TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.387242 %AT, 2410257 nt, 22348 terms. Intergenic: 0.445529 %AT, H2T: 396399 nt, 3088 terms; T2T: 114499 nt, 1611 terms; H2H: 175037 nt, 2469 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|86604733|ref|NC_007775.1| Synechococcus sp. JA-3-3Ab, complete genome (length 2932766) TERM 1 1266 - 1282 + G 75 -4.3 -4.7497 | opp_overlap 1260, overlap 1269 GGGACATCAGCCAGG CGCGGCA AAT TGCCATG TTTTTGATGCGTCAC dnaA 71 - 1474 + | chromosomal replication initiation protein TERM 2 2099 - 2085 - g 100 -9.2 -5.7946 | CTTGGAAGAAAAAAA CCGCCG CCT CAGCGG GGTGAGCTATGGGGC CYA_0003 1645 - 2334 + | hypothetical protein CYA_0002 3152 - 2331 - | hypothetical protein TERM 3 2412 - 2357 - G 80 -4.6 -4.82901 | gap 1, overlap 2358 2379 CTGCCTGCACAAAAA CCACCCAGCCGAAGCTGAGATAGCGCT CCA AGCGCAACCCCA-CCTGGGCAAAGTGC CAGCGCAACTGGTCT TERM 4 2460 - 2439 - G 77 -4.4 -4.82901 | gap 1, overlap 2440 2441 GTCTGCGGAGAAAAA GC-GAAGGC CGGTC GCCTCCAGC AACTGCTGCACCCTC TERM 5 3008 - 2986 - G 77 -2.6 -5.00616 | overlap 2987 2988 GCGGCGGCCAAAAAA TCCACCGC TCCAAAG GCGGTGAT GGGGTAGATCTGGCC TERM 6 3218 - 3184 - R 100 -10 -5.08255 | AGCCGCAAAACAAAA GGGCAGTTGCCGGG CGCCGGC CCCAACAACCACCC TCCCAGGTTAATCAA CYA_0004 5142 - 3256 - | FtsH family metalloprotease TERM 7 3589 - 3601 + g 76 -7.7 -4.26076 | GGTCACCATTTGCCG CACCA GGT TGGTG TTTTGCTGCAGGTCG TERM 8 4474 - 4463 - G 78 -3.6 -5.04385 | GAGAGGCTGAAAAAA GGCA CTCC CGCC TCGCCAGCAATGGCT TERM 9 5106 - 5092 - G 72 -4.2 -4.60797 | CTGCCAGAGACAAAA GCCC AGCATGA GGGC AATTAGCCAGCGCTG CYA_0005 6143 - 5268 - | short chain dehydrogenase/reductase family oxidoreductase CYA_0006 6134 - 6247 + | hypothetical protein CYA_0007 6354 - 7019 + | hypothetical protein CYA_0008 9606 - 7057 - | type II DNA topoisomerase, A subunit CYA_0009 9806 - 11209 + | phosphoglucomutase/phosphomannomutase family protein CYA_0010 11660 - 11268 - | glyoxalase family protein thiC 13177 - 11810 - | thiamine biosynthesis protein ThiC CYA_0012 14220 - 13486 - | hypothetical protein TERM 10 13589 - 13604 + g 93 -3.2 -5.56673 | opp_overlap 13589, overlap 13582 AGCTTTTTGAAAAAG GGATCC GAGA GGATAC TTTTTTCTTCTAGCT CYA_0013 14957 - 14217 - | hypothetical protein TERM 11 14775 - 14764 - G 70 -7.2 -4.01135 | overlap 14757 14765 CTGAACAACACCAAA GCCG GTGG CGGC ACCAACTCCAAAAAT CYA_0014 15462 - 14998 - | GUN4-like family protein CYA_0015 16040 - 15513 - | hypothetical protein gvpW 16965 - 16201 - | gas vesicle protein W TERM 12 17364 - 17396 + G 86 -8.3 -4.57073 | opp_overlap 17371, overlap 17367 17369 17371 GATTTTCGCCGCTGG CAAGGGATCCCGCAG CCG CAGCGGGATCTGCTG TTTTTGCGGGAGGTG TERM 13 17367 - 17394 + G 71 -8.4 -3.90048 | gap 1, opp_overlap 17371, overlap 17364 17369 17371 TTTCGCCGCTGGCAA G-GGATCCCGCAG CCG CAGCGGGATCTGC TGTTTTTGCGGGAGG TERM 14 17369 - 17391 + G 75 -13.4 -3.01831 | opp_overlap 17371, overlap 17367 17364 17371 TCGCCGCTGGCAAGG GATCCCGCAG CCG CAGCGGGATC TGCTGTTTTTGCGGG CYA_0018 17166 - 17786 + | hypothetical protein surE 18500 - 17769 - | stationary phase survival protein SurE gap-1 18689 - 19720 + | glyceraldehyde-3-phosphate dehydrogenase, type I folK 20212 - 19706 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folB 20590 - 20219 - | dihydroneopterin aldolase folP 21446 - 20577 - | dihydropteroate synthase CYA_0023 21895 - 21788 - | hypothetical protein CYA_0024 23175 - 22084 - | translation-associated GTPase rumA 24723 - 23329 - | 23S rRNA (uracil-5-)-methyltransferase RumA TERM 15 23977 - 23961 - G 70 -7.9 -4.04206 | TGAGGTTGAGACAAA CCCCCAC CAG GTCGGGG TAGCACTGCATCCAG TERM 16 24876 - 24864 - R 76 -5.5 -4.70169 | CGATACGTAAGAAAA TCCGG CAA CCGAA ACAGAGTAATCCCAG CYA_0026 26074 - 24911 - | O-antigen polymerase family protein TERM 17 25121 - 25096 - G 91 -11.9 -4.28361 | TCAAGGCCAGTAAAA CTCCCAAGAGG ATCT CGTCTTGGGAG CAACGCCAGGCTCGC CYA_0027 26567 - 26202 - | ferredoxin, 2Fe-2S TERM 18 27077 - 27061 - g 72 -7.9 -4.19953 | CATCGAAGTGCAAAA CGGCCAG TAC CTGGGCG AAGACGACATTATCC CYA_0028 26693 - 27145 + | putative mannose-6-phosphate isomerase CYA_0029 29534 - 27153 - | M48B family peptidase TERM 19 27947 - 27929 - G 70 -7.3 -4.05067 | GATCCCACAAAAACA CCCTGCC CACCT GGCTGGG ATCCGCGGCCACCCG CYA_0030 30161 - 29715 - | FUR family transcriptional regulator TERM 20 30780 - 30792 + G 75 -3.3 -4.82901 | GCGAGCCGCTGTTTG TTGCC GAT GGCCA TTTTTATCGGCAAAC CYA_0031 30488 - 30868 + | hypothetical protein CYA_0032 30915 - 32189 + | putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase CYA_0034 32567 - 33220 + | hypothetical protein TERM 21 33208 - 33228 + F 72 -9.8 -3.56727 | opp_overlap 33205 CGCCCCTAGACAGTC CTTTGAGG CATAA CCTCAAAG TTCTGCTTACTTCGG psaL-1 33590 - 34060 + | photosystem I reaction center protein subunit XI psaI 34110 - 34223 + | photosystem I reaction center subunit VIII TERM 22 34250 - 34284 + F 82 -8.5 -4.56597 | opp_overlap 34254 34273, overlap 34251 34252 34254 CTCAATGGGTTTCGG AAGAGGGATCCCTAG CTAGA CAAGGGATCCCTCCC TTTTTGGCACAGCGG TERM 23 34251 - 34283 + F 77 -12 -3.33744 | opp_overlap 34254 34273, overlap 34250 34252 34254 TCAATGGGTTTCGGA AGAGGGATCCCTAG CTAGA CAAGGGATCCCTCC CTTTTTGGCACAGCG TERM 24 34252 - 34282 + F 82 -15.5 -2.60032 | opp_overlap 34254 34273, overlap 34251 34250 34254 CAATGGGTTTCGGAA GAGGGATCCCTAG CTAGA CAAGGGATCCCTC CCTTTTTGGCACAGC TERM 25 34280 - 34254 - f 75 -13 -3.01791 | opp_overlap 34254 34252 34251 34250, overlap 34273 ATGGGTTTCGGAAGA GGGATCCCTAGC TAG ACAAGGGATCCC TCCCTTTTTGGCACA TERM 26 34254 - 34280 + F 71 -12.3 -2.83903 | opp_overlap 34254 34273, overlap 34252 34251 34250 ATGGGTTTCGGAAGA GGGATCCCTAG CTAGA CAAGGGATCCC TCCCTTTTTGGCACA TERM 27 34458 - 34441 - f 71 -4.7 -4.5774 | TACCAACAAGGAAAA GGGCAGC TTGC GCAACCC CCTTTCAACTTTTAA CYA_0037 34557 - 34955 + | ISSoc4, transposase orfA CYA_0038 34937 - 35488 + | ISSoc4, transposase orfB CYA_0039 37047 - 35581 - | hypothetical protein TERM 28 38461 - 38480 + G 76 -5.6 -4.67048 | opp_overlap 38451, overlap 38443 GACCACCACCCGCCT GGGCTGCT TGCT GGTGGCCC TTTCTTTTGGCCTAA CYA_0041 37430 - 38884 + | bacteriochlorophyll delivery (BCD) family transporter CYA_0040 39174 - 38881 - | hypothetical protein TERM 29 39886 - 39943 + G 72 -4 -4.59109 | opp_overlap 39878 39859 39886 GCAGACACTGGAACA GGCCCTGCGCC-AGACCACGGAGCAAGG GCAG CTTTGGTCAGAGGTGGAGGTGC-GGGCC TTTTTGCAAGATGTG TERM 30 40199 - 40251 + G 78 -3.3 -5.09225 | gap 1, overlap 40200 40210 TTTCGCGATCCGTTG ACGG-GAGAGCTGCGCTGGCACGA TCTGGC TCCTACCAGCGCTCCTTTCGCCGC TTTTTTGGATGGCCT TERM 31 40790 - 40810 + G 79 -9.7 -4.13767 | opp_overlap 40775 CTCCTGGTTGCCGGG GGGGATGAC GGC GTCATCCGC TTTTGGGATCCCCAG CYA_0042 39584 - 41692 + | WD domain-/G-beta repeat-containing protein TERM 32 42467 - 42450 - g 71 -5.5 -4.28254 | gap 1, overlap 42451 GTCCAAGAGGGAAAA GTGCGCGG GAT CCGCAC-C GCCGACGGCGAGGAG CYA_0043 41742 - 43040 + | amine oxidase, flavin-containing CYA_0044 43128 - 43799 + | hypothetical protein CYA_0045 43925 - 44719 + | hypothetical protein trmU 45890 - 44778 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase CYA_0047 46711 - 45989 - | HEAT repeat-containing PBS lyase TERM 33 46890 - 46873 - H 74 -3.3 -5.00616 | opp_overlap 46886, overlap 46876 TTGTTGTCGAAAAAA GCAGCTC GATT GAGCCCC ATCCCCAAGATTTTG CYA_0048 46915 - 47829 + | hypothetical protein CYA_0049 48570 - 48013 - | hypothetical protein TERM 34 49457 - 49426 - g 76 -5.7 -4.62069 | opp_overlap 49434, overlap 49408 49427 GCCGGATTTGAAAAA CCCGCAGCAGGGA TCCCCC TTCCTGCGGCGGC TGAACCAACTGCATC CYA_0050 48908 - 49837 + | TPR repeat-containing protein CYA_0051 51004 - 49892 - | oligopeptide ABC transporter, permease protein CYA_0052 51670 - 51170 - | hypothetical protein TERM 35 51335 - 51325 - Gg 83 -4.6 -4.98531 | opp_overlap 51332, overlap 51326 51329 CCTCCAAACTAAAAA GCAG CAC CCGC GCCCGCTGGGCCGGC CYA_0054 50663 - 51715 + | hypothetical protein CYA_0053 52647 - 51700 - | ISSoc4, transposase orfAB selD 53860 - 52802 - | selenide, water dikinase TERM 36 54400 - 54423 + G 78 -10.3 -4.07568 | gap 1 TTACCAGCGGCTGCC TGGCC-GGGG AGGTG CCCCAGGCCA TTTTGCAGGGGCGGC TERM 37 54700 - 54683 - g 91 -3.3 -5.47218 | CCTCACCGAAAAAAA CCGCCTT CGCT ACAGCGG CACAGAGTACTTGAA dnaE 53979 - 57464 + | DNA polymerase III subunit alpha CYA_0056 57725 - 57450 - | glutaredoxin family protein CYA_0058 58562 - 57735 - | carbon-nitrogen family hydrolase TERM 38 58369 - 58400 + g 87 -5.9 -5.1356 | gap 2 GCCAAAAACTCTTCG GCCCG-C-TGCGC AATCTCCG GCGCAAGGCGGGC TTTTTCTTCCTCCGG CYA_0059 58820 - 58599 - | hypothetical protein CYA_0060 59795 - 59052 - | hypothetical protein CYA_0061 60373 - 59792 - | RNA polymerase sigma factor TERM 39 60543 - 60517 - R 79 -12.3 -3.64831 | TGAAGAAGTACAGAA GGCCCAATCCC GAGCT GGAATCGGGCC GAAACAAAACAGCAA CYA_0062 61409 - 60603 - | putative lipoprotein CYA_0063 61668 - 61552 - | hypothetical protein CYA_0064 62496 - 61714 - | hypothetical protein TERM 40 61805 - 61763 - G 76 -7.5 -4.31835 | overlap 61779 AAGCGCCAGAACAAA TGGGATCCCCACAGCAGCC CCGCC GCCAGCAGGGCGGATCCCA CAAGCCAGGGCCACT TERM 41 61908 - 61894 - G 72 -4.2 -4.67173 | GAAGGTAAAAAACAA CCGATA GGC CACCGG ATAGGCCACCAGCGG TERM 42 62225 - 62207 - G 72 -2.4 -4.70583 | overlap 62209 TTGAGCAACACAAAA TCCAGG GTGCCTT CCTGAA CTTGTTGCACGATGC CYA_0065 63257 - 62514 - | hypothetical protein CYA_0066 63791 - 63306 - | FHA domain-containing protein TERM 43 64920 - 64952 + H 89 -8.5 -5.00616 | gap 1 GCCGGGGCAGTTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGGGG CYA_0068 65283 - 65759 + | ISSoc3, orfA transposase CYA_0069 66081 - 66722 + | hypothetical protein TERM 44 67032 - 67063 + G 85 -3 -5.3104 | gap 1, overlap 67034 GCGCCCAAGGGAACC TTCAGCGGTACTG TGGCCAT CCGT-CCGCTGGA TTTTATTTTTCATCG CYA_0070 66762 - 67652 + | hypothetical protein TERM 45 68432 - 68443 + F 91 -7.2 -5.29445 | opp_overlap 68431 CCTGGACAAGCAGAC GGGG CGGA CCCC TTTTTATTGTTCCCA chlP 68588 - 69808 + | geranylgeranyl reductase CYA_0073 70660 - 69815 - | hypothetical protein TERM 46 69842 - 69861 + g 70 -7.8 -4.08216 | GAAGGTGACGGTGAC CCGATCCC AATT GGCATCGG TTTTCAGAACCCTAG TERM 47 71868 - 71882 + G 71 -4.9 -4.44797 | overlap 71852 71848 TCTATGCTGGCATTG CCGGC CTGGT GCTGG TTTTCGTCTTCATGG secD 71021 - 72367 + | preprotein translocase subunit SecD TERM 48 73178 - 73189 + G 76 -5.8 -4.56597 | CGATGCTGCCCCTGG TGGC CATT GCCA TTTTTGGGGGAGCCA secF 72364 - 73359 + | preprotein translocase subunit SecF CYA_0076 75167 - 73398 - | hypothetical protein TERM 49 75727 - 75705 - H 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG TERM 50 76961 - 76932 - g 70 -7.7 -4.09243 | CAGACTGCGGGAAAA CGGCGCTGGGCCA TCCT CGGCCCAATGCGG GAACTGGGAGAGCAT TERM 51 77201 - 77216 + G 74 -5.4 -4.59853 | gap 1, overlap 77197 77204 AGCCGTCGAGCTGGA GCGGGTG CTG CACC-GC TTTTTGCAGGCTTGG murF 75903 - 77240 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CYA_0078 77338 - 77559 + | hypothetical protein TERM 52 78115 - 78150 + G 81 -10.4 -4.18018 | overlap 78116 TGGAAGCTGCCGACT TGGTGAAGGTGCTCTC CGGG GAAGGCCCCTTCACCG TTTTCGCTCCCACCG CYA_0079 77913 - 78449 + | fasciclin domain-containing protein TERM 53 78493 - 78516 + T 88 -13.8 -3.75153 | GGGGGGTCTAGTCCG GCCCCTGCCC TCAG GGGTGGGGGC TTTGCGTTGCAACCC CYA_0080 79003 - 78557 - | hypothetical protein TERM 54 79305 - 79315 + Gr 83 -4.6 -5.0538 | CAGCGGTGGACGAGC GGTC GGC GGCC TTTTTTGCCCTCGGC miaA 81851 - 80829 - | tRNA delta(2)-isopentenylpyrophosphate transferase menD 79112 - 80905 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 55 81121 - 81133 + gF 93 -9.1 -4.68593 | overlap 81110 AGGTCTGGGCCGTAG CGCTG CCG CAGCG TTTTTACCTCCTCAA CYA_0083 82003 - 82824 + | hypothetical protein rpe 83692 - 82982 - | ribulose-phosphate 3-epimerase CYA_0085 84037 - 83852 - | hypothetical protein TERM 56 84493 - 84473 - g 85 -14.7 -3.54424 | CTGGAGGCGGTGAAA GCCCGCCTG CTG CAGGCAGGC TATGAGGTGCAGCCC CYA_0086 84185 - 84595 + | glyoxalase family protein CYA_0088 84592 - 86178 + | carbohydrate kinase family protein TERM 57 86209 - 86190 - T 73 -5.6 -4.59853 | overlap 86179 86191 TTAAGGTTGCAAAAA CCCCAGGG CCAG CCCCAGGA AAATGAACAGGCCAA CYA_0087 87005 - 86175 - | putative undecaprenol kinase TERM 58 86332 - 86313 - G 71 -5.6 -4.29304 | overlap 86309 GTAGGAGAAGACAAA GGCCGAGA GCGT CCCCAGCC CCTGCGACAGCAGCG TERM 59 87149 - 87139 - R 73 -8.2 -4.07568 | CCCTGTCTCTGAAAA GGGC TAC GCCC GAAACCCCCTGTTCA CYA_0089 87829 - 87209 - | hypothetical protein CYA_0090 88187 - 88002 - | hypothetical protein CYA_0091 89487 - 88306 - | ISSoc1, transposase CYA_0092 90367 - 89675 - | hypothetical protein CYA_0093 91023 - 90367 - | response regulator TERM 60 91405 - 91428 + G 72 -2.4 -4.8048 | gap 1, overlap 91397 TTTGGAGCTGATGCT CTCTGT-GCTC AGG GAGCTGCAAAG TTTTTCCTCTGGGAA CYA_0094 91262 - 92380 + | UbiE/COQ5 family methlytransferase CYA_0095 92497 - 92991 + | hypothetical protein TERM 61 93208 - 93232 + G 72 -2.1 -4.68908 | gap 1, opp_overlap 93209, overlap 93209 AGCGTCGCCGACACT ACGA-GGAGC ACCATC GCTCCATCGA TTTCTTTTGGGTGCC CYA_0096 93105 - 93449 + | hypothetical protein CYA_0097 93643 - 95199 + | major facilitator transporter CYA_0098 95249 - 95350 + | hypothetical protein CYA_0099 95382 - 96572 + | glycosyl transferase, group 1 CYA_0100 96917 - 98413 + | GAF/SpoIIE domain-containing protein TERM 62 98653 - 98669 + G 76 -7.9 -4.26076 | CAACTTCGTGGAATC GGGCCAA ATT TGGGCCC TTTTGATAGGGATCG CYA_0102 98507 - 98725 + | hypothetical protein CYA_0101 98816 - 98709 - | hypothetical protein TERM 63 99106 - 99084 - g 74 -12 -3.40299 | opp_overlap 99090, overlap 99088 GGAGCAGATCGAGAA GGAAGTTGCC GAG GGCATCTTCC AGCCTGACCCTGAGG TERM 64 99261 - 99292 + G 73 -3.6 -4.68103 | gap 1, overlap 99239 99263 GGATGAAATCGACAC CATCCGGCAGGCTCT CTG GGAG-CTGCGGGGGG TTTTGTTGGACTTGG argH 98857 - 100326 + | argininosuccinate lyase CYA_0104 100418 - 101038 + | hypothetical protein TERM 65 101216 - 101248 + F 72 -9.7 -3.67296 | overlap 101218 CAGGTCGCACTTTTT CTGCTGCTGTGGGCG CTT CGCTGGCAGCGGCTG TTTGCATGGCTCATG TERM 66 101218 - 101246 + F 72 -10.9 -3.41569 | overlap 101216 GGTCGCACTTTTTCT GCTGCTGTGGGCG CTT CGCTGGCAGCGGC TGTTTGCATGGCTCA CYA_0105 101454 - 101705 + | hypothetical protein TERM 67 102237 - 102250 + G 72 -3.7 -4.56775 | ACCACCGCCTTTGCC GCTGC CCTG GCTGC TTTTTACCAACGCAT CYA_0107 101922 - 103049 + | UDP-N-acetylglucosamine 2-epimerase CYA_0106 103166 - 103038 - | hypothetical protein CYA_0108 103701 - 103453 - | hypothetical protein ftsZ 104219 - 105340 + | cell division protein FtsZ TERM 68 106005 - 106023 + G 72 -3.9 -4.66833 | gap 1, opp_overlap 106008, overlap 106008 TCCCGGCCATTGAGA TCATCCCT GCCC AGGGA-GA TTTTTACGATTACGA ddlB 105410 - 106381 + | D-alanine--D-alanine ligase B CYA_0111 106871 - 106401 - | hypothetical protein chlM 107039 - 107704 + | Mg-protoporphyrin IX methyl transferase CYA_0113 108475 - 107756 - | HEAT repeat-containing PBS lyase TERM 69 108597 - 108571 - R 79 -7.3 -4.62872 | ATGAAGGCGGAAAAA GCAGCCAAG CAAGCAAAT CCTGGCTGC AGCCCATCATAAGCC CYA_0114 109369 - 108623 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-type CYA_0115 110236 - 109442 - | hypothetical protein CYA_0116 111221 - 110298 - | hypothetical protein CYA_0117 111443 - 113350 + | endonuclease/exonuclease/phosphatase family protein TERM 70 113391 - 113418 + T 100 -12 -4.7261 | CTTCGATGGGCAGGA GCTGGGGGAGCG GCTT TGCTTCTCCAGC TTTCTTTTGCTCGCT cbiD 114609 - 113491 - | cobalt-precorrin-6A synthase CYA_0119 114833 - 115186 + | hypothetical protein def 115784 - 115188 - | peptide deformylase CYA_0121 116555 - 116244 - | hypothetical protein CYA_0122 116885 - 116559 - | hypothetical protein CYA_0123 117061 - 116885 - | phycobilisome degradation family protein CYA_0124 117344 - 117159 - | hypothetical protein CYA_0125 117441 - 117692 + | putative RNA-binding protein CYA_0126 117811 - 119115 + | putative nuclease SbcCD, D subunit TERM 71 119294 - 119319 + F 77 -8.3 -4.26881 | opp_overlap 119294 CAGGGAACTAACCTA GGCTGGCAG ATCTCACC CTGCCAGTC TTTCCTTTTGTAGAG CYA_0127 119457 - 119702 + | hypothetical protein TERM 72 119867 - 119850 - T 78 -4.7 -4.91109 | overlap 119852 CTGTCATTAGAAAAA GGGGGCC ATAG AGCCCAC CCCTTCCGTGACCTA speA 121887 - 119962 - | arginine decarboxylase TERM 73 123185 - 123202 + G 76 -7.7 -4.37886 | gap 1, opp_overlap 123178 GAGCGAAATCGAGCT GCCCGACA ACC TG-CGGGC TTTTGTGCCCGATCC pstS-1 122379 - 123428 + | phosphate ABC transporter, phosphate-binding protein dnaK-1 123678 - 125564 + | molecular chaperone DnaK TERM 74 125604 - 125571 - f 77 -11.7 -3.57128 | gap 1, opp_overlap 125570 125594, overlap 125572 AGCAAGTAACGACAA TGGGATCC-CCCTGGG GCC CGCAGGGCGGATCCCG CCTTTGTCTGGAGCA TERM 75 125603 - 125572 - f 81 -15.2 -2.73554 | gap 1, opp_overlap 125570 125594, overlap 125571 GCAAGTAACGACAAT GGGATCC-CCCTGGG GCC CGCAGGGCGGATCCC GCCTTTGTCTGGAGC TERM 76 125594 - 125606 + F 81 -10.5 -4.0371 | opp_overlap 125572 125571, overlap 125570 CCCTGGGGCCCGCAG GGCGG ATC CCGCC TTTGTCTGGAGCATC TERM 77 125629 - 125670 + F 71 -9.3 -3.73042 | overlap 125633 GGAGCATCGATAATG GGGAGGGACGGGATGGGCG ATAG CGTCTAGCCCGCCTCTTTC TCTTTTCGTCAACAG TERM 78 125633 - 125666 + F 81 -8.7 -4.48449 | overlap 125629 CATCGATAATGGGGA GGGACGGGATGGGCG ATAG CGTCTAGCCCGCCTC TTTCTCTTTTCGTCA CYA_0132 125763 - 126731 + | DnaJ family protein CYA_0131 128053 - 126728 - | putative glycolate oxidase, iron-sulfur subunit CYA_0134 128274 - 128594 + | hypothetical protein CYA_0133 130471 - 128591 - | long-chain-fatty-acid-CoA ligase-like protein TERM 79 129248 - 129260 + g 71 -9.1 -3.78934 | CAAGGGGGGGCCCGC CGTGC CGC GCACG TTGTTGTCAGGACGC TERM 80 129966 - 129988 + g 74 -5.4 -4.57073 | overlap 129958 CGCTCCAGCCGCGGC GGCTCGTAGC GGC GCTCCCGGCC TTTTTGCAGCCACTG TERM 81 130594 - 130561 - R 75 -9.5 -3.737 | overlap 130562 130566 130588 130589 CAATCTGTCACCAAA TCCAACCCCTTCCCC TTGC GGGGAAAAGGTAGGG ATCAACCCTACTCCC TERM 82 130593 - 130562 - R 74 -13 -2.83899 | overlap 130561 130566 130588 130589 AATCTGTCACCAAAT CCAACCCCTTCCCC TTGC GGGGAAAAGGTAGG GATCAACCCTACTCC TERM 83 130589 - 130566 - R 74 -11 -3.30701 | overlap 130562 130561 130588 TGTCACCAAATCCAA CCCCTTCCCC TTGC GGGGAAAAGG TAGGGATCAACCCTA cas2-1 131179 - 130865 - | CRISPR-associated Cas2 family protein CYA_0137 133147 - 131558 - | hypothetical protein TERM 84 132263 - 132253 - G 76 -6.8 -4.43012 | AGGCCAAGATTAAAA GCTG TTT CAGC TCCTGATCCGTGAGG TERM 85 132884 - 132874 - G 77 -2.4 -5.00616 | overlap 132875 CCTGTGGCGAAAAAA GCCG CGT CGCC GTCAGGTAAAGCAAC TERM 86 133095 - 133067 - G 71 -10.9 -3.53444 | overlap 133083 133086 GTAGGCTTCGTCAAA GCCCGGTGGCAAC AGA GCAGCCACCAAGC AGCGCAGAAGCAGGC CYA_0138 134361 - 134068 - | hypothetical protein TERM 87 134521 - 134501 - R 87 -15.5 -3.28889 | opp_overlap 134499 134512, overlap 134499 AGATAGTAAGCAAGA CCTTGAGGC TTT GCCTCAAGG AACTATCTAGAGGCA TERM 88 134603 - 134581 - R 86 -11.3 -4.09739 | gap 1, opp_overlap 134573 TGAACTGCGTCAAAA TCCC-CCGCC TTTA GGCGGTGGGA GTGTCAAGTTCGTGG CYA_0139 135246 - 134674 - | hypothetical protein CYA_0140 135906 - 135265 - | hypothetical protein TERM 89 135949 - 135971 + r 77 -11.3 -3.62597 | gap 1 GGAGGAAGTTGACAC TCCCACCGCC TAAA GGCGG-GGGA TTCTTACGCAGTCCA CYA_0142 137164 - 136943 - | CAB/ELIP/HLIP family protein ilvA 138777 - 137266 - | threonine dehydratase CYA_0144 138937 - 139419 + | pyridoxamine 5'-phosphate oxidase family protein CYA_0145 140352 - 139456 - | alpha/beta fold family hydrolase TERM 90 140103 - 140117 + g 73 -11.4 -3.56643 | opp_overlap 140096 GCCCAAAATCGGCCA CCTGGG CGC CCCAGG TTTCAAAGGTGTAGG TERM 91 140168 - 140138 - G 70 -10.5 -3.60475 | gap 1 AAGGTGTAGGGGAAA GGGGATCCCGGCAA GGGC TTGGC-GGATCCCC CAAATCCCAGGAGGT CYA_0146 140472 - 141203 + | WecB/TagA/CpsF family glycosyl transferase TERM 92 141343 - 141321 - f 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG TERM 93 141968 - 142005 + G 83 -7.5 -4.59109 | overlap 141998 CTACCGCATCCCGCC CCGCCCCCTAGCAATGT TGCG GCGGCGCTTGGGGGTGG TTTTTCAAGACTATC ftsE 141729 - 142415 + | cell division ATP-binding protein FtsE metE-1 144856 - 142592 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 94 145716 - 145727 + H 72 -3.6 -4.72272 | overlap 145711 TGTCCAGGAGGCAAG GGGG TTTG CTCC TTTTTGCTGAAAAAG CYA_0149 145761 - 147386 + | peptide/opine/nickel ABC transporter substrate-binding protein CYA_0150 147371 - 148372 + | peptide/opine/nickel ABC transporter permease CYA_0151 148369 - 149262 + | peptide/opine/nickel ABC transporter permease TERM 95 150061 - 150087 + G 71 -5 -4.42806 | opp_overlap 150058, overlap 150064 GCCGGGCAACCAGCC TGACCCTGAGGC ACT GCCTGCGGGTTG TTTGTTTGGGGATCG TERM 96 150064 - 150084 + G 73 -6.7 -4.32678 | opp_overlap 150058, overlap 150061 GGGCAACCAGCCTGA CCCTGAGGC ACT GCCTGCGGG TTGTTTGTTTGGGGA CYA_0152 149267 - 150196 + | peptide/opine/nickel uptake ABC transporter ATP-binding protein CYA_0153 150183 - 150857 + | peptide/opine/nickel uptake ABC transporter ATP-binding protein TERM 97 151045 - 151069 + G 73 -2.8 -4.72986 | overlap 151039 151036 151047 151048 151051 GCTGAACTGGGCTGC TATCAGCACC CTGTT GGTGTTGCTG TTTTTGGTCGGGATC CYA_0154 150950 - 151867 + | putative permease CYA_0155 151961 - 152200 + | DNA-directed RNA polymerase subunit omega CYA_0156 152861 - 152388 - | ISSoc3, orfA transposase TERM 98 153224 - 153192 - gR 93 -8.5 -5.00616 | gap 1, opp_overlap 153191 CCTCGCTTCAAAAAA GCGGGGGAGT-TGA GATCCT TCACATTCCCCCGC ATCAATTGCCCCAAG CYA_0158 152817 - 154088 + | ISSoc3, orfB transposase CYA_0157 154842 - 154078 - | small conductance mechanosensitive ion channel (MscS) family protein TERM 99 154416 - 154432 + g 73 -6.5 -4.2558 | overlap 154417 GCTCGGTAATGCGGA TGGCCTG TTC CAGGTCG TTTTCGTAGGCGATC cax 156000 - 154882 - | calcium/proton exchanger TERM 100 155743 - 155692 - G 95 -10.1 -4.57341 | opp_overlap 155709 AATGCCGCCCAAAAA CATGGCCAGCCCGGCCACCAGCA GCAGGT TGCTGATGATCGAGCCGGTGATG GAGGCTTTCACCACC CYA_0160 156946 - 156188 - | hypothetical protein coaBC 158224 - 157001 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase CYA_0162 158574 - 158942 + | hypothetical protein CYA_0163 159202 - 159990 + | hypothetical protein TERM 101 161036 - 161001 - gT 86 -4.6 -5.14563 | TTTGCGAGCAAAAAA TGGGCAACAAGGCC TCGATCCT GGCCCTGCAGCGCA AGCTCACCCGTCTCG CYA_0165 159947 - 161716 + | hypothetical protein ubiH 162930 - 161686 - | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 102 161772 - 161758 - G 81 -7 -4.72986 | overlap 161759 CAGGCGCAGCAAAAA GCGCCG CAG CGGCGG AAAGCGTATCATCCC CYA_0166 163925 - 162933 - | cyclopropane-fatty-acyl-phospholipid synthase family protein metE-2 166383 - 164140 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 103 165054 - 165067 + g 81 -3.7 -4.98255 | CTTCGTATTCGGCCT GGGAG ATCT CGCCC TTTTTGTACTTGACC moaE 167602 - 167117 - | molybdopterin converting factor, subunit 2 CYA_0170 167866 - 167603 - | putative molybdopterin converting factor, subunit 1 moaC 168935 - 167841 - | molybdenum cofactor biosynthesis protein C moaA 169878 - 168940 - | molybdenum cofactor biosynthesis protein A moeA 171043 - 169880 - | molybdopterin biosynthesis protein MoeA TERM 104 170866 - 170843 - G 71 -8.2 -3.92324 | gap 1, opp_overlap 170823, overlap 170838 GCCTGCAACAGCAAA GCTT-CGCTGC CCA GCAGCATAAGC GGCATAGTTGATGGC CYA_0174 171494 - 171021 - | hypothetical protein TERM 105 172647 - 172637 - H 73 -8.2 -4.18197 | ACCTGTTAGCGAAAA GGGC CCT GCCC CTGCAAACCCTATCT TERM 106 173137 - 173121 - H 77 -2.9 -5.14563 | overlap 173123 GTGCCGATCAAAAAA GCCAGCT CGC AGCTATC GAGATCCGTGTAGCT TERM 107 173750 - 173763 + H 70 -3.1 -4.77438 | TGACCTGGAACTTTT GTAGC TTGC GTTAC TTTTTGCTCCTCACT CYA_0177 174066 - 174407 + | pilin domain-containing protein TERM 108 174909 - 174922 + G 72 -3.7 -4.59773 | GGGCCTGTGCCCGCG GCGGG GTAA CCAGC TTTTTGGAGATGCCC pyrC 174653 - 175975 + | dihydroorotase CYA_0179 176347 - 176748 + | hypothetical protein clpB 179400 - 176758 - | ATP-dependent chaperone protein ClpB TERM 109 177152 - 177164 + g 83 -9.1 -4.37502 | TGGTGCCGCAGCATG GCCAG CAC CTGGC TTTTCATCTCCTCGT TERM 110 178401 - 178419 + g 75 -4.4 -4.72333 | opp_overlap 178389 178387, overlap 178399 178400 ACACCGGCTGGAAGC GGCGCTCC AGG GCGGCGTC TTTTTCGATGTGCTT TERM 111 178910 - 178936 + g 83 -6.4 -4.87665 | TCGCGGCCATAGCGC TCCAGGGCCTCG TAG CGGGACTCGGGA TTTTTGTCGGTAACC zam 181878 - 179593 - | acetazolamide conferring resistance protein Zam TERM 112 181677 - 181640 - G 83 -4.7 -4.99134 | overlap 181633 181641 ACGGCAAAGCAAAAA CCCTTGCTGGAACAGCG CAAA CGCCCCACCACCAAGGA TTCATCCGGCTTACG phoU 182577 - 181936 - | phosphate transport system regulatory protein PhoU CYA_0183 182785 - 184113 + | hypothetical protein TERM 113 184218 - 184236 + G 72 -12.4 -3.29511 | CAACGGTGTTGCCTC CGGCGGTG GTG CACCGCTG TTCTGAGCGCCTGGG TERM 114 185310 - 185299 - g 74 -2.2 -4.82901 | TTTGGCGGAGAAAAA CTGG GATC CCAA CAGCATTAACCGCTT CYA_0185 184130 - 185644 + | oxidoreductase, FAD-binding treZ 187449 - 185641 - | malto-oligosyltrehalose trehalohydrolase TERM 115 185684 - 185701 + g 77 -2.7 -5.00616 | gap 1, overlap 185685 CCATAGGGCGGTATC TCAACGGG CTC CCC-TTGG TTTTTTGCCGGCAGG TERM 116 187585 - 187598 + r 71 -6.7 -4.22883 | CGGAAAAGCCCTTGA GCAAC TTTA GTTGC TTCTTTTAGCTAGTA TERM 117 187724 - 187704 - R 72 -9.8 -3.56727 | opp_overlap 187701 CCGAAGTAAGCAGAA CTTTGAGG TTATG CCTCAAAG AACTGTCTAGGGGTG CYA_0186 187861 - 187712 - | hypothetical protein CYA_0187 187888 - 188067 + | hypothetical protein rpsU 188315 - 188130 - | 30S ribosomal protein S21 CYA_0189 189658 - 188402 - | trypsin domain-containing lipoprotein TERM 118 189161 - 189134 - G 74 -4.8 -4.58395 | overlap 189137 189154 TCGAGGGTCGAAAAA GCAGTGGGCG GCGGTAAG CACCCACTCC GGGGCAATCAGGGAT CYA_0192 190539 - 190877 + | hypothetical protein TERM 119 191408 - 191395 - g 72 -2.3 -4.67607 | overlap 191396 TGGCCAACAAAGAAA CCCTG GTGG CAGGC GGCCCGGTGGTGCTG TERM 120 191691 - 191669 - g 71 -9.1 -3.72324 | CACCCTGATGAACAA GGGCCTGGA GGTGA TCGAGGCCC ACTGGCTGTTTGGTT TERM 121 192009 - 192041 + G 74 -5.4 -4.60041 | overlap 191990 GCCGCCAACGAAGCG GCGGTGGCCCTCTT CCTAC AGGAGCGCATCCGC TTTTTGGACATCCCT dxr 191016 - 192194 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CYA_0194 192254 - 194020 + | heavy metal ABC transporter (HMT) family permease/ATP-binding protein murE 194111 - 195700 + | UDP-N-acetylmuramyl-tripeptide synthetase carA 196884 - 195697 - | carbamoyl phosphate synthase small subunit TERM 122 195894 - 195910 + g 72 -7.9 -4.21908 | opp_overlap 195887 GGAGCGAAGCGGCCT CCACCGC AAA GCCGTGG TTTTGGCTGGTGATC TERM 123 196930 - 196904 - R 79 -12.2 -3.551 | overlap 196905 TGTGAACCTAGACAA CCCCCCTCTCCC AAA GGGAGAGGGGCT GGGGGTGAGGGCAAT TERM 124 196929 - 196905 - R 82 -15.7 -2.72739 | overlap 196904 GTGAACCTAGACAAC CCCCCTCTCCC AAA GGGAGAGGGGC TGGGGGTGAGGGCAA CYA_0197 197532 - 196981 - | putative pilin CYA_0198 198674 - 197547 - | PddD domain-containing protein TERM 125 197679 - 197666 - G 76 -8.1 -4.19817 | TGTAGCGACGGAAAA GGCCA GGGT TGGCC CGCTCCATGGCCGTG TERM 126 198030 - 198018 - G 78 -10.5 -4.06687 | opp_overlap 198019 198020 198022 ATCTTCGACAAAGAA CGGGC TGC GCCCG GCGCAGTCGTTGTTC CYA_0199 199495 - 198731 - | prepilin-type N-terminal cleavage/methylation domain-containing protein CYA_0200 206794 - 199553 - | hypothetical protein TERM 127 200381 - 200408 + g 81 -4 -5.06414 | overlap 200396 GTCCGCGTACTTGGA TGCGGGGGTGTA ACCC TGCGCCGCAGCA TTTTTGTTGACGCGG TERM 128 202962 - 202921 - G 71 -9.3 -3.71649 | gap 1, overlap 202914 TGCCCAAAGCCGAAA TGCGGGTGC-CGAAGTTGGC ATA GCCCACATCGGGTGCCCGCA AGGGCCGCACTGCCG TERM 129 203468 - 203480 + g 74 -6.2 -4.43477 | overlap 203456 CGCCCGGGCAAAGCG CCGG TCTTC CCGG TTTTCATTGGGTCCG TERM 130 206338 - 206306 - G 86 -7.6 -4.72272 | gap 1, opp_overlap 206320 206320 206329 206330, overlap 206309 GGTGTCCACCAAAAA CCACCAG-GCCGGCG CCCG CACCGGCACGGGCAG GGTTTGCCCGGGGTT CYA_0201 207511 - 206915 - | DNA-binding response regulator CYA_0202 208199 - 207609 - | pentapeptide repeat-containing protein TERM 131 207743 - 207715 - G 85 -5.8 -5.00616 | overlap 207717 GCTGCTTCCAAAAAA GCGCCGCGCAGG TCGGC CCCGCGCAGATC GGCCTGGCGCAGGTT mutM 209162 - 208311 - | formamidopyrimidine-DNA glycosylase TERM 132 208753 - 208731 - G 70 -7.6 -4.08394 | overlap 208719 208742 ATAGGCCTCGGAAAA GGCCGGCG AAAGCGG CTCCGGCC CCAAGCTCTGCAGGG psaE 209429 - 209208 - | photosystem I reaction center subunit IV CYA_0205 209709 - 209861 + | CAB/ELIP/HLIP family protein TERM 133 209932 - 209965 + T 93 -5.4 -5.5074 | gap 2 TGGGATCCCTGTGAG CAGAGAG-GCA-AGCT TGAA AGCCCTGCTCTCTCTG TTTTTTGTTGAGTTG TERM 134 209999 - 210020 + T 75 -13.7 -2.70932 | AAAAGCTTTGTTCTG GGGTCTGCC GGCC GGCAGGCCC TCATTCACAGAAAAC nadE 211803 - 210133 - | NAD+ synthetase uvrC 213749 - 211884 - | excinuclease ABC subunit C TERM 135 212693 - 212721 + g 82 -5.9 -4.87665 | overlap 212695 212695 CTTTGCTCTGCCGCT GCGGGGCAAGG AGGCTGA CCTTGCGCCCC TTTTTCTGGCTCAGC TERM 136 214016 - 214042 + r 71 -4.3 -4.55118 | overlap 214018 AACGCTCCCACCGGG CACTTCCCCCT GGAGA AGGGGGAGAGG TTTTCTGTCAAGTTG CYA_0208 216415 - 214082 - | 1A family penicillin-binding protein CYA_0209 218263 - 216419 - | serine/threonine protein kinase CYA_0210 218337 - 218206 - | hypothetical protein CYA_0211 218392 - 219309 + | histone deacetylase family protein CYA_0212 220040 - 219321 - | protein phosphatase 2C family protein TERM 137 219767 - 219777 + g 84 -8.2 -4.44245 | TGGTGCCCATGTCGG CCCG CTC CGGG TTTTCTCGCTGGTCT CYA_0213 221776 - 220040 - | hypothetical protein TERM 138 220190 - 220179 - G 100 -4.4 -5.60993 | GCGCTGAGAAAAAAA GTTG CAAA CAAC ACCGCGTAGATAACT TERM 139 221530 - 221492 - G 90 -8.9 -4.82901 | opp_overlap 221480, overlap 221514 CCGGGTGGAGAAAAA CTGCCCCACCTTGAT AAAAGTAGG ACCGAGGTGGAGCAG CGTCTCGCGGATCCA CYA_0214 222084 - 221773 - | hypothetical protein cpcG1 222949 - 222224 - | phycobilisome rod-core linker polypeptide cpcG1 TERM 140 222742 - 222760 + g 78 -6.7 -4.60041 | gap 1, overlap 222745 AGATCGCCCCGTTGC GCAGCTGG GACT CCAGC-GC TTTTTGCCGGTAGCT cpcF 223708 - 222992 - | phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit cpcE-1 224473 - 223721 - | phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit TERM 141 224060 - 224040 - G 76 -8.9 -4.15044 | GGGTGGCTTAAGAAA GGCCGAATC GCC GCCTCGGCC TCGGTGGCGTTGAGC cpcD 224824 - 224564 - | phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod TERM 142 224950 - 224940 - R 70 -5.4 -4.431 | TACCCAGGCACAAAA GCTT GGG AAGC AGGCAGACAACCTAG CYA_0219 225054 - 224962 - | hypothetical protein cpcA-1 225601 - 225113 - | phycocyanin, alpha subunit TERM 143 225758 - 225770 + r 70 -10.5 -3.31461 | opp_overlap 225758 225757 225754 TTTAACTTAAACAAT GGCGG CAG CCGCC TTGTCGAAGTAGCTG cpcB-1 226267 - 225749 - | phycocyanin, beta subunit TERM 144 226229 - 226217 - G 73 -3.3 -4.68593 | overlap 226218 226221 TTGATCACTTAAAAA GGCAC CGC GTGCA TCTGCCTGAGCGATC CYA_0222 226300 - 226515 + | hypothetical protein TERM 145 226548 - 226531 - T 73 -5.5 -4.58085 | opp_overlap 226533 AGATTTACAAATAAA CAGGCAC CAGA GTGTCTG CTTGGCCGCCAATCC TERM 146 226666 - 226652 - T 79 -10 -4.03234 | TTGTTTTGAGATAAA GGCAAG CCT CTTGCC CACACACTGCAGCAG trpA-1 227497 - 226682 - | tryptophan synthase subunit alpha TERM 147 227143 - 227129 - G 73 -12.8 -3.21099 | GTCGGGGACGACCAA GCCGGC ACA GCCGGC CTGGCGCAGTTGCCG CYA_0224 228951 - 227551 - | hydrophobic amino acid uptake ABC transporter amino acid-binding protein TERM 148 227953 - 227994 + g 76 -5.5 -4.56597 | opp_overlap 227926 227931 227928, overlap 227955 227976 CCCCACCAGGGCGAG GGGCTGGCCAAGGGCAGCG TTCT CGCGGGCAACGGCCAGCGC TTTTTCGGCCACGGA CYA_0225 229282 - 229067 - | hypothetical protein CYA_0226 230522 - 229317 - | ISSoc7, transposase TERM 149 229714 - 229680 - G 79 -9.3 -4.17089 | opp_overlap 229681 229703, overlap 229681 CCGAAACTCGTAAAA GCCACAATCTGACAG CGCTC CTGCCAGCTTGTGGT TCTTAAGCAGGTTCT TERM 150 229713 - 229681 - G 71 -12.8 -3.09772 | opp_overlap 229681 229703, overlap 229680 CGAAACTCGTAAAAG CCACAATCTGACAG CGCTC CTGCCAGCTTGTGG TTCTTAAGCAGGTTC TERM 151 229681 - 229713 + g 70 -10.6 -3.62522 | opp_overlap 229681 229680, overlap 229703 CGAAACTCGTAAAAG CCACAATCTGACAG CGCTC CTGCCAGCTTGTGG TTCTTAAGCAGGTTC TERM 152 230310 - 230328 + g 78 -3 -5.09762 | overlap 230311 230312 AGGAGCGCATTTGGA GACCTGGT AGT ACCAGGGA TTTTCTTTCTTCACC CYA_0227 230628 - 231440 + | hypothetical protein CYA_0228 231828 - 231451 - | polar amino acid ABC transporter ATP-binding protein TERM 153 232165 - 232187 + H 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC CYA_0229 232277 - 232387 + | hypothetical protein gvpG 232464 - 232709 + | gas vesicle protein G CYA_0231 232782 - 233399 + | hypothetical protein TERM 154 233493 - 233522 + F 79 -3.6 -5.06414 | gap 1, overlap 233496 233497 CCAATGCAGCCCCTT GGTTGCCGCTCAA GTCGA TTGGGCGG-AGTC TTTTTGTTGCCAGCG TERM 155 234581 - 234564 - g 81 -4.1 -5.00616 | gap 1 GCCCTGCTGAAAAAA CTCC-GCC AGC GGCAAGAG CACTTCGAGAGGATG TERM 156 234762 - 234749 - g 77 -4.5 -4.84359 | GGATCCGGAGAAAAA CGCTG TTCT CAACG CCCAGGCCTACTACC TERM 157 234813 - 234798 - g 85 -3.2 -5.28942 | gap 1, overlap 234801 CACCGCAAACAAAAA CGAGCCC AGG AGGC-CG TCCAGCCCTTGCTAG CYA_0233 233619 - 235439 + | fibronectin-binding protein CYA_0232 236730 - 235426 - | peptidase inhibitor CYA_0234 236956 - 237525 + | hypothetical protein CYA_0235 237766 - 239034 + | bifunctional sterol desaturase/short chain dehydrogenase CYA_0236 239220 - 240008 + | putative lipoprotein TERM 158 240501 - 240466 - gf 86 -18.2 -2.70932 | opp_overlap 240464 240463 CGGCCCCCCCAACCA GCCCCCCAGCCCCCCG TATA CGGGGGGCTGGGACGA AACTTCTGCTTTTGC thyX 240083 - 240940 + | thymidylate synthase, flavin-dependent CYA_0238 240856 - 241740 + | hypothetical protein CYA_0239 241889 - 243349 + | sugar transferase family protein purC 243360 - 244130 + | phosphoribosylaminoimidazole-succinocarboxamide synthase CYA_0241 244138 - 245547 + | hypothetical protein CYA_0242 245744 - 246574 + | hypothetical protein TERM 159 246596 - 246616 + T 83 -9 -4.65916 | gap 1, overlap 246596 GTGAAATTTGCCTTA GGGGGG-AC TTCC GTGCCCCCC TTTTCTTCAACTCCC hemC 247608 - 246676 - | porphobilinogen deaminase TERM 160 246717 - 246729 + g 74 -6.2 -4.4595 | opp_overlap 246700 CCTGCAAAATCTCGT CGGC CCCCT GCCG TTTTAGCTTTTCTGC CYA_0244 247938 - 248399 + | hypothetical protein TERM 161 249706 - 249730 + G 77 -4.2 -4.84527 | CCGCCGCCTGGGCAT GGCCAAGACA GTCGA TCTCTGGGCC TTTTTCATCTCTCAG CYA_0245 248588 - 250033 + | glycosyl transferase, group 2 family protein TERM 162 250535 - 250556 + G 76 -10.1 -3.91196 | GCGCACTTACCTAGA GGGGCAGGG GGTG CCCTGTCTC TTTGCTGTCTATCAG ilvC 250107 - 251099 + | ketol-acid reductoisomerase serS 251123 - 252430 + | seryl-tRNA synthetase CYA_0248 252522 - 252956 + | BlaI/MecI/CopY family transcriptional regulator TERM 163 253043 - 253087 + G 73 -2.8 -4.77438 | overlap 253030 253026 GCTGGTTCCTGGGCC CAGCGCTGGCAGTGGG CCTGGATCCACTT CTTGCTGCCGCCGCTG TTTTTGCTAATGACT CYA_0249 252953 - 253825 + | hypothetical protein TERM 164 254135 - 254157 + F 71 -4.6 -4.57837 | opp_overlap 254123, overlap 254126 CTACGCGGACGGGCT GGCGCCGCTG CCA CCGCGCCCCC TTTTTCCCACCCTAT TERM 165 254879 - 254867 - g 78 -4.8 -4.73677 | TGGAGAAGAAAGAAA CCCA GATCT TGGG CTGGAAAGGCCTAGC ppa 254428 - 254949 + | inorganic pyrophosphatase CYA_0252 255048 - 255797 + | cytochrome c biogenesis membrane protein TERM 166 255969 - 255979 + G 86 -8.2 -4.65747 | overlap 255948 GGCGGATCTGCGTCT GGCC ATC GGCC TTTTCTTGGCAATTG TERM 167 257295 - 257257 - g 78 -10.2 -4.07568 | opp_overlap 257260, overlap 257260 CCTTCGCCGGCAAAA GAACCCCCTCCTGCCG CTCGCGT CGGCGGGACGGAGTCC TTAGCCAACGGCTAG TERM 168 257292 - 257260 - g 76 -8.3 -4.17048 | opp_overlap 257260, overlap 257257 TCGCCGGCAAAAGAA CCCCCTCCTGCCG CTCGCGT CGGCGGGACGGAG TCCTTAGCCAACGGC CYA_0254 255874 - 257310 + | putative cytochrome c-type biogenesis protein ResB CYA_0253 260417 - 257307 - | sensory box histidine kinase TERM 169 259076 - 259062 - G 72 -4.2 -4.59853 | overlap 259064 CCAATTGGGGAAAAA GCGGTA GAT CACCAC CCGCTCCACATCCAA TERM 170 259577 - 259595 + g 88 -6.7 -5.21236 | gap 1, opp_overlap 259568, overlap 259580 ACAGATCTGGCTGAT CGTGCAGC GAGT GCTGC-CG TTTTTGTTGTGGGTT TERM 171 259606 - 259619 + g 73 -3.1 -4.7497 | overlap 259601 TGCCGTTTTTGTTGT GGGTT CTGC AACTC TTTTTCCTGGGTCAA TERM 172 259763 - 259734 - G 74 -9.2 -3.91897 | GTTGCGACGCATAAA GGTCAGCTCCCA ACCCTG CGGGGGCCGACC CTGAGCCAGCCCCTG TERM 173 260152 - 260132 - G 70 -9.8 -3.56727 | opp_overlap 260129 CCGAAGTAAGCAGAA CTTTGAGG TTATG CCTCAAAG GACTGTCTAGGGGCG TERM 174 261239 - 261206 - g 75 -11.7 -3.64716 | gap 1, overlap 261204 261207 GCAGCTCCTAAAAGA GTGCCGCGAGCGGAAG GTG CTGCCGCTCG-GGCAG GGGAGCAAGTGGGGA TERM 175 261238 - 261207 - g 78 -15.2 -2.78508 | gap 1, overlap 261206 261204 CAGCTCCTAAAAGAG TGCCGCGAGCGGAAG GTG CTGCCGCTCG-GGCA GGGGAGCAAGTGGGG CYA_0255 261102 - 262256 + | FAD-binding protein TERM 176 263188 - 263220 + T 89 -8.5 -5.00616 | gap 1, opp_overlap 263187 CTTGGGGCAATTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGAGG CYA_0258 265249 - 264137 - | oxidoreductase, FAD-binding psbY 265435 - 265283 - | photosystem II protein PsbY CYA_0260 265550 - 265440 - | hypothetical protein CYA_0261 266866 - 265865 - | hypothetical protein CYA_0262 268629 - 267160 - | glutamate-cysteine ligase family 2 protein CYA_0263 270631 - 268685 - | alpha-amylase family protein TERM 177 269851 - 269882 + g 76 -5.8 -4.66833 | gap 1, overlap 269867 TGGCCCAGGGGGAGC CCACGTCAT-CCGGC TCC GCCGTCATGGCGTTG TTTTTGCCCTTGCGG TERM 178 269867 - 269879 + g 76 -6.9 -4.44355 | overlap 269851 CACGTCATCCGGCTC CGCCG TCA TGGCG TTGTTTTTGCCCTTG CYA_0264 272060 - 270708 - | tldD/pmbA family protein TERM 179 270993 - 270982 - G 70 -7.2 -4.05747 | TACAGCTCAGACAAA GGGG TTGT CCCC GGGGCCACGCTCAAA TERM 180 272081 - 272067 - RH 71 -4.2 -4.52589 | GCCGGCCATAGAAAA CTTGAG ATC CGCAAG AGAACAGTTCTATTA CYA_0265 272795 - 272214 - | hypothetical protein TERM 181 272461 - 272421 - GH 74 -6.6 -4.36914 | opp_overlap 272406 272446 GGCTTTGCGACAAAA GGCCTGCTTGGCCTCAGG ATCCG CCTGGCGCCACTCCGGCC CCGTCAGTTTGCCGG CYA_0266 272782 - 273051 + | hypothetical protein TERM 182 273769 - 273752 - g 75 -3.4 -4.90869 | gap 1, opp_overlap 273761 ACCACCAACGAAAAA CTGGGCC CCGTC GGCC-AG GGAGAAGCCATGGCC ispF 273344 - 273817 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CYA_0268 274000 - 275781 + | peptide/opine/nickel ABC transporter substrate-binding protein CYA_0269 277948 - 275783 - | glycogen debranching enzyme family protein TERM 183 276469 - 276479 + g 78 -6.8 -4.57209 | opp_overlap 276467 276468, overlap 276475 ACTGCTCCCAAAACC GCTG CTG CAGC TTTTCTGCTTGCTGT TERM 184 278003 - 277988 - R 70 -3.2 -4.7153 | overlap 278002 AAATAAGGCGAAAAA GCGGTT TTCA AACAGC ACCAGCTTCCACTGG CYA_0270 279093 - 278035 - | glycosyl transferase, group 1 family protein TERM 185 278228 - 278218 - G 84 -8.2 -4.46854 | overlap 278220 GGAGTCAACAATAAA GCCG GAG CGGC TGTCCGCCATCACCT CYA_0271 279323 - 279213 - | hypothetical protein CYA_0272 279300 - 279437 + | hypothetical protein CYA_0273 279449 - 279994 + | hypothetical protein CYA_0274 280033 - 281727 + | putative lipoprotein TERM 186 281835 - 281870 + F 75 -11.1 -3.52316 | opp_overlap 281834, overlap 281831 ATGAGGACATTCAAG GGGGCATCGGGTGAT CAGTCA ACCGCTCGGTGCCCC TTCCTTATGTCTCAG TERM 187 282583 - 282593 + F 71 -6.8 -4.25104 | CTATGGCTTGCCCAG TCCC AAA GGGA TTTTGCTGGCCGGGA TERM 188 284041 - 284065 + G 73 -11.3 -3.62572 | GGAAGCCACCTGTCA GGCTCTGCGCC GCT GCCGCGGGGCC TTTAGCCTGGTCATC TERM 189 284609 - 284599 - g 72 -2.4 -4.72272 | GGGGCTGATCAAAAA CCGC TAT GTGG GCCGCACCTTCATTC purF 283490 - 285079 + | amidophosphoribosyltransferase def-2 285108 - 285635 + | peptide deformylase CYA_0279 285646 - 286068 + | hypothetical protein TERM 190 286347 - 286334 - f 73 -8.1 -4.09685 | GGTCACTTGGTAAAA GGCTG CCGA CAGCC AGAAAAGAACGCAAA TERM 191 288429 - 288417 - g 73 -3.4 -4.81083 | TCGAACCAGCAAAAA TTCC TCTTC GGAA TTGGGACCTCCTCGC CYA_0280 286497 - 288758 + | thrombospondin N-terminal-like domain-containing protein TERM 192 289915 - 289905 - g 75 -3.2 -4.92783 | overlap 289908 AATCTAGTAGAAAAA GGAC CCC ATCC AACTGGAGAACATGT CYA_0281 289017 - 289997 + | hypothetical protein TERM 193 290173 - 290154 - f 86 -5.8 -5.07486 | gap 1 CACGTCTAACAAAAA TAGGA-GGT ATT ACCATCCTA GCCGACTCTCTGAAG TERM 194 291616 - 291603 - g 81 -4.5 -5.00616 | gap 1, overlap 291605 CCCTGGTGCAAAAAA GAGGGC TGG GCCC-C ATCGAAGTCGACAGC TERM 195 291615 - 291605 - g 76 -8.2 -4.13561 | overlap 291603 CTGGTGCAAAAAAGA GGGC TGG GCCC CATCGAAGTCGACAG CYA_0283 290261 - 291658 + | AAA family ATPase ppnK 292578 - 291655 - | inorganic polyphosphate/ATP-NAD kinase CYA_0284 292733 - 292846 + | hypothetical protein TERM 196 293798 - 293810 + G 71 -9.1 -3.72695 | TCCAGAGGTGGATTT CTGGG TAA CCCAG TTTGCTCCCACCGGT ispE 292938 - 293867 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase leuC 294018 - 295421 + | isopropylmalate isomerase large subunit thiD 296295 - 295483 - | phosphomethylpyrimidine kinase CYA_0288 296728 - 296528 - | hypothetical protein CYA_0289 297106 - 296798 - | ferredoxin, 2Fe-2S CYA_0290 297372 - 297115 - | hypothetical protein TERM 197 297158 - 297170 + g 83 -4.8 -5.05113 | overlap 297148 ACCACCGTCAGCGAC TGCG GCTGG CGCA TTTTCTTTATCTGAA CYA_0291 298483 - 297419 - | RNA methyltransferase TERM 198 298136 - 298103 - G 78 -6.5 -4.55446 | opp_overlap 298102, overlap 298104 CAACAAAGACCAAAA TTGGGGGCTGTAGCG CAAC CGCGGCAGCACCCAC ACTCGGTTAAGGGTG CYA_0292 298947 - 298516 - | RNase3 domain-containing protein psaL-2 299808 - 299332 - | photosystem I reaction center protein subunit XI TERM 199 299574 - 299543 - G 74 -10 -3.72893 | CAGGCTCCCAGGAAA CCGCTCAGCAGGCC GATG GGCTCGCTGCGCAG CGGCCCCAGCTTGGC psaJ 300053 - 299934 - | photosystem I reaction center subunit IX psaF 300658 - 300113 - | photosystem I reaction center subunit III TERM 200 301621 - 301602 - g 83 -4.8 -4.96848 | GTGCTCACAGAAAAA GCCGTGGC CTGT GCCGAGGC GCTGGGCCTCTCGAC TERM 201 301878 - 301919 + G 74 -12.9 -3.39005 | gap 1, overlap 301916 TACGGCCAGGGGAGC GGCGGCTGCGGTCAGGCCCC GAC GGGAGCTG-CAGCAGCCGTC TTCTGACGTTGTCTC gcp 300825 - 301925 + | O-sialoglycoprotein endopeptidase gidA 303820 - 301889 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 202 302983 - 303020 + g 83 -12 -4.10161 | gap 1 AGCGGGGCCCCTTGG CCTCCACCCAGCCGCCG TAGAC CGGCGTCTCG-TGGAGG TTTTCGCGGATGATG TERM 203 303176 - 303162 - G 80 -5.6 -4.68593 | overlap 303166 TCCATCACGGAAAAA TCGACG CTG CGGCGA TCCACACGGGCAGGG TERM 204 303591 - 303609 + g 74 -10.2 -3.73072 | GTAACTTTGCCCATC TCGCCGCC AAG GGCGTCGA TTTCGTGCACCAGTT TERM 205 305025 - 305041 + G 72 -2.2 -4.71828 | overlap 305027 CCCATTGCCCAGGCC TTTCGC GAGGG GCGGGA TTTTGTTACTCCGGT thrC-1 304116 - 305456 + | threonine synthase CYA_0299 305550 - 306074 + | fasciclin domain-containing protein CYA_0300 306111 - 306386 + | MoaD family protein CYA_0301 306404 - 306991 + | DNA-3-methyladenine glycosylase CYA_0302 307008 - 308276 + | hypothetical protein TERM 206 309170 - 309188 + G 79 -9.5 -4.22927 | CGTTCTGGGGGCTCT GGCGGTG CCAAT CGCCGCC TTTCTATGTTGGTGC CYA_0304 308636 - 310549 + | NHL repeat-containing protein phrB-1 312012 - 310546 - | deoxyribodipyrimidine photolyase TERM 207 310827 - 310804 - G 74 -10.2 -3.71527 | opp_overlap 310803 310805 310824, overlap 310798 310805 GTGGAAGTAGCGAAA GCCGCGGGCA TCGT TGCCCACGCC GGCGGTGTAGTTCCA hup-1 312340 - 312014 - | DNA-binding protein HU CYA_0306 312718 - 312458 - | hypothetical protein pmgA 312834 - 313277 + | pmgA protein CYA_0308 315018 - 313288 - | hypothetical protein TERM 208 313954 - 313930 - G 74 -4.9 -4.56775 | ATCCGTGGGCAAAAA GGCAAGGGCAA ACT CTCCCCTTTCC GGCAACAAGTGCTGC pheT 315172 - 317649 + | phenylalanyl-tRNA synthetase subunit beta argB 317853 - 318755 + | acetylglutamate kinase TERM 209 319236 - 319253 + G 72 -4 -4.57569 | overlap 319217 GCCTGTTGATCCTCA CCCTGC TGGCCC GCTGGG TTTTTCAGGCCCTGG CYA_0311 318965 - 320803 + | ABC transporter, permease/ATP-binding protein TERM 210 321125 - 321114 - f 74 -4.4 -4.79826 | ACAGATTATTAAAAA CTTG CTGT CAAG GCGGCAGACTAGCTA CYA_0312 321183 - 321554 + | hypothetical protein TERM 211 321545 - 321557 + F 70 -3.3 -4.6856 | opp_overlap 321537 321539 ACAAGACGAGCTGGT GCCCT GCT AAGGC TTTTTGCGCTGTTTC TERM 212 322779 - 322738 - g 76 -9.9 -3.88291 | opp_overlap 322770 GACGAGCTGGACAAA GCCTTCGCCGGAGCGGCAG GTTC CAGCGACTCCGACGGCGGC ACCTCCAGTCGTATC CYA_0313 321745 - 323256 + | AAA family ATPase CYA_0314 323388 - 323738 + | hypothetical protein TERM 213 323812 - 323791 - T 84 -10.1 -4.371 | opp_overlap 323791 323791 323793, overlap 323793 CCGAGCAGATTAAAA GAGGGGCTG AACT CAGCCCCTA CTTTTTTGCTTTTTG TERM 214 323791 - 323812 + T 77 -10.1 -3.90007 | opp_overlap 323791 323793, overlap 323791 323793 CCGAGCAGATTAAAA GAGGGGCTG AACT CAGCCCCTA CTTTTTTGCTTTTTG TERM 215 323791 - 323813 + T 100 -9.9 -5.54079 | gap 1, opp_overlap 323791 323793, overlap 323791 323793 CCGAGCAGATTAAAA G-AGGGGCTG AACT CAGCCCCTAC TTTTTTGCTTTTTGC TERM 216 323810 - 323793 - T 85 -12.7 -3.78877 | opp_overlap 323793 323791 323791, overlap 323791 GAGCAGATTAAAAGA GGGGCTG AACT CAGCCCC TACTTTTTTGCTTTT TERM 217 323793 - 323810 + T 79 -12.7 -3.48747 | opp_overlap 323791 323793, overlap 323791 323791 GAGCAGATTAAAAGA GGGGCTG AACT CAGCCCC TACTTTTTTGCTTTT pgk 325095 - 323857 - | phosphoglycerate kinase TERM 218 323950 - 323964 + g 76 -5.6 -4.56597 | AATGTGGGTCATTTT GTCGGC TAG GCCCAC TTTTTCCACAGCCGC TERM 219 324672 - 324703 + g 70 -7.2 -4.07568 | GGGCAAATTCTGGAT CGTTGGCTTCCTCT TCGG GGTGGAAGCGGACG TTTTCCAGCAGGGCC TERM 220 324823 - 324784 - G 91 -16.4 -3.54459 | gap 1, overlap 324773 GCAATCGGGGGCAAA GGCCA-CCGGCTGGCCCAG GAG CTGGGCAAGGCGGACGGCC ACAGGGGCGAGGCTA TERM 221 325117 - 325135 + H 72 -2.4 -4.8667 | overlap 325120 CCCTCCCCCTGGAGC CAAGAGAA TTT TTTTCTAG TTTTTCTCCCGTATC pds 325273 - 326691 + | phytoene desaturase crtB 326768 - 327703 + | phytoene synthase CYA_0319 327727 - 328542 + | ABC-2 transporter, permease protein CYA_0318 333596 - 328539 - | DEAD-box ATP dependent DNA helicase TERM 222 333441 - 333488 + g 72 -12 -3.25823 | gap 1 TACATAACTAGGGCT GAGCTGGAGGAGGGGTTCTGGCC AGA GGT-GGATCCCTTCCTCTAGCGC TTGCTCTACAAACGC CYA_0320 333895 - 333689 - | hypothetical protein CYA_0321 338501 - 333924 - | hypothetical protein TERM 223 336833 - 336861 + g 77 -4.3 -4.82901 | opp_overlap 336814 CCTCCAGCCAGAGGG CCACGCGGCAGAG CTC CACTGCCAAGGGG TTTTTGTCCACGCCG TERM 224 337300 - 337317 + g 74 -6.2 -4.43844 | opp_overlap 337295 GCATAGTTAACCCGG CGCGGC GGGGAG GTCGCG TTTTCTCGGTAGTAG TERM 225 337698 - 337713 + g 78 -6.8 -4.62069 | opp_overlap 337684 337690 AGAAGAGGCCAGCCG CTCCCG CAGT TGGGAG TTTTTGGGATGGGCA CYA_0322 341392 - 338498 - | putative helicase TERM 226 339487 - 339475 - G 91 -3.3 -5.40072 | CCTGGCGCAAAAAAA GCGCC TCC AGCAC CGCCTGGGTAACGCT TERM 227 339539 - 339560 + g 73 -10.9 -3.61398 | gap 1 CACGTGGGTGCCAAG GGTGCGGCGA ATT TC-CCGCACC TTGTTCAGCAGCACC TERM 228 340953 - 340937 - G 74 -5 -4.6468 | overlap 340928 340938 340939 GCAAAGGACACAAAA GCGCCG GATCT CGCCGC GATCCAGAAGTTCTC TERM 229 341464 - 341479 + H 80 -5.4 -5.00616 | gap 1, opp_overlap 341462, overlap 341462 TTTCCGGGAATGACT GCCG-AG CTT CTGCGGC TTTTTTGAGAACCCC TERM 230 341543 - 341516 - H 70 -9.9 -3.48276 | opp_overlap 341516 341517, overlap 341517 CCTGCCTGGACAGAA CTTCTGCCGGC GCCATG GCCGGCAAAAA TTCTACGTGTTGGAA CYA_0323 341673 - 342188 + | cyclic nucleotide-binding protein, trunction gap-2 342373 - 343392 + | glyceraldehyde-3-phosphate dehydrogenase, type I CYA_0324 343979 - 343377 - | 2',5' RNA ligase family protein TERM 231 343719 - 343709 - G 76 -8.2 -4.21773 | CGTGAATATAAATAA CCCG TGG CGGG AAGGCGCCGAAGCCA TERM 232 344065 - 344081 + H 72 -10.1 -3.57587 | overlap 344063 344058 344066 AGGGGTCAGAAGGTT TGTCGGG ATG CCCGACG TCTTCTTTAACTACT CYA_0327 344149 - 344571 + | ferredoxin-like protein CYA_0326 345191 - 344559 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 233 345170 - 345130 - G 71 -5.4 -4.41616 | gap 1, overlap 345131 AGTCCCCGAAATAAA GGGTTGACC-ACCAGCCAC TTGA GCAGCCAGTAGGCCAACCA ATCGCGGCGGCGATA CYA_0329 347148 - 346459 - | hypothetical protein TERM 234 346587 - 346620 + g 76 -10.1 -3.9392 | opp_overlap 346586 346581 CCGTCAAAAGCAACT GCCCTTTGGCATCGC ACCA GCGCAGCCAGCGGGC TTGTTTCCCCTCGAA TERM 235 346777 - 346767 - G 73 -3.2 -4.72272 | GGTTGGGATCAAAAA CCAC GTA GTAG CTGACCCGCATCTGC CYA_0330 347318 - 348421 + | FAD-dependent oxidoreductase CYA_0331 348529 - 348828 + | hypothetical protein TERM 236 350641 - 350623 - g 95 -10.2 -4.44284 | overlap 350625 AACCCAAGACGAAAA CAGGAGCG AGC CGCTCCGG CGGTGCGGGGATGAT TERM 237 350639 - 350625 - g 76 -11.4 -3.81853 | overlap 350623 CCCAAGACGAAAACA GGAGCG AGC CGCTCC GGCGGTGCGGGGATG groEL 349032 - 350660 + | chaperonin GroEL TERM 238 350690 - 350705 + T 79 -10.4 -3.91144 | overlap 350681 GCCCTTGTGGCCTAG GCCCCT ATTC AGGGGC TTTCTCCCGTCTCCG lysS 352224 - 350698 - | lysyl-tRNA synthetase TERM 239 351149 - 351196 + g 76 -8.3 -4.11692 | gap 1 TGGGGGGAGAGATCG GGGATCCCCTGCTGGGC-CAGG GCGGG CAAGAGCTCGGCGGTGGATCCC TTTTCCACGTCGATG CYA_0334 353185 - 352271 - | hypothetical protein radA 354966 - 353548 - | DNA repair protein RadA TERM 240 353884 - 353898 + g 72 -4.2 -4.56597 | opp_overlap 353883 GTCGTATTTGGAAAG CGGG ATCCCCA CCCG TTTTTCCAGCACCGC TERM 241 354150 - 354163 + g 74 -5.2 -4.56597 | CGCCGATTTCCTGGG CCGC CCCAAA GCGG TTTTTGACGGCGCGC TERM 242 354295 - 354309 + g 77 -2.7 -5.02074 | ATGGCCAACGATGAG CAGGG CCACC CCCAG TTTTTTGGCCACTCG aroC 356155 - 355019 - | chorismate synthase TERM 243 355574 - 355613 + g 70 -12.1 -3.17723 | gap 1, opp_overlap 355576 TTCAATTTTTTCAAT CATCG-CCGCCGCCGCGG CTGGA TCGGGGCAGCGGACGATG TTGGCTTCCACCTGC CYA_0337 356944 - 356210 - | pantothenate kinase CYA_0338 357665 - 356934 - | hypothetical protein TERM 244 357341 - 357329 - G 83 -4.7 -5.08601 | opp_overlap 357330 357338, overlap 357331 TCACCGTAACAAAAA CTCCC GCC GGGCG CCGCCAGTGGGGCGG TERM 245 357578 - 357554 - G 86 -13.5 -3.86822 | CAACGCGCCCAGAAA CCTCTGGCCGG GAT CCGGCCAGCAG CCCTAGCCCTGCCCC trpB 358867 - 357668 - | tryptophan synthase subunit beta TERM 246 358840 - 358824 - G 71 -5.7 -4.36914 | overlap 358825 358835 GTTTCCGGCACAAAA CGGCCCC CAA AGGGCCC AAACCGGCCCCGAGG TERM 247 359097 - 359120 + H 71 -8.8 -3.85817 | GGATTTTTACGATCA GGCCGTCC GATTTTGG GGGCGGCC TTTATGGACAAGCAT CYA_0340 359124 - 359483 + | hypothetical protein TERM 248 359505 - 359562 + F 70 -9.7 -3.53012 | gap 1, opp_overlap 359510 TCAAATCAACAAGCT GGAAACCCTT-CCTTACTCCCCTCTCCC TGT GGGAGAGGGGCTGGGGGTGAGGGATCCC TTTGCCAGCAGCAGG TERM 249 359975 - 360011 + G 83 -5.2 -5.08824 | gap 2, overlap 359977 GCCGGTCGGGATTTT TTCG-TGGTC-TCCGGCT ACG AGCCAGACGGCCAGCGGA TTTTTTACCTCAAAA CYA_0341 359627 - 360145 + | hypothetical protein CYA_0342 360158 - 360754 + | hypothetical protein TERM 250 361809 - 361785 - g 74 -4.9 -4.57569 | overlap 361789 CTACTTCGGCAAAAA GAAAGTCCGCT GCG AGCGCCCCTTC GACGCCGTGGCCCTG TERM 251 361805 - 361789 - g 74 -2.1 -4.85782 | overlap 361785 TTCGGCAAAAAGAAA GTCCGCT GCG AGCGCCC CTTCGACGCCGTGGC CYA_0343 360754 - 362295 + | DnaK family protein CYA_0344 362387 - 362509 + | hypothetical protein TERM 252 362824 - 362801 - T 70 -11 -3.04461 | CATTTACGCTGAACA CTGCTGAGCA TTAC TGCTCAGCGG TGAAGCGATAGCATT CYA_0345 364069 - 362789 - | ISSoc2, transposase TERM 253 362947 - 362925 - GT 72 -9.8 -3.55444 | overlap 362938 362939 GCGGTATCCCGCAAA GCCCTGAGCA TAA CGCCCAGAGC GCCTTGCCAATCTCG CYA_0346 364541 - 363924 - | ISSoc2, resolvase CYA_0347 364743 - 364609 - | hypothetical protein TERM 254 364744 - 364766 + H 77 -11.3 -3.62597 | gap 1 GGGCAACGTTGACAC TCCCACCGCC TAAA GGCGG-GGGA TTCTTACGCAGTCCA TERM 255 365598 - 365588 - g 74 -4.6 -4.66609 | CAGGCCATTCAAAAA GCCA AGG CGGC AGGCGTGCGGGTAGC CYA_0348 365438 - 366295 + | HAD family hydrolase TERM 256 366561 - 366547 - g 71 -11.4 -3.40639 | AACCGCATCAACCAA CGCCTG CAA CAGGCG GGCTATCCGGATCGC TERM 257 368280 - 368304 + G 80 -5.5 -4.70659 | TTGTTGGGAGCAGCA GGCCGACTCGG CCA CCGAGCAAGCC TTTTTGGATCTGGCC CYA_0349 366346 - 368466 + | UvrD/REP helicase domain-containing protein TERM 258 369349 - 369336 - g 77 -2.3 -5.03145 | opp_overlap 369348, overlap 369338 GAATTGGCCAAAAAA TACGG GGAT CCGGA GGCCGCCGCTTTTGT nusB 368586 - 369452 + | transcription antitermination factor NusB TERM 259 369992 - 370009 + F 72 -4.1 -4.72497 | opp_overlap 369990 369992 369995, overlap 369987 ATCCCTGGTACAACA GAAGCAG CGTT CTACTTC TTTTGTTGATCCATG CYA_0352 370022 - 370573 + | NADPH-dependent FMN reductase CYA_0353 371056 - 370637 - | putative lipoprotein TERM 260 370914 - 370904 - G 86 -8.2 -4.62471 | overlap 370905 CCCAACCTCCAAAAA GCCG CCC CGGC TAACGGCGGCAGGAA TERM 261 371102 - 371075 - H 78 -12.8 -3.28712 | GCTCCCGCTTCAGAA CTCCATCCCCCA AGTA TAGAGGATGGAG GCAACATCTCTAGCG CYA_0355 371225 - 372874 + | hypothetical protein CYA_0354 374061 - 372868 - | glycosyl transferase, group 1 family protein TERM 262 373227 - 373195 - G 73 -11.2 -3.64703 | opp_overlap 373212 CTCTTCCCAGGGAAA CAGCAGCAGCCGGC AATTG GCCAGCAGCTCCTG CAGGCGGTCTTGGGG CYA_0356 374477 - 374064 - | hypothetical protein CYA_0357 375007 - 374567 - | hypothetical protein CYA_0358 375971 - 375090 - | cation transporter, voltage-gated ion channel cation transporter TERM 263 375663 - 375652 - G 91 -3.6 -5.40474 | AGCCCGGCAAAAAAA GGCA AAAT CGCC AGCAAGTCAATGAGC maf 376112 - 376705 + | Maf-like protein gatB 378174 - 376702 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 264 376752 - 376763 + g 93 -3.6 -5.54894 | overlap 376743 CCAGCTTGGGATCCG CCCG TCCT TGGG TTTTTTTCATCAGTT TERM 265 377258 - 377271 + g 76 -5.9 -4.67234 | overlap 377256 377255 AATTCCGGCAGCTCC GCCTG CCAG CGGGC TTTTTGCGCTTCCGT CYA_0361 378395 - 378240 - | hypothetical protein TERM 266 378530 - 378508 - R 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG CYA_0362 378827 - 378672 - | putative acylphosphatase CYA_0363 379144 - 378824 - | hypothetical protein CYA_0364 379184 - 380626 + | gamma-aminobutyraldehyde dehydrogenase TERM 267 382108 - 382091 - g 95 -10.5 -4.46212 | opp_overlap 382102, overlap 382092 CCCCCTACCAGAAAA GCCGCCG CCAG CGGCAGC CGGGGCGGGCCGTCA chlD 380752 - 382770 + | magnesium chelatase, ATPase subunit D CYA_0366 382852 - 383601 + | hypothetical protein TERM 268 383677 - 383711 + T 84 -5.1 -5.15634 | gap 1, opp_overlap 383670 383677 383694 AGTGAAGAGAAGAAG CCTCTGGG-GTC GAAACACGGACA GACGCCCAGAGG TTTTTTCATGACCTG TERM 269 383941 - 383957 + T 77 -12.3 -3.27109 | opp_overlap 383935, overlap 383939 GGTTCCAAAGAGTCT CCCCTGA GCC TCAGGGG TCTTGGTTCAGTTGC CYA_0367 384408 - 383965 - | glyoxalase family protein mreB 384547 - 385575 + | rod shape-determining protein mreC 385636 - 386379 + | rod shape-determining protein mreD 386366 - 386995 + | rod shape-determining protein MreD TERM 270 387388 - 387378 - g 78 -6.8 -4.62069 | TGGGGACGGCAAAAA TGCC AAA GGCA CCGACTACTTCTGGA TERM 271 387495 - 387484 - g 73 -3.6 -4.72272 | overlap 387486 CTGCCGGAGGAAAAA CCGC ACCT GCAG CGAGTGCCCAACTAG CYA_0371 387283 - 387510 + | iron-sulfur cluster-binding protein CYA_0372 388073 - 387549 - | hypothetical protein TERM 272 387867 - 387843 - G 83 -5 -5.07652 | gap 2, overlap 387844 CCGCCCAAAACAAAA GGCCAGCGCCTG CAG CAGG-GCCG-CC AGGCTTACCCATCCC TERM 273 388403 - 388434 + r 78 -13.8 -3.1552 | opp_overlap 388410, overlap 388407 388410 GGCGCAATAGGATCC TCAAGAAGGCTCTC GCTG GAGGGCCTTCTTGC TCTTAATGGCTGCAC TERM 274 388407 - 388430 + r 79 -13.2 -3.39717 | opp_overlap 388410, overlap 388403 388410 CAATAGGATCCTCAA GAAGGCTCTC GCTG GAGGGCCTTC TTGCTCTTAATGGCT TERM 275 388410 - 388427 + r 71 -9.1 -3.83155 | opp_overlap 388410, overlap 388407 388403 TAGGATCCTCAAGAA GGCTCTC GCTG GAGGGCC TTCTTGCTCTTAATG CYA_0373 390457 - 388505 - | serine/threonine protein kinase TERM 276 388934 - 388902 - G 71 -9.7 -3.76952 | GCTACCCAACCCAAA GCCGTGGCCAGCAGC GTG GCCGCCACCCACCGC CAAGAGACCTGCCGC CYA_0375 390588 - 391445 + | inositol monophosphate family protein CYA_0374 392383 - 391400 - | glycosyl transferase, group 2 family protein TERM 277 392415 - 392431 + r 73 -5.1 -4.66163 | GTAAGGCAAACCCTA CCCCT AAAGTCA AGGGG TTTTTCCATACGGCT hemE 393533 - 392445 - | uroporphyrinogen decarboxylase crtE 393758 - 394651 + | geranylgeranyl diphosphate synthase CYA_0378 394648 - 395193 + | hypothetical protein CYA_0379 395236 - 395853 + | hypothetical protein CYA_0380 395885 - 396721 + | hypothetical protein CYA_0381 397039 - 396773 - | hypothetical protein TERM 278 397541 - 397560 + G 88 -7.9 -4.82901 | TTCTGGGCGGAGCTT TTGTGGG ATCCGC CCCACAA TTTTTCTACAGCCGC CYA_0383 397453 - 398280 + | hypothetical protein CYA_0382 398516 - 398277 - | hypothetical protein TERM 279 398638 - 398669 + H 88 -15 -3.50393 | TGTCGGCGGGGTAGC GGCGGGCGCGGCCC CCTG GGGCCTTGCCGGCC TTGTCTAAGCTACAG CYA_0384 398920 - 399153 + | hypothetical protein CYA_0385 400294 - 399356 - | hypothetical protein TERM 280 400593 - 400608 + r 93 -7.6 -5.37043 | opp_overlap 400593 TCACACGAGCTGAAA CCTTAC TCAG GTAAGG TTTTTTCTGTGGGCT ribD 401931 - 400816 - | riboflavin biosynthesis protein RibD TERM 281 401849 - 401835 - G 71 -9.2 -3.78934 | CCCCCCGGACAATAA CGCAGG CTA CCCGCG GGTTAGGGGAGGGGC TERM 282 403532 - 403520 - g 76 -5.5 -4.57073 | overlap 403524 CAGTTGGCGGAAAAA CTGAG CTG CCCAG AGCGCATCGAGACCC pgi 402053 - 403651 + | glucose-6-phosphate isomerase TERM 283 404118 - 404129 + G 76 -7.2 -4.386 | opp_overlap 404117 CATCACCCTGAAAGC GCCG GAAT CGGC TTTTGTGCGCGCTTG opcA 403771 - 404922 + | opcA protein CYA_0389 405408 - 405100 - | CAB/ELIP/HLIP family protein TERM 284 405342 - 405326 - G 72 -7.9 -4.1822 | TTGGAGTTGAAGAAA GCCATCG AAC CGAGGGC AACAGCAGCCACCAG CYA_0390 405737 - 405519 - | CAB/ELIP/HLIP family protein TERM 285 406687 - 406700 + G 74 -5.2 -4.56597 | overlap 406685 AGCGGGAGCTGCTGC GGGC CATGCC GCCC TTTTTGGGCGGGGGC CYA_0391 405906 - 407195 + | SufS family cysteine desulfurase CYA_0392 407196 - 408311 + | aldo/keto reductase family oxidoreductase CYA_0393 408787 - 408404 - | hypothetical protein TERM 286 409189 - 409207 + G 83 -5.2 -5.0133 | overlap 409178 GCTAGCCTTTCGCGA GATCCCTT ACG GAGGGCTC TTTTTTGGCCAGGTG CYA_0394 408911 - 409588 + | hypothetical protein CYA_0396 409596 - 410339 + | hypothetical protein CYA_0395 411573 - 410293 - | ISSoc2, transposase CYA_0397 412021 - 411428 - | ISSoc2, resolvase TERM 287 412178 - 412148 - H 95 -9.1 -5.24989 | gap 1, opp_overlap 412146 TGACATACGAAAAAA GCTCGGGATCCC CCAGGCTC GGGATCCC-AGC GGTTGACTACATCGT tpiA 412218 - 412985 + | triosephosphate isomerase treY 415792 - 412991 - | malto-oligosyltrehalose synthase CYA_0400 415943 - 416356 + | hypothetical protein TERM 288 416448 - 416483 + F 77 -3 -5.06414 | overlap 416469 416471 CTGGGGTTTTCCTAT CAGCCGGTGCTGCCGG ATCC CCCGCCGGAGCGGCTA TTTTTGTTAAACCGC TERM 289 416471 - 416481 + F 73 -8.2 -4.16307 | overlap 416469 416448 GCTGCCGGATCCCCC GCCG GAG CGGC TATTTTTGTTAAACC TERM 290 417001 - 416957 - g 77 -13.5 -3.27525 | opp_overlap 416956, overlap 416952 CCGCCGGAAATTCAA GCCGTGATCGCCCACGAGCTG GGC CACCTCAAGTGCAACCACGGC GTCTACTTGACGATG CYA_0401 416555 - 417418 + | M48A family peptidase TERM 291 417451 - 417479 + G 81 -7.3 -4.39407 | overlap 417452 CCTCGGAGTGACCTC TGGCCTCCCCC TGATTGT GGGGGAGACCC TTTTCGATTGTTTCC CYA_0402 417443 - 418339 + | PfkB family kinase CYA_0403 420067 - 418343 - | ABC transporter, permease/ATP-binding protein TERM 292 418524 - 418495 - G 82 -5.7 -4.91109 | gap 1, opp_overlap 418502 GGGCGATCACAAAAA CCGTGCAGC-GCTG CAT CAACCGCTGCAGAG CTTCCTGCACCAAGG TERM 293 420094 - 420083 - R 74 -7.2 -4.32579 | overlap 420085 AGATCTCAGAAGAAA GGGC TTCT GCCC CACTCAGCTTACCGG CYA_0404 420726 - 420172 - | hypothetical protein TERM 294 420756 - 420731 - R 70 -11.9 -2.52015 | gap 1, overlap 420730 420734 CCTAGAGGCATGAAG CCAG-CGCAGCG CTC CGCTGCGGCTGA GTCTAGCCGCAGGAG TERM 295 420794 - 420781 - R 72 -2.3 -4.94972 | CAGGAGAAGGAAAAA GCTTG CCCT CAGGC CGGGATCCCTCGATT panE-1 421748 - 420789 - | 2-dehydropantoate 2-reductase pyrR 422360 - 421806 - | pyrR bifunctional protein CYA_0407 422501 - 423031 + | pentapeptide repeat-containing protein CYA_0408 423829 - 423116 - | heme oxygenase TERM 296 423404 - 423422 + g 86 -8.8 -4.61231 | CCCCGGCGGCAGGCC CATGGCCC GGC GGGCGATG TTTTTCAGGATCTGG TERM 297 423710 - 423730 + g 81 -2.5 -5.24129 | GACAAAGTAAAAGTT GCCCACA TAGCGGC TGTAGGC TTTTTTATCCACCAC TERM 298 424901 - 424875 - g 75 -2.8 -4.84359 | overlap 424876 GGAGCTGGACAAAAA CGGTCGGCGC ACCTACA GCGCCAGCCT CATCCCCAACCGGGG TERM 299 427354 - 427407 + G 70 -10.1 -3.54424 | overlap 427355 TCTACCGGTCCCTAC TCGCTGGTAACCCAGCAGCCCCT GGGGGGTA AGGCGCAGCAGGGTGGCCAGCGC TTTGGCGAGATGGAG TERM 300 427355 - 427406 + G 72 -13.6 -2.72511 | overlap 427354 CTACCGGTCCCTACT CGCTGGTAACCCAGCAGCCCCT GGGGGGTA AGGCGCAGCAGGGTGGCCAGCG CTTTGGCGAGATGGA rpoB 424423 - 427824 + | DNA-directed RNA polymerase subunit beta TERM 301 427857 - 427883 + F 73 -8.6 -4.08144 | opp_overlap 427857 427860, overlap 427857 ATTCGGCTCAGGAGA GGAGGGGTGGGG TTC CTCTCCCCTTCC TTTGTAGTTGCTAGG TERM 302 429652 - 429640 - g 75 -3.3 -4.93696 | GGCAAAGAGGAAAAA GAGTC GGA GCCTC AGATTATCGAGGAGC rpoC1 427924 - 429807 + | DNA-directed RNA polymerase subunit gamma TERM 303 430974 - 430997 + G 71 -11 -3.53224 | opp_overlap 430969 ACCCAGTTAACCATG CGCACCTTCC ACAC GGGAGGTGTG TTTACCGGGGAGGTG TERM 304 431595 - 431642 + G 78 -5.4 -4.7497 | gap 1, opp_overlap 431582 AACGCCGCGGTGGTG TTGCACGAGGCGCGGGTGCGGGT GGA ATCC-CACCAGGGCCGGGAGCAA TTTTTGCTGGATACG TERM 305 432012 - 431993 - g 77 -4.2 -4.87665 | GGTTATCCAGAAAAA CGACATCC TGCG GGAGATCG TCATCAAGCCCGGAT rpoC2 429897 - 433805 + | DNA-directed RNA polymerase subunit beta' CYA_0412 433786 - 434304 + | uracil-DNA glycosylase family protein CYA_0413 434996 - 434337 - | putative transcriptional activator TenA CYA_0414 436229 - 435204 - | hypothetical protein CYA_0415 437094 - 436363 - | hypothetical protein TERM 306 436760 - 436742 - G 83 -7.4 -4.55491 | opp_overlap 436758 436759 GACTGAATGACAAAA CAGGAGAC CAG ATCCCCTG CCGCTGCGGCGCTTT CYA_0416 437646 - 437251 - | hypothetical protein CYA_0417 437290 - 437601 + | hypothetical protein TERM 307 437612 - 437598 - GT 70 -10 -3.41051 | GGAGCCTCAGGACAA CTAGCC GCA GGCTAG GCGGAAACCATGCCC CYA_0418 438103 - 437609 - | pentapeptide repeat-containing protein TERM 308 438258 - 438270 + H 93 -10.5 -4.55287 | AGAGCGCGCTAGGAT GGGCG CAA CGCCC TTTTCTCTGGATCCC gvpV 438313 - 438606 + | gas vesicle protein V TERM 309 438676 - 438660 - f 79 -2.1 -5.243 | opp_overlap 438660 438669, overlap 438662 CAAAGGAGCAAAAAA CTGGGTT TAG AGCCCCG TTCTGTCCTTTGGGA atpD 438981 - 440414 + | F0F1 ATP synthase subunit beta CYA_0421 441165 - 440425 - | DNA-binding response regulator CYA_0422 442080 - 441169 - | tetrapyrrole methylase family protein TERM 310 441729 - 441716 - G 71 -9.5 -3.72984 | overlap 441710 441707 CCAGAAGCAGCCAAA GCGGC CACT GCCGC TACCGGGCCAGGCAC CYA_0423 442169 - 442621 + | putative transcriptional regulator TERM 311 442631 - 442649 + F 77 -3 -5.03314 | GTCTGATCGCGCCTG CGGGAGGG AGA CCTTGCTG TTTTTTCCGAGTCAG TERM 312 443130 - 443143 + G 91 -9.5 -4.40601 | opp_overlap 443122 443123 443120 GAGAATACCCCCGAC GGGGC GACG GCCCC TTTGTTCTATGCCTT cobD-1 442644 - 443633 + | cobalamin biosynthesis protein CobD CYA_0425 444200 - 443916 - | hypothetical protein CYA_0426 444757 - 444197 - | hypothetical protein rca 446062 - 444839 - | ribulose bisphosphate carboxylase/oxygenase activase TERM 313 447022 - 446997 - g 78 -6.9 -4.59773 | gap 1, overlap 446998 GCCGAGCTGCAAAAA CTCACCT-CCCT CGA AGGGCAGGTGAT CATCGGCGCCGCCGT CYA_0428 446370 - 447848 + | high-affinity Na+/H+ antiporter CYA_0429 448440 - 447850 - | FHA domain-containing protein CYA_0430 448546 - 448764 + | hypothetical protein CYA_0431 448795 - 449529 + | hypothetical protein CYA_0432 449651 - 450451 + | hypothetical protein CYA_0433 450616 - 450858 + | hypothetical protein CYA_0434 454399 - 451199 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 314 452738 - 452720 - G 76 -10.2 -3.86897 | CTCATCCGGCACAAA CCCGGTCG GCA CGACCTGG AACAGCCAGTAGGTG TERM 315 454275 - 454255 - G 73 -11.1 -3.59979 | CGGCTCCAGGGTAAA CGGCGGTCA CCC TCACCGCCG GCGGCGCCACCTGCG CYA_0435 455750 - 454467 - | RND family efflux transporter MFP subunit TERM 316 455895 - 455917 + r 77 -11.3 -3.62597 | gap 1 GAACTAAGTTGACAC TCCCGCCGCC TGAA GGCGG-GGGA TTCTTACGCAGTCCA CYA_0436 457171 - 455921 - | ISSoc6, orfB transposase TERM 317 456095 - 456118 + g 72 -4.4 -4.60889 | CCGCTTGACACGCTT CCCAGAGGGT CTCC ACCCGTCGGG TTTTTCACCATAATT TERM 318 457265 - 457288 + G 78 -3 -5.00616 | opp_overlap 457251, overlap 457266 ACTACAACCATGCTG TGGGGCTAGC GGTT GTTCGCCTCG TTTTTTGCCCAAAGA CYA_0437 457222 - 457626 + | ISSoc6, orfA transposase CYA_0438 457780 - 458628 + | hypothetical protein CYA_0439 459972 - 458677 - | hypothetical protein TERM 319 459298 - 459277 - G 81 -6.5 -4.72272 | opp_overlap 459266 459277 GTCTGGGATTAAAAA CCCCTTGTC GCCG GGCAAGAGG TAGTTGGCGCGGATG CYA_0440 461085 - 460003 - | hypothetical protein CYA_0441 461983 - 461090 - | hypothetical protein CYA_0442 462321 - 461983 - | hypothetical protein CYA_0443 462718 - 462386 - | hypothetical protein CYA_0444 463866 - 462769 - | M8 family peptidase TERM 320 462849 - 462805 - G 81 -12.8 -3.72576 | gap 1 GCCGGTGGCATCAAA CCGCCGCAGCGGCAGG-GCCA ACTC CAGCTCCTGCAGCTCCAGCGG CTCCGAGAAGCGCCG TERM 321 463220 - 463207 - G 72 -3.8 -4.57073 | overlap 463212 GACGCTGGGCAAAAA GCCA AGCGCA TGGC CCAACTCGTGCAGGG TERM 322 464207 - 464187 - R 75 -11.1 -3.39595 | opp_overlap 464184 464171 GCTAAGTAGGCAGAA CTTTGGGGC TTT GCCCCAAGG AACTGTCTAGAAGCG TERM 323 464289 - 464267 - R 72 -9.9 -3.62597 | gap 1 TGGACTGCGTAAGAA TCCC-CTGCC TTTA GGCAGTGGGA GTGTGAATAATAACA TERM 324 464328 - 464343 + r 82 -2.4 -5.41746 | overlap 464329 AAGAGTGAGCGAAGA TGGGCC TGGC GGCACG TTTTTTTGAGCCCTT CYA_0445 464856 - 464359 - | hypothetical protein TERM 325 464988 - 464974 - R 80 -5.6 -4.86731 | CTCGGGCAAACAAAA CCAGAG AAC CTCAGG CAATCAAGACGAGAA CYA_0446 465163 - 465017 - | hypothetical protein TERM 326 465748 - 465731 - g 71 -9.1 -3.73953 | gap 1, opp_overlap 465720 465738 465740 ATGACCGCCAGCAAA GCCTCGGG CCA CCCG-GGC GGCTTTGCCAGCCAA TERM 327 466881 - 466907 + G 72 -12.3 -3.34517 | gap 1, overlap 466879 TTAGCGAAGATGCTT GTGCC-GGCCTG ACGG CAGGCCTGGCGC TCTTTGGCGGGCGCT CYA_0447 465509 - 467716 + | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein CYA_0448 467763 - 469085 + | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein TERM 328 469135 - 469146 + G 81 -7.2 -4.4767 | CTTGAGAGCATTACG CCCG CCGA CGGG TTTTCTGCTCCCTCC CYA_0449 469078 - 469722 + | hypothetical protein CYA_0450 470304 - 469759 - | hypothetical protein CYA_0452 470958 - 470548 - | hypothetical protein CYA_0453 470890 - 471030 + | hypothetical protein CYA_0454 471580 - 471065 - | hypothetical protein CYA_0455 471714 - 471577 - | hypothetical protein TERM 329 471788 - 471808 + H 84 -9.7 -4.42765 | CCGCAATGATAACGG GGAGTGGGT AGC GCCCACTTC TTTGCTTTTTTAGGG CYA_0456 471902 - 472375 + | hypothetical protein nusA 472535 - 473902 + | transcription elongation factor NusA CYA_0458 473958 - 474605 + | aromatic acid decarboxylase CYA_0459 475817 - 474747 - | alpha/beta fold family hydrolase TERM 330 475832 - 475854 + H 77 -11.3 -3.62597 | gap 1, opp_overlap 475818 AGGGAGGATTGACAC TCCCACCGCC TAAA GGCGG-GGGA TTCTTACGCAGTCCA TERM 331 475914 - 475934 + H 72 -9.7 -3.57798 | opp_overlap 475911 CGCCTCTAGACAGTT CCTTAAGGC AAA GCCCTAAGG TTCTGCTTACTTCTC CYA_0460 476202 - 476321 + | hypothetical protein cobH-1 476311 - 476940 + | precorrin-8X methylmutase CYA_0462 476947 - 477861 + | hypothetical protein TERM 332 478104 - 478119 + G 100 -10.4 -5.09426 | CCTGGTTTTGTTGGC CAGCGG GGAT CCGCTG TTTTTTGGGATTGGG cbiE/cbiT 477862 - 479121 + | precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE/T subunits TERM 333 479136 - 479153 + T 74 -12.7 -2.74792 | overlap 479135 ACGGCCTCGTCGCCC TGCCCCC AGCT GGGGGCA ATTTACCCCTCGTCC CYA_0464 479752 - 479156 - | hypothetical protein sfsA 479943 - 480662 + | sugar fermentation stimulation protein xth 480687 - 481472 + | exodeoxyribonuclease III msrA 481554 - 482228 + | methionine-S-sulfoxide reductase cysW 483081 - 482242 - | sulfate ABC transporter, permease protein CysW cysT 483883 - 483071 - | sulfate ABC transporter, permease protein CysT cysA 484933 - 483890 - | sulfate transport system ATP-binding protein TERM 334 484174 - 484159 - G 72 -3.9 -4.63218 | GGGGGCGCAAGAAAA GCCGA TGCGGG CCGGC CTGCGCTTCAGGGAG TERM 335 485108 - 485098 - R 71 -6.8 -4.25859 | GGGAATCCAAAACAA GGGA GCC TCCC TACAACTCGGCTTGA sbp 486127 - 485108 - | sulfate ABC transporter, sulfate-binding protein TERM 336 485468 - 485488 + g 86 -8.2 -4.56597 | overlap 485470 CTCATGTTCGTAGGT GAGCAGGG CATCC CCCTGCCC TTTTTGGAAAAAGAC TERM 337 485545 - 485501 - G 91 -9.1 -4.56597 | opp_overlap 485503 485505, overlap 485503 CCCTTTTTGGAAAAA GACATCCGTAGCCTCCCGCGA GTC CCGCGGCAGGACGCGGACGTT TTTGTAGACCTGAGT TERM 338 485543 - 485503 - G 81 -11.7 -3.90048 | opp_overlap 485503 485505, overlap 485501 CTTTTTGGAAAAAGA CATCCGTAGCCTCCCGCGA GTC CCGCGGCAGGACGCGGACG TTTTTGTAGACCTGA TERM 339 485503 - 485543 + g 90 -8.8 -4.84359 | opp_overlap 485503 485501, overlap 485505 CTTTTTGGAAAAAGA CATCCGTAGCCTCCCGCG AGTCC CGCGGCAGGACGCGGACG TTTTTGTAGACCTGA CYA_0472 489031 - 486236 - | acetyltransferase TERM 340 487267 - 487279 + g 78 -6.9 -4.57341 | TCACCCCTTGAAAGT GCTGG GAT CCGGC TTTTTCGGCAACATT adhE 491687 - 489057 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 341 490351 - 490363 + g 71 -4.8 -4.4261 | AGCATATTTTCCCGC CGGT AGGCC ACCG TTTTAATGTTGAGCA CYA_0474 492188 - 491778 - | OsmC family protein TERM 342 492074 - 492063 - G 73 -3.6 -4.6856 | opp_overlap 492066, overlap 492066 CAAAGAGGCCAAAAA CCAC TCCG GCGG CGTCATTCCCTGATC pflA 493122 - 492370 - | pyruvate formate-lyase activating enzyme TERM 343 493188 - 493207 + r 70 -2.8 -4.78933 | CTTCCCAATTGCTGT CTATGCTG CGCA CACCATGG TTTTGTCTCTTTTGA CYA_0476 493661 - 493284 - | pentapeptide repeat-containing protein TERM 344 493403 - 493387 - G 74 -10.1 -3.76224 | GCGTGATCCAGCAAA GCCCCCT CCA AGAGGGC ACCGCGGAAATCGCT pflB 496055 - 493749 - | formate acetyltransferase TERM 345 494137 - 494167 + g 83 -7.5 -4.65916 | GGGGCAAAGGGCTCG CCGGC-TCGCCGCCC GTC GGG-GGTGTTGCCGG TTTTCTTGCCGTAGA TERM 346 495191 - 495201 + g 76 -6.8 -4.49756 | CCCGCCCCAGGGACA TGGC AGC GCCA TTTTGCTCTTTGACG TERM 347 496195 - 496208 + H 81 -3.1 -5.21683 | TTGAGGGAGAGCTTT TAGCA ACTC TGCTG TTTCTTTTTTTAGAT TERM 348 496420 - 496434 + H 71 -4.2 -4.55721 | AGAAGACCTGGTGTT CGCGTT AGC AGTGCG TTTTCTATGAAGTTT TERM 349 497426 - 497438 + G 72 -7.7 -4.18763 | GCGGGGCCACGGGCT TTGGC GAG GCCAA TTTTCAGGCTTTGTT CYA_0478 496453 - 497505 + | putative 4-hydroxyphenylpyruvate dioxygenase CYA_0479 497952 - 497587 - | response regulator TERM 350 498217 - 498261 + r 75 -11.4 -3.39288 | overlap 498215 CAATGCAACGTTTAT CCCTAACTCCCCTCTCCC AGAGGGAGA GGGGCAGGGGGGTGAGGG TCTTATTCCGAGGTG CYA_0480 499196 - 498264 - | NAD-dependent glycerol-3-phosphate dehydrogenase family protein TERM 351 499774 - 499798 + G 74 -4.9 -4.63592 | overlap 499777 GTTCCTGACCAATTT GGACCAGATGC GCC GCAGTTGGTAC TTGTTTTTCTTCCAG TERM 352 500104 - 500116 + G 74 -4.8 -4.56597 | CCGCGAGCTGACCGA GGGA ATGGA TCCC TTTTTCCCCAACGGC CYA_0481 499316 - 500221 + | alpha/beta fold family hydrolase gcvH 500300 - 500689 + | glycine cleavage system protein H CYA_0483 501478 - 500693 - | GGDEF/FHA domain-containing protein TERM 353 501252 - 501213 - G 83 -6.3 -4.86385 | opp_overlap 501213 ACCTGGAAAAAGAAA GCCTCCTCCAGCCGGTC ATAATA GGCAAACTGCAGGAGGC TATTCCCCAGCTGGA CYA_0484 502670 - 501723 - | NAD-dependent epimerase/dehydratase family protein TERM 354 502316 - 502342 + g 76 -7.2 -4.37092 | opp_overlap 502332 502333, overlap 502317 CGTACACTTCTGAAG TGGAGGCCAG CAGGAAC CTGGCCCCCG TTTTCTGGGCCAGCT CYA_0485 504085 - 502667 - | UDP-glucose dehydrogenase CYA_0486 504227 - 505141 + | cation transporter CYA_0487 505488 - 505664 + | hypothetical protein TERM 355 505714 - 505678 - f 77 -12.4 -3.21595 | gap 2 AACTCTGATTACCAA CTTCGGCCGC-GA-GCCG GAG CAGCCTCAGCAGCCGAAG CCCACCCTGCCTGGG CYA_0488 505954 - 506490 + | HNH endonuclease domain-containing protein CYA_0489 507435 - 506500 - | alpha/beta fold family hydrolase TERM 356 507349 - 507333 - G 73 -6.5 -4.25283 | AGCCGTGCACCAAAA GCAAAGG CTG CCCCTGC TCGCCCTGTTTGACG ruvA 507552 - 508166 + | Holliday junction DNA helicase motor protein TERM 357 508647 - 508630 - g 76 -12.7 -3.53012 | GTCGGTGGCCGCAAA GCTGCCC ATCC GGGCAGC AATCCTGGACGCCCC nadD 508163 - 508786 + | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 358 508813 - 508796 - T 100 -11.3 -5.7946 | CCTTGAAGAAAAAAA GAGGAGG GATC CCTCCTC TCCGATAAACCCGTT psaC 509195 - 508947 - | photosystem I subunit VII CYA_0493 509434 - 509811 + | hypothetical protein TERM 359 509840 - 509869 + T 74 -4.3 -4.68593 | gap 2, opp_overlap 509837 509836, overlap 509844 CCTGCCCTAAAGCGG GGCATCGCCCTCG GGCGGA CG-GGGCGA-GTC TTTTTGGCTGCTAAG CYA_0494 510205 - 509831 - | hypothetical protein CYA_0495 510849 - 510208 - | hypothetical protein CYA_0496 512283 - 510982 - | putative gamma-glutamyl phosphate reductase CYA_0497 512853 - 512401 - | hypothetical protein CYA_0498 514188 - 512911 - | hypothetical protein TERM 360 513533 - 513522 - G 72 -7.2 -4.22535 | overlap 513519 ACAAGGCCAAAACAA CGGC GCCT GCCG TCCAAAACCAACGGC CYA_0499 515624 - 514185 - | hypothetical protein TERM 361 516088 - 516110 + G 87 -5.6 -5.10461 | gap 1 CATTCACATCAATGT TGGCCT-GC CGGATA GCGAGGCCA TTTTTCTTGCCTGCC TERM 362 516658 - 516688 + G 72 -3.9 -4.66609 | gap 1, opp_overlap 516640, overlap 516671 516672 GCTGACCGAAGCGTG GC-GCCTCGGCC AACCCCAG GGCCTGGGCTGC TTTTTGGCTCCCCTG CYA_0500 515750 - 516856 + | putative glutamate--cysteine ligase TERM 363 517752 - 517739 - T 79 -3.7 -5.0666 | TACGGAAAAAAGAAA CCGGC GGAT GCGGG ATGCAATCCACAAAG TERM 364 518187 - 518165 - T 77 -11.3 -3.62597 | gap 1, opp_overlap 518162 518159 TGGACTGCGTAAGAA TCCC-CCGCC TTTA GGCGGTGGGA GTGTCAATTCTGGCT CYA_0502 519785 - 518175 - | transporter, monovalent cation:proton antiporter-2 (CPA2) family/universal stress family protein TERM 365 519949 - 519911 - R 83 -11.1 -3.94853 | gap 1 GAACTCAACATCAAA GACTCCCAC-CCCCTGGA TCTG CCCAGAAGAGTAGGAGTC ATCAGCCCCAGCTCT CYA_0503 520668 - 520081 - | hypothetical protein hisIE 521404 - 520709 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein CYA_0505 523812 - 521665 - | polysaccharide deacetylase family protein TERM 366 522507 - 522484 - G 77 -2.2 -5.0538 | overlap 522486 GTCCACCCCAAAAAA GGCGCGGGGT CGGA ACTCGGCGGC GCTAGAGAGGCGAAA TERM 367 522703 - 522661 - G 70 -7.6 -4.06781 | opp_overlap 522690 522690, overlap 522654 ATCAAAAGGCACAAA GCGCAGCCGATCCCTG CCCAGCAGCAC CAGGGGGCGACCGCGC ACCACCTTGTCGTCT TERM 368 523960 - 523970 + r 82 -8.2 -4.62069 | opp_overlap 523960 ACTTCGGCCCAGGAA GGGG GAT CCCC TTTTTGCCCTAGGAA CYA_0506 524708 - 524217 - | putative phycobilisome linker polypeptide, phycocyanin-associated, rod CYA_0507 524898 - 525431 + | hypothetical protein TERM 369 525573 - 525600 + F 70 -9.8 -3.53012 | opp_overlap 525576, overlap 525575 525576 TTGTGGACTGCGTAG GAATCCCCCGAC TTTA GTCGGGGGAGTG TTTCGGGACAAAGAG TERM 370 525575 - 525598 + F 77 -12.4 -3.34398 | opp_overlap 525576, overlap 525573 525576 GTGGACTGCGTAGGA ATCCCCCGAC TTTA GTCGGGGGAG TGTTTCGGGACAAAG TERM 371 525597 - 525576 - f 85 -15.9 -3.14931 | opp_overlap 525576 525575 525573 TGGACTGCGTAGGAA TCCCCCGAC TTTA GTCGGGGGA GTGTTTCGGGACAAA TERM 372 525576 - 525597 + F 82 -15.9 -2.60496 | opp_overlap 525576, overlap 525575 525573 TGGACTGCGTAGGAA TCCCCCGAC TTTA GTCGGGGGA GTGTTTCGGGACAAA TERM 373 525808 - 525796 - f 77 -3.3 -5.14563 | opp_overlap 525802 525803, overlap 525797 CCGTCTATGAAAAAA TGCTG ACG CGGCA GCCGCTGCGCTTTTT TERM 374 525803 - 525818 + F 76 -5.4 -4.7497 | gap 1, opp_overlap 525796 525797, overlap 525802 TGAAAAAATGCTGAC GCGGCAG CCG CTGC-GC TTTTTGCTGGCTGAA TERM 375 526065 - 526087 + F 72 -2.6 -5.00616 | TTGATTGCTGTCAAT GAGGCTCACA AGC TCTCGGCCTC TTTTTTCGGCGGAGA TERM 376 526852 - 526865 + F 71 -6.7 -4.30023 | overlap 526850 CGGAAAAGCCCTTGA GCAAC TTTA GTTGC TTCTTTGTTATAGTT TERM 377 526995 - 526975 - f 72 -9.8 -3.56727 | opp_overlap 526972 CCGAAGTAAGCAGAA CTTTGAGG TTATG CCTCAAAG GACTGTCTAGGGGCG CYA_0510 527198 - 529402 + | CobN/magnesium chelatase domain-containing protein TERM 378 529424 - 529480 + T 79 -9.4 -4.25848 | opp_overlap 529414, overlap 529424 GAAAAGGCTCGTTGT C-TCGATCCCCAACCCCCCTCTCCCTCT GGG AGAGGG-GCCGGGGGTGAGGGGTTGACG TTTTAATAGCGAGTT CYA_0511 529808 - 529494 - | putative RNA-binding protein TERM 379 529693 - 529680 - G 74 -9.5 -3.89215 | TTCCACAAACCCAAA GCCGC GGAT GCGGC CCGTCTCGCGGTCGG valS 532801 - 530063 - | valyl-tRNA synthetase TERM 380 530323 - 530352 + g 71 -8.5 -3.86897 | overlap 530326 CGGCAGCCGCCACCT GCTTGGGATCCCT GGCC AGGGATCCCGTGA TTTCTAAGGACTCCA TERM 381 530326 - 530349 + g 71 -13.2 -3.01125 | overlap 530323 CAGCCGCCACCTGCT TGGGATCCCT GGCC AGGGATCCCG TGATTTCTAAGGACT CYA_0513 532955 - 533377 + | MerR family transcriptional regulator CYA_0514 533412 - 533570 + | putative lipoprotein CYA_0515 533422 - 533835 + | hypothetical protein cdsA 534796 - 533975 - | phosphatidate cytidylyltransferase CYA_0517 534947 - 534777 - | hypothetical protein CYA_0518 534953 - 535072 + | hypothetical protein TERM 382 535697 - 535670 - g 79 -9.2 -4.19746 | overlap 535671 CGTAGTGGAAAACAA CTTCTGGGCCAT TGGC ATGGCCCACAAA CGGGCCACCTCGGTA CYA_0519 535116 - 536117 + | dehydrogenase E1 component, alpha subunit TERM 383 536271 - 536232 - f 81 -10.8 -4.04206 | opp_overlap 536243, overlap 536233 TTAGCCTCAGAGAAA CCTTCTCCAGATCTGCGC AAGA GCGCAGATCTGTAAAAAT CGCTTTCCATTTGTT TERM 384 536270 - 536233 - f 80 -14.3 -3.02202 | opp_overlap 536243, overlap 536232 TAGCCTCAGAGAAAC CTTCTCCAGATCTGCGC AAGA GCGCAGATCTGTAAAAA TCGCTTTCCATTTGT TERM 385 536646 - 536675 + G 77 -2.1 -5.06961 | overlap 536647 536667 GACTTTGGCGATCGT GGCGGCTTG GAATCTCACCCA CAAGCCGCG TTTGTTTTTCTTCCT TERM 386 536667 - 536679 + G 84 -4.1 -5.15167 | overlap 536647 536646 TTGGAATCTCACCCA CAAGC CGC GTTTG TTTTTCTTCCTGCTG TERM 387 536730 - 536746 + G 72 -7.9 -4.20491 | overlap 536726 GGTGGGCGTGTTCTT GGCGCAG GAT CTGCTCC TCTTTTTCTTGATGT TERM 388 537268 - 537279 + G 72 -7.2 -4.23674 | GCCTATTCCTCCATT GCCC ATAT GGGC TTTGTCTTGATCGGC CYA_0520 536338 - 537918 + | NAD(P)H-quinone oxidoreductase subunit 4 TERM 389 537916 - 537946 + T 70 -10.4 -3.27994 | opp_overlap 537915 537918, overlap 537925 TTGCCCCCGACAGAT TAGGGAGCATCGGG ATC CCCGCTTCTCTCTA TTGGTCTCGCCTTGA TERM 390 537965 - 538011 + T 95 -7.5 -5.55855 | gap 2 GTCTCGCCTTGAACG GAAGAGCTGTTGCTTGAG--AAG TTG CTTACCTCAAGTTTCAGCTCTTC TTTTGTTTTTTTAGC CYA_0521 538292 - 538113 - | hypothetical protein TERM 391 538492 - 538482 - R 79 -4 -5.06451 | GAGGAGCCCAAAAAA CTTT GCA AAAG ATGAAAGATTGAGCA CYA_0522 539299 - 538610 - | V4R domain-containing protein CYA_0523 539795 - 539316 - | putative phycobilisome protein CYA_0524 540696 - 539818 - | putative phycobilisome protein TERM 392 540374 - 540364 - G 77 -2.4 -5.00616 | GGTCTCCTTAAAAAA CGCG ATA CGAG TCAAAAGATCGAGCG bchJ 541434 - 540751 - | putative bacteriochlorophyll 4-vinyl reductase TERM 393 541135 - 541113 - G 88 -4.1 -5.3104 | CCAGCAAAAACAAAA GGTTGGACT GCTTG ACCCCAACC CCGTACTCCCGCTCG CYA_0526 542092 - 541607 - | iron-sulfur cluster-binding protein TERM 394 542156 - 542125 - H 86 -5.9 -5.04868 | gap 1 TCAAAGCAAACAAAA CCTCTGCCGACAGG CACGC CCTGCCG-CAAAAG CAATGCAAGCGGAAA CYA_0528 542537 - 543100 + | putative phycobilisome linker polypeptide CYA_0527 544068 - 543064 - | taurine ABC transporter periplasmic substrate-binding protein TERM 395 544204 - 544215 + H 71 -7.2 -4.07885 | overlap 544168 CAGAGGGAGAGGGGA GCGG GATC CCGC TTTTGCGGCAGGATC cobA/hemD 544262 - 545764 + | uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase menB 545801 - 546625 + | naphthoate synthase TERM 396 549055 - 549067 + G 72 -2.6 -4.72846 | opp_overlap 549051, overlap 549064 CGGCGATTTAACGAG CGCT ACGCC GGCG TTTTTGCCTATCTCC TERM 397 549403 - 549380 - g 79 -8.2 -4.35044 | gap 1, opp_overlap 549385 TCATTCAAAGAGAAA TGGA-AGAGGC AGT GCCCCTTTCCA TACCGCTGGTGGTGG polA 546670 - 549456 + | DNA polymerase I grxC 549522 - 549782 + | glutaredoxin 3 TERM 398 549848 - 549866 + T 71 -8 -3.92542 | GCTAACCGGCGGCCT GCCTGAGC TGG GCACGGGC TTGTTTGAGCATGGC CYA_0533 550130 - 549834 - | hypothetical protein TERM 399 549956 - 549930 - G 78 -12.2 -3.74251 | GAGAGGGTGATCAAA GGGGATGCGCAG CTT CCGCACAGCCCC ATCCACCTCCACCTG CYA_0534 550806 - 550279 - | UbiE/COQ5 family methlytransferase CYA_0535 551700 - 550816 - | arginase family protein TERM 400 551132 - 551116 - G 73 -3.6 -4.77036 | overlap 551118 GTCCACCACCAAAAA CACCGG CTGCT CCGGCA AAGCCTCCACCACCT psaD 551962 - 552357 + | photosystem I reaction center subunit II TERM 401 552389 - 552413 + T 100 -15.8 -4.71791 | CTTTCTGTCTTGTCG GATCCCCTGG CCAGC CCAGGGGATC TTTATTTGTTCGTCT TERM 402 552687 - 552666 - T 91 -17.3 -3.34043 | TGGACTACGTGAGAA TCCCCCGCC TTCA GGCGGGGGA GTGTCAAAACCCGGG CYA_0537 553335 - 552727 - | anti-oxidant AhpCTSA family protein TERM 403 553315 - 553292 - G 72 -4.4 -4.57569 | gap 1, overlap 553293 553294 GCAGTGGCCGAAAAA TCGGGAGCGGG CTG CCC-CACCCGC AGACATCCTTCCTGA CYA_0538 553397 - 553501 + | hypothetical protein TERM 404 553713 - 553697 - g 74 -10.1 -3.72576 | overlap 553701 TGCCCTGCGAGGAAA CCGAGGC TCG GCCTCAG GAGCCGGGATCCCCA CYA_0539 553498 - 553734 + | hypothetical protein CYA_0540 553993 - 553736 - | hypothetical protein CYA_0541 553993 - 554184 + | hypothetical protein TERM 405 555220 - 555232 + G 74 -9.1 -3.92373 | overlap 555219 GATCTCCAGCCAGTC GCGCA CGG TGCGC TTTGTGGATACCATC glpX 554249 - 555292 + | fructose 1,6-bisphosphatase II TERM 406 555319 - 555357 + F 71 -11.8 -2.74322 | overlap 555311 555319 555321 555324 CCCGACATCTCCCTC GGCAAGGGCGGCTTTC CTCTGGC GAAGGTCGCTCTTGTC CTTTGGGAAGTTAAG TERM 407 555994 - 555980 - g 87 -5.6 -5.15969 | TCGCAAGTGAAAAAA GCGCAG CAA CTGGGC CAGGCCTGCAACGGC TERM 408 556720 - 556697 - g 73 -3 -4.7173 | CAGGAGATGGAAAAA GCCCTCTCCC GCCT GGGCAAAGAC TTCGCCGAAAAGCAC hemA 555611 - 556906 + | glutamyl-tRNA reductase CYA_0544 557019 - 557126 + | hypothetical protein typA 557310 - 559127 + | GTP-binding protein TypA CYA_0546 561246 - 559138 - | hypothetical protein TERM 409 560688 - 560637 - G 91 -2.9 -5.42198 | gap 2, overlap 560650 560680 GGGCAAAAAACAAAA GGCCGACGCCAAAGTTGACCGCCAG GCTG CCGGCTACCAAC-C-AGCGCAGGCC ATTGCGCAGCCAGGG cinA 562600 - 561284 - | competence/damage-inducible protein CinA CYA_0548 563216 - 562722 - | acetyltransferase CYA_0549 563780 - 563304 - | ISSoc3, orfA transposase TERM 410 564143 - 564111 - R 89 -8.5 -5.00616 | gap 1, opp_overlap 564110 CCCCGCTTCAAAAAA GCGGGGGAGT-TGA GATCCT TCACATTCCCCCGC ATCAATTGCCCCAAG CYA_0551 565394 - 565110 - | hypothetical protein CYA_0553 565575 - 566657 + | CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein CYA_0552 567022 - 566654 - | putative lipoprotein CYA_0554 569000 - 567087 - | OMP85 family membrane protein TERM 411 567419 - 567387 - G 78 -3.4 -5.00616 | gap 2, overlap 567389 GCCGCCCTCAAAAAA TCCCCGCACCGAGCTG CCC CCGC-CGATG-GGGAA AGCATCGTAGGGAGC CYA_0555 569727 - 569380 - | hypothetical protein CYA_0557 570008 - 570109 + | hypothetical protein cysE 570899 - 570096 - | serine O-acetyltransferase CYA_0558 571083 - 571424 + | glutaredoxin-like protein bolA 571433 - 571714 + | BolA protein TERM 412 571856 - 571878 + F 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC CYA_0560 572078 - 572428 + | hypothetical protein topA 575142 - 572482 - | DNA topoisomerase I TERM 413 572782 - 572802 + g 83 -5.3 -5.0538 | overlap 572772 CTCGCGCAGGGGCTT GGCCGAG CCGCGCC CACGGCC TTTTTTGGGCTGGGC CYA_0562 575343 - 575762 + | glyoxalase family protein dnaX 578068 - 575990 - | DNA polymerase III, subunits gamma and tau TERM 414 576516 - 576532 + g 70 -7.9 -4.00042 | AGCAGGTTGTGGAGC GCAGAGC AGA GCTCGGC TTCTTTGCTGCGCAC TERM 415 576721 - 576733 + g 76 -5.5 -4.58395 | overlap 576701 GCAGCTTGAGGGGAT GCGGA TCT TTCGC TTTTTCCGGGCTGGC TERM 416 576907 - 576941 + g 78 -14.2 -3.06696 | overlap 576914 TTCCGACCGTTGGCG GGCCGACGGCTGGGAG CGG CTCTCCGCCTTTGGCC TCTATTGACGGCAGC TERM 417 577553 - 577541 - G 71 -9.1 -3.75153 | GCGGCGGAAGTCAAA CCGCT GAC AGCGG GAAACGATGGTGGGC CYA_0564 578693 - 578157 - | hypothetical protein TERM 418 578435 - 578466 + g 86 -7.2 -4.71426 | overlap 578428 GCCGGTAGAGCTCCG GCAGCTCCTGGAGC ATCT GCTCCAACACCTGC TTTTCTTGGTAGAGC TERM 419 578718 - 578707 - R 72 -5.8 -4.43208 | overlap 578703 ATAGCTGCAAAGAAA GGGA TCCC TCCC CCGTCACTCTATCCG TERM 420 578743 - 578763 + r 70 -9.6 -3.50393 | TATCCGGCTCGGCGG GGTGGGGC AAATG GCCCCTCC TTCTCTGGGGTGAGC coaE 579414 - 578722 - | dephospho-CoA kinase TERM 421 578845 - 578857 + g 78 -4.7 -4.77165 | GTCCAGCACTACATG GGCGC GAC GGGCC TTTTCTTCTAGGGGC CYA_0566 581181 - 579514 - | alpha-isopropylmalate/homocitrate synthase family transferase CYA_0567 581542 - 581171 - | hypothetical protein CYA_0568 581831 - 582655 + | PP-loop family protein TERM 422 582664 - 582648 - f 81 -13.7 -3.28712 | CGCCCCCGCCGACAA CGGGCTG AGC CAGCCCG GGGGCTTGGGCTGAA TERM 423 584225 - 584241 + G 93 -7.9 -5.06414 | overlap 584226 ACTCCAATGGCTTTT TGGCGGG GGC CTCGCCG TTTTTGTTCGACCGC CYA_0569 582703 - 584529 + | hypothetical protein CYA_0570 584810 - 585091 + | hypothetical protein CYA_0571 585490 - 585116 - | putative lipoprotein CYA_0572 586202 - 585522 - | hypothetical protein CYA_0573 586831 - 586289 - | hypothetical protein TERM 424 587221 - 587211 - H 82 -2.4 -5.4833 | opp_overlap 587213 TCAGTTAAGAAAAAA GCCG TTG CGGG GTGTAATCCCGCTGC CYA_0574 587313 - 587771 + | S-adenosylmethionine decarboxylase proenzyme speE 587800 - 588738 + | spermidine synthase CYA_0577 588838 - 589989 + | putative UDP-sulfoquinovose synthase CYA_0576 590897 - 589986 - | histone deacetylase family protein CYA_0578 591267 - 590947 - | hypothetical protein CYA_0579 591608 - 591438 - | hypothetical protein CYA_0580 592186 - 591848 - | iojap protein CYA_0581 592873 - 592232 - | HD domain-containing protein TERM 425 592507 - 592492 - G 74 -2.4 -4.83615 | CATCGGCTACAAAAA CCACAC AACT GAGCGG ATCCATGCCGGGCCG TERM 426 592719 - 592732 + g 72 -2.3 -4.77036 | opp_overlap 592697, overlap 592720 AAGTCGTGCATCAGC CCTGC CCAA GCAGC TTTTTGCTCATCCAG lepA 594677 - 592866 - | GTP-binding protein LepA CYA_0583 595468 - 594944 - | hypothetical protein glyQ 596602 - 595616 - | glycyl-tRNA synthetase subunit alpha CYA_0585 597418 - 596648 - | T1 family peptidase CYA_0586 598887 - 597478 - | GTP-binding domain-containing protein TERM 427 599064 - 599049 - H 79 -11.8 -3.54489 | overlap 599045 TTAAGCTCAAAGCAA GGCGGC CTCA GCCGCC GGGATCCGCAACTCA CYA_0587 599119 - 599403 + | hypothetical protein TERM 428 599908 - 599921 + G 74 -9.5 -3.95219 | overlap 599910 GCAACCCCACCATCA GCGGC GATG GCCGC TTTATCGCCTTTGAG CYA_0588 599457 - 600041 + | WD-40-like beta propeller repeat-containing protein CYA_0589 600076 - 601260 + | succinyldiaminopimelate transaminase TERM 429 601443 - 601455 + G 71 -6.2 -4.31433 | TGGCGCTCTTGAGTC GGGC AGGTC GCCC TTTCTTCTACCGCTC CYA_0590 601421 - 602164 + | hypothetical protein hisD 602408 - 603721 + | histidinol dehydrogenase TERM 430 603889 - 603879 - f 73 -5.4 -4.614 | CCGAAGGACATAAAA GACA TAA TGTC GGCTGCCCCCGAAGC CYA_0592 603885 - 604595 + | hypothetical protein TERM 431 604720 - 604733 + G 71 -8.1 -3.87641 | AAGTACGACGCGGCT GGCCT TTAG AGGCC TTTGTGGGCGATGTT TERM 432 604954 - 604979 + G 93 -9 -4.78107 | TCGAGCTGATCTCGC CGGCAGGG CCCAGCGATC CCCTGCCG TTTTTGGTGATGATG CYA_0593 604692 - 604997 + | hypothetical protein CYA_0594 605022 - 606212 + | TPR repeat-containing protein CYA_0595 606572 - 607189 + | ISSoc2, resolvase CYA_0596 607044 - 608261 + | ISSoc2, transposase TERM 433 608839 - 608809 - g 74 -6 -4.52857 | ACCTGCGAGACAAAA GCCCAACAATACGG ATC CCACGCCGCTGGGC GACGCTGCAGCGACA TERM 434 609138 - 609153 + G 72 -2.6 -4.77165 | GAGGAGCGCACCCGA CAGATT TTGG AATTTG TTTTCTTCTACGACC TERM 435 609197 - 609184 - g 77 -3.8 -4.89063 | TCACCCAAAAAGAAA CAGC AGAGCG GCTG GGGATCAGTGCCGTT CYA_0597 608382 - 609281 + | RNA polymerase sigma factor SigF CYA_0598 610247 - 609477 - | hypothetical protein TERM 436 610409 - 610425 + H 74 -2.9 -4.95896 | overlap 610411 TTGAAGCGGAAAACT TTGCGGT CAA GTCGCGA TTTTTGTGGGTTTCT CYA_0600 610837 - 611103 + | hypothetical protein TERM 437 611453 - 611465 + F 91 -9.1 -5.02476 | CTTTTTGCCTTGCTG GCCTC AGG GAGGC TTTTTTGGGAGATCT TERM 438 611603 - 611618 + F 72 -6.1 -4.44046 | overlap 611601 ACCGTCCTGTTCAGG TGGGC TCCCAC GCCCA TTTCTTTGAGGTCAA ureC 611850 - 613559 + | urease subunit alpha ureE 613567 - 614016 + | urease accessory protein UreE ureF 614023 - 614676 + | urease accessory protein UreF ureG 614688 - 615296 + | urease accessory protein UreG TERM 439 615313 - 615324 + G 77 -4.4 -4.8622 | GCGTCCCCACCAGCT TTGG TTAG CCAA TTTTTGGTTAGCCAA CYA_0607 615313 - 616104 + | putative urease accessory protein UreD TERM 440 616083 - 616122 + F 74 -11.5 -3.24747 | opp_overlap 616082 616094 616106, overlap 616082 616118 AGCCGTAGACGTAAT GC-GCTATAGCAGCGCCCT TTAA AGGGCGCTGCC-TGGCCGC TTGATCGTGTAAGAG TERM 441 616111 - 616094 - f 73 -12.7 -2.62933 | opp_overlap 616082 616083, overlap 616082 616106 TAATGCGCTATAGCA GCGCCCT TTAA AGGGCGC TGCCTGGCCGCTTGA CYA_0609 617290 - 617655 + | hypothetical protein TERM 442 618133 - 618161 + G 81 -3.7 -5.0916 | overlap 618104 TTTGCAGCAAGTCTG GGCAGGGATGGTT TTG AGTCTGCTCTGCC TTTTTCTGTTGGCAG TERM 443 618221 - 618246 + G 73 -6.8 -4.31835 | gap 1, overlap 618204 GCGGTGGGGCCCCCT CCGGC-AGGGG AGCTG CCCATCGCCGG TTTCTTGTGCCAGTT CYA_0610 618095 - 619252 + | SCP family protein nirA 619713 - 621260 + | ferredoxin-nitrite reductase TERM 444 622083 - 622066 - g 77 -4.1 -4.8622 | CTGGTGAACCAAAAA GAGGG GTATAGTG CCCTC ACCACCGGCGAGCTG nrtA 621322 - 622644 + | nitrate ABC transporter, nitrate-binding protein NrtA TERM 445 623091 - 623113 + G 81 -2 -5.1287 | TTTGGCAGGACACCT GGGATC CCCTCATTAAA GATCCC TTTTTTGACTATGGC ntrB-1 622778 - 623737 + | nitrate ABC transporter, permease protein NrtB TERM 446 625550 - 625578 + G 70 -7.4 -4.08692 | gap 1, overlap 625551 CACCTCTGGATCCTG ACGCAGATGGCTC GCTG GGGCC-TCTGCGC TTTTCCCCGCAATTG ntrC-1 623810 - 625801 + | nitrate ABC transporter, ATP-binding protein NtrC TERM 447 625786 - 625802 + F 70 -2.9 -4.72029 | GCTGCAGGAGTACCG GCTCAGC GAA GTTTAGC TTTTGTTACCTTAAA TERM 448 626231 - 626221 - g 76 -6.8 -4.46112 | GTTTACCCAAACAAA TCCC GGC GGGA GAAAAGGGAAATTGT ntrD-1 625840 - 626682 + | nitrate ABC transporter, ATP-binding protein NtrD TERM 449 627003 - 626977 - g 70 -7.2 -4.05788 | opp_overlap 626974 CCCGGCCAAACCAAA GGCAGAGTCAGA AGA CCTGATGCTGCC TACTCATCTCCAGAT CYA_0618 626716 - 627132 + | hypothetical protein CYA_0617 627213 - 627118 - | hypothetical protein TERM 450 628329 - 628341 + G 74 -6.2 -4.4078 | opp_overlap 628320 628319, overlap 628325 GCAAATTGGCCGACC GGGG ACCGG CCCC TTTTCCTTGACCGGC narB 627358 - 629493 + | nitrate reductase CYA_0621 629518 - 630009 + | hypothetical protein CYA_0620 631174 - 629981 - | ISSoc1, transposase TERM 451 631568 - 631594 + r 79 -12.2 -3.67775 | AAAGCTGCTTTATGG GCCCTGGAGGAG CGA CCCCTCTGGGGC TTCTTCCATCCGGCT purD 632930 - 631635 - | phosphoribosylamine--glycine ligase TERM 452 632678 - 632660 - G 72 -4.4 -4.57073 | overlap 632661 632662 GACTGGGGCCAAAAA TGGGCAGC CCC GCTGCCTG AAAGGCGTCCACAAT CYA_0623 634186 - 633056 - | glycosyl transferase, group 2 family protein TERM 453 633848 - 633863 + g 78 -6.8 -4.56597 | overlap 633849 TAGGGCGGCAACGGC TTGGGC ACAG GCCCAG TTTTTGCCCACCCAG CYA_0624 635602 - 634313 - | HD domain-containing protein TERM 454 636392 - 636432 + G 71 -14 -2.64616 | gap 1, overlap 636394 TGCCCTGATCCCCTT GGGCCAGCAG-CAGCCCAG CAGC CTGCGCCGACTGCTGGCTC TGGTCTCCGTCGGCC TERM 455 636394 - 636430 + G 70 -13 -2.8655 | gap 1, overlap 636392 CCCTGATCCCCTTGG GCCAGCAG-CAGCCCAG CAGC CTGCGCCGACTGCTGGC TCTGGTCTCCGTCGG CYA_0625 635727 - 636782 + | GDSL-like lipase/acylhydrolase domain-containing protein CYA_0626 638650 - 636800 - | metallo-beta-lactamase family protein dapA 639824 - 638904 - | dihydrodipicolinate synthase CYA_0628 640132 - 640758 + | nitroreductase family protein trpD 642929 - 641898 - | anthranilate phosphoribosyltransferase CYA_0631 643759 - 642959 - | hypothetical protein purN 644448 - 643786 - | phosphoribosylglycinamide formyltransferase TERM 456 644908 - 644930 + H 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC CYA_0633 645187 - 645657 + | hypothetical protein TERM 457 646113 - 646133 + G 74 -5.3 -4.56775 | opp_overlap 646111, overlap 646088 646114 AGCTGGTGGAACACC TGCGGGAGC GGG GCTTTCGCC TTTTTGACGCCCAGT aat 645674 - 646252 + | leucyl/phenylalanyl-tRNA--protein transferase CYA_0635 646344 - 646526 + | hypothetical protein sasA 646673 - 647806 + | adaptive-response sensory kinase CYA_0636 648272 - 647772 - | fasciclin domain-containing protein TERM 458 648005 - 647983 - G 72 -4 -4.55295 | overlap 647964 647963 CCCTCGATAAACAAA TCGATGGGGG ATC CCTCTACCGA GCCTACACGCTGGTA CYA_0638 649717 - 648407 - | CO2 hydration protein TERM 459 648571 - 648558 - G 71 -5.2 -4.41716 | overlap 648554 AGAGGATACAAGAAA GCGG CTCTCC CCGC CTGGATCACGGCTGA CYA_0639 651292 - 649763 - | NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein CYA_0640 653168 - 651333 - | NAD(P)H-quinone oxidoreductase subunit F CYA_0641 653461 - 653300 - | hypothetical protein psbM 653628 - 653521 - | photosystem II reaction center protein M CYA_0643 654005 - 653709 - | iron-sulfur cluster-binding protein TERM 460 655875 - 655862 - g 71 -8.1 -3.85698 | GGCGTCTTCCAGAAA GTGGG GGAT CCCAC CACGCGCAAGGTGCA psbB 654368 - 655900 + | photosystem II P680 chlorophyll A apoprotein TERM 461 655918 - 655961 + F 74 -10.2 -3.63068 | overlap 655919 CTTTCTCGCGGGATG ACCGCCGGCACTCTGTTTCT CTGG GGAGAGGGGGTGCTGGCGGC TTTGAGCTAATCTGG TERM 462 655919 - 655960 + F 76 -13.7 -2.7752 | overlap 655918 TTTCTCGCGGGATGA CCGCCGGCACTCTGTTTCT CTGG GGAGAGGGGGTGCTGGCGG CTTTGAGCTAATCTG psbT 656014 - 656112 + | photosystem II reaction center protein PsbT TERM 463 656198 - 656223 + F 100 -11.9 -5.70761 | opp_overlap 656180 656201 CAGTTGTACCCCGTA CAAGGCCGG AAAAATCC CCGGCCTTG TTTTTGTTTTGTTTT TERM 464 656785 - 656809 + G 74 -4.8 -4.66163 | overlap 656786 TTTGGTGACGGCCCA TGCCATGCGG GGCGA CCGCGAGGCC TTTTTGGCTCAAAGT CYA_0647 656510 - 656917 + | response regulator purQ 657591 - 656914 - | phosphoribosylformylglycinamidine synthase I TERM 465 656985 - 656950 - G 86 -11.8 -4.1196 | AATGGACTGCCAAAA GGGGATCCCATCCTGC CCCG GCAAGTCGGGATCCGC CGCCCGCTCCGGGTG purS 657901 - 657644 - | phosphoribosylformylglycinamidine synthase, PurS protein CYA_0649 657961 - 658734 + | putative pilus biogenesis protein comB 658781 - 659509 + | 2-phosphosulfolactate phosphatase CYA_0650 659844 - 659506 - | hypothetical protein argC 659997 - 661103 + | N-acetyl-gamma-glutamyl-phosphate reductase CYA_0653 661037 - 662572 + | hypothetical protein TERM 466 663553 - 663569 + G 100 -9.3 -5.0538 | CTGATCAGCCTGCAC GGCGGGG GAT CCCAGCC TTTTTTGGAGTGGCG CYA_0654 662803 - 663885 + | putative tocopherol cyclase TERM 467 664116 - 664139 + F 70 -9.6 -3.3879 | overlap 664114 664117 CCAGGCGCGTTACGA TCCCAGATGA TTTT TCGTCTGGGG TATTTACCGTCCCTT TERM 468 664431 - 664444 + G 74 -9.5 -3.87815 | opp_overlap 664429, overlap 664435 TCGAGAAAATTATTG GCCGG GGAT CCGGC TTTGTGGCCGTCGAG TERM 469 666239 - 666187 - g 78 -6.5 -4.62069 | gap 3, overlap 666235 GGTGGACTTCAAAAA CACCCTGATCGTGATGACC-TCGAAC ATTG GCTCGAAGGTCATCGAGA--AGGGTG GTGGCAGCCTCGGCT clpC 664229 - 666703 + | Clp protease, ATP-binding subunit ClpC TERM 470 666774 - 666743 - f 71 -11.7 -3.13403 | opp_overlap 666741 666743, overlap 666741 666746 TGGTTCTTAGGAAGA CAAGGGATCCG CTGCTGTTCT CGGATCCCTTG CTCTTGTCCTTCATC CYA_0657 666852 - 667484 + | ATP-dependent Clp protease-like protein CYA_0658 667502 - 668083 + | hypothetical protein clpP 668111 - 668722 + | ATP-dependent Clp protease proteolytic subunit TERM 471 669176 - 669207 + G 80 -5.8 -4.72986 | overlap 669164 CCCGGCCCGAAACCG GATCTGTTTCTCCA GAGG TGGAGCGGCTGATC TTTTTGCTCAAGCTG CYA_0660 668842 - 669264 + | hypothetical protein CYA_0661 669954 - 669298 - | hypothetical protein TERM 472 669589 - 669573 - G 79 -9.3 -4.17698 | AGTCAGACAGAGAAA GCTGCGC CAA GCGCTGC AGATCCTGAGAGGCA CYA_0662 670060 - 671454 + | malate dehydrogenase (oxaloacetate-decarboxylating) CYA_0664 671834 - 672505 + | hypothetical protein CYA_0663 674634 - 672502 - | ICE-like protease TERM 473 674442 - 674410 - G 71 -8.3 -3.84451 | CGGGTCAAAGCCAAA GCGATACCGCAGCAG CTC CCGCTGCAGCTCCAC ATCCGTGACACACCC CYA_0665 676173 - 675283 - | CAAX amino terminal protease family protein CYA_0666 677014 - 676304 - | hypothetical protein TERM 474 676793 - 676805 + g 74 -4.7 -4.56597 | opp_overlap 676793 ACAGCCCAGATCCAA GCAGG CTT CCCGC TTTTTGGGGGCGCGC CYA_0667 678011 - 677064 - | nucleotidyl transferase family protein zds 679594 - 678143 - | carotene 7,8-desaturase CYA_0669 679709 - 679605 - | hypothetical protein TERM 475 679823 - 679851 + r 95 -18.9 -3.07233 | overlap 679812 TCGATCCCTCACCCC CGTCCCCTCTCCC AAG GGGAGAGGGGAGG TGTTAGCGCTTGTAG CYA_0671 680588 - 679854 - | D-alanyl-D-alanine carboxypeptidase CYA_0672 681065 - 680628 - | anti-oxidant AhpCTSA family protein CYA_0673 681759 - 681136 - | HD domain-containing protein TERM 476 683284 - 683296 + H 74 -3.3 -4.91194 | opp_overlap 683275 TTCAAAGGGGACTTC CCCTA GCC TTGGG TTTTGTATTTGTTGT TERM 477 683324 - 683342 + H 81 -8.8 -4.42788 | TGTTCGTGGGCCAGG GGGAACCC TTT GGATTCCC TTTTATCGACTTGGG mgtE-1 683434 - 684870 + | magnesium transporter CYA_0676 684900 - 685172 + | hypothetical protein CYA_0677 685207 - 685908 + | mgtC family protein CYA_0678 686762 - 686139 - | hypothetical protein CYA_0679 687174 - 687296 + | hypothetical protein TERM 478 687290 - 687312 + F 85 -4.8 -5.28176 | CGGCAATGGCTCTGC TCATTAGAGC CGG GCGCTGGTGA TTTTTTATGGATCCC CYA_0680 687319 - 687720 + | hypothetical protein TERM 479 687905 - 687895 - f 71 -6.8 -4.19947 | CAAAATAACTATAAA GCTG GGC CAGC CTCTCCGACTCATCT CYA_0682 688002 - 688256 + | hypothetical protein CYA_0681 688795 - 688253 - | hypothetical protein CYA_0683 689640 - 688930 - | hypothetical protein TERM 480 689420 - 689430 + g 77 -2.4 -5.00616 | opp_overlap 689420 CAGCCCAAATCCAAA CAGG CTT CCCG TTTTTTGGGGGCACG CYA_0684 690649 - 689690 - | nucleotidyl transferase family protein TERM 481 690351 - 690331 - G 72 -7.5 -4.18018 | overlap 690332 TGTCTGCATTGAAAA CCACCAAGG GAT CCCCGGTGA AATAGGGCTGAGCCA CYA_0685 691106 - 691969 + | cystine ABC transporter, cystine-binding protein CYA_0686 692083 - 692787 + | cystine ABC transporter, permease protein TERM 482 692908 - 692895 - f 71 -4.5 -4.56775 | overlap 692897 692898 AGGGGGCTCCAAAAA CAGCC AGAA AGCTG GGGGACATCATCCTG TERM 483 694532 - 694497 - g 75 -11.9 -3.65351 | opp_overlap 694466 694495 694498, overlap 694498 TCAGGGCTACTGAAA GCCCG-CTCCGTACCGC TTTA GCGGT-CGGAGTCGGGT AGTTTACAGCAGAAA TERM 484 694498 - 694531 + G 79 -15.4 -2.90496 | opp_overlap 694497 694498, overlap 694466 694495 CAGGGCTACTGAAAG CCCG-CTCCGTACCGC TTTA GCGGT-CGGAGTCGGG TAGTTTACAGCAGAA TERM 485 694531 - 694498 - g 78 -15.4 -2.78996 | opp_overlap 694466 694498 694495, overlap 694497 CAGGGCTACTGAAAG CCCG-CTCCGTACCGC TTTA GCGGT-CGGAGTCGGG TAGTTTACAGCAGAA CYA_0687 693323 - 694534 + | ISSoc1, transposase TERM 486 696116 - 696100 - g 76 -5.8 -4.66609 | GAGGGGATCCAAAAA TGGCAG CAGAT CCGCCA GCGTTACGAGCAGGA sdhA 694687 - 696402 + | succinate dehydrogenase flavoprotein subunit TERM 487 697787 - 697797 + G 83 -5.4 -5.06451 | CGACCGACAGCGCGG GCTT TTG AAGC TTTTTTGCGCTGCTA CYA_0689 696542 - 697939 + | beta alanine--pyruvate transaminase TERM 488 697949 - 697983 + T 81 -12.9 -3.65351 | opp_overlap 697947 697950, overlap 697950 697976 CCTTAGTCGTAAACT ACCCGACTCCG-ACCGC TAA GCGGTACGGAG-CGGGC TTTCAGTAGCCCTGA TERM 489 697950 - 697982 + T 86 -16.4 -2.78996 | opp_overlap 697947 697950, overlap 697949 697976 CTTAGTCGTAAACTA CCCGACTCCG-ACCGC TAA GCGGTACGGAG-CGGG CTTTCAGTAGCCCTG TERM 490 697982 - 697950 - T 87 -16.4 -2.91695 | opp_overlap 697950 697949 697976, overlap 697947 CTTAGTCGTAAACTA CCCGACTCCG-ACCGC TAA GCGGTACGGAG-CGGG CTTTCAGTAGCCCTG CYA_0690 699204 - 698056 - | ISSoc1, transposase TERM 491 698325 - 698347 + g 74 -12.6 -3.26767 | overlap 698318 698324 AACTGTTGGCCCTGC GCCGCTCGGC TTT GCTGCGCGGC TGTTGATTGACTCTT CYA_0691 699639 - 699490 - | hypothetical protein CYA_0693 699774 - 701018 + | GTP-binding domain-containing protein lipA-1 701869 - 701015 - | lipoyl synthase CYA_0694 702585 - 702091 - | hypothetical protein CYA_0695 703287 - 703051 - | hypothetical protein CYA_0696 703721 - 704017 + | hypothetical protein CYA_0697 703998 - 704966 + | MazG family protein TERM 492 705030 - 705008 - f 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG CYA_0698 705228 - 705359 + | hypothetical protein CYA_0699 705467 - 706513 + | 2OG-Fe(II) oxygenase family oxidoreductase CYA_0700 706635 - 707576 + | putative protease CYA_0701 707669 - 708175 + | hypothetical protein CYA_0702 710911 - 708185 - | polyA polymerase family protein TERM 493 709231 - 709208 - G 72 -3.7 -4.56358 | GATATCCACACAAAA GCCGCCTGG CCAGAT CAAGGCCGC CGTTTGGAATTTGCC TERM 494 709259 - 709279 + g 73 -11.1 -3.58533 | overlap 709261 GCCGTGGATCTCCAG CCGCGCTTC CGG GAAGCGCTG TTTGAGCGCTTGTCC TERM 495 709261 - 709277 + g 72 -12.3 -3.36837 | overlap 709259 CGTGGATCTCCAGCC GCGCTTC CGG GAAGCGC TGTTTGAGCGCTTGT TERM 496 711042 - 711059 + r 70 -3.3 -4.83169 | overlap 711043 CCTCGAAGCTAAGTT TCAGGAC GGGT GTCCGGG TTTTTATCAAAAAAT frr 711695 - 711147 - | ribosome recycling factor TERM 497 711641 - 711659 + g 76 -7.4 -4.25056 | overlap 711621 CCGTATTAAAGGAGC GCTGTGTG GCT TGCACAGC TTTGTTCATCAACTC TERM 498 712463 - 712431 - g 83 -16.4 -2.92667 | opp_overlap 712431 712432, overlap 712428 GGAACTTGTAAACTA CCCGGCTCCG-ACCGC TAA GCGGTACGGAGC-GGG CTTTCAGTAGCCCTG TERM 499 712431 - 712464 + G 77 -13.1 -3.65351 | gap 1, opp_overlap 712431 712428, overlap 712432 GGAACTTGTAAACTA CCCGGCTCCG-ACCGC TAA GCGGTACGGAGCGGGC TTTCAGTAGCCCTGA TERM 500 712432 - 712463 + G 81 -16.6 -2.78996 | gap 1, opp_overlap 712431 712428, overlap 712431 GAACTTGTAAACTAC CCGGCTCCG-ACCGC TAA GCGGTACGGAGCGGG CTTTCAGTAGCCCTG CYA_0705 711934 - 712473 + | hypothetical protein CYA_0704 713638 - 712445 - | ISSoc1, transposase CYA_0706 714350 - 713715 - | hypothetical protein TERM 501 714255 - 714242 - G 72 -4.5 -4.63486 | gap 1, overlap 714243 ACGTCCCCAAGAAAA CCCAGC GGC GC-GGG TGTCGCATAGCCAGA CYA_0708 714927 - 715322 + | hypothetical protein CYA_0707 715768 - 715289 - | hypothetical protein TERM 502 715597 - 715549 - G 82 -11.1 -4.09864 | gap 3 ATCCATCCGCCAAAA GCG-GGATCCCGACCACCACCACG GTGG CTTGGCGGCGG-CGG-ATCCACGC CTGCACTTGGGCGAT TERM 503 717030 - 717009 - g 78 -6.5 -4.57569 | gap 1 GTACCTGGTGAAAAA CCGTGGCCGC CTG GCG-CCAGGG CTGCACCCCATTCCG ahcY 715879 - 717159 + | S-adenosyl-L-homocysteine hydrolase argG 718511 - 717300 - | argininosuccinate synthase CYA_0711 718953 - 718783 - | hypothetical protein CYA_0712 719078 - 719575 + | hypothetical protein TERM 504 719609 - 719630 + F 70 -10.2 -3.25162 | overlap 719605 719604 CGATCGATCTGGAAG GCGTCCAT GCCACA ATGGACGC TATCTCTTCTTTCTC lipA-2 719654 - 720526 + | lipoyl synthase CYA_0713 721737 - 720523 - | GTP-binding domain-containing protein CYA_0715 721730 - 721882 + | hypothetical protein CYA_0716 721907 - 722056 + | hypothetical protein CYA_0717 722156 - 722287 + | hypothetical protein aroQ 722265 - 722768 + | 3-dehydroquinate dehydratase CYA_0719 723548 - 723012 - | thioredoxin TERM 505 725216 - 725201 - g 70 -10.4 -3.58522 | overlap 725211 AGGAGCACCTGCAAA GCCAGG AAAC CCTGGC CCAACAGCAGCAGCA TERM 506 726186 - 726160 - g 70 -10 -3.54741 | CACGAGCTGCGCAAA GCCCAGGAGCGC CGC GCCCGCCTAGGC GAGCAAATCGCCTCC CYA_0721 723925 - 727215 + | SbcC family exonuclease CYA_0720 727643 - 727212 - | hypothetical protein TERM 507 727389 - 727371 - G 81 -6.6 -4.77036 | CCGGATCACCAAAAA GCCCACCG GCT CGATGCGC ACCCCGCCCCCCGCT TERM 508 727772 - 727817 + r 70 -10.3 -3.28791 | gap 1, overlap 727775 CCCCGCGCCGCTGCC CTTACCCCTG-GCCCCTCTCCC TGA GGGAGAGGGGAGTTGGGGATAG TTCTCGGCGCCAAAT TERM 509 727903 - 727931 + r 81 -2.9 -5.19212 | opp_overlap 727901 727902, overlap 727902 CGACACCGAGAAAGG GGGAGCTCCTGCG CCG CTCTTGAACTCCC TTTTTTAGTCCTCGT CYA_0722 728202 - 727936 - | hypothetical protein CYA_0723 728519 - 728199 - | hypothetical protein CYA_0724 730068 - 728569 - | CobN/magnesium chelatase domain-containing protein TERM 510 728772 - 728749 - G 72 -3.8 -4.56597 | overlap 728750 GTGGTTGCGCAAAAA CTGCTGCACC CGGG GATCCAGCAA GTAGGCGCGGGCCAG TERM 511 729827 - 729804 - G 75 -13.8 -3.01712 | GCCCGGTGGGCAACA CCTCCACCCG GCCC CGGGTGGGGG CACCGGAAGGGCCGC tal 731264 - 730086 - | transaldolase/EF-hand domain-containing protein TERM 512 730299 - 730313 + g 76 -5.6 -4.57073 | overlap 730301 CTCCAGCTTCTGCAG CCGCTC GGT GAGCAG TTTTTCCAGCACCTC TERM 513 731043 - 731000 - G 71 -5 -4.43844 | opp_overlap 731034, overlap 731001 731013 GGATGATGGACAAAA TGCGCACGCCAAAGGCCACC GCCA GTTGGTCGATGGCGTGGGCC ACCACGGCTTTGGTG TERM 514 731414 - 731391 - R 70 -11 -3.04461 | CATTTACGCTGAACA CTGCTGAGCA TTAC TGCTCAGCGG TGAAGCGATAGCATT CYA_0726 732659 - 731379 - | ISSoc2, transposase CYA_0727 733107 - 732514 - | ISSoc2, resolvase cas2-2 734001 - 733729 - | CRISPR-associated Cas2 family protein cas1-1 734948 - 734001 - | CRISPR-associated Cas1 family protein cse3 735607 - 734975 - | CRISPR-associated Cse3 family protein cas5e 736212 - 735589 - | CRISPR-associated Cas5 family Ecoli subtype protein cse4 737358 - 736216 - | CRISPR-associated Cse4 family protein cse2 738024 - 737425 - | CRISPR-associated Cse2 family protein cse1 739610 - 738036 - | CRISPR-associated Cse1 family protein TERM 515 738433 - 738423 - G 71 -5.4 -4.52589 | opp_overlap 738423 CTCTGCTAGAGAAAA GTAG GGG CTAC CTTTAGAAGATCGAA TERM 516 738917 - 738935 + g 70 -7.4 -4.06055 | overlap 738926 GGATCTCTTTTTTCG GTTGGCCA GTG TAGCCAAC TTTGGTTTCCCAGGT cas3 742308 - 739627 - | CRISPR-associated helicase Cas3 TERM 517 740590 - 740572 - G 86 -6.6 -5.06816 | overlap 740574 ATCTTTGAATAAAAA GCGCCCGT GAA ACAGGCCC AATTCTTCCGGCGGA CYA_0736 743219 - 742311 - | hypothetical protein CYA_0737 743274 - 743990 + | ISSoc8, transposase, interruption-N TERM 518 743985 - 743973 - Tf 72 -10.5 -3.48276 | opp_overlap 743972 743973, overlap 743956 CTCTCTGGGAGAGAA CGGCG CTA CGCCG CTTGATAATACAAAT CYA_0738 745221 - 745048 - | hypothetical protein CYA_0739 744741 - 745103 + | ISSoc8, transposase, interruption-C TERM 519 745117 - 745085 - GT 85 -12 -3.87994 | opp_overlap 745083 745086, overlap 745086 AGGGATTGGGATAAA GCCCG-CACCCTGCGC ATA GCGC-GGGTGTCGGGT AGTTTACTTACCTCC TERM 520 745086 - 745116 + gT 83 -15.5 -3.02881 | opp_overlap 745086 745085, overlap 745083 GGGATTGGGATAAAG CCCG-CACCCTGCGC ATA GCGC-GGGTGTCGGG TAGTTTACTTACCTC TERM 521 745116 - 745086 - GT 83 -15.5 -2.92475 | opp_overlap 745083 745086, overlap 745085 GGGATTGGGATAAAG CCCG-CACCCTGCGC ATA GCGC-GGGTGTCGGG TAGTTTACTTACCTC CYA_0740 746318 - 745386 - | RluA family pseudouridine synthase TERM 522 746265 - 746282 + g 72 -2.6 -4.67755 | TGCCAACCCCCGATC CAGCCG CAAGCC CTGCTG TTTTTCCGTCACTGT TERM 523 747759 - 747746 - g 79 -9.5 -4.11216 | GGTGCAGTCCCAAAA GGCGG CCAA CCGCC TCAAGACCTATCGCT ppsA 746652 - 749111 + | phosphoenolpyruvate synthase TERM 524 749269 - 749255 - g 78 -7 -4.56597 | overlap 749256 CGCCTGGCTGAAAAA CCCCGG CGA CCGGGT GGAGAAAGGGGAAAA CYA_0742 749181 - 750440 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 525 751517 - 751540 + G 73 -8.8 -4.0896 | overlap 751519 GCGGTTCTGGAGGGG GTTCTGGGCC AGCT GGCTCAGATC TTTTGCCGGCAATTT TERM 526 751519 - 751538 + G 70 -10 -3.63922 | overlap 751517 GGTTCTGGAGGGGGT TCTGGGCC AGCT GGCTCAGA TCTTTTGCCGGCAAT CYA_0743 750971 - 752635 + | putative lipoprotein TERM 527 752918 - 752931 + T 76 -6.7 -4.60713 | overlap 752917 TGCCTATTAGTTAGA CTGCT CTGC AGCAG TTTTGTCCTCTTTTG CYA_0744 753541 - 752909 - | NADH dehydrogenase subunit I CYA_0745 754698 - 753577 - | NADH dehydrogenase subunit H TERM 528 754312 - 754300 - G 81 -2.6 -5.1356 | GGCGATCAAGAAAAA CACC CCGAT GGCG ATGTTGGAGATCAAT CYA_0746 754963 - 754760 - | hypothetical protein TERM 529 754856 - 754869 + g 91 -9.5 -4.49316 | overlap 754855 GTCGGATAACTCTTC GGCGC GGCG GCGCC TTTCTTCTTGGTACT CYA_0747 756178 - 754994 - | NAD(P)H-quinone oxidoreductase subunit H CYA_0748 756346 - 756663 + | hypothetical protein CYA_0749 757312 - 756755 - | carboxymuconolactone decarboxylase family protein TERM 530 756997 - 757036 + g 76 -6.2 -4.59773 | gap 1, overlap 756998 757000 GGGCGCTGGTGCGGG CCTGG-GCCACCGCGGCAA TTT TGGCCGGGGAGGCGCCGTG TTTTTGCGCCTGCAG CYA_0750 757637 - 757386 - | hypothetical protein TERM 531 758861 - 758845 - g 75 -2.9 -4.83615 | TAGCCGCCAGAAAAA GCTCTGG CTG CAAGAAC ACATCGATCTCCGCT ureD 758348 - 759151 + | urease accessory protein UreD TERM 532 759732 - 759755 + G 78 -6.7 -4.56597 | overlap 759733 GAATACTTGGCCAGC GTCGATCCC AAAGAC GGGATCGAA TTTTTCCAGGCCCGG TERM 533 759823 - 759833 + G 77 -2.4 -5.06451 | TCGGCGAGAGCGGCA GCCC CGT GGAC TTTTTTCCGCTGCTG TERM 534 760059 - 760076 + G 71 -8.3 -3.86822 | CTGGAGCGGGTCCGG GCCCAGG TAAG CCAGGGC TTTGTCACCAACTTC CYA_0754 759189 - 760703 + | hypothetical protein CYA_0756 762491 - 760890 - | dolichyl-phosphate-mannose-protein mannosyltransferase TERM 535 762255 - 762235 - G 78 -10.3 -4.08485 | opp_overlap 762247 GGGATGGAAAGCAAA GCCGCCAGG ATC CCGGGCAGC CGCGCCGCCCACTCG CYA_0757 763470 - 762688 - | hypothetical protein CYA_0758 764027 - 763464 - | hypothetical protein ftsY 765707 - 764247 - | signal recognition particle-docking protein FtsY TERM 536 764444 - 764460 + g 72 -7.9 -4.19953 | opp_overlap 764439 764441, overlap 764445 CTTCGGCAAACACCT GGGCCTG GCG CAGGCCG TTTTGCCCTTGGGTA purU 766650 - 765802 - | formyltetrahydrofolate deformylase TERM 537 766592 - 766608 + g 75 -4.3 -4.72272 | overlap 766593 TAGATGAAGTTGGAG AGCTTGG CTA CCAGGCC TTTTTGATCGGGACA TERM 538 766856 - 766876 + r 71 -6.7 -4.27316 | ACTCGAGGGGTTTTG GCCGTGCTG CTG CAGCCAGGC TTTTGCATTCGCCAG tatA-1 767290 - 766952 - | twin-arginine translocation protein TatA TERM 539 767333 - 767350 + H 70 -5.5 -4.42386 | GCCTGACATCTTCTT GCCCTTG TCCG CAAGCGC TTTTCTCCCTCCAAG TERM 540 768780 - 768792 + G 83 -9.1 -4.25104 | overlap 768773 GCCCACATGCACGCC CAGGG GCG CCCTG TTTTGGTGGGAACCA TERM 541 768865 - 768853 - g 74 -9.1 -3.91084 | CCATGCTCAAGGAAA TGGGG ATC CCCCA CAACCTCCTCAACGC TERM 542 769489 - 769514 + G 75 -3.9 -4.72986 | gap 1, overlap 769489 769490 GGGGCCGCGCCGGAC G-GCAAGGAGAC CCT GGCTCCTCGCGC TTTTTCCTCAGCCTA TERM 543 770329 - 770289 - g 74 -13.1 -3.30771 | overlap 770290 CCACAGGTGGCACAA GCCGTCCCGGCGCAGGCAG TGG CTGCCAGCCCCGAGACCGG TGGGGTGGTGGAGGC TERM 544 770328 - 770290 - g 80 -16.6 -2.58249 | overlap 770289 CACAGGTGGCACAAG CCGTCCCGGCGCAGGCAG TGG CTGCCAGCCCCGAGACCG GTGGGGTGGTGGAGG secA 767499 - 770363 + | preprotein translocase subunit SecA TERM 545 770424 - 770407 - T 72 -6.2 -4.42238 | TCAGCGTAAGGAAAA GCCCCG ACAAGG CGGAGC AATAGCCAGAAGGGA CYA_0763 771204 - 770446 - | pspA/IM30 family protein CYA_0764 771949 - 771239 - | putative polysaccharide deacetylase TERM 546 771893 - 771880 - G 75 -3.7 -4.72986 | overlap 771867 GAGCCTCAGGAAAAA GGGTC TTGA GGCCC TGCTGCAGAAGGGGG CYA_0765 774466 - 771959 - | U32 family peptidase TERM 547 772523 - 772509 - G 75 -3.4 -4.86621 | overlap 772510 ACGTTCAAGGAAAAA TCGCCG ATG CAGCGC TGGTTGGCGAAAAAG TERM 548 774503 - 774491 - R 74 -4.8 -4.72201 | CCTGAGAAAAAACAA GGGA TCCTC TCCC ATTCAAAAGCAAAAA TERM 549 774548 - 774520 - R 91 -6.8 -5.46698 | TTCAAAAGCAAAAAA CCTGAGAGC-AGGA TCC CCCTTGC-CTCAGG CCAAGCCCTACTGCC CYA_0766 774748 - 774623 - | hypothetical protein TERM 550 774766 - 774799 + r 81 -13.1 -3.65351 | gap 1, opp_overlap 774755 774763 774766, overlap 774767 ACCACGCGTAAACTA CCCGGCTCCG-ACCGC TAA GCGGTACGGAGCGGGC TTTCAGTAGCCCTGA TERM 551 774798 - 774766 - R 87 -16.4 -2.91873 | opp_overlap 774766 774767, overlap 774755 774763 ACCACGCGTAAACTA CCCGGCTCCG-ACCGC TAA GCGGTACGGAGC-GGG CTTTCAGTAGCCCTG TERM 552 774767 - 774798 + r 86 -16.6 -2.78996 | gap 1, opp_overlap 774755 774766 774763, overlap 774766 CCACGCGTAAACTAC CCGGCTCCG-ACCGC TAA GCGGTACGGAGCGGG CTTTCAGTAGCCCTG CYA_0767 775973 - 774780 - | ISSoc1, transposase sixA 776698 - 776204 - | phosphohistidine phosphatase SixA trx-1 776958 - 777299 + | thioredoxin CYA_0770 777430 - 778500 + | hypothetical protein trpF 778523 - 779203 + | N-(5'-phosphoribosyl)anthranilate isomerase CYA_0772 780056 - 779226 - | hypothetical protein CYA_0773 780984 - 780166 - | RNA pseudouridine synthase family protein CYA_0774 781538 - 781029 - | hypothetical protein CYA_0775 781527 - 781706 + | hypothetical protein rbfA 782347 - 781898 - | ribosome-binding factor A TERM 553 782333 - 782346 + g 77 -2.3 -5.04175 | TACCCGTGCCACCCG TCGCG CTGT CGCCA TTTTTCTGTCCTTAG CYA_0777 783770 - 782541 - | ISSoc5, transposase CYA_0778 783953 - 784174 + | hypothetical protein CYA_0779 784113 - 784265 + | hypothetical protein TERM 554 784336 - 784361 + G 72 -4.5 -4.67038 | opp_overlap 784317 784315, overlap 784317 CCTCCATGGGGCAGC CCAGCGCAGCC CCCA GGTAGTGCCGG TTTTCGTTTTCGACC TERM 555 784612 - 784632 + G 78 -3.1 -5.06414 | GGTGCGGGCCAGCTT GGCGGAAGC TGG GATCCCGTC TTTTTCTTACCAAGA TERM 556 785142 - 785160 + G 79 -8.1 -4.26903 | gap 1 GGCCCCACGTGGAGA GCGGCGCC TATC GGCG-CGC TTTTGATGCGCTGGA phrB-2 784262 - 785701 + | deoxyribodipyrimidine photolyase TERM 557 785841 - 785823 - T 100 -10.3 -5.27335 | TTGCGTAAATAAAAA GGGGATC GCCGG GATCCCC TCCGTCCCCAGAAGT CYA_0781 787233 - 785884 - | alkaline phosphatase TERM 558 787176 - 787164 - G 82 -3.3 -5.15634 | CACTGGAGGAAAAAA CTGAC GAG GACAG CAGACACAAAGTTGC CYA_0782 789847 - 787481 - | putative membrane-bound protease TERM 559 788484 - 788468 - G 85 -3.5 -5.27335 | overlap 788469 788478 788479 GTGGGTAAACAAAAA GGCCTCC AAA GGCGGCT CGGCCCCGGGATCCG TERM 560 789218 - 789200 - G 74 -11.7 -3.53224 | GACTTCTTCGGCAAA GCCGGTG GTCAT CACCGGC GAGCGGGCCTGCCGG CYA_0783 790077 - 789979 - | hypothetical protein TERM 561 790555 - 790539 - gR 91 -3.5 -5.47218 | opp_overlap 790539 GGTGAGGGAAAAAAA GGGCACC CAT GCAGCCC TCTTGCAGAGCTTGC uvrA 790054 - 792954 + | excinuclease ABC subunit A CYA_0785 794243 - 793050 - | coproporphyrinogen III oxidase dnaK-2 795580 - 797388 + | molecular chaperone DnaK TERM 562 797378 - 797405 + F 74 -7.6 -4.27617 | GGAGTGAGATCTATG GCACTCGCTGAG GATA CTCGGCGAAGGC TTTTGCTCAGCTCTG dnaJ 797505 - 798689 + | chaperone protein DnaJ CYA_0789 798686 - 798949 + | hypothetical protein TERM 563 799109 - 799098 - g 70 -7.2 -4.07568 | overlap 799099 TTTCCCGGCCCAAAA GCCG ATGC CGGC GGAGCTTCTCTGCAC rsgA 798946 - 800037 + | ribosome small subunit-dependent GTPase A CYA_0791 800172 - 801692 + | hypothetical protein CYA_0792 801679 - 801798 + | hypothetical protein CYA_0793 802085 - 803077 + | pentapeptide repeat-containing protein TERM 564 803527 - 803547 + G 73 -3.1 -4.71186 | overlap 803516 CCCTCTCCTGCCGCG GGATCCACT GGT GGAGGAGCC TTTTCTGTTGCTGCT TERM 565 804157 - 804172 + G 72 -4 -4.56597 | gap 1, opp_overlap 804157 GTGCACCGAGCAAAT CA-ACCG TTT CGGTCTG TTTTTCCAGGCCACA TERM 566 804290 - 804274 - g 76 -9.4 -4.07568 | CTTGGTGCGGCAAAA CCTGCC CCGCT GGCAGG AACAGGTGGAACGGC CYA_0794 803159 - 804700 + | sensor histidine kinase TERM 567 805414 - 805428 + G 100 -10 -5.00884 | CCTGAGAACCTGGAG CGGATC TTC GATCCG TTTTTTCGCGCCGAT CYA_0795 804796 - 805575 + | sensor histidine kinase CYA_0796 805640 - 806377 + | DNA-binding response regulator CYA_0797 808078 - 806399 - | hypothetical protein TERM 568 806835 - 806857 + g 86 -7.6 -4.69664 | opp_overlap 806835, overlap 806837 AGCCGATCCAACTGA GTCAGGGCCG CGT TGGCCTTGTC TTTTTGGCTGGTCTC TERM 569 806837 - 806855 + g 71 -8.8 -3.95883 | opp_overlap 806835, overlap 806835 CCGATCCAACTGAGT CAGGGCCG CGT TGGCCTTG TCTTTTTGGCTGGTC TERM 570 807371 - 807357 - G 79 -9.2 -4.23892 | opp_overlap 807357 TTGAAGTAGGCAAAA GCCAGG GTG CCCGGC TTCTGGTAGAGATCG rnhA 808642 - 808142 - | ribonuclease H TERM 571 808582 - 808567 - G 72 -4 -4.56597 | gap 1 CCCCGTCGGTAAAAA TGCCACT AGG AG-GGCA ATCGGCCAGCCGTGG TERM 572 808818 - 808800 - R 100 -11.7 -5.07486 | CAGCGCGAATAAAAA CCCCCAG AAAAG CTGGGGG AGGAGTGGTGTGTTG CYA_0799 810159 - 809059 - | DRTGG domain-containing protein TERM 573 810263 - 810244 - R 70 -10 -3.53012 | gap 1 GCCGCTTGGGGGAAA CCTCGG-GG CTG CCTCCGAGG GAAGCTGGAGATTTC CYA_0800 811815 - 810358 - | Trk family K(+) transporter TERM 574 811228 - 811212 - G 82 -5.7 -4.86033 | overlap 811213 811214 AAATTGCCAGAAAAA CCGCCCG ACC CGGGCCA TAGAGATCCCGCCAG CYA_0801 812486 - 811827 - | Trk family K(+) transporter clpX 813909 - 812563 - | ATP-dependent protease ATP-binding subunit TERM 575 814160 - 814138 - R 100 -12.7 -4.78839 | opp_overlap 814137 AAGTTGATAAGAAAA CCGCCCGAC TCGAC GTCGAGCGG CGGATGGTGTGAGGA TERM 576 814356 - 814322 - R 76 -5.1 -4.77036 | gap 1 CTTGAGCACCAAAAA GGGGAAG-GGAC TGTCCGTGTTTC GTCCTCTTCCCC CTCTGGCGTCCACTC ligA 816473 - 814452 - | DNA ligase, NAD-dependent TERM 577 816595 - 816574 - R 71 -4.4 -4.62471 | CCTAACCCCCAAAAA GCTGGG CAATGCAGAT CCCAGC TTGCAGCTGCAGGCG rnc 817436 - 816711 - | ribonuclease III TERM 578 816750 - 816774 + g 72 -4.2 -4.56597 | overlap 816750 816749 816757 GTGCCCGTAGGCTTG GGCCGCAG CGGCCATTT CTGCCGCC TTTTTGGAGCGCCCC CYA_0805 817528 - 817860 + | hypothetical protein CYA_0806 818223 - 817918 - | hypothetical protein CYA_0807 819443 - 818226 - | ISSoc2, transposase CYA_0808 819891 - 819298 - | ISSoc2, resolvase mutY 821119 - 820043 - | A/G-specific adenine glycosylase TERM 579 821570 - 821545 - R 73 -12.5 -2.68612 | opp_overlap 821564, overlap 821542 AGTTAGAGCACAGGA GCCGCCCAGGC AGAG GCTTGGGCAGC CAACTTCCCTGCTAT TERM 580 821668 - 821650 - R 88 -10.2 -4.43844 | CCAGCAGGTATAAAA GGTGCCCT CCC AGGGCTCC GCGCCGCCTAGGCGG CYA_0810 822037 - 821705 - | hypothetical protein TERM 581 821892 - 821842 - G 71 -13.8 -2.64155 | opp_overlap 821850, overlap 821838 821847 TTTGGTTTAAAGTGA CCACAGCACTGCCGCTGGCGGAGC TGG GCACCGCTACCGGCGGTACTTCGG CAGCAGGAGATAGGG TERM 582 821887 - 821847 - G 70 -13.1 -2.84732 | opp_overlap 821850, overlap 821842 821838 TTTAAAGTGACCACA GCACTGCCGCTGGCGGAGC TGG GCACCGCTACCGGCGGTAC TTCGGCAGCAGGAGA TERM 583 821850 - 821884 + g 78 -15.6 -2.70932 | opp_overlap 821847 821842 821838 AAAGTGACCACAGCA CTGCCGCTGGCGGAGC TGG GCACCGCTACCGGCGG TACTTCGGCAGCAGG TERM 584 822027 - 822012 - G 76 -6.2 -4.59109 | CAGACGCCCCAAAAA GTTTTG AAGA CAAAAC GAGGCCGCAAGGCCG TERM 585 823322 - 823341 + G 74 -4.8 -4.60487 | AGGGGCGAATGCTCA GCCGCCGC AGCC GCGACCGC TTTTTGGACATCCTC CYA_0811 822469 - 823629 + | carboxylesterase TERM 586 823708 - 823694 - f 75 -5.7 -4.62069 | GTTGGATCTTAAAAA GTTGG ATCAG CCAAC ATCCAAGCCAGAACG CYA_0812 823732 - 824013 + | S4 domain-containing protein TERM 587 824535 - 824549 + G 73 -6.4 -4.30978 | TGCGTCCCCTCAGCC TCCTGT GCA GCAGGA TTTTCCTCCCTTGCC TERM 588 824873 - 824911 + G 72 -7.3 -4.20696 | gap 1, overlap 824885 TTTCCTGGTATGTCT CGGTGGCCAGCGGCGCTG CCCT CAGCGCTTTCGGCC-TCG TTTTCCAGTTGCTGC TERM 589 824885 - 824900 + G 70 -10.4 -3.60431 | overlap 824873 TCTCGGTGGCCAGCG GCGCTG CCCT CAGCGC TTTCGGCCTCGTTTT CYA_0813 824515 - 825198 + | putative membrane proteinprotein TERM 590 825733 - 825757 + G 81 -9.9 -4.19472 | GCGTCTGGAAGGGTT CTTGCCGGGGG CCG TCGCCGGCGAG TTTTGGGATCTGTTG CYA_0814 825281 - 825838 + | hypothetical protein aspC 825882 - 827066 + | aspartate aminotransferase CYA_0816 827229 - 827486 + | hypothetical protein cefD 829654 - 830793 + | isopenicillin N-epimerase CYA_0819 830790 - 830894 + | hypothetical protein CYA_0820 830936 - 833575 + | radical SAM domain-containing protein TERM 591 834010 - 833990 - f 72 -9.7 -3.55783 | AAAAGGTAAGCAGAA CCTTGGAAC TTT GCCCCAAGG AACTGTCCAGAGGCG TERM 592 834531 - 834512 - f 90 -5 -5.40072 | gap 1, overlap 834513 TTCTGGCTAAAAAAA CTTGAGCGG ATC CCGC-CAAA AGGACAGCGCCTCGC CYA_0821 834601 - 836736 + | ribonuclease rnhB 836795 - 837460 + | ribonuclease HII CYA_0824 838040 - 837615 - | hypothetical protein TERM 593 837676 - 837695 + g 72 -2.1 -4.7173 | TGGCCTCCTGCTGCT GGCAC GGCCTGGATG GTGCC TTTTTCGATGTGATA gvpJ 838448 - 838116 - | gas vesicle protein J gvpN 839372 - 838488 - | gas vesicle protein GvpN gvpC 840459 - 839461 - | gas vesicle structural protein GvpC TERM 594 840521 - 840543 + r 77 -11.3 -3.62597 | gap 1 TTTTTACTTTGACAC TCCCACCGCC TAAA GGCGG-GGGA TTCTTACGCAGTCCA CYA_0828 841071 - 840868 - | hypothetical protein TERM 595 841043 - 841009 - G 76 -11.5 -3.80858 | CCAGAACTGAGCAAA GCGAGGCAGAGAC TCTACCCTG GTCCCTGCCTCAC TAGCCACCTGCTTCG gvpA 841350 - 841132 - | gas vesicle synthesis protein GvpA TERM 596 841474 - 841493 + H 74 -3.4 -5.00616 | overlap 841475 CGCCCCTTGTATCAC CCCAGCCC CATT GTGCTGGC TTTTTTCGGGGAGAA CYA_0830 841733 - 841951 + | hypothetical protein TERM 597 841968 - 842001 + F 79 -8.2 -4.41348 | gap 1 CCCAAACCCCTGCAG CCCTTGGCCGTCG CTGGCTTCC CGGCGG-CAAGGG TTTCTTTGGCGCACC CYA_0831 842103 - 842786 + | V4R domain-containing protein CYA_0832 842783 - 843034 + | hypothetical protein CYA_0833 843080 - 843559 + | hypothetical protein TERM 598 844085 - 844095 + G 86 -8.2 -4.56597 | CCCCCCACTTCAAGC GCCC GAT GGGC TTTTTGGAGGCAGGG CYA_0834 843616 - 844305 + | V4R domain-containing protein aroH 844397 - 844771 + | chorismate mutase CYA_0835 845169 - 844768 - | hypothetical protein CYA_0837 845336 - 846118 + | hypothetical protein ppc 849187 - 846251 - | phosphoenolpyruvate carboxylase CYA_0839 849567 - 849310 - | hypothetical protein TERM 599 849635 - 849610 - H 72 -9.7 -3.5594 | AAGGTAGCGCGCAAA CCCCTCTCCGA GAAG TCGAAGATGGG CGATGAGGGGCTAGA TERM 600 849732 - 849709 - H 81 -8.8 -4.46212 | gap 1, opp_overlap 849711 849713, overlap 849713 TTGCCGAGGATAAAA GCAAGCCCCCC GTG GGGGGGCT-GT TTCTTCAGCTCCTGA TERM 601 849711 - 849731 + H 91 -12.5 -4.18934 | opp_overlap 849709 849713, overlap 849713 GCCGAGGATAAAAGC AAGCCCCCC GTG GGGGGGCTG TTTCTTCAGCTCCTG TERM 602 849713 - 849729 + H 90 -15.1 -3.69068 | opp_overlap 849709 849713, overlap 849711 CGAGGATAAAAGCAA GCCCCCC GTG GGGGGGC TGTTTCTTCAGCTCC TERM 603 849729 - 849713 - H 95 -15.1 -3.77302 | opp_overlap 849713 849711, overlap 849709 CGAGGATAAAAGCAA GCCCCCC GTG GGGGGGC TGTTTCTTCAGCTCC TERM 604 850362 - 850335 - H 77 -7.8 -4.45738 | gap 1 CAGTTGAACAATAAA CCCTTT-CTCCCC AGA AGGGAGCAAAGAG AAATAGGGTATCGAT TERM 605 850591 - 850575 - H 71 -8.7 -3.71672 | overlap 850571 850577 CTTCACCAAAAGGAA TACTCGC GGG GCGAGCA GCCTTTGGAGAGGGT CYA_0841 850888 - 851364 + | hypothetical protein CYA_0840 851761 - 851354 - | sensor histidine kinase TERM 606 851826 - 851853 + H 79 -8.6 -4.4017 | opp_overlap 851828 GTCTCTCCAGGATGA GATCCTAGAA TTGGAGTC TTCTAGGATC TTTTCTGGGACTTGA CYA_0842 851871 - 852020 + | hypothetical protein TERM 607 852309 - 852352 + G 72 -7.4 -4.2142 | gap 1, opp_overlap 852319 852320 852321, overlap 852320 852321 852322 CGAATGCAATCCTCC CCCAAAGAAATTGCCCGCGGC CTG GCGGCGGG-AGTTTTTGCGGG TTGTTTTCCCATCTT TERM 608 852320 - 852342 + G 78 -6.8 -4.64144 | opp_overlap 852320 852319 852321, overlap 852309 852321 852322 CTCCCCCAAAGAAAT TGCCCGCGGC CTG GCGGCGGGAG TTTTTGCGGGTTGTT CYA_0843 852141 - 852719 + | hypothetical protein TERM 609 852757 - 852732 - f 79 -9.7 -4.07885 | TAGGGCGGCTCAAAA GGCCCAACCCA AAGC TGAGCTAGGCC GGGATCCCTGCCGCC map-1 852908 - 853696 + | methionine aminopeptidase TERM 610 854174 - 854158 - g 76 -9.3 -4.07568 | CCTGCTGGGGCAAAA CCTGCGC CTT GCGCGGG AGCGGGTGCAACTGT TERM 611 854233 - 854251 + G 72 -3.7 -4.59773 | GGCGGCGGGGTTTAA CGCGCCG ATTGC CGGGGTG TTTTTGGCGCTGGAG TERM 612 854352 - 854371 + G 75 -4.2 -4.72272 | TGATTGCCCAGGTGG GGCTGG GGGCGCAG CCGGCC TTTTTGCTGCCGACC TERM 613 854744 - 854766 + G 95 -9.8 -4.44667 | GTGGGCAGCGGCTTT GTCGGGGGAA CCT TTGCCCCGGC TTTGTTCTTGGGAGC CYA_0845 853703 - 855547 + | chloride channel (ClC) family protein CYA_0846 856219 - 855551 - | base excision DNA repair protein murG 857447 - 856359 - | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase TERM 614 856648 - 856616 - G 71 -6.2 -4.26903 | gap 1, overlap 856641 856642 GGTAGGGGATCAAAA TGGCCGGGGTGGCGG TGGC CCACAACTCCG-CCA AGCTGAGAGCGCCAG TERM 615 856769 - 856726 - G 74 -5.1 -4.54727 | gap 1, overlap 856727 856728 GCGCGGAAAGGAAAA GCGCGGTAGCGGGGGTGGGA AGGGA TCCCGACCTCACTGCCGC-C GGTCAAATGCACAAT CYA_0848 858429 - 857455 - | Ycf48-like protein CYA_0849 858764 - 858459 - | rubredoxin CYA_0850 859234 - 859644 + | FHA domain-containing protein CYA_0851 860073 - 860210 + | hypothetical protein TERM 616 861100 - 861086 - g 71 -9.2 -3.78775 | overlap 861087 CCCGTGATCATCAAA GCCACC GCC GGCGGC GGGGGGCGGGGCATG accC 860606 - 861961 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 617 862368 - 862385 + G 77 -2.6 -5.08824 | overlap 862370 ACCTACAACCTCAAG CGGCTG GCGCTG CAGCAG TTTTTTGAGTGGGCC TERM 618 862735 - 862760 + G 72 -7.5 -4.14627 | gap 1, opp_overlap 862735 862734 ATCTGAGCCGAGAAC GGGGCCCGTGCG CGC CG-ACGGATCCC TTGTTTGTCTCCCAA CYA_0853 862122 - 863051 + | phage integrase family site specific recombinase CYA_0854 863200 - 863105 - | hypothetical protein CYA_0855 864228 - 863215 - | hypothetical protein CYA_0856 864821 - 864219 - | DnaJ domain-containing protein TERM 619 864565 - 864579 + g 76 -5.6 -4.56597 | overlap 864552 864549 864567 AAGCTGGCTGATTTT CTCAGC TCG GCTGCG TTTTTAACGCCAAAG TERM 620 864885 - 864867 - R 84 -9.6 -4.41241 | opp_overlap 864867 864866, overlap 864868 CAAACCTGCACAAAA CTCACAGG CTG CCTGTGAA CTTATCTGCACGATG TERM 621 864884 - 864868 - R 70 -10.9 -3.24022 | opp_overlap 864867 864866, overlap 864867 AAACCTGCACAAAAC TCACAGG CTG CCTGTGA ACTTATCTGCACGAT TERM 622 865119 - 865139 + r 72 -6.1 -4.43911 | opp_overlap 865122, overlap 865123 GGATACTTGTCAACC CAAGGTCTG GGG CAGCCTTTG TTTTCCTTCAGCTTT TERM 623 865123 - 865135 + r 70 -3.3 -4.78077 | opp_overlap 865122, overlap 865119 ACTTGTCAACCCAAG GTCTG GGG CAGCC TTTGTTTTCCTTCAG CYA_0857 865431 - 865147 - | hypothetical protein CYA_0858 866230 - 865478 - | hypothetical protein TERM 624 866699 - 866729 + G 73 -3.2 -4.81551 | gap 1, overlap 866679 GGCCGCAATCCAGCG CCGCGCCG-CC GAGTGGGTGA GGCCGGGGCGG TTTTTGCTCTCCATC speB 866403 - 867308 + | agmatinase TERM 625 867624 - 867646 + F 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC TERM 626 868074 - 868047 - g 83 -6.3 -4.90266 | gap 1 CTGATCAACCAAAAA GCCTGGGAGCTG CACCT CA-CCCCCAAGC TCTGTCTGCAGGTGA CYA_0860 867735 - 868409 + | hypothetical protein TERM 627 868542 - 868530 - f 71 -4.8 -4.58395 | opp_overlap 868539, overlap 868532 TGGATCGGGCAAAAA CAGG GGAAT CCTG CCTAAAATTTCCCTC TERM 628 868539 - 868578 + F 83 -11 -4.02022 | gap 1, opp_overlap 868530 868532 868550, overlap 868543 868550 CAAAAACAGGGGAAT CCTGCCTAAAATTT-CCCT CGC AGGGCAAATTTTAGGTAAG TTTGTAATCATTGGC TERM 629 868543 - 868574 + F 73 -12.6 -2.7242 | gap 1, opp_overlap 868532 868550, overlap 868539 868550 AACAGGGGAATCCTG CCTAAAATTT-CCCT CGC AGGGCAAATTTTAGG TAAGTTTGTAATCAT CYA_0861 868983 - 869552 + | hypothetical protein proC 869558 - 870361 + | pyrroline-5-carboxylate reductase CYA_0862 871561 - 870347 - | pyridine nucleotide-disulfide oxidoreductase CYA_0864 872861 - 871611 - | major facilitator transporter TERM 630 872215 - 872198 - G 72 -4.1 -4.63486 | AGGTGGTGAAGAAAA TGTTGGC CGCG GCAAACA CCAATAGGGGGCGAT CYA_0865 872991 - 872893 - | hypothetical protein TERM 631 872970 - 872942 - G 82 -10.9 -4.08216 | overlap 872943 872946 TCAGCGGGCGGAAAA CTGAGGGGGAGCC AGC GGCTCACCCTCCA AAGATCCGGCGGAAA CYA_0866 873099 - 872992 - | hypothetical protein TERM 632 873204 - 873177 - R 91 -14.2 -3.85567 | gap 1, opp_overlap 873176 873175 AAGCGCAAAGGCAAA GGGGCCAGCCAGC AGG GCTG-CTAGCCCC GATTATAGACAAAAT CYA_0867 873600 - 873307 - | hypothetical protein CYA_0868 873814 - 874056 + | hypothetical protein TERM 633 874707 - 874745 + G 74 -2.3 -4.92385 | gap 2, overlap 874709 874724 GCGACCGCTACTTCT TCTTGCCC-CATCG-GGGC GAG GCCCGCGGCGTGGGCGGCA TTTTCTTTGACTATC hemF 874178 - 875191 + | coproporphyrinogen III oxidase CYA_0870 875223 - 875918 + | phospholipase/carboxylesterase family protein TERM 634 876186 - 876203 + G 100 -5.5 -5.68039 | ATTTATCCAGGTCGA TCGGGTT CAGG ATCCCGA TTTTTTTCTAGCTTT TERM 635 876424 - 876412 - g 74 -9.1 -3.8647 | ACGGAGGAGATCAAA CGTCG CTA CGACG GGGGACGCATCCTGG TERM 636 876681 - 876669 - g 79 -9.1 -4.14511 | AACGGCACCGGAAAA GGTGG AAC CCACC TCTGCCGACGAAGCC CYA_0872 875992 - 877470 + | hypothetical protein CYA_0871 878363 - 877467 - | CRISPR-associated protein APE2256 family TERM 637 877625 - 877641 + g 76 -5.7 -4.56597 | overlap 877618 877626 CTTCGGTTCTGCGGT TGGCGGC TTT GACGCCG TTTTTGGGGGCAGCG CYA_0873 879133 - 878417 - | hypothetical protein TERM 638 878656 - 878666 + g 72 -2.4 -4.68103 | CATTTTCAACTTGGG GCTG AGC CTGC TTTTGTTCAGGTTGC CYA_0874 880196 - 879144 - | putative CRISPR-associated RAMP family protein CYA_0875 880651 - 880193 - | hypothetical protein CYA_0876 881622 - 880648 - | CRISPR-associated RAMP family protein CYA_0877 882519 - 881677 - | CRISPR-associated Csm3 family protein TERM 639 882364 - 882332 - G 83 -4.8 -5.00884 | gap 2, overlap 882333 882334 ATGCCGCGCAAAAAA CTCTCCAGGCGGGAGC GCA GCGCCC-CCTTGAG-G CTGGAACCAGGGATG CYA_0878 882664 - 882527 - | hypothetical protein CYA_0879 883114 - 882668 - | hypothetical protein csx10 884334 - 883111 - | CRISPR-associated RAMP Csx10 family protein TERM 640 883314 - 883302 - G 74 -4.7 -4.61231 | CTACATCTTTAAAAA GCCCC CAG GCGGC GTTCCAGCCGGAAAC TERM 641 883536 - 883546 + g 76 -6.8 -4.41047 | overlap 883532 GCCATTGTTGCCAGC GCTG CCG CAGC TTTTGGTTAAAGGCT CYA_0881 885047 - 884334 - | CRISPR-associated RAMP family protein TERM 642 885061 - 885091 + r 79 -7.4 -4.56597 | opp_overlap 885067 ATCACTTCACCTCCA CAGGAACGGGCCGA CCC TCGGCCTGGGGCTG TTTTTGGACAAAAGC TERM 643 885085 - 885067 - R 70 -10.2 -3.26471 | opp_overlap 885061 TCACCTCCACAGGAA CGGGCCGA CCC TCGGCCTG GGGCTGTTTTTGGAC crm2-1 887242 - 885047 - | CRISPR-associated RAMP Crm2 family protein TERM 644 886345 - 886363 + g 71 -11 -3.53012 | CCTCCGATAGCCAGG GCTGACCT GGC AGGTCGGC TTTGGCCAGGGCCGG TERM 645 886967 - 886952 - G 81 -3.9 -5.03314 | GGGATCCCCAAAAAA GGCGG GCAGAT CCACC AGGTTAATGCGATCC TERM 646 888770 - 888754 - g 81 -4.4 -5.00616 | gap 1, overlap 888755 888756 CCCGCGCCGAAAAAA CTGCCCA ACTG TGGGC-G ACGATCCTGGCCCGC cas6 887772 - 888923 + | CRISPR-associated Cas family protein TERM 647 889940 - 889927 - T 70 -5.3 -4.43189 | ATCAACCGGACAAAA TTGTC AAAG GACAA GCCAAGACTCTGAAG TERM 648 892340 - 892322 - T 81 -10.3 -4.07568 | CCCTTGCGGGGAAAA GGTAGGG ATCAA CCCTACC CCCGGAAAAGCCTGA cas2-3 892887 - 892609 - | CRISPR-associated Cas2 family protein TERM 649 893252 - 893229 - H 76 -6.6 -4.56597 | overlap 893247 GTTGGCGTGGAAAAA GCCGAGATAG GGAT CCAACCCGGC CATCACCACTGCCGA TERM 650 894631 - 894597 - g 73 -11.5 -3.65351 | opp_overlap 894595 894598, overlap 894598 GCAGGGCTACCGAAA GCCCG-CCCTGTACTGC GAA GCAGT-CAGGGTCGGGT AGTTTACAGTTGGTG TERM 651 894630 - 894598 - g 75 -15 -2.78996 | opp_overlap 894595 894598, overlap 894597 CAGGGCTACCGAAAG CCCG-CCCTGTACTGC GAA GCAGT-CAGGGTCGGG TAGTTTACAGTTGGT TERM 652 894598 - 894630 + G 77 -15 -2.94679 | opp_overlap 894598 894597, overlap 894595 CAGGGCTACCGAAAG CCCG-CCCTGTACTGC GAA GCAGT-CAGGGTCGGG TAGTTTACAGTTGGT CYA_0887 893440 - 894633 + | ISSoc1, transposase CYA_0889 895712 - 894897 - | hypothetical protein TERM 653 895961 - 895944 - H 71 -4.7 -4.56597 | overlap 895945 GTGGGTCTTCAAAAA GGGCCGG CTGG CCAGCCG CGTCTCCAGATGGGG TERM 654 896487 - 896475 - g 74 -9.1 -3.86015 | CATTGGCCGCAGAAA CCCCA TCT TGGGG GGCTACCGTTTCAGG csx3 896418 - 897338 + | CRISPR-associated Csx3 family protein ntrD-2 898417 - 897554 - | nitrate ABC transporter, ATP-binding protein NtrD ntrC-2 900489 - 898480 - | nitrate ABC transporter, ATP-binding protein NtrC TERM 655 900650 - 900662 + r 77 -3.4 -5.07652 | ATCTGCAAACGAGGC TAGC GATTG GCTA TTTTGTTTTGCAGGG ntrB-2 901476 - 900649 - | nitrate ABC transporter, permease protein CYA_0894 903320 - 902016 - | nitrate/nitrite/cyanate ABC transporter periplasmic substrate-binding protein TERM 656 902621 - 902607 - G 76 -10 -3.86015 | GAGGGCCGCCATAAA GCCGAT CCC ATCGGC CACAATCCGGTAGGG TERM 657 903620 - 903632 + G 77 -2.6 -5.02074 | CTATCACTGGGATGG CTGC ACAGA GCGG TTTTTTGAGGGCTGG TERM 658 904296 - 904312 + G 100 -9.3 -5.0538 | CTGATCAGCCTGCAC GGCGGGG GAT CCCAGCC TTTTTTGGAGTGGCG CYA_0896 903531 - 904487 + | putative tocopherol cyclase chlB 905985 - 904453 - | light-independent protochlorophyllide reductase subunit B CYA_0897 906359 - 906496 + | hypothetical protein CYA_0898 906579 - 906881 + | mo-dependent nitrogenase family protein CYA_0899 907773 - 907420 - | hypothetical protein CYA_0900 908056 - 907763 - | nucleotidyltransferase domain-containing protein CYA_0901 913500 - 908362 - | hypothetical protein TERM 659 908756 - 908714 - G 70 -10.4 -3.53811 | TTGAGTTGGGCCAAA GCTGTTCCCCCCAACAGGGC GAC GATCTCTTGGGGGGAGCGGC TGGGGCTGCTGGAAA TERM 660 909221 - 909243 + g 74 -5.4 -4.56597 | overlap 909223 GCCTGAGTCGAGTCT GCGGGAGCTG CCG CCGCTTCCCC TTTTTCAGGGCGGGG TERM 661 911549 - 911539 - G 77 -2.4 -5.00616 | CTGCGGGTTAAAAAA GGCC AGC GGCA GATCCTGGGGAGCCA TERM 662 913330 - 913317 - G 86 -8.1 -4.58663 | overlap 913320 ACGAGGGGCCAAAAA GCAGG GATC CCTGC CCCCAGCCGCAATCC CYA_0902 913576 - 913902 + | anti-anti-sigma factor family protein cobI 913923 - 914639 + | precorrin-2 methyltransferase CYA_0904 915448 - 915594 + | hypothetical protein TERM 663 915825 - 915852 + G 70 -7.7 -3.97307 | gap 1 AGTTTTGTCGGTTCA GTGGCGGT-GCC GGTGG GGTTGCCGCCAC TTCTTGTTGGCTGCG TERM 664 916233 - 916258 + G 91 -11.7 -4.25104 | GGTGTTGCCCCCTTG GCGGCGGCGCG GGAT CGCGCGGCAGC TTTTGCTCAGCGCCG TERM 665 916404 - 916423 + G 89 -10.7 -4.3467 | TCAACTTTGGCATTG GCTGGGG ATCCCA CCCCAGC TTTTGCTCTGCAAGT CYA_0905 915781 - 916449 + | acetyltransferase CYA_0907 916527 - 917060 + | anti-oxidant AhpCTSA family protein CYA_0906 917242 - 917057 - | hypothetical protein TERM 666 917622 - 917638 + Gr 78 -3 -5.00884 | gap 1 CTCTTGACCCCTGCA GAGTGTG TGAT CAC-CTC TTTTTTGCCCCAGGT TERM 667 917987 - 917959 - gR 70 -9.6 -3.53091 | gap 1 AGTTGGCGCTGCAAA TTC-GCCGCCAGC TCTG GCTGGCCGCAGAA GACTAAACCATGGGC CYA_0909 917241 - 917993 + | glycerophosphoryl diester phosphodiesterase family protein pcm 918616 - 917990 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 668 918038 - 918048 + g 79 -8.2 -4.37886 | CCCCTTTTGCACCAC CCCC TCC GGGG TTTTGTGGAGGATCA CYA_0910 920313 - 918955 - | hypothetical protein TERM 669 919701 - 919714 + g 72 -2.3 -4.78572 | opp_overlap 919699 919701, overlap 919699 AGCGGTATTGAAACA GCTCC GTGA GCAGC TTTTCTTCGTTGGCC CYA_0911 921313 - 920306 - | hypothetical protein TERM 670 921197 - 921166 - G 74 -5.7 -4.49556 | overlap 921168 CCTCGATTAAATAAA CGGCCTGGTCAGG CGGGAT CCCTTCCAAGCCG GTGTAGCCCAGTTGT TERM 671 921358 - 921348 - R 71 -4.6 -4.62069 | TGGGGAGCCGAAAAA CCGG ATG CCAG GCGCTCAAGTCTGGG nth 922058 - 921363 - | endonuclease III CYA_0913 923165 - 922065 - | putative membrane-associated zinc metalloprotease TERM 672 922225 - 922212 - G 74 -2.3 -4.87626 | TTCCAAGATCAAAAA GGCGA TGTG TCCCC CATCCAAGGCGGGCA CYA_0914 923520 - 923278 - | NifU domain-containing protein CYA_0915 923754 - 924848 + | PIN/TRAM domain-containing protein TERM 673 924936 - 924963 + G 81 -4.1 -5.06414 | gap 1, overlap 924936 924937 ATCTGATTTTCTACA C-CCAGGATCGC CAGCA GCGTTTCTGGAG TTTTTATTGGGAGGG CYA_0916 924902 - 926623 + | sensor histidine kinase TERM 674 927070 - 927042 - g 72 -4.4 -4.58395 | gap 1, overlap 927044 TTGATGGTGCAAAAA GAGCTGGCCGAGC GCCT GCA-GGCCGGCCC TGGCAGCAAAGCCTA ksgA 926631 - 927470 + | dimethyladenosine transferase TERM 675 928136 - 928157 + G 72 -2.2 -4.8048 | opp_overlap 928130, overlap 928138 GTGGGTAAAGCCCGA GTCGATCG GGCAGG TGATCGCC TTTTTGGTCTCGGAA fabG 927519 - 928223 + | 3-ketoacyl-(acyl-carrier-protein) reductase sppA-1 928298 - 929104 + | signal peptide peptidase SppA, 36K type CYA_0920 930337 - 929252 - | hypothetical protein TERM 676 930887 - 930867 - R 75 -11.1 -3.46848 | opp_overlap 930864, overlap 930857 GAAAAGTCAGCAGAA CCTTGGGGC CTT GCCTCAAGG AACTGTCTAGCTAGA CYA_0921 931129 - 931016 - | hypothetical protein CYA_0922 931571 - 931131 - | hypothetical protein CYA_0923 932014 - 933912 + | monovalent cation:proton antiporter-2 (CPA2) family protein TERM 677 933937 - 933925 - T 83 -9.1 -4.6645 | TAGATAGAGACAAAA CCCCT CTC AGGGG AGCTAACCAGGATAG CYA_0924 935304 - 933940 - | FG-GAP repeat- ASPIC/UnbV domain-containing protein TERM 678 934760 - 934728 - G 74 -4.8 -4.62069 | gap 1, overlap 934746 934747 934749 CGTTGACGGCAAAAA TGTCCAT-CCGCTGG GAAA CCAGGGGCACGGCCA CCAGCCCCCGCCCTC TERM 679 935185 - 935175 - G 76 -8.2 -4.13767 | CGTTCCACTTCAAAA CCCG ATT CGGG CCGCGGAAGCCGCAC TERM 680 935646 - 935623 - g 75 -3 -4.82901 | gap 1, opp_overlap 935631, overlap 935627 GGTTCTCCACAAAAA CACAGCCGCCC GTC GGAAGGC-GCG TTTGTCTCGGATCGT rpsT 935393 - 935695 + | 30S ribosomal protein S20 TERM 681 935763 - 935773 + F 74 -3.2 -4.87803 | CAAGCTTGAGCATTT GCTT ACC GAGC TTTTGTTTGACACTC CYA_0926 936772 - 937035 + | nuclease CYA_0927 937728 - 937057 - | LuxR family DNA-binding response regulator CYA_0928 938700 - 937912 - | hypothetical protein TERM 682 938276 - 938256 - G 73 -3.2 -4.6971 | gap 1, opp_overlap 938256, overlap 938246 938258 CAAACGCCAACAAAA TGGC-CAGG GATC CCAGCGCCA CTTGTTGCCAAGACG cobA 939455 - 938697 - | uroporphyrin-III C-methyltransferase CYA_0930 940422 - 939523 - | CbiX family protein TERM 683 939708 - 939694 - GH 93 -3.4 -5.56264 | overlap 939696 CGGAAAGAGAAAAAA CGGCAG CAC CCGCAG GCGATACTGGCCGAG TERM 684 940274 - 940258 - GH 81 -4.3 -5.04601 | overlap 940260 940261 GTGACAAACCAAAAA CACCAGC GGG GCTGAGG ACATGGCAGCAGTCA CYA_0931 940421 - 941374 + | L-asparaginase, thermolabile CYA_0932 941582 - 942214 + | hypothetical protein TERM 685 943978 - 943950 - g 72 -3.8 -4.56133 | gap 1, opp_overlap 943966, overlap 943944 943951 943953 CCTGAAGAACTAAAA GCAGCTC-CGCTA ATTC TAGCGGGAGCAGT AACCCGCGACTTTGA CYA_0933 943317 - 944390 + | hypothetical protein CYA_0934 945376 - 944702 - | hypothetical protein TERM 686 944969 - 944980 + g 72 -7.2 -4.17516 | GTCGGCTGCCACCTG GGCC TTCT GGCC TTTCTCTGCTTTGCG CYA_0935 946043 - 945552 - | nucleotide-binding protein CYA_0936 946162 - 947004 + | short chain dehydrogenase/reductase family oxidoreductase CYA_0938 947117 - 947479 + | FHA domain-containing protein CYA_0937 948816 - 947476 - | polysaccharide biosynthesis domain-containing protein TERM 687 947865 - 947894 + gF 78 -6.3 -4.614 | gap 1, opp_overlap 947834, overlap 947883 947890 CCCAAGGGGAAAGGT GCCAGGCGTAGCGG CAG CC-CTGCGGCAGGC TTTTCTGTCCTTGGC TERM 688 950294 - 950282 - gH 72 -10.5 -3.38046 | overlap 950280 CGCCGAGTGGAAACA GCGCC ACT GGCGC GAGCCCTGGTACGTG TERM 689 950720 - 950687 - gH 73 -8 -4.07568 | gap 1, opp_overlap 950708, overlap 950689 GGTCTTTCTGGAAAA CAGTGGCGGCGGGGG TGGAT CCCGGGCCGCC-CCG ATCTTCCGCGAGGTG TERM 690 950719 - 950689 - gH 72 -9.5 -3.63744 | opp_overlap 950708, overlap 950687 TCTTTCTGGAAAACA GTGGCGGCGGGGG TGGAT CCCGGGCCGCCCC GATCTTCCGCGAGGT CYA_0939 948786 - 950765 + | penicillin-binding protein hup-2 951098 - 951415 + | DNA-binding protein HU TERM 691 951512 - 951555 + G 84 -8.2 -4.4874 | overlap 951514 TCAGCATGGTGGCAA TCGCGCTTGG-GGGGCAGCC ATTGCC GGCTGCCCTGCCGAG-GCTA TTTTGGATTTTTCGG TERM 692 951514 - 951553 + G 79 -10.8 -3.83717 | overlap 951512 AGCATGGTGGCAATC GCGCTTGG-GGGGCAGCC ATTGCC GGCTGCCCTGCCGAG-GC TATTTTGGATTTTTC TERM 693 952500 - 952487 - g 75 -3.8 -4.70169 | overlap 952489 GCAGATTCAAGAAAA GCTG TTGCGG CAGC ACCGCATCCTGGTGC cobD-2 951486 - 952631 + | threonine-phosphate decarboxylase CYA_0942 952658 - 953323 + | hypothetical protein TERM 694 953754 - 953741 - g 71 -5.9 -4.2704 | opp_overlap 953752 TGGAGGAGGAAGAAA CGCCA CGGC CGGCG GGGGTGCTCTCCCCT CYA_0943 953467 - 954468 + | hypothetical protein CYA_0944 955745 - 954669 - | putative secreted protein TERM 695 954958 - 954948 - G 78 -6.8 -4.58395 | GGGATCCTCCAAAAA GCTG TAC CAGC CCTTGATAGAAGCAT nadC 955764 - 956606 + | nicotinate-nucleotide pyrophosphorylase nadA 956763 - 957695 + | quinolinate synthetase TERM 696 959086 - 959108 + G 76 -11.2 -3.72576 | AGTTTGCTGTTGCTG GCTCGCTGGG TAG CCCAGGGGGC TTTGCTGCGGGAGGA nadB 957733 - 959253 + | L-aspartate oxidase gnd 960659 - 959250 - | 6-phosphogluconate dehydrogenase, decarboxylating TERM 697 960715 - 960725 + r 79 -6.8 -4.70613 | overlap 960711 CCGGCCAAGAGGGTT CAGG GAT CCTG TTTTCTTCACCTTTT CYA_0949 961249 - 960752 - | pentapeptide repeat-containing protein CYA_0950 961326 - 962519 + | hypothetical protein TERM 698 963204 - 963190 - g 72 -2.1 -4.72272 | GCTCTGCAGCAAAAA GAAGA GAGCA CCTTC TGGCAATTTTTGATC CYA_0951 962731 - 964725 + | peroxisomal fatty acyl CoA ABC transporter transmembrane ATP-binding protein sir 964842 - 966620 + | sulfite reductase subunit beta CYA_0953 966736 - 967527 + | TPR repeat-containing protein TERM 699 967532 - 967518 - T 70 -5.6 -4.42806 | overlap 967519 GTATGCCCAAAGAAA CCAGCC TTA GGCTGT AGAGAGTCAGGGGAC CYA_0954 967939 - 967595 - | anti-anti-sigma factor family protein TERM 700 968367 - 968379 + G 70 -10.5 -3.63895 | GCTGCAAATGGCCGC GCGGG ATC CCCGC TTTCGCCTCGTTACC TERM 701 968609 - 968624 + G 70 -10.4 -3.63922 | overlap 968608 AGCACTGGGGGGAAG GCTGGC TGCA GCCAGC TCTTTTGACAACCCT CYA_0955 968098 - 969234 + | glycosyl transferase, group 2 CYA_0956 970194 - 969244 - | D12 class N6 adenine-specific DNA methyltransferase CYA_0957 970444 - 970268 - | hypothetical protein CYA_0958 970877 - 970713 - | hypothetical protein TERM 702 970777 - 970787 + g 75 -3.2 -4.87665 | overlap 970748 TGCAAGTAGGTGGCT GTGG TTT CTAC TTTTTGTCGGTGCCA TERM 703 972140 - 972151 + G 76 -5.8 -4.65895 | CCTTTCGCTTCCCGC CCTC GATT GAGG TTTTTCACTGGCACG CYA_0959 971755 - 972450 + | glutamine amidotransferase, class I murD 972527 - 973936 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase CYA_0961 973845 - 975005 + | putative cell division protein FtsW CYA_0962 975553 - 975020 - | hypothetical protein TERM 704 977276 - 977291 + Gr 74 -10.4 -3.59979 | CTCAGGCCGCTTCTC CACCGG TTCG CCGGTG TTTACCCTGCAGGCC CYA_0964 978337 - 977468 - | alpha/beta fold family hydrolase CYA_0965 976929 - 977528 + | hypothetical protein TERM 705 978383 - 978395 + Tr 86 -6.2 -5.0538 | overlap 978377 978377 GAAATCGCAGGGTCA GGCG CTGGC CGCC TTTTTTGGCGTCGGC CYA_0966 979045 - 978380 - | Crp/FNR family transcriptional regulator TERM 706 978627 - 978617 - G 78 -4.6 -4.70626 | TAACAAGGTCAAAAA GCCC TTC AGGC GGTCGATGGCGCGAC TERM 707 978878 - 978856 - G 80 -4.6 -4.89393 | opp_overlap 978861 TAAACCCGACAAAAA CCTCCCGCCG CTC CGGCGTTTGG CTGACCAGGCGCACC TERM 708 978861 - 978873 + g 70 -10.5 -3.64703 | opp_overlap 978856 CCGACAAAAACCTCC CGCCG CTC CGGCG TTTGGCTGACCAGGC surE-2 979418 - 980197 + | acid phosphatase SurE TERM 709 980219 - 980207 - T 74 -3.3 -4.98531 | TTTTGAAAGCAAAAA TGGCC TAG GGCAA GCAGGCTTGGCCGGG CYA_0968 980715 - 980254 - | hypothetical protein hisH 981372 - 980722 - | imidazole glycerol phosphate synthase subunit HisH TERM 710 980871 - 980894 + g 86 -16.8 -3.13164 | AGGTTTGGCTGCCGT GCTGGGTGGT GGCG ACCACCCAGC TTGGATCCTTGGGCA TERM 711 981283 - 981251 - G 73 -6.3 -4.28762 | gap 1 ACAAGGCCATCAAAA GCCGCTAGCC-CAG CCGGCT CTGTGACTAGCTGC ACCTCGGCCCCGGCC grpE 983253 - 982540 - | co-chaperone GrpE CYA_0972 985091 - 983430 - | putative 2`,3`-cyclic-nucleotide 2`-phosphodiesterase TERM 712 984102 - 984088 - G 82 -11.4 -4.07568 | GGGTTGGCCCCAAAA CGGGCT GCC AGCCCG CCGCGATAGGCACAA CYA_0973 986375 - 985155 - | hypothetical protein TERM 713 985773 - 985734 - G 70 -9.9 -3.59979 | overlap 985737 GTTTTTGAGGCCAAA CAAGTTGGCCACCAGCC AGTAGG AGCCGGTGGCCCGCTCG CGAAATTCTTCATCC CYA_0974 987371 - 986439 - | hypothetical protein CYA_0975 989007 - 987514 - | putative S-layer protein tas 990264 - 989224 - | aldo/keto reductase Tas CYA_0977 992028 - 990346 - | hypothetical protein TERM 714 993025 - 993049 + G 75 -12.1 -3.54408 | TTGAGTGGTGCTTTT TGCCCTCCCAG GAG CTGGGGGGGGA TTCGTTTAACTACCA CYA_0978 992523 - 993647 + | response regulator CYA_0979 993928 - 993659 - | BolA/YrbA family protein TERM 715 994267 - 994245 - R 74 -10.6 -3.54543 | opp_overlap 994259 994260, overlap 994257 994260 ACCGATGGGGGCAAA GAGCCGAGTA AAC TACCCGACTC CGACCGCTAAAGCGG TERM 716 994259 - 994294 + r 79 -11.9 -3.65351 | opp_overlap 994245 994257 994260, overlap 994260 994287 AGAGCCGAGTAAACT ACCCGACTCCG-ACCGC TAAA GCGGTACGGAG-CGGGC TTTCAGTAGCCCTGA TERM 717 994293 - 994260 - R 82 -15.4 -2.97171 | opp_overlap 994259 994260 994287, overlap 994245 994257 GAGCCGAGTAAACTA CCCGACTCCG-ACCGC TAAA GCGGTACGGAG-CGGG CTTTCAGTAGCCCTG TERM 718 994260 - 994293 + r 81 -15.4 -2.78996 | opp_overlap 994245 994260 994257, overlap 994259 994287 GAGCCGAGTAAACTA CCCGACTCCG-ACCGC TAAA GCGGTACGGAG-CGGG CTTTCAGTAGCCCTG CYA_0981 995468 - 994257 - | ISSoc1, transposase CYA_0982 996033 - 995539 - | hypothetical protein TERM 719 996274 - 996296 + r 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC CYA_0983 997660 - 996509 - | carboxylesterase TERM 720 996849 - 996837 - G 81 -4.1 -5.0133 | GATCCCGTCAAAAAA CTCTC TCC GAAAG CGGCTACTTCCTCTG TERM 721 996895 - 996914 + g 83 -9.2 -4.30576 | overlap 996897 CGGCATGGCCGGCGA TCCCGCCC AGGC GGGCGGCA TTTTCGTCGTGAACC TERM 722 997039 - 997025 - G 71 -5.7 -4.37092 | ATCCCCTGGATAAAA CTGAG TTTGG CTCAG GCCCAGAGGCTGCAA CYA_0984 997798 - 998757 + | LysR family transcriptional regulator TERM 723 998804 - 998791 - f 72 -2.4 -4.86731 | opp_overlap 998791 TCTGGTCAAATAAAA TACC CATATC GGTA GTTTCAAGTGTTCCG TERM 724 998994 - 999007 + G 91 -5.2 -5.26875 | overlap 998991 998990 GGGGAAGCCACTCCC GCCC AGATCG GGGC TTTTTTAATTGCCCA TERM 725 999199 - 999213 + G 73 -7 -4.28548 | overlap 999179 999200 CTTTGCTGCTGGCGG CGGCAG GGT CAGCCG TTTTGCTGCATGGCT CYA_0985 998871 - 999911 + | hypothetical protein TERM 726 1000013 - 999991 - T 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG TERM 727 1000261 - 1000238 - T 95 -13.1 -4.49958 | AGCCCAGGAAAGAAA GCCCCCCGG CCAGCT CCAGGGGGC AAGAAGGGAAAGGTT CYA_0986 1001570 - 1000284 - | Rho termination factor domain-containing protein TERM 728 1000713 - 1000695 - G 73 -6.6 -4.32177 | opp_overlap 1000712, overlap 1000698 CGACGGGATAATAAA CGAGCTGA TGG CCTGCTCG GGCACCAGTTGACGG CYA_0987 1001730 - 1001623 - | hypothetical protein CYA_0988 1002013 - 1001774 - | hypothetical protein CYA_0989 1001745 - 1002821 + | hypothetical protein TERM 729 1002897 - 1002911 + FH 88 -4.2 -5.42259 | AACGTGCTCCGCACC GCCG ACGCAAA CGGC TTTTTTTGGGGATCC CYA_0990 1002934 - 1004052 + | heptosyltransferase family protein CYA_0991 1004332 - 1005240 + | hypothetical protein CYA_0992 1006382 - 1005261 - | alcohol dehydrogenase, iron-containing pilM 1006632 - 1007750 + | type 4 fimbrial biogenesis protein PilM pilN 1007814 - 1008518 + | type 4 fimbrial biogenesis protein PilN TERM 730 1008743 - 1008729 - g 77 -2.7 -5.05782 | AGGTAGCCCAAAAAA CCAGC CAGTT GCAGG AGGTACAGGGCCAGA CYA_0995 1008518 - 1009240 + | hypothetical protein TERM 731 1009449 - 1009435 - f 72 -10 -3.57792 | opp_overlap 1009435 GCAGGTAGTGGCAAA GCCGAA AAT TTCGGC TTTGATTAGGGAAGC TERM 732 1009435 - 1009449 + F 77 -10 -3.90112 | opp_overlap 1009435 GCAGGTAGTGGCAAA GCCGAA AAT TTCGGC TTTGATTAGGGAAGC CYA_0996 1009528 - 1011699 + | putative type IV pilus secretin PilQ CYA_0997 1011746 - 1012510 + | hypothetical protein CYA_0998 1013081 - 1012515 - | ISSoc4, transposase orfB CYA_0999 1013461 - 1013063 - | ISSoc4, transposase orfA TERM 733 1013521 - 1013511 - H 76 -6.8 -4.55798 | opp_overlap 1013510 TATTTTAAATTAAAA GGCT GTA AGCC CTTGCTAGAAGCCAG TERM 734 1013731 - 1013718 - g 74 -5.9 -4.41895 | AATGGGGAAGGAAAA GAGGC CGAC GCCCC CGGTTCCTTGTTGGA CYA_1000 1013568 - 1013966 + | hypothetical protein TERM 735 1014165 - 1014184 + T 72 -6.4 -4.3586 | overlap 1014167 TTGAGGACGAGAGCT TAGCGTCA TTGC TGGCGCTG TTTTCGTGTCGCTCA TERM 736 1014248 - 1014236 - T 77 -3.3 -5.1101 | TTACCATTCAAAAAA TAGGG ATC CCCAA GTCTCCTTCCTCTAG CYA_1001 1014918 - 1014352 - | hypothetical protein TERM 737 1015329 - 1015351 + G 78 -4.7 -4.72272 | AGCTAGCCGCAGCGG CCTACGGCG CCGAT CGCAGTTGG TTTTTGGTGAACGGC CYA_1002 1015046 - 1016581 + | Orn/Lys/Arg decarboxylase CYA_1003 1018019 - 1016586 - | HlyC/CorC (HCC) family transporter TERM 738 1016787 - 1016775 - G 78 -4.7 -4.8048 | overlap 1016776 GTGGTAGATCAAAAA GCCCC CCA GGGTC TGGTAGTCCTCGTGG TERM 739 1017457 - 1017433 - G 74 -5.6 -4.40561 | overlap 1017430 1017434 GTGCTGTAAAAAGAA GTGGCCTCCG GGATG CGGACGCCAA AAAGCTGCAACAAGC TERM 740 1017475 - 1017461 - G 78 -7.1 -4.62069 | TGCGGACGCCAAAAA GCTGC AACAA GCAGC GGGAGGAGAACCGGA TERM 741 1018212 - 1018228 + r 71 -4.3 -4.56597 | opp_overlap 1018212 TCAAGCATTCATCAA GCAGTGG CAA CTACCGC TTTTTCCGGCAACGC CYA_1004 1018578 - 1018222 - | peptidase propeptide/YPEB domain-containing protein ilvE 1018844 - 1019764 + | branched-chain amino acid aminotransferase CYA_1006 1019842 - 1020354 + | putative purine phosphoribosyltransferase CYA_1007 1024249 - 1020398 - | FkbM family methyltransferase TERM 742 1021557 - 1021547 - G 75 -3.2 -4.82901 | TTCGGTGCACAAAAA CTCC AGG AGAG CGTAGGCATCTTCAA TERM 743 1024393 - 1024418 + r 72 -10.5 -3.48276 | gap 1 GTCTCGTCAGTCTCT GTTGC-GGGCCA AGC TGGCTCAGCAAC TTCTCTCCCAAGCCA TERM 744 1024947 - 1024962 + r 100 -10.4 -5.67283 | TTTATGTACTCCGTG GCTCCC TGTG GGGAGC TTTTTTATTTCAGTT CYA_1008 1025978 - 1025028 - | hypothetical protein TERM 745 1025467 - 1025487 + g 82 -3.1 -5.10461 | AACTCAGTACAGAGT CCTGGCTCC AAG GCAGCAGGG TTTTTCTTAAATAGA TERM 746 1025667 - 1025687 + g 71 -11.1 -3.51161 | ATGAAGAATCCAGTC CATGCCCTG ATC CAGGGCAAG TTGTATAGCAGTTTC CYA_1009 1026683 - 1025994 - | 2OG-Fe(II) oxygenase family oxidoreductase TERM 747 1026383 - 1026403 + g 77 -2.5 -5.08824 | opp_overlap 1026384 CAAGTTCAGCAAAGA TTGTGGGAG CCA CTGCTGCAA TTTTTTCCCTCAACA CYA_1010 1027531 - 1027337 - | hypothetical protein TERM 748 1029144 - 1029161 + G 93 -3.3 -5.60993 | overlap 1029143 TTTATGTGTGTGATA CGCCTCT ACGA GGAGACG TTTTTTTATGAGGCG CYA_1011 1027704 - 1029731 + | FkbM family methyltransferase TERM 749 1030785 - 1030795 + G 74 -5.4 -4.63218 | ACAGACTTACGTCAG CCAA CTA TTGG TTTTGTTAGCCGAGA TERM 750 1032378 - 1032400 + G 76 -7.7 -4.25283 | gap 1, opp_overlap 1032377 CAGCACATGAACTAT CGCTATCCGC TGAA GCGGG-AGCG TTTTCCTCAAGGACT TERM 751 1032425 - 1032441 + G 75 -4.3 -4.78572 | overlap 1032426 AGGACTGCGGCCTGC TGTGCAG AAG CTGCCCG TTTTGTTAATTGCCC CYA_1012 1029768 - 1032461 + | macrocin-O-methyltransferase domain-containing protein CYA_1013 1033253 - 1032528 - | hypothetical protein TERM 752 1033434 - 1033418 - R 79 -3.6 -5.02074 | opp_overlap 1033420, overlap 1033420 CCATGGGGGAAAAAA TACCGG AGCTG CCGGTT GTGAACACCTAGATA lpxD 1035054 - 1034023 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 753 1034999 - 1035027 + g 86 -8.1 -4.59109 | overlap 1035000 CCGTGAATTTCTAGG GTGGGATCTCCCT CGT AGGGGCATCCCAA TTTTTGGGCGATCTC TERM 754 1035000 - 1035026 + g 72 -11.6 -3.34984 | overlap 1034999 CGTGAATTTCTAGGG TGGGATCTCCCT CGT AGGGGCATCCCA ATTTTTGGGCGATCT CYA_1016 1035588 - 1035070 - | hypothetical protein CYA_1019 1036398 - 1037417 + | hypothetical protein CYA_1020 1037440 - 1038135 + | hypothetical protein TERM 755 1038193 - 1038183 - f 81 -3.2 -5.20534 | ATCAACCAACAAAAA GCTC TAG AAGC CCTCAAGGAGGTTGA TERM 756 1038588 - 1038607 + G 74 -4.9 -4.57073 | opp_overlap 1038590, overlap 1038590 CTCTCTACTCCCAAG CAGGCGA AGGAGA TCGCCAG TTTTTCCCACGAATC TERM 757 1039209 - 1039226 + G 74 -9.1 -3.93136 | opp_overlap 1039220 CCTCGCCTGCAGGCT GCCTACC ACAA GGTGGGC TTTATCCCTCCCTAT TERM 758 1039878 - 1039909 + G 70 -7.9 -4.09864 | opp_overlap 1039868 GAAATCAGGGTTCTG CTGGCCCTGGAGC AGCTCC GATCCAGGCCCGG TTTTACGGACTGGCT TERM 759 1040959 - 1040930 - g 88 -6.9 -5.1356 | CTGGATCAAGAAAAA CCCCGCCCCGCCG GAAG CGCCAGTGCGCGG GCTGCTGGTCATCGA TERM 760 1041220 - 1041239 + G 74 -5 -4.62984 | GCGGAGAAGATGTGG CTGTCTTA AAGG TGGGACAG TTTTATCTCTCCTCG CYA_1021 1038333 - 1041368 + | hypothetical protein TERM 761 1041891 - 1041901 + G 75 -3.2 -4.85599 | GGGGCAGTTGAGGGA GTTG GAA CAGC TTTTTCTCGACTACA CYA_1022 1041547 - 1042437 + | leucine-rich repeat-containing protein CYA_1023 1042530 - 1042799 + | hypothetical protein CYA_1024 1042833 - 1043561 + | ABC transporter, ATP-binding protein CYA_1025 1043739 - 1043951 + | CP12 domain-containing protein TERM 762 1043968 - 1044001 + T 78 -4.6 -4.96848 | gap 2, opp_overlap 1043967 1043966, overlap 1043977 TTCTGGGTTAAAACG CAGCAGCCTGCCAGCT CCCT AGG-GGCGGGCT-CTG TTTTTCTCTCACGGA TERM 763 1043977 - 1043997 + T 74 -10.3 -3.64281 | opp_overlap 1043967 1043966, overlap 1043968 AAAACGCAGCAGCCT GCCAGCTCC CTA GGGGCGGGC TCTGTTTTTCTCTCA CYA_1026 1044813 - 1044010 - | iron permease TERM 764 1044271 - 1044260 - G 93 -7.2 -5.03747 | AAACCCCGGAAAAAA GCCC CCAA GGGC AGCTTCAGCCCCACC TERM 765 1044466 - 1044450 - G 81 -2.1 -5.10497 | opp_overlap 1044462, overlap 1044451 AAGCTAGGGAAAAAA CCTGGCC TGT GGCGAGC GCTGCCTGGGCTTGT msrB 1045273 - 1044863 - | methionine-R-sulfoxide reductase TERM 766 1045068 - 1045056 - G 74 -4.8 -4.56775 | opp_overlap 1045066 ATCGGCTCCCAAAAA CTGG GCCAA CCAG TGCCACTGTCGTATT CYA_1028 1045718 - 1046161 + | hypothetical protein CYA_1029 1046250 - 1047260 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein CYA_1030 1047276 - 1049177 + | R3H domain-containing protein ubiA 1050096 - 1049194 - | prenyltransferase TERM 767 1049425 - 1049441 + g 70 -7.9 -4.03234 | opp_overlap 1049424 1049425 GCCCAAGAAAAACAG CCCCACC GCC GTTGGGG TTTGTCTCCCAAAAA TERM 768 1049485 - 1049458 - G 78 -3.3 -5.00616 | gap 1, opp_overlap 1049459, overlap 1049459 TTGTCTCCCAAAAAA GCGGGCGCTGGA GTGGA TCCCG-GCCCGT TCGTCGTCCTCTCGA TERM 769 1049772 - 1049757 - G 74 -2.4 -4.82901 | CCGGGTTGAGAAAAA GCGCCA GCCC CGCCGC ACAGGCCAAGGTCAG CYA_1033 1050354 - 1051103 + | DNA-binding response regulator CYA_1032 1052437 - 1051100 - | polyA polymerase family protein hemH 1053632 - 1052607 - | ferrochelatase TERM 770 1054405 - 1054365 - R 79 -12.5 -3.53444 | CGATTTGTGTGGAAA CGCAACCGCCGGAGCTGCA AAC CGCAGCTAAGGCGATTGGG GTGGACTTGGGGAGG TERM 771 1054986 - 1055038 + r 86 -14 -3.6106 | gap 1, opp_overlap 1054983, overlap 1054989 GCTGCTGTAAACCGG CCACCCTACATCCCCCTGCCCCCCG TATA CGGGGGGCAGTCGGA-GCCGGGTAG TTTACAACTCTTGGC TERM 772 1054989 - 1055035 + r 80 -14.3 -2.92439 | gap 1, opp_overlap 1054983, overlap 1054986 GCTGTAAACCGGCCA CCCTACATCCCCCTGCCCCCCG TATA CGGGGGGCAGTCGGA-GCCGGG TAGTTTACAACTCTT CYA_1035 1055432 - 1055040 - | hypothetical protein CYA_1037 1055745 - 1056233 + | hypothetical protein TERM 773 1057650 - 1057664 + G 73 -2.8 -4.67982 | opp_overlap 1057641 CAATGAGCCCCAGCA GCGA CCGGGCA TCGC TTTTCTTCACTGGCA CYA_1038 1056280 - 1058187 + | hypothetical protein TERM 774 1058501 - 1058513 + G 82 -6.2 -4.95484 | TTCAGAAATGTGGGA GCGG GTCAA CCGC TTTTATTTGATGGTC CYA_1039 1058181 - 1059176 + | hypothetical protein CYA_1040 1059442 - 1059936 + | hexapaptide repeat-containing transferase CYA_1041 1061749 - 1060292 - | hypothetical protein TERM 775 1061874 - 1061844 - R 82 -6.1 -4.85782 | gap 1, overlap 1061868 1061871 CCTGGTAAAAAGAAA GGACTCC-GTCGCG CTGA CGCGAAAGGACTCC GTCCCGCGAACAGTG CYA_1042 1063738 - 1061915 - | hypothetical protein TERM 776 1062873 - 1062857 - G 72 -2.1 -4.77438 | overlap 1062858 1062859 AGCCACCAGGAAAAA CCCCAGC GCC GCCGGCA CCGTCAGCTTGGCCA CYA_1043 1064101 - 1063841 - | hypothetical protein CYA_1044 1065829 - 1064207 - | S15 family X-Pro dipeptidyl-peptidase CYA_1045 1066232 - 1066041 - | hypothetical protein CYA_1046 1066355 - 1066525 + | hypothetical protein CYA_1047 1066528 - 1067049 + | acetyltransferase TERM 777 1067149 - 1067135 - g 70 -10 -3.56643 | TCCAGACCTGTCAAA CTCAGC GAG GCTGAG ATCCAGACCAAGCTG phhB 1067117 - 1067407 + | pterin-4-alpha-carbinolamine dehydratase TERM 778 1067471 - 1067438 - f 78 -13.1 -3.37354 | opp_overlap 1067439 1067441, overlap 1067441 CAGACTGAGCCATAA CCAGGGATCCCTGCG GCGC CGCGGGGATCCCTAT TTGTTTGCCACTGCT TERM 779 1067439 - 1067470 + F 100 -16.6 -4.42806 | opp_overlap 1067438 1067441, overlap 1067441 AGACTGAGCCATAAC CAGGGATCCCTGCG GCGC CGCGGGGATCCCTA TTTGTTTGCCACTGC TERM 780 1067441 - 1067468 + F 100 -19.2 -3.81958 | opp_overlap 1067438 1067441, overlap 1067439 ACTGAGCCATAACCA GGGATCCCTGCG GCGC CGCGGGGATCCC TATTTGTTTGCCACT TERM 781 1067468 - 1067441 - f 87 -17 -2.84919 | opp_overlap 1067441 1067439, overlap 1067438 ACTGAGCCATAACCA GGGATCCCTGCG GCGC CGCGGGGATCCC TATTTGTTTGCCACT TERM 782 1067984 - 1067998 + G 86 -7.1 -5.02287 | opp_overlap 1067972 CAATGCGGCACGGGC TGCCC AAGTG GGGCA TTTTATCTTTTTCTC TERM 783 1068407 - 1068419 + G 83 -4.7 -5.08824 | CTTGCGGGGAGCGCG CAGGG TGG CCCAG TTTTTTCAGTGGAGC CYA_1049 1067688 - 1068644 + | NAD-dependent epimerase/dehydratase family protein TERM 784 1068704 - 1068719 + F 86 -10.4 -4.30995 | GCGGCCCAGCATCCC CCAGGG TTCG CCCTGG TTCTTTTCTCAGCCC CYA_1050 1068748 - 1069734 + | ABC transporter, ATP-binding protein CYA_1051 1070897 - 1069764 - | glycosyl transferase, group 1 TERM 785 1069972 - 1069962 - G 76 -8.2 -4.1891 | overlap 1069963 CGGCTCGAAGAGAAA GCCG TTG CGGC CGCTGTCCACCACAT CYA_1052 1071130 - 1070999 - | hypothetical protein CYA_1053 1071986 - 1071255 - | hypothetical protein TERM 786 1071485 - 1071465 - G 95 -11.1 -4.59773 | overlap 1071478 TTGCACCCCCAAAAA CTGCAAGGC AAA GCCCCGCAG CCAAGGAGAAGCCCA TERM 787 1071645 - 1071606 - G 76 -6.2 -4.62783 | gap 1 CAGGGATCCCAAAAA CACCAGCCCCAGCCG-AGC TGT GCCGCGGCGGCGGGAGGTG AGGATGAACAGGGCC TERM 788 1071752 - 1071726 - G 78 -6.5 -4.57073 | overlap 1071728 CACCCGCCCCAAAAA TAGCTGGCCAC TGTGG ATGGCCAGCCC CGAGCCGTCGGGATA TERM 789 1071750 - 1071728 - G 79 -11.3 -3.90048 | overlap 1071726 CCCGCCCCAAAAATA GCTGGCCAC TGTGG ATGGCCAGC CCCGAGCCGTCGGGA CYA_1054 1072150 - 1071983 - | hypothetical protein CYA_1055 1072187 - 1072819 + | UbiE/COQ5 family methlytransferase thiG 1073605 - 1072832 - | thiazole synthase TERM 790 1073262 - 1073237 - G 77 -12.5 -3.66803 | GGGCAAGACCTTAAA CCCCCGCCGAA CCAG CTCGGCGGCGG CAGCGGGCAGTTGCA thiS 1073902 - 1073705 - | thiamine biosynthesis protein ThiS TERM 791 1073826 - 1073814 - G 81 -10.5 -4.13945 | ACCGCCACCGCAAAA GGGCC GCT GGCCC CCACCTGGGCTATCG thiO 1075026 - 1073890 - | glycine oxidase ThiO TERM 792 1074781 - 1074768 - G 77 -3.7 -4.86731 | CCTGCTGAAAGAAAA CCGGC TCTG GCAGG CTGGCCAGAAGGGCG TERM 793 1075198 - 1075167 - R 100 -15.2 -4.25104 | gap 1, opp_overlap 1075168 GGCTCCTCATTAAAA CCATCCCCTCTCCCC AGA GAGGAGAGGGG-CGG TTGGCTTCATCCACC TERM 794 1075168 - 1075198 + r 71 -11 -3.20723 | opp_overlap 1075167 GCTCCTCATTAAAAC CATCCCCTCTCCCC AGA GAGGAGAGGGGCGG TTGGCTTCATCCACC CYA_1059 1077295 - 1075232 - | 5'-nucleotidase family protein CYA_1060 1077709 - 1077377 - | putative methylated-DNA-[protein]-cysteine S-methyltransferase TERM 795 1077946 - 1077901 - g 91 -9.6 -4.4009 | gap 1, opp_overlap 1077930 1077932 GGCGAGGCTACAAAA CGGCGGACGAGTTTGGGCTGA TCGAT CCGGCCCAAGCG-GCCCGCCG CCAGATGCAGCGCCT TERM 796 1077930 - 1077986 + G 78 -6.7 -4.57073 | opp_overlap 1077901, overlap 1077932 GGGCTGATCGATCCG GCCCAAGCGGCCCGCCGCCAGAT-G-CAG CGC CTGGCCATCTGGCTG-GTGCC-CTTTGGC TTTTTGGCCGGGGTG TERM 797 1078069 - 1078106 + G 81 -2.5 -5.24129 | gap 1 GCAACCACCTCATCG GCGGCCTGCTGGGTGCGC TGA GCGGGGCCA-TGGGCAGC TTTTTTGTCGGGGGC CYA_1061 1077738 - 1078295 + | hypothetical protein TERM 798 1078461 - 1078478 + G 78 -10.5 -4.07568 | GGCGGGGATCGCCTG GCTGGCC TCTG GGCCGGC TTTTGCCCACCACGC TERM 799 1078484 - 1078529 + G 71 -11.1 -3.49687 | overlap 1078484 CTGGGCCGGCTTTTG CCCACCACGCCTTG-GGCGGG AGATTG CCCGCCACGGGGTG-GGAGGG GTTTTTGTCGGGCCT TERM 800 1078484 - 1078530 + G 88 -7.8 -4.83615 | gap 1, overlap 1078484 CTGGGCCGGCTTTTG CCCACCACGCCTTG-GGCGGG AGATTG CCCGCCACGGGGTGGGAGGGG TTTTTGTCGGGCCTG CYA_1062 1078417 - 1079034 + | HupE/UreJ family protein ndk 1079109 - 1079558 + | nucleoside diphosphate kinase TERM 801 1079826 - 1079803 - T 71 -7.4 -4.09243 | gap 1, overlap 1079792 1079788 CACAGCTCTGGAAAA GGC-AGAGCCA AGC CGGCCCTAGCC AGAACGGGAATCGAG CYA_1064 1081194 - 1079821 - | taurine ABC transporter ATP-binding protein TERM 802 1080016 - 1080034 + g 100 -3.7 -5.7946 | opp_overlap 1080013 1080014, overlap 1080019 ATCCAAGAAGAAGTC CGCCCGC ATGGA GCGGCTG TTTTTTTCTTCCAGA TERM 803 1080746 - 1080727 - G 72 -7.8 -4.1891 | gap 1, opp_overlap 1080728 1080730, overlap 1080728 GGGTTCCAAGACAAA GGCGCGGGC AAA GCCCAC-CC GCTGCTTCATCCCCC CYA_1065 1082940 - 1081213 - | taurine ABC transporter permease protein TERM 804 1082620 - 1082578 - G 71 -8.3 -3.92745 | overlap 1082579 1082610 AAAAAGCGCGATAAA GCCGGTAACGGTGATGGAG AGAAA CCCCAACACCGGCACCGAT TGCAGGATGTCCAGC TERM 805 1082920 - 1082874 - G 76 -8.6 -4.21275 | gap 1, overlap 1082875 CCAACGTACCCAAAA TGATG-GCCCCATCGGCAGCC CCAGCC GGCAGCCGACGGAGCACCTCC GGAGAAGGAAAAGTC TERM 806 1082919 - 1082875 - G 70 -12.1 -3.12283 | gap 1, overlap 1082874 CAACGTACCCAAAAT GATG-GCCCCATCGGCAGCC CCAGCC GGCAGCCGACGGAGCACCTC CGGAGAAGGAAAAGT CYA_1066 1083311 - 1083027 - | hypothetical protein TERM 807 1083075 - 1083086 + g 84 -2.2 -5.28755 | overlap 1083074 ATTCCACCTGGGATC GTCA AGGA TGGC TTTTTTGGTCTGTTT TERM 808 1083102 - 1083119 + g 78 -9.9 -4.06502 | TTTTTTGGTCTGTTT GAGCTGT TTCC ACAGCTC TTTAATTTGGCGATA CYA_1067 1084351 - 1083395 - | hypothetical protein TERM 809 1083873 - 1083848 - G 73 -6.7 -4.27316 | GCCGCGAATGGAAAA CCAGTCCGGCA CCAC CGTCGGACGGG ATCCCTCTGGCAGAG CYA_1068 1086174 - 1084726 - | putative lignostilbene-alpha,beta-dioxygenase TERM 810 1086692 - 1086702 + G 73 -6.8 -4.32857 | opp_overlap 1086684 AAAACCACCACCTGT GCCA AGC TGGC TTTGTATTTGCGCAA TERM 811 1087361 - 1087344 - g 81 -7.7 -4.41616 | ATTTCCTCAAACAAA TGCGCCT GATC AAGCGCA TGGGATCCCTGGCGG TERM 812 1087451 - 1087433 - g 72 -2.3 -4.70626 | overlap 1087439 1087445 1087446 GAACAATTGCAAAAA GGACAAG ACCAA CTGGCCC GCGCCGAGGCCATGA ffh 1086341 - 1087792 + | signal recognition particle protein CYA_1071 1087802 - 1088257 + | RNA methyltransferase CYA_1070 1088388 - 1088233 - | hypothetical protein TERM 813 1088626 - 1088610 - g 71 -5.8 -4.36914 | gap 1, overlap 1088589 1088586 1088584 1088611 1088612 CCCGCTCTTACAAAA GC-GGGC CGAG GCCCAGC AGCGGGCCCAGCTCC CYA_1072 1088473 - 1090218 + | penicillin-binding protein CYA_1073 1091581 - 1090358 - | glycosyl transferase, group 2 CYA_1074 1094227 - 1091762 - | HDIG domain-containing protein CYA_1075 1094745 - 1094296 - | hypothetical protein CYA_1076 1095538 - 1094789 - | 4'-phosphopantetheinyl transferase family protein CYA_1077 1095621 - 1096982 + | putative cell envelope-related function transcriptional attenuator TERM 814 1097165 - 1097176 + G 72 -4.4 -4.57073 | overlap 1097153 CAGTCTCTCTATTCG GATC GGGA GATC TTTTTGCGAGAGCTG TERM 815 1098575 - 1098555 - g 90 -2.4 -5.47159 | opp_overlap 1098555 CGGTAACACAAAAAA CCCGCAGC GAAAA GCTGGTGG ATCTCTTTCGTCAGG htpG 1097087 - 1098946 + | heat shock protein 90 ribH 1099530 - 1098940 - | riboflavin synthase subunit beta TERM 816 1099020 - 1099003 - G 74 -14.1 -2.87931 | opp_overlap 1099002 TCCACCGGGCAGAGA GGGGCGG GAGG CCGCCCC ATTGCTGGCAGCCCT CYA_1080 1103042 - 1100724 - | TPR repeat-containing protein CYA_1081 1099814 - 1100842 + | LysR family transcriptional regulator TERM 817 1103063 - 1103085 + FH 71 -7.6 -4.15508 | opp_overlap 1103070 GCCCGGCCCAGACCT GGAGAAAGGG GAT CCCTTGCCCC TTTTGGACCTTCCTT CYA_1082 1103204 - 1104745 + | deoxyribodipyrimidine photolyase family protein nrdR 1104814 - 1105416 + | transcriptional regulator NrdR TERM 818 1105519 - 1105464 - f 87 -9.8 -4.65895 | gap 1 GCTCCCATCCAAAAA GCTTAGCGGTATGCTT-GGGTTAGCAA TTG CCGCTTACACTAAGCATAGCGCTAGGC ATCCTCGGCCGGTCG TERM 819 1105989 - 1106005 + G 70 -7.9 -4.08216 | opp_overlap 1105989 1105987 GCTGCTCTTGAAAGA GAGGCTG CTG CAGCCCC TTTTCGAGGGGATGG TERM 820 1106339 - 1106355 + G 100 -12.3 -4.56914 | opp_overlap 1106319 1106339 1106334 GCGCGATCAACATCA CGGATCC CAA GGATCCG TTTTGCTTTGGATGG CYA_1084 1105629 - 1106477 + | hypothetical protein TERM 821 1106572 - 1106548 - T 75 -12.9 -3.15999 | opp_overlap 1106551, overlap 1106551 CCTTGAGATACGCAA CAACCCCCC TTGTATT GGGGGGTTG GTGTGGAGAGATGAG TERM 822 1106569 - 1106551 - T 71 -8.8 -3.72231 | opp_overlap 1106551, overlap 1106548 TGAGATACGCAACAA CCCCCC TTGTATT GGGGGG TTGGTGTGGAGAGAT TERM 823 1109039 - 1109050 + T 74 -7.2 -4.2354 | ATGCTCTCTTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 824 1109277 - 1109298 + T 72 -10.1 -3.695 | opp_overlap 1109276 1109275, overlap 1109279 GGCCGTCCCACAACC CCGCCTAGC CGTA GCTAAGCGG TTTAGGCTCTTTCCC CYA_1090 1112482 - 1111862 - | hypothetical protein lgt-1 1113340 - 1112486 - | prolipoprotein diacylglyceryl transferase TERM 825 1113165 - 1113132 - G 78 -5.1 -4.7497 | gap 1, overlap 1113134 GCCACGTAGTAAAAA CG-GGCAAGGGGCAGG GAT CCCACCACCAGCCACG GCAGCAGATCGGACA TERM 826 1114588 - 1114574 - g 75 -3.5 -4.88918 | gap 1 TTACCTGAAAGAAAA GCC-GG AGAT CCTGGC GGAGGTGGAAGCGGC recA 1113642 - 1114718 + | recombinase A CYA_1093 1115546 - 1114734 - | RNA methyltransferase sun 1116926 - 1115580 - | ribosomal RNA small subunit methyltransferase B TERM 827 1117828 - 1117841 + r 72 -3.9 -4.72007 | opp_overlap 1117826 AAAAACAAGAATGCG GTTTT AACC AAAAC TTTGTTTTCGTCCCA CYA_1095 1118549 - 1118160 - | hypothetical protein CYA_1097 1121986 - 1118585 - | trehalose synthase/putative maltokinase TERM 828 1119482 - 1119470 - G 74 -4.7 -4.57073 | CACCGTCTCGAAAAA CTGCC CCA GGCTG TCCAGCGTGTAGTGC TERM 829 1121816 - 1121789 - G 72 -2.7 -4.74103 | gap 2 CGGGGAAGGGAAAAA GGGCAGCA--GCC AGAT GGCCGTGATGCCC AGATCCTGCAAATAG CYA_1098 1123547 - 1122234 - | hypothetical protein CYA_1099 1124484 - 1123531 - | putative 6-pyruvoyl tetrahydropterin synthase hom 1124636 - 1125982 + | homoserine dehydrogenase hemG 1126034 - 1127491 + | protoporphyrinogen oxidase CYA_1103 1127421 - 1128536 + | hypothetical protein CYA_1102 1128991 - 1128533 - | MAPEG family protein TERM 830 1128696 - 1128682 - G 73 -3.4 -4.71426 | opp_overlap 1128693, overlap 1128683 1128684 GCGCCAGCAAGAAAA CGCCGC AGA GCAGGG CCACCCCTTCGTCGC CYA_1104 1131117 - 1129063 - | arsenite-antimonite ArsAB efflux family transporter ATP-binding protein ArsAB TERM 831 1130370 - 1130356 - G 73 -7 -4.3739 | overlap 1130358 CAGTTGTTGACAAAA GCGGCG CGT CTCCGC CACGCTCAACGGCTC CYA_1105 1131801 - 1131148 - | hypothetical protein CYA_1106 1132674 - 1131805 - | putative iron-sulfur cluster-binding protein CYA_1107 1133100 - 1132684 - | putative iron-sulfur cluster-binding protein CYA_1108 1135141 - 1133198 - | outer membrane receptor (OMR) family protein CYA_1109 1137369 - 1135414 - | hypothetical protein CYA_1110 1137368 - 1138585 + | pentapeptide repeat-containing protein TERM 832 1138567 - 1138581 + FH 71 -11.4 -3.14132 | TCCTGCCGAGCCGCC GGCCTC CCG GAGGCC TTGATCCAGAGCCAA TERM 833 1138966 - 1139000 + G 100 -5.7 -5.40474 | overlap 1138967 CTCATTTTGGATCTG CCGGAGATGGTGC-TGC TGG GCATGC-CCATCGCCGC TTTTTTTGCCACCAT TERM 834 1138967 - 1138999 + G 74 -9.2 -3.83561 | overlap 1138966 TCATTTTGGATCTGC CGGAGATGGTGC-TGC TGG GCATGC-CCATCGCCG CTTTTTTTGCCACCA TERM 835 1139060 - 1139089 + G 75 -4.1 -4.74132 | opp_overlap 1139054 GCGAGATTACCGCCA TGCGGGCAGCCGG GATC CCGTTTACGCGCA TTTTTCGTCCCCTGT CYA_1111 1138774 - 1139904 + | YjgP/YjgQ family protein TERM 836 1139942 - 1139958 + F 73 -12.3 -3.02324 | opp_overlap 1139928 1139927 1139939 1139942 CCCCCGACCTAACCA GGGATCC ACC GGATCCC TATAGTTTCCGTCCC TERM 837 1139958 - 1139942 - f 71 -12.3 -2.75064 | opp_overlap 1139942, overlap 1139928 1139927 1139939 CCCCCGACCTAACCA GGGATCC ACC GGATCCC TATAGTTTCCGTCCC TERM 838 1140608 - 1140590 - f 81 -10.3 -4.07568 | CCCTTGCGGGGAAAA GGTAGGG ATCAA CCCTACC CCCGGAAAAGGCTGA TERM 839 1141116 - 1141094 - g 100 -11.2 -4.8083 | GAAGACTACCAAAAA GCGGGGGCCA AGC TGGCCGCCAC CCCTGAGGAGATCTA TERM 840 1141658 - 1141676 + G 71 -5.8 -4.25104 | GGAGCGGTGTTGGTG CCGGGCAG ACG CGCCCCGG TTTTGGTGAAGGAAG ald 1140938 - 1142029 + | alanine dehydrogenase CYA_1113 1142671 - 1142039 - | 3'-5' exonuclease family protein rpsN 1143216 - 1142911 - | 30S ribosomal protein S14 TERM 841 1143097 - 1143133 + gH 78 -13.1 -3.28745 | gap 1, overlap 1143093 GTGCAGCTCCATGCG GGTGGCC-TGGTCGAT GTTGGG ATCGGCCATGGCCGCC TTGAGTTGTTGGCGC CYA_1115 1143110 - 1143379 + | hypothetical protein CYA_1117 1143361 - 1143684 + | hypothetical protein CYA_1116 1145201 - 1143681 - | GTP-binding protein TERM 842 1145235 - 1145245 + r 71 -6.8 -4.35524 | opp_overlap 1145220, overlap 1145228 CCGTTCGCGTCAGCG GGAC GGA GTCC TTTTGACTTTACCCG CYA_1118 1145773 - 1145282 - | hypothetical protein TERM 843 1145738 - 1145752 + g 78 -7 -4.60924 | opp_overlap 1145729 1145737, overlap 1145726 ACAGCAGCCCAAAGG GGCGGC ACA GCCGAC TTTTTGGGGGCTTTC TERM 844 1146313 - 1146302 - g 71 -5.8 -4.3586 | TGAGCGAGATCAAAA GCAC GATT GTGC AGCAAATTATTCAAA CYA_1119 1146148 - 1146600 + | hypothetical protein recJ-1 1148851 - 1146623 - | single-stranded-DNA-specific exonuclease RecJ TERM 845 1146992 - 1147002 + g 78 -6.8 -4.56597 | GGGCCAGCGGGCCAG CAGC AGA GCTG TTTTTGCCGACGGGA TERM 846 1148618 - 1148631 + g 84 -4.5 -5.10461 | opp_overlap 1148618 GTCTCCCCAAATGCA GAGGG TTTC TCCTC TTTTTCTTGCCTGCA TERM 847 1148883 - 1148873 - R 79 -6.8 -4.75472 | overlap 1148874 TCGACAGGAATAAAA CTCC CTG GGAG CCTATCAAAAACTGC CYA_1121 1148995 - 1148888 - | hypothetical protein TERM 848 1149295 - 1149269 - H 78 -12.2 -3.54029 | opp_overlap 1149272, overlap 1149270 TCGCAGCAACCACAA CTCCCCTCTCCC AAA GGGAGAGGGGCT GGGGGTGAGGGTATC TERM 849 1149294 - 1149270 - H 82 -15.7 -2.72096 | opp_overlap 1149272, overlap 1149269 CGCAGCAACCACAAC TCCCCTCTCCC AAA GGGAGAGGGGC TGGGGGTGAGGGTAT CYA_1122 1149396 - 1150319 + | Ser/Thr protein phosphatase family protein cysH 1150395 - 1151141 + | phosophoadenylyl-sulfate reductase CYA_1124 1151170 - 1151457 + | antibiotic biosynthesis monooxygenase domain-containing protein CYA_1125 1151589 - 1151933 + | ArsR family transcriptional regulator TERM 850 1152171 - 1152193 + F 77 -11.3 -3.62597 | gap 1 CAGCTACCTTGACAC TCCCACCGCC TAAA GGCGG-GGGA TTCTTACGCAGTCCA TERM 851 1152319 - 1152342 + F 71 -4.4 -4.60889 | CAGCATTCGCCTCAG CCCAGAGGGT CTCC ACCCGTCGGG TTTTTCACCATAATT CYA_1126 1152554 - 1152952 + | ISSoc4, transposase orfA CYA_1127 1152934 - 1153500 + | ISSoc4, transposase orfB CYA_1128 1154107 - 1153631 - | ISSoc3, orfA transposase TERM 852 1154470 - 1154438 - H 74 -2.7 -5.00616 | gap 1 CCTCGCTTCAAAAAA GCGGGGGAGT-TGA GATCCT TCACATTTCCCCGC ATCAACGGCCCCGGC TERM 853 1155583 - 1155602 + G 81 -4.2 -5.05782 | gap 1 GCCACCTACGAGGGG GC-CCGCAG CAT CTCCGGAGC TTTTTTGGGATCCCT CYA_1131 1155508 - 1156698 + | major facilitator transporter CYA_1130 1157719 - 1156649 - | EAL domain-containing protein TERM 854 1156717 - 1156703 - G 80 -5.6 -4.72272 | overlap 1156705 CCGGGCGATGAAAAA GCCCTG CAC CAGGTC CACCCCGTGGTCGCG TERM 855 1157836 - 1157823 - R 73 -8.1 -4.08485 | CTTACGGAAAGCAAA CTGGG AATC CCCAG CGTCAGGACAGGATC CYA_1132 1158648 - 1157890 - | glyoxalase II family protein TERM 856 1157938 - 1157928 - G 74 -4.6 -4.57569 | opp_overlap 1157928 GCAGCCGGGCAAAAA CCCG CAC CGGA TCTTGAGCGCCCGTA CYA_1133 1158912 - 1158655 - | hypothetical protein CYA_1134 1159444 - 1159046 - | DnaJ domain-containing protein rpmF 1159721 - 1159539 - | 50S ribosomal protein L32 CYA_1136 1161290 - 1160019 - | ISSoc3, orfB transposase TERM 857 1160883 - 1160915 + gH 93 -8.5 -5.00616 | gap 1, opp_overlap 1160882 CTTGGGGCAATTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGGGG TERM 858 1161630 - 1161643 + GH 75 -4.5 -4.71776 | AGCAAGCCTGTATTT TGGGC AGGG GCCTA TTTTGTTGCCTCTTG CYA_1137 1161246 - 1161722 + | ISSoc3, orfA transposase TERM 859 1162032 - 1162044 + G 76 -6.9 -4.4518 | CAACCCACCACTCGC CCGCG CGT TGCGG TTTTGGATTTTGATT TERM 860 1162811 - 1162758 - g 73 -11.1 -3.59979 | gap 1 GTTCGCGAGGTTAAA GATCCGGCCA-CGGGGGCAGTC CTGCGCAAATT GACTGAGCCCGCTGGCCAGATC CAACTGACAGAGGTG CYA_1138 1161810 - 1162904 + | CsgG family protein TERM 861 1163448 - 1163467 + G 72 -2.1 -4.70353 | overlap 1163458 GGATGTAGCCAAGGC CAAAGGG ATCCAA CACTTTG TTTTGATTTCTTCTC CYA_1139 1163149 - 1163808 + | 3-beta hydroxysteroid dehydrogenase/isomerase family protein TERM 862 1165243 - 1165233 - g 72 -2.4 -4.72029 | opp_overlap 1165233, overlap 1165223 1165234 TTTAACGGAAGAAAA GCGG CCA CAGC TATTTTCCGCGCTGG CYA_1140 1163923 - 1166457 + | hypothetical protein CYA_1141 1166464 - 1166559 + | hypothetical protein CYA_1142 1166505 - 1166915 + | hypothetical protein TERM 863 1167884 - 1167870 - g 80 -5.7 -4.68424 | opp_overlap 1167876 1167877 CAACCGACGCAAAAA GGATC GACGG GATCC CCGCTTTCGCCGCCA CYA_1143 1167658 - 1167912 + | HNH endonuclease domain-containing protein CYA_1144 1168946 - 1167978 - | putative aminomethyltransferase TERM 864 1168955 - 1168971 + H 74 -4.4 -4.84311 | opp_overlap 1168944, overlap 1168954 1168948 GAGACATCGCTCACC CCAGAG ATGGG CTTTGG TTTTCTTCTCTACCC TERM 865 1169351 - 1169341 - g 74 -4.6 -4.56597 | opp_overlap 1169350 CCCGTCCTGCAAAAA GACC GTT GGCC GGATCCCGATTTTCA TERM 866 1169598 - 1169608 + G 71 -8.2 -3.92869 | AGCCCTGCAGCTTTT GCGG CGA CCGC TTTCTCGCTGCCTCC TERM 867 1170457 - 1170478 + G 72 -7.3 -4.18018 | gap 1, opp_overlap 1170442 1170439, overlap 1170460 GGTGAAGCCTCCGGC TTGCCCACCC GCT GGGTGG-CGA TTTTGGATAGCCGCA CYA_1145 1169041 - 1170579 + | hypothetical protein CYA_1147 1170710 - 1170904 + | hypothetical protein CYA_1146 1171863 - 1170901 - | auxin efflux carrier (AEC) family protein ispH 1173149 - 1171869 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 868 1172984 - 1172998 + g 71 -4.9 -4.45517 | ACTGGGCGCGGATCT GCTCC ACCAG GGGGC TTTTGTAGGTGGTTT CYA_1149 1173572 - 1173297 - | hypothetical protein CYA_1150 1174071 - 1173595 - | pentapeptide repeat-containing protein glmU 1176054 - 1174189 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 869 1174590 - 1174564 - G 74 -9.3 -3.96148 | opp_overlap 1174564 1174572 1174583, overlap 1174565 GGCGCTGAGGACAAA CCCCGCCTGCA GGGGT TGCTGGCGGGC AAAGCGCTCCAATTC TERM 870 1174589 - 1174565 - G 71 -12.8 -2.97475 | opp_overlap 1174564 1174572 1174583, overlap 1174564 GCGCTGAGGACAAAC CCCGCCTGCA GGGGT TGCTGGCGGG CAAAGCGCTCCAATT CYA_1152 1176173 - 1176601 + | hypothetical protein CYA_1153 1176916 - 1177371 + | Rieske family iron-sulfur cluster-binding protein CYA_1154 1177432 - 1178553 + | glycosyl transferase, group 1 family protein TERM 871 1179159 - 1179114 - g 78 -11.8 -3.72576 | TCTCTGCTGATGAAA TCGTCTCCATCGGCGGCGAT CGCCTC ATCGTGGCCGATGGCGCCGA AACCCGCCTAGCCCA CYA_1155 1178651 - 1179544 + | PRC-barrel domain-containing protein TERM 872 1179661 - 1179649 - T 75 -2.6 -5.0538 | overlap 1179652 CTGGATTGGAAAAAA CCAG ACTGA CCGG ACAGTCGCCGCAAAA CYA_1156 1180696 - 1179716 - | alpha/beta fold family hydrolase TERM 873 1179856 - 1179881 + g 79 -8.3 -4.30995 | gap 1 AGGCACGATACCGCT CCGCCTGTTCTG ATC CAGTA-AGGCGG TTGTTTTCTCCCCAG TERM 874 1179995 - 1179969 - G 78 -3.6 -5.00616 | gap 1, overlap 1179972 1179974 TTGCCGGTCAAAAAA GAACGGGGGGC AAATTG GGCCCCCG-CC TGGTGGGCCGCCTGA TERM 875 1179993 - 1179972 - G 86 -8.6 -4.61482 | overlap 1179969 1179974 CCGGTCAAAAAAGAA CGGGGGGC AAATTG GGCCCCCG CCTGGTGGGCCGCCT TERM 876 1180647 - 1180668 + g 76 -8.6 -4.11484 | AGGGCACTTACCCCG CCGGCCGC AACCCA GAGGCCGG TTTTGAGAACTTGGC infA 1180950 - 1180726 - | translation initiation factor IF-1 map-2 1181854 - 1181081 - | methionine aminopeptidase adk 1182474 - 1181893 - | adenylate kinase secY 1183772 - 1182474 - | preprotein translocase subunit SecY TERM 877 1183874 - 1183860 - R 75 -10 -3.83378 | CGGCAAAATAGAGAA GCTGCA AAC TGCAGC CCAATTTTAGGATCC rplO 1184354 - 1183881 - | 50S ribosomal protein L15 rpsE 1184914 - 1184378 - | 30S ribosomal protein S5 TERM 878 1184662 - 1184678 + g 72 -4.4 -4.62069 | GACCCTTGGTGAGGG GCACTT CGATT AGGTGC TTTTTGCCATCCACA rplR 1185301 - 1184933 - | 50S ribosomal protein L18 rplF 1185849 - 1185304 - | 50S ribosomal protein L6 rpsH 1186280 - 1185876 - | 30S ribosomal protein S8 rplE 1186883 - 1186341 - | 50S ribosomal protein L5 rplX 1187338 - 1186940 - | ribosomal protein L24 rplN 1187706 - 1187338 - | 50S ribosomal protein L14 TERM 879 1187427 - 1187415 - G 81 -10.5 -4.10657 | opp_overlap 1187426 CTACAGGGCCGAAAA CGCGG GTT CCGCG GGGGTTGCCGTCGTC rpsQ 1187954 - 1187703 - | 30S ribosomal protein S17 rpmC 1188190 - 1187954 - | 50S ribosomal protein L29 rplP 1188684 - 1188208 - | 50S ribosomal protein L16 rpsC 1189486 - 1188740 - | 30S ribosomal protein S3 rplV 1189899 - 1189528 - | 50S ribosomal protein L22 rpsS 1190223 - 1189942 - | ribosomal protein S19 rplB 1191186 - 1190302 - | 50S ribosomal protein L2 TERM 880 1190997 - 1191045 + g 81 -4.2 -5.05782 | overlap 1191008 GGTAGAGCCGCTTGT GGCCGCCGCCTCGGTGGCGGCA GGTGA TGACGCCGCGGTTGTTGCGCCC TTTTTTGCGGTGGAT rplW 1191546 - 1191247 - | 50S ribosomal protein L23 rplD 1192519 - 1191539 - | ribosomal protein L4 TERM 881 1192295 - 1192315 + g 95 -10.3 -4.65895 | opp_overlap 1192288 1192292, overlap 1192293 GGAGCGAATGGAGCC GGCGCGGGC CCG GCCGGTGCC TTTTTGCCTCCAGGG rplC 1193215 - 1192571 - | 50S ribosomal protein L3 TERM 882 1192970 - 1193002 + g 71 -9.7 -3.74693 | GTCGACCCGGAACTC GCGCAGGTGGCGCAG CAG CTCCGTCACCCCCGC TTTGCTCAGGTGGCC TERM 883 1193373 - 1193358 - H 73 -5.4 -4.56636 | AAAAAGCAACGAAAA GGAATC TTTG GATCCC CGCAGGCCAAACAGC TERM 884 1193401 - 1193385 - H 72 -10.1 -3.59979 | opp_overlap 1193384 1193393 TCCCCGCAGGCCAAA CAGCGCC AGC AGCGCTG CTCCCTTTGCTTAAT TERM 885 1193756 - 1193781 + G 78 -4.7 -4.72272 | overlap 1193751 1193764 TGGATTTGTTGCGGG CGGGATCCG ATCCGGGC CGGATCTTG TTTTTGGTGCGCAGC TERM 886 1193764 - 1193778 + G 95 -10 -4.47707 | overlap 1193751 1193756 TTGCGGGCGGGATCC GATCCG GGC CGGATC TTGTTTTTGGTGCGC TERM 887 1195100 - 1195116 + G 74 -5.1 -4.56597 | overlap 1195082 GCGGGCCCTCCCTGG CCGCT TTCTTCC AGCGG TTTTTCGCCGAGCAC CYA_1179 1193692 - 1195644 + | hypothetical protein TERM 888 1195886 - 1195852 - f 79 -3.5 -5.03747 | gap 2, overlap 1195841 1195854 AAACCGGCGAAAAAA CAGCC-G-CTCCTCTCG GCC CGACAGGCGGCAGGCCG CTTCCGGCGGGGGGA TERM 889 1196072 - 1196056 - f 74 -12.3 -3.21218 | ATGCTGCACTACCAA CAGGCCA TCG TGGCCTG TCCCCCTGCTGCTCC TERM 890 1197036 - 1197018 - g 78 -3 -5.09762 | overlap 1197019 1197020 GGTGAAGAAAGAAAA TCCCTGGT ACT ACCAGGTC TCCAAATGCGCTCCT TERM 891 1197632 - 1197666 + G 79 -9.3 -4.17089 | opp_overlap 1197621 1197633, overlap 1197633 AGAACCTGCTTAAGA ACCACAAGCTGGCAG GAGCG CTGTCAGATTGTGGC TTTTACGAGTTTCGG TERM 892 1197665 - 1197633 - g 70 -10.6 -3.62522 | opp_overlap 1197633 1197632, overlap 1197621 GAACCTGCTTAAGAA CCACAAGCTGGCAG GAGCG CTGTCAGATTGTGG CTTTTACGAGTTTCG TERM 893 1197633 - 1197665 + G 71 -12.8 -3.09772 | opp_overlap 1197621 1197633, overlap 1197632 GAACCTGCTTAAGAA CCACAAGCTGGCAG GAGCG CTGTCAGATTGTGG CTTTTACGAGTTTCG CYA_1181 1196824 - 1198029 + | ISSoc7, transposase CYA_1182 1198072 - 1198404 + | hypothetical protein CYA_1183 1198401 - 1199069 + | hypothetical protein TERM 894 1199164 - 1199184 + F 71 -4.8 -4.52589 | gap 1, overlap 1199164 TGTCTTGCGGGATCC GGG-GATAA GGCT TTATCTCCC TTTTATCTCGCCGGA CYA_1184 1199237 - 1199788 + | hypothetical protein CYA_1185 1199739 - 1199873 + | hypothetical protein metK 1201317 - 1200073 - | S-adenosylmethionine synthetase TERM 895 1201611 - 1201593 - R 77 -7.4 -4.386 | opp_overlap 1201593 GAAGTCGTCAGAAAA GTCCCCCT GGC AAGAGGAC TGTCCTCTAGAGAAA CYA_1187 1202182 - 1201814 - | putative lipoprotein TERM 896 1202479 - 1202446 - g 80 -5.9 -4.68103 | overlap 1202447 1202448 1202471 GGAAGCCGAACAAAA CCGGCGACACCGC CAAAGGAT GCAACGCCGCCAG CAGATCCAGCGGCAG cobO-1 1202372 - 1203058 + | cob(I)alamin adenosyltransferase cobB 1203076 - 1204482 + | cobyrinic acid a,c-diamide synthase TERM 897 1204501 - 1204489 - f 71 -4.7 -4.64861 | overlap 1204491 CCCGCTTAAAATAAA GCGGC GAT GCAGC CCCAGTCTCCCGTTG CYA_1190 1205228 - 1205575 + | hypothetical protein CYA_1192 1206003 - 1205839 - | hypothetical protein TERM 898 1206371 - 1206389 + G 75 -4.4 -4.72272 | CATCTGCATTGGCTT GGCCGCCA GCA TGGGAGCC TTTTTGCTGGCAGGA TERM 899 1206545 - 1206530 - g 73 -3.2 -4.72272 | CCTCTTTATCAAAAA CAGTCT CAAC AGCCTG CTGGCCTACCACACT clpP 1206093 - 1206695 + | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 900 1206727 - 1206745 + F 95 -13.2 -4.4267 | opp_overlap 1206723 AGACAAACCCACCCA GCTCCCTT CTC AAGGGAGC TTTTGCCTTTTCCAG TERM 901 1207246 - 1207233 - g 77 -2.3 -5.01042 | overlap 1207234 AACCCAAACCAAAAA GGGCT ATCA AGCCG GCGTAAAGGATTACC rbcL 1207204 - 1208628 + | ribulose bisophosphate carboxylase rbcX 1208699 - 1209106 + | chaperon-like protein RbcX cbbS 1209115 - 1209447 + | ribulose bisphosphate carboxylase, small subunit TERM 902 1209492 - 1209510 + T 100 -13.2 -4.86861 | CAGCCAATCGGCGCA GAGGGAGA GCT TCTCCCTC TTTATTTATTTCTTG CYA_1197 1210511 - 1209705 - | hypothetical protein TERM 903 1210700 - 1210662 - gR 70 -10.2 -3.23572 | opp_overlap 1210654, overlap 1210660 1210663 ACCTATTGTAGAAGA TGGGATCCCACCCGGCAA CTG TTCTCGAGCGGGATCCCT GCTGCAGCTCAGTTC TERM 904 1210699 - 1210663 - gR 75 -13.7 -2.53822 | opp_overlap 1210654, overlap 1210662 1210660 CCTATTGTAGAAGAT GGGATCCCACCCGGCAA CTG TTCTCGAGCGGGATCCC TGCTGCAGCTCAGTT CYA_1199 1211260 - 1210709 - | hypothetical protein TERM 905 1211039 - 1211015 - Gg 85 -3.4 -5.24531 | overlap 1211020 ATTTTTCACAAAAAA GCGAATGCGG CTGGC CCGCAGCGGC TGCCCCTGCCAGTGC CYA_1200 1210661 - 1211167 + | hypothetical protein CYA_1201 1211787 - 1212764 + | PhoH family protein CYA_1203 1212761 - 1213486 + | haloacid dehalogenase, IA family protein CYA_1202 1214252 - 1213464 - | alpha/beta fold family hydrolase TERM 906 1213873 - 1213830 - G 72 -3.7 -4.57073 | gap 1, overlap 1213832 TAGCTCCGCCAAAAA TCCCAGCCCCCGCTCCGCCA TCTGG TGGTAGAGCGCCGGC-GGCA AAAAAGGCAGGAGAA TERM 907 1213899 - 1213879 - G 83 -5.4 -5.00616 | overlap 1213894 GCCGGCGGCAAAAAA GGCAGG AGAACATGA CCTGCC CACCACCAGGGCCGG CYA_1204 1214983 - 1214240 - | acyltransferase family protein TERM 908 1214482 - 1214463 - G 78 -3.5 -5.07053 | AACCAGCGGAAAAAA GCCATGG GAATAT CCATCGC CCGCCACTCTTCCTG cobO-2 1216128 - 1214995 - | hypothetical protein TERM 909 1216245 - 1216230 - H 72 -2.4 -4.84761 | overlap 1216231 1216232 AGAGGGCCAGAAAAA GCCGGC AAGA GCCGAT AAACACCGGGATAAG CYA_1206 1216339 - 1217253 + | putative cysteine synthase B CYA_1208 1217972 - 1217481 - | pentapeptide repeat-containing protein TERM 910 1218005 - 1218025 + H 74 -7.5 -4.30014 | opp_overlap 1218009, overlap 1218012 AAAAGTTGACTGAGA CAATCCGGC AGA GCGGGGTTG TTTTGCGTTGGTCAC TERM 911 1218275 - 1218304 + H 85 -12.9 -3.72576 | opp_overlap 1218288 1218291, overlap 1218276 GCAATCCTAGCGGGT TGCCAGCCGAG AAGGATGG CTCGGCTGGCG TTTCCTCCGGCCGGG TERM 912 1218276 - 1218303 + H 79 -14.2 -2.83403 | opp_overlap 1218288 1218291, overlap 1218275 CAATCCTAGCGGGTT GCCAGCCGAG AAGGATGG CTCGGCTGGC GTTTCCTCCGGCCGG CYA_1209 1218655 - 1219383 + | hydrophobic amino acid uptake transporter ABC transporter family ATP-binding protein CYA_1210 1220859 - 1219396 - | pyruvate kinase TERM 913 1221586 - 1221599 + G 72 -3.7 -4.56597 | opp_overlap 1221564 GAGATCCTCGCGCCC GAGCC AGAC GGCAC TTTTTCCCGCCGGCA CYA_1211 1221034 - 1222236 + | YjgP/YjgQ permease CYA_1212 1223261 - 1222248 - | phosphate ABC transporter substrate-binding protein TERM 914 1222321 - 1222339 + g 86 -6.6 -5.0538 | opp_overlap 1222321 1222322 1222324, overlap 1222322 GCATAGTTGATGAAA TCAGCCAC CAC GGGGCTGG TTTTTTGCGGTACCA TERM 915 1222372 - 1222362 - G 72 -2.4 -4.77036 | CGGTACCACCAAAAA CACG TTG CGGG CCAGCGGGTAGCGGC CYA_1213 1225405 - 1223354 - | VacB/RNB family exoribonuclease TERM 916 1223739 - 1223706 - G 100 -10.3 -5.00616 | overlap 1223707 TCCCCGCGCAAAAAA GCCTTGATCTGGTAG TGGG CCACCAGATCCAGGT AGCGGCGAATGGGAG TERM 917 1223738 - 1223707 - G 81 -13.8 -3.60048 | overlap 1223706 CCCCGCGCAAAAAAG CCTTGATCTGGTAG TGGG CCACCAGATCCAGG TAGCGGCGAATGGGA TERM 918 1225661 - 1225679 + H 84 -3 -5.4505 | GGGGAAACTGACGAA CCGGCTAG AGG TTGGCAGG TTTTTTCTTGGCGCC CYA_1214 1225785 - 1226417 + | LuxR family DNA-binding response regulator CYA_1215 1226617 - 1227825 + | coenzyme F420 hydrogenase/dehydrogenase family protein CYA_1216 1229044 - 1227848 - | aspartate aminotransferase TERM 919 1228492 - 1228478 - G 78 -3.4 -5.0133 | opp_overlap 1228481, overlap 1228457 1228481 CACTGCTTCAAAAAA GGAGCG GGT CGCCAC CGCTGTTGTCGGGTT engA 1229210 - 1230589 + | GTP-binding protein EngA smpB 1230625 - 1231089 + | SsrA-binding protein CYA_1219 1231877 - 1231275 - | glutathione S-transferase era 1233025 - 1231949 - | GTP-binding protein Era CYA_1221 1234773 - 1233034 - | SpoIID/LytB domain-containing protein TERM 920 1233538 - 1233526 - G 74 -5.5 -4.431 | CAGCGACTGAGAAAA CTCCC AGC GGAAG AGGCGCGATACCCCT CYA_1223 1235773 - 1235330 - | putative Bdr protein CYA_1224 1236822 - 1235827 - | AAA family ATPase TERM 921 1236914 - 1236896 - H 79 -8.1 -4.4009 | opp_overlap 1236896, overlap 1236881 GGGGATCCCACAAAA CCCCGGT GGAAA ACCGGAG TATCATAGACCTGAT CYA_1226 1236952 - 1237392 + | rrf2 family protein CYA_1225 1237547 - 1237389 - | hypothetical protein TERM 922 1237702 - 1237719 + GH 74 -4.8 -4.59773 | gap 1, overlap 1237700 1237702 GCGCTGGTGGATATC GG-CGGC AAGTC GCCGGCC TTTTTGCCCCTGAAA CYA_1227 1237546 - 1238460 + | putative ribosomal protein S1 CYA_1228 1238961 - 1240181 + | putative S-layer protein CYA_1229 1240980 - 1240339 - | ExoD family protein TERM 923 1240602 - 1240623 + g 72 -4.3 -4.66609 | overlap 1240600 GGCTGGTGCAGACTG GTTGCCAAC GGGG GCAGGCAAC TTTTTCAATGCGCTG CYA_1230 1242302 - 1241544 - | GvpL/GvpF family gas vesicle protein CYA_1231 1243389 - 1242268 - | nucleotidyl transferase family protein TERM 924 1243086 - 1243073 - GH 77 -2.3 -5.00616 | GTGCTGTCGAAAAAA CCGGA AAAA TCCTG GATCTTGCGCATGCC hisG 1243652 - 1244401 + | ATP phosphoribosyltransferase catalytic subunit psbO 1244601 - 1245395 + | photosystem II manganese-stabilizing protein TERM 925 1245413 - 1245453 + F 77 -11.8 -3.27259 | overlap 1245415 1245416 1245418 AGAGCAAATTTTGGG CTTGAGGGGGCAGGGATC CGGTC GATCCCTGCTCACTCCTG TTGATACTCTGTCTG TERM 926 1245415 - 1245451 + G 73 -13 -3.19563 | overlap 1245413 1245416 1245418 AGCAAATTTTGGGCT TGAGGGGGCAGGGATC CGGTC GATCCCTGCTCACTCC TGTTGATACTCTGTC TERM 927 1245416 - 1245450 + G 79 -16.5 -2.51256 | overlap 1245415 1245413 1245418 GCAAATTTTGGGCTT GAGGGGGCAGGGATC CGGTC GATCCCTGCTCACTC CTGTTGATACTCTGT CYA_1234 1245414 - 1245695 + | hypothetical protein TERM 928 1247219 - 1247201 - g 76 -9.6 -4.00868 | TGAGCGAGAACGAAA TCCAACAG CGG CTGCTGGA GCTCCTCAACCAGGC CYA_1235 1246105 - 1247484 + | putative lipoprotein CYA_1236 1247523 - 1247939 + | hypothetical protein TERM 929 1248497 - 1248461 - gT 73 -12.9 -2.64155 | overlap 1248458 TGGCCGGCAAACTCA CCCTGCCCGATCACCCC CGG GAGGTGATCGGGCTCGT CCTCAAAAAGCTGGG TERM 930 1248704 - 1248730 + GT 74 -13.1 -2.80622 | gap 1 ACCCCGAGCTGGAGG TGGC-GATCCCG GCTT CGGGATCCGCCA TCTGGTGGGATGTCT CYA_1237 1247911 - 1249035 + | polyamine ABC transporter, polyamine-binding protein tig 1250778 - 1249105 - | trigger factor TERM 931 1250356 - 1250395 + g 70 -10 -3.65812 | overlap 1250372 CTGGTCGATCTGTTC GGGCTTGACGGTGACG CGGGTGGC CGTGACGGTCAGGCCC TTGTATTGGCCGACA CYA_1239 1251250 - 1250867 - | hypothetical protein CYA_1240 1252369 - 1251335 - | cytochrome c assembly protein CYA_1241 1252474 - 1253853 + | hypothetical protein TERM 932 1254780 - 1254756 - g 78 -6.4 -4.59853 | gap 1, opp_overlap 1254774 1254778, overlap 1254774 GGAAGCGGCCAAAAA GCGCATGGTGG AATG CAACC-TGCGC CTGGTGGTGTCGATT TERM 933 1254984 - 1254964 - g 80 -6.1 -4.68908 | gap 1 GGCATCCAAAACAAA GGGC-GCC TGATCC GGCTGCCC GCCCACATGTACGAG CYA_1243 1254523 - 1255479 + | RNA polymerase sigma factor gcvT 1256599 - 1255463 - | glycine cleavage system aminomethyltransferase T TERM 934 1256129 - 1256106 - G 78 -3 -5.0133 | GATCCCGCCAAAAAA GGCTGCAAAA CCTC TTCGGCTGCC GGCCCCTGCACCGCC TERM 935 1256781 - 1256762 - g 78 -2.8 -5.00616 | gap 1, overlap 1256764 1256767 TTGCTCCGCAAAAAA GACTACCCC AGC GGGG-AGTT CACGCTGGCCTACGT gloA 1256666 - 1257100 + | lactoylglutathione lyase CYA_1245 1258216 - 1257125 - | TonB family protein TERM 936 1257240 - 1257230 - G 86 -8.2 -4.60041 | opp_overlap 1257233, overlap 1257231 1257232 AGGCAGGGGCAAAAA GGGC GCC GCCC GCTGAATTGCTGTCA TERM 937 1258664 - 1258640 - g 85 -9.9 -4.2828 | CCTCACCCAGGAAAA GCTGACGCCCC AGC GGGGCATCTAC CCCCGCCACTTTGGC TERM 938 1258787 - 1258799 + G 71 -4.7 -4.40963 | overlap 1258772 TGTCGGCACCCCCCT GGAGC ACG GCACC TTCTTTTTGCAGGAT CYA_1246 1258476 - 1258955 + | glyoxalase family protein CYA_1247 1258973 - 1259830 + | hypothetical protein TERM 939 1260582 - 1260554 - f 75 -9.6 -3.74347 | gap 1, opp_overlap 1260550 1260554 1260555, overlap 1260548 1260555 CCTAGAAATTGGAAA CGCCCAGGGAGTT TAAG AACTCCC-GGGCT TGCTTTAGCCACGCG TERM 940 1260581 - 1260555 - f 74 -13.1 -2.84126 | gap 1, opp_overlap 1260554 1260550 1260555, overlap 1260548 1260554 CTAGAAATTGGAAAC GCCCAGGGAGTT TAAG AACTCCC-GGGC TTGCTTTAGCCACGC TERM 941 1260555 - 1260581 + F 79 -13.1 -3.51232 | gap 1, opp_overlap 1260548 1260555 1260554, overlap 1260554 1260550 CTAGAAATTGGAAAC GCCCAGGGAGTT TAAG AACTCCC-GGGC TTGCTTTAGCCACGC TERM 942 1261603 - 1261574 - g 83 -7.8 -4.65895 | overlap 1261576 1261577 CCCTGCAGGCAAAAA CAGCCCATCCCA GAGCCT TGGGATGGGGGG TGGGGGAGTTTTTCC TERM 943 1261601 - 1261576 - g 74 -9 -3.94812 | overlap 1261574 1261577 CTGCAGGCAAAAACA GCCCATCCCA GAGCCT TGGGATGGGG GGTGGGGGAGTTTTT TERM 944 1261600 - 1261577 - g 70 -12.5 -2.96405 | overlap 1261576 1261574 TGCAGGCAAAAACAG CCCATCCCA GAGCCT TGGGATGGG GGGTGGGGGAGTTTT menC 1260709 - 1261710 + | O-succinylbenzoate synthase TERM 945 1262420 - 1262460 + F 80 -5.1 -4.91109 | CCCAGTCTTGGGCAT CGGTTCCCCCCGCGCCAGC GGT GATGGTGAGGATGGCGCCG TTTTTGTCGTAGGGG CYA_1251 1263140 - 1263502 + | hypothetical protein CYA_1250 1264620 - 1263499 - | putative methyl-accepting chemotaxis protein TERM 946 1264036 - 1264050 + g 83 -7.8 -4.59773 | opp_overlap 1264025, overlap 1264014 CAAAGCCAGGTTTTG GCTGAG GAT CTCGGC TTTTTGCCGCTCCAG CYA_1252 1266106 - 1264886 - | GAF domain-containing protein TERM 947 1265592 - 1265573 - G 74 -5.6 -4.4009 | overlap 1265574 TTCCAGCTCAGAAAA CGGCTGGC TCCA GTCAGCCA CCTGGTCGGGCGCCA pth 1266259 - 1266936 + | peptidyl-tRNA hydrolase CYA_1254 1268219 - 1266981 - | hypothetical protein TERM 948 1267415 - 1267399 - G 88 -3.7 -5.28778 | AGCACCCACAAAAAA GTCCA GCCCCCT TGGAC GATGGCCACCACCAA CYA_1255 1269422 - 1268403 - | hypothetical protein TERM 949 1269682 - 1269710 + r 75 -9.6 -3.86346 | gap 1, opp_overlap 1269676, overlap 1269685 GTCAGGTAAGCGGGG CAACCCCACCCGT CCAT ACGG-TGGGGTAG TTTATGAGAGCATGA TERM 950 1269880 - 1269902 + r 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC leuS 1272645 - 1270024 - | leucyl-tRNA synthetase petH 1273664 - 1272774 - | ferredoxin--NADP reductase prk 1273982 - 1274989 + | phosphoribulokinase TERM 951 1275709 - 1275672 - g 72 -14.1 -2.72344 | overlap 1275655 CGCGATCGTCAAGGA GGCGCTGACAACGGAGG CCCA CCTGCCCTGCCAGCGCC TCAACCCCCAAGGAC pgl 1275064 - 1275795 + | 6-phosphogluconolactonase CYA_1260 1275911 - 1276081 + | hypothetical protein CYA_1262 1277778 - 1278923 + | hypothetical protein TERM 952 1279394 - 1279369 - g 72 -7.5 -4.12188 | gap 1 GGAGCACCCCGAAAA TGACCACCTGCC CCT GGC-GGAGGCCA GCCGCCTGTGCAACC TERM 953 1279432 - 1279444 + G 74 -4.8 -4.64861 | CGTCAGCAAGTGCCA GCAG TTGAT CTGC TTTGTTTTCCACGAC CYA_1263 1279028 - 1279534 + | hypothetical protein minC 1279684 - 1280436 + | septum formation inhibitor minD 1280433 - 1281239 + | septum site-determining protein MinD minE 1281330 - 1281692 + | cell division topological specificity factor MinE TERM 954 1281682 - 1281715 + F 76 -13.3 -2.73468 | gap 1 GCCATTTGAGCTCGC CTTCTCCCTGAG-CTA CCC TAGACTCAGGGAGCAG TAATTCAAGGTGTTA TERM 955 1282278 - 1282288 + G 100 -8.2 -5.30616 | TGGGGGAGTTTCCCT GGCC CCT GGCC TTTTTGTTTGGATCC TERM 956 1283576 - 1283598 + G 100 -12 -4.58395 | opp_overlap 1283580, overlap 1283570 ATGCCCATCTCGGAA GGGATCCGCA CCC TGCCGATCCC TTTTTCCCAACTGCA CYA_1268 1281926 - 1284115 + | monovalent cation:proton antiporter-2 (CPA2) family protein CYA_1267 1284456 - 1284112 - | hypothetical protein CYA_1269 1285112 - 1284501 - | hypothetical protein holB 1286150 - 1285137 - | DNA polymerase III subunit delta' accB 1286754 - 1286275 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein efp 1287379 - 1286822 - | elongation factor P CYA_1273 1288099 - 1287416 - | glycoprotease family protein TERM 957 1288653 - 1288668 + G 77 -2.4 -4.98531 | overlap 1288653 1288655 CTCGGCGCCGGTGGC GGCGGC GACG GCCGTG TTTTTGATTTACCCG TERM 958 1288655 - 1288666 + G 72 -7.2 -4.11472 | overlap 1288653 1288653 CGGCGCCGGTGGCGG CGGC GACG GCCG TGTTTTTGATTTACC TERM 959 1288745 - 1288771 + G 73 -6.7 -4.25283 | gap 1, overlap 1288736 GGACGTTCAACTTCA TGTTGGTGTTCC AAGC GGAGCAC-AACA TTTTGATGCACCCGT psbA-1 1288198 - 1289262 + | photosystem II protein D1 TERM 960 1289298 - 1289319 + TF 88 -7.9 -5.09245 | overlap 1289299 CCAGTCCTTCTTGAA TCCCCTGGC AGAC GCTGGGGGG TTTTTCTGCTTTTCA CYA_1275 1289757 - 1289332 - | hypothetical protein CYA_1276 1289747 - 1289896 + | hypothetical protein CYA_1279 1291310 - 1290363 - | ISSoc4, transposase orfAB CYA_1280 1291935 - 1291474 - | TatC family protein, truncation CYA_1281 1291390 - 1291635 + | hypothetical protein TERM 961 1291628 - 1291618 - GT 72 -2.4 -4.8048 | overlap 1291620 GTTGCAGAGCAAAAA GGGC GTG GCCA GCAATAGCCCCGAGT CYA_1282 1293303 - 1292098 - | polar amino acid ABC transporter permease TERM 962 1292205 - 1292191 - G 85 -3.5 -5.252 | TAGGCCGATAAAAAA CAGCA CTTCC CGCTG GGTGCCTAGCCAGTT TERM 963 1293243 - 1293265 + g 75 -4 -4.77165 | overlap 1293247 AAGCCAGAGGACTTT GTTTCTCCCT GGG GGGGAGTACC TTTTCTTCTACAAGG CYA_1283 1294479 - 1293307 - | polar amino acid ABC transporter permease TERM 964 1294553 - 1294517 - R 74 -11.6 -3.3636 | gap 1, opp_overlap 1294542 1294543, overlap 1294515 1294518 1294543 GCACAGCAGAGAATA GGGGATCCCTGGCCGGT ACTG ACCAACC-GGGATCCCT GTCCCAGGGGGGGCG TERM 965 1294552 - 1294518 - R 80 -15.1 -2.61334 | gap 1, opp_overlap 1294542 1294543, overlap 1294517 1294515 1294543 CACAGCAGAGAATAG GGGATCCCTGGCCGGT ACTG ACCAACC-GGGATCCC TGTCCCAGGGGGGGC CYA_1284 1295625 - 1294588 - | polar amino acid ABC transporter amino acid-binding protein TERM 966 1296169 - 1296192 + G 72 -3.8 -4.59853 | gap 1 TGCGCAACATCGATG CCATTCGCCGC GAG GTGG-GCATGG TTTTTCAACAGTTCA TERM 967 1296355 - 1296345 - g 78 -3.2 -4.99861 | overlap 1296339 GAGCAAGCAGAAAAA TACC CGG GGCA ACTTTCGGGGGGGCA CYA_1285 1295889 - 1296677 + | polar amino acid ABC transporter ATP-binding protein CYA_1286 1297534 - 1296686 - | hypothetical protein CYA_1287 1297563 - 1297778 + | hypothetical protein TERM 968 1297875 - 1297893 + F 71 -4.5 -4.6645 | overlap 1297876 TACAAGCAGTGTCTT TGCTGGC CAAAA GCTAGCG TTTTCTCTCTATATA TERM 969 1298899 - 1298880 - f 71 -4.8 -4.62069 | overlap 1298881 TCCGTAGCCGAAAAA GCGCTGGC CGTA GCCCGCGA GAACGCTGTAGCTGG TERM 970 1299739 - 1299753 + G 73 -12.8 -3.21218 | CATCAACTGCGGCAG GCCGGC TGT GCCGGC TTGGTCGTCCCCGAT trpA-2 1299385 - 1300230 + | tryptophan synthase subunit alpha CYA_1289 1300781 - 1300215 - | ISSoc4, transposase orfB CYA_1291 1301161 - 1300763 - | ISSoc4, transposase orfA CYA_1292 1301241 - 1301537 + | hypothetical protein TERM 971 1301813 - 1301826 + G 84 -2.3 -5.24796 | overlap 1301814 ATGACCCGGAGGAGT TCGAC AGAC GTCGC TTTTTCTTCTGTCAA CYA_1293 1301518 - 1304331 + | putative type III restriction-modification system, res subunit CYA_1294 1304681 - 1305313 + | anaerobic ribonucleotide reductase activating protein CYA_1295 1305617 - 1305333 - | hypothetical protein CYA_1296 1305857 - 1306660 + | stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein CYA_1297 1306701 - 1307639 + | HflC/HflK family protein CYA_1298 1308344 - 1307640 - | ComF family protein rpsL 1308542 - 1308949 + | 30S ribosomal protein S12 rpsG 1308993 - 1309463 + | 30S ribosomal protein S7 TERM 972 1310714 - 1310702 - g 91 -4.8 -5.31855 | overlap 1310703 1310706 CACCAAGAACAAAAA GGAG CGCAT CTCC CGCCTAGTGGTGCTC fusA 1309620 - 1311752 + | elongation factor G tuf 1311775 - 1313004 + | elongation factor Tu TERM 973 1313017 - 1313064 + F 100 -10.8 -5.47218 | gap 3 TAAGCGGCTTTCTCT TGGCAGGGATTGGGC--G-CTGG TCACT CCAGGCAAGCTCGATCCCTGCCA TTTTTTTGAGTACAC rpsJ 1313098 - 1313415 + | 30S ribosomal protein S10 dapB 1313462 - 1314343 + | dihydrodipicolinate reductase CYA_1304 1315251 - 1314340 - | methylenetetrahydrofolate reductase family protein CYA_1306 1316857 - 1315337 - | hypothetical protein CYA_1307 1317757 - 1317026 - | hypothetical protein TERM 974 1317825 - 1317784 - R 77 -12.1 -3.30443 | gap 1 TCAGCAGCAGAGCAA GCCCCAGCCG-CTGCCCCCC TGG GGAGAGCCGTCGGCGGCGGC AGGCTGTCGGTGGGA CYA_1308 1319391 - 1318030 - | oxidoreductase, FAD-dependent TERM 975 1318157 - 1318169 + g 72 -7.7 -4.18018 | CGGATGCCGGCGATC TCCTG GGC CAGGA TTTTGCCTGCCCACA CYA_1309 1319630 - 1319466 - | hypothetical protein tatC 1320673 - 1319891 - | Sec-independent protein translocase TatC TERM 976 1320880 - 1320863 - H 86 -14.1 -3.60792 | CCCCGAACCCCCAAA CCCCCCG TATA CGGGGGG ACAGAGGGGAGCTAG CYA_1311 1321050 - 1321982 + | ISSoc4, transposase orfAB CYA_1312 1322407 - 1322087 - | nucleotidyltransferase domain-containing protein CYA_1313 1322736 - 1322404 - | putative DNA methyltransferase TERM 977 1322847 - 1322825 - R 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG TERM 978 1323745 - 1323765 + r 73 -5.3 -4.57073 | opp_overlap 1323746, overlap 1323746 GCGGGCTTGATGGAA ACGCTCGAA GGG TTCGCGCGC TTTTTCCGGCCAGTC TERM 979 1325615 - 1325625 + r 79 -2.6 -5.28176 | GAATACAACTGGCGA TATT TCA AATA TTTTTTATCCCTGGC TERM 980 1326691 - 1326713 + r 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC CYA_1316 1329119 - 1326864 - | DNA internalization competence protein TERM 981 1328141 - 1328126 - G 71 -4.6 -4.45399 | overlap 1328118 1328127 AGATCAACAGCAAAA CCGCCG CCAC CAGCAG CGTCCCCAGGGGGTT TERM 982 1329403 - 1329372 - H 72 -13 -2.52896 | gap 1, opp_overlap 1329378 CTAGGGTTTAAGCTA CCGAGAGGCGAGGCG GAT CGGCCCGCCTCT-GG TCAAAGGAGTGAGCG CYA_1317 1329550 - 1329765 + | hypothetical protein gspO 1329842 - 1330684 + | prepilin peptidase chlH 1334707 - 1330745 - | magnesium chelatase TERM 983 1332076 - 1332059 - G 78 -6.3 -4.57569 | GCACTCTTCCAAAAA CTCAAAC AAAG GCTTGAG CAGCTCCGCCTCCAC TERM 984 1333804 - 1333766 - G 75 -3.1 -4.82901 | gap 1, overlap 1333767 CTCGTTCCAGAAAAA CTCGTTCACCGGCTTGGA AAAG TCCAAGCCGCCGG-CAAA CACTGGCACCACCCG TERM 985 1335801 - 1335814 + r 72 -3.9 -4.72007 | opp_overlap 1335799 AAAAACAAGAATGCG GTTTT AACC AAAAC TTTGTTTTCATCCCA TERM 986 1336268 - 1336258 - R 81 -3.2 -5.28176 | GGCACCTACAAAAAA GGAT GAG ACCC ATACCGCTACGCCAT pcrA 1338645 - 1336315 - | ATP-dependent DNA helicase PcrA CYA_1322 1338793 - 1339422 + | hypothetical protein TERM 987 1339875 - 1339890 + G 75 -3.2 -4.87665 | TCGACAAGACTATCC CGGCAT GCGA GTGCTG TTTTTCTGCCTGGGC CYA_1323 1339537 - 1340181 + | hypothetical protein dapF 1341045 - 1340188 - | diaminopimelate epimerase TERM 988 1340230 - 1340214 - G 76 -9.3 -4.07568 | TGGTGCCGCTGAAAA CGGGCAG GGC CGGCCCG GTCATCCACACGTGT TERM 989 1341099 - 1341117 + r 73 -5.2 -4.56597 | TCAATCCTCGTGCAT CTCGTAGG GAT CCTGCAAG TTTTTGGAAGGGGGG psbN 1341215 - 1341084 - | photosystem II reaction center protein N psbH 1341406 - 1341609 + | photosystem II reaction center protein H argJ 1342853 - 1341633 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 990 1341826 - 1341784 - G 76 -7.6 -4.25104 | GCCTGGCGATCAAAA GCCAGAGGCATTCCCCCCTG CAG CAGCAGAAAATCCCCCAGGC GAACCTCCAAGCGAC TERM 991 1343528 - 1343554 + G 70 -12.2 -3.17051 | overlap 1343526 TGCGGGCTTCCATTG CCCGCGCCTTGG TAA CCAAGCCGCAGG TGTTGCTGATGGACG CYA_1328 1343098 - 1343904 + | ABC transporter, ATP-binding protein TERM 992 1344251 - 1344265 + G 82 -5.7 -4.91511 | ACGTGATTGCCCCTG GGATC GTCGG GATCC TTTTTCTGGTGGGCT CYA_1329 1344208 - 1345005 + | ABC transporter, permease protein TERM 993 1345096 - 1345074 - T 100 -10.6 -5.06414 | opp_overlap 1345072 TCCCGGCAACAAAAA GGCTCAGG TTGCAGC CCTGAGCC CATCTTGACCTGTTA CYA_1331 1345906 - 1345253 - | Crp/FNR family transcriptional regulator TERM 994 1345613 - 1345594 - G 72 -7.8 -4.18494 | CATCGGCAGCCAAAA GGGCCAGA AAGT TCTGGGCC GACAGAGAGCAGACC CYA_1332 1347674 - 1346103 - | hypothetical protein TERM 995 1346663 - 1346646 - G 76 -8.4 -4.11183 | opp_overlap 1346643 GGCCATCAGAAACAA CTGCCC CTGTTT GGGCAG CGTGTATTCCCAGGC CYA_1333 1348299 - 1347730 - | hypothetical protein CYA_1334 1349336 - 1348335 - | zinc-binding dehydrogenase family oxidoreductase TERM 996 1349601 - 1349618 + G 71 -12.7 -3.07222 | TCGCGCTCCTGGCTC GGCTGGG GTAA CCCAGCC TATTGGGATGCTGCT CYA_1335 1349497 - 1349640 + | hypothetical protein CYA_1336 1349640 - 1350317 + | hypothetical protein apcB-1 1350822 - 1350319 - | allophycocyanin, beta subunit truB 1351947 - 1351048 - | tRNA pseudouridine synthase B TERM 997 1351554 - 1351564 + g 78 -6.8 -4.62069 | CCCCGGCCCGGGCCA GCTC GTA GAGC TTTTTCCCCTGCCGC TERM 998 1351779 - 1351768 - G 75 -3.6 -4.82901 | overlap 1351777 GTCCCCCGACAAAAA CGCC AAAA AGCG CGTCGCCCGCCCCAC TERM 999 1351789 - 1351777 - G 78 -4.7 -4.7657 | overlap 1351768 CAAAAACGCCAAAAA GCGCG TCG CCCGC CCCACGGCAATGGGC CYA_1339 1352022 - 1353053 + | hypothetical protein trpS 1354061 - 1353066 - | tryptophanyl-tRNA synthetase TERM 1000 1353890 - 1353877 - G 72 -4.5 -4.55209 | TAGAGAGCAAACAAA GAACG GGTG CGCTC CCTCAGCAGCTTGGG TERM 1001 1353969 - 1353981 + g 73 -3.3 -4.72272 | CTCGTAGCGCTCCTG CTCGG CCA CCCAG TTTTTAATGGCCCCC CYA_1341 1354154 - 1354489 + | hypothetical protein ycf3 1354567 - 1355088 + | photosystem I assembly protein Ycf3 gatC 1355156 - 1355449 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 1002 1356042 - 1356075 + T 84 -6.7 -4.93316 | gap 1, opp_overlap 1356041 1356042 CCAAAGTTGAACAAT GCCCAGAAGTTCCTAC ACA GCAAGG-CTTCTGGGC TTTTTGATATTCTTG tynA 1358178 - 1356160 - | tyramine oxidase TERM 1003 1357015 - 1356977 - G 81 -7.3 -4.41616 | gap 1, opp_overlap 1357000, overlap 1356979 ATGGTGGTAAAGAAA GAGAGCACCAGCCGCCGC GAGC GCCGCACCTGG-GCTCGC TCCGTGCGCCAGTCG TERM 1004 1358012 - 1358024 + g 72 -7.7 -4.11484 | GAAGCAAGAGGGCGC TCCTG ACG CAGGA TTTTGACCACTTCCC CYA_1347 1358843 - 1358712 - | hypothetical protein TERM 1005 1360073 - 1360095 + G 83 -7.6 -4.62069 | AGAGATCCCAGCCAT CCAGCAGTTG AAG CGGCTGCAGG TTTTTCACGTGCGGG TERM 1006 1360213 - 1360232 + G 77 -13.6 -3.32022 | AAGGAAAGCTTTGGG GCGCCCTA GCCC TAGGGCGC TTGATCTCTGAGCCG CYA_1349 1359018 - 1361663 + | sensory box histidine kinase CYA_1350 1361894 - 1362340 + | hypothetical protein TERM 1007 1362426 - 1362484 + T 85 -16.5 -2.52234 | overlap 1362434 CCCGGCTCCGACCGC CCCCCCTTCCCCCCCAACCCCCCGT ATACGGGGG GCAGGGGGGCGGGGGGATAGGGGGG GTTCCTGCGGTTTCT CYA_1351 1362881 - 1362669 - | hypothetical protein folC 1364600 - 1363311 - | folylpolyglutamate synthase serA 1366251 - 1364668 - | D-3-phosphoglycerate dehydrogenase CYA_1355 1366745 - 1366455 - | hypothetical protein CYA_1356 1367542 - 1367432 - | hypothetical protein CYA_1358 1367795 - 1368193 + | ISSoc4, transposase orfA CYA_1360 1368175 - 1368741 + | ISSoc4, transposase orfB CYA_1359 1369295 - 1368726 - | ISSoc5, transposase, truncation purL 1369435 - 1371735 + | phosphoribosylformylglycinamidine synthase II trxB 1373232 - 1371802 - | thioredoxin-disulfide reductase TERM 1008 1371925 - 1371907 - G 76 -6 -4.56597 | CTTGTTTTTGAAAAA CTGCAC CGTCGGC GTGCAG GTGACCCCCCCTGCC glnA 1373605 - 1375029 + | glutamine synthetase, type I TERM 1009 1375071 - 1375097 + F 100 -14.5 -5.28778 | overlap 1375067 CCAAGGCTTTTGAAC GGGATCCCTTC TTGCT GGAGGGATCCC TTTTTTGTGCCTGCT CYA_1364 1375295 - 1375942 + | hypothetical protein CYA_1365 1376021 - 1376737 + | short chain dehydrogenase/reductase family oxidoreductase TERM 1010 1376984 - 1377027 + G 73 -13.1 -3.18429 | gap 1, overlap 1376985 1376987 1376989 1377016 1377017 TGTTGCTGGGGGTGA TCCTGGT-GGTGCCGCCGCT ATTTG AGCGGCTGCGCCTGCCGGGG TTGGTGGGCCTTTTG TERM 1011 1376985 - 1377026 + G 74 -14.4 -2.50575 | gap 1, overlap 1376984 1376987 1376989 1377016 1377017 GTTGCTGGGGGTGAT CCTGGT-GGTGCCGCCGCT ATTTG AGCGGCTGCGCCTGCCGGG GTTGGTGGGCCTTTT TERM 1012 1377532 - 1377546 + G 77 -2 -5.0538 | overlap 1377533 1377534 CTGTTTGGGGTGGAC TGGCTG GGG CAGCGG TTTTTTCGGGTCACC napA 1376917 - 1378974 + | monovalent cation:proton antiporter-2 (CPA2) family protein CYA_1367 1379558 - 1379067 - | hypothetical protein recR 1380305 - 1379706 - | recombination protein RecR CYA_1369 1380662 - 1380327 - | hypothetical protein CYA_1370 1380830 - 1381726 + | putative sn-glycerol-3-phosphate ABC transporter, permease protein TERM 1013 1382746 - 1382734 - g 75 -3.3 -4.86731 | GCCTCCCAAAGAAAA CGACA TGA TGGCG CTGGCCCTGAACCGC TERM 1014 1382795 - 1382809 + G 74 -5 -4.59773 | overlap 1382770 CGGCAGCAGGTGCCG GAGATC GTG GATTTC TTTTTGCCCATGGAG TERM 1015 1382874 - 1382898 + G 83 -7.8 -4.57341 | gap 1, opp_overlap 1382863 1382864 ACAAGGCCTATCCCG GCCAGGCGCGG CGGG CGGC-CCTGGC TTTTTGGAGCGCCTT ubiD 1381763 - 1383271 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 1016 1383395 - 1383405 + G 71 -8.2 -3.84514 | GCCACGATTGCCCTG GCGG GAT CCGC TTTGCTGATTGCCCT TERM 1017 1384056 - 1384078 + G 78 -6.9 -4.57073 | gap 1, overlap 1384056 CCTTGCTGCTGATTA CC-CGCCGGC TGAA GCCGGAGCGG TTTTTGGGGCAGGTG CYA_1372 1383293 - 1384507 + | arsenite-antimonite (ArsAB) efflux family protein CYA_1373 1384889 - 1384524 - | hypothetical protein CYA_1374 1384977 - 1385594 + | ISSoc2, resolvase TERM 1018 1386694 - 1386717 + GF 70 -11 -3.04461 | AATGCTATCGCTTCA CCGCTGAGCA GTAA TGCTCAGCAG TGTTCAGCGTAAATG CYA_1375 1385449 - 1386729 + | ISSoc2, transposase CYA_1376 1386920 - 1387207 + | hypothetical protein CYA_1377 1387394 - 1387257 - | hypothetical protein TERM 1019 1387302 - 1387329 + gF 75 -3.2 -4.93296 | overlap 1387313 GGGAGTTGGCGAGCG CTCCGGGGTGGC AAGG GATCCCCCTGAG TTTTTATGCTGGTGG CYA_1378 1387369 - 1387680 + | hypothetical protein TERM 1020 1388329 - 1388307 - fH 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG CYA_1381 1388536 - 1389240 + | DnaJ domain-containing protein CYA_1380 1389761 - 1389237 - | hypothetical protein CYA_1382 1390490 - 1389990 - | hypothetical protein CYA_1383 1390939 - 1390490 - | FUR family transcriptional regulator CYA_1384 1391297 - 1390974 - | hypothetical protein clpS 1392830 - 1392525 - | ATP-dependent Clp protease adaptor CYA_1386 1391449 - 1392576 + | hypothetical protein CYA_1387 1394890 - 1393034 - | hypothetical protein CYA_1388 1395348 - 1394953 - | hypothetical protein CYA_1389 1395439 - 1396113 + | riboflavin biosynthesis protein RibD domain-containing protein CYA_1390 1396509 - 1396327 - | hypothetical protein CYA_1391 1396721 - 1396921 + | hypothetical protein TERM 1021 1397101 - 1397089 - f 70 -3.3 -4.7629 | opp_overlap 1397089 CCACCAAGGGAAAAA CCGTG CCA CAGGG CTTTGGGCGAGGAAA TERM 1022 1397298 - 1397344 + G 75 -12.3 -3.5936 | gap 1, overlap 1397288 CTGTTCGCCGCCCAG GCGTTGCTGGGATCCCTCTATC TGCA GATGG-GGGATCCCCGCCAAGC TTTGACCCCTTTGCA TERM 1023 1398582 - 1398595 + G 72 -2.3 -4.73613 | overlap 1398576 1398582 GTGGTGGAGCTGGGA TCCCG TTTC CGGAA TTTTGTTGATACTGC CYA_1393 1397091 - 1398893 + | TPR repeat-containing protein CYA_1392 1399594 - 1398863 - | DNA-binding response regulator recO 1400953 - 1400048 - | DNA repair protein RecO TERM 1024 1400110 - 1400100 - G 74 -2.4 -4.82901 | TCCTCCTCAGAAAAA GCTG CTG CCGC CACTGGGGATCCCTG deoC 1401651 - 1400950 - | deoxyribose-phosphate aldolase TERM 1025 1401976 - 1401958 - g 86 -6.6 -5.02074 | overlap 1401959 CGACTGCTGAAAAAA TCGGCAGA GGC CCTGCCGG AAGTGGCAGAAGACG TERM 1026 1401975 - 1401959 - g 70 -10.1 -3.60762 | overlap 1401958 GACTGCTGAAAAAAT CGGCAGA GGC CCTGCCG GAAGTGGCAGAAGAC CYA_1396 1401835 - 1402206 + | hypothetical protein TERM 1027 1402318 - 1402328 + G 78 -6.8 -4.57073 | GTCGAGCCGCCCAGA GCGT GGA ACGC TTTTTCGACACGCTG CYA_1397 1402203 - 1402730 + | hypothetical protein metG 1404284 - 1402734 - | methionyl-tRNA synthetase TERM 1028 1404928 - 1404944 + GH 72 -3.7 -4.58395 | overlap 1404906 AATCGGGGGGATCTC TCCAG CTACTTT CTGGA TTTTTACCGCCTAGA CYA_1399 1404262 - 1406232 + | hypothetical protein CYA_1400 1406262 - 1406588 + | hypothetical protein CYA_1401 1406653 - 1407894 + | hypothetical protein CYA_1402 1408382 - 1407996 - | hypothetical protein TERM 1029 1408517 - 1408535 + G 75 -3 -4.87665 | AGCAACTTCGAGGCA CCCCCC ATGAGCC GGCGGG TTTTTCTGAATGCCC petC 1408487 - 1409005 + | cytochrome b6-f complex iron-sulfur subunit TERM 1030 1409289 - 1409311 + F 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC petA 1409483 - 1410466 + | apocytochrome f TERM 1031 1410501 - 1410522 + T 100 -9.4 -5.41143 | CGAGAGTCTTCCCAG CACCTCGG AGCCAG CCGGGGTG TTTTTTTAGGGAATC CYA_1405 1411340 - 1410528 - | PhzF family phenazine biosynthesis protein TERM 1032 1410824 - 1410812 - G 76 -9.1 -3.98826 | overlap 1410805 CGATCAACCCAGAAA CAGGC AGT GCCTG AACCCGCTCCCAATC TERM 1033 1411209 - 1411198 - G 82 -3.6 -5.14563 | TGGGGCAGCAAAAAA GCCG TTTC CGAC AGATTGTTCTCCGCC TERM 1034 1411722 - 1411711 - g 100 -7.2 -5.27938 | ACCGCCAAAGAAAAA CCCC AAGT GGGG GAGGTGGTCGCAGTT groES 1411585 - 1411896 + | co-chaperonin GroES TERM 1035 1413080 - 1413049 - g 91 -2.8 -5.40464 | overlap 1413051 TACGACAAAGAAAAA CTGCAAGAGCGCCT GGCC AAGCTCTCCGGCGG TGTGGCGGTGATCAA TERM 1036 1413523 - 1413480 - g 70 -7.4 -4.07568 | gap 1 CTCTGCCCTGCAAAA CGCT-GCCTCGATTGCCAGCA TGG TGCTCACCACCGAGGCCATCG TGGTAGACAAGCCGG groEL 1411963 - 1413597 + | chaperonin GroEL TERM 1037 1413672 - 1413691 + F 95 -13.6 -4.45068 | GAGCAGCCATCTTCC GGGATCCC GGCT GGGATCCC TTTATTCTTGGGCAT CYA_1408 1413771 - 1414598 + | hypothetical protein CYA_1409 1414754 - 1415917 + | inositol-5-monophosphate dehydrogenase CYA_1411 1416275 - 1417909 + | S-layer domain-containing protein TERM 1038 1417948 - 1417969 + F 78 -13.1 -3.37344 | opp_overlap 1417938 1417952 CCAAATTGCCAGGCA GAGATCCAC TACG GTGGATCTC TTCATTGAATAAGAA CYA_1412 1418354 - 1419934 + | putative S-layer protein TERM 1039 1419971 - 1419992 + T 100 -14.5 -5.24531 | TTCATAGCTGGTTAG GGGATCCAC TGCA GTGGATCCC TTTTTTATGGCAAGT CYA_1413 1420917 - 1420078 - | hypothetical protein CYA_1414 1422682 - 1420985 - | SulP family sulfate permease gyrA 1422999 - 1425539 + | DNA gyrase subunit A CYA_1416 1425730 - 1426125 + | hypothetical protein CYA_1417 1426263 - 1427396 + | glycerate kinase psbW 1427568 - 1427882 + | photosystem II reaction center protein Psb28 gatA 1429417 - 1427888 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1040 1428385 - 1428396 + g 72 -7.2 -4.14739 | opp_overlap 1428384 CCTCCGGCCCAAAGC CGCG GGCG CGCG TTTTGCCGTACATAG TERM 1041 1429648 - 1429617 - R 72 -2.2 -5.00616 | gap 1, overlap 1429618 1429619 CGCCGTTCCAAAAAA TCGCGGC-GCAGATC CCG AATCTCCTGCCGCAT CTCCCGCATCTCTTG CYA_1420 1429915 - 1429598 - | hypothetical protein CYA_1421 1430361 - 1430023 - | hypothetical protein TERM 1042 1430205 - 1430233 + g 71 -5.9 -4.25104 | GCATCGCCTGTCCCT CCCGCAGCTCTTG GAT CAAAACCTGCTGG TTTTGCTGGACAAGA CYA_1423 1431175 - 1430501 - | hypothetical protein TERM 1043 1431291 - 1431261 - R 76 -3.9 -5.00616 | opp_overlap 1431261, overlap 1431263 CGCCGTTCCAAAAAA TCGCGGCGCAGAT CCCTC ATCTCCGCTGCCA TCTCATCAGTGCGGC CYA_1424 1431622 - 1431242 - | hypothetical protein TERM 1044 1431688 - 1431653 - R 100 -8.2 -5.69473 | gap 1, overlap 1431642 1431654 CAGAGGATAAAAAAA TCCTACTCCCCTCTCCC TCA GGGAGAGGGGC-TGGGG GTGGTCGCGTTAGCG TERM 1045 1431687 - 1431654 - R 83 -11.7 -4.00057 | gap 1, overlap 1431642 1431653 AGAGGATAAAAAAAT CCTACTCCCCTCTCCC TCA GGGAGAGGGGC-TGGG GGTGGTCGCGTTAGC CYA_1425 1431787 - 1431698 - | hypothetical protein TERM 1046 1431822 - 1431800 - R 100 -19.2 -5.48213 | CACCCAAAACAAAAA CCCCTCTCCC CAT GGGAGAGGGG CCAGGGGTGAGGGAT CYA_1426 1432150 - 1431851 - | ferredoxin, 2Fe-2S TERM 1047 1432474 - 1432460 - g 100 -8.6 -5.76949 | CACCTGGAAAAAAAA TGGCAA GAC TTGCCA AGTTGGGCAGATCTG CYA_1427 1432352 - 1432498 + | hypothetical protein TERM 1048 1432609 - 1432630 + F 81 -2.9 -5.26875 | opp_overlap 1432612, overlap 1432612 TCGGGTAAGGTAAGG GAAGTGTTC AGCC GAACCCTAC TTTTTTGGTTAAGAG CYA_1428 1432665 - 1434956 + | putative lipoprotein TERM 1049 1434978 - 1435027 + F 86 -9.3 -4.71061 | gap 1 TCTAGTCTGGCAACG GCGGCCTGCTGCTATTGGGCTGAC GGA GTT-GCTTGGTGGTGGCAGGTCGC TTTTTCCATCTCGCT CYA_1430 1435208 - 1437325 + | putative lipoprotein CYA_1429 1437467 - 1437306 - | hypothetical protein TERM 1050 1437386 - 1437406 + g 84 -14 -3.73995 | overlap 1437393 GCTGGAAGCTGTTTC CCCCCCTG CCCCC CAGGGGGG CTTTTTTGTAGGCCC TERM 1051 1437393 - 1437407 + g 100 -12.8 -5.24129 | overlap 1437386 GCTGTTTCCCCCCCT GCCCCC CAG GGGGGC TTTTTTGTAGGCCCC CYA_1431 1437521 - 1438027 + | pentapeptide repeat-containing protein CYA_1432 1438097 - 1438597 + | hypothetical protein CYA_1433 1438736 - 1439401 + | putative lipoprotein CYA_1434 1439403 - 1439495 + | hypothetical protein CYA_1435 1439922 - 1441664 + | putative lipoprotein TERM 1052 1441689 - 1441704 + T 100 -11.8 -5.7946 | GCCCTTTCTCTGGCA GGCCCC TGGC GGGGCC TTTTTTTGTTGCAGC CYA_1436 1443266 - 1441806 - | M8 family peptidase TERM 1053 1444598 - 1444584 - g 71 -5.7 -4.36914 | CGCTGGTTCACAAAA CCATG GAGAT CATGG ACTGGACCCAGGAAG CYA_1437 1443425 - 1444693 + | hypothetical protein TERM 1054 1444720 - 1444746 + T 80 -5 -4.87291 | opp_overlap 1444709 1444721, overlap 1444721 GCCAGGACTTACGAA AGCCCCCCTG ATTCATA CATGGGGGCC TTTTTGGTTGACATA TERM 1055 1444951 - 1444929 - T 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG CYA_1438 1446401 - 1445169 - | ISSoc2, transposase TERM 1056 1445279 - 1445257 - GT 72 -9.8 -3.55444 | GCGGTATCCCGCAAA GCCCTGAGCA TGA CACCCAGGGC GCCTTGCCAGTCCCG CYA_1439 1446849 - 1446256 - | ISSoc2, resolvase CYA_1440 1447375 - 1446917 - | ISSoc14, transposase, truncation TERM 1057 1447432 - 1447414 - R 88 -10.2 -4.40804 | opp_overlap 1447413 1447414 1447429 1447431, overlap 1447415 TAGCATCTTACAAAA GCCGCCCT AGA AGGGCGGG GCTTGTAACCCAGTT TERM 1058 1447431 - 1447415 - R 81 -13.7 -3.24 | opp_overlap 1447413 1447414 1447429, overlap 1447414 AGCATCTTACAAAAG CCGCCCT AGA AGGGCGG GGCTTGTAACCCAGT TERM 1059 1447429 - 1447445 + r 86 -2.1 -5.55664 | opp_overlap 1447415 1447414, overlap 1447413 1447414 1447431 GCCGCCCTAGAAGGG CGGGGCT TGT AACCCAG TTTTTTTGGTCATCG CYA_1441 1448585 - 1447464 - | carbohydrate ABC transporter ATP-binding protein TERM 1060 1448771 - 1448739 - R 89 -6.4 -5.2696 | gap 2, overlap 1448747 CGAAAAGCCAAAAAA CCCAAAAAGGTAGGCC ACG AGCCTACC-T-CTGGG ATCTGGATCTTGTTA TERM 1061 1448765 - 1448747 - R 100 -11 -4.95854 | overlap 1448739 CAAAAAACCCAAAAA GGTAGGCC ACG AGCCTACC TCTGGGATCTGGATC CYA_1442 1449255 - 1448815 - | small heat shock protein (HSP20) family protein CYA_1443 1449745 - 1449434 - | hypothetical protein acnB 1452454 - 1449821 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 1062 1450573 - 1450595 + g 100 -12 -4.56597 | GCAGGGTTCTCGCAT CCTGATAGCC GCG GGCGATCAGG TTTTTCAGCAGCACC TERM 1063 1450756 - 1450766 + g 77 -2.4 -5.09204 | opp_overlap 1450750 TCTCCATAATTCGCC CGGC AAA GACG TTTTTCTTGCCCTGT prfA 1453614 - 1452529 - | peptide chain release factor 1 TERM 1064 1453229 - 1453253 + g 73 -11.3 -3.5627 | opp_overlap 1453208 GCCCACAGGGCCGCC TCCTCGCCGCC GGT GCCGGCGCGGA TTTCCAACATAATGT rpmE 1453906 - 1453685 - | 50S ribosomal protein L31 TERM 1065 1453871 - 1453894 + g 78 -3.2 -5.03314 | gap 1 GATGACTTTGGCTTC GGGATACCACT GGG GGTG-TATTCC TTTTTTGGGCATGGC rpsI 1454397 - 1453984 - | 30S ribosomal protein S9 rplM 1454849 - 1454394 - | 50S ribosomal protein L13 truA 1455762 - 1454899 - | tRNA pseudouridine synthase A rplQ 1456118 - 1455768 - | 50S ribosomal protein L17 rpoA 1457186 - 1456191 - | DNA-directed RNA polymerase subunit alpha TERM 1066 1456256 - 1456278 + g 72 -2.6 -4.8048 | AAGCTTGCACCACCT CTTCCGCGGA TTT TTGGCCGAAG TTTTTGATCTCCAGC rpsK 1457695 - 1457309 - | 30S ribosomal protein S11 TERM 1067 1457573 - 1457612 + g 73 -10.8 -3.63515 | gap 1, opp_overlap 1457573 TGCGGAGGCCCAAGA CACCA-CGTCGCCATTGGG ATC CGTGATGGTGACGATGGTG TTGTTGAAGGTGGAC rpsM 1458167 - 1457784 - | 30S ribosomal protein S13 TERM 1068 1458283 - 1458302 + r 70 -10 -3.45768 | opp_overlap 1458276 TGAAGAACCCAGAGT CTCCTCTC GCAA GAGAGGGG TTGCTTGATCTTCCG rpmJ 1458497 - 1458381 - | ribosomal protein L36 CYA_1455 1458692 - 1460623 + | hypothetical protein CYA_1456 1460682 - 1461719 + | hypothetical protein TERM 1069 1462723 - 1462733 + G 78 -6.8 -4.64383 | opp_overlap 1462706 GCCACCTGCGCTGGT GGCA CTA TGCC TTTTGCTTTGTCCTT TERM 1070 1463175 - 1463195 + G 71 -6.1 -4.2772 | overlap 1463162 1463176 TGGCGGGGGATCCGC CGCTTCCAT GGC GTGGAAGCC TTTATCTTAATTGGC CYA_1457 1461999 - 1463558 + | dolichyl-phosphate-mannose-protein mannosyltransferase CYA_1458 1463667 - 1464716 + | oxidoreductase, NAD-binding TERM 1071 1464720 - 1464751 + F 74 -12.2 -3.21276 | overlap 1464718 1464722 TTTTTGTCTTAGCTT TGCCGCCGGCCTCC AGGC GGGGGCAGGTGGTA TCTTCTGCCAGCCGG TERM 1072 1464722 - 1464749 + F 75 -12.6 -3.17146 | overlap 1464720 1464718 TTTGTCTTAGCTTTG CCGCCGGCCTCC AGGC GGGGGCAGGTGG TATCTTCTGCCAGCC TERM 1073 1464865 - 1464884 + G 81 -4.2 -5.055 | gap 1, overlap 1464866 GCAATCGGCGGCCTA GCGG-CAGG GAT CCTGGCCGG TTTTTTGGGCATTGG TERM 1074 1464948 - 1464972 + G 71 -5.5 -4.33151 | overlap 1464950 CTTGGGGATCCCGCC GCTGCAGGCGG TGG CCACCAGCAAC TTTTCCATTCTCCTC CYA_1459 1464769 - 1465722 + | hypothetical protein CYA_1460 1466739 - 1465840 - | prephenate dehydratase CYA_1461 1467078 - 1466743 - | competence protein alr 1468837 - 1467548 - | alanine racemase sppA-2 1469918 - 1468878 - | signal peptide peptidase SppA, 36K type TERM 1075 1469537 - 1469517 - G 70 -12.5 -2.8805 | opp_overlap 1469493 1469490, overlap 1469520 AGCACTGGCTACATA GTAGCCGCC GCT GGCGGCAAC GTCTTCCATGACGGC CYA_1465 1470893 - 1472410 + | hypothetical protein TERM 1076 1473962 - 1473975 + G 76 -9.5 -3.9712 | GTACCTTTGTCTTGT GCCGC AGTT GCGGC TTTGTCCTCACCTGC TERM 1077 1474527 - 1474567 + G 84 -8.2 -4.42238 | gap 1, opp_overlap 1474539, overlap 1474528 CCAGGCCGAGCTGCG CCAACGCCAAG-AGGGGGG CTAC CCTCCCTACCGGGCGTTGA TTTTAATTCGCCTGA TERM 1078 1474528 - 1474566 + G 70 -11.7 -3.2486 | gap 1, opp_overlap 1474539, overlap 1474527 CAGGCCGAGCTGCGC CAACGCCAAG-AGGGGGG CTAC CCTCCCTACCGGGCGTTG ATTTTAATTCGCCTG priA 1472452 - 1474845 + | primosome assembly protein PriA CYA_1467 1475005 - 1476111 + | isopropylmalate/isohomocitrate dehydrogenase family protein CYA_1468 1477069 - 1476143 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein CYA_1469 1477084 - 1477329 + | hypothetical protein CYA_1470 1477378 - 1478613 + | hypothetical protein TERM 1079 1478654 - 1478631 - T 70 -11 -3.04461 | CATTTACGCTGAACA CTGCTGAGCA TTAC TGCTCAGCGG TGAAGCGATAGCATT CYA_1471 1479899 - 1478619 - | ISSoc2, transposase CYA_1472 1480371 - 1479754 - | ISSoc2, resolvase TERM 1080 1480640 - 1480660 + H 77 -11.1 -3.6052 | opp_overlap 1480637, overlap 1480647 CACCCCTAGACAGCC CCTTGAGGC AGA GCCCCAAGG TTCTACTTACTTTTC CYA_1473 1481805 - 1482455 + | putative cob(I)alamin adenosyltransferase dcd 1482540 - 1483133 + | deoxycytidine triphosphate deaminase TERM 1081 1483796 - 1483821 + G 70 -12.5 -2.87931 | gap 1 AGCAGATCCTGGGGC GGGTGGG-GCGG ATC CCGCTCCCTCCC TATCTGAAAGCTGCC queA 1483225 - 1484415 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase CYA_1475 1485188 - 1484412 - | hydrolase, haloacid dehalogenase family protein TERM 1082 1484816 - 1484797 - G 78 -3.4 -5.01732 | AAGCGCTCCAAAAAA GCCTCCAC CTCA GCAGCGGC GTGGCCGCTCACTAG CYA_1477 1486212 - 1485217 - | aldo/keto reductase family oxidoreductase TERM 1083 1486054 - 1486032 - G 76 -12.6 -3.53563 | AGAGCTCTTCCGAAA GGCCGCGGCC ATA GGCCGGAGCC GTGTCAAAGAGCGTA TERM 1084 1486469 - 1486482 + G 72 -3.7 -4.57073 | overlap 1486469 TTCTGCCCAGGCGCA GGTGG TCAC CCCCC TTTTTCCAGAACCTG CYA_1478 1486245 - 1486910 + | hypothetical protein pyrG 1486962 - 1488596 + | CTP synthetase CYA_1480 1488780 - 1488628 - | hypothetical protein CYA_1481 1488848 - 1489324 + | hypothetical protein CYA_1482 1489545 - 1490024 + | peptidylprolyl cis-trans isomerase, cyclophilin-type TERM 1085 1490780 - 1490791 + G 74 -5.8 -4.44608 | overlap 1490776 1490773 1490777 AGGGTGCCGGACCTG GAGC AGGT GCTC TTGTTTTTGGCTGCC gvpK 1490111 - 1491406 + | HAD hydrolase-like protein/gas vesicle protein K TERM 1086 1492684 - 1492699 + G 78 -6.8 -4.57073 | gap 1, overlap 1492690 CTCCCTGGGCGGGTT GCC-GCC GCT GGCCGGC TTTTTCGGCAAGCTC CYA_1484 1491527 - 1493104 + | NAD(P)H-quinone oxidoreductase subunit 2 ycf4 1493840 - 1493271 - | photosystem I assembly protein Ycf4 CYA_1486 1495182 - 1494061 - | S-layer domain-containing protein TERM 1087 1495107 - 1495079 - G 91 -11.8 -4.30416 | gap 2, overlap 1495082 AGCAGCAAGGCAAAA CCAGC-GGC-CCTG AGC CAGGTGCCGGCTGG AGGCAGCGACCGCCT CYA_1487 1495484 - 1495170 - | hypothetical protein CYA_1488 1496153 - 1495536 - | hypothetical protein TERM 1088 1496210 - 1496224 + r 75 -11.4 -3.48276 | CCCAGCTCACCTCGT CGCCGA GGT TCGGCG TTGTCTCAAACAAAA CYA_1489 1496693 - 1496190 - | hypothetical protein CYA_1490 1497415 - 1496753 - | RNA polymerase sigma factor RpoE TERM 1089 1496921 - 1496911 - G 78 -6.8 -4.56597 | TTGTCTGGCGAAAAA CCTG AGG CAGG TCGCGGACGGCTTGG CYA_1491 1497684 - 1498391 + | cyclic nucleotide-binding protein TERM 1090 1498764 - 1498776 + G 80 -4.8 -4.82901 | AGTTTTGGCCCATCC GCGA CCACC TCGC TTTTTATGCGGGCCG CYA_1492 1498421 - 1498915 + | hypothetical protein CYA_1493 1499032 - 1501002 + | DnaJ domain-containing protein TERM 1091 1501883 - 1501866 - gT 71 -7.7 -4.07568 | overlap 1501867 GCGCTTTTTTGAAAA CCTGCTC CTGC GAGCAGA GCAGACAGCCATGGC CYA_1494 1504893 - 1501966 - | sensor histidine kinase CYA_1495 1501066 - 1502028 + | putative transporter TERM 1092 1502412 - 1502451 + gT 91 -9.3 -4.65895 | gap 2, overlap 1502416 CATCGCCCTGGACGA CG-AGGCTGAGGTCGC-CG TGGG CGCGCGGCCACAGCTTGCG TTTTTGGGTCAGGCC TERM 1093 1502416 - 1502446 + gT 75 -11.1 -3.46102 | gap 1, overlap 1502412 GCCCTGGACGACGAG GCTGAGGTCGC-CG TGGG CGCGCGGCCACAGC TTGCGTTTTTGGGTC CYA_1496 1505595 - 1505050 - | NADPH-dependent FMN reductase CYA_1497 1508000 - 1505724 - | hypothetical protein TERM 1094 1506670 - 1506626 - G 84 -15.8 -3.32844 | gap 2, overlap 1506642 CGTGGTATTCCACAA TCC-GGTGGAGGCCAAAG-GCG CTG CGCTCCTCGGCCACCACCTGGA GCCCCGGCGGCAGCC TERM 1095 1507350 - 1507338 - G 76 -6.2 -4.56597 | overlap 1507322 GCCCGCCGGCAAAAA GGCC CAGCC GGCC CAGCGCCAACGCTCC TERM 1096 1507541 - 1507521 - G 77 -12.5 -3.64198 | overlap 1507538 CCCCGACAGAGACAA CCGCGGCTC CAA GAGCAGCGG ATAGCCCAGCAGCCC TERM 1097 1507912 - 1507892 - G 70 -10.3 -3.61178 | overlap 1507895 GGCAGGTATTCCAAA CCAGGGGGG ATC CCCCCCAGA GCGGCAGCAGCAATT TERM 1098 1507909 - 1507895 - G 70 -12.8 -2.92792 | overlap 1507892 AGGTATTCCAAACCA GGGGGG ATC CCCCCC AGAGCGGCAGCAGCA TERM 1099 1507970 - 1507955 - G 77 -2.5 -5.00884 | overlap 1507942 1507964 ACTGCCCCCAAAAAA GGCAA AAGGCG CTGCC GAACAACGTGAGGCC CYA_1498 1508881 - 1508120 - | hypothetical protein TERM 1100 1508218 - 1508231 + g 75 -3.7 -4.68724 | CCTGGCCCTGCTGCA CGCGG CCAT CCGGG TTTTGTGTTAGCTCC CYA_1499 1509067 - 1508954 - | hypothetical protein TERM 1101 1510103 - 1510084 - g 75 -2.8 -4.83759 | gap 1, overlap 1510085 AAGGAAATGCAAAAA GTGT-GCGC CGA GCGCTACAT CGCCTTCGGCTGTGC fba 1509142 - 1510221 + | fructose-1,6-bisphosphate aldolase TERM 1102 1510276 - 1510296 + T 95 -12.6 -4.54727 | AATATCGACAGGTGA GGGGATCC TTTGT GGATCCCC TTTTGCTTTGGAGGA CYA_1501 1510564 - 1510331 - | hypothetical protein CYA_1502 1510952 - 1510605 - | hypothetical protein CYA_1503 1511633 - 1511145 - | NifU family SUF system FeS assembly protein TERM 1103 1511886 - 1511896 + r 71 -4.6 -4.65895 | TAGGTCTTGGGCGGG GGCT GGC GGCC TTTTTCGCTGACCAG cobM 1512763 - 1511999 - | precorrin-4 C11-methyltransferase TERM 1104 1513122 - 1513165 + r 71 -8.8 -3.78022 | opp_overlap 1513130 AGCCAAGCCTTGGCC GGGATGAACGCCGCTTGGTT GCCC ACCCAAGTGGCCTTGACCCC TTTCATGAGTCTGGG TERM 1105 1513879 - 1513843 - R 75 -13 -3.01712 | gap 1 CCTCGGCTTGGAACA GGCGGCAACCGTCCTGG TGGG CCAGGCCG-TTGGCGCC GGGCAGCCGGCTTGG ispD 1515081 - 1514374 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1106 1515172 - 1515139 - R 78 -14.7 -2.66106 | opp_overlap 1515138 1515139 1515144, overlap 1515144 GAGGTCAACAAGCCA CAAAAGAGAGGGCCA GACC TGACCCCCTCTCTTG ATTTTCAGTCCTGTG TERM 1107 1515167 - 1515144 - R 91 -11 -4.50943 | opp_overlap 1515139 1515138 1515144, overlap 1515139 CAACAAGCCACAAAA GAGAGGGCCA GACC TGACCCCCTC TCTTGATTTTCAGTC amt 1516637 - 1515231 - | ammonium transporter glnB 1517127 - 1516789 - | nitrogen regulatory protein P-II CYA_1509 1518694 - 1517279 - | putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein CYA_1510 1519064 - 1518855 - | hypothetical protein TERM 1108 1519315 - 1519302 - H 77 -3.1 -5.13521 | gap 1, overlap 1519303 AAACTACGGAAAAAA GC-TGG AGA CCAAGC TGAGGGGACTTGGGG TERM 1109 1520192 - 1520214 + G 72 -7.7 -4.11394 | CCTAAAAAGCTCGGC GCTGCTGCA GGTGA TGCAGCAAC TTTTACAACTGGAGT holA 1519335 - 1520312 + | DNA polymerase III subunit delta ctaE 1521010 - 1520399 - | cytochrome c oxidase, subunit III TERM 1110 1520559 - 1520543 - G 72 -4.3 -4.65933 | overlap 1520545 CACCGCCAAAATAAA CAGCAGC CCC GCCGCCA CATGTAGCCCGTGAA ctaD 1522836 - 1521127 - | cytochrome c oxidase, subunit I TERM 1111 1521419 - 1521407 - G 81 -6.9 -4.77567 | ATGGCTAGAACAAAA GCCCC CAC GGAGC TAATCCAGTTGAGGT TERM 1112 1522803 - 1522756 - G 86 -4.6 -5.1925 | gap 1, opp_overlap 1522771, overlap 1522757 1522758 GGAGAAGGTAAAAAA GC-GCCACCAAGGCTCGGCGGGA GGA TCCAGGCTGGCTTTGGGGGCAGC GGCAAGGGTGGGATT ctaC 1523861 - 1522833 - | cytochrome c oxidase, subunit II TERM 1113 1523718 - 1523697 - G 73 -2.9 -4.77036 | opp_overlap 1523708 CTCCACCACCAAAAA GATCCCCGT GGCG ATGGTGATC GTGCTGTTGAAGAGG TERM 1114 1523927 - 1523911 - H 87 -9.5 -4.52589 | overlap 1523926 CCGCCCTAGACAAAA TCTGTTC TGC GAACAGA GCCGAAGCGGGCCAC TERM 1115 1524653 - 1524685 + G 78 -4.8 -4.71186 | gap 2 GAAGCGCAAGGCCTT GCCC-GCTT-GGCTGC CCT GGGGCCTGAGCTGGGC TTTTGTCTTGGTCGT CYA_1515 1524408 - 1525343 + | cytochrome oxidase assembly protein cyoE 1525396 - 1526391 + | protoheme IX farnesyltransferase TERM 1116 1526413 - 1526434 + F 77 -11.5 -3.62775 | AACCAATTGACATCC TCCCCGGCC TGAA GGCGGGGGA TTCTTACACGGTCGT CYA_1518 1527847 - 1529391 + | outer membrane efflux family protein rpsD 1530245 - 1529634 - | 30S ribosomal protein S4 gmd 1531546 - 1530410 - | GDP-mannose 4,6-dehydratase TERM 1117 1531007 - 1530994 - G 72 -3.8 -4.63218 | CGTGGTTGAACAAAA TGCC GTTGCA GGCA AAGAGGTTGTAGGCT CYA_1521 1533054 - 1531693 - | nicotinate phosphoribosyltransferase CYA_1522 1533207 - 1534283 + | hypothetical protein hisZ 1534364 - 1535596 + | ATP phosphoribosyltransferase regulatory subunit gyrB 1537475 - 1535547 - | DNA gyrase subunit B TERM 1118 1536045 - 1536072 + g 74 -2.7 -4.91459 | gap 1, overlap 1536024 1536058 1536060 GACCCCCAGGCCCAG CGCTGTGA-TCA TGGCC TGAATCTCGGCG TTTTTGTAGATCTTG rimM 1538217 - 1537657 - | 16S rRNA-processing protein TERM 1119 1537706 - 1537728 + g 76 -5.5 -4.59773 | gap 1, opp_overlap 1537687 TCCACCAATCCCGGT GGCG-GCTGC ACCT GCAGCTCACC TTTTTCCAAATCCAC CYA_1526 1539197 - 1538229 - | HflC/HflK family protein CYA_1527 1539214 - 1539321 + | hypothetical protein CYA_1528 1539402 - 1540394 + | pyridine nucleotide-disulfide oxidoreductase TERM 1120 1541259 - 1541273 + G 83 -9.2 -4.2803 | overlap 1541260 TCCCCAACTGGTGGT TCGCCC ACC GGGCGG TTTTCGCTTAGACTC CYA_1529 1540474 - 1541559 + | polysaccharide deacetylase family protein CYA_1530 1541632 - 1542297 + | hypothetical protein CYA_1531 1543451 - 1542429 - | M23B family peptidase TERM 1121 1542858 - 1542816 - G 90 -8.2 -4.85599 | GGCAGGGCAGAAAAA CGCTGGCTCCGGACGCGCTA CGG TAACCCGTCCTGGGGCGGCG GCCAGGATGGGGGTG TERM 1122 1543079 - 1543062 - G 74 -4.7 -4.56597 | overlap 1543064 GGGCTTGTGCAAAAA CGGCCAC TGGG GCGGCGG CGGATCCCCATTAGA CYA_1532 1543567 - 1544442 + | hypothetical protein TERM 1123 1544442 - 1544464 + T 84 -3.2 -5.42259 | opp_overlap 1544442, overlap 1544443 GGCGGGGGCGAAGTA GGTCGCCTAG GGT CTCGGCGCCG TTTTTTTCGGGCTGC lspA 1544918 - 1544448 - | lipoprotein signal peptidase TERM 1124 1545121 - 1545097 - R 100 -11.4 -5.26247 | overlap 1545098 GCAAAACAAAGAAAA GCGTCCGGCT AGCTG AGCCGGACGG GGATCCTACAGTCTA TERM 1125 1545120 - 1545098 - R 95 -14.9 -3.73308 | overlap 1545097 CAAAACAAAGAAAAG CGTCCGGCT AGCTG AGCCGGACG GGGATCCTACAGTCT TERM 1126 1545164 - 1545150 - R 70 -5.6 -4.38171 | TAGAGGAGAGGAAAA GAGCAG CTA CCGCCC CCGCTGCTCCAGGGA CYA_1534 1545380 - 1545156 - | hypothetical protein cysC 1545988 - 1545458 - | adenylylsulfate kinase argD 1546079 - 1547335 + | acetylornithine aminotransferase CYA_1536 1547745 - 1547332 - | hypothetical protein TERM 1127 1547369 - 1547359 - G 78 -6.8 -4.57073 | GACCTGCTGCAAAAA GGCT TGC AGCC GCTGGCGGGCCTCCT TERM 1128 1547461 - 1547449 - G 76 -10.5 -3.86346 | GTAGGCCGGGACAAA GCCGG CAG CCGGC CAGAGCAAATCCGAG TERM 1129 1548112 - 1548089 - g 72 -3.8 -4.65895 | gap 1, opp_overlap 1548090 1548093, overlap 1548090 1548094 CGGGCCATGGAAAAA CTAGAGCCGGA GAT CCCGGC-CTAT GTCCTGCCCACCCAG CYA_1538 1547900 - 1548724 + | creatininase CYA_1539 1548851 - 1549513 + | hypothetical protein CYA_1540 1549537 - 1550202 + | hypothetical protein CYA_1541 1550846 - 1550208 - | Crp/FNR family transcriptional regulator TERM 1130 1550667 - 1550640 - G 74 -9.9 -3.73224 | GGAGGGGCCAGCAAA TCCCAACAGCG CCTCGC CGCCATTGGGA TAGAGGGTAGTCAAT atpC 1551104 - 1551511 + | ATP synthase F1, epsilon subunit TERM 1131 1551510 - 1551522 + F 71 -4.7 -4.63218 | opp_overlap 1551507 TGGGCCACAAAAGCT GAGGG ATC CCCGC TTTTCTTGGCAGGGG CYA_1544 1551633 - 1552100 + | MerR family transcriptional regulator glmS 1553908 - 1552061 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 1132 1552190 - 1552216 + g 74 -5 -4.57073 | opp_overlap 1552180 CAGCAGAGGTGTGGT GCTGGGCACCTC GAT GACGTGGTCGGC TTTTTCCCGGACCTG CYA_1545 1555208 - 1553982 - | mce related protein CYA_1547 1557062 - 1556256 - | TerC family membrane protein CYA_1548 1558139 - 1557330 - | circadian phase modifier CpmA-like protein CYA_1549 1559056 - 1558160 - | universal stress protein dnaB 1560959 - 1559184 - | replicative DNA helicase TERM 1133 1559252 - 1559240 - G 80 -4.7 -4.86731 | opp_overlap 1559239 1559241 1559242, overlap 1559235 1559241 1559242 GGCTTTCAAACAAAA GGCGC ACC GTGCC CGTGGGGCCGTTGCG TERM 1134 1560130 - 1560105 - G 90 -8.3 -4.83615 | gap 1, overlap 1560107 CAGTTGCGACAAAAA GCCAATCGCCTG CCC CAGGCG-TTGCC ACTCATTCTCGCTGA rplI 1561531 - 1561070 - | ribosomal protein L9 pstS-2 1561867 - 1562946 + | phosphate ABC transporter, phosphate-binding protein pstC-1 1562971 - 1563939 + | phosphate ABC transporter, permease protein PstC pstA-1 1563946 - 1564845 + | phosphate ABC transporter, permease protein PtsA pstB-1 1564882 - 1565709 + | phosphate ABC transporter, ATP-binding protein CYA_1556 1565775 - 1566602 + | hemolysin A CYA_1557 1566646 - 1567080 + | TPR repeat-containing protein CYA_1558 1567349 - 1567552 + | hypothetical protein sat 1569032 - 1567851 - | sulfate adenylyltransferase CYA_1560 1569517 - 1569146 - | hypothetical protein CYA_1561 1570428 - 1569646 - | putative chromosome partitioning protein ParA TERM 1135 1571705 - 1571691 - g 100 -12.8 -4.83615 | CATCGTGGACAAAAA CGCCCG CAT CGGGCG CAATGTCCGCATCCT glgC 1570546 - 1571832 + | glucose-1-phosphate adenylyltransferase CYA_1563 1571985 - 1573757 + | hypothetical protein CYA_1564 1573800 - 1574174 + | hypothetical protein CYA_1565 1574337 - 1574666 + | hypothetical protein TERM 1136 1574943 - 1574962 + G 71 -5.6 -4.38712 | overlap 1574946 GGCGTGGATCTAAGG CGGGGCCA AGTG TGGCCGTG TTTTGTGGACATCCA CYA_1567 1574742 - 1576091 + | cytosine deaminase CYA_1566 1577257 - 1576088 - | hypothetical protein CYA_1568 1577385 - 1577690 + | hypothetical protein TERM 1137 1578631 - 1578590 - g 73 -3.4 -4.71482 | overlap 1578581 1578592 ACCAAAGCGGAAAAA CCCCCCGCCGGCCTGGAG TACGTG CGCCTGGCCGCTGAGAAG GCCCACTTGCCCTGG thiE 1577759 - 1578805 + | thiamine-phosphate pyrophosphorylase TERM 1138 1579580 - 1579568 - g 74 -2.6 -4.91109 | overlap 1579569 GTTGGAGGAGAAAAA GCAG GCCAT CCGC CAGACCGGCATCCTG CYA_1570 1578942 - 1580483 + | AAA family ATPase TERM 1139 1582022 - 1582011 - g 85 -5.8 -5.0538 | opp_overlap 1582001 CTGCAGTGGAAAAAA GCCA CCTT TGGC TACATCCCCGGACGC CYA_1571 1580613 - 1582763 + | oxidoreductase, FAD-binding CYA_1572 1583158 - 1583496 + | hypothetical protein CYA_1573 1583545 - 1583886 + | histidine triad family protein cobH-2 1583968 - 1584618 + | precorrin-8X methylmutase TERM 1140 1585095 - 1585120 + G 93 -8.3 -5.17353 | gap 1 CCACTGCGGCCAGCC GGGAT-CCCTCT GGG AGAGGGTAGCCC TTTTTTCCTCCATGT CYA_1575 1584648 - 1585166 + | hypothetical protein CYA_1576 1586977 - 1585247 - | putative diflavin flavoprotein TERM 1141 1586094 - 1586106 + g 83 -4.7 -5.08824 | overlap 1586095 AGATCCGCCAGCTCT ACGGC AAC GCCGG TTTTTTGGATGCCGC CYA_1577 1588858 - 1587092 - | GTP-binding protein CYA_1578 1589078 - 1588905 - | hypothetical protein CYA_1579 1589561 - 1589130 - | hypothetical protein CYA_1580 1589835 - 1589713 - | hypothetical protein CYA_1581 1590858 - 1589902 - | carbohydrate ABC transporter permease TERM 1142 1589951 - 1589937 - G 83 -9.2 -4.29432 | GAAAGGGGATCAAAA GAGCGC GGG GCGCCC TGGCATGGCGAGAGA CYA_1582 1591914 - 1590865 - | carbohydrate ABC transporter permease TERM 1143 1591056 - 1591014 - G 71 -4.6 -4.4078 | CCCCGGCAATGAAAA CTGCGGCCCCCACCACTCCC AAG GGATGCAGTTGGGCCAACAG GGCAACAACAATGCC CYA_1583 1593466 - 1591904 - | carbohydrate ABC transporter ATP-binding protein CYA_1584 1594466 - 1593438 - | Tat (twin-arginine translocation) pathway signal sequence/basic membrane protein TERM 1144 1593498 - 1593484 - GH 73 -2.8 -4.77567 | ATGGCTACAACAAAA GACCCT GCC AGAATC TCTGCCTGCCGCTGC TERM 1145 1596072 - 1596104 + G 78 -15 -2.97171 | overlap 1596055 1596069 1596087 1596099 GCCGGAGGCCTTAAG CCCG-CCCTGTACTGC GAA GCAGT-CAGGGTCGGG TAGTTTACTCAACTG CYA_1585 1594890 - 1596107 + | ISSoc1, transposase codA 1596165 - 1597439 + | cytosine deaminase CYA_1586 1597876 - 1597436 - | hypothetical protein CYA_1588 1598534 - 1597902 - | 5-formyltetrahydrofolate cyclo-ligase family protein TERM 1146 1598441 - 1598456 + g 80 -4.6 -4.82901 | GTAGCTGGCGAAAGT GCTGGC GCAG GCGAGC TTTTTCTAGGGCAGG CYA_1589 1599034 - 1598579 - | peptidyl-prolyl cis-trans isomerase, FKBP-type TERM 1147 1599046 - 1599068 + r 73 -5.5 -4.65895 | GCATCTGTTTCATCC GTTGGCGTC CCCCC GGTGCCGAC TTTTTGCCTCCCCAA CYA_1590 1599743 - 1599102 - | hypothetical protein TERM 1148 1600665 - 1600677 + G 80 -4.8 -4.82901 | overlap 1600662 GGCCCAGGCCCATGG CTGG CCCAT CCAG TTTTTCTCCGCCGCG cbiG/cobJ-1 1599799 - 1601667 + | cbiG protein/precorrin-3B C17-methyltransferase CYA_1592 1601950 - 1601699 - | hypothetical protein TERM 1149 1602482 - 1602493 + G 93 -7.2 -5.00616 | TTGGGCCGCTTTGCC GCCC TGAT GGGC TTTTTTGAGGGGGGG TERM 1150 1602526 - 1602538 + G 74 -9.1 -3.89346 | overlap 1602514 GACGGGGATCGCCCT CAGCG ATT CGCTG TTTCTCAGCTACGCG CYA_1593 1602098 - 1603957 + | NAD(P)H-quinone oxidoreductase subunit F TERM 1151 1604319 - 1604335 + G 76 -7.9 -4.36914 | overlap 1604302 GTGTTGCTGCTAGCA GCCGCCA TTG TGGGGGC TTTTCTGGCCCAGAA CYA_1594 1603971 - 1605488 + | NADH-ubiquinone/plastoquinone oxidoreductase subunit 4 family protein CYA_1595 1605542 - 1606801 + | CO2 hydration protein TERM 1152 1606789 - 1606809 + F 72 -9.8 -3.56727 | opp_overlap 1606786 CGCCCCTAGACAGTC CTTTGAGG CATAA CCTCAAAG TTCTGCTTACTTCGG TERM 1153 1607886 - 1607872 - g 95 -11.4 -4.58685 | overlap 1607860 AAACTGGCCCAAAAA GCCCTG CGC CAGGGC ACCACTCCCTTTACG CYA_1597 1607176 - 1608336 + | putative soluble hydrogenase, tritium exchange subunit TERM 1154 1608449 - 1608427 - f 74 -3.4 -4.98103 | opp_overlap 1608441, overlap 1608428 TAACAAAAGATAAAA TTCCAGAG TCGACTG CTCTGGAG AGCTATCTGTTCCCA TERM 1155 1609058 - 1609024 - g 74 -2.6 -4.84359 | overlap 1609025 CTACGCCTACAAAAA CCCCGACATTTGGGCT CCC AGCCCAGAGGAGGCGG CGATTGGGGAAAAGC CYA_1598 1608479 - 1609147 + | phosphotransferase domain-containing protein CYA_1599 1610215 - 1609166 - | VIC family potassium channel protein TERM 1156 1609458 - 1609480 + g 70 -7.6 -4.08945 | opp_overlap 1609442 TCCACCACGCGGGGG CGCAGGGCAG CCG CTGCCATCCG TTTTCCACCGGTGAT CYA_1600 1610304 - 1610516 + | hypothetical protein CYA_1601 1610786 - 1610556 - | hypothetical protein TERM 1157 1610699 - 1610686 - G 76 -8.1 -4.13767 | GGGCCGACGCCAAAA TCCGG CTCA CCGGA AGCCAACTCGAAAAT TERM 1158 1610840 - 1610819 - R 87 -10.1 -4.58395 | opp_overlap 1610819 TCTATTCGCGAAAAA GCCCTCCCA CTCT CGAGAGGGC TACTTTCTATGCTAC petE 1611348 - 1610938 - | plastocyanin CYA_1604 1612112 - 1613059 + | ISSoc4, transposase orfAB CYA_1605 1613624 - 1613457 - | hypothetical protein CYA_1606 1614027 - 1614413 + | hypothetical protein CYA_1607 1614468 - 1614686 + | hypothetical protein CYA_1608 1614729 - 1615568 + | hypothetical protein CYA_1609 1615590 - 1616315 + | cobalt ABC transporter ATP-binding protein CYA_1610 1616391 - 1616552 + | hypothetical protein ccmK-1 1616847 - 1617155 + | carbon dioxide concentrating mechanism protein CcmK ccmK-2 1617247 - 1617588 + | carbon dioxide concentrating mechanism protein CcmK ccmL 1617589 - 1617888 + | carbon dioxide concentrating mechanism protein CcmL ccmM 1617937 - 1619901 + | carbon dioxide concentrating mechanism protein CcmM CYA_1615 1619982 - 1620671 + | hypothetical protein TERM 1159 1621036 - 1621002 - g 71 -4.9 -4.4017 | gap 1, opp_overlap 1621030, overlap 1621003 1621004 TCAACTGGCACAAAA CCGCGGCTACAGCCGC CTCA GCAACT-TGGCCGTGG GCCTGCTGGAAACCC CYA_1616 1620703 - 1621419 + | microcompartments family protein CYA_1617 1621688 - 1622101 + | hypothetical protein rplS 1622881 - 1622498 - | 50S ribosomal protein L19 CYA_1620 1623053 - 1624450 + | RND family efflux transporter MFP subunit macB 1624447 - 1625658 + | macrolide ABC transporter, permease protein thrB 1625731 - 1626651 + | homoserine kinase dgkA 1627374 - 1626880 - | diacylglycerol kinase CYA_1624 1628002 - 1627406 - | hypothetical protein eda 1629023 - 1628283 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 1160 1628449 - 1628420 - G 86 -13.5 -3.90744 | CTTGCTGGGAAAGAA GCTCCGCCGGGAA GAGA TCCCCGGCGATGC CGACAGCCCAGGCCC TERM 1161 1630423 - 1630407 - g 77 -4.3 -4.85599 | overlap 1630411 1630412 GGCAGCCCAGAAAAA CCAACTG CAG CAGCAGG CTGCCGCCCAAGAGC CYA_1627 1629793 - 1630971 + | M23B family peptidase CYA_1626 1631612 - 1630962 - | ABC transporter, ATP-binding protein CYA_1628 1631919 - 1631671 - | hypothetical protein CYA_1629 1632071 - 1632571 + | low molecular weight phosphotyrosine protein phosphatase family protein CYA_1630 1632902 - 1632594 - | NADH dehydrogenase subunit K TERM 1162 1632899 - 1632888 - G 81 -2.2 -5.15167 | GACCACCAAGAAAAA CTGC AGTT GCAA CATCACAAGAGGCTC CYA_1631 1633587 - 1632979 - | NADH dehydrogenase subunit J CYA_1632 1634978 - 1633707 - | hypothetical protein TERM 1163 1634010 - 1634050 + g 76 -8.9 -4.18197 | opp_overlap 1633991 1634022 1634025 AGCTGCCCCCTGACA GCTAGGGCAAAACCAGC CGTAGTA GCTGGCTCTGCCCCGGC TTTTGGCTAAGCGAT CYA_1633 1635933 - 1635202 - | biotin/lipoate A/B protein ligase family protein CYA_1634 1636400 - 1635933 - | hypothetical protein TERM 1164 1636094 - 1636084 - G 72 -2.4 -4.70659 | TTCCAGATGCAAAAA CGGG CTT CCAG AGTTTCGCTCCAGTT TERM 1165 1636904 - 1636886 - H 71 -4.4 -4.60487 | overlap 1636868 GAGGATTCTCAAAAA CCTAAGGG AAG CCCTATGG AAACTCCATCCCACC mtnN 1636901 - 1637653 + | MTA/SAH nucleosidase TERM 1166 1638056 - 1638077 + F 70 -11.5 -3.00022 | CAGAAAAAAGCTTTG GCCCCTGCC TTTA GACAGGGGC TCTCTCTAAGCTAAG rpsB 1638377 - 1639180 + | ribosomal protein S2 TERM 1167 1639448 - 1639428 - g 78 -3.2 -5.05782 | gap 1, overlap 1639429 ATGGACTGTAAAAAA GCC-CTGGA AGAG TCCGGTGGC GATATGGAGAAAGCC tsf 1639356 - 1640204 + | elongation factor Ts CYA_1640 1640411 - 1641823 + | amidohydrolase family protein TERM 1168 1642782 - 1642768 - g 73 -11.4 -3.66178 | CGCCGCAACGCCAAA GCCGCT CTC AGCGGC CATTCGGGCTCCACA CYA_1641 1641847 - 1642875 + | putative iron-sulfur cluster binding protein CYA_1642 1643128 - 1642886 - | putative transposase, truncation CYA_1643 1643344 - 1643526 + | hypothetical protein CYA_1645 1644320 - 1644937 + | ISSoc2, resolvase TERM 1169 1646037 - 1646060 + GT 70 -11 -3.04461 | AATGCTATCGCTTCA CCGCTGAGCA GTAA TGCTCAGCAG TGTTCAGCGTAAATG CYA_1646 1644792 - 1646072 + | ISSoc2, transposase dnaN 1647641 - 1646277 - | DNA polymerase III subunit beta TERM 1170 1646782 - 1646766 - G 70 -10.1 -3.55444 | CTGCGACCGGTCAAA CCGCAGT TCC ACCGCGG AGGCGGCCGTCTGGG TERM 1171 1647922 - 1647964 + H 86 -9.3 -4.7416 | gap 1, opp_overlap 1647922 1647921 1647919 ACAAGGTATAAATAC TCTGTGGATAACTCG-GGAG GTTT TTCCACAAGTTTTCCACAGA TTTTTGAAGTTTTCC TERM 1172 1648099 - 1648148 + H 75 -9.4 -4.08216 | gap 2, opp_overlap 1648116, overlap 1648107 TTGCTCTAGATGTGG TCTG-GGGA-TCCCATGAAGGCTG GGGG CGGCCTTCGGGGGATTTCCACAGG TTTTCCACAGGCTGC TERM 1173 1648107 - 1648138 + H 81 -13 -3.57309 | opp_overlap 1648116, overlap 1648099 GATGTGGTCTGGGGA TCCCATGAAGGCTG GGGG CGGCCTTCGGGGGA TTTCCACAGGTTTTC TERM 1174 1648229 - 1648217 - g 83 -9.1 -4.34402 | CCCGCCAGACCAAAA GCTCG CAT CGAGC TCAGGTGCGGCTGAA TERM 1175 1648401 - 1648383 - g 71 -5.3 -4.4261 | gap 1, opp_overlap 1648399, overlap 1648377 1648386 1648398 GTTTCAAGATGAAAA CGACCGTT TGCA AACGG-CG GTCAAAGACCGATTG CYA_1649 1648111 - 1648440 + | hypothetical protein CYA_1650 1649500 - 1648460 - | dihydrouridine synthase family protein TERM 1176 1648744 - 1648761 + g 78 -9.8 -4.08945 | CCAGGGGGGTAGGAG CCGGCC TTTCTT GGCCGG TTTTCAGGAAGTGAT TERM 1177 1648898 - 1648882 - G 76 -6.5 -4.40804 | overlap 1648884 CATCAGTCGAGAAAA TATCGCC GTT GGCGATC ACCGGAATGCGTAAG TERM 1178 1648896 - 1648884 - G 71 -9.1 -3.80877 | overlap 1648882 TCAGTCGAGAAAATA TCGCC GTT GGCGA TCACCGGAATGCGTA rpsR 1649779 - 1649564 - | 30S ribosomal protein S18 rpmG 1650003 - 1649809 - | 50S ribosomal protein L33 CYA_1653 1650863 - 1650093 - | RDD family protein TERM 1179 1650306 - 1650326 + g 73 -3.1 -4.72986 | opp_overlap 1650306, overlap 1650307 1650308 TTCTCCCTCCAGAAT TTCCTGCAG CAG CCGCAGGGC TTTTTCATCCAGGTG rnz 1651969 - 1650995 - | ribonuclease Z TERM 1180 1651098 - 1651081 - G 72 -4.1 -4.56597 | TGGTGTTGGGAAAAA TGGCC CGGGCTTC GGCCA GCAGGTCTTCCAAAG CYA_1655 1652092 - 1652448 + | iron-sulfur cluster assembly accessory protein CYA_1656 1653678 - 1652449 - | sensor histidine kinase/response regulator CYA_1657 1658044 - 1653665 - | sensory box histidine kinase/response regulator TERM 1181 1656529 - 1656517 - G 85 -6.2 -5.09762 | GCTGAACAAAGAAAA GCCG CCGCT CGGC CAACTCCGGTGGCAA TERM 1182 1656889 - 1656877 - G 80 -6.2 -4.67943 | overlap 1656879 GCTGAACATAGAAAA GCCG CTGCT CGGC CAGCGCTGGCGGCAG TERM 1183 1657652 - 1657631 - G 77 -2.1 -5.02074 | opp_overlap 1657633 1657647, overlap 1657633 GTATTTCTCAAAAAA GCCCCCCCA GCGG TTGATGGGC AGCAGCTCGCACAGC TERM 1184 1657897 - 1657882 - G 74 -9 -3.88583 | GAAATCTTCGAGAAA GGGATC CCAG GATCCC TCTGAAGACAGAAAG TERM 1185 1658296 - 1658318 + r 73 -5.4 -4.59773 | overlap 1658298 AAGATTCAGCGGGAT CCCTGGCGCC AGC GGCGGTAGAG TTTTTCCAGATCCAC CYA_1658 1661042 - 1658286 - | calcium-translocating P-type ATPase, PMCA-type TERM 1186 1660647 - 1660662 + g 85 -6.1 -5.00616 | CCGCTGCACCCGCAC GCTGG GGGAGG CCAGC TTTTTTAGGGCCGCC TERM 1187 1662547 - 1662573 + G 71 -8.6 -3.90318 | CTCTGTGTGGTGACC GCCTTGCAGGAT GGG ATCCCGCGCGGC TTTCTCACCTGGTCA CYA_1659 1661167 - 1662945 + | putative diflavin flavoprotein TERM 1188 1663252 - 1663274 + G 79 -8.4 -4.25848 | CCCTATTGAGCCCTC CCGGGGCT GGGACGA AGCCCTGG TTTTCATCAACGGTT CYA_1660 1662980 - 1663897 + | hypothetical protein CYA_1661 1663936 - 1664334 + | ISSoc4, transposase orfA CYA_1662 1664316 - 1664882 + | ISSoc4, transposase orfB CYA_1663 1665244 - 1666608 + | phosphoglycerate mutase family protein CYA_1664 1666620 - 1667954 + | dihydroorotase CYA_1665 1668088 - 1669062 + | YihY family protein CYA_1666 1669031 - 1670131 + | Sua5/YciO/YrdC/YwlC family protein purE 1670101 - 1670631 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit CYA_1668 1670799 - 1671482 + | hypothetical protein CYA_1669 1671618 - 1672607 + | putative cobalamin biosynthesis protein CobW CYA_1670 1672706 - 1673014 + | hypothetical protein CYA_1672 1673017 - 1673238 + | hypothetical protein CYA_1671 1673291 - 1673208 - | hypothetical protein guaA 1674907 - 1673291 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1189 1673783 - 1673802 + g 76 -6.4 -4.4261 | gap 1, opp_overlap 1673737 CAGATTCTCCGGCAA GCCGCCGAC GTT GT-GGTGGC TTTTGATCTTGACGG TERM 1190 1674083 - 1674064 - G 76 -9.2 -4.07687 | opp_overlap 1674059 1674064 1674065 ATTGCTCTTGGAAAA GGCGCAGC AGCC GCTGCGGC TCATCTTTGCGCATG CYA_1674 1675216 - 1676220 + | hypothetical protein TERM 1191 1676723 - 1676679 - g 73 -12.8 -3.16668 | gap 1, overlap 1676669 CAAGACCCGCAGGAA CGCGGCAGCTACGA-TCTGGC CTTG GCCAGAGCCGTGGCAGCGGCG GAGATCTGCGCCGAG gidB 1676217 - 1676999 + | glucose-inhibited division protein B CYA_1676 1677130 - 1677020 - | hypothetical protein TERM 1192 1677309 - 1677322 + G 83 -9.5 -4.26881 | overlap 1677312 TGGATCGGGAGACGG GCCGC AAGC GCGGC TTTGCTTTTGTGGAA TERM 1193 1677385 - 1677365 - g 78 -5.4 -4.77036 | GCCGACGAGCAAAAA GCCATCGA TGAGT TGGATGGC GCCACCTGGATGGGC CYA_1677 1677194 - 1677484 + | putative RNA-binding protein TERM 1194 1677499 - 1677522 + T 95 -15.3 -3.84451 | ATCCGATAGGCTCTG GGCCGGGGA TCCCTC TCCCCGGCC TTTAGCTTTGGCCGA CYA_1678 1678357 - 1677524 - | manganese/zinc/iron chelate ABC transporter permease TERM 1195 1677587 - 1677569 - G 74 -10.2 -3.77241 | overlap 1677557 AAAGGCCAAGCCAAA CCAGGTGG AGG CCACCAGG ACAATAGCCGGGCCA CYA_1679 1679128 - 1678373 - | manganese/zinc/iron chelate ABC transporter ATP-binding protein CYA_1680 1679191 - 1680126 + | cation ABC transporter, cation-binding protein aspS 1680199 - 1682004 + | aspartyl-tRNA synthetase CYA_1682 1682064 - 1682840 + | enoyl-(acyl carrier protein) reductase TERM 1196 1682981 - 1682995 + G 82 -3.4 -5.15634 | overlap 1682983 CACCACCATCCTGAC GGCGGC GGT GCTGGC TTTTTTGCTCAACTA TERM 1197 1683551 - 1683561 + G 90 -8.2 -4.89521 | TGGGTTTTTGCGCGT GCCC TTC GGGC TTTTGTTTGGCCTGT TERM 1198 1683627 - 1683650 + G 73 -11 -3.60234 | gap 1 GGCTTTATTGGCATC GGCGCGGCAGC GGT GCTGCTG-GCC TTTCAGGATATCTGG CYA_1683 1682862 - 1683998 + | hypothetical protein TERM 1199 1684138 - 1684104 - T 72 -6.4 -4.36914 | gap 1 TTTCCCTCGATAAAA GGCACC-TCCAGCAC CTTTTC GTGGTGGATGGGGCC ATGGCCAAAATAGCC CYA_1684 1684966 - 1684079 - | hypothetical protein CYA_1685 1685463 - 1684963 - | hypothetical protein CYA_1686 1686058 - 1685534 - | cytochrome c-550 CYA_1687 1686594 - 1686058 - | cytochrome c-550 CYA_1688 1686986 - 1688047 + | hypothetical protein TERM 1200 1688059 - 1688079 + G 73 -8.9 -4.08394 | overlap 1688075 CTAAGCTTCTGGGCC GCCTCAAGG GAT CCCTGGGGC TTTTGGCCGGCCTAT CYA_1689 1688040 - 1689731 + | dolichyl-phosphate-mannose-protein mannosyltransferase TERM 1201 1689874 - 1689860 - g 71 -12.8 -3.02144 | CCATTTTGCTCAATA CCGGCC AGG GGCCGG GCAAGCTCTCGGCTG radC 1689739 - 1690470 + | DNA repair protein RadC fmt 1691523 - 1690555 - | methionyl-tRNA formyltransferase TERM 1202 1690867 - 1690896 + g 78 -3.5 -5.00616 | gap 1, overlap 1690873 GTGCAAGGCCTGGGC CGGGCGCTGCCAGT CGA GCTGGAAGT-CCTG TTTTTTAAGCAGGGG CYA_1692 1692159 - 1691548 - | hypothetical protein mgtE-2 1693732 - 1692332 - | magnesium transporter TERM 1203 1692468 - 1692455 - G 85 -5.9 -5.08601 | GGAGCGGAACAAAAA GGGCA GCCC CGCCC CCGACACCGAAGAGA CYA_1694 1695745 - 1694021 - | iron-sulfur cluster-binding protein TERM 1204 1695598 - 1695616 + g 83 -8 -4.56597 | CACCACTGATGATGT GCCCGCCG AAT TGCCGGGC TTTTTCCAAAAGGGC TERM 1205 1696213 - 1696245 + G 72 -2.6 -4.76963 | gap 1, overlap 1696214 1696214 TCCTTTTTCTACTAT TC-GCGGGATCCACA TTCT TGGGGATCACGCAGC TTTTATCTTGTATCC CYA_1695 1696037 - 1697485 + | hypothetical protein TERM 1206 1697863 - 1697878 + G 76 -6 -4.59773 | GCAGGGCGGCATTGC GGCGGC AGTG GCCACC TTTTTCGGCCTGCCG CYA_1696 1697729 - 1699789 + | hypothetical protein TERM 1207 1699831 - 1699857 + T 100 -14.5 -4.18934 | opp_overlap 1699830 1699827 GCATCACGCAATCAG GCGGCAGGGAT CCTTC ATCTCTGCCGC TTTCTTGCACTCATA ilvD 1701610 - 1699913 - | dihydroxy-acid dehydratase TERM 1208 1701209 - 1701224 + g 77 -4 -4.82901 | gap 1, overlap 1701198 ACGGGCCATGGCGAT CATCGCC CCC GGC-ATG TTTTTGTCGCAGCCG TERM 1209 1701685 - 1701664 - H 100 -5.9 -5.86332 | CCAATTCAAAAAAAA CAAGTAGAA CCTA TCCTACTCG GTTTTTCGCCAGGCA fbp 1701867 - 1702865 + | fructose-1,6-bisphosphatase TERM 1210 1703289 - 1703305 + G 79 -9.3 -4.18494 | opp_overlap 1703281 1703279, overlap 1703291 ACGAAGAGCGGGGCA CCCGCGG CAA CCGCGTG TTTTACCTGGCGGTG TERM 1211 1703291 - 1703303 + G 74 -10.5 -3.69216 | opp_overlap 1703281 1703279, overlap 1703289 GAAGAGCGGGGCACC CGCGG CAA CCGCG TGTTTTACCTGGCGG zwf 1702907 - 1704457 + | glucose-6-phosphate 1-dehydrogenase TERM 1212 1704651 - 1704666 + G 73 -3.2 -4.74801 | GCCGCCACTGTTATT CCGG TTGTCTGT CCGG TTTTTGCTAACCTTG CYA_1700 1704610 - 1705548 + | TPR repeat-containing protein dxs 1707500 - 1705551 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1213 1706804 - 1706827 + g 70 -10.4 -3.55444 | gap 1, opp_overlap 1706798, overlap 1706807 CGGCAGTAACCAGCT TC-ACCGTCTC CTT GAGACGGTCGA TTTCCGGGCTGAGGC TERM 1214 1707542 - 1707572 + H 73 -12.7 -2.65884 | gap 1, opp_overlap 1707540, overlap 1707541 1707568 TCACTGTGACATACT CCCGCACTC-ATGC TGAC GTATAGAGTGCGGG CTTCTCGCTTCGTCG TERM 1215 1707680 - 1707690 + H 79 -8.2 -4.38712 | AGTTGCACCAGGTTC CGGC AAC GCCG TTTTCTACAACTAGA cysK 1708008 - 1708988 + | cysteine synthase A ileS 1711828 - 1709018 - | isoleucyl-tRNA synthetase TERM 1216 1710746 - 1710787 + g 72 -4.3 -4.59511 | overlap 1710749 1710749 1710779 GGCCTCGGCGGTGAA TCTCCCCTGCTCATCCACA GGGC TGAGGATGGGCAGGCCGTA TTTTTGGCCGGTCTT CYA_1704 1713088 - 1712348 - | hypothetical protein TERM 1217 1713207 - 1713218 + H 75 -5.8 -4.62772 | overlap 1713205 CTGGGGGCCTCCGGC GGCA AATC TGCC TTTCTTTAGTTTAGC TERM 1218 1713771 - 1713724 - g 71 -13.4 -2.57132 | gap 1, opp_overlap 1713723, overlap 1713723 CCCCTCTCCCAGAAG CGCCCTCACCCCCAGC-CCCTCT CCC AGAGGGAGAGGGGAGTTAGAGCG GTGCGTTCGCAACCG CYA_1705 1713324 - 1713767 + | rhodanese domain-containing protein TERM 1219 1715366 - 1715395 + G 83 -7.7 -4.59773 | GCGGGGCTGGACTAC GGCCACGGTACCG GCCA CGGTGTCGGCGCC TTTTTGAACGTCCAC CYA_1706 1713944 - 1715746 + | M24B family peptidase CYA_1707 1715835 - 1716260 + | hypothetical protein TERM 1220 1716789 - 1716778 - T 72 -2.2 -4.95618 | AAGAGGAAAAAGAAA CTCG CACT CAAG AGGAGTTTGGCGGAT TERM 1221 1717358 - 1717370 + T 74 -7.7 -4.26881 | CGTCCCCCTTCATAC GATGC TCA GCATC TTTCCTTTTCTAAGC CYA_1709 1719319 - 1717994 - | aminotransferase, classes I and II CYA_1710 1720002 - 1719052 - | hypothetical protein TERM 1222 1719190 - 1719172 - G 82 -5.8 -4.88067 | opp_overlap 1719186 1719187, overlap 1719173 ACTCAGGCACAAAAA GGGCAGGG CCA CCAGGCCC CAACGGGCGCTTTGC TERM 1223 1719714 - 1719695 - GR 82 -13.6 -3.53012 | TTGCCCGGCTCCAAA CCCTGGGT CAGC ACCCAGGG GCTGAGTCCCCACAG CYA_1711 1720778 - 1720146 - | hypothetical protein TERM 1224 1720727 - 1720690 - G 83 -12.7 -3.8709 | gap 1, opp_overlap 1720708 1720711, overlap 1720694 AAAGCCGCCGACAAA CCTATCCGCCACCCC-CC TCG GGCGGGGTGGGGGAAAAG ATACCCGCCCGCTTG TERM 1225 1720723 - 1720694 - G 75 -14.3 -2.70354 | gap 1, opp_overlap 1720708 1720711, overlap 1720690 CCGCCGACAAACCTA TCCGCCACCCC-CC TCG GGCGGGGTGGGGGA AAAGATACCCGCCCG pyrF 1721488 - 1720790 - | orotidine 5'-phosphate decarboxylase TERM 1226 1720917 - 1720881 - G 70 -7.2 -4.0274 | gap 2, opp_overlap 1720905 CCCACCACCAAATAA TCGGCCCCCGCCCGCAGC GCT GCCGCGGG-GGTG-CAGA CCCGCCGCTGGTCGT CYA_1713 1722021 - 1721509 - | hypothetical protein CYA_1714 1722337 - 1721996 - | hypothetical protein TERM 1227 1722174 - 1722207 + gr 71 -11.5 -3.15354 | overlap 1722172 GAGCCGGAACCCTTT GCGGGCCCTGGAGCC AGGC GGCGTCCGGGCCCGA TGTTCAGTTGCAGTA CYA_1715 1723214 - 1722402 - | hypothetical protein CYA_1716 1723624 - 1723211 - | hypothetical protein TERM 1228 1723370 - 1723357 - G 100 -3.7 -5.42605 | overlap 1723358 1723359 GGAAGAAAAACAAAA TCGGC ACCG GCCGC CAGAAGATCTGCCAG TERM 1229 1723818 - 1723828 + G 86 -6.8 -5.02476 | CTCTCCCCAGCGGCG GCTC CCT GAGC TTTTTTGAGCGCTAT TERM 1230 1724572 - 1724591 + G 81 -6.5 -4.71426 | TAAAGGGGATCTCAT TGTGGAA AATCCC TTCCACA TTTTGTTGATCGCAG TERM 1231 1724657 - 1724671 + G 71 -11.4 -3.4678 | ATCACCTATGTGGCA GCCCAG AAA CTGGGC TTGTGCTATGAGGAT TERM 1232 1724844 - 1724854 + G 90 -8.2 -4.86731 | TGGTGGAGATCTGCC GGCG TAC CGCC TTTTATTTCCCCCGC CYA_1717 1723769 - 1724923 + | anion:cation symporter (ACS) family protein CYA_1719 1724940 - 1725356 + | hypothetical protein CYA_1718 1725685 - 1725323 - | ArsR family transcriptional regulator CYA_1720 1725843 - 1726559 + | metallo-beta-lactamase family protein TERM 1233 1726947 - 1726935 - g 76 -5.5 -4.65916 | TCTATTGGAAGAAAA CCCCA GCT TGAGG CCCTATTTGCCGGAG CYA_1721 1726657 - 1727124 + | hypothetical protein CYA_1722 1727144 - 1727725 + | rhodanese domain-containing protein TERM 1234 1729415 - 1729425 + G 73 -8.2 -4.02817 | TTGTGGAGAAAGTGG GCGC CGA GCGC TTCTTCTTGTCGACC sulP 1727722 - 1729503 + | sulfate permease CYA_1723 1730680 - 1729478 - | hypothetical protein trx-2 1730944 - 1731276 + | thioredoxin TERM 1235 1731566 - 1731515 - g 71 -13 -2.98823 | CTGGCTGGACAGATA GGATCTCCAGACACTCAGCCAGAG TCCC CTGTTACTGAGGGGCCGGAGATCC TGCGGGTGGAGCGGG lipB 1731290 - 1732072 + | lipoyltransferase CYA_1726 1732401 - 1732069 - | TPR repeat-containing protein CYA_1728 1733079 - 1732498 - | hypothetical protein TERM 1236 1733120 - 1733141 + H 71 -7.1 -4.25104 | opp_overlap 1733119, overlap 1733121 ACACCGCAAGCCAAG CCCGCAGGG ATCC CCCAGCGGC TTTTCCTCGAGGGGG TERM 1237 1733377 - 1733387 + G 76 -8.2 -4.14392 | opp_overlap 1733358 1733366 CAAAGCCGCCTTTGA CCCG GCG CGGG TTTTGGAAATTGAGG purB 1733213 - 1734508 + | adenylosuccinate lyase TERM 1238 1735044 - 1735029 - g 73 -6.8 -4.30978 | opp_overlap 1735029 1735027 TGCAAGGGATCAAAA TCGCCA TTGT CGGCGA TATTCTCCACTCGCG TERM 1239 1735196 - 1735215 + G 73 -3.4 -4.77567 | overlap 1735198 CATTGGCAGCTGGAG CCTGCCCT CGAA GGGGCGCG TTTTGTTATCACCCT pyrB 1734518 - 1735498 + | aspartate carbamoyltransferase catalytic subunit TERM 1240 1735633 - 1735600 - T 81 -10.3 -4.19276 | opp_overlap 1735610 TCAAAACTGTCAAAA GTCGGAAGAAGCTCT GGCC AGAGCTTTTCCCGCC CTGCTGAAATCATGT CYA_1731 1735908 - 1735747 - | hypothetical protein TERM 1241 1735808 - 1735835 + g 89 -11.4 -4.26903 | gap 1, overlap 1735811 1735812 GCAGCATAAGCCTTT TCGCGGATCCTGG GCT CCAGGATCC-TGA TTTTGCTGAAATCCA TERM 1242 1735811 - 1735834 + g 70 -11.8 -3.1582 | gap 1, overlap 1735808 1735812 GCATAAGCCTTTTCG C-GGATCCTGG GCT CCAGGATCCTG ATTTTGCTGAAATCC TERM 1243 1735812 - 1735832 + g 83 -15.5 -3.13772 | overlap 1735811 1735808 CATAAGCCTTTTCGC GGATCCTGG GCT CCAGGATCC TGATTTTGCTGAAAT TERM 1244 1736256 - 1736272 + G 76 -10.1 -3.90318 | GGCACTGTGGACTTC GGCGCTT CCG AGGCGCC TTTCTCCGGTGCTCG pstS-3 1736016 - 1737077 + | phosphate ABC transporter, phosphate-binding protein TERM 1245 1737552 - 1737562 + G 100 -6.8 -5.40072 | overlap 1737547 CATCCCTCTGGGCAT TGGC ACT GCCA TTTTTTTGACGGAAG pstC-2 1737226 - 1738209 + | phosphate ABC transporter, permease protein PstC TERM 1246 1739097 - 1739114 + G 72 -2.6 -4.8048 | overlap 1739091 1739094 GCCACTGTTTTGGCG GCCAGC TTGATC GCTCGC TTTTTGGTGTACAAG pstA-2 1738248 - 1739141 + | phosphate ABC transporter, permease protein PtsA pstB-2 1739212 - 1740009 + | phosphate ABC transporter, ATP-binding protein TERM 1247 1741061 - 1741047 - g 80 -5.6 -4.77165 | overlap 1741048 TGGTTTACAACAAAA CGGCCC AGG AGGCCA GCAAGGGGATCTCGC CYA_1736 1740122 - 1741489 + | FAD-binding protein CYA_1737 1742082 - 1741648 - | hypothetical protein CYA_1738 1743493 - 1742438 - | putative permease TERM 1248 1743438 - 1743428 - G 74 -2.4 -4.87626 | CCCCAAGAGCAAAAA GGGC ATG GCCT GCACCACGATGCTCA CYA_1739 1744708 - 1743572 - | methylcitrate synthase CYA_1740 1745444 - 1744902 - | hypothetical protein TERM 1249 1747649 - 1747636 - g 100 -9.5 -4.93296 | overlap 1747646 GGAGGATGAGAAAAA GCCCG TAAA CGGGC ACAACGGGAGCCCTG CYA_1741 1745846 - 1747699 + | hypothetical protein CYA_1742 1748325 - 1747942 - | hypothetical protein TERM 1250 1748097 - 1748126 + g 74 -9.3 -3.84719 | gap 1, overlap 1748093 GGTTCTGCAGCCAGG TG-CCAACGCCGGT TTT GCCGTCGTTGGGCA TTTCGGTTTGGAAGT CYA_1743 1749167 - 1748697 - | hypothetical protein TERM 1251 1749517 - 1749531 + G 78 -7.1 -4.66987 | GCTGGGGGGGATCTG GGCTG GCTTA CAGCC TTTTGTTAACCTGTA CYA_1744 1749395 - 1749670 + | hypothetical protein CYA_1745 1749682 - 1749852 + | light-independent protochlorophyllide reductase, B subunit, truncation TERM 1252 1749905 - 1749922 + F 77 -3.4 -5.03715 | overlap 1749907 TTGCCGCTAGCTTGG TAGAGG TGTTCT CCTCTG TTTTTTGCAACTCAT TERM 1253 1750356 - 1750366 + G 71 -5.4 -4.45696 | AAGCTCAACCACTGC TTCC CCT GGAA TGTTTTTTATTTGCA TERM 1254 1750516 - 1750531 + G 100 -5.4 -5.54192 | overlap 1750480 1750524 TGGTGCTGCAGGAGG GGTTTG CCGG CAAGCC TTTTTTTGCCTTGGT TERM 1255 1750584 - 1750619 + G 74 -9.6 -3.92659 | overlap 1750578 TCCCTAACCCGTCAG CAGGAGTGGCCTCTGC TGGC GCTGGGGCTGCTGCTG TTTACCTTTTGGACG CYA_1746 1749936 - 1751471 + | M50B family peptidase TERM 1256 1753182 - 1753195 + G 87 -5.9 -5.18357 | opp_overlap 1753177, overlap 1753149 TGGAAACGTATCCCG GCGTG GCGG CGCGC TTTTTTGCTGCCTTG CYA_1747 1751516 - 1753342 + | aspartate kinase psbA-2 1754599 - 1753541 - | photosystem II protein D1 carB 1758147 - 1754923 - | carbamoyl phosphate synthase large subunit TERM 1257 1757048 - 1757034 - G 82 -11.4 -4.07568 | TCTGCGTGGTCAAAA CCGGCT CCG AGCCGG GAAACTTCTCAAAGG TERM 1258 1757567 - 1757547 - G 70 -12.5 -2.90212 | opp_overlap 1757536 CCAGGATCTGAGAGA CCGGGCTGG CCT CCAGGCCGG CGGCGCAGATCTCTT CYA_1750 1759216 - 1758557 - | putative monovalent cation/H+ antiporter subunit B CYA_1751 1759734 - 1759213 - | hypothetical protein CYA_1752 1760025 - 1759744 - | hypothetical protein CYA_1753 1760288 - 1760037 - | hypothetical protein CYA_1754 1760671 - 1760285 - | hypothetical protein CYA_1755 1762163 - 1760673 - | putative monovalent cation/H+ antiporter subunit D TERM 1259 1760943 - 1760958 + g 81 -7.5 -4.41348 | TGGCCAACCGGCTGC CGGGG TAGTGT CCCCG TTTGTTTGAGAAGGA TERM 1260 1761014 - 1760977 - G 71 -4.7 -4.48987 | overlap 1760979 GTTTGAGAAGGAAAA GCTCGCAGCACCCGCAC GGCT ATGCAGGTGGTGCCGAC AGTAACCCCCACCAG CYA_1756 1762494 - 1762156 - | putative monovalent cation/H+ antiporter subunit C TERM 1261 1763522 - 1763512 - H 76 -6.8 -4.63486 | overlap 1763514 AGCCGCGCAACAAAA CCGA GCG TCGG CGGTCCAATAGTTGG TERM 1262 1763729 - 1763682 - H 100 -20.4 -3.53012 | GGGGGCTGCTGTAAA CCAGCCGCCCTACATCCCCCCG TATA CGGGGGGAAGGGGGGCGGTCGG AGTCGGGTAGTTTAC CYA_1758 1764135 - 1764590 + | MarR family transcriptional regulator CYA_1759 1764986 - 1764600 - | hypothetical protein TERM 1263 1765284 - 1765262 - H 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG CYA_1760 1765417 - 1765914 + | TM2 domain-containing protein CYA_1761 1766704 - 1765922 - | putative ABC-2 type transporter, permease protein TERM 1264 1766257 - 1766237 - G 73 -3.1 -4.7373 | overlap 1766240 GGATCCCAGCAAAAA CGAGAAGCC ATA GGCCCCCAG CACCACGCTCGCCAA CYA_1762 1767636 - 1766701 - | drug exporter ABC transporter ATP-binding protein TERM 1265 1766949 - 1766935 - G 71 -12.8 -3.04322 | opp_overlap 1766941 1766944, overlap 1766925 CTCAATCCGGTAAGA GCCGGC GGC GCCGGC AAACTGCCGGATCAT mfd 1771210 - 1767740 - | transcription-repair coupling factor TERM 1266 1770463 - 1770490 + g 72 -2.6 -4.72272 | gap 1 ACTGCTCCAACTGCT GCCG-TAGGCCCT GGG AGAGCTGATCGGC TTTTTCCTGCAGAGC TERM 1267 1771725 - 1771738 + G 72 -2.3 -4.67556 | TTCTCGTCTACAGTT TGCCC TCAC GGCCA TTTTTCACATGTTGT TERM 1268 1771940 - 1771958 + G 78 -3.1 -5.00884 | TGAACTGGGCGCCCT TCTCCGA AGCAG TGGGAGA TTTTTTCGGCACCAT TERM 1269 1772004 - 1772016 + G 74 -9.1 -3.88291 | CACGATGGCTTTTAT GCTGG AGG CCAGC TTTCTGGGGATCATG cydA 1771687 - 1773120 + | cytochrome d ubiquinol oxidase, subunit I TERM 1270 1773923 - 1773937 + G 73 -3.4 -4.72497 | overlap 1773924 ATATCTTTGCTGCCA TCCCCG TTT TGGGGC TTTTGTTGGTGGCTC cydB 1773202 - 1774251 + | cytochrome d ubiquinol oxidase, subunit II CYA_1765 1774364 - 1774248 - | hypothetical protein TERM 1271 1774304 - 1774278 - G 81 -12.9 -3.78409 | opp_overlap 1774292 GCAATCCAATTGAAA CCCCGCCGGAC GTTTT GCCAGGCGGGG CAGGCTTTTATCTTG CYA_1767 1776115 - 1774361 - | hypothetical protein TERM 1272 1774940 - 1774928 - G 73 -3.3 -4.68424 | CAAGCCAGCCAAAAA CTGCC CCA GCCAG TAGAACACGGCCAGG TERM 1273 1775928 - 1775913 - G 86 -5.4 -5.17353 | opp_overlap 1775926 AGACTCACGAAAAAA GAGATG GTCT CATCCC CAATGGTGTTTCTCG rimI 1777009 - 1776482 - | ribosomal-protein-alanine acetyltransferase CYA_1769 1777441 - 1777016 - | hypothetical protein purK 1778568 - 1777438 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 1274 1778239 - 1778228 - G 83 -7.2 -4.56597 | TCTGCCGGCCAAAAA GCCG GCAC CGGC AACCCCAGCTCTGCC TERM 1275 1778318 - 1778337 + g 83 -7.8 -4.59773 | opp_overlap 1778317 1778318, overlap 1778320 AGGCGAGGACGAAAG CGGGATCC CTGC GGATCCAG TTTTTGCAGCTCCGC CYA_1771 1778635 - 1778847 + | hypothetical protein CYA_1772 1778902 - 1779495 + | ISSoc2, resolvase CYA_1773 1779350 - 1780630 + | ISSoc2, transposase CYA_1774 1780608 - 1781207 + | hypothetical protein TERM 1276 1781234 - 1781245 + G 77 -2.2 -5.00616 | TTCGACGTCATCACC CTCT TCCC GGAG TTTTTTGCAACGCCG TERM 1277 1781600 - 1781610 + G 76 -6.8 -4.46212 | overlap 1781587 GCCACCCGCGAGGTG TCGC TGG GCGA TTTTGTCCTGACAGG trmD 1781213 - 1781974 + | tRNA (guanine-N(1)-)-methyltransferase CYA_1776 1781965 - 1782318 + | hypothetical protein secE 1782420 - 1782686 + | preprotein translocase subunit SecE nusG 1782770 - 1783441 + | transcription antitermination protein NusG rplK 1783451 - 1783876 + | 50S ribosomal protein L11 rplA 1783976 - 1784686 + | 50S ribosomal protein L1 CYA_1781 1784679 - 1784789 + | hypothetical protein TERM 1278 1784892 - 1784917 + F 88 -13.3 -3.81755 | TTACGCTTGTCTCAA TGCGTCTCGGC TATG GCTGAGGCGCA TTCTCTTTGGCGGCT TERM 1279 1785243 - 1785253 + G 73 -8.2 -3.99324 | TTCCCTTCCTGTCAG GGCC GAC GGCC TTTATCATGATCCGG TERM 1280 1785339 - 1785327 - g 80 -4.7 -4.85545 | opp_overlap 1785331 AGCAAACCAAGAAAA CCGAG TTC CGCGG CGCCGCTGCCGAGGG rplJ 1785005 - 1785568 + | 50S ribosomal protein L10 CYA_1783 1786702 - 1785659 - | hypothetical protein rplL 1785642 - 1786055 + | 50S ribosomal protein L7/L12 TERM 1281 1786151 - 1786172 + gF 100 -13 -4.69664 | opp_overlap 1786145 1786144 AACCAGAACGATGAG GGAGGGGC AAAGCA GCCCCTCC TTTTTCACTGATATG TERM 1282 1787194 - 1787216 + GH 71 -5.7 -4.26188 | gap 1 TGGCACCATTCACTG GGAC-ATCAT CGGC ATGATCGTCC TTTTCGGTGTCTCCA oxaA 1786385 - 1787563 + | putative inner membrane protein translocase component YidC CYA_1786 1787607 - 1788275 + | R3H domain-containing protein CYA_1787 1788361 - 1788864 + | hypothetical protein ubiA 1788917 - 1789828 + | tocopherol phytyltransferase CYA_1789 1790675 - 1789887 - | S4 domain-containing protein CYA_1791 1792973 - 1790928 - | putative hydantoin utilization protein A CYA_1792 1794354 - 1793011 - | hypothetical protein CYA_1793 1795040 - 1794531 - | hypothetical protein CYA_1794 1795619 - 1795065 - | hypothetical protein TERM 1283 1795445 - 1795425 - G 78 -6.7 -4.66833 | opp_overlap 1795424 GTGGAAGCCCAAAAA CCCGTCCAC ACC GTGGTTGGG GTAGTTGTTGTCGGC prc-1 1797021 - 1795708 - | C-terminal processing peptidase TERM 1284 1796361 - 1796348 - G 93 -8.1 -5.03314 | opp_overlap 1796347 GGCAGCTTGAAAAAA CCGGT GCGC ACCGG GTTGATCAGGATGGA petB 1797227 - 1797874 + | cytochrome b6 TERM 1285 1798348 - 1798375 + G 70 -7.6 -3.98256 | gap 1, opp_overlap 1798348 1798347, overlap 1798349 AACAAGTTTCAGAAT CCGCTG-CGCCGC CCC GTGGCGACGACGG TGTTTTTGATCGGCA TERM 1286 1798349 - 1798377 + G 81 -6.6 -4.72272 | gap 1, opp_overlap 1798348 1798347, overlap 1798348 ACAAGTTTCAGAATC CGCTG-CGCCGCC CCGT GGCGACGACGGTG TTTTTGATCGGCACC petD 1797970 - 1798464 + | cytochrome b6-f complex subunit IV TERM 1287 1798494 - 1798521 + F 100 -12 -5.42259 | gap 1, opp_overlap 1798477, overlap 1798499 GCTTGATAACTCTGA GTGCAG-CAGGCC GGT GGCCGGGCTGCAC TTTTTTTGGACGTGG TERM 1288 1798499 - 1798519 + F 75 -12.5 -2.90056 | opp_overlap 1798477, overlap 1798494 ATAACTCTGAGTGCA GCAGGCCGG TGG CCGGGCTGC ACTTTTTTTGGACGT leuB 1798607 - 1799752 + | 3-isopropylmalate dehydrogenase ntcA 1800542 - 1799868 - | nitrogen-responsive regulatory protein TERM 1289 1802362 - 1802345 - g 72 -4 -4.56597 | overlap 1802347 TCCCCCGCTCAAAAA GCCGGC ATCTGG GCTGGC GATGAGTTGGTGGCC CYA_1800 1800809 - 1802608 + | M61 family peptidase CYA_1801 1802690 - 1803814 + | hypothetical protein CYA_1802 1804709 - 1803822 - | hypothetical protein TERM 1290 1804429 - 1804476 + g 78 -3.4 -5.0133 | gap 2 AGGTTGTCGAAGGCG GCCACATGTTCCAGCAGCCGCA CCAGCT TGCGGG-GCA-GAGCCTGTGGC TTTTTTACCGGGATC TERM 1291 1804759 - 1804729 - H 81 -3.4 -5.252 | GATCCTCAGAAAAAA TCT-CGTGATCCAG ATCTA CCGGATC-CGCAGA CCCAGCTCCAGCTTT TERM 1292 1805358 - 1805375 + G 72 -2.7 -4.8048 | gap 1, overlap 1805358 1805359 AAGGCTGTCAGTCCC TCT-TGCC CCA GGCACGGA TTTTTCATGTGGGCC TERM 1293 1805553 - 1805537 - g 78 -3.6 -5.06451 | opp_overlap 1805537 1805543, overlap 1805539 GACGAGCTGAAAAAA CGGGGA GCGGA TCCCAG CTTAGTGAGAATTGT upp 1805069 - 1805722 + | uracil phosphoribosyltransferase CYA_1804 1806029 - 1806937 + | mannosyl-3-phosphoglycerate phosphatase CYA_1805 1807062 - 1807631 + | TPR repeat-containing protein CYA_1806 1807825 - 1808778 + | DnaJ domain-containing protein CYA_1807 1809849 - 1808788 - | hypothetical protein CYA_1808 1810185 - 1810472 + | hypothetical protein CYA_1809 1810515 - 1811885 + | hypothetical protein CYA_1810 1811890 - 1814445 + | hypothetical protein TERM 1294 1815005 - 1815020 + G 77 -2.4 -4.98531 | overlap 1815005 1815007 CTCGGCGCCGGTGGC GGCGGC GACG GCCGTG TTTTTGATTTACCCG TERM 1295 1815007 - 1815018 + G 72 -7.2 -4.11472 | overlap 1815005 1815005 CGGCGCCGGTGGCGG CGGC GACG GCCG TGTTTTTGATTTACC TERM 1296 1815097 - 1815123 + G 73 -6.7 -4.25283 | gap 1, overlap 1815088 GGACGTTCAACTTCA TGTTGGTGTTCC AAGC GGAGCAC-AACA TTTTGATGCACCCGT psbA-3 1814550 - 1815614 + | photosystem II protein D1 TERM 1297 1815649 - 1815670 + F 100 -9.4 -5.66338 | AACAGCATTGGTGGA TCCCCCGG CTTGGT CTGGGGGA TTTTTTGTTCTCTTT ruvB 1815754 - 1816890 + | Holliday junction DNA helicase B CYA_1814 1819907 - 1817211 - | putative phycobilisome 120 kDa linker polypeptide, core TERM 1298 1818943 - 1818975 + g 74 -4.9 -4.66833 | gap 2, opp_overlap 1818954 TCCGATTTGCCCAGG CGGCGAATGAACTCC TTCAT GGAGATC-T-CGCCG TTTTTCACCTTCGAC CYA_1816 1820137 - 1822299 + | TPR repeat-containing protein CYA_1817 1823742 - 1822540 - | major facilitator transporter TERM 1299 1822815 - 1822801 - G 76 -6.4 -4.5287 | CCAAAGCAAGGAAAA GGCTAC CCA ATAGCC CAGAAGGGATCCCTG TERM 1300 1823719 - 1823706 - G 76 -8.1 -4.10744 | CCAGGCAAAGAAGAA CCAGG AGCC CCTGG AGGATAAAAAGCCAT CYA_1818 1824095 - 1823895 - | NifT/FixU family protein nifZ 1824355 - 1824092 - | NifZ protein aksA 1825678 - 1824491 - | trans-homoaconitate synthase TERM 1301 1824625 - 1824641 + g 72 -7.9 -4.19238 | overlap 1824611 GGGTGACGTGCTGCC GCACCTG TTC CAGGAGC TTTTCCAGTTGGCCA CYA_1822 1825837 - 1825938 + | hypothetical protein nifK 1827462 - 1825927 - | nitrogenase molybdenum-iron protein beta chain nifD 1828991 - 1827528 - | nitrogenase molybdenum-iron protein alpha chain TERM 1302 1829077 - 1829045 - R 80 -14.8 -2.53382 | opp_overlap 1829045 1829043 ACTAGGGGGAACCGA GGGCCGAGGGAGGA AGGGA TCCACCCCCAGCCC ATCTTTAAGTTCACA nifH 1829966 - 1829088 - | nitrogenase iron protein nifU 1831182 - 1830244 - | Fe-S cluster assembly protein NifU nifS 1832429 - 1831239 - | cysteine desulfurase CYA_1827 1832771 - 1832478 - | ferredoxin, 4Fe-4S nifB 1834233 - 1832797 - | nitrogenase cofactor biosynthesis protein NifB TERM 1303 1833109 - 1833091 - G 72 -2.3 -4.8048 | CTCGTAGATCAAAAA CTCCCGC GCATG GCCGAAG TGGCGATTGACCAGG CYA_1829 1834505 - 1834386 - | hypothetical protein TERM 1304 1834549 - 1834564 + H 86 -10.4 -4.21275 | opp_overlap 1834545, overlap 1834547 1834561 GATGCACTCAAGCGC CGCAGC CTCG GCTGCG TTTTGCATCAATTGC CYA_1830 1835005 - 1835298 + | hypothetical protein dpsA 1835353 - 1835898 + | nutrient-stress induced DNA binding protein CYA_1832 1835941 - 1836165 + | hypothetical protein CYA_1833 1836169 - 1836528 + | Mo-dependent nitrogenase family protein TERM 1305 1837620 - 1837605 - g 79 -8.2 -4.34866 | opp_overlap 1837605 ACCGAAGAAGACAAA GCCCGC ATCC GCGAGC TGCTTGGCCAGGATG nifE 1836519 - 1837925 + | nitrogenase MoFe cofactor biosynthesis protein NifE nifN 1837913 - 1839250 + | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN nifX 1839325 - 1839744 + | nitrogenase cofactor biosynthesis protein NifX CYA_1837 1839747 - 1840202 + | hypothetical protein TERM 1306 1840208 - 1840227 + F 95 -2.8 -5.80727 | gap 1 CCGACTGTAGCCGCT TGTCT-CCG TCC CGGCAGCCA TTTTTTCTTCTTTTT CYA_1838 1840269 - 1840532 + | hypothetical protein nifW 1840529 - 1840894 + | nitrogenase stabilizing/protective protein nifW CYA_1840 1840937 - 1841236 + | ferredoxin, 2Fe-2S CYA_1841 1841265 - 1841642 + | FeoA domain-containing protein CYA_1842 1841737 - 1841994 + | hypothetical protein TERM 1307 1842214 - 1842198 - f 70 -9.5 -3.4582 | opp_overlap 1842200, overlap 1842196 TGAGCTTAGGAAACA GACCTTA AAC TAAGGTC TCTCGCCGGGCTGCC CYA_1843 1842337 - 1843989 + | transcriptional regulator PatB CYA_1844 1844227 - 1844018 - | molybdenum-pterin binding domain-containing protein modA 1844477 - 1845244 + | molybdate ABC transporter, molybdate-binding protein modB 1845268 - 1847055 + | molybdate ABC transporter, permease protein cbiG/cobJ-2 1848795 - 1847074 - | cbiG protein/precorrin-3B C17-methyltransferase TERM 1308 1847371 - 1847382 + g 72 -7.2 -4.14739 | opp_overlap 1847358 1847357 1847359, overlap 1847363 ATCGGCAGCTGCAGC CGCC TGCA GGCG TTTTGCAATCACTGG CYA_1848 1849177 - 1850049 + | hypothetical protein TERM 1309 1850609 - 1850624 + G 77 -2.4 -4.98531 | overlap 1850609 1850611 CTCGGCGCCGGTGGC GGCGGC GACG GCCGTG TTTTTGATTTACCCG TERM 1310 1850611 - 1850622 + G 72 -7.2 -4.11472 | overlap 1850609 1850609 CGGCGCCGGTGGCGG CGGC GACG GCCG TGTTTTTGATTTACC TERM 1311 1850701 - 1850727 + G 73 -6.7 -4.25283 | gap 1, overlap 1850692 GGACGTTCAACTTCA TGTTGGTGTTCC AAGC GGAGCAC-AACA TTTTGATGCACCCGT psbA-4 1850154 - 1851218 + | photosystem II protein D1 TERM 1312 1851254 - 1851275 + F 95 -7.9 -5.55769 | overlap 1851255 CCAGTCCTTCTTGAA TCCCCTGGC AGAC GCTGGGGGG TTTTTTCTTCTACCG TERM 1313 1851255 - 1851274 + F 73 -9.2 -3.92377 | overlap 1851254 CAGTCCTTCTTGAAT CCCCTGGC AGAC GCTGGGGG GTTTTTTCTTCTACC TERM 1314 1851701 - 1851687 - g 76 -9.2 -4.07568 | overlap 1851690 CTGGCTTGGGCAAAA CCACGG TGG CCGCGG TGCTGGCGGCGGAGA ruvB 1851392 - 1852504 + | Holliday junction DNA helicase B CYA_1851 1855241 - 1852542 - | putative phycobilisome 120 kDa linker polypeptide, core TERM 1315 1855777 - 1855793 + G 71 -10.8 -3.48593 | opp_overlap 1855770 1855768 1855771 GGGAAAGAGGCCACT GGCCGC AGGCG GCGGCC TTGTATCGGCAACTG TERM 1316 1856598 - 1856585 - g 73 -8.1 -4.09685 | TGCCATTGGGCAAAA GCTGC GCTC GCAGC GGATCCCCTTGGCCG TERM 1317 1857265 - 1857275 + G 71 -8.2 -3.95073 | overlap 1857264 TGCTGGAGGCCTTGC GCCC CTG GGGC TTTGTGCCTGTGCAA CYA_1852 1855686 - 1857611 + | TPR repeat-containing protein CYA_1854 1859988 - 1857739 - | TPR repeat-containing protein TERM 1318 1859030 - 1859020 - G 74 -4.6 -4.62336 | overlap 1859025 ACTTGACCCTAAAAA GGCA AGC CGCC GCTGCTCTGGGGTGT CYA_1856 1860049 - 1860273 + | hypothetical protein CYA_1855 1861091 - 1860270 - | metal chelate ABC transporter, metal chelate-binding protein crtH 1862810 - 1861251 - | carotenoid isomerase TERM 1319 1861521 - 1861553 + g 100 -14.1 -4.72986 | AGGCCAGAGGGCCTC CAGGCGGCGGATGAG ACG CTCGGCTGCCGCTTG TTTTTGCTGCCGGTA potB 1863845 - 1862898 - | spermidine/putrescine ABC transporter, permease protein potA 1864972 - 1863839 - | spermidine/putrescine ABC transporter, ATP-binding protein CYA_1860 1865843 - 1865040 - | hypothetical protein TERM 1320 1865665 - 1865643 - GH 74 -11.3 -3.33261 | gap 1, overlap 1865644 CTCCAAGGCCGACAA GCGCGGCTCC ACCT GGAGCC-CGC GGCTGTACGATTCCA CYA_1861 1865824 - 1865940 + | hypothetical protein TERM 1321 1866495 - 1866482 - g 77 -3.7 -4.8543 | CAAGCGGGAGAAAAA CGGCG AGAT CTCCG AAGACGAGTCCAAAA frr 1866057 - 1866605 + | ribosome recycling factor TERM 1322 1868537 - 1868563 + G 72 -4.2 -4.56597 | overlap 1868536 1868507 1868539 GCTTTGCGCCTCAAC GGCCCGCAGCGG GGG CAGTTGCTGGAC TTTTTCGGCGGGCAA CYA_1863 1866701 - 1869412 + | polyA polymerase family protein TERM 1323 1869905 - 1869917 + G 80 -4.8 -4.90778 | ACATCAACGCCTTTG CCAC GATGG GTGG TTTTGTTTACATCAC CYA_1864 1869502 - 1870437 + | M48B family peptidase aroB 1871350 - 1872561 + | 3-dehydroquinate synthase TERM 1324 1873073 - 1873098 + G 70 -11.7 -3.16676 | opp_overlap 1873061, overlap 1873071 AACCCGCGCCTACCT CCAGGGGCAGC CGTT GCAGCCCCAGG TGTTCCCTTACTCCA asd 1872540 - 1873547 + | aspartate-semialdehyde dehydrogenase CYA_1868 1873582 - 1873776 + | hypothetical protein TERM 1325 1874067 - 1874056 - f 71 -4.4 -4.5442 | CTTGTAAGCACAAAA TCTG GCAA CAGA AGCTAATTTTTAGAA TERM 1326 1874628 - 1874662 + G 76 -5.7 -4.56597 | gap 1 GGTGGCGGGCCTGTT GTTGG-GGGCGATCTT TCTG GAGAGTGCCCACCAGC TTTTTCCCCACGAGC CYA_1869 1874380 - 1875156 + | zinc/iron ABC transporter permease est 1875186 - 1875968 + | carboxylesterase CYA_1870 1876707 - 1875934 - | hypothetical protein CYA_1872 1876803 - 1877120 + | hypothetical protein CYA_1873 1877125 - 1877265 + | hypothetical protein murB 1879004 - 1878066 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 1880533 - 1879001 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1327 1879565 - 1879550 - G 70 -10.4 -3.54424 | CTGCACCCCTCGAAA CTCGGC CAGA GCCGAG GCAATCACCGCAAAC TERM 1328 1879858 - 1879895 + g 77 -15.7 -2.64933 | gap 1, opp_overlap 1879857 1879856 CATACTGCTGAAAGG CCCGGATCACCTGCTCCA GAT TGGCGTAG-TGATCCGGG TGGTCTAGCTCAATG CYA_1877 1880798 - 1881943 + | membrane fusion protein family protein TERM 1329 1883097 - 1883129 + G 74 -5.4 -4.54477 | gap 1, overlap 1883096 CGGGGGCCATTGCCG TG-CGGCGGCTGCGG GCAG CCGATCCCGCCGACA TTTTCTAAGTTTTGG devC 1881953 - 1883137 + | glycolipid ABC exporter (DevE) family permease protein devA 1883316 - 1884053 + | glycolipid ABC exporter (DevE) family ATP-binding protein CYA_1879 1885003 - 1884050 - | NAD-dependent epimerase/dehydratase family protein TERM 1330 1884391 - 1884356 - G 74 -2.5 -4.82901 | gap 1, opp_overlap 1884356, overlap 1884357 TTCGGCGTAGAAAAA CTCGCGG-GTGGGG CTGCCATCT CCCCACACCTCGAC GTAGTTCTGGCCCCG alaS 1887720 - 1885069 - | alanyl-tRNA synthetase TERM 1331 1886418 - 1886442 + g 80 -5.6 -4.74453 | gap 1, overlap 1886420 CGTCGAGGGTTTGGT GGGCGGC-GCG GGCC CGCTGCCGCTG TTTTTCCATCTCTTG TERM 1332 1886420 - 1886440 + g 78 -10.4 -3.97602 | gap 1, overlap 1886418 TCGAGGGTTTGGTGG GCGGC-GCG GGCC CGCTGCCGC TGTTTTTCCATCTCT TERM 1333 1887699 - 1887683 - G 74 -5.8 -4.52803 | gap 1 TAGAAATCCAGAAAA GCCTGCC GGAT GGC-GGC ACCGGAGAAGGATGG TERM 1334 1888401 - 1888413 + G 74 -4.7 -4.56597 | TTGCCCAGGAGATGC GGCGC AAC GGGCC TTTTTCCGAAGAACA TERM 1335 1889428 - 1889443 + G 72 -2.4 -4.77438 | overlap 1889429 GGGAGGGCTCTTGGG AGCCGG GAGC CTGGCG TTTTTGCTCGTCCAT CYA_1882 1888007 - 1889680 + | serine/threonine protein kinase CYA_1883 1890190 - 1889699 - | hypothetical protein TERM 1336 1890670 - 1890712 + G 81 -7.8 -4.4078 | gap 3 TCCGACGAGCTAATC CGCT-CCCTGCTCATCGCCAC CTGT GTGG-GC-GAGCGGGGCAGCG TTTTGGTTGCAGAGC hisC 1890397 - 1891458 + | histidinol-phosphate aminotransferase CYA_1886 1895570 - 1891482 - | hypothetical protein CYA_1887 1895994 - 1895866 - | hypothetical protein CYA_1888 1896114 - 1896587 + | small heat shock protein (HSP20) family protein CYA_1889 1897416 - 1896634 - | hypothetical protein TERM 1337 1897504 - 1897481 - R 70 -11 -3.04461 | CATTTACGCTGAACA CTGCTGAGCA TTAC TGCTCAGCGG TGAAGCGATAGCATT CYA_1890 1898749 - 1897469 - | ISSoc2, transposase TERM 1338 1897627 - 1897605 - GR 72 -9.8 -3.55444 | overlap 1897618 1897621 GCGGTATCCCGCAAA GCCCTGAGCA TAA CACCCAGGGC GCCTTGCCAATCTCG CYA_1891 1899197 - 1898604 - | ISSoc2, resolvase CYA_1892 1900046 - 1899291 - | DNA-binding response regulator RpaA CYA_1893 1901972 - 1900194 - | peptide/nickel/opine uptake ABC transporter ATP-binding protein TERM 1339 1900618 - 1900632 + g 83 -12.8 -3.87815 | CGTTGGGCTCGTGCT CGCCGC TCG GCGGCG TTTCTCCCCATCCCG CYA_1894 1903463 - 1902123 - | hypothetical protein TERM 1340 1902189 - 1902174 - G 78 -6.8 -4.57569 | GTAGCCGTGCAAAAA GGTGGA TCCC CCCACC GGGCCGATCTCGCCG TERM 1341 1902228 - 1902216 - G 100 -4.7 -5.40072 | overlap 1902217 GCCGTTGCAAAAAAA GCCCC CCA GGGGT AGCTCTCCCAGCAAT TERM 1342 1902227 - 1902217 - G 71 -8.2 -3.83561 | overlap 1902216 CCGTTGCAAAAAAAG CCCC CCA GGGG TAGCTCTCCCAGCAA CYA_1895 1905149 - 1903557 - | M23B family peptidase TERM 1343 1905040 - 1905026 - G 70 -7.8 -4.06491 | TTAAGCTGAGAGAAA GGGCTA AGC CAGCCC ACCGGAGTCTTGACG TERM 1344 1906310 - 1906323 + G 72 -4.5 -4.56597 | CGACATTCACGCTGG TGGGG CAGA CCTCA TTTTTCCCCACCACG TERM 1345 1906635 - 1906596 - g 72 -4.1 -4.59109 | opp_overlap 1906604 GAGACTCTCCAAAAA GGGATCCACTGCGCCCA GCAGTT TGGCCAAGGGGGATCCC CCGATTCCGAGGCGA cysS 1905549 - 1907069 + | cysteinyl-tRNA synthetase CYA_1897 1908622 - 1907093 - | S10 family peptidase TERM 1346 1907457 - 1907484 + g 70 -12 -3.13403 | gap 1, overlap 1907455 TAGGTCAGCTCCGTG TCCACCTGCAGGG TCT CCC-GCAGGTGGC TGTTGATGGCGGCAG TERM 1347 1908183 - 1908193 + g 72 -2.4 -4.7254 | TGGGTGGGCTTGGCC GCCG GAT CGGA TTTTTCCTGAGAACT CYA_1898 1909300 - 1908707 - | hypothetical protein TERM 1348 1909017 - 1909007 - G 76 -8.2 -4.16016 | opp_overlap 1909009 1909010 1909014, overlap 1909008 GGAGGTGGCAACAAA GCGG GAT CCGC CCGGTGCCGGTTCCA TERM 1349 1909061 - 1909045 - G 74 -5 -4.57569 | overlap 1909046 1909047 CCATTTGCCCAAAAA CGCGGC TGCCC GCCGGG ATCACCAAACGCCCC TERM 1350 1909337 - 1909358 + r 79 -9.3 -4.208 | overlap 1909334 AAGTTCTGCACGTGC CCGCGGCCT TTTC GGGCCGAGG TTTGTCCTTTTGCGG thiL 1910519 - 1909497 - | thiamine monophosphate kinase kaiC 1912207 - 1910603 - | circadian clock protein KaiC TERM 1351 1911382 - 1911326 - G 83 -7.2 -4.57569 | gap 1, opp_overlap 1911372, overlap 1911314 1911327 1911368 CGAGTCTTTGAAAAA GCCACCGCCGCACATCTCGTCCAGCTT CTCG ATGCCGGAAGAGACGCGCA-CGTTGGA AGAGCGCTGCGTCAG kaiB 1912535 - 1912233 - | circadian clock protein KaiB kaiA 1913453 - 1912539 - | circadian clock protein KaiA TERM 1352 1913180 - 1913163 - G 80 -4.8 -4.82901 | GTTGTGGTAGAAAAA CCGCTC CCGCTT GAGCAG AGCTCTCGCCCCCGG TERM 1353 1913475 - 1913458 - H 71 -6.9 -4.30719 | TCTGGCGACAACAAA GCCTCTG CCGC CAGCGGC TCTCCAGCAGGCGGC TERM 1354 1913838 - 1913822 - g 85 -5.7 -5.00616 | overlap 1913825 TCTCTGTGGAAAAAA CCAGCCG CAA CGCCCGG CAGATCTGCGAGCTG CYA_1903 1913692 - 1914624 + | inosine-uridine preferring nucleoside hydrolase family protein TERM 1355 1914801 - 1914823 + F 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC pgsA 1914936 - 1915523 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ruvC 1915477 - 1916058 + | crossover junction endodeoxyribonuclease RuvC CYA_1906 1916125 - 1916772 + | ATP-dependent protease La TERM 1356 1917002 - 1917020 + G 84 -3.8 -5.1287 | overlap 1917003 ACCCGCTCATCTGCC TGCCCA CCAGCAA TGGGCG TTTTTTCGATCTGGA CYA_1907 1916902 - 1917633 + | hypothetical protein CYA_1908 1917679 - 1918737 + | hypothetical protein TERM 1357 1918991 - 1919005 + G 85 -5.6 -5.0538 | GCAAGCGCTGCAGAC GGAGCG CAC CTCTCC TTTTTTGGAGTACGA TERM 1358 1919566 - 1919539 - g 77 -2.6 -5.08824 | overlap 1919540 1919555 CCGCCATGGAAAAAA GCGGCATAGAAC TCAA GATCTACACCGG AGAGGAGATCACGCC CYA_1909 1918914 - 1920101 + | hypothetical protein CYA_1910 1920781 - 1920107 - | response regulator CYA_1911 1920942 - 1921688 + | S54 family peptidase TERM 1359 1921686 - 1921702 + F 76 -3.7 -4.96848 | overlap 1921687 GACAGGGACCTGTTC TGATTGA ACC TCAATCC TTTTTGTGTCAGAGA CYA_1912 1921739 - 1922380 + | hypothetical protein TERM 1360 1922399 - 1922388 - T 91 -7.2 -5.28176 | CCCAGTGAGAAAAAA GCCG AGAC CGGC TGGACCAGTGGCACG CYA_1913 1923016 - 1922540 - | ISSoc3, orfA transposase TERM 1361 1923379 - 1923347 - R 89 -8.5 -5.00616 | gap 1, opp_overlap 1923346 CCCCGCTTCAAAAAA GCGGGGGAGT-TGA GATCCT TCACATTCCCCCGC ATCAATTGCCCCAAG CYA_1915 1925897 - 1924290 - | NAD(P)H-quinone oxidoreductase subunit 4 TERM 1362 1925520 - 1925508 - G 82 -3.3 -5.20781 | CATCAGAAAATAAAA CAGGC GCG GCTTG AGGGTGACCGGCCAG CYA_1916 1926267 - 1927301 + | putative adenosine deaminase ybbB 1928427 - 1927378 - | tRNA 2-selenouridine synthase TERM 1363 1927934 - 1927964 + g 76 -8.2 -4.11216 | TCGAGGACTTGGGCT CCCCGCTGCTGC AGATGGC GCAGCAACTGGG TTTTGCCGCTCCCCG CYA_1918 1928619 - 1929314 + | isochorismatase family protein CYA_1919 1929459 - 1930910 + | carbohydrate ABC transporter ATP-binding protein CYA_1920 1931726 - 1930962 - | urea ABC transporter, ATP-binding protein CYA_1921 1932528 - 1931761 - | urea ABC transporter, ATP-binding protein TERM 1364 1932190 - 1932177 - G 81 -3.8 -5.02476 | opp_overlap 1932165, overlap 1932165 ATAGGGTGGAAAAAA CCCT TTTGTC AGGG TTGAGGGATAGCTCC CYA_1922 1933907 - 1932699 - | urea ABC transporter, permease protein TERM 1365 1933043 - 1933021 - G 71 -5.4 -4.50159 | TGCAAGGTAAACAAA GCTCCGGCAA CAC CCGCCAGGGC AGCAGACACGGCAAA TERM 1366 1933113 - 1933099 - G 83 -7.8 -4.59773 | opp_overlap 1933099 TCGTAGCCGGAAAAA CGAACC CGC GGCTCG TCATCTCGAATGGCT CYA_1923 1935068 - 1933911 - | urea ABC transporter, permease protein TERM 1367 1934805 - 1934790 - G 81 -3.9 -4.96848 | TCGGCCATACAAAAA GCGGA TCACCC CCCGC TCCAGGGCTAGTCCC CYA_1924 1936447 - 1935173 - | urea ABC transporter, urea-binding protein TERM 1368 1937016 - 1937044 + G 79 -9.6 -4.13767 | gap 2, overlap 1937016 CGGCAAGCTGCCGGT GGGG-CGGTG-CAG GAG CTGACGCCGGCCCC TTTTAACGTGCGCAC TERM 1369 1938085 - 1938064 - g 76 -9.3 -4.07568 | CCCTGCTGGTGAAAA GCCACGGCG GGCC CACCGGGGC GACGGCAGCCGTGCT TERM 1370 1938678 - 1938693 + G 74 -4.6 -4.55295 | GCCAACCTCAAACGG GCCCTG GAGG CAGAGC TTTATTTCTACGCCC CYA_1925 1936845 - 1938779 + | S9C family peptidase TERM 1371 1939086 - 1939039 - g 76 -10.5 -3.85698 | gap 1 TTGCGCGCCTACAAA GCCCTGCAGGCCGGCCAAGCGC AAGCG GCCCTGGAGCA-CCTGCAGGGC TTGGAAGAAAAGCTG TERM 1372 1939129 - 1939098 - g 91 -9.4 -4.63218 | opp_overlap 1939088 GGGCTTGGAAGAAAA GCTGCCAGTTCTCA CCGA CGAGATCTGGAAGC TCAGGGCTCAGGCTT TERM 1373 1940660 - 1940648 - g 78 -3.3 -5.02074 | GGATTGCCCAAAAAA TCGGC CTA GCCCA GTACAGCCTCACCAA CYA_1926 1938847 - 1940973 + | Slt family transglycosylase CYA_1927 1941491 - 1941213 - | hypothetical protein CYA_1929 1941566 - 1942258 + | DnaJ domain-containing protein CYA_1928 1943112 - 1942255 - | S49 family peptidase TERM 1374 1942399 - 1942413 + g 70 -10 -3.62775 | opp_overlap 1942392 AGTAGAAATGGGCAG GCCCAA CCT TTGGGC TTCTTCGGCGGTGAT CYA_1930 1944007 - 1943183 - | hypothetical protein TERM 1375 1943228 - 1943213 - G 77 -2.4 -5.02476 | AGACGCCGCAAAAAA GCGATC CAAG GCCCGC AGCAAATCCGGTACA CYA_1931 1945040 - 1944066 - | fatty acid desaturase TERM 1376 1944611 - 1944600 - G 77 -2.2 -5.06414 | CCGCTTGAAGAAAAA CACC TCAT GGTA GAAAAAGCGCGGCGC TERM 1377 1944646 - 1944618 - G 74 -2.2 -4.85599 | overlap 1944620 1944632 CTCATGGTAGAAAAA GCGCGGCGCAAT TAGCC ACAGCGGCCCGC CCGTAGACACATAGT TERM 1378 1944752 - 1944738 - G 84 -11.4 -4.13246 | overlap 1944749 GACCGGATAGACAAA GCCCTG TAA CAGGGC AGAGCCATGGCCCAG psaK 1945381 - 1945626 + | photosystem I reaction center protein PsaK psbK 1945752 - 1945889 + | photosystem II reaction center protein K CYA_1934 1946593 - 1946054 - | hypothetical protein CYA_1935 1947118 - 1946705 - | hypothetical protein chlI 1947458 - 1948516 + | magnesium chelatase, ATPase subunit I CYA_1937 1948622 - 1949239 + | ISSoc2, resolvase TERM 1379 1950339 - 1950362 + GT 70 -11 -3.04461 | AATGCTATCGCTTCA CCGCTGAGCA GTAA TGCTCAGCAG TGTTCAGCGTAAATG CYA_1938 1949094 - 1950374 + | ISSoc2, transposase CYA_1939 1951052 - 1950384 - | hypothetical protein TERM 1380 1950727 - 1950761 + g 72 -2.1 -4.70659 | overlap 1950722 CGGGCGGCGGTGGTG CT-GAGCAGGGTGTGGG AAG CCCAGGCCA-GCTCCAG TTTTTCCCTCTCGGA CYA_1940 1951634 - 1951110 - | thermonuclease CYA_1941 1952932 - 1951778 - | hypothetical protein icc 1953891 - 1953067 - | putative 3'',5''-cyclic-nucleotide phosphodiesterase TERM 1381 1953358 - 1953330 - G 95 -15.3 -4.09739 | CGAACTCGTCCAAAA CCTGAAACAGCCG CTC CGGCTGCTGCAGG GCACTCTGATCCAGC TERM 1382 1953554 - 1953532 - G 74 -2.7 -4.87892 | GTTCAACAAAATAAA GCTCCAG TTCTCTCGG CTGAAGC TTTTCTCCCGGTGTA psbP 1954609 - 1954079 - | photosystem II oxygen evolving complex protein PsbP CYA_1944 1957040 - 1954758 - | RelA/SpoT family protein rbgA 1958108 - 1957239 - | ribosomal biogenesis GTPase CYA_1946 1958288 - 1958773 + | iron-sulfur cluster-binding protein CYA_1947 1958780 - 1960201 + | carbohydrate kinase TERM 1383 1960183 - 1960205 + T 100 -9.8 -5.34857 | AGGGAGAGCCGCTAA CCCGCTACTC ACT GGGTAGCAGG TTTTCTTTTGTTTCC CYA_1948 1962242 - 1960584 - | hypothetical protein TERM 1384 1961130 - 1961114 - G 73 -6.5 -4.37886 | GGATCTCGGAGAAAA GCTGGCT AAA ATCCAGC TCGGCCACAGTTAGG TERM 1385 1962320 - 1962289 - R 76 -3.6 -4.8543 | gap 1, overlap 1962290 1962291 GAAGGCTTAGAAAAA GGGCACGGGAGCCAC CCG GCGGGTTCCAT-CCC AGCCGCTGGCTAGCC CYA_1949 1962861 - 1962280 - | AhpC/TSA family protein TERM 1386 1962855 - 1962866 + g 84 -2.2 -5.25805 | ACAGGCTGCTGTTGC TGGT CATT GCCA TTTTTTACGTTTCTT CYA_1950 1963336 - 1962899 - | hypothetical protein TERM 1387 1963191 - 1963181 - G 72 -2.4 -4.72986 | overlap 1963183 CAGGCGCAGGAAAAA GCGG TAG CGGC TGCCCAGTTGCCCAG CYA_1951 1963903 - 1963340 - | putative lipoprotein CYA_1953 1965027 - 1964218 - | RNA methyltransferase TERM 1388 1964465 - 1964447 - G 83 -5.2 -5.00884 | AGGTGGCCGAAAAAA CCCTCCAG CAG CTCGAAGG GAGCCGGCTTTGAGA TERM 1389 1965242 - 1965252 + G 76 -6.8 -4.52589 | TCGTTCGCGATAGCG GTGC GGA GCAC TTTTCTCTGGCCGAG TERM 1390 1965510 - 1965522 + G 85 -3.3 -5.27335 | GGGGGAAGAGGTTTC CGATG TCT CCTCG TTTTTCTTTGAGGGA CYA_1954 1965094 - 1965669 + | putative lipoprotein lpxC 1965676 - 1966587 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 1391 1966668 - 1966683 + F 79 -11.8 -3.68351 | TGCTTTGGGTTCAAT GCCCGC CCAT GCGGGC TTTAGCTAATCCGCC TERM 1392 1967707 - 1967684 - g 74 -6 -4.4648 | overlap 1967685 ATTTTCACCACAAAA CTGCCCGCAA ACTT TTGCAGACAA GAAAGCACATAGCCC CYA_1956 1966855 - 1968081 + | ISSoc5, transposase fabZ 1968161 - 1968661 + | (3R)-hydroxymyristoyl-ACP dehydratase CYA_1958 1969306 - 1968830 - | ISSoc3, orfA transposase TERM 1393 1969669 - 1969637 - gH 93 -8.5 -5.00616 | gap 1, opp_overlap 1969636 CCCCGCTTCAAAAAA GCGGGGGAGT-TGA GATCCT TCACATTCCCCCGC ATCAATTGCCCCAAG TERM 1394 1970504 - 1970483 - gH 70 -10.9 -3.27298 | overlap 1970484 CCGTTGAAGCAGCAA CTCCGGGAA GTGA TTCCCGGAA GCTCCCGTCTACAGC TERM 1395 1970503 - 1970484 - gH 70 -12.2 -2.56164 | overlap 1970483 CGTTGAAGCAGCAAC TCCGGGAA GTGA TTCCCGGA AGCTCCCGTCTACAG CYA_1959 1969262 - 1970533 + | ISSoc3, orfB transposase TERM 1396 1971470 - 1971458 - g 76 -5.5 -4.56597 | overlap 1971459 TTGCCCCTGGAAAAA GCGCT GCA AACGC TGCGGGAGAGTCTGC lpxA 1970741 - 1971652 + | UDP-N-acetylglucosamine acyltransferase lpxB 1971649 - 1972839 + | lipid-A-disaccharide synthase CYA_1962 1973888 - 1972842 - | hypothetical protein CYA_1963 1974942 - 1973893 - | mandelate racemase/muconate lactonizing enzyme family protein TERM 1397 1974589 - 1974554 - G 70 -10.5 -3.60971 | ATGCCAATGGTCAAA GTGGTGGGCGGGAT-GC GGGA GCGATCCAGCCC-CCAC AACTGCCACAGGGGC CYA_1964 1975121 - 1976758 + | acetolactate synthase CYA_1965 1976915 - 1978981 + | type IV pilus assembly protein PilB pilT-1 1979154 - 1980284 + | twitching motility protein TERM 1398 1980538 - 1980550 + G 76 -6.2 -4.56597 | GCGCGTGCACGGCTG CGCC GAGAG GGCG TTTTTGCCAAGCCAG TERM 1399 1980947 - 1980997 + G 72 -3.9 -4.64676 | gap 1, opp_overlap 1980947 1980951 GCCTGCAGAAGCAGA TCAAGTCAGCCATGACCTAC-CCG GTGG TGGTGACGATCTTGGCTGTCTTGA TTTTCTTGGGCATGG pilC 1980445 - 1981671 + | type IV pilus assembly protein PilC TERM 1400 1984054 - 1984083 + G 74 -4.8 -4.59773 | CTGTACCAGAACGAG GCGCTGCTGCGG GTCTCG CCGCTGGATCGC TTTTTGCAGGTGGAG CYA_1968 1981723 - 1986432 + | alpha-2-macroglobulin family protein TERM 1401 1986569 - 1986554 - g 76 -7.5 -4.25104 | TTTTCCCGACCAAAA GCCGG GCACCT CCGGC CTGCGCAAGCCGGTG TERM 1402 1987537 - 1987550 + G 77 -2.3 -5.0133 | CTTGCTACGAGACGC CTACC GGCT GGAAG TTTTTTGGCAACCTC TERM 1403 1987655 - 1987638 - g 78 -6.9 -4.59109 | opp_overlap 1987638 1987637 1987635 1987640 CACATCCGGGAAAAA GACGGCC TCTG GGCTGTC CTCTTTTGGCTCAAC TERM 1404 1987976 - 1988000 + G 72 -13.5 -2.7186 | overlap 1987978 CCTTTCCGGCACCGG CACCCACGGGG CCA CCCTGCGGGTG TACTTGGAGCGGTTT CYA_1969 1986510 - 1988141 + | phosphoglucomutase TERM 1405 1988227 - 1988265 + F 82 -2.3 -5.4492 | CGAGAGTGGCGGTAG GATGAGGAGGTGGGG ACCCTTCCA CAACGCCTCCACATC TTTTTTCTGTCTGTG CYA_1971 1988278 - 1989189 + | alpha/beta fold family hydrolase CYA_1970 1989647 - 1989186 - | hypothetical protein TERM 1406 1989378 - 1989389 + g 78 -3.6 -5.09173 | overlap 1989388 AAGACGGGGAAAGAG GCGG ACGG CTGC TTTTTTGAGCTCTTC CYA_1973 1992536 - 1989936 - | glycosy hydrolase family protein TERM 1407 1991923 - 1991913 - G 73 -8.2 -4.06384 | TGCCAAGATGACAAA GCGG ATC CCGC AGTCGACCAAGGCCT TERM 1408 1992481 - 1992468 - G 75 -3.8 -4.68994 | AGCATCAGCTAAAAA GGGA GCCGGA TCCC CTTGCCCTGATTCGG folD 1993736 - 1992867 - | FolD bifunctional protein xseB 1994074 - 1993838 - | exodeoxyribonuclease VII, small subunit xseA 1995290 - 1994055 - | exodeoxyribonuclease VII large subunit TERM 1409 1995566 - 1995548 - g 78 -3 -5.09762 | overlap 1995549 1995550 GGTGAAGAAAGAAAA TCCCTGGT ACT ACCAGGTC TCCAAATGCGCTCCT TERM 1410 1996162 - 1996196 + G 79 -9.3 -4.17089 | opp_overlap 1996151 1996163, overlap 1996163 AGAACCTGCTTAAGA ACCACAAGCTGGCAG GAGCG CTGTCAGATTGTGGC TTTTACGAGTTTCGG TERM 1411 1996195 - 1996163 - g 70 -10.6 -3.62522 | opp_overlap 1996163 1996162, overlap 1996151 GAACCTGCTTAAGAA CCACAAGCTGGCAG GAGCG CTGTCAGATTGTGG CTTTTACGAGTTTCG TERM 1412 1996163 - 1996195 + G 71 -12.8 -3.09772 | opp_overlap 1996151 1996163, overlap 1996162 GAACCTGCTTAAGAA CCACAAGCTGGCAG GAGCG CTGTCAGATTGTGG CTTTTACGAGTTTCG CYA_1977 1995330 - 1996559 + | ISSoc7, transposase TERM 1413 1996766 - 1996813 + G 71 -11.2 -3.45571 | overlap 1996761 1996768 CTGGGGCTGGCAGCA TTGCTGGGTTTGCTGGTTCTGC TCTG GCAGATCCGGCAGATCCTGCTG TTGGTGTTTGCGGCC TERM 1414 1996768 - 1996811 + G 88 -16 -3.29837 | overlap 1996766 1996761 GGGGCTGGCAGCATT GCTGGGTTTGCTGGTTCTGC TCTG GCAGATCCGGCAGATCCTGC TGTTGGTGTTTGCGG TERM 1415 1997128 - 1997146 + G 77 -3.7 -4.84359 | overlap 1997106 CCAGGCCACCGAGTT GGTGCGC CAGGT GCGCGAC TTTTTCTCCGAGTCC TERM 1416 1997635 - 1997653 + G 81 -4.4 -5.07486 | overlap 1997628 CGCCCTAACTTTGGT GGCCCAAG TTA CCTCGGCC TTTTTCTTCGGCGTG CYA_1978 1996733 - 1997869 + | hypothetical protein CYA_1979 1997989 - 1998363 + | hypothetical protein CYA_1980 1998386 - 1999501 + | pentapeptide repeat-containing protein TERM 1417 2000650 - 2000635 - g 71 -6 -4.25104 | overlap 2000636 GCTCTTCGACGAAAA CGGCCG CCTG CGGCCC GAGCTGCAGGAGCTG TERM 1418 2000694 - 2000683 - g 72 -7.2 -4.24002 | CCCCAAAGGGGAAAA GCGC ATGG GCGC CACCCCCTATGCCAA TERM 1419 2001039 - 2001049 + G 90 -8.2 -4.93296 | GCTACCTGTTGACAG GCCG CCA CGGC TTTTTCTCCTGCTAC CYA_1981 1999601 - 2001976 + | putative phosphoketolase TERM 1420 2002140 - 2002159 + F 75 -11.4 -3.44622 | TGGAAGAGGCGGACT GGGGAGGG ATGG CCCTCTCC TTAGTTCTCGGCCTG TERM 1421 2002647 - 2002657 + G 76 -8.2 -4.12254 | TGGGCTGGCTGTTCT GGCC CTT GGCC TTGTTTGTGCTGGTG TERM 1422 2002706 - 2002684 - g 74 -9.8 -3.71848 | opp_overlap 2002684, overlap 2002685 GGTGGGCACCAACAA CGCCGTCAAC CTC GCCGACGGCA TGGACGGCCTGGCGG mraY 2002148 - 2003170 + | phospho-N-acetylmuramoyl-pentapeptide-transferase CYA_1984 2004384 - 2003653 - | hypothetical protein CYA_1985 2005065 - 2004448 - | pyridoxamine 5'-phosphate oxidase family protein TERM 1423 2004642 - 2004629 - G 72 -3.7 -4.63486 | AGCTCTTCAACAAAA GCCTC GGGT GGGGC AAGAGGGCCTTTAGG CYA_1986 2006355 - 2005093 - | acetyltransferase CYA_1987 2007128 - 2006475 - | hypothetical protein TERM 1424 2007432 - 2007448 + H 78 -5.9 -4.7497 | overlap 2007429 2007434 CCCCGGAGTATTCTC TGGAAAG AGC CTTTCTA TTTTTGGTGGGTGAG murA 2007472 - 2008917 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1425 2009151 - 2009180 + G 71 -8.6 -3.90318 | gap 1, overlap 2009152 TGGAGAAGGATCCTT TGCC-CCGCTACA AACCC TGTGGCGGCGGCG TTTCTCCCATGGTGG CYA_1990 2009039 - 2010169 + | geranylgeranyl reductase family protein CYA_1989 2010651 - 2010166 - | sensor histidine kinase CYA_1991 2011592 - 2010771 - | OmpA family protein CYA_1992 2012391 - 2011735 - | S24 family peptidase CYA_1993 2012542 - 2012814 + | hypothetical protein CYA_1994 2012908 - 2013270 + | NADH dehydrogenase subunit A CYA_1995 2013267 - 2014001 + | NADH dehydrogenase subunit B TERM 1426 2014043 - 2014029 - g 76 -7.8 -4.29432 | CAAAGCCCAGCAAAA GCCGTC CTC GACAGC CGAGCCGACAGAGCC CYA_1996 2014003 - 2014548 + | NADH dehydrogenase subunit J CYA_1997 2014596 - 2014769 + | hypothetical protein TERM 1427 2015280 - 2015301 + GF 100 -5.1 -5.75342 | AGTGGGACGAGATCC CAGATGGTT CGGT AACCGGCTG TTTTTTTTCCAACGA TERM 1428 2015770 - 2015782 + G 73 -3.3 -4.72986 | overlap 2015771 GTGCCTGGGCTTCAC CCAGC AGA GCTGC TTTTTGGTGAACCTG TERM 1429 2015963 - 2015980 + G 71 -8.3 -3.85698 | AGCGAGGCGGAAGCG GCCCAGC CGCT GCAGGGC TTTGTCGAGCCGGAG CYA_1998 2014781 - 2016007 + | hypothetical protein CYA_1999 2015755 - 2016264 + | hypothetical protein CYA_2000 2017822 - 2016332 - | hypothetical protein TERM 1430 2016926 - 2016896 - G 74 -5.3 -4.58283 | gap 1 GAACTGGGCCAAAAA GCTCTCCGCTGCCG CCCG CGGCTGC-AAGGGC ACAATCCCCACCCCC TERM 1431 2017888 - 2017865 - R 70 -11 -3.04461 | CATTTACGCTGAACA CTGCTGAGCA TTAC TGCTCAGCGG TGAAGCGATAGCATT CYA_2001 2019133 - 2017853 - | ISSoc2, transposase CYA_2002 2019605 - 2018988 - | ISSoc2, resolvase TERM 1432 2019730 - 2019766 + r 74 -12.4 -3.14132 | gap 2 CGCCACTGCCCTCAC CCCCAAC-C-CCTCTCCC AGA GGGAGAGGGGAGTTGGGA TTGGTCGGGAACGGG CYA_2003 2021053 - 2019791 - | hypothetical protein TERM 1433 2020586 - 2020603 + g 82 -3.3 -5.14563 | overlap 2020588 ATTGGCGCGAATGAT GCCCTCG GGCT TGAGGAC TTTTTTCATCGCCCG TERM 1434 2020704 - 2020674 - G 71 -9 -3.73775 | overlap 2020679 TTCAGGCTGATGAAA TCGAACTGGATCCC CAG GCGATCCAGCTCCA GCACGTTGAGGACGT CYA_2004 2021157 - 2021975 + | hypothetical protein TERM 1435 2022857 - 2022840 - g 70 -7.7 -4.07568 | gap 1, overlap 2022841 CTTCCTGCGGGAAAA CCCGGCAG CGG CTGC-GGG CGTGGGCATTGCCAC CYA_2005 2022286 - 2023263 + | nuclease domain-containing protein CYA_2006 2023324 - 2024142 + | TPR repeat-containing protein TERM 1436 2024272 - 2024235 - f 76 -7 -4.61873 | TCCTAGAAAGGAAAA GCCC-CCACGACTCCCTC AAAA GAGGAAA-CGGGGCGGGC GCAGTGCCTCAGTCT CYA_2007 2024321 - 2024443 + | hypothetical protein CYA_2008 2024694 - 2025113 + | hypothetical protein CYA_2009 2026390 - 2025296 - | MazG family protein TERM 1437 2026281 - 2026266 - G 81 -3.9 -5.00884 | opp_overlap 2026273, overlap 2026267 ACCTGCTGTAAAAAA CGACG CAGCTC CGCCG GATCCTTCTTCCCGC TERM 1438 2027309 - 2027288 - g 90 -2.3 -5.44721 | gap 1, overlap 2027291 ATGACTCTAAAAAAA GACCTACTGC AGT GCAA-AAGTC AAAGAAGAGGAGGTG CYA_2010 2026943 - 2027347 + | ISSoc4, transposase orfA CYA_2012 2027934 - 2028476 + | putative transposase, truncation recG 2030812 - 2028491 - | ATP-dependent DNA helicase RecG TERM 1439 2028671 - 2028656 - G 70 -10.4 -3.59979 | GCTGGCCAGGGCAAA GTCGGG CAGC CCCGAC TGGCGGGTGCCCATC TERM 1440 2029325 - 2029336 + g 72 -7.2 -4.1891 | CATGGTCAGGACATC GGGG TGAT CCCC TTTCTGTTGCAGGGC TERM 1441 2031040 - 2031017 - R 86 -10.2 -4.27316 | overlap 2031036 CGCCTCAACTCAAAA GGGCCTGCTC TGTA GGACAGGCCC AGGGATCCAGAGCAA psaM 2031172 - 2031074 - | photosystem I reaction center subunit XII glyA 2031422 - 2032726 + | serine hydroxymethyltransferase TERM 1442 2033309 - 2033362 + G 76 -5.8 -4.62069 | gap 2, overlap 2033311 GTAACGCTGCTCCTG GATC-GGCCGGCGGCGGCC-ATGCTG GCGG CAGCCTTGGCCGGGGCCTGCCTGGGC TTTTTGCGCTACAAC TERM 1443 2033487 - 2033497 + G 91 -4.6 -5.31275 | overlap 2033482 TAACCACGCTGGCGG TGGC CCT GCCG TTTTTTATCCTGGCC CYA_2016 2032760 - 2033854 + | glycosyl transferase, group 4 family protein CYA_2017 2033862 - 2034485 + | hypothetical protein apt 2035025 - 2034498 - | adenine phosphoribosyltransferase TERM 1444 2035092 - 2035106 + H 74 -2.8 -4.91712 | CCCACTTAGCTTAAG GGCA GATGGAA TGCC TTTTTGTCCGTTCGG TERM 1445 2035554 - 2035542 - g 74 -4.8 -4.58663 | opp_overlap 2035532 AGTACCCTGCAAAAA GCTG GTCTT CAGC CTCAAGGATCCGGAT CYA_2019 2035204 - 2035641 + | hypothetical protein CYA_2020 2037637 - 2035763 - | M3B family peptidase TERM 1446 2037559 - 2037581 + g 78 -14.2 -3.01712 | GTACCTGCTCTTCCA GCTCATCCCA CGC TGGGATGGGC TCTTCCCCGGGGCCA TERM 1447 2038286 - 2038271 - g 71 -6 -4.36914 | overlap 2038273 GGTGCCCCGAGAAAA CGGCCC GGAA GGGGCG CTGGTGCAAGGGATC TERM 1448 2038501 - 2038554 + G 70 -7.2 -4.08216 | opp_overlap 2038493 GCCACAACCTGTTGC TGGTGGGCAGCCCGGGAGCGGGCA AGACCA TGCTCGCGCGTCGTCTGCCCGGCA TTTTGCCGCGGCTGC CYA_2021 2037846 - 2039396 + | Mg chelatase-like protein TERM 1449 2039409 - 2039435 + T 71 -12.2 -2.86475 | TGAGCCCTCACCCCC GGCCCCTCTCCC AGA GGGAGAGGGGAG TATGGTATGGGATTG recF 2040600 - 2039458 - | recombination protein F TERM 1450 2040665 - 2040645 - R 85 -12.5 -3.78934 | opp_overlap 2040647, overlap 2040647 TTCTGGGCAGAAGAA CAGCCCCCG CGG CGGGGGCTT TTACTCTAACGCAAC TERM 1451 2040647 - 2040663 + r 100 -15.1 -4.34402 | opp_overlap 2040645 2040647 CTGGGCAGAAGAACA GCCCCCG CGG CGGGGGC TTTTACTCTAACGCA TERM 1452 2040663 - 2040647 - R 88 -15.1 -3.4811 | opp_overlap 2040647, overlap 2040645 CTGGGCAGAAGAACA GCCCCCG CGG CGGGGGC TTTTACTCTAACGCA CYA_2023 2041396 - 2040704 - | helix-turn-helix domain-containing protein CYA_2026 2043209 - 2042952 - | hypothetical protein CYA_2027 2043920 - 2043231 - | DNA-binding response regulator CYA_2028 2043999 - 2044391 + | hypothetical protein CYA_2029 2045318 - 2044446 - | iron chelate ABC transporter substrate-binding protein TERM 1453 2044617 - 2044599 - G 72 -2.2 -4.74103 | GCGGGAACGGAAAAA GGCCAAGG GAT CCGCCGCC TCCGGGTTGACCACC CYA_2030 2046667 - 2045348 - | TonB family protein TERM 1454 2045652 - 2045680 + g 72 -12.3 -3.32343 | ACTGCTGCGGGCGAG GAGGTGGGGGAGG ATG CCTCCCCGGCCCC TTCTGCCGCTGTCGG CYA_2031 2049128 - 2046708 - | TonB-dependent heme/hemoglobin receptor family protein TERM 1455 2047729 - 2047717 - G 79 -9.1 -4.18802 | overlap 2047707 ACATACAGCCCAAAA CGGAC GGT GTCCG AGTCGGGAAAATCTT CYA_2032 2050011 - 2049166 - | iron chelate ABC transporter ATP-binding protein CYA_2033 2051051 - 2050008 - | iron chelate ABC transporter permease protein TERM 1456 2050069 - 2050050 - G 74 -4.9 -4.62783 | CAGCCAGCCGAAAAA CGGCGCC CCCATC AACGCCG TGACGATCCCCACCG TERM 1457 2051373 - 2051394 + r 79 -10.1 -4.12474 | opp_overlap 2051372 AAGTCCTTGACATAC TCCCCTACC TAAA GGCAGGGGA TTCTTGTTCTTGGTT CYA_2034 2052723 - 2051443 - | putative transposase TERM 1458 2052811 - 2052758 - H 79 -7.9 -4.57353 | opp_overlap 2052762 2052774 2052775 2052789 TCTTATCAGATAAAA CAATCTGCGCCTTATATCCCTGACC TAAA GGGCGGGGCTTTATGGCGCCGCTTG GTAATCTCCTCTCTT TERM 1459 2054585 - 2054571 - g 85 -2.8 -5.28942 | GAGCTCAAAGAAAAA GAGG CCCGCAT CCTC ACCGCCCAAACCGAG mutS 2052972 - 2055620 + | DNA mismatch repair protein CYA_2036 2056153 - 2055623 - | hypothetical protein TERM 1460 2056111 - 2056097 - G 81 -7 -4.72201 | overlap 2056099 2056100 TCGCAGAAAAAAGAA CAGGCC GAT GGCCAG CAAGACCGTAAGCAG TERM 1461 2056109 - 2056099 - G 71 -8.2 -3.96386 | overlap 2056097 2056100 GCAGAAAAAAGAACA GGCC GAT GGCC AGCAAGACCGTAAGC TERM 1462 2056411 - 2056401 - H 81 -4.6 -5.03314 | opp_overlap 2056410, overlap 2056402 CGCATGGGCAAAAAA CCCC TCG GAGG GCAGTGCGCTTTTCA TERM 1463 2057798 - 2057782 - g 70 -7.9 -4.10453 | overlap 2057771 CAAAGCCCTGCAAAA GCTGCGG CAG CCGAAGC GGCGCAACCGAGTGC CYA_2037 2056745 - 2057839 + | RNA polymerase sigma factor SigC mviN 2059484 - 2057850 - | integral membrane protein MviN TERM 1464 2058720 - 2058695 - G 72 -7.7 -4.1821 | AGGAGGCAAAAAAGA GATCCACAT AGACATTG ATGTGGATC ATGCCGGAGGAGATC TERM 1465 2058842 - 2058792 - G 75 -12.4 -3.65351 | GGATCCCCACTCAAA GCGCAGCCGCAGCCGCCCCAGC CCCAGCC GCTGCTGCAGCGGCACCTGCGC CAACCACTGGGCGAT CYA_2039 2060015 - 2059650 - | hypothetical protein cpcE-2 2061056 - 2060229 - | phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit cpcC 2061946 - 2061089 - | phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod cpcA-2 2062703 - 2062221 - | phycocyanin, alpha subunit cpcB-2 2063409 - 2062891 - | phycocyanin, beta subunit TERM 1466 2063646 - 2063627 - H 77 -11.4 -3.65351 | CCACCTCCAGTCAAA CGGCCTCG CAGG CGAAGCCG CTTGCCGACACATGT TERM 1467 2063809 - 2063793 - H 83 -3.7 -5.28481 | overlap 2063794 GATTGAATCAAAAAA TGTAAAG GGA CTTTACT TGCCGCAAAAAGTCT TERM 1468 2063841 - 2063821 - H 71 -4.8 -4.57073 | gap 1, opp_overlap 2063839 2063839 TACTTGCCGCAAAAA GTCTTGGAT CCTC ATCCA-GAC GGGCAATCCCGCCCT cpeT 2064145 - 2064744 + | CpeT protein pheS 2064896 - 2065897 + | phenylalanyl-tRNA synthetase, alpha subunit CYA_2046 2066192 - 2065899 - | hypothetical protein CYA_2047 2066974 - 2066390 - | hypothetical protein TERM 1469 2066625 - 2066637 + g 81 -7.7 -4.46212 | overlap 2066612 2066612 TGCGGCAGCAGAGCT TCCAG TTG CTGGA TTTTCTCCTCCAGAG TERM 1470 2066726 - 2066749 + g 72 -4.5 -4.65895 | gap 1, overlap 2066728 2066743 2066744 CGCCCCTTCGGCCAG GTCGGGGCGG TTGGC CCGCTC-GGC TTTTTCGATGCGAAA CYA_2048 2067805 - 2067062 - | ABC transporter, ATP-binding protein CYA_2049 2069631 - 2067865 - | metallo-beta-lactamase family protein TERM 1471 2069751 - 2069733 - R 72 -10.2 -3.54129 | opp_overlap 2069725 TACACCTCCCGGAAA GGCAGGGG CAA CCTCTGCC GATCTAGCTATCCTA CYA_2050 2071383 - 2069890 - | cellulose synthase, catalytic subunit-like protein TERM 1472 2071172 - 2071150 - G 86 -6.8 -5.0538 | overlap 2071151 CGGCAGTTGAAAAAA CGCCCGCCGC AGC ACCTCGGGCG CGGGCACCCCCTCCT rpmA 2071779 - 2071510 - | 50S ribosomal protein L27 TERM 1473 2071636 - 2071606 - G 71 -8.3 -3.9392 | gap 2 GGCCACCGCAAACAA GGTG-TCGT-CGCCG CCG CGGCGCACGTTCACC CCTGGATGAAACTTG rplU 2072247 - 2071840 - | 50S ribosomal protein L21 CYA_2053 2073154 - 2072405 - | hypothetical protein TERM 1474 2072533 - 2072507 - G 74 -5 -4.56597 | TTTTTGCTGCAAAAA CTCTGCCGCCTC ATC GAGCAGGGAGAG GTCGAACTTGCCCCC CYA_2054 2073488 - 2073207 - | hypothetical protein CYA_2055 2074417 - 2073485 - | DnaJ family protein CYA_2056 2075300 - 2074539 - | hypothetical protein CYA_2057 2076425 - 2075577 - | M28A family peptidase TERM 1475 2075806 - 2075773 - G 76 -8.1 -4.2461 | gap 1, overlap 2075774 2075802 ACCGGCAGGAACAAA CCCCGC-TGGCCGGCT GGC AGCCAGCAACACGGGA TCCCCACCTGCTGAA CYA_2058 2077198 - 2076422 - | HAD family hydrolase lpdA 2077343 - 2078725 + | dihydrolipoamide dehydrogenase CYA_2060 2078861 - 2080132 + | hypothetical protein CYA_2061 2081562 - 2080171 - | putative peptidase TldD glgB 2083899 - 2081587 - | glycogen branching enzyme CYA_2063 2085251 - 2083980 - | ISSoc3, orfB transposase TERM 1476 2084844 - 2084876 + gH 93 -8.5 -5.00616 | gap 1, opp_overlap 2084843 CTTGGGGCAATTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGAGG CYA_2064 2085207 - 2085683 + | ISSoc3, orfA transposase tatA-2 2085907 - 2086185 + | Sec-independent protein translocase protein TatA TERM 1477 2086266 - 2086256 - f 77 -8.2 -4.2558 | TAGGTGCGAGTAAAA GCGG ATA CCGC AAGTTGCACGGCCGG CYA_2066 2086424 - 2087257 + | RNA polymerase sigma-70 domain-containing protein CYA_2067 2087286 - 2088311 + | hypothetical protein CYA_2068 2088432 - 2088539 + | hypothetical protein CYA_2069 2088582 - 2088947 + | hypothetical protein CYA_2070 2089022 - 2089474 + | hypothetical protein TERM 1478 2089561 - 2089582 + F 86 -11.6 -4.18018 | opp_overlap 2089561 CTGTTAGGCAAGGAA GGGATCCC CGGACA GGGATCCC TTTTCGCTGAGGCGG TERM 1479 2089582 - 2089561 - f 77 -12.3 -3.37344 | opp_overlap 2089561 CTGTTAGGCAAGGAA GGGATCCCC GGAC AGGGATCCC TTTTCGCTGAGGCGG glgA 2089672 - 2091147 + | glycogen synthase TERM 1480 2092319 - 2092345 + G 71 -11.4 -3.40522 | TTTGTACAGCGTCAT GGGGCGTCCGCC GCT GGTGGTGGCCCC TTATGATGCCGAGCT TERM 1481 2092839 - 2092815 - g 75 -3.5 -4.82901 | overlap 2092829 TTTCGGCGAGAAAAA GCCACCCCT GAAGACG AGCAGTGGC TGGCCAAGGTGGAAT CYA_2072 2091300 - 2092907 + | glycosy hydrolase family protein ilvB 2094986 - 2093190 - | acetolactate synthase 3 catalytic subunit TERM 1482 2095050 - 2095066 + H 78 -5.7 -4.79756 | opp_overlap 2095047 2095045 2095050, overlap 2095047 TGAGCTAGAAGACCA GCCAGCT ATT GGCCGGC TTTTTAGGTTGTGTA CYA_2074 2095217 - 2095312 + | hypothetical protein TERM 1483 2095333 - 2095356 + F 86 -14 -3.63515 | opp_overlap 2095321 2095325, overlap 2095321 AAATTGATGGCATCC TCCCCTCAAT ATTT ATTGAGGGGA TTATTGCCCCTCGAG TERM 1484 2095458 - 2095472 + G 86 -8.5 -4.59511 | opp_overlap 2095458 TGGCTGGCCTCAAGA CCGGC CCAGA GCCGG TTTTTGCCCAGTCTT CYA_2075 2095412 - 2095531 + | hypothetical protein CYA_2076 2096265 - 2095714 - | hypothetical protein CYA_2077 2096671 - 2096252 - | hypothetical protein CYA_2078 2098180 - 2096672 - | hypothetical protein TERM 1485 2097009 - 2096957 - G 84 -14.1 -3.71848 | gap 1, overlap 2096942 2096958 2096985 2096987 GGCTGCCAGCAAGAA GGCCGCCTGCGGCTGGGCGTGGAC GAAATA GCCCACCCCCAGCGGCAGG-AGCA GGCTGGCCAGCGTCA TERM 1486 2097008 - 2096958 - G 87 -17.6 -2.82895 | gap 1, overlap 2096942 2096957 2096985 2096987 GCTGCCAGCAAGAAG GCCGCCTGCGGCTGGGCGTGGAC GAAATA GCCCACCCCCAGCGGCAGG-AGC AGGCTGGCCAGCGTC TERM 1487 2097230 - 2097209 - G 83 -7.1 -4.82901 | overlap 2097211 TTGGGCCGACAAAAA CAGGGCGGC CATT GCCCCCCAG CGGCTGGGAAAAGCC TERM 1488 2097228 - 2097211 - G 73 -8.3 -4.03995 | overlap 2097209 GGGCCGACAAAAACA GGGCGGC CATT GCCCCCC AGCGGCTGGGAAAAG TERM 1489 2097859 - 2097849 - G 83 -4.6 -5.01497 | AGCAGCAGAGAAAAA GCAG CTC CCGC CTCAGATTCCTCGAA CYA_2079 2098221 - 2100545 + | TPR repeat-containing protein CYA_2080 2101133 - 2100756 - | hypothetical protein CYA_2081 2101767 - 2101216 - | ISSoc4, transposase orfB CYA_2082 2102147 - 2101749 - | ISSoc4, transposase orfA TERM 1490 2102446 - 2102424 - R 77 -11.3 -3.62597 | gap 1, opp_overlap 2102423 TGGACTGCGTAAGAA TCCC-CCGCC TTCA GGCGGTGGGA GTGTTAAATCCAGCT CYA_2083 2102694 - 2102434 - | sulfate permease (SulP) family protein truncation CYA_2084 2102943 - 2103374 + | hypothetical protein TERM 1491 2103885 - 2103911 + G 73 -2.9 -4.68593 | opp_overlap 2103901, overlap 2103886 GACGAACCCCGCCGC TTCGATCTGCG CAAAC CCCGGGTCGAG TTTTTGGCTCCTGAC CYA_2085 2103444 - 2104289 + | hypothetical protein TERM 1492 2104621 - 2104638 + G 72 -2.5 -4.72986 | overlap 2104622 CGCGACCAGGCCCTG CCCCTGG GGAT CCTGGGC TTTTTGCTGGGGGTG CYA_2086 2104399 - 2105160 + | hypothetical protein CYA_2087 2105167 - 2105934 + | hypothetical protein CYA_2088 2107104 - 2105977 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-type CYA_2089 2107683 - 2107234 - | collagen alpha 1(III) chain CYA_2090 2107752 - 2107850 + | hypothetical protein CYA_2091 2109066 - 2108029 - | hypothetical protein TERM 1493 2108503 - 2108491 - GT 74 -4.7 -4.64861 | overlap 2108492 TGCGCTGAAAACAAA TCCCC GCA GGGGT GTAGGCTGGCCGGAC CYA_2092 2108861 - 2108667 - | hypothetical protein CYA_2093 2110315 - 2109020 - | hypothetical protein TERM 1494 2109735 - 2109721 - GH 72 -7.8 -4.18197 | overlap 2109700 ACTGGGGATCCAAAA CCAGCA GGC TGCCGG AGCCGTCCATGAGAA TERM 1495 2109777 - 2109751 - GH 70 -9.5 -3.40522 | gap 1, overlap 2109766 AGCCGTCCATGAGAA TGGC-CATCAGC AAAG GCTGACGGGCCA GCTCCGCTCGAGGAT CYA_2094 2110346 - 2110480 + | hypothetical protein TERM 1496 2111173 - 2111162 - g 81 -7.2 -4.40132 | opp_overlap 2111162, overlap 2111163 2111164 ACCAAGCAGAAGAAA GCCG GGCT CGGC TTTAAGCCCATCCCC CYA_2095 2110496 - 2111197 + | hypothetical protein tyrS 2112518 - 2111265 - | tyrosyl-tRNA synthetase psbU 2113326 - 2112928 - | photosystem II complex extrinsic protein precursor U gcvP 2113505 - 2116435 + | glycine dehydrogenase CYA_2099 2117259 - 2116444 - | hypothetical protein TERM 1497 2117449 - 2117410 - R 80 -5.1 -4.85782 | gap 2, opp_overlap 2117446 TCTGGCAAAAACAAA GGGGCAAAAGCG-GCC-CT CAAG AGTGGCACATTTTTACCCC TATCGAGGAGATTAT CYA_2100 2118944 - 2117544 - | amidase TERM 1498 2117944 - 2117922 - G 72 -4.1 -4.56775 | gap 1, overlap 2117923 AGCTCCGGCCAAAAA GCGATCCCGG GTGG CCGG-ATCGA AGTCGTGGGGGCGAG CYA_2101 2119129 - 2118941 - | hypothetical protein CYA_2102 2119831 - 2119223 - | hypothetical protein TERM 1499 2119585 - 2119547 - G 83 -8 -4.56597 | opp_overlap 2119576, overlap 2119549 CGCCTGGTGCAAAAA GCGCGTCAGCTCCGGGAT CTG ATCCCGCAACTGCTGCTC CAGCCGGTCAATTTG CYA_2103 2120823 - 2119978 - | hypothetical protein accD 2120988 - 2121932 + | acetyl-CoA carboxylase subunit beta CYA_2105 2122212 - 2122586 + | anti-anti-sigma factor CYA_2107 2122669 - 2123367 + | hypothetical protein CYA_2106 2125556 - 2123364 - | TrkA domain-containing protein TERM 1500 2125400 - 2125390 - G 76 -8.2 -4.20367 | TCCTTTAACAAAGAA GGCC GCG GGCC AGGAGCCACCACCAC CYA_2108 2125777 - 2125625 - | hypothetical protein TERM 1501 2125877 - 2125858 - H 95 -13.6 -4.09685 | opp_overlap 2125845 CGGCATTTGGGAAAA CTCCCCTG CTTT CAGGGGAG GGACTTTCAAGTGCT CYA_2109 2125969 - 2127015 + | iron ABC transporter substrate-binding protein CYA_2110 2127006 - 2127473 + | hypothetical protein TERM 1502 2127500 - 2127481 - f 91 -5.8 -5.4505 | gap 1, overlap 2127484 CGGTTTAAGAAAAAA CTATGCTTG TAA CAAGCA-AG ACGAGAACATCGTTT TERM 1503 2127562 - 2127582 + F 95 -12.6 -4.63218 | AGAGAAAACTTGGTT GGGGATCC CTGGA GGATCCCC TTTTCTTCCCCAGGA CYA_2111 2127641 - 2129362 + | iron ABC transporter permease atpG 2130422 - 2129478 - | F0F1 ATP synthase subunit gamma TERM 1504 2130279 - 2130269 - G 73 -6.8 -4.37886 | GCAGGCGGTAGAAAA CCTG GGC CAGG CGATCGGCAAAGGGA atpA 2131988 - 2130468 - | F0F1 ATP synthase subunit alpha TERM 1505 2130503 - 2130514 + g 72 -7.2 -4.1413 | AGCTTTGCTTGAACT CCGC GATG GCGG TTTTCAAGATCTCTT atpH 2132596 - 2132048 - | F0F1 ATP synthase subunit delta TERM 1506 2132392 - 2132405 + g 84 -3.8 -5.13741 | opp_overlap 2132392 TCTGGTCGGCAAACA CCTG CTGCAA CAGG TTTTTCTTGGCTTCC atpF 2133155 - 2132613 - | F0F1 ATP synthase subunit B CYA_2116 2133682 - 2133209 - | F0F1 ATP synthase subunit B' TERM 1507 2133769 - 2133726 - R 80 -15.2 -2.66869 | overlap 2133723 2133722 ACATCGAACAAGGCA GGGGGCGAACCGGCGCAACA GAGC TATTGATCCGGGCCGCCCCC AGAGACATCAGGCGA atpE 2134022 - 2133777 - | F0F1 ATP synthase subunit C CYA_2118 2134298 - 2134167 - | hypothetical protein atpB 2134998 - 2134252 - | F0F1 ATP synthase subunit A CYA_2120 2135384 - 2135004 - | ATP synthase protein I CYA_2121 2135901 - 2136488 + | hypothetical protein CYA_2122 2136485 - 2136799 + | hypothetical protein gpmI 2138405 - 2136813 - | phosphoglyceromutase TERM 1508 2137617 - 2137606 - G 72 -4.4 -4.60797 | TCGGGACAGACAAAA GCTT GGGT AAGC TGGCGGGCGCGATCC TERM 1509 2138621 - 2138608 - R 75 -5.9 -4.55287 | overlap 2138610 TCTACCCAGATAAAA CACGG TCAG CCGCG GGGGCTGGGCCGCAA CYA_2124 2139137 - 2138613 - | TPR repeat-containing protein dps 2139680 - 2139180 - | DNA starvation/stationary phase protection protein Dps trmE 2141178 - 2139799 - | tRNA modification GTPase TrmE glgP 2141368 - 2143968 + | alpha-glucan phosphorylase TERM 1510 2144023 - 2143996 - f 75 -11.3 -3.52515 | opp_overlap 2144000, overlap 2144011 ACCCAAAAGGGAGAA GGAAGGGGAAC AGCAGG GATCCCCTTCC TATGCGGATCCAGCC CYA_2128 2144130 - 2145191 + | TPR repeat-containing protein CYA_2129 2145184 - 2145312 + | hypothetical protein ilvH 2145309 - 2145833 + | acetolactate synthase 3 regulatory subunit CYA_2131 2145879 - 2146520 + | hypothetical protein CYA_2132 2147455 - 2146709 - | hypothetical protein TERM 1511 2148505 - 2148526 + G 78 -6.5 -4.65895 | CCTGCGCCTGTTGCG GGAGGGAGA GTTT TTGCCCTCC TTTTTGGATAAGGGA glk 2147594 - 2148640 + | glucokinase CYA_2133 2148723 - 2148619 - | hypothetical protein CYA_2135 2149301 - 2148726 - | NUDIX family hydrolase trpE 2149406 - 2150902 + | anthranilate synthase component I CYA_2137 2150921 - 2151715 + | phytanoyl-CoA dioxygenase PhyH family protein chlG 2151943 - 2152863 + | bacteriochlorophyll/chlorophyll a synthase CYA_2139 2152880 - 2153023 + | hypothetical protein CYA_2140 2153020 - 2153475 + | hypothetical protein CYA_2141 2154880 - 2153498 - | sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein TERM 1512 2153975 - 2153951 - G 72 -2.7 -4.72272 | overlap 2153953 GGCCTGCAGGAAAAA TAGGCCCGCCT GCG AGATGAGCCAA AACCCCGCCCCGATC TERM 1513 2154662 - 2154629 - G 73 -8.7 -4.09685 | overlap 2154631 GGGGATGGCCGAAAA CAGCAGCCAGGGGCG GCGA CGGCCCCAACGGCTG CGGGTGCGGTCGCTG aspA 2156349 - 2154964 - | aspartate ammonia-lyase TERM 1514 2155564 - 2155540 - G 76 -9.9 -3.88787 | CGACAGGTGCACAAA GGGGGCCATGC TCT GCATCGCCGCC ATGGGATGGGGGGCC CYA_2143 2156652 - 2156386 - | hypothetical protein TERM 1515 2157220 - 2157210 - g 88 -8.2 -4.75967 | AAGGAGAAAAAAGAA CGGG AGG CCCG CAAAAAACAACACAC infC 2156949 - 2157506 + | translation initiation factor IF-3 bcp 2157522 - 2157986 + | bacterioferritin comigratory protein TERM 1516 2158998 - 2159032 + G 91 -9.3 -4.63218 | gap 2 TCCAGGCGGTCACCT CCCGG--CCTGCAGGTC TGG GATCTGCCGGATCCGGG TTTTGTTGGCGAGGG TERM 1517 2159234 - 2159257 + G 76 -6 -4.56597 | gap 1 GCAAGTGCTGCCCTT GCCG-AGCTTC CCG GAGGCTTTGGC TTTTTCCAAAAGCAA TERM 1518 2159735 - 2159756 + G 78 -7.1 -4.57569 | overlap 2159739 2159741 CTCGGTGCAGGTCAA CCCGCTGCG GCTG CGCCGCTGG TTTTTGAAGGGGTGG CYA_2146 2158113 - 2160044 + | serine/threonine protein kinase CYA_2147 2161619 - 2160096 - | GTP-binding domain-containing protein TERM 1519 2160694 - 2160715 + g 71 -5.7 -4.38927 | overlap 2160695 ACCAGGGCGCCTGTA TCGGGGGGC TGCG GCTCCCAGG TTTCTTGTCTGGAGC TERM 1520 2161379 - 2161349 - G 76 -13.8 -3.17075 | opp_overlap 2161348 2161345 CCCGCGTCAACTTAA CCCGCCGCCGCGGC TTA GCCGCTGGGGTGGG ATCCTGTTGCGGTCG TERM 1521 2161790 - 2161807 + r 71 -4.9 -4.56775 | gap 1 CTAGCATAGGGCTAG CTGTA-GC TGG GCATACAG TTTTTGCAAGAAGCT CYA_2148 2162022 - 2161837 - | hypothetical protein TERM 1522 2161929 - 2161912 - GR 78 -6.9 -4.59853 | overlap 2161913 CCAAGTGGCCAAAAA GGCCAGG GATC CCTGGCA AAACCGCCGGCGGCT TERM 1523 2161928 - 2161913 - GR 70 -10.4 -3.3543 | overlap 2161912 CAAGTGGCCAAAAAG GCCAGG GATC CCTGGC AAAACCGCCGGCGGC CYA_2149 2162068 - 2161892 - | hypothetical protein TERM 1524 2161951 - 2161933 - G 76 -9.5 -4.08216 | GGATCCCTGGCAAAA CCGCCGG CGGCT CCAGCGG CGCTGGCAAAAACTC CYA_2150 2162611 - 2162126 - | fasciclin domain-containing protein TERM 1525 2163875 - 2163918 + G 71 -8.1 -3.84451 | gap 1, opp_overlap 2163861 2163871, overlap 2163874 AGCTCAGGCAACTGC GCCAGGAGCGCAACGTGCTG ATCCG CGGCGTGTT-CGATCCCGGC TTTGCCTTTCGCGAC CYA_2151 2162830 - 2164593 + | phospholipase D/competence protein ComEA accA 2165586 - 2164603 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha CYA_2154 2165821 - 2166285 + | hypothetical protein CYA_2153 2166743 - 2166261 - | hypothetical protein CYA_2155 2169575 - 2166747 - | sensor histindine kinase/response regulator TERM 1526 2167268 - 2167256 - GR 73 -6.9 -4.2828 | overlap 2167259 GCGGATCCACGAAAA GAGCG ATT CGCCC ATCGGCCAAAACCGT CYA_2156 2170581 - 2169520 - | putative methyl-accepting chemotaxis protein, truncation TERM 1527 2170541 - 2170551 + gH 72 -2.4 -4.72272 | overlap 2170536 2170536 CGCTCCCGTTCCTGG GCGG CCA CGGC TTTTTGCTCCAGCGC TERM 1528 2171824 - 2171845 + G 74 -2.1 -4.85918 | opp_overlap 2171824 2171827, overlap 2171827 GGGGGCTGTCGTAAA CCAGCCTAG AGGT CCGGGCTTG TTTTGTTCTCTGGTA CYA_2158 2170715 - 2171908 + | ISSoc1, transposase TERM 1529 2171922 - 2171889 - T 81 -13.1 -3.65351 | gap 1, opp_overlap 2171887 2171890 2171911, overlap 2171890 TCAGGGCTACTGAAA GCCCGCTCCGTACCGC TTA GCGGT-CGGAGCCGGG TAGTTTACACCAGCT TERM 1530 2171890 - 2171922 + T 87 -16.4 -2.90615 | opp_overlap 2171889 2171890, overlap 2171887 2171911 CAGGGCTACTGAAAG CCC-GCTCCGTACCGC TTA GCGGT-CGGAGCCGGG TAGTTTACACCAGCT TERM 1531 2171921 - 2171890 - T 86 -16.6 -2.78996 | gap 1, opp_overlap 2171890 2171887 2171911, overlap 2171889 CAGGGCTACTGAAAG CCCGCTCCGTACCGC TTA GCGGT-CGGAGCCGG GTAGTTTACACCAGC CYA_2157 2172813 - 2171905 - | hypothetical protein CYA_2159 2173066 - 2172824 - | hypothetical protein CYA_2160 2173669 - 2173121 - | CheW domain-containing protein CYA_2161 2174151 - 2173777 - | response regulator CYA_2162 2175443 - 2174199 - | response regulator TERM 1532 2175677 - 2175662 - R 78 -4.6 -4.87665 | overlap 2175663 TCGTATTCAGAAAAA CTCTCC TCCT GGGGAG ATCGATGACTATTGC CYA_2163 2176308 - 2175829 - | NUDIX family hydrolase CYA_2164 2177547 - 2176315 - | hypothetical protein TERM 1533 2176950 - 2176939 - G 74 -2.2 -4.83615 | overlap 2176947 CACCCCCGACAAAAA CAAG AGCA CCTG CCGCGGCAGCCCCGA CYA_2165 2177802 - 2177602 - | hypothetical protein CYA_2166 2180051 - 2177856 - | piwi domain-containing protein CYA_2167 2180589 - 2180122 - | hypothetical protein CYA_2168 2181737 - 2180637 - | putative lipoprotein TERM 1534 2180817 - 2180799 - G 73 -11 -3.65199 | overlap 2180815 AATGCGGTAGTCAAA GGCTCCCT CCA AGAGAGCC CGCCATTCCGAGCCT nrdJ 2185367 - 2181900 - | ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent, intein-contatining TERM 1535 2183989 - 2183979 - G 90 -8.2 -4.91109 | GCCGGAGTAGAAAAA CCCC TCT GGGG TCGTGCTGAATAGCT TERM 1536 2185806 - 2185819 + G 71 -5.9 -4.29493 | CCTATGGCGTGGTGA CGGCC CTGG GGCTG TTTCTCTCTTTGCTG TERM 1537 2185919 - 2185956 + G 74 -4.6 -4.66163 | overlap 2185943 ATCTTTGGCGGCATG GCGGCCATTGAGCGGG AAGTCC CCCGTCCCCTGGGCGC TTTTTGGGTGGCCCT TERM 1538 2186861 - 2186848 - g 88 -8.1 -4.79352 | CCAGGTAGAAGAAAA CCTCG CCGG CGAGG GATCCCCTAATCCAC CYA_2170 2185700 - 2186890 + | M50B family peptidase CYA_2171 2187005 - 2188312 + | M16B family peptidase TERM 1539 2189221 - 2189244 + G 83 -5.2 -5.00616 | gap 1 CTGCGCGAGCGCAGC GGCC-TGGCCT ATG AGGTCTCGGCC TTTTTTGCCACCCGC CYA_2172 2188312 - 2189625 + | M16 family peptidase CYA_2173 2190574 - 2189855 - | hypothetical protein TERM 1540 2189936 - 2189913 - G 74 -9.5 -3.86944 | TCCACAATCACCAAA GCGGGCAGC AGGTTG GCCACCCGC AGGCGGGCCAGGCCG CYA_2174 2190749 - 2191273 + | acetyltransferase CYA_2175 2191277 - 2191987 + | hypothetical protein TERM 1541 2191971 - 2191991 + T 73 -8.3 -4.09685 | overlap 2191965 2191967 TGGTGGACAGGTGGG CCCCCTA TTTGGTC TAGGGGG TTTTAGCCGCTGGAC CYA_2176 2192713 - 2191994 - | Thf1-like protein proB 2192866 - 2193981 + | gamma-glutamyl kinase CYA_2178 2195272 - 2193986 - | major facilitator transporter TERM 1542 2194192 - 2194178 - G 73 -7 -4.2828 | opp_overlap 2194187 2194189 GGCCATGTAGTAAAA GCCCAC GTT GAGGGC GACATCGTCATCCTC TERM 1543 2194789 - 2194802 + g 72 -3.7 -4.66609 | CGACGAAAAACCCTA CCCCC TTGA GGGCG TTTTTGGATCCCGTC gap-3 2196320 - 2195310 - | glyceraldehyde-3-phosphate dehydrogenase, type I murI 2197444 - 2196566 - | glutamate racemase CYA_2181 2199466 - 2197595 - | N-acetylmuramoyl-L-alanine amidase TERM 1544 2199779 - 2199802 + G 72 -2.3 -4.77036 | overlap 2199781 TCCCAAAGCCCCTCT CCGCCGG TTGTTGTGGC CCGGCTG TTTTTGATGGTGAAG TERM 1545 2200482 - 2200466 - g 72 -2.1 -4.79756 | opp_overlap 2200477 CACAGAATCCAAAAA GGGCTAG CTC CGATCCC GTGGGGAACTCTGCT CYA_2182 2199575 - 2200729 + | hypothetical protein CYA_2183 2203076 - 2200785 - | nuclease domain-containing protein TERM 1546 2201119 - 2201109 - G 76 -8.2 -4.2109 | opp_overlap 2201111 CAAGACATATAGAAA GCGC TTG GCGC GAGCTGTATAACGAG TERM 1547 2201768 - 2201758 - G 84 -2.4 -5.36441 | TCCGGAGAGAAAAAA TCGG CTG CCGG AGAAAAGACAAGGTC CYA_2184 2204712 - 2203378 - | sensor histidine kinase miaE 2205343 - 2204738 - | tRNA-(MS[2]IO[6]A)-hydroxylase TERM 1548 2205199 - 2205214 + g 84 -2.5 -5.25803 | gap 1, opp_overlap 2205195 2205199 2205200, overlap 2205199 2205200 GAAACAGCAAACTAA G-GGCG TTGCC CGCCGC TTTTTTCTCGCAGTT TERM 1549 2205481 - 2205520 + r 95 -12.3 -4.57073 | gap 3 CAGCAGTTGTCCCTA TCCCCGG-C-C-CCTCTCCC AGA GGGAGAGGGGAGTTCGGGGA TTTTTCAGAAGGCTG CYA_2186 2206615 - 2205545 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1550 2206704 - 2206683 - R 90 -8 -5.1675 | gap 1 CGAGCCATCAAAAAA GCCCTG-GC ACTGG GCTCAGGGC TTCAGGACTGACTCA CYA_2187 2208510 - 2207155 - | RND family efflux transporter MFP subunit sufR 2209502 - 2208774 - | iron-sulfur cluster biosynthesis transcriptional regulator SufR TERM 1551 2209606 - 2209616 + H 70 -5.4 -4.41494 | opp_overlap 2209606, overlap 2209592 GGGTTAGTTAAGCAA CAAC CGT GTTG TTTTAGTTGGCCGTC sufB 2209665 - 2211101 + | cysteine desulfurase activator complex subunit SufB mscL 2211346 - 2211744 + | large conductance mechanosensitive channel protein CYA_2191 2211826 - 2211725 - | hypothetical protein TERM 1552 2212073 - 2212063 - g 83 -5.4 -5.02074 | CTACCTGGGAAAAAA TCTC TTG GAGA TGGAGCCAGAAGAGA sufC 2211842 - 2212657 + | FeS assembly ATPase SufC sufD 2212654 - 2213943 + | FeS assembly protein SufD TERM 1553 2214057 - 2214047 - f 100 -8.2 -6.07627 | overlap 2214048 2214049 ACGGCGAAAAAAAAA CGCC CGT GGCG TCGCCGGCTCCCGCC TERM 1554 2214552 - 2214530 - f 74 -3.3 -4.93296 | opp_overlap 2214530 GTAGTAGGAGAAAAA TGTGGCCTC GAAAA GAGTCCCCA ACTTTTGGTTGCAGA TERM 1555 2214942 - 2214909 - g 100 -9 -5.1287 | opp_overlap 2214913 CTTACACCGAAAAAA TGAATCTCAAGCCC GGCGAT GAGTTTGAGATTCA GTTGGGCTATAAGCA CYA_2195 2214617 - 2215069 + | AbrB family transcriptional regulator TERM 1556 2215482 - 2215512 + G 83 -4.7 -5.05113 | gap 2, opp_overlap 2215482 2215484, overlap 2215484 CAGGTAGCTCGACAA CA-GGGGAT-CCGCC TGC GGCAGCGTCCCCATG TTTTGTTTGTCTACG TERM 1557 2216412 - 2216402 - g 90 -8.2 -4.82855 | overlap 2216394 2216403 GATCAAAGGCAAAAA CGCC GTC GGCG CTGCCCCCCCCAGGT CYA_2196 2215206 - 2216606 + | hypothetical protein CYA_2197 2217353 - 2216928 - | nodulation efficiency family protein TERM 1558 2217266 - 2217250 - G 71 -9.3 -3.69449 | overlap 2217248 CAATAGGCCAAAAGA GCAGCCC CTA GGGCAGC CACACCCGCCGGCCC CYA_2198 2217676 - 2217437 - | hypothetical protein CYA_2200 2217819 - 2218007 + | hypothetical protein rrmJ 2219059 - 2217989 - | ribosomal RNA large subunit methytransferase J leuD 2219643 - 2219056 - | isopropylmalate isomerase small subunit CYA_2203 2219606 - 2219800 + | hypothetical protein CYA_2202 2220123 - 2219797 - | hypothetical protein CYA_2204 2220165 - 2220512 + | hypothetical protein CYA_2205 2220509 - 2220667 + | hypothetical protein pyk 2221071 - 2222912 + | pyruvate kinase CYA_2207 2223017 - 2223148 + | hypothetical protein CYA_2208 2223210 - 2223746 + | hypothetical protein CYA_2210 2224764 - 2225393 + | BioY family protein TERM 1559 2225585 - 2225599 + T 95 -8.5 -5.63504 | opp_overlap 2225585 GTCGCTGAGCGACAA GCCCC TTTAT GGGGC TTTTTTTATCGGCTT CYA_2211 2226342 - 2226166 - | hypothetical protein CYA_2212 2227883 - 2226777 - | hypothetical protein TERM 1560 2226926 - 2226952 + g 86 -12.2 -4.11216 | TGATCCGGGATCCGC CGGCGATCCTGC CAG GCTGGATCACCG TTTTGCCAGTGCGCA TERM 1561 2227463 - 2227430 - G 73 -6.7 -4.25104 | gap 1 GCCGCGCCACCAAAA TTTCTTCTGCCGGCAG CGG CC-CCGGCAGGCGAAA CCGCCCTTGGGCATC CYA_2213 2228071 - 2228433 + | hypothetical protein rpmB 2228458 - 2228694 + | 50S ribosomal protein L28 CYA_2215 2229514 - 2228768 - | pentapeptide repeat-containing protein TERM 1562 2229103 - 2229080 - G 77 -2.2 -5.00616 | opp_overlap 2229071, overlap 2229082 GTCGGCGGCAAAAAA GTTGCCTTCC GTTA GGTTGGCAGC CACCAAGCTGGCCTC gshB 2229715 - 2230662 + | glutathione synthetase CYA_2217 2233144 - 2231060 - | sensor histidine kinase TERM 1563 2231520 - 2231494 - G 73 -10.8 -3.54459 | opp_overlap 2231492 GCAAGCTGGGGGAAA TGCGCAGCTTGG TGG CCAGGGTGCGCA CATCGTTAAGCTGCT pnpA 2235388 - 2233250 - | polynucleotide phosphorylase/polyadenylase TERM 1564 2235773 - 2235785 + G 74 -4.7 -4.55798 | opp_overlap 2235764, overlap 2235768 AAAAATCGTCCGAGA GCGGC GGG GCGGC TTTTGCTTTGAGCTG CYA_2219 2235540 - 2235965 + | putative arylamine N-acetyltransferase, truncation TERM 1565 2236871 - 2236903 + F 89 -8.5 -5.00616 | gap 1, opp_overlap 2236870 CTTGGGGCAATTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGAGG CYA_2221 2237234 - 2237710 + | ISSoc3, orfA transposase CYA_2222 2237805 - 2238347 + | putative N-hydroxyarylamine O-acetyltransferase, truncation TERM 1566 2238526 - 2238510 - g 73 -3.5 -4.71776 | overlap 2238511 CAACACCGAAGAAAA GCTGGCC ATC GCCCGGC AACTGGCCCGGCTGG leuA 2238391 - 2240031 + | 2-isopropylmalate synthase CYA_2224 2241087 - 2240056 - | ABC transporter, ATP-binding protein TERM 1567 2241169 - 2241111 - R 84 -6.8 -5.00884 | gap 3, overlap 2241112 ACCCCCCCTAAAAAA TCAGATCCG-CTAGCCCAACTTCAAG-GG CAAG CCTCCTGAGGCTGGGCATGTCGGATCTG- GCTGGGGGTATTCTC TERM 1568 2241169 - 2241112 - R 81 -12.8 -3.60048 | gap 2, overlap 2241111 CCCCCCCTAAAAAAT CAGATCCG-CTAGCCCAACTTCAAG-GG CAAG CCTCCTGAGGCTGGGCATGTCGGATCTG GCTGGGGGTATTCTC apcC 2241423 - 2241220 - | phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core apcB-2 2242049 - 2241564 - | allophycocyanin, beta subunit apcA 2242595 - 2242110 - | allophycocyanin, alpha subunit CYA_2228 2243624 - 2242917 - | hypothetical protein TERM 1569 2243927 - 2243917 - H 79 -8.2 -4.36914 | GCTGGTTGTATAAAA CGGC GTT GCCG GAATCTAATACAACT CYA_2229 2244162 - 2245424 + | S1C family peptidase TERM 1570 2245618 - 2245630 + G 71 -9.1 -3.7941 | CTGCTGGCCCTGTCG GGGCT GGC AGCCC TTGTTCTCGCCCCTC CYA_2230 2245576 - 2246475 + | quaternary amine ABC transporter substrate-binding protein CYA_2231 2246497 - 2247465 + | quaternary amine ABC transporter ATP-binding protein TERM 1571 2247930 - 2247951 + G 72 -4.3 -4.58283 | gap 1 GGGGCTAAGTTTGGG GCGGGAGGGC TGG GCAC-CCTGC TTTTTGAGGGCATTG CYA_2232 2247462 - 2248079 + | quaternary amine ABC transporter permease CYA_2233 2248277 - 2248867 + | RNA polymerase sigma factor CYA_2234 2248888 - 2249655 + | hypothetical protein TERM 1572 2249850 - 2249862 + G 100 -4.7 -5.63517 | GATGGGGTTTACATT CAGCC GGG GGCGG TTTTTTCTTTCAACC CYA_2235 2249700 - 2250320 + | VanW family protein ubiE 2251124 - 2250414 - | ubiquinone/menaquinone biosynthesis methyltransferase CYA_2237 2251874 - 2251176 - | hypothetical protein TERM 1573 2251266 - 2251252 - G 76 -9.2 -4.05714 | AGGCTCAAGGACAAA GACCGG GAT CCGGCC AAGCTGGAGGCGGGG CYA_2238 2252297 - 2252019 - | hypothetical protein CYA_2239 2252968 - 2252345 - | putative chloramphenicol acetyltransferase TERM 1574 2252795 - 2252781 - G 91 -3.5 -5.41143 | TAGCCTGCAAAAAAA TGCAC CTCTC GCGCA ATCGAGCTACAGCGG cobU 2253148 - 2253711 + | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase TERM 1575 2254118 - 2254132 + G 75 -2.8 -4.93296 | AGGCGTTGGAGATCT TCGTCT ACC AGAAGA TTTTTGTGCTGATGC CYA_2241 2253781 - 2254269 + | hypothetical protein CYA_2242 2254275 - 2254811 + | hypothetical protein CYA_2243 2255552 - 2254932 - | putative phosphatidylethanolamine-binding protein TERM 1576 2255630 - 2255604 - R 83 -8.9 -4.5954 | opp_overlap 2255604 2255603, overlap 2255605 CCAGAGGAGAGAAAA CGACTTTTTAG CGAGC CTAAAAAGTCA GCTTTGTAATCCTAG TERM 1577 2255629 - 2255605 - R 70 -10.2 -3.35001 | opp_overlap 2255604 2255603, overlap 2255604 CAGAGGAGAGAAAAC GACTTTTTAG CGAGC CTAAAAAGTC AGCTTTGTAATCCTA CYA_2245 2256086 - 2255670 - | hypothetical protein TERM 1578 2255838 - 2255821 - G 81 -4.1 -5.0538 | gap 1, opp_overlap 2255831 CGCCAGGGCAAAAAA GCC-AGGG ATC CCCTCAGC GTCCACTCGCTGCGG TERM 1579 2256042 - 2256024 - G 71 -8.8 -3.91911 | TTGATCGCAAGGAAA GCGGGC GTAATCG GCCCGC AGGATGGCCACGAGA CYA_2246 2256880 - 2256083 - | hypothetical protein CYA_2247 2258225 - 2256885 - | tldD/pmbA family protein TERM 1580 2257628 - 2257673 + g 73 -8.2 -4.07515 | gap 2 TATCCAGCTCCTCTA GGCTGCGGGCCACCCGCATGGC GCCG GCGCTGCGGG-G-CTTGCGGCC TTCTTGTTCTGCTTT TERM 1581 2257859 - 2257882 + g 72 -4.4 -4.5442 | overlap 2257859 CCAGCTGATCTAGGA GCTCGCTGGC CAGC GCCAGGGGCC TTTTGTCATTACAGG TERM 1582 2258174 - 2258160 - G 79 -11.4 -3.88498 | opp_overlap 2258159 2258157 2258160 TCCGTAGAGATCAAA CTGGGG GAT CCCCAG GTGTTTGGCGCACCT CYA_2248 2258726 - 2258238 - | hypothetical protein TERM 1583 2258762 - 2258739 - R 70 -11 -3.04461 | CATTTACGCTGAACA CTGCTGAGCA TTAC TGCTCAGCGG TGAAGCGATAGCATT CYA_2249 2260007 - 2258727 - | ISSoc2, transposase TERM 1584 2258885 - 2258863 - GR 72 -9.8 -3.55444 | overlap 2258876 2258879 GCGGTATCCCGCAAA GCCCTGAGCA TAA CACCCAGGGC GCCTTGCCAATCTCG CYA_2250 2260479 - 2259862 - | ISSoc2, resolvase CYA_2251 2260992 - 2260534 - | hypothetical protein CYA_2252 2262468 - 2261008 - | U62 family peptidase TERM 1585 2261544 - 2261563 + g 75 -3.5 -4.83615 | CCCCCTCGGAAAGCC CCTCGTC CCAGGC GGTGAGG TTTTTGTGGGCAATC CYA_2253 2262759 - 2263379 + | uracil-DNA glycosylase CYA_2254 2264308 - 2263460 - | cyclopropane-fatty-acyl-phospholipid synthase family protein CYA_2255 2264471 - 2264334 - | hypothetical protein TERM 1586 2265762 - 2265739 - gR 75 -4.4 -4.72986 | gap 1, overlap 2265741 2265742 CAGTGGTATCAAAAA CACCTGCGCCC CCT GGGCGT-GGAG TTCCGCCCGGAAAGC CYA_2256 2264431 - 2266038 + | radical SAM domain-containing protein TERM 1587 2266070 - 2266055 - TR 75 -9 -4.07687 | ATGTCGTGCCTAAAA TCCCCT AGGA AGGGGA TTGACGGTGAGAGCC rbsK 2266988 - 2266059 - | ribokinase CYA_2258 2267109 - 2267420 + | hypothetical protein CYA_2259 2268175 - 2267426 - | hypothetical protein CYA_2260 2269023 - 2268271 - | hypothetical protein CYA_2261 2268264 - 2268362 + | hypothetical protein CYA_2263 2269213 - 2269932 + | hypothetical protein CYA_2262 2272094 - 2269929 - | protein kinase TERM 1588 2270679 - 2270661 - G 72 -2.3 -4.8048 | overlap 2270662 CGGCCAGAGCAAAAA GGCGGCT AGCAA AGCCACA GCGCCTCCCCCGGCC TERM 1589 2271743 - 2271755 + g 74 -4.7 -4.58395 | opp_overlap 2271734 2271731, overlap 2271732 GAATGACTTGCCGAA GCGGC AGA GCCCC TTTTTCCCGCATCAG TERM 1590 2271971 - 2271984 + g 71 -8.1 -3.8969 | GCAGGATCTTGACCG CCACC TCTT GGTGG TTGTTGTGTAAGTCC TERM 1591 2272337 - 2272365 + H 82 -2.4 -5.4756 | gap 2, overlap 2272337 2272338 GCTTTGCGCCGCCAG CG-CGTG-CGCGAC AGC GTTGCGACAAGCCG TTTTTTATTACCATT TERM 1592 2272767 - 2272803 + G 76 -5.8 -4.57569 | gap 1, overlap 2272761 GGCCCCCCATGGGAT CCCCATTTTGCCCATTC AGTC GGG-GGGCAGGCTGGGG TTTTTGGCCCAGTCA TERM 1593 2273435 - 2273419 - g 75 -3.6 -4.83169 | ACCCTGCGAGAAAAA CTGCAG TGGGC CGGCAG CCGCATCTACATCCC ppnK 2272522 - 2273481 + | inorganic polyphosphate/ATP-NAD kinase CYA_2265 2274876 - 2273668 - | hypothetical protein TERM 1594 2274531 - 2274503 - G 72 -4.4 -4.66163 | overlap 2274505 ACCTGTAGGGAAAAA CTGGGCAGGCGC CGTTT GCGGTTGACCAG CGTCAGCCCCACCAA CYA_2266 2276132 - 2274972 - | DegT/DnrJ/EryC1/StrS aminotransferase family protein TERM 1595 2275585 - 2275575 - G 86 -6.8 -5.00616 | TTTGGTGGGAAAAAA GCTG AAG CAGC CGATATCTCCCCAGG TERM 1596 2276346 - 2276362 + H 73 -5.1 -4.57073 | GCTTGGTTTGTCTTG CTTAGCT GCC GGCTAGG TTTTTCACGAAGGTA TERM 1597 2276691 - 2276719 + G 77 -2.5 -4.96028 | gap 1, overlap 2276708 CCCCCGAATTCTAGC TTTGGT-GCCGG GAGGGA TTGGCGACCAAA TTCTTTTTTTTCCCA TERM 1598 2277325 - 2277309 - g 76 -9.3 -4.07568 | GGGCTTCCGGGAAAA GCGGCCG GAG CTGCCGC TGGTGCTGCTGCTGG CYA_2267 2276671 - 2277645 + | heptosyltransferase family protein CYA_2269 2279024 - 2278032 - | M23B family peptidase CYA_2270 2279849 - 2279028 - | biotin--acetyl-CoA-carboxylase ligase CYA_2271 2280500 - 2279868 - | hypothetical protein pdxJ 2281234 - 2280497 - | pyridoxal phosphate biosynthetic protein PdxJ CYA_2273 2281403 - 2282470 + | putative general secretory pathway protein CYA_2274 2282914 - 2282600 - | hypothetical protein TERM 1599 2282767 - 2282777 + g 73 -6.8 -4.26589 | overlap 2282748 AGAGCTTCTCGACCC GCTC CGA GAGC TTTTGGGTATCTCCT lepB 2283075 - 2283761 + | signal peptidase I sds 2284748 - 2283777 - | solanesyl diphosphate synthase TERM 1600 2283875 - 2283820 - G 95 -10.3 -4.44448 | gap 1, opp_overlap 2283864 ACCATCTGAAACAAA GCTCGGCGGGCTACCGAATCG-GGGA GAACT TCCAACGCCTCAGCAGCCCGACGGGC ATAGTCTCGCGCCAA CYA_2277 2284760 - 2285257 + | hypothetical protein CYA_2278 2285746 - 2285309 - | hypothetical protein TERM 1601 2285804 - 2285818 + H 73 -5.6 -4.56597 | overlap 2285806 CGAAGATGCCACCTG GTGTCG ATT CGACCC TTTTTCAGCCGAGGA rpsP 2285985 - 2286452 + | ribosomal protein S16 TERM 1602 2286448 - 2286434 - f 83 -10 -4.30576 | GCCTGAGGAGGAAAA GCCTCA GGT TGAGGC CTAGGGTCGGCTACG CYA_2280 2286516 - 2286776 + | hypothetical protein TERM 1603 2287241 - 2287251 + G 83 -5.4 -5.0538 | TGGTACTGGCGGCGG GCTT CTA AAGC TTTTTTGGGCTCCGA TERM 1604 2287550 - 2287560 + G 83 -6.8 -4.85599 | GTTCCTGGGGAAGTG TCGG CTG CCGA TTTTTCTCCGCTGCC CYA_2281 2286773 - 2287876 + | hypothetical protein hisF 2287904 - 2288665 + | imidazole glycerol phosphate synthase subunit HisF cysQ 2288683 - 2289480 + | 3'(2'),5'-bisphosphate nucleotidase CYA_2284 2289956 - 2289492 - | pentapeptide repeat-containing protein CYA_2285 2290898 - 2290125 - | pspA/IM30 family protein TERM 1605 2290795 - 2290816 + g 71 -5.2 -4.39828 | overlap 2290811 TGATCCTCAGACATG TCCTGAAT GGTTTG GTTCAGGA TTTTCTCCGGATCTT CYA_2288 2291664 - 2291807 + | hypothetical protein CYA_2289 2293013 - 2291817 - | Ser/Thr protein phosphatase family protein TERM 1606 2292446 - 2292491 + g 81 -7.6 -4.40561 | gap 2, opp_overlap 2292445 2292446 CCACAAAATTCAAAC CGGGATCGTGGGCCGGGTCGTT CCAA AACT-CGCGGGCCA-GATCCCG TTCTTTTTGGAAGAG CYA_2290 2293258 - 2293686 + | FUR family transcriptional regulator CYA_2291 2295856 - 2293751 - | hypothetical protein CYA_2292 2296602 - 2295979 - | acetyltransferase CYA_2293 2297020 - 2296553 - | putative cyclase/dehydrase CYA_2295 2297213 - 2298082 + | hypothetical protein CYA_2294 2298411 - 2298079 - | antibiotic biosynthesis monooxygenase domain-containing protein TERM 1607 2298312 - 2298292 - G 74 -5.3 -4.56597 | opp_overlap 2298303 2298306 TTCTTTGCCCAAAAA GCCCGGC TGTTGGC GCAGGGC TGGCCCCCAAACCTG aroA 2299770 - 2298436 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1608 2299964 - 2299984 + H 100 -12.5 -5.75342 | CAACATGGATTCCTC GGTCGGGGC CTG GCCTCGGCC TTTTTTTTGCAAGCC TERM 1609 2300486 - 2300499 + G 74 -9.5 -3.84451 | CGCCCCAACTGGACT GCCCC GAGC GGGGC TTTAGCTTTCGCGCC TERM 1610 2300585 - 2300561 - g 74 -9.9 -3.78775 | CTGCCGATCAGGAAA CGGCTGCCGAC TGG GTCAACCGCCG CCCCGTCGAGGACTT mraW 2300104 - 2301033 + | S-adenosyl-methyltransferase MraW CYA_2299 2301138 - 2301674 + | hypothetical protein CYA_2298 2302414 - 2301671 - | response regulator TERM 1611 2301909 - 2301899 - G 90 -8.2 -4.82901 | overlap 2301900 TCGCCGCGACAAAAA CCGC CGT GCGG CAATAGCTTGATCGG tyrA 2303405 - 2302545 - | prephenate dehydrogenase CYA_2301 2303622 - 2304125 + | hypothetical protein scpA 2304928 - 2304173 - | segregation and condensation protein A CYA_2304 2306984 - 2305896 - | glucose/sorbosone dehydrogenase family protein TERM 1612 2306397 - 2306387 - G 72 -4 -4.65895 | opp_overlap 2306390 GGCCGTAGGTAAAAA TTTG CGG CAAA GCCCCCGCTTGATTC TERM 1613 2307411 - 2307448 + G 70 -10.6 -3.61398 | gap 1, overlap 2307441 TGCAGGTGCTCACCC CTCGTCTGCTGCGGCTG CGCTT TAGCCCCAGC-GGCGAG TTCTTGCCCCGCCGC TERM 1614 2307842 - 2307857 + G 75 -3.2 -4.85599 | CTGGTTCTACGTCCT GGCC TCTCCTAC GGCC TTTTTCTGCACTGCA CYA_2306 2307197 - 2309632 + | glycosy hydrolase family protein CYA_2305 2310096 - 2309629 - | anti-oxidant AhpCTSA family protein TERM 1615 2312570 - 2312549 - R 72 -10.1 -3.695 | opp_overlap 2312548 2312547, overlap 2312542 GGGAAAGAGCCTAAA CCGCTTAGC TACG GCTAGGCGG GGTTGTGGGACGGCC TERM 1616 2312808 - 2312797 - R 74 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAAGAGAGCAT TERM 1617 2315278 - 2315296 + r 71 -8.8 -3.73858 | opp_overlap 2315278, overlap 2315274 ATCTCTCCACACCAA CCCCCC AATACAA GGGGGG TTAATTTTCATCTGG CYA_2312 2315851 - 2315321 - | response regulator CYA_2313 2317419 - 2315836 - | hypothetical protein TERM 1618 2315893 - 2315905 + g 76 -5.5 -4.57569 | overlap 2315894 GGCAAGAACCGAACC TTGGC TTA GCCAG TTTTTAAGGCAATAG CYA_2314 2317836 - 2317558 - | hypothetical protein TERM 1619 2318989 - 2319001 + G 74 -4.8 -4.58283 | CCGCCCTGGCCAGGA GGTG AGCTA CACC TTTTTCCCCAGCTTG CYA_2315 2318279 - 2319127 + | ABC transporter, ATP-binding protein TERM 1620 2319139 - 2319175 + T 86 -8.7 -4.8048 | TTAGCGCGCCCTCAG CCTCAACCTCTCTCCTT CGG AAAGAGGGAGGTTACGG TTTTTCCTCTCCCCA CYA_2316 2319889 - 2319170 - | DNA-binding response regulator TERM 1621 2319952 - 2319937 - H 88 -10.4 -4.39426 | overlap 2319939 CAGAGTTGTAGAAAA GCCCTG CCCG CAGGGC AAACGCATTTTGCGC CYA_2317 2320184 - 2320645 + | hypothetical protein TERM 1622 2320760 - 2320727 - f 79 -11.9 -3.66139 | gap 1, opp_overlap 2320736, overlap 2320733 TACACAGAGGCGAAA CTAG-AAGTACCAGAG ATG CTCTGGTACTTGCAAG CGTTGGCAAAGCCCT TERM 1623 2320753 - 2320733 - f 86 -14.1 -3.60865 | opp_overlap 2320736, overlap 2320727 GAGGCGAAACTAGAA GTACCAGAG ATG CTCTGGTAC TTGCAAGCGTTGGCA TERM 1624 2320847 - 2320859 + G 71 -5.5 -4.27316 | GAGGCCGTTCTTCTC CTGCT GCC AGCGG TTTTCCCTTCGGCAC CYA_2318 2320813 - 2321619 + | hypothetical protein CYA_2319 2321826 - 2322668 + | hypothetical protein TERM 1625 2323161 - 2323184 + G 100 -4.5 -5.40072 | overlap 2323164 2323172 GCTGCCTGTGTTATC TGGGGCTGT TTGGGC ACGGCCCTG TTTTTTTCCCGGCCC TERM 1626 2323172 - 2323182 + G 79 -8.2 -4.34482 | overlap 2323164 2323161 TATCTGGGGCTGTTT GGGC ACG GCCC TGTTTTTTTCCCGGC CYA_2320 2322726 - 2323265 + | hypothetical protein TERM 1627 2323404 - 2323420 + G 84 -2.1 -5.26316 | overlap 2323405 AGCTCCCCAAGGCAG CGCTGCT CAC GGCGGCC TTTTTTGTCGCCTCC CYA_2321 2323268 - 2323912 + | cobalt transport protein CbiM TERM 1628 2324129 - 2324139 + G 72 -2.4 -4.71828 | overlap 2324079 GCTAAGACGGCTGGC CGCC CCA GGAG TTTTGTTGATAGCCT cbiQ 2323899 - 2324714 + | cobalt ABC transporter, permease protein CbiQ TERM 1629 2324899 - 2324910 + F 71 -7.2 -4.11394 | CCCTCAAGGAAGCGC CGGC TGTT GCCG TTTTGCACCTGGGCT yliG 2324913 - 2326232 + | MiaB tRNA modifying enzyme-like protein TERM 1630 2326653 - 2326643 - g 78 -6.8 -4.57569 | overlap 2326644 CGATGCCTCCAAAAA GGTG GCC CACC TGGGCACCCGCTTCC rpiA 2326263 - 2326955 + | ribose 5-phosphate isomerase A pdxA 2327961 - 2326912 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1631 2327216 - 2327237 + g 72 -7.2 -4.13945 | GCTAGCCACATGGTA TCGGGGGG AAGCGG CCCCCAGA TTTTGGCGTGGGGAT TERM 1632 2328218 - 2328237 + H 71 -9.2 -3.78736 | TTTCCAATTTCTAGG GATCCCCC CGAA GGGGGAAC TTTGCTGGGTCTATC TERM 1633 2328435 - 2328458 + H 100 -13.8 -5.03145 | TGTTTCCAATTTCTA GGGATCCCCC CGAA GGGGGAACCC TTTTTTAACAACTTC TERM 1634 2328801 - 2328828 + H 74 -11.2 -3.33696 | ACAGTTTCCAATTTC TAGGGATCCCCC CGAA GGGGGAACCCGA TTCGTTCGCAAGCGA CYA_2326 2329476 - 2330453 + | putative dehydrogenase, E1 component, beta subunit TERM 1635 2330949 - 2330972 + F 72 -9.6 -3.54297 | gap 1 GGTTAAGACCGTGAT CGGGCTGGTGG GGA TCACCA-CCCG TTCTCCTTGGTAGGT CYA_2328 2331574 - 2332773 + | oxidoreductase, FAD-binding dnaG 2334683 - 2332788 - | DNA primase TERM 1636 2334116 - 2334159 + g 84 -8.8 -4.4078 | gap 1, overlap 2334096 ATCCCTGCTGGCGCG GCGCCAGCAAGCCGG-CTTCT TCT AGAAGTTTGACCGGCTGGCGC TTTTGGTTGACCAGG TERM 1637 2334770 - 2334788 + H 82 -8.2 -4.65895 | TAGTGGAGATAATGG TCTAGCTT CAA AAGCTGGA TTTTTCCATGAGCGG petJ 2334829 - 2335176 + | cytochrome c6 CYA_2331 2335176 - 2335523 + | hypothetical protein TERM 1638 2335764 - 2335774 + G 76 -6.8 -4.46112 | overlap 2335760 GCTTGCGGGTGCAGA TCCC AGA GGGA TTTGTTTCCGTGAAG CYA_2332 2335568 - 2336134 + | nuclear export factor GLE1-like protein TERM 1639 2336160 - 2336170 + G 81 -6.8 -4.69027 | overlap 2336139 GGGCAGGATGTCTCG CCCT AGA AGGG TTTTTGCCTGGATTT TERM 1640 2337025 - 2337035 + G 90 -8.2 -4.8622 | TTGGGGCTGCACCTG GCCG GCT CGGC TTTTTGGTTGGGGGG copCD 2336152 - 2337768 + | copper resistance protein C/D CYA_2333 2340623 - 2337765 - | TPR repeat- and protein kinase domain-containing protein CYA_2335 2341106 - 2340708 - | hypothetical protein TERM 1641 2341571 - 2341532 - g 93 -13.6 -4.11692 | gap 1 CAGCGAGGCGGAAAA CGGCCAGCAAGCCCTGCAG ATG CTGCCAAGCTTGC-AGCCG GATCTGGTCCTGTTG CYA_2336 2341359 - 2342393 + | response regulator CYA_2337 2342432 - 2342749 + | hypothetical protein TERM 1642 2343533 - 2343513 - g 100 -12.5 -4.56597 | opp_overlap 2343510, overlap 2343515 CTCTCCTCTGAAAAA GGGGCTGCC GGT GGCAGCCTC GAATTGATAGGCCCG TERM 1643 2343531 - 2343515 - g 71 -13.7 -2.60032 | opp_overlap 2343510, overlap 2343513 CTCCTCTGAAAAAGG GGCTGCC GGT GGCAGCC TCGAATTGATAGGCC TERM 1644 2343966 - 2343945 - g 70 -10.1 -3.59262 | overlap 2343926 2343920 TCCGACAGCGGCAAA GCTGACGAG GCTC CTCGTCCGC AGCGGCGGCTGGAAT TERM 1645 2344675 - 2344663 - g 80 -5.5 -4.75309 | overlap 2344664 2344667 CCAAAGCCAAGAAAA CCGAG ATC CTCGA TCTGGAGGACATCGA infB 2343138 - 2346233 + | translation initiation factor IF-2 proS 2346336 - 2348165 + | prolyl-tRNA synthetase CYA_2340 2348187 - 2348804 + | hypothetical protein CYA_2341 2348801 - 2349076 + | hypothetical protein CYA_2342 2350231 - 2349173 - | hypothetical protein CYA_2343 2350862 - 2350437 - | ISSoc1, transposase, truncation TERM 1646 2350758 - 2350768 + g 73 -6.8 -4.25104 | CCAACTATTGGACCA CCGA CGC TCGG TTTTGCTGCGCGGCG CYA_2344 2351390 - 2350926 - | hypothetical protein TERM 1647 2351649 - 2351632 - g 74 -2.7 -4.90296 | gap 1, overlap 2351623 AAAACCGGAGAAAAA CTACTCCT GGA AGG-GCAG TGCCAACGCAGGCCG CYA_2345 2351600 - 2351728 + | hypothetical protein TERM 1648 2351931 - 2351947 + T 70 -9.5 -3.53811 | overlap 2351885 2351884 2351934 GTGGGGGGGAGGGGG CAAGGTT CTT AACCTTG TTTGAAACAACTGCA TERM 1649 2352073 - 2352043 - T 100 -11.9 -5.14563 | opp_overlap 2352045, overlap 2352045 TTGGGCAGCAAAAAA GACCCAGCAGAGA AGGGA TCCCTGCTGGGTT TAGGCCGGAGGAGCA TERM 1650 2352071 - 2352045 - T 100 -14.5 -4.20707 | opp_overlap 2352045, overlap 2352043 GGGCAGCAAAAAAGA CCCAGCAGAGA AGGGA TCCCTGCTGGG TTTAGGCCGGAGGAG TERM 1651 2352045 - 2352071 + T 78 -12.3 -3.53012 | opp_overlap 2352045 2352043 GGGCAGCAAAAAAGA CCCAGCAGAGA AGGGA TCCCTGCTGGG TTTAGGCCGGAGGAG tkt 2354095 - 2352095 - | transketolase TERM 1652 2354205 - 2354225 + H 75 -11.1 -3.45033 | opp_overlap 2354190 2354202, overlap 2354194 TGCCTCTAGACAGTT CCTTGAGGC AAG GCCCCAAGG TTCTGCTGGCTTGTC lipA-3 2354507 - 2355397 + | lipoyl synthase CYA_2348 2356699 - 2356031 - | TetR family transcriptional regulator CYA_2349 2357019 - 2357912 + | fatty acid desaturase CYA_2350 2358513 - 2358244 - | hypothetical protein CYA_2351 2358935 - 2358672 - | LuxR family transcriptional regulator CYA_2352 2360345 - 2359086 - | sensor histidine kinase TERM 1653 2360080 - 2360132 + g 76 -6.1 -4.56597 | overlap 2360081 TTCTCGTCTACCCGC AGATATCCCCAGGGCAGGTGGTGGC TGA GATACCGCCAGTCCTGTAGGTATCG TTTTTGGCGGGCCCA CYA_2353 2361190 - 2360426 - | short chain dehydrogenase/reductase family oxidoreductase TERM 1654 2362257 - 2362289 + H 74 -2.7 -5.00616 | gap 1, overlap 2362259 GCCGGGGCAGTTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCTC TTTTTTGAAGCGGGG CYA_2355 2362620 - 2363096 + | ISSoc3, orfA transposase panE-2 2364110 - 2363124 - | 2-dehydropantoate 2-reductase TERM 1655 2364095 - 2364042 - G 79 -9.4 -4.20531 | gap 1, opp_overlap 2364085 2364086 CACACTGACTGAAAA GCCGGCGC-GAGCCAGGCAAACGGC CAAAT GCCCCCCGACTGCCCCGGCGCCGAC GATGCCGATTTTCAT petM 2364240 - 2364133 - | cytochrome b6-f complex subunit PetM TERM 1656 2364365 - 2364351 - H 74 -2.8 -5.00895 | CTCAGGAGAGAAAAA CCGCAA AGA TTACAG TCTGTGAAGATCCCA psbD-1 2364734 - 2365792 + | photosystem II protein D2 TERM 1657 2365847 - 2365900 + F 75 -12.5 -3.17956 | gap 1, overlap 2365848 TTTACGTGAGAGCCG AGGCCGAGCGTTCGCCTATTCAAGTC TTG GA-TTGGATGGGTAGGCGCTCGGCCA TTCCTAAGCTCCTTT TERM 1658 2365848 - 2365899 + F 81 -16 -2.50291 | gap 1, overlap 2365847 TTACGTGAGAGCCGA GGCCGAGCGTTCGCCTATTCAAGTC TTG GA-TTGGATGGGTAGGCGCTCGGCC ATTCCTAAGCTCCTT TERM 1659 2366417 - 2366399 - g 73 -8.2 -4.03586 | opp_overlap 2366416, overlap 2366402 2366405 2366407 CTGGAAAGACAAGAA CAAGATGA CCA CCATCTTG GGGATCCACCTCATC psbC 2365935 - 2367356 + | photosystem II 44 kDa subunit reaction center protein TERM 1660 2367388 - 2367405 + F 100 -14.1 -5.42259 | opp_overlap 2367384 GAGATCACAACCTTT GGCCCCC GGCA GGGGGCC TTTTTTTGGGGATCC TERM 1661 2367499 - 2367520 + G 72 -4.4 -4.62069 | overlap 2367507 CAAGATGCACAAAGT TCCGGTTA CGGTCA TCACCGGA TTTTTGGGATCCGGC cobW 2367488 - 2368546 + | cobalamin biosynthesis protein CobW CYA_2361 2369564 - 2368608 - | NAD-dependent epimerase/dehydratase family protein TERM 1662 2368789 - 2368802 + g 81 -3.8 -5.0538 | ATGGGCAGGGGCAGG CGGA AATAAA TCCG TTTTTTAAAATAGGC TERM 1663 2368983 - 2368968 - G 72 -4 -4.60041 | gap 1, overlap 2368969 2368970 ATCCACCCGCAAAAA GC-GGAT CAA ATCCAGC CAGCGGAGCACCTCC TERM 1664 2369888 - 2369906 + G 86 -7.4 -4.77036 | GGTGCCGGTGCTGCT GCTGATCA CGG TGCTCAGC TTTTTGCTCCTGCAA TERM 1665 2369923 - 2369935 + G 82 -3.3 -5.10497 | TTTTGCTCCTGCAAC TGGCC CCC GGCGA TTTTTTGGATCCCTT TERM 1666 2370125 - 2370156 + G 76 -7.2 -4.30978 | gap 1 CATCCTCTCCCGCGC CGGCGCCACCCTGCT GTT GGCAGTGTG-CTCCG TTTTGCTGACTTGGA TERM 1667 2370265 - 2370285 + G 73 -6.8 -4.32034 | overlap 2370252 2370260 ACCTGGGGCAGGCCA TGCCCAGC TTTGT GCTGGCCA TTTTGCTGCTGATCG CYA_2362 2369787 - 2370812 + | OppBC ABC transporter family permease TERM 1668 2371317 - 2371354 + G 86 -8.3 -4.60889 | overlap 2371326 GCGACAAGAATGGCA GGAGCGCTTCGGGGATC CCCC GTTTCTCGGGGCGCTGC TTTTTGCAGATGATT TERM 1669 2371326 - 2371338 + G 76 -10.5 -3.86015 | overlap 2371317 ATGGCAGGAGCGCTT CGGGG ATC CCCCG TTTCTCGGGGCGCTG TERM 1670 2371998 - 2371975 - g 77 -2.4 -4.97402 | gap 1, overlap 2371978 GAAAAGTTAGAAAAA GAAGCCAAGGA AAT CCCTCAGCT-C TTCGATGTTATTTTG TERM 1671 2371996 - 2371978 - g 74 -5.2 -4.55383 | overlap 2371975 AAGTTAGAAAAAGAA GCCAAGGA AAT CCCTCAGC TCTTCGATGTTATTT CYA_2363 2370850 - 2373006 + | hypothetical protein CYA_2364 2373751 - 2373011 - | hypothetical protein TERM 1672 2373691 - 2373633 - G 85 -14.5 -3.64822 | gap 2 ATGCCCGTAGCCAAA GCGGCTGCCCCCGACTGCCACAGGGATCC GCC GGATCCC-A-GGCTGCCGAGGGCCACGGC AAGGCCAGCCAAAGC fabD 2374745 - 2373876 - | malonyl CoA-acyl carrier protein transacylase TERM 1673 2374377 - 2374400 + g 75 -13.8 -3.06796 | AATCAGCGCCGCCAT GCTGCCGGGG GGAT CCCCTGCAGC TTCCATCAACTGGCC fabH 2375772 - 2374765 - | 3-oxoacyl-(acyl-carrier-protein) synthase III plsX 2376869 - 2375778 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 1674 2376923 - 2376908 - R 71 -4.6 -4.60797 | opp_overlap 2376909, overlap 2376909 TCCTGACAGATAAAA TGCGGA GATC TCCGCT GCTCCTCTGCCTCGA CYA_2368 2379085 - 2377352 - | hypothetical protein TERM 1675 2377822 - 2377832 + g 74 -2.4 -4.91109 | CCAGCTCCTCGTATT CCCG TTG CAGG TTTTTCTCCTGAGGC TERM 1676 2379243 - 2379215 - H 75 -8.8 -4.07568 | opp_overlap 2379215 CCCGGGGCGCGAAAA CCTGCGTCAAGC CTCTC GCTTGACCCGGG TTGACTTGGATCTGT TERM 1677 2379215 - 2379243 + H 71 -11 -3.20432 | opp_overlap 2379215 CCCGGGGCGCGAAAA CCTGCGTCAAGC CTCTC GCTTGACCCGGG TTGACTTGGATCTGT TERM 1678 2379408 - 2379392 - H 100 -2.9 -5.92337 | opp_overlap 2379397 2379398 ATAGAGTAAAAAAAA CACCTTT GCC AGAGGCG GTTTGGGGATATTCG trpC 2379498 - 2380418 + | indole-3-glycerol-phosphate synthase CYA_2370 2380459 - 2380698 + | hypothetical protein TERM 1679 2380699 - 2380718 + F 79 -12.2 -3.60296 | CAGCCACCCTCTTGA CCTTCCAG CCCA CTGGAAGG TTTAGCATCAAGCTG CYA_2371 2380763 - 2380957 + | copper metallochaperone TERM 1680 2381552 - 2381564 + G 75 -3.3 -4.91109 | CGCCGGTGCAGTTTT GGGTG GGC CAGCC TTTTTATCGTGGCGC CYA_2372 2381068 - 2383401 + | copper-translocating P-type ATPase cbiX 2383610 - 2384638 + | sirohydrochlorin cobaltochelatase TERM 1681 2384780 - 2384806 + F 77 -8.6 -4.21439 | TCCTCTTGGGTCTCA GGTGCCGCTGCC GCG GGGAGCGGGATC TTTGTCTTCGCGTTG TERM 1682 2385390 - 2385372 - g 86 -11.8 -4.20918 | overlap 2385357 2385356 TGGAACTCCAAGAAA TCCAACTG CAG CAGTTGGA GGTGAGGCGGACTCG CYA_2375 2384822 - 2385643 + | hypothetical protein CYA_2374 2386257 - 2385640 - | PAP/fibrillin family protein CYA_2376 2387020 - 2386313 - | Sua5/YciO/YrdC/YwlC family protein CYA_2377 2387377 - 2387042 - | hypothetical protein obgE 2388509 - 2387352 - | GTPase ObgE TERM 1683 2387906 - 2387885 - GH 71 -12.3 -2.84325 | overlap 2387882 2387880 TGTCGGCAAACACCA CCCCATCCC CGGC AGGATGGGG CACCACTCCCAAATT TERM 1684 2388136 - 2388124 - GH 83 -9.1 -4.36914 | TGGTTGCTGAGAAAA TGGGC ATT GCCCA GGCCGCCTTTCCCGC TERM 1685 2389004 - 2388979 - g 93 -9.7 -4.67982 | CCTCACCGAAGAAAA TGAAGAGGGGC AACT GACCCTCTCCA TCCGCCGCATCGAGT rpsA 2388710 - 2389681 + | 30S ribosomal protein S1 CYA_2380 2389689 - 2389793 + | hypothetical protein CYA_2381 2389808 - 2391094 + | resolvase family site-specific recombinase TERM 1686 2391311 - 2391299 - f 91 -4.8 -5.58051 | overlap 2391310 AAACAAAAAACAAAA GCTG ATAAA CAGC TAAAATCTAGCTCTA TERM 1687 2392296 - 2392283 - g 71 -5.9 -4.38712 | opp_overlap 2392288, overlap 2392285 CGGACTTTTACAAAA CCCCC GTGC GGGAG CCGGCGCTGGTGTAA chlL 2391460 - 2392311 + | protochlorophyllide reductase iron-sulfur ATP-binding protein TERM 1688 2393229 - 2393213 - g 91 -2.9 -5.40072 | CTGGTTTCAAAAAAA CATCACC GGT GGCTATG TCTCCCAGGAGCTGG CYA_2383 2392470 - 2393447 + | protochlorophyllide oxidoreductase TERM 1689 2393585 - 2393596 + G 75 -4.4 -4.77036 | CTCTACCCCAAAATC GAAG ACAG CTTC TTTTTGGTGATCGGC TERM 1690 2394058 - 2394041 - g 82 -5.5 -4.85782 | overlap 2394043 2394047 TCCGGCAAAAAGAAA GAGGAAG AGGG CTTCCAC CCCCACCCGCCGCTG chlN 2393477 - 2394877 + | light-independent protochlorophyllide reductase subunit N CYA_2384 2395110 - 2394874 - | hypothetical protein TERM 1691 2395223 - 2395184 - R 84 -7.1 -4.8667 | gap 1, opp_overlap 2395184, overlap 2395138 GAGAGGGGAGAAAAA CCCTAGAGCGTGCGC-AG CACCT CTCGCGCTGCCTCTAGGG TTCTCTCCACATCGG hemL 2396496 - 2395186 - | glutamate-1-semialdehyde aminotransferase TERM 1692 2396031 - 2396020 - G 75 -4.4 -4.72272 | GGCCTTGACCAAAAA CATG TCCG CATG GCCGTGGTAGCAGCC TERM 1693 2396203 - 2396220 + g 74 -9.1 -3.85698 | opp_overlap 2396213 TTCCAAAACGCAAGG GGCGCCA AAGC TGGTGCC TTTCTCCAGGGCCCG ispG 2397813 - 2396575 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1694 2398024 - 2398008 - R 70 -10.1 -3.40788 | AGTCAAGCCAATCAA CTGCCCC AGG GGAGCAG GATCACTCTCGATGA CYA_2388 2399060 - 2398539 - | hypothetical protein TERM 1695 2398746 - 2398764 + g 74 -2.3 -4.82901 | AATGGCATCGCTGGG GCGGCAG TCGAT CTCCTGC TTTTTATCGCCGCAG cobK 2399147 - 2399950 + | cobalt-precorrin-6x reductase CYA_2389 2400264 - 2399908 - | single-strand DNA-binding protein TERM 1696 2401530 - 2401542 + G 78 -6.9 -4.56597 | CATCGCCTGGACAGG GGCTG GCA CGGCC TTTTTGGGGGCCAGC TERM 1697 2401597 - 2401587 - g 74 -2.4 -4.85177 | AAACGACATCAAAAA GGGC CTG GCCT ACTCCACCATTTCCC TERM 1698 2402586 - 2402598 + G 76 -10.5 -3.85698 | CGAGCGGGTCTTTGT GCGGG GCA CCCGC TTTGTGGCGCGGGAG CYA_2391 2400637 - 2402787 + | NAD(P)H-quinone oxidoreductase subunit F CYA_2392 2402868 - 2403461 + | ISSoc2, resolvase TERM 1699 2404561 - 2404584 + GTF 70 -11 -3.04461 | AATGCTATCGCTTCA CCGCTGAGCA GTAA TGCTCAGCAG TGTTCAGCGTAAATG CYA_2393 2403316 - 2404596 + | ISSoc2, transposase CYA_2394 2405869 - 2405090 - | DNA-binding response regulator TERM 1700 2405664 - 2405645 - Gf 70 -10 -3.40163 | overlap 2405598 GAGGAGCAAGATCAA CACATCGC AATG GCGATGCG CCCACCGGCATAGTT TERM 1701 2406053 - 2406071 + Gr 78 -3 -5.06414 | overlap 2406052 AAACGCCAGAGGGAT CCGCAC CGGATTT GAGCGG TTTTTCTTCGAGCAC TERM 1702 2406894 - 2406943 + Gr 78 -6.3 -4.57073 | gap 1 CGAGGGCGGGCCCAG GCGGTGGTGGACAGCTTC-CGAGC CGT GATCGAGGAGCTGAGGATCGCCGC TTTTTGCACCGGATC fni 2405868 - 2407043 + | isopentenyl pyrophosphate isomerase CYA_2396 2408917 - 2407304 - | hypothetical protein CYA_2398 2409318 - 2409118 - | hypothetical protein CYA_2399 2409985 - 2409290 - | hypothetical protein CYA_2400 2410282 - 2410488 + | hypothetical protein CYA_2401 2410355 - 2412211 + | S8A family peptidase CYA_2402 2412211 - 2412432 + | hypothetical protein TERM 1703 2412450 - 2412475 + T 100 -11.1 -5.40474 | opp_overlap 2412449 2412448 2412446, overlap 2412451 2412452 AACCCGATAAACAGC CTGGGATCCCC GCCT GGGGATCCCGA TTTTTTTAGAGAGCT TERM 1704 2412451 - 2412474 + T 91 -14.6 -3.83561 | opp_overlap 2412449 2412448 2412446, overlap 2412450 2412452 ACCCGATAAACAGCC TGGGATCCCC GCCT GGGGATCCCG ATTTTTTTAGAGAGC TERM 1705 2412452 - 2412473 + T 83 -15.9 -2.89655 | opp_overlap 2412449 2412448 2412446, overlap 2412451 2412450 CCCGATAAACAGCCT GGGATCCCC GCCT GGGGATCCC GATTTTTTTAGAGAG CYA_2403 2412893 - 2412534 - | pentapeptide repeat-containing protein CYA_2405 2415662 - 2414646 - | putative adenylate cyclase TERM 1706 2415861 - 2415872 + G 72 -2.2 -4.72272 | GTATGCAGAGCTGAG GGAG TCTT TTCC TTTTTCCTGGCCCGC CYA_2406 2415796 - 2416281 + | hypothetical protein TERM 1707 2416664 - 2416681 + G 72 -7.7 -4.13654 | CTTGCGCGTTCGCCA TCTCAGC GTCG GCTGGGA TTTCTGCTTTGGCCA ribF 2416329 - 2417261 + | riboflavin biosynthesis protein RibF cobS 2418088 - 2417309 - | cobalamin synthase CYA_2409 2418465 - 2418121 - | hypothetical protein TERM 1708 2418272 - 2418283 + g 80 -5.8 -4.72986 | ATCTCGATCAGCGTC TGCC CTTC GGCA TTTTTGATCAGAATG rpoD 2419740 - 2418526 - | RNA polymerase sigma factor RpoD metH 2420392 - 2424051 + | methionine synthase potC 2424829 - 2424056 - | spermidine/putrescine ABC transporter, permease protein PotC TERM 1709 2424908 - 2424896 - R 71 -4.7 -4.57073 | overlap 2424898 GATCTGCCGGAAAAA GCGGC CGC GCTGC CAGCCTACCTCCCTC CYA_2413 2425949 - 2425128 - | alpha/beta fold family hydrolase CYA_2414 2426199 - 2426047 - | hypothetical protein CYA_2415 2426688 - 2426212 - | ISSoc3, orfA transposase TERM 1710 2427051 - 2427019 - R 89 -8.5 -5.00616 | gap 1, opp_overlap 2427018 CCTCGCTTCAAAAAA GCGGGGGAGT-TGA GATCCT TCACATTCCCCCGC ATCAATTGCCCCAAG TERM 1711 2427186 - 2427167 - R 78 -6.4 -4.72272 | GGTTTGTACCAAAAA CCTGCACA GTGG TGCGCAAG GCCGATGGGTGGTAT CYA_2417 2428911 - 2427961 - | LysR family transcriptional regulator CYA_2418 2429828 - 2429181 - | hypothetical protein TERM 1712 2430032 - 2430073 + r 77 -12.3 -3.29263 | gap 1 CTCGTTACGTTATTT CCTAGCTCCCCTCTCCCTCT GGG AGAGGG-GACGGGGGTGAGG TTGTCCAAAGAATCT yqeG 2430578 - 2430090 - | HAD family phosphatase CYA_2420 2431743 - 2430622 - | hypothetical protein pyrH 2432628 - 2431864 - | uridylate kinase CYA_2422 2432879 - 2432727 - | hypothetical protein CYA_2423 2433358 - 2432987 - | hypothetical protein CYA_2424 2434626 - 2433346 - | ISSoc2, transposase CYA_2425 2435074 - 2434481 - | ISSoc2, resolvase TERM 1713 2435349 - 2435329 - R 72 -9.8 -3.56727 | opp_overlap 2435326 CCGAAGTAAGCAGAA CTTTGAGG TTATG CCTCAAAG GACTGTCTAGAGGCG psbJ 2436955 - 2436836 - | photosystem II reaction center protein J psbL 2437221 - 2437096 - | photosystem II reaction center protein PsbL psbF 2437370 - 2437227 - | cytochrome b559 subunit beta psbE 2437699 - 2437454 - | cytochrome b559 subunit alpha CYA_2431 2438016 - 2439716 + | S-layer domain-containing protein CYA_2432 2441761 - 2440022 - | putative exopolyphosphatase TERM 1714 2441160 - 2441148 - G 78 -3.3 -5.00616 | TCGTGGTGCAAAAAA GCTTG GGT CAGGC GCACCGCCCCCACCT TERM 1715 2441536 - 2441548 + g 78 -6.9 -4.56775 | overlap 2441512 TGCAGAATTCCCCCA GCCGC ACG GTGGC TTTTTCGCGGGAGAT thrS 2441939 - 2443750 + | threonyl-tRNA synthetase TERM 1716 2443862 - 2443850 - g 74 -2.6 -4.86731 | opp_overlap 2443852 2443852 2443854 2443856, overlap 2443851 2443852 2443854 CCTTTCTAAAGAAAA GCCA GCCGA CGGC CGTGTTGACGGCCCG CYA_2434 2443789 - 2444127 + | carbohydrate ABC transporter ATP-binding protein TERM 1717 2444926 - 2444962 + G 74 -2.2 -4.84761 | CCAAGCTGTCGATGG GAGATATTCACTTCTC GCAAG GGGATGGGGAGATCTC TTTTTGTGGCGCTAT CYA_2435 2444148 - 2445353 + | acetamidase/formamidase family protein TERM 1718 2445906 - 2445896 - f 76 -5.4 -4.83615 | TAGTGCTTAGAAAAA GAGA GAC TCTC ACAATACCCCCAGAA TERM 1719 2446332 - 2446350 + G 72 -4.5 -4.63184 | gap 1, overlap 2446333 2446334 GAAAACGTGGTTCTT GG-GGCCG AACC CGGCCATC TTTTTCAGGTCGATT TERM 1720 2447123 - 2447111 - g 71 -6.2 -4.32034 | opp_overlap 2447111 GGATCACCATCAAAA GCCG TATAC CGGC TGGTTGGGATTTTTT CYA_2437 2445984 - 2447531 + | carbohydrate ABC transporter ATP-binding protein malQ 2449129 - 2447528 - | 4-alpha-glucanotransferase TERM 1721 2448133 - 2448145 + g 74 -4.7 -4.59773 | opp_overlap 2448131, overlap 2448131 2448134 GCGCCTGAAAGAAGT CGGCC CCC GGCCC TTTTTGCCACTCGCC pyrE 2449941 - 2449285 - | orotate phosphoribosyltransferase TERM 1722 2450047 - 2450027 - H 72 -9.8 -3.56727 | opp_overlap 2450024 CCGAAGTAAGCAGAA CTTTGAGG TTATG CCTCAAAG GACTGTCTAGGGGCG CYA_2439 2450193 - 2450786 + | ISSoc2, resolvase TERM 1723 2451763 - 2451785 + GT 72 -9.8 -3.55444 | overlap 2451757 2451762 CGAGATTGGCAAGGC GCCCTGGGTG TTA TGCTCAGGGC TTTGCGGGATACCGC TERM 1724 2451886 - 2451909 + GT 70 -11 -3.04461 | AATGCTATCGCTTCA CCGCTGAGCA GTAA TGCTCAGCAG TGTTCAGCGTAAATG CYA_2440 2450641 - 2451921 + | ISSoc2, transposase CYA_2441 2452448 - 2451933 - | MarR family transcriptional regulator CYA_2442 2452761 - 2452624 - | hypothetical protein TERM 1725 2453110 - 2453125 + Gr 78 -3.2 -5.01732 | gap 1 AGGATTCCCCCTACG CCGTGGC CTT GTC-CGG TTTTTTGCAGGGATT CYA_2443 2454224 - 2454051 - | hypothetical protein CYA_2444 2452833 - 2454146 + | hypothetical protein yfiA 2455057 - 2454482 - | ribosomal subunit interface protein TERM 1726 2454754 - 2454769 + g 83 -9 -4.32857 | overlap 2454750 AATGGCGGATGCGGT GAACGC CGTT GCGTTC TTTATATTTGCGCAG TERM 1727 2455012 - 2455028 + g 80 -5.8 -4.75174 | CGTAGCTGCGGATGG CGTCGG TAATC TCGACG TTTTTCCCTTGGATC TERM 1728 2455578 - 2455599 + H 71 -4.3 -4.59773 | opp_overlap 2455582, overlap 2455579 2455582 ACTTGTGGCCATTAT ACAACCTGG TGAG CCAGGGTGC TTTTTCCAGCTCAGA TERM 1729 2456496 - 2456479 - g 74 -2.6 -4.86621 | opp_overlap 2456495, overlap 2456480 2456483 ATCCCTAATCAAAAA TCCAGG CGGCAC CCTGGC CCCGGCGGGGGGCTA CYA_2446 2455787 - 2457031 + | aluminium resistance protein CYA_2447 2457021 - 2457923 + | hypothetical protein CYA_2448 2458260 - 2458475 + | hypothetical protein CYA_2449 2458518 - 2458820 + | hypothetical protein CYA_2450 2459488 - 2458904 - | S-layer domain-containing protein TERM 1730 2459481 - 2459470 - G 70 -7.2 -4.07568 | overlap 2459471 GGGTCTGCGGGAAAA CGGC GGTG GCCG GAGCCATCGACAGCC CYA_2451 2459743 - 2459537 - | hypothetical protein TERM 1731 2460055 - 2460065 + G 73 -8.2 -4.08945 | GAGGTCCTGCGGCAG GCCG AAG CGGC TTTTCAAACCGTGAT CYA_2453 2459752 - 2460189 + | TPR repeat-containing protein CYA_2452 2460364 - 2460170 - | hypothetical protein thrC-2 2461535 - 2460477 - | threonine synthase CYA_2455 2463218 - 2461689 - | isochorismate synthase TERM 1732 2462780 - 2462752 - G 79 -8.8 -4.35524 | overlap 2462745 GGGGCAAAGCCAAAA CGGCAGAAGCAC AAAGG GCGCTCCTGACG GCTGCTTGGGGACTC TERM 1733 2463345 - 2463360 + H 74 -6.8 -4.43877 | gap 1 GCTCAGGCTCGCCAG CGCC-GG ATC CCAGGCG TTTCTTTACGGATTG TERM 1734 2463826 - 2463838 + G 72 -2.6 -4.81249 | GGTTCAGGTGTTTTG GGTG GGCAA CGCC TTTTTGGCTTTGGGG TERM 1735 2463977 - 2463993 + G 77 -2.1 -5.09426 | overlap 2463979 2463980 CTGGGCTACTACGGC CTGGGGG AGC TCCTCTG TTTTTTGAGCTTCGG TERM 1736 2464071 - 2464044 - g 76 -11.3 -3.727 | overlap 2464050 CCCACTACAGCCAAA GCCAAAGCTGG TCGCTG CCAGCCCTGGC GGCCTCACTGGTGGT menA 2463470 - 2464447 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase CYA_2457 2464589 - 2466427 + | hypothetical protein TERM 1737 2466666 - 2466679 + G 93 -8.1 -4.96848 | GGGCACGGTGATGAT GCTGG GCAA CCAGC TTTTTATCTACGCCG TERM 1738 2466722 - 2466712 - g 77 -2.4 -5.00616 | TTGCTGGTGAAAAAA GGCG CCC CTCC CCTGACAATTTTGCA TERM 1739 2467431 - 2467452 + G 81 -2.2 -5.15117 | GGAGTACCACCTCAA GTTCGCCA TTCCCT TGGCCAGC TTTTTTGCCATTTTG CYA_2458 2466505 - 2467683 + | YjgP/YjgQ family protein TERM 1740 2468398 - 2468410 + G 70 -10.5 -3.61398 | GCGGGAACTGGAATT GGGGC GGC GCCCC TTCTTCCACCGGCAC TERM 1741 2468711 - 2468679 - g 80 -14.9 -3.14344 | TACCTTGCCGAGCAA GACCTGGGCATTGCC GAG GGGAACGCCCAGATC CAGTTGGCCGACGGC TERM 1742 2470464 - 2470451 - g 72 -3.7 -4.64766 | opp_overlap 2470459, overlap 2470452 GGCAGAGGTGAAAAA CCTGG TGCG CCTGG ACACCAGCCTTGGCT CYA_2459 2467680 - 2471015 + | hypothetical protein CYA_2460 2471113 - 2472348 + | L,L-diaminopimelate aminotransferase CYA_2461 2472469 - 2473437 + | oxidoreductase, NAD-binding CYA_2462 2474020 - 2473466 - | putative iron-sulfur cluster-binding protein CYA_2463 2474291 - 2474013 - | hypothetical protein CYA_2464 2474977 - 2474426 - | DNA protection protein TERM 1743 2475144 - 2475133 - H 74 -7.2 -4.25104 | CTGGTTGTAGCAAAA CCGG TGGG CCGG TCAGGGAGGAGTCGC TERM 1744 2476105 - 2476134 + G 72 -7.9 -4.20368 | CCTCTGTTGGTGGCT GCTCAGATTGGCA TGAT TGCCAATATCAGC TTTATCTTCGGCTAC CYA_2465 2475226 - 2476479 + | GTP-binding protein CYA_2466 2477509 - 2476487 - | glycosyl transferase, group 2 family protein hslO 2478521 - 2477559 - | Hsp33-like chaperonin TERM 1745 2478665 - 2478688 + H 71 -4.6 -4.62069 | gap 1 TTATCCCCCTGCCCA CTAGC-CAGCA GCT TGCTCCGCTAG TTTTTCGGCTCAAAG TERM 1746 2478956 - 2478969 + G 72 -3.7 -4.59853 | GTCGCTGGCGGGAAC GCGCC TACA GCCGC TTTTTGCAGGATTGG CYA_2468 2478895 - 2479182 + | hypothetical protein CYA_2469 2479464 - 2479952 + | Mov34/MPN/PAD-1 family protein CYA_2470 2480163 - 2480444 + | ThiS domain-containing protein CYA_2471 2480447 - 2481610 + | hypothetical protein ribAB 2481734 - 2483035 + | riboflavin biosynthesis protein RibA CYA_2472 2483449 - 2483024 - | hypothetical protein CYA_2474 2484572 - 2483586 - | GntR family transcriptional regulator CYA_2476 2486028 - 2486582 + | DoxX family protein ppk 2488672 - 2486621 - | polyphosphate kinase CYA_2478 2489813 - 2488854 - | hydrophobic amino acid ABC transporter permease TERM 1747 2489595 - 2489571 - G 76 -11.4 -3.73534 | overlap 2489559 CAAGCCGATCAAGAA GGCGATCGCC CCGGC GGCGACCACC GCCATGGCAAAGCCC CYA_2479 2490670 - 2489813 - | hydrophobic amino acid ABC transporter permease CYA_2480 2490776 - 2491777 + | putative lipoprotein TERM 1748 2492523 - 2492543 + G 72 -3.9 -4.61873 | overlap 2492526 GCCCGCCGCCAGTTG GATGGGC AAGCGCC GCCCTTC TTTTGCTTTGTCAAC CYA_2481 2491860 - 2493524 + | sulfatase CYA_2482 2494016 - 2493528 - | hypothetical protein TERM 1749 2493746 - 2493759 + g 74 -5.2 -4.63486 | opp_overlap 2493738 2493741, overlap 2493741 GGTCAAACCAGCAGC GGGC CCAGTT GCCC TTTTCTTCCAAGGAT TERM 1750 2494495 - 2494517 + G 76 -13.4 -3.17075 | CACCGGAGCCAGCCG GGGCATTGGC CGG GCCATTGCCC TTCACTTGGGGGCGA fabG 2494430 - 2495191 + | 3-oxoacyl-(acyl-carrier-protein) reductase ggt 2496843 - 2495197 - | gamma-glutamyltransferase TERM 1751 2496292 - 2496279 - G 75 -3.1 -4.86731 | gap 1, overlap 2496280 2496281 CTTGGGGAAAGAAAA CGGCCT TGA AGGC-G TCGTGGCGGGGATCT CYA_2485 2497573 - 2496881 - | HAD family hydrolase CYA_2486 2498335 - 2497673 - | hypothetical protein secG 2498589 - 2498350 - | preprotein translocase subunit SecG CYA_2488 2499093 - 2499383 + | hypothetical protein panB 2500210 - 2499425 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1752 2501186 - 2501200 + G 88 -4.2 -5.28983 | overlap 2501185 CGGCCCGGCGATGAG GCGG AAGCCGA CCGC TTTTTGTATTTTGCC pcyA 2500691 - 2501431 + | phycocyanobilin:ferredoxin oxidoreductase CYA_2491 2502273 - 2501428 - | hypothetical protein prmA 2502828 - 2503613 + | ribosomal protein L11 methyltransferase TERM 1753 2503823 - 2503835 + GF 74 -6.2 -4.48299 | overlap 2503813 GTGGAGGCGCTGCCG CGGG AGCTG CCCG TTTATTTGCATCTGG CYA_2494 2503583 - 2504401 + | hypothetical protein TERM 1754 2504449 - 2504428 - f 86 -5.1 -5.21709 | gap 1, overlap 2504432 GTTGATAGGAAAAAA CTGACGCCGA CCA TTGGCG-CAG CAAGCCGTGGTTCTG hisS 2504482 - 2505741 + | histidyl-tRNA synthetase TERM 1755 2506619 - 2506602 - g 76 -6.9 -4.45068 | opp_overlap 2506575, overlap 2506598 2506603 AGCGGCAAGAAGAAA CGCCAGC CGCA GCCGGCA GTTCTTCCCCGCCCT CYA_2496 2505749 - 2507278 + | hypothetical protein CYA_2497 2508129 - 2507293 - | universal stress protein TERM 1756 2507404 - 2507450 + g 71 -5.6 -4.31433 | overlap 2507409 GATGCTGCGGGCAAT GCTGGGCCGGCGATCTGGGGAT CCC ATCACCAGCAGGTCGGCTTTGC TTTCTTCTGCCAATC CYA_2498 2509130 - 2508231 - | hypothetical protein TERM 1757 2508716 - 2508702 - G 82 -5.6 -4.85599 | CTGAGCTGAGAAAAA GGGATC CCC GTTCCC CCAAGTATGGCGCAG CYA_2499 2510295 - 2509159 - | putative lipoprotein CYA_2500 2511791 - 2510292 - | hypothetical protein TERM 1758 2510819 - 2510791 - G 74 -5.1 -4.57341 | overlap 2510792 AAGGGCGCCCAAAAA CCCGACTCTTGGC TTA GCCCATAGCCGGC GGTCAAGCAGTTCAG TERM 1759 2511307 - 2511278 - G 73 -6.3 -4.25283 | overlap 2511283 AGCCTGCCACCAAAA GCGAAGCCCAGCG AAAC CCCCAGGATTCGC GGCGAAAAGCCAATA CYA_2501 2512198 - 2512599 + | mannose-6-phosphate isomerase family protein TERM 1760 2512756 - 2512738 - f 70 -3 -4.74285 | AGCCAGAAGAGAAAA CAATGGGC GCT GCTCGTTG CCAGTTTGCTGTGCT CYA_2502 2512762 - 2514654 + | hypothetical protein TERM 1761 2515046 - 2515031 - f 74 -11.8 -3.08679 | opp_overlap 2515030 2515031 CGTGGCCACTGAAGA GCCGGG CTAC CCCGGC GTTTGGCAGGCTGTG TERM 1762 2515031 - 2515046 + F 71 -11.8 -2.72829 | opp_overlap 2515031, overlap 2515030 CGTGGCCACTGAAGA GCCGGG CTAC CCCGGC GTTTGGCAGGCTGTG TERM 1763 2516663 - 2516687 + G 74 -2.7 -4.9218 | overlap 2516665 2516666 2516668 CTTCTTCACCTTCCT CACCAGCCCCA TTA TGTGGCTGCTC TTTTTCTACTGGCTG CYA_2503 2515200 - 2517008 + | glycosyl transferase, group 2 TERM 1764 2517013 - 2517000 - T 72 -3.8 -4.68424 | opp_overlap 2517000 GAAGCCACCCAAAAA GCAG GCTAGG CTGC TGACTTGGCTTTCCA CYA_2504 2517425 - 2517066 - | hypothetical protein CYA_2505 2517430 - 2517528 + | hypothetical protein TERM 1765 2517609 - 2517584 - T 100 -11.1 -5.30686 | opp_overlap 2517584 AAGAGTTACAAAAAA GGGATCCCGAC CAGA GCGGGGATCCC TTGATCAGAGTAGGG phoD 2519407 - 2517680 - | alkaline phosphatase TERM 1766 2518579 - 2518568 - G 85 -5.8 -5.08824 | GCTGTATTCAAAAAA GGCT TGGT AGCC TAACACTCGAAGATC clpS-2 2519672 - 2519953 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1767 2520031 - 2520041 + GT 76 -8.2 -4.14739 | overlap 2520030 2520038 CCTGTTGCTGTTTTT GGGG ATC CCCC TTTTGGCCTGGCTGC TERM 1768 2520038 - 2520076 + GT 91 -5.2 -5.27335 | gap 1, overlap 2520030 2520031 CTGTTTTTGGGGATC CCCCTTTTGGCCTGGCT GCCGTG GGTC-GGCCTAGGGGGG TTTTTCTTTGGGCGA CYA_2508 2520823 - 2520713 - | hypothetical protein CYA_2509 2519969 - 2520763 + | CAAX amino terminal protease family protein CYA_2510 2522311 - 2520824 - | solute/sodium symporter (SSS) family protein TERM 1769 2521348 - 2521335 - G 74 -9.5 -3.83026 | opp_overlap 2521335 GCCGTGGACATCAAA GCCGC CAGC GCGGC TGTAATCACCACTGC CYA_2511 2522534 - 2522304 - | hypothetical protein dprA 2522681 - 2523826 + | DNA protecting protein DprA TERM 1770 2524416 - 2524429 + F 72 -3.9 -4.78077 | opp_overlap 2524414 AAAAACAAGAATGCG GTTTT AACC AAAAC TTTGTTTTCATTCCA TERM 1771 2524600 - 2524577 - f 76 -6.6 -4.60889 | overlap 2524578 AATTATGGTGAAAAA CCCGACGGGT GGAG ACCCGCTGGA AAGCGTGTCAAGCGG hisA 2524851 - 2525636 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 1772 2525809 - 2525787 - f 77 -11.4 -3.55444 | GCGGTATCCCGCAAA GCTTTGAGTA GAA TACCCAAAGC GCAGTTTCCGTGTCG TERM 1773 2527052 - 2527064 + G 80 -5.5 -4.72272 | GATGACCATGGGCGG CGAGG ACG TCTCG TTTTTCCTCAACGAG CYA_2514 2526051 - 2527241 + | M20D family peptidase CYA_2515 2527972 - 2527385 - | hypothetical protein TERM 1774 2527720 - 2527694 - G 70 -10.1 -3.6502 | CAGTTGCCAGTCAAA GCGGTCGGTAG GAGAG CGACCGACCAC CTGCAAGTGATAGAC TERM 1775 2528091 - 2528105 + r 84 -2.8 -5.47218 | ATGGACATGAACCAT TCTAAG CTG CATAGA TTTTTTTGGCTCAGC CYA_2516 2529896 - 2528172 - | hypothetical protein CYA_2517 2530489 - 2529896 - | hypothetical protein CYA_2518 2531679 - 2530486 - | hypothetical protein TERM 1776 2530874 - 2530859 - G 100 -6 -5.76633 | GCACAGATAAAAAAA GGGGTG CGCT CCCCCC ACTCCAGCCACGGGC CYA_2519 2535265 - 2531669 - | RecF/RecN/SMC domain-containing protein CYA_2520 2536536 - 2535268 - | Ser/Thr protein phosphatase family protein TERM 1777 2537178 - 2537195 + G 76 -9.1 -4.0641 | overlap 2537177 TTCTCCGCTCACTTC GGCCACC TGGC GGTGGTC TTTGTCTGGCTGAGC psaA 2536947 - 2539214 + | photosystem I P700 chlorophyll a apoprotein A1 TERM 1778 2539652 - 2539688 + G 78 -10 -4.08557 | opp_overlap 2539640 CAACGGCGATCTCTA CGCCGGCGCCATCGGC CTGTT GTTGTTGGCGGCGGTG TTCTTGTTTGCCGGC TERM 1779 2540197 - 2540171 - g 82 -14.5 -3.28712 | gap 1, overlap 2540172 CCTGGGCGCCCACAA CCCGCCGAAGGG CACC CCCTTCGG-GGG CCTGCTGGGCGAAGG TERM 1780 2540197 - 2540172 - g 74 -14.7 -2.57132 | overlap 2540171 CTGGGCGCCCACAAC CCGCCGAAGGG CACC CCCTTCGGGGG CCTGCTGGGCGAAGG psaB 2539236 - 2541473 + | photosystem I P700 chlorophyll a apoprotein A2 TERM 1781 2541499 - 2541519 + T 100 -12.6 -5.55664 | opp_overlap 2541499 TGGCTAAGCAACTAA GGGATCCC GCGGG GGGATCCC TTTTTTTGCTCCTCG TERM 1782 2541519 - 2541499 - T 79 -12.6 -3.45366 | opp_overlap 2541499 TGGCTAAGCAACTAA GGGATCCC GCGGG GGGATCCC TTTTTTTGCTCCTCG TERM 1783 2541885 - 2541865 - T 100 -12.5 -5.03145 | opp_overlap 2541860 2541858 2541865 TAATCCGGCAAAAAA GCCCAGCTC TGA GGGCTGGGC TTGGATATTTCAAGA TERM 1784 2541865 - 2541885 + T 83 -14.7 -3.24021 | opp_overlap 2541865, overlap 2541860 2541858 TAATCCGGCAAAAAA GCCCAGCTC TGA GGGCTGGGC TTGGATATTTCAAGA CYA_2523 2543251 - 2541914 - | hypothetical protein TERM 1785 2543547 - 2543565 + H 87 -11.8 -4.06502 | AGGGGATGGGCCATT TCCAGGAA AAT TTCCTGGA TTTGCTTTGCCGCTG CYA_2524 2543742 - 2544962 + | putative lipoprotein TERM 1786 2545073 - 2545086 + G 75 -3.8 -4.67982 | GTTGCGGGCTTTAGG CAGC GCGGGG GCTG TTTTCTTCACTACGG CYA_2525 2545023 - 2546408 + | putative lipoprotein CYA_2526 2546716 - 2546826 + | hypothetical protein CYA_2527 2548365 - 2546833 - | leucyl aminopeptidase CYA_2528 2548375 - 2548476 + | hypothetical protein CYA_2530 2548507 - 2549280 + | hypothetical protein CYA_2529 2550113 - 2549277 - | manganese/zinc/iron chelate ABC transporter permease TERM 1787 2549355 - 2549331 - G 91 -5 -5.31877 | gap 1 AGCCAGGAGAAAAAA CAGCAAC-TGG GTGG CCACGATGCTG GGGCCGGAGGGCAGG TERM 1788 2550003 - 2549982 - G 77 -2.2 -5.03314 | overlap 2549983 2549999 2550000 GGCATCGCTAAAAAA CGCCAACT GCCGAA AGATGGCA AAACTGCCCAGCAGC CYA_2531 2550893 - 2550123 - | manganese/zinc/iron chelate ABC transporter ATP-binding protein CYA_2532 2551981 - 2550890 - | putative zinc ABC transporter, zinc-binding protein TERM 1789 2551277 - 2551295 + g 72 -3.9 -4.65895 | gap 1, opp_overlap 2551277 2551278, overlap 2551277 2551278 AAAGTAGGGGGCAAA G-TTGTGG AAGA CCACAAAC TTTTTCCCTGCAAAG CYA_2533 2552438 - 2551995 - | SufE family Fe-S metabolism protein CYA_2534 2553688 - 2552549 - | cyclopropane fatty acyl phospholipid synthase TERM 1790 2554320 - 2554309 - H 72 -2.2 -4.85782 | gap 1 TCGCTCAAAAATAAA GCTGG TTA CC-GC TCAGACCAGGGAAGA TERM 1791 2554604 - 2554627 + H 76 -6.6 -4.60041 | overlap 2554605 CCGCTTGACACGCTT TCCAGCGGGT CTCC ACCCGTCGGG TTTTTCACCATAACT TERM 1792 2554788 - 2554775 - H 72 -3.9 -4.78077 | opp_overlap 2554779 TGGAATGAAAACAAA GTTTT GGTT AAAAC CGCATTCTTGTTTTT TERM 1793 2555376 - 2555400 + H 83 -10 -4.34811 | opp_overlap 2555375 CCCCTAGACAAGGAG GGCCTGATGG CGAAA CCATTGGGCC TTTTCACTCTTTCTT CYA_2535 2555487 - 2555579 + | hypothetical protein CYA_2536 2555606 - 2556028 + | hypothetical protein CYA_2537 2556041 - 2557471 + | hypothetical protein TERM 1794 2557530 - 2557553 + T 100 -16 -3.74347 | CTGCTAAAACCTTTG CCGCTCTCGG AATG CCGGGAGCGG TTTCCAATTTCTAGG TERM 1795 2557724 - 2557751 + T 75 -11.2 -3.41988 | overlap 2557722 GACGTTTCCAATTTC TAGGGATCCCCC CGAA GGGGGAACCCGA TCTTCTTGGATCGGA CYA_2538 2559216 - 2558326 - | 2OG-Fe(II) oxygenase family oxidoreductase TERM 1796 2559359 - 2559382 + r 71 -8 -3.93288 | overlap 2559368 TGTTTCCAATTTCTA GGGATCCCCC CGAA GGGGGAACGC TTTGGTTGGATGACA TERM 1797 2559630 - 2559662 + r 71 -7.7 -4.08767 | overlap 2559617 2559616 GGGTTTTGGCGAGGC GCTCGCAAAAGCGTT GAT ACCGTTTTTGTGTGC TTTTGAGAACATCAA cas2-4 2559985 - 2559707 - | CRISPR-associated Cas2 family protein TERM 1798 2560304 - 2560286 - R 71 -7.4 -4.08919 | AAATCGGAAACCAAA GCAGCG TGGCGTT CGCTGC TGGCATGTAGGCAAC CYA_2541 2561273 - 2560974 - | hypothetical protein cmr6 2563264 - 2561306 - | CRISPR-associated RAMP Cmr6 family protein TERM 1799 2561344 - 2561366 + g 73 -3.4 -4.74132 | overlap 2561345 2561347 GAAAATCATCAGCAT CTTTCTTGAG CTC CTCAAGATAC TTTTTCCTAGGATCT TERM 1800 2562040 - 2562055 + g 72 -2.5 -4.7254 | CGTTCAGCAAATCCA CATGG ATCCAG CCGTG TTTTTGCTGGGGAGT CYA_2543 2563935 - 2563294 - | hypothetical protein TERM 1801 2563648 - 2563663 + g 76 -6.1 -4.64144 | opp_overlap 2563630 GGTGTCGGGCTCCAC GCCAG CTCTGC CTGGC TTTTTGAGGGTTGTT CYA_2544 2564327 - 2563935 - | hypothetical protein cmr4 2565111 - 2564341 - | CRISPR-associated RAMP Cmr4 family protein family protein CYA_2546 2566281 - 2565157 - | hypothetical protein TERM 1802 2565474 - 2565496 + g 78 -4.7 -4.72272 | CCCAGGGCCAGGCGC GGCAGAGGG AGCGC CCCTCCACC TTTTTGATGAACACG crm2-2 2569103 - 2566278 - | CRISPR-associated RAMP Crm2 family protein TERM 1803 2566875 - 2566844 - G 72 -2 -4.80882 | overlap 2566846 2566847 ATCCCAGAGTAAAAA GAGGGCGACGGCTG AGGC CAGCCGGCAACTGC GCCTTTTGCCACTGC TERM 1804 2567111 - 2567080 - G 76 -5.7 -4.57341 | opp_overlap 2567090 2567091, overlap 2567081 2567085 AACTGGCCGGAAAAA TCCAACAGAGCCC GGCTGA GGGCGCTGTGGGT GGCCGGGCCCATGCG TERM 1805 2569497 - 2569485 - RH 70 -5.5 -4.36595 | GACCGAAATTGAAAA CCCAG AAC CTGAG GGTGGGCCGACGTTG TERM 1806 2569547 - 2569528 - RH 70 -10.8 -3.36327 | opp_overlap 2569521 GTAGCCTACCGAGAA TTGGAAGG ATCC CCTTCCAA TTCCCCCTCTGTTCG CYA_2548 2570837 - 2569518 - | CRISPR-associated TM1812 family protein CYA_2549 2570815 - 2570973 + | hypothetical protein CYA_2550 2571016 - 2571600 + | hypothetical protein TERM 1807 2571845 - 2571858 + GF 71 -6.7 -4.21922 | GTGCCTATGTTCGCA GCCAA AAGA TTGGC TTTACTTTTGACTCC CYA_2551 2571628 - 2572236 + | hypothetical protein CYA_2552 2572193 - 2572879 + | hypothetical protein TERM 1808 2574837 - 2574851 + G 81 -4.2 -5.0133 | AATCTCCGGATCCTG TCAGCT ACG AGCGGA TTTTTTCCCGCAATG TERM 1809 2575548 - 2575535 - g 93 -8.1 -5.19328 | ACGCTAGAAGAAAAA GTGCG GCAG CGCAC TGCGGAGCTAGAGCG CYA_2553 2573294 - 2576749 + | sensory box histidine kinase TERM 1810 2576949 - 2576929 - f 72 -9.8 -3.56727 | opp_overlap 2576926 CCGAAGTAAGCAGAA CTTTGAGG TTATG CCTCAAAG GACTGTCTAGGGGCG TERM 1811 2579040 - 2579023 - g 86 -14.1 -3.84825 | CGCATCGACACCAAA GCCGGCC ACGG GGCCGGC AAGCCCACTGCCAAG CYA_2555 2577070 - 2579121 + | prolyl oligopeptidase eno 2580416 - 2579118 - | phosphopyruvate hydratase TERM 1812 2579421 - 2579447 + g 83 -13 -3.85698 | opp_overlap 2579421 2579420 GAGCTTGATCAAAAT GGCGTTGGCAGC GCC GCTGTCGATGCC TTTCTGCAGCCGGGC CYA_2556 2580599 - 2581003 + | universal stress protein TERM 1813 2581066 - 2581076 + F 79 -2.4 -5.19251 | overlap 2581055 TGTTGCCCTGTGTAA CAGC AAG GCCG TTTTTGTTCGTGTTG CYA_2557 2581160 - 2581519 + | ferredoxin-thioredoxin reductase, catalytic beta subunit psbX-1 2581637 - 2581753 + | photosystem II reaction center protein PsbX TERM 1814 2582175 - 2582185 + G 90 -8.2 -4.82901 | overlap 2582150 CAGCAGGTTTTTGAG CGGC TGC GCCG TTTTTGTACCCCGCG TERM 1815 2582598 - 2582616 + G 75 -3 -4.82901 | overlap 2582599 CAGTTGCCAGAGATG GGATCCCG CAC CGAGATCA TTTTTGTAGAGGGGC CYA_2559 2581836 - 2583239 + | glycosyl transferase, group 2 family protein CYA_2560 2583385 - 2584767 + | proton extrusion protein PcxA CYA_2561 2584772 - 2584924 + | hypothetical protein CYA_2562 2585527 - 2584940 - | hypothetical protein CYA_2563 2587392 - 2585536 - | small conductance mechanosensitive ion channel (MscS) family protein TERM 1816 2586420 - 2586406 - G 84 -2.1 -5.31275 | gap 1, overlap 2586408 GGCCAGCACAAAAAA GACCAG CAAG CTGG-C GATGGAGAGGCTGGA TERM 1817 2586419 - 2586408 - G 71 -5.8 -4.29153 | overlap 2586406 CCAGCACAAAAAAGA CCAG CAAG CTGG CGATGGAGAGGCTGG TERM 1818 2587272 - 2587228 - G 70 -7.8 -4.07687 | gap 1 AGTGGGGTGGGAAAA GCCGGGATCCC-GCAACTCGA GGGC TTGGGCCACCGGGATCCCAGC AGCCTTGGAGACCGG uvrB 2589562 - 2587475 - | excinuclease ABC subunit B TERM 1819 2587504 - 2587514 + g 78 -3.2 -5.02715 | GGTGGCCCAAAAGGC GTTG GCG CAGC TTTTTAATTTGGTCT CYA_2565 2590624 - 2589764 - | hypothetical protein CYA_2566 2591630 - 2590653 - | putative cobalamin biosynthesis protein CobW CYA_2567 2591753 - 2591923 + | hypothetical protein TERM 1820 2592059 - 2592082 + T 71 -4.4 -4.60041 | CAGCATTTGCCTCAG CCCAGAGGGT CTCC ACCCGTCGGG TTTTTCACCATAACT TERM 1821 2592243 - 2592230 - T 72 -3.9 -4.72007 | opp_overlap 2592234 TGGGACGAAAACAAA GTTTT GGTT AAAAC CGCATTCTTGTTTTT TERM 1822 2592657 - 2592670 + T 84 -6.7 -5.00616 | opp_overlap 2592656 CAGCGGGGCAAGTAG CAGGA AAAA TCCTG TTTTTTAACAAACCG CYA_2568 2593231 - 2592635 - | hypothetical protein TERM 1823 2593411 - 2593421 + H 79 -8.2 -4.37092 | GGCTGTACCAGATTC CGGC AAC GCCG TTTTGTACAGCCAAT TERM 1824 2594605 - 2594631 + G 76 -13.6 -3.16039 | overlap 2594625 GAGGCCGACTATCAG CGCCCCCACCCG ACG CGGGTGGCGGAG TTCGTCCGCCTGCTT CYA_2570 2593699 - 2594769 + | radical SAM protein CYA_2569 2597696 - 2594766 - | sensory box histidine kinase TERM 1825 2596658 - 2596617 - G 74 -9.4 -3.86897 | gap 1, overlap 2596583 2596618 CCCAGCTCCCAGAAA GCCCAGCA-GCAGCCCCCC GCCCA AGAGGGCCGCCTGCTGAGT GCTGCGATAGACAGG TERM 1826 2596657 - 2596618 - G 70 -12.9 -2.91924 | gap 1, overlap 2596583 2596617 CCAGCTCCCAGAAAG CCCAGCA-GCAGCCCCCC GCCCA AGAGGGCCGCCTGCTGAG TGCTGCGATAGACAG CYA_2571 2598345 - 2597704 - | quaternary amine ABC transporter permease TERM 1827 2597890 - 2597866 - G 81 -12.1 -3.85698 | GCCCGCCCCGATAAA GGCCGCCAACG TGG CGCTGGCAACC ACCTCAATAGTAGCG TERM 1828 2598146 - 2598132 - G 88 -4.2 -5.26119 | TGGCCAAAAACAAAA TCGCCA AGC TGGGGA TCACCCGCAAGCTGC CYA_2572 2598424 - 2599041 + | ISSoc2, resolvase TERM 1829 2600141 - 2600164 + GF 70 -11 -3.04461 | AATGCTATCGCTTCA CCGCTGAGCA GTAA TGCTCAGCAG TGTTCAGCGTAAATG CYA_2573 2598896 - 2600176 + | ISSoc2, transposase CYA_2574 2600434 - 2600940 + | hypothetical protein CYA_2575 2600963 - 2602072 + | sensor histidine kinase CYA_2576 2602755 - 2602150 - | response regulator TERM 1830 2602633 - 2602611 - G 71 -8.4 -3.96148 | overlap 2602612 CTGCCTGAGGAGAAA CCAGCACCAC TGT ATGGCGCTGA GACTCCAGCACCAGC CYA_2577 2603335 - 2602994 - | hypothetical protein CYA_2578 2603584 - 2603363 - | hypothetical protein CYA_2579 2604097 - 2603693 - | iron-sulfur cluster-binding protein CYA_2580 2604732 - 2604256 - | ISSoc3, orfA transposase TERM 1831 2605095 - 2605063 - gH 93 -8.5 -5.00616 | gap 1, opp_overlap 2605062 CCTCGCTTCAAAAAA GCGGGGGAGT-TGA GATCCT TCACATTCCCCCGC ATCAATTGCCCCAAG CYA_2581 2604688 - 2605959 + | ISSoc3, orfB transposase CYA_2582 2606279 - 2608678 + | recombination and DNA strand exchange inhibitor protein CYA_2583 2608920 - 2608723 - | hypothetical protein CYA_2584 2609137 - 2608814 - | hypothetical protein CYA_2585 2609414 - 2609202 - | urease, beta subunit, truncation TERM 1832 2610347 - 2610386 + H 100 -20.6 -3.14211 | CTCCCGCCCCCCTGC TGGCCCCCCAACCCCCCG TATA CGGGGGGCAGGGGGGCAA TTGATGCGGGGGAAT TERM 1833 2610392 - 2610424 + H 89 -8.5 -5.00616 | gap 1, opp_overlap 2610391 AGGGGGGCAATTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGAGG CYA_2587 2610755 - 2611231 + | ISSoc3, orfA transposase CYA_2589 2611854 - 2611714 - | hypothetical protein hrcA 2611973 - 2613151 + | heat-inducible transcription repressor TERM 1834 2613327 - 2613356 + G 95 -10.7 -4.67048 | CTCCAGATCTTGCGG GATTTGCAGCCGC GCTG GCGGTGGCAGATC TTTGTTTTGCACTGC tilS 2613192 - 2614202 + | tRNA(Ile)-lysidine synthetase CYA_2592 2615212 - 2614376 - | SpoIID/LytB domain-containing protein CYA_2593 2616580 - 2615291 - | drug:H+ antiporter-1 family protein TERM 1835 2615849 - 2615838 - G 71 -5.8 -4.25873 | GCCGTATAAAAAAGA CCTG GATT CAGG GGAACTCCGGCCTCT TERM 1836 2616125 - 2616108 - G 81 -4 -5.00884 | overlap 2616110 AGCTCCTGCAAAAAA CCGCCC AAAGCA GGGCCG ATGGCTACACCCATG CYA_2594 2616763 - 2617065 + | hypothetical protein CYA_2595 2617463 - 2617089 - | putative endoribonuclease L-PSP TERM 1837 2617258 - 2617244 - G 91 -3.5 -5.41143 | overlap 2617245 2617246 TATCCGCCAAAAAAA CGGTG GTCTT CACCA CATTGGCCAAGCTTG TERM 1838 2617603 - 2617586 - g 77 -2.5 -5.02074 | overlap 2617589 GGATCCCGCAAAAAA CAAGCCG GCAA CGGCAAG ATCAACTTGTCGACA TERM 1839 2617600 - 2617589 - g 83 -7.2 -4.61482 | overlap 2617586 TCCCGCAAAAAACAA GCCG GCAA CGGC AAGATCAACTTGTCG CYA_2596 2617489 - 2617641 + | hypothetical protein TERM 1840 2617688 - 2617654 - g 73 -11.4 -3.61764 | opp_overlap 2617680 TGATCAAGTTGCAAA CGCCTCTAAAGCCGGA ACC TGCCGCTGTAGAGGCG CTGCTCAAGTCGCTC CYA_2597 2617632 - 2617844 + | hypothetical protein TERM 1841 2617832 - 2617854 + T 77 -11.3 -3.62597 | gap 1, opp_overlap 2617826 GATCAAGATTGACAC TCCCACCGCC TAAA GGCGG-GGGA TTCTTACGCAGTCCA TERM 1842 2617980 - 2618003 + T 71 -4.4 -4.60889 | CAGCATTCGCCTCAG CCCAGAGGGT CTCC ACCCGTCGGG TTTTTCACCATAATT CYA_2599 2619194 - 2619075 - | hypothetical protein psbX-2 2619328 - 2619212 - | photosystem II reaction center protein PsbX CYA_2601 2619778 - 2619425 - | ferredoxin-thioredoxin reductase, catalytic beta subunit CYA_2603 2621439 - 2620696 - | hypothetical protein TERM 1843 2620807 - 2620786 - G 82 -2.9 -5.17054 | AGAATAGTGAAAAAA GTGTCGCCC CCCA GGACAAAAC CACATTTGATCCCCT TERM 1844 2621584 - 2621561 - R 73 -11.8 -2.99649 | gap 1, opp_overlap 2621560 2621555 2621557 AGATCTCGACAGAGA GGAGGGGATGA GGA TC-TCCCCTCC CTGCTTTGAGAAGCC CYA_2604 2623191 - 2621611 - | PsbB/PsbC family photosystem II protein TERM 1845 2622073 - 2622059 - G 93 -7.8 -5.01732 | opp_overlap 2622069, overlap 2622062 AAGCCGCGCAAAAAA GGAGAG AGG CCCTCC CGGTAGATGGGCAGG TERM 1846 2623002 - 2622973 - G 70 -12.1 -3.16055 | overlap 2622963 2622962 2622975 CAAATGGGGCAGCAA GATCAGCCCCTGG CTGC CCATGGGCTGAGC CGGATCCCAGTGGGC TERM 1847 2623000 - 2622975 - G 73 -13.3 -3.13899 | overlap 2622963 2622962 2622973 AATGGGGCAGCAAGA TCAGCCCCTGG CTGC CCATGGGCTGA GCCGGATCCCAGTGG CYA_2605 2623749 - 2623240 - | flavodoxin FldA TERM 1848 2623374 - 2623402 + g 93 -7.4 -5.00616 | opp_overlap 2623372 TGGACTCATTGAACT CGTAGCCTTCTG TAGGC CAGAAGCCGACG TTTTTTCCGCCGCGC CYA_2606 2624840 - 2623806 - | PsbB/PsbC family photosystem II protein TERM 1849 2623930 - 2623902 - G 87 -6 -5.1963 | overlap 2623916 CTGAAGGAAGAAAAA GGCCAGCCAA AAATGGGCA TTGGCCAGCC AAACCCTAGATGTGA TERM 1850 2624400 - 2624418 + g 77 -2.4 -5.0916 | overlap 2624403 CACCAGGTGGATCCC TAGGATGG TGG TCATCTTG TTTTTGTCTTGCCAG TERM 1851 2624403 - 2624415 + g 72 -4.1 -4.63863 | overlap 2624400 CAGGTGGATCCCTAG GATGG TGG TCATC TTGTTTTTGTCTTGC TERM 1852 2624776 - 2624764 - G 70 -10.5 -3.58329 | opp_overlap 2624773, overlap 2624765 GAAAGATCGGTCAAA CGGGC GTT GCCCG CCCACCACGGGATCT TERM 1853 2624916 - 2624883 - R 83 -9.5 -4.25104 | gap 1, overlap 2624868 GCTTTTCTAGGAAAA GGCCAGAGACCTTGCC CCA GGCCC-GCCTCTGGCC GCACGGACACATCCT TERM 1854 2624972 - 2624950 - R 72 -10.7 -3.39856 | GAGACACGTAACCAA CTGTTGAGA GTAAA TCTCAACAG CGAGCTGTGACCTAC CYA_2607 2625205 - 2625026 - | hypothetical protein TERM 1855 2625340 - 2625311 - g 71 -5.7 -4.35524 | gap 1, overlap 2625305 2625312 CGGGGAAACCCAAAA GGATCCCTCGGC TGCGGGC GGCG-GGGATCC ACCGGCCCTGAGCCA TERM 1856 2626129 - 2626111 - g 72 -7.4 -4.19238 | TGGGCAAGGTCAAAA TTGGCGAA GCC TTCGCCCA GCAAAATCCTTTTCT TERM 1857 2626378 - 2626360 - g 78 -3 -5.08824 | CCCCTATCGAAAAAA GCCTTTGC GAT GCCAATGC CCGTGGATCTATTAC CYA_2608 2625231 - 2626463 + | putative iron-regulated protein A TERM 1858 2627273 - 2627253 - g 81 -6.7 -4.68103 | GCAAGTTCAAGAAAA GGCCGTTCG GGG CTATCGGCC AGAGGCCAAGGTGGA CYA_2612 2627221 - 2628156 + | hypothetical protein CYA_2611 2628827 - 2628153 - | putative hydroxylase TERM 1859 2629005 - 2628991 - H 78 -4.2 -4.85599 | opp_overlap 2628993, overlap 2628993 GGTATTCGACAAAAA GAGCTC TGC GAGCTA TTGGGCTTAGACTAC CYA_2613 2629189 - 2629848 + | hypothetical protein CYA_2614 2630953 - 2630177 - | hypothetical protein TERM 1860 2630693 - 2630732 + g 74 -2.3 -4.87665 | opp_overlap 2630701 2630706, overlap 2630695 2630701 GCCGGCTAGCCCTGC TGCAGA-AACATTAGCGCG AGTG CGAGC-AATGTTATCTGGA TTTTTCTCAATGCCG TERM 1861 2630910 - 2630930 + g 93 -7.5 -5.08824 | overlap 2630911 TTACCTGCCGCAGCC AGTACCTGG TGT CCAGGTGCA TTTTTTAAGTCCAGC TERM 1862 2630911 - 2630929 + g 73 -11 -3.64812 | overlap 2630910 TACCTGCCGCAGCCA GTACCTGG TGT CCAGGTGC ATTTTTTAAGTCCAG CYA_2615 2631858 - 2631196 - | hypothetical protein mutL 2632185 - 2633936 + | DNA mismatch repair protein CYA_2617 2633965 - 2634822 + | VKORC1/thioredoxin domain-containing protein CYA_2618 2636108 - 2635110 - | response regulator TERM 1863 2636196 - 2636167 - R 70 -9.9 -3.42574 | overlap 2636168 2636171 CCAACGCGAGCAGAA GGCAGGCTGGAGG AAGA CCCCCAGCCTTCG AGTTCAGCTGACAAC TERM 1864 2636195 - 2636168 - R 75 -13.4 -2.65223 | overlap 2636167 2636171 CAACGCGAGCAGAAG GCAGGCTGGAGG AAGA CCCCCAGCCTTC GAGTTCAGCTGACAA TERM 1865 2636192 - 2636171 - R 75 -13.7 -2.61548 | overlap 2636168 2636167 CGCGAGCAGAAGGCA GGCTGGAGG AAGA CCCCCAGCC TTCGAGTTCAGCTGA btpA 2637158 - 2636271 - | photosystem I biogenesis protein BtpA pyrD 2638301 - 2637171 - | dihydroorotate dehydrogenase 2 TERM 1866 2638044 - 2638032 - G 74 -9.1 -3.89215 | overlap 2638039 2638040 CTCCACAAAGCCAAA GCCCA AAC TGGGC CAGACGCCCACAGCT TERM 1867 2638354 - 2638390 + r 81 -10.7 -4.19238 | opp_overlap 2638355, overlap 2638355 GATCTTCCCCAAAAA ACAGGGGCCTGCAAAAG TCT CCTCTGCAGGCCCCCGC TTTTGAGCTTAGGCG TERM 1868 2638355 - 2638389 + r 81 -14.2 -3.11222 | opp_overlap 2638355, overlap 2638354 ATCTTCCCCAAAAAA CAGGGGCCTGCAAAAG TCT CCTCTGCAGGCCCCCG CTTTTGAGCTTAGGC TERM 1869 2638389 - 2638355 - R 100 -20.8 -5.00884 | opp_overlap 2638355 2638354 ATCTTCCCCAAAAAA CAGGGGCCTGCAAAAG TCT CCTCTGCAGGCCCCCG CTTTTGAGCTTAGGC CYA_2621 2639702 - 2638449 - | hydrophobic amino acid ABC transporter amino acid-binding protein TERM 1870 2638673 - 2638701 + g 86 -12.3 -4.18018 | opp_overlap 2638669, overlap 2638661 GCCGCAGAGCATCGC GGATGGCGGTGCC GTC GGCGCTGCCGGCC TTTTGAATGGCCAGA TERM 1871 2638745 - 2638729 - G 72 -2.1 -4.69326 | overlap 2638730 AGAGCCAAGACAAAA GCGGCAT CGT AGGCCGT GTCGATGTAGGGGGT TERM 1872 2639162 - 2639175 + g 72 -3.7 -4.63932 | TGATGTAGATGATGG CCAGG CGCT CCAGG TTTTCTTCGCGGGTA CYA_2622 2639930 - 2640748 + | hydrophobic amino acid ABC transporter ATP-binding protein CYA_2623 2640745 - 2641452 + | hydrophobic amino acid ABC transporter ATP-binding protein recN 2643185 - 2641479 - | DNA repair protein RecN CYA_2625 2643572 - 2643258 - | hypothetical protein TERM 1873 2643430 - 2643446 + g 75 -3.6 -4.87626 | overlap 2643430 2643432 TCGGGGGCAGCGGCA GCGGCT TGGGC AGCCTC TTTTTGCTGTTGCCG CYA_2627 2643684 - 2644310 + | RNA pseudouridine synthase family protein hisB 2644913 - 2644293 - | imidazoleglycerol-phosphate dehydratase TERM 1874 2645069 - 2645042 - H 72 -2.6 -4.8622 | gap 1 TCCCGGAAGCAAAAA GGTTGGCGGC-AG CTC CTCACCCCCGACC TCCCTGGCCGGGCCT TERM 1875 2645803 - 2645832 + G 84 -8.5 -4.46212 | gap 1, overlap 2645805 2645807 GGAGGTGGCCTGGAG CCCGGCGGATCGCC GTC GGCG-TCTGCTGCG TTTTCTAGTCGAAAA TERM 1876 2645949 - 2645931 - g 84 -3.7 -5.1861 | overlap 2645933 GCCACCACCAAAAAA CCGCTGC CTACC ACGGCGG CCTAGAAGCAGGATC CYA_2628 2645144 - 2646559 + | putative ATP-dependent DNA helicase RecQ CYA_2629 2646700 - 2648472 + | glycosyl hydrolase domain-containing protein CYA_2630 2648737 - 2649054 + | cytochrome c family protein CYA_2631 2649064 - 2649741 + | putative phosphatidate cytidylyltransferase CYA_2632 2650144 - 2649785 - | hypothetical protein CYA_2633 2650803 - 2650477 - | putative DNA-binding protein CYA_2634 2651022 - 2650912 - | hypothetical protein CYA_2635 2651108 - 2652193 + | RNA polymerase sigma factor, group 1 CYA_2636 2653569 - 2652298 - | ISSoc3, orfB transposase TERM 1877 2653162 - 2653194 + gF 93 -8.5 -5.00616 | gap 1, opp_overlap 2653161 CTTGGGGCAATTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGGGG CYA_2637 2654259 - 2653693 - | ISSoc4, transposase orfB CYA_2638 2653525 - 2653755 + | ISSoc3, orfA transposase, interruption-N CYA_2639 2654639 - 2654241 - | ISSoc4, transposase orfA CYA_2640 2654705 - 2655019 + | ISSoc3, orfA transposase, interruption-C TERM 1878 2656373 - 2656386 + T 72 -3.9 -4.72007 | opp_overlap 2656371 AAAAATAAGAATGCG GTTTT AACC AAAAC TTTGTTTTCATCCCA CYA_2642 2658311 - 2656899 - | folate-biopterin transporter (FBT) family protein TERM 1879 2657523 - 2657505 - G 78 -6.6 -4.57073 | overlap 2657506 CACCTGGCCTAAAAA CCCCGGCC CAA AGCCGAGA TCGCTGGTAAAAAAA TERM 1880 2657562 - 2657544 - G 100 -6.6 -5.55855 | GGTAAAAAAATAAAA CAGGGCCA CGT CGGCGCTG GGGGTTGCCTGCCAG TERM 1881 2658182 - 2658172 - G 83 -6.8 -4.8622 | overlap 2658173 TCCTTCAAGTAAAAA CTGG TGG CCAG CCGCGCCAGCCCCAC rph 2658593 - 2659321 + | ribonuclease PH TERM 1882 2659491 - 2659511 + F 72 -9.8 -3.56727 | opp_overlap 2659488 CACCCCTAGACAGTC CTTTGAGG CATAA CCTCAAAG TTCTGCTTACTTCGG TERM 1883 2659747 - 2659727 - f 90 -16.9 -3.34104 | opp_overlap 2659743, overlap 2659718 CGATAATGAGATGAA GCAGCCGTG AAT CACGGCTGC CTCTGCAAGCTTGGG TERM 1884 2660574 - 2660544 - g 77 -2.5 -5.00616 | gap 1, overlap 2660546 2660564 GCCTGGGCCAAAAAA GGTCTGGTGAGCCT GCAA ACGCCC-CCAGAAC TGCTGCAGGCTAAGC TERM 1885 2660699 - 2660709 + G 74 -2.4 -4.86731 | opp_overlap 2660684 GGGCAACCCCGCCGA GGTG CTC CCCC TTTTGTTTCAGCACC CYA_2644 2659824 - 2661062 + | response regulator ribE 2661088 - 2661723 + | riboflavin synthase subunit alpha aroK 2661750 - 2662319 + | shikimate kinase TERM 1886 2662349 - 2662325 - T 100 -7.2 -5.66684 | gap 1 CAACCGATAAAAAAA GGGATCCGCAA ACCT CTG-GGATCCC TAGACTTGCCAGGAG psbD-2 2663455 - 2662397 - | photosystem II protein D2 TERM 1887 2663510 - 2663494 - H 78 -4.3 -4.9445 | overlap 2663495 2663498 ACAACCAACCAAAAA TGCAGTG CAG CACCGCC CCCAGCATTTCTGAG TERM 1888 2663605 - 2663621 + H 75 -8.7 -4.13767 | CCCCAGCTTGGCCGG CACAGGG ATC CCTTGTG TTTTAGGATGGGAAG glgA 2663700 - 2665154 + | glycogen synthase CYA_2650 2665281 - 2665898 + | TPR repeat-containing protein CYA_2649 2666446 - 2665895 - | putative methyltransferase CYA_2651 2667342 - 2666452 - | TPR repeat-containing protein CYA_2652 2668245 - 2667403 - | HEAT repeat-containing PBS lyase CYA_2653 2671094 - 2668683 - | DEAD-box ATP dependent DNA helicase trpG 2671274 - 2671909 + | anthranilate synthase component II TERM 1889 2672274 - 2672286 + G 70 -10.5 -3.60296 | GGGGGTGCGCATGCC GCGGG GCC CCCGC TTTGGCCTCAACGTG CYA_2655 2671900 - 2672670 + | metallo-beta-lactamase superfamily hydrolase CYA_2656 2672675 - 2673235 + | ankyrin repeat-containing protein CYA_2657 2674238 - 2673243 - | deoxyhypusine synthase family protein TERM 1890 2675173 - 2675154 - g 85 -5.6 -5.03314 | opp_overlap 2675153 GGCAGGGCGAAAAAA CCTGTCCG AGAG CGAGCAGG CGTTGTGCTTCTTGG bioB 2674363 - 2675295 + | biotin synthase TERM 1891 2677242 - 2677257 + G 74 -5.4 -4.59773 | gap 1 CCCGGAGGATCAGGA GCGGATC TTC GA-CCGC TTTTTCCGGGTGGAG CYA_2659 2675506 - 2677509 + | sensory box histidine kinase TERM 1892 2677566 - 2677578 + GF 82 -5.5 -4.84761 | overlap 2677552 GGCCTCAGCGCTGCC TGCGG CTT TCGCA TTTTTGTGCCGCTGT CYA_2660 2677542 - 2678036 + | hypothetical protein TERM 1893 2678044 - 2678062 + GT 89 -6 -5.24129 | overlap 2678039 GGGCCTAGGCCTGGG GATCCACA GCT TCTGGATC TTTTTTGTGGCCCGC CYA_2661 2677850 - 2678146 + | hypothetical protein CYA_2662 2679193 - 2678156 - | CBS domain-containing protein panC/cmk 2681012 - 2679390 - | bifunctional pantoate ligase/cytidylate kinase TERM 1894 2679560 - 2679572 + g 71 -5.5 -4.28254 | CGCGGCGATCCCGCT GCTCG ATC TGAGC TTTTAACTCTTCGAG TERM 1895 2679819 - 2679800 - G 74 -9.2 -3.89346 | CCGCCACCTGAGAAA CCCAGCGG GTCA CCTCTGGG GAACGAATGGCCTGG petG 2681197 - 2681084 - | cytochrome b6-f complex subunit PetG menE 2681420 - 2682826 + | O-succinylbenzoic acid--CoA ligase CYA_2665 2683404 - 2682823 - | DnaJ domain-containing protein TERM 1896 2683953 - 2684010 + G 74 -12.7 -3.28712 | gap 1 TCGATGGATTCCACA GGGGCTACGCCGC-TCCATTTGGCTGCT GCC AGCGGCCAGGTGGAAGTGGTGGAGCGGC TTCTCAAGGCAGGCA TERM 1897 2684150 - 2684131 - g 74 -4.9 -4.67168 | AAAAAGGGGCAAAAA CCTGTGG CGTTCT CCACTGG GCTACAGCTACGGGT CYA_2667 2683755 - 2684510 + | ankyrin repeat-containing protein TERM 1898 2684606 - 2684578 - f 89 -8.2 -4.98522 | AATTCCACAGAAAAA GGAGAGAGGA TGTTAGATT TCCCCTCTCC GATCTCTTCGTCGCG CYA_2668 2685242 - 2685592 + | hypothetical protein CYA_2669 2685847 - 2685650 - | hypothetical protein CYA_2670 2685875 - 2686795 + | L-lactate dehydrogenase TERM 1899 2687209 - 2687221 + G 75 -4.1 -4.78848 | GGGACGAGCTGGGGC TGGAT AAC GTCCA TTTTCTGTTTGCCAA trmB 2686875 - 2687585 + | tRNA (guanine-N(7)-)-methyltransferase CYA_2672 2687653 - 2689266 + | CAAX amino terminal protease family protein TERM 1900 2689317 - 2689299 - T 73 -12.4 -3.01712 | opp_overlap 2689297 2689293 2689291, overlap 2689312 2689313 TTTTCTTGCCGAAGA GGCGGCTC CAG AAGCCGCC GCTATCCTCTTTGCG CYA_2673 2690304 - 2689279 - | DnaJ domain-containing protein TERM 1901 2689879 - 2689912 + gT 74 -11 -3.28712 | overlap 2689889 GGTTTTCTCCAGCAG GGTGGCCATAGAGC TGTATT GCTCTTTGGCCAGC TTCTCCACCCGCCGG CYA_2674 2691098 - 2690262 - | polar amino acid ABC transporter (PAAT) family, amino acid-binding protein CYA_2675 2692081 - 2691230 - | inositol monophosphatase family protein CYA_2676 2692424 - 2693002 + | FHA domain-containing protein TERM 1902 2694287 - 2694271 - g 72 -7.9 -4.13767 | overlap 2694274 GTTGGCATTGCAAAA GACCGGC CTG GCCGACC AACTGCGCCTCTATT cobQ 2693306 - 2694793 + | cobyric acid synthase galE 2694862 - 2695872 + | UDP-glucose 4-epimerase cutA 2695944 - 2696279 + | divalent-cation tolerance protein CutA coaD 2696302 - 2696781 + | pantetheine-phosphate adenylyltransferase CYA_2682 2697196 - 2696798 - | hypothetical protein CYA_2683 2697360 - 2698538 + | arsenite-antimonite transporter ArsAB CYA_2684 2698806 - 2699423 + | ISSoc2, resolvase TERM 1903 2700523 - 2700546 + GF 70 -11 -3.04461 | AATGCTATCGCTTCA CCGCTGAGCA GTAA TGCTCAGCAG TGTTCAGCGTAAATG CYA_2685 2699278 - 2700558 + | ISSoc2, transposase TERM 1904 2701585 - 2701603 + G 73 -3 -4.74103 | overlap 2701586 GTTTGTCCGCTTTGG CGTGATGC ACC GCAACACC TTTTTGAATTCGCCG TERM 1905 2701644 - 2701678 + G 73 -12.8 -3.14132 | TGCCTACGTTGCAAT TTCGCCGCCGGCCAAC GCT GTTGGCTGCCGGCCAG TTGGTGGGCACCGAA TERM 1906 2701904 - 2701892 - g 72 -4.1 -4.59773 | CTGGAGGGGCAAAAA GTTCG CAG CAAAC AAGAGCGCTACGCCC gid 2700632 - 2701987 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1907 2702611 - 2702601 - f 73 -8.2 -4.03413 | ATGTCGTGAGACAAA GCGC TCC GCGC CGCCGAAGGCGAACA TERM 1908 2702764 - 2702774 + F 75 -2.4 -5.1287 | AACCGGCGACTCAAC CTCC TTT GGTG TTTTTTGAGTCTACG TERM 1909 2703563 - 2703576 + F 72 -3.7 -4.72272 | opp_overlap 2703533, overlap 2703537 CCACCTTCAAAGGCG GGGCC TTAC GGCAC TTTTTGGTAGAAGGA TERM 1910 2704636 - 2704615 - g 78 -10.1 -4.09685 | gap 1, overlap 2704616 CGGCATCGGGGAAAA CGCGGCGCCG GTA CGG-GCCGCA GCCTGTGCCAACCTA ackA 2703599 - 2704810 + | acetate kinase CYA_2689 2704985 - 2705455 + | hypothetical protein CYA_2690 2705996 - 2706538 + | FHA domain-containing protein CYA_2691 2706690 - 2706562 - | hypothetical protein TERM 1911 2706645 - 2706629 - G 78 -6.5 -4.54727 | opp_overlap 2706628, overlap 2706631 CCGGGCAAACCAAAA GTGACCT GTG AGGTCGC GCTGTTCTGTGTTTT TERM 1912 2706758 - 2706771 + G 72 -2.3 -4.75174 | opp_overlap 2706759, overlap 2706759 TCCCATCACCGAAGA ACAGC AGGA GCTGA TTTTTCCATTGCCTC TERM 1913 2707220 - 2707231 + G 74 -5.8 -4.42806 | overlap 2707207 GGCTGGCTCGGATTT TCCG CCGC CGGA TTTGTTTCGAGCTGA TERM 1914 2707552 - 2707574 + G 90 -8.4 -4.83615 | GTTCCTTTTTCTCCG GCCGATTGTT GGA AGCATTCGGC TTTTTGTGGCAGGTA CYA_2692 2706717 - 2708738 + | FHA domain-containing protein TERM 1915 2709275 - 2709304 + G 72 -2.1 -4.78237 | overlap 2709277 GGTGGGTCTTCCTTA TATCCCAACCCAA CGGT TTGACTTGGGAGA TTTTATTCTCCACTA CYA_2693 2708985 - 2709437 + | hypothetical protein CYA_2694 2709546 - 2710163 + | ISSoc2, resolvase CYA_2695 2710018 - 2711283 + | ISSoc2, transposase TERM 1916 2711383 - 2711371 - f 79 -7.7 -4.56597 | CTTTCTTGGGAAAAA GGGTA AAC TACCC GGCTCCAACCGCCCT CYA_2696 2711745 - 2712014 + | hypothetical protein TERM 1917 2712040 - 2712016 - f 78 -14.3 -2.51173 | overlap 2712015 2712026 AGGAACCTGAGTAAG GGCCTCACAAG CAG CCTGCGAGGCC GAGAGTGAGATATCC TERM 1918 2712187 - 2712166 - g 70 -12.3 -3.14344 | overlap 2712172 GAGTGCCTGCAGCAA CAGGAAGCC CCTC GGCCTCCTG CCACTCGCGGTCGCC CYA_2697 2712109 - 2712762 + | putative guanylate kinase TERM 1919 2714000 - 2713977 - f 71 -4.4 -4.60889 | AATTATGGTGAAAAA CCCGACGGGT GGAG ACCCTCTGGG CTGAGGCGAATGCTG TERM 1920 2714148 - 2714126 - f 77 -11.3 -3.62597 | gap 1 TGGACTGCGTAAGAA TCCC-CCGCC TTTA GGCGGTGGGA GTGTCAAATATACCT CYA_2699 2714420 - 2715112 + | DNA-binding response regulator TERM 1921 2715738 - 2715766 + G 81 -3.8 -5.07567 | gap 1 ACGCCGGGGCTAATC TTGGGCCAG-GCC ATTG GGCGCTGGGGCAA TTTTTTCAACTCTGA lgt-2 2715285 - 2716424 + | prolipoprotein diacylglyceryl transferase TERM 1922 2718461 - 2718450 - T 82 -5.8 -4.87318 | overlap 2718451 2718452 GGGAAAATTCAAAAA GCCT GCCA AGGC CGGGGCAATCGGCAG CYA_2702 2719907 - 2718426 - | M50 family peptidase TERM 1923 2719087 - 2719060 - G 73 -3.2 -4.77165 | CTGGGGATAACAAAA GCCGGGCTGAGG CGCA CCCCATACCTGC CGGCCATCCAGCGGT acsF 2721045 - 2719954 - | magnesium-protoporphyrin IX monomethyl ester cyclase gltS 2725752 - 2721145 - | ferredoxin-dependent glutamate synthase TERM 1924 2722227 - 2722249 + g 72 -7.7 -4.21194 | GGTCCGGAGTGCCAG GGAAGCGCT TGCGC AGCTCTTCC TTTTGGCTGGTCACC TERM 1925 2722803 - 2722817 + g 71 -5.6 -4.37534 | overlap 2722805 CGCCTTCGCCCGGCT TGGCCC CCT GGGCAA TTTTGATCTCGATTT TERM 1926 2724454 - 2724472 + g 75 -3.1 -4.84359 | GTGCTGAGCTGCCAC CTGGG TCTTGATCT CCCAG TTTTTGTAAAGCTGG TERM 1927 2725208 - 2725198 - G 78 -4.6 -4.70772 | overlap 2725204 2725205 ATAGATGGAATAAAA GCCA AAC CGGC TTTCCACCTGCCGCC TERM 1928 2725596 - 2725619 + g 78 -3 -5.00884 | overlap 2725594 AGCCGCCGCGGTGCT CCATGCAGGC GAGA GCTTGGAGGG TTTTTTGCAGCAGCT TERM 1929 2725840 - 2725829 - R 74 -7.2 -4.25848 | AATCCGGCAGGAAAA GGGG TCAG CCCC AAGTCAAGCTGGATT CYA_2705 2725967 - 2725833 - | hypothetical protein CYA_2706 2726886 - 2726041 - | hypothetical protein CYA_2707 2727113 - 2727310 + | hypothetical protein TERM 1930 2728258 - 2728284 + G 71 -10.8 -3.53012 | AGCCAGATCCGCGCC CACCTCGAGGCC CAT GGGCTGGAGGTG TTTAGCAGCAGCCAA CYA_2708 2727385 - 2728404 + | drug exporter ABC transporter ATP-binding protein CYA_2709 2728530 - 2728928 + | ISSoc4, transposase orfA CYA_2710 2728910 - 2729476 + | ISSoc4, transposase orfB TERM 1931 2729826 - 2729804 - g 71 -5.5 -4.36914 | CGGGGCCGGACAAAA CTACACCCA GTTTT TGGGGGCAG GCGTGATCGTGTTTA TERM 1932 2730352 - 2730383 + G 73 -8.6 -4.00782 | opp_overlap 2730352 CCTGGGGCGAACTCA CCCTGGCGGGATCC CTGG GGCTCTTGACAGGG TTTGTGGTGGTGTCA CYA_2711 2729586 - 2730440 + | drug exporter ABC transporter permease CYA_2712 2730679 - 2730464 - | hypothetical protein CYA_2713 2730798 - 2731442 + | hypothetical protein CYA_2714 2734870 - 2731625 - | GAF domain/histidine kinase domain-containing protein TERM 1933 2732711 - 2732695 - GT 76 -10.9 -3.68886 | AGCAACTTACCCAAA TGAGCTG GCT CAGCTCA GGGGTCAACGTCTGC TERM 1934 2734760 - 2734749 - GT 74 -5.8 -4.42386 | overlap 2734751 TCCGGATCGACAAAA GCCT GCAA AGGC ATAGCAGCAAGCAAT gltX 2736242 - 2734803 - | glutamyl-tRNA synthetase TERM 1935 2735147 - 2735127 - GH 88 -3.9 -5.27335 | overlap 2735129 CTCTTGAAACAAAAA GCGGCTC AGGGGAG GAGCCTC CGTCAGGCGGTCGAT TERM 1936 2735222 - 2735200 - GH 74 -12 -3.05463 | ACCTCTTCCAGCCAA GTGGGATCCG GCA CGGATCCCAG GTCAAACCCCGCCGC TERM 1937 2735345 - 2735332 - GH 74 -5.9 -4.4078 | TTGTTCCAATCAAAA CGAGC GGCA GCCCG GTTGACCCGGTCGAA TERM 1938 2736189 - 2736171 - GH 77 -11.7 -3.67792 | GTAGAGCCAGTTAAA CACCGCC GTCCG GGCGGTG CCGATGTGCAAGTTG CYA_2716 2736469 - 2736819 + | hypothetical protein CYA_2717 2736917 - 2737156 + | hypothetical protein TERM 1939 2737218 - 2737194 - T 70 -12.2 -2.59431 | TTTGCTTAGAAGGGA TCCCCCTCCT CAACC AGAAGGGGGA GAAGAGCTTCCATCT CYA_2718 2738195 - 2737203 - | hypothetical protein CYA_2719 2738507 - 2738226 - | hypothetical protein TERM 1940 2738396 - 2738425 + g 76 -10.7 -3.72576 | gap 1 CGGCTTCCACCTCCT GGCGGATGGCGGCA ATG TGCTGCCG-CTGCC TTTCATCCAAGCCGG TERM 1941 2739473 - 2739505 + H 89 -8.5 -5.00616 | gap 1, opp_overlap 2739472 CTTGGGGCAATTGAT GCGGGGGAATGTGA AGGATC TCA-ACTCCCCCGC TTTTTTGAAGCGAGG CYA_2721 2739836 - 2740009 + | ISSoc3, orfA transposase, interruption-N TERM 1942 2740409 - 2740388 - g 90 -2.3 -5.44721 | gap 1, overlap 2740391 ATGACTCTAAAAAAA GACCTACTGC AGT GCAA-AAGTC AAAGAAGAGGAGGTG CYA_2722 2740043 - 2740447 + | ISSoc4, transposase orfA CYA_2724 2741015 - 2741329 + | ISSoc3, orfA transposase, interruption-C TERM 1943 2741425 - 2741439 + F 71 -7.8 -4.11692 | GGTTCTGATGGGCAG GAGCGG AGA TCGCTC TTTTGGGGGTGGCTG CYA_2725 2741474 - 2741728 + | hypothetical protein CYA_2726 2741783 - 2742499 + | putative outer membrane protein CYA_2727 2742709 - 2744052 + | response regulator TERM 1944 2744236 - 2744265 + G 71 -11.3 -3.40775 | overlap 2744234 2744234 GATAGGCGTAATCCT GCTCAGCGGTTGG GTGG CCAGCCGCAGCGC TCTTTCCGTAGCAAT CYA_2728 2744120 - 2744623 + | hypothetical protein aroE 2744659 - 2745534 + | shikimate 5-dehydrogenase TERM 1945 2745856 - 2745844 - g 78 -3.3 -5.03145 | CAACGGTGGAAAAAA TACGG GAT CCGTT GGCTGGGGGGCGTGC CYA_2730 2745811 - 2747475 + | hypothetical protein CYA_2731 2747491 - 2747706 + | hypothetical protein argS 2749709 - 2747913 - | arginyl-tRNA synthetase CYA_2733 2749921 - 2750025 + | hypothetical protein CYA_2734 2750055 - 2750906 + | electron transfer flavoprotein, beta subunit/FixA family protein TERM 1946 2751205 - 2751230 + G 73 -13.3 -3.23853 | overlap 2751203 TCACCTGCCCCCAAT CCTGATCGGCC ATGG GGCGGATCAGG TCTTCGTTGCCGACC TERM 1947 2751320 - 2751309 - g 71 -5.8 -4.26903 | TGGACTTGATCAAAA GCTG GCCC CAGC CGCCCCACACCATCC TERM 1948 2752115 - 2752092 - g 71 -5.2 -4.48072 | gap 1, overlap 2752093 AGATGCAGGAGAAAA CCCAGGC-GGA CTC TCCTGCCCGGC CTTCGCCAACCCCCG CYA_2735 2751044 - 2752162 + | electron transfer flavoprotein, alpha subunit/FixB family protein CYA_2736 2752465 - 2752181 - | hypothetical protein CYA_2737 2752755 - 2753897 + | response regulator CYA_2738 2754125 - 2754511 + | response regulator CYA_2739 2754508 - 2754873 + | response regulator cheW 2755039 - 2755503 + | chemotaxis protein cheW CYA_2741 2755812 - 2758262 + | putative methyl-accepting chemotaxis protein TERM 1949 2758632 - 2758606 - g 71 -9.5 -3.74693 | gap 2 GCCCACTCCATCAAA GGCGGAGCGGCCA TGC TGGCC-CT-CGCC AGCATTCAGCGGACT TERM 1950 2759979 - 2759962 - g 70 -10.5 -3.61398 | GCCGCGCCGGAAGAA GCCGCAG CAGC CCGCGGC TGGCTCCAGGATAGG TERM 1951 2760573 - 2760600 + G 81 -7.7 -4.52857 | gap 1 AGACTTGTGGGCTGA GTTCCCC-GCCG ACATC TGGCCGGGGGAC TTTTCTGTCCCCGAT CYA_2742 2758450 - 2763711 + | sensor histidine kinase/response regulator TERM 1952 2764105 - 2764092 - g 86 -8.1 -4.57073 | GAGGCCCTGCAAAAA TCCCG GCGG CGGGA AATTCGTCAGCTAGC CYA_2743 2763846 - 2764490 + | hypothetical protein TERM 1953 2764678 - 2764696 + G 73 -6.6 -4.34947 | overlap 2764679 GAGTGGAGATCCCGC TGGCTGGC GGG GCTGGCCG TTTTGCTGCTGTGTT lnt 2764603 - 2766219 + | apolipoprotein N-acyltransferase cbiT 2766533 - 2767138 + | precorrin-6B methylase TERM 1954 2767216 - 2767203 - f 76 -6.7 -4.63486 | opp_overlap 2767205, overlap 2767205 ATGGGCTCAAGAAAA TTGGG CTAG CCCAA GCCCTCTTTGGAGAT CYA_2747 2767286 - 2767540 + | hypothetical protein CYA_2748 2767962 - 2767600 - | RlpA family protein, truncation CYA_2750 2768582 - 2768833 + | ferredoxin-thioredoxin reductase, variable subunit CYA_2749 2769303 - 2768830 - | hypothetical protein TERM 1955 2769417 - 2769434 + H 70 -9.8 -3.42548 | TCTTCGGCTATTCTC CCCGGC CTCTCA GCCGGG TTAATATTAATTAAT TERM 1956 2770125 - 2770102 - g 91 -9.5 -4.57569 | overlap 2770118 GGACTTTTTGAAAAA CCCCGAGCG GTACAA CGCTCTGGG CGCCAGGATCCCGCG hflB 2769533 - 2771449 + | cell division protein FtsH TERM 1957 2771467 - 2771509 + T 83 -7.7 -4.68994 | gap 1, opp_overlap 2771464, overlap 2771465 2771468 2771469 TCCATGGACACAGGC CAGGGATCCCTGC-CTTTTC GCCT GAGGAGGGCGGGGATCCCGA TTTTTGCATGATGAT TERM 1958 2771468 - 2771508 + T 75 -11.2 -3.40674 | gap 1, opp_overlap 2771464, overlap 2771465 2771467 2771469 CCATGGACACAGGCC AGGGATCCCTGC-CTTTTC GCCT GAGGAGGGCGGGGATCCCG ATTTTTGCATGATGA TERM 1959 2771469 - 2771507 + T 78 -14.7 -2.63922 | gap 1, opp_overlap 2771464, overlap 2771465 2771468 2771467 CATGGACACAGGCCA GGGATCCCTGC-CTTTTC GCCT GAGGAGGGCGGGGATCCC GATTTTTGCATGATG CYA_2752 2773785 - 2771629 - | putative alpha-glucan phosphorylase CYA_2753 2775344 - 2774241 - | SpoIID/LytB domain-containing protein TERM 1960 2775435 - 2775423 - R 70 -3.3 -4.78839 | AACCGGAGAAGAAAA GAGAG CTA CACTC ACACGTCACTCCTCT CYA_2754 2776262 - 2775738 - | cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein TERM 1961 2776389 - 2776411 + H 71 -8.5 -3.90316 | gap 1, overlap 2776368 GTGGGTAGCGCCGGT CTGC-CTGAG CTTC CTCAGTGCAG TGTTTTTGGGGCAAT CYA_2755 2776450 - 2777682 + | S1C family peptidase TERM 1962 2777792 - 2777806 + F 79 -12.8 -3.53224 | opp_overlap 2777786 GCCATCCAAGCGCTC CGCGCC GCT GGCGCG TTTGCGACAGCCCTG TERM 1963 2778340 - 2778327 - g 76 -9.5 -4.07568 | GCTTTTGCGGCAAAA GGGGC CGCT GCCCC TGCCGGAGGCCCTGC TERM 1964 2778877 - 2778834 - g 78 -10.3 -4.03767 | gap 1 TCAAGAAGAGAAGAA GCCGCTGACCTTTGAGCCCG CCATC CGCACTCA-AGATCTGCGGC AACTGGAGCGGCTTC TERM 1965 2779473 - 2779497 + G 83 -7 -4.84359 | opp_overlap 2779464 AACCAACTTGGAAGC GCCCAAGGGC CATCT GCCGGTGGGC TTTTTCTGGGGATAC CYA_2756 2778001 - 2779584 + | protein kinase TERM 1966 2779607 - 2779589 - T 72 -2.3 -5.00616 | overlap 2779590 2779591 CCTGCCTGTAAAAAA CTTCCCC CTCCT GGGGATA CAAAGCCAGAACGGC TERM 1967 2779686 - 2779630 - T 79 -3.6 -5.06103 | gap 1, opp_overlap 2779634 2779684, overlap 2779631 2779634 AGAACGGCGAAAAAA GGGAGAGTGGACGCCTATCC-CCTCAA GAAA TCGAGGAGGATTGCCGGGCACTCTTCT CCAAAAGGGAGGTTG CYA_2757 2780014 - 2779652 - | hypothetical protein TERM 1968 2781008 - 2780982 - R 100 -12.2 -5.40474 | overlap 2780983 2780984 AGCTCTGTAAAAAAA CTCCCCTCTCCC CTT GGGAGAGGGGCT GGGGGTGAGAGGGTG TERM 1969 2781007 - 2780983 - R 100 -15.7 -3.83561 | overlap 2780982 2780984 GCTCTGTAAAAAAAC TCCCCTCTCCC CTT GGGAGAGGGGC TGGGGGTGAGAGGGT TERM 1970 2781006 - 2780984 - R 95 -19.2 -2.89655 | overlap 2780983 2780982 CTCTGTAAAAAAACT CCCCTCTCCC CTT GGGAGAGGGG CTGGGGGTGAGAGGG CYA_2758 2782305 - 2781031 - | oxidoreductase, FAD-dependent TERM 1971 2782729 - 2782746 + H 71 -8.4 -3.87364 | CAGATGGAGGAAGGT CGGCAG CTCGTC CTGCCG TTGTGTTGTTGTAAC TERM 1972 2782853 - 2782869 + G 70 -12.3 -3.24232 | overlap 2782851 2782861 GCAAGCCATCCAGCA GCTCCTC GGA GAGGAGC TCTCTTTGCCGACGC CYA_2759 2782776 - 2785574 + | cation transport ATPase CYA_2760 2786557 - 2785628 - | NAD-dependent epimerase/dehydratase family protein TERM 1973 2786671 - 2786684 + H 72 -2.3 -4.9792 | overlap 2786672 AGCGCGTTTCCGGGT TTGGC CATA GCCGG TTTTTCTCTGGGCTG TERM 1974 2786758 - 2786742 - H 71 -4.3 -4.62302 | overlap 2786751 GAAGACCCGGAAAAA GAGCCGA AAT CCGCCTC CGCCGTACCGGAGTA CYA_2761 2786900 - 2787499 + | hypothetical protein hemB 2788486 - 2787500 - | delta-aminolevulinic acid dehydratase TERM 1975 2788186 - 2788222 + g 82 -5.7 -4.87892 | CCGCCCGCTGGATGA GGCCCTCCGGGTTGA AGGATTC TCGCCCCGTGGGGTC TTTCTTTTCTTCGGG CYA_2764 2789589 - 2789711 + | hypothetical protein psbI 2789830 - 2789946 + | photosystem II reaction center I protein I CYA_2766 2790498 - 2790058 - | putative lipoprotein TERM 1976 2790630 - 2790617 - g 71 -8.1 -3.93038 | CAGCCCAAGAGCAAA TGCGC AATC GCGCA AAGATAGAAGGTCTT CYA_2768 2790553 - 2790654 + | hypothetical protein CYA_2767 2791283 - 2790651 - | BioY family protein CYA_2769 2791340 - 2792134 + | inositol monophosphatase family protein TERM 1977 2792568 - 2792587 + T 73 -5 -4.65933 | gap 1, overlap 2792566 GATGCTACTCATCGA CGCT-GAAG CTT CTTCTGGCG TTTCTTTTGCCACTG CYA_2771 2793019 - 2792561 - | hypothetical protein CYA_2773 2793174 - 2795138 + | sensor histidine kinase CYA_2772 2795275 - 2795117 - | hypothetical protein CYA_2774 2795845 - 2795279 - | putative cyclase/dehydrase CYA_2775 2796187 - 2795942 - | hypothetical protein TERM 1978 2796153 - 2796142 - G 82 -5.8 -4.95806 | overlap 2796143 2796144 AAACCAGCACAAAAA TGGC GATG GCCA CCGCGGCCACCAGCG TERM 1979 2796348 - 2796358 + G 76 -8.2 -4.19371 | ACCTTTGGCTGGGTT GCCG TTG CGGC TTTCTTCGCCCTTTC petN 2796321 - 2796410 + | cytochrome b6-f complex, subunit VIII CYA_2777 2796426 - 2796614 + | hypothetical protein CYA_2778 2797047 - 2796655 - | hypothetical protein TERM 1980 2796851 - 2796862 + g 72 -7.2 -4.12188 | overlap 2796843 AGGATCATGCAGCCG CGGC GGTT GCCG TTTTGCAGGTGGTAG CYA_2779 2799542 - 2797035 - | sensor histidine kinase CYA_2780 2800452 - 2799667 - | TatD family hydrolase CYA_2781 2800623 - 2801213 + | hypothetical protein TERM 1981 2802370 - 2802332 - g 86 -5.1 -5.16681 | gap 1 TGAAAAAGAACAAAA CGGTGCTGGTG-CAGGGC AATG GCGCTGTCGCCCGCAACG TCGCCAGTGGCGAAC CYA_2782 2801731 - 2802735 + | iron ABC transporter iron-binding subunit TERM 1982 2803056 - 2803074 + GF 83 -5.2 -4.98522 | overlap 2803052 2803058 AGATTTGCCGGGCCG CAGCATCC TGC GGGTGCTC TTTTTATCTCCCCTT TERM 1983 2803058 - 2803072 + GF 72 -7.8 -4.11141 | overlap 2803052 2803056 ATTTGCCGGGCCGCA GCATCC TGC GGGTGC TCTTTTTATCTCCCC TERM 1984 2804222 - 2804241 + GF 75 -4.2 -4.69464 | overlap 2804200 2804198 2804221 2804222 2804224 TGGCACCGGCCTTGA CAGCAGCG GTGT TGCTGGTG TTTTTGCAATCTTTT CYA_2783 2802736 - 2804442 + | iron ABC transporter permease CYA_2784 2804390 - 2804542 + | hypothetical protein TERM 1985 2804869 - 2804859 - g 93 -8.2 -5.10461 | opp_overlap 2804866, overlap 2804860 GCTATTCAACAAAAA GCCG CTC CGGC AGTGGTGCAGTGGTT TERM 1986 2805285 - 2805266 - g 72 -4.2 -4.56133 | gap 1, opp_overlap 2805276 2805277, overlap 2805267 GGCCAACAACGAAAA TGG-CCGTG CCG CCCGGGCCA CCCAGGTCTTTTTGG TERM 1987 2805661 - 2805644 - g 71 -5.5 -4.32048 | CAATAACACCGAAAA TGCTGCC GAAT GGCACCA AGTGACCGGCTATCT ugpB 2804598 - 2805950 + | glycerol-3-phosphate ABC transporter, glycerol-3-phosphate binding protein TERM 1988 2805994 - 2806015 + F 100 -11.5 -4.87318 | AAAATCTGAGGATGG GGGGTGGGC GGCG GCCTGCCCC TTTTTGGCTTTTGCA TERM 1989 2806098 - 2806122 + F 75 -9.1 -4.08767 | TGCTGGCGGGGTTGT CGGGGGCCCTC TGG GTGGGATCCCG TTTTCGGCGCATCGA upgA 2806202 - 2807254 + | glycerol-3-phosphate ABC transporter, permease protein CYA_2787 2807713 - 2807279 - | hypothetical protein rpsO 2808024 - 2807749 - | ribosomal protein S15 TERM 1990 2808332 - 2808352 + G 72 -3.9 -4.56597 | overlap 2808324 GTCGACCCGGCTGCC CTTTTGCCG ATT CTGCAACAG TTTTTGCGAGAGGAC CYA_2789 2808113 - 2808793 + | phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit-like protein apcD 2809345 - 2808860 - | allophycocyanin alpha, B subunit pilT-2 2810900 - 2809533 - | twitching mobility protein PilT folE 2811831 - 2811142 - | GTP cyclohydrolase I CYA_2793 2812680 - 2811955 - | short chain dehydrogenase CYA_2794 2812905 - 2814101 + | iron ABC transporter ATP-binding protein TERM 1991 2814292 - 2814275 - f 73 -8.4 -4.18494 | GATCCCCACCCAAAA CGAGGG CTTTAC CCCTCG ACAGGGGTTGAGCAA CYA_2795 2814557 - 2815450 + | chloroplast envelope protein translocase (CEPT or Tic-Toc) family protein CYA_2796 2815492 - 2816349 + | HemK family methyltransferase CYA_2797 2816491 - 2817261 + | sensor histidine kinase CYA_2798 2817688 - 2817287 - | putative photosystem II protein CYA_2799 2817785 - 2818501 + | NnrU family protein CYA_2800 2820454 - 2818865 - | putative hydantoin utilization protein B trx-3 2818536 - 2818928 + | thioredoxin CYA_2802 2820759 - 2820451 - | hypothetical protein TERM 1992 2820718 - 2820697 - G 72 -2.1 -4.68506 | overlap 2820689 2820699 AAGCAAGGCTAAAAA CAGCAGCCC ATTG AGGCCGCAA ACCACCCAAACTGCC CYA_2803 2821531 - 2820791 - | PDZ domain-containing protein pip 2822518 - 2821568 - | prolyl aminopeptidase CYA_2805 2824759 - 2822552 - | glycosy hydrolase family protein CYA_2806 2824935 - 2825477 + | HNH endonuclease domain-containing protein TERM 1993 2825868 - 2825852 - g 86 -13.7 -3.87815 | GGCTATGCCGAGAAA GTGCCGG TGG CCGGCAC CTACGTCATGGGATC CYA_2807 2825525 - 2826088 + | CpeS-like protein TERM 1994 2826811 - 2826793 - g 72 -8 -4.14739 | opp_overlap 2826793 GCAGGTATTTGAAAA GGCGGCCA AGT CGGCCCCC TGTCTGGTGTTCATC CYA_2809 2826212 - 2828101 + | AAA family ATPase glcD 2829564 - 2828098 - | glycolate oxidase, subunit GlcD TERM 1995 2830419 - 2830437 + G 72 -2.3 -4.7416 | gap 1, overlap 2830421 CCTGTTTGAGCTGAT CCGC-GCC TCCG GGCTGCAG TTTTTGCGCTTTTCC CYA_2810 2829694 - 2830884 + | hypothetical protein rpmI 2831007 - 2831207 + | 50S ribosomal protein L35 rplT 2831330 - 2831686 + | 50S ribosomal protein L20 CYA_2814 2831691 - 2832491 + | amino acid transporter, amino acid-binding protein purH 2834101 - 2832488 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1996 2833189 - 2833199 + g 71 -8.2 -3.8917 | TTGGGCGAACGGCTA CCCC ACA GGGG TTGTTGTGCTTGACA TERM 1997 2833228 - 2833261 + g 74 -13.2 -3.28712 | gap 1, opp_overlap 2833219, overlap 2833231 CAATCACCGCCACCG CTG-GCCTAGGGCCG TTGGC CAGCCCTAGGCTCAG TTCTGCCGCCAGGGC TERM 1998 2833231 - 2833257 + g 71 -13.7 -2.59431 | opp_overlap 2833219, overlap 2833228 TCACCGCCACCGCTG GCCTAGGGCCG TTGGC CAGCCCTAGGC TCAGTTCTGCCGCCA TERM 1999 2834437 - 2834458 + G 71 -5.8 -4.25256 | CTCAGTCTTCTCGGT GGCCTGTT GCATCG AGCGGGCC TTGTTTTGGTGGAAA CYA_2815 2834360 - 2835076 + | MotA/TolQ/ExbB family proton transporter CYA_2816 2835080 - 2835505 + | ExbD/TolR family proton transporter argF 2836483 - 2835539 - | ornithine carbamoyltransferase prc-2 2837884 - 2836589 - | C-terminal processing peptidase CYA_2819 2838101 - 2837907 - | hypothetical protein proA 2838133 - 2839500 + | gamma-glutamyl phosphate reductase CYA_2821 2839764 - 2840309 + | putative RNA-binding protein CYA_2822 2840401 - 2841195 + | DSBA thioredoxin domain-containing protein TERM 2000 2841380 - 2841339 - g 74 -4.9 -4.65895 | opp_overlap 2841362, overlap 2841318 2841317 2841341 CGCGCCAGGGAAAAA CGGGGCAGCTACGACCTGA CGGG CCAGGTGGCCGCCGCCGAG TTCTGGCAACTGTTG CYA_2823 2841219 - 2841914 + | HNH endonuclease domain-containing protein CYA_2824 2843173 - 2841989 - | sporulation and cell division repeat-containing protein CYA_2825 2843699 - 2843283 - | hypothetical protein TERM 2001 2843492 - 2843481 - G 73 -3.6 -4.72986 | GATGGCGATGAAAAA CCGC AAGC GCAG CAGCACCTCCAATTT TERM 2002 2843933 - 2843949 + G 72 -12.3 -3.34517 | overlap 2843931 GCGGCCTCTCCAGCC CTGCTGC CGT GCAGCAG TATTTGCAGCCGGAT TERM 2003 2844211 - 2844183 - g 73 -10.9 -3.62046 | CTATGGCCTCAACAA CCGCATGGTGCAG GAG CTGCACCGCGAGG GGGTACGCCTCATCC recJ-2 2843803 - 2846259 + | single-stranded-DNA-specific exonuclease RecJ CYA_2827 2846282 - 2846947 + | Ser/Thr protein phosphatase family protein TERM 2004 2847531 - 2847517 - g 76 -7.1 -4.40561 | overlap 2847514 2847519 CCGGCGCAAAAAGAA GCGGT CGGCC ACCGC GGCCAGGCCCTGAGA rdgB 2846998 - 2847591 + | non-canonical purine NTP pyrophosphatase CYA_2829 2847784 - 2848905 + | hypothetical protein tmk 2848921 - 2849535 + | thymidylate kinase TERM 2005 2850236 - 2850252 + G 72 -13.7 -2.77899 | overlap 2850233 TGCCCCATCTTTTGG CGCCGCT AGT AGCGGCG TGGTTCCTGCAGCCG CYA_2831 2849659 - 2850645 + | CHAD domain-containing protein CYA_2832 2850743 - 2851807 + | polyamine transporter, polyamine-binding protein CYA_2833 2852084 - 2851884 - | hypothetical protein CYA_2834 2851881 - 2852051 + | CAB/ELIP/HLIP family protein CYA_2835 2852207 - 2852088 - | hypothetical protein CYA_2836 2856835 - 2852264 - | sensory box histidine kinase/response regulator TERM 2006 2855536 - 2855524 - G 74 -9.1 -3.93695 | GCGAGTAGCCAGAAA GCTGC TCG GCAGC GCGGTTGAAGCGCAG TERM 2007 2856787 - 2856802 + g 74 -2.4 -4.8622 | overlap 2856781 2856796 TCTGATACTGCCGCA GGGCAG CCAG CCGCTC TTTTTCGTTGGGAGG CYA_2837 2857206 - 2857583 + | hypothetical protein TERM 2008 2857610 - 2857634 + F 78 -4.3 -5.00616 | gap 1, opp_overlap 2857610 2857611 2857614, overlap 2857611 GCTCTTGTAAGTAAA G-GCAGAGCT GAAAAA GGCTCTGCTC TTTTTTGCCCAAGCA TERM 2009 2857611 - 2857632 + F 73 -8 -4.13561 | opp_overlap 2857610 2857611 2857614, overlap 2857610 CTCTTGTAAGTAAAG GCAGAGCT GAAAAA GGCTCTGC TCTTTTTTGCCCAAG TERM 2010 2857962 - 2857975 + G 73 -6.7 -4.25104 | TTGGGAGCTAAGTCT GCAGA TGCC TCTGC TTTTCCTGAGCGCGA TERM 2011 2858177 - 2858165 - g 91 -9.1 -4.42386 | opp_overlap 2858165 CTTGGATCTAGAAAA GGCCA ACT TGGCC TTGGCTCGTATCAAG CYA_2838 2857857 - 2858252 + | hypothetical protein CYA_2839 2858386 - 2858478 + | hypothetical protein tgt 2859006 - 2860109 + | queuine tRNA-ribosyltransferase TERM 2012 2860713 - 2860701 - g 74 -4.7 -4.56597 | GCTTGTCCCTAAAAA CGGGC ATT GACCG CATCCGCCTAGAAAA CYA_2842 2860211 - 2860822 + | hypothetical protein CYA_2843 2860886 - 2862127 + | hypothetical protein CYA_2844 2862134 - 2862430 + | hypothetical protein CYA_2845 2862567 - 2862965 + | ISSoc4, transposase orfA CYA_2846 2863004 - 2863513 + | ISSoc4, transposase orfB TERM 2013 2863956 - 2863931 - g 86 -8.3 -4.58395 | TTTAGCCCTGAAAAA TCAGATCGAGG CAAT CCTCTACCTGA AGGGACAGCCGTTGG scpB 2863854 - 2864408 + | segregation and condensation protein B TERM 2014 2864555 - 2864535 - T 78 -12.6 -3.35526 | overlap 2864530 GAACCATAAAGTCAA GGATCCCC TCGGC GGGGATCC AGAGAAAGGAATCAC CYA_2849 2865265 - 2864615 - | anti-oxidant AhpCTSA family protein TERM 2015 2865794 - 2865811 + G 74 -5.5 -4.41348 | opp_overlap 2865794 2865793, overlap 2865782 2865796 CGATCCCTGGCAAAT TGCCGAG GATT CTCGGGA TTTATTTGAGGCGGC CYA_2850 2865498 - 2866601 + | hypothetical protein CYA_2851 2867733 - 2866651 - | small conductance mechanosensitive ion channel (MscS) family protein TERM 2016 2867344 - 2867358 + g 81 -4.2 -5.03314 | opp_overlap 2867329, overlap 2867343 CAGCAAGCTTTGCTC GGTGGT GGC ATCGCC TTTTTTGCGCATCAG TERM 2017 2867682 - 2867671 - G 81 -4.4 -4.96106 | TACAAAGATGAAAAA TACC AGCA GGTA GTTCCAAAGGGGGTT CYA_2852 2868757 - 2867888 - | phospholipase/carboxylesterase TERM 2018 2868305 - 2868292 - G 72 -3.7 -4.54727 | overlap 2868293 GTCCGTAAACCAAAA TCCGC TCCG GCGGG ATCCCCTGCTCCACC CYA_2853 2869464 - 2868880 - | CAAX amino terminal protease family protein CYA_2854 2870695 - 2869616 - | polysaccharide pyruvyl transferase CYA_2855 2871414 - 2871121 - | hypothetical protein CYA_2856 2871556 - 2873538 + | 1A family penicillin-binding protein CYA_2857 2873535 - 2873894 + | hypothetical protein TERM 2019 2874308 - 2874323 + G 75 -3.2 -4.84359 | CAACAATGCCGCCCA GGTCTG GAAC CACACC TTTTTCTGGGAATCC TERM 2020 2874440 - 2874392 - g 71 -11 -3.41745 | gap 1, opp_overlap 2874400, overlap 2874436 2874437 CGCCGACAAGATCAA CGCCGATTTTGGCGGCTACGACA AGTT TGTCGAGGCCTTCAAAA-CGGCG GCGGCCACCCAGTTT sodB 2874084 - 2874683 + | superoxide dismutase, Fe TERM 2021 2874753 - 2874770 + T 100 -11.3 -5.76949 | CCAGCTCTTTGCTAG GGGATCC TCAG GGATCCC TTTTTTTTCGGCCTA CYA_2859 2876375 - 2874783 - | serine/threonine protein kinase CYA_2860 2876391 - 2876576 + | hypothetical protein CYA_2861 2876637 - 2878715 + | monovalent cation:proton antiporter-2 (CPA2) family protein TERM 2022 2879053 - 2879075 + F 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC TERM 2023 2879977 - 2879989 + G 72 -4.1 -4.66833 | GGCGGTTTTGGGGCG CTTTG AGC CAGAG TTTTTGCGCTTGCCC TERM 2024 2880140 - 2880184 + G 100 -10.6 -4.82901 | gap 1, opp_overlap 2880148 TCGGAGCGGATCGGG GCAGGCAACAGCCGGGTGGTG CGGG CAC-GCCTGGCCGATGCCCGC TTTTTCTACGAAGAG glyS 2879174 - 2881366 + | glycyl-tRNA synthetase subunit beta CYA_2863 2882332 - 2881409 - | fructosamine kinase family protein CYA_2864 2882792 - 2882340 - | hypothetical protein CYA_2865 2883444 - 2882905 - | putative small GTP-binding protein CYA_2866 2884055 - 2883501 - | hypothetical protein CYA_2867 2884477 - 2884109 - | roadblock/LC7 domain-contain protein TERM 2025 2884369 - 2884315 - G 82 -11.4 -4.03234 | gap 1, opp_overlap 2884331 GTTCCCCCAGAGAAA GCATAGCC-GCCGACATGGCCGATG CCCTTT CTTCGTCCATGCCTGCCGGCAATGC AGAGGCCAGAGGCAA CYA_2868 2885483 - 2884602 - | hypothetical protein CYA_2869 2886651 - 2885818 - | hypothetical protein CYA_2870 2887649 - 2886813 - | hypothetical protein CYA_2871 2890445 - 2887938 - | copper-translocating P-type ATPase CYA_2872 2890807 - 2890538 - | hypothetical protein fabF 2892085 - 2890820 - | 3-oxoacyl-(acyl carrier protein) synthase II acpP 2892428 - 2892183 - | acyl carrier protein rpsF 2892660 - 2892950 + | ribosomal protein S6 CYA_2876 2893038 - 2893436 + | putative single-strand binding protein CYA_2877 2893463 - 2894092 + | zinc carboxypeptidase TERM 2026 2894804 - 2894794 - g 77 -2.4 -5.0133 | GAGGCTCTGAAAAAA GCAG CCT CAGC CAAAGAAGAGACAAC CYA_2878 2894125 - 2894838 + | universal stress protein CYA_2879 2896280 - 2894859 - | hypothetical protein CYA_2880 2897866 - 2896298 - | hypothetical protein CYA_2881 2898676 - 2897891 - | hypothetical protein CYA_2882 2899683 - 2898673 - | ABC transporter, ATP-binding protein purM 2900941 - 2899886 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 2027 2900498 - 2900472 - G 83 -7.9 -4.66163 | opp_overlap 2900488 ATCCCGACGCAAAAA CCCGCCAGG TCGTACTTG CCGGGCGGG TAAAACCCCGGCATC TERM 2028 2900652 - 2900636 - G 72 -2.1 -4.7373 | overlap 2900638 GTAGTCCAGGAAAAA CAGCGGC CTG GCCCCCA CCGTCAGCACATCGT TERM 2029 2901935 - 2901889 - g 76 -10.1 -3.96148 | gap 2 CCCGCCGATCAGAAA CTCAGGCCCAGGCGCAACCGGAC TCT GTCCGAGTG-GTC-GGGCCTGTG CAAGAAGGGATCGCC CYA_2884 2901087 - 2902190 + | rare lipoprotein A family protein CYA_2885 2903213 - 2902191 - | response regulator CYA_2886 2906293 - 2903225 - | sensory box histidine kinase TERM 2030 2903537 - 2903515 - G 83 -7.6 -4.54047 | opp_overlap 2903514, overlap 2903517 TCAGGCCACACAAAA CTGCCTCATC GAG GTTGAGGCGG ATCCCTTCGGCGCGG TERM 2031 2905167 - 2905156 - G 76 -5.8 -4.64766 | GGCAGAGGCGAAAAA CCAC ATCG GTGG GTTGGCCCTGAAGTT TERM 2032 2905210 - 2905195 - G 74 -4.6 -4.56597 | GTTGGGCTTGAAAAA TGGCGG GGAA CAGCCA GCGATCGTCAGGGTG prs 2907451 - 2906453 - | ribose-phosphate pyrophosphokinase CYA_2888 2907571 - 2909103 + | sugar ABC transporter, ATP-binding protein TERM 2033 2909312 - 2909334 + F 77 -11.4 -3.55444 | CGACACGGAAACTGC GCTTTGGGTA TTC TACTCAAAGC TTTGCGGGATACCGC TERM 2034 2910542 - 2910559 + G 81 -7.7 -4.4648 | gap 1, overlap 2910538 CTGGAGCTTGGGGCC GCAGGAGC TTC GC-CCTGC TTTTGTCCTGGGGAT TERM 2035 2911215 - 2911229 + G 74 -5.6 -4.40804 | opp_overlap 2911215 AGGAGCGGTCCAGAA GCCGGT GAG ACAGGC TTTTCTGGGCTGGTG TERM 2036 2912386 - 2912412 + G 84 -10.8 -4.2018 | overlap 2912381 CAGTGGCTCTGACCC TGGCCTCTGGGA CTG TCCTGGTGGCCA TTGTTTTGCGGCTTT TERM 2037 2912436 - 2912446 + G 80 -4.6 -4.82901 | overlap 2912432 CGGCTTTGGGTGGAA GTGG CTC CCGC TTTTTATCGCGACGG TERM 2038 2913560 - 2913574 + G 76 -7 -4.46212 | opp_overlap 2913550, overlap 2913522 GAATACAGCCTTGGT GCTGCC CCT GGCCGC TTTTCTGGTAACCGC CYA_2889 2909517 - 2914181 + | TM2 domain-containing protein TERM 2039 2915293 - 2915313 + G 76 -9 -3.99228 | AAGAGATGGGCTTTG TCGGCACC CTGAC GGTGCTGA TTCTGTTTTGGATTC CYA_2890 2914272 - 2915582 + | putative rod shape-determining protein RodA CYA_2891 2915932 - 2917158 + | aminotransferase, class V CYA_2892 2917183 - 2917791 + | hypothetical protein TERM 2040 2917767 - 2917779 + T 73 -9.1 -3.89822 | GTTTGCGGTGATGTG GCTGG TCA CCAGC TTTCTGCGCTAGCTG uppS 2918697 - 2917951 - | undecaprenyl diphosphate synthase TERM 2041 2918573 - 2918586 + g 76 -5.9 -4.56597 | opp_overlap 2918544, overlap 2918546 TGATGCCCGACACTG CGGGG CAAG CCTCG TTTTTGCGCCCACCG CYA_2894 2919626 - 2918703 - | hypothetical protein lysA 2921238 - 2919862 - | diaminopimelate decarboxylase TERM 2042 2921588 - 2921572 - R 70 -12.3 -2.62983 | CTCAGTGGCAGAGCA CCCCCTT GGT AAGGGGG AGGTCACGAGTTCAA miaB 2922979 - 2921618 - | tRNA-i(6)A37 thiotransferase enzyme MiaB purA 2924511 - 2923162 - | adenylosuccinate synthetase TERM 2043 2924561 - 2924547 - R 81 -2.7 -5.27923 | overlap 2924548 GAACGGCACAAAAAA TCCCC TTTGC GGGGT CGCTGCACTAATTTA CYA_2900 2926240 - 2924669 - | S41 family peptidase TERM 2044 2925399 - 2925426 + g 75 -13.4 -3.05844 | gap 1 CTGGCTCCCAACTGG GCCGCCAGGAGGG TGG CCC-CCTGGCGGG TGTTGCCGTCGACCA CYA_2901 2926956 - 2926369 - | hypothetical protein CYA_2902 2928259 - 2926874 - | hypothetical protein TERM 2045 2927781 - 2927794 + gr 77 -2.3 -5.0133 | TGAGCCACCACTACC CACTG ACCA CCGTG TTTTTTAAGCAAATA smc 2931908 - 2928366 - | chromosome segregation protein SMC rnpA 2932364 - 2931984 - | ribonuclease P rpmH 2932595 - 2932455 - | 50S ribosomal protein L34