TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.549873 %AT, 1282416 nt, 7628 terms. Intergenic: 0.574086 %AT, H2T: 210287 nt, 702 terms; T2T: 60371 nt, 537 terms; H2H: 74869 nt, 362 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|206895078|ref|NC_011295.1| Coprothermobacter proteolyticus DSM 5265, complete genome (length 1424912) COPRO5265_0001 7 - 774 + | nitrilase 2, putative TERM 1 1282 - 1294 + G 79 -4.1 -5.26316 | overlap 1279 CCTAACCCCTTGTAT GTACT CAT AGTGC TTTTTTCTGCGCTGG COPRO5265_0002 964 - 1782 + | caax amino protease family COPRO5265_0003 1867 - 2502 + | SAM-dependent methyltransferase, UbiE/COQ5 family TERM 2 2892 - 2877 - g 79 -4 -5.11033 | gap 1 TATAATTGTAAAAAA CTGG-TC GTA GATCCAG TAATGGTCGCCCAAA TERM 3 3188 - 3178 - g 79 -4 -5.24989 | TCACACACGAAAAAA TAGA TAC TCTA GACCATCATGGCACA thiD 2592 - 3380 + | phosphomethylpyrimidine kinase TERM 4 3504 - 3492 - g 73 -7.7 -4.03078 | overlap 3485 TTATCACATGACAAA CATGG TTG CCATG GCAGAGCAAGCACAC thiM 3409 - 4221 + | hydroxyethylthiazole kinase thiE 4226 - 4861 + | thiamine-phosphate pyrophosphorylase nrdD 4975 - 7065 + | anaerobic ribonucleoside-triphosphate reductase COPRO5265_0008 7083 - 7775 + | anaerobic ribonucleoside-triphosphate reductase activating protein COPRO5265_0009 7976 - 8728 + | ABC transporter ATP-binding protein TERM 5 9673 - 9661 - gT 76 -7.7 -4.10144 | opp_overlap 9660 9661 CTAATACAACAAGAA GCCAT ACC ATGGC GCTTTTTTCTAAAGA COPRO5265_0010 8688 - 10400 + | hypothetical protein COPRO5265_0011 10565 - 10428 - | hypothetical protein TERM 6 10592 - 10625 + H 100 -13.9 -5.68438 | TCGGAGGTACCCGAA GGGGCGTTCTCTATA TGCT TTTTGAGAACGCCCC TTTTTTATTTGGTCA COPRO5265_0012 10683 - 11270 + | vitamin B12 dependent methionine synthase, activation domain protein TERM 7 12015 - 11990 - g 83 -9.1 -4.30719 | opp_overlap 11975 11970, overlap 11975 CCCTTGTATAACAAA GGTGTGCTT ACGTATAA AAGCACACC GGAAGAATTTGCAGT COPRO5265_0013 11267 - 13594 + | 5-methyltetrahydrofolate S-homocysteine methyltransferase COPRO5265_0015 13591 - 14940 + | aspartate kinase COPRO5265_0014 15142 - 14915 - | hypothetical protein TERM 8 15555 - 15591 + GH 89 -11.7 -3.53224 | opp_overlap 15558, overlap 15556 15558 ACCATTGGTTTGGGA ACACGTATCTTTTTGTG TGG CACAGAAGGGTACGTGG TTTGGCCGGGAACTC TERM 9 15556 - 15590 + GH 100 -15.2 -2.71791 | opp_overlap 15558, overlap 15555 15558 CCATTGGTTTGGGAA CACGTATCTTTTTGTG TGG CACAGAAGGGTACGTG GTTTGGCCGGGAACT TERM 10 15558 - 15588 + GH 86 -12 -2.90496 | opp_overlap 15558, overlap 15556 15555 ATTGGTTTGGGAACA CGTATCTTTTTGTG TGG CACAGAAGGGTACG TGGTTTGGCCGGGAA COPRO5265_0016 14937 - 16268 + | inosine-5'-monophosphate dehydrogenase related protein viii COPRO5265_0017 16255 - 17007 + | hypothetical protein COPRO5265_0018 16994 - 17950 + | 5,10-methylenetetrahydrofolate reductase TERM 11 18745 - 18729 - g 76 -2.1 -5.43329 | opp_overlap 18729 AAAAACAAAAGAAAA GGTCAGT ATT ACAGCCC TCATTGACGCCATCA asd 17980 - 19014 + | aspartate-semialdehyde dehydrogenase TERM 12 19059 - 19079 + F 78 -9.7 -3.42078 | opp_overlap 19046 AAGGCATTTCCCGCA CATGCCACA CAT TGTGGCACG TTCTACTAGAATCTG COPRO5265_0020 19186 - 19395 + | hypothetical protein COPRO5265_0021 19383 - 19922 + | RNA polymerase sigma-E factor, putative COPRO5265_0022 20420 - 20289 - | hypothetical protein COPRO5265_0023 19906 - 20667 + | hypothetical protein TERM 13 20882 - 20896 + G 70 -10 -3.05384 | opp_overlap 20882 20880 ACTAGGAGCCAAATA CCGAGA CAT TCTCGG TTACATGCCCCAGGA TERM 14 20896 - 20882 - g 73 -10 -3.42663 | opp_overlap 20882, overlap 20880 ACTAGGAGCCAAATA CCGAGA CAT TCTCGG TTACATGCCCCAGGA COPRO5265_0024 20667 - 21536 + | ABC transporter, ATP-binding protein COPRO5265_0025 21533 - 22711 + | hypothetical protein COPRO5265_0026 22708 - 23544 + | hypothetical protein TERM 15 23880 - 23824 - g 76 -7.4 -4.34993 | gap 1, overlap 23873 GAAACAGTAAAACAA CTTGGACCTTACA-GCGTCATAGCA CCTGGCAT TGCCATGCCACATGCAAGGCCCGAG GCCGGAGTTATCAAG ptsN 23671 - 24123 + | PtsN protein TERM 16 24695 - 24661 - g 71 -3.5 -4.90217 | overlap 24662 TAAATACATGAAAAA GGTGACCAAATCTGA TGACG TCGGATATGGCCACA CCTCCTCCAGTGTTG COPRO5265_0028 24140 - 25417 + | putative sugar-specific permease, SgaT/UlaA superfamily sgaB1 25440 - 25739 + | pentitol phosphotransferase enzyme II, B component TERM 17 25808 - 25756 - f 95 -4.7 -5.83226 | opp_overlap 25759 25762, overlap 25759 AAGGCAACAAAAAAA CAAGAAGGCGGGGTCTGGATGTTTC TCC GAATAATCCTTGCTCCGCCTTCTTT ACTTTGATGCGGATG TERM 18 25805 - 25759 - f 84 -6.4 -4.96435 | opp_overlap 25759 25762, overlap 25756 GCAACAAAAAAACAA GAAGGCGGGGTCTGGATGTTTC TCC GAATAATCCTTGCTCCGCCTTC TTTACTTTGATGCGG TERM 19 25759 - 25805 + F 93 -10.8 -4.10552 | opp_overlap 25756 25759, overlap 25762 GCAACAAAAAAACAA GAAGGCGGGGTCTGGATGTTTC TCC GAATAATCCTTGCTCCGCCTTC TTTACTTTGATGCGG TERM 20 25762 - 25802 + F 71 -6.7 -4.17002 | opp_overlap 25759 25756, overlap 25759 ACAAAAAAACAAGAA GGCGGGGTCTGGATGTTTC TCC GAATAATCCTTGCTCCGCC TTCTTTACTTTGATG COPRO5265_0030 26217 - 28316 + | PAS/PAC sensor signal transduction histidine kinase COPRO5265_0031 28328 - 28774 + | response regulator COPRO5265_0032 28775 - 30136 + | sensory box protein COPRO5265_0033 30397 - 30290 - | hypothetical protein TERM 21 31057 - 31046 - g 72 -5.8 -4.44046 | CGCATGGGAAAGAAA CGCA TCAT TGCG GAAACTGGTGCTGGG TERM 22 31403 - 31391 - g 82 -7.7 -4.6856 | overlap 31382 CAAATACTTCAAAAA GAAGG GCG CCTTC CAGACTACGTGCTGG trpB 30731 - 31921 + | tryptophan synthase, beta subunit TERM 23 32194 - 32169 - g 81 -3.3 -5.42862 | overlap 32170 ATACTCTCAAAAAAA GCCATAGAAAA CGGT TTTACTATGGA GAAGTTTTTTCGAGC trpA 31947 - 32771 + | tryptophan synthase, alpha subunit COPRO5265_0036 32878 - 33495 + | dithiol-disulfide isomerase COPRO5265_0037 34484 - 33594 - | putative phosphotriesterase COPRO5265_0038 35776 - 34496 - | hypothetical protein COPRO5265_0039 35837 - 36325 + | hypothetical protein COPRO5265_0040 36326 - 36595 + | hypothetical protein COPRO5265_0041 36885 - 37751 + | tyrosine recombinase XerD COPRO5265_0042 37765 - 38361 + | hypothetical protein TERM 24 38678 - 38666 - g 73 -4.1 -4.77173 | TTCTTAGAAAAGAAA TCGAG CAA CTCAA AAATAACAGTCAATC COPRO5265_0043 38401 - 38949 + | hypothetical protein COPRO5265_0044 39043 - 39192 + | hypothetical protein COPRO5265_0045 39589 - 40935 + | chitin synthase COPRO5265_0046 41310 - 41206 - | hypothetical protein COPRO5265_0047 41493 - 42797 + | RmuC domain protein COPRO5265_0048 42800 - 42937 + | hypothetical protein TERM 25 43010 - 43039 + F 81 -5.1 -5.08255 | gap 1, overlap 43012 ATCCGATTTTCCCTT GCTGGTATTGGCGA AGA TTGC-AATACCAAC TTTTATTTTGGCCGT TERM 26 43418 - 43408 - g 76 -8.2 -4.05033 | overlap 43409 CCGACGGTAGAGAAA CCCG CTG CGGG CGATAAGATTGAGCA TERM 27 43931 - 43914 - g 77 -3.3 -5.093 | opp_overlap 43930 GGTAAAAGAAGAAAA GCCTGCG TTTT CTCAAGC AGTGTCAGCTTCTTA COPRO5265_0049 43210 - 44091 + | prophage LambdaCh01, nuclease domain protein COPRO5265_0050 44218 - 45033 + | ymh, putative COPRO5265_0051 45168 - 45797 + | N-6 DNA methylase fimA 45822 - 46712 + | major pilin protein FimA TERM 28 46988 - 46968 - g 84 -8.4 -4.60255 | overlap 46957 ATAATGGGGTAAAAA TCCCAAAA ATCGG TTTTGGGA CGTGGCAGATACCTA COPRO5265_0053 46922 - 47743 + | oxidoreductase TERM 29 47772 - 47804 + F 100 -12 -5.09173 | overlap 47773 47774 ATCCTCACACTTACC TAGTGCAGCCTACC TAAAT GGTAGGCTGCACGC TTTTTTGAAATGTTA TERM 30 47773 - 47803 + F 100 -15.5 -3.6442 | overlap 47772 47774 TCCTCACACTTACCT AGTGCAGCCTACC TAAAT GGTAGGCTGCACG CTTTTTTGAAATGTT TERM 31 47774 - 47802 + F 100 -19 -2.77567 | overlap 47773 47772 CCTCACACTTACCTA GTGCAGCCTACC TAAAT GGTAGGCTGCAC GCTTTTTTGAAATGT COPRO5265_0054 47961 - 48530 + | serine acetyltransferase (SAT) COPRO5265_0055 48527 - 49396 + | cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase) (Superoxide-inducible protein 11)(SOI11) TERM 32 49554 - 49581 + F 86 -5.6 -5.3104 | gap 1, overlap 49555 AGTTACTTAACTCCC G-GCCTCCGAT TCCCCCC GTCGGAGGCTC TTTTCTTTTTAATCC TERM 33 49555 - 49579 + F 88 -9.3 -4.26857 | overlap 49554 GTTACTTAACTCCCG GCCTCCGAT TCCCCCC GTCGGAGGC TCTTTTCTTTTTAAT COPRO5265_0056 49711 - 50361 + | redoxin superfamily TERM 34 50398 - 50420 + G 100 -13.5 -5.05505 | ATCACTTAACTTTAA GCCTCCGAT CCCAC ATCGGAGGC TTTTTCATTTATAAT TERM 35 52227 - 52209 - g 74 -6 -4.65168 | opp_overlap 52209 ACCACAGCCGAAAAA GAAGAAGA ACG TCGTCTTC TTTATGTAGCCATGA pcrA 50337 - 52427 + | ATP-dependent DNA helicase PcrA TERM 36 52456 - 52471 + T 82 -7.6 -4.44046 | opp_overlap 52456 TAATCTTCTTGTAAA TGTTCC ACGT GGAACA TTTCTTTGAAGTCCA TERM 37 52575 - 52544 - T 100 -5.2 -6.02914 | opp_overlap 52551 TTCATACAAAAAAAA GAGGAAGGAG CGTCTACGCTAT CTCCTTCCCC CTAACCGAGTAAGCT COPRO5265_0058 52910 - 52620 - | molybdopterin converting factor subunit 1 COPRO5265_0059 54741 - 52897 - | tungsten-containing aldehyde ferredoxin oxidoreductase TERM 38 54850 - 54898 + r 74 -9.8 -3.22878 | gap 1, opp_overlap 54854 54864, overlap 54855 54864 GTGCTTTTAACATAC TTAATTGCAGACAAGGGAGACCT TATT AGCTCTCCCTTGTC-GTGAATAA TGTTACATTTACTTG TERM 39 54855 - 54895 + r 75 -10.6 -2.79248 | gap 1, opp_overlap 54854 54864, overlap 54850 54864 TTTAACATACTTAAT TGCA-GACAAGGGAGACCT TATT AGCTCTCCCTTGTCGTGAA TAATGTTACATTTAC TERM 40 54864 - 54885 + r 73 -8.7 -3.42996 | opp_overlap 54854 54864, overlap 54855 54850 CTTAATTGCAGACAA GGGAGACCT TATT AGCTCTCCC TTGTCGTGAATAATG TERM 41 54885 - 54864 - R 73 -8.7 -3.52192 | opp_overlap 54864 54855 54850, overlap 54854 CTTAATTGCAGACAA GGGAGACCT TATT AGCTCTCCC TTGTCGTGAATAATG COPRO5265_0060 56242 - 54914 - | TldD/PmbA family protein, putative TERM 42 55063 - 55097 + g 83 -9.5 -4.1021 | overlap 55084 55085 TATTGTTAAGTGCTT TGGTGACCTTCC-CATC CTC GATGAGGAAGGT-GCCA TTTCTCGTTATACCC COPRO5265_0061 57651 - 56242 - | LmbIH TERM 43 56412 - 56425 + gH 71 -3.8 -4.83615 | ACTCCGGCGTTATAC CCCA GTAAGA TGGG TTTTTGTAAAGCCTG TERM 44 57289 - 57312 + gH 83 -4.6 -5.39721 | gap 1 TGTAGCCATAACCTT GTCAGCCT-CT AAC AGCAAGCTGAC TTTTTTATCTAGTGG dnaA 57624 - 59255 + | chromosomal replication initiator protein DnaA COPRO5265_0063 59441 - 59304 - | hypothetical protein COPRO5265_0064 60299 - 59535 - | ZIP zinc transporter family protein COPRO5265_0065 60459 - 60358 - | hypothetical protein dnaN 60595 - 61680 + | DNA polymerase III, beta subunit COPRO5265_0067 61681 - 61914 + | hypothetical protein TERM 45 61940 - 61973 + F 100 -20.5 -4.87273 | GAATCCATGGCAGAG CGTAGGGTTCACTCA TCTT TGGGTGAACCCTACG TTTTTATCGCCTATT norM 62194 - 63627 + | Na+-driven multidrug efflux pump COPRO5265_0069 63754 - 65376 + | maltose ABC transporter, periplasmic maltose-binding protein TERM 46 65448 - 65394 - f 76 -7 -4.5442 | overlap 65395 TTGTCAATGACAAAA GGTGTGCAGGGCGACAAGAATCACAT TGC AAGTTGTAGTGGTCGCCCTGCACACA CGTCAAGAGTGAAAT TERM 47 65447 - 65395 - f 78 -10.5 -3.3217 | overlap 65394 TGTCAATGACAAAAG GTGTGCAGGGCGACAAGAATCACAT TGC AAGTTGTAGTGGTCGCCCTGCACAC ACGTCAAGAGTGAAA COPRO5265_0070 65513 - 66433 + | maltose transport system permease protein MalF malG 66440 - 67309 + | ABC-type Maltose/ Maltodextrin permease COPRO5265_0072 67377 - 67481 + | hypothetical protein TERM 48 71641 - 71622 - g 74 -7.2 -4.21768 | overlap 71623 CAATGAAGGTGAAAA CGTCATTG AAAT CAATGACA CCACAGGCAGGGTTC COPRO5265_0073 67462 - 72345 + | amylopullulanase (Alpha-amylase/pullulanase) TERM 49 72384 - 72407 + T 100 -13.8 -5.58209 | opp_overlap 72384 72398 TTGACGAAGCCAAAA GGGGCGCCCT TAAA GGGGTGCCCC TTTTTTTGAGTTTGA TERM 50 72407 - 72384 - T 100 -10.9 -4.30014 | opp_overlap 72384, overlap 72398 TTGACGAAGCCAAAA GGGGCGCCC TTAAAG GGGTGCCCC TTTTTTTGAGTTTGA COPRO5265_0074 73266 - 72454 - | nucleotide-binding protein TERM 51 73652 - 73669 + G 71 -9.9 -3.22521 | opp_overlap 73651 73650 GCCTGACTCAGAAGT CCAGCTT CTGG AAGCTGG TTGGATTCGTATGCC COPRO5265_0075 73362 - 74567 + | anion ABC transporter, anion-binding protein TERM 52 74600 - 74629 + F 79 -10.8 -3.1733 | opp_overlap 74600 74603, overlap 74598 74597 74603 ATAAGTAAGAGGAAA GAAGGGCACC AATTCTCACG GGTGCCCTTC TCGTTTTGTGGCCCC TERM 53 74629 - 74600 - f 100 -12.9 -3.97812 | opp_overlap 74600 74598 74597 74603, overlap 74603 ATAAGTAAGAGGAAA GAAGGGCACCAAT TCTC ACGGGTGCCCTTC TCGTTTTGTGGCCCC TERM 54 74626 - 74603 - f 83 -8.8 -4.09455 | opp_overlap 74603 74600 74598 74597, overlap 74600 AGTAAGAGGAAAGAA GGGCACCAAT TCTC ACGGGTGCCC TTCTCGTTTTGTGGC COPRO5265_0076 74798 - 75544 + | anion ABC transporter, anion-binding protein COPRO5265_0077 75584 - 76216 + | permease component of tungstate ABC transporter COPRO5265_0078 76203 - 76790 + | phosphate import ATP-binding protein PstB 2 (Phosphate-transporting ATPase 2) (ABC phosphate transporter 2) TERM 55 77680 - 77709 + G 75 -6.5 -4.42386 | gap 1, overlap 77681 77685 CAGTGCTCCTGAGCT TGTAAGGGGAACCA CCA TGGTTCCTC-TGCG TTTTGTCGCTCAAAC TERM 56 77685 - 77705 + G 77 -11.9 -2.80791 | overlap 77681 77680 CTCCTGAGCTTGTAA GGGGAACCA CCA TGGTTCCTC TGCGTTTTGTCGCTC COPRO5265_0079 76883 - 77782 + | copper amine oxidase N- domain family TERM 57 77801 - 77789 - Tf 77 -6.3 -4.7254 | opp_overlap 77789 77787 ACTTTTTAGCAAAAA GCAAA CAG TTTGC TCTTGTCACACTTCC TERM 58 79585 - 79609 + GT 74 -9.3 -3.40073 | overlap 79587 CATGGCTCTTGGAAG TGCTGCCGGAA CCA TTCCTGCAGTA TTCATTGGTGGACCT TERM 59 79587 - 79607 + GT 76 -9.7 -3.27029 | overlap 79585 TGGCTCTTGGAAGTG CTGCCGGAA CCA TTCCTGCAG TATTCATTGGTGGAC COPRO5265_0080 79857 - 79705 - | hypothetical protein COPRO5265_0081 78005 - 83560 + | protease TERM 60 83598 - 83621 + FH 100 -12.4 -4.51812 | opp_overlap 83586, overlap 83601 GAATTGACTTTGGGC CAAGGGGGGC ATTT GCCCCCCTTC TTTGTTGTTGTGAAC TERM 61 83601 - 83618 + FH 100 -14.1 -4.35992 | overlap 83598 TTGACTTTGGGCCAA GGGGGGC ATTT GCCCCCC TTCTTTGTTGTTGTG COPRO5265_0082 83962 - 86745 + | copper amine oxidase N- domain family TERM 62 86777 - 86817 + F 100 -11.9 -4.3953 | opp_overlap 86779 86782 86801, overlap 86779 86784 TAAGTAGTAGATCCA AAGAAGAGGGGTGCCCC ACTAAAA GGGGTGCCCCTTTTCTA TTTGTTGTGGTTAAA TERM 63 86779 - 86815 + F 100 -14.5 -3.79611 | opp_overlap 86779 86782 86801, overlap 86777 86784 AGTAGTAGATCCAAA GAAGAGGGGTGCCCC ACTAAAA GGGGTGCCCCTTTTC TATTTGTTGTGGTTA TERM 64 86815 - 86779 - f 70 -7.9 -3.72968 | opp_overlap 86779 86777 86784, overlap 86782 86801 AGTAGTAGATCCAAA GAAGAGGGGTGCCCC ACTAAAA GGGGTGCCCCTTTTC TATTTGTTGTGGTTA TERM 65 86784 - 86810 + F 100 -10.8 -4.91194 | opp_overlap 86782 86779 86801, overlap 86779 86777 TAGATCCAAAGAAGA GGGGTGCCCC ACTAAAA GGGGTGCCCC TTTTCTATTTGTTGT TERM 66 87199 - 87181 - g 75 -6.7 -4.52857 | overlap 87182 AGCTGGGAGACAAAA GCGACGA TATGT TCATCGC CGTGGCTGCCATAAC COPRO5265_0083 86871 - 87242 + | hypothetical protein TERM 67 88701 - 88724 + G 73 -7.4 -4.15508 | overlap 88688 88707 CAGCCCTTATCGTTG TGGGCTTCCT CATG ATGGAGCCCA TTTTGAAGATTGATT COPRO5265_0085 87611 - 88933 + | xanthine/uracil permease family COPRO5265_0086 89160 - 89381 + | hypothetical protein TERM 68 89601 - 89589 - f 76 -7.7 -4.21194 | opp_overlap 89592, overlap 89594 CTGGAGCATTTAAAA CAGGA GTT TCCTG GCTATGAGCAGGAGA COPRO5265_0087 89619 - 90668 + | hypothetical protein COPRO5265_0088 90613 - 91860 + | hypothetical protein TERM 69 92786 - 92767 - g 72 -8.6 -3.69902 | AGGAAATATGGTAAA TTACACCC TCAA GGGTGCAA AGCGTATTGGTTTTG TERM 70 93692 - 93667 - g 76 -8.3 -4.18018 | opp_overlap 93672, overlap 93669 TGGTGGCATTCAAAA CAGAACAGCTG AAGC CAGCGGTTCTA TGAAGAACACATTGA TERM 71 93690 - 93669 - g 72 -8.7 -3.69216 | opp_overlap 93672, overlap 93667 GTGGCATTCAAAACA GAACAGCTG AAGC CAGCGGTTC TATGAAGAACACATT COPRO5265_0089 92033 - 94027 + | methyl-accepting chemotaxis protein COPRO5265_0090 94560 - 95213 + | L-ribulose 5-phosphate 4-epimerase TERM 72 95845 - 95815 - g 79 -4.2 -5.09895 | overlap 95819 CACCGATCTAAAAAA CAATCCTAT-AGGC ACTGG GCCTTATAGG-TTG GCAAATTGGGTTAGA TERM 73 96433 - 96445 + G 79 -7.7 -4.41348 | overlap 96435 TGAAAGCACTGGACT GGTGA AGG TCACC TTTGTTTACAAACCC COPRO5265_0091 95273 - 96820 + | oligopeptide ABC transporter (binding protein), putative COPRO5265_0092 96841 - 97248 + | hypothetical protein TERM 74 97403 - 97389 - g 74 -5.6 -4.62069 | GGCTCACTGCAAAAA CCGCTG TGG CAGTGG TGAGAGCCGACGATG COPRO5265_0093 97298 - 97741 + | hypothetical protein COPRO5265_0094 98685 - 97774 - | hypothetical protein COPRO5265_0095 99472 - 98657 - | hypothetical protein COPRO5265_0096 99861 - 99478 - | 6-pyruvoyl-tetrahydropterin synthase COPRO5265_0097 100169 - 99915 - | hypothetical protein COPRO5265_0098 100617 - 100177 - | DNA-directed RNA polymerase ECF-type sigma factor COPRO5265_0099 101693 - 100614 - | hypothetical protein TERM 75 101248 - 101211 - GH 100 -14.3 -3.80083 | gap 1, overlap 101200 AAAATCCAAGTGAAA TGACA-GGGCAGAAGAGG TTT CTTCTTCCGCCCATGTCA GTGCCTCCAATGGGG COPRO5265_0101 101675 - 101797 + | hypothetical protein pspC 102283 - 101747 - | putative stress-responsive transcriptional regulator COPRO5265_0102 102482 - 102273 - | PspC domain protein COPRO5265_0103 103265 - 102891 - | hypothetical protein COPRO5265_0104 102587 - 102943 + | hypothetical protein TERM 76 102984 - 102998 + gT 80 -7.1 -4.57353 | overlap 102989 CGCTATGGAATAGTT GTGGC GAAGA GCCAC TTTTCTGTACTGAAG COPRO5265_0105 103656 - 103288 - | hypothetical protein COPRO5265_0107 104052 - 103684 - | hypothetical protein TERM 77 103843 - 103855 + g 76 -7.7 -4.21194 | TTGTACTTCCTCGGG CGTGA CGG TCACG TTTTCAGTGGTGCCG COPRO5265_0108 104344 - 104090 - | hypothetical protein COPRO5265_0109 104117 - 104302 + | hypothetical protein COPRO5265_0110 104515 - 105318 + | hypothetical protein COPRO5265_0111 105315 - 105791 + | hypothetical protein TERM 78 105869 - 105885 + G 74 -8.7 -3.86897 | GTCGCCATTTTAGCT GCGGGTA CAT TACCTGC TTTGTCAAACATCAA TERM 79 106174 - 106157 - g 76 -9.1 -3.68351 | overlap 106160 GGTTCACCATTTAAA GAAGGCG ACAC CGCCTCC CACGAGGACACTAGT COPRO5265_0112 105797 - 107185 + | prokaryotic N- methylation motif domain protein COPRO5265_0114 107299 - 107721 + | chemotaxis protein TERM 80 107716 - 107726 + T 82 -3.2 -5.52807 | TCTGAGGTTACTGCT CCAT AAT GTGG TTTTTCTTTCTTGTT COPRO5265_0113 110869 - 107708 - | ggdef domain protein COPRO5265_0115 112140 - 110962 - | beta-N-Acetylglucosaminidase COPRO5265_0116 111408 - 111551 + | hypothetical protein guaB 112481 - 113938 + | inosine-5'-monophosphate dehydrogenase TERM 81 114417 - 114431 + G 75 -2.8 -5.21709 | CGTTTAGCAGCATTT CAAAAG GAG CCTTTG TTTTTTGCTGTGCAG COPRO5265_0118 113946 - 115481 + | GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase) (GMP synthetase) TERM 82 115510 - 115534 + T 100 -15 -5.1861 | opp_overlap 115510 115507 115506 AACGTAGAAAAGGGA GCAGCGGTGC AGAAA GCGCCGCTGC TTTTTTACTAATAAG TERM 83 115534 - 115510 - T 91 -12.8 -2.81193 | opp_overlap 115510, overlap 115507 115506 AACGTAGAAAAGGGA GCAGCGGTGC AGAAA GCGCCGCTGC TTTTTTACTAATAAG TERM 84 115590 - 115604 + T 75 -2.1 -5.28176 | AAATCAAACCAGGCT CTTGT GGGAA GCAAG TTTTTTCTCCCTCGA COPRO5265_0119 116503 - 116024 - | rubrerythrin-related protein TERM 85 116365 - 116380 + g 76 -7.6 -4.22554 | GCTGTGCCTCCCAGT CTGCAA GCTC TTGCAG TTCTTTCTTGGCTGC COPRO5265_0120 116914 - 116510 - | hypothetical protein COPRO5265_0121 117980 - 116922 - | hypothetical protein TERM 86 117026 - 117039 + g 73 -4.5 -4.88067 | AGCACTGCGGATTAG CCACG TAAA TGTGG TTTTTATCCATGAGT TERM 87 117214 - 117204 - G 77 -6.8 -4.52857 | AGGCGGTACATAAAA CACC GTT GGTG TAAGTATTTGCACAC COPRO5265_0122 118464 - 117967 - | Appr-1-p processing enzyme family protein COPRO5265_0123 118486 - 118857 + | hypothetical protein TERM 88 119019 - 119043 + GF 90 -10.9 -3.96148 | opp_overlap 119018 119017 119023, overlap 119023 ACACCACTAGAAAGG CAAATCTTTGG TCC TCAAAGATTTG TTTATGATGCAACGC TERM 89 119023 - 119039 + GF 75 -5.9 -4.59342 | opp_overlap 119023 119018 119017, overlap 119019 CACTAGAAAGGCAAA TCTTTGG TCC TCAAAGA TTTGTTTATGATGCA COPRO5265_0124 118869 - 119102 + | hypothetical protein COPRO5265_0126 119077 - 120297 + | hypothetical protein COPRO5265_0125 121711 - 120287 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) TERM 90 121644 - 121656 + g 75 -2.7 -5.09762 | TCGGTAGGGCAACTG CAGAA CAT TTTTG TTTTTGTATTAAGCT COPRO5265_0127 123102 - 121708 - | glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) TERM 91 122108 - 122126 + g 79 -7.5 -4.44667 | AGATTACGTGTTTCC CTTACTG TGTCC CAGTAAG TTTCTTCTTCCACCA TERM 92 122910 - 122925 + g 78 -6.1 -4.57341 | overlap 122903 CCGGTATACCCTGCA GGGGT CTTCTA ACCCC TTTTTCCCAAGCCTT COPRO5265_0128 123401 - 123108 - | glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADTsubunit C) TERM 93 123555 - 123524 - R 100 -12.4 -4.82901 | gap 1, opp_overlap 123529 123550, overlap 123527 123529 TTCGTTTGATAAAAA GAAGAGGGGAGCCCA ACT TGGGCTCCCCT-TTG AAAAGGTTGCTTAGA TERM 94 123553 - 123527 - R 100 -16.6 -4.52873 | opp_overlap 123529 123550, overlap 123524 123529 GTTTGATAAAAAGAA GAGGGGAGCCCA ACT TGGGCTCCCCTT TGAAAAGGTTGCTTA TERM 95 123529 - 123551 + r 100 -19.2 -3.55801 | opp_overlap 123529 123527 123524, overlap 123550 TTGATAAAAAGAAGA GGGGAGCCCA ACT TGGGCTCCCC TTTGAAAAGGTTGCT TERM 96 123551 - 123529 - R 100 -19.2 -3.86816 | opp_overlap 123529 123550, overlap 123527 123524 TTGATAAAAAGAAGA GGGGAGCCCA ACT TGGGCTCCCC TTTGAAAAGGTTGCT COPRO5265_0129 125976 - 123586 - | bacterial extracellular solute-binding protein, family 5 TERM 97 126104 - 126075 - R 100 -13.6 -3.56937 | opp_overlap 126070, overlap 126071 126077 GAATACTTAAATGAA TAGAGGGGAGCC AACTTG GGCTCCCCTCTG AAAAGGTTGCTTAGA TERM 98 126102 - 126077 - R 100 -16.2 -3.35011 | opp_overlap 126070, overlap 126075 126071 ATACTTAAATGAATA GAGGGGAGCC AACTTG GGCTCCCCTC TGAAAAGGTTGCTTA COPRO5265_0130 128525 - 126135 - | bacterial extracellular solute-binding protein, family 5 TERM 99 127244 - 127272 + g 72 -3.1 -5.03994 | overlap 127245 GCATGGGCTTTGTGT TGTAGGAGCTGTT TAC AATGGCTTCAACG TTTTTGTCTATGACC COPRO5265_0131 130757 - 128694 - | hypothetical protein TERM 100 129214 - 129231 + g 76 -4.1 -4.93696 | overlap 129215 TTAACCAAGCCCTTT GTTGTGG AAGC CCACAAG TTTTTACTATTTGCA TERM 101 129897 - 129881 - G 83 -6.5 -5.03314 | CGTAGGTGGAAAAAA GGCCATT TGG AGTGGCC AAGAAAAACTGTCCT TERM 102 130012 - 130028 + g 71 -7.9 -3.95022 | opp_overlap 129998 130004, overlap 130013 ACATAGACGCTGTCT TCGCTGG CTG CCAGCGC TTTAATGTTACTGGA TERM 103 130013 - 130027 + g 75 -11.4 -2.96531 | opp_overlap 129998 130004, overlap 130012 CATAGACGCTGTCTT CGCTGG CTG CCAGCG CTTTAATGTTACTGG ligA 132750 - 130750 - | DNA ligase, NAD-dependent TERM 104 132251 - 132267 + g 74 -7.3 -4.20696 | overlap 132241 CGAATTTCTACTACG GGTGGAA TGT TTTCACC TTTTAACCTTAATGG TERM 105 132391 - 132381 - G 77 -6.8 -4.53303 | opp_overlap 132387, overlap 132364 CATTTTCATACAAAA GGCT CAC AGCC AAGCCGTCTAATTTG COPRO5265_0133 133307 - 132828 - | SAM radical enzyme COPRO5265_0134 135076 - 133289 - | radical SAM domain protein TERM 106 133956 - 133972 + gH 73 -2.3 -5.15634 | overlap 133951 AGGATTTCTTCATTG CTAAATG GTT TGTTTAG TTTTTTCCTAAGCTG COPRO5265_0135 134390 - 134503 + | hypothetical protein COPRO5265_0136 135176 - 135277 + | hypothetical protein TERM 107 135944 - 135932 - gTf 77 -3.3 -5.20781 | TATCATAAAACAAAA TCCCG TAA CTGGA GAAGGTTTACCAGCA TERM 108 136364 - 136353 - gTf 74 -7.2 -4.20749 | opp_overlap 136352, overlap 136343 136341 GAAGACCTTAACAAA GGGC CTGA GCCC ATATTCGGTAGCTCT COPRO5265_0137 135246 - 137045 + | tungsten-containing aldehyde ferredoxin oxidoreductase TERM 109 137185 - 137230 + GT 100 -20.7 -4.09685 | gap 1, opp_overlap 137188 137191, overlap 137188 GGTCAACCTGTAAGT GAAGAACTGTTCCGGGGA-GAC GAA GTTATCCCCGGAACAGTTCTGC TTTTGAACGGTAAGA TERM 110 137188 - 137227 + GT 100 -21 -3.08508 | gap 1, opp_overlap 137188 137191, overlap 137185 CAACCTGTAAGTGAA GAACTGTTCCGGGGA-GAC GAA GTTATCCCCGGAACAGTTC TGCTTTTGAACGGTA TERM 111 137227 - 137188 - gT 100 -19.5 -3.18199 | opp_overlap 137188 137185, overlap 137191 CAACCTGTAAGTGAA GAACTGTTCCGGGGAGA CGAAGT TATCCCCGGAACAGTTC TGCTTTTGAACGGTA TERM 112 137224 - 137191 - gT 100 -15.4 -3.73068 | opp_overlap 137188 137185, overlap 137188 CCTGTAAGTGAAGAA CTGTTCCGGGGAGA CGAAGT TATCCCCGGAACAG TTCTGCTTTTGAACG COPRO5265_0138 138542 - 137268 - | small GTP-binding protein domain COPRO5265_0139 137047 - 137325 + | MoaD family protein TERM 113 138250 - 138260 + gT 71 -6.8 -4.04474 | overlap 138257 138259 TCTACCACCAGTATG GCTG CGT CAGC TTTATATAAAGCTCT COPRO5265_0140 139585 - 138539 - | radical SAM domain protein TERM 114 138833 - 138843 + g 76 -4 -5.07567 | TCTTGTCAGCGCTAC CATT TTC AATG TTTTTTCCAGTGTCC COPRO5265_0141 141231 - 139801 - | thiamine biosynthesis enzyme COPRO5265_0142 141491 - 141249 - | hypothetical protein TERM 115 142226 - 142208 - g 81 -3.9 -5.4148 | opp_overlap 142211 GAAACAACGAAAAAA CAAGATG CGCCC CATCTTA TCTGCAGAAGTGGTT COPRO5265_0143 141744 - 142814 + | tungsten-containing aldehyde ferredoxin oxidoreductase cofactor-modifying protein ahcY 142853 - 144091 + | adenosylhomocysteinase bcp 144557 - 144102 - | bacterioferritin comigratory protein TERM 116 146517 - 146535 + Gr 74 -6 -4.56597 | opp_overlap 146517 GCTGAGAATGACGAA CAGCATTT TAG ATATGCTG TTTTTCAGGCAGCAC COPRO5265_0146 144543 - 147722 + | ggdef domain protein trmE 149049 - 147754 - | tRNA modification GTPase TrmE COPRO5265_0148 150022 - 149111 - | hypothetical protein COPRO5265_0149 151558 - 150044 - | RNA-metabolising metallo-beta-lactamase TERM 117 151794 - 151778 - R 78 -7.3 -4.57073 | opp_overlap 151778 151778, overlap 151781 TATGTCTGGTAAAAA CAAGAAG AGG CTCCTTG TCAATTAGAAGCCTC TERM 118 151812 - 151781 - R 100 -11 -4.40561 | opp_overlap 151778 151778, overlap 151778 151806 GTCTGGTAAAAACAA GAAGAGGCTCCT TGTCAATT AGAAGCCTCTTC GAGATGTTTAGCTAT COPRO5265_0150 153528 - 151852 - | hypothetical protein TERM 119 153125 - 153143 + g 77 -11 -3.28269 | ATTTCCACGCTTCCC GTGGCCTG CTC CAGGTCAC TTAACTTTGCAGCTT COPRO5265_0151 155498 - 153525 - | mmpl family COPRO5265_0152 156987 - 155644 - | mate efflux family protein COPRO5265_0153 157309 - 157887 + | Xaa-Pro dipeptidase COPRO5265_0154 158422 - 157892 - | chromate transport protein COPRO5265_0155 158937 - 158380 - | chromate transport protein TERM 120 158467 - 158451 - GH 74 -9.5 -3.38036 | opp_overlap 158454, overlap 158454 CTAAGTAAACCAATA TAACCCA AGC TGGGTTA ATTCCCAAAGCAAAT TERM 121 158561 - 158548 - GH 74 -8.1 -3.90744 | TCTTTTGGTAAACAA CTGCC ACAC GGCAG CTACCATGAGTGCTG TERM 122 159138 - 159152 + G 80 -5.7 -4.9792 | ATGTTTTCTCTGGGA GTAGC CATTA GCTAC TTTTTCTATGGAATA COPRO5265_0156 158976 - 159644 + | cytochrome C biogenesis protein transmembrane region TERM 123 159952 - 159965 + G 74 -8.1 -4.0127 | CTACGTTTTACTACG GTGGC GCAT GCCAC TTTCATTGTAAATAT COPRO5265_0157 159694 - 160536 + | hypothetical protein TERM 124 160548 - 160538 - f 71 -3.2 -4.91778 | TAAATACAAAATAAA CAAC AAA GCTG TAGGATACTCAGGTC COPRO5265_0158 160678 - 161928 + | NAD-specific glutamate dehydrogenase (NAD-GDH) COPRO5265_0159 161955 - 162056 + | hypothetical protein TERM 125 162041 - 162071 + F 100 -15.5 -5.80727 | ATCTTTCTCTCCTTT GGAGGGCGGCTCA TAGGT TGAGCCGCCTTTC TTTTTTGTTGTTTTT glyA1 162162 - 163205 + | serine hydroxymethyltransferase COPRO5265_0161 164288 - 163341 - | hypothetical protein COPRO5265_0162 165074 - 164424 - | hypothetical protein TERM 126 164953 - 164941 - G 87 -10.5 -4.15565 | opp_overlap 164940 TGGATCAGGTCAAAA GCGCC TGC GGCGC CTCTTAGAACCAAAT proP1 165171 - 166412 + | permeases of the major facilitator superfamily TERM 127 166596 - 166584 - g 75 -2.7 -5.14477 | GAGACACTTAAAAAA CACAA ACT TTATG CTACTTGGGGTACGG TERM 128 166894 - 166872 - g 72 -6.3 -4.30719 | opp_overlap 166892, overlap 166893 TTCTTTGAGAAGAAA TATCCGCGC TTGGT GCGCAAATA CGAGTACTAGGGCAA mgsA 166464 - 166904 + | methylglyoxal synthase TERM 129 166892 - 166928 + T 93 -11 -4.09685 | gap 1, opp_overlap 166872 166893 166895 166896 166898, overlap 166896 166898 GCGCTTGGTGCGCAA ATAC-GAGTACTAGGGC AATA GCCCTAGTACTCTGTGC TTTTCCACAATGGCG TERM 130 166927 - 166893 - T 100 -12.3 -3.53012 | gap 1, opp_overlap 166892 166896 166898, overlap 166872 166895 166896 166898 CGCTTGGTGCGCAAA TAC-GAGTACTAGGGC AATA GCCCTAGTACTCTGTG CTTTTCCACAATGGC TERM 131 166924 - 166895 - T 100 -15.1 -3.34398 | opp_overlap 166892 166896 166898, overlap 166893 166896 166898 CTTGGTGCGCAAATA CGAGTACTAGGGC AATA GCCCTAGTACTCT GTGCTTTTCCACAAT TERM 132 166923 - 166896 - T 100 -18.6 -2.60496 | opp_overlap 166892 166896 166898, overlap 166895 166893 166898 TTGGTGCGCAAATAC GAGTACTAGGGC AATA GCCCTAGTACTC TGTGCTTTTCCACAA TERM 133 166896 - 166923 + T 100 -18.6 -3.09823 | opp_overlap 166896 166895 166893 166898, overlap 166892 166898 TTGGTGCGCAAATAC GAGTACTAGGGC AATA GCCCTAGTACTC TGTGCTTTTCCACAA TERM 134 166921 - 166898 - T 100 -15.4 -2.84325 | opp_overlap 166896 166892 166898, overlap 166896 166895 166893 GGTGCGCAAATACGA GTACTAGGGC AATA GCCCTAGTAC TCTGTGCTTTTCCAC TERM 135 166898 - 166921 + T 100 -15.4 -3.10533 | opp_overlap 166898 166896 166895 166893, overlap 166896 166892 GGTGCGCAAATACGA GTACTAGGGC AATA GCCCTAGTAC TCTGTGCTTTTCCAC COPRO5265_0164 168082 - 166901 - | nitric oxide reductase (Type A flavoprotein FprA) (FMNprotein fprA) (Flavoprotein A) TERM 136 168758 - 168773 + G 72 -9 -3.54902 | overlap 168753 AGGTGGGTGTGGATT GCGGTA ACGG TACCGC TTCCTTGTTCGCTCC COPRO5265_0166 168241 - 169617 + | phosphomannomutase/phosphoglucomutase (PMM /PGM) TERM 137 169740 - 169726 - g 78 -5 -5.01845 | GACAAGAATGAAAAA GCTACT CGC AATAGC AGCAGTCATAGTGCT TERM 138 169856 - 169836 - g 77 -10.5 -3.42841 | ACAATCGCATGACAA CAGCAAGTG CAC CACTTACTG CCACACCACTAAGTA COPRO5265_0167 169718 - 170662 + | hypothetical protein TERM 139 170683 - 170719 + T 100 -13.1 -3.26649 | opp_overlap 170687, overlap 170686 AACGATAAGTGCAGC CAAACAGAGCCTCCT TCTTAAT GGGAGGCTCTGCTTG TTAATCTGAGACTGT TERM 140 170686 - 170716 + T 78 -9 -3.7732 | opp_overlap 170687, overlap 170683 GATAAGTGCAGCCAA ACAGAGCCTCCT TCTTAAT GGGAGGCTCTGC TTGTTAATCTGAGAC TERM 141 170715 - 170687 - T 93 -11.8 -3.67141 | opp_overlap 170686 170683 ATAAGTGCAGCCAAA CAGAGCCTCC TTCTTAATG GGAGGCTCTG CTTGTTAATCTGAGA COPRO5265_0168 172658 - 170700 - | cadmium, zinc and cobalt-transporting ATPase, putative COPRO5265_0169 172977 - 172660 - | transcriptional regulator, ArsR family TERM 142 173150 - 173160 + G 72 -5.4 -4.42118 | overlap 173140 TCATATTGTCACTTA CAAG TTT CTTG TTCTTTCTTGTTTTG COPRO5265_0170 173098 - 174519 + | Ser/Thr protein phosphatase family protein TERM 143 174839 - 174803 - g 79 -11 -3.44146 | opp_overlap 174802 TTTTGGGATAATGAA GTTCCCACCCATGATA CCTTT CATCATGATTGGGAAC GCTTTGTATGTACTG TERM 144 174901 - 174911 + G 73 -4 -4.88067 | GTATGGTATTAGGTT CTTT AGT AAAG TTTTTGTGGCTCAGT COPRO5265_0171 174603 - 175079 + | HymD protein COPRO5265_0172 175092 - 175463 + | hypothetical protein rsbW 175432 - 175884 + | anti-sigma regulatory factor (Ser/Thr protein kinase) napF 175874 - 177226 + | ferredoxin 2 COPRO5265_0175 177233 - 177577 + | hypothetical protein COPRO5265_0176 177578 - 178291 + | PHP domain, putative TERM 145 178280 - 178308 + F 95 -7.6 -5.12617 | gap 1 CTTAAACACTTAAGT GGCTTTGCGTGAA AGCC TTCA-GCAAAGTC TTTTTTAACTCGTTA COPRO5265_0177 178434 - 178952 + | Fe-hydrogenase gamma subunit TERM 146 179173 - 179183 + G 72 -3.2 -5.07107 | AACGCCGTTTCGGTC TGGG AAT TCCA TTTTTTAAGGATTTG baeS 178965 - 179558 + | sensory transduction histidine kinase COPRO5265_0179 179545 - 179925 + | ferredoxin TERM 147 180307 - 180290 - g 75 -2.7 -5.26918 | gap 1 ACATTCTACAAAAAA CAAATGCG TGT CGC-TCTG AGGAACTGCGGCATC nuoF 179951 - 181741 + | NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit COPRO5265_0181 181760 - 183505 + | hydrogenase TERM 148 183538 - 183516 - T 100 -17.8 -5.84432 | opp_overlap 183516 GATAATACAAAAAAA GGGGCGAGAA TTA TTCTCGCCCC TTTTAAGGTTCCAAC TERM 149 183516 - 183538 + T 100 -17.8 -4.19238 | opp_overlap 183516 GATAATACAAAAAAA GGGGCGAGAA TTA TTCTCGCCCC TTTTAAGGTTCCAAC COPRO5265_0182 184936 - 183566 - | Gnt-II system L-idonate transporter (L-Ido transporter) TERM 150 184972 - 184991 + r 78 -9.3 -3.65046 | CTGAATGTATTTTTG CCTCCAG AGACTA CTGGAGG TTGTTACCCTGACGA pdxA 186008 - 184995 - | 4-hydroxythreonine-4-phosphate dehydrogenase COPRO5265_0184 187272 - 186013 - | hypothetical protein COPRO5265_0185 188039 - 187278 - | transcriptional regulator, DeoR family TERM 151 187597 - 187582 - G 74 -6.8 -4.25283 | opp_overlap 187589 ATTTCTTCAGCAAAA GAGCCA GTAA CGGCTC CCACGTTAGTTTGGA COPRO5265_0186 188196 - 189455 + | secernin 2 COPRO5265_0187 189700 - 191157 + | copper amine oxidase N- domain family COPRO5265_0189 191391 - 191495 + | hypothetical protein COPRO5265_0188 192349 - 191492 - | permease, drug/metabolite transporter (DMT) superfamily, putative purE 192484 - 192969 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit purC 192993 - 193703 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purS 193705 - 193956 + | phosphoribosylformylglycinamidine synthase, PurS protein purQ 193962 - 194639 + | phosphoribosylformylglycinamidine synthase I TERM 152 196007 - 195981 - gf 100 -12.4 -4.36914 | GTGGTTCGCATAAAA GGTAAACACCAA GCG CTGGCGTTTACC ACTGACTGCAATGCC TERM 153 196202 - 196188 - gf 78 -10 -3.48593 | opp_overlap 196181 CAGCGCTGCATAGAA GGCATC AGA GATGCC TGCCAAGTCTTGAAC purL 194646 - 196862 + | phosphoribosylformylglycinamidine synthase II TERM 154 197298 - 197287 - gf 70 -2.2 -5.0538 | CCTCATGGCAAAAAA CCTC CACA AAGG TTTTGAAAACGCGCT TERM 155 197348 - 197360 + GF 74 -5.5 -4.56597 | ATAAAGGGTTCCTAT GCACT GCT GGTGC TTTTTGACAACACGC TERM 156 197819 - 197807 - gf 78 -6.3 -4.63048 | CTCATAAAGAACAAA TACGT GGG ACGTA CCTTCATAGCGCCTG purF 196811 - 198253 + | amidophosphoribosyltransferase TERM 157 198538 - 198554 + G 73 -2.1 -5.13741 | ACGATGTCATCACCA CGGGAGC GAA GCCTCTG TTTTTCTTGGATTAC purM 198267 - 199283 + | phosphoribosylformylglycinamidine cyclo-ligase purN 199280 - 199927 + | phosphoribosylglycinamide formyltransferase COPRO5265_0198 199896 - 200018 + | hypothetical protein TERM 158 200999 - 201011 + GF 76 -7.7 -4.19238 | TCAAGGTAAACCTTT CCACT GCC AGTGG TTTTGACATTAAACG purH 199933 - 201465 + | bifunctional purine biosynthesis protein PurH purD 201501 - 202760 + | phosphoribosylamine--glycine ligase COPRO5265_0201 203275 - 202853 - | molybdopterin-guanine dinucleotide biosynthesis protein B, putative COPRO5265_0202 203820 - 203272 - | hypothetical protein COPRO5265_0203 204646 - 203825 - | D-aminopeptidase superfamily COPRO5265_0204 205728 - 204703 - | hypothetical protein TERM 159 205073 - 205091 + g 70 -2.5 -5.03145 | gap 1, opp_overlap 205073, overlap 205075 205076 GGTCTGTCAATATCA TCTTTCCA GTAT TGGAA-GA TTTTTTGAAGCCTTC TERM 160 206504 - 206516 + G 72 -4.9 -4.62069 | GCAGTGGAACACCTG GTAAA TGT TTTAC TTTTTGGAATAAAAG COPRO5265_0205 205943 - 206539 + | transcriptional regulator, TetR family, putative COPRO5265_0206 206547 - 207542 + | putative dihydroflavonol 4-reductase COPRO5265_0207 207570 - 207824 + | hypothetical protein COPRO5265_0208 207824 - 209077 + | late competence protein COPRO5265_0210 209373 - 210539 + | cysteine desulfurase family protein COPRO5265_0211 210563 - 211192 + | hypothetical protein COPRO5265_0212 211204 - 211554 + | GrdX protein COPRO5265_0213 212730 - 211585 - | glycerate kinase TERM 161 212084 - 212094 + g 88 -8.2 -4.83615 | AGTTTAACCATGTCA GGGG TTG CCCC TTTTTGTGGACCGTA COPRO5265_0214 214131 - 212749 - | GntP family permease TERM 162 213082 - 213107 + g 80 -5.4 -5.00895 | gap 1, opp_overlap 213081 213082, overlap 213083 TATGATGGCACCAAT CCCT-GCCACG TTTCC CGTGGCAAGTG TTTTTATGTAGTCGG TERM 163 213083 - 213105 + g 79 -9.1 -4.12748 | opp_overlap 213082 213081, overlap 213082 ATGATGGCACCAATC CCTGCCACG TTTCC CGTGGCAAG TGTTTTTATGTAGTC TERM 164 214304 - 214289 - H 76 -7.6 -4.12841 | AAAAGTAATCATAAA TGGTCA CGAA TGACCA AAAATGAGCAGGTGA glpR 214321 - 215097 + | transcriptional regulator of sugar metabolism TERM 165 215853 - 215843 - g 80 -6.8 -4.62069 | TCTGGAGGTTAAAAA CACC GTG GGTG CAGGAGATGCCATGG pfkB 215094 - 216017 + | 1-phosphofructokinase COPRO5265_0217 216053 - 216475 + | iiabc fructose/xylitol-pts TERM 166 216917 - 216906 - g 70 -2.2 -4.946 | ACGAAAGAGGAAAAA TCAG AAGC CCGA ACTGGTGTTTACAAA COPRO5265_0218 216552 - 217940 + | pts system fructose-specific eiibbc component (eiibbc-fru) TERM 167 217984 - 218021 + F 86 -11.4 -3.39856 | opp_overlap 217983 217984 217988, overlap 217988 TTACATATTACAAAG GAAAGGGCTGGTGC CAAATTAAGA GTGCCAGCCCTTTC TTAATTGAATGTATG TERM 168 217988 - 218017 + F 72 -6.4 -4.33621 | opp_overlap 217984 217983 217988, overlap 217984 ATATTACAAAGGAAA GGGCTGGTGC CAAATTAAGA GTGCCAGCCC TTTCTTAATTGAATG trxB1 218155 - 219084 + | thioredoxin-disulfide reductase trxA 219098 - 219415 + | thiol-disulfide isomerase TERM 169 219453 - 219475 + G 74 -3.5 -5.00616 | opp_overlap 219458, overlap 219462 GAAACTGGAACTCGG TAACATCTT CATCA AAGATGTGA TTTTTTCCAACGAAA TERM 170 220519 - 220508 - g 77 -7.2 -4.38712 | opp_overlap 220508 CCGACGTGGACAAAA CCGC TGAT GCGG TGGTATCCGTGGGTA COPRO5265_0221 219436 - 220722 + | glycine reductase complex component B subunits alpha and beta (Selenoprotein PB alpha/beta) COPRO5265_0222 220749 - 220874 + | glycine/sarcosine/betaine reductase complex component A1 (Selenoprotein PA 1) (Thioredoxinreductase complex A 1) TERM 171 220982 - 220992 + G 74 -5.4 -4.72272 | overlap 220980 CAACAGTGACCCAGA TGGA GCA TCCA TTTTTGCTGAAACCG COPRO5265_0223 220890 - 221213 + | glycine/sarcosine/betaine reductase complex component A1 (Selenoprotein PA 1) (Thioredoxinreductase complex A 1) TERM 172 221234 - 221220 - f 75 -8.6 -3.77241 | AAATTCTAATGGAAA CACGTT GTG AACGTG GAGAAACTATTTCAG COPRO5265_0224 221280 - 222587 + | glycine reductase complex component B subunit gamma (Selenoprotein PB gamma) TERM 173 222627 - 222598 - T 100 -17.1 -4.01737 | opp_overlap 222598 AGTAAGAAGATTAAA GGGGCGGCTCACC TGTG GGAGAACCGCCCC TTCTTATTGATGTGT TERM 174 222598 - 222627 + T 100 -14.9 -4.02163 | opp_overlap 222598 AGTAAGAAGATTAAA GGGGCGGCTCACC TGTG GGAGAACCGCCCC TTCTTATTGATGTGT COPRO5265_0226 222836 - 222720 - | hypothetical protein TERM 175 223902 - 223887 - g 72 -10.4 -2.89564 | CCCGGAGGTCACAGA GCCAGC TGGC GCTGGC GACGTTCCAAAGTCC COPRO5265_0227 222838 - 224301 + | glycine/sarcosine/betaine reductase complex component C subunit beta (Protein PC beta) TERM 176 224642 - 224615 - g 71 -10.7 -2.65476 | gap 1, overlap 224614 ACCATGCACTACAAT TTCCCACTG-GG TGTTT CCACAGTGGGAA GGCTCATAACGCCAG plsX1 224309 - 225448 + | fatty acid/phospholipid synthesis protein PlsX TERM 177 225576 - 225596 + F 83 -11.1 -3.57144 | ATTGGCCCTCAGGCC CTGGCGCAG GTA CTGCACCAG TTTGAAAATGAAGAA TERM 178 225785 - 225803 + G 76 -8.9 -3.75629 | overlap 225799 TAGCGACATTTACGC CATGGGT GGTGA ACCCATG TTTGCATTGAACGTG selD 225633 - 226544 + | selenide, water dikinase TERM 179 226558 - 226570 + F 75 -5.5 -4.83518 | AGGGCTTACTAAGGG GCGTT AAC AGCGC TTTTGTGTTCTTCTT TERM 180 227267 - 227228 - g 73 -10 -3.32066 | overlap 227232 227233 AAGAAGTGGGCACAA CTAACCGCACCCGTGTAG AAGA CTACACTGGTGCCATTGG CGAAAACACGGGGCT TERM 181 227263 - 227232 - g 70 -9.4 -3.44325 | overlap 227228 227233 AGTGGGCACAACTAA CCGCACCCGTGTAG AAGA CTACACTGGTGCCA TTGGCGAAAACACGG TERM 182 227262 - 227233 - g 71 -10.7 -2.66274 | overlap 227232 227228 GTGGGCACAACTAAC CGCACCCGTGTAG AAGA CTACACTGGTGCC ATTGGCGAAAACACG selA 226606 - 228015 + | L-seryl-tRNA selenium transferase TERM 183 228137 - 228117 - g 81 -3.9 -5.38549 | overlap 228118 228120 CTCAAAGAAGAAAAA CTACGTGGT ATG ACCACGGAC TTAGGCTTTGCCTAT TERM 184 228134 - 228120 - g 73 -10 -3.46107 | overlap 228118 228117 AAAGAAGAAAAACTA CGTGGT ATG ACCACG GACTTAGGCTTTGCC selB 228012 - 229877 + | selenocysteine-specific translation elongation factor COPRO5265_0231 230218 - 229874 - | hypothetical protein TERM 185 229912 - 229901 - G 74 -7.2 -4.36914 | CTGTGGCTTAGAAAA GCCG TCGT CGGC ATAAAAGTAAACTCC TERM 186 229937 - 229924 - G 72 -6.7 -4.26881 | CGGCATAAAAGTAAA CTCCT GAAA AGGAG AGATTGTATTCCCTA COPRO5265_0233 230308 - 231174 + | hydrolase, HAD superfamily COPRO5265_0234 231273 - 231181 - | hypothetical protein COPRO5265_0235 231251 - 231841 + | hypothetical protein TERM 187 231896 - 231933 + GFH 100 -16.5 -3.52093 | opp_overlap 231895 231894, overlap 231905 TGAAACGAACACATT TGTGCAGAGGCTTGATC CCAT GGTCAAGCTTCTGTACA TTCTCGTTGCAGTCT TERM 188 231905 - 231924 + GFH 71 -8.6 -3.56558 | opp_overlap 231895 231894, overlap 231896 CACATTTGTGCAGAG GCTTGATC CCAT GGTCAAGC TTCTGTACATTCTCG COPRO5265_0236 231855 - 232631 + | cobalt ABC transporter permease protein COPRO5265_0237 232574 - 233479 + | cobalt import ATP-binding protein CbiO 1 TERM 189 233499 - 233483 - g 73 -9.5 -3.39005 | CATAGAAGTTGACAA TGTAAGC TTT GCTTACA CAGAAGGAATACCTG COPRO5265_0238 233460 - 234284 + | cobalt import ATP-binding protein CbiO COPRO5265_0240 234284 - 234379 + | hypothetical protein COPRO5265_0239 235162 - 234344 - | probable histidinol-phosphatase (HolPase), putative COPRO5265_0241 236073 - 235159 - | hypothetical protein COPRO5265_0242 236734 - 236057 - | hypothetical protein TERM 190 236914 - 236899 - g 79 -4 -5.22039 | gap 1 TGCAAACCGAAAAAA TGCC-CA GAA TGCGGCA GTACTGGTACTTTTG COPRO5265_0244 236836 - 236946 + | hypothetical protein COPRO5265_0243 238526 - 236943 - | peptidase, M28 family TERM 191 237083 - 237095 + g 79 -2.7 -5.38958 | CTGCTAGTAGAATGT CAAGA TTG TTTTG TTTTTCTTTGTAAGT TERM 192 237965 - 237979 + g 73 -4.2 -4.77896 | CTTCCACATTGTTTT GGCTGT TTA GTAGCC TTTTTAGCTTCCTTG TERM 193 239342 - 239327 - g 72 -5.4 -4.4891 | opp_overlap 239327, overlap 239328 TGTATTACCACAAAA CCAGCA GGGC TGCTGA GCTTATGATGCAACT COPRO5265_0245 238582 - 239769 + | IFN-gamma-induced COPRO5265_0246 239777 - 240997 + | succinyl-diaminopimelate desuccinylase fba 241012 - 241977 + | fructose-1,6-bisphosphate aldolase, class II TERM 194 242000 - 242029 + T 93 -13.5 -2.67803 | opp_overlap 242003, overlap 241997 241996 GTCAAAACAACAAAA AAAGGGGCTCCCC GTAT GGGGAGCCCCTAA TCAATTTCCTAAGCC TERM 195 242026 - 242003 - T 100 -19.6 -6.04419 | opp_overlap 242000 241997 241996 AAAACAACAAAAAAA GGGGCTCCCC GTAT GGGGAGCCCC TAATCAATTTCCTAA COPRO5265_0248 242356 - 242063 - | hypothetical membrane spanning protein COPRO5265_0249 243354 - 242461 - | enoyl-(acyl-carrier-protein) reductase II TERM 196 243014 - 243030 + g 79 -2.9 -5.27938 | GCAGAACCAACCAAA GGCAATA TTT TGATGCC TTTTTCTTTGAGGGT COPRO5265_0250 243815 - 243354 - | (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase) COPRO5265_0251 244045 - 243737 - | hypothetical protein COPRO5265_0252 244544 - 243972 - | RNA polymerase ECF-type sigma factor fabF 245754 - 244534 - | 3-oxoacyl-[acyl-carrier-protein] synthase 2 COPRO5265_0254 245966 - 245751 - | acyl carrier protein (ACP) TERM 197 246093 - 246045 - R 77 -3.8 -5.1675 | overlap 246046 TCACGCAGTAAAAAA GCCTCCGTCTACGTAAATGACT TGCCC AGTCATGAAGGAAGACAGAGGT GAGAGCAAGAAACAG COPRO5265_0255 246704 - 246030 - | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) COPRO5265_0256 247524 - 246685 - | malonyl CoA-acyl carrier protein transacylase COPRO5265_0257 248412 - 247570 - | malonyl CoA-acyl carrier protein transacylase, putative TERM 198 249033 - 249046 + G 72 -8.1 -3.72315 | opp_overlap 249033, overlap 249031 249045 ACAGCCGCCACAGGA GGGCT AATA AGCCC TATTTTAGGTGTGGT moeB 248481 - 249242 + | molybdopterin biosynthesis TERM 199 249503 - 249514 + G 74 -5.8 -4.61162 | TTTTCTGACAGCCAT GCCA TTAA TGGC TTTCTTCTTTGCTCT COPRO5265_0259 249297 - 250490 + | hypothetical sugar symporter TERM 200 250947 - 250960 + G 73 -2.3 -5.1675 | TCTTTGCATTGGTTC CATGG ATTC CCTTG TTTTTTGGTACATCA TERM 201 251553 - 251570 + G 72 -2.7 -5.01535 | gap 1, overlap 251554 251557 TTGGTAGAAAACGTG TCATGTCC TTT GGAC-TGG TTTTTATGCTTCTCG COPRO5265_0260 250664 - 251905 + | sucrose transport protein COPRO5265_0261 252054 - 252155 + | hypothetical protein pepE 252384 - 253112 + | peptidase E TERM 202 253186 - 253129 - f 84 -10.8 -3.71107 | opp_overlap 253132 253163, overlap 253127 253130 253162 253168 TATTAAAATCAAACA CCGGGGACGGTTCTTCTTGTTTGA TTTTCAAACT TCAAACAAAAAGAACCGTCCCTTT GTTTGATTATTTTTA TERM 203 253185 - 253130 - f 95 -14.3 -2.81579 | opp_overlap 253132 253163, overlap 253127 253129 253162 253168 ATTAAAATCAAACAC CGGGGACGGTTCTTCTTGTTTGA TTTTCAAACT TCAAACAAAAAGAACCGTCCCTT TGTTTGATTATTTTT TERM 204 253132 - 253183 + F 100 -19.1 -4.63748 | opp_overlap 253127 253130 253129 253162 253168, overlap 253163 TAAAATCAAACACCG GGGACGGTTCTTCTTGTTTGA TTTTCAAACT TCAAACAAAAAGAACCGTCCC TTTGTTTGATTATTT TERM 205 253163 - 253192 + F 73 -5.1 -4.74161 | opp_overlap 253130 253129 253162 253168, overlap 253132 TTTGATTTTCAAACT TCAAACAAAAAGA ACCG TCCCTTTGTTTGA TTATTTTTATTGTTT TERM 206 254049 - 254083 + G 100 -10.9 -5.04601 | opp_overlap 254037 254049 AGGCTTTTGAGTAAA CCCATAAGAAGTAAG TTTAT TTTACTTCCTATGGG TTTTTAATTTATAGA TERM 207 254083 - 254049 - g 93 -12.4 -3.72695 | opp_overlap 254049, overlap 254037 AGGCTTTTGAGTAAA CCCATAAGAAGTAA GTTTATT TTACTTCCTATGGG TTTTTAATTTATAGA COPRO5265_0263 253971 - 254090 + | hypothetical protein TERM 208 254861 - 254875 + G 82 -7.2 -4.75776 | opp_overlap 254861 TATTTTCTTTTATAA TTGCAA CAG TTGCAA TTTTTAAATTAAATT TERM 209 254878 - 254888 + G 75 -2.6 -5.17353 | GCAACAGTTGCAATT TTTA AAT TAAA TTTTTTCATCGCTGT TERM 210 254986 - 255002 + G 72 -8.1 -3.70902 | opp_overlap 254985 GCTAAAAAAGAATTT TCAGATA GTT TATCTGA TTTGACTGTGCAGAC mdlB1 254446 - 256131 + | ABC-type multidrug/protein/lipid transport system, ATPase component COPRO5265_0265 256249 - 257442 + | hypothetical protein COPRO5265_0267 257444 - 258421 + | glycerophosphoryl diester phosphodiesterase, putative COPRO5265_0266 259066 - 258395 - | thermostable monoacylglycerol lipase (mglp) TERM 211 258443 - 258483 + g 77 -10.4 -3.30159 | gap 1, overlap 258444 CTTAATGATGACTTC AGCTGCCTCAGGGGAAGGC GAAT GTCC-CTCCTGAGGCAGCG TTATGAAGAACTTCG TERM 212 258444 - 258482 + g 83 -13.9 -2.57881 | gap 1, overlap 258443 TTAATGATGACTTCA GCTGCCTCAGGGGAAGGC GAAT GTCC-CTCCTGAGGCAGC GTTATGAAGAACTTC COPRO5265_0268 259785 - 259063 - | thermostable monoacylglycerol lipase (mglp) glpK 259999 - 261495 + | glycerol kinase COPRO5265_0270 261453 - 262943 + | glycerol-3-phosphate dehydrogenase COPRO5265_0271 262949 - 264178 + | sarcosine oxidase alpha subunit COPRO5265_0272 264175 - 264561 + | molybdopterin oxidoreductase, 4Fe-4S cluster-binding subunit COPRO5265_0273 265300 - 264635 - | hypothetical protein rpmB 265774 - 265583 - | ribosomal protein L28 COPRO5265_0275 265900 - 266226 + | hypothetical protein COPRO5265_0277 266231 - 267808 + | DAK2 domain protein TERM 213 269517 - 269537 + G 73 -10.5 -3.09516 | AGCTGTGAAGCGTGA GCTTGATGA AGG TCGTCAAGC TTACGTAGTAGCCCC recG 267805 - 270186 + | ATP-dependent DNA helicase RecG TERM 214 270710 - 270725 + GF 74 -6.8 -4.22948 | opp_overlap 270710 CCCTTGCTTGAGAAA TGGCCG AACT TGGCCA TTTTCCGTACCTTTT COPRO5265_0279 270191 - 271138 + | histidinol-phosphate aminotransferase COPRO5265_0280 271110 - 271631 + | putative N6-adenine-specific methylase COPRO5265_0281 271664 - 272005 + | hypothetical protein pckA 273502 - 272030 - | phosphoenolpyruvate carboxykinase COPRO5265_0283 274638 - 273553 - | hypothetical protein TERM 215 273724 - 273738 + g 82 -2.9 -5.56264 | TTCCACAGTTTCTCC TACAA AGTAC TTGTA TTTTTTGTCTTTACC COPRO5265_0284 275131 - 274673 - | small multidrug export protein COPRO5265_0286 275101 - 275622 + | hypothetical protein COPRO5265_0285 276366 - 275590 - | ABC transporter, ATP-binding protein COPRO5265_0287 277865 - 276366 - | ABC transporter, permease protein TERM 216 277098 - 277085 - G 76 -2.4 -5.39721 | opp_overlap 277087, overlap 277089 CTATTACATAAAAAA CGTA CTTAGC TACG GCACTCAGTTTCTTA COPRO5265_0288 278439 - 277918 - | ABC transporter ATP-binding protein, putative TERM 217 278428 - 278438 + g 72 -5.4 -4.431 | ACGAGCTTTTGGCAA TGGA ACG TCCA TTTTATGCATCAGTC TERM 218 278564 - 278587 + H 100 -17.4 -4.14739 | opp_overlap 278557 GGAGGATAGGGAGGG CGCGGGGCCC GCCT GGGCTCCGCG TTTTACAGTACATCC TERM 219 279058 - 279073 + G 86 -11.8 -3.64703 | opp_overlap 279056 ATATTGGATCTAAGT GCCGGC GGGT GCCGGC TTTCGCTAGCAGAAG COPRO5265_0290 278626 - 279327 + | type IV pilus assembly protein PilZ COPRO5265_0289 279653 - 279306 - | hypothetical protein TERM 220 280381 - 280365 - g 70 -5.1 -4.40605 | overlap 280367 AGGGAGAAATACAAA TCCTCAT CTC AAGAGGA GAGAAATTGGCGCAC COPRO5265_0291 279693 - 280799 + | hypothetical protein COPRO5265_0292 280802 - 281209 + | chemotaxis protein, putative TERM 221 282038 - 282024 - g 79 -2.8 -5.3236 | overlap 282025 AGAAGGGACAAAAAA CCCGAA CTC TTCAGA CAGCTTGGCTCAAGC TERM 222 282990 - 283003 + G 72 -6.7 -4.27861 | opp_overlap 282981 AGGGAATGTGCTTTT GCTCA GAGG TGAGC TTTTGCCTGTGTATT cheA 281215 - 283269 + | chemotaxis protein CheA TERM 223 283331 - 283341 + G 74 -6.8 -4.22009 | ATTGGTACCGGTCAC GCTG TTA CAGC TTTGTCTTCCATGAT cheC 283256 - 283858 + | chemotaxis protein CheC, inhibitor of MCP methylation COPRO5265_0295 283864 - 284334 + | chemoreceptor glutamine deamidase CheD COPRO5265_0296 284337 - 284936 + | RNA polymerase sigma factor for flagellar operon COPRO5265_0297 284936 - 285619 + | flagellar hook-basal body complex protein, putative TERM 224 286264 - 286251 - g 72 -6.7 -4.2558 | CAGTTCTCAGCAAAA GCGTT TCGC AACGC TGACGAGCTAATAGA COPRO5265_0298 285642 - 286307 + | flagellar hook protein FlgE COPRO5265_0299 286312 - 287154 + | hypothetical protein COPRO5265_0300 287200 - 287472 + | hypothetical protein COPRO5265_0301 287459 - 287782 + | hypothetical protein TERM 225 287883 - 287896 + G 72 -5.2 -4.56597 | TACGCCCGGTTATAG CCGC CAAGAA GCGG TTTTTCGCCCAACGC TERM 226 288127 - 288137 + G 79 -2.4 -5.53991 | opp_overlap 288127 TCGGGGCTTCAGAAG GCGC TGA GCGA TTTTTTTGATGCATG TERM 227 288558 - 288529 - g 70 -2.1 -5.04868 | overlap 288543 GTAAATGAAATAAAA GCTATTGACAATG ACCG CCTTATCGACAGC GGGGAAGGTTATAAA flgK 287779 - 289401 + | flagellar hook-associated protein FlgK flgL 289412 - 290473 + | flagellar hook-associated protein 3 csrA 290491 - 290715 + | carbon storage regulator TERM 228 291848 - 291862 + G 76 -2.1 -5.32699 | GGAGCCATTTTTGCG GTCAT AGGAG ATGGC TTTTTTGGTATTTAC COPRO5265_0305 290696 - 292600 + | hypothetical protein TERM 229 292940 - 292953 + G 76 -8.1 -4.15044 | opp_overlap 292939 GAAGAACTTAGAGAG GCCTG GGTT CAGGC TTTCTTCCCCAACGG fliS 292652 - 292975 + | flagellar protein FliS TERM 230 293054 - 293042 - f 71 -4.8 -4.68593 | CCCATTACCTAAAAA CTCC ATGAA GGAG GTAAAGAAACTATGG hag 293066 - 294121 + | flagellin protein TERM 231 294188 - 294148 - f 100 -12.1 -4.88407 | gap 1, overlap 294150 294152 GTATTTAAGCAAAAA CACATTCTGTGGGAGAGC CATTGT GCTCTCCCACAGAAC-TA AATGGGGGAGGTAAG TERM 232 294187 - 294150 - f 100 -15 -4.06004 | overlap 294148 294152 ATTTAAGCAAAAACA CATTCTGTGGGAGAGC CATTGT GCTCTCCCACAGAACT AAATGGGGGAGGTAA TERM 233 294185 - 294152 - f 100 -19.8 -3.61182 | overlap 294150 294148 TTAAGCAAAAACACA TTCTGTGGGAGAGC CATTGT GCTCTCCCACAGAA CTAAATGGGGGAGGT TERM 234 294541 - 294520 - g 71 -3.7 -4.87052 | GATAAAGTAATAAAA GAGGTTCCT ACTG AGAAAGCTC TAGAACTTTACGCTG COPRO5265_0308 294205 - 294603 + | hypothetical protein COPRO5265_0309 294622 - 296004 + | probable flagellar hook-associated protein 2 (filament cap protein), putative COPRO5265_0310 296089 - 296412 + | hypothetical protein COPRO5265_0311 296387 - 296614 + | hypothetical protein COPRO5265_0312 296774 - 296881 + | hypothetical protein COPRO5265_0313 296881 - 297222 + | flagellar basal-body rod protein FlgB flgC 297229 - 297633 + | flagellar basal-body rod protein FlgC COPRO5265_0315 297647 - 297943 + | flagellar hook-basal body complex protein FliE TERM 235 298846 - 298834 - g 86 -4.1 -5.46657 | overlap 298835 CACGGCAACAAAAAA CGTGT CAG ACACA GAAAGTTGGAGCAGC TERM 236 299265 - 299300 + G 76 -4.8 -4.78029 | gap 1 TCTACAGCTACATAG CCATAGC-AGTTGTAGC GTT GCTAATATTGGCTATGG TTTTCATTTTGTTGA TERM 237 299360 - 299331 - g 77 -9.3 -3.8512 | opp_overlap 299333 GACGCAGCAGAAGAA CAGCTCCCGCA CCTGTACC TGCTGGAGCTG GCTTGGGAGAAGCAC TERM 238 299477 - 299465 - g 91 -7.7 -5.09685 | GAAGAGATACAAAAA GCTCT GCA AGAGC ATCCCAATGACGTGG fliF 297968 - 299533 + | flagellar M-ring protein FliF TERM 239 299828 - 299818 - g 73 -4 -4.75954 | AAAAGGCAAAAGAAA TCTT AGA AAGA CTAATGGAAGCGGTT fliG 299541 - 300542 + | flagellar motor switch protein FliG COPRO5265_0318 300520 - 301185 + | hypothetical protein COPRO5265_0319 301151 - 302467 + | flagellum-specific ATP synthase COPRO5265_0320 302451 - 302858 + | hypothetical protein COPRO5265_0321 302855 - 305173 + | hypothetical protein COPRO5265_0322 305200 - 305493 + | basal-body rod modification protein FlgD COPRO5265_0323 305483 - 305845 + | putative flagellar hook associated protein COPRO5265_0324 305933 - 307492 + | flagellar hook protein FlgE TERM 240 307598 - 307561 - g 79 -8.3 -4.29176 | opp_overlap 307564 307568, overlap 307562 AGATCTAATTGAAAA GGCGGAAGAGCGCGGTG ATTT CACCGTGCTCTTCCTGG TTAACGGTCATAAGT TERM 241 307597 - 307562 - g 79 -11.8 -3.16783 | opp_overlap 307564 307568, overlap 307561 GATCTAATTGAAAAG GCGGAAGAGCGCGGTG ATTT CACCGTGCTCTTCCTG GTTAACGGTCATAAG TERM 242 307564 - 307595 + G 100 -21 -2.72661 | opp_overlap 307562 307561, overlap 307568 TCTAATTGAAAAGGC GGAAGAGCGCGGTG ATTT CACCGTGCTCTTCC TGGTTAACGGTCATA TERM 243 307568 - 307591 + G 90 -14.6 -3.27476 | opp_overlap 307562 307561, overlap 307564 ATTGAAAAGGCGGAA GAGCGCGGTG ATTT CACCGTGCTC TTCCTGGTTAACGGT flbD 307499 - 307693 + | hypothetical protein COPRO5265_0326 307684 - 308481 + | chemotaxis protein PomA TERM 244 308542 - 308557 + G 84 -4.8 -5.36965 | TTACGGAGACCTAGT TACTAA CATG TTAGTA TTTTTTGTCATGTTA COPRO5265_0327 308474 - 309187 + | OmpA family protein fliL 309187 - 309633 + | flagellar basal body-associated protein FliL TERM 245 309818 - 309790 - g 72 -8.1 -3.70037 | overlap 309804 TAAGGACCATTCAAA TGCTGCACGAGAA TTT TGCCCGTGGAGCA AGTACGGAGCTTGCA fliM 309633 - 310613 + | flagellar motor switch protein FliM COPRO5265_0330 310620 - 311483 + | flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) COPRO5265_0331 311500 - 311868 + | putative chemotaxis protein CheY COPRO5265_0332 311861 - 312199 + | hypothetical protein COPRO5265_0333 312174 - 312830 + | flagellar biosynthetic protein FliP COPRO5265_0334 312827 - 313090 + | flagellar biosynthetic protein FliQ TERM 246 313667 - 313678 + G 70 -2.2 -5.04325 | gap 1, overlap 313659 313667 TTTCAAAGGGGGCAT C-GGG GTT CCCAG TTTTTGTGGTTTGGA COPRO5265_0335 313072 - 313818 + | bacterial export protein, family 1 COPRO5265_0336 313825 - 314856 + | flagellar biosynthetic protein FlhB TERM 247 316213 - 316203 - g 80 -6.8 -4.62475 | AGTGACAAATTAAAA GCTG AGG CAGC AGGCTTAACAGTTGT COPRO5265_0337 314853 - 316868 + | flagellar biosynthesis protein FlhA flhF 316868 - 317863 + | flagellar GTP-binding protein COPRO5265_0339 317896 - 318714 + | flagellar biosynthesis protein FlhG COPRO5265_0340 318725 - 319774 + | chemotaxis response regulator protein-glutamate methylesterase cheR 319762 - 320526 + | CheR methyltransferase, SAM binding domain COPRO5265_0341 322294 - 320498 - | cell division protein FtsA, putative COPRO5265_0343 323850 - 322291 - | hypothetical protein COPRO5265_0344 324694 - 323864 - | small conductance mechanosensitive ion channel COPRO5265_0345 324794 - 325543 + | zinc (Zn2+) ABC uptake transporter substrate binding protein, putative TERM 248 325680 - 325705 + G 77 -10.5 -3.29947 | opp_overlap 325685, overlap 325683 325685 ACCGAACGGAGCAGG GAAAAGTACGC TGGT GCGTACTCTTC TTGGTCTCATACCTC TERM 249 325700 - 325685 - g 83 -9 -4.21462 | opp_overlap 325685 325683 325680 ACGGAGCAGGGAAAA GTACGC TGGT GCGTAC TCTTCTTGGTCTCAT TERM 250 325685 - 325700 + G 70 -9 -3.47383 | opp_overlap 325685, overlap 325683 325680 ACGGAGCAGGGAAAA GTACGC TGGT GCGTAC TCTTCTTGGTCTCAT zurA 325549 - 326229 + | zinc ABC transporter, ATP-binding protein COPRO5265_0347 326222 - 327007 + | ABC-type Mn2+/Zn2+ transport system, permease component, putative COPRO5265_0348 327112 - 327825 + | ATP-binding transport protein NatA (Na(+) ABC transporter) TERM 251 327880 - 327900 + G 71 -10.5 -2.71681 | opp_overlap 327879, overlap 327885 CCTTCAGGGATAGAC GTACGCTCA TAA TGAGTGTAC TCCTTCCAGCAGTTC TERM 252 328353 - 328375 + G 74 -7 -4.37092 | overlap 328354 TTGGCCTATCTGGTT TCACTGGTCA TGC TTACCAGTGG TTTTGTGGGAAACGT TERM 253 328486 - 328498 + G 71 -7.7 -3.86897 | TCTCTATTGCTATGG GCAAG TGG CTTGC TTTGTCCGCCCTAAA COPRO5265_0349 327822 - 329000 + | putative ABC-type Na+ efflux pump, permease component COPRO5265_0351 329191 - 329556 + | hypothetical protein COPRO5265_0352 329576 - 329791 + | hypothetical protein TERM 254 329825 - 329797 - f 74 -6.8 -4.37971 | AAAAGAGTAGTAAAA GTCTGGCTTCAT CAAAT ATGAAGCGAAAC AAAGGAGGGGAAAAT COPRO5265_0353 329841 - 330119 + | hypothetical protein TERM 255 330169 - 330197 + T 85 -7.3 -4.88407 | opp_overlap 330168, overlap 330170 CTAATACTTGAACAT GGGGAACGCCC CAGTTAA GGGCGCTCCCG TTTTTAGTTGAATAA TERM 256 330170 - 330196 + T 83 -10.8 -3.52321 | opp_overlap 330168, overlap 330169 TAATACTTGAACATG GGGAACGCCC CAGTTAA GGGCGCTCCC GTTTTTAGTTGAATA COPRO5265_0354 331301 - 330201 - | chaperone protein DnaJ TERM 257 330407 - 330417 + g 80 -6.8 -4.66987 | GTGTTCCTGGTTCAA GGAG TAG CTCC TTTTCTTCCCCTGTG dnaK 333121 - 331301 - | chaperone protein DnaK TERM 258 333300 - 333284 - R 70 -8 -3.68836 | ATAGTTATCGAAGAA CGGAAG TATAT CTTCCG AGTAAGCCTCCCTGT TERM 259 333392 - 333370 - R 89 -10.6 -3.95787 | opp_overlap 333370 CACCACACCTACAAA GGGACGGT TACCCCC ACCGTCCC TTTTCTTTTTTATCT TERM 260 333370 - 333392 + r 100 -10.6 -5.51612 | opp_overlap 333370 CACCACACCTACAAA GGGACGGT TACCCCC ACCGTCCC TTTTCTTTTTTATCT COPRO5265_0356 334580 - 333414 - | dihydroorotase COPRO5265_0357 335838 - 334648 - | hypothetical protein COPRO5265_0358 336311 - 335943 - | hypothetical protein TERM 261 335988 - 336008 + g 84 -7.6 -4.73682 | AGATGTCTTTGTCTT GTCCACTT CGTCT AAGTGGGC TTTTCTGTTGTAGCA TERM 262 336452 - 336474 + G 85 -5.4 -5.28166 | overlap 336450 336470 TTATTTCTGATTTCG GGAACCCCAT GGT GTGGGGAACC TTTTTGTTCGTTTTG COPRO5265_0359 336400 - 337020 + | PAP2 superfamily protein TERM 263 337075 - 337062 - g 74 -3.9 -5.09245 | GCAAAAGCACAAAAA GTAAA GTCT TTTAC TGAAGAAGATCGAAG def 337011 - 337526 + | peptide deformylase TERM 264 338233 - 338214 - g 71 -7.2 -4.09864 | overlap 338217 ATGTAGGGGCGAAAA CAACTTTG GGGT CAAAGCTG GTGAAGATTTTCAAA COPRO5265_0361 337523 - 338437 + | methionyl-tRNA formyltransferase TERM 265 338825 - 338841 + G 70 -2.3 -5.06052 | overlap 338827 CTTTTGTTCGCTCTT TTTTGGT GCC ACTAAGA TTTTGTATTTTTTCG TERM 266 339010 - 339030 + G 93 -15.5 -2.76046 | overlap 339008 AGTCTTTGGGCGAAC CGTACCGCA TTT TGCGGTACG TGGTGTTCCACTTGA COPRO5265_0362 338430 - 339062 + | hypothetical protein COPRO5265_0363 339152 - 339685 + | hypothetical protein pkn 339697 - 340338 + | putative serine/threonine protein kinase rsgA 340335 - 341204 + | ribosome small subunit-dependent GTPase A TERM 267 341688 - 341670 - g 76 -4.6 -5.01811 | TGAGCAAAGTAAAAA TGCTTC ATCAGTG GAAGCA AGAACGTGAAGACTA rpe 341201 - 341863 + | ribulose-phosphate 3-epimerase TERM 268 341920 - 341884 - f 79 -11 -3.20751 | gap 1, opp_overlap 341864, overlap 341864 341882 341885 GCTAATAATGCAACA GTCCT-TCTGGCACCCA CATA TGAGTGCCAGAGAGGAG GTAAGGGTATAATGC TERM 269 341919 - 341885 - f 100 -14.5 -2.51969 | gap 1, opp_overlap 341864, overlap 341864 341884 341882 CTAATAATGCAACAG TCCT-TCTGGCACCCA CATA TGAGTGCCAGAGAGGA GGTAAGGGTATAATG COPRO5265_0367 341932 - 342879 + | erythrocyte band 7 integral membrane protein COPRO5265_0368 342863 - 343063 + | hypothetical protein TERM 270 343764 - 343778 + G 78 -6.4 -4.63218 | CCTTTATCCGGCGAA CCAGTT TGT AGCTGG TTTTGTTGGCACGCC COPRO5265_0369 343084 - 344271 + | sugar-binding transport ATP-binding protein COPRO5265_0370 344336 - 345715 + | acetoacetate metabolism regulatory protein AtoC (Ornithine/argininedecarboxylase inhibitor) (Ornithine decarboxylase antizyme) COPRO5265_0371 345699 - 346904 + | bacterial sugar transferase family protein hup 347244 - 346981 - | DNA-binding protein HU TERM 271 347356 - 347375 + r 70 -7.8 -3.60074 | opp_overlap 347331, overlap 347357 ACAGCGATATGAGGG GGCTGTGG ATAA CCACAGCG TTTACAGGCTTTGTA TERM 272 347357 - 347374 + r 81 -11.3 -2.75562 | opp_overlap 347331, overlap 347356 CAGCGATATGAGGGG GCTGTGG ATAA CCACAGC GTTTACAGGCTTTGT COPRO5265_0373 348365 - 347397 - | HD-hydrolase domain containing protein COPRO5265_0374 348924 - 348370 - | putative aldolase class 2 protein YgbL TERM 273 348438 - 348412 - G 80 -12.4 -3.05596 | GATTCGTTCAGCCAA TTCTTCCAGCTG TTG CAACCGGAAGAA CACTTCCCACAAACT udk 349610 - 348921 - | uridine kinase TERM 274 349029 - 349041 + g 71 -7.7 -3.94402 | AGCTTTAATTATGTC CATGG CAA CCATG TTCTTTCCACCTTCT TERM 275 349509 - 349491 - G 70 -8.8 -3.38991 | opp_overlap 349488, overlap 349489 ATCTCTGTAATAAGA GTCCATGC TGA GCATGGTC ACCTGGTCTTTCGGG lap 349718 - 351103 + | aspartyl aminopeptidase TERM 276 351181 - 351151 - T 100 -14 -3.94634 | opp_overlap 351155, overlap 351153 351155 GAGCATGTGAAAGAA GAGAGGAGGGGACC TGT GGTCCCCTCCTTTG TTATTCATGTGTGCG TERM 277 351179 - 351153 - T 100 -16.6 -3.55946 | opp_overlap 351155, overlap 351151 351155 GCATGTGAAAGAAGA GAGGAGGGGACC TGT GGTCCCCTCCTT TGTTATTCATGTGTG TERM 278 351177 - 351155 - T 100 -19.2 -3.35054 | opp_overlap 351155, overlap 351153 351151 ATGTGAAAGAAGAGA GGAGGGGACC TGT GGTCCCCTCC TTTGTTATTCATGTG TERM 279 351155 - 351177 + T 100 -19.2 -4.5032 | opp_overlap 351155 351153 351151 ATGTGAAAGAAGAGA GGAGGGGACC TGT GGTCCCCTCC TTTGTTATTCATGTG COPRO5265_0377 351673 - 351227 - | transcriptional regulator, MarR family, putative COPRO5265_0378 352230 - 351712 - | NADH dehydrogenase (h(2)o(2)-forming nadh oxidase)(nadh:oxygen oxidoreductase) COPRO5265_0379 352311 - 352673 + | conserved Archaeal protein, putative COPRO5265_0380 352692 - 353345 + | nitroreductase COPRO5265_0381 353402 - 353629 + | hypothetical protein COPRO5265_0382 353635 - 354375 + | lipoate-protein ligase A family protein COPRO5265_0383 354366 - 354980 + | hypothetical protein TERM 280 355201 - 355225 + GF 74 -7.9 -4.06687 | TTCTGTCCTGGTTTG TTTGTATGCCG CTT TGGCAAACAAA TTGTTTCTGGAAAGT sfsA 354977 - 355636 + | sugar fermentation stimulation protein COPRO5265_0385 355600 - 356268 + | N-glycosylase/DNA lyase COPRO5265_0386 356819 - 356322 - | hypothetical protein COPRO5265_0387 356914 - 359199 + | putative transketolase pncA 359208 - 359789 + | pyrazinamidase/nicotinamidase COPRO5265_0389 359786 - 360547 + | 23S rRNA methyltransferase nth1 360531 - 361160 + | endonuclease III COPRO5265_0391 361163 - 361633 + | hypothetical protein COPRO5265_0392 361679 - 362410 + | protein of unknown function, putative TERM 281 362467 - 362496 + F 100 -12.9 -5.09259 | opp_overlap 362469 TCACTTGCGGGGGAA GAGGGCGCATGAA AATC TACATGTGCCCTC TTTTGTTTTACAATG COPRO5265_0394 362489 - 363250 + | methyltransferase domain family COPRO5265_0393 363938 - 363237 - | biotin-[acetyl-CoA-carboxylase] ligase COPRO5265_0395 364001 - 365773 + | oligoendopeptidase F TERM 282 365800 - 365788 - T 82 -4.9 -5.30575 | GAAAAAGGTAAAAAA CAAAA GGA TTTTG TGGAGTTTAATAAAG TERM 283 365808 - 365853 + T 100 -20.9 -2.92293 | gap 1, opp_overlap 365815 365818, overlap 365811 365815 GGATTTTGTGGAGTT TAATAAAGAAGGGGAGTCGCTT TAA AAG-GGCTCCCCTTCTTTATTA TGTGCTATTCGCGTT TERM 284 365811 - 365850 + T 100 -18.2 -3.60348 | gap 1, opp_overlap 365815 365818, overlap 365808 365815 TTTTGTGGAGTTTAA TAAAGAAGGGGAGTCGCTT TAA AAG-GGCTCCCCTTCTTTA TTATGTGCTATTCGC TERM 285 365846 - 365815 - T 100 -12.4 -4.1822 | gap 1, opp_overlap 365811 365808 365815, overlap 365818 GTGGAGTTTAATAAA GAAGGGGAGTCGCTT TAA AAG-GGCTCCCCTTC TTTATTATGTGCTAT TERM 286 365815 - 365846 + T 100 -14.6 -4.41716 | gap 1, opp_overlap 365815 365818, overlap 365811 365808 GTGGAGTTTAATAAA GAAGGGGAGTCGCTT TAA AAG-GGCTCCCCTTC TTTATTATGTGCTAT TERM 287 365843 - 365818 - T 79 -8.3 -4.21438 | gap 1, opp_overlap 365815 365811 365808, overlap 365815 GAGTTTAATAAAGAA GGGGAGTCGCTT TAA AAG-GGCTCCCC TTCTTTATTATGTGC COPRO5265_0396 366277 - 365882 - | YvlD TERM 288 366228 - 366257 + g 81 -4.9 -5.19998 | overlap 366250 AACATAACATCACCT CCGCTGGCATATG TTAA CATACGAAAGCGG TTTTCTTTTGGTTGT TERM 289 367245 - 367228 - g 80 -5.5 -5.00616 | overlap 367230 CCGCCGCGCAAAAAA GTGTTCC TAGT GGATCAC AACGAACCTGGACAA COPRO5265_0397 366346 - 367950 + | manganese-dependent inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase) COPRO5265_0398 368100 - 367969 - | hypothetical protein htpX 368918 - 368022 - | heat shock protein, protease HtpX TERM 290 368559 - 368546 - GRH 71 -6.7 -4.12188 | TTAGTATTTTCAAAA TGCCA CGTG TGGCA ACGACCACCGCATGA TERM 291 369305 - 369275 - gR 76 -4 -5.00196 | overlap 369276 TTGGAAATAAGAAAA CTTCGAGGCTCAAT CGA ATTCAGCATCGAAC ATGAGCCCTCTTTGT COPRO5265_0400 369379 - 369284 - | hypothetical protein TERM 292 369349 - 369367 + Gg 74 -11 -2.87132 | opp_overlap 369333 GCTCAGTAAGTTGTG CCACGTGC TTA GTACGTGG TGTATGGAACAAACA COPRO5265_0401 369101 - 369424 + | hypothetical protein TERM 293 369997 - 369981 - gf 88 -10.9 -3.86995 | GGAAATCGATAAGAA CCAACGT CAC ACGTTGG AAGTGGTAACGGACC uvrA 369394 - 372219 + | excinuclease ABC, A subunit TERM 294 372850 - 372831 - g 70 -5 -4.46854 | gap 1, overlap 372827 TCACTGAAGAAGAAA TCGCTCAGC TGT GCC-AGCGA ATTCCCTTAGGCAGG fabG1 372227 - 372973 + | 3-ketoacyl-acyl carrier protein reductase COPRO5265_0403 373428 - 372970 - | hypothetical protein COPRO5265_0405 374258 - 373515 - | hypothetical protein COPRO5265_0406 375502 - 374249 - | hypothetical protein TERM 295 375047 - 375075 + g 72 -9 -3.58208 | gap 1 CCCGTGATTTATCTC CAGAGCTAA-GTC TCCC GGCTTTAGCTCTG TTACTTCTTCTGCGA COPRO5265_0407 377157 - 375550 - | periplasmic sensor signal transduction histidine kinase, putative TERM 296 376417 - 376432 + g 70 -9 -3.36878 | ATTCTTTACCAGTGC CAGTCC CACA GGACTG TTCTCCATAACTGCA TERM 297 376859 - 376879 + g 77 -11.9 -2.83822 | opp_overlap 376848, overlap 376856 GAAAGCCCCAGTGTG GGCATTGCA TTT TGCAGTGCC TGATTGTAAGGTAGC TERM 298 377725 - 377699 - g 83 -8.8 -4.21908 | opp_overlap 377702, overlap 377702 TACCAGCACTGAAAA TAAGGTTGCCTA TGC CAGGCAAGCTTA TAACGATACCGTCAT TERM 299 377722 - 377702 - g 72 -6.1 -4.22883 | opp_overlap 377702, overlap 377699 CAGCACTGAAAATAA GGTTGCCTA TGC CAGGCAAGC TTATAACGATACCGT COPRO5265_0408 377325 - 377864 + | LemA family protein TERM 300 377928 - 377966 + T 100 -18.3 -4.93316 | opp_overlap 377931 377934 TTGTCATGTGCACAG GAAGAAGGGCACCTTCT CCTAA GGAAGGGGCCCTTCTTC TTTTTGCTGTTATTA TERM 301 377963 - 377931 - T 100 -13.5 -3.26471 | opp_overlap 377928, overlap 377934 TCATGTGCACAGGAA GAAGGGCACCTTC TCCTAAG GAAGGGGCCCTTC TTCTTTTTGCTGTTA TERM 302 377960 - 377934 - T 81 -9.4 -3.7732 | opp_overlap 377928, overlap 377931 TGTGCACAGGAAGAA GGGCACCTTC TCCTAAG GAAGGGGCCC TTCTTCTTTTTGCTG COPRO5265_0409 378433 - 377984 - | N-acetylmuramoyl-L-alanine amidase, family 4 COPRO5265_0410 378587 - 378414 - | hypothetical protein TERM 303 378672 - 378643 - R 90 -7.2 -5.14626 | gap 2, overlap 378645 378648 ATCAGTAAAAGAAAA GAGCAGGAGGGAGC TAAA GCCCCCTCCT-C-C AAAAACGTTCTGAAC TERM 304 378672 - 378645 - R 100 -13.4 -4.18807 | overlap 378643 378648 CAGTAAAAGAAAAGA GCAGGAGGGAGC TAAA GCCCCCTCCTCC AAAAACGTTCTGAAC TERM 305 378669 - 378648 - R 100 -13.7 -3.08124 | overlap 378643 378645 TAAAAGAAAAGAGCA GGAGGGAGC TAAA GCCCCCTCC TCCAAAAACGTTCTG COPRO5265_0411 378909 - 378694 - | hypothetical protein COPRO5265_0412 379109 - 378945 - | hypothetical protein COPRO5265_0413 379191 - 379093 - | hypothetical protein TERM 306 379367 - 379350 - R 93 -12.7 -3.05384 | opp_overlap 379348 CGCTTGGCCATTGAA GCTGGGG TAGA CCCCAGC CATCTGTACCGTATC COPRO5265_0414 380968 - 379532 - | conserved carboxylase domain protein TERM 307 381363 - 381394 + GH 72 -3.1 -5.04385 | gap 1 AAAACGAACCAGTGT GGAAGGC-TTGC CAAAATGGT GCAATGTCTTCC TTTTTTACCAGTGTA COPRO5265_0415 381107 - 381661 + | hypothetical protein TERM 308 381936 - 381956 + GT 73 -5.3 -4.652 | overlap 381938 ACTTTACCCTTTTTT GTCAGCACT ACA AGTGCCGCC TTTTTCACATACTTT COPRO5265_0417 381615 - 382505 + | O-antigen polymerase family COPRO5265_0416 382976 - 382473 - | hypothetical protein TERM 309 382621 - 382600 - G 74 -10.9 -2.91199 | gap 1 TAAGCTGGAAGCATA TGC-GTGGGG AGC CCCCACAGCA TGGGTGTAAAAACCC COPRO5265_0419 383310 - 383858 + | hypothetical protein COPRO5265_0420 383887 - 384234 + | membrane protein COPRO5265_0421 384231 - 384890 + | hypothetical protein COPRO5265_0422 385371 - 385279 - | hypothetical protein COPRO5265_0423 384853 - 385491 + | molybdopterin-guanine dinucleotide biosynthesis protein A, putative COPRO5265_0424 385567 - 386025 + | heat shock protein Hsp20 TERM 310 386086 - 386046 - T 80 -11.3 -2.72829 | opp_overlap 386051, overlap 386051 GACACGCTCCTAAAG CAAAAGAGCCGACCC TCAGGATGTCC GGGTCGGCTCTTTTT TATTAGTTGCGACTT TERM 311 386081 - 386051 - T 100 -11.2 -4.54727 | opp_overlap 386051, overlap 386046 GCTCCTAAAGCAAAA GAGCCGACCC TCAGGATGTCC GGGTCGGCTC TTTTTTATTAGTTGC TERM 312 386051 - 386081 + T 100 -11.2 -5.5604 | opp_overlap 386051 386046 GCTCCTAAAGCAAAA GAGCCGACCC TCAGGATGTCC GGGTCGGCTC TTTTTTATTAGTTGC mviN1 387677 - 386103 - | integral membrane protein MviN TERM 313 386533 - 386509 - G 74 -10.2 -3.15574 | overlap 386507 TTAAGTGGAGTAATA TTGTCTTTCT CTGAC AGAAAGACAA TGGCGAGAAGGTTTT COPRO5265_0426 388896 - 387769 - | capsular polysaccharide biosynthesis protein wlaD 389837 - 388893 - | putative glycosyltransferase TERM 314 389006 - 389017 + g 79 -3 -5.44721 | AAGGCAAGATGAATG CAAA GTTC TTTG TTTTTTTAAGATACT TERM 315 389770 - 389780 + g 72 -5.4 -4.44819 | GCACTTTCAATAGCT CTAC ATA GTAG TTTTGGTCTCTTGTA COPRO5265_0428 390992 - 389874 - | glycosyl transferases group 1 COPRO5265_0429 392193 - 391060 - | glycosyl transferase, group 1 family protein TERM 316 393505 - 393487 - gH 76 -9.6 -3.53091 | AGGTGCCGTTGTAAA GGCTACTG ATC CAATAGCC ATTGAAAATGCAAGG COPRO5265_0430 392396 - 393748 + | udp-glucose 6-dehydrogenase (udp-glc dehydrogenase)(udp-glcdh) (udpgdh) (teichuronic acid biosynthesis protein tuad) COPRO5265_0431 393675 - 393788 + | hypothetical protein COPRO5265_0432 393745 - 394683 + | dTDP-glucose 4,6 dehydratase TERM 317 395087 - 395102 + G 72 -3.2 -5.04385 | opp_overlap 395089 GATTGACGGGCAAGG CAGCTC TATA GAACTG TTTTTTCCACCTCTG pssF 394668 - 395711 + | putative glycosyltransferase protein COPRO5265_0434 396281 - 396955 + | UDP-galactopyranose mutase COPRO5265_0435 397060 - 397155 + | hypothetical protein TERM 318 398167 - 398153 - g 73 -4.2 -4.87892 | opp_overlap 398153 TGCTAACAAAAGAAA GCAAAG CGA CTTGGC TTAAGTATGCTGATT glf 397156 - 398295 + | UDP-galactopyranose mutase COPRO5265_0436 398773 - 398276 - | nucleoside diphosphate kinase (NDK) (NDP kinase)(Nucleoside-2-P kinase) TERM 319 398914 - 398888 - g 72 -10.3 -2.89824 | gap 1, overlap 398887 TGACTAACCAAGAAG TGGCTAATCTGC TTAG GCAGATT-GCCA AGATACTGGAAATAA polB 398872 - 400587 + | DNA polymerase beta family COPRO5265_0439 400660 - 401406 + | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (phosphoglyceromutase) (pgam) (bpg-dependent pgam) (dpgm) TERM 320 401483 - 401443 - T 79 -7.6 -4.26189 | opp_overlap 401446, overlap 401444 401446 CCATAAATGTGAAAA GTATGGGCTTCCCAAGAA AACAG TTCCTGCGAAGCCCATTT GTGTTGTGCGTGTGA TERM 321 401482 - 401444 - T 79 -11.1 -3.14991 | opp_overlap 401446, overlap 401443 401446 CATAAATGTGAAAAG TATGGGCTTCCCAAGAA AACAG TTCCTGCGAAGCCCATT TGTGTTGTGCGTGTG TERM 322 401480 - 401446 - T 100 -13.7 -3.1236 | opp_overlap 401446, overlap 401444 401443 TAAATGTGAAAAGTA TGGGCTTCCCAAGAA AACAG TTCCTGCGAAGCCCA TTTGTGTTGTGCGTG TERM 323 401446 - 401480 + T 100 -11.5 -4.28188 | opp_overlap 401446 401444 401443 TAAATGTGAAAAGTA TGGGCTTCCCAAGAA AACAG TTCCTGCGAAGCCCA TTTGTGTTGTGCGTG TERM 324 401491 - 401502 + T 70 -3.6 -4.78157 | GCCCATTTGTGTTGT GCGT GTGA GCGC TTTATTGTTTTTGAT COPRO5265_0440 403006 - 401504 - | copper amine oxidase N- domain family TERM 325 401733 - 401743 + g 89 -4 -5.77734 | overlap 401728 TTAGTTCCTTCCATG GTTA TGG TAAC TTTTTGTTTTTCTTT TERM 326 403094 - 403046 - R 76 -7.6 -4.08216 | gap 1 TTACTTCTTGTAAAA CATGAACAGTGTTTGCGTCATGG AGTC CCA-GACGAAACCAATATTCATG GATCTTGCAACAAAA COPRO5265_0441 406240 - 403031 - | copper amine oxidase domain protein TERM 327 405460 - 405474 + g 72 -6.4 -4.23647 | overlap 405461 CATTTTGAAGCGGGT TCACCA CAG TGGTGG TTTCTTCCATGGTTT TERM 328 405678 - 405707 + g 76 -8.1 -4.13014 | gap 1 TAGCCGTTATTGGGT TGACTGATTTCTAT TAT GTAGAAATC-GTCA TTTTCAGGATCTAGG TERM 329 406314 - 406302 - R 73 -2.6 -5.1675 | TTATGTACTAAAAAA GACC ATTGG GGCC TATTTTATAAACTGT gltX 407769 - 406366 - | glutamyl-tRNA synthetase alaS 410396 - 407766 - | alanyl-tRNA synthetase TERM 330 407849 - 407826 - G 70 -8.8 -3.35996 | CACTGCCACGGACAA GCGAGATGCA TCAG TGCCTCCCGC CTGTACCAGTGTGGG COPRO5265_0444 411471 - 410497 - | polynucleotide adenyltransferase rplM 411461 - 411892 + | ribosomal protein L13 rpsI 411919 - 412320 + | ribosomal protein S9 TERM 331 412325 - 412315 - T 70 -5.4 -4.57353 | CGTCAGTACAGAAAA CGTT AGA AACG CGTTAAAATATTATT TERM 332 412487 - 412465 - T 100 -12 -4.54727 | opp_overlap 412465 CGGCGCAAATTAAAA GGGGCTCC TCTACTG GGAGCCCC TTTCTGCAACTTAAA TERM 333 412465 - 412487 + T 100 -12.7 -3.89614 | opp_overlap 412465 CGGCGCAAATTAAAA GGGGCTCCT CTACT GGGAGCCCC TTTCTGCAACTTAAA COPRO5265_0448 415868 - 412518 - | endoxylanase TERM 334 415278 - 415298 + g 72 -2.6 -5.01845 | overlap 415280 TACAGGAACATAAAT TGCAAGTG CACCC CATTTGTA TTTTTCATTGTTCTC COPRO5265_0449 416182 - 416970 + | hypothetical protein COPRO5265_0450 417155 - 417724 + | acetyltransferase, gnat family TERM 335 417911 - 417926 + GF 78 -9 -3.84451 | TTACCAGTTTGATGT GGAGCA GCCG TGCTCC TTTCCATTTACGCCA TERM 336 418042 - 418025 - gf 74 -7.7 -3.97042 | overlap 418029 TGAGTATGAAGGAAA CATAGGG GTAC CCCCATG GGAAGTAAATCGGAT COPRO5265_0451 417669 - 418943 + | peptidase family M1, putative COPRO5265_0452 419054 - 419587 + | hypothetical protein TERM 337 419651 - 419664 + G 89 -4.5 -5.63236 | TCCGCTTCTATTGCT GGGGA TGAT TCTCC TTTTTGTTTTTGGCT COPRO5265_0453 419595 - 420035 + | hypothetical protein rfbA 420150 - 421022 + | glucose-1-phosphate thymidylyltransferase TERM 338 421498 - 421484 - g 76 -4.2 -5.00616 | opp_overlap 421471 421484 GGGTTTTGGAAAAAA GCTGTT CAA AACTGC TTAGCTCCTTTTTTA COPRO5265_0455 421069 - 421533 + | tRNA-specific adenosine deaminase TERM 339 421647 - 421631 - f 71 -8.7 -3.34013 | GAGCGGCCGAAGGAA CCCGACT GGA AATCGGG TAGGCGGCTAAACCC COPRO5265_0458 421891 - 423459 + | DNA polymerase III, gamma and tau subunit TERM 340 424021 - 424005 - g 89 -11.5 -4.07526 | opp_overlap 424004 424005 AACTACGCAGACAAA GCCACCC TAA GGGCGGC GTTTATAACCAAACA recR 423456 - 424061 + | recombination protein RecR COPRO5265_0460 424054 - 425601 + | R3H domain protein tmk 425603 - 426184 + | thymidylate kinase COPRO5265_0462 426181 - 426507 + | hypothetical protein COPRO5265_0463 426504 - 427202 + | DNA polymerase III, gamma subunit-related protein COPRO5265_0464 427199 - 427996 + | PSP1 COPRO5265_0466 428237 - 428656 + | hypothetical protein smpB 428634 - 429086 + | SsrA-binding protein TERM 341 429282 - 429241 - f 70 -9.5 -2.78712 | gap 1, overlap 429238 TGCTTAATGTAAGCA GCCGCTC-TCCAAACTGAGG CTG CATAAGTTTGGAAGAGCGTC AACCCATGCAGCGGC COPRO5265_0470 429716 - 430084 + | alpha/beta hydrolase TERM 342 430523 - 430511 - g 70 -9.1 -3.45073 | opp_overlap 430511, overlap 430509 430507 ATTGAGGAAAAGAGA GCTGC CTT GCAGC TTATCATGGAACACT TERM 343 430511 - 430523 + G 70 -9.1 -3.40522 | opp_overlap 430511 430509 430507 ATTGAGGAAAAGAGA GCTGC CTT GCAGC TTATCATGGAACACT COPRO5265_0471 430169 - 430639 + | 5-nitroimidazole antibiotic resistance protein COPRO5265_0472 430671 - 431138 + | acetyltransferase, gnat family, putative TERM 344 432180 - 432192 + G 72 -4.8 -4.57837 | GAACGGACTTTACGC GCCT AACCA AGGC TTTTTGCCCAAATAT COPRO5265_0473 431479 - 432333 + | phosphoesterase COPRO5265_0474 433398 - 432346 - | nickel transport protein TERM 345 432677 - 432659 - G 73 -7.4 -4.05033 | CCTACGGCATAGAAA GCGCTG GTACGTG CAGCGC CTAAATAACGCTGTG TERM 346 432964 - 432940 - G 73 -10.1 -3.45134 | CGAACCAAGGGATAA TGTGTAGTTAG CGC CTAACTCCACA GACAAAAGGATGCAT COPRO5265_0475 433584 - 434264 + | conserved Archaeal protein, putative COPRO5265_0476 434313 - 434822 + | chain A, Rubrerythrin From Pyrococcus Furiosus TERM 347 434900 - 434927 + G 90 -15 -2.73542 | opp_overlap 434900 434905, overlap 434905 TTTACCCAGACAATA TGAAAGGGGAGC AGAT GCTCCCCTTTTA TGCTTCAAAGTTCAA TERM 348 434927 - 434900 - g 85 -12.8 -3.33525 | opp_overlap 434900 434905, overlap 434905 TTTACCCAGACAATA TGAAAGGGGAGC AGAT GCTCCCCTTTTA TGCTTCAAAGTTCAA TERM 349 434922 - 434905 - g 95 -12.7 -3.99275 | opp_overlap 434900 434905, overlap 434900 CCAGACAATATGAAA GGGGAGC AGAT GCTCCCC TTTTATGCTTCAAAG TERM 350 434905 - 434922 + G 100 -12.7 -4.5442 | opp_overlap 434905 434900, overlap 434900 CCAGACAATATGAAA GGGGAGC AGAT GCTCCCC TTTTATGCTTCAAAG TERM 351 435247 - 435235 - g 73 -7.7 -4.17132 | AAACCTGGGAAGAAA GCAGT GGA ACTGC GCCATGTCAGCTGGG COPRO5265_0477 434815 - 435549 + | hypothetical protein COPRO5265_0478 435562 - 436368 + | glutamate racemase, putative COPRO5265_0479 436358 - 436783 + | hypothetical protein COPRO5265_0480 436764 - 437660 + | peptidase, M23/M37 family COPRO5265_0481 438403 - 437795 - | methenyltetrahydrofolate cyclohydrolase COPRO5265_0483 438461 - 439474 + | hypothetical protein COPRO5265_0482 440751 - 439438 - | hypothetical protein TERM 352 440586 - 440570 - G 72 -5.1 -4.57569 | GTAGTTTCCCAAAAA CGCTTGT TTA AAAAGCG ACTTTCCATGATTTG phoH 440786 - 441739 + | phosphate starvation-induced protein TERM 353 442298 - 442314 + G 77 -3.6 -5.1244 | TGGAGAAGCATTCTA CCCTGT TGCGT ACTGGG TTTTTATCTTCCTCG COPRO5265_0485 441741 - 443549 + | metal dependent phosphohydrolase COPRO5265_0486 443546 - 443992 + | putative metalloprotease TERM 354 444226 - 444237 + GF 73 -5.8 -4.49337 | TTGCCAAGGATTTAG CAGC GGGT GCTG TTTTGGTTAGTATTG COPRO5265_0487 443949 - 444398 + | diacylglycerol kinase (dagk) (diglyceride kinase)(dgk) cdd 444408 - 444821 + | cytidine deaminase era 444818 - 445717 + | GTP-binding protein Era TERM 355 446055 - 446075 + G 83 -14.1 -2.53876 | overlap 446038 ATTGCCACTCAGGCA GGGCTTTCT TTG AGAAAGCCC TCAATTGGGGTAGCA TERM 356 446088 - 446100 + G 71 -3.4 -4.85267 | CCCTCAATTGGGGTA GCAA AGCGC TTGC TTTTTGGTGATTTAT TERM 357 446306 - 446292 - g 71 -10 -3.12847 | AAGGGCCATAGGGAA CCTGAG CCA CTCAGG TACGTGCACAATGTG COPRO5265_0490 445707 - 446372 + | endonuclease V deoC 446350 - 447009 + | deoxyribose-phosphate aldolase COPRO5265_0492 447026 - 447658 + | hypothetical protein glyQ 447655 - 448530 + | glycyl-tRNA synthetase, alpha subunit glyS 448530 - 450539 + | glycyl-tRNA synthetase, beta subunit TERM 358 451064 - 451043 - g 70 -2.3 -5.04222 | gap 1, overlap 451045 451048 GAAGTAAAGGAAAAA GAGCA-CGTA AAA TACGATGCTG AAGTTTCTGCCGAAG ppdK 450557 - 453223 + | pyruvate, phosphate dikinase TERM 359 453249 - 453271 + T 100 -11.3 -4.84033 | TAACTGAGCTTTGCA GGAGTCACC AATTC GGTGGCTCC TTTTCATTTTTGTCT COPRO5265_0496 455068 - 453299 - | hypothetical protein TERM 360 454594 - 454573 - G 75 -6.7 -4.42386 | gap 1 TGGGTATGGACAAAA GGTA-TGTTC CCT GAACAGTACC CATCTCTCTCACAGA coaD 455238 - 455732 + | pantetheine-phosphate adenylyltransferase ackA 455729 - 456931 + | acetate kinase COPRO5265_0499 457060 - 457416 + | hypothetical protein rpmF 457420 - 457611 + | ribosomal protein L32 TERM 361 457895 - 457913 + GF 74 -8.1 -3.85704 | opp_overlap 457886 457895 TAGAAGGCCTTATAA GCTTCGG CAATA CCGGAGC TTTGGTCATTGGTGG plsX2 457618 - 458613 + | fatty acid/phospholipid synthesis protein PlsX TERM 362 458715 - 458736 + GF 73 -4.4 -4.81851 | TTGGATTTAGTAGAC CTTGCTCT TAGTGT GGAGCAGG TTTTTGGATTTGAAT COPRO5265_0502 458583 - 458831 + | acyl carrier protein COPRO5265_0503 458828 - 459604 + | oxygen-independent coproporphyrinogen III oxidase TERM 363 459696 - 459669 - gf 91 -10.6 -4.20932 | opp_overlap 459666 459669 AAGATGCAGGGAAAA GCTCTTACTCCC GAGC AGGAGGAAGAGC TGCTTTCAAAACTAA TERM 364 459669 - 459696 + GF 73 -9.9 -2.91144 | opp_overlap 459669, overlap 459666 AAGATGCAGGGAAAA GCTCTTACTCC CGAGCA GGAGGAAGAGC TGCTTTCAAAACTAA COPRO5265_0504 459606 - 460475 + | cell division protein FtsY TERM 365 460840 - 460852 + GTF 85 -3.4 -5.48825 | CGTATCTATTGGTCT GATG GTAAA CATC TTTTTTTGGATAATG TERM 366 461052 - 461064 + GTF 79 -7.7 -4.30987 | CTACGTCGCTTCAGG TGCGT TGG ACGCA TTTCTTCTACCACGT COPRO5265_0505 460435 - 461235 + | inositol-1-monophosphatase (IMPase) (Inositol-1-phosphatase) (I-1-Pase) COPRO5265_0507 462266 - 462144 - | hypothetical protein COPRO5265_0508 461582 - 462229 + | hypothetical protein TERM 367 462306 - 462262 - GT 100 -13.9 -3.44051 | gap 2, opp_overlap 462276, overlap 462270 462276 TGCGTAGTAGCATAA GCCATTAAGAAAAAGGGCCCC TTACG GGGGCCCTTTTTCTTA-CG-C TATCCGCACTTGCTA TERM 368 462300 - 462270 - TR 100 -19.9 -3.23979 | opp_overlap 462276, overlap 462262 462276 AGCATAAGCCATTAA GAAAAAGGGCCCC TTACG GGGGCCCTTTTTC TTACGCTATCCGCAC TERM 369 462276 - 462294 + Tr 100 -13.8 -5.09204 | opp_overlap 462270 462262 462276 AGCCATTAAGAAAAA GGGCCCCT TAC GGGGGCCC TTTTTCTTACGCTAT TERM 370 462294 - 462276 - TR 100 -13.1 -5.14163 | opp_overlap 462276, overlap 462270 462262 AGCCATTAAGAAAAA GGGCCCC TTACG GGGGCCC TTTTTCTTACGCTAT COPRO5265_0509 464696 - 462306 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent COPRO5265_0510 465164 - 464703 - | YqeY family protein COPRO5265_0511 465270 - 466898 + | uridine kinase COPRO5265_0512 466976 - 467074 + | hypothetical protein TERM 371 467263 - 467240 - g 73 -7.4 -4.04206 | TTACTGCGACATAAA GGGCAAGCCT CGTC AGGGTTACCC CGTGCAAGAGTTAAA COPRO5265_0513 467082 - 467696 + | redox-sensing transcriptional repressor rex COPRO5265_0514 467761 - 468231 + | ferredoxin domain containing protein TERM 372 468559 - 468548 - g 76 -4.4 -5.00616 | opp_overlap 468548 TTTGCGCGTAAAAAA GATG TTTA CATC GTTGATAAATTTGGC COPRO5265_0515 468242 - 469387 + | exonuclease SbcD TERM 373 470213 - 470202 - g 73 -4.4 -4.81359 | AAGTGAAATAGAAAA GCTT AAGG AAGC AGCTGAACGAGATAC TERM 374 470979 - 470968 - g 70 -2.2 -5.00851 | ATCAATGAAAGAAAA GCCA AACT TGAC AAAGAGGAGATTGAG TERM 375 471867 - 471883 + G 73 -10.9 -2.54617 | overlap 471866 471864 TCTCTCGGATGATTT GAAAGCG GAC CGCTTTC CTGATTTTTACCGTG COPRO5265_0516 469384 - 472302 + | probable DNA double-strand break repair Rad50 ATPase, putative TERM 376 473172 - 473158 - g 80 -7.1 -4.58663 | AGGAGCTTGCAAAAA CTGCC TTTAT GGCAG CTGAAACAGTTTTTT COPRO5265_0517 472326 - 473333 + | hypothetical protein COPRO5265_0518 475346 - 475245 - | hypothetical protein COPRO5265_0519 473323 - 475356 + | hypothetical protein COPRO5265_0520 475423 - 475893 + | hypothetical protein COPRO5265_0521 476525 - 475968 - | hypothetical protein rdgB 476589 - 477200 + | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family TERM 377 477418 - 477407 - g 82 -3 -5.60993 | TGCGTTACAAAAAAA TGAA CGGG TTCA ATGTCTGCTGGGTTC valS 477193 - 479793 + | valyl-tRNA synthetase COPRO5265_0524 479872 - 480561 + | hypothetical protein COPRO5265_0525 480567 - 481097 + | putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase COPRO5265_0526 481094 - 482086 + | MoaA/nifB/pqqE family protein TERM 378 482171 - 482183 + G 77 -3.4 -5.1101 | TAGGATTCTTGCTTG GGAA GTACA TTCC TTTTTTCAATCATGC COPRO5265_0527 482067 - 482231 + | hypothetical protein COPRO5265_0528 482221 - 482331 + | hypothetical protein mreB 482363 - 483370 + | cell shape determining protein MreB COPRO5265_0531 483377 - 484060 + | hypothetical protein COPRO5265_0530 484124 - 484020 - | hypothetical protein COPRO5265_0532 484105 - 484383 + | hypothetical protein COPRO5265_0533 484373 - 486097 + | penicillin-binding protein, putative COPRO5265_0534 486075 - 486776 + | hypothetical protein minD 486755 - 487558 + | septum site-determining protein MinD COPRO5265_0536 487558 - 487815 + | septum site-determining protein TERM 379 488703 - 488716 + G 76 -5.3 -4.82819 | opp_overlap 488703 GTTCCTGATAGTAAG CAGAA AGAG TTCTG TTTTATTGTCCTATG COPRO5265_0538 487812 - 488897 + | Rod shape-determining protein RodA TERM 380 488882 - 488907 + T 71 -8.9 -3.34013 | overlap 488883 TTCTTACAGACCCGA ACCTGAGACCC ATTA GGGTCCCAGGA TTACTTCAGCAGATC TERM 381 488883 - 488906 + T 88 -12.4 -2.60194 | overlap 488882 TCTTACAGACCCGAA CCTGAGACCC ATTA GGGTCCCAGG ATTACTTCAGCAGAT COPRO5265_0537 490102 - 488894 - | zinc protease, putative TERM 382 489392 - 489378 - G 71 -10 -3.28712 | opp_overlap 489377 489388, overlap 489388 CTTGCTGCTTCACAA GCTTGC AAA GCAAGC CTATAATAGGTCTGT COPRO5265_0539 490402 - 490154 - | heat shock protein 15 COPRO5265_0540 491447 - 490389 - | MazG family protein COPRO5265_0541 491532 - 493532 + | V-type H(+)-translocating pyrophosphatase TERM 383 493820 - 493838 + T 71 -6.6 -4.1466 | TGTCGCCAGTGCTGC GGTGGGCT CTT ACCCCGCC TTTTCACCCTTACCT TERM 384 493848 - 493875 + T 82 -7 -4.83243 | overlap 493849 493850 CCCGCCTTTTCACCC TTACCTACCCAA ACAT TTGGGTAGGCGG TTTGTTTTCTGTGGC TERM 385 493849 - 493874 + T 71 -8.3 -3.48861 | overlap 493848 493850 CCGCCTTTTCACCCT TACCTACCCAA ACAT TTGGGTAGGCG GTTTGTTTTCTGTGG COPRO5265_0544 494303 - 493920 - | iojap protein family nadD 494930 - 494349 - | nicotinate (nicotinamide) nucleotide adenylyltransferase COPRO5265_0546 496164 - 494905 - | Spo0B-associated GTP-binding protein TERM 386 496120 - 496100 - G 72 -6.1 -4.30576 | gap 1, opp_overlap 496101 496102, overlap 496102 TTCTCACGACGAAAA GAGGCGGC TCCATC GCCGCC-C TTTCCACCGTAAACA TERM 387 496119 - 496102 - G 79 -9.8 -3.7574 | opp_overlap 496102 496101, overlap 496100 CTCACGACGAAAAGA GGCGGC TCCATC GCCGCC CTTTCCACCGTAAAC rpmA 496424 - 496164 - | ribosomal protein L27 rplU 496751 - 496431 - | ribosomal protein L21 TERM 388 496826 - 496813 - R 76 -9.5 -3.42354 | opp_overlap 496819 GACTCGAACCCACAA GGCCC TTCC GGGCC GCCGGATTTCAAGTC TERM 389 496819 - 496832 + r 70 -8.1 -3.60627 | opp_overlap 496813, overlap 496828 AACCCACAAGGCCCT TCCGG GCCG CCGGA TTTCAAGTCCGGTGC COPRO5265_0550 497570 - 496947 - | hypothetical protein TERM 390 497795 - 497779 - g 73 -2.2 -5.252 | opp_overlap 497780, overlap 497780 CATGGTTAGAAAAAA CGGCAA TAAGC TTGCCT TCTTTTTACTGCTGG TERM 391 497780 - 497794 + G 72 -5.7 -4.49314 | opp_overlap 497780 497779 ATGGTTAGAAAAAAC GGCAA TAAGC TTGCC TTCTTTTTACTGCTG COPRO5265_0551 497765 - 499108 + | carboxyl- protease COPRO5265_0552 499178 - 499942 + | glutamine-binding protein COPRO5265_0553 500020 - 500670 + | glutamine ABC transporter, permease protein COPRO5265_0554 501259 - 500966 - | hypothetical protein TERM 392 501259 - 501271 + Gg 76 -7.7 -4.25283 | CCATGGTAGTGGCCA CCCAT GAA ATGGG TTTTGCTAAGGAAGT COPRO5265_0555 500673 - 501413 + | glutamine transport ATP-binding protein GlnQ COPRO5265_0556 501478 - 502698 + | aminotransferase, class I COPRO5265_0557 502813 - 502700 - | hypothetical protein TERM 393 502754 - 502783 + g 83 -9.1 -4.33165 | overlap 502757 TTTTCTCTCTTCTTT TTTGGGGCCTCGC TCAG GCGAGGCCCCTTC TTTTCGTAGGTTTGC TERM 394 502757 - 502780 + g 100 -19.6 -4.2693 | overlap 502754 TCTCTCTTCTTTTTT GGGGCCTCGC TCAG GCGAGGCCCC TTCTTTTCGTAGGTT COPRO5265_0558 502900 - 503649 + | glucose 1-dehydrogenase II COPRO5265_0559 504369 - 503740 - | phosphate transport system regulatory protein PhoU, putative COPRO5265_0560 505479 - 504406 - | signal transduction histidine kinase yycF 506194 - 505484 - | DNA-binding response regulator YycF COPRO5265_0562 506303 - 507040 + | putative NAD-dependent deacetylase 2 surE 507154 - 507924 + | 5'/3'-nucleotidase SurE COPRO5265_0563 508857 - 507898 - | tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase) COPRO5265_0565 509547 - 508867 - | rhomboid family protein COPRO5265_0566 510316 - 509522 - | periplasmic serine protease COPRO5265_0567 510420 - 510749 + | hypothetical protein atpB 510742 - 511380 + | ATP synthase F0, A subunit atpE 511377 - 511616 + | ATP synthase F0, C subunit TERM 395 512153 - 512134 - g 83 -10 -4.0942 | opp_overlap 512133 512134 TATTGATGAGATAAA GCCCTTGC TTGG GCAAGGAC GTTCATACATCTTTA COPRO5265_0570 511646 - 512380 + | hypothetical protein atpA 512370 - 513851 + | ATP synthase F1, alpha subunit atpG 513829 - 514659 + | ATP synthase F1, gamma subunit TERM 396 514970 - 514985 + GF 86 -10.4 -3.80018 | GTATTCAACGTTCCA CCGCAG GTGA CTGCGG TTCTTCCTGTGTCCA TERM 397 515223 - 515243 + GF 76 -4.8 -4.7373 | gap 1, overlap 515228 TGAGAGAAAGCGGTG TCATGGACC ATTT GGTC-ATGA TTTTTGGTCAGATGA atpD 514649 - 516004 + | ATP synthase F1, beta subunit COPRO5265_0574 515973 - 516341 + | ATP synthase epsilon chain (ATP synthase F1 sectorepsilon subunit) TERM 398 516380 - 516357 - f 71 -4.6 -4.65895 | CCGGCGACTCAAAAA TGCTGTACAT AATC ATGAACAACA GCGTCCCATGATGAG COPRO5265_0575 516419 - 517633 + | molybdenum cofactor biosynthesis protein MoeA TERM 399 518633 - 518623 - g 71 -6.8 -4.04397 | overlap 518624 AGCGGTAGAAAAATA CCCT CTG AGGG AGGAAGTATTGAATT COPRO5265_0576 517630 - 519474 + | molybdenum cofactor biosynthesis protein COPRO5265_0577 519571 - 520509 + | molybdenum cofactor biosynthesis protein MoaA COPRO5265_0578 520569 - 521822 + | folylpolyglutamate synthase/dihydrofolate synthase COPRO5265_0579 521803 - 522321 + | hypothetical protein TERM 400 522731 - 522742 + G 70 -2.2 -4.95806 | TGATTTCCAAGACGG CTAC TACT GTGG TTTTTCTCCTACTTT COPRO5265_0580 522306 - 522875 + | molybdopterin cofactor biosynthesis MoaC region, putative COPRO5265_0582 522868 - 523362 + | molybdenum cofactor biosynthesis protein B glcK 524221 - 523352 - | glucokinase COPRO5265_0583 525462 - 524263 - | malate oxidoreductase TERM 401 525113 - 525140 + g 79 -10.6 -3.58533 | GAAGGTTCAATGGCA CTGAGGAAGGCA AGTA TGGCTTCCTCGG TTTCGGCCCTTATGC COPRO5265_0584 526631 - 525453 - | oxaloacetate decarboxylase beta chain COPRO5265_0585 526693 - 527424 + | nucleotidyl transferase TERM 402 527832 - 527816 - gT 72 -6.5 -4.21194 | overlap 527817 GGTGACTACGTAAAA TCCATGG GAG CCATGGC GCCAATAGGAGTAGT TERM 403 527831 - 527817 - gT 74 -10 -3.12395 | overlap 527816 GTGACTACGTAAAAT CCATGG GAG CCATGG CGCCAATAGGAGTAG COPRO5265_0586 529174 - 528389 - | transglycosylase SLT domain protein COPRO5265_0587 527417 - 528463 + | glycerol-1-phosphate dehydrogenase [NAD(P)] (sn-glycerol-1-phosphate dehydrogenase) (G-1-P dehydrogenase)(Enantiomeric glycerophosphate synthase) COPRO5265_0588 530685 - 529141 - | 2',3'-cyclic-nucleotide 2'-phosphodiesterase, putative TERM 404 529523 - 529539 + gr 73 -2.3 -5.14477 | AAATAATAGTAGCGA GCATT CCATTCC AATGC TTTTTTAAGTGTGTG TERM 405 529795 - 529805 + gr 80 -5.4 -5.00895 | AATGACTTCGTTAAT CCAA TCG TTGG TTTTTCTGTGATCAG COPRO5265_0589 531494 - 530688 - | DegV family protein, putative TERM 406 530754 - 530780 + g 74 -3.6 -5.07486 | opp_overlap 530746, overlap 530745 AAATGCACCCACAAT GGGACTTACTTG CAC CAGGTAGGCGCC TTTTTCTTGCGCGTA COPRO5265_0590 532372 - 531548 - | hypothetical protein asnS 533693 - 532407 - | asparaginyl-tRNA synthetase COPRO5265_0592 534186 - 533758 - | hypothetical protein COPRO5265_0594 534299 - 534850 + | phosphodiesterase YfcE COPRO5265_0593 535895 - 534843 - | L-asparaginase, thermolabile TERM 407 535503 - 535492 - G 72 -5.8 -4.39133 | GAACAATTATGAAAA GCTG GGGT CAGC TCGATGTTGTTCAGC COPRO5265_0595 536130 - 536864 + | radical SAM domain protein COPRO5265_0596 537403 - 536888 - | prokaryotic N- methylation motif domain protein TERM 408 537722 - 537745 + G 81 -5.3 -5.26875 | GCACGACATGTGGCA GTGGGTG CGCATACTTT CACCCAC TTTTTTAATTGAGGA COPRO5265_0597 537669 - 537809 + | hypothetical protein infC 537802 - 538353 + | translation initiation factor IF-3 rpl 538376 - 538504 + | hypothetical protein rplT 538519 - 538872 + | ribosomal protein L20 TERM 409 539035 - 539005 - g 100 -15.5 -4.37092 | opp_overlap 539005 AGCTTTTGGAGAAAA TCCCGACGCTACC ACCTG AGCAGCGTCGGGA TTTTGGTAAGTACGT TERM 410 539005 - 539035 + G 95 -12.6 -4.28548 | opp_overlap 539005 AGCTTTTGGAGAAAA TCCCGACGCTAC CACCTGA GCAGCGTCGGGA TTTTGGTAAGTACGT pheS 538872 - 539891 + | phenylalanyl-tRNA synthetase, alpha subunit TERM 411 540101 - 540089 - g 89 -5.5 -5.64006 | overlap 540090 AGCTAATGAAAAAAA CTCCA GAG CGGAG GTGCATCTGGAAAAC TERM 412 541498 - 541478 - g 79 -12.7 -2.84298 | overlap 541475 CATATCGGACAAGGA TGTGCAGAA CAT TTCTGCACA CATGGGCATAGATGC pheT 539913 - 542306 + | phenylalanyl-tRNA synthetase, beta subunit TERM 413 542834 - 542802 - g 82 -11.3 -3.63707 | opp_overlap 542812, overlap 542803 542808 AAGATAAGTTGCAAA GGGAAATGGACCGCT ACC AGCGGTTCATCTCCG ACAGGTTGGTGGTAA TERM 414 542833 - 542803 - g 87 -14.8 -2.77501 | opp_overlap 542812, overlap 542802 542808 AGATAAGTTGCAAAG GGAAATGGACCGCT ACC AGCGGTTCATCTCC GACAGGTTGGTGGTA TERM 415 542828 - 542808 - g 80 -9.7 -3.84719 | opp_overlap 542812, overlap 542803 542802 AGTTGCAAAGGGAAA TGGACCGCT ACC AGCGGTTCA TCTCCGACAGGTTGG TERM 416 544579 - 544637 + G 83 -9.8 -4.14598 | gap 3, opp_overlap 544587 CTTAAGTACTCATCC CCATG-TAA-GCCGATTCCG-CTTCGCCG AACC CAGCGAAGGCGGAACCAGCGTTACCATGG TTTACTTTAGTTAAG TERM 417 544627 - 544587 - g 100 -17 -3.06183 | gap 1, opp_overlap 544579 CTCATCCCCATGTAA GCCGATTCCGC-TTCGCCG AACC CAGCGAAGGCGGAACCAGC GTTACCATGGTTTAC COPRO5265_0603 542303 - 544651 + | MutS2 protein panD 545044 - 544682 - | aspartate 1-decarboxylase panC 545915 - 545052 - | pantoate--beta-alanine ligase TERM 418 545118 - 545103 - G 74 -5.4 -4.57341 | AACCTTGCCCAAAAA CACTGC CGTG GCAATG ATGATCTTCTGCGGA panB 546929 - 546171 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase COPRO5265_0607 547737 - 546934 - | hypothetical protein TERM 419 547701 - 547688 - G 79 -8.1 -4.2461 | overlap 547696 ATCTTCATTAAGAAA GGAGC AAAG GCTCC CGCCACGCGACCCGC COPRO5265_0608 548254 - 549435 + | hypothetical protein TERM 420 549512 - 549496 - f 88 -10.9 -3.81137 | TGCGAAATATGTAAA GCACGTA AAT TACGTGC ACACGACCCGGAACA COPRO5265_0609 549874 - 551616 + | hypothetical protein COPRO5265_0610 551787 - 551987 + | hypothetical protein TERM 421 554335 - 554325 - g 79 -4 -5.22039 | TGGAAAGGGAAAAAA CAAT AAG ATTG AAATGCAAGAAATGT COPRO5265_0611 552029 - 555418 + | modification methylase, type III R/M system TERM 422 557422 - 557412 - g 74 -5.4 -4.63218 | GGGCGCTGAAGAAAA CATC ATG GATG ACTATTATGGCGAAA TERM 423 558417 - 558435 + G 79 -10.2 -3.65446 | overlap 558415 TTTTCAGCTGGAATG GGCGGGGT TTT ACCCCGAC TTCATTATTTGGTTG COPRO5265_0612 555415 - 558834 + | hypothetical protein TERM 424 558842 - 558825 - f 71 -4.1 -4.79223 | opp_overlap 558827, overlap 558826 558827 CGACAGCAGCAAAAA CGTGTTG TGAA CAACAAG TTCAAAACATTTGGT COPRO5265_0613 558883 - 560190 + | acetamidase/formamidase COPRO5265_0614 561107 - 560283 - | carbohydrate esterase, family 1 COPRO5265_0615 561293 - 562210 + | hypothetical protein rpsF 562357 - 562641 + | ribosomal protein S6 ssb 562645 - 563133 + | prophage L54a, single-stranded DNA binding protein TERM 425 563147 - 563161 + F 71 -10 -2.57795 | opp_overlap 563144 563143, overlap 563144 AGTTTGGACAACTTC GATGCG CTG CGCATC TCAATTGCTCGTGCA rpsR 563226 - 563450 + | ribosomal protein S18 TERM 426 563616 - 563635 + G 79 -11.4 -3.46629 | AAAGGCTATTGTGGA GAGCGGGC TTAT GTCCGCTC TTGCTGTTATATTGG COPRO5265_0619 563584 - 564582 + | hypothetical protein rplI 564589 - 565035 + | ribosomal protein L9 dnaB 565054 - 566424 + | replicative DNA helicase TERM 427 566791 - 566779 - gf 71 -3.4 -4.83269 | opp_overlap 566779 AGAGCAGATGAAAAA GCTA GGTTT TAGC TATGATTGGGACAGA TERM 428 566933 - 566948 + GF 72 -7.6 -3.75292 | CACTGCAAGACGGTA CTTGCT AACG AGCAAG TTATTGATGGTAAAT TERM 429 567355 - 567344 - gf 90 -4.4 -5.63236 | ACGGAAAAAGAAAAA GAAG GTTT CTTC CTTGGCAAGTACGCT TERM 430 568392 - 568376 - gf 83 -8.7 -4.21194 | opp_overlap 568379, overlap 568379 GCTGATGAGGTAAAA GAAGCTG TGG CAGCTCC TATGGGTAAGCTTTT TERM 431 568389 - 568379 - gf 74 -6.8 -4.22883 | opp_overlap 568379, overlap 568376 GATGAGGTAAAAGAA GCTG TGG CAGC TCCTATGGGTAAGCT leuS 566396 - 568912 + | leucyl-tRNA synthetase TERM 432 568953 - 568926 - gf 100 -15.7 -3.06302 | opp_overlap 568926, overlap 568929 AGCAGGTGGATGGAA GAAGGCTGCCA CATGGT TGGCAGCCTTC TTTTTAGTTGGGGCA TERM 433 568926 - 568953 + GF 100 -15.7 -4.8622 | opp_overlap 568926 568929 AGCAGGTGGATGGAA GAAGGCTGCCA CATGGT TGGCAGCCTTC TTTTTAGTTGGGGCA TERM 434 568950 - 568929 - gf 93 -11.6 -3.67775 | opp_overlap 568926, overlap 568926 AGGTGGATGGAAGAA GGCTGCCA CATGGT TGGCAGCC TTCTTTTTAGTTGGG COPRO5265_0623 568870 - 569583 + | ComEA protein COPRO5265_0624 569589 - 571343 + | competence protein ComEC/Rec2, putative COPRO5265_0625 571443 - 572906 + | probable PBP 5 synthesis repressor, putative COPRO5265_0626 572962 - 573408 + | hypothetical protein gyrB 573393 - 575306 + | DNA gyrase, B subunit TERM 435 576788 - 576737 - g 87 -6.8 -5.10077 | AAACATGTGAAAAAA CTGTTTGCTGATCAAAGAAG AACGCTAATTGG ATTCTCGGATCAGCAAACAG AGACGGTACAAGCTG gyrA 575321 - 577597 + | DNA gyrase, A subunit COPRO5265_0629 577617 - 578000 + | hypothetical protein TERM 436 578999 - 578985 - g 70 -2.1 -4.99947 | overlap 578980 GGCAACGAAATAAAA GACAA GATTA CTGTC ATTTACGATGTGGCT TERM 437 579103 - 579083 - g 73 -7.5 -4.053 | overlap 579087 AGTAGTTCACAGAAA GGGAGCAAC TCG GTCGTTCCC TGCGCATCACCCGGA COPRO5265_0630 578043 - 579476 + | replication factor C subunit COPRO5265_0631 579473 - 579889 + | hypothetical protein COPRO5265_0632 579862 - 580419 + | glycoprotease family rimI1 580410 - 580883 + | ribosomal-protein-alanine acetyltransferase gcP 580899 - 581849 + | O-sialoglycoprotein endopeptidase TERM 438 582006 - 581985 - g 75 -2.9 -5.10526 | AGAGGAAAAAACAAA GTCCGGTAT TGTG ATTCCTGAC ACTGCGAAGGAGAAA groS 581920 - 582216 + | chaperonin GroS groL 582234 - 583847 + | chaperonin GroL TERM 439 583890 - 583932 + F 79 -8.4 -4.24123 | opp_overlap 583897, overlap 583892 583893 583897 ATAGTTAAACTGTTT TGAAGAAGGGGGCCTCTC AAAGAGA GAGAGGTCCCCTTCGCTG TTTTAAGGTTGTTGC TERM 440 583892 - 583930 + F 84 -11 -3.71291 | opp_overlap 583897, overlap 583890 583893 583897 AGTTAAACTGTTTTG AAGAAGGGGGCCTCTC AAAGAGA GAGAGGTCCCCTTCGC TGTTTTAAGGTTGTT TERM 441 583893 - 583929 + F 100 -14.5 -2.8169 | opp_overlap 583897, overlap 583892 583890 583897 GTTAAACTGTTTTGA AGAAGGGGGCCTCTC AAAGAGA GAGAGGTCCCCTTCG CTGTTTTAAGGTTGT TERM 442 583925 - 583897 - f 90 -11.7 -3.61894 | opp_overlap 583893 583892 583890 583897 AACTGTTTTGAAGAA GGGGGCCTCTC AAAGAGA GAGAGGTCCCC TTCGCTGTTTTAAGG TERM 443 583897 - 583925 + F 100 -13.9 -3.28785 | opp_overlap 583897, overlap 583893 583892 583890 AACTGTTTTGAAGAA GGGGGCCTCTC AAAGAGA GAGAGGTCCCC TTCGCTGTTTTAAGG COPRO5265_0637 583995 - 584957 + | oligopeptide transport system permease protein AppB COPRO5265_0638 584971 - 586257 + | dipeptide transport system permease protein DppC appD 586268 - 587287 + | oligopeptide transport ATP-binding protein AppD TERM 444 588225 - 588197 - g 77 -10.3 -3.45054 | gap 1, opp_overlap 588196 GTGCAGAACCGATAA GCCCGAGCTACG CGAGGT CG-AGCCCGGGC ATATGGTCGCCTGCC COPRO5265_0640 587280 - 588251 + | oligopeptide transport ATP-binding protein AppF TERM 445 588271 - 588306 + F 85 -4 -5.50723 | TAAGGAGTTTTAAGA GGCACGTTCCTG AACGCTGAAAAA TGGGGACGTGCC TTTTTGTTTTGGTAC COPRO5265_0642 588425 - 588943 + | hypothetical protein lipA 589779 - 588904 - | lipoyl synthase TERM 446 588967 - 588951 - G 71 -9.5 -3.23042 | overlap 588940 AATACTGATCAGCAA GGTAAGA CGA TCTTACC ATGGGGCCAGACACT COPRO5265_0643 589832 - 590413 + | hypothetical protein TERM 447 590477 - 590461 - f 70 -10.1 -2.52676 | GAGTGGCCGAAGGCA CCCGCCT GCT AAGCGGG GGTACGATGTGAGTC TERM 448 590864 - 590908 + F 71 -3.3 -5.06816 | opp_overlap 590856, overlap 590867 TAGAGCATCTGCTTG CCATGCAGAGGGTCGCGGGTT CGA ATCCCGTCTCCCGCTCCATTG TTTTTGTTCCCCAGT TERM 449 591000 - 591014 + F 71 -2.1 -5.16681 | gap 1, opp_overlap 590980, overlap 590980 591001 TTCCCAGTTCAAGTC TGG-GC GCCG GCTCCA TTTTCTTCTTTTTAA argS 591170 - 592750 + | arginyl-tRNA synthetase TERM 450 592759 - 592773 + G 76 -4.3 -5.07486 | GATGTAAAGTGATGA CAAAC ACGAA GTTTG TTTTTGTTACAGGTG TERM 451 594357 - 594334 - g 77 -11 -3.14132 | opp_overlap 594344 594345, overlap 594339 TCTTGGGTTTACTAA GCGAAGCCGT GGCG AAGGCTTCGC CTGTGCTATAATAAC pyrG 592755 - 594368 + | CTP synthase TERM 452 594344 - 594358 + F 72 -10 -2.87468 | opp_overlap 594334 594339, overlap 594345 ACTAAGCGAAGCCGT GGCGAA GGC TTCGCC TGTGCTATAATAACA TERM 453 594416 - 594456 + F 77 -4.6 -5.03314 | gap 1, overlap 594420 CACTCGTTTGGGGTG CGAGTGGTCGGCG-GTTCG AGTC CGCCCGCCCCGACCATTTG TTTTTTGGAGGTGGC TERM 454 594420 - 594452 + F 74 -4 -5.04249 | gap 1, overlap 594416 CGTTTGGGGTGCGAG TGGTCGGCG-GTTCG AGTC CGCCCGCCCCGACCA TTTGTTTTTTGGAGG TERM 455 595540 - 595550 + G 77 -6.8 -4.46212 | GAAGGTTACGGACTG CCCA TGA TGGG TTTTATGCTGGAAGA COPRO5265_0652 594478 - 595719 + | putrescine aminotransferase (Putrescine--2-oxoglutaricacid transaminase) (PATase) (PAT) COPRO5265_0653 595726 - 596163 + | polyketide cyclase/dehydrase superfamily TERM 456 596728 - 596710 - g 75 -3.1 -5.10767 | overlap 596702 CACCGAAGACAAAAA GGTTGTC GGTGT GAGAACC AGTAGCGGCGACTTT COPRO5265_0654 596165 - 597544 + | NAD(FAD)-utilizing dehydrogenase TERM 457 598317 - 598330 + G 78 -6.7 -4.56597 | TGTCGGTAATGGTGC CTTCC CTTC GGAAG TTTTTGGAGAGACCG purA 597535 - 598755 + | adenylosuccinate synthetase COPRO5265_0657 598875 - 600332 + | arginine decarboxylase COPRO5265_0658 600433 - 600744 + | hypothetical protein COPRO5265_0659 600802 - 602598 + | V-type ATP synthase subunit I (V-type ATPase subunit I) COPRO5265_0660 602595 - 603059 + | V-type sodium ATP synthase subunit K (Na(+)-translocating ATPase subunit K) (Sodium ATPase proteolipid component) COPRO5265_0661 603059 - 603604 + | hypothetical protein TERM 458 603763 - 603751 - g 78 -4.8 -5.02502 | opp_overlap 603751 CAGATTACAGAAAAA CCTC CCGAC GAGG CAGCGAATGCATTGT COPRO5265_0662 603601 - 604119 + | hypothetical protein TERM 459 604242 - 604260 + G 73 -9.6 -3.34895 | overlap 604244 CCATATTTTGGCTAG TGCCACTG ACA CAGTGGTA TTGGTTACAGATGGC TERM 460 604244 - 604258 + G 71 -10 -3.24329 | overlap 604242 ATATTTTGGCTAGTG CCACTG ACA CAGTGG TATTGGTTACAGATG COPRO5265_0663 604138 - 604425 + | hypothetical protein COPRO5265_0664 604439 - 606208 + | ATP synthase alpha/beta family, nucleotide-binding domain protein TERM 461 606626 - 606642 + G 84 -8 -4.77036 | GAACACACTGGTACG TGGGCA AAAGC TGCCCA TTTTTAGTGGTAGCG COPRO5265_0665 606201 - 607577 + | V-type ATP synthase beta chain (V-type ATPase subunitB) COPRO5265_0666 607577 - 608209 + | V-type ATPase, D subunit COPRO5265_0667 608209 - 608523 + | hypothetical protein COPRO5265_0668 609611 - 608634 - | 6-phosphofructokinase 1 (Phosphofructokinase 1)(Phosphohexokinase 1) (ATP-PFK) mraZ 609732 - 610169 + | MraZ protein mraW 610166 - 611065 + | S-adenosyl-methyltransferase MraW TERM 462 611078 - 611062 - g 70 -5.1 -4.54727 | TGGGGGAAATGAAAA CTAAGCA GTC TGCTTTG GCTGAGAGGCTGGAG COPRO5265_0671 611055 - 611393 + | hypothetical protein COPRO5265_0672 611396 - 612718 + | MurF, putative COPRO5265_0673 612708 - 613562 + | phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) murD 613556 - 614881 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase COPRO5265_0675 614878 - 615906 + | probable rod shape-determining (roda protein) transmembrane, putative COPRO5265_0676 615908 - 616792 + | UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase COPRO5265_0677 616789 - 617703 + | D-alanine--D-alanine ligase (D-alanylalanine synthetase)(D-Ala-D-Ala ligase) TERM 463 618105 - 618129 + G 75 -6.5 -4.46233 | CTCAAGGCATAACGC CCATTGCTA TTAAGTT TAGCGATGG TTTCTTTGAAGTTAC COPRO5265_0678 617693 - 618286 + | hypothetical protein COPRO5265_0679 618283 - 618972 + | hypothetical protein COPRO5265_0680 618962 - 619606 + | hypothetical protein sbp 619563 - 619970 + | small basic protein TERM 464 620494 - 620482 - g 70 -4.9 -4.44548 | overlap 620476 620485 CATATCCAATGAAAA CATTT TCA AAATG GGTAACTCTGAAATG ftsZ 619970 - 621028 + | cell division protein FtsZ TERM 465 622220 - 622254 + G 72 -6.5 -4.30987 | overlap 622223 CTGCTGGAATTTCCT TTGCCTTTGAGCCTT ACTGG GAGGCTCAAAAGGAA TTTGTTATGAGCCGT COPRO5265_0683 621025 - 622365 + | radical SAM domain protein TERM 466 622899 - 622885 - gf 70 -7.2 -3.86015 | opp_overlap 622884 622885 GAGTGGCGTGACAAA TGCAAA GAT TTTGCA CTTTCATATATTGAT TERM 467 623118 - 623137 + GF 78 -5.8 -4.89393 | gap 1, overlap 623121 AGAAATTGAATACCG TGAGAAGGT TTC ACCTTC-CA TTTTTGTAGCGTTTC ileS 622498 - 625218 + | isoleucyl-tRNA synthetase TERM 468 625276 - 625306 + GF 70 -7.6 -3.58536 | opp_overlap 625282 ATGTGGTCCTAAAGG GAGGAACCTACATT ATC AATGAAGGTGTCTC TTTCGGGGTCAGTTT COPRO5265_0685 625185 - 625571 + | lipoprotein signal peptidase (Prolipoprotein signalpeptidase) (Signal peptidase II) (SPase II) COPRO5265_0686 625535 - 626482 + | ribosomal large subunit pseudouridine synthase D (rRNA-uridine isomerase D) (rRNA pseudouridylate synthase D) serS 626457 - 627713 + | seryl-tRNA synthetase COPRO5265_0688 629219 - 627735 - | soprulation-specific penicillin-binding protein, putative TERM 469 629550 - 629532 - g 72 -8.2 -3.77087 | opp_overlap 629532 GACTGAACATTGAAA TTGTCGAT AGC ACCGACAA TTCTGTTACTCAGAT TERM 470 630156 - 630207 + G 87 -10.4 -4.14633 | opp_overlap 630156 630158, overlap 630156 630157 AGATCACAAAGTTAA GAGATTCCATTGAGGTAAGG TTAATCTAGGCT CCTTACCTCAATGGAATCCG TCTTTTTTCAGGATC TERM 471 630156 - 630209 + G 91 -8.6 -5.04385 | gap 2, opp_overlap 630156 630158, overlap 630156 630157 AGATCACAAAGTTAA GA-G-ATTCCATTGAGGTAAGG TTAATCTAGGCT CCTTACCTCAATGGAATCCGTC TTTTTTCAGGATCTC TERM 472 630206 - 630156 - g 90 -13.7 -3.34856 | gap 1, opp_overlap 630156 630156 630157, overlap 630158 AGATCACAAAGTTAA GAGATTCCATTGAGGTAAGG TTAATCTAGGCT CCTTACCTCAATGGAATC-C GTCTTTTTTCAGGAT TERM 473 630157 - 630206 + G 85 -13.9 -3.08056 | opp_overlap 630156 630158, overlap 630156 630156 GATCACAAAGTTAAG AGATTCCATTGAGGTAAGG TTAATCTAGGCT CCTTACCTCAATGGAATCC GTCTTTTTTCAGGAT TERM 474 630205 - 630158 - g 100 -17.4 -3.23449 | opp_overlap 630157 630156 630156, overlap 630156 ATCACAAAGTTAAGA GATTCCATTGAGGTAAGG TTAATCTAGGCT CCTTACCTCAATGGAATC CGTCTTTTTTCAGGA smbA 629249 - 630184 + | uridylate kinase COPRO5265_0690 631257 - 630223 - | hypothetical protein COPRO5265_0691 631360 - 631686 + | holo-[acyl-carrier-protein] synthase TERM 475 632945 - 632961 + G 100 -13.7 -3.96216 | ATGACTTTGGCTGAT GCAGCCG TAT CGGCTGC TTATTTACATGCAAA COPRO5265_0692 631712 - 633064 + | sugar kinase dnaG 633054 - 634763 + | DNA primase (bacterial type) TERM 476 635025 - 635009 - g 93 -9.5 -4.72272 | TTCCTCGAGGAAAAA GGGATAA GTA TTATCCC TGAGGAGCCCAGAAT TERM 477 635205 - 635191 - g 70 -2.1 -4.93318 | gap 1 GAGAATTGAGAAAAA CGATGC TGCA GCA-CG TGAGGAGCTTATTAA TERM 478 635653 - 635634 - g 71 -10.8 -2.705 | overlap 635631 ATCAAGATGACAGCA GGGTACAA GATT TTGTACCC GATACGGGTGAAGGA COPRO5265_0694 634844 - 635926 + | RNA polymerase sigma factor RpoD (Sigma-A) (Sigma-43) TERM 479 636981 - 636967 - g 70 -10 -3.00704 | ATTCCTCAAATCAGA GCCATG TTC CATGGC GAGATGCAAAGAAAA uvrB 635926 - 637881 + | excinuclease ABC, B subunit COPRO5265_0695 637985 - 637878 - | hypothetical protein TERM 480 638020 - 637999 - H 71 -8.8 -3.32066 | AATAATGTGGTATAA TGTCAACC TGAAAT GGTTGACA AGGAAAAAGTAGATC COPRO5265_0697 638011 - 638310 + | hypothetical protein COPRO5265_0698 638312 - 639616 + | signal recognition particle protein rpsP 639632 - 639877 + | ribosomal protein S16 COPRO5265_0700 639892 - 640296 + | hypothetical protein COPRO5265_0701 640289 - 640771 + | hypothetical protein trmD 640768 - 641538 + | tRNA (guanine-N1)-methyltransferase COPRO5265_0703 641522 - 642100 + | tRNA (guanine-N(1)-)-methyltransferase (M1G-methyltransferase) (tRNA [GM37] methyltransferase) rplS 642118 - 642474 + | ribosomal protein L19 lepB 642477 - 643004 + | signal peptidase I rnhB 643004 - 643612 + | ribonuclease HII COPRO5265_0707 643593 - 643940 + | conserved hypothetical protein TIGR00252 COPRO5265_0708 643915 - 645339 + | Mg chelatase, subunit D/I family protein COPRO5265_0709 645336 - 646109 + | DNA processing chain A TERM 481 647076 - 647093 + GF 100 -8.5 -5.13741 | opp_overlap 647061 647058, overlap 647068 647067 TCTTCAAGCAGTTAC CTGCATT TAAG AATGCAG TTTTTGTTAGGTTAG COPRO5265_0710 646193 - 647491 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid COPRO5265_0711 647460 - 648320 + | tyrosine recombinase XerC TERM 482 648450 - 648466 + G 100 -12.3 -5.1861 | opp_overlap 648450 CCATGTTTGCAGACA CCCTGGT TAC ACCAGGG TTTTTTAATGCTCAC TERM 483 648466 - 648450 - g 79 -12.3 -2.87564 | opp_overlap 648450 CCATGTTTGCAGACA CCCTGGT TAC ACCAGGG TTTTTTAATGCTCAC TERM 484 648690 - 648674 - g 78 -6.5 -4.57073 | TACTTTTGGGAAAAA GCTACCC TGG AGGCAGC TGAAAAGGTGGGAAT TERM 485 649035 - 649055 + G 72 -8.3 -3.83226 | overlap 649037 CAGAGAAAGATTTGT CTTTCTTGG GGA CCAAGAATG TTGTTGTGGCTCATT TERM 486 649037 - 649053 + G 75 -9.5 -3.49568 | overlap 649035 GAGAAAGATTTGTCT TTCTTGG GGA CCAAGAA TGTTGTTGTGGCTCA COPRO5265_0712 648317 - 649573 + | amidohydrolase family, putative TERM 487 649627 - 649610 - g 72 -8.5 -3.76224 | CTGGTATCTATCAAA TTGAAGG GGTT CCTTCAA CAGAAATTAGTGTGA COPRO5265_0713 649570 - 650319 + | methylthioadenosine phosphorylase rpiB 650341 - 650802 + | ribose 5-phosphate isomerase B glyA2 650803 - 652050 + | serine hydroxymethyltransferase TERM 488 652236 - 652214 - gf 100 -13.4 -3.64162 | opp_overlap 652214 AGCAAGTAGTGGAAA CCCCGTTGGC TAC GACAACGGGG TTTGTTCTGTGTAGG TERM 489 652214 - 652236 + GF 100 -13.4 -4.42974 | opp_overlap 652214 AGCAAGTAGTGGAAA CCCCGTTGGC TAC GACAACGGGG TTTGTTCTGTGTAGG upp 652051 - 652668 + | uracil phosphoribosyltransferase TERM 490 652840 - 652856 + GF 78 -5.1 -5.07652 | overlap 652841 GGCAGTAGTACTGGC CTTCACC TTG GGTGAAC TTTTGTTTTGGCACG TERM 491 652841 - 652855 + GF 73 -8.6 -3.63868 | overlap 652840 GCAGTAGTACTGGCC TTCACC TTG GGTGAA CTTTTGTTTTGGCAC TERM 492 652900 - 652915 + GF 79 -3.2 -5.28942 | overlap 652900 GGGCTACGGTGTACT CATCAC AGTG GTGTTG TTTTTCTTTGCCATG COPRO5265_0717 652637 - 653608 + | probable undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphatetransferase (UDP-GlcNAc:undecaprenyl-P GlcNAc 1-Ptransferase) TERM 493 654575 - 654560 - g 82 -2.6 -5.5112 | CTGACGAAGAAAAAA TAAAAG AATA CTTTCA TTTTGTGGTTCAGAA COPRO5265_0718 653596 - 654726 + | UDP-N-acetylglucosamine 2-epimerase TERM 494 654990 - 655014 + GF 78 -6.3 -4.63486 | overlap 655012 CTTACCCACACGGGA GCAGGGTCCAT AAG AGGGTCTCTGC TTTTCTTAGGAGCAT murA 654732 - 656009 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase COPRO5265_0720 655984 - 656313 + | hypothetical protein TERM 495 656883 - 656867 - g 72 -6.5 -4.26189 | opp_overlap 656877 TCACAAATGGGAAAA CTTGGAC GTA GACCAAG TAGATGGTAACATGG COPRO5265_0721 656310 - 657302 + | pyruvyl-transferase polA 657299 - 658411 + | DNA polymerase I COPRO5265_0723 658417 - 658971 + | dephospho-CoA kinase (Dephosphocoenzyme A kinase), putative COPRO5265_0724 658940 - 659443 + | methylated-dna--protein-cysteine methyltransferase (6-o-methylguanine-dna methyltransferase) (mgmt) (o-6-methylguanine-dna-alkyltransferase) TERM 496 660234 - 660221 - gf 75 -2.3 -5.26316 | overlap 660223 CCAGCTTACAAAAAA TGGCC ACAA GGTCA TCACGTGGCACCGCG COPRO5265_0725 659400 - 660269 + | putative ATPase COPRO5265_0726 660403 - 661089 + | hypotheical protein, putative COPRO5265_0727 661136 - 662080 + | DNA-directed RNA polymerase sigma-54 factor, putative gap 662157 - 663167 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 497 664115 - 664126 + G 80 -7.2 -4.56597 | overlap 664118 CAGTCTTTTGGAACG GCCC TTTG GGGC TTTTTGAGGACGCAA pgk 663169 - 664350 + | phosphoglycerate kinase TERM 498 664429 - 664474 + G 79 -8.4 -4.33274 | gap 2, opp_overlap 664437, overlap 664430 664435 664437 ACGTAAACAAACTTT TG-GGAGA-AGTGCGGCCTGCG TCAG TGCAGGTCGCACTCTTTCCTCC TTTTACTGCTCTAAG TERM 499 664430 - 664471 + G 100 -15.9 -3.15364 | opp_overlap 664437, overlap 664429 664435 664437 CGTAAACAAACTTTT GGGAGAAGTGCGGCCTGCG TCAG TGCAGGTCGCACTCTTTCC TCCTTTTACTGCTCT TERM 500 664435 - 664466 + G 95 -13 -3.93659 | opp_overlap 664437, overlap 664430 664429 664437 ACAAACTTTTGGGAG AAGTGCGGCCTGCG TCAG TGCAGGTCGCACTC TTTCCTCCTTTTACT TERM 501 664464 - 664437 - g 81 -12.7 -3.2964 | opp_overlap 664435 664430 664429 664437 AAACTTTTGGGAGAA GTGCGGCCTGC GTCAGT GCAGGTCGCAC TCTTTCCTCCTTTTA TERM 502 664437 - 664464 + G 100 -15.6 -3.54516 | opp_overlap 664437, overlap 664435 664430 664429 AAACTTTTGGGAGAA GTGCGGCCTGCG TCAG TGCAGGTCGCAC TCTTTCCTCCTTTTA TERM 503 664480 - 664492 + G 76 -7.7 -4.28977 | TCTTTCCTCCTTTTA CTGCT CTA AGCAG TTTTCAATATCTTGT tpiA 664356 - 665075 + | triose-phosphate isomerase secG 665094 - 665312 + | preprotein translocase, SecG subunit rpsO 665412 - 665681 + | ribosomal protein S15 TERM 504 666869 - 666859 - g 71 -6.8 -4.18197 | opp_overlap 666859 ACTGGTGAGGTAAAA CCAC GCC GTGG TCCTTCAAGGAGAGA TERM 505 667114 - 667101 - g 72 -8.1 -3.79874 | TTTGATAGAATACAA CGACG AGAA CGTCG TGCTAACGGATATCC pnp 665683 - 667776 + | polyribonucleotide nucleotidyltransferase COPRO5265_0734 667789 - 668349 + | DNA polymerase, bacteriophage-type COPRO5265_0735 668352 - 670001 + | metallo-beta-lactamase family protein mscL 670062 - 670445 + | large conductance mechanosensitive channel protein COPRO5265_0737 670819 - 670472 - | cupin region TERM 506 671198 - 671170 - g 74 -6.8 -4.32201 | gap 1, overlap 671172 671173 GCAAGGAAGGTAAAA CAGTGCTCTTCGT TGGG ACGAAGAG-ACAG GCTCAAGAACCCATT TERM 507 671435 - 671454 + G 72 -2.8 -4.9218 | opp_overlap 671435 CGGGGTAAAAGATAT GGATACCC TGCC GGATATTC TTTTTGTAGTAGATA rpsB 670974 - 671780 + | ribosomal protein S2 tsf 671782 - 672375 + | translation elongation factor Ts TERM 508 672454 - 672430 - g 83 -13 -3.18264 | opp_overlap 672430 GTGGTGAGTTACTAA GCGGAGAAAA TGGTG TTTTCTCCGC TTCTTATTTAAACGA TERM 509 672430 - 672454 + G 100 -13.7 -4.08557 | opp_overlap 672430 GTGGTGAGTTACTAA GCGGAGAAAAT GGT GTTTTCTCCGC TTCTTATTTAAACGA COPRO5265_0740 672375 - 673112 + | uridylate kinase (UK) (Uridine monophosphate kinase) (UMPkinase) TERM 510 673569 - 673553 - g 78 -5.2 -4.94109 | GAAAAGAAAAAAGAA CTTTCA GAAGA TGAAAG TAGGCGTATCCAGAA frr 673109 - 673669 + | ribosome recycling factor cdsA 673829 - 674449 + | phosphatidate cytidylyltransferase COPRO5265_0743 674440 - 675525 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXPreductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) COPRO5265_0744 675522 - 676532 + | putative zinc metalloprotease TERM 511 677220 - 677249 + G 82 -11.5 -3.48395 | gap 1, opp_overlap 677228 CCTTGAAGGTATTGG GGACACAATCAGGG TTT CCCTGAATG-GTCC TTCTGTAGACGAAGT TERM 512 677242 - 677228 - g 75 -10 -3.48924 | opp_overlap 677220 GTATTGGGGACACAA TCAGGG TTT CCCTGA ATGGTCCTTCTGTAG ispG 676537 - 677610 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 513 678023 - 678044 + G 72 -8.1 -3.69354 | gap 1, opp_overlap 678023 678022 AATTCAGACAAAATT TCGT-GACGA GCC TCGTCCACGA TTTGGCCTTATAAGA TERM 514 679134 - 679148 + G 71 -10 -3.19293 | GTTAAATTCGTAGAT GCCGAT CTT ATCGGC TTCCCTGTTCGCCTT proS 677607 - 679283 + | prolyl-tRNA synthetase COPRO5265_0747 679280 - 679918 + | glycosyltransferase TERM 515 679899 - 679939 + T 86 -7 -5.00765 | gap 2, opp_overlap 679896 679899, overlap 679901 TGGCTTATAAACTTA GAGGGAGACCC-ACC-ATAT AAC ACATCGGTTGGGTCTCCCTG TTTTTCTCATTGATT TERM 516 679901 - 679937 + T 85 -9.6 -4.11322 | gap 2, opp_overlap 679899 679896, overlap 679899 GCTTATAAACTTAGA GGGAGACCC-ACC-ATAT AAC ACATCGGTTGGGTCTCCC TGTTTTTCTCATTGA COPRO5265_0748 680241 - 679978 - | stage V sporulation protein S COPRO5265_0749 680765 - 680304 - | hypothetical protein TERM 517 680885 - 680901 + G 75 -2.9 -5.1675 | GGGAAGCTTAGTGAT CTGCTTT TGA ATAGCGG TTTTTTGGTAGATGA COPRO5265_0750 680810 - 681394 + | hypothetical protein lexA 682024 - 681428 - | LexA repressor TERM 518 682383 - 682405 + G 88 -7.7 -5.06103 | GCAAATGATGTAAGG GTTGCTGGC GGAGA GCCAGTAGC TTTTTTGGCAGTTCT COPRO5265_0753 682167 - 683099 + | hydrogenase expression/formation protein HypE, putative COPRO5265_0754 683251 - 683433 + | hypothetical protein rpsT 683580 - 683846 + | ribosomal protein S20 COPRO5265_0756 683904 - 684086 + | hypothetical protein TERM 519 684080 - 684103 + F 100 -15.4 -4.67641 | overlap 684101 GGGAGCAATTAGTCG GGAATGAGGC TTCG GCCTCATTCC TTTTACTTTTAGAAT dcd 684123 - 684683 + | deoxycytidine triphosphate deaminase glmU 684690 - 686039 + | UDP-N-acetylglucosamine pyrophosphorylase COPRO5265_0759 686039 - 686989 + | putative ribose-phosphate pyrophosphokinase COPRO5265_0760 687013 - 687648 + | ribosomal protein L25, Ctc-form TERM 520 688169 - 688187 + G 71 -3.8 -4.7416 | overlap 688171 CTGACCAGTTATGTT TGCTGATC ACT GATCGGAA TTTTTCACGTTTTCA pth 687664 - 688242 + | peptidyl-tRNA hydrolase COPRO5265_0762 688373 - 690922 + | transcription-repair-coupling factor (trcf) (ATP-dependent helicase mfd), putative TERM 521 691977 - 691966 - g 72 -5.8 -4.42238 | TTACGGCAAGGAAAA CTGC AAAA GCAG TTAAAATTAGCTAAT hisS 690898 - 692118 + | histidyl-tRNA synthetase aspS 692111 - 693838 + | aspartyl-tRNA synthetase rpoF 694163 - 694894 + | RNA polymerase sigma-37 factor TERM 522 695125 - 695136 + G 76 -2.2 -5.42131 | TGTTGCTTATAGGAT TGGG GATA TCCA TTTTTTATCTAATTC COPRO5265_0766 694887 - 695912 + | hypothetical protein COPRO5265_0767 695909 - 696322 + | hypothetical protein COPRO5265_0768 696309 - 696599 + | hypothetical protein TERM 523 696674 - 696716 + G 95 -14.3 -3.54475 | TAGGAAAAGCTGATG TAGGCGTTGTACAGACTTT GATTG AAGGGCTGGACAACGCCTA TTCTATGATGGGGAC COPRO5265_0769 696637 - 696870 + | hypothetical protein gspE 696873 - 697916 + | GspE protein pilT 697903 - 698964 + | twitching motility protein PilT COPRO5265_0772 698948 - 699964 + | bacterial type II secretion system protein F domain COPRO5265_0773 699969 - 701006 + | proline dipeptidase efp 701033 - 701593 + | translation elongation factor P COPRO5265_0775 701596 - 701889 + | hypothetical protein COPRO5265_0776 701876 - 702322 + | hypothetical protein TERM 524 702440 - 702456 + GF 100 -8.7 -4.67904 | opp_overlap 702439 702440, overlap 702441 TATGGTGGAGATAAC TTTGGGC ATA GCCCAAG TTTTTGACCTTGATC TERM 525 702441 - 702455 + GF 76 -10 -3.40019 | opp_overlap 702439 702440, overlap 702440 ATGGTGGAGATAACT TTGGGC ATA GCCCAA GTTTTTGACCTTGAT TERM 526 703136 - 703118 - gf 70 -5.9 -4.30719 | overlap 703120 CTTCTTGACAAGAAA GGGCGCA GGCTA TGAGCCC GCAGAAAAGTCTCCG TERM 527 704134 - 704114 - gf 71 -9.8 -2.70932 | TCGCCCGCTGAAGCA GGCGAAAA CGGGC TTTTCGCC ATCAGAACCTTCTGT dxs 702294 - 704183 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 528 704191 - 704226 + F 85 -2 -5.85244 | gap 1, overlap 704193 CAAGCTAGGTAGATC CTTTTTCATTTAT-CAC AAC GTGCATGAGTGAGAATG TTTTTTGTTTTCCTT TERM 529 704436 - 704452 + G 73 -10.9 -2.66326 | opp_overlap 704434, overlap 704433 TGGTGATGGAACATT TTTGCGC ACG GCGCAAA TGGCTTTCACATTCA COPRO5265_0778 704263 - 705081 + | inorganic polyphosphate/ATP-NAD kinase, putative TERM 530 706082 - 706063 - gf 100 -9.3 -4.65838 | GAGAGATGCTAAAAA GCCAGCT TATTGC AGCTGGC CTAGAGTTAGCTAAA TERM 531 706542 - 706532 - gf 74 -5.4 -4.64861 | GCGTGTTAAAATAAA CTTG TTG CAAG GTCAAAGGAGGATCC COPRO5265_0779 705066 - 706679 + | RecF/RecN/SMC N domain, putative buk1 706645 - 707745 + | butyrate kinase ptb1 707747 - 708640 + | phosphate butyryltransferase TERM 532 708828 - 708811 - g 72 -4.8 -4.6902 | TCAGAAGTGGAAAAA GCCGTA GAAAAG CACGGC AGTGATTTGAATACC TERM 533 709302 - 709286 - g 75 -10.1 -3.56092 | CTATGAGCCCTGAAA GAGCAGG GAC CCTGCCC ATCATGAAACTGGCA TERM 534 709591 - 709618 + G 77 -3.4 -5.20333 | gap 1 TTAGTTGACTTTATT CAGGAAAGAGTCC TCT GGA-TCGCTCCTG TTTTTGTTGTGCCTG buk2 708640 - 709710 + | butyrate kinase TERM 535 710291 - 710306 + G 73 -7.6 -4.11216 | opp_overlap 710290 710291 AAAGAGGTCGAGAAG GTGGTA GATT TACCAC TTTTCCCAATAAGAA COPRO5265_0783 709712 - 710344 + | hypothetical protein COPRO5265_0784 710349 - 710582 + | hypothetical protein COPRO5265_0785 710579 - 711634 + | ketoisovalerate oxidoreductase subunit VorB (VOR) (2-oxoisovalerate oxidoreductase beta chain) (2-oxoisovalerate ferredoxinreductase subunit beta) COPRO5265_0786 711640 - 712392 + | ketoisovalerate oxidoreductase subunit VorA (VOR) (2-oxoisovalerate oxidoreductase alpha chain) (2-oxoisovalerateferredoxin reductase subunit alpha) COPRO5265_0787 712389 - 712937 + | ketoisovalerate oxidoreductase subunit VorA (VOR) (2-oxoisovalerate oxidoreductase alpha chain) (2-oxoisovalerateferredoxin reductase subunit alpha) TERM 536 712984 - 713014 + GF 86 -9 -4.29106 | overlap 712985 712988 GAGAAATATGAAGTT GTAAGGCGCCCA GCAGCTG TGGGCGCCTTGG TTTATTGGTGTAGCC TERM 537 712985 - 713013 + GF 93 -12.5 -3.16982 | overlap 712984 712988 AGAAATATGAAGTTG TAAGGCGCCCA GCAGCTG TGGGCGCCTTG GTTTATTGGTGTAGC TERM 538 712988 - 713010 + GF 93 -12 -3.71527 | overlap 712985 712984 AATATGAAGTTGTAA GGCGCCCA GCAGCTG TGGGCGCC TTGGTTTATTGGTGT COPRO5265_0788 712930 - 713415 + | nudix hydrolase xerD 713325 - 714194 + | site-specific integrase/recombinase XerD protein TERM 539 714301 - 714317 + G 73 -2.2 -5.24129 | opp_overlap 714307 CTTCACGTCATCGAC GACAGA CCTGC TCCGTC TTTTTTGTGGAGCAG TERM 540 714488 - 714510 + G 72 -9.2 -3.5764 | CCTATCCCCATGGTT TTCCTCCAGA GGT TATGGAGGAA TTTGAACGTAGAATT deoB 714169 - 715350 + | phosphopentomutase COPRO5265_0791 715368 - 716174 + | purine nucleoside phosphorylase I, inosine and guanosine-specific TERM 541 716892 - 716874 - g 79 -10.4 -3.65426 | overlap 716866 GTAGAAAGGTGGAAA TTCATGTC ACC GACATGAA TGAACCACTGGGATG pdp 716174 - 717463 + | pyrimidine-nucleoside phosphorylase TERM 542 719034 - 719050 + G 71 -9.5 -3.21772 | overlap 719032 GCCATAGCTTTGCAG CTTACAC CTG GTGTAAG TATTCTGGACCCATT COPRO5265_0793 717471 - 719588 + | polyA polymerase family protein, putative trpS 719635 - 720615 + | tryptophanyl-tRNA synthetase COPRO5265_0795 720612 - 721778 + | cytidylate kinase (CK) (Cytidine monophosphate kinase)(CMP kinase) TERM 543 722716 - 722733 + G 82 -2.7 -5.62288 | gap 1, overlap 722718 722729 TGATGGTATTATGGG GC-CTTTC AAA GAAGGTGC TTTTTATTTTCTTCG COPRO5265_0796 721775 - 722941 + | cytidylate kinase (CK) (Cytidine monophosphate kinase)(CMP kinase) COPRO5265_0797 722928 - 723776 + | LytB protein engA 723745 - 725022 + | ribosome-associated GTPase EngA TERM 544 725220 - 725206 - g 72 -8.6 -3.70417 | opp_overlap 725205 725209 725213, overlap 725209 AGGACATGACCCAAA GCATCT TCA AGATGC AGATTTTGTTGTCTA murC 725024 - 726379 + | UDP-N-acetylmuramate--alanine ligase ushA 726479 - 730174 + | multifunctional protein: 5-nucleotidase 2,3-cyclic-nucleotide 2-phosphodiesterase TERM 545 730199 - 730218 + F 100 -15 -4.31766 | opp_overlap 730199 ACGCACGCTGAAGAA GGGGAGCC AGCC GGCTCCCC TTTCTGTTATATAAT TERM 546 730218 - 730199 - f 100 -15 -3.63694 | opp_overlap 730199 ACGCACGCTGAAGAA GGGGAGCC AGCC GGCTCCCC TTTCTGTTATATAAT TERM 547 731103 - 731123 + G 82 -6.9 -4.81551 | CTGAAGATGATATCG CTAACCTTT ACA AGGGGTTAG TTTTTGCTATAAGTG COPRO5265_0801 730241 - 731953 + | glutamine-dependent NAD(+) synthetase COPRO5265_0807 732611 - 732408 - | helix-turn-helix, putative COPRO5265_0808 732998 - 732624 - | hypothetical protein nadE 733985 - 733095 - | NAD+ synthetase TERM 548 734097 - 734127 + H 73 -7.5 -4.07687 | gap 1, opp_overlap 734122 TATTTAAATGTTCGG GGCCCGTAGCTCAG GAGG CAGAGC-ACCGGCC TTTTAAGCCGGGAGT TERM 549 734138 - 734122 - H 71 -10.1 -2.65264 | opp_overlap 734097 TCAGGAGGCAGAGCA CCGGCCT TTT AAGCCGG GAGTCGCAGGTTCGA tig 734400 - 735599 + | trigger factor clpP 735603 - 736202 + | Clp protease clpX 736208 - 737461 + | ATP-dependent Clp protease, ATP-binding subunit ClpX lon 737454 - 739760 + | ATP-dependent protease La COPRO5265_0817 739744 - 740370 + | hypothetical protein TERM 550 741402 - 741382 - gf 73 -8.3 -3.62291 | opp_overlap 741382 741384 741395, overlap 741380 741384 TTAATACTAGAAAGA CAGCTACAG AAG CTGTAGCTC TTGAGTTGCATCGTC TERM 551 741400 - 741384 - gf 81 -10.9 -3.37902 | opp_overlap 741382 741384 741395, overlap 741382 741380 AATACTAGAAAGACA GCTACAG AAG CTGTAGC TCTTGAGTTGCATCG TERM 552 741384 - 741400 + GF 79 -10.9 -3.1585 | opp_overlap 741384 741382 741380, overlap 741382 741395 AATACTAGAAAGACA GCTACAG AAG CTGTAGC TCTTGAGTTGCATCG TERM 553 741461 - 741447 - gf 73 -8.6 -3.63744 | overlap 741445 TGTGTGGGGAAAACA TACCAG TGT CTGGTA GAAGCATCAAGCGGG COPRO5265_0818 740370 - 741644 + | 2-methylthioadenine synthetase COPRO5265_0819 741571 - 742038 + | competence/damage-inducible protein CinA C-terminal domain protein COPRO5265_0820 742035 - 742559 + | 2'-5' RNA ligase TERM 554 742648 - 742625 - g 83 -4.6 -5.40464 | opp_overlap 742628, overlap 742626 742628 GACGATAAACAAAAA GCATTGGACA TGAC TGTCCAATAT GTGGAAAAACGGTTT TERM 555 742647 - 742626 - g 72 -8.1 -3.82652 | opp_overlap 742628, overlap 742625 742628 ACGATAAACAAAAAG CATTGGACA TGAC TGTCCAATA TGTGGAAAAACGGTT recA 742583 - 743617 + | protein RecA COPRO5265_0822 743622 - 744032 + | regulatory protein RecX, putative TERM 556 744217 - 744206 - g 77 -7.2 -4.39277 | GAAGAGGAGAAGAAA GCGC AAGA GCGC TCTGAGGCATTGCTG TERM 557 744770 - 744804 + G 76 -7.8 -4.26903 | overlap 744772 GGAGTTGACCTAATC GTGGACGACACTCCTG AGG TAGTGGTGTTGTCCTC TTTTGATCCAGTGCG TERM 558 744772 - 744802 + G 76 -9 -3.73756 | overlap 744770 AGTTGACCTAATCGT GGACGACACTCCTG AGG TAGTGGTGTTGTCC TCTTTTGATCCAGTG COPRO5265_0823 744032 - 745597 + | HD/KH domain protein COPRO5265_0824 745594 - 746349 + | Ser/Thr protein phosphatase family protein miaB 746364 - 747644 + | tRNA-I(6)A37 thiotransferase enzyme MiaB miaA 747565 - 748563 + | tRNA delta(2)-isopentenylpyrophosphate transferase COPRO5265_0827 748535 - 749626 + | aluminium resistance protein thrS 749750 - 751648 + | threonyl-tRNA synthetase COPRO5265_0830 751645 - 753036 + | hypothetical protein gcvH 753062 - 753445 + | glycine cleavage system H protein TERM 559 753991 - 754007 + G 73 -9.5 -3.38207 | overlap 753994 GATAGCAGATCGTGT CAAGTTC GAT GAACTTG TTCCTGTATTCCCTC rho 753476 - 754861 + | transcription termination factor Rho thyX 754881 - 755570 + | thymidylate synthase, flavin-dependent tdk 755558 - 756154 + | thymidine kinase TERM 560 756979 - 756967 - g 79 -7.7 -4.41486 | CAAAACAAAATGAAA GCACT CAA AGTGC TCAGGGCAAAACTTT prfA 756160 - 757242 + | peptide chain release factor 1 hemK 757229 - 758029 + | protoporphyrinogen oxidase COPRO5265_0837 758034 - 758174 + | hypothetical protein TERM 561 758174 - 758213 + GT 100 -15.9 -3.47078 | opp_overlap 758167 758181 758184, overlap 758181 AGGAAAAGGTTTTTA GTGAAAACAAGGCGGCA ATCCTA TGCCGCCTTGTTTTAGC TTCTAATATGGACTG TERM 562 758181 - 758206 + GT 100 -14.8 -4.33151 | opp_overlap 758181 758184, overlap 758174 GGTTTTTAGTGAAAA CAAGGCGGCA ATCCTA TGCCGCCTTG TTTTAGCTTCTAATA TERM 563 758206 - 758181 - gT 100 -14.8 -4.18018 | opp_overlap 758181 758174, overlap 758184 GGTTTTTAGTGAAAA CAAGGCGGCA ATCCTA TGCCGCCTTG TTTTAGCTTCTAATA TERM 564 758203 - 758184 - gT 93 -10.7 -4.21812 | opp_overlap 758181 758174, overlap 758181 TTTTAGTGAAAACAA GGCGGCA ATCCTA TGCCGCC TTGTTTTAGCTTCTA COPRO5265_0838 758116 - 758229 + | hypothetical protein araH 759421 - 758231 - | ribose/xylose/arabinose/galactoside ABC-type transport system, permease component mglA 760960 - 759437 - | ABC-type sugar (aldose) transport system, ATPase component rbsB 762096 - 760984 - | periplasmic sugar-binding protein TERM 565 762338 - 762351 + G 74 -8.1 -3.97947 | opp_overlap 762338 762336, overlap 762330 762329 AGAGCTACCAGAAGA CTGGG TTTG CCCAG TTTGTGGTGCATCCA COPRO5265_0842 762234 - 762392 + | rubredoxin TERM 566 762423 - 762444 + F 100 -15.9 -3.76373 | opp_overlap 762423 TAATTTGAGGTAAAA GAGGCGAGC ATCT GCTCGCCTC TTTGCATATTAAGAG TERM 567 762444 - 762423 - f 100 -15.9 -4.19704 | opp_overlap 762423 TAATTTGAGGTAAAA GAGGCGAGC ATCT GCTCGCCTC TTTGCATATTAAGAG TERM 568 762828 - 762807 - g 87 -10.1 -4.35091 | AAGAGCTAGAAGAAA GCCTAACCC CAAA GGGTGAGGC AGTTAGCGAGGTAAC TERM 569 764846 - 764836 - g 72 -5.4 -4.52589 | opp_overlap 764836 TGCCGCCATAGAAAA CCTT GCT AAGG TAGGGTTTGATCCAG COPRO5265_0843 762533 - 765013 + | negative regulator of genetic competence ClpC/mecB TERM 570 765019 - 765072 + F 100 -12 -4.67552 | gap 2, opp_overlap 765048 TAGTAGCTAAGCTTT TTTCCCAGCTTGGACCAGCGTAATAA AGAC TTGA-ACGC-GGTTCAGGCTGGGAAA TTCTTTTTTAATAAC COPRO5265_0844 765120 - 766238 + | hypothetical protein TERM 571 766337 - 766327 - g 74 -5.4 -4.56597 | opp_overlap 766327 TTGTTGCTCTAAAAA TGGA AGA TCCA TTTGTGAGGATAATT TERM 572 766360 - 766371 + G 71 -3.6 -4.84527 | GGATAATTTTCGAAG CGGG AGAG CCTG TTTTTGCTGTCTACA COPRO5265_0845 766242 - 767300 + | hypothetical protein TERM 573 767397 - 767362 - T 100 -14.1 -5.02074 | gap 1, opp_overlap 767362 TTATGTTTCAAAAAA GAGGGCCTGGAGTCCC GCTTT GAG-CTCCAAGCCCTC TTTGCCGCTAGTTTT TERM 574 767362 - 767397 + T 84 -11.1 -3.60431 | opp_overlap 767362 TTATGTTTCAAAAAA GAGGGCCTGGAGTCC CGCTTT GAGCTCCAAGCCCTC TTTGCCGCTAGTTTT sgaB2 767723 - 767421 - | pentitol phosphotransferase enzyme II, B component sgaT 769091 - 767736 - | SgaT protein TERM 575 770090 - 770076 - g 70 -2.1 -4.91459 | overlap 770064 GAAGACTTAGAAAAA GCCAT GAATA ATGAC CCGGTGAAGTATTTG COPRO5265_0848 769272 - 770267 + | 2-oxo acid dehydrogenase subunit E1 COPRO5265_0849 770269 - 771279 + | 2-oxoisovalerate dehydrogenase subunit beta (branched-chain alpha-keto acid dehydrogenase e1 component beta chain) (bckdhe1-beta) COPRO5265_0850 771281 - 771508 + | dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2)(Dihydrolipoamide succinyltransferase component of 2-oxoglutaratedehydrogenase complex) TERM 576 771579 - 771527 - T 76 -7 -4.53602 | overlap 771532 CCTACAGGAAACAAA GCAAAGCAGGAGACGGGACCTT CAATACACC AAAGTCCCCTCTCCTGCTAACC TAGGAACATGACGTC TERM 577 771574 - 771532 - T 100 -14.3 -4.28115 | overlap 771527 AGGAAACAAAGCAAA GCAGGAGACGGGACCTT CAATACACC AAAGTCCCCTCTCCTGC TAACCTAGGAACATG COPRO5265_0851 772260 - 771574 - | lipoate-protein ligase A (Lipoate--protein ligase) COPRO5265_0852 773262 - 772270 - | acetoin catabolism protein X COPRO5265_0853 774105 - 773320 - | dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex (E2) (Dihydrolipoamideacetyltransferase component of pyruvate dehydrogenase complex) COPRO5265_0854 774918 - 774205 - | hypothetical protein TERM 578 774499 - 774487 - GH 80 -6.2 -4.78661 | ATGTAAAAAGTAAAA GGGC ACCCA GCCC ACAAGACTTATAAGC COPRO5265_0855 774898 - 775707 + | AP endonuclease, family 2, putative TERM 579 775713 - 775742 + Tr 100 -12.9 -3.36968 | gap 1, opp_overlap 775713 GGTCGAATAAGAAAA GGGTCCAAGC-CCC CAA GGAAGCTTGGACCC TTGTAAAATTAAATG TERM 580 775742 - 775713 - TR 100 -16.5 -4.89477 | opp_overlap 775713 GGTCGAATAAGAAAA GGGTCCAAGCCCC CAAG GAAGCTTGGACCC TTGTAAAATTAAATG TERM 581 775798 - 775788 - TR 70 -5.4 -4.57073 | opp_overlap 775797 CACCTTTTTCAAAAA TGAC ACC GTCA GCCTTAGGCGGTTTT COPRO5265_0856 776619 - 775765 - | sugar ABC transporter permease TERM 582 775797 - 775809 + g 76 -4.7 -4.78848 | opp_overlap 775788 CAAAAATGACACCGT CAGCC TTA GGCGG TTTTGTCTTTCCCAA COPRO5265_0857 777781 - 776645 - | sugar ABC transporter permease COPRO5265_0858 779313 - 777778 - | sugar ABC transporter, ATP-binding protein TERM 583 779538 - 779518 - R 100 -12.6 -5.8096 | opp_overlap 779513 779518 GAGAAAAAACAAAAA GGGCTACC CGCAC GGTAGCCC TTAAATCTTAATTGT TERM 584 779518 - 779538 + r 93 -12.6 -3.22208 | opp_overlap 779518, overlap 779513 GAGAAAAAACAAAAA GGGCTACC CGCAC GGTAGCCC TTAAATCTTAATTGT COPRO5265_0859 780720 - 779569 - | basic membrane protein family protein TERM 585 780749 - 780767 + H 77 -10.3 -3.14146 | overlap 780750 CTTTCGTCATTTTTA GCGGAAG TTTCC CTTCCGC TTCCGTAATATTATA COPRO5265_0860 780892 - 781926 + | 6-phosphofructokinase 1 (Phosphofructokinase 1)(Phosphohexokinase 1) (ATP-PFK) TERM 586 781975 - 781953 - g 70 -10.5 -2.55847 | overlap 781952 AATCGGCATACTAAC GTCCGGGGG TGATT CCCCCGGAA TGAATGCAGCTATTT TERM 587 782368 - 782354 - g 73 -11.4 -2.5474 | overlap 782353 782351 TGGGATTCATAACAG CCGCTG AAA CAGCGG TAAAAGCAGTTCGTC COPRO5265_0862 781930 - 782880 + | 6-phosphofructokinase (Phosphofructokinase)(Phosphohexokinase) COPRO5265_0861 783560 - 782844 - | 23S rRNA methyltransferase cysS 784947 - 783565 - | cysteinyl-tRNA synthetase COPRO5265_0864 786032 - 784944 - | bifunctional enzyme IspD/ispF COPRO5265_0865 787040 - 786036 - | conserved membrane protein, contains PIN domain radA 788285 - 787062 - | DNA repair protein COPRO5265_0867 790699 - 788282 - | negative regulator of genetic competence ClpC/mecB TERM 588 789776 - 789794 + g 76 -8.2 -4.03234 | opp_overlap 789776 789793 TCTGTAGTCATCATA GGTTGTTG CAC CAATAACC TTTATCTCACCACGA TERM 589 790226 - 790216 - G 72 -5.4 -4.46112 | overlap 790220 TTTCAGCCAAAGAAA CAAG GTC CTTG GAGAACTTGTCCAGA trxB2 791643 - 790714 - | thioredoxin-disulfide reductase COPRO5265_0869 792380 - 792090 - | hypothetical protein pyk 794010 - 792361 - | pyruvate kinase TERM 590 793084 - 793067 - G 83 -9.9 -4.10657 | opp_overlap 793067 793066, overlap 793081 GGATACTTCCCAAAA GCTGTCT CACC AGACAGC ATTACTGCATCGCTT COPRO5265_0871 794091 - 796010 + | DNA translocase FtsK purB 797323 - 796025 - | adenylosuccinate lyase COPRO5265_0873 797762 - 797298 - | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region TERM 591 797669 - 797657 - GR 81 -3.3 -5.41143 | overlap 797660 GACCGGCTAAAAAAA CTACC CCT GGAAG GTGTTGACCCTCTTC COPRO5265_0874 798531 - 797755 - | hypothetical protein TERM 592 798540 - 798569 + r 100 -13.7 -6.01725 | opp_overlap 798544, overlap 798544 CATTCATGGCAAATT AAAAGAGAGGGGA GTAA TCCCCTCTCTTTA TTTTTTCTTTTTCTT TERM 593 798565 - 798544 - R 100 -14.5 -4.55798 | opp_overlap 798544 798540 CATGGCAAATTAAAA GAGAGGGGA GTAA TCCCCTCTC TTTATTTTTTCTTTT TERM 594 798544 - 798565 + r 100 -14.5 -5.29208 | opp_overlap 798544, overlap 798540 CATGGCAAATTAAAA GAGAGGGGA GTAA TCCCCTCTC TTTATTTTTTCTTTT rpsU 798713 - 798567 - | ribosomal protein S21 COPRO5265_0876 799070 - 798741 - | histidine triad nucleotide-binding protein COPRO5265_0877 799117 - 800088 + | iron compound ABC transporter, permease protein hemV 800072 - 800731 + | iron (III) ABC transporter, ATP-binding protein (HemV-1) TERM 595 800715 - 800734 + T 70 -5.8 -4.4009 | gap 1, opp_overlap 800727, overlap 800718 AGGACGTTTTTGTCA CAGGCTACA TAA TGTAGC-TG TTTTCTACAATGGGC TERM 596 800718 - 800732 + T 75 -8.6 -3.80877 | opp_overlap 800727, overlap 800715 ACGTTTTTGTCACAG GCTACA TAA TGTAGC TGTTTTCTACAATGG COPRO5265_0878 801885 - 800719 - | Fe-S oxidoreductase COPRO5265_0880 802610 - 801882 - | conserved surface protein, putative prmA 803369 - 802614 - | ribosomal protein L11 methyltransferase TERM 597 802767 - 802757 - G 71 -6.8 -4.12942 | opp_overlap 802747, overlap 802747 CCAAAGGTTGTAAAA CCTC TCT GAGG CCCAAGAGAAGATCA COPRO5265_0882 804348 - 803371 - | LexA DNA binding domain protein COPRO5265_0883 804326 - 804892 + | hypothetical protein TERM 598 805260 - 805276 + Tr 72 -9.5 -3.22475 | overlap 805258 TCGAACCCGCGACCC TCAGCTT GGG AAGCTGA TGTTCTACCACTGAA TERM 599 805531 - 805551 + Tr 71 -8.9 -3.35597 | opp_overlap 805501 ATTTGAACCCCCGAT CTCCGGCTT GAC AGGCCGGCG TGTTTGGCCCCTACA TERM 600 805739 - 805756 + Tr 70 -2.6 -4.9755 | overlap 805741 GTCTTCCTATTCCGC CACCCC TGCTTT GGGGTC TTTTTCATTATATCT COPRO5265_0891 806813 - 805953 - | ABC-2 type transporter superfamily COPRO5265_0892 807733 - 806810 - | daunorubicin resistance ATP-binding protein DrrA TERM 601 807773 - 807785 + r 82 -4.8 -5.29445 | ATTCACTTGCTTGCA GACC ATTCC GGTC TTTTTGTTATTCAGG COPRO5265_0893 808387 - 808043 - | hypothetical protein dtd 809016 - 808588 - | D-tyrosyl-tRNA(Tyr) deacylase relA 810989 - 809013 - | GTP pyrophosphokinase TERM 602 810338 - 810364 + g 77 -3.9 -5.10933 | gap 2 GGATTATCCTTAGTC CCATTAGATCGAA TAT TTCG-TC-AATGG TTTTGTTTTGAGTAA apt 811645 - 811118 - | adenine phosphoribosyltransferase TERM 603 811485 - 811510 + g 70 -9.1 -3.33162 | gap 1 TCCACAGCGGCTACA GCAGTGACGTTC AGT GAGC-TCACTGC TTCTGCCATCAGGTC secF 812535 - 811648 - | protein-export membrane protein SecF secD 813809 - 812532 - | protein-export membrane protein SecD tgt 814968 - 813874 - | queuine tRNA-ribosyltransferase queA 816017 - 814986 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase COPRO5265_0901 816496 - 816014 - | hypothetical protein ruvB 817496 - 816534 - | holliday junction DNA helicase RuvB COPRO5265_0903 818011 - 817463 - | holliday junction ATP-dependent DNA helicase RuvA, putative COPRO5265_0904 818474 - 817995 - | crossover junction endodeoxyribonuclease RuvC (Hollidayjunction nuclease ruvC) (Holliday junction resolvase ruvC) TERM 604 818238 - 818280 + g 77 -10.8 -3.35996 | opp_overlap 818235 TACACCACGACATTC GCTTATTTGGAGCAAG TTATTTCTGTT CTTGCCCCAAATAAGC TTCTCGATAGCCATC COPRO5265_0905 819220 - 818474 - | hypothetical protein COPRO5265_0906 820708 - 819284 - | phenylalanine and histidine ammonia-lyase COPRO5265_0907 821908 - 820715 - | oxaloacetate decarboxylase beta chain TERM 605 821722 - 821700 - G 83 -4 -5.4251 | opp_overlap 821706, overlap 821702 TCCAGAGACAAAAAA TACCCACCTG CCA CCGGTAGGTT AGAAAGCAAGGCACC TERM 606 821720 - 821702 - G 72 -6.6 -4.34353 | opp_overlap 821706, overlap 821700 CAGAGACAAAAAATA CCCACCTG CCA CCGGTAGG TTAGAAAGCAAGGCA COPRO5265_0908 822367 - 821918 - | methylmalonyl-CoA decarboxylase, gamma subunit COPRO5265_0909 822704 - 822369 - | sodium pump decarboxylase, gamma subunit subfamily TERM 607 822464 - 822448 - G 76 -9.4 -3.80893 | opp_overlap 822460, overlap 822442 822460 ATGTGATAATGCAAA GCGGCT GCAAT AGCCGC CACGACTTCTGGTTC COPRO5265_0910 824261 - 822717 - | methylmalonyl-CoA carboxyltransferase 12S subunit (Transcarboxylase 12S subunit) mce 824669 - 824265 - | methylmalonyl-CoA epimerase COPRO5265_0912 825573 - 824659 - | LAO/AO transport system ATPase COPRO5265_0913 825944 - 825552 - | methylmalonyl-CoA large subunit sbm 827623 - 825965 - | methylmalonyl-CoA mutase, N- domain/subunit COPRO5265_0915 829443 - 827626 - | putative cell division protease FtsH hpt 830060 - 829512 - | hypoxanthine phosphoribosyltransferase COPRO5265_0917 831004 - 830060 - | tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) TERM 608 830224 - 830213 - G 72 -5.8 -4.41494 | overlap 830215 CACCGCCAAGTAAAA CAGC ACAA GCTG TGCACTGCGCGAGTA COPRO5265_0920 831456 - 831238 - | hypothetical protein COPRO5265_0921 831988 - 831437 - | NADH dehydrogenase subunit COPRO5265_0922 832463 - 831990 - | hydrogenase-4 component I COPRO5265_0923 833427 - 832477 - | hydrogenase-4 component C TERM 609 833332 - 833348 + g 78 -5.2 -4.99035 | AGGGCCATATCTTCC TTGTAG ACGAG CTACAA TTTTTCTATCGATAC COPRO5265_0924 836498 - 833424 - | membrane bound hydrogenase, MbxH subunit COPRO5265_0925 834084 - 834179 + | hypothetical protein COPRO5265_0926 836836 - 836495 - | Na(+)/H(+) antiporter subunit C COPRO5265_0927 837259 - 836837 - | membrane bound hydrogenase, MbhF subunit COPRO5265_0928 837636 - 837256 - | membrane bound hydrogenase, MbxF subunit TERM 610 837609 - 837599 - G 95 -3.2 -5.93252 | CCGAAAAACAAAAAA GCCA CTA TGAC AAAAGCCAGAAAATC COPRO5265_0929 837884 - 837633 - | membrane bound hydrogenase, MbhD subunit COPRO5265_0930 838227 - 837877 - | Na(+)/H(+) antiporter subunit G (Multiple resistance and pHhomeostasis protein G) (Mrp complex subunit G) COPRO5265_0931 838483 - 838229 - | membrane bound hydrogenase, MbxB subunit TERM 611 838512 - 838491 - R 73 -7.1 -4.15006 | ACACTCATGGGAAAA GCCTCCTCG CAAA CGGGGCGGC AAAACCATAGATGAT COPRO5265_0932 838989 - 838480 - | membrane bound hydrogenase, MbhA subunit COPRO5265_0933 840090 - 839008 - | EchE COPRO5265_0934 840496 - 840101 - | carbon monoxide-induced hydrogenase, CooU subunit TERM 612 840675 - 840691 + GH 72 -7.9 -3.86015 | opp_overlap 840674 840675 ATGGGATTGTACAAG GCGTCGG CTT CCGACCC TTTGTCGCGAGAATC hypF 840635 - 842929 + | [NiFe] hydrogenase maturation protein HypF hypC 842844 - 843074 + | hydrogenase assembly chaperone HypC/HupF TERM 613 843955 - 843977 + G 79 -9.9 -3.72242 | gap 1 TGCGCAGACGTGGTG CTGGGTGCGG CAGA CC-CACCCAG TTGTCCTTTGTTTGG COPRO5265_0937 843052 - 844095 + | hydrogenase expression/formation protein HypD TERM 614 844324 - 844341 + G 71 -7.7 -3.92324 | opp_overlap 844323, overlap 844325 TGCAGGAGCTAAACC TTCAGCG CTGG CGCTGAG TTTAATCTTGGAGGA TERM 615 844673 - 844683 + G 80 -5.4 -5.05782 | ATCGATGTTTTGAAG CCTT TTG AAGG TTTTTTAAAATGGAT hypE 844088 - 845047 + | hydrogenase expression/formation protein HypE COPRO5265_0939 845060 - 845419 + | HypA, putative hypB 845428 - 846150 + | hydrogenase accessory protein HypB COPRO5265_0940 847115 - 846102 - | riboflavin biosynthesis protein RibF, putative TERM 616 846435 - 846425 - GT 77 -8.2 -3.99405 | opp_overlap 846426 GGAATCCATCATAAA CCCC GTA GGGG GGTCGGGTCTTTTGT truB 847915 - 847043 - | tRNA pseudouridine synthase B TERM 617 847749 - 847736 - GR 95 -4.5 -5.76237 | TAGAGAAAGAAAAAA GTCAG AAAA CCGAC AAGCTCTGCCTATAC COPRO5265_0943 849138 - 847903 - | DHH family rbfA 849493 - 849080 - | ribosome-binding factor A COPRO5265_0945 849795 - 849514 - | hypothetical protein infB 851550 - 849796 - | translation initiation factor IF-2 nusA 852571 - 851540 - | transcription termination factor NusA TERM 618 852320 - 852279 - GR 83 -10.9 -3.40597 | opp_overlap 852288, overlap 852277 GTCTGTATGGAAACA CGGCTCAGATTGGACAGAG GGAA CTCAATCCAATCTGATACG GCCTCATCTTCAGGT COPRO5265_0948 853040 - 852531 - | protein of unknown function, putative TERM 619 853101 - 853071 - R 100 -11.9 -3.86015 | opp_overlap 853071 853067 853064 853064 853074, overlap 853074 853077 TACGGTCCTTATAAA GAAGAAGTGGGAC TCAAG GCCCCACCTCTCC TTTATACATTATATA TERM 620 853098 - 853074 - R 86 -10 -4.06419 | opp_overlap 853071 853067 853064 853064 853074, overlap 853071 853077 GGTCCTTATAAAGAA GAAGTGGGAC TCAAG GCCCCACCTC TCCTTTATACATTAT TERM 621 853095 - 853077 - R 76 -8.1 -4.15703 | opp_overlap 853074 853071 853067 853064 853064, overlap 853074 853071 CCTTATAAAGAAGAA GTGGGAC TCAAG GCCCCAC CTCTCCTTTATACAT TERM 622 853160 - 853177 + r 75 -3.3 -5.14645 | overlap 853157 TGCAATTCGATTACC GCTCCGG CTTC CTCGAGC TTTTTCTTCAATTCT rplL 853518 - 853141 - | ribosomal protein L7/L12 COPRO5265_0950 854065 - 853535 - | 50S ribosomal protein L10 TERM 623 854121 - 854097 - R 100 -17.2 -4.18018 | CCTCCTTACGCAAAA GGCCACCGAC GGTAG GTCGGTGGCC TCAACCCAATATCCA rplA 854952 - 854245 - | ribosomal protein L1 rplK 855444 - 855019 - | ribosomal protein L11 nusG 856019 - 855471 - | transcription antitermination factor secE 856242 - 856039 - | preprotein translocase, SecE subunit rpmG 856500 - 856351 - | ribosomal protein L33 tuf1 857731 - 856514 - | translation elongation factor Tu TERM 624 857786 - 857764 - H 76 -9.8 -3.30771 | TGACACTTGTTAGAA CCAGTACTGG AGC CCAGGACCGG ACTTGAACCGGTGGC TERM 625 858031 - 858052 + H 70 -7.4 -3.75665 | opp_overlap 858031 858033 CCCAAACTTAGCACA GACCATAT TATAAC ATATGGTC TTTAGTGCACTCTGC TERM 626 858193 - 858209 + G 80 -9.5 -3.84451 | opp_overlap 858193, overlap 858182 ATGAGCTTGTTAAAA GCTTGTT ATG AACAAGC TTTCCCTTTCGACCA TERM 627 858209 - 858193 - g 83 -9.5 -4.08945 | opp_overlap 858182 858193 ATGAGCTTGTTAAAA GCTTGTT ATG AACAAGC TTTCCCTTTCGACCA COPRO5265_0961 858157 - 858300 + | hypothetical protein COPRO5265_0963 858645 - 859616 + | D-3-phosphoglycerate dehydrogenase TERM 628 860887 - 860874 - gT 71 -2.4 -5.08824 | opp_overlap 860874 GCGTCATCCAAAAAA CAAG AAAGGG CTTG TCCTGTACAAGAATT COPRO5265_0965 859570 - 860958 + | fibronectin-binding protein, putative COPRO5265_0964 862084 - 860951 - | carboxyl- protease TERM 629 861124 - 861135 + g 76 -4.4 -5.00616 | TGGTCTGAATTTCTC CCTT TCCG AAGG TTTTTTCACCCACCA COPRO5265_0966 863253 - 862093 - | membrane protein TERM 630 863084 - 863099 + g 79 -9 -4.03002 | TTACTTTTGACTTCG CTCAGC TGCT GCTGAG TTGCTTTTTTCTGTT COPRO5265_0967 864166 - 863237 - | efflux ABC transporter, permease protein TERM 631 863857 - 863839 - GR 71 -7.4 -3.84719 | opp_overlap 863839 ACTGGGAAAGGGAAA GCCTTAGC TCT GCTAACGC TTGTTCCGAACTTAC ftsE 864854 - 864138 - | cell-division ATP-binding protein prfB 865959 - 864847 - | peptide chain release factor 2 secA 868274 - 865956 - | preprotein translocase, SecA subunit yfiA 868846 - 868274 - | ribosomal subunit interface protein COPRO5265_0972 869739 - 868867 - | YitT family protein paaY 870274 - 869759 - | putative carbonic anhydrase ppp 871206 - 870409 - | putative serine/threonine phosphatase ppp TERM 632 871508 - 871492 - H 95 -12.3 -3.25942 | opp_overlap 871492 AGGTTTGTACACGAA TCCCTCC ATC GGAGGGA TTTTTTTTGTCAAAA TERM 633 871492 - 871508 + H 100 -12.3 -5.93809 | opp_overlap 871492 AGGTTTGTACACGAA TCCCTCC ATC GGAGGGA TTTTTTTTGTCAAAA metK 871550 - 872761 + | methionine adenosyltransferase TERM 634 872782 - 872828 + GT 73 -10.1 -2.96873 | opp_overlap 872779 872790 872812, overlap 872778 CTTAATAATAGACAG TTAGGAGATGCCTCCCTCACT ACAGC AGAAGGGGAGGCATCTCCGGG TGATTTAGTCAGAGT COPRO5265_0978 874631 - 874527 - | hypothetical protein COPRO5265_0980 872746 - 874638 + | hypothetical protein truA 875379 - 874600 - | tRNA pseudouridine synthase A TERM 635 874881 - 874902 + gr 79 -2.9 -5.40072 | overlap 874883 CATACAACTTGCGTC GCGTACTCT TAAC AGAGGACCC TTTTTTTGAAAACCC COPRO5265_0981 876188 - 875373 - | cobalt ABC transporter permease protein COPRO5265_0982 877051 - 876188 - | cobalt import ATP-binding protein CbiO 1 TERM 636 876852 - 876819 - GR 79 -8.2 -4.08692 | gap 2, opp_overlap 876835, overlap 876820 CAAGGTTTTCCAAAA TGCTTCACCGTCCCCT TGGT AGGGG-CGGTG-AGCC CTGCCATAAGTTGAG TERM 637 876851 - 876820 - GR 83 -11.7 -3.04894 | gap 2, opp_overlap 876835, overlap 876819 AAGGTTTTCCAAAAT GCTTCACCGTCCCCT TGGT AGGGG-CGGTG-AGC CCTGCCATAAGTTGA COPRO5265_0983 877800 - 876985 - | cobalt import ATP-binding protein CbiO 2 TERM 638 877195 - 877173 - GR 72 -4.9 -4.59109 | gap 1, overlap 877176 CAGATCCTTGAAAAA CG-ACTCTGC CTTG ACAGAGTGCG TAGAGCGCGTCCGCT TERM 639 877774 - 877743 - GR 100 -13.1 -3.68908 | AAATATTCATGGAAA CGGACTGGAGAAT TGATCT ACCCTCCAGTCCG TAAGAGACTTCCTGA rplQ 878150 - 877797 - | ribosomal protein L17 COPRO5265_0985 879093 - 878134 - | RNA-polymerase DNA-directed rpsD 879743 - 879111 - | ribosomal protein S4 rpsK 880143 - 879766 - | ribosomal protein S11 rpsM 880548 - 880174 - | ribosomal protein S13p/S18e infA 880913 - 880692 - | translation initiation factor IF-1 COPRO5265_0990 881185 - 880913 - | hypothetical protein map 881921 - 881178 - | methionine aminopeptidase, type I COPRO5265_0992 882549 - 881911 - | adenylate kinase (ATP-AMP transphosphorylase) TERM 640 882529 - 882478 - G 74 -10.5 -3.25668 | gap 2, opp_overlap 882489 882490, overlap 882488 882490 AATCCACCCATAATA TCTTGAAAAATACTGGGCCTGAGTA CCTT TAC-CAGACCCAGG-TTTTCCAAGA AAAACAACGTACTTG TERM 641 882518 - 882490 - G 84 -10.4 -3.91908 | gap 1, opp_overlap 882490 882489, overlap 882488 882478 ATATCTTGAAAAATA CTGGGCCTGAGTA CCTT TAC-CAGACCCAG GTTTTCCAAGAAAAA secY 883841 - 882552 - | preprotein translocase, SecY subunit rplO 884291 - 883842 - | ribosomal protein L15 rpsE 884794 - 884306 - | ribosomal protein S5 rplR 885182 - 884808 - | ribosomal protein L18 COPRO5265_0997 885024 - 885149 + | hypothetical protein rplF 885740 - 885195 - | ribosomal protein L6 rpsH 886150 - 885752 - | ribosomal protein S8 rpsN 886348 - 886163 - | ribosomal protein S14p/S29e COPRO5265_1001 886908 - 886369 - | 50S ribosomal protein L5 (BL6) rplX 887245 - 886928 - | ribosomal protein L24 rplN 887632 - 887264 - | ribosomal protein L14 rpsQ 887894 - 887607 - | ribosomal protein S17 rpmC 888085 - 887891 - | ribosomal protein L29 TERM 642 887972 - 887998 + g 76 -8 -4.27316 | AATTGCAGTATGATC TGTCAGCTTACC CAC GGAAAGCTGAAA TTTTAGATTCACCAA rplP 888508 - 888101 - | ribosomal protein L16 rpsC 889199 - 888495 - | ribosomal protein S3 rplV 889557 - 889213 - | ribosomal protein L22 TERM 643 889454 - 889475 + g 72 -8.1 -3.74693 | AAAATCGCCCTGGCT TCAGAAACG GACT TGTTTCTGA TTTCGTCCACTACCA rpsS 889860 - 889570 - | ribosomal protein S19 rplB 890712 - 889882 - | ribosomal protein L2 rplD 891628 - 891002 - | ribosomal protein L4/L1 family TERM 644 891306 - 891320 + g 74 -8.6 -3.96068 | AAACAGGAGGCCATG GCAAGT TTT ACTTGC TTCTTGTTAACGTCC rplC 892290 - 891631 - | ribosomal protein L3 TERM 645 891730 - 891752 + g 71 -3.4 -4.86939 | AACAGCGATTATGTT TTGCTCAGGT ATG ACCTTAACAA TTTTTAGGTTTCTTA rpsJ 892614 - 892306 - | ribosomal protein S10 tuf2 893851 - 892634 - | translation elongation factor Tu fusA1 895950 - 893851 - | translation elongation factor G TERM 646 894892 - 894909 + g 78 -5.6 -4.73635 | CCTTAGAAGCCTGGA GACTCT TTCTTT AGAGTC TTTTGTTACGTTATA TERM 647 895572 - 895551 - G 78 -5.9 -4.87665 | gap 1 TCTTATTTACAAAAA CAATAC-GCG GTA CGCTGTATCG GTCAGCCTGACGCCA rpsG 896427 - 895957 - | ribosomal protein S7 rpsL 896820 - 896431 - | ribosomal protein S12 rpoC 902983 - 896870 - | RNA polymerase beta subunit TERM 648 897872 - 897862 - G 71 -6.8 -4.07568 | CCTTTCTCTCCAAAA GCTG ATA CAGC TCCTCCATCATTTCG COPRO5265_1019 906873 - 902992 - | putative DNA-directed RNA polymerase subunit beta TERM 649 903736 - 903746 + g 82 -5.4 -5.1764 | ACCAGACATCTTATC TCCA GGC TGGA TTTTTCTCTTCTGTG TERM 650 906630 - 906661 + g 70 -9.4 -3.31792 | CGTCCTCTGGGGTAT TGATGGGGTTGCCG GTTT CGTCAGCCACATCA TTCTCAAAATAATAA TERM 651 907170 - 907186 + r 72 -10.1 -2.78935 | opp_overlap 907161 ATCGAACCCGCACCT CCGGGTT GAG AGCCCGG TATACTAACCACTAT COPRO5265_1024 907772 - 907401 - | hypothetical protein TERM 652 907739 - 907712 - G 93 -9 -4.86731 | opp_overlap 907711, overlap 907715 GCCGTTCAAAGAAAA CAAGGAGGCGCC GTTT GGCGCCTCCAAA ATCCTTCCCTGTGAA TERM 653 907736 - 907715 - G 100 -17.3 -4.54026 | opp_overlap 907711, overlap 907712 GTTCAAAGAAAACAA GGAGGCGCC GTTT GGCGCCTCC AAAATCCTTCCCTGT cstA 909387 - 907765 - | carbon starvation-induced protein COPRO5265_1026 909822 - 909433 - | hypothetical protein COPRO5265_1027 910020 - 910670 + | Zn-dependent hydrolases of the metallo-beta-lactamase superfamily COPRO5265_1029 910667 - 911155 + | hydrolase, had-superfamily, subfamily iiia protein COPRO5265_1028 911866 - 911111 - | ribonuclease hiii (rnase hiii), putative TERM 654 911804 - 911820 + g 70 -5.1 -4.41844 | overlap 911791 911810 ACCCTTCTTCTGAGC TCCCTCT TGA AGAAGGA TTTTCTCCAACTTTT TERM 655 911906 - 911918 + G 70 -4.9 -4.41512 | AATTATCTCATGTGG GTAAA CGC TTTAC TGTTTTTTGTTGTGG TERM 656 912559 - 912528 - g 100 -13.8 -4.86731 | opp_overlap 912527 TTGGCTTAAACAAAA TGGAGCGAAAGACA CCTT TGCCCTTCGCCCCA ATCATGTTTGCTGGA COPRO5265_1030 911900 - 912637 + | leader peptidase PilD COPRO5265_1031 913452 - 912640 - | hypothetical protein COPRO5265_1032 913940 - 913449 - | membrane spanning protein TERM 657 914539 - 914581 + G 82 -13.5 -2.95298 | gap 1, opp_overlap 914535 914532 TACGTAAATCACCTC TTGGTCTCATTGGGGCGGCA CGTT TGCCGCCCTCA-GAGACCAC TATGTCATCAGTGCG nth2 914005 - 914634 + | endonuclease III fhs 916211 - 914616 - | formate--tetrahydrofolate ligase TERM 658 916054 - 916074 + g 71 -7.6 -3.87815 | gap 1 GCTGTAGTGGTTTTT CCCT-CTCC AGCA GGAGTAGGG TTTATGGACGTAACC hutI 917499 - 916231 - | imidazolonepropionase ftcD 918409 - 917480 - | glutamate formiminotransferase hutU 920070 - 918409 - | urocanate hydratase TERM 659 918440 - 918453 + g 89 -6.7 -5.27335 | overlap 918420 TCGAAGTTTTCCATG GGCAT TCTT ATGCC TTTTTCTTTGGCCAC COPRO5265_1038 920844 - 920314 - | cob(I)alamin adenosyltransferase COPRO5265_1039 921715 - 920834 - | hypothetical protein holA 922694 - 921720 - | DNA polymerase III, delta subunit COPRO5265_1041 923552 - 922719 - | inositol monophosphatase 3 (IMPase 3) (IMP 3) (Inositol-1(or 4)-monophosphatase 3) TERM 660 923485 - 923459 - G 73 -8 -4.08064 | AACCCGTCCTTAAAA TGTCCCCAGCTT TCA AAGCTGTGGAAA TAACAGTATTCATGA COPRO5265_1042 923812 - 923675 - | hypothetical protein TERM 661 923777 - 923793 + gr 74 -7.3 -4.22883 | AAGACCTATCATCAT GGACAGT AGA ACTGTTC TTATTTTGACTACTA COPRO5265_1043 924425 - 923760 - | putative ribonuclease COPRO5265_1044 925541 - 924696 - | DegV family protein, putative COPRO5265_1045 926205 - 925534 - | R3H domain protein TERM 662 925792 - 925815 + g 72 -3 -4.95876 | overlap 925796 CACGCTTTGTTCTAC CATGTCCTCC AGCT GGCGGATACG TTTTTGCTTGTAATT TERM 663 926270 - 926241 - R 70 -3.5 -4.82901 | gap 1, opp_overlap 926248, overlap 926252 GTTTGTTCACAAAAA GGCAGAAC-AAAGC AGT GCGTTAGCACTGCC CCGCTTCCTTTTGCT TERM 664 926269 - 926252 - R 100 -11.3 -4.38114 | opp_overlap 926248, overlap 926241 AAAAGGCAGAACAAA GCAGTGC GTTA GCACTGC CCCGCTTCCTTTTGC COPRO5265_1046 927019 - 926354 - | membrane protein OxaA 1 TERM 665 926531 - 926559 + g 82 -11.7 -3.41978 | overlap 926534 CCACATCATCATGTT CTGCTGACGCTGC ATG GCAGGGTCAGTGG TTGCTTGACTTGTAA TERM 666 926534 - 926556 + g 77 -12 -2.85784 | overlap 926531 CATCATCATGTTCTG CTGACGCTGC ATG GCAGGGTCAG TGGTTGCTTGACTTG COPRO5265_1047 927270 - 927004 - | hypothetical protein rnpA 927574 - 927215 - | ribonuclease P protein component COPRO5265_1049 927757 - 927849 + | hypothetical protein COPRO5265_1050 928043 - 929164 + | NADPH-dependent butanol dehydrogenase COPRO5265_1051 929293 - 929658 + | hypothetical protein TERM 667 929709 - 929673 - f 100 -19.5 -4.65895 | overlap 929674 GGTTTTATGCAAAAA TCACTTCCCAGAGGGGC TCA GCTCCTCTGGGAAGTGC AAAACAAAGGGGGTT TERM 668 929708 - 929674 - f 100 -23 -3.39216 | overlap 929673 GTTTTATGCAAAAAT CACTTCCCAGAGGGGC TCA GCTCCTCTGGGAAGTG CAAAACAAAGGGGGT smc 929728 - 930219 + | chromosome segregation protein COPRO5265_1053 931794 - 930529 - | PilG, putative TERM 669 930929 - 930947 + g 70 -8.8 -3.30338 | opp_overlap 930930, overlap 930930 CGCAGCGTCTTAGAA AGCCTGAG GTA CTCAGGCG TTATGGCAACCTTGT TERM 670 930946 - 930930 - G 95 -12.3 -3.86346 | opp_overlap 930929 930930 GCAGCGTCTTAGAAA GCCTGAG GTA CTCAGGC GTTATGGCAACCTTG TERM 671 930930 - 930946 + g 78 -12.3 -2.57881 | opp_overlap 930930, overlap 930929 GCAGCGTCTTAGAAA GCCTGAG GTA CTCAGGC GTTATGGCAACCTTG TERM 672 931174 - 931158 - G 72 -9.3 -3.56092 | overlap 931159 CCATCATGTCGTAAA GCCCGCC CAA GGTGGGC AGAACAAACAGCATG TERM 673 931308 - 931328 + g 87 -11.1 -3.95051 | ACAAGTCCTTCAGTG CCAGCGGCA GCG TACCGCTGG TTTCTCCGCTTCTTA epsE 933385 - 931775 - | general secretion pathway protein E TERM 674 932621 - 932607 - G 73 -11.4 -2.68338 | opp_overlap 932604 932605, overlap 932603 932604 ACCAAGTCAAACTGA CCGTCC TGT GGACGG CGCTTCTCCGCAATG COPRO5265_1055 933827 - 933426 - | general secretion protein G TERM 675 933848 - 933879 + H 79 -11 -2.94099 | gap 1 AGCACCTCCTTCTGT TTTATGCCACAGGGA GCA TCCC-GCGGCATAAA TATATGGTAAGCCCC TERM 676 934429 - 934410 - H 85 -4.2 -5.4492 | opp_overlap 934422 CACATATATAAAAAA CGCTGTGC AGGG GCAAAACG GGCAAGCAAACCAAC COPRO5265_1057 934490 - 934933 + | TM2 domain protein COPRO5265_1058 935013 - 935408 + | TM2 domain family protein TERM 677 935834 - 935818 - g 70 -5.1 -4.53303 | opp_overlap 935829, overlap 935823 GAGGCTCACAGAAAA GCAGATT GCC ATTCTGC AAACGGAACTTATGA TERM 678 935950 - 935934 - g 70 -2.2 -5.03314 | TCTACTTGGAAAAAA CAGGAC AAGCA GTGCTG TACCTATTTTTAGGA COPRO5265_1059 935783 - 936265 + | hypothetical protein TERM 679 937017 - 937033 + F 78 -7.3 -4.48221 | overlap 937027 GGGACCCATTAGCCT GTTATCC CCA GGGTAAC TTTTATCCGTTGATC TERM 680 937675 - 937688 + F 71 -4.5 -4.7254 | overlap 937663 TTCGGCTTCCGCCTT CGCAG AGAC CTGTG TTTTTGGTAAACAGT TERM 681 938034 - 938015 - f 70 -7.9 -3.61398 | CCTCGCTGCTAAGAA CGTGCTA TTCCAC TAGCACG CGTAGCTACCTTCCT TERM 682 939761 - 939777 + F 76 -10.9 -2.62983 | opp_overlap 939773, overlap 939732 TCGAACCGCTGACCC CCTGCTT GCA AAGCAGG TGCTCTCCCGCTGAG TERM 683 941431 - 941446 + F 73 -9 -3.45849 | CGTATGAAGGTTTAG CCTCAG TTTC CTGAGG TTGTCCTCCTCTGAA TERM 684 942204 - 942218 + G 73 -4.2 -4.7373 | overlap 942206 TATTTAGCAGAGGCA GAGCAA ACA TTGCAC TTTTTGATACGGTGG TERM 685 943001 - 942987 - g 70 -10 -3.10522 | ACCCCACCGAAGACA TGGTGC TGG GCACCA TTGGACCTCTGGTTT COPRO5265_1067 941930 - 943600 + | hypothetical protein COPRO5265_1066 944381 - 943560 - | bifunctional protein FolD TERM 686 944194 - 944223 + g 75 -10.1 -3.55563 | opp_overlap 944194 944193 944183 GTAAGCTCCTGAAAC TGTTCTACTTCGT TTAC GCGAAGTTGAACA TTTAGGCGCTGGGCT TERM 687 944454 - 944424 - R 83 -11.3 -2.92091 | gap 1, opp_overlap 944423 944422 ATATGCATGCATACA TGCCTGTG-CACAG CTAA CTATGGCACAGGCA CATTATTGCTTTGTA TERM 688 944500 - 944478 - R 100 -7.8 -5.27335 | opp_overlap 944478 944479, overlap 944479 CTTTGTAAAGAAAAA CGCAAACAAA ACA TTTGCTTGCA TGGATTCATTTTACA TERM 689 944499 - 944479 - R 78 -9.1 -3.75678 | opp_overlap 944478 944479, overlap 944478 TTTGTAAAGAAAAAC GCAAACAAA ACA TTTGCTTGC ATGGATTCATTTTAC COPRO5265_1068 944601 - 944506 - | hypothetical protein TERM 690 944618 - 944591 - G 100 -9.1 -5.19879 | gap 1, opp_overlap 944592, overlap 944592 944595 TTGTAAAGAGAAAAA GGAGCCCCCACC TCAGT GG-GGGGTCTCC CTTACCAACGAACTT TERM 691 944592 - 944615 + g 78 -12.4 -2.52464 | opp_overlap 944592 944591 944595 TGTAAAGAGAAAAAG GAGCCCCCAC CTCA GTGGGGGGTC TCCCTTACCAACGAA TERM 692 944615 - 944592 - G 93 -12.4 -3.70843 | opp_overlap 944592, overlap 944591 944595 TGTAAAGAGAAAAAG GAGCCCCCAC CTCA GTGGGGGGTC TCCCTTACCAACGAA TERM 693 944612 - 944595 - G 78 -12.7 -2.63365 | opp_overlap 944592, overlap 944592 944591 AAAGAGAAAAAGGAG CCCCCAC CTCA GTGGGGG GTCTCCCTTACCAAC COPRO5265_1069 946062 - 944620 - | glycine cleavage system P-protein TERM 694 944971 - 944948 - G 70 -9.6 -3.06418 | opp_overlap 944953, overlap 944945 944954 TGCTTACACAAACCA GGATAAGCTG TGGG CAGCGTATCC TCCATGGCAACGCGC TERM 695 945186 - 945210 + g 70 -2.1 -5.08824 | CTTTCACCAAAACAG GCTTTGGCA AAAACGG TTCCAGAGC TTTTTTGACTGCCAC TERM 696 946064 - 946074 + r 76 -6.8 -4.55625 | opp_overlap 946063 946064 AGTTCTTTAAGCAAG GGCA ATG TGCC TTTTCTACTGTTCAT COPRO5265_1070 947396 - 946089 - | glycine cleavage system P-protein gcvT 948478 - 947393 - | glycine cleavage system T protein COPRO5265_1072 949844 - 948522 - | 4-aminobutyrate aminotransferase COPRO5265_1073 949938 - 951287 + | KtrB trkA 951307 - 951963 + | trk system potassium uptake protein TrkA TERM 697 951951 - 951986 + T 81 -11.8 -2.56761 | opp_overlap 951955 TTATAATTTCTTAAG GCAACAGCGCTAGGCC CTAA GGCCTAGCGCTGTAAA TCACTTCCCATTTTG TERM 698 951982 - 951955 - T 100 -21.4 -3.17571 | opp_overlap 951951 AATTTCTTAAGGCAA CAGCGCTAGGCC CTAA GGCCTAGCGCTG TAAATCACTTCCCAT pncB 953154 - 951967 - | nicotinate phosphoribosyltransferase eno 954474 - 953176 - | phosphopyruvate hydratase TERM 699 954363 - 954347 - G 73 -10.1 -3.34233 | overlap 954338 GTAGAAGCGCCAGAA GGCACAG CTG CCGTGCC CATGCTACCGTCTTC porG 955040 - 954507 - | pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit COPRO5265_1078 955893 - 955045 - | OorB subunit of 2-oxoglutarate:acceptor oxidoreductase COPRO5265_1079 957010 - 955886 - | OorA subunit of 2-oxoglutarate:acceptor oxidoreductase COPRO5265_1080 957228 - 957007 - | hypothetical protein COPRO5265_1081 958103 - 957318 - | deoxyribonuclease, TatD family TERM 700 957927 - 957875 - G 71 -10.7 -2.63252 | gap 2, opp_overlap 957874 957883, overlap 957872 957874 957883 ATTGCTTAAGAACAT CCAGGGAACCAGTAGCGTTATGGGG ATGAA CCCCG-ACCGCTACCGGTTCC-TGA GGATGCCTTAGCTGA metG 960035 - 958119 - | methionyl-tRNA synthetase glmS 962085 - 960265 - | glutamine-fructose-6-phosphate transaminase (isomerizing) glmM 963439 - 962093 - | phosphoglucosamine mutase GlmM TERM 701 962624 - 962602 - G 72 -8.4 -3.7282 | opp_overlap 962601 962603, overlap 962603 962605 TGAGCGTACCAACAA CCAGCTTTGG ATC CCAAAGCCGT CTTTGGGAGAGGTAT TERM 702 962623 - 962603 - G 77 -11.9 -2.83371 | opp_overlap 962601 962603, overlap 962602 962605 GAGCGTACCAACAAC CAGCTTTGG ATC CCAAAGCCG TCTTTGGGAGAGGTA TERM 703 962603 - 962623 + g 73 -9.7 -3.34715 | opp_overlap 962603 962602 962605, overlap 962601 GAGCGTACCAACAAC CAGCTTTGG ATC CCAAAGCCG TCTTTGGGAGAGGTA TERM 704 962621 - 962605 - G 75 -10.9 -2.96249 | opp_overlap 962603 962601, overlap 962603 962602 GCGTACCAACAACCA GCTTTGG ATC CCAAAGC CGTCTTTGGGAGAGG COPRO5265_1085 964467 - 963439 - | hypothetical protein COPRO5265_1086 965248 - 964448 - | hypothetical protein TERM 705 965207 - 965177 - G 100 -14.8 -3.97511 | CAGCCAATACAACAA TGCCGTCACCAACG CCA CATCGATGACGGCA CCAAGAATTGTTCCC arcC 966180 - 965245 - | carbamate kinase TERM 706 965666 - 965631 - G 90 -14.2 -3.39327 | overlap 965632 CGGTGATAGGCACAA TGCTTTCCTCCATTAA TGCC CTAATGGAGGAAAGCT CAACAATTCTACGCG TERM 707 965665 - 965632 - G 100 -17.7 -2.63382 | overlap 965631 GGTGATAGGCACAAT GCTTTCCTCCATTAA TGCC CTAATGGAGGAAAGC TCAACAATTCTACGC TERM 708 966117 - 966078 - G 87 -10.7 -4.12188 | opp_overlap 966080 TGACTAGTCGCAAAA GCTGAGCAGCAGTACGC TCAGCG GCATACTGCTGCCCCTC TATGCCATCGGGCCC argF 967124 - 966186 - | ornithine carbamoyltransferase COPRO5265_1089 968442 - 967126 - | hypothetical protein rffM 968395 - 969201 + | glycosyl transferase WecB/TagA/CpsF family COPRO5265_1091 969126 - 970268 + | CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family protein COPRO5265_1092 970428 - 970297 - | hypothetical protein COPRO5265_1093 970328 - 970447 + | hypothetical protein TERM 709 970469 - 970505 + G 100 -12.4 -5.47399 | overlap 970471 970473 ACCCATTTTCTCTTT TAGGCCGTTTCTTCGT CGTCC ACGAAGAAACGGGCTC TTTTTTTGAAGTTGA TERM 710 970471 - 970503 + G 100 -15 -4.36993 | overlap 970469 970473 CCATTTTCTCTTTTA GGCCGTTTCTTCGT CGTCC ACGAAGAAACGGGC TCTTTTTTTGAAGTT TERM 711 970473 - 970501 + G 90 -16.2 -2.51257 | overlap 970471 970469 ATTTTCTCTTTTAGG CCGTTTCTTCGT CGTCC ACGAAGAAACGG GCTCTTTTTTTGAAG COPRO5265_1094 970444 - 971715 + | heme biosynthesis (NirJ-2) family protein hflX 972783 - 971731 - | GTP-binding protein HflX mutL 974429 - 972801 - | DNA mismatch repair protein TERM 712 973412 - 973427 + g 79 -10.4 -3.54743 | TAGGCGCGTCATTTG GCGTGG TAGT CCACGC TTCTGATTGATAATG TERM 713 973724 - 973740 + g 72 -8.7 -3.67792 | CAGACAAAATCAGTT CTCCAAC TAT GTTGGGG TTTAAATAAATGTCC mutS 976765 - 974429 - | DNA mismatch repair protein MutS COPRO5265_1098 978063 - 976924 - | NADH-dependent butanol dehydrogenase a (bdh i) COPRO5265_1099 978176 - 979372 + | hypothetical protein COPRO5265_1100 980252 - 979395 - | integral membrane protein COPRO5265_1101 980354 - 980809 + | bacterioferritin comigratory protein, AhpC/TSA family COPRO5265_1102 980828 - 981316 + | nonheme iron-containing ferritin TERM 714 981344 - 981375 + T 100 -16 -4.62069 | opp_overlap 981336 981348, overlap 981348 CAATAAACGTTATGA CAAAGAGCCCCC AAATCAAC GGGGGCTCTTTG TTTTTCACATGACAA TERM 715 981348 - 981371 + T 100 -11 -4.87389 | opp_overlap 981336 981348, overlap 981344 AAACGTTATGACAAA GAGCCCCC AAATCAAC GGGGGCTC TTTGTTTTTCACATG TERM 716 981371 - 981348 - T 100 -11.7 -3.98236 | opp_overlap 981348 981344, overlap 981336 AAACGTTATGACAAA GAGCCCCCA AATCAA CGGGGGCTC TTTGTTTTTCACATG COPRO5265_1104 982171 - 981578 - | membrane protein TERM 717 981919 - 981907 - G 74 -5.5 -4.72497 | CACTTACTAAGAAAA GACCC TTC GAGTC AAGCTTATACAAATT mdlB2 983943 - 982168 - | ABC-type multidrug/protein/lipid transport system, ATPase component mdlB 985645 - 983936 - | ABC-type multidrug/protein/lipid transport system, ATPase component TERM 718 984517 - 984505 - G 71 -3.3 -4.87665 | opp_overlap 984505 CGCCATTTACAAAAA CCGTA TTT TCCGG TGGTTCCAGCACTCT COPRO5265_1107 986432 - 985746 - | protein GrpE (HSP-70 cofactor) gcn 987447 - 986422 - | translation initiation factor eIF-2B alpha subunit COPRO5265_1109 987989 - 987444 - | transporter, putative COPRO5265_1110 988932 - 987940 - | universally conserved protein TERM 719 989228 - 989257 + r 86 -11.4 -3.33696 | TAGTGAACCACACGG GGCTTTGCGGCC ATTTGC GGCAGCAGAGCC TTACTTCCAAGACAG lysS 990751 - 989276 - | lysyl-tRNA synthetase COPRO5265_1113 991245 - 990754 - | transcription elongation factor GreA TERM 720 991162 - 991176 + g 70 -5 -4.4773 | AACTTCTTTTCTCTT TACTTC CTT GAGGTA TTTTAATTCCTCTAA COPRO5265_1114 992305 - 991247 - | shikimate / quinate 5-dehydrogenase domain protein COPRO5265_1115 993323 - 992418 - | hypothetical protein COPRO5265_1117 993414 - 994499 + | amidohydrolase family COPRO5265_1116 994604 - 994458 - | hypothetical protein COPRO5265_1118 994621 - 995004 + | hypothetical protein COPRO5265_1119 995478 - 995386 - | hypothetical protein TERM 721 995982 - 995966 - gH 72 -6.6 -4.21827 | opp_overlap 995966 GGAAACATTGGAAAA GCAGAT TCCTT ATCTGC TGAATTCATTGATCA COPRO5265_1120 995060 - 996604 + | hypothetical protein TERM 722 998142 - 998154 + G 76 -9.1 -3.72027 | AATATGCAGCCGTCA GGGTC GAT GACCC TTCTTGGTACACAAT topB 996893 - 998950 + | DNA topoisomerase III COPRO5265_1122 998940 - 999170 + | molybdopterin-converting factor subunit 1 (MPT synthase subunit 1)(Molybdopterin synthase subunit 1) (Molybdenum cofactor biosynthesisprotein D) (Molybdopterin-converting factor small subunit) TERM 723 999284 - 999270 - g 79 -8.6 -4.29929 | AGGAAAGGTAAGAAA CCATTC TGA GAATGG TGAAGTTCAAGCCAT moaE 999208 - 999564 + | molybdopterin converting factor, subunit 2 TERM 724 999802 - 999788 - g 70 -2.1 -5.07567 | overlap 999792 CGACATGGCAAAAAA TCTAG GCTTA CCAGA AGAAGCCGCAAGAGC COPRO5265_1124 999561 - 1000115 + | hdig domain protein COPRO5265_1125 1000537 - 1000430 - | hypothetical protein COPRO5265_1126 1000128 - 1001330 + | hypothetical protein TERM 725 1001375 - 1001399 + Tr 100 -8.5 -5.03145 | opp_overlap 1001375 CCAACCAACAAAAAA GGAGCCGCC AAAAAAA GTCGGCTCC TTTTTTACAAACTTG TERM 726 1001399 - 1001375 - TR 100 -8.5 -5.5604 | opp_overlap 1001375 CCAACCAACAAAAAA GGAGCCGCC AAAAAAA GTCGGCTCC TTTTTTACAAACTTG COPRO5265_1127 1003390 - 1001423 - | ABC transporter ATP-binding protein TERM 727 1003011 - 1002973 - G 77 -9 -3.9373 | gap 1 CAGCTAAAAGGTAAA TCACAGCCA-GGGTAAG CAAAAT CTTACCGATGGCTGCGA AATCTACACCAGCAC COPRO5265_1128 1005126 - 1003387 - | ABC-type multidrug/protein/lipid transport system, membrane component COPRO5265_1129 1005637 - 1005107 - | transcriptional regulator, putative TERM 728 1005499 - 1005488 - G 80 -7.2 -4.56597 | opp_overlap 1005470 1005488 TTGTCCCGGGAAAAA GCCC TTCT GGGC TGTCATTCTAAAAAC TERM 729 1005895 - 1005908 + G 72 -5.9 -4.42514 | AGCATTACTGTTGCT GCCGG ATTA TCGGC TTATTTCTTTGTGTT TERM 730 1006510 - 1006497 - g 72 -3.1 -5.055 | GGAAGGCCTAAAAAA GGTTC TGCG AAACC GCCAAATTTGGTTTC COPRO5265_1130 1005853 - 1007100 + | transporter, major facilitator family uppS 1007110 - 1007793 + | di-trans,poly-cis-decaprenylcistransferase TERM 731 1008223 - 1008233 + G 73 -4 -4.81249 | overlap 1008198 1008229 GGGTATTGGTACCCA TTCA GTG TGAA TTTTTCGCTTTAGAA soj 1007793 - 1008557 + | sporulation initiation inhibitor protein SOJ COPRO5265_1133 1008535 - 1009374 + | stage 0 sporulation protein J TERM 732 1009503 - 1009488 - g 76 -9 -3.767 | opp_overlap 1009488 1009485 CATTTACTTAGTAAA CCCATG GACG CATGGG TGCTTAGTTCTGTGG TERM 733 1009909 - 1009924 + G 84 -7.6 -4.83169 | opp_overlap 1009923 TTATTCTTGGTTTCG CCTTCT GGGC AGAAGG TTTTTATGCCAGGCT COPRO5265_1134 1009356 - 1010090 + | transcriptional activator, putative, Baf family COPRO5265_1135 1010100 - 1011068 + | glucose-1-phosphate adenylyltransferase COPRO5265_1136 1011065 - 1012297 + | putative glucose-1-phosphate adenylyltransferase TERM 734 1012889 - 1012866 - gf 82 -3.2 -5.4505 | opp_overlap 1012859 1012867 1012875, overlap 1012867 TTGGCTAAGAAAAAA GCCTTTTCTT ACCT AAAAAAAGGT ACTTTCGCGTTACTA COPRO5265_1137 1012257 - 1013558 + | UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase, putative COPRO5265_1139 1013548 - 1014033 + | hypothetical protein COPRO5265_1138 1014306 - 1014028 - | amino acid permease, putative feoB 1016273 - 1014315 - | ferrous iron transport protein B TERM 735 1014706 - 1014682 - G 71 -10.1 -3.21962 | overlap 1014694 ATACGAGCAACGTAA CTTTGGGACAA GTC TTCTCCCAAAG GAAAAGTAAGCAATA TERM 736 1015802 - 1015790 - G 72 -9.1 -3.49924 | opp_overlap 1015789, overlap 1015781 CGGAAATCAGCACAA CTGGG AGT CCCAG CTCTTCGGACAACTT COPRO5265_1141 1016532 - 1016254 - | ferrous iron transport protein A TERM 737 1016335 - 1016353 + g 78 -5.2 -5.04385 | overlap 1016338 1016340 GAACTCCACAACTAC GGGTCCTC CAA GAGGAGTC TTTTTTACAACTGTG TERM 738 1016957 - 1016938 - g 93 -12.2 -3.72576 | TGTTGTTTTACCAAA TGTGGACG TGGA CGTCCACA CAACCACCGAAGTAA COPRO5265_1143 1016606 - 1018216 + | N-acetylmuramoyl-L-alanine amidase COPRO5265_1142 1018838 - 1018197 - | thiamine pyrophosphokinase TERM 739 1018758 - 1018727 - G 86 -11.6 -3.63991 | TACCAGCCTTAAGAA GGTGCCGGGTGC CACCATCC ACACCCAGCACC TGACTAAAGCCAAAG COPRO5265_1144 1019631 - 1018822 - | hypothetical protein uppP 1020561 - 1019770 - | undecaprenyl-diphosphatase UppP gidB 1021208 - 1020576 - | 16S rRNA methyltransferase GidB COPRO5265_1148 1024591 - 1021205 - | DNA polymerase III subunit alpha TERM 740 1022047 - 1022037 - GH 79 -4 -5.17353 | ACACGGAGCAAAAAA TCTT GAA AAGA GCTAAATGGTCCTCC TERM 741 1023765 - 1023744 - GH 76 -9.5 -3.56099 | gap 1 GAGAATTTTGGTAAA TGTTGCTCGC CTA GCG-GCAACA TGAAATCCACCATCT TERM 742 1025003 - 1025014 + GH 70 -5.8 -4.33417 | GCTCCAGAGGCTAAG GTGG AAAA CCAC TTTCTTATCACTACA baeR 1024565 - 1025257 + | putative transcriptional regulator COPRO5265_1150 1025241 - 1026113 + | putative two-component sensor histidine kinase COPRO5265_1151 1026143 - 1027051 + | phosphate-binding protein TERM 743 1027114 - 1027065 - g 72 -4.9 -4.56775 | opp_overlap 1027074 1027075, overlap 1027066 1027068 1027069 AGTCGTGCGGAAAAA GTATTCAGATTTGCCAGCACCGC AGCT GCGGTGCTGGCAAGTTTTACTGT GGCCCTCATAATCTT TERM 744 1027111 - 1027068 - g 77 -11 -3.23708 | opp_overlap 1027074 1027075, overlap 1027066 1027065 1027069 CGTGCGGAAAAAGTA TTCAGATTTGCCAGCACCGC AGCT GCGGTGCTGGCAAGTTTTAC TGTGGCCCTCATAAT TERM 745 1027110 - 1027069 - g 86 -14.5 -2.53903 | opp_overlap 1027074 1027075, overlap 1027068 1027066 1027065 GTGCGGAAAAAGTAT TCAGATTTGCCAGCACCGC AGCT GCGGTGCTGGCAAGTTTTA CTGTGGCCCTCATAA TERM 746 1027074 - 1027105 + G 100 -21 -4.3467 | opp_overlap 1027069 1027068 1027066 1027065, overlap 1027075 GAAAAAGTATTCAGA TTTGCCAGCACCGC AGCT GCGGTGCTGGCAAG TTTTACTGTGGCCCT TERM 747 1027075 - 1027104 + G 100 -22.3 -3.2032 | opp_overlap 1027069 1027068 1027066 1027065, overlap 1027074 AAAAAGTATTCAGAT TTGCCAGCACCGC AGCT GCGGTGCTGGCAA GTTTTACTGTGGCCC pstC 1027029 - 1027919 + | phosphate ABC transporter, permease protein PstC pstA 1027916 - 1028758 + | phosphate ABC transporter, permease protein PstA COPRO5265_1154 1029311 - 1029060 - | hypothetical protein TERM 748 1030134 - 1030116 - g 73 -7.4 -4.16284 | opp_overlap 1030109 ACATTGCTGAAGAAA CCTTCTTC CTA GTAGAAGG CAGTGACATAAGGCA phoU 1029512 - 1030180 + | phosphate transport system regulatory protein PhoU murB 1031045 - 1030203 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 749 1031525 - 1031509 - g 76 -5.1 -4.77036 | overlap 1031512 GCTGAGCAGCAAAAA GAAGAGA TCC TCTCTAC TGACCAAGCAATAGA TERM 750 1031522 - 1031512 - g 72 -5.4 -4.49314 | overlap 1031509 GAGCAGCAAAAAGAA GAGA TCC TCTC TACTGACCAAGCAAT COPRO5265_1157 1031095 - 1031838 + | putative polysaccharide deacetylase COPRO5265_1158 1031819 - 1032931 + | FAD binding domain, putative TERM 751 1032996 - 1032976 - f 73 -9.1 -3.45788 | overlap 1032974 TGCCATAATACAACA TCATTGCAG CAA CTGCAATAA GAACAAAAACAACGT COPRO5265_1159 1033102 - 1033683 + | membrane protein TERM 752 1033840 - 1033829 - g 72 -3 -4.96523 | AAACGAAGAAGAAAA CATT GGTC AATG TGTGCAATCGCTTTT COPRO5265_1160 1033680 - 1034795 + | glycosyl transferase TERM 753 1034868 - 1034839 - T 100 -14.4 -4.258 | opp_overlap 1034839 1034842 TTACTTACCAATAAA GAAGCCCCACAC CGAAGT ATGTGGGGCTTC TTCTTAGGTTGCTCA TERM 754 1034839 - 1034868 + T 100 -13.7 -3.74526 | opp_overlap 1034839, overlap 1034842 TTACTTACCAATAAA GAAGCCCCACA CCGAAGTA TGTGGGGCTTC TTCTTAGGTTGCTCA TERM 755 1034842 - 1034865 + T 83 -9.6 -3.99494 | opp_overlap 1034839, overlap 1034839 CTTACCAATAAAGAA GCCCCACA CCGAAGTA TGTGGGGC TTCTTCTTAGGTTGC COPRO5265_1161 1035167 - 1034898 - | hypothetical protein TERM 756 1035201 - 1035178 - R 100 -12.4 -5.9218 | opp_overlap 1035181, overlap 1035181 CACATAATAAAAAAA CAAGGGCGGC CTAC GCCGCCCTTT CGAGCTTCTATCGTT TERM 757 1035198 - 1035181 - R 100 -14.1 -4.98468 | opp_overlap 1035181, overlap 1035178 ATAATAAAAAAACAA GGGCGGC CTAC GCCGCCC TTTCGAGCTTCTATC TERM 758 1035181 - 1035198 + r 100 -14.1 -3.63305 | opp_overlap 1035178 1035181 ATAATAAAAAAACAA GGGCGGC CTAC GCCGCCC TTTCGAGCTTCTATC COPRO5265_1162 1035479 - 1035225 - | hypothetical protein COPRO5265_1163 1035524 - 1035937 + | iron-dependent repressor COPRO5265_1164 1037131 - 1036067 - | permease TERM 759 1037520 - 1037506 - g 73 -4.2 -4.83615 | overlap 1037508 TATTGGTTATAAAAA CGGTAC CCG GTACAG CAAGAAGCGTAGCGC argR 1037199 - 1037669 + | arginine repressor fusA2 1037710 - 1039698 + | translation elongation factor EF-G TERM 760 1039767 - 1039718 - f 85 -6 -5.14563 | gap 2, opp_overlap 1039724 1039729, overlap 1039723 1039724 1039725 TTTTTCACCAAAAAA GTAAACC--CGTACCCGTATACCC CGTG GGGTATACGGGTATAATAATTTAC GGAGTTATTAAAGTA TERM 761 1039760 - 1039723 - f 100 -9.9 -4.45175 | opp_overlap 1039724 1039729, overlap 1039718 1039724 1039725 CACCAAAAAAGTAAA CCCGTACCCGTATACCC CGTG GGGTATACGGGTATAAT AATTTACGGAGTTAT TERM 762 1039759 - 1039724 - f 100 -13.4 -3.25478 | opp_overlap 1039724 1039729, overlap 1039723 1039718 1039725 ACCAAAAAAGTAAAC CCGTACCCGTATACCC CGTG GGGTATACGGGTATAA TAATTTACGGAGTTA TERM 763 1039724 - 1039759 + F 79 -11.2 -2.9162 | opp_overlap 1039724 1039723 1039718 1039725, overlap 1039729 ACCAAAAAAGTAAAC CCGTACCCGTATACCC CGTG GGGTATACGGGTATAA TAATTTACGGAGTTA TERM 764 1039758 - 1039725 - f 100 -14.7 -2.5366 | opp_overlap 1039724 1039729, overlap 1039724 1039723 1039718 CCAAAAAAGTAAACC CGTACCCGTATACCC CGTG GGGTATACGGGTATA ATAATTTACGGAGTT TERM 765 1039729 - 1039754 + F 100 -17.7 -2.8934 | opp_overlap 1039725 1039724 1039723 1039718, overlap 1039724 AAAAGTAAACCCGTA CCCGTATACCC CGTG GGGTATACGGG TATAATAATTTACGG COPRO5265_1167 1039795 - 1040496 + | hypothetical protein TERM 766 1040568 - 1040511 - T 100 -13.1 -4.61648 | gap 1, opp_overlap 1040516 1040520 1040528, overlap 1040517 1040520 AATAACAACAAGAAA CATTAAGAATATAAGAAGGCTCCCAG TTTGCTT CTGGGAGCCTTTTTATATTCCTG-TG ATCATTAGCACTGAC TERM 767 1040516 - 1040564 + T 100 -18.5 -2.86164 | opp_overlap 1040511 1040517 1040520, overlap 1040520 1040528 CAACAAGAAACATTA AGAATATAAGAAGGCTCCCAG TTTGCTT CTGGGAGCCTTTTTATATTCC TGTGATCATTAGCAC TERM 768 1040563 - 1040517 - T 100 -19.8 -3.56892 | opp_overlap 1040516 1040520 1040528, overlap 1040511 1040520 AACAAGAAACATTAA GAATATAAGAAGGCTCCCAG TTTGCTT CTGGGAGCCTTTTTATATTC CTGTGATCATTAGCA TERM 769 1040560 - 1040520 - T 100 -15.7 -3.88641 | opp_overlap 1040520 1040516 1040528, overlap 1040517 1040511 AAGAAACATTAAGAA TATAAGAAGGCTCCCAG TTTGCTT CTGGGAGCCTTTTTATA TTCCTGTGATCATTA TERM 770 1040520 - 1040560 + T 100 -17.9 -3.31157 | opp_overlap 1040517 1040511 1040520, overlap 1040516 1040528 AAGAAACATTAAGAA TATAAGAAGGCTCCCAG TTTGCTT CTGGGAGCCTTTTTATA TTCCTGTGATCATTA TERM 771 1040528 - 1040552 + T 100 -12.9 -5.13344 | opp_overlap 1040520 1040517 1040511, overlap 1040520 1040516 TTAAGAATATAAGAA GGCTCCCAG TTTGCTT CTGGGAGCC TTTTTATATTCCTGT COPRO5265_1168 1041082 - 1040573 - | hypothetical protein COPRO5265_1169 1041723 - 1041085 - | NifU protein nifS 1042915 - 1041731 - | iron-sulfur cofactor synthesis protein COPRO5265_1171 1043221 - 1042955 - | hypothetical protein TERM 772 1043268 - 1043239 - R 100 -10.2 -4.7871 | gap 1, opp_overlap 1043246, overlap 1043241 1043242 1043244 AAGCATCACCAAAAA TATTATACCCCCC ATGGA GGGGGGTATA-TA CAACAGATGAGCGCT TERM 773 1043267 - 1043241 - R 90 -10.9 -4.00443 | opp_overlap 1043246, overlap 1043239 1043242 1043244 GCATCACCAAAAATA TTATACCCCCC ATGGA GGGGGGTATAT ACAACAGATGAGCGC TERM 774 1043266 - 1043242 - R 100 -14.4 -2.99543 | opp_overlap 1043246, overlap 1043241 1043239 1043244 CATCACCAAAAATAT TATACCCCCC ATGGA GGGGGGTATA TACAACAGATGAGCG TERM 775 1043264 - 1043244 - R 93 -12.6 -3.04018 | opp_overlap 1043246, overlap 1043242 1043241 1043239 TCACCAAAAATATTA TACCCCCC ATGGA GGGGGGTA TATACAACAGATGAG TERM 776 1043246 - 1043262 + r 77 -10.8 -2.87344 | opp_overlap 1043244 1043242 1043241 1043239 ACCAAAAATATTATA CCCCCC ATGGA GGGGGG TATATACAACAGATG COPRO5265_1172 1043888 - 1043301 - | indolepyruvate oxidoreductase subunit IorB (IOR)(Indolepyruvate ferredoxin oxidoreductase subunit beta) COPRO5265_1173 1045774 - 1043858 - | indolepyruvate oxidoreductase subunit IorA (IOR)(Indolepyruvate ferredoxin oxidoreductase subunit alpha) TERM 777 1044063 - 1044047 - GH 70 -7.9 -3.66908 | overlap 1044048 TCGGTCGAAAACCAA GGCTGGG CAA CCCAGCA GGTTCACACACACCC TERM 778 1044062 - 1044048 - GH 81 -11.4 -2.79823 | overlap 1044047 CGGTCGAAAACCAAG GCTGGG CAA CCCAGC AGGTTCACACACACC COPRO5265_1174 1045871 - 1047529 + | sodium-dependent phosphate transporter COPRO5265_1175 1048241 - 1047732 - | intracellular protease 1 (Intracellular protease I) tdcF 1048651 - 1048271 - | TdcF protein TERM 779 1048403 - 1048373 - G 70 -2.5 -5.03715 | opp_overlap 1048374, overlap 1048374 ATCATTTCCAAAAAA GGCTGCATAGC GCTCATTAA GCTTTGCAGCA TACGACATGTCTTTC COPRO5265_1177 1049836 - 1048682 - | transporter, major facilitator family COPRO5265_1178 1051520 - 1049772 - | maltodextrin glycosyltransferase COPRO5265_1179 1053383 - 1051599 - | molybdopterin oxidoreductase, putative formate dehydrogenase subunit TERM 780 1053274 - 1053262 - GH 78 -10.5 -3.33151 | overlap 1053260 TGCCTCAAACTAAGA GCGGC TTT GCCGC AAGTGAATCCCGAGG COPRO5265_1180 1053372 - 1054415 + | dihydrodipicolinate synthase (dhdps) COPRO5265_1181 1055513 - 1054464 - | coproporphyrinogen III oxidase lepA 1057303 - 1055513 - | GTP-binding protein LepA coaBC 1058490 - 1057267 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase COPRO5265_1184 1058636 - 1058499 - | hypothetical protein COPRO5265_1185 1059309 - 1058644 - | guanylate kinase (GMP kinase) COPRO5265_1186 1059627 - 1059310 - | protein Asr0105 COPRO5265_1187 1060703 - 1059678 - | L-threonine 3-dehydrogenase TERM 781 1059764 - 1059777 + g 74 -3.8 -5.09225 | CCTTGAAGTCAAATT GGTG CGTGAT CACC TTTTTTAAGTCCACT TERM 782 1059837 - 1059853 + g 73 -10.9 -2.69489 | opp_overlap 1059840, overlap 1059840 GTCCCATGTCTCCCA TAACCGG CGT CCGGTTA TACCTTTAATGGTTA TERM 783 1060532 - 1060512 - G 71 -7.5 -3.92641 | AACTTCACCCACAAA CTCGTGACC TAT GGTCACAGG CGGTTTCATTCGCTT lpdA 1060825 - 1062189 + | dihydrolipoyl dehydrogenase TERM 784 1062235 - 1062215 - T 100 -19.7 -5.28755 | opp_overlap 1062215 AAAGATATTAAAAAA GGGCCCCCG TTG CGGGGGCCC TTTTTGCTAATTCCT TERM 785 1062215 - 1062235 + T 100 -19.7 -4.81685 | opp_overlap 1062215 AAAGATATTAAAAAA GGGCCCCCG TTG CGGGGGCCC TTTTTGCTAATTCCT COPRO5265_1189 1063111 - 1062344 - | hypothetical protein COPRO5265_1190 1063948 - 1063121 - | PTS system, fructose(mannose)-specific IID COPRO5265_1191 1064696 - 1063941 - | putative phosphotransferase system protein TERM 786 1064658 - 1064634 - G 72 -4.9 -4.56775 | overlap 1064638 AGTTGTTCCGAAAAA CCAAGGTGC TCCAATG GCACCCAGG TAAGACAGCAAAGCA COPRO5265_1192 1065210 - 1064701 - | PTS system sorbose subfamily IIB component COPRO5265_1193 1065985 - 1065203 - | transcriptional regulator, GntR family TERM 787 1066136 - 1066176 + r 77 -10.5 -3.19642 | opp_overlap 1066146, overlap 1066146 1066148 AAAGTCTAGATTGTT TTATAAAAAAGAGCCCCCG CAC TGGGGGCCCTTTTTACTAA TTCCTCCATGGTACT TERM 788 1066166 - 1066146 - R 100 -11.8 -5.24129 | opp_overlap 1066136 1066146 1066148 TTGTTTTATAAAAAA GAGCCCCC GCACT GGGGGCCC TTTTTACTAATTCCT TERM 789 1066146 - 1066166 + r 100 -10.3 -4.81685 | opp_overlap 1066146, overlap 1066136 1066148 TTGTTTTATAAAAAA GAGCCCCCG CAC TGGGGGCCC TTTTTACTAATTCCT TERM 790 1066148 - 1066164 + r 80 -11.5 -2.68033 | opp_overlap 1066146, overlap 1066146 1066136 GTTTTATAAAAAAGA GCCCCCG CAC TGGGGGC CCTTTTTACTAATTC COPRO5265_1194 1067375 - 1066200 - | aspartate aminotransferase A (Transaminase A) (AspAT) TERM 791 1067834 - 1067844 + G 71 -6.8 -4.09243 | GGTTGTTGACTCATA CACG TAC CGTG TTTTAAGAAACTGTG TERM 792 1068033 - 1068003 - g 86 -4 -5.46657 | overlap 1068004 1068005 TATTGCAAGAAAAAA CCCCATTGTGTGGA GTG TCCACTCAATAAAA AGGAGGGGCTTCCTA TERM 793 1068035 - 1068061 + G 75 -10.1 -3.62096 | opp_overlap 1068035 TCCACTCAATAAAAA GGAGGGGCTTC CTAAA GAGTCCCCTCC TTTCAACTGCTAAAG TERM 794 1068061 - 1068035 - g 100 -8.6 -5.10461 | opp_overlap 1068035 TCCACTCAATAAAAA GGAGGGGCTTCC TAA AGAGTCCCCTCC TTTCAACTGCTAAAG mutY 1067448 - 1068074 + | endonuclease III COPRO5265_1196 1069041 - 1068094 - | pyruvate synthase subunit PorB (Pyruvate oxidoreductasebeta chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit beta) COPRO5265_1197 1070227 - 1069049 - | pyruvate synthase subunit PorA (Pyruvate oxidoreductasealpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha) COPRO5265_1198 1070514 - 1070230 - | pyruvate synthase subunit PorD (Pyruvate oxidoreductasedelta chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit delta) COPRO5265_1199 1071083 - 1070511 - | pyruvate/ketoisovalerate oxidoreductases common subunit gamma tyrS 1072283 - 1071087 - | tyrosyl-tRNA synthetase TERM 795 1073944 - 1073959 + G 71 -7.6 -3.86897 | GTATGTGATGAGTGA CATGCT TCAC AGCATG TTTATGGGCAATGCC TERM 796 1074171 - 1074139 - g 73 -4.1 -4.85599 | overlap 1074144 GGGAGCCTATAAAAA CATGACCACAAAACA TCC TGGTATGTGGCTATG GGGATACACTGCACG COPRO5265_1201 1072331 - 1074619 + | penicillin-binding protein, 1A family ctaQ 1076172 - 1074691 - | carboxypeptidase Taq COPRO5265_1203 1077641 - 1076205 - | M23 peptidase domain protein TERM 797 1077310 - 1077289 - GH 77 -3.8 -5.1101 | gap 1, opp_overlap 1077290 1077291 1077293, overlap 1077290 1077291 1077293 CTAGTACGCAAAAAA GCCACGTTA GCTTT TAACGTG-C TTGGTTTATCAACGG TERM 798 1077598 - 1077585 - GH 73 -2.4 -5.21236 | opp_overlap 1077585 AATCCATAACAAAAA CCAA GGAAAT TTGG CTTTATTCTTCTTGC TERM 799 1077724 - 1077737 + Gr 73 -5.3 -4.70453 | GAACATTGCCATCTT TAGGT TGAA ACCTA TTTTGTGTATTGGTT TERM 800 1077796 - 1077779 - gR 76 -4.1 -5.02074 | opp_overlap 1077781, overlap 1077781 CTATTTCTTAAAAAA GGTGACA GCCT TGTCATC ATTACACCAAAGAGC COPRO5265_1204 1077632 - 1078027 + | putative ABC transporter ATP-binding protein _2424 COPRO5265_1205 1078637 - 1078140 - | hypothetical protein COPRO5265_1206 1079998 - 1078832 - | proline dehydrogenase, beta subunit TERM 801 1079272 - 1079299 + g 79 -9.8 -3.75378 | opp_overlap 1079272 1079269, overlap 1079293 1079295 1079298 TGGAGAAAGATATGA CCATGGGACCGA GTAC TCGTTCCCAGGG TTCTGTTATCAGAAT COPRO5265_1207 1080276 - 1079995 - | opine oxidase subunit A (Octopine oxidase subunit A) COPRO5265_1208 1080768 - 1080283 - | dye-linked L-proline dehydrogenase gamma2 subunit COPRO5265_1211 1083645 - 1082422 - | ABC-type transport system, involved in lipoprotein release, permease component phnL 1084331 - 1083642 - | ABC-type transport system, involved in lipoprotein release, ATPase component COPRO5265_1213 1085274 - 1084336 - | membrane-fusion protein, putative TERM 802 1084863 - 1084833 - G 90 -14.8 -3.24188 | opp_overlap 1084830 1084833, overlap 1084852 GCATACCAGGACTAA CCAGTAGCTGACCT ACA ATGCCAGCTACTGG TGCTTTTACCGTAAA TERM 803 1084833 - 1084863 + g 80 -12.6 -3.09831 | opp_overlap 1084833 1084852, overlap 1084830 GCATACCAGGACTAA CCAGTAGCTGACCT ACA ATGCCAGCTACTGG TGCTTTTACCGTAAA TERM 804 1085942 - 1085919 - g 77 -9 -3.91084 | gap 1, overlap 1085920 CTACGCTGAACCAAA GGTCACTTTCA CTA TGAAAGTG-CC GAAGAATGGAAAGCT COPRO5265_1214 1085668 - 1086027 + | superoxide reductase (SOR) COPRO5265_1215 1086046 - 1086531 + | bacterioferritin TERM 805 1086545 - 1086578 + T 100 -15.4 -3.1364 | opp_overlap 1086547 1086552, overlap 1086547 1086552 AATCATAACGCCATT AAGAAAACGCCCCG CGACGA CGGGGCGTTTTCTA TTGAATGATTCAATC TERM 806 1086576 - 1086547 - T 100 -18.7 -3.19653 | opp_overlap 1086547 1086545 1086552, overlap 1086552 TCATAACGCCATTAA GAAAACGCCCCGC GACG ACGGGGCGTTTTC TATTGAATGATTCAA TERM 807 1086547 - 1086576 + T 100 -18 -3.12595 | opp_overlap 1086547 1086552, overlap 1086545 1086552 TCATAACGCCATTAA GAAAACGCCCCG CGACGA CGGGGCGTTTTC TATTGAATGATTCAA TERM 808 1086571 - 1086552 - T 100 -12.8 -4.71828 | opp_overlap 1086547 1086545 1086552, overlap 1086547 ACGCCATTAAGAAAA CGCCCCGC GACG ACGGGGCG TTTTCTATTGAATGA TERM 809 1086552 - 1086571 + T 100 -12.1 -4.68724 | opp_overlap 1086552 1086547, overlap 1086547 1086545 ACGCCATTAAGAAAA CGCCCCG CGACGA CGGGGCG TTTTCTATTGAATGA COPRO5265_1216 1087926 - 1086610 - | hypothetical protein COPRO5265_1217 1088214 - 1087978 - | hypothetical protein COPRO5265_1218 1089121 - 1088198 - | 1-phosphofructokinase, putative TERM 810 1088302 - 1088289 - G 75 -6.7 -4.41616 | AGCTCTTCAAACAAA GAGAC ATTT GTCTC TCCAATGGCTTCCGT COPRO5265_1219 1091010 - 1089118 - | copper amine oxidase N- domain family TERM 811 1090013 - 1090001 - G 73 -7.7 -4.08216 | TGATCGTCCCCAAAA CCATC GAT GATGG TACCTCTAATTGTTC uvrC 1092808 - 1091021 - | excinuclease ABC, C subunit TERM 812 1092663 - 1092698 + g 100 -18.4 -3.31461 | ATAAGGTGTTCTTTC TGGCCTGGCTGGCTAC GAGC GTAGTCAGCCAGGCGA TTGTGCAAGTCACTA COPRO5265_1221 1093497 - 1092805 - | transglycosylase SLT domain protein COPRO5265_1222 1094627 - 1093599 - | RecF/RecN/SMC N domain, putative COPRO5265_1223 1095180 - 1094605 - | metal dependent phosphohydrolase COPRO5265_1224 1096880 - 1095201 - | ribosomal protein S1 TERM 813 1096185 - 1096205 + g 77 -10.5 -3.47029 | AACCTTGGCAATATT CTTGATTGG TCT CCAGTCAAG TTCGTCTTTGGGTAC COPRO5265_1225 1097837 - 1096980 - | hypothetical protein COPRO5265_1226 1098777 - 1097812 - | hypothetical protein TERM 814 1099559 - 1099569 + G 74 -5.4 -4.55849 | CACGGTATTACATCC GAGA TCT TCTC TTTCTTTCAGTTTTC COPRO5265_1227 1098884 - 1100020 + | transporter, putative xth 1100880 - 1100128 - | exodeoxyribonuclease III alr 1101931 - 1100885 - | alanine racemase TERM 815 1101235 - 1101253 + g 71 -10.3 -2.74144 | opp_overlap 1101234, overlap 1101234 CAGGTTCCAAGATAT GCTCGTG AATGA CACGAGC CTTTAGAGATAGCAC COPRO5265_1230 1103967 - 1101964 - | bacterial extracellular solute-binding protein, family 3 TERM 816 1103230 - 1103242 + g 74 -3.3 -5.00616 | overlap 1103231 CGTATTAACGAAAGC TGGGC TGA GCTCG TTTTTTCCAAGCCAG COPRO5265_1232 1103998 - 1104444 + | deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP pyrophosphatase) COPRO5265_1231 1105994 - 1104441 - | 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (hppk), putative TERM 817 1104948 - 1104901 - G 72 -8.4 -3.66378 | opp_overlap 1104905, overlap 1104902 CATATTTGATGCAAA CCAAGCATCCGTGTCCGAACTG TCCC CATTCCAGTCACGTATGCTTGT GTGCCATCCAGCGTA TERM 818 1104947 - 1104902 - G 77 -11.9 -2.79505 | opp_overlap 1104905, overlap 1104901 ATATTTGATGCAAAC CAAGCATCCGTGTCCGAACTG TCCC CATTCCAGTCACGTATGCTTG TGTGCCATCCAGCGT COPRO5265_1233 1107190 - 1106000 - | dihydropteroate synthase (dhps) (dihydropteroatepyrophosphorylase) TERM 819 1107762 - 1107748 - g 80 -7.2 -4.57353 | GCCGACTACATAAAA CTTCTT TAC AAGAAG GGCGAAAAAGAAAGA COPRO5265_1234 1107355 - 1108569 + | hypothetical protein COPRO5265_1235 1108556 - 1108831 + | acylphosphatase TERM 820 1108862 - 1108878 + F 70 -5.9 -4.34223 | overlap 1108855 TATGTGAACGGTAAT CTTATGA TTC TCGTAAG TTTGTTAGTTGGATT COPRO5265_1236 1108865 - 1110343 + | sensory rhodopsin I transducer (HTR-I) (Methyl-accepting phototaxisprotein I) (MPP-I) rpoE 1110357 - 1110881 + | putative DNA-directed RNA polymerase TERM 821 1110948 - 1110965 + G 71 -9.9 -3.14132 | CGTATTGCCCTGGTG GTGGGTA TTCT TACCCAC TTCATGGAAAAAAGA COPRO5265_1238 1110865 - 1111515 + | hypothetical protein TERM 822 1111544 - 1111532 - f 70 -2.7 -4.99035 | CTATGTATACAAAAA CAACT TTT AGTTA TTTAGAATAAGGACT COPRO5265_1239 1111639 - 1113072 + | Fe-S oxidoreductase TERM 823 1113092 - 1113118 + F 100 -13.8 -5.1287 | opp_overlap 1113099 AGCAATGTGTTTGGC GAAGCCACCC AAAAAGA GGGTGGCTTC TTTTTTGGATGTCCC COPRO5265_1240 1113233 - 1114054 + | hydrogenase subunit gamma gltA 1114062 - 1115432 + | glutamate synthase (NADPH), homotetrameric TERM 824 1115446 - 1115423 - T 100 -13.2 -3.9398 | opp_overlap 1115417 TGATAAGTTTATAAA GGGAGCCTAA TACC CTAGGCTCCC CTGACATTGTGCACT COPRO5265_1242 1116113 - 1115460 - | transaldolase, putative COPRO5265_1243 1116863 - 1116135 - | probable 2-phosphosulfolactate phosphatase TERM 825 1116402 - 1116385 - G 78 -5.5 -4.8048 | CCCGCACAGTAAAAA TCGTCTC CAAC GAGTCGA CCTTCCTTCCCCGCA COPRO5265_1244 1117027 - 1116929 - | hypothetical protein TERM 826 1117598 - 1117625 + Gr 74 -7.8 -4.0098 | gap 1, opp_overlap 1117598 1117600 TACCGGTAAAGGAGA TATGTC-AGCCAG CTT CTGGCAAGACATA TTGTTTGGCTTCAAG COPRO5265_1246 1117011 - 1118330 + | transporter, major facilitator family COPRO5265_1245 1119988 - 1118327 - | Na+/H+ antiporter TERM 827 1119436 - 1119426 - G 79 -8.2 -4.28111 | GAGATTATGAATAAA CCCG TAA CGGG AGCCGCAGTAGCATC TERM 828 1120033 - 1120022 - H 74 -4.4 -5.00851 | ATCAATTAAACAAAA CAGA TGAT TCTG GTCATTATAGGTAGA COPRO5265_1247 1120232 - 1120597 + | hypothetical protein COPRO5265_1248 1120584 - 1121525 + | hypothetical protein TERM 829 1122286 - 1122271 - g 82 -5.4 -5.17786 | overlap 1122272 GAACAAAATGAAAAA CGCCAT TCTC ATGGCA ATGGATTACATAAAT pepT 1121564 - 1122796 + | peptidase T TERM 830 1122829 - 1122865 + T 78 -5.2 -5.0065 | gap 1, overlap 1122830 CAACATGACCCGGTG AGGAGGAACCAAAGTAC TTGC GT-TTCTGGTTCCTCCC TTTTATTTCTCGATG TERM 831 1122830 - 1122864 + T 75 -8.7 -3.59305 | gap 1, overlap 1122829 AACATGACCCGGTGA GGAGGAACCAAAGTAC TTGC GT-TTCTGGTTCCTCC CTTTTATTTCTCGAT COPRO5265_1250 1124247 - 1122868 - | AAA ATPase, central region mhpD 1124992 - 1124237 - | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) COPRO5265_1252 1125272 - 1125090 - | hypothetical protein TERM 832 1125572 - 1125593 + GH 71 -8.7 -3.29161 | CCTTCAAAGCTCTGT TCCATGGAC AATG GACCATGGA TGTTCTGGTAGCTTC TERM 833 1126933 - 1126919 - gH 80 -6.4 -4.83615 | CAGTTGGTATAAAAA CGTTCA AAG CGAACG CACTACCAGAGGACA COPRO5265_1253 1125151 - 1127331 + | copper-translocating P-type ATPase COPRO5265_1254 1127341 - 1127538 + | copper-transporting P-type ATPase TERM 834 1127718 - 1127740 + G 100 -10.6 -5.09259 | ACTGACTACATTCTT GGCAAGGG AGAAAAC CCCTTGCC TTTTATTTTAGAGTC TERM 835 1127933 - 1127943 + G 75 -3.2 -5.15634 | GATAGGTTTAGCTGG TACC ATG GGTG TTTTTTCATCGCATC TERM 836 1128099 - 1128084 - g 71 -7.6 -3.92373 | GAGGTTATTGACAAA GCAGAA GAAC TTCTGC AGTGGTACAAAGATC COPRO5265_1255 1127547 - 1128266 + | aspartate racemase TERM 837 1129081 - 1129097 + T 78 -7.3 -4.48221 | overlap 1129091 GGGACCCATTAGCCT GTTATCC CCA GGGTAAC TTTTATCCGTTGATC TERM 838 1129739 - 1129752 + T 71 -4.5 -4.7254 | overlap 1129727 TTCGGCTTCCGCCTT CGCAG AGAC CTGTG TTTTTGGTAAACAGT TERM 839 1130098 - 1130079 - T 70 -7.9 -3.61398 | CCTCGCTGCTAAGAA CGTGCTA TTCCAC TAGCACG CGTAGCTACCTTCCT TERM 840 1133228 - 1133243 + T 73 -9 -3.45849 | CGTATGAAGGTTTAG CCTCAG TTTC CTGAGG TTGTCCTCCTCTGAA COPRO5265_1260 1134012 - 1133668 - | hypothetical protein COPRO5265_1261 1134359 - 1134027 - | hypothetical protein COPRO5265_1262 1136367 - 1134460 - | oligopeptide transporter, OPT family COPRO5265_1263 1137112 - 1136459 - | hypothetical protein COPRO5265_1264 1138263 - 1137118 - | hypothetical protein COPRO5265_1265 1138882 - 1138277 - | hypothetical protein COPRO5265_1267 1138882 - 1139343 + | hypothetical protein COPRO5265_1266 1140607 - 1139303 - | CBS domain protein TERM 841 1140221 - 1140209 - G 70 -9.1 -3.4052 | opp_overlap 1140205 TGCCAAGTTAACTAA TGCCC ATG GGGCA AAGTAGTCTCTGTAC TERM 842 1140461 - 1140446 - G 70 -2.5 -4.96762 | overlap 1140449 1140450 TACAGAGGAGAAAAA GAACG TAGGAT CGTCC AACAACTTCTTAACA COPRO5265_1268 1141547 - 1140630 - | hypothetical protein TERM 843 1141495 - 1141469 - G 73 -4.3 -4.82901 | opp_overlap 1141472 1141490, overlap 1141470 1141472 GCGGGCGGACAAAAA CCACCACGGGC CAACC GCCCATGGTTT CACCAATTGCTTTTA TERM 844 1141492 - 1141472 - G 77 -10.4 -3.31915 | opp_overlap 1141472 1141490, overlap 1141470 1141469 GGCGGACAAAAACCA CCACGGGC CAACC GCCCATGG TTTCACCAATTGCTT COPRO5265_1269 1142694 - 1141549 - | hypothetical protein COPRO5265_1270 1142955 - 1142704 - | hypothetical protein COPRO5265_1271 1143079 - 1143240 + | hypothetical protein TERM 845 1143277 - 1143246 - f 100 -16 -4.05033 | opp_overlap 1143246 1143250 TGGACGTTAGAGAAA TGAAGAGCGGGCTT CTCC AAGCCAGCTCTTCA TTCTACTAAAACCCA TERM 846 1143246 - 1143277 + F 100 -16 -3.40403 | opp_overlap 1143246, overlap 1143250 TGGACGTTAGAGAAA TGAAGAGCGGGCTT CTCC AAGCCAGCTCTTCA TTCTACTAAAACCCA TERM 847 1143250 - 1143273 + F 83 -11 -3.47322 | opp_overlap 1143246, overlap 1143246 CGTTAGAGAAATGAA GAGCGGGCTT CTCC AAGCCAGCTC TTCATTCTACTAAAA TERM 848 1143726 - 1143748 + G 71 -3.4 -4.81306 | CGCTGTCTCTTATGA CCTTTCCA CACGAAC TGGCAAGG TTGTTTTTTCTTGAA COPRO5265_1272 1143395 - 1143814 + | conserved hypothetical protein TIGR00246 TERM 849 1143843 - 1143822 - Tf 100 -14.5 -4.74219 | opp_overlap 1143818 1143822 ATAAATAAATGAAAA GAGGCTGCT ATTT AGCAGCCTC TGGATTCATAATAGC TERM 850 1143822 - 1143843 + TF 100 -14.5 -2.57795 | opp_overlap 1143822, overlap 1143818 ATAAATAAATGAAAA GAGGCTGCT ATTT AGCAGCCTC TGGATTCATAATAGC COPRO5265_1273 1144269 - 1143829 - | domain of unknown function protein TERM 851 1144206 - 1144192 - Gf 84 -11.4 -3.17622 | overlap 1144190 1144188 CATGGTTATAATATA CCCCCT CAT AGGGGG TCCAGTACAACATAG TERM 852 1144830 - 1144802 - gH 93 -12.5 -3.11339 | opp_overlap 1144801, overlap 1144800 1144796 AGCAGCCAAGACATA TGCTTCATGCCTC ACG GAGGCATGGAACA ATTCATAACGCAGAA TERM 853 1144996 - 1144984 - gH 78 -6.3 -4.62336 | opp_overlap 1144971 ACTCTATGTTAAAAA GATAG ATC CTATC AGTAACACCGTTCAC TERM 854 1145113 - 1145103 - gH 79 -3.2 -5.29846 | opp_overlap 1145104, overlap 1145104 AAGTTGAAATAAAAA TCCG ATA CAGA GCACATTCTGTACCA trmU 1144238 - 1145281 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gidA 1145306 - 1147150 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA COPRO5265_1275 1148441 - 1147140 - | TldD/PmbA family TERM 855 1147912 - 1147902 - G 72 -5.4 -4.52857 | ATTTGTTACAGAAAA CCAA TAG TTGG CGTTTTCACCTTCAC tldD 1149819 - 1148434 - | TldD protein TERM 856 1149149 - 1149136 - G 74 -8.1 -3.88731 | CAATATGACAGGAAA CTCCC CACT GGGAG CAGTAACAGCGCTTA TERM 857 1149477 - 1149493 + g 76 -2.1 -5.27938 | overlap 1149478 CTTCACCAAGTTCTT GCCATGG TGT CCACGGA TTTTTCTTTAACGGT TERM 858 1149787 - 1149761 - G 85 -3.7 -5.51165 | overlap 1149762 AAAATGTCAAAAAAA TCAGGGGTTAT ATCTG ATAACTCCTGG GCTACCTTTTGCAAG COPRO5265_1278 1149985 - 1149839 - | hypothetical protein COPRO5265_1279 1149978 - 1150652 + | LysM domain protein TERM 859 1151378 - 1151345 - gT 91 -6.8 -5.55664 | gap 2, overlap 1151351 TTATTACTAAAAAAA GCAGAAGAGGCTGGTA TTGA TACCAGCCTC--CGGC CAGAACAAATTACAG TERM 860 1151374 - 1151351 - gT 100 -15.4 -3.86495 | overlap 1151345 CTAAAAAAAGCAGAA GAGGCTGGTA TTGA TACCAGCCTC CGGCCAGAACAAATT ksgA 1150607 - 1151446 + | dimethyladenosine transferase glnA 1152794 - 1151424 - | glutamine synthetase, glutamate--ammonia ligase TERM 861 1152253 - 1152233 - G 79 -11.1 -3.30159 | TTAACCTCTCCACAA TGGCTCCCC GCA GGGTAGCCA AAGTGTCAAATGGTG TERM 862 1152488 - 1152474 - G 70 -10 -3.05715 | opp_overlap 1152476 1152487, overlap 1152476 AACCGCTTTACGCAA GATCCC TCT GGGATC CAGCGGGCTGGGTTT COPRO5265_1282 1152925 - 1153665 + | hypothetical protein COPRO5265_1284 1153662 - 1154414 + | hypothetical protein COPRO5265_1283 1154502 - 1154392 - | hypothetical protein TERM 863 1155355 - 1155374 + GH 78 -10 -3.51091 | opp_overlap 1155355 1155354, overlap 1155357 1155370 GCGAGCATGCAAAAC TGTGGCGC TTTA GCGCCATA TTAGTTGTGGTTGTG TERM 864 1155357 - 1155372 + GH 78 -10.4 -3.31854 | opp_overlap 1155355 1155354, overlap 1155355 1155370 GAGCATGCAAAACTG TGGCGC TTTA GCGCCA TATTAGTTGTGGTTG TERM 865 1155743 - 1155733 - gH 72 -5.4 -4.386 | GAATGCTTTATAAAA CACT TAG AGTG GCTGAGCCCAAAAAA COPRO5265_1285 1154415 - 1156634 + | tetratricopeptide repeat domain protein COPRO5265_1286 1156678 - 1157100 + | OsmC/Ohr family protein lgt 1158314 - 1157427 - | prolipoprotein diacylglyceryl transferase COPRO5265_1288 1157093 - 1157494 + | hypothetical protein TERM 866 1157577 - 1157528 - Gf 100 -16.5 -2.6574 | opp_overlap 1157543, overlap 1157519 1157517 TAACCAGCGACAGCA GCTGTGCCGTATGGAGCCCCCAC AATG ATGGGGGCTCTATACGGAAAAAC TCCACAACAAACCTT TERM 867 1157543 - 1157562 + gF 77 -10.7 -2.87132 | opp_overlap 1157528 GCTGTGCCGTATGGA GCCCCCA CAATGA TGGGGGC TCTATACGGAAAAAC TERM 868 1158447 - 1158434 - g 70 -2.4 -4.93296 | TGACCATCAGAAAAA TTGG CTCGCC CCAA GGTGCATGGATCATT TERM 869 1158487 - 1158477 - g 74 -5.4 -4.62069 | opp_overlap 1158477 TGTGGACGGCAAAAA GGTT CTG AACC TTTCCTCTAACAACT bioF 1158358 - 1159542 + | 8-amino-7-oxononanoate synthase TERM 870 1159787 - 1159765 - g 75 -6.3 -4.4017 | opp_overlap 1159765, overlap 1159754 CCAAGCTTGAGAAAA GCAACGG GGCAAGTAA CCGTTGC TGTGCTAATTAGCCG mviN2 1159732 - 1161276 + | integral membrane protein MviN COPRO5265_1291 1162294 - 1161260 - | GTP-dependent nucleic acid-binding protein EngD COPRO5265_1293 1163132 - 1162302 - | serine protease TERM 871 1163462 - 1163437 - g 80 -6.1 -4.84311 | gap 1 TTCCACACAAGAAAA GCATCTCCCGGG CTG CCCAGC-GATGC TAGCCAAGTTCACCC COPRO5265_1294 1163185 - 1163826 + | hypothetical protein COPRO5265_1295 1164224 - 1164763 + | hypothetical protein COPRO5265_1296 1164760 - 1165887 + | hypothetical protein COPRO5265_1297 1165936 - 1166031 + | hypothetical protein TERM 872 1166124 - 1166089 - T 100 -21.4 -4.40804 | opp_overlap 1166080 1166097 GATGAGCTGATAAAA GTGGAACAGGCATGAC CGAA ATCATGCCTGTTCCAC GAAAACTCAATTTAC COPRO5265_1298 1167174 - 1166230 - | spermidine synthase 2 (putrescine aminopropyltransferase2) (papt 2) (spdsy 2) COPRO5265_1299 1167568 - 1167143 - | S-adenosylmethionine decarboxylase superfamily htrA 1168845 - 1167724 - | DO serine protease COPRO5265_1301 1169390 - 1168893 - | hypothetical protein COPRO5265_1302 1170355 - 1169387 - | hypothetical protein TERM 873 1169433 - 1169449 + g 72 -6.5 -4.30987 | GTAATAATATGTACG GGCATAG CAT CAATGCC TTTCTTCTCAGCCAT COPRO5265_1303 1172007 - 1170361 - | glycoside hydrolase, family 57 COPRO5265_1304 1173840 - 1172011 - | alpha-amylase 1 (1,4-alpha-D-glucan glucanohydrolase) TERM 874 1172952 - 1172964 + g 85 -3.3 -5.48213 | opp_overlap 1172934 1172933 GAAGCCATATGGCTT CAGAC TCT GTCAG TTTTTCTTTTACCTG COPRO5265_1305 1175413 - 1173833 - | probable alpha-amylase, GH57 family TERM 875 1175323 - 1175308 - G 76 -4 -4.99435 | opp_overlap 1175313, overlap 1175310 1175320 TGTAAGAATCAAAAA TAGCTT GGTA AAGCCA TTCTTCGCCGAAGGG TERM 876 1175602 - 1175562 - R 100 -21.3 -4.46072 | opp_overlap 1175565 CTTAAGAAATATAAA TAAGCGCCCACGGCTTTGC AGA ACCAAACCGTGGGCGCTTA AGTTGCTCAAAGGCA TERM 877 1175565 - 1175599 + r 100 -16.6 -3.20723 | gap 1, opp_overlap 1175562 AAGAAATATAAATAA GCGCCCACGGCTTTG CAGAAC CAAA-CCGTGGGCGC TTAAGTTGCTCAAAG COPRO5265_1306 1175745 - 1175650 - | hypothetical protein tnaT 1177247 - 1175745 - | sodium- and chloride-dependent transporter, TnaT TERM 878 1175869 - 1175879 + g 78 -5.4 -4.81249 | opp_overlap 1175878, overlap 1175871 GCCAAGAAAGGATAT CCTT CAT AAGG TTTTTGAATTTCAGC galT 1178413 - 1177388 - | galactose-1-phosphate uridylyltransferase COPRO5265_1309 1179834 - 1178431 - | glycogen synthase (Starch [bacterial glycogen]synthase) COPRO5265_1310 1180636 - 1179863 - | beta ureidopropionase TERM 879 1180939 - 1180929 - g 84 -8.2 -4.6821 | opp_overlap 1180928 1180929, overlap 1180930 AATGGCAACAGAAAA GGGC ATT GCCC AGTTTTATTTGGTAG ptb2 1180813 - 1181724 + | phosphate butyryltransferase TERM 880 1181786 - 1181765 - f 100 -13.7 -5.47846 | opp_overlap 1181760 1181765 AAGTAAAAAACAAAA GGGCCCTGC TTTC ACAGGGCCC TTACCTTTCTCAAGC TERM 881 1181765 - 1181786 + F 100 -13 -3.32997 | opp_overlap 1181765, overlap 1181760 AAGTAAAAAACAAAA GGGCCCTG CTTTCA CAGGGCCC TTACCTTTCTCAAGC TERM 882 1182112 - 1182102 - f 74 -6.8 -4.32067 | overlap 1182099 GACCTCACAAAATAA GGAG GTG CTCC CAAGTGTCACAGTTA TERM 883 1182645 - 1182624 - g 76 -8.7 -4.16842 | TTCACGTCGAAGAAA TAGATGGCG AAGA CGCCGTCTA CATCATGGAAAAAGT COPRO5265_1312 1182116 - 1182667 + | bifunctional protein PyrR pyrB 1182758 - 1183669 + | aspartate carbamoyltransferase COPRO5265_1314 1183666 - 1184904 + | dihydroorotase (DHOase) TERM 884 1184956 - 1184995 + G 74 -7.1 -4.30441 | gap 1, overlap 1184956 1184990 TGTAGTTGTTTTTTT C-GGGCCGGTTGCAGAAG AAAAC CTTCCGCAACCGGGGCAG TTTTACATGTTCTAC COPRO5265_1315 1184894 - 1185583 + | dihydroorotate dehydrogenase electron transfer subunit COPRO5265_1316 1185562 - 1186386 + | dihydroorotate dehydrogenase (dihydroorotate oxidase)(dhodehase) (dhodase) (dhod) pyrF 1186393 - 1187100 + | orotidine 5'-phosphate decarboxylase pyrE 1187097 - 1187684 + | orotate phosphoribosyltransferase COPRO5265_1318 1188755 - 1187679 - | cystathionine gamma-lyase, putative COPRO5265_1320 1189544 - 1188759 - | serine/threonine protein phosphatase cef 1189719 - 1190618 + | cation efflux system protein (zinc/cadmium) COPRO5265_1322 1190669 - 1191295 + | phosphoglycerate mutase TERM 885 1191329 - 1191319 - f 71 -6.8 -4.21827 | opp_overlap 1191328 TCAAACACTGTAAAA GGTG CCA CACC ACTCGGAGGTTCGGT COPRO5265_1323 1191356 - 1191970 + | probable phosphoglycerate mutase gpmb (phosphoglyceromutase) (pgam), putative COPRO5265_1324 1193272 - 1192232 - | alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS), putative TERM 886 1192960 - 1192950 - G 74 -6.8 -4.31329 | TCAAAAATCGCAAAA CCCT CTG AGGG CCATCCGTAAAGCTG COPRO5265_1325 1194108 - 1193269 - | HAD-superfamily hydrolase subfamily IA, variant 3 COPRO5265_1326 1195440 - 1194454 - | hydrolase, carbon-nitrogen family COPRO5265_1327 1195927 - 1195433 - | hypothetical protein TERM 887 1195650 - 1195629 - GH 78 -5.9 -4.90079 | ATGCCAACAATAAAA TTCCCTTCC TCGT GGAAGAAAA CCTCAATAGCAACGA COPRO5265_1328 1195640 - 1195747 + | hypothetical protein COPRO5265_1329 1196627 - 1195998 - | hypothetical protein nagA1 1197603 - 1196671 - | N-acetylglucosamine-6-phosphate deacetylase TERM 888 1196972 - 1196940 - G 76 -4.3 -4.9792 | gap 1, overlap 1196941 CATTGGACACAAAAA CTACTCTTGAAAGC CCTTTC GCCTTC-AGAGTAA GCCCCACAGTAGCAG COPRO5265_1331 1197979 - 1197668 - | hypothetical protein COPRO5265_1332 1198237 - 1198031 - | hypothetical protein COPRO5265_1333 1199220 - 1198279 - | nucleoside-diphosphate-sugar epimerase TERM 889 1199132 - 1199120 - G 71 -7.7 -3.91897 | opp_overlap 1199119 TCGCCCATGGATAAA TCGTC TAT GACGA CTACTTCAGCTCCTT COPRO5265_1334 1200042 - 1199350 - | phosphoribosyl transferase domain protein bioY 1200123 - 1200668 + | BioY protein COPRO5265_1336 1201507 - 1200851 - | snare associated golgi protein COPRO5265_1337 1201791 - 1201690 - | hypothetical protein COPRO5265_1338 1202588 - 1201773 - | transporter, auxin efflux carrier (AEC) family TERM 890 1201894 - 1201880 - G 80 -10 -3.85698 | opp_overlap 1201880, overlap 1201889 TTTGTTCCCCATAAA TGGTGG AAA CCACCA TGGTTGGCATGCTAC COPRO5265_1339 1204563 - 1202671 - | hypothetical protein TERM 891 1203772 - 1203762 - G 72 -5.4 -4.41348 | opp_overlap 1203762 CGTCTGCCAAAGAAA GAAC ACT GTTC TTGTAATTTGTGCCT TERM 892 1203978 - 1203951 - G 70 -9.2 -3.45027 | opp_overlap 1203951, overlap 1203949 AGGGTTCACCAAATA CTGATGGAAATG CAAT CATTACCACCAG TTTATCAGTCTTCAC TERM 893 1204544 - 1204532 - G 72 -4.8 -4.68545 | ACCGAAGATATAAAA GTGC TTAAT GCAC AGTACTTCATAAAGC COPRO5265_1340 1204623 - 1205486 + | putative methyl transferase COPRO5265_1341 1205594 - 1208086 + | maltodextrin phosphorylase TERM 894 1208133 - 1208106 - T 100 -16.3 -5.63517 | opp_overlap 1208106 TTTCGAAAGAAAAAA GGCGGCCGCCT ATGCTA AAGCGGCCGCC TTTTTTGCAATTGCC TERM 895 1208106 - 1208133 + T 100 -14.1 -5.09426 | opp_overlap 1208106 TTTCGAAAGAAAAAA GGCGGCCGCCT ATGCTA AAGCGGCCGCC TTTTTTGCAATTGCC ptsP 1209776 - 1208115 - | phosphoenolpyruvate-protein phosphotransferase TERM 896 1208531 - 1208555 + g 75 -6.4 -4.4773 | opp_overlap 1208505 1208531 CATGCTCATCGAAAG GCTGGCCTTC TTCAC GAAGCTCAGC TTTTGCTTCCTCTAG TERM 897 1208716 - 1208733 + g 74 -7 -4.35524 | TATCTTATAGCTCTC CAACCC AAGAAA GGGTTG TTTTCCCTTTGCAAG hpr 1210057 - 1209773 - | phosphocarrier protein COPRO5265_1344 1210499 - 1210086 - | hemerythrin COPRO5265_1345 1210996 - 1210589 - | DcrH TERM 898 1211721 - 1211709 - g 72 -5.5 -4.55093 | GCAGACAATAATAAA GAGCT TTA AGCCC ACCCACATCATTTAT COPRO5265_1346 1211248 - 1212108 + | GlcNAc-PI de-N-acetylase family COPRO5265_1347 1213266 - 1212109 - | amidohydrolase subfamily TERM 899 1213494 - 1213484 - g 72 -5.4 -4.39166 | TGTTACATACTAAAA TCAG GTA CTGA CATCGCAGTAGTTGA COPRO5265_1348 1213427 - 1213969 + | metallo-beta-lactamase domain protein, putative TERM 900 1215481 - 1215467 - g 70 -2.1 -5.07275 | GTACACACAGAAAAA TCGGA TTTCT TCCAA CAATTCCAAGGCTTA COPRO5265_1349 1214180 - 1215544 + | RNA-metabolising metallo-beta-lactamase family TERM 901 1216892 - 1216877 - g 73 -7.6 -4.11664 | CTTAGAAGAAGTAAA TGCCAT AAGA ATGGCA GCTCAAACGTTGGCA COPRO5265_1350 1215672 - 1216964 + | metal dependent phosphohydrolase TERM 902 1216982 - 1216947 - f 73 -5.6 -4.50358 | gap 1, opp_overlap 1216974, overlap 1216948 1216972 1216974 ACTGAAATATCAAAA TCGTCC-CCTATTTCAT AAA ATGAAATAGGAGGAGTA GTAACTCATCCTTGC COPRO5265_1351 1217055 - 1217534 + | hypothetical protein COPRO5265_1352 1217549 - 1218679 + | alanine--glyoxylate aminotransferase 1 TERM 903 1218743 - 1218769 + T 100 -18.1 -4.2243 | opp_overlap 1218743 GCACCAGACAAAAAA GGGGCTGGCAA AAACA TTGCCAGCCCC TTTTCAAGTATTTAT TERM 904 1218769 - 1218743 - T 100 -18.1 -5.39721 | opp_overlap 1218743 GCACCAGACAAAAAA GGGGCTGGCAA AAACA TTGCCAGCCCC TTTTCAAGTATTTAT pacL1 1221347 - 1218792 - | cation-transporting ATPase A, P type (ATPase, E1-E2 type) pcp 1222182 - 1221559 - | pyroglutamyl-peptidase I TERM 905 1222096 - 1222129 + g 72 -5.4 -4.38116 | gap 2, overlap 1222097 CCCAGCAATGGTCTT GCCTTCC-AGC-TGCT TTAC AGCAAGCTCGGAAGGA TTTACTTTTTCTCCA TERM 906 1222161 - 1222151 - G 74 -6.8 -4.25104 | TTTTCTCCACCAAAA GGCT CGA AGCC TGTCAGTAAAATCCT COPRO5265_1355 1223133 - 1222204 - | permease TERM 907 1222253 - 1222236 - G 88 -8.5 -4.78661 | ACGCAAAAATCAAAA TGGTGAT CCAC ATCACCA CAGCAACAGGAGCCT TERM 908 1222629 - 1222605 - G 88 -8.5 -4.78107 | overlap 1222626 CAGCAGCATTAAAAA CAGCACCTAGC GCA GCCAAGAGCTG AGGCAACGTGGCTGC COPRO5265_1356 1223812 - 1223120 - | Mn-containing catalase TERM 909 1224362 - 1224328 - R 90 -11.5 -3.60475 | gap 1, opp_overlap 1224322 1224330 1224332, overlap 1224315 1224332 AACCGTCACTTTAAA GGA-AGAGTGGCGGCA AAAA TGCCGCCACCCTGTTC TTCATAATTCTTTGG TERM 910 1224330 - 1224359 + r 100 -12.1 -3.79396 | opp_overlap 1224315 1224328 1224332, overlap 1224322 1224332 CCGTCACTTTAAAGG AAGAGTGGCGGCA AAAA TGCCGCCACCCTG TTCTTCATAATTCTT TERM 911 1224332 - 1224357 + r 100 -14.7 -3.46813 | opp_overlap 1224315 1224328 1224332, overlap 1224330 1224322 GTCACTTTAAAGGAA GAGTGGCGGCA AAAA TGCCGCCACCC TGTTCTTCATAATTC TERM 912 1224357 - 1224332 - R 100 -16.9 -3.53031 | opp_overlap 1224332 1224330 1224322, overlap 1224315 1224328 GTCACTTTAAAGGAA GAGTGGCGGCA AAAA TGCCGCCACCC TGTTCTTCATAATTC COPRO5265_1357 1225358 - 1224390 - | 2-oxoisovalerate dehydrogenase subunit beta (branched-chain alpha-keto acid dehydrogenase e1 component beta chain) (bckdhe1-beta) TERM 913 1225422 - 1225392 - H 75 -8.5 -3.87641 | opp_overlap 1225399 AATATGTCTTAGAAA TTATCAAGAAGTT TTTAT AGCTTCTTGATAA TAAGGTGTGCCTTTG TERM 914 1225595 - 1225612 + H 71 -8.3 -3.4678 | CCTGGAGTCAGCAGG CCAGGGG TGCA CCCCCGG TTGTCCTGTCAAGCT TERM 915 1226792 - 1226771 - g 82 -10.9 -3.54424 | GGTCATGGCCGCAAA CTCGTTGCG GGTG CACAACGAG GAATACAAGGCCTAT COPRO5265_1358 1225707 - 1226942 + | transposase TERM 916 1227155 - 1227176 + T 81 -7.3 -4.7078 | opp_overlap 1227155 1227171 GCACAAAAATAAAAA GCCTTCCTT GCAA AAGGAAAGC TTTTTCAGTCATTCA TERM 917 1227176 - 1227155 - T 100 -9.5 -5.69262 | opp_overlap 1227155, overlap 1227171 GCACAAAAATAAAAA GCCTTCCTT GCAA AAGGAAAGC TTTTTCAGTCATTCA COPRO5265_1359 1228045 - 1227440 - | biotin-[acetyl-CoA-carboxylase] ligase COPRO5265_1360 1228306 - 1228205 - | hypothetical protein TERM 918 1228526 - 1228501 - R 100 -12.6 -4.66833 | opp_overlap 1228493 1228488 1228509, overlap 1228517 TGTCAATGTCAAAAA GCCTGCCGGA TTAAAC TCCGACAGGC TTCGGACTTTGAATC osmC 1228982 - 1228542 - | conserved protein with OsmC domain TERM 919 1229240 - 1229209 - R 83 -11 -3.41134 | opp_overlap 1229209 1229217 1229219, overlap 1229217 ATATTTATGAATCAA TTAAAAAAGCCCCC TTCA AGGGGCTTTTTTCA ATTCCTCTTCCAGGT TERM 920 1229209 - 1229240 + r 74 -10.3 -2.61728 | opp_overlap 1229209 1229217, overlap 1229217 1229219 ATATTTATGAATCAA TTAAAAAAGCCCC CTTCAA GGGGCTTTTTTCA ATTCCTCTTCCAGGT TERM 921 1229217 - 1229232 + r 90 -7.5 -5.17576 | opp_overlap 1229217 1229209, overlap 1229209 1229219 GAATCAATTAAAAAA GCCCC CTTCAA GGGGC TTTTTTCAATTCCTC TERM 922 1229232 - 1229217 - R 100 -8.2 -5.32565 | opp_overlap 1229209 1229217 1229219, overlap 1229209 GAATCAATTAAAAAA GCCCCC TTCA AGGGGC TTTTTTCAATTCCTC TERM 923 1229219 - 1229231 + r 75 -9.1 -3.69461 | opp_overlap 1229217 1229209, overlap 1229217 1229209 ATCAATTAAAAAAGC CCCCT TCA AGGGG CTTTTTTCAATTCCT COPRO5265_1362 1229742 - 1229224 - | Appr-1-p processing enzyme family protein COPRO5265_1363 1230044 - 1229736 - | hypothetical protein pacL2 1232760 - 1230124 - | cation-transporting ATPase TERM 924 1231294 - 1231304 + g 83 -4 -5.32599 | TCCCATATCCTCGTT TATC CGG GATA TTTTTCTCTTTTCTG TERM 925 1232618 - 1232601 - G 71 -7 -4.07568 | opp_overlap 1232601 TTGTTGCTCCTAAAA GCACCA GGGTGA TGGTGC TTTTAAACTGGTTGA TERM 926 1232601 - 1232618 + g 71 -7 -4.17023 | opp_overlap 1232601 TTGTTGCTCCTAAAA GCACCA GGGTGA TGGTGC TTTTAAACTGGTTGA COPRO5265_1365 1233359 - 1232829 - | spore maturation protein B COPRO5265_1366 1233958 - 1233365 - | spore maturation protein A TERM 927 1233526 - 1233540 + g 73 -11.4 -2.59797 | overlap 1233525 1233524 TTATCGTCGCGGGTA CCAGCG TCA CGCTGG ATGTATTTATGGCAA TERM 928 1234021 - 1233991 - H 75 -8.5 -3.87641 | opp_overlap 1233998 AATATGTCTTAGAAA TTATCAAGAAGTT TTTAT AGCTTCTTGATAA TAAGGTGTGCCTTTG TERM 929 1234193 - 1234210 + H 71 -8.3 -3.4678 | CCTGGAGTCAGCAGG CCAGGGG TGCA CCCCCGG TTGTCCTGTCAAGCT TERM 930 1235390 - 1235369 - g 82 -10.9 -3.54424 | GGTCATGGCCGCAAA CTCGTTGCG GGTG CACAACGAG GAATACAAGGCCTAT COPRO5265_1367 1234305 - 1235540 + | transposase COPRO5265_1368 1236667 - 1235678 - | TPP-dependent acetoin dehydrogenase alpha-subunit COPRO5265_1369 1236753 - 1236890 + | hypothetical protein COPRO5265_1370 1238085 - 1237120 - | acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta (acetoin:dcpip oxidoreductase-beta) (ao:dcpip or) (tpp-dependent acetoin dehydrogenase e1 subunit beta) TERM 931 1238030 - 1238053 + g 74 -8.2 -3.97368 | ACTTTTTCGTCTCTT CTAAGCTCTT CTCT GAGAGCTTGG TTTATGGCTTGAAGA COPRO5265_1371 1239088 - 1238099 - | TPP-dependent acetoin dehydrogenase alpha-subunit TERM 932 1239016 - 1239049 + g 70 -5.3 -4.55287 | gap 1, opp_overlap 1239020 1239021, overlap 1239020 GATTGGACAGCTGAA CTAATCTCTCCTCTGC TTG GCGGAGGAGA-ACAAG TTTTCTGTACATCCA TERM 933 1239045 - 1239021 - G 71 -10.7 -2.6175 | opp_overlap 1239020 1239016, overlap 1239020 GACAGCTGAACTAAT CTCTCCTCTGC TTG GCGGAGGAGAA CAAGTTTTCTGTACA COPRO5265_1372 1239380 - 1239144 - | dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2)(Dihydrolipoamide succinyltransferase component of 2-oxoglutaratedehydrogenase complex) pruA 1239768 - 1241399 + | 1-pyrroline-5-carboxylate dehydrogenase TERM 934 1241427 - 1241453 + F 100 -13.8 -6.04324 | CATAAATAGCATTAG GGAGAAGCATCT TCT GGGTGCTTCTCC TTTTTTGTTTTTTCG proP2 1241507 - 1242895 + | permeases of the major facilitator superfamily TERM 935 1243766 - 1243777 + G 76 -4.4 -4.98857 | GAAGTGATGGTAGAC CTGA GCGA TCAG TTTTTCTGCTTCGCT COPRO5265_1375 1243604 - 1244665 + | hydrolase, alpha/beta fold family, putative COPRO5265_1376 1244686 - 1245675 + | 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 (3-oxoacyl-[acyl-carrier-protein] synthase III protein 1) (Beta-ketoacyl-ACP synthase III 1) (KAS III 1) (bFabH1) TERM 936 1246345 - 1246325 - g 83 -9 -4.2535 | overlap 1246318 AGATGATAGGTAAAA CACCCATG GGGCG CATGGGCG AACCAAAGGAAGTCG fabG2 1245703 - 1246446 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 937 1246505 - 1246480 - g 72 -2.7 -5.07652 | gap 1, opp_overlap 1246486 1246488, overlap 1246486 1246498 GGCGGGAAAATAAAA TGAAAAGAGTCT TAA AGACTCTGTT-A GGAGAGAACTTCAGT TERM 938 1246500 - 1246486 - g 88 -8.6 -4.83677 | opp_overlap 1246486 1246488, overlap 1246480 1246498 AAAATAAAATGAAAA GAGTCT TAA AGACTC TGTTAGGAGAGAACT TERM 939 1248060 - 1248050 - g 74 -5.4 -4.7173 | CATGACAGTGAAAAA CAAG GAA CTTG TAAAGATTAGCGATT COPRO5265_1378 1246479 - 1248095 + | putative branched chain amino acid ABC transporter substrate-binding protein TERM 940 1248142 - 1248119 - g 93 -12.4 -3.83347 | overlap 1248121 ATACCCCAAACAGAA TAGAGGGGGC TATA GCCCCCTCTG CACGGGAAAGCATAG TERM 941 1248140 - 1248121 - g 100 -15 -3.49634 | overlap 1248119 ACCCCAAACAGAATA GAGGGGGC TATA GCCCCCTC TGCACGGGAAAGCAT COPRO5265_1379 1248100 - 1248210 + | hypothetical protein livG 1248197 - 1248940 + | branched-chain amino acid transport ATP-binding protein LivG COPRO5265_1381 1248940 - 1249653 + | branched chain amino acid ABC transporter ATP-binding protein COPRO5265_1382 1249646 - 1250506 + | branched-chain amino acid ABC transporter permease protein COPRO5265_1383 1250506 - 1251459 + | branched-chain amino acid ABC transporter, permease protein COPRO5265_1384 1251459 - 1252682 + | TetR family transcriptional regulator COPRO5265_1385 1252660 - 1253958 + | 4-hydroxybutyrate coenzyme A transferase TERM 942 1254928 - 1254918 - g 72 -5.4 -4.44046 | TCTATTTGAAATAAA CGAA GCT TTCG CAGCCATTGCCATTG COPRO5265_1386 1253977 - 1255149 + | acetyl-CoA acetyltransferase (Acetoacetyl-CoA thiolase) TERM 943 1255167 - 1255199 + F 100 -9.2 -4.7416 | gap 1, opp_overlap 1255167 1255170, overlap 1255171 ACCTCCTATGTTAAA GAAGTGGGACTCCCG ATGT CAGG-GTCCCATTTC TTTTTAAGGTTTTGA TERM 944 1255199 - 1255167 - f 78 -9.2 -3.60098 | gap 1, opp_overlap 1255167 1255171, overlap 1255170 ACCTCCTATGTTAAA GAAGTGGGACTCCCG ATGT CAGG-GTCCCATTTC TTTTTAAGGTTTTGA TERM 945 1255171 - 1255195 + F 80 -6.4 -4.88293 | gap 1, opp_overlap 1255170 1255167, overlap 1255167 CCTATGTTAAAGAAG TGGGACTCCCG ATGT CAGG-GTCCCA TTTCTTTTTAAGGTT TERM 946 1256577 - 1256565 - g 72 -4.8 -4.67353 | GCAGCCATGGAAAAA CTCG CTAAT CGAG AAGGAAAATTGGGAG COPRO5265_1387 1255377 - 1257263 + | tungsten-containing aldehyde ferredoxin oxidoreductase TERM 947 1257285 - 1257315 + T 91 -10.5 -4.08945 | gap 1, opp_overlap 1257283 1257289, overlap 1257289 CTGCCCTAAGAAACT AG-AAGGGGCCACT ACTA AGTGGCCCCTTGCC TTTTACACGACTAAT TERM 948 1257310 - 1257289 - T 100 -15.9 -3.68962 | opp_overlap 1257285 1257289, overlap 1257283 CCTAAGAAACTAGAA GGGGCCACT ACTA AGTGGCCCC TTGCCTTTTACACGA TERM 949 1257289 - 1257310 + T 100 -15.9 -3.36823 | opp_overlap 1257289 1257283, overlap 1257285 CCTAAGAAACTAGAA GGGGCCACT ACTA AGTGGCCCC TTGCCTTTTACACGA COPRO5265_1388 1257764 - 1257318 - | ABC transporter, ATP-binding protein TERM 950 1258019 - 1258000 - H 71 -4.9 -4.71482 | opp_overlap 1257986 1258016 ACCAAAGGTGAAAAA CCGTTGG ATTTCG CCACCGG GAAGAACTTTCGGTG TERM 951 1258072 - 1258089 + H 76 -9.9 -3.30124 | CAGCAACGGGATTTG GTAGCCT TTTA AGGCTAC TTATGAGAAATAAAA TERM 952 1259202 - 1259190 - g 73 -7.7 -4.13271 | opp_overlap 1259189, overlap 1259185 TACATAATAACCAAA TGGCT GGA AGCCA CTCCTTGGGGCAAAT COPRO5265_1389 1258176 - 1259231 + | conserved membrane protein, putative COPRO5265_1390 1259861 - 1259508 - | redox-active disulfide protein 2 COPRO5265_1391 1260925 - 1259912 - | permease TERM 953 1259954 - 1259944 - G 73 -4 -4.7373 | GGAGCGCATTAAAAA TGTA GCC TACA ACCATGATGCCACCG COPRO5265_1392 1261197 - 1260946 - | arsenical resistance operon repressor TERM 954 1261037 - 1261079 + g 76 -8.5 -4.07568 | gap 1, opp_overlap 1261037, overlap 1261044 GCTAAGGCGAAGCCA GCAGGGTCGATGGAATAGTG GACC CACT-TTCCCTCGTTTCTGC TTTTCACCAAACCGG TERM 955 1261044 - 1261072 + g 74 -6.8 -4.208 | gap 1, opp_overlap 1261037, overlap 1261037 CGAAGCCAGCAGGGT CGATGGAATAGTG GACC CACT-TTCCCTCG TTTCTGCTTTTCACC COPRO5265_1393 1262582 - 1261791 - | phosphoesterase COPRO5265_1394 1263145 - 1262723 - | hypothetical protein TERM 956 1262963 - 1262941 - G 73 -7.8 -4.0825 | opp_overlap 1262950, overlap 1262942 CTTCCAAGGAAATAA CTTCCATCAG TTG CTGATAGAAA CTCTTGGTCACATAC COPRO5265_1395 1263750 - 1263544 - | hypothetical protein COPRO5265_1396 1263946 - 1263851 - | hypothetical protein TERM 957 1264310 - 1264329 + H 86 -12.2 -3.17714 | CTAGAAACTTTTTAA CTGGAGGA CTAA TCCTCCAG TTCCTCCAAGTTTCA COPRO5265_1431 1265066 - 1266193 + | protease COPRO5265_1432 1266168 - 1266584 + | copper amine oxidase N- domain superfamily COPRO5265_1433 1266765 - 1266652 - | hypothetical protein COPRO5265_1434 1266581 - 1266799 + | hypothetical protein COPRO5265_1435 1266961 - 1266806 - | hypothetical protein TERM 958 1267010 - 1266985 - R 72 -7.7 -3.80855 | gap 1, opp_overlap 1266985, overlap 1266981 TCGTGTAAAAATTAA CACTGGGA-ATT TAT AACATCCCAGTG TTTTTAAGCTCATCT TERM 959 1266985 - 1267010 + r 77 -6.2 -4.63928 | opp_overlap 1266981 1266985 TCGTGTAAAAATTAA CACTGGGA ATTTATAACA TCCCAGTG TTTTTAAGCTCATCT COPRO5265_1436 1267893 - 1267198 - | hypothetical protein COPRO5265_1437 1269929 - 1267893 - | type I restriction/modification enzyme TERM 960 1269331 - 1269320 - GR 75 -5.8 -4.59511 | overlap 1269309 AATACGGCTGAAAAA TGCC TGCC GGCA TGGAAAAGACAGCTT COPRO5265_1438 1270506 - 1269895 - | HsdM, putative COPRO5265_1439 1272767 - 1270521 - | type I restriction-modification system, R subunit TERM 961 1270581 - 1270562 - G 74 -8.6 -3.86346 | TTATCTCGTCATAAA GCTGAACA AATT TGTCCAGC GAACCGAATAGTCCC COPRO5265_1440 1273417 - 1273217 - | hypothetical protein COPRO5265_1445 1274705 - 1273722 - | putative DNA methylase hsdR 1275642 - 1274710 - | type II restriction enzyme R protein COPRO5265_1447 1276579 - 1275632 - | modification methylase MjaIII (Adenine-specificmethyltransferase MjaIII) (M.MjaIII) cas2 1277226 - 1276963 - | CRISPR-associated protein Cas2 COPRO5265_1455 1277385 - 1277236 - | putative CRISPR-associated protein Cas1 COPRO5265_1456 1277743 - 1277387 - | hypothetical protein TERM 962 1277593 - 1277571 - GH 78 -4.8 -5.0133 | TATGCGGCCAAAAAA GAGGTCCC AAGTTGA AGGACCCC AAGCATTTGCATAAA COPRO5265_1457 1277715 - 1279121 + | copper amine oxidase N- domain family TERM 963 1279154 - 1279125 - TR 100 -9.3 -5.34309 | gap 1, opp_overlap 1279124 1279125 1279127, overlap 1279126 ATCAGGAAATAAAAA GCGCCCCACCA-AG GGG CTCTGGTGAGGCGA CATTGTTTTTTATTT TERM 964 1279153 - 1279126 - TR 100 -12.8 -3.78958 | gap 1, opp_overlap 1279125 1279124 1279127, overlap 1279125 TCAGGAAATAAAAAG CGCCCCACCA-AG GGG CTCTGGTGAGGCG ACATTGTTTTTTATT COPRO5265_1458 1281155 - 1279176 - | hypothetical protein COPRO5265_1459 1281473 - 1281309 - | hypothetical protein COPRO5265_1460 1284247 - 1281797 - | peptidase, M56 family protein TERM 965 1282759 - 1282743 - G 80 -6.5 -4.79352 | GTAGCTACAATAAAA GGCTCAC TTT GTGATCC AGCTTCTGGTAAAAC COPRO5265_1461 1284630 - 1284244 - | penicillinase repressor (Regulatory protein BlaI) (Beta-lactamaserepressor protein) COPRO5265_1462 1285270 - 1286793 + | hypothetical protein COPRO5265_1463 1286951 - 1288702 + | hypothetical protein TERM 966 1288787 - 1288761 - T 100 -12.3 -4.33785 | opp_overlap 1288759, overlap 1288758 ATATCTATAAAAGAA GCGGCCCCT ACTTACCAA AGGGGCCGC CATGCTTTCACCTAC COPRO5265_1464 1289692 - 1288814 - | D-ribose-binding periplasmic protein COPRO5265_1465 1289792 - 1289664 - | hypothetical protein COPRO5265_1466 1290776 - 1289835 - | ribose transport system permease protein RbsC rbsA 1292271 - 1290763 - | ribose transport ATP-binding protein RbsA COPRO5265_1468 1292667 - 1292272 - | high affinity ribose transport protein RbsD rbsK 1293566 - 1292664 - | ribokinase COPRO5265_1470 1294573 - 1293566 - | catabolite control protein A (Glucose-resistance amylase regulator) TERM 967 1294629 - 1294608 - H 70 -5.9 -4.25283 | opp_overlap 1294609, overlap 1294609 ATTTCTTTACGAAAA CGTTAAACG AAAA CGTTTAACT ACATTTTAAAGTACC TERM 968 1294609 - 1294628 + H 70 -9.4 -2.75577 | opp_overlap 1294608 1294609 TTTCTTTACGAAAAC GTTAAACG AAAA CGTTTAAC TACATTTTAAAGTAC TERM 969 1294628 - 1294609 - H 72 -9.4 -3.14848 | opp_overlap 1294609, overlap 1294608 TTTCTTTACGAAAAC GTTAAACG AAAA CGTTTAAC TACATTTTAAAGTAC COPRO5265_1471 1294977 - 1297235 + | papain family cysteine protease, putative TERM 970 1297294 - 1297255 - f 70 -8 -3.72407 | gap 1, opp_overlap 1297255, overlap 1297253 AGAAAGCGTAAAAGA GAGAGACATGG-AGCTCAA CTA TTACGTTTCCATGTCTCTC TTCGGTTTTATTTTC COPRO5265_1472 1297383 - 1297481 + | hypothetical protein COPRO5265_1473 1297558 - 1299897 + | protease, putative TERM 971 1299939 - 1299961 + F 100 -17.8 -5.72254 | GCTCATAGCTATTTT GGGGAGAGGA CTT TCCTCTCCCC TTTTTTGTTCTTTAA COPRO5265_1474 1300171 - 1303005 + | minor extracellular protease, putative TERM 972 1303023 - 1303043 + F 100 -11.8 -4.56775 | opp_overlap 1303022 1303021 CAACTACTTATAAGG GGGCTGGC CGAAA GCCGGCCC TTTTTCACCAAGCCT COPRO5265_1475 1303188 - 1304126 + | hypothetical protein TERM 973 1304209 - 1304240 + T 70 -9.4 -2.87564 | opp_overlap 1304199 TAACAGCGTTGGGAT TTTGCTGGGAGGCC CAGA GACTTCCCAGCGAG TGTATAAACAAGTAA COPRO5265_1476 1305234 - 1304473 - | uridine phosphorylase (UrdPase) (UPase) TERM 974 1304697 - 1304675 - G 78 -6.3 -4.59342 | CCTATGACAAACAAA GCTGCTG TCTCCATAT CAGCAGC CAATACGCCTCTCTC TERM 975 1305141 - 1305130 - G 74 -5.8 -4.69664 | opp_overlap 1305130 CACATCATCTAAAAA CGCA GCAA TGCG TTTAACCCTACCCGG nemA 1306289 - 1305267 - | NADH:flavin oxidoreductase, old yellow enzyme family COPRO5265_1478 1306535 - 1306627 + | hypothetical protein COPRO5265_1479 1307063 - 1307176 + | hypothetical protein corA 1307210 - 1308178 + | magnesium and cobalt transport protein CorA TERM 976 1308521 - 1308503 - g 86 -5.2 -5.50925 | overlap 1308504 AACGAATACAAAAAA GCTCACCC AGA GGATGAGA TAATCGAATTGGATT TERM 977 1308520 - 1308504 - g 74 -8.7 -3.88115 | overlap 1308503 ACGAATACAAAAAAG CTCACCC AGA GGATGAG ATAATCGAATTGGAT COPRO5265_1481 1308407 - 1309012 + | putative FMN-dependent NADH-azoreductase 2 TERM 978 1309067 - 1309046 - f 80 -10.1 -3.58269 | opp_overlap 1309046 GAAGCGACTTTTAAA GGAGGAGCC TGAT GGCTCTTCC TTTTTTCGTAATAAC TERM 979 1309046 - 1309067 + F 100 -12.3 -5.1861 | opp_overlap 1309046 GAAGCGACTTTTAAA GGAGGAGCC TGAT GGCTCTTCC TTTTTTCGTAATAAC TERM 980 1310144 - 1310159 + G 72 -3.2 -5.06414 | GGAGGCATTGGCCAA TCACGC CTCT GCATGA TTTTTCTTAGAAAAG asnA 1309214 - 1310257 + | aspartate--ammonia ligase COPRO5265_1483 1310299 - 1310820 + | hypothetical integral membrane protein TERM 981 1310881 - 1310869 - g 73 -4.1 -4.86731 | overlap 1310870 TTTCTCTAAAGAAAA CCTGT TCG ACAGA TGGGCAAAAAAATAC smtA 1310849 - 1311511 + | SAM-dependent methyltransferase COPRO5265_1484 1311832 - 1311506 - | hypothetical protein COPRO5265_1486 1312774 - 1311857 - | hypothetical protein COPRO5265_1487 1311849 - 1312043 + | hypothetical protein COPRO5265_1488 1312494 - 1312685 + | hypothetical protein COPRO5265_1489 1314540 - 1312771 - | NADH-ubiquinone/plastoquinone (complex i), various chains domain protein COPRO5265_1490 1314774 - 1315949 + | putative aminotransferase B TERM 982 1315998 - 1315972 - T 100 -21 -5.38326 | GTAAGGAAATAAAAA GGGCTCCTCATC TTT GATGAGGAGCCC TTCCCCTGCATCTCA dsrH 1316339 - 1316052 - | sulfur relay protein TusB/DsrH COPRO5265_1492 1316715 - 1316356 - | hypothetical protein COPRO5265_1493 1317081 - 1316728 - | hypothetical protein COPRO5265_1494 1318082 - 1317084 - | YeeE/YedE family protein COPRO5265_1495 1318359 - 1318129 - | hypothetical protein COPRO5265_1496 1318590 - 1319345 + | hypothetical protein TERM 983 1320183 - 1320165 - g 72 -8.9 -3.64822 | opp_overlap 1320164 ATTCGCTTATCTAAA GATGCCA CTTAT TGGCATC ATGCTTGCCGTACTC COPRO5265_1497 1319491 - 1321125 + | PTS system fructose/mannose-specific IIC component COPRO5265_1498 1321146 - 1321556 + | pts system mannose-specific eiiab component (eiiab-man) COPRO5265_1499 1321582 - 1322076 + | PTS system IIB component TERM 984 1322092 - 1322058 - f 100 -13 -5.1615 | opp_overlap 1322061 1322064, overlap 1322061 GGAAGAGTTAAAAAA GAAGAAGCTGCTGG TCTAGTG CCAGCAGCTTCTTT ACCCACTCCATTTGG TERM 985 1322061 - 1322089 + F 100 -15.4 -3.5594 | opp_overlap 1322058 1322061, overlap 1322064 AGAGTTAAAAAAGAA GAAGCTGCTGGT CTAGT GCCAGCAGCTTC TTTACCCACTCCATT TERM 986 1322089 - 1322061 - f 100 -14.7 -4.65666 | opp_overlap 1322061 1322064, overlap 1322058 AGAGTTAAAAAAGAA GAAGCTGCTGG TCTAGTG CCAGCAGCTTC TTTACCCACTCCATT TERM 987 1322064 - 1322086 + F 100 -11.3 -3.91716 | opp_overlap 1322061 1322058, overlap 1322061 GTTAAAAAAGAAGAA GCTGCTGGT CTAGT GCCAGCAGC TTCTTTACCCACTCC COPRO5265_1500 1322159 - 1322869 + | hypothetical protein nagA2 1322897 - 1324060 + | N-acetylglucosamine-6-phosphate deacetylase COPRO5265_1502 1324044 - 1324916 + | hypothetical protein TERM 988 1325888 - 1325859 - g 93 -9.3 -4.83722 | AAGAGGAGAACAAAA CCTTCGACCTTGG GAAT CAAAGGTTGAAGG CATAGAGAGCTTAAT TERM 989 1326161 - 1326131 - g 83 -10.4 -3.73072 | opp_overlap 1326121 AAGGTGGGTATGAAA CCCTTTCCACCCTG CTG CAGCGTGGAGAAGG AGAAAGGATAGTTGA COPRO5265_1503 1324909 - 1326213 + | hypothetical protein COPRO5265_1504 1326269 - 1327291 + | glucosamine--fructose-6-phosphate aminotransferase-related protein TERM 990 1328183 - 1328167 - g 73 -4.4 -4.77036 | TTTTATGATGAAAAA GGGCAA CGCAT TTACCC AGATTCCCGGTTCTT COPRO5265_1505 1327303 - 1328445 + | oxidoreductase family, NAD-binding Rossmann fold protein COPRO5265_1506 1328463 - 1329116 + | Zn-dependent hydrolases of the metallo-beta-lactamase superfamily COPRO5265_1507 1329457 - 1329275 - | hypothetical protein COPRO5265_1508 1329201 - 1329752 + | hypothetical protein COPRO5265_1509 1329762 - 1330361 + | menaquinone biosynthesis methyltransferase UbiE COPRO5265_1510 1330661 - 1330482 - | hypothetical protein COPRO5265_1511 1330442 - 1330558 + | hypothetical protein TERM 991 1331356 - 1331371 + G 79 -7.6 -4.44974 | opp_overlap 1331356 CGAAACAGTCCCAAA CGGTAT AGGA ATACCG TTTTCTACCATTTCA COPRO5265_1512 1331036 - 1332706 + | 2-oxoacid:ferredoxin oxidoreductase subunit alpha TERM 992 1333421 - 1333431 + G 77 -6.8 -4.37886 | opp_overlap 1333409 1333420 GCAGACAGAAAAGCT TCCC ATC GGGA TTTTCTACCAAGTAG COPRO5265_1513 1332708 - 1333562 + | 2-oxoacid:ferredoxin oxidoreductase subunit beta TERM 993 1333634 - 1333579 - f 100 -12.8 -4.15703 | overlap 1333576 TTGCACAAAGAATAA GGGTTCTTACCTCCTGCAAAAGGA ACGTACAA TCTTTGTAAAGGAGGTAAGAACCC ATATGAATCAGAAGC TERM 994 1334625 - 1334606 - g 73 -10.7 -3.05463 | opp_overlap 1334606 ATCTTCTCTATTGAA CCGGGCA TCTACC TGCCCGG TAAGTTCGGCGTTCG TERM 995 1334606 - 1334625 + G 70 -10.7 -2.53911 | opp_overlap 1334606 ATCTTCTCTATTGAA CCGGGCA TCTACC TGCCCGG TAAGTTCGGCGTTCG pepQ 1333637 - 1334722 + | proline dipeptidase COPRO5265_1515 1334807 - 1336132 + | succinyl-diaminopimelate desuccinylase TERM 996 1336157 - 1336189 + GF 79 -7.6 -4.2803 | opp_overlap 1336144 1336171 CATACCACATTTTGT GGAGCCAGCCAAAG CAACA CTCCTGCTGGCTCC TTTTGCATTACAATA COPRO5265_1516 1336155 - 1336277 + | hypothetical protein COPRO5265_1518 1336192 - 1336860 + | hypothetical protein COPRO5265_1517 1337716 - 1336847 - | hypothetical protein COPRO5265_1519 1339235 - 1339074 - | hypothetical protein COPRO5265_1520 1337796 - 1339193 + | hypothetical protein rimI2 1339963 - 1339367 - | acetyltransferase TERM 997 1339914 - 1339895 - G 71 -3.5 -4.8543 | overlap 1339897 1339909 CAACTTTGAGAAAAA TGGAGCT GCAAGT AGCACCA GCTCAGAGAAATGGT radC 1340081 - 1340788 + | DNA repair protein COPRO5265_1523 1340861 - 1341085 + | hypothetical protein TERM 998 1341191 - 1341164 - g 73 -10.6 -2.96787 | overlap 1341163 AACTAAAAGGTAAAC CCATTGGAGTCA TGGC TGACCCCTATGG CAGAGGGAAAAAACG TERM 999 1341770 - 1341752 - g 73 -2.5 -5.19212 | gap 1, opp_overlap 1341766 AGTACTACCAAAAAA TCGCTCAA GGCA TTGA-CGA AACGCCTCTTATTAC COPRO5265_1524 1341082 - 1342254 + | DNA-directed DNA polymerase COPRO5265_1525 1342495 - 1342917 + | hypothetical protein TERM 1000 1343037 - 1343018 - g 82 -7.9 -4.56597 | TTCCGCCGTGAAAAA CGTTCTG AGGCAA CAGAACG TACAATCCCAACCGA TERM 1001 1343925 - 1343939 + G 70 -10 -3.10946 | overlap 1343924 ATCCAGTACCCGCAT GGACTG GAG CAGTCC TAATTTTCGCATGTT hmsR 1342907 - 1344172 + | haemin storage system, HmsR protein COPRO5265_1528 1344560 - 1346557 + | methyl-accepting chemotaxis protein (MCP) signaling domain COPRO5265_1527 1346623 - 1346522 - | hypothetical protein TERM 1002 1346584 - 1346608 + g 100 -12.2 -5.22312 | opp_overlap 1346584 1346587 GCAATTGCATGCAAA GAAGGGGCAG CATTT CTGCTCCTTC TTTTTTGCTGTCCAT TERM 1003 1346608 - 1346584 - G 79 -10 -3.66874 | opp_overlap 1346584, overlap 1346587 GCAATTGCATGCAAA GAAGGGGCAG CATTT CTGCTCCTTC TTTTTTGCTGTCCAT COPRO5265_1529 1346688 - 1347428 + | hypothetical protein dur 1347432 - 1348484 + | allophanate hydrolase subunit 2 TERM 1004 1348926 - 1348914 - g 74 -3.3 -5.055 | CGAAGCTGTAAAAAA GACAG TAC CTGAC GCCATCTTGCTTGCT COPRO5265_1531 1348507 - 1349292 + | LamB/YcsF family protein TERM 1005 1349693 - 1349703 + G 74 -5.4 -4.56597 | CTGGGAAGGTCCTGA CAGT GTT ACTG TTTTTACCAGAGAAG COPRO5265_1532 1349445 - 1350542 + | hypothetical protein COPRO5265_1533 1350827 - 1350732 - | hypothetical protein COPRO5265_1534 1350854 - 1350946 + | hypothetical protein COPRO5265_1535 1351015 - 1351992 + | cell envelope-related transcriptional attenuator domain family TERM 1006 1352187 - 1352137 - T 93 -10 -4.26903 | opp_overlap 1352140, overlap 1352140 TGCAGGTTATGAAAA CACGAGAATAGGTCCGAT-GAGCG ATGGA CTCTCCACCGAACCTATTCTC-TG TTACCCTTGGTTTAC TERM 1007 1352185 - 1352140 - T 91 -12.8 -2.83772 | gap 1, opp_overlap 1352140, overlap 1352137 AGGTTATGAAAACAC GAGAATAGGTCCGAT-GAGCG ATGGA CTCTCCACCGAACCTATTCTC TGTTACCCTTGGTTT COPRO5265_1536 1352782 - 1352357 - | hypothetical protein TERM 1008 1353467 - 1353453 - g 76 -4.2 -5.09173 | overlap 1353454 GAAGATCTTAAAAAA GCTGAC TGG GTCAGT GTGAAAATTGATGCC COPRO5265_1537 1353084 - 1354022 + | radical SAM domain protein COPRO5265_1538 1354029 - 1355048 + | hydrogenase expression/formation protein HypE COPRO5265_1539 1355264 - 1355974 + | hypothetical protein COPRO5265_1540 1355992 - 1357137 + | hypothetical protein TERM 1009 1357143 - 1357189 + F 91 -5.2 -5.70522 | gap 1, overlap 1357149 1357150 TCAATCATAACAAGG TTCTTAA-GGGGGCTGGCAAC CCATGC GTTGTCAGCCCCCGTTTCTAA TTTTTTGTTGTTATT TERM 1010 1357149 - 1357182 + F 100 -14.6 -4.33146 | overlap 1357143 1357150 ATAACAAGGTTCTTA AGGGGGCTGGCAAC CCATGC GTTGTCAGCCCCCG TTTCTAATTTTTTGT TERM 1011 1357150 - 1357181 + F 100 -18.1 -3.17447 | overlap 1357149 1357143 TAACAAGGTTCTTAA GGGGGCTGGCAAC CCATGC GTTGTCAGCCCCC GTTTCTAATTTTTTG TERM 1012 1357513 - 1357503 - g 72 -8.2 -3.75292 | AGCCATGACTAACAA CGCC GTA GGCG AAAAAGAAAGAAACG COPRO5265_1541 1357462 - 1357677 + | hypothetical protein COPRO5265_1542 1357698 - 1358831 + | hypothetical protein COPRO5265_1543 1359885 - 1359325 - | hypothetical protein COPRO5265_1544 1360080 - 1359940 - | hypothetical protein TERM 1013 1360195 - 1360166 - R 100 -17.3 -5.24129 | opp_overlap 1360163 1360185 GTTTCGTACAAAAAA GCTCGGCAAAGAA TGAA TTCTCTGCCGAGC CGGGTTATAAACAAT pdaA 1360940 - 1360221 - | delta-lactam-biosynthetic de-N-acetylase COPRO5265_1546 1361281 - 1362204 + | peptide methionine sulfoxide reductase MsrB/msrA TERM 1014 1362249 - 1362210 - f 100 -12.3 -4.71426 | gap 1, opp_overlap 1362238 1362239 1362242 TTTGGATTAACAAAA CTCCGACCTTCCTGAACT TTCAC AGTT-AGGAGGGCCGGAG TGCCCCGTCCTCATC COPRO5265_1547 1362362 - 1363708 + | tyrosine phenol-lyase (Beta-tyrosinase) TERM 1015 1363723 - 1363751 + G 100 -8.2 -5.14163 | gap 2, opp_overlap 1363740 AACACATCTCCTAGT GGGGCGTAAGCACA CCA TG-GC-TGCGCCCC TTTTTGTTAATGCCT COPRO5265_1548 1363721 - 1363837 + | hypothetical protein TERM 1016 1364646 - 1364629 - g 76 -2 -5.39755 | opp_overlap 1364620, overlap 1364620 CACAAGCAGAAAAAA CAACAA TTGTAT TTGCTG TTGGTGGCGCATCAA COPRO5265_1549 1364523 - 1365842 + | trehalose/maltose binding protein COPRO5265_1550 1365867 - 1366775 + | trehalose/maltose transport inner membrane protein COPRO5265_1551 1366766 - 1367515 + | trehalose/maltose transport inner membrane protein TERM 1017 1367506 - 1367545 + T 95 -9.4 -4.43189 | opp_overlap 1367510, overlap 1367508 1367510 TACGGCAGGAGCATT AAAAGATTGAGCGAGC CGTTAATA GCTCGCTCAATCTCTC TTTTATAGCATTACT TERM 1018 1367508 - 1367543 + T 100 -12 -3.81948 | opp_overlap 1367510, overlap 1367506 1367510 CGGCAGGAGCATTAA AAGATTGAGCGAGC CGTTAATA GCTCGCTCAATCTC TCTTTTATAGCATTA TERM 1019 1367510 - 1367541 + T 100 -14.6 -3.48517 | opp_overlap 1367510, overlap 1367508 1367506 GCAGGAGCATTAAAA GATTGAGCGAGC CGTTAATA GCTCGCTCAATC TCTCTTTTATAGCAT TERM 1020 1367541 - 1367510 - T 100 -15.3 -4.32034 | opp_overlap 1367510 1367508 1367506 GCAGGAGCATTAAAA GATTGAGCGAGCC GTTAAT AGCTCGCTCAATC TCTCTTTTATAGCAT COPRO5265_1552 1368771 - 1367548 - | trehalose phosphorylase, putative COPRO5265_1553 1369411 - 1368758 - | hypothetical protein TERM 1021 1369668 - 1369654 - H 71 -8.6 -3.40775 | overlap 1369652 ATCGGTACTTAAAGA GCAAAG TCC CTTTGC TAACTGCAATTCAAG COPRO5265_1554 1369734 - 1370609 + | hypothetical protein COPRO5265_1555 1372504 - 1370927 - | ABC transporter, ATP-binding protein TERM 1022 1371620 - 1371609 - G 71 -7.2 -4.07687 | opp_overlap 1371608 ATGCTTTCTTCAAAA GCCG GCAG CGGC GTCATGTTCTCTTTC COPRO5265_1556 1372755 - 1372495 - | hypothetical protein COPRO5265_1557 1373166 - 1372840 - | protein CsaA COPRO5265_1558 1373742 - 1373200 - | hypothetical protein COPRO5265_1559 1375234 - 1373786 - | hypothetical protein TERM 1023 1374606 - 1374622 + g 78 -6.6 -4.7254 | opp_overlap 1374605 1374606 ACGAAGACGAGCAAT CTGCTA AGGAA TAGCAG TTTTTGCTGGGCACT COPRO5265_1560 1377543 - 1375234 - | hypothetical protein COPRO5265_1561 1381804 - 1377545 - | hypothetical protein TERM 1024 1378438 - 1378473 + g 78 -4.8 -5.00616 | CATTGTAAAAATACT TAAACAGCCAGATAGG ATAA CCTACTTCGTTGTTTA TTTTTTGGCGGACCG TERM 1025 1379045 - 1379035 - G 80 -5.4 -4.98531 | overlap 1379036 1379037 CTTGTAAATCAAAAA GCTT GGT AAGC AAACTTACTAAAGAG TERM 1026 1379872 - 1379860 - G 72 -2.6 -4.9218 | GAGCTACCACAAAAA CCAC GCTAT GCGG ATTAGATTCTTGCGG TERM 1027 1381256 - 1381267 + g 71 -7.2 -4.13654 | GTTACCCACCATGGC CCGC AACT GCGG TTTCTCATTTAGGAA TERM 1028 1381690 - 1381680 - G 72 -3.2 -5.03747 | AAAGCCTCCAAAAAA CTAC TTA GCAG GTCAATAAAAGAATC COPRO5265_1562 1382604 - 1381807 - | hypothetical protein COPRO5265_1563 1384972 - 1382591 - | phosphoadenosine phosphosulfate reductase family protein TERM 1029 1384663 - 1384681 + g 76 -8.2 -4.09685 | overlap 1384664 ACTGCTCTTTGTTCT TTTCAAGC ATA GCTTGAAG TTTTACCGGCTCAAG TERM 1030 1384664 - 1384680 + g 70 -9.5 -3.05597 | overlap 1384663 CTGCTCTTTGTTCTT TTCAAGC ATA GCTTGAA GTTTTACCGGCTCAA COPRO5265_1564 1385111 - 1384959 - | hypothetical protein TERM 1031 1385814 - 1385800 - g 77 -3.4 -5.13527 | overlap 1385802 AAGGAAGAAATAAAA CGGCGC ATG GCACAG CTTGACAAGAGCGAT TERM 1032 1387434 - 1387446 + G 72 -4.8 -4.60041 | opp_overlap 1387425 1387416 1387415, overlap 1387415 1387415 TAGGAAGCTGGGACA GCTC GTAAG GAGC TTTTTCAACATGGGT COPRO5265_1565 1385179 - 1387638 + | pyruvate-formate lyase COPRO5265_1566 1387662 - 1388582 + | putative pyruvate formate-lyase 3-activating enzyme (PFL-activating enzyme 3) (Formate-C-acetyltransferase-activatingenzyme 3) TERM 1033 1388602 - 1388590 - Tf 76 -2.7 -5.27335 | GCGGGTAAATAAAAA TCTTG GCG CAAAA CCAGCCTAACTGTTT COPRO5265_1567 1389646 - 1388621 - | hypothetical protein COPRO5265_1568 1388661 - 1388942 + | hypothetical protein COPRO5265_1570 1390163 - 1391254 + | iron ABC transporter substrate-binding protein, putative TERM 1034 1391251 - 1391232 - T 82 -5 -5.28176 | TTGATGCAGAAAAAA TGGGAG TGTTCTTG CTCCCA TGACAACTAAGCTGC COPRO5265_1571 1392467 - 1391379 - | putative oxidoreductase YcjS TERM 1035 1392419 - 1392394 - G 77 -3.3 -5.24531 | gap 1, overlap 1392395 1392412 ATCTGTGACAAAAAA GGCAT-GTGCTT TGC AAACGCGATGCC GCCGCAACCTATGAT COPRO5265_1572 1392707 - 1394359 + | ABC transporter, ATP-binding protein TERM 1036 1394486 - 1394500 + T 77 -5 -4.97957 | overlap 1394487 TCAACTCAGTTCTGG TCAAAG TAG CTTTGG TTTTATTCTTATATG TERM 1037 1395211 - 1395192 - T 72 -6.5 -4.37527 | opp_overlap 1395192 1395195 TGACAACTAGCAAAA GAAGATG CCACTC CATCTTC TTATCGAAATAAACA COPRO5265_1573 1395639 - 1395544 - | hypothetical protein TERM 1038 1396263 - 1396226 - R 100 -16.5 -4.11773 | gap 1, opp_overlap 1396233, overlap 1396216 1396230 1396233 AAACATTTCCTAAAA CCAATAACGGCAAGGGAG AGT CTCCCTTGCCGTTAT-GC CGTCTTGCGTAGTTA TERM 1039 1396260 - 1396230 - R 100 -22.8 -3.67175 | opp_overlap 1396233, overlap 1396226 1396216 1396233 ATTTCCTAAAACCAA TAACGGCAAGGGAG AGT CTCCCTTGCCGTTA TGCCGTCTTGCGTAG TERM 1040 1396233 - 1396257 + r 100 -20.1 -3.3676 | opp_overlap 1396230 1396226 1396216 1396233 TCCTAAAACCAATAA CGGCAAGGGAG AGT CTCCCTTGCCG TTATGCCGTCTTGCG TERM 1041 1396257 - 1396233 - R 100 -20.1 -3.965 | opp_overlap 1396233, overlap 1396230 1396226 1396216 TCCTAAAACCAATAA CGGCAAGGGAG AGT CTCCCTTGCCG TTATGCCGTCTTGCG COPRO5265_1574 1397538 - 1396276 - | hypothetical protein COPRO5265_1575 1398181 - 1397513 - | hypothetical protein COPRO5265_1576 1398408 - 1398316 - | hypothetical protein TERM 1042 1398567 - 1398551 - H 83 -10.9 -3.53012 | opp_overlap 1398551 TCTGCCCTTGCTAAA TCCCTGA GTT TCAGGGA TTATACTCACGTCAC TERM 1043 1398551 - 1398567 + H 83 -10.9 -3.41602 | opp_overlap 1398551 TCTGCCCTTGCTAAA TCCCTGA GTT TCAGGGA TTATACTCACGTCAC TERM 1044 1399482 - 1399471 - H 70 -5.8 -4.30576 | TCTTGACCAGCAAAA GCGT AATG ACGC AGGGCAAACCGCCTC COPRO5265_1577 1399894 - 1400619 + | hypothetical protein COPRO5265_1578 1401601 - 1401909 + | ribbon-helix-helix protein, CopG family COPRO5265_1579 1401893 - 1402351 + | hypothetical protein COPRO5265_1580 1404382 - 1402772 - | hypothetical protein COPRO5265_1581 1405097 - 1404369 - | ABC-type transporter ATP-binding protein EcsA TERM 1045 1405238 - 1405210 - R 84 -3.8 -5.5112 | opp_overlap 1405211 1405234, overlap 1405211 1405234 TTCAGTAACAAAAAA GGCTCCACACTT AGAAA AAATGAGGAGCA TTTTTATGCACTTTA TERM 1046 1405237 - 1405211 - R 70 -7.3 -3.89587 | opp_overlap 1405211 1405234, overlap 1405210 1405234 TCAGTAACAAAAAAG GCTCCACACTT AGAAA AAATGAGGAGC ATTTTTATGCACTTT fabG3 1406025 - 1405264 - | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 1047 1405379 - 1405391 + g 71 -3.3 -4.77775 | overlap 1405376 GGTTCACCCCATCGT CCAAG CGG CGTGG TTTGTTTTATCAACT TERM 1048 1405424 - 1405405 - G 81 -12.2 -3.14132 | opp_overlap 1405396 GGTTTGTTTTATCAA CTGATCCG TTTG CGGATCAG ACATAAGATCTCTGG aprE 1406813 - 1408135 + | extracellular alkaline serine protease TERM 1049 1408161 - 1408181 + T 91 -6.8 -5.45802 | opp_overlap 1408161, overlap 1408163 CCATTAAAACAAAAA GACCCTCT GAAAA AGAGGGCC TTTTTGTTTTACAAC TERM 1050 1408181 - 1408161 - T 100 -9 -5.50723 | opp_overlap 1408161 1408163 CCATTAAAACAAAAA GACCCTCT GAAAA AGAGGGCC TTTTTGTTTTACAAC TERM 1051 1408691 - 1408641 - T 74 -9.3 -3.40403 | gap 2, opp_overlap 1408685 1408690, overlap 1408642 1408687 GCGTTGCCAGGAGAA CCT-CTCGTTGAGTCATCAG-GA AAGCTAG CCTCTGATGACTCAACGAGCATG ATGCCCTGTTCCCAT TERM 1052 1408689 - 1408642 - T 76 -10.8 -2.64099 | gap 1, opp_overlap 1408685, overlap 1408641 1408687 CGTTGCCAGGAGAAC CTCTCGTTGAGTCATCAG-GA AAGCTAG CCTCTGATGACTCAACGAGCA TGATGCCCTGTTCCC COPRO5265_1584 1409608 - 1408778 - | transcriptional regulator COPRO5265_1585 1410855 - 1409623 - | transcriptional regulator COPRO5265_1586 1411080 - 1412642 + | chloride channel protein COPRO5265_1587 1413013 - 1413399 + | 4Fe-4S binding domain protein TERM 1053 1414525 - 1414502 - gf 74 -4.5 -4.8543 | GAAGCCTTACAAAAA GGGCTGATC AGCATG GACCAGACC ATAGCGCCCTTGGAA COPRO5265_1588 1413404 - 1415164 + | aldehyde ferredoxin oxidoreductase COPRO5265_1589 1415139 - 1415363 + | molybdopterin converting factor, subunit 1 dsdA 1416603 - 1415365 - | D-serine ammonia-lyase COPRO5265_1591 1417531 - 1416611 - | putative sugar kinase TERM 1054 1416653 - 1416668 + gH 73 -9 -3.54638 | opp_overlap 1416633 AGCAACCCACCTGCT GGCTTC CGCT GAAGCC TTTCGGCAAGCTTCT TERM 1055 1417624 - 1417602 - gH 70 -4.8 -4.48221 | overlap 1417605 1417607 GAGCAAGTCATAAAA GAAGCTGG GGCTGTG CCAGCTAC CATAGGTGTCATAAA COPRO5265_1592 1417461 - 1418369 + | indigoidine synthase A like protein COPRO5265_1593 1418396 - 1418704 + | hypothetical protein TERM 1056 1418731 - 1418720 - T 73 -5.8 -4.52502 | opp_overlap 1418720 GGTAAAAAGAAATAA CGGA GGCG TCCG TGTTAGAAAGGGGCT TERM 1057 1418741 - 1418767 + T 100 -18.1 -4.43879 | opp_overlap 1418741 CGTCCGTGTTAGAAA GGGGCTTACCC ATTAC GGGTAAGCCCC TTTTGCTTAAGTCAT TERM 1058 1418767 - 1418741 - T 100 -18.8 -3.85698 | opp_overlap 1418741 CGTCCGTGTTAGAAA GGGGCTTACCCA TTA CGGGTAAGCCCC TTTTGCTTAAGTCAT COPRO5265_1594 1419773 - 1418817 - | surface layer protein TERM 1059 1419470 - 1419487 + g 73 -4.1 -4.84262 | overlap 1419472 1419479 TGAATCTAATCAGCG TGTTCCC AGTG GGGAATG TTTTCTTCATTATTG TERM 1060 1420118 - 1420105 - g 71 -3.8 -4.84017 | opp_overlap 1420105 AAGTGGTTACAAAAA CAGG CATTGT CCTG CTTTCGGAGAAACAA COPRO5265_1595 1419876 - 1420760 + | oxidoreductase YdhF TERM 1061 1422087 - 1422067 - g 77 -9 -3.86524 | ACATGTTTCCACAAA CCACACAC GTTGA GTGCGTGG CACTACTGATAAAAG rumA 1420797 - 1422113 + | 23S rRNA (uracil-5-)-methyltransferase RumA COPRO5265_1597 1422935 - 1423615 + | ERF family protein COPRO5265_1598 1424735 - 1423686 - | oxidoreductase, 2-nitropropane dioxygenase family TERM 1062 1423751 - 1423767 + g 87 -9.5 -4.36914 | opp_overlap 1423749 CCACATGAACAATTT TGTCTAC TCT GTAGACA TTTTCTCCACAGAAA