 - 1158126 - g 71 -4.9 -4.83032 | opp_overlap 1158119 1158109, overlap 1158119 ATATGAAATATAAAA GATAT TTT ATATC ACTTGTACTTATTTT CPE0962 1158113 - 1159072 + | hypothetical protein TERM 1656 1159121 - 1159092 - T 100 -8.8 -5.10497 | opp_overlap 1159092 AATTTATTGAAAAAA TAATTGGCCATA GAAATT TATGACCAATTA TTTTTTTAGGAATTT TERM 1657 1159092 - 1159121 + T 90 -7.3 -5.4477 | opp_overlap 1159092 AATTTATTGAAAAAA TAATTGGCCATAG AAAT TTATGACCAATTA TTTTTTTAGGAATTT CPE0963 1160798 - 1159176 - | transporter TERM 1658 1161255 - 1161269 + G 73 -3.6 -5.18726 | overlap 1161256 GAGTAGTATATTTTT TTATAG TAA CTATAG TTTTTCTTATAGAAG CPE0964 1161203 - 1161373 + | hypothetical protein TERM 1659 1161690 - 1161650 - T 100 -13.7 -2.73721 | opp_overlap 1161652 1161660, overlap 1161652 1161660 AGTAATCCTTAATCA TATAAGAAAAGGTAACTTA TAG TAAGTTACCTTTCTTTATA TTAAAGTTAATTAGA TERM 1660 1161652 - 1161688 + T 90 -11.9 -3.11178 | opp_overlap 1161652 1161650 1161660, overlap 1161660 TAATCCTTAATCATA TAAGAAAAGGTAACTTA TAG TAAGTTACCTTTCTTTA TATTAAAGTTAATTA TERM 1661 1161688 - 1161652 - T 88 -11.9 -2.91199 | opp_overlap 1161652 1161660, overlap 1161650 1161660 TAATCCTTAATCATA TAAGAAAAGGTAACTTA TAG TAAGTTACCTTTCTTTA TATTAAAGTTAATTA TERM 1662 1161680 - 1161660 - T 100 -11.3 -4.86822 | opp_overlap 1161652 1161660, overlap 1161652 1161650 AATCATATAAGAAAA GGTAACTTA TAG TAAGTTACC TTTCTTTATATTAAA TERM 1663 1161660 - 1161680 + T 100 -11.3 -4.68511 | opp_overlap 1161660 1161652 1161650, overlap 1161652 AATCATATAAGAAAA GGTAACTTA TAG TAAGTTACC TTTCTTTATATTAAA CPE0965 1163334 - 1161697 - | GGDEF domain protein TERM 1664 1163307 - 1163295 - G 81 -3.5 -5.58074 | overlap 1163284 TAACTATTAAAAAAA TTAAT AAA ATTAA AAAATATTTCTTTTT CPE0966 1163773 - 1164252 + | hypothetical protein TERM 1665 1164331 - 1164354 + F 81 -5.4 -5.34381 | opp_overlap 1164331 TTTAGCATTTAAAAA GGTAATATTT ATTA ATATATTACC TTTTTATTTACATTT TERM 1666 1164354 - 1164331 - f 71 -5.4 -4.68593 | opp_overlap 1164331 TTTAGCATTTAAAAA GGTAATATTT ATTA ATATATTACC TTTTTATTTACATTT TERM 1667 1164702 - 1164728 + F 100 -7.3 -6.02919 | AACCGTGGAATTTTA CTTCTGCCTCT GTATA GGGGGTAGAAG TTTTTTTATTTATAA CPE0967 1164789 - 1165952 + | glutamate/ aspartate transporter TERM 1668 1165981 - 1165961 - f 78 -5.4 -5.1523 | opp_overlap 1165961, overlap 1165953 TTTATAAGACAAAAA GGTGTACT TTTAT AGTACGCC TTTTTATTTTTAATT TERM 1669 1165961 - 1165981 + F 100 -7.6 -5.67529 | opp_overlap 1165961 1165953 TTTATAAGACAAAAA GGTGTACT TTTAT AGTACGCC TTTTTATTTTTAATT CPE0968 1166285 - 1167280 + | hypothetical protein TERM 1670 1167430 - 1167460 + F 100 -10.1 -5.65177 | opp_overlap 1167418 1167434 1167440 AAGTGTTTACTCTAA TAAACAATAATAA TAAAT TTATTATTGTTTA TTTTTTTATAGGTAT TERM 1671 1167456 - 1167434 - f 71 -6.5 -4.1822 | opp_overlap 1167430, overlap 1167418 1167440 GTTTACTCTAATAAA CAATAATAA TAAAT TTATTATTG TTTATTTTTTTATAG CPE0969 1167573 - 1169483 + | hypothetical protein TERM 1672 1169518 - 1169478 - T 100 -13.8 -3.77087 | gap 1, opp_overlap 1169478 1169489, overlap 1169489 GATTTAATATGTAAA GAATAAAAAAAGAGAGTTT ATTT AAACTCTC-TTTTTTATTC TTCTGGCAAAGTTAA TERM 1673 1169478 - 1169518 + T 100 -13.8 -3.30159 | gap 1, opp_overlap 1169478 1169489, overlap 1169489 GATTTAATATGTAAA GAATAAAAAAAGAGAGTTT ATTT AAACTCTC-TTTTTTATTC TTCTGGCAAAGTTAA TERM 1674 1169508 - 1169489 - T 100 -9.4 -6.01369 | opp_overlap 1169478 1169489, overlap 1169478 TAAAGAATAAAAAAA GAGAGTTT ATTT AAACTCTC TTTTTTATTCTTCTG TERM 1675 1169489 - 1169508 + T 100 -9.4 -5.68489 | opp_overlap 1169489 1169478, overlap 1169478 TAAAGAATAAAAAAA GAGAGTTT ATTT AAACTCTC TTTTTTATTCTTCTG CPE0970 1170967 - 1169513 - | Na+/H+ antiporter TERM 1676 1169683 - 1169669 - G 74 -8.6 -3.25824 | opp_overlap 1169669, overlap 1169668 TACCATTGAGAAAAT CCTACA GCC TGTAGG TAACTTACAATCCTT TERM 1677 1169669 - 1169683 + g 70 -8.6 -2.54371 | opp_overlap 1169669 1169668 TACCATTGAGAAAAT CCTACA GCC TGTAGG TAACTTACAATCCTT CPE0971 1171616 - 1170996 - | hypothetical protein hisB 1171854 - 1172639 + | histidinol phosphatase TERM 1678 1172630 - 1172680 + T 100 -16.1 -4.34008 | gap 1, opp_overlap 1172633 1172644, overlap 1172631 1172633 1172644 AGATAGATTAGAAGT TA-ATAAATAAAAAATAGGAGCTT AGTT AAGCTCCTATTTTTTATTTATATG TTGTTTTACTTGATG TERM 1679 1172631 - 1172678 + T 100 -19 -3.75762 | opp_overlap 1172633 1172644, overlap 1172630 1172633 1172644 GATAGATTAGAAGTT AATAAATAAAAAATAGGAGCTT AGTT AAGCTCCTATTTTTTATTTATA TGTTGTTTTACTTGA TERM 1680 1172633 - 1172676 + T 100 -21.6 -3.44308 | opp_overlap 1172633 1172644, overlap 1172631 1172630 1172644 TAGATTAGAAGTTAA TAAATAAAAAATAGGAGCTT AGTT AAGCTCCTATTTTTTATTTA TATGTTGTTTTACTT TERM 1681 1172676 - 1172633 - T 100 -21.6 -3.25786 | opp_overlap 1172633 1172631 1172630 1172644, overlap 1172644 TAGATTAGAAGTTAA TAAATAAAAAATAGGAGCTT AGTT AAGCTCCTATTTTTTATTTA TATGTTGTTTTACTT TERM 1682 1172644 - 1172665 + T 100 -11.7 -5.76237 | opp_overlap 1172633 1172644, overlap 1172633 1172631 1172630 TTAATAAATAAAAAA TAGGAGCTT AGTT AAGCTCCTA TTTTTTATTTATATG TERM 1683 1172665 - 1172644 - T 100 -11.7 -5.80003 | opp_overlap 1172644 1172633 1172631 1172630, overlap 1172633 TTAATAAATAAAAAA TAGGAGCTT AGTT AAGCTCCTA TTTTTTATTTATATG CPE0973 1172992 - 1172822 - | hypothetical protein CPE0974 1174328 - 1173309 - | hypothetical protein TERM 1684 1173900 - 1173910 + g 72 -5.4 -4.70266 | ATCTGGAGTTATTGA TGCA AAA TGCA TTTTTGAGTCATCTT TERM 1685 1174163 - 1174151 - G 81 -9.1 -3.6682 | opp_overlap 1174151 1174149 1174147 GTGTATCTAGTGAAA GTGGG TTC CCCAC TGTATATAGTTTATT TERM 1686 1174151 - 1174163 + g 76 -9.1 -3.10018 | opp_overlap 1174151, overlap 1174149 1174147 GTGTATCTAGTGAAA GTGGG TTC CCCAC TGTATATAGTTTATT CPE0975 1174529 - 1176469 + | tetracycline resistant protein CPE0976 1176634 - 1176987 + | hypothetical protein TERM 1687 1177069 - 1177021 - T 100 -12.3 -4.24413 | gap 1, opp_overlap 1177029 1177063, overlap 1177024 1177029 TTTATCAAGAAATAA CAATAAAACTTACAAACAATAT GAAAAA ATACTGTTTGTAAGTTTTAT-G AAAAGTTATTTTGAT TERM 1688 1177067 - 1177024 - T 100 -15.1 -4.22676 | opp_overlap 1177029 1177063, overlap 1177021 1177029 ATCAAGAAATAACAA TAAAACTTACAAACAATAT GAAAAA ATACTGTTTGTAAGTTTTA TGAAAAGTTATTTTG TERM 1689 1177062 - 1177029 - T 100 -10.6 -5.04082 | opp_overlap 1177029, overlap 1177024 1177021 GAAATAACAATAAAA CTTACAAACAATAT GAAAAA ATACTGTTTGTAAG TTTTATGAAAAGTTA TERM 1690 1177029 - 1177062 + T 82 -8.4 -4.386 | opp_overlap 1177024 1177021 1177029 GAAATAACAATAAAA CTTACAAACAATAT GAAAAA ATACTGTTTGTAAG TTTTATGAAAAGTTA CPE0977 1178044 - 1177094 - | hypothetical protein CPE0978 1179097 - 1178435 - | hypothetical protein TERM 1691 1179495 - 1179477 - R 73 -9 -2.86965 | opp_overlap 1179471 1179477, overlap 1179476 AAACTTAAGTGAAAG TCCAAATT TTC AATTTGGA TTCTTGAACTTATGC TERM 1692 1179477 - 1179495 + r 79 -9 -3.6968 | opp_overlap 1179477 1179476, overlap 1179471 AAACTTAAGTGAAAG TCCAAATT TTC AATTTGGA TTCTTGAACTTATGC CPE0979 1180187 - 1179675 - | ferritin family protein TERM 1693 1180297 - 1180267 - R 72 -5 -4.92314 | overlap 1180254 1180281 ACTAATTTATAAAAA TTATTAACAGAA ATTATTA TTCTATTAATAA TAGATGGCAGTATCT CPE0980 1181155 - 1180337 - | transcriptional regulator CPE0981 1181316 - 1183148 + | glycosyl hydrolase, family 20 CPE0982 1183266 - 1183733 + | hypothetical protein TERM 1694 1183750 - 1183779 + T 85 -10.9 -2.82668 | opp_overlap 1183737 1183750 1183757, overlap 1183757 AATTAATTATAAAAA TTAAAAACCAAGC TTTA GCTTGGTTTTTTA GTTTGCAGTTTAGAA TERM 1695 1183779 - 1183750 - T 100 -10.9 -5.00765 | opp_overlap 1183750 1183757, overlap 1183737 1183757 AATTAATTATAAAAA TTAAAAACCAAGC TTTA GCTTGGTTTTTTA GTTTGCAGTTTAGAA TERM 1696 1183772 - 1183757 - T 100 -9 -5.2197 | opp_overlap 1183750 1183757, overlap 1183750 TATAAAAATTAAAAA CCAAGC TTTA GCTTGG TTTTTTAGTTTGCAG TERM 1697 1183757 - 1183772 + T 100 -9 -5.37593 | opp_overlap 1183757 1183750, overlap 1183750 TATAAAAATTAAAAA CCAAGC TTTA GCTTGG TTTTTTAGTTTGCAG CPE0983 1184630 - 1183854 - | hypothetical protein spoVAF 1186167 - 1184746 - | stage V sporulation protein AF TERM 1698 1185012 - 1185026 + g 74 -7.2 -3.96148 | opp_overlap 1185024 CTAGTGTAACTATGG CCATAT ATA ATATGG TTTGTGGTAAAAACC CPE0985 1187905 - 1186397 - | hypothetical protein CPE0986 1188307 - 1190178 + | two-component sensor histidine kinase TERM 1699 1190210 - 1190181 - f 93 -10.9 -3.30771 | opp_overlap 1190167 1190186, overlap 1190186 TTATAGCCTTTAGAA GAAAAGCTGTATC AATT GATACAGCTTTTT ATTTTTTATTATACT TERM 1700 1190205 - 1190186 - f 100 -10.8 -4.77165 | opp_overlap 1190167 1190186, overlap 1190181 GCCTTTAGAAGAAAA GCTGTATC AATT GATACAGC TTTTTATTTTTTATT TERM 1701 1190186 - 1190205 + F 100 -10.8 -5.84011 | opp_overlap 1190181 1190186, overlap 1190167 GCCTTTAGAAGAAAA GCTGTATC AATT GATACAGC TTTTTATTTTTTATT TERM 1702 1190345 - 1190373 + F 91 -10.7 -3.55761 | opp_overlap 1190344 1190341, overlap 1190336 CTGTTGTAAAATGAT TTTAATAATAAAA TGA TTTTATTATTAAA TTTAAAAAATACATA pfoS 1190402 - 1191469 + | regulatory protein sdhB 1191501 - 1192181 + | L-serine dehydratase beta subunit TERM 1703 1192610 - 1192588 - g 82 -10.8 -2.72881 | opp_overlap 1192588 1192592, overlap 1192587 1192592 CAGCTAAGGAAAGAT TAAATCTTCA AGA TGAAGATTTA TTATATGGACTTTTA TERM 1704 1192588 - 1192610 + G 90 -10.8 -3.54721 | opp_overlap 1192588 1192587 1192592, overlap 1192592 CAGCTAAGGAAAGAT TAAATCTTCA AGA TGAAGATTTA TTATATGGACTTTTA TERM 1705 1192606 - 1192592 - g 75 -7.2 -4.04326 | opp_overlap 1192588 1192592, overlap 1192588 1192587 TAAGGAAAGATTAAA TCTTCA AGA TGAAGA TTTATTATATGGACT TERM 1706 1192592 - 1192606 + G 79 -7.2 -4.39329 | opp_overlap 1192592 1192588 1192587, overlap 1192588 TAAGGAAAGATTAAA TCTTCA AGA TGAAGA TTTATTATATGGACT sdhA 1192185 - 1193063 + | L-serine dehydratase alpha subunit TERM 1707 1193104 - 1193127 + T 100 -12.6 -4.91084 | opp_overlap 1193104 GTATTTACAAAAAAA GTGTACAAGT ATTA ACTTGTACAC TTTTTACATTTTCTT TERM 1708 1193127 - 1193104 - T 100 -12.6 -5.64274 | opp_overlap 1193104 GTATTTACAAAAAAA GTGTACAAGT ATTA ACTTGTACAC TTTTTACATTTTCTT CPE0990 1193865 - 1193131 - | hypothetical protein TERM 1709 1194030 - 1194049 + H 73 -2.3 -5.75342 | opp_overlap 1194024 1194030 TATTAAAATTAAAAA TTTAAAT TTATAT ATTTAAA TTTTTTTTGAAAGGA truA 1194072 - 1194818 + | tRNA pseudouridine synthase A TERM 1710 1194879 - 1194825 - T 100 -9.2 -4.96388 | opp_overlap 1194825 AATTATTAAATAAAA TCTGTATAAAAGAGTA-TAAATACTA ATTAA TAGT-TTAACTACTCTTTTATACAGA TTATTTTATGCTTCT TERM 1711 1194825 - 1194879 + T 93 -9.2 -4.39226 | opp_overlap 1194825 AATTATTAAATAAAA TCTGTATAAAAGAGTA-TAAATACTA ATTAA TAGT-TTAACTACTCTTTTATACAGA TTATTTTATGCTTCT CPE0992 1195952 - 1194885 - | oxidoreductase, 2-nitropropane dioxygenase family TERM 1712 1196013 - 1195987 - H 93 -6.8 -5.85011 | opp_overlap 1195987 1195991 TAAAAATTAAAAAAA CAAATATTTTGA TTA TTAAAATATTTG AATATAAATATATTA TERM 1713 1196453 - 1196478 + G 71 -7.7 -3.39897 | opp_overlap 1196452, overlap 1196451 AATGAGGGAGGAATT TCATTTAATGC TATT GCTTTAAATGA TGTTATAGTTTGTGC CPE0993 1196153 - 1196863 + | transcriptional regulator TERM 1714 1196892 - 1196848 - T 100 -16.3 -4.06185 | opp_overlap 1196848 1196853, overlap 1196853 CATAGAAAGATTAAA TAAAATAATTTCATAGGAA TAAGTGT TTCCTATGAAATTATTTTA TTTTTAGAAAAAATC TERM 1715 1196848 - 1196892 + T 100 -16.3 -4.57073 | opp_overlap 1196848 1196853, overlap 1196853 CATAGAAAGATTAAA TAAAATAATTTCATAGGAA TAAGTGT TTCCTATGAAATTATTTTA TTTTTAGAAAAAATC TERM 1716 1196887 - 1196853 - T 100 -11.8 -5.00923 | opp_overlap 1196848 1196853, overlap 1196848 AAAGATTAAATAAAA TAATTTCATAGGAA TAAGTGT TTCCTATGAAATTA TTTTATTTTTAGAAA TERM 1717 1196853 - 1196887 + T 100 -11.8 -5.26119 | opp_overlap 1196853 1196848, overlap 1196848 AAAGATTAAATAAAA TAATTTCATAGGAA TAAGTGT TTCCTATGAAATTA TTTTATTTTTAGAAA CPE0994 1197830 - 1196919 - | radical SAM domain protein TERM 1718 1198638 - 1198617 - g 78 -3.1 -5.60556 | AATATAAAACAAAAA TCTTTATAT CTGT ATATGAAGA GGTAGGACATGGAGC CPE0995 1197974 - 1199008 + | glucanase TERM 1719 1199036 - 1199068 + F 100 -10.8 -5.57054 | AATTAACAAATTTGA GTCATCTAAAAGTG AAAAA TACTTTTAGGTGAC TTTTTTTAGATTATT CPE0996 1199327 - 1199998 + | hypothetical protein CPE0997 1200014 - 1201693 + | hypothetical protein TERM 1720 1202006 - 1201983 - f 71 -8.4 -2.94076 | opp_overlap 1201974 1201983, overlap 1201976 1201982 TTATGATATAATAAT TTATGAAATA ATTA TATTTCATAA TGGTAATATTTTTGT TERM 1721 1202243 - 1202257 + F 71 -8.6 -2.95116 | overlap 1202240 ATTGATTATGAGTGA GTTAGC TTA GCTAAC TAATTTAGGTGGTAA TERM 1722 1202315 - 1202285 - f 90 -11.2 -3.18199 | opp_overlap 1202285 TAACGCGGAAGTTAA GTCTTTCGTCCTAA TTT TTAGGACGAGGGAC TTTTTTTATTACATA TERM 1723 1202285 - 1202315 + F 100 -15.6 -5.8187 | opp_overlap 1202285 TAACGCGGAAGTTAA GTCTTTCGTCCTAA TTT TTAGGACGAGGGAC TTTTTTTATTACATA TERM 1724 1203144 - 1203159 + G 70 -6.2 -4.11216 | opp_overlap 1203143 TCACTTCCAATACAT CTTCAA ATGT TTGAAG TTTTAGGAGTAGAAG gltX 1202355 - 1203995 + | glutamyl-tRNA synthetase TERM 1725 1204155 - 1204111 - f 70 -6.2 -4.20883 | gap 1, opp_overlap 1204122 1204135, overlap 1204122 GAAAAAGCTTTAAAA GATGAATAA-AATTTTCCTTA AACT TAAAGAAAATTTTTATTAATC CATTTAAATCTTTAA TERM 1726 1204143 - 1204122 - f 73 -5.3 -4.82518 | opp_overlap 1204122 1204135, overlap 1204111 AAAAGATGAATAAAA TTTTCCTTA AACT TAAAGAAAA TTTTTATTAATCCAT CPE0999 1204190 - 1204345 + | hypothetical protein TERM 1727 1204386 - 1204363 - f 95 -12.6 -3.40522 | opp_overlap 1204363 ATTTGTTTATTATAA GGTTGTAAGA TTAG TCTTACAACC TTTTTTATTTTTATA TERM 1728 1204363 - 1204386 + F 100 -12.6 -5.98675 | opp_overlap 1204363 ATTTGTTTATTATAA GGTTGTAAGA TTAG TCTTACAACC TTTTTTATTTTTATA CPE1000 1204572 - 1205186 + | hypothetical protein TERM 1729 1205172 - 1205217 + T 100 -15.2 -3.3907 | opp_overlap 1205177 1205184, overlap 1205177 ATTGGATATAGAATG GAAAAGCTAAAATAGTAGTT TAGAAT AACTACTATTTTAGCTTTTA TTAATTAAAGTTTAA TERM 1730 1205212 - 1205177 - T 100 -15.1 -4.3487 | opp_overlap 1205172 1205177, overlap 1205184 ATATAGAATGGAAAA GCTAAAATAGTAGTT TAGAAT AACTACTATTTTAGC TTTTATTAATTAAAG TERM 1731 1205177 - 1205212 + T 100 -15.1 -4.78572 | opp_overlap 1205177 1205184, overlap 1205172 ATATAGAATGGAAAA GCTAAAATAGTAGTT TAGAAT AACTACTATTTTAGC TTTTATTAATTAAAG TERM 1732 1205205 - 1205184 - T 72 -6 -4.43272 | opp_overlap 1205177 1205172, overlap 1205177 ATGGAAAAGCTAAAA TAGTAGTT TAGAAT AACTACTA TTTTAGCTTTTATTA CPE1001 1206902 - 1205280 - | aspartate aminotransferase TERM 1733 1206535 - 1206545 + g 76 -5.4 -5.04601 | TATAGGAAATCATCG GGAT TAA ATCC TTTTTCCTTTATGCC TERM 1734 1206877 - 1206888 + g 74 -3 -5.4182 | ATTTTTTTTAGTTCT TCTA ATTG TAGA TTTTTATTTGTCATT CPE1002 1208056 - 1207034 - | hypothetical protein TERM 1735 1208208 - 1208234 + H 82 -9.8 -3.05266 | opp_overlap 1208211, overlap 1208205 1208211 TCAAAGATTTTTACA TAATATATATAA TTT TTATATATATTA TAATTTAATTCTCAT CPE1003 1208361 - 1208540 + | hypothetical protein TERM 1736 1208873 - 1208899 + G 71 -6.6 -3.92373 | AGAAACTTATGGATT CTTAGAAGTGAC ATG GTAACTACTAAG TTTATAAGTAAAATC hprK 1208552 - 1209475 + | HPr kinase/phosphorylase CPE1005 1209520 - 1210449 + | divalent cation transporter CPE1006 1210516 - 1211922 + | putative aminopeptidase 1 CPE1007 1212047 - 1212634 + | hypothetical protein CPE1008 1212707 - 1213570 + | hypothetical protein mgsA 1213738 - 1214097 + | methylglyoxal synthase CPE1010 1214278 - 1214613 + | hypothetical protein CPE1011 1214739 - 1214999 + | hypothetical protein TERM 1737 1215123 - 1215113 - g 82 -6.8 -4.96845 | opp_overlap 1215119 ATAAAAACAAACAAA GCAC CAG GTGC AATTGGACCTTATTC CPE1012 1215083 - 1215463 + | putative endoribonuclease L-PSP CPE1013 1215507 - 1215752 + | hypothetical protein TERM 1738 1215757 - 1215745 - T 83 -4.1 -5.86465 | overlap 1215756 AAGAATATAAAAAAA GCTTA TAA CAAGC ACAAAGAGCATATAG TERM 1739 1215846 - 1215820 - T 100 -14 -5.63517 | opp_overlap 1215820 TCTCTAAATAAAAAA GTGACTATATAA AAT TTATATAGTCAC TTTTTATCTTATTTA TERM 1740 1215820 - 1215846 + T 100 -14 -5.23765 | opp_overlap 1215820 TCTCTAAATAAAAAA GTGACTATATAA AAT TTATATAGTCAC TTTTTATCTTATTTA CPE1014 1218495 - 1215859 - | rubredoxin/flavodoxin/oxidoreductase TERM 1741 1218684 - 1218649 - R 77 -3.5 -5.69473 | opp_overlap 1218649 GAGATTATAAAAAAA TAATGGTAATTTG TCAGTTAAAC CATATTACCATTA TTTTAATCATTAATA CPE1015 1219542 - 1218700 - | hypothetical protein pabA 1219810 - 1220400 + | anthranilate synthase component II TERM 1742 1220826 - 1220808 - g 71 -7.6 -3.45757 | overlap 1220806 GATAATGTAATAATA TTTGATTT GAG AAATCAAA AAACATATATAACAG TERM 1743 1221359 - 1221377 + G 71 -6.8 -4.0098 | GGTATGCAAACCTTT TTCTGTGA AGG TTACAGAA TTATTTAAATTAGAG pabB 1220406 - 1221752 + | para-aminobenzoate synthase, component I CPE1018 1221806 - 1222540 + | 4-amino-4-deoxychorismate lyase folE 1222555 - 1223112 + | GTP cyclohydrolase I CPE1020 1223137 - 1223610 + | hypothetical protein folP 1223623 - 1224432 + | dihydropteroate synthase TERM 1744 1224742 - 1224727 - g 70 -6.2 -4.10795 | GTAAAAAAAGTGAAA GTTTCT TTAA AGAAAC CATGGGCACCTATAT folA/folK 1224445 - 1225266 + | dihydroneopterin aldolase/ 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1745 1225292 - 1225331 + T 100 -8.2 -6.04419 | opp_overlap 1225292 TCTATTATTAATAAA GATATAGAATTTAGTA TAAATCAC TACTAAATCCTATATC TTTTTTTATTGTTTT TERM 1746 1225331 - 1225292 - T 95 -10.4 -4.2704 | opp_overlap 1225292 TCTATTATTAATAAA GATATAGAATTTAGTA TAAATCAC TACTAAATCCTATATC TTTTTTTATTGTTTT CPE1023 1225807 - 1225337 - | hypothetical protein TERM 1747 1225774 - 1225794 + g 91 -4.9 -5.94713 | GAGAAAAACATAGGG TTATTAAAA ATA TTTTAGTAA TTTTTTTTATCAAAT CPE1024 1225922 - 1226362 + | hypothetical protein TERM 1748 1227813 - 1227761 - g 100 -11.8 -4.77438 | gap 1, opp_overlap 1227770, overlap 1227768 1227770 AGTTATTATCAAAAA TAAAA-AAGAGATCAAAGAGAGTCT AAAA AGACTTTCTTTGATCTTTTATTTTA GATTTTTGTATAAGT pykA 1226692 - 1227786 + | pyruvate kinase TERM 1749 1227805 - 1227768 - T 100 -11.5 -5.95286 | opp_overlap 1227770, overlap 1227761 1227770 ATCAAAAATAAAAAA GAGATCAAAGAGAGTCT AAAA AGACTTTCTTTGATCTT TTATTTTAGATTTTT TERM 1750 1227770 - 1227803 + T 100 -16.3 -5.14698 | opp_overlap 1227768 1227761 1227770 CAAAAATAAAAAAGA GATCAAAGAGAGTCT AAAA AGACTTTCTTTGATC TTTTATTTTAGATTT TERM 1751 1227803 - 1227770 - T 100 -14.1 -4.585 | opp_overlap 1227770, overlap 1227768 1227761 CAAAAATAAAAAAGA GATCAAAGAGAGTCT AAAA AGACTTTCTTTGATC TTTTATTTTAGATTT CPE1026 1228340 - 1227783 - | hypothetical protein CPE1027 1228514 - 1229965 + | hypothetical protein TERM 1752 1229970 - 1229953 - T 79 -4.1 -5.79595 | opp_overlap 1229954, overlap 1229954 TTGGAAAATAAAAAA GCAGACT TTTT AGTCTGT TTTTTTATTTAAAGA TERM 1753 1229954 - 1229969 + T 100 -7.6 -5.95539 | opp_overlap 1229953 1229954 TGGAAAATAAAAAAG CAGACT TTTT AGTCTG TTTTTTTATTTAAAG TERM 1754 1229969 - 1229954 - T 77 -7.6 -4.0613 | opp_overlap 1229954, overlap 1229953 TGGAAAATAAAAAAG CAGACT TTTT AGTCTG TTTTTTTATTTAAAG CPE1028 1230303 - 1229962 - | hypothetical protein CPE1029 1230709 - 1230323 - | hypothetical protein TERM 1755 1230652 - 1230634 - G 70 -5.4 -4.56597 | TTTTGGCTGCAAAAA TTGAAATA AGA TATCTCAA GGATGCACCTAAAAA TERM 1756 1230922 - 1230902 - H 76 -8.5 -3.82067 | overlap 1230895 TACAAAAATTTCAAA CTTTTTAAA ATA TTTAAAAAG TTAACAGAATATATA CPE1030 1231228 - 1232676 + | hypothetical protein TERM 1757 1232688 - 1232721 + F 100 -9.9 -5.86965 | gap 1, opp_overlap 1232681 1232688 1232696, overlap 1232696 ATAATAAATTTTAAA TATAAAAAGAGTGGTT TTA AGCCACTCTTTTT-TA TTTTTTTTAATAAAT TERM 1758 1232721 - 1232688 - f 73 -7.7 -3.77136 | gap 1, opp_overlap 1232688 1232696, overlap 1232681 1232696 ATAATAAATTTTAAA TATAAAAAGAGTGGTT TTA AGCCACTCTTTTT-TA TTTTTTTTAATAAAT TERM 1759 1232696 - 1232714 + F 100 -9.6 -6.17033 | opp_overlap 1232696 1232688, overlap 1232688 TTTTAAATATAAAAA GAGTGGTT TTA AGCCACTC TTTTTTATTTTTTTT TERM 1760 1232714 - 1232696 - f 87 -7.4 -5.19879 | opp_overlap 1232688 1232696, overlap 1232688 TTTTAAATATAAAAA GAGTGGTT TTA AGCCACTC TTTTTTATTTTTTTT CPE1031 1232895 - 1233629 + | transcriptional regulator TERM 1761 1233693 - 1233719 + F 100 -9.6 -5.63517 | opp_overlap 1233693 GAAAACTACTAAAAA GGTATTACATTT TAA AGATGTAGTACC TTTTTTATTTAAAAA TERM 1762 1233719 - 1233693 - f 70 -5.2 -4.86773 | opp_overlap 1233693 GAAAACTACTAAAAA GGTATTACATTT TAA AGATGTAGTACC TTTTTTATTTAAAAA CPE1032 1233841 - 1235157 + | amidohydrolase family protein CPE1033 1236103 - 1235303 - | choline/ethanolamine kinase family protein TERM 1763 1235977 - 1235964 - G 70 -3.9 -5.17488 | opp_overlap 1235964 AATATTAAAACAAAA TTTTC CTCT GAAAA ATTATTTTTATTATC TERM 1764 1236441 - 1236431 - g 82 -4 -5.64421 | ACTTCAAACAAAAAA CTTT ATA AAAG GTACTACGGGAGTAG cobT 1236168 - 1237253 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CPE1035 1237291 - 1237851 + | hypothetical protein cobS 1237835 - 1238590 + | cobalamin synthase CPE1037 1238604 - 1238984 + | hypothetical protein cobC 1238989 - 1239633 + | alpha-ribazole-5'-phosphate phosphatase cbiB 1239636 - 1240583 + | cobalamin biosynthesis protein CPE1040 1240580 - 1241644 + | threonine-phosphate decarboxylase TERM 1765 1241957 - 1241978 + F 80 -3 -6.14618 | opp_overlap 1241948 TTTAAATATGCTTAA CATACCTT CTTAAA ATGGTATG TTTTTTTATTTTATA CPE1041 1242218 - 1243135 + | iron ABC transporter TERM 1766 1243185 - 1243146 - gf 81 -3.9 -5.55855 | opp_overlap 1243146 1243149, overlap 1243147 1243182 TCTAAAAAAAGAAAA CTACTAATATTACTA GCTATTCCAT TAGTAATATTAGTAC TCTGTATTGGAACTT TERM 1767 1243184 - 1243147 - gf 74 -7.4 -3.91073 | opp_overlap 1243146 1243149, overlap 1243146 1243182 CTAAAAAAAGAAAAC TACTAATATTACTA GCTATTCCAT TAGTAATATTAGTA CTCTGTATTGGAACT TERM 1768 1243190 - 1243218 + GF 100 -17.7 -3.32498 | opp_overlap 1243182, overlap 1243212 AATATTAGTACTCTG TATTGGAACTTCC ATA GGAAGTTCCAATA TTAATATATGGGATA TERM 1769 1243487 - 1243523 + GF 72 -4.6 -4.98522 | overlap 1243476 1243486 1243512 TCTTGGAATTTCAAT TCCTGTAATAGGAA ATTTAGCTA TGCCTATTATAGGA TTTTTATGTGGAGTT CPE1042 1243122 - 1244153 + | iron ABC transporter CPE1043 1244119 - 1244913 + | iron(III) dicitrate transport system TERM 1770 1245452 - 1245436 - g 74 -6.5 -4.49756 | opp_overlap 1245436 GTTGAAAGATTAAAA GCAGCTG GTT CAGATGC TTGTGGAGAAAATGG CPE1044 1244923 - 1245576 + | hypothetical protein TERM 1771 1245740 - 1245724 - g 75 -9.5 -2.89965 | overlap 1245723 AATATATCATTAAAT TCCTTTG TAA CAAAGGA GGGGGATGAAATAGG cbiP 1245586 - 1247049 + | cobyric acid synthase CobQ TERM 1772 1247057 - 1247088 + F 100 -7.5 -5.46706 | opp_overlap 1247057 GATCTTAATTTTAAA CAGTGTATTAATT TTTATT ATTTAATACACTG TTTTTATTTTAAAGT TERM 1773 1247088 - 1247057 - f 73 -7.5 -3.66654 | opp_overlap 1247057 GATCTTAATTTTAAA CAGTGTATTAATT TTTATT ATTTAATACACTG TTTTTATTTTAAAGT CPE1046 1247325 - 1253222 + | hypothetical protein CPE1047 1253315 - 1253764 + | hypothetical protein TERM 1774 1253787 - 1253817 + F 100 -13.6 -5.15167 | opp_overlap 1253784 1253777 1253787 TGAAATTATTAATTA GGTTTATAAGAGAT AAA ATCTTTTATAAACC TTTTTATTAGTCATA TERM 1775 1253817 - 1253787 - f 85 -11.4 -2.83273 | opp_overlap 1253787, overlap 1253784 1253777 TGAAATTATTAATTA GGTTTATAAGAGAT AAA ATCTTTTATAAACC TTTTTATTAGTCATA CPE1048 1253987 - 1254430 + | hypothetical protein TERM 1776 1254791 - 1254777 - g 89 -4.4 -5.95539 | GCTTAAAGAAAAAAA TAAAAA GGA TTTTTA TCAAATAGAGAAATA CPE1049 1254652 - 1255818 + | hypothetical protein TERM 1777 1255952 - 1255918 - f 100 -13.1 -4.12599 | opp_overlap 1255918 AATAAGTTTTTAAAA CAGAGAGGAAAGT TTTTAAATT ACTTTCCTCTCTG TTTTTGGATTGTTAT TERM 1778 1255918 - 1255952 + F 100 -13.1 -4.82333 | opp_overlap 1255918 AATAAGTTTTTAAAA CAGAGAGGAAAGT TTTTAAATT ACTTTCCTCTCTG TTTTTGGATTGTTAT CPE1050 1256109 - 1256909 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 1779 1256939 - 1256918 - T 100 -10.3 -5.8187 | opp_overlap 1256918 TATGTAATAAAAAAA TCCAACTTA AAAT TAAGTTGGA TTTTTTATTATTAAA TERM 1780 1256918 - 1256939 + T 100 -10.3 -5.64873 | opp_overlap 1256918 TATGTAATAAAAAAA TCCAACTTA AAAT TAAGTTGGA TTTTTTATTATTAAA cfa 1258444 - 1257260 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 1781 1258096 - 1258108 + g 81 -2.7 -5.81622 | overlap 1258087 TACCTATATCATAGT GATGT GCT ATATC TTTTTTTGATTTTAT CPE1052 1258777 - 1260132 + | putative thiosulfate sulfurtransferase CPE1053 1260136 - 1260561 + | hypothetical protein TERM 1782 1260570 - 1260602 + F 91 -7.2 -5.58522 | TAAATAACAAAAAAA CAAATCATCTTAGT ATTTA ATTAAGGTGGTTTG TTTTTATTTTGTCTA CPE1054 1260786 - 1261025 + | hypothetical protein CPE1055 1261234 - 1262004 + | endonuclease/exonuclease/phosphatase family protein hisB 1262188 - 1263012 + | histidinol-phosphatase TERM 1783 1263102 - 1263074 - T 78 -7.7 -4.20817 | overlap 1263096 GAGATTTTAAAATAA TTATCTATAAAGT TTT AATTTATAGATAA TAAAAAAGCACAAGG TERM 1784 1263146 - 1263096 - T 100 -18.8 -2.54387 | opp_overlap 1263110, overlap 1263074 1263110 TAAAGTTTTAATTTA TAGATAATAAAAAAGCACAAGGAA TAA TTCCTTGTGCTTTTTTATTAATTA CCGTATATAATTTTT TERM 1785 1263132 - 1263110 - T 100 -15 -5.62045 | opp_overlap 1263110, overlap 1263096 ATAGATAATAAAAAA GCACAAGGAA TAA TTCCTTGTGC TTTTTTATTAATTAC TERM 1786 1263110 - 1263132 + T 100 -15 -5.5604 | opp_overlap 1263096 1263110 ATAGATAATAAAAAA GCACAAGGAA TAA TTCCTTGTGC TTTTTTATTAATTAC CPE1057 1264561 - 1263140 - | tetratricopeptide repeat protein TERM 1787 1264699 - 1264722 + r 73 -5.5 -4.84311 | AAACTATGTCAATGT TCTTATTTT TTTTAC AAAATAAGA TTTTATTATATAAAA nadE 1266582 - 1264921 - | NAD synthetase CPE1059 1267144 - 1267557 + | hypothetical protein CPE1060 1267577 - 1268527 + | SPFH domain protein/band 7 family protein TERM 1788 1268588 - 1268613 + F 100 -9.1 -5.96894 | opp_overlap 1268585 GTAGGCATTAATTTT TCCCTTTGCTT TAAA GAGTAAAGGGA TTTTTTTATTTAGGT alr 1268707 - 1269759 + | alanine racemase TERM 1789 1269786 - 1269813 + F 100 -6.4 -6.47325 | opp_overlap 1269786 TATAGTTTTAAGAAA CATAAGGCTAAA CAAA TCTAGTCTTATG TTTTTTTTATTTTTT TERM 1790 1269813 - 1269786 - f 71 -6.4 -4.17556 | opp_overlap 1269786 TATAGTTTTAAGAAA CATAAGGCTAAA CAAA TCTAGTCTTATG TTTTTTTTATTTTTT CPE1062 1269992 - 1271026 + | hypothetical protein TERM 1791 1271164 - 1271154 - g 72 -6.8 -4.11484 | TTCAAGTGTTGAAAA TGCC GTG GGCA TGGGAATAGCTTCTA nqrD 1271044 - 1271712 + | SoxR-reducing system protein RsxE nqrE 1271741 - 1272316 + | Na-translocating NADH-quinone reductase CPE1065 1272333 - 1273139 + | ferredoxin CPE1066 1273220 - 1273720 + | cytidine/deoxycytidylate deaminase family protein TERM 1792 1273727 - 1273756 + F 100 -13.8 -4.08064 | opp_overlap 1273727 1273731, overlap 1273731 GATGTTTAAAATAAA TAAACCCCATAG TATTAT CTATGGGGTTTA TTTTAAGAGAAAGTT TERM 1793 1273756 - 1273727 - f 100 -13.8 -4.65933 | opp_overlap 1273727 1273731, overlap 1273731 GATGTTTAAAATAAA TAAACCCCATAG TATTAT CTATGGGGTTTA TTTTAAGAGAAAGTT TERM 1794 1273752 - 1273731 - f 100 -10.2 -4.8743 | opp_overlap 1273727 1273731, overlap 1273727 TTTAAAATAAATAAA CCCCATAG TATTAT CTATGGGG TTTATTTTAAGAGAA TERM 1795 1273731 - 1273752 + F 100 -10.2 -4.64861 | opp_overlap 1273731 1273727, overlap 1273727 TTTAAAATAAATAAA CCCCATAG TATTAT CTATGGGG TTTATTTTAAGAGAA TERM 1796 1273844 - 1273805 - f 83 -11.2 -2.66964 | opp_overlap 1273805 1273805 1273836, overlap 1273807 TTATTTAGTATAGTA TATTTTGAATATCAAA ATATTTGG TTTGATATTCAAAATA TTTGAATTTTATATC TERM 1797 1273805 - 1273844 + F 100 -11.2 -3.98312 | opp_overlap 1273805 1273807, overlap 1273805 1273836 TTATTTAGTATAGTA TATTTTGAATATCAAA ATATTTGG TTTGATATTCAAAATA TTTGAATTTTATATC TERM 1798 1273805 - 1273823 + F 77 -7.6 -4.14345 | opp_overlap 1273805 1273807, overlap 1273805 TTATTTAGTATAGTA TATTTTGA ATA TCAAAATA TTTGGTTTGATATTC TERM 1799 1273842 - 1273807 - f 76 -9.4 -2.87647 | opp_overlap 1273805 1273805 1273836, overlap 1273805 ATTTAGTATAGTATA TTTTGAATATCAAA ATATTTGG TTTGATATTCAAAA TATTTGAATTTTATA TERM 1800 1273836 - 1273850 + F 71 -5.8 -4.62984 | opp_overlap 1273807 1273805, overlap 1273805 ATATTTGGTTTGATA TTCAAA ATA TTTGAA TTTTATATCTAATGA CPE1067 1273892 - 1274356 + | MarR family transcriptional regulator TERM 1801 1274915 - 1274925 + G 71 -6.8 -3.94877 | overlap 1274912 1274923 ATCTGATGGTTCTAA GGGA GAT TCCC TTGTTATTCAGGGGT fabH 1274358 - 1275332 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1802 1276180 - 1276158 - g 71 -7.2 -3.85527 | overlap 1276159 GATAATATAATAGAA CTTTTAACTT CTC AAGTTAAAAA GCCTGTTTTATTTAT fabD 1275429 - 1276373 + | malonyl CoA-acyl carrier protein transacylase fabG 1276377 - 1277117 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabF 1277132 - 1278373 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1803 1278559 - 1278548 - g 82 -4.4 -5.61913 | AAGAAACAGAAAAAA CTGA TATA TCAG AAGAAAAAAATGAAT accB 1278385 - 1278876 + | acetyl-CoA carboxylase biotin carboxyl carrier protein fabZ 1278879 - 1279298 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ accC 1279310 - 1280662 + | biotin carboxylase TERM 1804 1280761 - 1280749 - f 73 -7.7 -3.76474 | overlap 1280747 ATGAAAAACCAAATA TACCC TCT GGGTA TGTGGAGCAAATGTG accD 1280827 - 1281534 + | acetyl-CoA carboxylase carboxyl transferase subunit beta accA 1281527 - 1282342 + | acetyl-CoA carboxylase carboxyl transferase subunit alpha TERM 1805 1282387 - 1282353 - T 79 -7.3 -4.63007 | opp_overlap 1282358, overlap 1282358 TATAATCATATAAAA TAAAACACATGAGTT TTTTT AGCTCATGTGTTTTT TAATTAAAATTAATT TERM 1806 1282382 - 1282358 - T 87 -7.2 -5.23292 | opp_overlap 1282358, overlap 1282353 TCATATAAAATAAAA CACATGAGTT TTTTT AGCTCATGTG TTTTTTAATTAAAAT TERM 1807 1282358 - 1282382 + T 100 -9.4 -5.27477 | opp_overlap 1282358 1282353 TCATATAAAATAAAA CACATGAGTT TTTTT AGCTCATGTG TTTTTTAATTAAAAT CPE1077 1282832 - 1282443 - | PadR family transcriptional regulator CPE1078 1282959 - 1283180 + | hypothetical protein TERM 1808 1283211 - 1283243 + T 100 -15.9 -4.78764 | opp_overlap 1283217 AAATATAGATTAGTT TTATAAGATAGGAGG TTT TCTCCTATCTTATAA TTTTTCATAAGTTTC TERM 1809 1283237 - 1283217 - T 87 -9.8 -3.3197 | opp_overlap 1283211 AGATTAGTTTTATAA GATAGGAG GTTTT CTCCTATC TTATAATTTTTCATA CPE1079 1283948 - 1283238 - | hypothetical protein TERM 1810 1283954 - 1283939 - G 71 -7.6 -3.40307 | overlap 1283938 CGGATCTAACAAAAG GAAGCT CCAT AGCTTC TAAGTCCTAATTTTT CPE1080 1284275 - 1284985 + | pseudouridylate synthase CPE1081 1284976 - 1285542 + | hypothetical protein CPE1082 1285574 - 1286449 + | RpiR family transcriptional regulator TERM 1811 1287567 - 1287541 - g 81 -7.4 -4.64598 | opp_overlap 1287529, overlap 1287554 TAAGGATTTTAAAAA TTCTTTAGATGA ACT TCTTCCAAAGAA ACTTATACCTGTTAT CPE1083 1286708 - 1287886 + | hypothetical protein cmk 1288009 - 1288662 + | cytidylate kinase TERM 1812 1289010 - 1289000 - g 75 -4 -5.2696 | CTAAAAGTTAAAAAA TGTT ATG AACA AGGATATAAGATAAT TERM 1813 1289182 - 1289172 - g 76 -5.4 -5.13354 | opp_overlap 1289172 CTGAGAAAAAAGAAA CTTG GAA CAAG GTTTTAAATGAAATA lytB 1288664 - 1289512 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CPE1086 1289622 - 1290416 + | hypothetical protein CPE1087 1290665 - 1290516 - | hypothetical protein CPE1088 1290802 - 1291374 + | hypothetical protein TERM 1814 1291408 - 1291358 - f 100 -15.3 -2.62912 | gap 1, opp_overlap 1291364 1291372, overlap 1291367 1291372 TTAAAAAATATATAT TTGATATAATAAAATAACCTTTGG TATT CCAAAGGTTATTTT-TTATTTCAA CATAATTTTACAATT TERM 1815 1291364 - 1291402 + F 95 -12.9 -3.60431 | gap 1, opp_overlap 1291358 1291367 1291372, overlap 1291372 AATATATATTTGATA TAATAAAATAACCTTTGG TATT CCAAAGGTTATTTT-TTA TTTCAACATAATTTT TERM 1816 1291400 - 1291367 - f 95 -12.7 -3.51633 | opp_overlap 1291364 1291372, overlap 1291358 1291372 ATATATTTGATATAA TAAAATAACCTTTGG TATT CCAAAGGTTATTTTT TATTTCAACATAATT TERM 1817 1291395 - 1291372 - f 100 -12.6 -4.84311 | opp_overlap 1291372 1291364, overlap 1291367 1291358 TTTGATATAATAAAA TAACCTTTGG TATT CCAAAGGTTA TTTTTTATTTCAACA TERM 1818 1291372 - 1291395 + F 100 -12.6 -5.63517 | opp_overlap 1291367 1291358 1291372, overlap 1291364 TTTGATATAATAAAA TAACCTTTGG TATT CCAAAGGTTA TTTTTTATTTCAACA CPE1089 1291513 - 1291977 + | hypothetical protein TERM 1819 1291978 - 1292019 + T 73 -7 -4.04587 | gap 1, opp_overlap 1291969 1291981 1291982, overlap 1291976 1291982 TATATAGAAGTTTAA TAACTCCTTAAGTATATTA CTATA TAATATACTTAAGGA-TAA TGTTTATTTTTCAAG TERM 1820 1292017 - 1291981 - T 95 -11.9 -3.70081 | opp_overlap 1291978 1291976 1291982, overlap 1291969 1291982 ATAGAAGTTTAATAA CTCCTTAAGTATATTAC TAT ATAATATACTTAAGGAT AATGTTTATTTTTCA TERM 1821 1292016 - 1291982 - T 100 -15.4 -2.81326 | opp_overlap 1291978 1291976 1291982, overlap 1291969 1291981 TAGAAGTTTAATAAC TCCTTAAGTATATTAC TAT ATAATATACTTAAGGA TAATGTTTATTTTTC TERM 1822 1291982 - 1292016 + T 100 -14.7 -3.04298 | opp_overlap 1291969 1291982 1291981, overlap 1291978 1291976 TAGAAGTTTAATAAC TCCTTAAGTATATTA CTATA TAATATACTTAAGGA TAATGTTTATTTTTC CPE1090 1292499 - 1292023 - | hypothetical protein TERM 1823 1292228 - 1292241 + g 70 -5.3 -4.5448 | opp_overlap 1292228 TGAAGGTCTATTATA GTACA GATC TGTAC TTCTTTTTGTGAATC TERM 1824 1292586 - 1292612 + r 90 -6.6 -5.66868 | opp_overlap 1292586 GGGAATATAAAAAAA CTAGAGAAGATA ATT TTTCTACTCTAG TTTTTTTACTTACTT TERM 1825 1292612 - 1292586 - R 90 -6.6 -5.80817 | opp_overlap 1292586 GGGAATATAAAAAAA CTAGAGAAGATA ATT TTTCTACTCTAG TTTTTTTACTTACTT CPE1091 1293069 - 1292677 - | hypothetical protein pac 1293432 - 1294415 + | choloylglycine hydrolase family protein TERM 1826 1294440 - 1294455 + F 95 -6.2 -6.09196 | opp_overlap 1294434 1294440 ACATAGCAATAAAAA GTCTTA GAAA TAAGAC TTTTTTTATTTTAAA TERM 1827 1294455 - 1294440 - f 80 -6.2 -5.17744 | opp_overlap 1294440, overlap 1294434 ACATAGCAATAAAAA GTCTTA GAAA TAAGAC TTTTTTTATTTTAAA TERM 1828 1294741 - 1294731 - g 72 -5.4 -4.73092 | opp_overlap 1294731 1294729 AGAACTGAAAATAAA GAAG AGG CTTC TATTATAATCTTTAA TERM 1829 1295512 - 1295499 - g 71 -3.1 -5.27476 | opp_overlap 1295499 1295494 1295508 1295511, overlap 1295494 1295506 GTTAAGAAAATAAAA TCTGA AATA CCAGA TGTTACTTTAACAAC TERM 1830 1295532 - 1295506 - g 71 -7.4 -3.81111 | opp_overlap 1295499 1295494 1295508 1295511 1295528, overlap 1295499 1295494 1295528 AAATAAAATCTGAAA TACCAGATGTTA CTT TAACAACTGATA TAATCATTGGATTCC CPE1093 1294599 - 1295942 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1831 1295946 - 1295989 + F 100 -11.2 -4.94992 | opp_overlap 1295950, overlap 1295950 ATAGTAGAATAATTT AAAAGTGGGATGTATCAATA GGAT TTTTGATACATCCCACTTAA TTTTTATAAATTTGC TERM 1832 1295950 - 1295985 + F 100 -16.4 -3.88603 | opp_overlap 1295950, overlap 1295946 TAGAATAATTTAAAA GTGGGATGTATCAATA GGAT TTTTGATACATCCCAC TTAATTTTTATAAAT TERM 1833 1295985 - 1295950 - f 100 -16.4 -4.37734 | opp_overlap 1295950 1295946 TAGAATAATTTAAAA GTGGGATGTATCAATA GGAT TTTTGATACATCCCAC TTAATTTTTATAAAT CPE1094 1296398 - 1298011 + | phosphoenolpyruvate carboxylase TERM 1834 1298142 - 1298196 + F 95 -11.9 -3.37071 | opp_overlap 1298132 1298149, overlap 1298149 TTAAATTTATAGAGT TATAAAACACTTCTTGTTAATTAGT TTTTT GCTAATTAATAGGAGGTGTTTTTTA TTATGGCTAGGATTT TERM 1835 1298149 - 1298189 + F 100 -10 -5.56673 | opp_overlap 1298149, overlap 1298142 TATAGAGTTATAAAA CACTTCTTGTTAATTAGT TTTTT GCTAATTAATAGGAGGTG TTTTTTATTATGGCT CPE1095 1298199 - 1299215 + | integrase/recombinase TERM 1836 1299245 - 1299221 - f 100 -8.7 -5.4477 | opp_overlap 1299221 AAATTGGTAAAAAAA TAGTAGGCACT CAC AATACCTACTA TTTAAAAATTTGCAT CPE1096 1299873 - 1300172 + | hypothetical protein TERM 1837 1300242 - 1300262 + T 70 -4 -5.18726 | CCAACTTAGATATAT GCTGCATG TTATT TATGTAGC TTTTTCTTATGCAAA TERM 1838 1300309 - 1300282 - T 100 -7.8 -5.47218 | opp_overlap 1300285 TCTTATGCAAAAAAA TAAGACCTAGCC ATAA GACTAGATCCTA TCTTTATTCTTCATC CPE1097 1300525 - 1300313 - | transcriptional regulator CPE1098 1300712 - 1301176 + | hypothetical protein CPE1099 1301201 - 1301503 + | hypothetical protein CPE1100 1301594 - 1302286 + | hypothetical protein CPE1101 1302323 - 1302556 + | hypothetical protein CPE1102 1302601 - 1303431 + | hypothetical protein TERM 1839 1303476 - 1303455 - f 79 -7.3 -4.5852 | opp_overlap 1303455 TAATTTAAATCAAAA GGCTTATAC CCAG GTATGAGCC TTATAATAACTAAAA TERM 1840 1303455 - 1303476 + F 82 -9.5 -3.4252 | opp_overlap 1303455 TAATTTAAATCAAAA GGCTTATAC CCAG GTATGAGCC TTATAATAACTAAAA TERM 1841 1305971 - 1305961 - g 72 -4 -5.10029 | AGTAATGTTAAAAAA TTAG CAG CTAA AAGTAATGATTCATT CPE1103 1303501 - 1306695 + | hypothetical protein TERM 1842 1307029 - 1307005 - g 100 -12.3 -4.81083 | opp_overlap 1307003 GGTAATCATCAAAAA GTGAAGCAAGA TAA TCTTACTTCAC AATATTCACAAAAAG CPE1104 1306795 - 1307226 + | hypothetical protein TERM 1843 1307460 - 1307436 - g 76 -8.7 -3.38656 | opp_overlap 1307441, overlap 1307437 1307441 GGAGGAGATAGAAGA TCAAACCAAAA AAT TTTTGGTTTGG TTACCCAAGAACAAA TERM 1844 1307459 - 1307437 - g 100 -12.2 -2.62712 | opp_overlap 1307441, overlap 1307436 1307441 GAGGAGATAGAAGAT CAAACCAAAA AAT TTTTGGTTTG GTTACCCAAGAACAA TERM 1845 1307455 - 1307441 - g 74 -7.2 -3.99878 | opp_overlap 1307441, overlap 1307437 1307436 AGATAGAAGATCAAA CCAAAA AAT TTTTGG TTTGGTTACCCAAGA TERM 1846 1307441 - 1307455 + G 74 -7.2 -3.90112 | opp_overlap 1307437 1307436 1307441 AGATAGAAGATCAAA CCAAAA AAT TTTTGG TTTGGTTACCCAAGA CPE1105 1307241 - 1307561 + | hypothetical protein TERM 1847 1307721 - 1307706 - g 85 -4.8 -5.51046 | TAAATACACAAAAAA TAAGAA ACTA TTCTTA GCTTTAGTAGAATTT CPE1106 1307575 - 1307745 + | hypothetical protein CPE1107 1307775 - 1308695 + | hypothetical protein CPE1108 1309065 - 1309247 + | hypothetical protein TERM 1848 1309384 - 1309405 + F 86 -3.8 -6.09888 | TCTATACCAATTAGA GATTACTA TTAATT TAGTAGTC TTTTTTTTATTACAA TERM 1849 1309828 - 1309844 + G 85 -8.1 -4.38843 | opp_overlap 1309828 1309827 1309821 ATTTAAAACAAGAAG TTGCTTA TTA TAAGCAA TTTGTTAGTGTTTTC TERM 1850 1309844 - 1309828 - g 70 -8.1 -3.124 | opp_overlap 1309828, overlap 1309827 1309821 ATTTAAAACAAGAAG TTGCTTA TTA TAAGCAA TTTGTTAGTGTTTTC CPE1109 1309449 - 1309904 + | hypothetical protein TERM 1851 1309890 - 1309910 + F 86 -5.4 -5.63504 | GATATAGAAGAATGG GAGTGGCT TAGAT AGACACTC TTTTTTTATACCCTT TERM 1852 1310313 - 1310285 - g 79 -5.3 -5.28683 | opp_overlap 1310291 ATGAAGATGAAAAAA TAAAGATGCCTTT TAA AATGGCGTCTTCA AGATCAACACAGTCT CPE1110 1310119 - 1311216 + | hypothetical protein CPE1111 1311231 - 1311389 + | hypothetical protein CPE1112 1311383 - 1311649 + | hypothetical protein CPE1113 1311688 - 1312071 + | hypothetical protein CPE1114 1312073 - 1312252 + | hypothetical protein CPE1115 1312258 - 1312500 + | hypothetical protein TERM 1853 1312795 - 1312780 - g 70 -6.2 -4.09822 | AAGGTATTATAGAAA TGTGTA CTAC TACACA TCACATAATAGAGTT CPE1116 1312560 - 1312970 + | hypothetical protein CPE1117 1312983 - 1313567 + | hypothetical protein CPE1118 1313567 - 1315243 + | phage-related terminase TERM 1854 1315294 - 1315318 + G 85 -2.9 -5.9003 | overlap 1315296 AATAAAATCTTATGG TCGGAGTTATT TAT AATAGCTTCTA TTTTTTTATTCATTT TERM 1855 1315296 - 1315316 + G 73 -5.5 -4.55661 | overlap 1315294 TAAAATCTTATGGTC GGAGTTATT TAT AATAGCTTC TATTTTTTTATTCAT CPE1119 1315252 - 1315425 + | hypothetical protein CPE1120 1315442 - 1316665 + | hypothetical protein CPE1121 1316640 - 1317242 + | phage phi-C31 gp35-like protein TERM 1856 1317231 - 1317252 + F 85 -5.9 -5.60993 | overlap 1317251 TTAGAAATTGAAGCA GAACTACTA TAAA TGGTGGTTC TTTTTTTATGAAAGG CPE1122 1317279 - 1318415 + | phage-related head protein TERM 1857 1318430 - 1318449 + F 100 -7.9 -5.55769 | opp_overlap 1318433 1318441 1318442 ATAAAAATAATTTTA GAAGGGA TTAATC TCCCTTC TTTTTTATTATAAGA CPE1123 1318478 - 1318771 + | hypothetical protein CPE1124 1318764 - 1319081 + | hypothetical protein CPE1125 1319082 - 1319525 + | hypothetical protein CPE1126 1319535 - 1319885 + | hypothetical protein CPE1127 1319901 - 1320500 + | hypothetical protein TERM 1858 1320525 - 1320498 - f 100 -10 -5.1485 | opp_overlap 1320501, overlap 1320501 GAACCAATAGAAAAA TAAGAAGGTAGA TTAT TCTACCTTCTTT TTTATTAGAAAGGAG TERM 1859 1320501 - 1320522 + F 100 -11.7 -5.4505 | opp_overlap 1320498 1320501 CCAATAGAAAAATAA GAAGGTAGA TTAT TCTACCTTC TTTTTTATTAGAAAG TERM 1860 1320522 - 1320501 - f 100 -11.7 -4.63863 | opp_overlap 1320501, overlap 1320498 CCAATAGAAAAATAA GAAGGTAGA TTAT TCTACCTTC TTTTTTATTAGAAAG CPE1128 1320548 - 1320853 + | hypothetical protein CPE1129 1321015 - 1321350 + | hypothetical protein CPE1130 1321368 - 1324169 + | hypothetical protein CPE1131 1324150 - 1324845 + | hypothetical protein TERM 1861 1326494 - 1326472 - g 81 -5.6 -5.31275 | opp_overlap 1326471 GGTTATGAGAAAAAA GAAGATACTA AAG TAGTGCCTTC CTATGTTCAATTCGA TERM 1862 1326865 - 1326881 + G 74 -8 -3.82484 | AAACCTTATGTGTGG GGTGGA AATTA TCCACC TTTAGGTTCTGATGT CPE1132 1324849 - 1327800 + | hypothetical protein TERM 1863 1327802 - 1327821 + F 87 -6.5 -5.4505 | opp_overlap 1327802 1327804 CAAGTCCATATTAGA GAGTAGA TTAATT TCTACTC TTTTTTATTACAAGA CPE1133 1327849 - 1329723 + | choline binding protein CPE1134 1329739 - 1331685 + | hypothetical protein CPE1135 1331702 - 1331944 + | hypothetical protein TERM 1864 1331973 - 1331986 + F 83 -3.1 -6.01187 | opp_overlap 1331960 1331957, overlap 1331960 AAGGAAATAAGTTAA GGCTA GAGA TAGTC TTTTTTTATTTCCTT CPE1136 1332026 - 1332205 + | hypothetical protein TERM 1865 1332400 - 1332413 + G 71 -2.4 -5.45802 | TATATTACTATATTT GCTA CTGTTA TAGC TTTTTATTTTGGACA CPE1137 1332271 - 1332474 + | hypothetical protein TERM 1866 1332461 - 1332484 + F 100 -8.2 -5.54907 | opp_overlap 1332461, overlap 1332483 GTAATAATAAGCAAG GGTTAGGAGA ATAA TCTCTTAGCC TTTTTGTTTTATAAG CPE1138 1332512 - 1333426 + | hypothetical protein TERM 1867 1333595 - 1333622 + T 100 -10 -5.09762 | opp_overlap 1333595 1333597 TAAGAAATTAGATTA TATGGTTAGGGA GTAA TCCTTAGCCATA TTTTTGTCTTAACAT TERM 1868 1334050 - 1334092 + T 100 -11.6 -5.50723 | ATTAAGTGTATTAAA GTACTTCTTATTAGTTAGTT TTT AGCTAATTAATAGGAGGTGC TTTTTATTTTAGTAA CPE1139 1334990 - 1334196 - | hypothetical protein TERM 1869 1335133 - 1335190 + H 79 -8.9 -3.62864 | opp_overlap 1335138, overlap 1335134 ATTTTTAGAACTCAG ATTAATTCTTTCATTTTTTCAGCAA ATATGAGA TTACTGCAAAAATGAAAGAATTAAA TTTAAAATCACTTTG TERM 1870 1335134 - 1335189 + H 89 -12.4 -2.77236 | opp_overlap 1335138, overlap 1335133 TTTTTAGAACTCAGA TTAATTCTTTCATTTTTTCAGCAA ATATGAGA TTACTGCAAAAATGAAAGAATTAA ATTTAAAATCACTTT TERM 1871 1335185 - 1335138 - H 93 -11 -3.30453 | opp_overlap 1335134 1335133 TAGAACTCAGATTAA TTCTTTCATTTTTTCAGCAA ATATGAGA TTACTGCAAAAATGAAAGAA TTAAATTTAAAATCA CPE1140 1335177 - 1335464 + | hypothetical protein TERM 1872 1335711 - 1335728 + F 70 -2.7 -5.56673 | TATAAATAATAGAGA GTATATC TATG GGTATGC TTTTTTCTTATGCCT CPE1141 1335992 - 1336501 + | hypothetical protein CPE1142 1336950 - 1337537 + | hypothetical protein TERM 1873 1337576 - 1337555 - f 95 -11.7 -3.80189 | opp_overlap 1337555 1337571 1337574 ATATAGTAATTTAAA GAGTATCCA AGAG TGGATACTC TTTTTTATATTTAAA TERM 1874 1337555 - 1337576 + F 100 -11.7 -5.56264 | opp_overlap 1337555, overlap 1337571 1337574 ATATAGTAATTTAAA GAGTATCCA AGAG TGGATACTC TTTTTTATATTTAAA CPE1143 1337651 - 1337983 + | hypothetical protein TERM 1875 1338017 - 1338065 + T 70 -4.7 -4.79223 | opp_overlap 1338022 AAAAGATGACAAATT TTAAAGAGGAGATAGTTTAGTGT GAA AAATAAAGCTATCTCCTCTAAAA TTTTTAATACTATGA TERM 1876 1338060 - 1338022 - T 70 -7 -3.74749 | gap 1, opp_overlap 1338017 ATGACAAATTTTAAA GAGGAGATAG-TTTAGT GTGAAA AATAAAGCTATCTCCTC TAAAATTTTTAATAC CPE1144 1339077 - 1338112 - | transcriptional regulator citG 1339986 - 1339126 - | CitG protein citC 1340264 - 1341301 + | citrate (pro-3S)-lyase ligase TERM 1877 1341353 - 1341340 - g 95 -8.1 -5.38497 | ATGGAAATTAAAAAA CCAGC TTTA GCTGG AACATTAGAATCAAG cilG 1341325 - 1341630 + | citrate lyase subunit gamma cilB 1341618 - 1342508 + | citrate lyase beta subunit cilA 1342512 - 1344071 + | citrate lyase alpha subunit TERM 1878 1344240 - 1344294 + G 70 -6.1 -4.07568 | gap 1, opp_overlap 1344254 1344289, overlap 1344243 1344254 TTGGATGAACTTTAT TATTATGCATTTAATGAAGCCACTAA GGCA TTGGAGGCTTCATTAAATATA-AATG TTTTAAAAGAAAGAG TERM 1879 1344243 - 1344292 + G 74 -8.1 -3.63744 | opp_overlap 1344254 1344289, overlap 1344240 1344254 GATGAACTTTATTAT TATGCATTTAATGAAGCCACTAA GGCA TTGGAGGCTTCATTAAATATAAA TGTTTTAAAAGAAAG TERM 1880 1344254 - 1344281 + G 76 -9.2 -3.14294 | opp_overlap 1344254, overlap 1344243 1344240 TTATTATGCATTTAA TGAAGCCACTAA GGCA TTGGAGGCTTCA TTAAATATAAATGTT TERM 1881 1344319 - 1344303 - g 88 -9.5 -4.13343 | ATAAATGTTTTAAAA GAAAGAG CTC CTCTTTC TGGATATGAAGCTTA CPE1150 1344090 - 1344602 + | triphosphoribosyl-dephospho-CoA synthase CPE1151 1344643 - 1345788 + | malate oxidoreductase TERM 1882 1345891 - 1345901 + G 70 -4 -4.8622 | overlap 1345882 ATCTTTTTGGGGTTC CAAT GTT ATTG TTTTTAGTTGGAGCA TERM 1883 1346576 - 1346564 - g 75 -4.1 -5.243 | overlap 1346575 TAAAGGAGCAAAAAA TGCAG AAT CTACA AAATCTAATTTTAAA citN 1345809 - 1347149 + | citrate/sodium symporter TERM 1884 1347179 - 1347220 + F 100 -12 -4.41895 | opp_overlap 1347179 1347182 TATTTAAATATTAAT TAAGAGAGATTTTATTTA AGTTAA TAAATAGAGTCTCTCTTA TTTTACTTGAAAATT TERM 1885 1347784 - 1347770 - g 75 -7.2 -4.07868 | opp_overlap 1347769 1347766 1347770 1347772 GGATATTTAGATAAA GATAAC GAA GTTATC GTTGGTTTCCAAACA pflA 1347518 - 1349752 + | formate acetyltransferase pflA 1350038 - 1350745 + | pyruvate formate-lyase activating enzyme TERM 1886 1350766 - 1350789 + F 100 -9 -5.4833 | opp_overlap 1350766 TTATTTAGATAAAAA CTAAAGTCTA ATTT TAGGCTTTAG TTTTTTCTTACATAA TERM 1887 1350789 - 1350766 - f 80 -6.8 -4.99035 | opp_overlap 1350766 TTATTTAGATAAAAA CTAAAGTCTA ATTT TAGGCTTTAG TTTTTTCTTACATAA mutS 1351007 - 1353736 + | DNA mismatch repair protein mutL 1353763 - 1355787 + | DNA mismatch repair protein miaA 1355805 - 1356737 + | tRNA delta(2)-isopentenylpyrophosphate transferase CPE1158 1356781 - 1357023 + | RNA chaperone Hfq TERM 1888 1357078 - 1357025 - f 71 -7.3 -3.9941 | gap 2, opp_overlap 1357040, overlap 1357040 TTTTTGATAATTAAA TATAGAAAAGAAAAATAGGTAAACC CTAGAT GGTTTGCCTAT-TTT-TTTTCTATA TGATAAGATTTATAA TERM 1889 1357065 - 1357040 - f 85 -6.2 -5.58522 | opp_overlap 1357040, overlap 1357025 TATAGAAAAGAAAAA TAGGTAAACC CTAGAT GGTTTGCCTA TTTTTTTTCTATATG TERM 1890 1357040 - 1357065 + F 100 -8.4 -6.06529 | opp_overlap 1357040 1357025 TATAGAAAAGAAAAA TAGGTAAACC CTAGAT GGTTTGCCTA TTTTTTTTCTATATG TERM 1891 1357187 - 1357164 - g 72 -5.4 -4.8487 | opp_overlap 1357161, overlap 1357184 TTACTAAAAAAACAA TATGGTTTCA CAGA TGAAACTATA AAGCTTTATAATCAA CPE1159 1357128 - 1358408 + | aluminum resistance protein TERM 1892 1359102 - 1359091 - g 74 -3 -5.34632 | overlap 1359085 AAGAAAATATAAAAA CTTT AGAA AAAG ATAAAAGTACTTTAT TERM 1893 1359118 - 1359102 - g 72 -4.5 -4.90296 | opp_overlap 1359102 AAAACTTTAGAAAAA GATAAAA GTA CTTTATC TCAATTAGTATCTAG TERM 1894 1359179 - 1359158 - g 85 -3.8 -5.80817 | opp_overlap 1359176 TTTAATAGAAAAAAA TAAAGAAG AAATAG CCTCTTTA AAATCTTTAGAATCT TERM 1895 1359382 - 1359371 - g 72 -4.4 -5.05079 | AGAATCATATAAAAA GCTT GTAG AAGC TATGAGAAAGGATCA CPE1160 1358667 - 1359572 + | hypothetical protein TERM 1896 1359722 - 1359687 - T 100 -7.9 -5.77677 | gap 1, opp_overlap 1359687 TAAAATAAGAAAAAA TGCTAGGAAATTTGTA ATGCA TA-AAATTCCCTAGCA TTTTTTCTTAATAAG TERM 1897 1359687 - 1359722 + T 82 -5.7 -5.5112 | gap 1, opp_overlap 1359687 TAAAATAAGAAAAAA TGCTAGGAAATTTGTA ATGCA TA-AAATTCCCTAGCA TTTTTTCTTAATAAG lexA 1360341 - 1359730 - | LexA repressor CPE1162 1360549 - 1360941 + | hypothetical protein TERM 1898 1360968 - 1361009 + T 100 -19.1 -3.16564 | opp_overlap 1360973, overlap 1360973 TTATATAAAAGTGCT AAAAATACGAGGATAGAAC ATAT GTTCTATCCTCGTATTTTC TTCATAAAATCAAGA TERM 1899 1361004 - 1360973 - T 100 -19 -4.66264 | opp_overlap 1360968 1360973 TAAAAGTGCTAAAAA TACGAGGATAGAAC ATAT GTTCTATCCTCGTA TTTTCTTCATAAAAT TERM 1900 1360973 - 1361004 + T 100 -19 -4.71828 | opp_overlap 1360973, overlap 1360968 TAAAAGTGCTAAAAA TACGAGGATAGAAC ATAT GTTCTATCCTCGTA TTTTCTTCATAAAAT xerC 1362384 - 1361032 - | site-specific tyrosine recombinase XerC TERM 1901 1361351 - 1361365 + g 73 -5.8 -4.55287 | GCTTTTGAATCATTT CTATTT TTC AAATAG TTTTCTATAGCTGCA TERM 1902 1361436 - 1361453 + g 74 -2 -5.56264 | overlap 1361421 CTTTACCTATAATAG TTAAGG TATCTC CCTTGA TTTTTTCTATTTCAA TERM 1903 1362480 - 1362449 - R 100 -14 -4.20875 | opp_overlap 1362452, overlap 1362444 TATCAAAAAACACAA CAACTTCGCTAAAT GTAT ATTTAGCGAAGTTA TAAATTGGGGATATT TERM 1904 1362452 - 1362477 + r 100 -13.5 -3.42056 | opp_overlap 1362449 1362444 CAAAAAACACAACAA CTTCGCTAAAT GTAT ATTTAGCGAAG TTATAAATTGGGGAT TERM 1905 1362605 - 1362566 - R 100 -17 -3.61268 | opp_overlap 1362563 1362561 1362571 1362604, overlap 1362571 1362604 CATTTAACTTTGAAA TATAATTTTTCATCAAAA AATC TTTTGATGAAAAATTATA AAGTGTTTATTTGAT TERM 1906 1362600 - 1362571 - R 95 -12.5 -3.82603 | opp_overlap 1362563 1362561 1362571, overlap 1362566 AACTTTGAAATATAA TTTTTCATCAAAA AATC TTTTGATGAAAAA TTATAAAGTGTTTAT TERM 1907 1362571 - 1362600 + r 95 -12.5 -3.3862 | opp_overlap 1362571 1362566, overlap 1362563 1362561 AACTTTGAAATATAA TTTTTCATCAAAA AATC TTTTGATGAAAAA TTATAAAGTGTTTAT TERM 1908 1362820 - 1362854 + r 72 -8.8 -2.63479 | opp_overlap 1362820, overlap 1362823 TATTAGAATGCAAAA TAATGAAGATAACTTA AAT TTAGCTATCTTCATTA TAATATAAGCATATT TERM 1909 1362854 - 1362820 - R 100 -11 -4.33151 | opp_overlap 1362820 1362823 TATTAGAATGCAAAA TAATGAAGATAACTTA AAT TTAGCTATCTTCATTA TAATATAAGCATATT CPE1164 1363100 - 1362882 - | hypothetical protein TERM 1910 1364040 - 1364085 + G 74 -8.6 -3.23452 | gap 2, opp_overlap 1364039 1364040 TGAAAAACATAAACT TTTAGCAGAAGCTTC-AG-GAG CAGT CTCATTAGCAGCTTCTGCTAAA TTAAATTGTAAAGAT thd 1363219 - 1364427 + | threonine dehydratase, catabolic TERM 1911 1364461 - 1364443 - T 90 -6.7 -5.79595 | opp_overlap 1364443 TTTTAAAATAAAAAA GAGGTGA AAAAA CCACCTC TTTTTTTAGTAAGAA TERM 1912 1364443 - 1364461 + T 85 -6 -5.52384 | opp_overlap 1364443 TTTTAAAATAAAAAA GAGGTG AAAAAAC CACCTC TTTTTTTAGTAAGAA CPE1166 1365936 - 1364467 - | lysine specific permease TERM 1913 1366034 - 1366008 - H 100 -13.8 -4.87892 | opp_overlap 1366008 1365999 CGCTAACAAAAGAAA CCCTTAAGCGTG TTT CATGCTTAAGGG TTCGTAAAGTTATAT TERM 1914 1366008 - 1366034 + H 100 -16 -3.19921 | opp_overlap 1366008, overlap 1365999 CGCTAACAAAAGAAA CCCTTAAGCGTG TTT CATGCTTAAGGG TTCGTAAAGTTATAT CPE1167 1366440 - 1367660 + | glutamate/ aspartate transporter TERM 1915 1367690 - 1367666 - T 100 -14.5 -5.63103 | opp_overlap 1367666 TTGTAATTAAAAAAA TGACTATGAGA ATT TCTCATAGTCA TTTTTTATTTAAGAA TERM 1916 1367666 - 1367690 + T 100 -14.5 -5.63517 | opp_overlap 1367666 TTGTAATTAAAAAAA TGACTATGAGA ATT TCTCATAGTCA TTTTTTATTTAAGAA CPE1168 1368027 - 1367695 - | hypothetical protein TERM 1917 1368387 - 1368413 + G 70 -8.8 -2.57501 | opp_overlap 1368390, overlap 1368391 TTGTAATATTCTTAT TAAGTGGAGCTG GAT CAGATCCATTTA CTGTATTTACTCAAG TERM 1918 1368391 - 1368409 + G 74 -7.4 -3.97911 | opp_overlap 1368390, overlap 1368387 AATATTCTTATTAAG TGGAGCTG GAT CAGATCCA TTTACTGTATTTACT TERM 1919 1368533 - 1368521 - g 76 -6.3 -4.61199 | ATTGCAGATAGAAAA CAACT TAA AGTTG GAACTTTTGTACTTG CPE1169 1368302 - 1368946 + | hypothetical protein TERM 1920 1368977 - 1368952 - T 77 -9.1 -3.38812 | opp_overlap 1368957, overlap 1368957 TGCTGCTTAATAATA GAAAACAGTCC ATAT GGACTGTTTTT TTTATATTTCTTGAT TERM 1921 1368957 - 1368972 + T 100 -9 -6.15717 | opp_overlap 1368952 1368957 CTTAATAATAGAAAA CAGTCC ATAT GGACTG TTTTTTTTATATTTC TERM 1922 1368972 - 1368957 - T 93 -9 -4.79752 | opp_overlap 1368957, overlap 1368952 CTTAATAATAGAAAA CAGTCC ATAT GGACTG TTTTTTTTATATTTC CPE1170 1369197 - 1368979 - | hypothetical protein TERM 1923 1369233 - 1369262 + r 93 -10.9 -3.31726 | opp_overlap 1369233 1369239, overlap 1369239 ATTATAACAATAAAA GAAAAACATGCCA ATAT TGGCATGTTTTTA TATTGTATCAAAAAA TERM 1924 1369262 - 1369233 - R 100 -10.9 -4.9645 | opp_overlap 1369233 1369239, overlap 1369239 ATTATAACAATAAAA GAAAAACATGCCA ATAT TGGCATGTTTTTA TATTGTATCAAAAAA TERM 1925 1369239 - 1369256 + r 100 -9.9 -5.1764 | opp_overlap 1369233 1369239, overlap 1369233 ACAATAAAAGAAAAA CATGCCA ATAT TGGCATG TTTTTATATTGTATC TERM 1926 1369256 - 1369239 - R 100 -9.9 -5.64321 | opp_overlap 1369239 1369233, overlap 1369233 ACAATAAAAGAAAAA CATGCCA ATAT TGGCATG TTTTTATATTGTATC CPE1171 1369643 - 1369260 - | hypothetical protein CPE1172 1370710 - 1369976 - | haloacid dehalogenase, IB family protein CPE1173 1370990 - 1371418 + | hypothetical protein exoA 1372246 - 1371494 - | exodeoxyribonuclease III TERM 1927 1372375 - 1372356 - H 91 -5.2 -6.09888 | opp_overlap 1372356 1372368, overlap 1372368 TTGTAATAAAAAAAA TTAAATAA ATCA TTATTTAA TTTTAAATAATTGTA CPE1175 1372431 - 1372658 + | hypothetical protein TERM 1928 1372912 - 1372964 + T 93 -10.2 -3.91597 | opp_overlap 1372914 1372918, overlap 1372913 1372918 1372926 ATATTTATAAAATGA AATAAATCAACAAAGAGCATCAAT ATTTA AATGATGTTCTTTGTTGATTTAAA TTTACTCTATATAAT TERM 1929 1372913 - 1372963 + T 100 -13.7 -2.94235 | opp_overlap 1372914 1372918, overlap 1372912 1372918 1372926 TATTTATAAAATGAA ATAAATCAACAAAGAGCATCAAT ATTTA AATGATGTTCTTTGTTGATTTAA ATTTACTCTATATAA TERM 1930 1372962 - 1372914 - T 100 -15 -4.27483 | opp_overlap 1372913 1372912 1372918 1372926, overlap 1372918 ATTTATAAAATGAAA TAAATCAACAAAGAGCATCAAT ATTTA AATGATGTTCTTTGTTGATTTA AATTTACTCTATATA TERM 1931 1372918 - 1372958 + T 100 -13.6 -3.8822 | opp_overlap 1372918 1372914, overlap 1372913 1372912 1372926 ATAAAATGAAATAAA TCAACAAAGAGCATCAAT ATTTA AATGATGTTCTTTGTTGA TTTAAATTTACTCTA TERM 1932 1372958 - 1372918 - T 100 -11.4 -4.69048 | opp_overlap 1372913 1372912 1372918 1372926, overlap 1372914 ATAAAATGAAATAAA TCAACAAAGAGCATCAAT ATTTA AATGATGTTCTTTGTTGA TTTAAATTTACTCTA CPE1176 1373388 - 1372966 - | hypothetical protein TERM 1933 1373671 - 1373690 + r 79 -5 -5.49809 | opp_overlap 1373671 TTCTAAAATAAAAAA CTCTAGCT TTAT AACTAGAG TTTTTTTAAAATTTA TERM 1934 1373690 - 1373671 - R 93 -7.2 -5.79595 | opp_overlap 1373671 TTCTAAAATAAAAAA CTCTAGCT TTAT AACTAGAG TTTTTTTAAAATTTA pyrE 1374289 - 1373711 - | orotate phosphoribosyltransferase pyrD 1375339 - 1374440 - | dihydroorotate dehydrogenase 1B TERM 1935 1374607 - 1374648 + g 72 -6.1 -4.24294 | gap 1 CTATGGCATCTTCTG CTGTAGAAATTCCGCCTAAT CCT ATTAC-TGGAATGTCTACAG TTTTAGCTACTTCAT pyrZ 1376099 - 1375359 - | dihydroorotate dehydrogenase electron transfer subunit pyrF 1376987 - 1376124 - | orotidine 5'-phosphate decarboxylase pyrC 1378196 - 1376997 - | dihydroorotase, multifunctional complex type CPE1182 1378376 - 1378218 - | hypothetical protein pyrB 1379304 - 1378381 - | aspartate carbamoyltransferase catalytic subunit TERM 1936 1379010 - 1379020 + g 72 -6.8 -4.09285 | opp_overlap 1379009 1379010 TCATTGCTATAAGAT CTGC ATA GCAG TTTACTGTTTTAATA TERM 1937 1379397 - 1379376 - R 100 -8.8 -5.52986 | opp_overlap 1379376 ATTTTATTAAAAAAA GTCTTCCT AAGATA AGGAAGAC TTTTCACGTATAAAT TERM 1938 1379376 - 1379397 + r 82 -8.8 -4.1721 | opp_overlap 1379376 ATTTTATTAAAAAAA GTCTTCCT AAGATA AGGAAGAC TTTTCACGTATAAAT TERM 1939 1379639 - 1379618 - R 70 -7.5 -3.44622 | opp_overlap 1379611 1379617 1379623, overlap 1379623 CATTTTGAGAATTAA TTAAATTCT TATA AGAATTTAA ATCTTAGAATAATTA CPE1184 1380495 - 1379716 - | beta-lactamase TERM 1940 1380720 - 1380683 - R 81 -7.2 -4.82128 | opp_overlap 1380688, overlap 1380688 TTACTAAACAGAAAA GAAAACACTCATCAAA TTAAAG TATGATGAGTGTTTTT ATATTATTAATCAGC TERM 1941 1380715 - 1380688 - R 90 -7.1 -5.2894 | opp_overlap 1380688, overlap 1380683 AAACAGAAAAGAAAA CACTCATCAAA TTAAAG TATGATGAGTG TTTTTATATTATTAA TERM 1942 1380688 - 1380715 + r 93 -7.8 -5.2015 | opp_overlap 1380683 1380688 AAACAGAAAAGAAAA CACTCATCAAAT TAAA GTATGATGAGTG TTTTTATATTATTAA pfk 1381827 - 1380727 - | 6-phosphofructokinase TERM 1943 1382008 - 1382029 + r 100 -8.8 -5.4833 | opp_overlap 1382008 CCTTCGATAAAAAAA GACAAGGA ATTTTA TCCTTGTC TTTTTTGTTAACTAA TERM 1944 1382029 - 1382008 - R 100 -8.8 -5.60993 | opp_overlap 1382008 CCTTCGATAAAAAAA GACAAGGA ATTTTA TCCTTGTC TTTTTTGTTAACTAA uppP 1382951 - 1382037 - | undecaprenyl pyrophosphate phosphatase manA 1384188 - 1383211 - | mannose-6-phosphate isomerase, class I CPE1188 1384439 - 1385794 + | UDP-N-acetylmuramyl tripeptide synthetase cobQ 1385812 - 1386543 + | glutamine amidotransferase, CobB/CobQ family CPE1190 1388070 - 1386523 - | hypothetical protein TERM 1945 1386571 - 1386556 - G 83 -7.6 -4.58283 | opp_overlap 1386556 TAATTTTTTTAAAAA CAGAGA TTCT TCTCTG TTTTTTCTATTTTTC TERM 1946 1386556 - 1386571 + g 100 -7.6 -5.69068 | opp_overlap 1386556 TAATTTTTTTAAAAA CAGAGA TTCT TCTCTG TTTTTTCTATTTTTC TERM 1947 1386681 - 1386693 + g 72 -4.8 -4.95547 | CTGTATAATCTTTAT CCTG AATAA CAGG TTTTATTATTGTAAA TERM 1948 1388353 - 1388363 + H 70 -2.6 -5.626 | AATATGTTATATTAT TATT ATA AATA TTTTTTTGTGGGGTG TERM 1949 1388704 - 1388727 + G 71 -5.5 -4.4521 | TGTATCTATTATCCC TATAACAAT TTCTTC ATTGTTATA TTCTTTTTCCATAAT CPE1191 1388384 - 1388962 + | hypothetical protein TERM 1950 1388992 - 1388970 - T 100 -12.1 -5.55769 | opp_overlap 1388970 CTGCATAATAAAAAA GGCTTAGCT TTAAT AGCTAAGCC TTTTTATTTTATTGG TERM 1951 1388970 - 1388992 + T 100 -12.1 -5.62288 | opp_overlap 1388970 CTGCATAATAAAAAA GGCTTAGCT TTAAT AGCTAAGCC TTTTTATTTTATTGG CPE1192 1390432 - 1388996 - | two-component sensor histidine kinase CPE1193 1391096 - 1390419 - | two-component response regulator TERM 1952 1391332 - 1391284 - R 78 -8.6 -3.94936 | gap 1, opp_overlap 1391286 1391287 1391290, overlap 1391286 1391287 1391290 AATTAAGATATTAAA GAT-TAAGGTCTCAAATAAAAAA ACAA TTCCTTATTTGAGACCTTATATT TATTAGTTATTTAAT TERM 1953 1391286 - 1391330 + r 75 -6.8 -4.42287 | gap 1, opp_overlap 1391286 1391284 1391287 1391290, overlap 1391287 1391290 TTAAGATATTAAAGA T-TAAGGTCTCAAATAAAAAA ACAA TTCCTTATTTGAGACCTTATA TTTATTAGTTATTTA TERM 1954 1391329 - 1391286 - R 95 -12.8 -3.55205 | opp_overlap 1391286 1391287 1391290, overlap 1391284 1391287 1391290 TTAAGATATTAAAGA TTAAGGTCTCAAATAAAAAA ACAA TTCCTTATTTGAGACCTTAT ATTTATTAGTTATTT TERM 1955 1391328 - 1391287 - R 100 -16.3 -2.724 | opp_overlap 1391287 1391286 1391290, overlap 1391286 1391284 1391290 TAAGATATTAAAGAT TAAGGTCTCAAATAAAAAA ACAA TTCCTTATTTGAGACCTTA TATTTATTAGTTATT TERM 1956 1391287 - 1391328 + r 95 -11.9 -3.78931 | opp_overlap 1391286 1391284 1391287 1391290, overlap 1391286 1391290 TAAGATATTAAAGAT TAAGGTCTCAAATAAAAAA ACAA TTCCTTATTTGAGACCTTA TATTTATTAGTTATT TERM 1957 1391325 - 1391290 - R 100 -13.6 -3.4934 | opp_overlap 1391290 1391287 1391286, overlap 1391287 1391286 1391284 GATATTAAAGATTAA GGTCTCAAATAAAAAA ACAA TTCCTTATTTGAGACC TTATATTTATTAGTT TERM 1958 1391290 - 1391325 + r 86 -9.2 -3.99352 | opp_overlap 1391287 1391286 1391284 1391290, overlap 1391287 1391286 GATATTAAAGATTAA GGTCTCAAATAAAAAA ACAA TTCCTTATTTGAGACC TTATATTTATTAGTT CPE1194 1392597 - 1391335 - | hypothetical protein TERM 1959 1391622 - 1391633 + g 70 -4.4 -4.93547 | CTCTTCCTATGTACT CTTC AACA GAAG TTTTTAATTCCTTAA CPE1195 1395620 - 1392606 - | hypothetical protein TERM 1960 1395809 - 1395779 - R 100 -9.9 -4.90455 | opp_overlap 1395778 1395779 ATATATGCATAAAAA GTGGTTATTAAGC AAAAA ACTCAATAACCAC CTTTCTTATATTTAA CPE1196 1397813 - 1395825 - | hypothetical protein CPE1197 1400357 - 1398012 - | helicase protein TERM 1961 1400446 - 1400420 - R 84 -5.2 -5.74684 | opp_overlap 1400420 1400422 TAATAAAAATAAAAA GCCTAGAAAGAT TAA ATTTCTCTAGAC TTTTTGTTTTTATTA TERM 1962 1400420 - 1400446 + r 73 -3 -5.74684 | opp_overlap 1400420, overlap 1400422 TAATAAAAATAAAAA GCCTAGAAAGAT TAA ATTTCTCTAGAC TTTTTGTTTTTATTA CPE1198 1400833 - 1400459 - | hypothetical protein CPE1199 1401852 - 1400875 - | hypothetical protein TERM 1963 1401108 - 1401156 + g 93 -5.5 -5.97979 | opp_overlap 1401101 1401100 1401108 1401116, overlap 1401109 1401151 TTATAAATGGAGATA CTCCTAAAGCCATTATTGAAAAT AAT ATTTTTAATTTTGGCTTTAAGAA TTTTTTTCTTATTCT TERM 1964 1401109 - 1401155 + g 83 -9 -4.15127 | opp_overlap 1401101 1401100 1401108 1401116, overlap 1401108 1401151 TATAAATGGAGATAC TCCTAAAGCCATTATTGAAAAT AAT ATTTTTAATTTTGGCTTTAAGA ATTTTTTTCTTATTC CPE1200 1403120 - 1402014 - | hypothetical protein CPE1201 1404039 - 1403122 - | hypothetical protein TERM 1965 1405438 - 1405428 - g 84 -6.8 -5.29782 | CATACTCAGAAAAAA GCCA AAC TGGC GATCCTACTGAAATA TERM 1966 1405602 - 1405616 + G 71 -8.6 -2.78344 | overlap 1405601 AAGCTCGTGTATTTA CTAAGG GTG CCTTAG ATTCTATACTTTCAA TERM 1967 1405910 - 1405890 - g 100 -12.7 -3.6279 | opp_overlap 1405881 AAAGTGCTGGAATAA CTCCAGTTA TGA TAACTGGAG ACCATAAAAATACAG CPE1202 1404296 - 1406902 + | calcium-transporting ATPase TERM 1968 1406913 - 1406940 + T 100 -8.6 -5.47964 | opp_overlap 1406913 AGTAAAAATAAAAAA GTAAGGTATC ACACTATA GATACCTTAC TTTTTATTATTTTAT TERM 1969 1406940 - 1406913 - T 100 -8.6 -5.95286 | opp_overlap 1406913 AGTAAAAATAAAAAA GTAAGGTATC ACACTATA GATACCTTAC TTTTTATTATTTTAT spoVB 1408563 - 1406947 - | stage V sporulation protein B CPE1204 1409559 - 1408585 - | ribosomal large subunit pseudouridine synthase C CPE1205 1410814 - 1409630 - | amidohydrolase family protein TERM 1970 1410838 - 1410864 + r 73 -5.4 -4.82548 | opp_overlap 1410842 1410845 CCTACTTTTCATTTA TAAATAATATAT TAT ATATACTATTTA TTTTATATATTTTTG pcrA 1413014 - 1411020 - | ATP-dependent helicase CPE1207 1413167 - 1414639 + | nicotinate phosphoribosyltransferase TERM 1971 1414655 - 1414696 + T 100 -12.5 -3.95986 | opp_overlap 1414642 1414659, overlap 1414659 1414662 CACTTATATTTTTAA AAAATAAGAGACGCTTCAT TAAT GTGAAGCGTCTCTTATTAA TTTACTTGACTTAAA TERM 1972 1414659 - 1414692 + T 100 -17.7 -3.6187 | opp_overlap 1414642 1414659, overlap 1414655 1414662 TATATTTTTAAAAAA TAAGAGACGCTTCAT TAAT GTGAAGCGTCTCTTA TTAATTTACTTGACT TERM 1973 1414692 - 1414659 - T 100 -17 -5.04385 | opp_overlap 1414655 1414659 1414662, overlap 1414642 TATATTTTTAAAAAA TAAGAGACGCTTCA TTAATG TGAAGCGTCTCTTA TTAATTTACTTGACT TERM 1974 1414662 - 1414689 + T 100 -15 -3.93148 | opp_overlap 1414659, overlap 1414659 1414655 ATTTTTAAAAAATAA GAGACGCTTCAT TAAT GTGAAGCGTCTC TTATTAATTTACTTG CPE1208 1414869 - 1414693 - | hypothetical protein CPE1209 1415234 - 1414899 - | hypothetical protein TERM 1975 1415156 - 1415168 + g 76 -3.5 -5.46129 | overlap 1415146 CTTTTTTTAAGAAGC TTAAA TCT TTTAA TTTTTTAGTTTCTTG TERM 1976 1415618 - 1415601 - H 100 -8.5 -6.02914 | opp_overlap 1415604, overlap 1415607 TTTATATAAAAAAAA GAACAGT AAAA ACTGTTC TTAAAGGAAAATGAA CPE1210 1415853 - 1416272 + | FUR family transcriptional regulator TERM 1977 1416305 - 1416267 - T 90 -12 -2.95598 | opp_overlap 1416277, overlap 1416277 TGTCAAAATAAACAT GAATAAAAAAGAGTGGTA ATT TACCACTCTTTTTTATAT TTAAATATTAATTTT TERM 1978 1416295 - 1416277 - T 100 -11.8 -5.54885 | opp_overlap 1416277, overlap 1416267 AACATGAATAAAAAA GAGTGGTA ATT TACCACTC TTTTTTATATTTAAA TERM 1979 1416277 - 1416295 + T 100 -11.8 -5.56264 | opp_overlap 1416277 1416267 AACATGAATAAAAAA GAGTGGTA ATT TACCACTC TTTTTTATATTTAAA CPE1211 1417747 - 1416350 - | dipeptidase PepV TERM 1980 1417940 - 1417887 - R 78 -9.5 -2.94194 | gap 2, opp_overlap 1417901, overlap 1417866 1417901 TATAAACTTTACATA CTTAATAATAAAAATAGCAAGCCAT TTATAT ATGACTTGCTATTTTTATT--TAAG CAATTACTTCTTTTC TERM 1981 1417901 - 1417928 + r 90 -7.1 -5.27335 | opp_overlap 1417901 1417887 ACTTAATAATAAAAA TAGCAAGCCAT TTATAT ATGACTTGCTA TTTTTATTTAAGCAA TERM 1982 1417928 - 1417901 - R 100 -9.3 -5.30348 | opp_overlap 1417901, overlap 1417887 ACTTAATAATAAAAA TAGCAAGCCAT TTATAT ATGACTTGCTA TTTTTATTTAAGCAA uraA 1419246 - 1417936 - | uracil permease TERM 1983 1419112 - 1419128 + g 72 -8.1 -3.35679 | TGGATCTAAGCCTGT TACTAGT GGT ACTAGTA TTGTAGCTCCAAACA CPE1213 1419737 - 1419531 - | hypothetical protein CPE1214 1419942 - 1419709 - | hypothetical protein TERM 1984 1420114 - 1420084 - R 95 -8.4 -5.24796 | opp_overlap 1420084 TTTATATAATAAAAA CTCTGCCTTAAGTT ATA ATCTTAAAACAGAG TCATTATCTAAAATA CPE1215 1420595 - 1420122 - | ABC transporter CPE1216 1420877 - 1420728 - | hypothetical protein CPE1217 1421941 - 1420883 - | ABC transporter TERM 1985 1421972 - 1422015 + r 78 -8.5 -3.85947 | opp_overlap 1421971 1421964 1421976, overlap 1421969 1421976 CCTAAAATATATTAT TAAACTCTAAGAAACTA TTTTTAAACT TAGTTCCTTAGAGTTTA TATTTTACTTAATTT TERM 1986 1422011 - 1421976 - R 71 -7.1 -3.85082 | opp_overlap 1421976 1421972 1421969, overlap 1421971 1421964 AAATATATTATTAAA CTCTAAGAAACTA TTTTTAAACT TAGTTCCTTAGAG TTTATATTTTACTTA CPE1218 1423030 - 1422029 - | ABC transporter cbiJ 1423807 - 1423043 - | cobalt-precorrin-6x reductase cbiH 1424548 - 1423826 - | precorrin-3B C17-methyltransferase cbiG 1425701 - 1424703 - | cobalamin biosynthesis protein CbiG cbiF 1426459 - 1425704 - | precorrin-4 C11-methyltransferase cbiL 1427172 - 1426510 - | cobalt-precorrin-2 C(20)-methyltransferase TERM 1987 1426748 - 1426734 - G 71 -7.2 -3.78934 | CTGCTGGCAGAACAA GTAATG GTT CATTAC CTACAACTAATGTTC TERM 1988 1426973 - 1426987 + g 74 -8.6 -3.36341 | overlap 1426972 AATTCTCTGTTTTTC TTTCCC ATT GGGAAA TGTTTAACAGCTATT cbiT 1427765 - 1427172 - | precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit cbiE 1428396 - 1427785 - | precorrin-6y C5,15-methyltransferase (decarboxylating) cbiD 1429521 - 1428424 - | cobalt-precorrin-6A synthase cbiC 1430168 - 1429539 - | precorrin-8X methylmutase cbiK 1431010 - 1430168 - | CbiK protein TERM 1989 1431065 - 1431040 - H 100 -10.5 -5.63236 | opp_overlap 1431043 ATTTAAAAATAAAAA GCATCTGTGCT ACAA AGAACAGATGC TTACAAATCAAAGTA TERM 1990 1431888 - 1431874 - g 80 -8.6 -3.76186 | opp_overlap 1431873 1431879 TATGTATAAAAGTAA GGATTC TAT GAATCC CGTAGTTTTCTTGCT CPE1229 1431530 - 1432762 + | hypothetical protein TERM 1991 1432766 - 1432786 + T 100 -8.4 -5.4593 | opp_overlap 1432766 GGTGAATGGTAAAAA GATAAGAC TTTTC GTCTTATC TTTTTCTTATTTTAC TERM 1992 1432786 - 1432766 - T 85 -8.4 -4.66833 | opp_overlap 1432766 GGTGAATGGTAAAAA GATAAGAC TTTTC GTCTTATC TTTTTCTTATTTTAC CPE1230 1433090 - 1432782 - | hypothetical protein TERM 1993 1433327 - 1433307 - R 100 -9.8 -5.94597 | opp_overlap 1433307 TAATAGCAAAAAAAA TAGGAGTC AACTG GACTCCTA TTTTAATTAAACTGT TERM 1994 1433307 - 1433327 + r 100 -9.8 -4.42639 | opp_overlap 1433307 TAATAGCAAAAAAAA TAGGAGTC AACTG GACTCCTA TTTTAATTAAACTGT CPE1231 1436747 - 1433358 - | surface protein TERM 1995 1437063 - 1437027 - R 100 -11.2 -6.09888 | opp_overlap 1437026 TTGTAATAAAAAAAA TACACGTCATATAAAT TTAAT ATTTACATAACGTGTA CTCATTTATTAAAAC CPE1232 1438122 - 1437121 - | hypothetical protein CPE1233 1438854 - 1438156 - | hypothetical protein TERM 1996 1439047 - 1439065 + r 70 -4.6 -5.03145 | opp_overlap 1439045 1439047, overlap 1439049 TATTTTATTACAACA TTTGAGAA TAA TTCTCATA TTTTTTCCCAAATTA TERM 1997 1439049 - 1439063 + r 73 -7.2 -4.13963 | opp_overlap 1439047 1439045, overlap 1439047 TTTTATTACAACATT TGAGAA TAA TTCTCA TATTTTTTCCCAAAT TERM 1998 1439233 - 1439211 - R 70 -3.6 -5.24129 | TCTCTTTATAAAAAA TATTTCTTTC TAC AAAAAAAATA TTCCACTAAATATAT TERM 1999 1439312 - 1439355 + r 73 -6.5 -4.26463 | gap 3, opp_overlap 1439317 1439321, overlap 1439315 1439317 1439320 1439321 TTATATTATATGTAA TT-TAATA-AAG-TGCACCTCA AAA TGAGGTGCACCTTATATTATAA TTTGTATTACTATCT TERM 2000 1439315 - 1439349 + r 95 -13 -3.68709 | opp_overlap 1439317 1439321, overlap 1439312 1439317 1439320 1439321 TATTATATGTAATTT AATAAAGTGCACCTCA AAA TGAGGTGCACCTTATA TTATAATTTGTATTA TERM 2001 1439347 - 1439317 - R 100 -17.8 -3.20164 | opp_overlap 1439315 1439312 1439317 1439320 1439321, overlap 1439321 TTATATGTAATTTAA TAAAGTGCACCTCA AAA TGAGGTGCACCTTA TATTATAATTTGTAT TERM 2002 1439317 - 1439347 + r 100 -15.6 -3.405 | opp_overlap 1439317 1439321, overlap 1439315 1439312 1439320 1439321 TTATATGTAATTTAA TAAAGTGCACCTCA AAA TGAGGTGCACCTTA TATTATAATTTGTAT TERM 2003 1439320 - 1439344 + r 95 -12.9 -3.81602 | opp_overlap 1439317 1439321, overlap 1439317 1439315 1439312 1439321 TATGTAATTTAATAA AGTGCACCTCA AAA TGAGGTGCACC TTATATTATAATTTG TERM 2004 1439343 - 1439321 - R 100 -16.4 -4.25681 | opp_overlap 1439320 1439317 1439315 1439312 1439321, overlap 1439317 ATGTAATTTAATAAA GTGCACCTCA AAA TGAGGTGCAC CTTATATTATAATTT TERM 2005 1439321 - 1439343 + r 100 -16.4 -2.87876 | opp_overlap 1439321 1439317, overlap 1439320 1439317 1439315 1439312 ATGTAATTTAATAAA GTGCACCTCA AAA TGAGGTGCAC CTTATATTATAATTT nagJ 1442370 - 1439365 - | hyaluronidase TERM 2006 1442445 - 1442470 + r 77 -4.7 -5.30348 | opp_overlap 1442445 AAATAGTTAAAAAAA TTGGAAGGATA ATTT TTTCCTCCCAA TTTTTATTATTACCT TERM 2007 1442470 - 1442445 - R 88 -6.9 -5.54264 | opp_overlap 1442445 AAATAGTTAAAAAAA TTGGAAGGATA ATTT TTTCCTCCCAA TTTTTATTATTACCT CPE1235 1443551 - 1442598 - | hypothetical protein TERM 2008 1443695 - 1443744 + r 80 -8.1 -4.20027 | opp_overlap 1443697, overlap 1443697 ATATAATATTTTAAA AAGCGTGTATTAAAGTAAATTTT ATTT AAAAACCACTTTAATACACGCTC TTTCTATGATTTATT TERM 2009 1443697 - 1443742 + r 91 -10.7 -3.67724 | opp_overlap 1443697, overlap 1443695 ATAATATTTTAAAAA GCGTGTATTAAAGTAAATTTT ATTT AAAAACCACTTTAATACACGC TCTTTCTATGATTTA TERM 2010 1443742 - 1443697 - R 100 -15.1 -4.67556 | opp_overlap 1443697 1443695 ATAATATTTTAAAAA GCGTGTATTAAAGTAAATTTT ATTT AAAAACCACTTTAATACACGC TCTTTCTATGATTTA sod 1444466 - 1443783 - | Mn/Fe superoxide dismutase TERM 2011 1444385 - 1444369 - G 77 -8.1 -3.83154 | opp_overlap 1444365 TAAGGATAATCTAAA GGTTTTA ATT TAAAACC TTCCCCTTTAGTTGA CPE1237 1445139 - 1444528 - | hypothetical protein CPE1238 1445449 - 1446897 + | multidrug resistance protein TERM 2012 1446958 - 1446903 - T 100 -10.1 -5.08731 | gap 1, opp_overlap 1446908, overlap 1446908 TAACAAATAACAAAA TAAAAGGTGCTGTATCAAAG-ATTTT ATTAA AATCTACTTTGATACAGCACCTTTTT AATTATTACTTTCTT TERM 2013 1446908 - 1446953 + T 100 -10 -5.00339 | gap 1, opp_overlap 1446903 1446908 AATAACAAAATAAAA GGTGCTGTATCAAAG-ATTTT ATTAA AATCTACTTTGATACAGCACC TTTTTAATTATTACT TERM 2014 1446953 - 1446908 - T 100 -10 -5.33124 | gap 1, opp_overlap 1446908, overlap 1446903 AATAACAAAATAAAA GGTGCTGTATCAAAG-ATTTT ATTAA AATCTACTTTGATACAGCACC TTTTTAATTATTACT CPE1239 1447121 - 1446957 - | hypothetical protein CPE1240 1448489 - 1447152 - | magnesium transporter TERM 2015 1448437 - 1448457 + g 72 -7 -4.03751 | overlap 1448446 TCAAATTTATTACTT GGATATTT AGCTA AAATATCC TTTAGCTTTTCTTTT TERM 2016 1448446 - 1448463 + g 75 -4.2 -5.33124 | overlap 1448437 TTACTTGGATATTTA GCTAAA ATATCC TTTAGC TTTTCTTTTGTTATT TERM 2017 1448933 - 1448968 + r 95 -10.7 -4.3129 | opp_overlap 1448933 1448939, overlap 1448939 TAACTACATGCAAAA TAAAAAGCAGATTAG TTTTTT CTAATCTGCTTTTCA TTTTAATCCTAACTC TERM 2018 1448968 - 1448933 - R 100 -12.9 -4.26019 | opp_overlap 1448933 1448939, overlap 1448939 TAACTACATGCAAAA TAAAAAGCAGATTAG TTTTTT CTAATCTGCTTTTCA TTTTAATCCTAACTC TERM 2019 1448962 - 1448939 - R 100 -9.7 -5.48213 | opp_overlap 1448939 1448933, overlap 1448933 CATGCAAAATAAAAA GCAGATTAG TTTTTT CTAATCTGC TTTTCATTTTAATCC TERM 2020 1448939 - 1448962 + r 93 -9.7 -4.70319 | opp_overlap 1448933 1448939, overlap 1448933 CATGCAAAATAAAAA GCAGATTAG TTTTTT CTAATCTGC TTTTCATTTTAATCC CPE1241 1449803 - 1449030 - | hypothetical protein cspL 1450066 - 1450275 + | cold shock protein TERM 2021 1450330 - 1450376 + T 81 -7 -4.89393 | gap 2, opp_overlap 1450330 AAATGTTTTAATAAA TATTCCGAGTAAATTCACAATA TAATT TATGGTGA-TT-ACTCGGAATA TTTTTATAGGGTTTA TERM 2022 1450376 - 1450330 - T 73 -7 -4.17132 | gap 2, opp_overlap 1450330 AAATGTTTTAATAAA TATTCCGAGTAAATTCACAATA TAATT TATGGTGA-TT-ACTCGGAATA TTTTTATAGGGTTTA CPE1243 1450634 - 1450428 - | hypothetical protein CPE1244 1451151 - 1450681 - | hypothetical protein CPE1245 1452240 - 1451269 - | hypothetical protein TERM 2023 1452076 - 1452087 + g 72 -4.4 -5.11937 | opp_overlap 1452076 TATAATCTCATCATA GCTT CCAT AAGC TTTTTTAACATTATT CPE1246 1452414 - 1452662 + | hypothetical protein TERM 2024 1452729 - 1452675 - T 100 -17 -4.03167 | opp_overlap 1452687 1452694, overlap 1452672 1452688 1452694 TAACATTAACAATAA TTTTAATATAAAATTAAAAGGACCTA AAA TTGGTCCTTTTAAATCTATATTAAAA TACAACTTTTTATTT TERM 2025 1452687 - 1452717 + T 71 -8.4 -3.10245 | opp_overlap 1452672 1452675 1452688 1452694, overlap 1452694 TAATTTTAATATAAA ATTAAAAGGACCTA AAA TTGGTCCTTTTAAA TCTATATTAAAATAC TERM 2026 1452716 - 1452688 - T 100 -11.9 -4.6821 | opp_overlap 1452687 1452694, overlap 1452672 1452675 1452694 AATTTTAATATAAAA TTAAAAGGACCTA AAA TTGGTCCTTTTAA ATCTATATTAAAATA TERM 2027 1452694 - 1452710 + T 73 -6.5 -4.27861 | opp_overlap 1452688 1452675 1452694, overlap 1452687 AATATAAAATTAAAA GGACCTA AAA TTGGTCC TTTTAAATCTATATT TERM 2028 1452710 - 1452694 - T 78 -6.5 -4.76874 | opp_overlap 1452694 1452687, overlap 1452688 1452675 AATATAAAATTAAAA GGACCTA AAA TTGGTCC TTTTAAATCTATATT CPE1247 1455294 - 1452739 - | hypothetical protein TERM 2029 1453556 - 1453573 + g 73 -5.7 -4.62203 | TACTCACAAAACTTT TCTATTT CCCT AAATAGA TTTTCATTATTTCCA TERM 2030 1453626 - 1453611 - G 72 -2.6 -5.45802 | TTCCCAAAACAAAAA GCTTAT CTCC ATAAAC TTCATATTGAATGAA TERM 2031 1455724 - 1455749 + r 72 -9.1 -2.56046 | opp_overlap 1455723 GATTATTCAAATGAC TCCAATGTAAC TAAA GTTCCATTGGA TAAGTTCAAGTTTCC CPE1248 1456806 - 1455868 - | hypothetical protein TERM 2032 1456916 - 1456879 - R 100 -13.1 -4.49716 | opp_overlap 1456880 1456885, overlap 1456872 1456880 1456885 AAATAAAATTCAAAA TTAAAAGCGATTTAAAA AAAT TTTTAAATCGCTTTTAT TAATATAAGATTGTA TERM 2033 1456915 - 1456880 - R 100 -16.6 -3.27389 | opp_overlap 1456880 1456885, overlap 1456879 1456872 1456885 AATAAAATTCAAAAT TAAAAGCGATTTAAAA AAAT TTTTAAATCGCTTTTA TTAATATAAGATTGT TERM 2034 1456880 - 1456915 + r 100 -16.6 -3.28261 | opp_overlap 1456880 1456879 1456872 1456885, overlap 1456885 AATAAAATTCAAAAT TAAAAGCGATTTAAAA AAAT TTTTAAATCGCTTTTA TTAATATAAGATTGT TERM 2035 1456910 - 1456885 - R 100 -12.1 -4.69549 | opp_overlap 1456885 1456880, overlap 1456880 1456879 1456872 AATTCAAAATTAAAA GCGATTTAAAA AAAT TTTTAAATCGC TTTTATTAATATAAG TERM 2036 1456885 - 1456910 + r 100 -12.1 -4.75472 | opp_overlap 1456880 1456879 1456872 1456885, overlap 1456880 AATTCAAAATTAAAA GCGATTTAAAA AAAT TTTTAAATCGC TTTTATTAATATAAG CPE1249 1457436 - 1456945 - | hypothetical protein CPE1250 1458872 - 1457655 - | hypothetical protein TERM 2037 1458277 - 1458296 + g 70 -3.6 -5.04868 | opp_overlap 1458278, overlap 1458278 ACTAGGTCTAAATTA ATATCTTC CTTT GAAGATAA TTTTATTTCCTTTAA CPE1251 1459865 - 1458882 - | hypothetical protein TERM 2038 1460112 - 1460077 - R 93 -9.2 -4.57304 | opp_overlap 1460079, overlap 1460079 ATTTAATTAAAGAAA TAGCCCTATTTTAG TGCTTAAT CTAAAATAGGGCAA AAAAATAAGAGGCTT TERM 2039 1460110 - 1460079 - R 100 -11.8 -3.88884 | opp_overlap 1460079, overlap 1460077 TTAATTAAAGAAATA GCCCTATTTTAG TGCTTAAT CTAAAATAGGGC AAAAAAATAAGAGGC TERM 2040 1460128 - 1460118 - R 75 -4 -5.46629 | AATAGGGCAAAAAAA TAAG AGG CTTA TAAAAAGTTAATAAT CPE1252 1461106 - 1460384 - | hypothetical protein CPE1253 1461624 - 1461286 - | hypothetical protein gltB 1463057 - 1461651 - | putative oxidoreductase hydG 1463949 - 1463050 - | ferredoxin--NADP(+) reductase subunit alpha bdhB 1465266 - 1464100 - | NADPH-dependent butanol dehydrogenase TERM 2041 1465340 - 1465308 - R 100 -11.6 -5.24531 | opp_overlap 1465306 1465301 1465312, overlap 1465292 ATTTTTCACAAAAAA CAAAGTAGACTATA TAAAC TATAGTCTACTTTA CATTTTATTTATTAT TERM 2042 1465312 - 1465336 + r 93 -10.2 -4.02396 | opp_overlap 1465308, overlap 1465306 1465301 TTCACAAAAAACAAA GTAGACTATA TAAAC TATAGTCTAC TTTACATTTTATTTA TERM 2043 1465372 - 1465384 + r 70 -3.5 -5.43553 | ATTTAATTTTATTCC TAAAT TCT ATTTA TTTTCTTTTTTCCAT CPE1257 1466829 - 1465378 - | hypothetical protein TERM 2044 1467091 - 1467130 + H 95 -12.4 -3.70331 | opp_overlap 1467085, overlap 1467085 1467091 1467093 CTTAAATATTGCACG TAGGGGCATGTATTAAAA ATTA TTTTGATACATGCTCCTC TATTTTAAATAAATT TERM 2045 1467091 - 1467132 + H 80 -8.4 -4.22948 | gap 2, opp_overlap 1467085, overlap 1467085 1467091 1467093 1467131 CTTAAATATTGCACG TAG-GG-GCATGTATTAAAA ATTA TTTTGATACATGCTCCTCTA TTTTAAATAAATTTT TERM 2046 1467093 - 1467128 + H 100 -15 -3.42605 | opp_overlap 1467085, overlap 1467085 1467091 1467091 TAAATATTGCACGTA GGGGCATGTATTAAAA ATTA TTTTGATACATGCTCC TCTATTTTAAATAAA TERM 2047 1467679 - 1467661 - g 85 -7.4 -4.91657 | AAGGAAGAAAATAAA GCTCAGGT AAA AACTGAGC CTAAAGTTAAAGAGG entA 1467436 - 1470303 + | putative enterotoxin TERM 2048 1470431 - 1470400 - T 77 -6.7 -4.57073 | opp_overlap 1470385 1470400, overlap 1470387 1470385 TATGCTTTTTAAAAA GGCACATACTTAA TTTTTT TTAAGTATAGGCC TTTTTTCTCTCTAAA TERM 2049 1470400 - 1470431 + T 76 -4.5 -5.4251 | opp_overlap 1470387 1470385 1470400, overlap 1470385 TATGCTTTTTAAAAA GGCACATACTTAA TTTTTT TTAAGTATAGGCC TTTTTTCTCTCTAAA CPE1259 1471432 - 1470518 - | hypothetical protein TERM 2050 1471676 - 1471644 - R 93 -7.9 -5.18561 | opp_overlap 1471645 1471648, overlap 1471648 TAAATAGCTAAAAAA TTAAGAGATATAGAA AAT TTCTATATCTCTTGT ATTAAATCCCAAAAT TERM 2051 1471645 - 1471675 + r 95 -13.6 -3.08679 | opp_overlap 1471644 1471648, overlap 1471648 AAATAGCTAAAAAAT TAAGAGATATAGAA AAT TTCTATATCTCTTG TATTAAATCCCAAAA TERM 2052 1471672 - 1471648 - R 100 -13.1 -3.94773 | opp_overlap 1471648 1471645, overlap 1471644 TAGCTAAAAAATTAA GAGATATAGAA AAT TTCTATATCTC TTGTATTAAATCCCA TERM 2053 1471648 - 1471672 + r 100 -13.1 -3.68988 | opp_overlap 1471644 1471648, overlap 1471645 TAGCTAAAAAATTAA GAGATATAGAA AAT TTCTATATCTC TTGTATTAAATCCCA CPE1260 1472500 - 1471730 - | hypothetical protein TERM 2054 1471997 - 1472012 + g 72 -4 -5.09204 | ATCGCTATATGTCTT TGCTTT TTTC AAGGCA TTTTTATTCCAATCT TERM 2055 1472446 - 1472460 + g 79 -7.2 -4.41348 | ATTCAGGACAAGTTT TAGCAT TAG ATGCTA TTTCTTTAGAGCAAA CPE1261 1473373 - 1472753 - | hypothetical protein TERM 2056 1473622 - 1473588 - H 74 -8.6 -3.3164 | opp_overlap 1473593 AACTTACTTTCACAA GTTTGTGACGGACTTT CAA AAAGTCCGTCATACTC TAAAGCCTTGGTATG TERM 2057 1473593 - 1473617 + H 100 -15.9 -2.62933 | opp_overlap 1473588 ACTTTCACAAGTTTG TGACGGACTTT CAA AAAGTCCGTCA TACTCTAAAGCCTTG CPE1262 1473706 - 1473876 + | hypothetical protein greA 1474429 - 1474893 + | transcription elongation factor GreA CPE1264 1479968 - 1475202 - | sialidase-like protein TERM 2058 1477617 - 1477599 - G 75 -7.4 -4.16251 | opp_overlap 1477603, overlap 1477613 ATATAATTCCCAAAA TGCTGTTC CAC GAACTGCA TTAGCAAATAAGAAA TERM 2059 1479038 - 1479022 - G 81 -8.1 -4.26076 | TCAGTTCCATTAAAA TCATATG GCT CATATGA AATAGTAAGCTTTTT TERM 2060 1479663 - 1479678 + g 70 -4 -4.92791 | AGAATTAGCTTCTAC TTCTGG TAAA TCAGAA TTTTCTTGTATTGTA TERM 2061 1481616 - 1481628 + G 72 -7.7 -3.58329 | GGTCATGGGATGGTT GGGTT GAA AACCC TTTAGAAAATGTTTC CPE1265 1480226 - 1481989 + | hypothetical protein CPE1266 1486179 - 1482112 - | beta-galactosidase TERM 2062 1484272 - 1484284 + g 74 -7.7 -3.72695 | AAAGTAACTTGATTT TGGAG CTG CTCCA TTTCCTCCACCAACT TERM 2063 1485351 - 1485367 + g 70 -8.1 -3.07113 | CAATAGCAGTTTGCT TGAAAGT ATA ACTTTCA TTAACTCCAATACTC TERM 2064 1486382 - 1486362 - R 100 -9.1 -5.68023 | opp_overlap 1486362 TTATAACTAAAAAAA CACATTGAA AAA CTCAATGTG TTTTTATTTTATTAA TERM 2065 1486362 - 1486382 + r 100 -8.4 -5.62288 | opp_overlap 1486362 TTATAACTAAAAAAA CACATTGA AAAAC TCAATGTG TTTTTATTTTATTAA CPE1267 1487763 - 1486429 - | hypothetical protein TERM 2066 1486577 - 1486548 - G 80 -8.8 -3.75024 | TCTTACCATCAACAA CTACTAATTCTA CATTGC TAGAATTAGCAG AATATACTATTGTTG TERM 2067 1487836 - 1487803 - R 73 -5.4 -4.75356 | AAATATAGCTAAAAA TAAGAGGCTATATC TACTAC GATACATCCCCTTA CTTTCCTTTTATATT adeC 1489618 - 1487900 - | adenine deaminase CPE1269 1490680 - 1489634 - | spermidine/putrescine-binding protein 1 CPE1270 1491751 - 1490720 - | ABC transporter CPE1271 1492569 - 1491787 - | ABC transporter CPE1272 1492909 - 1492571 - | hypothetical protein CPE1273 1493399 - 1493064 - | hypothetical protein TERM 2068 1493651 - 1493688 + r 75 -8.8 -3.16556 | opp_overlap 1493651 ATATAAACACAAAAA GACAATAATCATAT ATATTTTTCA ATATGATTATTGTC TTAAATATGGTATTT TERM 2069 1493688 - 1493651 - R 100 -8.8 -5.26155 | opp_overlap 1493651 ATATAAACACAAAAA GACAATAATCATAT ATATTTTTCA ATATGATTATTGTC TTAAATATGGTATTT CPE1274 1494935 - 1493787 - | lysine-N-methylase TERM 2070 1495090 - 1495059 - R 79 -5.2 -5.55769 | opp_overlap 1495059, overlap 1495077 TCCTATAATAAAAAA TCTACCAGACAATA AAAC TAAAGTCTGATAGA TTTTAAAATAAATAT CPE1275 1496099 - 1495134 - | dihydrouridine synthase family protein CPE1276 1497573 - 1496203 - | hypothetical protein TERM 2071 1497779 - 1497748 - R 70 -4.6 -5.08015 | opp_overlap 1497753, overlap 1497751 AACTTAAAAAATAAA TATGCTTATAAGAA TGCT TTCTTATAATCTTA AAATATCTTCCCTAT TERM 2072 1497934 - 1497897 - R 100 -13.8 -4.67038 | opp_overlap 1497900 GTCCTAAAATTAAAA TAACCTACAAAAATCT ATAAAA AGACTTTTGTAGGTTA TAAGATAAAATCTAT TERM 2073 1497900 - 1497931 + r 77 -8.9 -3.33162 | opp_overlap 1497897 CTAAAATTAAAATAA CCTACAAAAATCT ATAAAA AGACTTTTGTAGG TTATAAGATAAAATC CPE1277 1498287 - 1497946 - | hypothetical protein CPE1278 1500215 - 1498299 - | oligopeptide transporter, OPT family TERM 2074 1500242 - 1500273 + r 78 -8.2 -3.89875 | opp_overlap 1500260 CTCCTTTCCTTTATT CATATCAAGGGATA AAAA TATCTATTGATATG TTCTATTGTTATATT TERM 2075 1500515 - 1500531 + r 74 -8.1 -3.39261 | opp_overlap 1500494 1500514 1500512 1500511, overlap 1500494 CTTATAATTAAGTAT TTCATTG TTT CAATGAA TTAATACTTTGTTTA TERM 2076 1500590 - 1500607 + r 70 -4.3 -4.94902 | TATATTTTCATGGTG TATTTTA CTAT TAAAATA TTTTTATCATGCTTA TERM 2077 1500823 - 1500784 - R 93 -12.4 -3.21096 | opp_overlap 1500790, overlap 1500790 TAAATAAAATTAAAC TAAAAAGCTGCATAGACC TATA AATCTATGCAGCTTCTCA TATAACTATTTTCTA TERM 2078 1500817 - 1500790 - R 100 -11.4 -5.05577 | opp_overlap 1500790, overlap 1500784 AAATTAAACTAAAAA GCTGCATAGACC TATA AATCTATGCAGC TTCTCATATAACTAT TERM 2079 1500790 - 1500817 + r 89 -10 -3.47841 | opp_overlap 1500784 1500790 AAATTAAACTAAAAA GCTGCATAGA CCTATAAA TCTATGCAGC TTCTCATATAACTAT nagK 1504352 - 1500861 - | hyaluronidase TERM 2080 1503943 - 1503963 + g 74 -7.7 -3.81929 | opp_overlap 1503932, overlap 1503932 ACTACATGGGCATCA TGATTTTCA AAA TGAGAATCA TTTGCTAAATTATTA TERM 2081 1504553 - 1504518 - R 70 -4.8 -4.82128 | opp_overlap 1504521, overlap 1504521 TCATTAAATATAAAA TAACCACACACC AGTTTAAGTAAA GGTGTGTGGTTT ATGATAAAAAACTCT TERM 2082 1504550 - 1504521 - R 75 -6.5 -4.49132 | opp_overlap 1504521, overlap 1504518 TTAAATATAAAATAA CCACACACC AGTTTAAGTAAA GGTGTGTGG TTTATGATAAAAAAC CPE1280 1504736 - 1504584 - | hypothetical protein TERM 2083 1504911 - 1504874 - R 100 -12.3 -5.33848 | opp_overlap 1504873 1504872, overlap 1504876 ATCATAAGCAAAAAA TATAGAGTAGAATCTAT TTCT ATAGACTCTACTCTAAA CATATATTTTATTAA TERM 2084 1504909 - 1504876 - R 100 -14.9 -4.29187 | opp_overlap 1504873 1504872, overlap 1504874 CATAAGCAAAAAATA TAGAGTAGAATCTAT TTCT ATAGACTCTACTCTA AACATATATTTTATT CPE1281 1510066 - 1505003 - | hypothetical protein TERM 2085 1509135 - 1509149 + g 76 -2.9 -5.61689 | ATATTTTGAGCAGCA TAATG TCTTC CATTA TTTTTTATTGATTTT TERM 2086 1510461 - 1510425 - R 87 -6 -5.72622 | opp_overlap 1510426 1510427 TTTATAAACAAAAAA CCTATAAGATAGTC TTTTATATT GACCACCCTATAGG CTCTTTAACACTTAG CPE1282 1511903 - 1510515 - | transmembrane protein TERM 2087 1511144 - 1511157 + g 72 -5.3 -4.81523 | opp_overlap 1511144 TTGTGAAAAACTTAA TGCTT ATAA AAGCA TTTTCATTTTTACTT TERM 2088 1511419 - 1511435 + g 72 -8.1 -3.33162 | GATATGTATCCTCCA GTAATTG TAC CAATTAC TTGTGAAATAGCATA TERM 2089 1511839 - 1511849 + g 87 -2.4 -6.20267 | opp_overlap 1511830 1511839 ATTAAAGCTAATACA GCTG GTA CCGC TTTTTTTATTTTTAC TERM 2090 1512648 - 1512635 - g 70 -3.9 -5.1287 | opp_overlap 1512635 GTCATACTGAAAAAA TTCAA GATA TTGAA TTTGTATTCCGCTTA CPE1283 1512322 - 1513071 + | transcriptional regulator TERM 2091 1513100 - 1513138 + T 100 -15 -3.04062 | opp_overlap 1513105, overlap 1513105 AAATATTTCTACATA AAAAACAGCAATAATATT TTA AATATTATTGCTGTTTTC ATTTCTCATTACATT TERM 2092 1513105 - 1513133 + T 100 -14.9 -4.64383 | opp_overlap 1513105, overlap 1513100 TTTCTACATAAAAAA CAGCAATAATATT TTA AATATTATTGCTG TTTTCATTTCTCATT TERM 2093 1513133 - 1513105 - T 100 -14.9 -5.36441 | opp_overlap 1513105 1513100 TTTCTACATAAAAAA CAGCAATAATATT TTA AATATTATTGCTG TTTTCATTTCTCATT CPE1284 1514370 - 1513189 - | pyrimidine nucleoside transporter TERM 2094 1514739 - 1514694 - R 86 -4.3 -5.94713 | opp_overlap 1514694, overlap 1514696 ATTTTACAAAAAAAA TATTCAACCTTAACTTA AACTTTAATTAA AAAGTTAAGGTTGAACA TATTAATAAACTCTA CPE1285 1515928 - 1514831 - | peptidase, S41 family CPE1286 1516256 - 1516708 + | hypothetical protein TERM 2095 1516763 - 1516726 - T 70 -4.4 -5.01497 | gap 1, opp_overlap 1516730, overlap 1516727 1516730 ACTATTAGATAAAAA TTAATGGCAAG-TACTA AAAAA TAATAACTTGCCATTAT CTAACTATACTATTA TERM 2096 1516762 - 1516727 - T 72 -7.9 -3.59814 | gap 1, opp_overlap 1516730, overlap 1516726 1516730 CTATTAGATAAAAAT TAATGGCAAG-TACTA AAAAA TAATAACTTGCCATTA TCTAACTATACTATT TERM 2097 1516999 - 1517009 + T 82 -2.6 -6.30182 | AGATTTAATACATTT TTAA ATA TTAA TTTTTTTTTCTATCG CPE1287 1519614 - 1516999 - | hypothetical protein TERM 2098 1517496 - 1517513 + g 80 -2.1 -5.70829 | CCACCCAATACTTAA TTGAATT TATA AATTTAA TTTTTTTATAGTCTT TERM 2099 1518901 - 1518889 - G 74 -9.1 -2.83012 | AATTTGATCATTATA CGACC ATG GGTCG AAGCTACTTATTATT TERM 2100 1519746 - 1519725 - R 87 -5.9 -5.75478 | opp_overlap 1519725 AATTATATAAAAAAA TCCCCAATA AAAA TATTGTGGA TTAATGTACTTATAT TERM 2101 1519878 - 1519892 + r 75 -5.8 -5.04325 | opp_overlap 1519878 TTAGAATAAATATAA CATAAA TTA TTTATG TTTTTATCATTTAAA TERM 2102 1520070 - 1520044 - R 70 -5.2 -4.78752 | opp_overlap 1520045, overlap 1520045 AGTATAAGTTAAAAA CGCAATACTTTT TGT ATAAGTATTGCT TTATGGTAATGTATC TERM 2103 1520069 - 1520045 - R 77 -8.7 -3.46167 | opp_overlap 1520045, overlap 1520044 GTATAAGTTAAAAAC GCAATACTTTT TGT ATAAGTATTGC TTTATGGTAATGTAT TERM 2104 1520045 - 1520069 + r 81 -8.7 -4.01184 | opp_overlap 1520045 1520044 GTATAAGTTAAAAAC GCAATACTTTT TGT ATAAGTATTGC TTTATGGTAATGTAT CPE1288 1521327 - 1520263 - | hypothetical protein TERM 2105 1521572 - 1521525 - R 100 -17.4 -3.10012 | opp_overlap 1521530, overlap 1521513 1521530 AAGTTTATTATGCAA TAAAACCAACCCACGAAAAT CCAATTAT ATTTTCGTGGGTTGGTTTGA TGGAGGAGAATCATG TERM 2106 1521567 - 1521530 - R 100 -17.3 -4.69053 | opp_overlap 1521530, overlap 1521525 TATTATGCAATAAAA CCAACCCACGAAAAT CCAATTAT ATTTTCGTGGGTTGG TTTGATGGAGGAGAA TERM 2107 1521530 - 1521567 + r 100 -17.3 -3.72576 | opp_overlap 1521530 1521525 TATTATGCAATAAAA CCAACCCACGAAAAT CCAATTAT ATTTTCGTGGGTTGG TTTGATGGAGGAGAA CPE1289 1523180 - 1521612 - | hypothetical protein TERM 2108 1523197 - 1523215 + r 70 -3.2 -5.37593 | GCATTTTTCCACCCT TAAATTGT AAT ACTATTTA TTTTTTAATTTAGAA CPE1290 1524911 - 1523220 - | hypothetical protein TERM 2109 1523258 - 1523275 + g 72 -8.5 -3.25881 | overlap 1523250 AACTTTTTGCTACTC CTTTAGC ACTT GCTAAAG TTGCATCTTTAATAT TERM 2110 1524169 - 1524182 + g 81 -3.9 -5.60864 | opp_overlap 1524169 TAAATATATATTATA TCTTT CATC AAAGA TTTTTTTACTATATC TERM 2111 1524458 - 1524470 + g 77 -4.9 -5.18726 | opp_overlap 1524447, overlap 1524447 GAAGTGTTTGAGATG TTGTT TCA AACAA TTTTTCTTCTCCACC TERM 2112 1525911 - 1525901 - R 73 -6.8 -4.3613 | opp_overlap 1525900 1525899 GTTAAAATAAAAATA GGCT CAC AGCC AGTTTTAGTAACAAA TERM 2113 1526037 - 1526007 - R 100 -10.6 -6.01369 | opp_overlap 1526007 TAAACAATAAAAAAA CCACAAAAATCAAA AAA TATGATTTTCGTGG TTTTTATGGTGGAGG TERM 2114 1526007 - 1526037 + r 88 -8.4 -4.91109 | opp_overlap 1526007 TAAACAATAAAAAAA CCACAAAAATCAAA AAA TATGATTTTCGTGG TTTTTATGGTGGAGG CPE1291 1526173 - 1525991 - | hypothetical protein xpt 1527308 - 1526730 - | xanthine phosphoribosyltransferase TERM 2115 1527653 - 1527663 + G 72 -4 -5.01497 | opp_overlap 1527653 AGTATTCAGCAAAAT TAGA TCC TCTA TTTTTCTATAATAAT CPE1293 1527481 - 1528470 + | tetratricopeptide repeat protein TERM 2116 1528586 - 1528540 - T 100 -9.2 -5.54192 | opp_overlap 1528540 1528564 ATCAATCTAAAAAAA CTCTTAAATCTTAAAAATTA CACCTAT TAATTTTTAAATTTTAAGAG TTAATATAAATTTAT CPE1294 1529425 - 1528817 - | hypothetical protein TERM 2117 1529886 - 1529831 - R 100 -8.1 -5.56264 | gap 1, opp_overlap 1529831 TTTAAATATAAAAAA GGTACTTAAAAGATAAAGTT-TTA AAATTAAAA TAATAACTTTTTCTTCTAAGTACC TTCTAGAAAAGAACC smpB 1530371 - 1529901 - | SsrA-binding protein rnr 1533218 - 1530963 - | ribonuclease R TERM 2118 1533440 - 1533418 - R 80 -8.5 -4.35874 | gap 1 CAATATAATTCAAAA GCCACCC-TA ATTA TATGGGTGGC CAAAAAATAACTATT secG 1533681 - 1533451 - | preprotein translocase subunit SecG TERM 2119 1533805 - 1533815 + r 75 -4 -5.58522 | opp_overlap 1533805 ACAATGCATATTATA TAGT TTG ACTA TTTTTCTTTTATATA CPE1298 1534433 - 1533885 - | hypothetical protein TERM 2120 1534461 - 1534473 + r 73 -5.5 -4.81851 | CTAATAATCTATTTT CTCCT CAA GGGAG TTTTTAACTTTAAAT TERM 2121 1534686 - 1534666 - R 72 -8.5 -3.26947 | TAATTTTCACAGTAA TTTTATTTG TAA CAAATAAAA AAACTCCGCCCTAAA TERM 2122 1534713 - 1534690 - R 100 -9.6 -6.08342 | opp_overlap 1534690 TAACAAATAAAAAAA CTCCGCCCTA AAAA TAGGACGAAG TTGAATCCGCGATAC TERM 2123 1534876 - 1534888 + r 70 -6.3 -4.33854 | ACCATTCCACTACTT TCTCT TAA AGAGA TTTCATTTTATTCCT TERM 2124 1535636 - 1535655 + r 83 -6.4 -5.14985 | opp_overlap 1535636 TGTCAAAATAAAAAA CCCCTAAG AAAA CTTAGAGG TTTTTATCTATTTAA TERM 2125 1535655 - 1535636 - R 100 -8.6 -5.79595 | opp_overlap 1535636 TGTCAAAATAAAAAA CCCCTAAG AAAA CTTAGAGG TTTTTATCTATTTAA eno 1536991 - 1535696 - | phosphopyruvate hydratase TERM 2126 1535806 - 1535817 + g 81 -5.8 -5.28942 | CTCTTTCACTTCTAG CTGG AGCA CCAG TTTTTATTTGACCTG TERM 2127 1536695 - 1536705 + g 70 -5.4 -4.64844 | opp_overlap 1536695 GTTAGTTCCATCTAA CTCT ATA AGAG TTTTATCTATGTAAG TERM 2128 1537327 - 1537345 + r 72 -6 -4.42667 | opp_overlap 1537327 TCCTTAAAAGAAAAA TGAGCTAT TTA AAAGCTCA TTTTCATAATTTTAA TERM 2129 1537345 - 1537327 - R 85 -6 -5.45802 | opp_overlap 1537327 TCCTTAAAAGAAAAA TGAGCTAT TTA AAAGCTCA TTTTCATAATTTTAA TERM 2130 1537440 - 1537452 + r 75 -7.7 -3.92804 | TTGAATTTGAAGATT CAGCA TTG TGCTG TTTCATACTTTGTTG TERM 2131 1537684 - 1537642 - R 100 -7.9 -5.97575 | gap 1, opp_overlap 1537642 1537660 AAGGTATAAAAAAAA GGCTCTCCTAAACAAGATGA GTTA TCAACTC-TTTAGGACAGCC TTCTTTAAATTAGTG CPE1300 1539151 - 1537694 - | amino acid antiporter TERM 2132 1539256 - 1539274 + r 70 -4.6 -5.07523 | opp_overlap 1539257, overlap 1539257 TTGAGTTATAAACAT AGTTAACA TTT TGTTAACG TTTTGTTTATATATA TERM 2133 1539257 - 1539273 + r 75 -8.1 -3.62887 | opp_overlap 1539257, overlap 1539256 TGAGTTATAAACATA GTTAACA TTT TGTTAAC GTTTTGTTTATATAT TERM 2134 1539273 - 1539257 - R 74 -8.1 -3.34988 | opp_overlap 1539257 1539256 TGAGTTATAAACATA GTTAACA TTT TGTTAAC GTTTTGTTTATATAT TERM 2135 1539667 - 1539693 + r 73 -6.7 -4.26188 | opp_overlap 1539667 1539692 TATTATAAAAAAAAA TAGTATCCTTC ATGAA GAAGAATACTA TTTTAAATATATAAC TERM 2136 1539693 - 1539667 - R 100 -8.9 -6.26417 | opp_overlap 1539667, overlap 1539692 TATTATAAAAAAAAA TAGTATCCTTC ATGAA GAAGAATACTA TTTTAAATATATAAC pgm 1541256 - 1539718 - | phosphoglyceromutase TERM 2137 1541362 - 1541321 - R 87 -6.8 -5.28481 | opp_overlap 1541323 1541324 1541326, overlap 1541324 TACCTAATTAAAAAA CAATAGCAATAGACAATT GGTATT ACTTGCCTATTGCTACTA TTTAATTACTAATAT TERM 2138 1541359 - 1541324 - R 85 -8.5 -4.72473 | opp_overlap 1541324 1541323 1541326, overlap 1541321 CTAATTAAAAAACAA TAGCAATAGACAATT GGTATT ACTTGCCTATTGCTA CTATTTAATTACTAA tpiA 1542127 - 1541381 - | triosephosphate isomerase TERM 2139 1542308 - 1542262 - R 70 -7.7 -3.41527 | gap 1, opp_overlap 1542251 1542262, overlap 1542265 TAACTTTTAGCATAA TAAGGCTAAGATTCAATGAA AATTTAAA TTCATTGAA-CTTAGTCTTA TTTTTTTATAAAACA TERM 2140 1542262 - 1542308 + r 100 -9.9 -5.60993 | gap 1, opp_overlap 1542262 1542265, overlap 1542251 TAACTTTTAGCATAA TAAGGCTAAGATTCAATGAA AATTTAAA TTCATTGAA-CTTAGTCTTA TTTTTTTATAAAACA pgk 1543564 - 1542371 - | phosphoglycerate kinase TERM 2141 1543669 - 1543636 - R 76 -9.7 -2.93585 | opp_overlap 1543636, overlap 1543633 TTATATGTTAAAGTA GTCTGGCCTCATAGC TTTA ACTATAAAACCAGAC CCTTTTATATAATCA gapC 1544706 - 1543708 - | glyceraldehyde-3-phosphate dehydrogenase, type I CPE1305 1545876 - 1544797 - | transcriptional regulator TERM 2142 1545924 - 1545934 + r 73 -2.6 -5.80727 | overlap 1545930 GAAAAAATTAAAGGG TTTT TAG AAAA TTTTTTCTTATTTTT TERM 2143 1545967 - 1545935 - R 70 -5.9 -4.37092 | opp_overlap 1545930 AGGGTTTTTAGAAAA TTTTTTCTTATTTTT TTA AAAAATATAAAAAAA TATAGAGAGATTACC TERM 2144 1545968 - 1545995 + r 100 -10.8 -4.66163 | opp_overlap 1545968 AAAAATATAAAAAAA TATAGAGAGATT ACCC AGTCTCTCTATA TTTTTCACTCAAAAT TERM 2145 1545995 - 1545968 - R 100 -8.6 -5.9667 | opp_overlap 1545968 AAAAATATAAAAAAA TATAGAGAGATT ACCC AGTCTCTCTATA TTTTTCACTCAAAAT sigL 1547442 - 1546057 - | RNA polymerase factor sigma-54 TERM 2146 1546397 - 1546417 + g 72 -7.7 -3.64364 | overlap 1546396 TGTTCAGCTATTTCT TTTAAAGTC ATA GGCTTTAAA TATTTCTCTCCCTTT TERM 2147 1546470 - 1546487 + g 72 -2.7 -5.35815 | opp_overlap 1546473, overlap 1546473 CAAGTATTTTTTCAA GAACTTT GTAT AAAGTAC TTTTTCTTTGCTCTA TERM 2148 1547303 - 1547319 + g 71 -4.5 -4.74453 | opp_overlap 1547303 1547306, overlap 1547311 TGAGCTTCTAATACA GGATTTT CTG AAAATTC TTTTTCAATATATTC CPE1307 1548461 - 1547694 - | hypothetical protein TERM 2149 1548206 - 1548220 + g 81 -5.8 -5.24531 | CTTTTATGGCTCTAT TAATAC CTT GTATTA TTTTTTCTCCCCCAT CPE1308 1548957 - 1548448 - | hypothetical protein TERM 2150 1549277 - 1549252 - R 100 -8.3 -5.79595 | TTTCAAAATAAAAAA CTGGTACGGAT AACT ATCCCCACCAG TTAAAATAATTTACA CPE1309 1550630 - 1549560 - | hypothetical protein TERM 2151 1550694 - 1550723 + r 83 -10.9 -2.69259 | opp_overlap 1550699, overlap 1550699 1550703 GAAAATTTATGTAAA AAAAAGAAACTCC CTTA GGAGTTTCTTTTA ATATTCTTCTACATA TERM 2152 1550699 - 1550718 + r 100 -10.8 -4.50841 | opp_overlap 1550699, overlap 1550694 1550703 TTTATGTAAAAAAAA GAAACTCC CTTA GGAGTTTC TTTTAATATTCTTCT TERM 2153 1550718 - 1550699 - R 100 -10.8 -5.81412 | opp_overlap 1550694 1550699 1550703 TTTATGTAAAAAAAA GAAACTCC CTTA GGAGTTTC TTTTAATATTCTTCT TERM 2154 1550703 - 1550714 + r 73 -5.8 -4.77698 | opp_overlap 1550699, overlap 1550699 1550694 TGTAAAAAAAAGAAA CTCC CTTA GGAG TTTCTTTTAATATTC CPE1310 1551560 - 1550721 - | degV family protein TERM 2155 1551011 - 1550989 - G 71 -8.6 -2.80816 | overlap 1550993 TCCCCATCTAGTACA TTAAGCATAA GTT TTATGCCTAA GGCACTAACAAATAA CPE1311 1552036 - 1551575 - | hypothetical protein CPE1312 1552958 - 1552125 - | HAD hydrolase, IIB family TERM 2156 1553007 - 1552981 - R 100 -8.9 -5.07652 | gap 1, opp_overlap 1552981, overlap 1552963 1552962 CCTCCCAAAATAAAA GGAGAGAGTTAA TTTA TTAAC-CTCTCC CCCTTTTAGCATATT CPE1313 1554680 - 1553118 - | vanW-like family protein TERM 2157 1554358 - 1554380 + g 77 -5.7 -4.9138 | opp_overlap 1554358 GTTTCATCTATATTA TATTCTGGT GATAA ATCAGAATA TTTTATTTCAATACT TERM 2158 1554831 - 1554798 - R 100 -12.1 -4.82901 | opp_overlap 1554803 GCTTTTGGAGAAAAA TTAAATAGAGCTAAA AAAA TTTAACTCTATTTAA CATAAAAACCAATCT CPE1314 1555810 - 1554845 - | muramidase ddl 1556789 - 1555884 - | D-alanine--D-alanine ligase TERM 2159 1556848 - 1556811 - R 73 -6.6 -4.33258 | gap 1, opp_overlap 1556812 1556814, overlap 1556814 ACCTCCAAATAGAAA TAATTAAGGACTTGTCT TTTTT AAACAAGCCCTTAA-TA TTATATCATTATCTT TERM 2160 1556846 - 1556814 - R 95 -10.8 -4.27843 | opp_overlap 1556812 1556814, overlap 1556811 TCCAAATAGAAATAA TTAAGGACTTGTCT TTTTT AAACAAGCCCTTAA TATTATATCATTATC CPE1316 1559374 - 1556909 - | two-component sensor histidine kinase TERM 2161 1559596 - 1559583 - g 82 -5.3 -5.49569 | opp_overlap 1559576 1559583, overlap 1559576 CATCAATAGAAAAAA GTTTC TTTA GAAAC TTAGTTAGTTGTTTT TERM 2162 1560215 - 1560226 + G 71 -5.8 -4.40333 | CAAGTTATTTTTACT GCCT TAAT AGGC TTTGTATTATTTGGA CPE1317 1559474 - 1560337 + | hypothetical protein TERM 2163 1560337 - 1560368 + T 93 -8.9 -4.76802 | opp_overlap 1560343, overlap 1560343 AGAAGCTAGCAAATA AAAAAAGCTACAC TATTTT GTGTAGCTTTTTA TTTATTATTTTTAAA TERM 2164 1560343 - 1560362 + T 100 -7.9 -5.52807 | opp_overlap 1560343, overlap 1560337 TAGCAAATAAAAAAA GCTACAC TATTTT GTGTAGC TTTTTATTTATTATT TERM 2165 1560362 - 1560343 - T 100 -7.9 -5.99154 | opp_overlap 1560337 1560343 TAGCAAATAAAAAAA GCTACAC TATTTT GTGTAGC TTTTTATTTATTATT CPE1318 1560995 - 1560366 - | endonuclease III CPE1319 1561711 - 1561007 - | acyltransferase CPE1320 1562741 - 1561749 - | hypothetical protein TERM 2166 1562917 - 1562900 - R 72 -7.7 -3.65581 | ATTAATTTTTAATAA CTGCTGG AATT CCAACAG CGGTTTTTCCCTTTG cysE 1563395 - 1562886 - | serine O-acetyltransferase cysK 1564316 - 1563414 - | cysteine synthase A CPE1323 1565926 - 1564655 - | CBS domain/MgtE intracellular domain protein TERM 2167 1565218 - 1565228 + g 76 -6.8 -4.37157 | opp_overlap 1565218 1565217 CTGCAGTTTTAGAAT GGGA AAG TCCC TTTATTATACTACTT TERM 2168 1565942 - 1565970 + H 95 -10.7 -4.32046 | CCAGCTCTCCTCCTT TTTAATTTTAAAA AAA TTTTAAAATTAAA TTTCATTTTTAAGAA CPE1324 1566266 - 1567054 + | amino acid ABC transporter CPE1325 1567068 - 1567709 + | amino acid ABC transporter TERM 2169 1567756 - 1567738 - g 80 -2.4 -5.76237 | GATAGAAATAAAAAA CTTAGAGA AAT CCTTTAAG GGTAATAAAATATTA TERM 2170 1568289 - 1568276 - g 70 -5.3 -4.58303 | TCAAATATTATAAAA TCCTT AGCT AAGGA AAATATTGGGGTATT CPE1326 1567721 - 1568413 + | amino acid ABC transporter TERM 2171 1568560 - 1568516 - T 100 -15.5 -4.12037 | opp_overlap 1568512 1568521 TATAAATAGTATAAA GAGAATTACTAGATTTTAA GCGAAAG TCAAAATCTAGTAATTCTC AGAATCTGTTTATAA CPE1327 1569265 - 1568585 - | hypothetical protein CPE1328 1570219 - 1569338 - | putative lipid kinase CPE1329 1570535 - 1571056 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 2172 1571091 - 1571064 - T 100 -13 -5.4756 | opp_overlap 1571064 AATTTTAACAAAAAA TCCTATTAAAGA ATTT TCTTTAATAGGA TTTTTTATTATTTAT TERM 2173 1571064 - 1571091 + T 100 -13 -5.74288 | opp_overlap 1571064 AATTTTAACAAAAAA TCCTATTAAAGA ATTT TCTTTAATAGGA TTTTTTATTATTTAT CPE1330 1571453 - 1571103 - | hypothetical protein rubY 1572011 - 1571475 - | rubrerythrin spoVR 1573412 - 1572063 - | stage V sporulation protein R CPE1333 1574617 - 1573439 - | hypothetical protein TERM 2174 1574437 - 1574451 + g 72 -4.3 -5.08086 | ATTGATATTCCTTTA TTCCT CTAAT AGGAA TTTTATATTTTTTAT TERM 2175 1574574 - 1574588 + g 70 -5 -4.57209 | overlap 1574575 TCCTCTATAGATCTA TCATGT TCT ACATGG TTTTCTGCTTGATCT prkA 1576543 - 1574621 - | serine protein kinase TERM 2176 1575724 - 1575746 + g 75 -5.6 -4.7078 | GAGTTGCAGTTATTA TGGTGTGTAA ATA TTCCACATCA TTTTTAAATACTTCA TERM 2177 1576620 - 1576640 + r 100 -9.9 -4.7329 | opp_overlap 1576620, overlap 1576624 TTATAAAACAAAAAA GAAATTAGT AAA ACTAATTTC TTTTTCCATACTTTT TERM 2178 1576640 - 1576620 - R 100 -9.9 -5.86976 | opp_overlap 1576620 1576624 TTATAAAACAAAAAA GAAATTAGT AAA ACTAATTTC TTTTTCCATACTTTT TERM 2179 1576624 - 1576636 + r 70 -4.9 -4.89063 | opp_overlap 1576620, overlap 1576620 AAAACAAAAAAGAAA TTAGT AAA ACTAA TTTCTTTTTCCATAC recQ 1578411 - 1576633 - | ATP-dependent DNA helicase RecQ TERM 2180 1577142 - 1577156 + g 77 -8.6 -3.64912 | opp_overlap 1577135 TTAAAACACTTTCTC CAAAGG CTT CCTTTG TTCTATATATACATG TERM 2181 1578599 - 1578576 - R 79 -4 -5.64421 | gap 1, opp_overlap 1578570 1578566 ACTCTAAATAAAAAA GAGATTCTCTA ACT TA-AGAACCTC TTTTTGATTATTTCA thiE 1579265 - 1578642 - | thiamine-phosphate pyrophosphorylase thiM 1580055 - 1579258 - | hydroxyethylthiazole kinase thiD 1580861 - 1580067 - | phosphomethylpyrimidine kinase TERM 2182 1580917 - 1580890 - H 100 -13.6 -5.75538 | opp_overlap 1580890 TCTAAAAAAGAAAAA GCATATACAGCC CTAA GGCTATATATGC TTTAAAATCAATTTA TERM 2183 1580890 - 1580917 + H 95 -11.4 -3.62864 | opp_overlap 1580890 TCTAAAAAAGAAAAA GCATATACAGCC CTAA GGCTATATATGC TTTAAAATCAATTTA TERM 2184 1581445 - 1581490 + G 84 -8.6 -4.30809 | opp_overlap 1581445 GAATTAGCAAATAAA CTCTTCCCTTATGATTTTAA TGCACT TTCAAATTATAAGGGAAAAG TTTTAGTAGGTGTTA TERM 2185 1581490 - 1581445 - g 89 -8.6 -4.53349 | opp_overlap 1581445 GAATTAGCAAATAAA CTCTTCCCTTATGATTTTAA TGCACT TTCAAATTATAAGGGAAAAG TTTTAGTAGGTGTTA CPE1339 1581169 - 1582008 + | hypothetical protein TERM 2186 1582104 - 1582063 - T 100 -19.9 -3.41051 | opp_overlap 1582069, overlap 1582069 TTATTTTTACCATAA CTAAAAGAGACTACATAAA AAAT TTCATGTAGTCTCTTTTAG TAAATAAAATTAAAT TERM 2187 1582098 - 1582069 - T 100 -13.1 -4.51174 | opp_overlap 1582069, overlap 1582063 TTACCATAACTAAAA GAGACTACATAAA AAAT TTCATGTAGTCTC TTTTAGTAAATAAAA TERM 2188 1582069 - 1582098 + T 100 -10.9 -4.2828 | opp_overlap 1582069 1582063 TTACCATAACTAAAA GAGACTACATAAA AAAT TTCATGTAGTCTC TTTTAGTAAATAAAA CPE1340 1583139 - 1582126 - | LacI family transcriptional regulator TERM 2189 1583166 - 1583176 + H 70 -2.6 -5.52986 | TTACTTTTCTTATTT TATA TTA TATA TTTTTTTACTAAAAT CPE1341 1583357 - 1584421 + | galactoside ABC transporter TERM 2190 1584474 - 1584433 - f 100 -7.5 -5.3236 | opp_overlap 1584438, overlap 1584437 1584438 ATAATTTATAAAAAA TAAAGGGGCTATATCAAAA TTAA TTTTGATATATGCCCTTAA TAAAACAGGAGGTAA TERM 2191 1584470 - 1584437 - f 95 -8.3 -5.13354 | opp_overlap 1584438, overlap 1584433 1584438 TTTATAAAAAATAAA GGGGCTATATCAAAA TTAA TTTTGATATATGCCC TTAATAAAACAGGAG TERM 2192 1584438 - 1584470 + F 93 -11.6 -3.14132 | gap 1, opp_overlap 1584437 1584433 1584438 TTATAAAAAATAAAG GGGC-TATATCAAAA TTAA TTTTGATATATGCCC TTAATAAAACAGGAG TERM 2193 1584470 - 1584438 - f 95 -11.6 -3.66386 | gap 1, opp_overlap 1584438, overlap 1584437 1584433 TTATAAAAAATAAAG GGGC-TATATCAAAA TTAA TTTTGATATATGCCC TTAATAAAACAGGAG CPE1342 1584496 - 1586043 + | galactose/methyl galaxtoside transporter ATP-binding protein mglC 1586015 - 1587043 + | beta-methylgalactoside transporter inner membrane component TERM 2194 1587078 - 1587051 - T 100 -14.4 -5.57396 | opp_overlap 1587051 AGAACTAATAAAAAA TGTATGGAAGAA ATAT TTCTTCCATACA TTTTTTTACATATAC TERM 2195 1587051 - 1587078 + T 100 -14.4 -5.50499 | opp_overlap 1587051 AGAACTAATAAAAAA TGTATGGAAGAA ATAT TTCTTCCATACA TTTTTTTACATATAC CPE1344 1588106 - 1587084 - | aldose 1-epimerase galK 1588332 - 1589495 + | galactokinase TERM 2196 1589564 - 1589530 - f 82 -8.9 -4.10559 | opp_overlap 1589535 1589556 1589559, overlap 1589535 ATCAAAATATAATAA TAAAACTTACAAACA CATAC TCTTTGTAAGTTTTA TAAAAACCTATTTTG TERM 2197 1589559 - 1589535 - f 70 -4.4 -4.99312 | opp_overlap 1589535 1589556, overlap 1589530 AATATAATAATAAAA CTTACAAACA CATAC TCTTTGTAAG TTTTATAAAAACCTA TERM 2198 1589725 - 1589710 - g 70 -6.2 -4.04318 | opp_overlap 1589710 1589723 TGTATATACTAGAAA TAGACT TCTT AGTCTA TTTAATGAAAATAGT galT 1589618 - 1591114 + | galactose-1-phosphate uridylyltransferase TERM 2199 1591168 - 1591121 - T 75 -5.3 -4.93288 | gap 2, opp_overlap 1591122 1591123, overlap 1591123 AATAGCTAAATAAAA TAGAGATGTATCATTAATAAAGC TTAC ACTTTATTT-TGATACATCTC-A TTTATTTTAATATAC TERM 2200 1591122 - 1591168 + T 76 -6.2 -4.75288 | gap 1, opp_overlap 1591121 1591123, overlap 1591123 ATAGCTAAATAAAAT AGAGATGTATCATTAATAAAG CTTACA CTTTATTT-TGATACATCTCA TTTATTTTAATATAC TERM 2201 1591123 - 1591167 + T 82 -9.7 -3.44088 | gap 1, opp_overlap 1591123 1591121, overlap 1591122 TAGCTAAATAAAATA GAGATGTATCATTAATAAAG CTTACA CTTTATTT-TGATACATCTC ATTTATTTTAATATA TERM 2202 1591167 - 1591123 - T 95 -10.4 -4.07285 | gap 1, opp_overlap 1591122 1591123, overlap 1591121 TAGCTAAATAAAATA GAGATGTATCATTAATAAAGC TTAC ACTTTATTT-TGATACATCTC ATTTATTTTAATATA CPE1347 1592969 - 1591305 - | uridine kinase TERM 2203 1591726 - 1591738 + g 72 -2.7 -5.38951 | TAAACCTTAAACTTA TTCTT TGA AGGAA TTTTTTCTGTCAGTT CPE1348 1593091 - 1593789 + | hypothetical protein CPE1349 1593786 - 1594220 + | hypothetical protein TERM 2204 1594239 - 1594251 + F 84 -4.8 -5.65177 | TATTGAAAGGGGCAA GTCC CGCAT GGAC TTTTTTTGTCCCTAT alf2 1594317 - 1595183 + | fructose-1,6-bisphosphate aldolase, class II TERM 2205 1595204 - 1595224 + T 100 -11.3 -6.04953 | opp_overlap 1595204 TTAAATAATAAAAAA GAGATTAGA TTT TCTAATCTC TTTTTTTATTTCTCT TERM 2206 1595224 - 1595204 - T 100 -11.3 -5.72254 | opp_overlap 1595204 TTAAATAATAAAAAA GAGATTAGA TTT TCTAATCTC TTTTTTTATTTCTCT CPE1351 1596273 - 1595230 - | hypothetical protein TERM 2207 1595617 - 1595627 + g 70 -4 -4.96762 | overlap 1595622 CCACTCTTCTGTTGC CTTT ACA AAAG TTTTTGTCATATCTC TERM 2208 1595708 - 1595718 + g 72 -4 -5.09221 | opp_overlap 1595705 AGAGATAACTCATCC TCTT CTG AAGA TTTCTTTTTCTTATC CPE1352 1596413 - 1596976 + | hypothetical protein TERM 2209 1597092 - 1597050 - T 95 -9.5 -4.90778 | opp_overlap 1597052, overlap 1597052 TTTATTTAAAGAAAA GACATTATATAGTTTTGTT TTTTT AACAAAGCTATATAATGTT CTCTAATCCCCTTTT TERM 2210 1597090 - 1597052 - T 100 -12.1 -4.07285 | opp_overlap 1597052, overlap 1597050 TATTTAAAGAAAAGA CATTATATAGTTTTGTT TTTTT AACAAAGCTATATAATG TTCTCTAATCCCCTT TERM 2211 1597052 - 1597090 + T 100 -14.3 -3.55219 | opp_overlap 1597052 1597050 TATTTAAAGAAAAGA CATTATATAGTTTTGTT TTTTT AACAAAGCTATATAATG TTCTCTAATCCCCTT TERM 2212 1597186 - 1597163 - T 73 -2.6 -5.77632 | opp_overlap 1597163 AAAATCATAAAAAAA TATAATTAAT CTCC ATAAATTATA TATTTTTTTATTTAA CPE1353 1597828 - 1597424 - | hypothetical protein TERM 2213 1597901 - 1597940 + r 86 -9.6 -4.00476 | opp_overlap 1597902, overlap 1597902 GAATAAATAAAAAAA ACAAGTCATATTTAGTAA GCTA TTACTAAATATAACTTGC TTTATAATAAATTTA TERM 2214 1597902 - 1597939 + r 95 -13.1 -2.99562 | opp_overlap 1597902, overlap 1597901 AATAAATAAAAAAAA CAAGTCATATTTAGTAA GCTA TTACTAAATATAACTTG CTTTATAATAAATTT TERM 2215 1597939 - 1597902 - R 100 -15.3 -6.32017 | opp_overlap 1597902 1597901 AATAAATAAAAAAAA CAAGTCATATTTAGTAA GCTA TTACTAAATATAACTTG CTTTATAATAAATTT entB 1599616 - 1597967 - | enterotoxin TERM 2216 1599503 - 1599518 + g 72 -4.8 -4.97666 | TGTTTGATTATTTTC TTCTAA TTGA TTAGAA TTTTTATGCTCTGTT TERM 2217 1599772 - 1599742 - R 95 -6.3 -6.04419 | gap 1, opp_overlap 1599742 1599740 1599745 AAAATAACAAAAAAA GAAGTTGTCTCTAT TTAA ATTG-GACAACTTC TATGTTCTATCATCT CPE1355 1600150 - 1599782 - | hypothetical protein CPE1356 1600338 - 1600724 + | hypothetical protein TERM 2218 1600733 - 1600762 + T 77 -7.9 -4.12225 | opp_overlap 1600735, overlap 1600735 GCTTTAAAAAGTAAA AAGAAGCCACATA AAAC TTTGTGGCTTCTC TTTCATTTAATAATT TERM 2219 1600735 - 1600760 + T 91 -10.5 -3.64541 | opp_overlap 1600735, overlap 1600733 TTTAAAAAGTAAAAA GAAGCCACATA AAAC TTTGTGGCTTC TCTTTCATTTAATAA TERM 2220 1600760 - 1600735 - T 100 -10.5 -5.18355 | opp_overlap 1600735 1600733 TTTAAAAAGTAAAAA GAAGCCACATA AAAC TTTGTGGCTTC TCTTTCATTTAATAA CPE1357 1601335 - 1600850 - | ybaK/ebsC protein TERM 2221 1601791 - 1601779 - R 83 -3.4 -6.15717 | GAAATATAAAAAAAA CACT CTATC AGTG AACTGTCTAATCTCT TERM 2222 1601899 - 1601925 + r 71 -6.6 -4.16842 | opp_overlap 1601903, overlap 1601903 AAAAAGTATATAAAT AAAAGGCTGATA TAA TATCAGCCTTAA TTTGTTGAAGCTACC TERM 2223 1601903 - 1601921 + r 95 -11.8 -3.68738 | opp_overlap 1601903, overlap 1601899 AGTATATAAATAAAA GGCTGATA TAA TATCAGCC TTAATTTGTTGAAGC TERM 2224 1601921 - 1601903 - R 100 -11.8 -5.06016 | opp_overlap 1601903 1601899 AGTATATAAATAAAA GGCTGATA TAA TATCAGCC TTAATTTGTTGAAGC CPE1358 1603226 - 1601922 - | hypothetical protein TERM 2225 1602110 - 1602126 + g 71 -2.3 -5.43487 | TTTGATCTTTTTCCT TATTTTC TTC GACAATA TTTTTTATATCATTT CPE1359 1603748 - 1603308 - | hypothetical protein TERM 2226 1603706 - 1603716 + g 76 -2.6 -5.63645 | TATCTATTTCTTTTC TTTT TTT AAAA TTTTTTATATTTTCC CPE1360 1604158 - 1603772 - | hypothetical protein TERM 2227 1604216 - 1604250 + r 71 -7.2 -3.86733 | opp_overlap 1604220, overlap 1604220 1604247 AAATTTGTAAACAAA AAAAGTCTAGTTAGGA GTA TCCCAACTAGACTTAA TTATTAATCTTTAAT TERM 2228 1604220 - 1604246 + r 95 -12.4 -3.57816 | opp_overlap 1604220, overlap 1604216 TTGTAAACAAAAAAA GTCTAGTTAGGA GTA TCCCAACTAGAC TTAATTATTAATCTT TERM 2229 1604246 - 1604220 - R 100 -14.6 -5.95539 | opp_overlap 1604220 1604216 TTGTAAACAAAAAAA GTCTAGTTAGGA GTA TCCCAACTAGAC TTAATTATTAATCTT CPE1361 1605129 - 1604254 - | hypothetical protein CPE1362 1606051 - 1605491 - | hypothetical protein CPE1363 1607080 - 1606130 - | ribonuclease Z TERM 2230 1607140 - 1607179 + r 100 -10.4 -6.04953 | gap 1, opp_overlap 1607133 1607148 AAATAATATTTATTA TAA-AAAAAGACCAAAATC AAA GATTCTGGTCTTTTTCTTA TTTTTTTATTTCTCT TERM 2231 1607170 - 1607148 - R 100 -11.4 -5.67063 | opp_overlap 1607140 TTTATTATAAAAAAA GACCAAAATC AAA GATTCTGGTC TTTTTCTTATTTTTT CPE1364 1611608 - 1607193 - | hypothetical protein TERM 2232 1610159 - 1610143 - G 74 -2.2 -5.56372 | AAAGTAAAATAAAAA TCTCCT TCTAC AGGTGA ACTTGAGTAAACTAT TERM 2233 1610629 - 1610606 - G 72 -6.8 -4.17023 | CTAATGAGTTTAAAA CTTCATCTAA ATCA CCAGATGAAG GAATCTCTCCATTAT TERM 2234 1611896 - 1611879 - g 86 -7.1 -5.06585 | CAAACTACATAAAAA TAGCTAT TGAT ATAGCTA ATAGAGTTTTAAATA TERM 2235 1612368 - 1612349 - g 81 -6.5 -5.10933 | GGAGTTAAAAGAAAA GGAGAAA TGTTCC TTTCTCC AGGACCTTATTTCAA CPE1365 1611842 - 1612468 + | hypothetical protein TERM 2236 1612517 - 1612476 - T 100 -11.1 -5.00339 | opp_overlap 1612478, overlap 1612478 ATGAATAACTAAAAA GAGAAGTATGATATATCCT CTTA AGGTCATATCATACTTCTT TTTTTATAAATAACT TERM 2237 1612478 - 1612515 + T 100 -11.5 -5.64274 | opp_overlap 1612476 1612478 GAATAACTAAAAAGA GAAGTATGATATATCCT CTTA AGGTCATATCATACTTC TTTTTTTATAAATAA TERM 2238 1612515 - 1612478 - T 100 -13.7 -4.11092 | opp_overlap 1612478, overlap 1612476 GAATAACTAAAAAGA GAAGTATGATATATCCT CTTA AGGTCATATCATACTTC TTTTTTTATAAATAA CPE1366 1613273 - 1612521 - | hypothetical protein TERM 2239 1613249 - 1613259 + g 70 -4 -4.96388 | opp_overlap 1613249, overlap 1613244 CAATTCCAATCATAA GAAA CTC TTTC TTTTGTTTGCTCATT CPE1367 1614513 - 1613365 - | hypothetical protein CPE1368 1619726 - 1614594 - | hypothetical protein TERM 2240 1614962 - 1614988 + g 100 -9.6 -5.77677 | opp_overlap 1614957 CAAAAGTTAATTCCT TAGATTCATTAG CAC CTAAAGAATCTA TTTTTTCTTCTTTTA TERM 2241 1619951 - 1619919 - R 100 -9.4 -5.95946 | opp_overlap 1619919 TTAACAATAAAAAAA CCAATTCATAGTCT ATTTA AAACTATAAATTGG TTCATATCATAATCA CPE1369 1620467 - 1619964 - | GNAT family acetyltransferase TERM 2242 1621330 - 1621319 - g 78 -3 -5.60864 | GATACAGCAAAAAAA TATG ATTT CATA TTAGAATTTAATGCA hisB 1620776 - 1621555 + | histidinol phosphatase TERM 2243 1621716 - 1621766 + F 79 -8.7 -3.77325 | gap 2, opp_overlap 1621692 1621715 1621713 1621734, overlap 1621712 1621720 TATGATTGAATATAT GCAGTCATAGATACAAACTCCAAAG AAA TTTTGGA-T-TGTATCTATGATGGC TTAATTTTCGTTATA TERM 2244 1621720 - 1621762 + F 72 -8.9 -2.6652 | gap 2, opp_overlap 1621692 1621715 1621713 1621734, overlap 1621716 1621712 ATTGAATATATGCAG TCATAGATACAAACTCCAAAG AAA TTTTGGA-T-TGTATCTATGA TGGCTTAATTTTCGT TERM 2245 1621838 - 1621866 + F 100 -14.1 -5.59879 | opp_overlap 1621863, overlap 1621835 AGTTTTAATACCCTA TAGGTCGTATAGT TTA ACTATATGACCTA TTTTTTATATTTATA CPE1371 1621905 - 1623218 + | sodium- and chloride- dependent transporter TERM 2246 1623425 - 1623446 + F 100 -9.5 -5.96894 | opp_overlap 1623425 GGGCTGTATTTAACA CCGGATCTA TATT TAGATTCGG TTTTTTTATTTACAT CPE1372 1623511 - 1624206 + | putative proton-coupled thiamine transporter YuaJ TERM 2247 1624247 - 1624213 - f 83 -8 -4.67048 | opp_overlap 1624217 1624243, overlap 1624217 GCATCTTAAAATAAA GTAAGGTCTAGATTTC ATT AAAATCTAGACCTTTT TATTTTTTAATTAAA TERM 2248 1624243 - 1624217 - f 100 -13.2 -3.81954 | opp_overlap 1624217, overlap 1624213 CTTAAAATAAAGTAA GGTCTAGATTTC ATT AAAATCTAGACC TTTTTATTTTTTAAT TERM 2249 1624217 - 1624243 + F 100 -12.5 -5.77571 | opp_overlap 1624217 1624213 CTTAAAATAAAGTAA GGTCTAGATTT CATTA AAATCTAGACC TTTTTATTTTTTAAT hisC 1624315 - 1625391 + | aminotransferase family protein CPE1374 1626568 - 1625522 - | calcium/proton exchanger TERM 2250 1626870 - 1626857 - R 86 -3.8 -6.07969 | opp_overlap 1626857 1626854 TAAAAGCAAAAAAAA CGCT ATTTTA AGCG TTCTTTTAATTAATT CPE1375 1628305 - 1627010 - | phosphodiesterase/nucleotide pyrophosphatase family protein TERM 2251 1627194 - 1627217 + g 82 -4 -5.51046 | gap 1 CTAGGTGAATATCCA TGAAC-TGCTT TGT AAGTATGTTCA TTTTTTATATCTTTA CPE1376 1628697 - 1628362 - | hypothetical protein CPE1377 1629248 - 1628835 - | hypothetical protein TERM 2252 1629407 - 1629434 + r 91 -12.9 -2.8337 | opp_overlap 1629407, overlap 1629404 1629402 AATATTAAAGAAAAA GCTGTCATTAC TTCTAC GTAATGACAGC TACTATATATTTTTT TERM 2253 1629434 - 1629407 - R 100 -12.9 -5.37171 | opp_overlap 1629407 1629404 1629402 AATATTAAAGAAAAA GCTGTCATTAC TTCTAC GTAATGACAGC TACTATATATTTTTT CPE1378 1630359 - 1629448 - | hypothetical protein CPE1379 1631184 - 1630393 - | D-alanyl-D-alanine carboxypeptidase TERM 2254 1630830 - 1630818 - G 71 -4.9 -4.77036 | opp_overlap 1630818 TTGCATCACTAAAAA GATTT TCT AAATC TTTCTTTAATACATT TERM 2255 1631415 - 1631451 + r 82 -9.7 -3.43084 | opp_overlap 1631401 1631407 1631420, overlap 1631420 GTTTAAAGTAATTTA AAAAAGTACTAAAAGAT TTT AACTTTTAGTACTTTTA ATTTATTTTGATACT TERM 2256 1631420 - 1631446 + r 95 -9.6 -4.76478 | opp_overlap 1631407 1631420, overlap 1631415 AAGTAATTTAAAAAA GTACTAAAAGAT TTT AACTTTTAGTAC TTTTAATTTATTTTG TERM 2257 1631446 - 1631420 - R 100 -9.6 -5.1848 | opp_overlap 1631420 1631415, overlap 1631407 AAGTAATTTAAAAAA GTACTAAAAGAT TTT AACTTTTAGTAC TTTTAATTTATTTTG CPE1380 1631780 - 1631454 - | hypothetical protein TERM 2258 1631962 - 1631981 + H 73 -7.9 -3.72576 | opp_overlap 1631962 TTATTAATAAAAAAA CACCTGA TAATAT TCAGGTG TTTGGTGCCGAAGAC TERM 2259 1631981 - 1631962 - H 100 -7.9 -5.84381 | opp_overlap 1631962 TTATTAATAAAAAAA CACCTGA TAATAT TCAGGTG TTTGGTGCCGAAGAC CPE1381 1632265 - 1633206 + | hypothetical protein TERM 2260 1633203 - 1633236 + T 100 -14.2 -5.72254 | opp_overlap 1633208 AATAAGTATGTATTT TTAAAGCCTTCTAA TTAATT TTAGAAGGCTTTAA TTTTTTATTATTTAG TERM 2261 1633231 - 1633208 - T 83 -9.7 -3.57792 | opp_overlap 1633203 GTATGTATTTTTAAA GCCTTCTAA TTAATT TTAGAAGGC TTTAATTTTTTATTA map 1634113 - 1633244 - | methionine aminopeptidase, type I CPE1383 1635057 - 1634461 - | hypothetical protein TERM 2262 1635123 - 1635144 + H 73 -7.5 -3.66424 | opp_overlap 1635123 AATAATAATAAAAAA TAGATTATA TGCA TATAATCTA TTTGAGGTGATTTTA TERM 2263 1635144 - 1635123 - H 100 -7.5 -5.70522 | opp_overlap 1635123 AATAATAATAAAAAA TAGATTATA TGCA TATAATCTA TTTGAGGTGATTTTA CPE1384 1635159 - 1636082 + | hypothetical protein CPE1385 1636791 - 1636222 - | hypothetical protein TERM 2264 1636842 - 1636871 + r 95 -12.3 -3.79113 | TATAATTTTTTATTT TTTTAGGAGGGTT AAAA AACCCTCCAAAAA TTATTCTAACAACAT CPE1386 1637134 - 1636877 - | hypothetical protein CPE1387 1637371 - 1637156 - | hypothetical protein CPE1388 1637889 - 1637407 - | hypothetical protein TERM 2265 1638048 - 1638018 - R 100 -17.8 -5.45726 | opp_overlap 1638018 1638021 TATACTTCAAAAAAA GAAGCTGCGAAGAT AAA ATCTTCACAGCTTC TTTAATAATATATTC TERM 2266 1638018 - 1638048 + r 100 -15.6 -3.8448 | opp_overlap 1638018, overlap 1638021 TATACTTCAAAAAAA GAAGCTGCGAAGAT AAA ATCTTCACAGCTTC TTTAATAATATATTC TERM 2267 1638021 - 1638045 + r 100 -11.5 -4.03811 | opp_overlap 1638018, overlap 1638018 ACTTCAAAAAAAGAA GCTGCGAAGAT AAA ATCTTCACAGC TTCTTTAATAATATA CPE1389 1638699 - 1638106 - | GTPase EngB TERM 2268 1638198 - 1638215 + g 78 -6.3 -4.77775 | ACTTAAGTTTGTGAT CTTTAGG TAAT CCTAGAG TTTCTTTTATAAGCT TERM 2269 1638507 - 1638491 - G 77 -4.5 -5.33405 | overlap 1638477 1638493 TCTACTAAATAAAAA TCCTTAT TTA ATAAGAA GAAATTTATTAATCT lonA 1641029 - 1638699 - | ATP-dependent protease La TERM 2270 1638852 - 1638863 + g 78 -4.4 -5.45802 | AATTCCTACTCTTCT TGCT GCTA AGCA TTTTTCTTTTAAACC TERM 2271 1639722 - 1639741 + g 78 -9.4 -3.23711 | TAGTAAGGCATCAGC TGGATTTC CTTT GAAATCCA TTCCTAACTTATCAA TERM 2272 1641086 - 1641050 - R 72 -4 -5.40072 | opp_overlap 1641057 1641065, overlap 1641057 TCCCCTCCAAAAAAA TTAATAACTACATATT ATATA AATATATAGTCTTTAA CAAGTATACACATAT TERM 2273 1641166 - 1641138 - R 100 -14.1 -4.42788 | opp_overlap 1641138 1641142, overlap 1641143 TTTAATTCCATAAAA GAAAACTAACACT TTA AGTGTTAGCTTTC TTTATAGATTCTGCA TERM 2274 1641138 - 1641166 + r 100 -11.9 -4.00066 | opp_overlap 1641138 1641143, overlap 1641142 TTTAATTCCATAAAA GAAAACTAACACT TTA AGTGTTAGCTTTC TTTATAGATTCTGCA TERM 2275 1641142 - 1641162 + r 77 -6.9 -4.59089 | opp_overlap 1641138 1641143, overlap 1641138 ATTCCATAAAAGAAA ACTAACACT TTA AGTGTTAGC TTTCTTTATAGATTC TERM 2276 1641161 - 1641143 - R 100 -10.4 -5.18371 | opp_overlap 1641142 1641138, overlap 1641138 TTCCATAAAAGAAAA CTAACACT TTA AGTGTTAG CTTTCTTTATAGATT lonB 1642863 - 1641151 - | Lon-like ATP-dependent protease TERM 2277 1642973 - 1642938 - R 100 -8.7 -5.28826 | gap 1, opp_overlap 1642945, overlap 1642945 AAACTCCATAAAAAA TA-AAAAAGATGCATA AATAG TATGCATCTTTTTCTA TTAAGCAGTTTCTAT TERM 2278 1642965 - 1642945 - R 100 -8.4 -6.07374 | opp_overlap 1642945, overlap 1642938 ATAAAAAATAAAAAA GATGCATA AATAG TATGCATC TTTTTCTATTAAGCA TERM 2279 1642945 - 1642965 + r 91 -8.4 -5.0916 | opp_overlap 1642938 1642945 ATAAAAAATAAAAAA GATGCATA AATAG TATGCATC TTTTTCTATTAAGCA clpX 1644281 - 1642974 - | ATP-dependent protease ATP-binding subunit clpP 1644905 - 1644321 - | ATP-dependent Clp protease proteolytic subunit TERM 2280 1645038 - 1645083 + r 81 -7.1 -4.86861 | opp_overlap 1645032 1645046 1645049, overlap 1645032 1645039 1645049 TAAACAAACTTTTAA TTTTAAAATAATTGCCAAGAA ATAC TTCCTGGCAATTATCTGAAAG TTTATTTATTTATTA TERM 2281 1645039 - 1645082 + r 75 -8.4 -3.49677 | opp_overlap 1645032 1645046 1645049, overlap 1645032 1645038 1645049 AAACAAACTTTTAAT TTTAAAATAATTGCCAAGAA ATAC TTCCTGGCAATTATCTGAAA GTTTATTTATTTATT TERM 2282 1645075 - 1645046 - R 100 -13.1 -4.19238 | opp_overlap 1645039 1645038 1645049, overlap 1645049 CTTTTAATTTTAAAA TAATTGCCAAGAA ATAC TTCCTGGCAATTA TCTGAAAGTTTATTT TERM 2283 1645072 - 1645049 - R 95 -10.4 -4.21933 | opp_overlap 1645049 1645039 1645038, overlap 1645046 TTAATTTTAAAATAA TTGCCAAGAA ATAC TTCCTGGCAA TTATCTGAAAGTTTA TERM 2284 1645049 - 1645072 + r 75 -8.2 -3.51161 | opp_overlap 1645046 1645049, overlap 1645039 1645038 TTAATTTTAAAATAA TTGCCAAGAA ATAC TTCCTGGCAA TTATCTGAAAGTTTA tig 1646382 - 1645096 - | trigger factor TERM 2285 1646438 - 1646458 + r 75 -4.1 -5.626 | opp_overlap 1646442 TATGAATTAACCTAG GCAATTATA ACA TATAATTTC TTTTTTTATCAAATA CPE1395 1647298 - 1646480 - | hypothetical protein TERM 2286 1646762 - 1646713 - G 70 -8.1 -3.2032 | opp_overlap 1646722 1646723 1646742, overlap 1646712 1646716 1646721 1646722 CGTTTATATGAAAAT TAATTAAATCCCTCCCCATGATA TCAA TATAATGGAGAGGATTTTCATTA CTTTTATATGCTTGT TERM 2287 1646753 - 1646722 - G 72 -8.8 -3.0352 | opp_overlap 1646722 1646723 1646742, overlap 1646721 1646716 1646713 1646712 GAAAATTAATTAAAT CCCTCCCCATGATA TCAA TATAATGGAGAGGA TTTTCATTACTTTTA TERM 2288 1647016 - 1646997 - G 72 -5 -4.82154 | opp_overlap 1646986 1646997 AAGGTATATGAAAAA GCTCCTAA TTTA TTAGTAGC TTTGCATATATTCTT CPE1396 1647504 - 1649090 + | ATP-dependent RNA helicase, DEAD/DEAH box family TERM 2289 1649134 - 1649088 - T 100 -10.7 -5.55855 | gap 1, opp_overlap 1649101, overlap 1649101 GCTAAAAAAAGAAAA TAATATAAAAAAATACATACTC ATAT GAGTATGTATTTTTTT-TATTT ATTCTTACAACAACC TERM 2290 1649122 - 1649101 - T 100 -10.3 -5.86465 | opp_overlap 1649101, overlap 1649088 AATAATATAAAAAAA TACATACTC ATAT GAGTATGTA TTTTTTTTATTTATT TERM 2291 1649101 - 1649122 + T 100 -10.3 -6.32017 | opp_overlap 1649101 1649088 AATAATATAAAAAAA TACATACTC ATAT GAGTATGTA TTTTTTTTATTTATT CPE1397 1649392 - 1649129 - | hypothetical protein pfs 1649585 - 1650292 + | purine nucleoside phosphorylase TERM 2292 1650299 - 1650332 + T 100 -12.7 -5.48514 | opp_overlap 1650300, overlap 1650300 ACTTTATAAAATAAA AGAGCTTTATCAAAA TAAC TTTTGATAAAGCTCC TTTTTATTTATTAAT TERM 2293 1650300 - 1650331 + T 100 -16.2 -3.86668 | opp_overlap 1650300, overlap 1650299 CTTTATAAAATAAAA GAGCTTTATCAAAA TAAC TTTTGATAAAGCTC CTTTTTATTTATTAA TERM 2294 1650331 - 1650300 - T 100 -16.2 -5.18371 | opp_overlap 1650300 1650299 CTTTATAAAATAAAA GAGCTTTATCAAAA TAAC TTTTGATAAAGCTC CTTTTTATTTATTAA CPE1399 1651626 - 1650343 - | hypothetical protein TERM 2295 1650469 - 1650479 + g 76 -2.6 -5.51612 | TTCACTTTTAACATC TATT CCT AATA TTTTCTTTTTTATCT TERM 2296 1651002 - 1651024 + g 95 -6.4 -5.89921 | AAGGTATGTCTATCT TATTGTTATC CAT GAAAACAATA TTTTTTTCTTCTACT CPE1400 1651981 - 1651637 - | hypothetical protein CPE1401 1653073 - 1652165 - | DNA polymerase III subunit epsilon CPE1402 1656241 - 1653320 - | zinc metalloprotease TERM 2297 1656524 - 1656481 - R 95 -11.5 -3.60971 | opp_overlap 1656486 1656488, overlap 1656488 ATGTTAATTTCTAAA TAAAAAAGAAATGATATAA CTAAAT CTATATCATTTCTCTTTTA GCTTAAGATTATTCC TERM 2298 1656517 - 1656488 - R 93 -7.4 -5.63517 | opp_overlap 1656486 1656488, overlap 1656481 TTTCTAAATAAAAAA GAAATGATATAA CTAAAT CTATATCATTTC TCTTTTAGCTTAAGA CPE1403 1656885 - 1656616 - | hypothetical protein CPE1404 1657055 - 1658206 + | hypothetical protein TERM 2299 1658250 - 1658221 - T 100 -12.5 -5.20783 | opp_overlap 1658221 ATTTAAATATAAAAA TGATATGTATTAA AGTT TTAATACATATCA TTTTTAACTATAGTT TERM 2300 1658221 - 1658250 + T 100 -12.5 -4.72333 | opp_overlap 1658221 ATTTAAATATAAAAA TGATATGTATTAA AGTT TTAATACATATCA TTTTTAACTATAGTT CPE1405 1658983 - 1658258 - | N-acetylmuramoyl-L-alanine amidase TERM 2301 1659036 - 1659017 - H 77 -6.6 -4.58585 | opp_overlap 1659002 TATTTAAATAATAAA TAGTATTT CTCT AAATACTA AAAAATATTATTCAC CPE1406 1659141 - 1659347 + | hypothetical protein CPE1407 1659365 - 1659718 + | hypothetical protein TERM 2302 1659781 - 1659742 - T 100 -13.2 -5.5762 | opp_overlap 1659742 ACTAAATATAAAAAA GACACTAAGAAAATTTAT TTTT ACAAATTCTCCTAGTGTC TTTTTTTAAATTCTT TERM 2303 1659742 - 1659781 + T 88 -6.6 -5.57054 | opp_overlap 1659742 ACTAAATATAAAAAA GACACTAAGAAAATTTAT TTTT ACAAATTCTCCTAGTGTC TTTTTTTAAATTCTT CPE1408 1661417 - 1659846 - | hypothetical protein TERM 2304 1659906 - 1659893 - G 72 -6.7 -4.08692 | opp_overlap 1659892, overlap 1659895 GAATTTCTTCTAAAA CAGAG CTTG CTCTG CTCTCATCAACCATA TERM 2305 1661876 - 1661863 - g 74 -6.7 -4.31698 | opp_overlap 1661862 1661863 GTAAATGAAAAAATA GCTGA TTCT TCAGC CTTTGTTTCTTCTCC CPE1409 1661680 - 1662990 + | hypothetical protein TERM 2306 1663424 - 1663440 + G 88 -8.7 -4.46212 | opp_overlap 1663421 1663424 AATTTTATGAATCCA GCCTTAG CAG CTAGGGC TTTTCTACTAGCAGC CPE1410 1663004 - 1663984 + | Na-translocating NADH-quinone reductase Nqr2 subunit TERM 2307 1664200 - 1664234 + T 90 -10.3 -3.38158 | gap 1, opp_overlap 1664198 1664200 TCTTATTCATTAAGA TAGCTCAGAAGG-ATT TTAA AATACTTTCTGAGCTA TTACGTTATTTTAAT TERM 2308 1664234 - 1664200 - T 72 -8.1 -3.1552 | gap 1, opp_overlap 1664200, overlap 1664198 TCTTATTCATTAAGA TAGCTCAG-AAGGATT TTAA AATACTTTCTGAGCTA TTACGTTATTTTAAT CPE1411 1664564 - 1664307 - | hypothetical protein thiI 1665849 - 1664692 - | thiamine biosynthesis/tRNA modification protein ThiI nifS 1666991 - 1665846 - | aminotransferase, class V TERM 2309 1666162 - 1666178 + g 72 -4.5 -4.9792 | opp_overlap 1666162, overlap 1666163 CTATTTATTACTACA TTTTCTA TTT TAGAAAG TTTTTCTATAAAATA TERM 2310 1667159 - 1667130 - R 100 -13.1 -5.82388 | opp_overlap 1667130, overlap 1667156 AAATTTCAAAAAAAA TTCCCAACTTAGA TTAT TCTAAGTTAGGAA TTTTTCTATTCCATG TERM 2311 1667130 - 1667159 + r 100 -10.9 -5.10767 | opp_overlap 1667130 1667156 AAATTTCAAAAAAAA TTCCCAACTTAGA TTAT TCTAAGTTAGGAA TTTTTCTATTCCATG pheB 1667602 - 1667165 - | hypothetical protein TERM 2312 1667981 - 1667923 - R 74 -6 -4.63218 | gap 3, opp_overlap 1667930 1667941, overlap 1667930 1667934 TGTTCTCTAATAAAA GACACATGAAATTAATAAGAGGATATATC TTTT GATATATCCTCTTATTAATTCC-T-TAT- TAAAGCACTATTTCA TERM 2313 1667977 - 1667930 - R 100 -22.6 -2.59379 | opp_overlap 1667930 1667941, overlap 1667923 1667934 TAATAAAAGACACAT GAAATTAATAAGAGGATATATC TTTT GATATATCCTCTTATTAATTCC TTATTAAAGCACTAT TERM 2314 1667930 - 1667977 + r 100 -20.4 -3.62224 | opp_overlap 1667923 1667930 1667934, overlap 1667941 TAATAAAAGACACAT GAAATTAATAAGAGGATATATC TTTT GATATATCCTCTTATTAATTCC TTATTAAAGCACTAT TERM 2315 1667973 - 1667934 - R 100 -19.8 -3.95893 | opp_overlap 1667930 1667941, overlap 1667930 1667923 AAAAGACACATGAAA TTAATAAGAGGATATATC TTTT GATATATCCTCTTATTAA TTCCTTATTAAAGCA TERM 2316 1667941 - 1667966 + r 100 -13.5 -3.86634 | opp_overlap 1667934 1667930 1667923, overlap 1667930 ACATGAAATTAATAA GAGGATATATC TTTT GATATATCCTC TTATTAATTCCTTAT CPE1415 1670560 - 1667981 - | hypothetical protein CPE1416 1671250 - 1670669 - | hypothetical protein CPE1417 1672128 - 1671289 - | hypothetical protein CPE1418 1672370 - 1673098 + | hypothetical protein TERM 2317 1673104 - 1673128 + T 100 -14.5 -5.7827 | opp_overlap 1673104 AGGAAGATAAAAAAA TCCATGAGTAA ATT TTACTCATGGA TTTTTTATTTATATT TERM 2318 1673128 - 1673104 - T 100 -14.5 -5.82172 | opp_overlap 1673104 AGGAAGATAAAAAAA TCCATGAGTAA ATT TTACTCATGGA TTTTTTATTTATATT CPE1419 1674530 - 1673142 - | amino acid ABC transporter TERM 2319 1674566 - 1674539 - R 90 -5.6 -5.93809 | TTTCCATAAAAAAAA TCCTCCTTAAAT TTAA ATTTGCGGAGGA GAATAAGGATACTTA CPE1420 1675493 - 1674837 - | poly A polymerase CPE1421 1675816 - 1676568 + | hypothetical protein TERM 2320 1676625 - 1676585 - f 72 -7.8 -3.62291 | opp_overlap 1676586 1676587 1676619 1676624, overlap 1676583 1676587 1676624 TTAAGATTATAAATA TATTTTAGCGTATAGCTT ACTTA AAGTTATACGCTAAAACT TTATTAAGTTATTAG TERM 2321 1676586 - 1676624 + F 100 -11.3 -4.29073 | opp_overlap 1676585 1676583 1676587, overlap 1676587 1676619 TAAGATTATAAATAT ATTTTAGCGTATAGCTT ACTTA AAGTTATACGCTAAAAC TTTATTAAGTTATTA TERM 2322 1676587 - 1676623 + F 100 -14.8 -3.16359 | opp_overlap 1676587 1676585 1676583, overlap 1676586 1676619 AAGATTATAAATATA TTTTAGCGTATAGCTT ACTTA AAGTTATACGCTAAAA CTTTATTAAGTTATT TERM 2323 1676623 - 1676587 - f 95 -12.6 -3.37902 | opp_overlap 1676586 1676587 1676619, overlap 1676585 1676583 AAGATTATAAATATA TTTTAGCGTATAGCTT ACTTA AAGTTATACGCTAAAA CTTTATTAAGTTATT TERM 2324 1676646 - 1676662 + F 73 -6.7 -4.3341 | opp_overlap 1676645 1676646, overlap 1676619 AAGTTATTAGTAAAG GTTTAAA TTT TTTAAAC TTTATATTAATTTTA CPE1422 1676773 - 1677750 + | hypothetical protein TERM 2325 1677787 - 1677759 - f 100 -11.9 -5.04601 | opp_overlap 1677759 TGTATAAATTAAAAA GCTCAAACAGA TAATAAT TCTGTTTGAGC TTTTTTCAAAGATAT TERM 2326 1677759 - 1677787 + F 100 -11.9 -5.02476 | opp_overlap 1677759 TGTATAAATTAAAAA GCTCAAACAGA TAATAAT TCTGTTTGAGC TTTTTTCAAAGATAT sas2 1677991 - 1678173 + | small acid-soluble spore protein C2 TERM 2327 1678223 - 1678171 - T 100 -14.8 -4.04141 | gap 1, opp_overlap 1678184 1678212, overlap 1678184 GAACAATCAATGAAA TAATAACAAAAAATAAGAGGTAAGA ATTT TCTTACCTCTTATTTTTTACT-TTA AGAAACTTTTTTAAG TERM 2328 1678184 - 1678211 + T 100 -14.4 -5.37593 | opp_overlap 1678171 1678184 AATAATAACAAAAAA TAAGAGGTAAGA ATTT TCTTACCTCTTA TTTTTTACTTTAAGA TERM 2329 1678211 - 1678184 - T 100 -14.4 -5.70522 | opp_overlap 1678184, overlap 1678171 AATAATAACAAAAAA TAAGAGGTAAGA ATTT TCTTACCTCTTA TTTTTTACTTTAAGA CPE1424 1678661 - 1678221 - | hypothetical protein CPE1425 1679308 - 1678661 - | pyrrolidone-carboxylate peptidase CPE1426 1680267 - 1679338 - | hypothetical protein TERM 2330 1679952 - 1679974 + g 72 -5 -4.75776 | CTATTACAATTGAAG GTAAAAAAAT CTT ATTTTTTAAC TTTTTAGCTTGCATT CPE1427 1680960 - 1680280 - | hypothetical protein TERM 2331 1681143 - 1681186 + r 71 -5.4 -4.58419 | opp_overlap 1681147, overlap 1681147 1681150 ATTTAAAATTTCATA AAAATAAGGACCATAGATTT AATT AAACCTATGGTCCTTATAAA TTTATTATATTTTAT TERM 2332 1681147 - 1681182 + r 100 -15 -2.80197 | opp_overlap 1681147, overlap 1681143 1681150 AAAATTTCATAAAAA TAAGGACCATAGATTT AATT AAACCTATGGTCCTTA TAAATTTATTATATT TERM 2333 1681182 - 1681147 - R 100 -17.2 -4.90296 | opp_overlap 1681143 1681147 1681150 AAAATTTCATAAAAA TAAGGACCATAGATTT AATT AAACCTATGGTCCTTA TAAATTTATTATATT TERM 2334 1681150 - 1681179 + r 95 -12.3 -3.52836 | opp_overlap 1681147, overlap 1681147 1681143 ATTTCATAAAAATAA GGACCATAGATTT AATT AAACCTATGGTCC TTATAAATTTATTAT clpB 1683798 - 1681198 - | clpB protein TERM 2335 1685308 - 1685282 - g 77 -8.2 -3.74762 | opp_overlap 1685287 1685290, overlap 1685287 AAGAGGTATCAATAA TAAAAGAAGATA TTT TATCTTCTTTAA ATAAGGCATTCTTAG TERM 2336 1685303 - 1685287 - g 90 -8.1 -4.92757 | opp_overlap 1685287 1685290, overlap 1685282 GTATCAATAATAAAA GAAGATA TTT TATCTTC TTTAAATAAGGCATT TERM 2337 1685287 - 1685303 + G 74 -8.1 -3.65199 | opp_overlap 1685282 1685287, overlap 1685290 GTATCAATAATAAAA GAAGATA TTT TATCTTC TTTAAATAAGGCATT CPE1429 1684114 - 1685655 + | hypothetical protein clsD 1685736 - 1687166 + | cardiolipin synthase TERM 2338 1687195 - 1687172 - T 100 -11.2 -4.91712 | opp_overlap 1687172 TTTAATGTAGAAAAA TACAGTGTAT GATA ATACACTGTA TTTTTTATTAATAAT TERM 2339 1687172 - 1687195 + T 100 -11.2 -5.52023 | opp_overlap 1687172 TTTAATGTAGAAAAA TACAGTGTAT GATA ATACACTGTA TTTTTTATTAATAAT CPE1431 1688949 - 1687324 - | FAD flavoprotein oxidase hemL 1690433 - 1689150 - | glutamate-1-semialdehyde aminotransferase hemB 1691456 - 1690491 - | delta-aminolevulinic acid dehydratase hemX 1692991 - 1691513 - | uroporphyrinogen-III methyltransferase/synthase TERM 2340 1691571 - 1691583 + g 70 -4.1 -4.90013 | opp_overlap 1691571 AATCCATCTCCACAA TGTGT TTT GCACA TTTTTCCTTCAATTC TERM 2341 1692258 - 1692274 + g 75 -4.5 -5.01811 | opp_overlap 1692269, overlap 1692259 1692269 CCAAATAGAGGTAAT TTTTCAT ACC ATGAAAG TTTTTCATTTAATGA TERM 2342 1692412 - 1692423 + g 70 -5.8 -4.24623 | TTCCTCTCATTACTA CTCC ACAA GGAG TTTCTATATCTTTAC hemC 1693875 - 1693000 - | porphobilinogen deaminase TERM 2343 1693655 - 1693665 + g 74 -6.8 -4.32678 | opp_overlap 1693654 TTCATACTATGAACT GCTC CAT GAGC TTCTTTATTTAAAAG CPE1436 1694595 - 1693933 - | precorrin-2 dehydrogenase hemA 1695761 - 1694559 - | glutamyl-tRNA reductase TERM 2344 1694685 - 1694697 + gr 74 -6.3 -4.51196 | TTTTATCATTCTTTC TGCTA ATT TAGCA TTTTCTCCATTTCCC TERM 2345 1695940 - 1695911 - R 100 -10.9 -4.10781 | opp_overlap 1695916, overlap 1695916 AATAACTTATATAAA TAAAAGCACTCTA TAAA TAGAGTGCTTTTT ATTAGACGCTGATTA TERM 2346 1695935 - 1695916 - R 100 -10.8 -5.05113 | opp_overlap 1695916, overlap 1695911 CTTATATAAATAAAA GCACTCTA TAAA TAGAGTGC TTTTTATTAGACGCT TERM 2347 1695916 - 1695935 + r 100 -10.8 -5.06816 | opp_overlap 1695916 1695911 CTTATATAAATAAAA GCACTCTA TAAA TAGAGTGC TTTTTATTAGACGCT asrC 1697157 - 1696177 - | anaerobic sulfite reductase subunit C asrB 1697962 - 1697171 - | anaerobic sulfite reductase subunit B asrA 1698971 - 1697955 - | anaerobic sulfite reductase subunit A TERM 2348 1698770 - 1698782 + g 70 -6.3 -4.0371 | AAGTTTGAGTTATTG GAAGT AAA ACTTC TTTATATGAGAAATC CPE1441 1699903 - 1699211 - | Crp/Fnr family transcriptional regulator nirC 1700918 - 1700121 - | nitrite transporter TERM 2349 1701064 - 1701044 - R 70 -7.1 -3.76065 | opp_overlap 1701044 1701046, overlap 1701040 TTAATAATAAATCAA TATTTTTTA CTA TAAAAAATA TGATGTATCAAAACT CPE1443 1701746 - 1701126 - | hypothetical protein CPE1444 1702005 - 1701724 - | GIY-YIG domain protein TERM 2350 1702176 - 1702166 - H 70 -4 -5.1244 | opp_overlap 1702166 1702171, overlap 1702160 TTATTAATATAAAAA TCTT TTT AAGA ATTAATTTTATTAAA CPE1445 1702268 - 1704328 + | AraC family transcriptional regulator TERM 2351 1704645 - 1704621 - T 100 -14.5 -4.43864 | opp_overlap 1704621 AAATATATATGAAAA GAGCTAGAATT TAA AATTCTAGCTC TTCTTTCATTTTAAA TERM 2352 1704621 - 1704645 + T 100 -14.5 -4.21465 | opp_overlap 1704621 AAATATATATGAAAA GAGCTAGAATT TAA AATTCTAGCTC TTCTTTCATTTTAAA CPE1446 1706057 - 1704792 - | hypothetical protein TERM 2353 1705467 - 1705482 + g 74 -3.3 -5.36441 | TCTGTAATTACATAT TGCTA AAGCTG TAGCA TTTTTTATATAAAGC CPE1447 1706826 - 1706074 - | hypothetical protein CPE1448 1707375 - 1706848 - | transcriptional regulator TERM 2354 1707020 - 1707033 + g 70 -5.3 -4.68124 | opp_overlap 1707007 ATCTCAGCCTTTAAT GCTAA GTTT TTAGC TTTTCTATATATTAG TERM 2355 1707640 - 1707668 + r 72 -9 -2.66602 | opp_overlap 1707647, overlap 1707647 TTTCTATATATATAC AAAAAAAGCAGC CTTAA GCTGCTTTTTTA TAAGTTATTCCATCC TERM 2356 1707647 - 1707661 + r 90 -7.1 -5.3236 | opp_overlap 1707647, overlap 1707640 ATATATACAAAAAAA GCAGC CTTAA GCTGC TTTTTTATAAGTTAT TERM 2357 1707661 - 1707647 - R 100 -7.8 -5.77988 | opp_overlap 1707647 1707640 ATATATACAAAAAAA GCAGCC TTA AGCTGC TTTTTTATAAGTTAT CPE1449 1707834 - 1707673 - | hypothetical protein CPE1450 1708542 - 1707913 - | ribonuclease H-related protein CPE1451 1709529 - 1708558 - | hypothetical protein TERM 2358 1709636 - 1709609 - R 100 -7.8 -5.53288 | opp_overlap 1709610, overlap 1709610 TTGAAGGTAAAAAAA CTCCTCTGCCTT ATTT AAAACAGAGGAA TTTTTTTATTTTCTT TERM 2359 1709635 - 1709610 - R 81 -9.1 -3.90888 | opp_overlap 1709610, overlap 1709609 TGAAGGTAAAAAAAC TCCTCTGCCTT ATTT AAAACAGAGGA ATTTTTTTATTTTCT CPE1452 1710670 - 1709642 - | rhomboid family protein pepF 1712487 - 1710688 - | oligoendopeptidase F TERM 2360 1711590 - 1711605 + g 78 -3.3 -5.52023 | CATACATATGAATTT CTTCT AAGTTA AGAAG TTTTTTCTTAATCCT TERM 2361 1712459 - 1712469 + g 72 -4 -5.05782 | TCTGGAATTTCATCT CTTA TTC TAAG TTTTTTGACCTCACT CPE1454 1712906 - 1712508 - | hypothetical protein TERM 2362 1713106 - 1713119 + G 80 -2.4 -5.68489 | TAAGAAGACTTATTT TAGG AGTATC CCTA TTTTTTATTATTATA CPE1455 1713075 - 1713410 + | hypothetical protein TERM 2363 1713427 - 1713413 - f 75 -7.2 -4.30448 | opp_overlap 1713413 1713412 1713408 AAAGCTAACTTAAAA TGCAAA TTA TTTGCA CTTGATTTAAAATCC CPE1456 1713483 - 1714151 + | ABC transporter TERM 2364 1714714 - 1714728 + G 79 -7.2 -4.3665 | opp_overlap 1714714 1714716 ATATTTTTACAATTA TAGTAG GAG CTACTA TTTCTGTTTCAATTA TERM 2365 1714829 - 1714815 - g 86 -7.2 -5.16572 | opp_overlap 1714814 1714808 1714815 ATGCAATTTAAAAAA GGATTT ACT AAATCC CTTATTATTTCAATG CPE1457 1714170 - 1714979 + | ABC transporter TERM 2366 1714984 - 1714974 - T 76 -2.6 -5.88197 | TTAAATAGAAAAAAA TTAT AAT ATAA GTAAAAATGGGTTGT CPE1458 1715153 - 1714974 - | hypothetical protein CPE1459 1716529 - 1715138 - | hypothetical protein TERM 2367 1716615 - 1716595 - R 70 -7.1 -3.83323 | opp_overlap 1716579 1716597 1716599 TTTATATAAGCTAAA TATATAAAA TTA TTTTATATA TAATAATTTAAATTT TERM 2368 1716703 - 1716658 - R 93 -10.1 -3.87869 | opp_overlap 1716643 1716658 1716657, overlap 1716662 TTAATTTCTTATAAA TTAATTTAAGTTTTAGATATG ATAA CATATCTAAAACCTAAATATA CCTCTGTATTTTAAA TERM 2369 1716699 - 1716662 - R 100 -15.3 -3.6053 | opp_overlap 1716658 1716657, overlap 1716658 TTTCTTATAAATTAA TTTAAGTTTTAGATATG ATAA CATATCTAAAACCTAAA TATACCTCTGTATTT CPE1460 1718226 - 1716808 - | hypothetical protein CPE1461 1719232 - 1718309 - | hypothetical protein TERM 2370 1719302 - 1719320 + r 73 -3.2 -5.49579 | AAAAATTTTAGTTTT TATTAAGA TTT TCTTTATA TTTTCTTTTTTGTAA TERM 2371 1719398 - 1719359 - R 100 -11.8 -5.83226 | opp_overlap 1719368 AATTTAATAAAAAAA GCTATAAAATAATGAATA TTTT TATTCACTACTTCATAGC CTATAATTTATTATT TERM 2372 1719477 - 1719442 - R 73 -7.2 -4.12652 | opp_overlap 1719440 1719469, overlap 1719440 ATTATAAATAAAATA TCAAAATTATAAATTT TCAT ATACTTATAATTTTGA AGTAAATATTCTATT TERM 2373 1719469 - 1719501 + r 79 -3.7 -5.70522 | opp_overlap 1719442 ATTTTCATATACTTA TAATTTTGAAGTAAA TAT TCTATTTTAAAATTA TTTTTTCTTATTATT furR 1719909 - 1719499 - | FUR family transcriptional regulator TERM 2374 1720100 - 1720051 - R 100 -13.3 -3.53019 | opp_overlap 1720056, overlap 1720056 TTATAAATTGAAATA CAAAAGGATATATTAAAATTGCA TATT TGCAACTATAATATATCCTTTTT ATAATTTCATTTTTT TERM 2375 1720095 - 1720056 - R 100 -13.2 -4.81359 | opp_overlap 1720056, overlap 1720051 AATTGAAATACAAAA GGATATATTAAAATTGCA TATT TGCAACTATAATATATCC TTTTTATAATTTCAT TERM 2376 1720056 - 1720095 + r 100 -11 -5.05228 | opp_overlap 1720051 1720056 AATTGAAATACAAAA GGATATATTAAAATTGCA TATT TGCAACTATAATATATCC TTTTTATAATTTCAT CPE1463 1721028 - 1720201 - | PTS system protein CPE1464 1721834 - 1721028 - | PTS system protein CPE1465 1722486 - 1721989 - | PTS system protein CPE1466 1723060 - 1722641 - | PTS system protein TERM 2377 1722816 - 1722838 + g 70 -4.1 -4.86621 | ATATTTTCCTTTTTA GCAGTTGCA ACTTG TGTTACTGC TTTTTGATTAACACT TERM 2378 1723671 - 1723681 + G 71 -6.8 -3.87576 | opp_overlap 1723671 AGATTTAAAAATTCA CCAG CCT CTGG TTTAGGTTCTTGTAG TERM 2379 1724628 - 1724649 + G 81 -8.1 -4.05816 | gap 1 TTAATTAGCGATTTT GAGGATAGAG ATT CTCT-TCCTC TTTATCATAGTTTTG pfk 1723470 - 1724672 + | 6-phosphofructokinase TERM 2380 1724733 - 1724703 - T 100 -14.3 -3.13728 | opp_overlap 1724703 1724708, overlap 1724708 ATTACCTACATTTAA TAAAAGACATGCA TTTTC TGCATGTCTTTTA TTTTTCTTTAAGAAC TERM 2381 1724703 - 1724733 + T 100 -14.3 -5.27335 | opp_overlap 1724703 1724708, overlap 1724708 ATTACCTACATTTAA TAAAAGACATGCA TTTTC TGCATGTCTTTTA TTTTTCTTTAAGAAC TERM 2382 1724728 - 1724708 - T 100 -9.8 -4.70169 | opp_overlap 1724708 1724703, overlap 1724703 CTACATTTAATAAAA GACATGCA TTTTC TGCATGTC TTTTATTTTTCTTTA TERM 2383 1724708 - 1724728 + T 100 -9.8 -5.48028 | opp_overlap 1724703 1724708, overlap 1724703 CTACATTTAATAAAA GACATGCA TTTTC TGCATGTC TTTTATTTTTCTTTA CPE1468 1725096 - 1724731 - | hypothetical protein TERM 2384 1725346 - 1725301 - R 100 -10.2 -5.71712 | opp_overlap 1725301 1725336, overlap 1725336 TTTTACATAAAAAAA TTCTAAATAAATTCTTATAT ATGAAA ACTTAAGAATTTATTTAGAA TAAATTTTATAGTCT CPE1469 1726639 - 1725353 - | aminotransferase, class V TERM 2385 1728207 - 1728182 - g 70 -5.5 -4.22041 | overlap 1728178 AAAGTGTAAGATAAA CCTTTTAAAAC TTAT GCTTTCAAAGG CCAATCTTCTTCTCT TERM 2386 1728530 - 1728510 - g 93 -4.8 -6.07374 | gap 1 AGAAAAAAGAAAAAA TCT-GCTGA AAAA TCAGCTAGA GCTTTAAGAGCTCAA TERM 2387 1728603 - 1728588 - g 72 -6.2 -4.24569 | CAAAAAGAAGAAGAA CTTGAA AAAC TTCAAG GAATGCTTTGTACTG CPE1470 1726809 - 1728740 + | prbable ABC transporter TERM 2388 1728825 - 1728779 - T 100 -12.6 -5.2166 | opp_overlap 1728779 TAACAATCTAAAAAA GAGAATGCATGGAAAGTTCTTT TTT AAAAAATTTCCCATGTATTCTC TTTTAAATTGAACTT TERM 2389 1728779 - 1728825 + T 100 -12.6 -4.28432 | opp_overlap 1728779 TAACAATCTAAAAAA GAGAATGCATGGAAAGTTCTTT TTT AAAAAATTTCCCATGTATTCTC TTTTAAATTGAACTT TERM 2390 1728891 - 1728849 - T 100 -15.4 -4.94058 | opp_overlap 1728849 TGAACTTAAAGAAAA TAGTGTATTAAAATAAATTT CTT AAAGTTATTTTAATACACTA TTTCTTTATTTATCT TERM 2391 1728849 - 1728891 + T 100 -15.4 -4.84602 | opp_overlap 1728849 TGAACTTAAAGAAAA TAGTGTATTAAAATAAATTT CTT AAAGTTATTTTAATACACTA TTTCTTTATTTATCT dut 1729369 - 1728905 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 2392 1729455 - 1729404 - R 79 -10 -2.72739 | overlap 1729403 1729441 TTTAATCTATATAAT TTTTTAGAAATAAAATTAAACTAT AGCT ATTATATAATTTTATTTCTAAAAA TTAAAGCCCACAGAA TERM 2393 1729488 - 1729456 - R 93 -9.4 -4.59773 | gap 1, opp_overlap 1729461, overlap 1729461 TTTTATTTCTAAAAA TTA-AAGCCCACAGA ATAT TCTGTGAGCTTCTAA ATAATTTTATTCTAA TERM 2394 1729482 - 1729461 - R 100 -10.9 -4.32046 | opp_overlap 1729461, overlap 1729456 TTTCTAAAAATTAAA GCCCACAGA ATAT TCTGTGAGC TTCTAAATAATTTTA TERM 2395 1729461 - 1729482 + r 77 -8.7 -3.42124 | opp_overlap 1729456 1729461 TTTCTAAAAATTAAA GCCCACAGA ATAT TCTGTGAGC TTCTAAATAATTTTA CPE1472 1730094 - 1729504 - | hypothetical protein TERM 2396 1729952 - 1729984 + g 78 -9.3 -3.32268 | opp_overlap 1729952, overlap 1729928 1729925 1729940 1729953 1729958 TGATGATTGCAATGA TCATGATGATCACAA TTA TTGTGATGGTCATGG TTATCACAGTGATTA TERM 2397 1729953 - 1729983 + g 78 -10.6 -2.59039 | opp_overlap 1729952, overlap 1729928 1729925 1729952 1729940 1729958 GATGATTGCAATGAT CATGATGATCACAA TTA TTGTGATGGTCATG GTTATCACAGTGATT CPE1473 1730734 - 1730180 - | hypothetical protein TERM 2398 1730944 - 1730928 - H 74 -8.1 -3.32727 | opp_overlap 1730931 GTAATATGATAGTAA GTAGTTT CGA AAACTAC TTGAAAACTTTTTCC hlyC 1730973 - 1731620 + | hemolysin III TERM 2399 1731627 - 1731601 - T 72 -8.3 -3.27022 | opp_overlap 1731624 GTCACTTTATATCAA TTTTCTTTTAT CTACT ATAAAAGAAAA GAAAGGATAGTAATA TERM 2400 1731624 - 1731673 + T 95 -13.3 -3.02109 | opp_overlap 1731601 1731628 1731632, overlap 1731632 TATCTACTATAAAAG AAAAGAAAGGATAGTAATACTAA AAAA TAAGTATTACTATCCTTTTTTTA TATATCTGAACTTTT TERM 2401 1731669 - 1731628 - T 100 -11.9 -5.20781 | opp_overlap 1731624 1731632, overlap 1731632 TACTATAAAAGAAAA GAAAGGATAGTAATACTAA AAAA TAAGTATTACTATCCTTTT TTTATATATCTGAAC TERM 2402 1731632 - 1731665 + T 100 -12.7 -5.77988 | opp_overlap 1731628 1731632, overlap 1731624 ATAAAAGAAAAGAAA GGATAGTAATACTAA AAAA TAAGTATTACTATCC TTTTTTTATATATCT TERM 2403 1731665 - 1731632 - T 100 -12.7 -5.06411 | opp_overlap 1731632 1731624, overlap 1731628 ATAAAAGAAAAGAAA GGATAGTAATACTAA AAAA TAAGTATTACTATCC TTTTTTTATATATCT CPE1475 1732555 - 1731671 - | LysR family transcriptional regulator TERM 2404 1731725 - 1731704 - G 74 -7.5 -3.92641 | opp_overlap 1731703 1731706 AATTTTATCTATAAA TATTTCTAA GTTT TTAGAAATA AATTTATCCTTATGA CPE1476 1732851 - 1732567 - | hypothetical protein TERM 2405 1732628 - 1732638 + g 74 -5.4 -4.98461 | CCATCATCTTGCATA TCAG CCT CTGA TTTCTTTTCTTCTTT CPE1477 1733027 - 1733743 + | polysaccharide deacetylase family protein TERM 2406 1733734 - 1733762 + T 100 -12 -4.43844 | opp_overlap 1733734, overlap 1733738 TTATAGATTAAAAAA TAAATGTTGAGA TTATC TCTCAACATTTA TTTTGTCCCTAATGA TERM 2407 1733762 - 1733734 - T 100 -12 -5.24989 | opp_overlap 1733734 1733738 TTATAGATTAAAAAA TAAATGTTGAGA TTATC TCTCAACATTTA TTTTGTCCCTAATGA TERM 2408 1733738 - 1733758 + T 88 -8.4 -4.7878 | opp_overlap 1733734, overlap 1733734 AGATTAAAAAATAAA TGTTGAGA TTATC TCTCAACA TTTATTTTGTCCCTA CPE1478 1734296 - 1733760 - | hypothetical protein TERM 2409 1734203 - 1734187 - G 71 -2.3 -5.40072 | opp_overlap 1734187 TCCTTCTTAAAAAAA TAAAGAA TAG TTCTTTG AATTTTTTCTTTTAA CPE1479 1735050 - 1734415 - | hypothetical protein CPE1480 1735270 - 1736925 + | sulfate permease, SulP family TERM 2410 1736959 - 1736928 - T 100 -11.8 -4.27316 | opp_overlap 1736933, overlap 1736914 1736933 TTCTTTAATTTAAAA TAAAAGACACTAGT AATT ACTAGTGTCTTTTT CATTTTCTATTCTTC TERM 2411 1736933 - 1736954 + T 100 -11.7 -5.15526 | opp_overlap 1736914 1736933 1736928 TAATTTAAAATAAAA GACACTAGT AATT ACTAGTGTC TTTTTCATTTTCTAT TERM 2412 1736954 - 1736933 - T 100 -11.7 -5.13343 | opp_overlap 1736933, overlap 1736914 1736928 TAATTTAAAATAAAA GACACTAGT AATT ACTAGTGTC TTTTTCATTTTCTAT CPE1481 1737118 - 1736966 - | hypothetical protein CPE1482 1738160 - 1737195 - | sugar kinase TERM 2413 1738063 - 1738089 + g 73 -8.8 -3.18264 | TTTACATGACCTGGT GTTGAGTTATAG GGT CTATAACTCGCC TTACTAAATCCAAAC CPE1483 1738394 - 1738200 - | hypothetical protein TERM 2414 1738607 - 1738658 + r 90 -6.2 -5.85244 | gap 1, opp_overlap 1738618 1738624, overlap 1738615 1738624 CTATATTTACTTCTT TGCAT-TTACAATAAAAACCGTTGA TAA TCAACGGTTTTTATTGTTTTATATA TTTTTTCTTTTACTT TERM 2415 1738615 - 1738649 + r 100 -20.4 -4.84582 | opp_overlap 1738618 1738624, overlap 1738607 1738624 ACTTCTTTGCATTTA CAATAAAAACCGTTGA TAA TCAACGGTTTTTATTG TTTTATATATTTTTT TERM 2416 1738646 - 1738618 - R 100 -16.3 -3.35679 | opp_overlap 1738615 1738607 1738624, overlap 1738624 TCTTTGCATTTACAA TAAAAACCGTTGA TAA TCAACGGTTTTTA TTGTTTTATATATTT TERM 2417 1738624 - 1738640 + r 100 -10.9 -5.47964 | opp_overlap 1738624 1738618, overlap 1738615 1738607 CATTTACAATAAAAA CCGTTGA TAA TCAACGG TTTTTATTGTTTTAT TERM 2418 1738640 - 1738624 - R 100 -10.9 -5.20333 | opp_overlap 1738615 1738607 1738624, overlap 1738618 CATTTACAATAAAAA CCGTTGA TAA TCAACGG TTTTTATTGTTTTAT CPE1484 1739980 - 1738652 - | MATE efflux family protein CPE1485 1740687 - 1740001 - | ABC transporter CPE1486 1741444 - 1740689 - | ABC transporter TERM 2419 1741356 - 1741326 - GR 90 -9.9 -3.71649 | gap 1, opp_overlap 1741328 CCCTTAAACGTTAAA TAGGGAG-AAGGTA ATAT TACCTCACTCCCTA TAATCATACTAGCTA CPE1487 1742423 - 1741419 - | hypothetical protein CPE1488 1742855 - 1742670 - | hypothetical protein TERM 2420 1743030 - 1742975 - R 85 -8.6 -4.55826 | opp_overlap 1742978 1743027, overlap 1742978 1743027 TTTAAAATACTAAAA TAAGCTTTGGTGGAAAATAACTTTCA TCTC TAAAAATTATTCTCATCCAAAGCTTT TTTATTAAAAGTAAA TERM 2421 1743027 - 1742978 - R 95 -10.3 -4.36348 | opp_overlap 1742978, overlap 1742975 AAAATACTAAAATAA GCTTTGGTGGAAAATAACTTTCA TCTC TAAAAATTATTCTCATCCAAAGC TTTTTTATTAAAAGT TERM 2422 1742978 - 1743027 + r 75 -3.7 -5.45652 | opp_overlap 1742975 1742978 AAAATACTAAAATAA GCTTTGGTGGAAAATAACTTTCA TCTC TAAAAATTATTCTCATCCAAAGC TTTTTTATTAAAAGT CPE1489 1743917 - 1743060 - | hypothetical protein CPE1490 1744797 - 1744021 - | hypothetical protein CPE1491 1745032 - 1745454 + | hypothetical protein CPE1492 1746181 - 1745657 - | hypothetical protein CPE1493 1746761 - 1746252 - | hypothetical protein TERM 2423 1746626 - 1746640 + g 80 -10 -3.28912 | opp_overlap 1746626 CTTGTCCTGCAATTA TGCCAG CCG CTGGCA TTACTATACCTGTAG TERM 2424 1746640 - 1746626 - G 76 -10 -2.70932 | opp_overlap 1746626 CTTGTCCTGCAATTA TGCCAG CCG CTGGCA TTACTATACCTGTAG TERM 2425 1746977 - 1746947 - R 74 -8.6 -3.45033 | opp_overlap 1746941, overlap 1746941 TATAACCTATTATAA TTTTACAATTATAA ATT TAATAATTGTAAAA ACTCATTTATAAGTT CPE1494 1747856 - 1747023 - | PP-loop family protein CPE1495 1748061 - 1747807 - | hypothetical protein TERM 2426 1748090 - 1748104 + H 73 -5.8 -4.82548 | CTATATAAAACTCTT TTGTTA TTA TAACAA TTTTATCTCTTTTTG TERM 2427 1748470 - 1748447 - g 74 -6.2 -4.41348 | overlap 1748443 CTTCTCTTAAAGAAA TTTTCAAAGA GTTC TCTTTAAAAA ATTCACTAGATATAT CPE1496 1748260 - 1748529 + | hypothetical protein CPE1497 1748546 - 1749898 + | hypothetical protein CPE1498 1750614 - 1750111 - | hypothetical protein TERM 2428 1750725 - 1750684 - R 100 -9.9 -4.96468 | opp_overlap 1750691 GAAAGGTAAATAAAA CCCTAAATATATTATTTTA AATT TAAAACAATATATTTAAAG CTAAAAATAATTGCA TERM 2429 1750767 - 1750750 - R 100 -9.9 -5.64421 | ATTGCAAATAAAAAA CCGTAGA AAAT TCTACGG TTAAAAGCACACAAA comEC 1751814 - 1750939 - | late competence protein TERM 2430 1751791 - 1751801 + g 72 -2.6 -5.4477 | TGTAACTGTACTTAT TATT GCT AATA TTTTTTTAAACATTT TERM 2431 1752009 - 1751951 - R 90 -10.2 -3.71378 | gap 1, opp_overlap 1751966, overlap 1751966 TATAGTCAACAAATA TATAAAT-AACAAAAAGAAGCGTAGAT TTTTTT ATCTAGGCTTCTTTTTCTTGATTTATA GGAATGAGCATTTTT TERM 2432 1751993 - 1751966 - R 90 -7.1 -5.42164 | opp_overlap 1751966, overlap 1751951 TATAAATAACAAAAA GAAGCGTAGAT TTTTTT ATCTAGGCTTC TTTTTCTTGATTTAT TERM 2433 1751966 - 1751993 + r 87 -7.1 -5.25906 | opp_overlap 1751966 1751951 TATAAATAACAAAAA GAAGCGTAGAT TTTTTT ATCTAGGCTTC TTTTTCTTGATTTAT virS 1753307 - 1751985 - | sensor histidine kinase VirS TERM 2434 1753183 - 1753197 + g 85 -2.9 -5.92399 | overlap 1753176 ATTACAATGAAGGAG TAAAC TTCTT GTTTA TTTTTTCTTTTCTTA virR 1754011 - 1753301 - | DNA-binding response regulator, LytTr family TERM 2435 1753876 - 1753852 - G 74 -2.1 -5.52909 | opp_overlap 1753855 1753857, overlap 1753855 GAATATCTAAAAAAA GCATGTCCAAA TTT TCTGGATATTC CCTTAATAGATCCTC TERM 2436 1754143 - 1754120 - R 78 -8.2 -3.99779 | opp_overlap 1754123, overlap 1754123 TAAAATGTAATTAAA CAAGACCTAG AAAA CCAGGTCTTA TAAAAATCAATCTAA TERM 2437 1754140 - 1754123 - R 77 -7.7 -4.09923 | opp_overlap 1754123, overlap 1754120 AATGTAATTAAACAA GACCTAG AAAA CCAGGTC TTATAAAAATCAATC CPE1502 1755163 - 1754150 - | hypothetical protein TERM 2438 1754602 - 1754614 + g 70 -4.1 -4.98103 | CTTTTAAAGAATCCT CTTGA CCT TCAGG TTTTATATTTTCTTC TERM 2439 1755219 - 1755170 - R 100 -11.2 -4.53303 | opp_overlap 1755172 TATCTTCATATAAAA TACCTCCTAAAAATATTTATCT TTCACT ATATAAATATTTTCAAGAGGTA AATTAAGTTGTTTAA CPE1503 1755547 - 1755260 - | hypothetical protein TERM 2440 1755764 - 1755734 - R 100 -12 -4.52505 | opp_overlap 1755739 1755740 1755742, overlap 1755740 AATAAAAATTTAAAA TAAAAAGACAGGCC TAA AGCCTGTCCTTTCA TCGTAGTTAATTTAA TERM 2441 1755740 - 1755758 + r 82 -10.3 -2.88737 | opp_overlap 1755740 1755734, overlap 1755739 1755742 AATTTAAAATAAAAA GACAGGC CTAAA GCCTGTC CTTTCATCGTAGTTA TERM 2442 1755758 - 1755740 - R 100 -11 -5.49568 | opp_overlap 1755739 1755740 1755742, overlap 1755734 AATTTAAAATAAAAA GACAGGCC TAA AGCCTGTC CTTTCATCGTAGTTA CPE1504 1756784 - 1755771 - | hypothetical protein uraA 1758508 - 1757210 - | uracil transporter TERM 2443 1757831 - 1757842 + g 73 -5.8 -4.53034 | opp_overlap 1757831 TTGTGGCAATACAAA GAGG CTTG CCTC TTTTACTTGTGTAAA CPE1506 1758696 - 1760279 + | ABC transporter TERM 2444 1760280 - 1760327 + T 100 -15.2 -4.4715 | opp_overlap 1760280 1760286, overlap 1760284 1760286 TTAGAAACTAAGTAA TAAAAAGAGCGTGTGTTGAAAT TTTT ATTTCAATACACGCTCTCTTCA TTTTATACATTAGCA TERM 2445 1760327 - 1760280 - T 100 -17.4 -3.52317 | opp_overlap 1760280 1760284 1760286, overlap 1760286 TTAGAAACTAAGTAA TAAAAAGAGCGTGTGTTGAAAT TTTT ATTTCAATACACGCTCTCTTCA TTTTATACATTAGCA TERM 2446 1760284 - 1760323 + T 100 -16 -3.76789 | opp_overlap 1760280 1760286, overlap 1760280 1760286 AAACTAAGTAATAAA AAGAGCGTGTGTTGAAAT TTTT ATTTCAATACACGCTCTC TTCATTTTATACATT TERM 2447 1760286 - 1760321 + T 100 -18.6 -3.45405 | opp_overlap 1760280 1760286, overlap 1760284 1760280 ACTAAGTAATAAAAA GAGCGTGTGTTGAAAT TTTT ATTTCAATACACGCTC TCTTCATTTTATACA TERM 2448 1760321 - 1760286 - T 100 -16.4 -5.20534 | opp_overlap 1760286 1760284 1760280, overlap 1760280 ACTAAGTAATAAAAA GAGCGTGTGTTGAAAT TTTT ATTTCAATACACGCTC TCTTCATTTTATACA CPE1507 1761292 - 1760330 - | endo-1,4-beta-xylanase TERM 2449 1761501 - 1761519 + r 73 -7.6 -3.68569 | CTCTATCCTTTTTTG CTTATTTA ATG TAAATAAG TTATTAAATGAATAG topB 1763862 - 1761676 - | DNA topoisomerase III TERM 2450 1763825 - 1763835 + g 74 -5.4 -4.93296 | TTGGCAATTTCTCTA CCTA CAC TAGG TTTTTCTGCTAGTAC CPE1509 1765377 - 1763959 - | hypothetical protein TERM 2451 1764292 - 1764280 - G 86 -2.7 -6.11243 | overlap 1764282 AGTTAATAAAAAAAA TCCTA TAC TAGAA TATAGCGCAACTTGT TERM 2452 1764980 - 1764990 + g 72 -4 -5.0917 | AAGTTTCCATAAAGG GATT CTA AATC TTTCTTTTTTAATAC CPE1510 1765854 - 1765387 - | hypothetical protein TERM 2453 1765903 - 1765879 - R 100 -10.2 -6.09888 | CTTTAATAAAAAAAA CCTATAAGAA AACCA TTCTTATAGG CTACCCGTTGCCAAA TERM 2454 1766110 - 1766127 + r 81 -7.1 -4.87133 | TGCTTGGTTTTCGCT TCTAAGT ACGC ACTTAGA TTTTCTTTAAACACT CPE1511 1766667 - 1766269 - | hypothetical protein CPE1512 1770156 - 1766875 - | sensor histidine kinase/response regulator TERM 2455 1769052 - 1769071 + g 76 -6.6 -4.48987 | TATAAATTCCACTCA TACTATTA TCAC TAATAGTA TTTTCCTTATCAGGC CPE1513 1771338 - 1770238 - | hypothetical protein argI 1772720 - 1771353 - | AlgI-related protein TERM 2456 1772757 - 1772773 + r 90 -6.6 -5.66338 | opp_overlap 1772759 ATTTTATATTTCTAA GAGACT TTAAT AGTCTC TTTTTTATTATCTTT CPE1515 1773445 - 1772948 - | putative lipoprotein TERM 2457 1773678 - 1773651 - R 100 -8.6 -6.23545 | gap 1, opp_overlap 1773650 1773651 TTTAAATAAAAAAAA GCACCAAAAGAAA TGG CTTC-TTTGGTGC ATTATAATATATATT CPE1516 1774920 - 1773697 - | ATP-dependent RNA helicase, DEAD/DEAH box family CPE1517 1775249 - 1774938 - | hypothetical protein gdhA 1776904 - 1775558 - | glutamate dehydrogenase TERM 2458 1777040 - 1777072 + r 74 -8.1 -3.37533 | opp_overlap 1777037 1777034, overlap 1777041 TAGCATAAAGTACCA TTTATTAAATAATAA TCT TTAATATTTAATAAA TTGATAATTTTAACA TERM 2459 1777131 - 1777104 - R 82 -8.8 -4.02334 | opp_overlap 1777108, overlap 1777108 GATTTATATTATAAA TAAATATTTTTA ACAT TAAAAATATTTA TAAACATTCTTTTTT TERM 2460 1777394 - 1777338 - R 93 -12.1 -3.17901 | opp_overlap 1777354 1777386, overlap 1777354 ATACTTTTAATTTAA TCTAAAAAATAAAAAAGGTAACTTTAT TTA ATAAAGCTACCTTTTTTATTATCTAAT AACCTTTTGTGGATT TERM 2461 1777354 - 1777378 + r 100 -8.7 -5.60689 | opp_overlap 1777354 1777338 CTAAAAAATAAAAAA GGTAACTTTAT TTA ATAAAGCTACC TTTTTTATTATCTAA TERM 2462 1777378 - 1777354 - R 100 -10.9 -6.04324 | opp_overlap 1777354, overlap 1777338 CTAAAAAATAAAAAA GGTAACTTTAT TTA ATAAAGCTACC TTTTTTATTATCTAA CPE1519 1777880 - 1777386 - | hypothetical protein ilvE 1778114 - 1779139 + | branched-chain amino acid aminotransferase TERM 2463 1779151 - 1779174 + T 80 -6.1 -5.1485 | gap 1, opp_overlap 1779151 ATAATACATAAAAAA GAGAGTGAGT AGTAA ACTC-CTCTC TTTTTCTCTTAATTA TERM 2464 1779174 - 1779151 - T 85 -6.1 -5.48787 | gap 1, opp_overlap 1779151 ATAATACATAAAAAA GAGAGTGAGT AGTAA ACTC-CTCTC TTTTTCTCTTAATTA CPE1521 1779596 - 1779183 - | hypothetical protein CPE1522 1780164 - 1779619 - | hypothetical protein TERM 2465 1780287 - 1780313 + r 88 -12.5 -2.62332 | opp_overlap 1780287, overlap 1780283 TTTTCACCAATTAAA GGCTATGTTTT CACTA AAAACATAGCC TCAATTAATTCATTT TERM 2466 1780313 - 1780287 - R 100 -13.2 -3.95584 | opp_overlap 1780287 1780283 TTTTCACCAATTAAA GGCTATGTTTTC ACT AAAAACATAGCC TCAATTAATTCATTT nagL 1783744 - 1780361 - | hyaluronidase CPE1524 1784103 - 1785029 + | hypothetical protein CPE1525 1786919 - 1785150 - | ABC transporter CPE1526 1788675 - 1786954 - | ABC transporter TERM 2467 1788827 - 1788784 - R 100 -10.6 -6.11229 | gap 1, overlap 1788818 ACTAAAATAAAAAAA CACCTATGTTCCTTAAGCAAA AGC TATGCTTAAAGA-CATAGATG CCCTATAAAATCAAG TERM 2468 1789038 - 1789019 - R 80 -6.4 -5.08601 | TTATTGCAACAAAAA GCACAGCT TCTC AGCCATGC CTTAAAATCTAGAAA CPE1527 1790102 - 1789308 - | hypothetical protein TERM 2469 1790194 - 1790178 - R 88 -5.1 -5.86976 | opp_overlap 1790178 TTACAAAATAAAAAA CACGG AATAAAA CCGTG CTTTCTTATTAATCA CPE1528 1790644 - 1790285 - | hypothetical protein TERM 2470 1791857 - 1791847 - g 76 -5.4 -5.01422 | TGATATAAAAATAAA CTTC TTT GAAG CTCCTCATTACACTA CPE1529 1790912 - 1792249 + | hypothetical protein TERM 2471 1792259 - 1792309 + T 100 -13.1 -4.65969 | opp_overlap 1792268, overlap 1792268 1792303 AAATAAATTTCACTT TTAAAGAAAGGTTAAGTTAAAAT TATTT ATTTTAACTTAACCTTTAATTAA TTTTAATTATTTATT TERM 2472 1792300 - 1792268 - T 100 -13.8 -4.42806 | opp_overlap 1792268 1792259 TCACTTTTAAAGAAA GGTTAAGTTAAAAT TATTT ATTTTAACTTAACC TTTAATTAATTTTAA TERM 2473 1792268 - 1792300 + T 100 -13.8 -4.07675 | opp_overlap 1792268, overlap 1792259 TCACTTTTAAAGAAA GGTTAAGTTAAAAT TATTT ATTTTAACTTAACC TTTAATTAATTTTAA CPE1530 1792732 - 1792316 - | hypothetical protein CPE1531 1793900 - 1792953 - | fructokinase TERM 2474 1793787 - 1793805 + g 70 -4.4 -4.86033 | opp_overlap 1793772 1793771, overlap 1793788 TGCTGCTCCAACATT TGCTGGAG CTC CACCAGCC TTTTTCTCAAAGTTT TERM 2475 1793788 - 1793804 + g 71 -7.9 -3.50535 | opp_overlap 1793772 1793771, overlap 1793787 GCTGCTCCAACATTT GCTGGAG CTC CACCAGC CTTTTTCTCAAAGTT sacA 1795356 - 1793893 - | sucrose-6-P hydrolase CPE1533 1796376 - 1795396 - | sucrose operon repressor TERM 2476 1796501 - 1796474 - R 75 -7 -4.323 | overlap 1796475 1796477 TTGAAATATTTAAAA GCAGGCTCTGTA AAAT CACAGAGCCTAA AAATTATTCTTGTGG TERM 2477 1796500 - 1796475 - R 87 -10.5 -3.18657 | overlap 1796474 1796477 TGAAATATTTAAAAG CAGGCTCTGTA AAAT CACAGAGCCTA AAAATTATTCTTGTG TERM 2478 1796498 - 1796477 - R 90 -10.9 -3.1434 | overlap 1796475 1796474 AAATATTTAAAAGCA GGCTCTGTA AAAT CACAGAGCC TAAAAATTATTCTTG CPE1534 1797857 - 1796505 - | PTS system, sucrose-specific IIBC component TERM 2479 1797533 - 1797553 + g 81 -5.5 -5.31275 | opp_overlap 1797528 1797533 TTATAGGAACGAAAA TATCTCCTA AAG TACGAGATA TTTTTTGTGGTAAAG TERM 2480 1797553 - 1797533 - G 71 -5.5 -4.4773 | opp_overlap 1797533, overlap 1797528 TTATAGGAACGAAAA TATCTCCTA AAG TACGAGATA TTTTTTGTGGTAAAG TERM 2481 1798128 - 1798161 + r 100 -12.7 -5.13016 | opp_overlap 1798128 ATTTAAAATGAAAAA GAATAAGGTTAACCA TTCC TGATTAACCTTATTC TTTTTCATTTTAATT TERM 2482 1798161 - 1798128 - R 100 -14.9 -5.10154 | opp_overlap 1798128 ATTTAAAATGAAAAA GAATAAGGTTAACCA TTCC TGATTAACCTTATTC TTTTTCATTTTAATT CPE1535 1798806 - 1798180 - | hypothetical protein TERM 2483 1799127 - 1799094 - R 100 -7.7 -5.71712 | opp_overlap 1799094 GCTTATATAAAAAAA TTACATAGATTATAA AAAT TCCTAATCTATGTAA TTTTTAAACAAATTT TERM 2484 1799094 - 1799127 + r 71 -5.6 -4.58685 | opp_overlap 1799094 GCTTATATAAAAAAA TTACATAGATTA TAAAAATTCC TAATCTATGTAA TTTTTAAACAAATTT asrC 1800364 - 1799318 - | anaerobic sulfite reductase subunit C asrB 1801168 - 1800377 - | anaerobic sulfite reductase subunit B asrA 1802200 - 1801169 - | anaerobic sulfite reductase subunit A CPE1539 1802460 - 1802870 + | hypothetical protein TERM 2485 1802888 - 1802914 + T 100 -11.1 -5.7827 | opp_overlap 1802888 ATATTAATAAAAAAA GATGGAAATTA ATTTG TAATTTCCATC TTTTTTCTTTATATT TERM 2486 1802914 - 1802888 - T 100 -11.1 -5.85737 | opp_overlap 1802888 ATATTAATAAAAAAA GATGGAAATTA ATTTG TAATTTCCATC TTTTTTCTTTATATT CPE1540 1804152 - 1802968 - | ABC transporter TERM 2487 1803014 - 1802998 - G 70 -8.1 -3.11634 | opp_overlap 1802994 1803000 TTTTATAGGATCTAA CTTACAA GCA TTGTAAG CTGGTATTATTCCAA CPE1541 1804840 - 1804139 - | ABC transporter CPE1542 1805960 - 1804830 - | hypothetical protein TERM 2488 1806117 - 1806081 - R 72 -8.3 -3.17763 | opp_overlap 1806089 1806092, overlap 1806089 TTCATATTTTATTAA TAAAAAAATAAGATAGC AAA ACTATCTTATTCTCCTA AAAGATTTTCTATAC TERM 2489 1806109 - 1806089 - R 100 -7.7 -5.84381 | opp_overlap 1806089 1806092, overlap 1806081 TTATTAATAAAAAAA TAAGATAGC AAA ACTATCTTA TTCTCCTAAAAGATT bioD 1806873 - 1806187 - | dithiobiotin synthetase bioB 1807835 - 1806876 - | biotin synthase TERM 2490 1806978 - 1806990 + g 70 -6.3 -4.0896 | AGTAGCATTTGCTCC TGCTT TAA AAGCA TTTTCACCAAAGTTT bioY 1808408 - 1807854 - | biotin synthase CPE1546 1809885 - 1808794 - | hypothetical protein TERM 2491 1810161 - 1810124 - R 100 -13.7 -4.09509 | opp_overlap 1810127 1810128 1810149, overlap 1810114 1810128 AGTAATTTATATAAA TAAAGCCCTAGCACAAT ATTA ATTGTACTAGGACCTTA GTAATTTAGGTAAAT TERM 2492 1810157 - 1810128 - R 100 -12.3 -4.63044 | opp_overlap 1810128 1810127 1810149, overlap 1810124 ATTTATATAAATAAA GCCCTAGCACAAT ATTA ATTGTACTAGGAC CTTAGTAATTTAGGT spoVK 1813678 - 1810241 - | stage V sporulation protein K TERM 2493 1811700 - 1811712 + g 72 -7.7 -3.55084 | opp_overlap 1811700 1811699, overlap 1811691 ATTTCAGCTACTAAT CTAGC TAT GCTAG TCTTTCCTGTTCCAG fdh 1815722 - 1813734 - | molybdopterin oxidoreductase TERM 2494 1815922 - 1815912 - H 73 -2.6 -5.71983 | opp_overlap 1815886, overlap 1815890 TTAACTATAAAAAAA TAAA TTT TTTA GTAATTAAATTTAGA prs 1816133 - 1817227 + | phosphoribosylpyrophosphate synthetase TERM 2495 1817244 - 1817267 + T 100 -12.5 -5.27399 | opp_overlap 1817244 ATGCTTAATTTAAAA GTGCTCTGC TTTTTT GCAGAGCAC TTTTTTAGTCTATTC TERM 2496 1817267 - 1817244 - T 100 -12.5 -4.27584 | opp_overlap 1817244 ATGCTTAATTTAAAA GTGCTCTGC TTTTTT GCAGAGCAC TTTTTTAGTCTATTC CPE1550 1818338 - 1817277 - | hypothetical protein TERM 2497 1818451 - 1818412 - R 100 -16.8 -3.86684 | opp_overlap 1818412 1818415, overlap 1818415 ATAAGTTACAGCAAA GAAGAGAGCTGATCTTAT TTTT ATAAAATCAACTCTCTTC TTTATATTAAACAAT TERM 2498 1818412 - 1818451 + r 100 -12.4 -4.19177 | opp_overlap 1818412 1818415, overlap 1818415 ATAAGTTACAGCAAA GAAGAGAGCTGATCTTAT TTTT ATAAAATCAACTCTCTTC TTTATATTAAACAAT TERM 2499 1818415 - 1818448 + r 80 -8.3 -4.21773 | opp_overlap 1818415 1818412, overlap 1818412 AGTTACAGCAAAGAA GAGAGCTGATCTTAT TTTT ATAAAATCAACTCTC TTCTTTATATTAAAC TERM 2500 1818448 - 1818415 - R 100 -12.7 -4.05208 | opp_overlap 1818412 1818415, overlap 1818412 AGTTACAGCAAAGAA GAGAGCTGATCTTAT TTTT ATAAAATCAACTCTC TTCTTTATATTAAAC CPE1551 1819538 - 1818549 - | endo-1,4-beta-xylanase TERM 2501 1818606 - 1818621 + g 78 -3.2 -5.59655 | overlap 1818608 ATCTGAAGAATTATT TTCACC TACA GGTGTA TTTTTTATTACTTTA TERM 2502 1818608 - 1818619 + g 71 -5.8 -4.40357 | overlap 1818606 CTGAAGAATTATTTT CACC TACA GGTG TATTTTTTATTACTT TERM 2503 1819696 - 1819664 - R 77 -5.2 -5.39905 | gap 2, opp_overlap 1819664 ATTAAATAAGAAAAA TAGAGCT-A-TATGAA AAT TTCATAATCAGCTCTA TTTTAAACAAGTATC pulA 1821726 - 1819759 - | pullulanase TERM 2504 1819878 - 1819888 + g 72 -5.4 -4.72188 | opp_overlap 1819866 1819877 1819878 TAACTCCCCAAAGAC CCTT AGG AAGG TTTATTTTAACTTCA sipS 1821902 - 1822438 + | signal peptidase I TERM 2505 1822483 - 1822450 - T 82 -9.1 -4.10672 | gap 1, opp_overlap 1822454, overlap 1822454 TTAATTTAAATTAAA CAAACTAGAGAGA-AT AAA ATATCACTCTAGTTTG TCATAAATTTTTAAT CPE1554 1823339 - 1822494 - | putative lipoprotein CPE1555 1823717 - 1823448 - | hypothetical protein CPE1556 1825843 - 1823828 - | hypothetical protein TERM 2506 1825085 - 1825101 + g 76 -6.6 -4.39287 | ATTAGGAAATTTTGC TGGCAT AGCAG ATGCCA TTTTAGTATCATTGC CPE1557 1827095 - 1826145 - | hypothetical protein TERM 2507 1827464 - 1827449 - g 85 -4.7 -5.59357 | ATCATATCAAAAAAA GGCAT TCATAG ATGCC TGCATAAAATCAGTA TERM 2508 1827684 - 1827674 - g 70 -4 -4.89233 | CATTAAGAGTAAAAA TATC TAT GATA ATATTCAATCAAAGG CPE1558 1827243 - 1827884 + | di-trans, poly-cis-decaprenylcistransferase CPE1559 1827889 - 1829388 + | diapophytoene dehydrogenase TERM 2509 1829417 - 1829396 - T 83 -5.9 -5.38326 | opp_overlap 1829396 TTAACTAAATAAAAA GAGGTGTAT TATG ATACATCTC TTTAAAAATCTTGTA TERM 2510 1829396 - 1829417 + T 75 -8.1 -3.61774 | opp_overlap 1829396 TTAACTAAATAAAAA GAGGTGTAT TATG ATACATCTC TTTAAAAATCTTGTA CPE1560 1831110 - 1829419 - | GGDEF/HD domain protein TERM 2511 1831162 - 1831138 - R 93 -9.3 -4.48741 | opp_overlap 1831141, overlap 1831141 TAATCTAGTATAAAA TAAGGCCGGTT TAA AACCGACCTTT AGGTAAATTATTCAT TERM 2512 1831159 - 1831141 - R 100 -11 -4.35042 | opp_overlap 1831141, overlap 1831138 TCTAGTATAAAATAA GGCCGGTT TAA AACCGACC TTTAGGTAAATTATT TERM 2513 1831141 - 1831159 + r 79 -8.8 -3.69734 | opp_overlap 1831141 1831138 TCTAGTATAAAATAA GGCCGGTT TAA AACCGACC TTTAGGTAAATTATT CPE1561 1831969 - 1831325 - | hypothetical protein CPE1562 1832480 - 1831971 - | hypothetical protein CPE1563 1833015 - 1832449 - | hypothetical protein CPE1564 1833727 - 1833167 - | hypothetical protein TERM 2514 1833980 - 1833956 - R 100 -13.1 -6.22802 | TTTCACAAAAAAAAA TAACTGTCTTA ATT TAAGACAGTTA AAAAAAACTAATTTC CPE1565 1834983 - 1833988 - | hypothetical protein dinP 1836192 - 1835113 - | DNA polymerase IV TERM 2515 1836300 - 1836264 - R 100 -9.8 -4.55023 | opp_overlap 1836266, overlap 1836288 TCCAATATTATAAAA GATAAGTTTTAAACAA TAAAT CTATTTAAAACTTATC TTAAAATACAGGTAA ppiB 1836967 - 1836335 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-type TERM 2516 1837131 - 1837094 - R 100 -8.7 -5.79595 | opp_overlap 1837087 TCCTAAAACAAAAAA GGTATGTATTCTTTT TTTGTGTT ATAAGAATACATACC AAAAACTTTTTTATT CPE1568 1837549 - 1837145 - | hypothetical protein CPE1569 1838496 - 1837666 - | HAD hydrolase, IIB family TERM 2517 1838401 - 1838416 + g 76 -7.6 -3.99693 | overlap 1838410 TACTCCTTTTTCAAT GGCTTT CTTT AAAGCC TCTTTATTTCTTTCA CPE1570 1839513 - 1838800 - | phage shock protein A CPE1571 1840299 - 1839598 - | putative lipoprotein TERM 2518 1840740 - 1840718 - g 72 -2.8 -5.46629 | overlap 1840719 AAGATTTCAAAAAAA CTTATAAAGA TTC TCTTGATAAA ATATTTGTATGTTCT CPE1572 1840447 - 1841112 + | hypothetical protein CPE1573 1843692 - 1841356 - | bifunctional glutamate--cysteine ligase/glutathione synthetase TERM 2519 1843500 - 1843511 + g 72 -4.4 -5.04597 | TTTCTAACTGACTCT CAGA AAAA TCTG TTTTTATATATGCAT TERM 2520 1844100 - 1844077 - R 100 -6.8 -6.02919 | opp_overlap 1844077 TTATAAATAAAAAAA CACCATAGCT TTTT AACTATAGTG TCTTTTAGAACATTT CPE1574 1845006 - 1844089 - | hypothetical protein TERM 2521 1845148 - 1845105 - R 90 -11.4 -3.1541 | opp_overlap 1845108 1845113, overlap 1845113 ATTGATAATAAATTA TATAAAAATAGACTATATGA TAAA TCACATAGTCTATTTTCTTA ATTATTATATTAAAA TERM 2522 1845108 - 1845145 + r 79 -8.7 -3.62002 | opp_overlap 1845105 1845113, overlap 1845113 GATAATAAATTATAT AAAAATAGACTATATGA TAAA TCACATAGTCTATTTTC TTAATTATTATATTA TERM 2523 1845140 - 1845113 - R 100 -10.8 -5.06585 | opp_overlap 1845108 1845113, overlap 1845105 TAAATTATATAAAAA TAGACTATATGA TAAA TCACATAGTCTA TTTTCTTAATTATTA TERM 2524 1845113 - 1845140 + r 88 -8.6 -4.84262 | opp_overlap 1845113 1845105, overlap 1845108 TAAATTATATAAAAA TAGACTATATGA TAAA TCACATAGTCTA TTTTCTTAATTATTA CPE1575 1846442 - 1845153 - | hypothetical protein TERM 2525 1846174 - 1846152 - G 70 -6.4 -4.08485 | TGCAGTTAAAGCAAA TTCAAATGAA TAT CCCATTTGAA TAACTATTGTATAAG CPE1576 1847063 - 1846695 - | hypothetical protein TERM 2526 1847251 - 1847213 - R 100 -9 -5.79595 | opp_overlap 1847213 1847215 TTTCAAAATAAAAAA CCTACCTCTGGATATAAT AAA ATACTATCCAGAGATAAG TTTTTAAAATTTACT CPE1577 1848218 - 1847265 - | ABC transporter TERM 2527 1847290 - 1847315 + g 74 -8.3 -3.64716 | gap 1, overlap 1847289 TCCTTTTGATATGGC TCTCCAGCAGCC TTA GGC-GCTTGAGA TGTTTTAGAGAATAC CPE1578 1849315 - 1848218 - | ABC transporter TERM 2528 1848462 - 1848451 - G 75 -5.8 -4.78839 | opp_overlap 1848451 1848449 AAGCTGAGAATAAAA CTCC TATA GGAG TATTTGCACCAAGTA CPE1579 1850840 - 1849305 - | ABC transporter TERM 2529 1850933 - 1850953 + r 80 -9.7 -3.15579 | opp_overlap 1850933 GATTAGATAATAAAA GGAGATGGA AGC TCCATCCCC TTAATAAAAACTTCC TERM 2530 1850953 - 1850933 - R 100 -11.9 -4.85918 | opp_overlap 1850933 GATTAGATAATAAAA GGAGATGGA AGC TCCATCCCC TTAATAAAAACTTCC CPE1580 1852093 - 1850981 - | membrane lipoprotein TmpC precursor TERM 2531 1852638 - 1852615 - R 100 -11.2 -5.64421 | opp_overlap 1852620 ATCTTAAATAAAAAA GATCATAGTA AAAT TACTATGATC TAAACAAATTAAAAT CPE1581 1853468 - 1852647 - | lipase TERM 2532 1853821 - 1853803 - R 89 -9 -4.6902 | opp_overlap 1853803 1853802, overlap 1853810 GCATAAGTTCAAAAA TCCAAATT GAA AATTTGGA CTTTCACTTAAGTTT TERM 2533 1853803 - 1853821 + r 73 -9 -2.86965 | opp_overlap 1853803 1853810, overlap 1853802 GCATAAGTTCAAAAA TCCAAATT GAA AATTTGGA CTTTCACTTAAGTTT CPE1582 1854771 - 1853950 - | hypothetical protein CPE1583 1856486 - 1854780 - | ABC transporter TERM 2534 1855533 - 1855566 + g 71 -4.9 -4.78752 | gap 1, opp_overlap 1855533 1855535, overlap 1855535 1855537 ATTAATATCACTTAA TATATCTTTTTTCTTA TCG TAAGAAAA-AGATACA TTTTTAAATTCTAAT TERM 2535 1856621 - 1856593 - R 82 -5.3 -5.49809 | opp_overlap 1856593 TAAACTTCAAAAAAA GGTTGTCTGAAAA TAT CTTTCCCACAACC TCATATACTTCTAAT CPE1584 1857189 - 1856632 - | hypothetical protein CPE1585 1857409 - 1857861 + | rhodanese domain protein TERM 2536 1857870 - 1857909 + T 100 -19.8 -5.88476 | opp_overlap 1857862 1857873 1857877 1857883 AAAATAATCTTTTAA TGATAAAGAGAAATACTT TTTG AAGTATTTCTCTTTATCA TTTTTTATTTCTTTT TERM 2537 1857906 - 1857873 - T 100 -15.7 -2.72558 | opp_overlap 1857870, overlap 1857862 1857877 1857883 ATAATCTTTTAATGA TAAAGAGAAATACTT TTTG AAGTATTTCTCTTTA TCATTTTTTATTTCT TERM 2538 1857902 - 1857877 - T 100 -12.1 -4.05446 | opp_overlap 1857870, overlap 1857873 1857862 1857883 TCTTTTAATGATAAA GAGAAATACTT TTTG AAGTATTTCTC TTTATCATTTTTTAT CPE1586 1858230 - 1857907 - | hypothetical protein TERM 2539 1858349 - 1858323 - R 100 -10.3 -5.46698 | opp_overlap 1858323 TTTAAAAGCAAAAAA GACCACATAGA TATAT TCTATGTAGTC TTTTAAAAATTATTT TERM 2540 1858323 - 1858349 + r 79 -8.1 -4.17523 | opp_overlap 1858323 TTTAAAAGCAAAAAA GACCACATAGA TATAT TCTATGTAGTC TTTTAAAAATTATTT pulB 1861566 - 1858372 - | pullulanase glgB 1863660 - 1861666 - | glycogen branching enzyme TERM 2541 1863119 - 1863135 + g 72 -5.2 -4.69512 | TCATATATATTCATA GGTTTA TTATC TAAACC TTCTTTTTCTCTTTT TERM 2542 1863550 - 1863530 - G 77 -5.5 -4.85782 | opp_overlap 1863530 1863535 CCCTCTAAAAACAAA TCAAAGCTT AAT AAGCTTTCA TCTTTAGACACTTTT TERM 2543 1863674 - 1863711 + r 95 -11.7 -3.60884 | opp_overlap 1863667 1863679, overlap 1863679 ATAGTAAACCTCTCA TTAAAGCAAAATATTAT AAAC ACAATATTTTGCTTTAA TTATACTATTTTAGG TERM 2544 1863706 - 1863679 - R 84 -9.4 -3.73968 | opp_overlap 1863679 1863674, overlap 1863667 AAACCTCTCATTAAA GCAAAATATTAT AAAC ACAATATTTTGC TTTAATTATACTATT TERM 2545 1863679 - 1863706 + r 73 -7.2 -4.03782 | opp_overlap 1863667 1863679, overlap 1863674 AAACCTCTCATTAAA GCAAAATATTAT AAAC ACAATATTTTGC TTTAATTATACTATT CPE1589 1864447 - 1863740 - | hypothetical protein CPE1590 1864689 - 1865459 + | hypothetical protein CPE1591 1865456 - 1865947 + | hypothetical protein TERM 2546 1866037 - 1865991 - T 72 -4.8 -5.06585 | gap 1, opp_overlap 1865986 1865991 TAAATCACATAAAAA GGAGTTATATCAAAAGTTAAC AATAAA ACTTA-TTTTGATATAACTCC TTTTATGAGTTTTAT CPE1592 1866907 - 1866140 - | hypothetical protein TERM 2547 1866278 - 1866292 + g 70 -4.3 -4.8667 | ATCATAATCTTTTCT TATGG TTAAT CCATA TTTTTCTCCACTATC TERM 2548 1867180 - 1867155 - R 72 -4.7 -5.01732 | overlap 1867169 AATTTTTCTAAAAAA GAGAGCCTTAT AACT AAAAGACTCCC TTTAACATAATAAAC CPE1593 1868683 - 1867256 - | hypothetical protein CPE1594 1868967 - 1868755 - | hypothetical protein CPE1595 1869463 - 1869140 - | putative thioredoxin TERM 2549 1869521 - 1869494 - R 86 -9.3 -3.99957 | opp_overlap 1869490 1869488 CTAAATATGTATAAA GGGATGAATTC AATCTA AAATTCATCCC CTAATATAATTATAT CPE1596 1870518 - 1869559 - | acetylxylan esterase TERM 2550 1869741 - 1869751 + g 78 -4 -5.38047 | CTTTTCCTTTTATCC TATG AGC CATA TTTTTTATATCAATA TERM 2551 1870578 - 1870595 + H 89 -4.3 -6.11229 | TAATTATTCTCCCCT TATAAAT AATT ATTTATA TTTTTTTATTTTCAT CPE1597 1870960 - 1871823 + | hypothetical protein TERM 2552 1871839 - 1871869 + T 100 -11.3 -4.21945 | opp_overlap 1871839 1871844, overlap 1871844 TATTTTCTTAAACTA CAAAAGGCACTAG AGTAA CTAGTGCCTTTTA TTTCTCTGTATTAAT TERM 2553 1871869 - 1871839 - T 93 -13.5 -2.90813 | opp_overlap 1871839 1871844, overlap 1871844 TATTTTCTTAAACTA CAAAAGGCACTAG AGTAA CTAGTGCCTTTTA TTTCTCTGTATTAAT TERM 2554 1871844 - 1871864 + T 100 -11.2 -5.07523 | opp_overlap 1871844 1871839, overlap 1871839 TCTTAAACTACAAAA GGCACTAG AGTAA CTAGTGCC TTTTATTTCTCTGTA TERM 2555 1871864 - 1871844 - T 100 -11.2 -4.61566 | opp_overlap 1871839 1871844, overlap 1871839 TCTTAAACTACAAAA GGCACTAG AGTAA CTAGTGCC TTTTATTTCTCTGTA CPE1598 1872334 - 1871906 - | hypothetical protein thiE 1873027 - 1872446 - | thiamine monophosphate synthase family protein thiH 1874160 - 1873057 - | thiamine biosynthesis protein ThiH thiG 1874937 - 1874173 - | thiazole synthase CPE1602 1875870 - 1875061 - | thiamine biosynthesis protein ThiF CPE1603 1876140 - 1875946 - | thiamine biosynthesis protein ThiS TERM 2556 1876190 - 1876211 + r 100 -11.7 -4.1413 | opp_overlap 1876190 ATACCAACAAAAAAA GGTTTAGCA ATAT TGCTAAACC TTTTAAAAATATATT TERM 2557 1876211 - 1876190 - R 100 -11.7 -5.85737 | opp_overlap 1876190 ATACCAACAAAAAAA GGTTTAGCA ATAT TGCTAAACC TTTTAAAAATATATT CPE1604 1878116 - 1876416 - | transporter, major facilitator family TERM 2558 1878153 - 1878204 + r 75 -9.2 -2.66522 | overlap 1878141 1878150 TTTTACTTATTCTAA GTGTGACTTTTATTAATATTATTT TTTT AAATACTATTAATAAAACTCACAG TGAATTATGTTCAGT CPE1605 1879261 - 1878452 - | GTP pyrophosphokinase-like protein CPE1606 1879612 - 1879313 - | hypothetical protein CPE1607 1880113 - 1879670 - | methionine sulfoxide reductase B CPE1608 1880836 - 1880189 - | hypothetical protein CPE1609 1880986 - 1881285 + | hypothetical protein TERM 2559 1881322 - 1881283 - T 100 -16.9 -5.29385 | opp_overlap 1881283 1881291 AATTTAAGTAAAAAA TAAGAAAACATCATTAG TATTTT CTAATGATGTTTTCTTA TTTTTACTATTTACT TERM 2560 1881283 - 1881322 + T 100 -16.9 -4.946 | opp_overlap 1881283, overlap 1881291 AATTTAAGTAAAAAA TAAGAAAACATCATTAG TATTTT CTAATGATGTTTTCTTA TTTTTACTATTTACT TERM 2561 1881291 - 1881314 + T 95 -8.3 -5.16681 | opp_overlap 1881283, overlap 1881283 TAAAAAATAAGAAAA CATCATTAG TATTTT CTAATGATG TTTTCTTATTTTTAC CPE1610 1882312 - 1881329 - | endo-1,4-beta-xylanase TERM 2562 1882536 - 1882493 - R 100 -9.3 -5.4505 | opp_overlap 1882493 1882496, overlap 1882476 TTTTCTAATAAAAAA TAAGAATAAACTCTATTAA GATAAA TTACTAAAGTTTATTCTTA TGATTAATTAAATTT CPE1611 1882822 - 1882553 - | hypothetical protein CPE1612 1882925 - 1883578 + | hypothetical protein TERM 2563 1883624 - 1883596 - T 100 -7.5 -5.61881 | opp_overlap 1883596 CTTTAAAAATAAAAA TAGTCCAAGGA TTTTTCT TCCTAGGACTA TTTTTATATTTGTAA TERM 2564 1883596 - 1883624 + T 93 -7.5 -5.24799 | opp_overlap 1883596 CTTTAAAAATAAAAA TAGTCCAAGGA TTTTTCT TCCTAGGACTA TTTTTATATTTGTAA CPE1613 1884012 - 1883647 - | hypothetical protein CPE1614 1885466 - 1884141 - | cell wall-binding protein TERM 2565 1885660 - 1885613 - R 77 -6.7 -4.57569 | opp_overlap 1885613 CTATGCTTTTAAAAA GACTATACAAAAACATACT TTTCTTAAGT AATATGCTTTTATATAGTC CTTAATTATAAATTA CPE1615 1885927 - 1885709 - | hypothetical protein TERM 2566 1886170 - 1886160 - g 70 -4 -4.8622 | TTTGTTAAGTAAAAA TCTT AAC AAGA AAGAGCGAGAAGTGT CPE1616 1886074 - 1886262 + | hypothetical protein TERM 2567 1886291 - 1886272 - T 100 -8.6 -5.63103 | opp_overlap 1886272 TTTTAATGAAAAAAA GGTCCAAC AAAA GTTGAACC TTTAAACAAACTCAA CPE1617 1887010 - 1886615 - | hypothetical protein CPE1618 1887283 - 1887026 - | hypothetical protein CPE1619 1889591 - 1887300 - | ATP-dependent DNA helicase, UvrD/REP family TERM 2568 1888179 - 1888160 - G 75 -5.8 -4.7373 | opp_overlap 1888161 1888169 TTACTTCATTAAAAA TTTCCTTG TTTT CAAAGAAA TTTTTATAAACATTA TERM 2569 1888169 - 1888179 + g 70 -4 -4.8543 | opp_overlap 1888160, overlap 1888161 TAAAAATTTCCTTGT TTTC AAA GAAA TTTTTATAAACATTA TERM 2570 1889360 - 1889372 + g 70 -6.3 -4.10717 | TTCTTGCAAAGTATG GCTTA TTA TAAGC TTCTTTAAATTTTTC TERM 2571 1889711 - 1889692 - H 82 -9.4 -3.33261 | overlap 1889706 TTTTAATTTCTAGAA TACACCTT AAAA AAGGTGTA AAAGACTACTTCATT TERM 2572 1890234 - 1890215 - g 87 -3.6 -5.86061 | overlap 1890217 CGTTACGAAAAAAAA TGTAAGTC TAAT GACTTAAA AAATTTACTAAATGA CPE1620 1890116 - 1890586 + | hypothetical protein TERM 2573 1890613 - 1890592 - T 72 -5.9 -4.41348 | opp_overlap 1890593, overlap 1890593 CTTTTTCTAAATAAA CTAGGCTAT ATAA ATAGCCTAT AAATTAAAGCTTATA TERM 2574 1890612 - 1890593 - T 80 -9.4 -3.24488 | opp_overlap 1890593, overlap 1890592 TTTTTCTAAATAAAC TAGGCTAT ATAA ATAGCCTA TAAATTAAAGCTTAT TERM 2575 1890593 - 1890612 + T 75 -9.4 -2.5409 | opp_overlap 1890592 1890593 TTTTTCTAAATAAAC TAGGCTAT ATAA ATAGCCTA TAAATTAAAGCTTAT TERM 2576 1890618 - 1890658 + T 95 -10.1 -4.29656 | opp_overlap 1890618 1890617 1890622 1890623, overlap 1890623 AAATAGCCTATAAAT TAAAGCTTATAAGTTGTTT ATT AAACTATTTATAAGTTTTA TTTTAAGCTTTTATA TERM 2577 1890623 - 1890653 + T 93 -7.8 -5.10163 | opp_overlap 1890623 1890622 1890618 1890617, overlap 1890618 GCCTATAAATTAAAG CTTATAAGTTGTTT ATT AAACTATTTATAAG TTTTATTTTAAGCTT CPE1621 1891475 - 1890669 - | hypothetical protein CPE1622 1892739 - 1891744 - | hypothetical protein CPE1623 1892881 - 1893546 + | putative lipoprotein TERM 2578 1893764 - 1893787 + F 71 -8.4 -3.01767 | opp_overlap 1893763 1893774, overlap 1893762 1893774 ATATTGTTTATAAGT TTTATCAAAA GGTA TTTTGATAAA TGCCTTTTTTTAATT TERM 2579 1893774 - 1893791 + F 84 -4.9 -5.72207 | opp_overlap 1893763 1893774, overlap 1893764 1893762 TAAGTTTTATCAAAA GGTATTT TGAT AAATGCC TTTTTTTAATTTCAA CPE1624 1893868 - 1895793 + | hypothetical protein CPE1625 1899472 - 1896218 - | helicase, SNF2/RAD54 family TERM 2580 1898006 - 1898016 + g 74 -5.4 -4.94992 | TCCCTTTATCCCCTT GCTT CCT AAGC TTTTTATACCTTTAA CPE1626 1900825 - 1899839 - | transcriptional regulator rbsB 1901404 - 1900964 - | ribose ABC transporter CPE1628 1901876 - 1901337 - | ribose ABC transporter TERM 2581 1901889 - 1901901 + r 77 -4.9 -5.38321 | CATAAAACTCACCTC TTAAG CTT CTTAA TTTTTTCTGCTCTTT rbsC 1902833 - 1901898 - | ribose ABC transporter rbsA 1904352 - 1902847 - | ribose ABC transporter TERM 2582 1903168 - 1903181 + g 73 -3.8 -5.26155 | ATTCTTAATAAACTG CTCC TTATTT GGAG TTTTTATGTTTATCT TERM 2583 1903958 - 1903970 + g 76 -6.3 -4.63107 | opp_overlap 1903957 1903953 ATATCACAACCAATT TGTTC TAA GAACA TTTTGCTTCTTTCAT TERM 2584 1904424 - 1904389 - R 89 -10 -3.55444 | opp_overlap 1904388 1904389, overlap 1904392 TTCCTATTTTGCAAA GAATATTCCACTCA ATAAACGA TGAGTAGAATATTC ATTTTTAAACTTTTT TERM 2585 1904389 - 1904424 + r 70 -7.8 -3.44315 | opp_overlap 1904389 1904392, overlap 1904388 TTCCTATTTTGCAAA GAATATTCCACTCA ATAAACGA TGAGTAGAATATTC ATTTTTAAACTTTTT rbsD 1904834 - 1904439 - | D-ribose pyranase rbsK 1905769 - 1904837 - | ribokinase TERM 2586 1905896 - 1905871 - R 100 -12.1 -5.9667 | opp_overlap 1905873 AAAAATATAAAAAAA GAGTATAGATT TTTA AATCTATACTC TTAAACTAGCTATTT TERM 2587 1905873 - 1905894 + r 74 -8.9 -3.06671 | opp_overlap 1905871 AAATATAAAAAAAGA GTATAGATT TTTA AATCTATAC TCTTAAACTAGCTAT def 1906377 - 1905910 - | polypeptide deformylase TERM 2588 1906319 - 1906330 + g 72 -4.4 -5.055 | opp_overlap 1906319 TTAACATCTTTAACA GGTT CTGA AACC TTTTTTAAAGCTTCG TERM 2589 1906531 - 1906473 - R 100 -18.1 -2.78032 | gap 1, opp_overlap 1906473 1906475 1906495, overlap 1906472 1906475 1906526 TTCTCTGTAAAATAT TATTGACTGTCTTTAAAGCAT-CTAAGT TAAA ACTTATTATACTTTAAAGACAGTCAATA CTTATAATATTATCA TERM 2590 1906473 - 1906531 + r 100 -15.9 -2.72381 | gap 1, opp_overlap 1906472 1906473 1906475 1906526, overlap 1906475 1906495 TTCTCTGTAAAATAT TATTGACTGTCTTTAAAGCAT-CTAAGT TAAA ACTTATTATACTTTAAAGACAGTCAATA CTTATAATATTATCA TERM 2591 1906529 - 1906475 - R 100 -16.3 -2.93623 | gap 1, opp_overlap 1906473 1906475 1906495, overlap 1906472 1906473 1906526 CTCTGTAAAATATTA TTGACTGTCTTTAAAGCAT-CTAAGT TAAA ACTTATTATACTTTAAAGACAGTCAA TACTTATAATATTAT TERM 2592 1906475 - 1906529 + r 100 -14.1 -2.89929 | gap 1, opp_overlap 1906475 1906472 1906473 1906526, overlap 1906473 1906495 CTCTGTAAAATATTA TTGACTGTCTTTAAAGCAT-CTAAGT TAAA ACTTATTATACTTTAAAGACAGTCAA TACTTATAATATTAT tagO 1907492 - 1906533 - | undecaprenyl-phosphate N-acetylglucosaminyltransferase CPE1635 1908204 - 1907638 - | transcriptional regulator TERM 2593 1908398 - 1908364 - R 82 -4.6 -5.69793 | gap 2, opp_overlap 1908364 ATAGTAAAGAAAAAA GGCAAATCTTGATGTT TTATT AACAT-AAGATT-GCC TTTTTTATTAATTTA TERM 2594 1908364 - 1908398 + r 78 -4.6 -5.59655 | gap 2, opp_overlap 1908364 ATAGTAAAGAAAAAA GGCAAATCTTGATGTT TTATT AACAT-AAGATT-GCC TTTTTTATTAATTTA ntpD 1909064 - 1908420 - | V-type ATP synthase subunit D TERM 2595 1908876 - 1908891 + g 79 -7.6 -4.21098 | AACGAAGTCTTTTAA GGAACT TCCT AGTTCC TTTTCAACTTCATCT ntpB 1910449 - 1909067 - | V-type ATP synthase subunit B ntpA 1912217 - 1910442 - | V-type ATP synthase subunit A TERM 2596 1910605 - 1910615 + g 70 -5.4 -4.60487 | opp_overlap 1910600 TCTAAATAAACTCCA GCTT CTA AAGC TTTTTCAGCCTCATG TERM 2597 1911852 - 1911866 + g 72 -2.8 -5.46276 | TCCAACCTTAGCAGT TGGC ACAAAAG GCCA TTTTTTCTCTCTATT TERM 2598 1911933 - 1911912 - G 73 -8.8 -3.05596 | opp_overlap 1911916, overlap 1911916 1911923 TACCCCTTTACTTAA GAAAGCAG AATTAG CTGCTTTC ATGAAAGCGTCTAGA ntpF 1912551 - 1912234 - | V-type ATP synthase subunit F ntpC 1913545 - 1912538 - | V-type ATP synthase subunit C TERM 2599 1913212 - 1913240 + g 73 -9 -3.07575 | opp_overlap 1913193 CTGGTATTAGCATTT GGGAAAAATCTT TATCT AAGATTTTCCCC TTAACTAACACTTTT ntpE 1914154 - 1913558 - | V-type ATPase, E subunit ntpK 1914679 - 1914185 - | V-type ATP synthase subunit K ntpI 1916680 - 1914734 - | V-type ATP synthase subunit I TERM 2600 1916471 - 1916483 + g 71 -4.9 -4.84311 | overlap 1916478 GTCTAAAGCTGATCT TGTTT TTG AAACA TTTTCTTCTATAAGA CPE1644 1916993 - 1916667 - | hypothetical protein TERM 2601 1917239 - 1917201 - R 72 -4.9 -4.91459 | opp_overlap 1917201 1917221 TAACATTTACAAAAA GTCGTATTAATAT CTTTGCATATTGT ATATTAATACGAC TAATATACTAATAAA CPE1645 1918949 - 1917270 - | radical SAM domain protein CPE1646 1919451 - 1918849 - | hypothetical protein TERM 2602 1918926 - 1918942 + g 73 -5.9 -4.64613 | AATGTACTTTGAGTT TATTGCT GTT AGCAGTA TTTTCATTCTTTATA TERM 2603 1919495 - 1919542 + r 83 -6.8 -5.23292 | gap 1, opp_overlap 1919500, overlap 1919500 ATTTCTATTATACAT TTA-AAGAGTAATTCTTTCTA TGCTTAT TAGAAAAAATTACTCTTATAA TTTTATTTTCTATAA TERM 2604 1919500 - 1919536 + r 76 -8.3 -3.79451 | opp_overlap 1919500, overlap 1919495 TATTATACATTTAAA GAGTAATTCTTTCTA TGCTTAT TAGAAAAAATTACTC TTATAATTTTATTTT TERM 2605 1919536 - 1919500 - R 91 -10.5 -3.74792 | opp_overlap 1919500 1919495 TATTATACATTTAAA GAGTAATTCTTTCTA TGCTTAT TAGAAAAAATTACTC TTATAATTTTATTTT CPE1647 1920884 - 1919598 - | hypothetical protein spoVB 1921032 - 1922561 + | stage V sporulation protein B CPE1649 1923455 - 1922655 - | hypothetical protein TERM 2606 1923019 - 1923034 + g 70 -6.2 -4.12267 | opp_overlap 1923028, overlap 1923012 1923028 TTCTCTACTTTCTTT GCATTT AAAG AAATGC TTTCCTTGTTATAAT TERM 2607 1923525 - 1923556 + r 100 -13.2 -6.04419 | opp_overlap 1923525 TATAGTAATAAAAAA GAGCTATATAGAGT AAAA ACTCCATATAGCTC TTTTTTTATTATTTT TERM 2608 1923556 - 1923525 - R 100 -15.4 -5.5353 | opp_overlap 1923525 TATAGTAATAAAAAA GAGCTATATAGAGT AAAA ACTCCATATAGCTC TTTTTTTATTATTTT CPE1650 1924407 - 1923565 - | hypothetical protein CPE1651 1924922 - 1924419 - | hypothetical protein TERM 2609 1925288 - 1925301 + G 73 -3.9 -5.2189 | opp_overlap 1925270 TTAGAACATGCTCGC TCTAA TGGA TTAGA TTTTTTAATAATTAC CPE1652 1925171 - 1926172 + | hypothetical protein TERM 2610 1926178 - 1926202 + T 100 -8.7 -5.49729 | opp_overlap 1926178, overlap 1926182 TTATGAATAAAAAAA CAAACTCCATT AAT AATGGAGTTTA TTTTTTTGAATCCTT TERM 2611 1926202 - 1926178 - T 100 -10.9 -5.84381 | opp_overlap 1926178 1926182 TTATGAATAAAAAAA CAAACTCCATT AAT AATGGAGTTTA TTTTTTTGAATCCTT TERM 2612 1926182 - 1926198 + T 100 -9.5 -5.21683 | opp_overlap 1926178, overlap 1926178 GAATAAAAAAACAAA CTCCATT AAT AATGGAG TTTATTTTTTTGAAT CPE1653 1926550 - 1926200 - | hypothetical protein CPE1654 1926770 - 1927240 + | AsnC family transcriptional regulator TERM 2613 1927245 - 1927264 + F 100 -9.4 -6.18768 | opp_overlap 1927245 1927249 TAACCCTTTAAAAAA GAAATAGC TTAA GCTATTTC TTTTTTTTATATTTT TERM 2614 1927264 - 1927245 - f 100 -9.4 -5.03145 | opp_overlap 1927245, overlap 1927249 TAACCCTTTAAAAAA GAAATAGC TTAA GCTATTTC TTTTTTTTATATTTT TERM 2615 1927260 - 1927249 - f 70 -4.4 -5.04249 | opp_overlap 1927245, overlap 1927245 CCTTTAAAAAAGAAA TAGC TTAA GCTA TTTCTTTTTTTTATA CPE1655 1927347 - 1927550 + | hypothetical protein TERM 2616 1927552 - 1927602 + T 100 -12.3 -5.20154 | gap 1, opp_overlap 1927554 1927558, overlap 1927558 GTATAAAAGAATAAA AAT-AAAGCTAAATCCCTATTAGA AATC TCTAATAGGGATTTAGCTTTTACA TTTTTTCAATTATAT TERM 2617 1927599 - 1927554 - T 100 -20.9 -5.47964 | opp_overlap 1927552 1927558, overlap 1927558 ATAAAAGAATAAAAA TAAAGCTAAATCCCTATTAGA AATC TCTAATAGGGATTTAGCTTTT ACATTTTTTCAATTA TERM 2618 1927595 - 1927558 - T 100 -21.7 -5.11254 | opp_overlap 1927558 1927552, overlap 1927554 AAGAATAAAAATAAA GCTAAATCCCTATTAGA AATC TCTAATAGGGATTTAGC TTTTACATTTTTTCA TERM 2619 1927558 - 1927595 + T 100 -21.7 -4.5366 | opp_overlap 1927554 1927558, overlap 1927552 AAGAATAAAAATAAA GCTAAATCCCTATTAGA AATC TCTAATAGGGATTTAGC TTTTACATTTTTTCA CPE1656 1929343 - 1927598 - | hypothetical protein TERM 2620 1929186 - 1929213 + g 72 -2.8 -5.44119 | opp_overlap 1929186 GCTTCACTTAAGAAT CTAAAATTATGA CTCT TCTTATTTTTAG TTTTTTTCAAATAAG comEC 1929544 - 1930398 + | late competence protein TERM 2621 1930382 - 1930437 + T 100 -19.6 -3.86202 | gap 1, opp_overlap 1930395, overlap 1930395 1930421 ATGGAAAATCTATAA AAAAGC-ATAAAAACTAAAGGCACCAA TTA TTGGTGCCTTTAGTTTTTATAGTTTTA TTTACTATAATAAAC TERM 2622 1930423 - 1930395 - T 100 -19.1 -5.14894 | opp_overlap 1930382 1930395 1930421 AAAAAAGCATAAAAA CTAAAGGCACCAA TTA TTGGTGCCTTTAG TTTTTATAGTTTTAT TERM 2623 1930395 - 1930423 + T 100 -19.1 -5.10601 | opp_overlap 1930395, overlap 1930382 1930421 AAAAAAGCATAAAAA CTAAAGGCACCAA TTA TTGGTGCCTTTAG TTTTTATAGTTTTAT CPE1658 1931138 - 1930455 - | hypothetical protein TERM 2624 1931240 - 1931217 - H 75 -7 -4.29227 | opp_overlap 1931209, overlap 1931209 1931239 TTAAGTATTAATAAA TATTAATTAA ATTT TTAATTAATA GAATTTATCAATTGA feoA 1931324 - 1931542 + | ferrous iron transport protein A TERM 2625 1931797 - 1931775 - g 71 -3.4 -5.24551 | overlap 1931778 TCAAACGAAGAAAAA GTATCTAAGA AAT TCTTAGAATC TGGAGATGTTGATTT TERM 2626 1931794 - 1931778 - g 73 -8.1 -3.41572 | overlap 1931775 AACGAAGAAAAAGTA TCTAAGA AAT TCTTAGA ATCTGGAGATGTTGA feoB 1931580 - 1933343 + | ferrous iron transport protein B TERM 2627 1933538 - 1933513 - T 100 -13.5 -5.71638 | opp_overlap 1933513 TAAGAAGTAAAAAAA TAACCAATTCC AAAT GGAATTGGTTA TTTTTTATTATAAAT TERM 2628 1933513 - 1933538 + T 100 -13.5 -5.56673 | opp_overlap 1933513 TAAGAAGTAAAAAAA TAACCAATTCC AAAT GGAATTGGTTA TTTTTTATTATAAAT argS 1935250 - 1933553 - | arginyl-tRNA synthetase TERM 2629 1935337 - 1935363 + H 76 -9.4 -2.87931 | opp_overlap 1935338 1935358 1935360 TTTACAATATAAAAA ACCGCCTCTTTG TAA CAAAGAGACGGA TATATCCGCGGTACC TERM 2630 1935362 - 1935338 - H 100 -15.1 -5.5208 | opp_overlap 1935337, overlap 1935358 1935360 TTACAATATAAAAAA CCGCCTCTTTG TAA CAAAGAGACGG ATATATCCGCGGTAC TERM 2631 1936083 - 1936099 + G 71 -6.7 -3.93742 | opp_overlap 1936083 1936082 GAAATTAATTATAAC TTTTTAG GAG CTAAAAA TTCTCTTTATATAGA TERM 2632 1936496 - 1936478 - g 77 -4.6 -5.1971 | overlap 1936480 ACTAAAAAGTAAAAA TCTTCGTC AGA GACAAAAA ATTGAAGGACTTTCT CPE1662 1935732 - 1937240 + | Ppx/GppA phosphatase family protein TERM 2633 1937249 - 1937276 + T 100 -10 -5.09426 | opp_overlap 1937249 AGCCTAAATAAAAAA GTTTATGGGAAA CTAT TCTCCCATAAAC TTTTTTAAACTTACA TERM 2634 1937276 - 1937249 - T 100 -12.2 -5.64421 | opp_overlap 1937249 AGCCTAAATAAAAAA GTTTATGGGAAA CTAT TCTCCCATAAAC TTTTTTAAACTTACA CPE1663 1938552 - 1937338 - | hypothetical protein TERM 2635 1938636 - 1938672 + r 70 -7.6 -3.3197 | opp_overlap 1938636 AGATTAGATATTAAA TTTGAAAATAACTTAT AAATC AAGAGTTATTTTCAAA TTATAAACCTAATCT CPE1664 1939338 - 1938718 - | peptidase, M50 family TERM 2636 1939529 - 1939488 - R 76 -6 -4.77986 | gap 1, opp_overlap 1939490 1939492, overlap 1939490 CTAAACATTTAAAAA TAGAGGTTCCTTTCCTCCT TATTT AGGAGTAA-GAAACCTCTT AAAATTCTAAATATT TERM 2637 1939527 - 1939490 - R 78 -8.6 -3.9951 | gap 1, opp_overlap 1939490 1939492, overlap 1939488 AAACATTTAAAAATA GAGGTTCCTTTCCTCCT TATTT AGGAGTAA-GAAACCTC TTAAAATTCTAAATA CPE1665 1940922 - 1939543 - | PhoH family protein TERM 2638 1940985 - 1941028 + H 75 -6.5 -4.4648 | opp_overlap 1940987 1940991 TTTCATTTGTTTATA TATTAATATTTAAGAAT ACTCAATATA ATTCTTAAATATTGATA TTTTATAATCAAAAT CPE1666 1941144 - 1941758 + | hypothetical protein TERM 2639 1941762 - 1941782 + T 95 -5.6 -5.99154 | opp_overlap 1941762 GAAGCAAAATAAAAA GATATATT TTCAC AATATATC TTTTTTTCTTTACTA TERM 2640 1941782 - 1941762 - T 82 -5.6 -5.54338 | opp_overlap 1941762 GAAGCAAAATAAAAA GATATATT TTCAC AATATATC TTTTTTTCTTTACTA CPE1667 1942124 - 1941795 - | single-strand binding protein TERM 2641 1942322 - 1942341 + r 87 -6.6 -5.4148 | opp_overlap 1942322 AACTTAAAGTAAAAA TTCATAAA TATT TTTATGAA TTTTTTAATTGTTTC TERM 2642 1942341 - 1942322 - R 80 -6.6 -5.01042 | opp_overlap 1942322 AACTTAAAGTAAAAA TTCATAAA TATT TTTATGAA TTTTTTAATTGTTTC TERM 2643 1942359 - 1942402 + r 71 -8.4 -3.10474 | opp_overlap 1942366, overlap 1942362 1942363 1942366 TTTTAATTGTTTCCA TAAAAAAGAGCTATTAAAGA TAAA TCTTTAATAGCTCTAAATTA TATTAAACTGTTATA TERM 2644 1942363 - 1942398 + r 76 -9.2 -2.80513 | opp_overlap 1942366, overlap 1942362 1942359 1942366 AATTGTTTCCATAAA AAAGAGCTATTAAAGA TAAA TCTTTAATAGCTCTAA ATTATATTAAACTGT TERM 2645 1942395 - 1942366 - R 100 -15.3 -5.24129 | opp_overlap 1942366 1942363 1942362 1942359 TGTTTCCATAAAAAA GAGCTATTAAAGA TAAA TCTTTAATAGCTC TAAATTATATTAAAC TERM 2646 1942366 - 1942395 + r 100 -15.3 -2.66255 | opp_overlap 1942366, overlap 1942363 1942362 1942359 TGTTTCCATAAAAAA GAGCTATTAAAGA TAAA TCTTTAATAGCTC TAAATTATATTAAAC purB 1943835 - 1942405 - | adenylosuccinate lyase TERM 2647 1942560 - 1942577 + g 70 -5.7 -4.21393 | opp_overlap 1942559 1942560 CTTCTTTAGAAAGAT TAAATGA AGGA TCATTTA TTATTCTTTCTATTA TERM 2648 1943884 - 1943914 + r 87 -6.4 -5.43414 | opp_overlap 1943875 1943886, overlap 1943878 1943886 AATTTATTATATCAT AAGATAAGTTTATT ATA AATAAATTTATCTA TTTTTTATCTATCAT TERM 2649 1943886 - 1943912 + r 84 -9 -4.34353 | opp_overlap 1943886, overlap 1943878 1943884 TTTATTATATCATAA GATAAGTTTATT ATA AATAAATTTATC TATTTTTTATCTATC TERM 2650 1944071 - 1944044 - R 100 -14.4 -4.94992 | opp_overlap 1944049 1944068, overlap 1944034 1944049 CTAAATTTATAAAAA TAAAAGGATTCC ACTA GGAATCCTTTTA CGAAGATTACTCTTC TERM 2651 1944066 - 1944049 - R 100 -9.9 -5.35224 | opp_overlap 1944049, overlap 1944044 TTTATAAAAATAAAA GGATTCC ACTA GGAATCC TTTTACGAAGATTAC TERM 2652 1944049 - 1944066 + r 93 -9.9 -4.09739 | opp_overlap 1944049 1944044 TTTATAAAAATAAAA GGATTCC ACTA GGAATCC TTTTACGAAGATTAC hpr 1944338 - 1944078 - | phosphocarrier protein aspC 1945626 - 1944433 - | aspartate aminotransferase TERM 2653 1945742 - 1945711 - R 100 -11.1 -5.59655 | opp_overlap 1945709 1945707 1945711 TAAACCAATAAAAAA TACTGCTATAAGT TAAAAT ACTCATAGCAGTA TCTATTTATTTACCA TERM 2654 1945711 - 1945742 + r 79 -8.9 -3.48884 | opp_overlap 1945711, overlap 1945709 1945707 TAAACCAATAAAAAA TACTGCTATAAGT TAAAAT ACTCATAGCAGTA TCTATTTATTTACCA spoVS 1946039 - 1945779 - | stage V sporulation protein S TERM 2655 1946207 - 1946184 - R 100 -12.6 -5.04082 | opp_overlap 1946184 TAAATAATAAGAAAA CTCTACTGAA ATCA TTCAGTAGAG TTAATTAAAAAAATA TERM 2656 1946184 - 1946207 + r 95 -12.6 -3.34013 | opp_overlap 1946184 TAAATAATAAGAAAA CTCTACTGAA ATCA TTCAGTAGAG TTAATTAAAAAAATA TERM 2657 1946242 - 1946221 - R 100 -8.9 -5.64006 | opp_overlap 1946221 1946239, overlap 1946239 AGTTAATTAAAAAAA TACATTTTG TAAC CAAAATGTA TTTTACATATTCATT TERM 2658 1946221 - 1946242 + r 84 -8.9 -4.29928 | opp_overlap 1946221 1946239, overlap 1946239 AGTTAATTAAAAAAA TACATTTTG TAAC CAAAATGTA TTTTACATATTCATT CPE1672 1947849 - 1946257 - | phosphodiesterase TERM 2659 1948142 - 1948106 - R 87 -10.6 -3.19859 | gap 1, opp_overlap 1948115, overlap 1948115 GAAGTGATAAAATTA TAA-AAAAAAGATAAGG AAAT CCTTATCTTTTTTATTA GCTTTCAACAGACTC TERM 2660 1948115 - 1948132 + r 100 -8.5 -5.52096 | opp_overlap 1948106 1948115 AAATTATAAAAAAAA GATAAGG AAAT CCTTATC TTTTTTATTAGCTTT TERM 2661 1948132 - 1948115 - R 100 -8.5 -6.04378 | opp_overlap 1948115, overlap 1948106 AAATTATAAAAAAAA GATAAGG AAAT CCTTATC TTTTTTATTAGCTTT recA 1949198 - 1948140 - | recombinase A TERM 2662 1949298 - 1949273 - R 93 -11.3 -3.41203 | opp_overlap 1949271 1949273, overlap 1949279 AAAAGTCAACATCAA CATGAAGTTCT TAAA AGAACCTCATG TCTTAATAATTGACT TERM 2663 1949273 - 1949298 + r 75 -9.1 -3.20494 | opp_overlap 1949273 1949279, overlap 1949271 AAAAGTCAACATCAA CATGAAGTTCT TAAA AGAACCTCATG TCTTAATAATTGACT CPE1674 1949924 - 1949334 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CPE1675 1951245 - 1949908 - | hypothetical protein TERM 2664 1950354 - 1950364 + g 78 -4 -5.4833 | opp_overlap 1950341 1950354, overlap 1950341 AAGTTCTTAAAACTA TGTT AGG AACA TTTTTTCTTAAATCA TERM 2665 1951292 - 1951310 + r 70 -3.2 -5.37171 | TCTTATTTTAAAACT CTTTTTTA AAT TAAACAAG TTTTTATTTCATATT spoIIIE 1953704 - 1951314 - | DNA translocase FtsK TERM 2666 1953819 - 1953847 + r 72 -9 -2.62921 | opp_overlap 1953820, overlap 1953822 1953825 TTTTATATTACATAA ATAGAACCATAG ATATA CTATGGTTCTAC ATTATAAGCTTCTAT TERM 2667 1953846 - 1953820 - R 100 -12.5 -4.11404 | opp_overlap 1953819 1953822 1953825 TTTATATTACATAAA TAGAACCATAG ATATA CTATGGTTCTA CATTATAAGCTTCTA TERM 2668 1953822 - 1953844 + r 81 -10.7 -2.60555 | opp_overlap 1953820, overlap 1953819 1953825 TATATTACATAAATA GAACCATAG ATATA CTATGGTTC TACATTATAAGCTTC CPE1677 1954579 - 1953836 - | Clp protease TERM 2669 1954566 - 1954531 - G 79 -10.6 -2.9914 | opp_overlap 1954529 TATGTTCCATATATA TCCCTCCTGTACTAAA ATTA TTTTGTACAGAAAGGA AATTTATATACATTA dapG 1955775 - 1954579 - | aspartate kinase I TERM 2670 1955557 - 1955575 + g 74 -3.2 -5.42198 | opp_overlap 1955557 TCCACATCCCATAAG TAAATCAG TAG CTAATTTA TTTTCTTTTTTAAAC CPE1679 1956064 - 1955789 - | PRC-barrel domain protein TERM 2671 1956197 - 1956171 - R 90 -6.1 -5.95946 | gap 1, opp_overlap 1956172 1956177 1956178, overlap 1956177 TGAATAAGAAAAAAA TAAAAAGGCAAT AATA ATTGCC-TTTTA CTATTGCTGTTTATT TERM 2672 1956177 - 1956192 + r 81 -7.6 -4.45399 | opp_overlap 1956171 1956177, overlap 1956172 1956178 AGAAAAAAATAAAAA GGCAAT AATA ATTGCC TTTTACTATTGCTGT TERM 2673 1956192 - 1956177 - R 100 -7.6 -5.89659 | opp_overlap 1956177 1956172 1956178, overlap 1956171 AGAAAAAAATAAAAA GGCAAT AATA ATTGCC TTTTACTATTGCTGT pnpA 1958306 - 1956198 - | polynucleotide phosphorylase/polyadenylase TERM 2674 1958059 - 1958072 + g 72 -6.7 -4.06182 | overlap 1958051 AGTATAGCTTTCTCT GAAGG TTTT CCTTC TCTTTTTATAAATCC TERM 2675 1958395 - 1958366 - R 82 -8.7 -4.14472 | opp_overlap 1958365 1958361 1958368 1958373, overlap 1958355 1958369 TTAATATTTTTAAAA TAATAGAGCGG TAAAAAAC CCGCTCTACTA AATTATCTTCTTAAT TERM 2676 1958392 - 1958369 - R 79 -8.2 -4.18908 | opp_overlap 1958368 1958365 1958361 1958373, overlap 1958366 ATATTTTTAAAATAA TAGAGCGG TAAAAAAC CCGCTCTA CTAAATTATCTTCTT rpsO 1958661 - 1958398 - | 30S ribosomal protein S15 TERM 2677 1958502 - 1958523 + g 71 -2.1 -5.48787 | CAACCATCATTAAAA GACCTCTTC TTGA GTGGTGGTC TTTTTTGTGTGTTCT ribC 1959706 - 1958777 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 2678 1958838 - 1958860 + g 100 -9.4 -6.0458 | TTAATTAGTTGTTCT TTTAATTCTT CTA AAGAATTAAA TTTTTTTTCATTTCT truB 1960594 - 1959710 - | tRNA pseudouridine synthase B TERM 2679 1960031 - 1960043 + g 72 -6.3 -4.32046 | CTCTAAGGCAGTCAT TGTTG CTC CAACA TTTAATTTTTCACCA CPE1684 1961551 - 1960598 - | DHH subfamily 1 protein rbfA 1961905 - 1961555 - | ribosome-binding factor A infB 1963966 - 1961927 - | translation initiation factor IF-2 CPE1687 1964299 - 1963997 - | hypothetical protein CPE1688 1964558 - 1964292 - | hypothetical protein TERM 2680 1964335 - 1964355 + g 72 -2.6 -5.37171 | CTATCATAGACTTCA TCTCCAAT GTTAG ATTGAAGA TTTTTATTTAATCTT nusA 1965686 - 1964586 - | transcription elongation factor NusA TERM 2681 1964838 - 1964852 + g 78 -6.4 -4.84914 | overlap 1964830 TTCTATATACTCAGA TGGAGT ATT GCTCCA TTTTATTATATCAAT CPE1690 1966170 - 1965706 - | hypothetical protein TERM 2682 1966143 - 1966161 + g 73 -3.8 -5.33848 | overlap 1966146 CACAAAGTGCTTCAA GATCAGCT ACA AGTTGTTC TTTTTTCATTATACT TERM 2683 1966287 - 1966266 - R 89 -8.8 -4.67755 | ATAGGTATGCAAAAA CGCAACTT TATTCT AAGTTGCG TTACAAATAGAAAGA polC 1970752 - 1966403 - | DNA polymerase III PolC TERM 2684 1966960 - 1966976 + g 70 -3.7 -5.06505 | opp_overlap 1966960 1966962, overlap 1966962 TTTTACAAGATTCAA TATACCA ATC TGGTACA TTTTTCTCTCTCATT TERM 2685 1968877 - 1968901 + g 74 -8.7 -3.30418 | overlap 1968872 CTAATATTATTATGT GATGTAGAGGA AGT TTCTTTACATC TATATTTGATAAATA TERM 2686 1969448 - 1969424 - G 70 -8.7 -2.61831 | opp_overlap 1969418, overlap 1969423 1969422 TTTACTTGAAAAACC TGTGGTTTCTA TAT CAAAAACCACA TACTCATCATCAAAA TERM 2687 1970827 - 1970800 - R 89 -12.2 -2.85668 | opp_overlap 1970798 1970804 1970807, overlap 1970804 1970807 TATCCCTATACGACA TAAAGAAGGGAT ATTA ATCCCTCCTTTA AATTATATTGTTTCT TERM 2688 1970823 - 1970804 - R 79 -8.6 -4.11404 | opp_overlap 1970804 1970798 1970807, overlap 1970800 1970807 CCTATACGACATAAA GAAGGGAT ATTA ATCCCTCC TTTAAATTATATTGT TERM 2689 1970820 - 1970807 - R 71 -6.7 -4.17416 | opp_overlap 1970804 1970798 1970807, overlap 1970804 1970800 ATACGACATAAAGAA GGGAT ATTA ATCCC TCCTTTAAATTATAT ispG 1971879 - 1970830 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2690 1971496 - 1971511 + g 85 -2.6 -5.95539 | opp_overlap 1971492, overlap 1971494 CCCTGAGTTAACCCC TATTCT TATA GGAATA TTTTTTTCTTTACAA CPE1693 1972906 - 1971899 - | hypothetical protein CPE1694 1974072 - 1972918 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 2691 1973043 - 1973053 + g 75 -4 -5.27938 | TCTCTGGTATTTGCA GATA TGT TATC TTTTTATTTAGGAAT TERM 2692 1974409 - 1974395 - R 73 -4.4 -5.13648 | opp_overlap 1974395 1974406 TAAATATAAATAAAA TTTTTT ATA AAAAAA ATGCTTTAGAAAATC TERM 2693 1974431 - 1974411 - R 100 -11.3 -5.93809 | opp_overlap 1974406 TTTTTATAAAAAAAA TGCTTTAGA AAA TCTAAAGCA TTAAAATTTTAAGAC cdsA 1975226 - 1974432 - | phosphatidate cytidylyltransferase uppS 1976005 - 1975244 - | undecaprenyl diphosphate synthase TERM 2694 1975682 - 1975698 + g 85 -8.1 -4.47686 | overlap 1975686 TACCCTTACTCCGTT TTGATGA AGT TCATCAA TTTCATTTTTTATAA TERM 2695 1975686 - 1975703 + g 73 -3.5 -5.31456 | overlap 1975682 CTTACTCCGTTTTGA TGAAGTT CATC AATTTCA TTTTTTATAAATTCA TERM 2696 1976008 - 1975998 - G 82 -4 -5.52384 | overlap 1976007 TTTTTACTAAAAAAA TCTA ACA TAGA AGGTTCCTCCTTATA TERM 2697 1976067 - 1976038 - R 100 -15.3 -4.56093 | opp_overlap 1976045, overlap 1976045 AATTCAATTATAAAA TAAAAAACCTGCT AAAG AGCAGGTTTTTTA AATTAAATTGACATA TERM 2698 1976060 - 1976045 - R 100 -9 -5.86976 | opp_overlap 1976045, overlap 1976038 TTATAAAATAAAAAA CCTGCT AAAG AGCAGG TTTTTTAAATTAAAT TERM 2699 1976045 - 1976060 + r 100 -9 -5.16572 | opp_overlap 1976045 1976038 TTATAAAATAAAAAA CCTGCT AAAG AGCAGG TTTTTTAAATTAAAT frr 1976627 - 1976070 - | ribosome recycling factor pyrH 1977354 - 1976641 - | uridylate kinase TERM 2700 1976804 - 1976820 + g 70 -3.8 -5.06451 | opp_overlap 1976806 TCAAGTACTTCTATA TATGAT AATTC ATCATA TTTTTTAGCATCATC TERM 2701 1977412 - 1977446 + r 93 -10.2 -4.17316 | opp_overlap 1977420, overlap 1977415 1977420 TTTATATCTATATTC TAAAAAAAGAGAACAC AAT GTGTTCTCTTATGTTA TTATTTTCCGCCCAT TERM 2702 1977415 - 1977443 + r 78 -7.5 -4.20868 | opp_overlap 1977420, overlap 1977412 1977420 ATATCTATATTCTAA AAAAAGAGAACAC AAT GTGTTCTCTTATG TTATTATTTTCCGCC TERM 2703 1977438 - 1977420 - R 100 -11.8 -5.45726 | opp_overlap 1977415 1977412 1977420 TATATTCTAAAAAAA GAGAACAC AAT GTGTTCTC TTATGTTATTATTTT TERM 2704 1977420 - 1977438 + r 100 -11.8 -3.94411 | opp_overlap 1977420, overlap 1977415 1977412 TATATTCTAAAAAAA GAGAACAC AAT GTGTTCTC TTATGTTATTATTTT tsf 1978358 - 1977447 - | elongation factor Ts TERM 2705 1977473 - 1977483 + g 76 -5.4 -5.10765 | overlap 1977480 CCATTTTAGCTACTT CTTC AGC GAAG TTTTCTTCTTTCTTT TERM 2706 1978422 - 1978382 - R 87 -11.4 -3.09516 | opp_overlap 1978382 1978388, overlap 1978388 CTCCTGACTATTTAA TTAAAAGGTAAACGAAGC AGAGA GCTTCATCTACCTTTTCA GTATTTATCTTAATA TERM 2707 1978388 - 1978416 + r 70 -6 -4.33907 | opp_overlap 1978382 1978388, overlap 1978382 ACTATTTAATTAAAA GGTAAACGAAGC AGAGA GCTTCATCTACC TTTTCAGTATTTATC TERM 2708 1978416 - 1978388 - R 100 -10.4 -4.43879 | opp_overlap 1978388 1978382, overlap 1978382 ACTATTTAATTAAAA GGTAAACGAAGC AGAGA GCTTCATCTACC TTTTCAGTATTTATC rpsB 1979139 - 1978438 - | 30S ribosomal protein S2 TERM 2709 1979515 - 1979489 - R 100 -8.1 -5.36441 | TTGTTATATAAAAAA GAAGAAGATGC AAAAA ACACCTTCTTC AAATATTATTTTATC CPE1701 1980297 - 1979521 - | transcriptional repressor CodY TERM 2710 1979940 - 1979966 + g 82 -5.2 -5.43866 | opp_overlap 1979946, overlap 1979943 CTAATCTATCTCCAT TACCAACTATAG GAA CAATAGTTGATA TTTTTTTAGAGATTA TERM 2711 1980236 - 1980246 + g 74 -5.4 -4.87273 | overlap 1980245 CCAAAAGCTATAGCT TCAG TAC CTGA TTTTTGTAAAATCTT topA 1982541 - 1980439 - | DNA topoisomerase I TERM 2712 1981784 - 1981812 + g 81 -2.6 -5.82172 | gap 1, overlap 1981776 GTACTTGTAGTAAAA GGAGCTAAAGGAT TTTT ATT-TTTAGTTCC TTTTTTTATCTTGCT TERM 2713 1982566 - 1982548 - R 75 -8.2 -3.61178 | opp_overlap 1982548, overlap 1982564 TTGACCCATCGTAAA CTCTGAAT TAA ATCCAGAG TGTTCACCCCCTCAA smf 1983668 - 1982586 - | DNA protecting protein DprA comM 1985192 - 1983669 - | Mg chelatase-like protein TERM 2714 1985534 - 1985488 - g 100 -11.1 -4.96646 | gap 1 TTATAGAAGTAAAAA GCAGGTTTTCTAACTCCTTTGG TAAT CCAAAAGAATCAGTAA-CCTGC TCTAAACAACGTAGA CPE1705 1985322 - 1985690 + | hypothetical protein rnhB 1986509 - 1985691 - | ribonuclease HII rbgA 1987370 - 1986525 - | ribosomal biogenesis GTPase TERM 2715 1987476 - 1987510 + r 81 -8.7 -3.83724 | opp_overlap 1987464 1987483, overlap 1987482 1987483 ATATTTTTATACAAA CAAAAAATGGGACTA TTCAC TAGTCCCAGTTTATG TTTAAATTATCTAGT TERM 2716 1987482 - 1987504 + r 70 -6.3 -4.3665 | opp_overlap 1987483, overlap 1987476 1987483 TTATACAAACAAAAA ATGGGACTA TTCAC TAGTCCCAG TTTATGTTTAAATTA TERM 2717 1987483 - 1987503 + r 85 -9.8 -3.20906 | opp_overlap 1987483, overlap 1987482 1987476 TATACAAACAAAAAA TGGGACTA TTCAC TAGTCCCA GTTTATGTTTAAATT TERM 2718 1987503 - 1987483 - R 100 -9.8 -5.76237 | opp_overlap 1987482 1987476 1987483 TATACAAACAAAAAA TGGGACTA TTCAC TAGTCCCA GTTTATGTTTAAATT rplS 1987864 - 1987517 - | 50S ribosomal protein L19 trmD 1988695 - 1987985 - | tRNA (guanine-N(1)-)-methyltransferase TERM 2719 1988314 - 1988304 - G 70 -5.4 -4.66537 | CCTGTTAACACAAAA TCTC CAA GAGA AATTTCTAAATCAAA rimM 1989182 - 1988685 - | 16S rRNA-processing protein TERM 2720 1989237 - 1989210 - R 77 -7.1 -4.52589 | opp_overlap 1989213, overlap 1989213 TTTCTGTATATAAAA TAAGAGTTAGG TATTCC CCTAACTCTTT TTAAATGATTTCTAC TERM 2721 1989213 - 1989234 + r 89 -8.8 -4.72386 | opp_overlap 1989213 1989210 CTGTATATAAAATAA GAGTTAGG TATTCC CCTAACTC TTTTTAAATGATTTC TERM 2722 1989234 - 1989213 - R 86 -8.8 -4.38141 | opp_overlap 1989213, overlap 1989210 CTGTATATAAAATAA GAGTTAGG TATTCC CCTAACTC TTTTTAAATGATTTC CPE1711 1989465 - 1989238 - | hypothetical protein rpsP 1989754 - 1989509 - | 30S ribosomal protein S16 ffh 1991146 - 1989788 - | signal recognition particle protein TERM 2723 1990740 - 1990754 + g 81 -2.8 -5.77734 | opp_overlap 1990740 CTATATATATCACAA GCCA CAAGTAA TGGC TTTTTGTTTTTCTTT CPE1714 1991496 - 1991158 - | hypothetical protein TERM 2724 1991540 - 1991569 + r 100 -9.5 -5.66989 | opp_overlap 1991543 TAACAAATAATTTTA TAAGTGTCAAGTA TTTT TACTTAACACTTA TTTTTTTGATATTTA TERM 2725 1991566 - 1991543 - R 77 -9 -3.4082 | opp_overlap 1991540 CAAATAATTTTATAA GTGTCAAGTA TTTT TACTTAACAC TTATTTTTTTGATAT ftsY 1992587 - 1991673 - | signal recognition particle-docking protein FtsY smc 1996158 - 1992601 - | chromosome segregation protein SMC TERM 2726 1993615 - 1993630 + g 74 -6.2 -4.46675 | overlap 1993623 AAGTTTATTTTCCAC TTCTTC TATA GAAGAA TTTATTCTATTAGCT TERM 2727 1996353 - 1996331 - R 100 -7.7 -5.85737 | ATATCAATAAAAAAA GCCTCAGAG ATCAA CTCCAAGGC ATATAATAACTATAA CPE1717 1997436 - 1996363 - | radical SAM domain protein TERM 2728 1996792 - 1996802 + g 71 -6.8 -3.96999 | opp_overlap 1996790, overlap 1996790 1996791 CTCTAAGTACATATC CTCC ATA GGAG TGTTTTTCACTGTAA rnc 1998128 - 1997415 - | ribonuclease III TERM 2729 1997460 - 1997475 + g 72 -4.6 -4.85396 | ACCTAACCTTTGTAG TGCTGC TTTA GCTGCA TTTTGTTCTGATTCT TERM 2730 1998150 - 1998192 + r 100 -18.2 -3.17723 | ATTCATCTCCTTAAG GTTTATTCTTCAAGTTGTTT GTG AAACAACTTCAAGAATAAAC TTAAATTAAAAATCC TERM 2731 1998204 - 1998222 + r 72 -5.9 -4.38203 | opp_overlap 1998205, overlap 1998205 AAACTTAAATTAAAA ATCCCGC TTATT GCGGGAC TTTATTACTTCTCTG TERM 2732 1998221 - 1998205 - R 100 -9.4 -5.01042 | opp_overlap 1998205 1998204 AACTTAAATTAAAAA TCCCGC TTATT GCGGGA CTTTATTACTTCTCT TERM 2733 1998205 - 1998221 + r 80 -9.4 -3.21837 | opp_overlap 1998205, overlap 1998204 AACTTAAATTAAAAA TCCCGC TTATT GCGGGA CTTTATTACTTCTCT acpA 1998457 - 1998227 - | acyl carrier protein plsX 1999166 - 1998534 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 2734 1998699 - 1998711 + gr 72 -7.7 -3.64882 | opp_overlap 1998699, overlap 1998697 CTTTACACCTAAAAA TGGTG CTC CACCA TATTCTTTATAATCC TERM 2735 1998711 - 1998699 - GR 85 -7.7 -4.70659 | opp_overlap 1998699 1998697 CTTTACACCTAAAAA TGGTG CTC CACCA TATTCTTTATAATCC plsX 1999504 - 1999139 - | fatty acid/phospholipid synthesis protein TERM 2736 1999615 - 1999588 - R 79 -8.6 -4.12532 | opp_overlap 1999588 1999593, overlap 1999593 TTTCCTATATATAAA GAAAAGAAAGTC ATAA GACTTTCTTTTA TTCTTCAACTGATAC TERM 2737 1999588 - 1999615 + r 76 -8.6 -3.66018 | opp_overlap 1999588 1999593, overlap 1999593 TTTCCTATATATAAA GAAAAGAAAGTC ATAA GACTTTCTTTTA TTCTTCAACTGATAC TERM 2738 1999593 - 1999610 + r 88 -8.5 -4.90079 | opp_overlap 1999588 1999593, overlap 1999588 TATATATAAAGAAAA GAAAGTC ATAA GACTTTC TTTTATTCTTCAACT TERM 2739 1999610 - 1999593 - R 91 -8.5 -5.07523 | opp_overlap 1999593 1999588, overlap 1999588 TATATATAAAGAAAA GAAAGTC ATAA GACTTTC TTTTATTCTTCAACT rpmF 1999795 - 1999613 - | 50S ribosomal protein L32 CPE1723 2000206 - 1999811 - | hypothetical protein TERM 2740 2000242 - 2000265 + r 71 -5.4 -4.55887 | opp_overlap 2000242 AGCTTTTTAAATCCA GAACAAAATC TAAA GATTTTCTTC TTTCTCTTTTTGAGC TERM 2741 2000346 - 2000385 + r 84 -9.6 -3.69256 | opp_overlap 2000346 2000349 2000379, overlap 2000349 TCACGCTCCTTAACA TAAGATATGCATTGTTTA TTCC TAAACAACACATATCTTA TTATATTAACTAGAT TERM 2742 2000385 - 2000346 - R 100 -14 -3.02144 | opp_overlap 2000346 2000349, overlap 2000349 2000379 TCACGCTCCTTAACA TAAGATATGCATTGTTTA TTCC TAAACAACACATATCTTA TTATATTAACTAGAT TERM 2743 2000382 - 2000349 - R 95 -11.3 -3.65812 | opp_overlap 2000346 2000349, overlap 2000346 2000379 CGCTCCTTAACATAA GATATGCATTGTTTA TTCC TAAACAACACATATC TTATTATATTAACTA ackB 2001621 - 2000425 - | acetate kinase TERM 2744 2001214 - 2001226 + g 72 -6.3 -4.34759 | opp_overlap 2001214, overlap 2001206 AACATTTGGCATTAA TGCTT TAC AAGCA TTTATTCCTATTATA eutD 2002719 - 2001712 - | phosphotransacetylase CPE1726 2003056 - 2004156 + | hypothetical protein TERM 2745 2004189 - 2004230 + F 81 -5.4 -5.34655 | opp_overlap 2004189 TTACTTAAATATAAA TACTATATATGATTTCGT AAAAGG AGGAAACCATGTATAGTA TTTTATTTTTACTTA TERM 2746 2004806 - 2004775 - g 86 -7.5 -5.01845 | opp_overlap 2004783, overlap 2004783 TATAATAACTAAAAA TAAAAAAAGAGAG AAAAAA CTCTCTCTTTCTA AAGAAGTCATTACTG TERM 2747 2004800 - 2004783 - g 95 -6.3 -6.20267 | opp_overlap 2004783, overlap 2004775 CTAAAAATAAAAAAA GAGAGAA AAAA CTCTCTC TTTCTAAAGAAGTCA CPE1727 2004221 - 2005381 + | hypothetical protein CPE1728 2005894 - 2005364 - | hypothetical protein coaD 2006397 - 2005903 - | pantetheine-phosphate adenylyltransferase TERM 2748 2005957 - 2005969 + g 81 -2.7 -5.72622 | overlap 2005958 ATCCTCTACTATCTC TTTTG GAA CAAAG TTTTTTATTTCTCCA CPE1730 2006956 - 2006399 - | hypothetical protein TERM 2749 2006531 - 2006553 + g 70 -6.4 -4.16301 | TATTAACCCATCTTC TTGAAGTAAA TTC TTTTCTTCAA TTATTTCTATAGCTT recG 2009093 - 2007021 - | ATP-dependent DNA helicase RecG TERM 2750 2009182 - 2009140 - R 95 -10.2 -4.28049 | opp_overlap 2009145 CTTAAAATTGCAAAA TTAAAGGATTATAACCATAA AAC TTATAGCTATAACCCTATAA TAAAATTTCTATTCA CPE1732 2010892 - 2009246 - | DAK2 domain protein CPE1733 2011253 - 2010906 - | hypothetical protein TERM 2751 2011476 - 2011492 + H 79 -8.1 -4.08394 | TATTATCTGTCCTAT TGAAGAT TTT ATCTTCA TTTTAAAGGAGGTGT TERM 2752 2011738 - 2011721 - g 81 -8.5 -4.08064 | opp_overlap 2011721 AATCTTTGGCTAAAA TGCAGTT TAAT AACTGCA TTTTTATTTTGCATA TERM 2753 2011721 - 2011738 + G 95 -8.5 -5.48213 | opp_overlap 2011721 AATCTTTGGCTAAAA TGCAGTT TAAT AACTGCA TTTTTATTTTGCATA rpmB 2011513 - 2011767 + | 50S ribosomal protein L28 TERM 2754 2011757 - 2011785 + T 100 -11.9 -5.17054 | opp_overlap 2011758, overlap 2011758 2011761 TTATTTTGCATAAAA ATAAGGGATAAGT TTT ACTTATCCCTTAA TTTTTTCCATCTTAT TERM 2755 2011758 - 2011784 + T 100 -15.4 -3.68606 | opp_overlap 2011758, overlap 2011757 2011761 TATTTTGCATAAAAA TAAGGGATAAGT TTT ACTTATCCCTTA ATTTTTTCCATCTTA TERM 2756 2011784 - 2011758 - T 100 -15.4 -4.83615 | opp_overlap 2011757 2011758 2011761 TATTTTGCATAAAAA TAAGGGATAAGT TTT ACTTATCCCTTA ATTTTTTCCATCTTA TERM 2757 2011761 - 2011781 + T 100 -12.7 -3.94773 | opp_overlap 2011758, overlap 2011758 2011757 TTTGCATAAAAATAA GGGATAAGT TTT ACTTATCCC TTAATTTTTTCCATC CPE1735 2012575 - 2011946 - | thiamine pyrophosphokinase CPE1736 2013230 - 2012577 - | ribulose-phosphate 3-epimerase CPE1737 2014093 - 2013230 - | ribosome-associated GTPase TERM 2758 2014245 - 2014286 + r 100 -7.5 -5.38054 | opp_overlap 2014248 2014253 2014258, overlap 2014246 2014258 CTTATTTATTTGACT ATATAAAATAAAAGGGAGT ATTA ACTCCCTTTTACCTTATAA TTTTTATTTCTAAAA TERM 2759 2014246 - 2014285 + r 95 -11 -3.81748 | opp_overlap 2014248 2014253 2014258, overlap 2014245 2014258 TTATTTATTTGACTA TATAAAATAAAAGGGAGT ATTA ACTCCCTTTTACCTTATA ATTTTTATTTCTAAA TERM 2760 2014283 - 2014248 - R 93 -13.6 -2.79915 | opp_overlap 2014246 2014245 2014258, overlap 2014253 2014258 ATTTATTTGACTATA TAAAATAAAAGGGAGT ATTA ACTCCCTTTTACCTTA TAATTTTTATTTCTA TERM 2761 2014278 - 2014253 - R 100 -13.5 -4.57353 | opp_overlap 2014246 2014245 2014258, overlap 2014248 2014258 TTTGACTATATAAAA TAAAAGGGAGT ATTA ACTCCCTTTTA CCTTATAATTTTTAT TERM 2762 2014258 - 2014273 + r 84 -9 -4.33754 | opp_overlap 2014258 2014253 2014248, overlap 2014246 2014245 CTATATAAAATAAAA GGGAGT ATTA ACTCCC TTTTACCTTATAATT TERM 2763 2014273 - 2014258 - R 100 -9 -5.23292 | opp_overlap 2014246 2014245 2014258, overlap 2014253 2014248 CTATATAAAATAAAA GGGAGT ATTA ACTCCC TTTTACCTTATAATT CPE1738 2016387 - 2014330 - | pobable serine/threonine protein kinase CPE1739 2017108 - 2016389 - | protein phosphatase 2C family protein TERM 2764 2016699 - 2016724 + g 86 -3.3 -5.83226 | overlap 2016703 CTATCAACAAGTTCT TGAACTAAGGA ATGA TCCTTTGTTAA TTTTTTTATTCCATT CPE1740 2018164 - 2017121 - | radical SAM enzyme, Cfr family TERM 2765 2017916 - 2017926 + g 74 -5.4 -4.91511 | opp_overlap 2017916 GTTTCCATCACCTAA TCCT AAA AGGA TTTTTCTAGTACCAT CPE1741 2019524 - 2018196 - | RNA-binding Sun protein CPE1742 2020230 - 2019535 - | hypothetical protein fmt 2021177 - 2020248 - | methionyl-tRNA formyltransferase def 2021640 - 2021197 - | polypeptide deformylase CPE1745 2023849 - 2021654 - | primosome assembly protein PriA TERM 2766 2023901 - 2023875 - R 95 -11.7 -3.58726 | opp_overlap 2023875 2023880 2023881, overlap 2023881 CTTGTTCATATAGAA TAAAAAGGCGC AATTA GCGCCCTTTTA TAATGTCAAATATAT TERM 2767 2023875 - 2023901 + r 75 -9.5 -2.64422 | opp_overlap 2023875 2023881, overlap 2023880 2023881 CTTGTTCATATAGAA TAAAAAGGCGC AATTA GCGCCCTTTTA TAATGTCAAATATAT TERM 2768 2023881 - 2023895 + r 74 -8.5 -3.30104 | opp_overlap 2023875 2023881, overlap 2023880 2023875 CATATAGAATAAAAA GGCGC AATTA GCGCC CTTTTATAATGTCAA TERM 2769 2023895 - 2023881 - R 95 -8.5 -5.27206 | opp_overlap 2023881 2023880 2023875, overlap 2023875 CATATAGAATAAAAA GGCGC AATTA GCGCC CTTTTATAATGTCAA CPE1746 2025075 - 2023888 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase rpoZ 2025293 - 2025081 - | DNA-directed RNA polymerase subunit omega gmk 2025933 - 2025274 - | guanylate kinase CPE1749 2026183 - 2025914 - | hypothetical protein CPE1750 2027081 - 2026197 - | hypothetical protein TERM 2770 2026888 - 2026870 - G 71 -7.6 -3.41051 | TGATTTTTAGCATAA TCTTTATA ATT TATAAAGA TATCAACTTTTCCCC TERM 2771 2026915 - 2026933 + g 78 -3.2 -5.55769 | opp_overlap 2026918, overlap 2026918 CCCCTGCTAAGTTTA GAAGAAAT AAT ATTTCTTA TTTTTTCTTCTAAAG TERM 2772 2026918 - 2026930 + g 71 -4.9 -4.84921 | opp_overlap 2026918, overlap 2026915 CTGCTAAGTTTAGAA GAAAT AAT ATTTC TTATTTTTTCTTCTA TERM 2773 2027217 - 2027203 - R 76 -4.3 -5.36441 | CTTCTACATAAAAAA GACTT TACCT AAGTC TCAAATTATTTTTTA CPE1751 2028698 - 2027301 - | hypothetical protein TERM 2774 2028771 - 2028741 - R 100 -15.8 -5.59879 | opp_overlap 2028741, overlap 2028770 CATAAATATAAAAAA GCTATTTTAAGTTT AGT AAACTTAAAATAGC TTTTATCCAATTATT TERM 2775 2028741 - 2028771 + r 100 -15.8 -4.44461 | opp_overlap 2028741 2028770 CATAAATATAAAAAA GCTATTTTAAGTTT AGT AAACTTAAAATAGC TTTTATCCAATTATT TERM 2776 2028905 - 2028924 + r 73 -2.2 -5.70522 | opp_overlap 2028904, overlap 2028904 ACTATTCTAAGTTAT TATTCAAT AATT ATCGAATA TTTTTTATTATTATT ansA 2029939 - 2028956 - | L-asparaginase TERM 2777 2029238 - 2029252 + g 85 -5.8 -5.4251 | TCCTAAAGCTTCTAT TATGAT TCC ATCATA TTTTTTCTCTATACA TERM 2778 2030277 - 2030234 - R 100 -9.9 -4.7373 | opp_overlap 2030235 2030241, overlap 2030235 2030241 TTACTTCATTAAAAA TTTAAAAGACCATATCAAA ATAAAA TTTGATATGGTCTTTGAAT ATATTAATCACCTTA TERM 2779 2030235 - 2030276 + r 100 -13.4 -3.13639 | opp_overlap 2030234 2030235 2030241, overlap 2030241 TACTTCATTAAAAAT TTAAAAGACCATATCAAA ATAAAA TTTGATATGGTCTTTGAA TATATTAATCACCTT TERM 2780 2030276 - 2030235 - R 100 -13.4 -3.43756 | opp_overlap 2030235 2030241, overlap 2030234 2030241 TACTTCATTAAAAAT TTAAAAGACCATATCAAA ATAAAA TTTGATATGGTCTTTGAA TATATTAATCACCTT TERM 2781 2030241 - 2030270 + r 95 -12.4 -3.77177 | opp_overlap 2030241 2030235 2030234, overlap 2030235 ATTAAAAATTTAAAA GACCATATCAAA ATAAAA TTTGATATGGTC TTTGAATATATTAAT TERM 2782 2030270 - 2030241 - R 100 -12.4 -4.49644 | opp_overlap 2030235 2030241, overlap 2030235 2030234 ATTAAAAATTTAAAA GACCATATCAAA ATAAAA TTTGATATGGTC TTTGAATATATTAAT spoIVA 2031765 - 2030290 - | stage IV sporulation protein A TERM 2783 2031953 - 2031967 + r 82 -4.4 -5.8096 | AATCTAAATTAATGC TATTTA TTT TAAATA TTTTTATTTTTTATA TERM 2784 2032085 - 2032052 - R 100 -11.3 -4.41494 | opp_overlap 2032046 2032058, overlap 2032058 CACTTTTAATTAAAA TAAAAAGAGATAGAA AATT TTCTATCTCTTTTAA ATCAAATTTTATATT TERM 2785 2032058 - 2032079 + r 95 -10.3 -4.20106 | opp_overlap 2032058 2032052, overlap 2032046 TAATTAAAATAAAAA GAGATAGAA AATT TTCTATCTC TTTTAAATCAAATTT TERM 2786 2032079 - 2032058 - R 100 -10.3 -5.54338 | opp_overlap 2032046 2032058, overlap 2032052 TAATTAAAATAAAAA GAGATAGAA AATT TTCTATCTC TTTTAAATCAAATTT gpsA 2033089 - 2032094 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase engA 2034410 - 2033094 - | GTP-binding protein EngA TERM 2787 2033251 - 2033226 - G 74 -6.1 -4.42743 | TACAAAGAACACAAA CTTAGGTGGCT TTGT AGCAACCTGAG TAGCATAGTATATTT CPE1756 2035750 - 2034413 - | hypothetical protein TERM 2788 2035571 - 2035588 + g 73 -5.6 -4.53036 | TTCTATTTCAAATTC CCAAAC CTCTTT GTTTGG TTTTAATATTTCTAC TERM 2789 2035971 - 2035925 - R 90 -9.9 -3.6608 | gap 1, opp_overlap 2035928 2035934, overlap 2035934 ACTATGTTATTTAAA TATTAAAAAGTAATCCCCTAAA CAAA TTTTGAGGATTAC-TTTTAATA GCTTTCTCTTAATTC TERM 2790 2035934 - 2035963 + r 73 -6.5 -4.33767 | opp_overlap 2035934 2035925, overlap 2035928 TTTAAATATTAAAAA GTAATCCCCTAAA CAAA TTTTGAGGATTAC TTTTAATAGCTTTCT TERM 2791 2035963 - 2035934 - R 100 -8.7 -4.93696 | opp_overlap 2035928 2035934, overlap 2035925 TTTAAATATTAAAAA GTAATCCCCTAAA CAAA TTTTGAGGATTAC TTTTAATAGCTTTCT CPE1757 2037792 - 2036077 - | sensory box histidine kinase TERM 2792 2037052 - 2037075 + g 81 -8.2 -4.05714 | opp_overlap 2037057, overlap 2037042 2037057 ACTACCCATACTTTT CAATATGGCT TCTA AGCCATTTTG TTTATCCTTAAACCT TERM 2793 2037057 - 2037070 + g 83 -6.7 -5.04733 | opp_overlap 2037057, overlap 2037042 2037052 CCATACTTTTCAATA TGGCT TCTA AGCCA TTTTGTTTATCCTTA CPE1758 2038510 - 2037806 - | hypothetical protein TERM 2794 2038669 - 2038640 - R 100 -13.1 -5.88476 | opp_overlap 2038644 2038659 AAAACAAATAAAAAA GCCATCTTAAAGA ACTC TCTTTAAGATAGC TTAAAATTATTTCAT TERM 2795 2038644 - 2038665 + r 72 -8.9 -2.55818 | opp_overlap 2038640, overlap 2038659 CAAATAAAAAAGCCA TCTTAAAGA ACTC TCTTTAAGA TAGCTTAAAATTATT CPE1759 2039125 - 2038676 - | transcriptional regulator NrdR CPE1760 2039459 - 2039187 - | hypothetical protein TERM 2796 2039602 - 2039583 - R 100 -10.8 -5.28176 | opp_overlap 2039587 TTTATCCATAAAAAA TAGAGCTC AAAA GAGCTCTA TACATACTTCCTCAT sigG 2040412 - 2039600 - | sporulation sigma factor SigG sigE 2041155 - 2040448 - | sporulation sigma factor SigE spoIIGA 2041975 - 2041169 - | sporulation factor SpoIIGA CPE1764 2042207 - 2042013 - | hypothetical protein TERM 2797 2042373 - 2042322 - R 100 -14.2 -2.93853 | opp_overlap 2042328 2042333, overlap 2042328 2042333 TTTTTCTAATTAAAG TAAAAATAAAAGCACTTATAGTAA TTAA TTACCATAAGTGCTTTTCTATTTA AAAATACTATCTTCT TERM 2798 2042367 - 2042328 - R 100 -13.2 -5.04222 | opp_overlap 2042328 2042333, overlap 2042322 2042333 TAATTAAAGTAAAAA TAAAAGCACTTATAGTAA TTAA TTACCATAAGTGCTTTTC TATTTAAAAATACTA TERM 2799 2042328 - 2042367 + r 93 -11 -3.36991 | opp_overlap 2042328 2042322 2042333, overlap 2042333 TAATTAAAGTAAAAA TAAAAGCACTTATAGTAA TTAA TTACCATAAGTGCTTTTC TATTTAAAAATACTA TERM 2800 2042362 - 2042333 - R 100 -13.1 -5.36689 | opp_overlap 2042328 2042333, overlap 2042328 2042322 AAAGTAAAAATAAAA GCACTTATAGTAA TTAA TTACCATAAGTGC TTTTCTATTTAAAAA TERM 2801 2042333 - 2042362 + r 100 -10.9 -4.78848 | opp_overlap 2042333 2042328 2042322, overlap 2042328 AAAGTAAAAATAAAA GCACTTATAGTAA TTAA TTACCATAAGTGC TTTTCTATTTAAAAA ftsZ 2043525 - 2042380 - | cell division protein FtsZ TERM 2802 2043251 - 2043231 - G 81 -9.1 -3.55824 | opp_overlap 2043230 2043244, overlap 2043229 CAGCAGTTATAAATA CCATATCAG CTC CTGATATAG CCTCTGTTATTTCAT ftsA 2044777 - 2043539 - | cell division protein FtsA TERM 2803 2044184 - 2044205 + g 81 -7.5 -4.66163 | AACATTTGAAGTTTC TGTTTTTTT ACTT AAAAAAACA TTTTTAAATCCAAAT pilT 2045907 - 2044855 - | twitching motility protein PilT TERM 2804 2045985 - 2045928 - R 100 -13.4 -3.27525 | gap 1, opp_overlap 2045939 2045942, overlap 2045924 2045939 2045942 TCCTCCTAAACTTAA TTCTT-AATAAATAATTTGTTCACTTC ATAAA GAAATGAACAAATTATTTATAGAAGAA TCCACCTTTTTTATC TERM 2805 2045939 - 2045973 + r 95 -10.3 -3.86346 | opp_overlap 2045928 2045939 2045942, overlap 2045942 TTAATTCTTAATAAA TAATTTGTTCACTTC ATAAA GAAATGAACAAATTA TTTATAGAAGAATCC TERM 2806 2045973 - 2045939 - R 100 -12.5 -4.183 | opp_overlap 2045939 2045942, overlap 2045928 2045942 TTAATTCTTAATAAA TAATTTGTTCACTTC ATAAA GAAATGAACAAATTA TTTATAGAAGAATCC TERM 2807 2045942 - 2045970 + r 77 -7.6 -4.06419 | opp_overlap 2045939 2045928 2045942, overlap 2045939 ATTCTTAATAAATAA TTTGTTCACTTC ATAAA GAAATGAACAAA TTATTTATAGAAGAA TERM 2808 2045970 - 2045942 - R 95 -9.8 -4.20768 | opp_overlap 2045942 2045939, overlap 2045939 2045928 ATTCTTAATAAATAA TTTGTTCACTTC ATAAA GAAATGAACAAA TTATTTATAGAAGAA sigK 2046789 - 2046088 - | sporulation sigma factor SigK spoVD 2048519 - 2046852 - | stage V sporulation protein D TERM 2809 2048561 - 2048525 - R 100 -9.6 -5.19879 | gap 2, opp_overlap 2048525 2048520 TGTTAAACATAAAAA CACCCCT--CCTGGCTAA ATT CTAGCCAAGTTAGGGGTG TTTTATTCAATAAGA TERM 2810 2048525 - 2048561 + r 77 -6.7 -4.67982 | gap 2, opp_overlap 2048525, overlap 2048520 TGTTAAACATAAAAA CACCCCT--CCTGGCTA AATTC TAGCCAAGTTAGGGGTG TTTTATTCAATAAGA CPE1770 2049258 - 2048632 - | uridine kinase CPE1771 2050487 - 2049258 - | peptidase, U32 family CPE1772 2051137 - 2050493 - | O-methyltransferase family protein TERM 2811 2050594 - 2050605 + g 71 -3 -5.29716 | ACTTTCTCATTCTCT TAAC AATA GTTA TTTTTCTTCTCTTCA CPE1773 2052181 - 2051153 - | hypothetical protein TERM 2812 2052202 - 2052233 + r 79 -8.9 -3.48994 | opp_overlap 2052207 2052211, overlap 2052205 2052211 TACCCCCTCATATTT TAAGATAAATGGC CATAAA GCCATTTATCTAA TTATAAATCTTTTTC TERM 2813 2052205 - 2052230 + r 82 -10.6 -2.86828 | opp_overlap 2052207 2052211, overlap 2052202 2052211 CCCCTCATATTTTAA GATAAATGGC CATAAA GCCATTTATC TAATTATAAATCTTT TERM 2814 2052228 - 2052207 - R 71 -8.1 -3.07962 | opp_overlap 2052205 2052202 2052211, overlap 2052211 CCTCATATTTTAAGA TAAATGGCC ATAA AGCCATTTA TCTAATTATAAATCT typA 2054156 - 2052324 - | GTP-binding protein TypA TERM 2815 2054192 - 2054214 + r 72 -4.9 -4.94962 | opp_overlap 2054192, overlap 2054169 2054187 TATGTGCATAAAAAA TTGGATACT ATTTA AGTACCCAA TTTTCTTTACCTTAT TERM 2816 2054214 - 2054192 - R 87 -7.1 -5.252 | opp_overlap 2054169 2054187 2054192 TATGTGCATAAAAAA TTGGATACT ATTTA AGTACCCAA TTTTCTTTACCTTAT CPE1775 2056058 - 2054313 - | hypothetical protein TERM 2817 2054534 - 2054551 + g 73 -5.5 -4.67048 | ATATAATATCTGGTC CTGCTAC CACT GAAGCAG TTTCTTTTGAAATAG TERM 2818 2056034 - 2056024 - G 76 -6.8 -4.42386 | opp_overlap 2056023 2056024 2056024 2056028 CGCTTATGTATAAAA GAGG TTT CCTC ATTTGAGAAAATTTC CPE1776 2056503 - 2056051 - | FUR family transcriptional regulator CPE1777 2056778 - 2056524 - | hypothetical protein CPE1778 2057207 - 2056794 - | Holliday junction resolvase-like protein TERM 2819 2056835 - 2056855 + g 100 -2.5 -6.34616 | opp_overlap 2056835 2056837 CTTGTAATATATAAG TAGCCGCTA TTT TATCGACTA TTTTTTTTCTTTTCG TERM 2820 2057231 - 2057250 + r 86 -7.8 -4.73973 | opp_overlap 2057231 CTTACATAAACGAAA GAGTACCC TTTC GGGCACTC TTTGTTATTTTATCT TERM 2821 2057250 - 2057231 - R 93 -10 -4.18042 | opp_overlap 2057231 CTTACATAAACGAAA GAGTACCC TTTC GGGCACTC TTTGTTATTTTATCT CPE1779 2057512 - 2057255 - | hypothetical protein TERM 2822 2057533 - 2057518 - R 72 -9 -2.5474 | overlap 2057517 2057515 TGTTACTCATAACAT GCTGCT TACT AGCAGC TCACCCCCTTACAGT alaS 2060295 - 2057656 - | alanyl-tRNA synthetase CPE1781 2061925 - 2060888 - | hypothetical protein TERM 2823 2061222 - 2061209 - G 78 -6.7 -4.68424 | overlap 2061198 TAACGCATTTAAAAA CGCTA ATAA TAGCG GAAACTTTATTCCTA TERM 2824 2061719 - 2061731 + g 70 -3.5 -5.11254 | TACTATAGCCATAGC TAAAA AGT TTTTA TTTATTTTTGTTCTT CPE1782 2062424 - 2061951 - | PRC-barrel domain protein TERM 2825 2062691 - 2062706 + r 70 -6 -4.20368 | opp_overlap 2062691, overlap 2062699 TATAAAAGAAAAAAA GCCCCC TTTC GGGAGC TTTCTATTAAAGTAG TERM 2826 2062706 - 2062691 - R 100 -8.2 -6.14618 | opp_overlap 2062691 2062699 TATAAAAGAAAAAAA GCCCCC TTTC GGGAGC TTTCTATTAAAGTAG trmU 2063765 - 2062713 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2827 2063768 - 2063729 - G 100 -10.8 -4.07568 | gap 1 CCTGTTCCTTTAAAA GGTAAGCAGCAACGGAGCT ATC AACTCCGCCGCT-CATACC TATAACAACCTTTTT nifU 2064245 - 2063817 - | nitrogen fixation protein nifS 2065444 - 2064248 - | cysteine desulfurase TERM 2828 2065130 - 2065146 + g 70 -3.7 -5.03945 | opp_overlap 2065130 TTGGCAAGTATGTAA TACAGCA TGG TGCTCTA TTTTTGTAGTTATTA CPE1786 2065823 - 2065437 - | hypothetical protein CPE1787 2067255 - 2066029 - | recombination factor protein RarA CPE1788 2068377 - 2067478 - | hypothetical protein TERM 2829 2068545 - 2068521 - R 95 -7.3 -5.9218 | opp_overlap 2068521 TATACAATAAAAAAA GATTCTAATAA AAA CTATTAGAACC TTTCTATTAAAAATT CPE1789 2068991 - 2068563 - | hypothetical protein moaA 2069965 - 2068994 - | molybdenum cofactor biosynthesis protein A TERM 2830 2069772 - 2069782 + g 88 -4 -5.80364 | overlap 2069751 AGAGGCTCACCACCT GTAA GTC TTAC TTTTTTTATTCCAAT CPE1791 2071082 - 2070069 - | molybdopterin biosynthesis protein TERM 2831 2070284 - 2070272 - G 71 -5.5 -4.37734 | TATAATAAGCTAAAA GAAGC ATA GCTCC AGGAAGTACAGGTGA CPE1792 2071749 - 2071201 - | molybdopterin-guanine dinucleotide biosynthesis protein A CPE1793 2073062 - 2071842 - | molybdenum cofactor biosynthesis protein MoeA TERM 2832 2073129 - 2073091 - R 100 -12.8 -5.18371 | opp_overlap 2073091 CTTTATAAAATAAAA TGCTTATTATTTTTGTTA TAC CAACAAGAATAATAAGCA TTAAATTAAATAGTC TERM 2833 2073091 - 2073129 + r 100 -14.3 -3.19668 | opp_overlap 2073091 CTTTATAAAATAAAA TGCTTATTATTTTTGTT ATACC AACAAGAATAATAAGCA TTAAATTAAATAGTC mobB 2073883 - 2073401 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 2834 2073673 - 2073687 + g 71 -7.2 -3.77722 | TTATAAGAGCCATTC TTTCCT TTG AGGAAA TTATTACTGCTTCAG CPE1795 2075197 - 2073974 - | nitrate reductase, NADH oxidase subunit CPE1796 2075612 - 2075199 - | nitrate reductase electron transfer subunit CPE1797 2077703 - 2075625 - | nitrate reductase, catalytic subunit TERM 2835 2076956 - 2076978 + g 76 -9.2 -3.08778 | opp_overlap 2076955, overlap 2076953 TATATTTCTTAACAT GTGCTTTGAA ATC TTCAAAGCCC TCTGTGTAATTATTT TERM 2836 2077607 - 2077621 + g 75 -4.2 -5.20783 | TAACTGGATAATGTG GAGTTG GAA CTACTC TTTTTATCTTTCCAT TERM 2837 2077932 - 2077908 - R 81 -7.2 -4.78572 | opp_overlap 2077908, overlap 2077903 TCTTAACTAAGAAAA GGTACTATGA ATTAA TCCTAGTACC TTTTACTAAAATAAC TERM 2838 2077908 - 2077932 + r 75 -7.2 -4.26903 | opp_overlap 2077908 2077903 TCTTAACTAAGAAAA GGTACTATGA ATTAA TCCTAGTACC TTTTACTAAAATAAC CPE1798 2078418 - 2077990 - | hypothetical protein CPE1799 2079916 - 2078639 - | putative FAD dependent oxidoreductase TERM 2839 2079284 - 2079294 + g 70 -5.4 -4.66535 | overlap 2079288 TTCTTTTCTTATTTC CTCT GAA AGAG TTTCTTTTGCAAGTT CPE1800 2080928 - 2079948 - | hypothetical protein TERM 2840 2080499 - 2080513 + g 70 -3.6 -5.16841 | overlap 2080500 CTTTGACCTCAGTAT TTAAGA GCC TCTTAG TTTTTATTCCTCTAA TERM 2841 2081171 - 2081132 - R 100 -19.8 -6.09196 | opp_overlap 2081132 2081137 TTTAAAACAAAAAAA TCAAAGGTGTTATATTAA AATA TTAATATAACACCTTTGA TTTTAAGAATAATTG TERM 2842 2081132 - 2081171 + r 100 -19.8 -4.12902 | opp_overlap 2081132, overlap 2081137 TTTAAAACAAAAAAA TCAAAGGTGTTATATTAA AATA TTAATATAACACCTTTGA TTTTAAGAATAATTG TERM 2843 2081137 - 2081166 + r 100 -13.9 -4.20136 | opp_overlap 2081132, overlap 2081132 AACAAAAAAATCAAA GGTGTTATATTAA AATA TTAATATAACACC TTTGATTTTAAGAAT dacB 2082049 - 2081174 - | D-alanyl-D-alanine carboxypeptidase TERM 2844 2081592 - 2081572 - G 71 -7.7 -3.42124 | CAAAATCATTCATAA GTATAGAAA AGT TCTCTATAC TACCACCAATATGCT TERM 2845 2082616 - 2082634 + G 74 -7.6 -3.72893 | CACAAGATTGGATTA CTTTTTTA AAC TAAAAAAG TTTACTGGAAACATA CPE1802 2082197 - 2082769 + | hypothetical protein CPE1803 2082816 - 2083235 + | hypothetical protein TERM 2846 2083409 - 2083386 - T 87 -6.8 -5.43553 | ACCTAAAAAATAAAA TTCTTACTTC GCAG GGAGTAAGAA ATAGAAACTTTATAG TERM 2847 2083451 - 2083492 + T 93 -9.8 -4.03413 | gap 1, opp_overlap 2083454 2083456, overlap 2083456 2083459 AATTTGCTATTTAAA TAATAGAAGGTAGAGAATA ATTAA TATTCTCTACCTTCT-TAA TTTATATAAACAAAT TERM 2848 2083490 - 2083454 - T 100 -14 -3.96216 | opp_overlap 2083451 2083456 2083459, overlap 2083456 TTGCTATTTAAATAA TAGAAGGTAGAGAATA ATTAA TATTCTCTACCTTCTT AATTTATATAAACAA TERM 2849 2083456 - 2083488 + T 100 -16.6 -3.65294 | opp_overlap 2083454 2083456, overlap 2083451 2083459 GCTATTTAAATAATA GAAGGTAGAGAATA ATTAA TATTCTCTACCTTC TTAATTTATATAAAC TERM 2850 2083488 - 2083456 - T 100 -16.6 -3.57185 | opp_overlap 2083456 2083451 2083459, overlap 2083454 GCTATTTAAATAATA GAAGGTAGAGAATA ATTAA TATTCTCTACCTTC TTAATTTATATAAAC TERM 2851 2083459 - 2083485 + T 100 -12.5 -3.95007 | opp_overlap 2083456 2083454, overlap 2083456 2083451 ATTTAAATAATAGAA GGTAGAGAATA ATTAA TATTCTCTACC TTCTTAATTTATATA scpB 2084151 - 2083564 - | segregation and condensation protein B scpA 2084890 - 2084144 - | segregation and condensation protein A TERM 2852 2085097 - 2085067 - R 100 -10.7 -5.04597 | gap 1, opp_overlap 2085067 2085070 ATTTATATATAAAAA CAACTAGCATA-AG GAGA CTATATGCTAGTTG TTCTTCTTTCAACTT TERM 2853 2085067 - 2085097 + r 100 -12 -4.1023 | opp_overlap 2085067, overlap 2085070 ATTTATATATAAAAA CAACTAGCATAAGG AGA CTATATGCTAGTTG TTCTTCTTTCAACTT TERM 2854 2085070 - 2085094 + r 77 -7.9 -4.16033 | opp_overlap 2085067, overlap 2085067 TATATATAAAAACAA CTAGCATAAGG AGA CTATATGCTAG TTGTTCTTCTTTCAA dacF 2086369 - 2085161 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 2855 2086465 - 2086434 - R 100 -10.4 -5.77571 | opp_overlap 2086434 AGCAAAAAAGAAAAA GTTATCCTATAC TTTAATTT GTATAGGATAAC TTTAACGAGAAAATC TERM 2856 2086434 - 2086465 + r 91 -10.4 -3.53224 | opp_overlap 2086434 AGCAAAAAAGAAAAA GTTATCCTATAC TTTAATTT GTATAGGATAAC TTTAACGAGAAAATC deoA 2087922 - 2086621 - | pyrimidine-nucleoside phosphorylase TERM 2857 2088014 - 2088027 + r 70 -2.5 -5.52909 | CAAGTACTTTCACCC TATAA AATA TTATA TTTTTTTCAATATTA TERM 2858 2088126 - 2088168 + r 79 -8.9 -3.52787 | gap 1, opp_overlap 2088126 2088134 2088139, overlap 2088134 TTTAAAGCTAAAAAT TATA-AAAAGAAAAGACTTT TATG AAAGCCTTTTCTTTTATATA TTATGCTCTTGGATG TERM 2859 2088168 - 2088126 - R 95 -11.1 -3.48026 | gap 1, opp_overlap 2088126 2088134, overlap 2088134 2088139 TTTAAAGCTAAAAAT TATA-AAAAGAAAAGACTTT TATG AAAGCCTTTTCTTTTATATA TTATGCTCTTGGATG TERM 2860 2088159 - 2088134 - R 100 -9.9 -5.1286 | opp_overlap 2088126 2088134, overlap 2088126 2088139 TAAAAATTATAAAAA GAAAAGACTTT TATG AAAGCCTTTTC TTTTATATATTATGC TERM 2861 2088134 - 2088159 + r 83 -7.7 -4.71223 | opp_overlap 2088134 2088126 2088139, overlap 2088126 TAAAAATTATAAAAA GAAAAGACTTT TATG AAAGCCTTTTC TTTTATATATTATGC TERM 2862 2088154 - 2088139 - R 72 -4 -5.3658 | opp_overlap 2088134 2088126, overlap 2088134 2088126 ATTATAAAAAGAAAA GACTTT TATG AAAGCC TTTTCTTTTATATAT CPE1808 2089041 - 2088169 - | tyrosine recombinase XerD TERM 2863 2088603 - 2088575 - G 86 -9.9 -3.81461 | opp_overlap 2088579 AAAGATGAATCTAAA TTAATATCTTCAA TTC TTAAAGATATTAA CTCTGAAACTTTCAT spoIIM 2089711 - 2089091 - | stage II sporulation protein M TERM 2864 2089968 - 2089939 - R 74 -5.9 -4.5787 | opp_overlap 2089939 TTATTAAAAAAAATA GAACTAAAGTA AACTCAAA TACTCTAGTTC CTATTTCTCATTATT CPE1810 2090509 - 2089979 - | hypothetical protein CPE1811 2090876 - 2090571 - | hypothetical protein TERM 2865 2090940 - 2090901 - R 100 -12.4 -5.24129 | opp_overlap 2090901 CCTCTCTATAAAAAA GCACTTTTTATCAGTGAA AATA TTATCTGATAAAAAGTGC TTTCTCCTTAATTTA TERM 2866 2090901 - 2090940 + r 100 -12.4 -4.11938 | opp_overlap 2090901 CCTCTCTATAAAAAA GCACTTTTTATCAGTGAA AATA TTATCTGATAAAAAGTGC TTTCTCCTTAATTTA spo0A 2091306 - 2090953 - | phosphorylation-activated transcription factor CPE1813 2091783 - 2091331 - | phosphorylation-activated transcription factor TERM 2867 2091618 - 2091633 + g 75 -4 -5.24796 | opp_overlap 2091606 TAATTATATCTAATA CAACTA AATC TGGTTG TTTTTCTTCTATAAG TERM 2868 2091918 - 2091882 - R 100 -10.6 -5.75342 | opp_overlap 2091882 2091886, overlap 2091861 2091859 2091858 TCCTTCTAAAAAAAA TAAATACTAAAAAATT CATTT AATTTTCTAGTATTTA TTATAACACATATTT TERM 2869 2091882 - 2091918 + r 74 -8.4 -3.31515 | opp_overlap 2091861 2091859 2091858 2091882, overlap 2091886 TCCTTCTAAAAAAAA TAAATACTAAAAAATT CATTT AATTTTCTAGTATTTA TTATAACACATATTT CPE1814 2093117 - 2091957 - | stage IV sporulation protein B TERM 2870 2092166 - 2092178 + g 79 -7.7 -4.24404 | TTGTACTAATGCTAT CTTGC TTT GCAAG TTTTACAATTTCAAT TERM 2871 2093281 - 2093241 - R 100 -11.5 -4.12456 | opp_overlap 2093246 2093251, overlap 2093251 ATATTAGTTTTAAAA TAAAAAAAAATAGAACTGT TTA ACAGTTCTATTTTGTATTA AAAATCACTTTATTA TERM 2872 2093246 - 2093276 + r 87 -11.4 -3.0464 | opp_overlap 2093241 2093251, overlap 2093251 AGTTTTAAAATAAAA AAAAATAGAACTGT TTA ACAGTTCTATTTTG TATTAAAAATCACTT TERM 2873 2093251 - 2093271 + r 100 -11.3 -4.66938 | opp_overlap 2093241 2093251, overlap 2093246 TAAAATAAAAAAAAA TAGAACTGT TTA ACAGTTCTA TTTTGTATTAAAAAT TERM 2874 2093271 - 2093251 - R 100 -11.3 -6.55664 | opp_overlap 2093251 2093246, overlap 2093241 TAAAATAAAAAAAAA TAGAACTGT TTA ACAGTTCTA TTTTGTATTAAAAAT recN 2094991 - 2093294 - | DNA repair protein RecN TERM 2875 2093444 - 2093454 + g 70 -4 -4.90002 | AGTTATAGGTTCAAC CTTT GAA AAAG TTTTATTATCTATTA argR 2095459 - 2095007 - | arginine repressor TERM 2876 2095300 - 2095315 + g 76 -6.2 -4.55016 | AGTGTCCTTTATTAT CTTGTT TTTT AACAAG TTTTAAATTTTTTAT CPE1817 2096312 - 2095482 - | NAD(+)/NADH kinase hlyD 2097212 - 2096397 - | hemolysin A CPE1819 2099083 - 2097224 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 2877 2097444 - 2097469 + g 73 -8.5 -3.45405 | opp_overlap 2097438 2097450, overlap 2097438 2097442 2097450 TTAAATCCATCCTTT GATAAGGAATT TAAT AATTCTTTATC TATTGGTTTTATAAA TERM 2878 2098195 - 2098185 - G 78 -6.8 -4.54727 | opp_overlap 2098184 TCCCCTAAATCAAAA GGAG ATA CTCC ATGATATTTATTAGG TERM 2879 2099115 - 2099148 + r 72 -9.1 -2.53953 | opp_overlap 2099124, overlap 2099114 ATTATTAAAATTTTC TCTCTAAAAGTTTCA TGGT TAAAACTTTTAGAGG CTCTGTATTTCCTTT CPE1820 2100009 - 2099104 - | geranyltranstransferase xseB 2100193 - 2099966 - | exodeoxyribonuclease VII small subunit xseA 2101414 - 2100212 - | exodeoxyribonuclease VII large subunit TERM 2880 2101248 - 2101215 - G 100 -11.3 -3.93061 | opp_overlap 2101214 2101213, overlap 2101209 AGTCTAAAATCTAAA TTAACTGCATTATTT TTAA ACATAATGCAGTTAA CCTTGCTATTTTCAT folD 2102249 - 2101416 - | folD bifunctional protein nusB 2102705 - 2102298 - | transcription antitermination protein NusB TERM 2881 2102819 - 2102798 - R 100 -14.5 -4.08221 | opp_overlap 2102796 2102794 2102794 TTTAACACAATGAAA CACCCTCTG AAAT CAGAGGGTG ACTACTATTTTTTTA CPE1825 2103213 - 2102824 - | alkaline shock protein spoIIIAH 2103795 - 2103298 - | stage III sporulation protein AH spoIIIAG 2104405 - 2103821 - | stage III sporulation protein AG CPE1828 2104833 - 2104441 - | stage III sporulation protein AF spoIIIAE 2106179 - 2105007 - | stage III sporulation protein AE spoIIIAD 2106576 - 2106190 - | stage III sporulation protein AD spoIIIAC 2106861 - 2106664 - | stage III sporulation protein AC spoIIIAB 2107452 - 2106937 - | stage III sporulation protein SpoAB spoIIIAA 2108483 - 2107599 - | stage III sporulation protein AA TERM 2882 2108408 - 2108425 + g 77 -5.7 -4.89567 | TAACTCTAATCTCTT GTAATTT ATTT AAATTAC TTTTATCTTTTAAAC TERM 2883 2108681 - 2108652 - R 100 -13.1 -5.75342 | opp_overlap 2108656 TTTGGGCAAAAAAAA TAAACTGTACCTT TTAT AAGGCACAGTTTA TTAAACTTCAAATTC TERM 2884 2108656 - 2108677 + r 75 -7.3 -4.20918 | opp_overlap 2108652 GGCAAAAAAAATAAA CTGTACCTT TTAT AAGGCACAG TTTATTAAACTTCAA CPE1834 2109044 - 2108682 - | hypothetical protein TERM 2885 2109064 - 2109100 + r 87 -7 -5.09685 | gap 2, opp_overlap 2109068, overlap 2109066 2109067 2109068 2109070 ATCACTTCCTTATAT TAAAT--ATGCTAAGCTT TTT AAGCTTAGCATAAATTTA TTTTTATCTATATTC TERM 2886 2109066 - 2109096 + r 91 -8.4 -5.02777 | opp_overlap 2109068, overlap 2109064 2109067 2109068 2109070 CACTTCCTTATATTA AATATGCTAAGCTT TTT AAGCTTAGCATAAA TTTATTTTTATCTAT TERM 2887 2109067 - 2109095 + r 95 -11.9 -3.59226 | opp_overlap 2109068, overlap 2109066 2109064 2109068 2109070 ACTTCCTTATATTAA ATATGCTAAGCTT TTT AAGCTTAGCATAA ATTTATTTTTATCTA TERM 2888 2109094 - 2109068 - R 100 -15.4 -3.83026 | opp_overlap 2109067 2109066 2109064 2109068 2109070 CTTCCTTATATTAAA TATGCTAAGCTT TTT AAGCTTAGCATA AATTTATTTTTATCT TERM 2889 2109068 - 2109094 + r 100 -15.4 -2.73909 | opp_overlap 2109068, overlap 2109067 2109066 2109064 2109070 CTTCCTTATATTAAA TATGCTAAGCTT TTT AAGCTTAGCATA AATTTATTTTTATCT TERM 2890 2109070 - 2109092 + r 93 -13.6 -2.8882 | opp_overlap 2109068, overlap 2109068 2109067 2109066 2109064 TCCTTATATTAAATA TGCTAAGCTT TTT AAGCTTAGCA TAAATTTATTTTTAT efp 2109715 - 2109158 - | elongation factor P CPE1836 2110233 - 2109886 - | hypothetical protein CPE1837 2110670 - 2110230 - | hypothetical protein TERM 2891 2110475 - 2110491 + gr 83 -2.4 -5.92399 | CCATATTAACTCCCT TTATTT CACTT AAATAA TTTTTTATTTTATTA CPE1838 2111280 - 2110630 - | hypothetical protein CPE1839 2111626 - 2111216 - | hypothetical protein CPE1840 2111903 - 2111613 - | hypothetical protein CPE1841 2112550 - 2112038 - | hypothetical protein CPE1842 2112998 - 2112570 - | hypothetical protein pilC 2114010 - 2112991 - | fimbrial assembly protein tapB 2115385 - 2113997 - | type IV pilus assembly protein TERM 2892 2115443 - 2115478 + r 95 -10.8 -4.36485 | opp_overlap 2115444, overlap 2115444 TTTTAAACAAAAAAA ATTCTAGATTATTAAA AATT TTTAATAATCTAGAAC TTTTAACTATTTTAT TERM 2893 2115444 - 2115477 + r 100 -14.3 -3.20264 | opp_overlap 2115444, overlap 2115443 TTTAAACAAAAAAAA TTCTAGATTATTAAA AATT TTTAATAATCTAGAA CTTTTAACTATTTTA TERM 2894 2115477 - 2115444 - R 100 -14.3 -6.23545 | opp_overlap 2115444 2115443 TTTAAACAAAAAAAA TTCTAGATTATTAAA AATT TTTAATAATCTAGAA CTTTTAACTATTTTA CPE1845 2116516 - 2115485 - | hypothetical protein dapF 2117351 - 2116533 - | diaminopimelate epimerase TERM 2895 2118629 - 2118616 - g 80 -2.3 -5.77856 | AATAAATTAAAAAAA GCTGA AGAA TCTGC CTTAGAACAACTAGC CPE1847 2117443 - 2119170 + | fibronectin-binding protein CPE1848 2120407 - 2119280 - | hypothetical protein CPE1849 2120963 - 2120427 - | pyrimidine regulatory protein PyrR CPE1850 2121887 - 2120967 - | hypothetical protein TERM 2896 2121988 - 2122009 + r 80 -5.9 -5.17353 | opp_overlap 2121988 AAACAAAAAGAAAAA TCTCACCTT AATC AAAGTGAGA TTTTTTAATAGCTCT TERM 2897 2122009 - 2121988 - R 100 -8.1 -5.77734 | opp_overlap 2121988 AAACAAAAAGAAAAA TCTCACCTT AATC AAAGTGAGA TTTTTTAATAGCTCT divIVA 2122651 - 2122025 - | cell-division initiation protein CPE1852 2123425 - 2122664 - | S4 domain protein CPE1853 2123882 - 2123427 - | hypothetical protein CPE1854 2124554 - 2123895 - | hypothetical protein CPE1855 2125385 - 2124654 - | hypothetical protein sbp 2125736 - 2125398 - | small basic protein CPE1857 2126465 - 2125749 - | hypothetical protein TERM 2898 2125930 - 2125944 + g 73 -8.6 -3.09165 | overlap 2125929 2125942 ACCTTTATTGTTAGC TTCTCC TTT GGAGAA ATTCTTTCATTATTT CPE1858 2127225 - 2126479 - | cell division protein FtsQ TERM 2899 2127385 - 2127363 - R 100 -10.7 -5.5074 | opp_overlap 2127367 CAATTTAATAAAAAA TAAAGGCGT ATAAA ACGCCTTTA ATCAATCTTTTTATT TERM 2900 2127367 - 2127381 + r 70 -7.1 -3.81154 | opp_overlap 2127363 TTAATAAAAAATAAA GGCGT ATAAA ACGCC TTTAATCAATCTTTT spoVE 2128507 - 2127383 - | stage V sporulation protein E TERM 2901 2127595 - 2127609 + g 75 -4.3 -5.17744 | TTCCATATTCATCTT TAGCA CTCAT TGCTA TTTTTATTCCTCTAT TERM 2902 2127930 - 2127913 - G 72 -8.5 -3.32684 | overlap 2127911 2127910 CTGCAAATAAAATTA TTGGAGT TATT ACTCCAA ACATAAATCTTTTTC mraY 2129488 - 2128535 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 2130917 - 2129556 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 2903 2129958 - 2129976 + g 75 -4.6 -5.16237 | overlap 2129960 TATAAGCTCTAATCT CATTGAAG TAG CTTCAATA TTTTTTAATCCCCTT TERM 2904 2129960 - 2129974 + g 77 -7.2 -4.20707 | overlap 2129958 TAAGCTCTAATCTCA TTGAAG TAG CTTCAA TATTTTTTAATCCCC murE 2132384 - 2130930 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 2905 2132467 - 2132436 - R 100 -11 -4.51196 | opp_overlap 2132438 2132460 2132463, overlap 2132438 GTTAAATTCACAAAA TACTAGCATGTGAA ATTA CTCACATGCTAGTT TTTAACTATCATTAT TERM 2906 2132438 - 2132465 + r 100 -12.9 -4.72333 | opp_overlap 2132438 2132436, overlap 2132460 2132463 TAAATTCACAAAATA CTAGCATGTGA AATTAC TCACATGCTAG TTTTTAACTATCATT TERM 2907 2132465 - 2132438 - R 100 -13.6 -3.85911 | opp_overlap 2132438 2132460 2132463, overlap 2132436 TAAATTCACAAAATA CTAGCATGTGAA ATTA CTCACATGCTAG TTTTTAACTATCATT spoVD 2134698 - 2132479 - | stage V sporulation protein D TERM 2908 2133822 - 2133839 + g 75 -7.1 -4.09459 | GATTATAATCTGGTT TATTAGC CATA GCTAATA TTTCTCCATTTTTAG TERM 2909 2134876 - 2134835 - R 74 -4.8 -5.24531 | gap 1, opp_overlap 2134835 2134839, overlap 2134839 AGCCCTTATAAAAAA TTATGGATGTACTCTTA AAATAATAA TAAAAGTACATCC-TAA TTTATTCCCCTATTG CPE1864 2135314 - 2134886 - | hypothetical protein mraW 2136318 - 2135386 - | S-adenosyl-methyltransferase MraW TERM 2910 2136783 - 2136812 + r 100 -12.3 -5.71712 | opp_overlap 2136783 CGCCATAAAGAAAAA GAGCTATCTGAAG AAAA CTTCAAATAGCTC TTTTTTTGTCTAAAA TERM 2911 2136812 - 2136783 - R 100 -14.5 -5.38054 | opp_overlap 2136783 CGCCATAAAGAAAAA GAGCTATCTGAAG AAAA CTTCAAATAGCTC TTTTTTTGTCTAAAA CPE1866 2137963 - 2136866 - | translation-associated GTPase TERM 2912 2138140 - 2138164 + G 74 -8.1 -3.70636 | opp_overlap 2138130, overlap 2138130 ATTAAGAAAGTTTTT TCATTATTATT TTC AATAATGATGA TTCTATCTATTACTT TERM 2913 2138272 - 2138257 - g 77 -7.6 -4.1552 | overlap 2138263 TATTCTTTTAATAAA GAGGAA GGTG TTCCTC ATGGGCCAAAAGAAA CPE1867 2138122 - 2138919 + | polysaccharide deacetylase TERM 2914 2139069 - 2139079 + T 70 -2.6 -5.59534 | TAGACCCCTTATTAT TTAT CTA ATAA TTTTTTATTCTACTT CPE1868 2139734 - 2139099 - | methenyltetrahydrofolate cyclohydrolase CPE1869 2141049 - 2139763 - | hypothetical protein TERM 2915 2140372 - 2140386 + g 70 -5.8 -4.27465 | overlap 2140351 2140350 GTATCCCCTGGTTAC GATAAA CAT TTTATC TTCTTTTACGTTATA tagA 2141765 - 2141049 - | teichoic acid biosynthesis protein A CPE1871 2142428 - 2141781 - | TPR domain protein CPE1872 2142881 - 2142447 - | hypothetical protein TERM 2916 2143157 - 2143107 - R 81 -5.3 -5.36364 | gap 2, opp_overlap 2143107 2143115 2143116 2143119 CTAAAAATATAAAAA GAGCTATATT--TATAACTTATA AGTTTTA TATAAGTTATATTAACATAGCTC TTTGTTTAACTTAAA manB 2144900 - 2143173 - | phosphomannomutase TERM 2917 2143829 - 2143843 + g 74 -5 -4.87665 | TTTTTCTTACTGACT CTGTAG TAA CTATAG TTTTTATAACTGCAC ctc 2145667 - 2145056 - | general stress protein TERM 2918 2145780 - 2145737 - R 100 -12 -4.03978 | opp_overlap 2145736 2145735 2145741, overlap 2145741 AATGTCTTATATAAA TAAAGAGGACTTTCTCAAAA TAAA TTTTGATAAAGGCCCCTTTA AATTAATTTTATTTC TERM 2919 2145776 - 2145741 - R 85 -8.4 -4.62441 | opp_overlap 2145736 2145735 2145741, overlap 2145737 TCTTATATAAATAAA GAGGACTTTCTCAAAA TAAA TTTTGATAAAGGCCCC TTTAAATTAATTTTA CPE1875 2150240 - 2145801 - | hypothetical protein TERM 2920 2146111 - 2146127 + g 71 -7.3 -3.8397 | GTAGCTGTTATTTCT GGGACAA TAT TTGTTCC TTCTTCTAAATCTAT CPE1876 2152670 - 2150418 - | hypothetical protein TERM 2921 2152741 - 2152753 + r 80 -3.5 -5.81622 | opp_overlap 2152719 2152717 2152741 TATTACAATAAATAT TAAAT ATT ATTTA TTTTTTTGATTTTAT TERM 2922 2152808 - 2152853 + r 100 -12.4 -4.09455 | opp_overlap 2152800 2152808 2152812, overlap 2152812 AGTAATATTATAAAA TAAACCTTATAAATTATTGG TGAAAT TTAATAATTTATAAGGTTTA TTATTTAGTATTAAT TERM 2923 2152853 - 2152808 - R 100 -11 -4.55625 | opp_overlap 2152808 2152812, overlap 2152800 2152812 AGTAATATTATAAAA TAAACCTTATAAATTATT GGTGAAATTT AATAATTTATAAGGTTTA TTATTTAGTATTAAT TERM 2924 2152849 - 2152812 - R 81 -7.4 -4.81357 | opp_overlap 2152808 2152812, overlap 2152808 ATATTATAAAATAAA CCTTATAAATTATT GGTGAAATTT AATAATTTATAAGG TTTATTATTTAGTAT TERM 2925 2152812 - 2152849 + r 89 -8.8 -4.61162 | opp_overlap 2152812 2152808, overlap 2152808 ATATTATAAAATAAA CCTTATAAATTATTGG TGAAAT TTAATAATTTATAAGG TTTATTATTTAGTAT glpQ 2153610 - 2152894 - | glycerophosphodiester phosphodiesterase CPE1878 2154636 - 2153614 - | glycolate oxidase CPE1879 2155093 - 2154650 - | hypothetical protein spoVD 2157514 - 2155331 - | stage V sporulation protein D mutS2 2160137 - 2157777 - | recombination and DNA strand exchange inhibitor protein TERM 2926 2159102 - 2159122 + g 72 -6.9 -4.08394 | TAAGTTCAATAAGCC CTGTAGTCT TTA AGGTTACAG TTTTACCACCAGTAT TERM 2927 2159210 - 2159240 + g 95 -12 -3.22756 | opp_overlap 2159213, overlap 2159207 CAACTTTATCTTTAG GAATTAGTGGATGC CTA GCATCCATTAAATC TATTACTCCTTCTTC TERM 2928 2159237 - 2159213 - G 78 -10.1 -3.15544 | opp_overlap 2159210 2159207 CTTTATCTTTAGGAA TTAGTGGATGC CTA GCATCCATTAA ATCTATTACTCCTTC TERM 2929 2159690 - 2159704 + g 82 -8.6 -3.94853 | TATAAAGTTTATCAC TTGCAG AAT CTGCAA TTTCATCTTCACTTA CPE1882 2162511 - 2160151 - | peptidase, U32 family TERM 2930 2161371 - 2161395 + g 86 -7.3 -5.02476 | TAGTATCTGAAGTTT TATAAAGCTTA TCA TTAGCTTTATA TTTTTTAGGGAATAT TERM 2931 2161557 - 2161586 + g 77 -7.9 -4.08216 | CATTTTTTAGAACTT CTCCAAGTAAAAC TCCT GTATTTCTTGGAG TTTTAAAGGCCATCA CPE1883 2162901 - 2163689 + | hypothetical protein TERM 2932 2163762 - 2163722 - T 100 -8.7 -5.05228 | gap 1, opp_overlap 2163724 ATTAAACCATAAAAA GACTGTAAGAAAATTTAT TTTCAC ATAAATC-TCTTACAGTC TCTAAATACACTTTT CPE1884 2165131 - 2163776 - | hypothetical protein TERM 2933 2165201 - 2165168 - R 100 -9.2 -5.55769 | opp_overlap 2165168 TTCCATAATAAAAAA TATGTTATGTACAT TTTAAC ATATACATAACATA TTTAAAACTATTATT pheT 2167593 - 2165212 - | phenylalanyl-tRNA synthetase subunit beta pheS 2168642 - 2167617 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2934 2168824 - 2168789 - R 83 -6.8 -5.13722 | opp_overlap 2168791 2168793, overlap 2168793 TCTATTAAAATAAAA TAAACCCCATCCCTCA AAAA CAAGGGACGGGGTATT CATATCCGTGGTACC TERM 2935 2168820 - 2168793 - R 100 -12 -5.04377 | opp_overlap 2168791 2168793, overlap 2168789 TTAAAATAAAATAAA CCCCATCCCTCA AAAA CAAGGGACGGGG TATTCATATCCGTGG TERM 2936 2168793 - 2168820 + r 72 -8.4 -3.20573 | opp_overlap 2168793 2168789, overlap 2168791 TTAAAATAAAATAAA CCCCATCCCT CAAAAACA AGGGACGGGG TATTCATATCCGTGG CPE1887 2170379 - 2169225 - | transposase TERM 2937 2170028 - 2170042 + g 80 -2.1 -5.67967 | TCTTAGACTTAAATT TAGGT CTACC ACCTG TTTTTTTGTAATACT CPE1888 2170761 - 2170390 - | transposase CPE1889 2171855 - 2171082 - | RNA methyltransferase, TrmH family TERM 2938 2171248 - 2171274 + g 100 -9.6 -4.64763 | opp_overlap 2171247 2171246 2171260, overlap 2171247 2171260 ACAGCTATCATAACT TTTCCTTGAAGA TTT TCTTCAAAGAAA TTATTTTTTCCCTGA trkA 2172546 - 2171881 - | potassium uptake system protein trkB 2173909 - 2172569 - | potassium uptake protein, TrkH family TERM 2939 2174086 - 2174041 - R 100 -18.2 -3.66921 | opp_overlap 2174044, overlap 2174044 2174083 2174084 AATTGTAATTGCAAA TAAGTTTAATTTTATTCAGA TAAAAG TCTGAATAAAATTAAACTTA TAAAATATAAATAAA TERM 2940 2174044 - 2174083 + r 100 -16.2 -3.3514 | opp_overlap 2174041 2174044 TGTAATTGCAAATAA GTTTAATTTTATTCAGAT AAAA GTCTGAATAAAATTAAAC TTATAAAATATAAAT TERM 2941 2174083 - 2174044 - R 100 -15.5 -3.96618 | opp_overlap 2174044, overlap 2174041 TGTAATTGCAAATAA GTTTAATTTTATTCAGA TAAAAG TCTGAATAAAATTAAAC TTATAAAATATAAAT TERM 2942 2174130 - 2174114 - R 100 -8 -6.18768 | opp_overlap 2174114 AAAATATAAAAAAAA TGCGAG ATAAA CTCGCA TCTGATATTAAGCGT rplT 2174497 - 2174138 - | 50S ribosomal protein L20 rpmI 2174724 - 2174527 - | 50S ribosomal protein L35 infC 2175150 - 2174746 - | translation initiation factor IF-3 TERM 2943 2174786 - 2174802 + g 74 -5.1 -4.91109 | overlap 2174756 ATTATCATGTTTCTA CCTTCTA ATT TAGCAGG TTTTTCTACTGAACA TERM 2944 2175327 - 2175309 - R 100 -8.8 -5.76237 | opp_overlap 2175309 TATATAAATAAAAAA GGACGGTT TTA AGCCGTCC TCTATTACCAAAATC TERM 2945 2175309 - 2175327 + r 87 -11 -3.07013 | opp_overlap 2175309 TATATAAATAAAAAA GGACGGTT TTA AGCCGTCC TCTATTACCAAAATC CPE1895 2176427 - 2175549 - | putative sporulation protein YtxC CPE1896 2176562 - 2177257 + | hypothetical protein CPE1897 2177512 - 2178492 + | BadF/BadG/BcrA/BcrD ATPase family protein CPE1898 2179179 - 2178625 - | hypothetical protein TERM 2946 2179316 - 2179285 - R 91 -8.2 -5.03994 | TTTTACACATAAAAA GGATAAATATAAAG TTTC CTTTACACCTATCC TAAAAATCTAATTAA CPE1899 2179899 - 2179345 - | hypothetical protein TERM 2947 2179561 - 2179579 + g 100 -7.6 -5.68039 | opp_overlap 2179565 CATCTCATTATTTTT TAAAGAAA CAC TTTCTTTA TTTTTTTCTACATTT CPE1900 2180198 - 2180575 + | hypothetical protein TERM 2948 2180652 - 2180675 + T 100 -11.2 -5.24129 | opp_overlap 2180652 AAGAGCATAAAAAAA CATCTATAAG AAAT CTTATAGATG TTTTTTATGGAGGCG TERM 2949 2180675 - 2180652 - T 100 -11.2 -5.70829 | opp_overlap 2180652 AAGAGCATAAAAAAA CATCTATAAG AAAT CTTATAGATG TTTTTTATGGAGGCG TERM 2950 2180795 - 2180811 + T 75 -8.7 -3.25192 | overlap 2180792 ATCGAACCCGGGTAT CCAGCTT GGA AGGCTGG TGTTCTACCATTGAA TERM 2951 2181019 - 2180999 - T 76 -8.4 -3.66999 | opp_overlap 2180999 AGCTATCGAGCCAAA TGTCTTGA GCTCT TCAAGACA TTTATTATTATATTA TERM 2952 2180999 - 2181019 + T 89 -9.1 -4.57503 | opp_overlap 2180999 AGCTATCGAGCCAAA TGTCTTGAG CTC TTCAAGACA TTTATTATTATATTA hslO 2182015 - 2181056 - | Hsp33-like chaperonin CPE1902 2182768 - 2182031 - | hypothetical protein CPE1903 2183092 - 2182820 - | small acid-soluble spore protein beta TERM 2953 2183173 - 2183152 - H 70 -7.5 -3.4268 | opp_overlap 2183150, overlap 2183150 CTATAAGCTTAAATA TTCATATTT AGTC AAATATGAA AGTTAACTTACTCAA TERM 2954 2183435 - 2183421 - g 75 -5.8 -4.78107 | GATCAGCAGGAAAAA CTTTAA AAT TTAAAG GTGAAGATGTATTAG asd 2183294 - 2184271 + | aspartate-semialdehyde dehydrogenase dapA 2184296 - 2185171 + | dihydrodipicolinate synthase TERM 2955 2185215 - 2185184 - f 79 -8.8 -3.56161 | opp_overlap 2185184 2185187, overlap 2185187 TAATCTATTATATAA TAAGCATAATCGCC TTTA GGTGGTTATGCTTA TTTAAAACTAATATC TERM 2956 2185184 - 2185215 + F 100 -13.2 -3.5882 | opp_overlap 2185184 2185187, overlap 2185187 TAATCTATTATATAA TAAGCATAATCGCC TTTA GGTGGTTATGCTTA TTTAAAACTAATATC TERM 2957 2185187 - 2185212 + F 95 -10.5 -3.9281 | opp_overlap 2185184 2185187, overlap 2185184 TCTATTATATAATAA GCATAATCGCC TTTA GGTGGTTATGC TTATTTAAAACTAAT dapB 2185244 - 2186008 + | dihydrodipicolinate reductase patA 2187446 - 2186304 - | asparate aminotransferase CPE1908 2187982 - 2187446 - | cob(I)alamin adenosyltransferase dapD 2188176 - 2188886 + | tetrahydrodipicolinate succinylase TERM 2958 2188921 - 2188894 - T 73 -2.7 -5.77677 | gap 1, opp_overlap 2188895 2188896, overlap 2188896 GAAAATAATAAAAAA TAGCCATGAGGA TTTAT TCC-CATGGCCT TTTTATTAAAACTTT TERM 2959 2188896 - 2188919 + T 72 -7.5 -3.63768 | gap 1, opp_overlap 2188894 2188896, overlap 2188895 AAATAATAAAAAATA GCCATGAGGA TTTAT TCC-CATGGC CTTTTTATTAAAACT TERM 2960 2188919 - 2188896 - T 81 -7.5 -4.47161 | gap 1, opp_overlap 2188896 2188895, overlap 2188894 AAATAATAAAAAATA GCCATGAGGA TTTAT TCC-CATGGC CTTTTTATTAAAACT CPE1910 2189592 - 2188936 - | single-strand DNA-binding protein CPE1911 2190484 - 2189708 - | polysaccharide deacetylase family protein CPE1912 2190592 - 2191122 + | hypothetical protein CPE1913 2191188 - 2192294 + | hypothetical protein TERM 2961 2192297 - 2192326 + F 100 -11.7 -5.90231 | opp_overlap 2192297 2192295 2192301 CTTTAGTGAATAATA TAAAGGGGATATT TTAT AATATCCTCTTTA TTTTTTTATATTTAT TERM 2962 2192326 - 2192297 - f 82 -9.5 -3.41988 | opp_overlap 2192297, overlap 2192295 2192301 CTTTAGTGAATAATA TAAAGGGGATATT TTAT AATATCCTCTTTA TTTTTTTATATTTAT TERM 2963 2192322 - 2192301 - f 70 -5.9 -4.34866 | opp_overlap 2192297, overlap 2192297 2192295 AGTGAATAATATAAA GGGGATATT TTAT AATATCCTC TTTATTTTTTTATAT TERM 2964 2192776 - 2192765 - g 71 -3 -5.19251 | opp_overlap 2192765, overlap 2192755 TAATATCAATAAAAA GTTA AAAG TAAC TTCTTTAATGAGAGA CPE1914 2192466 - 2193887 + | PBP 5 synthesis repressor TERM 2965 2193889 - 2193934 + T 75 -6.6 -4.52415 | gap 2, opp_overlap 2193892 2193894, overlap 2193892 2193894 CTGAAGGAAATTAAT AAAGA-GCTATATAGAA-CTAA TAAA TTAGATTCTATATAGCTTCTTC TTTGTTATTATAAAT TERM 2966 2193930 - 2193892 - T 82 -8.5 -4.42206 | gap 1, opp_overlap 2193889 2193892 2193894, overlap 2193894 AAGGAAATTAATAAA GAGCTATATAGAA-CTAA TAAA TTAGATTCTATATAGCTT CTTCTTTGTTATTAT TERM 2967 2193892 - 2193931 + T 80 -8.3 -4.35992 | gap 2, opp_overlap 2193892 2193894, overlap 2193889 2193894 AAGGAAATTAATAAA GA-GCTATATAGAA-CTAA TAAA TTAGATTCTATATAGCTTC TTCTTTGTTATTATA TERM 2968 2193928 - 2193894 - T 95 -11.1 -3.797 | gap 1, opp_overlap 2193892 2193889 2193894, overlap 2193892 GGAAATTAATAAAGA GCTATATAGAA-CTAA TAAA TTAGATTCTATATAGC TTCTTCTTTGTTATT TERM 2969 2193894 - 2193928 + T 100 -11.1 -4.25538 | gap 1, opp_overlap 2193894 2193892, overlap 2193892 2193889 GGAAATTAATAAAGA GCTATATAGAA-CTAA TAAA TTAGATTCTATATAGC TTCTTCTTTGTTATT hlyE 2194583 - 2193942 - | hemolysin III TERM 2970 2195022 - 2195012 - g 83 -6.8 -5.14985 | overlap 2195013 TTAAACATAGAAAAA GGAG AAA CTCC TCAAGTTTTAGTTCC CPE1916 2194709 - 2195203 + | hypothetical protein TERM 2971 2195226 - 2195209 - T 73 -2.1 -5.75478 | overlap 2195201 2195210 AACTAGATAAAAAAA CTTTTAT AAAA ATAAAAA ACTTACAAATTTACT TERM 2972 2195279 - 2195228 - T 76 -2.6 -5.98675 | gap 1, opp_overlap 2195228, overlap 2195240 TATAAAAATAAAAAA CTTACAAAT-TTACTTAAAGAGTTA CCC TATTTCTTTAAGAATTATTTGTAAG TTTTTTTATTAGCTT TERM 2973 2195228 - 2195279 + T 88 -4.8 -5.83226 | gap 1, opp_overlap 2195228 2195240 TATAAAAATAAAAAA CTTACAAAT-TTACTTAAAGAGTTA CCC TATTTCTTTAAGAATTATTTGTAAG TTTTTTTATTAGCTT CPE1917 2196877 - 2195318 - | hypothetical protein folC 2198310 - 2196988 - | FolC bifunctional protein TERM 2974 2197486 - 2197502 + g 71 -4.5 -4.72986 | overlap 2197487 GTTTACTCCATTATT TCTTAAT TTA ATTAAGG TTTTTAATGCCACTA TERM 2975 2198525 - 2198542 + r 81 -7.1 -4.87133 | TGCTTGGTTTTCGCT TCTAAGT ACGC ACTTAGA TTTTCTTTAAACACT TERM 2976 2198961 - 2198977 + r 72 -5.2 -4.99312 | ATAAGTTTTTTAGCA CTTTAG ATACA CTAAAG TTTTCTTGTTATATT valS 2201633 - 2198991 - | valyl-tRNA synthetase TERM 2977 2200477 - 2200493 + g 70 -5.1 -4.55295 | TTTTCAAATCTTTCT GGAACGA ATT TAGTTCC TTTGTTTCTAACAAC TERM 2978 2201031 - 2201042 + g 72 -4.4 -5.15167 | GTATTTAATATGCCA GAAG TTTC CTTC TTTTTCTTCATACTC TERM 2979 2201542 - 2201556 + g 70 -5 -4.65747 | opp_overlap 2201542, overlap 2201522 2201519 CTCTTATCTATTACA GGAGTA AAA TACTTC TTTTCTTGCCAATTG CPE1920 2202293 - 2202643 + | tetratricopeptide repeat protein CPE1921 2202862 - 2202701 - | hypothetical protein CPE1922 2204024 - 2202849 - | transglutaminase domain protein TERM 2980 2202992 - 2202974 - G 79 -7.4 -4.41348 | opp_overlap 2202985 TTTCTGGTAAATAAA CCTCATTC CAA GAATGTGG TCCCCATTCCTTTCC TERM 2981 2203907 - 2203896 - G 82 -4.4 -5.59655 | TAAAGCAAGAAAAAA GGAT ATAT ATCC TCCTAATTCCTCTAT recX 2204668 - 2204030 - | recombination regulator RecX CPE1924 2205918 - 2204674 - | peptidase, M16 family CPE1925 2205887 - 2206684 + | DNA-binding response regulator TERM 2982 2206884 - 2206894 + G 78 -6.8 -4.66833 | opp_overlap 2206883 AGACTCTTTATATAG GGCT TTA AGCC TTTTTGAACTTGAAA TERM 2983 2207088 - 2207058 - g 84 -9.2 -3.79623 | opp_overlap 2207064, overlap 2207064 AAAAACCTTATTAAA TTCAAATTCTGGAG TAA CTACAGAATTTAAA AGCAGAAAATACTCA CPE1926 2206684 - 2208207 + | sensor histidine kinase TERM 2984 2208346 - 2208328 - T 73 -9 -2.89808 | opp_overlap 2208322 2208328, overlap 2208327 AAAATTAAGTGAAAG TCCAAATT TTC AATTTGGA TTCTTGAACTTATGC TERM 2985 2208328 - 2208346 + T 79 -9 -3.6968 | opp_overlap 2208328 2208327, overlap 2208322 AAAATTAAGTGAAAG TCCAAATT TTC AATTTGGA TTCTTGAACTTATGC fabG 2209268 - 2208522 - | 3-ketoacyl-(acyl-carrier-protein) reductase CPE1928 2210347 - 2209361 - | dipeptidase family protein TERM 2986 2210448 - 2210488 + r 76 -8.5 -3.69884 | opp_overlap 2210448, overlap 2210453 ATTATTATTAAAAAA TTAAAGCCATGTTACAAAT TTA AATTGCAACATGACTTTAA TTCTCTATTCAGTAT TERM 2987 2210488 - 2210448 - R 100 -12.9 -5.19212 | opp_overlap 2210448 2210453 ATTATTATTAAAAAA TTAAAGCCATGTTACAAAT TTA AATTGCAACATGACTTTAA TTCTCTATTCAGTAT glyA 2211805 - 2210573 - | serine hydroxymethyltransferase TERM 2988 2211760 - 2211778 + g 74 -7.4 -3.91369 | opp_overlap 2211760, overlap 2211752 2211755 TTTCCTTTTGAACAA GATGTGCA ATT TGCTCATC TTCTCTTTCTAAGTT TERM 2989 2211856 - 2211878 + H 70 -5 -4.77047 | opp_overlap 2211856 2211869 TTATAAATTTATTAA TTATTTTTAG CAA CAAAAAATAA TTTGTTTATATTTTG CPE1930 2211985 - 2212755 + | hypothetical protein CPE1931 2212756 - 2213277 + | hypothetical protein TERM 2990 2213294 - 2213275 - T 100 -10.8 -5.71712 | opp_overlap 2213275 TTTCATACAAAAAAA TAGACCAC AAAG GTGGTCTA TTATTTTACAAAACT TERM 2991 2213275 - 2213294 + T 95 -10.8 -4.17316 | opp_overlap 2213275 TTTCATACAAAAAAA TAGACCAC AAAG GTGGTCTA TTATTTTACAAAACT CPE1932 2213567 - 2213295 - | hypothetical protein TERM 2992 2213813 - 2213787 - R 100 -11.7 -4.33767 | opp_overlap 2213781 2213787 ATAAATTGACTAAAA TTAGCGTGAGT AAAAA ACCCACGCTAA TTAAGTTTACTTTAG TERM 2993 2213787 - 2213813 + r 82 -9.5 -3.35586 | opp_overlap 2213787, overlap 2213781 ATAAATTGACTAAAA TTAGCGTGAGT AAAAA ACCCACGCTAA TTAAGTTTACTTTAG aspS 2215647 - 2213854 - | aspartyl-tRNA synthetase hisS 2216915 - 2215668 - | histidyl-tRNA synthetase hemZ 2218389 - 2216947 - | coproporphyrinogen III oxidase TERM 2994 2217270 - 2217280 + g 82 -4 -5.52384 | opp_overlap 2217270 TACTCATCTCATACA TCTT ATT AAGA TTTTTTTGCTCCGCA CPE1936 2218999 - 2218379 - | metallo-beta-lactamase family protein TERM 2995 2218634 - 2218645 + g 70 -4.4 -4.96388 | TGGTGTATGTCCTGG TGTC TCTA GACA TTTTATTTCATAATT TERM 2996 2219044 - 2219088 + r 70 -7.3 -3.81539 | opp_overlap 2219047 TTTATATTTTTAACC GAATTTATAGGAGTCTAACTT ATT AAGCTAAACTCCTATAAAAAC TTTCAATGTTTAACT TERM 2997 2219085 - 2219047 - R 100 -16.4 -3.17901 | opp_overlap 2219044 ATATTTTTAACCGAA TTTATAGGAGTCTAACTT ATT AAGCTAAACTCCTATAAA AACTTTCAATGTTTA CPE1937 2219608 - 2219159 - | D-tyrosyl-tRNA deacylase relA 2221803 - 2219623 - | GTP pyrophosphokinase TERM 2998 2221435 - 2221445 + g 76 -5.4 -5.14645 | overlap 2221423 TATGTCTTTAGCCAT TGCT AAA AGCA TTTTTCTTACATTGT TERM 2999 2221895 - 2221877 - R 73 -4.6 -5.1285 | opp_overlap 2221893, overlap 2221889 2221893 AAAAAATAAAATAAA CCAATAAT AAA ATTAATGG CTGGTCGATAAACCA TERM 3000 2221918 - 2221889 - R 75 -5.7 -4.96523 | opp_overlap 2221893, overlap 2221877 2221893 AAACCAATAATAAAA TTAATGGCTGGTC GATA AACCAGCCATTTT TAACTCTATTATAAT TERM 3001 2221893 - 2221914 + r 100 -10.2 -4.74453 | opp_overlap 2221877 2221889 2221893 CAATAATAAAATTAA TGGCTGGT CGATAA ACCAGCCA TTTTTAACTCTATTA TERM 3002 2221914 - 2221893 - R 100 -10.9 -3.87952 | opp_overlap 2221893, overlap 2221877 2221889 CAATAATAAAATTAA TGGCTGGTC GATA AACCAGCCA TTTTTAACTCTATTA apt 2222473 - 2221955 - | adenine phosphoribosyltransferase CPE1940 2223372 - 2222518 - | DHH domain protein TERM 3003 2222814 - 2222836 + g 72 -5 -4.70107 | opp_overlap 2222817, overlap 2222827 TTGAAACACTACCTA TAAGTATTAA ATC TAAATACTTA TTTATTCTTTTCATG TERM 3004 2223561 - 2223536 - R 100 -12.1 -6.55664 | opp_overlap 2223536 TAAAATAAAAAAAAA TGCTAAAAGTT ATAA AACTTTTAGCA TTTTTATACTATTAC TERM 3005 2223536 - 2223561 + r 100 -12.1 -4.98436 | opp_overlap 2223536 TAAAATAAAAAAAAA TGCTAAAAGTT ATAA AACTTTTAGCA TTTTTATACTATTAC secF 2224442 - 2223573 - | preprotein translocase subunit SecF TERM 3006 2224150 - 2224168 + g 72 -9 -2.93991 | TTTAAATCGTATTTT TCTTTAAG AGC CTTAAAGA TATCATTAACTTGAG secD 2225694 - 2224435 - | preprotein translocase subunit SecD TERM 3007 2225732 - 2225788 + r 70 -4.3 -5.07486 | gap 2, opp_overlap 2225734 2225743 2225745, overlap 2225737 2225740 2225744 2225745 TTCTCTGATAAACTA AATTATATTAAT-AT-GTTGCCATATA GTCAA TATATGGCAACAATTATTAATATTATA TTTTTATTCAGCGTC TERM 3008 2225786 - 2225734 - R 71 -6.9 -4.13995 | gap 2, opp_overlap 2225732 2225737 2225740 2225744 2225745, overlap 2225743 2225745 CTCTGATAAACTAAA TTATATTAAT-AT-GTTGCCATATA GTCAA TATATGGCAACAATTATTAATATTA TATTTTTATTCAGCG TERM 3009 2225737 - 2225783 + r 79 -8.6 -4.18737 | gap 2, opp_overlap 2225734 2225743 2225745, overlap 2225732 2225740 2225744 2225745 TGATAAACTAAATTA TATTAAT-AT-GTTGCCATATA GTCAA TATATGGCAACAATTATTAATA TTATATTTTTATTCA TERM 3010 2225740 - 2225777 + r 95 -11 -3.4914 | gap 1, opp_overlap 2225734 2225743 2225745, overlap 2225737 2225732 2225744 2225745 TAAACTAAATTATAT TAATATGTTGCCATATA GTCAA TATATGGCAACA-ATTA TTAATATTATATTTT TERM 3011 2225774 - 2225743 - R 74 -8.3 -3.35746 | gap 1, opp_overlap 2225740 2225737 2225732 2225744 2225745, overlap 2225734 2225745 ACTAAATTATATTAA TATGTTGCCATATA GTCAA TATATGGCAACA-A TTATTAATATTATAT TERM 3012 2225744 - 2225774 + r 93 -9.9 -3.84873 | opp_overlap 2225743 2225734 2225745, overlap 2225740 2225737 2225732 2225745 CTAAATTATATTAAT ATGTTGCCATATA GTCAA TATATGGCAACAA TTATTAATATTATAT TERM 3013 2225745 - 2225773 + r 93 -13.4 -2.8984 | opp_overlap 2225743 2225734 2225745, overlap 2225744 2225740 2225737 2225732 TAAATTATATTAATA TGTTGCCATATA GTCAA TATATGGCAACA ATTATTAATATTATA TERM 3014 2225773 - 2225745 - R 100 -13.4 -3.23929 | opp_overlap 2225745 2225744 2225740 2225737 2225732, overlap 2225743 2225734 TAAATTATATTAATA TGTTGCCATATA GTCAA TATATGGCAACA ATTATTAATATTATA CPE1943 2227165 - 2225792 - | astB/chuR-related protein TERM 3015 2227217 - 2227191 - R 100 -14.6 -2.98947 | overlap 2227188 CCTAACTAAGAACTA TGGCAGCAACTT TAA AAGTTACTGCCA CTTAAGAATTTTTAT TERM 3016 2227562 - 2227510 - R 100 -15.5 -4.28656 | opp_overlap 2227518, overlap 2227518 ATTCAATACCTAAAA TGAAAAAATAGTTATTTTAATGCAT AAA ATACATTAAAATAACTATTTCTTTA AATTATACTAATCAA TERM 3017 2227518 - 2227554 + r 100 -12.7 -4.51765 | opp_overlap 2227518 2227510 CCTAAAATGAAAAAA TAGTTATTTTAATGCAT AAA ATACATTAAAATAACTA TTTCTTTAAATTATA TERM 3018 2227554 - 2227518 - R 100 -14.9 -5.46698 | opp_overlap 2227518, overlap 2227510 CCTAAAATGAAAAAA TAGTTATTTTAATGCAT AAA ATACATTAAAATAACTA TTTCTTTAAATTATA yajC 2227839 - 2227570 - | preprotein translocase subunit YajC tgt 2229020 - 2227878 - | queuine tRNA-ribosyltransferase queA 2230069 - 2229044 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase ruvB 2231131 - 2230091 - | Holliday junction DNA helicase B ruvA 2231750 - 2231145 - | Holliday junction DNA helicase motor protein TERM 3019 2231253 - 2231269 + g 81 -8.1 -4.21322 | overlap 2231250 TGTATATCCTAATGC CATTAAG GCA CTTAATG TTTCATTTATATTGA TERM 3020 2231932 - 2231910 - R 100 -7.8 -5.87996 | opp_overlap 2231910 TAAGTAATAAAAAAA GCCATATCTT AAT AAGACATAGC TATTGATTATATATA CPE1949 2232571 - 2231978 - | hypothetical protein TERM 3021 2232704 - 2232682 - R 100 -10.6 -5.56263 | ATCATAAAATAAAAA GGGAGTGATT AAA ATTCACTCCC AAAATAATTAATTAC cpdB 2236264 - 2232719 - | 2', 3'-cyclic nucleotide 2'-phosphodiesterase TERM 3022 2232879 - 2232892 + g 71 -4.5 -4.7657 | overlap 2232870 GGTGTTTCTGGGTTA CCTGG ATTT TCAGG TTTTTCAGGTTTTTC TERM 3023 2234017 - 2234028 + g 77 -5.8 -4.94262 | opp_overlap 2234017 GCTTAGCCCATTCAA CTGG TTCT CCAG TTTCTTTTTCATATA TERM 3024 2236503 - 2236464 - R 100 -14.8 -3.55801 | gap 1, opp_overlap 2236472, overlap 2236467 2236472 ATTAATCTTCTTAAA TAATAAAAGCAGTAAAGAA AAT TTCTTTACTGCTTTT-TTA GTCATTTTAAATTAA TERM 3025 2236501 - 2236467 - R 100 -14.6 -3.91488 | opp_overlap 2236472, overlap 2236464 2236472 AATCTTCTTAAATAA TAAAAGCAGTAAAGAA AAT TTCTTTACTGCTTTTT TAGTCATTTTAAATT TERM 3026 2236472 - 2236496 + r 100 -14.5 -5.25656 | opp_overlap 2236467 2236464 2236472 TCTTAAATAATAAAA GCAGTAAAGAA AAT TTCTTTACTGC TTTTTTAGTCATTTT TERM 3027 2236496 - 2236472 - R 100 -14.5 -5.00196 | opp_overlap 2236472, overlap 2236467 2236464 TCTTAAATAATAAAA GCAGTAAAGAA AAT TTCTTTACTGC TTTTTTAGTCATTTT cpdA 2240162 - 2236515 - | 2', 3'-cyclic nucleotide 2'-phosphodiesterase TERM 3028 2240334 - 2240287 - R 100 -10.2 -5.06472 | opp_overlap 2240287, overlap 2240279 ATATAAATAATAAAA TAGGATTTATTATGAAAGATTT TTTA AATTCCATCATAACAAATCCTA TTCTCTTTAAAATTA ptp 2241409 - 2240411 - | hypothetical protein TERM 3029 2240488 - 2240478 - G 72 -4 -5.0133 | TATTCTTTTAAAAAA TATG TTT CATA GCTACCATAAGTATC TERM 3030 2241210 - 2241228 + g 74 -7.6 -3.8372 | AACTCTTCATTTTCA CTTTTTAT AAA ATAAAAAG TTCTATTCTTAGGCT TERM 3031 2241848 - 2241818 - R 76 -9.4 -2.79239 | opp_overlap 2241842, overlap 2241814 CTATATTAAAATTTA TTTTTTATTTCATT AAA AATAAAATAAAAAA GATGAGCTGATTTAA TERM 3032 2241842 - 2241879 + r 78 -8.6 -3.97043 | opp_overlap 2241818 2241849, overlap 2241849 TCATTAAAAATAAAA TAAAAAAGATGAGCTG ATTTAA CAGCTCATCTTATATA TTATTCTATCTTGAA TERM 3033 2241872 - 2241849 - R 100 -11.1 -5.95449 | opp_overlap 2241849 2241842 AAATAAAATAAAAAA GATGAGCTG ATTTAA CAGCTCATC TTATATATTATTCTA TERM 3034 2241849 - 2241872 + r 95 -11.1 -3.78442 | opp_overlap 2241849, overlap 2241842 AAATAAAATAAAAAA GATGAGCTG ATTTAA CAGCTCATC TTATATATTATTCTA CPE1953 2242319 - 2241885 - | hemoglobin TERM 3035 2242681 - 2242628 - R 100 -15.1 -5.63645 | opp_overlap 2242628 TGAAAATACAAAAAA CACTCTTTCAATGTTTATATAAAAT TATT ATTTTATATTAACATTAAAAGGGTG TTCTCTTACTTTTAT TERM 3036 2242628 - 2242681 + r 100 -15.1 -3.84279 | opp_overlap 2242628 TGAAAATACAAAAAA CACTCTTTCAATGTTTATATAAAAT TATT ATTTTATATTAACATTAAAAGGGTG TTCTCTTACTTTTAT CPE1954 2243482 - 2242745 - | hypothetical protein CPE1955 2244261 - 2243608 - | hypothetical protein CPE1956 2245673 - 2244267 - | GntR family transcriptional regulator/aminotransferase CPE1957 2246590 - 2245688 - | nucleotidyltransferase domain protein TERM 3037 2245829 - 2245843 + g 93 -5 -6.08342 | overlap 2245831 ATCTATTTTAAACCC TTGGAA TTC TTCCGA TTTTTTTATTTCTTC CPE1958 2247105 - 2246632 - | hypothetical protein TERM 3038 2247215 - 2247183 - R 100 -13.8 -3.6968 | opp_overlap 2247188, overlap 2247188 TGACAATTGTAATAA TAAAAGCTAAATTC TTGTT GAATTTAGCTTTTA CTCATGAATTTAATA TERM 3039 2247210 - 2247188 - R 95 -9.3 -4.90079 | opp_overlap 2247188, overlap 2247183 ATTGTAATAATAAAA GCTAAATTC TTGTT GAATTTAGC TTTTACTCATGAATT TERM 3040 2247188 - 2247210 + r 89 -9.3 -4.31692 | opp_overlap 2247188 2247183 ATTGTAATAATAAAA GCTAAATTC TTGTT GAATTTAGC TTTTACTCATGAATT hflX 2249030 - 2247237 - | GTP binding protein hprT 2249137 - 2249661 + | hypoxanthine phosphoribosyltransferase TERM 3041 2249687 - 2249663 - T 85 -10.1 -3.24256 | opp_overlap 2249668, overlap 2249668 ACTGGGAAAAATAAT TAAAAGGAGGA ATT TCCTCCTTTTT TAATGGGCTAATTTG TERM 3042 2249682 - 2249668 - T 100 -10 -4.70739 | opp_overlap 2249668, overlap 2249663 GAAAAATAATTAAAA GGAGGA ATT TCCTCC TTTTTTAATGGGCTA TERM 3043 2249668 - 2249682 + T 100 -10 -5.15634 | opp_overlap 2249668 2249663 GAAAAATAATTAAAA GGAGGA ATT TCCTCC TTTTTTAATGGGCTA CPE1961 2250384 - 2249695 - | sporulation protein YunB TERM 3044 2249801 - 2249843 + g 74 -6.6 -4.2237 | gap 1, overlap 2249805 TCTGAAATTGGAATT TGAT-TTACCACTTCAACC TCTTTT GATTGAAGTGGTAATATTA TTTTAAGATTAGTTT TERM 3045 2249805 - 2249838 + g 93 -11.2 -3.70108 | overlap 2249801 AAATTGGAATTTGAT TTACCACTTCAACC TCTTTT GATTGAAGTGGTAA TATTATTTTAAGATT pbpA 2250521 - 2252560 + | penicillin-binding proteins 1A/1B TERM 3046 2252955 - 2252940 - g 79 -7.6 -4.28819 | AAACAATACAAATAA TGGAGT TATT ACTCCA CCTCAAGCTGGAAAT CPE1963 2252578 - 2253012 + | hypothetical protein TERM 3047 2253086 - 2253049 - f 100 -13.7 -4.1899 | opp_overlap 2253053, overlap 2253053 TGACCTTATTCAAAA CAAAGCCACTATGAATT TTTT ATTTCATAGTGGCTTTA TTATTGATAATTAGC TERM 3048 2253053 - 2253082 + F 100 -12.3 -4.49316 | opp_overlap 2253049 2253053 CTTATTCAAAACAAA GCCACTATGAATT TTTT ATTTCATAGTGGC TTTATTATTGATAAT TERM 3049 2253082 - 2253053 - f 100 -12.3 -4.68908 | opp_overlap 2253053, overlap 2253049 CTTATTCAAAACAAA GCCACTATGAATT TTTT ATTTCATAGTGGC TTTATTATTGATAAT CPE1964 2253306 - 2254706 + | amino acid carrier protein TERM 3050 2254703 - 2254751 + T 87 -10.1 -3.39844 | gap 1, opp_overlap 2254715, overlap 2254704 2254715 TGTAGAAGAATGGCA ATAATA-AAAAAAGCTTTGAGA TTTTTT TCTCAAAGCTTTTTTATATTAA TCTTTCAAATATAAC TERM 3051 2254704 - 2254750 + T 91 -13.6 -2.63585 | gap 1, opp_overlap 2254715, overlap 2254703 2254715 GTAGAAGAATGGCAA TAATA-AAAAAAGCTTTGAGA TTTTTT TCTCAAAGCTTTTTTATATTA ATCTTTCAAATATAA TERM 3052 2254715 - 2254738 + T 100 -9.7 -5.49569 | opp_overlap 2254715, overlap 2254704 2254703 GCAATAATAAAAAAA GCTTTGAGA TTTTTT TCTCAAAGC TTTTTTATATTAATC TERM 3053 2254738 - 2254715 - T 100 -9.7 -5.95946 | opp_overlap 2254704 2254703 2254715 GCAATAATAAAAAAA GCTTTGAGA TTTTTT TCTCAAAGC TTTTTTATATTAATC CPE1965 2255135 - 2254743 - | hypothetical protein TERM 3054 2254782 - 2254798 + g 81 -8.1 -4.20868 | TTTTTTCTCCACACT TAAATCC TTA GGATTTA TTGTTATTTTAAAAA CPE1966 2256157 - 2255183 - | GNAT family acetyltransferase CPE1967 2256585 - 2257124 + | DNA-binding protein TERM 3055 2257818 - 2257808 - g 74 -6.8 -4.29326 | GTGAAATTCAACAAA TGGG AAG CCCA GAAGATATATATAAT potA 2257156 - 2258205 + | spermidine/putrescine ABC transporter potB 2258208 - 2259053 + | spermidine/putrescine ABC transporter potC 2259047 - 2259847 + | spermidine/putrescine ABC transporter potD 2259849 - 2260931 + | spermidine/putrescine ABC transporter TERM 3056 2260932 - 2260963 + T 100 -13.2 -3.21772 | opp_overlap 2260937, overlap 2260937 AAGTGTGTTTATTAA AAAAATGCATGTGC AAAA GCACATGCATTTTA TATTATCCACAAATT TERM 3057 2260937 - 2260958 + T 100 -13.1 -4.73682 | opp_overlap 2260937, overlap 2260932 TGTTTATTAAAAAAA TGCATGTGC AAAA GCACATGCA TTTTATATTATCCAC TERM 3058 2260958 - 2260937 - T 100 -13.1 -5.52384 | opp_overlap 2260937 2260932 TGTTTATTAAAAAAA TGCATGTGC AAAA GCACATGCA TTTTATATTATCCAC ndk 2261397 - 2260966 - | nucleoside diphosphate kinase CPE1973 2261582 - 2261851 + | acylphosphatase CPE1974 2262146 - 2261991 - | hypothetical protein TERM 3059 2262092 - 2262104 + g 81 -2.7 -5.68489 | TACCATCATCAGGTT CATGA TCT TTATG TTTTTTATTATTATA CPE1975 2262882 - 2262316 - | hypothetical protein dacF 2263061 - 2264332 + | D-alanyl-D-alanine carboxypeptidase TERM 3060 2264377 - 2264325 - T 95 -12.8 -3.76888 | gap 2, opp_overlap 2264342, overlap 2264327 2264342 GACGTAGAAGAAATA TATTTTAATAAAAAAAAGATTTAGTC TTA GACTAAATCTTTTTTT-ATTAAAA-A CCTATTAAATTAAGA TERM 3061 2264376 - 2264327 - T 100 -17.9 -3.45784 | gap 1, opp_overlap 2264342, overlap 2264325 2264342 CGTAGAAGAAATATA TTTTAATAAAAAAAAGATTTAGTC TTA GACTAAATCTTTTTTT-ATTAAAA ACCTATTAAATTAAG TERM 3062 2264362 - 2264342 - T 100 -11.3 -6.09888 | opp_overlap 2264342, overlap 2264327 2264325 TTTTAATAAAAAAAA GATTTAGTC TTA GACTAAATC TTTTTTTATTAAAAA TERM 3063 2264342 - 2264362 + T 100 -11.3 -5.7946 | opp_overlap 2264342 2264327 2264325 TTTTAATAAAAAAAA GATTTAGTC TTA GACTAAATC TTTTTTTATTAAAAA TERM 3064 2264382 - 2264398 + T 71 -5.3 -4.57073 | opp_overlap 2264382 TTTATTAAAAACCTA TTAAATT AAG AATTTAA TTTTTCAACAAGATC CPE1977 2265031 - 2264387 - | pyrophosphatase PpaX TERM 3065 2265419 - 2265451 + H 100 -8.5 -5.94214 | opp_overlap 2265419 GGAGATGATTATACA GCCTTCGTCCTAT TAAAAAT ATAGGATGATGGC TTTTTTTATTGTCTT asnA 2265621 - 2266631 + | asparagine synthetase AsnA CPE1979 2266757 - 2267575 + | hypothetical protein TERM 3066 2267625 - 2267654 + F 91 -8.1 -5.08824 | opp_overlap 2267627 2267630 ATTCATTCTATAATG TATAAGGAACT TAAAAAAT AGTTCCTTATA TTTTTTGAATAAAAA CPE1980 2267687 - 2268064 + | lrgA family protein CPE1981 2268057 - 2268767 + | lrgB-like family protein TERM 3067 2268769 - 2268787 + F 90 -6 -5.98675 | opp_overlap 2268769 TAAAATTTGTCTAAA CAGTGATA AAA TTTCACTG TTTTTTCTTTTTATG TERM 3068 2269228 - 2269206 - g 73 -9.2 -2.53263 | opp_overlap 2269206 2269205 GTTATCCCTAAGGGA CTTCCTCCAC AAC ATGGAAGAAG AATTTTATTTCCCAT CPE1982 2268864 - 2269319 + | hypothetical protein topB 2271694 - 2269532 - | DNA topoisomerase TERM 3069 2269945 - 2269965 + g 95 -8.4 -5.36965 | CTTTTTTAACCTTCC CTCTTTCT ATATC AGAAAGAG TTTTTTCTAGTCTTC CPE1984 2273091 - 2271934 - | hypothetical protein TERM 3070 2272551 - 2272535 - G 72 -8.1 -3.31144 | opp_overlap 2272534 TTTCTATTTTTATAA TTAACAG CCT CTGTTAA AGTTTCTCTTAATAA TERM 3071 2273217 - 2273245 + r 76 -6.1 -4.75776 | opp_overlap 2273217 GCACTAAATAAAAAA TCCCTCTTATTCT ATT AAAATAAGAGAGA TTTTTAAATTACATT TERM 3072 2273245 - 2273217 - R 100 -10.5 -5.68438 | opp_overlap 2273217 GCACTAAATAAAAAA TCCCTCTTATTCT ATT AAAATAAGAGAGA TTTTTAAATTACATT CPE1985 2273760 - 2273254 - | TspO/MBR family protein TERM 3073 2273489 - 2273504 + g 74 -3.3 -5.38249 | opp_overlap 2273489 TGTATTATATAAAAC CAAAG GGCTGA CTTTG TTTTTTCTCCTTGCT CPE1986 2275833 - 2273797 - | sensor histidine kinase CPE1987 2277709 - 2275823 - | sensor histidine kinase TERM 3074 2276655 - 2276641 - G 76 -5 -5.055 | CTAACTCCCAAAAAA CTTCTA TTC CAGAAG TAACAAATGAAGCTT TERM 3075 2277619 - 2277609 - G 76 -2.6 -5.52384 | CGTGGATTAAAAAAA TATA CAG TATA TAAAATAATTGCTAT TERM 3076 2277848 - 2277813 - R 100 -14.3 -4.28432 | opp_overlap 2277815 2277824 AATTGTAATTTAAAA GACCTTAAATATTGG AATTAA CCAATATCTAAGGTC TCTAAGAAACTTTTA TERM 3077 2277815 - 2277846 + r 73 -8.9 -2.8806 | opp_overlap 2277813, overlap 2277824 TTGTAATTTAAAAGA CCTTAAATATTGG AATTAA CCAATATCTAAGG TCTCTAAGAAACTTT CPE1988 2278765 - 2277830 - | tetratricopeptide repeat protein TERM 3078 2278853 - 2278827 - R 80 -6.7 -5.07011 | gap 1, opp_overlap 2278827 TACATAAAGCAAAAA GGAG-GTATCAA AATT TTGACACACTCC TAATTAATACTCTAA CPE1989 2279806 - 2278886 - | hydrolase, alpha/beta fold family CPE1990 2280525 - 2279929 - | hypothetical protein TERM 3079 2280461 - 2280471 + g 70 -4 -4.92314 | CCTAATAATTCTGCT TCTT TTA AAGA TTTTTCTAAATTACT TERM 3080 2280614 - 2280585 - R 100 -13.9 -5.55769 | opp_overlap 2280561 2280583 2280592, overlap 2280566 2280608 TTTTATAATAAAAAA TGACTAATTTCTT AATT AAGAAATTAGTCA CCTTGAATAAGTATA CPE1991 2281941 - 2280811 - | hypothetical protein TERM 3081 2281964 - 2282002 + r 70 -7.6 -3.41795 | opp_overlap 2281966, overlap 2281966 2281970 TCCATAGTATATTAA AATACATAGGTCACTTAA GAG TAAAGTGACCTATATATA TTGTAATAAACATTT TERM 3082 2282000 - 2281966 - R 100 -12.4 -4.38171 | opp_overlap 2281966 2281964 2281970 CATAGTATATTAAAA TACATAGGTCACTTAA GAG TAAAGTGACCTATATA TATTGTAATAAACAT TERM 3083 2281966 - 2282000 + r 85 -10.2 -3.27653 | opp_overlap 2281966, overlap 2281964 2281970 CATAGTATATTAAAA TACATAGGTCACTTAA GAG TAAAGTGACCTATATA TATTGTAATAAACAT TERM 3084 2281970 - 2281996 + r 90 -11 -3.16203 | opp_overlap 2281966, overlap 2281966 2281964 GTATATTAAAATACA TAGGTCACTTAA GAG TAAAGTGACCTA TATATATTGTAATAA CPE1992 2282523 - 2281978 - | hypothetical protein coaE 2283132 - 2282533 - | dephospho-CoA kinase polA 2285749 - 2283149 - | DNA polymerase I CPE1995 2287000 - 2286083 - | glutaminase CPE1996 2287239 - 2287754 + | hypothetical protein TERM 3085 2287908 - 2287918 + G 71 -6.8 -3.98649 | opp_overlap 2287908 AGTAAATGTTCAAGA GGGT CAA ACCC TTGTTATATCTTCTC TERM 3086 2287945 - 2287976 + G 74 -8.8 -3.28712 | opp_overlap 2287951 2287955 TCTCCTGTAGAATGT GCAGAATTTACAAG AATG CTTGTTAAATCTGC TTATGAAAAAGGAGC CPE1997 2287837 - 2289072 + | aminopeptidase TERM 3087 2289176 - 2289126 - T 70 -4.5 -5.04249 | gap 1, opp_overlap 2289135 2289143 CCTTCAAAAAATAAA CACATG-TTTTAAATCCATATTTA TTTT TAAATATAATTTTAAAAACATATG CTAATTTAAAGTAAA TERM 3088 2289237 - 2289188 - T 88 -11.9 -2.85354 | opp_overlap 2289193, overlap 2289193 TATGCTAATTTAAAG TAAAAGGCAAAGAATAACTTA TTTTAATG TAAATTATTCTTTGCCTTTTT TATATAAATTATTTT TERM 3089 2289232 - 2289193 - T 100 -11.8 -4.5852 | opp_overlap 2289193, overlap 2289188 TAATTTAAAGTAAAA GGCAAAGAATAACTTA TTTTAATG TAAATTATTCTTTGCC TTTTTTATATAAATT TERM 3090 2289193 - 2289232 + T 100 -10.3 -5.38951 | opp_overlap 2289193 2289188 TAATTTAAAGTAAAA GGCAAAGAATAACTTAT TTTAAT GTAAATTATTCTTTGCC TTTTTTATATAAATT CPE1998 2290334 - 2289285 - | hypothetical protein CPE1999 2291361 - 2290351 - | hypothetical protein TERM 3091 2291630 - 2291618 - R 80 -3.5 -5.95449 | opp_overlap 2291618 AAATAAAACAAAAAA TATAA CTT TTATA ATTTCAAATACTTTT TERM 3092 2291870 - 2291848 - R 80 -2.8 -6.09196 | gap 1, opp_overlap 2291848 2291852, overlap 2291852 TGTAAAATAAAAAAA CACTTAGGT ATTATA ACCTA-GTG TTTTATAAATACGAG CPE2000 2292529 - 2292272 - | hypothetical protein TERM 3093 2292613 - 2292562 - R 83 -11.3 -2.70528 | opp_overlap 2292562 2292574, overlap 2292574 ATTACTTATACATCA TTATATGAAAAAGAACTTGTTTT CTCCAT AAAACAAGCTCTTTTTCCTAAAA GTTTATTATAAAATT TERM 3094 2292562 - 2292613 + r 75 -9.1 -3.19226 | opp_overlap 2292562 2292574, overlap 2292574 ATTACTTATACATCA TTATATGAAAAAGAACTTGTTTT CTCCAT AAAACAAGCTCTTTTTCCTAAAA GTTTATTATAAAATT TERM 3095 2292574 - 2292601 + r 73 -5.7 -4.73388 | opp_overlap 2292562 2292574, overlap 2292562 TCATTATATGAAAAA GAACTTGTTTT CTCCAT AAAACAAGCTC TTTTTCCTAAAAGTT TERM 3096 2292601 - 2292574 - R 86 -7.9 -4.82667 | opp_overlap 2292574 2292562, overlap 2292562 TCATTATATGAAAAA GAACTTGTTTT CTCCAT AAAACAAGCTC TTTTTCCTAAAAGTT CPE2001 2293380 - 2292691 - | radical SAM domain protein TERM 3097 2293156 - 2293183 + g 74 -6.4 -4.36596 | CTCTTCTAAGGTTTC CTTTGGAAGT TCAAAAAC ACTTCCAGAG TTTATTACTTCTAAA CPE2002 2293955 - 2293398 - | hypothetical protein CPE2003 2294954 - 2293974 - | nucleoside hydrolase, IUNH family TERM 3098 2295387 - 2295352 - R 70 -6.2 -4.3739 | opp_overlap 2295355, overlap 2295354 GATTTTTTTATAAAA TTTTAGGTATGGCGTA ATAC CACACCATACCTATTA TATAATAAAATCACA TERM 3099 2295385 - 2295354 - R 72 -8.8 -2.52946 | opp_overlap 2295355, overlap 2295352 TTTTTTTATAAAATT TTAGGTATGGCGTA ATAC CACACCATACCTAT TATATAATAAAATCA TERM 3100 2295355 - 2295384 + r 83 -9.4 -3.54951 | opp_overlap 2295354 2295352 TTTTTTATAAAATTT TAGGTATGGCGT AATACC ACACCATACCTA TTATATAATAAAATC CPE2004 2296256 - 2295468 - | hypothetical protein CPE2005 2296945 - 2296256 - | hypothetical protein CPE2006 2297846 - 2296959 - | hypothetical protein TERM 3101 2297590 - 2297600 + g 76 -2.6 -5.5943 | opp_overlap 2297590, overlap 2297597 TTTACATCTTTAAAA TTTA TCC TAAA TTTTTTTAATCCTTT TERM 3102 2298073 - 2298049 - R 100 -10.1 -5.65513 | opp_overlap 2298051 TATTAACTAAAAAAA GATTAGCACCT TTA AGGCACTAATC TTAAGATACTAATCT sigA 2299203 - 2298082 - | RNA polymerase sigma factor RpoD TERM 3103 2298773 - 2298786 + g 82 -5.3 -5.46657 | overlap 2298778 2298781 ACAACAAGTCTTAAG TTAGC CTCT GCTAA TTTTTTCTTAGCATA dnaG 2300996 - 2299209 - | DNA primase TERM 3104 2299402 - 2299388 - G 74 -7.2 -3.95725 | AATCTCTAACAAGAA CTTCTA TAT TAGAAG AATGATCTAGAATAA TERM 3105 2299908 - 2299922 + g 85 -5.8 -5.43866 | opp_overlap 2299907 TCTAGCCCTATGAAG CTTATA ATC TATAAG TTTTTTTGCAGATTG dgtP 2302193 - 2301165 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 3106 2303255 - 2303269 + G 70 -8.6 -2.54702 | ATATAATTCAATTGC TCCTCT TAC AGAGGA TGACTTCAAATATGT cotS 2302395 - 2303474 + | spore coat protein TERM 3107 2303471 - 2303511 + T 100 -17.3 -3.00213 | opp_overlap 2303476 2303480, overlap 2303476 2303480 ATTTAAAATTAAAGT TTAAATAAAGGAGTATTCA TAA TGAATACTCCTTTATTTTA TATAATCTTATTTAT TERM 3108 2303476 - 2303506 + T 100 -17.2 -4.61147 | opp_overlap 2303476 2303480, overlap 2303471 2303480 AAATTAAAGTTTAAA TAAAGGAGTATTCA TAA TGAATACTCCTTTA TTTTATATAATCTTA TERM 3109 2303506 - 2303476 - T 100 -17.2 -3.74781 | opp_overlap 2303476 2303471 2303480, overlap 2303480 AAATTAAAGTTTAAA TAAAGGAGTATTCA TAA TGAATACTCCTTTA TTTTATATAATCTTA TERM 3110 2303480 - 2303502 + T 100 -13.6 -4.84146 | opp_overlap 2303476 2303480, overlap 2303476 2303471 TAAAGTTTAAATAAA GGAGTATTCA TAA TGAATACTCC TTTATTTTATATAAT TERM 3111 2303502 - 2303480 - T 100 -13.6 -4.4784 | opp_overlap 2303480 2303476 2303471, overlap 2303476 TAAAGTTTAAATAAA GGAGTATTCA TAA TGAATACTCC TTTATTTTATATAAT podK 2306156 - 2303526 - | pyruvate phosphate dikinase CPE2012 2306889 - 2306257 - | CBS domain protein CPE2013 2307720 - 2307094 - | hypothetical protein TERM 3112 2307425 - 2307450 + g 75 -5.5 -4.81083 | overlap 2307418 2307428 CCTGCAGCTATCCCA GCATTAACTGG CATA TCAGTTAATAC TTTTTCATCCTTAAG recO 2308403 - 2307726 - | DNA repair protein RecO era 2309369 - 2308479 - | GTP-binding protein Era CPE2016 2309776 - 2309378 - | cytidine deaminase dgkA 2310518 - 2309820 - | diacylglycerol kinase/PAP2 family protein CPE2018 2311052 - 2310546 - | putative metalloprotease CPE2019 2313108 - 2311054 - | hypothetical protein spoIV 2314281 - 2313145 - | stage IV sporulation protein CPE2021 2314564 - 2314283 - | sporulation protein YqfC TERM 3113 2314695 - 2314649 - R 100 -17.7 -3.34424 | opp_overlap 2314655, overlap 2314655 AAAAACTAAGCAATA TAAAAAGGCATATACATAGCC CTTTT AGCTATGTATATGCCTTTTAA AACAATTCAAAAAAT TERM 3114 2314689 - 2314655 - R 100 -16.7 -5.1485 | opp_overlap 2314655, overlap 2314649 TAAGCAATATAAAAA GGCATATACATAGCC CTTTT AGCTATGTATATGCC TTTTAAAACAATTCA TERM 3115 2314655 - 2314689 + r 100 -16 -4.09739 | opp_overlap 2314655 2314649 TAAGCAATATAAAAA GGCATATACATAGC CCTTTTA GCTATGTATATGCC TTTTAAAACAATTCA TERM 3116 2314769 - 2314788 + r 91 -10.8 -3.62723 | opp_overlap 2314769, overlap 2314765 ATTATAAAAATAAAA GAGAGTTC TAAT GAACTCTC TTACTTATTTAAATA TERM 3117 2314788 - 2314769 - R 100 -10.8 -5.3658 | opp_overlap 2314769 2314765 ATTATAAAAATAAAA GAGAGTTC TAAT GAACTCTC TTACTTATTTAAATA CPE2022 2315238 - 2314789 - | GatB/Yqey domain protein rpsU 2315464 - 2315288 - | 30S ribosomal protein S21 CPE2024 2315928 - 2315584 - | HIT family protein CPE2025 2317301 - 2315997 - | MiaB-like tRNA modifying protein CPE2026 2318053 - 2317301 - | hypothetical protein prmA 2319017 - 2318076 - | ribosomal protein L11 methyltransferase TERM 3118 2319214 - 2319181 - R 95 -5.5 -6.06529 | gap 1 CACACATAAAAAAAA TAAAGGCTATAGTCTA TTA TTGAC-ATAACCTTTA AACTTAATCTTATTA CPE2028 2319600 - 2319244 - | GntR family transcriptional regulator CPE2029 2320780 - 2319602 - | hypothetical protein CPE2030 2321623 - 2320796 - | hypothetical protein CPE2031 2322302 - 2321610 - | ABC transporter TERM 3119 2322402 - 2322414 + r 79 -4.9 -5.59564 | CTAATACATCTACTT GTAAA TCA TTTAC TTTTTTTAAATTTAT TERM 3120 2322467 - 2322442 - R 100 -7.7 -5.76237 | opp_overlap 2322442 TATATAAACAAAAAA TACCCTAGTCA TTTC TAACTAGAGTA TTTTAAATTTACTAT dnaJ 2323642 - 2322479 - | chaperone protein DnaJ TERM 3121 2322552 - 2322565 + g 76 -6.7 -4.39133 | ACTGATTCCCCAGAT GCCTT CATA AAGGC TTTTAATGCTTCTTC TERM 3122 2323698 - 2323677 - R 100 -10.9 -4.87665 | opp_overlap 2323675 2323673 2323677 GTTTACTTATAAAAA GGGAAGACT ATTG AGCCTTCCC TCTATTAATTCTTTT TERM 3123 2323677 - 2323698 + r 75 -8.7 -3.25762 | opp_overlap 2323677, overlap 2323675 2323673 GTTTACTTATAAAAA GGGAAGACT ATTG AGCCTTCCC TCTATTAATTCTTTT dnaK 2325615 - 2323756 - | chaperone protein DnaK TERM 3124 2324061 - 2324075 + g 71 -7.2 -3.75015 | CATTTAAAGTTTTTT CTGTTT GGT AAACAG TTTGCTCAGCATTGT grpE 2326298 - 2325672 - | co-chaperone GrpE TERM 3125 2325833 - 2325845 + g 78 -6.3 -4.83615 | TTTCTGTAGATATTT CTTCA ACT TGAAG TTTTTCTAAAGCATC hrcA 2327348 - 2326329 - | heat-inducible transcription repressor hemN 2328678 - 2327545 - | coproporphyrinogen III oxidase TERM 3126 2328815 - 2328792 - R 100 -7.5 -5.89921 | opp_overlap 2328792 2328787 ATTACAATAAAAAAA GTCATGAGT GAATAA ACCCATGAC TTTTATATGATTCTT TERM 3127 2328792 - 2328815 + r 71 -5.3 -4.6391 | opp_overlap 2328792, overlap 2328787 ATTACAATAAAAAAA GTCATGAGT GAATAA ACCCATGAC TTTTATATGATTCTT CPE2037 2329217 - 2328948 - | hypothetical protein TERM 3128 2329351 - 2329386 + r 100 -15 -2.98942 | opp_overlap 2329351, overlap 2329356 GCTTTAAAAACAAAA GGCAATGATGAATACT TAAT ACTATTCATCATTGCC TCTATATAAAGAAAT TERM 3129 2329386 - 2329351 - R 100 -15 -5.26119 | opp_overlap 2329351 2329356 GCTTTAAAAACAAAA GGCAATGATGAATACT TAAT ACTATTCATCATTGCC TCTATATAAAGAAAT lepA 2331207 - 2329405 - | GTP-binding protein LepA TERM 3130 2329485 - 2329503 + g 85 -3.9 -5.80003 | overlap 2329494 TTCTCTTCTTACCTT CTTTTTG TTTTT CAAGAAG TTTTTTCTTTCTTGA TERM 3131 2330637 - 2330660 + g 85 -6 -5.35459 | CCTTAAGTGGAGCAT TTTCATCACC CTCT GGTGCTGGAA TTTTTTCTACTATCT CPE2039 2331690 - 2331328 - | hypothetical protein TERM 3132 2331727 - 2331698 - R 100 -8.7 -5.07652 | TTTTTCAAAATAAAA CACCCCCATAGAT TACT ATCTATAAGGATG TTCAAAATTCTTTTA spoIIP 2332830 - 2331745 - | stage II sporulation protein P gpr 2333956 - 2332979 - | germination protease TERM 3133 2334294 - 2334284 - g 76 -6.8 -4.4846 | overlap 2334290 CAAGCTAATAACAAA GCAG AAG CTGC AACTTTATACGTTGA rpsT 2334152 - 2334415 + | 30S ribosomal protein S20 TERM 3134 2334422 - 2334444 + T 100 -9.2 -5.27476 | opp_overlap 2334421, overlap 2334423 ATGGCTTAATTATAT GGGTGTTAGA ATT TCTAACACCA TTTTCTTTTATTAGA TERM 3135 2334423 - 2334443 + T 95 -12.7 -3.74859 | opp_overlap 2334421, overlap 2334422 TGGCTTAATTATATG GGTGTTAGA ATT TCTAACACC ATTTTCTTTTATTAG TERM 3136 2334481 - 2334506 + T 100 -13.5 -5.47159 | opp_overlap 2334481 TCTTTAAGTAAAAAA TCCAGATTAGA ATCA TCTAATCTGGA TTTTTTATATTACAG TERM 3137 2334506 - 2334481 - T 100 -13.5 -5.26875 | opp_overlap 2334481 TCTTTAAGTAAAAAA TCCAGATTAGA ATCA TCTAATCTGGA TTTTTTATATTACAG holA 2335557 - 2334511 - | DNA polymerase III subunit delta CPE2044 2337211 - 2335601 - | hypothetical protein TERM 3138 2335698 - 2335710 + g 77 -4.9 -5.1963 | AAATTATCTTCTATG GATAT TGA ATATC TTTTTGTTAGTTCAA TERM 3139 2337112 - 2337079 - G 82 -7 -4.92385 | gap 1, opp_overlap 2337082 2337084, overlap 2337084 GATAGCTAAACAAAA TTAA-AGGTACAACT AAAAA AGCTGTACCTATTAA GTTAAAACTACCAAA TERM 3140 2337106 - 2337084 - G 85 -8.5 -4.37871 | opp_overlap 2337082 2337084, overlap 2337079 CTAAACAAAATTAAA GGTACAACT AAAAA AGCTGTACC TATTAAGTTAAAACT spoVAE 2337628 - 2337263 - | stage V sporulation protein AE spoVAD 2338703 - 2337684 - | stage V sporulation protein AD spoVAC 2339176 - 2338709 - | stage V sporulation protein AC TERM 3141 2339294 - 2339251 - R 100 -12.1 -5.72616 | overlap 2339252 ATCTATACAAAAAAA TGAGCATTATTTTATATGA TTACTT TCACATAAAATAATGCTCC TAAAACATTTCATTT TERM 3142 2339293 - 2339252 - R 100 -15.6 -4.01943 | overlap 2339251 TCTATACAAAAAAAT GAGCATTATTTTATATGA TTACTT TCACATAAAATAATGCTC CTAAAACATTTCATT sigF 2340069 - 2339314 - | sporulation sigma factor SigF TERM 3143 2339673 - 2339683 + g 70 -5.4 -4.57518 | CTAATTCATCTACAG TAGG ATC CCTA TTTAATTTTTTTATT spoIIAB 2340509 - 2340087 - | anti-sigma F factor spoIIAA 2340858 - 2340523 - | anti-sigma F factor antagonist TERM 3144 2340984 - 2340952 - R 95 -9.4 -4.77698 | opp_overlap 2340956 2340957 2340981 TAATACTAAAATAAA TTAAACCTATAGAA ACAAA CTCTATAGGCTTAA TAAGATATTAATTGT CPE2051 2343277 - 2340992 - | ATP-dependent protease TERM 3145 2341374 - 2341360 - G 71 -8.6 -2.83634 | opp_overlap 2341357, overlap 2341341 2341357 AAATCATAGCAATTA CTTCTG CCA CAGAAG CACTATCTCCTTCTA TERM 3146 2343440 - 2343417 - R 100 -12.6 -5.24129 | opp_overlap 2343417 TTCTTCGACAAAAAA GCCTATAGAA ATTT TTCTATAGGC TTTACTAAGTAAATA TERM 3147 2343417 - 2343440 + r 95 -12.6 -3.767 | opp_overlap 2343417 TTCTTCGACAAAAAA GCCTATAGAA ATTT TTCTATAGGC TTTACTAAGTAAATA deoC 2344152 - 2343478 - | deoxyribose-phosphate aldolase TERM 3148 2343526 - 2343550 + g 77 -5.7 -4.86621 | overlap 2343521 TATAGCTATTGAAGC TGATGCTCCTA TTC TAGTAGCACCA TTTTTGATTACAGCT TERM 3149 2344550 - 2344524 - g 78 -3 -5.52096 | AAATCGAAGAAAAAA CTATTCTTTGGA TAT TCCACAAATTAG TTGTTACTTTAATAG CPE2053 2344409 - 2344816 + | hypothetical protein TERM 3150 2344843 - 2344814 - T 86 -9.5 -3.8535 | opp_overlap 2344820, overlap 2344820 CAATTTAAACAAAGA TAAAAAGCTGTAT ATTA ATACAGCTTTTTT TATTTAAAACTTACA TERM 3151 2344837 - 2344820 - T 100 -8.5 -5.30448 | opp_overlap 2344820, overlap 2344814 AAACAAAGATAAAAA GCTGTAT ATTA ATACAGC TTTTTTTATTTAAAA TERM 3152 2344820 - 2344837 + T 100 -8.5 -5.95539 | opp_overlap 2344820 2344814 AAACAAAGATAAAAA GCTGTAT ATTA ATACAGC TTTTTTTATTTAAAA CPE2054 2347626 - 2345077 - | cation-transporting ATPase TERM 3153 2346984 - 2346999 + g 70 -4 -4.9181 | opp_overlap 2346982, overlap 2346982 2346993 CTAATCCATCTAATC TCTCTT TAAG AGGAGA TTTTTCCTCTTCTAT TERM 3154 2348555 - 2348542 - g 70 -3.9 -5.06816 | ACTTGCTAAGAAAAA TAACA TAAC TGTTA TTACAACTCCTCATG TERM 3155 2349110 - 2349096 - g 70 -8.6 -2.60992 | overlap 2349085 2349083 2349095 2349093 2349098 AACTTGCTGAAATAG CAGGAA TAG TTCCTG AAACATTTGCTAAAG CPE2055 2347871 - 2349520 + | putative manganese-dependent inorganic pyrophosphatase TERM 3156 2349564 - 2349533 - T 100 -11.8 -4.43309 | opp_overlap 2349538, overlap 2349538 TAATTTTAATTAAAA TAAAAGCAATCTCT AAAT AGAGATTGCTTTTT TATTTCCAATTTAAA TERM 3157 2349538 - 2349559 + T 100 -11.7 -5.64421 | opp_overlap 2349533 2349538 TTAATTAAAATAAAA GCAATCTCT AAAT AGAGATTGC TTTTTTATTTCCAAT TERM 3158 2349559 - 2349538 - T 100 -11.7 -5.18643 | opp_overlap 2349538, overlap 2349533 TTAATTAAAATAAAA GCAATCTCT AAAT AGAGATTGC TTTTTTATTTCCAAT CPE2056 2350070 - 2349564 - | hypothetical protein TERM 3159 2350261 - 2350279 + r 100 -10.4 -5.95946 | opp_overlap 2350261 ATAAACTAAAAAAAA GATGATGT AAA ACATCATC TTTTTTTATTATTCA TERM 3160 2350279 - 2350261 - R 100 -10.4 -6.0458 | opp_overlap 2350261 ATAAACTAAAAAAAA GATGATGT AAA ACATCATC TTTTTTTATTATTCA CPE2057 2350662 - 2350288 - | hypothetical protein TERM 3161 2350857 - 2350829 - R 100 -9.8 -5.5208 | gap 1, opp_overlap 2350822 2350829 TCATAATAGAAAAAA CTCTCC-TAAAGT TTTT ACTTTAAGGAGAG TTTTTTATTATATAC TERM 3162 2350829 - 2350857 + r 100 -9.8 -5.60689 | gap 1, opp_overlap 2350829, overlap 2350822 TCATAATAGAAAAAA CTCTCC-TAAAGT TTTT ACTTTAAGGAGAG TTTTTTATTATATAC CPE2058 2352266 - 2350872 - | glutamate decarboxylase TERM 3163 2352336 - 2352295 - R 71 -5.4 -4.68424 | opp_overlap 2352296 2352298, overlap 2352296 2352298 TAATTTAGCTAAAAA CCACTCTTAATCTCTTCA TAACTT TCAAGAAATTAAGAGTAA TTTTTAGTTATATAA TERM 3164 2352419 - 2352404 - R 72 -7.6 -3.52668 | opp_overlap 2352401 2352395 2352404 AAGTTATTTATATAA TACACC TTTT GGTGTA ATATTTAAATTCGTC TERM 3165 2352835 - 2352810 - R 100 -7.7 -5.65177 | opp_overlap 2352813 ATATTTATAAAAAAA GAAGTGAATCC TTAA AAATTCACTTC CATAAAATACATAAA CPE2059 2353907 - 2352852 - | hypothetical protein TERM 3166 2353246 - 2353214 - G 74 -7.1 -3.9644 | TTCCTAATACAATAA CTAATATGGACCATT TCC AACGCTCCTTATTAG TAAAAGTATTTTGTA TERM 3167 2354007 - 2353970 - R 100 -13 -4.3739 | opp_overlap 2353966 2353963, overlap 2353972 TATTTCTCTATAAAA TGTTTGAAGTAGCCTA TACTTT TAGGCTACTTCAAATA TAACTCTAATTTATT TERM 3168 2354005 - 2353972 - R 100 -15.6 -2.52946 | opp_overlap 2353966 2353963, overlap 2353970 TTTCTCTATAAAATG TTTGAAGTAGCCTA TACTTT TAGGCTACTTCAAA TATAACTCTAATTTA CPE2060 2355445 - 2354027 - | glutamate gamma-aminobutyrate antiporter TERM 3169 2354448 - 2354461 + g 70 -3.9 -5.1101 | GGAACTTCATGATTA TTAAC TTCA GTTAA TTTTTTAGGTAATAA TERM 3170 2355581 - 2355528 - R 93 -10.1 -3.89957 | opp_overlap 2355539 2355541, overlap 2355579 TTCAACAATTAACAA CTATTACCTAAGACAAAAATTTA TCACGCTC TAAATTTTTGTCTTGAATAATAG CTACCAACTATATTT TERM 3171 2356058 - 2356093 + r 83 -9.2 -3.65415 | opp_overlap 2356060, overlap 2356054 2356060 2356063 AAATTTAAACAAAAA AATAAGAGTTAGAGCA TAAA TACTCTAACTCTTATA TTACTTTATACTTCA TERM 3172 2356060 - 2356091 + r 95 -11.8 -3.39589 | opp_overlap 2356060, overlap 2356058 2356054 2356063 ATTTAAACAAAAAAA TAAGAGTTAGAGCA TAAA TACTCTAACTCTTA TATTACTTTATACTT TERM 3173 2356091 - 2356060 - R 100 -14 -5.96894 | opp_overlap 2356060 2356058 2356054 2356063 ATTTAAACAAAAAAA TAAGAGTTAGAGCA TAAA TACTCTAACTCTTA TATTACTTTATACTT TERM 3174 2356063 - 2356088 + r 79 -9.1 -3.81701 | opp_overlap 2356060, overlap 2356060 2356058 2356054 TAAACAAAAAAATAA GAGTTAGAGCA TAAA TACTCTAACTC TTATATTACTTTATA CPE2061 2359663 - 2356148 - | pyruvate-flavodoxin oxidoreductase TERM 3175 2357072 - 2357084 + g 72 -7.7 -3.57798 | overlap 2357079 TGAGTTAGCCCAAGC TGGTC CAT GACCA TTGTGGTTAGTTGTG TERM 3176 2357477 - 2357513 + g 72 -5.1 -4.8143 | CTCTTCAGTTTTTAA TGCTTTAGCAGCAACTA ACT TAGTTGAAGCAGGAGCA TTTTTAGCTTCTTCC CPE2062 2360193 - 2359768 - | flavodoxin TERM 3177 2359921 - 2359937 + g 83 -2.3 -5.97979 | opp_overlap 2359921 2359924, overlap 2359924 ATTATCCCAACCATA TGATC CAAATAA GATCA TTTTTTTGTTGTTAT murG 2361473 - 2360400 - | N-acetylglucosaminyl transferase CPE2064 2361658 - 2361837 + | small acid-soluble spore protein C1 TERM 3178 2361955 - 2361921 - T 83 -8 -4.64591 | opp_overlap 2361920 2361925, overlap 2361923 2361924 TAATTATATACAAAA CATTGGAGCAATATTT TTA AAATATTGCTCCTTTA ATTTTATAATCTAAA TERM 3179 2361953 - 2361923 - T 78 -8.4 -3.92276 | opp_overlap 2361920 2361925, overlap 2361921 2361924 ATTATATACAAAACA TTGGAGCAATATTT TTA AAATATTGCTCCTT TAATTTTATAATCTA TERM 3180 2361952 - 2361924 - T 90 -11.9 -2.94281 | opp_overlap 2361920 2361925, overlap 2361923 2361921 TTATATACAAAACAT TGGAGCAATATTT TTA AAATATTGCTCCT TTAATTTTATAATCT TERM 3181 2361925 - 2361951 + T 100 -15.4 -4.28487 | opp_overlap 2361924 2361923 2361921, overlap 2361920 TATATACAAAACATT GGAGCAATATTT TTA AAATATTGCTCC TTTAATTTTATAATC recJ 2363737 - 2361959 - | single-stranded-DNA-specific exonuclease RecJ CPE2066 2364960 - 2363749 - | peptidase, M16 family TERM 3182 2365185 - 2365201 + r 72 -8.1 -3.16921 | AGTTCTACTTACCTT CTTTTTC TAA GAAAAAG TTAATAAGCATTCCT CPE2067 2365755 - 2365174 - | DJ-1 family protein parC 2368700 - 2365761 - | DNA topoisomerase IV subunit A TERM 3183 2366999 - 2367013 + g 77 -8.6 -3.64541 | opp_overlap 2366998, overlap 2366996 TATCAGTGAATATAG CTAAGG TAT CCTTAG TATTTGATTTAATAA parE 2370666 - 2368714 - | DNA topoisomerase IV subunit B TERM 3184 2369967 - 2369948 - G 71 -5.8 -4.51847 | opp_overlap 2369966 AAATAATCTATAAAA TCTAAAAG TCCT CTTTCAGA ATAATATTCTTTACT CPE2070 2371720 - 2370650 - | tRNA 2-selenouridine synthase TERM 3185 2370748 - 2370759 + g 86 -3 -5.95539 | CATTTATCTCTAATT CATT TCTA AATG TTTTTTTCTTTGCAC TERM 3186 2371931 - 2371960 + r 100 -15.3 -3.37879 | opp_overlap 2371931, overlap 2371936 TTTTTACAGCAAAAA TATAAGACATCCA TTAA TGGATGTCTTATA TTGATTAAACTTCGT TERM 3187 2371960 - 2371931 - R 100 -15.3 -4.8048 | opp_overlap 2371931 2371936 TTTTTACAGCAAAAA TATAAGACATCCA TTAA TGGATGTCTTATA TTGATTAAACTTCGT TERM 3188 2371936 - 2371955 + r 91 -10.8 -3.76048 | opp_overlap 2371931, overlap 2371931 ACAGCAAAAATATAA GACATCCA TTAA TGGATGTC TTATATTGATTAAAC CPE2071 2373365 - 2371965 - | glycosyl transferase, group 2 family protein TERM 3189 2373234 - 2373250 + g 77 -8.1 -3.77089 | overlap 2373241 2373245 AAGCATTGCAAATTT CTTTTGA GGC TCAAAAG TCTTTGTATCTTTTT TERM 3190 2373418 - 2373435 + H 89 -4.3 -6.04419 | opp_overlap 2373434 TATAACAGTTGTTTA TATATTT TGTA AAATATA TTTTTTTGTTATTTT TERM 3191 2373578 - 2373521 - H 100 -11.2 -4.16681 | gap 1, opp_overlap 2373537 AATATCATCGTAAAA TTTTCATAGCAATTGATTCATAAAACA AAATA TATTTTATGAATCAATTGC-ACCAAAA CTTAAAATATTACTA TERM 3192 2374140 - 2374150 + H 79 -4 -5.70761 | opp_overlap 2374140, overlap 2374145 CTTAAAAGTTAATAC GTTT CTA AAAC TTTTTGTTTTATTTT TERM 3193 2374145 - 2374161 + H 79 -3.8 -5.65927 | opp_overlap 2374140, overlap 2374140 AAGTTAATACGTTTC TAAAAC TTTTT GTTTTA TTTTTTATTTAAATG TERM 3194 2374714 - 2374681 - g 76 -7.7 -3.98747 | opp_overlap 2374686 2374687, overlap 2374682 2374687 2374708 2374709 2374710 TAAAAAATTAGCAAA GGAAAACTTTTTAAA GGGA TTTAAAAAGCTTTCA GATTCTTCTAAAAAG TERM 3195 2374713 - 2374682 - g 87 -11.2 -2.97622 | opp_overlap 2374686 2374687, overlap 2374681 2374687 2374708 2374709 2374710 AAAAAATTAGCAAAG GAAAACTTTTTAAA GGGA TTTAAAAAGCTTTC AGATTCTTCTAAAAA TERM 3196 2374708 - 2374687 - g 81 -7.5 -4.59376 | opp_overlap 2374687 2374686, overlap 2374682 2374681 ATTAGCAAAGGAAAA CTTTTTAAA GGGA TTTAAAAAG CTTTCAGATTCTTCT CPE2072 2374217 - 2375455 + | putative UV damage endonuclease CPE2073 2375540 - 2376148 + | putative sporulation protein YtaF TERM 3197 2376290 - 2376232 - T 70 -7.2 -3.70505 | gap 1, opp_overlap 2376239 2376244 2376271, overlap 2376237 2376244 TAAAGTAACTTTAAA TAAAATAT-AAAAGGCCTTACTCTAGT AACTTA ACTAAAGTATGACCTTTTCATATTTTT AAAATTAATCAAATA TERM 3198 2376285 - 2376237 - T 81 -7.1 -4.90525 | gap 1, opp_overlap 2376239 2376244 2376271, overlap 2376232 2376244 TAACTTTAAATAAAA TAT-AAAAGGCCTTACTCTAGT AACTTA ACTAAAGTATGACCTTTTCATA TTTTTAAAATTAATC TERM 3199 2376277 - 2376244 - T 80 -6.8 -5.00136 | opp_overlap 2376239 2376244 2376271, overlap 2376237 2376232 AAATAAAATATAAAA GGCCTTACTCTAGT AACTTA ACTAAAGTATGACC TTTTCATATTTTTAA CPE2074 2377486 - 2376317 - | trans-2-enoyl-CoA reductase TERM 3200 2377715 - 2377698 - R 100 -7.7 -5.94713 | opp_overlap 2377693 2377698 2377700 ATTGTATAAAAAAAA GACACTC TATA GAGTGCC TTTTATATTTAACTT TERM 3201 2377698 - 2377715 + r 73 -5.5 -4.81359 | opp_overlap 2377698, overlap 2377693 2377700 ATTGTATAAAAAAAA GACACTC TATA GAGTGCC TTTTATATTTAACTT CPE2075 2379209 - 2377731 - | amino acid permease family protein TERM 3202 2379536 - 2379496 - R 86 -4.2 -5.94743 | opp_overlap 2379500 2379502, overlap 2379497 2379500 CAAAAAAAATAAAAA TTAATACTCATGCCTATT ATCTA AATAAACATGAGTATATA TAAAAATAATTTATT TERM 3203 2379532 - 2379500 - R 86 -9.4 -4.0464 | opp_overlap 2379500 2379502, overlap 2379496 2379497 AAAAATAAAAATTAA TACTCATGCCTATT ATCTA AATAAACATGAGTA TATATAAAAATAATT CPE2076 2381797 - 2379557 - | alpha-glucosidase CPE2077 2382739 - 2381846 - | ROK family protein TERM 3204 2382828 - 2382866 + r 100 -13.4 -4.2361 | opp_overlap 2382833, overlap 2382832 TTATTTATATTTTTA TAAAAGTAAACTCTATGC TTG GCATAGAGTTTACACTTA TTTTAAAATTATATT TERM 3205 2382832 - 2382862 + r 100 -14.2 -3.12437 | opp_overlap 2382833, overlap 2382828 TTATATTTTTATAAA AGTAAACTCTATGC TTG GCATAGAGTTTACA CTTATTTTAAAATTA TERM 3206 2382861 - 2382833 - R 100 -17.7 -4.39426 | opp_overlap 2382832 2382828 TATATTTTTATAAAA GTAAACTCTATGC TTG GCATAGAGTTTAC ACTTATTTTAAAATT CPE2078 2384328 - 2382880 - | hypothetical protein TERM 3207 2384229 - 2384240 + g 73 -5.8 -4.57353 | CTGTTTCTCCCTCTC CAGC ATTT GCTG TTTTGTCTGCTCCAC CPE2079 2384713 - 2385207 + | hypothetical protein TERM 3208 2385223 - 2385266 + T 95 -6.3 -6.04419 | gap 1, opp_overlap 2385225, overlap 2385225 AAATAAACATAGAAA AAGGCTATATCAAAAGTGAA CTTAC TTCAATT-TGATATAGCCTC TTTTTTTATTATTTT TERM 3209 2385264 - 2385225 - T 100 -8.9 -5.1634 | gap 1, opp_overlap 2385223 2385225 ATAAACATAGAAAAA GGCTATATCAAAAGTGAA CTTAC TTCAATT-TGATATAGCC TCTTTTTTTATTATT TERM 3210 2385225 - 2385264 + T 89 -8.9 -4.59954 | gap 1, opp_overlap 2385225, overlap 2385223 ATAAACATAGAAAAA GGCTATATCAAAAGTGAA CTTAC TTCAATT-TGATATAGCC TCTTTTTTTATTATT CPE2080 2388409 - 2385275 - | alpha-mannosidase CPE2081 2389683 - 2388727 - | ABC transporter CPE2082 2390669 - 2389701 - | ABC transporter TERM 3211 2390856 - 2390879 + r 75 -9.7 -2.61831 | opp_overlap 2390856, overlap 2390855 2390854 2390858 TTATAATAAAAAAAA GAGTTAGAG GCTAAA CTCTAACTC ACTTTTTCACATAAA TERM 3212 2390879 - 2390856 - R 100 -9.7 -6.17268 | opp_overlap 2390856 2390855 2390854 2390858 TTATAATAAAAAAAA GAGTTAGAG GCTAAA CTCTAACTC ACTTTTTCACATAAA moaC 2391375 - 2390899 - | molybdenum cofactor biosynthesis protein C TERM 3213 2390925 - 2390946 + g 72 -8.8 -3.04269 | overlap 2390927 ATTCTCCACTTTTTC CACCTAGT TTTTTT ACTAGGTG TATATCTCCTATAAC modB 2392070 - 2391414 - | molybdate ABC transporter permease TERM 3214 2391463 - 2391489 + g 79 -8.2 -4.0031 | opp_overlap 2391452 AAAGTTAAAATCACT GATATTAAAACT ATA AGTATTAATATC TTATTTGCTAAACCT modA 2392843 - 2392067 - | molybdenum ABC transporter moaB 2393319 - 2392828 - | molybdenum cofactor synthesis protein TERM 3215 2393368 - 2393356 - R 70 -2.7 -5.4756 | AATTTTAATAAAAAA GTCTA TAT TAAAC TATTGTTGATTTCTA TERM 3216 2393372 - 2393405 + r 70 -7 -3.6608 | opp_overlap 2393371 TCTATATTAAACTAT TGTTGATTTCTA AATATATAGC TAGAAATCAACA TTTACCTAAAATAAT TERM 3217 2393607 - 2393637 + r 87 -9.9 -3.41745 | opp_overlap 2393607 2393636 AGTTTCATAAAAAAA GCTGTACTCAAAA TTTAT TTTTGAATACAGC TTAATATTCTCAAGC TERM 3218 2393637 - 2393607 - R 100 -12.1 -5.61596 | opp_overlap 2393607, overlap 2393636 AGTTTCATAAAAAAA GCTGTACTCAAAA TTTAT TTTTGAATACAGC TTAATATTCTCAAGC CPE2087 2395183 - 2393660 - | DNA-binding response regulator, AraC family CPE2088 2396924 - 2395188 - | sensor histidine kinase CPE2089 2397146 - 2397823 + | hypothetical protein TERM 3219 2397907 - 2397857 - f 81 -8.8 -3.91798 | gap 1, opp_overlap 2397857 TAACTTTTAATTAAA CTTACAAATAGTATTAAGAAATC TCTAGT AATTTCCTAACAC-ATTTGTAAG TTTTATTATTAGCTT fmhB 2398089 - 2399426 + | FemAB family protein TERM 3220 2399458 - 2399421 - f 100 -13.1 -4.52897 | opp_overlap 2399432 2399449, overlap 2399432 ATAATGAATAAGAAA CAATAAAAAAAGAATGC ATAT GCATTCTTTTTTTATTT AAAAACTTTATATAA TERM 3221 2399432 - 2399447 + F 100 -7.6 -5.95539 | opp_overlap 2399421 2399432 GAAACAATAAAAAAA GAATGC ATAT GCATTC TTTTTTTATTTAAAA TERM 3222 2399447 - 2399432 - f 100 -7.6 -6.01369 | opp_overlap 2399432, overlap 2399421 GAAACAATAAAAAAA GAATGC ATAT GCATTC TTTTTTTATTTAAAA CPE2091 2399789 - 2400094 + | PadR family transcriptional regulator TERM 3223 2400099 - 2400135 + T 100 -9.7 -5.64006 | opp_overlap 2400099 AAATAAAATAAAAAA CTATAGTGGTATATA TTAATTT TCTATACCACTATAG TTTTTTTAATTAACT TERM 3224 2400135 - 2400099 - T 100 -9.7 -5.95449 | opp_overlap 2400099 AAATAAAATAAAAAA CTATAGTGGTATATA TTAATTT TCTATACCACTATAG TTTTTTTAATTAACT CPE2092 2400878 - 2400141 - | amino acid ABC transporter CPE2093 2402405 - 2400897 - | amino acid ABC transporter TERM 3225 2401372 - 2401361 - G 70 -5.8 -4.28762 | ATAATTGTACTAAAA GAGG TGTT CCTC TAAAGAATGATATGT TERM 3226 2402456 - 2402474 + H 70 -3.2 -5.37171 | TTATATTAATTCCCA TCAAAATT GTC AACTTTGA TTTTTATTTCGTATT CPE2094 2402578 - 2403357 + | hypothetical protein CPE2095 2403898 - 2403482 - | hypothetical protein TERM 3227 2404062 - 2404088 + r 95 -11 -3.68988 | opp_overlap 2404062 TTTAAAAATTAAAAA GGGATAAGTTAT CAA ACAACTTATCCC TTCTCTTAAATAAAA TERM 3228 2404088 - 2404062 - R 100 -13.2 -5.18355 | opp_overlap 2404062 TTTAAAAATTAAAAA GGGATAAGTTAT CAA ACAACTTATCCC TTCTCTTAAATAAAA CPE2096 2405226 - 2404405 - | hypothetical protein CPE2097 2406501 - 2405245 - | hypothetical protein virJ 2408065 - 2406617 - | two-component sensor histidine kinase TERM 3229 2407432 - 2407445 + g 76 -3.9 -5.43487 | opp_overlap 2407432, overlap 2407438 AGTCACCATCACCAA TTCTT TTAA AAGAA TTTTTTATATAATTT virI 2408753 - 2408055 - | two-component response regulator CPE2100 2409351 - 2408956 - | hypothetical protein CPE2101 2409774 - 2409484 - | hypothetical protein CPE2102 2411543 - 2409786 - | helicase domain protein TERM 3230 2410557 - 2410541 - G 73 -9.5 -2.71712 | opp_overlap 2410540 2410540, overlap 2410540 CCTCTGGTGGTAAAT CTCCATA GAT TATGGAG CATTTAATTCCCATC CPE2103 2411804 - 2412664 + | ribosomal protein L11 methyltransferase TERM 3231 2412924 - 2412906 - T 89 -9 -4.6902 | opp_overlap 2412905 2412906, overlap 2412913 GCATAAGTTCAAAAA TCCAAATT GAA AATTTGGA CTTTCACTTAAGTTT TERM 3232 2412906 - 2412924 + T 73 -9 -2.86965 | opp_overlap 2412906 2412913, overlap 2412905 GCATAAGTTCAAAAA TCCAAATT GAA AATTTGGA CTTTCACTTAAGTTT CPE2104 2413584 - 2413069 - | hypothetical protein CPE2105 2413976 - 2413602 - | hypothetical protein apbE 2415008 - 2413977 - | thiamine biosynthesis lipoprotein TERM 3233 2414531 - 2414544 + g 73 -3.9 -5.18561 | TATGAGGATTTAATT CTATA TTCT TATAG TTTTTTAAATCTTTA TERM 3234 2415104 - 2415050 - R 74 -8.4 -3.33899 | gap 1, opp_overlap 2415053 2415064 2415103, overlap 2415048 2415052 2415053 2415064 TAAAATTTAAATACA CATTTAGATT-AAAAGATGACTTTG ATTAAG CAAAATCATCTTTTAAATCTAATTA AGTAAACTTATTTAA TERM 3235 2415102 - 2415052 - R 75 -8.8 -3.21703 | gap 1, opp_overlap 2415053 2415064, overlap 2415050 2415048 2415053 2415064 AAATTTAAATACACA TTTAGATT-AAAAGATGACTTTG ATTAAG CAAAATCATCTTTTAAATCTAAT TAAGTAAACTTATTT TERM 3236 2415101 - 2415053 - R 86 -12.3 -2.51937 | gap 1, opp_overlap 2415053 2415064, overlap 2415052 2415050 2415048 2415064 AATTTAAATACACAT TTAGATT-AAAAGATGACTTTG ATTAAG CAAAATCATCTTTTAAATCTAA TTAAGTAAACTTATT TERM 3237 2415053 - 2415101 + r 82 -10.1 -3.08738 | gap 1, opp_overlap 2415053 2415052 2415050 2415048 2415064, overlap 2415064 AATTTAAATACACAT TTAGATT-AAAAGATGACTTTG ATTAAG CAAAATCATCTTTTAAATCTAA TTAAGTAAACTTATT TERM 3238 2415089 - 2415064 - R 75 -7 -4.36262 | opp_overlap 2415053 2415064, overlap 2415053 2415052 2415050 2415048 ACATTTAGATTAAAA GATGACTTTG ATTAAG CAAAATCATC TTTTAAATCTAATTA TERM 3239 2415107 - 2415130 + r 80 -6.2 -5.15167 | opp_overlap 2415106 2415107, overlap 2415103 TTAAATCTAATTAAG TAAACTTATT TAAA GATAAGTTTA TTTTTCTTCATAATC CPE2107 2418425 - 2415180 - | hypothetical protein CPE2108 2419484 - 2418438 - | hypothetical protein TERM 3240 2419189 - 2419208 + g 76 -2.9 -5.5353 | gap 1 CTATTATCTTTACTT GATGCACT ACTTA AG-GCATC TTTTTTATTACTATC TERM 3241 2419639 - 2419674 + r 82 -9.2 -3.36538 | opp_overlap 2419639, overlap 2419642 TAATAAACAAAAAAA TAAGCGTAAATTAGCA CTAT TACTAATCTACGCTTA TTCATAATTTCTATA TERM 3242 2419674 - 2419639 - R 100 -13.6 -6.08342 | opp_overlap 2419639 2419642 TAATAAACAAAAAAA TAAGCGTAAATTAGCA CTAT TACTAATCTACGCTTA TTCATAATTTCTATA CPE2109 2420134 - 2419685 - | hypothetical protein TERM 3243 2419962 - 2419982 + g 76 -9.9 -2.76884 | opp_overlap 2419953 2419966, overlap 2419953 2419961 2419960 2419966 GTTAAAGATTTCATT GAAAGAAAT CCT ATTTCTTTC CCTTTTTCTATATAT TERM 3244 2420194 - 2420207 + H 70 -3.9 -5.1848 | opp_overlap 2420194 TTACACCAAAATTTA TCTTT TAAA AAAGA TTTTTTACATTAATT TERM 3245 2420211 - 2420237 + H 80 -6.8 -5.07652 | overlap 2420215 TTTTAAAAAAGATTT TTTACATTAATT CCG AATTAATGTTAA TTTTATTTTAAAAAC TERM 3246 2420215 - 2420233 + H 75 -7.6 -3.93251 | overlap 2420211 AAAAAAGATTTTTTA CATTAATT CCG AATTAATG TTAATTTTATTTTAA TERM 3247 2420891 - 2420920 + G 79 -8.1 -3.95071 | opp_overlap 2420890 2420894, overlap 2420894 ACCTTATTAGCCAAT CAATTTTAACATT TTTC AATGGTAAAATTG TTGTTTGGAAATTTG CPE2110 2420422 - 2421111 + | hypothetical protein CPE2111 2421136 - 2421843 + | hypothetical protein TERM 3248 2421905 - 2421851 - T 70 -6.1 -4.19947 | opp_overlap 2421856, overlap 2421841 2421856 TAAAATAATTATAAA TTAAATACTCTGATTAAACATAT GATTTATGA ATAAGTTTAATCAGAGTATTTTT TATTTTTCCTATCTA TERM 3249 2421900 - 2421856 - T 95 -10.4 -4.17789 | opp_overlap 2421856, overlap 2421851 TAATTATAAATTAAA TACTCTGATTAAACATAT GATTTATGA ATAAGTTTAATCAGAGTA TTTTTTATTTTTCCT TERM 3250 2421856 - 2421900 + T 100 -10.4 -5.95286 | opp_overlap 2421856 2421851 TAATTATAAATTAAA TACTCTGATTAAACATAT GATTTATGA ATAAGTTTAATCAGAGTA TTTTTTATTTTTCCT CPE2112 2423722 - 2421968 - | subtilase family protein CPE2113 2425544 - 2423724 - | hypothetical protein TERM 3251 2424502 - 2424515 + g 80 -6.7 -4.78848 | opp_overlap 2424493 2424492 ATGAATGAAGATTCT TCTCC ACTA GGAGA TTTTATATTTAAGGA TERM 3252 2425357 - 2425367 + g 74 -5.4 -4.85618 | opp_overlap 2425352 TGTATATAAAGAATT GATG GAA CATC TTTTCTTAGTTGTTT CPE2114 2427146 - 2425791 - | 23S rRNA (uracil-5-)-methyltransferase RumA CPE2115 2427623 - 2427174 - | hypothetical protein TERM 3253 2427287 - 2427277 - G 86 -5.4 -5.56263 | opp_overlap 2427277 ATTACAAAATAAAAA GGAA TTC TTCC TTCTAAAGATATCTT selB 2429717 - 2427810 - | selenocysteine-specific translation elongation factor TERM 3254 2428668 - 2428692 + g 70 -8.5 -3.1541 | ATTTATTATTTTACC TCCCCCTAAGG TTA CCATAGGGGAA TAATTTCTTATAACT TERM 3255 2429504 - 2429468 - G 77 -9 -3.65522 | gap 1, overlap 2429474 2429477 CATCTAGGGCAATAA TTAG-AAGAACTACATC TAGT GATGTAGCTCCTGCTAA CATATTTTTGATGAA TERM 3256 2429497 - 2429474 - G 85 -10.4 -3.61089 | overlap 2429468 2429477 GGGCAATAATTAGAA GAACTACATC TAGT GATGTAGCTC CTGCTAACATATTTT TERM 3257 2429494 - 2429477 - G 79 -8.5 -3.92963 | overlap 2429474 2429468 CAATAATTAGAAGAA CTACATC TAGT GATGTAG CTCCTGCTAACATAT selA 2431106 - 2429718 - | selenocysteine synthase selD 2431863 - 2431123 - | selenophosphate synthetase CPE2119 2431965 - 2432156 + | hypothetical protein comEA 2432981 - 2432199 - | ComE operon protein dacF 2433177 - 2434511 + | D-alanyl-D-alanine carboxypeptidase TERM 3258 2434549 - 2434516 - T 100 -18.5 -5.32944 | opp_overlap 2434516 TTTATAATTAAAAAA CAAGTAGTTTTAAGC CAAT GCTTAAAACTACTTG TTTTTTAATTTATTT TERM 3259 2434516 - 2434549 + T 100 -18.5 -5.48163 | opp_overlap 2434516 TTTATAATTAAAAAA CAAGTAGTTTTAAGC CAAT GCTTAAAACTACTTG TTTTTTAATTTATTT CPE2122 2435439 - 2434543 - | hypothetical protein CPE2123 2436749 - 2435436 - | membrane-bound protein CPE2124 2437341 - 2436772 - | HD domain protein nadD 2437952 - 2437344 - | nicotinic acid mononucleotide adenylyltransferase TERM 3260 2437766 - 2437749 - G 78 -4.2 -5.47821 | opp_overlap 2437749 2437739 ATTTATGGAAAAAAA GCTATA TGGCTC TATAGC TTTTTTAACCATTTC TERM 3261 2437749 - 2437766 + g 72 -4.2 -5.07107 | opp_overlap 2437749, overlap 2437739 ATTTATGGAAAAAAA GCTATA TGGCTC TATAGC TTTTTTAACCATTTC TERM 3262 2437811 - 2437830 + g 73 -8.6 -3.09834 | CATCAGTTATATCTT TCCACTTC TTAT GAGGTGGA TTGCCTGCTGGCATG TERM 3263 2437972 - 2437990 + r 78 -5.4 -5.20216 | CTTCCCTTTTTTAGG TAATTCTA TCT TAGGATTA TTTTTTGATGCTCTG CPE2126 2438256 - 2437954 - | putative RNA-binding protein obgE 2439560 - 2438274 - | GTPase ObgE TERM 3264 2439651 - 2439631 - R 74 -4.7 -5.09762 | opp_overlap 2439631 2439648, overlap 2439625 ACTTTAATATAAAAA CACAGCTTT TTT AATGCTATG TTCTCATATGGTTAA TERM 3265 2439708 - 2439690 - R 100 -10.3 -4.90869 | opp_overlap 2439690 ATTATTAATCAAAAA GCACCCT AAGTA AGGGTGC TTTTATAAAACTAAA TERM 3266 2439690 - 2439708 + r 100 -10.3 -4.38712 | opp_overlap 2439690 ATTATTAATCAAAAA GCACCCT AAGTA AGGGTGC TTTTATAAAACTAAA rpmA 2440030 - 2439728 - | 50S ribosomal protein L27 CPE2129 2440339 - 2440034 - | hypothetical protein rplU 2440726 - 2440415 - | 50S ribosomal protein L21 rng 2442294 - 2440852 - | ribonuclease, Rne/Rng family TERM 3267 2441284 - 2441294 + g 86 -2.6 -6.04419 | AAATTCATCTTTTAA TATT TTT AATA TTTTTTTCTTGTTTT CPE2132 2443018 - 2442311 - | hypothetical protein CPE2133 2444849 - 2442996 - | radical SAM domain protein TERM 3268 2444904 - 2444929 + r 75 -9.2 -2.75267 | opp_overlap 2444904, overlap 2444901 2444906 TATCTATAATAAAAA GAGAAGTATA CCTCTT TATACTTCTC TCATATTAACAATTT TERM 3269 2444929 - 2444904 - R 100 -9.2 -5.20333 | opp_overlap 2444904 2444901 2444906 TATCTATAATAAAAA GAGAAGTATA CCTCTT TATACTTCTC TCATATTAACAATTT CPE2134 2445835 - 2444981 - | peptidase, M50 family TERM 3270 2445382 - 2445362 - G 70 -4 -4.94168 | opp_overlap 2445363, overlap 2445363 AGATAACAAAATAAA TGCTATTC CAAAT GAATAGCT TATCTTCATCAATAT TERM 3271 2445363 - 2445381 + g 71 -7.5 -3.71998 | opp_overlap 2445362 2445363 GATAACAAAATAAAT GCTATTC CAAAT GAATAGC TTATCTTCATCAATA CPE2135 2446674 - 2445832 - | hypothetical protein TERM 3272 2446780 - 2446817 + r 100 -11.7 -5.11112 | opp_overlap 2446780, overlap 2446785 ATAGATATAAAAAAA TAAAAGTATTAAAATCA TTAT TGATCTTAATACTTTTA TTTTTATTAGAATTT TERM 3273 2446817 - 2446780 - R 100 -13.9 -5.77988 | opp_overlap 2446780 2446785 ATAGATATAAAAAAA TAAAAGTATTAAAATCA TTAT TGATCTTAATACTTTTA TTTTTATTAGAATTT TERM 3274 2446785 - 2446812 + r 90 -7.2 -5.42605 | opp_overlap 2446780, overlap 2446780 TATAAAAAAATAAAA GTATTAAAATCA TTAT TGATCTTAATAC TTTTATTTTTATTAG spoVE 2447948 - 2446824 - | cell cycle protein, FtsW/RodA/SpoVE family TERM 3275 2448058 - 2448082 + r 82 -8.7 -4.10257 | opp_overlap 2448058, overlap 2448053 AAAGACTAATAAAAA GCTATCTCAAA AAA TTTGAAATAGC TTATATTTTTAAATT TERM 3276 2448082 - 2448058 - R 100 -10.9 -5.20606 | opp_overlap 2448058 2448053 AAAGACTAATAAAAA GCTATCTCAAA AAA TTTGAAATAGC TTATATTTTTAAATT minE 2448368 - 2448096 - | cell division topological specificity factor MinE minD 2449176 - 2448379 - | septum site-determining protein MinD minC 2449840 - 2449205 - | septum formation inhibitor TERM 3277 2449913 - 2449929 + r 71 -6.7 -4.13882 | overlap 2449911 ATAAATTAATTCTCA CTTTATA TTA TATAAAG TATTTTTAATTTATA TERM 3278 2450057 - 2450079 + r 74 -6.3 -4.70583 | opp_overlap 2450057, overlap 2450052 ATAATAATTTAAAAA CCCACAGAA ATTAA TTCTGTAGG TTTTATATTAATGAG TERM 3279 2450079 - 2450057 - R 88 -8.5 -4.82333 | opp_overlap 2450057 2450052 ATAATAATTTAAAAA CCCACAGAA ATTAA TTCTGTAGG TTTTATATTAATGAG CPE2140 2453158 - 2450087 - | penicillin-binding protein 2 TERM 3280 2452039 - 2452021 - G 71 -6 -4.4836 | opp_overlap 2452025 GAAGAAAATCTAAAA GATACTTC ATT GAAGTTTC TGCTGAATATTGAAT CPE2141 2453664 - 2453167 - | rod shape-determining protein MreD mreC 2454531 - 2453680 - | rod shape-determining protein MreC mreB 2455563 - 2454535 - | rod shape-determining protein TERM 3281 2454630 - 2454641 + g 73 -5.8 -4.65722 | opp_overlap 2454630 ATTCTGCTATATGAA CAGG CATT CCTG TTTCTTTATATATAA radC 2456266 - 2455583 - | DNA repair protein RadC maf 2456891 - 2456313 - | Maf-like protein TERM 3282 2457043 - 2457065 + r 75 -6.4 -4.53685 | opp_overlap 2457043, overlap 2457038 TTATAAAGAAAAAAA TGAAAGAG AATTTAA CTCTTTCA TTTTCATTATAATTT TERM 3283 2457065 - 2457043 - R 100 -6.4 -6.02919 | opp_overlap 2457043 2457038 TTATAAAGAAAAAAA TGAAAGAG AATTTAA CTCTTTCA TTTTCATTATAATTT CPE2146 2457920 - 2457117 - | hypothetical protein CPE2147 2459000 - 2458182 - | hypothetical protein TERM 3284 2459257 - 2459215 - R 76 -9.6 -2.80236 | opp_overlap 2459223, overlap 2459214 AAGCTAAGTTCAAAG CTTTATAAGGATTTATTA GTAACTG TAATAAACCCTTATAAAA ATCCAATAATTCTAA pepD 2460779 - 2459328 - | aminoacyl-histidine dipeptidase pykA 2460912 - 2462336 + | pyruvate kinase TERM 3285 2462345 - 2462377 + T 100 -13.7 -2.6927 | opp_overlap 2462350, overlap 2462350 AATATAATTTAATAT AAAAAGGATAGTACT AAA AGTACTATCCTTTTC TAATCTATAAAGCCT TERM 3286 2462350 - 2462372 + T 100 -13.6 -4.53163 | opp_overlap 2462350, overlap 2462345 AATTTAATATAAAAA GGATAGTACT AAA AGTACTATCC TTTTCTAATCTATAA TERM 3287 2462372 - 2462350 - T 100 -13.6 -5.1167 | opp_overlap 2462350 2462345 AATTTAATATAAAAA GGATAGTACT AAA AGTACTATCC TTTTCTAATCTATAA rpsA 2463589 - 2462453 - | 30S ribosomal protein S1 TERM 3288 2463725 - 2463697 - R 100 -10.5 -5.76237 | opp_overlap 2463700 TATATAAATAAAAAA TTACCTAATAACA TAT TGCCATTAGGTAA TTAAACAATTTAATC CPE2151 2463938 - 2463735 - | heavy metal binding protein CPE2152 2464807 - 2464043 - | hypothetical protein TERM 3289 2464976 - 2464957 - R 95 -7.2 -5.96219 | opp_overlap 2464957 2464954 2464942, overlap 2464942 TATTTATAAAAAAAA TTAAGGCC AAAA GACCTTAA TTATTTTTATATAGA guaB 2465383 - 2464973 - | inosine-5'-monophosphate dehydrogenase CPE2154 2466371 - 2465469 - | exonuclease family protein TERM 3290 2466571 - 2466616 + r 71 -5.8 -4.61873 | gap 1, opp_overlap 2466571 2466585 TTTAAATAAAAAAGG GGGC-TGTATCAAAATA TAAAAATAAAAGT TATTTTGATACATGCCC TTTTAATTTCTAAAA CPE2155 2468380 - 2466626 - | hypothetical protein CPE2156 2470340 - 2468553 - | mutS domain protein TERM 3291 2470543 - 2470589 + r 83 -6.2 -5.35365 | gap 1, opp_overlap 2470545, overlap 2470545 TAAAATTAAAATAAA AAGGCCATATCAAAACCTAAT AATAAA ATTAA-TTTTGATATGGCCTA TTTTTCTTATATTTT TERM 3292 2470545 - 2470587 + r 84 -8.8 -4.26142 | gap 1, opp_overlap 2470545, overlap 2470543 AAATTAAAATAAAAA GGCCATATCAAAACCTAAT AATAAA ATTAA-TTTTGATATGGCC TATTTTTCTTATATT TERM 3293 2470587 - 2470545 - R 100 -11 -5.56372 | gap 1, opp_overlap 2470545 2470543 AAATTAAAATAAAAA GGCCATATCAAAACCTAAT AATAAA ATTAA-TTTTGATATGGCC TATTTTTCTTATATT CPE2157 2472193 - 2470664 - | PTS system, glucose-specific IIBC component CPE2158 2473256 - 2472360 - | ABC transporter substrate-binding protein CPE2159 2476250 - 2473482 - | hypothetical protein TERM 3294 2475207 - 2475225 + g 77 -7.6 -4.05229 | opp_overlap 2475210, overlap 2475210 AATTCTAAGCTCTAT TAATTTAG TTT CTAAATTA TTTGATATTTCATTT CPE2160 2477382 - 2476240 - | phosphoesterase TERM 3295 2477097 - 2477067 - G 78 -10 -3.17075 | opp_overlap 2477063 2477075 TTTCCCCTAAGTTAA CCATATTATAAAAA AAT TTTTTATTATATGG ATCATGATTTCCTGC TERM 3296 2477476 - 2477443 - R 100 -16.3 -6.07627 | opp_overlap 2477443 2477446 ATTGTCAAAAAAAAA GACTACATAGAGGAT ATAA ATCCTCTATGTAATC TTTTTTGCGGTAGAA TERM 3297 2477443 - 2477476 + r 100 -14.1 -5.0538 | opp_overlap 2477443, overlap 2477446 ATTGTCAAAAAAAAA GACTACATAGAGGAT ATAA ATCCTCTATGTAATC TTTTTTGCGGTAGAA TERM 3298 2477446 - 2477473 + r 100 -14.4 -3.08726 | opp_overlap 2477443, overlap 2477443 GTCAAAAAAAAAGAC TACATAGAGGAT ATAA ATCCTCTATGTA ATCTTTTTTGCGGTA TERM 3299 2477565 - 2477610 + r 79 -5.1 -5.53991 | gap 1, opp_overlap 2477565 2477579, overlap 2477573 TTTAGAGTCATAATA TAGG-ATTTTTATAATGGTTAT TTA ATAATCATTATAATTATTCCTA TTTTTTTAATGAATC TERM 3300 2477573 - 2477601 + r 93 -9.9 -3.93177 | opp_overlap 2477565 2477579, overlap 2477565 CATAATATAGGATTT TTATAATGGTTAT TTA ATAATCATTATAA TTATTCCTATTTTTT CPE2161 2477842 - 2477660 - | small acid-soluble protein Ssp1 cpdC 2480159 - 2477982 - | 2`,3`-cyclic-nucleotide 2`-phosphodiesterase TERM 3301 2479084 - 2479115 + g 81 -7.4 -4.61147 | opp_overlap 2479084 AAGAAATCAATTAAT GGAGTATCTTCTAT ATGT ATAGTAGGTATTCC TTTTATGTAATCTTC TERM 3302 2480024 - 2480050 + g 71 -6.6 -3.91352 | ATCTTCCATGTATAT CTGAGGTTCCTA AGA TGGTAACCTTAG TTTCATTAGAAATCT TERM 3303 2480310 - 2480291 - R 100 -9.4 -5.96521 | opp_overlap 2480291 ATTAAGCAAAAAAAA TCAGTGAA TTAA TTCACTGA TTTTTTTGGCAGGGG TERM 3304 2480291 - 2480310 + r 100 -9.4 -5.40072 | opp_overlap 2480291 ATTAAGCAAAAAAAA TCAGTGAA TTAA TTCACTGA TTTTTTTGGCAGGGG TERM 3305 2480734 - 2480686 - R 100 -13.7 -4.45544 | opp_overlap 2480683 2480690, overlap 2480690 CTTCATCAATTAAAA TAAAGCATATATAATATAAATTT AAA AAATCAATATTATATATGCTCTA TACTTATGTGTTTAT TERM 3306 2480690 - 2480730 + r 82 -10.1 -3.05333 | opp_overlap 2480686 2480690, overlap 2480683 ATCAATTAAAATAAA GCATATATAATATAAATTT AAA AAATCAATATTATATATGC TCTATACTTATGTGT TERM 3307 2480730 - 2480690 - R 100 -12.3 -4.78981 | opp_overlap 2480690 2480683, overlap 2480686 ATCAATTAAAATAAA GCATATATAATATAAATTT AAA AAATCAATATTATATATGC TCTATACTTATGTGT CPE2163 2481379 - 2480759 - | CBS domain protein CPE2164 2481679 - 2482143 + | hypothetical protein CPE2165 2482137 - 2482841 + | glycoprotease family protein CPE2166 2482841 - 2483287 + | ribosomal-protein-alanine acetyltransferase TERM 3308 2483376 - 2483346 - T 82 -8.4 -4.45115 | opp_overlap 2483348 2483349, overlap 2483343 2483348 2483349 ACTAATATAAAATAA TATGGACTATATCA TTT TGATATAGTCCCTT TCTATTATCCTAAAT TERM 3309 2483374 - 2483348 - T 95 -11 -3.81271 | opp_overlap 2483348 2483349, overlap 2483346 2483343 2483349 TAATATAAAATAATA TGGACTATATCA TTT TGATATAGTCCC TTTCTATTATCCTAA TERM 3310 2483348 - 2483374 + T 100 -11 -4.29304 | opp_overlap 2483348 2483346 2483343 2483349, overlap 2483349 TAATATAAAATAATA TGGACTATATCA TTT TGATATAGTCCC TTTCTATTATCCTAA TERM 3311 2483349 - 2483373 + T 100 -14.5 -3.16859 | opp_overlap 2483349 2483348 2483346 2483343, overlap 2483348 AATATAAAATAATAT GGACTATATCA TTT TGATATAGTCC CTTTCTATTATCCTA TERM 3312 2483373 - 2483349 - T 100 -14.5 -2.87136 | opp_overlap 2483348 2483349, overlap 2483348 2483346 2483343 AATATAAAATAATAT GGACTATATCA TTT TGATATAGTCC CTTTCTATTATCCTA CPE2167 2483977 - 2483381 - | hypothetical protein TERM 3313 2484074 - 2484047 - R 100 -10.7 -5.63517 | opp_overlap 2484044 TTTTCAAATAAAAAA GCCCTGATACA TATACT TATATCAGGGC ATATAAATTCAGAAT TERM 3314 2484337 - 2484353 + r 71 -6.7 -4.11447 | AACTTAACCTTCTTT TTTCATT GAT AATGAAA TTCTCTTTCTTTTTA CPE2168 2486487 - 2484325 - | hypothetical protein TERM 3315 2486012 - 2486029 + g 85 -8.5 -4.61527 | ATATCCATAGCCCCT TGAAGAG CTTC CTCTTCA TTTTTAACACCTTTT CPE2169 2486599 - 2487942 + | peptidase family protein prfB 2489162 - 2488191 - | peptide chain release factor 2 TERM 3316 2489545 - 2489499 - R 100 -16.3 -4.72497 | opp_overlap 2489491 2489502 2489505 2489511, overlap 2489500 TATCTATTAATAAAA TTATAATTAAAAGCCTCTGCA AATAA TGCAAAGGCTTTTAATTATAT TAAACTACTTCTCTT TERM 3317 2489544 - 2489500 - R 100 -19.8 -3.42775 | opp_overlap 2489491 2489502 2489505 2489511, overlap 2489499 ATCTATTAATAAAAT TATAATTAAAAGCCTCTGCA AATAA TGCAAAGGCTTTTAATTATA TTAAACTACTTCTCT TERM 3318 2489502 - 2489542 + r 100 -15.8 -3.08283 | opp_overlap 2489500 2489499, overlap 2489505 2489511 CTATTAATAAAATTA TAATTAAAAGCCTCTGCA AATAA TGCAAAGGCTTTTAATTA TATTAAACTACTTCT TERM 3319 2489505 - 2489539 + r 100 -13.1 -3.67878 | opp_overlap 2489500 2489499, overlap 2489502 2489511 TTAATAAAATTATAA TTAAAAGCCTCTGCA AATAA TGCAAAGGCTTTTAA TTATATTAAACTACT TERM 3320 2489511 - 2489533 + r 83 -7.7 -4.56314 | opp_overlap 2489500 2489499, overlap 2489505 2489502 AAATTATAATTAAAA GCCTCTGCA AATAA TGCAAAGGC TTTTAATTATATTAA secA 2492067 - 2489545 - | preprotein translocase subunit SecA TERM 3321 2492177 - 2492165 - R 77 -3.5 -5.63504 | opp_overlap 2492165 AATTTTATAAAAAAA TTATT TAA AATAA TTCTCATTAGATTAT TERM 3322 2492261 - 2492282 + r 100 -11.7 -5.90231 | opp_overlap 2492261 ACATAAAAATAAAAA GATGTAGGT AAAA ACCTACATC TTTTTTTATATTTAT TERM 3323 2492282 - 2492261 - R 100 -11.7 -5.71295 | opp_overlap 2492261 ACATAAAAATAAAAA GATGTAGGT AAAA ACCTACATC TTTTTTTATATTTAT CPE2172 2492841 - 2492302 - | 30S ribosomal protein S30AE TERM 3324 2493050 - 2493072 + r 70 -4.8 -4.89339 | opp_overlap 2493051, overlap 2493051 GACAAAAAATAAAAA AGGACCATGA AAA TCATAGTCCC TTTTTATAGCTAGTT TERM 3325 2493051 - 2493071 + r 75 -8.3 -3.52519 | opp_overlap 2493051, overlap 2493050 ACAAAAAATAAAAAA GGACCATGA AAA TCATAGTCC CTTTTTATAGCTAGT TERM 3326 2493071 - 2493051 - R 100 -10.5 -6.07374 | opp_overlap 2493050 2493051 ACAAAAAATAAAAAA GGACCATGA AAA TCATAGTCC CTTTTTATAGCTAGT comFC 2493951 - 2493292 - | comFC protein CPE2174 2494889 - 2493927 - | hypothetical protein recD 2497141 - 2494907 - | helicase, RecD/TraA family nagA 2497278 - 2498414 + | N-acetylglucosamine-6-phosphate deacetylase TERM 3327 2498412 - 2498458 + T 72 -8.5 -3.25341 | gap 1, opp_overlap 2498425 2498428, overlap 2498425 TTAGTTCATAAAGCT TAATATAAAAAAAGTACTTTGA TTTT TCAAAGTGC-TTTTTTATTTTA TCTTAATCTTAAAAT TERM 3328 2498446 - 2498425 - T 87 -5.9 -5.80817 | opp_overlap 2498412 2498425, overlap 2498428 CTTAATATAAAAAAA GTACTTTGA TTTT TCAAAGTGC TTTTTTATTTTATCT TERM 3329 2498425 - 2498446 + T 100 -8.1 -5.8901 | opp_overlap 2498425 2498428, overlap 2498412 CTTAATATAAAAAAA GTACTTTGA TTTT TCAAAGTGC TTTTTTATTTTATCT TERM 3330 2498515 - 2498547 + T 85 -10.8 -3.09749 | opp_overlap 2498520, overlap 2498520 TTATAGAAAAATAAT AAAAAGCTTAGGAT ATAAA ATCCTAAGCTTTTC TATATATTAAAGATA TERM 3331 2498520 - 2498542 + T 100 -10.7 -4.68124 | opp_overlap 2498520, overlap 2498515 GAAAAATAATAAAAA GCTTAGGAT ATAAA ATCCTAAGC TTTTCTATATATTAA TERM 3332 2498542 - 2498520 - T 100 -10.7 -5.51353 | opp_overlap 2498515 2498520 GAAAAATAATAAAAA GCTTAGGAT ATAAA ATCCTAAGC TTTTCTATATATTAA metK 2499729 - 2498554 - | S-adenosylmethionine synthetase TERM 3333 2499737 - 2499763 + r 75 -9.6 -2.72855 | overlap 2499729 CTTCTCATGGCTAAT GCTATCTTACTA TCA TAATAAGATAGC TAATTCACCCCTTTC TERM 3334 2499918 - 2499951 + r 82 -8.3 -4.49389 | opp_overlap 2499918, overlap 2499913 TTGTTAATAAAAAAA TCTCTTCTCAAACCT TTAA AGATTTAAGAAGAGA TTTTAGTTATACACT TERM 3335 2499951 - 2499918 - R 100 -12.7 -5.7946 | opp_overlap 2499918 2499913 TTGTTAATAAAAAAA TCTCTTCTCAAACCT TTAA AGATTTAAGAAGAGA TTTTAGTTATACACT TERM 3336 2500155 - 2500132 - R 71 -6.8 -4.18934 | opp_overlap 2500124 2500132 TATTATTTTAATAAA GAGACACT TAATTAAT AGTGTCTC TTTCTGGTGGTGGAA TERM 3337 2500569 - 2500585 + r 72 -8.7 -2.62616 | TCGAACCTGTGACCC CCTGCTT GTA AGGCAGG TGCTCTCCCAGCTGA CPE2178 2501590 - 2500946 - | hypothetical protein CPE2179 2501696 - 2502226 + | putative sporulation protein YyaC TERM 3338 2502262 - 2502223 - T 100 -18.4 -6.47325 | opp_overlap 2502223 AAAAAACAAAAAAAA TTAACTATATATCTCTTA ATAT TAAGAGATATATAGTTAA TTTTACTCATCAATT TERM 3339 2502223 - 2502262 + T 100 -18.4 -4.31692 | opp_overlap 2502223 AAAAAACAAAAAAAA TTAACTATATATCTCTTA ATAT TAAGAGATATATAGTTAA TTTTACTCATCAATT mreV 2503302 - 2502265 - | cell shape determining protein TERM 3340 2503167 - 2503177 + g 70 -5.4 -4.61353 | CTTCTCCTACTGCTA GAAC TTT GTTC TTATTTTTGTCTATG TERM 3341 2503259 - 2503245 - G 77 -8.6 -3.64198 | CTTTCATATAGACAA GAACAG TTG CTGTTC CAAGGTCTATACCCA spoIIID 2503644 - 2503393 - | stage III sporulation protein D TERM 3342 2503670 - 2503718 + r 80 -8.4 -4.20868 | opp_overlap 2503675 2503685, overlap 2503679 2503682 TCCTTAAAAATATTC TTAAATTTTTAATCAGCTGCTT TTTAT AAGCAGCTGATTATGTATTAAA TTATTCTTTTACAGG TERM 3343 2503679 - 2503709 + r 100 -15.7 -3.16049 | opp_overlap 2503675 2503685, overlap 2503670 2503682 ATATTCTTAAATTTT TAATCAGCTGCTT TTTAT AAGCAGCTGATTA TGTATTAAATTATTC TERM 3344 2503682 - 2503706 + r 95 -13 -3.70553 | opp_overlap 2503675 2503685, overlap 2503679 2503670 TTCTTAAATTTTTAA TCAGCTGCTT TTTAT AAGCAGCTGA TTATGTATTAAATTA TERM 3345 2503703 - 2503685 - R 72 -8.9 -2.74514 | opp_overlap 2503682 2503679 2503670, overlap 2503675 TTAAATTTTTAATCA GCTGCTT TTTAT AAGCAGC TGATTATGTATTAAA CPE2182 2504489 - 2503719 - | hypothetical protein TERM 3346 2504567 - 2504549 - R 77 -7.6 -4.0827 | opp_overlap 2504566, overlap 2504566 ATACACGTATATAAA TCTTTTTT ATA AAAAAAGA ACAAGCAAAACTTAT TERM 3347 2504592 - 2504566 - R 100 -12.5 -5.60993 | opp_overlap 2504566 2504569 2504572, overlap 2504549 TTTTTTATAAAAAAA GAACAAGCAAA ACTTA TTTGCTTGTTC TTCTATTAAGCTATT TERM 3348 2504566 - 2504592 + r 95 -12.5 -3.68726 | opp_overlap 2504549 2504566, overlap 2504569 2504572 TTTTTTATAAAAAAA GAACAAGCAAA ACTTA TTTGCTTGTTC TTCTATTAAGCTATT TERM 3349 2504569 - 2504589 + r 78 -8.4 -3.96842 | opp_overlap 2504566, overlap 2504566 2504572 TTTATAAAAAAAGAA CAAGCAAA ACTTA TTTGCTTG TTCTTCTATTAAGCT spoIID 2505628 - 2504606 - | stage II sporulation protein D TERM 3350 2504744 - 2504760 + g 76 -6.7 -4.50976 | ACCATGTCCATACCC TAAACAT TTT ATGTTTA TTTTATCCTCTAAAA TERM 3351 2505559 - 2505546 - G 71 -2.4 -5.42131 | GAACTAGATAAAAAA CCAA AAAGTA TTGG TATAAAAACTATACT TERM 3352 2505739 - 2505719 - R 100 -14.1 -5.72207 | opp_overlap 2505719 TTTAAAGTAAAAAAA GTCAACAGC ACT GCTGTTGAC TTATATTCTACTTAT TERM 3353 2505719 - 2505739 + r 100 -14.1 -3.80597 | opp_overlap 2505719 TTTAAAGTAAAAAAA GTCAACAGC ACT GCTGTTGAC TTATATTCTACTTAT murA 2507005 - 2505740 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 3354 2505877 - 2505867 - G 74 -6.8 -4.21922 | CCAGCTAAAATCAAA GCAG CTC CTGC CCTTAAATCAGTTGC CPE2185 2507672 - 2507028 - | hypothetical protein TERM 3355 2507824 - 2507843 + r 95 -10.8 -4.09108 | opp_overlap 2507824 ATCATAATAAAAAAA GCATACAG TTTC CTGTATGC TTTATATAAATTACA TERM 3356 2507843 - 2507824 - R 100 -10.8 -5.89921 | opp_overlap 2507824 ATCATAATAAAAAAA GCATACAG TTTC CTGTATGC TTTATATAAATTACA atpE 2508255 - 2507854 - | F0F1 ATP synthase subunit epsilon atpB 2509668 - 2508271 - | F0F1 ATP synthase subunit beta TERM 3357 2508864 - 2508848 - G 76 -9.5 -3.13522 | opp_overlap 2508831 2508860, overlap 2508846 ATCTCTGTAGCAAGA GTTGGTT GGT AACCAAC AGCTGATGGTATTCT TERM 3358 2509271 - 2509323 + g 83 -10.8 -2.95388 | gap 1, opp_overlap 2509282 TCGATAACCTTTATT CCTGTCTCAAACATTTGAGGAACAA CTGA TTGTTCTTCAAATGATGGAG-CTGG TCTATGAATTGGATA TERM 3359 2509313 - 2509282 - G 95 -11.8 -3.53224 | opp_overlap 2509271 TATTCCTGTCTCAAA CATTTGAGGAACAA CTGA TTGTTCTTCAAATG ATGGAGCTGGTCTAT atpG 2510533 - 2509682 - | F0F1 ATP synthase subunit gamma TERM 3360 2510095 - 2510109 + g 72 -8.6 -2.95298 | opp_overlap 2510085, overlap 2510085 2510097 CTATAGTTGATGCAT CACCAA CGT TTGGTG TATCTCCTAAATCAA TERM 3361 2510560 - 2510595 + r 78 -7.7 -4.27584 | opp_overlap 2510560 2510562, overlap 2510563 CTCCATTCTTAAAAA TGTGGGCATAGCTTT AATTAA AAAGCTATGCTCTTA TTTTACATTAAGAAT TERM 3362 2510563 - 2510592 + r 100 -11.6 -4.25859 | opp_overlap 2510562 2510560, overlap 2510560 CATTCTTAAAAATGT GGGCATAGCTTT AATTAA AAAGCTATGCTC TTATTTTACATTAAG atpA 2512106 - 2510598 - | F0F1 ATP synthase subunit alpha atpD 2512656 - 2512117 - | F0F1 ATP synthase subunit delta atpF 2513138 - 2512659 - | F0F1 ATP synthase subunit B atpL 2513456 - 2513238 - | F0F1 ATP synthase subunit C atpI 2514191 - 2513517 - | F0F1 ATP synthase subunit A CPE2194 2514612 - 2514247 - | hypothetical protein TERM 3363 2515234 - 2515260 + r 95 -11 -3.66541 | opp_overlap 2515234 TTTTTCACAAAAAAA GATACTATCCCA AGA TAGGATAGTATC TTTAAAATATATATT TERM 3364 2515260 - 2515234 - R 100 -13.2 -5.60993 | opp_overlap 2515234 TTTTTCACAAAAAAA GATACTATCCCA AGA TAGGATAGTATC TTTAAAATATATATT atoB 2516472 - 2515294 - | acetyl-CoA acetyltransferase CPE2196 2517895 - 2516741 - | UDP-N-acetylglucosamine 2-epimerase TERM 3365 2517270 - 2517283 + g 85 -3.9 -5.79595 | TCTCTTCTATGTGCA GTTAT CATG ATAAC TTTTTTGTTTTCAAA TERM 3366 2517367 - 2517384 + g 72 -4.2 -5.07941 | GTTCCATAGCATCGA TTACAG TGTTAC CTGTAA TTTTTATGTCATTTT TERM 3367 2517955 - 2517916 - R 71 -5.5 -4.60041 | gap 2, opp_overlap 2517923, overlap 2517919 2517923 ATTTACCTCCAAAAA TAA-TTAA-TAGCTACTTA AAAT TAAGTAGCTATTTAAATTA TAACTATTTTGTTCC TERM 3368 2517950 - 2517919 - R 100 -10.4 -4.41633 | opp_overlap 2517923, overlap 2517916 2517923 TACCTCCAAAAATAA TTAATAGCTACTTA AAAT TAAGTAGCTATTTA AATTATAACTATTTT TERM 3369 2517923 - 2517946 + r 95 -11.2 -3.81339 | opp_overlap 2517919 2517916 2517923 TCCAAAAATAATTAA TAGCTACTTA AAAT TAAGTAGCTA TTTAAATTATAACTA TERM 3370 2517946 - 2517923 - R 95 -11.2 -3.74868 | opp_overlap 2517923, overlap 2517919 2517916 TCCAAAAATAATTAA TAGCTACTTA AAAT TAAGTAGCTA TTTAAATTATAACTA upp 2518588 - 2517959 - | uracil phosphoribosyltransferase TERM 3371 2518434 - 2518448 + g 88 -8.6 -4.46854 | GTTTCTATTTCTATT TCTTCC ATA GGAAGA TTTCTTGTTACCTCA CPE2198 2519082 - 2518633 - | ribose-5-phosphate isomerase B TERM 3372 2519184 - 2519156 - R 73 -7.7 -3.77722 | overlap 2519158 TTCAATGACTAATAA CACTACTTAATTT AAA AAATTAAATAGTA AGTCAAATAAAAAAG TERM 3373 2519182 - 2519158 - R 74 -8.1 -3.46813 | overlap 2519156 CAATGACTAATAACA CTACTTAATTT AAA AAATTAAATAG TAAGTCAAATAAAAA CPE2199 2519317 - 2519162 - | hypothetical protein CPE2200 2520398 - 2519346 - | Sua5/YciO/YrdC/YwlC family protein CPE2201 2521011 - 2520421 - | hypothetical protein TERM 3374 2521055 - 2521085 + r 90 -12.1 -3.10612 | opp_overlap 2521059, overlap 2521059 AAAACTATGTATTTT TAAAGCCTTACAT TATTC ATGTAAGGCTTTG TATATTAAAATTCAG TERM 3375 2521059 - 2521081 + r 95 -10.7 -4.21142 | opp_overlap 2521059, overlap 2521055 CTATGTATTTTTAAA GCCTTACAT TATTC ATGTAAGGC TTTGTATATTAAAAT TERM 3376 2521081 - 2521059 - R 91 -10.7 -3.57792 | opp_overlap 2521055 2521059 CTATGTATTTTTAAA GCCTTACAT TATTC ATGTAAGGC TTTGTATATTAAAAT prfA 2522172 - 2521090 - | peptide chain release factor 1 CPE2203 2523938 - 2522229 - | hypothetical protein TERM 3377 2523568 - 2523593 + g 72 -4.1 -5.08824 | gap 1, opp_overlap 2523574 2523575 ATTCCTTCAATAGCA CTTAAAC-TCCA ATC TGGAAGGTTAAG TTTTTTAAGTAAAAA tdk 2524621 - 2524022 - | thymidine kinase TERM 3378 2524736 - 2524747 + H 82 -3 -6.20267 | opp_overlap 2524734, overlap 2524734 ATACTTGTTAATAGT TGTT TAGC AACA TTTTTTTATTTTTGA rpmE 2524777 - 2524983 + | 50S ribosomal protein L31 TERM 3379 2524992 - 2525015 + F 100 -9.7 -5.38054 | TAAATAATTTCTTTA TGGGAAAGA CTCAAA TCTTTCCCA TTTTTGTTTATAAGG TERM 3380 2525117 - 2525101 - g 73 -3.7 -5.20216 | GATATGATGAAAAAA GTTCTTA TTT TAAGTAC ATCTACTGGTTATGG TERM 3381 2525264 - 2525276 + G 72 -7.7 -3.60505 | overlap 2525262 ACGATTTATGTGCAA GTTCC CTT GGAAC TCTTTATGGTCTACT CPE2206 2525092 - 2526216 + | putative monogalactosyldiacylglycerol synthase TERM 3382 2526244 - 2526201 - T 100 -15.8 -3.32536 | opp_overlap 2526201 2526206, overlap 2526192 2526206 AAATGATTCTTATAA TAAAAGAAGATATTAAAGTT TATA AACTTTAATATCTTCTTTTG TTTTGAAAACTTATT TERM 3383 2526201 - 2526244 + T 100 -18 -4.12599 | opp_overlap 2526192 2526201 2526206, overlap 2526206 AAATGATTCTTATAA TAAAAGAAGATATTAAAGTT TATA AACTTTAATATCTTCTTTTG TTTTGAAAACTTATT TERM 3384 2526206 - 2526239 + T 100 -15.7 -5.07652 | opp_overlap 2526192 2526201 2526206, overlap 2526201 ATTCTTATAATAAAA GAAGATATTAAAGTT TATA AACTTTAATATCTTC TTTTGTTTTGAAAAC TERM 3385 2526239 - 2526206 - T 100 -15.7 -4.77567 | opp_overlap 2526206 2526201, overlap 2526192 2526201 ATTCTTATAATAAAA GAAGATATTAAAGTT TATA AACTTTAATATCTTC TTTTGTTTTGAAAAC rho 2527698 - 2526259 - | transcription termination factor Rho TERM 3386 2527948 - 2527921 - R 100 -7.1 -5.99154 | opp_overlap 2527921 TATTAAATAAAAAAA GGACACCTAAC ATTTAA GTTAGATATCC TTAATATTTCTAAAA ctrA 2529571 - 2527964 - | CTP synthetase TERM 3387 2529638 - 2529652 + r 79 -5 -5.57396 | opp_overlap 2529637 TATAATGATAATTAC CTCATT TAG AATGGG TTTTTTATTGCTTGT TERM 3388 2529816 - 2529833 + r 100 -7.1 -6.09196 | opp_overlap 2529816, overlap 2529809 TATTGGAATTCATAA GTTGAAA TTAG TTTCAAC TTTTTTTATTTTAAA TERM 3389 2529895 - 2529868 - R 100 -9.2 -4.94222 | opp_overlap 2529868 AATAATTTATAAAAA TAAGGCTACCCC TTTT GGTATAGCCTTA TTTTTTATTTGAAGA TERM 3390 2529868 - 2529895 + r 93 -7 -5.63517 | opp_overlap 2529868 AATAATTTATAAAAA TAAGGCTACCCC TTTT GGTATAGCCTTA TTTTTTATTTGAAGA CPE2209 2530330 - 2529911 - | hypothetical protein CPE2210 2531333 - 2530353 - | hypothetical protein spoIIR 2532008 - 2531379 - | stage II sporulation protein R TERM 3391 2532047 - 2532072 + r 73 -2.9 -5.66684 | gap 1, opp_overlap 2532063, overlap 2532049 2532063 ATTATTACCAAGGAG TATTTTTTATAT ACA ATA-AAAAAATA TTTTTTTATAAATTA ipk 2532944 - 2532078 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 3392 2532164 - 2532154 - G 76 -6.8 -4.4874 | opp_overlap 2532154, overlap 2532148 TTTAAAAATTCAAAA GCTC TTT GAGC TGTTAGCATATCATC TERM 3393 2533063 - 2533028 - R 100 -10 -4.78077 | opp_overlap 2533019 2533028 GTTAATTAAAATAAA GAGAAATCTTCTAA ATTACCTA CTAGAAGATTTCTC TTTTAAATTATTTTT TERM 3394 2533028 - 2533063 + r 93 -9.3 -4.43173 | opp_overlap 2533028, overlap 2533019 GTTAATTAAAATAAA GAGAAATCTTCTA AATTACCTAC TAGAAGATTTCTC TTTTAAATTATTTTT cphA 2535704 - 2533080 - | cyanophycin synthetase TERM 3395 2533802 - 2533828 + g 81 -8.3 -4.31329 | TTTCCTGTAGGTATT TATTATTTTCA TTCAT TGAAAATAATA TTTTAGGCTTTTTAA TERM 3396 2534654 - 2534666 + g 78 -6.3 -4.74801 | overlap 2534649 CTTCATCTATTTTAA CCTTT GTT AAAGG TTTTTCATGCCCTTC cphB 2536518 - 2535691 - | cyanophycinase TERM 3397 2536583 - 2536611 + r 100 -11.9 -5.93809 | opp_overlap 2536583 TTTATTCATAAAAAA GAGTTTTACGACA TAA TATCGTAAAACTC TTTTTTTTATAAAAC TERM 3398 2536611 - 2536583 - R 100 -14.1 -5.28176 | opp_overlap 2536583 TTTATTCATAAAAAA GAGTTTTACGACA TAA TATCGTAAAACTC TTTTTTTTATAAAAC CPE2215 2538180 - 2536618 - | lysM domain protein TERM 3399 2537134 - 2537152 + g 70 -3.8 -5.02476 | overlap 2537136 TTTGCAATCAACTGT TTGAGTGG CAT CTACTCCA TTTTTTCCCAAGTCT TERM 3400 2537527 - 2537541 + g 73 -8.6 -3.13369 | AACATTGATTTTAGC CAAGCA AGA TGCTTG TACTTTATCTTCTCC TERM 3401 2538455 - 2538479 + r 100 -8.7 -6.11243 | opp_overlap 2538459 TTTTATACCATAGTT GAAAGATGG AAACCCA CCATCTTTC TTTTTTTTGTTAAAT TERM 3402 2538543 - 2538498 - R 100 -14.5 -4.41348 | opp_overlap 2538510, overlap 2538510 TTTTTGTTAAATAAA TAAAACAAAAAAGTTAGCTAA TTAA TTAGCTAACTTTTTTATTTAA CCAACAAAATCTAGT TERM 3403 2538531 - 2538510 - R 100 -10.3 -5.95449 | opp_overlap 2538510, overlap 2538498 AAATAAAACAAAAAA GTTAGCTAA TTAA TTAGCTAAC TTTTTTATTTAACCA TERM 3404 2538510 - 2538531 + r 100 -10.3 -5.63517 | opp_overlap 2538510 2538498 AAATAAAACAAAAAA GTTAGCTAA TTAA TTAGCTAAC TTTTTTATTTAACCA CPE2216 2538776 - 2538540 - | hypothetical protein CPE2217 2539826 - 2538939 - | peptidase family protein TERM 3405 2540019 - 2539997 - R 100 -7.7 -5.85244 | overlap 2539998 AAGCAAAATAAAAAA TGGTGCCTA ATTAG TAGGCACCT AAAATATAATTATCC TERM 3406 2540018 - 2539998 - R 100 -11.2 -4.07486 | overlap 2539997 AGCAAAATAAAAAAT GGTGCCTA ATTAG TAGGCACC TAAAATATAATTATC cotS 2541033 - 2540029 - | spore coat protein CotS CPE2219 2541142 - 2542269 + | mannosyltransferase B cotS 2543480 - 2542452 - | spore coat protein TERM 3407 2542632 - 2542653 + g 74 -8.9 -3.23165 | overlap 2542630 2542629 CTCTTTTTCTTCCTT TGATAAGTT GTTT AACTTATCA TACTTTTCTATAATA CPE2221 2544179 - 2543496 - | hypothetical protein cotS 2545194 - 2544187 - | spore coat protein CPE2223 2545323 - 2546468 + | mannosyltransferase B CPE2224 2547232 - 2546702 - | hypothetical protein CPE2225 2547796 - 2547425 - | hypothetical protein CPE2226 2547937 - 2548380 + | hypothetical protein TERM 3408 2549413 - 2549401 - g 73 -3.5 -5.19261 | opp_overlap 2549401 AAAGGGACTAAAAAA TAATT TTA AATTA CTTGATAATTCTTTT apbA 2548415 - 2549443 + | thiamin biosynthesis lipoprotein TERM 3409 2549522 - 2549464 - T 93 -13 -3.07534 | opp_overlap 2549464 2549470 2549480, overlap 2549470 AATTTATATAAATTA TTAAAACATAGCTTTTTATTAAAATTAA TAT TTCCTTTAAATAAAAAGCTATGTTCTAA TTAAATGTTTATTTA TERM 3410 2549464 - 2549522 + T 90 -10.8 -3.30513 | opp_overlap 2549464 2549470, overlap 2549470 2549480 AATTTATATAAATTA TTAAAACATAGCTTTTTATTAAAATTAA TAT TTCCTTTAAATAAAAAGCTATGTTCTAA TTAAATGTTTATTTA TERM 3411 2549516 - 2549470 - T 100 -9.8 -4.40993 | opp_overlap 2549464 2549470 2549480, overlap 2549464 TATAAATTATTAAAA CATAGCTTTTTATTAAAATTAA TAT TTCCTTTAAATAAAAAGCTATG TTCTAATTAAATGTT TERM 3412 2549470 - 2549516 + T 89 -9.8 -3.53767 | opp_overlap 2549470 2549464, overlap 2549464 2549480 TATAAATTATTAAAA CATAGCTTTTTATTAAAATTAA TAT TTCCTTTAAATAAAAAGCTATG TTCTAATTAAATGTT eutH 2550691 - 2549567 - | ethanolamine transporter TERM 3413 2550839 - 2550797 - R 70 -5.9 -4.24364 | gap 2 TAAATATATAAATAA GAATCGTATAAG--GCCCTTT TTA AAAAGACTTCTTATACGATCC CCTATTAAAATTTCT CPE2229 2551183 - 2550854 - | PTS system protein TERM 3414 2551418 - 2551378 - R 73 -2.7 -5.79595 | overlap 2551371 GTTTAAAATAAAAAA GGACATATATCAAGGTAAT AAA ATTTATTTGATATACATCC TTTATTAAACTAATT CPE2230 2552807 - 2551428 - | serine protease CPE2231 2553943 - 2552924 - | hydrolase, alpha/beta fold family TERM 3415 2553258 - 2553272 + g 70 -3.6 -5.0538 | TTACTTAAATTTTCC TCTAAA CCA TTTGGA TTTTTTAACATACCA TERM 3416 2553317 - 2553329 + g 76 -6.3 -4.56358 | opp_overlap 2553317 TGATGTTAATCCAAA GTATG AAC CATAC TTTTGTATAAATCTA CPE2232 2554977 - 2553958 - | O-sialoglycoprotein endopeptidase TERM 3417 2554082 - 2554108 + g 81 -7.4 -4.60073 | overlap 2554086 GTACAAAGTATTGGT GATGGGAATAAA ACC TTTATTCCTCTC TTTTCTCCTTCTCTA TERM 3418 2554086 - 2554104 + g 76 -9 -3.51909 | overlap 2554082 AAAGTATTGGTGATG GGAATAAA ACC TTTATTCC TCTCTTTTCTCCTTC TERM 3419 2555077 - 2555061 - H 75 -8.1 -3.54626 | opp_overlap 2555060 2555063 2555073 2555074 2555076 2555076, overlap 2555059 2555076 CAAGAAATGTAAATA CATAATG TTA CATTATG ATATAATCTATATTA TERM 3420 2555275 - 2555261 - g 74 -7.2 -3.95022 | TGTATGAAGAGCAAA TTGCTT ACG AAGCAA GAATTCAAAATCCTA CPE2233 2555119 - 2555751 + | hypothetical protein TERM 3421 2555940 - 2555917 - g 76 -7.6 -3.95449 | opp_overlap 2555917 CTAGAATATATGAAA TCTTAAAATC AAGT GATTCTAAGA TTTGTTTAATTATGT TERM 3422 2555917 - 2555940 + G 70 -5.4 -4.60886 | opp_overlap 2555917 CTAGAATATATGAAA TCTTAAAATC AAGT GATTCTAAGA TTTGTTTAATTATGT CPE2234 2555760 - 2556320 + | acyl-CoA thioesterase I TERM 3423 2556449 - 2556399 - T 93 -9.6 -4.61566 | gap 1, opp_overlap 2556402 2556439 CTTTAAAGCATAAAA TAAGACTAAAATTCAAAATTAAC TTAAAT ATTAA-TCTGAATTTTAGTCTTA TTAAAAATTAATTTT CPE2235 2557419 - 2556457 - | oxidoreductase, pyridine nucleotide-disulphide family CPE2236 2558023 - 2557451 - | hypothetical protein CPE2237 2558205 - 2560094 + | hypothetical protein TERM 3424 2560124 - 2560101 - T 95 -6.1 -6.00814 | gap 1, opp_overlap 2560102 2560103, overlap 2560103 AATAATTAAAAAAAA GAGAGCTGAT TTTAT ATCAGCTC-C TTTTTATTTTCTAGA TERM 3425 2560102 - 2560124 + T 85 -6.3 -5.54907 | opp_overlap 2560101 2560103, overlap 2560103 ATAATTAAAAAAAAG AGAGCTGAT TTTAT ATCAGCTCC TTTTTATTTTCTAGA TERM 3426 2560123 - 2560103 - T 100 -9.8 -4.61485 | opp_overlap 2560103 2560102, overlap 2560101 TAATTAAAAAAAAGA GAGCTGAT TTTAT ATCAGCTC CTTTTTATTTTCTAG TERM 3427 2560103 - 2560123 + T 93 -9.8 -3.91317 | opp_overlap 2560101 2560103, overlap 2560102 TAATTAAAAAAAAGA GAGCTGAT TTTAT ATCAGCTC CTTTTTATTTTCTAG TERM 3428 2560196 - 2560158 - T 100 -13.4 -5.79588 | opp_overlap 2560154 2560163 2560165 CTAAAACTAAAAAAA CAGTAGATAGTTTTGTTT TTT ACACCAAACTATCTACTG TCCCATATTTATACT CPE2238 2561756 - 2560233 - | putative lipoprotein CPE2239 2563188 - 2561773 - | two-component sensor histidine kinase CPE2240 2563836 - 2563369 - | two-component response regulator CPE2241 2564053 - 2563901 - | hypothetical protein TERM 3429 2564334 - 2564303 - R 100 -7.6 -5.88197 | opp_overlap 2564311 TTAAATACAAAAAAA GCTATAAATTAATA TAAC TATTAATTCATAAC TTAAATAATCTATTT TERM 3430 2566059 - 2566075 + r 82 -8.7 -4.13014 | CAGCGGACGAACCTT CCTGAGG AAA CCTTAGG TTTTCGGCCTGTGGG TERM 3431 2566644 - 2566654 + r 71 -6.8 -4.15453 | opp_overlap 2566633 GCAACGTGGTTCGGT CCTC CAC GAGG TTTTACCCTCGCTTC TERM 3432 2566880 - 2566891 + r 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 3433 2566954 - 2566969 + r 81 -10.4 -2.71011 | GTAGTATTTAGCCTT GGGAGG TGGT CCTCCC TGCTTCCCACAAGGT TERM 3434 2567120 - 2567137 + r 90 -9.9 -3.695 | opp_overlap 2567119 2567118 GTTCTGTCCACAACC CCGGAAA CAAG TTTCCGG TTTGGGCTCTTTCCC TERM 3435 2567278 - 2567263 - R 73 -9 -2.92371 | opp_overlap 2567263 2567260, overlap 2567265 ATTCACTTAATGATA CATGGG GTTT CCCATG TGAGTTTCCTCATTC TERM 3436 2567263 - 2567278 + r 72 -9 -2.69489 | opp_overlap 2567263 2567265, overlap 2567260 ATTCACTTAATGATA CATGGG GTTT CCCATG TGAGTTTCCTCATTC TERM 3437 2567799 - 2567819 + r 72 -8.4 -3.23853 | overlap 2567798 TCCAGAATTCATTGT CATCTTAG TTGTC CTAAGATG TATTCCTTAGAAAGG TERM 3438 2567845 - 2567864 + r 75 -9.2 -2.65808 | opp_overlap 2567836 2567833, overlap 2567842 2567842 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 3439 2569139 - 2569164 + r 72 -9.1 -2.61735 | overlap 2569138 2569146 CGGATTGCTCCTTTG GTTGAATGATG ATGC CATCTTTCAAC GTTATGCGGTATTAA TERM 3440 2569848 - 2569813 - R 87 -6.5 -5.29716 | gap 1, opp_overlap 2569818, overlap 2569818 TTAAGATAATAAAAA TATAA-GCTACTAATA AAAAA TACTAGTAGCTTTATA TTCATTCCTATTAAA TERM 3441 2569842 - 2569818 - R 78 -8 -4.20092 | opp_overlap 2569818, overlap 2569813 ATAATAAAAATATAA GCTACTAATA AAAAA TACTAGTAGC TTTATATTCATTCCT CPE2242 2570698 - 2569898 - | hypothetical protein smtA 2571689 - 2570886 - | S-adenosylmethionine-dependent methltransferase CPE2244 2571905 - 2572660 + | hypothetical protein CPE2245 2572779 - 2573081 + | hypothetical protein TERM 3442 2573148 - 2573106 - T 100 -16.8 -3.64371 | opp_overlap 2573113 2573144 2573146, overlap 2573113 AATTCACACTTTAAA TATAAAAGAGATATTATGTT TAA AACATAATATCTCTTTTTTA ATATGTATTAAGATT TERM 3443 2573113 - 2573141 + T 100 -14.9 -5.25893 | opp_overlap 2573113 2573106 ACTTTAAATATAAAA GAGATATTATGTT TAA AACATAATATCTC TTTTTTAATATGTAT TERM 3444 2573141 - 2573113 - T 100 -14.9 -4.79451 | opp_overlap 2573113, overlap 2573106 ACTTTAAATATAAAA GAGATATTATGTT TAA AACATAATATCTC TTTTTTAATATGTAT CPE2246 2573617 - 2573156 - | hypothetical protein CPE2247 2574219 - 2573650 - | hypothetical protein TERM 3445 2574365 - 2574330 - R 82 -10.6 -2.8937 | opp_overlap 2574339, overlap 2574339 ATATATTTTTATATA CAAAAAAAACCTCTCT TATT AGAGAGGTTTTTGGTG ATCTGCCAGGGAATC TERM 3446 2574356 - 2574339 - R 100 -9.9 -6.06529 | opp_overlap 2574339, overlap 2574330 TATATACAAAAAAAA CCTCTCT TATT AGAGAGG TTTTTGGTGATCTGC TERM 3447 2574339 - 2574356 + r 100 -9.9 -4.79223 | opp_overlap 2574339 2574330 TATATACAAAAAAAA CCTCTCT TATT AGAGAGG TTTTTGGTGATCTGC TERM 3448 2576165 - 2576181 + r 82 -8.7 -4.13014 | CAGCGGACGAACCTT CCTGAGG AAA CCTTAGG TTTTCGGCCTGTGGG TERM 3449 2576750 - 2576760 + r 71 -6.8 -4.15453 | opp_overlap 2576739 GCAACGTGGTTCGGT CCTC CAC GAGG TTTTACCCTCGCTTC TERM 3450 2576986 - 2576997 + r 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 3451 2577060 - 2577075 + r 81 -10.4 -2.71011 | GTAGTATTTAGCCTT GGGAGG TGGT CCTCCC TGCTTCCCACAAGGT TERM 3452 2577226 - 2577243 + r 90 -9.9 -3.695 | opp_overlap 2577225 2577224 GTTCTGTCCACAACC CCGGAAA CAAG TTTCCGG TTTGGGCTCTTTCCC TERM 3453 2577384 - 2577369 - R 73 -9 -2.92371 | opp_overlap 2577366 2577369, overlap 2577371 ATTCACTTAATGATA CATGGG GTTT CCCATG TGAGTTTCCTCATTC TERM 3454 2577369 - 2577384 + r 72 -9 -2.69489 | opp_overlap 2577369 2577371, overlap 2577366 ATTCACTTAATGATA CATGGG GTTT CCCATG TGAGTTTCCTCATTC TERM 3455 2577561 - 2577571 + r 73 -6.8 -4.19887 | opp_overlap 2577553, overlap 2577553 ATAGAAATTGGTTTT GCCA ATT TGGC TTGTTGTTTCTATAT TERM 3456 2577905 - 2577925 + r 72 -8.4 -3.23853 | overlap 2577904 TCCAGAATTCATTGT CATCTTAG TTGTC CTAAGATG TATTCCTTAGAAAGG TERM 3457 2579245 - 2579270 + r 72 -9.1 -2.61735 | overlap 2579244 2579252 CGGATTGCTCCTTTG GTTGAATGATG ATGC CATCTTTCAAC GTTATGCGGTATTAA TERM 3458 2579874 - 2579821 - R 95 -11.6 -3.37755 | gap 1, opp_overlap 2579821 2579827 2579869, overlap 2579827 ACATAGCTTGAAATA GA-AAAAGTATTAAAGAATCCTATT ATTAA AATAAGTTTCTTTAATACTTTTATC TTTTAAAAAAATAAA TERM 3459 2579821 - 2579874 + r 86 -9.4 -4.08767 | gap 1, opp_overlap 2579821 2579827, overlap 2579827 2579869 ACATAGCTTGAAATA GA-AAAAGTATTAAAGAATCCTATT ATTAA AATAAGTTTCTTTAATACTTTTATC TTTTAAAAAAATAAA TERM 3460 2579827 - 2579867 + r 88 -8.6 -4.89567 | opp_overlap 2579821 2579827, overlap 2579821 CTTGAAATAGAAAAA GTATTAAAGAATCCTATT ATTAA AATAAGTTTCTTTAATAC TTTTATCTTTTAAAA TERM 3461 2579867 - 2579827 - R 100 -10.8 -5.19879 | opp_overlap 2579827 2579821, overlap 2579821 CTTGAAATAGAAAAA GTATTAAAGAATCCTATT ATTAA AATAAGTTTCTTTAATAC TTTTATCTTTTAAAA TERM 3462 2579903 - 2579916 + r 76 -2.5 -5.82036 | AATATCTTTTACTTC TAAAT TATT ATTTA TTTTTTCTTTATTAT CPE2248 2580497 - 2579928 - | chromate transporter TERM 3463 2580025 - 2580015 - G 75 -4 -5.24129 | TTTTCTTATAAAAAA GAAT AAA ATTC CTGCTAGTATTAAAG CPE2249 2581035 - 2580484 - | chromate transporter CPE2250 2581458 - 2582162 + | hypothetical protein pepD 2583945 - 2582494 - | aminoacyl-histidine dipeptidase TERM 3464 2582708 - 2582724 + g 71 -2.3 -5.34655 | overlap 2582710 2582719 AATAAATCACTGTAA GTTTTAA TAC TTAAATC TTTTATTTTTGATTC TERM 3465 2584122 - 2584094 - R 100 -9 -5.10029 | opp_overlap 2584097, overlap 2584084 2584097 ATTAACCTTAAAAAA TAAGGGTTACAA AATCA TTGTAACCCTTG GTATTGGTGCACCTA TERM 3466 2584119 - 2584097 - R 100 -10.7 -4.63993 | opp_overlap 2584097, overlap 2584084 2584094 AACCTTAAAAAATAA GGGTTACAA AATCA TTGTAACCC TTGGTATTGGTGCAC TERM 3467 2584097 - 2584119 + r 90 -10.7 -3.39449 | opp_overlap 2584084 2584097 2584094 AACCTTAAAAAATAA GGGTTACAA AATCA TTGTAACCC TTGGTATTGGTGCAC TERM 3468 2584244 - 2584226 - R 100 -11.8 -6.09196 | opp_overlap 2584226 TTTAAAATAAAAAAA GATAACCG ATT CGGTTATC TTTTGAATGGAGCGG TERM 3469 2584226 - 2584244 + r 100 -11.8 -4.18018 | opp_overlap 2584226 TTTAAAATAAAAAAA GATAACCG ATT CGGTTATC TTTTGAATGGAGCGG TERM 3470 2584284 - 2584300 + r 75 -8.7 -3.25192 | overlap 2584281 ATCGAACCCGGGTAT CCAGCTT GGA AGGCTGG TGTTCTACCATTGAA TERM 3471 2584798 - 2584812 + r 70 -7.8 -3.322 | opp_overlap 2584781 CGAACCCCTGACCCA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT TERM 3472 2584908 - 2584924 + r 75 -8.7 -3.25192 | overlap 2584905 ATCGAACCCGGGTAT CCAGCTT GGA AGGCTGG TGTTCTACCATTGAA TERM 3473 2585517 - 2585531 + r 70 -7.8 -3.322 | opp_overlap 2585500 CGAACCCCTGACCCA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT TERM 3474 2585671 - 2585687 + r 75 -8.7 -3.25192 | overlap 2585668 ATCGAACCCGGGTAT CCAGCTT GGA AGGCTGG TGTTCTACCATTGAA TERM 3475 2585942 - 2585982 + r 87 -6.4 -5.41359 | opp_overlap 2585945, overlap 2585945 GTTTTCTTTTTAAAA AAAGTGCTAATACATAAG CTTTT TTTATGTATTAACACTTA TTTTTTAATTTAATT TERM 3476 2585945 - 2585979 + r 88 -8.1 -4.76088 | opp_overlap 2585945, overlap 2585942 TTCTTTTTAAAAAAA GTGCTAATACATAAG CTTTT TTTATGTATTAACAC TTATTTTTTAATTTA TERM 3477 2585979 - 2585945 - R 100 -9.6 -5.40072 | opp_overlap 2585945 2585942 TTCTTTTTAAAAAAA GTGCTAATACATAA GCTTTTT TTATGTATTAACAC TTATTTTTTAATTTA CPE2252 2586472 - 2586002 - | Ser/Thr protein phosphatase family protein CPE2253 2587098 - 2586484 - | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 3478 2586621 - 2586611 - G 74 -5.4 -4.91852 | GGTACGAAAAATAAA GGAT CAT ATCC AAAACCTTCATTTCC rnpH 2587846 - 2587100 - | ribonuclease PH TERM 3479 2587504 - 2587515 + g 71 -3 -5.31275 | GAAGAACGTCACAGT CTAT CCAA ATAG TTTTTTCTCCTAAAG TERM 3480 2589416 - 2589455 + G 71 -4.6 -4.73613 | opp_overlap 2589398, overlap 2589396 AAAATATGTTTATAT TCTTTGTATTTATAAATA GTTT TATTGATAAATATATAGA TTTTATTACTGATAC CPE2255 2588068 - 2589771 + | hypothetical protein CPE2256 2591495 - 2589975 - | oligopeptide-binding protein TERM 3481 2591973 - 2591948 - R 78 -6.3 -5.01546 | opp_overlap 2591948 AAATTTATATAAAAA TGCTTATTTCA CCCT CAAAATAAGCA TTTAAAACTTAACTT TERM 3482 2592202 - 2592177 - R 78 -6.3 -5.01546 | opp_overlap 2592177 AAATTTATATAAAAA TGCTTATTTCA CCCT CAAAATAAGCA TTTAAAACTTAACTT TERM 3483 2592431 - 2592406 - R 78 -6.3 -5.01546 | opp_overlap 2592406 AAATTTATATAAAAA TGCTTATTTCA CCCT CAAAATAAGCA TTTAAAACTTAACTT TERM 3484 2592637 - 2592662 + r 72 -7.8 -3.61536 | opp_overlap 2592637 AAATTTATATAAAAA TGCTTATTTT ACCCTC AAAATAAGCA TTTAAAACTTAACTT TERM 3485 2592662 - 2592637 - R 91 -8.5 -5.01546 | opp_overlap 2592637 AAATTTATATAAAAA TGCTTATTTTA CCCT CAAAATAAGCA TTTAAAACTTAACTT TERM 3486 2592868 - 2592893 + r 72 -7.8 -3.61536 | opp_overlap 2592868 AAATTTATATAAAAA TGCTTATTTT ACCCTC AAAATAAGCA TTTAAAACTTAACTT TERM 3487 2592893 - 2592868 - R 91 -8.5 -5.01546 | opp_overlap 2592868 AAATTTATATAAAAA TGCTTATTTTA CCCT CAAAATAAGCA TTTAAAACTTAACTT CPE2257 2593575 - 2593111 - | hypothetical protein CPE2258 2593699 - 2594022 + | hypothetical protein TERM 3488 2594020 - 2594053 + T 100 -9.8 -6.0427 | opp_overlap 2594020 2594025 AATATAGAGGAAAAA TAAAAGCCATGTGA AATTAC TCACATAGCTTTTA TTTTTTTTATATCAT TERM 3489 2594053 - 2594020 - T 100 -12.7 -4.87037 | opp_overlap 2594020, overlap 2594025 AATATAGAGGAAAAA TAAAAGCCATGTGAA ATTA CTCACATAGCTTTTA TTTTTTTTATATCAT TERM 3490 2594048 - 2594025 - T 100 -8.2 -5.32396 | opp_overlap 2594020, overlap 2594020 AGAGGAAAAATAAAA GCCATGTGAA ATTA CTCACATAGC TTTTATTTTTTTTAT ligA 2596057 - 2594060 - | NAD-dependent DNA ligase LigA TERM 3491 2595886 - 2595864 - G 79 -10.6 -3.03203 | TCAGGAAGAATTACA TCACCAACTC TTT GAGTAGGTGA ATAGGGTAATTTATA TERM 3492 2596130 - 2596110 - R 72 -7.7 -3.54424 | opp_overlap 2596110 CTCTAGTGGTGCAAA GCTAAACAT TAA ATGTTTAAC TCCTTGACTATCAAA CPE2260 2598341 - 2596086 - | ATP-dependent DNA helicase PcrA TERM 3493 2598478 - 2598447 - R 100 -14 -5.52023 | opp_overlap 2598447 2598451 ATGATTAATAAAAAA TAAATGGCCACATT ATAA AATGTGACCATTTA TTTCAAATATAATAC TERM 3494 2598447 - 2598478 + r 95 -11.8 -3.64599 | opp_overlap 2598447, overlap 2598451 ATGATTAATAAAAAA TAAATGGCCACATT ATAA AATGTGACCATTTA TTTCAAATATAATAC TERM 3495 2598451 - 2598474 + r 82 -8.2 -4.45117 | opp_overlap 2598447, overlap 2598447 TTAATAAAAAATAAA TGGCCACATT ATAA AATGTGACCA TTTATTTCAAATATA CPE2261 2599341 - 2598553 - | hypothetical protein CPE2262 2599906 - 2599358 - | hypothetical protein CPE2263 2600579 - 2599908 - | hypothetical protein TERM 3496 2600867 - 2600842 - R 100 -9.9 -5.69473 | opp_overlap 2600842 2600845 CATAGTATAAAAAAA GAATTGATACT TTAA AGTATCAACTC TTCATATAAACTGAA TERM 3497 2600968 - 2600945 - R 87 -6 -5.63517 | gap 1, opp_overlap 2600949 2600951, overlap 2600911 2600910 TTTGCAAATAAAAAA CGCAACCCTTG GGG CTAGG-TTGCG TCTCAGCAATAAGCA CPE2264 2601851 - 2601132 - | 16S pseudouridylate synthase CPE2265 2604285 - 2602225 - | two component regulator three Y motif protein TERM 3498 2604536 - 2604512 - R 100 -11.6 -3.90684 | opp_overlap 2604512 2604516, overlap 2604516 AATCAAACCATTAAA GAAATCTCAG CCACT CTGAGATTTC TTTTTAATGTCATTT TERM 3499 2604512 - 2604536 + r 100 -11.6 -4.85177 | opp_overlap 2604512 2604516, overlap 2604516 AATCAAACCATTAAA GAAATCTCAG CCACT CTGAGATTTC TTTTTAATGTCATTT TERM 3500 2604516 - 2604532 + r 80 -6.6 -4.94262 | opp_overlap 2604512 2604516, overlap 2604512 AAACCATTAAAGAAA TCTCAG CCACT CTGAGA TTTCTTTTTAATGTC TERM 3501 2604532 - 2604516 - R 75 -6.6 -4.54253 | opp_overlap 2604516 2604512, overlap 2604512 AAACCATTAAAGAAA TCTCAG CCACT CTGAGA TTTCTTTTTAATGTC CPE2266 2605107 - 2604658 - | hypothetical protein TERM 3502 2605265 - 2605284 + r 80 -6.4 -4.98857 | opp_overlap 2605265, overlap 2605268 TCTTAAAACAAAAAA GAAGCTCT AAAA AGAGCTCC TTTTTATAATTAAAT TERM 3503 2605284 - 2605265 - R 100 -8.6 -5.79595 | opp_overlap 2605265 2605268 TCTTAAAACAAAAAA GAAGCTCT AAAA AGAGCTCC TTTTTATAATTAAAT pgi 2606657 - 2605305 - | glucose-6-phosphate isomerase CPE2268 2606896 - 2606687 - | hypothetical protein appF 2608066 - 2607098 - | oligopeptide ABC transporter appD 2609044 - 2608067 - | oligopeptide ABC transporter appC 2609972 - 2609058 - | oligopeptide ABC transporter appB 2610952 - 2609987 - | oligopeptide ABC transporter TERM 3504 2610972 - 2611013 + r 86 -7.6 -4.75954 | gap 1, opp_overlap 2610979, overlap 2610979 CTGTTCCCCCCATTT TTCA-AAATTAGCCTGGAT TTTTT GTCCAGGCTAATTTCTTAA TTTATTTTAAATTTT TERM 3505 2610979 - 2611005 + r 100 -11.7 -4.46742 | opp_overlap 2610979, overlap 2610972 CCCCATTTTTCAAAA TTAGCCTGGAT TTTTT GTCCAGGCTAA TTTCTTAATTTATTT TERM 3506 2611005 - 2610979 - R 100 -11 -4.09685 | opp_overlap 2610972 2610979 CCCCATTTTTCAAAA TTAGCCTGGA TTTTTTG TCCAGGCTAA TTTCTTAATTTATTT appA 2612766 - 2611027 - | oligopeptide ABC transporter TERM 3507 2612847 - 2612835 - H 77 -4.9 -5.36441 | opp_overlap 2612838, overlap 2612838 GCCCCATATAAAAAA TATTG TTA CAATA ACATACATTTAATGT narK 2613396 - 2614688 + | nitrate extrusion protein TERM 3508 2614710 - 2614733 + T 100 -12.6 -6.09196 | opp_overlap 2614710 TATATAAAAGAAAAA GTAGCTATGA AATT TCATAGCTAC TTTTTTTATTTTAAA TERM 3509 2614733 - 2614710 - T 100 -12.6 -5.58522 | opp_overlap 2614710 TATATAAAAGAAAAA GTAGCTATGA AATT TCATAGCTAC TTTTTTTATTTTAAA TERM 3510 2614910 - 2614871 - T 100 -12.5 -3.8512 | overlap 2614877 TATTGATTATAACAA GATAAATAGACAATCAT ATTAAA ATGACTGCCTATTTATC CGTAATAAAAATTTA TERM 3511 2615033 - 2615007 - T 93 -9.6 -4.40894 | opp_overlap 2615004 2615007 TAAATTATATTAAAA TTCAGATAGG ATTAATA CCTATCTGAA TCAATTATTTATATT TERM 3512 2615007 - 2615033 + T 75 -9.6 -2.75473 | opp_overlap 2615007, overlap 2615004 TAAATTATATTAAAA TTCAGATAGG ATTAATA CCTATCTGAA TCAATTATTTATATT guaA 2616576 - 2615047 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3513 2616670 - 2616620 - R 70 -7.2 -3.82117 | opp_overlap 2616620 2616621 2616622, overlap 2616622 2616632 TTTATGTATAAAATA TATTCAACAAAATGTTAAAACTTA ATA TATATTTTAACATTTTGCTGAAGC TTTTAATCTAATTAT TERM 3514 2616668 - 2616622 - R 100 -14.2 -3.49186 | opp_overlap 2616621 2616620 2616622, overlap 2616620 2616632 TATGTATAAAATATA TTCAACAAAATGTTAAAACTTA ATA TATATTTTAACATTTTGCTGAA GCTTTTAATCTAATT TERM 3515 2616622 - 2616668 + r 78 -9.8 -2.52986 | opp_overlap 2616622 2616620 2616632, overlap 2616621 2616620 TATGTATAAAATATA TTCAACAAAATGTTAAAACTTA ATA TATATTTTAACATTTTGCTGAA GCTTTTAATCTAATT CPE2276 2618136 - 2616682 - | inositol-5-monophosphate dehydrogenase TERM 3516 2618309 - 2618279 - R 100 -7.7 -5.42259 | opp_overlap 2618279 TTATTTTCAAAAAAA GCATAATAACTCC CAAGT GAAGTTAATATGC TTATAGTACACCTAT CPE2277 2621467 - 2618846 - | hypothetical protein CPE2278 2622051 - 2621491 - | hypothetical protein CPE2279 2624185 - 2622077 - | hypothetical protein TERM 3517 2622238 - 2622254 + g 71 -2.3 -5.42198 | overlap 2622240 TTAAATATTCTTCAT CATAAGT TAT ACTTATA TTTTGTTTTTTAGCC CPE2280 2625191 - 2624190 - | hypothetical protein CPE2281 2626429 - 2625212 - | hypothetical protein TERM 3518 2625638 - 2625653 + g 71 -4.8 -4.80656 | ATCATTCTTAACCTT TGAATT TTCT AATTCA TTTTCTATTGTTCCT CPE2282 2626985 - 2626419 - | hypothetical protein CPE2283 2628154 - 2627000 - | type IV pilus assembly protein PilM TERM 3519 2628210 - 2628187 - R 95 -10.4 -4.16943 | opp_overlap 2628187 CTTTATAGTTGAAAA GTGCAAGGAA AAAA TTCCTTACAC TTTTTTCATTATAAT TERM 3520 2628187 - 2628210 + r 100 -8.2 -5.33848 | opp_overlap 2628187 CTTTATAGTTGAAAA GTGCAAGGAA AAAA TTCCTTACAC TTTTTTCATTATAAT CPE2284 2628818 - 2628270 - | hypothetical protein CPE2285 2630095 - 2628890 - | type II secretion system protein F CPE2286 2631813 - 2630122 - | secretion system protein E TERM 3521 2630430 - 2630450 + g 87 -8.4 -4.83615 | GTGTAGCTTCATATG TTTGTCCA CAATT TGGACAAA TTTTTCTAACAAGTC CPE2287 2632626 - 2631883 - | prepilin peptidase TERM 3522 2631937 - 2631925 - G 70 -3.5 -5.0133 | TATGTTTCCAAAAAA TATTA AAA TAATA GTAGATATTCCTATA CPE2288 2633324 - 2632902 - | prepilin peptidase dependent protein A TERM 3523 2633347 - 2633375 + r 75 -7 -4.27467 | opp_overlap 2633353 CCTCCTTTTATATTT TTTAAAGTTAAA TATTT TTTAACTTTAGA TTTATATTAGTATTA TERM 3524 2633444 - 2633424 - R 100 -11.3 -5.65177 | opp_overlap 2633424 ATATGCACAAAAAAA GAGATTCTT TAA AAGAATCTC TTTTAATATATCATT TERM 3525 2633424 - 2633444 + r 100 -11.3 -4.4084 | opp_overlap 2633424 ATATGCACAAAAAAA GAGATTCTT TAA AAGAATCTC TTTTAATATATCATT TERM 3526 2633950 - 2633981 + r 86 -8.9 -4.46587 | opp_overlap 2633956, overlap 2633956 AATAAGAATTAAATA AAAAAAGGATGAC TTAACT GTCATCCTTTTTA TTCTTTTATTAGTAC TERM 3527 2633975 - 2633956 - R 100 -7.9 -6.01187 | opp_overlap 2633950 2633956 AATTAAATAAAAAAA GGATGAC TTAACT GTCATCC TTTTTATTCTTTTAT TERM 3528 2633956 - 2633975 + r 100 -7.9 -5.47964 | opp_overlap 2633956, overlap 2633950 AATTAAATAAAAAAA GGATGAC TTAACT GTCATCC TTTTTATTCTTTTAT groEL 2635609 - 2633990 - | chaperonin GroEL groES 2635948 - 2635664 - | co-chaperonin GroES TERM 3529 2635986 - 2636012 + H 75 -7.5 -3.84271 | gap 1, opp_overlap 2635969 CTAATTAATTTTTGT TTAGCACTC-AT TAAT ATAGAGTGCTAA TTCTTACTATTATCA TERM 3530 2636711 - 2636721 + G 76 -5.4 -5.13648 | AGCTTTTAATATTTT CTTC TAT GAAG TTTTATTTATATTTC CPE2291 2636319 - 2636969 + | hypothetical protein TERM 3531 2637343 - 2637329 - g 73 -3.6 -5.2112 | AAGATGATGAAAAAA TTAAGC GTT ACTTAA AATTCATAAAAAAGC CPE2292 2637112 - 2637423 + | hypothetical protein CPE2293 2638483 - 2637545 - | 8-oxoguanine DNA glycosylase CPE2294 2638897 - 2638493 - | hypothetical protein TERM 3532 2639132 - 2639099 - R 87 -4 -6.23317 | ATAAAAAGAAAAAAA CACGGATAGGTG-TTC TTTC GAATCACCC-TCCATG TTATTAAGCTAAGCC lepW 2639641 - 2639141 - | signal peptidase type I TERM 3533 2639772 - 2639725 - R 91 -8.1 -4.9725 | overlap 2639731 ATTCCTATATAAAAA TAAAAACTGTACTAAAAGCAA ATAAAA TTACTCTTAATACAGTTTTAA TTAAACTAAATTATA TERM 3534 2639766 - 2639731 - R 93 -7.1 -5.71295 | overlap 2639725 ATATAAAAATAAAAA CTGTACTAAAAGCAA ATAAAA TTACTCTTAATACAG TTTTAATTAAACTAA CPE2296 2641483 - 2639783 - | ABC transporter TERM 3535 2641608 - 2641638 + r 71 -7 -3.95148 | opp_overlap 2641612, overlap 2641612 CTTTTTATAAAAGAA AAAAGAGATTGATA AAA TATCAATCTCTTAC TTTACTTCAATCTCT TERM 3536 2641612 - 2641634 + r 95 -12.2 -3.6187 | opp_overlap 2641612, overlap 2641608 TTATAAAAGAAAAAA GAGATTGATA AAA TATCAATCTC TTACTTTACTTCAAT TERM 3537 2641634 - 2641612 - R 100 -12.2 -5.86976 | opp_overlap 2641612 2641608 TTATAAAAGAAAAAA GAGATTGATA AAA TATCAATCTC TTACTTTACTTCAAT CPE2297 2642590 - 2641742 - | 3-hydroxybutyryl-CoA dehydrogenase fixB 2643711 - 2642704 - | 3-hydroxybutyryl-CoA dehydrogenase etfB 2644512 - 2643733 - | electron transfer flavoprotein beta subunit bcd 2645670 - 2644531 - | butyryl-CoA dehydrogenase crt 2646499 - 2645717 - | 3-hydroxybutyryl-CoA dehydratase TERM 3538 2646665 - 2646639 - R 100 -14 -5.58209 | opp_overlap 2646637 2646642 GCAAAGGCAAAAAAA TAATTGAAGTAC TCG GTACTTCAATTA AATTATAAAACTTAA TERM 3539 2646642 - 2646662 + r 90 -11.3 -3.23452 | opp_overlap 2646639, overlap 2646637 AAGGCAAAAAAATAA TTGAAGTAC TCG GTACTTCAA TTAAATTATAAAACT CPE2302 2647400 - 2646762 - | redox-sensing transcriptional repressor Rex CPE2303 2650088 - 2647890 - | heavy metal-transporting ATPase CPE2304 2650463 - 2650104 - | transcriptional regulator TERM 3540 2650491 - 2650512 + r 74 -8.1 -3.4724 | overlap 2650487 TATTATTCATTTTTA CATATGAGC ATCT GTTCATATG TTCACTTTTATTATA TERM 3541 2650589 - 2650560 - R 73 -2.1 -5.64006 | ATGCAACTAAAAAAA GACCGCACCAAAA ATTT TATTGATACAGCC TTTTTTCATTATTTA CPE2305 2651218 - 2650598 - | hypothetical protein CPE2306 2651884 - 2651306 - | hypothetical protein TERM 3542 2651624 - 2651610 - G 72 -2.8 -5.47431 | GGAATACAGAAAAAA TCACAT ATA AAGTGA CATATAACTCCTAAC TERM 3543 2652232 - 2652260 + r 100 -13.3 -3.32963 | opp_overlap 2652232 CCTAAAATTAAAAAA GCTAGGAATGAAA AAC TTCCATTCCTAGC TTATAAAATACAAAT TERM 3544 2652260 - 2652232 - R 100 -15.5 -5.46698 | opp_overlap 2652232 CCTAAAATTAAAAAA GCTAGGAATGAAA AAC TTCCATTCCTAGC TTATAAAATACAAAT CPE2307 2652840 - 2652430 - | hypothetical protein TERM 3545 2653045 - 2653009 - R 100 -16.9 -4.97312 | opp_overlap 2653009 AAAAGTAACTAAAAA GTCCTATATCATACACC TAA AGTATATGATATAGGAC TTTTTTTACATAAGT TERM 3546 2653009 - 2653045 + r 100 -14 -5.47821 | opp_overlap 2653009 AAAAGTAACTAAAAA GTCCTATATCATACAC CTAAA GTATATGATATAGGAC TTTTTTTACATAAGT CPE2308 2654139 - 2653069 - | mannose-1-phosphate guanylyltransferase CPE2309 2655756 - 2654377 - | beta-glucosidase TERM 3547 2655879 - 2655899 + r 80 -6.9 -5.00616 | opp_overlap 2655879, overlap 2655881 ATTTCAAGAAAAAAA GATCTAAGT ATA ACTTAGACC TTTTTTCGCAAACCA TERM 3548 2655899 - 2655879 - R 100 -9.1 -5.80364 | opp_overlap 2655879 2655881 ATTTCAAGAAAAAAA GATCTAAGT ATA ACTTAGACC TTTTTTCGCAAACCA aldH 2657829 - 2656453 - | aldehyde dehydrogenase TERM 3549 2657929 - 2657970 + r 75 -8.9 -3.28205 | opp_overlap 2657929, overlap 2657927 2657921 ATTTAATCATAAAAA GCGTGTATCAAAATTTAAT AATA AATATACTTTGATACACGC TCTTAATATTAATTT TERM 3550 2657970 - 2657929 - R 100 -11.1 -4.98857 | opp_overlap 2657929 2657927 2657921 ATTTAATCATAAAAA GCGTGTATCAAAATTTAAT AATA AATATACTTTGATACACGC TCTTAATATTAATTT CPE2311 2658689 - 2657979 - | hypothetical protein TERM 3551 2659726 - 2659697 - g 81 -3.8 -5.60864 | gap 1 TATATATGAAAAAAA GATAATGACCTTT ATCGA AAAAG-CATTATC TTTGTATAAGTAAAT CPE2312 2658798 - 2659739 + | hypothetical protein TERM 3552 2659993 - 2660011 + T 85 -8.2 -4.67608 | overlap 2659987 2659986 CAATTAAATTGAGGC CTCTTCAG TCT TTGAAGAG TTTTCTGTTAACCTG CPE2313 2660886 - 2659981 - | hypothetical protein TERM 3553 2660728 - 2660740 + g 75 -4.9 -5.14965 | CTCATTTTTATTTGA TACTA TAA TAGTA TTTTTTGCTGAAGCT TERM 3554 2660750 - 2660766 + g 74 -2.2 -5.52807 | overlap 2660747 ATAGTATTTTTTGCT GAAGCT TTTTT AGCTAC TTTTTGTTTATTATT CPE2314 2661921 - 2660908 - | hypothetical protein TERM 3555 2661984 - 2661958 - R 70 -3.8 -5.26918 | ATATTTTATAAAAAA TAAGACTAAG GCAAAAA CCCAGTCTTA TTCCACTAACTTTCC CPE2315 2662659 - 2661982 - | sortase family protein TERM 3556 2662985 - 2662973 - H 72 -4.9 -5.00267 | AACCATAAAAATAAA TTTTC ATT GAAAA AATAAATCTAAGAGG ispF 2663009 - 2663479 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CPE2317 2664968 - 2663655 - | Na+/H+ antiporter TERM 3557 2664694 - 2664680 - G 70 -8.6 -2.64803 | TTAGCCCTAAATTTA CTGTAG ATT CTACAG CTCCCATATTTTTAG TERM 3558 2665045 - 2665026 - R 100 -7.2 -6.14618 | opp_overlap 2665026 TACAAAATAAAAAAA CTCCTATC CTAG GATAGAAG TTATTATTCTTACAG CPE2318 2666147 - 2665305 - | pyridoxamine kinase TERM 3559 2666281 - 2666261 - R 100 -10.5 -6.34616 | opp_overlap 2666261, overlap 2666276 2666277 GTAAAATAAAAAAAA GCATCGCTT ATA AAACGATGC TTGGTGCACCATCAG TERM 3560 2666261 - 2666281 + r 72 -8.3 -3.14931 | opp_overlap 2666261 2666276 2666277 GTAAAATAAAAAAAA GCATCGCTT ATA AAACGATGC TTGGTGCACCATCAG TERM 3561 2666435 - 2666451 + r 75 -8.7 -3.25192 | overlap 2666432 ATCGAACCCGGGTAT CCAGCTT GGA AGGCTGG TGTTCTACCATTGAA TERM 3562 2666652 - 2666666 + r 70 -7.8 -3.322 | opp_overlap 2666635 CGAACCCCTGACCCA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT CPE2319 2667512 - 2666820 - | hypothetical protein CPE2320 2667702 - 2668106 + | hypothetical protein TERM 3563 2668142 - 2668110 - T 79 -8.5 -4.128 | opp_overlap 2668110 AGTTGTATATAGAAA GCTGTATCAAAGCTA CTT CAGTTTTGATGCAGC TTTATTTTTATCAAT TERM 3564 2668110 - 2668142 + T 100 -12.2 -4.97405 | opp_overlap 2668110 AGTTGTATATAGAAA GCTGTATCAAAGCT ACTTC AGTTTTGATGCAGC TTTATTTTTATCAAT CPE2321 2669574 - 2668165 - | hypothetical protein TERM 3565 2669825 - 2669803 - H 89 -4.3 -6.09888 | gap 1 TTTTAATAAAAAAAA GACTTCAATA AAAT TA-TGAAGTC TTCCAAAAAAATCTC TERM 3566 2669854 - 2669874 + H 95 -12.7 -3.14931 | opp_overlap 2669854 2669869 TCTAAAAACAAAAAA GCATCGATT ATA AATCGATGC TTGGTGCACCATCAG TERM 3567 2669874 - 2669854 - H 100 -12.7 -5.93252 | opp_overlap 2669854, overlap 2669869 TCTAAAAACAAAAAA GCATCGATT ATA AATCGATGC TTGGTGCACCATCAG TERM 3568 2670003 - 2670019 + H 75 -8.7 -3.25192 | overlap 2670000 ATCGAACCCGGGTAT CCAGCTT GGA AGGCTGG TGTTCTACCATTGAA TERM 3569 2670174 - 2670190 + H 75 -8.7 -3.25192 | overlap 2670171 ATCGAACCCGGGTAT CCAGCTT GGA AGGCTGG TGTTCTACCATTGAA TERM 3570 2670785 - 2670748 - H 100 -14.3 -3.10245 | opp_overlap 2670748 CCACGGGAATATACA CTCTCGTCCCTTTTCTA TATT TAGAAGAGGGATGAGAG TTTTTATTTTATATG TERM 3571 2670748 - 2670785 + H 100 -18.7 -5.58522 | opp_overlap 2670748 CCACGGGAATATACA CTCTCGTCCCTTTTCTA TATT TAGAAGAGGGATGAGAG TTTTTATTTTATATG thrS 2670843 - 2672774 + | threonyl-tRNA synthetase TERM 3572 2673026 - 2673008 - T 70 -7.6 -3.47383 | overlap 2673006 ATTATATTAATAACA TTTTGATT TAT AATCAAAA AAGAACTTGGAAGTA TERM 3573 2673075 - 2673029 - T 70 -3.3 -5.32944 | overlap 2673032 TTTATAATCAAAAAA GAACTTGGAAGTATTCC-TATAA AAT CCATAAGGAAT-CCTCCAAGTTT TTTATTTTAAAGAAA TERM 3574 2673072 - 2673032 - T 70 -5 -4.73828 | overlap 2673029 ATAATCAAAAAAGAA CTTGGAAGTATTCC-TATAA AAT CCATAAGGAAT-CCTCCAAG TTTTTTATTTTAAAG CPE2323 2674935 - 2673241 - | oligoendopeptidase, M3 family CPE2324 2675609 - 2675031 - | 5-formyltetrahydrofolate cyclo-ligase family protein TERM 3575 2675501 - 2675515 + g 76 -2.8 -5.54403 | opp_overlap 2675503, overlap 2675503 TATTCTTATATATAT CACTTT CCA AAAGAG TTTTTCTTATTTTTT CPE2325 2676647 - 2675835 - | hypothetical protein TERM 3576 2676818 - 2676760 - R 86 -8.7 -4.47707 | opp_overlap 2676781 2676787 TTTCACTAAAAATAA GGAGTGTTTAAAATCACTT-TATAGCATT TTA AATACTATTTAAATGAT-TTAAACACCCC TAACACATATAAATA CPE2326 2677031 - 2676861 - | hypothetical protein glmS 2678883 - 2677051 - | D-fructose-6-phosphate amidotransferase CPE2328 2679676 - 2680200 + | hypothetical protein TERM 3577 2680249 - 2680298 + T 93 -9.2 -4.60073 | gap 2, opp_overlap 2680249, overlap 2680292 TTTAAATCATAAAAA GCTATAAATAACATGAATAGTTTT AAAT AAAATTAT-CATG-TATTTATAGC TTTTATAATTCTATG TERM 3578 2680298 - 2680249 - T 83 -7 -5.04325 | gap 2, opp_overlap 2680249 2680292 TTTAAATCATAAAAA GCTATAAATAACATGAATAGTTTT AAAT AAAATTAT-CATGT-ATTTATAGC TTTTATAATTCTATG CPE2329 2681696 - 2680350 - | phosphoglucosamine mutase CPE2330 2682169 - 2683461 + | hypothetical protein TERM 3579 2683477 - 2683509 + T 78 -6.6 -4.73635 | opp_overlap 2683479 2683481 AAATATAGGTTATTA TATAGAAAAATATA TTTTT TATATTATTCTATA TTTTATTAACTTATA TERM 3580 2683534 - 2683590 + T 100 -14.9 -5.15634 | opp_overlap 2683527 2683536, overlap 2683536 CTTATAAATATTTAA AATACCCCTTAAGTAGATTTAAGAA AACCACC TTTTAAAATCTACTTAAGGGGTATA TTTTTTACTAAACTA TERM 3581 2683536 - 2683588 + T 100 -17.5 -4.20707 | opp_overlap 2683527 2683536, overlap 2683534 TATAAATATTTAAAA TACCCCTTAAGTAGATTTAAGAA AACCACC TTTTAAAATCTACTTAAGGGGTA TATTTTTTACTAAAC TERM 3582 2683588 - 2683536 - T 100 -16.7 -4.33907 | opp_overlap 2683536 2683534, overlap 2683527 TATAAATATTTAAAA TACCCCTTAAGTAGATTTAAGAAAA CCA CCTTTTAAAATCTACTTAAGGGGTA TATTTTTTACTAAAC CPE2331 2685125 - 2683722 - | two-component sensor histidine kinase TERM 3583 2684965 - 2685008 + g 75 -4.2 -5.252 | gap 1, overlap 2684958 2684980 AGCTCCATCAAAATG TTTTGT-ACTGTATTCTGATT TTT AATCATAATATAGTCACCAAA TTTTTTATCAAAATA CPE2332 2685798 - 2685106 - | two-component response regulator TERM 3584 2685951 - 2685905 - R 75 -5.4 -4.93079 | opp_overlap 2685909 2685916 2685917 2685920 2685949, overlap 2685897 2685906 2685909 2685917 AATAAAATAAATAAA TTTATTTAAAAAGAAGACTAAA TCA TATAGTCTTCCTTCTAAATTAG TAAAATCAATATTTT TERM 3585 2685950 - 2685906 - R 79 -8.9 -3.52187 | opp_overlap 2685909 2685916 2685917 2685920 2685949, overlap 2685897 2685905 2685909 2685917 ATAAAATAAATAAAT TTATTTAAAAAGAAGACTAAA TCA TATAGTCTTCCTTCTAAATTA GTAAAATCAATATTT TERM 3586 2685947 - 2685909 - R 82 -10.6 -2.85287 | opp_overlap 2685909 2685916 2685917 2685920, overlap 2685897 2685906 2685905 2685917 AAATAAATAAATTTA TTTAAAAAGAAGACTAAA TCA TATAGTCTTCCTTCTAAA TTAGTAAAATCAATA TERM 3587 2685939 - 2685917 - R 83 -7.8 -4.69027 | opp_overlap 2685916 2685909 2685917 2685920, overlap 2685909 2685906 2685905 AAATTTATTTAAAAA GAAGACTAAA TCA TATAGTCTTC CTTCTAAATTAGTAA CPE2333 2686285 - 2685968 - | hypothetical protein CPE2334 2686650 - 2686351 - | TrpR-like protein YerC/YecD CPE2335 2687629 - 2686790 - | hypothetical protein TERM 3588 2687738 - 2687711 - R 100 -9.3 -5.85011 | CAAAAATTAAAAAAA GCTAGAGATCA TTAAAT TAATCTCTAGC AAAACATTTATATAA gde 2689764 - 2687746 - | glycogen debranching protein TERM 3589 2688022 - 2688010 - G 83 -7.7 -4.59853 | overlap 2688012 GTAAGCTGTGAAAAA TCCTC CAA GAGGA AATGCCCATGTTGTT TERM 3590 2688136 - 2688169 + g 72 -2.7 -5.38839 | gap 1, opp_overlap 2688142, overlap 2688142 TAATCCATAAGGAGT GTATAATTCTTCAAAA ACC TTTTGAACAAT-ATGC TTTTCTTTTTCTCTA TERM 3591 2689277 - 2689291 + g 77 -5.8 -4.91084 | overlap 2689280 TTTTTATCCACAGTT TTTGAA AAT TTCAAA TTTTCTTCTTCACTA TERM 3592 2689925 - 2689941 + r 78 -8.1 -4.01078 | CATAAATTCCTATCA TCCAAAT ATA ATTTGGA TTTATACTAAGTTTT TERM 3593 2690018 - 2690070 + r 70 -4.6 -4.91987 | gap 1, opp_overlap 2690018 ATATATAACATAAAA CTTACAAACAATATGAAGAAAAT ATCTAGCA ATTTTCTGAATAT-GTTTGTAAG TTTTATTATTACGTT glgP 2692470 - 2690107 - | glycogen phosphorylase TERM 3594 2690819 - 2690830 + g 72 -4.4 -5.16132 | GTTACCTTTGGTATA TCCA TATC TGGA TTTTCTTTTAATCTA TERM 3595 2691148 - 2691160 + g 72 -4.1 -5.04377 | TCTTAACCATCTTCT TGGAG TTA TTCCA TTTGTTTTGTTTTGG malQ 2693956 - 2692463 - | 4-alpha-glucanotransferase CPE2339 2696125 - 2693978 - | alpha-glucosidase malR 2697162 - 2696149 - | LacI family transcriptional regulator TERM 3596 2697371 - 2697345 - R 86 -12.4 -2.54523 | opp_overlap 2697338 2697337 2697333 CTATATTTTAATGGA TTGTGGAAGGTA ATT TTCCTTCCACAA AATCCATAAGTATAT CPE2341 2698350 - 2697457 - | maltose ABC transporter TERM 3597 2697771 - 2697755 - G 88 -9.5 -4.17089 | GTGAAAGTTTGAAAA GTTGATG CTC CATCAAC ATAAGCTGCCTCTGT CPE2342 2699305 - 2698352 - | maltose ABC transporter TERM 3598 2699375 - 2699357 - R 73 -7.4 -4.07535 | overlap 2699358 AACTTCTATAAATAA GGGGGA ATTTACA TCCCCC TATAAAAACTTCTTA CPE2343 2700618 - 2699392 - | maltose ABC transporter TERM 3599 2701041 - 2701004 - R 78 -4.3 -5.56263 | opp_overlap 2700999 2701004 ATCATAAAATAAAAA CCATATCAAAGTTAA TTTAATCC TTTCCTTTGATATGG TTTTCTACTATCATA CPE2344 2702020 - 2701079 - | hypothetical protein CPE2345 2703164 - 2702055 - | maltose ABC transportor TERM 3600 2703368 - 2703344 - R 81 -7.2 -4.78848 | opp_overlap 2703342 2703344 TTTTTAAATATAAAA GACAGGATAC ATTAA ACATCCTGTC TATATTTTAAATATT hydA 2705100 - 2703382 - | iron hydrogenase TERM 3601 2705110 - 2705120 + r 81 -5.4 -5.30155 | ATTCATGCTGTTCCT CCAA TTT TTGG TTTTTTACTTAATAC TERM 3602 2705288 - 2705256 - R 100 -10.2 -5.07652 | gap 1, opp_overlap 2705265 TTTTTTAAAACAAAA TTTAAGGG-AGAATT ACAA AATTCTTCCCTTAAA CAATCTAAACTATTC buk 2706396 - 2705326 - | butyrate kinase ptb 2707410 - 2706421 - | phosphate butyryltransferase TERM 3603 2707446 - 2707481 + r 72 -7.8 -3.48069 | opp_overlap 2707450, overlap 2707445 2707450 2707480 ACTATATTCTACCAA AAAATATTCTGAAAAC ATTA GTTTTCAGAATATTCA ATTTATTATTTTTTA TERM 3604 2707450 - 2707477 + r 95 -13 -3.42458 | opp_overlap 2707450, overlap 2707446 2707445 TATTCTACCAAAAAA TATTCTGAAAAC ATTA GTTTTCAGAATA TTCAATTTATTATTT TERM 3605 2707477 - 2707450 - R 100 -13 -5.15634 | opp_overlap 2707450 2707446 2707445 TATTCTACCAAAAAA TATTCTGAAAAC ATTA GTTTTCAGAATA TTCAATTTATTATTT CPE2349 2709113 - 2707512 - | hypothetical protein TERM 3606 2709146 - 2709187 + r 77 -6.9 -4.69324 | gap 1, opp_overlap 2709145 2709148, overlap 2709149 ATTTCTTTAGTAAAT TATTTTACCACAGAATAC GCTTAAA GTAATCTGTGGT-AAATA TTTATTGTTTATTAT TERM 3607 2709149 - 2709185 + r 100 -11.1 -3.92799 | opp_overlap 2709148 2709145, overlap 2709146 TCTTTAGTAAATTAT TTTACCACAGAATAC GCTTAAA GTAATCTGTGGTAAA TATTTATTGTTTATT CPE2350 2710517 - 2709189 - | hypothetical protein CPE2351 2711341 - 2710484 - | hypothetical protein TERM 3608 2711991 - 2712003 + G 76 -2.7 -5.60689 | AAAGAGGGAAATAAT TATCT ACA GGATA TTTTTTATTATATAA TERM 3609 2712063 - 2712048 - g 79 -7.6 -4.21945 | ACTAATAGAGATAAA GGCTTT GTCC AAAGCC AAAAGAATGATTTTG CPE2352 2711502 - 2712464 + | hypothetical protein TERM 3610 2712952 - 2712927 - g 81 -6.2 -5.1383 | opp_overlap 2712921, overlap 2712917 2712914 AATAACACAGAAAAA TGCCTTTTCT TGTGTT AGAAATGGCA AAATTGACGTAGTAC CPE2353 2712535 - 2713137 + | spore cortex-lytic enzyme TERM 3611 2713137 - 2713171 + T 100 -12.4 -4.31293 | opp_overlap 2713145, overlap 2713145 TTTTAATGTTACCTA AAGAAAAAGCTAACAC AAT GTGTTAGCTTTTTTTA TTTCTTACTGTCTAA TERM 3612 2713163 - 2713145 - T 100 -11.8 -5.30616 | opp_overlap 2713145 2713137 TTACCTAAAGAAAAA GCTAACAC AAT GTGTTAGC TTTTTTTATTTCTTA TERM 3613 2713145 - 2713163 + T 100 -11.8 -6.08342 | opp_overlap 2713145, overlap 2713137 TTACCTAAAGAAAAA GCTAACAC AAT GTGTTAGC TTTTTTTATTTCTTA trxR 2714029 - 2713169 - | thioredoxin reductase CPE2355 2714370 - 2714056 - | thioredoxin TERM 3614 2714388 - 2714404 + r 77 -6.5 -4.57581 | opp_overlap 2714391, overlap 2714389 TATACGCCTCCCGAT ATACCCC TAA GGGGTAC TTTATTATTTACAAT TERM 3615 2714389 - 2714403 + r 87 -10 -3.33464 | opp_overlap 2714391, overlap 2714388 ATACGCCTCCCGATA TACCCC TAA GGGGTA CTTTATTATTTACAA CPE2356 2715656 - 2714487 - | isoaspartyl dipeptidase TERM 3616 2715773 - 2715754 - R 100 -12.2 -5.93809 | opp_overlap 2715772 2715772 TTTTTATAAAAAAAA GGCACGAA TTAA TTCGTGCC AAAACTTAGGGTTTT CPE2357 2717440 - 2715821 - | phosphoenolpyruvate-protein phosphotransferase TERM 3617 2717701 - 2717749 + H 70 -3.6 -5.27023 | opp_overlap 2717701, overlap 2717703 2717732 TTTTATTATACTAAA TGTGATAAAAAATATCAA ACTAATTTTACCA TTGATATTTTTTATCAAA TTTTCTTTTTAAAAT TERM 3618 2718776 - 2718765 - g 78 -3 -5.65927 | TATTTAAAGAAAAAA CTTT ATTA AAAG ATGTAATTCATAAGA TERM 3619 2719154 - 2719135 - g 76 -3.6 -5.49569 | opp_overlap 2719139, overlap 2719139 TAGTAATAGAAAAAA TAAGCCTT TTGT AAGGGTTA ACTGTGCTTCAATTC CPE2358 2717915 - 2719921 + | sigma-L-dependent transcriptional regulator TERM 3620 2719976 - 2719922 - T 100 -12 -4.8236 | gap 1, opp_overlap 2719935, overlap 2719935 GATGTAAAAAAATAA TA-AAATAAAAAAACACTTGGAGAC CAGCAC ATCTCCAAGTGTTTTTTTATTAGTA AGAGTTTAGTAACAT TERM 3621 2719962 - 2719935 - T 100 -10.7 -6.17669 | opp_overlap 2719935, overlap 2719922 AATAAAATAAAAAAA CACTTGGAGAC CAGCAC ATCTCCAAGTG TTTTTTTATTAGTAA TERM 3622 2719935 - 2719962 + T 100 -10 -5.84381 | opp_overlap 2719935 2719922 AATAAAATAAAAAAA CACTTGGAGA CCAGCACA TCTCCAAGTG TTTTTTTATTAGTAA rpsD 2720684 - 2720091 - | 30S ribosomal protein S4 nrdF 2722119 - 2721085 - | ribonucleotide-diphosphate reductase subunit beta TERM 3623 2722197 - 2722159 - R 90 -10.7 -3.35679 | gap 1, opp_overlap 2722158 2722165, overlap 2722163 2722165 TTTCTCTATCTATAA TTAATAGATACTCACCTA AGCC TAGATGAGTATCT-TTAA AATTCTTAATTTATA TERM 3624 2722194 - 2722163 - R 82 -9.6 -3.45945 | opp_overlap 2722158 2722165, overlap 2722159 2722165 TCTATCTATAATTAA TAGATACTCACCTA AGCC TAGATGAGTATCTT TAAAATTCTTAATTT TERM 3625 2722165 - 2722192 + r 90 -10 -3.72453 | opp_overlap 2722163 2722159 2722165, overlap 2722158 TATCTATAATTAATA GATACTCACCTA AGCC TAGATGAGTATC TTTAAAATTCTTAAT TERM 3626 2722192 - 2722165 - R 95 -12.2 -3.30039 | opp_overlap 2722165 2722158, overlap 2722163 2722159 TATCTATAATTAATA GATACTCACCTA AGCC TAGATGAGTATC TTTAAAATTCTTAAT nrdA 2724446 - 2722215 - | ribonucleotide-diphosphate reductase subunit alpha TERM 3627 2723674 - 2723686 + g 76 -9.1 -3.17901 | AAACCTCTTATGGCT GAGCC TAA GGCTC TTACCTTACCCATAT TERM 3628 2724690 - 2724732 + r 100 -12.4 -4.4267 | opp_overlap 2724699, overlap 2724699 CTTTTAAGTAGGCAT AAATAAAAAGACTACAGA TATTTAC TCTGTAGTCTTTTTATTA TTTTAAATTTTCAGC TERM 3629 2724723 - 2724699 - R 100 -8.7 -5.38958 | opp_overlap 2724690 2724699 AGGCATAAATAAAAA GACTACAGA TATTTAC TCTGTAGTC TTTTTATTATTTTAA TERM 3630 2724699 - 2724723 + r 100 -8.7 -5.4593 | opp_overlap 2724699, overlap 2724690 AGGCATAAATAAAAA GACTACAGA TATTTAC TCTGTAGTC TTTTTATTATTTTAA CPE2362 2725086 - 2724730 - | ArsC family protein CPE2363 2727084 - 2725258 - | two-component sensor histidine kinase TERM 3631 2726536 - 2726557 + g 71 -4.5 -4.78326 | opp_overlap 2726536, overlap 2726527 TCTTGAGAAATATAT TTCTTCATA ATTA TCTGAAGAA TTTATTTCTTTAAAG CPE2364 2727760 - 2727062 - | DNA-binding response regulator TERM 3632 2728510 - 2728524 + G 70 -4.3 -4.88918 | TAAATATGTGTATCG TTGCT GTAGG AGCAA TTTTCTTTGGACTAG TERM 3633 2728687 - 2728701 + G 70 -6.4 -4.18018 | overlap 2728697 TAGAAGATCTTCATA GAGGAG TAA CTTCTC TTTTAGCTGAAGGAG CPE2365 2728014 - 2728871 + | hypothetical protein TERM 3634 2728903 - 2728883 - f 93 -9.7 -4.69048 | opp_overlap 2728883, overlap 2728874 ATAAAAGCAAATAAA GCTATGCTC ATA GGGCATAGC TTTTTTAATGTCATA TERM 3635 2728883 - 2728903 + F 100 -11.9 -5.23316 | opp_overlap 2728883 2728874 ATAAAAGCAAATAAA GCTATGCTC ATA GGGCATAGC TTTTTTAATGTCATA CPE2366 2728973 - 2729125 + | hypothetical protein CPE2367 2729803 - 2729132 - | N-acetylmuramoyl-L-alanine amidase TERM 3636 2729983 - 2729962 - R 100 -10.3 -5.85244 | opp_overlap 2729962 2729965 2729977 AAGTAAAAGAAAAAA GAATACCTA ATGT TAGGTATTC TTTAATATCTTTAAT TERM 3637 2729962 - 2729983 + r 95 -10.3 -3.97911 | opp_overlap 2729962, overlap 2729965 2729977 AAGTAAAAGAAAAAA GAATACCTA ATGT TAGGTATTC TTTAATATCTTTAAT CPE2368 2731607 - 2729994 - | hypothetical protein TERM 3638 2730881 - 2730895 + g 80 -6.4 -4.93877 | TTAAATGTATGGCAG CAGCTT TGT GAGCTG TTTTGTTTGCTCCAA TERM 3639 2731974 - 2731955 - R 100 -12.2 -5.82281 | opp_overlap 2731955 2731958 AAATATATAAAAAAA GAAGGAGG TATT CCTCCTTC TTTCTGATAAAAGCA TERM 3640 2731955 - 2731974 + r 100 -12.2 -3.96148 | opp_overlap 2731955, overlap 2731958 AAATATATAAAAAAA GAAGGAGG TATT CCTCCTTC TTTCTGATAAAAGCA TERM 3641 2731958 - 2731971 + r 79 -8.1 -4.11183 | opp_overlap 2731955, overlap 2731955 TATATAAAAAAAGAA GGAGG TATT CCTCC TTCTTTCTGATAAAA rpsI 2732387 - 2731995 - | 30S ribosomal protein S9 rplM 2732848 - 2732414 - | 50S ribosomal protein L13 TERM 3642 2732702 - 2732726 + g 83 -8.7 -4.15114 | opp_overlap 2732707 AACGAAATCTCCACA GTCAACATTTG GTG TAAATGTTGGC TTGTTCTTTCCTCTT truA 2733729 - 2732995 - | tRNA pseudouridine synthase A TERM 3643 2733029 - 2733048 + g 80 -2.1 -5.71712 | overlap 2733031 AAGCATAATCCTGTT GGTGGAA CACAAA TTCCAGC TTTTTTTCTATCACC TERM 3644 2733822 - 2733797 - R 100 -11.3 -4.42464 | opp_overlap 2733797 2733801, overlap 2733784 2733801 AATTCTTCAAACAAA GAAAGACTACA AATT TGCAGTCTTTC TTTTATATTATCAAT TERM 3645 2733797 - 2733822 + r 93 -9.1 -4.74285 | opp_overlap 2733784 2733797 2733801, overlap 2733801 AATTCTTCAAACAAA GAAAGACTACA AATT TGCAGTCTTTC TTTTATATTATCAAT TERM 3646 2733818 - 2733801 - R 76 -6.3 -4.78326 | opp_overlap 2733797 2733801, overlap 2733797 CTTCAAACAAAGAAA GACTACA AATT TGCAGTC TTTCTTTTATATTAT CPE2372 2734693 - 2733887 - | hypothetical protein CPE2373 2735566 - 2734709 - | cobalt transporter ATP-binding subunit CPE2374 2736396 - 2735551 - | cobalt transporter ATP-binding subunit TERM 3647 2736550 - 2736501 - R 88 -4.7 -5.96219 | opp_overlap 2736508 2736516 2736532 TATGTATAAAAAAAA TACCTACTTATAAAATAATACTA TTAA TAATTTTATTTTGTAAATAGATA TTTCCTTATTTTAAC TERM 3648 2736804 - 2736779 - R 100 -13.5 -4.50976 | opp_overlap 2736781 TTTTATATGACAAAA GAGGATTAAGT AAAA ACTTAATCCTC TCTAAAGAAATATAT TERM 3649 2736781 - 2736802 + r 82 -10.3 -2.87683 | opp_overlap 2736779 TTATATGACAAAAGA GGATTAAGT AAAA ACTTAATCC TCTCTAAAGAAATAT rplQ 2737160 - 2736819 - | 50S ribosomal protein L17 rpoA 2738124 - 2737177 - | DNA-directed RNA polymerase subunit alpha rpsD 2738829 - 2738209 - | 30S ribosomal protein S4 rpsK 2739248 - 2738853 - | 30S ribosomal protein S11 rpsM 2739630 - 2739265 - | 30S ribosomal protein S13 rpmJ 2739980 - 2739867 - | ribosomal protein L36 infA 2740211 - 2739993 - | translation initiation factor IF-1 CPE2382 2740527 - 2740219 - | hypothetical protein map 2741335 - 2740586 - | methionine aminopeptidase, type I adk 2741991 - 2741335 - | adenylate kinase secY 2743289 - 2742012 - | preprotein translocase subunit SecY TERM 3650 2742117 - 2742141 + g 77 -8.7 -3.57462 | opp_overlap 2742117 TGATGTTCCTCCAAA CTGTATTCCTT GGA AAGGAGTATAG TTTGCAACTAAAATA TERM 3651 2742178 - 2742164 - G 72 -8.6 -2.89607 | overlap 2742161 CTAAAATAGGAACTA CTGCTA TAA TAGCAG CAAAACATCCACCAA TERM 3652 2743142 - 2743117 - G 70 -6.3 -4.16182 | gap 1, opp_overlap 2743117 2743121 2743125, overlap 2743122 CCACCAGAAATTAAA TCATAGAAGCTT ACT AAGCTTCC-TGA TTGTGTTAAAGCTTT TERM 3653 2743138 - 2743122 - G 76 -9.5 -3.09188 | opp_overlap 2743121 2743117 2743125, overlap 2743117 AGAAATTAAATCATA GAAGCTT ACT AAGCTTC CTGATTGTGTTAAAG rplO 2743732 - 2743292 - | 50S ribosomal protein L15 rpmD 2743939 - 2743766 - | 50S ribosomal protein L30 rpsE 2744448 - 2743951 - | 30S ribosomal protein S5 rplR 2744828 - 2744469 - | 50S ribosomal protein L18 rplF 2745398 - 2744859 - | 50S ribosomal protein L6 TERM 3654 2745314 - 2745352 + g 70 -8.3 -3.14132 | ACTCACCCTTAGGGC CTTTTACTGTAACAACG TTCTC TGGTGTTACAGTAACAG TTACTCCAGCAGGGA rpsH 2745893 - 2745495 - | 30S ribosomal protein S8 rpsN 2746112 - 2745927 - | 30S ribosomal protein S14 rplE 2746668 - 2746129 - | 50S ribosomal protein L5 rplX 2747005 - 2746691 - | 50S ribosomal protein L24 rplN 2747397 - 2747029 - | 50S ribosomal protein L14 rpsQ 2747682 - 2747428 - | 30S ribosomal protein S17 rpmC 2747913 - 2747704 - | ribosomal protein L29 rplP 2748347 - 2747913 - | 50S ribosomal protein L16 TERM 3655 2747944 - 2747975 + g 71 -6.7 -4.03234 | ATTTCCTCAAAATCT CTTCTTGTAACGA ACTTAG TCTTTACAGGAAG TTTGTGTGAAGCAAG rpsC 2749046 - 2748378 - | 30S ribosomal protein S3 rplV 2749402 - 2749067 - | 50S ribosomal protein L22 rpsS 2749711 - 2749430 - | 30S ribosomal protein S19 rplB 2750615 - 2749782 - | 50S ribosomal protein L2 rplW 2750963 - 2750670 - | 50S ribosomal protein L23 rplD 2751578 - 2751051 - | 50S ribosomal protein L4 rplC 2752232 - 2751603 - | 50S ribosomal protein L3 TERM 3656 2752103 - 2752114 + g 72 -4.4 -5.09259 | TTGCGTCATATCCAT CAGT TTCA ACTG TTTTCTTTTGAACTA rpsJ 2752623 - 2752315 - | 30S ribosomal protein S10 TERM 3657 2753094 - 2753064 - R 100 -15 -5.61689 | opp_overlap 2753064 2753069 AAAATCAACAAAAAA TAAAAGAGAGGATA ATA TATCCCCTCTTTTA TATTAAAGGCCTATT TERM 3658 2753064 - 2753094 + r 93 -12.8 -3.03007 | opp_overlap 2753064, overlap 2753069 AAAATCAACAAAAAA TAAAAGAGAGGATA ATA TATCCCCTCTTTTA TATTAAAGGCCTATT TERM 3659 2753069 - 2753089 + r 85 -8.3 -4.66537 | opp_overlap 2753064, overlap 2753064 CAACAAAAAATAAAA GAGAGGATA ATA TATCCCCTC TTTTATATTAAAGGC TERM 3660 2753166 - 2753198 + r 81 -7.4 -4.79174 | gap 1, opp_overlap 2753166 2753164, overlap 2753169 TTTAGATTTTAAAGA GTCTTCTAATATATA CGTC TATATATTAGAA-AC TTTTCTTAGTTAACT TERM 3661 2753169 - 2753196 + r 79 -10.2 -2.67129 | opp_overlap 2753166 2753164, overlap 2753166 AGATTTTAAAGAGTC TTCTAATATATA CGTC TATATATTAGAA ACTTTTCTTAGTTAA tuf 2754511 - 2753318 - | elongation factor Tu TERM 3662 2754549 - 2754591 + r 83 -3.6 -5.81412 | opp_overlap 2754541 2754557 2754562 2754565, overlap 2754553 2754556 2754557 AAAATATTATATACA TTTATATATTAAAGAAGCTT TTA AAGCTTCTTTAAATTATTTA TTTTTTTTACCTGCA TERM 3663 2754553 - 2754587 + r 100 -8.8 -5.33985 | opp_overlap 2754541 2754557 2754562 2754565, overlap 2754549 2754556 2754557 TATTATATACATTTA TATATTAAAGAAGCTT TTA AAGCTTCTTTAAATTA TTTATTTTTTTTACC TERM 3664 2754556 - 2754584 + r 100 -10.5 -4.68355 | opp_overlap 2754557 2754562 2754565, overlap 2754553 2754549 2754557 TATATACATTTATAT ATTAAAGAAGCTT TTA AAGCTTCTTTAAA TTATTTATTTTTTTT TERM 3665 2754557 - 2754583 + r 100 -14 -3.35523 | opp_overlap 2754557 2754562 2754565, overlap 2754556 2754553 2754549 ATATACATTTATATA TTAAAGAAGCTT TTA AAGCTTCTTTAA ATTATTTATTTTTTT TERM 3666 2754583 - 2754557 - R 100 -14 -2.94622 | opp_overlap 2754557 2754556 2754553 2754549, overlap 2754562 2754565 ATATACATTTATATA TTAAAGAAGCTT TTA AAGCTTCTTTAA ATTATTTATTTTTTT TERM 3667 2754578 - 2754562 - R 86 -9.5 -3.89212 | opp_overlap 2754557 2754556 2754553 2754549, overlap 2754557 2754565 CATTTATATATTAAA GAAGCTT TTA AAGCTTC TTTAAATTATTTATT fus 2756651 - 2754585 - | elongation factor G TERM 3668 2755909 - 2755928 + g 70 -5 -4.56133 | opp_overlap 2755912 ATTTCATTGTTTATA GTAGCTTT TCTT AAAGCAAC TTTTAATTCTTCAAG TERM 3669 2756609 - 2756624 + g 71 -4.7 -4.83615 | CTATATGTGCCATTA TTCCG AAGTTA CGGAA TTTTTCTAACGGATA TERM 3670 2756692 - 2756726 + r 100 -11.6 -4.77079 | opp_overlap 2756692 2756697, overlap 2756697 TGTTTTTAAATTCAA CAAAACTGTTTTGGCT TTT AGCCAAAACAGTTTCA TTTTATTAATATCTG TERM 3671 2756726 - 2756692 - R 100 -16 -3.27525 | opp_overlap 2756692 2756697, overlap 2756697 TGTTTTTAAATTCAA CAAAACTGTTTTGGCT TTT AGCCAAAACAGTTTCA TTTTATTAATATCTG TERM 3672 2756697 - 2756721 + r 100 -15.9 -4.33854 | opp_overlap 2756692 2756697, overlap 2756692 TTAAATTCAACAAAA CTGTTTTGGCT TTT AGCCAAAACAG TTTCATTTTATTAAT TERM 3673 2756721 - 2756697 - R 100 -15.9 -4.75309 | opp_overlap 2756697 2756692, overlap 2756692 TTAAATTCAACAAAA CTGTTTTGGCT TTT AGCCAAAACAG TTTCATTTTATTAAT rpsG 2757202 - 2756732 - | 30S ribosomal protein S7 rpsL 2757742 - 2757362 - | 30S ribosomal protein S12 CPE2411 2758066 - 2757800 - | ribosomal protein L7AE family protein TERM 3674 2757863 - 2757877 + g 85 -7.2 -4.94058 | CTCCCCTAGAATTTT CATGTT TTT AACATG TTTTATTTCAATTCC rpoC 2761688 - 2758152 - | DNA-directed RNA polymerase subunit beta' TERM 3675 2760680 - 2760696 + g 70 -5.1 -4.56961 | opp_overlap 2760680, overlap 2760692 TTCCTGAATAGTCAA CCCTCTT ACC AAGAAGG TTTTGTCTGAATCTT TERM 3676 2761756 - 2761731 - R 81 -10.5 -2.73542 | opp_overlap 2761728 GTGAATTTTTAAGTA TCCCCTTACTC TCAT GAGCAAGGGAA CACTTTATATCCTAG rpoB 2765472 - 2761768 - | DNA-directed RNA polymerase subunit beta TERM 3677 2762062 - 2762080 + g 77 -7.4 -4.24002 | overlap 2762065 CTTAAATGATTCTGG CACTCCTG GTT CAGGAATG TTTTCACCTTTAACA TERM 3678 2762725 - 2762743 + g 82 -7.5 -4.74285 | AAGTTCATTAACTCC TGGTGAT AAATC ATCACCA TTTTCTCTTGTAAAT TERM 3679 2764883 - 2764905 + g 72 -4.3 -5.12916 | gap 1 CCAAAGCCCATAGCT CTTCCTAGTA TACT TA-TAGGAAG TTTTCTTGTTTTATC TERM 3680 2765375 - 2765395 + g 74 -7.7 -3.71649 | opp_overlap 2765375 2765376, overlap 2765376 AACCATTTGTAAGAA TCTAATTGA ATT TCAATTAGG TTTGGCATTTCAGCC TERM 3681 2765376 - 2765394 + g 71 -9 -2.82668 | opp_overlap 2765375 2765376, overlap 2765375 ACCATTTGTAAGAAT CTAATTGA ATT TCAATTAG GTTTGGCATTTCAGC TERM 3682 2765394 - 2765376 - G 71 -9 -2.78073 | opp_overlap 2765376 2765375, overlap 2765375 ACCATTTGTAAGAAT CTAATTGA ATT TCAATTAG GTTTGGCATTTCAGC TERM 3683 2765693 - 2765683 - R 70 -2.6 -5.46629 | opp_overlap 2765683 AATATTCTAAAAAAA TTTA CTT TAAA TTATTTTTTACGCCC TERM 3684 2765730 - 2765749 + r 77 -6.4 -4.55826 | opp_overlap 2765730, overlap 2765725 TTGAGTTAAAAAAAA GAGGCACT ACTA AGTACCTC TTTTAATATTTTAAA TERM 3685 2765749 - 2765730 - R 100 -8.6 -5.81412 | opp_overlap 2765730 2765725 TTGAGTTAAAAAAAA GAGGCACT ACTA AGTACCTC TTTTAATATTTTAAA rplL 2766142 - 2765777 - | ribosomal protein L7/L12 rplJ 2766697 - 2766197 - | 50S ribosomal protein L10 TERM 3686 2766393 - 2766414 + g 78 -9.5 -3.35679 | overlap 2766413 TCAAGCTTTTTGTTT TCCTTAGCG AAAT CGTTAAGGA TTCTAGCTGGAGCAG TERM 3687 2766770 - 2766747 - R 78 -6 -4.97957 | opp_overlap 2766747 2766745, overlap 2766768 TATATAATAAGAAAA GTCTTCCCGT AGAC ATAGGAAGAC TATTATATACACTAT rplA 2767603 - 2766914 - | 50S ribosomal protein L1 TERM 3688 2767292 - 2767302 + g 75 -4 -5.33785 | ATAATCAAACCAGTT TTCA CCT TGAA TTTTTTGTACTAATT rplK 2768086 - 2767661 - | 50S ribosomal protein L11 nusG 2768682 - 2768161 - | transcription antitermination protein NusG secE 2768944 - 2768720 - | preprotein translocase subunit SecE rpmG 2769147 - 2768998 - | 50S ribosomal protein L33 TERM 3689 2769271 - 2769294 + r 86 -9.6 -3.84674 | opp_overlap 2769271 CGTTGGCTATGTAAA GGACTAGGTT ATTT AACCCAGTCC TTATTATGATAAACT TERM 3690 2769294 - 2769271 - R 95 -11.8 -3.64703 | opp_overlap 2769271 CGTTGGCTATGTAAA GGACTAGGTT ATTT AACCCAGTCC TTATTATGATAAACT tuf 2770523 - 2769330 - | elongation factor Tu sigH 2771395 - 2770748 - | RNA polymerase factor sigma-70 CPE2423 2771986 - 2771477 - | hypothetical protein TERM 3691 2771660 - 2771694 + g 100 -11.7 -4.2649 | opp_overlap 2771659 2771658 2771656 TCTTTGGAAAATAGT TTGTTGTTCTAACCT ATCCG AGGTTACAACAACAA TTTCTACTTTTCTTC CPE2424 2772871 - 2772002 - | RNA methyltransferase, TrmH family, group 3 TERM 3692 2772079 - 2772093 + g 77 -7.2 -4.21676 | TTAAAGAATTTATTT TTCCAA CCA TTGGAA TTTTAACTAACTTGT TERM 3693 2772860 - 2772870 + g 74 -5.4 -4.86822 | TTTATATTTATTTTC TGAC TTT GTCA TTTTGTTCTCTCCTT thyX 2773631 - 2772894 - | FAD-dependent thymidylate synthase CPE2426 2774057 - 2773647 - | hypothetical protein TERM 3694 2774246 - 2774271 + r 86 -9.1 -4.40601 | opp_overlap 2774246 TCTTTAAAATAATAA CTTGCAAAAGA AAGT TCCTTTGCAAG TTTATTATCTAAATT TERM 3695 2774271 - 2774246 - R 100 -11.3 -4.20868 | opp_overlap 2774246 TCTTTAAAATAATAA CTTGCAAAAGA AAGT TCCTTTGCAAG TTTATTATCTAAATT cysS 2775685 - 2774285 - | cysteinyl-tRNA synthetase proS 2777502 - 2775790 - | prolyl-tRNA synthetase TERM 3696 2777603 - 2777574 - R 100 -8.7 -6.32976 | gap 1, opp_overlap 2777574 AAAAAAATAAAAAAA GCTCTACCCTAAAA AAA CTTTAGGGC-GAGC TTATATTTCGCGGTA ispD 2778534 - 2777857 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPE2430 2779654 - 2778548 - | PIN/TRAM domain protein TERM 3697 2779380 - 2779366 - G 71 -8.6 -2.79248 | overlap 2779363 2779368 CTAAAGCTAATACTA GAGCTA CTA TAGCTC CCCCCGCTCCAAATA CPE2431 2779966 - 2780367 + | hypothetical protein TERM 3698 2780372 - 2780397 + T 100 -9.1 -4.98758 | opp_overlap 2780371 2780369 2780375, overlap 2780375 CTTTTAGATAAATAT TAAGTGCCATA TTTA TATGGCACTTC TTTTTATAAATTTTT TERM 3699 2780394 - 2780375 - T 91 -10.8 -3.52522 | opp_overlap 2780372 2780375, overlap 2780371 2780369 TTAGATAAATATTAA GTGCCATA TTTA TATGGCAC TTCTTTTTATAAATT TERM 3700 2780375 - 2780394 + T 100 -10.8 -4.55383 | opp_overlap 2780375 2780371 2780369, overlap 2780372 TTAGATAAATATTAA GTGCCATA TTTA TATGGCAC TTCTTTTTATAAATT CPE2432 2781465 - 2780401 - | DNA integrity scanning protein DisA TERM 3701 2781099 - 2781110 + g 75 -4.4 -5.20222 | TTCTTCTTTGTGATA TAGC TATT GCTA TTTTATTTGTTTGCT TERM 3702 2781421 - 2781431 + g 81 -2.6 -5.82316 | AGTACCTGGACTCAT TATT TTT AATA TTTTTTTTAACTCAT radA 2782846 - 2781485 - | DNA repair protein RadA TERM 3703 2783016 - 2783066 + r 71 -7.1 -3.97645 | opp_overlap 2783018, overlap 2783018 2783034 AAAATAAAAATAAAA AACTGTTTGTAAATTTAAGCATT TAAAT AATGCTTTTATCTACAAACAGTC TTCTTATATATTAAT TERM 3704 2783064 - 2783018 - R 100 -11.9 -6.01725 | opp_overlap 2783016 2783018 2783034 AATAAAAATAAAAAA CTGTTTGTAAATTTAAGCATT TAAAT AATGCTTTTATCTACAAACAG TCTTCTTATATATTA TERM 3705 2783018 - 2783064 + r 83 -9.7 -3.56668 | opp_overlap 2783018, overlap 2783016 2783034 AATAAAAATAAAAAA CTGTTTGTAAATTTAAGCATT TAAAT AATGCTTTTATCTACAAACAG TCTTCTTATATATTA nagB 2783825 - 2783097 - | glucosamine-6-phosphate deaminase TERM 3706 2783727 - 2783745 + g 75 -4.6 -5.02777 | opp_overlap 2783727 TCCACCAGTAGCTAA TCCTAAAA CAA TTTCAGGA TTTCTTTTTATATCT CPE2435 2784544 - 2783822 - | GntR family transcriptional regulator CPE2436 2784744 - 2784908 + | hypothetical protein CPE2437 2785002 - 2785229 + | glutaredoxin TERM 3707 2785266 - 2785241 - T 78 -7.7 -4.23529 | opp_overlap 2785241, overlap 2785245 ATAGGAACATAGAAA TAGAGAGATGT TTTT ACATCTCTTTA TTTTTTTGCAATAAA TERM 3708 2785241 - 2785266 + T 100 -9.9 -5.44119 | opp_overlap 2785241 2785245 ATAGGAACATAGAAA TAGAGAGATGT TTTT ACATCTCTTTA TTTTTTTGCAATAAA TERM 3709 2785262 - 2785245 - T 74 -8.5 -3.42088 | opp_overlap 2785241, overlap 2785241 GAACATAGAAATAGA GAGATGT TTTT ACATCTC TTTATTTTTTTGCAA TERM 3710 2785310 - 2785285 - T 100 -10.6 -5.4505 | opp_overlap 2785285 TTTTGCAATAAAAAA GCTACAAGTA GAAATT TACTTGTAGC TTTTTAGGTATAGGT TERM 3711 2785285 - 2785310 + T 100 -11.3 -4.71061 | opp_overlap 2785285 TTTTGCAATAAAAAA GCTACAAGTAG AAAT TTACTTGTAGC TTTTTAGGTATAGGT gapN 2786800 - 2785352 - | NADP-dependent glyceraldehyde-3-phosphate dehydrogenas TERM 3712 2786613 - 2786623 + g 72 -4 -5.1286 | opp_overlap 2786607, overlap 2786607 TCATTTAAAGGAACT TCAT TCC ATGA TTTTTGTGCTTTTTC CPE2439 2787050 - 2786817 - | glutaredoxin CPE2440 2787991 - 2787053 - | thioredoxin-disulfide reductase TERM 3713 2788060 - 2788070 + r 82 -5.4 -5.57396 | overlap 2788051 2788050 TTCGATGTACCCCCT TAGG GTA CCTA TTTTTTATTAATTAT TERM 3714 2788254 - 2788221 - R 100 -10.6 -6.01369 | opp_overlap 2788221 TAAATAATAAAAAAA TAAGGTCATATATG TTTTAT CATATATAACCTTA TTTATTCTTAAAATC TERM 3715 2788221 - 2788254 + r 82 -8.4 -4.45738 | opp_overlap 2788221 TAAATAATAAAAAAA TAAGGTCATATATG TTTTAT CATATATAACCTTA TTTATTCTTAAAATC clpC 2790712 - 2788268 - | negative regulator of genetic competence MecB/ClpC CPE2442 2791750 - 2790737 - | ATP:guanido phosphotransferase CPE2443 2792333 - 2791734 - | hypothetical protein ctsR 2792736 - 2792281 - | transcriptional repressor TERM 3716 2792899 - 2792932 + H 86 -7.9 -4.83169 | gap 1, opp_overlap 2792924 TCTTATATTTTATGT TTATTTATATTATATG TGT CA-ATAATATAAATAA TTTTTATAGGAGGCT CPE2445 2792953 - 2793606 + | hypothetical protein TERM 3717 2793609 - 2793649 + T 77 -5 -5.33405 | gap 1, opp_overlap 2793609 2793604 AGATATGATATAAAA GACTATATGCAAACTCC ATTACTTA GGAATTTG-ATATAGTC TTTTTCTTTAGTGAA TERM 3718 2793649 - 2793609 - T 79 -7.2 -4.60143 | gap 1, opp_overlap 2793609, overlap 2793604 AGATATGATATAAAA GACTATATGCAAACTCC ATTACTTA GGAATTTG-ATATAGTC TTTTTCTTTAGTGAA CPE2446 2795318 - 2793657 - | hypothetical protein TERM 3719 2795419 - 2795405 - R 100 -10 -6.09196 | TTTAAAATAAAAAAA GCAGCT TAA AGCTGC AAAAAAAAGATCATC TERM 3720 2795445 - 2795428 - R 100 -8.5 -5.77853 | opp_overlap 2795428 AAGCTGCAAAAAAAA GATCATC CGAA GATGATC TTTAATAATATTATT TERM 3721 2795428 - 2795445 + r 78 -8.5 -3.86322 | opp_overlap 2795428 AAGCTGCAAAAAAAA GATCATC CGAA GATGATC TTTAATAATATTATT fer 2795626 - 2795456 - | ferredoxin CPE2448 2796700 - 2795795 - | PSP1 domain protein holB 2797626 - 2796703 - | DNA polymerase III subunit delta' CPE2450 2797977 - 2797648 - | hypothetical protein CPE2451 2798289 - 2798134 - | hypothetical protein gmk 2798896 - 2798306 - | guanylate kinase-like protein CPE2453 2800573 - 2799143 - | Orn/Lys/Arg decarboxylase csfB 2800767 - 2800591 - | putative csfB protein TERM 3722 2801440 - 2801418 - g 100 -12.2 -2.95448 | opp_overlap 2801413 2801409, overlap 2801408 2801413 TCAAAGGCAATTATA CCTTTAAAAG TAA CTTTTAAAGG TCATGATGGATTAAG CPE2455 2800923 - 2802092 + | amidohydrolase-like protein TERM 3723 2802127 - 2802085 - T 86 -12.5 -2.54166 | gap 1, opp_overlap 2802093 2802098, overlap 2802087 2802098 TGTCTAAGGAAAATT TATATTAAAAAAAGAGAGTC AAAA GACTCTCTTTTCTTAA-ATA GCTAAGTTTTTTTCT TERM 3724 2802127 - 2802087 - T 88 -11.6 -2.80479 | gap 1, opp_overlap 2802093 2802098, overlap 2802085 2802098 TCTAAGGAAAATTTA TA-TTAAAAAAAGAGAGTC AAAA GACTCTCTTTTCTTAAATA GCTAAGTTTTTTTCT TERM 3725 2802093 - 2802120 + T 82 -10 -3.08312 | opp_overlap 2802085 2802087 2802098, overlap 2802098 GAAAATTTATATTAA AAAAAGAGAGTC AAAA GACTCTCTTTTC TTAAATAGCTAAGTT TERM 3726 2802115 - 2802098 - T 100 -9.9 -5.58454 | opp_overlap 2802093 2802098, overlap 2802085 2802087 TTTATATTAAAAAAA GAGAGTC AAAA GACTCTC TTTTCTTAAATAGCT TERM 3727 2802098 - 2802115 + T 100 -9.9 -4.68384 | opp_overlap 2802098 2802085 2802087, overlap 2802093 TTTATATTAAAAAAA GAGAGTC AAAA GACTCTC TTTTCTTAAATAGCT CPE2456 2802618 - 2802121 - | hypothetical protein CPE2457 2802893 - 2803837 + | transport protein TERM 3728 2803889 - 2803911 + F 83 -6.3 -5.41746 | opp_overlap 2803889, overlap 2803891 TTAACTAAAAGATTA TTGAGAGCA ATTTA TGCTCTCTA TTTTTTTAGGAGGTT TERM 3729 2803891 - 2803909 + F 84 -8.9 -4.34482 | opp_overlap 2803889, overlap 2803889 AACTAAAAGATTATT GAGAGCA ATTTA TGCTCTC TATTTTTTTAGGAGG CPE2458 2803902 - 2804810 + | hypothetical protein TERM 3730 2805045 - 2805030 - T 79 -4 -5.77856 | opp_overlap 2805030, overlap 2805022 2805017 AATAAACTAAAAAAA GACATA TTAA CATGTC TCTTTTAATGTTTAA TERM 3731 2805065 - 2805097 + T 75 -7.9 -3.8613 | opp_overlap 2805069, overlap 2805069 TTAATGTTTAATGAA AAAAGTGGATTTATA AAA TATAAATCCACTTAA TTCTTAGTGTTTGGA TERM 3732 2805069 - 2805093 + T 100 -13.1 -3.57816 | opp_overlap 2805069, overlap 2805065 TGTTTAATGAAAAAA GTGGATTTATA AAA TATAAATCCAC TTAATTCTTAGTGTT TERM 3733 2805093 - 2805069 - T 100 -13.1 -5.26875 | opp_overlap 2805069 2805065 TGTTTAATGAAAAAA GTGGATTTATA AAA TATAAATCCAC TTAATTCTTAGTGTT TERM 3734 2805155 - 2805174 + T 100 -10.8 -5.24129 | opp_overlap 2805155 TCTGCAAAGCAAAAA CCTCAGTA AAGT TACTGAGG TTTTTTATGGAGGCG TERM 3735 2805174 - 2805155 - T 100 -10.8 -4.98531 | opp_overlap 2805155 TCTGCAAAGCAAAAA CCTCAGTA AAGT TACTGAGG TTTTTTATGGAGGCG TERM 3736 2806324 - 2806287 - T 89 -9.5 -4.2528 | gap 1, opp_overlap 2806314, overlap 2806299 2806314 TTTTAATTCAATAAA TTCTGTGGATAATTTTTA AAA TAAAAAT-ATCCACAGGA AAATCTAATTTTAAA TERM 3737 2806361 - 2806314 - T 100 -9.6 -5.45802 | gap 1, opp_overlap 2806314, overlap 2806287 2806299 TTTTTAAAATAAAAA TATCCACAGGAAA-ATCTAATTT TAA AAATTAAACCTTTCATGTGGATA TTATAAAAATTACAA TERM 3738 2806386 - 2806405 + T 89 -9.4 -4.21607 | opp_overlap 2806386 TTACAAAATAAAAAA GCTTGAAT TAAA ATTCAAGC TTTATCTTACCTAGC TERM 3739 2806405 - 2806386 - T 100 -9.4 -5.86976 | opp_overlap 2806386 TTACAAAATAAAAAA GCTTGAAT TAAA ATTCAAGC TTTATCTTACCTAGC TERM 3740 2806461 - 2806484 + T 71 -8.2 -3.04144 | CCCGTGCAGTACCAT CGACCGTTAA AGGC TTAACCGTCG TGTTCGGAATGGGAA TERM 3741 2808337 - 2808353 + T 82 -8.7 -4.13014 | CAGCGGACGAACCTT CCTGAGG AAA CCTTAGG TTTTCGGCCTGTGGG TERM 3742 2808922 - 2808932 + T 71 -6.8 -4.15453 | opp_overlap 2808911 GCAACGTGGTTCGGT CCTC CAC GAGG TTTTACCCTCGCTTC TERM 3743 2809158 - 2809169 + T 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 3744 2809232 - 2809247 + T 81 -10.4 -2.71011 | GTAGTATTTAGCCTT GGGAGG TGGT CCTCCC TGCTTCCCACAAGGT TERM 3745 2809398 - 2809415 + T 90 -9.9 -3.695 | GTTATGTCCTCAACC CCGGAAA CAAG TTTCCGG TTTGGGCTCTTTCCC TERM 3746 2809541 - 2809556 + T 72 -9 -2.69489 | opp_overlap 2809541 2809543, overlap 2809538 ATTCACTTAATGATA CATGGG GTTT CCCATG TGAGTTTCCTCATTC TERM 3747 2809556 - 2809541 - T 73 -9 -2.92371 | opp_overlap 2809541 2809538, overlap 2809543 ATTCACTTAATGATA CATGGG GTTT CCCATG TGAGTTTCCTCATTC TERM 3748 2809733 - 2809743 + T 73 -6.8 -4.19887 | opp_overlap 2809725, overlap 2809725 ATAGAAATTGGTTTT GCCA ATT TGGC TTGTTGTTTCTATAT TERM 3749 2810075 - 2810095 + T 72 -8.4 -3.23853 | overlap 2810072 TCCAGAATTCATTAT CATCTTAG TTGTC CTAAGATG TATTCCTTAGAAAGG TERM 3750 2810121 - 2810140 + T 75 -9.2 -2.65808 | opp_overlap 2810112 2810109, overlap 2810118 2810118 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 3751 2811415 - 2811440 + T 72 -9.1 -2.61735 | overlap 2811414 2811422 CGGATTGCTCCTTTG GTTGAATGATG ATGC CATCTTTCAAC ATTATGCGGTATTAA TERM 3752 2811706 - 2811721 + T 72 -6.1 -4.39696 | AAAGACCATTTCTTT GTCGC CCTCAA GCGAC TTTCTTAGTTTAACA TERM 3753 2811800 - 2811820 + T 70 -6.1 -4.20368 | TTTTGTTAAGTTGTT TCTTGTCTC TTA GCGACGAGA TTTATCTTACCATCA murD 2813501 - 2812125 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 3754 2812322 - 2812336 + g 85 -3.6 -5.72053 | CTTCTTCTAATCTCT TGAAAG CTG CTTTTA TTTTTTCTTTAGTTA TERM 3755 2813228 - 2813251 + g 72 -6.8 -4.18197 | ATCTTAATAAAGCTT CACTGTCTAT TCTC ATAGATGGTG TTTTAAATACAACCT TERM 3756 2813581 - 2813601 + H 71 -7 -3.86481 | opp_overlap 2813580 2813578 2813575 2813581 2813583 TTCTAATTATAACAC TATGGAAT TTTCC ATTCCATA TTATTATAACTTATT TERM 3757 2813860 - 2813843 - g 70 -4.1 -4.88646 | opp_overlap 2813852, overlap 2813852 AAAAAGCAAAAGAAA CTCATGA ACTT TCAAGAG ATGAAATTATAGCCT bioB 2813812 - 2814855 + | biotin synthase TERM 3758 2815016 - 2815057 + T 91 -10.4 -3.49938 | opp_overlap 2815018, overlap 2815009 2815018 TTTAATTACCTAAAA AACTGTAGGGAAATTTAT TTTTAT ATAAACTTCCCTACAGTC TTATAAATTATTTAA TERM 3759 2815018 - 2815055 + T 95 -13 -3.31231 | opp_overlap 2815018, overlap 2815016 2815009 TAATTACCTAAAAAA CTGTAGGGAAATTTAT TTTTAT ATAAACTTCCCTACAG TCTTATAAATTATTT TERM 3760 2815055 - 2815018 - T 100 -15.2 -5.12617 | opp_overlap 2815018 2815016 2815009 TAATTACCTAAAAAA CTGTAGGGAAATTTAT TTTTAT ATAAACTTCCCTACAG TCTTATAAATTATTT CPE2461 2816339 - 2815098 - | putative oxidoreductase mccF 2817299 - 2816430 - | LD-carboxypeptidase family protein TERM 3761 2816486 - 2816497 + g 70 -4.4 -4.87626 | CATCTGCACCATGTC CAAG GTCT CTTG TTTTTAATATTGGAA TERM 3762 2817460 - 2817439 - R 100 -11.7 -4.79667 | opp_overlap 2817442 AAAACTTATGAAAAA GGATGAAGA AAAT TCTTCATCC TTAAAATTAAAATTA pepT 2818591 - 2817473 - | peptidase TERM 3763 2818756 - 2818726 - R 100 -10.1 -6.02919 | opp_overlap 2818726 TCATAAATAAAAAAA CTTATAAATATAT ATGGA ATATATTTATAAG TTTTTATTTTTGCTT TERM 3764 2818726 - 2818756 + r 100 -10.1 -5.67529 | opp_overlap 2818726 TCATAAATAAAAAAA CTTATAAATATAT ATGGA ATATATTTATAAG TTTTTATTTTTGCTT glyS 2820180 - 2818777 - | glycyl-tRNA synthetase TERM 3765 2819198 - 2819208 + g 72 -4 -5.10877 | opp_overlap 2819198 GATGGCTCTATAACA TATG GTA CATA TTTTTCATTTGTTGT TERM 3766 2820295 - 2820263 - R 81 -8.7 -3.86194 | opp_overlap 2820262 AACTTCCTTGAGAAA TATTTCTAACAGT TTTATTC ACTGCTAGAAATA CTCATCTAGATTAAC TERM 3767 2820609 - 2820570 - R 100 -11.2 -5.80364 | opp_overlap 2820570 ATGTCAATAAAAAAA GAATTTATAAACATACAA AAGC TTATATATTTATAAATTC TTTCTTAATTAATTT TERM 3768 2820570 - 2820609 + r 73 -6.8 -4.37247 | opp_overlap 2820570 ATGTCAATAAAAAAA GAATTTATAAACATACAA AAGC TTATATATTTATAAATTC TTTCTTAATTAATTT TERM 3769 2820826 - 2820855 + r 86 -9.5 -4.06148 | opp_overlap 2820827, overlap 2820827 2820829 CAAATAAAATAAAAA ATAGAAGTTTACT TTTT AGTAAACTTCTAC TTTATATAAACTATT TERM 3770 2820854 - 2820827 - R 100 -13 -5.95449 | opp_overlap 2820826 2820827 2820829 AAATAAAATAAAAAA TAGAAGTTTACT TTTT AGTAAACTTCTA CTTTATATAAACTAT TERM 3771 2820827 - 2820854 + r 93 -13 -3.02966 | opp_overlap 2820827, overlap 2820826 2820829 AAATAAAATAAAAAA TAGAAGTTTACT TTTT AGTAAACTTCTA CTTTATATAAACTAT TERM 3772 2820829 - 2820852 + r 87 -11.2 -3.06686 | opp_overlap 2820827, overlap 2820827 2820826 ATAAAATAAAAAATA GAAGTTTACT TTTT AGTAAACTTC TACTTTATATAAACT lysS 2822371 - 2820866 - | lysyl-tRNA synthetase TERM 3773 2821594 - 2821607 + g 70 -5.3 -4.64657 | GTCTTACTGAAACCC CTTCA TTTC TGAAG TTTTTACCCATTTCA greA 2822873 - 2822397 - | transcription elongation factor GreA CPE2467 2824132 - 2823152 - | putative dihydrouridine synthase CPE2468 2824918 - 2824139 - | pantothenate kinase TERM 3774 2824966 - 2824948 - R 82 -8.9 -4.08221 | CTTAATATAATTAAA GACAGCT AATAA AGCTGTC CGGAAAATACCATGT TERM 3775 2825102 - 2825064 - R 100 -9 -5.95539 | TTTTAAATAAAAAAA GGCTTATATGACTATTTT TTT AACAGCGTCATATAAGCC TCAAAATTATCTAAA CPE2469 2826791 - 2825121 - | formate--tetrahydrofolate ligase TERM 3776 2825398 - 2825414 + g 72 -6.6 -4.10925 | TGTTTAAGAGCTTGA GGAGTA TAGTT TACTCC TTTTCCGCCATATAT TERM 3777 2826563 - 2826577 + g 73 -8.6 -3.14487 | overlap 2826562 ACGCTTGTCCTAATC CTACTG TAA CAGTAG ATTTTCCCTCTCCTG TERM 3778 2826758 - 2826772 + g 80 -8.6 -3.75832 | TTATTGGCTCCATTT TAGCAC TTT GTGCTA TTTCAATATCATTTT TERM 3779 2826865 - 2826898 + r 70 -7.8 -3.41325 | gap 1, opp_overlap 2826871, overlap 2826871 AACAAAGAGTTTTAT CGAAC-ATTTTTATA TATTT TATAAAAATTGTTCG TATTATTAAAATATC TERM 3780 2826969 - 2826986 + r 95 -9.9 -4.24606 | opp_overlap 2826969 ATAATTATAAAAAAA GAGGTAC TTAA GTACCTC TTTTAACTATGAGTT TERM 3781 2826986 - 2826969 - R 100 -9.9 -5.73339 | opp_overlap 2826969 ATAATTATAAAAAAA GAGGTAC TTAA GTACCTC TTTTAACTATGAGTT ftsH 2828798 - 2826993 - | ATP-dependent metalloprotease FtsH hprT 2829424 - 2828873 - | hypoxanthine phosphoribosyltransferase CPE2472 2830836 - 2829427 - | tRNA(Ile)-lysidine synthetase TERM 3782 2830534 - 2830549 + g 80 -6.2 -4.91987 | CTCTTCTCTTCCAGC CATTTC TGTA GAAATG TTTTGTTCTTCACTT spoIIE 2833443 - 2831053 - | stage II sprulation protein E TERM 3783 2833744 - 2833764 + r 100 -11.3 -4.25104 | opp_overlap 2833744 AAGAAAAATAAAAAA CTCATCTTA TTT TAAGATGAG TTTTGGTGCCGAAGA TERM 3784 2833764 - 2833744 - R 100 -11.3 -6.01725 | opp_overlap 2833744 AAGAAAAATAAAAAA CTCATCTTA TTT TAAGATGAG TTTTGGTGCCGAAGA TERM 3785 2834745 - 2834709 - R 95 -10.4 -3.99216 | opp_overlap 2834716, overlap 2834710 2834716 AATATAAAAGCTAAA TTTAAAATCCCTTAGA TATGC TCCAAGGGATTTTAAG AAATATTATATTGAT TERM 3786 2834744 - 2834710 - R 100 -13.9 -2.97903 | opp_overlap 2834716, overlap 2834709 2834716 ATATAAAAGCTAAAT TTAAAATCCCTTAGA TATGC TCCAAGGGATTTTAA GAAATATTATATTGA TERM 3787 2834738 - 2834716 - R 80 -8.5 -4.37198 | opp_overlap 2834716, overlap 2834710 2834709 AAGCTAAATTTAAAA TCCCTTAGA TATGC TCCAAGGGA TTTTAAGAAATATTA CPE2474 2835155 - 2834751 - | hypothetical protein CPE2475 2835607 - 2835215 - | hypothetical protein CPE2476 2836005 - 2835631 - | hypothetical protein CPE2477 2836314 - 2836015 - | sporulation protein YabP TERM 3788 2836381 - 2836413 + r 100 -10.9 -4.77036 | opp_overlap 2836381 CTTTACACAAAAAAA TGACTAATATAATCT TTT AAATTATATTAGTCA TTTTTAATAATAAAG TERM 3789 2836413 - 2836381 - R 100 -13.1 -5.71712 | opp_overlap 2836381 CTTTACACAAAAAAA TGACTAATATAATCT TTT AAATTATATTAGTCA TTTTTAATAATAAAG CPE2478 2836705 - 2836445 - | S4 domain protein TERM 3790 2836772 - 2836753 - R 100 -10.7 -5.47431 | opp_overlap 2836753 TTAATAGATAAAAAA GCCCGAG AAATAA CTCGGGC TTTTTTAAAGTTAAA TERM 3791 2836753 - 2836772 + r 100 -10.7 -5.09426 | opp_overlap 2836753 TTAATAGATAAAAAA GCCCGAG AAATAA CTCGGGC TTTTTTAAAGTTAAA dbh 2837088 - 2836813 - | DNA-binding protein HU CPE2480 2838756 - 2837305 - | MazG family protein TERM 3792 2837511 - 2837499 - G 70 -4.1 -4.96646 | TTATACAAGCAAAAA GTAAG TCA CCTAC TTCACCTTCTATTAT spoVB 2840318 - 2838786 - | stage V sporulation protein B TERM 3793 2839677 - 2839689 + g 85 -4.9 -5.59879 | ACCTTTTATCTTACC TAGTT TAA AACTA TTTTTTATCTTTCTA TERM 3794 2839909 - 2839897 - G 74 -3.3 -5.41746 | opp_overlap 2839897 2839901 2839904 AATCCTTGAAAAAAA CCTCT AAT AGGGG TTATTATTCCTATTA TERM 3795 2840264 - 2840244 - G 75 -4.7 -5.08824 | overlap 2840248 TGGCCATCTAAAAAA TAAACCAAG AAA CTTGGCTAA AATACCAGCACAAGC TERM 3796 2840260 - 2840248 - G 90 -7.7 -5.0666 | overlap 2840244 CATCTAAAAAATAAA CCAAG AAA CTTGG CTAAAATACCAGCAC CPE2482 2841046 - 2840498 - | stage V sprulation protein T TERM 3797 2841230 - 2841205 - R 100 -13.5 -5.82388 | opp_overlap 2841205 AAACTCTAAAAAAAA GACTTATGGAA TAAC TTCCATAAGTC TTAATAAAAACTATT TERM 3798 2841205 - 2841230 + r 100 -13.5 -3.15427 | opp_overlap 2841205 AAACTCTAAAAAAAA GACTTATGGAA TAAC TTCCATAAGTC TTAATAAAAACTATT prsA 2842269 - 2841241 - | peptidylprolyl isomerase mfd 2845858 - 2842370 - | transcription-repair coupling factor spoVC 2846473 - 2845907 - | peptidyl-tRNA hydrolase TERM 3799 2846584 - 2846561 - R 90 -6.8 -5.77677 | gap 1, opp_overlap 2846561 TAAAACAATAAAAAA CCCCTCAC-TA AAT TATGTGAAGGG TTATATTCTTTTAAT CPE2486 2847756 - 2846599 - | PDZ domain protein CPE2487 2849186 - 2847777 - | two-component sensor histidine kinase CPE2488 2849872 - 2849186 - | DNA-binding response regulator TERM 3800 2850136 - 2850120 - R 88 -5.1 -5.94713 | opp_overlap 2850120 ATTTTATAAAAAAAA GAGCG ACATATG CGCTC TTTTTTTTAGTCTTG TERM 3801 2850120 - 2850136 + r 88 -5.1 -5.94597 | opp_overlap 2850120 ATTTTATAAAAAAAA GAGCG ACATATG CGCTC TTTTTTTTAGTCTTG prs 2851102 - 2850143 - | ribose-phosphate pyrophosphokinase TERM 3802 2851157 - 2851168 + r 82 -4.4 -5.63517 | ATTTGTATATTTAAT GCTT ATTT AAGC TTTTTTCTTTCAACC CPE2490 2852523 - 2851159 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 3803 2852726 - 2852703 - R 100 -11.2 -5.71712 | opp_overlap 2852708 2852722 TGTTAGACAAAAAAA TAAAAGGAAG ATAT CTTCCTTTTA TTAAAATTATTCTTG TERM 3804 2852708 - 2852721 + r 77 -6.7 -4.68705 | opp_overlap 2852703 GACAAAAAAATAAAA GGAAG ATAT CTTCC TTTTATTAAAATTAT spoVG 2853005 - 2852733 - | regulatory protein SpoVG purR 2853919 - 2853116 - | purine operon repressor murC 2854253 - 2855653 + | UDP-N-acetylmuramate--L-alanine ligase TERM 3805 2855687 - 2855665 - f 73 -7.9 -3.83214 | opp_overlap 2855665 GTAAATTAATTTAAA GACTATTTT ATTAA AAAATAGTC TTTTTTTTATTTGCA TERM 3806 2855665 - 2855687 + F 100 -7.9 -6.23545 | opp_overlap 2855665 GTAAATTAATTTAAA GACTATTTT ATTAA AAAATAGTC TTTTTTTTATTTGCA TERM 3807 2855755 - 2855780 + F 73 -7.7 -3.79481 | TTCTCTCTTTGTACA TTTGTGTGTAA GCGA TAACACACAAA TTTGAATTGAATTTC CPE2494 2855996 - 2856904 + | transcriptional regulator punA 2857020 - 2857838 + | purine nucleoside phosphorylase TERM 3808 2858588 - 2858557 - g 71 -7.4 -3.71075 | opp_overlap 2858549, overlap 2858555 2858585 ATATTAGCTAAAATA TTAGTTCCTGAAAC TGAA GTTCCTGAAACTAA AGGTGGCGGAACTTT CPE2496 2857918 - 2859144 + | nucleoside transporter TERM 3809 2859209 - 2859174 - T 100 -13.6 -4.72386 | opp_overlap 2859179, overlap 2859179 TAAATTACTTAAAAA TAAAAGAACATTCTTC AATT GAAGAATGTTCTTTTT ATTTAAACTATTATT TERM 3810 2859179 - 2859204 + T 100 -13.5 -5.28942 | opp_overlap 2859174 2859179 TACTTAAAAATAAAA GAACATTCTTC AATT GAAGAATGTTC TTTTTATTTAAACTA TERM 3811 2859204 - 2859179 - T 100 -13.5 -5.2853 | opp_overlap 2859179, overlap 2859174 TACTTAAAAATAAAA GAACATTCTTC AATT GAAGAATGTTC TTTTTATTTAAACTA CPE2497 2860296 - 2859220 - | metallopeptidase, family M24 CPE2498 2860464 - 2861162 + | Ser/Thr protein phosphatase family protein CPE2499 2862513 - 2861299 - | heme/steroid binding domain protein TERM 3812 2862845 - 2862878 + H 90 -6.8 -5.64421 | gap 1, opp_overlap 2862845 GGTACCGCGAATAAT GCCATTCGTCC-CAT TAATT ATGTGGATGAAGGGC TTTTTTATTTGGAAT asnC 2862925 - 2864322 + | asparaginyl-tRNA synthetase CPE2501 2866103 - 2864622 - | leucyl aminopeptidase TERM 3813 2866251 - 2866232 - R 100 -9.4 -5.94214 | opp_overlap 2866232 AATATAAGAAAAAAA GCTTAACT AAAA AGTTAAGC TTATGCTAATCCAAT TERM 3814 2866232 - 2866251 + r 82 -9.4 -3.44229 | opp_overlap 2866232 AATATAAGAAAAAAA GCTTAACT AAAA AGTTAAGC TTATGCTAATCCAAT CPE2502 2866803 - 2866252 - | hypothetical protein nrdG 2867442 - 2866933 - | anaerobic ribonucleoside-triphosphate reductase activating protein CPE2504 2867551 - 2868159 + | hypothetical protein TERM 3815 2868213 - 2868161 - T 79 -8.1 -4.11081 | opp_overlap 2868166, overlap 2868166 AAATAATAGTATAAA TAAAAGGTTATATTAATAGAATC TTATTTT GAAACTATTAATATAACCTTTTT TATTTATACTGTAAT TERM 3816 2868166 - 2868208 + T 100 -8 -5.73978 | opp_overlap 2868161 2868166 ATAGTATAAATAAAA GGTTATATTAATAGAATC TTATTTT GAAACTATTAATATAACC TTTTTTATTTATACT TERM 3817 2868208 - 2868166 - T 90 -8 -5.03227 | opp_overlap 2868166, overlap 2868161 ATAGTATAAATAAAA GGTTATATTAATAGAATC TTATTTT GAAACTATTAATATAACC TTTTTTATTTATACT CPE2505 2869608 - 2868217 - | MATE efflux family protein TERM 3818 2869685 - 2869645 - R 100 -9.9 -5.9667 | opp_overlap 2869650 AAAAATACAAAAAAA TAAAAGCAAATGGGTAG TCTTTAG CCGCCCATCTGCTTTTA AATCCTATTAATTGT TERM 3819 2869854 - 2869832 - R 72 -8.6 -3.15013 | overlap 2869828 2869826 ATTGTATAATATACA TCTCACTAAA GTT TTTAGTGAAA GTACACCAAATTACT TERM 3820 2869982 - 2869943 - R 100 -11 -5.26875 | opp_overlap 2869943 TGTTGAATTAAAAAA TAATCCACAGGTAAAT TAAGTTCT ATTTGCCTGTGGATTA TTTTGAATTTATATA TERM 3821 2869943 - 2869982 + r 100 -13.2 -4.41177 | opp_overlap 2869943 TGTTGAATTAAAAAA TAATCCACAGGTAAAT TAAGTTCT ATTTGCCTGTGGATTA TTTTGAATTTATATA add 2870989 - 2869991 - | adenosine deaminase TERM 3822 2871080 - 2871138 + r 90 -10 -3.71848 | gap 1, opp_overlap 2871086, overlap 2871086 TAAAAAAGGTTCAAA -AAAAAATTCTTGATTACGAAGAAAGC AAATAA GCTTTCTTCGTAATCAAGAATTCTCGG TTCTTGGTAGAGACC TERM 3823 2871131 - 2871086 - R 100 -23.8 -6.07627 | opp_overlap 2871080 2871086 AGGTTCAAAAAAAAA TTCTTGATTACGAAGAAAGC AAATAA GCTTTCTTCGTAATCAAGAA TTCTCGGTTCTTGGT TERM 3824 2871086 - 2871131 + r 100 -23.8 -3.48153 | opp_overlap 2871086, overlap 2871080 AGGTTCAAAAAAAAA TTCTTGATTACGAAGAAAGC AAATAA GCTTTCTTCGTAATCAAGAA TTCTCGGTTCTTGGT nrdD 2873499 - 2871382 - | anaerobic ribonucleoside triphosphate reductase TERM 3825 2874474 - 2874464 - g 70 -4 -4.89521 | ATATCTGAAATAAAA CTTA ATC TAAG TGACTATTACAAAAC CPE2508 2873759 - 2874826 + | hypothetical protein TERM 3826 2874863 - 2874903 + F 83 -9.4 -3.55592 | gap 1, opp_overlap 2874865 2874868, overlap 2874857 2874861 TAAACCGTTTTCTAA GAGAATAATCTGTT-TTAA TATA TTATTAACAGATTATTCTC TCTTTGTACCATTAT TERM 3827 2874908 - 2874938 + F 75 -9.3 -2.53613 | gap 1, opp_overlap 2874922 2874925, overlap 2874907 2874916 2874918 2874922 AGATTATTCTCTCTT TG-TACCATTATCA ATAT TGATAATGGTATCA GTATTGATATATAAT TERM 3828 2874916 - 2874947 + F 87 -11.2 -2.93991 | opp_overlap 2874922 2874925, overlap 2874908 2874907 2874918 2874922 CTCTCTTTGTACCAT TATCAATATTGATA ATGG TATCAGTATTGATA TATAATTCAGTTAAA TERM 3829 2874918 - 2874945 + F 78 -9.4 -3.01984 | opp_overlap 2874922 2874925, overlap 2874908 2874907 2874916 2874922 CTCTTTGTACCATTA TCAATATTGATA ATGG TATCAGTATTGA TATATAATTCAGTTA CPE2509 2875086 - 2875931 + | degV family protein CPE2510 2875934 - 2876374 + | PadR family transcriptional regulator TERM 3830 2876379 - 2876410 + T 100 -14.8 -4.72729 | opp_overlap 2876379 2876389 TTTATAACTAAAGAA GATTCTAAAAGATT ATAT AATCTTTTAGAATC TTTTAATTTTAATTA TERM 3831 2876410 - 2876379 - T 100 -14.8 -4.12296 | opp_overlap 2876379, overlap 2876389 TTTATAACTAAAGAA GATTCTAAAAGATT ATAT AATCTTTTAGAATC TTTTAATTTTAATTA fer 2876614 - 2876426 - | ferredoxin TERM 3832 2876709 - 2876755 + r 100 -11.2 -4.00782 | opp_overlap 2876714, overlap 2876714 TTAATTAAAAAAATA AAAAAGAATGAACCAAAATAAT ATA ACTATTTTGGTCCATTCTTTTA TTTATACTAATATAA TERM 3833 2876714 - 2876750 + r 100 -11.1 -5.02323 | opp_overlap 2876714, overlap 2876709 TAAAAAAATAAAAAA GAATGAACCAAAATAAT ATA ACTATTTTGGTCCATTC TTTTATTTATACTAA TERM 3834 2876750 - 2876714 - R 100 -15.5 -6.12458 | opp_overlap 2876709 2876714 TAAAAAAATAAAAAA GAATGAACCAAAATAAT ATA ACTATTTTGGTCCATTC TTTTATTTATACTAA CPE2512 2877616 - 2876762 - | Mrp protein CPE2513 2878476 - 2877637 - | putative lipoprotein CPE2514 2879236 - 2878466 - | prolipoprotein diacylglyceryl transferase TERM 3835 2879258 - 2879305 + r 100 -19 -3.48684 | opp_overlap 2879263 2879270, overlap 2879259 2879263 2879270 CTCCAATATTTATTT GTAAATTTAAAAGAGAAGCATA TTAT TATGCTTCTCTTTTAAATTTAA TTATAATACTTCTAC TERM 3836 2879259 - 2879304 + r 100 -22.5 -2.68729 | opp_overlap 2879263 2879270, overlap 2879258 2879263 2879270 TCCAATATTTATTTG TAAATTTAAAAGAGAAGCATA TTAT TATGCTTCTCTTTTAAATTTA ATTATAATACTTCTA TERM 3837 2879300 - 2879263 - R 100 -18.9 -3.57971 | opp_overlap 2879259 2879258 2879263 2879270, overlap 2879270 ATATTTATTTGTAAA TTTAAAAGAGAAGCATA TTAT TATGCTTCTCTTTTAAA TTTAATTATAATACT TERM 3838 2879263 - 2879300 + r 100 -18.9 -4.0251 | opp_overlap 2879263 2879270, overlap 2879259 2879258 2879270 ATATTTATTTGTAAA TTTAAAAGAGAAGCATA TTAT TATGCTTCTCTTTTAAA TTTAATTATAATACT TERM 3839 2879270 - 2879293 + r 100 -12.6 -4.39318 | opp_overlap 2879263 2879270, overlap 2879263 2879259 2879258 TTTGTAAATTTAAAA GAGAAGCATA TTAT TATGCTTCTC TTTTAAATTTAATTA TERM 3840 2879293 - 2879270 - R 100 -12.6 -4.35524 | opp_overlap 2879270 2879263 2879259 2879258, overlap 2879263 TTTGTAAATTTAAAA GAGAAGCATA TTAT TATGCTTCTC TTTTAAATTTAATTA CPE2515 2879911 - 2879339 - | hypothetical protein TERM 3841 2880047 - 2880015 - R 100 -10.9 -5.76237 | opp_overlap 2880015 TACATAAATAAAAAA CTGTTTATATAGA AATGAAA TCTATATAAACAG TTTTTCTCTTGATTA TERM 3842 2880015 - 2880047 + r 100 -10.9 -5.1485 | opp_overlap 2880015 TACATAAATAAAAAA CTGTTTATATAGA AATGAAA TCTATATAAACAG TTTTTCTCTTGATTA CPE2516 2881682 - 2880060 - | hypothetical protein TERM 3843 2881771 - 2881742 - R 100 -10.3 -6.41881 | opp_overlap 2881744 GAGAACAAAAAAAAA GAGAATAAAAATT TAAA AATTCTTATTCTC TATAAATATTCTAGT ksgA 2882639 - 2881782 - | dimethyladenosine transferase CPE2518 2883199 - 2882651 - | primase-like protein TERM 3844 2883328 - 2883291 - R 73 -4.4 -5.26907 | gap 2, opp_overlap 2883291 2883293, overlap 2883286 2883293 TAATACAAAATAAAA TAGAGGG-T-CTAAAAGA ATAT TCTTTTAGAATCCCTCTC TTAAGTATTACCATT TERM 3845 2883326 - 2883293 - R 75 -7 -4.22673 | gap 2, opp_overlap 2883291 2883293, overlap 2883291 2883286 ATACAAAATAAAATA GAGGG-T-CTAAAAGA ATAT TCTTTTAGAATCCCTC TCTTAAGTATTACCA CPE2519 2884358 - 2883336 - | 3D/G5 domain protein TERM 3846 2883618 - 2883600 - G 80 -9.6 -3.22475 | opp_overlap 2883600 2883599, overlap 2883598 TCCATCTCCAGAATA GGCAGTAG CTT CTACTACC ATTGCTTTTTTATAA TERM 3847 2884554 - 2884531 - R 80 -6.2 -5.1287 | gap 1, opp_overlap 2884531 TTTATATTTAAAAAA GTACACTA-TA TTA TATTAGTGTAC TTTCCATGTTATTAC CPE2520 2885372 - 2884602 - | hydrolase, TatD family CPE2521 2886890 - 2885391 - | hypothetical protein TERM 3848 2885871 - 2885883 + g 72 -4.9 -4.91357 | ATTTAGTTTACTTAT TATAG AAT CTATA TTTTCTTCTGTATTT TERM 3849 2886172 - 2886186 + g 76 -2.8 -5.60689 | overlap 2886179 TTATATGAAACCTCA TCATCT CTA AGAAGA TTTTTTATTATATCC TERM 3850 2887198 - 2887186 - g 74 -6.3 -4.42081 | AATAGAAATTCAAAA GTTAG ATT CTAAC GGAAACATATTAGTG CPE2522 2886992 - 2887672 + | cyclic nucleotide-binding domain protein TERM 3851 2887881 - 2887939 + T 100 -7.2 -6.01369 | gap 1, opp_overlap 2887865 2887893 2887896, overlap 2887888 2887893 CCTAACCTTAAACCT TAAGATGTAGAATAAGCCTTGTTTCTA GATTAA TAGAAGCAAGGCTTATTTTAT-TTATA TTTTTTTATTCTTTA TERM 3852 2887888 - 2887933 + T 100 -16.6 -4.74406 | opp_overlap 2887865 2887893 2887896, overlap 2887881 2887893 TTAAACCTTAAGATG TAGAATAAGCCTTGTTTCTA GATTAA TAGAAGCAAGGCTTATTTTA TTTATATTTTTTTAT TERM 3853 2887928 - 2887893 - T 95 -12.1 -3.42503 | opp_overlap 2887888 2887881 2887893, overlap 2887896 CCTTAAGATGTAGAA TAAGCCTTGTTTCTA GATTAA TAGAAGCAAGGCTTA TTTTATTTATATTTT TERM 3854 2887893 - 2887928 + T 100 -14.3 -5.15682 | opp_overlap 2887893 2887896, overlap 2887888 2887881 CCTTAAGATGTAGAA TAAGCCTTGTTTCTA GATTAA TAGAAGCAAGGCTTA TTTTATTTATATTTT TERM 3855 2887925 - 2887896 - T 86 -9.4 -3.84639 | opp_overlap 2887893 2887888 2887881, overlap 2887893 TAAGATGTAGAATAA GCCTTGTTTCTA GATTAA TAGAAGCAAGGC TTATTTTATTTATAT metS 2889479 - 2887935 - | methionyl-tRNA synthetase TERM 3856 2889566 - 2889532 - R 87 -6 -5.74122 | gap 1, opp_overlap 2889532 TATGATACAAAAAAA CTCTTATATTC-CAC AATCTA GTATGAATATAAGAG TTTTTTAATTTTACT TERM 3857 2889532 - 2889566 + r 75 -3.8 -5.48054 | gap 1, opp_overlap 2889532 TATGATACAAAAAAA CTCTTATATTC-CAC AATCTA GTATGAATATAAGAG TTTTTTAATTTTACT metG 2891517 - 2889580 - | methionyl-tRNA synthetase TERM 3858 2891577 - 2891604 + H 74 -8.4 -3.34344 | opp_overlap 2891579, overlap 2891578 TTCAAAAATATAAAA AACCTCTATGGG AAAT CCCATAGAGGCG TTAATTACGCGATAC TERM 3859 2891578 - 2891603 + H 86 -11.9 -2.60392 | opp_overlap 2891579, overlap 2891577 TCAAAAATATAAAAA ACCTCTATGGG AAAT CCCATAGAGGC GTTAATTACGCGATA TERM 3860 2891602 - 2891579 - H 100 -15.4 -5.69068 | opp_overlap 2891578 2891577 CAAAAATATAAAAAA CCTCTATGGG AAAT CCCATAGAGG CGTTAATTACGCGAT TERM 3861 2891669 - 2891681 + H 70 -4.9 -4.75472 | TCACTAAGTAACTCC TAAGT TTA ACTTA TTTTATTACTCTGCA CPE2525 2892007 - 2892588 + | hypothetical protein CPE2526 2892610 - 2893119 + | hypothetical protein TERM 3862 2893257 - 2893275 + T 79 -9 -3.6968 | opp_overlap 2893256 2893257, overlap 2893251 AAACTTAAGTGAAAG TCCAAATT TTC AATTTGGA TTCTTGAACTTATGC TERM 3863 2893275 - 2893257 - T 73 -9 -2.86965 | opp_overlap 2893251 2893257, overlap 2893256 AAACTTAAGTGAAAG TCCAAATT TTC AATTTGGA TTCTTGAACTTATGC CPE2527 2895163 - 2893448 - | hypothetical protein TERM 3864 2893915 - 2893901 - G 70 -8.6 -2.53822 | opp_overlap 2893898 2893910 2893911 2893913, overlap 2893900 2893898 2893910 2893913 TGCATCTGATAATAC TCCTAC TAA GTAGGA AGCAGTTCCTAATTC TERM 3865 2895274 - 2895248 - R 100 -11.7 -5.01732 | opp_overlap 2895248 AATTTCTGCAAAAAA GACCTTAGGCT TGATC AACCTAAGGTC TTAATACTTAATAAA TERM 3866 2895248 - 2895274 + r 80 -9.5 -3.29096 | opp_overlap 2895248 AATTTCTGCAAAAAA GACCTTAGGCT TGATC AACCTAAGGTC TTAATACTTAATAAA TERM 3867 2895546 - 2895519 - R 79 -10.2 -2.72463 | opp_overlap 2895518 2895517 2895519, overlap 2895524 ATTCACTTTTAATTA TTATATTGTATA CATT TATACAATATAA CTATGTTTCTTTCAA TERM 3868 2895519 - 2895546 + r 79 -10.2 -2.68607 | opp_overlap 2895519 2895524, overlap 2895518 2895517 ATTCACTTTTAATTA TTATATTGTATA CATT TATACAATATAA CTATGTTTCTTTCAA CPE2528 2897202 - 2895589 - | hypothetical protein CPE2529 2897680 - 2897342 - | hypothetical protein TERM 3869 2897649 - 2897659 + g 91 -5.4 -5.66868 | GCAGTTCCAATTCCG GCTA ATA TAGC TTTTTTTAATTCATT CPE2530 2899032 - 2897788 - | xaa-pro aminopeptidase TERM 3870 2899129 - 2899153 + r 100 -14.5 -4.57503 | opp_overlap 2899129 TTTTATAGAAAAAAA TACTCACTAGA TAA TCTAGTGAGTA TTTATTATTATCTTA TERM 3871 2899153 - 2899129 - R 100 -14.5 -5.71712 | opp_overlap 2899129 TTTTATAGAAAAAAA TACTCACTAGA TAA TCTAGTGAGTA TTTATTATTATCTTA adhE 2901777 - 2899180 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase spmB 2902723 - 2902205 - | spore maturation protein B spmA 2903313 - 2902735 - | spore maturation protein A TERM 3872 2903227 - 2903197 - G 70 -6.2 -4.17448 | overlap 2903186 TAAGGAAATTATAAA CTTCACAGCACCTT CTG AAGATTCTGTTAAG CCAGTTGTAATCAAC CPE2534 2903428 - 2903607 + | hypothetical protein TERM 3873 2903649 - 2903605 - T 100 -17 -2.83409 | gap 1, opp_overlap 2903614, overlap 2903614 GACGAAGGTATTATA TAAAAGAAAGCTGAGTTTAGA AATT TCTAAACTCAGCTTT-TTTTA AATCGCTTTTTCATC TERM 3874 2903641 - 2903614 - T 100 -15.8 -4.84146 | opp_overlap 2903614, overlap 2903605 ATTATATAAAAGAAA GCTGAGTTTAGA AATT TCTAAACTCAGC TTTTTTTAAATCGCT TERM 3875 2903614 - 2903641 + T 100 -15.8 -5.47821 | opp_overlap 2903605 2903614 ATTATATAAAAGAAA GCTGAGTTTAGA AATT TCTAAACTCAGC TTTTTTTAAATCGCT CPE2535 2905014 - 2903647 - | MATE efflux family protein CPE2536 2905835 - 2905203 - | hypothetical protein TERM 3876 2905370 - 2905352 - G 82 -6.8 -4.98857 | overlap 2905353 AGTTAATTATAAAAA CTAAAGCA AAC TGCTTTAA AAGAATATCTAAAAA TERM 3877 2905369 - 2905353 - G 74 -8.1 -3.5823 | overlap 2905352 GTTAATTATAAAAAC TAAAGCA AAC TGCTTTA AAAGAATATCTAAAA CPE2537 2906640 - 2905948 - | hypothetical protein CPE2538 2907078 - 2906644 - | hypothetical protein TERM 3878 2907148 - 2907122 - R 100 -8.2 -6.02919 | opp_overlap 2907119 CCATAAATAAAAAAA GGTAACATAA TTTAATC TTATGTTACC TAATGATTATGCATT ccpA 2908175 - 2907177 - | transcriptional regulator CPE2540 2908507 - 2908836 + | rhodanese-like domain protein TERM 3879 2908846 - 2908875 + T 100 -10.9 -4.42639 | opp_overlap 2908851, overlap 2908851 AAATAAATTACATAA AAAAAGAGAGCAA TTAC TTGCTCTCTTTTA TTTTAATTAAGCTCT TERM 3880 2908851 - 2908870 + T 100 -10.8 -5.18643 | opp_overlap 2908851, overlap 2908846 AATTACATAAAAAAA GAGAGCAA TTAC TTGCTCTC TTTTATTTTAATTAA TERM 3881 2908870 - 2908851 - T 100 -10.8 -5.75478 | opp_overlap 2908851 2908846 AATTACATAAAAAAA GAGAGCAA TTAC TTGCTCTC TTTTATTTTAATTAA ileS 2912001 - 2908882 - | isoleucyl-tRNA synthetase TERM 3882 2912114 - 2912094 - H 100 -8.3 -6.34616 | opp_overlap 2912094, overlap 2912110 GTAAAATAAAAAAAA CTCCATCCT AAA AGGACGAAG TTATATTCGCTATAC TERM 3883 2912561 - 2912523 - H 82 -10.1 -2.9518 | opp_overlap 2912523 2912528 2912531, overlap 2912528 2912531 2912537 TTTAAGACTTATATA TCAAATAATAAAAATTA ATCAA TAATTTTTATTATTTAA TGTTGACTTTTCTTA TERM 3884 2912556 - 2912528 - H 75 -7.8 -3.89212 | opp_overlap 2912528 2912523 2912531, overlap 2912523 2912531 2912537 GACTTATATATCAAA TAATAAAAATTA ATCAA TAATTTTTATTA TTTAATGTTGACTTT TERM 3885 2912528 - 2912556 + H 75 -7.8 -3.95456 | opp_overlap 2912523 2912528 2912531 2912537, overlap 2912523 2912531 GACTTATATATCAAA TAATAAAAATTA ATCAA TAATTTTTATTA TTTAATGTTGACTTT CPE2542 2912668 - 2912883 + | [2Fe-2S]-binding domain protein TERM 3886 2912934 - 2912951 + T 100 -9.9 -5.46698 | opp_overlap 2912934 TGTATCTCCCTAAAA GAGTACC CTCG GGTACTC TTTTTTACTTTTACA TERM 3887 2912951 - 2912934 - T 93 -9.9 -4.08767 | opp_overlap 2912934 TGTATCTCCCTAAAA GAGTACC CTCG GGTACTC TTTTTTACTTTTACA TERM 3888 2913005 - 2913043 + T 70 -3.2 -5.34381 | opp_overlap 2913007, overlap 2913007 TTAAAAAAAATAAAA AAGCCTGTATCAAATTTA AAA TTATTTTGATACAAGCTC TTTTTATTTAAATTT TERM 3889 2913041 - 2913007 - T 100 -8 -6.17033 | opp_overlap 2913007 2913005 AAAAAAAATAAAAAA GCCTGTATCAAATTTA AAA TTATTTTGATACAAGC TCTTTTTATTTAAAT CPE2543 2913659 - 2913051 - | hypothetical protein CPE2544 2915751 - 2913823 - | ABC transporter CPE2545 2916487 - 2915882 - | hypothetical protein TERM 3890 2916100 - 2916122 + g 73 -8.6 -3.08073 | opp_overlap 2916098 2916103, overlap 2916103 CAGCCATAAGTGAGC CAAGGAATAT TTT ATATTTCTTG TCTATTCCAAATGAT TERM 3891 2916324 - 2916312 - G 86 -2.7 -6.0427 | opp_overlap 2916317 AGCATAGAAAAAAAA GTTAT TCC ACAAC CTTGAGGATATCTAA CPE2546 2917152 - 2916487 - | transcriptional regulator TERM 3892 2917321 - 2917299 - R 100 -12.1 -5.55001 | opp_overlap 2917299 2917295 TAATAAAAAATAAAA GCTACATCC ATGTA GGATGTAGC TTAATTTATAAAAAG TERM 3893 2917299 - 2917321 + r 95 -12.1 -3.6053 | opp_overlap 2917299, overlap 2917295 TAATAAAAAATAAAA GCTACATCC ATGTA GGATGTAGC TTAATTTATAAAAAG CPE2547 2917891 - 2917577 - | hypothetical protein TERM 3894 2918675 - 2918645 - g 83 -7 -5.08011 | AAAATGGTCAAAAAA CTGGTTTCTTCTTA GAT CAAAAAGAAAACAG AGCTGCAATGCATAG CPE2548 2918053 - 2919228 + | putative methyltransferase TERM 3895 2919275 - 2919260 - T 85 -3.4 -6.2845 | opp_overlap 2919260 AAGTATAAAAAAAAA TATATT GGTT AATATA TTAATGTAGCAAAAA TERM 3896 2919549 - 2919587 + T 85 -8.3 -4.55697 | opp_overlap 2919551 2919553 2919557, overlap 2919553 2919557 TATTAGATGTATTAA AAGAGAAAGGTATCTGA TTTTT TCAGATACCTTTCTTAA TTTATTTATGAAACT TERM 3897 2919585 - 2919551 - T 100 -13.1 -4.29738 | opp_overlap 2919549 2919553 2919557, overlap 2919553 2919557 TTAGATGTATTAAAA GAGAAAGGTATCTGA TTTTT TCAGATACCTTTCTT AATTTATTTATGAAA TERM 3898 2919553 - 2919583 + T 100 -15.7 -3.79164 | opp_overlap 2919551 2919553 2919557, overlap 2919549 2919557 AGATGTATTAAAAGA GAAAGGTATCTGA TTTTT TCAGATACCTTTC TTAATTTATTTATGA TERM 3899 2919583 - 2919553 - T 100 -15.7 -3.74902 | opp_overlap 2919553 2919549 2919557, overlap 2919551 2919557 AGATGTATTAAAAGA GAAAGGTATCTGA TTTTT TCAGATACCTTTC TTAATTTATTTATGA TERM 3900 2919557 - 2919579 + T 100 -10.7 -4.46742 | opp_overlap 2919553 2919551 2919557, overlap 2919553 2919549 GTATTAAAAGAGAAA GGTATCTGA TTTTT TCAGATACC TTTCTTAATTTATTT TERM 3901 2919579 - 2919557 - T 100 -10.7 -4.48449 | opp_overlap 2919557 2919553 2919549, overlap 2919553 2919551 GTATTAAAAGAGAAA GGTATCTGA TTTTT TCAGATACC TTTCTTAATTTATTT CPE2549 2919940 - 2919593 - | hypothetical protein CPE2550 2921196 - 2919943 - | oxidoreductase, pyridine nucleotide-disulphide family TERM 3902 2919973 - 2919985 + g 71 -3.4 -5.20154 | TAATGAAATTGTTAT TGCT CCTTT AGCA TTTTTTAGCTTATCT glpA 2922639 - 2921209 - | glycerol-3-phosphate dehydrogenase TERM 3903 2922719 - 2922672 - R 100 -11.6 -5.93252 | opp_overlap 2922672 2922675 TTTAAAAATAAAAAA GAACTAAACTCAAAAAAGACAT AAGA ATATCCTTTTTGTGTCTAGCTC TCTTCTCTCTTACAC glpK 2924307 - 2922805 - | glycerol kinase glpP 2924887 - 2924327 - | glycerol uptake operon antiterminator glpF 2925636 - 2924929 - | glycerol uptake facilitator protein TERM 3904 2925761 - 2925774 + r 70 -2.5 -5.54403 | CTTACACAAGTTGAA TATAT ACGT ATATA TTTTTGTTGTTTTTT TERM 3905 2925901 - 2925861 - R 75 -6.5 -4.37658 | gap 1, opp_overlap 2925861 2925900 AATCTTTCCATAAAA TAAAAAAAGAGGGATATT GCCCTT AAT-CCCCTCTTTTTCTA ATTATTTATCAAATA CPE2555 2926346 - 2925903 - | hypothetical protein CPE2556 2927350 - 2926607 - | 2-phosphosulfolactate phosphatase TERM 3906 2927033 - 2927051 + g 71 -3.2 -5.33848 | AGCTCTAGTTCCATT TGTAGTAG ACA TTATTACA TTTTTTCCTTCTACT CPE2557 2928312 - 2927377 - | radical SAM protein family protein TERM 3907 2928389 - 2928359 - R 86 -5.7 -5.79595 | opp_overlap 2928359 2928356 2928352 2928347, overlap 2928352 CTTTAAAATAAAAAA GTTAATCATAA ATTTAAGGG TTATGATTAAC TTATTTTATATTATA CPE2558 2929490 - 2928405 - | hypothetical protein CPE2559 2929650 - 2930702 + | hypothetical protein TERM 3908 2930751 - 2930712 - T 100 -10.2 -5.30448 | opp_overlap 2930713 2930718, overlap 2930713 2930718 AAATAAAGATAAAAA GTAAAAGCTGAGCAAATT ATAT AACTTGCTCAGCTTTAAT ATTTAATAAATTATC TERM 3909 2930750 - 2930713 - T 100 -13.7 -3.74608 | opp_overlap 2930713 2930718, overlap 2930712 2930718 AATAAAGATAAAAAG TAAAAGCTGAGCAAATT ATAT AACTTGCTCAGCTTTAA TATTTAATAAATTAT TERM 3910 2930713 - 2930750 + T 95 -11.5 -3.48506 | opp_overlap 2930713 2930712 2930718, overlap 2930718 AATAAAGATAAAAAG TAAAAGCTGAGCAAATT ATAT AACTTGCTCAGCTTTAA TATTTAATAAATTAT TERM 3911 2930718 - 2930745 + T 100 -11.4 -4.02719 | opp_overlap 2930713 2930712 2930718, overlap 2930713 AGATAAAAAGTAAAA GCTGAGCAAATT ATAT AACTTGCTCAGC TTTAATATTTAATAA TERM 3912 2930745 - 2930718 - T 100 -13.6 -4.84033 | opp_overlap 2930718 2930713, overlap 2930713 2930712 AGATAAAAAGTAAAA GCTGAGCAAATT ATAT AACTTGCTCAGC TTTAATATTTAATAA CPE2560 2932070 - 2930754 - | spore cortex-lytic enzyme SleC CPE2561 2933941 - 2932193 - | Ser-type protease CPE2562 2935641 - 2933944 - | protease CspB TERM 3913 2934110 - 2934089 - G 71 -2.3 -5.36441 | TCTCCATATAAAAAA GGATCATTA TTTC TTATAATCC CCCATTCAAAAAGAA TERM 3914 2935125 - 2935157 + g 71 -2.1 -5.3658 | TTTCAGGTACAATGC TAAATGGATCTTCAG ATT TTAAAGCTTCATTTA TTTTATTTTTATCAT CPE2563 2937393 - 2935657 - | Ser-type protease TERM 3915 2936546 - 2936536 - G 72 -6.8 -4.1523 | opp_overlap 2936542 CGTAACTACAAATAA GGAG TTT CTCC CCGAGATTTTAGTAT TERM 3916 2937534 - 2937478 - R 100 -19.3 -3.67283 | opp_overlap 2937480 2937494, overlap 2937480 2937486 2937494 AACCAACATAAAAAG TATTTAAATATAAAAAGGACAGTTCTA ATC TAGAACTGTCCTTTCTGTATTTAAATT TATAAATCAAATTCT TERM 3917 2937480 - 2937532 + r 100 -21.9 -3.92641 | opp_overlap 2937478 2937480 2937486 2937494, overlap 2937494 CCAACATAAAAAGTA TTTAAATATAAAAAGGACAGTTCTA ATC TAGAACTGTCCTTTCTGTATTTAAA TTTATAAATCAAATT TERM 3918 2937532 - 2937480 - R 100 -21.9 -3.39242 | opp_overlap 2937480 2937494, overlap 2937478 2937486 2937494 CCAACATAAAAAGTA TTTAAATATAAAAAGGACAGTTCTA ATC TAGAACTGTCCTTTCTGTATTTAAA TTTATAAATCAAATT TERM 3919 2937526 - 2937486 - R 100 -16.5 -3.78018 | opp_overlap 2937480 2937494, overlap 2937480 2937478 2937494 TAAAAAGTATTTAAA TATAAAAAGGACAGTTCTA ATC TAGAACTGTCCTTTCTGTA TTTAAATTTATAAAT TERM 3920 2937518 - 2937494 - R 100 -15.9 -5.20783 | opp_overlap 2937494 2937480, overlap 2937486 2937480 2937478 ATTTAAATATAAAAA GGACAGTTCTA ATC TAGAACTGTCC TTTCTGTATTTAAAT TERM 3921 2937494 - 2937518 + r 100 -15.9 -4.28488 | opp_overlap 2937486 2937480 2937478 2937494, overlap 2937480 ATTTAAATATAAAAA GGACAGTTCTA ATC TAGAACTGTCC TTTCTGTATTTAAAT CPE2564 2938205 - 2937534 - | hypothetical protein CPE2565 2938580 - 2938206 - | hypothetical protein CPE2566 2939121 - 2938609 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-type TERM 3922 2939301 - 2939258 - R 70 -5 -4.855 | TAAAAATAAAAATAA GACAACATAA-AGAATCCTA ATAACA TAG-ATTCTATTATGTTGCC CATTTAGAGTTCAAC CPE2567 2939631 - 2939362 - | hypothetical protein TERM 3923 2939780 - 2939764 - R 70 -3.1 -5.40072 | overlap 2939739 TTTTTTGTAAAAAAA TTTCTTA AAA TAAAAAA TCTACAGAAATACTA CPE2568 2940648 - 2939866 - | glutamate racemase CPE2569 2940944 - 2942845 + | glutamine synthetase TERM 3924 2942878 - 2942854 - T 90 -5.9 -5.9218 | TATATAATAAAAAAA GAAATCAAT GCTTTAA ATTGATTTC TCATACTTTAAAGAA TERM 3925 2942919 - 2942895 - T 86 -8.7 -4.45117 | opp_overlap 2942895 CATACTTTAAAGAAA TGACCTTTG AAATTAA CAAAGGTCA TTTTATATTCTTATA TERM 3926 2942895 - 2942919 + T 93 -8.7 -4.82162 | opp_overlap 2942895 CATACTTTAAAGAAA TGACCTTTG AAATTAA CAAAGGTCA TTTTATATTCTTATA CPE2570 2943219 - 2942935 - | hypothetical protein TERM 3927 2943391 - 2943365 - R 79 -3.8 -5.7946 | opp_overlap 2943366, overlap 2943366 TTGTCAAGAAAAAAA GGGATGTAAT CATTCAT ATTACATCCT TTTTTCTATAAAATT TERM 3928 2943366 - 2943390 + r 90 -7.3 -5.37043 | opp_overlap 2943365 2943366 TGTCAAGAAAAAAAG GGATGTAAT CATTCAT ATTACATCC TTTTTTCTATAAAAT TERM 3929 2943390 - 2943366 - R 73 -7.3 -4.06592 | opp_overlap 2943366, overlap 2943365 TGTCAAGAAAAAAAG GGATGTAAT CATTCAT ATTACATCC TTTTTTCTATAAAAT CPE2571 2944098 - 2943457 - | hypothetical protein TERM 3930 2944696 - 2944649 - R 90 -5.8 -5.88565 | overlap 2944654 GGTATAATAAAAAAA TAAAAGTCCTATTTAGCTTCAG TTAA CCAAAACTAAATAGAACTTATT TTATATTATTAATAC TERM 3931 2944691 - 2944654 - R 100 -10.1 -5.64328 | overlap 2944649 AATAAAAAAATAAAA GTCCTATTTAGCTTCAG TTAA CCAAAACTAAATAGAAC TTATTTTATATTATT carB 2947916 - 2944713 - | carbamoyl phosphate synthase large subunit TERM 3932 2944865 - 2944897 + g 75 -5.7 -4.82212 | CTCTCTTAGAATCAT TAGCTTTAGTTGGAG TAT TTACAACTAAATCTA TTTCTTTATTCTTTA TERM 3933 2945796 - 2945812 + g 71 -7.3 -3.84915 | opp_overlap 2945796 GGAAGGTCTAACTAA GATTGGG AAT CCTAATC TTCTTGCTTCCTCTA carA 2948978 - 2947929 - | carbamoyl phosphate synthase small subunit TERM 3934 2949075 - 2949120 + H 100 -9.2 -5.32599 | opp_overlap 2949075 TTTAATTAAAAGAAA GAGGTACTAGAGCGATTG CGTAAAAAAT CAATCACTCTAATACCTC TTTTTCTCTTTTATA TERM 3935 2949120 - 2949075 - H 100 -13.6 -4.78077 | opp_overlap 2949075 TTTAATTAAAAGAAA GAGGTACTAGAGCGATTG CGTAAAAAAT CAATCACTCTAATACCTC TTTTTCTCTTTTATA TERM 3936 2949185 - 2949203 + H 73 -7.6 -3.82946 | TTTAATTTCATCTGT TTTTTTGT ACA ACAAAAAA TTCTATTTAACATAA TERM 3937 2949372 - 2949416 + H 100 -14.5 -3.56643 | opp_overlap 2949376, overlap 2949376 TTTATTTTTCCCACA AAAAGTTAAGGTGCTAGATGT AAA ACACCTAGCACCTTAACTTAA TTTCAAACCTATACC TERM 3938 2949376 - 2949412 + H 100 -19.7 -3.51708 | opp_overlap 2949376, overlap 2949372 TTTTTCCCACAAAAA GTTAAGGTGCTAGATGT AAA ACACCTAGCACCTTAAC TTAATTTCAAACCTA TERM 3939 2949412 - 2949376 - H 100 -21.9 -4.82901 | opp_overlap 2949376 2949372 TTTTTCCCACAAAAA GTTAAGGTGCTAGATGT AAA ACACCTAGCACCTTAAC TTAATTTCAAACCTA CPE2574 2949636 - 2950292 + | hypothetical protein TERM 3940 2950290 - 2950310 + T 70 -7.1 -3.67737 | opp_overlap 2950294, overlap 2950294 TCCTTTATTTGTTAC TAAATAATA AAA TATTATTTA TTTCAAACTTTTATC CPE2575 2952020 - 2950548 - | [Fe] hydrogenase CPE2576 2952708 - 2952091 - | 3-methyladenine DNA glycosylase TERM 3941 2952921 - 2952944 + r 70 -3.8 -5.25699 | opp_overlap 2952921 AACAAAAAATAAAAA GCACCTTAAC AATA GTTTAAGTGC TTTTTCTTATATAAT TERM 3942 2952944 - 2952921 - R 90 -6 -5.84011 | opp_overlap 2952921 AACAAAAAATAAAAA GCACCTTAAC AATA GTTTAAGTGC TTTTTCTTATATAAT CPE2577 2953319 - 2953008 - | PTS system proA 2954667 - 2953420 - | gamma-glutamyl phosphate reductase proB 2955479 - 2954670 - | gamma-glutamyl kinase CPE2580 2956444 - 2955566 - | oxidoreductase, short chain dehydrogenase/reductase family CPE2581 2957281 - 2956508 - | oxidoreductase, short-chain dehydrogenase/reductase family TERM 3943 2957117 - 2957134 + g 85 -5.7 -5.4505 | opp_overlap 2957119 CAAATCAAATTTATA TATGTAA GCCC TTACATA TTTTTTCTTCGAAAA TERM 3944 2957308 - 2957328 + H 70 -4.1 -5.20216 | opp_overlap 2957308, overlap 2957310 TCTTATAAATAAATC CTTAATAAA ACA TTTATTATG TTTTTTGCTAATATG CPE2582 2957466 - 2958758 + | hypothetical protein TERM 3945 2958778 - 2958803 + F 100 -10.6 -5.74122 | opp_overlap 2958778 AAATTATAAATTAAA CTCCCTTATT AATATC AATAAGGGAG TTTTTTTATATACTG TERM 3946 2958803 - 2958778 - f 100 -11.3 -4.18693 | opp_overlap 2958778 AAATTATAAATTAAA CTCCCTTATTA ATAT CAATAAGGGAG TTTTTTTATATACTG CPE2583 2958849 - 2959076 + | hypothetical protein TERM 3947 2959061 - 2959102 + T 100 -16.3 -2.81256 | opp_overlap 2959061 2959067 2959071, overlap 2959063 2959067 2959071 TAATAATTCAAACAA TATAAATAAAGACTAACAC AGCT GTGTTAGTCTTCATTTATA TAATTAATAATATAT TERM 3948 2959102 - 2959061 - T 100 -18.5 -4.04773 | opp_overlap 2959061 2959063 2959067 2959071, overlap 2959067 2959071 TAATAATTCAAACAA TATAAATAAAGACTAACAC AGCT GTGTTAGTCTTCATTTATA TAATTAATAATATAT TERM 3949 2959063 - 2959100 + T 100 -14.5 -2.94962 | opp_overlap 2959061 2959067 2959071, overlap 2959061 2959067 2959071 ATAATTCAAACAATA TAAATAAAGACTAACAC AGCT GTGTTAGTCTTCATTTA TATAATTAATAATAT TERM 3950 2959096 - 2959067 - T 100 -13.1 -4.40333 | opp_overlap 2959063 2959061 2959067 2959071, overlap 2959061 2959071 TTCAAACAATATAAA TAAAGACTAACAC AGCT GTGTTAGTCTTCA TTTATATAATTAATA TERM 3951 2959067 - 2959096 + T 100 -10.9 -4.14541 | opp_overlap 2959067 2959061 2959071, overlap 2959063 2959061 2959071 TTCAAACAATATAAA TAAAGACTAACAC AGCT GTGTTAGTCTTCA TTTATATAATTAATA TERM 3952 2959092 - 2959071 - T 100 -11.7 -4.72277 | opp_overlap 2959067 2959063 2959061 2959071, overlap 2959067 2959061 AACAATATAAATAAA GACTAACAC AGCT GTGTTAGTC TTCATTTATATAATT TERM 3953 2959071 - 2959092 + T 95 -11.7 -3.66968 | opp_overlap 2959071 2959067 2959061, overlap 2959067 2959063 2959061 AACAATATAAATAAA GACTAACAC AGCT GTGTTAGTC TTCATTTATATAATT CPE2584 2960785 - 2959142 - | hydroxylamine reductase TERM 3954 2960910 - 2960925 + H 72 -7.6 -3.49176 | opp_overlap 2960908, overlap 2960908 2960899 GTTTTTAATTAACTC GGTAAC TAAA GTTACC TATTTAATAAATTTA CPE2585 2961168 - 2962445 + | nucleoside recognition domain protein TERM 3955 2962480 - 2962450 - T 93 -11.4 -3.3422 | opp_overlap 2962455, overlap 2962455 TATTGTTCTAAAAAG TAAAAGAGATTGTT TAA AACAATCTCTTTTT TATTTATCTTGGATT TERM 3956 2962455 - 2962475 + T 100 -11.3 -5.7827 | opp_overlap 2962455 2962450 TTCTAAAAAGTAAAA GAGATTGTT TAA AACAATCTC TTTTTTATTTATCTT TERM 3957 2962475 - 2962455 - T 100 -11.3 -4.77757 | opp_overlap 2962455, overlap 2962450 TTCTAAAAAGTAAAA GAGATTGTT TAA AACAATCTC TTTTTTATTTATCTT CPE2586 2963272 - 2962484 - | hypothetical protein CPE2587 2963405 - 2963989 + | maltose transacetylase CPE2588 2964045 - 2964518 + | methionine sulfoxide reductase A CPE2589 2966004 - 2964520 - | site specific DNA-methyltransferase TERM 3958 2964628 - 2964640 + g 72 -4.9 -4.99947 | ATGACATAACTCAGT TTCTA TAC TAGAA TTTTGTTTCCTTAAC TERM 3959 2965418 - 2965407 - G 75 -5.8 -4.77036 | CTTGATTATGAAAAA GTCC TCTA GGAC ACATGGTTATTTCAT TERM 3960 2966094 - 2966126 + r 95 -9.4 -4.80453 | opp_overlap 2966099, overlap 2966099 AATCTCTTATAAAAC AAAAAGAGTAAAGA CTTAA TCTTTACTCTTTTC TTTATTTTATAATCC TERM 3961 2966121 - 2966099 - R 100 -10 -5.54907 | opp_overlap 2966099 2966094 CTTATAAAACAAAAA GAGTAAAGAC TTA ATCTTTACTC TTTTCTTTATTTTAT TERM 3962 2966099 - 2966121 + r 100 -9.3 -5.28281 | opp_overlap 2966099, overlap 2966094 CTTATAAAACAAAAA GAGTAAAGA CTTAA TCTTTACTC TTTTCTTTATTTTAT CPE2590 2968289 - 2966133 - | phage infection protein TERM 3963 2966600 - 2966625 + g 77 -7.1 -4.3295 | gap 1, opp_overlap 2966600 2966598 2966595, overlap 2966595 TCAAGAATAATAACA TCTTA-CCAAAA TGC TTTTGGATAAGA TTTAATTTTGTTCCA TERM 3964 2967156 - 2967171 + g 81 -6.2 -5.04868 | TGTAGAAACAGACTC TATAGC ATTA GCTATA TTTTCTTTACTTTCA CPE2591 2970477 - 2968312 - | phage infection protein TERM 3965 2970793 - 2970818 + r 81 -7.7 -4.40184 | opp_overlap 2970796, overlap 2970796 TAAATTCCAAAATAA AAAGGAACATA CTAA TATGTTCCTTA TTTCTATTTAATTAA TERM 3966 2970815 - 2970796 - R 100 -9.4 -5.46706 | opp_overlap 2970796 2970793 ATTCCAAAATAAAAA GGAACATA CTAA TATGTTCC TTATTTCTATTTAAT TERM 3967 2970796 - 2970815 + r 89 -9.4 -4.28747 | opp_overlap 2970796, overlap 2970793 ATTCCAAAATAAAAA GGAACATA CTAA TATGTTCC TTATTTCTATTTAAT phnA 2971168 - 2970830 - | phnA family protein CPE2593 2972188 - 2971382 - | hypothetical protein TERM 3968 2971525 - 2971539 + g 75 -4.3 -5.20328 | TTTCATATGTATTAT TAGGA TTATC TCCTA TTTCTTTTTTTACAA TERM 3969 2972321 - 2972293 - R 100 -9.8 -5.07107 | opp_overlap 2972293 2972297 TAAATTTGTAAAAAA TAAAGGATTACT TAATT AGTAATCCTCTA TTTTTAAGCCTTTAC TERM 3970 2972293 - 2972321 + r 83 -7.6 -4.64657 | opp_overlap 2972293, overlap 2972297 TAAATTTGTAAAAAA TAAAGGATTACT TAATT AGTAATCCTCTA TTTTTAAGCCTTTAC TERM 3971 2972297 - 2972317 + r 75 -8.4 -3.54256 | opp_overlap 2972293, overlap 2972293 TTTGTAAAAAATAAA GGATTACT TAATT AGTAATCC TCTATTTTTAAGCCT CPE2594 2973356 - 2972325 - | hypothetical protein TERM 3972 2973472 - 2973445 - R 100 -13 -5.85737 | opp_overlap 2973445 ATATTAATAAAAAAA TAGGATACTTTT AAAT AAAAGTATCCTA TTTTTTATTATCTTA TERM 3973 2973445 - 2973472 + r 100 -13 -5.64304 | opp_overlap 2973445 ATATTAATAAAAAAA TAGGATACTTTT AAAT AAAAGTATCCTA TTTTTTATTATCTTA CPE2595 2974913 - 2973480 - | potassium/proton antiporter TERM 3974 2975147 - 2975098 - R 100 -13.5 -5.15969 | gap 1, opp_overlap 2975110 2975145, overlap 2975099 2975110 2975145 GTGTAATTCAAAAAA TCA-TAATAAAAACTGCTATTAAT TAA ATTAATAGCAGTTTTTATTAATTA AAATATTTAAATTTA TERM 3975 2975145 - 2975099 - R 100 -14.2 -3.68859 | opp_overlap 2975110, overlap 2975098 2975110 TGTAATTCAAAAAAT CATAATAAAAACTGCTATTAAT TAA ATTAATAGCAGTTTTTATTAAT TAAAATATTTAAATT TERM 3976 2975134 - 2975110 - R 100 -13.1 -5.25772 | opp_overlap 2975110, overlap 2975099 2975098 AAATCATAATAAAAA CTGCTATTAAT TAA ATTAATAGCAG TTTTTATTAATTAAA TERM 3977 2975110 - 2975134 + r 100 -13.1 -5.1963 | opp_overlap 2975110 2975099 2975098 AAATCATAATAAAAA CTGCTATTAAT TAA ATTAATAGCAG TTTTTATTAATTAAA CPE2596 2975534 - 2975166 - | hypothetical protein TERM 3978 2975721 - 2975756 + H 77 -6.6 -4.65916 | gap 1, opp_overlap 2975729 2975749, overlap 2975724 AACAAATTTAAGATC TAT-TTAAATTCATATA ACC TGTATGAATTTAATATA TTTTATTAAGATACA TERM 3979 2975724 - 2975752 + H 89 -9.9 -3.55261 | opp_overlap 2975729 2975749, overlap 2975721 AAATTTAAGATCTAT TTAAATTCATATA ACC TGTATGAATTTAA TATATTTTATTAAGA TERM 3980 2976302 - 2976276 - g 72 -2.5 -5.46706 | opp_overlap 2976276 2976279, overlap 2976270 ATCCCAAAATAAAAA TTTTAAAAAAT GGTGT ATTTTTTATAA TATTTCATTAATATA CPE2597 2976070 - 2976468 + | hypothetical protein TERM 3981 2976497 - 2976531 + F 85 -10.2 -3.24245 | opp_overlap 2976499, overlap 2976499 2976502 ATATATTTAAATAAA AATAAGGAAGAAGCTA AAT TAACTTCTTCCTTATA TTAAATTATAAATAA TERM 3982 2976499 - 2976529 + F 95 -12.8 -3.18321 | opp_overlap 2976499, overlap 2976497 2976502 ATATTTAAATAAAAA TAAGGAAGAAGCTA AAT TAACTTCTTCCTTA TATTAAATTATAAAT TERM 3983 2976529 - 2976499 - f 100 -15 -5.31519 | opp_overlap 2976499 2976497 2976502 ATATTTAAATAAAAA TAAGGAAGAAGCTA AAT TAACTTCTTCCTTA TATTAAATTATAAAT TERM 3984 2976502 - 2976526 + F 90 -10.1 -3.72757 | opp_overlap 2976499, overlap 2976499 2976497 TTTAAATAAAAATAA GGAAGAAGCTA AAT TAACTTCTTCC TTATATTAAATTATA CPE2598 2976653 - 2977543 + | oxidoreductase TERM 3985 2977556 - 2977595 + T 90 -12.5 -2.98988 | opp_overlap 2977561, overlap 2977561 TAAAAACTTTATATA AAAAATAAGCCTGTTTT AAATAA AAAACAGGCTTATTTTA ATTCTATTTATTATG TERM 3986 2977561 - 2977590 + T 100 -12.4 -4.58724 | opp_overlap 2977561, overlap 2977556 ACTTTATATAAAAAA TAAGCCTGTTTT AAATAA AAAACAGGCTTA TTTTAATTCTATTTA TERM 3987 2977590 - 2977561 - T 100 -12.4 -5.37043 | opp_overlap 2977561 2977556 ACTTTATATAAAAAA TAAGCCTGTTTT AAATAA AAAACAGGCTTA TTTTAATTCTATTTA TERM 3988 2977688 - 2977667 - T 100 -11.7 -5.36441 | TTTTTACATAAAAAA GGTTGTAGT TTAA ACTACAACC TATAACACTCTAAAA CPE2599 2977856 - 2977704 - | hypothetical protein CPE2600 2978706 - 2978227 - | SPOUT methyltransferase superfamily protein TERM 3989 2978942 - 2978913 - R 100 -10.2 -5.4251 | opp_overlap 2978913 TTTATATATAAAAAA GACTATGCAAGA TATAAT TCTTACATAGTC TTTTAAACTTTTATA TERM 3990 2978913 - 2978942 + r 78 -8 -4.29656 | opp_overlap 2978913 TTTATATATAAAAAA GACTATGCAAGA TATAAT TCTTACATAGTC TTTTAAACTTTTATA CPE2601 2979324 - 2978953 - | hypothetical protein TERM 3991 2979544 - 2979519 - R 93 -7 -5.65177 | opp_overlap 2979519 2979530 AGATTTATAAAAAAA GTAAGAACAT TTTTAC ATGTCCTTAC TTGTAAATTTTAATA CPE2602 2980195 - 2979554 - | hypothetical protein TERM 3992 2979674 - 2979690 + g 83 -6.6 -5.02606 | ATCCATGCAATTTCC CACCTT AGCAC AAGGTG TTTTCTTATTTAATC TERM 3993 2980288 - 2980268 - R 100 -12.7 -5.43487 | opp_overlap 2980270 AAAGCACATAAAAAA TAGGTAGAC TAA GTCTACCTA TTCAAAAAATTAATT TERM 3994 2980270 - 2980286 + r 87 -10.9 -3.03159 | opp_overlap 2980268 AGCACATAAAAAATA GGTAGAC TAA GTCTACC TATTCAAAAAATTAA CPE2603 2980802 - 2980302 - | hypothetical protein CPE2604 2981499 - 2980945 - | hypothetical protein CPE2605 2982306 - 2981515 - | metallo-beta-lactamase family protein murA 2983582 - 2982329 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase CPE2607 2983922 - 2984467 + | hypothetical protein CPE2608 2984662 - 2985141 + | hypothetical protein TERM 3995 2985131 - 2985155 + F 100 -10.9 -6.02919 | opp_overlap 2985131 2985133 ATGATTGTTGTAAGA TAGCTCTCTAA AAT TTAGAGAGTTA TTTTTTTATTTGTGG TERM 3996 2985155 - 2985131 - f 74 -8.7 -3.0263 | opp_overlap 2985131, overlap 2985133 ATGATTGTTGTAAGA TAGCTCTCTAA AAT TTAGAGAGTTA TTTTTTTATTTGTGG CPE2609 2985197 - 2985628 + | hypothetical protein TERM 3997 2985645 - 2985688 + F 83 -7.8 -4.57063 | gap 1, opp_overlap 2985642 2985645 2985647 2985669, overlap 2985669 ACATTGTCAAAATCA TACTCCCAT-TCATATATTAT AAA ATAATAAATAATATGGGAGTA TTTATTATGTTTTCA TERM 3998 2985688 - 2985645 - f 82 -10 -3.09272 | gap 1, opp_overlap 2985645 2985669, overlap 2985642 2985647 2985669 ACATTGTCAAAATCA TACTCCCAT-TCATATATTAT AAA ATAATAAATAATATGGGAGTA TTTATTATGTTTTCA TERM 3999 2985686 - 2985647 - f 71 -8.2 -3.10091 | gap 1, opp_overlap 2985645 2985669, overlap 2985645 2985642 2985669 ATTGTCAAAATCATA CTCCCAT-TCATATATTAT AAA ATAATAAATAATATGGGAG TATTTATTATGTTTT aprX 2985695 - 2986891 + | subtilase family protein CPE2611 2987946 - 2986894 - | peptidase, M23/M37 family TERM 4000 2987175 - 2987144 - G 79 -9.4 -3.46117 | opp_overlap 2987144 ACTACACCATCACAA GCTGCTCCTATTGG TGTT CCACTAGGAACCGC TATATCAACTCCTCT TERM 4001 2987598 - 2987608 + g 72 -4 -5.15381 | TTAAATCTTTAGATT GAAT CAT ATTC TTTTTTAAATCTATT TERM 4002 2987900 - 2987886 - G 75 -4.4 -5.18371 | overlap 2987893 CTGTACAAAATAAAA TAATTA AGG TAATTA GAAAAACTTTAATAA TERM 4003 2987923 - 2987901 - G 71 -8.6 -2.80398 | opp_overlap 2987907, overlap 2987893 2987907 TAATTAAGGTAATTA GAAAAACTTT AAT AAAGTTTCTC CCCTCACCCTCTGAA TERM 4004 2987917 - 2987907 - G 70 -4 -4.98857 | opp_overlap 2987907, overlap 2987901 2987893 AGGTAATTAGAAAAA CTTT AAT AAAG TTTCTCCCCTCACCC TERM 4005 2988212 - 2988200 - g 72 -4.1 -5.0538 | TTTTATGTTAAAAAA CTCAG CCA CTAAG TTTACTCCTGTTAGT dnaD 2988177 - 2989178 + | chromosome replication initiation protein TERM 4006 2990146 - 2990134 - g 76 -2.7 -5.52807 | overlap 2990124 AAGAATAAAGAAAAA TCTTC AAA AAAGA AAAAATACACCTTAT dnaC 2989175 - 2990170 + | DNA replication protein DnaC TERM 4007 2990151 - 2990184 + T 100 -9.8 -5.09895 | opp_overlap 2990152, overlap 2990152 TTCAAAAAAGAAAAA ATACACCTTATCTT ACTTAA AAGATAAGGTGTAC TTTTTTGCATAAATA TERM 4008 2990183 - 2990152 - T 100 -13.3 -6.04324 | opp_overlap 2990151 2990152 TCAAAAAAGAAAAAA TACACCTTATCTT ACTTAA AAGATAAGGTGTA CTTTTTTGCATAAAT TERM 4009 2990152 - 2990183 + T 100 -13.3 -3.65214 | opp_overlap 2990152, overlap 2990151 TCAAAAAAGAAAAAA TACACCTTATCTT ACTTAA AAGATAAGGTGTA CTTTTTTGCATAAAT TERM 4010 2990241 - 2990257 + T 86 -9.5 -3.9281 | opp_overlap 2990241 AGAATAAAAAAAAAA CTTCAGT TTA ACTGAAG TTCTTTGGAGCTGAT TERM 4011 2990257 - 2990241 - T 100 -9.5 -6.62203 | opp_overlap 2990241 AGAATAAAAAAAAAA CTTCAGT TTA ACTGAAG TTCTTTGGAGCTGAT TERM 4012 2990463 - 2990479 + T 72 -8.7 -2.62616 | TCGAACCTGTGACCC CCTGCTT GTA AGGCAGG TGCTCTCCCAGCTGA TERM 4013 2990716 - 2990732 + T 72 -8.7 -2.62616 | TCGAACCTGTGACCC CCTGCTT GTA AGGCAGG TGCTCTCCCAGCTGA TERM 4014 2990970 - 2990986 + T 72 -8.7 -2.62616 | TCGAACCTGTGACCC CCTGCTT GTA AGGCAGG TGCTCTCCCAGCTGA CPE2614 2991857 - 2991273 - | hypothetical protein TERM 4015 2991732 - 2991742 + g 72 -4 -5.06816 | TAATTCTCCCTCATT CATT TTA AATG TTTTTATTCCAGAAT CPE2615 2992054 - 2993250 + | hypothetical protein TERM 4016 2993302 - 2993323 + T 70 -3.1 -5.28481 | opp_overlap 2993302 TGTACCCTTCAGTAA TATATTTTC CATG GATAATATA TTTTTTAATTAAGTA TERM 4017 2993411 - 2993359 - T 95 -13 -3.32202 | opp_overlap 2993359 2993364 2993404, overlap 2993364 TATTTTTATATAATA CAAAACCCTTGGTATAACTAGG CTACAACCT CCTAGCCATACCGAGGGTTTTA TTACTTTTAAAACTC TERM 4018 2993359 - 2993411 + T 76 -8.6 -3.67622 | opp_overlap 2993359 2993364, overlap 2993364 2993404 TATTTTTATATAATA CAAAACCCTTGGTATAACTAGG CTACAACCT CCTAGCCATACCGAGGGTTTTA TTACTTTTAAAACTC TERM 4019 2993364 - 2993406 + T 88 -8.5 -4.89562 | opp_overlap 2993359 2993364, overlap 2993359 2993404 TTATATAATACAAAA CCCTTGGTATAACTAGG CTACAACCT CCTAGCCATACCGAGGG TTTTATTACTTTTAA TERM 4020 2993406 - 2993364 - T 100 -10.7 -4.76963 | opp_overlap 2993364 2993359 2993404, overlap 2993359 TTATATAATACAAAA CCCTTGGTATAACTAGG CTACAACCT CCTAGCCATACCGAGGG TTTTATTACTTTTAA CPE2616 2994176 - 2993418 - | hypothetical protein CPE2617 2994939 - 2994199 - | acyl-ACP thioesterase family protein TERM 4021 2994582 - 2994593 + g 85 -2.2 -6.08342 | CGTCGCTTATTCTAG CTGG TCTT CTAG TTTTTTTGTTTATTA TERM 4022 2995036 - 2994992 - R 79 -9.8 -2.74515 | gap 1, opp_overlap 2994995 2995000, overlap 2995000 AAATACCTTTCAAAC TAAA-AAAACACCACTAAA CTAGGTGT TTTAGTGGTGTTTTCTTTA TAAATATATCAATAC TERM 4023 2994995 - 2995032 + r 81 -8.7 -3.96531 | opp_overlap 2994992 2995000, overlap 2995000 TACCTTTCAAACTAA AAAAACACCACTAAA CTAGGTGT TTTAGTGGTGTTTTC TTTATAAATATATCA TERM 4024 2995027 - 2995000 - R 100 -8.6 -5.72207 | opp_overlap 2995000 2994995, overlap 2994992 TTCAAACTAAAAAAA CACCACTAAA CTAGGTGT TTTAGTGGTG TTTTCTTTATAAATA TERM 4025 2995000 - 2995027 + r 91 -8.6 -5.0065 | opp_overlap 2994992 2995000, overlap 2994995 TTCAAACTAAAAAAA CACCACTAAA CTAGGTGT TTTAGTGGTG TTTTCTTTATAAATA CPE2618 2995614 - 2995072 - | hypothetical protein TERM 4026 2995176 - 2995197 + g 76 -5.3 -5.15969 | gap 1, overlap 2995177 CATCTAAGTTTAATT G-TTTAGCTA AAG TAGCTAAATC TTTTTTACCTTGGCA TERM 4027 2995177 - 2995195 + g 84 -9 -4.20888 | overlap 2995176 ATCTAAGTTTAATTG TTTAGCTA AAG TAGCTAAA TCTTTTTTACCTTGG TERM 4028 2995876 - 2995846 - R 83 -7 -5.00846 | opp_overlap 2995846 TAAATAGTACAAAAA TAAGAAGTACCTAT TAA AAAAGCACTTCTTA TTTTAAACAGAGATT CPE2619 2996087 - 2995896 - | hypothetical protein CPE2620 2996436 - 2996197 - | hypothetical protein CPE2621 2996677 - 2996378 - | MutT/nudix family protein TERM 4029 2996459 - 2996444 - GR 70 -6.2 -4.12133 | GTAAACATTAAACAA GGTTAA ACTC TTAACC CTAAGCCCCACTTCT TERM 4030 2996749 - 2996776 + r 100 -13 -4.17425 | opp_overlap 2996749 CCCTAAAATAAAAAA TAGCTTAAGATT AAAT AATCTTAAGCTA TTTTAAACTAATTAT TERM 4031 2996776 - 2996749 - R 100 -13 -5.79595 | opp_overlap 2996749 CCCTAAAATAAAAAA TAGCTTAAGATT AAAT AATCTTAAGCTA TTTTAAACTAATTAT purA 2998091 - 2996805 - | adenylosuccinate synthetase sdhB 2998572 - 2999252 + | L-serine dehydratase beta subunit sdhA 2999253 - 3000134 + | L-serine dehydratase alpha subunit TERM 4032 3000146 - 3000171 + F 100 -9.9 -5.2853 | opp_overlap 3000149 ATAATTCTTTTTTAA TGAGCATATGT AATT ATATATGCTCA TTTTATTTTTAAATA CPE2625 3000370 - 3001542 + | tagatose-6-phosphate aldose/ketose isomerase gatY 3001562 - 3002419 + | tagatose-bisphosphate aldolase TERM 4033 3002437 - 3002471 + T 75 -7.3 -4.35663 | opp_overlap 3002428 3002442, overlap 3002442 ATTTAATTTTATATA TAAAAGAGACATCAA TTTTT TTGATGTCTCTTTAC TTTATTAATCTTCTT TERM 4034 3002442 - 3002466 + T 100 -11.6 -4.22748 | opp_overlap 3002442, overlap 3002437 ATTTTATATATAAAA GAGACATCAA TTTTT TTGATGTCTC TTTACTTTATTAATC TERM 4035 3002466 - 3002442 - T 100 -11.6 -4.61199 | opp_overlap 3002442 3002437 ATTTTATATATAAAA GAGACATCAA TTTTT TTGATGTCTC TTTACTTTATTAATC CPE2627 3003201 - 3002476 - | GntR family transcriptional regulator TERM 4036 3003312 - 3003289 - R 79 -8.2 -4.17701 | opp_overlap 3003287 3003289, overlap 3003282 TCTATAAAGCATAAA CTCACAGTAT ATAC AAACTGTGAG TCTTTAAAAATAATT TERM 4037 3003289 - 3003312 + r 74 -8.2 -3.37259 | opp_overlap 3003282 3003289, overlap 3003287 TCTATAAAGCATAAA CTCACAGTAT ATAC AAACTGTGAG TCTTTAAAAATAATT CPE2628 3003601 - 3003338 - | hypothetical protein CPE2629 3004022 - 3003618 - | PTS system protein CPE2630 3005001 - 3004195 - | mannose permease IIm CPE2631 3005798 - 3005001 - | PTS system protein CPE2632 3006327 - 3005839 - | PTS system protein TERM 4038 3006452 - 3006434 - R 100 -11.8 -5.72207 | opp_overlap 3006434 3006434 3006429 TTTAAACGAAAAAAA CTCCTAGA AAA TCTAGGAG TTCTTGTAGGAGTTT TERM 4039 3006434 - 3006452 + r 95 -11.8 -3.81022 | opp_overlap 3006434, overlap 3006429 3006434 TTTAAACGAAAAAAA CTCCTAGA AAA TCTAGGAG TTCTTGTAGGAGTTT proC 3007405 - 3006605 - | pyrroline-5-carboxylate reductase TERM 4040 3007051 - 3007062 + g 78 -3 -5.56573 | CTGGAGTATTTGGCA TAGT CTTA ACTA TTTTTGTTTCTTTCT TERM 4041 3007574 - 3007549 - R 95 -10.5 -4.36716 | opp_overlap 3007549, overlap 3007544 AATAATAAAATTAAA GGGCATATCAG CATT CTGATACACCC TAAATTTATTAAACA dnaC 3008917 - 3007583 - | replicative DNA helicase TERM 4042 3008998 - 3008970 - R 73 -6.9 -4.35461 | opp_overlap 3008970 CTAATATCATTAAAA GTTTATAAGATAT TTT AAACCTTATAAAC TTTTCTTAAACTTTT TERM 4043 3009334 - 3009293 - R 90 -9.8 -3.78026 | opp_overlap 3009298 3009302, overlap 3009298 3009305 GGTAAATTTAAAAGA CAAAATAAAAAACCTAGA AATAAA TCTAGGTTCTTTATTTTT AATTAAAAGCAATTT TERM 4044 3009298 - 3009329 + r 86 -7.5 -4.8622 | opp_overlap 3009293 3009298 3009305, overlap 3009302 ATTTAAAAGACAAAA TAAAAAACCTAGA AATAAA TCTAGGTTCTTTA TTTTTAATTAAAAGC TERM 4045 3009329 - 3009298 - R 95 -9.7 -4.90471 | opp_overlap 3009298 3009302, overlap 3009293 3009305 ATTTAAAAGACAAAA TAAAAAACCTAGA AATAAA TCTAGGTTCTTTA TTTTTAATTAAAAGC TERM 4046 3009322 - 3009305 - R 90 -5.6 -5.8901 | opp_overlap 3009302 3009298, overlap 3009298 3009293 AGACAAAATAAAAAA CCTAGA AATAAA TCTAGG TTCTTTATTTTTAAT lon 3011192 - 3009333 - | ATP-dependent proteinase La rplI 3011693 - 3011247 - | 50S ribosomal protein L9 CPE2637 3013653 - 3011695 - | DHH family protein TERM 4047 3012118 - 3012106 - G 76 -6.3 -4.58283 | TAATCTTCTTAAAAA TGAAG CTG CTTCA AAGGTTCTTACACCG TERM 4048 3013356 - 3013370 + g 74 -7.2 -3.91716 | opp_overlap 3013355 3013358, overlap 3013341 TAAGCTTACTAAACT TATGGT TAT ACCATA TTATTTCACCAGTAG CPE2638 3014681 - 3013686 - | hypothetical protein TERM 4049 3014048 - 3014031 - G 72 -4.1 -5.0133 | opp_overlap 3014019, overlap 3014019 TATTGGGTTAAAAAA CCACTTT GAAA AAGGTGG TAAGCTGTTTAATTT CPE2639 3015016 - 3014699 - | hypothetical protein TERM 4050 3015270 - 3015288 + r 91 -10.3 -3.55801 | opp_overlap 3015270, overlap 3015287 TATATAATAAAAAAA CCCCTGA AAATA TCAGGGG TTTGCAACCATTACT TERM 4051 3015288 - 3015270 - R 100 -10.3 -5.9218 | opp_overlap 3015270 3015287 TATATAATAAAAAAA CCCCTGA AAATA TCAGGGG TTTGCAACCATTACT rpsR 3015541 - 3015299 - | 30S ribosomal protein S18 CPE2641 3016024 - 3015572 - | phage-related single-strand DNA-binding protein rpsF 3016328 - 3016038 - | 30S ribosomal protein S6 TERM 4052 3016422 - 3016404 - R 72 -6 -4.43012 | opp_overlap 3016404 3016407 ATTCTAACATTAAAA GAAGGTTA TTG CAACCCTC TTTATTAATGTAAAC CPE2643 3016681 - 3016469 - | hypothetical protein TERM 4053 3016500 - 3016511 + g 71 -3 -5.19261 | TCCTCTGGAGCATTT GATT TTAT AATC TTTTTTACTCCCTTT CPE2644 3017578 - 3016718 - | mechanosensitive ion channel family protein CPE2645 3017844 - 3017611 - | hypothetical protein CPE2646 3018004 - 3018651 + | hypothetical protein TERM 4054 3018784 - 3018807 + G 83 -11.1 -2.9356 | overlap 3018786 GAGGATCCTCATCTA CAGCTCTAC AAAGTA GTAGAGCTG TCTATGAATGTAGAT TERM 4055 3018874 - 3018856 - g 83 -9 -4.09739 | opp_overlap 3018838 TTAATTTTCCTAAAA GTGAAAAT GTT ATTTTCAC CAATAATATTACAAC nifS 3018663 - 3019823 + | cysteine desulfurase family protein TERM 4056 3019895 - 3019866 - g 73 -3.7 -5.2696 | opp_overlap 3019866 TCAAAAGTGAAAAAA TAAGTGTGTTT TTTATTTT ATACACACTTA TATTTTTTACGTTTT TERM 4057 3020704 - 3020716 + G 73 -3.5 -5.33131 | AGCTATTTCATTATT TATAT TGT ATATA TTTATTTTTTTATTA CPE2648 3019835 - 3020899 + | sporulation integral membrane protein YtvI CPE2649 3020949 - 3021539 + | putative sporulation protein YyaC TERM 4058 3021594 - 3021609 + T 76 -6.2 -4.86731 | opp_overlap 3021594, overlap 3021589 CCCTATTTATTGAAA TGTTTC ACGT GAAACA TTTTGTTTAACACAA TERM 4059 3021674 - 3021628 - T 100 -14.3 -5.0916 | gap 1, opp_overlap 3021628 TGTTTAACACAAAAA TAGGTTATATTAAAATCAACAA GAAA TCGTTG-TTTTAATATAACCTA TTTTTATTCTTAAAC TERM 4060 3021628 - 3021674 + T 100 -12.1 -5.29445 | gap 1, opp_overlap 3021628 TGTTTAACACAAAAA TAGGTTATATTAAAATCAACAA GAAA TCGTTG-TTTTAATATAACCTA TTTTTATTCTTAAAC CPE2650 3022187 - 3021690 - | hypothetical protein TERM 4061 3022209 - 3022242 + r 93 -9.9 -4.04719 | opp_overlap 3022218 3022232, overlap 3022211 3022218 3022232 TATCATCCCTTCGTG TTTTTAAAATGTTTC ACGT GAAACATTTTAAATA TTTATAATGTCTAGT TERM 4062 3022211 - 3022240 + r 95 -12.5 -3.61175 | opp_overlap 3022218 3022232, overlap 3022209 3022218 3022232 TCATCCCTTCGTGTT TTTAAAATGTTTC ACGT GAAACATTTTAAA TATTTATAATGTCTA TERM 4063 3022218 - 3022233 + r 70 -6.2 -4.33907 | opp_overlap 3022218 3022232, overlap 3022211 3022209 3022232 TTCGTGTTTTTAAAA TGTTTC ACGT GAAACA TTTTAAATATTTATA spo0J 3023096 - 3022236 - | stage 0 sporulation protein J soj 3023870 - 3023097 - | sporulation initiation inhibitor protein soj TERM 4064 3023998 - 3024025 + r 100 -14.4 -4.9218 | opp_overlap 3023998 TAAAAAATGAAAAAA TAGGAATGTTTC ACGT GAAACATTCCTA TTTTTATGGTCAATA TERM 4065 3024025 - 3023998 - R 100 -14.4 -5.59502 | opp_overlap 3023998 TAAAAAATGAAAAAA TAGGAATGTTTC ACGT GAAACATTCCTA TTTTTATGGTCAATA gidB 3024839 - 3024120 - | glucose-inhibited division protein B TERM 4066 3024936 - 3024907 - R 74 -5.1 -5.14563 | opp_overlap 3024888 3024912 3024935, overlap 3024887 3024888 3024912 3024931 TTTTTTACTAAAAAA CTAAAGTTATCCA CATG TGGATAACTTTTT AAAAGGGGTAAAACA TERM 4067 3024912 - 3024931 + r 93 -9.4 -4.57073 | opp_overlap 3024907 3024912 TACTAAAAAACTAAA GTTATCCA CATG TGGATAAC TTTTTAAAAGGGGTA TERM 4068 3024931 - 3024912 - R 93 -9.4 -4.45175 | opp_overlap 3024912, overlap 3024907 TACTAAAAAACTAAA GTTATCCA CATG TGGATAAC TTTTTAAAAGGGGTA gidA 3026908 - 3025016 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 4069 3026299 - 3026310 + g 70 -5.8 -4.30441 | TCTTATTGATTCTAG CTGG AGTA CCAG TTTTAAATCTTCTAA trmE 3028299 - 3026923 - | tRNA modification GTPase TrmE TERM 4070 3027241 - 3027265 + g 75 -7.2 -4.1399 | opp_overlap 3027245 TATTTTATTTTCTAA GTTATCCACA ATTTC TGAGGATAAC TTTCTATCTAAATCA TERM 4071 3028487 - 3028515 + r 100 -14.9 -5.24449 | opp_overlap 3028487 TACTTGATAAAAAAA TAAGGTGAAAATA TAA TATTTTCACCTTA TTTTTTAAATTTATC TERM 4072 3028515 - 3028487 - R 100 -14.9 -5.626 | opp_overlap 3028487 TACTTGATAAAAAAA TAAGGTGAAAATA TAA TATTTTCACCTTA TTTTTTAAATTTATC TERM 4073 3028609 - 3028647 + r 100 -13.4 -4.02108 | opp_overlap 3028579 3028589 3028619, overlap 3028619 CTACAGTTTATTGTG GATAAAAAAAGGAAAGCT TTA AGCTTTCCTTTTTATTTC TTTAATTCTACTACA TERM 4074 3028637 - 3028619 - R 100 -11.8 -5.60993 | opp_overlap 3028609 3028619 TTGTGGATAAAAAAA GGAAAGCT TTA AGCTTTCC TTTTTATTTCTTTAA TERM 4075 3028619 - 3028637 + r 100 -11.8 -5.5454 | opp_overlap 3028619, overlap 3028609 TTGTGGATAAAAAAA GGAAAGCT TTA AGCTTTCC TTTTTATTTCTTTAA jag 3029264 - 3028641 - | SpoIIIJ-associated protein spoIIIJ 3030022 - 3029306 - | putative inner membrane protein translocase component YidC CPE2658 3030265 - 3030056 - | hypothetical protein rnpA 3030614 - 3030237 - | ribonuclease P TERM 4076 3030673 - 3030657 - R 100 -10.1 -4.85599 | opp_overlap 3030656 3030649 3030657 TTTAGTGCAGAAAAA GGCCACA AAA TGCGGCC CTTATGCTGTTAATC rpmH 3030809 - 3030675 - | 50S ribosomal protein L34