TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.56624 %AT, 1528533 nt, 12117 terms. Intergenic: 0.597496 %AT, H2T: 291148 nt, 2125 terms; T2T: 132550 nt, 1996 terms; H2H: 136995 nt, 1860 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|77358712|ref|NC_002971.3| Coxiella burnetii RSA 493, complete genome (length 1995281) CBU_2095a 119 - 6 - | hypothetical protein TERM 1 435 - 412 - g 73 -4.6 -4.87893 | AATGCCAACCAAAAA TTCCCATGAG CCCT CTCATCGAAA AGCAGCGGCTCCCCC TERM 2 453 - 437 - g 76 -7.9 -4.18018 | CCCTCTCATCGAAAA GCAGCGG CTC CCCCTGC CGGTACCACGATTTC TERM 3 1302 - 1282 - g 71 -9.7 -3.10164 | overlap 1286 CGACCTATTAGCTAA GCGACGCAA CCG TTCCGTCGC GCGCCCCCGTCAAAT dnaA 140 - 1495 + | chromosomal replication initiator protein TERM 4 1559 - 1513 - f 77 -6.5 -4.60255 | gap 1, overlap 1514 AGAAGTTTTTAAAAA CCCCTCTCCTA-GCCTCTCCCG CAAG CGGGAGAGGAATAGTGGAAGGT GGCGCTGAGGATTTT TERM 5 1558 - 1514 - f 77 -10 -3.3543 | gap 1, overlap 1513 GAAGTTTTTAAAAAC CCCTCTCCTA-GCCTCTCCCG CAAG CGGGAGAGGAATAGTGGAAGG TGGCGCTGAGGATTT dnaN 1639 - 2748 + | DNA polymerase III, beta chain recF 2753 - 3826 + | DNA replication and repair protein RecF TERM 6 4049 - 4039 - f 93 -5.4 -5.63504 | AATCCGATAAAAAAA TCCT CAC AGGA GTTCCAATCTATGGT TERM 7 4102 - 4085 - f 79 -3.5 -5.44119 | gap 1 TCCACCCTAAAAAAA TCACT-TG GAA CACAGTGA TCCCTGACCTTAGTA TERM 8 4916 - 4932 + G 87 -5.1 -5.37593 | opp_overlap 4916, overlap 4923 CATGCAGTGGAACGA TGGATTC CAA GAAACCA TTTTTTGCTTTACGA TERM 9 6300 - 6276 - g 78 -8.6 -4.05446 | gap 1 GTGCGCAACGACAAA CGCCGAA-CGG TTAC CCATTTCGGCG AAGCCCTCGAATGGT TERM 10 6407 - 6421 + G 70 -5.6 -4.33417 | opp_overlap 6398, overlap 6409 GGAAACCACGATGGA CCGCGA AAG TCGCCG TTTATTATCGGTGAG TERM 11 6483 - 6507 + G 76 -4.1 -5.06414 | opp_overlap 6492 TTTACCACCCTAATG GGCGACCAAGT CGA ACCTCGCCGCC TTTTTATTGAACAAA gyrB 4122 - 6554 + | DNA gyrase subunit B TERM 12 7679 - 7665 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 13 7741 - 7721 - g 71 -2.4 -5.10461 | opp_overlap 7722, overlap 7722 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_0006 6684 - 7778 + | IS1111A transposase CBU_0006a 8047 - 7775 - | hypothetical protein TERM 14 8110 - 8063 - R 83 -11.7 -3.10343 | gap 2, opp_overlap 8063, overlap 8069 8079 ATACGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATTGTCCCCGTATTTCGC TTCGCTCATACGGGC CBU_0007 8398 - 8186 - | hypothetical protein TERM 15 8345 - 8360 + g 100 -4.7 -5.91981 | CACTTGTTTTTTTAA CCCTT TCGCAT AAGGG TTTTTTTTCGCTTTT CBU_0007a 8688 - 8395 - | hypothetical cytosolic protein TERM 16 8691 - 8712 + H 73 -7.5 -4.07562 | GTATATCCCTCATGC TTACATTAT AATT ATAATGTAA TTTATGTCAAATTTC CBU_0008 8716 - 8904 + | hypothetical protein CBU_0008a 9006 - 9560 + | hypothetical protein TERM 17 9674 - 9690 + G 70 -3 -4.89477 | opp_overlap 9675, overlap 9669 9675 CTGCGGTCCATTAAA TCCAAA GCTAA TTTGGG TTTTATTGTTAGCGA TERM 18 10060 - 10079 + G 71 -7.8 -3.78934 | TTTAAGTTATGGTTA TGCCGCTC CGGT GAGCGCCA TTATTATCAACCGCA TERM 19 10789 - 10757 - g 71 -8.4 -3.53811 | opp_overlap 10759, overlap 10759 CCTATTGGCGGCAAA GATGGAACGCTTGC CGGAC GCATGCGCTCCATT GCTAATTCCGAACGA TERM 20 10787 - 10759 - g 80 -11 -3.34715 | opp_overlap 10759, overlap 10757 TATTGGCGGCAAAGA TGGAACGCTTGC CGGAC GCATGCGCTCCA TTGCTAATTCCGAAC dacB 9560 - 10993 + | D-alanyl-meso-diaminopimelate endopeptidase aroE 10986 - 11804 + | shikimate 5-dehydrogenase TERM 21 11904 - 11928 + G 83 -7.4 -4.79683 | opp_overlap 11904, overlap 11918 TTGAATGAATAAGTA TTTTTCTTTT CTCAC AAAAGAAAAA TTTCTTTTATACGTT CBU_0011 11893 - 11997 + | hypothetical protein TERM 22 12113 - 12135 + T 100 -13.5 -6.22691 | opp_overlap 12111 12110, overlap 12104 12107 AGGGATCACCAACCC GGGGTGGTT ATAGC AACCACCCC TTTTTTTTATTATTA TERM 23 12539 - 12553 + T 82 -4.2 -5.4505 | overlap 12540 GGCCTAACTAATTGC CGGAAG CGT CTTCCA TTTTTTCTTGGACAG TERM 24 12540 - 12552 + T 73 -7.7 -3.86307 | overlap 12539 GCCTAACTAATTGCC GGAAG CGT CTTCC ATTTTTTCTTGGACA CBU_0014 14479 - 13226 - | low-affinity inorganic phosphate transporter CBU_0015 14556 - 15272 + | hypothetical protein xapA 15274 - 16095 + | purine nucleoside phosphorylase TERM 25 16783 - 16799 + G 81 -12.3 -2.6006 | overlap 16782 TACGCTTCGGGGCCA GTCGGCT GTT AGCCGAC ATTATGCAGTGCCTT deoC 16092 - 16817 + | deoxyribose-phosphate aldolase TERM 26 17208 - 17191 - g 74 -4.1 -5.00616 | opp_overlap 17173 TTTTTTCTTAAAAAA GAGTATC ATTA GAAACTC TATAAATGATGAAAT CBU_0018 16901 - 17344 + | hypothetical cytosolic protein TERM 27 17476 - 17462 - T 80 -11.4 -2.84634 | CTGCATATCATTACA GCGCAC GGC GTGCGC TGCGCGCTAAAAGCG TERM 28 17477 - 17495 + T 89 -10.2 -4.16016 | overlap 17478 GCGCACGGCGTGCGC TGCGCGCT AAA AGCGCGCC TTTATTCCCGCCTGC TERM 29 17478 - 17494 + T 93 -13.7 -3.09288 | overlap 17477 CGCACGGCGTGCGCT GCGCGCT AAA AGCGCGC CTTTATTCCCGCCTG CBU_0019 17567 - 17457 - | hypothetical protein CBU_0020 18126 - 17575 - | ribosomal subunit interface protein domain/'cold-shock' DNA-binding domain protein TERM 30 17758 - 17741 - G 70 -5.7 -4.42851 | GCAATAAACCCAAAA TCTTTTT CTTT AAAAAGA CGAACAATTTCACCC TERM 31 18399 - 18409 + G 100 -5.4 -5.65496 | opp_overlap 18399 AAACCAACCTTTAAA CAAG CTA CTTG TTTTTCTTTTTAATC TERM 32 18578 - 18566 - g 82 -9.1 -4.22283 | overlap 18561 CAAAAAAAGAGGAAA GCGCT CAG AGCGC TCCAATTAATGGTTT TERM 33 18700 - 18688 - g 83 -2.7 -5.48054 | ATTAAAATTAAAAAA TCAAA GGG CTTGA CCTGGCACGATTGTC TERM 34 18945 - 18922 - g 81 -2.3 -5.47821 | overlap 18924 AGGGAGTTAAAAAAA CTTTGCGGC TCGCTC GCCTCAATG GAAAAATGCCAACAG TERM 35 19451 - 19437 - g 76 -4.2 -5.16151 | opp_overlap 19437 CAAATTTAAGAAAAA TACCGC TCT GCGCTA TTTTGGAAGGCTATA TERM 36 20528 - 20512 - g 82 -5.1 -5.28176 | TTTATCGAGAAAAAA GACAAAC CTC GTTCGCC CTATGAGGTAACGCA CBU_0021 18337 - 20766 + | hypothetical protein CBU_0022 21004 - 21813 + | hypothetical cytosolic protein CBU_0023 22331 - 21819 - | hypothetical cytosolic protein csrA-1 22665 - 22459 - | carbon storage regulator CBU_0025 22883 - 22761 - | hypothetical protein rpiA 23692 - 23030 - | ribose-5-phosphate isomerase A TERM 37 23761 - 23787 + r 70 -9.5 -2.5366 | gap 1, overlap 23760 23759 TTCAATTTTAGACTT CGTCATTCCTCG CAGG CGGGGA-TGACG GCTTTAATTTTTTAG CBU_0027 24724 - 23834 - | acyltransferase family protein CBU_0029 27103 - 26405 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 38 26611 - 26622 + g 76 -3 -5.1848 | GGACCATTCGAGCCC CTTT AGGG AAAG TTTTTTCAGTTCCTT CBU_0030 28277 - 27090 - | hydroxymethylglutaryl-coenzyme A reductase TERM 39 27727 - 27711 - G 70 -6.6 -4.15044 | GGTGCCTCGAATAAA CTCACA TGCAT TGTGAG TACAAAAGGTAGTCA CBU_0031 29314 - 28376 - | short chain dehydrogenase/reductase family oxidoreductase TERM 40 29680 - 29658 - g 73 -9.2 -3.56568 | overlap 29664 AGACTAAAATACTAA GAAAAACGCC GTT AGCGTTCTTC AAGCCCCTCTTAGCC TERM 41 29674 - 29664 - g 80 -4.6 -5.20606 | overlap 29658 AAATACTAAGAAAAA CGCC GTT AGCG TTCTTCAAGCCCCTC CBU_0032 29546 - 29824 + | hypothetical cytosolic protein CBU_0033 30618 - 29917 - | 4'-phosphopantetheinyl transferase family CBU_0034 30882 - 30622 - | putative acyl carrier protein CBU_0035 32179 - 30905 - | beta-ketoacyl-acyl-carrier-protein-synthase family protein TERM 42 30966 - 30945 - G 84 -13.1 -2.6574 | opp_overlap 30950, overlap 30950 CAAGCATTGACATCA CCAAAGCCA AAGC TGGCTTTGG CTAAAACGTCGATTT TERM 43 30967 - 30950 - G 79 -9.9 -3.82218 | opp_overlap 30950, overlap 30945 ATTGACATCACCAAA GCCAAAG CTGG CTTTGGC TAAAACGTCGATTTG TERM 44 31619 - 31605 - G 79 -7.8 -4.36914 | opp_overlap 31605 CCGCCCGCGAGAAAA CGGCAA GCC CTGCCG TTTTTCAAGGCATAA TERM 45 31605 - 31619 + g 80 -7.1 -4.57569 | opp_overlap 31605 CCGCCCGCGAGAAAA CGGCA AGCCC TGCCG TTTTTCAAGGCATAA CBU_0036 32655 - 32176 - | putative beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabA 33276 - 32659 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 46 33219 - 33242 + gH 74 -2.4 -5.27023 | overlap 33227 33228 33233 CCCACGTTAATGCAA CCATTTCTTC TTTG GAAAAGGTGG TTTTCTTTTTGAAAT CBU_0037a 33230 - 33415 + | hypothetical protein CBU_0038 34457 - 33474 - | putative 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 47 33588 - 33578 - G 82 -6.8 -5.00884 | opp_overlap 33577 ATCGTTGGGAAAAAA CGCT GGG AGCG CTTGCTGCACCGCAA TERM 48 34482 - 34537 + r 86 -11.8 -3.37732 | opp_overlap 34482 34484, overlap 34534 GTTTCATTATGAAAA TACCCTCTCCTCTGACTCCTTTCCCG CAAG CGGGAGAGGAGGTGGGGAAAAGGGGA TTATACAATTCCTCT TERM 49 34537 - 34482 - R 76 -7.4 -4.30576 | opp_overlap 34482 34534, overlap 34484 GTTTCATTATGAAAA TACCCTCTCCTCTGACTCCTTTCCCG CAAG CGGGAGAGGAGGTGGGGAAAAGGGGA TTATACAATTCCTCT TERM 50 34535 - 34484 - R 80 -10 -3.7574 | opp_overlap 34482 34534, overlap 34482 TTCATTATGAAAATA CCCTCTCCTCTGACTCCTTTCCCG CAAG CGGGAGAGGAGGTGGGGAAAAGGG GATTATACAATTCCT prlC 36571 - 34538 - | oligopeptidase A TERM 51 35438 - 35422 - G 71 -8.7 -3.53012 | CGTCCGGGTGCCAAA CGTCAGC GGG ACTGACG GGCTTAATGGTTATT TERM 52 37615 - 37601 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 53 37677 - 37657 - g 71 -2.4 -5.10461 | opp_overlap 37658, overlap 37658 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_0040 36620 - 37714 + | IS1111A transposase CBU_0040a 37983 - 37711 - | hypothetical protein TERM 54 38040 - 37995 - R 100 -18.5 -3.96531 | opp_overlap 37995 38000 38023 CCATATACGTATAAA GCGAAGCGGAATACGGGAA TTATTATT TCCCCGTATTGCGCTTCGC TTCATACGGGCTACT TERM 55 37995 - 38040 + r 100 -17.1 -3.1505 | gap 1, opp_overlap 37995, overlap 38000 38023 CCATATACGTATAAA GCGAAGCGGAATACGGG-AATT ATT ATTTCCCCGTATTGCGCTTCGC TTCATACGGGCTACT CBU_0041 40220 - 38088 - | hypothetical protein TERM 56 38505 - 38491 - G 71 -4.2 -4.74103 | overlap 38492 GTTTGAATGGAAAAA CTGGCA TCA TGCCAT GCGTCGCGTAAATAA TERM 57 38668 - 38679 + g 71 -4.4 -4.68103 | CAAAGATTTTTCTTT GCTT GCGA AAGC TTTTCTTCACATTCC hemH 41383 - 40319 - | ferrochelatase TERM 58 41130 - 41117 - G 72 -8.1 -3.93401 | GCTATAAACTAATAA CGGAG AACC CTCCG GCATCCAAATTTTTT CBU_0043 41407 - 42009 + | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family TERM 59 42026 - 42015 - f 73 -7.2 -4.12532 | opp_overlap 42015 42015 TTTGGTATAGAGAAA CCCC TCCC GGGG GTTAATCAATACCTG CBU_0044 42116 - 42871 + | hypothetical protein TERM 60 42938 - 42959 + T 100 -12.3 -4.68424 | opp_overlap 42938 ATCAGTTTAAAGAAA TCTCGGTCG CTTG CGGCCGAGA TTTTTAACTCAATTC TERM 61 42959 - 42938 - T 90 -10.1 -4.44448 | opp_overlap 42938 ATCAGTTTAAAGAAA TCTCGGTCG CTTG CGGCCGAGA TTTTTAACTCAATTC CBU_0045 43528 - 42968 - | putative lipoprotein CBU_0048 46627 - 45629 - | auxiliary transport protein, membrane fusion protein family CBU_0049 47973 - 46663 - | hypothetical protein CBU_0050 48768 - 48166 - | hypothetical cytosolic protein CBU_0051 49377 - 48793 - | hypothetical protein TERM 62 49116 - 49097 - G 74 -3.6 -5.03145 | opp_overlap 49097 TAATTTTCTAAAAAA TTTTCCAA ATGA TTGGCAAA GTTTCTAACACCTGA enhA.1 49486 - 50235 + | enhanced entry protein TERM 63 50274 - 50317 + F 74 -4.6 -5.00616 | CTAAGTAACTTGACT GTCGTTTCTACATCTTCTAC TGTC GTGGAGCATGAAGAAGCAAC TTTTTTGGGCCCCAC CBU_0054 50305 - 50862 + | putative chorismate--pyruvate lyase ubiA 50855 - 51718 + | 4-hydroxybenzoate polyprenyl transferase TERM 64 51983 - 51956 - g 72 -5.5 -4.58395 | gap 1, overlap 51959 51961 CCCACTTTTCAAAAA GCACACGCGGAC TGGTT GTCCGCAAG-GC AAAACCTTCCTATCG TERM 65 53467 - 53455 - g 78 -6.3 -4.66609 | TACTGCATTCAAAAA CAAAC ACC GTTTG CATGATCTTCGTATT CBU_0056 51830 - 53680 + | TolC family type I secretion outer membrane protein TERM 66 53814 - 53832 + G 71 -10.2 -2.73542 | AGCGCACACTTGCGC AGCGCACC GAA GGTGCGCC TGGTTCCCGCTTGCG CBU_0057 53728 - 53856 + | hypothetical cytosolic protein CBU_0058 53896 - 53988 + | hypothetical protein TERM 67 56871 - 56855 - g 71 -2.3 -5.05116 | overlap 56847 CTATAAACAATAAAA TTGCT GAGTTAA AGCAA AGAAAAAATAAAGAG TERM 68 57270 - 57281 + G 72 -5.8 -4.46212 | overlap 57241 57267 CTTTTGGTCGGCGCA TGCG GACA CGCA TTTTATGCTAAGAGA CBU_0062 55870 - 57375 + | DnaJ domain-containing protein kdtA 58668 - 57361 - | 3-deoxy-D-manno-octulosonic-acid transferase family protein TERM 69 57914 - 57957 + g 78 -8.3 -4.0896 | gap 3 ATAATTTCTTCACCT TCATGGGTGCTGGCTGCCATGA GCG TCA-GGC-GCTCGC-CCCATGA TTTTCGAAGCGATTT TERM 70 59177 - 59161 - g 70 -3 -5.00616 | overlap 59162 GCGCTGTCCAAAAAA CTTACC GTTCA GGTAAA AAAAGACGGCAAAAT TERM 71 60016 - 60027 + G 71 -4.4 -4.72272 | TTATCCGATCCAATG CAGT GCGA ACTG TTTTTAGTGGAAGGC TERM 72 60634 - 60616 - g 87 -8.1 -5.08824 | gap 1, opp_overlap 60617, overlap 60617 60618 CTCTTAGCCAAAAAA CGCG-CGG CGGA CCGTCGCG ATTGGCTGGAGAAAA parE 58753 - 60678 + | topoisomerase IV subunit B CBU_0065 60867 - 61241 + | rhodanese domain-containing protein CBU_0065a 61292 - 61636 + | hypothetical protein CBU_0066 62226 - 61633 - | 5,10-methenyltetrahydrofolate synthetase TERM 73 61814 - 61775 - G 100 -12.1 -5.03145 | opp_overlap 61812 GAATCTTTTAAAAAA GCCAGGG-CGCGGTCGTAG TAGC CTGCG-CCGCGACCCAGGC GATTACCGTCTTTAT TERM 74 62185 - 62202 + g 80 -5.6 -5.14965 | GTTTCGACGCTGACG CAACTG GTCGCG CAGTTG TTTTTTGCTAAGCAT CBU_0067 62758 - 62435 - | hypothetical protein CBU_0068 62994 - 62755 - | hypothetical protein CBU_0068a 63249 - 63082 - | hypothetical protein TERM 75 63148 - 63169 + g 82 -5 -5.27335 | opp_overlap 63142, overlap 63155 TTTAAAGGATCGAGC CGCTGGCC CCGAAT GGCGGGCG TTTTTGTTTAGAAGG TERM 76 63244 - 63198 - G 93 -13.9 -3.27022 | opp_overlap 63198 63203, overlap 63228 GGTAGCCCATATGAA GCGAAGCGGAATACGGG GAAATAAACAAAT CCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 77 63198 - 63244 + g 100 -16.8 -3.14931 | opp_overlap 63198 63228, overlap 63203 GGTAGCCCATATGAA GCGAAGCGGAATACGGGG AAATAAACAAA TCCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 78 63486 - 63453 - H 74 -4.8 -4.82667 | overlap 63454 GGACGAGAGTAAAAA CGATGAAGAAAA ATCACTTTCG TTTTCTTCATCA TCAGGACCAAGCCTG TERM 79 64226 - 64213 - H 71 -3.7 -4.85599 | TTGACGTTAGAAAAA CGCTC CATC GTGCG CAGAGTTCAACCTTC TERM 80 65604 - 65592 - H 75 -7.7 -4.08064 | AATTCCTGTTCAAAA CTCTC TTA GAGAG GGCCCATTGCAGTTG TERM 81 65924 - 65899 - g 74 -8.2 -4.05816 | overlap 65916 CAAAATGATCAGAAA CTCACGGCGC TTAACC ACGCCGTGGG CAAGAAGTATAGCAA CBU_0072 65611 - 66810 + | ankyrin repeat-containing protein TERM 82 66825 - 66873 + T 100 -14.8 -3.1505 | opp_overlap 66816 66857, overlap 66830 AAAGTAGCTGTATCA GCGAAGCGGAATACGGGG AAATAAAAACAAA TCCCGTATTTCGCTTCGC TTCATACGGGCTACT CBU_0073 68723 - 66900 - | peptidase, M24 family TERM 83 68357 - 68373 + g 71 -5.1 -4.5123 | TTAACCGGGGGTCAA CGGCA AAAACAA TGCCG TTTCTTTGCTGAGTT CBU_0074 69002 - 68781 - | hypothetical protein TERM 84 68856 - 68823 - GH 74 -6.5 -4.3902 | overlap 68825 ATTAGAAAAACTAAA GCCCGTCATCCCCGC GCAG GCGGGGATCCAGCGC ACATGTGCGCAGCGC TERM 85 70166 - 70153 - gH 77 -5.3 -5.00616 | opp_overlap 70142 CCCCCGTTTAAAAAA CGTTT AGCC AAACG CCTGATGGGTCTTTC ubiH 69001 - 70233 + | 2-polyprenyl-6-methoxyphenol 4-hydroxylase TERM 86 71276 - 71288 + G 71 -4.7 -4.59511 | overlap 71287 AATACAATAATGCTA GCCGC CAT GCGTC TTTTTAAAGAATGTT visC 70220 - 71458 + | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family CBU_0077 71573 - 72364 + | hypothetical membrane spanning protein TERM 87 72453 - 72408 - f 100 -18.3 -5.66989 | overlap 72414 TAAAGACTAAAAAAA CTTAAAGCCCGTCATCCCCGC CTGC GCGGAGATGACGGGCCTCGCG GGGATGACGAAGTCT TERM 88 72447 - 72414 - f 100 -24.7 -4.10795 | overlap 72408 CTAAAAAAACTTAAA GCCCGTCATCCCCGC CTGC GCGGAGATGACGGGC CTCGCGGGGATGACG TERM 89 74560 - 74579 + G 71 -9.2 -3.33419 | opp_overlap 74548, overlap 74558 GAAGCCATTGGCTGT GGCCCCGG TTCC TTGGGGCC TGTTAATTTGCCGAT proS 73564 - 75264 + | prolyl-tRNA synthetase TERM 90 75266 - 75295 + G 85 -10.8 -3.78775 | opp_overlap 75266 75270, overlap 75270 CTGTGTTTAGATGAA GAAATCTCGGAC ATCAAC GGCCGAGATTTC TTTCATACTGAGGCG TERM 91 75295 - 75266 - g 81 -11.5 -3.25823 | opp_overlap 75266 75270, overlap 75270 CTGTGTTTAGATGAA GAAATCTCGGACA TCAA CGGCCGAGATTTC TTTCATACTGAGGCG TERM 92 75270 - 75291 + G 72 -5.8 -4.51743 | opp_overlap 75270 75266, overlap 75266 GTTTAGATGAAGAAA TCTCGGAC ATCAAC GGCCGAGA TTTCTTTCATACTGA TERM 93 75291 - 75270 - g 70 -6.5 -4.29106 | opp_overlap 75266 75270, overlap 75266 GTTTAGATGAAGAAA TCTCGGACA TCAA CGGCCGAGA TTTCTTTCATACTGA TERM 94 75399 - 75417 + G 79 -6.6 -4.62984 | overlap 75400 TTGATCATCGGGGTG GGGCGTTG TAA CAGCGCCA TTTTGTCTATCCTGA TERM 95 75400 - 75416 + G 76 -10.1 -3.37067 | overlap 75399 TGATCATCGGGGTGG GGCGTTG TAA CAGCGCC ATTTTGTCTATCCTG CBU_0083 75261 - 75503 + | hypothetical protein TERM 96 75938 - 75953 + G 100 -6.8 -5.65513 | gap 1, overlap 75940 75941 GCAGGTGTATTAATG GCTGCCG CCG CGGC-GC TTTTTTTAATTGCTG CBU_0084 75638 - 77554 + | sulfatase domain-containing protein CBU_0085 77808 - 77963 + | entericidin B TERM 97 78028 - 78048 + G 74 -6.9 -4.39877 | overlap 78029 78038 ATTGATCCTCGTTTT CCCTTGATT CCT AATCAAGGA TTTGTTCCTTCTTCA TERM 98 78029 - 78047 + G 74 -10.4 -3.22841 | overlap 78028 78038 TTGATCCTCGTTTTC CCTTGATT CCT AATCAAGG ATTTGTTCCTTCTTC TERM 99 78271 - 78258 - g 71 -3.7 -4.88388 | opp_overlap 78266, overlap 78259 AGAATTGCACAAAAA GGGCG TGCG CGCCG TGCGATTCAATCTTA CBU_0086 77974 - 78732 + | amidohydrolase family protein TERM 100 78807 - 78827 + G 100 -7.5 -5.95166 | AAATCACGTCGTGCG CTATACCGC TGG GCGGGATGG TTTTTTTTAATTAAC CBU_0087 78747 - 80690 + | phosphoglycerol transferase MdoB and related protein-like protein, alkaline phosphatase superfamily TERM 101 81098 - 81074 - f 70 -2.7 -5.01823 | overlap 81069 81075 AGAACAAGAACAAAA GCGAGCGGCTT TGG AAGCCCGTCGT CAAGAACAGAAACGA TERM 102 81729 - 81751 + G 84 -9.8 -4.26305 | GTATGCGGTGGCACT GCATCACCCG AAA TGGGAGATGC TTTATGTTGGCTTTT CBU_0089 81688 - 81783 + | hypothetical protein CBU_0089a 81905 - 82246 + | hypothetical protein tolB 82485 - 83807 + | TolB TERM 103 83965 - 83928 - g 71 -8.3 -3.55444 | opp_overlap 83937, overlap 83930 83933 CTGTCAGGTTGTAAA CACCATCCAGCCGGCGC AAAT GCGGCGACTGGATTAAG CGATGGCACAGGCGC TERM 104 83963 - 83930 - g 74 -9.5 -3.35597 | opp_overlap 83937, overlap 83928 83933 GTCAGGTTGTAAACA CCATCCAGCCGGCGC AAAT GCGGCGACTGGATTA AGCGATGGCACAGGC TERM 105 83960 - 83933 - g 86 -13.4 -2.84504 | opp_overlap 83937, overlap 83930 83928 AGGTTGTAAACACCA TCCAGCCGGCGC AAAT GCGGCGACTGGA TTAAGCGATGGCACA TERM 106 84292 - 84282 - g 72 -8.2 -3.94877 | overlap 84283 ATCTTGGAACAAGAA GGCG TCG CGCC GAAGCAAATTGATAT CBU_0091 83817 - 84404 + | putative peptidoglycan-associated lipoprotein ybgF 84391 - 85308 + | tol-pal system protein YbgF TERM 107 85360 - 85389 + G 86 -12.3 -3.17194 | opp_overlap 85360 85364 85366, overlap 85366 CCTTGCAAGGCGAAA CAAAGACGGTAGG GCTT CCTACTGTTTTTG TTCGCTTAACAGGAT TERM 108 85366 - 85383 + G 87 -7.7 -5.13741 | opp_overlap 85366 85364 85360, overlap 85360 AAGGCGAAACAAAGA CGGTAGG GCTT CCTACTG TTTTTGTTCGCTTAA TERM 109 85869 - 85857 - g 72 -7.7 -3.93236 | GAGCAACTGGATAAA CAGCA GCT TGCTG ACTGGATCGTCGAAG queE 85311 - 85952 + | radical SAM domain-containing protein TERM 110 86044 - 86029 - f 72 -3.2 -5.05079 | overlap 86030 ATAATGATATAAAAA GTAGCC CAAG GGCTAA AAAACGTAAAGCCCA clpB 86265 - 88844 + | ATP-dependent chaperone ClpB CBU_0095 88841 - 89809 + | sodium-calcium exchanger clS 90968 - 89793 - | putative cardiolipin synthetase CBU_0095a 91360 - 90968 - | acetyltransferase pssA 91430 - 92194 + | CDP-diacylglycerol--serine O-phosphatidyltransferase nadC 92194 - 93018 + | carboxylating nicotinate-nucleotide pyrophosphorylase CBU_0098a 93033 - 93194 + | hypothetical protein TERM 111 93616 - 93586 - g 75 -9 -3.60475 | AAGCGGGACTCCAAA TTCCAAGGATGGTA ATT TCCCTTCCCTGGAA GATAAAGTCGGGATT CBU_0098b 93486 - 93692 + | hypothetical protein TERM 112 93764 - 93749 - g 71 -9 -3.36991 | GATCAGCGTGAAAGA CCTCTG AGTG CAGAGG GGATAGAAGAAATTA sixA 93683 - 94162 + | phosphohistidine phosphatase SixA homolog CBU_0100 94164 - 94565 + | putative lipoprotein nadB 96129 - 94519 - | L-aspartate oxidase TERM 113 95564 - 95552 - G 82 -9.1 -4.26188 | TGGAGATAGGCAAAA CTGGC GCC GCCAG TGGCGAGAACCGTGT CBU_0102 96363 - 96250 - | hypothetical protein CBU_0103 97840 - 96398 - | M20/M25/M40 family peptidase TERM 114 96998 - 96985 - G 87 -8.1 -4.89521 | ACATTTCAAAGAAAA CGCTC CCCA GAGCG TCAGCCGTTTTTTTA TERM 115 97149 - 97164 + g 76 -6.1 -4.58395 | overlap 97163 ATGCCGCTCCCTGTT CCGGA ATGGAG TCCGG TTTTTAAAACCTCGA TERM 116 98043 - 98023 - H 71 -9.8 -2.78679 | overlap 98022 TTTGCCGATGTAAAT CGCGTTAT GGTAG ATAACGCG GCATATACGCAATTG TERM 117 98769 - 98750 - H 80 -2.2 -5.56568 | ATATCAGGAAAAAAA CATTCA CGGTTTGT TGAATG GCCACCGGGTATAAT TERM 118 98842 - 98825 - H 77 -4.9 -4.89339 | opp_overlap 98825 AAGCATTGAGAAAAA TAATAGC AATT GCCATTA TGGTTAAAGTAATCC CBU_0106 99613 - 99723 + | hypothetical protein TERM 119 99757 - 99794 + F 100 -27.9 -4.13014 | gap 1, opp_overlap 99746, overlap 99761 GCAATTCTAATGTTG GCATCGTCGTCCCGCGGC TCG GCCGCGGGACGACG-TGC TTTTAAAAGTCTCAA TERM 120 99761 - 99791 + F 100 -28.4 -3.09272 | opp_overlap 99746, overlap 99757 TTCTAATGTTGGCAT CGTCGTCCCGCGGC TCG GCCGCGGGACGACG TGCTTTTAAAAGTCT CBU_0107 100029 - 101084 + | D-methionine ABC transporter, ATP-binding protein CBU_0108 101107 - 101709 + | D-methionine ABC transporter, permease protein TERM 121 102024 - 102055 + G 76 -8 -4.1891 | opp_overlap 102021, overlap 102025 GGTTATAAAATCGTT TCCATCGGAAAAAC ATTT GTTTACCCGATGGG TTTATATTCCAAAAA CBU_0109 101721 - 102524 + | D-methionine ABC transporter, periplasmic D-methionine-binding protein CBU_0110 103020 - 102535 - | hypothetical protein CBU_0110a 103264 - 103067 - | hypothetical protein TERM 122 103896 - 103886 - g 82 -8.2 -4.52873 | opp_overlap 103885 103886, overlap 103883 TCGCTATAAAAATAA CGCC ATG GGCG ATTTGGAAGCGAAAT TERM 123 103952 - 103965 + G 71 -2.3 -5.09895 | opp_overlap 103952 TCGATTTAAATTAAT CGCAA CGGA TGGCG TTTTTTCGATGGATG TERM 124 104378 - 104367 - g 71 -4.4 -4.65895 | opp_overlap 104367 GCCGGCATGGAAAAA TTGG GCTT CCAA TTGGTGCCGGGCAAT kbl 103425 - 104615 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 125 104691 - 104681 - g 77 -6.8 -4.54727 | CTTTCCAAACTAAAA CCAG CCC CTGG CCTCTGGCTCCACAA TERM 126 104772 - 104760 - g 100 -6.2 -5.79588 | overlap 104762 TTAAAATTAAAAAAA CCGC CATTT GCGG CACGGATTTGCATAT TERM 127 105322 - 105309 - g 71 -3.8 -4.87786 | TTAACTCGACAAAAA CTCC CTTAAC GGAG ACGATGAAAAATCTT TERM 128 105422 - 105436 + G 73 -4.9 -4.70659 | opp_overlap 105422 ACGGTAATGAATAAC GGCGG GAAAA TCGCC TTTTTGGGTATCCCA tdh 104657 - 105685 + | L-threonine 3-dehydrogenase CBU_0113 105933 - 105721 - | hypothetical protein CBU_0114 106086 - 106568 + | nucleotide-binding protein TERM 129 106596 - 106569 - f 100 -16.4 -3.14463 | gap 1, overlap 106572 AACTTTCGTGATTAA CAACCC-CTCCCC ACA GGGGAGAGGGTTG AAAGTGTAGGCTAGG TERM 130 106592 - 106572 - f 100 -14.7 -3.71848 | overlap 106569 TTTCGTGATTAACAA CCCCTCCCC ACA GGGGAGAGG GTTGAAAGTGTAGGC TERM 131 106827 - 106789 - g 95 -12.4 -3.60627 | GCAGTTGATGCCAAA GGTCGAATCGCCATACCG GCG CGGTATCGCGAACCGATC GAAAGCGAAGCGGAC mraZ 106726 - 107208 + | cell division protein MraZ TERM 132 108001 - 107979 - g 77 -7 -4.44608 | TTTATCCAAAAAGAA TCACGCGA TCATTTG CCGCGTGA GATCCCGATTTTGGC TERM 133 108113 - 108089 - g 100 -3.3 -6.02546 | opp_overlap 108096, overlap 108090 108091 CGAAATTAAAAAAAA CCCGCGGGCGC GTA GCGCTCGCTTA CGCATCGTGGAGAAA mraW 107214 - 108137 + | S-adenosyl-methyltransferase ftsL 108134 - 108481 + | cell division protein TERM 134 109061 - 109086 + G 71 -9.7 -3.01712 | overlap 109058 GTTAAAGGATCGTCT CGGCCACGTGA TTGC TGATGTGGCCG TGTTGCAAAAACCCG pbpB 108474 - 110132 + | penicillin-binding protein CBU_0119 111513 - 110137 - | hypothetical protein CBU_0121 111773 - 111642 - | hypothetical protein CBU_0122 111785 - 112063 + | hypothetical membrane associated protein murE 112114 - 113583 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 135 114831 - 114813 - g 77 -3.2 -5.2204 | overlap 114816 GATAATCAAGAAAAA TTATTAAC TGC GTTAAAAA ACGATCTCAATGCCA TERM 136 114901 - 114886 - g 71 -9 -3.40403 | opp_overlap 114883 CGCTTTCCATGAGAA TGGGCA ACAT TGCCCA CGCGTTATTAGAGGA murF 113580 - 114920 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 137 114957 - 114968 + G 71 -4.4 -4.60746 | opp_overlap 114957 CAATTTTTTAAGCCA GCAT TTTC ATGC TTTTCGTGTTTTTAA TERM 138 115385 - 115405 + G 80 -8.9 -4.0749 | ATTTCTCTGCCACGA CCGGTGCAG AGA CGGCACTGG TTATTCCTTTTTTGA mraY 114925 - 116010 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 139 116068 - 116055 - f 70 -2.5 -5.00884 | AGGCGCGTTAAAAAA TATTT AAAG AAATA AATCTCTGGCGCTTG TERM 140 116092 - 116071 - f 100 -14.5 -4.7923 | ATTTAAAGAAATAAA TCTCTGGCG CTTG CGCCAGAGA CAAGAGCGATGGGGC TERM 141 116213 - 116192 - g 76 -5.8 -4.7416 | opp_overlap 116192 116201 TCAAAATGGGAAAAA TCTCGGTC GCTTAT GGCCGAGA CGCTTGCGGCCGAGA CBU_0127 116182 - 116301 + | hypothetical protein CBU_0130 117802 - 117981 + | hypothetical protein TERM 142 118405 - 118388 - g 76 -7.7 -4.19238 | GCTCCAATGGCAAAA CCACCGT GACG ACGGTAG TGGGATTAATGATGA TERM 143 118911 - 118925 + G 73 -5 -4.64766 | CATAGAAAATATGCT TCATGT ATT ACGTGA TTTTTCCGGTATCCG murD 118036 - 119364 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase ftsW 119364 - 120482 + | cell division protein TERM 144 122099 - 122124 + G 80 -7.5 -4.57569 | opp_overlap 122099 122098 122103 GAATCGAATATTAAT TATAGCCGGCG GCAC CGGCGGCCATA TTTTTCCGGCGCTCG murG 122082 - 123158 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase murC 123145 - 124542 + | UDP-N-acetylmuramate--alanine ligase TERM 145 124647 - 124625 - g 78 -8.4 -4.07568 | CGCGTGGGTGGAAAA GCAGAACGAT TTT ATCGTCCGGC CGATTTATTCGATTT murB 124535 - 125485 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 146 126007 - 126017 + G 74 -8.2 -4.05446 | ATCCCCTTTCATGCC GCCG TCA CGGC TTTATCATTAACAAA ftsQ 125485 - 126216 + | cell division protein CBU_0139 126833 - 126213 - | carbonate dehydratase ftsA 127015 - 128256 + | cell division protein TERM 147 129022 - 128982 - g 80 -9 -4.10161 | gap 1, opp_overlap 128984, overlap 128984 TAGCAGCGGCGAAAA CAGAGCTCGCGA-AGCCGC GGAA GCCGCTATCGCAAGCCCTC TGTTGGAAGACGTGG TERM 148 129020 - 128984 - g 87 -11.6 -3.64716 | gap 1, opp_overlap 128984, overlap 128982 GCAGCGGCGAAAACA GAGCTCGCGA-AGCCGC GGAA GCCGCTATCGCAAGCCC TCTGTTGGAAGACGT ftsZ 128257 - 129438 + | cell division protein lpxC 129598 - 130509 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 149 130625 - 130659 + T 100 -14.4 -4.08692 | opp_overlap 130622 130637 AGACCCAGATTAGGG GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCC TTTTAGCCGGGATTC TERM 150 130647 - 130637 - T 76 -4.6 -5.06414 | opp_overlap 130625, overlap 130622 GGGGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGCCTTT CBU_0143 130946 - 130815 - | hypothetical protein TERM 151 130862 - 130880 + g 70 -10.2 -2.66316 | opp_overlap 130874 130875, overlap 130860 GCGCACACCGTGCGC AGCGCGCT AAA AGCGCGCC TGGTCTCCTGCGCGG TERM 152 130980 - 131001 + rH 78 -7.3 -4.34557 | opp_overlap 130979, overlap 130982 TCATCAGAAAAACTT GTGTCATGT AAAA ACATGACCC TTTCCTTTTTAAGTT TERM 153 132077 - 132112 + rH 81 -5.4 -5.03715 | opp_overlap 132076 AAGGCGGGAGCGAAT CCTCTTGCGTCCACAG TGAA TTATGGACCCAATAGG TTTTTTGGGGGTAAT CBU_0146 132760 - 132416 - | hypothetical protein TERM 154 133006 - 132989 - g 85 -11.3 -3.53012 | opp_overlap 132987 132982 CGGTGGTTCGGGAAA CGAGCGT TCGC ACGCTCG GCCTTCGTCATTTCG TERM 155 133552 - 133540 - g 70 -5.5 -4.41633 | opp_overlap 133548, overlap 133547 GAGGGGCAAAAAGAA GAGGA AGT TCCCC CTGAAAATCGAGGGG TERM 156 133725 - 133738 + G 79 -3.7 -5.24129 | overlap 133711 TGTTTATGCCGCTTT GCGCG CACA CACGC TTTTTTATCGAGACG TERM 157 133786 - 133773 - g 76 -3.9 -5.07567 | opp_overlap 133773 TTACATTGTAAAAAA TAATG AAGT CATTA TTGTAGATGAACACA TERM 158 134243 - 134232 - g 71 -2.2 -5.15969 | TCTCAATGCAAAAAA TCAC GAAC GCGA AGCCAAAATTATTGC secA 132760 - 135510 + | protein translocase subunit mutT 135489 - 135902 + | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 159 135991 - 135971 - g 80 -6.7 -4.79752 | TTGAAGAATACAAAA CCTCACGGC CGA GTCGGGAGG ACCCAGATTAAGGGG TERM 160 136041 - 136003 - g 85 -11.8 -3.28416 | opp_overlap 136005, overlap 136004 136017 GAGGACCCAGATTAA GGGGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCCTT TTAGCCTAGATTCCC TERM 161 136040 - 136004 - g 93 -15.3 -2.56728 | opp_overlap 136005, overlap 136003 136017 AGGACCCAGATTAAG GGGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCCT TTTAGCCTAGATTCC TERM 162 136005 - 136039 + G 100 -14.4 -4.15453 | opp_overlap 136004 136003 136017 GGACCCAGATTAAGG GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCC TTTTAGCCTAGATTC TERM 163 136027 - 136017 - g 77 -4.6 -5.06816 | opp_overlap 136005, overlap 136004 136003 AGGGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGCCTTT CBU_0149 135899 - 136045 + | hypothetical cytosolic protein CBU_0150 137082 - 136270 - | hypothetical protein queF 137943 - 137107 - | 7-cyano-7-deazaguanine reductase TERM 164 137519 - 137496 - G 72 -6.8 -4.2349 | gap 1, overlap 137498 137507 TCGCTATATCTAAAA CATCCAAAAGG CTA CCCTTTGGA-G AATAGGCCACGGGTA TERM 165 137518 - 137498 - G 80 -10.5 -3.71913 | overlap 137496 137507 GCTATATCTAAAACA TCCAAAAGG CTA CCCTTTGGA GAATAGGCCACGGGT TERM 166 137728 - 137742 + g 70 -2.8 -4.98531 | overlap 137729 AAATTCACCCCTGGC GGCAAA AGG TTTCCC TTTTTCATTTAACCA coaE 138563 - 137964 - | dephospho-CoA kinase TERM 167 138207 - 138185 - G 78 -10.6 -3.17527 | overlap 138183 138186 CATCCACCACCAAGA TTCGGTCGAT AAA ATCGACCGAC TGCGAGGCCTCGGCA TERM 168 138206 - 138186 - G 87 -14.1 -2.50195 | overlap 138185 138183 ATCCACCACCAAGAT TCGGTCGAT AAA ATCGACCGA CTGCGAGGCCTCGGC pilD 139434 - 138574 - | type 4 prepilin peptidase TERM 169 138633 - 138621 - G 85 -9.1 -4.4009 | overlap 138606 CCGGACCCGACAAAA GGCTG ATC CAGCC CGCTACAGCAATAAA TERM 170 139160 - 139144 - G 74 -10.1 -3.27475 | overlap 139142 TTTTTCATGACAATA TGCGCAG CGA CCGCGCA AGGTTAAGTAGCTTA pilC 140515 - 139460 - | type 4 pili biogenesis protein (plasma membrane protein) TERM 171 139565 - 139587 + g 70 -6.2 -4.2704 | overlap 139567 TTCCAGGCACTCGCT GAGACGATCG TAA CGCTCGTCTA TTTCTTCCTGATAAA TERM 172 139567 - 139585 + g 75 -8.8 -3.73445 | overlap 139565 CCAGGCACTCGCTGA GACGATCG TAA CGCTCGTC TATTTCTTCCTGATA TERM 173 139885 - 139899 + g 77 -4.3 -5.14163 | TATTTTGAATACCCT TTCCA ATGAG TGGAA TTTTTATTAATGCGT TERM 174 140096 - 140082 - G 70 -2.8 -4.94992 | CCAAATTCAGAAAAA GCATTT TGG AATTGC GGGATGACGAACTCC TERM 175 140461 - 140493 + g 70 -7.1 -3.9442 | ATACATTTAATTGAC GGAAAAGGTCCAAAA TAT TTTTTGATCTTATCC TATTTTTCCAGTATT pilB 142061 - 140508 - | type 4 pili biogenesis protein (nuleotide-binding protein) TERM 176 141015 - 141002 - G 81 -3.1 -5.40072 | gap 1 CTTGGCGCAAAAAAA CGC-GT AAT ACAGCG GCGAAATTAAGTCCG TERM 177 141756 - 141744 - G 71 -7.7 -3.75051 | overlap 141742 GATTAAGGGAAAATA TAGCG GAT CGCTA ATAGCTAGCGTAGGT pilA 142473 - 142051 - | type IV-A pilin protein PilA CBU_0156a 142882 - 142721 - | phage integrase family protein CBU_0157 143126 - 143025 - | hypothetical protein CBU_0158 143680 - 143123 - | CRISPR-associated Csy4 family protein CBU_0159 144798 - 143689 - | CRISPR-associated Cas5e family protein TERM 178 145325 - 145339 + r 71 -5 -4.56436 | opp_overlap 145324, overlap 145321 CATTTTACAGTTAAG CAAGTG GCT TACTTG TTCTTTTATTTCGTC TERM 179 145971 - 145985 + r 71 -4.2 -4.98255 | opp_overlap 145955, overlap 145946 145944 TCGTCTCGCTCATGA CGAATG TTC CAATCG TTTTTGTGATTAAGA TERM 180 146286 - 146302 + r 80 -6.5 -4.78572 | opp_overlap 146286, overlap 146281 GCTTCATCGGAAAAA CGGATCG TGT CGATGCG TTTTCTTAATTCGAA TERM 181 146302 - 146286 - R 77 -6.5 -4.62069 | opp_overlap 146281 146286 GCTTCATCGGAAAAA CGGATCG TGT CGATGCG TTTTCTTAATTCGAA TERM 182 147497 - 147515 + r 74 -4.6 -4.88067 | TGTCTTCAAACCCTG GCCATT TAAATAC AATGGC TTTTTCTCGATGGCT TERM 183 147847 - 147871 + r 89 -10.1 -4.23615 | TCATCAAGGTGCTGC TCTTGCTTATG ACG CATCAGCAAGA TTTGTTGGCTGTGGT TERM 184 150961 - 150949 - R 74 -9.1 -3.58905 | ATTCCCCATATACAA CGGTG TTC CACCG CCACCACAAAATCCA TERM 185 151642 - 151653 + r 76 -2.2 -5.4756 | GCTTGAGTAAGCCTC TGCG ATAT TGCA TTTTTTGTTGGGCTT CBU_0165 152283 - 151693 - | hypothetical protein CBU_0166 153058 - 152294 - | condensation domain-containing protein pksH 153046 - 153609 + | enoyl-CoA hydratase CBU_0168 153755 - 154033 + | acyl carrier protein TERM 186 154417 - 154442 + T 75 -2.7 -5.28281 | gap 1, overlap 154415 154412 154420 CTGATATTTTCAATC GATCATATCATT GTC GATGGTATG-TC TTTTGTTTATTTTAT TERM 187 154598 - 154582 - T 71 -5.1 -4.56729 | overlap 154576 ATGAAAATATTAAAA GGGTC TTAAGTG GACCC CCAGTCAAAAAATTT CBU_0173 156106 - 155654 - | hypothetical membrane spanning protein TERM 188 157120 - 157107 - g 100 -3.9 -5.78622 | opp_overlap 157107 TTATCTCAAAAAAAA GAAAA TTGA TTTTC TGGTCTCTGACTTCG CBU_0175 156814 - 157554 + | serine/threonine kinase protein TERM 189 158424 - 158435 + G 70 -5.8 -4.4009 | ACACAAACGGTGATT TGGC GAGT GCCA TTTTATGGAATCCAA degP.1 157619 - 158806 + | serine protease domain-containing protein CBU_0177 160395 - 158815 - | quaternary amine ABC transporter permease/periplasmic amine-binding protein CBU_0178 161150 - 160392 - | quaternary amine ABC transporter ATP-binding protein anmK 162315 - 161197 - | anhydro-N-acetylmuramic acid kinase TERM 190 161334 - 161322 - G 72 -5.5 -4.50159 | overlap 161323 GCCAAGCGAAACAAA CGGCT TCA AGCCA ATCGGGATGAATCCC CBU_0180 163677 - 162319 - | peptidase family M23/M37 domain-containing protein TERM 191 162937 - 162970 + g 79 -6.7 -4.66833 | gap 1, opp_overlap 162956, overlap 162941 162954 TTTGCCCCGATGGCT GAATTCCG-CGGCGAT GAT ATCGCCGTCGCGATAC TTTTTCCCGTTGACG TERM 192 163986 - 163958 - g 80 -4.5 -5.21709 | overlap 163960 CCCGACAGGAAAAAA TATCACGCGCCAA CCA CTCACGCGTGAAA TCGTGATGGAGAATA TERM 193 163984 - 163960 - g 74 -7.1 -4.23988 | overlap 163958 CGACAGGAAAAAATA TCACGCGCCAA CCA CTCACGCGTGA AATCGTGATGGAGAA tyrS 163701 - 164900 + | tyrosyl-tRNA synthetase TERM 194 164924 - 164906 - T 79 -9.5 -3.68988 | opp_overlap 164906 164903 GGTCATTTAACACAA CCCGGAC CTGCT GCCCGGG TGGTTAACTTCATTA CBU_0181a 165194 - 164937 - | hypothetical protein TERM 195 167425 - 167456 + H 100 -15.4 -3.18383 | opp_overlap 167425 167429, overlap 167429 GATTTCTGGCATCAA CAAACCTGTGTTAA TTCC TTGACACAGGTTTG TTGATGCGTGAAACT TERM 196 167456 - 167425 - H 91 -13.2 -3.14344 | opp_overlap 167425 167429, overlap 167429 GATTTCTGGCATCAA CAAACCTGTGTTAA TTCC TTGACACAGGTTTG TTGATGCGTGAAACT TERM 197 167452 - 167429 - H 77 -8.2 -4.24342 | opp_overlap 167425 167429, overlap 167425 TCTGGCATCAACAAA CCTGTGTTAA TTCC TTGACACAGG TTTGTTGATGCGTGA TERM 198 167429 - 167452 + H 89 -10.4 -4.258 | opp_overlap 167429 167425, overlap 167425 TCTGGCATCAACAAA CCTGTGTTAA TTCC TTGACACAGG TTTGTTGATGCGTGA TERM 199 168069 - 168057 - H 71 -6.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGCGA GGGG AGTGAAATAGAACCT CBU_2096 168770 - 169138 + | hypothetical protein TERM 200 169292 - 169274 - f 74 -8.9 -3.57798 | CATAAGTAACGATAA TGTGGGT GAAAA ACCCACA CGCCGAAAGTCTAAG TERM 201 170573 - 170553 - g 70 -2.5 -4.95854 | opp_overlap 170554, overlap 170554 GAAAAAAGTTAAAAA TTGGTATTG AAA CAAGACCAT CTTTTTCCATCACGT CBU_0182 170459 - 170932 + | homing endonuclease, 23S rRNA intron TERM 202 172089 - 172114 + F 100 -13.4 -5.67283 | opp_overlap 172089 GTTTTATATTAAAAA CCCTGTCACT GTAAAA AGTGACAGGG TTTTTTGTTTAGATT TERM 203 172114 - 172089 - f 100 -13.4 -4.8048 | opp_overlap 172089 GTTTTATATTAAAAA CCCTGTCACT GTAAAA AGTGACAGGG TTTTTTGTTTAGATT CBU_0183 172242 - 172514 + | hypothetical protein CBU_0184 173757 - 172597 - | hypothetical membrane associated protein TERM 204 174544 - 174562 + H 82 -11.8 -3.06711 | opp_overlap 174541, overlap 174546 TCCGGTAAATATTCT GACAACCA GGC TGGTTGTC TATCATTTATAGATA TERM 205 174795 - 174819 + H 81 -5.9 -5.00884 | GTGATCATCGCACTT TATTAAGAATA TTT TAGTCTTAATA TTTTTTACAAAAAAT TERM 206 175162 - 175172 + H 74 -4 -5.14985 | opp_overlap 175162 GCCGCCGTTTAGAAG GTAA CCC TTAC TTTTTGTATATTTAA TERM 207 175464 - 175481 + H 81 -7.1 -4.5265 | GTTGTTTTTTTGTTA GCATTTT TAAA AAAATGC TTTTATACTCTGATT TERM 208 175722 - 175736 + H 76 -7.1 -4.17701 | overlap 175735 AGGTAAATATTCTGC CAGCC AGTCA GGCTG TTTATCATTTATAGA TERM 209 179428 - 179452 + G 91 -11.5 -3.81027 | opp_overlap 179435 AACGATCCATTATTT CCAACAATGCT ATC AGCATCGTTGG TTTGAATTCATTGCA CBU_0193 178601 - 179812 + | hypothetical membrane associated protein sda 181207 - 179840 - | L-serine ammonia-lyase TERM 210 180589 - 180600 + g 77 -4.4 -5.14563 | CAATGTGCATTAATC CCAT AAAA ATGG TTTTTTCATCGCGGC TERM 211 182385 - 182403 + G 70 -7.4 -4.00683 | CCGATTATTTTTGCG GCGGCT TATCAAC AGCCGC TTTCGTTGCCTTTTT TERM 212 182533 - 182544 + G 81 -3.6 -5.33405 | TCTCGTCAAGCATAT GGGG TGGG CTCC TTTTTATTTAATCAC TERM 213 182567 - 182580 + G 70 -9.5 -2.97177 | overlap 182566 TTAATCACTTTTTTT GCGGG TTTT CCCGC CTTATTGATTTTACG ampG 181388 - 182689 + | AmpG CBU_0196 182776 - 182988 + | hypothetical protein TERM 214 183011 - 183045 + T 85 -12.5 -3.25918 | gap 1, opp_overlap 183021, overlap 183013 183021 GCCATACATAAACCT TC-TAAAAAAACGCCT CACG AGGCGTTTTTTTATGA TCTGTTTCCAAATTA TERM 215 183013 - 183042 + T 95 -15.3 -2.80821 | opp_overlap 183021, overlap 183011 183021 CATACATAAACCTTC TAAAAAAACGCCT CACG AGGCGTTTTTTTA TGATCTGTTTCCAAA TERM 216 183021 - 183034 + T 100 -8.1 -5.69473 | opp_overlap 183021, overlap 183013 183011 AACCTTCTAAAAAAA CGCCT CACG AGGCG TTTTTTTATGATCTG TERM 217 183034 - 183021 - T 93 -8.1 -5.41746 | opp_overlap 183013 183011 183021 AACCTTCTAAAAAAA CGCCT CACG AGGCG TTTTTTTATGATCTG CBU_0197 185847 - 183058 - | hypothetical outer membrane protein CBU_0198 187580 - 185844 - | outer membrane protein, OMP85 family protein TERM 218 186095 - 186080 - G 70 -6 -4.25848 | AACTTCCGACGAAAA GGCCGC GCCC GGGGCC AATGGAATTGAAGCT TERM 219 186853 - 186841 - G 79 -7.7 -4.43351 | ACAGTCGAAAAATAA TCGCT GTT AGCGA GCCCTTCCCGTGTAC TERM 220 186943 - 186931 - G 76 -6.3 -4.45517 | AAACGATGGAGAAAA CTTTC ATG GAAAG GCGTGGCTGAGAAAT TERM 221 187085 - 187071 - G 91 -8.5 -5.00616 | TCGGGCTTTAAAAAA GCCGC GTCCT GCGGC GACATTAAATAAATC TERM 222 187156 - 187138 - G 95 -3.1 -5.63103 | gap 1, overlap 187141 TCTGAATCAAAAAAA TCACCCGC TTTT ACGGG-GA AGTTTTCGTAAAGGT TERM 223 187670 - 187644 - H 72 -9.4 -3.01712 | opp_overlap 187668, overlap 187667 CTTTCTTTCTCAAGA CCCGTATTTCGC TTC GCTACATACGGG CTACGGTCCTCCATT coaA 187721 - 188677 + | pantothenate kinase TERM 224 188869 - 188881 + G 73 -2.6 -5.10163 | AATCTCAGATCTGCC TGGC GGGTG GCCG TTTTGTTTTCCGGTT CBU_0200 188678 - 189565 + | aldose 1-epimerase family protein CBU_0201 190041 - 189646 - | ankyrin repeat-containing protein TERM 225 190908 - 190861 - H 93 -13.6 -3.1544 | gap 1, opp_overlap 190872 190906 TCACAGCATATTCAA GTTCTC-TCTAACGCGCCATTTC GGG GAAATGGCGCGTTAGTTGAGCAG GGGATCGCTGTTTTC TERM 226 190872 - 190896 + H 100 -18.7 -3.33696 | opp_overlap 190861 TCAAGTTCTCTCTAA CGCGCCATTTC GGG GAAATGGCGCG TTAGTTGAGCAGGGG TERM 227 191329 - 191304 - g 74 -3.3 -5.12785 | gap 1 CAATTAAAAAATAAA CAAAAGCC-CCG CTA CGACGGTTTTTG TCGCGATAAAGCACC TERM 228 192023 - 192036 + G 74 -3.7 -4.96501 | opp_overlap 192023 AACACTCAAGGAAAT GGCGC AGCG GAGCC TTTATTTTTATCAAG gltX-1 190941 - 192362 + | glutamyl-tRNA synthetase TERM 229 192533 - 192547 + G 74 -4.2 -4.89477 | TGCTAAAGGATTTTG CTACTC AGC GAGGAG TTTTATTATTAAACG CBU_0206 192424 - 192816 + | hypothetical membrane spanning protein TERM 230 192965 - 192949 - f 70 -9.5 -2.62616 | opp_overlap 192943 TCAGTCGGTAGAGCA GCTGATT TGT AATCAGC CGGTCGTAGGTTCGA TERM 231 193173 - 193199 + G 70 -6 -4.15841 | overlap 193178 ACGAAAGCAGCCACT TTTAATTGATCA TAT TGATCAATTACG TTTGTCATTTAGTCA CBU_0207 193066 - 193371 + | hypothetical protein TERM 232 194770 - 194756 - g 70 -6.4 -4.21194 | TTGCATTAGTCAAAA TGGAGA TGT TCCCCA AAGCGTTCCCTCGTA TERM 233 194800 - 194814 + G 73 -2.8 -5.06414 | opp_overlap 194800 ATTTCAAATGGAATA GCAGAA ATA TTCTCC TTTTTATTAGAAAGG TERM 234 195068 - 195053 - g 70 -6.2 -4.25056 | GACGGTATCAACAAA TCTCTT CCCA AAGAGA GGGAGTAATACAAGA CBU_0209 194626 - 195606 + | hypothetical protein CBU_0210 195585 - 195722 + | hypothetical protein TERM 235 195935 - 195962 + T 75 -2.6 -5.26316 | opp_overlap 195928 195942, overlap 195938 TTTATAATCGTCTCT TAACGCAGCGAA TATT TACGCTACGTTC TTTTTTATAGCATAA TERM 236 195938 - 195959 + T 72 -4.3 -4.72201 | opp_overlap 195928 195942, overlap 195935 ATAATCGTCTCTTAA CGCAGCGAA TATT TACGCTACG TTCTTTTTTATAGCA TERM 237 196658 - 196636 - T 80 -6.2 -4.74801 | opp_overlap 196655 GAACCGGAGGAAAAA TCAGAAGCGC CTA GCACATCCGA ATCACGTCGGTTGTC TERM 238 197094 - 197066 - T 70 -9.8 -2.70661 | gap 1, overlap 197065 AATAGACACCATAAC CTTTTCTCCT-TG AGGG CAGAGGAGAAAAG CCGGGAGGGGAATTC CBU_0213 197560 - 197402 - | hypothetical protein TERM 239 198296 - 198313 + G 72 -8.4 -3.6914 | overlap 198292 AAAACGTCTTCGATG CGCTGG CCGTCA CCAGCG TTGCTTTCTTGGGGT CBU_0214 197944 - 198663 + | integral membrane protein TERM 240 198674 - 198693 + T 100 -7.8 -5.80364 | opp_overlap 198674 GATAAATTGAAAAAA GGCGCC GATTTGAA GGCGCC TTTTTTTCTTCAGAT TERM 241 198693 - 198674 - T 91 -7.8 -5.24449 | opp_overlap 198674 GATAAATTGAAAAAA GGCGCC GATTTGAA GGCGCC TTTTTTTCTTCAGAT CBU_0215 200316 - 198718 - | NlpC-P60 family protein TERM 242 199323 - 199312 - G 72 -7.2 -4.12942 | GGAAACGGTGGAAAA GCCG ATAG CGGC AGAACCATTCAAAGC TERM 243 201817 - 201783 - H 100 -14.4 -4.08692 | opp_overlap 201780 201795 GAATCCCGGCTAAAA GGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGGTCC TERM 244 201795 - 201805 + H 76 -4.6 -5.06414 | opp_overlap 201783, overlap 201780 AAAGGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC CBU_0217a 201949 - 202089 + | hypothetical protein cydA-1 202174 - 203724 + | cytochrome d ubiquinol oxidase subunit I CBU_0220 204884 - 205003 + | hypothetical protein TERM 245 205046 - 205028 - g 85 -10.3 -4.29396 | opp_overlap 205022 AATTATTGACGAAAA GCCTTCG CTTCT CGAAGGC GATGTGCATGTGTGG TERM 246 205405 - 205415 + G 73 -4.6 -4.85599 | opp_overlap 205405 TTCACGCCGAGCAAA TCGC CGA GCGG TTTTTCTCGCCTGAG CBU_0221 204996 - 205727 + | phosphopantethiene-protein transferase domain-contain protein TERM 247 205825 - 205850 + F 93 -6.9 -5.38497 | TGTGTATGGCATCGG TGAAAAAGCCC GACA GGGTTCTTTCA TTTTTTGATTTGAGT TERM 248 205999 - 206051 + G 70 -9.2 -3.20633 | opp_overlap 206030 206032 206033, overlap 206002 206003 206035 GAAAGAAGACAGATG GTTGTGTCGCTTCGCGACAATTTA AAAAA TATATTGCGGCGAAGCCGCACAGC TTCACTGTCTTCTGC TERM 249 206003 - 206017 + G 71 -10 -2.7395 | overlap 206002 205999 GAAGACAGATGGTTG TGTCGC TTC GCGACA ATTTAAAAAATATAT TERM 250 206047 - 206033 - g 77 -11.4 -2.79579 | opp_overlap 205999 206035, overlap 206032 206030 ATTTAAAAAATATAT TGCGGC GAA GCCGCA CAGCTTCACTGTCTT CBU_0221a 205996 - 206112 + | hypothetical protein TERM 251 206207 - 206191 - f 70 -9.5 -2.62616 | opp_overlap 206182 TCAGGCGGTAGAGCA CTTCCTT GGT AAGGAAG AGGTCACCGGTTCAA CBU_0221b 206314 - 207507 + | protein translation elongation factor Tu (EF-TU) secE 207752 - 208135 + | protein translocase subunit nusG 208160 - 208726 + | transcription termination/antitermination factor NusG TERM 252 208896 - 208867 - g 72 -5.7 -4.54026 | overlap 208892 TGGCAAAGAAAATAA CGGGCTATATTCG CCTT CAAATAAAGGCCG GTGAAGCCAATCCCA TERM 253 209035 - 209047 + G 95 -3.3 -5.62288 | overlap 209036 TCATTATCACGGTGT ATGCG GAT CGCAC TTTTTCTTTTATTAC rplK 208851 - 209288 + | LSU ribosomal protein L11P TERM 254 209578 - 209549 - g 70 -2.7 -4.93318 | gap 1, opp_overlap 209549 GATAATGTAGAAAAA GCCAAAGCAG-CCG GAG CGGACATCGTTGGC TTGGATGATCTCGCT rplA 209288 - 209986 + | 50S ribosomal protein L1 TERM 255 210106 - 210066 - f 71 -4.8 -4.58424 | gap 2, opp_overlap 210105, overlap 210061 210068 210069 GATGACGATAGAAAA GAT-TTCG-CGGTAGACGTC ATT GACGTTAACCGTCGAAGACC GTGAGTACCTGATGG TERM 256 210192 - 210211 + F 86 -9.4 -3.99324 | opp_overlap 210196, overlap 210196 GTCACCGAAACGGTG GAAATAGC AAGA GCTATTTC TTTGTAATAATAACG TERM 257 210296 - 210266 - g 76 -3.9 -5.0916 | overlap 210267 210286 TCTCGAACAGAAAAA GGCAATGGTTGCG GAAAT CACAGACATCGCC AATCAAGCAGTTTCG TERM 258 210390 - 210370 - g 86 -8.1 -4.7497 | opp_overlap 210382, overlap 210371 CCGACTTACGAAAAA GCGCTCGCG AAG CGCGCGTGC ATATGCGCGTGTATC TERM 259 210387 - 210371 - g 73 -9.3 -3.445 | opp_overlap 210382, overlap 210370 CGACTTACGAAAAAG CGCTCGC GAA GCGCGCG TGCATATGCGCGTGT rplJ 210240 - 210764 + | LSU ribosomal protein L10P rplL 210798 - 211178 + | LSU ribosomal protein L12P (L7/L12) CBU_0230 211191 - 211310 + | hypothetical protein TERM 260 211402 - 211389 - g 79 -8.1 -4.38712 | opp_overlap 211388 CTTATCCTGAGAAAA GACGC GCGC GCGTC AATTTAGGGAAACGC TERM 261 211603 - 211619 + G 76 -7.9 -4.28254 | CGTAGGTTACAGTTT GGGGGGA GAA TCCACCC TTTTCGATGTTGAGG rpoB 211325 - 215458 + | DNA-directed RNA polymerase beta chain TERM 262 215536 - 215505 - f 90 -9.4 -4.323 | overlap 215506 215507 CCGAAAGACTTAAAA CCCGTCATCTCCGC TTGT GCGGGAATGACGAA GCCTAAAGATGAAAG TERM 263 215535 - 215506 - f 79 -10.7 -3.18657 | overlap 215505 215507 CGAAAGACTTAAAAC CCGTCATCTCCGC TTGT GCGGGAATGACGA AGCCTAAAGATGAAA TERM 264 215534 - 215507 - f 81 -12 -2.50471 | overlap 215506 215505 GAAAGACTTAAAACC CGTCATCTCCGC TTGT GCGGGAATGACG AAGCCTAAAGATGAA TERM 265 216121 - 216138 + G 70 -2.7 -4.89567 | TATTAGACGTGACGC TGCGT GATATCGA ACGCA TTTTATATTTTGAAG TERM 266 217556 - 217524 - g 91 -7.8 -5.1861 | CCGATGACGAAAAAA GCGGTAACAAAATT ACTTG ACTTCTGCTACCGC AATTTAGGACTGAAA rpoC 215727 - 219971 + | DNA-directed RNA polymerase subunit beta' TERM 267 220092 - 220140 + F 100 -16.3 -3.09516 | opp_overlap 220092, overlap 220098 220108 GCCCGTATGAGCGAA GCGAAATACGGGACGATAGATGA CAT TCATTTGTTTTTCCGTATTTCGC TTCGCTCATACGGGC rpsL 220265 - 220687 + | SSU ribosomal protein S12P rpsG 220700 - 221275 + | 30S ribosomal protein S7 TERM 268 221609 - 221626 + G 76 -5.5 -4.84311 | TCCCTGCGCGTGTTA GATGGCG CTGT CGCTGTC TTTTGTTCTGTGGGC fusA 221285 - 223384 + | protein translation elongation factor G (EF-G) tuf-2 223400 - 224593 + | elongation factor Tu rpsJ 224774 - 225115 + | 30S ribosomal protein S10 rplC 225137 - 225790 + | LSU ribosomal protein L3P rplD 225787 - 226407 + | LSU ribosomal protein L1E (= L4P) rplW 226404 - 226691 + | LSU ribosomal protein L23P rplB 226711 - 227538 + | 50S ribosomal protein L2 rpsS 227551 - 227838 + | SSU ribosomal protein S19P rplV 227838 - 228185 + | 50S ribosomal protein L22 rpsC 228185 - 228868 + | SSU ribosomal protein S3P rplP 228880 - 229293 + | 50S ribosomal protein L16 rpmC 229294 - 229491 + | LSU ribosomal protein L29P rpsQ 229502 - 229753 + | SSU ribosomal protein S17P rplN 229764 - 230132 + | LSU ribosomal protein L14P rplX 230144 - 230467 + | LSU ribosomal protein L24P TERM 269 230774 - 230762 - g 70 -2.7 -4.95758 | ATGACATGATAAAAA TTTCG GGG CAAAA ACCCCTCATCACCTA rplE 230584 - 231132 + | 50S ribosomal protein L5 rpsN 231137 - 231436 + | SSU ribosomal protein S14P rpsH 231430 - 231831 + | SSU ribosomal protein S8P rplF 231869 - 232405 + | 50S ribosomal protein L6 TERM 270 232448 - 232423 - g 100 -9.7 -5.2204 | overlap 232427 GATAAGCAAGAAAAA CGAATTCGACG CGCG CGTCGAACACG AGCAAAAATCAAAGA TERM 271 232444 - 232427 - g 81 -9.9 -3.94974 | overlap 232423 AGCAAGAAAAACGAA TTCGACG CGCG CGTCGAA CACGAGCAAAAATCA rplR 232405 - 232758 + | LSU ribosomal protein L18P rpsE 232770 - 233276 + | SSU ribosomal protein S5P CBU_0256 233280 - 233471 + | ribosomal protein L30 TERM 272 233574 - 233562 - g 91 -10.5 -4.74103 | GCGGCAAGGGAAAAA CCGCG GGT CGCGG ACATAAGGGGCAACA TERM 273 233820 - 233802 - g 70 -6 -4.26079 | overlap 233795 233804 TCAAACGAGTCAAAA TATTTGCC GCC GGCAAATT AGAGAAGCCAGTGAC TERM 274 233818 - 233804 - g 75 -8.6 -3.72347 | overlap 233795 233802 AAACGAGTCAAAATA TTTGCC GCC GGCAAA TTAGAGAAGCCAGTG rplO 233474 - 233905 + | LSU ribosomal protein L15P TERM 275 234085 - 234095 + G 71 -2.4 -5.04987 | GCTCTTTTTCATCAG CACG AAA CGGG TTTTTTGGGAATGTT TERM 276 234387 - 234414 + G 75 -8.4 -3.78034 | overlap 234384 234407 ATTTTACTTCACCGC CATCGTCACCTT GGTG ACGGGGACGATG TTCTTAATGTGGCTA TERM 277 235055 - 235074 + G 76 -4.2 -5.0925 | overlap 235056 235057 CTGTTTACCTTGCAT TGGTGGCA TTGC TGCCACAG TTTTTGATTTTGGCC TERM 278 235231 - 235213 - g 82 -5.2 -5.26875 | opp_overlap 235226, overlap 235217 TCCTTAATGAAAAAA TCAGGCCT GAA AGGCTCGA AGTTTGGGCTTATTC secY 233923 - 235251 + | preprotein translocase subunit SecY rpmJ 235264 - 235386 + | LSU ribosomal protein L36P TERM 279 235515 - 235478 - f 100 -18.5 -4.13014 | gap 1, overlap 235481 TTGAGACTTTTAAAA GCA-GGTCGTCCCGCGGC TTG ACCGCGGGACGACGATGC CAAAATTAGAATGGC TERM 280 235511 - 235481 - f 100 -19 -3.09272 | overlap 235478 AGACTTTTAAAAGCA GGTCGTCCCGCGGC TTG ACCGCGGGACGACG ATGCCAAAATTAGAA CBU_0259 235526 - 235621 + | hypothetical protein rpsM 235626 - 235985 + | 30S ribosomal protein S13 rpsK 236013 - 236384 + | 30S ribosomal protein S11 rpsD 236397 - 237017 + | 30S ribosomal protein S4 rpoA 237030 - 238013 + | DNA-directed RNA polymerase subunit alpha rplQ 238025 - 238405 + | LSU ribosomal protein L17P TERM 281 238456 - 238480 + G 71 -5 -4.48073 | gap 1, opp_overlap 238459 238462 AAGCAATTTACCACT CAACCAGCGCT ATTC AGCGC-GATTG TTATTCTTTTTTTCA TERM 282 239063 - 239075 + G 82 -7.7 -4.564 | overlap 239055 TTGATTTTGCTTTAT GGAAG CAT CTTCC TTTTACTTTAGGATT CBU_0265 238408 - 239634 + | glucose/galactose transporter TERM 283 240610 - 240646 + F 89 -9.6 -4.21773 | opp_overlap 240622, overlap 240622 CAAAGTTTTATTCTA GCTTCAGAAAAAGAAG CCTCC CTTCTTTTTCTGACCC TTCTTTCTGTTAAGG TERM 284 240634 - 240622 - f 70 -3.4 -4.84359 | opp_overlap 240610 240622 CTAGCTTCAGAAAAA GAAG CCTCC CTTC TTTTTCTGACCCTTC TERM 285 240622 - 240634 + F 70 -3.4 -4.8543 | opp_overlap 240622, overlap 240610 CTAGCTTCAGAAAAA GAAG CCTCC CTTC TTTTTCTGACCCTTC TERM 286 242349 - 242388 + G 89 -14.5 -3.01924 | gap 1, opp_overlap 242354, overlap 242351 GAAGGCTATTCCTTC G-ATAACTGTCACTCCGG AAAAC CCGGAGTGACAGTAATGC TATTAAAACGGAATA TERM 287 242351 - 242385 + G 100 -17.3 -2.73875 | opp_overlap 242354, overlap 242349 AGGCTATTCCTTCGA TAACTGTCACTCCGG AAAAC CCGGAGTGACAGTAA TGCTATTAAAACGGA CBU_0270 241159 - 242379 + | trans-2-enoyl-CoA reductase TERM 288 242382 - 242354 - T 100 -19.7 -3.29144 | opp_overlap 242351 242349 CTATTCCTTCGATAA CTGTCACTCCGGA AAA CCCGGAGTGACAG TAATGCTATTAAAAC ssb 242867 - 242391 - | single-stranded DNA-binding protein TERM 289 242426 - 242416 - G 74 -6.8 -4.32436 | ATATCATCATCAAAA TCGG CCA CCGA ACTGTCGTCTCCAGC CBU_0272 244293 - 242917 - | transporter, MFS superfamily TERM 290 243292 - 243282 - G 72 -8.2 -3.93038 | opp_overlap 243281 243277 GAGCGGAAGAGTAAA CGCC CAT GGCG GTTCCCTTGTGGCGA TERM 291 243801 - 243791 - G 70 -5.4 -4.371 | CCTAGGATAGCAAAA GCAA GCG TTGC CCAAAAAATGCCCTC CBU_0273 245124 - 244378 - | hypothetical protein uvrA 245376 - 248240 + | excinuclease ABC subunit A CBU_0274a 248486 - 248322 - | hypothetical protein TERM 292 248438 - 248476 + g 71 -9.5 -3.07816 | opp_overlap 248446, overlap 248444 CTGTATGGAGCGCCA GCGGAATACGGGAACCG ATGCG CAGCACCCGTATTTCGC TTCGCTCCATACAGG TERM 293 249047 - 249037 - g 70 -5.4 -4.33274 | GTCAGAGCAGCAAAA CGTT TCT AACG GCCAGAGCCATGCTT TERM 294 249346 - 249322 - g 70 -7.1 -3.90328 | GACAATGGTTAGAAA GCATCGCAAAC AGT GGTTGTGATGC GGTAGGGTTAGATTG TERM 295 249460 - 249480 + G 80 -8.3 -4.15565 | opp_overlap 249457 249460 249462 CAAACCCTGAAAGCA TATCGACAG CGG CCGTCGATA TTTTAAAATCCTACG TERM 296 249480 - 249460 - g 72 -10.5 -2.93381 | opp_overlap 249460, overlap 249457 249462 CAAACCCTGAAAGCA TATCGACAG CGG CCGTCGATA TTTTAAAATCCTACG hemE 248550 - 249635 + | uroporphyrinogen decarboxylase TERM 297 250293 - 250303 + G 71 -2.4 -5.03145 | opp_overlap 250285, overlap 250291 GGGGAAAGCAGTAGC CGCC GAT GGCA TTTTTTCCGCCATTG CBU_0276 249676 - 250755 + | rubredoxin-NAD(+) reductase CBU_0277 250960 - 250808 - | hypothetical protein CBU_0278 251008 - 251601 + | MarC membrane protein CBU_0279 252452 - 251625 - | amidinotransferase family protein TERM 298 252847 - 252817 - g 71 -3.8 -4.74706 | opp_overlap 252819, overlap 252819 GTCAATATGGAAAAA TACCGCGCTATTGG CCA CCAAATCCGCGGTT TATTTCAGGAGTATA TERM 299 252819 - 252845 + G 73 -6.4 -4.42062 | opp_overlap 252819 252817 CAATATGGAAAAATA CCGCGCTATTGG CCA CCAAATCCGCGG TTTATTTCAGGAGTA dinP 252514 - 253632 + | DNA polymerase IV TERM 300 253737 - 253721 - T 88 -3.7 -5.77571 | overlap 253722 ACTAAAAAACAAAAA CCTTCAC AAA ATGAAGA CCTAAACTTAACAAC CBU_0282 254551 - 254039 - | transcriptional regulator TERM 301 254536 - 254552 + g 77 -9.5 -3.62572 | opp_overlap 254525, overlap 254524 ACAAGTCGACTCGAA GTTGACA ATT TGTCAAC TTTAAAATGCTGCTG CBU_0283 254719 - 254892 + | hypothetical protein TERM 302 254925 - 254896 - g 77 -11.5 -2.66216 | opp_overlap 254919, overlap 254895 254898 TGGCATTATTAGAAT TATGCGGCAACAG GCTT CGATTGCCGCATA GCAGTTCACTTAAAA TERM 303 254923 - 254898 - g 70 -9.7 -2.87243 | opp_overlap 254919, overlap 254896 254895 GCATTATTAGAATTA TGCGGCAACAG GCTT CGATTGCCGCA TAGCAGTTCACTTAA CBU_0284 254880 - 255107 + | prophage protein gp49 CBU_0285 255111 - 255431 + | hypothetical protein TERM 304 256468 - 256456 - g 74 -7.7 -4.06903 | AATTGTTAAAGCAAA CGCAT TAT ATGCG AACTTTATTCCCGGA pcnB 255663 - 256982 + | poly(A) polymerase TERM 305 257260 - 257273 + G 75 -5.3 -4.84311 | ATGGGGGCCGCGGAT TATCG ATCT CGATA TTTTATTGTATGGAG TERM 306 257518 - 257464 - g 79 -2.8 -5.38249 | gap 1, overlap 257465 ACGAATTATAAAAAA CCCCTCTTCACTACTTCCTTTTCCC TTTAGG GGGAAAGGGTTGGAG-AAAGAGGGT GATACAAAGGCGCTA folK-2 256979 - 257539 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 307 257949 - 257964 + G 76 -10.4 -3.36581 | AATCGTTACTCTCGG CGGCGA CGTA TCGCCG TTCGTTCCCCCTTTA coaD 257536 - 258015 + | pantetheine-phosphate adenylyltransferase CBU_0289 258030 - 258275 + | ferredoxin TERM 308 258286 - 258276 - T 73 -5.4 -4.53398 | opp_overlap 258274 258276 CAAGATGAAAAATAA CTAG ACC CTAG TGTTATTTCGGGATT rpmG 258501 - 258289 - | LSU ribosomal protein L33P TERM 309 258527 - 258540 + r 76 -2.4 -5.41143 | overlap 258532 TTATTTGCTTTCTTT TTCG CGTTCC CGAA TTTTTTTGAGAACTG rpmB 258751 - 258512 - | LSU ribosomal protein L28P TERM 310 258608 - 258619 + g 71 -4.4 -4.72272 | overlap 258593 CGTAGAAACGGTCAA CGTT ATAA AACG TTTTTCATCCGGCAG CBU_0291b 259885 - 259529 - | hypothetical protein dut 259899 - 260384 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 311 261109 - 261083 - g 75 -5 -4.84353 | opp_overlap 261083 261088, overlap 261088 ATAAAGTAAAAGAAA CGCAAGCCGACC TTG GGTTGGCTTTTG ATGGCGATGCAGATC TERM 312 261088 - 261104 + G 85 -10.1 -4.26076 | opp_overlap 261083 261088, overlap 261083 GTAAAAGAAACGCAA GCCGACC TTG GGTTGGC TTTTGATGGCGATGC CBU_0294 260362 - 261777 + | phosphoglucomutase CBU_0295 263243 - 261774 - | hypothetical protein pyrE 263887 - 263240 - | orotate phosphoribosyltransferase TERM 313 264165 - 264140 - g 76 -6.1 -4.57073 | TATTGTCGCGAAAAA CCCGATCGAGT GACC ACCCGATTAGG CTGGGAACATGCCGA xth 263915 - 264694 + | exodeoxyribonuclease III TERM 314 264849 - 264834 - T 81 -11.8 -2.52896 | opp_overlap 264816 264815 GCAGGCGGGAATCCA GCGCGC TTTA GCGCGC AGCGCACGTAGTGCG murI 265792 - 264950 - | glutamate racemase rph 266511 - 265792 - | ribonuclease PH TERM 315 266123 - 266108 - G 75 -9 -3.67878 | opp_overlap 266097 266080 266079 ATCATGGCAATACAA CTGCCA TTAA TGGCAG CGGTGCGCGTTCCTC CBU_0300 266649 - 267512 + | hypothetical protein gmk 267505 - 268125 + | guanylate kinase TERM 316 268203 - 268193 - f 70 -5.4 -4.43351 | AGATTTTAAAAATAA TGAG GTC CTCA TGGCACGCGTAACAG rpoZ 268203 - 268496 + | DNA-directed RNA polymerase, omega subunit TERM 317 269526 - 269514 - g 74 -7.7 -4.05446 | CTGTCGAAGTACAAA TCCGT ACA ACGGA AATGGATCGCATGGC TERM 318 270031 - 270044 + G 74 -6.7 -4.41616 | ATTGAAAAAAGCGTT GGGAA ATTA TTCCC TTTCTTTAAAAAAAT spoT 268550 - 270673 + | GTP pyrophosphokinase CBU_0304 270701 - 271147 + | putative endoribonuclease L-PSP TERM 319 271758 - 271786 + G 82 -8.9 -4.26461 | opp_overlap 271751 271756 AAAAAATACGAACTC CGCTTCGGTTG CCGACAT TAACCGAGGCG TTATTTTACGTTCAT TERM 320 271996 - 271973 - g 73 -2.5 -5.08088 | AATTGGCAAGAAAAA TTAAAACGT GCATTA ACGTTTGAA TTAACATCGGCTCAG TERM 321 273018 - 273042 + G 74 -3.5 -5.14563 | overlap 273021 CACGAGCCCGCCTAA CTTTGTTGCGT GAT ACGCAAGATGG TTTTTTGGTGGCGCA recG 271154 - 273268 + | ATP-dependent DNA helicase CBU_0306 273549 - 273668 + | hypothetical protein CBU_0307 273668 - 274363 + | OmpA-like transmembrane domain-containing protein TERM 322 274398 - 274381 - Tf 82 -8.3 -4.29845 | opp_overlap 274382, overlap 274382 TAAGCCAATCGAAAA GGGGGGC ATCT GCCCCCT TTTTTTTGGCCTCGC TERM 323 274397 - 274382 - Tf 83 -11.8 -3.17184 | opp_overlap 274382, overlap 274381 AAGCCAATCGAAAAG GGGGGC ATCT GCCCCC TTTTTTTTGGCCTCG TERM 324 274382 - 274397 + TF 100 -11.8 -5.78622 | opp_overlap 274382 274381 AAGCCAATCGAAAAG GGGGGC ATCT GCCCCC TTTTTTTTGGCCTCG CBU_0307a 274692 - 274447 - | hypothetical protein TERM 325 274486 - 274474 - Gf 100 -5.5 -5.65678 | AGAAAAGACAAAAAA GACGA AAA CCGTC ACCTGCCGTCCTCGC htpG 274678 - 276648 + | chaperone protein htpG TERM 326 276717 - 276659 - fH 91 -10.7 -4.614 | opp_overlap 276670, overlap 276665 276670 CCTAATTACACAAAA TAGAAAGCAAATGCCCATTAATTAAAC GGATT GTTTAATTAATGGGCATTTTTTTTTTG TAATTGAATATCCTT TERM 327 276711 - 276665 - fH 100 -14.1 -4.53648 | opp_overlap 276670, overlap 276659 276670 TACACAAAATAGAAA GCAAATGCCCATTAATTAAAC GGATT GTTTAATTAATGGGCATTTTT TTTTTGTAATTGAAT TERM 328 276706 - 276670 - fH 100 -18.4 -4.25088 | opp_overlap 276670, overlap 276665 276659 AAAATAGAAAGCAAA TGCCCATTAATTAAAC GGATT GTTTAATTAATGGGCA TTTTTTTTTTGTAAT TERM 329 276670 - 276706 + FH 100 -19.1 -6.50115 | opp_overlap 276665 276659 276670 AAAATAGAAAGCAAA TGCCCATTAATTAAACG GAT TGTTTAATTAATGGGCA TTTTTTTTTTGTAAT TERM 330 276848 - 276867 + FH 70 -3.6 -4.83677 | overlap 276843 TGAGAAAAGCTAAGA TAGGCTTA AATA TAGGCTTA TTTTGATTTTGTTTT TERM 331 276930 - 276940 + G 72 -8.2 -3.91412 | opp_overlap 276929 276930 AACAACTACAAAACT CGCC ATA GGCG TTTCTGCACTATGCT CBU_0311 276910 - 277668 + | outer membrane porin P1 TERM 332 277666 - 277686 + T 76 -6.9 -4.41206 | opp_overlap 277664 277669 277681 TACCTGTTCAATATC TAACAGAGT TAA ACACTGTTA TTTTATCAGGTAGTT TERM 333 277714 - 277748 + T 91 -10.7 -4.4009 | opp_overlap 277716 GTTGTTTCTGGCGAA CAGCCTCTAGACCTC AAAAG GAGGGATGGAGGCTG TTTTCTGACGTCAGC TERM 334 277781 - 277811 + T 93 -7 -5.41359 | opp_overlap 277781 TTAAGTAATCAAAAA TAGGCTTCGTTA TGTTATT TAGCGAAGTCTA TTTTTTAATTTAGTT folD 278678 - 277827 - | methenyltetrahydrofolate cyclohydrolase TERM 335 278963 - 278941 - H 74 -9.2 -3.56568 | overlap 278947 AGACTAAAATACTAA GAAAAACGCC GTT AGCGTTCTTC AAGCCCCTCTTAGCC TERM 336 278957 - 278947 - H 80 -4.6 -5.20606 | overlap 278941 AAATACTAAGAAAAA CGCC GTT AGCG TTCTTCAAGCCCCTC CBU_0312a 278988 - 279107 + | hypothetical cytosolic protein TERM 337 279227 - 279205 - T 70 -2.5 -5.03314 | overlap 279206 279209 GCCATTTCTAAAAAA CCACCGTCG TCCCG CGCAGGCGG GGACCCAGCGCACGA TERM 338 279249 - 279270 + T 76 -10.9 -2.74144 | gap 1, opp_overlap 279206, overlap 279248 279251 AGCGCACGACGTGCG CT-GCGCGCT GAA AGCGCGCTAG GTTTCCCGCTACCCG TERM 339 279251 - 279267 + T 91 -13.7 -2.64803 | overlap 279249 279248 CGCACGACGTGCGCT GCGCGCT GAA AGCGCGC TAGGTTTCCCGCTAC CBU_0313 280875 - 279376 - | Slt family transglycosylase CBU_0314 281785 - 281012 - | hydroxyacylglutathione hydrolase TERM 340 281203 - 281215 + g 71 -7.7 -3.85567 | CTTTTTGGCCAGTTT CAACG ATG CGTTG TTTAAGTTTGGGATT CBU_0315 281850 - 282581 + | putative methyltransferase TERM 341 282986 - 282974 - g 70 -6.9 -4.09685 | TGGCATTGGGTAAAA GGCCA TAG CGGCC ATGCCGAAAATGAAA CBU_0316 282596 - 283060 + | RNase H CBU_0316a 283271 - 283119 - | hypothetical cytosolic protein dnaQ 283478 - 284188 + | DNA polymerase III, epsilon chain enhA.2 284826 - 284182 - | ErfK/YbiS/YcfS/YnhG family protein TERM 342 284480 - 284468 - Gf 71 -4.7 -4.63184 | opp_overlap 284469, overlap 284469 AAGTTAGCGCAAAAA GCGGC ACC GCCGT TGGCTTTCCCCGAGG CBU_0319 284817 - 284933 + | hypothetical protein TERM 343 285904 - 285921 + Tr 77 -4.9 -4.96388 | TGAGTTCGTCTTGAG TAGCAGA AGAA TTTGCTA TTTTATTTAATAATT icmH 288708 - 287935 - | IcmH TERM 344 288458 - 288446 - G 74 -4.1 -5.01553 | AACGCACAAAGAAAA TAACG TGC CGCTA AAATGACGGGTGATC TERM 345 288643 - 288655 + g 71 -7.7 -3.76775 | opp_overlap 288643, overlap 288635 GATAGAGGCGTCAAA GACAC TGT GTGTC TTTCCGTCTCTTACA CBU_0322 288902 - 289774 + | hypothetical protein CBU_0323 289771 - 290022 + | putative acyl carrier protein TERM 346 291527 - 291505 - g 74 -5.6 -4.7254 | opp_overlap 291505 ATGCGTCAGTAAAAA TTTCGCGATT AAA ATTCACGAAA TAGTTTGCATTCGCG CBU_0324 290036 - 291682 + | acyl-CoA synthetase TERM 347 291688 - 291667 - T 84 -8 -4.82154 | opp_overlap 291662 291667, overlap 291658 AATTGAGATTAAAAA TCTCGGCC GCAAGT GACCGAGA TTTTCCCTTTTTGAA TERM 348 291667 - 291688 + T 77 -6.5 -4.4874 | opp_overlap 291658 291667, overlap 291662 AATTGAGATTAAAAA TCTCGGCCG CAAG TGACCGAGA TTTTCCCTTTTTGAA TERM 349 291743 - 291764 + T 77 -9.5 -3.53224 | gap 1, opp_overlap 291743, overlap 291725 CTAACGGCGACCAAA GGGGAGC-AT TGC ATGGCTCCCC TTTGGAAACCCCATC TERM 350 291764 - 291743 - T 79 -9.5 -3.74747 | gap 1, opp_overlap 291725 291743 CTAACGGCGACCAAA GGGGAGC-AT TGC ATGGCTCCCC TTTGGAAACCCCATC TERM 351 291787 - 291808 + T 100 -14.5 -4.91046 | ACCCCATCGCTTTTG TCTCTGGCG CAAG CGCCAGAGA TTTCTTTCTTTTGTG purD 293257 - 291944 - | phosphoribosylamine--glycine ligase TERM 352 292011 - 292021 + g 77 -3.2 -5.24416 | GTAATTAATTGGGCC GCTT GAT AGGC TTTTTGTTGTGCTTC TERM 353 292770 - 292783 + g 79 -6.7 -4.68103 | ACACCTTTTCCTGCC GCAAG ACCG CTTGC TTTTATTACAATTGG TERM 354 296555 - 296604 + H 90 -9.4 -4.41348 | opp_overlap 296568 296572, overlap 296557 296558 296587 CTGCACAAGATAATG CTTGC-GAAGGGAAGGGACGATGC GGCT GCATCG-CACTTTCCTTCTGCGTG TTTATTTGAAGGAGA TERM 355 296557 - 296602 + G 85 -10.6 -3.81557 | opp_overlap 296568 296572, overlap 296555 296558 296587 GCACAAGATAATGCT TGC-GAAGGGAAGGGACGATGC GGCT GCATCG-CACTTTCCTTCTGCG TGTTTATTTGAAGGA TERM 356 296558 - 296601 + G 80 -11.9 -2.88452 | opp_overlap 296568 296572, overlap 296557 296555 296587 CACAAGATAATGCTT GC-GAAGGGAAGGGACGATGC GGCT GCATCG-CACTTTCCTTCTGC GTGTTTATTTGAAGG TERM 357 297832 - 297850 + G 87 -8.8 -4.4715 | GTTATGATCATATCG GTAGCGCT ATT GGCGCTGC TTTTATCGCTTGGCA TERM 358 297975 - 297958 - g 74 -6.9 -4.37886 | opp_overlap 297958 297957, overlap 297959 TGATTGCTTATAAAA TTGCGGC CCAT GCCGCAG ATTTAGCAAAAGGAC TERM 359 297974 - 297959 - g 74 -10.4 -3.2241 | opp_overlap 297958 297957, overlap 297958 GATTGCTTATAAAAT TGCGGC CCAT GCCGCA GATTTAGCAAAAGGA thiC 296556 - 298220 + | thiamine biosynthesis protein CBU_0331 298220 - 299242 + | glycine oxidase ThiO thiS 299239 - 299442 + | ThiS thiG 299444 - 300223 + | thiazole synthase TERM 360 300844 - 300833 - g 70 -5.8 -4.37991 | overlap 300826 CAAAAATACCCAAAA CACG GGTG CGTG GGACGGGCTGCGCGT thiDE 300220 - 301659 + | thiamine-phosphate pyrophosphorylase/thiamine-phosphate pyrophosphorylase TERM 361 301986 - 301996 + G 72 -6.8 -4.15657 | ATGGTTTTGGATATC GACG AAA CGTC TTTATCTAATTATAG CBU_0335 301737 - 302402 + | putative acid phosphatase purH 304011 - 302428 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase fis 304303 - 303992 - | DNA-binding protein fis TERM 362 304229 - 304244 + g 74 -10.4 -3.22091 | opp_overlap 304226 GGACGCGAACGATTG GCCGGT TTCA ACCGGC TTAATAACTTCAGGT TERM 363 305186 - 305176 - g 70 -6.8 -4.03978 | opp_overlap 305176 AATCGGGTAGAGAAA TCGC CTT GCGA TTGTATTTAGAAAAA TERM 364 306797 - 306783 - g 76 -8.6 -3.8646 | opp_overlap 306785 306789, overlap 306774 306785 306786 TATCAACAATGGAAA GACCAA CCA TTGGTC GTCAACAAATGGTTG pepN 304467 - 307172 + | membrane alanine aminopeptidase CBU_0339 307955 - 307194 - | hypothetical membrane associated protein TERM 365 308611 - 308631 + G 76 -10.5 -3.28712 | opp_overlap 308627 CTTGCGGATGGATTT TCGGGTAGT GAA ACTACTCGA TTATGCAAAAAGCGA CBU_0340 308186 - 309124 + | hypothetical cytosolic protein pfkA 310164 - 309166 - | 6-phosphofructokinase TERM 366 309403 - 309419 + gF 100 -2.9 -5.95449 | overlap 309404 GCCGAGGACGCAGAC GCGGTAT TCG ATGCCGG TTTTTTCTTTTATTT CBU_0342 310148 - 310264 + | hypothetical protein TERM 367 310904 - 310923 + G 79 -2.8 -5.41143 | overlap 310893 GGGGGGAACTGTAGT TCCTTTGC GAAA GCAAGAGA TTTTTTTGAAACCTA TERM 368 311085 - 311075 - g 81 -2.4 -5.52079 | ACAGCAAAAGAAAAA GCGG TAA CTGC TGAAACCATTATGGG CBU_0343 310601 - 311482 + | hypothetical protein TERM 369 312432 - 312418 - T 71 -6.4 -4.23781 | opp_overlap 312420 312423 TGCATCAAAATTAAA TCCACC GCT GGTGAA ACCGCCGTGCTTTAA TERM 370 313015 - 313034 + T 74 -6.4 -4.42806 | opp_overlap 313015, overlap 313017 TGTCCCCCATAATAA TTGAACGC CCGT GCGTTCCA TTTCTTTGGCAATGA TERM 371 313499 - 313510 + T 95 -4.4 -5.82316 | opp_overlap 313499 ACTTCTGTTTATAAG CGTT TGCA AACG TTTTTTTTAGCTGCT xylB 314966 - 313482 - | xylulose kinase TERM 372 313920 - 313908 - G 74 -3.3 -5.0538 | CGTCATTCCAAAAAA CACCC CGC GGGCA TAAGGATCGTTATGC TERM 373 314250 - 314286 + g 100 -15.2 -4.59773 | gap 1, opp_overlap 314279 314280, overlap 314251 GACGCTAATAGCGCT TGCCG-CGTTATCGCCG CCGC CGGCGACAACGGCGGCG TTTTTGGGGATGCCA TERM 374 314251 - 314285 + g 100 -16.5 -3.35542 | gap 1, opp_overlap 314279 314280, overlap 314250 ACGCTAATAGCGCTT GCCG-CGTTATCGCCG CCGC CGGCGACAACGGCGGC GTTTTTGGGGATGCC TERM 375 314499 - 314515 + g 91 -2.3 -5.88061 | opp_overlap 314500, overlap 314500 314508 AAGTAATCGTAAATA ATCTTTT GGC AAAAGAA TTTTTTTGATTTTTT CBU_0347 316362 - 314971 - | D-xylose-proton symporter TERM 376 315123 - 315109 - G 91 -2.1 -5.88476 | gap 1 AAAATAAATAAAAAA GGTACC GCTA GG-ACC AAGATATTCGATCAA TERM 377 316166 - 316149 - G 72 -5.5 -4.57341 | overlap 316163 AATGGCCGCTAAAAA GCGCTCC CAAA AAAGCGC CGATGAGTACGGCAC TERM 378 316181 - 316163 - G 77 -5.2 -5.00884 | overlap 316149 AGCGCTCCCAAAAAA GCGCCG ATGAGTA CGGCAC TGACAACAAATCCAT gph 317086 - 316403 - | phosphoglycolate phosphatase ubiG 317783 - 317079 - | 3-demethylubiquinone-9 3-methyltransferase CBU_0351 318123 - 317770 - | Hpt domain-containing protein czcD.1 319062 - 318169 - | cation efflux system protein CzcD TERM 379 318205 - 318221 + g 74 -10.9 -2.67143 | overlap 318202 ACATTCTTCATTATC CGCTTCA GGC TGAAGCG TAATATGATCAATAT CBU_0353 320215 - 319199 - | putative periplasmic protease TERM 380 320354 - 320375 + H 71 -5.1 -4.4891 | overlap 320355 TTCCTTCCCTTCCTC CTTGCTGCT GGCC GGCAGCAAC TTTTATCGTACTAAA TERM 381 320355 - 320374 + H 70 -8.6 -3.28864 | overlap 320354 TCCTTCCCTTCCTCC TTGCTGCT GGCC GGCAGCAA CTTTTATCGTACTAA TERM 382 321887 - 321901 + G 70 -2.8 -5.00467 | overlap 321873 CGGGAACCACCTAAT TCCC TTTGGTT GGGA TTTTATTGTTATTGC CBU_0354 320424 - 322001 + | amino acid permease TERM 383 323918 - 323904 - f 79 -10 -3.53444 | overlap 323900 CTTTTGAAGAACTAA TGCTCG AAA CGAGCA TAGAAGAAATAAAGC TERM 384 324148 - 324132 - g 86 -13.7 -2.52896 | opp_overlap 324114 324113 324144 GCAGGCGGGAATCCA GCGCGCT TTT AGCGCGC TGCGCACACAGTGCG CBU_0357 324094 - 324321 + | hypothetical protein TERM 385 325783 - 325799 + T 72 -3.1 -5.05301 | opp_overlap 325795, overlap 325795 CCATCAGAAGTGCAA TTTTTAT AAA ATGAAAA TTTTTCTAATTGTTT TERM 386 325836 - 325819 - T 71 -7 -4.11484 | opp_overlap 325819, overlap 325831 TCTAATTGTTTAAAA CGATGC AAATAA GCATCG TATGCTCGAAGAGCT CBU_0362 328273 - 327068 - | amidohydrolase TERM 387 327692 - 327702 + g 79 -6.8 -4.70319 | overlap 327687 AGGACGATGTCCATG GCCA CCT TGGC TTTTAATTTTGATGA TERM 388 329360 - 329381 + r 73 -7.3 -4.05788 | opp_overlap 329358, overlap 329372 AACAACAATACTACT GGGGTTTTT CCAG AGAGACCCC TTTCATTTCAGGCAC CBU_0364 330686 - 329355 - | phosphate transporter TERM 389 329721 - 329734 + g 71 -3.8 -4.74132 | opp_overlap 329721 CATCATGACAAAACC CGCT ATTTGA AGCG TTTTTCGTCCAATCT TERM 390 330073 - 330057 - G 74 -3.6 -5.06414 | opp_overlap 330057 330059, overlap 330059 TTTGTTTAATAAAAA TCGCGG CGTTT CCGCTA TTCTTCTTCGTAAAT CBU_0365 330772 - 330864 + | hypothetical protein phoR 331619 - 330861 - | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain/His kinase A (phosphoacceptor) domain protein phoB 332346 - 331600 - | phosphate regulon transcriptional regulatory protein PhoB TERM 391 333125 - 333136 + G 72 -5.8 -4.45738 | CTGACAATCCTTTTC CAGG CTCT CCTG TTTATTCTTACGGTC TERM 392 333310 - 333296 - g 70 -7.1 -3.88182 | opp_overlap 333296 333295 GCAATGAAAAACGAA GCGAC ATGGA GTCGC CTATTCTCCAAAGTT CBU_0368 332398 - 333582 + | glucose/sorbosone dehydrogenase CBU_0369 333689 - 333585 - | hypothetical protein TERM 393 333679 - 333698 + g 100 -11.4 -5.38054 | opp_overlap 333665 333679 ACCACGAAATAAAAA TCCCCGGG CAAA CCTGGGGA TTTTTATTTATGCAG TERM 394 333698 - 333679 - G 100 -9.2 -5.34309 | opp_overlap 333679, overlap 333665 ACCACGAAATAAAAA TCCCCGGG CAAA CCTGGGGA TTTTTATTTATGCAG CBU_0370 333980 - 333753 - | putative surface antigen CBU_0371 335245 - 334052 - | multidrug resistance transporter, Bcr family TERM 395 335273 - 335285 + r 91 -7.7 -5.1925 | overlap 335271 335277 TAGTTCTTGCTCCCC TCCCT GGA AGGGA TTTTTTCCATTGTAA CBU_0372 336712 - 335348 - | Fic family protein CBU_0373 337383 - 336859 - | MaoC domain-containing protein TERM 396 336979 - 336995 + g 81 -2.2 -5.47218 | overlap 336983 CGTTTCCACCACAAC GATTCC CTGAT GGGGTC TTTTTTTCGATAAGC TERM 397 337974 - 337958 - H 73 -6.7 -4.1552 | TATGTCGGGAATAAA TTTTAAC GCA GTTAAAA ATTGCAAGTCGACAA TERM 398 339952 - 339934 - g 100 -6 -5.48825 | GATTATCGAAAAAAA TCTCGAAC AGC GTTTGAGA GCTGTCAACGAAGAA CBU_0377 339869 - 340090 + | hypothetical protein CBU_0378 340247 - 340669 + | putative lipoprotein ampD 341457 - 340684 - | anhydro-N-acetylmuramyl-tripeptide amidase CBU_0380 341599 - 341474 - | hypothetical protein grpB 341677 - 342240 + | glutamate-rich protein TERM 399 342296 - 342241 - T 95 -14 -3.54408 | opp_overlap 342246 342248, overlap 342238 342242 CGTGATCTAAAGTAA TTCGACAGCCCGTAGGTTGGGCTGAG CTTG CGAAGCCCAACCTACGGGCTATTTAG GAGGTATGCAGGGAG TERM 400 342295 - 342242 - T 100 -17.5 -2.72324 | opp_overlap 342246 342248, overlap 342238 342241 GTGATCTAAAGTAAT TCGACAGCCCGTAGGTTGGGCTGAG CTTG CGAAGCCCAACCTACGGGCTATTTA GGAGGTATGCAGGGA TERM 401 342246 - 342291 + T 100 -20.5 -3.56643 | opp_overlap 342238 342242 342241, overlap 342248 TCTAAAGTAATTCGA CAGCCCGTAGGTTGGGCTGAG CTTG CGAAGCCCAACCTACGGGCTA TTTAGGAGGTATGCA TERM 402 342248 - 342289 + T 100 -23.1 -3.36073 | opp_overlap 342238 342242 342241, overlap 342246 TAAAGTAATTCGACA GCCCGTAGGTTGGGCTGAG CTTG CGAAGCCCAACCTACGGGC TATTTAGGAGGTATG ispB 344022 - 343024 - | polyprenyl synthetase family protein tag 344088 - 344726 + | DNA-3-methyladenine glycosylase I TERM 403 344845 - 344880 + F 100 -9.2 -5.54192 | gap 1, opp_overlap 344845, overlap 344848 CTTCAGGTAATGGAA GATCTACTCAGGTAAAG GGA TTTTACCTGAG-GGGTC TTTTTTTAACTTCGT TERM 404 344848 - 344878 + F 90 -9.8 -4.40173 | opp_overlap 344845, overlap 344845 CAGGTAATGGAAGAT CTACTCAGGTAAAG GGA TTTTACCTGAGGGG TCTTTTTTTAACTTC TERM 405 345998 - 345984 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 406 346060 - 346040 - g 71 -2.4 -5.10461 | opp_overlap 346041, overlap 346041 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_0384 345003 - 346097 + | IS1111A transposase CBU_0384a 346366 - 346094 - | hypothetical protein TERM 407 346377 - 346434 + H 100 -16.8 -3.1505 | gap 3, opp_overlap 346382 346388 346398, overlap 346382 TCCATATACGTATGA GCGAAGCGAAATACGGGAAAACAAT-GAT GTC ATCTATTGTC--CCCGTATTTCGCTTCGC TTCATACGGGCTACT TERM 408 346429 - 346382 - H 83 -11.7 -3.10343 | gap 2, opp_overlap 346377 346382, overlap 346388 346398 ATACGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATTGTCCCCGTATTTCGC TTCGCTTCATACGGG CBU_0384b 346413 - 346598 + | hypothetical protein rplU 346685 - 347038 + | LSU ribosomal protein L21P rpmA 347028 - 347300 + | 50S ribosomal protein L27 obgE 347465 - 348484 + | GTPase ObgE TERM 409 349946 - 349962 + G 79 -6.6 -4.63486 | opp_overlap 349941 349945 GAATTTGAAATTGAT TTCACC AACCC GGTGAA TTTTATTCGCAGCCT TERM 410 352140 - 352110 - g 100 -12.7 -4.14739 | TTATGTATGCCAAAA TCTGCGTTCACTT CGATC AAGGGAACGCAGA AACTCTCGAAGTTGA CBU_0388 348584 - 352762 + | hypothetical protein rpsT 353040 - 352768 - | SSU ribosomal protein S20P TERM 411 353389 - 353399 + G 72 -6.8 -4.17491 | GCCATTATCTTTGGA GCAG GGC CTGC TTTTGACGCTTTCGT TERM 412 354242 - 354262 + G 87 -5.3 -5.45802 | TGGCGATGTTAATCG GTGTTCCGG CGG CCGTGGCAC TTTTTATTTTAGCGG mviN 353284 - 354831 + | virulence factor TERM 413 354852 - 354877 + G 77 -4.7 -5.13741 | overlap 354853 ATTATTCGGTTAGCC TGTGGTCCTTT TTCT GAAGGATCGCG TTTTTGTTCACTTCA ribF 354828 - 355865 + | FMN adenylyltransferase TERM 414 357474 - 357484 + T 72 -3.2 -5.09426 | ATCAATACTTCTAAG GCTT TTA AGGC TTTTTTACCATTAGG TERM 415 357544 - 357530 - T 76 -3.5 -5.28683 | AGTAATACGAAAAAA GACAG TATCG CCGTC TTCAATTTGCGATAA CBU_0394 357947 - 357828 - | hypothetical protein CBU_0395 358040 - 358726 + | putative lipoprotein ileS 358839 - 361649 + | isoleucyl-tRNA synthetase lspA 361652 - 362149 + | lipoprotein signal peptidase CBU_0398 362161 - 362709 + | hypothetical membrane spanning protein CBU_0400 362731 - 363210 + | hypothetical protein TERM 416 363220 - 363231 + G 72 -5.8 -4.56133 | AAATGAAGTCCAGAG TGGG TGAC CCCA TTTTCATTCTTGGCG CBU_0400a 363207 - 363356 + | hypothetical protein CBU_0402 363394 - 363501 + | acetyltransferase family protein CBU_0403 363498 - 363635 + | acetyltransferase family protein TERM 417 364029 - 364041 + T 70 -7.7 -3.62096 | TTAAAGTTTATGCTG GCGTT GTC AACGC TTTAGCCTCATGCCC CBU_0407 365301 - 365200 - | hypothetical protein TERM 418 365246 - 365231 - G 81 -3.4 -5.33405 | overlap 365238 TTGATCAAATAAAAA TAAATA ATGA TATTTA TCAGCGTCAAAGCAA CBU_0409 365958 - 365803 - | hypothetical protein CBU_0410 367970 - 366234 - | hypothetical membrane spanning protein TERM 419 368208 - 368198 - g 77 -3.2 -5.26158 | GAAATAAAAAAGAAA CGAG ATT CTCA TTATTATATAAAAAA CBU_0411 368162 - 368257 + | hypothetical protein pilE 368795 - 368385 - | type IV pilin CBU_0415 370990 - 370484 - | guanine deaminase TERM 420 371450 - 371482 + G 86 -7.6 -5.09426 | gap 1, overlap 371452 GCAGCGCACGAAGTG CGCTG-GGTCCCCGC CTAC GCGGGGACGACGGGG TTTTTTGAAATTAAG CBU_0416 371308 - 371490 + | hypothetical protein TERM 421 371596 - 371580 - g 86 -13.7 -2.52896 | opp_overlap 371562 371561 GCAGGCGGGAATCCA GCGCGCT TTT AGCGCGC AGCGCACGGTGTGCG CBU_0417 371542 - 371679 + | hypothetical protein CBU_0418 372573 - 371728 - | putative branched-chain amino acid aminotransferase CBU_0419 373506 - 372676 - | polysaccharide deacetylase family protein TERM 422 373497 - 373487 - G 100 -8.2 -5.54885 | opp_overlap 373494 AAGAGGAAGAAAAAA CGCC CCT GGCG GCATTTCATAAAATA panD 375681 - 375346 - | aspartate 1-decarboxylase panC 376448 - 375675 - | pantoate--beta-alanine ligase TERM 423 375740 - 375752 + g 77 -10.5 -3.49851 | overlap 375733 CTCCCACGTGAACCG CGGCG AAA CGCCG TTCGTTATAATCTTC TERM 424 375980 - 375966 - G 80 -5.7 -5.10461 | opp_overlap 375966, overlap 375960 GGTATCTAAGAAAAA GGCTT CCGCT AAGCC TTTTACCAATTGTAA panB 377259 - 376459 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 425 377014 - 377002 - G 74 -6.9 -4.33274 | TCGATAGGAGCAAAA CGGCA TAT CGCCG ATAATAAATTTATTG CBU_0425 378718 - 377351 - | hypothetical protein TERM 426 377378 - 377396 + g 73 -5.3 -4.64334 | gap 1, overlap 377378 GCTGGGCCCTTTACT GG-CGAAC TTTT GTTCGACC TTTTCTTCAGGGGTT TERM 427 377736 - 377722 - G 70 -5.8 -4.35581 | TCAAAAGAGGCAAAA TTCTTA TCA TAAGAA AATGAGTTAAAAATA TERM 428 377886 - 377904 + g 73 -3 -5.05153 | opp_overlap 377886 377889, overlap 377889 ATATCTTGCACAAAC TCACCCCA TAA TGAGGGGA TTTCTTTTTTCAGAT CBU_0426 380905 - 378965 - | amino acid permease TERM 429 379856 - 379838 - GH 79 -3.8 -5.18297 | CAATAATAAACAAAA CACGATCG AAC CGATAATG GCGAGTGGAATTGCT CBU_0426a 380654 - 380740 + | hypothetical protein TERM 430 381320 - 381292 - fH 76 -4.5 -5.04987 | opp_overlap 381292 381296, overlap 381295 381296 AACAGCTTGAAAAAA CAATCGCAGAAAT GGA ATTTCAGCGTATG TTTTCCGGTGAAATG TERM 431 381317 - 381295 - fH 71 -4.8 -4.62085 | opp_overlap 381292 381296, overlap 381292 381296 AGCTTGAAAAAACAA TCGCAGAAAT GGA ATTTCAGCGT ATGTTTTCCGGTGAA TERM 432 381316 - 381296 - fH 70 -8.3 -3.36166 | opp_overlap 381296 381292, overlap 381295 381292 GCTTGAAAAAACAAT CGCAGAAAT GGA ATTTCAGCG TATGTTTTCCGGTGA TERM 433 381296 - 381316 + FH 70 -8.3 -3.41366 | opp_overlap 381295 381292 381296, overlap 381292 GCTTGAAAAAACAAT CGCAGAAAT GGA ATTTCAGCG TATGTTTTCCGGTGA TERM 434 381751 - 381732 - fH 77 -10.7 -2.80796 | opp_overlap 381724, overlap 381731 GGGCAGCACGTAAAC CGGACGG ATTCGG CCGTCCG CATCACGCATTTGCC TERM 435 381897 - 381885 - fH 70 -3.3 -4.94672 | overlap 381888 AAACAACAGGAAAAA CAAGC TTT GCTAG AAGCCTCTAAATCCG CBU_0429 382066 - 382461 + | hypothetical protein TERM 436 382498 - 382509 + F 74 -4.4 -4.8622 | ATACGGGCTACCTGT TGGA AACC TCCA TTTTTAATTGCACCC TERM 437 383733 - 383723 - g 76 -5.4 -4.77567 | ACTCGTAGAAGAAAA GTTG CAA CAAC CAATTTTTATAACTC lysS 382593 - 384089 + | lysyl-tRNA synthetase CBU_0431 384834 - 384058 - | glycine cleavage T-protein (aminomethyl transferase) domain protein TERM 438 384665 - 384641 - G 79 -8.1 -4.42047 | opp_overlap 384647, overlap 384643 AGTAAAAAATAATAA TCTTTGTTTTT TTG AAAAACAAAAA AATTCGCTACCATCC CBU_0432 384941 - 386227 + | transporter, MFS superfamily CBU_0433 386294 - 386815 + | transporter, small conductance mechanosensitive ion channel (MscS) family TERM 439 386875 - 386855 - T 85 -11.2 -3.37464 | opp_overlap 386848, overlap 386830 CGATTAAGGCTATAA TCTCCGCA AAAGG TGCGGAGA TTAAGATACCTTCGC CBU_0434 387034 - 386915 - | hypothetical cytosolic protein TERM 440 387086 - 387052 - R 100 -14.4 -4.36931 | opp_overlap 387049 387064 GAATCCAGACTAAAA GGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGATCC TERM 441 387064 - 387074 + r 76 -4.6 -5.06414 | opp_overlap 387052, overlap 387049 AAAGGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC CBU_0434a 387351 - 387133 - | hypothetical protein CBU_0436 388751 - 387975 - | hypothetical membrane spanning protein TERM 442 388238 - 388248 + g 71 -4.6 -4.62622 | GCTCCGCTAGTGATG GCCT ATA GGGC TTTATTTCTAATTGA TERM 443 388952 - 388968 + H 72 -9.5 -3.01712 | overlap 388954 GCATAGTAGTTAGTT GAGTCAA TTT TTGACTC TCTTAAGGAGGAGAG CBU_0439 389576 - 389710 + | hypothetical protein CBU_0440 389688 - 389885 + | hypothetical protein ogt 390500 - 389985 - | methylated-DNA-[protein]-cysteine S-methyltransferase rplS 390853 - 390506 - | 50S ribosomal protein L19 TERM 444 390729 - 390748 + g 70 -5.6 -4.38472 | opp_overlap 390712 390725, overlap 390717 390730 ACGCCTTCAAAGGCT TGCAGCCG TTCA CGGTTGCC TTCTTTTACTTTCAC TERM 445 390730 - 390747 + g 70 -9.1 -3.21998 | opp_overlap 390725, overlap 390717 390729 CGCCTTCAAAGGCTT GCAGCCG TTCA CGGTTGC CTTCTTTTACTTTCA trmD 391590 - 390850 - | tRNA (Guanine-N(1)-)-methyltransferase rimM 392098 - 391592 - | 16S rRNA-processing protein TERM 446 392069 - 392040 - G 71 -9.9 -3.06302 | ACGACTTTTATCCAA CCGCGCAGTCCGT AGGG ACGGGCTAAGCGG CCGATGATGACTTTG TERM 447 392128 - 392173 + r 100 -11.2 -5.40014 | overlap 392130 TGCAATGGATTGCCT TATCTTTGTCATCCTGCCGC TTGTCC GCGGCGGGATGAGAGAGGCA TTTTTATTCTTCTTT TERM 448 392130 - 392171 + r 91 -13.8 -2.85769 | overlap 392128 CAATGGATTGCCTTA TCTTTGTCATCCTGCCGC TTGTCC GCGGCGGGATGAGAGAGG CATTTTTATTCTTCT rpsP 392722 - 392177 - | SSU ribosomal protein S16P TERM 449 392253 - 392263 + g 71 -4.6 -4.69559 | GCTTTGGGCTCTTCA GTCG CTA CGGC TTTCTTTTGAGCTTT TERM 450 393520 - 393507 - g 83 -3.8 -5.34555 | opp_overlap 393508, overlap 393508 TGACAGTATAAAAAA CTGG CTGGCC CCAG ACACGTTTTTTAGCA CBU_0446 393037 - 393747 + | hypothetical protein CBU_0447 394394 - 393840 - | ankyrin repeat-containing protein CBU_0448 394433 - 394528 + | hypothetical protein ffh 396936 - 395551 - | signal recognition particle, subunit FFH/SRP54 TERM 451 396485 - 396465 - G 93 -5.4 -5.47218 | GTGTAGGGAAAAAAA TAGCGTTG ATTTG CGACGCTA AAGTTTCTAATTGTT TERM 452 397250 - 397236 - g 74 -3.6 -5.09895 | overlap 397238 TATCCATGGAAAAAA TAGTTT TTA AAACCA TTGCCGTCGGGTTTT CBU_0451 396962 - 397510 + | cytochrome C assembly protein corB 397507 - 398760 + | transporter, HlyC/CorC (HCC) family TERM 453 398847 - 398863 + G 76 -6.5 -4.56597 | TTATTTCCCTTGCAG TGCCTGC TTG GCAGACA TTTTTGGCCCAAGAG TERM 454 399323 - 399277 - g 70 -5.9 -4.41348 | gap 1, overlap 399278 399279 TTTTTGTGAAACAAA TTTTGAG-TCCGTCATTCCCGC TTGC GCCGGAATGACGGAACTATAGA GTCAAATTAGATGCC fimT 398762 - 399322 + | putative fimT protein adk 399357 - 400052 + | adenylate kinase CBU_0455 400086 - 400451 + | thioredoxin TERM 455 400462 - 400434 - T 100 -14 -4.98857 | opp_overlap 400440, overlap 400440 AGGGAAGCACAAAAA CAAAAAGCCCGC GAATA ACGGGCTTTTTG AATCGGCCTAAGCAC TERM 456 400456 - 400440 - T 100 -7.2 -5.69262 | opp_overlap 400440, overlap 400434 GCACAAAAACAAAAA GCCCGC GAATA ACGGGC TTTTTGAATCGGCCT TERM 457 400440 - 400456 + T 80 -6.5 -4.66163 | opp_overlap 400440 400434 GCACAAAAACAAAAA GCCCG CGAATAA CGGGC TTTTTGAATCGGCCT TERM 458 400490 - 400509 + T 90 -11.4 -3.79747 | opp_overlap 400477 CACTACGCTTTTTTG CGTGGACG ACCG CGTCCGCG TTTCATCGTAGATAC CBU_0456 400830 - 400477 - | putative DNA-binding protein CBU_0457 401095 - 400976 - | hypothetical protein CBU_0458 401121 - 401522 + | hypothetical protein TERM 459 402285 - 402317 + G 80 -9.1 -4.12532 | TTGGCGCTTTTATCG CTGGAGTCAGTCTCG CAT CGAGGCCGGTTTCAG TTTATATATCCGAGA rosB 401501 - 402721 + | transporter, monovalent cation:proton antiporter-2 (CPA2) family ampE 402797 - 403573 + | beta-lactamase induction protein TERM 460 403959 - 403970 + G 70 -5.8 -4.44046 | overlap 403958 403965 TCTTTCCAGTTACGC GTCG ATGG CGAC TTTATTTGAAGTCGG aceE 403618 - 406272 + | pyruvate dehydrogenase subunit E1 pdhC 406338 - 407648 + | dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex lpdA 407661 - 409085 + | dihydrolipoyl dehydrogenase, E3 component of pyruvate dehydrogenases complex CBU_0465 409709 - 409804 + | hypothetical protein TERM 461 409976 - 410015 + F 79 -11.6 -2.64616 | gap 1, opp_overlap 409977, overlap 409990 GGGAATCTCGGCTAA AGGG-CTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGGCCCC TAATCTGGGTCCCCC TERM 462 410013 - 409977 - f 82 -10.9 -3.54459 | opp_overlap 409976 409990 GGAATCTCGGCTAAA GGGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGGCC CCTAATCTGGGTCCC TERM 463 409990 - 410000 + F 76 -4.6 -5.06414 | opp_overlap 409977, overlap 409976 AAGGGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGGCCCC TERM 464 410299 - 410283 - f 84 -2.1 -5.85737 | overlap 410286 AGACGAAGAAAAAAA CAACCCA GAA TGGGAAG ACTTATATCAAGGTT TERM 465 410296 - 410286 - f 84 -6.8 -4.96435 | overlap 410283 CGAAGAAAAAAACAA CCCA GAA TGGG AAGACTTATATCAAG bioC.1 410379 - 411227 + | putative methyltransferase xseB 411476 - 411228 - | exodeoxyribonuclease VII small subunit TERM 466 411440 - 411453 + g 71 -5.3 -4.57275 | overlap 411448 411449 ATTCATTCAACGAGG CTTCA AAGT TGAAG TTTTCAGTTTTTTTA TERM 467 411448 - 411460 + g 79 -2.7 -5.40072 | overlap 411440 411449 AACGAGGCTTCAAAG TTGAA GTT TTCAG TTTTTTTACGAGGCA CBU_0469 411692 - 411489 - | hypothetical protein CBU_0470 412395 - 411739 - | putative phosphoribosyl transferase TERM 468 413001 - 412981 - H 78 -2.6 -5.4756 | overlap 412982 AATTTGAAGAAAAAA CTCCTTCT AATAA AAAAGGAA ATAGGTCATAAAATG TERM 469 414034 - 414018 - H 71 -5.1 -4.62471 | overlap 414013 AACCCACATACAAAA TGCTTTG AGT CAAGGCA AAAAACCCGCTGCGA recQ 414286 - 416091 + | ATP-dependent DNA helicase CBU_0473 416156 - 416545 + | DNA-binding protein BpH2 CBU_0474 416557 - 416805 + | hypothetical protein TERM 470 416858 - 416837 - f 93 -8.7 -5.20328 | TTTTAAAAAAAGAAA TCTTTGGCG CTTG CGCCAGAGA CAGGAGCGATGAAGT TERM 471 416958 - 416979 + F 72 -4.3 -4.67011 | opp_overlap 416958, overlap 416975 TCAAAAAGGGAAAAA TCTCGGCCG CAAG CGACCCAGA TTTTTAAATCAGGTT TERM 472 416979 - 416958 - f 82 -6.5 -4.92239 | opp_overlap 416958 416975 TCAAAAAGGGAAAAA TCTCGGCCG CAAG CGACCCAGA TTTTTAAATCAGGTT TERM 473 417041 - 417029 - f 71 -6.9 -4.04206 | GCAGCGGGAGAGAAA GGCAG CAG CCGCC TCTCCCGACATTGAG CBU_0476 417287 - 419029 + | hypothetical protein CBU_0477 419317 - 419039 - | hypothetical protein CBU_0478 419337 - 419435 + | hypothetical protein CBU_0478a 419555 - 419725 + | conserved cytosolic protein TERM 474 420173 - 420186 + G 73 -5.2 -4.72007 | AGTCGTTTTAAACCG GCGC AATTAC GCGC TTTATTTTAGTCACG TERM 475 420197 - 420223 + G 74 -9.4 -3.34102 | overlap 420194 CGCGCTTTATTTTAG TCACGCTCCCAT TCC GTGGGGCCGTGA TACTTTTTCTGATAA kdsB 419715 - 420476 + | 3-deoxy-manno-octulosonate cytidylyltransferase argR 420939 - 420460 - | arginine repressor TERM 476 421634 - 421615 - g 73 -5 -4.64598 | opp_overlap 421619 GAATTAGCGCAAAAA GGAATGAC CATC GTCATTGC TACGCATGAGATGAA TERM 477 421735 - 421760 + G 90 -9.1 -4.68384 | GAAGTAATGTTCCGT TCGCCAAAGAC TCAG GTTTTTGGTGA TTTTATTGCATCGGT artP 421033 - 421785 + | arginine ABC transporter ATP-binding protein CBU_0482 421789 - 422598 + | arginine ABC transporter periplasmic arginine-binding protein TERM 478 422987 - 422997 + G 70 -5.4 -4.40561 | overlap 422983 AAAAGCGATGGGCCT TCCA GGC TGGA TTATTTTTAAAAGAA artQ 422598 - 423263 + | arginine ABC transporter permease artM 423260 - 423931 + | arginine transport system permease protein TERM 479 423975 - 423988 + G 70 -6.7 -4.06419 | TTAATACTGATGACG GGGAA TTAC TTCCC TTATTTATAAAAAAA TERM 480 425216 - 425228 + G 80 -9.1 -4.05446 | GTTCTTCATAACTTT CCCAC AGC GTGGG TTTATAATTGGCCCC CBU_0485 423944 - 425560 + | hypothetical membrane spanning protein TERM 481 425590 - 425611 + T 83 -3.6 -5.63517 | opp_overlap 425590 ACTAGGAAATAAAAA TCCCCGAG ACTTGC CCTGGGGA TTTTTTATTTACCGA TERM 482 425611 - 425590 - T 80 -4.4 -5.34309 | gap 1, opp_overlap 425590 ACTAGGAAATAAAAA TCCCC-GAG ACTTG CCCTGGGGA TTTTTTATTTACCGA CBU_0486 427782 - 425620 - | ribonuclease TERM 483 426369 - 426417 + g 77 -5.3 -4.90266 | opp_overlap 426369, overlap 426370 ATTGATTGGGAACGA TGGTAATTTTTACCGGGTAATGG TGT TCAATGCCCCGTAATAATTCCCG TTTTTCATTAATGAG TERM 484 426661 - 426635 - G 84 -9.4 -4.17556 | overlap 426640 GACATTTCCAACAAA CCAAATCGGGAG ATA CGCCCAATCTGG ATACGAGCTCGGTCT TERM 485 426931 - 426917 - G 74 -7.8 -4.12296 | TCGATAATTAAAGAA CCTCCC GAA GGAAGG CGAATCTCACGTTGG rluC 428111 - 429037 + | ribosomal large subunit pseudouridine synthase C CBU_0488 429066 - 429773 + | Ser/Thr protein phosphatase family protein CBU_0489 430899 - 429865 - | phospholipase A1 CBU_0490 432739 - 430955 - | DNA polymerase X family/PHP domain-containing protein rpmF 432883 - 433077 + | 50S ribosomal protein L32 plsX 433085 - 434116 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 486 434200 - 434189 - g 80 -4.4 -5.29782 | overlap 434198 CAGATTTAGAAAAAA TGGT TAAT ACCA CGGATGAGTGGATCA TERM 487 434331 - 434313 - g 70 -9.5 -2.85056 | opp_overlap 434313 434312, overlap 434312 ACGTGCAATTGAAAT GGCGGGA ATAGA CCCCGCC GTTATCGACATGATT TERM 488 434452 - 434474 + G 72 -8.4 -3.61764 | opp_overlap 434448, overlap 434448 TTTGACATAAATGCG GCGTGCGCAG GTT TTGTGTACGC TTTAAGCATTGCTGA fabH 434113 - 435072 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 489 435754 - 435744 - g 79 -6.8 -4.63542 | CAGAAGGCGCAAAAA TCGC GAA GCGA ATTCCGGTCAGTGTC fabD 435173 - 436114 + | malonyl-CoA-[acyl-carrier-protein] transacylase TERM 490 436157 - 436138 - f 75 -10 -3.24232 | overlap 436136 CTTCGCCCAAAGATA CCCTCTCC TTGA GGAGAGAG CGGGGTGAGAAGTAA TERM 491 436233 - 436215 - g 70 -3 -4.98531 | opp_overlap 436216 436217, overlap 436216 TGCTCAAAGGAAAAA CCGCCC TCGTAAC GGGCGC TTCTCGGGGCATCGG fabG 436190 - 436939 + | 3-oxoacyl-[acyl-carrier protein] reductase TERM 492 436951 - 436969 + F 70 -9 -3.16742 | opp_overlap 436950 436953, overlap 436942 ATAGCGCTTGAATAC TAGTAACA ACA TGTTACTA TTGGTCGAAGTTAAC acpP 437007 - 437261 + | acyl carrier protein TERM 493 438523 - 438539 + G 73 -5.1 -4.67011 | TGGCACTAACGGAAC CTTGGTT TTA AGCCGAG TTTTTGACTAAACTT fabF 437306 - 438550 + | 3-oxoacyl-[acyl-carrier-protein] synthase 2 TERM 494 439038 - 439049 + G 87 -5.8 -5.40072 | opp_overlap 439033, overlap 439033 439032 GTTGCACCAACCTTC GTCC CGAG GGAC TTTTTTTCCCCGACA TERM 495 439258 - 439275 + G 71 -8.4 -3.53091 | GCGTCCTAAAATCGC CGGCGT TATTTT ACGCCG TTTAAAAAAAGGAAT CBU_0498 438560 - 439672 + | hypothetical protein tmk 439768 - 440253 + | thymidylate kinase TERM 496 440702 - 440686 - g 70 -10.1 -2.5194 | overlap 440685 TAATCAGTCATCAAC CGGGAGC CTT ACTCCCG ACGATCCTCAGCCGC TERM 497 441116 - 441106 - g 73 -2.6 -5.07652 | TGCCGCAAAATAAAA TAAT GCT ATTA TTACAAGAATTACAA holB 440250 - 441209 + | DNA polymerase III, delta' subunit TERM 498 441304 - 441267 - g 100 -23.6 -4.13014 | gap 1, opp_overlap 441259, overlap 441270 TTGAGACTTTTAAAA GCA-CGTCGTCCCGCGG TCAAG CCGCGGGACGACGATGC CAAAATTAAAATTGC TERM 499 441300 - 441270 - g 100 -24.1 -3.09272 | opp_overlap 441259, overlap 441267 AGACTTTTAAAAGCA CGTCGTCCCGCGG TCAAG CCGCGGGACGACG ATGCCAAAATTAAAA CBU_0501 441228 - 441353 + | hypothetical protein CBU_0502 441373 - 442140 + | hydrolase, TatD family TERM 500 442235 - 442192 - T 72 -9.8 -3.09516 | gap 1, opp_overlap 442192 GCCCGTATGAGCGAA GCGAAATACGGGAAATGAT GCCATCT ATCGTC-CCCGTATTTCGC TTCGCTCATACGGGC TERM 501 442192 - 442235 + T 75 -10.5 -3.09516 | gap 1, opp_overlap 442192 GCCCGTATGAGCGAA GCGAAATACGGGAAATGATG CCATC TATCGTC-CCCGTATTTCGC TTCGCTCATACGGGC TERM 502 442282 - 442296 + T 70 -8.5 -3.42574 | GCACCCTCCTGCTGC CGCGG TCGTC CCGCG TTCTACTAGAATTGC glnA 443404 - 442325 - | glutamine synthetase TERM 503 442996 - 442983 - G 76 -3.7 -5.06816 | ATGCCGCAATAAAAA GGGCC TTGA GGCGC GGGATATCCTCGATC TERM 504 443486 - 443524 + r 100 -17.6 -3.38272 | opp_overlap 443495, overlap 443487 TCATTTCGCCTGCGC GGGGATAAAGGGCTTTAA GTT TTTTAGCCCTTTATCCCC TTGTGGGTCATGATA CBU_0504 445045 - 443567 - | di-/tripeptide transporter TERM 505 444841 - 444821 - G 75 -4.5 -5.00616 | overlap 444822 444823 TCGGTCGGCAAAAAA TCCGCCCGC AAG GGGGGCGAT ATAAACTAAAGCAGT TERM 506 445088 - 445138 + r 73 -8.5 -3.65827 | gap 2, opp_overlap 445088 445106 ACGGGTGCATTGAAA GTATAGGTTTTC-AAGCT-ACTCGG CCC CCGAGGCGGCTTAGGTAACCTATAC TTTCAATCGCCCTTG CBU_0505 445782 - 445165 - | acetyltransferase CBU_0505a 446054 - 446164 + | hypothetical protein recJ 446222 - 447946 + | single-stranded-DNA-specific exonuclease CBU_0507 449058 - 448018 - | hypothetical cytosolic protein TERM 507 448315 - 448327 + g 76 -4.1 -5.09245 | CCGTTCGATGGTACT GATGT AAG GCATC TTTTTCTCCTTTTCC CBU_0508 449980 - 449267 - | hypothetical membrane spanning protein TERM 508 449854 - 449826 - G 77 -10.4 -3.5393 | opp_overlap 449815 449816 449829, overlap 449829 ATTAGCTCTTCCAAA GAAGCGTTTGAA TACGC TTCAAGCGCTTC TCTAAGAAATGCAGA TERM 509 449829 - 449851 + g 71 -8.5 -3.48924 | opp_overlap 449829 449826, overlap 449815 449816 AGCTCTTCCAAAGAA GCGTTTGAA TACGC TTCAAGCGC TTCTCTAAGAAATGC trpR 450030 - 450374 + | trp operon repressor CBU_0510 450387 - 450689 + | hypothetical protein TERM 510 450835 - 450813 - f 74 -9.2 -3.4758 | overlap 450819 GACTAACAATACTAA GAAAAACGCC GTT AGCGTTCTTC AAGCCCCTCTTAGCC TERM 511 450829 - 450819 - f 80 -4.6 -5.19251 | overlap 450813 CAATACTAAGAAAAA CGCC GTT AGCG TTCTTCAAGCCCCTC CBU_0510a 450860 - 450979 + | hypothetical cytosolic protein TERM 512 453974 - 453988 + G 70 -7.1 -3.96696 | opp_overlap 453973 453974, overlap 453970 TTTGCAGGTGATAAG TGCGC ACCCG GCGCA TTTAATCTTCCTCTT CBU_0513 453557 - 454705 + | fructose-1,6-bisphosphatase TERM 513 455222 - 455232 + G 74 -5.4 -4.68506 | overlap 455229 ATTTGCGATTTTATG TTGC CGT GCAA TTTTTGCCATTGCTT CBU_0514 454705 - 455496 + | hypothetical membrane spanning protein CBU_0514a 455750 - 455860 + | hypothetical protein CBU_0515 456167 - 457486 + | transporter, MFS superfamily CBU_0516 457584 - 457700 + | hypothetical protein CBU_0516a 458236 - 457880 - | hypothetical protein TERM 514 458364 - 458352 - RH 74 -4.1 -5.03713 | AATAATGAAAGAAAA GCATT TAA AACGC ATTGTCAGTATAATT aspB 459990 - 458719 - | aspartate aminotransferase TERM 515 460201 - 460220 + GH 71 -2.1 -5.14965 | overlap 460195 460193 460202 CTTTAGCCGCGCAAT TTTACGC TGAAAT GCGTGAG TTTTTTCCTGAAAAT uvrB 459984 - 462002 + | excinuclease ABC subunit B CBU_0519 462062 - 462670 + | DedA family protein TERM 516 462679 - 462694 + T 70 -5.4 -4.35518 | ACCCTAATCCGATTG CCTCTT TGTT GAGAGG TTTTACTATCGACTT leuA 463599 - 462700 - | hydroxymethylglutaryl-CoA lyase TERM 517 462901 - 462924 + g 73 -4.6 -4.85599 | gap 1 TCCCAAACCTGCGAC GGCGCTATCAA TCG TTGAAA-CGCC TTTTTCTAAACTCAC TERM 518 463252 - 463262 + g 70 -5.4 -4.34482 | CAGACTCTCTTCAAT CGAA CAG TTCG TATTTTTTTGAGAAA CBU_0521 465040 - 463586 - | amidohydrolase family protein TERM 519 463623 - 463639 + g 77 -2.2 -5.4477 | opp_overlap 463632 GCAAGCCTGTTTTCT GCTTTG AAAGG CAACGC TTTTTTTGCCCATTT TERM 520 463846 - 463863 + g 79 -6.9 -4.73682 | overlap 463847 CATCGGCAAATTTTC CCGGCTC GAGT GAGCCGA TTTTATCTTCTAGCC TERM 521 463847 - 463862 + g 77 -10.4 -3.43486 | overlap 463846 ATCGGCAAATTTTCC CGGCTC GAGT GAGCCG ATTTTATCTTCTAGC TERM 522 465299 - 465357 + G 100 -33.1 -3.17075 | gap 1, opp_overlap 465316, overlap 465316 GAAAAATAATCGGCT TTTGAACTTTGGTGAAATCGCCCTGGTG GTAA CAC-AGGGCGATTTCACCAAAGTTCAAA TTAGATTCAAAAAAA TERM 523 465316 - 465340 + G 81 -10.8 -3.54459 | gap 1, opp_overlap 465316, overlap 465299 TGAACTTTGGTGAAA TCGCCCTGGTG GTAA CAC-AGGGCGA TTTCACCAAAGTTCA TERM 524 465340 - 465316 - g 81 -10.8 -3.54459 | gap 1, opp_overlap 465316 465299 TGAACTTTGGTGAAA TCGCCCTGGTG GTAA CAC-AGGGCGA TTTCACCAAAGTTCA CBU_0522 465216 - 465386 + | hypothetical protein CBU_0522a 465582 - 465854 + | hypothetical protein CBU_0523 466945 - 465851 - | IS1111A transposase TERM 525 465888 - 465908 + g 71 -2.4 -5.10461 | opp_overlap 465889, overlap 465889 TCTTGGCGTGTTAAA AGCGCCCA AATGA TCGGCGCA TTTTTATTCGCTAAC TERM 526 465950 - 465964 + g 74 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 527 467299 - 467286 - g 75 -9.5 -3.55444 | opp_overlap 467285 467292 GCGTGATGGGTTAAA GCCGG TGCA CCGGC GTGTGCTATATGCCA TERM 528 468365 - 468354 - g 83 -7.2 -4.7497 | TGCACTCATTAAAAA GGCG AAAA CGCC AGCCATTGCTAAAGA gyrA 467155 - 469707 + | DNA gyrase subunit A serC 469768 - 470850 + | phosphoserine aminotransferase aroA 470856 - 472172 + | 3-phosphoshikimate 1-carboxyvinyltransferase cmk 472173 - 472886 + | cytidylate kinase TERM 529 472982 - 472924 - f 74 -6.4 -4.40132 | gap 3, overlap 472920 472925 472926 AGGAAGTACAACAAA CTGGAGTCTGTTTACAATTC-GCTAGTCT GGAC AGACTAGTAGAATCGTAAACAGAC-CCT- AACCCGTATCTTTAT TERM 530 472983 - 472925 - f 100 -15.7 -3.22995 | gap 1, overlap 472920 472924 472926 GGAAGTACAACAAAC TGGAGTCTGTTTACAATTC-GCTAGTCT GGAC AGACTAGTAGAATCGTAAACAGACCCTA ACCCGTATCTTTATT TERM 531 472981 - 472926 - f 100 -15.9 -2.53074 | overlap 472920 472924 472925 GAAGTACAACAAACT GGAGTCTGTTTACAATTC-GCTAGTCT GGAC AGACTAGTAGAATCGTAAACAGAC-CC TAACCCGTATCTTTA TERM 532 473292 - 473282 - g 82 -8.2 -4.56597 | overlap 473283 CTCTCGCGCGAAAAA GCGC GAC GCGC TAAAGCGTGGAGCGA rpsA 473018 - 474685 + | SSU ribosomal protein S1P TERM 533 474709 - 474693 - f 100 -12.3 -5.28683 | opp_overlap 474693 ACGAATAGTAAAAAA TACCCGC TAG GCGGGTA TTTTTTTGCCCTCTC TERM 534 474693 - 474709 + F 100 -12.3 -5.45726 | opp_overlap 474693 ACGAATAGTAAAAAA TACCCGC TAG GCGGGTA TTTTTTTGCCCTCTC CBU_0529 474840 - 475130 + | hypothetical membrane associated protein TERM 535 475134 - 475147 + G 74 -3.1 -5.0925 | GACGTTCATTGATGA TAGCG CAAG CGTTA TTTTTGCTTTTGCCA TERM 536 475624 - 475609 - g 72 -6.8 -4.16146 | overlap 475601 AAAAGACTGGCAAAA GGCCAT TGAA ACGGCC CAAAAATTACTCGCG TERM 537 476181 - 476168 - g 73 -2.5 -5.16237 | AATTTCATGAAAAAA TTATT GAAA AATAA ACCCATCTATCGTTG CBU_0530 475127 - 476296 + | tetratricopeptide repeat ptrotein pyrF 476300 - 477010 + | orotidine 5'-phosphate decarboxylase TERM 538 477123 - 477113 - g 83 -2.6 -5.52384 | opp_overlap 477113 TTTTTATGAAAAAAA TAAT TCA ATTA ATTTCAGCGGTATTA TERM 539 477214 - 477199 - g 84 -7.6 -4.91852 | GTGATTAAAAATAAA CTGCAT AGGC ATGCAG CCGTGAGTACGCAAA CBU_0532 477073 - 477444 + | competence protein ComEA, helix-hairpin-helix repeat region TERM 540 477479 - 477456 - f 100 -18.2 -3.51825 | opp_overlap 477477 GTAGGTGAAGGATAA CCCTCTCCCG CAAG CGGGAGAGGG GAGAAGAAAATCTAT TERM 541 477526 - 477547 + F 100 -14.5 -4.7923 | ACCCCATCGCGCTTG TCTCTGGCG CCAG CGCCAGAGA TTTCTTTCTTTGAAT TERM 542 477936 - 477973 + G 70 -9.3 -3.26473 | opp_overlap 477940, overlap 477940 TTAGTGATCTAAGTT CAAAGCTGCGATTATTT GGCC AATTATTTGCAGCTTTG TTGATGATCATTTGG rfe 477656 - 478723 + | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase CBU_0534 480042 - 478846 - | hypothetical membrane associated protein CBU_0535 480220 - 481191 + | sporulation and cell division repeat protein CBU_0536 481347 - 481225 - | hypothetical protein TERM 543 481282 - 481307 + g 75 -8.3 -3.79251 | gap 1, opp_overlap 481284 481287 481288, overlap 481288 CCGCGCAGCGGAAAT CACAAGCGCGCT TTC AGCGCG-TTGCG TTTGGTCCTCGCCTG TERM 544 481305 - 481284 - G 70 -9.5 -2.92613 | gap 1, opp_overlap 481282 481288, overlap 481287 481288 GCGCAGCGGAAATCA CAAGCGCGCT TTC AGCGCG-TTG CGTTTGGTCCTCGCC TERM 545 481302 - 481288 - G 77 -11.4 -2.76037 | opp_overlap 481288 481282, overlap 481287 481284 AGCGGAAATCACAAG CGCGCT TTC AGCGCG TTGCGTTTGGTCCTC TERM 546 481288 - 481302 + g 83 -11.4 -3.31415 | opp_overlap 481287 481284 481288, overlap 481282 AGCGGAAATCACAAG CGCGCT TTC AGCGCG TTGCGTTTGGTCCTC CBU_0537 481372 - 481545 + | hypothetical cytosolic protein TERM 547 481548 - 481582 + F 79 -8.6 -4.08692 | opp_overlap 481560 GGACCCGGATTAGGG GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGGC TTTTAGCCGGGATTC TERM 548 481570 - 481560 - f 76 -4.6 -5.06414 | opp_overlap 481548 GGGGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGGCTTT CBU_0538 481714 - 481806 + | hypothetical protein CBU_0539 481875 - 483482 + | tripeptide permease TppB TERM 549 483482 - 483501 + F 85 -2.8 -5.71712 | AGTGGAGTTAAGTTA GCTGGC GATAAGAG GCTAGC TTTTTTTATATCAGC TERM 550 483548 - 483521 - f 79 -10.7 -3.18849 | gap 1, overlap 483519 TTTATATCAGCAATA TCTCCTCTCTCC CAAGC GG-GAGAGGAGA AAGTCGTGATCGAGA TERM 551 485613 - 485625 + G 71 -4.7 -4.72272 | overlap 485614 GAAACTACAAGACGC ACCGC AAA GCGGA TTTTTACTGCGGGAA TERM 552 485961 - 485937 - g 77 -3.6 -5.25803 | overlap 485942 AACGCTTATAAAAAA TAAAGCGTCT TCGTT AGACGATTCA CAAGGCTTATTAGCC TERM 553 486353 - 486340 - g 77 -4.5 -5.07486 | overlap 486341 CACCTTGAAGAAAAA CGCGT TTCG ACGCA GAAAGCGCTTAATGA TERM 554 486373 - 486358 - g 79 -9 -3.91897 | overlap 486370 486371 GTTTCGACGCAGAAA GCGCTT AATG AAGCGC AAGCGCAATTAGAAG smc 483661 - 487170 + | chromosome segregation protein SMC zipA 487225 - 487917 + | cell division protein ZipA ligA 487918 - 489939 + | NAD-dependent DNA ligase TERM 555 490905 - 490933 + G 83 -2.5 -5.47159 | opp_overlap 490906, overlap 490906 AAAGAAAAGAAAAAT ATCTTATCGGT TGTTGGT ATCGATAAGAA TTTTTATTTATTAAA TERM 556 491371 - 491384 + G 95 -3.1 -5.71712 | gap 1 CAACTATCGGTATTG CTGACG GGT CG-CAG TTTTTTTCTGTGGAA TERM 557 492362 - 492378 + G 75 -5.1 -4.85782 | overlap 492363 AGATTTACGACTGAG CGGAAAC GTT GTTTCCC TTTATTTTTCGGAAC TERM 558 492363 - 492377 + G 71 -8.6 -3.50746 | overlap 492362 GATTTACGACTGAGC GGAAAC GTT GTTTCC CTTTATTTTTCGGAA TERM 559 492490 - 492477 - g 74 -2.3 -5.20735 | TTAAGAAAAAATAAA TCTGC TCTG GCTGA GTTAGCCGGGCTCAT TERM 560 492545 - 492529 - g 79 -3.7 -5.2894 | AAAGAGAAAATAAAA GCTTCAA TGA TTTAAGC GATCAACATCAAGCC CBU_0543 490170 - 493025 + | hypothetical membrane spanning protein TERM 561 493475 - 493463 - g 100 -6.3 -5.47399 | GTAATTGGAAAAAAA TCGAT TCG ATCGA TTGGAACTGCGCGAG CBU_0544 493270 - 493551 + | hypothetical protein TERM 562 494091 - 494078 - g 71 -4.5 -4.6951 | overlap 494079 AGCACGGAAAATAAA CTGGC GTAC GCCAA GCAAGCTTACAACGA lemA 493610 - 494257 + | LemA family protein TERM 563 494743 - 494759 + G 84 -8.7 -4.4017 | opp_overlap 494733 AAAATCAGCGATGGT GGCTGTT ACG AACGGCC TTTTGTACAAATTAG htpX 494267 - 495313 + | heat shock protein HtpX CBU_0547 497039 - 495354 - | TPR domain-containing protein TERM 564 496524 - 496552 + g 71 -3.8 -4.8622 | overlap 496528 TTGACTAAAAGCAGC GGAATGGTGCGA GGACA TCGCAACAGTTC TTTTTAATTCGGCAA TERM 565 496603 - 496623 + g 71 -8.3 -3.55563 | opp_overlap 496602 AGCTCGATTAAAAGT CGCGCAT AATTGAA ATGCGCG TTTGCAAAATGGGGT TERM 566 496655 - 496682 + g 100 -2.9 -5.93809 | gap 1 TCAAAGCAATAGCTT TTTGATAG-GCT TTTTT AGCATTATCAAA TTTTTTTTGTCGAAA CBU_0548 498024 - 497020 - | lytic murein transglycosylase B TERM 567 497210 - 497221 + g 72 -5.8 -4.47888 | GGTATTGGAGCTGAT GGGA TAAT TCCC TTATTTTTCAATTGC rodA 499252 - 498104 - | rod shape-determining protein pbpA 501142 - 499295 - | penicillin-binding protein TERM 568 500294 - 500271 - G 71 -10.4 -2.83403 | gap 1, opp_overlap 500269, overlap 500255 500270 GGGTTGGGATCAAAG CTTGGC-TTGG TAA CCAACGCCAAG ACCTGTCCTGTGCTG TERM 569 501242 - 501227 - R 75 -10.4 -2.96249 | overlap 501224 501229 GTTCAGCAACAATGA CACGCG TCAA CGCGTG CGGCAACGTTAACGC CBU_0552 501968 - 501618 - | iojap family protein TERM 570 503088 - 503074 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 571 503150 - 503130 - g 71 -2.4 -5.10461 | opp_overlap 503131, overlap 503131 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_0554 502093 - 503187 + | IS1111A transposase CBU_0554a 503456 - 503184 - | hypothetical protein TERM 572 503519 - 503472 - R 83 -11.7 -3.10343 | gap 2, opp_overlap 503472, overlap 503478 503488 ATACGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATTGTCCCCGTATTTCGC TTCGCTCATAGGGCT CBU_0555 503753 - 503550 - | hypothetical protein nadD 504627 - 503959 - | nicotinate (nicotinamide) nucleotide adenylyltransferase holA 505627 - 504608 - | DNA polymerase III, delta subunit CBU_0558 506181 - 505630 - | rare lipoprotein B precursor leuS 508633 - 506171 - | leucyl-tRNA synthetase TERM 573 507777 - 507801 + g 70 -2.9 -4.95211 | overlap 507798 GCCACACGCGTTTGT TTGCATTTTTT TAG AAAGGCTGCAA TTTTCTTGCTTTTTT TERM 574 507798 - 507810 + g 81 -3.4 -5.41746 | overlap 507777 TTTTTTAGAAAGGCT GCAA TTTTC TTGC TTTTTTTAGCGCGTT TERM 575 508734 - 508714 - H 90 -9.7 -4.37067 | opp_overlap 508713 508712 508714 TAAATATGATCAAAA GTTGACTCC TTA GGAGGCAAC CCTTTATTCTTAAAG TERM 576 508714 - 508734 + H 70 -9.7 -2.55309 | opp_overlap 508714, overlap 508713 508712 TAAATATGATCAAAA GTTGACTCC TTA GGAGGCAAC CCTTTATTCTTAAAG TERM 577 508825 - 508842 + G 75 -9.1 -3.63744 | opp_overlap 508824 508825, overlap 508823 ATCAGTTTTACAAAC CCGGCAT GTTA GTGCCGG TATTTTCAGCCGCAG CBU_0560 508773 - 510005 + | hypothetical cytosolic protein CBU_0562 512175 - 510895 - | putative ATP-binding protein TERM 578 511718 - 511699 - G 77 -2.2 -5.35224 | CTCATAAAAAGAAAA TGGATA AATACTGA TATCCA TGTAACGACCAGTTA TERM 579 511825 - 511838 + g 70 -6.7 -4.01747 | opp_overlap 511824 511825 TCGTCGAACAAACAT TTCCC AACC GGGAA TATTTTGTATTTCAT CBU_0562a 512827 - 512405 - | hypothetical protein CBU_0563 513032 - 512817 - | hypothetical protein cutE 514509 - 513052 - | apolipoprotein N-acyltransferase TERM 580 513166 - 513194 + g 73 -4.5 -4.8622 | overlap 513174 GCCGGTTAATAGGAG TCGTTGATTCTGC GGG GCGGATTTTACGA TTTTTCCTTCGGGAC TERM 581 513174 - 513186 + g 70 -5.5 -4.31329 | overlap 513166 ATAGGAGTCGTTGAT TCTGC GGG GCGGA TTTTACGATTTTTCC TERM 582 513603 - 513617 + g 77 -3.6 -5.1861 | GAACCATTAGTCCAT TAAACA CTT TGTTTG TTTTTTCATGATAAA corC 515353 - 514502 - | CBS domain-containing protein CBU_0566 516661 - 515396 - | transporter, MFS superfamily TERM 583 515486 - 515468 - G 70 -5.9 -4.39277 | GAACATCATAAGAAA GGCGATG AATAA CAACGCC GGCAAAACAAAAAGC TERM 584 516350 - 516338 - G 74 -6.9 -4.3295 | GCCAATAAAACCAAA GGCGG ATC CCACC CCCATCAGGATGCGG TERM 585 516544 - 516533 - G 72 -5.8 -4.48743 | opp_overlap 516539, overlap 516535 AAAAGCCGAAATAAA CCCA ATCG TGGG CGCTCCAACGTTGAA CBU_0567 517175 - 516717 - | hypothetical protein CBU_0568 518143 - 517172 - | PhoH-like protein CBU_0569 519473 - 518154 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 586 518363 - 518376 + g 70 -6.7 -4.09685 | TGATTTCAGCCGCTT TCGCA TTGA TGCGA TTTTGAAGAATGGCC TERM 587 519360 - 519350 - G 86 -3.2 -5.53991 | TATTTAGTAAAAAAA CGTC AGC AACG GCGGGGTCTTCAGTT CBU_0570 521176 - 519494 - | amino acid permease CBU_0571 521816 - 521391 - | hypothetical protein TERM 588 521890 - 521876 - H 70 -2.8 -5.03747 | opp_overlap 521878, overlap 521878 AAATTTTTCAAAAAA GTTCAA ATT TTGATC AATTTGAGAAAGAGA TERM 589 522863 - 522853 - g 71 -2.4 -5.03994 | opp_overlap 522852 GTTTAGATATAAAAA CCCC CGG GGGT ATGCTCTTAATGAAA TERM 590 523318 - 523300 - g 90 -8.9 -4.7078 | GGAATTATTTAAAAA GTGAGGT AGCTG ACCTCAC CAACAGTTCACAAAA CBU_0572 522138 - 523514 + | cytosol aminopeptidase TERM 591 524250 - 524234 - g 71 -4.3 -4.71426 | opp_overlap 524239, overlap 524237 GGGTGACGAAGAAAA CATCGGC ATC ACCGTTG CATTAATTCCCGCGG TERM 592 525480 - 525494 + G 77 -10 -3.55444 | opp_overlap 525471 AAAGAAGCCGTCGGA CGCCTT GAA AAGGCG TTTCAAGAATGGCAA fadE 523524 - 525671 + | acyl-CoA dehydrogenase TERM 593 525842 - 525882 + F 73 -10.5 -2.78816 | opp_overlap 525845 525856, overlap 525856 CGGGAATCTAAGCTA AAAGGCTAAGAAAAGCGAC ATC GTTGCTTTTCTTAGCCCCC TGTCCTCCCGACTCG TERM 594 525879 - 525845 - f 100 -18.8 -4.29845 | opp_overlap 525842 525856, overlap 525856 GAATCTAAGCTAAAA GGCTAAGAAAAGCGAC ATC GTTGCTTTTCTTAGCC CCCTGTCCTCCCGAC TERM 595 525856 - 525868 + F 73 -5.5 -4.63486 | opp_overlap 525845 525856, overlap 525842 AAAAGGCTAAGAAAA GCGAC ATC GTTGC TTTTCTTAGCCCCCT TERM 596 527451 - 527425 - g 100 -16.6 -5.2696 | opp_overlap 527430 527436 CTAAAACGCAAAAAA GCAAAGCGCGGC ATC GCTGCGCTTTGC ATCGGCGGTGGCCAA TERM 597 527430 - 527446 + G 87 -11.5 -3.6502 | opp_overlap 527425, overlap 527436 ACGCAAAAAAGCAAA GCGCGGC ATC GCTGCGC TTTGCATCGGCGGTG CBU_0574 526216 - 527511 + | acetyl-CoA acetyltransferase TERM 598 527561 - 527516 - f 91 -7.8 -5.32699 | overlap 527517 527522 527523 GTAAAGACTAAAAAA CTTAAAGCT-CGTCATCCCCGC CTGC GCGG-AATGACGAAGCTTAAAA TTGAAATGGCAGCGA TERM 599 527560 - 527517 - f 76 -9.1 -3.77993 | overlap 527516 527522 527523 TAAAGACTAAAAAAC TTAAAGCT-CGTCATCCCCGC CTGC GCGG-AATGACGAAGCTTAAA ATTGAAATGGCAGCG TERM 600 527555 - 527522 - f 83 -9 -4.06778 | overlap 527517 527516 527523 ACTAAAAAACTTAAA GCT-CGTCATCCCCGC CTGC GCGG-AATGACGAAGC TTAAAATTGAAATGG TERM 601 528428 - 528449 + G 100 -10.2 -5.75342 | opp_overlap 528430 AATGATGACCGAGAG CAGTCGCA ACATGG TGCGACTG TTTTTTTTAAGAGAA TERM 602 528567 - 528579 + G 70 -10.5 -2.64472 | overlap 528563 GCTTGGTGTGCGCTT CGCGG CAT CCGCG TGACTTTACACGATA TERM 603 528635 - 528610 - g 83 -6 -5.07053 | opp_overlap 528611 528628, overlap 528600 528598 528611 AATCAGCGGAAAAAA TTGCGCCGGC GATAAA GCGGGCGCAT GCTCTTTATGAAAAA TERM 604 528611 - 528634 + G 70 -9.5 -2.89797 | opp_overlap 528600 528598 528610 528611, overlap 528628 ATCAGCGGAAAAAAT TGCGCCGGC GATAAA GCGGGCGCA TGCTCTTTATGAAAA TERM 605 528634 - 528611 - g 77 -9.5 -3.63148 | opp_overlap 528611 528628, overlap 528600 528598 528610 ATCAGCGGAAAAAAT TGCGCCGGC GATAAA GCGGGCGCA TGCTCTTTATGAAAA yfcX 527562 - 529613 + | putative fatty oxidation complex, alpha subunit CBU_0577 529601 - 530377 + | hypothetical membrane spanning protein CBU_0578 531364 - 530390 - | polyprenyl-phosphate beta-D-glucosyltransferase CBU_0579 532844 - 531351 - | undecaprenyl-phosphomannose:protein mannosyltransferase TERM 606 531895 - 531885 - G 100 -4.6 -5.64006 | ACTTAATGAAAAAAA GGGA TAA CCCC ATCGGCTGACTAAAT TERM 607 531962 - 531952 - G 71 -2.4 -5.08255 | opp_overlap 531952 AGTGTTAAAACAAAA GGGC CTA GGCC TACTATCCACAAAAA TERM 608 532369 - 532379 + g 74 -6.8 -4.43844 | GTCCATACCCACGCT GACC ATT GGTC TTTTGTCAGTGCTCG TERM 609 532898 - 532941 + H 82 -11.2 -3.14931 | opp_overlap 532898, overlap 532883 532911 CCCGTATGAAGCGAA GCGAAATACGGGATTTTA TTAAAATT TAATCTCCCGTATTTCGC TTCATACGGGCTACA TERM 610 532941 - 532898 - H 82 -11.2 -3.20723 | opp_overlap 532883 532898 532911 CCCGTATGAAGCGAA GCGAAATACGGGATTTTA TTAAAATT TAATCTCCCGTATTTCGC TTCATACGGGCTACA TERM 611 533589 - 533567 - g 75 -4.8 -4.87133 | opp_overlap 533550 533567 ATTTTTCAAATAAAA TCGATTATGC CGA GCATTTTCGA CGTTTTCTAAATTGG CBU_0580 532969 - 533790 + | hypothetical protein CBU_0581 534095 - 533760 - | ferredoxin TERM 612 533827 - 533837 + g 74 -3.2 -5.03715 | CAGTCGTCCGCATCA GGAG GGG CTTC TTTTTTGGCAGTGAT bolA 534168 - 534407 + | BolA family protein CBU_0583 534410 - 534709 + | glutaredoxin family protein TERM 613 534810 - 534780 - f 71 -6.9 -4.06055 | gap 1, overlap 534781 AGTTTTGAAACTAAA GCC-CGTCATCCCC GCGC AGGAATGACGAAGC TCCAAATTGAAATGG CBU_0584 534906 - 535223 + | hypothetical protein TERM 614 535239 - 535265 + T 100 -13.8 -3.95324 | opp_overlap 535237 535238 535241 TCAAGGATTATAACC CATCACCTTCGT AAA GCGAGGGTGATG TTATTCTTCAAAATC CBU_0585 535469 - 535266 - | hypothetical protein CBU_0586 535521 - 539036 + | pyridine nucleotide-disulfide oxidoreductase family TERM 615 539158 - 539131 - g 100 -10.6 -5.02074 | gap 1, overlap 539132 GGAGTTGGTAAAAAA GCGCGACATCGTC ATT GCCGATGT-GCGC GACCAAGACAGCTAT TERM 616 539159 - 539132 - g 83 -10.6 -3.60762 | gap 1, overlap 539131 GAGTTGGTAAAAAAG CGCG-ACATCGTC ATT GCCGATGTGCGCG ACCAAGACAGCTATG glpE 539081 - 539404 + | thiosulfate sulfurtransferase TERM 617 539692 - 539667 - g 100 -15.5 -3.14132 | opp_overlap 539657 539659 539659 TTTGGGGTGGAGCAA CCGGCAACCAC CTTG ATGGTTGCCGG AGTCCGATTTATGGG TERM 618 540009 - 539995 - g 74 -2 -5.28176 | opp_overlap 539997 GTTATTTACAAAAAA CAACGG GAG CCGATA TGATTTTATGGAAAG TERM 619 540430 - 540445 + G 80 -7.6 -4.48987 | AGGCTAAAGTGCCGC TCCAAC GGAT GTTGGA TTTTAGTTATAACCG nadA 539484 - 540479 + | quinolinate synthetase TERM 620 540510 - 540500 - g 74 -5.4 -4.72272 | CCGCCCGATGAAAAA TTGC AAT GCAA GCTTGATGTATTAAA CBU_0589 540476 - 540874 + | ferredoxin, 2Fe-2s CBU_0590 540871 - 541044 + | hypothetical protein TERM 621 541633 - 541621 - g 72 -6.9 -4.18506 | opp_overlap 541621 GCAGTGTTAAAAGAA GCGGA ATC CCCGC TTTCTGCCGTTATCG CBU_0591 541051 - 541875 + | hypothetical cytosolic protein CBU_0592 541877 - 542194 + | hypothetical membrane spanning protein CBU_0596 544063 - 543314 - | metallo-beta-lactamase family protein TERM 622 544216 - 544187 - H 83 -10.7 -3.64703 | gap 1, overlap 544191 TTTTGCGTATCGAAA TCCACAGGCGCGCC TTT GGCGCGC-TGCGCA CGTAGTGCGCTGGGT TERM 623 544212 - 544191 - H 83 -12.3 -2.66272 | gap 1, overlap 544187 GCGTATCGAAATCCA CAGGCGCGCC TTT GGCGCGC-TG CGCACGTAGTGCGCT TERM 624 544224 - 544255 + H 73 -5.6 -4.62471 | overlap 544226 GCTGCGCACGTAGTG CGCTGGGTCCCCGC CTTC GCGGGGACGACGGG TTTTTAGAAATTAAG TERM 625 544226 - 544254 + H 70 -8.8 -3.37 | gap 1, overlap 544224 TGCGCACGTAGTGCG CTG-GGTCCCCGC CTTC GCGGGGACGACGG GTTTTTAGAAATTAA CBU_0596a 544319 - 544558 + | hypothetical protein CBU_0597 545803 - 544676 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 626 546370 - 546382 + G 78 -5.5 -4.91852 | opp_overlap 546342 AATTTCACGAAGCGC GCAGT GTG GCTGC TTTATTTTTAGTGGA nudE 545856 - 546419 + | ADP-ribose diphosphatase NudE cysQ-1 546409 - 547224 + | 3'(2'),5'-bisphosphate nucleotidase TERM 627 547293 - 547244 - T 79 -10.9 -3.1505 | gap 1, opp_overlap 547249 547257, overlap 547249 547255 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGGAAATCT TAT AGTTCTCC-CGTATTCCACTTCGG TCAATAATCGCTACG TERM 628 548088 - 548076 - T 72 -9.1 -3.41709 | opp_overlap 548076 548075, overlap 548074 GAAGAGAAACCAAGA GCGTC GAT GACGC GTTTAAAGCAGCGAT TERM 629 548286 - 548274 - T 72 -3.4 -5.09895 | TATGCACGGAAAAAA TCCA TTTAT TGGA AAAAAATCTTCAAAA TERM 630 551791 - 551807 + T 74 -4.4 -4.92757 | gap 1, opp_overlap 551791 CTAAAAACTTAAAAC CCGT-CG TCCC CGCACGG TTTTGTTGTTAATCG TERM 631 551864 - 551848 - T 91 -13.7 -2.52896 | GTAGGCGGGAATCTA GCGCGCT TTT AGCGCGC AGCGCACGTAGTGCG mvaD 553433 - 551922 - | diphosphomevalonate decarboxylase/isopentenyl-diphosphate delta-isomerase TERM 632 552282 - 552315 + g 73 -6.1 -4.40561 | gap 1, overlap 552283 552286 GCTGTGATATTTCTC CGGATGGC-GTTGTTG AAG CAATAACTGCCATTCA TTATTTTTACGAGAA TERM 633 552283 - 552314 + g 72 -9.6 -3.23855 | gap 1, overlap 552282 552286 CTGTGATATTTCTCC GGATGGC-GTTGTTG AAG CAATAACTGCCATTC ATTATTTTTACGAGA TERM 634 552286 - 552311 + g 71 -7.7 -3.74868 | gap 1, overlap 552283 552282 TGATATTTCTCCGGA TGGC-GTTGTTG AAG CAATAACTGCCA TTCATTATTTTTACG CBU_0608 554367 - 553426 - | mevalonate kinase TERM 635 554120 - 554130 + g 77 -2.4 -5.42259 | ATGTTAATATCGCAT CCGC TCG GCAG TTTTTTTGAAGCTAG TERM 636 554426 - 554454 + r 71 -9.5 -2.88155 | overlap 554421 554425 TTTCAATTTTAGGCT TCGCCATTCTCGC GCA GCGGGGATGACGG CTTTAAGCTTTTTAT CBU_0609 555488 - 554466 - | putative phopshomevalonate kinase TERM 637 554837 - 554860 + g 74 -7.4 -4.2772 | gap 1, opp_overlap 554815, overlap 554815 CGGAGATGCATTCAC CGGTGCTGCTT TGT GGGCAGC-CCG TTTGTATTAATTGCA TERM 638 555136 - 555149 + g 71 -2.3 -5.0917 | overlap 555137 TCAGTGACGATATCG ATGCC CGTT GGCAA TTTATTTTTTAATCG TERM 639 555367 - 555346 - G 100 -8.7 -5.56372 | overlap 555360 AAATGAAAAGAAAAA TGCAGCGGT AAAG ACCACCGCA CCGTGGCTTCCATGT TERM 640 555438 - 555425 - G 70 -9.5 -2.92613 | overlap 555422 GGTGACCGTAAACCA CGGCG TGTT CGCCG GAAAGAATTAATTTC CBU_0610 556558 - 555485 - | hydroxymethylglutaryl-CoA reductase (NADPH) TERM 641 556589 - 556629 + H 93 -12.7 -3.89881 | opp_overlap 556573 556594 CGTAGCCCGTATGCA GCCAAGCGGATACGG GAAACAAGGCA CCGTATCCGCTTCGC TTTCTAGGGATTACT TERM 642 556624 - 556594 - H 72 -9.8 -3.07816 | opp_overlap 556589, overlap 556573 CCCGTATGCAGCCAA GCGGATACGG GAAACAAGGCA CCGTATCCGC TTCGCTTTCTAGGGA yaeT 556738 - 559149 + | outer membrane protein assembly complex, YaeT protein TERM 643 559293 - 559308 + G 71 -9 -3.39803 | AGTGTAGCTGCTGTT GCCCAA ACGG TTGGGC TTGTCGATATGCGTC ompH 559227 - 559724 + | putative outer membrane chaperone protein Skp TERM 644 559977 - 559987 + G 70 -6.8 -4.12599 | opp_overlap 559983, overlap 559979 TTGGTGATGTCCAAT CCCA AAT TGGG TTTTGCCAAATTGTT TERM 645 560677 - 560702 + G 81 -9.7 -4.09864 | opp_overlap 560676 560679 560682 GGATGCAAACTAACC GAGAATGGCGC AAAA GCGTCATTCGC TTTTGGCAACTGGAT lpxD 559734 - 560762 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 560759 - 561196 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 646 561306 - 561287 - g 91 -8.6 -4.99947 | GCTAATCAAAGAAAA TGCCATCA TTGG CGATGGCA CTGAAATCGCAGCCC lpxA 561201 - 561980 + | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CBU_0616 561977 - 562567 + | hydrolase family protein CBU_0617 564177 - 562660 - | hypothetical membrane spanning protein CBU_0618 565276 - 564182 - | acyltransferase family TERM 647 565123 - 565110 - G 74 -5.9 -4.72272 | CGCCGCCACCAAAAA CGCCG ACAC CAGCG GAAGGAAGGATTAAA CBU_0619 565820 - 565332 - | hypothetical protein lpxB 567108 - 565978 - | lipid-A-disaccharide synthase TERM 648 566850 - 566835 - G 79 -3.9 -5.1963 | opp_overlap 566849 GGTAATCAATAAAAA CCACC AAATCA GGCGG TGTTTTTTTAAAATA TERM 649 566849 - 566867 + g 72 -6.8 -4.17089 | opp_overlap 566835 566864 566866, overlap 566866 ACCACCAAATCAGGC GGTGTTTT TTT AAAATACC TTTTCAAGGTTTGCA CBU_0621 568081 - 567098 - | oxidoreductase, NAD-binding TERM 650 567852 - 567842 - G 100 -4.6 -5.81412 | overlap 567843 GTTATCCAAAAAAAA CCGC GCC ACGG CGTGATGTAAAGGGG CBU_0622 568273 - 568719 + | zinc-binding domain-containing protein CBU_0623 568724 - 568846 + | hypothetical protein CBU_0624 568946 - 569080 + | hypothetical protein CBU_0625 569281 - 569688 + | hypothetical protein CBU_0626 569797 - 571884 + | hypothetical protein TERM 651 572033 - 572047 + T 73 -7.8 -3.86266 | AGGAATATCCAATTC CTCCTC GTT GGGGAG TTGTTGTAATCGTAT CBU_0627 572132 - 572010 - | hypothetical protein ppa 572267 - 572794 + | inorganic diphosphatase TERM 652 572813 - 572860 + F 73 -8.7 -3.73224 | opp_overlap 572812 GTAGCCCGTATGAAG CGAAGCGAAATACGGGGA-GGTG CACG TATTGTTCCCGTATT-CGCTTCG TTTCATACGGGCTAC TERM 653 573884 - 573898 + G 76 -10 -3.28712 | TTGGCAAGGTTTAGG GCTTGC TGT GCAAGC TTATCAAAAACGAGC TERM 654 575394 - 575430 + G 78 -6 -4.67943 | gap 1, overlap 575401 GTCATTGTTTCTGCC TTTGATAGCGCTGGACA GCGC TGTTCAGCACT-TCGAA TTTTGTATATTCAAG TERM 655 575591 - 575577 - g 73 -5 -4.61527 | AAAACGCTGCAAAAA CACCAA GCA TTGATG CAAAAAGAAGCGAAA putA 572913 - 576053 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 656 576264 - 576252 - g 70 -6.3 -4.15565 | GTTATGACTGGAAAA GCTTT CAG AAAGC ATGACATAAAGATCG mip 576126 - 576818 + | peptidyl-prolyl cis-trans isomerase Mip TERM 657 576845 - 576887 + F 100 -15.8 -3.07816 | opp_overlap 576845, overlap 576853 CCCGTATGGAGCGAA GCGGAATACGGGGAATTGTA CAG TATTATTTCCTGTATTCCGC TTCGCTCCATACGGG TERM 658 579081 - 579032 - g 78 -10.7 -3.14931 | opp_overlap 579042 579044, overlap 579038 TTTACCGGTTACGAA GGACAAGCATTGGCGATGGGAGA ACGT TCGCCCATCGCGATTGTTCATCC TGCTGCTTCTGCTCG TERM 659 579042 - 579071 + G 85 -10.7 -3.75738 | opp_overlap 579038 579032, overlap 579044 ACGAAGGACAAGCAT TGGCGATGGGAGA ACGT TCGCCCATCGCGA TTGTTCATCCTGCTG TERM 660 580613 - 580595 - g 73 -3 -5.0925 | opp_overlap 580595 580599, overlap 580597 TTTGAAAACGAAAAA CTTATCGC TTT GCGCTATG TGAATTACGCCGGCC purL 576860 - 580834 + | phosphoribosylformylglycinamidine synthase CBU_0632 581193 - 580894 - | hypothetical protein TERM 661 582109 - 582096 - g 91 -6.7 -5.3689 | AGAAAGAAAACAAAA TGAGC AAAA GCTCA TTGAGGCAAAATTAC TERM 662 583118 - 583103 - g 73 -9 -3.54424 | overlap 583112 CTTTAGTTCGTGAAA TTCGCC AAAT GGCGAA TAGCCACAAACCGGT CBU_0634 581377 - 583269 + | putative aerobic respiration control sensor protein arcB TERM 663 583806 - 583829 + G 70 -10.2 -2.6741 | opp_overlap 583806, overlap 583805 583804 TAATAATTTTATTAA TGCTCCGGCG AGTT CGCTGGCGCA AGTTTTATTCTCGGT TERM 664 584505 - 584518 + G 71 -2.4 -5.14645 | ATATGCATTGGATGT TCCA GCACTA TGGA TTTTTGTTCCGTTCT CBU_0635 583288 - 584778 + | hypothetical membrane spanning protein CBU_0636 584821 - 585714 + | transporter, UAA family CBU_0637 586494 - 585733 - | coenzyme PQQ synthesis protein C TERM 665 586890 - 586878 - R 79 -3.4 -5.39721 | opp_overlap 586878 TGATTATATAAAAAA TAGC CCAGC GCTA TGAATTTCCATCGTT CBU_0638 588048 - 586912 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 666 586973 - 586954 - G 76 -6.3 -4.57073 | opp_overlap 586954, overlap 586956 TAGCTGCTTCAAAAA CCGGGCG ATTTCG CCCCCGG TAATTACTCGATGAT TERM 667 587558 - 587570 + g 70 -5.5 -4.39386 | overlap 587559 587564 TCTCCTTCAATTTTT TGGGT CTT ACCCG TTTTGGTAATTTGGG CBU_0639 589028 - 588048 - | pyruvate dehydrogenase (acetyl-transferring) E1 component, beta subunit TERM 668 588462 - 588479 + g 88 -4.1 -5.50723 | overlap 588463 GTCCAACGGCAGCGC CTTCCCA TCAT TGGGAAC TTTTTGTTTTACTAA TERM 669 588463 - 588478 + g 70 -7.6 -3.88807 | overlap 588462 TCCAACGGCAGCGCC TTCCCA TCAT TGGGAA CTTTTTGTTTTACTA TERM 670 588908 - 588927 + g 70 -9.2 -3.14683 | CTACCAACCCAACGG TGGCGCGG AAAA CCCCGCCA TTAATGCCGACATCT TERM 671 589128 - 589146 + r 79 -11.6 -2.52896 | AGCGCATACGTGCGC AGCGCGCC TTC GGCGCGCC TGGATTCCCGCCTGC TERM 672 589237 - 589262 + r 90 -11.1 -4.30719 | ACCCCTTCTCTCTAA CCTTCTCTCCC CGAA GGGTGAGAGGG TTTATTATCAGCCAA CBU_0640 590339 - 589233 - | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit CBU_0641 591484 - 590336 - | leucine dehydrogenase TERM 673 591276 - 591266 - G 77 -4.6 -5.17054 | opp_overlap 591274, overlap 591267 591273 AGAATATTCAAAAAA GCGA CAA CCGC CGATAGCAGGTCCGC CBU_0642 591520 - 592272 + | putative glycerophosphoryl diester phosphodiesterase ribD 592269 - 593333 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase CBU_0644 593649 - 593311 - | plasmid stabilization system toxin protein CBU_0645 593918 - 593655 - | prevent-host-death family protein TERM 674 594213 - 594249 + H 75 -10.1 -3.14931 | opp_overlap 594226, overlap 594226 ACCGTAGCTGTATGA GCGAAGTGAAATACAGG GTT CCCGTTTTCCGCTTCGC TTCATACGGGCTACG TERM 675 594882 - 594862 - g 70 -2.5 -5.02074 | overlap 594865 TTATTGTCCAAAAAA CAAGGGA GGCATTA TCCCATG CAAAAACCATTTGAT ribE 594273 - 594896 + | riboflavin synthase alpha chain ribA 594937 - 596100 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase domain/GTP cyclohydrolase II domain protein ribH 596097 - 596552 + | 6,7-dimethyl-8-ribityllumazine synthase CBU_0649 596545 - 597636 + | riboflavin transporter TERM 676 597736 - 597747 + T 70 -5.8 -4.46212 | opp_overlap 597736 ACCAGATTGGAATTA CTGC TTCC GCAG TTTTGTCATCCCGCC TERM 677 598530 - 598553 + T 86 -8.2 -5.0065 | CCTTTTCGAGAGGCT GATTCAGAGG AACT CTTCTGAGTC TTTTATTTCTGAGTC TERM 678 600086 - 600096 + T 80 -8.2 -4.44797 | opp_overlap 600085 600086, overlap 600085 CATACATTGGAAAAT GGGG CTC CCCC TTTTACTATTGATAG CBU_0656 601757 - 601425 - | hypothetical protein recR 602376 - 601771 - | recombination protein RecR TERM 679 602245 - 602271 + g 72 -10.3 -2.90496 | gap 1, opp_overlap 602251 602252, overlap 602243 TGATTGGAGGGCATC GGACAATGCCAA TCCT TTGGC-TTGTCC TGATTTCGCAAGAAG CBU_0658 602819 - 602388 - | hypothetical protein dnaZX 604458 - 602929 - | DNA polymerase III, subunits gamma and tau TERM 680 604292 - 604304 + g 74 -5.5 -4.72272 | CACTTGGCAAGGATT CGACT AAT GGTCG TTTTTCCTACGCCGC CBU_0660 604626 - 604462 - | hypothetical protein TERM 681 604512 - 604500 - G 76 -6.2 -4.46757 | AAGACAGCCACAAAA GCCG CACCT CGGC ACCCAAATCCACCGC CBU_0661 605024 - 605434 + | hypothetical protein CBU_0662 605424 - 605540 + | hypothetical protein CBU_0663 605572 - 605676 + | hypothetical protein CBU_0664 605781 - 606926 + | ISAs1 family transposase TERM 682 607352 - 607334 - g 87 -10.3 -4.39889 | overlap 607348 ATAATTATATTAAAA CCCGCAT GATTA ATGCGGG TATACCTGCCGAGGC CBU_0665 607018 - 608004 + | hypothetical protein dapE 609142 - 608018 - | succinyl-diaminopimelate desuccinylase TERM 683 608826 - 608838 + g 73 -6.2 -4.34402 | GCCGCGACGACCATG GCGG CTAAT CCGC TTTTCATATCAGCAG dapD 609963 - 609148 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase CBU_0668 610139 - 609960 - | hypothetical protein TERM 684 610251 - 610210 - g 76 -10.5 -3.38314 | opp_overlap 610224 610234, overlap 610208 610223 TTTAATGTCCAAATA TTCATATCAAAAACGTGAT TTTT ATCACATTTTCTATATGAA AAATGTGATTTATTT TERM 685 610238 - 610223 - g 71 -4 -4.81551 | opp_overlap 610224 610234, overlap 610210 610208 TATTCATATCAAAAA CGTGAT TTTT ATCACA TTTTCTATATGAAAA CBU_0669 610139 - 610312 + | hypothetical protein TERM 686 611255 - 611223 - g 71 -9.7 -3.07816 | CCGGCACTGATTGAA GTGGCGCGCCGCAAC ACG GCTGCAGCACGCATC ACCCACGTTGTTCAT rhlE 610563 - 611825 + | putative ATP-dependent RNA helicase rhlE TERM 687 612073 - 612087 + F 89 -10 -4.26076 | GAGGACAGTCGGTTG TGTCGC TTC GCGACA TTTTAATAAAAATAG TERM 688 612115 - 612100 - f 74 -4 -5.09204 | gap 1, overlap 612102 ACATTTTAATAAAAA TAGCAGC GAA GCTGC-A CATAAACTGTCCTCT TERM 689 612114 - 612102 - f 85 -9.1 -4.16909 | overlap 612100 ATTTTAATAAAAATA GCAGC GAA GCTGC ACATAAACTGTCCTC TERM 690 612807 - 612823 + G 100 -5.9 -5.78622 | opp_overlap 612807 CCTCTGGCAAAAGAA TTTCTCT TGC AGGGAAA TTTTTTTTGGAATAG rfbA 612249 - 613682 + | mannose-1-phosphate guanylyltransferase CBU_0672 615284 - 613668 - | hypothetical protein CBU_0673 615822 - 615277 - | histidinol-phosphate phosphatase family protein TERM 691 615678 - 615691 + g 81 -3.1 -5.36441 | AACCCGCTGTTTTTA GACGT ACTA ATGTC TTTTTTGTGTCCGGA CBU_0674 616406 - 615816 - | SIS domain protein CBU_0675 617153 - 616410 - | putative translaldolase TERM 692 616463 - 616444 - G 71 -7.8 -3.75598 | CAATGAATTGAATAA CGAGAGGC TTGT GCATCTCG TGCGAACATTTGAAC CBU_0676 617333 - 618346 + | UDP-glucose 4-epimerase TERM 693 619160 - 619141 - gf 70 -5.6 -4.4296 | opp_overlap 619144 619145, overlap 619144 GAATATATACCAAAA CGACCCGG GGAA CCGGATTG TACATGGGCTGATAT CBU_0677 618343 - 619380 + | NAD dependent epimerase/dehydratase family TERM 694 619598 - 619614 + G 88 -10.9 -4.15565 | CCGCAAGATTTGCGT GCTGCTA ATT TAGCAGC TTTTGAAATGGTCGA CBU_0678 619355 - 620935 + | putative ADP-heptose synthase CBU_0679 620938 - 621882 + | Gfo/Idh/MocA family oxidoreductase CBU_0680 621867 - 623177 + | UDP-glucose 6-dehydrogenase CBU_0681 623170 - 624075 + | NAD-dependent epimerase/dehydratase family protein CBU_0682 624078 - 624731 + | putative methyltransferase CBU_0683 625990 - 624728 - | FkbM family methyltransferase CBU_0684 626329 - 627747 + | sulfotransferase TERM 695 629959 - 629949 - g 72 -6.8 -4.18762 | overlap 629956 AACTCTTATTGAAAA CTGG AAA CCAG GGTCTAGTAATTATA TERM 696 630411 - 630440 + G 75 -4.3 -4.90296 | overlap 630413 GTATGAAGGGGTTGT TTCTCCAGTGCCA CCGG TGTTATTGGAGGA TTTTTATGAAGTTTT TERM 697 631358 - 631318 - g 100 -13.4 -4.25104 | TTTGCTTCATTAAAA GACGCCTTCGAGACACGT CAAGC ACGTGTCTCGAATAAGTC TAACTCGAATAAGTC CBU_0685 628192 - 631530 + | hypothetical protein TERM 698 631718 - 631732 + F 80 -10 -3.75153 | opp_overlap 631717 631716 CCAAAGGCAAAATGC GATGCC CTA GGCATC TTTCGATTGGCAAGA CBU_0686 631758 - 632468 + | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha/beta fusion protein CBU_0687 632485 - 634128 + | hypothetical exported membrane spanning protein TERM 699 634413 - 634403 - f 89 -5.4 -5.42259 | opp_overlap 634403 GCACCTTCAAAAAAA TGCT TCA AGCA ATTTGTCAGGATACT TERM 700 634989 - 634977 - g 80 -6.3 -4.74285 | ATCGACAATATAAAA CACAA TAT TTGTG TGCCATGCCAACGAA wcaG 634508 - 635506 + | GDP-L-fucose synthase gmd 635499 - 636545 + | GDP-mannose 4,6 dehydratase CBU_0690 636554 - 637411 + | polyprenyl-phosphate beta-D-mannosyltransferase CBU_0691 637404 - 638642 + | methyltransferase CBU_0692 639724 - 638663 - | putative pyruvate dehydrogenase (acetyl-transferring) E1 component, beta subunit TERM 701 639232 - 639218 - G 74 -7.2 -4.16842 | TCGATGTTCAATAAA GATAAC TGG GTTATC ATCAAAAATGCTGGA TERM 702 639693 - 639709 + g 74 -2.3 -5.28176 | overlap 639682 TTTCTCAAGGCAGCG TTGATTC TAT GAATAAA TTTTTTCTGACTCAA CBU_0693 640770 - 639721 - | putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit CBU_0694 642009 - 640897 - | glycosyltransferase CBU_0695 643447 - 642071 - | hypothetical protein TERM 703 642668 - 642687 + g 76 -2.9 -5.20216 | CGTACCTTTAAAAAA TTGTTCA AGCTGC TGAGCAA TTTTTTGATAATCTG TERM 704 643432 - 643446 + g 87 -8.6 -4.46233 | TAATTAAGTATTTTT TGCGTA ATT TACGCA TTTATTTGAGCTTGC CBU_0696 644594 - 643440 - | DegT/DnrJ/EryC1/StrS aminotransferase family protein TERM 705 643908 - 643886 - G 72 -8.4 -3.63515 | GTCGATTGGCAATAA CCGCCTGAAT CGT ATCCATGCGG CAATTAATACCATAT TERM 706 644415 - 644442 + g 80 -10.6 -3.32844 | gap 1, overlap 644416 TAATGCGTCAGTGCC TGTGCCA-ACGCC GAT GGCGTGTGGCGCG TTGTGCAATGCAGCA TERM 707 644416 - 644441 + g 79 -11.9 -2.59564 | gap 1, overlap 644415 AATGCGTCAGTGCCT GTGCCA-ACGCC GAT GGCGTGTGGCGC GTTGTGCAATGCAGC CBU_0697 645785 - 644625 - | DegT/DnrJ/EryC1/StrS aminotransferase family protein CBU_0698 646977 - 645808 - | hypothetical protein TERM 708 645961 - 645971 + g 79 -6.8 -4.69464 | overlap 645947 AGGTGTCTGGTTGAG TCGG AAA CCGA TTTTTAGCATGTTTT TERM 709 647028 - 647015 - H 88 -3.9 -5.71712 | opp_overlap 647015 GTCTATACAAAAAAA TATAG ATTA CTATA GTTTAGATTAAATAT TERM 710 647296 - 647280 - g 83 -3.7 -5.33405 | opp_overlap 647291, overlap 647282 TTGATCAAATAAAAA CATTGCT TGA AGCAATC AATATAAATATTATT TERM 711 647294 - 647282 - g 70 -6.3 -4.29436 | opp_overlap 647291, overlap 647280 GATCAAATAAAAACA TTGCT TGA AGCAA TCAATATAAATATTA TERM 712 648202 - 648188 - g 72 -7.2 -4.06778 | ATTAAAAAATGGAAA GAAAAG GCG CTTTTC AAACAACTACCTAAT CBU_0699 647180 - 648739 + | sulfotransferase CBU_0700 650532 - 648775 - | sulfate adenylyltransferase/adenylylsulfate kinase TERM 713 649123 - 649134 + g 73 -4.4 -4.78572 | TTGAGCACATATTGC CATG CCAC CATG TTTTGTTACTTCAGA cysQ-2 651347 - 650514 - | 3'(2'),5'-bisphosphate nucleotidase TERM 714 650567 - 650585 + g 85 -9 -4.32177 | opp_overlap 650558 650566, overlap 650558 CAAGAGCCAAGAATT TTGGATTT AAA AAATCCAA TTTATTGTAAAATAA TERM 715 651641 - 651653 + G 77 -4.9 -4.91109 | opp_overlap 651641 AGTCCCCTACCAAAA TCTAT GCA ATAGA TTTTTCTGATGAAAC CBU_0702 651484 - 652233 + | short chain dehydrogenase/reductase family oxidoreductase CBU_0703 652243 - 653106 + | putative lipopolysaccharide/O-antigen ABC transporter, permease protein TERM 716 653705 - 653694 - g 73 -4.4 -4.84529 | opp_overlap 653694, overlap 653687 GGAGAAAGCTAAAAA TCGT CTAA ACGA TTTTTATAAGAACAT TERM 717 653694 - 653705 + G 73 -4.4 -4.83169 | opp_overlap 653694 653687 GGAGAAAGCTAAAAA TCGT CTAA ACGA TTTTTATAAGAACAT rfbI 653116 - 653892 + | polysaccharide export ATP-binding protein CBU_0705 654933 - 654604 - | hypothetical protein TERM 718 654719 - 654740 + g 84 -4.4 -5.37593 | GATAATAGTGGTTCA GCATCGTT AATGAA AACGAGGC TTTTTTGCTTTAAGA CBU_0706 655660 - 654950 - | hypothetical protein CBU_0707 656064 - 655774 - | permease TERM 719 656577 - 656630 + r 100 -15 -3.28924 | gap 3 CGTTGGGCTTCGCAA GCTCAGCCCAACCTACGTGCTAAAATT GCC AATTTAAG--CG-AGGTTGGGCTGAGC TTGTGAAGCACAATA CBU_0711 657937 - 657794 - | hypothetical protein TERM 720 658017 - 658027 + r 73 -6.8 -4.21812 | TCTTGCTTTTTATCT CGGT GAC ACCG TTATTTTGACTAACG gacA.1 659564 - 658929 - | GacA family DNA-binding response regulator TERM 721 659018 - 659004 - G 72 -8.6 -3.57561 | GTTCAATTTTTTAAA TATCGC AAC GCGATA AGTGGAAACGGTTTT CBU_0713 660873 - 659623 - | phosphate transporter TERM 722 659777 - 659762 - G 91 -6.8 -5.4505 | TGGGGTAAGAAAAAA GCGCCT ACAA AAGCGC CTACCTTACCCCAAG TERM 723 660184 - 660216 + g 100 -3.4 -5.78622 | opp_overlap 660184, overlap 660187 ATCCAGCAGAAACCA TGCACTCG-CCGTCCC AAT GAGACGGACGAGC-CA TTTTTTTTCAAATAA TERM 724 660539 - 660524 - G 79 -4 -5.28683 | gap 1 AGCAAGACTAAAAAA CCACGTC TTT GAC-TGG GCGCATATTCGCTGG TERM 725 660758 - 660735 - G 80 -6.6 -4.79053 | opp_overlap 660748, overlap 660736 660737 660746 AAACACCAAAAGAAA TGGCGCCAAC AGCC GCCGCCGCCA GCGCGGCGCCGTTTA TERM 726 660748 - 660769 + g 100 -12.9 -3.73953 | opp_overlap 660735 660737 660746 660736 AATGGCGCCAACAGC CGCCGCCGC CAGC GCGGCGCCG TTTAATAAAGCTAAT CBU_0714 661333 - 660923 - | hypothetical protein CBU_0715 661506 - 662498 + | IS30 family transposase CBU_0716 663477 - 662557 - | thioredoxin reductase family protein TERM 727 663591 - 663580 - H 75 -3 -5.19328 | opp_overlap 663580 ATTTGACAATAAAAA TAGA TAAT TCTA TTCTGTCAACAAATA TERM 728 663693 - 663712 + H 70 -9.3 -3.16564 | overlap 663682 CAATCGTCAAATCTT TGGCGTC TTCGGT GACGCCA TTAATCCACTGGCAA TERM 729 664075 - 664095 + H 88 -11.1 -3.97368 | opp_overlap 664071 664070, overlap 664076 CGTACAAACAGCGAT AGCGCGACA AGG TGTCGCGCA TTTATCCATTCCCAC TERM 730 664076 - 664094 + H 100 -14.6 -2.981 | opp_overlap 664071 664070, overlap 664075 GTACAAACAGCGATA GCGCGACA AGG TGTCGCGC ATTTATCCATTCCCA CBU_0718 665529 - 665813 + | hypothetical membrane associated protein CBU_0719 665810 - 666235 + | hypothetical protein CBU_0720 667172 - 666291 - | agmatinase TERM 731 666472 - 666452 - G 71 -2.3 -5.0538 | overlap 666453 666454 CGTCATTCCAAAAAA GGCCGCCAG GTT CGGGGGTCC CAGTGGCAGGCATTA CBU_0721 668233 - 667172 - | deoxyhypusine synthase CBU_0722 669459 - 668257 - | putative decarboxylase, pyridoxal-dependent TERM 732 669199 - 669211 + g 75 -9.1 -3.60323 | opp_overlap 669196, overlap 669197 CATAAAGTAAAGTTC CGCTC CGG GAGCG TATTCTTTGATAATG TERM 733 669412 - 669396 - G 79 -5.1 -5.0925 | opp_overlap 669398 GCCTAAAAGCAAAAA CAGGC TGTATAG GCCTG CTCTCAGCGATAGAA CBU_0724 670697 - 669705 - | IS30 family transposase TERM 734 671135 - 671149 + r 70 -8.6 -3.39772 | overlap 671133 AATAAACTTTTTGAG TGGCTT GCA AAGCCA TATTTAAAGATTTCG TERM 735 671290 - 671307 + r 79 -4.9 -5.06816 | opp_overlap 671290 TTTCCGGCTGAATTA TAACCTT GCGC GAGGTTA TTTTTATTCGACGGT TERM 736 671798 - 671821 + r 70 -8.8 -3.43151 | opp_overlap 671787 671790, overlap 671802 AAAGTAACGGCCACC GCCATGCCGG GTAT TCGGCATTGC TTGATTACTGGTTGA CBU_0724c 672070 - 672005 - | hypothetical protein TERM 737 672074 - 672116 + H 100 -25 -3.33696 | opp_overlap 672075, overlap 672075 672098 GCGTGTCGCCAATTA ACCTGTCGTCGTCCCGCG GACAAGG CGCGGGACGACGACAGGG TTAATTGACGACCCG TERM 738 672075 - 672115 + H 100 -28.5 -2.60075 | opp_overlap 672075, overlap 672074 672098 CGTGTCGCCAATTAA CCTGTCGTCGTCCCGCG GACAAGG CGCGGGACGACGACAGG GTTAATTGACGACCC TERM 739 672115 - 672075 - H 100 -28.5 -3.33696 | opp_overlap 672075 672074 672098 CGTGTCGCCAATTAA CCTGTCGTCGTCCCGCG GACAAGG CGCGGGACGACGACAGG GTTAATTGACGACCC TERM 740 673070 - 673101 + G 73 -2.5 -5.10497 | gap 1 GGGAGTATGATAATG GCTAAATCTC-AAT TGGAT ATTGGATATTTAGC TTTTTTAGATCGATT TERM 741 673265 - 673251 - g 72 -3.4 -5.00616 | GCGTGGGTCAAAAAA CGACGC AAA GTGCCG TGCAATCTATTTTTC CBU_0727 672203 - 673336 + | ABC transporter permease TERM 742 673816 - 673798 - g 87 -8.1 -5.14563 | gap 1, opp_overlap 673804 673808 GGTGGGATGAAAAAA CGCGCTGC TTTG GC-GCGCG CCATGGCTTTAGATC CBU_0728 673333 - 674142 + | ABC transporter ATP-binding protein TERM 743 674645 - 674635 - g 90 -4.6 -5.52384 | overlap 674636 TTTTGATGAAAAAAA CCGC CGA GCGA TCAGCGCAAGTTTAG CBU_0729 674126 - 675052 + | ABC transporter periplasmic substrate-binding protein CBU_0730 675055 - 675654 + | hypothetical protein CBU_0731 676121 - 675651 - | hypothetical protein TERM 744 676985 - 676996 + rH 89 -4.4 -5.56673 | GGTTAAATCTCCCTT CATC AATT GATG TTTTTTATTATAAAT CBU_0734 677433 - 677209 - | hypothetical protein TERM 745 677735 - 677721 - gR 75 -10 -3.13403 | overlap 677719 CGTTTTTTACGAATA GGAACC GCC GGTTCC TTGCAACCGCAATGG CBU_0735 677415 - 678263 + | uridine phosphorylase CBU_0736 678937 - 678284 - | hypothetical protein tig 679226 - 680554 + | trigger factor clpP 680564 - 681151 + | ATP-dependent endopeptidase clp proteolytic subunit TERM 746 682153 - 682166 + G 76 -8.1 -4.18494 | opp_overlap 682153 682151 AGAATTGGATGAAGA TGCGC TAAT GCGCA TTTTGACTGAGCCTA clpX 681206 - 682474 + | ATP-dependent protease ATP-binding subunit TERM 747 684162 - 684150 - g 76 -6.3 -4.5394 | AGAGAAATAGCAAAA CTTTG TCG CAAAG TGGTCAAAGAAATTT lon 682488 - 684941 + | ATP-dependent endopeptidase TERM 748 685615 - 685633 + G 90 -12.4 -3.29511 | opp_overlap 685612, overlap 685626 AGAAAAAACCATTCG CCGCCTTG GCG CGAGGCGG TTGTCGACGCGTCAA pmbA 684950 - 686272 + | TldD/PmbA family protein TERM 749 686462 - 686475 + G 100 -2.4 -6.06723 | GGGCTGTGTTTTATC CCTT ATTTAA AAGG TTTTTTTTTGGGGGG CBU_0742 686356 - 686502 + | hypothetical protein ptsH 686768 - 686499 - | phosphocarrier protein HPr TERM 750 686536 - 686552 + g 76 -6.5 -4.53398 | overlap 686537 TCATTAATTAACTTT TCGATGG CTT CCATCGC TTCTTTTTCGTCTTC TERM 751 686537 - 686551 + g 76 -10 -3.30412 | overlap 686536 CATTAATTAACTTTT CGATGG CTT CCATCG CTTCTTTTTCGTCTT CBU_0744 687327 - 686749 - | HPr kinase/phosphorylase TERM 752 687291 - 687311 + g 100 -19.7 -3.74693 | AGGTTTGTTTGAGAG GCCCCGGGG TTT CCCCGGGGC TTTGATGAAGTGACA CBU_0745 687617 - 687327 - | ribosome-associated factor Y CBU_0746 688465 - 687716 - | LPS ABC transporter ATP-binding protein CBU_0747 688896 - 688468 - | cell envelope biogenesis protein YhbN TERM 753 688929 - 688902 - R 72 -8.4 -3.61244 | opp_overlap 688909 688927, overlap 688898 CACTGGACAAAGCAA CGGCTAACAGGG GAAG CCCTGTTAGTAG CAGAAGCGCTATTTG CBU_0748 689533 - 688946 - | hypothetical protein CBU_0749 690046 - 689549 - | HAD superfamily hydrolase CBU_0750 691022 - 690048 - | arabinose-5-phosphate isomerase TERM 754 690559 - 690584 + g 83 -11.1 -3.62597 | overlap 690562 GTGGTGCTCGATGTC GGAGCCAGTCC GAGG GGACAGGCTTC TTGTTCAACGCTGAC TERM 755 690562 - 690581 + g 79 -9.2 -3.94877 | overlap 690559 GTGCTCGATGTCGGA GCCAGTCC GAGG GGACAGGC TTCTTGTTCAACGCT TERM 756 690821 - 690838 + g 79 -2.7 -5.42862 | ATGGCGTACCGGTGC TTGCC AACGTAGC GGCAA TTTTTTTGGCGATAT TERM 757 692413 - 692394 - g 79 -4.9 -5.10461 | opp_overlap 692393 692406, overlap 692396 692406 TGTATTGAAGAAAAA TTGGCGC AATTAG GCGCCGA AATTCGTCGCGTGTC murA 691173 - 692477 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 758 692974 - 692984 + G 71 -2.4 -5.07486 | CCAGATTATCCTGTA CGCC CCC GCCG TTTTTGTTAAAGGTA TERM 759 693104 - 693094 - g 72 -5.4 -4.56775 | ATTTCCTGGCAAAAA CATC GCT GATG AAACAGCCACGGTGT TERM 760 693181 - 693201 + G 79 -2.5 -5.40474 | GAAGGAAATTTTTAA GCTGGATGA TAA TAATCGAGC TTTTTTTAAAAAGAT CBU_0752 692468 - 693409 + | esterase family protein CBU_0752a 693440 - 693622 + | hypothetical protein CBU_0753 696788 - 693720 - | AcrB/AcrD/AcrF family transporter TERM 761 694996 - 694967 - G 78 -6.3 -4.64598 | TAAGCATGGCAAAAA CGGAGTCAAACGC TTTA GCGTTGGTATCCG CAACGGTAACCACTG TERM 762 695511 - 695535 + g 80 -8.7 -4.19276 | overlap 695512 GGTGATTTCTTTGCT TCCTTTAATAG CAG CTATTAAAGGC TTTTCGCCGTTTTCA TERM 763 695512 - 695534 + g 81 -12.2 -3.10843 | overlap 695511 GTGATTTCTTTGCTT CCTTTAATAG CAG CTATTAAAGG CTTTTCGCCGTTTTC TERM 764 696328 - 696345 + g 73 -6.3 -4.4078 | opp_overlap 696328 TTTCGTTCTAAATAA TCCCGAA TGGC TTTGGGA TTTTCATTGGGCGCC CBU_0754 697882 - 696836 - | RND family efflux transporter MFP subunit degP.2 699237 - 697882 - | endopeptidase CBU_0756 700036 - 699398 - | hypothetical protein rluD 701060 - 700077 - | ribosomal large subunit pseudouridine synthase D CBU_0758 701120 - 701938 + | competence lipoprotein ComL TERM 765 702314 - 702330 + T 87 -5.1 -5.46629 | opp_overlap 702297, overlap 702297 702296 TTCGTCCTTCGGCGA GGCCTTT TTC AAAGCCC TTTTTTTCGAGTCTT TERM 766 702480 - 702494 + T 86 -10 -4.08216 | ATAATTATGAGCGTT CGCTTG CTC CAAGCG TTTTAACAAGGGTAG TERM 767 702564 - 702535 - T 80 -4.3 -5.28281 | opp_overlap 702536, overlap 702526 702536 AGAAAAGAAATAAAA TCTCGTGCAAAAA TATG TTTCTGAACGAGT TCCATAATACCTGCC TERM 768 702563 - 702536 - T 70 -7.8 -3.73308 | opp_overlap 702536, overlap 702526 702535 GAAAAGAAATAAAAT CTCGTGCAAAAA TATG TTTCTGAACGAG TTCCATAATACCTGC gacS 703546 - 703172 - | response regulator receiver domain protein TERM 769 703668 - 703698 + H 100 -9.8 -5.64304 | gap 1 ACCTATTTTATTTTG GGCCAGCGATGCT TCAATC GGCAT-GCTGGCC TTTTTTATTATATTG TERM 770 703845 - 703826 - g 71 -7.8 -3.81146 | CGTTTGAAGGAAGAA CGCTTGGC CAGA GCAAAGCG GGTGCAAGCGGCGCG CBU_0761 703762 - 703872 + | hypothetical protein CBU_0762 703865 - 704491 + | hypothetical protein CBU_0763 704512 - 705102 + | hypothetical membrane spanning protein TERM 771 705127 - 705144 + T 70 -3.4 -4.99043 | GGGGATTTCTCATGC TGACCT TGGGAT GGGTCA TTTTATTTCTCGCGC TERM 772 706883 - 706893 + T 72 -3.2 -5.03227 | TTTTCGCAATTTTCG GCAG CTT TTGC TTTTGTTTCTGATAT TERM 773 707060 - 707044 - T 83 -12.3 -2.5071 | opp_overlap 707044, overlap 707043 707041 707040 TGAAGAAGAAATGAC CCCACTG ATA CAGTGGG TTTGCGAAAGTTTAT TERM 774 707044 - 707060 + T 90 -12.3 -3.56862 | opp_overlap 707043 707041 707040 707044 TGAAGAAGAAATGAC CCCACTG ATA CAGTGGG TTTGCGAAAGTTTAT TERM 775 707116 - 707139 + T 71 -6.8 -4.0921 | gap 1, opp_overlap 707116, overlap 707117 707135 TGAATTTTTAGTGAA TTTGCCTAACC GTT GGTT-GGCAAG TTATTTGCGTTTTAT TERM 776 708375 - 708388 + T 73 -6.7 -4.27681 | GCTTTTGCTTTATGG CGTTG GGAG CAACG TGTTTTTTGATTACT CBU_0766 711285 - 709333 - | acetoacetyl-CoA synthetase TERM 777 709397 - 709421 + g 100 -4.4 -5.88471 | overlap 709383 709383 TCGAGAGCGGTTAAG TTATTAACCG ACTCG CCGTTAATAA TTTTTTTTACTGCTA TERM 778 710298 - 710267 - G 72 -3.6 -4.93296 | gap 1, overlap 710283 710286 GGAGTAGGATAAAAA GGCG-CGCCATCGTA AAG CACGACCGTGGCGCC GACGGCCAAACTACT CBU_0767 711583 - 711714 + | hypothetical protein TERM 779 712616 - 712633 + G 90 -4.7 -5.47399 | opp_overlap 712616 AAGTATTGGGGAAAT CGGCAGC ATTT GCGGCTG TTTTTTTAGCGTTAG CBU_0768 712126 - 713661 + | multidrug resistance protein B TERM 780 714193 - 714167 - g 73 -10.3 -3.05463 | gap 1, opp_overlap 714155, overlap 714171 714180 AGTCGTTTGATGTAA TGCACTGGCATA ATGA TATGCCAG-GCA TACCAAAGGACGTAG TERM 781 714190 - 714171 - g 74 -10.8 -2.54896 | opp_overlap 714155, overlap 714167 714180 GTTTGATGTAATGCA CTGGCATA ATGA TATGCCAG GCATACCAAAGGACG CBU_0769 713761 - 714447 + | GMP synthase CBU_0770 714614 - 715879 + | hypothetical ATPase prpB 716051 - 716923 + | methylisocitrate lyase prpC 716916 - 718034 + | 2-methylcitrate synthase TERM 782 718067 - 718049 - g 74 -2.3 -5.19212 | overlap 718054 ATTATGAGTAAAAAA CCAACGG CAATC CCGCCAG GCTATCACAGCATTA phnB 718037 - 718507 + | glyoxalase family protein TERM 783 718591 - 718577 - f 87 -5 -5.40072 | TTCCCCCTAAAAAAA TTTGCA CAA CGCAAA CTCTAGTGTTATACT pspC 718636 - 718884 + | PspC domain-containing protein TERM 784 719171 - 719149 - g 73 -2.8 -5.13741 | overlap 719152 719154 TTAACCCAAGAAAAA CAATATTTTT TAA AAAAACAATG GCCGCAAATTAAAAA CBU_0775 718891 - 719232 + | GntR family transcriptional regulator TERM 785 720032 - 720015 - g 72 -3.3 -5.00765 | overlap 720017 AATGAATTAGAAAAA TACGGCG AAAT CACCGTG CCCTCTATTAGCTAC CBU_0776 719229 - 720080 + | ABC transporter ATP-binding protein CBU_0777 720077 - 720991 + | ABC transporter permease CBU_0777c 721960 - 721562 - | hypothetical protein gacA.2 722166 - 722816 + | LuxR family DNA-binding response regulator CBU_0781 722881 - 723897 + | ankyrin repeat-containing protein TERM 786 724040 - 724071 + F 79 -8.6 -3.96681 | AATCGTAATTGCTCG CCCGTCATCCCCGC GCAG GCGCGAATGACGAG TTATTAATTTATTGG TERM 787 724132 - 724151 + G 72 -5.8 -4.4595 | gap 1, overlap 724133 724134 CGCTATTTACCTCAC TA-CCATCC GCT GGATGGATA TTTTAGCTTTTCTAA TERM 788 724134 - 724148 + G 72 -10 -2.87699 | overlap 724133 724132 CTATTTACCTCACTA CCATCC GCT GGATGG ATATTTTAGCTTTTC TERM 789 724564 - 724554 - g 76 -4 -5.06472 | opp_overlap 724554 AGAGAAAGAATAAAA GAAT TCA ATTC TTTGGCTTTAAAGTT CBU_0782 724097 - 725485 + | hypothetical protein TERM 790 725622 - 725610 - f 74 -4.1 -5.00884 | overlap 725613 ATTTTTTGTAAAAAA TATCG CAA CGACA ATAGGTGCGCGTTTG TERM 791 726589 - 726574 - f 76 -3.2 -5.28176 | overlap 726579 CTGACCGAGAAAAAA GAAGTG CGAC CACTGC CAGTAACCTGAAGCA CBU_0784 726619 - 726726 + | hypothetical protein CBU_0786 726996 - 728168 + | coA-transferase family III protein TERM 792 728332 - 728313 - g 73 -5 -4.59773 | CGTGACCTCGAAAAA TGTGCTAA TCGC TTAGCTCA CTATCTGGAACGTCA CBU_0787 728202 - 729746 + | AMP-binding enzyme domain protein TERM 793 731433 - 731413 - g 72 -5.5 -4.52873 | overlap 731410 TTCTTAGAAAAACAA CAAAGTG CTTCCCC CACTTTG CTTGCAGATTTAGCT CBU_0788 729736 - 734574 + | polyketide synthase TERM 794 735555 - 735545 - g 79 -6.8 -4.71061 | ATTCAGAGGCAAAAA GCTG AAG CAGC AAACAAAGCCAAATC TERM 795 736389 - 736376 - g 72 -6.7 -4.21275 | opp_overlap 736365, overlap 736365 736377 CGAATCGATTTAAAA GCGAA TGTT TTCGC TGAAGGCGCAAAACC TERM 796 736452 - 736469 + G 93 -11.3 -4.17316 | AAGACAATGCGTTAG CGGCTAC GGCA GTAGCCG TTGTTTTAAAGCCAT CBU_0789 734690 - 737185 + | two component system histidine kinase TERM 797 737543 - 737533 - f 78 -4 -5.26316 | CCAGTCTAGAAAAAA GAAA GCA TTTC AAGGATACCCCCATC TERM 798 741539 - 741552 + G 77 -6.7 -4.46212 | ATTGCCTTTGGAGGA GCAAC AGCC GTTGC TTTTATGCTGCCGCC TERM 799 741629 - 741641 + G 71 -4.7 -4.63089 | overlap 741630 TTGATCAGTTTATCG GCCCC GTT GGGGA TTGTTTTTTCAAGTC CBU_0792 740711 - 742099 + | multidrug resistance protein B TERM 800 742104 - 742080 - T 83 -5.2 -5.32599 | gap 1, overlap 742084 TACAAAACAGAAAAA CGAATGTCATT AGAA AATGACATT-G CAAAGATAGCCATGT TERM 801 742101 - 742084 - T 71 -7.1 -3.95047 | overlap 742080 AAACAGAAAAACGAA TGTCATT AGAA AATGACA TTGCAAAGATAGCCA CBU_0793 742817 - 742203 - | hypothetical protein TERM 802 742362 - 742337 - G 71 -9.9 -3.01924 | opp_overlap 742325, overlap 742339 TATTTGTGGCTAACA CAGTACTTATT GAGT AATAAGCACTG TAACCGCAATTGGAA CBU_0794 744258 - 742864 - | hypothetical protein TERM 803 744342 - 744328 - R 80 -2.2 -5.66989 | GAAATATTAAAAAAA TATCTT CAA AAAATA TTTGTCTTACCTGCA folE 745260 - 744694 - | GTP cyclohydrolase I CBU_0796 745601 - 745260 - | histidine triad domain protein TERM 804 745626 - 745660 + r 81 -11.7 -2.69151 | gap 1, opp_overlap 745623, overlap 745623 CCTTCAATTAAATTT TCTCTGTTATTCCTGT AGAA GCAGGAATAACAG-GA TCATCTATGGGAGCA CBU_0797 747198 - 745618 - | EmrB/QacA family drug resistance transporter CBU_0798 748194 - 747199 - | multidrug resistance protein A CBU_0799 748218 - 748343 + | hypothetical protein TERM 805 748383 - 748398 + G 71 -9 -3.38522 | overlap 748380 TGGGTATTGATGTAT GGCGTT TGCG AACGCC TGTTTCAAATCACTA CBU_0800 748340 - 748753 + | hypothetical protein TERM 806 748817 - 748836 + G 73 -6.4 -4.38322 | overlap 748819 CTGAAGCAGCGATGC CATTTCCG TGGT CGGAAAAG TTCTTTTATGATTGC rimI 748750 - 749187 + | ribosomal-protein-S18-alanine acetyltransferase CBU_0802 750014 - 749208 - | hypothetical protein TERM 807 750756 - 750744 - g 78 -10.5 -3.62096 | opp_overlap 750737 GGTGATTACGTGAAA GCGGG GGA CCCGC TGGTGACGTTAGTTA CBU_0803 750192 - 751247 + | RND family efflux transporter MFP subunit TERM 808 751660 - 751676 + G 89 -8.7 -4.71426 | opp_overlap 751659 GGGACCAAAGGCAAT CCGGTTC TGG GAATCGG TTTTATTGATCCGCA TERM 809 753806 - 753832 + G 79 -3.8 -5.30616 | overlap 753810 AATCTTCAAAAAGCA TGATTGGCATTA TCT TAATGTCACTTA TTTTTATTTACCTCG CBU_0804 751255 - 754293 + | AcrB/AcrD/AcrF family transporter CBU_0805 754767 - 754657 - | hypothetical protein CBU_0806 754978 - 754871 - | hypothetical protein CBU_0807 755036 - 756175 + | putative beta-lactamase valS 758969 - 756207 - | valyl-tRNA synthetase TERM 810 757814 - 757838 + g 73 -6.5 -4.41047 | opp_overlap 757814, overlap 757818 ACCATTGCAAATAAG TTTTTTCCCAA TTT TTGGGAATGAA TTTTAATTCGCCGCT CBU_0809 759106 - 760224 + | putative permease CBU_0810 760212 - 761279 + | putative permease TERM 811 761425 - 761413 - g 87 -10.5 -4.3534 | CCGGAACGATTAAAA GCCGC AAG GCGGC TCGTCACGCCACTTC TERM 812 762202 - 762214 + G 79 -4.8 -5.1615 | TGGACCCTGGCCATC GCGA CCGCA TCGC TTTTTTGCGTATTGC TERM 813 762269 - 762249 - g 70 -2.5 -4.90906 | opp_overlap 762249 762251, overlap 762251 GGACAATATCAAAAA GGCATGAAA GCT TATCATGTC CGTTTAAAAAAAGAG prfC 761280 - 762857 + | bacterial peptide chain release factor 3 (RF-3) TERM 814 763480 - 763490 + G 73 -2.6 -5.10656 | TATCCAGGCGTATCT TAAT ATT ATTA TTTTATTGTTTTGCT CBU_0812 762872 - 764230 + | Na+ driven multidrug efflux pump TERM 815 764289 - 764275 - f 79 -11.4 -2.71712 | overlap 764274 GGCGTCCCCGCAAAG GCGCTG ACC CAGCGC ACGGCACGCGCAGCG TERM 816 764606 - 764596 - g 74 -5.4 -4.67904 | opp_overlap 764596 764594 GATCAAGCGGAAAAA TGTG CAT CACA TGGTTTGTATTTTTC CBU_0813 764518 - 764976 + | hypothetical protein TERM 817 766288 - 766300 + T 71 -4.8 -4.65895 | ATTCTTGCTTTAACT CGCA ACGGC TGCG TTTTTGCATGGGGGA TERM 818 767155 - 767169 + T 71 -5 -4.62054 | AGAAATAACCGATTA TGATCC CTT GGATTA TTTTAATTTGATTCA aacA4 767844 - 767242 - | GNAT family acetyltransferase TERM 819 767722 - 767742 + g 76 -5.5 -4.74406 | overlap 767726 AACATGTTTTTCTTT GAACCAATT AAG AATTGTTTC TTTATATTTTTTTGT TERM 820 767726 - 767738 + g 75 -4.9 -4.7908 | overlap 767722 TGTTTTTCTTTGAAC CAATT AAG AATTG TTTCTTTATATTTTT TERM 821 768044 - 768027 - H 71 -7.1 -3.86194 | opp_overlap 768026 AATTCTGTTGACAAA CTATCTA TGAA TAGATAG AATTCTTAGCGTTAT CBU_0818 768058 - 768639 + | TetR family transcriptional regulator TERM 822 768676 - 768659 - f 78 -7.1 -4.39696 | TTTTAAATCAAGAAA CTATCTA TTAA TAGATAG GTATAGGAGAAAAAA CBU_0819 768696 - 769370 + | glutathione S-transferase CBU_0822 771975 - 770839 - | Fic family protein TERM 823 770884 - 770898 + g 77 -3.4 -5.26875 | CCAGCGGATTTCATA GGCTGC GGA GCGACC TTTTTTGGTTAACGG TERM 824 771785 - 771801 + g 70 -9.3 -3.14132 | TGTTCACCTTCTATG GCCGAGG TGT CCACGGC TTGATCGGCCAAGAC TERM 825 771807 - 771839 + g 70 -5.6 -4.34737 | gap 1 TGTCCACGGCTTGAT CGGCCAAGACAAAAG CATT CATTTGTCGTG-CCG TTTGTTGATTGATAG TERM 826 772003 - 772028 + r 100 -10.6 -5.42862 | overlap 771989 ATTGCTTCGTATTGT GAAGCGATTA TAACAT TAATCGCTTC TTTTTTTAAGCCTGT TERM 827 772399 - 772415 + r 70 -3 -5.0095 | ATTATAAATGCTGAT CCATTT CACGA AAGTGG TTTTATTATCTTTTT sfcA 774118 - 772421 - | malate dehydrogenase TERM 828 773218 - 773206 - G 73 -4.7 -4.77036 | opp_overlap 773206 TGCCAGCACCAAAAA CGGCG ATA CGCTG TTCTGGTAGGGTTGA purB 775531 - 774146 - | adenylosuccinate lyase TERM 829 775851 - 775882 + G 81 -3.6 -5.40072 | overlap 775856 GCCTTAGGCGTAGGC CCGGGGGATGAGGT AATC ACCTCTTCCTTTAG TTTTTTTGCAACGGC TERM 830 775856 - 775877 + G 87 -8.7 -4.5187 | overlap 775851 AGGCGTAGGCCCGGG GGATGAGGT AATC ACCTCTTCC TTTAGTTTTTTTGCA TERM 831 775915 - 775929 + G 82 -7.8 -4.4773 | overlap 775916 AAACGATTGTTTTTT TGGGTG CTA CACCCG TTTTCGTTGATATCG TERM 832 775916 - 775928 + G 71 -9.1 -3.27915 | overlap 775915 AACGATTGTTTTTTT GGGTG CTA CACCC GTTTTCGTTGATATC CBU_0825 775635 - 776744 + | DegT/DnrJ/EryC1/StrS aminotransferase family protein rfaH 776731 - 777234 + | transcriptional activator RfaH TERM 833 777278 - 777256 - f 70 -9.2 -3.1352 | overlap 777254 TGGTAACTCAAGATA CAGTGTTCAT GCT ATGAACGCTG ATGATAAGGACGTGG CBU_0827 777269 - 777865 + | hypothetical protein CBU_0828 777942 - 779495 + | hexapeptide repeat-containing oxidoreductase CBU_0829 779510 - 780505 + | NAD dependent epimerase/dehydratase family TERM 834 781379 - 781399 + G 73 -2.5 -5.09895 | opp_overlap 781381 781384, overlap 781384 TATTAGCTGATTGCA AACATGCTT GGC AAGCTTGTG TTTTTTACGTAGATC CBU_0830 780502 - 781656 + | perosamine synthetase asnB-1 781659 - 783557 + | asparagine synthetase CBU_0832 783558 - 784109 + | putative acetyltransferase CBU_0833 784120 - 785925 + | ABC transporter permease/ATP-binding protein CBU_0834 785938 - 786924 + | putative methyltransferase CBU_0835 786933 - 787202 + | hypothetical protein CBU_0836 787206 - 788282 + | radical SAM domain-containing protein TERM 835 788586 - 788596 + G 71 -4 -4.8622 | TAGATTACTTTACGT TAGT TTT ACTA TTTTTAATTACAAAA TERM 836 789072 - 789061 - g 100 -2.2 -6.15717 | TAAAGATAAAAAAAA TGAG GATT CCCA TTACAAGTCATTAAC CBU_0837 788297 - 789781 + | hypothetical membrane spanning protein CBU_0838 790067 - 791167 + | lipopolysaccharide N-acetylglucosaminyltransferase TERM 837 791575 - 791589 + G 78 -5.8 -4.90381 | TATTTATTCATTGTC GATAAT AAG ATTATC TTTTCTTATATTAAA CBU_0839 791303 - 792595 + | glycosyltransferase TERM 838 793064 - 793082 + G 70 -6.2 -4.20025 | CGTTATTTTGGAGCT TAAAAAAT AAC ATTTTTTA TTTCTCTTCGCAATT asnB-2 792595 - 794508 + | asparagine synthase (glutamine-hydrolyzing) TERM 839 794546 - 794527 - g 100 -4.4 -6.25242 | ATAATGAAAAAAAAA TTATTGAT TGTC ATCAACAA CGCAAAGTTTTTTCT CBU_0841 794515 - 795648 + | alpha-D-QuiNAc alpha-1,3-galactosyltransferase TERM 840 795632 - 795648 + F 73 -6.7 -4.18018 | opp_overlap 795626 795627, overlap 795627 TTTATGAAACTCTTC TTAAGAA GAT TTCTTAA TTTTAGGTGAAAAAA TERM 841 796215 - 796203 - g 76 -7.7 -4.16016 | opp_overlap 796199 TTATGTGCTAAGAAA CTGCA TTT TGCAG TCACTCATGTGGAAG wecB 795879 - 796976 + | UDP-N-acetylglucosamine 2-epimerase CBU_0843 796987 - 798144 + | glycosyltransferase TERM 842 798156 - 798146 - T 74 -4 -5.05153 | ATCGGAAAAAATAAA TTTC TAA GAAA AGTATTGCAAATACC TERM 843 798170 - 798158 - T 74 -4.9 -4.6635 | AAATTTCTAAGAAAA GTATT GCA AATAC CATTCAACAAAATTT CBU_0844 799168 - 798149 - | capsular polysaccharide biosynthesis protein CBU_0845 800445 - 799156 - | UDP-glucose/GDP-mannose dehydrogenase family protein TERM 844 800232 - 800219 - G 74 -3.1 -5.04175 | GCAACGATATAAAAA TCAGC TTTT GCTAA ATCGTCCGGGTCGTC TERM 845 801047 - 801033 - g 82 -10 -3.9281 | opp_overlap 801033 AGTAGGTGTAAATAA TTCGCG TGC CGCGAA TTTGATGAAGGAACT TERM 846 801033 - 801047 + G 80 -10 -3.72695 | opp_overlap 801033 AGTAGGTGTAAATAA TTCGCG TGC CGCGAA TTTGATGAAGGAACT ugd 800503 - 801852 + | UDP-glucose 6-dehydrogenase CBU_0847 801866 - 802630 + | oxidoreductase, short chain dehydrogenase/reductase family TERM 847 802748 - 802738 - g 84 -6.8 -5.0916 | overlap 802739 TGCGCAAGATAAAAA GCGT GGA ACGC GATTGAGTTTAGAGG pgi 802640 - 804283 + | glucose-6 phosphate 1-epimerase galU 804280 - 805167 + | UTP--glucose-1-phosphate uridylyltransferase TERM 848 805171 - 805185 + F 77 -5 -4.90455 | GTGGGGGGTTAATGG CAGTAA CTT TTGCTG TTTTTATAAATCTGT TERM 849 805387 - 805411 + G 72 -7.1 -4.02315 | opp_overlap 805394 TTAATCGTTGATATG GAGCACATCCA CCT TGGATCGGCTC TTTGCGTTTTTCCTT CBU_0850 805231 - 806124 + | hypothetical membrane spanning protein rpsO 806380 - 806649 + | SSU ribosomal protein S15P TERM 850 806686 - 806670 - g 73 -4.5 -4.82518 | overlap 806680 AAAACATGAATAAAA TTAGAAA GAC TTTCCAA TATGGCAAACATGAA pnp 806660 - 808750 + | polynucleotide phosphorylase/polyadenylase TERM 851 808773 - 808811 + T 75 -10.5 -3.07816 | gap 1, opp_overlap 808773 TCCGTATGCAGCGAA GCGAAATACGG-GAATTG TCAT TATTTCCCCGTATTTCGC TTCGCTGCATACGGG TERM 852 808811 - 808773 - T 81 -11.2 -3.07816 | opp_overlap 808773 TCCGTATGCAGCGAA GCGAAATACGGGAA TTGTCATTATT TCCCCGTATTTCGC TTCGCTGCATACGGG mgsA 809318 - 808842 - | methylglyoxal synthase CBU_0854 809343 - 809453 + | hypothetical protein TERM 853 810771 - 810787 + F 73 -8 -3.85698 | CGCTTTGTTTATTAT CAGCCA TTGTT TGGCTG TTTCTGGCACCAGCG TERM 854 812477 - 812455 - g 93 -11.3 -4.42788 | overlap 812457 TCGAAGCTTATAAAA TCGTCCGCC TTTAT GGCGGACAA AAATATGAAAACGAA TERM 855 812475 - 812457 - g 79 -11.7 -2.54632 | overlap 812455 GAAGCTTATAAAATC GTCCGCC TTTAT GGCGGAC AAAAATATGAAAACG TERM 856 812500 - 812489 - g 71 -4.4 -4.62102 | ACAAAAATATGAAAA CGAA AAAT TTCG CCACGCCACGAAGTT TERM 857 813172 - 813159 - g 72 -9.5 -3.21827 | AGAAAAATTATCGAA GCCGC CCGG GCGGC ACATGCGATGGAATT CBU_0856 811791 - 813581 + | lipid ABC transporter permease/ATP-binding protein TERM 858 813629 - 813643 + G 70 -6.4 -4.24741 | overlap 813626 CGTTCTTTATTAGGT GGGATT TTA AGTCCC TTCTCTTTTTTGTAT lpxK 813581 - 814558 + | tetraacyldisaccharide 4'-kinase nadE 816183 - 814555 - | glutamine-dependent NAD(+) synthetase TERM 859 814731 - 814709 - G 80 -8.3 -4.19506 | opp_overlap 814707 814711 ATTTCAACGTCAAAA CCCCCCGCC GCAAT GGCAGTGGG GTCTTCATCTTTAGC TERM 860 814711 - 814732 + g 71 -9.3 -3.29837 | opp_overlap 814709, overlap 814707 TTCAACGTCAAAACC CCCCGCCGC AATG GCAGTGGGG TCTTCATCTTTAGCA TERM 861 815164 - 815178 + g 74 -7 -4.41494 | GTTGATGGTCGAGGT GCGCAC ATT GAGCGC TTTTGCTTCCCCCTC TERM 862 816224 - 816206 - R 73 -10.3 -2.84581 | overlap 816205 TAACCTATTAATAAT GCCGCAA CCACT TTGCGGC CTTCGGACATTAGCG CBU_0859 816561 - 816190 - | hypothetical membrane spanning protein CBU_0860 816685 - 817146 + | hypothetical protein CBU_0863 819088 - 819198 + | hypothetical protein rpsF 819185 - 819568 + | 30S ribosomal protein S6 TERM 863 819624 - 819602 - g 74 -4.2 -5.00616 | TTTCGTCGTAAAAAA TTCTGTGCAT TTG ATGCAAAAAA TCTCCAAGAGATTGA TERM 864 819635 - 819625 - g 80 -5.4 -5.09225 | opp_overlap 819625 ATTTGATGCAAAAAA TCTC CAA GAGA TTGATTACAAAGACG TERM 865 819698 - 819680 - g 73 -10.2 -3.1211 | overlap 819665 GATTACATCATGGAA TCGGGGCG AGT CGTCCCGA GCCGGATTACCGGCA rpsR 819581 - 819802 + | SSU ribosomal protein S18P TERM 866 820231 - 820221 - g 74 -5.4 -4.68593 | CTCACTATTTAAAAA CCAA TGA TTGG ACTTCGACATTTCGA CBU_0866 819806 - 820705 + | hypothetical membrane spanning protein TERM 867 820773 - 820747 - g 79 -3.7 -5.19328 | overlap 820750 ATTTTACAAGAAAAA GTAGCCAATTT AGGGA ACATTGGCGAC CAGGTGGTTGTAAAA rplI 820717 - 821181 + | LSU ribosomal protein L9P TERM 868 821469 - 821455 - g 79 -4.2 -5.18355 | overlap 821457 GTCAAAAAGTAAAAA CCTCGG TAC CCAAAG TACCGCCTCATTCTC TERM 869 821921 - 821942 + G 80 -10.9 -3.39895 | overlap 821934 821935 TCGTGTTCGCGGCTC TGGGCCGAT AGCC ATCGGTCCA TTGCTTACTAAAGCC dnaB 821430 - 823262 + | replicative DNA helicase alr 823259 - 824353 + | alanine racemase, biosynthetic TERM 870 824470 - 824446 - g 76 -3.7 -5.1356 | TTTTATGAAGAAAAA TTTCGTTCTTT AAC AAAAAATGAAA AAGAAATTTTTAACC TERM 871 824492 - 824508 + G 75 -9.5 -3.52204 | TTTTTAACCAATTGT TGGATCA ACC TGATCCA TTGCTTTACGACTGG CBU_0870 824350 - 824598 + | TPR repeat protein udk 825771 - 825124 - | uridine kinase CBU_0873 826360 - 825761 - | Smr domain-containing protein aroC 826483 - 827541 + | chorismate synthase asd 827554 - 828576 + | aspartate-semialdehyde dehydrogenase CBU_0876 829947 - 828841 - | ThiF family domain/MoeZ/MoeB domain/rhodanese-like domain protein TERM 872 830165 - 830185 + G 79 -2.5 -5.40474 | overlap 830168 TGGGCTTCGCAAAGC TCAGCCC ACCCTAC GGGCTTA TTTTTTTGACAAAGT TERM 873 830168 - 830182 + G 71 -4.2 -4.79949 | overlap 830165 GCTTCGCAAAGCTCA GCCC ACCCTAC GGGC TTATTTTTTTGACAA CBU_0877 830133 - 830249 + | hypothetical protein TERM 874 830603 - 830592 - f 80 -4.4 -5.27938 | overlap 830596 830597 ATGTTCAAACAAAAA CAAG GCTA CTTG TCGCAAGCAGAAGTG TERM 875 832223 - 832245 + G 71 -9.2 -3.34005 | opp_overlap 832227, overlap 832227 GTAAAATACGGTGGG GAAAGTTGGT GAA ACCTACTTTC TTGTCAGAGTTGATT CBU_0880 831421 - 832806 + | hypothetical cytosolic protein CBU_0881 833714 - 833049 - | hypothetical cytosolic protein TERM 876 833464 - 833482 + g 73 -4.5 -4.78237 | opp_overlap 833466, overlap 833466 833467 ATTTGTTCATACAGA TAGCGGA AACGC TCCGCGA TTTTGTTGTCACGTC TERM 877 833606 - 833628 + g 82 -5 -5.30448 | opp_overlap 833619, overlap 833599 833620 TTAGAGGCGCGTTTT TGCTTTTT AAAAGGC AAAAAGCA TTTTTGTATTTATTT TERM 878 835096 - 835110 + r 90 -4.2 -5.98675 | CTATACACAAGCTCA GCCC AACCTAC GGGC TTTTTTATTTTTATC CBU_0883 835255 - 835121 - | hypothetical protein TERM 879 835516 - 835487 - H 71 -7.2 -3.92746 | TTTATGCTAAAAAGA CTCCTCCTTTCT ATGAAG AGGAAGGAAGAG GTAAAGCATGATCGA bipA 835524 - 837332 + | GTP-binding protein TypA/BipA CBU_0885 837344 - 838510 + | hypothetical cytosolic protein TERM 880 839284 - 839272 - g 77 -4.9 -5.01732 | opp_overlap 839272 839270 AAGTGTCTCAAAAAA TCAAT CGA ATTGA TGTTACTACCGCTAC TERM 881 839422 - 839412 - g 77 -3.2 -5.30575 | CAAAAATTTAAAAAA TCCG ATG CGAA TTGGGCGCTTAATTT TERM 882 839667 - 839652 - g 87 -5.4 -5.46698 | GGTAAAACCAAAAAA TTGCCG ATGA CGACAA AAAAGACTTTAGCAC coaBC 838542 - 839717 + | phosphopantothenate--cysteine ligase TERM 883 839815 - 839802 - T 77 -5.3 -4.99861 | opp_overlap 839802 839812, overlap 839793 839794 TAGGAAGGACAAAAA TATCC CTTT GGATA ATTTTTATCGTTTTG CBU_0888 841330 - 840887 - | DsbB family disulfide bond formation protein dsbA 841926 - 841327 - | putative disulfide bond formation protein D CBU_0890 842666 - 841965 - | Zn-dependent hydrolase, glyoxalase II family CBU_0891 842764 - 843702 + | hypothetical exported membrane associated protein truA 843707 - 844492 + | tRNA pseudouridine synthase A TERM 884 844975 - 844991 + G 71 -3.7 -4.85782 | AGAGGCAGCAATCAG TGAAAGG CTT CCTTTTG TTTGTTTTTCAACGA accD 844523 - 845398 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit beta folC 845531 - 846781 + | dihydrofolate synthase dedD 846765 - 847382 + | sporulation and cell division repeat protein dedE 847450 - 848004 + | colicin V production protein purF 848013 - 849533 + | amidophosphoribosyltransferase CBU_0898 849530 - 849862 + | thyroglobulin type-1 repeat-containing protein TERM 885 849958 - 849945 - f 73 -2.4 -5.27476 | GTTAATAAAATAAAA TTCC TTACGG GGAA ACATAACCTCGAATT TERM 886 850014 - 849984 - f 83 -9.1 -4.12043 | gap 1, opp_overlap 849988, overlap 849986 849988 GAATTAATTAAAGAA TAT-ACGCATCCGG AAAG CCGGATGCGTGATG TAGAAATCGCTTCTG TERM 887 850011 - 849986 - f 95 -13.3 -3.63901 | opp_overlap 849988, overlap 849984 849988 ATTAATTAAAGAATA TACGCATCCGG AAAG CCGGATGCGTG ATGTAGAAATCGCTT TERM 888 850009 - 849988 - f 100 -15.9 -3.38446 | opp_overlap 849988, overlap 849986 849984 TAATTAAAGAATATA CGCATCCGG AAAG CCGGATGCG TGATGTAGAAATCGC TERM 889 849988 - 850009 + F 100 -15.9 -2.62983 | opp_overlap 849988 849986 849984 TAATTAAAGAATATA CGCATCCGG AAAG CCGGATGCG TGATGTAGAAATCGC TERM 890 850488 - 850476 - g 81 -2 -5.60993 | CTTTTTATAAAAAAA TTGT TGTGT ACAA AAAAGTTAAGATTAA CBU_0900 850442 - 850606 + | hypothetical protein TERM 891 850917 - 850903 - f 70 -8.6 -3.28712 | opp_overlap 850902 TGGGCGTTTGGATAA TGATCG GTG CGATCA ATTAATGAAGCAATG TERM 892 851446 - 851436 - f 75 -5.4 -4.82128 | opp_overlap 851436 GCATCAAAGACAAAA CATC ATC GATG ATTTATTTCTTCCCA TERM 893 851724 - 851712 - f 74 -6.3 -4.39568 | ACGGATATACCAAAA TCGAT ATC ATCGA ACGCCGCCTCCCTTT TERM 894 853330 - 853341 + F 70 -5.8 -4.46112 | GCTGTGCTGATTTTA CGGT GAAA ACCG TTTATTTAAATCCCC TERM 895 854541 - 854551 + F 70 -8.2 -3.65529 | opp_overlap 854541, overlap 854548 AGCCTATTTATGGAA GGGC AAC GCCC TTTACGTAGGGCTCT TERM 896 855530 - 855552 + G 74 -5.5 -4.66163 | TGTTCCAAGGACAAC CCGGTGCTA AAAAA TGGCGTCGG TTTTTGCATGAAAAT CBU_0904 854566 - 855627 + | tRNA-dihydrouridine synthase A rpmE 855878 - 855639 - | LSU ribosomal protein L31P CBU_0906 855998 - 857296 + | transporter, MFS superfamily yciL 857892 - 857314 - | BolA ispZ 858440 - 857895 - | intracellular septation protein TERM 897 858080 - 858066 - G 100 -2.8 -5.98781 | opp_overlap 858066 GAGAATTAAAAAAAA TAAAGC CCA GCTTAA ATTTAAGCGTGACCA TERM 898 858449 - 858435 - G 79 -2.9 -5.39681 | ATAATCAAATAAAAA TTTCA TAAGG TGAAA GAGCCTCTCTTTTTT TERM 899 858641 - 858631 - g 72 -5.4 -4.49556 | overlap 858632 GGGCTAGGAAACAAA TCAG GGG CTGA ACGCATCCGCCGACT CBU_0909 858493 - 859107 + | sua5/YciO/YrdC/YwlC family protein TERM 900 859427 - 859404 - g 74 -2.4 -5.25805 | overlap 859406 AAGAAACTGAAAAAA TCGCTCGCTA TTTT CAACAAGCAA AATTACCTGTTATTA CBU_0910 859205 - 860179 + | hypothetical membrane associated protein CBU_0911 860325 - 860182 - | hypothetical protein TERM 901 860523 - 860568 + r 100 -15 -3.78775 | gap 1, opp_overlap 860518, overlap 860529 CCCGTATGAAGCGCA GCGGAATACGGGGACGATAGA AGACA TCT-TTGTTCCCGTATTTCGC TTTGCTCATACGGGC TERM 902 860529 - 860562 + r 71 -7.6 -3.87551 | gap 1, opp_overlap 860518, overlap 860523 TGAAGCGCAGCGGAA TACGGGGACGATAGA AGACA TCT-TTGTTCCCGTA TTTCGCTTTGCTCAT prpD 862043 - 860619 - | 2-methylcitrate dehydratase CBU_0913 862518 - 862045 - | thioesterase family protein TERM 903 862581 - 862560 - R 100 -14.5 -5.85178 | opp_overlap 862565 AAGACGTAAAAAAAA GGGAATGCC CAAA GGCATTCCC TAAATGAACTAATCT TERM 904 862739 - 862727 - R 71 -4.9 -4.51238 | TTTATAAAAGATAAA CAAAA TTT TTTTG TAGAAAGCTCAATAT CBU_0914 863872 - 862757 - | hypothetical membrane spanning protein enhB.1 864383 - 863874 - | enhanced entry protein TERM 905 864358 - 864348 - G 76 -2.6 -5.23644 | AATTAAACAGAAAAA TAAA ATT TTTA AATAATAAACTCTCA CBU_0916 864577 - 865344 + | endonuclease/exonuclease/phosphatase family protein TERM 906 866851 - 866835 - f 84 -6.7 -4.84359 | TTATTTCTATAAAAA GAATAAT AGT ATTATTC GCCCTGCGAGGATAT TERM 907 867402 - 867392 - g 100 -5.4 -5.85011 | GAAAAATTAAAAAAA GAAC TTG GTTC ACTATATGCTGATAT TERM 908 867470 - 867456 - g 84 -8.6 -4.40561 | overlap 867453 CTTCCTCAAAAAGAA CCATTG AAT CAATGG CTTGGAAGATAAAAT TERM 909 867724 - 867712 - g 81 -2 -5.59564 | overlap 867696 867702 AGAAATTCAAAAAAA TTCT GAAAG AGAA GGCTTAGAAAATGAA CBU_0918 866870 - 868639 + | hypothetical protein TERM 910 868671 - 868642 - f 85 -12.4 -3.23045 | overlap 868640 ATTCATATATTAATA TAGTGGTGATTA GTGTGA TAATCACCACTA GCTAGGCATTTATTT CBU_0920 870210 - 871325 + | fatty acid desaturase, family 1 TERM 911 871545 - 871555 + GT 71 -6.8 -3.97043 | GAAAACATGCTTGGT GACG CCT CGTC TTCTTCTATGTTAAG CBU_0922 872931 - 871618 - | transporter, MFS superfamily CBU_0921 871356 - 871670 + | hypothetical cytosolic protein TERM 912 871757 - 871739 - Gf 71 -3.8 -4.74103 | overlap 871743 TGCTGAACTGAAAAA TGAGGAAC GCC GTTCACCA TCTGCCCTGTCCATA TERM 913 871856 - 871869 + gF 72 -5.9 -4.46742 | opp_overlap 871844 AAAGCCACTACGGTT GCTGC TAAT GCGGC TTTATTGATTTCTTT TERM 914 873088 - 873107 + G 79 -12.2 -2.57132 | opp_overlap 873078, overlap 873087 ATAGACCCTCTCCTA CTCTTCCG ATTG CGGAAGAG CTTGTGGAAGGAAAC TERM 915 873481 - 873493 + G 70 -6.9 -4.06678 | overlap 873480 TTTAATGTTTTAGTG GGCGG GGG CCGTC TTTATCTCGGTCAGT CBU_0923 873052 - 874182 + | hypothetical protein CBU_0924 874845 - 874177 - | O-methyltransferase CBU_0925 875848 - 874847 - | putative lytic murein transglycosylase TERM 916 875225 - 875167 - G 100 -17.7 -2.94232 | opp_overlap 875184 875185, overlap 875166 875184 875185 GTTTCGCTAAATAAT TGGCAATGGAAGCAAAAGCATCGGGAA GATCA TTCCAGATGTCTTTTCTTCCATCGCCA TCATAATCAACAGCG mmsB 876842 - 875949 - | 3-hydroxyisobutyrate dehydrogenase mmsA 878348 - 876852 - | malonate-semialdehyde dehydrogenase (acetylating) TERM 917 877120 - 877108 - G 72 -7.7 -3.90048 | opp_overlap 877107 877106, overlap 877106 CTTTTTGTAAAAATA GCAAC ACC GTTGC CGTATTCATTTTTGT TERM 918 877373 - 877400 + g 71 -9.8 -3.05384 | CTAAGTGTTCTTTAG TCACGAGCGGAC CGAA GTCAGCCCGTGA TTCAGTGCCCGCCGC TERM 919 877412 - 877430 + g 71 -5.2 -4.53077 | GTGATTCAGTGCCCG CCGCAATT TGG AGCTGCGG TATTTTTTCTTTTAA TERM 920 877509 - 877499 - G 70 -6.8 -4.11235 | CAACCACCACAGAAA CTGC CAT GCAG CGCTCGCCAGCTGCC TERM 921 878316 - 878338 + g 100 -8.6 -5.68023 | opp_overlap 878316 TTTAGCATCAACGAA TTTACCATTG ATA TAATGGTAAA TTTTTTTCATTCTAA pdxH 878970 - 878380 - | pyridoxamine 5'-phosphate oxidase CBU_0929 879837 - 878992 - | short chain dehydrogenase/reductase family oxidoreductase CBU_0930 880507 - 879827 - | 3-methyladenine DNA glycosylase glpD 881993 - 880491 - | glycerol-3-phosphate dehydrogenase TERM 922 881101 - 881083 - G 74 -7.6 -4.25256 | opp_overlap 881086 GGTTTAGTAAAATAA TAATTGAT CGA ATCAATTA AATAATTCGTTTCTT TERM 923 881701 - 881670 - G 77 -7.4 -4.43208 | gap 1, overlap 881673 881674 AGAGGCGTAAAGAAA TAAG-CCTGTTCGGA TCA TCCAAACAGGGCGTA AATGCGCGTCATGCG TERM 924 881697 - 881673 - G 85 -9.3 -4.32678 | overlap 881670 881674 GGCGTAAAGAAATAA GCCTGTTCGGA TCA TCCAAACAGGG CGTAAATGCGCGTCA TERM 925 881696 - 881674 - G 86 -12.8 -3.18884 | overlap 881673 881670 GCGTAAAGAAATAAG CCTGTTCGGA TCA TCCAAACAGG GCGTAAATGCGCGTC TERM 926 883173 - 883183 + G 76 -8.2 -4.23213 | TACTGGGACCCCAAC GCGC GGG GCGC TTTATTCGGTCTGAC gplK 882060 - 883604 + | glycerol kinase CBU_0933 884346 - 883573 - | ABC transporter permease protein TERM 927 883795 - 883785 - G 80 -4.6 -5.26316 | opp_overlap 883785 TGATGGGATAAAAAA CCCC ACC GAGG TAAGTTAAAGGCGTA CBU_0934 885261 - 884347 - | ABC transporter ATP-binding protein CBU_0935 885656 - 885267 - | RNA binding protein CBU_0936 886418 - 885849 - | OmpA-like transmembrane domain-containing protein TERM 928 886485 - 886463 - H 71 -6.4 -4.14392 | CTTTAACTTTCAAAA CTCTAACTAT TCC ATAATCAGAG CCGGGAGTCAAGCTT TERM 929 887933 - 887919 - g 74 -7.8 -4.13282 | opp_overlap 887922, overlap 887920 ATTACACGTTCAAAA CCGGCT CAA AGCCGA GCTCCATTGGCATCG CBU_0937 886730 - 888181 + | hypothetical protein TERM 930 889623 - 889611 - g 74 -4.1 -4.93547 | opp_overlap 889611 TTAATTAATCAAAAA TCGTC TTC AACGA CTTCTTTAAAAAAGA CBU_0939 889062 - 890588 + | AsmA family protein TERM 931 890938 - 890966 + G 72 -5.8 -4.5442 | CTTATCCAGCCTACC CGGCATCGGCCG CTCAA CCGCCGGCGCTG TTTTATCGTTAGGGA TERM 932 891583 - 891618 + G 95 -11.8 -4.15788 | gap 1, opp_overlap 891581 891580 891578, overlap 891584 GTATAAAGAACACTC AGCGCTACC-GGGCGGT ATT GCCGCCCCGGTAGCCCG TTTATTGAAACAATT TERM 933 891584 - 891617 + G 93 -15.3 -3.08991 | gap 1, opp_overlap 891581 891580 891578, overlap 891583 TATAAAGAACACTCA GCGCTACC-GGGCGGT ATT GCCGCCCCGGTAGCCC GTTTATTGAAACAAT mutY 890594 - 891658 + | A/G-specific adenine DNA glycosylase CBU_0941 891655 - 891927 + | hypothetical protein CBU_0942 892312 - 891929 - | hypothetical protein TERM 934 892313 - 892300 - G 72 -3.1 -4.91046 | GACAAAAGAAACAAA GACGT CTTA ACATC GCAACTCCTTAAAGT TERM 935 892523 - 892512 - g 81 -2.2 -5.60993 | TTTTTGAGAAAAAAA TGGC TTTT ACCA CAGGGCCTGTAGAAG CBU_0943 892388 - 892828 + | rhodanese-like domain-containing protein TERM 936 892980 - 892994 + T 70 -8.6 -3.36919 | opp_overlap 892969, overlap 892969 CCAATTTTACCAGTT GGTCAA AAT TTGACC TTGTGGGCGTTTTGT TERM 937 893270 - 893257 - T 74 -5.3 -4.788 | AAATTAATTTAAAAA TCACT AAAA AGTGA CAAATTATAAAAATT CBU_0944 893417 - 893316 - | hypothetical protein TERM 938 893477 - 893431 - R 70 -9 -3.18452 | opp_overlap 893446, overlap 893434 ATTACTTTAAGGTAA CGATTTTTTTAGACAGTAAAAG ATC CATTTACTTTCTAAAAAAACTG TCACTGGCCCATCAC TERM 939 893474 - 893434 - R 80 -11.5 -2.78891 | opp_overlap 893446, overlap 893431 ACTTTAAGGTAACGA TTTTTTTAGACAGTAAAAG ATC CATTTACTTTCTAAAAAAA CTGTCACTGGCCCAT TERM 940 893585 - 893527 - R 79 -9.99999 -3.53031 | gap 3, opp_overlap 893534, overlap 893528 TTTATTTGAAATCAA TCGGTTATACCCCCTGTCACTACGTTATC TTGC GCTAACGTAGTGACAGGGGGTATTA---A ATCTTAAATCATAAT TERM 941 893586 - 893528 - R 100 -16.3 -2.71497 | gap 1, opp_overlap 893534, overlap 893527 TTATTTGAAATCAAT CGGTTATACCCCCTGTCACTACGTTATC TTGC GCTAACGTAGTGACAGGGGGTATTAA-A TCTTAAATCATAATT TERM 942 893534 - 893581 + r 100 -28.8 -3.19522 | opp_overlap 893527 893528 GAAATCAATCGGTTA TACCCCCTGTCACTACGTTATC TTGC GCTAACGTAGTGACAGGGGGTA TTAAATCTTAAATCA CBU_0945 894629 - 893658 - | hypothetical membrane associated protein TERM 943 894122 - 894153 + g 71 -4.6 -4.61868 | TTTTTTTGGGTTTTG TATTTGTAATCAAT ATGT ATTGATGCCAAATA TTTTCTATCTCAGTA rhuM 895740 - 894754 - | death-on-curing family protein TERM 944 895367 - 895391 + g 74 -10.1 -3.13403 | overlap 895365 895385 TTATCAATGGTGTAA CCTTGAAGTAA ATG TTGCTTCAGGG TCTTGGTAGCCCAAA TERM 945 895515 - 895542 + g 91 -6.4 -5.42131 | gap 1, overlap 895518 895531 TATTGCCTTCCATTT G-AACCGTTTCCA AAA TGGAAACAGTTGC TTTTTTCTCTAATTC TERM 946 895518 - 895538 + g 78 -8.3 -4.01646 | overlap 895515 895531 TGCCTTCCATTTGAA CCGTTTCCA AAA TGGAAACAG TTGCTTTTTTCTCTA TERM 947 895563 - 895573 + g 74 -5.4 -4.64598 | TCTCTAATTCACCTC CCTT ATA AAGG TTTTTCAAATGCTTG TERM 948 897313 - 897303 - g 93 -5.4 -5.5454 | TCAAAGAAACAAAAA GGTA AAT TACC AACAATATGTTTAGA CBU_0948 897282 - 897737 + | hypothetical protein CBU_0949 898245 - 897877 - | hypothetical cytosolic protein TERM 949 898013 - 898029 + g 72 -7.3 -4.07675 | ATTTGCTGACGTTTT TTGTCAC TGG GTGGCAA TTTCGTTAATTTTAC TERM 950 901205 - 901188 - R 79 -5.5 -4.86773 | overlap 901190 CAAAATCATGAAAAA GAGCAGC AATG GCTGCTA AAATTTGAATGCCAT TERM 951 901203 - 901190 - R 75 -8.1 -4.02953 | overlap 901188 AAATCATGAAAAAGA GCAGC AATG GCTGC TAAAATTTGAATGCC TERM 952 902218 - 902200 - R 77 -5.3 -5.00616 | gap 1 GTTCGCGCTAAAAAA TGGAGTGC CACC GC-CTCCA CAAAAACCGATCAAC CBU_0952 903234 - 902551 - | hypothetical protein TERM 953 902794 - 902805 + g 70 -3 -4.91511 | opp_overlap 902776 902775 CTGGCGCAGCTCAGC GAAA GCTT TTTC TTTTTCTACTAAACT CBU_0953 904648 - 903323 - | amino acid permease TERM 954 903617 - 903631 + g 83 -4.2 -5.40474 | overlap 903614 903611 903611 CCCTAGTATCGCCGC CGATGG CGT CCGTTG TTTTTTTGAAAGCGT TERM 955 904306 - 904293 - G 74 -9.5 -3.41359 | opp_overlap 904288, overlap 904291 CCGGCAAAACCAAGA GCCGC CGTT GCGGC TGAGGCTATTTTTGC TERM 956 904711 - 904685 - R 95 -11.7 -4.43307 | TCTTTAAGAAAAGAA TCAACCAGTTG TCGAG CAACTGGCTGA AGATGGGAGTCCCGG CBU_0954 905431 - 904685 - | phosphohydrolase (MutT/nudix family protein) TERM 957 905081 - 905096 + g 82 -4.8 -5.24551 | GGAAAGGCATTGGCG TTCAAA TATA TTTGAA TTTTTCTTCGTTTCC gacA.3 906103 - 905450 - | LuxR family DNA-binding response regulator TERM 958 905778 - 905790 + g 77 -4.8 -4.91109 | GCTCGTTCTAATTCC GCAG AATCA CTGC TTTTTGTGATAAAAC TERM 959 906259 - 906269 + r 78 -2.6 -5.3671 | overlap 906266 CCTTTAAAACGCACC TTTA GAT TAAA TTTTTTACTTCTGTT CBU_0956 906902 - 906240 - | hypothetical membrane associated protein TERM 960 906321 - 906336 + g 75 -4.6 -4.94222 | AGTCTCAATAATTTT CCGGGC CAGC GCTTGG TTTTTATGGCTTATT TERM 961 906482 - 906472 - G 70 -2.6 -4.93296 | opp_overlap 906477, overlap 906477 CCAGCATCAGAAAAA TTAA AGA TTAA AAATCTATTGCTATT TERM 962 907257 - 907242 - g 81 -3.2 -5.43621 | ACAAACGAGAAAAAA GTAACC TTTG GGTTTC AACCATCGATCAACC CBU_0957 907098 - 908342 + | hypothetical protein TERM 963 908950 - 908977 + T 100 -7.8 -5.6473 | opp_overlap 908950 TTTCTGCTTTTAAAA TACGGTCGAG ACGCTCAA TTCGACCGTA TTTTTTTGATATTGT TERM 964 908977 - 908950 - T 73 -7.1 -4.07568 | opp_overlap 908950 TTTCTGCTTTTAAAA TACGGTCGA GACGCTCAAT TCGACCGTA TTTTTTTGATATTGT TERM 965 909815 - 909788 - T 76 -7.6 -4.15237 | opp_overlap 909786, overlap 909789 AATAAATGAAAAATA TGGAGGCGCAAC AATA GCTGCTCCTCCG GGTTAAATTCAATTT TERM 966 909814 - 909789 - T 78 -11.1 -3.06702 | opp_overlap 909786, overlap 909788 ATAAATGAAAAATAT GGAGGCGCAAC AATA GCTGCTCCTCC GGGTTAAATTCAATT CBU_0959 913529 - 912300 - | Bcr/CflA subfamily drug resistance transporter TERM 967 913466 - 913456 - G 73 -4.6 -4.78597 | GGAACAATAAATAAA GCGA TAG CCGC ATACCAATAGCGTTG CBU_0960 913674 - 914225 + | DNA-binding protein/cupin domain protein CBU_0961 914235 - 914408 + | hypothetical protein CBU_0962 915117 - 914419 - | short chain dehydrogenase/reductase family oxidoreductase TERM 968 914714 - 914724 + g 100 -2.6 -6.04378 | overlap 914709 ATCTCGCTACTCATA TTAA TGA TTAA TTTTTTTTCTGATTT TERM 969 914981 - 915009 + g 80 -4.6 -5.29782 | GATTGCTTTTTTTCT GCTGCCAATTCA AAAAG TGAATTAGAAGC TTTTTTATCCCTGTA bcp 915641 - 915117 - | antioxidant, AhpC/TSA family CBU_0964 915645 - 916556 + | hypothetical protein CBU_0964a 916841 - 917029 + | hypothetical protein TERM 970 918381 - 918407 + G 77 -4.4 -5.03145 | ACATGGCAGACAGCC GTGGGTAGTG GAGGGAA TGCTGCCCAC TTTTTTAGGCACTTC cydA-2 917026 - 918591 + | cytochrome d ubiquinol oxidase subunit I TERM 971 918584 - 918574 - f 86 -4.6 -5.4756 | AACCCCAATAAAAAA GCGG AGT CCAC AGCATGATTGAATAC TERM 972 918676 - 918688 + G 74 -6.9 -4.36372 | overlap 918677 TGGATGGATTCGATC TCGGC GCT GCCGG TTTATTACCTTTTTT TERM 973 918803 - 918814 + G 80 -7.2 -4.52857 | CGGCGGGGTTTTATT GGCC GCCT GGCC TTTTCTGTACGCCGT TERM 974 919199 - 919212 + G 73 -5.2 -4.63179 | opp_overlap 919181, overlap 919196 CGCATTGATTATGGC GCGG ATCATG CCGC TTTTAGTTATTCTTT cydB 918588 - 919721 + | cytochrome d ubiquinol oxidase subunit II ybgT 919732 - 919836 + | cyd operon protein YbgT CBU_0968 920495 - 919965 - | putative phospholipase D TERM 975 920594 - 920573 - H 73 -2.3 -5.27335 | TCTCGCAAATAAAAA TGATTATCA TTCG CGTTAATCA ATTATCAGGAGTTTT CBU_0970 920613 - 921668 + | hypothetical exported membrane spanning protein TERM 976 921705 - 921669 - T 85 -12.4 -3.16177 | overlap 921673 ATCGGATACACCTAA TTTATACCCTCTCTCG TCTGG CGAGAGAGGGTCAAAA ATTCCACGATATTTT TERM 977 921701 - 921673 - T 90 -13.2 -2.56571 | overlap 921669 GATACACCTAATTTA TACCCTCTCTCG TCTGG CGAGAGAGGGTC AAAAATTCCACGATA pyrD 922708 - 921665 - | dihydroorotate dehydrogenase 2 TERM 978 921909 - 921898 - G 82 -7.2 -4.63184 | AAGTCATTGGAAAAA GCGG TTTG CCGC TGAGTCCCCCCGCTT CBU_0972 923397 - 922705 - | hypothetical cytosolic protein TERM 979 923035 - 923003 - G 77 -9.9 -3.5936 | overlap 923004 923006 GGCAAATGCGGTAAA TGAGCGACTTGATAA CGA TTTTCAAGTCGCCCT TGCGAATAATCCGTC TERM 980 923034 - 923004 - G 85 -13.4 -2.75294 | overlap 923003 923006 GCAAATGCGGTAAAT GAGCGACTTGATAA CGA TTTTCAAGTCGCCC TTGCGAATAATCCGT TERM 981 923032 - 923006 - G 82 -12.4 -2.91888 | overlap 923004 923003 AAATGCGGTAAATGA GCGACTTGATAA CGA TTTTCAAGTCGC CCTTGCGAATAATCC TERM 982 924026 - 924012 - g 74 -5.6 -4.65895 | opp_overlap 924012 924017, overlap 924013 924014 924016 TCGTTTATGCAAAAA CCGATC CCG GAGCGG GTTCTCGCGGCATTA TERM 983 924033 - 924045 + G 76 -2.6 -5.26875 | CCGGAGCGGGTTCTC GCGG CATTA CTGC TTTTTTAATTGAAAA CBU_0973 923486 - 924649 + | isovaleryl-CoA dehydrogenase TERM 984 925245 - 925230 - g 72 -5.4 -4.48175 | gap 1 AAAAGCCAACGAAAA CGGCAGC TTC GCT-CCG GAAATAGTCCCGATA TERM 985 925569 - 925559 - g 100 -4 -5.88471 | GATTATTAAAAAAAA TTTC TTG GAAA AAAGAAGCCGTGGAT CBU_0974 924649 - 925833 + | acetyl-CoA acetyltransferase TERM 986 925939 - 925925 - g 73 -4.4 -4.7657 | TAAAAATGCCAAAAA TTATTT CCA AAATAA AAACGGCTAACGAAG TERM 987 926600 - 926575 - g 77 -9.7 -3.64703 | gap 1 CCTCCGTTAGTCAAA GCGGCTGTCGGT GAA ACCGTCA-CCGC TGAAGAATTGGGCGG CBU_0975 925858 - 927522 + | acyl-CoA biotin-dependant carboxyltransferase TERM 988 927698 - 927688 - g 76 -4 -5.05116 | CGACAAAGAAGAAAA TAAC CGG GTTA TAATAATTAAAGCCG CBU_0976 927542 - 928312 + | methylglutaconyl-CoA hydratase TERM 989 928805 - 928788 - g 75 -8.3 -3.72576 | CCGCTTCTTATCAAA GCCTCCG CTGG CGGTGGC GGAAAAGGAATGCGT TERM 990 929747 - 929733 - g 70 -2.8 -4.99643 | overlap 929735 CAGCAAAAAAAACAA GCCAAA GAA TTTGCC ACTCAATCCGACGAC CBU_0977 928314 - 930299 + | biotin carboxylase CBU_0978 930350 - 930817 + | hypothetical membrane associated protein CBU_0979 931150 - 930848 - | putative lipoprotein CBU_0980 931518 - 931240 - | putative lipoprotein TERM 991 931570 - 931549 - H 84 -2.4 -5.73563 | ATCAAATGAAAAAAA TATTCCTT TCTACT AAAGAATA GCATTTCCTTAATAA CBU_0981 931661 - 931753 + | hypothetical protein CBU_0982 931822 - 932904 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 992 934208 - 934186 - g 74 -5.8 -4.59853 | opp_overlap 934180 TGAATTCTGGAAAAA TTATTTTTCT TCT AAAAAAATAA AAATCTTAGAAATGA TERM 993 934489 - 934533 + G 100 -12.3 -5.18726 | gap 1 TACTAAACTGTCCCC TTTCCCTGACGCTTC-TCGC GAACAA GCGAAGGAGCGCTAGGGAAA TTTTTATTGTCGAGG CBU_0984 933752 - 934528 + | prephenate dehydrogenase TERM 994 934825 - 934814 - g 71 -2.2 -5.08088 | AATTTTCAAGAAAAA TCCC CGCG AGGA TGCACCGCCTAAAGC TERM 995 935059 - 935048 - g 80 -4.4 -5.26875 | CTCGGAATTAAAAAA TCGA TTTA TCGA CCTTAATATTCCCTT CBU_0985 934557 - 935315 + | hypothetical cytosolic protein TERM 996 935376 - 935330 - T 100 -21.1 -5.34055 | gap 1, overlap 935337 ATAAAGACTAAAAAA CTTAAAACCC-GTCATCCCCGC GCAG GCGGGGATGACGGGGACTTAAG AGGGCGCAGGGGCTT TERM 997 935368 - 935337 - T 100 -26 -4.5366 | overlap 935330 CTAAAAAACTTAAAA CCCGTCATCCCCGC GCAG GCGGGGATGACGGG GACTTAAGAGGGCGC CBU_0986 936184 - 935372 - | RNA methyltransferase TERM 998 935839 - 935849 + g 77 -4.6 -5.16237 | opp_overlap 935837, overlap 935838 935846 TTAATAACAAAGCCG GCGT TTC GCGC TTTTTTAATAAACTT TERM 999 936692 - 936674 - g 81 -6 -5.00616 | GCCGCTGCTAAAAAA CTCGGTTA CGT TAATCGAG GAACGGCCCTCGTTG CBU_0987 936218 - 937015 + | rare lipoprotein A TERM 1000 937145 - 937124 - g 76 -8.7 -3.96481 | AAAAAAGAACGCAAA GCGGGAAAA ATTA TTTACCCGC CGCAAAAAGATATTT TERM 1001 937340 - 937350 + G 72 -6.8 -4.1552 | CTGGGTGTTTCAATC CCGT CCC ACGG TTTCTTAGAAAAATG ung 937019 - 937708 + | uracil-DNA glycosylase TERM 1002 939929 - 939941 + F 79 -4.9 -5.08824 | CCTTGTTTTCTTAAT TCTTT AAA AAAGA TTTTTTCAATGAAGG TERM 1003 940388 - 940367 - f 70 -9.5 -2.74523 | opp_overlap 940367, overlap 940364 TGATTCGCAATACTA CTCACACGA TTAA TCATGTGAG TTCCTTGATAATTAT def 941108 - 941620 + | peptide deformylase CBU_0994 941798 - 941691 - | hypothetical protein CBU_0995 941938 - 942222 + | putative cytochrome c oxidase, membrane subunit TERM 1004 942893 - 942919 + G 74 -2.2 -5.28315 | overlap 942898 AATTAATATCCTACT CTATACGCTATT ATT AACAGCGATTAG TTTTTTACCTTTTGT ctaB 942219 - 943136 + | protoheme IX farnesyltransferase CBU_0997 943145 - 943261 + | putative lipoprotein purA 944601 - 943294 - | adenylosuccinate synthetase TERM 1005 944000 - 944010 + g 91 -6.8 -5.42198 | opp_overlap 944000 AGTGCTGAAACATCA CCGA TCA TCGG TTTTATTTTTTCACG hflX 945986 - 944622 - | GTP-binding proten HflX TERM 1006 945550 - 945578 + g 74 -6.6 -4.4078 | overlap 945553 CGCTCTAAGTGGCCC CACCCTCGCACC AGCCG GGTGCTGAGGTG TTTTAATTGAGCCAG TERM 1007 945553 - 945576 + g 77 -8.9 -3.8125 | gap 1, overlap 945550 TCTAAGTGGCCCCAC CCTC-GCACC AGCCG GGTGCTGAGG TGTTTTAATTGAGCC lolD 946684 - 945983 - | lipoprotein releasing system, ATP-binding protein TERM 1008 946203 - 946223 + g 74 -10.4 -3.1733 | gap 1, opp_overlap 946203, overlap 946201 946200 GGCTCGGTTACTAAA GCGCG-CGC TAAA GCGACGCGC TGCTTTTCTCCACCG TERM 1009 946223 - 946203 - G 80 -10.4 -3.72576 | gap 1, opp_overlap 946203 946201 946200 GGCTCGGTTACTAAA GCGCG-CGC TAAA GCGACGCGC TGCTTTTCTCCACCG TERM 1010 946297 - 946277 - G 71 -9.7 -3.06183 | opp_overlap 946272, overlap 946282 TTGACGGTGACTTAA GCCAACCTT TTC AAGGTAGGC CGAGGCTTTTTGTCT lolC 947921 - 946677 - | lipoprotein releasing system, transmembrane protein, LolC/E family TERM 1011 947156 - 947143 - G 77 -2.4 -5.40474 | ATGGCTTTAAAAAAA GAAC CAAATT GTTC TGTCCAATTCGTTAC TERM 1012 948118 - 948096 - gR 71 -9.8 -2.90075 | overlap 948075 CGCTTCTCAATGACA GGCGCTTCCA CCC CGGAACCGCC ATCGGCCAGGCCTTG TERM 1013 948351 - 948339 - gR 70 -9.1 -3.12663 | overlap 948338 ACGAGTATTTAAAAC GGGTG AAC CACCC TCAACAACTAAACAT bioD 949671 - 948943 - | dethiobiotin synthetase birA 948044 - 949015 + | bifunctional biotin operon repressor/biotin synthetase BirA bioC.2 950414 - 949668 - | putative biotin biosynthesis protein BioC bioH 951108 - 950404 - | putative carboxylesterase BioH bioF 952256 - 951102 - | 8-amino-7-oxononanoate synthase TERM 1014 951797 - 951783 - G 83 -7.2 -4.87807 | opp_overlap 951783 951782, overlap 951774 GGAAGACATTAAAAA TTTGAG TTG CTCAAA ATTTTGATGTGGATA bioB 953208 - 952243 - | biotin synthase TERM 1015 953049 - 953063 + g 70 -5.7 -4.30576 | AATAGGCGCAATCTT CAGGA CACGT TCCTG TTTTAATACTGGAAA TERM 1016 953384 - 953368 - H 79 -11.5 -2.52896 | GCAGGCGGGAATCTA GCACGCC TTC GGCGCGC TGCGCACGTGTGCGC TERM 1017 953690 - 953679 - g 74 -2.2 -5.1861 | CTTATTATTAAAAAA GCCT ATGG AAGC TATATTGAACTCAGC TERM 1018 954382 - 954367 - g 80 -9 -4.11216 | GCCGCACGGGGAAAA TGCTCG CGTG CGAGCA TGCCGGAATTATTCC TERM 1019 954615 - 954598 - g 83 -4.1 -5.4505 | opp_overlap 954600 TTTCTGAAGAAAAAA TATGTGC ACGA GCTCATA AATTGGGCAAATTCA bioA 953577 - 954905 + | adenosylmethionine-8-amino-7-oxononanoate transaminase TERM 1020 955097 - 955107 + F 70 -5.4 -4.33004 | TGGGAATATTCAACT GTGA CGC TCAC TTCTTTTAATTGGCT TERM 1021 955129 - 955141 + F 75 -7.7 -4.05816 | TAATTGGCTTCTTGG GTGGT TAT ACCAC TTTCTCGTCATTTTC TERM 1022 955243 - 955256 + G 79 -8.1 -4.4078 | TCTTTGTATTGCAGG CGCCT GGTT AGGCG TTTTAATTGGGAGGC CBU_1010 955210 - 955590 + | hypothetical protein TERM 1023 955602 - 955638 + T 100 -24.7 -4.99043 | opp_overlap 955614 GTAGCCCGTATGGAG CGTAGCGGAATACGGGA AAT TCCCGTATTTCGCTACG TTTTATTTGTAAAAC CBU_1011 956825 - 955641 - | lignostilbene-alpha,beta-dioxygenase TERM 1024 955834 - 955823 - G 93 -5.8 -5.5454 | GTAAAGAAACAAAAA CAGG CTCG CCTG GATAACACATTGTTT TERM 1025 958973 - 958959 - H 70 -5.6 -4.47007 | overlap 958956 958961 GAAAAATGAAAATAA TTGGCC CCC GGCCGA TAAAAACATATTTCG TERM 1026 959400 - 959360 - H 95 -6.3 -5.58074 | opp_overlap 959363, overlap 959363 959366 GAAGCATTAAAAAAA GAATTAGATGATTCATTTA ATT TAATCGAATCATCAAATAC GCTTAAGGAGAACCA TERM 1027 959397 - 959363 - H 84 -6.6 -4.8487 | opp_overlap 959363, overlap 959360 959366 GCATTAAAAAAAGAA TTAGATGATTCATTTA ATT TAATCGAATCATCAAA TACGCTTAAGGAGAA TERM 1028 959394 - 959366 - H 70 -8.3 -3.28715 | opp_overlap 959363, overlap 959363 959360 TTAAAAAAAGAATTA GATGATTCATTTA ATT TAATCGAATCATC AAATACGCTTAAGGA CBU_1014 960466 - 960660 + | hypothetical membrane associated protein TERM 1029 960645 - 960635 - f 89 -6.8 -5.28166 | TAAAATTAATAAAAA TGGC GAA GCCA AAAGCTCAAGTTTGA TERM 1030 960669 - 960679 + F 76 -3.2 -5.22312 | AGTTTGAATGAAGAT GAGG TTT CTTC TTTTTTAATATGGAT TERM 1031 961010 - 960992 - f 73 -7.4 -4.10855 | opp_overlap 960992, overlap 960995 AAAATTGTTGTAAAA CTATGTGG GTT CCACAAAG TATTAAAGATACAGT CBU_1015 961125 - 961670 + | hypothetical cytosolic protein TERM 1032 962025 - 962012 - g 82 -8.1 -4.56775 | opp_overlap 962011 962012 ATGCGTGTCTAAAAA TCCCG TTTG CGGGA CTTTACGGGAGCTCC CBU_1016 961969 - 962121 + | hypothetical protein TERM 1033 962130 - 962106 - f 87 -8.6 -4.60746 | opp_overlap 962111 CGAAAAACAGCAAAA CCTGAGGGAT TTTTG ATCCCTTAGG TTACAGCAATTACGC TERM 1034 962165 - 962189 + F 72 -4.3 -4.81249 | opp_overlap 962165 962174, overlap 962150 962149 TTTTAGAGTTAAAAC CTCTAAAAATC TTT GTATTTTAGAG TTTTTAGGTTTAAAA TERM 1035 962212 - 962174 - f 74 -4.9 -4.66264 | opp_overlap 962165, overlap 962165 TAAAACCTCTAAAAA TCTTTGTATTTTAGA GTTTTTAGG TTTAAAATACAAAGA TATGGGAGTAGAGAG CBU_1017 962236 - 963378 + | hypothetical ATPase TERM 1036 963459 - 963401 - T 100 -16.5 -4.2231 | gap 2, opp_overlap 963403, overlap 963402 AATTATCAGGGAAAA GGGACGCTCGTTAGTTGTCAAGTTACT AAGGTAG AGTAACTTGACAACTAACGAGTG--CC CCCCTTTTTGAATAG TERM 1037 963460 - 963402 - T 100 -27.2 -3.12663 | opp_overlap 963403, overlap 963401 ATTATCAGGGAAAAG GGACGCTCGTTAGTTGTCAAGTTACT AAGGTAG AGTAACTTGACAACTAACGAGTGCCC CCCTTTTTGAATAGT TERM 1038 963403 - 963461 + T 90 -12.9 -2.64324 | gap 2, opp_overlap 963401 963402 TTATCAGGGAAAAGG G--ACGCTCGTTAGTTGTCAAGTTACT AAGGTAG AGTAACTTGACAACTAACGAGTGCCCC CCTTTTTGAATAGTT CBU_1018 963912 - 963556 - | hypothetical protein TERM 1039 963677 - 963694 + g 81 -3.5 -5.44119 | overlap 963679 TTTTTTTCAGCTTTA TATAGTA CTAA TACTATG TTTTTTTCAACTAGC CBU_1019 964171 - 963953 - | hypothetical protein CBU_1020 964674 - 964423 - | hypothetical protein TERM 1040 964751 - 964772 + H 72 -8.7 -3.44552 | opp_overlap 964750, overlap 964750 GGTCCAATAGCACAT GGGCTATGT AAAG GCATGGCCC TATTATTCATGCAAT CBU_1021 964833 - 965276 + | nucleotidyltransferase CBU_1022 965269 - 965568 + | nucleotidyltransferase domain-containing protein CBU_1023 966353 - 967309 + | quinone oxidoreductase CBU_1023a 967315 - 967593 + | hypothetical protein TERM 1041 970556 - 970543 - f 70 -9.5 -2.74144 | opp_overlap 970536, overlap 970542 GGGGCAGCGCCAAAT GGCGC GACA GCGCC GTAAAAATGACGTTG TERM 1042 970765 - 970776 + G 82 -7.2 -4.60487 | opp_overlap 970764 970765 AACAGTTTTCAAAAG CGGG GGTG CCCG TTTTTACAACTGATG TERM 1043 971358 - 971370 + G 81 -6.3 -4.99947 | TTAATCTTCTTTTTT GATGA AGC TCATC TTTTATTTAATTCCG TERM 1044 971891 - 971876 - g 95 -11.8 -4.33808 | CAAACCAATTCAAAA GCGGCC ACCC GGCCGC CCTCGTCAAAGCGTT CBU_1027 970617 - 972008 + | ATPase CBU_1028 972926 - 972024 - | hypothetical protein TERM 1045 974963 - 974949 - g 74 -10 -3.19442 | opp_overlap 974946 ATGCAAGACATCGAA CGCCTT GAT AAGGCG CTCTCACTTCACGAA CBU_1031 974769 - 975209 + | phage lysozyme TERM 1046 975447 - 975460 + T 76 -2.4 -5.40474 | GAGGATGTAAGCACC GTCA CCCTTA TGAC TTTTTTTGACAAAAT TERM 1047 976198 - 976214 + T 70 -9.5 -2.62616 | overlap 976201 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCAGCTGA pgsA 976893 - 976258 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1048 976782 - 976770 - G 75 -4.8 -4.77925 | overlap 976763 AAAAAATTCCAAAAA TCGG GATAG CCGA TAAACGCACAAATGT TERM 1049 977414 - 977451 + G 76 -10.5 -3.409 | gap 1, overlap 977412 TTTGGATTTCGTAGA GCCGCGGGGCTTGCA-AG CTA CTATGCCAGCCGCGCTGC TGTTATTGGCGGTTT TERM 1050 978187 - 978173 - g 70 -7.1 -4.00407 | overlap 978160 ATGGAAAAAGGCAAA CGCCT TTTTG AGGCG AAAAAGCCGTTGGAA CBU_1035 976940 - 978346 + | nicotinate phosphoribosyltransferase TERM 1051 979822 - 979873 + T 79 -6.7 -4.62085 | gap 3, opp_overlap 979838 979839, overlap 979823 979824 ATTGCATTGGGCGTC GG-CGCCGGCGG-GGAAACCCGCCAA GGA TTGG-GGATTTCTATCGTCGGCGGTC TTGTTTTTTCACAAT TERM 1052 979823 - 979871 + T 73 -8.2 -3.91465 | opp_overlap 979838 979839, overlap 979822 979824 TTGCATTGGGCGTCG GCGCCGGCGG-GGAAACCCGCCAA GGA TTGG-GGATTTCTATCGTCGGCGG TCTTGTTTTTTCACA TERM 1053 979824 - 979870 + T 82 -11.7 -2.93795 | opp_overlap 979838 979839, overlap 979823 979822 TGCATTGGGCGTCGG CGCCGGCGG-GGAAACCCGCCAA GGA TTGG-GGATTTCTATCGTCGGCG GTCTTGTTTTTTCAC cyoD 980801 - 980466 - | cytochrome O ubiquinol oxidase protein cyoC 981394 - 980798 - | cytochrome c oxidase polypeptide III cyoB 983397 - 981391 - | cytochrome c oxidase polypeptide I TERM 1054 982252 - 982226 - G 74 -5.8 -4.59993 | AAAGTGATAAAGAAA GCGAATACCCAT AAC ATCGGCGTTCGC ATAATAATTTTGCCC TERM 1055 982508 - 982494 - G 70 -5.6 -4.37886 | overlap 982479 982495 CGACTTCTGAGAAAA CGCCGA AAG CCGGCA AAATTAAAATATAAA cyoA 984313 - 983417 - | cytochrome c oxidase polypeptide II CBU_1041 984476 - 984321 - | hypothetical protein CBU_1042 984470 - 984871 + | hypothetical membrane spanning protein gacA.4 985558 - 984914 - | LuxR family DNA-binding response regulator CBU_1045a 988196 - 988083 - | hypothetical protein TERM 1056 988391 - 988406 + r 79 -3.2 -5.40072 | overlap 988382 988387 ACCCTCGCGACCCCG TCCCTT TGAT ACGGGA TTTTTTTAGGCAAGC TERM 1057 991289 - 991301 + r 70 -9.1 -3.18366 | opp_overlap 991288 991287 991289, overlap 991287 991285 991298 CGATAATAAGAAATG GGCCA ATC TGGCC TGTGTTAATTGGCAC TERM 1058 991840 - 991830 - R 70 -5.4 -4.43477 | CGTAGGGAAGCAAAA GCAT CCG ATGC TGCAAAAAGAAAATG TERM 1059 992720 - 992688 - R 85 -8.4 -4.4595 | gap 1, overlap 992689 GGACAAAATGTAAAA TCGTCATCCTGC-GC TCAA GCTGCGGGATGACGG AAAACGGGCATTTTT TERM 1060 992719 - 992689 - R 83 -11.9 -3.26486 | gap 1, overlap 992688 GACAAAATGTAAAAT CGTCATCCTGC-GC TCAA GCTGCGGGATGACG GAAAACGGGCATTTT TERM 1061 993182 - 993160 - R 93 -11.3 -4.44974 | gap 1, opp_overlap 993155, overlap 993150 GGAAAGGTTACAAAA CCCCGCGCGT ACGT ACG-GCGGGG TAAGGTTATTCAAAT csrA-2 993400 - 993188 - | carbon storage regulator CBU_1051 994769 - 993540 - | aspartokinase alaS 997372 - 994775 - | alanyl-tRNA synthetase TERM 1062 995263 - 995253 - G 70 -6.8 -4.15044 | overlap 995254 TTCGTTTTTAATAAA TCGC TGA GCGA ACGTAATTGTTGCTC recX 997799 - 997365 - | regulatory protein RecX TERM 1063 997714 - 997724 + g 74 -6.8 -4.39318 | GGAAGCTTGTAGCCT CTCG TAA CGAG TTTTCGCTTTAATTC TERM 1064 997790 - 997775 - G 70 -5.4 -4.32046 | TCGCCAAAAAGGAAA TTGCGC GATT ACGCAA ATCCGTCATTCTGCT recA 998827 - 997796 - | recombinase A CBU_1055 999415 - 998915 - | competence/damage inducible protein CinA TERM 1065 1000173 - 1000158 - g 71 -4.7 -4.69656 | AATCAGTGAAGAAAA TAGCG TTCATC CGCTA AAAGCCGACTCCATC mutS 999550 - 1002165 + | DNA mismatch repair protein TERM 1066 1002355 - 1002341 - g 86 -2.1 -5.68489 | overlap 1002331 TATAATAATAAAAAA CCTTA TTAAC CAAGG GAAAGGAGCCAGCCT CBU_1057 1002162 - 1002905 + | glycosyltransferase involved in cell wall biogenesis CBU_1058 1002918 - 1004204 + | hypothetical membrane spanning protein CBU_1059 1004909 - 1004175 - | RNA pseudouridine synthase family protein scpB 1005548 - 1004919 - | segregation and condensation protein scpA 1006380 - 1005553 - | segregation and condensation protein TERM 1067 1005752 - 1005732 - G 77 -6.9 -4.58213 | CAACCAACGATAAAA TTCGCGA CATCCGT TCGCGAA TAGATAAAGGCTCGC TERM 1068 1005988 - 1006006 + g 70 -3 -4.95547 | overlap 1005991 ACGACGTACCAATTC TGCGCGGG GGT CTTGCTCA TTTTCTTCTTCTACA TERM 1069 1006466 - 1006480 + G 74 -4.2 -5.00616 | overlap 1006467 ACCATTAGATCCGAT ACCCTT AAT AAGGGA TTTTTTCCACACAGC CBU_1061a 1006431 - 1007537 + | hypothetical membrane associated protein CBU_1063 1007671 - 1009077 + | hypothetical protein CBU_1064 1009367 - 1009083 - | hypothetical cytosolic protein CBU_1065 1009949 - 1009395 - | 2'-5' RNA ligase TERM 1070 1009708 - 1009718 + g 73 -2.6 -5.03961 | TCTATTTTATTGATA TTTA TTT TAAA TTTTATTGTTTCCTT TERM 1071 1009845 - 1009862 + g 70 -5.6 -4.41241 | CCACCGCAAATGAGT CCATTG CTTGAT CAATGG TTTTATCGCCGTTTG TERM 1072 1011608 - 1011627 + G 70 -5.6 -4.40692 | overlap 1011606 1011611 GATCCCTTTTTAATG GCAGTGGC CATT GCCGCTTC TTGTTCTTTTTTAAC CBU_1066 1010006 - 1011787 + | transporter, divalent anion:sodium symporter family ttcA 1012554 - 1011784 - | PP-loop family protein TERM 1073 1012125 - 1012107 - G 71 -2.4 -5.0538 | overlap 1012113 GTCCATTGTAAAAAA CAGACA TCAGCAG CGTCTG AATCAAATCATCGCG CBU_1067a 1012620 - 1014368 + | adenylate cyclase TERM 1074 1015221 - 1015233 + T 85 -2.7 -5.82036 | AAAGAATACTTGATT TATGC GTT GTATA TTTTTTCTTTCTTAT CBU_1071 1017106 - 1016678 - | DoxX family protein TERM 1075 1016950 - 1016932 - G 71 -4.6 -4.62783 | overlap 1016935 CACCCAGCTCAAAAA TGATCGAT AGA ATCGATAA CCACTGCGGTGATGG TERM 1076 1018085 - 1018102 + G 72 -3.3 -4.96646 | ATTTAATCGACGTGG TGGCGGC AGGA GTCGACA TTTTTGATTGTGTCG tgt 1017271 - 1018428 + | queuine tRNA-ribosyltransferase TERM 1077 1018462 - 1018493 + G 90 -12.4 -3.36671 | CTCTTGTTAATTCTC TCTTTTGGCTGCGT CCAG GCGCAGGCAAAAGA TTATCAGATTGAAAT CBU_1073 1018432 - 1018938 + | hypothetical protein CBU_1074 1019520 - 1018960 - | hypoxanthine-guanine phosphoribosyltransferase TERM 1078 1019141 - 1019151 + g 71 -2.4 -5.06451 | opp_overlap 1019121 GCGGAATAAACTTCT CCCG CTC CGCG TTTTTTGCAATAATC CBU_1075 1020658 - 1019507 - | transporter, small conductance mechanosensitive ion channel (MscS) family TERM 1079 1020526 - 1020513 - G 72 -3.1 -5.00884 | AGCGCTTGTAAAAAA GCTTG CAAC CAAAC CCGCTGCCGTCGCTG TERM 1080 1020809 - 1020866 + H 100 -20.4 -3.21354 | gap 2, opp_overlap 1020799 1020814, overlap 1020820 1020828 AAGTAGCCCGTATGA GCGAAGCGAAATACGGGGACAATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGCTTCGC TTCATACGTATATGG CBU_1075a 1020878 - 1021150 + | hypothetical protein CBU_1076 1022241 - 1021147 - | IS1111A transposase TERM 1081 1021184 - 1021204 + g 71 -2.4 -5.10461 | opp_overlap 1021185, overlap 1021185 TCTTGGCGTGTTAAA AGCGCCCA AATGA TCGGCGCA TTTTTATTCGCTAAC TERM 1082 1021246 - 1021260 + g 74 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT nagZ 1023249 - 1022308 - | beta-hexosaminidase CBU_1078 1023591 - 1023253 - | hypothetical cytosolic protein TERM 1083 1023406 - 1023423 + g 76 -4.2 -5.06414 | ACTTCGTTTTACACC CTGAAA CTCTGT TTTCAG TTTTTCTTCAGAAGG CBU_1079 1024195 - 1023599 - | hypothetical protein CBU_1080 1024755 - 1024273 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1084 1024799 - 1024779 - R 85 -11.2 -3.42197 | opp_overlap 1024779 TAATAAATTGGATAA CACCCCAT AAACA ATGGGGTG TTTGAGTTTGAAGGT TERM 1085 1024779 - 1024799 + r 90 -11.2 -3.84719 | opp_overlap 1024779 TAATAAATTGGATAA CACCCCAT AAACA ATGGGGTG TTTGAGTTTGAAGGT CBU_1081 1025166 - 1024828 - | hypothetical protein TERM 1086 1025147 - 1025132 - G 74 -7.6 -4.15565 | TTTAGGATTTTAAAA GCCTTT ATAA AAAGGC GATAATAATATGCAC TERM 1087 1025296 - 1025249 - R 72 -9.4 -3.09516 | gap 2, opp_overlap 1025249 GCCCGTATGAGCGAA GCGAAATACGGGGAAACAATGG TGTTGT CAATCG-T-CCCCGTATTTCGC TTCGCTCCATACGGA miaA 1026283 - 1025348 - | tRNA delta(2)-isopentenylpyrophosphate transferase mutL 1028014 - 1026287 - | DNA mismatch repair protein TERM 1088 1027418 - 1027432 + g 72 -3.6 -4.94972 | TGTAGTGGCTGATTT GAAATG AAT TATTTC TTTTTCATTATGATG TERM 1089 1027540 - 1027556 + g 76 -10.1 -3.29263 | opp_overlap 1027539 1027542, overlap 1027521 1027542 GCGAGCGTAAAAATT TACGCCG AGC CGGCGTG TTATAAAACAAATCT TERM 1090 1027542 - 1027554 + g 74 -10.5 -3.21395 | opp_overlap 1027542 1027539, overlap 1027521 1027540 GAGCGTAAAAATTTA CGCCG AGC CGGCG TGTTATAAAACAAAT TERM 1091 1027554 - 1027542 - G 72 -10.5 -2.84617 | opp_overlap 1027521 1027540 1027542, overlap 1027539 GAGCGTAAAAATTTA CGCCG AGC CGGCG TGTTATAAAACAAAT CBU_1084 1030126 - 1028075 - | hypothetical protein CBU_1085 1031381 - 1030164 - | N-acetylmuramoyl-L-alanine amidase CBU_1086 1031508 - 1032500 + | IS30 family transposase CBU_1087 1032989 - 1032543 - | hypothetical protein CBU_1088 1034469 - 1033003 - | putative carbohydrate kinase TERM 1092 1033369 - 1033353 - G 74 -7.3 -4.1822 | overlap 1033364 CTTCATTGCAAGAAA TTCCCAA CAA TCGGGAA GCTTCGCCGGGATGA TERM 1093 1033860 - 1033846 - G 76 -4.2 -5.04385 | GACAGCCCGAAAAAA GGACTC CGA AAGCCC TAAGCGATCCACGAT TERM 1094 1034346 - 1034358 + g 73 -9.1 -3.53224 | opp_overlap 1034355 1034356 GAGCCTCGGGCCATC GCGCT AGA AGCGC TTTAAAAGCGGCCTC TERM 1095 1034444 - 1034468 + g 76 -5.7 -4.78477 | overlap 1034436 TCTAATTCGCGAATT TGGCGGTTTTG GTA CAATACTGTCA TTCTTTTTTCTCTAT CBU_1089 1034505 - 1034603 + | hypothetical protein TERM 1096 1035646 - 1035632 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 1097 1035708 - 1035688 - g 71 -2.4 -5.10461 | opp_overlap 1035689, overlap 1035689 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1090 1034651 - 1035745 + | IS1111A transposase CBU_1090a 1036014 - 1035742 - | hypothetical protein TERM 1098 1036077 - 1036030 - R 83 -11.7 -3.10343 | gap 2, opp_overlap 1036030, overlap 1036036 1036046 ATACGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATTGTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 1099 1036183 - 1036195 + r 83 -3.3 -5.60993 | AAAAATAATAAAGCC GCTAG CCT CGAGC TTTTTTTCTGCGGGA vacB 1038433 - 1036184 - | ribonuclease R CBU_1092 1038475 - 1038705 + | putative lipoprotein TERM 1100 1038734 - 1038758 + T 86 -7.2 -5.055 | TTTTCCTTTGTTATT CATCTACCTT CCGCA AAGGTTGATG TTTTTTCGCAATTAA CBU_1093 1041788 - 1038729 - | AcrB/AcrD/AcrF family transporter TERM 1101 1040677 - 1040666 - G 72 -3.6 -4.94168 | ACATAAGAAAACAAA CGCC AATA AGCG AGAGCGGAATCGTAA CBU_1094 1042930 - 1041788 - | RND family efflux transporter MFP subunit CBU_1095 1043116 - 1043679 + | hypothetical protein TERM 1102 1043904 - 1043881 - g 71 -2.4 -5.06414 | overlap 1043886 1043900 GTGTCTCAAGAAAAA GCTAACTTTA TTCT TAAAGCCTGC GAAGAGCTGATCGCT TERM 1103 1044420 - 1044409 - g 74 -3.6 -5.03145 | CAATTTGCCAAAAAA GCGG CTGA CCAC ATTGCCGAACTGACG fumC 1043683 - 1045062 + | fumarate hydratase TERM 1104 1045598 - 1045582 - g 77 -9.4 -3.64703 | opp_overlap 1045590 TTTTCTGGATTTAAA CGGCGA GATGG TCGCCG TGGACGGCCATTATT aldC 1045373 - 1046170 + | alpha-acetolactate decarboxylase CBU_1098 1047008 - 1046184 - | hypothetical cytosolic protein TERM 1105 1046813 - 1046832 + g 76 -2.8 -5.22258 | gap 1, overlap 1046816 GGTTCGACCTTTTAG GATCGGCTA ATA TCGCCG-TC TTTTCTTTTGATTTA lepB-1 1047923 - 1047144 - | signal peptidase I CBU_1100 1048361 - 1047933 - | hypothetical protein CBU_1100a 1048457 - 1048627 + | hypothetical protein CBU_1103 1051056 - 1049776 - | Slt family transglycosylase CBU_1104 1051234 - 1052226 + | IS30 family transposase TERM 1106 1052412 - 1052396 - T 74 -3.7 -5.10767 | opp_overlap 1052408, overlap 1052399 TATTGAAGAGAAAAA TCAGC CTCCATT GCTGA TGACGGCCTCTTTCT TERM 1107 1056689 - 1056700 + T 72 -3.6 -5.07567 | TACTTTCTTTTTCTT CCGT TAGG GCGG TTTTTTCCAATATGC CBU_1111 1058139 - 1056925 - | membrane-bound lytic murein transglycosylase A TERM 1108 1057686 - 1057704 + gT 79 -2.5 -5.44119 | GTAATCCATAAACAG GAAAAAT ATAGG GTTTTTC TTTTTTTAAACTCCC CBU_1112 1058474 - 1058109 - | GIY-YIG catalytic domain protein TERM 1109 1058876 - 1058856 - H 71 -3.9 -4.98436 | TCAAGAGGATAAAAA CTGCCGCCA CCA TAACGGAAG TCGAAAGAACGACAC TERM 1110 1059216 - 1059246 + H 87 -4.8 -5.41143 | overlap 1059219 ACCTGTTCACGAGCA TGATCACTGGCATT ACC AATGTCATTGATAA TTTTTTTAGCGCCTC TERM 1111 1060073 - 1060099 + G 79 -6.6 -4.63179 | opp_overlap 1060076, overlap 1060076 ACCGTTTATGGGAAG GAATCATGCCAA TTG TGGGCATGATTG TTTTCGTTATTCTTT TERM 1112 1060076 - 1060096 + G 84 -8.3 -4.38092 | opp_overlap 1060076, overlap 1060073 GTTTATGGGAAGGAA TCATGCCAA TTG TGGGCATGA TTGTTTTCGTTATTC CBU_1115 1059970 - 1060287 + | hypothetical protein ald 1061397 - 1060288 - | alanine dehydrogenase etfA 1062370 - 1061426 - | electron transfer flavoprotein alpha-subunit TERM 1113 1061975 - 1062006 + g 74 -3.6 -5.15634 | opp_overlap 1061975 CTGAACGGTAGCAAT CGCATTGCCGGC ATAGATCG GGCGGCAGTACG TTTTTTCATCGACTA etfB 1063119 - 1062367 - | electron transfer flavoprotein beta-subunit CBU_1119 1063937 - 1063116 - | carboxymethylenebutenolidase TERM 1114 1063672 - 1063685 + g 71 -2.3 -5.06414 | ACATAGCCCAATTCT GCTAG CTGT CGAGC TTTTTCTTCAACAAA TERM 1115 1064901 - 1064934 + G 73 -5.3 -4.60041 | gap 1, overlap 1064902 TCCCACGCTTACTTT TCCCGGTGGAATGCTC ATC GGGTGTTCTGC-GGGA TTTTTAAACGTAGGT CBU_1120 1063960 - 1065585 + | electron-transferring-flavoprotein dehydrogenase TERM 1116 1065613 - 1065588 - T 70 -9.7 -2.52933 | opp_overlap 1065612, overlap 1065587 TTCTAATTTATGAAT CCCCTCTCCCA CAAG CGGGAGAAGGA CGGTTTTTCGGAAGG CBU_1121 1065762 - 1065580 - | hypothetical protein TERM 1117 1065727 - 1065711 - G 74 -6.7 -4.36595 | CAGTTAAATGCAAAA CAATATT TAA AATATTG ACGCTATCCTTCGTT TERM 1118 1066389 - 1066404 + G 75 -4.7 -4.9725 | overlap 1066377 1066374 GAATGGCGGTGCGCC CATGC TCTATT GCATG TTTTTCTATCGCGGT enhA.3 1065790 - 1066551 + | enhanced entry protein cbpA 1066703 - 1067728 + | curved DNA-binding protein CBU_1124 1067731 - 1068051 + | chaperone-modulator protein CbpM TERM 1119 1068064 - 1068079 + T 70 -2.6 -5.05301 | overlap 1068064 1068071 TAAAAAATGACTCAA TCATTA CGGA TGATGA TTTTTATCATTCTTT TERM 1120 1068071 - 1068091 + T 89 -5.5 -5.44721 | overlap 1068064 1068064 TGACTCAATCATTAC GGATGATGA TTT TTATCATTC TTTTTTTAACCTCAT TERM 1121 1069423 - 1069439 + T 91 -13.7 -2.52896 | opp_overlap 1069434 1069435 CGCACACCGTGCGCT GCGCGCT AAA AGCGCGC TGGATTCCCGCCTGC TERM 1122 1069564 - 1069540 - T 93 -7.8 -5.47399 | gap 1 TTAATTTCAAAAAAA CCCCGTCGTGC CCGC GCAGG-CGGGG ACCCAGTGCACGGCG CBU_1127 1070161 - 1069646 - | hypothetical membrane spanning protein TERM 1123 1069759 - 1069786 + g 75 -9 -3.60151 | opp_overlap 1069762, overlap 1069762 TATCTAACACCATAA CAACCGCCAGTC CAGC GGCGGGCGGGTG TTCTAATTTAAAAAG TERM 1124 1069783 - 1069762 - G 72 -7.9 -3.89291 | gap 1, opp_overlap 1069759 1069762 CTAACACCATAACAA CCGCCAGTCC AGC GG-CGGGCGG GTGTTCTAATTTAAA iscU.1 1070520 - 1070161 - | NifU-like N terminal domain protein TERM 1125 1070551 - 1070570 + r 87 -8.6 -4.56775 | TACTTTTGCCTTCAC TGTTTCCC ACAC GGGAGACA TTTTTCGCAAACGAT nifS 1071717 - 1070527 - | cysteine desulfurase TERM 1126 1071465 - 1071455 - G 73 -4.6 -4.84359 | opp_overlap 1071455 TGACGGCGATAAAAA GAGG CAG CCCC TTTAAGGGCAAGGTT CBU_1130 1073783 - 1071714 - | OPT family oligopeptide transporter TERM 1127 1071755 - 1071745 - G 71 -8.2 -3.82864 | overlap 1071741 ACGTAATAAAACCAA GCGC AGA GCGC TAAAAATACAATCAC TERM 1128 1072680 - 1072663 - G 76 -4.1 -5.1361 | ACAAAGGCTAAAAAA TTCCCCG ATCC CAGGAAA TTAGCTTCTCGAAAA CBU_1131 1074496 - 1073774 - | RNA methyltransferase TERM 1129 1074243 - 1074258 + g 71 -10.4 -2.70932 | AGCGGCCATGGCAGT GTGCGC GAGC GCGCAC TGGTTCCAAAAACGA TERM 1130 1074428 - 1074400 - G 72 -5.4 -4.49556 | gap 1, overlap 1074402 GTTTTACTAAATAAA GTCT-TGAAAACC CCAT GGTTTTCATAGCC CTCGCCGCTGCCCCG TERM 1131 1074556 - 1074537 - H 73 -7.8 -3.95584 | overlap 1074532 CTTTCATGAAGGAAA CGCACAGG CGCG CGTGTGCG TTAGGCCTCGCCTGC CBU_1132 1074591 - 1074689 + | hypothetical protein TERM 1132 1075237 - 1075224 - g 70 -9.5 -2.90813 | opp_overlap 1075224 1075223 1075215, overlap 1075221 TATTTCCTCAAACCA GCGGC GTTC GCCGC GCCGGTGCCGCTGCC suhB 1074686 - 1075489 + | myo-inositol-1(or 4)-monophosphatase CBU_1134 1076016 - 1075561 - | hypothetical membrane associated protein TERM 1133 1076155 - 1076143 - g 71 -4.9 -4.58395 | opp_overlap 1076143 CGTATTGCCCAAAAA CTAAT GAA ATTAG TTATCAAGTGAATAA CBU_1135 1076067 - 1076501 + | hypothetical protein CBU_1136 1079798 - 1076664 - | enhanced entry protein enhC, tetratricopeptide repeat family TERM 1134 1077111 - 1077130 + g 77 -5 -5.00616 | opp_overlap 1077111 TTTTTCATAGTACAA TCGAGCTT TATT AAGATCGA TTTTTTGCGCAACGC TERM 1135 1077507 - 1077518 + g 77 -2.2 -5.41143 | AGCGGGCACGTAATT TTGG GCAG CCGA TTTTTTTAACCAATC TERM 1136 1078019 - 1078029 + g 76 -4 -5.08255 | CTAACATAAATTGTG CAAT AGC ATTG TTTTGTTTTGAAAGT TERM 1137 1078058 - 1078074 + g 70 -6.5 -4.21607 | GTTTTTCTAAAATTT CGGCTGA TTT TCGGCTG TTTCTATTAACTCCG TERM 1138 1078420 - 1078432 + g 77 -4.9 -4.92757 | opp_overlap 1078420 TTCGCCCTATCAAAG TTCTT GAA AAGAA TTTTATTATTGCTAG TERM 1139 1079775 - 1079764 - G 93 -3 -5.86332 | CTAATTGAAAAAAAA CTTA ACGT TAAG ATAAAAACAGCTATT enhB.2 1080349 - 1079795 - | enhanced entry protein enhA.4 1081098 - 1080352 - | enhanced entry protein TERM 1140 1081344 - 1081375 + r 72 -9.4 -2.96722 | opp_overlap 1081335, overlap 1081343 GTCAAATGCTGCAAT TGCCTAGCCACCCT GATA AGGGTAGCTAGGGG CTTTCTACATCTAAC CBU_1138a 1081538 - 1081386 - | hypothetical protein CBU_1139 1081747 - 1081610 - | hypothetical membrane associated protein TERM 1141 1082087 - 1082077 - R 71 -6.8 -4.04397 | overlap 1082075 ACTGTTAGAAAAACA GCTC TCT GAGC AATTCCCTCTCCCTC TERM 1142 1082932 - 1082946 + r 70 -7.8 -3.63073 | overlap 1082923 AAGCTGCCACTGAGT CTCACC AGC GGTGGG TTCTTCACCAATCTA TERM 1143 1083002 - 1082988 - R 71 -4.2 -4.86773 | overlap 1082990 CAAAACGAGGAAAAA CAGGAA AGT TTCCAG AAAAATGGTGCCCGT TERM 1144 1083023 - 1083008 - R 70 -3.2 -4.84017 | AAGTTTCCAGAAAAA TGGTGC CCGT GCATCA CAAAATAAGACAACG secF 1084027 - 1083113 - | preprotein translocase subunit SecF secD 1085895 - 1084027 - | protein translocase subunit TERM 1145 1084152 - 1084128 - G 76 -5.7 -4.86731 | overlap 1084130 CCCGTGTAAAGAAAA TCGCTGTCACC ATC GACGACAACAA ACCAATAGTCGTCGT TERM 1146 1085665 - 1085610 - G 74 -10.6 -2.83788 | gap 1, overlap 1085609 1085612 ATGCAACGGAATAAT CAGTACCAACGA-CAGCCTGAATCACA TCC TGCGCTTTAAGCTGATCTTCGGTACTG GGAAAGCGAACCAAA yajC 1086261 - 1085911 - | protein translocase subunit TERM 1147 1086198 - 1086185 - G 75 -5.2 -4.75372 | overlap 1086186 1086187 AGCATGGACCAAAAA CCGC CCGGAT GCGG CGCTTGAGCTGTGAC CBU_1144 1086641 - 1086288 - | hypothetical membrane associated protein CBU_1145 1086677 - 1086784 + | hypothetical protein TERM 1148 1086937 - 1086890 - f 72 -9.5 -3.09516 | gap 2, opp_overlap 1086890 GCCCGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATCT CATCTATCGTCCCCGTATTTCGC TTCGCTCATACGTAT TERM 1149 1087562 - 1087543 - f 71 -5 -4.64763 | overlap 1087545 TCATGCAAAAAATAA TTGGCTTT CACT AAAGCCCA TATAAATCCCGCCGC TERM 1150 1088874 - 1088888 + F 79 -8.5 -3.99374 | opp_overlap 1088873 TTTTTTCCAGCACAT GCGCC GATAA GGCGC TTCTTGTTCATCGGG TERM 1151 1089242 - 1089269 + F 82 -6.4 -4.8622 | gap 1, overlap 1089245 CCGGTTTAAGGAGTA TTTTCGG-GCAAT ACA ATTGCGCCGATAA TTTTTGATTGAACCA TERM 1152 1090010 - 1089979 - f 100 -5.2 -5.75342 | gap 1, opp_overlap 1089979 TTTCTTCAAAAAAAA GCAGGC-AGATCC GATTCGA GGATTTTGCCTGC TTTGTTTACGTAGAT TERM 1153 1089979 - 1090010 + F 78 -7.4 -4.46514 | gap 1, opp_overlap 1089979 TTTCTTCAAAAAAAA GCAGGC-AGATCC GATTCGA GGATTTTGCCTGC TTTGTTTACGTAGAT TERM 1154 1090626 - 1090611 - g 70 -9 -3.14344 | CATTGCCTCGATGAA TTCGCC CAAG GGCGAA CCCCTAACCCGGACG trmU 1090311 - 1091426 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1155 1092762 - 1092779 + G 91 -9.9 -4.77165 | TTGGCCTTACTATCG CGCCTTT GGAT AAAGGCG TTTTATTATCCAGCC TERM 1156 1093171 - 1093157 - g 79 -2.8 -5.41787 | GAAAAAACACAAAAA CATATC CGT GATGTG GCGGCCGAATTATTA mfd 1091438 - 1094911 + | transcription-repair coupling factor CBU_1151 1096495 - 1095758 - | HAD superfamily hydrolase TERM 1157 1096765 - 1096781 + G 79 -2.9 -5.40072 | CCAGATCATCGCTCG CGGGGAT GAA ATTACCG TTTTTTTAAAAAACA TERM 1158 1096825 - 1096810 - g 70 -9 -3.15324 | opp_overlap 1096809 1096812, overlap 1096809 CACTGTCACCAAAAT GAAGGG TGAC CCCTTC CATCATCTACGCCGT trpE 1096631 - 1098022 + | anthranilate synthase component I TERM 1159 1099089 - 1099102 + F 73 -2.4 -5.27335 | opp_overlap 1099089 TAAAAATTTTTTAAA CGAA CGCGGA TTCG TTTTTCTTTACGCGC TERM 1160 1099536 - 1099546 + F 72 -4.6 -4.68593 | ACCATTATTTTCAAT GCGG GGG TCGC TTTTTACCTGATGAA TERM 1161 1099774 - 1099762 - g 76 -2.7 -5.26875 | CTTTCAACTAAAAAA TCCTT TAA AAGAA TAATTTCTTCTACGC trpC 1099660 - 1100433 + | indole-3-glycerol phosphate synthase TERM 1162 1100789 - 1100764 - g 73 -2.5 -5.06414 | gap 1, opp_overlap 1100750 CTCCGTTAATAAAAA CGG-GTCGATTT TAA AAGACGACGCCG GAGGGCTTGAGCATC trpBF 1100426 - 1102228 + | bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta trpA 1102245 - 1103048 + | tryptophan synthase subunit alpha CBU_1157 1103746 - 1103045 - | putative lipoprotein TERM 1163 1104020 - 1104038 + G 76 -3.9 -5.04987 | AACAGCGCTAGCTGT TCTTTTC ACGCA GAAAGGA TTTTTTACCACTCTT TERM 1164 1104860 - 1104846 - g 82 -7.2 -4.59773 | GCGCAGCGCCAAAAA GTTAGA GCC TCTAAC GGTAATTGTAAAATT CBU_1158 1103871 - 1105238 + | sterol delta-7-reductase CBU_1159 1105255 - 1105392 + | hypothetical cytosolic protein TERM 1165 1105678 - 1105688 + F 79 -5.4 -4.87892 | opp_overlap 1105678 TTTTTGGCAAAATCA GAAG ATG CTTC TTTCTTTTCTTGAAA TERM 1166 1106377 - 1106391 + G 89 -8.6 -4.82678 | opp_overlap 1106367 TAGTATCGAAGGTTT TAGTCC TTC GGACTA TTTTAATTTTTATGA TERM 1167 1106811 - 1106789 - g 73 -4.8 -4.60889 | AATTATTTTGAAAAA GCACTCGAAT TCA ATCCAAGAGC TAAAACGGCGAAGAA CBU_1160 1105682 - 1106857 + | TPR domain-containing protein CBU_1161 1106926 - 1107018 + | hypothetical protein CBU_1162 1108688 - 1107357 - | transporter, MFS superfamily TERM 1168 1108356 - 1108346 - G 80 -6.8 -4.81523 | AAGCAAAAATGAAAA CACC CAG GGTG CCGATGATTGAAGCA TERM 1169 1108749 - 1108783 + H 80 -7.9 -4.323 | gap 1, opp_overlap 1108751 1108767, overlap 1108750 1108751 ACAAATACCTTATTG AATGG-GCGACGTCAA TGAC TTGACGTCGCTCCAAG TTTTCGGTCTTTCAA TERM 1170 1108750 - 1108782 + H 82 -11.4 -3.18657 | gap 1, opp_overlap 1108751 1108767, overlap 1108749 1108751 CAAATACCTTATTGA ATGG-GCGACGTCAA TGAC TTGACGTCGCTCCAA GTTTTCGGTCTTTCA TERM 1171 1108751 - 1108781 + H 95 -14.9 -2.50471 | gap 1, opp_overlap 1108751 1108767, overlap 1108750 1108749 AAATACCTTATTGAA TGG-GCGACGTCAA TGAC TTGACGTCGCTCCA AGTTTTCGGTCTTTC TERM 1172 1108781 - 1108751 - H 100 -14.9 -3.08187 | gap 1, opp_overlap 1108751 1108750 1108749, overlap 1108767 AAATACCTTATTGAA TGG-GCGACGTCAA TGAC TTGACGTCGCTCCA AGTTTTCGGTCTTTC TERM 1173 1109537 - 1109526 - H 70 -3 -5.10077 | AAATAGCGTAAAAAA CAAT ATTA ATTG CAGCCGTTAAATCTG TERM 1174 1110274 - 1110250 - H 74 -5.1 -4.82756 | opp_overlap 1110250 AGACAAGCAACAAAA TTGAAAAGC GCACTAT GCCTTTCAA TGGTCTGACCAACAT TERM 1175 1112839 - 1112864 + G 76 -6.1 -4.58685 | AAAGTGAAGGCTACT TGCGCATTGAG CGTA CTAAAGGCGCA TTTTTACGGCAATTT CBU_1169 1112550 - 1113005 + | HSP20 family protein TERM 1176 1113049 - 1113031 - f 89 -10.3 -4.30719 | opp_overlap 1113031 CTTCCCTATAATAAA TACCCCC CACGC GGGGGTA TTTTTTTATTTAAAA TERM 1177 1113031 - 1113049 + F 100 -10.3 -5.95539 | opp_overlap 1113031 CTTCCCTATAATAAA TACCCCC CACGC GGGGGTA TTTTTTTATTTAAAA CBU_1170 1113154 - 1113360 + | hypothetical membrane associated protein TERM 1178 1113410 - 1113431 + T 100 -14.5 -4.18494 | GGGGAATGCGCGTAG GGGTCGGAA GTCT TTCCGACCC TTTTAGCTACCCATA CBU_1171 1113886 - 1113434 - | hypothetical protein CBU_1173 1115568 - 1115936 + | hypothetical protein TERM 1179 1116393 - 1116373 - T 72 -8.3 -3.54129 | opp_overlap 1116365 1116373 GACAGTTTCGCCAAA GCCGATAAT TCC AATATCGGC TTCGTGATCGAAATA CBU_1175 1117749 - 1116436 - | hypothetical membrane spanning protein TERM 1180 1117263 - 1117253 - G 74 -5.4 -4.68451 | AAAAATAAGAATAAA TTCG CGC CGAA AAGCGTTGGCCGGAT phrB 1117997 - 1119415 + | deoxyribodipyrimidine photolyase CBU_1177 1119625 - 1119443 - | hypothetical cytosolic protein TERM 1181 1119677 - 1119643 - H 79 -8.6 -4.08692 | opp_overlap 1119655 GAATCCCGGCTAAAA GCCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGGTCC TERM 1182 1119655 - 1119665 + H 76 -4.6 -5.06414 | opp_overlap 1119643 AAAGCCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC TERM 1183 1120572 - 1120546 - g 71 -8.8 -3.54424 | overlap 1120562 GCTGATCTTTGCAAA TTCTATCTCGCT AAC AGCGAGCTAAAA AATGCCCGCTGGGCT TERM 1184 1120587 - 1120575 - g 77 -4.7 -5.09895 | opp_overlap 1120576, overlap 1120562 1120576 CAGCGAGCTAAAAAA TGCCC GCT GGGCT TATTTTCAAATTCCC TERM 1185 1120576 - 1120586 + G 76 -8.2 -4.21933 | opp_overlap 1120562 1120576 1120575 AGCGAGCTAAAAAAT GCCC GCT GGGC TTATTTTCAAATTCC CBU_1178 1120012 - 1121145 + | hypothetical protein TERM 1186 1121275 - 1121296 + G 76 -5.7 -4.84527 | GATGTGTACGTGCCA GCGGTGCCG CATA TGGCGACGC TTTTTCATGTGTCCG TERM 1187 1121400 - 1121415 + G 86 -3.2 -5.49729 | gap 1 TTCCGATCAGTATGG GC-GGCG ACG CGTCAGC TTTTTTTCAATAGTT TERM 1188 1121666 - 1121678 + G 88 -4.1 -5.52347 | TCGATGTTCATTTGG GTTGG CAA TCAAC TTTTTTAATTTTATT TERM 1189 1122197 - 1122231 + G 81 -2 -5.54907 | gap 1, opp_overlap 1122196 1122194, overlap 1122194 1122197 1122202 1122204 1122205 CTTTCGGAGATACAG CCGGCGCG-GCCGCT GCTTTA AGCGGCTCTTTTCGG TTTTTATTTTCTGCC TERM 1190 1122205 - 1122222 + G 75 -8.4 -3.83717 | opp_overlap 1122196 1122194, overlap 1122197 1122194 1122202 1122204 1122197 GATACAGCCGGCGCG GCCGCT GCTTTA AGCGGC TCTTTTCGGTTTTTA TERM 1191 1122293 - 1122310 + G 76 -4.1 -5.04868 | gap 1, opp_overlap 1122287, overlap 1122295 TCTCATCAACATTGC CA-CTGGC TTT GCCGGCTG TTTTATTTAGTTTAG CBU_1179 1121188 - 1122384 + | Bcr/CflA subfamily drug resistance transporter CBU_1180 1122535 - 1122404 - | hypothetical protein thiI 1123752 - 1122574 - | thiamine biosynthesis protein ThiI TERM 1192 1123622 - 1123611 - G 72 -5.8 -4.46233 | TTAATTGTAAATAAA GTCG GCCA CGAC ACTGTTCAATAGGGG iscS 1124895 - 1123753 - | aminotransferase, class V CBU_1183 1125097 - 1125450 + | nucleic acid binding domain-containing protein TERM 1193 1125502 - 1125473 - T 75 -9.4 -3.28712 | opp_overlap 1125477, overlap 1125477 TCTCCTTTCCCACAA CAAAGCGAGGAA ATAAAA CTCCTCGCTTTA CTTAAAAGGATGGAA TERM 1194 1125498 - 1125477 - T 77 -8 -4.30719 | opp_overlap 1125477, overlap 1125473 CTTTCCCACAACAAA GCGAGGAA ATAAAA CTCCTCGC TTTACTTAAAAGGAT TERM 1195 1125477 - 1125498 + T 71 -7.3 -3.90291 | opp_overlap 1125473 1125477 CTTTCCCACAACAAA GCGAGGA AATAAAAC TCCTCGC TTTACTTAAAAGGAT CBU_1184 1126249 - 1125521 - | acyltransferase TERM 1196 1126114 - 1126140 + g 72 -3.1 -4.95487 | CTTTGTGCTCTTTCT TCAGAAAGC CCCGAAATT GTTTTCTGA TTTTGTGTTTGTTTT uvrC 1128181 - 1126352 - | excinuclease ABC subunit C TERM 1197 1128469 - 1128451 - H 72 -10.2 -2.60257 | overlap 1128448 1128447 AGAGGCGAGAACCCA GGCGCACC TTC GGTGCGCT GCACACGTGTGCGCT TERM 1198 1129688 - 1129674 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 1199 1129750 - 1129730 - g 71 -2.4 -5.10461 | opp_overlap 1129731, overlap 1129731 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1186 1128693 - 1129787 + | IS1111A transposase CBU_1186a 1130056 - 1129784 - | hypothetical protein TERM 1200 1130125 - 1130068 - H 100 -20.4 -3.21354 | gap 2, opp_overlap 1130073 1130108, overlap 1130079 1130089 CCATATACGTATGAA GCGAAGCGAAATACGGGAA-AACA-ATG ATGT CATCTATTGTCCCCGTATTTCGCTTCGC TGCATACGGGCTACT TERM 1201 1130219 - 1130229 + G 71 -2.4 -5.06816 | opp_overlap 1130219 1130207, overlap 1130205 AGAGGCTGAGAAAAG CCCC ATC GGTG TTTTTCTTAACCCCT CBU_1186b 1130104 - 1130247 + | hypothetical protein TERM 1202 1130670 - 1130651 - g 77 -4.3 -5.08824 | overlap 1130652 GGTGCAGTCAAAAAA CCGATCA TGACTT TGATCGA CTTCAAGCAGCCTTC CBU_1187 1130465 - 1131112 + | hypothetical protein serS 1132380 - 1131109 - | seryl-tRNA synthetase TERM 1203 1131142 - 1131177 + g 100 -17.6 -3.37935 | overlap 1131145 ACCCATGTAGGACTT CAAGGCGTCGGGCACA CGAA TGTGCCCGTCGGCTTG TTGATAGTTTTCCAT TERM 1204 1131145 - 1131174 + g 100 -13.5 -3.81516 | overlap 1131142 CATGTAGGACTTCAA GGCGTCGGGCACA CGAA TGTGCCCGTCGGC TTGTTGATAGTTTTC TERM 1205 1132177 - 1132188 + g 80 -7.2 -4.55128 | AGCCATTAAGAGTTC GGGG TTTT CCCC TTTTGATTTCGCCAT TERM 1206 1132200 - 1132211 + g 73 -4.4 -4.81685 | CCCCTTTTGATTTCG CCAT TCCA ATGG TTTTTGATAATTGGT CBU_1189 1133739 - 1132456 - | ATPase, AAA family lolA 1134397 - 1133762 - | outer-membrane lipoproteins carrier protein TERM 1207 1134194 - 1134182 - G 78 -10.5 -3.64703 | GGTTTCCCAGCGAAA GCGCC CCG GGCGC ATAATCATGACCCGT ftsK 1136766 - 1134409 - | FtsK/SpoIIIE family protein TERM 1208 1134985 - 1135013 + g 77 -7.4 -4.3179 | AATACCAGCCGCCCG CGCTTTTTGCGC CAAAC GCACAATAAGCG TTTCTACTTTTTTCC TERM 1209 1135266 - 1135256 - G 71 -8.2 -3.80189 | opp_overlap 1135256 1135255 1135253 ACACACCAACGCAAA GCGG CCG CCGC ATCTTTCATATCGGT TERM 1210 1135909 - 1135929 + g 72 -9.9 -3.22476 | TAATATGGCTGAGCC TTTAAAACG CGG CGTTTTAAA TTCATGATCGATAAT TERM 1211 1136097 - 1136087 - G 74 -5.4 -4.63044 | AGCGATAGAAATAAA TCCT TCC AGGA AATAGCACCCAATCG TERM 1212 1136681 - 1136642 - G 71 -4.2 -4.75063 | overlap 1136655 AGAAAAGCCGAAAAA GCCAGCGCCAAAATGAAG CAAC CTTCACGTAGGCGATAAC GCAAATGGCGCCGTA TERM 1213 1137095 - 1137105 + G 74 -4 -4.92756 | AGCACGCGGAGCGCC TTGA TAC TCAA TTTATTTTTGATCAT trxB 1136869 - 1137831 + | thioredoxin-disulfide reductase TERM 1214 1138791 - 1138777 - g 72 -7.2 -4.10453 | opp_overlap 1138777 TAAATTCTTCCAAAA TCGTTT ACA AAACGA TTCCCTCATCATTGG CBU_1194 1137857 - 1139293 + | hypothetical membrane spanning protein infA 1139355 - 1139606 + | bacterial protein translation initiation factor 1 (IF-1) clpA 1141930 - 1139669 - | ATP-dependent Clp protease ATP-binding subunit ClpA TERM 1215 1139810 - 1139823 + g 83 -3.7 -5.32944 | opp_overlap 1139800, overlap 1139811 AATAAGCCGCGCCAT GGGGC GAGC GCCCA TTTTTTCGTTATAGC TERM 1216 1140459 - 1140449 - G 74 -3.2 -5.06414 | TCCCGCTAATAAAAA CGAT CCT ACCG GCTTATCTGCATTAT CBU_1197 1141963 - 1142163 + | hypothetical membrane associated protein CBU_1198 1142253 - 1142789 + | hypothetical cytosolic protein CBU_1199 1142823 - 1142921 + | hypothetical protein icd 1144244 - 1142958 - | isocitrate dehydrogenase TERM 1217 1143631 - 1143649 + g 83 -7.4 -4.86731 | overlap 1143632 TTAATCCCTATCCCC GCCGTTTC CGG GAAACGGA TTTTCTTTACGCCCA TERM 1218 1143632 - 1143648 + g 81 -10.9 -3.51557 | overlap 1143631 TAATCCCTATCCCCG CCGTTTC CGG GAAACGG ATTTTCTTTACGCCC queA 1145319 - 1144288 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1219 1145697 - 1145719 + G 72 -7 -4.25256 | GCTTTTTGTAATGTC GCCTTTATGG CTT CTATAATGGC TTATTTTGATCAACG CBU_1202 1145436 - 1146287 + | hypothetical membrane spanning protein CBU_1203 1146351 - 1148003 + | glutamate synthase domain protein TERM 1220 1149065 - 1149080 + G 89 -11.8 -3.57462 | opp_overlap 1149076 GCTTTCAGGCGTTCG GGCGGG ACAA CCCGCC TTTGACGATGAAGTA CBU_1204 1148007 - 1149383 + | succinate-semialdehyde dehydrogenase CBU_1206 1150863 - 1149484 - | delta(24(24(1)))-sterol reductase TERM 1221 1150054 - 1150035 - G 78 -5.8 -5.00884 | ATTTTTCGTAAAAAA TATCCCAA GTCG TTGGAATA CATTCTTCGCCTTTC CBU_1207 1151033 - 1150881 - | hypothetical protein TERM 1222 1151172 - 1151158 - H 81 -2.8 -5.64421 | overlap 1151131 AGCTTAAACAAAAAA GTGC GGCCTTG GCAC GATTGTCGTGTAGGA CBU_1208 1151258 - 1152496 + | major facilitator transporter CBU_1209 1154050 - 1152509 - | hypothetical membrane spanning protein TERM 1223 1155490 - 1155500 + H 81 -5.4 -5.11881 | AACGCCTGGGCTTAT TTGC GAG GCAA TTCTTTTTTTTGTTT TERM 1224 1155623 - 1155650 + H 79 -5.5 -4.95806 | opp_overlap 1155624, overlap 1155624 CCCTCTAACACAGTA ACACGCTGTCG TCGATT CCACAGCGTGC TTTTTGTAATGATTT TERM 1225 1155649 - 1155624 - H 72 -9 -3.37493 | opp_overlap 1155623 1155624 CCTCTAACACAGTAA CACGCTGTCG TCGATT CCACAGCGTG CTTTTTGTAATGATT TERM 1226 1155624 - 1155649 + H 74 -9 -3.55857 | opp_overlap 1155624, overlap 1155623 CCTCTAACACAGTAA CACGCTGTCG TCGATT CCACAGCGTG CTTTTTGTAATGATT TERM 1227 1156375 - 1156387 + H 72 -3.3 -5.08824 | overlap 1156372 1156370 1156379 CACCGTAACGCGCTG TCCTC GCA GTGGA TTTTTTCGATACCAC TERM 1228 1156597 - 1156622 + H 83 -5.3 -5.31877 | gap 1, opp_overlap 1156599, overlap 1156599 CTGCTAACACCGTAA CACGCTGTCGTC GTT GTCG-CAGCGCG TTTTTTATAATGGCT TERM 1229 1156898 - 1156924 + G 71 -5 -4.51994 | opp_overlap 1156913, overlap 1156913 CTACCAAAGCCGTAG CCCGTATGGAGC GAA GCGAAATACGGG TTTGTTATTGCTTCC TERM 1230 1156913 - 1156949 + G 71 -9.6 -3.07816 | opp_overlap 1156913, overlap 1156898 1156938 CCCGTATGGAGCGAA GCGAAATACGGG TTTGTTATTGCTT CCCGTATTTCGC TTCGCTCCATACGGG TERM 1231 1156949 - 1156913 - g 71 -9.6 -3.07816 | opp_overlap 1156898 1156913 1156938 CCCGTATGGAGCGAA GCGAAATACGGG TTTGTTATTGCTT CCCGTATTTCGC TTCGCTCCATACGGG CBU_1212a 1156864 - 1157028 + | hypothetical protein TERM 1232 1158356 - 1158321 - g 79 -7 -4.65895 | opp_overlap 1158322 1158329 1158350, overlap 1158322 1158328 1158329 GCGCGCACTCAAAAA CCAAAAACGCTAAAGT TATT ACTTCAGCATTTTCGT TGTCGAGAATCAATT TERM 1233 1158355 - 1158322 - g 76 -10.5 -3.39216 | opp_overlap 1158322 1158329 1158350, overlap 1158321 1158328 1158329 CGCGCACTCAAAAAC CAAAAACGCTAAAGT TATT ACTTCAGCATTTTCG TTGTCGAGAATCAAT TERM 1234 1158349 - 1158328 - g 83 -5.9 -5.18355 | opp_overlap 1158322 1158329, overlap 1158322 1158321 1158329 CTCAAAAACCAAAAA CGCTAAAGT TATT ACTTCAGCA TTTTCGTTGTCGAGA TERM 1235 1158729 - 1158741 + G 70 -10.5 -2.60723 | overlap 1158728 AAGTTCACTTCCTTT GCGCC ATC GGCGC CTTCGTTCCCGCTCA CBU_1213 1157067 - 1159040 + | ankyrin repeat-containing protein TERM 1236 1159146 - 1159132 - g 79 -2.8 -5.40072 | TTTTTGGGAAAAAAA CAAAGT ACT ACTTGG AAAAGCTTAGAAAAG CBU_1214 1159107 - 1159244 + | hypothetical cytosolic protein CBU_1216a 1161326 - 1161192 - | hypothetical protein CBU_1217 1161602 - 1163095 + | hypothetical membrane spanning protein TERM 1237 1164345 - 1164331 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 1238 1164407 - 1164387 - g 71 -2.4 -5.10461 | opp_overlap 1164388, overlap 1164388 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1217a 1163350 - 1164444 + | transposase TERM 1239 1164692 - 1164749 + T 73 -9.5 -3.1505 | gap 3 TCCATATACGTATGA GCGAAGCGAAATACGGG--GACGATAGA CGACA TC-ATTGTTTTCCCGTATTCCGCTTCGC TTCATACGGGCTACT CBU_1219 1165916 - 1164798 - | hypothetical cytosolic protein TERM 1240 1164860 - 1164824 - G 100 -14.7 -4.04209 | opp_overlap 1164824 1164829, overlap 1164827 CTAAATCATTAGAAA GAACACTTGAGTTCTCT TGA AGAGAATTCAAATGTTC AGCATAAAAATGTTG TERM 1241 1164857 - 1164827 - G 86 -10.6 -4.12857 | opp_overlap 1164824 1164829, overlap 1164824 AATCATTAGAAAGAA CACTTGAGTTCTCT TGA AGAGAATTCAAATG TTCAGCATAAAAATG purC 1166639 - 1165917 - | phosphoribosylaminoimidazole-succinocarboxamide synthase CBU_1221 1167232 - 1166639 - | putative lipoprotein dapA 1168142 - 1167249 - | dihydrodipicolinate synthase kdgK 1169284 - 1168355 - | 2-dehydro-3-deoxygluconokinase TERM 1242 1168404 - 1168420 + g 89 -9.4 -4.57837 | opp_overlap 1168392 TAAGCGACCACGGTA GCCGCT AAATG AGCGGC TTTTTGGGAGGCTGT TERM 1243 1169011 - 1169031 + g 73 -8.9 -3.53012 | opp_overlap 1169012, overlap 1169012 TACGAATTAAATATA ACCCCGGCA ACT TGTCGGGGA TTTGGCGAACCAGGG TERM 1244 1169030 - 1169012 - G 82 -10.2 -3.90901 | opp_overlap 1169011 1169012 ACGAATTAAATATAA CCCCGGCA ACT TGTCGGGG ATTTGGCGAACCAGG TERM 1245 1169012 - 1169030 + g 82 -12.4 -2.71712 | opp_overlap 1169012, overlap 1169011 ACGAATTAAATATAA CCCCGGCA ACT TGTCGGGG ATTTGGCGAACCAGG TERM 1246 1170087 - 1170077 - g 74 -4 -4.93968 | overlap 1170070 ATCCACAACGAAAAA CTTT CGG AAAG CGAGCGGGCGCAAGC CBU_1224 1169324 - 1170604 + | RmuC family protein TERM 1247 1170668 - 1170684 + T 100 -12.3 -5.21709 | opp_overlap 1170668 GGAAAAAACAAAAAA GCCAGGT AAA ACCTGGC TTTTTTGCTATAAAA TERM 1248 1170684 - 1170668 - T 100 -12.3 -6.04324 | opp_overlap 1170668 GGAAAAAACAAAAAA GCCAGGT AAA ACCTGGC TTTTTTGCTATAAAA CBU_1224a 1170906 - 1170709 - | hypothetical protein CBU_1225 1171925 - 1171017 - | haloalkane dehalogenase TERM 1249 1171841 - 1171817 - G 76 -5.8 -4.83615 | overlap 1171820 TACCGTGGATAAAAA GA-ACCGGCTCA CCT TG-GCCGGTCTC AATATAGTGCATCTT TERM 1250 1171837 - 1171820 - G 82 -7.7 -4.52873 | gap 1, overlap 1171817 CGTGGATAAAAAGAA CCGGCTCA CCT TG-GCCGG TCTCAATATAGTGCA CBU_1226 1176802 - 1171922 - | putative glutamate dehydrogenase, NAD-specific TERM 1251 1172965 - 1172941 - G 75 -4.3 -4.92385 | overlap 1172942 TATAGGCAAATAAAA CGCTTAACTCA GGT CGAGTTAAACC AAGACCGAGCGCACG TERM 1252 1177524 - 1177514 - g 76 -8.2 -4.18697 | opp_overlap 1177511 1177514 AAAATTACTGGAAAA CGCG GGG CGCG TCATTTCACGAGAAC qseB 1176990 - 1177688 + | transcriptional regulatory protein qseC 1177685 - 1179121 + | sensor protein qseC TERM 1253 1179817 - 1179838 + G 70 -5.9 -4.30978 | opp_overlap 1179822 CCCATTTAAAGCTAC CCAAACAAA TAAT TTTGATTGG TTTTGATGAATTAGC TERM 1254 1181231 - 1181220 - g 80 -7.2 -4.54253 | AAACCATTAAATAAA CCCC ATAC GGGG CTAAACGGGATAGAG CBU_1229 1179351 - 1181939 + | ATP-dependent nuclease subunit B TERM 1255 1182204 - 1182187 - g 76 -5.5 -4.84359 | TGACTCCCACAAAAA GCTTACG TGGA CGTTAGC CAGAAAAGTTATCGA TERM 1256 1182918 - 1182907 - g 77 -2.2 -5.38326 | TCAATTAAATAAAAA CGAA AAGC TCCG ACTGGCGTTGAACGA TERM 1257 1183423 - 1183393 - g 83 -4 -5.40072 | opp_overlap 1183399, overlap 1183402 TCGCTCTCAAAAAAA TTTAATCGATTGGT TTA ACCAAACGTTTGAA CCCACTTTTCCCAAA CBU_1230 1181936 - 1185268 + | ATP-dependent nuclease subunit A TERM 1258 1185348 - 1185358 + T 70 -5.4 -4.44748 | CAATTAGGCGTTCAT TTGC TTT GCAA TTATTTTGATTTTGT CBU_1231 1186112 - 1185414 - | hypothetical membrane associated protein TERM 1259 1185984 - 1185998 + g 100 -5.6 -5.77853 | ATATTTTTTTCCAGC GGAGGG AAG CACTCC TTTTTTTTCAAGGTT TERM 1260 1186301 - 1186337 + H 93 -13.7 -3.23692 | opp_overlap 1186294 ATCCAACATCTCATA GGTAGCCCGTATTCCGC TTC GCTTCATACGGGCTACC TTAATAATGATGATG TERM 1261 1186788 - 1186814 + G 87 -5.1 -5.4505 | gap 1 ACGTGAGAAAAGCTT TAGAGGCCGGTC ACGC GGC-GGCCACTA TTTTTTCTTCCGCAA TERM 1262 1186873 - 1186883 + G 77 -4.6 -5.07652 | overlap 1186860 1186859 TCGCATTGCCTTTGA TGGC GAT GCCG TTTTATTTTCAGACG CBU_1233 1186391 - 1187293 + | 5'-nucleotidase TERM 1263 1188176 - 1188193 + G 100 -2 -5.95539 | opp_overlap 1188176, overlap 1188177 1188185 CGGTAGCCGATTATA TCTCTT ATTTAA AAGAGG TTTTTTTATTTGACG TERM 1264 1188385 - 1188372 - g 75 -5.3 -4.788 | AAAGCAACGCAAAAA GGAAA TTTA TTTCC ATCGAAGCCATAAAG CBU_1234 1187356 - 1188642 + | hypothetical ATPase orn 1188801 - 1189352 + | oligoribonuclease CBU_1236 1189529 - 1189621 + | hypothetical protein CBU_1237 1190194 - 1189802 - | PilT domain-containing protein CBU_1238 1190451 - 1190197 - | CopG family transcriptional regulator CBU_1239 1190596 - 1191177 + | hypothetical membrane spanning protein TERM 1265 1191205 - 1191242 + T 100 -23.6 -4.20084 | gap 1, overlap 1191209 GTAATTCTAATTTTG GCATCGTCGTCCCGCGG CTTGA CCGCGGGACGACG-TGC TTTTAGCTGCCTAGT TERM 1266 1191209 - 1191239 + T 100 -24.1 -3.11476 | overlap 1191205 TTCTAATTTTGGCAT CGTCGTCCCGCGG CTTGA CCGCGGGACGACG TGCTTTTAGCTGCCT gcp 1192272 - 1191253 - | O-sialoglycoprotein endopeptidase mdh 1193267 - 1192281 - | malate dehydrogenase TERM 1267 1193456 - 1193431 - R 85 -8.9 -4.21184 | opp_overlap 1193448, overlap 1193428 1193432 1193434 AAGACAGACAAAGAA GCACCTCCGGC TTTA GCCGGAGGTTG GAGAGTTAACTTTCG TERM 1268 1193455 - 1193432 - R 85 -12.4 -3.11084 | opp_overlap 1193448, overlap 1193428 1193431 1193434 AGACAGACAAAGAAG CACCTCCGGC TTTA GCCGGAGGTT GGAGAGTTAACTTTC TERM 1269 1193453 - 1193434 - R 100 -15 -3.09925 | opp_overlap 1193448, overlap 1193428 1193432 1193431 ACAGACAAAGAAGCA CCTCCGGC TTTA GCCGGAGG TTGGAGAGTTAACTT CBU_1242 1194688 - 1193462 - | long-chain fatty acid transport protein precursor TERM 1270 1193737 - 1193725 - G 79 -4.1 -5.26119 | overlap 1193720 TTCCTAAAAAGAAAA TCCAA TTC TCGGA AGGGGCATATCTTCC TERM 1271 1194696 - 1194685 - G 77 -2.2 -5.41359 | opp_overlap 1194692, overlap 1194692 AAGTAAAGGAAAAAA CCAA TATT CTGG CTACAGATCGCTTAG TERM 1272 1195013 - 1195025 + G 77 -6.9 -4.57569 | opp_overlap 1194999, overlap 1195001 1195008 AGACGAACGCGCGCA GGTGC GTT GCGCC TTTTTCCGCAACTAC TERM 1273 1195922 - 1195911 - g 77 -7.2 -4.371 | opp_overlap 1195910 1195911 CTCACCACATTAAAA CGCG GCTA CGCG ATTGTGACGCATCAA xseA 1194822 - 1196066 + | exodeoxyribonuclease VII large subunit TERM 1274 1196653 - 1196639 - g 93 -11.4 -4.37886 | opp_overlap 1196651 TTATTTGCGAGAAAA TCGCGC GGA GCGCGA GAAGATATTCGTCTT CBU_1244 1196063 - 1197598 + | EmrB/QacA family drug resistance transporter CBU_1245 1199069 - 1197738 - | GTP-binding protein EngA TERM 1275 1199303 - 1199279 - R 85 -7 -5.15167 | opp_overlap 1199279 1199282, overlap 1199281 1199282 TACCAGGAATAAAAA TACCCCCGGG CTTGC CCCCGGGGTG TTTTTATTGCGAAAT TERM 1276 1199279 - 1199303 + r 90 -9.2 -5.06816 | opp_overlap 1199279 1199281 1199282, overlap 1199282 TACCAGGAATAAAAA TACCCCCGGG CTTGC CCCCGGGGTG TTTTTATTGCGAAAT TERM 1277 1199301 - 1199281 - R 89 -9.6 -4.19587 | opp_overlap 1199279 1199282, overlap 1199279 1199282 CCAGGAATAAAAATA CCCCCGGG CTTGC CCCCGGGG TGTTTTTATTGCGAA TERM 1278 1199282 - 1199301 + r 95 -12.1 -4.16307 | opp_overlap 1199281 1199279 1199282, overlap 1199279 CAGGAATAAAAATAC CCCCGGG CTTGCC CCCGGGG TGTTTTTATTGCGAA TERM 1279 1199301 - 1199282 - R 83 -12.1 -3.10668 | opp_overlap 1199282 1199279, overlap 1199281 1199279 CAGGAATAAAAATAC CCCCGGG CTTGCC CCCGGGG TGTTTTTATTGCGAA CBU_1247 1199927 - 1199307 - | hypothetical protein TERM 1280 1199773 - 1199762 - G 72 -7.2 -4.06491 | opp_overlap 1199762 1199761 1199765, overlap 1199763 GCAATTGCATATAAA GCGC AGAA GCGC GTTCTGTTTTCTCCA TERM 1281 1199874 - 1199857 - G 70 -9.1 -3.26933 | opp_overlap 1199854, overlap 1199855 ATAGCAAGAGCAATA GCGCGAC CATA ATCGCGC CACCATTTTTTTATC hisS 1201215 - 1199950 - | histidyl-tRNA synthetase CBU_1249 1201823 - 1201212 - | putative DNA-binding protein CBU_1250 1202100 - 1201960 - | hypothetical protein TERM 1282 1202922 - 1202910 - R 75 -7.7 -4.07568 | opp_overlap 1202910, overlap 1202918 TGCGGTGCTCGAAAA TCAGC GAA GCTGA CTCAGCATAGCGAAT CBU_1252 1204062 - 1202950 - | radical SAM protein TERM 1283 1205340 - 1205330 - R 93 -6.8 -5.45802 | overlap 1205331 1205332 CCTTCAAAACAAAAA GGGT GAA ACCC CACTGGAAACTACGG TERM 1284 1205702 - 1205664 - R 71 -4.9 -4.48664 | overlap 1205660 GAAATACACAACAAA TTTTTCAGTAAAAAA GCGCATAAA TTTTTAACTGAAAAA TTAGAGCAGGTCTAC TERM 1285 1206697 - 1206707 + r 76 -4.6 -5.06414 | opp_overlap 1206685 AAAGCTTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC CBU_1255 1207628 - 1206825 - | polyprenyl synthetase family protein CBU_1256 1207660 - 1207776 + | hypothetical protein TERM 1286 1208011 - 1208000 - g 89 -3 -5.75342 | TTTTGCGAAAAAAAA GAAA CGGC TTTC GTCGAATGGGCTTTT CBU_1257 1207769 - 1208173 + | hypothetical cytosolic protein ndk 1208593 - 1208159 - | nucleoside diphosphate kinase nhaP.1 1208729 - 1210327 + | Na+/H+ antiporter TERM 1287 1210864 - 1210876 + G 80 -5.5 -5.1244 | opp_overlap 1210862 1210864, overlap 1210862 AATCATATAATAATA CCAGT GGT GCTGG TTTTTATGTTCGTGG CBU_1260 1210764 - 1211510 + | OmpA-like transmembrane domain-containing protein TERM 1288 1211552 - 1211522 - f 70 -9.1 -3.18134 | opp_overlap 1211530, overlap 1211520 1211524 1211530 CTAAGGAACTTAACA CACAAAAAGGGGC TTCGT GCCCCTTTTTTTA TATTCCCACATACGA TERM 1289 1211550 - 1211524 - f 73 -9.5 -3.14636 | opp_overlap 1211530, overlap 1211522 1211520 1211530 AAGGAACTTAACACA CAAAAAGGGGC TTCGT GCCCCTTTTTT TATATTCCCACATAC TERM 1290 1211544 - 1211530 - f 90 -8.5 -5.10064 | opp_overlap 1211530, overlap 1211524 1211522 1211520 CTTAACACACAAAAA GGGGC TTCGT GCCCC TTTTTTTATATTCCC TERM 1291 1211530 - 1211544 + F 100 -8.5 -5.80817 | opp_overlap 1211524 1211522 1211520 1211530 CTTAACACACAAAAA GGGGC TTCGT GCCCC TTTTTTTATATTCCC TERM 1292 1211626 - 1211638 + G 70 -5.5 -4.41494 | AAGTTTTTACATTCC CGGCT ATC AGCTG TTTTCCTTGCCACTA CBU_1261 1211608 - 1212864 + | D-alanyl-D-alanine serine-type carboxypeptidase CBU_1262 1212861 - 1213124 + | hypothetical protein CBU_1263 1213148 - 1213534 + | hypothetical membrane associated protein TERM 1293 1213749 - 1213772 + F 77 -6.2 -4.60487 | gap 1 AGCTTCCTTCTTCCG GAAATCG-TAT GGA ATATCGATTTC TTTTTCCAACTCCTG TERM 1294 1214155 - 1214130 - f 77 -7.7 -4.2828 | opp_overlap 1214133 CCTTACTCAGTAAAA TAATGACACCA TGAA CGATGTCATTA TTCGCCAGTTAGCTC lipB 1214140 - 1214868 + | lipoyltransferase lipA 1214798 - 1215745 + | lipoyl synthase TERM 1295 1217532 - 1217545 + G 77 -5.2 -4.90917 | overlap 1217526 CAGCTATAAACCGGA GCGG CATTTC CCGC TTTTTCCTTGGCTTT CBU_1267 1215856 - 1217904 + | DedA/PAP2 domain-containing protein scvA 1217948 - 1218040 + | ScvA TERM 1296 1218068 - 1218093 + T 100 -16.3 -2.62735 | overlap 1218057 TAGTTGAGTTGTCGA TTTCCCCCTGA GCTT TCAGGGGGAAA TCCTATAGACCGTAT CBU_1268 1219169 - 1218096 - | pyridine nucleotide-disulphide oxidoreductase CBU_1269 1219667 - 1219176 - | thioesterase family protein TERM 1297 1219753 - 1219810 + G 100 -20.4 -3.21354 | gap 2, opp_overlap 1219753 1219758, overlap 1219764 1219772 CGTAGCCTGTATGAA GCGAAGCGAAATACGGGGACAATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGCTTCGC TTCATACGTATATGG TERM 1298 1219810 - 1219753 - g 100 -16.8 -3.14931 | gap 3, opp_overlap 1219753 1219764 1219772, overlap 1219758 CGTAGCCTGTATGAA GCGAAGCGAAATACGGG--GACAATAGAT GAC ATC-ATTGTTTTCCCGTATTTCGCTTCGC TTCATACGTATATGG CBU_1269a 1219705 - 1220094 + | hypothetical protein CBU_1270 1221185 - 1220091 - | IS1111A transposase TERM 1299 1220128 - 1220148 + g 71 -2.4 -5.10461 | opp_overlap 1220129, overlap 1220129 TCTTGGCGTGTTAAA AGCGCCCA AATGA TCGGCGCA TTTTTATTCGCTAAC TERM 1300 1220190 - 1220204 + g 74 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 1301 1222076 - 1222062 - R 71 -7.2 -3.86897 | TTTATCGGGTATAAA TCGATT AAA AATCGA TAACGCGTAAATTAA TERM 1302 1222180 - 1222198 + r 76 -2.3 -5.42605 | CTATTTAATCCCAGG CGAGCGA TTTTT TCGTACG TTTTGTTTTTATTAA TERM 1303 1222250 - 1222234 - R 93 -11.5 -4.18018 | GCCCCGTACGCAAAA GCGAGCG CAA CGCCCGC AACACCTCGATATAA TERM 1304 1222721 - 1222764 + r 73 -7.6 -3.97042 | gap 1, opp_overlap 1222721, overlap 1222732 CCTCAGAAAAAATCA GCGGCTTTG-CGTTTTCTTTG AGC CAAAGAAAATGTTCAAGGCGC TTTGCTTCCTCGTAC TERM 1305 1222732 - 1222752 + r 72 -9.9 -3.0264 | opp_overlap 1222721, overlap 1222721 ATCAGCGGCTTTGCG TTTTCTTTG AGC CAAAGAAAA TGTTCAAGGCGCTTT CBU_1272 1222977 - 1222861 - | hypothetical protein TERM 1306 1223208 - 1223222 + H 75 -10 -3.08992 | opp_overlap 1223207 1223204 1223203 ATGGCATAAATTCAC CTGCTC CCG GAGCAG TGTGTTGAACTGAAT CBU_1273 1223250 - 1224512 + | 6-phosphofructokinase CBU_1274 1224996 - 1224514 - | hypothetical protein RspA 1226198 - 1224990 - | mandelate racemase/muconate lactonizing protein TERM 1307 1225967 - 1225982 + g 70 -7.5 -3.89501 | TCGTCACTGGACCGC GGCGC CAATAA GCGCC TTTATAAAAATATTG CBU_1276 1227035 - 1226229 - | short chain dehydrogenase/reductase family oxidoreductase TERM 1308 1226393 - 1226379 - G 90 -12.8 -3.41693 | opp_overlap 1226378 CTCAGGATGAATCAA GCGCCC AGA GGGCGC GTAGGTTGGCGGAAT eda 1227098 - 1227805 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 1309 1228171 - 1228161 - g 72 -6.8 -4.27796 | opp_overlap 1228166 1228167 CAAGAAATTGCAAAA GCCT ACC AGGC GGAATGCACGCCTGA TERM 1310 1228166 - 1228186 + G 83 -3.9 -5.36364 | opp_overlap 1228161, overlap 1228167 AATTGCAAAAGCCTA CCAGGCG GAATGCA CGCCTGA TTTTTATGTTTTTGA CBU_1278 1227816 - 1228373 + | antioxidant, AhpC/TSA family TERM 1311 1228774 - 1228784 + G 86 -3.2 -5.47399 | CGGAGTTGTTCTCTT TTGC CTT GCGA TTTTTTTAACCTTGC exoD 1228361 - 1228963 + | exopolysaccharide transporter CBU_1279a 1229009 - 1229131 + | hypothetical cytosolic protein TERM 1312 1229171 - 1229191 + T 72 -3.1 -5.09426 | GTTGACGCCTATGCG CCTTCGCGG GGA CAACGAGGG TTTTTTAAAATTAAG greA 1229818 - 1229297 - | transcription elongation factor CBU_1280a 1230040 - 1230279 + | hypothetical protein TERM 1313 1230324 - 1230301 - T 75 -10.3 -2.92513 | opp_overlap 1230301, overlap 1230303 1230305 ATAACTTTAACGATA GACAGCCCA TCCCCT CGGGCTGTC TTTTTTATAAATCCT TERM 1314 1230301 - 1230324 + T 100 -9.6 -5.28778 | opp_overlap 1230301 1230303 1230305 ATAACTTTAACGATA GACAGCCC ATCCCCTC GGGCTGTC TTTTTTATAAATCCT carB 1233550 - 1230329 - | carbamoyl-phosphate synthase large chain TERM 1315 1230745 - 1230767 + g 71 -9.2 -3.30124 | CCCCTGCCAATTGTC CTTTGGCAAA GGC TTGGCCAAAG TTCTCCGCAATGCCC TERM 1316 1232526 - 1232514 - G 70 -6.2 -4.17048 | opp_overlap 1232522, overlap 1232515 GTGGGTTCAAAAGAA GCCG GCGTT CGGC CACCGGTAATTTCAT TERM 1317 1233574 - 1233605 + r 80 -11.6 -2.88275 | ATTTCAATTTTAGGC TTCGTCATTCCCGC GTAG GCGGAAATGACGGG TAAGTTTTTAGTCTT carA 1234840 - 1233632 - | carbamoyl-phosphate synthase small chain TERM 1318 1235288 - 1235300 + H 79 -6.9 -4.54821 | GCCGGATTATTCAAG GCGTC GGA GGCGC TTTTATGATTCCGGT TERM 1319 1235321 - 1235339 + H 72 -3.1 -5.02074 | gap 1, overlap 1235318 TGATTCCGGTGACGA GCGTGATG ATGG CG-CACGC TTTTTTGGAAAGTGA TERM 1320 1236602 - 1236545 - H 100 -15.4 -3.7557 | gap 2, opp_overlap 1236563 1236567, overlap 1236546 1236563 CCGAAAAACCAAATA CTCATCTCACTGGACAAATTTGTCCAGT GATC ACTAGACAAATTTGTCCAGT--GATGAT AGGGTATATCGATGC TERM 1321 1236604 - 1236546 - H 100 -20.1 -2.84257 | gap 1, opp_overlap 1236563 1236567, overlap 1236545 1236563 CGAAAAACCAAATAC TCATC-TCACTGGACAAATTTGTCCAGT GATC ACTAGACAAATTTGTCCAGTGATGATAG GGTATATCGATGCTA TERM 1322 1236586 - 1236563 - H 79 -9 -3.89524 | opp_overlap 1236563 1236567, overlap 1236545 1236546 ATCTCACTGGACAAA TTTGTCCAGT GATC ACTAGACAAA TTTGTCCAGTGATGA TERM 1323 1237545 - 1237532 - g 77 -2.3 -5.46657 | GACCCTAACAAAAAA CAAGG TTAC CCTAG AAAAGATCGAAAATT CBU_1284 1236614 - 1237924 + | hypothetical ATPase TERM 1324 1237967 - 1237987 + G 73 -2.5 -5.14163 | overlap 1237970 TACTCATTATCGCTA TGGTGGCCT GTT ACGCCATTA TTTTTATTGATGAAT TERM 1325 1238626 - 1238639 + G 100 -8.1 -5.54907 | GTTTGTTTTGCGGTG GCGCT AATT AGCGC TTTTTATTTTGTAAA CBU_1285 1237921 - 1239279 + | multidrug resistance protein B TERM 1326 1239340 - 1239284 - f 100 -17.8 -3.89524 | gap 1, opp_overlap 1239288 1239300, overlap 1239287 AGGTTAGGTGACAAA TCA-GCCATTACCCAAATTTGGGTAAT GGTC ATTGCCCAAATTTAGGTAATGGCATAA AATATATTCATGGAC TERM 1327 1239336 - 1239287 - f 100 -23.3 -3.01918 | opp_overlap 1239288 1239300, overlap 1239284 TTAGGTGACAAATCA GCCATTACCCAAATTTGGGTAAT GGTC ATTGCCCAAATTTAGGTAATGGC ATAAAATATATTCAT TERM 1328 1239288 - 1239311 + F 91 -14 -2.7186 | opp_overlap 1239287 1239284, overlap 1239300 TAGGTGACAAATCAG CCATTACCCA AATT TGGGTAATGG TCATTGCCCAAATTT TERM 1329 1239300 - 1239323 + F 76 -9 -3.68529 | opp_overlap 1239287 1239284, overlap 1239288 CAGCCATTACCCAAA TTTGGGTAAT GGTC ATTGCCCAAA TTTAGGTAATGGCAT TERM 1330 1240265 - 1240284 + G 71 -7.9 -3.78775 | opp_overlap 1240264 1240281 TTATCTAGAATGGAT GCGCTTT TTATTC AAAGCGC TTTGCTGCTCGACAA CBU_1286 1239350 - 1240732 + | hypothetical ATPase TERM 1331 1242625 - 1242654 + T 72 -8.7 -3.57144 | opp_overlap 1242632 1242633, overlap 1242632 1242633 TTCTTAGAAGAAAGT TAAGAAACCCTGC TGAT GCAGGCTTTTTTA TTTGGAAGTGAAGAA TERM 1332 1242632 - 1242647 + T 89 -4.6 -5.63517 | opp_overlap 1242632 1242633, overlap 1242625 1242633 AAGAAAGTTAAGAAA CCCTGC TGAT GCAGGC TTTTTTATTTGGAAG TERM 1333 1242633 - 1242646 + T 75 -8.1 -3.97026 | opp_overlap 1242632 1242633, overlap 1242632 1242625 AGAAAGTTAAGAAAC CCTGC TGAT GCAGG CTTTTTTATTTGGAA dnaJ 1243776 - 1242652 - | chaperone protein TERM 1334 1243771 - 1243782 + g 71 -2.2 -5.08255 | GTAATAATCGCGTTT TGCC ATGA GGTA TTTTATTTTCCAAGT TERM 1335 1243837 - 1243876 + r 81 -11.5 -3.05384 | opp_overlap 1243837 GCCCGTATGAGCGAA GCGAAATACGGGGAGAC AACATG GAATTCCCGTATTTCGC TTCGCTCCAGACGGG dnaK 1245889 - 1243919 - | chaperone protein TERM 1336 1244042 - 1244056 + g 84 -7 -5.0538 | overlap 1244040 1244044 GCCTCCCGGAGGAGC GCCGGC AGC GCCGCC TTTTTTAGCATACAC CBU_1291 1246055 - 1246648 + | putative biotin-requiring enzyme subunit CBU_1292 1246651 - 1248048 + | ankyrin repeat-containing protein TERM 1337 1248078 - 1248057 - T 100 -10.9 -5.80364 | overlap 1248059 ATTTTAAGAAAAAAA TCTCTGGCG CTTA CGCCAGAAA CAAGAGCGAGTCGCC TERM 1338 1248076 - 1248059 - T 81 -11.3 -3.0287 | overlap 1248057 TTTAAGAAAAAAATC TCTGGCG CTTA CGCCAGA AACAAGAGCGAGTCG TERM 1339 1248126 - 1248082 - T 73 -7.2 -4.07877 | gap 2, opp_overlap 1248098, overlap 1248084 1248098 TTACGCCAGAAACAA GAGCGAGTCGCCAAAAGGGAGC ATT GTTCCCTTTTGGCGGTTC-C-C GAAGGCAAAATTCAA TERM 1340 1248126 - 1248084 - T 95 -13.4 -3.63097 | opp_overlap 1248098, overlap 1248082 1248098 ACGCCAGAAACAAGA GCGAGTCGCCAAAAGGGAGC ATT GTTCCCTTTTGGCGGTTCCC GAAGGCAAAATTCAA TERM 1341 1248098 - 1248112 + T 77 -7.8 -4.14392 | opp_overlap 1248082 1248084 1248098 AGCGAGTCGCCAAAA GGGAGC ATT GTTCCC TTTTGGCGGTTCCCG TERM 1342 1248174 - 1248153 - T 80 -6.5 -4.7416 | opp_overlap 1248153 TCAAAATCGGAAAAA TCTCGGTCA CTTG CGGCCGAGA TTTTTATCCCGCCAC TERM 1343 1248153 - 1248174 + T 84 -8 -4.82901 | opp_overlap 1248153 TCAAAATCGGAAAAA TCTCGGTC ACTTGC GGCCGAGA TTTTTATCCCGCCAC grpE 1248804 - 1248178 - | co-chaperone GrpE CBU_1294 1249236 - 1248859 - | PilT domain-containing protein CBU_1295 1249555 - 1249226 - | hypothetical membrane associated protein CBU_1296 1249565 - 1250464 + | NAD(+)/NADH kinase TERM 1344 1251932 - 1251918 - g 72 -5.7 -4.58283 | GAACTCGGCGAAAAA GCACA GGTGT TGTGC ATCACGCATTTGCCA recN 1250469 - 1252139 + | DNA repair protein TERM 1345 1252254 - 1252207 - T 72 -9.5 -3.09516 | gap 2, opp_overlap 1252207 GCCCGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 1346 1252657 - 1252645 - T 71 -6.3 -4.25104 | opp_overlap 1252644 CTGTGCTGATTAAAA GATTC CAG GAATC ATTAGGTCTTTGAGA CBU_1300 1254621 - 1254274 - | hypothetical protein fur 1255099 - 1254632 - | ferric uptake regulation protein CBU_1303 1255855 - 1255550 - | hypothetical cytosolic protein omlA 1255226 - 1255606 + | outer membrane lipoprotein CBU_1304 1256292 - 1255852 - | polyketide cyclase/dehydrase family protein smpB 1256319 - 1256798 + | SsrA-binding protein msrA 1256791 - 1257645 + | bifunctional methionine sulfoxide reductase B/A protein CBU_1307 1258062 - 1257646 - | hypothetical membrane associated protein TERM 1347 1258723 - 1258747 + G 75 -8.6 -3.77464 | CGTATCAAGACGGTT GTGACGACGA ATTTA TTGTCGTCGC TTTGCTGCATGATAT CBU_1308 1258425 - 1259090 + | phosphohydrolase family protein CBU_1310 1260838 - 1260734 - | hypothetical protein CBU_1311 1263306 - 1260865 - | hypothetical cytosolic protein TERM 1348 1261977 - 1261989 + g 70 -6.3 -4.21194 | opp_overlap 1261976 CGCTCTTAACGAAGG GAAGT ATC ACTTC TTTTAACTCATCGAA TERM 1349 1262685 - 1262700 + g 72 -5.4 -4.4773 | ATATTTTCACAGGGG CCGGAA TATT TTCTGG TTTTAGTTGATCTGA CBU_1312 1263468 - 1263581 + | hypothetical protein TERM 1350 1263709 - 1263721 + T 70 -3.4 -4.90778 | opp_overlap 1263709 CGAAAGTTTCAAGAA TAGC TAATT GCTA TTTTGTTTGAGTGCA CBU_1313 1263837 - 1263712 - | hypothetical protein CBU_1314 1264690 - 1264046 - | hypothetical cytosolic protein CBU_1316 1265610 - 1265383 - | hypothetical cytosolic protein CBU_1316a 1265634 - 1265741 + | hypothetical protein CBU_1317 1265893 - 1265765 - | hypothetical protein TERM 1351 1265828 - 1265804 - G 71 -2.2 -5.09426 | gap 1, opp_overlap 1265808, overlap 1265808 TTCAATTTTAAAAAA GCAAGCTTTGA AATT TGAAAGCT-GC TTGAAGTAAAAAGTT TERM 1352 1265950 - 1265961 + r 89 -5.8 -5.45726 | opp_overlap 1265949 TCCTACCGATTTAAG GTGC ATCG GCAC TTTTTTTAAAATCTA TERM 1353 1265992 - 1265980 - R 70 -5.5 -4.4267 | opp_overlap 1265987, overlap 1265985 1265987 TTTTAAAATCTAAAA GCGAA TAG CTCGC GAAAATAAATTGAAT TERM 1354 1266107 - 1266095 - R 76 -9.1 -3.65199 | overlap 1266099 AACGGCTTATTTAAA CGCAC TGC GTGCG TCACATGGATATTTT CBU_1318 1266876 - 1266253 - | hypothetical cytosolic protein CBU_1319 1267403 - 1267068 - | transcriptional regulator domain protein ihfA 1267728 - 1267417 - | integration host factor alpha-subunit pheT 1270111 - 1267733 - | phenylalanyl-tRNA synthetase beta chain pheS 1271097 - 1270111 - | phenylalanyl-tRNA synthetase alpha chain TERM 1355 1270162 - 1270150 - G 80 -5.5 -5.03715 | ATCATTTTCAAAAAA CAACC GCA GGTCG GTGACTTCATAACGC TERM 1356 1270410 - 1270397 - G 83 -3.9 -5.40072 | opp_overlap 1270397 TCTTTTTCAAAAAAA CAATT TAAA AATTG TTGTAATAACCCTTT TERM 1357 1270900 - 1270920 + g 74 -6.9 -4.30576 | opp_overlap 1270917 TAATTGCTGGATTTC GCGCTTAAT CTC ATTAACCGC TTTTCCTAATAACGG rplT 1271533 - 1271174 - | 50S ribosomal protein L20 TERM 1358 1271939 - 1271973 + H 76 -7.2 -4.15453 | GGATCCAGATTAGGG GGTTAAGAAAAACATC GAT GGCGCTTTTCTTAGCC TTTTAGCCTGGATTC CBU_1323a 1271991 - 1272092 + | hypothetical cytosolic protein TERM 1359 1272135 - 1272146 + T 73 -2.2 -5.243 | GCCTGCTCGGGATGA CGTG GTTT TACG TTTTTTAGTCATTTA rpmI 1272367 - 1272173 - | LSU ribosomal protein L35P infC 1272857 - 1272348 - | bacterial protein translation initiation factor 3 (IF-3) thrS 1274923 - 1272941 - | threonyl-tRNA synthetase TERM 1360 1274770 - 1274758 - G 72 -3.4 -4.96427 | CAATAATAAAAGAAA CATC GACAA GATG ATCATCGATTTTGCC TERM 1361 1274784 - 1274797 + g 75 -9.5 -3.53091 | TGATCATCGATTTTG CCCGC CAAC GCGGG TTTCGCAAGCGAAGT CBU_1328 1275011 - 1275283 + | hypothetical cytosolic protein CBU_1329 1276360 - 1275290 - | radical SAM superfamily protein TERM 1362 1275856 - 1275870 + g 84 -8.6 -4.32034 | opp_overlap 1275855 AAATATCTATATCAC GTTCGA TCA TCGAAC TTTTGGTAATAATCA TERM 1363 1277784 - 1277802 + H 87 -5.2 -5.37593 | opp_overlap 1277784 1277785, overlap 1277785 1277787 CCCAATCCACCCAAA CTGCCGCT GAG AGCGGTAA TTTTTTGATTTAAAA TERM 1364 1277785 - 1277801 + H 77 -8.7 -3.81472 | opp_overlap 1277785 1277784, overlap 1277784 1277787 CCAATCCACCCAAAC TGCCGCT GAG AGCGGTA ATTTTTTGATTTAAA TERM 1365 1277787 - 1277799 + H 74 -9.1 -3.47392 | opp_overlap 1277785 1277784, overlap 1277785 1277784 AATCCACCCAAACTG CCGCT GAG AGCGG TAATTTTTTGATTTA CBU_1331 1277933 - 1278310 + | CBS domain-containing protein CBU_1332 1278298 - 1278450 + | hypothetical cytosolic protein CBU_1332a 1278374 - 1278481 + | hypothetical protein CBU_1333 1278463 - 1279254 + | hypothetical membrane spanning protein CBU_1334 1280342 - 1279209 - | hypothetical membrane spanning protein CBU_1335 1280843 - 1281991 + | cyclin protein CBU_1336 1282903 - 1281986 - | transporter, drug/metabolite exporter family TERM 1366 1282631 - 1282619 - G 70 -9.1 -3.14344 | TAGTGCCGTGATGAA TGCGG AAT CCGCA GAACTGATACTCTCA TERM 1367 1282887 - 1282873 - G 100 -4.9 -6.11243 | opp_overlap 1282873 ATGTAATAAAAAAAA GGGCA AGATG CGCCC TTACTGAAAGTTTCA dnaE 1286443 - 1283012 - | DNA polymerase III alpha subunit TERM 1368 1283901 - 1283886 - G 82 -4.8 -5.2291 | ACACGAGAACAAAAA TTAAAG AGTC CTTTAA ATTCACCTTCAGCTT TERM 1369 1285010 - 1285042 + g 76 -5.6 -4.85599 | gap 1 TTCATCTTCCGCGTA GCGCTT-AGCCAGTA TTTC TTCTTGCTCAAGCGC TTTTTCTAACGTCAC TERM 1370 1285647 - 1285630 - G 83 -2.7 -5.47821 | ACTTAGGTAAAAAAA CTTCATC CAAC GACAAAG GAACGCTGCAACGTT CBU_1338 1287566 - 1286445 - | D-alanine--D-alanine ligase TERM 1371 1287291 - 1287277 - G 72 -8.5 -3.61715 | opp_overlap 1287277 CAGTCTGCCGAATAA CGGCG TCCAT CGCCG TTTAACGACTGCCAA TERM 1372 1287277 - 1287291 + g 71 -8.5 -3.55444 | opp_overlap 1287277 CAGTCTGCCGAATAA CGGCG TCCAT CGCCG TTTAACGACTGCCAA rnhB 1288321 - 1287713 - | ribonuclease HII CBU_1340 1288629 - 1288333 - | hypothetical protein guaA 1290190 - 1288616 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1373 1289806 - 1289787 - G 76 -7.8 -4.19371 | opp_overlap 1289787 CAAACGTCTAACAAA GGTTCGCC TTGA GGCGAAAC TTGATCTTCAATACC TERM 1374 1289852 - 1289835 - G 100 -6.3 -5.63517 | gap 1 CCGTCAAATAAAAAA GCGGG-AT TTA ATACCCGC AATTGCGCATGTCCA guaB 1291696 - 1290227 - | inosine-5'-monophosphate dehydrogenase TERM 1375 1291242 - 1291258 + g 71 -3.7 -4.76041 | AGGCGATCTTTGGGC GTCATTA AAT TAACGAC TTTTTGCTGCATGTC TERM 1376 1292876 - 1292863 - H 95 -2.5 -6.34616 | opp_overlap 1292863 CTAAAACAAAAAAAA TAAAA TAAC TTTTA TTGTTAGAAGGACGC CBU_1345 1293369 - 1294658 + | transporter, MFS superfamily TERM 1377 1295983 - 1295948 - gT 93 -11.9 -3.83998 | gap 1, opp_overlap 1295969, overlap 1295968 CTACTTTAGATGAAA GCGCCCAA-CAATGGG ATAAA CCCAATGGCTGGGCGC CGCTGCATTGGATTG CBU_1347 1297626 - 1296202 - | amino acid permease family protein CBU_1346 1294909 - 1296291 + | trehalase TERM 1378 1296822 - 1296812 - Gf 93 -6.8 -5.43866 | overlap 1296820 TAAGCGCTAAAAAAA GCGT CAA ACGC CTGCATAATGCCAGC TERM 1379 1297950 - 1297964 + G 77 -3.4 -5.26247 | AACAGCACCCACCCA CTTCGG GGG CCGTGG TTTTATTTGTTTTCG CBU_1348 1297839 - 1298006 + | hypothetical protein TERM 1380 1298276 - 1298255 - g 80 -8.8 -4.15788 | opp_overlap 1298246 1298244 AACCGCCTGAAGAAA CTTTGGCT GTTTTA AGCCAAAG CGTAAGCGAGGGTGC TERM 1381 1298570 - 1298554 - g 85 -10.9 -3.75153 | opp_overlap 1298569 1298569, overlap 1298569 TCTTCTGAACTTAAA GCTTCCT GGG AGGAAGC CGAACGGTATACTAC CBU_1349 1298083 - 1299822 + | hypothetical cytosolic protein TERM 1382 1299850 - 1299876 + T 76 -10.9 -2.54171 | gap 1, opp_overlap 1299848, overlap 1299849 1299847 1299848 TAAAATCACAAATTC CGTCATTCCCGC GCAG GCGGG-ATGGCG ATGATTTTTAGAAAT TERM 1383 1299942 - 1299968 + T 72 -9.4 -2.9665 | opp_overlap 1299941 1299940, overlap 1299941 GTTTTCCGTTAAAGC GTTGACTGCTGC ACG GCAGCGGCTAAC ATTTCTGCGGTTTGG glmM 1301275 - 1299935 - | phosphoglucosamine mutase TERM 1384 1300059 - 1300070 + g 74 -7.2 -4.25754 | opp_overlap 1300059 1300057 1300055 GGGCGCAATAAGATA CGGC CGGC GCCG TTTAATTGTTTTTCG TERM 1385 1300086 - 1300099 + g 77 -3.1 -5.27779 | gap 1 TTTAATTGTTTTTCG GCC-TC GGT GATGGC TTTTTTAATGTTGGG TERM 1386 1300149 - 1300135 - G 74 -7.1 -4.28254 | opp_overlap 1300120 1300134 GGGCAATATCTAAAA TGCCC TTTAT GGGCA CATTTATTAATACTT TERM 1387 1301295 - 1301328 + r 100 -21.1 -3.84719 | CCTCTTCAATTTTAG GCTCGTCATTCCCGC CTGC GCGGGGATGACGGGC TTTAAGTTTCCCGCT folP 1302257 - 1301364 - | dihydropteroate synthase TERM 1388 1301824 - 1301807 - G 71 -4.9 -4.5123 | gap 1, overlap 1301810 AATGCATCAAACAAA CAGGCGTT TTT AACGC-TG AAACGGTTGTTAAAG TERM 1389 1302252 - 1302282 + g 89 -14.7 -3.09492 | AAATGCCTCCTTACT CATCATCCCGCGG AAAAA CCGCGGGATGGGG TGTTAACGTTAAAGA ftsH 1304252 - 1302309 - | ATP-dependent metallopeptidase HflB TERM 1390 1302369 - 1302390 + g 74 -3.7 -4.99645 | TTCTTCGCCTTTCTC TTCCGATAG TTCT TTTTCGGAA TTTTCTTTGTGAGCT TERM 1391 1303217 - 1303229 + g 76 -7.7 -4.29106 | AGGCTTTAACGTCTT TTGCC AGA GGCAA TTTATTCATGTGCAC TERM 1392 1303503 - 1303515 + g 85 -7.7 -4.63527 | opp_overlap 1303502 1303499 1303503 ATCGATAAAAATAAT GCAAG GCG CTTGC TTTTTAGCCTGATCG TERM 1393 1303592 - 1303582 - G 74 -6.8 -4.39828 | AACATCTCCACAAAA TCCG AAC CGGA AATGGTGAAGAAAGG rrmJ 1304910 - 1304272 - | 23S rRNA Um2552 2'-O-methyltransferase TERM 1394 1304830 - 1304845 + g 74 -3.2 -5.07107 | overlap 1304831 CTTGTACGCCGCGCG CGAAGG ATAG CCTTCC TTTTTTGCCCGTTTG CBU_1354 1305474 - 1304932 - | hypothetical cytosolic protein CBU_1355 1305829 - 1305476 - | FeS assembly scaffold SufA TERM 1395 1305517 - 1305533 + g 83 -10.9 -3.65224 | opp_overlap 1305517 1305516 CCCCACAACCACAAG CCCCAAT TGC ATTGGGG TTATTAAAGTGAAGT TERM 1396 1305533 - 1305517 - G 74 -10.9 -2.73474 | opp_overlap 1305517, overlap 1305516 CCCCACAACCACAAG CCCCAAT TGC ATTGGGG TTATTAAAGTGAAGT iscU.2 1306302 - 1305826 - | SUF system FeS assembly protein, NifU family csdB 1307512 - 1306295 - | cysteine desulfurase SufS TERM 1397 1306922 - 1306937 + g 70 -6.2 -4.25283 | CTGCGCACCATCCAG CAAAAC AGGG GTTTTG TTTTGATGAGCCAAT sufD 1308785 - 1307505 - | FeS assembly protein SufD TERM 1398 1308167 - 1308155 - G 72 -7.7 -3.97368 | GCTGCAATTTATAAA GCTCA AGA TGAGC AGCCGAATTAACCTT sufC 1309516 - 1308782 - | FeS assembly ATPase SufC sufB 1310994 - 1309540 - | FeS assembly protein SufB CBU_1361 1311436 - 1310975 - | FeS assembly SUF system regulator TERM 1399 1312624 - 1312634 + G 72 -6.8 -4.29845 | GGGTTTCACCGACAT CCGT CGC ACGG TTTTGCATTACCTTA czcD.2 1311644 - 1312780 + | cation diffusion facilitator family transporter CBU_1363 1312773 - 1314149 + | exonuclease TERM 1400 1314135 - 1314149 + T 81 -5.8 -5.04385 | overlap 1314143 GAATTAGATCATTAT TTAAGA CTG TCTTAA TTTTTTAAGGCTATA TERM 1401 1314274 - 1314294 + T 75 -5.4 -4.68424 | CGAGCAAGGCCCTCA GGCGTTTG CCAAC CAAGTGCC TTTTTACGTGACTTG CBU_1366 1316078 - 1315746 - | hypothetical protein TERM 1402 1316151 - 1316133 - H 72 -10.2 -2.58812 | overlap 1316129 CGCAAACGGAATCCA GGCGCACC TTC GGTGCGCT ACGCACGCTAGGTCC TERM 1403 1318591 - 1318601 + G 80 -6.8 -4.8048 | opp_overlap 1318590 GCCTATTTTGAAATT CACC CGT GGTG TTTTTGGTCTGAAAC CBU_1369 1318270 - 1319289 + | hypothetical membrane associated protein TERM 1404 1319313 - 1319364 + T 100 -28.3 -3.1505 | opp_overlap 1319313 1319324, overlap 1319324 GGTAGCCCGTATGAA GCGCAGCGAAATACGGGAACCGC ATCATC GTTGTTCCCGTATTTCGCTGCGC TTCATACGAGCTACT TERM 1405 1319364 - 1319313 - T 100 -26.8 -3.14931 | opp_overlap 1319313 1319324, overlap 1319324 GGTAGCCCGTATGAA GCGCAGCGAAATACGGGAACCGCA TCAT CGTTGTTCCCGTATTTCGCTGCGC TTCATACGAGCTACT TERM 1406 1319324 - 1319353 + T 73 -8.6 -3.66874 | opp_overlap 1319313 1319324, overlap 1319313 TGAAGCGCAGCGAAA TACGGGAACCGC ATCATC GTTGTTCCCGTA TTTCGCTGCGCTTCA CBU_1370 1320475 - 1319489 - | hypothetical membrane associated protein TERM 1407 1320331 - 1320343 + g 72 -5.5 -4.49041 | CCGGGTGTAAAATTT CTGCT GAA GGCAG TTCTTTTAATTTTTT TERM 1408 1320522 - 1320510 - R 74 -4.9 -4.77757 | opp_overlap 1320510 TTTGAAAAATTAAAA TTGAA TTA TTCAA TTTAGTATATAATTC CBU_1371 1321348 - 1320668 - | non-proteolytic protein, peptidase family M22 TERM 1409 1321315 - 1321299 - G 86 -10.8 -3.92869 | overlap 1321310 CCATTTAGCCACAAA GCGGCC GAACA GGCCGC GGTAGCCGTTTCAAG TERM 1410 1321460 - 1321414 - R 72 -9.7 -3.09516 | opp_overlap 1321414 1321420 GCCCGTATGAGCGAA GCGAAATACGGG-GACGATAGAT GAC ATC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC TERM 1411 1321414 - 1321460 + r 95 -14.1 -3.09516 | opp_overlap 1321414, overlap 1321420 GCCCGTATGAGCGAA GCGAAATACGGG-GACGATAGAT GAC ATC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC CBU_1372 1322073 - 1321492 - | hypothetical membrane associated protein pabB 1322174 - 1323466 + | para-aminobenzoate synthetase component I TERM 1412 1323500 - 1323518 + G 77 -9 -3.82946 | opp_overlap 1323499 AATTTTTGCATGAAG TTTTTGAC TTA GTCAAAAA TTCTATTTCGCATAA TERM 1413 1323801 - 1323787 - g 76 -2.8 -5.26875 | opp_overlap 1323789, overlap 1323789 TCTTTAACTAAAAAA GACGCT GAG AACATC GGTTTCAAGGACGCT CBU_1374 1323463 - 1323942 + | cytidine/deoxycytidylate deaminase family protein relA 1326119 - 1323975 - | RelA/SpoT family protein TERM 1414 1326378 - 1326357 - g 70 -5.7 -4.36595 | opp_overlap 1326357 GATGGAAAGGTAAAA GCGGGACCG AGTA CGTTCTCGC TATGTTACCACTCGG CBU_1376 1326197 - 1327561 + | membrane endopeptidase, M50 family CBU_1376a 1327775 - 1327810 + | hypothetical protein TERM 1415 1328038 - 1328077 + F 86 -10.9 -3.90112 | gap 2, opp_overlap 1328063 1328064, overlap 1328039 1328041 TATTGATTATTTCCC CCAGCCTAGTCTGTCCGTT GTAA AACGG-CAG-CTAGGCTGC TTTCATTCCAGGAAG TERM 1416 1328039 - 1328076 + F 95 -14.4 -2.93853 | gap 2, opp_overlap 1328063 1328064, overlap 1328038 1328041 ATTGATTATTTCCCC CAGCCTAGTCTGTCCGTT GTAA AACGG-CAG-CTAGGCTG CTTTCATTCCAGGAA TERM 1417 1328041 - 1328074 + F 81 -11.2 -3.02166 | gap 2, opp_overlap 1328063 1328064, overlap 1328039 1328038 TGATTATTTCCCCCA GCCTAGTCTGTCCGTT GTAA AACGG-CAG-CTAGGC TGCTTTCATTCCAGG TERM 1418 1328358 - 1328341 - f 71 -4.9 -4.55826 | overlap 1328343 TTGAAAATATTAAAA TAGGATT GCCT AATCCCA TGCGAACCGTTGAAG CBU_1378 1328863 - 1328979 + | hypothetical protein TERM 1419 1330733 - 1330706 - g 77 -3.6 -5.27477 | gap 1 AGTCCAATGAAAAAA GCTCGCTAAATCT TTT AAATTTAAC-AGC GAAGTTACTTTACCC CBU_1379a 1330216 - 1331064 + | hypothetical protein CBU_1380 1331945 - 1331100 - | DoxD family protein TERM 1420 1331266 - 1331285 + g 71 -4.3 -4.60889 | overlap 1331252 TCCCAACCACCGCCT GGGTTTG CCCATA TAAACCC TTTTTGAAAATGATT cdsA 1332941 - 1332123 - | phosphatidate cytidylyltransferase TERM 1421 1332612 - 1332588 - G 81 -3.5 -5.41359 | overlap 1332589 AATTAAAGCAAAAAA CCCGACAATCA ATT TTACTGCCGGA TATTGAAACCCCAAG uppS 1333644 - 1332931 - | undecaprenyl pyrophosphate synthetase rrf 1334198 - 1333641 - | ribosome recycling factor pyrH 1335007 - 1334276 - | uridylate kinase tsf 1335897 - 1335007 - | elongation factor Ts TERM 1422 1335184 - 1335195 + g 71 -4.4 -4.59773 | GCCTTCTAAGCTGAC CTCT TTTA AGAG TTTTTCCACCTGGCC rpsB 1336986 - 1335907 - | SSU ribosomal protein S2P CBU_1387 1337068 - 1337718 + | hypothetical cytosolic protein map 1337773 - 1338585 + | methionine aminopeptidase TERM 1423 1338879 - 1338892 + T 72 -3.1 -5.01732 | TTCTGCCATCGCCAT GAGTG CATT CATTC TTTTTTCAAGCCCTT CBU_1388d 1341974 - 1341810 - | hypothetical protein TERM 1424 1342379 - 1342412 + H 71 -5.3 -4.49364 | GGCTTGAATAAAGCG GTGGGGTACTCAAAT ACCA ATTTCATTTCCCCAC TTTCTTCTTGAATTT TERM 1425 1343415 - 1343430 + H 71 -4 -4.90778 | CGGCTTCTAAACGAG GGATAT CTAA ATGTCC TTTTATTTCAATCAA TERM 1426 1343464 - 1343474 + H 81 -6.8 -4.67173 | opp_overlap 1343463 AGGCGCGTTATAATT CAGG TTC CCTG TTGTTTTTTGCGTTG TERM 1427 1343747 - 1343765 + H 78 -7.4 -4.40184 | overlap 1343749 TCCAATACTTCTTGC CACAGTTG AGC CAACTGCG TTTCTATTTCATTAC TERM 1428 1344712 - 1344700 - H 71 -4.1 -4.88405 | AAGGGGCAAATAAAA CTCTA AGC CAGAG ATATCAAAAGTATAA enhA.5 1346886 - 1347413 + | enhanced entry protein CBU_1395 1347878 - 1347432 - | hypothetical membrane spanning protein sucD 1348759 - 1347875 - | succinate-CoA ligase (ADP-forming), alpha subunit TERM 1429 1348154 - 1348176 + g 71 -8.6 -3.53811 | CATAACGATGGCTTG TGTTTGAGAA TCT TTTTCAAACA TTTCCAAGACGTCGA sucC 1349931 - 1348759 - | succinate-CoA ligase (ADP-forming), beta subunit sucB 1351350 - 1350133 - | dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex TERM 1430 1350286 - 1350296 + g 70 -5.4 -4.33182 | overlap 1350282 TCCGTTTTCAACCGT TGGA CGG TCCA TTATTTTATGCATCC TERM 1431 1350591 - 1350609 + g 72 -7.4 -4.14392 | TACCATCGATCGAGG CGTTTACC ATG GGAAAACG TTTTAACGCTTCAAC TERM 1432 1350860 - 1350870 + g 95 -3.2 -5.69262 | overlap 1350852 1350854 CCTTCTTTTCCTTCG GAGG GTT TCTC TTTTTGTTTTTCTAA kgd 1354164 - 1351360 - | alpha-ketoglutarate decarboxylase TERM 1433 1351713 - 1351724 + g 84 -4.4 -5.44721 | opp_overlap 1351713 TTCCACTGCACAAAA TCAC GCGG GTGA TTTTTTTCGGATCGT TERM 1434 1353126 - 1353098 - G 77 -7.4 -4.42748 | gap 1, opp_overlap 1353124 TCACCCGAAAAAGAA GCGTCG-CCGTGA ATCA TCACGGTCATCGC GTAATCGCGTTTGTG TERM 1435 1353124 - 1353135 + g 72 -7.2 -4.12901 | opp_overlap 1353098 AATCATCACGGTCAT CGCG TAAT CGCG TTTGTGTCCATTTTG TERM 1436 1353509 - 1353525 + g 73 -4.5 -4.8543 | CGAACTTGGCCGACA TATTTGG TAT CTAAATA TTTTTCTAAAGATTC TERM 1437 1353961 - 1353980 + g 74 -10.8 -2.75064 | overlap 1353950 1353958 CGGTTTACGCGCTAA TTCGCGAA ATTC TTCGCGAA TGGTTGCATGCGAAA sdhB 1354919 - 1354188 - | succinate dehydrogenase iron-sulfur subunit TERM 1438 1354327 - 1354307 - G 74 -3.9 -4.94972 | opp_overlap 1354310, overlap 1354310 TACGACAACGAAAAA CACTGTAGG GGT CCTTCATTG CATCGAGGCGTTCTT TERM 1439 1354892 - 1354904 + g 76 -4.1 -5.10029 | GCATAATTGAGAAAG TCATG ATT CGTGA TTTTTTAGAATTCAT sdhA 1356689 - 1354926 - | succinate dehydrogenase flavoprotein subunit TERM 1440 1356124 - 1356113 - G 77 -2.2 -5.44119 | GTGATTTGAAAAAAA CCAA CTCA CTGG TTTCCATATTCATTG TERM 1441 1356311 - 1356335 + g 72 -9.9 -3.18264 | opp_overlap 1356311 1356310 TTTCTTTACCGAAAT CGCGCGTGTGG CCG CCAAAAGCGCG TTGATAGATGCGACC TERM 1442 1356648 - 1356665 + g 76 -8.5 -3.99315 | CGCCCCGCCCGCTCC TACGATG AGAG CATCGTA TTGTTTGACTCTAAT TERM 1443 1356740 - 1356723 - R 70 -3.5 -4.87665 | gap 1 CGCTATCCACAAAAA TTCG-ATG GCC CATACGAA ATAGCCCACTAACAA sdhD 1357049 - 1356702 - | succinate dehydrogenase membrane anchor subunit TERM 1444 1356779 - 1356795 + g 71 -2.2 -5.1101 | CCAGAGTCTCTAAAG CGAGCC GTATG GGTTTG TTTTTTACATAATCG sdhC 1357534 - 1357037 - | succinate dehydrogenase cytochrome b556 subunit TERM 1445 1357327 - 1357316 - G 71 -2.2 -5.03994 | GGGCATACATAAAAA GAGT ACAA ACCC AGAAATACGATGCCC CBU_1404 1357879 - 1357547 - | hypothetical protein CBU_1405 1357889 - 1358170 + | hypothetical protein TERM 1446 1358196 - 1358150 - T 72 -9.7 -3.09516 | opp_overlap 1358150, overlap 1358158 GTCCGTATGAGCGAA GCGAAATACGGGAAACAAT-GAT GTC ATCTATCGTC-CCCGTGTTTCGC TTCGCTGATAGGGGT TERM 1447 1358692 - 1358678 - T 70 -7.8 -3.63589 | opp_overlap 1358671, overlap 1358668 TAAAATATTTTTAAA CCCGCT AAT AGCGAG GTTACAATTAGATAA TERM 1448 1358835 - 1358819 - T 100 -7.3 -5.55664 | GCAGCATCAAAAAAA GAAAAGG TAT CCTCTTC ATTGAGATCAATCTC TERM 1449 1359226 - 1359212 - T 88 -11.4 -3.56142 | opp_overlap 1359214, overlap 1359208 CTTACCAATAATTAA CAGGGC GCG GCCCTG CTTGGCAGACACGAG CBU_1408 1359292 - 1359188 - | hypothetical protein TERM 1450 1359454 - 1359500 + H 75 -10.2 -3.09516 | opp_overlap 1359438 1359454 1359462, overlap 1359460 CCCGTATGCAGCGAA GCGGAATACGGGAAAACAAGAT GTC ATCTATTGTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 1451 1359500 - 1359454 - H 75 -10.2 -3.07816 | opp_overlap 1359454 1359460, overlap 1359438 1359462 CCCGTATGCAGCGAA GCGGAATACGGGAAAACAAGAT GTC ATCTATTGTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 1452 1359973 - 1359989 + G 100 -7.3 -5.55664 | AACATTAATCTTAGT GAGAAGG ATA CCTTTTC TTTTTTTGATGCTGC CBU_1409 1359670 - 1360506 + | hypothetical protein TERM 1453 1360580 - 1360606 + F 76 -10.8 -2.65116 | opp_overlap 1360545, overlap 1360579 1360578 ATGTCGTCTATCGTC CCCGTATTCCGC TTC GCTGCATACGGG CTATTTAGCTACTCG TERM 1454 1360933 - 1360906 - g 76 -5.6 -4.8622 | opp_overlap 1360907, overlap 1360907 CTTGTGAATCAAAAA TTACCTTTATCG ATGG CGAGAAAGGTAT TTTGCTGTATCGGGG TERM 1455 1360907 - 1360932 + G 85 -9.1 -4.39166 | opp_overlap 1360906 1360907 TTGTGAATCAAAAAT TACCTTTATCG ATGG CGAGAAAGGTA TTTTGCTGTATCGGG TERM 1456 1360932 - 1360907 - g 73 -9.1 -3.5125 | opp_overlap 1360907, overlap 1360906 TTGTGAATCAAAAAT TACCTTTATCG ATGG CGAGAAAGGTA TTTTGCTGTATCGGG TERM 1457 1361130 - 1361158 + G 75 -9.5 -3.44991 | overlap 1361129 1361131 TATGACGCGCATCCT ATGGCGATGGTGC TTA GCACCATCGGCGC TCTTTCAGCTTTCTA TERM 1458 1361131 - 1361157 + G 84 -13 -2.66271 | overlap 1361130 1361129 ATGACGCGCATCCTA TGGCGATGGTGC TTA GCACCATCGGCG CTCTTTCAGCTTTCT TERM 1459 1361816 - 1361827 + G 71 -2.2 -5.09204 | TGAGAAAAAACTTTA TCCG AATG TGGA TTTTTATTCCGGTCT gltA 1360740 - 1362032 + | citrate (Si)-synthase TERM 1460 1362081 - 1362059 - f 90 -9.2 -4.84602 | AGATAAAGAAAGAAA TCTCTGGC TGCTTGT GCCAGAGA CAAGAACGATGCCTA CBU_1411 1362070 - 1362240 + | hypothetical protein CBU_1412 1363105 - 1362284 - | hypothetical protein TERM 1461 1362519 - 1362499 - G 74 -7.5 -4.17048 | opp_overlap 1362499 CCGCCCCTAAAACAA CGCCCCATA AAC CATGGTGCG TTTGATGTTGCTGAG CBU_1413 1363907 - 1363128 - | hypothetical exported membrane spanning protein CBU_1414 1364742 - 1363951 - | hypothetical protein thiL 1365850 - 1364834 - | thiamine-monophosphate kinase TERM 1462 1365039 - 1365052 + g 83 -3.8 -5.40072 | TCTCCACTGGTCAGC GCGT ATTCCC ACGC TTTTTTTAGAGGGCA TERM 1463 1365126 - 1365141 + g 84 -6.8 -5.03314 | ATTTTCGCACCCACT TGGCTC GCTC GGGCCA TTTTTTCAAGGTCCG TERM 1464 1365501 - 1365513 + g 79 -4.9 -5.12617 | GCAAACGCTTTCAGC CAAAT CTC ATTTG TTTTTTGAATGGTTA CBU_1416 1365921 - 1366637 + | S24 family peptidase TERM 1465 1366666 - 1366641 - T 87 -8.3 -4.56597 | opp_overlap 1366642, overlap 1366642 TTTCTCCGTTAAAAA CTTATCGGCCA TAAC CGGCCGATAAT TTTCGATAACGCAGC TERM 1466 1366665 - 1366642 - T 86 -11.8 -3.33744 | opp_overlap 1366642, overlap 1366641 TTCTCCGTTAAAAAC TTATCGGCCA TAAC CGGCCGATAA TTTTCGATAACGCAG TERM 1467 1366642 - 1366665 + T 90 -11.1 -4.18018 | opp_overlap 1366642 1366641 TTCTCCGTTAAAAAC TTATCGGCC ATAACC GGCCGATAA TTTTCGATAACGCAG nusB 1367176 - 1366760 - | transcription antitermination protein NusB CBU_1418 1367639 - 1367166 - | transcriptional regulator NrdR CBU_1419 1368898 - 1367639 - | serine hydroxymethyltransferase TERM 1468 1367696 - 1367710 + g 74 -4.2 -4.93968 | overlap 1367698 ATGGGCTTTTTGTTT GACATC GGC GATGAC TTTTTCGTTATGAAT TERM 1469 1367848 - 1367861 + g 71 -2.3 -5.12068 | AAGGCGAGCGGGTTT CACCG GGAA CGGTA TTTTTGTTAACTGTA TERM 1470 1367895 - 1367905 + g 72 -8.2 -3.91984 | opp_overlap 1367895 TTAGCTCGTCCTAAA GCCG CTT CGGC TTCTTTGCCCGATAT TERM 1471 1369877 - 1369865 - R 78 -4.1 -5.33921 | AAACGAAGGAAAAAA GTTGC GAA ACAAC CACAGCCCATTTGCC TERM 1472 1370142 - 1370104 - R 70 -3 -5.06816 | opp_overlap 1370106 1370120, overlap 1370106 1370109 1370125 ACTCTCTAAGAAAAA GAGTAGCCCGTATGTAGC GAA GCGAAATACGGGAAACTA ATATAATCCTGTATT radA 1371544 - 1370189 - | DNA repair protein RadA TERM 1473 1370674 - 1370688 + g 77 -9.2 -3.72893 | overlap 1370675 TTACGGTAACCACGC TGCCGG AAA CCGGCG TTTCATAGCGCGATA TERM 1474 1370675 - 1370687 + g 71 -10.5 -2.83522 | overlap 1370674 TACGGTAACCACGCT GCCGG AAA CCGGC GTTTCATAGCGCGAT TERM 1475 1371406 - 1371421 + g 76 -4 -5.03314 | gap 1, overlap 1371407 1371409 CGCCCGCAAAGCCGC TCGCACG ATG CGTG-GA TTTTTTAACCGTCAC TERM 1476 1371674 - 1371633 - g 80 -8.3 -4.2461 | gap 1, overlap 1371634 ATCGCGATGAATAAA CCTG-CGACCATTTTAAGTT GTC AACTTAAAACGGTCAACAAA GATAGTCTTATTCTT TERM 1477 1371673 - 1371634 - g 72 -9.6 -3.14284 | gap 1, overlap 1371633 TCGCGATGAATAAAC CTG-CGACCATTTTAAGTT GTC AACTTAAAACGGTCAACAA AGATAGTCTTATTCT CBU_1422a 1371624 - 1371767 + | hypothetical protein TERM 1478 1371797 - 1371771 - T 73 -5.7 -4.62471 | overlap 1371772 CTTAATTTCTAAAAA CCCCCGTCGTC CCCGC GAAGGCGGGGA CCCAGCGCACTGGGT TERM 1479 1371818 - 1371834 + T 91 -13.7 -2.52896 | opp_overlap 1371829 1371830 CGCACTGGGTGCGCT GCGCGCT AAA AGCGCGC TGGATTCCCCCCTGC hemB 1372921 - 1371917 - | delta-aminolevulinic acid dehydratase TERM 1480 1372228 - 1372215 - G 72 -9.5 -3.14878 | opp_overlap 1372215 1372214, overlap 1372213 TCGCGTAAGGCAATA CCGGC ATTC GCCGG ATTCATCTGATAAGT CBU_1425 1373391 - 1372939 - | 17 kDa common-antigen CBU_1426 1373376 - 1373489 + | hypothetical protein TERM 1481 1374288 - 1374302 + Tr 70 -7.8 -3.786 | GGATGGTTTAGATCG GTCGTC TTC GGCGAC TTTACAATTTTCTCG TERM 1482 1374779 - 1374795 + Tr 71 -3.7 -4.85599 | opp_overlap 1374783, overlap 1374770 1374780 1374783 CGCCAGTGGGTCCCA CCAATTG GAC CAATTGA TTTTTGTCCAATGCC TERM 1483 1375792 - 1375774 - TR 81 -7.4 -4.60797 | overlap 1375779 CCGTGATAGATAAAA TAACCCAC TGC GCGGGCTA GCGCGATGAAATTTC TERM 1484 1377166 - 1377146 - TR 74 -4.7 -4.91459 | CAATATCGATAAAAA TTTCTGCCG TAT CGATAGAAA GCAAACGATTAGGCT TERM 1485 1378090 - 1378111 + Tr 71 -5.3 -4.63486 | opp_overlap 1378090 1378085 1378083 ACAAAAACCAGAGAA TTAATTTTC TTAA GAGAATTAA TTTTCTTAAAAAGAT CBU_1427a 1379435 - 1379319 - | hypothetical protein TERM 1486 1379894 - 1379905 + G 70 -7.2 -3.94974 | overlap 1379895 TTAGTTTTATTAATC GGCG GGGG CGCC TTGCTTTTTATTGGT TERM 1487 1379895 - 1379909 + G 80 -5.6 -5.15167 | overlap 1379894 TAGTTTTATTAATCG GCGGGG GCG CCTTGC TTTTTATTGGTCATA TERM 1488 1379936 - 1379946 + G 74 -5.4 -4.61633 | CATACCTTTGAAACC TCGA AAG TCGA TTTTTCCACATATAT CBU_1429 1379567 - 1380112 + | hypothetical membrane spanning protein TERM 1489 1380430 - 1380458 + F 91 -13.1 -2.93073 | overlap 1380427 ACGACATCATTGTTT TCCCGTATTCCGC TTC GCGGCATACGGGC TACTTGTTGAAAACC CBU_1429a 1380572 - 1380916 + | hypothetical protein truB 1381850 - 1380921 - | tRNA pseudouridine synthase B TERM 1490 1381668 - 1381650 - G 76 -6 -4.53707 | AAGAAATTGAGAAAA TTTAGTCG CTT CGCCTAAA CAAATCGGCAAGAGT rbfA 1382187 - 1381828 - | ribosome-binding factor A infB 1384686 - 1382275 - | translation initiation factor IF-2 TERM 1491 1382507 - 1382522 + g 76 -6 -4.56597 | opp_overlap 1382507, overlap 1382508 TCTACCACCATGCAA CCGGCG ATTG CGCCGA TTTTTGAAGAACGAA TERM 1492 1382508 - 1382521 + g 74 -9.5 -3.33744 | opp_overlap 1382507, overlap 1382507 CTACCACCATGCAAC CGGCG ATTG CGCCG ATTTTTGAAGAACGA TERM 1493 1384046 - 1384032 - G 81 -11.4 -3.16564 | opp_overlap 1384021 1384021 GCGCGACTTCACGAA CCACCG GTG CGGTGG GTCGCGCAAAGCCTT TERM 1494 1384184 - 1384218 + g 81 -2.2 -5.49809 | gap 1 TTGTCCTCTTTATCC GGTTTGCGTGAACGA CGAGTC TC-TTTGCGCGGACC TTTTTTTGGGGTTTC TERM 1495 1384371 - 1384386 + g 74 -3.2 -5.06414 | CTTCTTGCGTTGGAG CGGG TTCGGTTT CCCG TTTTTGTTCGACAAC TERM 1496 1384481 - 1384503 + g 100 -6.4 -5.51046 | ACGCTGAGTTTTTTT CGTTTTAAAA CTA TTTTGGAACG TTTTTTGTCTGTTTC nusA 1386203 - 1384692 - | transcription elongation factor NusA TERM 1497 1386022 - 1386043 + g 71 -2.3 -5.1675 | gap 1 ACGACAGTCCAGCAC CGGAAGGATT CGT AATC-TCCCG TTTTTTGATCGATAG CBU_1434 1386668 - 1386207 - | hypothetical cytosolic protein TERM 1498 1386705 - 1386693 - R 100 -6.2 -6.04324 | TCAAAAAACAAAAAA GGGC ACATA GCCC CACTCTTAAACCCGA nuoN 1388494 - 1387046 - | NADH dehydrogenase subunit N TERM 1499 1387286 - 1387269 - G 75 -8.5 -3.84825 | GCGAGCCACACTAAA TGCACTT GGAT AAGTGCA TCAAGAACGCCGACT nuoM 1390024 - 1388504 - | NADH dehydrogenase (ubiquinone), M subunit TERM 1500 1388723 - 1388692 - G 83 -6 -5.06451 | gap 1, overlap 1388694 1388695 CAGGACCGTAAAAAA CAC-GCTTATACATC CAC AACGTATAAGCAGCG CCAATCACTAACGTA TERM 1501 1388720 - 1388694 - G 74 -7.4 -4.15748 | overlap 1388692 1388695 GGACCGTAAAAAACA CGCTTATACATC CAC AACGTATAAGCA GCGCCAATCACTAAC nuoL 1391990 - 1390029 - | NADH dehydrogenase (ubiquinone), L subunit TERM 1502 1390794 - 1390779 - G 71 -4.6 -4.63486 | ATCTTTGGAATAAAA TCCGGC AAAG GGCGGA ATCGCGGCTAAGGAT TERM 1503 1390977 - 1390967 - G 80 -5.4 -5.09521 | overlap 1390968 TTAATAAATGAAAAA TTCC GGC GGAA TAAGCCGAAGCGCCA nuoK 1392352 - 1392047 - | NADH dehydrogenase (ubiquinone), K subunit nuoJ 1392954 - 1392349 - | NADH dehydrogenase (ubiquinone), J subunit nuoI 1393474 - 1392968 - | NADH dehydrogenase (ubiquinone), I subunit nuoH 1394478 - 1393456 - | NADH dehydrogenase (ubiquinone), H subunit TERM 1504 1394342 - 1394330 - G 74 -7.7 -4.11484 | opp_overlap 1394334, overlap 1394334 GCCAACCCGCGAAAA CCAAC GCG GTTGG GGCCAACCCGTGATT nuoG 1396841 - 1394478 - | NADH dehydrogenase subunit G TERM 1505 1396397 - 1396381 - G 71 -10.1 -2.71791 | overlap 1396363 1396380 ATTTCTTCCCCAAAC CGCACGC AAC GCGTGCA CTGGATACAGCGAGT TERM 1506 1396590 - 1396607 + g 100 -9.1 -5.64006 | opp_overlap 1396580 AAATTCCATCACGGC GCGCTGG GCTT CCAGTGC TTTTTTTGATTGCGT nuoF 1398220 - 1396952 - | NADH dehydrogenase (ubiquinone), F subunit nuoE 1398734 - 1398210 - | NADH dehydrogenase (ubiquinone), E subunit TERM 1507 1398635 - 1398625 - G 71 -4.6 -4.67968 | opp_overlap 1398634, overlap 1398626 1398627 TGAACAAATAATAAA GCCG GTA CGAC CGCTGACCGTTTTTG nuoD 1399987 - 1398734 - | NADH dehydrogenase subunit D nuoC 1400663 - 1399980 - | NADH dehydrogenase (ubiquinone), C subunit TERM 1508 1400627 - 1400647 + g 73 -4.7 -4.85782 | overlap 1400597 1400629 GTGAATTAAAGCGGT CGTTGATGG CAT CTATCAAGG TTTGTTTTTCAGCCA nuoB 1401158 - 1400673 - | NADH dehydrogenase subunit B nuoA 1401525 - 1401163 - | NADH dehydrogenase (ubiquinone), A subunit secG 1402112 - 1401816 - | protein translocase subunit tpiA 1402909 - 1402094 - | triose-phosphate isomerase TERM 1509 1402311 - 1402325 + g 71 -2.1 -5.09426 | TGCACTTCTTCTGCT TGCGA AGGCG TTGCA TTTTTTCCGGTTCCA TERM 1510 1403117 - 1403138 + r 89 -10.1 -4.25056 | opp_overlap 1403119, overlap 1403119 TAAAGTGAGAAAAAA AAGGACCGC AAAA GCGGTCCTC TTTATTAGTACAATC TERM 1511 1403136 - 1403119 - R 100 -12.7 -5.97575 | opp_overlap 1403117 1403119 AAGTGAGAAAAAAAA GGACCGC AAAA GCGGTCC TCTTTATTAGTACAA TERM 1512 1403119 - 1403136 + r 90 -12.7 -3.72374 | opp_overlap 1403119, overlap 1403117 AAGTGAGAAAAAAAA GGACCGC AAAA GCGGTCC TCTTTATTAGTACAA CBU_1451 1405282 - 1403714 - | hypothetical protein TERM 1513 1406526 - 1406512 - R 72 -3.5 -5.03747 | opp_overlap 1406514 AAAGGGGGCAAAAAA GCCGT CGATC ACGAC CTTCAATAGTTTTTT TERM 1514 1408099 - 1408083 - R 88 -3.7 -5.86061 | overlap 1408085 CGCCAGCAAAAAAAA TACAGAA CGT TTCTGAA GACTGCCTGCTTCCT TERM 1515 1408097 - 1408085 - R 77 -6.3 -4.5787 | overlap 1408083 CCAGCAAAAAAAATA CAGAA CGT TTCTG AAGACTGCCTGCTTC CBU_1457 1412027 - 1409997 - | tetratricopeptide repeat family protein CBU_1458 1412209 - 1413369 + | hypothetical ATPase CBU_1458a 1413638 - 1413492 - | hypothetical protein TERM 1516 1413965 - 1413946 - g 100 -3.4 -5.81412 | opp_overlap 1413946 1413951 GCCACCGAAAAAAAA CGAGGGGA AGAA TCGCCGCG ATTTTTTCTTACCTC TERM 1517 1414095 - 1414076 - g 83 -2.8 -5.47218 | opp_overlap 1414076 GGTCATGGAAAAAAA GGGCAATA AACG CATTGTCC TATGTTGTGATTCCC CBU_1459 1413736 - 1414116 + | hypothetical protein CBU_1460 1414949 - 1414164 - | hypothetical protein TERM 1518 1415524 - 1415540 + r 70 -3.5 -4.83759 | opp_overlap 1415517 TTTCAAAAGTTGTTC CCAACGC TGC GCGAGGG TTTTTAAATTTGATT CBU_1462a 1417934 - 1417770 - | hypothetical protein TERM 1519 1417905 - 1417951 + g 86 -13.4 -3.09516 | opp_overlap 1417905 1417911, overlap 1417911 GCGCGTATGAGCGAA GCGAAATACGGG-GACAATAGA CGACA TC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC TERM 1520 1417951 - 1417905 - G 81 -11.9 -3.09516 | opp_overlap 1417905 1417911, overlap 1417911 GCGCGTATGAGCGAA GCGAAATACGGGGA-CAATAGAC GAC ATC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC TERM 1521 1418116 - 1418172 + r 73 -7.9 -3.82117 | opp_overlap 1418119 1418133, overlap 1418119 AGAGGACAGAGGACT GAAGACAGAAGACTGAATGTTGTCGCG AAG CGACACAACTATCTGCCTTCTGTCCTC TGTTTTCTGAATGGG TERM 1522 1418169 - 1418119 - R 75 -10.4 -3.12606 | opp_overlap 1418116 1418119, overlap 1418133 GGACAGAGGACTGAA GACAGAAGACTGAATGTTGTCGCG AAG CGACACAACTATCTGCCTTCTGTC CTCTGTTTTCTGAAT CBU_1463 1418492 - 1418295 - | hypothetical protein TERM 1523 1418349 - 1418369 + g 100 -14.1 -4.59773 | GCGGGCGTTCGGCGG GAGCAAAGC TGT GCTTTGCTC TTTTTCCGCCTCACC TERM 1524 1418459 - 1418435 - G 100 -9.9 -5.89827 | AAGTACCAAAAAAAA GCCCCGGAATC ATC GACCCTGGGGC ACAGAAGATAGCTGA hupB 1418779 - 1418495 - | DNA-binding protein HU TERM 1525 1419328 - 1419302 - g 77 -11.6 -2.64155 | opp_overlap 1419293, overlap 1419299 1419298 TGTTCGTGAAAGTTA TCCGGATCTGAC GGC GCTAGATCCGGA AGATCATCATTATGA CBU_1465 1419084 - 1419542 + | hypothetical protein CBU_1466 1419547 - 1419888 + | hypothetical protein tldD 1421298 - 1419865 - | microcin-processing peptidase 2 (TldD) CBU_1468 1424830 - 1421369 - | hypothetical protein TERM 1526 1421497 - 1421469 - G 71 -9.5 -3.01712 | GCCGCTTTGCCAACA TGGGGGGCCAGTA TTT TATCGGCCACCCA GGCGATTACGCCGGC TERM 1527 1422862 - 1422842 - G 81 -6.1 -4.90778 | GTTATTTAAAGAAAA TTGGCCGTC CTT AACGGCTAA CTGGCCTTCGGCTCT TERM 1528 1424727 - 1424703 - G 83 -4.2 -5.41143 | opp_overlap 1424687 CAGTGCTCAAAAAAA TCGCGCTGGT GGTTG AGCAGCGGGA CGGTCATACGAACAC mreD 1425318 - 1424830 - | rod shape-determining protein mreC 1426202 - 1425324 - | rod shape-determining protein TERM 1529 1426135 - 1426121 - G 70 -6.4 -4.18018 | CCTTTTGATCTAAAA CGATCA ATG CGATCG CTAGCCCCATATAAA TERM 1530 1426230 - 1426246 + r 73 -6.6 -4.17048 | ACCAGCGGGAGCTCA GAATGC GTCAA GCATTC TTCTTTTGAAGACAG mreB 1427343 - 1426285 - | rod shape-determining protein CBU_1472 1427545 - 1427745 + | hypothetical protein TERM 1531 1428153 - 1428131 - g 76 -4 -5.05782 | overlap 1428111 ACTTATTTCAAAAAA GCGCACCCCA AGT TGAAGCGGGC CTTTATATGGTTCCT gatC 1427893 - 1428192 + | glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit gatA 1428196 - 1429647 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1532 1430572 - 1430558 - g 87 -8.6 -4.56597 | CTCCCTTGGGAAAAA CGCAAA CGC TTTGCG GCTAGTTATCAATTA gatB 1429652 - 1431085 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1533 1431123 - 1431137 + T 73 -10 -2.76265 | overlap 1431122 AGAAGACAGTGGTTG TGTGGC TTC GCCACA ATTAATTTATAAAAT oxyR 1432164 - 1431229 - | hydrogen peroxide-inducible genes activator TERM 1534 1431973 - 1431957 - G 82 -9.3 -4.17048 | opp_overlap 1431956 1431954 1431953 CTTCTTGCAAAATAA CGCGGAC TTG GGCCGCG ATAATTTGACCGATC CBU_1477 1432292 - 1432831 + | anti-oxidant AhpCTSA family protein TERM 1535 1432904 - 1432855 - g 100 -21.1 -3.1505 | opp_overlap 1432855 1432860 1432866, overlap 1432860 1432866 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 1536 1432855 - 1432904 + G 100 -21.1 -3.14931 | opp_overlap 1432855 1432860 1432866, overlap 1432860 1432866 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 1537 1432860 - 1432899 + G 86 -12.4 -3.20723 | opp_overlap 1432855 1432860 1432866, overlap 1432855 1432866 CCCGTATGAAGCGAA GCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGC TTCGCTTCATACGGG TERM 1538 1432899 - 1432860 - g 86 -12.4 -3.20723 | opp_overlap 1432860 1432855 1432866, overlap 1432855 1432866 CCCGTATGAAGCGAA GCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGC TTCGCTTCATACGGG ahpD 1432850 - 1433467 + | alkylhydroperoxidase TERM 1539 1433469 - 1433492 + T 93 -11 -4.69464 | opp_overlap 1433467 1433465 1433463 1433470, overlap 1433470 AGAATAAAACATAGC AGGTTGAGCC GACA GGCTCAACCC TTTTTAAAGTCTTTT TERM 1540 1433470 - 1433491 + T 100 -14.5 -3.40051 | opp_overlap 1433467 1433465 1433463 1433470, overlap 1433469 GAATAAAACATAGCA GGTTGAGCC GACA GGCTCAACC CTTTTTAAAGTCTTT TERM 1541 1433491 - 1433470 - T 93 -14.5 -2.89379 | opp_overlap 1433470 1433469, overlap 1433467 1433465 1433463 GAATAAAACATAGCA GGTTGAGCC GACA GGCTCAACC CTTTTTAAAGTCTTT CBU_1479 1433888 - 1433496 - | hypothetical protein CBU_1480 1434562 - 1433912 - | hypothetical protein TERM 1542 1433997 - 1433983 - G 100 -4.2 -5.98781 | opp_overlap 1433983 TAGAATGAAAAAAAA GCGTTA GAT TGACGC TTTTGATAGCTTCCC TERM 1543 1433983 - 1433997 + g 73 -6.4 -4.30978 | opp_overlap 1433983 TAGAATGAAAAAAAA GCGTTA GAT TGACGC TTTTGATAGCTTCCC TERM 1544 1434183 - 1434201 + g 74 -3.8 -4.93318 | overlap 1434184 TCTTTGCGATGCGTA TCGCTGAT AAA ATAAGCGG TTTTTATAAATTGTA CBU_1481 1434912 - 1434559 - | hypothetical protein TERM 1545 1434988 - 1435002 + r 73 -10 -2.76265 | overlap 1434987 AGAGGACAGTGTTCG TGTGGC TTC GCCACA ATTAATTTATAAAAT CBU_1482 1435882 - 1435133 - | SPFH domain-containing protein/band 7 family protein CBU_1483 1437258 - 1435882 - | nfeD family protein TERM 1546 1436260 - 1436242 - G 83 -11.8 -3.1855 | GCCGCCAATACCCAA CATGCCAA AAC TTGGCATG AAAGCTTCCGCAACA TERM 1547 1436777 - 1436793 + g 72 -3.6 -5.01676 | GCGGTTTTTTGCGCC GGTGCT TTTTT AGCTCC TTCTTTTTTTTCGTT TERM 1548 1437824 - 1437838 + G 70 -7 -4.09243 | overlap 1437825 CGCTGTTATCGGCTC AGCGCC CGT GGCGCA TTTTGCAAACCTGTA TERM 1549 1437825 - 1437837 + G 73 -10.5 -3.05224 | overlap 1437824 GCTGTTATCGGCTCA GCGCC CGT GGCGC ATTTTGCAAACCTGT TERM 1550 1438167 - 1438186 + G 87 -7.8 -5.17576 | gap 1 TCTCTAATCTGGCTT GGCATCGCC GTC GGCGG-GCC TTTTTTCGGTTGGTG CBU_1484 1437348 - 1438634 + | transporter, MFS superfamily CBU_1485 1439308 - 1438631 - | cyclin domain-containing protein TERM 1551 1438732 - 1438718 - G 100 -4.2 -5.9362 | GAAAAGAGAAAAAAA CGATAG ATT CGATCG CCTTGCCTCCACTAA TERM 1552 1439505 - 1439523 + G 71 -10.2 -2.71731 | AGCGCACCTGTGCGC AGCGCACC GAA GGTGCGCC TAGTTCCCGCCTGCG CBU_1486 1439405 - 1439572 + | hypothetical protein cysS 1441008 - 1439626 - | cysteinyl-tRNA synthetase TERM 1553 1439707 - 1439721 + g 81 -3.5 -5.40072 | ATCGCGAATTTGATC GGCTG TTTTC CAGTC TTTTTTTGCGCGAGC TERM 1554 1440189 - 1440206 + g 100 -4.1 -5.80003 | opp_overlap 1440189 1440188 GAATAGAAATAATAT TGCCCAA CGAT TTGGACA TTTTTTCTTTATTAA TERM 1555 1440381 - 1440363 - G 74 -11 -2.78032 | opp_overlap 1440363, overlap 1440362 1440360 GTTGGCCCAAAATAC TGCTCGAC ATC GCCGAGCA TTCAATATGCCAGCC TERM 1556 1440735 - 1440755 + g 83 -7.5 -4.8743 | ATATCTGAATAAACC GCTCGGC TAATGCT GCCGGGC TTTCTTTATTTTCCC gltX-2 1442396 - 1440999 - | glutamyl-tRNA synthetase TERM 1557 1442374 - 1442362 - G 71 -7.7 -3.82097 | CCCAAATGCATCAAA CCAGT AGG ACTGG GACAGAAACGGCTTT lpxH 1442553 - 1443284 + | UDP-2,3-diacylglucosamine hydrolase higA 1443664 - 1443353 - | addiction module antidote protein CBU_1491 1444008 - 1443670 - | plasmid maintenance system killer protein TERM 1558 1444060 - 1444072 + H 72 -10.5 -2.53876 | TGAATTTGCCTACCA CGGCC GTA GGCCG TAGGTTGGGCTGAGC TERM 1559 1444090 - 1444109 + H 73 -5.7 -4.52042 | overlap 1444075 GGTTGGGCTGAGCTT GCGAAGC CCAACA GTTTCGC TTTCTTCCTTTTTGT CBU_1492 1444367 - 1445512 + | ISAs1 family transposase TERM 1560 1445670 - 1445718 + F 80 -2.4 -5.69262 | gap 2, opp_overlap 1445674 1445675, overlap 1445671 1445672 ACTCCTTGTATTAAA AGAAT-TTTCTG-GGTCCCGCGGT CAA GCCGCGGGACGACGGAAATGTGCA TTTTTATTTTTGTCG TERM 1561 1445712 - 1445674 - f 76 -7.3 -4.25256 | opp_overlap 1445672 1445671 1445670, overlap 1445675 CTTGTATTAAAAGAA TTTTCTGGGTCCCGCGG TCAAG CCGCGGGACGACGGAAA TGTGCATTTTTATTT TERM 1562 1445712 - 1445675 - f 79 -10.6 -3.14672 | gap 1, opp_overlap 1445672 1445671 1445670, overlap 1445674 TTGTATTAAAAGAAT TTTCTG-GGTCCCGCGG TCAAG CCGCGGGACGACGGAAA TGTGCATTTTTATTT CBU_1493 1445840 - 1447513 + | hypothetical protein pdxJ 1448442 - 1447687 - | pyridoxal phosphate biosynthetic protein TERM 1563 1448563 - 1448595 + r 76 -7.1 -4.27192 | opp_overlap 1448572, overlap 1448566 AAATGAGACACTAAC TGTTCATAATGTCGT CTA ACGACAGTATGATTA TTTTCATAAGCCTTT TERM 1564 1448566 - 1448592 + r 90 -11 -4.25256 | opp_overlap 1448572, overlap 1448563 TGAGACACTAACTGT TCATAATGTCGT CTA ACGACAGTATGA TTATTTTCATAAGCC TERM 1565 1448586 - 1448572 - R 70 -8.6 -3.31501 | opp_overlap 1448566 1448563 ACTAACTGTTCATAA TGTCGT CTA ACGACA GTATGATTATTTTCA TERM 1566 1449007 - 1449021 + r 74 -4.9 -4.80853 | overlap 1449008 TTTTTGGCAAGCGCT TCCGC TAAAT GCGGG TTATTTTTTTCAACT TERM 1567 1449845 - 1449825 - R 70 -3.4 -4.99043 | gap 1, opp_overlap 1449830, overlap 1449827 TCTTTAGAAATAAAA CTTCTTCTT CTGA AAGA-GAAG ATGTATAACCATAAC TERM 1568 1450588 - 1450568 - R 73 -8.3 -3.73775 | opp_overlap 1450568 1450567 GCGACGTTCAGTAAA TTCGCAAGG TTA CCTTGGGAA ATTTTAACAAAACCC CBU_1497 1450985 - 1450854 - | hypothetical protein TERM 1569 1451239 - 1451229 - R 85 -6.8 -5.03314 | opp_overlap 1451228 CGCACTCTGAAAAAA CTCG CAT CGAG ATCACTTAGTGCGTG TERM 1570 1452055 - 1452065 + r 73 -5.4 -4.58283 | opp_overlap 1452055 1452059 1452062, overlap 1452062 GCTAACCGGCGCAAA GCAA GGA TTGC TTTTTCAAGCAATTC recO 1453022 - 1452327 - | DNA repair protein era 1453906 - 1453019 - | GTP-binding protein CBU_1503 1454604 - 1453903 - | ribonuclease III TERM 1571 1454591 - 1454609 + g 71 -4.6 -4.60487 | overlap 1454595 CGTTCCATTAACTTG TTAAGATG GTT CATCTCAA TTTTTGAAACTCCTA lepB-2 1455395 - 1454625 - | signal peptidase I lepA 1457236 - 1455392 - | GTP-binding protein LepA CBU_1506 1457809 - 1457372 - | thioesterase family protein CBU_1507 1460054 - 1457826 - | copper-exporting ATPase TERM 1572 1459771 - 1459781 + g 80 -5.4 -5.09895 | opp_overlap 1459771 AAACCAACGACAGCA GCAA AAA TTGC TTTTTTAAGTAAATC CBU_1508 1461708 - 1460077 - | hypothetical ATPase tilS 1463135 - 1461786 - | tRNA(Ile)-lysidine synthase accA 1464061 - 1463111 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 1573 1464335 - 1464345 + G 91 -6.8 -5.40072 | GTTAGGCGACGCTTT TGCC GAT GGCA TTTTTTTAGGCGCAG TERM 1574 1464354 - 1464365 + G 74 -7.2 -4.27211 | GATGGCATTTTTTTA GGCG CAGC CGCC TTTCATTTATTTCCC CBU_1511 1464210 - 1464995 + | ZIP family protein CBU_1512 1465705 - 1464992 - | rhodanese domain-containing protein CBU_1513 1466485 - 1465709 - | short chain dehydrogenase/reductase family oxidoreductase TERM 1575 1466246 - 1466260 + g 71 -4.2 -4.86731 | overlap 1466234 1466248 CGGTTGCCACTCAGT CGGCAA TTC TTGCAG TTTTCTTTCCACAGC CBU_1514 1466796 - 1467296 + | short chain dehydrogenase/reductase family oxidoreductase CBU_1515 1467300 - 1467518 + | hypothetical protein CBU_1516 1467682 - 1467933 + | hypothetical protein CBU_1517 1468222 - 1468680 + | RNA methyltransferase gpsA 1469706 - 1468708 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) TERM 1576 1468882 - 1468857 - G 86 -11.1 -4.00038 | opp_overlap 1468857 1468880 GATCAGTATTATAAA GGCCTTCGATC GCTT GACCGATGGCC TGTTGGGCTTCTTTT TERM 1577 1468857 - 1468882 + g 70 -8.9 -3.14422 | opp_overlap 1468857, overlap 1468880 GATCAGTATTATAAA GGCCTTCGATC GCTT GACCGATGGCC TGTTGGGCTTCTTTT TERM 1578 1468880 - 1468890 + g 71 -4.6 -4.72201 | opp_overlap 1468857, overlap 1468857 ATCGCTTGACCGATG GCCT GTT GGGC TTCTTTTTTATCGAC TERM 1579 1468987 - 1469004 + g 72 -7.7 -3.90744 | ATCCCCTAAGCCAGC GAGACCC GTGA GGGTTTC TTGTTTACCGCCAAA secB 1470260 - 1469775 - | protein-export chaperone SecB TERM 1580 1469969 - 1469979 + g 79 -4 -5.31275 | overlap 1469963 TCGGTCGCATTTCCT CTTT AGG AAAG TTTTTTATGGTGAAA grxC 1470530 - 1470273 - | glutaredoxin CBU_1521 1470969 - 1470535 - | rhodanese domain-containing protein CBU_1522 1471144 - 1471019 - | hypothetical protein TERM 1581 1472425 - 1472397 - R 80 -10.4 -3.71527 | opp_overlap 1472397 1472401, overlap 1472401 CCGCAAGCAGGGAAA CAAAGCGTCTTA AATCG TAAGGCGCTTTG TTTCTTCCGGGTCGT TERM 1582 1472397 - 1472425 + r 100 -12.6 -4.1711 | opp_overlap 1472397 1472401, overlap 1472401 CCGCAAGCAGGGAAA CAAAGCGTCTTA AATCG TAAGGCGCTTTG TTTCTTCCGGGTCGT TERM 1583 1472421 - 1472401 - R 70 -5.4 -4.47786 | opp_overlap 1472397 1472401, overlap 1472397 AAGCAGGGAAACAAA GCGTCTTA AATCG TAAGGCGC TTTGTTTCTTCCGGG TERM 1584 1472401 - 1472421 + r 83 -7.6 -4.67607 | opp_overlap 1472401 1472397, overlap 1472397 AAGCAGGGAAACAAA GCGTCTTA AATCG TAAGGCGC TTTGTTTCTTCCGGG TERM 1585 1473082 - 1473070 - R 71 -4.9 -4.65182 | CATAAACCAAACAAA TTCTT TTT AAGAA ATATGGAAATCATAT CBU_1526a 1475581 - 1475486 - | hypothetical protein TERM 1586 1475525 - 1475561 + g 100 -22.3 -4.70659 | overlap 1475528 CAATTCTAATTTTGG GAGCGTCGTCCCGCGGT CAA GCCGCGGGACGACGTGC TTTTTAAATCTCAAA TERM 1587 1475528 - 1475558 + g 100 -24.8 -3.27476 | overlap 1475525 TTCTAATTTTGGGAG CGTCGTCCCGCGGT CAA GCCGCGGGACGACG TGCTTTTTAAATCTC TERM 1588 1476345 - 1476322 - R 79 -5.4 -4.92314 | gap 1, overlap 1476343 ATCAATCGACAAAAA TGGTTC-GCTT ATC AAGCAAAACCA AATCTCATTGGAGAA TERM 1589 1476918 - 1476892 - R 77 -9.4 -3.50569 | overlap 1476890 ACTGCAAAAAAACCA GCAGGCGGCACA CCT TACACCACCTGC AATCGCTTACTCGCC TERM 1590 1476929 - 1476947 + r 73 -8.8 -3.62476 | CCTGCAATCGCTTAC TCGCCTTG CCG CTAGGCGA TTATCTGGTTAATTA CBU_1529 1479117 - 1477207 - | peptidase catalytic domain protein of S9A/B/C families TERM 1591 1477475 - 1477485 + g 74 -3.2 -5.07486 | overlap 1477471 ATTGGCGAACGCGCA TCGT AAA GCGA TTTTTGTTCAGGATA TERM 1592 1478523 - 1478537 + g 78 -10 -3.59315 | CCATCCAAAGCTCGG TGCCGT CCC ACGGCA TTTGCGGCTGATTCC CBU_1530 1481121 - 1479184 - | hypothetical membrane spanning protein TERM 1593 1479768 - 1479778 + g 73 -4.6 -4.83032 | overlap 1479768 TATTATTCCTCCCCT CGCG CAA TGCG TTTTGTATTTCGTGT TERM 1594 1481004 - 1480980 - G 84 -7.2 -4.99645 | AGCTCAGAAATAAAA CGATTAACTG CGACT CTGTTAATCG GGGTTCTCCTTCTCC CBU_1530a 1481459 - 1481160 - | hypothetical protein TERM 1595 1481246 - 1481295 + g 100 -20.2 -3.1505 | opp_overlap 1481246, overlap 1481260 AGTAGCCCGTATGAA GCGCAGCGAAATGCCGGGAAAT AAAGGC AATTCCCCGTATTTCGCTGCGC TTCATACGGGCTACT TERM 1596 1481295 - 1481246 - G 100 -18.7 -3.1505 | opp_overlap 1481246 1481260 AGTAGCCCGTATGAA GCGCAGCGAAATGCCGGGAAATA AAGG CAATTCCCCGTATTTCGCTGCGC TTCATACGGGCTACT yibO 1484958 - 1486517 + | phosphoglyceromutase TERM 1597 1486522 - 1486537 + G 100 -4 -5.70522 | overlap 1486523 CGCTGAAATAACTTA TGCAAA GGAT TTTGCG TTTTTTATTATTATT TERM 1598 1486554 - 1486566 + G 70 -6.3 -4.21933 | TTTTTATTATTATTT TCCAT CGC ATGGA TTGTTTTCCCATTCG TERM 1599 1487268 - 1487258 - g 74 -3.2 -5.13016 | AATTAAAACGAAAAA CCAA CGG CTGG CTGAATTATTAGCCG CBU_1537 1486521 - 1487762 + | peptidase family M23/M37 domain-containing protein CBU_1538 1487759 - 1489129 + | C-terminal processing peptidase CBU_1539 1489153 - 1490433 + | tyrosine-specific transport protein CBU_1540 1490460 - 1490789 + | hypothetical protein TERM 1600 1490861 - 1490877 + G 77 -11.5 -2.52896 | opp_overlap 1490871 1490872 TTTTCTGAGTGCGCT GCGCGCT AAA GGCGCGC TGGATTCCCGCCTGC CBU_1541 1490823 - 1490921 + | hypothetical protein CBU_1542 1491285 - 1490956 - | hypothetical membrane associated protein TERM 1601 1491436 - 1491424 - R 70 -3.4 -4.99665 | TAAAAAAAATTAAAA GAAG GCCCG CTTC CACCAGCCGACGCTT CBU_1543 1492165 - 1491599 - | hypothetical protein CBU_1544 1493274 - 1492282 - | IS30 family transposase TERM 1602 1493367 - 1493415 + r 100 -20.5 -3.1505 | opp_overlap 1493372 1493378 1493396 1493399, overlap 1493372 1493396 TTGAATTCACGATGA GCGAAGCGAAATACGGGGAAT AATAACA ATACCCCGTATTCCGCTTCGC TTCATACGGGCTACT TERM 1603 1493410 - 1493372 - R 93 -14 -3.10715 | opp_overlap 1493367 1493372 1493396, overlap 1493378 1493396 1493399 TTCACGATGAGCGAA GCGAAATACGGGGAAT AATAACA ATACCCCGTATTCCGC TTCGCTTCATACGGG TERM 1604 1493372 - 1493410 + r 83 -11.8 -3.20723 | opp_overlap 1493372 1493378 1493396 1493399, overlap 1493367 1493396 TTCACGATGAGCGAA GCGAAATACGGGGAAT AATAACA ATACCCCGTATTCCGC TTCGCTTCATACGGG TERM 1605 1493542 - 1493526 - R 86 -2.4 -5.9663 | overlap 1493532 AAATATCAAAAAAAA TAAATA TAAAT TATTTA AAAAAGAGGTAATAA TERM 1606 1494243 - 1494233 - R 70 -3.2 -4.88217 | AGGAAAAAATGAAAA CTCC GTG GAAG ACGCCGTAAAAAAAC thyA 1495107 - 1494313 - | thymidylate synthase CBU_1548 1495478 - 1495104 - | hypothetical membrane spanning protein TERM 1607 1495271 - 1495261 - G 72 -3.2 -4.93547 | overlap 1495264 TTAATTAACCAAAAA GCAG TTG CTAC AACAAAACCAGCGAC lgt 1496265 - 1495480 - | prolipoprotein diacylglyceryl transferase TERM 1608 1495542 - 1495520 - G 90 -10.6 -4.33151 | overlap 1495523 CACCATAAGGCAAAA CCACCGATGA TAA TCATCGGCAG TGATAATTCTTGCCC TERM 1609 1495539 - 1495523 - G 78 -10.9 -3.14977 | overlap 1495520 CATAAGGCAAAACCA CCGATGA TAA TCATCGG CAGTGATAATTCTTG TERM 1610 1495632 - 1495615 - G 82 -7 -5.00616 | overlap 1495627 1495628 CGGTTGTCGAAAAAA TTCCGC AGTAAA GCGGAA TAATCCGTAACATAA ptsP 1498620 - 1496320 - | phosphoenolpyruvate-protein phosphotransferase TERM 1611 1497458 - 1497438 - G 73 -5.3 -4.62069 | overlap 1497439 CGCCCAGTTTAAAAA GGGGTGTAC CGC GAACACCCA TCACGGCCGGCAACC TERM 1612 1497589 - 1497601 + g 78 -6.3 -4.63928 | AGTCACTTCTTCACT CACTA AAA TAGTG TTTTTAGGATACTCT CBU_1551 1499287 - 1498601 - | dinucleoside polyphosphate hydrolase TERM 1613 1498823 - 1498801 - G 73 -10.4 -2.98823 | opp_overlap 1498798 GCTGTCCGATACATA CCGGCCCGCG ATG CTCGGGGCGG CGAAATTTTTTAGGC TERM 1614 1499202 - 1499164 - G 71 -3.7 -4.77757 | gap 1, opp_overlap 1499191, overlap 1499148 1499166 GGGTAAAAACTAAAA CCCCGTCGTCCCCGCGCA CACG TGCGCAGCG-CACCGAAG GTGCGCCTGGATTCC TERM 1615 1499191 - 1499209 + g 70 -10.2 -2.52896 | opp_overlap 1499164 1499166 CGCGCACACGTGCGC AGCGCACC GAA GGTGCGCC TGGATTCCCGCCTGC TERM 1616 1499351 - 1499369 + r 72 -10.2 -2.52543 | opp_overlap 1499345 GCGCACTAAGTGCGC AGCGCGCT AAA AGCGCGCC TAAATTCCCACGCGT CBU_1552 1499451 - 1499341 - | hypothetical protein CBU_1552a 1499504 - 1499605 + | hypothetical protein TERM 1617 1500716 - 1500729 + G 72 -3.1 -5.00884 | GGCACCGTTTTTCCG CAGCT TTCC AGTTG TTTTTTAACGACAGT TERM 1618 1501037 - 1501025 - g 73 -9.1 -3.53855 | overlap 1501023 TTGCGTAAAAATACA GGCGA TGA TCGCC GCCGCACCCACGATA nrdA 1499627 - 1502452 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1619 1502613 - 1502603 - g 72 -3.2 -5.00884 | ATTCTCCCCAAAAAA CGAA AAA TCCG ATGAGGAGGAAACCG TERM 1620 1503650 - 1503639 - g 73 -3 -5.05782 | opp_overlap 1503639, overlap 1503644 1503647 ATGGATCTCAAAAAA GAAA AGAA TTTC TTTGAAACCCGCGTC TERM 1621 1503660 - 1503644 - g 83 -3.7 -5.42198 | opp_overlap 1503639, overlap 1503639 1503647 1503658 TCTCAAAAAAGAAAA GAATTTC TTT GAAACCC GCGTCATTGAATACC TERM 1622 1503657 - 1503647 - g 71 -4 -4.75934 | opp_overlap 1503639, overlap 1503639 1503644 CAAAAAAGAAAAGAA TTTC TTT GAAA CCCGCGTCATTGAAT nrdB 1502502 - 1503707 + | ribonucleotide-diphosphate reductase subunit beta TERM 1623 1503742 - 1503774 + F 100 -26.5 -3.53012 | TACTCTCACTCACGT TACCCATCAGGCCGC CTT GCGGCCTGATGGGTA TTTAACCGGACAAAA CBU_1555 1504001 - 1505146 + | ISAs1 family transposase TERM 1624 1505438 - 1505450 + G 76 -2.7 -5.1848 | TTTTAGTAACACATT TTTCA TTA TGGAA TTTTTTAAATTAATT TERM 1625 1505663 - 1505675 + G 76 -4.1 -5.14626 | opp_overlap 1505663, overlap 1505658 GGAAGTTAACCAAAA CCAAG AAA TTTGG TTTTATTTTAATGAT CBU_1556 1505256 - 1506959 + | hypothetical membrane spanning protein TERM 1626 1507013 - 1507029 + F 91 -13.7 -2.52896 | opp_overlap 1507024 1507025 CGCACTATGTGCGCT GCGCGCT AAA AGCGCGC TGGATTCCCGCCTGC TERM 1627 1507159 - 1507127 - f 86 -7.6 -5.09426 | gap 1, overlap 1507129 CTTAATTTCAAAAAA CCCCGTCGTCCCCGC GAAG GCGGGGACC-CAGCG CACTTCGTGCGCTGC TERM 1628 1507172 - 1507190 + F 75 -10.2 -3.05816 | overlap 1507187 GCGCACTTCGTGCGC TGCGCGCT AAA AGCGCGCC TTGACTCCCGCCTGC TERM 1629 1507599 - 1507589 - g 74 -2.4 -5.1848 | AAGGAACCTAAAAAA GAGG TCA CCAC GAAAAACCAAGAAAG CBU_1558 1507346 - 1507621 + | FmdB transcriptional regulator family TERM 1630 1507849 - 1507859 + G 70 -5.4 -4.386 | TTTCTGACCGGTCTT TTGG TTA CCAA TTTTGTGGGCCGTTA TERM 1631 1508166 - 1508152 - g 76 -4.2 -5.03314 | GTCACCCCCAAAAAA GATGTC ATT GACCTC CCGGTCACGATCGAA CBU_1559 1507618 - 1508247 + | hypothetical membrane spanning protein CBU_1559a 1508416 - 1508508 + | hypothetical protein CBU_1560 1508557 - 1508682 + | hypothetical protein TERM 1632 1509324 - 1509307 - g 71 -4.1 -4.83615 | gap 1, opp_overlap 1509313 1509314 1509320 GATCGTTGATAAAAA CCATACCC CGT GGG-ACGG ATTGATCGCTTCTTT CBU_1561 1508765 - 1509553 + | hypothetical membrane spanning protein aspS 1512191 - 1514023 + | aspartyl-tRNA synthetase CBU_1566 1514039 - 1514773 + | hypothetical protein TERM 1633 1514795 - 1514839 + F 91 -13 -3.14931 | gap 1, opp_overlap 1514795 1514801, overlap 1514805 CGTAGCCCGTATGAA GCGAAACGA-ATACGGGATTG TTAT CGTTCCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 1634 1514839 - 1514795 - f 91 -13 -3.14931 | gap 1, opp_overlap 1514795 1514805, overlap 1514801 CGTAGCCCGTATGAA GCGAAACG-AATACGGGATTG TTAT CGTTCCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 1635 1515249 - 1515227 - g 72 -6.9 -4.15396 | gap 1 CGCCAAATTAAACAA GCGGTCGTCG GTTA CGGCG-CCGC TACCAAAGCCCAAGT TERM 1636 1515327 - 1515302 - g 75 -4.5 -5.01535 | opp_overlap 1515319 TTACAATTAGAAAAA GCACCACCGGC AGAC GCCGCGGACGC CTTAGCGATTGCGTT ruvC 1514888 - 1515406 + | crossover junction endodeoxyribonuclease ruvA 1515403 - 1516005 + | Holliday junction DNA helicase motor protein TERM 1637 1517509 - 1517497 - g 77 -3.3 -5.24551 | GGAAAGGAAGAAAAA GAGCC TAC GCCTC TCGAGAATAAAAGTT CBU_1569 1516105 - 1517748 + | hypothetical cytosolic protein ruvB 1517858 - 1518913 + | Holliday junction DNA helicase B TERM 1638 1518936 - 1518983 + F 83 -11.7 -3.10343 | gap 2, opp_overlap 1518936, overlap 1518942 1518950 GCCCGTATGAGCGAA GCGAAATACGGGGACAATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGTAT CBU_1570a 1518999 - 1519271 + | hypothetical protein CBU_1570b 1520362 - 1519268 - | transposase TERM 1639 1519305 - 1519325 + g 71 -2.4 -5.10461 | opp_overlap 1519306, overlap 1519306 TCTTGGCGTGTTAAA AGCGCCCA AATGA TCGGCGCA TTTTTATTCGCTAAC TERM 1640 1519367 - 1519381 + g 74 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT CBU_1573 1520477 - 1521712 + | transporter, MFS superfamily tolQ 1521788 - 1522501 + | TolQ tolR 1522479 - 1522922 + | protein TolR TERM 1641 1523013 - 1523027 + F 75 -10 -3.0438 | overlap 1523010 TTCTTTAATTTTTCA GCGCTA TCA TAGCGC TACTTCTTATTCGTC TERM 1642 1523328 - 1523312 - g 88 -3.7 -5.52384 | CTCCTACTAAAAAAA GGGTT AACGAAG AACCC CGGCCTTCCACATCG TERM 1643 1525160 - 1525142 - g 78 -6 -4.63172 | opp_overlap 1525142 GATTAAAGCACAAAA GCGAAAAA TTA TTTATCGC TGCTATGGCTGCACT CBU_1576 1523065 - 1525584 + | hypothetical membrane spanning protein CBU_1577 1526494 - 1525550 - | LysM domain-containing protein TERM 1644 1525787 - 1525801 + g 76 -10 -3.41693 | TTTTCCGTCGTTTTG CCCTAC CAC GTAGGG TTGATTAATGATGAG TERM 1645 1526194 - 1526182 - G 79 -6.9 -4.67697 | TGGGAAAATAATAAA GCCGC ATA GCAGC CAAATTAATGACAAT CBU_1578 1527333 - 1526497 - | YihY family protein TERM 1646 1526824 - 1526805 - G 76 -4.2 -5.10033 | GCAAGACAAATAAAA GCCCCTTT CCCA AATAGGGC CATCCAATAAGGTCC CBU_1579 1527444 - 1528037 + | NAD(P)H:quinone oxidoreductase, type IV CBU_1580 1528034 - 1529131 + | ATPase, AFG1 family TERM 1647 1529411 - 1529373 - f 86 -11.8 -3.28416 | opp_overlap 1529375, overlap 1529374 1529387 GAGGATCCAGATTAA GGGGCTAAGAAAAACACC AAC GGCGCTTTTCTTAGCCTT TTAGCCTGGATTCCC TERM 1648 1529410 - 1529374 - f 95 -15.3 -2.56728 | opp_overlap 1529375, overlap 1529373 1529387 AGGATCCAGATTAAG GGGCTAAGAAAAACACC AAC GGCGCTTTTCTTAGCCT TTTAGCCTGGATTCC TERM 1649 1529375 - 1529409 + F 100 -14.4 -4.15453 | opp_overlap 1529374 1529373 1529387 GGATCCAGATTAAGG GGCTAAGAAAAACACC AAC GGCGCTTTTCTTAGCC TTTTAGCCTGGATTC TERM 1650 1529397 - 1529387 - f 76 -4.6 -5.06816 | opp_overlap 1529375, overlap 1529374 1529373 AGGGGCTAAGAAAAA CACC AAC GGCG CTTTTCTTAGCCTTT TERM 1651 1529458 - 1529496 + F 76 -4.5 -5.07053 | gap 1 AAGCCCTCGATTCTC TGTCTGTCGTAGACG-GC CTAC GCACGGGAACGACGGACA TTTTTTCAACTCCTT CBU_1581 1529542 - 1529664 + | hypothetical protein shaG 1530085 - 1529705 - | Na(+)/H(+) antiporter subunit G shaF 1530380 - 1530078 - | Na(+)/H(+) antiporter subunit F shaE 1530724 - 1530377 - | Na(+)/H(+) antiporter subunit E shaD 1532220 - 1530721 - | Na(+)/H(+) antiporter subunit D TERM 1652 1530878 - 1530901 + g 70 -7.4 -3.92369 | opp_overlap 1530869 AATAAAGAAAATTTT TCGCCCGTTG AAAG CAACGCGTGA TCTTCTTTTTTAGAT CBU_1586 1532588 - 1532217 - | Na(+)/H(+) antiporter subunit C shaB 1532992 - 1532585 - | putative monovalent cation/H+ antiporter subunit B shaA 1535295 - 1532989 - | putative monovalent cation/H+ antiporter subunit A TERM 1653 1534038 - 1534028 - G 74 -3.2 -5.17488 | AATACCAAAAGAAAA GCCA GCA TAGC CATGATCATGTTAGA TERM 1654 1534159 - 1534145 - G 85 -9.2 -4.35017 | TAAAAACCTAATAAA GGCGGA AGC CCCGCC ATCGAAGCGCCAGCG TERM 1655 1534853 - 1534807 - G 78 -8.8 -4.07133 | gap 3 CACCGTGACAAACAA GGCTTG--CACG-GCGGCCTTCC GCGC GGCAGGCCGCTCGTGCTCAAGAC CAATAAGCAAAAAAG TERM 1656 1534919 - 1534896 - G 76 -4 -5.055 | TTAATTCCCAAAAAA CAAATAAC ACAATTAA GTTATTTG CTAAAACCAATCCCA TERM 1657 1535100 - 1535090 - G 73 -2.6 -5.15526 | ACATAAAATGAAAAA TTAA TAT TTAA GTCGGGAAACCAACG TERM 1658 1535206 - 1535189 - G 74 -4.1 -4.96657 | overlap 1535197 1535205 ATAAAGAGAAGAAAA GGGATTA AGGC TAAACCC CAGCCGAGTCTAGGT TERM 1659 1535391 - 1535371 - R 90 -12.6 -3.54307 | opp_overlap 1535367, overlap 1535360 AATACTCTCGCGAAA GAGGGGGA GTTAA TCCCCCTC AAACTATTGCTATTT CBU_1589 1535724 - 1535416 - | hypothetical membrane associated protein TERM 1660 1535704 - 1535691 - G 75 -9.5 -3.50532 | overlap 1535687 ACCCAAATGAAGTAA CGCCC AATC GGGCG CAATGATGATGATGA TERM 1661 1536683 - 1536663 - g 79 -2.5 -5.35224 | overlap 1536664 1536669 1536670 CGCATAAAAAGAAAA CGAAAGCCC TAG AGACTTTCT GGGAAGTCATCGACG nhaP.2 1535813 - 1537066 + | Na(+)/H(+) antiporter NhaP TERM 1662 1537131 - 1537178 + F 83 -11.7 -3.10343 | gap 2, opp_overlap 1537131, overlap 1537137 1537145 GCCCGTATGAGCGAA GCGAAATACGGGGACAATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGTAT CBU_1590a 1537194 - 1537466 + | hypothetical protein CBU_1590b 1538557 - 1537463 - | transposase TERM 1663 1537500 - 1537520 + g 71 -2.4 -5.10461 | opp_overlap 1537501, overlap 1537501 TCTTGGCGTGTTAAA AGCGCCCA AATGA TCGGCGCA TTTTTATTCGCTAAC TERM 1664 1537562 - 1537576 + g 74 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 1665 1538731 - 1538745 + G 74 -7.8 -4.07885 | overlap 1538732 CAATAACGCTTTCGA TGTCGC TAT GCGACG TTTTAAACGAGCGTG rpsU 1538657 - 1538917 + | SSU ribosomal protein S21P TERM 1666 1539087 - 1539063 - g 72 -7.8 -3.99957 | TCAAACAGCGAGAAA TCGACGAGCA AATCA CGCTCGACGA CGCTGGCGTCATGAA CBU_1594 1538945 - 1539394 + | GatB/Yqey domain-containing protein TERM 1667 1539470 - 1539414 - f 83 -11.8 -3.14931 | gap 1, opp_overlap 1539397 1539396 1539414 1539419, overlap 1539419 CGTAGTCCGTATGAA GCGAAGCGGAATACGGGGTATTTGA TTGAAGCT TTTAATTCCC-GTATTCCGCTTCGC TTCATACGGGCTACG TERM 1668 1539414 - 1539470 + F 100 -16.2 -3.14931 | gap 1, opp_overlap 1539414 1539419, overlap 1539397 1539396 1539419 CGTAGTCCGTATGAA GCGAAGCGGAATACGGGGTATTTGA TTGAAGCT TTTAAT-TCCCGTATTCCGCTTCGC TTCATACGGGCTACG TERM 1669 1539688 - 1539706 + G 73 -3 -5.16237 | overlap 1539681 GTTTTGGATGCGCTG CTCACGGC AAC GCCATTAG TTTTTTAATGGCCTT TERM 1670 1540675 - 1540686 + G 83 -5.8 -5.27923 | AACATTTACGGCCGA TGCC AAGA GGCA TTTTTTATCAACTTC dnaG 1539435 - 1541153 + | DNA primase TERM 1671 1542257 - 1542245 - g 74 -3.3 -5.0538 | CGTTATGGCAAAAAA GCGCC GGC AACGC TCAAACATCAAAAAG rpoD 1541273 - 1543369 + | RNA polymerase sigma factor TERM 1672 1543473 - 1543439 - T 85 -11.4 -3.27525 | opp_overlap 1543439, overlap 1543434 TCTTCGCAAAGCTAA GTAGCTCGTATGCAGC GAA GCGGAATACGGGCTAC TTGTTGAAAACCTAC TERM 1673 1543439 - 1543473 + T 95 -13.6 -3.62046 | opp_overlap 1543439 1543434 TCTTCGCAAAGCTAA GTAGCTCGTATGCAGC GAA GCGGAATACGGGCTAC TTGTTGAAAACCTAC CBU_1597 1543603 - 1543493 - | putative lipoprotein CBU_1600 1546610 - 1546065 - | opacity family porin protein TERM 1674 1546779 - 1546745 - H 93 -13.6 -3.09516 | opp_overlap 1546745 GGGCCGAGTAGCTAA GTAGCCCGTATGCAGC GAA GCGAAATACGGGCTAC TTAGCTACTCGGCCC TERM 1675 1546745 - 1546779 + H 81 -11.4 -3.09516 | opp_overlap 1546745 GGGCCGAGTAGCTAA GTAGCCCGTATGCAGC GAA GCGAAATACGGGCTAC TTAGCTACTCGGCCC TERM 1676 1547193 - 1547177 - g 76 -3.7 -5.09245 | TCAAAAGGACAAAAA CACAG TGATTAC CTGTG AAGCGGATATCTATG CBU_1601 1546941 - 1547426 + | hypothetical protein rimK 1547423 - 1548328 + | ribosomal protein S6 modification protein TERM 1677 1549310 - 1549300 - g 71 -2.4 -5.16472 | AAAAAGGCGAAAAAA GGAG AGT CGCC CATTAATTATTTACA CBU_1603 1548331 - 1549359 + | succinylglutamate desuccinylase/aspartoacylase family protein TERM 1678 1550534 - 1550546 + T 82 -4.1 -5.42259 | CGTTTAGCGTTATTT TTCCT TTT GGGAA TTTTTTTAACGCTAA TERM 1679 1551423 - 1551437 + T 90 -8.6 -4.87133 | TTATTCAAGAAGGCC CCAATG CAC CATTGG TTTTGTTTAAAGGAT CBU_1607 1552408 - 1552010 - | hypothetical protein TERM 1680 1552429 - 1552468 + r 88 -11.6 -3.57901 | opp_overlap 1552437 1552440, overlap 1552431 1552437 TTCGCCTTATTTTTT AATAGAAATACCACGGGC TTAC GCCCGTGCTATTTTTATC TCTGTTTTTAATCGC TERM 1681 1552431 - 1552466 + r 100 -14.2 -3.35531 | opp_overlap 1552437 1552440, overlap 1552429 1552437 CGCCTTATTTTTTAA TAGAAATACCACGGGC TTAC GCCCGTGCTATTTTTA TCTCTGTTTTTAATC TERM 1682 1552437 - 1552460 + r 93 -11 -5.1104 | opp_overlap 1552437 1552440, overlap 1552431 1552429 ATTTTTTAATAGAAA TACCACGGGC TTAC GCCCGTGCTA TTTTTATCTCTGTTT TERM 1683 1552460 - 1552437 - R 90 -11 -4.19177 | opp_overlap 1552437 1552431 1552429, overlap 1552440 ATTTTTTAATAGAAA TACCACGGGC TTAC GCCCGTGCTA TTTTTATCTCTGTTT TERM 1684 1552457 - 1552440 - R 83 -12.7 -2.81182 | opp_overlap 1552437 1552431 1552429, overlap 1552437 TTTTAATAGAAATAC CACGGGC TTAC GCCCGTG CTATTTTTATCTCTG TERM 1685 1552539 - 1552516 - R 95 -13.2 -3.72576 | CGCTCGGCGAGCAAA GAGGGAGAAC CGTG GTTCTCCCCC CCCCCTTTGGAATCC TERM 1686 1552591 - 1552572 - R 75 -10 -3.17392 | opp_overlap 1552572 CATCGCGTAAGTTAA CCCTATCC TAAC GGACAGGG TTTTGAGGAATTATA TERM 1687 1552572 - 1552591 + r 75 -7.8 -4.12198 | opp_overlap 1552572 CATCGCGTAAGTTAA CCCTATCC TAAC GGACAGGG TTTTGAGGAATTATA TERM 1688 1554220 - 1554243 + r 85 -6.8 -5.13527 | gap 1 CTATCTGTGGCATCG TGAAGCGGGGT TTG ACCTC-CTTCA TTTTGTTTATTGATT CBU_1612 1555697 - 1555602 - | hypothetical protein CBU_1613 1555956 - 1555801 - | hypothetical protein CBU_1614 1556408 - 1555989 - | hypothetical protein TERM 1689 1556029 - 1556017 - G 71 -4.8 -4.46854 | TTATTGAACAAGAAA CAGC AGGCA GCTG TACAATCATCTAGAT TERM 1690 1556363 - 1556349 - G 70 -5.7 -4.34402 | opp_overlap 1556349 TTTTTTAGATGAAAA GCTTG GAAAA CAAGC TTCATAAATTCTTTT TERM 1691 1556562 - 1556573 + H 72 -4.4 -4.75174 | CATGTCACTTTTAAG GCTA TTAA TAGC TTTTTGACTTACCTC TERM 1692 1557896 - 1557934 + H 70 -5.6 -4.31397 | opp_overlap 1557901, overlap 1557895 1557892 1557897 AAATACAGGTCGAAT ATTAATTTCTTAATATTA AAT TAATATTAAGAAATAGAA TTATTTTATAAAAAT TERM 1693 1557897 - 1557933 + H 70 -9.1 -3.18115 | opp_overlap 1557901, overlap 1557895 1557896 1557892 AATACAGGTCGAATA TTAATTTCTTAATATTA AAT TAATATTAAGAAATAGA ATTATTTTATAAAAA TERM 1694 1557929 - 1557901 - H 86 -12.1 -3.36749 | opp_overlap 1557895 1557897 1557896 1557892 CAGGTCGAATATTAA TTTCTTAATATTA AAT TAATATTAAGAAA TAGAATTATTTTATA CBU_1618 1558036 - 1558389 + | hypothetical protein TERM 1695 1558706 - 1558731 + F 71 -4.1 -4.85599 | gap 1, opp_overlap 1558698 1558712, overlap 1558711 1558712 AACCAATCTCCGCCC TTTAAA-CGAGC AAA GCTCGATTTCAA TTTTTCTGAGATGAA TERM 1696 1558724 - 1558712 - f 74 -9.1 -3.53012 | opp_overlap 1558711 1558706 1558712, overlap 1558698 TCTCCGCCCTTTAAA CGAGC AAA GCTCG ATTTCAATTTTTCTG CBU_1621 1559190 - 1559327 + | hypothetical protein icmB 1562353 - 1559342 - | IcmB TERM 1697 1560997 - 1560977 - G 74 -7.6 -4.16787 | gap 1, overlap 1560978 AGAACGAAATAATAA TGCGCCGTG CGTC CACGGCG-A GGCGGGGCGAAAGAG TERM 1698 1561764 - 1561745 - G 79 -9.4 -3.794 | CCCCAACCCATTAAA TTCGTTCA CTAC TGAACGAA CAAAAGAGTCGTGAT icmJ 1563064 - 1562426 - | IcmJ TERM 1699 1562548 - 1562559 + g 90 -4.4 -5.51046 | TTTCCAATGCGTCTT TGAG CAAA CTCA TTTTTTCTGTCTTTG TERM 1700 1562597 - 1562587 - G 72 -6.8 -4.2828 | TTGTATCCACTAAAA GCTG TCC CAGC AAAGCCGGATGGCTT TERM 1701 1563005 - 1562975 - G 100 -19.2 -3.57462 | opp_overlap 1562984, overlap 1562984 CACTTTAGCTTGAAA GGCAAGAAAGGCTG TAT CAGCCTTTCTTACC ATGAATAATCGCCAA TERM 1702 1562996 - 1562984 - G 82 -9.1 -4.29326 | opp_overlap 1562984, overlap 1562975 TTGAAAGGCAAGAAA GGCTG TAT CAGCC TTTCTTACCATGAAT TERM 1703 1562984 - 1562996 + g 82 -9.1 -4.18488 | opp_overlap 1562975 1562984 TTGAAAGGCAAGAAA GGCTG TAT CAGCC TTTCTTACCATGAAT icmD 1563493 - 1563077 - | hypothetical protein icmC 1564096 - 1563587 - | hypothetical protein icmG 1564901 - 1564167 - | hypothetical protein TERM 1704 1564864 - 1564879 + g 74 -5.4 -4.67635 | overlap 1564865 TTAGGATATTGGTAT TCATCG TCGC CGATGG TTTTCTGATTTTCGA icmE 1568038 - 1564919 - | IcmE TERM 1705 1566100 - 1566113 + g 74 -5.9 -4.7078 | overlap 1566081 1566102 CTTTGAGTTGCGCGG CGCTG AAAC CGGCG TTTTTCAGTGCTTCA TERM 1706 1566401 - 1566439 + g 86 -3.1 -5.54338 | gap 2, overlap 1566391 1566399 TTTAAGCTCGGCTGC GGT-G-AAGCCGGCTGCTT TTA AAGCAGCCAGCCCACAACC TTTTTCTTTTAATTC TERM 1707 1566478 - 1566493 + g 75 -9 -3.57462 | AAATACCCGCCATTC GCGCTT TTTT AAGCGC TTTGACGCTGCAATC TERM 1708 1566534 - 1566518 - G 70 -9.3 -3.23447 | overlap 1566516 GCAATCGCCAGAAGA CGGCGGG AAT CCCGCTG CGCTCAAAGCCTGAT TERM 1709 1566729 - 1566708 - G 75 -5.1 -4.82901 | gap 1, opp_overlap 1566728, overlap 1566709 1566723 TGCGCCGCAGAAAAA CCGGCCGCTT TTA AATCGGC-GG CGCTGAATCCGGCCC TERM 1710 1566786 - 1566805 + g 74 -7.8 -4.07568 | gap 1, opp_overlap 1566797 1566798, overlap 1566784 GCGTCTTTAAGTTCG GCGG-CGGT AAA GCCGGCCGC TTTTAAAGCCGCCAA TERM 1711 1566973 - 1567008 + g 76 -5.4 -4.80396 | overlap 1566974 CCGCATTGCTAAATC CCGCTTGTTTTAATGC CACT GCACTAAAGCCAGCGC TTTTTAAATCTTTTG TERM 1712 1566974 - 1567007 + g 73 -8.9 -3.46611 | overlap 1566973 CGCATTGCTAAATCC CGCTTGTTTTAATGC CACT GCACTAAAGCCAGCG CTTTTTAAATCTTTT TERM 1713 1567972 - 1567950 - G 100 -12.6 -3.73953 | opp_overlap 1567949 1567948 ACCACCGCGATTAAA GCCACAGCGG CAA CCGCGGCGGC AATTACTCGGAATTT icmK 1569080 - 1568025 - | IcmK TERM 1714 1568166 - 1568156 - G 74 -6.8 -4.40358 | ATCCAGGCGATAAAA CCGT TAA ACGG GTCCGTAAAAAAATG TERM 1715 1568244 - 1568256 + g 78 -10.5 -3.59627 | overlap 1568255 GGGTTTGCTGTTACT CGGCG GAA CGCCG TTTAAAACGTTTAAT icmL.1 1569747 - 1569091 - | IcmL TERM 1716 1569688 - 1569666 - G 78 -5.6 -4.90079 | opp_overlap 1569669 1569672, overlap 1569672 ATGCGAACAATAAAA CAATAATCGC TCG GCGATAATTA TCGCGATAAAACGCA TERM 1717 1569682 - 1569672 - G 74 -6.8 -4.33214 | opp_overlap 1569672 1569669, overlap 1569666 ACAATAAAACAATAA TCGC TCG GCGA TAATTATCGCGATAA icmL.2 1570372 - 1569749 - | IcmL icmN 1571017 - 1570379 - | ompA family protein TERM 1718 1570737 - 1570722 - G 70 -5.4 -4.32678 | overlap 1570735 GGTTTAAACAAACAA TCGCTC AGTA GAACGA AACGCATTGTTTCGC icmO 1573405 - 1571027 - | IcmO TERM 1719 1571903 - 1571886 - G 72 -5.5 -4.56367 | opp_overlap 1571886 GATTTCATAAAGAAA TCCCACG TTTC CGTTGGA TCTTCAAGTTTCATA TERM 1720 1573281 - 1573298 + g 72 -3.3 -5.02074 | opp_overlap 1573282 1573283, overlap 1573282 1573283 AATAACAAAAGAAAA GTCGCGA TGCC TCGCGGA TTTTTTAGAAAATCG TERM 1721 1573320 - 1573336 + g 72 -10.1 -2.87132 | AGAAAATCGGCCATG CGCACGC TCA GTGTGCG TGTGTCGCGCAGCAC TERM 1722 1573353 - 1573372 + g 76 -2.8 -5.18726 | overlap 1573355 GTGTCGCGCAGCACG TGCGAATG GAAG CGTTCGTG TTTTTCTTCTAAGCC icmP 1574544 - 1573381 - | IcmP icmQ 1575261 - 1574545 - | hypothetical protein CBU_1634a 1575407 - 1575258 - | hypothetical protein TERM 1723 1575632 - 1575616 - g 85 -11.5 -3.55444 | CCTGGACGCTCGAAA GCCGCCA TCC CGGCGGC TTACGGTCCGCACAA CBU_1635 1575523 - 1575696 + | hypothetical protein CBU_1636 1577210 - 1576035 - | hypothetical protein TERM 1724 1576248 - 1576262 + g 73 -5 -4.67697 | CTGATCCATATTCCA TCTGCT AGG AGTAGA TTTCTTCTTTTCAGA TERM 1725 1577311 - 1577299 - R 70 -7.7 -3.77302 | overlap 1577295 CCACTAGAAAATTAA TAGGC AAA GCCTA GAAATAGCAATGGAA CBU_1638 1578500 - 1577295 - | ATPase TERM 1726 1577394 - 1577404 + g 74 -2.4 -5.26119 | overlap 1577387 ATCCAGATGGGCAAT CTGC TTG GCCG TTTTATTTTTGCCGC TERM 1727 1577914 - 1577894 - G 76 -6.1 -4.56597 | overlap 1577899 1577901 GCGGCTCTTCAAAAA CGAAAGGGT AAT ACCCTCTAG CAAGGTATTTCTTAA TERM 1728 1577909 - 1577899 - G 74 -6.8 -4.32046 | overlap 1577894 1577901 TCTTCAAAAACGAAA GGGT AAT ACCC TCTAGCAAGGTATTT CBU_1639 1579808 - 1578612 - | hypothetical protein TERM 1729 1579968 - 1580025 + r 75 -10.2 -3.21354 | gap 3, opp_overlap 1579973 CAGTAGCCCGTATGA GCGAAGCGAAATACGGGAAAACAAT-GAT GTC GTCTATCGTC--CCCGTATTTCGCTTCGC TTCATACGTATATGG CBU_1639c 1581400 - 1580306 - | transposase TERM 1730 1580343 - 1580363 + g 71 -2.4 -5.10461 | opp_overlap 1580344, overlap 1580344 TCTTGGCGTGTTAAA AGCGCCCA AATGA TCGGCGCA TTTTTATTCGCTAAC TERM 1731 1580405 - 1580419 + g 74 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT icmT 1581517 - 1581774 + | IcmT icmS 1581774 - 1582112 + | IcmS dotD 1582269 - 1582778 + | DotD TERM 1732 1582999 - 1582968 - g 75 -9.4 -3.54919 | gap 1, opp_overlap 1582978 1582980 1582983 AAGCATTGCGTGAAA CAGC-CACCATGCTC GGC GCGCGTGGTGCGCTG GCTTTGCGCGCTGTC TERM 1733 1582978 - 1583001 + G 71 -8.8 -3.56643 | gap 1, opp_overlap 1582968, overlap 1582980 1582983 TGAAACAGCCACCAT GCTCGGCGCGC GTG GTGCGCTG-GC TTTGCGCGCTGTCCA TERM 1734 1583208 - 1583229 + G 93 -13.7 -3.14522 | overlap 1583197 ATGCGCGGTTTGTCA CTGCGCCGC CGAC GTGGCGCAG TTACCTGTGGCTTAG dotC 1582781 - 1583605 + | DotC dotB 1583643 - 1584761 + | Dot/Icm secretion system ATPase DotB TERM 1735 1585049 - 1585065 + G 76 -2.9 -5.252 | TATTTGTGTTTTAGT GGGGC TAAAGAT GCCTC TTTTTTCTGAAGCTC TERM 1736 1585283 - 1585303 + G 83 -7.6 -4.86033 | CGTAAATGCGTTACC GCGAACAG CGACT CTGTTTGC TTTTTCTGGGACTTT TERM 1737 1585410 - 1585438 + G 73 -6.1 -4.36914 | AGCGGTATTTTTTTC TTTTTATTGGTGA TTC TCACCACTAACAA TTTTATAAAACGCAA CBU_1646 1584768 - 1586102 + | putative transporter TERM 1738 1586104 - 1586093 - T 91 -2.2 -6.15828 | TTTATTAAAAAAAAA CACC CACT AGTG CCTTGTCAATATTCA TERM 1739 1586205 - 1586252 + T 72 -9.5 -3.09516 | gap 2, opp_overlap 1586205 GCCCGTATGAGCGAA GCGAAATACGGGGACGATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGGGC CBU_1647 1586519 - 1586424 - | hypothetical protein dotaA 1589018 - 1586574 - | DotA protein TERM 1740 1588640 - 1588630 - G 76 -8.2 -4.21772 | TGCAACAAAGAATAA CCGG TCG CCGG GTTAGGCACTAACAA TERM 1741 1588959 - 1588933 - G 81 -9.4 -4.11216 | GTGTTATCGGTAAAA TCCGTGGGCAAA TTA TCCGCCCACGCA GCCGCAGAAATTAAA icmV 1589509 - 1589015 - | hypothetical protein TERM 1742 1589612 - 1589592 - H 76 -3.4 -5.27335 | gap 1, overlap 1589593 TTTCTTAAATAAAAA TTAAAAGCG GTAG CGCTTT-AA CGGAACCTTAATATT icmW 1589699 - 1590148 + | IcmW CBU_1651 1590145 - 1590603 + | hypothetical membrane associated protein icmX 1590619 - 1591749 + | IcmX TERM 1743 1591779 - 1591758 - f 77 -5.3 -4.93454 | gap 1, opp_overlap 1591759, overlap 1591753 1591759 GAAATAAAGAGAAAA GTAAAAAACC CGA GGTTTTTT-C TTTTAAGTTGACCGA CBU_1653a 1592465 - 1592647 + | virulence-associated protein C rfaE 1594162 - 1592672 - | HldE bifunctional protein TERM 1744 1593096 - 1593115 + g 82 -7.2 -4.62336 | gap 1, overlap 1593098 1593100 TGAGCGCGGGCATCT GCTACTGCT AAT AGCAGT-GC TTTTTCAGATAAAAT TERM 1745 1593142 - 1593130 - G 82 -7.7 -4.52589 | CTTTTTCAGATAAAA TCCCA TGA TGGGA AGCGGTTATTTGGTG CBU_1656 1594271 - 1594170 - | hypothetical protein CBU_1657 1595202 - 1594438 - | alpha-L-glycero-D-manno-heptose beta-1,4-glucosyltransferase TERM 1746 1594736 - 1594756 + g 72 -6.9 -4.25104 | AAATAACCCATGGGC TTGTTGCTG TGA CAGCGATAA TTTTCGTGGACGACA CBU_1658 1596328 - 1595243 - | hypothetical protein TERM 1747 1596931 - 1596943 + G 71 -7.7 -3.75153 | CCGATCTTTAACGCC GGTAG CGC CTACC TTTAAGTTGAGAACC CBU_1659 1596377 - 1597687 + | O-antigen ligase TERM 1748 1597713 - 1597692 - g 70 -7.3 -3.96892 | overlap 1597709 AAGCGGCATGAGAAA GCCGCTAAT CAAT ATTATCGGC GCAGGCCGCCTCGGA TERM 1749 1598485 - 1598467 - g 70 -7.4 -3.91421 | opp_overlap 1598479, overlap 1598465 GAACTATACAAAACA CTCGCGTT TTC AACGCTAG AAATAGCGGCTTTGC CBU_1660 1597684 - 1598568 + | hypothetical cytosolic protein rfaF 1599584 - 1598553 - | lipopolysaccharide heptosyltransferase II TERM 1750 1598683 - 1598693 + g 77 -4.6 -5.08824 | GGTAAATCCAATTTT GCTG TCT CGGC TTTTTTGGATAAAGG CBU_1662 1599794 - 1599588 - | hypothetical protein TERM 1751 1599740 - 1599728 - G 77 -9.1 -3.83998 | opp_overlap 1599728 GCATCGGACAGGAAA GCGGA AGA TCCGC TTCTGTCACTTCGTA TERM 1752 1599728 - 1599740 + g 73 -9.1 -3.55814 | opp_overlap 1599728 GCATCGGACAGGAAA GCGGA AGA TCCGC TTCTGTCACTTCGTA CBU_1663 1599986 - 1599855 - | hypothetical protein CBU_1664 1600057 - 1600650 + | CBS domain-containing protein CBU_1665 1602386 - 1600647 - | hypothetical protein TERM 1753 1603708 - 1603744 + r 83 -11.8 -3.14132 | opp_overlap 1603720, overlap 1603720 CTAAACTATCCAGCA TCGCATTATAAACATG CACAT CATGTTTAGAGTGCGA TTCGTCGCGCGCAGC TERM 1754 1604291 - 1604337 + r 91 -13.4 -3.09516 | gap 1, opp_overlap 1604277 1604291, overlap 1604297 GCCCGTATGAGCGAA GCGAAATACGGGGACAATAAA CGACAT TTTGTT-TTCCCGTATTTCGC TTCGCTCATACGGGC rpoS 1605460 - 1604402 - | RNA polymerase sigma factor CBU_1670 1606232 - 1605540 - | putative lipoprotein NlpD TERM 1755 1605905 - 1605872 - G 71 -10.2 -2.80096 | overlap 1605865 AATAATACCCAATGA GGCGCCCTTTGGCA GGCCAT CGCCAATGGGCGAC GGGCTGCAGCGGCGG surE 1607010 - 1606234 - | 5'/3'-nucleotidase SurE TERM 1756 1606670 - 1606648 - G 74 -5.4 -4.66833 | overlap 1606649 TGGCAATCCCAAAAA CCGCCCCTCC ATC GCAGCGGCGA CCGTGCCGGAATACC ftsB 1607348 - 1607079 - | cell division protein ftsB eno 1608641 - 1607355 - | phosphopyruvate hydratase TERM 1757 1608129 - 1608114 - G 80 -10.4 -3.737 | CAATGCTTCAGCAAA GGTCGG CGCA CCGACC GGGACAATCATAAAT kdsA 1609640 - 1608798 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1758 1609380 - 1609390 + g 100 -5.4 -5.63857 | overlap 1609376 GTCGGTTATTATCGG CACT TCG AGTG TTTTTTTAACTTTTT CBU_1675a 1609679 - 1609834 + | hypothetical cytosolic protein CBU_1676 1611038 - 1609953 - | hypothetical cytosolic protein CBU_1677 1611542 - 1611108 - | hemerythrin HHE cation binding domain protein speG 1611675 - 1612187 + | diamine N-acetyltransferase TERM 1759 1612840 - 1612819 - T 75 -10.2 -3.14693 | opp_overlap 1612817, overlap 1612817 GTTACGAGGAATATA CTACTCCC GTGTTA GGGAGTAG GGATTATTCCTACGA CBU_1681 1614069 - 1613773 - | hypothetical protein TERM 1760 1614035 - 1614018 - G 75 -4.9 -4.7416 | gap 1, overlap 1614009 GGAAAACGGCAAAAA CCGCTAAT AAC ATT-GCGG AAAATATTCTCATAA pyrG 1615777 - 1614110 - | CTP synthase TERM 1761 1614135 - 1614148 + g 76 -3.8 -5.10077 | overlap 1614137 1614138 TTTTCCTGCGAAGGG GCTG CCAAAA CAGC TTTTTTGGCCTCTTT TERM 1762 1615785 - 1615808 + r 71 -9.7 -2.80579 | opp_overlap 1615783, overlap 1615784 CGTGTCATAAGACCG CCCGTTTTT TACATT AAAAACGGG ATATTATTTTAACAA CBU_1683 1615943 - 1615812 - | hypothetical protein CBU_1684 1616113 - 1616205 + | hypothetical protein TERM 1763 1617388 - 1617367 - g 71 -4.4 -4.65669 | overlap 1617368 TAGATAAAAAAAACA GCTCCCTC GATAAG GAAGAAGC ACTCGCCGCTTTTGA CBU_1685 1616280 - 1617701 + | hypothetical protein TERM 1764 1618383 - 1618365 - g 86 -7.4 -5.07011 | opp_overlap 1618364 1618365 TACATAAAGGAAAAA CGACAACT AAC AGATGTCG ATTTAATTAATTCTA CBU_1686 1617723 - 1620044 + | hypothetical protein TERM 1765 1620060 - 1620093 + T 73 -10.3 -2.79327 | opp_overlap 1620054 1620063, overlap 1620059 1620063 TAAATTAAATCTCAA CAAGTGCGAAAGGGC AAAA GCCTTTTCGCACTCA ATTTAGGTAAACTAA TERM 1766 1620090 - 1620063 - T 100 -14.2 -3.71321 | opp_overlap 1620060 1620059 1620063, overlap 1620054 ATTAAATCTCAACAA GTGCGAAAGGGC AAAA GCCTTTTCGCAC TCAATTTAGGTAAAC TERM 1767 1620063 - 1620090 + T 100 -16.4 -2.66272 | opp_overlap 1620063 1620054, overlap 1620060 1620059 ATTAAATCTCAACAA GTGCGAAAGGGC AAAA GCCTTTTCGCAC TCAATTTAGGTAAAC TERM 1768 1621484 - 1621495 + T 70 -5.8 -4.41206 | ACCCACCCACGACTG CGCT CCTA AGCG TTTTATCACATCGTT TERM 1769 1621529 - 1621543 + T 72 -8.6 -3.55622 | ACATTTTATTTTCCC TACCTC AGC GAGGTA TTTAACGGCGTTAGA TERM 1770 1621838 - 1621860 + T 82 -8.6 -4.30719 | opp_overlap 1621838 1621840, overlap 1621840 AGATCGTGCGAAAAA TAGAACAATA ACT TATTGTTCTG TTTATTGTACCAGAA TERM 1771 1621860 - 1621838 - T 77 -6.4 -4.57837 | opp_overlap 1621838 1621840, overlap 1621840 AGATCGTGCGAAAAA TAGAACAATA ACT TATTGTTCTG TTTATTGTACCAGAA TERM 1772 1621840 - 1621858 + T 76 -9 -3.75817 | opp_overlap 1621838 1621840, overlap 1621838 ATCGTGCGAAAAATA GAACAATA ACT TATTGTTC TGTTTATTGTACCAG TERM 1773 1621858 - 1621840 - T 79 -9 -3.90316 | opp_overlap 1621840 1621838, overlap 1621838 ATCGTGCGAAAAATA GAACAATA ACT TATTGTTC TGTTTATTGTACCAG TERM 1774 1622340 - 1622330 - T 71 -6.8 -4.0641 | TTTGACTGACATAAA GGCA CGC TGCC TGAACGAGAAAATCC TERM 1775 1622401 - 1622391 - T 74 -4 -5.1244 | opp_overlap 1622391 TTAGTAATAGAAAAA GAAA ATT TTTC ATTTAGAACCCCCAG dcd 1623123 - 1622557 - | deoxycytidine triphosphate deaminase apbC 1624043 - 1623123 - | NifH/FrxC domain protein TERM 1776 1623517 - 1623533 + g 83 -6.5 -5.09225 | overlap 1623531 GTAGTGACGATCACC GCCCC CGCAATA GGGGC TTTTTTCGCTAACGT TERM 1777 1623745 - 1623759 + g 84 -7.1 -4.96848 | GGCACAAATTTCTTT GCCTG CATTT CAGGC TTTTTCTGTACCCCA TERM 1778 1624147 - 1624125 - H 82 -11.4 -3.16683 | opp_overlap 1624130 1624131, overlap 1624131 ATGTTAGGGGACTAA GAAAAACACC GAT GGTGCTTTTC TCAGCATTTTAGCCC TERM 1779 1624141 - 1624131 - H 85 -6.8 -5.1356 | opp_overlap 1624130 1624131, overlap 1624125 GGGGACTAAGAAAAA CACC GAT GGTG CTTTTCTCAGCATTT CBU_1690 1624269 - 1624370 + | hypothetical protein CBU_1691 1624803 - 1624477 - | DNA-binding protein TERM 1780 1624570 - 1624584 + g 72 -7.1 -4.08216 | opp_overlap 1624570, overlap 1624567 TAACGTTTTTAAGGA GGGAG AGTGC CTCCC TTTTCCGCCCGCTGC CBU_1692 1624966 - 1624796 - | phage derived Gp49-like protein CBU_1692a 1625039 - 1625164 + | hypothetical protein TERM 1781 1625389 - 1625407 + F 72 -4.6 -4.74504 | overlap 1625392 GCCAACAGTGTACTC GATTATTC CGG GAATATTC TTTTTAAATTCACAT TERM 1782 1625649 - 1625633 - f 70 -7.9 -3.724 | AACGGATGAATAGAA GCATCGC TAA GCGAAGC CGGGTGTAGATGGTA TERM 1783 1627101 - 1627084 - f 85 -5.5 -5.18357 | TAACGTATTAAAAAA CAGAGCC TTCA GACCCTG CCAAAATGATGAAAA TERM 1784 1627358 - 1627343 - g 73 -4.6 -4.86001 | overlap 1627346 1627348 ATCACCGCACAAAAA CAAGGG CTTC CCCCCG AAGCGCTGGTGGCTA TERM 1785 1627822 - 1627802 - g 82 -9.1 -4.1673 | opp_overlap 1627801 CAAGTCGCTAATAAA CTCAAAGAA TGG TTCTCTGAG GATTTAAAGCCGTGG TERM 1786 1628039 - 1628054 + G 74 -4 -5.00616 | GTCGGAAAAGATATC GTGTAT TTCC ATGCAC TTTTTTGGCCGGCAA TERM 1787 1628324 - 1628341 + G 78 -8.4 -4.15222 | AAATACGTCAATCTC GCCAGC CGGTGC GCTGGC TTTATTACGAAAAAT TERM 1788 1628534 - 1628524 - g 71 -2.4 -5.09895 | opp_overlap 1628524 TATCGATGCAAAAAA GCCC TGG GCGC TTGCTAAAGAAATTA metG 1627148 - 1628788 + | methionyl-tRNA synthetase TERM 1789 1629277 - 1629261 - g 100 -3.7 -5.86061 | CGTTATGAAAAAAAA CAGAAAA GAC TTTCCCG CCATAAAGCCGAGCA rnfB 1628781 - 1629422 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein nth 1629409 - 1630065 + | endonuclease III CBU_1698 1631299 - 1630040 - | hypothetical ATPase TERM 1790 1631283 - 1631241 - G 100 -16.6 -4.42386 | opp_overlap 1631241 CGGTGATGCATAAAA GTACCTGTAATTTTGCTATG ATT CATATCAATATTACAGGTAC TTTTGGGGCCCTTCA TERM 1791 1631241 - 1631283 + g 100 -16.6 -4.09739 | opp_overlap 1631241 CGGTGATGCATAAAA GTACCTGTAATTTTGCTATG ATT CATATCAATATTACAGGTAC TTTTGGGGCCCTTCA CBU_1699 1632859 - 1631303 - | hypothetical protein TERM 1792 1634005 - 1633991 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 1793 1634067 - 1634047 - g 71 -2.4 -5.10461 | opp_overlap 1634048, overlap 1634048 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1699a 1633010 - 1634104 + | transposase CBU_1699b 1634397 - 1634101 - | hypothetical protein TERM 1794 1634632 - 1634614 - g 73 -5.2 -4.73108 | GGGAGAAAATTAAAA TGCCTCAC GAG GTATGGCA AATCATAACTGATTA TERM 1795 1635703 - 1635714 + G 77 -4.4 -5.16841 | overlap 1635691 1635693 GAACGGCAGCGCGAT TAGC TGCT GCTA TTTTTATTGGTCTGA CBU_1701 1634514 - 1635920 + | hypothetical membrane spanning protein CBU_1702 1636129 - 1635995 - | hypothetical cytosolic protein TERM 1796 1636661 - 1636671 + G 77 -4.6 -5.06414 | AGTCGATATTTTTGA CCGT GAA GCGG TTTTTATTGAACGCG pyrC 1636209 - 1637264 + | dihydroorotase rnt 1637251 - 1637925 + | ribonuclease T CBU_1705 1638311 - 1637922 - | hypothetical protein TERM 1797 1638344 - 1638322 - R 100 -11.3 -5.52347 | opp_overlap 1638322 1638341 AACAAAATTAAAAAA CGGCGACAG TATTT CTATCGCCG TTTCTGCTTTTATTT TERM 1798 1638322 - 1638344 + r 85 -9.1 -4.27846 | opp_overlap 1638322, overlap 1638341 AACAAAATTAAAAAA CGGCGACAG TATTT CTATCGCCG TTTCTGCTTTTATTT CBU_1706 1638971 - 1638369 - | anti-oxidant AhpCTSA family protein CBU_1707 1639101 - 1639009 - | hypothetical protein TERM 1799 1639185 - 1639175 - H 93 -6.8 -5.4387 | AGATAAATGAAAAAA GGAG GAA CTCC TAATGGCTTTTGAAT sodB 1639188 - 1639769 + | superoxide dismutase dapB 1639771 - 1640490 + | dihydrodipicolinate reductase CBU_1710 1640493 - 1640930 + | hypothetical protein CBU_1711 1641089 - 1641277 + | hypothetical protein CBU_1712 1641294 - 1641584 + | GIY-YIG catalytic domain protein CBU_1713 1643156 - 1641681 - | glycine dehydrogenase subunit 2 TERM 1800 1642869 - 1642849 - G 74 -3.2 -5.08169 | gap 1, overlap 1642850 1642851 AGACATTGTAAAAAA GCCTGGCTC TGAG GAGCC-GGA GATAAAGGATGACGT CBU_1714 1644564 - 1643224 - | glycine dehydrogenase subunit 1 gcvH 1644959 - 1644567 - | glycine cleavage system H protein gcvT 1646145 - 1644970 - | aminomethyltransferase TERM 1801 1645997 - 1646022 + gH 76 -9.1 -3.69332 | gap 1, opp_overlap 1646003 1646004 GGCATTTCCCACCCC GCGAAA-TCCAC AAA GTGGGCTTTCGC TTTAGCGTGTTCTTC TERM 1802 1647131 - 1647117 - gR 75 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 1803 1647193 - 1647173 - gR 71 -2.4 -5.10461 | opp_overlap 1647174, overlap 1647174 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1716a 1646136 - 1647230 + | transposase CBU_1716b 1647538 - 1647227 - | hypothetical protein TERM 1804 1647569 - 1647605 + r 100 -13.2 -3.91897 | gap 1, opp_overlap 1647580, overlap 1647571 1647580 CTTCGCTGCATACGG GCTACAAAAAACCCCGC ATAG GCGGGGTTTTTTTT-GC TTTCTGAGTGCAAGG TERM 1805 1647571 - 1647604 + r 91 -13.3 -2.94924 | opp_overlap 1647580, overlap 1647569 1647580 TCGCTGCATACGGGC TACAAAAAACCCCGC ATAG GCGGGGTTTTTTTTG CTTTCTGAGTGCAAG TERM 1806 1647595 - 1647580 - R 100 -11.8 -5.24531 | opp_overlap 1647571 1647569 1647580 ACGGGCTACAAAAAA CCCCGC ATAG GCGGGG TTTTTTTTGCTTTCT TERM 1807 1647580 - 1647595 + r 100 -11.8 -6.0458 | opp_overlap 1647580, overlap 1647571 1647569 ACGGGCTACAAAAAA CCCCGC ATAG GCGGGG TTTTTTTTGCTTTCT groEL 1649280 - 1647622 - | chaperonin GroL TERM 1808 1648071 - 1648101 + g 83 -2.5 -5.5762 | gap 1, overlap 1648074 CTTCGACGGCTGCGC GCGTCGCATGTAAG GCAT CTTCCACGCGG-GC TTTTTTCTCTTTCAT TERM 1809 1648904 - 1648914 + g 72 -8.2 -3.91897 | AATTCAGCTACCGCT GCCG TTA CGGC TTTATCAATACCCCG TERM 1810 1649195 - 1649166 - G 82 -9.3 -4.20084 | opp_overlap 1649166 1649169, overlap 1649167 ATGATTTATCTAAAA CGACATTGCGACC TTTT GGTCCCAACGTCA CTTTTACCGCGTTGG TERM 1811 1649194 - 1649167 - G 76 -10.6 -3.11569 | opp_overlap 1649166 1649169, overlap 1649166 TGATTTATCTAAAAC GACATTGCGACC TTTT GGTCCCAACGTC ACTTTTACCGCGTTG groES 1649658 - 1649308 - | 10 kDa chaperonin GroS TERM 1812 1651441 - 1651453 + G 75 -9.1 -3.69437 | opp_overlap 1651429, overlap 1651435 AATTGGTTAGCATCA CCACC GCT GGTGG TTGCTTTTGCCCTTG TERM 1813 1651629 - 1651612 - g 71 -8.5 -3.54129 | overlap 1651615 GATATGTTCCGCAAA GAATACG CCGA CGTATTC GAGGGAGACGAAGAA TERM 1814 1652255 - 1652241 - g 89 -8.6 -4.74103 | opp_overlap 1652241 GTTGGAATTCAAAAA TGACGA TAA TCGTCA TTCTTTAAAATTAGA TERM 1815 1652241 - 1652255 + G 76 -8.6 -3.96618 | opp_overlap 1652241 GTTGGAATTCAAAAA TGACGA TAA TCGTCA TTCTTTAAAATTAGA acnA 1649719 - 1652472 + | aconitate hydratase CBU_1721 1652483 - 1653193 + | hypothetical protein TERM 1816 1653218 - 1653208 - f 75 -2.6 -5.19275 | overlap 1653203 1653209 ATTTAGAAAATAAAA TTTA TTT TAAA TAATCATCCAATTTC TERM 1817 1654678 - 1654666 - f 72 -3.3 -5.00884 | opp_overlap 1654666 1654671 ATTCTTCTGAAAAAA CCAGC GCG GATGG TTTAGCCGCTTGAAT TERM 1818 1655160 - 1655104 - g 95 -10.8 -4.60889 | gap 1, overlap 1655094 1655092 1655114 1655115 AATGAGCTTGAAAAA GCCCCCAAAAGGCACGTCATTCTGGCA TGGT TGCCGGAATGACGTG-CGAAAGAGGGC ACCAGTTGTTCACTT TERM 1819 1655151 - 1655114 - g 100 -17.1 -4.14615 | overlap 1655104 1655115 AAAAAGCCCCCAAAA GGCACGTCATTCTGGCA TGGT TGCCGGAATGACGTGCG AAAGAGGGCACCAGT TERM 1820 1655150 - 1655115 - g 100 -20.6 -3.07685 | overlap 1655114 1655104 AAAAGCCCCCAAAAG GCACGTCATTCTGGCA TGGT TGCCGGAATGACGTGC GAAAGAGGGCACCAG TERM 1821 1656213 - 1656237 + G 86 -9.9 -4.44046 | ATATCAGTCATACGG GCAACGCGTCC TTA GGAGGCGTCGC TTTGTTTACGATGGG dsbD 1655090 - 1656982 + | thiol:disulfide interchange protein CBU_1724 1659234 - 1656991 - | hypothetical protein TERM 1822 1657955 - 1657966 + g 70 -5.8 -4.38712 | AGTATTTTAAAAGCT TCCC ACAG GGGA TTTTCTCCGGCTGAA TERM 1823 1658270 - 1658252 - G 83 -6 -5.0538 | overlap 1658253 GTTGACTTCAAAAAA CCCAATTC GCC GAATTGGC AATTCACATCGGCAC TERM 1824 1658269 - 1658253 - G 77 -9.5 -3.62746 | overlap 1658252 TTGACTTCAAAAAAC CCAATTC GCC GAATTGG CAATTCACATCGGCA TERM 1825 1659640 - 1659609 - R 93 -10.8 -4.71222 | overlap 1659610 1659611 AGACTAAAACTAAAA CCCGTCATTCCCGC GCAG GCGGGGACGACGAA AGGGGTGCGATTGAA TERM 1826 1659639 - 1659610 - R 86 -12.1 -3.41107 | overlap 1659609 1659611 GACTAAAACTAAAAC CCGTCATTCCCGC GCAG GCGGGGACGACGA AAGGGGTGCGATTGA TERM 1827 1659638 - 1659611 - R 90 -13.4 -2.63579 | overlap 1659610 1659609 ACTAAAACTAAAACC CGTCATTCCCGC GCAG GCGGGGACGACG AAAGGGGTGCGATTG TERM 1828 1659663 - 1659719 + r 100 -25.5 -2.66272 | opp_overlap 1659674, overlap 1659674 CGATTGAAAGTGTAG GTTTTCAACAAGTAGCCCGTATTCCGC TTC GCTTCATACGGGCTACTTGTTGAAAAC TAACTTTCAATCGCA TERM 1829 1659674 - 1659708 + r 88 -11.4 -3.62597 | opp_overlap 1659674, overlap 1659663 GTAGGTTTTCAACAA GTAGCCCGTATTCCGC TTC GCTTCATACGGGCTAC TTGTTGAAAACTAAC TERM 1830 1659708 - 1659674 - R 88 -11.4 -3.62046 | opp_overlap 1659674 1659663 GTAGGTTTTCAACAA GTAGCCCGTATTCCGC TTC GCTTCATACGGGCTAC TTGTTGAAAACTAAC CBU_1724a 1659813 - 1659667 - | hypothetical protein accB 1659823 - 1660287 + | biotin carboxyl carrier protein of acetyl-CoA carboxylase TERM 1831 1660394 - 1660406 + G 77 -9.1 -3.78022 | opp_overlap 1660394 TAGCGGCTTATTCAA TCGCG GAT CGCGA TTTAATGCATGTGCG TERM 1832 1660523 - 1660541 + G 70 -3 -5.00616 | TTACGGATGTTGAGG CCATTCAC CCC GGGTATGG TTTTTTGGCGGAAAA TERM 1833 1661517 - 1661505 - g 73 -4.9 -4.72272 | opp_overlap 1661505 CGCGCGCATGAAAAA TTCTT TAG AAGAA CTTGTGATTGAAGGA accC 1660294 - 1661640 + | biotin carboxylase arcB 1662702 - 1661692 - | ornithine cyclodeaminase TERM 1834 1662052 - 1662067 + g 81 -3.2 -5.32699 | GTTAATAGTCATACC CGGTTG TATC CAGTCG TTTTTTAATATTTGG CBU_1728 1663312 - 1662695 - | nicotinamide mononucleotide transporter TERM 1835 1663295 - 1663273 - G 71 -4.9 -4.46617 | gap 1, opp_overlap 1663274, overlap 1663275 AAAAGAAAGCGAAAA TAGCGCCTGA TATA TCAAGCGC-A TGTAATAAGAATTTC TERM 1836 1663294 - 1663275 - G 80 -10 -3.80537 | opp_overlap 1663274, overlap 1663273 AAGAAAGCGAAAATA GCGCCTGA TATA TCAAGCGC ATGTAATAAGAATTT hemF 1664297 - 1663347 - | coproporphyrinogen III oxidase TERM 1837 1663730 - 1663714 - G 71 -2.2 -5.0917 | gap 1 TCATCAAAAAATAAA CCGC-CA ATTC CGCGCGG CTCATTTCGATGTTT CBU_1730 1665163 - 1664387 - | HAD hydrolase, family IB (PSPase-like) TERM 1838 1665881 - 1665891 + H 70 -8.2 -3.68222 | TTCACCGAGTGACGG CGCG TAT CGCG TTATTGGCATTAGGA TERM 1839 1666412 - 1666431 + H 85 -5.7 -5.28778 | overlap 1666402 1666407 TATTATGCTGCCACT CAGCGGT CTTTTA ATCGCTG TTTTTTCTGGCTGGT CBU_1732 1666586 - 1667752 + | D-3-phosphoglycerate dehydrogenase TERM 1840 1667833 - 1667843 + F 74 -4 -5.00895 | GAGGCCCAATTTTCT CTTA ATT TAAG TTTTTATCTAATAAG TERM 1841 1669478 - 1669488 + G 86 -2.4 -5.64421 | CATGGACACGGTATA TGCC ACT GGCC TTTTTTATTTAGCCT CBU_1733 1667895 - 1669796 + | hypothetical membrane spanning protein CBU_1734 1670608 - 1669895 - | DnaA-related protein CBU_1735 1671756 - 1670611 - | hypothetical protein TERM 1842 1670768 - 1670786 + g 86 -2.4 -5.65496 | opp_overlap 1670749 1670769 1670780, overlap 1670769 1670778 AACGATTTCACTAAA TCATCG AGATTAC CGATGG TTTTTATTTTTAATA TERM 1843 1671430 - 1671444 + g 70 -6.4 -4.17657 | overlap 1671432 GTCAAAAACGACTTG TAGCAG GAG CTGCTG TTTTCCGCTCTCATC TERM 1844 1672450 - 1672433 - g 70 -2.7 -4.91109 | CTCTCATTAGAAAAA TTTTAGC TCGG GCGAAAA TACCGCTTTCGCAGT purM 1671784 - 1672875 + | phosphoribosylformylglycinamidine cyclo-ligase purN 1672872 - 1673519 + | phosphoribosylglycinamide formyltransferase TERM 1845 1673725 - 1673709 - g 76 -10.1 -3.28003 | opp_overlap 1673708 GGAATACATGAGCAA CACCCTG GGT CAGGGCG ATCGTATCGAAATTC hipB 1673605 - 1673943 + | integration host factor beta-subunit CBU_1739 1674766 - 1673909 - | tetrapyrrole methylase domain-containing protein TERM 1846 1674127 - 1674146 + g 71 -2.1 -5.09225 | opp_overlap 1674129, overlap 1674120 1674129 CTCCCTTTTCCTGAA CAGGATT TTCATT AATCCAG TTTTTTAACTCCGCT TERM 1847 1674399 - 1674378 - G 74 -2.2 -5.26119 | gap 1, overlap 1674381 CCTTCAAAAATAAAA CGATCCGTC GGCAA GCCGGA-CG CCACCAAAGCGGCGA CBU_1740 1675015 - 1674848 - | hypothetical protein TERM 1848 1675225 - 1675243 + G 71 -2.3 -5.03145 | overlap 1675213 CGTTTGCCAAACAAG CTGGTGC CATTC GCAACGG TTTTTTGGCGGCTTA TERM 1849 1676025 - 1676010 - g 73 -9 -3.44848 | opp_overlap 1676009 1676010, overlap 1676008 TCCCTTCAGCAAACA CGCGAA CGCA TTCGCG CTTTATGGCCTCGTT CBU_1741 1675029 - 1676219 + | putative lipoprotein CBU_1742 1676269 - 1676631 + | hypothetical protein gmhA 1676637 - 1677236 + | phosphoheptose isomerase TERM 1850 1677516 - 1677498 - g 73 -4.4 -4.87291 | opp_overlap 1677514 TAGGTCAAGCAAAAA CGGTAGCG TTA CGCGATCG GGCTTACCAGATTAC CBU_1744 1677236 - 1677811 + | putative phospholipid-binding liporotein TERM 1851 1678239 - 1678229 - T 70 -3.2 -5.00616 | opp_overlap 1678211, overlap 1678211 CTCTTTTTTAAAAAA GGAA ATT TCCC GGCAGCCCAAAAATT CBU_1745 1678913 - 1678221 - | peptidase, M50 family protein TERM 1852 1678389 - 1678375 - G 71 -8.5 -3.42503 | TTTGAATACGCATAA GCCGC TTTTG GCGGC AAAATCGCTGAGACT sspB 1679405 - 1679001 - | stringent starvation protein B sspA 1680069 - 1679407 - | stringent starvation protein A rpsI 1680519 - 1680100 - | SSU ribosomal protein S9P rplM 1680966 - 1680538 - | 50S ribosomal protein L13 TERM 1853 1681061 - 1681044 - H 70 -7.7 -3.63895 | overlap 1681045 TGCAAGCACCCCAAA CGCCTTC GCCC GAAGGCA GGAATCGCGTGCGAA TERM 1854 1681273 - 1681254 - g 80 -5.6 -5.06414 | gap 1, overlap 1681255 1681256 CCGGCGCAAGAAAAA CGG-CAGCG CGG CGCAGGCCG ACTGCAAAAAGAAAA CBU_1749a 1681101 - 1681367 + | hypothetical protein TERM 1855 1681681 - 1681699 + F 86 -10.4 -4.07107 | TACTACGAGGGCGGA GCTTAAGA TTA TCTTAAGC TTTATGCTGTATTAT CBU_1751 1681753 - 1683015 + | hypothetical protein CBU_1752 1683051 - 1684289 + | hypothetical protein CBU_1753 1684363 - 1684779 + | hypothetical cytosolic protein CBU_1754 1685397 - 1684801 - | hypothetical protein CBU_1755 1685532 - 1685407 - | hypothetical protein TERM 1856 1686052 - 1686063 + G 84 -4.4 -5.35224 | ACAGCATTATTTTGA TTGG CGTG CCAA TTTTGTTTTTATGAC CBU_1756 1685579 - 1686760 + | Bcr/CflA subfamily drug resistance transporter TERM 1857 1687685 - 1687695 + F 87 -3.2 -5.81412 | AATATAAATTTGGCA CAGG CAG TCTG TTTTTTTTCAATAGC TERM 1858 1690415 - 1690401 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 1859 1690477 - 1690457 - g 71 -2.4 -5.10461 | opp_overlap 1690458, overlap 1690458 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1758a 1689450 - 1690514 + | transposase CBU_1758b 1690855 - 1690511 - | hypothetical protein TERM 1860 1690908 - 1690886 - H 70 -9.2 -3.17212 | opp_overlap 1690892, overlap 1690892 TTATTAGGGCATTAA GAAAAACACC GAT GGCGCTTTTC TCAGCATTTTAGGCG TERM 1861 1690902 - 1690892 - H 76 -4.6 -5.1356 | opp_overlap 1690892, overlap 1690886 GGGCATTAAGAAAAA CACC GAT GGCG CTTTTCTCAGCATTT CBU_1760 1690932 - 1691045 + | hypothetical cytosolic protein CBU_1761 1693082 - 1691109 - | two component system histidine kinase TERM 1862 1691305 - 1691315 + g 83 -5.4 -5.23316 | GCTTTGCGATCATTG GCTT CGA AAGC TTTTTTAATATCCTC TERM 1863 1691420 - 1691436 + g 74 -5.9 -4.59882 | TCGCCGAAGTCCAAT CAATGAC CTT GTTATTG TTATTTCTTTTTTCA TERM 1864 1691919 - 1691909 - G 70 -6.8 -4.09864 | opp_overlap 1691909 ATTCAGGTTCTAAAA GCTC CTC GAGC TTCGTTAAAGCAGCG TERM 1865 1692958 - 1692970 + g 78 -6.3 -4.63218 | opp_overlap 1692958 1692957 TCCTTATAACCAAAT TGTTC AGC GAACA TTTTATTGCAGCCGC CBU_1762 1694518 - 1693136 - | FAD dependent oxidoreductase TERM 1866 1694584 - 1694598 + H 70 -2.8 -5.00884 | AACTGTTTCAATATT GTAGCA TTT TGTTGC TTTTTTAACCAAAAT CBU_1763 1694676 - 1696010 + | hypothetical ATPase CBU_1764 1696141 - 1696034 - | hypothetical protein TERM 1867 1696078 - 1696066 - Gf 81 -3.3 -5.34555 | opp_overlap 1696066 CTACAGGACAAAAAA CGAGC GAG GCTAG TTGCATTTTTGTTAG CBU_1764a 1696140 - 1696496 + | hypothetical protein TERM 1868 1696519 - 1696566 + Tr 100 -19.4 -3.09516 | opp_overlap 1696519 1696525, overlap 1696525 1696533 1696536 GCCCGTATGAGCGAA GCGAAATACGGGGACGATGATG ACAT CATTGTTTTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 1869 1696566 - 1696519 - TR 84 -12.8 -3.09516 | opp_overlap 1696519 1696525 1696533 1696536, overlap 1696525 GCCCGTATGAGCGAA GCGAAATACGGGGACGATGATG ACAT CATTGTTTTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 1870 1696525 - 1696560 + Tr 79 -9.8 -3.77219 | opp_overlap 1696519 1696525, overlap 1696519 1696533 1696536 ATGAGCGAAGCGAAA TACGGGGACGATGATG ACAT CATTGTTTTCCCCGTA TTTCGCTTCGCTCAT CBU_1765 1696840 - 1696622 - | hypothetical protein TERM 1871 1696679 - 1696710 + g 70 -2.8 -5.00138 | gap 1, overlap 1696678 1696680 GCGTTGGCATTTTGT GCCGCAGCCGGCGGG TTT TTC-CTGGCAGCGGA TTTTTCCTTTGCGTA TERM 1872 1696805 - 1696822 + g 78 -6.3 -4.73613 | TAAATTGGCGGATTG GCGTTCT TTTA AGAATGC TTTTATTGATAATAA feoB 1699290 - 1696840 - | ferrous iron transport protein B TERM 1873 1696870 - 1696891 + g 73 -4.3 -4.7923 | opp_overlap 1696870 GCGTTTTTTTAAAAA TCTCGGCCG CAAG CGCCAGAGA TTTCTTTCTTTAAAT TERM 1874 1699246 - 1699236 - G 77 -6.8 -4.47707 | GCGCATTAAAAACAA CGGT TTT ACCG CAATTGGGATTCCCG feoA 1699560 - 1699291 - | ferrous iron transport protein A TERM 1875 1699366 - 1699355 - G 77 -2.2 -5.34381 | AAACTCAAATAAAAA TCAC GCAC GCGA ATTTGCACAGGATCA CBU_1768 1700083 - 1699622 - | hypothetical protein CBU_1769 1700763 - 1700146 - | alpha/beta hydrolase TERM 1876 1700608 - 1700626 + g 79 -9.6 -3.75024 | opp_overlap 1700611, overlap 1700611 GTCCAAGGCCTTAGC TAAGGTGG TAA CCACCTTG TTATTCATCGTCCCA TERM 1877 1700611 - 1700623 + g 79 -9.1 -4.00445 | opp_overlap 1700611, overlap 1700608 CAAGGCCTTAGCTAA GGTGG TAA CCACC TTGTTATTCATCGTC CBU_1770 1702183 - 1700867 - | ABC transporter ATP-binding protein TERM 1878 1702260 - 1702239 - R 70 -5.9 -4.33739 | gap 1 TAAAAAATTTTAAAA CTCC-TCTCC CAA GGAGATAGAG CACGAATTAAAACCT CBU_1771 1704026 - 1702281 - | ABC transporter permease protein TERM 1879 1702797 - 1702779 - G 76 -3.9 -5.03747 | gap 1, overlap 1702780 1702781 AAACGCTGCAAAAAA CTGTGCAA TCGG TTGCAC-G ATGCGAGATGCATTG TERM 1880 1703286 - 1703274 - G 79 -7.7 -4.40132 | overlap 1703264 AGCAATCACAATAAA CATCG TGA CGATG ACATAAATGATGGCC TERM 1881 1704183 - 1704201 + r 93 -7.4 -5.40072 | overlap 1704184 GAAGGGATTTCAATG GTGGGGTA CTT TACCCCAG TTTTTTTGAAAAGGC TERM 1882 1704184 - 1704200 + r 86 -10.9 -3.83561 | overlap 1704183 AAGGGATTTCAATGG TGGGGTA CTT TACCCCA GTTTTTTTGAAAAGG yihA 1704878 - 1704261 - | small GTP-binding protein domain-containing protein TERM 1883 1706540 - 1706552 + r 70 -3.3 -4.87626 | opp_overlap 1706540 1706548 GAAATTAAAGACGAA GTGGA AAA TCCCC TTTTTAATATTGAGG CBU_1777 1706823 - 1706638 - | hypothetical protein fbaA 1707978 - 1706887 - | fructose-1,6-bisphosphate aldolase TERM 1884 1708121 - 1708074 - H 100 -15.1 -3.1505 | opp_overlap 1708074 1708105, overlap 1708080 1708085 AGTAGCCCGTATGAA GCGAAACGAAATACGGGAA TTGCATTATT TCCCCGTATTCCGCTTCGC TTCATACGGGCTACT TERM 1885 1708074 - 1708121 + H 75 -10 -3.1505 | gap 1, opp_overlap 1708074 1708080 1708085, overlap 1708105 AGTAGCCCGTATGAA GCGAAACGAAATACGG-GAATTG CAT TATTTCCCCGTATTCCGCTTCGC TTCATACGGGCTACT TERM 1886 1708115 - 1708080 - H 70 -7.7 -3.78329 | opp_overlap 1708074 1708105, overlap 1708074 1708085 CCGTATGAAGCGAAA CGAAATACGGGAA TTGCATTATT TCCCCGTATTCCG CTTCGCTTCATACGG TERM 1887 1708377 - 1708391 + G 85 -10 -4.15788 | ACTTCGGTTATTTTG CCTTCC TCG GGAAGG TTTCTTAGCCCCCTT TERM 1888 1708618 - 1708606 - g 77 -3.5 -5.20154 | ATATAACTGAAAAAA TAATA GCC TATTA TCGTGCTAAAACGGG CBU_1780 1708215 - 1709804 + | hypothetical protein pyk 1711262 - 1709808 - | pyruvate kinase pgk 1712463 - 1711249 - | phosphoglycerate kinase TERM 1889 1711794 - 1711780 - G 80 -7.2 -4.56597 | CTGCGCTTTTAAAAA GGTATT TGC AATACC ACCGCCTACGATTAA gap 1713539 - 1712535 - | glyceraldehyde 3-phosphate dehydrogenase tkt 1715572 - 1713554 - | transketolase TERM 1890 1713705 - 1713727 + g 74 -3.3 -5.09426 | overlap 1713706 TACCAATAATCGGGA TGAGCGGCC TCGAT GGCTACTCG TTTTTTAACGTTCGG TERM 1891 1715384 - 1715373 - G 71 -4.4 -4.73682 | overlap 1715374 TTGGATAAGACAAAA CGAT CGCG ATCG ACCCAATTAAGATTA TERM 1892 1716691 - 1716677 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 1893 1716753 - 1716733 - g 71 -2.4 -5.10461 | opp_overlap 1716734, overlap 1716734 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1785 1715696 - 1716790 + | IS1111A transposase CBU_1785a 1717059 - 1716787 - | hypothetical protein TERM 1894 1717071 - 1717120 + r 100 -15.3 -3.05816 | gap 1, opp_overlap 1717081 1717083, overlap 1717076 1717081 1717082 CCATATACGTATGAG CGAAGCGAAATA-CGGGAATTGCG CAA CGTATTTCCCGGTATTTTGTTTCG TTCCATACGGACTAC TERM 1895 1717076 - 1717115 + r 84 -10.2 -3.93288 | gap 1, opp_overlap 1717081 1717083, overlap 1717071 1717081 1717082 TACGTATGAGCGAAG CGAAATA-CGGGAATTGCG CAA CGTATTTCCCGGTATTTTG TTTCGTTCCATACGG TERM 1896 1717081 - 1717110 + r 82 -6.5 -4.99947 | gap 1, opp_overlap 1717081 1717083, overlap 1717076 1717071 1717082 ATGAGCGAAGCGAAA TA-CGGGAATTGCG CAA CGTATTTCCCGGTA TTTTGTTTCGTTCCA TERM 1897 1717082 - 1717108 + r 73 -7.2 -4.11369 | opp_overlap 1717081 1717083, overlap 1717081 1717076 1717071 TGAGCGAAGCGAAAT ACGGGAATTGCG CAA CGTATTTCCCGG TATTTTGTTTCGTTC TERM 1898 1717107 - 1717083 - R 72 -8.5 -3.46783 | opp_overlap 1717082 1717081 1717076 1717071, overlap 1717081 GAGCGAAGCGAAATA CGGGAATTGCG CAA CGTATTTCCCG GTATTTTGTTTCGTT CBU_1786 1718334 - 1717132 - | hypothetical ATPase TERM 1899 1717934 - 1717922 - G 83 -5.5 -5.21236 | AATGTATAAGAAAAA TAGCG ACC CGCCA ACGAATCCCCGACGC TERM 1900 1718972 - 1718985 + G 71 -3.8 -4.78326 | AACTTGCTTTGTTAC CCGT CACGCA ACGG TTTATTTATTTGGAA TERM 1901 1719485 - 1719472 - g 79 -3.8 -5.1925 | opp_overlap 1719484, overlap 1719463 CGACAAGCCAAAAAA GCTG GCTATG CAGC TACACTTGGCATTTG glmS 1718371 - 1720206 + | glutamine-fructose-6-phosphate transaminase (isomerizing) CBU_1788 1720203 - 1720793 + | hypothetical cytosolic protein TERM 1902 1721207 - 1721194 - T 75 -8.1 -3.97368 | GCGTTAACCGACAAA TGCCG GCTC CGGCA GCCCCCTGACACCCA CBU_1789 1722048 - 1721182 - | SMP-30/CGR1 family protein CBU_1790 1722228 - 1724132 + | hypothetical protein TERM 1903 1726073 - 1726083 + G 79 -6.8 -4.64657 | AATCATCCCGTGCTC CTGC GAT GCAG TTTTTGGAGGTTTAC CBU_1794 1725445 - 1726263 + | hypothetical protein polI 1729001 - 1726293 - | DNA polymerase I TERM 1904 1726460 - 1726470 + g 84 -4.6 -5.40072 | GCATGATCAAATGAG CCTC AAC GGGG TTTTTTTGGAGCCAA TERM 1905 1728115 - 1728146 + g 100 -13.2 -3.80858 | gap 1 GCGGCTACTTTTTTA TCTTGGTTTGCCAGA AGT TC-GGCAAGCCAAGA TTTAAATTCATATTC TERM 1906 1729152 - 1729169 + G 76 -7.7 -4.17023 | opp_overlap 1729151 1729152 1729154, overlap 1729163 1729165 ATTATACCTCAGAAT TAGCGGG TCCA TCCGCTA TTTTAGCGTGGTTAA TERM 1907 1729645 - 1729667 + G 74 -5.4 -4.62313 | overlap 1729652 GATGCACGGTGTTTT TGCAGCCGTC TCC GGCGGGGGCA TTGTTTTTGCTTTTA TERM 1908 1729737 - 1729726 - g 83 -7.2 -4.74504 | opp_overlap 1729726 1729728, overlap 1729728 AGGGGAAGCTAAAAA GCCC GCGC GGGC TTTACCGTTCGCGGT TERM 1909 1730030 - 1730044 + G 74 -10 -3.14211 | AGTCATCATATTCCA CCGTTG TTT CAACGG TTACTGCACGGCAAT CBU_1796 1729052 - 1730680 + | amino acid permease TERM 1910 1731057 - 1731045 - g 77 -9.1 -3.78904 | GATGAAATCGAACAA CGTCG CTT CGACG AAGCAAAAATGAGAA CBU_1797 1730685 - 1731125 + | thioesterase family protein CBU_1798 1731254 - 1733197 + | hypothetical protein TERM 1911 1733311 - 1733300 - gT 73 -3 -5.09225 | ATGGGAGGTAAAAAA TATG AACA CATA CATGCTTATCCAATT CBU_1799 1734040 - 1733579 - | acetyltransferase CBU_1799a 1733270 - 1733728 + | cupin superfamily protein TERM 1912 1733926 - 1733907 - GT 83 -2.8 -5.52079 | ATACCAAAACAAAAA GAATGCTC GATA AAGCGTTC TACATATTCAATTGG CBU_1800 1734795 - 1734037 - | hypothetical membrane spanning protein CBU_1801 1735100 - 1734804 - | hypothetical protein TERM 1913 1735006 - 1735018 + g 77 -6.9 -4.51812 | overlap 1735007 TCTGTCATTTGTACT TGCGC AGG GCGCG TTTCTTCTTGTCCCA CBU_1802 1735762 - 1735124 - | hypothetical protein CBU_1803 1735952 - 1736080 + | hypothetical protein TERM 1914 1736221 - 1736211 - g 77 -6.8 -4.55697 | opp_overlap 1736211 ATTCTGAGAAACAAA TCGC TAA GCGA TTAAATTTGAGTATT CBU_1804 1736099 - 1736353 + | LuxR family transcriptional regulator CBU_1805 1736367 - 1736750 + | LuxR family transcriptional regulator TERM 1915 1736761 - 1736800 + T 75 -10.1 -3.07816 | opp_overlap 1736751 1736750 1736761, overlap 1736767 1736788 AATAGCCCGTATGAA GCGGAATACGGGGATTG CGTTTT TATTTCCCGTATTTCGC TTCGCTGCATACGGG CBU_1806 1737113 - 1736826 - | DNA polymerase domain-containing protein TERM 1916 1737125 - 1737137 + r 77 -7.7 -4.28548 | GCATTTTAGCTATTG TGGGA AAC TCCCA TTTTGATACATCGGT TERM 1917 1737354 - 1737374 + r 72 -3.4 -5.05577 | CCCTCTTTTTAAAAA CAGAATTT AATTA AAATTTTG TTTTTGGTTTCATTT CBU_1808 1739448 - 1738234 - | export ABC transporter permease protein TERM 1918 1738383 - 1738363 - G 83 -11.1 -3.6284 | AAGTAGGATGCGAAA GCCCCAGCC GGT GGCTAAGGC GAGGATGGATGCTAT CBU_1809 1740103 - 1739438 - | ABC transporter ATP-binding protein macA 1741271 - 1740096 - | ABC transporter periplasmic substrate-binding protein TERM 1919 1740323 - 1740341 + g 73 -6 -4.36914 | CGCTCATGCCTACAT GGATAACG TTG CGTTGTTC TTTTGTCACGCCAGG TERM 1920 1741107 - 1741087 - G 77 -9.7 -3.63922 | overlap 1741085 ACGGGGCTTAAAACA GGTACCGTT CTC AACGGTGCC AACGAGCCTTTAAAA TERM 1921 1741233 - 1741218 - G 71 -2.4 -5.06103 | overlap 1741220 1741221 ACAACCGGTAAAAAA GACGGC TGCT GCCAGC ATTAAACAAACTCCC CBU_1811 1742797 - 1741274 - | type I secretion outer membrane protein CBU_1812 1742864 - 1743991 + | erythronate-4-phosphate dehydrogenase CBU_1813 1743972 - 1744100 + | hypothetical protein TERM 1922 1744560 - 1744576 + G 70 -6.6 -4.07868 | GCGCTTAAATTGGCT TTTCCG ATTTG CGGAAA TTTATATGCGTATAG TERM 1923 1744665 - 1744681 + G 73 -6.5 -4.44046 | opp_overlap 1744665 GACTTAACACAAAAT GGCGATT TTT GGTCGCC TTTATTTGCCGTGGG CBU_1814 1744137 - 1744850 + | outer membrane protein TERM 1924 1744933 - 1744884 - T 78 -11 -3.09516 | gap 1, opp_overlap 1744884 1744922 GCCCGTATGAGCGAA GCGAAATACGGGAA-AACAATGA TGTCG TCGTTATCGTCCCCGTATTTCGC TTCGCTCATACGGGT priA 1746986 - 1744998 - | primosomal protein N' TERM 1925 1745566 - 1745548 - G 74 -3.1 -5.04325 | opp_overlap 1745548 GTTAAATGAGAAAAA TGATGGC CTTTC GCTATCA TTTGCGTGCCAATTA TERM 1926 1746436 - 1746384 - G 85 -10.7 -3.83026 | opp_overlap 1746405 CGTTGGCACATTAAA TCGTTCACGAAATCGATTTAACGTC TGA GGCGTTAATCCAATTTCGGGAACTA AAATTAAGGCTTGTT TERM 1927 1747410 - 1747422 + G 72 -7.7 -3.91897 | GTATGGTGACCATGT GGAAC GGC GTTCC TTTGTCGGTGGAACC efp 1747058 - 1747624 + | protein translation elongation factor P (EF-P) TERM 1928 1748377 - 1748399 + G 71 -4.7 -4.68593 | opp_overlap 1748378, overlap 1748378 TTGAAGAATTAACAA ACGCTGACG AACAA CGACAGCGA TTTTTAAATGATAAC TERM 1929 1748398 - 1748378 - g 79 -8.2 -4.39877 | opp_overlap 1748378 1748377 TGAAGAATTAACAAA CGCTGACG AACAA CGACAGCG ATTTTTAAATGATAA CBU_1817 1747629 - 1748594 + | lysyl-tRNA synthetase TERM 1930 1748730 - 1748697 - f 78 -7.1 -4.44448 | opp_overlap 1748698, overlap 1748676 1748698 1748703 ATTACTTTAAATAAA TTAAAATATAAATAA AAAA TTATTTATATTTTAT TTTTTATTTACATTT TERM 1931 1748729 - 1748698 - f 79 -10.6 -3.25946 | opp_overlap 1748698, overlap 1748676 1748697 1748703 TTACTTTAAATAAAT TAAAATATAAATAA AAAA TTATTTATATTTTA TTTTTTATTTACATT TERM 1932 1748698 - 1748729 + F 100 -10.6 -5.67283 | opp_overlap 1748676 1748698 1748697 1748703 TTACTTTAAATAAAT TAAAATATAAATAA AAAA TTATTTATATTTTA TTTTTTATTTACATT TERM 1933 1748724 - 1748703 - f 80 -6.1 -4.72863 | opp_overlap 1748698, overlap 1748698 1748697 TTAAATAAATTAAAA TATAAATAA AAAA TTATTTATA TTTTATTTTTTATTT TERM 1934 1749278 - 1749263 - g 81 -3.2 -5.42198 | GGCTAAAAAAGAAAA TCGCCA AAGA TGCCGA ACATAAAAACCCGCT TERM 1935 1749407 - 1749439 + G 95 -3.3 -5.73978 | overlap 1749414 GAAGCGCTGCGGCGG GTATTGGGACAGCCG TAA CGGTTGGCGTATTAC TTTTTTATTTATGCT CBU_1818 1748815 - 1750260 + | hypothetical membrane spanning protein TERM 1936 1751031 - 1751019 - g 76 -2.7 -5.29885 | AATTGAAAAATAAAA TCCTT AAT AAAGA AAATAGTAATCTCAA CBU_1819 1750313 - 1751446 + | hypothetical membrane associated protein CBU_1820 1751987 - 1751463 - | hypothetical protein TERM 1937 1751714 - 1751704 - G 76 -4 -5.09426 | CTTAATTCTAAAAAA GAAT CAA ATTC TCCCCGATCGCTCAA CBU_1821 1752487 - 1751990 - | hypothetical protein sodC 1753193 - 1752603 - | superoxide dismutase TERM 1938 1754284 - 1754271 - g 74 -3.8 -4.91852 | TCGAGGAAAAAGAAA TGGC GGAATG GCCA ACAAATAAGAGGCCA CBU_1823 1753253 - 1754302 + | hypothetical protein CBU_1824 1754541 - 1754311 - | hypothetical protein TERM 1939 1754363 - 1754347 - G 89 -15.1 -2.52896 | GCAGGCGGGAATCCA GCGCGCC TTC GGCGCGC TGCGCACGTGTGCGC CBU_1825 1754604 - 1754951 + | hypothetical protein psd 1755804 - 1754956 - | phosphatidylserine decarboxylase TERM 1940 1755995 - 1756012 + G 83 -2.7 -5.47218 | overlap 1755997 GTGGGTTTAAACCCG TGGGAAA AGAA TTTCCTG TTTTTTTGCATCCCG TERM 1941 1756083 - 1756069 - g 70 -5.7 -4.43477 | CGTACTGAACGAAAA GTAGC AAAAG GCTAC AAAGGATTTACCTTT CBU_1827 1755811 - 1756956 + | multifunctional CCA protein CBU_1828 1758243 - 1756990 - | hypothetical protein lolB 1758250 - 1758882 + | outer membrane lipoprotein LolB prsA 1759057 - 1760016 + | ribose-phosphate pyrophosphokinase TERM 1942 1760094 - 1760111 + G 76 -2.7 -5.24647 | opp_overlap 1760094 1760097, overlap 1760095 TATTAAACCAACAAT GGATACT GCCG AGTATCA TTTTCTTTTCTCTCT TERM 1943 1761159 - 1761175 + G 100 -3.7 -6.47325 | TTTTCTCGGTGGTTG TCGCA GCTCCCA TGCGA TTTTTTTTGTTTTTT CBU_1831 1760021 - 1761469 + | hypothetical membrane spanning protein CBU_1831a 1762008 - 1762127 + | hypothetical protein CBU_1833 1762811 - 1762674 - | hypothetical protein rmlA 1762841 - 1763755 + | glucose-1-phosphate thymidylyltransferase TERM 1944 1763909 - 1763862 - T 72 -9.5 -3.07816 | gap 2, opp_overlap 1763862 1763908, overlap 1763846 CCCGTATGCAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGC TTCGCTCAGACGGGG CBU_1835 1765480 - 1764101 - | amine oxidase, flavin-containing TERM 1945 1764721 - 1764743 + g 95 -8.6 -5.27477 | AGATAATTTTTTTCA CGTTATTATT TTC AGTAATAACG TTTTTTACTTCCGCT CBU_1836 1766738 - 1765482 - | homoserine dehydrogenase, NAD binding domain CBU_1837 1767792 - 1766752 - | NAD-dependent epimerase/dehydratase family protein TERM 1946 1766959 - 1766937 - G 80 -8.6 -4.27316 | GTTGCCAATTTAAAA TTCGTTTAAT TTT ATCAAACGAA ACATAATAACTGCGA rfbC 1768358 - 1767789 - | dTDP-4-dehydrorhamnose 3,5-epimerase CBU_1839 1769594 - 1768368 - | aminobutyraldehyde dehydrogenase TERM 1947 1768698 - 1768715 + g 70 -6.9 -4.07885 | AAAAGCAATTTTTAG GGCTTCG CTAC CGATGCC TTTTAACAACCCATA TERM 1948 1768906 - 1768892 - G 76 -8.6 -3.87869 | TTAATTTTTTATAAA TTCCCT TAA AGGGAA TAAACGAATAATTTT TERM 1949 1769809 - 1769799 - g 74 -8.2 -4.1196 | opp_overlap 1769807, overlap 1769790 1769800 AATTCACGGGCAAAA GCGC GGC GCGC CGAATGCGGCGTTTT TERM 1950 1769807 - 1769820 + G 81 -9.5 -4.11394 | opp_overlap 1769799 1769800 GGCAAAAGCGCGGCG CGCCG AATG CGGCG TTTTGAAGATAAAGT TERM 1951 1769844 - 1769834 - g 72 -6.8 -4.1891 | opp_overlap 1769834 1769832 CGTTTTGAAGATAAA GTCC CCG GGAC TGTTTACGGTGCGGG TERM 1952 1770393 - 1770377 - g 72 -8 -3.90744 | GCTCTCGCGAAAGAA GCTGCT ACGGA AGCAGC GGAAGAAGAGGAAAC CBU_1840 1769744 - 1770478 + | 50S ribosomal protein L25/general stress protein Ctc TERM 1953 1770681 - 1770717 + G 74 -8 -4.05033 | opp_overlap 1770685 1770690 AGCCGACCACATTCA TGAACGAAAGCGGCCA AGCTG TCGCCGCTTTAGCTCA TTTCTATAAAATAAA pth 1770485 - 1771048 + | peptidyl-tRNA hydrolase TERM 1954 1771078 - 1771052 - f 81 -7.3 -4.59773 | gap 1, overlap 1771053 1771054 TTGCATTCTTAAAAA CTTCCTCTCCTG ATGG CAGGAGAGGC-G AAATGAGGTTCAACA TERM 1955 1771077 - 1771054 - f 76 -11 -2.61004 | overlap 1771052 1771053 GCATTCTTAAAAACT TCCTCTCCTG ATGG CAGGAGAGGC GAAATGAGGTTCAAC TERM 1956 1771278 - 1771253 - g 70 -2.7 -5.00884 | gap 1 AGCGGCTTGAAAAAA TTGCT-CAAATT GTT AATCCGAAGCAA ATTATCCCTACGACA CBU_1842 1771081 - 1772184 + | GTP-binding protein, probable translation factor TERM 1957 1772262 - 1772275 + G 79 -6.7 -4.67697 | CGTTAATTCTGCACT TGCCA ATAA TGGCA TTTGTTCTTTTACAA CBU_1843 1772188 - 1772592 + | hypothetical protein TERM 1958 1772595 - 1772583 - f 75 -5.5 -4.82901 | GTTTTTGGATAAAAA CTGCC ACT AGCAG GCAGGCTTGACATAA TERM 1959 1772701 - 1772685 - f 76 -10.9 -2.62396 | CAGTTGGTTAGAGCA CGGCATT CAT AATGCCG GTGTCGGTGGTTCAA TERM 1960 1772783 - 1772793 + F 75 -5.4 -4.71318 | GAAATACGGGAATTG CCTA TTC TAGG TTATTTTTTCCTATT TERM 1961 1772847 - 1772827 - f 72 -3.2 -5.09426 | gap 1 CTTAATTTCAAAAAA CCCCCGTCG TCCC CG-CGAAGG CGCATAGGCGTCAAC CBU_1843a 1772880 - 1773029 + | hypothetical protein TERM 1962 1773159 - 1773197 + F 95 -4.5 -5.78622 | gap 1 AAGCCCTCGATTCTT TGTCTGTCGTAGACG-GC CTAC GCACGGGAACGACGGACA TTTTTTTTCAACTCC TERM 1963 1773803 - 1773819 + G 71 -8.1 -3.72324 | TTTCAAGTCCTATAC CCATAAA AAA TTTATGG TTCTTAGTGGGAGTC CBU_1845 1773391 - 1774002 + | hypothetical membrane spanning protein CBU_1847 1774942 - 1774697 - | hypothetical protein TERM 1964 1774797 - 1774809 + g 74 -7.7 -4.12198 | overlap 1774792 AGTAAAATCTGCGCT TGAGC GGC GCTCA TTTTACCGGCTTGTA TERM 1965 1774942 - 1774952 + H 73 -5.4 -4.60808 | TAATCAATTTTTTCA TGAG AAC CTCA TTTCTATTTTTATCG TERM 1966 1775081 - 1775071 - H 73 -6.8 -4.20932 | AATATTTATTGAAAA CGCA TAA TGCG AATCCAACTGGAAGG TERM 1967 1775765 - 1775779 + H 72 -3.5 -5.07486 | GTTGAGTTCGCAGGC GCCGT TTCAT ATGGC TTTTTATTACGAATC CBU_1847b 1776549 - 1776911 + | hypothetical protein TERM 1968 1776963 - 1777010 + T 82 -11.5 -3.21099 | opp_overlap 1776970, overlap 1776967 1776970 AAAAGGTTTGAAGTC TGAATGAGAAGCCATTAGGTC AGGTAC GACTTTAGGGCTTCTTATTCA TTGGTACTAGCAAGC CBU_1849 1777246 - 1777046 - | hypothetical protein CBU_1850 1777949 - 1777464 - | hypothetical protein TERM 1969 1778223 - 1778245 + G 83 -5.6 -5.20331 | ACTGTGCCGCTTCAT TCGTTGGC CAATTGA GTCAACGA TTTTCTTTATTGTTT TERM 1970 1778336 - 1778349 + G 77 -3.1 -5.25699 | gap 1 AGGGGTTACTATGGA TG-GGC GGG GCCGCA TTTTTATTGTCTCCT TERM 1971 1778592 - 1778602 + G 72 -8.2 -3.86322 | overlap 1778598 GATCGATTACCCTCC GGGC ACT GCCC TTTGGTACTATTATT TERM 1972 1779229 - 1779240 + G 100 -4.4 -5.72622 | TTTATTGCAATTTTA GGTA CCGC TACC TTTTTTATTTATAAA TERM 1973 1779512 - 1779500 - g 76 -5.5 -4.82678 | TTATAAAAATGAAAA GACGC TCC ACGTC GTACCTTTTCGCTTC CBU_1851 1778164 - 1779960 + | hypothetical membrane spanning protein TERM 1974 1780012 - 1780024 + G 78 -6.3 -4.62313 | TATTGTTGCATTGGT GCTTA AAT TAAGC TTATTTTTCATTTTC CBU_1852 1779953 - 1781347 + | hypothetical protein CBU_1853 1781774 - 1781325 - | GtrA family protein CBU_1854 1782165 - 1781857 - | hypothetical cytosolic protein TERM 1975 1782376 - 1782401 + r 75 -9.8 -3.32963 | GAAGTTTTTGATTAC GGCCTGTTGA CGACTA TCAATAGGCC TTATGCAGTAACAGT TERM 1976 1782534 - 1782544 + r 73 -6.8 -4.17657 | opp_overlap 1782525 TCCAAATAGCGTACG GGAG AAC CTCC TTTTACGCTATACTA pilF 1782904 - 1782557 - | fimbrial biogenesis domain-containing protein CBU_1856 1784070 - 1782931 - | 3-hydroxyisobutyryl-CoA hydrolase oppD 1785711 - 1784119 - | oligopeptide transport ATP-binding protein TERM 1977 1784203 - 1784213 + g 76 -4 -5.04356 | TAACTGAGTTGGCCC TTGT TCG ACAA TTTTTCCTTCTTTCA TERM 1978 1784429 - 1784466 + g 76 -8.3 -3.96148 | opp_overlap 1784453 GCGATGCAGATACGC TGGCGCTCACCCCCTGA AAAT TCATGGGGATAACGCCA TTTGTAGTCGGGCGA TERM 1979 1784902 - 1784918 + g 70 -3 -4.98522 | gap 1, overlap 1784886 1784901 CGCTTTTGCTTCTAG C-AAGGC GGTT GCCTTTG TTTTTGTATCACGTT TERM 1980 1785549 - 1785572 + g 73 -5.2 -4.62069 | opp_overlap 1785548 1785555 TCAACGGGAGTAATT GCATAACAGC CAAT GCCGTCATGC TTTTTCCACTACCAG oppC 1787226 - 1785829 - | oligopeptide transport system permease protein TERM 1981 1786598 - 1786582 - G 71 -4.3 -4.62872 | ATTAATTGCCAAAAA GCGAACG ACC CACCCGC AAATCCAAATAAGAC TERM 1982 1787166 - 1787156 - G 100 -3.2 -5.93809 | CTCGCATAAAAAAAA GCAA TAA CTGC AATGATGAATAAGCC oppB 1788247 - 1787237 - | oligopeptide ABC transporter, permease protein TERM 1983 1787524 - 1787473 - G 70 -6.9 -4.08216 | gap 1 CCACGCCTGTCAAAA TCGGAA-TCAAACTGTTTTTCAAA ATATG TTTGTATAACACTTTGAATTCCGA TAATCCTTTAGCACG TERM 1984 1788048 - 1788031 - G 83 -2.6 -5.47218 | opp_overlap 1788031 TCGTATTGAAAAAAA GCGGTT TATCAT AGCCGC GTTCTTTTTTCCAAC TERM 1985 1789371 - 1789387 + H 75 -8 -3.99324 | GCTTGATCGAAACTT TCGGGA CTAAT TCCCGA TTTATCATAGTAACC TERM 1986 1791522 - 1791553 + G 86 -10.8 -3.90588 | opp_overlap 1791511 1791523, overlap 1791523 AAGACGCCTTTAAGC ATTGATCCCGCCGC TTGC GCAGCGGGATCAGA TTTAATTACGCAGTA TERM 1987 1791552 - 1791523 - g 87 -14.3 -2.71483 | opp_overlap 1791522 1791523, overlap 1791511 AGACGCCTTTAAGCA TTGATCCCGCCGC TTGC GCAGCGGGATCAG ATTTAATTACGCAGT TERM 1988 1791523 - 1791552 + G 89 -14.3 -2.94032 | opp_overlap 1791523 1791511, overlap 1791522 AGACGCCTTTAAGCA TTGATCCCGCCGC TTGC GCAGCGGGATCAG ATTTAATTACGCAGT CBU_1862 1790541 - 1791569 + | radical SAM domain-containing protein CBU_1863 1793370 - 1791559 - | hypothetical membrane spanning protein TERM 1989 1791889 - 1791878 - G 100 -4.4 -5.7946 | TTCTTAATAAAAAAA TCCA GAAT TGGA TTAAACAAGAAAAGC CBU_1864 1793729 - 1793634 - | hypothetical protein CBU_1865 1794292 - 1793750 - | hypothetical membrane associated protein TERM 1990 1794067 - 1794057 - G 75 -4.6 -4.99435 | GTCAACAACCAAAAA GCGC CCA ACGC GAACGCAAAAAAACT parC 1796556 - 1794295 - | DNA topoisomerase IV subunit A TERM 1991 1794674 - 1794685 + g 71 -2.2 -5.08824 | AATTTGATGACGGCT TTGC CACT GCGA TTTTTTACGTGCAGA CBU_1867 1796599 - 1796757 + | hypothetical protein CBU_1867a 1797044 - 1796901 - | hypothetical cytosolic protein CBU_1869 1797132 - 1797785 + | hypothetical protein TERM 1992 1798268 - 1798279 + GT 71 -7.2 -3.96148 | ACAGCGGTGAAGTTT GCGC TCAA GCGC TTTATCATGGACAAA TERM 1993 1798530 - 1798513 - gT 71 -4.1 -4.86939 | GAAGAAACCGAAAAA CAAGTGG AAAT CCATTTG GCCGACCATTTACGC pabA 1799274 - 1798669 - | anthranilate synthase component II CBU_1870 1798072 - 1798719 + | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase rpe 1799950 - 1799255 - | ribulose-phosphate 3-epimerase TERM 1994 1799967 - 1799988 + r 89 -5.9 -5.46129 | overlap 1799961 1799968 AAACCATGCTTCGCA CCTTACGAA TTTG TTCGTAAGC TTTTTTAATTTGTTG TERM 1995 1799968 - 1799987 + r 83 -9.4 -3.85237 | overlap 1799961 1799967 AACCATGCTTCGCAC CTTACGAA TTTG TTCGTAAG CTTTTTTAATTTGTT djlA 1800765 - 1799950 - | Dna-J like membrane chaperone protein TERM 1996 1801629 - 1801614 - g 83 -2.6 -5.5112 | overlap 1801619 GCGATTAAGAAAAAA TATGAT CAAT ACCATA TTGAAGAAGATCCCT TERM 1997 1802012 - 1802001 - g 70 -5.8 -4.30719 | opp_overlap 1802001 TTTTCTGATAATAAA TCGG TTAA CCGA TTTTACATTTACGGC TERM 1998 1802001 - 1802012 + G 70 -5.8 -4.35524 | opp_overlap 1802001 TTTTCTGATAATAAA TCGG TTAA CCGA TTTTACATTTACGGC CBU_1874 1800801 - 1802108 + | glutamate--cysteine ligase TERM 1999 1802139 - 1802118 - f 80 -6.5 -4.78326 | opp_overlap 1802118 1802127 TTTTAAAGAAAGAAA TCTCGGGCG CTTG CGGCCAAGA TTTTTAAAAAGGCAA gshB 1802162 - 1803127 + | glutathione synthetase TERM 2000 1803605 - 1803594 - g 73 -4.4 -4.87665 | TCCGAGGCAGAAAAA TTGG CTCG CCAA ATGAAATTGCCGCTG TERM 2001 1804157 - 1804102 - g 77 -3.2 -5.23943 | gap 1, opp_overlap 1804110 1804144 1804153, overlap 1804103 TAGTAAAAAAAGAAA TGCGAAT-CTTACGACGCCTCGTCGGC GCG GACGACGACGCACCGCAATTATTGGCG CTTGCTTTAAAAAAA CBU_1876 1803534 - 1804298 + | SAM-dependent methyltransferase CBU_1877 1805564 - 1804281 - | hypothetical ATPase TERM 2002 1804406 - 1804396 - G 100 -5.4 -5.84381 | opp_overlap 1804396 TTAGTAATAAAAAAA CCAA CTT TTGG CTTATAAGCTTCAGT TERM 2003 1805691 - 1805672 - R 82 -7.8 -4.56597 | gap 1 CTGGGCTTTTAAAAA CCAGG-GCC GCT GGCTCCCGG AAAGAGGAGAATTGT CBU_1878 1806128 - 1805709 - | iron-sulfur cluster insertion protein ErpA CBU_1879 1806224 - 1806853 + | peptide deformylase CBU_1880 1806850 - 1807269 + | hypothetical membrane spanning protein CBU_1881 1807439 - 1807266 - | rubredoxin TERM 2004 1808396 - 1808374 - g 72 -9.9 -3.19463 | gap 1 TCTATCAGGCAGGAA CGCTATCCGG TAAT CCGG-TAGCG ATGGCGGCAGGGCTT hemL 1807482 - 1808789 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 2005 1809095 - 1809143 + G 70 -2.6 -4.88405 | gap 1, opp_overlap 1809082 1809112, overlap 1809096 1809097 1809112 1809128 AAGGATAACTATTGT AATCCGACGGCAGAAAATATTTC CCGA GAAATATTTTTAGCC-TTGGAAA TTTTGTTTGAAGATT TERM 2006 1809112 - 1809127 + G 73 -4.8 -4.66833 | opp_overlap 1809112, overlap 1809097 1809096 1809095 TCCGACGGCAGAAAA TATTTC CCGA GAAATA TTTTTAGCCTTGGAA queD 1808786 - 1809340 + | queuosine biosynthesis protein CBU_1884 1809343 - 1809822 + | hypothetical exported membrane spanning protein TERM 2007 1809899 - 1809885 - T 79 -11.4 -2.71712 | overlap 1809884 GTCGTCCCCGCAAAG GCGCTG ACC CAGCGC ACGGCGTGCGCAGCG TERM 2008 1809912 - 1809928 + T 91 -13.7 -2.52896 | opp_overlap 1809923 1809924 CGCACGGCGTGCGCA GCGCGCT AAA AGCGCGC TGGATTCCCGCCTGC CBU_1886 1810197 - 1810057 - | hypothetical protein ponA 1812588 - 1810207 - | multimodular transpeptidase-transglycosylase PBP 1A TERM 2009 1810899 - 1810883 - G 87 -13.7 -2.92667 | overlap 1810863 1810880 GCAACCTGTAAAGGA GGCAGCG TGG CGCTGCC AAGCGCTAGCGAAAG CBU_1888 1812658 - 1813452 + | hypothetical protein TERM 2010 1813491 - 1813501 + F 71 -4 -4.84219 | CAAAAATTGCAACGC CAAA AAA TTTG TTTGTTTTATAGTTT TERM 2011 1813613 - 1813601 - f 81 -2.7 -5.64274 | CCATTTAGAAAAAAA GAAAA TTG CTTTC CTAACTAAGGAATTA TERM 2012 1813740 - 1813713 - f 70 -5.6 -4.37092 | ATTTCGCCTATAAAA CTCATCTCGGAA GCGC TTCCGACACAAG GTATTCTAATGGCGC TERM 2013 1813917 - 1813931 + F 78 -2.8 -5.4505 | overlap 1813908 CACTTTGCTGCTCTT GCAACA GCT TATTGC TTTTTTCTTCGCCCA CBU_1890 1814037 - 1814345 + | hypothetical protein TERM 2014 1815004 - 1814992 - gf 74 -3.3 -5.03314 | GTGACCTTCAAAAAA GCCAC TTT ACGGC TAAAAGTCACACCGG pilQ 1814326 - 1815387 + | type II and III secretion system family protein aroK 1815320 - 1815859 + | shikimate kinase aroB 1815856 - 1816938 + | 3-dehydroquinate synthase CBU_1894 1817202 - 1817017 - | hypothetical cytosolic protein TERM 2015 1817200 - 1817210 + g 74 -3.2 -5.11063 | overlap 1817194 1817187 GAGGGGCTTGAAGAA CACT AAC GGTG TTTTTCTTAGCTCCT CBU_1894a 1817380 - 1817225 - | hypothetical cytosolic protein CBU_1895 1817446 - 1817712 + | hypothetical protein CBU_1896 1818959 - 1817721 - | transporter, major facilitator family TERM 2016 1818218 - 1818202 - G 74 -5.8 -4.65078 | ATACTCTTAACAAAA GGCGCT AATAA AACGCC TGCAGTCATAAACGA TERM 2017 1820160 - 1820146 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 2018 1820222 - 1820202 - g 71 -2.4 -5.10461 | opp_overlap 1820203, overlap 1820203 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1896a 1819165 - 1820259 + | transposase CBU_1896b 1820528 - 1820256 - | hypothetical protein TERM 2019 1820583 - 1820544 - R 79 -10.9 -3.10343 | opp_overlap 1820544 1820543 1820550, overlap 1820550 ATACGTATGAGCGAA GCGAAATACGGGAACGT GAAAAG AAATTCCCGTATTTCAC CCTTTTTCAACACCT CBU_1899 1821161 - 1820580 - | putative methyltransferase TERM 2020 1821332 - 1821364 + r 91 -12.1 -4.08692 | GGACCCAGGTTAAGG GGCTAAGAAAAACAC GAT GCGCTTTTCTTAGCC TTTTAGCCGGGATTC TERM 2021 1821508 - 1821532 + r 70 -9.9 -2.71712 | opp_overlap 1821527, overlap 1821507 TAAGTTGACGCCTAT GCGCGCAGG TGGGAAT CCAGCGCGC CTTTGGCGCGCAGCG TERM 2022 1821543 - 1821527 - R 95 -15.1 -2.52896 | opp_overlap 1821508 1821507 GCAGGTGGGAATCCA GCGCGCC TTT GGCGCGC AGCGCACATAGTGCG TERM 2023 1821545 - 1821559 + r 80 -11.4 -2.87564 | CGCCTTTGGCGCGCA GCGCAC ATA GTGCGC TGTGTCCCCGCCTGC TERM 2024 1821593 - 1821630 + r 74 -9.2 -3.45023 | opp_overlap 1821593 GGGATGACGAAAGGA GCGGGGATGACGGG CTTTAAGTTT TTCGTCATTCCCGC TTGTGGTAATGATAG CBU_1901 1822988 - 1821657 - | M16 family peptidase TERM 2025 1822195 - 1822240 + g 73 -9.1 -3.42861 | opp_overlap 1822216 1822218 1822220 TGTCCTAAAATAATC GTGGTTTGTTGCGCTAAAAAA GGGA TTTGTTGCCGCAACACACCGC TTGCTGTTATCGCTT TERM 2026 1822240 - 1822216 - G 72 -3.5 -5.00616 | opp_overlap 1822195, overlap 1822218 1822220 TGTTGCGCTAAAAAA GGGATTTGTTG CCG CAACACACCGC TTGCTGTTATCGCTT TERM 2027 1822499 - 1822489 - G 80 -5.4 -5.09204 | ATAGCCGAATAAAAA GCTT TTG AAGC GACAACGTTTGGCGA CBU_1902 1824367 - 1822988 - | M16 family peptidase TERM 2028 1824236 - 1824220 - G 78 -5.8 -4.89009 | opp_overlap 1824220, overlap 1824208 ACACGGAAGTAAAAA CCACCG GCGCT CGATGG TCTTCTTTGACAATT ftsY 1824556 - 1825530 + | cell division protein TERM 2029 1825899 - 1825882 - g 89 -8.3 -4.87803 | opp_overlap 1825882 CACTCCGAAATAAAA CGCCGCG TTCG CGCTGCG TTGGATAAAGTCGGT ftsE 1825537 - 1826190 + | cell division ATP-binding protein TERM 2030 1826880 - 1826896 + G 91 -2.2 -5.77853 | overlap 1826873 TCTTTCATTCGGCGC CCGC TTTTATATC GCGG TTTTTTTTACGGCTT TERM 2031 1827028 - 1827045 + G 70 -5.7 -4.40882 | opp_overlap 1827028 TCCATGGATTAAGCA TAAAAAC GGGA GTTTTTA TTATTTTAATTTCTA ftsX 1826187 - 1827128 + | efflux ABC transporter, permease protein CBU_1906 1827170 - 1827319 + | hypothetical protein TERM 2032 1827421 - 1827395 - T 90 -3.7 -6.02919 | opp_overlap 1827394 CTAGAAACAAAAAAA CTCATTGTCGA AGGAA TCGAAAGTGAG CTTCAATTAAAAACA CBU_1907 1828323 - 1827607 - | acetyltransferase TERM 2033 1828273 - 1828300 + g 80 -10.6 -3.3039 | opp_overlap 1828270, overlap 1828265 1828276 CGGGAGAGGAAGCTG GCAGTTGGTAGG AACA CCTACCGACTGG TTGAATTCATTTTTC TERM 2034 1828276 - 1828297 + g 74 -10.9 -2.808 | opp_overlap 1828270, overlap 1828273 1828265 GAGAGGAAGCTGGCA GTTGGTAGG AACA CCTACCGAC TGGTTGAATTCATTT CBU_1908 1828452 - 1828354 - | hypothetical protein rpoH 1828489 - 1829355 + | RNA polymerase factor sigma-32 com1 1829381 - 1830139 + | outer membrane protein TERM 2035 1830268 - 1830254 - T 80 -11.4 -2.87564 | GCAGGCGGGGACACA GCGCAC TAT GTGCGC TGCGCGCCAAAGGCG TERM 2036 1830270 - 1830286 + T 95 -15.1 -2.52896 | opp_overlap 1830281 CGCACTATGTGCGCT GCGCGCC AAA GGCGCGC TGGATTCCCACCTGC CBU_1911 1830432 - 1830313 - | hypothetical cytosolic protein TERM 2037 1830489 - 1830445 - H 93 -14.5 -2.85354 | opp_overlap 1830448 1830449 1830462, overlap 1830450 CACGGGAATCCAAAC TAAAAGGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCCCTTA ATCTGGGTCCCCCCG TERM 2038 1830448 - 1830486 + H 86 -11.8 -3.2794 | opp_overlap 1830445 1830450, overlap 1830449 1830462 GGGAATCCAAACTAA AAGGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCCC TTAATCTGGGTCCCC TERM 2039 1830449 - 1830485 + H 95 -15.3 -2.5655 | opp_overlap 1830445 1830450, overlap 1830448 1830462 GGAATCCAAACTAAA AGGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCC CTTAATCTGGGTCCC TERM 2040 1830484 - 1830450 - H 100 -14.4 -4.5852 | opp_overlap 1830449 1830448 1830462, overlap 1830445 GAATCCAAACTAAAA GGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCTTAATCTGGGTCC TERM 2041 1830462 - 1830472 + H 76 -4.6 -5.06816 | opp_overlap 1830450 1830445, overlap 1830449 1830448 AAAGGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCT glyQ 1830769 - 1831728 + | glycyl-tRNA synthetase subunit alpha TERM 2042 1833091 - 1833073 - g 74 -10.2 -3.21912 | CTCGGAATTTATTAA GCCCCTGC GTG GCAGTGGC GGATCGCATCGACAC glyS 1831722 - 1833800 + | glycyl-tRNA synthetase beta chain sun 1833797 - 1835089 + | ribosomal RNA small subunit methyltransferase B CBU_1916 1835516 - 1835076 - | universal stress protein family protein TERM 2043 1835528 - 1835545 + H 70 -5.7 -4.37211 | CCATGAAAGGAATCC TTTTTCT AGGG AGAAAAA TTTATTCTAACTTTG rpmH 1836042 - 1836176 + | LSU ribosomal protein L34P rnpA 1836173 - 1836541 + | ribonuclease P protein component TERM 2044 1836623 - 1836636 + G 72 -8.1 -3.86202 | opp_overlap 1836623, overlap 1836616 1836618 CTTGTTATGCCGAAA CCGCT TTAA AGCGG TTTGGTGTGATAAAG TERM 2045 1836687 - 1836713 + G 77 -7.2 -4.42386 | GCGCTTACTGCGGTG TCATCCCTTCCA TCC TGGTGGGGTTGA TTTTGTGCCTGAAAA CBU_1919 1836577 - 1836747 + | hypothetical protein TERM 2046 1837880 - 1837897 + G 89 -2.7 -5.61689 | CTATTATTATCACGA CGATTCT GATC AAAATCG TTTTTTATTGGTTTT TERM 2047 1838432 - 1838422 - g 85 -8.2 -4.59424 | AAAGCGAAATTAAAA GCGC GGC GCGC TCGGAAGCGGAAAAG yidC 1836751 - 1838451 + | inner membrane protein oxaA CBU_1921 1838596 - 1838697 + | hypothetical protein TERM 2048 1839269 - 1839246 - g 71 -10.2 -2.72263 | gap 1, opp_overlap 1839260, overlap 1839245 ATACCGTTTTGAAAG CCGGCGCGCGC CAA GCCCGC-CCGG GGGAATTTTCTGAAC TERM 2049 1839831 - 1839818 - g 72 -3.1 -4.96848 | gap 1, overlap 1839819 CGCCGTACACAAAAA GCC-GT TCA ACAGGC CGATCTATTATTATT trmE 1838882 - 1840303 + | tRNA modification GTPase TrmE TERM 2050 1840344 - 1840304 - f 82 -8.3 -4.19746 | opp_overlap 1840303 1840308 1840338, overlap 1840308 TGTATCGGAAAATAA TCAATTCCCCGTATGGAGC GAA GCGGAATACGGGGAATTCA ATTCTTCACTGTACG TERM 2051 1840308 - 1840340 + F 72 -9.1 -3.29459 | opp_overlap 1840304 1840308, overlap 1840303 1840338 TCGGAAAATAATCAA TTCCCCGTATGGAGC GAA GCGGAATACGGGGAA TTCAATTCTTCACTG TERM 2052 1840340 - 1840308 - f 76 -9.1 -3.68798 | opp_overlap 1840308 1840303 1840338, overlap 1840304 TCGGAAAATAATCAA TTCCCCGTATGGAGC GAA GCGGAATACGGGGAA TTCAATTCTTCACTG gidA 1840616 - 1842499 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidB 1842531 - 1843145 + | methyltransferase GidB TERM 2053 1843234 - 1843252 + G 77 -7.3 -4.37247 | overlap 1843236 TGGCGGCTTCCTTGG GCGCGGC TAAAC GCCGCTC TTTATTAATTGATTT TERM 2054 1843236 - 1843250 + G 75 -8.5 -3.77023 | overlap 1843234 GCGGCTTCCTTGGGC GCGGC TAAAC GCCGC TCTTTATTAATTGAT soj 1843152 - 1843922 + | CobQ/CobB/MinD/ParA nucleotide binding domain protein parB 1843913 - 1844785 + | chromosome partitioning protein TERM 2055 1846630 - 1846620 - g 100 -4 -5.86465 | AAGAAGATAAAAAAA TTCA ACC TGAA ATAAAAAAAGAAATA TERM 2056 1846974 - 1846964 - g 84 -4.6 -5.40072 | opp_overlap 1846964 CTGCCTCGAAAAAAA GCAG CCG CCGC TTTTCGGTTTTGGGC TERM 2057 1847189 - 1847178 - g 73 -4.4 -4.83615 | CACCCGTCATAAAAA GCTT CGTC AAGC AACTTGACCTCGTCA CBU_1928 1844795 - 1847605 + | acyl-CoA synthetase CBU_1929 1847592 - 1848986 + | major facilitator transporter TERM 2058 1848979 - 1848963 - f 75 -5.9 -4.67038 | CGCTTAAAAGGAAAA GAAATCA TTT TGACTTC AATGTAAAAGTGGAC CBU_1930 1849038 - 1849220 + | hypothetical protein CBU_1930a 1849302 - 1849592 + | hypothetical protein TERM 2059 1849681 - 1849717 + G 75 -10.8 -2.88023 | overlap 1849680 AAGCTTTGGGCGGGT TTTCGTCACCTCGCGG TTTCC CCGCGAGATGACGACC CTTTAATAATCCTGG CBU_1931 1849612 - 1849743 + | hypothetical protein CBU_1932 1849945 - 1849745 - | hypothetical protein TERM 2060 1849808 - 1849833 + g 79 -3.9 -5.27769 | overlap 1849805 ACGAGCCTTCGACAA GCCGATAGCTA TCGC TTGTTTTCGGC TTTTTACTTTTTTCT CBU_1933 1850017 - 1850871 + | Ku protein TERM 2061 1852019 - 1851997 - g 81 -3.4 -5.42259 | opp_overlap 1852011 TTATTTCCAAAAAAA TCGATGCT GCTTATG AGCAACGA AGAAGCTCTAGTTGG TERM 2062 1852514 - 1852503 - g 70 -7.2 -3.98747 | opp_overlap 1852503 1852502 GAAAAAATCACGAAA CGCC AGTT GGCG GATTTTTATAGCAAA TERM 2063 1852627 - 1852605 - g 84 -8.6 -4.31835 | AATGGCTATAACAAA GAATGTTTTT TTC AAAAACATCC TGATCAAAATGGCGA TERM 2064 1853120 - 1853093 - g 70 -7.6 -3.95378 | opp_overlap 1853097, overlap 1853094 1853097 TTATATTCGAAATAA CCGAGGCGCCAC TTGT GTGGCGCCTTAT AGCACCCGAGCAAAA TERM 2065 1853119 - 1853094 - g 75 -11.1 -2.96745 | opp_overlap 1853097, overlap 1853093 1853097 TATATTCGAAATAAC CGAGGCGCCAC TTGT GTGGCGCCTTA TAGCACCCGAGCAAA TERM 2066 1853116 - 1853097 - g 89 -15 -2.71369 | opp_overlap 1853097, overlap 1853094 1853093 ATTCGAAATAACCGA GGCGCCAC TTGT GTGGCGCC TTATAGCACCCGAGC TERM 2067 1853097 - 1853116 + G 100 -15 -3.28712 | opp_overlap 1853097 1853094 1853093 ATTCGAAATAACCGA GGCGCCAC TTGT GTGGCGCC TTATAGCACCCGAGC TERM 2068 1853255 - 1853243 - g 71 -7.7 -3.76224 | overlap 1853249 CCTGGAGGCATTAAA CCAAG ACC CTTGG GAGGAGTTTTTCGAC CBU_1934 1850868 - 1853315 + | DNA ligase D CBU_1934a 1853378 - 1853485 + | hypothetical cytosolic protein TERM 2069 1853488 - 1853522 + T 79 -8.6 -4.08692 | opp_overlap 1853500, overlap 1853489 GGACCCAGATTAGGG GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCG TTTTAGCCGGGATTC TERM 2070 1853489 - 1853521 + T 82 -12.1 -3.04894 | opp_overlap 1853500, overlap 1853488 GACCCAGATTAGGGG GCTAAGAAAAACACC GAT GGCGCTTTTCTTAGC GTTTTAGCCGGGATT TERM 2071 1853510 - 1853500 - T 76 -4.6 -5.06414 | opp_overlap 1853489 1853488 GGGGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGCGTTT CBU_1936 1854988 - 1854191 - | hypothetical cytosolic protein TERM 2072 1854278 - 1854289 + g 74 -5.8 -4.61199 | TTCGGCGAGAGGATT TCCG TCGT CGGA TTTTATATATAAGCT TERM 2073 1856749 - 1856769 + G 74 -11.1 -2.75647 | overlap 1856748 1856765 CAACAGAGGCGTTCT CTGCGTTGC TGG GCGGCGCAG CTTGTGTCATTCCCA atpI 1856529 - 1857014 + | ATP synthase F0, I subunit TERM 2074 1857205 - 1857189 - g 82 -12.3 -2.87931 | opp_overlap 1857200 CTCATCTTTTATATA GTAGCGC GGC GCGCTAC GGCTAGCGTTCCTGG atpB 1857015 - 1857809 + | F0F1 ATP synthase subunit A atpE 1857827 - 1858129 + | ATP synthase C chain TERM 2075 1858157 - 1858196 + F 83 -10.6 -3.62096 | gap 1, overlap 1858165 1858166 CGTCGTCCTCGCGAA GGCGGGGGCCCAG-CGCGC AAA GCGCGTCTGGATTTACGCC TTTGCGGTAATGACA TERM 2076 1858165 - 1858188 + F 73 -8.8 -3.63968 | gap 1, overlap 1858157 1858166 TCGCGAAGGCGGGGG CCCAG-CGCGC AAA GCGCGTCTGGA TTTACGCCTTTGCGG TERM 2077 1858166 - 1858187 + F 83 -12.3 -2.7806 | gap 1, overlap 1858165 1858157 CGCGAAGGCGGGGGC CCAG-CGCGC AAA GCGCGTCTGG ATTTACGCCTTTGCG TERM 2078 1858553 - 1858537 - g 71 -2.2 -5.12785 | opp_overlap 1858546 GAAGCAAAAAATAAA GCGC GAGAGGAAG GCGC CCATCTTATACAACT atpF 1858258 - 1858728 + | F0F1 ATP synthase subunit B TERM 2079 1858785 - 1858753 - g 70 -9.1 -3.1886 | overlap 1858770 ATTTAACGCTAGCAA GACCTTACGCAAAAG CAG CCTTTGCGGATGGCC AAAAGGCCAATCAGC atpH 1858728 - 1859285 + | ATP synthase delta chain atpA 1859293 - 1860840 + | F0F1 ATP synthase subunit alpha TERM 2080 1860891 - 1860879 - f 79 -9.1 -3.79668 | opp_overlap 1860862 1860881 1860882 1860884, overlap 1860870 ATCCAACGCACGAAA TGCGC AGC GCGCA AGGCGCGCCTGGATT TERM 2081 1861295 - 1861324 + G 71 -9.3 -3.28791 | overlap 1861315 GGACCTCTGCGTCAT CGGTCGAAAAGGG GAAG CCTTTTTCCGCCG TTATGGGGGAAACGT atpG 1860939 - 1861808 + | ATP synthase F1, gamma subunit TERM 2082 1862315 - 1862354 + G 82 -8 -4.56597 | gap 1 GGTATTAAAGTGGTC GATTTGCTTTGCC-CCTTT GCT AAGGGAGGCAAAGTGGGTC TTTTTGGAGGCGCGG atpD 1861844 - 1863295 + | ATP synthase beta chain TERM 2083 1863734 - 1863722 - g 80 -9.1 -4.08557 | TCCGCTAAAGAAGAA GCCGA ACG TCGGC TCGCCAAACAGAAAG atpC 1863419 - 1863847 + | ATP synthase epsilon chain TERM 2084 1864415 - 1864405 - g 71 -2.4 -5.17576 | GATGAATTTAAAAAA GTGG TTA CCCC AATTAAATAATAATA TERM 2085 1864491 - 1864515 + G 83 -11.3 -3.29511 | overlap 1864493 1864494 1864507 TAGCTGAAGGCTGCC CCGTGGGCGGC GTG GCCGCCCAGTG TTGTGAAGAAGTGCA TERM 2086 1864493 - 1864513 + G 86 -12.5 -3.21593 | overlap 1864491 1864494 1864507 GCTGAAGGCTGCCCC GTGGGCGGC GTG GCCGCCCAG TGTTGTGAAGAAGTG TERM 2087 1864494 - 1864512 + G 100 -16 -2.52742 | overlap 1864493 1864491 1864507 CTGAAGGCTGCCCCG TGGGCGGC GTG GCCGCCCA GTGTTGTGAAGAAGT TERM 2088 1864775 - 1864762 - g 77 -4.5 -5.0538 | overlap 1864764 1864765 CGTTATTTTAAAAAA CACCA CCGT CGGTG AAAATACCGAAATTC TERM 2089 1864932 - 1864920 - g 100 -5.5 -5.72207 | TCGAAATGAAAAAAA CCACC TTA GGTAG AGGCAGCAAGGCGAA TERM 2090 1865129 - 1865116 - g 74 -5.9 -4.66609 | CACCGTAGGCAAAAA CGCCA CCAT CGGCG CCGGCTCTACACTCT glmU 1863866 - 1865233 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 2091 1865433 - 1865449 + F 91 -13.7 -2.54896 | opp_overlap 1865444 1865445, overlap 1865414 GCGCACACGTACGCT GCGCGCT AAA AGCGCGC TGGATTCCCTGCGCG TERM 2092 1865465 - 1865444 - f 73 -7.1 -4.07568 | opp_overlap 1865433 1865414, overlap 1865445 CGCTGCGCGCTAAAA GCGCGCTGG ATTC CCTGCGCGG GAATGACGAAACCTA TERM 2093 1865464 - 1865445 - f 78 -10.6 -3.04398 | opp_overlap 1865433 1865414, overlap 1865444 GCTGCGCGCTAAAAG CGCGCTGG ATTC CCTGCGCG GGAATGACGAAACCT CBU_1947a 1865500 - 1865685 + | hypothetical cytosolic protein CBU_1948 1865705 - 1865881 + | hypothetical membrane associated protein TERM 2094 1865941 - 1865977 + T 84 -8.2 -4.71061 | gap 1, overlap 1865931 1865945 TTCAGGTGAATTTTA CCTGGCAAATTTCACGT TATA AC-TGAAATTTGCTTGG TTTTTGAGTGTGGAT TERM 2095 1865945 - 1865973 + T 77 -8.4 -3.83644 | gap 1, overlap 1865931 1865941 GGTGAATTTTACCTG GCAAATTTCACGT TATA AC-TGAAATTTGC TTGGTTTTTGAGTGT TERM 2096 1867116 - 1867094 - T 71 -4.1 -4.96028 | GTTTAAAAAAAATAA CATTCTCTG TCTAC CAGTGAACG AATTTTTGTTGAATC TERM 2097 1867239 - 1867198 - T 100 -6.6 -5.88197 | gap 1, overlap 1867200 1867201 1867202 TTAAACACAAAAAAA TACTTTCCCACCATCCTCC CACGT GCAGGATGGTGGGAC-GAA TGGCGTATGCGTAAT TERM 2098 1867237 - 1867200 - T 88 -9.2 -4.5577 | gap 1, overlap 1867198 1867201 1867202 AAACACAAAAAAATA CTTTCCCACCATCCTCC CACGT GCAGGATGGTGGGAC-G AATGGCGTATGCGTA TERM 2099 1867237 - 1867201 - T 75 -9.4 -3.29802 | overlap 1867200 1867198 1867202 AACACAAAAAAATAC TTTCCCACCATCCTCC CACGT GCAGGATGGTGGGACG AATGGCGTATGCGTA TERM 2100 1867236 - 1867202 - T 90 -12.9 -2.55441 | overlap 1867200 1867201 1867198 ACACAAAAAAATACT TTCCCACCATCCTCC CACGT GCAGGATGGTGGGAC GAATGGCGTATGCGT CBU_1950 1867700 - 1867254 - | hypothetical membrane spanning protein CBU_1951 1867762 - 1867878 + | hypothetical protein TERM 2101 1868024 - 1868006 - g 70 -7.6 -3.94773 | opp_overlap 1867995 CATCGAAAAAATCAA TTTTTCAA TTT TTGAAAAA CACCGTGTGGGAATC CBU_1952 1867944 - 1869542 + | ABC transporter ATP-binding protein CBU_1953 1870069 - 1869500 - | hypothetical membrane spanning protein TERM 2102 1870219 - 1870189 - RH 86 -7.5 -5.09426 | gap 1, overlap 1870190 1870206 CCTAATTTCAAAAAA CCTGTCGTCCCCGC AAAG GCGGGGACC-CAGC GCACTTCGTGTGCTG TERM 2103 1870218 - 1870190 - RH 83 -11 -3.64933 | gap 1, overlap 1870189 1870206 CTAATTTCAAAAAAC CTGTCGTCCCCGC AAAG GCGGGGACC-CAG CGCACTTCGTGTGCT TERM 2104 1870267 - 1870246 - RH 72 -9.4 -3.04398 | overlap 1870206 1870245 1870255 GCTGCGCGCTAAAAG CGCGCAGA ATTCCG CCTGCGCG AAATGACGGAACTGT CBU_1954 1871179 - 1870307 - | (2R)-phospho-3-sulfolactate synthase TERM 2105 1870729 - 1870743 + gH 73 -2.8 -5.16572 | overlap 1870731 TGGTAATTTCAGGTT TTGGTT TTA AACCTA TTTTTTGAATTCGCT TERM 2106 1871379 - 1871400 + GH 85 -7.2 -4.98255 | AAATACGATTGCAAG CCGGCGCT GGCGAA GGCGCTGG TTTTTCTGATTCGGC pntAA 1871168 - 1872427 + | NAD(P)(+) transhydrogenase (AB-specific), alpha-1 subunit TERM 2107 1872541 - 1872579 + FH 100 -16.2 -3.28416 | opp_overlap 1872543, overlap 1872543 1872555 GGGAATCCCGGCTAA AAGGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCTC TTAATCTGGATCCTC TERM 2108 1872577 - 1872543 - fH 100 -14.4 -4.08692 | opp_overlap 1872541 1872543 1872555 GAATCCCGGCTAAAA GGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC TCTTAATCTGGATCC TERM 2109 1872543 - 1872577 + FH 100 -18.8 -3.20573 | opp_overlap 1872543, overlap 1872541 1872555 GAATCCCGGCTAAAA GGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC TCTTAATCTGGATCC TERM 2110 1872555 - 1872565 + FH 76 -4.6 -5.09204 | opp_overlap 1872543, overlap 1872543 1872541 AAAGGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCTCT TERM 2111 1872590 - 1872612 + FH 79 -5.4 -4.98672 | overlap 1872591 GCCTCTTAATCTGGA TCCTCCCGAC TCG GCCGTGAGGG TTTTGTGTTTTTCAA pntAB 1872810 - 1873109 + | NAD(P)(+) transhydrogenase (AB-specific), alpha-2 subunit TERM 2112 1874071 - 1874055 - g 71 -2.3 -5.10163 | opp_overlap 1874055 AAGCGCAAAACAAAA TTTGG GAACTCG CCAAA TTATTAATGGAACGA pntB 1873106 - 1874476 + | NAD(P)(+) transhydrogenase (AB-specific), beta subunit TERM 2113 1874719 - 1874729 + T 74 -4 -5.16237 | AACTCTTTGGCGAAC GAAA GGT TTTC TTTTTTGATGAAATT TERM 2114 1875179 - 1875161 - T 71 -6.8 -4.11484 | overlap 1875164 TGTAAGTCTCCAAAA TAAGCTTG TAT CAAACTTA AGGCCGTAACGGTTG CBU_1960 1875918 - 1875136 - | hypothetical protein TERM 2115 1875954 - 1875897 - G 100 -16.8 -3.14931 | gap 3, opp_overlap 1875902 1875908 1875916, overlap 1875902 GGTAGCCCGTATGAA GCGAAGCGAAATACGGG--GACAATAGAT GAC ATC-ATTGTTTTCCCGTATTTCGCTTCGC TCATACGTATATGGA TERM 2116 1875902 - 1875949 + g 81 -11.7 -3.10343 | gap 2, opp_overlap 1875897 1875902, overlap 1875908 1875916 CCCGTATGAAGCGAA GCGAAATACGGGGACAATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGTAT CBU_1959a 1875965 - 1876237 + | hypothetical protein CBU_1959b 1877328 - 1876234 - | transposase TERM 2117 1876271 - 1876291 + g 71 -2.4 -5.10461 | opp_overlap 1876272, overlap 1876272 TCTTGGCGTGTTAAA AGCGCCCA AATGA TCGGCGCA TTTTTATTCGCTAAC TERM 2118 1876333 - 1876347 + g 74 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 2119 1877663 - 1877688 + r 81 -2.5 -5.60993 | gap 1, overlap 1877665 1877666 AAGTTTTCTATTGAA GA-TGTCCGCTT TTC AGGCGGGCCCTC TTTTTTTATAAAAAA hemK 1880338 - 1879505 - | peptide release factor-glutamine N5-methyltransferase TERM 2120 1879558 - 1879537 - G 71 -8.7 -3.56092 | opp_overlap 1879552 CCATCATCCTTGAAA GACCGGC TAAATCAC GCCGGTC GGTAATTTCGCGATA prfA 1881426 - 1880341 - | peptide chain release factor 1 hemA 1882664 - 1881423 - | glutamyl-tRNA reductase TERM 2121 1883361 - 1883349 - g 95 -3.3 -5.63517 | opp_overlap 1883349 TCCGGAAACAAAAAA GACCG AAT CGGTT CCTTTTAAAATGGGC CBU_1967 1882741 - 1883970 + | Bcr/CflA subfamily drug resistance transporter folB 1884250 - 1883948 - | dihydroneopterin aldolase TERM 2122 1884019 - 1884036 + g 78 -8.5 -4.08216 | AGGGTTTAGTGATGC TGAGTTG AAGC CAACTCA TTTTAAAGCGCGTCA dksA 1884737 - 1884294 - | RNA polymerase-binding protein DksA dapF 1885709 - 1884879 - | diaminopimelate epimerase CBU_1971 1885857 - 1885699 - | hypothetical protein TERM 2123 1885800 - 1885812 + g 74 -3.5 -5.14563 | overlap 1885797 AAAAAGCAAGGCTTA TTATT AAT AATAA TTTTTTCATGACGAA CBU_1972 1886279 - 1886058 - | LuxR family transcriptional regulator TERM 2124 1886271 - 1886261 - G 74 -6.8 -4.41348 | opp_overlap 1886268 TCGGGGTTAAATAAA CACC GGG GGTG TGAATCACCTATATA CBU_1973 1886449 - 1886294 - | hypothetical cytosolic protein CBU_1974 1886459 - 1886554 + | hypothetical protein TERM 2125 1886728 - 1886739 + G 77 -2.2 -5.34309 | GGGTTGCCGGAGGAT TTGC ATTT GCGA TTTTTGTTTCCTCAT TERM 2126 1887226 - 1887252 + G 82 -7.2 -4.65747 | CAGGAGGAAATCGAG GCGATTGGAAAG TGG CTAACCGATCGC TTTTCTTAAACGTTC CBU_1975 1886551 - 1887261 + | phospholipase/carboxylesterase family protein CBU_1976 1887900 - 1887241 - | nucleotidyl transferase family protein CBU_1977 1889003 - 1887906 - | phosphotransferase enzyme family protein TERM 2127 1888660 - 1888626 - GH 74 -2.2 -5.29445 | overlap 1888627 CGTTAATAACAAAAA GCCCTGTTTCTTAT CTTCAGC ATAAATAACAGGGA CATTTAAACCCAATT TERM 2128 1889136 - 1889148 + GH 73 -5.5 -4.57837 | overlap 1889137 CTCTACCCACCGGTT TGTCG TAT CGACG TTTTTACCAGCATAT TERM 2129 1889764 - 1889774 + GH 100 -5.4 -5.85244 | overlap 1889762 GCTTTTGCATATCGG TAGG GTG CCTA TTTTTTATTTTCCTT TERM 2130 1889839 - 1889823 - gH 71 -6.5 -4.17425 | opp_overlap 1889836 ATAATTATCGGAAAA CGGGTTT TTT AATCCCG TACGCGGGGCATAGC TERM 2131 1891011 - 1891024 + GH 72 -9.5 -2.99932 | GTGTTTGTCTCACTC CGGGG TGCA CCCCG TCTAATTATCATTAT ostA 1888985 - 1891597 + | organic solvent tolerance protein TERM 2132 1892079 - 1892059 - g 70 -6.1 -4.17023 | TTAATTATTTCAAAA TTGCAGCAC CAA GCGTTGCAA GACACCATTTCGATC TERM 2133 1892276 - 1892260 - g 74 -3.7 -5.00765 | overlap 1892262 AAGCAATTACAAAAA GGTTCAA GCT TTGAAAC AGCAATGAAAATGCA CBU_1980 1891603 - 1892568 + | putative peptidyl-prolyl cis-trans isomerase surA pdxA 1892568 - 1893491 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 2134 1893618 - 1893590 - f 84 -10.3 -3.87551 | overlap 1893591 ACTACCAAACTTAAA CCCGTCATTCCGC TCG GGGGAATGACGAA GCCTTAAACTGAAAT TERM 2135 1893617 - 1893591 - f 80 -11.6 -2.91807 | overlap 1893590 CTACCAAACTTAAAC CCGTCATTCCGC TCG GGGGAATGACGA AGCCTTAAACTGAAA ksgA 1893643 - 1894419 + | dimethyladenosine transferase uspA 1894532 - 1894966 + | universal stress protein family protein CBU_1984 1895135 - 1895509 + | hypothetical protein TERM 2136 1895520 - 1895544 + F 100 -10.7 -5.55695 | opp_overlap 1895513 1895520 CATAATTAGCCACAA CCCTGGCGACT TTT AATCGCTAGGG TTTTTTATATTGTTA TERM 2137 1895544 - 1895520 - f 80 -10.7 -3.40309 | opp_overlap 1895520, overlap 1895513 CATAATTAGCCACAA CCCTGGCGACT TTT AATCGCTAGGG TTTTTTATATTGTTA CBU_1985 1895554 - 1896252 + | hypothetical protein TERM 2138 1896977 - 1896938 - g 87 -8 -5.04987 | overlap 1896927 AAGACGTTGAAAAAA TCAACAAAGTATTGGCCC AAGT GCACCAAAACTTTATTGA CCAAGTTATTCAGGG sppA 1896316 - 1897257 + | U7 family peptidase TERM 2139 1897854 - 1897871 + G 78 -5.5 -4.91109 | GCGCTACATTTGCAA CGCATTC ACTC GTATGCG TTTTTGTGATGCCAA apaH 1897270 - 1898145 + | diadenosine tetraphosphatase CBU_1987a 1898294 - 1898428 + | hypothetical protein TERM 2140 1899509 - 1899495 - g 74 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC TERM 2141 1899571 - 1899551 - g 71 -2.4 -5.10461 | opp_overlap 1899552, overlap 1899552 GTTAGCGAATAAAAA TGCGCCGA TCATT TGGGCGCT TTTAACACGCCAAGA CBU_1987b 1898514 - 1899608 + | transposase CBU_1987c 1899877 - 1899605 - | hypothetical protein TERM 2142 1899940 - 1899893 - H 83 -11.7 -3.10343 | gap 2, opp_overlap 1899893, overlap 1899899 1899909 ATACGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATTGTCCCCGTATTTCGC TTCGCTCATACGGGC relB 1900067 - 1900321 + | RelB relE 1900321 - 1900596 + | RelE folA 1901054 - 1900569 - | dihydrofolate reductase CBU_1994 1901854 - 1901051 - | hypothetical cytosolic protein CBU_1995 1902050 - 1902337 + | acylphosphatase CBU_1996 1902867 - 1902313 - | D,D-heptose 1,7-bisphosphate phosphatase fmt 1903824 - 1902880 - | methionyl-tRNA formyltransferase TERM 2143 1904630 - 1904608 - g 78 -6.2 -4.63486 | opp_overlap 1904607 1904629 AGCCGCCGAACAAAA CCGGGAAG TTTTCGC CATCCCGG GTTCAATCCGAAACC TERM 2144 1904810 - 1904845 + G 74 -7.6 -4.19953 | TGCATCGGATTTGAG GTCACTTCCATTGATC AACT GATCGCTCGAAGTGGC TTTTCGGCTTCCATC CBU_1998 1904012 - 1904938 + | DNA protecting protein DprA smg 1904935 - 1905414 + | Smg protein TERM 2145 1906480 - 1906466 - g 87 -4.9 -5.41359 | overlap 1906467 AACCAAATCAAAAAA CGCGC AAGAA GCGCA CGAAGCTATTCGTCC TERM 2146 1907687 - 1907649 - g 82 -6.9 -4.96848 | gap 1 CGCGGCACAGAAAAA GTATGCCCCCAAAAAAGT TGTA ACTTTAT-AGAGGCATAC GATGGAGACAAACCA topA 1905417 - 1907714 + | DNA topoisomerase I CBU_2001 1907891 - 1907721 - | hypothetical protein TERM 2147 1908120 - 1908089 - g 100 -13.6 -3.36919 | opp_overlap 1908091 1908092, overlap 1908080 AGAAAATGCTGACAA CCGCGGCTGCGCCG TCTT CATCGCAGCCGCCG GCCTCGCCGCCCATC purE 1907922 - 1908422 + | phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit CBU_2003 1908425 - 1908985 + | sua5/YciO/YrdC/YwlC family protein TERM 2148 1909297 - 1909261 - f 70 -9.5 -2.56728 | opp_overlap 1909263, overlap 1909260 1909274 AGGACCCAGATTAAG GGGCTAAGAAAAACACC AAT GGCGCTTTTCTTAGCTT TTTAGCCGGGATTCC TERM 2149 1909263 - 1909295 + F 95 -12.1 -4.57341 | opp_overlap 1909261 1909260 1909274 GACCCAGATTAAGGG GCTAAGAAAAACACC AAT GGCGCTTTTCTTAGC TTTTTAGCCGGGATT TERM 2150 1909284 - 1909274 - f 76 -4.6 -5.06816 | opp_overlap 1909263, overlap 1909261 1909260 AGGGGCTAAGAAAAA CACC AAT GGCG CTTTTCTTAGCTTTT CBU_2003a 1909428 - 1909568 + | hypothetical protein CBU_2004 1910701 - 1909646 - | heptosyl transferase glycosyltransferase family 9 protein rstB 1911986 - 1910709 - | signal transduction histidine kinase-like protein CBU_2006 1912720 - 1911983 - | transcriptional regulatory protein TERM 2151 1912026 - 1912041 + g 70 -5.4 -4.39386 | gap 1, opp_overlap 1912023 1912021 GCCGCTAACACATAG CCA-CCG CCA CGGATGG TTTTGATGATTTGGG CBU_2007 1913956 - 1912769 - | hypothetical protein TERM 2152 1915245 - 1915258 + G 93 -9.5 -5.01732 | CATCATGGTTATATT CCCCG TATT CGGGG TTTTTTAAAGGGGTT TERM 2153 1915582 - 1915561 - g 73 -5.2 -4.65895 | gap 1, overlap 1915564 TTCGCCAGCTAAAAA CGA-CCCAA AAAAA TTGGGATCG ACCGCGAGGAATGGA argS 1914102 - 1915880 + | arginyl-tRNA synthetase TERM 2154 1917189 - 1917164 - g 74 -10.7 -2.69874 | opp_overlap 1917170, overlap 1917163 1917170 ATAAACTACGATAAG GGTAAATTATT AGTT AATAATTTACC GTCCCATGCTCCGCA CBU_2009 1915877 - 1917211 + | hypothetical protein CBU_2010 1917208 - 1917522 + | hypothetical protein TERM 2155 1917627 - 1917611 - f 77 -10.8 -2.87564 | opp_overlap 1917623 GGATGTCTCTAGATA CCGCGG TCAAG CCGCGG ACGACGTGCTTTTAA hslV 1917713 - 1918327 + | ATP-dependent protease hslV TERM 2156 1918476 - 1918493 + G 70 -9.1 -3.22298 | opp_overlap 1918475 1918476 AAAATGATGCCAAAC GCGCGGT AGCC ATCGCGC TTCGTAATCGCTGGC TERM 2157 1918628 - 1918672 + G 72 -10.1 -2.87211 | overlap 1918622 1918623 TCCGATCTCGCGGGT GCCCCCTTCCTTAAAATTG AAGCAAC CAAATTTACGGAAGTGGGC TATGTCGGGCGCGAT hslU 1918352 - 1919749 + | ATP-dependent endopeptidase hsl ATP-binding subunit CBU_2013 1920800 - 1919703 - | hypothetical protein TERM 2158 1920981 - 1920991 + H 74 -4 -5.06735 | TCTCGTATGTTATTC TCTT AAA AAGA TTTTTCTCATTTATC CBU_2014 1921123 - 1921506 + | hypothetical membrane associated protein TERM 2159 1923254 - 1923241 - g 76 -3.9 -5.09895 | TAGCTATTCAAAAAA TTGAA GAAA TTCAA GATTGTTTATTGCAT CBU_2016 1923186 - 1923782 + | hypothetical cytosolic protein TERM 2160 1924169 - 1924180 + G 74 -7.2 -4.18018 | opp_overlap 1924150, overlap 1924178 CCATGCTGAACGTGG GGCG TCGT CGCC TTTTGGATCAAGGCA ubiE 1923862 - 1924614 + | ubiquinone/menaquinone biosynthesis methyltransferase ubiE CBU_2018 1924614 - 1925228 + | hypothetical protein ubiB 1925225 - 1926850 + | 2-polyprenylphenol 6-hydroxylase TERM 2161 1927013 - 1926979 - T 82 -8.6 -4.15453 | opp_overlap 1926991 GAATCCAGGCTAAAA GTCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGGTCC TERM 2162 1926991 - 1927001 + T 76 -4.6 -5.06414 | opp_overlap 1926979 AAAGTCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC CBU_2020 1928685 - 1927255 - | glutamate/gamma-aminobutyrate antiporter TERM 2163 1927482 - 1927494 + g 77 -4.9 -4.97824 | TTCCTCCCGGAATTC GAAAA CAT TTTTC TTTTCTTTCAGTTTT TERM 2164 1927681 - 1927668 - G 74 -5.9 -4.71426 | opp_overlap 1927673 1927674 CTTGCATCAACAAAA CACCC AGAG GGGCG CCTCGTTTATTTCGA TERM 2165 1928087 - 1928069 - G 74 -2.4 -5.19212 | ACCACTACTAAAAAA GCCAAATT AGG AATATGAC TAAAATGAGGAATAA CBU_2021 1930042 - 1928747 - | putative ATPase CBU_2023 1931762 - 1931517 - | hypothetical protein CBU_2024 1931840 - 1932790 + | putative cystathionine beta-synthase TERM 2166 1933376 - 1933362 - g 72 -5.7 -4.58395 | TTGATCTTGCAAAAA TTGCG GAAAT CGCAA AAGAAAAAAATATCA TERM 2167 1933580 - 1933570 - g 82 -8.2 -4.49781 | opp_overlap 1933577, overlap 1933571 1933572 AAAATATTTACAAAA CGCC ATA GGCG CTATCGCCGCGCCTT metC 1932869 - 1934032 + | putative O-succinylhomoserine (thiol)-lyase TERM 2168 1934072 - 1934043 - T 86 -9.9 -4.05875 | opp_overlap 1934024 1934043 1934044, overlap 1934024 1934021 1934037 1934044 TTTAAAAAACTTAAA GCCCTCATCTCCG CAGG CGGGGACGAGGGG TTTTTTTTGAAATTA TERM 2169 1934043 - 1934072 + T 100 -9.9 -5.81032 | opp_overlap 1934024 1934021 1934043 1934037 1934044, overlap 1934024 1934044 TTTAAAAAACTTAAA GCCCTCATCTCCG CAGG CGGGGACGAGGGG TTTTTTTTGAAATTA TERM 2170 1934044 - 1934071 + T 100 -13.4 -4.06993 | opp_overlap 1934024 1934021 1934043 1934037 1934044, overlap 1934024 1934043 TTAAAAAACTTAAAG CCCTCATCTCCG CAGG CGGGGACGAGGG GTTTTTTTTGAAATT TERM 2171 1934071 - 1934044 - T 91 -13.4 -3.0244 | opp_overlap 1934024 1934044 1934043, overlap 1934024 1934021 1934043 1934037 TTAAAAAACTTAAAG CCCTCATCTCCG CAGG CGGGGACGAGGG GTTTTTTTTGAAATT CBU_2027 1935058 - 1934771 - | hypothetical protein CBU_2028 1936013 - 1935267 - | hypothetical protein TERM 2172 1935388 - 1935404 + g 83 -10.9 -3.6284 | TGTTGTTGTTTTTTA GCCCATT GAT AATGGGC TTTCCAATCATCCTT TERM 2173 1936030 - 1936041 + r 89 -4.4 -5.67967 | GGTGCATTTTGGTAA GCTT CAAG AAGC TTTTTTTCTCATCAT TERM 2174 1936083 - 1936099 + r 100 -15.1 -2.94464 | overlap 1936078 TCAGTTCTCTTTAGG GGGCGGC TGT GCCGCCC TGTCGTATTAATCTT CBU_2029 1936739 - 1936107 - | hypothetical protein metK 1936877 - 1938058 + | S-adenosylmethionine synthetase TERM 2175 1939226 - 1939212 - g 74 -5.6 -4.60487 | opp_overlap 1939214, overlap 1939214 CAGTATCCTGAAAAA TACCCC ATC GGGGTT TACGTTTTACCCAAA TERM 2176 1939224 - 1939214 - g 72 -8.2 -3.91506 | opp_overlap 1939214, overlap 1939212 GTATCCTGAAAAATA CCCC ATC GGGG TTTACGTTTTACCCA TERM 2177 1939214 - 1939224 + G 72 -8.2 -3.92659 | opp_overlap 1939214 1939212 GTATCCTGAAAAATA CCCC ATC GGGG TTTACGTTTTACCCA ahcY 1938060 - 1939376 + | adenosylhomocysteinase CBU_2032 1939403 - 1940167 + | GAF domain-containing protein CBU_2033 1940449 - 1940189 - | hypothetical cytosolic protein TERM 2178 1941168 - 1941153 - R 72 -9 -3.38812 | overlap 1941134 1941131 1941133 TCCTCTGGAAGAAGA GGCTTC ACCA GAAGCC GGCCTGTCTCCGGAA TERM 2179 1941271 - 1941253 - R 72 -8.8 -3.61398 | TTGCCTCCGGAAGAA GAGCCGCC TGT AACGGCTC CTCCCGAGGAAGAAG CBU_2036 1941953 - 1941777 - | hypothetical protein TERM 2180 1941849 - 1941816 - G 76 -6.5 -4.58297 | overlap 1941818 GACCAAAAACATAAA GCCCGTCATCCCCGC GCAG GCGGGGATCCAGCGC ACACATGCGCAGCGC TERM 2181 1941860 - 1941878 + g 70 -10.2 -2.52464 | opp_overlap 1941855 AGCGCACACATGCGC AGCGCACC GAA GGTGCGCC TGGATTACCGCCCGC TERM 2182 1943259 - 1943278 + H 71 -6.4 -4.18018 | AGAGAAAATCGCTTA TTTGCCAG CACG CGGGCAAA TTTTCCGTGGCACAC TERM 2183 1946626 - 1946601 - g 77 -6.9 -4.51196 | gap 1, overlap 1946603 CTGAAATGCAGAAAA TGGCTGACCGTT TAC AACGGTC-GCAA CACGAATTATTCCAG CBU_2040 1945802 - 1947130 + | HlyD family type I secretion membrane fusion protein CBU_2041 1947156 - 1947491 + | PAS domain-containing protein TERM 2184 1948715 - 1948703 - T 79 -5.5 -4.87893 | AATGGCAATCAAAAA TCCCC GTA GGAGA AATTAAATTATCCAT TERM 2185 1949410 - 1949425 + T 71 -6.1 -4.16397 | opp_overlap 1949409 1949410 ATTTACAACAGAAAC GGGTG TTTGGT CACCC TCTTTTATTTTAAAA TERM 2186 1950395 - 1950385 - T 79 -3.2 -5.40072 | opp_overlap 1950391 TCCCTTCCAAAAAAA CAGC AAC GCTA ACGGCGATTGATAAT TERM 2187 1951690 - 1951708 + T 74 -3.8 -5.09426 | gap 1, overlap 1951690 TTAGACTTCACCATT CC-CGGG CGGGAA CCCGAGG TTTTTTGAAATTAAG CBU_2046 1951832 - 1951725 - | hypothetical protein TERM 2188 1951806 - 1951844 + g 100 -13 -4.14392 | opp_overlap 1951798 1951797 1951809, overlap 1951820 CGCAAAGGCGGGAAT CCAGCGCGCTTTTAGCGC GCT GCGCACGCAGTGCGCTGG TTTTGGAAATTAAGA TERM 2189 1951825 - 1951809 - G 86 -13.7 -2.53392 | opp_overlap 1951806 1951820, overlap 1951798 1951797 AAAGGCGGGAATCCA GCGCGCT TTT AGCGCGC TGCGCACGCAGTGCG TERM 2190 1951820 - 1951841 + g 87 -13.7 -3.09718 | opp_overlap 1951809 1951798 1951797, overlap 1951806 TCCAGCGCGCTTTTA GCGCGCTGC GCAC GCAGTGCGC TGGTTTTGGAAATTA metF 1952783 - 1951911 - | methylenetetrahydrofolate reductase TERM 2191 1952777 - 1952787 + g 74 -6.8 -4.31833 | opp_overlap 1952768 GAGAAAGATGCGACG CGTC CAT GACG TTTGTCTCTTATTTT metE 1955128 - 1952801 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 2192 1953915 - 1953931 + g 100 -2.9 -5.97575 | opp_overlap 1953912, overlap 1953916 CGCCGCATCAAACGT TCGGTAA CGC TTGCCGC TTTTTTTTCTACGTT TERM 2193 1953916 - 1953930 + g 70 -6.4 -4.16105 | opp_overlap 1953912, overlap 1953915 GCCGCATCAAACGTT CGGTAA CGC TTGCCG CTTTTTTTTCTACGT TERM 2194 1955229 - 1955252 + r 80 -6 -4.8048 | overlap 1955232 GTTTTTTAATGCCCG CAAGCTGATT ATCA AATCGGCATG TTTTTAATATAACGA trpS 1956383 - 1955313 - | tryptophanyl-tRNA synthetase TERM 2195 1956518 - 1956497 - R 71 -5.2 -4.64861 | opp_overlap 1956504, overlap 1956493 GGCCTCGAAAACAAA TTAACCCC CTCCCC GAGGTTAA ATTGTGAATTTTCCT CBU_2051a 1957817 - 1957578 - | hypothetical protein CBU_2052 1958783 - 1957881 - | hypothetical protein TERM 2196 1958127 - 1958116 - G 74 -3.6 -5.04249 | GGGCTAAAAAAGAAA GAGG GAGA CCCC AAGGACGGGGAGTTC uvrD 1959158 - 1961329 + | DNA helicase II TERM 2197 1961640 - 1961653 + G 73 -4.5 -4.82901 | overlap 1961641 1961644 ATCCCTTATTGTTGT TGTCG CCAT CGACG TTTTTATCGACGGCA TERM 2198 1961661 - 1961680 + G 73 -2.7 -5.04249 | overlap 1961644 1961660 CATCGACGTTTTTAT CGACGGC ATTCTC GTCGGCG TTTCTTTTTTAGCAA CBU_2055 1961326 - 1962039 + | zinc uptake transporter CBU_2056 1962747 - 1962085 - | hypothetical protein TERM 2199 1962800 - 1962786 - R 72 -8.6 -3.55202 | TATTTTTAAATAATA TGCTAG ATA CTAGCA GGCCAAATCATGCCG CBU_2057 1963913 - 1962936 - | hypothetical cytosolic protein CBU_2058 1965662 - 1964331 - | proline/betaine transporter TERM 2200 1964526 - 1964490 - G 71 -3.7 -4.76802 | gap 1 TTTAAAAATAAGAAA CGTGCATATGAGGGGG CTTAAT CCGCCCCATAT-CGCG TAGCCGAGGTTATAA TERM 2201 1966908 - 1966924 + r 77 -5.1 -5.00027 | opp_overlap 1966906 1966908 GGGAAGAAGAAAATA TTCGACG TTT CTTCGAA TTTTATATTTTTCAT CBU_2061 1967706 - 1967569 - | hypothetical protein TERM 2202 1968241 - 1968226 - R 89 -5.4 -5.42265 | CCAAATTATAAAAAA TTCCCG GCTC CAGGAA GAAAATTCAAAGGAA TERM 2203 1968549 - 1968566 + r 82 -8.5 -4.14345 | ACGCGCTACCCCTTT CATCCTT TCCA AAGGATG TTTCGTTTCGTATTC TERM 2204 1969021 - 1969010 - R 76 -4.4 -5.09895 | TATTTATTCAAAAAA CTTC GGCT GAAG AGCTAGAACAAATAT CBU_2065 1969778 - 1969140 - | hypothetical protein CBU_2067 1971994 - 1970594 - | transporter, MFS superfamily TERM 2205 1970971 - 1970961 - GR 70 -5.4 -4.35663 | opp_overlap 1970961 AATAATATTAACAAA TCGT AAA ACGA TAATTGCGGGACCAA TERM 2206 1971604 - 1971563 - GR 76 -3.7 -5.10665 | gap 1 ACTTAAGAAACAAAA TGCGC-TCCCAATTCCGGTT AAA AACCGAAAAAGAGAAGCCCA GAAAATCGATGTTGT CBU_2068 1973273 - 1971933 - | transporter, MFS superfamily TERM 2207 1972046 - 1972024 - GR 74 -4.9 -4.66938 | gap 1, opp_overlap 1972024, overlap 1972028 AGCGCTAACACAAAA GCAATTGGCA TAAT CGCCAAT-GC TAATTGATAATCGCT TERM 2208 1972145 - 1972131 - GR 85 -5.7 -5.18357 | TAAGCGAGCAAAAAA GGGTT GGGTG AACCC GCCGGCCATAATTAA TERM 2209 1972357 - 1972337 - GR 72 -9.7 -3.01783 | overlap 1972332 1972328 1972340 TTAAAATTAACGACA CAATGGCGC CAA GCACCATCG GCATGCGGCGACGCT TERM 2210 1972354 - 1972340 - GR 70 -7.8 -3.63078 | overlap 1972332 1972328 1972337 AAATTAACGACACAA TGGCGC CAA GCACCA TCGGCATGCGGCGAC TERM 2211 1972549 - 1972569 + gr 81 -5.4 -5.05712 | opp_overlap 1972549, overlap 1972543 AGTGAGGTATATAAA CCCCCAAA CCAAT TTTGGCGG TTTTTAATTGTTTGT TERM 2212 1973204 - 1973192 - GR 85 -7.7 -4.7261 | AGGCAGCAAAACAAA CAACC CAA GGTTG CAAAGGGTAATCGTA CBU_2069 1974004 - 1973414 - | thymidine kinase CBU_2070 1974431 - 1974021 - | chorismate mutase family protein TERM 2213 1974605 - 1974591 - g 100 -7.2 -5.48825 | opp_overlap 1974591 CAGTATTCAAAAAAA CAAATC GTG GATTTG TACCTTTCCTATTTT CBU_2071 1974507 - 1974989 + | hypothetical membrane spanning protein TERM 2214 1975067 - 1975030 - f 80 -10.1 -3.6682 | opp_overlap 1975030 1975030 1975029 1975035 1975056, overlap 1975035 CTGTATGGAGCGAAA CGAAATACGGGAA CTGTTATTCGTT TTCCCGTATTTCG CTTCATAATACGGGC TERM 2215 1975030 - 1975067 + F 72 -10.1 -2.52516 | opp_overlap 1975030 1975035, overlap 1975030 1975029 1975035 1975056 CTGTATGGAGCGAAA CGAAATACGGGAA CTGTTATTCGTT TTCCCGTATTTCG CTTCATAATACGGGC CBU_2072 1975209 - 1975706 + | hypothetical protein CBU_2073 1975742 - 1976644 + | acyltransferase family protein TERM 2216 1976928 - 1976949 + G 84 -8.7 -4.30576 | GTCGGTGCTTTTATT CGTCGCG AAGATCCA CGCGACG TTTTAATAGTAAAGG hemC 1976628 - 1977551 + | porphobilinogen deaminase TERM 2217 1977748 - 1977709 - g 71 -3.7 -4.81083 | gap 1 GCGAATTATTAAAAA TCATACCC-ACAAAAAAG CTATC CTTTGCTGTCGGGCACGA GCGGACGGCGGAAAG aroD 1977551 - 1978252 + | 3-dehydroquinate dehydratase CBU_2076 1978262 - 1978579 + | hypothetical protein hemD 1978569 - 1979375 + | uroporphyrinogen-III synthase TERM 2218 1979506 - 1979459 - T 72 -9.5 -3.09516 | gap 2, opp_overlap 1979459 GCCCGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGC TTCGCTCATACGGGC CBU_2078 1980567 - 1979521 - | Fic family protein TERM 2219 1980967 - 1980980 + G 74 -5.9 -4.59414 | GCCGCGTCTTTAAGC GCCGC TAGC GTGGC TTTTAGTTCTTATCA CBU_2079 1980877 - 1981281 + | hypothetical protein CBU_2080 1981362 - 1982324 + | uroporphyrin-III C-methyltransferase TERM 2220 1983212 - 1983202 - g 76 -4 -5.08824 | TCTGCACTTAAAAAA GAAT GGA ATTC CAATTTAGTTTCTAC hemY 1982329 - 1983507 + | HemY CBU_2082 1983510 - 1984277 + | hypothetical protein TERM 2221 1984404 - 1984422 + G 83 -3.8 -5.34365 | CTACAACTTGTCTAG CCGTTGCT AAA AGTAAGGG TTTTTCTTGTTATGC queC 1984295 - 1985029 + | queuosine biosynthesis protein QueC TERM 2222 1985090 - 1985051 - f 82 -11.7 -3.07816 | gap 1, opp_overlap 1985060, overlap 1985057 CCCGTATGGAGCGAA GCGAAATACGGGGAATTA AAACG CAATT-CCCGTATTCCGC TAACGCCCCATACGG CBU_2084 1985305 - 1985424 + | hypothetical protein CBU_2085 1985436 - 1985732 + | hypothetical protein TERM 2223 1985890 - 1985851 - T 82 -11.7 -3.07816 | gap 1, opp_overlap 1985860, overlap 1985857 CCCGTATGGAGCGAA GCGAAATACGGGGAATTA AAACA CAATT-CCCGTATTCCGC TAACGCCCCATACGG rho 1987175 - 1985919 - | transcription termination factor rho TERM 2224 1986852 - 1986874 + g 79 -7 -4.72272 | opp_overlap 1986841, overlap 1986841 TAAAGCGAAGTAGCG TTCGCTTTCT TTA GGAGGGCGAA TTTTTCCTGAAACCG trx 1987689 - 1987351 - | thioredoxin TERM 2225 1987773 - 1987783 + H 70 -5.4 -4.37658 | opp_overlap 1987773 GAGGCAGTAAGAGTA GGAA CAT TTCC TTTTATGCAGCCGTT TERM 2226 1988406 - 1988422 + G 71 -8 -3.78793 | GGGGCTTACTGGGCT GGCTAG GGGCG CTAGCC TTATTACTCATTCTG TERM 2227 1989372 - 1989362 - g 76 -5.4 -4.82333 | ACAATAACGCAAAAA GAAG TTC CTTC AGAAATCTATTCGAT CBU_2088 1988102 - 1989454 + | sodium:neurotransmitter symporter family protein TERM 2228 1989455 - 1989478 + T 83 -11 -3.66666 | overlap 1989456 ATCAGTTCAATTTGA ATCTCGGTCG CAAG CGACCGAGAC TTTCCCCATTTTGAA TERM 2229 1989456 - 1989477 + T 93 -14.5 -2.79518 | overlap 1989455 TCAGTTCAATTTGAA TCTCGGTCG CAAG CGACCGAGA CTTTCCCCATTTTGA TERM 2230 1989496 - 1989516 + T 76 -3.2 -5.21683 | gap 1, overlap 1989495 1989494 TCCCCATTTTGAATT TCGCC-GCG CTTG CGCCGGAGA TTTCTTTTTTTAAAT CBU_2089 1990130 - 1989549 - | integral membrane protein proC 1990951 - 1990127 - | pyrroline-5-carboxylate reductase CBU_2091 1991634 - 1990948 - | hypothetical protein TERM 2231 1991017 - 1991033 + g 71 -10.1 -2.80016 | overlap 1991014 CCCCGCTGCGATAGC CGCGCGA AAG TCGTGCG TCATTCCTAATGACA pckA 1993177 - 1991624 - | phosphoenolpyruvate carboxykinase TERM 2232 1993042 - 1993026 - G 71 -3.7 -4.77165 | TCTTTGACAATAAAA CGATC TTTCGGC GATCG ACCCGTGCGTTTCCC algH 1993272 - 1993856 + | transcriptional regulator CBU_2094 1993849 - 1994274 + | hypothetical protein pyrB 1994267 - 1995199 + | aspartate carbamoyltransferase SEQUENCE gi|29648114|ref|NC_004704.1| Coxiella burnetii RSA 493 plasmid pQpH1, complete sequence (length 37393) CBUA0001 79 - 537 + | DNA-binding protein CBUA0003 671 - 1129 + | hypothetical protein TERM 1 2044 - 2017 - f 71 -4.9 -4.56597 | gap 2, opp_overlap 2023 CTTTGGTCCTAAAAA CCATGC--GCGGG ATTG CCCGCTTACATGG TCGACCGAAAAAGCA TERM 2 2023 - 2036 + F 72 -9.5 -3.09516 | opp_overlap 2017 TCCTAAAAACCATGC GCGGG ATTG CCCGC TTACATGGTCGACCG CBUA0006 2546 - 3571 + | hypothetical protein CBUA0007 4854 - 3769 - | hypothetical protein TERM 3 6733 - 6749 + r 74 -3.7 -5.02074 | overlap 6734 ATATGGCGATAACCT GTTTCTG CCT CAGAAAA TTTTTTCCCCGCTCG TERM 4 9435 - 9410 - R 81 -2.5 -5.64274 | gap 1, overlap 9411 9412 CCACGGATAAAAAAA CGGGCGCAGTAC TGA GCACTACG-CTG ACCTACGATGATCTG CBUA0010 12595 - 11375 - | phage integrase family site specific recombinase TERM 5 12310 - 12328 + g 74 -3.8 -5.0133 | GCGGCTTTGTTTCCC CTATCCAG GTT TTGGGTGG TTTTTTACAAAAATA CBUA0011 12830 - 13000 + | hypothetical protein TERM 6 13192 - 13175 - T 90 -9.1 -5.03314 | opp_overlap 13170 13175 CCTACCGTTAAAAAA GCGCTCA CGAG CGAGCGC TTTTGTTAGTGGGAT TERM 7 13175 - 13192 + T 88 -8.4 -4.71828 | opp_overlap 13175, overlap 13170 CCTACCGTTAAAAAA GCGCTC ACGAGC GAGCGC TTTTGTTAGTGGGAT CBUA0012 13760 - 13245 - | hypothetical protein TERM 8 14256 - 14237 - H 71 -9.4 -2.78996 | opp_overlap 14245, overlap 14236 TATTCGGATTTAAAG TGTGCAAT GTTT ATTGCACA ATGAAATAAACTTAT CBUA0013 14418 - 15149 + | hypothetical protein TERM 9 15440 - 15459 + F 81 -5.7 -5.15381 | TGCTTTTTTTTTAAC GCAGCCA CATTAA TGGTTGC TTTTTTAGATCTCTT TERM 10 15638 - 15625 - g 79 -3.9 -5.24989 | opp_overlap 15625 GGATACATTAAAAAA GATTA TTCA TAATC TTTCTGCGCGGGATT CBUA0014 15536 - 15769 + | hypothetical protein TERM 11 15813 - 15797 - f 73 -5.9 -4.64861 | overlap 15793 CTTGTCTAAAAGAAA TTGCTGA GAT TCAACAA TATCAAAACGCCTTT TERM 12 16034 - 16021 - f 78 -3.8 -5.18355 | opp_overlap 16021 GCTAAAAATGAAAAA GGTC AAATTA GACC TGAATTTAAAAATTG TERM 13 16457 - 16444 - g 79 -6.7 -4.62872 | opp_overlap 16444 AGGAATTCCGAAAAA GAAGC TGGC GCTTC TTTTGGAGAAAGTTC TERM 14 16444 - 16457 + G 70 -6.7 -4.08692 | opp_overlap 16444 AGGAATTCCGAAAAA GAAGC TGGC GCTTC TTTTGGAGAAAGTTC TERM 15 16618 - 16598 - g 89 -9.7 -4.46775 | CACCTAAAAGAGAAA CAGATTCCG AAA CGGAAACTG AAGAGGAATCAACTA CBUA0015 16225 - 16662 + | hypothetical protein CBUA0016 16686 - 17711 + | CbhE protein CBUA0017 17945 - 17739 - | hypothetical protein TERM 16 17810 - 17785 - G 74 -9.7 -3.29649 | opp_overlap 17779 ATGTCACGAGAGCAA GCTGGCTCTTC TGGA GAAGCGCCAAC ACCGCCCTTTAAAAA TERM 17 17990 - 17978 - R 71 -6.3 -4.3014 | ATATACCGACGAAAA CTTCT TTA AGAAG TGTGAAATGGAATTT TERM 18 18383 - 18373 - R 93 -8.2 -5.49809 | opp_overlap 18376 CAAATCCTAAAAAAA CGCG TTC CGCG AGCTATTTGGAGATG TERM 19 18994 - 18973 - R 80 -4.4 -5.28176 | opp_overlap 18973 TGGATGGAGAAAAAA GAGGGG ATGTTGTTGA CCCCTC TATTGGCTACGCTGC CBUA0020 20587 - 19736 - | hypothetical protein TERM 20 20553 - 20564 + g 100 -4.4 -5.9873 | ACTGCATTTTGGTAA GCTT CAAG AAGC TTTTTTTTCTCATCA CBUA0021 21666 - 20614 - | hypothetical protein TERM 21 20724 - 20708 - G 78 -5.7 -5.0133 | overlap 20709 TAGTTTTCCAAAAAA CGTCGGC TCG GCCGCCA CCGCCGACCAGCATG CBUA0022 22124 - 22435 + | hypothetical protein CBUA0023 23269 - 22568 - | hypothetical protein TERM 22 22916 - 22939 + g 75 -9.6 -3.53012 | GTTGCGAGGTTGTAT TTCGACTCCC ATAA GGGAATCGAA TTTAAAGAGGCAGGC TERM 23 23212 - 23225 + g 82 -5.3 -5.31456 | GCAGAGTTTCCTCAA TAGCA CAAT TGCTA TTTTTTATAGATTGA TERM 24 23432 - 23442 + H 74 -4 -5.07523 | TTTCAGCCGTCCATT CTTT TAA AAAG TTTTATTTCTCTCTC TERM 25 23571 - 23593 + H 70 -3.4 -4.91109 | overlap 23575 CCTTCACCATATCTT GTAGTTTTCG AAT CGAAAATCGC TTTTTATACTGAGAA CBUA0024 23713 - 24156 + | hypothetical protein CBUA0025 24542 - 24282 - | hypothetical protein TERM 26 24430 - 24441 + g 75 -4.4 -5.02074 | overlap 24410 TCGACGGTCGATGCG CCAA TTTT TTGG TTTTTTACCACCTGG TERM 27 24458 - 24469 + g 79 -3 -5.42259 | TTTTTACCACCTGGG CAAA GAAG TTTG TTTTTTTCAAAATAG CBUA0026 24901 - 25131 + | hypothetical protein CBUA0027 25720 - 25379 - | DNA-binding protein CBUA0028 26085 - 25720 - | hypothetical protein TERM 28 25919 - 25947 + g 80 -4.5 -5.29782 | overlap 25907 25923 GTTCGAAGCCCACCT CGTTTTCCTTTAC CTA GTATAGGAATCCG TTTTTTATAGATATA TERM 29 27638 - 27659 + H 91 -11.7 -3.99347 | TTTTTACCGTTTGCG CTTCAATCC CTTT GGATTGAAG TTCTTTGACTGCTTT CBUA0031 28244 - 28864 + | hypothetical protein CBUA0032 28854 - 29600 + | Ser/Thr protein phosphatase family protein CBUA0033 29790 - 30143 + | hypothetical protein TERM 30 30205 - 30192 - T 72 -4.5 -4.77036 | GGTTATTATTAAAAA GGACC TCGT GATCC TACGCTTAATGAGCA CBUA0034 30619 - 30413 - | hypothetical protein CBUA0036 32418 - 31549 - | parB protein, putative CBUA0037 32782 - 34002 + | parA protein, putative CBUA0038 33995 - 34999 + | repB protein, putative TERM 31 35026 - 34977 - f 100 -19.5 -3.44289 | gap 1, overlap 34978 34982 TAGAAATTGAATTAA GTCAATCCGG-AGCTCCGGATTGA CGC CCAATCCGGAGCTCCCGGATTGGA GCTTGAGCCAAATAT TERM 32 35025 - 34978 - f 100 -23 -2.6585 | gap 1, overlap 34977 34982 AGAAATTGAATTAAG TCAATCCGG-AGCTCCGGATTGA CGC CCAATCCGGAGCTCCCGGATTGG AGCTTGAGCCAAATA TERM 33 35021 - 34982 - f 100 -22.4 -3.24166 | gap 1, overlap 34978 34977 ATTGAATTAAGTCAA TCCGG-AGCTCCGGATTGA CGC CCAATCCGGAGCTCCCGGA TTGGAGCTTGAGCCA TERM 34 35111 - 35100 - g 73 -4.4 -4.74504 | opp_overlap 35100 AGTCGAACTGAAAAA GCAT GTCA ATGC TATTCATTGTTCAAA TERM 35 35140 - 35164 + G 70 -2.8 -4.96388 | opp_overlap 35131 35130 35127, overlap 35131 AATAACCTTACTTTG GTGCAAAGAA AGTTA TTCAATGCAC TTTTATTTAATGCTT CBUA0039 35056 - 36345 + | repA protein, putative TERM 36 36846 - 36870 + G 74 -3.5 -5.0538 | overlap 36850 GGTATTCTTCAGCCG CGGCTTGAACC ATC GCTTCAAATCG TTTTTTGGCGTCCGC CBUA0040 36400 - 36978 + | hypothetical protein