TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.512524 %AT, 4431967 nt, 34575 terms. Intergenic: 0.587918 %AT, H2T: 644751 nt, 4924 terms; T2T: 129717 nt, 2948 terms; H2H: 150738 nt, 2397 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|219666071|ref|NC_011830.1| Desulfitobacterium hafniense DCB-2, complete genome (length 5279134) TERM 1 412 - 402 - g 71 -8.2 -3.66178 | TCTTCTAATTCTAAA GCGG AAC CCGC GGACAATAAAACCCT TERM 2 1179 - 1189 + G 73 -2.4 -5.06735 | opp_overlap 1179 GAAATGATTCAGCAA GCGG TGG CCGA TTTTTATCATTTGTC Dhaf_0001 93 - 1442 + | chromosomal replication initiator protein DnaA TERM 3 1513 - 1544 + F 78 -6 -4.81685 | AAACGAGTTTGTTAA CATGTGGATAAATT CAAG GATTAATTCACATG TTTTTACTCATTCCT Dhaf_0002 1698 - 2801 + | DNA polymerase III, beta subunit TERM 4 3144 - 3155 + G 93 -2.2 -6.06723 | CAGAATATGTCGGGA CCAT TAAT GTGG TTTTTTTTTCACCGG Dhaf_0003 2816 - 3913 + | DNA replication and repair protein RecF Dhaf_0004 3917 - 4174 + | hypothetical protein TERM 5 4217 - 4188 - f 70 -7.2 -3.75292 | opp_overlap 4188, overlap 4192 AGGCAGGATCAAGAA GAAACCTCTCTA AGTCTG CAGTGAGGTTTC TTTGATTGTGTTAGC TERM 6 4262 - 4243 - f 72 -8 -3.86346 | opp_overlap 4239 TTAGCCTGGGATAAA TCCTTTAT TTGA ATAAAGGA TTGAAAGGTCGTATA TERM 7 4982 - 4958 - g 85 -5.7 -5.06414 | opp_overlap 4958 TTTCTTGAATAAAAA GGTATCGATTA CCT TGATCGATGCC AGAGAAGACAAGAAA Dhaf_0005 4326 - 6260 + | DNA gyrase, B subunit Dhaf_0006 6274 - 8760 + | DNA gyrase, A subunit Dhaf_0007 8875 - 9447 + | SNO glutamine amidotransferase Dhaf_0008 9478 - 10743 + | seryl-tRNA synthetase TERM 8 10949 - 10977 + F 100 -8.2 -5.06451 | TTATGGAGATCTGAA GTTCGTAGTTCG ATACG CGAGTTACGGAC TTTTTTACAATAGTA TERM 9 11263 - 11239 - g 74 -4.3 -4.93365 | gap 1, opp_overlap 11255 GCTCATAATGAAAAA GAGCTG-AGG CAGGAC CCTACAGCCC ATGCTGAAGTTTTGG Dhaf_0009 11110 - 11556 + | CMP/dCMP deaminase zinc-binding TERM 10 11715 - 11738 + T 100 -10.4 -4.87291 | opp_overlap 11715 CCATTGTAAATGAGA TCCGCATTAG TAAG TTAATGCGGA TTTTTAATTGGAATA TERM 11 11738 - 11715 - T 73 -9.7 -3.01497 | opp_overlap 11715 CCATTGTAAATGAGA TCCGCATTA GTAAGT TAATGCGGA TTTTTAATTGGAATA TERM 12 11852 - 11836 - T 81 -4.3 -5.38047 | opp_overlap 11836 GAGGGAGATAAAAAA TGCGCCC TTA GGAAGCA TTTTCCCGACCCGGC TERM 13 12600 - 12559 - T 100 -8.2 -5.5112 | gap 2, opp_overlap 12560 12565, overlap 12561 TTGATTAACAAAAAA GA-GGAACCATGCA-TCCTC TGGA GAGAATTGCCTGGTTCCATC TTAACGCTTATTTTT TERM 14 12597 - 12561 - T 100 -11 -4.39002 | gap 1, opp_overlap 12560 12565, overlap 12559 GATTAACAAAAAAGA GGAACCATGCA-TCCTC TGGA GAGAATTGCCTGGTTCC ATCTTAACGCTTATT Dhaf_0011 13465 - 12608 - | transcriptional regulator, AraC family TERM 15 14187 - 14198 + G 78 -5.8 -4.67607 | opp_overlap 14165 14186 14187, overlap 14186 CGCTGAAGGAAAGAG CTGC ATCC GCAG TTTGTTTATTGCAGG Dhaf_0012 13703 - 14269 + | hypothetical protein TERM 16 14384 - 14338 - T 100 -21.3 -3.54051 | opp_overlap 14343, overlap 14343 ATAAAGTCGATATAA GAAAAGAGGAGGATAACAC AAGGTATCA GTGTTATCCTCCTCTTTTC TGGCAGGTAATGCCT TERM 17 14379 - 14343 - T 100 -15.4 -4.84311 | opp_overlap 14343, overlap 14338 GTCGATATAAGAAAA GAGGAGGATAACAC AAGGTATCA GTGTTATCCTCCTC TTTTCTGGCAGGTAA TERM 18 14343 - 14379 + T 100 -15.4 -4.37886 | opp_overlap 14343 14338 GTCGATATAAGAAAA GAGGAGGATAACAC AAGGTATCA GTGTTATCCTCCTC TTTTCTGGCAGGTAA Dhaf_0013 14706 - 14401 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 19 14508 - 14527 + g 70 -2.1 -4.90525 | opp_overlap 14480 14472 CATCTTTGGTAGCAC CGACAAG CCACGC CTTATCG TTTTCTTTGAGGTTC TERM 20 14767 - 14728 - H 100 -14.6 -3.64703 | opp_overlap 14727 14724 14761 CTCTCCTTATGTAAA GTACTAGATAGCTATTTA CTCT TAAATTGCTACCTAGTAC AATATTAGTATAATA Dhaf_0014 14830 - 15195 + | transcriptional regulator, HxlR family TERM 21 15250 - 15218 - f 100 -17.9 -2.66106 | opp_overlap 15219 15223, overlap 15223 GACTTCAATAAGCTA TTAAATGGTCCGTGC TCG GCACGGACCATTTAT CTTTTCCCATCAAAT TERM 22 15219 - 15249 + F 100 -21.4 -3.6692 | opp_overlap 15218 15223, overlap 15223 ACTTCAATAAGCTAT TAAATGGTCCGTGC TCG GCACGGACCATTTA TCTTTTCCCATCAAA TERM 23 15245 - 15223 - f 100 -17.8 -3.81929 | opp_overlap 15219 15223, overlap 15218 CAATAAGCTATTAAA TGGTCCGTGC TCG GCACGGACCA TTTATCTTTTCCCAT TERM 24 15223 - 15245 + F 100 -17.8 -4.45771 | opp_overlap 15223 15218, overlap 15219 CAATAAGCTATTAAA TGGTCCGTGC TCG GCACGGACCA TTTATCTTTTCCCAT TERM 25 15456 - 15436 - g 71 -4 -4.7254 | gap 1 ACTGCCCATCAAAAA TTGC-AGGC TTAT GCCCAGCAA GCAACCGATCCTGAA Dhaf_0015 15361 - 15546 + | hypothetical protein Dhaf_0016 15560 - 15808 + | Coat F domain protein TERM 26 15854 - 15886 + F 100 -11.4 -4.58424 | opp_overlap 15856, overlap 15856 15861 TTGGAATGCGAACGA TAGAAAAGCTTGGC TATAT GCCGGGCTTTTCTG TTTTATATAGTAATC TERM 27 15856 - 15884 + F 100 -11.8 -3.89814 | opp_overlap 15856, overlap 15854 15861 GGAATGCGAACGATA GAAAAGCTTGGC TATAT GCCGGGCTTTTC TGTTTTATATAGTAA TERM 28 15861 - 15879 + F 82 -5.9 -4.95843 | opp_overlap 15856, overlap 15856 15854 GCGAACGATAGAAAA GCTTGGC TATAT GCCGGGC TTTTCTGTTTTATAT Dhaf_0017 16151 - 17281 + | diguanylate cyclase Dhaf_0018 18852 - 17386 - | ABC transporter related TERM 29 18705 - 18722 + g 80 -6.3 -4.77438 | opp_overlap 18705 CTAATTCTCCAAGCA GCACTTT GAGG AGAGTGC TTTTTCCTGCTCCGT TERM 30 18947 - 18910 - H 100 -9.9 -5.46657 | TATGGCAATAAAAAA TGCAGATCGCCAGCC TCTAGATG GGCTTTCGATCTGCA TATCAACGAAAAAAG Dhaf_0019 19308 - 19514 + | transcriptional regulator, XRE family Dhaf_0020 19511 - 19975 + | hypothetical protein TERM 31 19997 - 19985 - f 70 -7.7 -3.67705 | AGATAGAAATTAGAA GCTAG AAG CTAGC AGTGGAGATAAGAGA TERM 32 20777 - 20789 + G 77 -4.8 -4.97402 | TTGATGGCAGAAACG GGCT GCCAA AGCC TTTTTATCGGTTTTG Dhaf_0021 20015 - 21352 + | Radical SAM domain protein TERM 33 21478 - 21497 + F 70 -5.7 -4.4009 | overlap 21480 21484 AATAGGCCTGCGGTC TATCGGC GGCGGA GCCGATG TTTTCTAAAGTCACC Dhaf_0022 21535 - 21849 + | hypothetical protein TERM 34 22459 - 22471 + G 71 -4.7 -4.54047 | opp_overlap 22460, overlap 22460 GAGGATGAGCGGGAA ACCGC CAG GCGGA TTTTGTATAAAATGC Dhaf_0023 22069 - 22524 + | transcriptional regulator, TrmB TERM 35 22613 - 22603 - g 70 -2.4 -4.93365 | CCTTATAAGGAAAAA GGCG AAG CCCC CAGGCAAAGCACTCT Dhaf_0024 22549 - 22956 + | protein of unknown function UPF0066 TERM 36 23188 - 23210 + F 70 -2.7 -4.96996 | TAATAAAACTACAAT TCATTTTCC GGAGG GGAGGGTGA TTTATTTTCTTTGCC TERM 37 23421 - 23403 - g 75 -10.2 -3.34344 | overlap 23415 23418 TCAGCCGCCAACCAA CCGGCGGA AAA CCCACCGG CTGAAAAAGCAGTTG TERM 38 23804 - 23790 - g 74 -6.4 -4.42806 | overlap 23798 CTACCCGTAAAGAAA GAAACC ACC GGTTCC ATAACCATTAAGGAT TERM 39 24274 - 24258 - g 75 -5.8 -4.60487 | opp_overlap 24258 24260, overlap 24260 CAGGAGGGGGAAAAA GCCGCT GAAGT AGCAGC GTTCATAGATAAGCA TERM 40 24428 - 24453 + G 71 -6.7 -4.21812 | overlap 24424 GCCGATTGCTATTGC CGGCGGCGACA ATAT TGCCGATGCCG TTCTTTTAGATAAAG Dhaf_0025 23310 - 24863 + | FMN-binding domain protein TERM 41 25428 - 25439 + G 72 -5.8 -4.33956 | TCTTTGCCCTTATGG TGGC TGTG GCCA TTTATATCTTTTCCC TERM 42 25490 - 25506 + G 85 -5.1 -5.2853 | ACGGCCATTATCCTC TTCGGTG TGG CGCTGAA TTTTCTTTTTAACTC Dhaf_0026 25046 - 26041 + | transport system permease protein TERM 43 26090 - 26064 - g 82 -10.4 -3.81027 | GGTAAGTAATTTAAA CTTTTCCTATAA AGG TTATAAGAAAAG CAAAGGCTCCCATAA Dhaf_0027 26041 - 26835 + | ABC transporter related Dhaf_0028 27706 - 26891 - | hypothetical protein TERM 44 27788 - 27832 + r 100 -24 -5.1101 | opp_overlap 27788 27792 GCAGCAAAACACCAA TAAACGGACTTTTCCTATGC ATCCG GCATAGGGAAAGTCCGTTTA TTTTTTCACTGGTGC TERM 45 27832 - 27788 - R 100 -21.8 -3.55966 | opp_overlap 27788, overlap 27792 GCAGCAAAACACCAA TAAACGGACTTTTCCTATGC ATCCG GCATAGGGAAAGTCCGTTTA TTTTTTCACTGGTGC TERM 46 27828 - 27792 - R 100 -18.2 -4.38843 | opp_overlap 27788, overlap 27788 CAAAACACCAATAAA CGGACTTTTCCTATGC ATCCG GCATAGGGAAAGTCCG TTTATTTTTTCACTG TERM 47 27886 - 27900 + r 100 -9.2 -4.87133 | opp_overlap 27884 27885 GATATGAATCAAAGG CTCGGC GAA GCCGGG TTTTCTTTAGCAGCT Dhaf_0029 28382 - 27879 - | iron dependent repressor Dhaf_0030 28525 - 29466 + | periplasmic solute binding protein TERM 48 30084 - 30064 - g 78 -6.2 -4.70266 | gap 1, overlap 30066 AAGAGCAGGGAAAAA CAGTGATGG TGGT CCATCAC-G ATCTGCAGACAGTGG TERM 49 30083 - 30066 - g 79 -9.9 -3.95883 | overlap 30064 GAGCAGGGAAAAACA GTGATGG TGGT CCATCAC GATCTGCAGACAGTG Dhaf_0031 29478 - 30233 + | ABC transporter related TERM 50 30757 - 30771 + G 71 -7.1 -4.07568 | TTTGACAGTGATTTT GCCCA TAATC TGGGC TTTTCCCCCAAGAAG Dhaf_0032 30235 - 31158 + | ABC-3 protein TERM 51 32028 - 32016 - g 75 -3.3 -5.08824 | GCCGCAGTCAAAAAA TAGGC TTT GCCAA AATGATACTTTTGCT Dhaf_0033 31142 - 32245 + | ABC-3 protein TERM 52 32261 - 32287 + F 93 -2.3 -6.23545 | gap 1, opp_overlap 32259 32262, overlap 32262 GCTGTCAAGAAAAGA GGGATATC-CCT GTGA AGGAGGTATCCA TTTTTTTTGTTTCAG TERM 53 32262 - 32286 + F 70 -5.8 -4.31687 | gap 1, opp_overlap 32259 32262, overlap 32261 CTGTCAAGAAAAGAG GGATATC-CCT GTGA AGGAGGTATCC ATTTTTTTTGTTTCA Dhaf_0034 32272 - 32412 + | hypothetical protein TERM 54 32653 - 32671 + F 100 -5.3 -6.09196 | gap 1, opp_overlap 32652 32653, overlap 32653 ATACAGGATAGAAAG CCC-TTCC GTTT GGAAAGGG TTTTTTTGTTTTGGG TERM 55 33931 - 33913 - g 83 -4.5 -5.26875 | GGTTTAATGAAAAAA CGGTCAT TGAGG ATGGCCG GGTTGAAGAGGCCAA Dhaf_0035 32886 - 34526 + | extracellular solute-binding protein family 5 TERM 56 34606 - 34556 - f 89 -11.3 -3.40899 | gap 2, opp_overlap 34556 AACGCTCTATCAGAA CAGGTGCGTCTGAAACGCC--TGCC CGA AGCATTGGCGTTTTGAACGCACCTG TTTGAATGGGGCCGC TERM 57 34556 - 34606 + F 100 -12.8 -3.64703 | gap 2, opp_overlap 34556 AACGCTCTATCAGAA CAGGTGCGTCTGAAACGCC--TGC CCGAA GCATTGGCGTTTTGAACGCACCTG TTTGAATGGGGCCGC TERM 58 35187 - 35205 + G 85 -10.3 -4.07618 | ATGCCGATGTTACTT TGGCGGA CCGCC TCCGCCA TTTCATTCTTCCCGC Dhaf_0036 34646 - 35623 + | binding-protein-dependent transport systems inner membrane component TERM 59 36198 - 36220 + G 75 -10.6 -3.35046 | opp_overlap 36203, overlap 36195 36195 CCCTTGGTATATTGC CAGAAGGCAT GTC ATGCCTTCCG TATTTCCGCAAATCA Dhaf_0037 35617 - 36486 + | binding-protein-dependent transport systems inner membrane component TERM 60 36903 - 36884 - g 72 -5.8 -4.40181 | gap 1 AAAGAGCACAAGAAA GGCAGAACA GGC TGTT-TGCC CATTACGGATTAAAA Dhaf_0038 36499 - 37311 + | ABC transporter related TERM 61 37672 - 37703 + G 75 -5.8 -4.57755 | gap 1, overlap 37671 GGCGGAAGCGCTGGC CCATCG-AGCTCTCC GGC GGAGAGCTGCAGCGG TTTTGTATCGTGCGT Dhaf_0039 37311 - 37919 + | ABC transporter related TERM 62 37931 - 37957 + T 100 -13.8 -3.86822 | opp_overlap 37931 GTAATCTTTGGACAA GAGGATGGCC TGAAATT GGCCATCCTC TTTATGCCGCACTTA TERM 63 37957 - 37931 - T 100 -13.8 -3.30159 | opp_overlap 37931 GTAATCTTTGGACAA GAGGATGGCC TGAAATT GGCCATCCTC TTTATGCCGCACTTA Dhaf_0040 39280 - 37970 - | histidine kinase Dhaf_0041 39968 - 39273 - | two component transcriptional regulator, winged helix family TERM 64 39558 - 39587 + g 85 -11.6 -3.72073 | gap 1, overlap 39554 GATATAGAGATCCCC GAGCCTGACTTCT TTTTT AGAAG-CAGGCTC TTGCTTTTGGTAGAT Dhaf_0042 40149 - 41147 + | periplasmic solute binding protein TERM 65 41208 - 41229 + GF 81 -9.5 -3.80279 | opp_overlap 41208 CAGTTATGGAAATGA GCCGGTTTT TTCA AAAATCGGC TTCTCTGTTTATAAG Dhaf_0043 41158 - 41901 + | ABC transporter related Dhaf_0044 41873 - 42706 + | ABC-3 protein TERM 66 42919 - 42903 - g 71 -4.3 -4.70659 | overlap 42883 42906 42907 TCCGAGATCGAAAAA GAAGGGG AAT CCCCCTG GCTGTCCACTATTTA TERM 67 42916 - 42906 - g 80 -8.2 -4.46215 | overlap 42903 42907 GAGATCGAAAAAGAA GGGG AAT CCCC CTGGCTGTCCACTAT Dhaf_0045 42774 - 43187 + | ferric uptake regulator, Fur family Dhaf_0046 43274 - 44311 + | cobalamin synthesis protein P47K TERM 68 44584 - 44599 + G 90 -9 -4.58395 | AGATTTGGATTGAGT GGAACG GTGT CGTTCC TTTTTCAGAGCTGCA Dhaf_0047 44316 - 45890 + | permease Dhaf_0048 45892 - 46755 + | Protein of unknown function DUF1980 Dhaf_0049 46803 - 47033 + | hypothetical protein TERM 69 47228 - 47260 + F 90 -4.2 -5.64321 | gap 1, overlap 47224 ATAAAATGCAATTCA GCCAA-GTTGGATCC GTTC GCATTCGACTTTGGC TTTTTATTTTGTTAT TERM 70 47572 - 47588 + F 100 -8.7 -5.45726 | opp_overlap 47572 TATTTATCATATAAA GGTGGTC TAA GACCATC TTTTTTTCCACTATC TERM 71 48863 - 48852 - g 71 -7.2 -4.10552 | CGCCAGGAAAGCAAA GGGG AACT CCCC AAAAAGGTCAATGAG Dhaf_0050 47673 - 49337 + | DNA polymerase III, subunits gamma and tau Dhaf_0051 49360 - 49692 + | hypothetical protein Dhaf_0052 49703 - 50299 + | recombination protein RecR Dhaf_0053 50389 - 50643 + | sigmaK-factor processing regulatory BofA TERM 72 50942 - 50986 + F 75 -5.1 -4.77719 | opp_overlap 50953 50957, overlap 50960 ACATAAGCAAGGTTT GGGTGGAAAAAGAACTTCCTT AAA AAAGAATCTCTTTTTTAACCC TTTTATTAAATTTTC Dhaf_0054 51021 - 54551 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 73 54597 - 54574 - f 93 -12.4 -3.16564 | opp_overlap 54576, overlap 54576 CCTGGATTGCAGTAA GAGAGCGGGC TTTG GCCCGCTCTT TTTGCACGGTCATAA TERM 74 54595 - 54576 - f 100 -15 -3.14602 | opp_overlap 54576, overlap 54574 TGGATTGCAGTAAGA GAGCGGGC TTTG GCCCGCTC TTTTTGCACGGTCAT TERM 75 54576 - 54595 + F 100 -15 -4.58663 | opp_overlap 54576 54574 TGGATTGCAGTAAGA GAGCGGGC TTTG GCCCGCTC TTTTTGCACGGTCAT TERM 76 55965 - 55935 - g 79 -3.2 -5.29846 | opp_overlap 55937, overlap 55937 AAGTTTAAAGAAAAA TACGGTGACAAAGT AAA ACTTCGTGTCCGTT TCTCCCTGAATAATT Dhaf_0055 54726 - 56078 + | ATPase TERM 77 56507 - 56522 + G 71 -9 -3.53444 | opp_overlap 56509, overlap 56521 GTGGCAGGGGGAGAG GATCCC GGCG GGGATC TTTGCAGCCAGCTGA Dhaf_0056 56150 - 56626 + | hypothetical protein TERM 78 56660 - 56700 + F 100 -12.8 -4.55118 | opp_overlap 56658 TTAAATCAAAATTGG GGAGATAGAATCTTATCT ATTTA GGAAAGGATTCTATCTCC TTTTCTATAGGCTTA TERM 79 56821 - 56835 + F 74 -4.3 -5.03715 | TAAGGAGGGGGTGGT CGTTT TGGCT AAACG TTTTTTCACCATGAT Dhaf_0057 56825 - 58396 + | GerA spore germination protein TERM 80 58416 - 58394 - f 71 -2 -5.14563 | overlap 58397 TCGGGGAGGAAAAAA TAAGTGGA ACGTATA TCCACCCA TCAGTTCACAATATT TERM 81 58813 - 58829 + G 75 -5.1 -4.69622 | GATCGAAGTGTTAAG CCGCTTT TCA GAAGTGG TTTTTCCCATTATCT TERM 82 58875 - 58901 + G 100 -10.8 -4.66953 | TTATAGCGTTATTCA GCATTCCCCGTT TTG AGCGGGGAGAGC TTTTTCCCATGTTGG Dhaf_0058 58397 - 59509 + | spore germination protein TERM 83 60062 - 60104 + G 71 -10.5 -2.9178 | opp_overlap 60061 60060, overlap 60061 GAGAAAGCCAGAATC CCATCATCCCCAGGGTGGA GAAGG TCCAACCAGGGGAACATGG CTTATTCTACTCTGA TERM 84 60566 - 60552 - g 77 -4.2 -5.01042 | overlap 60554 AATCGAAATTAAAAA CCCCAA GTA TTGGCG GGAAATACAAGAGAA Dhaf_0059 59521 - 60717 + | germination protein, Ger(x)C family TERM 85 60980 - 61003 + G 77 -6.8 -4.57755 | gap 1, overlap 60950 CAGGCCCGGGCTGCC GCTGTGTATCA AAG TGATGC-CAGC TTTTATCTGATCAAT TERM 86 61928 - 61946 + G 73 -7.4 -4.15106 | opp_overlap 61919, overlap 61929 61931 AACAAAGATGTCGTG GCATCTCC CGA GGAGATGG TTTTCGAGATTCCTC TERM 87 61929 - 61945 + G 74 -10.9 -3.08581 | opp_overlap 61919, overlap 61928 61931 ACAAAGATGTCGTGG CATCTCC CGA GGAGATG GTTTTCGAGATTCCT Dhaf_0060 60785 - 62203 + | Orn/Lys/Arg decarboxylase major region Dhaf_0061 62205 - 63053 + | DNA-directed DNA polymerase TERM 88 63563 - 63573 + G 77 -6.8 -4.61527 | GTGGCAGAGTGCTGT GCTG CTC CAGC TTTTTAGGAGATTTT Dhaf_0062 63067 - 63915 + | PSP1 domain protein TERM 89 64169 - 64205 + G 78 -5.8 -4.66163 | TCTTCATTTTGGACA GCCTTTAGAGGAGGGG GATTG CCTCTTCTGTATGGGC TTTTTGCGTAAAGAT Dhaf_0063 63912 - 64223 + | protein of unknown function DUF972 Dhaf_0064 64244 - 65089 + | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase TERM 90 65165 - 65149 - T 82 -8 -4.55887 | opp_overlap 65149 65147 65163 GCCTAAAAAGAGAAA GAAGGC TTTAC GCCTTC TATTATGTAGAATTA Dhaf_0065 65491 - 65222 - | transcriptional regulator, AbrB family TERM 91 65945 - 65927 - H 71 -6.6 -4.11484 | opp_overlap 65920 65919 65930 GGTAAGGCCGGAAAA GCGGCTCG GAT CAAGCTGC TTCCCGATATTTCCC Dhaf_0066 66076 - 66294 + | hypothetical protein Dhaf_0067 66426 - 68369 + | methionyl-tRNA synthetase Dhaf_0068 68366 - 69127 + | hydrolase, TatD family TERM 92 69160 - 69147 - f 70 -9.5 -2.78901 | opp_overlap 69146, overlap 69146 AAAGCAAAGCATAAG CCGGC ATAG GCCGG ATATCATGGCACAAA TERM 93 69169 - 69204 + F 100 -17 -4.7908 | opp_overlap 69167 AGGCCGGATATCATG GCACAAATCCTGGGGG AATG TCTCCGGGATTTGTGC TTTCTTTATGTTTTT Dhaf_0069 69345 - 70193 + | 3D domain protein Dhaf_0070 70287 - 71456 + | 3D domain protein TERM 94 71560 - 71592 + F 100 -10.7 -5.03994 | opp_overlap 71560 TAAGCAATCAAACCA TGAGGTTCTTCGA AATAAAG TCGAAGGGCCTCA TTTTTCTATATCCAG Dhaf_0071 71668 - 72384 + | N-acetylmuramoyl-L-alanine amidase Dhaf_0072 72606 - 73760 + | glycoside hydrolase family 18 TERM 95 73827 - 73790 - f 74 -9.9 -3.23555 | opp_overlap 73792, overlap 73788 73786 73784 73791 CTGAAAGAAGACACA CGGTAAGGAGCAGGAGA AATC TCTTCTGCTCCTTACTT TTTTGCAGTGTGCTT TERM 96 73826 - 73791 - f 91 -13.4 -2.5341 | opp_overlap 73792, overlap 73790 73788 73786 73784 TGAAAGAAGACACAC GGTAAGGAGCAGGAGA AATC TCTTCTGCTCCTTACT TTTTTGCAGTGTGCT TERM 97 73792 - 73825 + F 100 -19.1 -5.07567 | opp_overlap 73791 73790 73788 73786 73784 GAAAGAAGACACACG GTAAGGAGCAGGAGA AATC TCTTCTGCTCCTTAC TTTTTTGCAGTGTGC TERM 98 73944 - 73963 + GF 71 -8.6 -3.56643 | gap 1, opp_overlap 73944 73943 73940 GAAGGTAAAAATGAT GCTCATGCG GTG CGCA-GAGC TTTAGGAAATGTGGA Dhaf_0073 73896 - 74513 + | primase/topoisomerase like protein Dhaf_0074 74476 - 75312 + | dimethyladenosine transferase Dhaf_0075 75428 - 75775 + | hypothetical protein Dhaf_0076 75850 - 76251 + | hypothetical protein TERM 99 76267 - 76292 + T 82 -8.4 -4.26871 | gap 1, opp_overlap 76267 TATGTTATACAAAAA GCAGCAAA-CC GCTAA GGATTTGCTGC TTTATTACTAAGTTC TERM 100 76292 - 76267 - T 100 -9.8 -4.9792 | opp_overlap 76267 TATGTTATACAAAAA GCAGCAAACC GCTAAG GATTTGCTGC TTTATTACTAAGTTC Dhaf_0077 77904 - 76333 - | methylenetetrahydrofolate reductase TERM 101 77539 - 77526 - G 75 -5.2 -4.67904 | opp_overlap 77525, overlap 77517 GATCAAGGTCAAAAA CCGG TTTGGG CCGG CCTTTAAAGCCGGAG TERM 102 79211 - 79196 - g 75 -6 -4.59853 | GGAAGTGGTCAAAAA GGTGGC CTAC GCCTCC GAGCAAGTATCTCTG Dhaf_0078 78345 - 80111 + | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 103 80140 - 80178 + F 100 -25 -3.55444 | opp_overlap 80140 80149, overlap 80149 TAAAGTCCTAGGAAA TAGTATAAAGGTCACAGC TAA GCTGTGACCTTTATACTA TTTAGAAAATAAAAA TERM 104 80178 - 80140 - f 100 -25 -3.75461 | opp_overlap 80140 80149, overlap 80149 TAAAGTCCTAGGAAA TAGTATAAAGGTCACAGC TAA GCTGTGACCTTTATACTA TTTAGAAAATAAAAA TERM 105 80149 - 80169 + F 100 -15.5 -4.1043 | opp_overlap 80140 80149, overlap 80140 AGGAAATAGTATAAA GGTCACAGC TAA GCTGTGACC TTTATACTATTTAGA TERM 106 80169 - 80149 - f 100 -15.5 -4.11033 | opp_overlap 80149 80140, overlap 80140 AGGAAATAGTATAAA GGTCACAGC TAA GCTGTGACC TTTATACTATTTAGA TERM 107 80576 - 80554 - g 76 -8.5 -4.10179 | gap 1 GACAAGGTATATAAA GAGCAGCAGG CAGG CCTGCT-CTC AGAGGAGGAGGCTAA Dhaf_0079 80344 - 82110 + | methyl-accepting chemotaxis sensory transducer with Cache sensor Dhaf_0080 82813 - 82100 - | protein of unknown function DUF1624 TERM 108 82184 - 82216 + g 85 -10.6 -4.07678 | gap 1, opp_overlap 82183 AATCCATAAGGAATG GCGGCTGAC-CCATG TAAC CATGGGGTAGGCCGC TTTGCTCTTTTCCGC Dhaf_0081 83756 - 82899 - | glycosyl transferase family 2 Dhaf_0082 83903 - 84736 + | sporulation peptidase YabG TERM 109 84740 - 84778 + T 100 -15.5 -4.57569 | gap 1, opp_overlap 84764, overlap 84743 AGTCCTTATTGATGA TG-ATGAGCGCCTGCG CAGATGAA CGCAGGCGCTCATGCA TTTTTAGCAGCCTAC TERM 110 84743 - 84774 + T 100 -17.4 -2.83903 | opp_overlap 84764, overlap 84740 CCTTATTGATGATGA TGAGCGCCTGCG CAGATGAA CGCAGGCGCTCA TGCATTTTTAGCAGC Dhaf_0083 85137 - 84790 - | ErfK/YbiS/YcfS/YnhG family protein TERM 111 85766 - 85734 - g 73 -2.5 -5.03314 | opp_overlap 85738 85742, overlap 85736 85738 GGCACGCCCAAAAAA GACACCCTGACCATG GCC CCCGGTCTGGGTCTG CTTCATTCTGTTGTC TERM 112 85820 - 85804 - g 71 -9.3 -3.5393 | AGCATTTTGCCCAAA GGGGCCG CAT CGGCCGC CTGCTCACGGCTATC Dhaf_0084 85278 - 86099 + | cyanophycinase TERM 113 86387 - 86410 + G 70 -8.1 -3.86822 | CTTTACGAGCATTTT TGCTCCCGG GGCAAA CCGGGAGGA TTTGTAGAACGGTTG TERM 114 87161 - 87147 - g 80 -7 -4.65895 | overlap 87148 TGGTTGACGGAAAAA TGGCGG CGG CCGCCG AGCGCATTCCAGCTC TERM 115 87160 - 87148 - g 75 -10.5 -3.39216 | overlap 87147 GGTTGACGGAAAAAT GGCGG CGG CCGCC GAGCGCATTCCAGCT TERM 116 87355 - 87319 - g 83 -4.1 -5.47218 | opp_overlap 87319 87321 87343, overlap 87322 CCTGACCCAAAAAAA GATCGCCCTGGAGACGG TAC CCGCCGACGGGGAGGTC GTTTATCTGCGGGAC Dhaf_0085 86219 - 88876 + | cyanophycin synthetase TERM 117 89769 - 89746 - g 82 -5.2 -5.16681 | opp_overlap 89746 GCAAAAAGAAGAAAA GCGCCATCCC CTAG AGAATGCCGC TGTATTTCATTTAAA TERM 118 89791 - 89802 + G 78 -5.8 -4.73613 | TCATTTAAAGTTTGA GGGT ATTC ACCC TTTTATTGATGGTAA Dhaf_0086 89105 - 90019 + | filamentation induced by cAMP protein Fic TERM 119 90039 - 90073 + F 82 -8.5 -4.25053 | opp_overlap 90041, overlap 90037 90041 TACGATGACATTCCA AACGGCCACTAGGGG CATCT CCCTCAGTGGCTGTC TTATTTATGTTATGG TERM 120 90071 - 90041 - f 75 -8.9 -3.64599 | opp_overlap 90039 90037 90041 CGATGACATTCCAAA CGGCCACTAGGGG CATCT CCCTCAGTGGCTG TCTTATTTATGTTAT TERM 121 90041 - 90071 + F 84 -11.1 -3.70926 | opp_overlap 90041, overlap 90039 90037 CGATGACATTCCAAA CGGCCACTAGGGG CATCT CCCTCAGTGGCTG TCTTATTTATGTTAT TERM 122 90418 - 90437 + G 77 -4.3 -5.00884 | gap 1 GGCCCGGAGAATTTG GCTTACCG GGCGG CGG-AAGC TTTTTTAAGCGGACT Dhaf_0087 90220 - 91092 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Dhaf_0088 91085 - 91804 + | transcriptional regulator, GntR family Dhaf_0089 91816 - 92652 + | purine operon repressor, PurR TERM 123 92816 - 92789 - f 91 -13 -2.85021 | overlap 92792 AAAGAACGGAGCATA TAAGCGAAAAAA AGAA TTTTTTCGCTTA AAAGAAGGAGTTTTT TERM 124 92813 - 92792 - f 80 -10.3 -3.56161 | overlap 92789 GAACGGAGCATATAA GCGAAAAAA AGAA TTTTTTCGC TTAAAAGAAGGAGTT Dhaf_0090 92900 - 93154 + | SpoVG family protein TERM 125 93193 - 93160 - f 100 -13.3 -3.72087 | gap 1, opp_overlap 93167, overlap 93167 AGCAATGTAAGACAA GCATTAAGAGACCCTG TTC CAGGGTCTCTTT-TGC TCATGAGATAGATAG TERM 126 93167 - 93187 + F 100 -15.5 -4.30844 | opp_overlap 93160 93167 TAAGACAAGCATTAA GAGACCCTG TTC CAGGGTCTC TTTTGCTCATGAGAT TERM 127 93187 - 93167 - f 100 -15.5 -3.33003 | opp_overlap 93167, overlap 93160 TAAGACAAGCATTAA GAGACCCTG TTC CAGGGTCTC TTTTGCTCATGAGAT TERM 128 94472 - 94491 + G 72 -10.8 -2.64747 | opp_overlap 94470 94468, overlap 94471 ATCTGTGAATATAGG TGCAGGTA CCAT TACCTGCA ATTATGATGGGGTCA TERM 129 94534 - 94522 - g 71 -4.9 -4.50487 | ATAAATATAAAACAA TTATC AGG GATAA GGCTTTTCTGGGAAG Dhaf_0091 93342 - 94703 + | UDP-N-acetylglucosamine pyrophosphorylase Dhaf_0092 94718 - 95659 + | ribose-phosphate pyrophosphokinase TERM 130 95735 - 95767 + T 100 -12.1 -5.10497 | opp_overlap 95735 TTTTAGACAAAAAAA TCAGAAGTGAGGGAT GAG GTCCCTTCCTTCTGA TTTTTTGCGTGGATT TERM 131 95767 - 95735 - T 100 -9.2 -5.71712 | opp_overlap 95735 TTTTAGACAAAAAAA TCAGAAGTGAGGGA TGAGG TCCCTTCCTTCTGA TTTTTTGCGTGGATT Dhaf_0093 97681 - 95822 - | heavy metal translocating P-type ATPase TERM 132 97664 - 97630 - G 73 -7.3 -4.20025 | opp_overlap 97621 97630, overlap 97633 AAGCGGGAAGAGAAA GAACGAGAAAAAGAA TCGTT CTCTTCTCCTCATTC TTGAAAAATGTTAGC Dhaf_0094 97887 - 98099 + | transcriptional regulator, XRE family TERM 133 98107 - 98097 - g 75 -5.4 -4.78107 | GAGTACGATGAAAAA TGAC AGC GTCA AAAAATATATGGGGT Dhaf_0095 98089 - 98526 + | hypothetical protein TERM 134 99037 - 99011 - g 74 -3.1 -5.04249 | opp_overlap 99014, overlap 99014 GGCTGAAAAAAGAAA CAC-CCTGTACCA AAC TGA-ACAGGTGTG TGGATTGCCGGCATC Dhaf_0096 98530 - 99147 + | protein of unknown function DUF1121 Dhaf_0097 99529 - 99726 + | hypothetical protein TERM 135 100463 - 100453 - g 71 -8.2 -3.62518 | opp_overlap 100460 TTAAATACCCTGAAA GCGG AAG CCGC CGAGCGGTTTAAGGA Dhaf_0098 99733 - 100689 + | Geranylgeranyl pyrophosphate synthase-like protein Dhaf_0099 100670 - 103027 + | histidine kinase TERM 136 103343 - 103330 - g 75 -5.2 -4.74285 | ATGGATAAGATAAAA GCGG CCCACC CCGC CCTAAAGGTTATTCT Dhaf_0100 103081 - 103767 + | two component transcriptional regulator, LuxR family TERM 137 103795 - 103825 + T 87 -4.6 -5.48825 | opp_overlap 103795 103790 AAAATAATAGGAAAA TCCCTCTGCGGTAA AAG TGAAAGCAGGGGGA TTTTTTTAGATGGTA Dhaf_0101 104166 - 103891 - | protein of unknown function DUF156 TERM 138 104180 - 104199 + H 78 -9.4 -3.68761 | overlap 104192 ATAATAGCGCCTCCT TTATACCC GTAG GGGTATAA TTATAATTTTACCCT TERM 139 104923 - 104933 + G 77 -4.6 -5.00616 | CAGGAGCTTTTTATG GCTC TGA GGGC TTTTTTGGAACACGG Dhaf_0102 104455 - 105465 + | hypothetical protein Dhaf_0103 105627 - 106814 + | SMC domain protein TERM 140 106958 - 106980 + G 83 -9.2 -4.42156 | GTTGTTGCGTGCGGT TCACGAAATG AGG CTTTTCGTGA TTATTGTTTTTCTTT Dhaf_0104 106808 - 107437 + | hypothetical protein TERM 141 107487 - 107529 + F 85 -7.3 -4.82667 | gap 1, opp_overlap 107495, overlap 107495 AAATGAAGATAGAGA TAATAAAAGTGCGTTTCC GTAGCTCA GGAAACGCAC-TTTATCA TTTTTGGTATGGTGA TERM 142 107522 - 107495 - f 100 -11.4 -4.88495 | opp_overlap 107487 107495 ATAGAGATAATAAAA GTGCGTTTCC GTAGCTCA GGAAACGCAC TTTATCATTTTTGGT TERM 143 107495 - 107522 + F 100 -11.4 -4.27774 | opp_overlap 107495, overlap 107487 ATAGAGATAATAAAA GTGCGTTTCC GTAGCTCA GGAAACGCAC TTTATCATTTTTGGT TERM 144 107816 - 107836 + G 75 -6.1 -4.60924 | opp_overlap 107821, overlap 107819 ATGGCCCTTGATGGT AAGGATCGG GAG CCGATCTTC TTTTTGCAGCATTTG TERM 145 107819 - 107833 + G 85 -10 -4.40963 | opp_overlap 107821, overlap 107816 GCCCTTGATGGTAAG GATCGG GAG CCGATC TTCTTTTTGCAGCAT TERM 146 107968 - 107987 + G 73 -7.2 -4.22883 | gap 1, overlap 107982 107986 GTTGCTGAAGGCGAT TGG-CAGCA GCG TGCTGACCA TTATTTTCGATGATG TERM 147 109461 - 109442 - g 73 -7.8 -4.10161 | TATTACCTGGGAAAA GCCGCTGA TTTT TCAGCCGC CGACCGCTATCTGAA Dhaf_0105 107633 - 110542 + | transcriptional regulator domain protein TERM 148 110556 - 110585 + F 100 -10.1 -4.96848 | opp_overlap 110559 110565, overlap 110557 AGAAGTGTGACCCGA AGAGGAAGACCAA AGAT TTGGTTTTCCTCC TTTTTATGTCCCAGC TERM 149 110557 - 110584 + F 100 -13.6 -3.57627 | opp_overlap 110559 110565, overlap 110556 GAAGTGTGACCCGAA GAGGAAGACCAA AGAT TTGGTTTTCCTC CTTTTTATGTCCCAG TERM 150 110776 - 110764 - g 73 -7.7 -4.08767 | opp_overlap 110764 TGGACTTGCTCAAAA GGATG AGA CATCC TTTACGGAACTATAC Dhaf_0106 110681 - 111283 + | RNA polymerase, sigma-24 subunit, ECF subfamily Dhaf_0107 111276 - 111650 + | hypothetical protein Dhaf_0108 111770 - 112012 + | protein of unknown function nitrogen fixation TERM 151 112039 - 112065 + T 100 -16 -3.90358 | opp_overlap 112039, overlap 112044 TACCCAATTTAAAAA GGAAAGTCGTTC TCT GGACGACTTTCC TTTCATGTATGATGT TERM 152 112065 - 112039 - T 100 -13.8 -4.75174 | opp_overlap 112039 112044 TACCCAATTTAAAAA GGAAAGTCGTTC TCT GGACGACTTTCC TTTCATGTATGATGT TERM 153 112044 - 112060 + T 83 -8.7 -4.13341 | opp_overlap 112039, overlap 112039 AATTTAAAAAGGAAA GTCGTTC TCT GGACGAC TTTCCTTTCATGTAT Dhaf_0109 113478 - 112081 - | Radical SAM domain protein TERM 154 112578 - 112590 + g 71 -9.1 -3.49482 | overlap 112579 TGCTCCGCAGATGGT GCAGC CAG GCTGC TGTTTCCTGCTCTAA TERM 155 113289 - 113312 + g 80 -3.8 -5.20216 | opp_overlap 113295, overlap 113291 TGTCCTGGCATTCGC TAATCAGGTC CCAC GACCTGAGGA TTTTTTCCTGATCTG TERM 156 114283 - 114271 - g 70 -7.7 -3.81146 | opp_overlap 114271 114270 GTGCCCAAGGAATAA CGATC GTC GATCG CTTTAACTACTATGG Dhaf_0110 113685 - 114827 + | Extracellular ligand-binding receptor TERM 157 115213 - 115237 + G 78 -12.1 -2.62184 | opp_overlap 115211, overlap 115218 CCATGGATAAGGATG GTCAAGGCGGG GAG CCGGCCTTGGC TGGTATCGAAGAACA Dhaf_0111 114843 - 115781 + | hypothetical protein TERM 158 116941 - 116958 + G 71 -2.7 -4.91459 | gap 1 AATGCTGAACAGGAG CTG-GGAG TTT CTTCACAG TTTTTATCCGTATTC Dhaf_0112 115807 - 117990 + | ABC transporter related Dhaf_0113 118028 - 120787 + | ABC transporter related TERM 159 120824 - 120861 + F 100 -17.3 -3.54653 | opp_overlap 120829, overlap 120829 AACTGCAATTATTAT CAAAAGAAGTTGGTTGC TCTT GCAATCGACTTCTTTTG TTCTATGATAAAGGT TERM 160 120856 - 120829 - f 74 -7 -4.33105 | opp_overlap 120829 120824 CAATTATTATCAAAA GAAGTTGGTTGC TCTT GCAATCGACTTC TTTTGTTCTATGATA TERM 161 120829 - 120856 + F 100 -11.4 -4.85918 | opp_overlap 120829, overlap 120824 CAATTATTATCAAAA GAAGTTGGTTGC TCTT GCAATCGACTTC TTTTGTTCTATGATA Dhaf_0114 120953 - 121942 + | transcriptional regulator, MerR family TERM 162 122248 - 122237 - g 71 -4.4 -4.71426 | GGTTGATGAAGAAAA GGAA GCGA TTCC CCGGCTTCACTCCGA TERM 163 122446 - 122424 - g 70 -7.6 -3.96148 | opp_overlap 122417 GTGGTCGAGGACAAA GCTGTCCTTG GTG CATGGGCAGC AGGCAATTCGAACGC Dhaf_0115 121953 - 122777 + | nitroreductase TERM 164 122783 - 122817 + T 100 -20.1 -3.03771 | opp_overlap 122788, overlap 122788 ACGTTGGTAGGCTTT ACGAAGCTGCCGGCA AAATC TGCCGGCAGCTTCGC TGTTCAAGCCTGTAA TERM 165 122788 - 122812 + T 100 -17.2 -3.1855 | opp_overlap 122788, overlap 122783 GGTAGGCTTTACGAA GCTGCCGGCA AAATC TGCCGGCAGC TTCGCTGTTCAAGCC TERM 166 122812 - 122788 - T 100 -17.9 -3.14931 | opp_overlap 122788 122783 GGTAGGCTTTACGAA GCTGCCGGCAA AAT CTGCCGGCAGC TTCGCTGTTCAAGCC Dhaf_0116 123078 - 122851 - | protein of unknown function DUF1659 Dhaf_0117 124000 - 123161 - | hypothetical protein TERM 167 124070 - 124123 + r 100 -15.5 -3.29324 | gap 1, opp_overlap 124071, overlap 124073 GAGATGGTGAAGACA ACACTCCCCTG-CCTGTTAGCGTGTT TTG AGTACACTAATAGGGCAGGGGAGTGG TTAAATTTAAATACA TERM 168 124122 - 124071 - R 100 -14.7 -3.67052 | gap 1, opp_overlap 124070 124073 AGATGGTGAAGACAA CACTCCCCTGC-CTGTTAGCGT GTTTTGAGT ACACTAATAGGGCAGGGGAGTG GTTAAATTTAAATAC TERM 169 124073 - 124120 + r 100 -15.8 -2.82156 | gap 1, opp_overlap 124071, overlap 124070 ATGGTGAAGACAACA CTCCCCTG-CCTGTTAGCGTGTT TTG AGTACACTAATAGGGCAGGGGAG TGGTTAAATTTAAAT Dhaf_0118 125114 - 124209 - | PRC-barrel domain protein TERM 170 125262 - 125278 + G 73 -7.9 -3.99592 | opp_overlap 125252 125255 125254 125273, overlap 125263 125273 GACAATATGCGGAGA CCCGGCA TAA TGCCGGA TTTCTCCTGCTGGAT TERM 171 125263 - 125277 + G 78 -11.4 -2.99273 | opp_overlap 125252 125255 125254 125273, overlap 125262 125273 ACAATATGCGGAGAC CCGGCA TAA TGCCGG ATTTCTCCTGCTGGA Dhaf_0119 125213 - 125770 + | Aminoacyl-tRNA hydrolase Dhaf_0120 125833 - 126408 + | protein of unknown function DUF820 TERM 172 126478 - 126430 - f 100 -17.7 -3.31144 | opp_overlap 126430 126436, overlap 126431 126436 TCTGTATTTTTACAA GTAAAAGCTCGTGTCAGGGAACT TGC AGTTCTTTGACACGAGCTTTTAA TATTAGGAATCTTCC TERM 173 126430 - 126478 + F 100 -22.1 -3.06315 | opp_overlap 126430 126431 126436, overlap 126436 TCTGTATTTTTACAA GTAAAAGCTCGTGTCAGGGAACT TGC AGTTCTTTGACACGAGCTTTTAA TATTAGGAATCTTCC TERM 174 126477 - 126431 - f 100 -21.2 -2.58544 | opp_overlap 126430 126436, overlap 126430 126436 CTGTATTTTTACAAG TAAAAGCTCGTGTCAGGGAACT TGC AGTTCTTTGACACGAGCTTTTA ATATTAGGAATCTTC TERM 175 126436 - 126472 + F 100 -21.1 -4.4261 | opp_overlap 126436 126431 126430, overlap 126430 TTTTTACAAGTAAAA GCTCGTGTCAGGGAACT TGC AGTTCTTTGACACGAGC TTTTAATATTAGGAA TERM 176 126472 - 126436 - f 100 -16.7 -4.48987 | opp_overlap 126430 126436, overlap 126431 126430 TTTTTACAAGTAAAA GCTCGTGTCAGGGAACT TGC AGTTCTTTGACACGAGC TTTTAATATTAGGAA Dhaf_0121 126639 - 127649 + | ABC-type phosphate transport system periplasmic component-like protein Dhaf_0122 127716 - 127943 + | prevent-host-death family protein Dhaf_0123 127927 - 128352 + | PilT protein domain protein TERM 177 128431 - 128390 - T 74 -4.3 -5.02476 | opp_overlap 128394, overlap 128392 128393 ATAGCCTGTAAAAAA GAGGGCCTCGCCGACTGTT TTTG AATACTCGGCGAGGCTTTT GATTAAGCGAAGCTG TERM 178 128429 - 128392 - T 71 -6.9 -4.13963 | opp_overlap 128394, overlap 128390 128393 AGCCTGTAAAAAAGA GGGCCTCGCCGACTGTT TTTG AATACTCGGCGAGGCTT TTGATTAAGCGAAGC TERM 179 128428 - 128393 - T 77 -10.4 -3.07655 | opp_overlap 128394, overlap 128392 128390 GCCTGTAAAAAAGAG GGCCTCGCCGACTGTT TTTG AATACTCGGCGAGGCT TTTGATTAAGCGAAG TERM 180 128394 - 128427 + T 100 -16.1 -4.4078 | opp_overlap 128393 128392 128390 CCTGTAAAAAAGAGG GCCTCGCCGACTGTT TTTG AATACTCGGCGAGGC TTTTGATTAAGCGAA Dhaf_0124 129677 - 128451 - | putative GTP-binding protein TERM 181 131043 - 131059 + G 70 -2.1 -4.85599 | overlap 131041 131046 GCAGCAGTCTGTGTT GACCGGC GAG GCCAATC TTTTTATGGGCTCGG Dhaf_0125 130048 - 131349 + | putative ATPase TERM 182 131412 - 131366 - T 100 -14 -3.17194 | gap 1, opp_overlap 131371 131373, overlap 131371 ATGGTCTGAAGTGAA GAAAAGCGCCCTTATCTC-CC GTGTAT GGTGAGATAAGGGCACTTTTT TAGGGGGGGTCTTTC TERM 183 131371 - 131407 + T 100 -12.4 -5.00884 | gap 1, opp_overlap 131366 131371, overlap 131373 CTGAAGTGAAGAAAA GCGCCCTTATCTC-CCG TGTA TGGTGAGATAAGGGCAC TTTTTTAGGGGGGGT TERM 184 131407 - 131371 - T 100 -13.9 -4.72029 | gap 1, opp_overlap 131371 131373, overlap 131366 CTGAAGTGAAGAAAA GCGCCCTTATCTC-CC GTGTAT GGTGAGATAAGGGCAC TTTTTTAGGGGGGGT TERM 185 131373 - 131405 + T 93 -13.6 -2.75708 | gap 1, opp_overlap 131371 131366, overlap 131371 GAAGTGAAGAAAAGC GCCCTTATCTC-CCG TGTA TGGTGAGATAAGGGC ACTTTTTTAGGGGGG Dhaf_0126 132116 - 131439 - | cytoplasmic chaperone TorD family protein TERM 186 132080 - 132096 + g 71 -6.6 -4.28994 | opp_overlap 132076 AGTACATAAATTGGC GGATCT CCAGC AGATCC TTTTGCTCAGTAGTG TERM 187 133459 - 133474 + G 76 -7.5 -4.46212 | opp_overlap 133442 TTGCCCGGGACATTG CCGGG ACCAAG CCCGG TTTTATCCTGCAAGG TERM 188 133768 - 133746 - g 76 -2 -5.18371 | overlap 133747 133748 GCGGACAAAACAAAA TCGACCATCA AAA TGATCATCAA TTACGGCGGCAATAC Dhaf_0127 132342 - 134741 + | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family Dhaf_0128 134755 - 135327 + | dimethylsulfoxide reductase, chain B TERM 189 135655 - 135645 - g 73 -4.6 -4.79756 | opp_overlap 135650, overlap 135649 GAGAGAAGGGAAAAA GCAC CCG GCGC CCGCACCGCTTTAGG Dhaf_0129 135342 - 136160 + | cyclic nucleotide-binding protein TERM 190 136191 - 136223 + F 100 -12.8 -4.78107 | GCCATGAATAAGCCG GCACCTCTCAGG CAAACCTAT CCTGGGAGGTGC TTTTTCATGCTGGTA Dhaf_0130 136230 - 136406 + | hypothetical protein TERM 191 137728 - 137738 + G 74 -6.8 -4.36595 | opp_overlap 137716 AATTCCCGGGGTGGC TCCG AAA CGGA TTTTCAATTTAAATG TERM 192 137753 - 137770 + G 73 -8.3 -3.85698 | opp_overlap 137753 137752 ATTTTCAATTTAAAT GCCCGGC CTTT GACGGGC TTTATGGGGAAAACC Dhaf_0131 136541 - 140134 + | transcription-repair coupling factor Dhaf_0132 140173 - 141120 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 193 141227 - 141177 - f 93 -10.8 -4.11484 | opp_overlap 141185, overlap 141185 GTGAATGCTTGAAAA TCAATGAAGATATACTTAGAAAGA GAT TCTTTTTAAGTATATCTTTTTCGA TCCCTAAACTTTCCT TERM 194 141219 - 141185 - f 100 -13.2 -3.54177 | opp_overlap 141185, overlap 141177 TTGAAAATCAATGAA GATATACTTAGAAAGA GAT TCTTTTTAAGTATATC TTTTTCGATCCCTAA TERM 195 141185 - 141219 + F 100 -15.4 -4.67353 | opp_overlap 141185 141177 TTGAAAATCAATGAA GATATACTTAGAAAGA GAT TCTTTTTAAGTATATC TTTTTCGATCCCTAA Dhaf_0133 141445 - 141987 + | transcriptional regulator, AbrB family TERM 196 142026 - 142003 - f 79 -11 -3.00704 | opp_overlap 142003, overlap 141998 ATCCTTTAAATGAGA TTGGAGCGGC GGCA GCCGCTTCAA TTTTTTATGAGCATC TERM 197 142003 - 142026 + F 100 -13.2 -5.252 | opp_overlap 142003 141998 ATCCTTTAAATGAGA TTGGAGCGGC GGCA GCCGCTTCAA TTTTTTATGAGCATC Dhaf_0134 142114 - 143595 + | MazG family protein TERM 198 143723 - 143734 + G 70 -2.2 -4.88407 | opp_overlap 143712, overlap 143716 AGGATGCTGAAAAAG CAGT CAAC GCTG TTTTTGCTTCAATCG Dhaf_0135 143653 - 143928 + | histone family protein DNA-binding protein TERM 199 143946 - 143965 + F 100 -10 -5.03994 | opp_overlap 143946 CTTTTGAGAAATAAA TCAGGTCC GTCA GGGCCTGA TTTTTCTCTATAGAC TERM 200 143965 - 143946 - f 82 -7.8 -4.55295 | opp_overlap 143946 CTTTTGAGAAATAAA TCAGGTCC GTCA GGGCCTGA TTTTTCTCTATAGAC Dhaf_0136 144016 - 144288 + | RNA-binding S4 domain protein TERM 201 146422 - 146398 - f 100 -13.7 -3.33492 | GCACGCAGCGGAGAA GGTTGGAAACA GGA CGTTTCCAACC CGCCATTGAGCAGGA TERM 202 146545 - 146526 - f 73 -5.6 -4.54727 | overlap 146527 CGGTGTAAATCAAAA TCCTGGAG ATCT CCCCAGGG CCCCCGCGCGCTCGA TERM 203 146544 - 146527 - f 71 -9.1 -3.32354 | overlap 146526 GGTGTAAATCAAAAT CCTGGAG ATCT CCCCAGG GCCCCCGCGCGCTCG TERM 204 146653 - 146609 - f 100 -18 -2.87683 | gap 1, opp_overlap 146609, overlap 146612 ATAGCCGGCCACAGA CAAGGCTCCTCTCCC-CCTCG CAAA CGAGGCGGAAGCAGAGCCTTG TTTCTTTATATTGTC TERM 205 146609 - 146653 + F 100 -13.6 -4.70921 | gap 1, opp_overlap 146609 146612 ATAGCCGGCCACAGA CAAGGCTCCTCT-CCCCCTCG CAAA CGAGGCGGAAGCAGAGCCTTG TTTCTTTATATTGTC TERM 206 146650 - 146612 - f 100 -13.9 -3.58726 | gap 1, opp_overlap 146609, overlap 146609 GCCGGCCACAGACAA GGCTCCTCTCCC-CCTCG CAAA CGAGGCGGAAGCAGAGCC TTGTTTCTTTATATT Dhaf_0138 146743 - 147012 + | sporulation protein YabP Dhaf_0139 147179 - 147577 + | hypothetical protein Dhaf_0140 147786 - 148025 + | RNA polymerase, sigma-24 subunit, ECF subfamily Dhaf_0141 148000 - 148320 + | Septum formation initiator Dhaf_0142 148443 - 148829 + | RNA binding S1 domain protein TERM 207 148872 - 148853 - f 76 -7.8 -4.1891 | opp_overlap 148854, overlap 148854 148856 GTTCTCTAAGATAAA TGACCGCT GCAA AGCGGTCT TTTTAGCACTCTCAG TERM 208 148871 - 148854 - f 84 -11.3 -3.11024 | opp_overlap 148854, overlap 148853 148856 TTCTCTAAGATAAAT GACCGCT GCAA AGCGGTC TTTTTAGCACTCTCA TERM 209 148854 - 148871 + F 100 -11.3 -4.61231 | opp_overlap 148854 148853 148856 TTCTCTAAGATAAAT GACCGCT GCAA AGCGGTC TTTTTAGCACTCTCA TERM 210 148914 - 148898 - f 85 -9.3 -4.17701 | opp_overlap 148898 CTCAGAAAGTATAAA GCTCGGC GAA GCCGGGC TTTCTTTATATCTTG TERM 211 148898 - 148914 + F 100 -11.5 -4.68132 | opp_overlap 148898 CTCAGAAAGTATAAA GCTCGGC GAA GCCGGGC TTTCTTTATATCTTG TERM 212 149163 - 149176 + G 79 -2.3 -5.52096 | AAATTGACTTTAGAG GGACA TTTT TGGCC TTTTTTATTAGGTTT TERM 213 149216 - 149228 + G 71 -9.1 -3.61371 | overlap 149201 149218 CCGCGGAAGTATTCT GGGGT TAT ACCCC TTTGGGATAGCCTTT TERM 214 150156 - 150144 - g 76 -9.1 -3.94846 | overlap 150138 GTAGGAAAATCCAAA CCGGA GAT TCCGG AGCTGATGAATGTTT Dhaf_0143 149100 - 151193 + | protein serine/threonine phosphatase TERM 215 151249 - 151233 - g 72 -5.8 -4.35327 | GTATGAAAAACTAAA GCAGCA GGTAT TGCCGC AGCTCATTGCGCCTG TERM 216 151465 - 151434 - g 80 -8.8 -4.42619 | opp_overlap 151437 151442, overlap 151437 GAAGATGGTACAAAA TATGGCAAGGGATT GGGA AATCCCTTGTCTTA TTCATCGTTTCGATT TERM 217 151462 - 151437 - g 71 -10.5 -2.88044 | opp_overlap 151437 151442, overlap 151434 GATGGTACAAAATAT GGCAAGGGATT GGGA AATCCCTTGTC TTATTCATCGTTTCG TERM 218 151437 - 151462 + G 93 -12.7 -3.79909 | opp_overlap 151437 151434, overlap 151442 GATGGTACAAAATAT GGCAAGGGATT GGGA AATCCCTTGTC TTATTCATCGTTTCG TERM 219 151442 - 151457 + G 70 -7.6 -3.85505 | opp_overlap 151437 151434, overlap 151437 TACAAAATATGGCAA GGGATT GGGA AATCCC TTGTCTTATTCATCG Dhaf_0144 151216 - 152634 + | tRNA(Ile)-lysidine synthetase TERM 220 154688 - 154642 - g 76 -11.7 -2.78505 | gap 2, overlap 154633 154637 TACAACGGAACATGA TGATCTTCTTCCCGCCACAGGGG AGA CCTCCGTGGAGGG-AGAAGA-CA GGACGGAAGCCGAGG Dhaf_0145 152777 - 154750 + | ATP-dependent metalloprotease FtsH Dhaf_0146 154762 - 155211 + | Nucleoside-diphosphate kinase TERM 221 155260 - 155225 - f 100 -17.8 -3.95893 | opp_overlap 155233, overlap 155233 AAAATAGAGAGTAAA TTGAAAAAGGGCACCG ACTT CGGTGTCCTTTTTCAA AAAATAATTCTTGAT TERM 222 155252 - 155233 - f 100 -9.2 -4.82855 | opp_overlap 155233, overlap 155225 GAGTAAATTGAAAAA GGGCACCG ACTT CGGTGTCC TTTTTCAAAAAATAA TERM 223 155233 - 155252 + F 100 -11.4 -4.57569 | opp_overlap 155233 155225 GAGTAAATTGAAAAA GGGCACCG ACTT CGGTGTCC TTTTTCAAAAAATAA TERM 224 155283 - 155265 - f 71 -3.2 -5.00616 | overlap 155269 TCCTTTTTCAAAAAA TAATTCTT GAT AAGAGTTA GAGGTGTATTAGCCA Dhaf_0147 155298 - 156008 + | protein of unknown function DUF881 TERM 225 156133 - 156121 - g 71 -10.5 -2.80345 | overlap 156118 156130 ACTGGAGAAAATTCA GGCCC AAA GGGCC GCTTCCGCCAGAGAT TERM 226 156194 - 156178 - g 74 -6.5 -4.32583 | TCAAGAGGAAAACAA GCTTCTC AAA GAGCAGC ACACAGCTTTAACAG Dhaf_0148 156008 - 156700 + | protein of unknown function DUF881 TERM 227 158387 - 158397 + G 71 -8.2 -3.66654 | AGAATGTTCTGGGCC GCCC ATC GGGC TTTACCATTACGGTC Dhaf_0149 156883 - 158553 + | Formate--tetrahydrofolate ligase TERM 228 158569 - 158599 + F 86 -9 -4.41047 | overlap 158572 AACAGGTCGTCTGGC TTTGCCCCAGAAAG AAA TTTTCTGGGGCTTA TTTTCGTTAGGACCT TERM 229 158572 - 158596 + F 100 -15.1 -4.32402 | overlap 158569 AGGTCGTCTGGCTTT GCCCCAGAAAG AAA TTTTCTGGGGC TTATTTTCGTTAGGA Dhaf_0150 158710 - 159264 + | metal dependent phosphohydrolase TERM 230 160060 - 160040 - g 71 -4.6 -4.62069 | TGGGGATTGCAAAAA GACCCCAG AATGG CAGAGGTC GTGGGGAGAGCTCAG Dhaf_0151 159296 - 160519 + | dihydropteroate synthase Dhaf_0152 160509 - 160877 + | dihydroneopterin aldolase Dhaf_0153 160874 - 161347 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 231 161505 - 161527 + F 87 -6.3 -5.1101 | gap 1, opp_overlap 161505 GCAGAGCATAGCAGA GCACCTTCAC GTTT GTGG-GGTGC TTTTTTACATGATCA Dhaf_0154 161578 - 162456 + | NAD-dependent glycerol-3-phosphate dehydrogenase domain protein Dhaf_0155 162453 - 163301 + | pantoate/beta-alanine ligase Dhaf_0156 163302 - 163685 + | aspartate 1-decarboxylase TERM 232 164591 - 164605 + GF 70 -3.5 -4.8048 | gap 1 ACCGCTCTGTTTATT CCG-GG AGCA CCGCGG TTTTTAATCTCAGAA TERM 233 164932 - 164913 - gf 70 -7.1 -3.76224 | opp_overlap 164913, overlap 164914 TCCGCACGGATGAAA GGGGAAG GACAAG CCTCCCC AATCTTTACGCCAAT TERM 234 165226 - 165212 - gf 72 -7.1 -3.94877 | ATCCGGGAAGAAGAA GGCCT GAAGA AGGCC ATTAAGCTTATAAGG Dhaf_0157 163844 - 165469 + | L-aspartate oxidase Dhaf_0158 165435 - 166319 + | nicotinate-nucleotide pyrophosphorylase TERM 235 166742 - 166726 - g 91 -13.7 -3.53091 | AGTCTGTTGCTTAAA CCCAGGC TGA GCCTGGG GGATGCGGCGAAGCT Dhaf_0159 166309 - 167289 + | biotin/acetyl-CoA-carboxylase ligase Dhaf_0160 167345 - 168121 + | putative transcriptional acitvator, Baf family TERM 236 168160 - 168174 + G 76 -7 -4.38154 | TTTAGGAAAATTTGA GCTGGG CAT CCCTGC TTTTCTCGCCCCTAT TERM 237 168498 - 168463 - g 78 -6 -4.66264 | opp_overlap 168470, overlap 168464 168465 TAAAATTGTCAAAAA CGGGGAAGGTTCGGCA TTGC TGCAGGACCTTCCCTT AGCGCAGCGCATTGC TERM 238 168497 - 168464 - g 73 -9.5 -3.38674 | opp_overlap 168470, overlap 168463 168465 AAAATTGTCAAAAAC GGGGAAGGTTCGGCA TTGC TGCAGGACCTTCCCT TAGCGCAGCGCATTG TERM 239 168496 - 168465 - g 81 -13 -2.6212 | opp_overlap 168470, overlap 168464 168463 AAATTGTCAAAAACG GGGAAGGTTCGGCA TTGC TGCAGGACCTTCCC TTAGCGCAGCGCATT Dhaf_0161 168140 - 169105 + | TIM-barrel protein, nifR3 family Dhaf_0162 169304 - 169774 + | transcription elongation factor GreA TERM 240 169803 - 169837 + F 100 -14.4 -3.57263 | opp_overlap 169808 169809, overlap 169808 169809 ACTCAGGTATCCTGA CAAAAGGTCGGCAAGA AAT TCTTGCCGACACTTTG TTTAACGATGAAAGT TERM 241 169832 - 169808 - f 100 -12.9 -4.38712 | opp_overlap 169803 169808 169809, overlap 169809 GGTATCCTGACAAAA GGTCGGCAAGA AAT TCTTGCCGACA CTTTGTTTAACGATG TERM 242 169808 - 169833 + F 100 -12.7 -4.42806 | gap 1, opp_overlap 169808 169809, overlap 169803 169809 GGTATCCTGACAAAA G-GTCGGCAAGA AAT TCTTGCCGACAC TTTGTTTAACGATGA TERM 243 169809 - 169831 + F 100 -16.4 -2.54639 | opp_overlap 169809 169808, overlap 169808 169803 GTATCCTGACAAAAG GTCGGCAAGA AAT TCTTGCCGAC ACTTTGTTTAACGAT TERM 244 169831 - 169809 - f 100 -16.4 -3.22906 | opp_overlap 169808 169803 169809, overlap 169808 GTATCCTGACAAAAG GTCGGCAAGA AAT TCTTGCCGAC ACTTTGTTTAACGAT TERM 245 170561 - 170578 + G 73 -8.3 -3.86897 | overlap 170557 CATACGATTCCGGGT GGGGCTG CTGC CCGCCCC TTTATCACCCATCAC Dhaf_0163 169967 - 171433 + | lysyl-tRNA synthetase TERM 246 171468 - 171499 + T 75 -7.4 -4.24422 | gap 1, opp_overlap 171468 GCTTGGTCTACACTA GGGAGACGAATGT ATAACGA GCAT-CGTCTCCC TTTCCTTTATTCTGC TERM 247 171815 - 171801 - T 86 -10 -3.93695 | GGTATCATTTATAAA TGTGGC TCA GCCACA AAAGCAAAAAAAGGT TERM 248 172566 - 172548 - T 71 -6.6 -4.07687 | AGTCTGGTGTGAAAA CCTAGGGC TCA ACCCTGGG ACTGCATCGGAAACT TERM 249 174372 - 174353 - T 70 -7.8 -3.66803 | opp_overlap 174352 174351 CGGGAACAGCCCAAA CCAATCCC TTCG GGGGTTGG GGTTGTAGGACCTTC TERM 250 174537 - 174522 - T 74 -10.4 -2.71011 | overlap 174508 174509 ACCCCGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTCC TERM 251 175413 - 175391 - T 88 -9.8 -4.15833 | ATGAGTATGCGAAAA GGTGAGTGAG AAT CTCACCCGCC GAAAACCTAAGGATT TERM 252 176546 - 176530 - T 70 -5.1 -4.4715 | opp_overlap 176535, overlap 176534 GCTCAACGGATAAAA GCTACCC TGG GGATAAC AGGCTTATCTCCCCC TERM 253 177252 - 177285 + T 100 -22.7 -3.54459 | opp_overlap 177257, overlap 177257 TCGTTGCCAGGTAGT GCAAAGAGACCATCG ATTA CGATGGTCTCTTTGC TTTGGGGCAAATTAC TERM 254 177280 - 177257 - T 100 -15.4 -3.61178 | opp_overlap 177252 177257 GCCAGGTAGTGCAAA GAGACCATCG ATTA CGATGGTCTC TTTGCTTTGGGGCAA TERM 255 177257 - 177280 + T 100 -15.4 -4.05788 | opp_overlap 177257, overlap 177252 GCCAGGTAGTGCAAA GAGACCATCG ATTA CGATGGTCTC TTTGCTTTGGGGCAA TERM 256 177314 - 177297 - T 71 -8.5 -3.53012 | opp_overlap 177297 TTGCTTTGGGGCAAA TTACGCA CCAG TGCGTAA TTTGGATCCTCATAG TERM 257 177297 - 177314 + T 73 -8.5 -3.69323 | opp_overlap 177297 TTGCTTTGGGGCAAA TTACGCA CCAG TGCGTAA TTTGGATCCTCATAG Dhaf_0164 179273 - 177648 - | methyl-accepting chemotaxis sensory transducer TERM 258 178128 - 178105 - G 78 -11.7 -3.09517 | opp_overlap 178104, overlap 178102 ACCACAGAGAAACCA CGCCCGTGC TCACCT GCACGGGCA GCTTCAATAGCCGCA TERM 259 179479 - 179455 - H 95 -9.3 -4.48449 | opp_overlap 179455 CGAGCAAAAGAGAAA GGTCAAGAGCA TTA CACTCCTGACC TTGTTCGCAAAATGA TERM 260 179528 - 179557 + H 73 -8.7 -3.5013 | opp_overlap 179534, overlap 179529 179534 CGTCATACTAATTGG TTCAAATTCGACA CCAG TGTCGAATTTGGC TTAATTCATTTGCCG TERM 261 179529 - 179556 + H 83 -12.2 -2.69596 | opp_overlap 179534, overlap 179528 179534 GTCATACTAATTGGT TCAAATTCGACA CCAG TGTCGAATTTGG CTTAATTCATTTGCC TERM 262 179534 - 179551 + H 75 -8.5 -3.81428 | opp_overlap 179534, overlap 179529 179528 ACTAATTGGTTCAAA TTCGACA CCAG TGTCGAA TTTGGCTTAATTCAT TERM 263 179551 - 179534 - H 71 -8.5 -3.55801 | opp_overlap 179529 179528 179534 ACTAATTGGTTCAAA TTCGACA CCAG TGTCGAA TTTGGCTTAATTCAT Dhaf_0165 179841 - 181361 + | D-alanine-activating enzyme Dhaf_0166 181358 - 182506 + | membrane bound O-acyl transferase MBOAT family protein Dhaf_0167 182538 - 182771 + | D-alanyl carrier protein Dhaf_0168 182768 - 183967 + | DltD domain protein Dhaf_0169 183939 - 184061 + | hypothetical protein TERM 264 184114 - 184150 + T 79 -6.7 -4.73448 | gap 1, opp_overlap 184114 ATTTGAAAAGAAAAA GCCCTAAG-GCAGCAT ATTAAA ATGCTTTGCTTAGGGC TTTTTAGATCTCTGT TERM 265 184150 - 184114 - T 87 -4.5 -5.46706 | gap 1, opp_overlap 184114 ATTTGAAAAGAAAAA GCCCTAAG-GCAGCAT ATTAAA ATGCTTTGCTTAGGGC TTTTTAGATCTCTGT Dhaf_0170 185694 - 184171 - | sodium/sulphate symporter TERM 266 184789 - 184777 - G 90 -9.1 -4.57837 | AGATTTGGGCAAAAA GCTGG GAG CCAGC AGCATGAGAATGAAG Dhaf_0171 186092 - 187972 + | Arylsulfotransferase TERM 267 188027 - 187992 - f 100 -10.4 -4.36595 | opp_overlap 187992 CAGGCAAAGTTAAAA CCCTCAGCAACTGTTC ATAG GAACGGATGTTGAGGG TTTCCTTGTGGATGC TERM 268 187992 - 188027 + F 100 -14.8 -4.00868 | opp_overlap 187992 CAGGCAAAGTTAAAA CCCTCAGCAACTGTTC ATAG GAACGGATGTTGAGGG TTTCCTTGTGGATGC Dhaf_0172 188169 - 189710 + | FAD dependent oxidoreductase TERM 269 189961 - 189945 - g 77 -2.9 -5.30199 | AAAAAGGAACAAAAA CACCGCT TCG AGGAGTG CTTACCGGACTTATT TERM 270 190216 - 190194 - g 85 -7 -4.92757 | opp_overlap 190194 190214 TTATTAAGAACAAAA GACTTACCTA TTT TGGGCAAGTC TTATTAGGCTTTGGT TERM 271 191477 - 191453 - g 73 -7.1 -4.1964 | opp_overlap 191455 GTGAATATCGCAAAA TATGCTATGGC AGA GCCTAAGCATA AATTGACTTGAGAAA Dhaf_0173 189809 - 191488 + | Na/Pi-cotransporter II-related protein TERM 272 191526 - 191551 + T 100 -10.5 -4.42788 | gap 1 AAAGAATTATGATGA CCGTCACCTCAT AAT ATG-GGTGGCGG TTTTCTCCCATTGAA TERM 273 191674 - 191649 - T 100 -12.1 -5.63236 | opp_overlap 191649 AGGTAAAAATAAAAA TGCAACAAAAT CACA ATTTTGTTGCA TTTTTTATTTTAATA TERM 274 191649 - 191674 + T 100 -12.1 -5.83211 | opp_overlap 191649 AGGTAAAAATAAAAA TGCAACAAAAT CACA ATTTTGTTGCA TTTTTTATTTTAATA TERM 275 191734 - 191722 - T 73 -9.1 -3.51825 | GCATGTCAATTATAA TGGGC TGA GCCCA AAGCTCCAGATATTG Dhaf_0174 192328 - 191768 - | integrase family protein TERM 276 192494 - 192527 + H 100 -15.7 -5.2197 | opp_overlap 192503 TTTCGTAATACGCTA TTTATGCAACAAAAT TGTG ATTTTGTTGCATAAA TTTTTGATTTTTATA TERM 277 192988 - 192974 - g 74 -10 -3.54424 | opp_overlap 192960 192967 CGGGAGTTTCTCAAA GATCCC TTT GGGATC TTGGGGTGGGGGGGA Dhaf_0175 192583 - 193398 + | metal dependent phosphohydrolase TERM 278 193469 - 193429 - f 100 -16.5 -3.70902 | gap 1, opp_overlap 193429 193433, overlap 193433 TCCTGGAGATTCAAA GAAAGCCGCTCCATAATC CCAAGC GATTAT-GAGCGGCTTTC TTTTAAGTCAATCAC TERM 279 193429 - 193469 + F 100 -16.5 -4.19817 | gap 1, opp_overlap 193429 193433, overlap 193433 TCCTGGAGATTCAAA GAAAGCCGCTCCATAATC CCAAGC GATTAT-GAGCGGCTTTC TTTTAAGTCAATCAC TERM 280 193465 - 193433 - f 100 -11.5 -4.48299 | gap 1, opp_overlap 193429 193433, overlap 193429 GGAGATTCAAAGAAA GCCGCTCCATAATC CCAAGC GATTAT-GAGCGGC TTTCTTTTAAGTCAA TERM 281 193433 - 193465 + F 100 -11.5 -4.68908 | gap 1, opp_overlap 193433 193429, overlap 193429 GGAGATTCAAAGAAA GCCGCTCCATAATC CCAAGC GATTAT-GAGCGGC TTTCTTTTAAGTCAA Dhaf_0176 193712 - 194029 + | hypothetical protein TERM 282 194080 - 194098 + F 87 -4.6 -5.42862 | opp_overlap 194074, overlap 194074 GCATATAAATGCTTA GGACAA GCATAAG TTGTCC TTTTTTTAGACATCT TERM 283 194324 - 194313 - g 74 -4.4 -4.8667 | CAGACCGGACAAAAA GGTT TTGG AACC GGAGAAGAGCTTTGC TERM 284 194619 - 194631 + G 73 -4.8 -4.72986 | TGACGCGGATAATCT GGTC AATGA GACC TTTTTAGTCGAAATG Dhaf_0177 194176 - 195453 + | glycosyl transferase family 2 TERM 285 195545 - 195520 - f 72 -7.6 -3.76048 | opp_overlap 195520 CGGCAATCAAGATAA GGGGATCTCT GAGCAG AGAGATCTCC TTTTGCCGTTACATT TERM 286 195520 - 195545 + F 88 -9.8 -4.20354 | opp_overlap 195520 CGGCAATCAAGATAA GGGGATCTCT GAGCAG AGAGATCTCC TTTTGCCGTTACATT Dhaf_0178 195665 - 196522 + | agmatinase TERM 287 197207 - 197239 + F 100 -12.8 -5.29782 | opp_overlap 197207 197206 197237 ACTTAAAGAAGGAAG GCCTTGAAATCGCT GCCAA AGCGGATTCAAGGC TTTTTTATGCCTGTC TERM 288 197239 - 197207 - f 75 -10.6 -2.76911 | opp_overlap 197207, overlap 197206 197237 ACTTAAAGAAGGAAG GCCTTGAAATCGCT GCCAA AGCGGATTCAAGGC TTTTTTATGCCTGTC Dhaf_0179 197350 - 198186 + | DNA adenine methylase Dhaf_0180 198224 - 199480 + | hypothetical protein TERM 289 199487 - 199516 + F 74 -6.5 -4.55128 | gap 1 GAGCATTAACTCAAG CCGGGTG-ATACTT GAC AAGTAAGCATCCGG TTTTGGTTTACCGCT TERM 290 200883 - 200912 + G 71 -4.1 -4.82901 | opp_overlap 200883 200884, overlap 200884 TCATGAGTATATTAA CCCTGTGGTGGTC ATGG GACCCCAGCAGGC TTTTTATGCCCAGCA Dhaf_0181 199681 - 201132 + | Orn/Lys/Arg decarboxylase major region Dhaf_0182 201135 - 201989 + | spermidine synthase TERM 291 202009 - 202041 + F 78 -4.3 -5.1764 | gap 2, opp_overlap 202009 CCGGTGAGGACTTAA GACAAGGGTGTGAGC TGATT GCT-G-ACCCTTGTC TTTTTATATTATCTG Dhaf_0183 202228 - 202635 + | hemerythrin-like metal-binding protein TERM 292 202701 - 202648 - f 95 -8.1 -5.00138 | gap 1, opp_overlap 202650 202656, overlap 202650 TAGTCAAAGGAAAAA TAGGGAGTGTCGCCAA-ACGGCTTTT TGA AAGAGCTGAGTCGGCGGCACTCCCTT TGTATGTCCGTCTAT TERM 293 202650 - 202699 + F 100 -15.1 -4.14392 | gap 1, opp_overlap 202650 202648, overlap 202656 GTCAAAGGAAAAATA GGGAGTGTCGCC-AAACGGCTTTT TGA AAGAGCTGAGTCGGCGGCACTCCC TTTGTATGTCCGTCT TERM 294 202699 - 202650 - f 93 -10.7 -4.11472 | gap 1, opp_overlap 202650 202656, overlap 202648 GTCAAAGGAAAAATA GGGAGTGTCGCCAA-ACGGCTTTT TGA AAGAGCTGAGTCGGCGGCACTCCC TTTGTATGTCCGTCT TERM 295 202843 - 202863 + F 80 -11.3 -2.68434 | opp_overlap 202845, overlap 202845 CGAGGTAAACCGCAA TATGAGCAA ACC TTGCTCATA TACTCTACTATGGAG TERM 296 202861 - 202845 - f 72 -9.5 -3.12936 | opp_overlap 202843 202845 AGGTAAACCGCAATA TGAGCAA ACC TTGCTCA TATACTCTACTATGG TERM 297 202845 - 202861 + F 70 -9.5 -2.8844 | opp_overlap 202845, overlap 202843 AGGTAAACCGCAATA TGAGCAA ACC TTGCTCA TATACTCTACTATGG Dhaf_0184 202890 - 203765 + | Sporulation protein YtxC TERM 298 204021 - 204047 + F 100 -11.6 -5.59502 | opp_overlap 204011 204021 AACCACGGGAATAAA GTTCTCGTCCCA TAT TGGGATGAGGGC TTTTTTAGTTTTTTC TERM 299 204393 - 204407 + G 73 -8.6 -3.82505 | TTAGGGATTGGCCCC GCCATT GAC AATGGC TTCTATTATGATTTT TERM 300 204511 - 204501 - g 73 -3.2 -4.96996 | GTCAAAGAAAATAAA CGCT ACG AACG AAAAGAGATCTCCCG TERM 301 205664 - 205681 + G 73 -9.9 -3.3164 | overlap 205648 CATTGAGCGCTTCAT TGCTCTG CTCA CAGAGCA TTATGCCGGTGCCTT Dhaf_0185 204102 - 206021 + | threonyl-tRNA synthetase TERM 302 206035 - 206071 + F 100 -14 -4.42386 | opp_overlap 206040, overlap 206040 AAGATAAGACTCAGG CAAAAGGATTCAGACT TATGT GGTTTGAATCCTTTTG TTTTGTCAATGGCCA TERM 303 206040 - 206066 + F 95 -8.1 -5.19275 | opp_overlap 206040, overlap 206035 AAGACTCAGGCAAAA GGATTCAGACT TATGT GGTTTGAATCC TTTTGTTTTGTCAAT TERM 304 207079 - 207060 - g 100 -10.8 -5.88565 | GTGACAAGAAAAAAA GGTATCTC CCGG GAGATACC ACTGAAAGAACTCGG Dhaf_0186 206448 - 207311 + | protein of unknown function DUF6 transmembrane Dhaf_0187 208348 - 207359 - | diaminopimelate dehydrogenase TERM 305 208468 - 208478 + r 86 -6.8 -5.0133 | opp_overlap 208460 AGACTAACAGAATTT CGGA ATT TCCG TTTTTTAAAAAACTA Dhaf_0188 209849 - 208491 - | transposase IS1182 family protein TERM 306 209821 - 209807 - G 71 -7.2 -4.12198 | overlap 209786 GAGAAGTTTCTAAAA TTTCCT CCA AGGAAA ATAGACGTTCTTGGC TERM 307 209868 - 209879 + H 73 -5.8 -4.45168 | GGAGTACTCCTTTCC CACC TCTC GGTG TTTGTGTTTTGGACG TERM 308 209916 - 209926 + H 89 -6.8 -5.32944 | ATTTCGAGATGTTGG GGAG GTA CTCC TTTTTTAGTTGTCAA TERM 309 210024 - 210045 + H 74 -8 -4.03219 | opp_overlap 210024 CGATAGCATTTAAAA TCCTGTCC ACATAA GGGCAGGA TTCTTCTTATGGCAT Dhaf_0189 210221 - 211957 + | sulfoacetaldehyde acetyltransferase Dhaf_0190 212058 - 213590 + | hypothetical protein Dhaf_0191 213605 - 214723 + | Succinate--CoA ligase (ADP-forming) TERM 310 215067 - 215051 - g 78 -5.2 -4.85599 | TGCAGCTGAGAAAAA TTGCTT TAGAG AAGCAA GCCATGGTTATTGGC Dhaf_0192 214720 - 215598 + | CoA-binding domain protein Dhaf_0193 215751 - 217247 + | anion transporter TERM 311 217341 - 217288 - f 100 -13.3 -4.7078 | gap 1, overlap 217289 217291 217292 CTAAGTATTCAAAAA GTAGTATTGCAGATGGGCCGATTGGA GAA TCCGATCGGTCCATCTGCAAT-CAAT AGAAATAGCTTAAAA TERM 312 217340 - 217289 - f 100 -16.8 -3.41745 | gap 1, overlap 217288 217291 217292 TAAGTATTCAAAAAG TAGTATTGCAGATGGGCCGATTGGA GAA TCCGATCGGTCCATCTGCAAT-CAA TAGAAATAGCTTAAA TERM 313 217338 - 217291 - f 100 -19.4 -3.26807 | gap 1, overlap 217289 217288 217292 AGTATTCAAAAAGTA GTATTGCAGATGGGCCGATTGGA GAA TCCGATCGGTCCATCTGCAAT-C AATAGAAATAGCTTA TERM 314 217338 - 217292 - f 100 -19.6 -2.55361 | overlap 217291 217289 217288 GTATTCAAAAAGTAG TATTGCAGATGGGCCGATTGGA GAA TCCGATCGGTCCATCTGCAATC AATAGAAATAGCTTA Dhaf_0194 217448 - 218164 + | transcriptional regulator, GntR family TERM 315 218188 - 218215 + F 95 -7.8 -5.03314 | overlap 218180 AAGGTATCCGCCCCC GGCTGTTGATAG AATT TTGTCAACAGTC TTTTTTGCACCTAAG Dhaf_0195 218331 - 218987 + | cobalamin B12-binding domain protein Dhaf_0196 218984 - 219991 + | Uroporphyrinogen decarboxylase (URO-D) TERM 316 220278 - 220302 + G 71 -2.7 -4.87291 | overlap 220298 CAGACTTGTCCCTGT TGTACCGGAGA AGC TTGCCGGGGCA TTTTTCATTCCCATG TERM 317 221149 - 221139 - g 83 -2.4 -5.56263 | AGTACAAAAGAAAAA GAGC TGG GCAC AGGGTTGGGATTGCC Dhaf_0197 219984 - 221294 + | histidine kinase TERM 318 222496 - 222474 - g 100 -8.5 -5.60993 | opp_overlap 222478 TGGCGGACAAAAAAA GATTCTCCC TGAGC AGGAGAATC TGGGAGCCTTTTCTT Dhaf_0198 221287 - 222672 + | two component, sigma54 specific, transcriptional regulator, Fis family Dhaf_0199 223224 - 222673 - | hypothetical protein TERM 319 223255 - 223290 + H 100 -13.6 -3.14344 | opp_overlap 223255 223258 223263, overlap 223263 ATGATTAGGCCTAAA TAAGAAAACTCTTGCT TTTG AGCAGGAGTTTTTTTA TTGCTCAGAGACCTC TERM 320 223290 - 223255 - H 78 -9.2 -3.58522 | opp_overlap 223255 223263, overlap 223258 223263 ATGATTAGGCCTAAA TAAGAAAACTCTTGCT TTTG AGCAGGAGTTTTTTTA TTGCTCAGAGACCTC TERM 321 223282 - 223263 - H 84 -6.4 -5.00196 | opp_overlap 223255 223263, overlap 223258 223255 GCCTAAATAAGAAAA CTCTTGCT TTTG AGCAGGAG TTTTTTTATTGCTCA TERM 322 223263 - 223282 + H 100 -8.6 -5.84381 | opp_overlap 223263 223258 223255, overlap 223255 GCCTAAATAAGAAAA CTCTTGCT TTTG AGCAGGAG TTTTTTTATTGCTCA TERM 323 223482 - 223495 + H 82 -6.7 -4.78029 | opp_overlap 223481 AGAACGTTCACATAG CTGCT GATA AGCAG TTTTAGTTTTGTTGG TERM 324 223661 - 223675 + G 71 -7.1 -3.99324 | AGACGGCTCTGGCAG CAGGG GCTCA CCCTG TTTGTCGTCGTAGCC TERM 325 224746 - 224763 + G 70 -9.9 -3.16742 | CTGCTGTTTAGCCGC CTTCTGG CCGG CCAGAAG TTCGTCACGCTTGGA Dhaf_0200 223613 - 224815 + | protein of unknown function DUF214 Dhaf_0201 224824 - 225537 + | ABC transporter related Dhaf_0202 225569 - 226024 + | hypothetical protein TERM 326 226201 - 226191 - g 71 -4.6 -4.56597 | overlap 226196 CCTCTTCCGGAAAAA GCAG AGG CCGC AGGGCAAGCAGGATA Dhaf_0203 226074 - 226391 + | hypothetical protein Dhaf_0204 226426 - 226659 + | hypothetical protein Dhaf_0205 226643 - 227089 + | Rieske (2Fe-2S) domain protein Dhaf_0206 227091 - 227729 + | Cytochrome b/b6 domain protein Dhaf_0207 227742 - 228137 + | subunit IV of cytochrome bc complex petd TERM 327 228133 - 228147 + F 80 -5 -5.14682 | overlap 228135 ATATTGCCTTGCATT TTTGAC ACT GTCAGA TTTTCTTTATTGTGG Dhaf_0208 228195 - 228734 + | hypothetical protein TERM 328 230629 - 230658 + G 71 -6.4 -4.30719 | overlap 230630 TGCACCAACTTCTGC TCGGCCCTCCAT CAGGAA ATGCAGGGCTGG TTTATTGTCAAACCA Dhaf_0209 228787 - 230685 + | Nitrous-oxide reductase TERM 329 230743 - 230712 - f 71 -9.4 -2.92618 | overlap 230711 230715 GCTTTATAGAAGAAT CGAGAGGGATCCTT GCTC AGGGATCCCTCCCC CCCTAATCGATAGGA TERM 330 230740 - 230715 - f 83 -11.9 -2.70263 | overlap 230712 230711 TTATAGAAGAATCGA GAGGGATCCTT GCTC AGGGATCCCTC CCCCCCTAATCGATA Dhaf_0210 230772 - 231371 + | hypothetical protein Dhaf_0211 231352 - 232857 + | periplasmic copper-binding TERM 331 233156 - 233168 + G 75 -6.2 -4.52589 | opp_overlap 233141 233152 CATGGAATGGATCCA GGCC CAGGA GGCC TTTTATGTACAAGGC Dhaf_0212 232854 - 233396 + | hypothetical protein TERM 332 234190 - 234226 + G 74 -9.5 -3.61517 | GGATGATCATACCTC TCCTGATTGCGGC AATTTTGTTCG GCCGCAAACAGGA TTATTAGGAGGGGAT Dhaf_0213 233397 - 234233 + | membrane protein NosY Dhaf_0214 234245 - 235156 + | ABC transporter related TERM 333 235296 - 235317 + G 100 -10.1 -5.43487 | opp_overlap 235296 235298 ATGATTTGTATGGAA GACGGGTGG AACT CTGCCCGTC TTTTTTGTGTGATTT Dhaf_0215 235271 - 235867 + | translation initiation factor IF-3 Dhaf_0216 235888 - 236085 + | ribosomal protein L35 Dhaf_0217 236192 - 236554 + | ribosomal protein L20 TERM 334 236583 - 236568 - f 89 -10.4 -3.97959 | opp_overlap 236568 236581 236581, overlap 236559 AAAGAATACATCAAA GGGTGC TGAG GCACCC TTTTTACATAGGGGT TERM 335 236568 - 236583 + F 100 -10.4 -4.66163 | opp_overlap 236568 236559, overlap 236581 236581 AAAGAATACATCAAA GGGTGC TGAG GCACCC TTTTTACATAGGGGT Dhaf_0218 236612 - 237427 + | tRNA/rRNA methyltransferase (SpoU) TERM 336 237722 - 237745 + F 71 -8.8 -3.28765 | overlap 237725 ACCAAGAGGAGTCCT CAGTTCCGGC TGAT GCCGGAGGTG TTAAATTTCCCCTGT TERM 337 237869 - 237895 + F 100 -11.7 -5.71295 | overlap 237859 TACCGCGGGAGTTAT TTCTCGTCCCT TTTAT AGGGATGAGAA TTTTTGTTTTTATAT Dhaf_0219 237958 - 238980 + | phenylalanyl-tRNA synthetase, alpha subunit TERM 338 239601 - 239651 + G 71 -10.6 -2.87344 | gap 1, overlap 239619 GGAGGGGTCCCAAGG CCCGGATTACCCAGGG-GATCCT AAGGCC AGGATTGTTCTGGATGATCCGGG TCTGTGCCAGCGCTA TERM 339 240022 - 239990 - g 81 -12.1 -2.98471 | opp_overlap 239990 239989, overlap 239979 239981 239987 TAAACAGTGAAATCA CCGACTCCACCAAAA GGA TCTTCGTGGAATCGG CTCATTTTTCCAGTG Dhaf_0220 238993 - 241398 + | phenylalanyl-tRNA synthetase, beta subunit Dhaf_0221 241421 - 241678 + | protein of unknown function DUF710 TERM 340 241716 - 241695 - f 100 -11.6 -4.16301 | opp_overlap 241695 GAGATCAGAGAGAAA GGGGACTG GCGCGA CAGTCCCC TTTTTGGCTGGGTAG TERM 341 241695 - 241716 + F 100 -11.6 -4.67353 | opp_overlap 241695 GAGATCAGAGAGAAA GGGGACTG GCGCGA CAGTCCCC TTTTTGGCTGGGTAG Dhaf_0222 241850 - 242212 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 342 242247 - 242268 + T 90 -5.9 -5.44119 | opp_overlap 242247 TGGTACCTCATGAAA GCGTAATTT TAAA GAGTTACGC TTTTTTTGCCCTGAA TERM 343 242337 - 242307 - T 100 -13.5 -5.64873 | opp_overlap 242310 242313 CTGAAGAACAAAAAA GAAGAAGAACCAG ACCTG CTGATTCTTCTTC ATGTCAAATCACTGT Dhaf_0223 242736 - 242356 - | hypothetical protein Dhaf_0224 244391 - 242772 - | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 344 244905 - 244894 - g 73 -2.2 -5.13473 | AGGATATTGAAAAAA CTGC ACAA GCAA TCCAAAATCAAACTG Dhaf_0225 244546 - 245487 + | transcriptional regulator, LysR family TERM 345 246131 - 246115 - g 82 -10.1 -3.85522 | opp_overlap 246108 AAGGCAGTAGAATAA GCAGCCA TTA CGGCTGC ATATACCCTCTTCTC Dhaf_0226 245619 - 246449 + | transcriptional regulator, MerR family TERM 346 246487 - 246505 + F 100 -11 -4.34263 | AAAAGTTCTTATTGA CCCTCTAG TTG CTGGAGGG TTTATATTATTGAGC TERM 347 246907 - 246917 + G 77 -6.8 -4.65078 | GCTTTAATCATGCCG GCTG TGA CAGC TTTTATTGCGGATAT TERM 348 247583 - 247603 + G 73 -4.7 -4.7373 | overlap 247585 GGGGCATGAACTCTA TGTTCACCA GCC TGGGGAATA TTTTTGGTCCGATCA Dhaf_0227 246568 - 247740 + | major facilitator superfamily MFS_1 Dhaf_0228 247982 - 248896 + | metalloenzyme domain protein TERM 349 249764 - 249752 - g 71 -9.1 -3.61219 | AGAAAATGGCGTAAA CGCTG GGT CAGCG GTGACAGGGGAAGAA TERM 350 250615 - 250599 - g 70 -8 -3.86283 | opp_overlap 250592 250611 GGAAGTCATAGCAAA GCTGCT TCTTT AGCAGC AAGGCGCTTGACTGT Dhaf_0229 248898 - 251516 + | peptidase U32 TERM 351 253530 - 253510 - g 80 -7.5 -4.57341 | AAGCTCCGGCAAAAA GGGCAGGTC CTT AAGCTGCCC AATGATTCTGGAGAG Dhaf_0230 251554 - 253923 + | MutS2 family protein Dhaf_0231 254000 - 254245 + | twin-arginine translocation protein, TatA/E family subunit TERM 352 254283 - 254259 - f 100 -14.4 -3.86107 | opp_overlap 254259, overlap 254262 254265 AGAGCAAGAAGAGAA GAAGAACCGG GAAGA CCGGTTCTTC TTTTTTACCCAAATG TERM 353 254259 - 254283 + F 100 -14.4 -5.0133 | opp_overlap 254259 254262 254265 AGAGCAAGAAGAGAA GAAGAACCGG GAAGA CCGGTTCTTC TTTTTTACCCAAATG TERM 354 254280 - 254262 - f 89 -10.3 -4.03767 | opp_overlap 254259, overlap 254259 254265 GCAAGAAGAGAAGAA GAACCGG GAAGA CCGGTTC TTCTTTTTTACCCAA TERM 355 254419 - 254372 - f 93 -10.8 -4.08692 | gap 1, overlap 254374 TAACTGTTCCCAAAA TACTCATAGATCGGCTTGTGTAA TTT TTTCACAAGCTGATC-ATGAGTC AGACATTCACATAAA TERM 356 254417 - 254374 - f 100 -13.4 -3.63922 | gap 1, overlap 254372 ACTGTTCCCAAAATA CTCATAGATCGGCTTGTGTAA TTT TTTCACAAGCTGATC-ATGAG TCAGACATTCACATA TERM 357 255179 - 255193 + G 72 -5.7 -4.39386 | TGAAGCGGGATATCT TAGGC ATAAA GCCTA TTTTGATGCTTTAGC Dhaf_0232 254697 - 256268 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein Dhaf_0233 256505 - 258496 + | sigma54 specific transcriptional regulator, Fis family TERM 358 258926 - 258903 - g 71 -7.4 -4.03696 | opp_overlap 258903 258897 258904, overlap 258893 258904 AACAACCAGCAGAAA CCCATGAGCC TATG AGCCCATGGA TTGTTGTTGGTGGAG Dhaf_0234 258605 - 258991 + | hypothetical protein TERM 359 259078 - 259107 + T 100 -15.2 -5.28826 | opp_overlap 259078 AAAGCCCATAAAAAA GTCCGTGTGAAA ACCAAA TTTCACACGGAC TTTTTTATGGGCTTT TERM 360 259107 - 259078 - T 100 -15.2 -5.28826 | opp_overlap 259078 AAAGCCCATAAAAAA GTCCGTGTGAAA ACCAAA TTTCACACGGAC TTTTTTATGGGCTTT Dhaf_0235 261763 - 259121 - | penicillin-binding protein, 1A family TERM 361 260897 - 260912 + g 73 -7.5 -4.19506 | ATATTGATAATTGGT GCCGG CGACTA CCGGC TTTTCAGATTCGGCT TERM 362 261021 - 261040 + g 79 -3.4 -5.2166 | opp_overlap 261021, overlap 261023 GAGTCTTTCATTACA CCCAGGAC GATG GTCCGGCG TTTTTTAGCTTCTTC TERM 363 262013 - 262037 + r 86 -7.9 -4.66833 | opp_overlap 262007 262013 TAAAAAAGATGATAA GCCCGTAGT CACTGAA ACTATGGGC TTTTTCACGTTCAGA Dhaf_0236 263864 - 262074 - | transposase IS4 family protein TERM 364 263943 - 263930 - H 100 -8.1 -5.33866 | opp_overlap 263930, overlap 263923 TAAATGTATAAAAAA TGCGG AAAT CCGCA TTTTTCTAAGATAAT TERM 365 263930 - 263943 + H 91 -8.1 -4.86001 | opp_overlap 263930 263923 TAAATGTATAAAAAA TGCGG AAAT CCGCA TTTTTCTAAGATAAT Dhaf_0237 264186 - 265448 + | tyrosyl-tRNA synthetase TERM 366 265473 - 265499 + F 85 -9.5 -4.19506 | opp_overlap 265469 265473 ATTTTAGATAATTAA CGGCAGCAT AGATTTATA ATGCTGCCG TTTTCGACTTAAGGT TERM 367 265499 - 265473 - f 76 -9.5 -3.49886 | opp_overlap 265473, overlap 265469 ATTTTAGATAATTAA CGGCAGCAT AGATTTATA ATGCTGCCG TTTTCGACTTAAGGT TERM 368 266640 - 266622 - f 71 -6.6 -4.07687 | AGTCTGGTGTGAAAA CCTAGGGC TCA ACCCTGGG ACTGCATCGGAAACT TERM 369 268261 - 268242 - f 70 -7.8 -3.66803 | opp_overlap 268241 268240 CGGGAACAGCCCAAA CCAATCCC TTCG GGGGTTGG GGTTGTAGGACCTTC TERM 370 268426 - 268411 - f 74 -10.4 -2.71011 | overlap 268397 268398 ACCCCGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTCC TERM 371 269452 - 269430 - f 88 -9.8 -4.15833 | ATGAGTATGCGAAAA GGTGAGTGAG AAT CTCACCCGCC GAAAACCTAAGGATT TERM 372 270585 - 270569 - f 70 -5.1 -4.4715 | opp_overlap 270574, overlap 270573 GCTCAACGGATAAAA GCTACCC TGG GGATAAC AGGCTTATCTCCCCC TERM 373 271295 - 271318 + F 100 -15.4 -4.05788 | opp_overlap 271299 TGCCAGGTAGTGCAG GAGACCATCG ATTA CGATGGTCTC TTTGCTTTGGGGCAA TERM 374 271321 - 271366 + F 100 -15.7 -3.82083 | opp_overlap 271335 TTACGATGGTCTCTT TGCTTTGGGGCAAATTACGCA CCAG TGCGTAATTTGGCATAAAGCA TTTAAGTTCTCGTGG TERM 375 271352 - 271335 - f 71 -8.5 -3.53012 | opp_overlap 271321 TTGCTTTGGGGCAAA TTACGCA CCAG TGCGTAA TTTGGCATAAAGCAT TERM 376 271548 - 271566 + F 80 -8.8 -3.92324 | overlap 271550 CACGGGAAGCAGCGT GGCGAAAG GTT CATTCGCC TTTCGTGTTGCCAGG TERM 377 271958 - 271980 + G 73 -5.6 -4.52873 | TCCGGAGTGGAAATT GAAAAGATCC TTT GGGTATTTTC TTATTTTTGTAACCA TERM 378 272069 - 272059 - g 74 -4 -4.87665 | CTGTATGGATAAAAA CAAT CAT ATTG CTAGGCATTGGCGCT Dhaf_0238 271662 - 272438 + | protein of unknown function DUF81 TERM 379 272745 - 272761 + G 73 -5.1 -4.5477 | overlap 272747 ATATAGAAAAGCATC TGCGGAT TTT ATCCGGA TTTTATGGTATATTG Dhaf_0239 272435 - 273190 + | protein of unknown function DUF328 TERM 380 273573 - 273585 + G 75 -5.5 -4.69053 | opp_overlap 273573 TGGAGTAAGAGGAGA GCGTC CAG GATGC TTTTATTGAGTGATC Dhaf_0240 273225 - 274124 + | GCN5-related N-acetyltransferase Dhaf_0241 274255 - 274578 + | Thioredoxin domain protein TERM 381 274594 - 274614 + T 100 -14.1 -4.77036 | opp_overlap 274594 AATGATTTTAAAAAA CACCTTGGA AGT TCCAAGGTG TTTTTGATCGTGAGG TERM 382 274614 - 274594 - T 100 -14.1 -5.07053 | opp_overlap 274594 AATGATTTTAAAAAA CACCTTGGA AGT TCCAAGGTG TTTTTGATCGTGAGG Dhaf_0242 275131 - 274679 - | transcriptional regulator, XRE family TERM 383 274998 - 275019 + g 73 -4.5 -4.70169 | gap 1, overlap 274985 CTGGCATAATCTCTG CCCTT-TTCA ATC TGGACAAGGG TTTTCTTAGATATGC TERM 384 275044 - 275069 + g 73 -7.6 -4.07885 | opp_overlap 275032 275043, overlap 275032 275032 ATATGCCGATGATAT CGGCCATTCT ATCTTG AGAATAGCCG TTTTCAACCCGAATC TERM 385 275177 - 275219 + H 100 -9.5 -4.77698 | gap 1, opp_overlap 275179 275199, overlap 275179 275180 275206 AATAAGTATTGATTG AAT-TTTCCCTTATAGTGTA TAAT TACACTGTAAGGGAAATATA TTTCTTTTACTATTA TERM 386 275179 - 275217 + H 100 -12.1 -3.98052 | gap 1, opp_overlap 275179 275199, overlap 275177 275180 275206 TAAGTATTGATTGAA T-TTTCCCTTATAGTGTA TAAT TACACTGTAAGGGAAATA TATTTCTTTTACTAT TERM 387 275216 - 275179 - H 84 -11.5 -3.0894 | opp_overlap 275179 275177 275180 275206, overlap 275199 TAAGTATTGATTGAA TTTTCCCTTATAGTGTA TAAT TACACTGTAAGGGAAAT ATATTTCTTTTACTA TERM 388 275180 - 275215 + H 100 -17.2 -3.55857 | opp_overlap 275179 275199, overlap 275179 275177 275206 AAGTATTGATTGAAT TTTCCCTTATAGTGTA TAAT TACACTGTAAGGGAAA TATATTTCTTTTACT Dhaf_0243 275270 - 275875 + | hypothetical protein TERM 389 275911 - 275931 + F 86 -7.6 -4.58466 | opp_overlap 275911 TATAATTGAAGTAAA GGAAGGTT AAGAA AGCCTTCC TTTTGTGCTTATACA TERM 390 276509 - 276499 - g 71 -6.8 -4.24711 | opp_overlap 276490, overlap 276490 TAAAAGGGGAAGAAA TCCC TTT GGGA GCAAGAATTATTGGC Dhaf_0244 276084 - 276746 + | metal dependent phosphohydrolase Dhaf_0245 276918 - 277367 + | hypothetical protein TERM 391 277409 - 277455 + T 100 -12.3 -3.965 | opp_overlap 277409, overlap 277404 GGATGAATAGGTAAA GGGAGTACCGCCAAACTACTT TGCTC AAGCAGTGGGGCGATACTCCC TTATTACTTTTCAGG TERM 392 277455 - 277409 - T 100 -16.7 -3.77831 | opp_overlap 277409 277404 GGATGAATAGGTAAA GGGAGTACCGCCAAACTACTT TGCTC AAGCAGTGGGGCGATACTCCC TTATTACTTTTCAGG Dhaf_0246 277639 - 277484 - | hypothetical protein Dhaf_0247 279136 - 277667 - | hypothetical protein TERM 393 279089 - 279106 + g 91 -3.5 -5.8187 | gap 1, overlap 279089 279090 CCAGGCCGCCCACCA G-TCTTCA TTT TGAAGAGC TTTTTTTCTTGCGTA TERM 394 280328 - 280340 + G 75 -10.5 -3.40112 | overlap 280326 280327 CGGGTGGAACCGTCG CCGCC GAC GGCGG TCTTTGGGGTATACT Dhaf_0248 279955 - 280854 + | Nitrate reductase gamma subunit Dhaf_0249 280888 - 282501 + | protein of unknown function DUF224 cysteine-rich region domain protein Dhaf_0250 282548 - 284242 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Dhaf_0251 284380 - 284568 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 395 284661 - 284650 - g 73 -3.6 -4.88736 | GATGAGTTAGAAAAA GGAC AATG GCCC AGCTTTGTGACGGAA TERM 396 284706 - 284685 - g 71 -3 -5.00138 | gap 1 GACGGAAATCAAAAA GGCTGCCGT GAAAA ACGA-AGCC TCGAAGGAACTCCTT Dhaf_0252 284608 - 285801 + | sulfite reductase, dissimilatory-type alpha subunit Dhaf_0253 285815 - 286873 + | sulfite reductase, dissimilatory-type beta subunit Dhaf_0254 286917 - 287138 + | hypothetical protein TERM 397 287199 - 287168 - f 100 -23.2 -3.90588 | opp_overlap 287164 287164 287161 CACTGCTCAATGAAA CTCGTTGCAGGAGG TTCT CCTCCTGCAACGAG AAAACTCCTTTTCTA Dhaf_0255 287240 - 287830 + | hypothetical protein Dhaf_0256 287827 - 288828 + | Nitrate reductase gamma subunit Dhaf_0257 288838 - 290466 + | 4Fe-4S ferredoxin, iron-sulfur binding Dhaf_0258 290459 - 290902 + | cytochrome c family protein Dhaf_0259 290899 - 291693 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_0260 291686 - 292837 + | Polysulphide reductase NrfD Dhaf_0261 292884 - 293201 + | sulfur relay protein, TusE/DsrC/DsvC family TERM 398 293261 - 293213 - f 100 -14.4 -3.41002 | opp_overlap 293248, overlap 293214 ATAATACTGAACCAA CCCGCCCCAGGCCACCTGCCTC TATAG GAGGCGGGTGCCACAGGGCGGC TAAGCCCAGTCGCGT TERM 399 293260 - 293214 - f 100 -17.9 -2.63878 | opp_overlap 293248, overlap 293213 TAATACTGAACCAAC CCGCCCCAGGCCACCTGCCTC TATAG GAGGCGGGTGCCACAGGGCGG CTAAGCCCAGTCGCG Dhaf_0262 293341 - 294810 + | cobyrinic acid a,c-diamide synthase TERM 400 294888 - 294857 - f 84 -11 -3.61244 | opp_overlap 294857 294859, overlap 294853 TAGTCTAGAAATGAA GAGCCATCTCTT TGTTACGG AAGAGATGGCCC TTTTTGGTAAATCGT TERM 401 294857 - 294888 + F 100 -9.5 -4.75372 | opp_overlap 294857 294853, overlap 294859 TAGTCTAGAAATGAA GAGCCATCTCTTT GTTACG GAAGAGATGGCCC TTTTTGGTAAATCGT TERM 402 294859 - 294886 + F 76 -10.7 -2.66218 | opp_overlap 294857 294853, overlap 294857 GTCTAGAAATGAAGA GCCATCTCTTT GTTACG GAAGAGATGGC CCTTTTTGGTAAATC Dhaf_0263 295009 - 295977 + | transcriptional regulator, LysR family Dhaf_0264 296025 - 296894 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 403 296914 - 296964 + T 100 -15 -5.00616 | gap 2, opp_overlap 296917, overlap 296917 GCTGGCTGATATAAT C-AAGGAGCTGCGGAGA-GAGAAC CTTAA GTTCACCTTTCCGCAGCTCCTTCG TTTTTTGGACCGGAA TERM 404 296917 - 296960 + T 100 -16.9 -3.93166 | gap 1, opp_overlap 296917, overlap 296914 GGCTGATATAATCAA GGAGCTGCGGAGA-GAGAAC CTTAA GTTCACCTTTCCGCAGCTCC TTCGTTTTTTGGACC TERM 405 296960 - 296917 - T 100 -17.6 -3.49618 | gap 1, opp_overlap 296917 296914 GGCTGATATAATCAA GGAGCTGCGGAGAGA-GAACC TTA AGTTCACCTTTCCGCAGCTCC TTCGTTTTTTGGACC Dhaf_0265 297131 - 296988 - | hypothetical protein TERM 406 297088 - 297117 + g 81 -3.5 -5.41143 | overlap 297092 TTCTGAGCAGGTTTC GTATCCGGGTTAG CCGG TTTATCCGGAAAC TTTTTTTCCACCATA Dhaf_0266 297371 - 297835 + | ATP-cone domain protein TERM 407 299900 - 299914 + G 70 -10 -3.16151 | overlap 299898 299896 GGGATCAACGCTTTT GATGCC AAT GGCATC TATGTTCATAATTGC TERM 408 300017 - 300007 - g 70 -2.4 -4.87665 | GGTTACTGAGAAAAA CGGC AAA GTCG TAGTGGACTGGGAGC TERM 409 300853 - 300841 - g 71 -4.8 -4.65747 | GAAGGCTGAAGAAAA GGCT GAGGA AGCC AAGACACAAGTATCC Dhaf_0267 297980 - 301441 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 410 301453 - 301506 + F 100 -21.5 -2.80879 | opp_overlap 301463, overlap 301463 GTAATGATTGCTTAG TTATAGAAAAGGAGCCATGGGAAAT CTGA ATTTCCTATGGCTCCTTTTTTGTAG GTTATTCAGGTTCAT TERM 411 301463 - 301496 + F 100 -19.1 -5.3236 | opp_overlap 301463, overlap 301453 CTTAGTTATAGAAAA GGAGCCATGGGAAAT CTGA ATTTCCTATGGCTCC TTTTTTGTAGGTTAT TERM 412 301496 - 301463 - f 100 -16.9 -4.55287 | opp_overlap 301463 301453 CTTAGTTATAGAAAA GGAGCCATGGGAAAT CTGA ATTTCCTATGGCTCC TTTTTTGTAGGTTAT Dhaf_0268 301676 - 303172 + | L-lactate permease TERM 413 303220 - 303180 - T 100 -18.3 -4.55798 | opp_overlap 303195 TATTGTAAAGGAAAA GGGCATACCCATCTTGTGC ATA GCACTTGTTGGGTATGCCC TTCCACTAGGACCAT Dhaf_0269 303611 - 303255 - | hypothetical protein TERM 414 303476 - 303505 + g 75 -11.5 -2.70932 | GCAGCAACTCATATT TCTCAGCGGGATC CCAG GATTTCGCTGGGA TGCTTACGGCGAAGG Dhaf_0270 304598 - 303717 - | protein of unknown function DUF6 transmembrane TERM 415 304393 - 304362 - G 73 -5.2 -4.55295 | gap 1, overlap 304364 TGCTTCATAAAGAAA CATCCAGC-TGGC ACCCATG GCCACGCCGGATA GGCTCAGATAGAGAA Dhaf_0271 305994 - 304717 - | beta-lactamase domain protein TERM 416 304902 - 304952 + g 74 -2.9 -5.09426 | gap 5, overlap 304902 CCTGGTCAGCCAAGG CC-TGGC-C-GATGG-CGGA-TAGAA CCGT TTCTGCTCCGCCCATCAGAGCCACGG TTTTTTGGGCTTGAA Dhaf_0272 306238 - 307230 + | glycosyl transferase family 4 TERM 417 307242 - 307281 + T 100 -9.3 -5.30155 | opp_overlap 307240 307238 TTGAGCAAAATCAGG GCAGCTGCGCAATGAAC GGCAAA GTTCATCAGGCAGCTGC TTTTTTCATTCATAA TERM 418 307317 - 307338 + T 95 -13 -3.19371 | opp_overlap 307317 TAATTCAATCAAAAA CTGCGGGC CGGAGA GCCCGCAG TTAAGTTAAATCCGT TERM 419 307338 - 307317 - T 100 -13.7 -4.90013 | opp_overlap 307317 TAATTCAATCAAAAA CTGCGGGCC GGAG AGCCCGCAG TTAAGTTAAATCCGT Dhaf_0273 308249 - 307344 - | hypothetical protein TERM 420 307629 - 307643 + g 93 -12.8 -3.88498 | opp_overlap 307617, overlap 307639 307640 AATCTGAGTGACCTC GGCGGG TTC CCCGCC TTTAGTCTCTACAGG TERM 421 308320 - 308332 + H 74 -7.7 -4.0498 | overlap 308328 AGTAAATCCTTTTCC CTTGC TTG GCAAG TTCTTGCTTTTTATG TERM 422 308328 - 308339 + H 71 -4.4 -4.87665 | overlap 308320 CTTTTCCCTTGCTTG GCAA GTTC TTGC TTTTTATGGATAGCA TERM 423 308734 - 308723 - g 70 -2.2 -4.84529 | GCAGAAACGCAAAAA CCAA ATCC TCGG GCAGATGATCAGGGA Dhaf_0274 308451 - 308876 + | transcriptional regulator, GntR family Dhaf_0275 308873 - 309787 + | ABC transporter related TERM 424 310463 - 310473 + G 73 -4.6 -4.80853 | TGTCCTGAAAGTATT CTGC ACA GCGG TTCTTTTTTTCGGGT Dhaf_0276 309765 - 310529 + | hypothetical protein TERM 425 310602 - 310622 + G 76 -8.9 -3.91897 | overlap 310603 TTCTGGCTAAATTTG TGCGGCCCA GGC TGCGCCGCG TTTATCGCTGGAAGA TERM 426 310603 - 310621 + G 72 -10.2 -2.94924 | overlap 310602 TCTGGCTAAATTTGT GCGGCCCA GGC TGCGCCGC GTTTATCGCTGGAAG Dhaf_0277 310526 - 311281 + | hypothetical protein Dhaf_0278 311533 - 311291 - | hypothetical protein TERM 427 311419 - 311403 - G 81 -8 -4.5442 | opp_overlap 311418 TCTTTAATGATAAAA TCCAGC ATGAG GCTGGA AGCCAAAGCTCCTAT TERM 428 311467 - 311485 + g 73 -5.3 -4.54753 | gap 1, overlap 311468 311475 GCAGAAAGTATCTTT G-GATGGC GGAA GCCATCTC TTCTTTTTGCTCTTT TERM 429 311468 - 311483 + g 76 -9 -3.8493 | overlap 311467 311475 CAGAAAGTATCTTTG GATGGC GGAA GCCATC TCTTCTTTTTGCTCT TERM 430 311475 - 311488 + g 70 -2.4 -4.946 | overlap 311468 311467 TATCTTTGGATGGCG GAAG CCATCT CTTC TTTTTGCTCTTTGCT Dhaf_0279 312438 - 311530 - | hypothetical protein TERM 431 312044 - 312060 + g 87 -6.5 -5.11063 | overlap 312046 CCTAAGGGCTGTATT CCCTTGC TCT GCAAGAG TTTTTGTTGGATGGT TERM 432 312467 - 312485 + H 78 -7.4 -4.46212 | TCGCTTCAATGTGGT GACAGTCC ACA GTACTGTC TTTTATCATAGCAAG Dhaf_0280 312573 - 312866 + | hypothetical protein Dhaf_0281 313031 - 313330 + | hypothetical protein TERM 433 313395 - 313420 + F 100 -15.5 -4.43501 | opp_overlap 313392 CAGTTTTGAAGATTT GCCGCAGGATT TTGA AGTCCTGCGGC TTTTCTACCTGCGTT Dhaf_0282 313511 - 314602 + | beta-lactamase TERM 434 314610 - 314630 + F 100 -14.1 -5.60864 | opp_overlap 314607 CAGACTAATGGAGCG TGTGTCCCA AGT TGGGACACA TTTTTTTGATGTATC Dhaf_0283 314828 - 316453 + | methyl-accepting chemotaxis sensory transducer TERM 435 316514 - 316457 - f 100 -13.7 -5.20783 | gap 1, opp_overlap 316462 316467, overlap 316458 316459 316467 ACCCAAAGATAAAAA GGGAAGATAATGAAGGAGTGAGCCATCT AAA AG-TGGGTCACTCCTTCATTGTCTTCTG GAGGCTTTTTTAAAG TERM 436 316513 - 316458 - f 100 -17.2 -3.70843 | gap 1, opp_overlap 316462 316467, overlap 316457 316459 316467 CCCAAAGATAAAAAG GGAAGATAATGAAGGAGTGAGCCATCT AAA AG-TGGGTCACTCCTTCATTGTCTTCT GGAGGCTTTTTTAAA TERM 437 316512 - 316459 - f 100 -20.7 -2.81421 | gap 1, opp_overlap 316462 316467, overlap 316458 316457 316467 CCAAAGATAAAAAGG GAAGATAATGAAGGAGTGAGCCATCT AAA AG-TGGGTCACTCCTTCATTGTCTTC TGGAGGCTTTTTTAA TERM 438 316462 - 316509 + F 100 -18.8 -3.3341 | gap 1, opp_overlap 316459 316458 316457 316467, overlap 316467 AAGATAAAAAGGGAA GATAATGAAGGAGTGAGCCATCT AAA AG-TGGGTCACTCCTTCATTGTC TTCTGGAGGCTTTTT TERM 439 316504 - 316467 - f 100 -15.1 -3.76383 | gap 1, opp_overlap 316462 316467, overlap 316459 316458 316457 AAAAAGGGAAGATAA TGAAGGAGTGAGCCATCT AAA AG-TGGGTCACTCCTTCA TTGTCTTCTGGAGGC TERM 440 316467 - 316504 + F 100 -15.1 -3.7511 | gap 1, opp_overlap 316467 316459 316458 316457, overlap 316462 AAAAAGGGAAGATAA TGAAGGAGTGAGCCATCT AAA AG-TGGGTCACTCCTTCA TTGTCTTCTGGAGGC Dhaf_0284 316583 - 317584 + | Acetyl xylan esterase Dhaf_0285 317822 - 318094 + | response regulator receiver protein TERM 441 318136 - 318168 + F 100 -12.8 -4.66163 | opp_overlap 318136 CTGGCGTGAAAAAAA CACCGATGCTGCCT TTTAC AGGTGGTATCGGTG TTTTTCAATGAGAGT TERM 442 318168 - 318136 - f 89 -6.2 -5.40072 | opp_overlap 318136 CTGGCGTGAAAAAAA CACCGATGCTGCCT TTTAC AGGTGGTATCGGTG TTTTTCAATGAGAGT TERM 443 318391 - 318375 - g 78 -7.9 -4.45664 | opp_overlap 318390 CGAACTGAAGGAAAA GGGTCTG GCC CTGACCC AACAATTGGATTCTA Dhaf_0286 318166 - 319914 + | histidine kinase TERM 444 320214 - 320233 + G 73 -7.2 -4.19238 | TATCTTGTTAAGCCC TTCAGTTC CATG GAACTGGA TTTTCGGATTAAGGC Dhaf_0287 319911 - 320600 + | two component transcriptional regulator, winged helix family TERM 445 320678 - 320646 - T 100 -14.9 -4.78237 | opp_overlap 320646 TAGTTGATAACAAAA GGAACTGTCCTGGCT GAG AGGCCGGACAGTTCC TTCTTTTGGTGCGCC TERM 446 320646 - 320678 + T 100 -15 -4.25256 | gap 1, opp_overlap 320646 TAGTTGATAACAAAA GGAACTGTCCTGGCT GAGA GGCC-GGACAGTTCC TTCTTTTGGTGCGCC Dhaf_0288 321519 - 320722 - | hypothetical protein Dhaf_0289 322114 - 321545 - | dimethylsulfoxide reductase, chain B Dhaf_0290 324487 - 322142 - | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family Dhaf_0291 325125 - 324490 - | cytoplasmic chaperone TorD family protein TERM 447 325286 - 325267 - H 83 -9.4 -4.06678 | ACTTATCCACAGAAA TATCCACA AACC TGTGGATA AAGGGGATAACTTTG TERM 448 325459 - 325496 + H 72 -7.7 -3.78193 | opp_overlap 325462, overlap 325457 325462 325467 325495 ATTTCTGAGCAAGAG AAAGTTAAGCCCTGGGA TTGC TCCCGGGACTTAACTGA TGTTTATCTTTGATC TERM 449 325462 - 325493 + H 100 -13.8 -2.96288 | opp_overlap 325462, overlap 325459 325457 325467 TCTGAGCAAGAGAAA GTTAAGCCCTGGGA TTGC TCCCGGGACTTAAC TGATGTTTATCTTTG TERM 450 325493 - 325462 - H 100 -13.8 -4.23674 | opp_overlap 325462 325459 325457 325467 TCTGAGCAAGAGAAA GTTAAGCCCTGGGA TTGC TCCCGGGACTTAAC TGATGTTTATCTTTG TERM 451 326354 - 326368 + G 73 -3.5 -4.86621 | opp_overlap 326353 326354 TACAGCAATGAAGAG CTGGT AACCC GCCAG TTTTTGCTTCAGGAT TERM 452 327293 - 327303 + G 74 -6.8 -4.46212 | GATAGCGGTTATATG GCCA GAG TGGC TTTTGTCATGGACAA TERM 453 327349 - 327333 - g 80 -5 -5.06816 | overlap 327334 AGCTTTTAAGAAAAA TCGGCC TTTCC GGCCGC AGCATTGTGCCGATG TERM 454 327348 - 327334 - g 71 -8.5 -3.63367 | overlap 327333 GCTTTTAAGAAAAAT CGGCC TTTCC GGCCG CAGCATTGTGCCGAT TERM 455 327358 - 327373 + G 76 -9 -3.80745 | overlap 327370 CGGCCGCAGCATTGT GCCGAT GCTG ATCGGC TTTGGCTGTTCTGTT Dhaf_0292 325811 - 328165 + | ferrous iron transport protein B TERM 456 328297 - 328256 - T 70 -7.9 -3.6216 | opp_overlap 328268, overlap 328247 328257 GAGGAACAAGGATAA CCCTTGCGGGGGCTGCAGT GGAG ACTGCAGTTCCTGCAAGCA TCCCAATCCTCCGGA TERM 457 328296 - 328257 - T 70 -9.2 -2.76573 | opp_overlap 328268, overlap 328247 328256 AGGAACAAGGATAAC CCTTGCGGGGGCTGCAGT GGAG ACTGCAGTTCCTGCAAGC ATCCCAATCCTCCGG TERM 458 328268 - 328285 + T 74 -9.9 -3.14564 | opp_overlap 328257 328256 TAACCCTTGCGGGGG CTGCAGT GGAG ACTGCAG TTCCTGCAAGCATCC TERM 459 328345 - 328335 - T 77 -8.2 -3.96867 | opp_overlap 328335 328335 GAAAAATAAAAGGAA CCCC GGT GGGG GTTTTAAGAATTACT TERM 460 328335 - 328346 + T 73 -7.2 -4.15106 | opp_overlap 328335, overlap 328335 GAAAAATAAAAGGAA CCCC GGTG GGGG TTTTAAGAATTACTC Dhaf_0293 328817 - 328356 - | hypothetical protein Dhaf_0294 329027 - 329950 + | 2-dehydropantoate 2-reductase TERM 461 331391 - 331401 + G 80 -8.2 -4.36914 | CGCAATGGTTTTGAG GCCG ATC CGGC TTTTCTGCAGACCAA TERM 462 331865 - 331849 - g 75 -5.2 -4.7871 | opp_overlap 331849, overlap 331839 331836 AATCAGCACGAAAAA GATCAA GAACG TTGATC TTTCTCTGCCCAAAT Dhaf_0296 330941 - 332212 + | proteinase inhibitor I4 serpin TERM 463 332277 - 332232 - f 100 -15.8 -3.57462 | gap 1, opp_overlap 332232, overlap 332243 GAGTTTAGTTGCAAA TCCCTCTAAAACGTAGATAAG CTGGT CTTATCTGCG-TTTAGAGGGA TTTTTGCATAACAAA TERM 464 332232 - 332277 + F 100 -18 -4.65895 | gap 1, opp_overlap 332232 332243 GAGTTTAGTTGCAAA TCCCTCTAAAACGTAGATAAG CTGGT CTTATCTGCG-TTTAGAGGGA TTTTTGCATAACAAA TERM 465 332267 - 332243 - f 73 -7.2 -4.10453 | opp_overlap 332232, overlap 332232 CAAATCCCTCTAAAA CGTAGATAAG CTGGT CTTATCTGCG TTTAGAGGGATTTTT Dhaf_0297 332379 - 333041 + | transcriptional regulator, GntR family Dhaf_0298 333102 - 333323 + | hypothetical protein TERM 466 333340 - 333382 + F 84 -11.5 -3.16683 | gap 1, opp_overlap 333349, overlap 333349 ATTCCCTATTGGCTC AGCTTAAAACCGAG-GAAGC AGCA GCTTCACTCGGTTTTAAACA TTAATCCCCTGCGCT TERM 467 333349 - 333373 + F 93 -10.8 -4.15106 | gap 1, opp_overlap 333349, overlap 333340 TGGCTCAGCTTAAAA CCGAG-GAAGC AGCA GCTTCACTCGG TTTTAAACATTAATC TERM 468 333373 - 333349 - f 93 -10.8 -4.13767 | gap 1, opp_overlap 333349 333340 TGGCTCAGCTTAAAA CCGAG-GAAGC AGCA GCTTCACTCGG TTTTAAACATTAATC TERM 469 334115 - 334103 - g 71 -4.7 -4.56702 | opp_overlap 334112 TGCCAAGCAAAGAAA GAGCC AGA GGCGC GACCATCATCGATAG Dhaf_0299 333658 - 334986 + | major facilitator superfamily MFS_1 Dhaf_0300 335046 - 335792 + | Asp/Glu/hydantoin racemase TERM 470 335796 - 335837 + F 77 -11 -2.87132 | opp_overlap 335803, overlap 335803 CGCACACGCTGATGT CAGTAAAGGATTCTGGCA TACTTT TGCTGGAATCCTTTGCCG TGTCTGGGGAAGCAC TERM 471 335803 - 335830 + F 73 -8.5 -3.65425 | opp_overlap 335803, overlap 335796 GCTGATGTCAGTAAA GGATTCTGGCA TACTTT TGCTGGAATCC TTTGCCGTGTCTGGG TERM 472 336637 - 336601 - g 74 -3.8 -4.94972 | gap 1 CAGGAGAAGCAAAAA GGTACTAC-TGCCGA TTTAATTT TCGGCATAGAGTACC TGGTAAGCTTTATTT Dhaf_0301 336031 - 336828 + | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase TERM 473 336900 - 336922 + T 100 -12.1 -4.8622 | opp_overlap 336900, overlap 336919 TAGGTGCATGAAAAA GGCGAATTC CTGAA GAATTCGCC TTTTTCATTGGAACA TERM 474 336922 - 336900 - T 100 -12.8 -4.72986 | opp_overlap 336900 336919 TAGGTGCATGAAAAA GGCGAATTCC TGA AGAATTCGCC TTTTTCATTGGAACA Dhaf_0302 337695 - 336943 - | Asp/Glu/hydantoin racemase TERM 475 337634 - 337660 + g 77 -6.7 -4.63218 | gap 1, opp_overlap 337639 TCCAGGGCTGTGTTG GAAGA-TGGGGT CAGC ATCCCAATCTTC TTTTGTTCCGCAGGA Dhaf_0303 338548 - 337862 - | transcriptional regulator, Crp/Fnr family TERM 476 338677 - 338627 - R 71 -3.3 -5.0133 | gap 1, opp_overlap 338634, overlap 338629 338633 338634 GATTTTCTGAAAAAA TATAAAGGGAGGAGAGTTCCGGGA TTTG CCCCGAAGCTATCCTCC-TTTAGG CTTCTGGTTTTATAA TERM 477 338675 - 338629 - R 91 -10.3 -4.13561 | gap 1, opp_overlap 338634, overlap 338627 338633 338634 TTTTCTGAAAAAATA TAAAGGGAGGAGAGTTCCGGGA TTTG CCCCGAAGCTATCCTCC-TTTA GGCTTCTGGTTTTAT TERM 478 338672 - 338633 - R 100 -9.2 -4.64992 | opp_overlap 338634, overlap 338629 338627 338634 CTGAAAAAATATAAA GGGAGGAGAGTTCCGGGA TTTG CCCCGAAGCTATCCTCCT TTAGGCTTCTGGTTT TERM 479 338671 - 338634 - R 95 -12.7 -3.37368 | opp_overlap 338634, overlap 338633 338629 338627 TGAAAAAATATAAAG GGAGGAGAGTTCCGGGA TTTG CCCCGAAGCTATCCTCC TTTAGGCTTCTGGTT TERM 480 338634 - 338671 + r 93 -12 -3.70469 | opp_overlap 338633 338629 338627 338634 TGAAAAAATATAAAG GGAGGAGAGTTCCGGG ATTTGC CCCGAAGCTATCCTCC TTTAGGCTTCTGGTT Dhaf_0304 339777 - 338707 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Dhaf_0305 341426 - 340158 - | major facilitator superfamily MFS_1 TERM 481 340739 - 340723 - G 73 -2.2 -5.16133 | AGGAGAACATAAAAA GCGG AAGATTTAA CCGC CACCGAGACCGGCAC TERM 482 341091 - 341079 - G 87 -5.5 -5.46276 | AATATATAGAAAAAA CGCCT GTG AGACG CCAAGAAAAACTGCC TERM 483 343496 - 343472 - g 77 -4.9 -4.9725 | ATTCTTAGATAAAAA GGTCAGAGAAG TGG CTCCTGAGACC ATGGCTTTTTTAATT Dhaf_0306 341841 - 343814 + | sigma54 specific transcriptional regulator, Fis family TERM 484 343885 - 343854 - T 100 -10.3 -4.46112 | gap 2, opp_overlap 343854 CGTGATTGAAATAAA GCATCCCAGGAGCCC CGCA GGG-TC-TGGGATGC TTTTAACGTCAGGAA TERM 485 343854 - 343885 + T 91 -10.3 -4.13767 | gap 2, opp_overlap 343854 CGTGATTGAAATAAA GCATCCCAGGAGCCC CGCA GGG-TC-TGGGATGC TTTTAACGTCAGGAA Dhaf_0307 345129 - 343909 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 486 345252 - 345281 + H 100 -9.4 -4.6856 | overlap 345278 ATAAGCAATTACCAT GCCAAAGTCC CAGCGGTTAA GGACTTTGGC TTTTTGCCGTGTTTA Dhaf_0308 345822 - 347102 + | major facilitator superfamily MFS_1 Dhaf_0309 347126 - 348193 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 487 348646 - 348635 - g 80 -7.2 -4.52345 | opp_overlap 348635 348634 348643 ATATTACCAAAGAAA CCGG CAGC CCGG CTTTCCTGCTGGCTA Dhaf_0310 348289 - 349440 + | acyl-CoA dehydrogenase domain protein Dhaf_0311 349483 - 350253 + | Electron transfer flavoprotein alpha/beta-subunit TERM 488 350556 - 350513 - g 80 -8.9 -4.26903 | gap 2, opp_overlap 350539 350540, overlap 350520 TTGAGCCTACCAAAA GATGCAAGCTCATGGCGGGCA GACT TGCC-GCCATG-GCAGGCACC AGTGTCATGACGGAT TERM 489 350798 - 350788 - g 85 -5.4 -5.18355 | GCGAAAAAGGAAAAA TCCA GCG TGGA TCTGGCCAGTGCGAA Dhaf_0312 350272 - 351165 + | Electron transfer flavoprotein alpha subunit TERM 490 351223 - 351172 - f 100 -8.8 -5.04868 | gap 1, opp_overlap 351183 351187 351217, overlap 351173 351174 TTAAAGTAAAGAAAA GCTGCCTGGGACGAGGGGGAAATAT AAG ATATTTCCCCTTCGTTCCTA-CACC AGAGGAGGAGTTATA TERM 491 351221 - 351174 - f 72 -10 -2.75149 | gap 1, opp_overlap 351183 351187 351217, overlap 351172 351173 AAAGTAAAGAAAAGC TGCCTGGGACGAGGGGGAAATAT AAG ATATTTCCCCTTCGTTCCTA-CA CCAGAGGAGGAGTTA TERM 492 351183 - 351213 + F 100 -17.8 -3.14132 | opp_overlap 351174 351172 351173, overlap 351187 AAAAGCTGCCTGGGA CGAGGGGGAAATAT AAG ATATTTCCCCTTCG TTCCTACACCAGAGG TERM 493 351187 - 351209 + F 100 -13.6 -3.39895 | opp_overlap 351174 351172 351173, overlap 351183 GCTGCCTGGGACGAG GGGGAAATAT AAG ATATTTCCCC TTCGTTCCTACACCA TERM 494 351553 - 351566 + G 71 -4.5 -4.58395 | CCGTGATTCCTATTC CGTCT TAAG AGGCG TTTTTGACCAGTGGC TERM 495 352350 - 352370 + G 75 -5.3 -4.76041 | opp_overlap 352340 352335 352333 352331 GGAATTTTCCTCATT TCCTTGAGG AAA CCCCCAGGA TTTTTGATGGCTATC Dhaf_0313 351242 - 352534 + | Electron-transferring-flavoprotein dehydrogenase TERM 496 352793 - 352780 - g 80 -4.5 -5.01497 | overlap 352766 352781 352782 ACCATTATAGAAAAA TGGGA GCTT CCCCA GGGAACGCTGGGGAT Dhaf_0314 352531 - 352827 + | putative ferredoxin TERM 497 353318 - 353299 - g 100 -11.4 -5.44119 | CTTAGGGGAAAAAAA CCGAGAGC AAAA GCTCCCGG GAAAAAGGCAAGACG Dhaf_0315 352853 - 354385 + | AMP-dependent synthetase and ligase Dhaf_0316 354416 - 355054 + | NADPH-dependent FMN reductase TERM 498 355089 - 355127 + F 100 -14.7 -3.31515 | opp_overlap 355089 355092, overlap 355092 TTGGATATAGAGTAA GAATACCCGTCATGGTT CACAA GGCCCTGACGGGTATTC TTATAGAAGCTCTTT TERM 499 355127 - 355089 - f 100 -13.3 -3.35197 | opp_overlap 355089 355092, overlap 355092 TTGGATATAGAGTAA GAATACCCGTCATGG TTCACAAGG CCCTGACGGGTATTC TTATAGAAGCTCTTT TERM 500 355092 - 355124 + F 86 -10.6 -3.7941 | opp_overlap 355089 355092, overlap 355089 GATATAGAGTAAGAA TACCCGTCATGGTT CACAA GGCCCTGACGGGTA TTCTTATAGAAGCTC TERM 501 355124 - 355092 - f 81 -9.2 -3.81089 | opp_overlap 355092 355089, overlap 355089 GATATAGAGTAAGAA TACCCGTCATGG TTCACAAGG CCCTGACGGGTA TTCTTATAGAAGCTC TERM 502 355400 - 355412 + F 91 -7.7 -4.89852 | AGAAAGTGAGGTTGA GACGT ATG ACGTC TTTTTATGAATATAC Dhaf_0317 355405 - 355845 + | transcriptional regulator, MarR family Dhaf_0318 356030 - 356554 + | GCN5-related N-acetyltransferase TERM 503 357676 - 357664 - g 74 -2.7 -5.15969 | GCTGAACTGAAAAAA CATCT TAA AAATG AAAACGCCGCTTGCG TERM 504 357694 - 357681 - g 100 -9.5 -4.77757 | TCTTAAAAATGAAAA CGCCG CTTG CGGCG TCAGCAAAACCTTTC TERM 505 357927 - 357915 - g 70 -7.7 -3.85864 | overlap 357917 357920 TGATCAGCAGAATAA CAGCA GCT TGCTG CAAACCCTGAAGGTT Dhaf_0319 356584 - 358140 + | transcriptional regulator, CdaR Dhaf_0320 358283 - 359692 + | glycine cleavage T protein (aminomethyl transferase) TERM 506 359713 - 359734 + F 100 -13.7 -4.68593 | GGCAAATTATTTGAA CCCGGTTCC GAAT GGGACCGGG TTTTTGCGTCATCAG Dhaf_0321 359919 - 360458 + | Formiminotransferase-cyclodeaminase TERM 507 360498 - 360519 + F 77 -3.6 -5.19328 | AAACGATGACTTAAA GCGCTTAC GATGGA GGAGGCGC TTTTTCTTGTACCGT Dhaf_0322 360617 - 360928 + | transcriptional regulator, AbrB family Dhaf_0323 360918 - 361202 + | cytotoxic translational repressor TERM 508 361294 - 361271 - f 71 -8.3 -3.53811 | opp_overlap 361276 GTGATTGTTGCTAAA CTATAGTCA GGTACT TGACTATAG TAACTCGAAATAAAA Dhaf_0324 361331 - 361942 + | transcriptional regulator, MarR family Dhaf_0325 361949 - 362098 + | hypothetical protein TERM 509 362249 - 362205 - T 70 -8 -3.5764 | gap 1, opp_overlap 362205 AAGCTTATTTTCAAA TCCCTCACTAC-TGGATAAAC GGGT GTTTATCTATGTTGGGAGGGA TTTTTTTGTTCATTT TERM 510 362205 - 362249 + T 100 -10.2 -5.9003 | gap 1, opp_overlap 362205 AAGCTTATTTTCAAA TCCCTCACTAC-TGGATAAAC GGGT GTTTATCTATGTTGGGAGGGA TTTTTTTGTTCATTT Dhaf_0326 362617 - 362384 - | protein of unknown function DUF1659 TERM 511 362926 - 362915 - g 71 -4.4 -4.7339 | overlap 362917 AACAAAGTGGAAAAA TGCT GCTC AGCA ATGCCATAGAGATCG TERM 512 363105 - 363122 + G 74 -9.9 -3.59979 | opp_overlap 363105 GGAAGAGGGCTCAAA TGGTGCA CCGG TGCACCA TTTGAACTACACCCA TERM 513 363122 - 363105 - g 74 -9.9 -3.57615 | opp_overlap 363105 GGAAGAGGGCTCAAA TGGTGCA CCGG TGCACCA TTTGAACTACACCCA TERM 514 363285 - 363271 - g 71 -7 -3.99374 | GCTGAGGAAGAAGAA CGCCGG GAA CCGGAG AATCAAGGGGTGCAA Dhaf_0327 362836 - 363675 + | hypothetical protein TERM 515 363706 - 363681 - T 86 -9 -4.39386 | opp_overlap 363664, overlap 363683 GCCAAATTAGTAAAA TAGGCGCTGT GTGAAA ACAGCGCCTG TGAGCATATGCGTCT TERM 516 363704 - 363683 - T 95 -11.6 -3.79533 | opp_overlap 363664, overlap 363681 CAAATTAGTAAAATA GGCGCTGT GTGAAA ACAGCGCC TGTGAGCATATGCGT Dhaf_0328 364482 - 363868 - | ABC transporter related Dhaf_0329 365366 - 364503 - | binding-protein-dependent transport systems inner membrane component Dhaf_0330 366342 - 365359 - | binding-protein-dependent transport systems inner membrane component TERM 517 365487 - 365458 - G 78 -12.1 -2.60508 | overlap 365457 365455 CAATGCACAGAAGAT GGCGATACCCAGC AGCA GCGGGACATCGCC GTTGAGGGCGGCGGC Dhaf_0331 368019 - 366391 - | extracellular solute-binding protein family 5 TERM 518 367149 - 367159 + g 83 -6.8 -4.85267 | CTACCTTGATCTCCT TCCC ATC GGGA TTTTTCATGGTTTGT TERM 519 368267 - 368304 + H 85 -4.2 -5.55769 | gap 1, opp_overlap 368257 AAATGCATGAGCAAG GCCATGGAG-GTCTG CCTGATTTA CGGGCACTCTATGGC TTTTTTATTGTGGAC Dhaf_0332 368378 - 368758 + | Protein of unknown function CGGC region TERM 520 368847 - 368883 + F 95 -3 -6.04324 | gap 1 TAAGATTTAATTAAA CCATGGAGGTTTAGCCC AAAA GGGGTTAA-CTCTGTGG TTTTTTATTTTTTCG Dhaf_0333 368949 - 369242 + | protein of unknown function DUF156 TERM 521 369561 - 369548 - g 73 -2.3 -5.0133 | overlap 369549 GAGCTGTCCAAAAAA TGGAG CGAC CTCCT CATCGGCAATGCGCC TERM 522 369734 - 369762 + G 75 -7.6 -4.26076 | gap 1 GGGATTGACGCAGAG TTCAGTGTAATGG ACAG CCATT-CACTGGA TTTTCCTGACAATAC Dhaf_0334 369443 - 370216 + | Methyltransferase type 11 TERM 523 370612 - 370593 - g 77 -6.4 -4.58283 | gap 1, opp_overlap 370604 370607 GAACGCGCTCAAAAA CAGCCTGCT GTT AGC-GGCCG TCAGTCTGGCTGCCG Dhaf_0335 370282 - 371241 + | binding-protein-dependent transport systems inner membrane component Dhaf_0336 371241 - 372083 + | binding-protein-dependent transport systems inner membrane component Dhaf_0337 372107 - 373672 + | extracellular solute-binding protein family 5 TERM 524 374300 - 374284 - g 75 -3.7 -5.1287 | GGTACACTGAAAAAA CTGCA GGAAAAT TGCAG CGCCGCTATGCTTCT TERM 525 374484 - 374472 - g 79 -3.3 -5.27335 | overlap 374473 GGTTTTAAACAAAAA GGGCA GGC TGCCA ATGGGCCCGACGATT Dhaf_0338 373708 - 374649 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Dhaf_0339 374639 - 375592 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 526 375695 - 375724 + G 83 -8.5 -4.57073 | overlap 375688 375698 CCTATATCGGACAGG CACTGGCCATGGC CAAA GCCGTGTCCATTG TTTTTGCGCGCAGTG TERM 527 375698 - 375721 + G 80 -8.8 -4.40561 | overlap 375688 375695 ATATCGGACAGGCAC TGGCCATGGC CAAA GCCGTGTCCA TTGTTTTTGCGCGCA TERM 528 376493 - 376513 + G 80 -7.5 -4.63527 | ACAACAGCTTTCTGG GCTTGTCCG TGG CGGAGGAGC TTTTTGAAATCGTGG Dhaf_0340 375589 - 377331 + | ABC transporter related Dhaf_0341 377324 - 379102 + | ABC transporter related TERM 529 379443 - 379467 + G 71 -9.4 -3.57271 | gap 1, opp_overlap 379448, overlap 379441 ATGCAGATGGACGCG CAGAA-CCTGG CGTT CCAGGATTCTG TATTTGATATTGTGA TERM 530 379725 - 379750 + G 72 -6.1 -4.38712 | gap 1, overlap 379720 AGGGAGCTGCCCCTT TCCGGCTGCTGG CGG CC-GCAGTGGGA TTTTATGACCCTCGC Dhaf_0342 379131 - 379889 + | Methyltransferase type 11 TERM 531 380010 - 380058 + F 71 -6.8 -4.20354 | gap 1, opp_overlap 380010 380038, overlap 380008 TCATAGTATAACGAA GACCATGGAG-GTCTGTTTAC CCTAACTA GAGGGCGGACACTCCATGGTC TTTTGGCATTGCATT TERM 532 380153 - 380195 + F 85 -7.3 -4.77775 | gap 1 TACCTTCTCTTCTTG CTCATTTT-TTGGTCCCA TTTGGGTC TGGGATCAATAAAATGGG TTTCTTTTCTAAACT TERM 533 380412 - 380402 - f 75 -8.2 -3.81349 | opp_overlap 380402 380401, overlap 380400 ATTGGAAAAATAATA CCCC TGG GGGG CTTGTAGGATAAGAG TERM 534 380511 - 380557 + F 84 -6.1 -5.00846 | gap 2, opp_overlap 380493 380511, overlap 380525 TCATAGTGTAACGAA GACCATGGAGGTCTTTTTCCCTA ATA TAGGGA-GGATACTT-CATGGTC TTTTTGTAATATTTA TERM 535 380663 - 380702 + F 82 -3.2 -5.4505 | gap 1 ACCTTCTCTTCCTTG CTCAT-TATTGATCTTT TTGGGTC AGAGATTAATAAATGAG TTTTTTCTTAAACAA TERM 536 381750 - 381739 - gf 70 -7.2 -3.77831 | CGACCAATATTGAAA CGGC AATT GCCG ATGCCTACTATGCGG Dhaf_0343 380790 - 381911 + | periplasmic binding protein TERM 537 382698 - 382734 + GF 76 -9.4 -3.45592 | overlap 382697 GCTGATTATAGTCAG TATGGTGCTGGCTGCC CTGCT GGCGGCCAGTGCGGTA TCTTTCGTGGGCATT Dhaf_0344 381886 - 382977 + | transport system permease protein Dhaf_0345 382980 - 383759 + | ABC transporter related Dhaf_0346 383817 - 384341 + | formylmethanofuran dehydrogenase subunit E region TERM 538 384577 - 384591 + F 78 -9.2 -3.58801 | overlap 384588 384589 CTGAAGGATTGGGGA GGGGGG AGA CCCTCC TTTAGGGGATTATGT TERM 539 384901 - 384887 - g 74 -6.4 -4.38843 | GAAAATATCAAGAAA GAAGGT GTT ACCCTC TATGAGCGAACCCTA Dhaf_0347 384614 - 384922 + | DNA polymerase beta domain protein region Dhaf_0348 384903 - 385301 + | nucleotidyltransferase substrate binding protein, HI0074 family TERM 540 385392 - 385353 - T 100 -14.3 -4.3534 | opp_overlap 385353, overlap 385355 TCGTAAGTACGAAAA GGCCCCTTGCCAGGGAA AATGAG TTCACCGGCAAGGGGTC TTTTTAGCTTATAGA TERM 541 385353 - 385392 + T 100 -14.3 -4.78149 | opp_overlap 385353 385355 TCGTAAGTACGAAAA GGCCCCTTGCCAGGGAA AATGAG TTCACCGGCAAGGGGTC TTTTTAGCTTATAGA TERM 542 385390 - 385355 - T 100 -15.5 -2.51951 | opp_overlap 385353, overlap 385353 GTAAGTACGAAAAGG CCCCTTGCCAGGGAA AATGAG TTCACCGGCAAGGGG TCTTTTTAGCTTATA Dhaf_0349 385628 - 385431 - | hypothetical protein TERM 543 385669 - 385682 + r 73 -5.3 -4.65895 | opp_overlap 385660 385662, overlap 385660 ATAGCACAGCCTGGC GGTTT AGCC AAACC TTTTTCAATGAGCAC Dhaf_0350 386242 - 385730 - | anaerobic ribonucleoside-triphosphate reductase activating protein Dhaf_0351 388611 - 386242 - | anaerobic ribonucleoside-triphosphate reductase TERM 544 387458 - 387481 + g 91 -9.6 -4.57073 | gap 1 TCGCCGTTGCCCAGA CCTGCTTC-GG TGG CCAGGAGCAGG TTTTTGACCACCATA TERM 545 388115 - 388103 - G 74 -6.3 -4.38712 | opp_overlap 388103, overlap 388105 GTGAGGGTGAGAAAA TCCAT ATC ATGGA TGTGAATATCTCCTT TERM 546 388542 - 388553 + g 77 -4.4 -5.1615 | opp_overlap 388542 TGGCTGCCTTAAAGA TAGC GTTG GCTA TTTTTTCAATGTTAA TERM 547 388709 - 388686 - R 100 -9.6 -5.28942 | CATCCGAAACAAAAA CTTCCCGACA GAGA TGCCGAGAAG CTAAAAACAACATGC Dhaf_0352 392384 - 389157 - | carbamoyl-phosphate synthase, large subunit TERM 548 389798 - 389842 + g 73 -7.7 -4.07568 | opp_overlap 389808, overlap 389799 389807 GCCCGGTATAATCAG CCAGTATCAACTCCGTGGCCA GCC TGGCCATGGGGGTGTTGCAGA TTTTGGAGACCAGGG TERM 549 389799 - 389841 + g 74 -11.2 -3.04398 | opp_overlap 389808, overlap 389798 389807 CCCGGTATAATCAGC CAGTATCAACTCCGTGGCCA GCC TGGCCATGGGGGTGTTGCAG ATTTTGGAGACCAGG TERM 550 389807 - 389833 + g 74 -10.8 -3.09518 | opp_overlap 389808, overlap 389799 389798 AATCAGCCAGTATCA ACTCCGTGGCCA GCC TGGCCATGGGGG TGTTGCAGATTTTGG TERM 551 389832 - 389808 - G 70 -9.9 -3.22476 | opp_overlap 389807 389799 389798 ATCAGCCAGTATCAA CTCCGTGGCCA GCC TGGCCATGGGG GTGTTGCAGATTTTG TERM 552 390497 - 390509 + g 72 -6.2 -4.4831 | overlap 390496 CGAATTGGACGATGG CGCC GATGG GGCG TTCTTTTTCATAGAT Dhaf_0353 392660 - 393658 + | helix-turn-helix domain-containing protein Dhaf_0354 394425 - 393706 - | protein of unknown function DUF81 TERM 553 394577 - 394542 - R 100 -9.8 -4.66609 | gap 1, opp_overlap 394541 394543, overlap 394543 GACGGTATGCAAAAA GGGGGCGTGT-GGAA AGCTTGG TTCCGACACGCCCCT CCTTTATGCGGCGAA TERM 554 394576 - 394543 - R 100 -13.3 -3.39483 | gap 1, opp_overlap 394541 394543, overlap 394542 ACGGTATGCAAAAAG GGGGCGTGT-GGAA AGCTTGG TTCCGACACGCCCC TCCTTTATGCGGCGA TERM 555 394543 - 394576 + r 100 -13.3 -3.00946 | gap 1, opp_overlap 394543 394542, overlap 394541 ACGGTATGCAAAAAG GGGGCGTGT-GGAA AGCTTGG TTCCGACACGCCCC TCCTTTATGCGGCGA Dhaf_0355 395314 - 394658 - | Propanediol utilization protein TERM 556 394803 - 394838 + g 75 -10.4 -3.40597 | gap 1, opp_overlap 394799 394800, overlap 394801 CTGAAGACTAATCCC CGGGGGCCAGGTGCAGT GAC GCTG-ACCCGGTCCCTG TCTTTGACTCCGAAA Dhaf_0356 396831 - 395344 - | acetaldehyde dehydrogenase (acetylating) TERM 557 396328 - 396342 + g 71 -9.2 -3.53224 | opp_overlap 396324 GCAGGAGCAGACCCC GTCGGG AGC CCCGGC TTTGACGGCAGCCTC Dhaf_0357 397141 - 396851 - | microcompartments protein Dhaf_0358 397448 - 397170 - | microcompartments protein Dhaf_0359 398123 - 397506 - | ethanolamine utilisation EutQ family protein Dhaf_0360 398717 - 398172 - | microcompartments protein Dhaf_0361 400054 - 398699 - | Respiratory-chain NADH dehydrogenase domain 51 kDa subunit Dhaf_0362 400337 - 400047 - | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TERM 558 400403 - 400384 - R 74 -6.4 -4.56607 | opp_overlap 400383 400384, overlap 400386 GGATTAAGGATAAAA CAGCTCAA GGGT TTGAGCAG GTTTTGGCTGCTGCT TERM 559 400401 - 400386 - R 72 -7.6 -3.88832 | opp_overlap 400384 400383, overlap 400384 ATTAAGGATAAAACA GCTCAA GGGT TTGAGC AGGTTTTGGCTGCTG Dhaf_0363 401104 - 400388 - | ethanolamine utilization protein EutJ family protein Dhaf_0364 402221 - 401283 - | amidohydrolase 2 Dhaf_0365 402525 - 403919 + | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 560 406061 - 406049 - g 81 -3.3 -5.49569 | opp_overlap 406056 TATGAAGAGAAAAAA CTGAC CAT GGCAG AATTGCTGGAAGCGG TERM 561 406329 - 406313 - g 72 -5.7 -4.42788 | CCCAATGGCAGAAAA GCCTGGA TGC CCCTGGC CGACGGTTCCTCCGC Dhaf_0366 404228 - 406705 + | Formate C-acetyltransferase Dhaf_0367 406768 - 407700 + | glycyl-radical enzyme activating protein family TERM 562 408276 - 408262 - g 73 -7.1 -4.17089 | overlap 408272 TTGAAAGGTTTAAAA GTCCG GACAA CGGAC TCCCCCGTAGAAGTT Dhaf_0368 407722 - 408744 + | TRAP dicarboxylate transporter, DctP subunit TERM 563 408793 - 408764 - f 100 -13.5 -3.59979 | opp_overlap 408764, overlap 408748 CCTGGCTATGGGAAA CAGGGGAGAGGGG TATT CCCCGCTCTCCTG TTTTCACCGGCAGGA TERM 564 408764 - 408793 + F 100 -15.7 -4.07568 | opp_overlap 408748 408764 CCTGGCTATGGGAAA CAGGGGAGAGGGG TATT CCCCGCTCTCCTG TTTTCACCGGCAGGA TERM 565 409500 - 409512 + G 73 -4.8 -4.80396 | opp_overlap 409487 AAGCCCGATGTTCCG GCCA TGGCT TGGC TTTTTGGCTATTTTG TERM 566 409562 - 409572 + G 71 -8.2 -3.71649 | GGTGCCCATTGCCAT GGCC TTA GGCC TTTCCGCTTTAGGGA TERM 567 410222 - 410234 + G 83 -9.1 -4.40804 | CCCTACCGAATCGGC GGCTG TGG CAGCC TTTTATGGACTGATC TERM 568 410421 - 410401 - g 71 -6.8 -4.26344 | AGATTCCCACCAAAA TCGCCACC TGGAT GCTGGCGA TAACCGACAGCAAAT Dhaf_0369 408903 - 410777 + | TRAP dicarboxylate transporter, DctM subunit TERM 569 410822 - 410871 + F 71 -8.7 -3.24563 | opp_overlap 410825, overlap 410820 410825 410827 TGCATATGCCCTCTC AAATACCTTTCATAACCAGGTCT CGCT GGAGCTGGTCATGAAAGGTATCC TATTGTCCGGCTTTT TERM 570 410825 - 410868 + F 100 -14.8 -2.80252 | opp_overlap 410825, overlap 410822 410820 410827 ATATGCCCTCTCAAA TACCTTTCATAACCAGGTCT CGCT GGAGCTGGTCATGAAAGGTA TCCTATTGTCCGGCT TERM 571 410868 - 410825 - f 100 -16.3 -3.53563 | opp_overlap 410822 410820 410825 410827 ATATGCCCTCTCAAA TACCTTTCATAACCAGGTC TCGCTG GAGCTGGTCATGAAAGGTA TCCTATTGTCCGGCT TERM 572 410827 - 410866 + F 95 -13 -2.94726 | opp_overlap 410825, overlap 410825 410822 410820 ATGCCCTCTCAAATA CCTTTCATAACCAGGTCT CGCT GGAGCTGGTCATGAAAGG TATCCTATTGTCCGG TERM 573 412123 - 412079 - g 91 -13.7 -3.54721 | CAAAAGGGTATAGAA CAGCTCAGTCTGTTCCAGG AAGAGAG CGAGGAACAAACTGAGCTG GATCGAACGGTGGAT Dhaf_0370 410972 - 412243 + | DNA-directed DNA polymerase Dhaf_0371 413348 - 412311 - | hypothetical protein TERM 574 412475 - 412497 + g 85 -7.7 -4.80167 | TGCCTTGTTCACCCA GGGCGAAGA GTACA TCTTCTCCC TTTTCGTTTTTGGTC TERM 575 413064 - 413052 - G 70 -7.7 -3.91897 | CTTTTGAGGTACAAA GAAGC GCA GCTTC TTGCCGGTGATGGCT TERM 576 413668 - 413656 - g 71 -4.7 -4.56597 | opp_overlap 413656 TCCCTCCTGGAAAAA CCTGC AGT GCTGG CGTTTTATCGTGGTA Dhaf_0372 413534 - 414070 + | nitroreductase Dhaf_0373 414119 - 414847 + | protein of unknown function DUF45 TERM 577 414868 - 414890 + F 100 -10.6 -4.65895 | opp_overlap 414859 414868 TACAAGTGCAAAAAA TCAGCAGGTT GAG GGCCTGCTGA TTTTTCCATAGACAC TERM 578 414890 - 414868 - f 100 -9.2 -5.11033 | opp_overlap 414868, overlap 414859 TACAAGTGCAAAAAA TCAGCAGG TTGAGGG CCTGCTGA TTTTTCCATAGACAC Dhaf_0374 414949 - 415788 + | Acylglycerol lipase TERM 579 415842 - 415864 + T 80 -4.9 -5.22289 | AAATTTAAGGCGAAA CAGCAGATT TTTAT AGTTTGCTG TTTTTATATTTGATA Dhaf_0375 417378 - 416020 - | transposase IS1182 family protein TERM 580 417444 - 417454 + H 86 -6.8 -5.04601 | ATTTCGAGATGTTGG GGAG GTA CTCC TTTTTAATTTGTCAA Dhaf_0376 417571 - 418347 + | protein of unknown function DUF218 TERM 581 418537 - 418512 - g 80 -9 -4.15543 | opp_overlap 418512 418514, overlap 418530 418531 CAAACATGGGGAAAA GACTTGGGTC AAAAGA GACCCCAGTC TATTAACCTGGGAAG Dhaf_0377 418381 - 418908 + | hypothetical protein Dhaf_0378 421034 - 418914 - | penicillin-binding protein, 1A family TERM 582 420606 - 420622 + g 71 -6.5 -4.15565 | GATAGTGCTGCCCCC CTCGGAG AAA TTCCGGG TTTTCAGGTCCTGGA TERM 583 421107 - 421085 - H 91 -7.7 -4.88895 | opp_overlap 421085 AAACAAAGAAATAAA CCATCGGTC TTAAT GACTGATGG TTTTGCTATAGGTAT TERM 584 421085 - 421107 + H 93 -9.9 -4.36262 | opp_overlap 421085 AAACAAAGAAATAAA CCATCGGTC TTAAT GACTGATGG TTTTGCTATAGGTAT TERM 585 421333 - 421354 + H 95 -7.3 -5.5353 | GCTGTGTTTTGTGTG GTTCCTTCT GACA AGGGGGAAC TTTTTTGTTGCTCTG Dhaf_0379 421405 - 422241 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 586 422252 - 422284 + T 100 -11.5 -4.92757 | gap 1, opp_overlap 422252 GCTAAAGCTAAGAAA GCAGCATGGCCATT TTTTCT AATGGC-ATGCTGC TTTTGTTATTCCTGC TERM 587 422284 - 422252 - T 100 -11.5 -4.29326 | gap 1, opp_overlap 422252 GCTAAAGCTAAGAAA GCAGCATGGCCATT TTTTCT AATGGC-ATGCTGC TTTTGTTATTCCTGC Dhaf_0380 422889 - 422290 - | NUDIX hydrolase TERM 588 422327 - 422342 + g 81 -7.6 -4.61633 | TGATATAAAATAGCC TGATCG CCAC CGATCA TTTTTACCCCTGTCT Dhaf_0381 424154 - 422931 - | major facilitator superfamily MFS_1 TERM 589 423125 - 423145 + g 71 -3.1 -4.8622 | opp_overlap 423088 423086, overlap 423128 AGGCAGCTCCTCCCA CGACCCCCT GAT AGGTGGCTG TTTTTCCTTCCGGGG TERM 590 424295 - 424284 - H 71 -3 -5.07053 | AATGATTTTAAAAAA CTTT AGGA AAAG AGGCAGGAAAAGCAA Dhaf_0382 424407 - 424991 + | Rubrerythrin TERM 591 425017 - 425041 + T 100 -10.8 -5.03145 | overlap 425021 CAGATCAGGATATTG CGAAGAACCC GTAAA GGGTTCTTTG TTTTTTGCAGAGTTG TERM 592 425021 - 425037 + T 95 -8 -5.04249 | overlap 425017 TCAGGATATTGCGAA GAACCC GTAAA GGGTTC TTTGTTTTTTGCAGA Dhaf_0383 426495 - 425176 - | major facilitator superfamily MFS_1 TERM 593 425469 - 425440 - G 91 -6.3 -5.19251 | gap 1 GAATATGAAGAAAAA GGCGGGCCAG-AGC TCT GCTGCCGGGCGGCC GCCGGCAATGATGAC TERM 594 426025 - 425989 - G 71 -4.3 -4.67982 | GGCCATCCAATAAAA GACATTCCGCCACCCGA AGG TCAGGGAGAGAAAGGTC AGGGGATAGAGGGCC Dhaf_0384 426656 - 427084 + | UspA domain protein TERM 595 427186 - 427205 + F 100 -9.3 -6.12458 | opp_overlap 427177 427178 TAAATAGGCCTTTAG CCCTGCT ATGGCA AGCAGGG TTTTTTCTTTTTTTA Dhaf_0385 427270 - 427683 + | hypothetical protein TERM 596 427668 - 427698 + F 100 -13.5 -5.7827 | GGGGACATGGGCATA CTTCGTTTTTGCT TGATT GGCAAAAACGAAG TTTTTTATTTATCTT Dhaf_0386 427910 - 428380 + | transcriptional repressor, CtsR Dhaf_0387 428397 - 428894 + | UvrB/UvrC protein Dhaf_0388 428899 - 429951 + | ATP:guanido phosphotransferase TERM 597 430667 - 430656 - g 73 -7.2 -4.18018 | overlap 430657 CGGGGGTAGGGAAAA CGGC CATT GCCG AGGGGCTGGCCCAAC Dhaf_0389 429989 - 432469 + | ATPase AAA-2 domain protein TERM 598 432463 - 432451 - f 80 -4.7 -5.0925 | overlap 432452 CCGTAAAAGCAAAAA GGCCG AAG CGGCG GAGTAGGTTGAATGA TERM 599 432462 - 432452 - f 73 -8.2 -3.64465 | overlap 432451 CGTAAAAGCAAAAAG GCCG AAG CGGC GGAGTAGGTTGAATG TERM 600 432480 - 432515 + F 100 -13.4 -3.7941 | opp_overlap 432479 432490, overlap 432483 AGTAGGTTGAATGAT GAGCCATAGACTAGCC CTGG GGTTAGTCTATGGTGC TTCTTGTGGCCGATC TERM 601 432483 - 432512 + F 100 -15.9 -2.98545 | opp_overlap 432479 432490, overlap 432480 AGGTTGAATGATGAG CCATAGACTAGCC CTGG GGTTAGTCTATGG TGCTTCTTGTGGCCG TERM 602 433477 - 433493 + G 73 -5.1 -4.62783 | GAATCGTTTCGGCTC CACCAAT GAG ATCGGTG TTTTTGAGATGCATG Dhaf_0390 432722 - 434071 + | DNA repair protein RadA TERM 603 434127 - 434100 - T 77 -6.4 -4.59081 | gap 1, overlap 434103 GAAATGGATATAAAA TA-AGCCGCATCC TGA AGATACGGCTGTA ACAGATTTTTCACTA TERM 604 434123 - 434103 - T 93 -9.7 -4.38744 | overlap 434100 ATGGATATAAAATAA GCCGCATCC TGA AGATACGGC TGTAACAGATTTTTC Dhaf_0391 434599 - 434207 - | hypothetical protein TERM 605 434927 - 434911 - g 70 -9.5 -3.17212 | opp_overlap 434905 434922 GTACTATGTCATGAA TATTCCC GTA GGGAATA TGAAGGTTTATATAC Dhaf_0392 434801 - 435277 + | transcriptional regulator, CarD family TERM 606 436022 - 435985 - g 81 -12.1 -3.01712 | gap 1, opp_overlap 435998 CTTTGTTCTGGAAGA GCTTCAGCATATC-GCGG ACT CCTCCGATCTGCTGAAGC GCAACCGCGGTCGTC Dhaf_0393 435359 - 436525 + | PilT protein domain protein TERM 607 436813 - 436854 + G 72 -10.9 -2.70994 | gap 1, opp_overlap 436819 436820, overlap 436820 CTCTTAGCTCGTTAA TCCAAAGGGTGGCGGTCC ATGATGG GGCCCGCC-CCCTTTTGA CTTGTCTGGAATTAA TERM 608 436848 - 436819 - g 71 -8.5 -3.75153 | gap 1, opp_overlap 436813 436820, overlap 436820 GCTCGTTAATCCAAA GGGTGGCGGTCC ATGATGG GGCCCGCC-CCC TTTTGACTTGTCTGG TERM 609 436820 - 436848 + G 80 -8.7 -4.34267 | opp_overlap 436819 436820, overlap 436813 CTCGTTAATCCAAAG GGTGGCGGTCC ATGATGG GGCCCGCCCCC TTTTGACTTGTCTGG TERM 610 437211 - 437241 + G 71 -10.5 -2.90075 | opp_overlap 437207 437203, overlap 437221 AAGCGAATGAATCAG GTGAATCATGGGG ACAGG TCCCTTGATTCAC TCTAGTTCAGGGAAC Dhaf_0394 436518 - 437246 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Dhaf_0395 437336 - 437812 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 611 438084 - 438102 + G 77 -10.3 -3.5241 | overlap 438092 ACAACGGACCTTACC GCCAGAC CGAGC GTCTGGC TCTTTATCAGGAATA TERM 612 438221 - 438209 - g 71 -9.1 -3.57462 | GATTTGATGGCTAAA GGGGA AAC TCCCC GCTACCTGGGTAAAT Dhaf_0396 437843 - 439309 + | glutamyl-tRNA synthetase TERM 613 439691 - 439720 + F 100 -13.7 -5.1167 | opp_overlap 439695 439696 CAGAGTGGAACCGCG GAAATCCTTCGTC TCTG GACGGAGGGTTTC TTTTTATATTGAGTT Dhaf_0397 439788 - 440459 + | serine O-acetyltransferase TERM 614 441310 - 441336 + G 74 -3.1 -5.1523 | gap 1, overlap 441296 441295 441311 441314 GGTTCGGGAGATTCT TGAA-CATTTCC CCGG GGAAGTGATTCG TTTTTATCTTCTGGG Dhaf_0398 440465 - 441898 + | cysteinyl-tRNA synthetase TERM 615 441928 - 441905 - f 72 -9.6 -3.15228 | gap 1, overlap 441902 441910 CTGAAATAGAAAGGA GGGAA-GGGCA TTC TGCCCGCTCCC ATGCCAAGATCCTGG Dhaf_0399 441950 - 442402 + | ribonuclease III Dhaf_0400 442434 - 443138 + | thymidylate synthase, flavin-dependent TERM 616 443342 - 443320 - g 71 -4 -4.74103 | CGTTTAACTGAAAAA GCCAAGCATC AAG GAATCCTGGC CTACGTCGCCCCCCG TERM 617 443817 - 443805 - g 76 -9.1 -3.80114 | opp_overlap 443803 GATCAATTCATTAAA CGCCA GTG TGGCG GGTTCCATTCTTATG Dhaf_0401 443128 - 443868 + | RNA methyltransferase, TrmH family, group 3 TERM 618 443983 - 443959 - f 70 -7.7 -3.71794 | AGCCAATCATGGAAA GGGCCGGGGCC AAA AGCCCAAACCC GGCTTGTAGAGTGCA Dhaf_0402 444130 - 444783 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 619 444857 - 444874 + F 81 -5.5 -5.0925 | TGAGAGGATCATGTG CCGGCTT GATG GAGTCGG TTTTTCATTTTCGAG TERM 620 445151 - 445172 + F 100 -7.9 -5.80817 | opp_overlap 445150 445151 ACCAAAGACGAAAAT CCGCATGGC TAAA GCTCTGCGG TTTTTTTATATTGAA Dhaf_0403 445302 - 445451 + | ribosomal protein L33 Dhaf_0404 445561 - 445779 + | preprotein translocase, SecE subunit TERM 621 445940 - 445968 + G 76 -9.7 -3.65046 | opp_overlap 445935, overlap 445943 GCGCGTAGAATCCAT GAACATGGAGGAT AAA ATCTTTCGTGTTC TTGTTCCCATGGAAG Dhaf_0405 445854 - 446381 + | NusG antitermination factor Dhaf_0406 446429 - 446857 + | ribosomal protein L11 Dhaf_0407 446907 - 447599 + | ribosomal protein L1 TERM 622 447765 - 447785 + F 77 -3.9 -5.13344 | ATTGGGCCTTCTTAA CCTCTGC AGTCAAA GCGGGGG TTTTTCTATTAGTGT Dhaf_0408 447828 - 448352 + | ribosomal protein L10 Dhaf_0409 448511 - 448885 + | ribosomal protein L7/L12 TERM 623 448905 - 448959 + T 100 -23.2 -3.81259 | gap 1, opp_overlap 448910 448913, overlap 448906 448910 448913 AGCCTATAATAGTGC TTAAAGAAGGCGCCCTTCTC-CACC CATAAA GGTGAGAGGAGGGCGCCTTCTTTGG TTTAATCCATTCTCT TERM 624 448906 - 448958 + T 100 -24.5 -2.88033 | gap 1, opp_overlap 448910 448913, overlap 448905 448910 448913 GCCTATAATAGTGCT TAAAGAAGGCGCCCTTCTC-CACC CATAAA GGTGAGAGGAGGGCGCCTTCTTTG GTTTAATCCATTCTC TERM 625 448954 - 448910 - T 100 -21.6 -3.57883 | gap 1, opp_overlap 448906 448905 448910 448913, overlap 448913 ATAATAGTGCTTAAA GAAGGCGCCCTTCTC-CACCC ATAA AGGTGAGAGGAGGGCGCCTTC TTTGGTTTAATCCAT TERM 626 448910 - 448954 + T 100 -23.1 -4.10953 | gap 1, opp_overlap 448910 448913, overlap 448906 448905 448913 ATAATAGTGCTTAAA GAAGGCGCCCTTCTC-CACC CATAAA GGTGAGAGGAGGGCGCCTTC TTTGGTTTAATCCAT TERM 627 448913 - 448951 + T 100 -19 -4.17002 | gap 1, opp_overlap 448910 448913, overlap 448910 448906 448905 ATAGTGCTTAAAGAA GGCGCCCTTCTC-CACC CATAAA GGTGAGAGGAGGGCGCC TTCTTTGGTTTAATC TERM 628 448951 - 448913 - T 100 -17.5 -3.91984 | gap 1, opp_overlap 448913 448910 448906 448905, overlap 448910 ATAGTGCTTAAAGAA GGCGCCCTTCTC-CACCC ATAA AGGTGAGAGGAGGGCGCC TTCTTTGGTTTAATC Dhaf_0410 450091 - 448961 - | response regulator receiver and SARP domain protein TERM 629 449004 - 449042 + g 71 -8.2 -3.75665 | TACAGAGTTTGTATG GATTTTCCAGGCTCAAGT CCC AATTCGGCCTGGAAAAGC TTTCGTACAGTATGA TERM 630 449626 - 449639 + g 71 -3.8 -4.72272 | CGGCCTTGGATGTCC GCCA TTTAAC TGGC TTTTTGCTGGCGGGG Dhaf_0411 453207 - 450151 - | signal transduction histidine kinase, LytS TERM 631 451574 - 451604 + g 82 -5.6 -5.07652 | overlap 451575 TTTAACCGGTTCTCA T-CCGCCCAAATCA AGTGC TGA-TTGGGCGGTA TTTTATTTTCCAGGG TERM 632 451575 - 451602 + g 87 -10.7 -4.16397 | gap 1, overlap 451574 TTAACCGGTTCTCAT CCGCCCAAATCA AGTGC TGA-TTGGGCGG TATTTTATTTTCCAG TERM 633 453545 - 453562 + G 73 -7.7 -4.07568 | opp_overlap 453548, overlap 453548 ATATTGAGGATGAGG TAAGGGC CAAG GCCCTTG TTTTAAGCGAAGAAC TERM 634 453548 - 453559 + G 73 -7.2 -4.17048 | opp_overlap 453548, overlap 453545 TTGAGGATGAGGTAA GGGC CAAG GCCC TTGTTTTAAGCGAAG TERM 635 454774 - 454730 - g 74 -9.3 -3.72893 | opp_overlap 454731 454741, overlap 454731 454733 TATCCGCTCATGAAA TCAGCTCGAAAGCGGTCTCCT TAA AGGACAATGCTTTCGAACTGC AGGCCGAGGCGGATC TERM 636 454773 - 454731 - g 81 -12.8 -2.83522 | opp_overlap 454731 454741, overlap 454730 454733 ATCCGCTCATGAAAT CAGCTCGAAAGCGGTCTCCT TAA AGGACAATGCTTTCGAACTG CAGGCCGAGGCGGAT TERM 637 454849 - 454838 - g 75 -5.8 -4.56597 | CCGCCTTGGCAAAAA CCAC GGAA GTGG CCAAAATTAAAAGTT TERM 638 455082 - 455064 - g 75 -10.2 -3.30159 | TGAAGTGGTGGAGAA CCTGGCGG ATA CCTCCAGG CAGATGCTGGTATAC Dhaf_0412 453412 - 455415 + | methyl-accepting chemotaxis sensory transducer Dhaf_0413 455487 - 456680 + | diguanylate phosphodiesterase TERM 639 456732 - 456701 - f 100 -13 -4.64861 | opp_overlap 456703, overlap 456703 TTTCCGGAAAACAAA CAGGGGCTGTTCCT TAAA AGGAGCAGCCCCTT TATATGATCAGGGGC TERM 640 456703 - 456730 + F 100 -17.8 -4.08706 | opp_overlap 456701 456703 TCCGGAAAACAAACA GGGGCTGTTCCT TAAA AGGAGCAGCCCC TTTATATGATCAGGG TERM 641 456730 - 456703 - f 100 -15.6 -3.93868 | opp_overlap 456703, overlap 456701 TCCGGAAAACAAACA GGGGCTGTTCCT TAAA AGGAGCAGCCCC TTTATATGATCAGGG TERM 642 457151 - 457137 - f 72 -10 -2.8055 | overlap 457134 457132 TATGTCATAATACTA TCCTCG GGG CGAGGA CATCACACTTGAGGG TERM 643 457851 - 457821 - g 85 -13.4 -2.88231 | ATGATAACGAGCATA TCCGTATTACCCTG GAG CGGGATAATACGGA GTCGGCAGAGGAAGC TERM 644 459644 - 459632 - g 73 -5.5 -4.59109 | overlap 459639 TATATCGCTCAAAAA CGGAA AAT CTCCG TTGGGGATAAAATGG Dhaf_0414 457178 - 460525 + | DNA-directed RNA polymerase, beta subunit TERM 645 461415 - 461405 - g 73 -3.2 -4.8622 | opp_overlap 461412 GTCCGCAACGAAAAA CGGA TGC TCCA GGAGGCCGTGGATGC TERM 646 461819 - 461834 + G 71 -9 -3.50853 | CACCGCTTAGGGATT CAGGCT TTTG AGCCTG TTCTGGTTGAAGGGC TERM 647 462555 - 462539 - g 79 -10.1 -3.74251 | GAGATCTGGACCAAA GCCACGG ACA CCGTGAC CAAAGCCTTGATGCA TERM 648 463105 - 463095 - g 76 -8.2 -4.11216 | overlap 463096 TCCTCACTTGCAAAA CCCG CTA CGGG GTGTGCCGCAAGTGC Dhaf_0415 460550 - 464017 + | DNA-directed RNA polymerase, beta' subunit Dhaf_0416 464111 - 464362 + | ribosomal protein L7AE family protein TERM 649 464392 - 464426 + F 100 -17.4 -3.97959 | AATGTGTTAGTTTTG GGGATTGCTTGCTTTA TGC TGAAGCAAGCAATTCC TTTGATATGTTCTTT Dhaf_0417 464462 - 464884 + | ribosomal protein S12 TERM 650 465181 - 465164 - g 80 -9.1 -4.1899 | gap 1, overlap 465167 GTATTGGAGGTAAAA GCACGCCG TGT CGGCG-GC GCCAACTACCAAGTA TERM 651 465179 - 465167 - g 73 -10.5 -3.11208 | overlap 465164 TTGGAGGTAAAAGCA CGCCG TGT CGGCG GCGCCAACTACCAAG Dhaf_0418 464936 - 465406 + | ribosomal protein S7 Dhaf_0419 465475 - 467553 + | translation elongation factor G Dhaf_0420 467678 - 468880 + | translation elongation factor Tu TERM 652 468927 - 468967 + F 75 -9 -3.62096 | opp_overlap 468934, overlap 468928 468966 AGACTTAGAGTCTAT TGATAAAGGATGCCACAG ATTCA CTGTGGCATCCTGCCTCG TTTCCACTGCTGGGA TERM 653 468928 - 468966 + F 75 -10.3 -2.77043 | opp_overlap 468934, overlap 468927 GACTTAGAGTCTATT GATAAAGGATGCCACAG ATTCA CTGTGGCATCCTGCCTC GTTTCCACTGCTGGG TERM 654 468960 - 468934 - f 100 -16.7 -3.92373 | opp_overlap 468928 468927 GAGTCTATTGATAAA GGATGCCACAG ATTCA CTGTGGCATCC TGCCTCGTTTCCACT Dhaf_0421 469108 - 469416 + | ribosomal protein S10 TERM 655 469502 - 469445 - f 80 -10 -3.61371 | opp_overlap 469436 469445 AAACCTGAGCGCAAA CGCTGGTTTAATCGCCTGCCTGAA AGATTAAAGA TTCAGACAGACGAAAAAACTAGCG TTCATTTGGGGTTTA TERM 656 469712 - 469698 - g 77 -4.2 -5.00884 | opp_overlap 469698, overlap 469699 ATTTTGGGTAAAAAA GTGGGT ATG ACCCAG GTTTTCACGGAAGAA TERM 657 469896 - 469884 - g 73 -7.7 -4.10657 | GGACATGTTGCAAAA GCTTC TGT GAAGC CGATGCGCTACATTC Dhaf_0422 469671 - 470300 + | ribosomal protein L3 Dhaf_0423 470325 - 470948 + | ribosomal protein L4/L1e TERM 658 471124 - 471098 - g 70 -8 -3.84719 | ATGTTTAAAGTTAAA GTCGTTGATGTT CGT ACCATCAACGTC GATGGTAAAAAGAAG Dhaf_0424 470948 - 471235 + | Ribosomal protein L25/L23 Dhaf_0425 471260 - 472090 + | ribosomal protein L2 Dhaf_0426 472110 - 472391 + | ribosomal protein S19 Dhaf_0427 472410 - 472754 + | ribosomal protein L22 Dhaf_0428 472758 - 473417 + | ribosomal protein S3 Dhaf_0429 473418 - 473855 + | ribosomal protein L16 Dhaf_0430 473845 - 474048 + | ribosomal protein L29 Dhaf_0431 474072 - 474332 + | ribosomal protein S17 Dhaf_0432 474368 - 474736 + | ribosomal protein L14 Dhaf_0433 474764 - 475102 + | ribosomal protein L24 TERM 659 475331 - 475316 - g 73 -3.2 -4.86001 | opp_overlap 475329 475329 ATCACCGGACAAAAA CCCG TTGTAACC CGGG CGAAGAAATCCATCG Dhaf_0434 475124 - 475663 + | ribosomal protein L5 Dhaf_0435 475684 - 475869 + | ribosomal protein S14 Dhaf_0436 475895 - 476293 + | ribosomal protein S8 Dhaf_0437 476318 - 476872 + | ribosomal protein L6 Dhaf_0438 476925 - 477293 + | ribosomal protein L18 Dhaf_0439 477318 - 477818 + | ribosomal protein S5 Dhaf_0440 477830 - 478012 + | ribosomal protein L30 Dhaf_0441 478031 - 478474 + | ribosomal protein L15 TERM 660 478835 - 478852 + G 76 -7 -4.35518 | TTATGGAACCGTCAT CCTTGG TTTCAT CCAAGG TTTTGGTATGACCTT Dhaf_0442 478476 - 479765 + | preprotein translocase, SecY subunit Dhaf_0443 479777 - 480430 + | Adenylate kinase Dhaf_0444 480423 - 481169 + | methionine aminopeptidase, type I Dhaf_0445 481204 - 481422 + | translation initiation factor IF-1 Dhaf_0446 481446 - 481559 + | ribosomal protein L36 Dhaf_0447 481736 - 482107 + | ribosomal protein S13 Dhaf_0448 482126 - 482515 + | ribosomal protein S11 TERM 661 482702 - 482677 - g 71 -8.5 -3.61894 | gap 1, opp_overlap 482682, overlap 482678 AAGCCGTGGCAAGAA GCCAACTGAATA TGG TATTCAGTTG-C GTGAAAAACAAAAAG Dhaf_0449 482528 - 483154 + | ribosomal protein S4 Dhaf_0450 483218 - 484165 + | DNA-directed RNA polymerase, alpha subunit Dhaf_0451 484192 - 484530 + | ribosomal protein L17 TERM 662 484567 - 484588 + F 100 -14.5 -4.75776 | opp_overlap 484567 GTCTCTGTGAGAAAA GCCAGGCTT TATT AAGCCTGGC TTTTTGAGTTGCGTT TERM 663 484588 - 484567 - f 100 -14.5 -4.36914 | opp_overlap 484567 GTCTCTGTGAGAAAA GCCAGGCTT TATT AAGCCTGGC TTTTTGAGTTGCGTT TERM 664 484757 - 484743 - g 100 -4.2 -5.9667 | overlap 484746 AAAAAGAGAAAAAAA GCAGAT TGA AGCTGC TCAATCAAGACCAGG Dhaf_0452 484718 - 485761 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 665 485802 - 485830 + F 100 -17.6 -4.2349 | AGGTTATTTTGCCGA TCTCCCGCAAAG CTCAC CTTTGCGGGAGA TTTTCCATGTCCAGC Dhaf_0453 486086 - 487666 + | 4-phytase TERM 666 487680 - 487709 + F 100 -16.5 -4.77757 | opp_overlap 487687 AGCAAGCGCAGGCTG CCGAGAACCGGTA TCTT TACCGGTTCCCGG TTTTGCTTTTTCACA TERM 667 487702 - 487687 - f 71 -9 -3.29144 | opp_overlap 487680 GCAGGCTGCCGAGAA CCGGTA TCTT TACCGG TTCCCGGTTTTGCTT TERM 668 487777 - 487792 + F 75 -3.2 -5.13648 | ATTTTTTTCACGAGG CTTGCC GCCC GCCAAG TTTTCTTTATCTTTA Dhaf_0454 487827 - 488834 + | binding-protein-dependent transport systems inner membrane component TERM 669 489029 - 489042 + G 75 -8.1 -4.16943 | CTGGGTGAGCAACCT CCTGG GCAT CCAGG TTTTGCCCTATGACC Dhaf_0455 488847 - 489776 + | binding-protein-dependent transport systems inner membrane component TERM 670 489982 - 489963 - g 71 -9.2 -3.48276 | opp_overlap 489972 489974, overlap 489974 GGGGCTTTTACAGAA CCCCGGCA AAAT TGCCGGCG GCGATATTCTGTTTG TERM 671 490416 - 490432 + G 70 -8 -3.90744 | overlap 490419 GGCGGTTTTGCTGAT CACCCA TGACC TGGGTG TTGTTTCAGAAGCGG Dhaf_0456 489790 - 490788 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 672 491264 - 491231 - g 71 -4.5 -4.51743 | gap 1, overlap 491232 CCAGCATCAAAGAAA CCGCTACCCTCACGAA TTT TCCG-GAGGCCAGCGC CAGCGGGTAGGGATT Dhaf_0457 490785 - 491750 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 673 491726 - 491739 + T 74 -4.5 -4.8622 | TTCTCCGGGGCATTG GGTGG CCTG CCATC TTTTTGATTAGGAAG TERM 674 491771 - 491824 + T 100 -19.3 -3.35438 | opp_overlap 491771 491775 491779, overlap 491775 491779 CTTATCGAAAATCAA TAAAGAAAGATGACCTTAGCCTGCA TTAT TGTAAGATAAGGTCATCTTTCTTTA TTGTGGAATATCATA TERM 675 491824 - 491771 - T 100 -19.3 -3.69605 | opp_overlap 491771 491775 491779, overlap 491775 491779 CTTATCGAAAATCAA TAAAGAAAGATGACCTTAGCCTGCA TTAT TGTAAGATAAGGTCATCTTTCTTTA TTGTGGAATATCATA TERM 676 491820 - 491775 - T 100 -15.7 -4.45765 | opp_overlap 491775 491771 491779, overlap 491771 491779 TCGAAAATCAATAAA GAAAGATGACCTTAGCCTGCA TTAT TGTAAGATAAGGTCATCTTTC TTTATTGTGGAATAT TERM 677 491775 - 491820 + T 100 -15.7 -4.32579 | opp_overlap 491771 491775 491779, overlap 491771 491779 TCGAAAATCAATAAA GAAAGATGACCTTAGCCTGCA TTAT TGTAAGATAAGGTCATCTTTC TTTATTGTGGAATAT TERM 678 491816 - 491779 - T 100 -10.7 -4.74653 | opp_overlap 491779 491775 491771, overlap 491775 491771 AAATCAATAAAGAAA GATGACCTTAGCCTGCA TTAT TGTAAGATAAGGTCATC TTTCTTTATTGTGGA TERM 679 491779 - 491816 + T 100 -10.7 -4.73677 | opp_overlap 491775 491771 491779, overlap 491775 491771 AAATCAATAAAGAAA GATGACCTTAGCCTGCA TTAT TGTAAGATAAGGTCATC TTTCTTTATTGTGGA Dhaf_0458 492370 - 491822 - | hypothetical protein TERM 680 492277 - 492256 - G 83 -9.5 -4.20883 | CAAAAAGTTGCAAAA GAGCTCCTA AAAA TAAGAGCTC CAGTCCTTTAAGGTT Dhaf_0459 493675 - 492389 - | metal dependent phosphohydrolase TERM 681 493385 - 493371 - G 79 -10 -3.8709 | AAACGTTTCCATAAA GGCTGA TCT TCAGCC GCCTTGCCAAAGAGA Dhaf_0460 494605 - 493946 - | hypothetical protein Dhaf_0461 495426 - 494725 - | pseudouridine synthase TERM 682 495479 - 495501 + r 74 -7 -4.3898 | overlap 495483 ATTACTACTTCTATT TTTAGCAGGA TTT TCCTGCTGCA TTTTGTCGGAATAGT TERM 683 495483 - 495497 + r 72 -10 -2.80077 | overlap 495479 CTACTTCTATTTTTA GCAGGA TTT TCCTGC TGCATTTTGTCGGAA TERM 684 495527 - 495549 + r 100 -13.5 -3.83205 | opp_overlap 495527 ATAGTGAAACAAAAA GCCAGGTCA TGAAT TGACCTGGC TTTGCTGTAAAGAGT TERM 685 495549 - 495527 - R 100 -13.5 -5.31519 | opp_overlap 495527 ATAGTGAAACAAAAA GCCAGGTCA TGAAT TGACCTGGC TTTGCTGTAAAGAGT Dhaf_0462 497179 - 495569 - | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 686 496048 - 496063 + g 76 -2.5 -5.34309 | overlap 496049 CCTGGTCACCGATCA TGAGG GCCATG CCTCG TTTTTGTTTGATGAT TERM 687 497095 - 497075 - G 74 -8.9 -3.7282 | GCAGCCTACTAAGAA GCCGGAGCC GGC GACTACGGC AGCGCCTAAAGAAGC Dhaf_0463 497237 - 497335 + | hypothetical protein Dhaf_0464 497594 - 499561 + | sigma54 specific transcriptional regulator, Fis family TERM 688 499561 - 499603 + T 83 -11.6 -3.01791 | gap 1, opp_overlap 499566, overlap 499566 GGTATTGGATGCATA AAAAACAGGGCATTATCAG CAAGAA CTGATAA-GCCCTGTTTTC TATTGACAGAGAAGT TERM 689 499598 - 499566 - T 100 -12.2 -5.28176 | gap 1, opp_overlap 499566 499561 TGGATGCATAAAAAA CAGGGCATTATCAGC AAGA ACTGATAA-GCCCTG TTTTCTATTGACAGA TERM 690 499566 - 499598 + T 100 -11.5 -4.66537 | gap 1, opp_overlap 499566, overlap 499561 TGGATGCATAAAAAA CAGGGCATTATCAG CAAGAA CTGATAA-GCCCTG TTTTCTATTGACAGA Dhaf_0465 501267 - 499693 - | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 691 501491 - 501459 - R 100 -19.3 -5.2291 | opp_overlap 501465 AGAGCATAAGAAAAA CGTAAAGACCTCTGG TAG CCAGTGGTCTTTACG TTAAGCTTAACCGCC TERM 692 501465 - 501485 + r 88 -11.1 -3.76839 | opp_overlap 501459 TAAGAAAAACGTAAA GACCTCTGG TAG CCAGTGGTC TTTACGTTAAGCTTA Dhaf_0466 502829 - 501582 - | major facilitator superfamily MFS_1 TERM 693 502421 - 502436 + g 71 -4.6 -4.64861 | overlap 502422 AACCGGCGACGACGA TGCCTG AGAT CAGGCC TTTCTTTTGGGGAGG TERM 694 503061 - 503042 - R 100 -15 -4.43208 | opp_overlap 503060 ATATGGTTAAAGAAA GGCCAGGG GAAT CCCTGGCC TCATAGTAGTGAGGG Dhaf_0467 505029 - 503098 - | acetate/CoA ligase TERM 695 503367 - 503354 - G 70 -8.1 -3.82097 | opp_overlap 503356, overlap 503356 TTTAAAGTGACGAAA CAGGC CAGG GCCTG CCCTTTAACTTCATG TERM 696 504937 - 504955 + g 77 -4.5 -4.87786 | TTGTTCATAGATATC CGCGCTT TGAAT GAGTGCG TTTTTGTGGAATTCC Dhaf_0468 505353 - 506168 + | tRNA pseudouridine synthase A TERM 697 506228 - 506215 - f 70 -5.3 -4.56597 | opp_overlap 506195 506215 GGGCTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACAGGAA TERM 698 506215 - 506228 + F 70 -5.3 -4.56597 | opp_overlap 506215, overlap 506195 GGGCTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACAGGAA TERM 699 506291 - 506264 - f 100 -12.1 -4.08485 | opp_overlap 506264 TTCACTGAAAGGAAA GCCTGAGGAAA GTCAAT TCTCCTCAGGC TTTTGGCATTGACTG TERM 700 506264 - 506291 + F 91 -10.6 -4.19953 | opp_overlap 506264 TTCACTGAAAGGAAA GCCTGAGGAAAG TCAA TTCTCCTCAGGC TTTTGGCATTGACTG Dhaf_0469 506430 - 507590 + | isochorismate synthase Dhaf_0470 507606 - 509258 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 701 510005 - 509975 - g 79 -10.5 -3.6682 | overlap 509998 GCTCATGGATTTAAA CCCCGGAATCA AGAGGGAGA TGATCCCGGGG GCGGGACATAATGCT Dhaf_0471 509286 - 510089 + | alpha/beta hydrolase fold protein Dhaf_0472 510170 - 511009 + | naphthoate synthase TERM 702 511750 - 511776 + G 73 -7.2 -4.2828 | overlap 511751 TGAGGATTGTCAACC GCATCCGCCAAC ATC GTTTGCGGGTGG TTTTGGTGAGTGGGG TERM 703 511751 - 511775 + G 76 -10.7 -3.16647 | overlap 511750 GAGGATTGTCAACCG CATCCGCCAAC ATC GTTTGCGGGTG GTTTTGGTGAGTGGG TERM 704 512292 - 512317 + G 87 -14.1 -2.52464 | GAGGAGCTCAGGGAT TATCTGGCCGG GAAG CTGGCCAGATA TAAATTGCCCCGGAA TERM 705 512373 - 512363 - g 77 -6.8 -4.58395 | GTCACTGCCGAAAAA TGCC ACG GGCA AAATACTGAAAAAGA Dhaf_0473 511056 - 512417 + | O-succinylbenzoate-CoA ligase TERM 706 512550 - 512567 + G 73 -4.9 -4.82901 | gap 1 CGGGTTTGGCGAAGC GGTTGCCT TCA AGG-AACC TTTTTATACAGGGGA TERM 707 513009 - 512995 - g 73 -10 -3.35798 | opp_overlap 513002, overlap 512998 AGTTTCCAGGCAGAA CAGCTC CCC GAGCTG AGAGAAATGGATCAG Dhaf_0474 512407 - 513543 + | Mandelate racemase/muconate lactonizing protein Dhaf_0475 513977 - 513540 - | hypothetical protein TERM 708 514169 - 514152 - H 78 -2.1 -5.53991 | gap 1 GATGTAGGAAAAAAA TTTAG-CA AAT TGACTAAA ATGTACTTGATTTTG Dhaf_0476 514347 - 514910 + | peroxiredoxin TERM 709 515254 - 515269 + G 75 -10.4 -3.33696 | TGCCACCGGGTCTGT GCCCAG AAAG CTGGGC TTCATTGGGGAAGAG Dhaf_0477 514916 - 516583 + | alkyl hydroperoxide reductase F subunit TERM 710 516649 - 516691 + F 100 -17.9 -3.62275 | opp_overlap 516657, overlap 516651 CATGCCTGGGGCATG GGGCATAAGGCGGATAGCT GGGGA AGCTGTCCGCCTTATGCTG TTTGCCCTGATGAGT TERM 711 516651 - 516689 + F 100 -22.7 -3.39018 | opp_overlap 516657, overlap 516649 TGCCTGGGGCATGGG GCATAAGGCGGATAGCT GGGGA AGCTGTCCGCCTTATGC TGTTTGCCCTGATGA TERM 712 516683 - 516657 - f 95 -12.3 -3.30124 | opp_overlap 516651 516649 GGGCATGGGGCATAA GGCGGATAGCT GGGGA AGCTGTCCGCC TTATGCTGTTTGCCC TERM 713 517078 - 517066 - g 71 -6.9 -4.17048 | overlap 517067 GGCTGCTTAAAATAA CGGGG GAT CCCCA AAATTCCTATACCTT TERM 714 517084 - 517121 + G 71 -6.4 -4.17556 | gap 1, opp_overlap 517083 517120, overlap 517085 GGGATCCCCAAAATT CCTATA-CCTTGGGCAC TCTGT GTGCCAAAGGATATAGC TTTGTTAAGCATGTG TERM 715 517085 - 517120 + G 70 -9.9 -3.10052 | gap 1, opp_overlap 517083, overlap 517084 GGATCCCCAAAATTC CTATA-CCTTGGGCAC TCTGT GTGCCAAAGGATATAG CTTTGTTAAGCATGT TERM 716 517321 - 517302 - g 71 -6.4 -4.18018 | CTCCTGGACGGAAAA GCCAATAC CGGG GTCTTGGC GCGCTCTTTGTCCGG Dhaf_0478 516972 - 518984 + | molybdopterin oxidoreductase TERM 717 520378 - 520360 - g 73 -8.2 -3.85698 | GGCGGCCCGGATAAA TGGTATCA TTC CGATACCA CCGGCCGTCTGGCTA TERM 718 521439 - 521419 - g 73 -5.4 -4.59773 | CGCTATTTCCAAAAA GGAGACTT GCAGG AAGTCACC AATCCCAACAAAAAT Dhaf_0479 519181 - 521535 + | molybdopterin oxidoreductase TERM 719 521737 - 521716 - g 85 -7.9 -4.7373 | opp_overlap 521719 TCATCTGACGAAAAA CTGGCTGAC CGTG GCCTGCCAG CATTGTGAAAATGCC Dhaf_0480 521540 - 522151 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_0481 522165 - 523406 + | Polysulphide reductase NrfD TERM 720 523811 - 523801 - g 71 -4.6 -4.57341 | AATTTCCCGTAAAAA CCAG CTG CCGG AGGACCATCTGGGGT Dhaf_0482 523409 - 524125 + | cytoplasmic chaperone TorD family protein Dhaf_0483 524122 - 524646 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_0484 524733 - 525947 + | transcriptional regulator, CdaR TERM 721 526068 - 526017 - f 100 -22 -3.72453 | opp_overlap 526021 526031, overlap 526021 ATGAAGAATGCCAAA TAAAGAGGAACAAACGGATAGC AGTAAGAG GCTGTCCGTTTGTTCCTCTTTA AAATTGATTTGCTCT TERM 722 526064 - 526021 - f 100 -18.4 -4.46835 | opp_overlap 526021 526031, overlap 526017 AGAATGCCAAATAAA GAGGAACAAACGGATAGC AGTAAGAG GCTGTCCGTTTGTTCCTC TTTAAAATTGATTTG TERM 723 526021 - 526064 + F 100 -20.6 -3.70505 | opp_overlap 526021 526017, overlap 526031 AGAATGCCAAATAAA GAGGAACAAACGGATAGC AGTAAGAG GCTGTCCGTTTGTTCCTC TTTAAAATTGATTTG TERM 724 526031 - 526054 + F 70 -6 -4.36433 | opp_overlap 526021 526017, overlap 526021 ATAAAGAGGAACAAA CGGATAGC AGTAAGAG GCTGTCCG TTTGTTCCTCTTTAA Dhaf_0485 526242 - 526490 + | Tail Collar domain protein Dhaf_0486 526566 - 526829 + | Tail Collar domain protein TERM 725 526887 - 526875 - g 77 -4.1 -5.03314 | overlap 526864 TTTAGCTCTAAAAAA GCCAA CTA TTAGC AGCAGTTATCTTCAG Dhaf_0487 526849 - 528216 + | coagulation factor 5/8 type domain protein Dhaf_0488 529915 - 528614 - | transposase IS116/IS110/IS902 family protein TERM 726 528871 - 528897 + g 71 -2.8 -4.90778 | overlap 528879 TAAACAGAATTCTTC TCCCGATCCGTG TGC CGCGTTTCGAGA TTTTATTTCGGTCAC TERM 727 530819 - 530805 - g 81 -5.8 -4.91109 | CGGCTATTATAAAAA TAATCA CAC TGATTA CGGTAGCTGCGGTGA TERM 728 531845 - 531823 - g 72 -11.2 -2.58714 | opp_overlap 531820 531823, overlap 531827 TTCGAGAGCAACGGA GGAAGCGCGG TCG CCGCGATCCC TAATGTGGTAGAGAA TERM 729 532298 - 532276 - g 72 -11.2 -2.58714 | overlap 532272 532280 TTCGAGAGCAACGGA GGAAGCGCGG TCG CCGCGATCCC CAATGTGGTGGAAAA TERM 730 533314 - 533294 - g 77 -3.9 -5.07107 | overlap 533295 533297 GAAATGGCCAAAAAA TTACCATCG GCA CGATGGACA TCACGGTCGATCCCA TERM 731 533311 - 533297 - g 73 -10 -3.38056 | overlap 533295 533294 ATGGCCAAAAAATTA CCATCG GCA CGATGG ACATCACGGTCGATC Dhaf_0489 530260 - 534618 + | cell wall/surface repeat protein TERM 732 534657 - 534625 - T 78 -4.3 -5.18866 | gap 1, opp_overlap 534630 534633, overlap 534629 534630 GGGAAATAAAGAAAA TACATGAAGAAGGG AACTTG CCCTCCTTC-TATA ATGAAAACGGCGGCG TERM 733 534689 - 534659 - T 100 -14.1 -3.28712 | opp_overlap 534665, overlap 534665 GCCCTCCTTCTATAA TGAAAACGGCGGC GGAAG GCCGTCGTTTTCA TATGCAAATGCTTCT TERM 734 534683 - 534665 - T 78 -7.3 -4.48987 | opp_overlap 534665, overlap 534659 CTTCTATAATGAAAA CGGCGGC GGAAG GCCGTCG TTTTCATATGCAAAT TERM 735 534665 - 534683 + T 88 -9.5 -4.3467 | opp_overlap 534665 534659 CTTCTATAATGAAAA CGGCGGC GGAAG GCCGTCG TTTTCATATGCAAAT Dhaf_0490 536068 - 534737 - | protein of unknown function DUF214 TERM 736 534842 - 534832 - G 76 -8.2 -4.00132 | AAATTGAAAAGACAA CGGC AAA GCCG ATAAGCCAGAGGGGT TERM 737 535121 - 535132 + g 75 -5.8 -4.58283 | AGCTCCCAGTCCTCC CAGC ATCA GCTG TTTTTGCCGCGCTTC TERM 738 536017 - 536043 + g 80 -6.4 -4.6644 | opp_overlap 536032 ATAAGGTTCTGGATT TGCGGCGGCGCA AAT TGCGCAGGCACA TTTTTAAAATATCTT Dhaf_0491 538645 - 536072 - | hypothetical protein TERM 739 536475 - 536457 - G 73 -5.2 -4.51196 | opp_overlap 536457 TGCAAAGGCATAAAA GCAAAACC GAT GGTGCTGC TCTTTCCCGCCTCAA TERM 740 537039 - 537058 + g 76 -8.6 -4.02534 | opp_overlap 537043, overlap 537043 CTGACGATGAGATAG GGAACCGA GGCG TCGGTTTC TTTATGACTTTCGGT TERM 741 537043 - 537054 + g 75 -5.8 -4.59993 | opp_overlap 537043, overlap 537039 CGATGAGATAGGGAA CCGA GGCG TCGG TTTCTTTATGACTTT TERM 742 537884 - 537903 + g 71 -4.2 -4.67038 | overlap 537886 AACGCTTTGGGACGC CGGGGG AAGCTCAC TCCCCG TTTTGATTTTCACGG Dhaf_0492 539371 - 538655 - | ABC transporter related TERM 743 539616 - 539585 - H 73 -8.8 -3.54543 | opp_overlap 539571 539585 AGGTATTTGTTTAAA TCCCCTTAGTTAGC TTAG GTTAACCAAGGAGA TTTCTTTTTGCCTTT TERM 744 539585 - 539616 + H 86 -6.6 -4.92828 | opp_overlap 539585, overlap 539571 AGGTATTTGTTTAAA TCCCCTTAGTTAGC TTAG GTTAACCAAGGAGA TTTCTTTTTGCCTTT TERM 745 539806 - 539794 - g 73 -4.8 -4.67608 | opp_overlap 539798, overlap 539779 TATTTTAAGATAAAA CAGC TTATC GCTG TGATAATCCTATTAA Dhaf_0493 539758 - 542826 + | signal transduction histidine kinase, LytS TERM 746 543524 - 543514 - g 71 -6.8 -4.16284 | overlap 543516 543517 AGATTGGCGAACAAA CAGC CAT GCTG GCTCAGCAGGAGAAA TERM 747 543963 - 543981 + G 78 -5.2 -4.99645 | ATCGTGCTGATCATC CTGTTGGC AAG GACGACAG TTTTATTTCTGAGAT Dhaf_0494 542910 - 544847 + | signal transduction histidine kinase, LytS Dhaf_0495 544874 - 545971 + | response regulator receiver and SARP domain protein TERM 748 545981 - 546021 + F 100 -8.5 -5.68438 | gap 1, opp_overlap 545987 545989, overlap 545989 CAATAGTATATGGTG TGAA-AAGAGGCTCCGGA GGAATG TCCGGGGCCTTTTGTTTA TTTTTTGTTTAGTCG TERM 749 546014 - 545987 - f 71 -6.9 -4.09243 | opp_overlap 545981 545989, overlap 545989 TATATGGTGTGAAAA GAGGCTCCGGA GGAATG TCCGGGGCCTT TTGTTTATTTTTTGT TERM 750 545989 - 546012 + F 100 -11.7 -5.3472 | opp_overlap 545987 545989, overlap 545981 TATGGTGTGAAAAGA GGCTCCGGA GGAATG TCCGGGGCC TTTTGTTTATTTTTT TERM 751 546012 - 545989 - f 78 -9.5 -3.6422 | opp_overlap 545989 545981, overlap 545987 TATGGTGTGAAAAGA GGCTCCGGA GGAATG TCCGGGGCC TTTTGTTTATTTTTT Dhaf_0496 546106 - 550758 + | Immunoglobulin I-set domain protein TERM 752 550804 - 550839 + F 90 -11.2 -4.02542 | opp_overlap 550802 550805 550807, overlap 550805 550807 CCTAATAATTAAAGC ACACTTCCTATCAGGT CAAA GCCGGATAGGAAGTGC TTTGGTTATGGGTTT TERM 753 550805 - 550838 + F 100 -14.7 -3.00441 | opp_overlap 550802 550805 550807, overlap 550804 550807 CTAATAATTAAAGCA CACTTCCTATCAGGT CAAA GCCGGATAGGAAGTG CTTTGGTTATGGGTT TERM 754 550838 - 550805 - f 100 -14 -3.07051 | opp_overlap 550805 550804 550807, overlap 550802 550807 CTAATAATTAAAGCA CACTTCCTATCAGG TCAAAG CCGGATAGGAAGTG CTTTGGTTATGGGTT TERM 755 550836 - 550807 - f 79 -10.8 -3.08072 | opp_overlap 550805 550804 550807, overlap 550805 550802 AATAATTAAAGCACA CTTCCTATCAGG TCAAAG CCGGATAGGAAG TGCTTTGGTTATGGG TERM 756 550807 - 550836 + F 83 -11.5 -3.04864 | opp_overlap 550807 550805 550802, overlap 550805 550804 AATAATTAAAGCACA CTTCCTATCAGGT CAAA GCCGGATAGGAAG TGCTTTGGTTATGGG TERM 757 551687 - 551704 + G 71 -2.7 -4.95155 | opp_overlap 551679, overlap 551690 AGCGAAATTCCTCTG GAAGCTT CTAT AAGCTTG TTTTTCTCCTATGCA Dhaf_0497 550925 - 552016 + | response regulator receiver and SARP domain protein TERM 758 552169 - 552131 - f 75 -8.4 -3.889 | gap 1, opp_overlap 552137, overlap 552137 CTGAAGGAGAGCAAA GAGGAAGCGCTTGAAAT TGCGGG ATTTCAAGCGCTTT-TC TAATCATTTCAGAGA TERM 759 552137 - 552164 + F 100 -13.6 -4.52703 | opp_overlap 552131 552137 GAGAGCAAAGAGGAA GCGCTTGAAATT GCGG GATTTCAAGCGC TTTTCTAATCATTTC TERM 760 552164 - 552137 - f 100 -12.9 -3.4934 | opp_overlap 552137, overlap 552131 GAGAGCAAAGAGGAA GCGCTTGAAAT TGCGGG ATTTCAAGCGC TTTTCTAATCATTTC TERM 761 552267 - 552303 + F 91 -11.8 -3.53224 | opp_overlap 552270 552275, overlap 552268 552275 AAAATCAGAAGTAAG TCATGAAAGGGGTATG ATGTG CATACCTCTTTTATGG TTTAAGCACAAAATA TERM 762 552268 - 552302 + F 91 -13.1 -2.71791 | opp_overlap 552270 552275, overlap 552267 552275 AAATCAGAAGTAAGT CATGAAAGGGGTATG ATGTG CATACCTCTTTTATG GTTTAAGCACAAAAT TERM 763 552275 - 552295 + F 86 -7.6 -4.61566 | opp_overlap 552270 552275, overlap 552268 552267 AAGTAAGTCATGAAA GGGGTATG ATGTG CATACCTC TTTTATGGTTTAAGC Dhaf_0498 552410 - 553618 + | major facilitator superfamily MFS_1 TERM 764 553820 - 553830 + G 73 -4.6 -4.67038 | TCCTCCGGGTTTACA GCCG CCA TGGC TTTTCCTTTTGAGCA TERM 765 554598 - 554582 - g 81 -8 -4.56597 | opp_overlap 554582 CTTTTTGCCCAAAAA CTGCTG GTGAT CAGCAG TTCGGTGCAGATTCC Dhaf_0499 553724 - 554710 + | hypothetical protein Dhaf_0500 554721 - 554948 + | transcriptional regulator, XRE family Dhaf_0501 554938 - 555930 + | hypothetical protein TERM 766 555935 - 555954 + F 100 -7.9 -5.60993 | CTGCTCTGTAGTGCT GCATACC GGGAAA GGTATGC TTTTTTTCTGCGCCG TERM 767 555990 - 556017 + F 95 -7.6 -5.21709 | TGATGTAAGGCAGGG CGAGGTAGCGGC TAGG GCTGAAACCTCG TTTTTTACTATCCGC TERM 768 557098 - 557086 - g 100 -9.1 -5.11613 | AGACCACTGAAAAAA GCCAG GTT CTGGC CTCCCGGCTTACCCT TERM 769 557562 - 557600 + G 85 -4.5 -5.42198 | gap 1, overlap 557563 557590 CTGAAAATTCTGGTT GCCGA-GGGGAAGGAGAT CGGG ATCACCCTCTCCATCGGA TTTTCTTTTTTCAAA TERM 770 557563 - 557599 + G 70 -8 -3.83692 | gap 1, overlap 557562 557590 TGAAAATTCTGGTTG CCGA-GGGGAAGGAGAT CGGG ATCACCCTCTCCATCGG ATTTTCTTTTTTCAA Dhaf_0502 556134 - 557714 + | diguanylate cyclase TERM 771 558198 - 558176 - g 73 -7 -4.15106 | opp_overlap 558185, overlap 558167 GATGAATGCCGAAAA GCACTGCA ACAGCAA CGCAGTGC ATTAGAAGAAGAATA Dhaf_0503 557831 - 558370 + | transcriptional regulator, PadR-like family TERM 772 558398 - 558373 - f 82 -7.6 -4.50058 | overlap 558374 558375 CACTGAGAATTAAAA CCTCTCCCTC GTCACA GAGGGAGAAA AAAATACCCGTATAC TERM 773 558397 - 558374 - f 71 -8.9 -3.29312 | overlap 558373 558375 ACTGAGAATTAAAAC CTCTCCCTC GTCACA GAGGGAGAA AAAAATACCCGTATA TERM 774 558396 - 558375 - f 74 -10.2 -2.56864 | overlap 558374 558373 CTGAGAATTAAAACC TCTCCCTC GTCACA GAGGGAGA AAAAAATACCCGTAT TERM 775 558802 - 558830 + G 88 -11.7 -3.85698 | opp_overlap 558793 558820 GCAGAATGCAATTTG CAGGAGGCCAG AAAAACC CTGGCCTCCCG TTTGTCCGGCGGGCA Dhaf_0504 558457 - 559176 + | ABC transporter related TERM 776 559652 - 559637 - g 75 -7.6 -4.17048 | CCGGTCGGAAAACAA TGTCAG TATT CTGACA AACCTGATCACCATG Dhaf_0505 559173 - 559889 + | ABC-2 type transporter TERM 777 559983 - 560005 + T 100 -11.2 -4.9792 | opp_overlap 559964 559983 TTGTACGGCAAAAAA CCGGCGGGAA GAT TCCCCGCTGG TTTTTATATACCCTA TERM 778 560005 - 559983 - T 100 -11.2 -5.0538 | opp_overlap 559983, overlap 559964 TTGTACGGCAAAAAA CCGGCGGGAA GAT TCCCCGCTGG TTTTTATATACCCTA Dhaf_0506 560260 - 560018 - | transcriptional regulator, XRE family TERM 779 560307 - 560284 - H 76 -2.5 -5.28983 | CTCAAAAGAGAAAAA CTATCCT TATCATTCAC AGGATAG CAATAAATATTACCA Dhaf_0507 560420 - 560596 + | hypothetical protein TERM 780 560660 - 560701 + T 95 -12.5 -3.33696 | opp_overlap 560674, overlap 560661 560674 GATAATTGTAATTTG GATTGTCCCAAAAACGAAA GCGC TTTCGTTTTTGGGACAGGA TTCGTTGAAAGCGAA TERM 781 560661 - 560700 + T 100 -16 -2.60075 | opp_overlap 560674, overlap 560660 560674 ATAATTGTAATTTGG ATTGTCCCAAAAACGAAA GCGC TTTCGTTTTTGGGACAGG ATTCGTTGAAAGCGA TERM 782 560674 - 560687 + T 70 -5.3 -4.56775 | opp_overlap 560674, overlap 560661 560660 GGATTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACAGGAT TERM 783 560687 - 560674 - T 70 -5.3 -4.57569 | opp_overlap 560674 560661 560660 GGATTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACAGGAT TERM 784 560750 - 560712 - T 91 -11.8 -3.54741 | opp_overlap 560717, overlap 560702 560717 CAGGATTCGTTGAAA GCGAACGCCTGAGGAA GTCAATT CTCCTCAGGCGTTTAC ACTTCACTGTTGCTA TERM 785 560717 - 560745 + T 93 -11.8 -3.67417 | opp_overlap 560712 560717 TTCGTTGAAAGCGAA CGCCTGAGGA AGTCAATTC TCCTCAGGCG TTTACACTTCACTGT TERM 786 560745 - 560717 - T 95 -12.5 -3.27525 | opp_overlap 560717, overlap 560712 TTCGTTGAAAGCGAA CGCCTGAGGAA GTCAATT CTCCTCAGGCG TTTACACTTCACTGT Dhaf_0508 561248 - 560781 - | transcriptional regulator, MarR family Dhaf_0509 561479 - 562057 + | cyclase family protein TERM 787 562065 - 562108 + F 100 -23.6 -3.06815 | opp_overlap 562080, overlap 562067 562080 TGGCCTGATCACCGT GGTTTGTCCCAAAAACGAAA GCGC TTTCGTTTTTGGGACAAATC TATATTAAGGAAGAT TERM 788 562067 - 562106 + F 100 -22.6 -3.09273 | opp_overlap 562080, overlap 562065 562080 GCCTGATCACCGTGG TTTGTCCCAAAAACGAAA GCGC TTTCGTTTTTGGGACAAA TCTATATTAAGGAAG TERM 789 562093 - 562080 - f 70 -5.3 -4.56597 | opp_overlap 562067 562065 562080 GGTTTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACAAATC TERM 790 562080 - 562093 + F 70 -5.3 -4.57073 | opp_overlap 562080, overlap 562067 562065 GGTTTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACAAATC TERM 791 562211 - 562221 + G 77 -8.2 -4.2558 | opp_overlap 562211 TGATTTGCTCACAGA GCGG ACG CCGC TTTTAATCGCAACTG Dhaf_0510 562191 - 563081 + | hypothetical protein Dhaf_0511 563385 - 563206 - | hypothetical protein Dhaf_0512 563870 - 563484 - | response regulator receiver and SARP domain protein TERM 792 563961 - 563914 - H 79 -10.8 -3.08032 | opp_overlap 563914 563928, overlap 563911 GGCTTTGTAAAATGA TCTTAGGACAAATAGTCCTA AATGTCAA TAGGACTTATCGTCCTAAGA TATACTTGCTTTGGT Dhaf_0513 563984 - 564196 + | transcriptional regulator, XRE family TERM 793 564280 - 564318 + T 100 -22.7 -3.92522 | opp_overlap 564280 564288, overlap 564288 ACTGTCTTCTCGAAA GATCAAAACAGCGGGGT ATCAA GCCCCGCTGTTTTGATC TTTATGCACTTCCGA TERM 794 564318 - 564280 - T 100 -22 -3.53091 | opp_overlap 564280 564288, overlap 564288 ACTGTCTTCTCGAAA GATCAAAACAGCGGGG TATCAAG CCCCGCTGTTTTGATC TTTATGCACTTCCGA TERM 795 564288 - 564310 + T 100 -12.7 -4.53036 | opp_overlap 564288 564280, overlap 564280 CTCGAAAGATCAAAA CAGCGGGGT ATCAA GCCCCGCTG TTTTGATCTTTATGC TERM 796 564310 - 564288 - T 100 -12 -4.49756 | opp_overlap 564280 564288, overlap 564280 CTCGAAAGATCAAAA CAGCGGGG TATCAAG CCCCGCTG TTTTGATCTTTATGC Dhaf_0514 565576 - 564413 - | iron-containing alcohol dehydrogenase TERM 797 566630 - 566618 - g 71 -10.5 -2.77523 | TGGTTACCAATATCA GCCCC AGC GGGGC ATCCCTGATTGGACG Dhaf_0515 565912 - 567783 + | GAF modulated sigma54 specific transcriptional regulator, Fis family TERM 798 567836 - 567803 - f 100 -21.3 -2.83343 | opp_overlap 567806 567812, overlap 567806 567812 ACATTCATTAGGAGA CAAGAAAAACCGAGG CTCG CCTCGGTTTTTCTTG ATCATAAAACATAAG TERM 799 567833 - 567806 - f 100 -17.2 -3.56273 | opp_overlap 567806 567812, overlap 567803 567812 TTCATTAGGAGACAA GAAAAACCGAGG CTCG CCTCGGTTTTTC TTGATCATAAAACAT TERM 800 567806 - 567833 + F 100 -17.2 -3.21218 | opp_overlap 567806 567803 567812, overlap 567812 TTCATTAGGAGACAA GAAAAACCGAGG CTCG CCTCGGTTTTTC TTGATCATAAAACAT TERM 801 567812 - 567827 + F 100 -10.4 -5.15167 | opp_overlap 567806 567803 567812, overlap 567806 AGGAGACAAGAAAAA CCGAGG CTCG CCTCGG TTTTTCTTGATCATA TERM 802 567827 - 567812 - f 100 -10.4 -5.25699 | opp_overlap 567812 567806, overlap 567806 567803 AGGAGACAAGAAAAA CCGAGG CTCG CCTCGG TTTTTCTTGATCATA TERM 803 568599 - 568612 + G 77 -4.5 -4.91109 | opp_overlap 568594 GTCTATAGAACTGGG CGGCT CCAG AGCTG TTTTTGTGATCAACG TERM 804 569366 - 569350 - g 87 -6.5 -5.09762 | opp_overlap 569350 569353, overlap 569353 GCCCAACAAACAAAA GAAGCGG CGA CGGCTTC TTCTCAAGGACAGAA Dhaf_0516 568042 - 570036 + | methyl-accepting chemotaxis sensory transducer TERM 805 570183 - 570142 - T 73 -5.7 -4.54727 | opp_overlap 570145, overlap 570143 570145 CCTGCCAAAGGAAAA TTAGCCTGCCGCCAAACGT TTTA ACGTCGAGAGGCAGGCTTT TGGTTCTATACATGG TERM 806 570182 - 570143 - T 74 -9.2 -3.32354 | opp_overlap 570145, overlap 570142 570145 CTGCCAAAGGAAAAT TAGCCTGCCGCCAAACGT TTTA ACGTCGAGAGGCAGGCTT TTGGTTCTATACATG TERM 807 570145 - 570180 + T 78 -7.4 -4.53034 | opp_overlap 570145 570143 570142 GCCAAAGGAAAATTA GCCTGCCGCCAAACGT TTTA ACGTCGAGAGGCAGGC TTTTGGTTCTATACA TERM 808 570180 - 570145 - T 86 -11.8 -3.22314 | opp_overlap 570145, overlap 570143 570142 GCCAAAGGAAAATTA GCCTGCCGCCAAACGT TTTA ACGTCGAGAGGCAGGC TTTTGGTTCTATACA Dhaf_0517 570501 - 570211 - | hypothetical protein Dhaf_0518 571005 - 570622 - | transcriptional regulator, HxlR family Dhaf_0519 571154 - 571633 + | flavodoxin Dhaf_0520 573088 - 571889 - | transposase, IS605 OrfB family Dhaf_0521 573143 - 573883 + | two component transcriptional regulator, winged helix family TERM 809 574874 - 574841 - g 90 -10.2 -4.42974 | overlap 574842 CGCACAGATAAGAAA GCCAGCGGCATAGG GCTCTA CCTCTGCCGCCGGA TCTGCCGCAATCTGG TERM 810 574873 - 574842 - g 88 -13.7 -3.25061 | overlap 574841 GCACAGATAAGAAAG CCAGCGGCATAGG GCTCTA CCTCTGCCGCCGG ATCTGCCGCAATCTG Dhaf_0522 573980 - 574975 + | histidine kinase TERM 811 575003 - 575042 + F 76 -7.9 -4.1899 | opp_overlap 575003 575016 AAAAGTAAGGTTAAA CGGGGAAATGTAAGCCA AAGCCA TGGCGGATATTTCCCTG TTTTGCGTAAACTAG Dhaf_0523 575149 - 575913 + | ABC transporter related Dhaf_0524 575910 - 577940 + | protein of unknown function DUF214 TERM 812 578061 - 578014 - g 71 -8.7 -3.78934 | gap 2, opp_overlap 578014 TTGCCTGGAGAAGAA GAGCGTATCGCCCAATGTTCA GAACCTAA TGAACGTTG-GCG-TACGCTC TTTATTTTAAGCAAA TERM 813 578014 - 578061 + G 100 -10.9 -4.64861 | gap 2, opp_overlap 578014 TTGCCTGGAGAAGAA GAGCGTATCGCCCAATGTTCA GAACCTAA TGAACGTT-GGCG-TACGCTC TTTATTTTAAGCAAA Dhaf_0525 577954 - 578103 + | hypothetical protein Dhaf_0526 578143 - 578532 + | transcriptional regulator, AraC family Dhaf_0527 578552 - 579133 + | Endopeptidase Clp TERM 814 579246 - 579289 + F 100 -19.1 -3.5394 | opp_overlap 579276, overlap 579248 ATAGGGAGTCAGGAT TTGTTCGTCCCGGATTGAA CATGCA TTCAATCCGGGACGAACTG TTTAGGCCACCGTTT TERM 815 579248 - 579287 + F 100 -23.9 -3.34517 | opp_overlap 579276, overlap 579246 AGGGAGTCAGGATTT GTTCGTCCCGGATTGAA CATGCA TTCAATCCGGGACGAAC TGTTTAGGCCACCGT TERM 816 579786 - 579796 + G 82 -5.4 -5.08824 | GGTTTCCTTTACCAT CATC GGC GATG TTTTTTCACTGGCGG Dhaf_0528 579433 - 580887 + | major facilitator superfamily MFS_1 TERM 817 580897 - 580873 - T 75 -2.2 -5.26875 | gap 1 CCTGGAATGAAAAAA GAAAAACAAGC CTGA GCT-GATTTTC ACTGATTGGGCGTAT TERM 818 580934 - 580967 + T 100 -12.5 -4.25104 | opp_overlap 580934 GCAGGAAGTCAGAAA GACAGATACCACGTT TTCC GGCGTGGCATCTGTC TTTTGCTGCACAAGG TERM 819 580967 - 580934 - T 100 -13.3 -3.98826 | opp_overlap 580934 GCAGGAAGTCAGAAA GACAGATACCACG TTTTCCGG CGTGGCATCTGTC TTTTGCTGCACAAGG Dhaf_0529 582743 - 581022 - | methyl-accepting chemotaxis sensory transducer TERM 820 581359 - 581369 + g 71 -8.2 -3.7104 | GTTCCGTGATTCATG GCCG CAA CGGC TTGTTCAGTATCGGT TERM 821 583226 - 583214 - R 72 -6.3 -4.36596 | CCGATAAGCAAGAAA TGCAT CAA ATGCA AAGCAGAGTTAGCGA TERM 822 583327 - 583286 - R 100 -14 -4.83593 | opp_overlap 583289 583292 AATAAGGACTAAAAA CAAGAATAGACAAGGTGA TTTTTT TCTCCTTGTCTATTCTTA TTGATTCGTTACTTG TERM 823 583289 - 583324 + r 100 -13.5 -3.86031 | opp_overlap 583286, overlap 583292 AAGGACTAAAAACAA GAATAGACAAGGTGA TTTTTT TCTCCTTGTCTATTC TTATTGATTCGTTAC TERM 824 583292 - 583321 + r 83 -9.4 -4.04023 | opp_overlap 583286, overlap 583289 GACTAAAAACAAGAA TAGACAAGGTGA TTTTTT TCTCCTTGTCTA TTCTTATTGATTCGT Dhaf_0530 584575 - 583370 - | major facilitator superfamily MFS_1 TERM 825 585393 - 585380 - g 73 -8.1 -4.09509 | opp_overlap 585379 ATGAACCCAGAGAAA TCCGC AAGA GCGGA CTGACTTCCCATCTG TERM 826 585763 - 585777 + G 74 -2.7 -5.0133 | overlap 585764 ATCATCGGCATTAAT CCGGC AGGCC GCCGC TTTTTTCCCACCCTG TERM 827 585906 - 585918 + G 73 -10.5 -3.26921 | overlap 585909 AGTGATTTGTTCCCC GCCGG CCA CCGGC CTTTATTCTGTTCAG TERM 828 585909 - 585919 + G 80 -8.2 -4.46073 | overlap 585906 GATTTGTTCCCCGCC GGCC ACC GGCC TTTATTCTGTTCAGA Dhaf_0531 584905 - 587004 + | sigma54 specific transcriptional regulator, Fis family Dhaf_0532 587879 - 587019 - | methyl-accepting chemotaxis sensory transducer TERM 829 587923 - 587902 - R 71 -9.5 -2.98823 | opp_overlap 587900 CCCTTTTTAGATATA TCGGAAAAG ACAA CCTTTCCGA CGTTAAATTGTGAAT TERM 830 587999 - 588041 + r 83 -9.2 -4.07568 | gap 1, opp_overlap 587999 587996 587994 588002, overlap 588002 TCAGAGTAAACAGAT CAACGAACCGGCCGATATG ATTCAG CA-GTCTGCCGGTTCGTCG TTTTACAGCAAAAGC TERM 831 588002 - 588038 + r 72 -9.5 -3.08032 | gap 1, opp_overlap 588002 587999 587996 587994, overlap 587999 GAGTAAACAGATCAA CGAACCGGCCGATATG ATTCAG CA-GTCTGCCGGTTCG TCGTTTTACAGCAAA Dhaf_0533 588203 - 588069 - | hypothetical protein Dhaf_0534 589402 - 588221 - | hypothetical protein TERM 832 588942 - 588927 - G 71 -6.8 -4.19238 | opp_overlap 588927 TTGGTAAGGTCAAAA TGCCGG AATT CCAGCA TGCTTTGCCGAAGCG TERM 833 589242 - 589223 - G 78 -5.7 -4.70266 | AATATCATCTAAAAA CTGCAGA TATTTT TCCGCAG TGAGCTGAGGATCGT TERM 834 589314 - 589327 + g 76 -2.3 -5.20154 | overlap 589315 CAGTAAGTAAATTCC ATGCC CACC GGCAC TTTTTTGGGTTCTCT Dhaf_0535 590736 - 589510 - | major facilitator superfamily MFS_1 Dhaf_0536 591595 - 590780 - | pyrogallol hydroxytransferase Dhaf_0537 594181 - 591608 - | Pyrogallol hydroxytransferase TERM 835 593213 - 593226 + g 73 -5.2 -4.61199 | GCCACACACGGTTTC CGCC CATTCC GGCG TTTTCTCTATGCCAT TERM 836 593922 - 593901 - G 71 -6.5 -4.25104 | overlap 593905 CCGTTGGGATCAAAA TCCACCCGC TTCA GCGGGTATA AAATACGGTTGGGCG TERM 837 594217 - 594235 + r 100 -10.2 -4.63184 | overlap 594213 ATAAAGATTGAGGCC TGGCGGCC TTT GGCGGCCA TTTTTGCGGTCAGTT Dhaf_0538 594533 - 594195 - | putative oxidoreductase iron-sulfur subunit TERM 838 594425 - 594451 + g 100 -5.1 -5.54079 | overlap 594435 CGAGCTCCAGAAGTT TGATGCCCC ACTGACCCA GGGGCAGCA TTTTTTCATTTTTAC Dhaf_0539 595220 - 594564 - | cobalamin B12-binding domain protein Dhaf_0540 596072 - 595257 - | dihydropteroate synthase DHPS Dhaf_0541 598362 - 596095 - | molybdopterin oxidoreductase TERM 839 596462 - 596452 - G 71 -8.2 -3.74224 | overlap 596453 GTGAAAGGAGGTAAA GCGC CGG GCGC CGGTGGTCATGATCA TERM 840 597288 - 597262 - G 73 -2.3 -5.03314 | overlap 597263 GTCACCCGCAAAAAA GGTCGG-CTGTCC CAT GAACAAACCG-CC GGGAATATCCAGGTT TERM 841 598325 - 598335 + g 70 -2.4 -4.87291 | overlap 598311 GCCAGCTCGGTCACA GCCG GGG CGGA TTTTTCGTTCCAATG TERM 842 598684 - 598664 - H 75 -2.4 -5.27335 | overlap 598665 598666 TTTTGGAAATAAAAA GGGCCCTG AGAAA CAGGGCTG AAGTTTGATTTATTG TERM 843 598682 - 598666 - H 70 -9.4 -2.84684 | overlap 598665 598664 TTGGAAATAAAAAGG GCCCTG AGAAA CAGGGC TGAAGTTTGATTTAT TERM 844 599710 - 599699 - g 80 -7.2 -4.58395 | overlap 599700 TGTAGGGGGGAAAAA CCGC CGGG GCGG GGGAGCTGTACCGTA Dhaf_0542 598877 - 600433 + | hypothetical protein TERM 845 600466 - 600519 + F 100 -16.1 -5.1287 | opp_overlap 600469, overlap 600467 600469 CCAAACCGATACGGA AAAGCAAAGAGATAGGCACTGCCTC TTGC GGGACAGCGCCTATCTCTTTGCTGA TTTTTTGAATATACG TERM 846 600467 - 600518 + F 100 -19.6 -3.66999 | opp_overlap 600469, overlap 600466 600469 CAAACCGATACGGAA AAGCAAAGAGATAGGCACTGCCTC TTGC GGGACAGCGCCTATCTCTTTGCTG ATTTTTTGAATATAC TERM 847 600516 - 600469 - f 100 -24.4 -4.24606 | opp_overlap 600467 600466 600469 AACCGATACGGAAAA GCAAAGAGATAGGCACTGCCTC TTGC GGGACAGCGCCTATCTCTTTGC TGATTTTTTGAATAT TERM 848 600469 - 600516 + F 100 -22.2 -3.40444 | opp_overlap 600469, overlap 600467 600466 AACCGATACGGAAAA GCAAAGAGATAGGCACTGCCTC TTGC GGGACAGCGCCTATCTCTTTGC TGATTTTTTGAATAT TERM 849 600870 - 600883 + G 80 -3.1 -5.41143 | opp_overlap 600882 TCTTTAGAGCTGGCC TTTGC TATA GCAGA TTTTTTTGAAAAGTC Dhaf_0543 600735 - 600950 + | transcriptional regulator, XRE family TERM 850 601061 - 601075 + G 73 -10 -3.44229 | TTGCCGGTGGTTTAA TCGCTC CCG GAGCGA TTATGATCATCAAAT Dhaf_0544 600937 - 601380 + | hypothetical protein TERM 851 603075 - 603041 - g 80 -7 -4.57569 | opp_overlap 603071 CTATCGCTTGAAAAA GGCTGCCGAGGTCCTG GAT CGGGATCTGAACAGCC TGGAAACCCGGATGA Dhaf_0545 601500 - 603143 + | transcriptional regulator, CdaR TERM 852 603160 - 603185 + F 100 -12.7 -5.55001 | gap 1, opp_overlap 603152 GACAAATCCTTGGAA CCCTTGCACCTC ATG GAG-TGCAAGGG TTTTGTTTTTTATTA TERM 853 603664 - 603654 - g 73 -5.4 -4.65895 | CTGGTCATGCAAAAA TCCA CCT TGGA CGTTCGCCGCTGGTA Dhaf_0546 603309 - 603968 + | cytoplasmic chaperone TorD family protein Dhaf_0547 604012 - 606210 + | molybdopterin oxidoreductase Dhaf_0548 606225 - 606794 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_0549 606794 - 607648 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 854 607667 - 607702 + F 77 -10.5 -3.16217 | gap 1, opp_overlap 607667 607665, overlap 607665 607663 607659 TCTTAAATTTAAACA CCCTGGGCTCTTCACT CTTGA GGTG-AGGGTCCAGGG TATCTTAACTTTGAA TERM 855 609202 - 609216 + G 73 -10 -3.37761 | ACATTGGGACCTTCA TGCCAG CTA CTGGCA TTACTATATTGGGAT Dhaf_0550 607916 - 609958 + | Nitrate reductase TERM 856 609963 - 609948 - f 77 -4.6 -4.98255 | overlap 609951 TCGGAATCAGAAAAA CCACCT CATG AGGAGG GAAAACATGGCCAAA Dhaf_0551 609970 - 610527 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 857 610607 - 610563 - T 91 -10.3 -4.18058 | gap 1, opp_overlap 610568, overlap 610568 AATCAGAGGCCAAAA CAAAAGCCCAG-TCTTTGTA GAAAAT TACAAAGAACCGGGCTTTTT TTTGTAGATATTTAC TERM 858 610568 - 610602 + T 100 -8.7 -5.96219 | gap 1, opp_overlap 610563 610568 GAGGCCAAAACAAAA GCCCAG-TCTTTGTAG AAAA TTACAAAGAACCGGGC TTTTTTTTGTAGATA TERM 859 610602 - 610568 - T 100 -10.2 -5.09259 | gap 1, opp_overlap 610568, overlap 610563 GAGGCCAAAACAAAA GCCCAG-TCTTTGTA GAAAAT TACAAAGAACCGGGC TTTTTTTTGTAGATA Dhaf_0552 612258 - 610717 - | transcriptional regulator, CdaR TERM 860 611183 - 611170 - G 74 -3.1 -5.07486 | GATGGTTAAGAAAAA CTTCC TGAC GAAAG AGGCCAGCCTGGCCC TERM 861 611197 - 611185 - G 71 -9.1 -3.44848 | overlap 611183 CTTCCTGACGAAAGA GGCCA GCC TGGCC CGCAAATCTTCCCGG Dhaf_0553 612545 - 613111 + | GTP cyclohydrolase I Dhaf_0554 613152 - 614057 + | formate/nitrite transporter TERM 862 615608 - 615593 - g 77 -4.6 -4.93296 | overlap 615562 615595 CGATGATCAGAAAAA GCTGGG ACGT CCCACC GGCTTCAGAATATCC TERM 863 615642 - 615655 + G 72 -5.9 -4.3467 | opp_overlap 615642, overlap 615643 CGCAGTGTCAAAGTA TCGGC AGGG GCCGG TTTTGCTGTGGCCCT Dhaf_0555 614091 - 615767 + | Formate--tetrahydrofolate ligase Dhaf_0556 616172 - 616810 + | Formiminotransferase-cyclodeaminase Dhaf_0557 616807 - 617652 + | Methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 864 617711 - 617735 + F 91 -8.5 -4.72272 | opp_overlap 617711 617713 TCGTGTTTGTAAAAA GGGAGCATGCT TGC GGCAAGCTCTC TTTTTACTAGGCGCC TERM 865 617735 - 617711 - f 73 -5.6 -4.56597 | opp_overlap 617711, overlap 617713 TCGTGTTTGTAAAAA GGGAGCATGC TTGCG GCAAGCTCTC TTTTTACTAGGCGCC TERM 866 618678 - 618650 - g 82 -5.2 -5.03145 | overlap 618653 GAACGGCTGAAAAAA CATCCCAGCATC AGTGA GGTGCTGGACTG GGTCAACATCCTTAA TERM 867 618812 - 618792 - g 83 -4 -5.43487 | opp_overlap 618796, overlap 618796 AAATCAGAGAAAAAA TAAACCAG AAGGA CTGGTTTG ATGGAATATTTACTG TERM 868 618808 - 618796 - g 80 -4.8 -5.16969 | opp_overlap 618796, overlap 618792 CAGAGAAAAAATAAA CCAG AAGGA CTGG TTTGATGGAATATTT Dhaf_0558 617831 - 618832 + | AAA ATPase TERM 869 618983 - 618973 - g 80 -8.2 -4.32034 | overlap 618974 CCACCATGATCAAAA CCCC CTG GGGG GCGGAATTTGTGCTC TERM 870 619635 - 619612 - g 74 -9.5 -3.53012 | GGCGGGCCCTGCAAA CCGGCGGCA TCCCCC TGGCGCCGG TACGGGTGCGCCGCA Dhaf_0559 618813 - 620174 + | VWA containing CoxE family protein Dhaf_0560 620409 - 620215 - | hypothetical protein Dhaf_0561 621977 - 620481 - | protein of unknown function DUF21 TERM 871 621983 - 621939 - G 100 -11 -5.42862 | opp_overlap 621941 ATAGCCGTAAAAAAA TACACAACAATAAGGACAAT GTAAA ATTGCCCATATCATTGTGTA ATATCCTTGCATAGA Dhaf_0562 623464 - 622172 - | hypothetical protein Dhaf_0563 623942 - 623451 - | RNA polymerase, sigma-24 subunit, ECF subfamily Dhaf_0564 624141 - 624383 + | hypothetical protein TERM 872 624465 - 624432 - f 81 -7.5 -4.65153 | opp_overlap 624432, overlap 624427 TGACACAAAGGAAAA CCTTATTCAAAGAGC TTAG ACTCGGTGAATAAGG TTTTTTATTTGGGGC TERM 873 624432 - 624465 + F 100 -6.8 -5.63517 | opp_overlap 624427 624432 TGACACAAAGGAAAA CCTTATTCAAAGAG CTTAGA CTCGGTGAATAAGG TTTTTTATTTGGGGC TERM 874 624886 - 624859 - g 76 -7 -4.46112 | TTGCAGGGAAACAAA TCAAACTCGAGC ATGT GGACGAGTTTGA GGAGCCGCGGGATAT Dhaf_0565 624621 - 624971 + | hypothetical protein TERM 875 625552 - 625516 - T 100 -18.3 -3.9642 | opp_overlap 625521, overlap 625521 AAAGACTTAATTAAA CAAAATCAACATACCCC TTG GGGGTATGTTGATTTTT TATTCGTTCACCATT TERM 876 625521 - 625547 + T 100 -18.2 -5.5604 | opp_overlap 625521 625516 CTTAATTAAACAAAA TCAACATACCCC TTG GGGGTATGTTGA TTTTTTATTCGTTCA TERM 877 625547 - 625521 - T 100 -18.2 -4.99947 | opp_overlap 625521, overlap 625516 CTTAATTAAACAAAA TCAACATACCCC TTG GGGGTATGTTGA TTTTTTATTCGTTCA Dhaf_0567 626466 - 625624 - | diguanylate cyclase TERM 878 627471 - 627509 + G 81 -12.6 -2.8474 | overlap 627468 AGCGGTTCCAGGATG TGGCCTCTTCCCTC-GCT GATTG GGCTGAGGGAAG-GGCCA TGATTCTGGATGGGG TERM 879 629075 - 629019 - g 81 -10.9 -3.7732 | gap 1, overlap 629020 CCCTGAGAGCAAGAA GGGGAGCCAAGGTATCCATGCCCATC ACTTGG GAGGAGC-TGGATACAGTGGCTCCCG ACGGTGTGGATATGG TERM 880 629074 - 629020 - g 88 -14.4 -2.86071 | gap 1, overlap 629019 CCTGAGAGCAAGAAG GGGAGCCAAGGTATCCATGCCCATC ACTTGG GAGGAGC-TGGATACAGTGGCTCCC GACGGTGTGGATATG TERM 881 629123 - 629134 + G 75 -5.8 -4.58395 | ATCCAGGACAGTGAT CCCT GGGA AGGG TTTTTCCGGAATCAG Dhaf_0568 626708 - 629164 + | DNA ligase D Dhaf_0569 629322 - 629585 + | prevent-host-death family protein TERM 882 629770 - 629745 - g 71 -4 -4.69664 | GAGATCAGGCAAAAA TGCGGCAATT TACGGC AACTGCCTCA TCAGGAGCGAATCGT Dhaf_0570 629619 - 629945 + | plasmid stabilization system TERM 883 630035 - 630017 - f 80 -8.9 -3.93061 | AGCTGAAAATTGAAA CCGTGAT TTATC ATCACGG GCAGATGAACCCCAT TERM 884 630040 - 630074 + F 89 -7.2 -5.01811 | opp_overlap 630045, overlap 630041 630042 TATCATCACGGGCAG ATGAACCCCATGAG CAAAGAA TTCATGGGGTTCGC TTTTTGCTTTAATCA TERM 885 630041 - 630073 + F 84 -10.7 -3.60002 | opp_overlap 630045, overlap 630040 630042 ATCATCACGGGCAGA TGAACCCCATGAG CAAAGAA TTCATGGGGTTCG CTTTTTGCTTTAATC TERM 886 630042 - 630072 + F 83 -12 -2.74917 | opp_overlap 630045, overlap 630041 630040 TCATCACGGGCAGAT GAACCCCATGAG CAAAGAA TTCATGGGGTTC GCTTTTTGCTTTAAT TERM 887 631180 - 631168 - g 73 -7.7 -4.13767 | opp_overlap 631132 CCGCCCATGGCAAAA GTCTG CTC CAGAC CATCGATGGCTTCTT TERM 888 631481 - 631469 - g 76 -9.1 -3.88787 | opp_overlap 631468 631473, overlap 631459 TGACAGCGCCACAAA GCTGC CGC GCAGC GATTATCCTTTGCAG Dhaf_0571 630249 - 632036 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 889 632125 - 632151 + T 100 -10.9 -5.14563 | overlap 632126 AAAAAGGATCTTTCA GCGGACTCTGT TAAAT ACAGAGTCCGG TTTTTTAATGCGGCG TERM 890 632126 - 632150 + T 100 -14.4 -3.68256 | overlap 632125 AAAAGGATCTTTCAG CGGACTCTGT TAAAT ACAGAGTCCG GTTTTTTAATGCGGC Dhaf_0572 633139 - 632246 - | transcriptional regulator, LysR family TERM 891 632456 - 632472 + g 71 -3 -4.90869 | gap 1 AATCATATCCAAGGC CAG-GGA TGTG TCCGCTG TTTTTACTTCGTAAT TERM 892 632727 - 632709 - G 74 -8.9 -3.70902 | opp_overlap 632701 632711 GTGTTGATATGGAAA CAGGTCT CAACC AGACCTG CTTCGAGATATTCCT Dhaf_0573 634106 - 633195 - | transcriptional regulator, LysR family TERM 893 633546 - 633566 + g 83 -3.9 -5.40072 | overlap 633564 GCATTTTTCACCGGC CAGATCCTC GAT GCCGATCTG TTTTTTTCGGGAAAA TERM 894 634740 - 634760 + G 77 -10.3 -3.56092 | GAGGTGGTGGTCATT GGCGCCGGG ACC TCCGGCACC TTTGCCGCCTGCTCA TERM 895 635435 - 635418 - g 71 -8.3 -3.74693 | GGCCAGGGGATCAAA GCCTGCC TGTG GGCCGGC GGCATAATGGATGAG TERM 896 635488 - 635452 - g 76 -11.5 -2.83905 | overlap 635443 GCATAATGGATGAGA CCCACGCAGGCATGATC TTT GACCGGGCCTGCGTGAA GCCTGATGCCTCCGG TERM 897 636065 - 636051 - g 70 -7.8 -3.92641 | overlap 636039 636038 AACGCCATCGATAAA GACGGC AAC GCCATC GAAGGCCTGTACGTT Dhaf_0574 634233 - 636206 + | FMN-binding domain protein TERM 898 636256 - 636310 + T 82 -6.6 -4.8048 | opp_overlap 636263 636270, overlap 636263 ATCAAAATAATGACC AATTAAAGACCAAACCGCTTTCAA ACAAGAC TTAGAAGCGGTTTGGTCTTTCTTC TTTTTGATATCCAAC TERM 899 636263 - 636303 + T 100 -13.5 -4.78157 | opp_overlap 636263 636270, overlap 636256 TAATGACCAATTAAA GACCAAACCGCTTTCAA ACAAGAC TTAGAAGCGGTTTGGTC TTTCTTCTTTTTGAT TERM 900 636303 - 636263 - T 100 -14.9 -3.98113 | opp_overlap 636263 636256, overlap 636270 TAATGACCAATTAAA GACCAAACCGCTTTCAAAC AAG ACTTAGAAGCGGTTTGGTC TTTCTTCTTTTTGAT Dhaf_0575 636418 - 636287 - | hypothetical protein Dhaf_0576 636615 - 636499 - | hypothetical protein Dhaf_0577 636892 - 636602 - | addiction module antitoxin, RelB/DinJ family Dhaf_0578 637166 - 638107 + | hypothetical protein Dhaf_0579 638100 - 639194 + | hypothetical protein TERM 901 639545 - 639528 - g 74 -6.9 -4.32046 | overlap 639529 TGGTCAAAAATGAAA TCACGGC TCAC GCCGTGG GAACCCTGTCCGTGT TERM 902 639544 - 639529 - g 73 -10.4 -3.18505 | overlap 639528 GGTCAAAAATGAAAT CACGGC TCAC GCCGTG GGAACCCTGTCCGTG TERM 903 639934 - 639911 - g 73 -8 -3.97308 | GGCAAACACACCAAA GCCCCCATCG TCTT CCAGGGGGGC GTCAGCAAAAATGTT Dhaf_0580 639176 - 640279 + | CoA-substrate-specific enzyme activase TERM 904 640333 - 640352 + F 100 -9.2 -4.92385 | overlap 640334 GTGAGTTATAGAGGG CGCCGGCA AAAA TGCCGGCA TTTTCTTTACGTATC TERM 905 640334 - 640351 + F 100 -12.7 -3.54346 | overlap 640333 TGAGTTATAGAGGGC GCCGGCA AAAA TGCCGGC ATTTTCTTTACGTAT Dhaf_0581 640820 - 643390 + | molybdopterin oxidoreductase Dhaf_0582 643395 - 644210 + | Cna B domain protein TERM 906 644267 - 644227 - f 75 -9 -3.61398 | gap 2, opp_overlap 644223, overlap 644228 644231 CCGTTGTGGGAATAA GGAACGGATGGCGGATCGTC ATT GGCAATCCGCCG-CCG-TCC ATCAAATTGTTTCCG TERM 907 644267 - 644228 - f 81 -11.4 -2.76696 | gap 1, opp_overlap 644223, overlap 644227 644231 CGTTGTGGGAATAAG GAACGGATGGCGGATCGTC ATT GGCAATCCGCCG-CCGTCC ATCAAATTGTTTCCG TERM 908 644264 - 644231 - f 76 -9.5 -3.53444 | gap 1, opp_overlap 644223, overlap 644227 644228 TGTGGGAATAAGGAA CGGATGGCGGATCGTC ATT GGCAATCCGCCG-CCG TCCATCAAATTGTTT Dhaf_0583 644402 - 644683 + | hypothetical protein Dhaf_0584 644697 - 645068 + | hypothetical protein TERM 909 645127 - 645154 + F 90 -10.7 -4.07246 | ACATAGTTATACTTA CTACAGGTGGA GTTTTA TCCATCTGTAG TTTAGTTTGACCTCA TERM 910 646912 - 646900 - g 91 -4.1 -5.63517 | opp_overlap 646901 646907, overlap 646901 TGGTGAAAGAAAAAA CCTTC CGC GAAGA TTTGTATTTTCGGTT Dhaf_0585 645306 - 647369 + | sigma54 specific transcriptional regulator, Fis family TERM 911 647386 - 647407 + F 90 -5.9 -5.44119 | opp_overlap 647390 TTGATGGTATTTAAA TAAGCCTGA CACA TCGGGTTTA TTTTTTTGCCATAAA TERM 912 648730 - 648718 - g 71 -9.1 -3.58037 | overlap 648709 GAGCAACCGGTGAAA CCGGT GCT ACCGG CACATTCGAGCCTAA Dhaf_0586 647625 - 649445 + | Collagen triple helix repeat protein TERM 913 649471 - 649501 + F 100 -14.7 -5.47218 | opp_overlap 649471 TTCCTATCGCACAAA GCAGGACCATCCG CCAAA CGGGTGGCCCTGC TTTTTTTAGGTACAG TERM 914 649501 - 649471 - f 100 -15.4 -3.89346 | opp_overlap 649471 TTCCTATCGCACAAA GCAGGACCATCCGC CAA ACGGGTGGCCCTGC TTTTTTTAGGTACAG Dhaf_0587 649544 - 649849 + | PilT protein domain protein TERM 915 649960 - 650003 + F 100 -16.3 -3.39142 | opp_overlap 649960 649963, overlap 649963 TCATATTAAATTAAA GAGGCCAATCCAATATCAT CGGCAC ATGATATCGGATTGGCTTC TTGGTTGCCTCTGAA TERM 916 650003 - 649960 - f 100 -16.3 -4.12738 | opp_overlap 649960 649963, overlap 649963 TCATATTAAATTAAA GAGGCCAATCCAATATCAT CGGCAC ATGATATCGGATTGGCTTC TTGGTTGCCTCTGAA TERM 917 650000 - 649963 - f 100 -16.6 -2.78002 | opp_overlap 649960 649963, overlap 649960 TATTAAATTAAAGAG GCCAATCCAATATCAT CGGCAC ATGATATCGGATTGGC TTCTTGGTTGCCTCT TERM 918 649963 - 650000 + F 100 -14.4 -3.83006 | opp_overlap 649963 649960, overlap 649960 TATTAAATTAAAGAG GCCAATCCAATATCAT CGGCAC ATGATATCGGATTGGC TTCTTGGTTGCCTCT TERM 919 650720 - 650696 - g 71 -6.5 -4.18213 | AAGGACAAAGAAGAA TTTAGGGCAAA GGA TTTTCCCCAAA GTTGCCTTTTTGGAC Dhaf_0588 650217 - 651323 + | iron-containing alcohol dehydrogenase Dhaf_0589 652406 - 651363 - | hypothetical protein TERM 920 651761 - 651795 + g 74 -2.7 -5.0916 | opp_overlap 651761, overlap 651791 TATCCGCAAGATAAA CACGGTTGATCTGCA CCCAA TGCTTTTCACCCGTG TTTTTATCTTGAAAA TERM 921 651934 - 651896 - G 76 -11.1 -3.17075 | gap 1, opp_overlap 651885 651895 CCCGCCGGAAGGTAA GCTGCACTGCCGGATTTT CACC AACATCCGGCAG-GCAGT CATAGTCTCCCGAAA TERM 922 652179 - 652193 + g 71 -4.2 -4.72272 | ACCGCGCAGGCGCTC CCGG TTAGTTT CCGG TTTTTCATGCAGCCC Dhaf_0590 652709 - 652915 + | hypothetical protein Dhaf_0591 652965 - 653654 + | zinc finger CDGSH-type domain protein Dhaf_0592 653697 - 654026 + | Protein of unknown function CGGC region TERM 923 654117 - 654096 - T 90 -7.3 -5.08178 | opp_overlap 654096 ATAGACACAGAAAAA GCCATTGAT GAAA ATCAGTGGC TTTAAAATGACTTAA TERM 924 654096 - 654117 + T 78 -9.5 -3.6215 | opp_overlap 654096 ATAGACACAGAAAAA GCCATTGAT GAAA ATCAGTGGC TTTAAAATGACTTAA Dhaf_0593 654431 - 654165 - | transcriptional modulator of MazE/toxin, MazF Dhaf_0594 654610 - 654416 - | hypothetical protein Dhaf_0595 655433 - 654789 - | hypothetical protein Dhaf_0596 656294 - 655461 - | O-methyltransferase domain protein TERM 925 656416 - 656385 - R 100 -14.6 -4.03413 | opp_overlap 656385 ATGCTGTCATAGAAA TAGGATCGGTTAGC AATT GCTAACTGATCCTA TTTTAACAAGGAAGA TERM 926 656385 - 656416 + r 100 -16.8 -4.07568 | opp_overlap 656385 ATGCTGTCATAGAAA TAGGATCGGTTAGC AATT GCTAACTGATCCTA TTTTAACAAGGAAGA TERM 927 656641 - 656604 - R 100 -11.3 -5.24003 | opp_overlap 656604 AATAAAAACTAAAAA CCGCCAAGGCAGAGACG AATA CCTCTGTGCCTTAACGG TTTTTCCTTAACTAA TERM 928 656604 - 656641 + r 82 -6.9 -4.88407 | opp_overlap 656604 AATAAAAACTAAAAA CCGCCAAGGCAGAGACG AATA CCTCTGTGCCTTAACGG TTTTTCCTTAACTAA Dhaf_0597 656962 - 656705 - | hypothetical protein Dhaf_0598 657239 - 656931 - | hypothetical protein TERM 929 657453 - 657490 + r 81 -5.5 -5.0925 | opp_overlap 657453 657445 657464, overlap 657462 ATGAAAAGAAAAGAA CCGTCAAGGCAGAGGCG AATA CCTCTGTGCTTTAACGG TTTTTCCTTTTGCCG Dhaf_0599 657739 - 657518 - | transcriptional regulator, XRE family TERM 930 657805 - 657770 - H 77 -10.6 -3.20703 | opp_overlap 657767 657763 657775 657798 657799 657801, overlap 657799 ATAATTATGCAGTAA GGGGATATCCCTTA TTGACTTT TAAGGGATATTCCC TTAAAATTGAGGGGA Dhaf_0600 657849 - 658046 + | hypothetical protein TERM 931 658078 - 658109 + F 100 -10.3 -4.32201 | opp_overlap 658078 TCAATCACAAAAAAA GCTTCTCTAAGAG CTGAAC TTCTTGGAGAAGC TTTTAAATTAGTTAA TERM 932 658109 - 658078 - f 100 -7.4 -5.71983 | gap 1, opp_overlap 658078 TCAATCACAAAAAAA GCTTCTCTAAG-AGC TGA ACTTCTTGGAGAAGC TTTTAAATTAGTTAA Dhaf_0601 658285 - 658458 + | hypothetical protein TERM 933 658583 - 658528 - T 100 -12.3 -3.93638 | gap 1, opp_overlap 658536 658544 658547, overlap 658532 658534 658536 AATCAACTGGATAAA GGAACACATTAGAGAATAAGACTTGG TTATG CCAAGTCTTATTCTCTAAT-TATAAC GAAACTGCTGCTCGG TERM 934 658579 - 658532 - T 100 -16.1 -3.61646 | gap 1, opp_overlap 658536 658544 658547, overlap 658528 658534 658536 AACTGGATAAAGGAA CACATTAGAGAATAAGACTTGG TTATG CCAAGTCTTATTCTCTAAT-TA TAACGAAACTGCTGC TERM 935 658578 - 658534 - T 100 -19 -3.37915 | opp_overlap 658536 658544 658547, overlap 658532 658528 658536 CTGGATAAAGGAACA CATTAGAGAATAAGACTTGG TTATG CCAAGTCTTATTCTCTAATT ATAACGAAACTGCTG TERM 936 658536 - 658576 + T 100 -22.3 -3.29144 | opp_overlap 658536 658534 658532 658528, overlap 658544 658547 GGATAAAGGAACACA TTAGAGAATAAGACTTGGT TAT GCCAAGTCTTATTCTCTAA TTATAACGAAACTGC TERM 937 658576 - 658536 - T 100 -21.6 -3.25317 | opp_overlap 658536 658544 658547, overlap 658534 658532 658528 GGATAAAGGAACACA TTAGAGAATAAGACTTGG TTATG CCAAGTCTTATTCTCTAA TTATAACGAAACTGC TERM 938 658544 - 658568 + T 100 -12.3 -3.62644 | opp_overlap 658536 658534 658532 658528, overlap 658536 658547 GAACACATTAGAGAA TAAGACTTGGT TAT GCCAAGTCTTA TTCTCTAATTATAAC TERM 939 658547 - 658565 + T 83 -9.6 -3.93719 | opp_overlap 658536 658534 658532 658528, overlap 658544 658536 CACATTAGAGAATAA GACTTGGT TAT GCCAAGTC TTATTCTCTAATTAT Dhaf_0602 659987 - 658680 - | acetyl-CoA acetyltransferase Dhaf_0603 661310 - 660006 - | acetyl-CoA hydrolase/transferase TERM 940 660485 - 660514 + g 77 -6.4 -4.59853 | TATAGTCGTAAACCC TCTTCGTCCCCT GGGCAA AGGTGACGACGA TTTTTCCCGGATTCA TERM 941 661567 - 661552 - H 71 -3.4 -5.02074 | opp_overlap 661552 GTATTGTTCAAAAAA TTATAA TCAC TTATAA TTGATTTATAGTGAT TERM 942 662362 - 662345 - g 71 -4 -4.72272 | TTTGGTTATGAAAAA GGCTCC TTTACC GGCGCC GATGCCAAAGGAAAA Dhaf_0604 661661 - 663091 + | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 943 663157 - 663116 - T 85 -9.5 -4.10566 | opp_overlap 663120, overlap 663118 663120 ATCGAAGAACAAGAA GAGAGGACCGTGTGAAAAT CTTA ATTTTCTCACGGCCCTTTA TCATTAAGGGGGGCT TERM 944 663155 - 663118 - T 93 -12.1 -3.63645 | opp_overlap 663120, overlap 663116 663120 CGAAGAACAAGAAGA GAGGACCGTGTGAAAAT CTTA ATTTTCTCACGGCCCTT TATCATTAAGGGGGG TERM 945 663120 - 663153 + T 100 -12.5 -4.05446 | opp_overlap 663118 663116 663120 AAGAACAAGAAGAGA GGACCGTGTGAAAAT CTTA ATTTTCTCACGGCCC TTTATCATTAAGGGG TERM 946 663153 - 663120 - T 100 -14.7 -3.37765 | opp_overlap 663120, overlap 663118 663116 AAGAACAAGAAGAGA GGACCGTGTGAAAAT CTTA ATTTTCTCACGGCCC TTTATCATTAAGGGG Dhaf_0605 663851 - 663237 - | transcriptional regulator, TetR family Dhaf_0606 663992 - 664879 + | DegV family protein TERM 947 665165 - 665180 + G 83 -6.8 -5.00267 | TATGATTGCGGGAGT GAGCGG AGAA CTGCTC TTTATTTTTCTGGTT Dhaf_0607 664872 - 665525 + | hypothetical protein TERM 948 665537 - 665575 + F 100 -16.8 -4.14764 | opp_overlap 665537 665539 ATAATCATTAAAAAA GGCGTCCTGCCTCCACTA TTA TAGTGAAGGGAGGACGTC TTTGGTTATTTGCAC TERM 949 665575 - 665537 - f 100 -16.8 -5.22794 | opp_overlap 665537, overlap 665539 ATAATCATTAAAAAA GGCGTCCTGCCTCCACTA TTA TAGTGAAGGGAGGACGTC TTTGGTTATTTGCAC TERM 950 665573 - 665539 - f 100 -18 -2.82145 | opp_overlap 665537, overlap 665537 AATCATTAAAAAAGG CGTCCTGCCTCCACTA TTA TAGTGAAGGGAGGACG TCTTTGGTTATTTGC TERM 951 665836 - 665851 + F 77 -4.7 -4.96646 | opp_overlap 665808 665807, overlap 665811 AAGCTGAAAACCTCC GCATG ATCTGG CATGC TTTTTGCTTGTATAA Dhaf_0608 665937 - 666680 + | short-chain dehydrogenase/reductase SDR TERM 952 666708 - 666684 - f 71 -9.9 -2.62265 | overlap 666683 666681 ATCTACAGATAAGAG GTCAGCCCGGC AGG GCCGGGGTGAA GACATGAACAGCGGG TERM 953 666775 - 666793 + G 77 -10.2 -3.55071 | overlap 666776 CGGTTCGTACCCCCA TCGCCTCC TTC GGAGGCGC TTTGCAGGGGTATGG TERM 954 666776 - 666792 + G 84 -13.7 -2.72829 | overlap 666775 GGTTCGTACCCCCAT CGCCTCC TTC GGAGGCG CTTTGCAGGGGTATG TERM 955 667466 - 667449 - g 71 -2.6 -5.00616 | overlap 667434 667451 CCGGCCTTTAAAAAA GACGGC ACGGTA ACCGCC GGCAATGCTTCCGGT TERM 956 667886 - 667896 + G 73 -8.2 -3.79113 | overlap 667878 CATCGGCGGCGGGCA GGGC ATC GCCC TTGTTGTCGAGGGCT Dhaf_0609 666735 - 667913 + | acetyl-CoA acetyltransferase TERM 957 668588 - 668604 + G 100 -11.5 -4.56597 | CAATCTGTTGGCCAT GCCCCTG GCC CGGGGGC TTTTTCACAAAGCCA TERM 958 668638 - 668616 - g 85 -11.2 -3.85698 | GGGCTTTTTCACAAA GCCATCCTGC AGA GCGGGACGGC CCGCTGTAAAGTAAC Dhaf_0610 667974 - 669494 + | Carboxylesterase type B Dhaf_0611 669579 - 671162 + | extracellular solute-binding protein family 5 TERM 959 671178 - 671205 + F 81 -11.4 -2.74605 | opp_overlap 671178 671176, overlap 671175 671183 TCTGTAGTTGAAATA GTGAAGTGGGAT TTCG ATCCTGCTTCAC TCCATTTTAAAGGAG TERM 960 671642 - 671661 + G 93 -6.4 -5.40625 | CGCTTTTTAGGCACC TTGGGCAC GGCG GTACCCAA TTTTTTATGTGCTAT TERM 961 671716 - 671728 + G 82 -10.5 -3.89614 | AAACCTGAATTGGCT GCCGG CCA CCGGC TTTATCAGCATTACC Dhaf_0612 671228 - 672172 + | binding-protein-dependent transport systems inner membrane component Dhaf_0613 672186 - 673028 + | binding-protein-dependent transport systems inner membrane component TERM 962 673909 - 673859 - gf 73 -9.7 -2.94032 | gap 2, opp_overlap 673858 673899, overlap 673858 ACCCTCCAAGGAAAC CCTGGACGCCATTCCGGGGG--TGG TGC CCAATCCCCTGGAACTGCCCCCAGG CTGTAATTTCGTGAC Dhaf_0614 673044 - 674081 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 963 674104 - 674086 - gT 100 -11 -5.15634 | opp_overlap 674091 CAGGGCATTAAAAAA CACTTCCC GGT GGGAAGCG GGCTTTTCGGCCAAA Dhaf_0615 674041 - 675024 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 964 675065 - 675090 + T 100 -14.7 -4.25104 | opp_overlap 675066 675069, overlap 675066 ATACCGCAGCCATAA AGAACCCCGCG CAAC CGCGGGGTTCA TTTTCGTGGCGCACC TERM 965 675066 - 675089 + T 100 -18.2 -3.14848 | opp_overlap 675066 675069, overlap 675065 TACCGCAGCCATAAA GAACCCCGCG CAAC CGCGGGGTTC ATTTTCGTGGCGCAC TERM 966 675089 - 675066 - T 100 -18.2 -3.92373 | opp_overlap 675065 675066, overlap 675069 TACCGCAGCCATAAA GAACCCCGCG CAAC CGCGGGGTTC ATTTTCGTGGCGCAC TERM 967 675086 - 675069 - T 100 -14.1 -4.09117 | opp_overlap 675066 675065, overlap 675066 CGCAGCCATAAAGAA CCCCGCG CAAC CGCGGGG TTCATTTTCGTGGCG Dhaf_0616 676061 - 675153 - | transcriptional regulator, LysR family Dhaf_0617 676266 - 678320 + | type I phosphodiesterase/nucleotide pyrophosphatase Dhaf_0618 678399 - 680348 + | TRAP transporter, 4TM/12TM fusion protein TERM 968 680671 - 680661 - g 80 -8.2 -4.34402 | GTCCGCAGATTAAAA GCGG AAA CCGC AGATATCGGCATGGC Dhaf_0619 680382 - 681395 + | TRAP transporter solute receptor, TAXI family TERM 969 681431 - 681482 + T 80 -9 -4.03234 | gap 2, opp_overlap 681435 681438, overlap 681435 681437 681438 GGGAAAGCATGCTGA CAAAGGATTTGCCGGAAGTGCTTC GCAAAA GAAGTGCTTCCGGCAAA-C-TATG TTTGTATCCAAAACC TERM 970 681435 - 681480 + T 80 -9.8 -3.61232 | opp_overlap 681435 681438, overlap 681431 681437 681438 AAGCATGCTGACAAA GGATTTGCCGGAAGTGCTTC GCAAAA GAAGTGCTTCCGGCAAACTA TGTTTGTATCCAAAA TERM 971 681437 - 681478 + T 100 -14.6 -3.38294 | opp_overlap 681435 681438, overlap 681435 681431 681438 GCATGCTGACAAAGG ATTTGCCGGAAGTGCTTC GCAAAA GAAGTGCTTCCGGCAAAC TATGTTTGTATCCAA TERM 972 681477 - 681438 - T 100 -13.7 -3.01422 | opp_overlap 681437 681435 681431 681438, overlap 681435 CATGCTGACAAAGGA TTTGCCGGAAGTGCTTC GCAAAA GAAGTGCTTCCGGCAAA CTATGTTTGTATCCA TERM 973 681438 - 681477 + T 100 -18.1 -2.62495 | opp_overlap 681438 681435, overlap 681437 681435 681431 CATGCTGACAAAGGA TTTGCCGGAAGTGCTTC GCAAAA GAAGTGCTTCCGGCAAA CTATGTTTGTATCCA Dhaf_0620 682403 - 681498 - | transcriptional regulator, LysR family TERM 974 681759 - 681740 - G 71 -6.4 -4.1552 | TATCTGTGGAATAAA TGCCGTCA TTTT TGACGGAA TCCCCTAAAAAGTTA TERM 975 682348 - 682331 - G 70 -2.5 -4.87665 | opp_overlap 682338 GTTCACTTATAAAAA GCCTGGC TGCC GCCTCGC GCATGGTTCCATATT TERM 976 682732 - 682751 + G 89 -3.4 -5.58179 | overlap 682736 TGAAGAATTTGCTGG CAGACCGG ATCG CCGGTGGG TTTTTTCTTGTGATC Dhaf_0621 682716 - 683180 + | putative tricarboxylate transport protein TctB TERM 977 684054 - 684043 - g 80 -3 -5.38047 | overlap 684053 GACTTAGAGAAAAAA TGTT CAAA AACA CCGGAACGGTTCGGC TERM 978 684169 - 684181 + G 85 -10.5 -4.17048 | GGCATTCCAGCCTCC CCGCC CCT GGCGG TTCTTTTGGGGGGAC Dhaf_0622 683194 - 684702 + | protein of unknown function DUF112 transmembrane TERM 979 684759 - 684744 - g 79 -3.3 -5.30199 | AAAAATGAACAAAAA GATGA CTTGGC TCATC GGTATCTTGATTTTG TERM 980 684980 - 684970 - g 77 -8.2 -4.16016 | overlap 684971 TTAGTGGTTAACAAA CCCG GTG CGGG CAACGTTACCGGACT Dhaf_0623 684724 - 685743 + | hypothetical protein TERM 981 685829 - 685869 + F 93 -10 -4.3534 | opp_overlap 685826 685836 685839, overlap 685833 TATAGACTGAAAGTG TTAATGAGAATGGATTTT AGGCA AAAATCCATTCTCATTCC TTTTGATCGTTGCCC TERM 982 685833 - 685865 + F 100 -15.2 -3.73345 | opp_overlap 685826 685836 685839, overlap 685829 GACTGAAAGTGTTAA TGAGAATGGATTTT AGGCA AAAATCCATTCTCA TTCCTTTTGATCGTT TERM 983 685862 - 685836 - f 77 -11.1 -2.74514 | opp_overlap 685833 685829, overlap 685826 685839 TGAAAGTGTTAATGA GAATGGATTTT AGGCA AAAATCCATTC TCATTCCTTTTGATC TERM 984 686961 - 686935 - g 73 -7.2 -4.15044 | CCTCTGCCCAAGAAA TGCTGGCTTCCG GAA CGGAGATCAGCA ACGGGGCCGGCAGGC Dhaf_0624 685971 - 687704 + | methyl-accepting chemotaxis sensory transducer TERM 985 688431 - 688459 + G 71 -8.9 -3.56568 | opp_overlap 688433 688437, overlap 688433 TACTCAGCCCCAGAC CATCAATACAGGC ATT GCCGGTATTGATA TTTCGAAGATAGTTG TERM 986 688433 - 688457 + G 82 -11.5 -3.35775 | opp_overlap 688433 688437, overlap 688431 CTCAGCCCCAGACCA TCAATACAGGC ATT GCCGGTATTGA TATTTCGAAGATAGT TERM 987 688457 - 688433 - g 75 -11.5 -2.62983 | opp_overlap 688431 688433, overlap 688437 CTCAGCCCCAGACCA TCAATACAGGC ATT GCCGGTATTGA TATTTCGAAGATAGT TERM 988 689863 - 689853 - g 77 -8.2 -4.19817 | TTTATCCACCCAAAA CGGC TAT GCCG ACACATCCCTTTCCC Dhaf_0625 687997 - 690042 + | type I phosphodiesterase/nucleotide pyrophosphatase TERM 989 690098 - 690043 - f 100 -18.4 -3.38162 | opp_overlap 690044 690045 690046, overlap 690039 690047 ACGGAAGAAATTTAA CCCATTGCCGGATTCATCTCCCGCTT CGAC AAGCGGGAGGTGAATCCGGCAGCAAT TTTTGGTATCCCAAT TERM 990 690044 - 690097 + F 100 -19.7 -4.8048 | opp_overlap 690039 690043 690047, overlap 690045 690046 CGGAAGAAATTTAAC CCATTGCCGGATTCATCTCCCGCTT CGAC AAGCGGGAGGTGAATCCGGCAGCAA TTTTTGGTATCCCAA TERM 991 690045 - 690096 + F 100 -23.2 -3.47806 | opp_overlap 690039 690043 690047, overlap 690044 690046 GGAAGAAATTTAACC CATTGCCGGATTCATCTCCCGCTT CGAC AAGCGGGAGGTGAATCCGGCAGCA ATTTTTGGTATCCCA TERM 992 690046 - 690095 + F 100 -26.7 -2.68202 | opp_overlap 690039 690043 690047, overlap 690045 690044 GAAGAAATTTAACCC ATTGCCGGATTCATCTCCCGCTT CGAC AAGCGGGAGGTGAATCCGGCAGC AATTTTTGGTATCCC TERM 993 690094 - 690047 - f 100 -25.8 -2.59927 | opp_overlap 690046 690045 690044, overlap 690039 690043 AAGAAATTTAACCCA TTGCCGGATTCATCTCCCGCTT CGAC AAGCGGGAGGTGAATCCGGCAG CAATTTTTGGTATCC Dhaf_0626 690163 - 690492 + | Thioredoxin domain protein TERM 994 690564 - 690606 + F 100 -19.5 -3.17392 | opp_overlap 690564 690567, overlap 690567 CTCATATTAAGCTAA TAAGCCAATCCGATCTC ATTAGCTGA GAGATCGGATTGGCTTA TTGAGTTAAACGCTC TERM 995 690606 - 690564 - f 100 -19.5 -3.22521 | opp_overlap 690564 690567, overlap 690567 CTCATATTAAGCTAA TAAGCCAATCCGATCTC ATTAGCTGA GAGATCGGATTGGCTTA TTGAGTTAAACGCTC TERM 996 690603 - 690567 - f 100 -16.8 -3.74928 | opp_overlap 690567 690564, overlap 690564 ATATTAAGCTAATAA GCCAATCCGATCTC ATTAGCTGA GAGATCGGATTGGC TTATTGAGTTAAACG TERM 997 690567 - 690603 + F 100 -16.8 -3.73068 | opp_overlap 690564 690567, overlap 690564 ATATTAAGCTAATAA GCCAATCCGATCTC ATTAGCTGA GAGATCGGATTGGC TTATTGAGTTAAACG Dhaf_0627 691103 - 691633 + | hypothetical protein TERM 998 693021 - 692993 - g 73 -8.3 -3.81691 | opp_overlap 692990 692999 693001, overlap 692997 692999 AAGATATATCAATAA TAAATGCAGATAC AGC GTATCTGTATTCA ACATTTGAGCTGCAG TERM 999 693017 - 692997 - g 77 -6.9 -4.5032 | opp_overlap 692990 692999 693001, overlap 692993 692999 TATATCAATAATAAA TGCAGATAC AGC GTATCTGTA TTCAACATTTGAGCT TERM 1000 693435 - 693422 - g 73 -5.3 -4.53163 | overlap 693402 TTATACATTATAAAA GAATG GAAA CATTC AACTGGGCCGATTTC Dhaf_0628 692119 - 693558 + | hypothetical protein TERM 1001 694173 - 694153 - g 75 -3.2 -5.04385 | CAGACCTTGAAAAAA GCAAAGGG CTTAT CTCTTCGC ACGAACAAACAATTG Dhaf_0629 693555 - 695141 + | hypothetical protein Dhaf_0630 695138 - 696157 + | hypothetical protein TERM 1002 699385 - 699358 - g 76 -8.4 -4.04174 | gap 1 TTTCACATAAGGAAA TCCGTAGCGACAC ATG GAGCCGC-ACGGA AAAATACGAAATGCG Dhaf_0631 696150 - 701372 + | DEAD/DEAH box helicase domain protein Dhaf_0632 701374 - 702219 + | D12 class N6 adenine-specific DNA methyltransferase TERM 1003 702268 - 702248 - f 73 -8.3 -3.73775 | overlap 702249 TCTAGTGTCATGAAA GTTGCAGCA AAA TGCTGCAAA TATAAAAAGTTCGAA TERM 1004 702267 - 702249 - f 83 -11.8 -2.84051 | overlap 702248 CTAGTGTCATGAAAG TTGCAGCA AAA TGCTGCAA ATATAAAAAGTTCGA TERM 1005 704550 - 704538 - g 73 -4.9 -4.71828 | AGCGGACGAATAAAA TTGAT TAA ATCAA AGCCGATTTTTCTTA TERM 1006 704590 - 704580 - g 73 -4.6 -4.71463 | opp_overlap 704580, overlap 704583 704584 AATCAAAACAATAAA GCAG TGG CCGC CTTTGATTCAAACGG TERM 1007 704613 - 704603 - g 71 -8.2 -3.64703 | opp_overlap 704603 704599, overlap 704584 704583 CGCCTTTGATTCAAA CGGC CAA GCCG TACTGTTTCTGCCAT TERM 1008 705540 - 705504 - g 100 -15.5 -3.80114 | opp_overlap 705495 GACGAAGCCAGGAAA CTTCTTCTTTTTCTTAA TAT TGAAGAAAAAGAAGAAG GTAATGATGGCTTAA TERM 1009 705837 - 705823 - g 71 -7.2 -3.99315 | ACGATAGCGAAAGAA CATCAA CCT TTGATG AAGATGATTATACAA TERM 1010 707030 - 707047 + G 71 -4.9 -4.48987 | gap 1, opp_overlap 707030, overlap 707032 AAGCATTCCTGAAAT TGGC-GAA GTG TTCAGCCA TTTTGCTTATGGGGG TERM 1011 707684 - 707698 + G 72 -5.8 -4.40561 | opp_overlap 707683 707684 TCTTGGCAGTGAAAG TTATCT TGA AGATAA TTCTTTTTCAACAAG Dhaf_0634 703050 - 707804 + | superfamily I DNA/RNA helicase Dhaf_0635 707951 - 708622 + | hypothetical protein Dhaf_0636 708963 - 709190 + | transcriptional regulator, XRE family TERM 1012 710492 - 710459 - g 77 -10.2 -3.55622 | overlap 710438 710437 710460 GCGAACGGCTGGAAA GCCGTCTCGCCGAG GAAAGG CTCGGCAAGCGGGC GTCAGAATACTCCGT TERM 1013 710490 - 710460 - g 72 -11.2 -2.73159 | gap 1, overlap 710438 710437 710459 CGAACGGCTGGAAAG CCGTCTCGCCGAG GAAAGG CTCGGCAAG-CGG GCGTCAGAATACTCC TERM 1014 712097 - 712075 - g 85 -11.3 -3.8679 | GACAAAACAGCGAAA GCGGTCAAG GAACG CCTGACCGC CGAGATTCAATACTG Dhaf_0637 709261 - 712767 + | helicase domain protein TERM 1015 713330 - 713305 - g 76 -9.7 -3.79021 | gap 1 AGATGAAAGATACAA CAGCCTGGCTGG GCA CCAGCG-GGCTG GCCGAAGATGTGCGC TERM 1016 713991 - 714009 + G 72 -6 -4.4784 | opp_overlap 713993, overlap 713993 GGCAGTTCTCAAGAG TACGCAGA AGC TCTGTGTG TTTATTTAGCATTTG Dhaf_0638 712770 - 715490 + | protein of unknown function DUF1156 TERM 1017 716614 - 716604 - g 76 -2.4 -5.27923 | overlap 716605 GAAGCGGACAAAAAA GGCG TTT CCCC CGGTTCGGAAGCGCT TERM 1018 717525 - 717506 - g 76 -8.6 -4.08216 | opp_overlap 717499 TCAGCCCGGCGAAAA CATCGCTG ACTT CAACGATG CACTGAACACACTGA Dhaf_0639 715518 - 718931 + | hypothetical protein TERM 1019 719189 - 719224 + G 76 -9.8 -3.68725 | gap 1, overlap 719188 CTCCAAAACGAGCAG GGC-TTTTTCGGCGATA ACT TTTCGCCGGAAGATGCC TCTTTGTTGAAGATT Dhaf_0640 718958 - 720763 + | ATP-dependent endonuclease of the OLD family-like protein TERM 1020 721023 - 720999 - g 71 -8.5 -3.6715 | opp_overlap 721007 GCACTTAAGGTCAAA CGGGAAGTCGC CGA GAAACTCCCCG CGCTTCTTGGCACAC TERM 1021 721352 - 721362 + G 71 -4 -4.78753 | overlap 721329 GGGGTACATTACCCA TAAC GCG GTTA TTTTATTCGTCTTGG Dhaf_0641 720756 - 722564 + | UvrD/REP helicase TERM 1022 722742 - 722758 + G 76 -2.1 -5.22039 | TTTTCACCATCATTT GTCAGGG ACA CCCTTTC TTTTTTGGATTTAAA Dhaf_0642 722646 - 723953 + | hypothetical protein Dhaf_0643 723953 - 725077 + | protein of unknown function DUF262 Dhaf_0644 725074 - 725760 + | hypothetical protein TERM 1023 726410 - 726399 - g 73 -2.2 -5.02074 | CCAGCGTGGAAAAAA TCGG TGTA CCAA TAGGTCCTGCCATCT Dhaf_0645 725809 - 726873 + | hypothetical protein TERM 1024 727393 - 727372 - g 73 -2.3 -5.1675 | TTATTGATGAAAAAA GGAATGTTC AAGG AAATATTCC AGTCATTCAAACAGA Dhaf_0646 726870 - 729947 + | hypothetical protein TERM 1025 730693 - 730705 + G 73 -3.4 -4.92757 | GGACGTTGCTGTTAG GGAT GTCCA ATCC TTTTGTTCTTACTGA TERM 1026 731425 - 731415 - g 80 -4 -5.30686 | opp_overlap 731420, overlap 731418 731420 AAGAGCTACAAAAAA TTAG ACC CTAA AGCAGCAGTGCGTTC TERM 1027 732497 - 732483 - g 70 -2.1 -4.84262 | overlap 732475 GAAGAAGGAATAAAA TCATC TATTC GACGA AGGTGTGGGCAAATT Dhaf_0647 729966 - 732530 + | hypothetical protein Dhaf_0648 732627 - 733649 + | AAA ATPase TERM 1028 733850 - 733828 - g 73 -3.4 -4.92783 | overlap 733829 733830 AATTGAGTATAAAAA TGCCAGCATT CCT AATGCTGCTA ATCCAGACAGATTTA Dhaf_0649 733649 - 734167 + | hypothetical protein Dhaf_0650 734271 - 734603 + | transcriptional regulator, XRE family Dhaf_0651 734607 - 735254 + | hypothetical protein TERM 1029 735829 - 735843 + G 71 -5 -4.57837 | opp_overlap 735820 735829, overlap 735841 AAATTATCCAAAGAA GAGTTT AAA AAGCTC TTTTTAGAAGGGTAT Dhaf_0652 735316 - 735978 + | hypothetical protein Dhaf_0653 735978 - 736319 + | hypothetical protein Dhaf_0654 736471 - 737097 + | protein of unknown function DUF1130 TERM 1030 737549 - 737583 + F 82 -5.8 -4.99134 | gap 1, opp_overlap 737545 AGATAACGAAGCATG GCACATGTGTAGGGT GAAAAA AACCT-CGCATGTGC TTTTTAATTTCCCCT TERM 1031 737647 - 737605 - f 80 -9.9 -3.72695 | gap 3, opp_overlap 737609 ATTTCCCCTATCAAA GCAGACGGC-GGG-ACCGGG TCAAGG CCCGGAGCCCTGCCG-CTGC TTGAAATAGGGGGTA Dhaf_0655 737672 - 737839 + | hypothetical protein TERM 1032 737928 - 737874 - T 72 -7.9 -3.89368 | gap 1, opp_overlap 737876 737877 737882, overlap 737876 737877 AGAAAAACACGGAAA TAC-GGATTTGTCCCCAAACGCGACA ACGT TGTCGTGTTTGGGGACATGTCATGTT TGAACTGTCTATTGC TERM 1033 737876 - 737926 + T 100 -17.1 -3.66541 | gap 1, opp_overlap 737874 737876 737877, overlap 737877 737882 AAAAACACGGAAATA CG-GATTTGTCCCCAAACGCGACA ACGT TGTCGTGTTTGGGGACATGTCATG TTTGAACTGTCTATT TERM 1034 737925 - 737876 - T 83 -10.7 -3.51168 | opp_overlap 737876 737877 737882, overlap 737874 737877 AAAAACACGGAAATA CGGATTTGTCCCCAAACGCGACA ACGT TGTCGTGTTTGGGGACATGTCAT GTTTGAACTGTCTAT TERM 1035 737877 - 737924 + T 100 -18.6 -3.40558 | opp_overlap 737876 737874 737877, overlap 737876 737882 AAAACACGGAAATAC GGATTTGTCCCCAAACGCGACA ACGT TGTCGTGTTTGGGGACATGTCA TGTTTGAACTGTCTA TERM 1036 737924 - 737877 - T 95 -14.2 -2.69074 | opp_overlap 737877 737876 737882, overlap 737876 737874 AAAACACGGAAATAC GGATTTGTCCCCAAACGCGACA ACGT TGTCGTGTTTGGGGACATGTCA TGTTTGAACTGTCTA TERM 1037 737882 - 737919 + T 100 -23.7 -2.97289 | opp_overlap 737877 737876 737874, overlap 737877 737876 ACGGAAATACGGATT TGTCCCCAAACGCGACA ACGT TGTCGTGTTTGGGGACA TGTCATGTTTGAACT TERM 1038 738027 - 737990 - T 100 -14.3 -4.4891 | opp_overlap 737990 GTCATCAGCATAAAA GAGATAGGCGTCATCCC TTTT AGAACAACGCCTATCTC TTGCCTTTCCGTACC Dhaf_0656 738397 - 738182 - | transcriptional regulator, XRE family Dhaf_0657 738500 - 738706 + | hypothetical protein TERM 1039 738970 - 739011 + F 100 -25.5 -3.87373 | opp_overlap 738982 ACCGCGGAAGCCGGA TTTGTCCCCAAACGCGACA ACGT TGTCGTGTTTGGGGACAAA TTTATGCCGGCTGTA Dhaf_0658 739115 - 739717 + | hypothetical protein TERM 1040 739770 - 739721 - T 86 -11.5 -3.34043 | opp_overlap 739725 739727, overlap 739724 GTGACCATTTGACAA GAGGCTTATCCAGGAATGCGACA ACGT TGTCGCATTCTTGGACATGTTTC GTGCCGGCCGTTACT TERM 1041 739767 - 739724 - T 81 -11.8 -2.54 | opp_overlap 739725 739727, overlap 739721 ACCATTTGACAAGAG GCTTATCCAGGAATGCGACA ACGT TGTCGCATTCTTGGACATGT TTCGTGCCGGCCGTT TERM 1042 739725 - 739766 + T 100 -15.3 -3.72695 | opp_overlap 739724 739721, overlap 739727 CCATTTGACAAGAGG CTTATCCAGGAATGCGACA ACGT TGTCGCATTCTTGGACATG TTTCGTGCCGGCCGT TERM 1043 739727 - 739764 + T 100 -16.5 -3.44848 | opp_overlap 739724 739721, overlap 739725 ATTTGACAAGAGGCT TATCCAGGAATGCGACA ACGT TGTCGCATTCTTGGACA TGTTTCGTGCCGGCC TERM 1044 739776 - 739795 + T 70 -3.5 -4.82901 | GACATGTTTCGTGCC GGCCGTT ACTCTG AGCGGTC TTTTTATGAACAAGG TERM 1045 739885 - 739840 - T 89 -6.7 -5.29445 | opp_overlap 739841 739842, overlap 739813 739842 739845 TCTGAATAAGAAAAA GACAATGGACCGCCGGCCAAG TGAC CTTAGCCGGCAATCCAAGGGA TTTATTTAAGGCTCA TERM 1046 739883 - 739842 - T 100 -13.7 -4.27297 | opp_overlap 739841 739842, overlap 739813 739840 739845 TGAATAAGAAAAAGA CAATGGACCGCCGGCCAAG TGAC CTTAGCCGGCAATCCAAGG GATTTATTTAAGGCT TERM 1047 739880 - 739845 - T 100 -18.4 -4.20092 | opp_overlap 739842 739841, overlap 739813 739842 739840 ATAAGAAAAAGACAA TGGACCGCCGGCCAAG TGAC CTTAGCCGGCAATCCA AGGGATTTATTTAAG Dhaf_0659 740158 - 739919 - | hypothetical protein TERM 1048 740105 - 740136 + g 78 -6 -4.78572 | gap 2 CAGGGTGAATGTCTT TCCTCCGGC--AGT ACTGAA ACTGAGCCGGAGGA TTTTATTCGTTGAAA Dhaf_0660 740419 - 740195 - | protein of unknown function DUF1659 TERM 1049 740447 - 740466 + r 71 -9.2 -3.04983 | opp_overlap 740451, overlap 740449 CTCTTTTTTCATTAT CAGACCGG ATAT CCGGCCTG TCTCTATACTCTATG TERM 1050 740575 - 740532 - R 91 -6.6 -5.54264 | opp_overlap 740535, overlap 740522 740533 740534 AAATATGGAAAAAAA GCTTGTCCAGGACCGCGACA ACGT TGTCGTGTTCCTGGACATTG TTTAGGCGGCGGTCA TERM 1051 740574 - 740533 - R 84 -10.1 -3.90118 | opp_overlap 740535, overlap 740522 740532 740534 AATATGGAAAAAAAG CTTGTCCAGGACCGCGACA ACGT TGTCGTGTTCCTGGACATT GTTTAGGCGGCGGTC TERM 1052 740573 - 740534 - R 100 -13.6 -2.92444 | opp_overlap 740535, overlap 740522 740533 740532 ATATGGAAAAAAAGC TTGTCCAGGACCGCGACA ACGT TGTCGTGTTCCTGGACAT TGTTTAGGCGGCGGT TERM 1053 740535 - 740572 + r 100 -19.3 -3.90744 | opp_overlap 740522 740534 740533 740532 TATGGAAAAAAAGCT TGTCCAGGACCGCGACA ACGT TGTCGTGTTCCTGGACA TTGTTTAGGCGGCGG Dhaf_0661 741776 - 740658 - | FAD dependent dehydrogenase Dhaf_0662 743236 - 741779 - | GerA spore germination protein TERM 1054 743033 - 743043 + g 76 -8.2 -4.07568 | overlap 743017 ATCCCGGAGCTCTTC CGCC GGG GGCG TTTTCCCAGCGGCGG Dhaf_0663 744247 - 743240 - | hypothetical protein TERM 1055 743771 - 743792 + g 81 -5.7 -5.00616 | GTCCACGACGCCCAT GGCGGGGAT CAAA AACCCCACC TTTTTTACCGCCAGC TERM 1056 743852 - 743840 - G 79 -3.3 -5.29782 | opp_overlap 743840 743841, overlap 743841 GATATCCACAAAAAA TGAGG AGC CCTCC TTCATCAGGTTGTCC Dhaf_0664 745462 - 744371 - | spore germination protein TERM 1057 745740 - 745682 - H 100 -18.5 -4.25873 | gap 1, opp_overlap 745690 745703 745736, overlap 745685 745690 CGGTTAGAAAAAATA GAACTAAAGCATGTTCAAGAATGCGACA ACGT TGTCGCATTCTTGGACATGCTTGTGT-C GGCTGTCACTCTTAA TERM 1058 745738 - 745685 - H 100 -21.3 -4.23386 | opp_overlap 745690 745703 745736, overlap 745682 745690 TTAGAAAAAATAGAA CTAAAGCATGTTCAAGAATGCGACA ACGT TGTCGCATTCTTGGACATGCTTGTG TCGGCTGTCACTCTT TERM 1059 745733 - 745690 - H 100 -24.2 -4.15267 | opp_overlap 745690 745703, overlap 745685 745682 AAAAATAGAACTAAA GCATGTTCAAGAATGCGACA ACGT TGTCGCATTCTTGGACATGC TTGTGTCGGCTGTCA TERM 1060 745690 - 745733 + H 100 -26.4 -3.51365 | opp_overlap 745690 745685 745682, overlap 745703 AAAAATAGAACTAAA GCATGTTCAAGAATGCGACA ACGT TGTCGCATTCTTGGACATGC TTGTGTCGGCTGTCA TERM 1061 745703 - 745720 + H 80 -9.9 -3.64259 | opp_overlap 745690 745685 745682, overlap 745690 AAGCATGTTCAAGAA TGCGACA ACGT TGTCGCA TTCTTGGACATGCTT TERM 1062 746499 - 746488 - g 71 -4.4 -4.78764 | TAAAGCTATCAAAAA GATG GAGG CATC CCTGGATGAAGCCTA Dhaf_0665 745823 - 746686 + | hypothetical protein TERM 1063 746708 - 746740 + F 95 -9.2 -4.5123 | gap 1, opp_overlap 746708 CTGCTTATAAGTAAA GGCTTCCCG-GGAGT ATGC ACTCTTCAGGAAGCC TTTCTTTGCTCAGTT TERM 1064 746740 - 746708 - f 83 -9.2 -3.9941 | gap 1, opp_overlap 746708 CTGCTTATAAGTAAA GGCTTCCCG-GGAGT ATGC ACTCTTCAGGAAGCC TTTCTTTGCTCAGTT Dhaf_0666 746934 - 747572 + | hypothetical protein Dhaf_0667 748845 - 747580 - | SEC-C motif domain protein TERM 1065 749132 - 749158 + H 100 -12.4 -3.61328 | opp_overlap 749129 749132 CACAGTGAGATAGCA GGGTGGAGAA CCTTATA TTCTCCACCC TTTGCGCCTCTTGGT TERM 1066 749158 - 749132 - H 91 -13.1 -2.70826 | opp_overlap 749132, overlap 749129 CACAGTGAGATAGCA GGGTGGAGAAC CTTAT ATTCTCCACCC TTTGCGCCTCTTGGT TERM 1067 750324 - 750307 - g 80 -4.8 -5.02476 | ACACCGCGCAAAAAA CGCCTG CCTCAC CAAGCG GAAGATATCGAGGTC Dhaf_0668 749233 - 750675 + | hypothetical protein Dhaf_0669 750656 - 751264 + | hypothetical protein TERM 1068 753597 - 753582 - gf 79 -6.8 -4.58283 | gap 1 GAACTCTGGGAAAAA GCC-GCG GAG CGCTGGC AGGAAGCCCAAAGAC Dhaf_0670 751233 - 754712 + | chromosome segregation ATPase-like protein TERM 1069 755253 - 755230 - g 72 -11 -2.57132 | overlap 755229 755242 GGTCTGGGTGAGAAG CTGGCAAAGG GAGA CCTGTGCCAG GCTGGAGGAAAGAAA TERM 1070 755761 - 755779 + G 100 -11 -4.56597 | GTCCGCCCAAAAGCT GCTGGAGA AGG TCTCCGGC TTTTTAGAGAACCGC Dhaf_0671 754829 - 756082 + | hypothetical protein TERM 1071 757372 - 757388 + G 83 -6.5 -4.98436 | GAGCAGCGACTTTAA GGGGC TTGCTGT GCCCC TTTTTGTGCTGTTGC Dhaf_0672 756122 - 757780 + | hypothetical protein TERM 1072 758001 - 758040 + F 100 -25.2 -3.20633 | opp_overlap 758004 758025, overlap 758004 CAAGATCCTTGCATA GAAGCCGAACCCCGGC CATATAAA GCCGGGGTTCGGCTTC TTCAATATATTCTCA TERM 1073 758004 - 758037 + F 100 -21.1 -3.73302 | opp_overlap 758004 758025, overlap 758001 GATCCTTGCATAGAA GCCGAACCCCGGC CATATAAA GCCGGGGTTCGGC TTCTTCAATATATTC TERM 1074 758037 - 758004 - f 100 -21.8 -3.48593 | opp_overlap 758004 758001, overlap 758025 GATCCTTGCATAGAA GCCGAACCCCGGCC ATATAA AGCCGGGGTTCGGC TTCTTCAATATATTC TERM 1075 759157 - 759167 + G 77 -4.6 -4.91084 | ATGGGCTTCGATAAA CCCG ATC TGGG TTTTGTTATTCACTA TERM 1076 760061 - 760049 - g 75 -3.4 -5.0133 | GACTTGCTGAAAAAA TAGG CTTAC CCTA CATTGATGCAATAAG TERM 1077 760134 - 760148 + G 71 -4.2 -4.8143 | opp_overlap 760126, overlap 760129 CTATCAACAGTGCAG CAATGC CCT GCATGG TTTTTCAGTTATTGA Dhaf_0673 758230 - 760317 + | ATP-dependent DNA helicase, RecQ family Dhaf_0674 760317 - 761558 + | hypothetical protein TERM 1078 761783 - 761751 - T 100 -12.8 -4.06361 | gap 1, opp_overlap 761751 TCATATATAAGGAAA GGCTTCCCG-GGAGT ATGC ACTCTTCGGGAAGCC TTTTTTGCTCAGTTA TERM 1079 761751 - 761783 + T 100 -15 -5.18357 | gap 1, opp_overlap 761751 TCATATATAAGGAAA GGCTTCCCG-GGAGT ATGC ACTCTTCGGGAAGCC TTTTTTGCTCAGTTA Dhaf_0675 762541 - 761792 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1080 762549 - 762561 + H 78 -5.5 -5.04222 | CTGATCATTGTTGGC TCCTC CTC GGGGA TTTTTACTTTCATTC TERM 1081 762653 - 762633 - H 73 -9.7 -2.90763 | GTCACAGTTCATACA TCCCTTGCC GAT GGCAATGGA CTAACGCGTTATTGC Dhaf_0676 762775 - 763392 + | hypothetical protein Dhaf_0677 763441 - 764022 + | hypothetical protein TERM 1082 764020 - 764061 + T 100 -18.2 -2.60723 | opp_overlap 764012 764024, overlap 764024 AAACCAATTGAACTT TAAAGGCTTCCCCAAGAG TTATTT CTCTCGGGGAAGCCTTTG CTTCATTGAAGGTCG TERM 1083 764024 - 764057 + T 100 -16.8 -4.00348 | opp_overlap 764012 764024, overlap 764020 CAATTGAACTTTAAA GGCTTCCCCAAGAG TTATTT CTCTCGGGGAAGCC TTTGCTTCATTGAAG TERM 1084 764057 - 764024 - T 100 -19 -3.67864 | opp_overlap 764024 764020, overlap 764012 CAATTGAACTTTAAA GGCTTCCCCAAGAG TTATTT CTCTCGGGGAAGCC TTTGCTTCATTGAAG Dhaf_0678 764445 - 764101 - | DNA polymerase beta domain protein region Dhaf_0680 765543 - 765824 + | hypothetical protein TERM 1085 765893 - 765880 - T 82 -5.9 -4.99043 | opp_overlap 765880 765884 TGCCTATAAAGAAAA CCCGG TTCG CCGAG CTTTACATTTTACGC TERM 1086 765911 - 765955 + T 74 -9.5 -3.25449 | gap 1, opp_overlap 765917 765918, overlap 765918 TTACATTTTACGCAT CACAAAGGCTTCCC-AGGAG GTTGCA CTCTTAGGGAAGCTTTTTTG TGTTCAATTCTTTTT TERM 1087 765918 - 765948 + T 100 -8.4 -5.48063 | gap 1, opp_overlap 765917 765918, overlap 765911 TTACGCATCACAAAG GCTTCCC-AGGAG GTTGCA CTCTTAGGGAAGC TTTTTTGTGTTCAAT Dhaf_0681 766872 - 765997 - | transcriptional regulator, LysR family TERM 1088 766577 - 766550 - G 75 -5.4 -4.76123 | AAATCAGGAAGAAAA TGGGCAGGCAGC ATCT GCAGCATTCCCA TAAAAAAGCCGATTT TERM 1089 767068 - 767079 + G 80 -7.2 -4.57569 | GGCGCTGTGGGGGTT GCCG CTGC CGGC TTTTTGGGAGGCTGC Dhaf_0682 766999 - 768921 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 1090 768974 - 768933 - f 100 -20.4 -3.93117 | opp_overlap 768938, overlap 768938 GTAAGCATAGAACAA CAAAAGCTTCCCGGAGAG CGATGC CTCTCCGGGAAGCTTTTT CCTCTGCTCATGCCT TERM 1091 768938 - 768969 + F 100 -20.3 -4.82667 | opp_overlap 768933 768938 CATAGAACAACAAAA GCTTCCCGGAGAG CGATGC CTCTCCGGGAAGC TTTTTCCTCTGCTCA TERM 1092 768969 - 768938 - f 100 -20.3 -4.97957 | opp_overlap 768938, overlap 768933 CATAGAACAACAAAA GCTTCCCGGAGAG CGATGC CTCTCCGGGAAGC TTTTTCCTCTGCTCA TERM 1093 769521 - 769501 - g 75 -5.3 -4.71426 | opp_overlap 769504, overlap 769502 769504 GGCTGATGAATAAAA TTATCCGGG ACC CCCGGATGC CGGATTCCCTGCGGA TERM 1094 769518 - 769504 - g 82 -11.4 -3.27725 | opp_overlap 769504, overlap 769502 769501 TGATGAATAAAATTA TCCGGG ACC CCCGGA TGCCGGATTCCCTGC TERM 1095 769964 - 769951 - g 82 -5.2 -5.03314 | CCGAGGCGGAAAAAA CCGG GGTCAG CCGG ATGATCTTCCAGCCG Dhaf_0683 769134 - 769991 + | hypothetical protein TERM 1096 770260 - 770248 - g 73 -4.8 -4.74103 | opp_overlap 770248 TGCCCAAGGGAAAAA GGTC TACCT GACC TTGAATCAACCGGGC TERM 1097 770279 - 770307 + G 74 -6.8 -4.37092 | gap 1, opp_overlap 770270, overlap 770281 770282 AATCAACCGGGCTAT GCTCAGGATCTCT ATGG GGAGATTCTG-GC TTTTGTCAGAGAGGT TERM 1098 770667 - 770687 + G 73 -9.7 -3.29511 | opp_overlap 770662 770663 GGCGGTATAAGCTGA TCCCGCC GGAAGAG GGCGGGA TTCTGGAGACCTGGA Dhaf_0684 770024 - 771055 + | peptidase U32 TERM 1099 771066 - 771104 + T 100 -23.4 -3.67517 | opp_overlap 771069, overlap 771069 GCTGACTGCGGACCA CAAGACCCCGGAGAGA TGTTTGC TCTCTCCGGGGTCTTG TTTGCGGTCTTGCTG TERM 1100 771069 - 771101 + T 100 -19.3 -3.96449 | opp_overlap 771069, overlap 771066 GACTGCGGACCACAA GACCCCGGAGAGA TGTTTGC TCTCTCCGGGGTC TTGTTTGCGGTCTTG TERM 1101 771101 - 771069 - T 100 -19.3 -3.4072 | opp_overlap 771069 771066 GACTGCGGACCACAA GACCCCGGAGAGA TGTTTGC TCTCTCCGGGGTC TTGTTTGCGGTCTTG Dhaf_0685 772438 - 771125 - | Ig domain protein group 2 domain protein TERM 1102 771167 - 771191 + g 73 -3.4 -4.90136 | CGATGTTTTTTCAAT CGTTGGCGAG TAAAT CCCGGCAGCG TTTTTGATATTGATT TERM 1103 772855 - 772869 + G 73 -7 -4.24342 | TGTGCTCAACATCGC CCTGCC CCT GGCCGG TTTGTTGCTGGGAGG Dhaf_0686 772703 - 773980 + | methyl-accepting chemotaxis sensory transducer TERM 1104 774403 - 774413 + G 77 -6.8 -4.61873 | opp_overlap 774380 AAAAATTTGTCTATT CTGC CGG GCAG TTTTGCTTTATGGAC TERM 1105 774734 - 774722 - g 80 -4.9 -5.14163 | opp_overlap 774725 ACTGACCAATAAAAA GATTT CGG AAATC ACCGGACTTCATTAT Dhaf_0687 774189 - 774875 + | transcriptional regulator, Crp/Fnr family TERM 1106 774890 - 774918 + F 100 -5.9 -5.80364 | opp_overlap 774890 ACTGACTGATAGGAA CTGCTTTCTCAGC GCA GCGTTGAAAGCAG TTTTTTTGTTGAGAT Dhaf_0688 775021 - 775332 + | hypothetical protein TERM 1107 775380 - 775367 - g 74 -3.1 -5.02074 | CGATTCTTCAAAAAA CCAAA ATAC TTCGG AACAAAAACTTCAGT TERM 1108 775997 - 775973 - g 71 -9.3 -3.54424 | opp_overlap 775964 GGGTATGGTGCCAAA GGGGACACCTT TCG AAGATGTACCC TATGAGGAGAAATTG TERM 1109 776495 - 776478 - g 85 -5.5 -5.31877 | AGTGATTATAAAAAA TGCGCTG AATT CAGAGCA GGCAACGATGAAGGA Dhaf_0689 775329 - 776720 + | reductive dehalogenase TERM 1110 776783 - 776757 - f 100 -15.2 -4.12532 | opp_overlap 776757 TTTCCTATATAGAAA TCATGCGGCGTA TAA TCCGCCGCATGA TTTATTAACAAACCA TERM 1111 776757 - 776783 + F 100 -15.2 -4.15044 | opp_overlap 776757 TTTCCTATATAGAAA TCATGCGGCGTA TAA TCCGCCGCATGA TTTATTAACAAACCA Dhaf_0690 777026 - 777343 + | hypothetical protein Dhaf_0691 777345 - 777776 + | hypothetical protein TERM 1112 779042 - 779056 + G 75 -5.7 -4.5032 | TTGAAAACAGCACTA CGTCA GTTAA TGACG TTTGTTCTTAATCTA Dhaf_0692 777830 - 779182 + | transposase IS4 family protein Dhaf_0693 779207 - 780265 + | reductive dehalogenase TERM 1113 780311 - 780279 - f 100 -15 -4.06562 | opp_overlap 780274, overlap 780281 AAGCGGAACGACAAA GA-CTGCCGGCTCTCC AAC GG-GAGCCGGCAGCTC ACGATATGGTTTTGC TERM 1114 780308 - 780281 - f 100 -17.8 -3.6217 | gap 1, opp_overlap 780274, overlap 780279 GCGGAACGACAAAGA CTGCCGGCTCTCC AAC GG-GAGCCGGCAG CTCACGATATGGTTT Dhaf_0694 780363 - 781538 + | FMN-binding domain protein Dhaf_0695 781574 - 781768 + | hypothetical protein TERM 1115 782612 - 782590 - g 73 -2.5 -5.03314 | overlap 782591 CGGATTGTGAAAAAA GCCGCCCGC TTTTT GGGAGCGGA TATGGCCGGCATTGC TERM 1116 782917 - 782939 + G 74 -2.6 -5.00884 | overlap 782920 TACTCGAACATGGGA GAAGTGGCCT ATA AGGTTGCCTC TTTTTTGAGAGAGAT Dhaf_0696 781894 - 783546 + | reductive dehalogenase Dhaf_0697 783562 - 783867 + | hypothetical protein TERM 1117 784169 - 784153 - f 78 -4.3 -5.09895 | CAGCCATTGAAAAAA CCATAGG AAC CCAACGG GCTTACAAAGTCGAG TERM 1118 785125 - 785135 + G 93 -8.2 -5.10208 | ACTGTCAATTCTTCT GCCC CGT GGGC TTTTTGTTAACCTTG Dhaf_0698 784155 - 785237 + | FMN-binding domain protein Dhaf_0699 785391 - 786344 + | trigger factor domain protein Dhaf_0700 786367 - 787080 + | cyclic nucleotide-binding protein TERM 1119 787543 - 787555 + G 77 -4.8 -4.85782 | CGTAACCCGTCTTAA GGGA GGGGA TCCC TTTGTTTTTGGACGG TERM 1120 787865 - 787853 - g 71 -10.5 -2.79289 | overlap 787852 CAGCATGGGAAGAAT CCGGC GAC GCCGG TGGGGATCATCCAAT Dhaf_0701 787280 - 788794 + | uroporphyrin-III C-methyltransferase Dhaf_0702 789505 - 788804 - | cyclic nucleotide-binding protein TERM 1121 789377 - 789391 + g 89 -5.7 -5.28176 | TGACTGTCCCTCCCG CAGGA TAACC TCCTG TTTTTTATAGCTGAC TERM 1122 789638 - 789626 - R 80 -4.8 -5.16206 | opp_overlap 789635, overlap 789635 AAACGAATAGAAAAA GGTG AAAAA CACC TGCCGCAAAAGAATG TERM 1123 789635 - 789661 + r 71 -8.8 -3.28416 | gap 1, opp_overlap 789626 789635 GAAAAAGGTGAAAAA CACCTGCCGCA AAAGAA TG-GGCAGGTG TTGGTGTGCATGATA TERM 1124 789661 - 789635 - R 100 -8.8 -4.7657 | gap 1, opp_overlap 789635, overlap 789626 GAAAAAGGTGAAAAA CACCTGCCGCA AAAGAA TG-GGCAGGTG TTGGTGTGCATGATA Dhaf_0703 790020 - 789757 - | hypothetical protein TERM 1125 790121 - 790100 - H 77 -3.7 -5.22289 | overlap 790101 790102 TATCAAAGACAAAAA CGCTGTTGT ATTT ACAACAGTA ACAAAAGATTTACAG Dhaf_0704 790514 - 791698 + | major facilitator superfamily MFS_1 Dhaf_0705 792411 - 791728 - | cyclic nucleotide-binding protein TERM 1126 792685 - 792654 - H 79 -8.2 -4.15006 | gap 1, opp_overlap 792654 792684 ATAGTTATCGTAAAA GGACATAACAATTGA TTT TCT-TTGTTATGTCC TTAATATGAAGGGTT Dhaf_0706 792760 - 794004 + | protein of unknown function DUF224 cysteine-rich region domain protein TERM 1127 794666 - 794654 - g 71 -4.8 -4.56597 | TCCTCTGGCGAAAAA GGCA GTTAT TGCC CGCTTTGCTTCAATT Dhaf_0707 794022 - 795323 + | FAD linked oxidase domain protein Dhaf_0708 795347 - 796729 + | FAD linked oxidase domain protein TERM 1128 796771 - 796811 + F 100 -14.2 -3.44586 | opp_overlap 796778, overlap 796772 796774 796778 GAATACGAACAGTGC AGATAAAGTGCGTTTCCA GGCCA TGGAACCGCACTTTATCA TTCTCATACCTTGGT TERM 1129 796772 - 796810 + F 100 -17.7 -2.6627 | opp_overlap 796778, overlap 796771 796774 796778 AATACGAACAGTGCA GATAAAGTGCGTTTCCA GGCCA TGGAACCGCACTTTATC ATTCTCATACCTTGG TERM 1130 796774 - 796808 + F 100 -14.5 -2.87014 | opp_overlap 796778, overlap 796772 796771 796778 TACGAACAGTGCAGA TAAAGTGCGTTTCCA GGCCA TGGAACCGCACTTTA TCATTCTCATACCTT TERM 1131 796778 - 796804 + F 93 -10.9 -4.11281 | opp_overlap 796778, overlap 796774 796772 796771 AACAGTGCAGATAAA GTGCGTTTCCA GGCCA TGGAACCGCAC TTTATCATTCTCATA TERM 1132 796804 - 796778 - f 90 -10.9 -4.06148 | opp_overlap 796778 796774 796772 796771 AACAGTGCAGATAAA GTGCGTTTCCA GGCCA TGGAACCGCAC TTTATCATTCTCATA Dhaf_0709 796923 - 797618 + | transcriptional regulator, Crp/Fnr family TERM 1133 797647 - 797628 - f 77 -6.3 -4.67038 | opp_overlap 797624 797628 TTCTGAAAACCAAAA GGGTGGC GGTTAA GCCGCCC TTAAATTTTTTAAAA TERM 1134 797628 - 797647 + F 71 -8.5 -3.52177 | opp_overlap 797628, overlap 797624 TTCTGAAAACCAAAA GGGTGGC GGTTAA GCCGCCC TTAAATTTTTTAAAA Dhaf_0710 797763 - 798077 + | hypothetical protein TERM 1135 798209 - 798183 - g 80 -12.2 -2.89447 | opp_overlap 798190, overlap 798180 CTCCAAGGATAACCA TGCCCGTGGTCC GGC GGCCCACCGGCA GCCCAGGATCAGCCG Dhaf_0711 798112 - 799578 + | reductive dehalogenase TERM 1136 799601 - 799635 + F 100 -17.4 -3.54424 | opp_overlap 799607 799608, overlap 799607 799608 GATAAAGAATTGGAT GGAAAATCATGAGCAG ATC CTGCTCATGGTTTTTC TTTAACAAAATGGCC TERM 1137 799607 - 799629 + F 100 -12.8 -5.27335 | opp_overlap 799607 799608, overlap 799601 799608 GAATTGGATGGAAAA TCATGAGCAG ATC CTGCTCATGG TTTTTCTTTAACAAA TERM 1138 799629 - 799607 - f 91 -10.6 -4.19704 | opp_overlap 799607 799601 799608, overlap 799608 GAATTGGATGGAAAA TCATGAGCAG ATC CTGCTCATGG TTTTTCTTTAACAAA TERM 1139 799628 - 799608 - f 100 -14.1 -3.11341 | opp_overlap 799607 799601 799608, overlap 799607 AATTGGATGGAAAAT CATGAGCAG ATC CTGCTCATG GTTTTTCTTTAACAA TERM 1140 799608 - 799628 + F 100 -14.1 -3.75678 | opp_overlap 799608 799607, overlap 799607 799601 AATTGGATGGAAAAT CATGAGCAG ATC CTGCTCATG GTTTTTCTTTAACAA Dhaf_0712 799797 - 800102 + | hypothetical protein Dhaf_0713 800116 - 801492 + | reductive dehalogenase TERM 1141 801557 - 801528 - f 100 -16.7 -4.82901 | opp_overlap 801531 GCGGGTTTATAAAAA TAAGCGGTAAGAA ATGA TTCTTACCGCTTA TCGGGCTTACCTGAA TERM 1142 801531 - 801554 + F 100 -14 -3.3344 | opp_overlap 801528 GGTTTATAAAAATAA GCGGTAAGAA ATGA TTCTTACCGC TTATCGGGCTTACCT TERM 1143 802379 - 802364 - g 73 -4.6 -4.81359 | overlap 802365 AAGGCAAAGATAAAA TGGTCG TCTA CGACCT GGAAAGGCTGAAAAG Dhaf_0714 801724 - 802422 + | transcriptional regulator, Crp/Fnr family TERM 1144 802472 - 802499 + F 100 -15.6 -5.49809 | TCTCAATCAGCTTGG GCCGCCGACAAA GTGA TTTGCCGGCGGC TTTTTTTACACTTTC TERM 1145 802598 - 802612 + F 86 -7 -4.99043 | opp_overlap 802597 802600, overlap 802600 TGCGTGATTAAAAGG CACGGC GAA GCCGGG TTTTCTTTATCCGGG Dhaf_0715 802728 - 803138 + | hypothetical protein Dhaf_0716 803135 - 804760 + | chaperonin Cpn60/TCP-1 TERM 1146 805188 - 805177 - g 100 -5.8 -5.65513 | opp_overlap 805186 TATGAAGGAAAAAAA GGCA ATGA TGCC CTGACAGGGGGCTAT Dhaf_0717 804814 - 805995 + | FMN-binding domain protein Dhaf_0718 805985 - 806089 + | hypothetical protein TERM 1147 807605 - 807622 + G 74 -9.1 -3.75629 | TCCAGGTGACCTGTG CCGCGCT GAGA AGTGCGG TTTCCATTGCCACTC Dhaf_0719 806107 - 807678 + | chaperonin Cpn60/TCP-1 TERM 1148 807718 - 807733 + F 84 -6.1 -5.04733 | opp_overlap 807718, overlap 807713 TTTCTGTTTTTAAAA CCAGG CTTGGA CCTGG TTTTCTTTATAGTTC Dhaf_0720 807871 - 808506 + | cobalamin B12-binding domain protein Dhaf_0721 808511 - 809686 + | hypothetical protein Dhaf_0722 809702 - 810511 + | dihydropteroate synthase DHPS TERM 1149 810561 - 810550 - g 71 -4.4 -4.66163 | opp_overlap 810550 ATGGGCATGGAAAAA CAAC AATT GTTG ATTCCTTGGAGTGAG Dhaf_0723 810541 - 810687 + | hypothetical protein TERM 1150 810811 - 810765 - T 100 -15.5 -4.11371 | gap 1, opp_overlap 810765, overlap 810755 GAAGACTCGCCAAAA GCAAGATGATCACGCTGCGTAT CAGG ATATA-AGCGTGATCATCTTGC TTTTGGCATATCGGG TERM 1151 810765 - 810811 + T 100 -15.5 -4.16943 | gap 1, opp_overlap 810755 810765 GAAGACTCGCCAAAA GCAAGATGATCACGCTGCGTAT CAGG ATATA-AGCGTGATCATCTTGC TTTTGGCATATCGGG Dhaf_0724 811817 - 810858 - | trigger factor domain protein TERM 1152 811035 - 811045 + g 77 -4 -5.08824 | CCGGAATTCACTGGG TTCA ACC TGAA TTTTTTCGATCCGGG Dhaf_0725 812035 - 812205 + | hypothetical protein Dhaf_0726 812395 - 812826 + | ribosomal protein L13 Dhaf_0727 812848 - 813243 + | ribosomal protein S9 TERM 1153 813248 - 813296 + F 100 -14.1 -3.59979 | opp_overlap 813260, overlap 813260 CCAAGCGTTAATCGC GAAGTACAAAAATCCTCAAACCA GTG TGGTTTGGGGATTTTTTTTCTGC TTTACAATGGCAGGA TERM 1154 813260 - 813284 + F 100 -13.7 -6.04378 | opp_overlap 813260, overlap 813248 CGCGAAGTACAAAAA TCCTCAAACCA GTG TGGTTTGGGGA TTTTTTTTCTGCTTT TERM 1155 813284 - 813260 - f 100 -11.5 -4.98255 | opp_overlap 813248 813260 CGCGAAGTACAAAAA TCCTCAAACCA GTG TGGTTTGGGGA TTTTTTTTCTGCTTT TERM 1156 813398 - 813413 + G 74 -2.6 -5.01845 | AGTGAAAGAGGATGA TATAGG CCTA CTTATA TTTTTGATTCTTATG Dhaf_0728 813384 - 814001 + | hypothetical protein Dhaf_0729 814947 - 814060 - | protein of unknown function DUF6 transmembrane TERM 1157 814628 - 814614 - G 71 -5 -4.56597 | CTTTTTCTTTAAAAA TCATGG TGG CCATAA GCACAACCATTAATG TERM 1158 815128 - 815114 - H 73 -8.6 -3.63515 | opp_overlap 815120 CTGTACTTTGAAGAA TGGTTG CCT CAACCA AGCATGGTTGGGGTT TERM 1159 815120 - 815141 + H 100 -10.9 -5.56263 | opp_overlap 815114 TTTGAAGAATGGTTG CCTCAACCA AGCA TGGTTGGGG TTTTTGTTTTATGAT TERM 1160 815611 - 815587 - g 90 -10.1 -4.43877 | opp_overlap 815594, overlap 815591 TAAGCGCCAAAGAAA TTAATGAGCTG CAG CAGCTCATTGA CCAGCATAAGGAGGA TERM 1161 815607 - 815591 - g 81 -10.9 -3.75884 | opp_overlap 815594, overlap 815587 CGCCAAAGAAATTAA TGAGCTG CAG CAGCTCA TTGACCAGCATAAGG Dhaf_0730 815268 - 815630 + | transcriptional repressor, CopY family TERM 1162 816012 - 816023 + G 73 -2.2 -5.1101 | GTATTGCCGTTCTTT TGCT CTAC AGCG TTTTTTCACTGCTGA TERM 1163 816064 - 816048 - g 71 -5 -4.62069 | overlap 816050 TGCTGAGTTTAAAAA GGCGGC TGAAG GACGCC GTCCATGATAAGGAG Dhaf_0731 815633 - 817792 + | peptidase M56 BlaR1 Dhaf_0732 818828 - 817893 - | trigger factor domain protein TERM 1164 819110 - 819093 - g 74 -4.1 -4.96848 | TTCCCCATAGAAAAA CTGCGCA ATTA TACACAG ATGGGGCTGATCAGG TERM 1165 819151 - 819180 + G 93 -6.6 -5.52384 | gap 1, overlap 819157 AAGGCAGTGCCGTCA TCATGCCTGGTGA AGAAA TCACCAG-TATGA TTTTTTTGGTGGAAG Dhaf_0733 819021 - 819719 + | cyclic nucleotide-binding protein Dhaf_0734 819830 - 820243 + | hypothetical protein Dhaf_0735 820240 - 821787 + | chaperonin Cpn60/TCP-1 TERM 1166 822072 - 822093 + G 81 -8.1 -4.61231 | CGGCCATGTTAAGGC CACAAGTAC CGCC GTATTTGTG TTTTTAGGGATATCC Dhaf_0736 821881 - 822192 + | hypothetical protein Dhaf_0737 822205 - 823542 + | reductive dehalogenase TERM 1167 824327 - 824353 + G 76 -7.2 -4.4767 | GTGCCTTGTTTTTGG GGTATTTTCCGG TAC CCGGCGAAAACC TTTTGTGGTACATCG Dhaf_0738 823636 - 824814 + | FMN-binding domain protein Dhaf_0739 824804 - 824938 + | hypothetical protein TERM 1168 825215 - 825200 - g 73 -2.5 -5.00884 | overlap 825204 825211 AGGTGTCGGAAAAAA CCAAC GACAGA GTCGG GGATGGAACCACGAC TERM 1169 826258 - 826246 - g 81 -6.2 -4.94058 | CTAATCCAAATAAAA CCGG AGGAG CCGG AGGAAGAAGCCGGTC Dhaf_0740 824962 - 826533 + | chaperonin GroEL TERM 1170 826703 - 826720 + F 100 -9.1 -4.92757 | opp_overlap 826703 826701 GAGGACAATAAAGGA CCGAGGC TGTA GCCTTGG TTTTCTTATTAATCA Dhaf_0741 827047 - 827478 + | flavodoxin TERM 1171 827514 - 827536 + F 80 -9.8 -3.65046 | opp_overlap 827514 CAGATATTAACGAAA GTCCCTGGTT ATA GGCCGGGGAC TTCTTGCAATAAAGA Dhaf_0742 827623 - 828171 + | hypothetical protein TERM 1172 828212 - 828235 + F 100 -9.6 -5.24129 | TGATGGCGGCTCTGG GCCCAAGG GATGCAAA CCTTGGGC TTTTTTCTGGAAAAG TERM 1173 829082 - 829098 + G 87 -5.1 -5.39721 | GCAAAGCGCGGTTGC TAATCCC TGG GGGCTTA TTTTTTATGTGATCG Dhaf_0743 828657 - 829280 + | succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family TERM 1174 829515 - 829499 - g 80 -6.6 -4.66537 | GCGGTCAACACAAAA GGTGAA GGGGA TTCACC TTGGGAGCATTTCGA TERM 1175 830758 - 830741 - g 73 -7.7 -4.1021 | gap 1 CGCTATAATGACAAA CTGG-CCG GAA CGGACCAG AAGATCCAGGAGCTT Dhaf_0744 829337 - 831073 + | succinate dehydrogenase or fumarate reductase, flavoprotein subunit Dhaf_0745 831085 - 831837 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 1176 832140 - 832155 + F 100 -10.4 -5.01546 | GCGCTGCTTCTTCTT GGGCCT GTTC AGGCCC TTTTTCTATGCCTTT Dhaf_0746 832208 - 833095 + | ectoine/hydroxyectoine ABC transporter solute-binding protein TERM 1177 833237 - 833261 + G 78 -9.2 -4.03413 | gap 1, opp_overlap 833237 833236 833234 CGCTTGTCCAAATAT CCGCCGCTCCG CTTT CTG-GCGGCGG TTTATGTCGAAGCCT Dhaf_0747 833108 - 833752 + | ectoine/hydroxyectoine ABC transporter, permease protein EhuC Dhaf_0748 833754 - 834410 + | ectoine/hydroxyectoine ABC transporter, permease protein EhuD TERM 1178 834546 - 834528 - g 89 -6 -5.1861 | TGCACTACGAAAAAA TCTCCAAA GCG TATGGAGA CTTGCAGGTCTTAAA Dhaf_0749 834422 - 835270 + | ectoine/hydroxyectoine ABC transporter, ATP-binding protein TERM 1179 835294 - 835332 + T 78 -6 -4.81357 | opp_overlap 835298 835305, overlap 835305 GGGAAGTAAATCGAT GAATCAAAAAACCAGGCC TCA GGCCTGGTTTTTGCATAG TTTCTTTTATACTAT TERM 1180 835327 - 835298 - T 100 -14.5 -2.54999 | gap 1, opp_overlap 835294 835305, overlap 835305 AGTAAATCGATGAAT CAAAAAACCAGGCC TCA GGCCTGGTTTTT-G CATAGTTTCTTTTAT TERM 1181 835305 - 835321 + T 100 -13.7 -4.72386 | opp_overlap 835298 835305, overlap 835294 CGATGAATCAAAAAA CCAGGCC TCA GGCCTGG TTTTTGCATAGTTTC TERM 1182 835321 - 835305 - T 100 -13.7 -5.30155 | opp_overlap 835305 835294, overlap 835298 CGATGAATCAAAAAA CCAGGCC TCA GGCCTGG TTTTTGCATAGTTTC TERM 1183 835358 - 835372 + T 70 -2.8 -5.03715 | overlap 835349 ACTATCTTGCGCCGG TAATCG CCG CGATGA TTTTTTCCGGATCAT Dhaf_0750 835883 - 835344 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1184 835730 - 835743 + g 76 -9.5 -3.65201 | opp_overlap 835730 835729, overlap 835739 TAGCTTTTTGAGAAC GGCCC TGCA GGGCC TTGTTAAGCCTCTTC TERM 1185 835907 - 835925 + H 76 -10.3 -2.98381 | overlap 835903 835920 CCCTCCATTCTTGTA CTCTGCG CCGCC CGCAGAG TCGTTTGCTACGTTG TERM 1186 836223 - 836205 - H 73 -8.8 -3.56099 | overlap 836218 CATAAGTTTTTTAAA GGGCGGAT AAC ATCCGGCC CAAGGCATGGGAAGG Dhaf_0751 836249 - 837010 + | cell wall hydrolase/autolysin TERM 1187 837057 - 837083 + T 100 -21 -4.48333 | opp_overlap 837057 ATAGTTCCAAACAAA TAGTCCTCGGGG CCA CCCCGAGGACTA TTTTAATTAGTGTAT TERM 1188 837083 - 837057 - T 100 -21 -4.43208 | opp_overlap 837057 ATAGTTCCAAACAAA TAGTCCTCGGGG CCA CCCCGAGGACTA TTTTAATTAGTGTAT Dhaf_0752 838907 - 837105 - | hypothetical protein TERM 1189 837386 - 837402 + g 73 -3.7 -4.90455 | opp_overlap 837389, overlap 837387 CGATGAATAAGTTTA AGATGTT TTT AACATCA TTTTTATAAATCTCT Dhaf_0753 839110 - 839724 + | hypothetical protein Dhaf_0754 839721 - 840200 + | hypothetical protein TERM 1190 840227 - 840249 + F 95 -11.4 -3.85909 | opp_overlap 840227 840226 840224 840229 CATTTTAGAAAATAG CAGCAGATTT TTA AAGTCTGCTG TTTCCATTTGCCTAC TERM 1191 840249 - 840227 - f 70 -9.2 -2.88044 | opp_overlap 840227, overlap 840226 840224 840229 CATTTTAGAAAATAG CAGCAGATTT TTA AAGTCTGCTG TTTCCATTTGCCTAC Dhaf_0755 840479 - 841384 + | arginase TERM 1192 841388 - 841374 - f 77 -3.6 -5.24129 | CTTTTGGACAAAAAA TTTATC CGT GACAAA AAGTTTAAATATAAT Dhaf_0756 841537 - 842085 + | RNA polymerase, sigma-24 subunit, ECF subfamily Dhaf_0757 842069 - 842542 + | hypothetical protein TERM 1193 842729 - 842739 + G 71 -8.2 -3.65199 | opp_overlap 842710 842726 842728 842729, overlap 842735 TTTGAAATTCAACAG CCGG CCG CCGG TTTGGATACGGCATT Dhaf_0758 842561 - 843742 + | amidohydrolase TERM 1194 843760 - 843787 + F 91 -7 -5.46706 | CTCCGCGCCATAGGA GTCGTTGCTTTG GGAT TGAAGCAGCGGC TTTTTCTTTTACACT TERM 1195 843895 - 843864 - f 71 -6.6 -4.08706 | gap 1, overlap 843865 GGTTTAGCACATAAA GTTGAGGCAGCCGGA TTG TGCGGCT-CCTCAAA AAGATATTTACCGGC TERM 1196 843894 - 843865 - f 73 -10.1 -3.04902 | gap 1, overlap 843864 GTTTAGCACATAAAG TTGAGGCAGCCGGA TTG TGCGGCT-CCTCAA AAAGATATTTACCGG TERM 1197 844403 - 844390 - g 74 -3.1 -5.09225 | opp_overlap 844390 ACCCCAGTGAAAAAA GACTC AACG AAGTC TTATATGATGCCATG TERM 1198 844699 - 844681 - g 74 -6.6 -4.42386 | CGGGTACGGACAAAA GAGCACGC TAT GCAGGCTC CCCCATTCATTACAG Dhaf_0759 843936 - 845165 + | nuclease SbcCD, D subunit TERM 1199 846243 - 846228 - g 78 -5.4 -4.83615 | overlap 846232 TATCCTGGAGAAAAA GAAGCT GGAG AGCCTC ATCCAGGAAAAAAAG TERM 1200 846272 - 846258 - g 85 -2.8 -5.53991 | overlap 846259 CATCCAGGAAAAAAA GTCTCT TCA AGAGAA CATTGGCCGGCTGGA TERM 1201 846962 - 846945 - g 71 -6.3 -4.18018 | opp_overlap 846945 TGTTGGTACTGAAAA GCTTGAA GAGA TCCAAGC TGCTTTAAGGGAAAA Dhaf_0760 845152 - 848649 + | SMC domain protein TERM 1202 848719 - 848758 + T 100 -14.4 -3.02461 | opp_overlap 848720 848724, overlap 848724 GCTATATCTCGATAA ACAAAGAGGCCGATTTGT GTAA ACAAGCCGGCCTCTTTGC TATTCGGGGCCATTG TERM 1203 848757 - 848720 - T 100 -17.9 -3.88787 | opp_overlap 848719 848724, overlap 848724 CTATATCTCGATAAA CAAAGAGGCCGATTTGT GTAA ACAAGCCGGCCTCTTTG CTATTCGGGGCCATT TERM 1204 848753 - 848724 - T 100 -12.9 -4.55697 | opp_overlap 848724 848719, overlap 848720 ATCTCGATAAACAAA GAGGCCGATTTGT GTAA ACAAGCCGGCCTC TTTGCTATTCGGGGC TERM 1205 848724 - 848753 + T 100 -12.9 -3.92324 | opp_overlap 848720 848724, overlap 848719 ATCTCGATAAACAAA GAGGCCGATTTGT GTAA ACAAGCCGGCCTC TTTGCTATTCGGGGC TERM 1206 848763 - 848797 + T 100 -13.6 -4.1822 | GGCCTCTTTGCTATT CGGGGCCATTGCAAAA TAG TTTTGCGACGCCCCCG TTTCTTGGGGTGAAA TERM 1207 848838 - 848817 - T 80 -10.3 -3.51232 | overlap 848813 TTGGGGTGAAACTAA GATTCGAAT CCGG ATTCGAATC TGACGAGCCCTCTTG Dhaf_0761 849749 - 848904 - | formamidopyrimidine-DNA glycosylase Dhaf_0762 850476 - 849754 - | hypothetical protein TERM 1208 850006 - 850036 + g 73 -3.3 -4.99861 | gap 1 ATACTTTTCAATATC TATCGC-CTCAAGC ATGG GCTGAAGGGCGATA TTTTTGTGCTTAATG Dhaf_0763 850969 - 850529 - | transcription activator effector binding Dhaf_0764 851941 - 851045 - | Helix-turn-helix type 11 domain protein Dhaf_0765 852643 - 852023 - | hypothetical protein TERM 1209 852203 - 852214 + g 70 -2.2 -4.8622 | GATTCTATAATGATG GGCA GCAT TGTC TTTTTCATTGAAAGC Dhaf_0766 853133 - 852630 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 1210 852699 - 852711 + g 80 -4.8 -5.12068 | ATAAAAGGTTACTCT TGCC CAGCT GGCA TTTTTATTGAATATC TERM 1211 853280 - 853229 - R 86 -9.9 -4.0274 | gap 2, opp_overlap 853228 853231, overlap 853260 TTCAGCATGAAACAA GACGGTTGATATTTG-GA-CATT TCACAAAG AATGTTCTCAAACATCAACCGTC ATTCAATTGGTGAAA Dhaf_0767 853783 - 853325 - | hypothetical protein TERM 1212 853750 - 853740 - G 71 -6.8 -4.30559 | AACAAAATGCCAAAA GCCA TAG TGGC AAAAAAACTTGCGTA Dhaf_0768 854558 - 853797 - | protein of unknown function DUF1212 TERM 1213 854183 - 854166 - G 88 -8.4 -4.70659 | overlap 854167 854168 GGTCAGACTGAAAAA GCCGCT GGCCAG AGCGGC CGCGATAAGCTGCAG TERM 1214 854409 - 854399 - G 80 -8.2 -4.3586 | GCAGGGATAGGAAAA GCCC TGT GGGC GTAACATAGCTGTGA TERM 1215 855402 - 855388 - g 74 -10 -3.61356 | ATCATCGATGCCAAA TCCGGA GTT TCCGGA GCCGGGCGGGGCGTT Dhaf_0769 854839 - 855894 + | N-acetyl-gamma-glutamyl-phosphate reductase Dhaf_0770 855966 - 857192 + | arginine biosynthesis bifunctional protein ArgJ Dhaf_0771 857294 - 858190 + | acetylglutamate kinase Dhaf_0772 858225 - 859424 + | acetylornithine and succinylornithine aminotransferase Dhaf_0773 861171 - 859543 - | Succinate dehydrogenase TERM 1216 861503 - 861489 - g 73 -2.1 -5.00895 | overlap 861491 TTGATGAGAGAAAAA GACGT GGATG ACATC ACGGTGAAAGAACTG TERM 1217 861802 - 861792 - g 71 -6.8 -4.27441 | opp_overlap 861792 ATGATGACCAATAAA GGAG TAT CTCC TTTTCTGCAAAAAGC TERM 1218 861792 - 861802 + G 74 -6.8 -4.36914 | opp_overlap 861792 ATGATGACCAATAAA GGAG TAT CTCC TTTTCTGCAAAAAGC Dhaf_0774 861423 - 861938 + | transcriptional regulator, TetR family TERM 1219 863410 - 863426 + G 73 -7.9 -3.98661 | opp_overlap 863412, overlap 863412 CGTCATGCCTATGAA AAGCGGG CAG CCCGCTA TTTCTCCTGGCTCTG TERM 1220 863412 - 863424 + G 77 -10.5 -3.5812 | opp_overlap 863412, overlap 863410 TCATGCCTATGAAAA GCGGG CAG CCCGC TATTTCTCCTGGCTC TERM 1221 863424 - 863412 - g 85 -10.5 -4.26076 | opp_overlap 863412 863410 TCATGCCTATGAAAA GCGGG CAG CCCGC TATTTCTCCTGGCTC Dhaf_0775 862066 - 863934 + | transcriptional regulator, XRE family TERM 1222 864072 - 864097 + F 93 -11.9 -3.64431 | AGATTTTGATGCCAG GCCTGTTCACA TGAT TGTGGGCAGGC TTATGTATAATATTC TERM 1223 864116 - 864139 + F 76 -2.5 -5.35224 | TGTATAATATTCATG GTTTCTGTA GAAAGA TAAAGAAAC TTTTGTTTTTGTGAA TERM 1224 864376 - 864349 - g 78 -11.4 -2.92613 | opp_overlap 864356, overlap 864346 864356 GGGGATGGTAAAGGA GGAGAGATCCAT CCGG ATGGATCTCTCG ATAATGAAGAGGCTA Dhaf_0776 864181 - 864543 + | hypothetical protein TERM 1225 865117 - 865103 - g 73 -7.1 -4.18018 | opp_overlap 865104 GGCCGGGAGGGAAAA GGCTG GGTCG CAGCC TCAGTCCAGCTTATA Dhaf_0777 864592 - 866292 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 1226 866421 - 866451 + F 89 -11.9 -3.37344 | gap 1, opp_overlap 866418 866417 866421 GATAAATGAAAGCAA GGCAGGCCGGC-GT TGAA ACTGTCGGCCTGTC TTAATTGAATCAAGG TERM 1227 866764 - 866722 - f 100 -14.6 -4.06611 | gap 1, opp_overlap 866725 866727 866731, overlap 866713 866725 866727 TAACTATAATAACAA TGATATTAAGCCTGTTTGC GCGTCT GCAAACAGGCTTAATAT-A TAATGGTCATAGGCA TERM 1228 866725 - 866762 + F 100 -19.5 -2.83715 | opp_overlap 866713 866722 866725 866727, overlap 866727 866731 CTATAATAACAATGA TATTAAGCCTGTTTGCG CGTC TGCAAACAGGCTTAATA TATAATGGTCATAGG TERM 1229 866762 - 866725 - f 100 -18.8 -3.05496 | opp_overlap 866725 866727 866731, overlap 866713 866722 866727 CTATAATAACAATGA TATTAAGCCTGTTTGC GCGTCT GCAAACAGGCTTAATA TATAATGGTCATAGG TERM 1230 866727 - 866760 + F 100 -17.7 -2.96692 | opp_overlap 866713 866725 866722 866727, overlap 866725 866731 ATAATAACAATGATA TTAAGCCTGTTTGCG CGTC TGCAAACAGGCTTAA TATATAATGGTCATA TERM 1231 866760 - 866727 - f 100 -17 -3.07232 | opp_overlap 866727 866725 866731, overlap 866713 866725 866722 ATAATAACAATGATA TTAAGCCTGTTTGC GCGTCT GCAAACAGGCTTAA TATATAATGGTCATA TERM 1232 866731 - 866756 + F 100 -14.1 -3.34088 | opp_overlap 866727 866725 866722, overlap 866727 866725 TAACAATGATATTAA GCCTGTTTGCG CGTC TGCAAACAGGC TTAATATATAATGGT Dhaf_0778 866843 - 867223 + | hypothetical protein Dhaf_0779 867254 - 868954 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 1233 869012 - 868986 - T 100 -17.4 -4.10331 | opp_overlap 868986 GTAAGGAAGTATAAA GGGAGCACATCA TGG CGATGTGCTCCC TTTTCATGGAATCAA TERM 1234 868986 - 869012 + T 100 -16.7 -4.26903 | opp_overlap 868986 GTAAGGAAGTATAAA GGGAGCACATC ATGGC GATGTGCTCCC TTTTCATGGAATCAA Dhaf_0780 869151 - 869032 - | hypothetical protein TERM 1235 869466 - 869489 + G 75 -5.2 -4.7497 | gap 1, opp_overlap 869459, overlap 869466 869467 AATGAAGAGCTGACA GT-GGCTTGGC TAG GCCATGCCGGC TTTTTAATAACTCAA Dhaf_0781 869286 - 869522 + | hypothetical protein Dhaf_0782 870853 - 869501 - | transposase IS4 family protein TERM 1236 869641 - 869627 - G 75 -5.7 -4.5032 | TAGATTAAGAACAAA CGTCA TTAAC TGACG TAGTGCTGTTTTCAA TERM 1237 871269 - 871250 - g 70 -10 -3.20164 | gap 1, opp_overlap 871245 871250, overlap 871245 TTACAGCCAAGGGAA CCCGCTCCC TTT GGGAG-GGG CTGAATTATAAAACT TERM 1238 871488 - 871468 - g 88 -8.3 -4.70659 | GGCTATACGGAAAAA TTCCAGCAA CAA TTGCGGGAA ATGGAGATTGAGTTG Dhaf_0783 871069 - 871746 + | hypothetical protein TERM 1239 871802 - 871750 - T 100 -33.9 -3.77832 | opp_overlap 871755 871758, overlap 871755 871758 GTGCAAAGTTAATAA GCAAATAAGCCAGGGGGCGTTCA TGTGTGG TGAACGCCCCCTGGCTTATTTGC TGAGGAAAACCGATT TERM 1240 871755 - 871797 + T 100 -27.3 -3.72576 | opp_overlap 871750 871755 871758, overlap 871758 AAGTTAATAAGCAAA TAAGCCAGGGGGCGTTCAT GTGTG GTGAACGCCCCCTGGCTTA TTTGCTGAGGAAAAC TERM 1241 871797 - 871755 - T 100 -26.6 -4.09292 | opp_overlap 871755 871758, overlap 871750 871758 AAGTTAATAAGCAAA TAAGCCAGGGGGCGTTCA TGTGTGG TGAACGCCCCCTGGCTTA TTTGCTGAGGAAAAC TERM 1242 871758 - 871794 + T 100 -24.6 -4.00042 | opp_overlap 871758 871755 871750, overlap 871755 TTAATAAGCAAATAA GCCAGGGGGCGTTCAT GTGTG GTGAACGCCCCCTGGC TTATTTGCTGAGGAA TERM 1243 871794 - 871758 - T 100 -23.9 -4.15577 | opp_overlap 871755 871758, overlap 871755 871750 TTAATAAGCAAATAA GCCAGGGGGCGTTCA TGTGTGG TGAACGCCCCCTGGC TTATTTGCTGAGGAA Dhaf_0784 872533 - 871898 - | hypothetical protein Dhaf_0785 872723 - 872490 - | hypothetical protein Dhaf_0786 873591 - 872749 - | band 7 protein TERM 1244 875729 - 875709 - g 72 -11.1 -2.64962 | overlap 875700 875708 ACACTACCAAGGAAC CCCTTGTCC TGC GGACATGGG TAGAGGGAGGCACCT Dhaf_0787 873962 - 875764 + | VanW family protein TERM 1245 875850 - 875797 - T 100 -18.4 -4.9792 | opp_overlap 875798 875799, overlap 875799 GAGGGGACATAAAAA GAGGAGACAGGTACCATGATTCAA CTTAAT TTGAATCACGGTACCTGTCCCCAT TTTTCACTTTTAACC TERM 1246 875798 - 875849 + T 100 -17.5 -4.87318 | opp_overlap 875797 875799, overlap 875799 AGGGGACATAAAAAG AGGAGACAGGTACCATGATTCAA CTTAAT TTGAATCACGGTACCTGTCCCCA TTTTTCACTTTTAAC TERM 1247 875848 - 875799 - T 100 -25.4 -4.11141 | opp_overlap 875798 875799, overlap 875797 GGGGACATAAAAAGA GGAGACAGGTACCATGATTCAA CTTAAT TTGAATCACGGTACCTGTCCCC ATTTTTCACTTTTAA TERM 1248 875799 - 875848 + T 100 -21 -3.51307 | opp_overlap 875799 875797, overlap 875798 GGGGACATAAAAAGA GGAGACAGGTACCATGATTCAA CTTAAT TTGAATCACGGTACCTGTCCCC ATTTTTCACTTTTAA Dhaf_0788 876204 - 875860 - | Cupin 2 conserved barrel domain protein Dhaf_0789 877638 - 876373 - | putative transcriptional regulator, PucR family TERM 1249 876535 - 876518 - G 70 -9.9 -3.14527 | overlap 876516 GAATTGCGATGAATA TTCAGCG AGGC CGCTGAA GAGGTGGTGTTTTTG TERM 1250 877464 - 877478 + g 87 -12.8 -3.28791 | CAGGATCATCCTCTA CGGGGG ATT CCCCCG TTATAGCCAGGACAT Dhaf_0790 877849 - 879015 + | major facilitator superfamily MFS_1 TERM 1251 879170 - 879199 + T 100 -13 -4.87626 | opp_overlap 879170 GGAACATGTTAAAAA GCACGATAATGG ATTGAG CCATTGTCGTGC TTTTTAATATTCAGG TERM 1252 879199 - 879170 - T 100 -10.8 -4.66953 | opp_overlap 879170 GGAACATGTTAAAAA GCACGATAATGG ATTGAG CCATTGTCGTGC TTTTTAATATTCAGG Dhaf_0792 880560 - 879670 - | protein of unknown function DUF6 transmembrane TERM 1253 880704 - 880749 + r 100 -18.5 -4.25104 | opp_overlap 880706, overlap 880696 880706 GATCGGTCAATGGAA AAGGCCGTTGTTCACTGAACG CTAA CATTTAGTGAACAACGGCCTC TTTTGATGCAAGGCA TERM 1254 880706 - 880747 + r 100 -21.1 -3.73042 | opp_overlap 880706, overlap 880696 880704 TCGGTCAATGGAAAA GGCCGTTGTTCACTGAACG CTAA CATTTAGTGAACAACGGCC TCTTTTGATGCAAGG TERM 1255 880747 - 880706 - R 100 -21.1 -4.27316 | opp_overlap 880696 880706 880704 TCGGTCAATGGAAAA GGCCGTTGTTCACTGAACG CTAA CATTTAGTGAACAACGGCC TCTTTTGATGCAAGG Dhaf_0793 881990 - 880779 - | hypothetical protein TERM 1256 880904 - 880885 - G 81 -10.8 -3.61715 | GACTCTTCGGAAGAA GTACCTTC ATAG GAAGGTAC GGAAGGGGAATGGTA TERM 1257 881662 - 881648 - G 88 -2.1 -5.75342 | TTCCTGTAAAAAAAA CACTG CCTAT CAGTA TGCTCAATACCATAA TERM 1258 881944 - 881962 + g 93 -4.6 -5.52986 | overlap 881947 AGAGGGAGGGCCATT CTCTTGAA AGT TTCAATAG TTTTTTTCATGCGGT TERM 1259 882369 - 882357 - g 100 -6.2 -5.9663 | overlap 882358 882359 AAAGAGGAAAAAAAA GGGG GGACT CCCC ATCCCATCCTCCAAG TERM 1260 882369 - 882358 - g 73 -7.2 -4.14318 | overlap 882357 882359 AAGAGGAAAAAAAAG GGGG GACT CCCC ATCCCATCCTCCAAG TERM 1261 882448 - 882472 + G 71 -2.9 -4.85782 | gap 1 TTGCGTTTGAAGCCG GCATG-CTTC AGTTAG GAGGGCATGC TTTATTTTTGAGCAA Dhaf_0794 882237 - 883178 + | ornithine carbamoyltransferase Dhaf_0795 883316 - 884521 + | Argininosuccinate synthase TERM 1262 884570 - 884584 + F 100 -12.8 -4.67982 | opp_overlap 884570 GATAAGAGAGAGAAA GCGCCC TCG GGGCGC TTTTCTTACATGAAA TERM 1263 884584 - 884570 - f 100 -12.8 -4.22949 | opp_overlap 884570 GATAAGAGAGAGAAA GCGCCC TCG GGGCGC TTTTCTTACATGAAA Dhaf_0796 884628 - 886013 + | argininosuccinate lyase Dhaf_0797 886287 - 887744 + | nicotinate phosphoribosyltransferase TERM 1264 887775 - 887757 - f 100 -13.2 -4.57569 | opp_overlap 887748 TGATTTGTTCAAAAA GCGGTTCA TAG TGAACCGC TTCAAGGAATATCTT Dhaf_0798 887807 - 888574 + | NAD+ synthetase Dhaf_0799 888686 - 889366 + | Phosphoribosylaminoimidazolesuccinocarboxamide synthase Dhaf_0800 889394 - 889969 + | hypothetical protein TERM 1265 889969 - 890003 + T 100 -9.3 -4.59109 | opp_overlap 889973, overlap 889973 ATCTGTCACTATGTA AAAAGGAATGGCCTC TATAT GGGGCCATTCCTTAG TTTTTCGAACCTGTC TERM 1266 889999 - 889973 - T 100 -12.3 -4.68593 | opp_overlap 889969 889973 GTCACTATGTAAAAA GGAATGGCCTC TATAT GGGGCCATTCC TTAGTTTTTCGAACC TERM 1267 889973 - 889999 + T 100 -14.5 -3.80855 | opp_overlap 889973, overlap 889969 GTCACTATGTAAAAA GGAATGGCCTC TATAT GGGGCCATTCC TTAGTTTTTCGAACC Dhaf_0801 890358 - 890017 - | hypothetical protein TERM 1268 890509 - 890476 - R 74 -6.7 -4.25681 | AGGCAATGTAAGAAA GCCCTGAAATACAGC AAAT ACTGTGATTCAAGGC TAAGGAATCTAAAAC Dhaf_0802 891882 - 890575 - | UDP-N-acetylmuramate/alanine ligase Dhaf_0803 892217 - 892594 + | Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase-like protein TERM 1269 892650 - 892632 - T 91 -5.3 -5.73339 | opp_overlap 892632 ATAAGGATAAAAAAA GTTCCCT TAAGT AAGGAAC TTTTTTTGTTTGCCT TERM 1270 892632 - 892650 + T 95 -3.1 -5.96894 | opp_overlap 892632 ATAAGGATAAAAAAA GTTCCCT TAAGT AAGGAAC TTTTTTTGTTTGCCT Dhaf_0804 893402 - 892686 - | hypothetical protein TERM 1271 892969 - 892979 + g 73 -5.4 -4.63184 | AGCAGAAACCAGCTG GTGA AAA TCAC TTTTTGCCCTGAATT TERM 1272 893153 - 893136 - G 71 -2.6 -4.946 | overlap 893151 ACGAAAGATGAAAAA GGCCGA GGCAAG CCAGCC AAAGCCCACATGCAT TERM 1273 893364 - 893382 + g 100 -3.8 -6.19302 | overlap 893368 CTTGCGGATTTTGAG CTGGGGTT GGG AACCTTGG TTTTTTTTATTGTAT Dhaf_0805 894892 - 893495 - | nickel-dependent hydrogenase large subunit Dhaf_0806 896022 - 894895 - | hydrogenase (NiFe) small subunit HydA TERM 1274 896114 - 896153 + r 95 -7.8 -4.946 | opp_overlap 896116, overlap 896116 TAGTTATGAATTAAA AACCGCTGTCCAATGAAC TTAA GTCCCTTGAACAGCGGTC TTTTTAATGTTTAAT TERM 1275 896116 - 896151 + r 91 -10.4 -4.07993 | opp_overlap 896116, overlap 896114 GTTATGAATTAAAAA CCGCTGTCCAATGAAC TTAA GTCCCTTGAACAGCGG TCTTTTTAATGTTTA TERM 1276 896151 - 896116 - R 100 -14.8 -4.90266 | opp_overlap 896116 896114 GTTATGAATTAAAAA CCGCTGTCCAATGAAC TTAA GTCCCTTGAACAGCGG TCTTTTTAATGTTTA Dhaf_0807 897589 - 896168 - | hypothetical protein TERM 1277 897336 - 897354 + g 73 -8.2 -3.80573 | ATATTGCCGTCCCAA TCGATTTG GAC CAGATCGA TTTGATCCTGATAAC Dhaf_0808 899199 - 897709 - | sodium/sulphate symporter TERM 1278 898905 - 898894 - G 70 -2.2 -4.95484 | overlap 898899 TACCATGAAATAAAA GACA TCGC TGCC CCAGCCCATGGCCAC TERM 1279 899224 - 899237 + r 70 -5.3 -4.45168 | opp_overlap 899224 CTCCTGTATTAAAAT GTGAT TGTA ATCAC TTTCTATTTTAAAGA TERM 1280 899341 - 899305 - R 73 -5.5 -4.67556 | gap 1, opp_overlap 899314, overlap 899308 899314 AGAATATGTGAAAAA TAATATAAACACAAGA TAAGCT TCTTGTGTTTATAC-A GAGCACTGATGATTG TERM 1281 899339 - 899308 - R 100 -11.9 -4.43351 | opp_overlap 899314, overlap 899305 899314 ATATGTGAAAAATAA TATAAACACAAGA TAAGCT TCTTGTGTTTATA CAGAGCACTGATGAT TERM 1282 899333 - 899314 - R 74 -6.5 -4.48869 | opp_overlap 899314, overlap 899308 899305 GAAAAATAATATAAA CACAAGA TAAGCT TCTTGTG TTTATACAGAGCACT Dhaf_0809 900342 - 899377 - | transcriptional regulator, LysR family TERM 1283 899920 - 899931 + g 78 -5.8 -4.69664 | opp_overlap 899913 GGATATCACCCCGAG GGAG TAGA CTCC TTTTTCCATCATGTC Dhaf_0810 901291 - 900368 - | transcriptional regulator, LysR family TERM 1284 901004 - 900994 - G 73 -4.6 -4.78764 | CAAAGGCATTAAAAA CAGC TGG GCCG AGAGCTAAACTTATA TERM 1285 901474 - 901416 - H 82 -10.5 -3.64902 | gap 1, opp_overlap 901416 901423, overlap 901423 AAGATTAGAAAGTAA CGAGAAAGGGAGCGC-TCTTAGCTAC AGTTAAAA GTAGTTCAGAAGCACTCCCTTTTTCG TTTGGGTAACGAAGT TERM 1286 901416 - 901474 + H 100 -12.7 -3.64822 | gap 1, opp_overlap 901416 901423, overlap 901423 AAGATTAGAAAGTAA CGAGAAAGGGAGCGCT-CTTAGCTAC AGTTAAAA GTAGTTCAGAAGCACTCCCTTTTTCG TTTGGGTAACGAAGT TERM 1287 901423 - 901467 + H 82 -5.8 -5.00138 | gap 1, opp_overlap 901423 901416, overlap 901416 GAAAGTAACGAGAAA GGGAGCGCT-CTTAGCTAC AGTTAAAA GTAGTTCAGAAGCACTCCC TTTTTCGTTTGGGTA TERM 1288 901504 - 901519 + H 76 -7.6 -4.15222 | opp_overlap 901504 901493 TAGACTGGTTATAAA TTCCTG CGTC CAGGAA TTTATTACGCAACAT TERM 1289 901519 - 901504 - H 72 -7.6 -3.87373 | opp_overlap 901504, overlap 901493 TAGACTGGTTATAAA TTCCTG CGTC CAGGAA TTTATTACGCAACAT TERM 1290 902159 - 902143 - g 100 -6.5 -6.01725 | overlap 902145 AATAAAAACAAAAAA GAGGTCA TTC TGACCAC GTGGATGGAGCATCA TERM 1291 902157 - 902145 - g 81 -7.7 -4.585 | overlap 902143 TAAAAACAAAAAAGA GGTCA TTC TGACC ACGTGGATGGAGCAT Dhaf_0811 901777 - 903135 + | Cysteine desulfurase TERM 1292 903271 - 903290 + T 86 -10 -4.0057 | overlap 903269 ATATATTTTTTCTTC CCCTGTCA TAAC TGGCAGGG TCTTATTTTTTTGGC TERM 1293 903398 - 903419 + T 100 -13.1 -3.33696 | opp_overlap 903398, overlap 903401 TCGTGAAAATGAAAA GAATCCCCA CGTC TGGGGATTC TTCATTGCGCAAGCC TERM 1294 903419 - 903398 - T 100 -13.1 -4.67038 | opp_overlap 903398 903401 TCGTGAAAATGAAAA GAATCCCCA CGTC TGGGGATTC TTCATTGCGCAAGCC TERM 1295 903401 - 903416 + T 78 -9 -3.81146 | opp_overlap 903398, overlap 903398 TGAAAATGAAAAGAA TCCCCA CGTC TGGGGA TTCTTCATTGCGCAA TERM 1296 903645 - 903621 - T 76 -10.9 -2.55784 | opp_overlap 903624, overlap 903620 903624 TAACTTAAGTAACAG CAACAGAAACA AGC TATTTCTGTTG ACTTCGAGAAAGAAA TERM 1297 903775 - 903794 + T 100 -8.6 -4.98128 | overlap 903783 CCAGTTGAATCCTTA TCCTGCAA GAAA TTGCGGGA TTTCTTTTTCATTCT TERM 1298 903783 - 903798 + T 70 -2.6 -4.96646 | overlap 903775 ATCCTTATCCTGCAA GAAATT GCGG GATTTC TTTTTCATTCTGTCG TERM 1299 903831 - 903868 + T 80 -9.9 -3.60475 | opp_overlap 903836, overlap 903834 903836 TGATTCCAGAGTATG CAGAAGGCTGTTGACAT TGTA AAGTCAGCAGCCTCTTG TTTAGCCTGAAGGTT TERM 1300 903834 - 903865 + T 74 -8 -3.9392 | opp_overlap 903836, overlap 903831 903836 TTCCAGAGTATGCAG AAGGCTGTTGACAT TGTA AAGTCAGCAGCCTC TTGTTTAGCCTGAAG TERM 1301 903836 - 903863 + T 80 -10.6 -3.55946 | opp_overlap 903836, overlap 903834 903831 CCAGAGTATGCAGAA GGCTGTTGACAT TGTA AAGTCAGCAGCC TCTTGTTTAGCCTGA TERM 1302 903871 - 903884 + T 71 -3.1 -4.99035 | CAGCAGCCTCTTGTT TAGCC TGAA GGTTA TTTTTATATAAATAG Dhaf_0812 904493 - 903888 - | hypothetical protein Dhaf_0813 905796 - 904522 - | hydrogenase large subunit domain protein Dhaf_0814 907558 - 906257 - | transposase IS116/IS110/IS902 family protein TERM 1303 906514 - 906540 + g 71 -2.8 -4.90778 | overlap 906522 TAAACAGAATTCTTC TCCCGATCCGTG TGC CGCGTTTCGAGA TTTTATTTCGGTCAC TERM 1304 909073 - 909055 - g 73 -4.5 -4.69027 | AAAGCTATTGAAAAA TGGGATG GCAAA CTTCCCA ATGTTACCGGTGGAG Dhaf_0815 908287 - 909123 + | band 7 protein TERM 1305 909145 - 909183 + F 78 -9.1 -3.90318 | opp_overlap 909155, overlap 909148 TAGTCAAAGGTTTTT TAC-GCAGAAAGCCACC CTTGACA GGTGGCTTTC-GCTGTA TTTATAACCTAATAC TERM 1306 909148 - 909179 + F 81 -11 -3.34244 | gap 1, opp_overlap 909155, overlap 909145 TCAAAGGTTTTTTAC GCAGAAAGCCACC CTTGACA GGTGGCTTTC-GC TGTATTTATAACCTA TERM 1307 909173 - 909155 - f 74 -8.1 -3.91897 | opp_overlap 909148 909145 TTTTTTACGCAGAAA GCCACCC TTGAC AGGTGGC TTTCGCTGTATTTAT TERM 1308 909670 - 909659 - g 100 -4.4 -5.88197 | overlap 909660 GCAAATAGAAAAAAA TCTC TTGA GAGA AGCCGAAGCAACCGC TERM 1309 909866 - 909851 - g 77 -4.6 -4.9934 | ACAAGATTATAAAAA GGCCGA TGAA TTGGCC GAACTTGCTATGGCA Dhaf_0816 909297 - 909965 + | hypothetical protein Dhaf_0817 911179 - 909974 - | major facilitator superfamily MFS_1 TERM 1310 911197 - 911222 + r 91 -4.7 -5.71638 | opp_overlap 911204, overlap 911199 911200 AAATAACCCCTCTTC CACCAGAGCTT AGAC AAGCTCTGATA TTTTTTTAGTTCTTA TERM 1311 911199 - 911220 + r 78 -7.3 -4.46828 | opp_overlap 911204, overlap 911197 911200 ATAACCCCTCTTCCA CCAGAGCTT AGAC AAGCTCTGA TATTTTTTTAGTTCT TERM 1312 911200 - 911219 + r 81 -10.8 -3.25657 | opp_overlap 911204, overlap 911199 911197 TAACCCCTCTTCCAC CAGAGCTT AGAC AAGCTCTG ATATTTTTTTAGTTC Dhaf_0818 911586 - 911206 - | transcriptional regulator, BadM/Rrf2 family TERM 1313 911373 - 911363 - G 100 -5.4 -5.6473 | ATAATATCAAAAAAA GAGA TCT TCTC CCAATGGGGACCTAA TERM 1314 911818 - 911828 + G 73 -4.6 -4.8048 | ATTAATACTCATCAT GGCC AAC GGTC TTTTTGCTATGACGG TERM 1315 912220 - 912230 + G 71 -8.2 -3.72037 | TTACTTTGCCAAGGC GGGG CGC CCCC TTATCTGGTTTTTAA Dhaf_0819 911771 - 913096 + | protein of unknown function DUF21 TERM 1316 914287 - 914263 - g 71 -7.1 -4.07687 | AGCTCTGCCTCAAAA GGGATCTCGGA TAC TCTGATATCCC AAACCACGGCATTAA Dhaf_0820 913240 - 914529 + | Putative protein of poly-gamma-glutamate biosynthesis (capsule formation)-like protein TERM 1317 914568 - 914544 - f 74 -4.2 -5.06103 | opp_overlap 914548, overlap 914548 AGAAGTCTGAAAAAA TGAAGACGGC GATAA GCCGTCTTTT GTTGTGGGAAATTCC TERM 1318 914548 - 914564 + F 100 -9.4 -4.77165 | opp_overlap 914544 914548 GTCTGAAAAAATGAA GACGGC GATAA GCCGTC TTTTGTTGTGGGAAA TERM 1319 914564 - 914548 - f 83 -9.4 -3.93166 | opp_overlap 914548, overlap 914544 GTCTGAAAAAATGAA GACGGC GATAA GCCGTC TTTTGTTGTGGGAAA Dhaf_0821 914664 - 914975 + | hypothetical protein Dhaf_0822 915045 - 915806 + | N-acetylmuramoyl-L-alanine amidase family 2 TERM 1320 915879 - 915852 - T 75 -5.6 -4.72556 | opp_overlap 915852 CGAAAAATTATAAAA GACGAGACTT CCATCCTT ACGTCTCGTC TTTCTACTTCATTAT Dhaf_0823 916928 - 915918 - | glycosyl transferase group 1 TERM 1321 916018 - 916041 + g 73 -8.1 -4.08767 | opp_overlap 916018 ATATGTTTCGTCAAA GGCTCTGGC GAGAAG GTCAGGGCC TTTTCCAAGGCTGGG TERM 1322 916799 - 916836 + g 88 -7 -5.055 | ATTCTTCAAGCTGGA CCTTGGGGTTAAGG GATAAAAAGA CCTGTACCCCAAGG TTTTTTAAAGCTTGA Dhaf_0824 917130 - 916930 - | hypothetical protein Dhaf_0825 918653 - 917118 - | hypothetical protein TERM 1323 918678 - 918705 + r 100 -9.8 -5.055 | overlap 918679 CTCCTGTGATGTTGG ACTAGGGCTGCC TAAT GACAGCCCTAGC TTTTTTAGACGTTAA TERM 1324 918679 - 918704 + r 100 -13.3 -3.62577 | overlap 918678 TCCTGTGATGTTGGA CTAGGGCTGCC TAAT GACAGCCCTAG CTTTTTTAGACGTTA Dhaf_0826 919397 - 918744 - | hypothetical protein Dhaf_0827 920519 - 919467 - | glycosyl transferase group 1 TERM 1325 920631 - 920604 - R 100 -10.6 -4.69214 | opp_overlap 920607, overlap 920607 TATGTAAGAAATAAA GAAGGCGTAACC ATGA GGTCACGCCTTT ACTAATTTCGAGGGG TERM 1326 920628 - 920607 - R 100 -12.3 -4.43668 | opp_overlap 920607, overlap 920604 GTAAGAAATAAAGAA GGCGTAACC ATGA GGTCACGCC TTTACTAATTTCGAG TERM 1327 920607 - 920628 + r 84 -10.1 -3.8901 | opp_overlap 920607 920604 GTAAGAAATAAAGAA GGCGTAACC ATGA GGTCACGCC TTTACTAATTTCGAG Dhaf_0828 921499 - 920675 - | SCP-like extracellular TERM 1328 922876 - 922854 - g 100 -9.9 -5.243 | gap 1, opp_overlap 922854 TAAACGATCAAAAAA GGCC-CGAGA TCGA TCTCGAGGCC TGCATTCGCTGTTTC Dhaf_0829 921818 - 922966 + | protein of unknown function DUF362 Dhaf_0830 923306 - 922983 - | MazG nucleotide pyrophosphohydrolase Dhaf_0831 924782 - 923424 - | transposase IS1182 family protein TERM 1329 924848 - 924858 + H 86 -6.8 -5.04601 | ATTTCGAGATGTTGG GGAG GTA CTCC TTTTTAATTTGTCAA TERM 1330 924944 - 924930 - H 90 -4.4 -5.64274 | TCAGTTAGAAAAAAA TTAATA AAT TATTAA GGTGAAGTGTGCTAT Dhaf_0832 925076 - 925891 + | protein of unknown function DUF147 TERM 1331 927160 - 927130 - g 79 -9.6 -3.9122 | overlap 927156 GATCCCCCTAAAGAA CCGGATAATCCGGG AAC CCCAGGTAACCCGG GAAATCCAGGCAATT Dhaf_0833 925894 - 927207 + | YbbR family protein TERM 1332 928192 - 928173 - g 70 -10 -3.12482 | overlap 928171 TAACACCAGCCAATA TGGAGTGG AATT CCACCCCA AACTAGGCCCTGCCG TERM 1333 928292 - 928311 + G 70 -10 -3.1505 | opp_overlap 928283 GCAAAGTGGTGGCCG CCGCTTCA GACC TGGAGCGG TTGGTAACCAATGGT Dhaf_0834 927265 - 928869 + | FAD dependent oxidoreductase TERM 1334 929181 - 929168 - g 70 -9.5 -3.25918 | opp_overlap 929166, overlap 929166 929164 TAATCGGCAAAGATA CCCGG ATCT CCGGG GATATGTTGGAAGCG Dhaf_0835 929023 - 930360 + | phosphoglucosamine mutase TERM 1335 930386 - 930365 - f 80 -8.9 -3.93658 | AAGAGCTTTAAAGAA TTTTGGTTA AATT TAACCAAAA GAAAATATTTACTGT TERM 1336 930428 - 930468 + F 70 -9.3 -2.77899 | gap 1, opp_overlap 930428, overlap 930425 AAAGAAAACGTATAA TGTTCATGTAC-CTCTAT CTAATT GTGGAGCGTACATGAACA TCCTTGATAGGGGAG TERM 1337 930730 - 930742 + F 78 -4.1 -5.11613 | AGCCTCAAGGAACGG GAGTA GTC TGCTC TTTTTTAGATGATCT TERM 1338 930787 - 930801 + F 100 -11.4 -5.69793 | opp_overlap 930782 CCAGAAAACTTTGAA CCGCTC GGA GAGCGG TTTTTTATTTGGTAT Dhaf_0836 930881 - 932704 + | glucosamine/fructose-6-phosphate aminotransferase, isomerizing TERM 1339 932728 - 932767 + F 75 -8.5 -3.85256 | gap 1, opp_overlap 932728 ATGCTATTGATAAAA GCCCAGGAAT-GGCGCCG TTTTT CGTCGCTTGGTCCTGGGC TTCTCTTTAAATATC TERM 1340 933021 - 933031 + G 74 -4 -4.86001 | opp_overlap 933021 AGCAGAATGTGAAAC CTTT TGA AAAG TTTTTCTCCGGTAGT Dhaf_0837 933002 - 933706 + | hypothetical protein TERM 1341 933767 - 933814 + T 100 -13.6 -3.08467 | gap 1, opp_overlap 933758 933766 933767 933771, overlap 933771 CTAAATGTTCAAAAT GGAACCCGTGGCA-GAATCGG CAGTGAT CCGGTTAATGCCACGGGTTTC TATATGCTTTCTGGC TERM 1342 933814 - 933767 - T 72 -9.2 -3.09772 | gap 1, opp_overlap 933767 933771, overlap 933758 933766 933771 CTAAATGTTCAAAAT GGAACCCGTGGCA-GAATCGG CAGTGAT CCGGTTAATGCCACGGGTTTC TATATGCTTTCTGGC TERM 1343 933771 - 933810 + T 93 -10.8 -4.19024 | gap 1, opp_overlap 933767 933766 933771, overlap 933767 ATGTTCAAAATGGAA CCCGTGGCA-GAATCGG CAGTGAT CCGGTTAATGCCACGGG TTTCTATATGCTTTC Dhaf_0838 934746 - 933829 - | transcriptional regulator, PadR-like family TERM 1344 934872 - 934835 - R 100 -5.5 -6.04953 | ATAGAAATAAAAAAA CCGTGGCGCTAACAG GGAGAAAT CCGATAGCATCACGG GCTTATTTAACTATA Dhaf_0839 935866 - 935009 - | homocysteine S-methyltransferase Dhaf_0840 936333 - 937274 + | cellulose-binding family II Dhaf_0841 937296 - 937418 + | hypothetical protein Dhaf_0842 937452 - 937982 + | hypothetical protein TERM 1345 938047 - 938086 + T 100 -15.2 -2.90199 | overlap 938051 TAAGCGATAGATTCT GGAAGCGGAAGCGTTAGT TTAA ACTAGTGTTTCCGCTTTC TGCTCTTTCATTAAG TERM 1346 938051 - 938082 + T 100 -12.4 -4.11033 | overlap 938047 CGATAGATTCTGGAA GCGGAAGCGTTAGT TTAA ACTAGTGTTTCCGC TTTCTGCTCTTTCAT Dhaf_0843 938318 - 938097 - | hypothetical protein Dhaf_0844 939425 - 938331 - | spore germination protein Dhaf_0845 940601 - 939432 - | germination protein, Ger(x)C family Dhaf_0846 942260 - 940638 - | GerA spore germination protein TERM 1347 942219 - 942239 + g 100 -6.2 -5.80248 | AGTATTCAGATGCAT CAACTTCA TGCCC TGGAGTTG TTTTTTTATATATTG TERM 1348 942352 - 942331 - H 77 -3.8 -5.10877 | ATAATAAACGAAAAA TACAAACT GCATAA AGTTCGTA GAGGCATTGAAAAAA Dhaf_0847 942416 - 942958 + | peptidase S26B, signal peptidase Dhaf_0848 942996 - 943973 + | ABC-type multidrug transport system ATPase component-like protein TERM 1349 944950 - 944960 + G 83 -4.6 -5.2853 | GAAGTAAGTATCCGT GGGG TGA TCCC TTTTATTTTTCAATC TERM 1350 945270 - 945282 + G 77 -4.1 -5.1356 | CGCCAATACGATTAT GGGTA GGA TACTC TTTTTATTAATACCG Dhaf_0849 943957 - 945348 + | hypothetical protein Dhaf_0850 945573 - 945905 + | Thioredoxin domain protein Dhaf_0851 945957 - 947177 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1351 947230 - 947196 - T 73 -3.8 -4.98531 | gap 3, opp_overlap 947196 947203 CGTTGAAATTAAAAA GAGGCAC-A--CTTTCC TGAG GGAAAGACTTGTGCCTC TTTTTAATGATTTAA TERM 1352 947196 - 947230 + T 70 -3.8 -4.84363 | gap 3, opp_overlap 947196, overlap 947203 CGTTGAAATTAAAAA GAGGCAC-A--CTTTCC TGAG GGAAAGACTTGTGCCTC TTTTTAATGATTTAA Dhaf_0852 947715 - 947242 - | hypothetical protein TERM 1353 947416 - 947438 + g 80 -6.3 -4.70887 | overlap 947411 AATGAATTCTGGAAT TGGTGGAAT ATCCA ATTCCTCCA TTTGTTTCTTCATCA Dhaf_0853 948044 - 947730 - | sulfur relay protein, TusE/DsrC/DsvC family Dhaf_0854 949313 - 948063 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1354 948302 - 948288 - G 71 -4.2 -4.78764 | GAAATCTATTAAAAA GGCTTT GTC ATAGCC GGATTCAATAAAACA Dhaf_0855 949602 - 949333 - | protein of unknown function DUF156 Dhaf_0856 950100 - 949870 - | hypothetical protein Dhaf_0857 950339 - 950536 + | hypothetical protein TERM 1355 950591 - 950563 - T 79 -7.6 -4.2803 | gap 1, opp_overlap 950563 CATCTCAACTCAAAA GACCGATT-AGAA ATTA CTCTTAATCGGTC TTTGCTCATTATCGA Dhaf_0858 951553 - 950624 - | transcriptional regulator, LysR family TERM 1356 951858 - 951848 - g 75 -5.4 -4.71828 | ATGTCATTAACAAAA TTGG ATT CCAA AAGTTTTGAAGAAAA Dhaf_0859 951833 - 952156 + | Thioredoxin domain protein Dhaf_0860 952217 - 953428 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1357 953455 - 953506 + T 100 -11.2 -5.24129 | gap 2, opp_overlap 953449 953455 TTGTAAAGACTACAA CTAAGTGGTAGAG-A-GGATTTCC CGGAAC GGATATCCATACTCTACCACTTGG TTTTTTATGAGGGAA TERM 1358 953506 - 953455 - T 73 -9 -3.56837 | gap 2, opp_overlap 953455, overlap 953449 TTGTAAAGACTACAA CTAAGTGGTAGAG-A-GGATTTCC CGGAAC GGATATCCATACTCTACCACTTGG TTTTTTATGAGGGAA Dhaf_0861 954903 - 953536 - | pyridoxal-phosphate dependent TrpB-like enzyme TERM 1359 954962 - 954946 - H 70 -3.7 -4.84363 | opp_overlap 954946 TGAAAGTATTAAAAA CTTCATT TTG ATTGAAG CTTTCTATCCCGAAA TERM 1360 955019 - 954993 - H 100 -9.5 -5.52347 | opp_overlap 954993, overlap 955013 AAGAAAATTAAAAAA GCCTTTGTCCC CTTAT AGGACAAAGAC TTCCATCTCTGCGAT TERM 1361 955457 - 955446 - H 75 -3 -5.08824 | TTTGTATTTAAAAAA GAAA GAGG TTTC CAATGAGTTTTCAAA TERM 1362 955674 - 955694 + G 72 -11.1 -2.52676 | opp_overlap 955669 955674 AGGTTATGAATCATA TCGTTGCGC GGA GCGCAACGC TGACTTGCCAAAGTA TERM 1363 955694 - 955674 - g 74 -11.1 -2.93901 | opp_overlap 955674, overlap 955669 AGGTTATGAATCATA TCGTTGCGC GGA GCGCAACGC TGACTTGCCAAAGTA Dhaf_0862 955460 - 955726 + | hypothetical protein TERM 1364 955820 - 955843 + F 100 -13.2 -5.52079 | opp_overlap 955809, overlap 955809 955811 ACTAGTGGTGTATGG CCACCTTCCT AATG AGGAGGGTGG TTTTTGTTTTAATAT Dhaf_0863 956042 - 956806 + | hypothetical protein TERM 1365 957022 - 957066 + G 80 -6.7 -4.68655 | gap 1, overlap 957019 957026 TTACAAAGGCATTAC CACTTGGGTATTTTCTATTC AAATCG GAAAAGAAAATACCC-ATTG TTTATTTTGGGATTG TERM 1366 957026 - 957063 + G 100 -13 -4.43397 | overlap 957019 957022 AAAGGCATTACCACT TGGGTATTTTCTATTC AAATCG GAAAAGAAAATACCCA TTGTTTATTTTGGGA TERM 1367 957147 - 957160 + G 70 -2.3 -4.92757 | CACATGCATGAAAGT GGATC ACCG GTTCC TTTTATTATTACTCG Dhaf_0864 956799 - 957434 + | hypothetical protein TERM 1368 957469 - 957488 + F 100 -12.2 -4.78848 | opp_overlap 957469 TTGAGGTAGTATTAA TCGGAGAG TGAT CTCTCCGA TTTTATGTTTGGGAG TERM 1369 957488 - 957469 - f 86 -12.2 -3.22298 | opp_overlap 957469 TTGAGGTAGTATTAA TCGGAGAG TGAT CTCTCCGA TTTTATGTTTGGGAG Dhaf_0865 957519 - 958265 + | hypothetical protein Dhaf_0866 958353 - 959516 + | hypothetical protein Dhaf_0867 959958 - 959530 - | protein of unknown function DUF1232 TERM 1370 960084 - 960041 - R 100 -11.8 -4.31164 | opp_overlap 960041 960033 GTTATATAAGACAAA TGTAGGGAATGACCCTGTGT TCTT ACGCAAGGGTATTCCCTACA TTCTCAATTTATCGG TERM 1371 960041 - 960084 + r 100 -14 -3.50047 | opp_overlap 960041, overlap 960033 GTTATATAAGACAAA TGTAGGGAATGACCCTGTGT TCTT ACGCAAGGGTATTCCCTACA TTCTCAATTTATCGG Dhaf_0868 961182 - 960124 - | nitrite and sulphite reductase 4Fe-4S region TERM 1372 961212 - 961241 + r 77 -10.7 -2.89793 | opp_overlap 961213, overlap 961209 CAGTTTATTTATAAA AGATGGCACACCC TATG GGGTGTACCATCA TAGTTATGTCCATAA TERM 1373 961240 - 961213 - R 100 -16.4 -4.42653 | opp_overlap 961212 961209 AGTTTATTTATAAAA GATGGCACACCC TATG GGGTGTACCATC ATAGTTATGTCCATA Dhaf_0869 962168 - 961245 - | diacylglycerol kinase catalytic region TERM 1374 961318 - 961285 - G 75 -5.3 -4.68593 | gap 1 GGTATTAGGGAAAAA TGGACGGGTGTAAATC CGG GATGTTC-CCCATCCA GCTCCAAGTAAGCCG TERM 1375 961827 - 961841 + g 75 -5.6 -4.7254 | opp_overlap 961828, overlap 961828 CAGAACTTCCAGCAA AGAGGG GAG CCCTCG TTTTTGATCGAGGGT TERM 1376 961840 - 961828 - G 74 -9.1 -3.75015 | opp_overlap 961827 961828 AGAACTTCCAGCAAA GAGGG GAG CCCTC GTTTTTGATCGAGGG Dhaf_0870 962602 - 962180 - | UspA domain protein Dhaf_0871 962876 - 963724 + | hypothetical protein Dhaf_0872 963820 - 964026 + | TOBE domain protein TERM 1377 964056 - 964099 + F 100 -22.1 -4.78764 | TTTGGGCAATCGGCT GATTACCTCCCAGGATAGA TATAAC TCTATTCTGGGAGGTAATC TTTTTAATAGGTTTG Dhaf_0873 964310 - 965146 + | undecaprenol kinase Dhaf_0874 965229 - 965786 + | LemA family protein Dhaf_0875 965822 - 966616 + | protein of unknown function DUF477 TERM 1378 966834 - 966817 - f 88 -9.9 -4.08064 | opp_overlap 966817 AATTGTTTGGGAAAA CCTTCTG ATTG CAGAAGG TTTTTTATTATGCAT TERM 1379 966817 - 966834 + F 100 -9.9 -5.56673 | opp_overlap 966817 AATTGTTTGGGAAAA CCTTCTG ATTG CAGAAGG TTTTTTATTATGCAT Dhaf_0876 966896 - 967192 + | protein of unknown function DUF77 TERM 1380 967279 - 967293 + GF 72 -10 -2.74514 | overlap 967281 CAAAATTCATGCTAC CATCCC CTG GGGATG TGATTCGGGCTTTAG TERM 1381 967929 - 967899 - gf 76 -7.4 -4.4078 | overlap 967900 CTTTTGGAACGAAAA GCTATGCCCTGGGC ACA GACCGGGGAACAGC AAAATGAAGGCTGAG TERM 1382 967916 - 967900 - gf 71 -8.7 -3.24146 | overlap 967899 TTTTGGAACGAAAAG CTATGCC CTG GGCACAG ACCGGGGAACAGCAA Dhaf_0877 967161 - 967943 + | binding-protein-dependent transport systems inner membrane component Dhaf_0878 967977 - 968996 + | NMT1/THI5 like domain protein Dhaf_0879 968977 - 969741 + | ABC transporter related TERM 1383 969752 - 969784 + F 100 -13.6 -5.07652 | opp_overlap 969759, overlap 969754 GCTAATAGGATTTAC TACCCAAGCTCTAT GAAAA GTAGAGCTTGGGTG TTTTATTTTAAAGGA TERM 1384 969754 - 969782 + F 100 -14 -4.16397 | opp_overlap 969759, overlap 969752 TAATAGGATTTACTA CCCAAGCTCTAT GAAAA GTAGAGCTTGGG TGTTTTATTTTAAAG Dhaf_0880 969872 - 970531 + | transcriptional regulator, Crp/Fnr family TERM 1385 970547 - 970573 + F 100 -13.2 -3.52506 | opp_overlap 970552, overlap 970552 TGAAGGGGCTTAGAT TAAAAGGTACTG TTT CAGTACCTTTTG TATTTGCATTTGCTT TERM 1386 970552 - 970568 + F 100 -10.9 -4.81359 | opp_overlap 970552, overlap 970547 GGGCTTAGATTAAAA GGTACTG TTT CAGTACC TTTTGTATTTGCATT TERM 1387 970568 - 970552 - f 100 -10.9 -4.34402 | opp_overlap 970552 970547 GGGCTTAGATTAAAA GGTACTG TTT CAGTACC TTTTGTATTTGCATT Dhaf_0881 970731 - 971231 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_0882 971224 - 973131 + | carbon-monoxide dehydrogenase, catalytic subunit Dhaf_0883 973152 - 974420 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1388 974427 - 974457 + F 100 -9.8 -5.1963 | CTTAAGTAACAAAAA GAGTGACATCTGAA GAT TTCGGGTGTTGCTC TTTTTCTTACTTAGA Dhaf_0884 974569 - 975555 + | NAD-dependent epimerase/dehydratase Dhaf_0885 975575 - 976264 + | Nucleotidyl transferase Dhaf_0886 976421 - 976771 + | hypothetical protein TERM 1389 977995 - 978005 + G 71 -8.2 -3.76168 | overlap 977986 977998 AACCGGGGCTACTGG CGGC GGA GCCG TTATTCCGTTCTCAT Dhaf_0887 976793 - 978493 + | Collagen triple helix repeat protein TERM 1390 978582 - 978604 + F 100 -9.2 -4.96848 | opp_overlap 978582, overlap 978601 978603 GACAGTGGTAGAAAA GGGAATCC AATAAGC GGATTCCC TTTTTATCTAAAAGA TERM 1391 978604 - 978582 - f 93 -9.9 -4.39426 | opp_overlap 978582 978601 978603 GACAGTGGTAGAAAA GGGAATCCA ATAAG CGGATTCCC TTTTTATCTAAAAGA Dhaf_0888 978647 - 979738 + | glycosyl transferase family 2 TERM 1392 979768 - 979807 + T 100 -20.2 -4.87807 | gap 1, opp_overlap 979760 CTATTAAGCTCCAGG GGGGCATCGCTGGGCTACT TAA AGTAGCC-GGCGATGCTCC TTTTTCGTATCTTAA TERM 1393 979867 - 979844 - T 100 -11.6 -5.26316 | CTATCCCATAAAAAA GGGGCCGGCC TGTG GGGCAGCCCC TTAGGGTCAAAACTA Dhaf_0889 980871 - 979888 - | glycosyl transferase group 1 TERM 1394 980733 - 980751 + g 71 -8.8 -3.73953 | TTAATTTCGCACGCA GGGGCC AGACCTG GGCCCC TTTACTGGGCATGAT Dhaf_0890 981058 - 981636 + | hypothetical protein Dhaf_0891 982644 - 981646 - | glycosyl transferase group 1 TERM 1395 981807 - 981835 + g 100 -9.5 -5.1101 | GCTGCTGAATATCGC TGGGGGGAACGAC AAG GCAGTTCTCCCCA TTTTTTGCATAGTCA TERM 1396 982609 - 982598 - G 80 -7.2 -4.61199 | opp_overlap 982597 982598 ATTTGATAGATAAAA CGGG TTCC CCCG GTTTCCAAACTCAAT Dhaf_0892 982768 - 983805 + | UDP-glucose/GDP-mannose dehydrogenase Dhaf_0893 983827 - 984747 + | NAD-dependent epimerase/dehydratase Dhaf_0894 984748 - 985455 + | glycosyl transferase family 2 Dhaf_0895 985459 - 986178 + | 40-residue YVTN family beta-propeller repeat protein TERM 1397 986239 - 986272 + F 100 -12.5 -5.60556 | opp_overlap 986251, overlap 986245 ATATGAAGATGGGCA GGGCATTGAAAAGGC TTTG GACTTTCCAATGCCC TTTTTATTTTATATT TERM 1398 986245 - 986278 + F 82 -6.9 -4.75289 | gap 1, opp_overlap 986251, overlap 986239 AGATGGGCAGGGCAT TGAAAA-GGCTTTGGA CTT TCCAATGCCCTTTTTA TTTTATATTATCATC TERM 1399 986271 - 986251 - f 88 -9.7 -4.1899 | opp_overlap 986239 986245 GCAGGGCATTGAAAA GGCTTTGGA CTT TCCAATGCC CTTTTTATTTTATAT Dhaf_0896 986508 - 987578 + | hypothetical protein TERM 1400 987599 - 987634 + F 100 -12.7 -3.46068 | overlap 987592 987603 AAAGCTGCTACCCCT GAGAGTTCAGGCGGA ATTAAA TCTGCCTGGACTTTC TCTTTAGCTTAGCAG TERM 1401 987603 - 987630 + F 93 -9.9 -4.3665 | overlap 987592 987599 CTGCTACCCCTGAGA GTTCAGGCGGA ATTAAA TCTGCCTGGAC TTTCTCTTTAGCTTA Dhaf_0897 987754 - 988908 + | C4-dicarboxylate transporter/malic acid transport protein TERM 1402 988996 - 988938 - T 100 -16.4 -3.09635 | opp_overlap 988941 988944 988949, overlap 988941 988944 988949 ATCTTTATCAGCTAA TTACAATAAAAGTACGGGACAAAGGT TTATTGT ACCTTGCTCCCGTACTTTTATTGTGA TTAAGAAAAGGTAGG TERM 1403 988993 - 988941 - T 100 -18.1 -2.76263 | opp_overlap 988941 988944 988949, overlap 988938 988944 988949 TTTATCAGCTAATTA CAATAAAAGTACGGGACAAAGGT TTATTGT ACCTTGCTCCCGTACTTTTATTG TGATTAAGAAAAGGT TERM 1404 988941 - 988993 + T 100 -18.1 -2.71011 | opp_overlap 988938 988941 988944 988949, overlap 988944 988949 TTTATCAGCTAATTA CAATAAAAGTACGGGACAAAGGT TTATTGT ACCTTGCTCCCGTACTTTTATTG TGATTAAGAAAAGGT TERM 1405 988944 - 988990 + T 100 -14 -3.50853 | opp_overlap 988941 988938 988944 988949, overlap 988941 988949 ATCAGCTAATTACAA TAAAAGTACGGGACAAAGGT TTATTGT ACCTTGCTCCCGTACTTTTA TTGTGATTAAGAAAA TERM 1406 988990 - 988944 - T 100 -14 -3.52919 | opp_overlap 988944 988941 988949, overlap 988941 988938 988949 ATCAGCTAATTACAA TAAAAGTACGGGACAAAGGT TTATTGT ACCTTGCTCCCGTACTTTTA TTGTGATTAAGAAAA TERM 1407 988949 - 988985 + T 100 -9.5 -4.84492 | opp_overlap 988949 988944 988941 988938, overlap 988944 988941 CTAATTACAATAAAA GTACGGGACAAAGGT TTATTGT ACCTTGCTCCCGTAC TTTTATTGTGATTAA TERM 1408 988985 - 988949 - T 100 -9.5 -4.84492 | opp_overlap 988944 988941 988949, overlap 988944 988941 988938 CTAATTACAATAAAA GTACGGGACAAAGGT TTATTGT ACCTTGCTCCCGTAC TTTTATTGTGATTAA Dhaf_0898 989917 - 989036 - | transcriptional regulator, LysR family Dhaf_0899 990205 - 990852 + | hypothetical protein TERM 1409 990890 - 990844 - T 88 -6.8 -5.18371 | opp_overlap 990849, overlap 990846 990849 TGTGATAAAACAAAA GAGAAGTAGAGTTTAAGTTC GTCAGTT GAACATAAACTCTACTTTTT AGGCTTAAGCTAAGG TERM 1410 990888 - 990846 - T 85 -9.4 -4.21317 | opp_overlap 990849, overlap 990844 990849 TGATAAAACAAAAGA GAAGTAGAGTTTAAGTTC GTCAGTT GAACATAAACTCTACTTT TTAGGCTTAAGCTAA TERM 1411 990885 - 990849 - T 93 -11.1 -4.17186 | opp_overlap 990849, overlap 990846 990844 TAAAACAAAAGAGAA GTAGAGTTTAAGTTC GTCAGTT GAACATAAACTCTAC TTTTTAGGCTTAAGC TERM 1412 990849 - 990885 + T 100 -11.8 -4.66833 | opp_overlap 990849 990846 990844 TAAAACAAAAGAGAA GTAGAGTTTAAGTTCG TCAGT TGAACATAAACTCTAC TTTTTAGGCTTAAGC Dhaf_0900 991835 - 990924 - | Xylose isomerase domain protein TIM barrel TERM 1413 992799 - 992779 - g 81 -9.8 -4.10188 | TACACCGATAAAGAA GGCTATGT GCATA ACATAGCC GAAGGACGCCAGTTG Dhaf_0901 992173 - 993069 + | Citrate (pro-3S)-lyase TERM 1414 994344 - 994311 - g 76 -11.1 -3.17075 | opp_overlap 994306 994306, overlap 994279 TTGCTCTGAATTTAA CCAGCTTACTTGCCC AAGA GGGCAAATAAGATAG GTACAATTCCTCCTA Dhaf_0902 993104 - 994339 + | Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) TERM 1415 994384 - 994395 + T 75 -5.8 -4.58085 | opp_overlap 994377 994374 994369, overlap 994374 GCAAAGAAGCAGCCT CAGC CATG GCTG TTTCTTTGTCGATCT TERM 1416 994529 - 994576 + T 100 -20.1 -3.75153 | opp_overlap 994529 AAGATGAGGCAAAAA GGGAGCTGTTGCACTGTGAAC AAAATA GTTCGCAATGTAACAGCTCCC TTTAAATTGAGAGAA TERM 1417 994576 - 994529 - T 100 -17.9 -4.70266 | opp_overlap 994529 AAGATGAGGCAAAAA GGGAGCTGTTGCACTGTGAAC AAAATA GTTCGCAATGTAACAGCTCCC TTTAAATTGAGAGAA Dhaf_0903 996120 - 994753 - | Citrate (Si)-synthase TERM 1418 995378 - 995363 - G 71 -4.7 -4.65078 | overlap 995365 ACATGGGTAACAAAA GAGGA GTTATT TCCTC CGCCATGTTCCGCAT TERM 1419 997188 - 997175 - g 90 -3.1 -5.85244 | AAGCAAAAGAAAAAA CAAGA AAGG TCCTG CCCTGTAGAGGACGT Dhaf_0904 996473 - 997876 + | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 1420 997914 - 997950 + T 100 -14.3 -3.79787 | opp_overlap 997908 GGAGATAGAGCGTAA GCGTCCTCACCCCGCCG TTA TGGCGAAGAGAGGACGC TTTGAATTAGTATCG Dhaf_0905 998178 - 997975 - | hypothetical protein Dhaf_0906 999628 - 998258 - | cobalamin B12-binding domain protein Dhaf_0907 1000264 - 999656 - | transcriptional regulator, TetR family TERM 1421 1000551 - 1000534 - R 100 -14.1 -5.37593 | opp_overlap 1000534 TCGTAAATGAAAAAA CGCGGCC ATCG GGCCGCG TTTGGTTTGACAGAA TERM 1422 1000534 - 1000551 + r 100 -14.1 -4.05788 | opp_overlap 1000534 TCGTAAATGAAAAAA CGCGGCC ATCG GGCCGCG TTTGGTTTGACAGAA Dhaf_0908 1000959 - 1000600 - | hypothetical protein TERM 1423 1000755 - 1000780 + g 93 -13.9 -3.34856 | overlap 1000750 TGATTTTAGCCCCTG CGCCGGCGCCG CTGC CGGTGCCGTCG TTGCCTTTCTCATCT Dhaf_0909 1001671 - 1000949 - | hypothetical protein TERM 1424 1001327 - 1001315 - G 77 -6.3 -4.56597 | opp_overlap 1001314 1001315 1001325, overlap 1001325 GTCCGGCTTTAAAAA TTCCT TAA AGGAA GATTTCTTCTTTTCT TERM 1425 1001325 - 1001336 + g 74 -4.4 -4.98061 | opp_overlap 1001315 1001325, overlap 1001315 1001314 AAAAATTCCTTAAAG GAAG ATTT CTTC TTTTCTTTGCTATGT Dhaf_0910 1002138 - 1001692 - | hypothetical protein Dhaf_0911 1002708 - 1002139 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 1426 1002430 - 1002442 + g 74 -4.1 -4.96848 | ATTGGTTTGATTTAA GGATA GGA TGTCC TTTTTATCTCGGAGA TERM 1427 1002648 - 1002658 + g 100 -5.4 -5.8096 | GATCGTAGAGAAGCT CCAA CCC TTGG TTTTTATTTTTTCTA Dhaf_0912 1002879 - 1003442 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 1428 1004782 - 1004762 - g 78 -6.1 -4.66833 | opp_overlap 1004765 CGCCAAGGTGAAAAA GGTTGGATA CTA TACCCATCC TATGAAGCTTAATGA Dhaf_0913 1003443 - 1004831 + | hypothetical protein TERM 1429 1004852 - 1004873 + F 100 -12.3 -4.5954 | AAGCTGTTTTGGGGA TGGCCGGAC TAGG GTTCGGCCA TTTTCTGTACTCTGG TERM 1430 1005262 - 1005283 + G 72 -5.8 -4.37092 | overlap 1005263 TGCCCATAGTAGGTG CCCACTCC ATTACC GGAGTGGC TTTTCTAGCCACGGT Dhaf_0914 1005015 - 1006202 + | benzoate transporter Dhaf_0915 1006816 - 1007400 + | Accessory gene regulator B TERM 1431 1007543 - 1007562 + F 88 -10 -4.16842 | opp_overlap 1007543, overlap 1007532 AGTTCCACTTAAGAA GCTGGGTT TTAT AACCCGGC TTTCTTAAGAGTGGG TERM 1432 1007562 - 1007543 - f 70 -7.8 -3.67775 | opp_overlap 1007532 1007543 AGTTCCACTTAAGAA GCTGGGTT TTAT AACCCGGC TTTCTTAAGAGTGGG TERM 1433 1007626 - 1007609 - g 80 -4.9 -5.00884 | opp_overlap 1007609 AGTTTTTCTAAAAAA GTCAATT ATTC AATCGAC CTTATTCAGCATAAC Dhaf_0916 1007586 - 1009385 + | signal transduction histidine kinase, nitrogen specific, NtrB Dhaf_0917 1009459 - 1010541 + | quinolinate synthetase complex, A subunit TERM 1434 1010565 - 1010586 + F 89 -7.3 -5.07486 | opp_overlap 1010569 CCTCTATGGAGTCAG GGAAGAGCT TTCG GGCTCTTTC TTTTTATTCAGAATA Dhaf_0918 1010687 - 1011283 + | transcriptional regulator, Fis family TERM 1435 1011440 - 1011466 + G 72 -10.9 -2.69151 | gap 1, opp_overlap 1011429, overlap 1011438 ATTAGCCAGGTTATG CTGGGC-AAGGC GGAA GCCTTTGCCCGG TCATATCTGCCGGAA Dhaf_0919 1011317 - 1011571 + | 3-hydroxyacyl-CoA dehydrogenase-like protein Dhaf_0920 1011564 - 1012865 + | protein of unknown function DUF362 TERM 1436 1012885 - 1012874 - f 72 -7.2 -3.91549 | AGAATAAGAAGATAA GGGC TTAA GCCC GGAAGGGGTAAGACA Dhaf_0921 1012901 - 1013515 + | nitroreductase TERM 1437 1013682 - 1013640 - f 72 -7.1 -3.98816 | gap 1, opp_overlap 1013641, overlap 1013633 1013641 TAAATGAAGAGCAAA GGCGCTCATAAGGAATGTAC AAGG GTACATTTCTTAGG-GCGCT TTTTTTATTTGCTGT TERM 1438 1013641 - 1013681 + F 100 -15 -5.99154 | gap 1, opp_overlap 1013633 1013640 1013641 AAATGAAGAGCAAAG GCGCTCATAAGGAATGTAC AAGG GTACATTTCTTA-GGGCGC TTTTTTTATTTGCTG TERM 1439 1013681 - 1013641 - f 76 -10.6 -2.98205 | gap 1, opp_overlap 1013641, overlap 1013633 1013640 AAATGAAGAGCAAAG GCGCTCATAAGGAATGTAC AAGG GTACATTTCTTAGG-GCGC TTTTTTTATTTGCTG TERM 1440 1013829 - 1013802 - g 74 -2.6 -5.07107 | opp_overlap 1013822, overlap 1013804 1013814 CAAATCTTTAAAAAA CACCATTGACAA TGGA CTGCCACTGGAG CCCAGCGTTGCTGAA TERM 1441 1013816 - 1013804 - g 71 -6.3 -4.15235 | overlap 1013802 1013814 AATCTTTAAAAAACA CCATT GAC AATGG ACTGCCACTGGAGCC Dhaf_0922 1013719 - 1015806 + | glutamine synthetase catalytic region TERM 1442 1015866 - 1015907 + T 100 -13.9 -4.27316 | opp_overlap 1015869, overlap 1015869 TGGAAGAAGCATGGA AAAGGCCACTGATACATCT TTGT GGATGTATTGGTGGCCTTC TTTTCGATTGCGAAG TERM 1443 1015869 - 1015904 + T 100 -15.6 -4.25859 | opp_overlap 1015869, overlap 1015866 AAGAAGCATGGAAAA GGCCACTGATACATCT TTGT GGATGTATTGGTGGCC TTCTTTTCGATTGCG TERM 1444 1015904 - 1015869 - T 100 -10.5 -4.25566 | opp_overlap 1015869 1015866 AAGAAGCATGGAAAA GGCCACTGATACATC TTTGTG GATGTATTGGTGGCC TTCTTTTCGATTGCG Dhaf_0923 1017155 - 1016010 - | YibE/F family protein Dhaf_0924 1018879 - 1017296 - | Alkaline phosphatase TERM 1445 1017527 - 1017551 + g 75 -3.5 -5.16572 | overlap 1017527 GCTGTCGGTAGGTTT GTCTTTCATGG TTT CCATAAAGGCC TTTTTTAGCTTAGCT Dhaf_0925 1019130 - 1019498 + | transcriptional regulator, ArsR family Dhaf_0926 1019622 - 1019774 + | heavy metal translocating P-type ATPase Dhaf_0927 1019918 - 1022320 + | heavy metal translocating P-type ATPase Dhaf_0928 1022401 - 1022778 + | transcriptional regulator, ArsR family TERM 1446 1022789 - 1022821 + F 100 -11.3 -5.63517 | opp_overlap 1022789 AATGAAATAGACAAA GGCGTACTCTCTC ATTAGTG GAGCGGGTACGCC TTTTTTATTTGAAAC TERM 1447 1022821 - 1022789 - f 86 -9.1 -4.30396 | opp_overlap 1022789 AATGAAATAGACAAA GGCGTACTCTCTC ATTAGTG GAGCGGGTACGCC TTTTTTATTTGAAAC TERM 1448 1022975 - 1022965 - f 86 -6.8 -5.04601 | TTGACAAATTAAAAA GGAG TAC CTCC CCAACATCTCGAAAT Dhaf_0929 1023041 - 1024399 + | transposase IS1182 family protein Dhaf_0930 1024568 - 1024951 + | hypothetical protein Dhaf_0931 1024964 - 1026175 + | GCN5-related N-acetyltransferase Dhaf_0932 1026229 - 1026597 + | hypothetical protein TERM 1449 1027230 - 1027242 + G 78 -5.5 -4.96501 | CCCTATATGACCCTG CCGGA TAT TCTGG TTTCTTTTTATAAGC TERM 1450 1027756 - 1027721 - g 75 -7.7 -4.20531 | gap 1, opp_overlap 1027730 1027732 TATAGCCATCGAAAA GCACAATAACATCACC ATTGG GGTGGTGT-ATCGTGC AGTCAATTCCCAAAC Dhaf_0933 1026915 - 1027832 + | transcriptional regulator, LysR family Dhaf_0934 1027967 - 1027839 - | hypothetical protein TERM 1451 1027866 - 1027886 + g 100 -15.5 -5.75822 | ATGGAAACCTATTTC CTCCGAGAG ATG CTCTCGGAG TTTTTTTAGTTTATA TERM 1452 1028302 - 1028284 - g 70 -8 -3.81929 | overlap 1028275 1028285 GAAGAACCGATCAAA CGGGGCCC TCT GGGGCCCA ACATCATCGAACAAA Dhaf_0935 1028038 - 1029255 + | Mur ligase middle domain protein Dhaf_0936 1029236 - 1029691 + | hypothetical protein Dhaf_0937 1029707 - 1029841 + | hypothetical protein Dhaf_0938 1029859 - 1030695 + | protein of unknown function DUF867 TERM 1453 1030765 - 1030736 - T 100 -12.3 -5.48514 | gap 1, opp_overlap 1030736 AGGAATAAACAAAAA GCTGCAAACCGCCT AAA AAG-GGTTTGCAGC TTTCGTATTTAAGAG TERM 1454 1030736 - 1030765 + T 86 -10.1 -4.00532 | gap 1, opp_overlap 1030736 AGGAATAAACAAAAA GCTGCAAACCGCCT AAA AAG-GGTTTGCAGC TTTCGTATTTAAGAG Dhaf_0939 1031561 - 1030848 - | protein of unknown function DUF867 TERM 1455 1031833 - 1031796 - H 79 -7.8 -4.28361 | opp_overlap 1031802 1031803, overlap 1031801 1031803 GTAAGGGGACGAAAA GAAAAGAGCTGAGAAG TATCTG CTTCTCAGCATTTTCC GCTTCCGGCCGGAAG TERM 1456 1031828 - 1031801 - H 78 -4.1 -5.13722 | opp_overlap 1031802 1031803, overlap 1031796 1031803 GGGACGAAAAGAAAA GAGCTGAGAAG TATCTG CTTCTCAGCAT TTTCCGCTTCCGGCC TERM 1457 1031802 - 1031827 + H 79 -8.3 -4.19238 | opp_overlap 1031801 1031796 1031803, overlap 1031803 GGACGAAAAGAAAAG AGCTGAGAAGT ATCT GCTTCTCAGCA TTTTCCGCTTCCGGC TERM 1458 1031803 - 1031826 + H 86 -11.8 -3.11222 | opp_overlap 1031801 1031796 1031803, overlap 1031802 GACGAAAAGAAAAGA GCTGAGAAGT ATCT GCTTCTCAGC ATTTTCCGCTTCCGG TERM 1459 1031826 - 1031803 - H 93 -11.1 -4.18807 | opp_overlap 1031803 1031802, overlap 1031801 1031796 GACGAAAAGAAAAGA GCTGAGAAG TATCTG CTTCTCAGC ATTTTCCGCTTCCGG Dhaf_0940 1031928 - 1032641 + | two component transcriptional regulator, winged helix family Dhaf_0941 1032634 - 1034256 + | histidine kinase TERM 1460 1034933 - 1034949 + G 70 -7.9 -3.95424 | TTTTGACGGGTTTGG GGCTGGG CGG CCTGGCC TTTGCTCTTGCTGCT Dhaf_0942 1034407 - 1035540 + | MscS Mechanosensitive ion channel Dhaf_0943 1035869 - 1035567 - | branched-chain amino acid transport Dhaf_0944 1036573 - 1035866 - | AzlC family protein Dhaf_0945 1036743 - 1037297 + | transcriptional regulator, XRE family TERM 1461 1037445 - 1037395 - f 78 -9.1 -3.85891 | gap 1, opp_overlap 1037396, overlap 1037388 1037396 CAAAAATGGAGCAAA GGCGCTC-AAAGAGACATGTACCT GCAC AGGTGCAAGTCTTTTTGGAGCGCT TTTTTGGTTTATTTT TERM 1462 1037444 - 1037396 - f 93 -12.6 -2.9045 | gap 1, opp_overlap 1037396, overlap 1037388 1037395 AAAAATGGAGCAAAG GCGCTC-AAAGAGACATGTACCT GCAC AGGTGCAAGTCTTTTTGGAGCGC TTTTTTGGTTTATTT TERM 1463 1037396 - 1037444 + F 100 -17 -5.48163 | gap 1, opp_overlap 1037388 1037396 1037395 AAAAATGGAGCAAAG GCGCT-CAAAGAGACATGTACCT GCAC AGGTGCAAGTCTTTTTGGAGCGC TTTTTTGGTTTATTT TERM 1464 1038142 - 1038163 + G 71 -3 -4.99638 | gap 1, overlap 1038146 TTTATAAAGGGATGC TGACGGCGG AGCAG CTG-CGTCA TTTTTATCTGGATCT TERM 1465 1040451 - 1040437 - g 70 -10 -3.20841 | overlap 1040435 AGATTCAGATCAAGA TGGCTC AGG GAGCCA AGCCCGGCGAAGGGG TERM 1466 1041575 - 1041592 + G 71 -4 -4.71426 | overlap 1041576 TAAAATCGCCGTGTA CCCGCC CCGGAC GGCGGA TTTTGTTCCTGAAGA Dhaf_0946 1037520 - 1042139 + | Glutamate synthase (ferredoxin) TERM 1467 1043313 - 1043297 - g 70 -2.2 -4.89233 | overlap 1043299 TATCAATACGAAAAA GATCGT GGGCA ACGAGC AAGGTGAGGTTAAGG Dhaf_0947 1042152 - 1043669 + | glutamate synthase, NADH/NADPH, small subunit TERM 1468 1043717 - 1043765 + F 100 -20 -4.28369 | gap 1, opp_overlap 1043721, overlap 1043721 AAATGTGGAGTAAAT TAAAGGGACGATTCATTGGACAG GGTG CTGTC-GATGAATCGTCCCTTTG TTATTTTGGATTATT TERM 1469 1043721 - 1043761 + F 100 -18.6 -4.68601 | gap 1, opp_overlap 1043721, overlap 1043717 GTGGAGTAAATTAAA GGGACGATTCATTGGACAG GGTG CTGTC-GATGAATCGTCCC TTTGTTATTTTGGAT TERM 1470 1043761 - 1043721 - f 100 -16.4 -4.10552 | gap 1, opp_overlap 1043721 1043717 GTGGAGTAAATTAAA GGGACGATTCATTGGACAG GGTG CTGTCGA-TGAATCGTCCC TTTGTTATTTTGGAT TERM 1471 1044234 - 1044223 - f 70 -5.8 -4.3255 | TCGGGAATTAAGAAA GACC TATC GGTC CAATTGCATTGATGT Dhaf_0948 1044306 - 1045052 + | hypothetical protein TERM 1472 1045565 - 1045579 + F 73 -5.6 -4.48072 | overlap 1045566 TCAGCGGCTCTGTCA CCCGGA TTC TCCGGA TTTTATACTCAATAT TERM 1473 1045566 - 1045578 + F 71 -9.1 -3.2812 | overlap 1045565 CAGCGGCTCTGTCAC CCGGA TTC TCCGG ATTTTATACTCAATA Dhaf_0950 1045723 - 1046439 + | hypothetical protein TERM 1474 1046713 - 1046675 - f 100 -17.6 -2.80816 | GGTTCAGGCACCACA TCCTCCCGCCTAAGATAA GAG CTATCTAAGGCGGGAGAA CGTCGGGAATTCACA Dhaf_0951 1046805 - 1047002 + | hypothetical protein Dhaf_0952 1047543 - 1047680 + | hypothetical protein Dhaf_0953 1049089 - 1047909 - | transposase IS3/IS911 family protein TERM 1475 1048751 - 1048769 + g 80 -4.4 -5.20216 | overlap 1048749 1048752 ACATCTTCTCAACCG GGCAGCTG GAG CTGCTGGC TTTTTTAATCATCTG Dhaf_0955 1049123 - 1049521 + | hypothetical protein Dhaf_0956 1049631 - 1050413 + | 3''-adenylyltransferase Dhaf_0957 1050473 - 1050859 + | hypothetical protein Dhaf_0958 1050969 - 1051409 + | hypothetical protein Dhaf_0959 1051560 - 1052021 + | GCN5-related N-acetyltransferase Dhaf_0960 1052209 - 1052640 + | GCN5-related N-acetyltransferase TERM 1476 1052649 - 1052628 - f 71 -4.5 -4.58283 | opp_overlap 1052631, overlap 1052631 TAAGGGGTTTAAAAA GAAGCTAAA ATAG TTTAGCTTA TTGACATATATAGAT TERM 1477 1052646 - 1052631 - f 72 -6.2 -4.40561 | opp_overlap 1052631, overlap 1052628 GGGGTTTAAAAAGAA GCTAAA ATAG TTTAGC TTATTGACATATATA TERM 1478 1052921 - 1052898 - g 71 -4.6 -4.54306 | TGGAACAAAAAAATA TGCTCATTTC TTAC GAAAAAAGCA CGACTAATCTGAGGG Dhaf_0961 1052717 - 1053064 + | transcriptional regulator, PadR-like family TERM 1479 1053165 - 1053146 - g 74 -6.4 -4.38313 | opp_overlap 1053145 AGAGGAAATCGAAAA CCATTTGG CTGA CCAAAAGG ATGCTTTTCAAAGAG TERM 1480 1054152 - 1054141 - g 79 -2.2 -5.47431 | gap 1, overlap 1054142 GTAAGAGACAAAAAA GTGCC CTT GGC-C AACTTGTTTCGTTAG Dhaf_0962 1053048 - 1054415 + | cell division membrane protein-like protein TERM 1481 1055396 - 1055412 + G 73 -5.1 -4.61199 | opp_overlap 1055383 ATCAAGGGTGTAGGC CTTGTCA CCG TGGCAGG TTTTCTCTCTGAAGT TERM 1482 1055492 - 1055471 - g 100 -10.1 -4.83759 | AAGCAAATCCAAAAA CTCGCAGGG TTGG CCTTGCGAG AGAGTAGCTCAGGTA Dhaf_0963 1054508 - 1055791 + | transposase IS116/IS110/IS902 family protein TERM 1483 1055851 - 1055822 - f 73 -2.9 -5.22137 | gap 1, overlap 1055824 1055825 AACCATAAAAGAAAA CAGT-CTGTGGTTA GCG TCACCACAGAAGTG AACAATCCAGGTAAC TERM 1484 1055847 - 1055825 - f 72 -9.2 -3.11164 | overlap 1055824 1055822 CATAAAAGAAAACAG TCTGTGGTTA GCG TCACCACAGA AGTGAACAATCCAGG Dhaf_0964 1056650 - 1057339 + | hypothetical protein TERM 1485 1057488 - 1057478 - f 89 -6.8 -5.32944 | TTGACAACTAAAAAA GGAG TAC CTCC CCAACATCTCGAAAT TERM 1486 1057536 - 1057525 - f 73 -5.8 -4.45168 | CGTCCAAAACACAAA CACC GAGA GGTG GGAAAGGAGTACTCC TERM 1487 1057583 - 1057597 + G 71 -7.2 -4.12198 | overlap 1057586 GCCAAGAACGTCTAT TTTCCT TGG AGGAAA TTTTAGAAACTTCTC Dhaf_0965 1057555 - 1058913 + | transposase IS1182 family protein TERM 1488 1058936 - 1058926 - f 86 -6.8 -5.0133 | opp_overlap 1058926 TAGTTTTTTAAAAAA CGGA AAT TCCG AAATTCTGTTAGTCT Dhaf_0966 1059101 - 1059934 + | transcriptional regulator, XRE family Dhaf_0967 1059951 - 1060421 + | hypothetical protein Dhaf_0968 1060474 - 1060803 + | GCN5-related N-acetyltransferase Dhaf_0969 1060953 - 1061405 + | GCN5-related N-acetyltransferase Dhaf_0970 1061433 - 1061816 + | hypothetical protein Dhaf_0971 1063575 - 1061824 - | DNA-directed DNA polymerase TERM 1489 1062085 - 1062099 + g 83 -7 -4.77036 | opp_overlap 1062085, overlap 1062086 AGGTGTATTATAGTA TCCGGG CAA CCCGGC TTTTTCATAATAGAC TERM 1490 1062086 - 1062098 + g 77 -10.5 -3.4574 | opp_overlap 1062085, overlap 1062085 GGTGTATTATAGTAT CCGGG CAA CCCGG CTTTTTCATAATAGA TERM 1491 1063227 - 1063209 - G 72 -10.2 -3.08966 | overlap 1063211 TCAAATTGGACTGAA CAGGGCCC CCT GAGCCCCG CAGAAGCTGGGAGGC Dhaf_0973 1064260 - 1064616 + | Cupin 2 conserved barrel domain protein TERM 1492 1064656 - 1064626 - f 100 -12.6 -5.55695 | opp_overlap 1064629, overlap 1064629 GAATAATATAAAAAA GAACCCGGTGCG GCAGTTG CGCACCGGGTTT TGTATGAGGAGCGGG TERM 1493 1064629 - 1064653 + F 100 -14.3 -4.52589 | opp_overlap 1064629 1064626 TAATATAAAAAAGAA CCCGGTGCG GCAGTTG CGCACCGGG TTTTGTATGAGGAGC TERM 1494 1064653 - 1064629 - f 100 -14.3 -4.80737 | opp_overlap 1064629, overlap 1064626 TAATATAAAAAAGAA CCCGGTGCG GCAGTTG CGCACCGGG TTTTGTATGAGGAGC Dhaf_0974 1064761 - 1065171 + | GCN5-related N-acetyltransferase Dhaf_0975 1065448 - 1066068 + | hypothetical protein Dhaf_0976 1066185 - 1066760 + | hypothetical protein TERM 1495 1066832 - 1066815 - f 73 -8.5 -3.65313 | opp_overlap 1066815 CAAGTATAGGTCAAA TTCCCAA ACGT TTGGGAA TTTTGTTTTTTAGCC TERM 1496 1066815 - 1066832 + F 100 -8.5 -5.42198 | opp_overlap 1066815 CAAGTATAGGTCAAA TTCCCAA ACGT TTGGGAA TTTTGTTTTTTAGCC TERM 1497 1067020 - 1066984 - g 100 -8.8 -5.64421 | gap 1, opp_overlap 1066988 1066989, overlap 1066986 1066987 1066988 1066994 ATGCTAAAGAAAAAA CAGGTCTAAAGGCGGGA AGTA TCCCGCCTTTAG-CTTT CTATCCGGTGGTGTT TERM 1498 1067018 - 1066986 - g 93 -11.4 -4.45696 | gap 1, opp_overlap 1066988 1066989, overlap 1066984 1066987 1066988 1066994 GCTAAAGAAAAAACA GGTCTAAAGGCGGGA AGTA TCCCGCCTTTAG-CT TTCTATCCGGTGGTG TERM 1499 1067017 - 1066987 - g 91 -14.9 -3.25791 | gap 1, opp_overlap 1066988 1066989, overlap 1066986 1066984 1066988 1066994 CTAAAGAAAAAACAG GTCTAAAGGCGGGA AGTA TCCCGCCTTTAG-C TTTCTATCCGGTGGT TERM 1500 1066988 - 1067017 + G 100 -15.1 -4.053 | opp_overlap 1066987 1066986 1066984 1066988 1066994, overlap 1066989 TAAAGAAAAAACAGG TCTAAAGGCGGGA AGTA TCCCGCCTTTAGC TTTCTATCCGGTGGT TERM 1501 1067017 - 1066988 - g 95 -15.1 -2.53848 | opp_overlap 1066988 1066989, overlap 1066987 1066986 1066984 1066994 TAAAGAAAAAACAGG TCTAAAGGCGGGA AGTA TCCCGCCTTTAGC TTTCTATCCGGTGGT TERM 1502 1066989 - 1067016 + G 100 -18.6 -3.02698 | opp_overlap 1066987 1066988 1066986 1066984 1066994, overlap 1066988 AAAGAAAAAACAGGT CTAAAGGCGGGA AGTA TCCCGCCTTTAG CTTTCTATCCGGTGG TERM 1503 1067011 - 1066994 - g 90 -12.7 -3.64192 | opp_overlap 1066989 1066988, overlap 1066987 1066988 1066986 1066984 AAAAACAGGTCTAAA GGCGGGA AGTA TCCCGCC TTTAGCTTTCTATCC Dhaf_0977 1066896 - 1067081 + | hypothetical protein TERM 1504 1067130 - 1067140 + T 86 -6.8 -5.0133 | opp_overlap 1067122 AGACTAACAGAATTT CGGA ATT TCCG TTTTTTAAAAAACTA Dhaf_0978 1068511 - 1067153 - | transposase IS1182 family protein TERM 1505 1068483 - 1068469 - G 71 -7.2 -4.12198 | overlap 1068448 GAGAAGTTTCTAAAA TTTCCT CCA AGGAAA ATAGACGTTCTTGGC TERM 1506 1068530 - 1068541 + H 73 -5.8 -4.45168 | GGAGTACTCCTTTCC CACC TCTC GGTG TTTGTGTTTTGGACG TERM 1507 1068578 - 1068588 + H 89 -6.8 -5.32944 | ATTTCGAGATGTTGG GGAG GTA CTCC TTTTTTAGTTGTCAA TERM 1508 1069125 - 1069152 + G 70 -10 -3.14211 | gap 1, opp_overlap 1069128 1069132, overlap 1069128 1069132 TATCCGGCTATCGAC GA-ACCAATGGCC GGC GGCTATTGGTCTC TTGATGGCAAGACAT TERM 1509 1069148 - 1069128 - g 70 -9.7 -3.18264 | opp_overlap 1069125 1069128 1069132, overlap 1069132 CCGGCTATCGACGAA CCAATGGCC GGC GGCTATTGG TCTCTTGATGGCAAG TERM 1510 1069128 - 1069148 + G 79 -11.9 -3.12895 | opp_overlap 1069128 1069132, overlap 1069125 1069132 CCGGCTATCGACGAA CCAATGGCC GGC GGCTATTGG TCTCTTGATGGCAAG Dhaf_0979 1068714 - 1069235 + | hypothetical protein TERM 1511 1069473 - 1069483 + G 83 -4.6 -5.34365 | TTTTGTTGGGATGAT CGGT GGG GCCG TTTTTGTTATTATCG Dhaf_0980 1069420 - 1069767 + | hypothetical protein Dhaf_0981 1069887 - 1070552 + | Methyltransferase type 11 Dhaf_0982 1070630 - 1070791 + | hypothetical protein TERM 1512 1071455 - 1071486 + G 77 -6.6 -4.48987 | overlap 1071482 TGAAGTTCTGATTGC GCTACTGTTTGGTT TCAG AGCCAAAAAGCAGC TTTTGCTTATAGGAA Dhaf_0983 1070874 - 1071770 + | hypothetical protein Dhaf_0984 1071849 - 1072256 + | molybdopterin converting factor, subunit 2 TERM 1513 1072557 - 1072535 - g 71 -10.6 -2.81289 | overlap 1072534 1072532 GGAAGGGGAAAACAT GCTTTTGTGG TGG CCACAAGAGC CGGGAGTAGAATCGC TERM 1514 1072984 - 1072959 - g 74 -3.9 -4.87786 | opp_overlap 1072959 1072980 TTAAGGCTATAAAAA TGGTGGGGAAT AACA AACCCCGACCA TATTGGACATTTGCT Dhaf_0985 1072277 - 1073347 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_0986 1073362 - 1074015 + | hypothetical protein Dhaf_0987 1074029 - 1074394 + | hypothetical protein TERM 1515 1074918 - 1074908 - g 71 -2.6 -4.83615 | CAGGTGCGATAAAAA TTTA CGA TAAA GACGGTAGCGTGTTG Dhaf_0988 1074436 - 1074957 + | hypothetical protein Dhaf_0989 1075019 - 1075522 + | hypothetical protein TERM 1516 1075594 - 1075574 - f 70 -5.5 -4.43477 | opp_overlap 1075574 GTGAGGGAATGAAAA GAAGGATAA TCC TTATACTTC TCATACTAATAGTGG Dhaf_0990 1075696 - 1076217 + | NUDIX hydrolase Dhaf_0991 1076228 - 1076794 + | hypothetical protein TERM 1517 1076821 - 1076857 + F 78 -10.1 -3.45571 | opp_overlap 1076824, overlap 1076814 GCGGAGGGGCTTAGA GGACGCTTTATGAGCAC AAT GTGCTTAAGAGGCGCCC TTCATCTTTGGGGAC TERM 1518 1077096 - 1077112 + G 73 -2.1 -5.01042 | overlap 1077098 CTATTAACCTGCAGT CGCCCGG TTT CTGGGTA TTTTTGATTTACGTT Dhaf_0992 1076999 - 1078600 + | hypothetical protein TERM 1519 1078714 - 1078675 - T 100 -16.5 -4.84529 | opp_overlap 1078676, overlap 1078676 GGATAAAGCCAAAAA GGAGTATCGCCCTGCTC GATCAT GAGCAGGGCGATGCTCT TTTTTATGCCTTGCC TERM 1520 1078676 - 1078713 + T 100 -22.9 -5.31456 | opp_overlap 1078675 1078676 GATAAAGCCAAAAAG GAGTATCGCCCTGCTCG ATCA TGAGCAGGGCGATGCTC TTTTTTATGCCTTGC TERM 1521 1078713 - 1078676 - T 100 -20 -3.49633 | opp_overlap 1078676, overlap 1078675 GATAAAGCCAAAAAG GAGTATCGCCCTGCTC GATCAT GAGCAGGGCGATGCTC TTTTTTATGCCTTGC Dhaf_0993 1080610 - 1078757 - | asparagine synthase (glutamine-hydrolyzing) TERM 1522 1079439 - 1079423 - G 78 -7.9 -4.46212 | overlap 1079424 TTCCGGACGATAAAA CCAGGGG TAG CCCCCGA AGACTTCATCAGAGC TERM 1523 1080409 - 1080433 + g 85 -7.7 -4.71061 | AGTCGTATCCCTGAT GGGTGGCGGTC ATG GGCTGCCGGCC TTTTTCAATATCGAT TERM 1524 1080670 - 1080635 - H 100 -11.3 -5.27335 | opp_overlap 1080638 1080642, overlap 1080636 CCTCGCAAACAAAAA TGACAAAGGAGTACC TGGCCG AGTACTCCTTTGTCT CTGAATTAATATATG TERM 1525 1080669 - 1080636 - H 100 -14.8 -3.75678 | opp_overlap 1080638 1080642, overlap 1080635 CTCGCAAACAAAAAT GACAAAGGAGTACC TGGCCG AGTACTCCTTTGTC TCTGAATTAATATAT TERM 1526 1080638 - 1080667 + H 79 -10.9 -2.96152 | opp_overlap 1080636 1080635, overlap 1080642 CGCAAACAAAAATGA CAAAGGAGTAC CTGGCCGA GTACTCCTTTG TCTCTGAATTAATAT TERM 1527 1080873 - 1080911 + H 100 -10.2 -4.95155 | opp_overlap 1080874, overlap 1080874 TTAGGTATAGAACAA AGGCGTTCTAAGGACCCT AAT AGGGATCTTAGTGCGCCC TTTTTGTACTATCAG TERM 1528 1080874 - 1080910 + H 100 -13.7 -3.5637 | opp_overlap 1080874, overlap 1080873 TAGGTATAGAACAAA GGCGTTCTAAGGACCCT AAT AGGGATCTTAGTGCGCC CTTTTTGTACTATCA TERM 1529 1080910 - 1080874 - H 88 -9.3 -4.39998 | opp_overlap 1080874 1080873 TAGGTATAGAACAAA GGCGTTCTAAGGACCCT AAT AGGGATCTTAGTGCGCC CTTTTTGTACTATCA Dhaf_0994 1080978 - 1082306 + | glutamine synthetase, type I Dhaf_0995 1082339 - 1082911 + | response regulator receiver and ANTAR domain protein TERM 1530 1082914 - 1082946 + T 100 -10.6 -4.40804 | opp_overlap 1082914 CGAGCATGCTTAAAA GGAGAAACCCGCGT CATCA ACGATGGTTTCTCC TTTTATACCGTAATC TERM 1531 1082946 - 1082914 - T 100 -11.3 -4.12188 | opp_overlap 1082914 CGAGCATGCTTAAAA GGAGAAACCCGCGTC ATC AACGATGGTTTCTCC TTTTATACCGTAATC Dhaf_0996 1084355 - 1082991 - | hydrogenase large subunit domain protein TERM 1532 1084580 - 1084522 - R 72 -6.2 -4.34402 | gap 3, overlap 1084523 TCCCTCATAGCAAAA GGGTTTGGCCTAAATGCTCC--CCCTCCC TTTA GGGAAAGTCGGATCATCTGGGCCAAACC- CTTGACATTCTGGAT TERM 1533 1084580 - 1084523 - R 86 -12.2 -3.2032 | gap 2, overlap 1084522 CCCTCATAGCAAAAG GGTTTGGCCTAAATGCTCC--CCCTCCC TTTA GGGAAAGTCGGATCATCTGGGCCAAACC CTTGACATTCTGGAT Dhaf_0997 1084963 - 1084628 - | hypothetical protein TERM 1534 1085033 - 1085063 + r 93 -12.7 -3.16177 | opp_overlap 1085047 CGGAGATTCATCCGC CCCCTGCTTCAAA TCGGC TTTAAAGCAGGGG TTAGCTATATAAAAT Dhaf_0998 1085723 - 1085175 - | BioY protein TERM 1535 1085223 - 1085237 + g 71 -8.5 -3.74693 | CTGGTTACCCACCCA GGCGG CTATT CCGCC TTTGATCAAATCGCC TERM 1536 1085350 - 1085338 - G 75 -3.3 -5.01497 | ATGACCAGATAAAAA TAGGC TAA GCCGA TCAGATATAAGACGA TERM 1537 1086839 - 1086852 + G 80 -6.7 -4.71482 | TCGGGCTCATTCATC CTTCC CGGG GGAAG TTTTTGGCCTTTGGT Dhaf_0999 1085896 - 1087383 + | ABC transporter related TERM 1538 1087508 - 1087518 + G 70 -2.4 -4.94902 | AGGGTTGCTCTGCCT GACC GGG GGGC TTTTTATCATGCTTG Dhaf_1000 1087377 - 1088159 + | cobalt transport protein Dhaf_1001 1088333 - 1089100 + | hypothetical protein TERM 1539 1089326 - 1089336 + G 71 -4 -4.82855 | overlap 1089323 GAGGGAAAAACCGGG GAAA GTA TTTC TTTTTCCCTTTGATG Dhaf_1002 1089129 - 1089716 + | protein of unknown function DUF820 TERM 1540 1089841 - 1089819 - T 100 -9.2 -4.65895 | opp_overlap 1089801 1089819 TCTTTCAGTGAAAAA GGACTGTC TGGTCAG GACAGTCC TTTTGGGCTAAAGAT TERM 1541 1089819 - 1089841 + T 88 -9.9 -4.13945 | opp_overlap 1089819, overlap 1089801 TCTTTCAGTGAAAAA GGACTGTCT GGTCA GGACAGTCC TTTTGGGCTAAAGAT Dhaf_1003 1091140 - 1089893 - | threonine dehydratase TERM 1542 1089999 - 1090024 + g 81 -3.2 -5.52807 | overlap 1090000 TCTTCTTTACGGGAG AGCTCGATAC CAATCA GTGTCGGGCC TTTTTCTTTGTTGTT TERM 1543 1090896 - 1090863 - G 72 -10.3 -3.01791 | opp_overlap 1090861 1090858, overlap 1090891 ATGCTTCCTTTAATA CCCAGGGCTTTGC AGGAATAA GCAACACCCTGGG CATGATTACCTGCAC Dhaf_1004 1091530 - 1091853 + | hypothetical protein TERM 1544 1092453 - 1092467 + G 71 -2.8 -5.00339 | opp_overlap 1092455, overlap 1092455 CTTTCCCCTACAGAG TATGAG TTG CTCAAA TTTTTAATTCTTAAT Dhaf_1005 1091976 - 1092659 + | two component transcriptional regulator, winged helix family Dhaf_1006 1092656 - 1094167 + | histidine kinase TERM 1545 1094284 - 1094264 - f 74 -9.7 -3.10134 | opp_overlap 1094264, overlap 1094263 AAATTACGCGAAAAG TGTCGTGAC TAT GTCACGGCA TTTTTTTGCGTATCA TERM 1546 1094264 - 1094284 + F 100 -11.9 -5.50499 | opp_overlap 1094264 1094263 AAATTACGCGAAAAG TGTCGTGAC TAT GTCACGGCA TTTTTTTGCGTATCA Dhaf_1007 1094502 - 1095839 + | Collagen triple helix repeat protein TERM 1547 1095944 - 1095973 + F 100 -10.2 -5.13722 | gap 1 CTGATTTTCTTAGTA CGAGAACAT-TCC CTTGC GGATATGTTCTCG TTTTATTTTCATGAG Dhaf_1008 1096123 - 1097265 + | Collagen triple helix repeat protein TERM 1548 1097293 - 1097320 + F 100 -14.2 -4.23674 | opp_overlap 1097295, overlap 1097295 GTTAAAATGCTCACA GAGTGCCGTGAC TCAT GTCACGGCACTG TTTCTATTGATAAGG TERM 1549 1097318 - 1097295 - f 100 -16.8 -2.91429 | opp_overlap 1097293 1097295 TAAAATGCTCACAGA GTGCCGTGAC TCAT GTCACGGCAC TGTTTCTATTGATAA TERM 1550 1097295 - 1097318 + F 100 -16.8 -3.71627 | opp_overlap 1097295, overlap 1097293 TAAAATGCTCACAGA GTGCCGTGAC TCAT GTCACGGCAC TGTTTCTATTGATAA TERM 1551 1097456 - 1097474 + G 85 -10.4 -4.04206 | CATTCAGGGAATCTT GGTCAAAA AGC TTTTGACC TTTCTCTGAAAATCA Dhaf_1009 1097369 - 1097773 + | Hemerythrin HHE cation binding domain protein TERM 1552 1097984 - 1097969 - g 73 -3.2 -4.98255 | opp_overlap 1097980 CGTCAATCAGAAAAA GCTGGA TGTT TTCAGC GCTCTGATTGCCTTC Dhaf_1010 1097901 - 1098152 + | hypothetical protein TERM 1553 1098210 - 1098175 - T 100 -16.4 -4.31688 | gap 1, opp_overlap 1098175 AATATTAATCTAAAA TTGCCTGGA-TCTTCGC TCA GCAAAGATTCCAGGCAA TTTTTTTAACTGATT TERM 1554 1098175 - 1098210 + T 100 -14.2 -5.49729 | gap 1, opp_overlap 1098175 AATATTAATCTAAAA TTGCCTGG-ATCTTCGC TCA GCAAAGATTCCAGGCAA TTTTTTTAACTGATT Dhaf_1011 1102571 - 1098228 - | DNA polymerase III, alpha subunit TERM 1555 1099482 - 1099496 + g 73 -7.1 -4.16842 | GCAGCCTTTGGAGAT GCGGA TGATT TCCGC TTTATTGGCAGTCCG TERM 1556 1100350 - 1100366 + g 71 -6.5 -4.30933 | opp_overlap 1100343 AGAAAATGCACATCC CCTGTGG CTA CGACAGG TTTGTTGAGTTTCTC TERM 1557 1103039 - 1103071 + H 100 -11.5 -6.17268 | opp_overlap 1103039 1103040, overlap 1103024 1103040 CGTAAGATGTTAAAA TCTTTCGTCTCTATA GGT TATAGAGATGGAAGG TTTTTTTTATTGTGA TERM 1558 1103040 - 1103070 + H 100 -12.8 -4.27921 | opp_overlap 1103039 1103040, overlap 1103024 1103039 GTAAGATGTTAAAAT CTTTCGTCTCTATA GGT TATAGAGATGGAAG GTTTTTTTTATTGTG Dhaf_1012 1103103 - 1104776 + | pyruvate carboxyltransferase Dhaf_1013 1104856 - 1105824 + | beta-lactamase domain protein TERM 1559 1105834 - 1105883 + T 85 -4.3 -5.54079 | gap 1, opp_overlap 1105839 AACTAAAAGATAAAA GCCAAGGTAACATTTCACCCTATA GCG TAAGCGGGGAAATGG-GCCTTGGC TTTTTTACTTTTTCA Dhaf_1014 1107825 - 1105888 - | sigma54 specific transcriptional regulator, Fis family TERM 1560 1107424 - 1107434 + g 81 -3.2 -5.37593 | CTCATAGCCGTCGGT TCTC ATG GGGA TTTTTTCCTTTAGGG TERM 1561 1107573 - 1107547 - G 70 -2.2 -4.91473 | opp_overlap 1107551, overlap 1107548 1107549 1107551 CAACTCAAAAACAAA CCCATCAGAATC GCA GATGCTGATGTT GCAATCCAGCAAAGT TERM 1562 1108069 - 1108038 - H 73 -8.8 -3.53343 | opp_overlap 1108038 1108039, overlap 1108039 1108047 AACCGGCTGCGTAAA GCGGAACAATTTGT TCAA ACAAAGTGTTCCGT CTTGTGAACAATGGA TERM 1563 1108068 - 1108039 - H 88 -12.3 -2.71791 | opp_overlap 1108038 1108039, overlap 1108038 1108047 ACCGGCTGCGTAAAG CGGAACAATTTGT TCAA ACAAAGTGTTCCG TCTTGTGAACAATGG TERM 1564 1108039 - 1108068 + H 93 -12.3 -3.21924 | opp_overlap 1108039 1108038 1108047, overlap 1108038 ACCGGCTGCGTAAAG CGGAACAATTTGT TCAA ACAAAGTGTTCCG TCTTGTGAACAATGG Dhaf_1015 1108136 - 1108282 + | hypothetical protein Dhaf_1016 1108287 - 1109054 + | Enoyl-CoA hydratase/isomerase TERM 1565 1109430 - 1109452 + G 73 -8.4 -3.83205 | gap 1, overlap 1109430 1109446 CCAGGGAATTGGTGT GG-CGGCCG TTCTCC CGGCCGGCC TTTCCTATGCCAGCT Dhaf_1017 1109086 - 1110663 + | major facilitator superfamily MFS_1 TERM 1566 1110728 - 1110693 - f 70 -7.6 -3.66803 | gap 1, opp_overlap 1110693 1110697 1110700, overlap 1110697 GTTCAAGAGCTTAAA GGGAGAAGCTGTGTGCC TTA AGC-CACAGCTTCTTGC TTGTTGTGAAAGTGT TERM 1567 1110693 - 1110728 + F 78 -9.1 -3.80174 | gap 1, opp_overlap 1110693 1110697, overlap 1110697 1110700 GTTCAAGAGCTTAAA GGGAGAAGCTGTGTGC CTTAA GC-CACAGCTTCTTGC TTGTTGTGAAAGTGT TERM 1568 1110724 - 1110697 - f 80 -11.4 -2.66098 | gap 1, opp_overlap 1110693 1110697 1110700, overlap 1110693 AAGAGCTTAAAGGGA GAAGCTGTGTGCC TTA AGC-CACAGCTTC TTGCTTGTTGTGAAA TERM 1569 1110697 - 1110724 + F 84 -10.7 -3.58208 | gap 1, opp_overlap 1110697 1110693, overlap 1110693 1110700 AAGAGCTTAAAGGGA GAAGCTGTGTGC CTTAA GC-CACAGCTTC TTGCTTGTTGTGAAA TERM 1570 1110994 - 1111013 + G 71 -7 -4.07687 | opp_overlap 1110991, overlap 1111010 AAGGTCATTACATCC GGGTCGGC AATT GCAGGCCC TTTTGCCGGGGCACT TERM 1571 1111669 - 1111657 - g 70 -7.7 -3.92143 | opp_overlap 1111656 GAAAACGTCCAGAAA TGCCA AGA TGGCA ATTACGTCATGCTGG TERM 1572 1112000 - 1111990 - g 71 -8.2 -3.78775 | GGCCGCAGGATCAAA GGGG TGG CCCC CATTCCCAGGTTCAG Dhaf_1018 1110934 - 1112148 + | L-carnitine dehydratase/bile acid-inducible protein F Dhaf_1019 1112199 - 1112969 + | Electron transfer flavoprotein alpha/beta-subunit Dhaf_1020 1112984 - 1113931 + | Electron transfer flavoprotein alpha subunit Dhaf_1021 1113986 - 1115137 + | acyl-CoA dehydrogenase domain protein TERM 1573 1115153 - 1115139 - f 75 -5.6 -4.59944 | opp_overlap 1115149, overlap 1115147 AGCACTATAAATAAA CCGCCA AAC TGCCGG GACAGCTTATCACTA Dhaf_1022 1115301 - 1116539 + | major facilitator superfamily MFS_1 TERM 1574 1116637 - 1116592 - f 81 -11.3 -2.75535 | opp_overlap 1116595 1116601, overlap 1116601 TCAAGATCCTAAGCA TGATGTAAACCTCAATCATGG ACAG CCTCGATTGAGGTTTACATTC TAAATAACCCTTGAA TERM 1575 1116595 - 1116634 + F 100 -15.2 -3.36175 | opp_overlap 1116592 1116601, overlap 1116601 AGATCCTAAGCATGA TGTAAACCTCAATCATGG ACAG CCTCGATTGAGGTTTACA TTCTAAATAACCCTT TERM 1576 1116628 - 1116601 - f 82 -10.6 -3.70037 | opp_overlap 1116595 1116601, overlap 1116592 TAAGCATGATGTAAA CCTCAATCATGG ACAG CCTCGATTGAGG TTTACATTCTAAATA TERM 1577 1116601 - 1116628 + F 75 -8.4 -3.81339 | opp_overlap 1116601 1116592, overlap 1116595 TAAGCATGATGTAAA CCTCAATCATGG ACAG CCTCGATTGAGG TTTACATTCTAAATA TERM 1578 1117369 - 1117387 + G 80 -8.8 -4.36914 | ATTATCCCATAATCG TCCGCTGG TCC CCGGTGGA TTTTATCAAAGGCAG TERM 1579 1117586 - 1117562 - g 73 -5 -4.82667 | overlap 1117575 TGAGGAGATCAAAAA GGTAGCCA AGATACCGG TGGCCACC GCCTATAGAAATACG Dhaf_1023 1116702 - 1118759 + | NADH:flavin oxidoreductase/NADH oxidase TERM 1580 1119141 - 1119118 - g 71 -3.1 -4.91109 | overlap 1119119 1119133 TTTTTATGATAAAAA TCCCAAAGA CAGAAT TCCTTGGGC CCCAGGGCTGCCGAT Dhaf_1024 1118792 - 1119571 + | hypothetical protein Dhaf_1025 1119630 - 1121216 + | AMP-dependent synthetase and ligase Dhaf_1026 1121297 - 1122529 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1581 1123761 - 1123735 - g 83 -9.5 -4.20797 | TTAAAACGATATAAA GATTTCCCCCA CTTCC TGGAGGAAACC CCGAGAATTTTCAAT Dhaf_1027 1122640 - 1123932 + | FAD dependent oxidoreductase Dhaf_1028 1123929 - 1124216 + | putative ferredoxin TERM 1582 1124248 - 1124279 + F 75 -5.2 -4.87893 | gap 1, opp_overlap 1124246 1124248 GAAGGCAATAAAAGA GAGGCTT-AACCGCA CAA TGGGTTTCAAGCCTC TTTTTGCTTCAGCTT Dhaf_1029 1124467 - 1126515 + | Catalase TERM 1583 1126524 - 1126557 + T 100 -11.8 -4.41348 | gap 1, opp_overlap 1126522 1126525 1126527, overlap 1126525 GGTTTAATGCAAATG AGACCGTT-CCCGGT ATTCC ACCGGGGAACGGTCG TTTCTTTCGGACAGA TERM 1584 1126525 - 1126556 + T 100 -15.3 -3.24488 | gap 1, opp_overlap 1126522 1126525 1126527, overlap 1126524 GTTTAATGCAAATGA GACCGTT-CCCGGT ATTCC ACCGGGGAACGGTC GTTTCTTTCGGACAG TERM 1585 1126556 - 1126525 - T 100 -16 -2.9732 | gap 1, opp_overlap 1126525 1126524, overlap 1126522 1126527 GTTTAATGCAAATGA GACCGTT-CCCGGTA TTC CACCGGGGAACGGTC GTTTCTTTCGGACAG TERM 1586 1126554 - 1126527 - T 95 -12.8 -3.03781 | gap 1, opp_overlap 1126525 1126524, overlap 1126525 1126522 TTAATGCAAATGAGA CCGTT-CCCGGTA TTC CACCGGGGAACGG TCGTTTCTTTCGGAC Dhaf_1030 1127690 - 1126629 - | metal dependent phosphohydrolase TERM 1587 1127375 - 1127352 - G 76 -11.2 -3.18681 | opp_overlap 1127356 TGTTAACCCGATGAA GATATCCTTT TGGA AAAGGATATC CTGAATAATATTGTC TERM 1588 1127771 - 1127751 - H 82 -8.3 -4.28487 | CAGTATAAAATTAAA GTCGCCA TGTGAAC TGGCGAC AAAGGTGTTTAAAGC TERM 1589 1127850 - 1127865 + H 89 -10.4 -3.97088 | CCATAGCTTTGCGTC CCTGGC TTTC GCCAGG TTTGCTATTGTCGAA TERM 1590 1128190 - 1128206 + G 71 -6.6 -4.18197 | CTATATTATCCCCTC TCAAGG CCGTT CCTTGA TTTTGGATACAGGGT Dhaf_1031 1128098 - 1129069 + | beta-lactamase domain protein TERM 1591 1129125 - 1129087 - T 100 -13.1 -3.91897 | gap 1, opp_overlap 1129088 1129089 1129091, overlap 1129088 1129091 TCTTTCAGTGATAAA GTCAGCCCGCCGGGTCCC CAAA AGGAAGCGGCGGGCTG-C TTGTTGTGCCTGGGC TERM 1592 1129125 - 1129088 - T 100 -13.3 -2.94924 | opp_overlap 1129088 1129089 1129091, overlap 1129087 1129091 CTTTCAGTGATAAAG TCAGCCCGCCGGGTCCC CAAA AGGAAGCGGCGGGCTGC TTGTTGTGCCTGGGC TERM 1593 1129088 - 1129125 + T 100 -12.6 -3.8211 | opp_overlap 1129087 1129088 1129091, overlap 1129089 1129091 CTTTCAGTGATAAAG TCAGCCCGCCGGGTCC CCAAAA GGAAGCGGCGGGCTGC TTGTTGTGCCTGGGC TERM 1594 1129089 - 1129124 + T 100 -16.1 -2.88945 | opp_overlap 1129087 1129088 1129091, overlap 1129088 1129091 TTTCAGTGATAAAGT CAGCCCGCCGGGTCC CCAAAA GGAAGCGGCGGGCTG CTTGTTGTGCCTGGG TERM 1595 1129122 - 1129091 - T 93 -13.6 -2.71325 | opp_overlap 1129091 1129089 1129088, overlap 1129087 1129088 TCAGTGATAAAGTCA GCCCGCCGGGTCCC CAAA AGGAAGCGGCGGGC TGCTTGTTGTGCCTG TERM 1596 1129091 - 1129122 + T 95 -12.9 -2.99259 | opp_overlap 1129087 1129088 1129091, overlap 1129089 1129088 TCAGTGATAAAGTCA GCCCGCCGGGTCC CCAAAA GGAAGCGGCGGGC TGCTTGTTGTGCCTG Dhaf_1032 1129612 - 1129163 - | putative signal transduction protein with CBS domains TERM 1597 1130528 - 1130509 - g 76 -10.7 -3.16191 | opp_overlap 1130508, overlap 1130518 1130520 GGAGATCCTGATCAA GGCAGCC AAGATG GGCTGCC CTATCCTCATTGGGG Dhaf_1033 1129865 - 1130665 + | formate dehydrogenase family accessory protein FdhD TERM 1598 1130681 - 1130723 + T 100 -14.5 -4.053 | gap 1, opp_overlap 1130686, overlap 1130682 1130683 TCCTTGGCACATGTT TA-GAAGGCTCTAAAAGCTT CGTA ATGCTTTTAGAGCCTTCATA TTTCTATAAAATACT TERM 1599 1130682 - 1130721 + T 100 -15.2 -3.61946 | opp_overlap 1130686, overlap 1130681 1130683 CCTTGGCACATGTTT AGAAGGCTCTAAAAGCTT CGTA ATGCTTTTAGAGCCTTCA TATTTCTATAAAATA TERM 1600 1130683 - 1130720 + T 100 -18.7 -2.76686 | opp_overlap 1130686, overlap 1130682 1130681 CTTGGCACATGTTTA GAAGGCTCTAAAAGCTT CGTA ATGCTTTTAGAGCCTTC ATATTTCTATAAAAT TERM 1601 1130717 - 1130686 - T 100 -14.6 -3.32343 | opp_overlap 1130683 1130682 1130681 GGCACATGTTTAGAA GGCTCTAAAAGCTT CGTA ATGCTTTTAGAGCC TTCATATTTCTATAA Dhaf_1034 1131289 - 1130744 - | transcriptional regulator, XRE family Dhaf_1035 1131843 - 1131304 - | transcriptional regulator, XRE family Dhaf_1036 1131993 - 1132679 + | sugar fermentation stimulation protein TERM 1602 1132722 - 1132774 + T 100 -20.3 -4.02999 | opp_overlap 1132727, overlap 1132727 GCTTAATAGATAGTC AAAAATAGTACAGCCAGCAGATC GATTAAA GATTTGCTGGCTGTACTATTTTA TTTCCTATGTTTTTC TERM 1603 1132727 - 1132769 + T 100 -20.2 -4.98061 | opp_overlap 1132727, overlap 1132722 ATAGATAGTCAAAAA TAGTACAGCCAGCAGATC GATTAAA GATTTGCTGGCTGTACTA TTTTATTTCCTATGT TERM 1604 1132769 - 1132727 - T 100 -18 -4.73448 | opp_overlap 1132727 1132722 ATAGATAGTCAAAAA TAGTACAGCCAGCAGATC GATTAAA GATTTGCTGGCTGTACTA TTTTATTTCCTATGT Dhaf_1037 1133941 - 1132772 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 1605 1134340 - 1134320 - g 73 -7.5 -4.15044 | opp_overlap 1134333 TGCTTGCGCAACAAA GGAGCGAAT CCC AGCCGCTCC GGTCATTTTATGGCC Dhaf_1038 1134236 - 1135384 + | cysteine desulfurase family protein Dhaf_1039 1135667 - 1135945 + | hypothetical protein Dhaf_1040 1135949 - 1136224 + | hypothetical protein Dhaf_1041 1136200 - 1136412 + | hypothetical protein TERM 1606 1136499 - 1136463 - f 100 -16 -3.71998 | gap 1, opp_overlap 1136463 TAGTGAGTAACATAA GAGGACCAC-AGCAGCC TAAA GGCTCCTTGTGGTCCTC TTTTCCTATTCTTAA TERM 1607 1136463 - 1136499 + F 100 -16 -4.49937 | gap 1, opp_overlap 1136463 TAGTGAGTAACATAA GAGGACCAC-AGCAGCC TAAA GGCTCCTTGTGGTCCTC TTTTCCTATTCTTAA Dhaf_1042 1136765 - 1137490 + | ABC transporter related Dhaf_1043 1137530 - 1138366 + | extracellular solute-binding protein family 3 Dhaf_1044 1138453 - 1139040 + | polar amino acid ABC transporter, inner membrane subunit Dhaf_1045 1139040 - 1139687 + | polar amino acid ABC transporter, inner membrane subunit TERM 1608 1139694 - 1139727 + T 100 -12.6 -4.84311 | gap 1, opp_overlap 1139690 AGCTATTAAATGGTT GGCTCCAG-AGAAGC AAAGC GCTTTTTCTGGAGCC TTTTATTGTATGCCC TERM 1609 1139789 - 1139777 - T 71 -4.8 -4.59773 | TTGTATGGGTAAAAA GAGG AGGAA CCTC TGACTGGCTACATCG Dhaf_1046 1142353 - 1139759 - | pyruvate phosphate dikinase PEP/pyruvate-binding TERM 1610 1142679 - 1142709 + H 75 -3.4 -5.10163 | gap 1 AGCGGTGAAGTGATA GAGAGAGC-CT AAGAAAAAAC AGAGCTCTCTC TTTTATTTTAAGATT TERM 1611 1142871 - 1142914 + H 85 -4 -5.49568 | gap 2 TGTTTAAGAGGATAA GAGAGCCCCCA-T-TGATCG AATAAC CGATCAGGCTGTGGGTTCTC TTTTTATTTTACATT TERM 1612 1143149 - 1143165 + G 76 -8.7 -3.99405 | opp_overlap 1143148 CCGTACCAAAGGCAT CCGCATC GGT GATGTGG TTTATGATGAATTCC Dhaf_1047 1143024 - 1143341 + | nitrogen regulatory protein P-II Dhaf_1048 1143381 - 1143764 + | nitrogen regulatory protein P-II TERM 1613 1144149 - 1144136 - g 75 -8.1 -4.25104 | CTTTCTTGAGGAAAA CGGTG CTTA CACCG AGGATACAGATTATG Dhaf_1049 1143804 - 1144631 + | nitrogenase iron protein Dhaf_1050 1144697 - 1146130 + | nitrogenase molybdenum-iron protein alpha chain Dhaf_1051 1146156 - 1147574 + | nitrogenase molybdenum-iron protein beta chain TERM 1614 1148108 - 1148086 - g 71 -4 -4.82901 | overlap 1148088 1148089 TTTGGGCGATAAAAA CATCGGCAAC CGG ATTGCCGGGG AAGTTCTCTTCGACC TERM 1615 1148550 - 1148540 - g 79 -3.2 -5.24129 | overlap 1148541 GCCGGCTATAAAAAA TGCC TGG AGCA TAAACAGGCCATCTT TERM 1616 1148896 - 1148915 + G 71 -9.2 -3.60818 | TGCCGGGAGCCTGGC CCGGACGG TGAA CAGTCCGG TTTGGGAACTTTTAA Dhaf_1052 1147604 - 1148962 + | nitrogenase MoFe cofactor biosynthesis protein NifE Dhaf_1053 1148964 - 1150262 + | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN Dhaf_1054 1150274 - 1150645 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein Dhaf_1055 1150657 - 1150917 + | ferredoxin III, nif-specific TERM 1617 1151314 - 1151303 - g 71 -7.2 -4.13014 | CTGAGAGGGGTAAAA CGGG ATTT CCCG GAGATGATTCTGTGC Dhaf_1056 1150958 - 1151800 + | Radical SAM domain protein TERM 1618 1151928 - 1151908 - g 77 -6.7 -4.58424 | opp_overlap 1151907 1151910 TATGATGAGACAAAA CAGCGCCGG GGT CTGGAGCTG ATGTTGGAAGAGGGT Dhaf_1057 1151800 - 1152249 + | GCN5-related N-acetyltransferase Dhaf_1058 1152282 - 1152668 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein Dhaf_1059 1152670 - 1153803 + | pyruvate carboxyltransferase TERM 1619 1154109 - 1154064 - f 86 -11.3 -3.31877 | gap 1, opp_overlap 1154066, overlap 1154059 AAATCAATAAGGCAA TGGCGCCGTTACAAG-AATCTA AGA CAGATTACTTGCAACGGCGCTT TCTTGTTTCAGCTAT TERM 1620 1154066 - 1154107 + F 100 -15.4 -4.57581 | gap 1, opp_overlap 1154059 1154064 ATCAATAAGGCAATG GCGCCGTTACAAG-AATCT AAGAC AGATTACTTGCAACGGCGC TTTCTTGTTTCAGCT Dhaf_1060 1154176 - 1154613 + | HutP family protein Dhaf_1061 1154835 - 1156220 + | ammonium transporter Dhaf_1062 1157638 - 1156391 - | transposase IS116/IS110/IS902 family protein TERM 1621 1156821 - 1156836 + g 73 -3.3 -4.9138 | TGCCTGATTTCTGCT TCGAT TGCCTT ATCGA TTTTCTTTACCTGCT TERM 1622 1158003 - 1158054 + H 89 -11.7 -3.54424 | gap 1, opp_overlap 1158015 CTGTGGACAGTGCCA GCCTG-TGGAAAAGCCCTTTGGGG TCTGT CCTAAAAGAGCTTTCCCAACAGGC TTTGGACAAGTCGAA Dhaf_1063 1158278 - 1158616 + | nitrogen regulatory protein P-II TERM 1623 1158629 - 1158660 + F 100 -16 -5.5604 | gap 1 TAAGTATAACGCTCG GAGGCCGGAAGAGGA TTG TTCTCT-CCGGCCTC TTTTTTGTTGATTCA TERM 1624 1158873 - 1158821 - f 72 -7.1 -4.06633 | opp_overlap 1158831 1158860, overlap 1158831 CATAAACTTAAATAA GGGAAGCAAAGGCGCTTATAAAGAC TTT ATCTTTATAAGCGCCTTTTGTGCAT GGAAAAATATGCAAA TERM 1625 1158831 - 1158863 + F 100 -18 -4.42386 | opp_overlap 1158821 1158831, overlap 1158860 AATAAGGGAAGCAAA GGCGCTTATAAAGA CTTTA TCTTTATAAGCGCC TTTTGTGCATGGAAA TERM 1626 1158863 - 1158831 - f 100 -18.7 -3.97659 | opp_overlap 1158831 1158860, overlap 1158821 AATAAGGGAAGCAAA GGCGCTTATAAAGAC TTT ATCTTTATAAGCGCC TTTTGTGCATGGAAA TERM 1627 1159705 - 1159691 - g 80 -8.6 -4.32678 | overlap 1159688 GTCCTAAACAAAGAA GGCTAT GTG ATAGCC AGCCGTAATCGCAAA Dhaf_1064 1158902 - 1159906 + | methyl-accepting chemotaxis sensory transducer with Cache sensor Dhaf_1065 1160046 - 1160384 + | nitrogen regulatory protein P-II TERM 1628 1160429 - 1160393 - f 79 -3.1 -5.26875 | gap 1, opp_overlap 1160395, overlap 1160395 GCTGTAAGCAAAAAA GAGGACCCTTGAGT TTATTGTTTT ACTC-AGGGTCCTT TTTTATTTTCTAAAT TERM 1629 1160395 - 1160427 + F 100 -5.7 -5.86976 | gap 1, opp_overlap 1160393 1160395 TGTAAGCAAAAAAGA GGACCCTTGAGT TTATTGTTTT ACTC-AGGGTCC TTTTTTATTTTCTAA TERM 1630 1160427 - 1160395 - f 70 -5.7 -4.26777 | gap 1, opp_overlap 1160395, overlap 1160393 TGTAAGCAAAAAAGA GGACCCTTGAGT TTATTGTTTT ACTC-AGGGTCC TTTTTTATTTTCTAA Dhaf_1066 1160678 - 1161694 + | TRAP dicarboxylate transporter, DctP subunit Dhaf_1067 1161803 - 1162873 + | TRAP dicarboxylate transporter, DctP subunit TERM 1631 1162898 - 1162918 + F 100 -11.8 -5.252 | opp_overlap 1162897 1162896 ATAGAGGGTAAAATT GGGGCGGG ATTAC CCCGTCCC TTTTTTATCGCGCTA Dhaf_1068 1163024 - 1163557 + | Tripartite ATP-independent periplasmic transporter DctQ component Dhaf_1069 1163535 - 1164815 + | TRAP dicarboxylate transporter, DctM subunit TERM 1632 1164845 - 1164877 + T 100 -16.4 -4.16681 | opp_overlap 1164847, overlap 1164847 CAATACCCTTTTATA AAGCCCTCTTCAGG TTTTT CCTGAAGAGGGCTC TTTTCGGGTCATATT TERM 1633 1164875 - 1164847 - T 100 -19 -3.86524 | opp_overlap 1164847 1164845 ATACCCTTTTATAAA GCCCTCTTCAGG TTTTT CCTGAAGAGGGC TCTTTTCGGGTCATA TERM 1634 1164847 - 1164875 + T 100 -19 -3.67634 | opp_overlap 1164847, overlap 1164845 ATACCCTTTTATAAA GCCCTCTTCAGG TTTTT CCTGAAGAGGGC TCTTTTCGGGTCATA Dhaf_1070 1166086 - 1164905 - | 2-alkenal reductase TERM 1635 1166289 - 1166322 + r 88 -11.2 -3.76226 | opp_overlap 1166289 CCATTAATGTAAAAA CGGCTGAACAC-GTTC CAAT GAACCGTGT-CAGCCG TTGTGTTCTCCACTT TERM 1636 1166322 - 1166289 - R 100 -12.5 -4.7629 | gap 1, opp_overlap 1166289 CCATTAATGTAAAAA CGGCTGAACACGTTCC AAT GAACCGTGT-CAGCCG TTGTGTTCTCCACTT Dhaf_1071 1166546 - 1166346 - | Domain of unknown function DUF1858 TERM 1637 1166635 - 1166648 + H 82 -3.1 -5.46629 | overlap 1166636 ATTTTTTTGTAATTT TTGAC TGAG GTCAG TTTTTTTAAGCTATT Dhaf_1072 1166739 - 1167029 + | hypothetical protein TERM 1638 1167236 - 1167222 - f 71 -10 -2.58418 | overlap 1167221 1167220 1167224 GTCCGAGAGAAAACT CACAGC CTG GCTGTG TCACGGAGGGATAAA TERM 1639 1167253 - 1167287 + F 100 -9.3 -4.98531 | opp_overlap 1167253 CACGGAGGGATAAAA GCCTGGGAGAGACTG ATGAA CAGTATCTCTTGGGC TTTTTAATTTGGAAA Dhaf_1073 1167329 - 1167670 + | small multidrug resistance protein Dhaf_1074 1167670 - 1167984 + | small multidrug resistance protein Dhaf_1075 1168074 - 1168943 + | spermidine synthase TERM 1640 1168997 - 1169035 + T 100 -11.8 -4.34402 | opp_overlap 1168995, overlap 1168999 1169000 ACAATAGGCAAATTT TAAGGGGTGCTGATAGTT TCG GAATATCAGCACCCCCTG TTTTGCTGTCAGAGG TERM 1641 1168999 - 1169033 + T 100 -12.2 -3.77806 | opp_overlap 1168995, overlap 1168997 1169000 AATAGGCAAATTTTA AGGGGTGCTGATAGTT TCG GAATATCAGCACCCCC TGTTTTGCTGTCAGA TERM 1642 1169000 - 1169032 + T 100 -15.7 -2.86202 | opp_overlap 1168995, overlap 1168999 1168997 ATAGGCAAATTTTAA GGGGTGCTGATAGTT TCG GAATATCAGCACCCC CTGTTTTGCTGTCAG Dhaf_1076 1170462 - 1169044 - | transcriptional regulator, GntR family with aminotransferase domain TERM 1643 1170140 - 1170162 + g 77 -4 -5.15969 | opp_overlap 1170142, overlap 1170142 ACGGAATTTTTGACG AAGTCGGCAT AAT AGGCCGGCTC TTTTTTAGATTGGAG TERM 1644 1170142 - 1170160 + g 71 -6.6 -4.20888 | opp_overlap 1170142, overlap 1170140 GGAATTTTTGACGAA GTCGGCAT AAT AGGCCGGC TCTTTTTTAGATTGG Dhaf_1077 1170577 - 1171452 + | pyridoxine biosynthesis protein Dhaf_1078 1171454 - 1172053 + | SNO glutamine amidotransferase TERM 1645 1172081 - 1172104 + F 95 -7.4 -5.45802 | overlap 1172082 TATCTCCAGACGATT TGGCACTCCT TTGC GGGAGTGTCG TTTTTATTTTAGAAG TERM 1646 1172082 - 1172103 + F 78 -8.7 -3.86397 | overlap 1172081 ATCTCCAGACGATTT GGCACTCCT TTGC GGGAGTGTC GTTTTTATTTTAGAA Dhaf_1079 1172292 - 1173506 + | threonine dehydratase Dhaf_1080 1173585 - 1174253 + | protein of unknown function DUF159 Dhaf_1081 1174320 - 1175354 + | Threonine aldolase TERM 1647 1175567 - 1175583 + G 80 -8.7 -4.40561 | overlap 1175563 CAGATTCCCGAGATC GGGAGGA AGC TCTTCCC TTCTTTTTCAGAAGA Dhaf_1082 1175351 - 1176028 + | HAD-superfamily hydrolase, subfamily IA, variant 1 TERM 1648 1176029 - 1176041 + F 70 -3.5 -4.79667 | overlap 1176025 GGAATTTTAAGTTGA TTATT ATC AATAA TTTTTAATAAATTTT TERM 1649 1176496 - 1176480 - g 70 -2.3 -4.99043 | GTCCGACAAAGAAAA GTTTGAA GGA TTTAAAC GTAAGATGATTGAGG Dhaf_1083 1176124 - 1176888 + | transcriptional regulator, MerR family TERM 1650 1176913 - 1176947 + T 74 -4.3 -5.06016 | opp_overlap 1176914 1176915 1176921, overlap 1176908 1176915 1176917 1176921 ATACACTATTAAAAA ATGCTAAAGGCACTC GTTTA GAGTGCCTTTGCTAG TTTTCTTTGTATGGT TERM 1651 1176945 - 1176914 - T 95 -8.1 -5.20216 | gap 1, opp_overlap 1176913 1176908 1176915 1176917 1176921, overlap 1176915 1176921 TACACTATTAAAAAA TGCTAAAGGCACTC GTTTA GAGTGCCTTT-GCT AGTTTTCTTTGTATG TERM 1652 1176944 - 1176915 - T 90 -11.6 -3.71045 | gap 1, opp_overlap 1176913 1176908 1176915 1176917 1176921, overlap 1176914 1176921 ACACTATTAAAAAAT GCTAAAGGCACTC GTTTA GAGTGCCTTT-GC TAGTTTTCTTTGTAT TERM 1653 1176915 - 1176944 + T 86 -11.6 -3.36868 | gap 1, opp_overlap 1176915 1176914 1176921, overlap 1176913 1176908 1176917 1176921 ACACTATTAAAAAAT GCTAAAGGCACTC GTTTA GAGTGCCTTT-GC TAGTTTTCTTTGTAT TERM 1654 1176917 - 1176943 + T 80 -11.7 -2.60494 | opp_overlap 1176915 1176914 1176921, overlap 1176915 1176913 1176908 1176921 ACTATTAAAAAATGC TAAAGGCACTC GTTTA GAGTGCCTTTG CTAGTTTTCTTTGTA TERM 1655 1176939 - 1176921 - T 86 -10.3 -3.8374 | opp_overlap 1176917 1176915 1176913 1176908 1176921, overlap 1176915 1176914 TTAAAAAATGCTAAA GGCACTC GTTTA GAGTGCC TTTGCTAGTTTTCTT TERM 1656 1176921 - 1176939 + T 89 -10.3 -3.95567 | opp_overlap 1176921 1176915 1176914, overlap 1176917 1176915 1176913 1176908 TTAAAAAATGCTAAA GGCACTC GTTTA GAGTGCC TTTGCTAGTTTTCTT Dhaf_1084 1177520 - 1176930 - | hypothetical protein TERM 1657 1177934 - 1177957 + H 100 -6 -5.92399 | gap 1 CTGAAATGACACTAT CCTCTCC-GGT AAC ACTAGGAGGGG TTTTTTATTTTATTA TERM 1658 1178707 - 1178690 - g 73 -3.4 -4.99134 | ATGGGAAATCAAAAA GCCAAG GCTAAT CTTGAC CGGGCCAAAAAAAGT Dhaf_1085 1178012 - 1179616 + | ABC transporter related TERM 1659 1179656 - 1179628 - f 100 -13.3 -3.11173 | opp_overlap 1179628, overlap 1179619 ATAGAAGTTATTTAA GTTAGGGCAAG GGCCGGT CTTGCCCTAAC TTTTCTAAATTTCTT TERM 1660 1179628 - 1179656 + F 100 -14 -4.53707 | opp_overlap 1179628 1179619 ATAGAAGTTATTTAA GTTAGGGCAAGG GCCGG TCTTGCCCTAAC TTTTCTAAATTTCTT Dhaf_1086 1179789 - 1180064 + | hypothetical protein TERM 1661 1180094 - 1180117 + F 100 -13.2 -4.89063 | opp_overlap 1180098 CAGCCCATCGGTTAG CAGACCCTGA GTTA TCGGGGTCTG TTTATTTTTGAGTGG TERM 1662 1180257 - 1180200 - f 100 -12.5 -3.41587 | gap 1, opp_overlap 1180206 1180211 GTTGACAAAAGGTAA TGTGGTGGCTATACTTATCTAGTAATTT AGT AAATTACTAGATAAGTATAGCCTG-ATA TAGATGGTCAAATAT TERM 1663 1180206 - 1180252 + F 100 -27.2 -2.65264 | opp_overlap 1180200, overlap 1180211 AAAAGGTAATGTGGT GGCTATACTTATCTAGTAATTT AGT AAATTACTAGATAAGTATAGCC TGATATAGATGGTCA Dhaf_1087 1180298 - 1180777 + | hypothetical protein Dhaf_1088 1180781 - 1181131 + | hypothetical protein Dhaf_1089 1181250 - 1182530 + | glycoside hydrolase family 3 domain protein TERM 1664 1182569 - 1182621 + T 81 -7.1 -4.58395 | gap 1, opp_overlap 1182577, overlap 1182571 1182577 ATACAGGTCATAACA GTTATAAAGGGAGCAAGC-CTTGC CTATGT GCAAGTGCTTGCTCCCTTTGCGTG TTTTTGCAGGCTGCG TERM 1665 1182571 - 1182619 + T 100 -14.1 -3.90762 | gap 1, opp_overlap 1182577, overlap 1182569 1182577 ACAGGTCATAACAGT TATAAAGGGAGCAAGC-CTTGC CTATGT GCAAGTGCTTGCTCCCTTTGCG TGTTTTTGCAGGCTG TERM 1666 1182613 - 1182577 - T 100 -17.5 -3.98842 | gap 1, opp_overlap 1182571 1182569 1182577 CATAACAGTTATAAA GGGAGCAAGC-CTTGC CTATGT GCAAGTGCTTGCTCCC TTTGCGTGTTTTTGC TERM 1667 1182577 - 1182613 + T 100 -17.5 -3.88464 | gap 1, opp_overlap 1182577, overlap 1182571 1182569 CATAACAGTTATAAA GGGAGCAAGC-CTTGC CTATGT GCAAGTGCTTGCTCCC TTTGCGTGTTTTTGC Dhaf_1090 1184243 - 1182651 - | hypothetical protein Dhaf_1091 1184752 - 1184243 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 1668 1184988 - 1185009 + G 72 -10.9 -2.71731 | opp_overlap 1184988, overlap 1184990 TACAGTTATGTTAAA CATCCGGAG GACG CTCTGGATG TAGTTCAGGAGTCGA Dhaf_1092 1184895 - 1185416 + | RNA polymerase, sigma-24 subunit, ECF subfamily Dhaf_1093 1185409 - 1186314 + | hypothetical protein TERM 1669 1186375 - 1186410 + F 100 -12.7 -4.1399 | opp_overlap 1186375 1186381, overlap 1186381 ATAGTTAAAGGTAAA GAGAAACCCGGCCAA TAAAGT TTGGCTGAGTTTCTC TTTCTGTATAGGTGG TERM 1670 1186410 - 1186375 - f 100 -12.7 -3.86311 | opp_overlap 1186375 1186381, overlap 1186381 ATAGTTAAAGGTAAA GAGAAACCCGGCCAA TAAAGT TTGGCTGAGTTTCTC TTTCTGTATAGGTGG Dhaf_1094 1186502 - 1186651 + | ABC transporter related Dhaf_1095 1186694 - 1186987 + | ABC heme exporter, inner membrane subunit B Dhaf_1096 1187790 - 1186993 - | Cobyrinic acid ac-diamide synthase TERM 1671 1187477 - 1187441 - G 74 -3 -5.10461 | TTCACGGAACAAAAA CACCCTTGGCTATCCG TTCTG CCCATAGCCAAAAATG CATAGTCGTCGGATT Dhaf_1097 1188675 - 1187860 - | methyl-accepting chemotaxis sensory transducer Dhaf_1098 1189540 - 1188785 - | CO dehydrogenase/acetyl-CoA synthase beta subunit-like protein Dhaf_1099 1190376 - 1189582 - | CoA-substrate-specific enzyme activase TERM 1672 1190399 - 1190449 + r 74 -6.8 -4.258 | opp_overlap 1190399 1190404, overlap 1190401 1190404 TACTCCCTAATACAA TTTAATGAGCGGCAGATTGAATCC TTT GGGCTCAGTTTGCCGCTCATCGTC TTTGTTCCTCAATAG TERM 1673 1190401 - 1190447 + r 100 -13.8 -3.72775 | opp_overlap 1190399 1190404, overlap 1190399 1190404 CTCCCTAATACAATT TAATGAGCGGCAGATTGAATCC TTT GGGCTCAGTTTGCCGCTCATCG TCTTTGTTCCTCAAT TERM 1674 1190404 - 1190444 + r 100 -17.7 -2.95632 | opp_overlap 1190399 1190404, overlap 1190401 1190399 CCTAATACAATTTAA TGAGCGGCAGATTGAATCC TTT GGGCTCAGTTTGCCGCTCA TCGTCTTTGTTCCTC TERM 1675 1190444 - 1190404 - R 100 -13.3 -3.29147 | opp_overlap 1190404 1190401 1190399, overlap 1190399 CCTAATACAATTTAA TGAGCGGCAGATTGAATCC TTT GGGCTCAGTTTGCCGCTCA TCGTCTTTGTTCCTC Dhaf_1100 1191812 - 1190502 - | 2-hydroxyglutaryl-CoA dehydratase D-component Dhaf_1101 1192954 - 1191815 - | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 1676 1192384 - 1192395 + g 70 -2.2 -4.9138 | CTGCACCGCTTAGGG GAGG ATTT TCTC TTTTCTTTAACTCGT Dhaf_1102 1193536 - 1193156 - | FMN-binding domain protein Dhaf_1103 1195378 - 1193582 - | fumarate reductase/succinate dehydrogenase flavoprotein domain protein Dhaf_1104 1196464 - 1195568 - | transcriptional regulator, LysR family TERM 1677 1196365 - 1196391 + g 75 -5.9 -4.64861 | GCGCACTGATTTTCT TGCTCATTGCC GGTTG GGTAATGAACA TTTCTTTTGCGGCGA Dhaf_1105 1196973 - 1196572 - | hypothetical protein Dhaf_1106 1197670 - 1196978 - | cobalamin synthesis protein P47K TERM 1678 1197732 - 1197678 - R 90 -11.1 -3.91364 | overlap 1197682 AAACGCATACAACAA TACAGTCCCGGAAAAATCA-GACTAAG AAC CTAAGTCACAATTTTTCCGGGAC-ATA CGAGATTAAGGGAAT TERM 1679 1197729 - 1197682 - R 100 -16.6 -3.33395 | gap 1, overlap 1197678 GCATACAACAATACA GTCCCGGAAAAATCA-GACTAAG AAC CTAAGTCACAATTTTTCCGGGAC ATACGAGATTAAGGG Dhaf_1107 1198432 - 1197800 - | cobalamin B12-binding domain protein Dhaf_1108 1199284 - 1198481 - | dihydropteroate synthase DHPS TERM 1680 1199616 - 1199577 - R 100 -10.2 -4.94168 | gap 1, opp_overlap 1199577 1199608 ATAGAATAAAAGAAA TATGCCCGGAAAATCGAAG CAA CATCAAT-TTCCAGGCATA TTTTTATGTCAGGTT TERM 1681 1199577 - 1199616 + r 82 -5.8 -4.98522 | gap 1, opp_overlap 1199577, overlap 1199608 ATAGAATAAAAGAAA TATGCCCGGAAAATCGAAG CAA CATCAAT-TTCCAGGCATA TTTTTATGTCAGGTT TERM 1682 1199658 - 1199691 + r 70 -2.6 -4.96848 | gap 1, overlap 1199660 TAAACATTCTATCCC CGTCTATCAG-CTTT ATAAA AAAGTCTGATAGATA TTTTTATATAGAGAA TERM 1683 1199660 - 1199689 + r 73 -7.4 -4.11141 | gap 1, overlap 1199658 AACATTCTATCCCCG TCTATCAG-CTTT ATAAA AAAGTCTGATAGA TATTTTTATATAGAG Dhaf_1109 1201198 - 1199651 - | putative transcriptional regulator, PucR family Dhaf_1110 1201386 - 1202402 + | hypothetical protein TERM 1684 1202441 - 1202490 + F 71 -4.1 -4.84017 | opp_overlap 1202443, overlap 1202443 CTGCTATAAATGAAT GAGGGGCTGTCGCAAAACGTTTA TAAA TTAACGTAAGGCGGCAGGCCCTG TTTTTCTAGAAAATT TERM 1685 1203415 - 1203397 - g 79 -11.8 -3.09878 | overlap 1203399 CCGAGCCATTCAAGA GATAACCC ATG GGGTTATC AGCCAGACCGATAGT TERM 1686 1203582 - 1203558 - g 100 -11.6 -5.0133 | opp_overlap 1203557 1203556 CAGGTTCCGAAAAAA TCCATCTGAT GGATA ATCAGATGGA CATTATTAAGGAGAC Dhaf_1111 1202741 - 1204204 + | methyl-accepting chemotaxis sensory transducer TERM 1687 1204297 - 1204331 + F 77 -8.6 -3.97709 | opp_overlap 1204297 GCTGATTAAAACAAA TACCGGGAGTAGCGCT TAA AATGCTGTTCTCGGTA TTCTTATTCAGTCAT TERM 1688 1204961 - 1205001 + F 86 -11.4 -3.30771 | gap 1, opp_overlap 1204961 1204966, overlap 1204966 CAGATGTAGGTATAA GAAAATGGTGAACAAGGAG TAAT TTCCC-GTTCACCATTTTC TTATACCCGGTGTAA TERM 1689 1205001 - 1204961 - f 100 -12.9 -3.37354 | gap 1, opp_overlap 1204961 1204966, overlap 1204966 CAGATGTAGGTATAA GAAAATGGTGAACAAGGA GTAATT TCCC-GTTCACCATTTTC TTATACCCGGTGTAA TERM 1690 1204966 - 1204996 + F 75 -5.5 -4.77165 | gap 1, opp_overlap 1204966 1204961, overlap 1204961 GTAGGTATAAGAAAA TGGTGAACAAGGAG TAAT TTCCC-GTTCACCA TTTTCTTATACCCGG TERM 1691 1204996 - 1204966 - f 82 -7 -4.79352 | gap 1, opp_overlap 1204961 1204966, overlap 1204961 GTAGGTATAAGAAAA TGGTGAACAAGGA GTAATT TCCC-GTTCACCA TTTTCTTATACCCGG TERM 1692 1205181 - 1205191 + G 77 -6.8 -4.62471 | overlap 1205174 GAAACCTTTTTTCAG GTCC TGA GGAC TTTTTCCGGATTCCG Dhaf_1112 1205064 - 1205564 + | RNA polymerase, sigma-24 subunit, ECF subfamily Dhaf_1113 1205561 - 1206685 + | hypothetical protein TERM 1693 1206693 - 1206712 + F 100 -10 -4.65895 | opp_overlap 1206693 1206691 1206689 AATCATAAAAGGAGA GGGGCTGT GCGA ACAGCCTC TTTTTAGCTGGACAA TERM 1694 1207382 - 1207394 + G 75 -3.3 -5.06116 | GTTATTACAGCGGCT CTGGG TGT CTCGG TTTTGTTGTTCTTTT Dhaf_1114 1206839 - 1208086 + | major facilitator superfamily MFS_1 Dhaf_1115 1208149 - 1209054 + | transcriptional regulator, LysR family Dhaf_1116 1210486 - 1209194 - | major facilitator superfamily MFS_1 TERM 1695 1209761 - 1209785 + g 89 -5.8 -5.34857 | AATTTTAGTTTTGAG GAATTCCATT TTGAT GATGGGATTC TTTTGTTTTCTTTCG TERM 1696 1209870 - 1209860 - G 71 -8.2 -3.66844 | GGCAGATTCTAACAA GCCG AAC CGGC CCTGATGGCTGAAGG Dhaf_1117 1213205 - 1210530 - | pyruvate phosphate dikinase PEP/pyruvate-binding TERM 1697 1211242 - 1211252 + g 77 -4.6 -4.90266 | ACCAGATCATCCGCC GCCT TCA GGGC TTTTTCCTTGGTAAG TERM 1698 1211611 - 1211624 + g 73 -2.3 -5.07486 | ATACTGGTGTAGTTC CGGCT TCCC AGCAG TTTTTCTTCCCAATG TERM 1699 1211894 - 1211883 - G 77 -4.4 -5.04987 | opp_overlap 1211873 1211883, overlap 1211873 AATAGGCTTAAAAAA GCTT TTAA AAGC TTTAACCGTTTTTTC TERM 1700 1212464 - 1212477 + g 73 -3.7 -4.83615 | overlap 1212447 CGCCGCCCGGGACGG GCAGG ATAG CCAGC TTTTTCTCGGCGATG Dhaf_1118 1213823 - 1213218 - | transcriptional regulator, TetR family TERM 1701 1213851 - 1213864 + H 73 -3.9 -5.01535 | overlap 1213849 CCTCCCTAATGATTA TATAC TATA GTATA TTTTTATCCTTATGA Dhaf_1119 1214029 - 1214400 + | transcriptional regulator, PadR-like family Dhaf_1120 1214387 - 1215046 + | hypothetical protein Dhaf_1121 1215070 - 1215633 + | hypothetical protein TERM 1702 1215615 - 1215657 + F 100 -12.9 -4.65895 | gap 1, opp_overlap 1215631 AGGGAGTGCTAATCG GGGGTGTGTTGCGAAATGAA CTAT TTCATTGCGCAGCA-GCCCC TTTTTACGTGGAAGG Dhaf_1122 1215803 - 1216993 + | methyl-accepting chemotaxis sensory transducer Dhaf_1123 1217109 - 1217726 + | hypothetical protein Dhaf_1124 1217800 - 1218435 + | hypothetical protein TERM 1703 1218450 - 1218483 + T 100 -14.1 -3.53444 | gap 1, opp_overlap 1218456, overlap 1218456 AAGGCGATAAACAGG CGAAAACGCATCCGCA ATT TG-GGATGCGTTTTTG TTTGGAAACCAATCC TERM 1704 1218456 - 1218477 + T 100 -9.5 -5.27335 | gap 1, opp_overlap 1218456, overlap 1218450 ATAAACAGGCGAAAA CGCATCCGCA ATT TG-GGATGCG TTTTTGTTTGGAAAC TERM 1705 1218477 - 1218456 - T 85 -9.5 -4.2243 | gap 1, opp_overlap 1218456 1218450 ATAAACAGGCGAAAA CGCATCCGCA ATT TG-GGATGCG TTTTTGTTTGGAAAC Dhaf_1125 1219201 - 1218548 - | NADPH-dependent FMN reductase Dhaf_1126 1219634 - 1219936 + | ACT domain-containing protein TERM 1706 1220269 - 1220234 - g 71 -6.3 -4.183 | overlap 1220251 TTAATCCCGAAGAAA TGGTCCGCT-TGGCTAA AGCC TTAGACAGAGCGG-CCA AGACGGTGGGGATTA TERM 1707 1220925 - 1220905 - g 90 -7.6 -5.0133 | gap 1, opp_overlap 1220921 GATGCGGTGAAAAAA GGAGGA-GC CATG GCATCCTCC CATGTGGGCGGTTTA Dhaf_1127 1219948 - 1221315 + | protein of unknown function DUF711 Dhaf_1128 1221452 - 1221787 + | Cupin 2 conserved barrel domain protein TERM 1708 1221981 - 1221931 - f 82 -7.9 -4.51743 | gap 1, opp_overlap 1221932, overlap 1221932 CTATCATGAAATAAA TGACGGTATAATATCTGACCAT TTTTAGGT ATGTTCAGAT-TTATACCGTCT TTGTTTTATTAACAG TERM 1709 1221932 - 1221980 + F 100 -11.4 -4.87892 | gap 1, opp_overlap 1221931 1221932 TATCATGAAATAAAT GACGGTATAATATCTGACCAT TTTTAGGT ATGTTCAGAT-TTATACCGTC TTTGTTTTATTAACA TERM 1710 1221980 - 1221932 - f 86 -11.4 -3.30323 | gap 1, opp_overlap 1221932, overlap 1221931 TATCATGAAATAAAT GACGGTATAATATCTGACCAT TTTTAGGT ATGTTCAGAT-TTATACCGTC TTTGTTTTATTAACA Dhaf_1129 1222242 - 1222433 + | hypothetical protein TERM 1711 1222531 - 1222519 - g 71 -4.8 -4.60487 | GAGGATGCGGAAAAA CTGC GCATA GCAG AAAGAGAAATCACCT TERM 1712 1222942 - 1222958 + G 74 -6.6 -4.42721 | GACAAGCAGATGGTT GAAGCA AGCGC TGCTTC TTTCTTGTGTGATTA Dhaf_1130 1222417 - 1223025 + | filamentation induced by cAMP protein Fic TERM 1713 1223297 - 1223275 - f 100 -8.5 -6.04324 | opp_overlap 1223296 GTAAAAAATAAAAAA TCTGCCACA ATATA TGTGACAGA AATGTGAATTTCTTT Dhaf_1131 1223406 - 1224320 + | methyltransferase TERM 1714 1224367 - 1224395 + F 82 -6.8 -4.78237 | CTATTGTTCTCCAAA GACATACTTTCT CACAA GGAGGGTATGTC TTTTCTTATAAGATA Dhaf_1132 1224485 - 1224859 + | hypothetical protein Dhaf_1133 1225014 - 1227365 + | aconitate hydratase domain protein TERM 1715 1227400 - 1227437 + F 89 -6.4 -5.27399 | gap 2, opp_overlap 1227400 GATAATAGAAAAAAA CTATGCAGAGC--CTGGT GAAA GCCAGCCGCGCTGCATAG TTTTTTCGTATATTA TERM 1716 1227437 - 1227400 - f 100 -5.7 -5.84432 | gap 2, opp_overlap 1227400 GATAATAGAAAAAAA CTATGCAGAGC--CTGG TGAAAG CCAGCCGCGCTGCATAG TTTTTTCGTATATTA Dhaf_1134 1227572 - 1229113 + | Phosphoenolpyruvate carboxykinase (ATP) TERM 1717 1229152 - 1229117 - f 100 -13.4 -3.70919 | opp_overlap 1229117 1229120, overlap 1229108 1229120 CCGAAAGCTTAATAA GAAGCTCCTGAATGGT GTGG AGCCTTCAGGAGCTTC TTTGGGTTGTATATA TERM 1718 1229117 - 1229152 + F 100 -13.5 -3.84394 | gap 1, opp_overlap 1229108 1229117 1229120, overlap 1229120 CCGAAAGCTTAATAA GAAGCTCCTGAATGGT GTGGA GCC-TTCAGGAGCTTC TTTGGGTTGTATATA TERM 1719 1229120 - 1229149 + F 83 -9.4 -4.03769 | gap 1, opp_overlap 1229108 1229117 1229120, overlap 1229117 AAAGCTTAATAAGAA GCTCCTGAATGGT GTGGA GCC-TTCAGGAGC TTCTTTGGGTTGTAT TERM 1720 1229149 - 1229120 - f 83 -9.3 -3.97741 | opp_overlap 1229120 1229117, overlap 1229108 1229117 AAAGCTTAATAAGAA GCTCCTGAATGGT GTGG AGCCTTCAGGAGC TTCTTTGGGTTGTAT Dhaf_1135 1229244 - 1230206 + | beta-lactamase domain protein Dhaf_1136 1230262 - 1230474 + | hypothetical protein Dhaf_1137 1230579 - 1231985 + | Peptidase M23 TERM 1721 1232068 - 1232082 + G 75 -7.8 -4.20768 | opp_overlap 1232068 1232067 GAGGCAGTGGATAAG CTTCCC AAG GGGGAG TTCTTTGTTGAGGAT TERM 1722 1232496 - 1232523 + G 73 -2 -5.10497 | overlap 1232502 1232515 TAACCGTGGACTATA TATTTCCCCC CGGATTAT GCGGGAGATA TTTTTTCCGTACCTT Dhaf_1138 1232014 - 1232919 + | uroporphyrinogen-III decarboxylase-like protein TERM 1723 1232994 - 1232953 - f 100 -23.3 -4.14193 | opp_overlap 1232953 AGAAGACCATAGAAA GAGGGCTGACTTTAGGATT GTCC AATCCTGAAGTCAGCCCTC TTTGGGGTGAGTAAT TERM 1724 1232953 - 1232994 + F 100 -25.5 -3.61356 | opp_overlap 1232953 AGAAGACCATAGAAA GAGGGCTGACTTTAGGATT GTCC AATCCTGAAGTCAGCCCTC TTTGGGGTGAGTAAT TERM 1725 1233422 - 1233399 - f 72 -7.6 -3.8297 | AACAAAAATGTCAAA GCTCAAATTT AGCT AAATTTAAGC AAATAGACCCGAAAT TERM 1726 1233531 - 1233480 - f 84 -3.9 -5.46276 | gap 1, opp_overlap 1233479, overlap 1233482 AATACACATAAAAAA TCCTTATAATAAGAGA-TAGGGTA GTCCT TGCCCAAATCTCAAATTATAAGGA GATTTAAAATGCAGG TERM 1727 1234663 - 1234650 - g 77 -4.5 -4.83615 | GAGTTTTTAGAAAAA CTCCG ACGA CGAAG AAGGAAAGCTGCCAA Dhaf_1140 1233540 - 1234784 + | transposase IS4 family protein TERM 1728 1235366 - 1235341 - T 100 -11.3 -5.02502 | opp_overlap 1235341 1235344 GATAGTATATAAAAA GAACTCTGAGT AATG ACTCAAAGTTC TTCATTGACGATGTA TERM 1729 1235341 - 1235366 + T 71 -9.1 -3.35371 | opp_overlap 1235341, overlap 1235344 GATAGTATATAAAAA GAACTCTGAGT AATG ACTCAAAGTTC TTCATTGACGATGTA Dhaf_1141 1235696 - 1235391 - | hypothetical protein TERM 1730 1235936 - 1235892 - H 83 -11.8 -2.8806 | overlap 1235894 AAATGTCCTGATATA TATCCTTTTGTCACCA TTTTGGTATGACT TGGTGACAAAAGGATA CAGAGGGTGATATAA TERM 1731 1235934 - 1235894 - H 73 -10 -2.98942 | overlap 1235892 ATGTCCTGATATATA TCCTTTTGTCACCA TTTTGGTATGACT TGGTGACAAAAGGA TACAGAGGGTGATAT Dhaf_1142 1236009 - 1236344 + | transcriptional regulator, XRE family TERM 1732 1237183 - 1237195 + G 85 -4.9 -5.38549 | CATAGCCTTACTGCC CATAA TGT TTATG TTTTTCTTATTTCAA Dhaf_1143 1236374 - 1237867 + | protein of unknown function DUF1538 Dhaf_1144 1237857 - 1238522 + | nitrogen regulatory protein P-II TERM 1733 1238545 - 1238587 + F 100 -21.5 -3.78934 | opp_overlap 1238547, overlap 1238547 CATAATAGGTGAACA AAGGGCTTTCCCCTGAAGC ATCAA GCTTTAGGGGAAAGCCCTA TTATTCTCAGAGCAG TERM 1734 1238585 - 1238547 - f 100 -21.9 -4.20749 | opp_overlap 1238545 1238547 TAATAGGTGAACAAA GGGCTTTCCCCTGAAGC ATCAA GCTTTAGGGGAAAGCCC TATTATTCTCAGAGC TERM 1735 1238547 - 1238585 + F 100 -24.1 -3.4811 | opp_overlap 1238547, overlap 1238545 TAATAGGTGAACAAA GGGCTTTCCCCTGAAGC ATCAA GCTTTAGGGGAAAGCCC TATTATTCTCAGAGC Dhaf_1145 1238679 - 1239122 + | transcriptional regulator, BadM/Rrf2 family TERM 1736 1239120 - 1239162 + F 100 -13.1 -3.83318 | gap 1, opp_overlap 1239124 1239128 1239131, overlap 1239125 1239128 ATCATGTACTATATC TAAAGCAACAGCCTTCTGAG CTTT TTCAGAAGGTTGTT-CTTTA TTCTCTTCTTAAAAA TERM 1737 1239125 - 1239158 + F 100 -9.7 -4.51763 | opp_overlap 1239124 1239128 1239131, overlap 1239120 1239128 GTACTATATCTAAAG CAACAGCCTTCTGAG CTTT TTCAGAAGGTTGTTC TTTATTCTCTTCTTA TERM 1738 1239155 - 1239128 - f 71 -8.5 -3.55866 | opp_overlap 1239125 1239120 1239128, overlap 1239124 1239131 CTATATCTAAAGCAA CAGCCTTCTGA GCTTTT TCAGAAGGTTG TTCTTTATTCTCTTC TERM 1739 1239128 - 1239155 + F 100 -11.4 -4.33203 | opp_overlap 1239128 1239124 1239131, overlap 1239125 1239120 CTATATCTAAAGCAA CAGCCTTCTGAG CTTT TTCAGAAGGTTG TTCTTTATTCTCTTC Dhaf_1146 1239337 - 1240626 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 1740 1240729 - 1240672 - T 77 -4.7 -5.03713 | opp_overlap 1240673 1240674, overlap 1240673 1240674 AATAAGGAAAGAAAA TTGCCCCTGTGCAAATCTGTAATGGTA GATA TACCCTTGCAGAGAGACACAGGGGCGT TCCTTATGAATTGGC TERM 1741 1240673 - 1240728 + T 80 -10.4 -3.47403 | opp_overlap 1240672 1240673 1240674, overlap 1240674 ATAAGGAAAGAAAAT TGCCCCTGTGCAAATCTGTAATGGTA GATA TACCCTTGCAGAGAGACACAGGGGCG TTCCTTATGAATTGG TERM 1742 1240728 - 1240673 - T 73 -8.2 -3.59787 | opp_overlap 1240673 1240674, overlap 1240672 1240674 ATAAGGAAAGAAAAT TGCCCCTGTGCAAATCTGTAATGGTA GATA TACCCTTGCAGAGAGACACAGGGGCG TTCCTTATGAATTGG TERM 1743 1240727 - 1240674 - T 81 -11.7 -2.74246 | opp_overlap 1240673 1240674, overlap 1240673 1240672 TAAGGAAAGAAAATT GCCCCTGTGCAAATCTGTAATGGTA GATA TACCCTTGCAGAGAGACACAGGGGC GTTCCTTATGAATTG TERM 1744 1240674 - 1240727 + T 80 -11.7 -2.6796 | opp_overlap 1240674 1240673 1240672, overlap 1240673 TAAGGAAAGAAAATT GCCCCTGTGCAAATCTGTAATGGTA GATA TACCCTTGCAGAGAGACACAGGGGC GTTCCTTATGAATTG Dhaf_1147 1241792 - 1240755 - | hypothetical protein TERM 1745 1241561 - 1241573 + g 90 -9.1 -4.59773 | opp_overlap 1241556 GAGCGGTAAACTGGA TGCCG GGG CGGCA TTTTTCCGGATAGCC TERM 1746 1241985 - 1241973 - g 100 -6.3 -5.58179 | overlap 1241966 TAGCAGAAGAAAAAA GCTTT TCC AAAGC AGCCGAAGATCTCTT TERM 1747 1242471 - 1242461 - g 76 -2.4 -5.26119 | TTGGCAAAAATAAAA GGGG TCA CCGC TCAGGATCTTGAGGA TERM 1748 1242525 - 1242510 - g 71 -9 -3.60627 | opp_overlap 1242500 1242510 GGATTCTACGGGAAA CGGGTT CCGG AACCCG TGAGTTCAGTGATCG TERM 1749 1242770 - 1242780 + G 74 -6.8 -4.47328 | opp_overlap 1242770 ACTTATTTTACGAAA GCCT CGG AGGC TTTTCTGATGGAATT Dhaf_1148 1241924 - 1242835 + | transcriptional regulator, LysR family Dhaf_1149 1242964 - 1243899 + | cysteine synthase A TERM 1750 1244046 - 1244027 - f 77 -10.8 -2.87931 | overlap 1244029 1244039 CCTACCTTTTATATA GACAAGAG GTAA CTCTTGTC AAAAGCTGAACCGTC TERM 1751 1244057 - 1244073 + F 100 -5.8 -6.01725 | TTGTCAAAAGCTGAA CCGTCT CTTCC AGGCGG TTTTTTCTTTTTATT TERM 1752 1244733 - 1244743 + G 74 -6.8 -4.37886 | overlap 1244741 GCAGGTTATTTCTTT GGCA ATC TGCC TTTTGTAAAGGATAA Dhaf_1150 1244208 - 1244882 + | SNARE associated Golgi protein TERM 1753 1244910 - 1244948 + F 100 -9.1 -5.14965 | opp_overlap 1244914, overlap 1244914 CTGCTCTGAAATAGA AGAAGGAATTAACACTG GTTAA TAGTGTTAATTCCTTTA TTTTTTCCTGAGAAT TERM 1754 1244944 - 1244914 - f 100 -11.4 -4.03586 | opp_overlap 1244910 1244914 TCTGAAATAGAAGAA GGAATTAACACT GGTTAAT AGTGTTAATTCC TTTATTTTTTCCTGA TERM 1755 1244914 - 1244944 + F 100 -12.1 -5.0917 | opp_overlap 1244914, overlap 1244910 TCTGAAATAGAAGAA GGAATTAACACTG GTTAA TAGTGTTAATTCC TTTATTTTTTCCTGA Dhaf_1151 1244983 - 1245870 + | hypothetical protein TERM 1756 1245978 - 1246015 + F 74 -9.2 -3.31726 | gap 1, opp_overlap 1245974 1245978, overlap 1245976 GCGGTAAGACAGAAA GTCCACGGCTTTCATCT CAGGA AGA-GGGCGCCGTGGAC TATTATATCAGGGGG Dhaf_1152 1246040 - 1246867 + | phospho-2-dehydro-3-deoxyheptonate aldolase Dhaf_1153 1247229 - 1246969 - | hypothetical protein Dhaf_1154 1248508 - 1247255 - | DNA-directed DNA polymerase TERM 1757 1247701 - 1247711 + g 73 -2.4 -5.08824 | GAAGAACCAGGTGAG CCTC TCT GCGG TTTTTTACATCGAAG TERM 1758 1247759 - 1247789 + g 71 -6.7 -4.1899 | gap 1 GCCCATGCCTTTGAC CGCTACCCGGCCGC CGGG GCGGACGGG-GGAG TTTTCAATGCCGTGA TERM 1759 1248230 - 1248220 - G 71 -6.8 -4.17316 | AGTCTCTTAAAATAA GGCT TAG AGCC TCGCTGCACTGACGG TERM 1760 1248679 - 1248655 - H 100 -11.6 -4.3898 | opp_overlap 1248654 1248653 1248651 ATTATTGTCATAAAA TCCCTTGAAT ACTAA ATTCAAGGGA GCTATTTGGCAGTGG TERM 1761 1249386 - 1249371 - g 71 -2.6 -4.99134 | gap 1 ACCTCAAAGGAAAAA TCG-ACA TGG TGTTCGA AACGGAAGTCGCCGA Dhaf_1155 1248842 - 1250275 + | hypothetical protein TERM 1762 1250357 - 1250327 - T 100 -12 -5.12707 | gap 1, opp_overlap 1250327 TGAAAGTTGAAAAAA GCGGCTGGTCACA ATCCAA TGTGAC-AGCCGC TTTTTCGGTTAATTT TERM 1763 1250327 - 1250357 + T 100 -12 -4.788 | gap 1, opp_overlap 1250327 TGAAAGTTGAAAAAA GCGGCTGGTCACA ATCCAA TGTGAC-AGCCGC TTTTTCGGTTAATTT Dhaf_1156 1251841 - 1250381 - | sodium/proline symporter TERM 1764 1251031 - 1251049 + g 93 -6.6 -5.38497 | opp_overlap 1251034 AAAAGACCATCCAAC TCATGCCG ATA CGGCGGGA TTTTTTGATTTCGCT TERM 1765 1252052 - 1251997 - R 79 -7 -4.66833 | gap 1, opp_overlap 1252002, overlap 1252002 TTTCAACTGGAAAAA GAAAAGCAACCTTGGTCCCACTCAA TTAATGT TTAAGTGGT-CCGTGGTTGCCTTTC AGGTTTTGAACAAGA TERM 1766 1252047 - 1252002 - R 79 -3.3 -5.27023 | gap 1, opp_overlap 1252002, overlap 1251997 ACTGGAAAAAGAAAA GCAACCTTGGTCCCACTCAA TTAATGT TTAAGTGGT-CCGTGGTTGC CTTTCAGGTTTTGAA Dhaf_1157 1252437 - 1252084 - | monovalent cation/proton antiporter, MnhG/PhaG subunit Dhaf_1158 1252711 - 1252415 - | multiple resistance and pH regulation protein F Dhaf_1159 1253187 - 1252708 - | cation antiporter Dhaf_1160 1254704 - 1253217 - | NADH dehydrogenase (quinone) TERM 1767 1253302 - 1253287 - G 71 -9 -3.53012 | overlap 1253253 CCCGCTGCCGCTAAA TCCACG ACCC CGTGGA GACCTTCTGCTCCCA TERM 1768 1253360 - 1253381 + g 71 -4.3 -4.82855 | GCAGGGCGATGGGAA GGAGCAGCC CTTT GGTGGTTCC TTTTTCCGTTTCCTC Dhaf_1161 1255023 - 1254697 - | NADH-ubiquinone oxidoreductase chain 4L Dhaf_1162 1255461 - 1255036 - | Na+/H+ antiporter MnhB subunit-related protein Dhaf_1163 1257835 - 1255463 - | monovalent cation/H+ antiporter, subunit 1 TERM 1769 1256034 - 1256004 - G 77 -8.8 -4.14392 | TGGGAAGGGTCAAAA GCGATCCCCTGGGC CAG GACCAGGGCTCCGC CCACCGCTACCACGA TERM 1770 1257344 - 1257322 - G 75 -5.7 -4.59853 | gap 1 CCAAGCCGCCAAAAA CCGT-AATCA ACAG TGATTTACGG GCACCGGAGCGGGAC Dhaf_1164 1257963 - 1258646 + | UspA domain protein TERM 1771 1258660 - 1258679 + T 100 -12.2 -5.0925 | GACCCCTGGTATACG CTCCACTG GCAA CAGTGGAG TTTTTGCTTTTCAAC Dhaf_1165 1259259 - 1258696 - | integrase family protein TERM 1772 1258934 - 1258944 + g 79 -3.2 -5.22039 | TGCTGACGGGTAATG GGCA GGT TGTC TTTTTTGGATTTAAA TERM 1773 1259407 - 1259387 - H 73 -9.7 -2.91681 | GTTGAAGGTTATAGA GGATGAAGC AAG GCATCATCC CATCGATAAGGAGTG Dhaf_1166 1259429 - 1261342 + | carbon-monoxide dehydrogenase, catalytic subunit TERM 1774 1261353 - 1261380 + F 100 -14.8 -4.11216 | opp_overlap 1261357, overlap 1261356 1261357 ATTAAGAAGAGTTCA GAGACGCCGGCC AATA GGCCGGCGCTTC TTTTGGGCATGGAAA TERM 1775 1261356 - 1261377 + F 100 -12.9 -4.18506 | opp_overlap 1261357, overlap 1261353 1261357 AAGAAGAGTTCAGAG ACGCCGGCC AATA GGCCGGCGC TTCTTTTGGGCATGG TERM 1776 1261376 - 1261357 - f 100 -16.4 -2.92003 | opp_overlap 1261356 1261353 1261357 AGAAGAGTTCAGAGA CGCCGGCC AATA GGCCGGCG CTTCTTTTGGGCATG TERM 1777 1261357 - 1261376 + F 100 -16.4 -3.10622 | opp_overlap 1261357, overlap 1261356 1261353 AGAAGAGTTCAGAGA CGCCGGCC AATA GGCCGGCG CTTCTTTTGGGCATG TERM 1778 1261673 - 1261663 - g 70 -2.4 -4.85599 | opp_overlap 1261663 1261671 GCGACGTTATAAAAA GGGC CAG GTCC TTTTCTTCGAAGGGG TERM 1779 1261663 - 1261673 + G 71 -4.6 -4.63218 | opp_overlap 1261663, overlap 1261671 GCGACGTTATAAAAA GGGC CAG GTCC TTTTCTTCGAAGGGG Dhaf_1167 1261520 - 1262239 + | transcriptional regulator, Crp/Fnr family TERM 1780 1262289 - 1262318 + F 84 -2.7 -5.61689 | AAAAATTTTCAAGCA GTGCTGTGATTCC AAGG GGAAGGGCGGCGC TTTTTTGTTGCTTTT TERM 1781 1262513 - 1262495 - g 82 -5.3 -5.00884 | opp_overlap 1262495 ATGCTGGTCAAAAAA TTGGCGA TATTG TCACCAA GTTTCCCAAGGCGGC Dhaf_1168 1262467 - 1263165 + | protein of unknown function DUF542 ScdA domain protein Dhaf_1169 1263202 - 1263417 + | hypothetical protein TERM 1782 1263450 - 1263483 + F 100 -3.8 -5.92399 | overlap 1263455 TAAGGGAAATGGACT ATAGGGTCACGGGC TATTAT GTCCGTGACTTTGC TTTTTTGTTTTATTA TERM 1783 1263455 - 1263478 + F 100 -10.3 -4.53334 | overlap 1263450 GAAATGGACTATAGG GTCACGGGC TATTAT GTCCGTGAC TTTGCTTTTTTGTTT TERM 1784 1263559 - 1263526 - f 93 -12.4 -3.22656 | opp_overlap 1263526 AATGTAATTCAGCAA GCCACGGTATCCTC GAGCAG GAGGAGTCCGTGGC TTTATTTATTTGACG TERM 1785 1263526 - 1263559 + F 100 -12.4 -4.78326 | opp_overlap 1263526 AATGTAATTCAGCAA GCCACGGTATCCTC GAGCAG GAGGAGTCCGTGGC TTTATTTATTTGACG Dhaf_1170 1263592 - 1264845 + | major facilitator superfamily MFS_1 TERM 1786 1264860 - 1264849 - T 73 -3.6 -4.99134 | ATGGCAAAGTAAAAA GCGC TGAC GCAC TGAACAAGGAATAGG TERM 1787 1264945 - 1264893 - T 100 -21.7 -4.84527 | gap 1, opp_overlap 1264893 TTCACAGATCAAAAA TTCGGCCGTTTTG-GATTGACTCA TCTAGC TGAGTCGATCTCAAAACGGCCGAA TTTTCATTTAGTCCA TERM 1788 1264893 - 1264945 + T 100 -23.9 -4.58773 | gap 1, opp_overlap 1264893 TTCACAGATCAAAAA TTCGGCCGTTTTG-GATTGACTCA TCTAGC TGAGTCGATCTCAAAACGGCCGAA TTTTCATTTAGTCCA TERM 1789 1264996 - 1264978 - T 71 -3.2 -5.03994 | CTTGAGAGAGAAAAA GTAAATTA GTG CAACTTAC GGATTTCTTCTTCGG Dhaf_1171 1265273 - 1264983 - | hypothetical protein TERM 1790 1266236 - 1266249 + r 82 -2.3 -5.64006 | ATGCTTACGCTATGA GTGGG TTAG TCCGC TTTTTTTACTTCAAT Dhaf_1173 1267131 - 1266241 - | 2-hydroxy-3-oxopropionate reductase TERM 1791 1266298 - 1266326 + g 100 -11.2 -4.64766 | gap 1, opp_overlap 1266296 1266291 ATACTGAACTAAGGC GCTATGATCCTGG TGAT CCAG-ATCATAGC TTTTTAAAGTCTGCA TERM 1792 1267416 - 1267430 + r 80 -10 -3.72576 | opp_overlap 1267416 CCGCCTTGAGCGAAA CTGTCC ACC GGACAG TTTCGTCGCCAAACC TERM 1793 1267430 - 1267416 - R 80 -10 -3.64703 | opp_overlap 1267416 CCGCCTTGAGCGAAA CTGTCC ACC GGACAG TTTCGTCGCCAAACC TERM 1794 1267582 - 1267600 + r 86 -10.2 -3.79113 | overlap 1267597 TCAGTTATTCCTTGG GGCCCTGA GTA TCCGGGCC TTCTTGTGAGGGACT TERM 1795 1267925 - 1267901 - R 100 -13.7 -3.89346 | CCTGCAGCGGAGAAA GGTTGGAAACA GGA CGTTTCCAACC CGCCATTGAGAACAA TERM 1796 1268005 - 1267983 - R 75 -9.1 -3.72695 | ATTTGGCGGACGAAA CCCGGGCGA GGGTT TCGCCCAAG CCGCCACGCCACAGA Dhaf_1174 1268940 - 1268152 - | hydroxypyruvate isomerase Dhaf_1175 1270746 - 1268971 - | Acetolactate synthase TERM 1797 1269222 - 1269238 + g 71 -6.5 -4.30576 | opp_overlap 1269221 1269234, overlap 1269223 CGGTGGAAATACAGC GCTGCTC AAA GAGCAGA TTTTGCTGCTGACGG TERM 1798 1269223 - 1269237 + g 70 -10 -3.18024 | opp_overlap 1269221 1269234, overlap 1269222 GGTGGAAATACAGCG CTGCTC AAA GAGCAG ATTTTGCTGCTGACG TERM 1799 1269497 - 1269483 - G 73 -5.6 -4.59109 | overlap 1269484 CATAGGCTTCAAAAA GCTGGG TAG CCCAGA TCTGGCTGATGCCGC TERM 1800 1271209 - 1271236 + r 100 -17.1 -4.21275 | opp_overlap 1271209 ACAGTGTAAAAAAAA CTGCTTCCGGC CATGGT GCCGGAAGCAG TTTTCAATAAATTCA TERM 1801 1271236 - 1271209 - R 100 -17.1 -5.79526 | opp_overlap 1271209 ACAGTGTAAAAAAAA CTGCTTCCGGC CATGGT GCCGGAAGCAG TTTTCAATAAATTCA Dhaf_1176 1272665 - 1271271 - | permease for cytosine/purines uracil thiamine allantoin Dhaf_1177 1274064 - 1272715 - | allantoinase Dhaf_1178 1275462 - 1274104 - | allantoinase TERM 1802 1274931 - 1274962 + g 75 -10.2 -3.38046 | overlap 1274929 AGTGGAAGCCTGCCC GGCCATCGAACTCT TTGC AGATTTCCATGGCC TCTTTGGCCTGGCCG Dhaf_1179 1275926 - 1277155 + | amidase, hydantoinase/carbamoylase family Dhaf_1180 1277176 - 1277637 + | Endoribonuclease L-PSP TERM 1803 1277655 - 1277709 + F 87 -8.6 -4.54477 | gap 1, opp_overlap 1277655 1277660 1277661 1277664, overlap 1277657 1277662 1277663 1277666 ATTAGGAAAAGATAA GATAAGGCAGAGCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGCTCC-CTTCTTC TTTTATCACTTTTGG TERM 1804 1277657 - 1277706 + F 100 -10.9 -4.35693 | gap 2, opp_overlap 1277655 1277660 1277661 1277664, overlap 1277655 1277662 1277663 1277666 TAGGAAAAGATAAGA TAAGGCAGAGCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGCTC--CCTTC TTCTTTTATCACTTT TERM 1805 1277703 - 1277660 - f 75 -8.2 -3.89611 | gap 2, opp_overlap 1277657 1277655 1277662 1277663 1277666, overlap 1277655 1277661 1277664 GAAAAGATAAGATAA GGCAGAGCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGCTC--CC TTCTTCTTTTATCAC TERM 1806 1277703 - 1277661 - f 76 -10.6 -2.9214 | gap 1, opp_overlap 1277657 1277655 1277662 1277663 1277666, overlap 1277660 1277655 1277664 AAAAGATAAGATAAG GCAGAGCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGCTCC-C TTCTTCTTTTATCAC TERM 1807 1277662 - 1277703 + F 100 -13 -4.26938 | opp_overlap 1277660 1277661 1277655 1277664, overlap 1277657 1277655 1277663 1277666 AAAGATAAGATAAGG CAGAGCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGCTCCC TTCTTCTTTTATCAC TERM 1808 1277663 - 1277702 + F 100 -16.5 -3.15078 | opp_overlap 1277660 1277661 1277655 1277664, overlap 1277662 1277657 1277655 1277666 AAGATAAGATAAGGC AGAGCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGCTCC CTTCTTCTTTTATCA TERM 1809 1277701 - 1277664 - f 100 -15.6 -2.68114 | opp_overlap 1277663 1277662 1277657 1277655 1277666, overlap 1277660 1277661 1277655 AGATAAGATAAGGCA GAGCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGCTC CCTTCTTCTTTTATC TERM 1810 1277666 - 1277699 + F 100 -16.8 -2.75297 | opp_overlap 1277664 1277660 1277661 1277655, overlap 1277663 1277662 1277657 1277655 ATAAGATAAGGCAGA GCGTGAGGCGGTCC GGGCAG GGATCGTCTCACGC TCCCTTCTTCTTTTA TERM 1811 1278458 - 1278468 + G 73 -5.4 -4.63218 | AGCTTTTTGCCGGGA GGAT GCC ATCC TTTTATTGAGACCCA Dhaf_1181 1277912 - 1278673 + | Cupin 2 conserved barrel domain protein TERM 1812 1279805 - 1279794 - g 85 -7.2 -4.87665 | opp_overlap 1279793 CGGGAGTCATAAAAA CCCG CACC CGGG ACTTCATTATCGGCA TERM 1813 1280057 - 1280067 + G 77 -6.8 -4.62471 | overlap 1280047 ATCAGCAATGAGAGC GCCA TTG TGGC TTTTTCGGAGTTAGG Dhaf_1182 1278731 - 1280398 + | transcriptional regulator, CdaR TERM 1814 1280481 - 1280452 - f 100 -11.5 -4.30719 | opp_overlap 1280451 1280453 1280454 1280456, overlap 1280453 1280454 TTGTGCTATAATAAA GCTACAGGTGGAG TAAT CTCCACCTGTAAT GTTATGCACTAGGCA TERM 1815 1280453 - 1280480 + F 95 -12.8 -3.23393 | opp_overlap 1280452 1280453 1280454, overlap 1280451 1280454 1280456 TGTGCTATAATAAAG CTACAGGTGGAG TAAT CTCCACCTGTAA TGTTATGCACTAGGC TERM 1816 1280480 - 1280453 - f 100 -15 -3.1811 | opp_overlap 1280453 1280451 1280454 1280456, overlap 1280452 1280454 TGTGCTATAATAAAG CTACAGGTGGAG TAAT CTCCACCTGTAA TGTTATGCACTAGGC TERM 1817 1280454 - 1280479 + F 100 -16.3 -2.53822 | opp_overlap 1280453 1280452 1280454, overlap 1280453 1280451 1280456 GTGCTATAATAAAGC TACAGGTGGAG TAAT CTCCACCTGTA ATGTTATGCACTAGG TERM 1818 1280479 - 1280454 - f 100 -16.3 -2.50545 | opp_overlap 1280454 1280453 1280451 1280456, overlap 1280453 1280452 GTGCTATAATAAAGC TACAGGTGGAG TAAT CTCCACCTGTA ATGTTATGCACTAGG TERM 1819 1280456 - 1280477 + F 100 -14.5 -2.8055 | opp_overlap 1280454 1280453 1280452, overlap 1280454 1280453 1280451 GCTATAATAAAGCTA CAGGTGGAG TAAT CTCCACCTG TAATGTTATGCACTA Dhaf_1183 1280524 - 1281051 + | nitroreductase Dhaf_1184 1281051 - 1281383 + | protein of unknown function UPF0060 TERM 1820 1281441 - 1281474 + F 100 -17.7 -5.95539 | opp_overlap 1281445 ACTATGCTGATTTCA GATATCGACAAGGAG ACTC TTCCTTGTCGATATC TTTTTTTGTTTAGAG TERM 1821 1281470 - 1281445 - f 83 -12 -2.89564 | opp_overlap 1281441 TGCTGATTTCAGATA TCGACAAGGA GACTCT TCCTTGTCGA TATCTTTTTTTGTTT Dhaf_1185 1281553 - 1282287 + | polysaccharide deacetylase Dhaf_1186 1282360 - 1283001 + | hypothetical protein TERM 1822 1283031 - 1283060 + F 100 -11.5 -4.52589 | opp_overlap 1283031, overlap 1283025 GGGAAGCCCGATCAA GACCGATCTTTAC TTGA GGAAGGATCGGTC TTTTCTGTCGAAAAA TERM 1823 1283060 - 1283031 - f 72 -9.3 -3.16742 | opp_overlap 1283025 1283031 GGGAAGCCCGATCAA GACCGATCTTTAC TTGA GGAAGGATCGGTC TTTTCTGTCGAAAAA Dhaf_1187 1283136 - 1284326 + | beta-lactamase domain protein TERM 1824 1284358 - 1284396 + T 100 -14.8 -5.8096 | opp_overlap 1284352 1284358 CTCCGGAAATAGTAA TCCCCCTGGATTGA CTCTTGTCTGC TCAATCCAGGGGGA TTTTTGTTTTTTATG TERM 1825 1284396 - 1284358 - T 100 -14.8 -3.45571 | opp_overlap 1284358, overlap 1284352 CTCCGGAAATAGTAA TCCCCCTGGATTGA CTCTTGTCTGC TCAATCCAGGGGGA TTTTTGTTTTTTATG Dhaf_1188 1285071 - 1284427 - | channel protein, hemolysin III family Dhaf_1189 1286918 - 1285182 - | arsenite-activated ATPase ArsA TERM 1826 1285831 - 1285854 + g 74 -3.8 -5.00616 | TTAAGATGGGCTGCC GGGTCAGTTG TGGT CAAATGAACC TTTTTTCCACGAGCA TERM 1827 1286565 - 1286595 + g 71 -4.7 -4.58395 | overlap 1286567 CGCCGCAATCTCTAC TGTGCAGGAACCG GAAAG CTGTTCCTCCATA TTTTTGAGCACTGCC TERM 1828 1286819 - 1286842 + g 81 -8 -4.56597 | opp_overlap 1286819 TGTCGGCTAAATTTA CCGCCGTGGC ACAG GCCGTGGAGG TTTTTCCCACGCCGC TERM 1829 1287005 - 1286991 - R 70 -7.1 -3.89226 | opp_overlap 1286993 GAGATAAAAAGAAGA GAGGG GCAGT CCCTC ATATAGCTAAAGTCA Dhaf_1190 1287438 - 1287049 - | Arsenical resistance operon trans-acting repressor ArsD Dhaf_1191 1287788 - 1287471 - | transcriptional regulator, ArsR family Dhaf_1192 1288017 - 1288949 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein Dhaf_1193 1288984 - 1290477 + | histidine kinase Dhaf_1194 1290461 - 1291114 + | two component transcriptional regulator, LuxR family TERM 1830 1291118 - 1291150 + F 100 -17.9 -5.252 | opp_overlap 1291118 1291136 GGAATTATATAAAAA TAATCGCTGTCGGGG AAA TCCTGACAGCGATTA TTTTTTGTCAGGATA TERM 1831 1291150 - 1291118 - f 100 -15 -5.04175 | opp_overlap 1291118, overlap 1291136 GGAATTATATAAAAA TAATCGCTGTCGGG GAAAT CCTGACAGCGATTA TTTTTTGTCAGGATA Dhaf_1195 1291271 - 1291864 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1832 1292641 - 1292659 + G 74 -9.5 -3.5616 | CTCTCGATTTCTTCC CTGGCCC GGAAA GGGCCGG TTATCAATTTTTCAG TERM 1833 1292686 - 1292696 + G 71 -6.8 -4.2461 | TCAGCAATTCTCGTG GTGC TCA GCAC TTTATTAATGAGAAT Dhaf_1196 1291864 - 1292910 + | Polysulphide reductase NrfD TERM 1834 1294937 - 1294922 - g 73 -4.6 -4.72846 | opp_overlap 1294922, overlap 1294924 TGATATAGCTAAAAA GATGGG GTTC CCCAAC TTTGGCGATAATGGC Dhaf_1197 1292910 - 1295714 + | molybdopterin oxidoreductase TERM 1835 1295795 - 1295759 - f 91 -10.2 -4.14615 | gap 1, opp_overlap 1295749, overlap 1295760 1295762 AAAAAGGGTTGAAAA TGAGTGGATGGTGCAGG AATT CCTGCACCAT-CGCTCC AATCCATATCCATGG TERM 1836 1295794 - 1295760 - f 100 -13.7 -3.07685 | gap 1, opp_overlap 1295749, overlap 1295759 1295762 AAAAGGGTTGAAAAT GAGTGGATGGTGCAGG AATT CCTGCACCAT-CGCTC CAATCCATATCCATG TERM 1837 1295794 - 1295762 - f 95 -12.8 -3.08776 | gap 1, opp_overlap 1295749, overlap 1295760 1295759 AAGGGTTGAAAATGA GTG-GATGGTGCAGG AATT CCTGCACCATCGCTC CAATCCATATCCATG TERM 1838 1295799 - 1295810 + F 78 -4.4 -5.19879 | opp_overlap 1295802, overlap 1295749 CACCATCGCTCCAAT CCAT ATCC ATGG TTTTTATCTTTCAAA TERM 1839 1296455 - 1296445 - g 73 -2.4 -5.01732 | opp_overlap 1296432 AACCTGGTGAAAAAA GCGG ACA CCGG GTACTATCAAGGGTG Dhaf_1198 1295872 - 1296543 + | anaerobic dehydrogenase protein-like protein TERM 1840 1296557 - 1296576 + T 88 -9.3 -4.3739 | opp_overlap 1296557 AGCTTGTAAGTAAAA GGAGACC CACTTA GGTCTCC TTTTATCAAGAAGTG TERM 1841 1296576 - 1296557 - T 93 -10 -4.41047 | opp_overlap 1296557 AGCTTGTAAGTAAAA GGAGACCC ACTT AGGTCTCC TTTTATCAAGAAGTG Dhaf_1199 1297096 - 1296614 - | C_GCAxxG_C_C family protein TERM 1842 1296888 - 1296876 - G 71 -9.1 -3.53091 | ATGCCTCCCGCTAAA GCACC ACA GGTGC ACCCTGATCCCCCCA Dhaf_1200 1297251 - 1297547 + | transcriptional regulator, ArsR family TERM 1843 1297993 - 1298013 + G 71 -4.7 -4.56775 | opp_overlap 1297993, overlap 1297995 GAAAATCAAAGGAAA TCCGGTATT GAG AATGCCGAA TTTTTAAAGGGACAT Dhaf_1201 1297624 - 1298436 + | Methyltransferase type 11 Dhaf_1202 1298471 - 1298896 + | BFD domain protein (2Fe-2S)-binding domain protein Dhaf_1203 1299063 - 1300052 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 1844 1300569 - 1300589 + GF 72 -6.1 -4.26079 | TATACGGAGTTTTAC TTGGAGCAG TTG CAGCTCTAA TTTTAAGTACTTTAA TERM 1845 1301161 - 1301140 - gf 73 -2.3 -5.12474 | TATAACAGAGAAAAA GAAAACTTC TATG GAAATTATC CGAAAAAATCGTGAA Dhaf_1204 1300049 - 1302388 + | multi-sensor signal transduction histidine kinase Dhaf_1205 1302357 - 1302995 + | two component transcriptional regulator, LuxR family Dhaf_1206 1303190 - 1303771 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1846 1304071 - 1304089 + G 74 -6.7 -4.386 | CAGTCCCCTATGTCT TGGGGAG GATGG CTCCTCA TTTTGTACGGAATTA Dhaf_1207 1303786 - 1304703 + | Polysulphide reductase NrfD TERM 1847 1306789 - 1306762 - g 78 -5.6 -4.93296 | opp_overlap 1306764, overlap 1306764 TGACCATGAGAAAAA GACAGTAAAAGG TGAA CCTGTTACTGTT GATTGGATGCGTAAC TERM 1848 1306787 - 1306764 - g 76 -8.2 -4.08644 | opp_overlap 1306764, overlap 1306762 ACCATGAGAAAAAGA CAGTAAAAGG TGAA CCTGTTACTG TTGATTGGATGCGTA Dhaf_1208 1304750 - 1307593 + | molybdopterin oxidoreductase Dhaf_1209 1307666 - 1308355 + | cytoplasmic chaperone TorD family protein Dhaf_1210 1308555 - 1308989 + | arsenate reductase (thioredoxin) Dhaf_1211 1309019 - 1309372 + | transcriptional regulator, ArsR family TERM 1849 1310171 - 1310189 + G 76 -2.3 -5.26918 | AGTAATTTACTTTTT GGTGATG TTTTT CGTCTCC TTTTTTATGAGCTAT Dhaf_1212 1309362 - 1310432 + | arsenical-resistance protein TERM 1850 1310491 - 1310527 + F 83 -8.8 -4.13591 | gap 2, opp_overlap 1310490, overlap 1310494 1310499 TTCTTAATCATAGAC GG-GGATG-TCGCACACC GCT GGTGTGCGTTCATCTTCC TTTCTGTGGTATTGA TERM 1851 1310494 - 1310523 + F 90 -11.5 -3.66365 | gap 1, opp_overlap 1310490, overlap 1310491 1310499 TTAATCATAGACGGG GATG-TCGCACACC GCT GGTGTGCGTTCATC TTCCTTTCTGTGGTA TERM 1852 1310499 - 1310517 + F 100 -14.6 -3.44936 | opp_overlap 1310490, overlap 1310494 1310491 CATAGACGGGGATGT CGCACACC GCT GGTGTGCG TTCATCTTCCTTTCT Dhaf_1213 1310667 - 1311491 + | hypothetical protein TERM 1853 1311524 - 1311563 + F 100 -25.2 -5.24449 | opp_overlap 1311524 GAAGAGAGAAGGAAA GCCCCTTGCTCCGAATCC TATT GCATTCGGAGCAAGGGGC TTTTTTCAATTTGTC TERM 1854 1311563 - 1311524 - f 100 -25.2 -4.07968 | opp_overlap 1311524 GAAGAGAGAAGGAAA GCCCCTTGCTCCGAATCC TATT GCATTCGGAGCAAGGGGC TTTTTTCAATTTGTC Dhaf_1215 1312420 - 1312959 + | hypothetical protein TERM 1855 1312986 - 1313019 + F 82 -4.5 -5.37865 | opp_overlap 1312987 1312989, overlap 1312987 1312990 TGCCTCCTTAATCAT AGACGCCTCCTGT ACATAACC GCAGGAGGCATCG TTTTTTAGTTATTGA TERM 1856 1313018 - 1312987 - f 70 -9.5 -2.90075 | opp_overlap 1312987 1312986 1312990, overlap 1312989 GCCTCCTTAATCATA GACGCCTCCTG TACATAACCG CAGGAGGCATC GTTTTTTAGTTATTG TERM 1857 1312987 - 1313018 + F 72 -8 -3.81092 | opp_overlap 1312987 1312989, overlap 1312986 1312990 GCCTCCTTAATCATA GACGCCTCCTGT ACATAACC GCAGGAGGCATC GTTTTTTAGTTATTG Dhaf_1216 1313166 - 1313486 + | transcriptional regulator, ArsR family Dhaf_1217 1313541 - 1314080 + | Thioredoxin domain protein Dhaf_1218 1314080 - 1314781 + | cytochrome c biogenesis protein transmembrane region Dhaf_1219 1314900 - 1316054 + | cysteine desulfurase family protein Dhaf_1220 1316090 - 1316350 + | hypothetical protein TERM 1858 1316404 - 1316374 - T 95 -14.2 -2.68532 | opp_overlap 1316379, overlap 1316379 TGTAAACGGATATGA GAAAAGAGACCG TACACAC CGGTCTCTTTTC AGTAAAGGCTATGAC TERM 1859 1316379 - 1316399 + T 79 -8.3 -4.18197 | opp_overlap 1316379 1316374 ACGGATATGAGAAAA GAGACCG TACACAC CGGTCTC TTTTCAGTAAAGGCT TERM 1860 1316399 - 1316379 - T 87 -8.3 -4.51378 | opp_overlap 1316379, overlap 1316374 ACGGATATGAGAAAA GAGACCG TACACAC CGGTCTC TTTTCAGTAAAGGCT Dhaf_1221 1316678 - 1316448 - | redox-active disulfide protein 2 Dhaf_1222 1316825 - 1316712 - | hypothetical protein Dhaf_1223 1317852 - 1316848 - | permease Dhaf_1224 1318249 - 1317893 - | transcriptional regulator, ArsR family TERM 1861 1318434 - 1318405 - R 100 -15.1 -3.72141 | opp_overlap 1318407 1318413, overlap 1318413 ATAGTCATATGCAAA GACCGAAACGGGT AAGT ACTCGTTTCGGTC TTAAGGTTACAATTA TERM 1862 1318407 - 1318432 + r 100 -14.1 -3.09671 | opp_overlap 1318405 1318413, overlap 1318413 AGTCATATGCAAAGA CCGAAACGGGT AAGT ACTCGTTTCGG TCTTAAGGTTACAAT Dhaf_1225 1319372 - 1318518 - | Rhodanese domain protein TERM 1863 1319562 - 1319593 + r 74 -10.4 -2.68493 | gap 1, opp_overlap 1319566, overlap 1319561 1319566 ATTTCTGCATTGCCT GAAACACCAA-GGAT TAT ATTCATTGGTGTTTC CTCTTTAATCGTAGA TERM 1864 1319607 - 1319637 + r 100 -7.6 -5.3798 | gap 1, overlap 1319609 1319620 TCCTCTTTAATCGTA GA-CGCCCCCTGT ATAACC ACAGGAGGCGTTC TTTTTGTTGTTATTA TERM 1865 1319609 - 1319634 + r 100 -10.4 -4.72127 | overlap 1319607 1319620 CTCTTTAATCGTAGA CGCCCCCTGT ATAACC ACAGGAGGCG TTCTTTTTGTTGTTA Dhaf_1226 1320241 - 1319654 - | cytoplasmic chaperone TorD family protein TERM 1866 1320275 - 1320306 + r 100 -16.6 -4.28994 | opp_overlap 1320282, overlap 1320276 AAGTAAACGAGTATT TAGCAAACGGGCCG TAGT CGGCCCGTTTGCAG TTTTGATGAATAGTA TERM 1867 1320276 - 1320305 + r 100 -17.9 -3.16914 | opp_overlap 1320282, overlap 1320275 AGTAAACGAGTATTT AGCAAACGGGCCG TAGT CGGCCCGTTTGCA GTTTTGATGAATAGT TERM 1868 1320299 - 1320282 - R 100 -14.1 -3.77196 | opp_overlap 1320276 1320275 CGAGTATTTAGCAAA CGGGCCG TAGT CGGCCCG TTTGCAGTTTTGATG Dhaf_1227 1321016 - 1320330 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1228 1323574 - 1321043 - | molybdopterin oxidoreductase TERM 1869 1321834 - 1321850 + g 77 -6.5 -4.63527 | overlap 1321827 GAGTTTTACCGGTTT CGGGGTC TTT GACTTCG TTTTTAAAATAGTCC TERM 1870 1322627 - 1322641 + g 71 -5 -4.65895 | ATTCCACCACTTGAC TATGCC AGA GGTATA TTTTTCAGTAAAGGA TERM 1871 1322664 - 1322677 + g 73 -2.3 -5.01732 | GTAAAGGATTCTTCA GGAAC TATT GCTCC TTTTTTAAAGAGATT TERM 1872 1323008 - 1323022 + g 73 -10 -3.29511 | opp_overlap 1323005 1323003 TTCCGTATAATAGGG GCCGAA TTT TTCGGC TTCTGCACAGATGGA Dhaf_1229 1324613 - 1323699 - | Polysulphide reductase NrfD TERM 1873 1324716 - 1324699 - R 84 -11.3 -3.07947 | overlap 1324690 TAAGAACCCCGAAGA GTCAGGG AATT CCCTGAC CATAAAATAGGGCAG TERM 1874 1324828 - 1324805 - R 100 -13.2 -6.38492 | opp_overlap 1324808 AGTAATAAAAAAAAA CGAATAGGGG AAAA CCCCTACTCG TTAAAGTATAAATTA Dhaf_1230 1325518 - 1324871 - | two component transcriptional regulator, LuxR family Dhaf_1231 1326971 - 1325523 - | histidine kinase Dhaf_1232 1327936 - 1326971 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 1875 1327272 - 1327248 - G 73 -8.6 -3.84266 | opp_overlap 1327248, overlap 1327249 AGATCGTAGATTAAA CTGTCCACGG CAGCC CCATGGACAA GTCCTTCGGCAACGG TERM 1876 1328522 - 1328536 + G 71 -2.8 -4.9218 | TAGGAATCGGCCTGA TGGTTC TGG GAGTCA TTTTTCTCCTGGATC Dhaf_1233 1328182 - 1328640 + | phage shock protein C, PspC Dhaf_1234 1328642 - 1329604 + | hypothetical protein TERM 1877 1329671 - 1329638 - T 100 -21.8 -4.93296 | opp_overlap 1329640 GGATGAGCAGAAAAA CACCCCGCTCCCGG GCTGGA CCAGGAGCGGGGTG TTGAGCAGCTTGGGC TERM 1878 1329640 - 1329669 + T 100 -16.4 -3.03159 | opp_overlap 1329638 ATGAGCAGAAAAACA CCCCGCTCCCGG GCTGGA CCAGGAGCGGGG TGTTGAGCAGCTTGG Dhaf_1235 1330552 - 1329722 - | S-adenosylmethionine decarboxylase proenzyme Dhaf_1236 1330837 - 1331433 + | Superoxide dismutase TERM 1879 1331518 - 1331466 - f 79 -8.6 -4.15577 | gap 1, opp_overlap 1331473, overlap 1331473 GCAAGAATTAAAGAA GCTTAAACAGGCTGTGG-AAACGAT ACGT ATCGTTTTCCACAGCCTGTTTTTTT AACCATAACTTAACC TERM 1880 1331473 - 1331511 + F 100 -19.9 -5.42259 | gap 1, opp_overlap 1331466 1331473 TTAAAGAAGCTTAAA CAGGCTGTGG-AAACGAT ACGT ATCGTTTTCCACAGCCTG TTTTTTTAACCATAA TERM 1881 1331511 - 1331473 - f 100 -19.9 -3.74238 | gap 1, opp_overlap 1331473, overlap 1331466 TTAAAGAAGCTTAAA CAGGCTGTGG-AAACGAT ACGT ATCGTTTTCCACAGCCTG TTTTTTTAACCATAA TERM 1882 1331845 - 1331830 - g 85 -4.6 -5.40474 | overlap 1331843 ACGTGTGTAAAAAAA TCCGGG GGAA CCAGGA GACGGCGAACATCCC Dhaf_1237 1331631 - 1332335 + | two component transcriptional regulator, winged helix family Dhaf_1238 1332352 - 1333011 + | phosphate uptake regulator, PhoU TERM 1883 1333171 - 1333154 - T 70 -5.5 -4.42806 | overlap 1333156 CCAGTGGTAAACAAA GACCGCT GATA AGCGGTG GGAGGAAGATTCTTC TERM 1884 1333169 - 1333156 - T 72 -8.1 -3.81958 | overlap 1333154 AGTGGTAAACAAAGA CCGCT GATA AGCGG TGGGAGGAAGATTCT Dhaf_1239 1333963 - 1333286 - | response regulator receiver and unknown domain protein Dhaf_1240 1335560 - 1333935 - | signal transduction histidine kinase regulating citrate/malate metabolism TERM 1885 1335406 - 1335431 + gH 80 -10.5 -3.43246 | opp_overlap 1335406, overlap 1335408 ATATTGACAGATACA TGGGAAGCGAT TTCA ATCGCTTCCTG TTCAATTCTTTTTTC TERM 1886 1335408 - 1335429 + gH 100 -13.1 -3.25449 | opp_overlap 1335406, overlap 1335406 ATTGACAGATACATG GGAAGCGAT TTCA ATCGCTTCC TGTTCAATTCTTTTT TERM 1887 1335592 - 1335622 + H 74 -9.8 -3.14944 | opp_overlap 1335601 1335602 1335618 CGTTTAAGGATACTT CACCATTAACTCCA TAA TGGAATTAATGGGG TTCCCTGTGATGCTA Dhaf_1241 1336030 - 1337187 + | TRAP dicarboxylate transporter- DctP subunit TERM 1888 1337724 - 1337734 + G 76 -8.2 -4.09685 | opp_overlap 1337723 CAACCTTTACGCAAT GGGC TCC GCCC TTTTACCCGCTGAAA Dhaf_1242 1337240 - 1337845 + | Tripartite ATP-independent periplasmic transporter DctQ component Dhaf_1243 1337849 - 1339168 + | TRAP dicarboxylate transporter, DctM subunit Dhaf_1244 1339202 - 1340095 + | acetaldehyde dehydrogenase (acetylating) TERM 1889 1340214 - 1340187 - g 71 -6.3 -4.14739 | opp_overlap 1340187 GCAGCCATGCCAAAA GCCATCAGTTC ACACCG GAACAAATGGC TGTTCTGGCTGAACA Dhaf_1245 1340132 - 1341133 + | 4-hydroxy-2-oxovalerate aldolase TERM 1890 1341165 - 1341219 + F 79 -7.9 -4.3467 | gap 1, opp_overlap 1341165 1341168 ACTTATATCTGGAAA CAGGGCTGCCGGCGA-AGCCATATTT GATT AAATCAGGTTGTTTGCGGCAGCCCTG TTTTCATGTCGGACT Dhaf_1246 1341270 - 1343660 + | pyruvate formate-lyase Dhaf_1247 1343684 - 1344583 + | glycyl-radical enzyme activating protein family TERM 1891 1344633 - 1344683 + F 100 -12.8 -5.45652 | AGCATAAATAGTCGG TCTCAGTTATGTATGCCAGGTT CAGGCAA AGCCGGCCATACATGACTGAGA TTTTTTATTGAGCCT TERM 1892 1344735 - 1344723 - f 76 -7.7 -4.16842 | TTTATTCGCAATAAA CCAAG AGG CTTGG ACTACTCCCGCGTTT Dhaf_1248 1344985 - 1347102 + | methyl-accepting chemotaxis sensory transducer TERM 1893 1347099 - 1347143 + F 100 -17.4 -3.44274 | opp_overlap 1347100 1347105 1347112, overlap 1347102 1347105 1347112 AAGCCGGTTTAAGCT ATAGAACTGAAAATGGGCCT GTAAA GGGCCCATTTTCAGTTCTGG TTGATCTTATAATTA TERM 1894 1347142 - 1347100 - f 100 -18 -2.52543 | opp_overlap 1347099 1347102 1347105 1347112, overlap 1347105 1347112 AGCCGGTTTAAGCTA TAGAACTGAAAATGGGCC TGTAAAG GGCCCATTTTCAGTTCTG GTTGATCTTATAATT TERM 1895 1347102 - 1347140 + F 100 -21.3 -2.86181 | opp_overlap 1347100 1347105 1347112, overlap 1347099 1347105 1347112 CCGGTTTAAGCTATA GAACTGAAAATGGGCCT GTAAA GGGCCCATTTTCAGTTC TGGTTGATCTTATAA TERM 1896 1347105 - 1347137 + F 100 -17.2 -3.56558 | opp_overlap 1347100 1347105 1347112, overlap 1347102 1347099 1347112 GTTTAAGCTATAGAA CTGAAAATGGGCCT GTAAA GGGCCCATTTTCAG TTCTGGTTGATCTTA TERM 1897 1347137 - 1347105 - f 100 -16.5 -3.551 | opp_overlap 1347105 1347102 1347099 1347112, overlap 1347100 1347112 GTTTAAGCTATAGAA CTGAAAATGGGCC TGTAAAG GGCCCATTTTCAG TTCTGGTTGATCTTA TERM 1898 1347130 - 1347112 - f 75 -7.4 -4.34267 | opp_overlap 1347112 1347105 1347102 1347099, overlap 1347105 1347100 CTATAGAACTGAAAA TGGGCC TGTAAAG GGCCCA TTTTCAGTTCTGGTT TERM 1899 1347112 - 1347130 + F 79 -8.1 -4.33754 | opp_overlap 1347105 1347100 1347112, overlap 1347105 1347102 1347099 CTATAGAACTGAAAA TGGGCCT GTAAA GGGCCCA TTTTCAGTTCTGGTT TERM 1900 1347205 - 1347239 + F 80 -6.2 -4.82901 | opp_overlap 1347206 1347211, overlap 1347206 GGCTTTCTCCCACCA ACAGAACCTCGGCCCA GTG TTGGCCGGGGGCCTGC TTTTTGTGAGACAAA TERM 1901 1347206 - 1347238 + F 78 -9.7 -3.49419 | opp_overlap 1347206 1347211, overlap 1347205 GCTTTCTCCCACCAA CAGAACCTCGGCCCA GTG TTGGCCGGGGGCCTG CTTTTTGTGAGACAA TERM 1902 1347238 - 1347206 - f 74 -9.7 -3.14132 | opp_overlap 1347205 1347206, overlap 1347211 GCTTTCTCCCACCAA CAGAACCTCGGCCCA GTG TTGGCCGGGGGCCTG CTTTTTGTGAGACAA TERM 1903 1347233 - 1347211 - f 75 -9 -3.71284 | opp_overlap 1347206 1347205, overlap 1347206 CTCCCACCAACAGAA CCTCGGCCCA GTG TTGGCCGGGG GCCTGCTTTTTGTGA TERM 1904 1347836 - 1347822 - g 71 -2.8 -5.00616 | GCCGGTTTCAAAAAA TTCATC CCC GGTGAA ACGGATTTCGCTGAT Dhaf_1249 1347537 - 1348559 + | phosphate binding protein TERM 1905 1348564 - 1348619 + F 100 -11.3 -4.16016 | opp_overlap 1348556, overlap 1348565 1348567 TTAAGCAGTGAGCCG TCACAACGATTTTGGGGTGGGAAGT GTTCCG ATTTCCCATCCCGGAAGTGTTGTGC TTTATTCGGAAGTGC TERM 1906 1348565 - 1348618 + F 100 -14.8 -3.09288 | opp_overlap 1348556, overlap 1348564 1348567 TAAGCAGTGAGCCGT CACAACGATTTTGGGGTGGGAAGT GTTCCG ATTTCCCATCCCGGAAGTGTTGTG CTTTATTCGGAAGTG TERM 1907 1348567 - 1348616 + F 84 -11.6 -3.10244 | overlap 1348565 1348564 AGCAGTGAGCCGTCA CAACGATTTTGGGGTGGGAAGT GTTCCG ATTTCCCATCCCGGAAGTGTTG TGCTTTATTCGGAAG Dhaf_1250 1348669 - 1349589 + | phosphate ABC transporter, inner membrane subunit PstC TERM 1908 1350097 - 1350112 + G 81 -6.1 -5.00616 | opp_overlap 1350097 CGGCCCAGGAAGCCA TCCGG GCTGTG CCGGA TTTTTTGCGGGAAGC Dhaf_1251 1349589 - 1350476 + | phosphate ABC transporter, inner membrane subunit PstA Dhaf_1252 1350491 - 1351270 + | phosphate ABC transporter, ATPase subunit TERM 1909 1351300 - 1351334 + F 100 -15.1 -5.18726 | opp_overlap 1351300 AGCAGAACAGAAAAA CACCCATAAAGGGCC AAGGC GGCACTTTGTGGGTG TTTTTGTTGTCCAAA TERM 1910 1351334 - 1351300 - f 100 -13.6 -5.16133 | opp_overlap 1351300 AGCAGAACAGAAAAA CACCCATAAAGGGCCA AGG CGGCACTTTGTGGGTG TTTTTGTTGTCCAAA TERM 1911 1352829 - 1352818 - g 73 -2.2 -5.04385 | TATATTTCTAAAAAA GACA AGTA TGCC GACGAAATAGAGACT TERM 1912 1353073 - 1353057 - g 83 -6.5 -4.84761 | overlap 1353058 ATATCTGGATAAAAA GGAGCTG TGT CAGCTCA TCCTGAATCTGGTCC TERM 1913 1353072 - 1353058 - g 74 -10 -3.50133 | overlap 1353057 TATCTGGATAAAAAG GAGCTG TGT CAGCTC ATCCTGAATCTGGTC Dhaf_1253 1351462 - 1353378 + | signal transduction histidine kinase, nitrogen specific, NtrB Dhaf_1254 1353378 - 1354172 + | hypothetical protein TERM 1914 1354591 - 1354611 + G 78 -5.3 -4.99043 | overlap 1354592 CCTTAGCTCTGATTC AGGGATTGG CAG CCAAGCCCA TTTTCTTTGTACCGG TERM 1915 1354919 - 1354956 + G 100 -14.9 -4.7497 | gap 1, overlap 1354902 CGGTCAGGTCAGACT GCCTCTGATCGGG-GCCA TCG TGGCTCCCGGTCAAGGGC TTTTTCCTCAATACG Dhaf_1255 1354281 - 1355102 + | metallophosphoesterase Dhaf_1256 1355127 - 1355969 + | short-chain dehydrogenase/reductase SDR TERM 1916 1356535 - 1356510 - g 71 -10.4 -2.79518 | overlap 1356509 GGAAAATCTGCAAAT CCAGCCTTCC TCAAGC GGCAGGCTGG TGATACTGACAGGCG Dhaf_1257 1355980 - 1357536 + | AMP-dependent synthetase and ligase Dhaf_1258 1357517 - 1358044 + | hypothetical protein Dhaf_1259 1358041 - 1358610 + | GCN5-related N-acetyltransferase Dhaf_1260 1358801 - 1359334 + | metal dependent phosphohydrolase TERM 1917 1359479 - 1359499 + F 79 -7.6 -4.33653 | GATTTAGCACCATGA GGCTGACA GAAAA TGTTAGCC TTTAATTTTTACATA Dhaf_1261 1359573 - 1360481 + | domain of unknown function DUF1731 Dhaf_1262 1360567 - 1361262 + | aspartate racemase Dhaf_1263 1361280 - 1361768 + | hypothetical protein Dhaf_1264 1361809 - 1362096 + | hypothetical protein TERM 1918 1362114 - 1362138 + F 100 -10.7 -4.81359 | opp_overlap 1362109 1362108 AACCCAGAACTCTAA GGGGAATTGCC GGC GGCAACTCCTC TTTTATATTTGAATT Dhaf_1265 1362206 - 1363813 + | ferredoxin Dhaf_1266 1363877 - 1364695 + | DNA-(apurinic or apyrimidinic site) lyase Dhaf_1267 1364765 - 1365229 + | hypothetical protein TERM 1919 1365379 - 1365365 - g 76 -7.2 -4.32402 | opp_overlap 1365362, overlap 1365362 GCTCAATTAAAACAA TGCTTT ACA AAAGCA GGGTTTCAAAATGTA Dhaf_1268 1365290 - 1365832 + | protein of unknown function DUF1697 Dhaf_1269 1365932 - 1366561 + | hypothetical protein Dhaf_1270 1366630 - 1367418 + | alpha/beta hydrolase fold protein TERM 1920 1367613 - 1367647 + F 100 -9.3 -5.93252 | opp_overlap 1367615 ATGAACCTGCCTTAA CACCATGGAGGTCGT TAAAT ACGTGCTTCATGGTG TTTTTTATTTTTGAG TERM 1921 1368097 - 1368083 - g 71 -8.6 -3.62096 | opp_overlap 1368082 CGCGATGATGTGAAA TTCTCC GAT GGAGAA CCTTTGACTGCCGAT Dhaf_1271 1367759 - 1369360 + | extracellular solute-binding protein family 5 TERM 1922 1369608 - 1369644 + G 80 -4.2 -5.21709 | opp_overlap 1369596 1369607 1369630, overlap 1369610 AAAGGGATAATGTAG CCCGTTACTGGGGGCT GGATA AGCCCCCGGCGGAGCG TTTTTTAATCTGGGC Dhaf_1272 1369427 - 1370425 + | binding-protein-dependent transport systems inner membrane component Dhaf_1273 1370418 - 1371278 + | binding-protein-dependent transport systems inner membrane component TERM 1923 1371719 - 1371740 + G 100 -15.1 -3.23853 | overlap 1371717 1371720 TTCCCCTTTCAGCTT TCCGGCGGG ATGG CCCGCCGGG TCTTGGTTGCCACCG TERM 1924 1371720 - 1371739 + G 100 -16.4 -2.54098 | overlap 1371719 1371717 TCCCCTTTCAGCTTT CCGGCGGG ATGG CCCGCCGG GTCTTGGTTGCCACC Dhaf_1274 1371290 - 1372201 + | ABC transporter related Dhaf_1275 1372191 - 1372790 + | ABC transporter related TERM 1925 1372875 - 1372851 - f 81 -7.1 -4.66987 | opp_overlap 1372853, overlap 1372853 TAGAGGGCAATAAAA GACCGAGGC CATGGGT GCCTCGGTT TTCGTTAACCCCTTT TERM 1926 1372873 - 1372853 - f 86 -9.7 -3.94438 | opp_overlap 1372853, overlap 1372851 GAGGGCAATAAAAGA CCGAGGC CATGGGT GCCTCGG TTTTCGTTAACCCCT TERM 1927 1372853 - 1372873 + F 93 -9.7 -4.41047 | opp_overlap 1372851 1372853 GAGGGCAATAAAAGA CCGAGGC CATGGGT GCCTCGG TTTTCGTTAACCCCT Dhaf_1277 1374447 - 1375022 + | dimethylsulfoxide reductase, chain B TERM 1928 1375152 - 1375136 - g 87 -10.8 -4.20749 | opp_overlap 1375134 1375145 1375150 CAAGAGTTTAAGAAA GCGGCC TATCT GGCCGC CGGTTTAAGCATCAT Dhaf_1278 1375025 - 1375855 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1929 1376135 - 1376119 - g 71 -2.9 -5.00616 | opp_overlap 1376132, overlap 1376121 TTGTCCGTCAAAAAA CCGATGA CAC CCATCCG GACAGCCCGGATTAT TERM 1930 1378046 - 1378031 - g 85 -10.4 -4.00122 | overlap 1378026 TGAGAAGAAAGAGAA GAGCGG CTAT CCGCTC CAGCTCACCACGATC Dhaf_1279 1375875 - 1378472 + | Trimethylamine-N-oxide reductase (cytochrome c) Dhaf_1280 1378472 - 1379050 + | dimethylsulfoxide reductase, chain B Dhaf_1281 1379053 - 1379895 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1931 1379940 - 1379975 + F 100 -9.2 -4.9725 | opp_overlap 1379943, overlap 1379943 TACAATACCTTATTT AAATCCTGCTTTCT TCAGTCTT AGAAAGCAGGATTC TTTTTCTATAACACT TERM 1932 1379972 - 1379943 - f 84 -10.9 -3.66646 | opp_overlap 1379940 1379943 AATACCTTATTTAAA TCCTGCTTTCT TCAGTCTT AGAAAGCAGGA TTCTTTTTCTATAAC TERM 1933 1379943 - 1379972 + F 100 -10.9 -4.58943 | opp_overlap 1379943, overlap 1379940 AATACCTTATTTAAA TCCTGCTTTCT TCAGTCTT AGAAAGCAGGA TTCTTTTTCTATAAC Dhaf_1282 1380116 - 1380934 + | anaerobic dimethyl sulfoxide reductase subunit C Dhaf_1283 1381016 - 1381522 + | hypothetical protein TERM 1934 1381617 - 1381631 + G 73 -10 -3.30783 | overlap 1381615 1381615 GGTTTATGCTGTTCA CCACCA TTG TGGTGG TATTCATTATGCTCA Dhaf_1284 1381577 - 1383259 + | histidine kinase Dhaf_1285 1383284 - 1383988 + | two component transcriptional regulator, winged helix family TERM 1935 1384105 - 1384082 - f 71 -6.8 -4.15044 | opp_overlap 1384074 1384082 CGTTCTCGTAAGAAA TACTTGCTAT ATTA AAAGCAAGTA TTTTTTTTGCGAAAA TERM 1936 1384082 - 1384105 + F 100 -6.8 -5.75342 | opp_overlap 1384082, overlap 1384074 CGTTCTCGTAAGAAA TACTTGCTAT ATTA AAAGCAAGTA TTTTTTTTGCGAAAA Dhaf_1286 1384179 - 1384439 + | hypothetical protein Dhaf_1287 1384432 - 1385010 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1288 1385026 - 1385331 + | hypothetical protein TERM 1937 1386670 - 1386684 + G 73 -8.6 -3.91716 | AGTCCTCAAGCCGGT CTCCAT ACC ATGGAG TTATTTAAGGCCTGC TERM 1938 1386846 - 1386792 - g 95 -12 -4.08216 | opp_overlap 1386790 GGAGGGGTTTGAAAA GGTCTTCCTGGTGGTAGCGGAGGCGT TCC ACCCCACAGCTACCACCAAGTATGCC GATGTGGTTCTTCCG Dhaf_1289 1385365 - 1387641 + | molybdopterin oxidoreductase TERM 1939 1388462 - 1388447 - g 77 -10.4 -3.53224 | CAGTTTTCGCTGAAA CCGGAG AAAT CTCCGG AACCAGAAAGTATGA TERM 1940 1388868 - 1388856 - g 100 -9.1 -4.8622 | opp_overlap 1388854 TGCGTGAAGTAAAAA TCGGC ATT GCCGA AATTGATCAAGACCG Dhaf_1290 1387658 - 1389070 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 1941 1389122 - 1389175 + T 100 -15.7 -3.36878 | opp_overlap 1389122 1389127, overlap 1389127 TAAGTGTTTATAAAC TCAAACAGGAGCTTTTCAGCA GATCCACGAAGA TGCTGAAAAGCTCCTGTTTAA TTCTACATCAATGGG TERM 1942 1389175 - 1389122 - T 100 -18.5 -2.924 | opp_overlap 1389122 1389127, overlap 1389127 TAAGTGTTTATAAAC TCAAACAGGAGCTTTTCAGCAGATC CACG AAGATGCTGAAAAGCTCCTGTTTAA TTCTACATCAATGGG TERM 1943 1389127 - 1389170 + T 100 -15.6 -4.00868 | opp_overlap 1389127 1389122, overlap 1389122 GTTTATAAACTCAAA CAGGAGCTTTTCAGCA GATCCACGAAGA TGCTGAAAAGCTCCTG TTTAATTCTACATCA TERM 1944 1389170 - 1389127 - T 100 -16.2 -3.89215 | opp_overlap 1389122 1389127, overlap 1389122 GTTTATAAACTCAAA CAGGAGCTTTTCAGCAGATC CACG AAGATGCTGAAAAGCTCCTG TTTAATTCTACATCA Dhaf_1291 1390707 - 1389178 - | phospholipase D/Transphosphatidylase TERM 1945 1389923 - 1389938 + g 73 -4.6 -4.67353 | overlap 1389925 TCCGCCAGATTGATT CCGCCT GTAA AGGCTG TTTTTCCATCGATCA Dhaf_1292 1390883 - 1391335 + | transcriptional regulator, MarR family Dhaf_1293 1391403 - 1393229 + | ATP-dependent metalloprotease FtsH TERM 1946 1393234 - 1393268 + F 100 -16.7 -3.66654 | gap 1, opp_overlap 1393234, overlap 1393237 TCTCCAGGTAGAAAA CAAGGACTGGTGATGT TTTG ACATC-CCAGTCCTTG TTTGGCGTTAAGCTG TERM 1947 1393268 - 1393234 - f 100 -16.7 -4.42386 | gap 1, opp_overlap 1393234 1393237 TCTCCAGGTAGAAAA CAAGGACTGGTGATGT TTTG ACATC-CCAGTCCTTG TTTGGCGTTAAGCTG TERM 1948 1393237 - 1393265 + F 100 -12.6 -3.96618 | gap 1, opp_overlap 1393234, overlap 1393234 CCAGGTAGAAAACAA GGACTGGTGATGT TTTG ACATC-CCAGTCC TTGTTTGGCGTTAAG Dhaf_1294 1393364 - 1394206 + | glycosyl transferase family 8 TERM 1949 1394321 - 1394336 + G 71 -10.4 -2.77781 | overlap 1394319 1394321 CAGTTGTGCAGCAGG GGCAGC AAAA GCTGCC TGCCTTTTGCTGAAA TERM 1950 1395201 - 1395213 + G 77 -4.8 -4.88918 | opp_overlap 1395201 GAAATTCGCAGCAAG GGCT GGGGG AGCC TTTTATTTAAACTGG Dhaf_1295 1394253 - 1395398 + | cobalamin biosynthesis protein CbiD TERM 1951 1395670 - 1395685 + G 100 -6.1 -5.67283 | opp_overlap 1395670 AAGGGAAGAACCAAA GAGCC GCTCAG GGCTC TTTTTTGTTTAGCTT TERM 1952 1395959 - 1395946 - g 73 -2.3 -5.06451 | opp_overlap 1395947 1395954, overlap 1395947 CAGCAGGGCAAAAAA GCCAG TGTC CTGGT TTCCGGTGATCCAGG Dhaf_1296 1395595 - 1396962 + | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 1953 1397133 - 1397162 + G 71 -9.3 -3.51232 | gap 1, overlap 1397129 CCAAATTCTATGGGG TGGGCGTAGGG-CC GGG GGACCCTAAGCTCA TTACTTTACGGGCCG Dhaf_1297 1397060 - 1397803 + | precorrin-2 C20-methyltransferase TERM 1954 1398328 - 1398313 - g 74 -4 -4.88222 | gap 1, overlap 1398326 ATTAAAAGGCAAAAA GGC-TCT TGA AGAAGCC CAGCGGGTCATCTAT TERM 1955 1398717 - 1398731 + G 78 -5.6 -4.89852 | opp_overlap 1398718, overlap 1398718 TACTGGCTCAACATC AGGCCA GCA TGGCCA TTTTTCTCAGTGTGC TERM 1956 1398718 - 1398730 + G 71 -9.1 -3.53188 | opp_overlap 1398718, overlap 1398717 ACTGGCTCAACATCA GGCCA GCA TGGCC ATTTTTCTCAGTGTG Dhaf_1298 1398221 - 1399006 + | precorrin-4 C11-methyltransferase TERM 1957 1399741 - 1399730 - gf 78 -5.8 -4.66163 | opp_overlap 1399729 1399730 1399735, overlap 1399735 AGCTCCAGGGAAAAA GCAG ACCC CTGC ATTTGCTGCCGAGGA Dhaf_1299 1399003 - 1400142 + | cobalamin (vitamin B12) biosynthesis CbiG protein TERM 1958 1400278 - 1400268 - gf 91 -6.8 -5.24129 | CTGGCCGATAAAAAA GTGG TGG CCAC CGGTATGCGCCAGGA Dhaf_1300 1400094 - 1400855 + | precorrin-3B C17-methyltransferase Dhaf_1301 1400852 - 1401637 + | precorrin-6x reductase Dhaf_1302 1401627 - 1401995 + | cobalamin (vitamin B12) biosynthesis CbiX protein Dhaf_1303 1401992 - 1402630 + | Precorrin-8X methylmutase CbiC/CobH TERM 1959 1402679 - 1402661 - g 80 -3 -5.44721 | overlap 1402662 1402665 ATGAGTGGAAAAAAA GCAGCAGC CCG GCTGATGA TCCAAGGGACATCTT TERM 1960 1404074 - 1404062 - g 73 -10.5 -3.20709 | overlap 1404060 AGAAGAGGAGGAACA CGCCC GGT GGGCG AGACCATGTCCCAGG Dhaf_1304 1402646 - 1404190 + | cobyric acid synthase CobQ Dhaf_1305 1404196 - 1405161 + | cobalamin biosynthesis protein CobD TERM 1961 1406224 - 1406236 + G 73 -5.5 -4.64657 | overlap 1406215 CACGCAGTGCAGCGG CCGTG GTC CATGG TTTTTGCACCTTTGA Dhaf_1306 1405827 - 1407293 + | cobyrinic acid a,c-diamide synthase Dhaf_1307 1407296 - 1407856 + | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TERM 1962 1408083 - 1408071 - gf 73 -3.3 -4.88918 | CGAGGGTAAAGAAAA GACCC GCC AGGCC TTGGAGCGATTTGCC TERM 1963 1408709 - 1408698 - gf 74 -4.4 -4.83715 | AACTGAAAAAAAGAA TCTC GAGA GAGA AAGCCGTATTCAATT Dhaf_1308 1407856 - 1408845 + | GHMP kinase TERM 1964 1409453 - 1409468 + GF 73 -5.4 -4.56597 | gap 1 TATGCTATTCCGGGG CTGCGCC TGG GG-GCAG TTTTTGGGGCAGCCA Dhaf_1309 1408787 - 1409923 + | aminotransferase class I and II Dhaf_1310 1410187 - 1411575 + | cytochrome bd ubiquinol oxidase subunit I TERM 1965 1412336 - 1412307 - g 76 -7.1 -4.33417 | opp_overlap 1412326 TTTACTTATAAGAAA GCCGCTGGCAA GGCATTTA TAGCCAGCAGC CTGACTATTGCATCT Dhaf_1311 1411566 - 1412570 + | cytochrome d ubiquinol oxidase, subunit II TERM 1966 1412647 - 1412667 + F 100 -13.3 -4.78752 | TAATTTTAGGGGGAT GGGGCAAGG GAT TCTTGCCCC TTTTTAAATTATGCT Dhaf_1312 1412678 - 1414447 + | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD TERM 1967 1415026 - 1415009 - g 74 -6.9 -4.34402 | opp_overlap 1415009 1415007 TCGGTCAGATGAAAA TCCAGGC CAAA GCCAGGA TGTATACTTTTATTT TERM 1968 1415143 - 1415116 - g 71 -8.5 -3.70109 | overlap 1415123 CAGAGGATTCAAGAA GCCCAAAGTGA ACTCAG TCACTCTGAGC GAAGAATGGCTAAAG Dhaf_1313 1414444 - 1416165 + | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC TERM 1969 1416172 - 1416182 + F 86 -3.2 -5.63012 | GGCTATTGAAGCTGG GGTG TGT CATC TTTTTATTTATTTTT TERM 1970 1416245 - 1416227 - f 80 -4.6 -5.21459 | opp_overlap 1416226 AAAAATAAAAAGAAA CAGAAAGT TGT ACTTTTTG GTATGTTCATAAGGA Dhaf_1314 1416379 - 1417788 + | Citrate transporter TERM 1971 1417903 - 1417846 - T 79 -6.7 -4.614 | gap 3, opp_overlap 1417852, overlap 1417852 GCCAATGATACAAAA CAGAAACTCCCGATGGAAA-GGTCTATG TGAGT CACAGACCATTTTCA-CGGGAGTTT-TA ATCTACCTTATCAGG TERM 1972 1417898 - 1417852 - T 100 -10.4 -4.53648 | opp_overlap 1417852, overlap 1417846 GATACAAAACAGAAA CTCCCGATGGAAA-GGTCTATG TGAGT CACAGACCATTTTCA-CGGGAG TTTTAATCTACCTTA TERM 1973 1417852 - 1417898 + T 100 -10.4 -4.36931 | opp_overlap 1417852 1417846 GATACAAAACAGAAA CTCCCGATGGAAA-GGTCTATG TGAGT CACAGACCATTTTCA-CGGGAG TTTTAATCTACCTTA Dhaf_1315 1418505 - 1417954 - | hypothetical protein TERM 1974 1418189 - 1418207 + g 91 -11 -4.36914 | GACCTGGCATTTACG GCTTCGGC TGC GCTGAAGC TTTTCTCAAGAGAAC TERM 1975 1418302 - 1418312 + g 78 -5.4 -4.85599 | opp_overlap 1418302 ATTATCCAAAGTATA GGTA TAA TACC TTTTTGTAAAATCCA Dhaf_1316 1418747 - 1420975 + | Propeptide PepSY amd peptidase M4 TERM 1976 1421059 - 1421003 - f 84 -9.8 -3.8398 | opp_overlap 1421009 1421013, overlap 1421006 1421013 ATTCAAAATATAGAA TAGTAGGAAAGACTGTAAGAGG TATGAATGAAGCG CCTCTTACAGTCTTTCTTAGTA TATCGGAATGAATAA TERM 1977 1421056 - 1421006 - f 80 -11.5 -2.68489 | opp_overlap 1421009 1421013, overlap 1421003 1421013 CAAAATATAGAATAG TAGGAAAGACTGTAAGAGG TATGAATGAAGCG CCTCTTACAGTCTTTCTTA GTATATCGGAATGAA TERM 1978 1421009 - 1421053 + F 100 -13.9 -3.322 | opp_overlap 1421006 1421003 1421013, overlap 1421013 AATATAGAATAGTAG GAAAGACTGTAAGAGGT ATGAATGAAGC GCCTCTTACAGTCTTTC TTAGTATATCGGAAT TERM 1979 1421013 - 1421049 + F 86 -8.9 -4.31293 | opp_overlap 1421006 1421003 1421013, overlap 1421009 TAGAATAGTAGGAAA GACTGTAAGAGGT ATGAATGAAGC GCCTCTTACAGTC TTTCTTAGTATATCG TERM 1980 1421049 - 1421013 - f 75 -8.2 -3.8572 | opp_overlap 1421013 1421009, overlap 1421006 1421003 TAGAATAGTAGGAAA GACTGTAAGAGG TATGAATGAAGCG CCTCTTACAGTC TTTCTTAGTATATCG TERM 1981 1421197 - 1421208 + F 70 -5.8 -4.36914 | opp_overlap 1421195 1421197 TGTCAGAAAAAACTA TGCC CCGG GGCA TTTTATGGAAAGGAG Dhaf_1317 1421232 - 1422197 + | hypothetical protein TERM 1982 1422236 - 1422272 + F 100 -8.7 -4.75518 | TTTTTCAAAGTTGAT GGAGCATTGCAGAGTCT TAA AGGTGGTGCGATGCTCC TTTTAATTTTCTCTG Dhaf_1318 1422383 - 1423258 + | 6-phosphogluconate dehydrogenase NAD-binding Dhaf_1319 1423352 - 1423849 + | phage shock protein C, PspC Dhaf_1320 1424403 - 1423846 - | hypothetical protein TERM 1983 1423929 - 1423896 - G 74 -11.2 -2.78679 | gap 1, opp_overlap 1423895 1423896 1423890, overlap 1423895 GTTTTTTAGCTAAAG GTAGGCCTACCCTTT TGGCC AAAGGG-AAGCCTAC TTTTTGTATTAAGGG TERM 1984 1423896 - 1423929 + g 100 -9 -5.0916 | gap 1, opp_overlap 1423895 1423896, overlap 1423895 1423890 GTTTTTTAGCTAAAG GTAGGCCTACCCTTT TGGCC AAAGGGAAG-CCTAC TTTTTGTATTAAGGG TERM 1985 1426832 - 1426818 - g 74 -2.8 -5.16572 | opp_overlap 1426820, overlap 1426820 ACCCAAGGGAAAAAA GAGAAC ATG GTTCTT CAATATCTTGAAAAT Dhaf_1321 1424838 - 1427087 + | putative cell wall binding repeat 2-containing protein TERM 1986 1427161 - 1427179 + T 100 -11.7 -5.4251 | opp_overlap 1427161 GAAGAAACTAGTTAA GGAGGGG GATTG CCCCTCC TTTTTTCTGTCTAAA TERM 1987 1427179 - 1427161 - T 84 -11.7 -3.18869 | opp_overlap 1427161 GAAGAAACTAGTTAA GGAGGGG GATTG CCCCTCC TTTTTTCTGTCTAAA Dhaf_1322 1428579 - 1427218 - | ferredoxin-dependent glutamate synthase TERM 1988 1427355 - 1427369 + g 83 -10 -4.20042 | TAGCTTTTTTACCCA TGGCCT GCA AGGCCA TTTTCAGCTCTTCCT TERM 1989 1428677 - 1428709 + r 77 -8.4 -3.94333 | opp_overlap 1428680, overlap 1428679 1428680 1428682 TGCTGCATTAATAAA AAACAGCCGCGACT AAAAA AGTCGTGGCTGCTG TTTCCTATGTTAGTC TERM 1990 1428679 - 1428707 + r 83 -11 -3.55205 | opp_overlap 1428680, overlap 1428677 1428680 1428682 CTGCATTAATAAAAA ACAGCCGCGACT AAAAA AGTCGTGGCTGC TGTTTCCTATGTTAG TERM 1991 1428706 - 1428680 - R 100 -12.3 -5.5112 | opp_overlap 1428680 1428679 1428677 1428682 TGCATTAATAAAAAA CAGCCGCGACT AAAAA AGTCGTGGCTG CTGTTTCCTATGTTA TERM 1992 1428680 - 1428706 + r 100 -14.5 -2.724 | opp_overlap 1428680, overlap 1428679 1428677 1428682 TGCATTAATAAAAAA CAGCCGCGACT AAAAA AGTCGTGGCTG CTGTTTCCTATGTTA TERM 1993 1428682 - 1428704 + r 81 -11.3 -2.89361 | opp_overlap 1428680, overlap 1428680 1428679 1428677 CATTAATAAAAAACA GCCGCGACT AAAAA AGTCGTGGC TGCTGTTTCCTATGT Dhaf_1323 1429099 - 1428719 - | endoribonuclease L-PSP TERM 1994 1429242 - 1429299 + r 86 -12 -3.15699 | gap 1, opp_overlap 1429246 1429247 1429249, overlap 1429244 CACTGTTTGTCAATG AAAAG-GAGGGAAGCCCGGAGCCCTAT CGACA ATGGGGTTCCGGGCTTCCCGCTCAGTA TATTACTCGATGGGT TERM 1995 1429244 - 1429297 + r 100 -14.6 -3.13867 | gap 1, opp_overlap 1429246 1429247 1429249, overlap 1429242 CTGTTTGTCAATGAA AAG-GAGGGAAGCCCGGAGCCCTAT CGACA ATGGGGTTCCGGGCTTCCCGCTCAG TATATTACTCGATGG TERM 1996 1429294 - 1429246 - R 100 -18.1 -4.4078 | opp_overlap 1429244 1429242, overlap 1429247 1429249 GTTTGTCAATGAAAA GGAGGGAAGCCCGGAGCCCTATC GAC AATGGGGTTCCGGGCTTCCCGCT CAGTATATTACTCGA TERM 1997 1429293 - 1429247 - R 100 -21.6 -3.24146 | opp_overlap 1429244 1429242, overlap 1429246 1429249 TTTGTCAATGAAAAG GAGGGAAGCCCGGAGCCCTATC GAC AATGGGGTTCCGGGCTTCCCGC TCAGTATATTACTCG TERM 1998 1429291 - 1429249 - R 100 -22.8 -3.18268 | opp_overlap 1429244 1429242, overlap 1429247 1429246 TGTCAATGAAAAGGA GGGAAGCCCGGAGCCCTATC GAC AATGGGGTTCCGGGCTTCCC GCTCAGTATATTACT Dhaf_1324 1430690 - 1429302 - | Tryptophanase Dhaf_1325 1432178 - 1430820 - | amino acid permease-associated region TERM 1999 1431097 - 1431077 - G 76 -9.7 -3.68073 | TAGTCCAGGTAATAA CTGCGGCAA TGA TCGCCACAG CCATGAGATACGTAA TERM 2000 1432150 - 1432161 + g 78 -5.8 -4.80178 | CGGTTTTTTAGACCG CGGT GCAT ACCG TTTTCTTGGTTGCTC TERM 2001 1432386 - 1432352 - R 100 -19 -5.48213 | opp_overlap 1432360 1432379 TATCTAAAATAAAAA TGTGATAAGAAAAGTT GAC AACTTTTCTTATCACA TGGTGAAAAATTTTT TERM 2002 1432360 - 1432378 + r 71 -9 -3.34043 | opp_overlap 1432352 ATAAAAATGTGATAA GAAAAGTT GAC AACTTTTC TTATCACATGGTGAA Dhaf_1326 1434048 - 1432426 - | putative sigma54 specific transcriptional regulator TERM 2003 1434174 - 1434157 - R 100 -10.5 -5.75538 | CCTAAAAAAGAAAAA GCCGGCG ATTT CGCCGAC TGAGTAAAGGTATAA Dhaf_1327 1436290 - 1434197 - | glutamine synthetase catalytic region TERM 2004 1436967 - 1436990 + G 75 -8 -4.25104 | GGAGATGATTGTGTA CCCCGCGGCA GAGT TGCCTCCGGG TTTTGATCCAACGGC Dhaf_1328 1436620 - 1438596 + | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 2005 1438633 - 1438665 + F 100 -9.2 -5.08601 | opp_overlap 1438632 1438634, overlap 1438634 GCTTTTAAAAAAGAT AGCCCAACAGATGA AACCA TTGTCTGTTGGGCA TTTTTATTCGCATAG TERM 2006 1438664 - 1438634 - f 73 -8.4 -3.66166 | opp_overlap 1438634 1438633, overlap 1438632 CTTTTAAAAAAGATA GCCCAACAGA TGAAACCATTG TCTGTTGGGC ATTTTTATTCGCATA TERM 2007 1438634 - 1438664 + F 100 -12.7 -3.64438 | opp_overlap 1438632 1438634, overlap 1438633 CTTTTAAAAAAGATA GCCCAACAGATGA AACCA TTGTCTGTTGGGC ATTTTTATTCGCATA Dhaf_1329 1438742 - 1439572 + | Catalase TERM 2008 1439597 - 1439642 + T 79 -7.8 -4.30987 | gap 2, opp_overlap 1439600, overlap 1439600 TGCATTGCACTATGA AAATGCTCCCT-GAGAA-GAGG TAAA CCTGATTCTCCAGGGAGCATTG TTTGTTATCAGCACT TERM 2009 1439639 - 1439600 - T 88 -9.5 -4.30844 | gap 2, opp_overlap 1439600 1439597 ATTGCACTATGAAAA TGCTCCCT-GAGAA-GAGG TAAA CCTGATTCTCCAGGGAGCA TTGTTTGTTATCAGC TERM 2010 1439600 - 1439639 + T 88 -9.5 -4.27512 | gap 2, opp_overlap 1439600, overlap 1439597 ATTGCACTATGAAAA TGCTCCCT-GAGAA-GAGG TAAA CCTGATTCTCCAGGGAGCA TTGTTTGTTATCAGC Dhaf_1330 1440278 - 1439661 - | protein of unknown function UPF0066 TERM 2011 1439943 - 1439963 + g 73 -10.5 -3.22521 | opp_overlap 1439939, overlap 1439938 1439948 ATAGGCATCAATGCT GGAAATGAG AAT CTCGTTTCC TTCAATTCCTCTAAG Dhaf_1331 1440472 - 1440284 - | hypothetical protein Dhaf_1332 1440737 - 1440952 + | 4-oxalocrotonate tautomerase TERM 2012 1440981 - 1441010 + F 100 -15.2 -4.4261 | opp_overlap 1440981 1440985, overlap 1440985 AATCTGGCGAAGCTA TAAAGCTAGCGG AAATCC CCGCTAGCTTTA TTTTGCTATTGAAAA TERM 2013 1441010 - 1440981 - f 100 -15.9 -2.52795 | opp_overlap 1440981 1440985, overlap 1440985 AATCTGGCGAAGCTA TAAAGCTAGCGGA AATC CCCGCTAGCTTTA TTTTGCTATTGAAAA TERM 2014 1441006 - 1440985 - f 100 -12.3 -3.97368 | opp_overlap 1440985 1440981, overlap 1440981 TGGCGAAGCTATAAA GCTAGCGGA AATC CCCGCTAGC TTTATTTTGCTATTG TERM 2015 1440985 - 1441006 + F 100 -11.6 -4.77698 | opp_overlap 1440981 1440985, overlap 1440981 TGGCGAAGCTATAAA GCTAGCGG AAATCC CCGCTAGC TTTATTTTGCTATTG TERM 2016 1441281 - 1441263 - g 73 -10.4 -3.14132 | overlap 1441268 GCTTTGGCGGAGGAA CAGAAGAA GGA TTCTTCTG TGGAACTGGTACGCC TERM 2017 1442235 - 1442208 - g 85 -11.2 -3.96148 | GGTCTTGATCATAAA GTGCGGCTTCTC AACT GGGAAGCCGCCC ATCGTCACCAATAAG Dhaf_1333 1441074 - 1442249 + | methylated-DNA/protein-cysteine methyltransferase Dhaf_1334 1442293 - 1442673 + | Glyoxalase/bleomycin resistance protein/dioxygenase TERM 2018 1442667 - 1442653 - f 75 -8.6 -3.89346 | CCCTCAGGTGAGAAA CTGGAA CTA TTCCAG GGATAATCAGCAGCT TERM 2019 1442746 - 1442736 - g 74 -2.6 -5.10461 | GGTAGGCAAGAAAAA TTAA ACT TTAA TTGGCAAAATGGGGA TERM 2020 1442994 - 1443007 + G 75 -8.1 -4.19577 | CGGAAATGGTCCAGT GCCAG ATAT CTGGC TTATTTTCAGGCTTA TERM 2021 1443311 - 1443290 - g 79 -9.5 -3.85698 | opp_overlap 1443290 1443289 1443292 GCTCCGCCGCAGAAA CATACGGGT CTGT ACCCATATG ATTTATGGGCTGCCG Dhaf_1335 1442712 - 1443698 + | hypothetical protein Dhaf_1336 1443953 - 1443759 - | hypothetical protein Dhaf_1337 1445219 - 1443978 - | lysine 2,3-aminomutase YodO family protein TERM 2022 1445108 - 1445129 + g 76 -7.3 -4.33248 | CGCTTAAGGCAAGGC CGCAGGGAA TCGT TTCTTTGCG TTTGTTGTAGGATTG TERM 2023 1445287 - 1445274 - H 89 -6.7 -5.32944 | TTTAGAATCAAAAAA GAACC TCGC GGTTC CCAAGAAAAAGCATA TERM 2024 1446140 - 1446153 + G 70 -8.1 -3.96148 | GAATCGAGCAATTTT CTCCG GGAG CGGAG TTTATCCTGGACGAC Dhaf_1338 1445629 - 1446234 + | transcriptional regulator, GntR family TERM 2025 1446451 - 1446441 - g 100 -6.8 -5.80817 | overlap 1446443 TGGAATATAAAAAAA CTGC CCG GCAG GCTACAGAGCGAAAC Dhaf_1339 1446302 - 1447582 + | signal transduction histidine kinase, LytS Dhaf_1340 1447604 - 1447960 + | holo-acyl-carrier-protein synthase TERM 2026 1448485 - 1448474 - g 70 -2.2 -4.88067 | ATCGAGGGAGAAAAA CAGC GCAG ACTG GTGAGAATCTCGCTT TERM 2027 1449263 - 1449273 + G 73 -8.2 -3.84246 | overlap 1449256 CTGGGTTGGCGCCAG GGCC GGG GGCC TTTAATCCTTACCCC Dhaf_1341 1448120 - 1449685 + | carbohydrate kinase, YjeF related protein Dhaf_1342 1449697 - 1450809 + | alanine racemase Dhaf_1343 1451525 - 1450995 - | ferripyochelin binding protein (fbp) Dhaf_1344 1451818 - 1452834 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 2028 1452842 - 1452869 + F 100 -17.1 -4.67048 | opp_overlap 1452838, overlap 1452866 CTAAGTAAGAGCCTG GCAGGGAACGG CGAAGT CCGTTCCCTGC TTTATTTTCAAGTAG Dhaf_1345 1452939 - 1454369 + | domain of unknown function DUF1727 Dhaf_1346 1454372 - 1455136 + | CobB/CobQ domain protein glutamine amidotransferase Dhaf_1347 1455366 - 1455644 + | putative transcriptional regulator, CopG family TERM 2029 1455701 - 1455719 + G 73 -10.2 -3.17051 | opp_overlap 1455704, overlap 1455699 GTCGTCGGATCCGAG CAAGGCGG TAC CCGCCCTG TGTTGGTGATCCAAA TERM 2030 1455716 - 1455704 - g 73 -10.5 -3.16564 | opp_overlap 1455701 1455699 GTCGGATCCGAGCAA GGCGG TAC CCGCC CTGTGTTGGTGATCC Dhaf_1348 1455641 - 1455991 + | transcriptional modulator of MazE/toxin, MazF TERM 2031 1456038 - 1456064 + F 100 -13.8 -5.31855 | opp_overlap 1456032 AGATAAACACAGCGG CAGCGTTGGTCG GAA CGACTAATGCTG TTTTTATTCTTCATC Dhaf_1349 1456188 - 1456910 + | peptidase C26 TERM 2032 1457019 - 1457065 + F 100 -19.8 -3.49475 | opp_overlap 1457018 1457023, overlap 1457023 GGCTGATTAGTCAAC TAAAGGCCCTATGACATTAGTG AAA TACTGATGTTATGGGGCCTTTA TTATATAACCATGAA TERM 2033 1457023 - 1457061 + F 100 -16.2 -4.38927 | opp_overlap 1457018 1457023, overlap 1457019 GATTAGTCAACTAAA GGCCCTATGACATTAGTG AAA TACTGATGTTATGGGGCC TTTATTATATAACCA TERM 2034 1457061 - 1457023 - f 80 -8.9 -3.94002 | opp_overlap 1457023 1457019, overlap 1457018 GATTAGTCAACTAAA GGCCCTATGACATTAGT GAAAT ACTGATGTTATGGGGCC TTTATTATATAACCA Dhaf_1350 1457199 - 1459334 + | molybdopterin oxidoreductase Dhaf_1351 1459597 - 1459905 + | hypothetical protein Dhaf_1352 1459936 - 1460163 + | hypothetical protein TERM 2035 1460235 - 1460276 + F 89 -3.9 -5.58522 | gap 1, overlap 1460249 TTGACCAGTAAACTG GAGATTAAGCA-GGACCTTA TCT TAAGGTATATACTTGATCTC TTTTTCTTTTGTGTA Dhaf_1353 1460361 - 1461239 + | nitrogenase iron protein TERM 2036 1462311 - 1462299 - g 73 -3.3 -4.97405 | opp_overlap 1462299 ACGGACAAAAAGAAA GACTC AGG GAGGC ATTTCAGGCGAAGAA Dhaf_1354 1461278 - 1462612 + | Nitrogenase Dhaf_1355 1462623 - 1464140 + | Nitrogenase Dhaf_1356 1464178 - 1465281 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein TERM 2037 1465467 - 1465500 + G 85 -10.4 -4.12254 | gap 1, opp_overlap 1465467 1465469 1465475 CAACTATAAATTCAA TACCACAA-CAGCGG TTTAT CCGCTGTTTGTGGGA TTCTTTGTGCTCCTG TERM 2038 1465500 - 1465467 - g 75 -10.4 -3.35526 | gap 1, opp_overlap 1465467, overlap 1465469 1465475 CAACTATAAATTCAA TACCACAA-CAGCGG TTTAT CCGCTGTTTGTGGGA TTCTTTGTGCTCCTG TERM 2039 1465498 - 1465469 - g 84 -13 -3.23449 | gap 1, opp_overlap 1465467, overlap 1465467 1465475 ACTATAAATTCAATA CCACAA-CAGCGG TTTAT CCGCTGTTTGTGG GATTCTTTGTGCTCC TERM 2040 1465491 - 1465475 - g 71 -9.4 -3.53189 | opp_overlap 1465467, overlap 1465469 1465467 AATTCAATACCACAA CAGCGG TTTAT CCGCTG TTTGTGGGATTCTTT Dhaf_1357 1465303 - 1466319 + | binding-protein-dependent transport systems inner membrane component TERM 2041 1466677 - 1466667 - g 83 -4 -5.39755 | overlap 1466671 TATAAGGAGAAAAAA GAAA GCA TTTC AAAATTGCTCCAACT TERM 2042 1466685 - 1466671 - g 74 -2.8 -5.1471 | opp_overlap 1466682 1466683, overlap 1466667 1466683 AGGAGAAAAAAGAAA GCATTT CAA AATTGC TCCAACTCATTGGGC Dhaf_1358 1466316 - 1467104 + | ABC transporter related Dhaf_1359 1467123 - 1467485 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein Dhaf_1360 1467532 - 1468488 + | Radical SAM domain protein TERM 2043 1468511 - 1468569 + T 100 -20.2 -3.66018 | gap 3, opp_overlap 1468516, overlap 1468513 CCTTTGGCAGGGGTG ---AATCAGGGGGACAGGTACCATTATTC ATCT GAATAATGGTACCTGTCCCCCTGATTCAC TTATTGAAGTCCTAG TERM 2044 1468513 - 1468564 + T 100 -36.4 -3.29013 | opp_overlap 1468516, overlap 1468511 TTTGGCAGGGGTGAA TCAGGGGGACAGGTACCATTATTC ATCT GAATAATGGTACCTGTCCCCCTGA TTCACTTATTGAAGT TERM 2045 1468561 - 1468516 - T 100 -32.3 -2.71731 | opp_overlap 1468513 1468511 GGCAGGGGTGAATCA GGGGGACAGGTACCATTATTC ATCT GAATAATGGTACCTGTCCCCC TGATTCACTTATTGA Dhaf_1361 1470804 - 1468570 - | sigma54 specific transcriptional regulator, Fis family TERM 2046 1470447 - 1470437 - G 71 -6.8 -4.19276 | TCAAAACGTTCAAAA GAGG TTG CCTC GCTGATCATAGTTAC TERM 2047 1470937 - 1470963 + H 89 -11.8 -3.35867 | opp_overlap 1470941, overlap 1470941 TGAATAGGGCTTAAG TTAACACTGTTA ACT TGACAGTGTTAA TTAGTTAACCGTTAA TERM 2048 1470941 - 1470959 + H 71 -8.2 -3.45366 | opp_overlap 1470941, overlap 1470937 TAGGGCTTAAGTTAA CACTGTTA ACT TGACAGTG TTAATTAGTTAACCG TERM 2049 1471520 - 1471536 + G 89 -3.7 -5.59962 | overlap 1471515 CAGTATCTTCTAACC CCCAA ATGGTTA TTGGG TTTTTATTTGTTTTA Dhaf_1362 1471138 - 1471713 + | DoxX family protein TERM 2050 1471736 - 1471768 + T 100 -11.3 -4.96848 | opp_overlap 1471733 1471736 AATCTATAAATATGA GCGTCTGCCCC AACCAAGTCAC GGGGCAGGCGC TTTTTCTATCGGCAA TERM 2051 1471768 - 1471736 - T 73 -9.8 -2.90913 | opp_overlap 1471736, overlap 1471733 AATCTATAAATATGA GCGTCTGCCCCA ACCAAGTCA CGGGGCAGGCGC TTTTTCTATCGGCAA Dhaf_1363 1472316 - 1471774 - | nitroreductase TERM 2052 1472574 - 1472541 - R 70 -2.5 -4.9934 | gap 2, opp_overlap 1472541 1472562 ATAATATGAGAAAAA TGGCA-G-CTACCCT GGTGTA AGGGTGGTCGTGCCA TCTTTAATAGATTAG Dhaf_1364 1472959 - 1472642 - | hypothetical protein TERM 2053 1473031 - 1472988 - R 85 -5.6 -5.0916 | gap 1 TTTCTAATATAAAAA TTATAG-CATGGTTATTTTAA TTT TCAAAACTACCATGGCTACAA TTTTTACATAATCAG Dhaf_1365 1473258 - 1473091 - | hypothetical protein Dhaf_1366 1474800 - 1473409 - | histidine kinase TERM 2054 1473560 - 1473573 + g 86 -8.1 -4.83615 | CCTGTACCGCCAGTT TCCCG AGAG CGGGA TTTTTCTGAGCGATA TERM 2055 1474079 - 1474108 + g 75 -5.7 -4.64657 | gap 1, overlap 1474104 1474107 TCGTGAGCAATATCT GCAGTGAGCTGCTT GCG GAGCCGTTC-CTGC TTTTTCAGGCTTTCG Dhaf_1367 1475497 - 1474805 - | two component transcriptional regulator, winged helix family TERM 2056 1475669 - 1475640 - R 78 -5.8 -4.86385 | gap 1, opp_overlap 1475636 1475640 ATCGGTAAAAATAAA GAAGACC-CAAGC CGTTT GCTTTCGGTCTTC TTAGTTTTCAGGCCT Dhaf_1368 1476444 - 1475677 - | UBA/THIF-type NAD/FAD binding protein Dhaf_1369 1476784 - 1477365 + | hypothetical protein Dhaf_1370 1477433 - 1478131 + | ABC transporter related Dhaf_1371 1478128 - 1479288 + | protein of unknown function DUF214 Dhaf_1372 1479322 - 1480458 + | protein of unknown function DUF214 TERM 2057 1480471 - 1480504 + F 100 -12.6 -3.73914 | opp_overlap 1480476, overlap 1480476 1480501 TAGCTTAGTGCAGTG TAGAAGGGGAAGCC CAAAAA GGCTTCCTCTTTTA TTATTAATAAATAAT TERM 2058 1480476 - 1480499 + F 100 -10.3 -4.92757 | opp_overlap 1480476, overlap 1480471 TAGTGCAGTGTAGAA GGGGAAGCC CAAAAA GGCTTCCTC TTTTATTATTAATAA TERM 2059 1480499 - 1480476 - f 71 -8.8 -3.33162 | opp_overlap 1480471 1480476 TAGTGCAGTGTAGAA GGGGAAGCCC AAAA AGGCTTCCTC TTTTATTATTAATAA Dhaf_1373 1480649 - 1482364 + | methyl-accepting chemotaxis sensory transducer TERM 2060 1482381 - 1482425 + F 100 -19.6 -4.38927 | gap 1, opp_overlap 1482373 1482386, overlap 1482381 1482382 GTCAGAATTCCCATC G-ACAAGCACTGAATGACGAG AAAG CTCGTCATTCAGTGCTTGCAC TTTATTCTGTACAAA TERM 2061 1482381 - 1482424 + F 100 -19.8 -3.22874 | opp_overlap 1482373 1482386, overlap 1482381 1482382 GTCAGAATTCCCATC GACAAGCACTGAATGACGAG AAAG CTCGTCATTCAGTGCTTGCA CTTTATTCTGTACAA TERM 2062 1482382 - 1482423 + F 100 -23.3 -2.53243 | opp_overlap 1482373 1482386, overlap 1482381 1482381 TCAGAATTCCCATCG ACAAGCACTGAATGACGAG AAAG CTCGTCATTCAGTGCTTGC ACTTTATTCTGTACA TERM 2063 1482419 - 1482386 - f 100 -22.7 -3.36175 | opp_overlap 1482382 1482381 1482381, overlap 1482373 AATTCCCATCGACAA GCACTGAATGACGAG AAAG CTCGTCATTCAGTGC TTGCACTTTATTCTG Dhaf_1374 1482528 - 1482944 + | hypothetical protein TERM 2064 1483060 - 1483043 - g 85 -7.1 -4.94992 | TCAAACTTAGAAAAA CTGTAAT GAGA ATTACAG CGGGCTTGGTGCTTG Dhaf_1375 1483012 - 1483605 + | hypothetical protein TERM 2065 1484047 - 1484074 + G 81 -3.4 -5.40072 | gap 1, overlap 1484048 1484049 1484050 ACTTCCGGCTATGGA TTA-CCGGAACCC ACC GGGTTGCGGATAC TTTTTTTAGGAGGAC TERM 2066 1484050 - 1484070 + G 72 -11.1 -2.69257 | overlap 1484049 1484048 1484047 TCCGGCTATGGATTA CCGGAACCC ACC GGGTTGCGG ATACTTTTTTTAGGA TERM 2067 1484102 - 1484119 + G 83 -4.9 -5.1963 | GACCAATAACCGAAT TGCTTAT TGGA ATAGGCA TTTTTCTTGGTTCAC Dhaf_1376 1483690 - 1484211 + | hypothetical protein TERM 2068 1484237 - 1484225 - f 74 -4.9 -4.75174 | GATGGAATGGAAAAA CAATA GGA TATTG AAGCCGCATAGGGTA Dhaf_1377 1484290 - 1484817 + | GCN5-related N-acetyltransferase Dhaf_1378 1484839 - 1485051 + | hypothetical protein Dhaf_1379 1485163 - 1485546 + | hypothetical protein Dhaf_1380 1485619 - 1486263 + | transcriptional regulator, TetR family TERM 2069 1486264 - 1486306 + F 83 -8.7 -4.08767 | opp_overlap 1486266 1486267 1486269, overlap 1486266 1486267 1486269 CTTTCCCAAAAATAG AAGTAGCTATTCTTTACAA ATGGC TTGTAGAGAATAGCTAATA TTTTGAAAACATACA TERM 2070 1486266 - 1486304 + F 90 -11.3 -3.6422 | opp_overlap 1486266 1486267 1486269, overlap 1486264 1486267 1486269 TTCCCAAAAATAGAA GTAGCTATTCTTTACAA ATGGC TTGTAGAGAATAGCTAA TATTTTGAAAACATA TERM 2071 1486304 - 1486266 - f 88 -9.8 -4.07746 | opp_overlap 1486264 1486266 1486267 1486269, overlap 1486267 1486269 TTCCCAAAAATAGAA GTAGCTATTCTTTACAAA TGG CTTGTAGAGAATAGCTAA TATTTTGAAAACATA TERM 2072 1486303 - 1486267 - f 100 -13.3 -3.03925 | opp_overlap 1486266 1486264 1486267 1486269, overlap 1486266 1486269 TCCCAAAAATAGAAG TAGCTATTCTTTACAAA TGG CTTGTAGAGAATAGCTA ATATTTTGAAAACAT TERM 2073 1486267 - 1486303 + F 100 -14.8 -2.78211 | opp_overlap 1486267 1486266 1486269, overlap 1486266 1486264 1486269 TCCCAAAAATAGAAG TAGCTATTCTTTACAA ATGGC TTGTAGAGAATAGCTA ATATTTTGAAAACAT TERM 2074 1486269 - 1486301 + F 95 -13 -2.93623 | opp_overlap 1486269 1486267 1486266, overlap 1486267 1486266 1486264 CCAAAAATAGAAGTA GCTATTCTTTACAA ATGGC TTGTAGAGAATAGC TAATATTTTGAAAAC TERM 2075 1486301 - 1486269 - f 83 -11.5 -3.06384 | opp_overlap 1486267 1486266 1486264 1486269, overlap 1486267 1486266 CCAAAAATAGAAGTA GCTATTCTTTACAAA TGG CTTGTAGAGAATAGC TAATATTTTGAAAAC Dhaf_1381 1486362 - 1487585 + | major facilitator superfamily MFS_1 Dhaf_1382 1487701 - 1488369 + | protein of unknown function DUF161 Dhaf_1383 1489505 - 1488375 - | Cystathionine gamma-synthase TERM 2076 1489603 - 1489586 - H 100 -11.3 -5.1963 | opp_overlap 1489597, overlap 1489597 TCGAACTAACAAAAA CGACCTC CAAA GAGGTCG TGAACTGTTTCCACG TERM 2077 1489623 - 1489597 - H 75 -8.7 -3.60431 | opp_overlap 1489597, overlap 1489586 AAAACGACCTCCAAA GAGGTCGTGAA CTGTT TCCACGTCCTC TTATCTTCGAACCTG Dhaf_1384 1489968 - 1490324 + | hypothetical protein TERM 2078 1491034 - 1491045 + G 77 -4.4 -5.06103 | opp_overlap 1491034 GGCCCGATTGGAAAT TCCT AAAA AGGA TTTTTTAAAACTTAT Dhaf_1385 1490375 - 1491178 + | ExsB family protein TERM 2079 1491405 - 1491428 + F 86 -6.7 -5.03405 | opp_overlap 1491405 AAATATGACACATAA GCTCTTCCT GGAATA GGGAAGGGC TTTTTATATGCTCTT Dhaf_1386 1491496 - 1492524 + | Homoserine dehydrogenase TERM 2080 1492597 - 1492574 - f 74 -8.1 -3.97057 | opp_overlap 1492574 TATAATGGAATTAAA GCGAACTGG TTCAGG CCGGTTCGC TTTTTGATGATTTCC TERM 2081 1492574 - 1492597 + F 100 -11 -4.84363 | opp_overlap 1492574 TATAATGGAATTAAA GCGAACTGGT TCAG GCCGGTTCGC TTTTTGATGATTTCC Dhaf_1387 1492872 - 1493576 + | hypothetical protein TERM 2082 1493827 - 1493839 + G 77 -6.3 -4.65747 | AACTCTTGGATGCGG GGAAT ACC ATTCC TTTTATTGCACGTTA TERM 2083 1494470 - 1494490 + G 71 -9 -3.48924 | TCCTACAGAGCGTAT GCTTGCTC TGCTC GAGCAGGC TTATGTGAAGCATGG Dhaf_1388 1493745 - 1495910 + | RNA binding S1 domain protein Dhaf_1389 1495963 - 1497132 + | amidohydrolase Dhaf_1390 1497238 - 1497741 + | protein of unknown function UPF0079 TERM 2084 1497881 - 1497922 + G 83 -7.5 -4.76075 | opp_overlap 1497885, overlap 1497901 GATTCCTGTACTGGA TCAAG-TCCTGGAGGCATC GGCCTG GAAG-CTCCAGGATCTTGA TTTTATTGGTGTGGT Dhaf_1391 1497750 - 1498466 + | peptidase M22 glycoprotease Dhaf_1392 1498463 - 1498909 + | ribosomal-protein-alanine acetyltransferase Dhaf_1393 1498939 - 1499958 + | metalloendopeptidase, glycoprotease family TERM 2085 1500002 - 1500047 + F 100 -28 -3.02471 | opp_overlap 1500016, overlap 1500004 1500016 TGTCAGTAGGTTGAC GAGGCTGCTGCAAATTTCCA AGCGCC TGGAAATTTGCAGCAGCCTC TATATGTAATGCGGG TERM 2086 1500004 - 1500045 + F 100 -24.8 -3.0682 | opp_overlap 1500016, overlap 1500002 1500016 TCAGTAGGTTGACGA GGCTGCTGCAAATTTCCA AGCGCC TGGAAATTTGCAGCAGCC TCTATATGTAATGCG TERM 2087 1500276 - 1500254 - f 86 -11.4 -3.30441 | opp_overlap 1500247 1500257 GAGTATTGTCCATAA TTACCCACAG ATC CTGTGGATAA TGTGGATAAGTTAGG TERM 2088 1500690 - 1500704 + G 73 -10 -3.30771 | TGCAGGCCTTTCTAT TTGCCG TTG CGGCAA TTATAGGAAGTGTAG Dhaf_1394 1500491 - 1501417 + | protein of unknown function DUF340 membrane Dhaf_1395 1501561 - 1502163 + | 5-formyltetrahydrofolate cyclo-ligase TERM 2089 1502142 - 1502158 + F 70 -7.3 -3.87149 | TGAACAGGGTGCCAT GCGTTTT AAG GAAACGC TTTGAATTTAGTGGA Dhaf_1396 1502192 - 1502674 + | NADH dehydrogenase (ubiquinone) 24 kDa subunit TERM 2090 1502822 - 1502837 + G 100 -10.4 -4.82901 | ATGTGGAGCTCATTG CCACGG GTTG CCGTGG TTTTTGTGAGCAAGG Dhaf_1397 1502686 - 1504479 + | NADH dehydrogenase (quinone) TERM 2091 1506715 - 1506702 - g 78 -5.2 -5.00616 | opp_overlap 1506704, overlap 1506704 CGTCTGGGCAAAAAA GGCC TGCAAT GGCC GGTTCCTCATGCCGA Dhaf_1398 1504497 - 1507178 + | formate dehydrogenase, alpha subunit TERM 2092 1507192 - 1507240 + F 95 -12.6 -3.29144 | gap 1, opp_overlap 1507197 1507199, overlap 1507197 1507199 AATTTAAGCAATAAA GAAAACT-CGCCTCAGGTGGAGT GTCG ACTCTATCTGAGGCGTAGTTGAC TTATCCGCGGAGTGG TERM 2093 1507197 - 1507235 + F 100 -15.5 -3.23274 | gap 1, opp_overlap 1507197 1507199, overlap 1507192 1507199 AAGCAATAAAGAAAA CT-CGCCTCAGGTGGAGT GTCG ACTCTATCTGAGGCGTAG TTGACTTATCCGCGG TERM 2094 1507235 - 1507197 - f 100 -11.1 -5.13527 | gap 1, opp_overlap 1507192 1507197 1507199, overlap 1507199 AAGCAATAAAGAAAA CT-CGCCTCAGGTGGAGT GTCG ACTCTATCTGAGGCGTAG TTGACTTATCCGCGG TERM 2095 1507199 - 1507232 + F 100 -18.3 -2.80511 | opp_overlap 1507199 1507197, overlap 1507197 1507192 GCAATAAAGAAAACT CGCCTCAGGTGGAGT GTCG ACTCTATCTGAGGCG TAGTTGACTTATCCG TERM 2096 1507232 - 1507199 - f 95 -13.9 -2.77779 | opp_overlap 1507197 1507192 1507199, overlap 1507197 GCAATAAAGAAAACT CGCCTCAGGTGGAGT GTCG ACTCTATCTGAGGCG TAGTTGACTTATCCG TERM 2097 1507295 - 1507309 + F 75 -5.6 -4.63218 | opp_overlap 1507294, overlap 1507266 ATATCCAGTATATAG CGTGAG GCA CTCTCG TTTTGTTACAGAACA TERM 2098 1507707 - 1507719 + G 71 -10.5 -2.83908 | ATTGGAAGCATGCTT GCGGG AAG CCCGC TATGATCATGCCTTT TERM 2099 1507828 - 1507846 + G 75 -10.3 -3.4158 | CTAGTCCCCGAGATT GAGGGTG TAGTT CACCCTC TTCATGCTTTTTACC Dhaf_1399 1507441 - 1508064 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 2100 1508390 - 1508422 + F 100 -9.1 -4.77775 | overlap 1508386 1508385 1508393 TCTGTAGGGTATGCG GGAGCTCCGCGGTTT TAC AGACCGTGGGGCTTA TTTATTTTGTGGAAT TERM 2101 1508393 - 1508419 + F 100 -13 -4.48317 | overlap 1508386 1508385 1508390 GTAGGGTATGCGGGA GCTCCGCGGTTT TAC AGACCGTGGGGC TTATTTATTTTGTGG Dhaf_1400 1508464 - 1509435 + | molybdenum cofactor biosynthesis protein A Dhaf_1401 1509438 - 1509929 + | molybdenum cofactor biosynthesis protein C Dhaf_1402 1509973 - 1510407 + | MOSC domain containing protein Dhaf_1403 1510407 - 1510907 + | molybdenum cofactor synthesis domain protein Dhaf_1404 1510967 - 1511857 + | protein of unknown function DUF88 TERM 2102 1511958 - 1511904 - f 81 -7.1 -4.66987 | opp_overlap 1511913 1511916, overlap 1511907 1511910 CATAGGGTAATAAAA GAATGAGAAGAAGGGGTATCTGGCC GGGAG GGCTGGATATCCCTTCTTCTAAGGC GCCGTGATGATTTTT TERM 2103 1511955 - 1511907 - f 100 -11.8 -4.43909 | opp_overlap 1511913 1511916, overlap 1511904 1511910 AGGGTAATAAAAGAA TGAGAAGAAGGGGTATCTGGCC GGGAG GGCTGGATATCCCTTCTTCTAA GGCGCCGTGATGATT TERM 2104 1511952 - 1511910 - f 100 -13.5 -3.17906 | opp_overlap 1511913 1511916, overlap 1511907 1511904 GTAATAAAAGAATGA GAAGAAGGGGTATCTGGCC GGGAG GGCTGGATATCCCTTCTTC TAAGGCGCCGTGATG TERM 2105 1511913 - 1511949 + F 100 -16 -3.28924 | opp_overlap 1511910 1511907 1511904, overlap 1511916 ATAAAAGAATGAGAA GAAGGGGTATCTGGCC GGGAG GGCTGGATATCCCTTC TTCTAAGGCGCCGTG TERM 2106 1511916 - 1511946 + F 100 -11.9 -3.78934 | opp_overlap 1511910 1511907 1511904, overlap 1511913 AAAGAATGAGAAGAA GGGGTATCTGGCC GGGAG GGCTGGATATCCC TTCTTCTAAGGCGCC Dhaf_1405 1512257 - 1512541 + | chaperonin Cpn10 Dhaf_1406 1512641 - 1514275 + | chaperonin GroEL TERM 2107 1514308 - 1514361 + T 100 -9.8 -4.6526 | gap 2, opp_overlap 1514308 1514309, overlap 1514309 AAATGCCTGAAATAA GTGAGACTCGTGTT-GCGATG-TGGC TATA GCCAATTTTGCTAACACGAGTCTCAA TTTTTAGAGGTTTCT TERM 2108 1514309 - 1514360 + T 100 -13.3 -3.38071 | gap 2, opp_overlap 1514309 1514308, overlap 1514308 AATGCCTGAAATAAG TGAGACTCGTGTT-GCGATG-TGGC TATA GCCAATTTTGCTAACACGAGTCTCA ATTTTTAGAGGTTTC TERM 2109 1514368 - 1514406 + T 100 -12.6 -5.80727 | opp_overlap 1514382 GAGTCTCAATTTTTA GAGGTTTCTTATAAGTTC GCT GAACTTGCAGGAAGCCTC TTTTTTATTATTTTT Dhaf_1407 1514761 - 1514420 - | transcriptional regulator, XRE family TERM 2110 1514515 - 1514541 + g 100 -7.3 -5.66684 | opp_overlap 1514517, overlap 1514517 ATATAAGAGCCAATT CATCCTCCGTT AATTC AACGGGGGATA TTTTTTTGTCACTTA TERM 2111 1514517 - 1514539 + g 85 -9.9 -4.46105 | opp_overlap 1514517, overlap 1514515 ATAAGAGCCAATTCA TCCTCCGTT AATTC AACGGGGGA TATTTTTTTGTCACT TERM 2112 1515316 - 1515286 - H 82 -3.3 -5.42605 | gap 1 TGAACAAAAAGAAAA TGCCCGC-AAGTCC TGGC AGATTTAACGGGCA GAAGAAAAATAATTT TERM 2113 1515562 - 1515548 - g 71 -4.2 -4.66938 | overlap 1515549 ATTCTTAACACAAAA TCCGTT AGT AACGGT AAAAAGATAAAGGGG Dhaf_1408 1515479 - 1515739 + | putative relication initiation protein Dhaf_1409 1515863 - 1516291 + | phage transcriptional regulator, RinA family TERM 2114 1516344 - 1516373 + F 72 -7.1 -4.07133 | opp_overlap 1516349, overlap 1516345 1516349 GTATTATGGTATCAG TGAAAGGCGTCAA GAGA TGGGCGCCTTTCC TTATTTATAGGAGTA TERM 2115 1516345 - 1516372 + F 76 -10.6 -3.03798 | opp_overlap 1516349, overlap 1516344 1516349 TATTATGGTATCAGT GAAAGGCGTCAA GAGA TGGGCGCCTTTC CTTATTTATAGGAGT Dhaf_1410 1516492 - 1516653 + | hypothetical protein TERM 2116 1516770 - 1516789 + G 100 -10.8 -5.61596 | AGCGAAGAGATCCGG CAAGGCTT TGAT AAGCCTTG TTTTTTTGTCAAGCT Dhaf_1411 1516674 - 1517141 + | phage protein Dhaf_1412 1517134 - 1517313 + | hypothetical protein TERM 2117 1517862 - 1517846 - g 88 -13.7 -3.18264 | CGCTCCACTGATCAA CGGCTCC GAC GGAGCCG TAACCAATCAGGCTT Dhaf_1413 1517316 - 1518632 + | phage protein Dhaf_1414 1518652 - 1519119 + | phage protein TERM 2118 1519187 - 1519211 + F 81 -9.3 -3.7645 | opp_overlap 1519187 AAGGAGAGTTTTAAA GGAGATCAGCA GTA TTCTGGTCTCC TTCTCTTGCTTGCGT Dhaf_1415 1519272 - 1519685 + | XkdN-like protein TERM 2119 1521553 - 1521532 - g 72 -10.1 -2.98719 | opp_overlap 1521529 1521532 TGACTACAGGAGACA TCCGCAACG GAAG CGATGCGGA TACTATTGTGGCAAA TERM 2120 1521532 - 1521553 + G 71 -10.1 -2.80074 | opp_overlap 1521532, overlap 1521529 TGACTACAGGAGACA TCCGCAACG GAAG CGATGCGGA TACTATTGTGGCAAA Dhaf_1416 1519929 - 1521626 + | hypothetical protein TERM 2121 1521913 - 1521940 + G 74 -4.2 -4.89063 | gap 1 CCAGCTTATCATCAG GTGGATGGAGT CTAAACA AC-CCATCCGC TTTATTTTTACCTCC Dhaf_1417 1521656 - 1522327 + | Peptidoglycan-binding LysM TERM 2122 1522449 - 1522439 - g 77 -8.2 -4.21933 | opp_overlap 1522445 TGAATTGGAAAACAA GCCG GAT CGGC AAGGCTGGTAGCTTA Dhaf_1418 1522357 - 1523328 + | phage protein Dhaf_1419 1523359 - 1523718 + | phage protein Dhaf_1420 1523715 - 1524116 + | hypothetical protein TERM 2123 1525043 - 1525023 - g 87 -5.4 -5.50774 | overlap 1525024 TAGAACAAAGAAAAA CCTGGGCT GCGCA AACCCAGA TCATCATCCGTATGG Dhaf_1421 1524116 - 1525195 + | Baseplate J family protein TERM 2124 1525377 - 1525363 - g 74 -10 -3.57309 | TAAAACGCCGGGAAA GGATGC TGG GCATCC AGGCTGATCCCACGA TERM 2125 1525432 - 1525419 - g 73 -2.3 -5.0133 | opp_overlap 1525408 1525419, overlap 1525430 1525431 GACTTCCGGAAAAAA CGGAT TATT AACCG TTATTCAACGAAGCC Dhaf_1422 1525188 - 1525775 + | phage-like element PBSX protein Dhaf_1423 1525772 - 1526053 + | hypothetical protein Dhaf_1424 1526056 - 1527495 + | hypothetical protein TERM 2126 1527619 - 1527602 - f 78 -10.5 -3.35798 | opp_overlap 1527596 ACTGGGGATTTACAA GAGGGGC TAAG GCCCCCC TGAAATTGATTTTAT TERM 2127 1527743 - 1527768 + F 77 -10.5 -3.14881 | opp_overlap 1527747 ACATATTCCTTCATA TGAAGAGTTGC AACA GCAACTCCTCA TTAGTCAGGGGGTTA TERM 2128 1527764 - 1527747 - f 76 -9.9 -3.25942 | opp_overlap 1527743 ATTCCTTCATATGAA GAGTTGC AACA GCAACTC CTCATTAGTCAGGGG Dhaf_1426 1527790 - 1527936 + | hypothetical protein Dhaf_1427 1527990 - 1528889 + | hypothetical protein Dhaf_1428 1528906 - 1529178 + | hypothetical protein Dhaf_1429 1529180 - 1529323 + | hypothetical protein TERM 2129 1529349 - 1529366 + F 76 -2.6 -5.34555 | opp_overlap 1529351, overlap 1529351 TGCAACACCAACACT AACGCC ACACAG GGCGTA TTTTTTATGCTCTAA Dhaf_1430 1529447 - 1529743 + | hypothetical protein TERM 2130 1530329 - 1530351 + G 90 -9.1 -4.65458 | TCCAGGATTTTTGGG GGCTGCTGC TTGTT GTGGCAGCC TTTATTATTTATCTG Dhaf_1432 1530292 - 1530654 + | hypothetical protein TERM 2131 1530665 - 1530682 + F 70 -2.7 -4.92239 | opp_overlap 1530665 1530667 1530679, overlap 1530667 GATAAGACTTAAAAT CATCTCT TAAT AGAGATA TTTTTCGCTTTTTCG TERM 2132 1531102 - 1531058 - f 100 -5.2 -6.28401 | gap 1, opp_overlap 1531064, overlap 1531061 CAAAAAACAAAAAAA TAATAAGAAGCCAGCTACCCT CCCC AGAGCATTTGGCTTCTTA-TA GAATTACCCTAAAGG TERM 2133 1531100 - 1531061 - f 100 -9.4 -5.04908 | opp_overlap 1531064, overlap 1531058 AAAACAAAAAAATAA TAAGAAGCCAGCTACCCT CCCC AGAGCATTTGGCTTCTTA TAGAATTACCCTAAA Dhaf_1433 1531197 - 1531400 + | hypothetical protein TERM 2134 1531561 - 1531597 + F 84 -5.3 -5.26316 | gap 2 CGGCAAACCAGACCA GACCTCAC-AG-GGTTC AGAAA GAACTTCTTGTGGGGTC TTTTTTCTCAAATAG Dhaf_1434 1531779 - 1532318 + | hypothetical protein TERM 2135 1532332 - 1532360 + T 100 -14 -5.60993 | opp_overlap 1532331 1532330 AAACCTAAAAAAGTG CTGAGGATCACG TATTT CGTGATTCTCAG TTTTTTTATAGAAAA TERM 2136 1532421 - 1532378 - T 100 -7.6 -5.36441 | gap 1, opp_overlap 1532378 TTTTTATAGAAAAAA GATTGG-CCCACATGTGTA TCTAATC TACACGTGTGTGTCCAATC TTTCAAATGGTCAAG TERM 2137 1532378 - 1532421 + T 80 -9.8 -3.62096 | gap 1, opp_overlap 1532378 TTTTTATAGAAAAAA GATTGG-CCCACATGTGTA TCTAATC TACACGTGTGTGTCCAATC TTTCAAATGGTCAAG Dhaf_1435 1532893 - 1532432 - | hypothetical protein Dhaf_1436 1533118 - 1533783 + | hypothetical protein TERM 2138 1533838 - 1533872 + F 95 -9.5 -4.41177 | gap 1, overlap 1533842 TAATTTGTGTCAGCG GAAAGAGGC-TTCTGA GAAT TTGGAAGGCCTCTTTC TTTTAACTTTCTCTC TERM 2139 1533842 - 1533868 + F 71 -4.5 -4.74598 | gap 1, overlap 1533838 TTGTGTCAGCGGAAA GAGGC-TTCTGA GAAT TTGGAAGGCCTC TTTCTTTTAACTTTC Dhaf_1437 1534004 - 1534549 + | hypoxanthine phosphoribosyltransferase TERM 2140 1534605 - 1534577 - f 77 -8.2 -4.01047 | gap 1, opp_overlap 1534579, overlap 1534579 AAGCATGAACAAGAA TAGAGCTTCGGCA GATT TGCCG-AGCTCTT TTAAGCATACTGTTT TERM 2141 1534603 - 1534579 - f 84 -10.8 -3.58505 | gap 1, opp_overlap 1534579, overlap 1534577 GCATGAACAAGAATA GAGCTTCGGCA GATT TGCCG-AGCTC TTTTAAGCATACTGT TERM 2142 1534579 - 1534603 + F 93 -10.8 -4.12456 | gap 1, opp_overlap 1534579 1534577 GCATGAACAAGAATA GAGCTTCGGCA GATT TGCCG-AGCTC TTTTAAGCATACTGT Dhaf_1438 1534661 - 1536193 + | GMP synthase, large subunit TERM 2143 1536254 - 1536295 + F 82 -6.7 -4.75967 | gap 1 TTTAAGTATTTGATG GTGGTTATGATTTCAGCC TGTTTTT GGC-GTTATCATAACCAC TTGTTTTTTGTCGTT Dhaf_1439 1536346 - 1537299 + | integrase family protein TERM 2144 1537313 - 1537345 + F 89 -6.3 -5.27335 | AAGATTAAATCTGAA GAAGTGTCCATTC ACAAAAA GAGTGGCCGCTTC TTTTTATTTAAAGAA TERM 2145 1537429 - 1537375 - f 81 -10.9 -3.33434 | overlap 1537377 1537379 ATCAAAAAGAGTCAA TACATTGCTATCTGCTAGCATCCAT GATAT ATTATTGCTAGCAGATAGCAAAGGA GAATTGAAAATGAGT TERM 2146 1537427 - 1537377 - f 100 -13.5 -3.21994 | overlap 1537375 1537379 CAAAAAGAGTCAATA CATTGCTATCTGCTAGCATCCAT GATAT ATTATTGCTAGCAGATAGCAAAG GAGAATTGAAAATGA TERM 2147 1537425 - 1537379 - f 100 -14.7 -3.15274 | overlap 1537377 1537375 AAAAGAGTCAATACA TTGCTATCTGCTAGCATCCAT GATAT ATTATTGCTAGCAGATAGCAA AGGAGAATTGAAAAT Dhaf_1440 1537439 - 1538119 + | hypothetical protein Dhaf_1441 1538400 - 1538759 + | protein of unknown function DUF891 Dhaf_1442 1538762 - 1539073 + | transcriptional regulator, XRE family TERM 2148 1539276 - 1539252 - g 83 -7.1 -4.74285 | opp_overlap 1539256, overlap 1539253 AGTGACAATACAAAA TCAAGTGGCGA AAG TTGCCACTTGG TAAAAACAGCCGAAA TERM 2149 1539275 - 1539253 - g 75 -10.6 -3.43486 | opp_overlap 1539256, overlap 1539252 GTGACAATACAAAAT CAAGTGGCGA AAG TTGCCACTTG GTAAAAACAGCCGAA Dhaf_1443 1539051 - 1539488 + | hypothetical protein Dhaf_1444 1541182 - 1540011 - | transposase IS3/IS911 family protein TERM 2150 1540853 - 1540871 + g 80 -4.4 -5.20216 | overlap 1540851 1540854 ACATCTTCTCAACCG GGCAGCTG GAG CTGCTGGC TTTTTTAATCATCTG Dhaf_1446 1541273 - 1541461 + | hypothetical protein Dhaf_1447 1541466 - 1541624 + | hypothetical protein TERM 2151 1541691 - 1541671 - Tf 89 -6.8 -5.31275 | overlap 1541673 GGGTATCACAAAAAA GAGCAGCC CTAGC GGCTGCTT AAGGTTGTATTCTGG TERM 2152 1541689 - 1541673 - Tf 88 -9.4 -4.29153 | overlap 1541671 GTATCACAAAAAAGA GCAGCC CTAGC GGCTGC TTAAGGTTGTATTCT TERM 2153 1542921 - 1542907 - gT 78 -10 -3.44848 | opp_overlap 1542906 1542905 1542909, overlap 1542905 TGTTCCCAGGAAACA CATCGG ATA CCGATG CCTTTATTGAAGCGG Dhaf_1449 1544904 - 1543714 - | hypothetical protein Dhaf_1448 1542180 - 1543778 + | transposase IS1634 family protein TERM 2154 1545172 - 1545187 + Tr 86 -6.8 -5.01497 | CAAAATTATTTTAGA GAGCCG ATTA TGGCTC TTTTTCTATGGTGAT TERM 2155 1545216 - 1545232 + Tr 72 -7.9 -3.76224 | opp_overlap 1545216 ATAGGAAAAGAAAAA GCAGCCC TTA GGACTGC TTTACTGAATACCAA TERM 2156 1545232 - 1545216 - TR 100 -10.1 -5.52079 | opp_overlap 1545216 ATAGGAAAAGAAAAA GCAGCCC TTA GGACTGC TTTACTGAATACCAA Dhaf_1450 1545635 - 1545234 - | protein of unknown function UPF0150 TERM 2157 1545700 - 1545673 - R 71 -9.2 -3.04144 | opp_overlap 1545673 TTTTTAGGGGGAATA GCGGGGACTA TTGGAGTG TAATCCCCGC TTGCTTCAATATGGA Dhaf_1451 1545877 - 1545680 - | YcfA family protein Dhaf_1452 1545980 - 1546255 + | hypothetical protein TERM 2158 1546288 - 1546315 + G 83 -11.4 -3.59279 | opp_overlap 1546287, overlap 1546283 TTATGTGGAAGAAGT GGCTGTAGTCAG ATTA TTGACTATAGCC TTACTTATTGTGATA Dhaf_1453 1546258 - 1546728 + | hypothetical protein Dhaf_1454 1546858 - 1547355 + | phage terminase, small subunit, , P27 family TERM 2159 1547405 - 1547382 - g 73 -8.2 -3.94002 | overlap 1547384 CAGGAGTTAATCAAA TACAGTGATG ATAT CATCACTGGA AAAATAAACGCTTGC TERM 2160 1547403 - 1547384 - g 79 -10.8 -3.55604 | overlap 1547382 GGAGTTAATCAAATA CAGTGATG ATAT CATCACTG GAAAAATAAACGCTT TERM 2161 1547414 - 1547446 + G 95 -7.7 -5.49234 | opp_overlap 1547414 CACTGGAAAAATAAA CGCTTGCAAGAAG CACAAAT CAGCTTGCAAGCG TTTTTTATTGGATAT TERM 2162 1547446 - 1547414 - g 86 -7.7 -4.87389 | opp_overlap 1547414 CACTGGAAAAATAAA CGCTTGCAAGAAG CACAAAT CAGCTTGCAAGCG TTTTTTATTGGATAT Dhaf_1455 1547355 - 1549073 + | Terminase TERM 2163 1549098 - 1549119 + G 86 -12.3 -3.49387 | opp_overlap 1549097 1549096, overlap 1549097 1549096 ATAGAATTAAAATGT TCCTCCGGG ATTA CCTGGAGGA TATCTTTGTGTTTTT Dhaf_1456 1549079 - 1549261 + | hypothetical protein TERM 2164 1549588 - 1549556 - g 73 -8.6 -3.79113 | opp_overlap 1549556 ACTTCTGGACAACAA TAGAGTTTCAGAAA AACCA CTTCGGAAACTCTA TTTGTTATATTGATA TERM 2165 1549556 - 1549588 + G 78 -7.9 -4.4768 | opp_overlap 1549556 ACTTCTGGACAACAA TAGAGTTTCAGAA AAACCAC TTCGGAAACTCTA TTTGTTATATTGATA Dhaf_1457 1549267 - 1550520 + | phage portal protein, HK97 family Dhaf_1458 1550510 - 1551103 + | phage prohead protease, HK97 family TERM 2166 1551092 - 1551115 + F 91 -6.1 -5.47159 | opp_overlap 1551092 TTACAGCTTGAATTA GAACTTCTT TAAATT AGGAAGTTC TTTTTTATATTCAAA TERM 2167 1551905 - 1551919 + G 71 -8.6 -3.73224 | opp_overlap 1551904 TAAATGCTTGAATAC GAAGGT CAA ACCTTC TTTACTCAAAAATAC Dhaf_1459 1551168 - 1552277 + | phage major capsid protein, HK97 family TERM 2168 1552290 - 1552319 + F 84 -10.9 -3.57918 | gap 1, opp_overlap 1552290 1552294, overlap 1552294 TAAGGAGAGGTAAGA GGAAGGGAGAGCTA ATT TA-CTCTCCCTTTC TTCTATGATATAGGT TERM 2169 1552294 - 1552315 + F 82 -8.1 -4.41716 | gap 1, opp_overlap 1552290 1552294, overlap 1552290 GAGAGGTAAGAGGAA GGGAGAGCTA ATT TA-CTCTCCC TTTCTTCTATGATAT Dhaf_1460 1552350 - 1552640 + | uncharacterized phage protein (possible DNA packaging) Dhaf_1461 1552637 - 1552966 + | phage head-tail adaptor Dhaf_1462 1552967 - 1553323 + | phage protein, HK97 gp10 family Dhaf_1463 1553334 - 1553693 + | hypothetical protein Dhaf_1464 1553715 - 1554311 + | phage major tail protein, phi13 family TERM 2170 1554329 - 1554352 + F 95 -9.6 -4.54727 | GTAATAGAATTTTGG GGAGTGTCTA ATAT TGGGCACTCC TTTTCATTTGAAAAA Dhaf_1465 1554342 - 1554746 + | hypothetical protein TERM 2171 1554754 - 1554743 - f 71 -2.2 -5.15117 | opp_overlap 1554751, overlap 1554751 TAAAACCCCAAAAAA CTAG ATAA CCAG TCAGAATCTGAGGAA TERM 2172 1554787 - 1554751 - f 70 -7.5 -3.74447 | gap 1, opp_overlap 1554751, overlap 1554743 CAAAAAACTAGATAA CCAGTCAGAATCTGAG GAATGG CT-AGATTTTGACTGG TTTTACTATGTCTCT TERM 2173 1554751 - 1554787 + F 100 -9.7 -4.41956 | gap 1, opp_overlap 1554743 1554751 CAAAAAACTAGATAA CCAGTCAGAATCTGAG GAATGG CT-AGATTTTGACTGG TTTTACTATGTCTCT TERM 2174 1556273 - 1556283 + G 71 -8.2 -3.77014 | opp_overlap 1556273 1556272 1556270 TTGTTTAATGAAGAT GCGG TTT CCGC TTTAGATGCTTTTGT Dhaf_1466 1554980 - 1558258 + | phage tail tape measure protein, TP901 family TERM 2175 1558627 - 1558663 + T 100 -6.5 -5.71983 | opp_overlap 1558629, overlap 1558629 GGAGTAAGAATGGAA AAGCCGGAAACCCGT ATGAATA AAGGGTTGCCGGCTC TTTTTTTGTCCTTGG TERM 2176 1558661 - 1558629 - T 86 -9.1 -4.36729 | opp_overlap 1558627 1558629 AGTAAGAATGGAAAA GCCGGAAACCCGT ATGAATA AAGGGTTGCCGGC TCTTTTTTTGTCCTT TERM 2177 1558629 - 1558661 + T 93 -9.1 -4.48967 | opp_overlap 1558629, overlap 1558627 AGTAAGAATGGAAAA GCCGGAAACCCGT ATGAATA AAGGGTTGCCGGC TCTTTTTTTGTCCTT TERM 2178 1559427 - 1559472 + T 78 -5.5 -5.01535 | opp_overlap 1559432, overlap 1559428 1559432 TTATAGACCCGAATG AAAAAGCGGTTAGGACTTCAT GCTA ATGAAATCTTAACCGCTTAAA TTTTTGTAATTATCA TERM 2179 1559428 - 1559471 + T 75 -9 -3.59837 | opp_overlap 1559432, overlap 1559427 1559432 TATAGACCCGAATGA AAAAGCGGTTAGGACTTCAT GCTA ATGAAATCTTAACCGCTTAA ATTTTTGTAATTATC TERM 2180 1559432 - 1559467 + T 100 -14.2 -3.4968 | opp_overlap 1559432, overlap 1559428 1559427 GACCCGAATGAAAAA GCGGTTAGGACTTCAT GCTA ATGAAATCTTAACCGC TTAAATTTTTGTAAT TERM 2181 1559467 - 1559432 - T 100 -14.2 -4.87291 | opp_overlap 1559432 1559428 1559427 GACCCGAATGAAAAA GCGGTTAGGACTTCAT GCTA ATGAAATCTTAACCGC TTAAATTTTTGTAAT Dhaf_1468 1560569 - 1559493 - | hypothetical protein TERM 2182 1559921 - 1559903 - G 82 -12.4 -3.09965 | overlap 1559901 1559899 1559897 CAAAATAATCATAGA GCCCGGGA ACT TCCCAGGC CAGGGGCAGATGAGC TERM 2183 1561304 - 1561331 + G 74 -2.6 -5.00884 | overlap 1561307 1561313 CCGCTTGCCTACCGC CGTTCCCTACTC CCTT GAGGAAGGAGTG TTTTTTGAAAACCGT Dhaf_1469 1560825 - 1561628 + | glycosyl transferase family 2 TERM 2184 1561638 - 1561679 + T 70 -5.9 -4.39329 | gap 1, opp_overlap 1561639, overlap 1561643 GTATGAACGAGGAAA TTTTAGGGCTCCTTAACACG GAT TGTG-TAAGGAGCCCTTTGG TTTATTCTGTGGGGT TERM 2185 1561643 - 1561674 + T 100 -14.6 -4.25325 | gap 1, opp_overlap 1561639, overlap 1561638 AACGAGGAAATTTTA GGGCTCCTTAACACG GAT TGTG-TAAGGAGCCC TTTGGTTTATTCTGT Dhaf_1470 1563120 - 1561681 - | 40-residue YVTN family beta-propeller repeat protein TERM 2186 1563003 - 1563028 + g 71 -4.5 -4.55491 | opp_overlap 1562992, overlap 1563004 AGTATCCGGGGCCGA TCCCCACGGGA ATCA TCCCGAGGAGC TTTTCTGATTCCATA TERM 2187 1563543 - 1563514 - H 80 -10 -3.69323 | gap 1 TGACTATGAGCGAAA CTGTGCCC-AGGG TATTG CCCGAGGGCACAG GTCTGACGGTTGCCT TERM 2188 1563712 - 1563757 + H 100 -8.5 -5.48825 | gap 1, opp_overlap 1563741 GTGGAGACAAGCCCA GGCGGGTAGGTTTCACTCTT TTTAAGC AAG-GTGGAATCTACCTGTC TTTTTTTCACTAATG TERM 2189 1564711 - 1564701 - g 73 -5.4 -4.64598 | opp_overlap 1564709 GAAGGAGCTGAAAAA GAAG GGA CTTC TTCAGGATCTTGACG TERM 2190 1565296 - 1565286 - g 77 -8.2 -4.22338 | overlap 1565287 AGCAGAAGTGCAAAA GGGG AAT CCCC CCACGGAGAGAAAAA TERM 2191 1567065 - 1567046 - g 71 -7.2 -4.11295 | TCAAAGGGATAGAAA GAGCACAA ATGG TTATGCTC CCCGGCGGTTTCAGT TERM 2192 1567317 - 1567341 + G 89 -12.9 -3.5361 | opp_overlap 1567330, overlap 1567334 CCATGTTTCCTGTAT GGTGCAGACCA AAG TGGTCTCCACC TTATCTCCCTGGTTC TERM 2193 1567545 - 1567519 - g 75 -11.6 -2.57881 | overlap 1567518 GAAGTTCTTTACAAT CCCAACGGCTCC TAT GAAGCCATTGAG GGGATCACCAGTCCG Dhaf_1471 1563829 - 1567683 + | phosphoribosylformylglycinamidine synthase Dhaf_1472 1567734 - 1568228 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Dhaf_1473 1568382 - 1569677 + | adenylosuccinate lyase Dhaf_1474 1569795 - 1570511 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2194 1570783 - 1570771 - g 80 -9.1 -4.16681 | opp_overlap 1570769 1570772 AACAGGACGGTAAAA TGGCC ATC GGCCA TGTCCGTTATTCAAC Dhaf_1475 1570530 - 1571948 + | amidophosphoribosyltransferase Dhaf_1476 1571990 - 1573009 + | phosphoribosylformylglycinamidine cyclo-ligase Dhaf_1477 1573006 - 1573608 + | phosphoribosylglycinamide formyltransferase TERM 2195 1575039 - 1575029 - g 73 -8.2 -3.86015 | opp_overlap 1575029 CAGGCGGGGGATAAA GCCC AAG GGGC TTATCTGGCCTCCGA Dhaf_1478 1573661 - 1575217 + | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 2196 1575776 - 1575752 - f 100 -13.7 -3.89822 | CACGCAGCGGAGAAA GGTTGGAAACA GGA CGTTTCCAACC CGCCATTGAGCAGGA TERM 2197 1575862 - 1575894 + G 71 -10.5 -2.84587 | overlap 1575861 1575855 1575889 GAGAATGACTCAGCG GCGCAGGTCCTTTCG GAG CGGAGGGCTTTGCGC GTTAGTTTTGTCCGC Dhaf_1479 1575754 - 1575972 + | hypothetical protein Dhaf_1480 1576007 - 1577266 + | phosphoribosylamine/glycine ligase Dhaf_1481 1577346 - 1577900 + | manganese containing catalase TERM 2198 1577964 - 1577991 + F 90 -5.7 -5.52986 | opp_overlap 1577968, overlap 1577968 AAATTTGAAAATGCA AAAAGAAGCTT ATCCCC AAGCTTCTTTA TTTTTTTACTAAAAT TERM 2199 1577968 - 1577987 + F 87 -6.5 -5.23943 | opp_overlap 1577968, overlap 1577964 TTGAAAATGCAAAAA GAAGCTT ATCCCC AAGCTTC TTTATTTTTTTACTA TERM 2200 1577987 - 1577968 - f 85 -7.2 -4.87318 | opp_overlap 1577964 1577968 TTGAAAATGCAAAAA GAAGCTTA TCCC CAAGCTTC TTTATTTTTTTACTA Dhaf_1482 1578078 - 1579433 + | major facilitator superfamily MFS_1 Dhaf_1483 1580129 - 1579428 - | hypothetical protein Dhaf_1484 1580338 - 1580757 + | hypothetical protein TERM 2201 1580825 - 1580803 - T 82 -7.7 -4.57209 | gap 1, opp_overlap 1580801 1580798 1580803 ATAGCAATGAGAAAA GCCGC-CCTC AGCT GAGGAACGGC TCTTTCTTTATGAGT Dhaf_1485 1581700 - 1580855 - | lipoprotein, YaeC family Dhaf_1486 1582562 - 1581885 - | binding-protein-dependent transport systems inner membrane component Dhaf_1487 1583577 - 1582555 - | ABC transporter related TERM 2202 1583632 - 1583621 - H 82 -2.2 -5.64304 | opp_overlap 1583627 1583629 GAATATAACAAAAAA CTCC ACGA GGAA ATCCGCAGAGTTATA Dhaf_1488 1583957 - 1584298 + | TrpR like protein, YerC/YecD Dhaf_1489 1584300 - 1585451 + | Histidine--tRNA ligase TERM 2203 1585628 - 1585679 + F 100 -12 -3.75378 | overlap 1585629 1585632 1585639 GTGTAACTTAAGTTT TTGAGACCAAATATATGTTTAG TAGTTGAT CTGAACATATGTTTGGTCTTAG TTATATTATGACAAT TERM 2204 1585629 - 1585678 + F 93 -13.3 -2.84745 | overlap 1585628 1585632 1585639 TGTAACTTAAGTTTT TGAGACCAAATATATGTTTAG TAGTTGAT CTGAACATATGTTTGGTCTTA GTTATATTATGACAA TERM 2205 1585632 - 1585675 + F 100 -12.8 -3.56569 | overlap 1585629 1585628 1585639 AACTTAAGTTTTTGA GACCAAATATATGTTTAG TAGTTGAT CTGAACATATGTTTGGTC TTAGTTATATTATGA TERM 2206 1585979 - 1585949 - g 100 -12.7 -4.26344 | AGAGCTTGACGAAAA TTCAGTATGTCGG GAATT CCGACATACTGGA ACTGATGGGAAAGAG Dhaf_1490 1585725 - 1586759 + | hypothetical protein TERM 2207 1587117 - 1587158 + F 100 -24.7 -3.82084 | opp_overlap 1587129 CGGTATTGATTTTAG CATGTCCCAGAACACGACA ACGT TGTCGCGTTCTGGGACATG TTGTTACTCTTACAG TERM 2208 1587614 - 1587625 + G 76 -7.2 -4.48072 | TTTGGATCTTGGTTT CGGC TATT GCCG TTTTGTCGTAGCTAT Dhaf_1491 1587336 - 1588007 + | ATP phosphoribosyltransferase Dhaf_1492 1588043 - 1589323 + | Histidinol dehydrogenase TERM 2209 1589842 - 1589817 - g 71 -8.3 -3.68222 | gap 1, opp_overlap 1589822 CTGCAATCCCAATAA CCCTACGGGAAC CCT GTTCCC-TCGGG AAGAGATACTGAGAA Dhaf_1493 1589317 - 1590399 + | histidinol-phosphate aminotransferase Dhaf_1494 1590449 - 1591033 + | Imidazoleglycerol-phosphate dehydratase TERM 2210 1591241 - 1591226 - gf 71 -4.6 -4.63486 | opp_overlap 1591226, overlap 1591230 AGCTCTTGAAGAAAA GGGATG GATT CAGCCC TTAATCCACTACGCC Dhaf_1495 1591050 - 1591685 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Dhaf_1496 1591651 - 1592403 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Dhaf_1497 1592425 - 1593186 + | imidazoleglycerol phosphate synthase, cyclase subunit Dhaf_1498 1593243 - 1593923 + | phosphoribosyl-ATP diphosphatase TERM 2211 1593940 - 1593977 + F 89 -3.5 -5.63504 | gap 2, opp_overlap 1593940 1593941 1593951 1593966, overlap 1593966 CAGGCACACAAAGAA TCCTTGCAAAGGGGAGC GCGAAG GCA-CCC-TTGCAGGGA TTTTTTTGTAGGGTT TERM 2212 1594163 - 1594146 - f 100 -12.7 -4.28254 | TTCTAACACTTAAAA CTCGCCG TGCC CGGCGAG GGAAATTTGCGCAGG Dhaf_1499 1594204 - 1595346 + | ApbE family lipoprotein Dhaf_1500 1595385 - 1595774 + | protein of unknown function DUF1312 Dhaf_1501 1595767 - 1596390 + | Heptaprenyl diphosphate synthase component I TERM 2213 1596643 - 1596657 + G 75 -5.6 -4.68506 | opp_overlap 1596643 TAAGTGCTTATTTAA TCCTGG TTG CCTGGA TTTTTAAGATTAATT TERM 2214 1596818 - 1596828 + G 82 -5.4 -5.05228 | GGCGGTTTTGCTAAG GCTT TTC AAGC TTTTTGTGATTTGGT Dhaf_1502 1596492 - 1597277 + | cobalt transport protein TERM 2215 1597318 - 1597355 + F 100 -14.9 -5.35354 | gap 1, opp_overlap 1597318 AAAGTAATCGAAAAA CAGCGGGTAAGGGTTCCC AAG GGGATTCCT-GCCCGCTG TTTTTTAATTGTGTC TERM 2216 1597355 - 1597318 - f 100 -10.5 -4.788 | gap 1, opp_overlap 1597318 AAAGTAATCGAAAAA CAGCGGGTAAGGGTTCCC AAG GGGATTCCTG-CCCGCTG TTTTTTAATTGTGTC TERM 2217 1598037 - 1598016 - g 75 -5.8 -4.56914 | GTAGCCAAAGGAAAA GCTCAGGC TGAGTG GCATGAGC AAGCTCAAAAAGCCG TERM 2218 1598359 - 1598343 - g 74 -9.5 -3.55622 | opp_overlap 1598345 GTTAACGGCGGCAAA GATAAGG ACA CCTTATC TGCTGACGGGGAATA Dhaf_1503 1597704 - 1598951 + | hypothetical protein TERM 2219 1598980 - 1599007 + F 100 -11.4 -4.76087 | opp_overlap 1598975 1598980 1598984 1598987 AGAATACTAAGACCA TGAAGAAGCGGT TTCG GCTGCTTCTTCA TTTCTTTCTTCTATA Dhaf_1504 1599098 - 1600198 + | ApbE family lipoprotein TERM 2220 1600202 - 1600236 + T 100 -12.3 -3.90922 | gap 1, opp_overlap 1600196 1600202 1600205, overlap 1600205 GAAAGCAAATGACAA CAAGAGGGCATCTCAA TAAT TGGAGA-GCCCTCTTG TTCTTTAAGGGAAAT TERM 2221 1600236 - 1600202 - T 100 -12.3 -3.66643 | gap 1, opp_overlap 1600202 1600205, overlap 1600196 1600205 GAAAGCAAATGACAA CAAGAGGGCATCTCAA TAAT TGGAGA-GCCCTCTTG TTCTTTAAGGGAAAT TERM 2222 1600205 - 1600233 + T 79 -8.2 -4.08557 | gap 1, opp_overlap 1600202 1600196 1600205, overlap 1600202 AGCAAATGACAACAA GAGGGCATCTCAA TAAT TGGAGA-GCCCTC TTGTTCTTTAAGGGA TERM 2223 1600233 - 1600205 - T 77 -8.2 -3.93819 | gap 1, opp_overlap 1600205 1600202, overlap 1600202 1600196 AGCAAATGACAACAA GAGGGCATCTCAA TAAT TGGAGA-GCCCTC TTGTTCTTTAAGGGA Dhaf_1505 1602033 - 1600288 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2224 1601105 - 1601144 + g 93 -11.4 -4.46404 | gap 1, overlap 1601096 1601095 1601099 TTATCCGCTGCAATG CGGCCTTGCTTGTTGGCCG GGC CGGCCAG-AGGAATGGCCG TTTTCGTCTTGGTTA Dhaf_1506 1602336 - 1602052 - | transcriptional regulator, ArsR family TERM 2225 1602999 - 1603009 + G 77 -6.8 -4.63218 | opp_overlap 1602999 1602998 TCCGGTAAGAAAACG GCTG GCT CAGC TTTTGTTCGCCAGCA Dhaf_1507 1602520 - 1603203 + | transcriptional regulator, Crp/Fnr family TERM 2226 1603265 - 1603236 - f 100 -11.5 -4.45577 | gap 1, opp_overlap 1603236 ATAAAGCTTAGAAAA GGTGAAG-GCAGGC ATA GCTTGCGCTTCACC TTTTTTTAAATCAGC TERM 2227 1603236 - 1603265 + F 100 -13.7 -5.47218 | gap 1, opp_overlap 1603236 ATAAAGCTTAGAAAA GGTGAAG-GCAGGC ATA GCTTGCGCTTCACC TTTTTTTAAATCAGC TERM 2228 1604235 - 1604271 + G 83 -9.5 -4.2679 | ACTGCGGAGGAACTT GATAGTGAGCTGCAG CAAGGGC CTGCAGAGCACTATC TTTTGGTGGACATTC Dhaf_1508 1603557 - 1604615 + | Rhodanese domain protein TERM 2229 1605028 - 1604974 - g 95 -8.4 -5.18726 | overlap 1604977 1604978 TGTGGATAACAAAAA CAATTTCCAACCCATCACCTGGGAGG AGG CCTTCCAGGAGGTGGGTGCGAAGATG AAAGCCATCGTTGAA TERM 2230 1605025 - 1604977 - g 88 -8.7 -4.68512 | overlap 1604974 1604978 GGATAACAAAAACAA TTTCCAACCCATCACCTGGGAGG AGG CCTTCCAGGAGGTGGGTGCGAAG ATGAAAGCCATCGTT TERM 2231 1605024 - 1604978 - g 85 -12.2 -3.39481 | overlap 1604977 1604974 GATAACAAAAACAAT TTCCAACCCATCACCTGGGAGG AGG CCTTCCAGGAGGTGGGTGCGAA GATGAAAGCCATCGT TERM 2232 1605385 - 1605402 + G 74 -4 -4.86385 | ATGGATTCCCATTCG GCCCGG CACAGA CCTGGC TTTCTTTTTAGGAAT TERM 2233 1606229 - 1606207 - g 83 -9.8 -4.28774 | TTATGGAATCGAAAA CCTCTACGGC TAT ACCGTGGAGG AAGAATTGGAGGTGG TERM 2234 1606402 - 1606425 + G 71 -10.2 -2.78384 | opp_overlap 1606394, overlap 1606400 AAAAGAAGGATACCT GGGTGTACCC ACTT GGGTGCCCCC TCTAGTGGAGCCGGC Dhaf_1509 1604642 - 1606840 + | Formate dehydrogenase Dhaf_1510 1606840 - 1607388 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1511 1607401 - 1608549 + | Polysulphide reductase NrfD Dhaf_1512 1608570 - 1609238 + | hypothetical protein Dhaf_1513 1609284 - 1610180 + | Rhodanese domain protein TERM 2235 1610290 - 1610327 + F 100 -18.6 -3.05844 | opp_overlap 1610295, overlap 1610295 TGTAACATTTATGGC TTAAACAGGCCGCCGT TCAACT ACGGCGGCCTGTTTCA TGTTAAGCTGAAAGG TERM 2236 1610295 - 1610322 + F 100 -18.5 -3.93038 | opp_overlap 1610295, overlap 1610290 CATTTATGGCTTAAA CAGGCCGCCGT TCAACT ACGGCGGCCTG TTTCATGTTAAGCTG TERM 2237 1610322 - 1610295 - f 100 -18.5 -3.55761 | opp_overlap 1610295 1610290 CATTTATGGCTTAAA CAGGCCGCCGT TCAACT ACGGCGGCCTG TTTCATGTTAAGCTG Dhaf_1514 1610418 - 1612685 + | ATP-dependent DNA helicase PcrA TERM 2238 1612791 - 1612772 - g 90 -2.8 -5.75945 | ACGTGTCAAAAAAAA TCCATGTC GTAG GTCATAGA AACCCGGATACCGAT TERM 2239 1613691 - 1613674 - g 79 -9.9 -3.92542 | opp_overlap 1613672, overlap 1613678 CTGAGCCGGAAACAA GTGATCC TCGT GGATCAC AATGAATTTGGCCAA TERM 2240 1613903 - 1613917 + G 71 -4.2 -4.70659 | TGCTGGGAGCTATTT TATCCG ATA CGGTTA TTTTTAAATCTCCCA Dhaf_1515 1612759 - 1614393 + | Inorganic diphosphatase Dhaf_1516 1614862 - 1614578 - | hypothetical protein TERM 2241 1614688 - 1614706 + g 70 -2.3 -4.90525 | overlap 1614645 1614642 TCCAACCCGACTCCG CTGCGTG CTTTT CGCGAAG TTTTGTTTCCGCTTG Dhaf_1517 1615305 - 1617284 + | DNA ligase, NAD-dependent Dhaf_1518 1617403 - 1617687 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 2242 1618539 - 1618504 - g 71 -4.8 -4.56597 | gap 1 GCGGTCTTTGAAAAA CCGGATTATACCCAATT CTT AACCGAGGAT-ATCCGG GGCTTACGAATCGGT Dhaf_1519 1617769 - 1619244 + | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 2243 1620222 - 1620244 + G 81 -3.3 -5.52384 | gap 1, opp_overlap 1620209, overlap 1620223 GACGCAGGAGTGCTT ACCG-CGGCG AAAG CGCTGTCGGA TTTTTTTGATGAAGC Dhaf_1520 1619244 - 1620698 + | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 2244 1620770 - 1620737 - f 83 -8.9 -4.08394 | gap 1, opp_overlap 1620728 1620737 AGATTTGCTTGAAAA GCTTCCTTTCC-GGAC ATG GTCTTGGAAGGGAAGC TTTATTAGCGAGATG TERM 2245 1620737 - 1620770 + F 100 -13.3 -4.1552 | gap 1, opp_overlap 1620737, overlap 1620728 AGATTTGCTTGAAAA GCTTCCTTTCC-GGAC ATG GTCTTGGAAGGGAAGC TTTATTAGCGAGATG Dhaf_1521 1621168 - 1621989 + | methyl-accepting chemotaxis sensory transducer TERM 2246 1621997 - 1622035 + F 73 -6 -4.43351 | overlap 1621994 AGCTATAAGCAATGG GGCTTCTTTTCTGGAGTA TAA TCCGACAGAAAGGAAGTC TTGTTTTTGCACTAT TERM 2247 1622135 - 1622149 + F 88 -7 -5.18297 | opp_overlap 1622137, overlap 1622137 AGTATGCGTTTAAGG CACGGC GAA GCCGGG TTTTCTTTATTATTC Dhaf_1522 1622273 - 1623436 + | homocitrate synthase Dhaf_1523 1623452 - 1624663 + | isocitrate dehydrogenase, NADP-dependent TERM 2248 1624670 - 1624713 + F 80 -9.7 -3.67878 | gap 1, opp_overlap 1624671 1624676, overlap 1624671 1624677 1624688 1624691 CGCCCATAGGCCAAG AGGAAAGGTTCCCCTATCTC TGCCT GAGATAAGGG-GCCTTTCCC TTATCTTAGGATGAT TERM 2249 1624671 - 1624712 + F 91 -13.2 -2.80245 | gap 1, opp_overlap 1624671 1624676, overlap 1624670 1624677 1624688 1624691 GCCCATAGGCCAAGA GGAAAGGTTCCCCTATCTC TGCCT GAGATAAGGG-GCCTTTCC CTTATCTTAGGATGA TERM 2250 1624712 - 1624671 - f 95 -13.2 -3.07962 | gap 1, opp_overlap 1624671 1624670 1624677 1624688 1624691, overlap 1624676 GCCCATAGGCCAAGA GGAAAGGTTCCCCTATCTC TGCCT GAGATAAGGGG-CCTTTCC CTTATCTTAGGATGA TERM 2251 1624688 - 1624727 + F 79 -10.8 -3.10164 | opp_overlap 1624676 1624671, overlap 1624677 1624671 1624670 1624691 AAAGGTTCCCCTATC TCTGCCTGAGATAAGGGG CCTT TCCCTTATCTTAGGATGA TTCAGTGCTCAATGA TERM 2252 1624691 - 1624724 + F 77 -11.1 -2.76263 | opp_overlap 1624676 1624671, overlap 1624677 1624671 1624670 1624688 GGTTCCCCTATCTCT GCCTGAGATAAGGGG CCTT TCCCTTATCTTAGGA TGATTCAGTGCTCAA Dhaf_1524 1624787 - 1626064 + | hypothetical protein Dhaf_1525 1626172 - 1627599 + | Na+/solute symporter TERM 2253 1627642 - 1627626 - f 100 -13.7 -4.38712 | opp_overlap 1627626 TGTATGTGTATAAAA CCGAGGC TGG GCCTCGG TTTTTTGGTTGTCGG TERM 2254 1627626 - 1627642 + F 100 -13.7 -5.32944 | opp_overlap 1627626 TGTATGTGTATAAAA CCGAGGC TGG GCCTCGG TTTTTTGGTTGTCGG Dhaf_1526 1627887 - 1628141 + | hypothetical protein TERM 2255 1628191 - 1628220 + F 80 -10.1 -3.65991 | opp_overlap 1628190 1628197, overlap 1628197 CAGACCCGACTACAG GTCAAATGTTGCA GCGC TGCATCATTTGGC TTATATTCAACGGCT TERM 2256 1628568 - 1628526 - f 80 -6.1 -4.80736 | opp_overlap 1628532, overlap 1628527 1628532 TAGTAAAGAAATAAA GCAAAAGCTGGCAGCCGCG AAGAA CGTGGCAGCCGGCTTTTTT GCAGAAAGGGGCAAA TERM 2257 1628567 - 1628527 - f 76 -9.6 -3.46815 | opp_overlap 1628532, overlap 1628526 1628532 AGTAAAGAAATAAAG CAAAAGCTGGCAGCCGCG AAGAA CGTGGCAGCCGGCTTTTT TGCAGAAAGGGGCAA TERM 2258 1628532 - 1628562 + F 100 -13.9 -5.00616 | opp_overlap 1628527 1628526 1628532 AGAAATAAAGCAAAA GCTGGCAGCCGCG AAGAA CGTGGCAGCCGGC TTTTTTGCAGAAAGG TERM 2259 1628562 - 1628532 - f 100 -9.5 -4.74219 | opp_overlap 1628532, overlap 1628527 1628526 AGAAATAAAGCAAAA GCTGGCAGCCGCG AAGAA CGTGGCAGCCGGC TTTTTTGCAGAAAGG TERM 2260 1628694 - 1628684 - f 86 -6.8 -5.04601 | TTGACAAATTAAAAA GGAG TAC CTCC CCAACATCTCGAAAT Dhaf_1527 1628760 - 1630118 + | transposase IS1182 family protein TERM 2261 1630758 - 1630746 - g 74 -4.1 -4.93296 | overlap 1630748 GGAGTATGAGAAAAA CAGAA AGA CTCTG GTGGCCAACATCTCC Dhaf_1528 1630267 - 1631436 + | histidine kinase Dhaf_1529 1631512 - 1632198 + | two component transcriptional regulator, winged helix family Dhaf_1530 1632225 - 1632467 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 2262 1632488 - 1632505 + F 73 -8.5 -3.5936 | opp_overlap 1632488 TAATGCCATTTGAAA TTCCCAA ACGT TTGGGAA TTTCGGAGCTTTAGA TERM 2263 1632505 - 1632488 - f 73 -8.5 -3.61103 | opp_overlap 1632488 TAATGCCATTTGAAA TTCCCAA ACGT TTGGGAA TTTCGGAGCTTTAGA TERM 2264 1632559 - 1632598 + F 76 -10.8 -2.70946 | opp_overlap 1632561 1632588, overlap 1632558 1632556 AACGAAACCATGTGA AATGCCCCAAATTTCCAA GCGC TTGGAAACTTGGGGCAAG ATATTTATCAGAAGG TERM 2265 1632596 - 1632561 - f 100 -20 -3.65353 | opp_overlap 1632559 1632558 1632556, overlap 1632588 CGAAACCATGTGAAA TGCCCCAAATTTCCAA GCGC TTGGAAACTTGGGGCA AGATATTTATCAGAA Dhaf_1531 1632818 - 1633321 + | hypothetical protein TERM 2266 1633624 - 1633604 - f 71 -4.6 -4.61231 | overlap 1633608 GGATAGCCGTAAAAA GGAAGCGG GAAAG CCGCTCAC ATGTGGCAGAGTCTG Dhaf_1532 1633737 - 1634699 + | RNA-directed DNA polymerase Dhaf_1533 1635272 - 1637095 + | RNA-directed DNA polymerase TERM 2267 1637138 - 1637192 + F 72 -9.9 -2.80016 | gap 1, opp_overlap 1637154 TAAGTACGGTTCGGG GGC-GAGCATCCGGAAACCTGCCGCA GCAA TGCGGCAAGGCGCTGGGTGCTTAGCC TACTTCATCGTCGGA TERM 2268 1637175 - 1637154 - f 100 -12.3 -3.58343 | opp_overlap 1637138 GCGAGCATCCGGAAA CCTGCCGCA GCAA TGCGGCAAG GCGCTGGGTGCTTAG TERM 2269 1638903 - 1638893 - f 81 -5.4 -5.16237 | AAGTTTAGGAAAAAA CTGA ATA TCAG GCGGAATAGGGTTGC TERM 2270 1639152 - 1639170 + F 95 -7.4 -5.55769 | ACATGACGTCTGCCA GAGCCG AATACAC CGGCTC TTTTTTATTATCGGA TERM 2271 1639790 - 1639800 + G 71 -6.8 -4.24342 | CAGAGCCAAGGGCTA CGGT GTT ACCG TTTATTGCTCCGAGC Dhaf_1536 1639227 - 1639883 + | hypothetical protein TERM 2272 1639872 - 1639896 + F 84 -6.5 -5.03314 | ACATTTACCGAGATT GAAGTGCTT TGATATC AGGCACTTC TTTTTTGAGCATAAA TERM 2273 1640211 - 1640238 + F 85 -5.6 -5.13344 | gap 1, overlap 1640202 1640201 TGTTTTCGTCATCAG GCGGTTTTGCTTT AGA AAGGCAGG-CCGC TTTTTCTGTTGGTAT TERM 2274 1640569 - 1640554 - g 73 -4.6 -4.66953 | GGAACAGGCTAAAAA GCTGCT TGAG AGCGGC AGCCGGGTGCTGGCT TERM 2275 1641355 - 1641345 - g 73 -8.2 -3.80841 | overlap 1641346 ATGAGGATTACCAAA GCGG AAT CCGC TCCGGCCGTCATGCT Dhaf_1537 1640276 - 1641586 + | molybdopterin binding domain protein Dhaf_1538 1641601 - 1642380 + | Nitrogenase TERM 2276 1642358 - 1642397 + F 100 -13 -3.93262 | gap 1, opp_overlap 1642362 1642382 CAGTGGATAAGTCAA CTAAGCCTCAGGTGGAGTT TTA AACTCCACCTGAAGCA-AG TTTCCTATATTGAGG TERM 2277 1642394 - 1642362 - f 100 -21.5 -3.41978 | opp_overlap 1642358, overlap 1642382 GGATAAGTCAACTAA GCCTCAGGTGGAGTT TTA AACTCCACCTGAAGC AAGTTTCCTATATTG Dhaf_1539 1642422 - 1643663 + | hypothetical protein TERM 2278 1644290 - 1644269 - g 84 -12.9 -3.1886 | opp_overlap 1644261 ACGGAACTGGATCAA CTGCGGCGG GCTC CCGCCGCGG AGGTCAATCTGGTGG TERM 2279 1644871 - 1644859 - g 75 -7.7 -4.20696 | CGAGGAATTTGAAAA GCTCA TTT TGAGC TGGAGTGACGGCAAT Dhaf_1540 1643669 - 1644889 + | hypothetical protein Dhaf_1541 1644922 - 1646124 + | molybdenum cofactor synthesis domain protein Dhaf_1542 1646160 - 1647182 + | transport system permease protein TERM 2280 1647725 - 1647711 - g 71 -2.8 -4.9445 | ATAACCAAGTAAAAA TGCTCA AGG TGATCA AAGCCTTGGCTGAGC Dhaf_1543 1647182 - 1647970 + | ABC transporter related TERM 2281 1648206 - 1648220 + G 79 -10 -3.86015 | overlap 1648199 ACCTTCGGCTCCATC GGCGTT CTT AACGCC TTTGTGGAAACCCTG Dhaf_1544 1647996 - 1649078 + | periplasmic binding protein TERM 2282 1649111 - 1649153 + F 83 -11.3 -3.05384 | opp_overlap 1649113 GCAGCCGTTGCAACC CAGTAGCTCTGCGTTGACG CTGTA CGTTTACGCAGAGCTACAA TTCAATACAGCGGGA TERM 2283 1649151 - 1649113 - f 100 -16.8 -2.52543 | opp_overlap 1649111 AGCCGTTGCAACCCA GTAGCTCTGCGTTGACGC TGT ACGTTTACGCAGAGCTAC AATTCAATACAGCGG TERM 2284 1649230 - 1649246 + G 71 -7.3 -4.09685 | opp_overlap 1649229 TCCGAATTTAACCAG TGAGCAG GCT TTGCTCA TTTTGCAAAGTGCCC Dhaf_1545 1649210 - 1650223 + | Radical SAM domain protein Dhaf_1546 1651409 - 1650177 - | tyrosyl-tRNA synthetase TERM 2285 1651475 - 1651445 - R 100 -13.4 -6.01725 | opp_overlap 1651445 1651470, overlap 1651470 AATAAAAACAAAAAA CTCCCGTCCTTC ATTGCCA GAAGGACGAGAG TATGCTCCCGTGTTA TERM 2286 1651445 - 1651475 + r 77 -11.2 -2.8092 | opp_overlap 1651445 1651470, overlap 1651470 AATAAAAACAAAAAA CTCCCGTCCTTC ATTGCCA GAAGGACGAGAG TATGCTCCCGTGTTA TERM 2287 1652005 - 1651974 - R 100 -13.8 -4.6644 | opp_overlap 1651981, overlap 1651976 AATAGAGCGTAAAAA TACTAAAGGCCAGC GTTT GCTGGCCTTTAGCG GCAGTTATTTATCGT TERM 2288 1652003 - 1651976 - R 100 -18.6 -3.93817 | opp_overlap 1651981, overlap 1651974 TAGAGCGTAAAAATA CTAAAGGCCAGC GTTT GCTGGCCTTTAG CGGCAGTTATTTATC TERM 2289 1651981 - 1651998 + r 100 -12.7 -3.54638 | opp_overlap 1651976 1651974 CGTAAAAATACTAAA GGCCAGC GTTT GCTGGCC TTTAGCGGCAGTTAT Dhaf_1547 1652160 - 1652014 - | hypothetical protein TERM 2290 1652655 - 1652642 - g 74 -6.7 -4.37506 | ATCAGTAAAGATAAA TTGGC GCTG GCCAA GGATATTATGGAAAA TERM 2291 1652733 - 1652715 - g 93 -7.4 -5.4833 | GTATTCAAGAAAAAA CCTGCTTT ATT ATAGCAGG CGATGTGGCCTATGA TERM 2292 1653159 - 1653134 - g 100 -15.5 -3.81488 | TCCCTGGAAAGAGAA CAGGCCAGGAA ACGG CTCCTGGCCTG TAGGGATTCAATTAA Dhaf_1548 1652333 - 1653232 + | hypothetical protein Dhaf_1549 1654060 - 1653245 - | glucosamine-6-phosphate isomerase TERM 2293 1653898 - 1653872 - G 79 -9.5 -3.84825 | opp_overlap 1653872 1653883 TTCATCCAGATTAAA GGTCTTGACTT GGGAA AAGTCAAGGCC TTCTTCCTTATGTTT TERM 2294 1653872 - 1653898 + g 88 -11.7 -3.90608 | opp_overlap 1653872, overlap 1653883 TTCATCCAGATTAAA GGTCTTGACTT GGGAA AAGTCAAGGCC TTCTTCCTTATGTTT TERM 2295 1654464 - 1654477 + G 70 -9.5 -3.2056 | CTTCCCAGGTTTTGA GCCGG CAGG CCGGC TTGATCCCTGTAAGT Dhaf_1550 1654337 - 1655578 + | efflux transporter, RND family, MFP subunit Dhaf_1551 1655562 - 1656296 + | ABC transporter related Dhaf_1552 1656293 - 1657486 + | protein of unknown function DUF214 TERM 2296 1657520 - 1657548 + F 77 -8.2 -3.96531 | gap 1, opp_overlap 1657512 1657514 1657520 GAATAAGCAGTAAAA TCCCCTG-CGG AGATTAAA CCGGCAGGGGA TTTCTCACTATGTAA TERM 2297 1657548 - 1657520 - f 82 -8.2 -4.39133 | gap 1, opp_overlap 1657520, overlap 1657512 1657514 GAATAAGCAGTAAAA TCCCCTG-CGG AGATTAAA CCGGCAGGGGA TTTCTCACTATGTAA Dhaf_1553 1657709 - 1658569 + | alpha/beta hydrolase fold protein Dhaf_1554 1658647 - 1659462 + | prolipoprotein diacylglyceryl transferase TERM 2298 1659687 - 1659677 - g 71 -8.2 -3.65294 | overlap 1659673 TTCGAGATAAATTAA CCGG CAG CCGG ACTAAAGTCAGGGTC Dhaf_1555 1659535 - 1660740 + | Saccharopine dehydrogenase Dhaf_1556 1660745 - 1661875 + | carboxynorspermidine decarboxylase TERM 2299 1661881 - 1661933 + F 100 -12.8 -3.68435 | gap 1, opp_overlap 1661887 1661888 1661902, overlap 1661888 ATTATCTTAGCTGGA GCAGAAGGGCCTGTCACCAAACGTT TGCA AACGTGGGGCGGCAGGCC-TTTTGC TATTCTTTTAGGCGG TERM 2300 1661928 - 1661887 - f 76 -9.3 -3.41051 | opp_overlap 1661881 1661888, overlap 1661888 1661902 TTAGCTGGAGCAGAA GGGCCTGTCACCAAACGTT TGCA AACGTGGGGCGGCAGGCCT TTTGCTATTCTTTTA TERM 2301 1661888 - 1661927 + F 100 -12.8 -4.53703 | opp_overlap 1661887 1661888 1661902, overlap 1661881 TAGCTGGAGCAGAAG GGCCTGTCACCAAACGTT TGCA AACGTGGGGCGGCAGGCC TTTTGCTATTCTTTT TERM 2302 1661927 - 1661888 - f 91 -12.8 -2.64416 | opp_overlap 1661888 1661881, overlap 1661887 1661902 TAGCTGGAGCAGAAG GGCCTGTCACCAAACGTT TGCA AACGTGGGGCGGCAGGCC TTTTGCTATTCTTTT Dhaf_1557 1662083 - 1662994 + | hypothetical protein TERM 2303 1663019 - 1663008 - f 82 -3 -5.44721 | overlap 1663011 AGGATGTGAAAAAAA CATT GACA AATG GTCACCCATAGTATA TERM 2304 1663462 - 1663439 - g 71 -7.4 -4.12188 | overlap 1663444 CCATGACCTTTAAAA CGAAAGCAAG CATA CTGGCCTTCG CGTCAGCCATGCTTC Dhaf_1558 1663219 - 1663605 + | protein of unknown function DUF454 Dhaf_1559 1663705 - 1664298 + | hypothetical protein Dhaf_1560 1664295 - 1665959 + | ABC transporter related TERM 2305 1665982 - 1666000 + F 100 -13.2 -4.90266 | opp_overlap 1665986 GATAAAGACAGTTTA GGAATGCC GGC GGCATTCC TTTTTGCTTCCTCAA TERM 2306 1666198 - 1666214 + G 76 -9.5 -3.71848 | opp_overlap 1666197 TTTTCTGGAAACGAT TGAGGAT ATG ATCCTCA TTATTAATCGGGAAG TERM 2307 1666420 - 1666408 - g 100 -9.1 -5.40072 | overlap 1666385 1666384 1666411 GTCCCTGGAAAAAAA GGAGG GAA CCTCC ATCCCTGCAAAAGCG Dhaf_1561 1666160 - 1667527 + | response regulator receiver modulated diguanylate cyclase TERM 2308 1668149 - 1668162 + G 70 -8.1 -3.84406 | opp_overlap 1668146, overlap 1668157 TGCTCAATACGATTG GCAGC TGAT GCTGC TTATTATCCTGGGCG Dhaf_1562 1667637 - 1668446 + | Abortive infection protein TERM 2309 1668565 - 1668549 - f 100 -8.1 -5.41359 | opp_overlap 1668549 AATTAAATTAAAAAA TTGTAGA CAA TCTACAA TTTAAAAAGGAAATT Dhaf_1563 1668608 - 1668805 + | hypothetical protein TERM 2310 1669142 - 1669128 - g 73 -2.1 -5.03314 | CTTATTTTTAAAAAA TCCCT TTTAC AGGAA CAGGAATTAGATTAT Dhaf_1564 1668795 - 1669511 + | transcriptional regulator, GntR family TERM 2311 1669593 - 1669561 - f 100 -8.5 -4.78149 | opp_overlap 1669563, overlap 1669563 GCTATAATGTAAAAA GAGATATCCAAAGGC GGC GACCTTGGATATCTT TTTTAGATCTTAGGG TERM 2312 1669591 - 1669563 - f 90 -11.1 -4.00465 | opp_overlap 1669563, overlap 1669561 TATAATGTAAAAAGA GATATCCAAAGGC GGC GACCTTGGATATC TTTTTTAGATCTTAG TERM 2313 1669563 - 1669591 + F 100 -8.9 -5.1615 | opp_overlap 1669563 1669561 TATAATGTAAAAAGA GATATCCAAAGGC GGC GACCTTGGATATC TTTTTTAGATCTTAG Dhaf_1565 1669716 - 1670876 + | amidohydrolase Dhaf_1566 1670996 - 1671361 + | hypothetical protein TERM 2314 1671375 - 1671404 + F 80 -6.3 -4.82667 | opp_overlap 1671375, overlap 1671376 GATCACCCAAAAAGC TTCCGGTCTCAGG GCAA TCTGTGGCCGGAC TTTTTCATGTACTGA TERM 2315 1671376 - 1671403 + F 78 -9.8 -3.48877 | opp_overlap 1671375, overlap 1671375 ATCACCCAAAAAGCT TCCGGTCTCAGG GCAA TCTGTGGCCGGA CTTTTTCATGTACTG TERM 2316 1671469 - 1671485 + F 72 -6.5 -4.40804 | TTTTGTTATTTAATG GCTATCC GAT GGAGAGC TTTTATGGCATAATG TERM 2317 1673150 - 1673180 + G 70 -2.4 -4.99043 | CAGCGAAAAAAATCA GGCTGATCAATAGG GTT CCTGAGGATTTGCC TTTTGTTTATGCGGA TERM 2318 1673612 - 1673584 - g 90 -13.9 -3.22388 | overlap 1673571 TACCCAATGGATGAA CCCTGGGGCAG GACGGAG CTGCCCCAAGG GGGCACGGGCAAGTT Dhaf_1567 1671565 - 1674615 + | signal transduction histidine kinase, LytS TERM 2319 1675164 - 1675180 + G 79 -3.7 -5.26875 | opp_overlap 1675141 1675164, overlap 1675159 TGGAAAAACTCCAAA GCCAA GGAGGTA TTGGC TTTTTTGGTTCACAA Dhaf_1568 1674708 - 1675574 + | response regulator receiver and SARP domain protein TERM 2320 1675648 - 1675679 + F 100 -18.2 -3.85567 | opp_overlap 1675648 AAGGGTTTAAGTTAA TTACCCCATAGGAC ATAA GTCCTGTGGGGTAA TTTCCATTTAGGGTT TERM 2321 1675679 - 1675648 - f 100 -16 -3.17571 | opp_overlap 1675648 AAGGGTTTAAGTTAA TTACCCCATAGGAC ATAA GTCCTGTGGGGTAA TTTCCATTTAGGGTT TERM 2322 1675895 - 1675923 + F 90 -7.4 -5.18726 | gap 1 AAAAACCTTATGGTA CCGCCATCACCTA ATAA TCGG-GGTGGCGG TTTTTCTTATGCGGA TERM 2323 1676691 - 1676701 + G 71 -4 -4.66264 | opp_overlap 1676679, overlap 1676679 1676671 TGATGGCGGTATCGT CATT ATC AATG TTTTTCGCCCTTTTG Dhaf_1569 1676269 - 1677045 + | Methyltransferase type 12 TERM 2324 1677257 - 1677215 - g 100 -9.2 -4.67904 | overlap 1677218 GACCAATCCCAAAAA CAG-CCCAACCCCCGAAGCG GCTAT CGCC-CGGGCATTGGGGCTG GCGGAAAACGAGATT TERM 2325 1677770 - 1677792 + G 79 -9.8 -3.85817 | opp_overlap 1677769 1677770 ATATTTCCTGGAAAG TGCCGTGGGT ACA ACCTTCGGCA TTTATCCGGAGCGGT TERM 2326 1678127 - 1678149 + G 74 -11.2 -2.81289 | opp_overlap 1678125, overlap 1678126 1678123 1678147 CAGGGTTAACCCATC CGGAGCCGGG TCA CCCGGTTCGG CTATTTTAAAATTCG Dhaf_1570 1677033 - 1678193 + | hypothetical protein Dhaf_1571 1679127 - 1678327 - | N-acetyltransferase Dhaf_1572 1679411 - 1679743 + | hypothetical protein Dhaf_1573 1679745 - 1679936 + | transcriptional regulator, XRE family TERM 2327 1680124 - 1680097 - g 76 -11.2 -3.21747 | gap 1, opp_overlap 1680091 GCAGTTCAGGAGCAA GCCTGGCCGGTGA TTG CCGCCGGCC-GGC ATACGCTGGTATCCG TERM 2328 1681209 - 1681219 + G 71 -8.2 -3.65827 | overlap 1681206 1681211 1681212 AATCGAGTACTCCCG GCCG CCC CGGC TTTGCCTGGACATTC TERM 2329 1681577 - 1681587 + G 73 -4.6 -4.7254 | TCTTTGAATCGAGGC TCGG GGA CCGG TTTTTGCTGGGCACT Dhaf_1574 1680007 - 1684146 + | DEAD/H associated domain protein TERM 2330 1684180 - 1684214 + F 89 -6.5 -5.27335 | opp_overlap 1684175, overlap 1684175 TAAATAGTAACATAA GTGTCTTTTGGTTTC CCAAC GAAACTGAAGGGCGC TTTTTATTTCCCGAA TERM 2331 1684269 - 1684254 - f 79 -7.6 -4.30034 | AAAATGTCAGCAAAA GCGTTA AGGA TAACGC TGATGAGAGTTGGGC Dhaf_1575 1684312 - 1685199 + | transcriptional regulator, LysR family TERM 2332 1685228 - 1685257 + F 93 -2.9 -5.93252 | gap 1, overlap 1685220 ATATGTGTAGTTAAA GGCTTTTACCTATC TTA GGGAGG-AAAAGTC TTTTTTATTTTTCAG TERM 2333 1685301 - 1685321 + F 80 -9.9 -3.73402 | AGATTCCTGACTTTA TCTATCTAT TAA ATAGATAGA TTTGATGACAACTAT Dhaf_1576 1685401 - 1685775 + | LrgA family protein Dhaf_1577 1685776 - 1686468 + | LrgB family protein TERM 2334 1686507 - 1686470 - f 84 -10.7 -3.58037 | opp_overlap 1686480 TATTAAGTTTGTAAA GGTCTGCAAATGTTGCA CCGG TGCACCATTTGAAAACC ATCGGCAAGTGAATC TERM 2335 1686856 - 1686827 - f 74 -5 -4.90266 | opp_overlap 1686827 1686829, overlap 1686829 TCCAGTAAGCAAAAA CACCTCTATCCA ATACTA CGGATAGGGGTA TTTTCAATGGTCCGG TERM 2336 1687090 - 1687074 - g 73 -2.1 -5.02476 | opp_overlap 1687074, overlap 1687076 AGATTGGTGAAAAAA TACCTGC GGA GCCGGAA TTGATGGATAGGTTT Dhaf_1578 1686974 - 1687666 + | GntR domain protein TERM 2337 1688115 - 1688105 - g 73 -3.2 -4.8543 | CAAGTCTGATAAAAA GAGA GTT TCCC AGACAGGTCGGAGTG TERM 2338 1688946 - 1688957 + G 73 -3.6 -4.87665 | CGTCGCTGTTCTCTG CTGG CTTA CCGG TTTTTGTGCATCAGG Dhaf_1579 1687702 - 1689021 + | major facilitator superfamily MFS_1 Dhaf_1580 1689018 - 1689434 + | protein of unknown function DUF523 TERM 2339 1689475 - 1689445 - f 82 -7.7 -4.56133 | opp_overlap 1689422 1689445 TCTGAATAATTAAAA GCCCCGATTTT TCAAGACAG AAAATCGGGAC TCTAGTGTTTCTGTT Dhaf_1581 1689575 - 1689952 + | iron (metal) dependent repressor, DtxR family Dhaf_1582 1691343 - 1689940 - | multi antimicrobial extrusion protein MatE TERM 2340 1690604 - 1690616 + g 75 -3.3 -5.14563 | overlap 1690605 GCCCCCAGCCGCAGC ACGGA AGT TCCGA TTTTTTGATCCCAGC TERM 2341 1691582 - 1691540 - H 100 -12.4 -3.54475 | opp_overlap 1691524 1691546 1691562 1691569 1691572 1691581, overlap 1691543 1691546 1691572 1691576 GTTGTCAGTAGAGAA TGATAACATTGCTACATAAC GAT GTTATATAACAATGTTATGA TAACGCTGTTATCTT TERM 2342 1691579 - 1691543 - H 100 -14.1 -2.9062 | opp_overlap 1691524 1691546 1691562 1691569 1691572, overlap 1691540 1691546 1691572 1691576 GTCAGTAGAGAATGA TAACATTGCTACATAAC GAT GTTATATAACAATGTTA TGATAACGCTGTTAT TERM 2343 1691576 - 1691546 - H 90 -11.4 -3.59424 | opp_overlap 1691524 1691546 1691562 1691569 1691572, overlap 1691543 1691540 1691572 AGTAGAGAATGATAA CATTGCTACATAAC GAT GTTATATAACAATG TTATGATAACGCTGT TERM 2344 1691581 - 1691595 + H 78 -7.2 -4.55295 | opp_overlap 1691540 1691576 1691572, overlap 1691562 1691572 1691569 ATATAACAATGTTAT GATAAC GCT GTTATC TTTCTTTGTCAACAG TERM 2345 1691630 - 1691616 - H 73 -2.8 -5.0916 | TTGTCAACAGAAAAA TGAGGA TCA TTCTCA CATCTCTAATTGGAC TERM 2346 1691765 - 1691744 - g 77 -8.7 -4.16842 | opp_overlap 1691744 CCTATGGTTAAGAAA TCGGCCGAT ACCC ATCGTCCGA TTACTATAGAATGTC TERM 2347 1692122 - 1692083 - g 90 -9.4 -4.56775 | gap 1, overlap 1692085 1692089 ATCCCTCTGGAAAAA GTCAAAGTCCATCCA-ACC TTG GGTATGGATGAACCCTGGC GTTACCGGAACAAAG TERM 2348 1692116 - 1692089 - g 81 -10 -3.99805 | gap 1, overlap 1692085 1692083 CTGGAAAAAGTCAAA GTCCATCCA-ACC TTG GGTATGGATGAAC CCTGGCGTTACCGGA TERM 2349 1692340 - 1692328 - g 73 -7.7 -4.07885 | GACCTTCCGGGAAAA TTCCC AGG GGGAA GGGATGTTGATTCTG Dhaf_1583 1691702 - 1693042 + | RNA methyltransferase, TrmA family TERM 2350 1693142 - 1693168 + F 100 -11 -5.1287 | ACAACAAAAGGAGCG GGCATGTTTTCA CAA TGAAGATATGCC TTTTTTACGTATCAC TERM 2351 1693825 - 1693808 - f 81 -4.2 -5.27779 | GGTAATACTAAAAAA TGGTTT TTCTGT AAACCA GATACTCGCTTGCCT TERM 2352 1694564 - 1694577 + G 70 -2.3 -4.93365 | overlap 1694565 ATACCAAGATTGTTC TGCTG TCGA CGGCG TTTTTAATTATCGGC Dhaf_1584 1693861 - 1695201 + | potassium uptake protein, TrkH family TERM 2353 1695771 - 1695755 - g 90 -5.8 -5.38054 | CGCTATAAAGAAAAA CGGGAA AATAA TCCCCG TTACCAGCGCCGAGC Dhaf_1585 1695213 - 1695863 + | TrkA-N domain protein TERM 2354 1696568 - 1696555 - g 73 -4.5 -4.73388 | AACTGGTAGTAAAAA CCGTG GCGA CACAG CTTGGGGCCGCGTTG TERM 2355 1697187 - 1697177 - g 77 -4 -5.11033 | opp_overlap 1697149 TACAACCCCAAAAAA CAAT ATT ATTG ATGGAAAACGCGGAA TERM 2356 1697212 - 1697230 + G 70 -9.6 -3.21924 | overlap 1697210 GCGGAATGGGGCTGG GTCTTGCA ATT TGCAAGGC TATTGTAGAAGCTCA TERM 2357 1697275 - 1697290 + G 78 -6 -4.74285 | overlap 1697250 1697251 GGGCGGAAAATCAGC CGGCCG GAGG CGCCCG TTTTGTGTTCTCCCT Dhaf_1586 1695903 - 1697324 + | histidine kinase Dhaf_1587 1697328 - 1698023 + | two component transcriptional regulator, winged helix family TERM 2358 1698650 - 1698699 + F 90 -11.2 -4.00486 | gap 2, overlap 1698653 GTGTAACTTAAGTTT TGAGACCAAATATATGTTATCAGG TTGA CCTGA-A-CATATGTTTGGTCTTA TTATTATATTATGAC TERM 2359 1698653 - 1698696 + F 93 -10.7 -4.11048 | gap 2, overlap 1698650 TAACTTAAGTTTTGA GACCAAATATATGTTATCAGG TTGA CCTGA-A-CATATGTTTGGTC TTATTATTATATTAT TERM 2360 1699120 - 1699109 - g 83 -4.4 -5.42198 | opp_overlap 1699109 CCGCAAAAAAGAAAA TTGC TCCG GCAA ATGTTAGATTTTCCC Dhaf_1589 1698865 - 1699494 + | Methyltransferase type 11 Dhaf_1590 1699679 - 1700104 + | 3-demethylubiquinone-9 3-methyltransferase Dhaf_1591 1700108 - 1700485 + | hypothetical protein Dhaf_1592 1700496 - 1700669 + | hypothetical protein Dhaf_1593 1701087 - 1701557 + | 3-demethylubiquinone-9 3-methyltransferase Dhaf_1594 1701621 - 1702436 + | peptidase M55 D-aminopeptidase TERM 2361 1702785 - 1702802 + G 74 -9.1 -3.72576 | opp_overlap 1702785 1702784 TCCGATCTTGCAAAG CCTTGCC ATGG GGCAGGG TTTGCTAAAAGGCAA TERM 2362 1703810 - 1703779 - g 76 -11.6 -2.78725 | gap 1, overlap 1703768 1703776 ACATCTCAGCAAGCA GCTGCGGCAAGGCCT CAA AAGCC-CGCCACAGC CAAGACGGCAGCCTA Dhaf_1595 1702591 - 1703877 + | DEAD/DEAH box helicase domain protein TERM 2363 1703955 - 1703935 - T 100 -8.3 -5.1675 | TCACGCACGAAAAAA GCACCGA AAACTAA TCGGTGC CTGTCACATCTATGG TERM 2364 1704015 - 1704053 + T 100 -13.2 -4.84017 | opp_overlap 1704018 1704022 ATACTCTTCTTGTAA GCAGAAACCCGGTGCA AAGTTGA TGCGCTGGGCTTCTGC TTTTTGTAACACATT TERM 2365 1704151 - 1704171 + T 75 -3.1 -5.14894 | opp_overlap 1704145 1704152, overlap 1704152 CGCTGAAAGCAGAAA TCCTGGAAG CTG CAGCCAGGG TTTTTCTGCTTTTTT Dhaf_1596 1705071 - 1704226 - | protein of unknown function DUF303 acetylesterase putative TERM 2366 1705314 - 1705276 - H 75 -6 -4.64766 | opp_overlap 1705265 1705276 TCCAGAGTTGAAAAA TACGACTCTTATCACC GGGAAGT GGAGATGAGGGTCGTA TTTTTTATTATGTAC TERM 2367 1705276 - 1705314 + H 100 -11.1 -5.60689 | opp_overlap 1705276, overlap 1705265 TCCAGAGTTGAAAAA TACGACTCTTATCACCG GGAAG TGGAGATGAGGGTCGTA TTTTTTATTATGTAC Dhaf_1597 1705432 - 1707834 + | molybdopterin oxidoreductase Dhaf_1598 1707855 - 1708418 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1599 1708430 - 1709242 + | DMSO reductase anchor subunit-like protein Dhaf_1600 1709442 - 1710116 + | cyclic nucleotide-binding protein TERM 2368 1710385 - 1710396 + G 76 -2.2 -5.28481 | gap 1 CTTTGTCATGCTCCT G-GGC AGC GCCTC TTTTTTGCTTGCCTC Dhaf_1601 1710143 - 1711327 + | major facilitator superfamily MFS_1 TERM 2369 1711658 - 1711636 - g 75 -3.4 -5.0133 | overlap 1711637 GACTGCCTGAAAAAA GTGCGGAT CAGTTAT ATCCGCAG GGCCGCTGTCGCGGT Dhaf_1602 1711444 - 1712052 + | hypothetical protein TERM 2370 1712070 - 1712106 + F 81 -9.6 -3.80733 | gap 1, opp_overlap 1712069 1712068, overlap 1712073 ATCAATCACTAAATC G-GAGGCACTCTACG TTAAATTC CGTAGAGTGCCTTGC TTATTATGCCGTCAA TERM 2371 1712073 - 1712102 + F 100 -13.7 -3.58208 | opp_overlap 1712069 1712068, overlap 1712070 AATCACTAAATCGGA GGCACTCTACG TTAAATTC CGTAGAGTGCC TTGCTTATTATGCCG Dhaf_1603 1712461 - 1713096 + | cobalamin B12-binding domain protein Dhaf_1604 1713131 - 1714375 + | hypothetical protein TERM 2372 1714417 - 1714441 + F 87 -8.5 -4.44046 | opp_overlap 1714416 1714419, overlap 1714422 AACTGTCACAAACAG TATGGGGGGCC TTT GGCCCCTTATC TTTATTTCCCGTGCG TERM 2373 1714422 - 1714436 + F 100 -12.8 -4.02911 | opp_overlap 1714419 1714416, overlap 1714417 TCACAAACAGTATGG GGGGCC TTT GGCCCC TTATCTTTATTTCCC TERM 2374 1714664 - 1714674 + G 71 -6.8 -4.24786 | GAGGAGCTTAGCCAG GGCT TGG AGCC TTTATCTATTCTGAA TERM 2375 1715150 - 1715128 - g 81 -7.6 -4.63542 | GACAATTGTCAAAAA CGGCGTCGAT TTT ATCGGAGCCG ATGCCTATACGGTCG Dhaf_1605 1714574 - 1715212 + | cobalamin B12-binding domain protein TERM 2376 1715418 - 1715397 - g 73 -2.2 -5.08601 | overlap 1715398 TGACGGTAAGAAAAA GCCTGTCC TTATTG GAACAGGA AGGCTATACTTATTC Dhaf_1606 1715255 - 1715980 + | transcriptional regulator, GntR family TERM 2377 1716005 - 1716060 + T 80 -6.5 -4.84359 | gap 2, opp_overlap 1716005 CAAAATAAAAAATAG GAAAAGACATTAGCGTGAGTTGATACC GGGA GGTA--AAGATGCGCTAATGTCTTTTC TTTTTATAAAGCTGA Dhaf_1607 1716500 - 1716159 - | transcriptional regulator, HxlR family TERM 2378 1716332 - 1716361 + g 75 -7.9 -4.29049 | gap 1, overlap 1716327 CATCTGCCTCCAGCT GCC-GAAGCTGTTG TGT CAGCATCTTCTGGC TTATTTTGCTGATTC Dhaf_1608 1716697 - 1717011 + | Cupin 2 conserved barrel domain protein TERM 2379 1717136 - 1717105 - T 82 -3 -5.52384 | opp_overlap 1717107, overlap 1717107 1717135 CTTTTATGAAAAAAA CTTTGGGTTCAAAA AGTA TTTTGAACACGATG TTCCCGGGGTACCGA TERM 2380 1717426 - 1717463 + T 100 -14.2 -4.65933 | opp_overlap 1717420 1717429, overlap 1717427 1717429 TAGAAAAATGAGTGT AAAGGCACCCTACGCT GAATGA AGCGTAGGGTGCCTGA TTTGTTTTCGGCCTA TERM 2381 1717427 - 1717462 + T 100 -17.7 -3.38836 | opp_overlap 1717420 1717429, overlap 1717426 1717429 AGAAAAATGAGTGTA AAGGCACCCTACGCT GAATGA AGCGTAGGGTGCCTG ATTTGTTTTCGGCCT TERM 2382 1717460 - 1717429 - T 100 -20.3 -3.67026 | opp_overlap 1717429 1717427 1717426, overlap 1717420 AAAAATGAGTGTAAA GGCACCCTACGCT GAATGA AGCGTAGGGTGCC TGATTTGTTTTCGGC TERM 2383 1717429 - 1717460 + T 100 -20.3 -3.25598 | opp_overlap 1717420 1717429, overlap 1717427 1717426 AAAAATGAGTGTAAA GGCACCCTACGCT GAATGA AGCGTAGGGTGCC TGATTTGTTTTCGGC Dhaf_1610 1719194 - 1717476 - | methyl-accepting chemotaxis sensory transducer TERM 2384 1718224 - 1718264 + g 71 -3.9 -4.74103 | overlap 1718227 ATCGCTGCAGATATC TGTTCAATGGCCATGGACG TAT CATCAATGGCCATGGATTG TTTTTCCGTTCCGGC TERM 2385 1718227 - 1718261 + g 85 -10 -4.47888 | overlap 1718224 GCTGCAGATATCTGT TCAATGGCCATGGACG TAT CATCAATGGCCATGGA TTGTTTTTCCGTTCC TERM 2386 1718492 - 1718508 + g 74 -10.9 -2.75957 | opp_overlap 1718494, overlap 1718494 CCGCTTCAACGGTAA GATTGCC CCG GGCAATC TCATTGACATTGGTC Dhaf_1611 1719698 - 1719273 - | CheW protein Dhaf_1612 1720644 - 1719727 - | putative PAS/PAC sensor protein TERM 2387 1720841 - 1720806 - H 74 -6.9 -4.25283 | gap 1, overlap 1720811 ATGGTCTTAGTAAAA GCGAAGCCATGAGTCA TTAAT TG-CTCATGGCTATGC AAAACCAAAGGGTGA Dhaf_1613 1720920 - 1722704 + | histidine kinase Dhaf_1614 1722701 - 1723831 + | response regulator receiver and SARP domain protein Dhaf_1615 1723915 - 1724790 + | protein of unknown function DUF6 transmembrane Dhaf_1616 1725512 - 1724811 - | putative transcriptional regulator, ArsR family TERM 2388 1726791 - 1726733 - R 100 -24.5 -3.83502 | gap 2, opp_overlap 1726737, overlap 1726737 TATCTCCACAGTAAA GGAACGACGGTATGAGACCTGAACATTTC ATC AAAATGTTCAGGTCTCATACCGTCGTT-- TTATGCTCAAACCGA TERM 2389 1726737 - 1726789 + r 100 -34 -4.46212 | opp_overlap 1726733 1726737 TCCACAGTAAAGGAA CGACGGTATGAGACCTGAACATTT CATCA AAATGTTCAGGTCTCATACCGTCG TTTTATGCTCAAACC TERM 2390 1726789 - 1726737 - R 100 -34.7 -3.59402 | opp_overlap 1726737, overlap 1726733 TCCACAGTAAAGGAA CGACGGTATGAGACCTGAACATTTC ATC AAAATGTTCAGGTCTCATACCGTCG TTTTATGCTCAAACC Dhaf_1618 1728364 - 1726826 - | hypothetical protein TERM 2391 1728435 - 1728403 - H 100 -9.9 -5.61824 | opp_overlap 1728402, overlap 1728406 TAAAATTTAAAAAAA TAATGGCTCCGCC AATAGAA AGCGGAGCCATAA CTGATTTCATACACA TERM 2392 1728432 - 1728406 - H 100 -11.6 -4.83715 | opp_overlap 1728402, overlap 1728403 AATTTAAAAAAATAA TGGCTCCGCC AATAGAA AGCGGAGCCA TAACTGATTTCATAC Dhaf_1619 1729054 - 1729629 + | Uracil-DNA glycosylase superfamily Dhaf_1620 1730569 - 1729640 - | hypothetical protein TERM 2393 1730131 - 1730119 - G 71 -4.7 -4.58685 | overlap 1730120 AAATGTCGCTAAAAA GGCGC GGT GAGCC TGCGCAGATGATCAT Dhaf_1621 1731692 - 1730586 - | transcriptional regulator, XRE family TERM 2394 1731282 - 1731305 + g 81 -12.4 -3.01791 | overlap 1731284 CGTCACGGTTTCGTT CAGGAGGGCC TCTT GGCGCTCCTG TGTTCCCGCCAGCAT TERM 2395 1731781 - 1731745 - R 100 -14.7 -3.54489 | opp_overlap 1731741 1731741, overlap 1731741 1731775 TCAACCTTAAAGCAA CTTGTAGTTGACTTTTC AGG GAAAAATCAACTACAGG GAAACAGTATACTAT TERM 2396 1731846 - 1731788 - R 100 -18.2 -3.44888 | opp_overlap 1731793 1731804, overlap 1731775 1731789 1731791 1731793 1731804 AACTACAGGGAAACA GTATACTATTTTAAAACACAGTTC-TCC ATGTA GGATGAACTGTGTTTTAAAATAGTATA- CTGGGATTCAAAAAT TERM 2397 1731846 - 1731789 - R 100 -24.2 -2.6621 | gap 1, opp_overlap 1731793 1731804, overlap 1731775 1731788 1731791 1731793 1731804 ACTACAGGGAAACAG TATACTATTTTAAAACACAGTTC-TCC ATGTA GGATGAACTGTGTTTTAAAATAGTATA CTGGGATTCAAAAAT TERM 2398 1731844 - 1731791 - R 100 -22.4 -2.86838 | gap 1, opp_overlap 1731793 1731804, overlap 1731775 1731788 1731789 1731793 1731804 TACAGGGAAACAGTA TACTATTTTAAAACACAGTTC-TCC ATGTA GGATGAACTGTGTTTTAAAATAGTA TACTGGGATTCAAAA TERM 2399 1731793 - 1731842 + r 100 -20.6 -2.80994 | gap 1, opp_overlap 1731775 1731791 1731788 1731789 1731793 1731804, overlap 1731804 CAGGGAAACAGTATA CTATTTTAAAACACAGTTC-TCC ATGTA GGATGAACTGTGTTTTAAAATAG TATACTGGGATTCAA TERM 2400 1731842 - 1731793 - R 100 -20.6 -2.97735 | gap 1, opp_overlap 1731793 1731804, overlap 1731775 1731791 1731788 1731789 1731804 CAGGGAAACAGTATA CTATTTTAAAACACAGTTC-TCC ATGTA GGATGAACTGTGTTTTAAAATAG TATACTGGGATTCAA TERM 2401 1731804 - 1731831 + r 85 -9.3 -4.16279 | gap 1, opp_overlap 1731775 1731793 1731791 1731788 1731789 1731804, overlap 1731793 TATACTATTTTAAAA CACAGTTC-TCC ATGTA GGATGAACTGTG TTTTAAAATAGTATA TERM 2402 1731831 - 1731804 - R 85 -9.3 -4.16279 | gap 1, opp_overlap 1731804 1731793, overlap 1731775 1731793 1731791 1731788 1731789 TATACTATTTTAAAA CACAGTTC-TCC ATGTA GGATGAACTGTG TTTTAAAATAGTATA Dhaf_1622 1734582 - 1731907 - | pyruvate phosphate dikinase PEP/pyruvate-binding TERM 2403 1733157 - 1733173 + g 74 -2.9 -5.02439 | GTTCCGGCGTAGTCA GACCAGT GAC ATCGGTC TTTTTATACTTGTCT Dhaf_1623 1735211 - 1734594 - | transcriptional regulator, TetR family TERM 2404 1735402 - 1735367 - H 86 -12 -3.04144 | opp_overlap 1735376 1735379, overlap 1735369 1735376 CTCCCATGGGGAAGA CAGTTCAAATGTTGCA GCGC TGCATCATTTGAGCTG CATGCAGTAAAGATA Dhaf_1624 1735751 - 1737325 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 2405 1737435 - 1737475 + T 70 -10 -2.52082 | opp_overlap 1737441, overlap 1737441 GGGAACCTATCCTGA TCAAAACCAGATCCTTAT AAGGA ATAAAGATCTGGTTTTCA ATATTAATGATTGGT TERM 2406 1737441 - 1737469 + T 86 -9 -4.29325 | opp_overlap 1737441, overlap 1737435 CTATCCTGATCAAAA CCAGATCCTTAT AAGGA ATAAAGATCTGG TTTTCAATATTAATG TERM 2407 1737469 - 1737441 - T 100 -11.2 -4.26076 | opp_overlap 1737441 1737435 CTATCCTGATCAAAA CCAGATCCTTAT AAGGA ATAAAGATCTGG TTTTCAATATTAATG Dhaf_1626 1738736 - 1737495 - | transcriptional regulator, CdaR TERM 2408 1738336 - 1738358 + g 80 -8.5 -4.37711 | GCCTCGAAGATAGTT TCCTTGTCT TCTGC AGACAGGGA TTTTGGCTTTAGTGA Dhaf_1627 1739328 - 1738723 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1628 1741408 - 1739333 - | molybdopterin oxidoreductase TERM 2409 1742277 - 1742287 + G 71 -4.6 -4.49389 | GTTGAAGAAGTAACC GGGG ATG CTCC TTTTGGTTATGCCAT Dhaf_1629 1741716 - 1744085 + | molybdopterin oxidoreductase Dhaf_1630 1744099 - 1744719 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1631 1744761 - 1745942 + | Polysulphide reductase NrfD Dhaf_1632 1745984 - 1746673 + | cytoplasmic chaperone TorD family protein TERM 2410 1746726 - 1746687 - f 100 -15 -3.35992 | opp_overlap 1746678 1746698, overlap 1746688 AGGCATCTGAATTAA TGGGGCATAGAGCGGAGC AATG GTTTCGCTCTATGCCCCG ATCTCAAGTCATTCA TERM 2411 1746725 - 1746688 - f 100 -18.5 -2.61274 | opp_overlap 1746678 1746698, overlap 1746687 GGCATCTGAATTAAT GGGGCATAGAGCGGAGC AATG GTTTCGCTCTATGCCCC GATCTCAAGTCATTC Dhaf_1633 1746874 - 1749078 + | molybdopterin oxidoreductase Dhaf_1634 1749103 - 1749639 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1635 1749678 - 1750373 + | cytoplasmic chaperone TorD family protein Dhaf_1636 1750400 - 1751278 + | Polysulphide reductase NrfD TERM 2412 1751446 - 1751459 + G 73 -2.3 -5.0666 | overlap 1751447 TTTCAGGTCCTTGCC TGGCC GTGG GGCTG TTTCTTTTTTCCCTG Dhaf_1637 1751295 - 1752152 + | Polysulphide reductase NrfD TERM 2413 1752455 - 1752471 + G 71 -8.7 -3.61715 | opp_overlap 1752413 1752454 1752458, overlap 1752458 CATCGCCACAGGAAT TGACCCC CAT GGGGTTA TTGTTGGCACAGCTA TERM 2414 1752458 - 1752468 + G 73 -8.2 -3.9461 | opp_overlap 1752413 1752458 1752454, overlap 1752455 CGCCACAGGAATTGA CCCC CAT GGGG TTATTGTTGGCACAG TERM 2415 1752588 - 1752568 - g 71 -2.6 -4.91712 | overlap 1752572 TCGAAGCTAGAAAAA TAACCGAT CCCCT ATCGATCA AACAGGACATCAATG Dhaf_1638 1752276 - 1753397 + | FMN-binding domain protein TERM 2416 1753469 - 1753484 + G 81 -6.2 -4.86033 | overlap 1753458 TGGTTCAACTGTTTT GTTGAT TAGT ATCAAC TTTTTGTCCCGCTTT Dhaf_1639 1753407 - 1753505 + | hypothetical protein TERM 2417 1753549 - 1753535 - f 82 -5 -5.31275 | GGTGATGAGAAAAAA GACCTT AGT AAGATC GGTTCGGATACATTA Dhaf_1640 1753596 - 1753799 + | 4-oxalocrotonate tautomerase family enzyme TERM 2418 1753843 - 1753813 - f 89 -11.3 -3.53745 | opp_overlap 1753813, overlap 1753809 GACATTTGAAAGGAA TCCGGGTTTTATT GAATA AATAGAACCCGGA TTATTGTGAATCAGC TERM 2419 1753813 - 1753843 + F 100 -13.5 -3.8211 | opp_overlap 1753809 1753813 GACATTTGAAAGGAA TCCGGGTTTTATT GAATA AATAGAACCCGGA TTATTGTGAATCAGC TERM 2420 1754136 - 1754113 - g 73 -3.2 -4.87803 | TATTGCTAAACAAAA TCAATCAATC ACCA GAATAATTGA TGCGGCAAAAGGGTT Dhaf_1641 1753859 - 1754680 + | Xylose isomerase domain protein TIM barrel TERM 2421 1754875 - 1754855 - f 75 -5.6 -4.63184 | opp_overlap 1754857 AATTTATCGCAAAAA TATTCTTT GTTTT AAAGAATA TCTGACCATTAAGGT Dhaf_1642 1754928 - 1755380 + | transcriptional regulator, MarR family TERM 2422 1755506 - 1755526 + F 90 -4 -5.64873 | ATTGTCTATCCAGGA GAGCTTAC AATCA GTAGGTTC TTTTTTATTATTGCG Dhaf_1643 1755763 - 1757046 + | hypothetical protein TERM 2423 1757251 - 1757236 - g 85 -6.2 -5.0538 | opp_overlap 1757236 TGGGATGTGAAAAAA TCTATG TCAA CATAGA TTATGTAAAACCAGG Dhaf_1644 1757124 - 1757588 + | Cupin 2 conserved barrel domain protein Dhaf_1645 1758217 - 1757702 - | cotJC protein TERM 2424 1758388 - 1758333 - R 100 -13.6 -5.18357 | gap 2, opp_overlap 1758336, overlap 1758336 GAACGGAGCAAAAAA TAAGGGACCGCAGCG-TCT-TCAGAT TGTCTT ATCTGATAGAGCGCTGGGGTCCCTTT TGGATTATTTTAGTG TERM 2425 1758336 - 1758385 + r 100 -15.3 -4.41817 | gap 2, opp_overlap 1758336 1758333 CGGAGCAAAAAATAA GGGACCGCAGCG-TCT-TCAGAT TGTCTT ATCTGATAGAGCGCTGGGGTCCC TTTTGGATTATTTTA TERM 2426 1758385 - 1758336 - R 100 -15.3 -4.67552 | gap 2, opp_overlap 1758336, overlap 1758333 CGGAGCAAAAAATAA GGGACCGCAGCG-TCT-TCAGAT TGTCTT ATCTGATAGAGCGCTGGGGTCCC TTTTGGATTATTTTA Dhaf_1646 1760452 - 1758398 - | Catalase TERM 2427 1758539 - 1758526 - G 70 -9.5 -3.14878 | overlap 1758524 GTCCGGAAGGCAACA GGCCC AGCA GGGCC GACGCCTCACCGCTT TERM 2428 1758985 - 1759013 + g 71 -8.9 -3.55181 | GATCCACGTTGCCCA GCATATCCACAAG CTT TTGGTGGGTATGC TTATGCTTGCATTTG TERM 2429 1760136 - 1760124 - G 71 -4.7 -4.59853 | GCAACGGTGGAAAAA CGGAC GAA GACCG GCGTAATCAGATTGG TERM 2430 1760531 - 1760548 + r 100 -12.7 -3.56821 | opp_overlap 1760531 GAACAGTGCTGAAAA GGCAGCG AATC CGCTGCC TTTAAACACTATCCT TERM 2431 1760548 - 1760531 - R 100 -12.7 -4.11371 | opp_overlap 1760531 GAACAGTGCTGAAAA GGCAGCG AATC CGCTGCC TTTAAACACTATCCT Dhaf_1647 1761834 - 1760563 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 2432 1761312 - 1761296 - G 77 -6.5 -4.48987 | opp_overlap 1761308, overlap 1761298 TTTTGATAAGCAAAA CGGGCAA TCA TTGCCAG ATCCCGGGCTGTAGT TERM 2433 1762074 - 1762057 - H 85 -4.1 -5.47399 | opp_overlap 1762059 GCAATCTGAAAAAAA TACGAAC CATA GTACGTA ATTAGAGAATGAGAT TERM 2434 1762400 - 1762390 - g 73 -5.4 -4.65458 | GAGAGAAACAAGAAA GGAA TAT TTCC GGAGGGCAATGCAGT Dhaf_1648 1762108 - 1762650 + | hypothetical protein Dhaf_1649 1762716 - 1763318 + | Methyltransferase type 12 Dhaf_1650 1763375 - 1764028 + | DNA-3-methyladenine glycosylase Dhaf_1651 1764154 - 1764576 + | transcriptional regulator, MarR family TERM 2435 1765956 - 1765944 - g 71 -4.1 -4.8048 | TTTCGAGATGAAAAA GCTTC CTA AAAGC GTGCCGATTCCCCAG Dhaf_1652 1764619 - 1765983 + | MATE efflux family protein TERM 2436 1765984 - 1766023 + F 73 -8.7 -3.41378 | opp_overlap 1765991, overlap 1765991 CAGGAAAGCGTCTAA GCGAAAATCTCCACTAC ATTAAA GCAGTGGAGATTTTTTC ATTTTATTAAGTCTC TERM 2437 1765991 - 1766016 + F 100 -7.6 -5.52347 | opp_overlap 1765991, overlap 1765984 GCGTCTAAGCGAAAA TCTCCACTAC ATTAAA GCAGTGGAGA TTTTTTCATTTTATT TERM 2438 1766016 - 1765991 - f 93 -9.8 -4.27316 | opp_overlap 1765984 1765991 GCGTCTAAGCGAAAA TCTCCACTAC ATTAAA GCAGTGGAGA TTTTTTCATTTTATT TERM 2439 1766343 - 1766355 + G 90 -7.7 -5.00884 | GCGGTTTATTCTCGT TTGGC ATA GCCAA TTTTTTGACAGCCAT TERM 2440 1766711 - 1766727 + G 100 -10.9 -4.59853 | CTGAAAATTATTTCT GCAGTGA GTG TCACTGC TTTTTGGGCAATTGC TERM 2441 1766778 - 1766793 + G 75 -3.3 -5.08601 | TTCTCGGCACAGGAT TGGTT TTAGAT AACCA TTTTTCTTCAAGTGA Dhaf_1653 1766054 - 1767232 + | major facilitator superfamily MFS_1 TERM 2442 1767279 - 1767249 - T 70 -2.6 -5.07971 | opp_overlap 1767249 GAAAATAAGCAAAAA CAAGGCCGAA GAAGTGCAGAT TTTGGCCTTG TTTTTTATCTGATTC TERM 2443 1767249 - 1767279 + T 87 -5.5 -5.42131 | opp_overlap 1767249 GAAAATAAGCAAAAA CAAGGCCGAAG AAGTGCAGA TTTTGGCCTTG TTTTTTATCTGATTC Dhaf_1654 1767841 - 1767332 - | ABC transporter, permease component TERM 2444 1767850 - 1767836 - G 83 -4.2 -5.41143 | overlap 1767838 CATGCCCGAAAAAAA CAGCAA GCG TTGCGG ATACCTTGACTGCGC Dhaf_1655 1767951 - 1768190 + | transcriptional regulator, AbrB family Dhaf_1656 1768190 - 1769260 + | hypothetical protein TERM 2445 1769272 - 1769312 + T 80 -6.4 -4.90906 | gap 2, opp_overlap 1769277, overlap 1769273 1769277 ATGAGGAATCGTTGA CAA--AAGGCATCGGAACCT AAA AAGTTCTGATGCCTTAGTTG TTTTTCCTATTATAA TERM 2446 1769273 - 1769309 + T 78 -7.3 -4.53398 | opp_overlap 1769277, overlap 1769272 1769277 TGAGGAATCGTTGAC AAAAGGCATCGGAACCT AAA AAGTTCTGATGCCTTAG TTGTTTTTCCTATTA TERM 2447 1769277 - 1769305 + T 100 -12.5 -3.75772 | opp_overlap 1769277, overlap 1769273 1769272 GAATCGTTGACAAAA GGCATCGGAACCT AAA AAGTTCTGATGCC TTAGTTGTTTTTCCT TERM 2448 1769305 - 1769277 - T 100 -12.5 -4.386 | opp_overlap 1769277 1769273 1769272 GAATCGTTGACAAAA GGCATCGGAACCT AAA AAGTTCTGATGCC TTAGTTGTTTTTCCT Dhaf_1657 1770165 - 1769347 - | transcriptional regulator, MerR family TERM 2449 1770712 - 1770699 - g 73 -8.1 -4.04576 | AGCTACACAAGCAAA GCGGT CCTG ACCGC CGCCGCGAACTGCGT Dhaf_1658 1770375 - 1772522 + | FMN-binding domain protein TERM 2450 1773427 - 1773415 - g 74 -9.1 -3.73534 | CAACCTTACCAACAA CGCCA CCC TGGCG ACGTTAGACAATGCG Dhaf_1659 1772573 - 1774819 + | NADH:flavin oxidoreductase/NADH oxidase TERM 2451 1774861 - 1774906 + T 100 -22.8 -2.90194 | opp_overlap 1774852 1774865, overlap 1774865 AAGTAATTTAGAAAC TAAAGACTGCCGCCAAAGCC CATCAA GGCTTAGGCGGCAGTCTTTG TGTCCTTAAAGAAAT TERM 2452 1774865 - 1774902 + T 100 -21.4 -4.1347 | opp_overlap 1774865, overlap 1774861 AATTTAGAAACTAAA GACTGCCGCCAAAGCC CATCAA GGCTTAGGCGGCAGTC TTTGTGTCCTTAAAG TERM 2453 1774902 - 1774865 - T 100 -22.1 -4.15669 | opp_overlap 1774865 1774861 AATTTAGAAACTAAA GACTGCCGCCAAAGCCC ATCA AGGCTTAGGCGGCAGTC TTTGTGTCCTTAAAG Dhaf_1660 1775932 - 1774970 - | protein of unknown function DUF6 transmembrane TERM 2454 1776024 - 1775995 - H 100 -16.6 -5.42164 | CAGAAAGAACAAAAA TGCCTCGAGGAA ATGGTG TTCCTCGAGGCA TAAACATACAAACAT TERM 2455 1776062 - 1776051 - H 72 -7.2 -4.01025 | ACATAACAAACATAA GGCC ACTT GGCC TAAGCTGGTTTGTAC Dhaf_1661 1776505 - 1777113 + | peptidase M15D vanX D-ala-D-ala dipeptidase Dhaf_1662 1777269 - 1778630 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase TERM 2456 1778824 - 1778847 + G 70 -2.4 -4.84529 | opp_overlap 1778815, overlap 1778825 GAACCACTATGCCAA AGCAAAGGCT CCAG AGTTTTTGCC TTTTTGCATTTATGA TERM 2457 1779100 - 1779112 + G 78 -7.7 -4.33907 | CGGTTTGTGTCATCT CAGCA ATT TGCTG TTTTGGCTCTTTCTG Dhaf_1663 1778711 - 1779541 + | VanW family protein Dhaf_1664 1779555 - 1780580 + | D-alanine/D-alanine ligase TERM 2458 1780623 - 1780653 + F 76 -9.7 -3.40299 | overlap 1780634 AAGAAAATTGCCAAA GGGACAGTTTGCC GATAG GGTGGGCTGTCCC TTATCGGTATGGTGA Dhaf_1665 1780778 - 1781476 + | two component transcriptional regulator, winged helix family TERM 2459 1781604 - 1781624 + G 71 -3.9 -4.7497 | CAAAAAAACTTCAGT GTGGGCGAT AGC ATAGTCCGC TTTTTAATGACTGCG TERM 2460 1781931 - 1781910 - g 87 -6.5 -5.098 | gap 1 GAAAAACAAAAGAAA GCCGCCCTGG AGG CC-GAGCAGC GCAAAAATGATTTAG Dhaf_1666 1781466 - 1782599 + | histidine kinase TERM 2461 1782641 - 1782680 + F 100 -10.9 -4.60797 | overlap 1782643 AAGCTGGAAGTCCTA TAGCTCCTTGTTCTGTG GTTAAG TACAGAATGAGGAGCTG TTTTATATGTCCGAG TERM 2462 1782643 - 1782678 + F 100 -11.3 -3.91674 | overlap 1782641 GCTGGAAGTCCTATA GCTCCTTGTTCTGTG GTTAAG TACAGAATGAGGAGC TGTTTTATATGTCCG TERM 2463 1782971 - 1782986 + G 85 -10.4 -4.20024 | overlap 1782971 1782983 CTGGTTTTTCCTGGG GCCCAG CCTG CTGGGC TTTGCTCTTTTTTAT TERM 2464 1782983 - 1782993 + G 93 -4.6 -5.68438 | overlap 1782971 1782971 GGGGCCCAGCCTGCT GGGC TTT GCTC TTTTTTATTTGCTCC TERM 2465 1783113 - 1783101 - g 83 -4.1 -5.40072 | opp_overlap 1783086, overlap 1783105 GCTTTGTTAAAAAAA CCAAG CTT CTTAG CAGCTCTGGCCAATA Dhaf_1667 1782915 - 1783787 + | binding-protein-dependent transport systems inner membrane component TERM 2466 1783827 - 1783846 + G 71 -6.4 -4.28651 | opp_overlap 1783826, overlap 1783828 TTGAAGGGTAACCAC CGGATCAG AAAT CTGATCCA TTTTGCAATTTTGCT TERM 2467 1783828 - 1783845 + G 70 -9.9 -3.16106 | opp_overlap 1783826, overlap 1783827 TGAAGGGTAACCACC GGATCAG AAAT CTGATCC ATTTTGCAATTTTGC TERM 2468 1784186 - 1784198 + G 100 -7.7 -6.06529 | ACTGAAGTTCAGGGG CAGGA ATT TCCTG TTTTTTTTGTATATC Dhaf_1668 1783812 - 1784696 + | binding-protein-dependent transport systems inner membrane component TERM 2469 1785212 - 1785196 - g 70 -2.3 -4.86385 | overlap 1785198 AGGCGCAAAAACAAA GAGATTA CGA TAATCTG AAGGTCCTGTTTGAT TERM 2470 1785280 - 1785260 - g 75 -7.6 -4.17089 | gap 1, overlap 1785251 1785261 1785272 GGTAAACCTGGAAAA TGCCGCCAG GAAC CTGGCGG-A CGCGCAAAGGCACTG TERM 2471 1785741 - 1785706 - g 83 -2.4 -5.64006 | overlap 1785710 ATTTAAGCAAAAAAA CCAAGCCTTACGATAC CCTC GTACCGAACAGCGCGG TTTATGACGACAGCA Dhaf_1669 1784790 - 1785956 + | RND family efflux transporter MFP subunit Dhaf_1670 1785953 - 1787383 + | hypothetical protein TERM 2472 1788412 - 1788424 + GF 75 -3.3 -5.08824 | opp_overlap 1788412 GGGTAGGTTTTAATA TGGCC AAG GCCCA TTTTTTCGATCAGGA Dhaf_1671 1787352 - 1788473 + | ABC transporter related TERM 2473 1789127 - 1789115 - g 71 -4.7 -4.52781 | GAACGACAAGCAAAA CGGGG AAA CCCAG GGGATGTATGCCTTG TERM 2474 1789818 - 1789786 - g 77 -8.4 -4.24342 | TTGTTCAGGAAGAAA CCGCGGCCTTCTTT ACAGG ACAGAAGACAGCGG AGGTGACTGCCCAAT Dhaf_1672 1788492 - 1789871 + | extracellular solute-binding protein family 1 TERM 2475 1789876 - 1789906 + F 100 -14.8 -3.53343 | opp_overlap 1789880 TAAATGAATGAACGC CAAAGAGCACCGAG CAG TTCGGTGCTCTTAG TTTAAAAGGCGAGTT TERM 2476 1789902 - 1789880 - f 100 -13.5 -3.69434 | opp_overlap 1789876 TGAATGAACGCCAAA GAGCACCGA GCAGT TCGGTGCTC TTAGTTTAAAAGGCG TERM 2477 1789960 - 1789974 + F 77 -6.4 -4.58085 | overlap 1789961 AGCAATTTTTCACTT TTGCCA AGG TGGCAG TTTATTTCTGGCTGT Dhaf_1673 1790101 - 1790802 + | two component transcriptional regulator, winged helix family TERM 2478 1791317 - 1791307 - g 76 -2.4 -5.26119 | TGCTTAAAAATAAAA CCGC GTT GCTG GATACTTTGATTGAA TERM 2479 1791711 - 1791699 - g 73 -5.5 -4.57073 | overlap 1791700 TACCGGGCGGAAAAA TCCCG CTC CAGGA GCTTCGGGGGAGCGG Dhaf_1674 1790799 - 1791857 + | histidine kinase TERM 2480 1792077 - 1792091 + G 76 -7.2 -4.43351 | overlap 1792075 CAGCTTCAGGACCGG CTTATC GTG GATAAG TTCTTTTTCAAGTAT Dhaf_1675 1791900 - 1792298 + | peptidase S24 and S26 domain protein Dhaf_1676 1792512 - 1792838 + | hypothetical protein Dhaf_1677 1793361 - 1792939 - | hypothetical protein TERM 2481 1793590 - 1793604 + H 70 -7.2 -3.86346 | opp_overlap 1793590 1793592 CCTGTTGGTAAACTA TATCGA TAT TCGATA TTTATGAAGGAATGA Dhaf_1678 1793624 - 1793944 + | transcriptional regulator, PadR-like family Dhaf_1679 1793944 - 1795332 + | hypothetical protein TERM 2482 1795474 - 1795429 - f 78 -10.6 -3.24 | opp_overlap 1795429, overlap 1795455 AAAGGAATTTAGTAA GGGATTTTTGAGATACGAGG GTAGAA CTTTGAATCTCAAAAATCCC TTTTTTTACACTATT TERM 2483 1795429 - 1795474 + F 100 -15 -5.46629 | opp_overlap 1795429 1795455 AAAGGAATTTAGTAA GGGATTTTTGAGATACGAGG GTAGAA CTTTGAATCTCAAAAATCCC TTTTTTTACACTATT Dhaf_1680 1795653 - 1795976 + | transcriptional regulator, PadR-like family Dhaf_1681 1795976 - 1796323 + | hypothetical protein Dhaf_1682 1796333 - 1796683 + | hypothetical protein Dhaf_1683 1796699 - 1797460 + | ABC transporter related TERM 2484 1797480 - 1797465 - g 80 -4 -5.19819 | overlap 1797470 AAACAAAATGAAAAA CAATAC AGTC GTACTG ACCGGGCGCTTAATG Dhaf_1684 1797457 - 1798212 + | ABC-2 type transporter TERM 2485 1798298 - 1798321 + F 78 -2.2 -5.54885 | overlap 1798300 TAAAGCTAAAAATCT TTCCGGCAGA TCTA TCGGCCGGTC TTTTTTATTGCTGTT TERM 2486 1798300 - 1798319 + F 88 -9.2 -4.39002 | overlap 1798298 AAGCTAAAAATCTTT CCGGCAGA TCTA TCGGCCGG TCTTTTTTATTGCTG Dhaf_1685 1798462 - 1799172 + | SNARE associated Golgi protein TERM 2487 1799235 - 1799185 - T 81 -4.1 -5.32565 | opp_overlap 1799185 TAAGTAATTAAAAAA CACAAAGGCATTGATAAACTC TGGAATAAG GCGTTCAGCGATACCTTTGTG TTTTTTATAGTCCGA TERM 2488 1799185 - 1799235 + T 76 -2.6 -5.31275 | opp_overlap 1799185 TAAGTAATTAAAAAA CACAAAGGCATTGATAAACTCT GGAATAA GGCGTTCAGCGATACCTTTGTG TTTTTTATAGTCCGA Dhaf_1686 1801115 - 1799253 - | drug resistance transporter, EmrB/QacA subfamily TERM 2489 1801231 - 1801268 + H 100 -19.2 -4.8048 | opp_overlap 1801228 1801225 TTTTCAGAATATCTG CCCCGTTGCCTACCGG TTTGCC CCGGAAGGCAATGGGG TTTTTAATGTAAGCG Dhaf_1687 1801348 - 1801545 + | hypothetical protein Dhaf_1688 1801569 - 1802069 + | GCN5-related N-acetyltransferase TERM 2490 1802118 - 1802136 + G 78 -5.2 -4.90917 | CGGGATACAAGGCAT GGTCGTGA TGT TAACGGCC TTTTTAGTTGGCTTT TERM 2491 1802237 - 1802263 + G 70 -2.3 -4.85129 | gap 1, overlap 1802230 1802238 1802239 ATTCGACAGGGGTTC TG-CTCCCTCTA TTGT TAGTGGGAGATA TTTTTGCTGTCTGGT TERM 2492 1802396 - 1802410 + G 77 -5 -4.87592 | AGGTGTTTGTCATCT TGATCG GAA CGATTA TTTTATTCTGTCTGG Dhaf_1689 1802071 - 1802829 + | protein of unknown function DUF81 TERM 2493 1802851 - 1802831 - f 76 -9.7 -3.25823 | opp_overlap 1802816 1802844 GGCTGTTGATATGAA CAGCGCTTT ATC ACAGCGCTG CAGTATGTGATCGAC Dhaf_1690 1802927 - 1803205 + | prevent-host-death family protein Dhaf_1691 1803202 - 1803513 + | plasmid stabilization system TERM 2494 1803635 - 1803604 - f 87 -8.6 -4.5442 | opp_overlap 1803605, overlap 1803605 TTGGGAATCAGAAAA TGCCGCCAAAGCTT CGTC AGGCTTAGGCGGCT TTTTTTGCATTTTCA TERM 2495 1803634 - 1803605 - f 89 -12.1 -3.3217 | opp_overlap 1803605, overlap 1803604 TGGGAATCAGAAAAT GCCGCCAAAGCTT CGTC AGGCTTAGGCGGC TTTTTTTGCATTTTC TERM 2496 1803605 - 1803634 + F 100 -14.3 -5.61824 | opp_overlap 1803605 1803604 TGGGAATCAGAAAAT GCCGCCAAAGCTT CGTC AGGCTTAGGCGGC TTTTTTTGCATTTTC TERM 2497 1803689 - 1803737 + F 100 -19.3 -3.67102 | opp_overlap 1803686 1803697 1803723, overlap 1803689 CATGCGGAAGTATCT TGACCCAAGTGGTCATTTT GCAGTATTATA AAAATGACCACTTGGGTCA TTGTGATTTATCTCA TERM 2498 1803737 - 1803723 - g 81 -5.7 -4.93296 | opp_overlap 1803689, overlap 1803697 1803686 GCAGTATTATAAAAA TGACC ACTTG GGTCA TTGTGATTTATCTCA Dhaf_1692 1803722 - 1804396 + | transcriptional regulator, TetR family Dhaf_1693 1804414 - 1805112 + | ABC transporter related TERM 2499 1805830 - 1805814 - g 81 -7.9 -4.49316 | overlap 1805816 ATTATGAACAATAAA CGGGCCA GGA TGGCCTG GGCGTCGATCACCGG TERM 2500 1806276 - 1806259 - g 81 -3.4 -5.4833 | overlap 1806269 GGAGTGAACAAAAAA CCAAAG TGAACG CTCTGG AGCGGGCCTTTAAGC Dhaf_1694 1805112 - 1807361 + | protein of unknown function DUF214 TERM 2501 1807373 - 1807396 + T 100 -16 -4.56597 | opp_overlap 1807373 ATAGTGGAGGAAAAA GAGCGCCGGG GAAG TCCGGCGCTC TTTTTAAAGGGGAAC TERM 2502 1807396 - 1807373 - T 100 -15.3 -4.74132 | opp_overlap 1807373 ATAGTGGAGGAAAAA GAGCGCCGG GGAAGT CCGGCGCTC TTTTTAAAGGGGAAC Dhaf_1695 1807866 - 1807411 - | heat shock protein Hsp20 TERM 2503 1807541 - 1807554 + g 80 -3.8 -5.20222 | opp_overlap 1807534 ATGGCAAATGACCTG GCCA TGGAGC TGGC TTTTCTTTCTTTCCT TERM 2504 1808266 - 1808249 - R 70 -7.7 -3.6215 | opp_overlap 1808249 GGAAGGGAGTTCAAA TGGTGCA TTGA CGCACCA TTTGAGGGCATGCGA TERM 2505 1808417 - 1808455 + r 100 -17.6 -4.65168 | opp_overlap 1808417 GAGGATTACAATAAA GAGCCTCTCATCGTAG TCTAATT CTGCGATGAGGGGCTC TTTTTAAAATCTGCT TERM 2506 1808455 - 1808417 - R 100 -13.2 -4.36554 | opp_overlap 1808417 GAGGATTACAATAAA GAGCCTCTCATCGTAG TCTAATT CTGCGATGAGGGGCTC TTTTTAAAATCTGCT Dhaf_1696 1809621 - 1808506 - | transcriptional regulator, XRE family TERM 2507 1808793 - 1808767 - G 73 -3.6 -4.86731 | GCTGCGCAAAGAAAA GCAATGCAGGTT ATT ATCGCGCACTGC TTTCGTAATCACATT TERM 2508 1809853 - 1809826 - H 75 -2.1 -5.33848 | overlap 1809819 1809827 ATGACAAGTAAAAAA CTCTTTTTCTA TTGTTT TAGGAAAAGAA AGGGGATAAAAATCT TERM 2509 1809971 - 1809953 - H 82 -10.4 -3.73953 | overlap 1809968 ATGATTTTGACTAAA GGCATATA TAA TATATGCC TAATACATAAGGTTC Dhaf_1697 1810117 - 1810242 + | hypothetical protein Dhaf_1698 1810239 - 1811522 + | hypothetical protein TERM 2510 1811592 - 1811553 - f 77 -5 -5.01732 | opp_overlap 1811555 1811560, overlap 1811554 1811555 AAGGTGGCCAAAAAA CTGGAAAGTTTCCTCG GTTAACTT CGGGGAAACTTTCCTT TTAAGCAGATTAGGA TERM 2511 1811591 - 1811554 - f 73 -8.5 -3.60316 | opp_overlap 1811555 1811560, overlap 1811553 1811555 AGGTGGCCAAAAAAC TGGAAAGTTTCCTCG GTTAACTT CGGGGAAACTTTCCT TTTAAGCAGATTAGG TERM 2512 1811555 - 1811590 + F 100 -14.9 -4.09739 | opp_overlap 1811555 1811554 1811553, overlap 1811560 GGTGGCCAAAAAACT GGAAAGTTTCCTCGG TTAACT TCGGGGAAACTTTCC TTTTAAGCAGATTAG TERM 2513 1811590 - 1811555 - f 83 -12 -2.75708 | opp_overlap 1811555 1811560, overlap 1811554 1811553 GGTGGCCAAAAAACT GGAAAGTTTCCTCG GTTAACTT CGGGGAAACTTTCC TTTTAAGCAGATTAG TERM 2514 1811560 - 1811585 + F 76 -7.6 -4.19735 | opp_overlap 1811555 1811554 1811553, overlap 1811555 CCAAAAAACTGGAAA GTTTCCTCGG TTAACT TCGGGGAAAC TTTCCTTTTAAGCAG TERM 2515 1813807 - 1813782 - g 71 -4.8 -4.57341 | gap 1, opp_overlap 1813803, overlap 1813787 AAGCTTCTTGAAAAA GACACGCTCAA AGAGG TTGAGC-TGCC CAATATCGGGACAGT TERM 2516 1815418 - 1815438 + G 78 -12.5 -2.70932 | ATACCTACGAGTTTA CAGCCGGAG GAA CTCCGGCAG TGGTTCCCAACAACC TERM 2517 1815566 - 1815548 - g 74 -11 -2.75992 | overlap 1815545 1815550 GGTGACGGAAGAGCA GAGACAGG CGG CCCGTCTC ACAGAAGGTCATGCC TERM 2518 1816019 - 1816039 + G 79 -11.1 -3.57144 | TACCTATGCCGTGAT GGCCGATCC GGT GGATAGGCC TTTGCGGCTGGCCGG Dhaf_1699 1811673 - 1817423 + | protein of unknown function DUF1533 Dhaf_1700 1817522 - 1818340 + | ABC transporter related TERM 2519 1818814 - 1818832 + G 70 -9.6 -3.14132 | opp_overlap 1818817, overlap 1818817 AGTATTCTGGCTATG GAACCGGA GAT TCTGGTTC TTGATGAGCCCACCG Dhaf_1701 1818331 - 1819209 + | ABC transporter related TERM 2520 1819256 - 1819280 + G 70 -9.9 -3.23692 | GATTCACAGTCTTGA CCCGCGTACCA AGC TGGTTGGCGGG TTCGTAATCATCCTG Dhaf_1702 1819197 - 1819994 + | cobalt transport protein Dhaf_1703 1820137 - 1821072 + | hypothetical protein TERM 2521 1821446 - 1821462 + G 81 -12.3 -3.02947 | GGTGGTTTTACGGCC CGGTACC GAT GGTACCG TATCTCTGCTCGATC Dhaf_1704 1821072 - 1821536 + | hypothetical protein Dhaf_1705 1821567 - 1822154 + | hypothetical protein TERM 2522 1822465 - 1822481 + G 74 -4.3 -4.9725 | AAGCGGGAGAGTGCA CCTGGCT CTG ATCCGGG TTTTTGTCTGGCCAT Dhaf_1706 1822204 - 1822938 + | hypothetical protein Dhaf_1707 1823006 - 1823230 + | hypothetical protein TERM 2523 1824511 - 1824524 + G 76 -9.5 -3.66908 | overlap 1824507 CTTTGACCTCCTTGC CCGCC GGAC GGCGG TTACTTTTGCCGGAA TERM 2524 1824830 - 1824815 - g 89 -6 -5.27023 | opp_overlap 1824817, overlap 1824817 AGGGGAAAAATAAAA CCGTCC CAGG GGCCGG GGCTTGTGGTTGCTT Dhaf_1708 1823258 - 1825183 + | CoB--CoM heterodisulfide reductase TERM 2525 1825279 - 1825303 + T 100 -12.1 -4.86133 | opp_overlap 1825272 1825279 AAAAGTGAGAGTTAA GGAGCTTACCC CAA GGGCAGGCTCC TTTTTGCTGTCTATA TERM 2526 1825303 - 1825279 - T 86 -12.1 -3.15638 | opp_overlap 1825279, overlap 1825272 AAAAGTGAGAGTTAA GGAGCTTACCC CAA GGGCAGGCTCC TTTTTGCTGTCTATA Dhaf_1709 1825902 - 1825321 - | transcriptional regulator, TetR family TERM 2527 1826244 - 1826262 + G 72 -10.3 -3.0264 | opp_overlap 1826244 1826243 GCGTATTTGCTAAAG TCGGCGA GCTTA TCGCCGA TCTTGAAGGGGATTT TERM 2528 1826593 - 1826612 + G 73 -5.6 -4.56597 | overlap 1826595 CACGGTGATCTATCC CATCGCAG CCCG CTGCGGCG TTTTTGCCAAGACCG TERM 2529 1826759 - 1826772 + G 79 -2.3 -5.37043 | overlap 1826723 AACGTGGCATTTCTC GGCGG CCCT CTGTC TTTTTTGTCTGAACT TERM 2530 1827881 - 1827854 - g 71 -4.8 -4.56775 | gap 1, opp_overlap 1827858 ATCGCTCTCGAAAAA GCTGCGCCGGA GTCCGGG TCCGGC-CTGC TCTCAGAACAAATGC TERM 2531 1829642 - 1829618 - g 79 -9.9 -3.88291 | overlap 1829632 TATGAGCGGGACAAA GGGGCGGCAGA CGA TCTGGCGGCCC GCTGGACCCGGCGCA TERM 2532 1830032 - 1830015 - g 79 -10.5 -3.67634 | overlap 1830013 CAGCACTCCAAAACA GCCGCCG CTTC CGGCAGC CCCTGCCCATCGAAG Dhaf_1710 1826090 - 1830355 + | CoA-substrate-specific enzyme activase Dhaf_1711 1830913 - 1830422 - | GCN5-related N-acetyltransferase TERM 2533 1831172 - 1831193 + H 76 -10.9 -2.58134 | opp_overlap 1831172, overlap 1831171 1831169 1831167 1831157 TTTCGAACGGAATGA CCGGCAGTT TTTC AATTGCCGG CTGTGTTCTATTTGA Dhaf_1712 1831309 - 1833009 + | adenine deaminase TERM 2534 1833021 - 1833059 + T 100 -19.6 -4.2074 | opp_overlap 1833021 ATAAGTTGACAAAAA GACTGCCGCCAAGGCCCT ATT AAGGCTTAGGCGGCAGTC TTTGTATCTTAAGAA TERM 2535 1833059 - 1833021 - T 100 -19.6 -4.88388 | opp_overlap 1833021 ATAAGTTGACAAAAA GACTGCCGCCAAGGCCCT ATT AAGGCTTAGGCGGCAGTC TTTGTATCTTAAGAA Dhaf_1713 1835202 - 1833094 - | FMN-binding domain protein TERM 2536 1833233 - 1833245 + g 71 -4.8 -4.59944 | overlap 1833225 GGCAATGCCACGCCG CCGA TGGTT TCGG TTTCTTTCTGCTCGT TERM 2537 1834214 - 1834247 + g 73 -10.1 -3.23219 | opp_overlap 1834211, overlap 1834216 TTTTCCATGACAGCC CCGGCGGTGACCGCC ATGA GGTGGCCGTCGCCCG TCTTCTGGAACTGTT Dhaf_1714 1835576 - 1836034 + | hypothetical protein TERM 2538 1836119 - 1836099 - f 71 -8.3 -3.53091 | opp_overlap 1836099 AGGCTGCTTTTTAAA CTACCGCAT TAT ATGTGGTAG TTTCACTGTATTAAT TERM 2539 1836099 - 1836119 + F 86 -10.5 -3.77177 | opp_overlap 1836099 AGGCTGCTTTTTAAA CTACCGCAT TAT ATGTGGTAG TTTCACTGTATTAAT TERM 2540 1836170 - 1836206 + F 100 -16 -4.30576 | gap 1 AACCGTTGTACTCAG GACGCCCGGCTTTTCCT GCCC AGGGAAGGC-GGGCGTC TTTTCGTGCTGCAGG Dhaf_1715 1836305 - 1838506 + | hypothetical protein TERM 2541 1839071 - 1839053 - gT 76 -11 -2.50016 | overlap 1839052 1839050 GGTGACCATCAACAC CCTGACCA TTC TGGCCAGG TACCTGTTTCCCATC TERM 2542 1839107 - 1839138 + GT 76 -10.8 -2.6381 | gap 1, overlap 1839109 TGCGGATCCGACCTT CTGGCG-GCTGACCG ACC CGGTCGTCGCGCCGG TCATGTCCGCCTTGT TERM 2543 1839109 - 1839149 + GT 82 -10.4 -3.70773 | gap 2, overlap 1839107 CGGATCCGACCTTCT GGCGG-C-TGACCGACCCGG TCG TCGCGCCGGTCATGTCCGCC TTGTTCAGTCTGCCG Dhaf_1717 1841349 - 1840228 - | YibE/F family protein Dhaf_1716 1838739 - 1840286 + | diguanylate cyclase TERM 2544 1841471 - 1841501 + Tr 100 -12.7 -4.49556 | opp_overlap 1841471 CGTATATGATAAAAA GTCATGACAGTGG CCTAA CCACTATCATGAC TTTATTTACTAAAAG TERM 2545 1841501 - 1841471 - TR 100 -15.6 -4.95155 | opp_overlap 1841471 CGTATATGATAAAAA GTCATGACAGTGGC CTA ACCACTATCATGAC TTTATTTACTAAAAG Dhaf_1718 1842379 - 1841522 - | AAA ATPase TERM 2546 1842153 - 1842165 + g 75 -3.3 -5.02074 | TTATAGATGGCATCC CGGGG GAT TTCCG TTTTTTCGGCGATGA TERM 2547 1842503 - 1842480 - H 71 -6.6 -4.20712 | opp_overlap 1842480, overlap 1842472 GATAACACCCCAAAA CGCTGCTCAT CAGG ATGGGCGGCG TTTTTGCGTCCCAGG TERM 2548 1842480 - 1842503 + H 100 -11 -4.65895 | opp_overlap 1842472 1842480 GATAACACCCCAAAA CGCTGCTCAT CAGG ATGGGCGGCG TTTTTGCGTCCCAGG Dhaf_1719 1842661 - 1844214 + | efflux transporter, RND family, MFP subunit Dhaf_1720 1844227 - 1844955 + | ABC transporter related TERM 2549 1845403 - 1845417 + G 71 -8.5 -3.63515 | opp_overlap 1845402 1845403, overlap 1845415 AGGATATCACGAAAT CCGCC CGTGT GGCGG TTGTTGGCCCTACCG Dhaf_1721 1844952 - 1846172 + | protein of unknown function DUF214 TERM 2550 1846327 - 1846317 - g 100 -6.8 -5.61881 | GGCCAAAAAGAAAAA GAGC CTG GCTC TTGCAGTATGCCTGT Dhaf_1722 1846297 - 1847889 + | putative cell wall binding repeat 2-containing protein Dhaf_1723 1849263 - 1847890 - | tyrosine phenol-lyase TERM 2551 1849793 - 1849803 + G 100 -8.2 -5.40072 | GCCGGGTCTATTTTC GGCG AGA CGCC TTTTTTTAACCGCAA Dhaf_1724 1849544 - 1850236 + | transcriptional regulator, Crp/Fnr family TERM 2552 1850264 - 1850308 + F 100 -14.4 -4.39287 | gap 1, opp_overlap 1850264 CGGACAATTCATGAA GGGAGTACCCCTTGGCTGCTT TTTG AGGCGGC-AGGCGGTACTCCC TTTTGCTATGATTGC Dhaf_1725 1850486 - 1851934 + | Na+/H+ antiporter NhaC Dhaf_1726 1852048 - 1853532 + | hypothetical protein TERM 2553 1853566 - 1853603 + F 79 -10.7 -3.09718 | overlap 1853564 1853569 1853572 1853601 1853602 TTTAAGATTGAGAGC GGACCAGGCGTATTTTC TAAT GAAAATACGCCTCCTTC TGATTTTCAGAGTTG TERM 2554 1853569 - 1853600 + F 75 -8.8 -3.68359 | overlap 1853566 1853564 1853572 AAGATTGAGAGCGGA CCAGGCGTATTTTC TAAT GAAAATACGCCTCC TTCTGATTTTCAGAG TERM 2555 1853572 - 1853597 + F 100 -14.9 -2.94331 | overlap 1853569 1853566 1853564 ATTGAGAGCGGACCA GGCGTATTTTC TAAT GAAAATACGCC TCCTTCTGATTTTCA TERM 2556 1854255 - 1854267 + G 71 -9.1 -3.53224 | opp_overlap 1854263, overlap 1854265 TATGGAGGTTATCGA GCGGA ATA TCCGC TTTCAGAAAGAGATG TERM 2557 1854420 - 1854446 + G 79 -11.7 -3.13403 | gap 1, opp_overlap 1854430, overlap 1854418 GACCGGAGCAACGGG CAGCGGG-AAAG AGCT CTTTGCCCGCTG TATTCATCAGAACAG Dhaf_1727 1853872 - 1855320 + | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 2558 1855344 - 1855366 + F 100 -10.7 -5.52384 | overlap 1855329 ACCGGCTATGAGCGG GGGTTAGTT GAAAA AACTAACCC TTTTTTTGATGCACA TERM 2559 1855469 - 1855458 - f 75 -5.8 -4.66609 | GATTTTAGTCAAAAA CCTG CGCT CAGG GCCAAAGACAAGGGT TERM 2560 1856845 - 1856831 - g 76 -10 -3.65522 | CAGCGATCGCAATAA TCCCAC CCA GTGGGA AGCAGACGGTGCTCT Dhaf_1728 1855566 - 1856972 + | trimethylamine methyltransferase TERM 2561 1857564 - 1857574 + G 73 -8.2 -3.86194 | overlap 1857563 TTAAAGGTTATCGTG GGCG GAG CGCC TTTATCCCAGGAATT Dhaf_1729 1857036 - 1857668 + | Methionine synthase TERM 2562 1858476 - 1858488 + G 72 -10.5 -2.94412 | opp_overlap 1858476 1858475 GCCCAAATGATCAAT CCGGG GAC CCCGG TCATTTACGGTTCCC Dhaf_1730 1857699 - 1859129 + | trimethylamine methyltransferase TERM 2563 1860093 - 1860103 + G 73 -8.2 -3.90856 | overlap 1860102 TAACAATACCTTCGA CGCC CTT GGCG TTTACTTGAACGATT Dhaf_1731 1859233 - 1860759 + | BCCT transporter TERM 2564 1861360 - 1861370 + G 73 -8.2 -3.86194 | overlap 1861359 TTGAAGGTTATTGTG GGCG GAG CGCC TTTATCCCAGGAATT Dhaf_1732 1860832 - 1861464 + | Methionine synthase TERM 2565 1861524 - 1861555 + F 100 -11.7 -4.21098 | overlap 1861525 AGTACCAGCGGGATA CGGTTCAGGTAGT CATACC ACTACCTGAACCC TTTTGAACTTACTGT TERM 2566 1861525 - 1861554 + F 100 -15.2 -3.11936 | overlap 1861524 GTACCAGCGGGATAC GGTTCAGGTAGT CATACC ACTACCTGAACC CTTTTGAACTTACTG Dhaf_1733 1861607 - 1862407 + | dihydropteroate synthase DHPS Dhaf_1734 1862442 - 1864418 + | Hydantoinase/oxoprolinase TERM 2567 1864628 - 1864602 - g 76 -2.3 -5.24129 | opp_overlap 1864602 GCGGTGTATAAAAAA GCTGTCC TGGAAGCAAGTGG GGACAGC TCTGTGGTGATTGAG Dhaf_1735 1864449 - 1865114 + | hypothetical protein TERM 2568 1865181 - 1865198 + F 93 -12.7 -3.18118 | overlap 1865179 1865177 CAGGTTGATGCTATT GCCCGGA TGAA TCCGGGC TCTGTTGTAGAGTGG Dhaf_1736 1865234 - 1866754 + | choline/carnitine/betaine transporter Dhaf_1737 1866989 - 1867714 + | prevent-host-death family protein Dhaf_1738 1867834 - 1868151 + | hypothetical protein TERM 2569 1868172 - 1868214 + F 78 -10 -3.48063 | opp_overlap 1868181, overlap 1868181 TTGATTAATAAAGGT GCTGTAAAAGCCTATTCATT TCG GGTGAATGGGCTTTTCTGGC TTCTGGATTTAAATC TERM 2570 1868181 - 1868205 + F 82 -7.9 -4.49337 | opp_overlap 1868181, overlap 1868172 AAAGGTGCTGTAAAA GCCTATTCATT TCG GGTGAATGGGC TTTTCTGGCTTCTGG Dhaf_1739 1868394 - 1868885 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Dhaf_1740 1868966 - 1869643 + | two component transcriptional regulator, winged helix family TERM 2571 1870133 - 1870120 - g 70 -2.3 -5.00616 | GGGCTGCTGAAAAAA GAGGA TTTG TCCGC CGAACAGCGCCGGCG TERM 2572 1870254 - 1870237 - g 71 -7 -3.97088 | opp_overlap 1870236, overlap 1870250 TTGGATAACAGCAAA CTGCCT TTGAAC AGGCAG GATTTCCGCCTGGAT TERM 2573 1870561 - 1870597 + G 71 -8.6 -3.68351 | gap 1, opp_overlap 1870561 TACAAGGCCGACAAA GCCCGCGCCCGTTCGGC AGGC GGC-AACGGGCTGGGGC TTTCCCTGGTCAAGA TERM 2574 1870597 - 1870561 - g 73 -8.6 -3.90328 | gap 1, opp_overlap 1870561 TACAAGGCCGACAAA GCCCGCGCCCGTT-CGG CAGG CGGCAACGGGCTGGGGC TTTCCCTGGTCAAGA Dhaf_1741 1869640 - 1870710 + | histidine kinase TERM 2575 1870722 - 1870771 + F 100 -11.7 -4.39568 | gap 1, opp_overlap 1870722, overlap 1870718 TTAAACTCCATTTAA CCTCCGTTAATTTTGA-ACCTTTA CCA TAAGGGTATCAAAGAAAACGGAGG TTTTGCTATGTCAGT Dhaf_1742 1870856 - 1871800 + | ABC transporter related Dhaf_1743 1871797 - 1872615 + | ABC-2 type transporter TERM 2576 1873430 - 1873414 - g 81 -5.7 -4.90302 | opp_overlap 1873414 GATCAATAAAATAAA GGCCCCG GTG CTGAGCC TTTGGGGTGAGAAGG Dhaf_1744 1872701 - 1873591 + | alpha/beta hydrolase fold protein TERM 2577 1873616 - 1873674 + F 93 -11.9 -3.63744 | gap 1, opp_overlap 1873630 1873637, overlap 1873630 1873637 GGATGCTCTCCACCA GCCGATGGGGAAGAGTTCAAATGATGCA GCGC TGCAACATTTGAACTCTG-CTCAGAGGC TCTTTTGGGAAAGAG TERM 2578 1873630 - 1873661 + F 91 -13.2 -2.78596 | opp_overlap 1873630 1873637, overlap 1873616 1873637 AGCCGATGGGGAAGA GTTCAAATGATGCA GCGC TGCAACATTTGAAC TCTGCTCAGAGGCTC TERM 2579 1873661 - 1873630 - f 95 -13.2 -3.04263 | opp_overlap 1873616 1873630 1873637, overlap 1873637 AGCCGATGGGGAAGA GTTCAAATGATGCA GCGC TGCAACATTTGAAC TCTGCTCAGAGGCTC TERM 2580 1873730 - 1873711 - f 93 -12.2 -3.63991 | GAGGATCGGGAACAA TTGCCGGA TCTG TCCGGCAA GGGAAATAGCCAGGC TERM 2581 1874296 - 1874314 + G 73 -2.4 -5.14477 | opp_overlap 1874286, overlap 1874286 AAAAGTAAACGATTA CGTTTATT TAT ACTAAGCG TTTTTTCAGTATGTA Dhaf_1745 1873795 - 1874661 + | hypothetical protein Dhaf_1746 1874757 - 1875035 + | YCII-related Dhaf_1747 1875083 - 1875517 + | transcriptional regulator, MarR family Dhaf_1748 1877040 - 1875715 - | beta-lactamase domain protein TERM 2582 1875987 - 1876007 + g 87 -6.7 -5.12707 | CATAGACTTTTTCAG CCCCGCCCA TGA TGGCCAGGG TTTTTTCCGCTTTAA TERM 2583 1877841 - 1877861 + G 83 -7.5 -4.82901 | TTTCCGGACATGGCC TGGACAGCG CGA TGCTGGCCA TTTTTGTCAAAGACA Dhaf_1749 1877264 - 1878397 + | putative PAS/PAC sensor protein TERM 2584 1878544 - 1878534 - g 75 -5.4 -4.66833 | CCCGAAGGTCAAAAA GTTC TTT GAAC AATTGAAAAGGGATG Dhaf_1750 1878427 - 1878642 + | hypothetical protein TERM 2585 1878646 - 1878669 + F 100 -10.4 -5.44119 | overlap 1878643 GGGAATGGCTGATCT TGAAGCAGGA CTTT TCCTGCTTTA TTTTTTTACGCTGGA Dhaf_1751 1878838 - 1880007 + | diguanylate cyclase TERM 2586 1880394 - 1880380 - g 78 -5.6 -5.00616 | overlap 1880365 1880364 GGTTTCTGGAAAAAA CCTCAG ACA CTGTGG AGGAAATGCAGATCT Dhaf_1752 1880013 - 1880699 + | two component transcriptional regulator, winged helix family TERM 2587 1882247 - 1882231 - g 90 -10.1 -4.41206 | AATCAGTGTAGAAAA CCAGGGA AGC CCCCTGG CAGAAGCAGACAGGA TERM 2588 1882389 - 1882402 + G 77 -3.1 -5.33026 | gap 1, opp_overlap 1882386, overlap 1882389 1882390 GTGTGGAAAATACCC G-GGAC GGC GTCCGC TTTTTCTTTACCTTG Dhaf_1753 1880696 - 1882432 + | histidine kinase TERM 2589 1882438 - 1882488 + F 71 -4 -4.87052 | gap 1, overlap 1882427 1882440 1882443 GCAGCCCTGATTTGT ATCGAGGGGTTTAGATTTCCGCC GTTTTG GGC-GATCTCTAAACCCCTTGTC TTTTATTAATTTGTA TERM 2590 1882440 - 1882486 + F 90 -11 -4.03104 | gap 1, overlap 1882427 1882438 1882443 AGCCCTGATTTGTAT CGAGGGGTTTAGATTTCCGCC GTTTTG GGC-GATCTCTAAACCCCTTG TCTTTTATTAATTTG TERM 2591 1882443 - 1882483 + F 83 -9.1 -4.09554 | gap 1, overlap 1882427 1882440 1882438 CCTGATTTGTATCGA GGGGTTTAGATTTCCGCC GTTTTG GGC-GATCTCTAAACCCC TTGTCTTTTATTAAT Dhaf_1754 1882612 - 1883691 + | Outer membrane protein-like protein Dhaf_1755 1883712 - 1884926 + | hypothetical protein Dhaf_1756 1884944 - 1885636 + | two component transcriptional regulator, winged helix family TERM 2592 1886882 - 1886892 + G 73 -8.2 -3.85817 | CGCACACCCGTATCG GCCC TCA GGGC TTTATCGGAAACACT Dhaf_1757 1885670 - 1887514 + | PAS/PAC sensor signal transduction histidine kinase TERM 2593 1887658 - 1887602 - f 82 -10.2 -3.66028 | opp_overlap 1887605 1887607 1887657, overlap 1887604 1887612 TATAATGCCTAACAA TAGTTTACAAGGGCAGATGACTCCCG TATAC CGGAAGTTATCTGCCCTTGTATGTTT ATGCTTGCCATAATC TERM 2594 1887656 - 1887604 - f 100 -12.8 -3.40498 | opp_overlap 1887605 1887607, overlap 1887602 1887612 TAATGCCTAACAATA GTTTACAAGGGCAGATGACTCCCG TATAC CGGAAGTTATCTGCCCTTGTATGT TTATGCTTGCCATAA TERM 2595 1887605 - 1887655 + F 100 -18.5 -4.0616 | opp_overlap 1887604 1887602 1887612, overlap 1887607 AATGCCTAACAATAG TTTACAAGGGCAGATGACTCCCG TATAC CGGAAGTTATCTGCCCTTGTATG TTTATGCTTGCCATA TERM 2596 1887607 - 1887653 + F 100 -23.3 -3.6217 | opp_overlap 1887604 1887602 1887612, overlap 1887605 TGCCTAACAATAGTT TACAAGGGCAGATGACTCCCG TATAC CGGAAGTTATCTGCCCTTGTA TGTTTATGCTTGCCA TERM 2597 1887648 - 1887612 - f 100 -17.4 -3.37876 | opp_overlap 1887607 1887605, overlap 1887604 1887602 AACAATAGTTTACAA GGGCAGATGACTCCCG TATAC CGGAAGTTATCTGCCC TTGTATGTTTATGCT TERM 2598 1887834 - 1887818 - g 78 -7.9 -4.4017 | GCAAGGCTCATAAAA GCAGGGG ATA CCCTTGC CAAATCCCTGGCCAT Dhaf_1758 1887752 - 1888153 + | hypothetical protein Dhaf_1759 1888210 - 1889583 + | efflux transporter, RND family, MFP subunit TERM 2599 1890147 - 1890157 + G 80 -6.8 -4.7373 | GGTCACAGGACGGAT GGTC ATG GACC TTTTTCATCAGATCC Dhaf_1760 1889596 - 1890348 + | ABC transporter related TERM 2600 1891363 - 1891353 - g 76 -8.2 -3.99678 | opp_overlap 1891353 1891354, overlap 1891354 ATCGGGACAAGGAAA GCCC TGG GGGC CAGGAATTCTTATAT Dhaf_1761 1890345 - 1891619 + | protein of unknown function DUF214 TERM 2601 1891624 - 1891636 + F 86 -3.3 -5.68438 | GCTATGAATAACAGG GTTGG ATA CCGGC TTTTTTCTTTCCTAA TERM 2602 1891705 - 1891758 + F 100 -14.8 -3.73224 | opp_overlap 1891706 1891718, overlap 1891706 1891710 1891718 GAATAAGATAAGCAG AGGTACAGC-AAAACAGGCCGGCAGT GACA AC-GCCGGCCTGTTTTAGTTGTTCCG TTTAATAAAAACTGC TERM 2603 1891706 - 1891757 + F 100 -18.3 -2.8372 | opp_overlap 1891706 1891718, overlap 1891705 1891710 1891718 AATAAGATAAGCAGA GGTACAGC-AAAACAGGCCGGCAGT GACA AC-GCCGGCCTGTTTTAGTTGTTCC GTTTAATAAAAACTG TERM 2604 1891757 - 1891706 - f 100 -16.1 -3.03821 | opp_overlap 1891706 1891705 1891710 1891718, overlap 1891718 AATAAGATAAGCAGA GGTACAGC-AAAACAGGCCGGCAGT GACA AC-GCCGGCCTGTTTTAGTTGTTCC GTTTAATAAAAACTG TERM 2605 1891710 - 1891753 + F 100 -16.3 -3.30701 | opp_overlap 1891706 1891718, overlap 1891706 1891705 1891718 AGATAAGCAGAGGTA CAGC-AAAACAGGCCGGCAGT GACA AC-GCCGGCCTGTTTTAGTTG TTCCGTTTAATAAAA TERM 2606 1891744 - 1891718 - f 100 -14.5 -4.36262 | gap 1, opp_overlap 1891718 1891710 1891706 1891705, overlap 1891706 AGAGGTACAGCAAAA CAGGCCGGCAGT GACA AC-GCCGGCCTG TTTTAGTTGTTCCGT TERM 2607 1891718 - 1891744 + F 100 -14.5 -4.56736 | gap 1, opp_overlap 1891706 1891718, overlap 1891710 1891706 1891705 AGAGGTACAGCAAAA CAGGCCGGCAGT GACA AC-GCCGGCCTG TTTTAGTTGTTCCGT Dhaf_1762 1891877 - 1892506 + | lipolytic protein G-D-S-L family Dhaf_1763 1892518 - 1893924 + | membrane bound O-acyl transferase MBOAT family protein Dhaf_1764 1894040 - 1894345 + | hypothetical protein Dhaf_1765 1895199 - 1894342 - | beta-lactamase domain protein TERM 2608 1895068 - 1895052 - G 100 -10.9 -4.84017 | AATTCTGCAGAAAAA TACCGGT ATG ACCGGTA TCAAAAAGAACCTTT Dhaf_1766 1895606 - 1895932 + | hypothetical protein TERM 2609 1896210 - 1896239 + T 100 -14.5 -3.71649 | opp_overlap 1896213, overlap 1896213 ATGGAATTATTAGAT TAAGCACTGAACA ACTG TGTTCAGTGCTTG TTTGCAATTTGAGGC TERM 2610 1896236 - 1896213 - T 100 -14 -3.31157 | opp_overlap 1896210 1896213 GAATTATTAGATTAA GCACTGAACA ACTG TGTTCAGTGC TTGTTTGCAATTTGA TERM 2611 1896213 - 1896236 + T 100 -14 -3.98804 | opp_overlap 1896213, overlap 1896210 GAATTATTAGATTAA GCACTGAACA ACTG TGTTCAGTGC TTGTTTGCAATTTGA Dhaf_1767 1897711 - 1896230 - | ABC transporter related TERM 2612 1896409 - 1896419 + g 77 -6.8 -4.59853 | overlap 1896402 1896401 AGATGATTTTGCCCT GCTG GGC CAGC TTTTTCAGGAGTTCC TERM 2613 1896768 - 1896758 - G 79 -2.4 -5.40072 | opp_overlap 1896759, overlap 1896759 1896760 GCCTTTCCAAAAAAA GCTG CCC CCGC AGTCCTTGTGCAGGC TERM 2614 1897113 - 1897134 + g 75 -5.1 -4.67755 | ATAAGATAGTGGAGC CGGTGTTCG GCAA TGAGCACTG TTTTTCCCTGGCTCT Dhaf_1768 1898422 - 1897724 - | cobalt transport protein TERM 2615 1898201 - 1898215 + g 76 -7 -4.36914 | overlap 1898199 CAGGGTTGTCTCCCC GCCGGC AAG GGCGGC TTTTGTCAAAAGAAA Dhaf_1769 1899030 - 1898419 - | hypothetical protein TERM 2616 1898642 - 1898623 - G 71 -2.8 -5.00616 | overlap 1898636 CGGGTCGGCAAAAAA GCAGAGAT AGGA ACCTGTGC AGCCAAGGCTCAGGC TERM 2617 1899099 - 1899124 + H 75 -10.6 -2.8805 | opp_overlap 1899099, overlap 1899104 GGATATGTGCTAATA TCACAGTTAG ACGAAG CTAACTGTGA TATCTCAAACATACT TERM 2618 1899124 - 1899099 - H 76 -10.6 -3.03771 | opp_overlap 1899099 1899104 GGATATGTGCTAATA TCACAGTTAG ACGAAG CTAACTGTGA TATCTCAAACATACT TERM 2619 1899575 - 1899588 + G 70 -9.5 -3.09933 | CCGGGTGCTGATTCA CGGGG GAAT CCCCG TTCGCTGCATTGGCA Dhaf_1770 1899228 - 1900190 + | transcriptional regulator, AraC family Dhaf_1771 1900318 - 1900449 + | hypothetical protein Dhaf_1772 1900427 - 1901338 + | aminoglycoside phosphotransferase Dhaf_1773 1901344 - 1902249 + | VanW family protein Dhaf_1774 1902294 - 1902518 + | hypothetical protein TERM 2620 1902554 - 1902539 - T 100 -6.1 -5.58454 | opp_overlap 1902538 1902539, overlap 1902522 GGCAGAGCAAAAAAA CAGCC GGTTAG GGCTG CTTTGGATGATACAT Dhaf_1775 1902811 - 1902587 - | hypothetical protein Dhaf_1776 1903240 - 1902815 - | hypothetical protein Dhaf_1777 1904112 - 1903321 - | hypothetical protein TERM 2621 1903549 - 1903531 - G 75 -10.2 -3.34344 | opp_overlap 1903545 1903546, overlap 1903544 TGAGGTGTTAAGGAA GCCGGCTG AAG CAGCCGCC GCCAGGCGGTGTCCT TERM 2622 1903853 - 1903838 - G 73 -10.4 -3.22077 | overlap 1903836 1903847 GGCATAAAAAGGATA CCGGCA AAGG TGCCGG CCGTGGCCGCCAAGA Dhaf_1778 1905097 - 1904204 - | transcriptional regulator, LysR family TERM 2623 1905123 - 1905137 + H 77 -8.6 -4.0371 | opp_overlap 1905122, overlap 1905122 1905134 1905135 CTTTGGTCTTAACAT GCAACT TGC AGTTGC TTTATGTCAAACATA TERM 2624 1905137 - 1905155 + H 71 -9 -3.25567 | overlap 1905135 1905134 TGCAACTTGCAGTTG CTTTATGT CAA ACATAAAG TGCTTTTTCAAGTAT Dhaf_1779 1905240 - 1907000 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein Dhaf_1780 1907036 - 1907419 + | FMN-binding domain protein Dhaf_1781 1908237 - 1907455 - | alpha/beta hydrolase fold protein TERM 2625 1907518 - 1907507 - G 81 -5.8 -4.8667 | overlap 1907509 GATACCGGAGAAAAA TGCC CGCC GGCA GGAAGCCGATATAGA TERM 2626 1907706 - 1907738 + g 100 -12.8 -4.83169 | opp_overlap 1907698, overlap 1907708 AATTAACCCGGTTGT TCCAGAGCCTGGAG GTAAG CTTCAGGCTCTGCA TTTTTCTCAGACCCT TERM 2627 1907708 - 1907736 + g 95 -15.4 -2.6933 | opp_overlap 1907698, overlap 1907706 TTAACCCGGTTGTTC CAGAGCCTGGAG GTAAG CTTCAGGCTCTG CATTTTTCTCAGACC Dhaf_1782 1909448 - 1908234 - | Radical SAM domain protein Dhaf_1783 1910343 - 1909441 - | Methyltransferase type 11 Dhaf_1784 1910984 - 1910340 - | Methyltransferase type 11 TERM 2628 1910858 - 1910870 + g 77 -10.5 -3.53012 | TAAAGGGTTCTGGCG GGCCG GGC CGGCC TTTAGCGGCCAGAGC TERM 2629 1911098 - 1911059 - g 100 -15.2 -4.33417 | opp_overlap 1911061, overlap 1911061 TTCAGTCATAAGAAA GACCTCCCTTATGGTGTA ATTT TACACTATAAGGGAGGTT CTGTCTATAATGTTT TERM 2630 1911096 - 1911061 - g 100 -17.8 -3.76888 | opp_overlap 1911061, overlap 1911059 CAGTCATAAGAAAGA CCTCCCTTATGGTGTA ATTT TACACTATAAGGGAGG TTCTGTCTATAATGT TERM 2631 1911061 - 1911096 + G 100 -20 -3.66058 | opp_overlap 1911059 1911061 CAGTCATAAGAAAGA CCTCCCTTATGGTGTA ATTT TACACTATAAGGGAGG TTCTGTCTATAATGT Dhaf_1785 1911041 - 1911196 + | hypothetical protein TERM 2632 1911391 - 1911416 + G 88 -13.3 -3.09635 | CTTGATATCAGTATT CTGCCCATCGG AAAG CTGGTGGGCAG TTCGCTGATCCGGCT Dhaf_1786 1911205 - 1912842 + | protein of unknown function DUF1538 Dhaf_1787 1912835 - 1913161 + | hypothetical protein TERM 2633 1913473 - 1913454 - g 85 -7.8 -4.7497 | GCCATCCAGGAAAAA GCGGGG CTGAACTC CCCCGC CAACGGTATTTGCTT Dhaf_1788 1913214 - 1913525 + | nitrogen regulatory protein P-II TERM 2634 1913536 - 1913568 + T 82 -7.8 -4.41548 | opp_overlap 1913539, overlap 1913539 AATAATAGTACAGAG CAAGCCGATTGGGA CATGA TCTTAATCGGCTTA TTTTATAGGGTATAG TERM 2635 1913539 - 1913565 + T 88 -9.5 -4.32067 | opp_overlap 1913539, overlap 1913536 AATAGTACAGAGCAA GCCGATTGGGA CATGA TCTTAATCGGC TTATTTTATAGGGTA Dhaf_1789 1914387 - 1913791 - | transcriptional regulator, XRE family TERM 2636 1914477 - 1914430 - R 89 -12.1 -3.38316 | gap 2, opp_overlap 1914442 1914442, overlap 1914431 TTATCACTGAACTAA TCCGCCC-TAAGACCC-CTGCCT CTAT AGGCAGCGGGTTTCAAGGGCGGT AAGTCCAGTATAGAT TERM 2637 1914476 - 1914431 - R 100 -15.6 -2.62668 | gap 2, opp_overlap 1914442 1914442, overlap 1914430 TATCACTGAACTAAT CCGCCC-TAAGACCC-CTGCCT CTAT AGGCAGCGGGTTTCAAGGGCGG TAAGTCCAGTATAGA TERM 2638 1914442 - 1914463 + r 71 -10.1 -2.71924 | opp_overlap 1914431 1914430, overlap 1914442 TAATCCGCCCTAAGA CCCCTGCCT CTAT AGGCAGCGG GTTTCAAGGGCGGTA TERM 2639 1914442 - 1914464 + r 78 -9.9 -3.53444 | gap 1, opp_overlap 1914431 1914430, overlap 1914442 TAATCCGCCCTAAGA CCC-CTGCCT CTAT AGGCAGCGGG TTTCAAGGGCGGTAA Dhaf_1790 1916533 - 1914497 - | ATPase associated with various cellular activities AAA_5 TERM 2640 1915003 - 1914970 - G 71 -7.4 -4.07786 | gap 1, opp_overlap 1914978 TACAAAATTCATAAA CTGCC-ACAGCCGCC TGTTT GGCGGCTGTTAACCG TCCAAAGGCACTCAT TERM 2641 1914978 - 1914994 + g 74 -10.8 -3.04144 | opp_overlap 1914970 TCATAAACTGCCACA GCCGCC TGTTT GGCGGC TGTTAACCGTCCAAA TERM 2642 1915631 - 1915651 + g 73 -7.6 -4.08692 | gap 1, overlap 1915646 TTGGGACACCTTTTC CAGGGC-TG CCAA CATGCCCTG TTTTGCCAGAGCTTG TERM 2643 1915697 - 1915715 + g 75 -10.4 -3.40403 | opp_overlap 1915711, overlap 1915683 TTCATCGGGATCGGT GGTGATTT TAT AAATCACC TTGTGATAGAGGGCC Dhaf_1791 1917048 - 1916590 - | hypothetical protein Dhaf_1792 1917392 - 1917045 - | hypothetical protein TERM 2644 1917464 - 1917498 + H 100 -8.9 -4.8269 | gap 2 AGACTAACTAGTTTT GAGGCTATGCTTTTCTT GTT AAGAAA--CATAGCCTC TTTTTGCTGATTATA TERM 2645 1918688 - 1918668 - g 88 -11.9 -3.86897 | opp_overlap 1918667 GCGATGCTGCAGAAA TGGCTGCTC CTG AAGCAGCCA ATGTGGTTAACGCTA Dhaf_1793 1917842 - 1918882 + | TRAP dicarboxylate transporter- DctP subunit TERM 2646 1918928 - 1918885 - f 86 -8.8 -4.41047 | gap 1, overlap 1918887 1918888 AGTGCTGAATTAAAA GACTTCTCCGGAGGGTTGGGC ACA GTCCAACCCTCCGGAATTA-C AAAAAGGAGTGACTA TERM 2647 1918927 - 1918887 - f 100 -12.5 -3.8125 | overlap 1918885 1918888 TGCTGAATTAAAAGA CTTCTCCGGAGGGTTGGGC ACA GTCCAACCCTCCGGAATTA CAAAAAGGAGTGACT TERM 2648 1918926 - 1918888 - f 95 -13.8 -2.88268 | overlap 1918887 1918885 GCTGAATTAAAAGAC TTCTCCGGAGGGTTGGGC ACA GTCCAACCCTCCGGAATT ACAAAAAGGAGTGAC Dhaf_1794 1918947 - 1919474 + | Tripartite ATP-independent periplasmic transporter DctQ component TERM 2649 1919723 - 1919709 - g 73 -2.2 -5.02074 | TCATGGGCGAAAAAA TTATTA ATT TAACAA AGGAGATGGTAGGCC TERM 2650 1919744 - 1919725 - g 71 -6.4 -4.26351 | overlap 1919726 TATTAATTTAACAAA GGAGATGG TAGG CCATCTCA AAGGCGGGATTGCCA TERM 2651 1919743 - 1919726 - g 70 -9.9 -3.15087 | overlap 1919725 ATTAATTTAACAAAG GAGATGG TAGG CCATCTC AAAGGCGGGATTGCC Dhaf_1795 1919471 - 1920757 + | TRAP dicarboxylate transporter, DctM subunit Dhaf_1796 1920807 - 1921931 + | isocitrate/isopropylmalate dehydrogenase TERM 2652 1923087 - 1923070 - g 71 -7 -4.09685 | GCTGACGGGGCAAAA CGGATG ACGAAA CATCCG CGGGGTTTAACCATC Dhaf_1797 1921933 - 1923108 + | peptidase M24 TERM 2653 1923665 - 1923680 + G 73 -5.4 -4.51197 | overlap 1923663 1923666 TTTACCAAAGTTGCT TCCTTC GGAG GAAGGG TTTTGGTTCATTGTG Dhaf_1798 1923158 - 1924492 + | dihydroorotase, multifunctional complex type Dhaf_1799 1924506 - 1925468 + | malate dehydrogenase, NAD-dependent TERM 2654 1926682 - 1926648 - g 77 -2.8 -5.27938 | gap 1, opp_overlap 1926658 1926671, overlap 1926649 ATGGGCAAACAAAAA GCC-GCTTAATCTCC AACAAG GGAGTCTTAGCAGGC TATCGTACAACGGAT Dhaf_1800 1925579 - 1927150 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2655 1927209 - 1927173 - T 70 -7.2 -3.83026 | opp_overlap 1927178, overlap 1927174 CCTGCCGATATGAAA CTTCAGAGCGGATGCC TGCGC GGCATCCGCTCTTTCA ATAAAAAGCTTAAAA TERM 2656 1927178 - 1927204 + T 100 -18.1 -3.64822 | opp_overlap 1927174 1927173 CGATATGAAACTTCA GAGCGGATGCC TGCGC GGCATCCGCTC TTTCAATAAAAAGCT Dhaf_1801 1928907 - 1927219 - | transcriptional regulator, PucR family TERM 2657 1927601 - 1927613 + g 75 -3.4 -5.01732 | GATAAAGCGGTTTTG GCTT CTTTA AAGC TTTTTTCCACCAGTT TERM 2658 1928175 - 1928195 + g 77 -2.6 -5.28176 | overlap 1928178 TTTTATTGGAAAAGA TGGGAAAC ATGTA GTTTCTTA TTTTTTCTGAATGAG TERM 2659 1928178 - 1928192 + g 71 -4.3 -4.73105 | overlap 1928175 TATTGGAAAAGATGG GAAAC ATGTA GTTTC TTATTTTTTCTGAAT Dhaf_1803 1929489 - 1929779 + | DNA polymerase beta domain protein region Dhaf_1804 1929776 - 1930120 + | protein of unknown function DUF86 TERM 2660 1930198 - 1930141 - f 72 -9.4 -3.23572 | gap 2, overlap 1930143 AGGGACTTCACAACA GAGGGTTTGCGACATTGGGG-AGTA-AT ATGA ATGTAATACCCCGACGTCGCAAACCCTT GAAACGTTAGGCGGA TERM 2661 1930196 - 1930143 - f 86 -12 -3.18118 | gap 2, overlap 1930141 GGACTTCACAACAGA GGGTTTGCGACATTGGGG-AGTA-AT ATGA ATGTAATACCCCGACGTCGCAAACCC TTGAAACGTTAGGCG TERM 2662 1930206 - 1930224 + F 70 -9.6 -2.89138 | opp_overlap 1930204, overlap 1930205 1930209 AAACCCTTGAAACGT TAGGCGGA ATC TCCGCTTA CTTTAATCCTGCTTT TERM 2663 1930209 - 1930221 + F 75 -9.1 -3.58162 | opp_overlap 1930204, overlap 1930206 1930205 CCCTTGAAACGTTAG GCGGA ATC TCCGC TTACTTTAATCCTGC TERM 2664 1931277 - 1931264 - f 71 -2.4 -5.19328 | opp_overlap 1931267 ATTTTACAACAAAAA GAAG GAGAAG CTTC TATGATTTAAGAAAC Dhaf_1806 1931354 - 1932070 + | hypothetical protein Dhaf_1807 1932136 - 1932711 + | hypothetical protein TERM 2665 1933328 - 1933305 - f 79 -8 -4.27192 | opp_overlap 1933307, overlap 1933306 AAAGCTGTAGTAAAA GGGGCCGCCA TCCT TGGCGGCCTT TGAATATAGGGGCCT TERM 2666 1933327 - 1933306 - f 84 -11.5 -3.15592 | opp_overlap 1933307, overlap 1933305 AAGCTGTAGTAAAAG GGGCCGCCA TCCT TGGCGGCCT TTGAATATAGGGGCC TERM 2667 1933307 - 1933326 + F 100 -15 -3.70902 | opp_overlap 1933306 1933305 AGCTGTAGTAAAAGG GGCCGCCA TCCT TGGCGGCC TTTGAATATAGGGGC Dhaf_1808 1933374 - 1934846 + | YcdC TERM 2668 1934921 - 1934948 + F 79 -7.8 -4.27316 | opp_overlap 1934921 1934920 AAATTCCCAAATAAG CGGTTGCATT ACGAAAAA AATGCAGCCG TTTTCAATTGCACAG Dhaf_1809 1935109 - 1935930 + | transcriptional regulator, AraC family Dhaf_1810 1936075 - 1937061 + | periplasmic binding protein TERM 2669 1937070 - 1937103 + F 100 -15.3 -4.36903 | opp_overlap 1937067 1937070 CAAGTAGAAAATTTA CCGGGCGTTGCCTGT TCGG ACGGCCAACGCTCGG TTTCTCTTTGCTGAA TERM 2670 1937103 - 1937070 - f 77 -10.9 -2.82606 | opp_overlap 1937070, overlap 1937067 CAAGTAGAAAATTTA CCGGGCGTTGCCTGT TCGG ACGGCCAACGCTCGG TTTCTCTTTGCTGAA TERM 2671 1937185 - 1937203 + G 76 -8.8 -3.98661 | opp_overlap 1937187 GTTTCTGCGGTACTA CAGCCCCT ACA AGGGACTG TTTCTCCTGGATGTC TERM 2672 1937449 - 1937467 + G 77 -3.1 -5.19212 | GATTTACACTCATCT GCAAAAG CTGTC CTTTCGC TTTTTTGATAATCAT TERM 2673 1937715 - 1937730 + G 76 -2.4 -5.24531 | opp_overlap 1937707, overlap 1937719 CCAGAAAGCGCATGT TCGGCG CTGT CGGCGG TTTTTTGTCAAGGCT Dhaf_1811 1937156 - 1938874 + | ABC transporter related TERM 2674 1939125 - 1939165 + G 73 -8.2 -3.83026 | gap 1 TTATCGTGGATCTCC GTCTGCCCCGGGTCATCGC CAGT GCCATGGTC-GGGGCGGCC TTTGCTGTGGCCGGA TERM 2675 1939399 - 1939427 + G 71 -6.7 -4.26076 | gap 1, overlap 1939400 CACTCCCATGCGGCT G-GTGCTGGCCG GTGCCG CGGTCAGCGCTC TTTTGATCGCCCTCA TERM 2676 1939400 - 1939425 + G 79 -10.4 -3.7331 | overlap 1939399 ACTCCCATGCGGCTG GTGCTGGCCG GTGCCG CGGTCAGCGC TCTTTTGATCGCCCT TERM 2677 1939548 - 1939580 + G 71 -8.4 -3.67417 | gap 1, opp_overlap 1939534 1939544 1939547 AGATCATGACACCAT GGATCCTGGGCGCCC TGCT GGGGGCC-ATGATCC TTTCCCGTTCCATCT Dhaf_1812 1938896 - 1939948 + | transport system permease protein Dhaf_1813 1939948 - 1941003 + | transport system permease protein TERM 2678 1941621 - 1941633 + G 71 -9.1 -3.57119 | overlap 1941624 CCTCCACGATCTGAA CCTGG CGG CCAGG TTTGCCGACTATATG Dhaf_1814 1941019 - 1941846 + | ABC transporter related Dhaf_1815 1941843 - 1942598 + | Nitrogenase Dhaf_1816 1942595 - 1943956 + | oxidoreductase/nitrogenase component 1 TERM 2679 1945007 - 1944993 - g 80 -4.2 -5.31275 | GGGGAGCATAAAAAA GGCC TGCTCAT GGCC AGCGGTGAAGCTCTG Dhaf_1817 1943937 - 1945169 + | oxidoreductase/nitrogenase component 1 TERM 2680 1945234 - 1945204 - g 100 -9.7 -4.93696 | gap 1, overlap 1945205 1945207 GGTAAATATGAAAAA GGAGCGCCGGCCAG ATTT CTGGCCGA-GCTGC GCATCCAACGGGCCA TERM 2681 1945231 - 1945207 - g 73 -10 -3.33169 | gap 1, overlap 1945204 1945205 AAATATGAAAAAGGA GCGCCGGCCAG ATTT CTGGCCGA-GC TGCGCATCCAACGGG Dhaf_1818 1945153 - 1945392 + | transcriptional regulator, AraC family TERM 2682 1945422 - 1945473 + F 100 -33.6 -2.72991 | opp_overlap 1945425, overlap 1945425 AGAGGGCGGGCTGTA TAAGAGGGCTCGTAAGATTCGAAT CTGG ATTCGAATCTTACGAGCCCTCTTA TGGTTCACAATATAA TERM 2683 1945425 - 1945470 + F 100 -30.9 -3.51329 | opp_overlap 1945425, overlap 1945422 GGGCGGGCTGTATAA GAGGGCTCGTAAGATTCGAAT CTGG ATTCGAATCTTACGAGCCCTC TTATGGTTCACAATA TERM 2684 1945470 - 1945425 - f 100 -30.9 -3.28712 | opp_overlap 1945422 1945425 GGGCGGGCTGTATAA GAGGGCTCGTAAGATTCGAAT CTGG ATTCGAATCTTACGAGCCCTC TTATGGTTCACAATA Dhaf_1819 1945620 - 1946357 + | filamentation induced by cAMP protein Fic TERM 2685 1946435 - 1946402 - f 100 -14.7 -3.60348 | opp_overlap 1946402 GTGAATAGCATATAA GCGCCTTTTAGCTTC AATT GAAACTGAAAGGCGC TTTTTTATCAGAGGT TERM 2686 1946402 - 1946435 + F 100 -14.7 -5.24531 | opp_overlap 1946402 GTGAATAGCATATAA GCGCCTTTTAGCTTC AATT GAAACTGAAAGGCGC TTTTTTATCAGAGGT TERM 2687 1946729 - 1946768 + F 80 -3.8 -5.28481 | gap 2, opp_overlap 1946733, overlap 1946733 1946739 GCTCATAACATGAGA AAAATGGCA-G-CTACCT TGGGAT AGGTAGTCTTGCCATTTA TTTTTTGATTAAATC TERM 2688 1946733 - 1946764 + F 80 -4.6 -5.12785 | gap 2, opp_overlap 1946733, overlap 1946729 1946739 ATAACATGAGAAAAA TGGCA-G-CTACCT TGGGAT AGGTAGTCTTGCCA TTTATTTTTTGATTA TERM 2689 1946764 - 1946733 - f 77 -4.6 -4.9934 | gap 2, opp_overlap 1946733 1946729 1946739 ATAACATGAGAAAAA TGGCA-G-CTACCT TGGGAT AGGTAGTCTTGCCA TTTATTTTTTGATTA TERM 2690 1946836 - 1946801 - f 78 -9.8 -3.53012 | gap 1, opp_overlap 1946802 1946803, overlap 1946803 CTTTTTGGGTTTAAA GAGGGCCGTGAGAAA ATTAAGA TTTCACACGGCCC-C TTTAGAATGACGTTA TERM 2691 1946802 - 1946836 + F 80 -10 -3.61103 | opp_overlap 1946801 1946803, overlap 1946803 TTTTTGGGTTTAAAG AGGGCCGTGAGAAA ATTAAGA TTTCACACGGCCCC TTTAGAATGACGTTA TERM 2692 1946803 - 1946835 + F 93 -13.5 -2.7634 | opp_overlap 1946801 1946803, overlap 1946802 TTTTGGGTTTAAAGA GGGCCGTGAGAAA ATTAAGA TTTCACACGGCCC CTTTAGAATGACGTT TERM 2693 1946835 - 1946803 - f 100 -13.5 -3.34398 | opp_overlap 1946803 1946802, overlap 1946801 TTTTGGGTTTAAAGA GGGCCGTGAGAAA ATTAAGA TTTCACACGGCCC CTTTAGAATGACGTT TERM 2694 1946913 - 1946889 - f 78 -4.2 -5.18357 | opp_overlap 1946892, overlap 1946890 1946892 TAAGGTAGCAAAAAA GTAGGCTGTC TCGGT GACAGCCTTT TTTGCACTAATTGAA TERM 2695 1946912 - 1946890 - f 70 -7.7 -3.6993 | opp_overlap 1946892, overlap 1946889 1946892 AAGGTAGCAAAAAAG TAGGCTGTC TCGGT GACAGCCTT TTTTGCACTAATTGA TERM 2696 1946892 - 1946910 + F 100 -10.3 -5.07053 | opp_overlap 1946890 1946889 1946892 GGTAGCAAAAAAGTA GGCTGTC TCGGT GACAGCC TTTTTTGCACTAATT TERM 2697 1946910 - 1946892 - f 80 -10.3 -3.41701 | opp_overlap 1946892, overlap 1946890 1946889 GGTAGCAAAAAAGTA GGCTGTC TCGGT GACAGCC TTTTTTGCACTAATT TERM 2698 1947162 - 1947150 - f 72 -6.3 -4.2803 | CACTTGAAGGTAAAA TTACG TAC CGTAA ACTGAGCCTACAGCT Dhaf_1821 1947889 - 1949397 + | sodium/sulphate symporter TERM 2699 1949424 - 1949449 + F 100 -13.3 -3.76232 | overlap 1949425 CCACATATATTGAGC AGGCGGGGAAA TTAA TTTCCCCGCCA TTATCTGTTTCAGGC TERM 2700 1949425 - 1949448 + F 100 -16.8 -2.85257 | overlap 1949424 CACATATATTGAGCA GGCGGGGAAA TTAA TTTCCCCGCC ATTATCTGTTTCAGG TERM 2701 1951305 - 1951346 + G 72 -10.1 -3.0263 | gap 1, opp_overlap 1951311, overlap 1951311 TCCGATCCCTAGGCT GGATA-ACCGCCGCTTCCGG GTA CCGGAAGCGGCAGCGTGTAC TGTTGAAAACGTCGT TERM 2702 1951339 - 1951311 - g 100 -22.5 -3.30124 | opp_overlap 1951305 1951311 CCCTAGGCTGGATAA CCGCCGCTTCCGG GTA CCGGAAGCGGCAG CGTGTACTGTTGAAA TERM 2703 1951311 - 1951341 + G 88 -14.1 -2.9155 | gap 2, opp_overlap 1951311, overlap 1951305 CCCTAGGCTGGATAA C-C-GCCGCTTCCGG GTA CCGGAAGCGGCAGCG TGTACTGTTGAAAAC TERM 2704 1951414 - 1951397 - g 83 -4.2 -5.44119 | GCTATGCTAAAAAAA TGGATA TGTGCG TATCCA ATCTTAAATAAAGGA Dhaf_1822 1950001 - 1951425 + | hypothetical protein Dhaf_1823 1951442 - 1952875 + | hypothetical protein TERM 2705 1953238 - 1953252 + G 77 -6.4 -4.63486 | overlap 1953239 ATATAGTCCTGCTCG TCATGG TTG CCATGG TTTTGTTCGGCGCCT Dhaf_1824 1952913 - 1954427 + | sodium/sulphate symporter TERM 2706 1954453 - 1954480 + F 76 -10 -3.40141 | gap 1, opp_overlap 1954453, overlap 1954461 ATCACACATATCCAA GAGGAAGCT-CTG ATT CAGGAGTTTCCTC TTGATTCCGATTTTA TERM 2707 1954729 - 1954742 + G 79 -2.3 -5.48825 | ATTTTCTCTTAAAGG GGTTC CGCA GATCC TTTTTTTCAATGATG Dhaf_1825 1954511 - 1954837 + | Thioredoxin domain protein TERM 2708 1954929 - 1954900 - T 86 -7.9 -4.67038 | gap 1, opp_overlap 1954900 1954903 TCTGGAAAATCAAAA GAAGCCC-CTAGCA TCC TGCTGGCAGGCTTC TTTGTCGTGCATCTG TERM 2709 1954900 - 1954929 + T 74 -7.9 -3.98661 | gap 1, opp_overlap 1954900, overlap 1954903 TCTGGAAAATCAAAA GAAGCC-CCTAGCA TCC TGCTGGCAGGCTTC TTTGTCGTGCATCTG Dhaf_1826 1955938 - 1954955 - | transcriptional regulator, LysR family Dhaf_1827 1956257 - 1956898 + | cobalamin B12-binding domain protein Dhaf_1828 1956996 - 1957991 + | hypothetical protein TERM 2710 1958128 - 1958105 - T 73 -5.2 -4.7254 | overlap 1958106 1958107 ATGTCTGACGAAAAA GGGGCTGTGT GAAA ACACAGCCGA AAAAACGCTTGAAAT TERM 2711 1958127 - 1958106 - T 73 -8.7 -3.43042 | overlap 1958105 1958107 TGTCTGACGAAAAAG GGGCTGTGT GAAA ACACAGCCG AAAAAACGCTTGAAA TERM 2712 1958126 - 1958107 - T 83 -12.2 -2.65504 | overlap 1958106 1958105 GTCTGACGAAAAAGG GGCTGTGT GAAA ACACAGCC GAAAAAACGCTTGAA TERM 2713 1958134 - 1958159 + T 100 -14.9 -5.03145 | opp_overlap 1958134 ACACAGCCGAAAAAA CGCTTGAAATC AAGA GATTTCAAGCG TTTTTTAACGAATTA TERM 2714 1958159 - 1958134 - T 100 -14.9 -5.08169 | opp_overlap 1958134 ACACAGCCGAAAAAA CGCTTGAAATC AAGA GATTTCAAGCG TTTTTTAACGAATTA Dhaf_1830 1959239 - 1958751 - | hypothetical protein TERM 2715 1959182 - 1959161 - G 77 -10.3 -3.6053 | overlap 1959157 CCTGGGAGAAACTAA GATTCGAAT CTGG ATTCGAATC TGGCAAGCTCACGCC TERM 2716 1959424 - 1959394 - R 84 -2.8 -5.63517 | gap 2, opp_overlap 1959394 CCTTGAAACAAAAAA GCTGAAAACTTTAC TTGGG GTAA-G-TTTCAGC TTTTTTATTGTTGGA TERM 2717 1959394 - 1959424 + r 89 -3.5 -5.64873 | gap 2, opp_overlap 1959394 CCTTGAAACAAAAAA GCTGAAAACTTTACT TGG GGTA-AG-TTTCAGC TTTTTTATTGTTGGA Dhaf_1831 1960400 - 1959504 - | transcriptional regulator, LysR family Dhaf_1832 1960541 - 1961587 + | amidohydrolase 2 Dhaf_1833 1961620 - 1962765 + | hypothetical protein Dhaf_1834 1962781 - 1962927 + | hypothetical protein TERM 2718 1963401 - 1963388 - g 73 -3.7 -4.88163 | opp_overlap 1963398 GTAAGAGAAAATAAA CCGGC CATT GTCGG CATGAGCGGAGTTTT Dhaf_1835 1962965 - 1963603 + | cobalamin B12-binding domain protein TERM 2719 1964605 - 1964588 - g 74 -9.9 -3.54741 | overlap 1964597 GATGATTTGCGCAAA GCCAAGA GAGC TCTTGGC AAAACCATGTGCATT Dhaf_1836 1963655 - 1964821 + | hypothetical protein Dhaf_1837 1964862 - 1965017 + | hypothetical protein Dhaf_1838 1965081 - 1965893 + | dihydropteroate synthase DHPS Dhaf_1839 1966332 - 1966586 + | hypothetical protein TERM 2720 1968238 - 1968254 + G 77 -6.5 -4.63218 | overlap 1968226 CGACCGGGAGATGAT TCGCCGG GTA TTGGCGA TTTTATTGGAAAACG TERM 2721 1968469 - 1968436 - g 75 -6.1 -4.50976 | gap 1, overlap 1968440 GCGCACAGGAGAAAA TGGAGGCTATGGAC TGGGTTT GTCCATAGCC-CAA ACCATCATCCGCCGG TERM 2722 1968466 - 1968440 - g 80 -12.4 -2.81936 | overlap 1968436 ACAGGAGAAAATGGA GGCTATGGAC TGGGTTT GTCCATAGCC CAAACCATCATCCGC Dhaf_1841 1967270 - 1968562 + | histidine kinase Dhaf_1842 1970156 - 1968828 - | MATE efflux family protein TERM 2723 1970225 - 1970184 - R 95 -3.2 -6.20267 | gap 1, opp_overlap 1970203 1970205 TTAAAAACAAAAAAA CCTGAACGGCATTCC TCATTTCCTGGCT GGAATGC-ATTCAGG TGTGCTCAGTTTTGC TERM 2724 1970414 - 1970377 - R 100 -14.2 -3.12327 | opp_overlap 1970371, overlap 1970382 TCGTTATACTCAACA GGAAACACCTGCGGCA GAATTA TACCGCAGGCGTATCC GCTGATGGTTTACTT TERM 2725 1970409 - 1970382 - R 100 -11.3 -3.94184 | opp_overlap 1970371, overlap 1970377 ATACTCAACAGGAAA CACCTGCGGCA GAATTA TACCGCAGGCG TATCCGCTGATGGTT Dhaf_1843 1970648 - 1970424 - | hypothetical protein Dhaf_1844 1970765 - 1971217 + | putative transcriptional regulator, PucR family Dhaf_1845 1971359 - 1972195 + | nitroreductase Dhaf_1846 1972281 - 1972541 + | putative transcriptional regulator, PucR family TERM 2726 1972894 - 1972918 + G 100 -15.9 -2.79302 | opp_overlap 1972889 1972886 ATCATAACACCATGG TCCACCTTATC TGG GATAAGGTGGA TGTGCTGAAGGTCAT Dhaf_1847 1972890 - 1973285 + | aminomethyltransferase, putative TERM 2727 1973301 - 1973357 + F 100 -14.8 -2.60496 | gap 1, opp_overlap 1973302 1973315, overlap 1973315 TCTGTAAATAAAAGC ATGTTTAG-AGGAAAGGTCGCTCTTTT AAAT AAAAGGGCGGCCTTTCCTGCTGAATAA CTGTTTAAAGAGCCG TERM 2728 1973356 - 1973302 - f 74 -9.5 -3.32684 | gap 1, opp_overlap 1973301 1973315, overlap 1973315 CTGTAAATAAAAGCA TGTTTAG-AGGAAAGGTCGCTCTTTT AAAT AAAAGGGCGGCCTTTCCTGCTGAATA ACTGTTTAAAGAGCC TERM 2729 1973342 - 1973315 - f 75 -8.4 -3.83502 | opp_overlap 1973315 1973301, overlap 1973302 CATGTTTAGAGGAAA GGTCGCTCTTTT AAAT AAAAGGGCGGCC TTTCCTGCTGAATAA TERM 2730 1973315 - 1973342 + F 100 -12.8 -3.79747 | opp_overlap 1973302 1973315, overlap 1973301 CATGTTTAGAGGAAA GGTCGCTCTTTT AAAT AAAAGGGCGGCC TTTCCTGCTGAATAA TERM 2731 1973626 - 1973643 + G 73 -5.6 -4.57341 | GATCTATGATATGCC GGCATT GCTTGA AATGCC TTTTTACAGCAAGTT Dhaf_1848 1973534 - 1973668 + | hypothetical protein Dhaf_1849 1973809 - 1975611 + | Ig domain protein group 2 domain protein TERM 2732 1976006 - 1975981 - f 82 -6.9 -4.79352 | opp_overlap 1975981 1975984 1975985, overlap 1975985 GCACCGACAAGAAAA TAATGAACGCA AATT TGCGCTCGTTA TCGGTTTAGTCGATA Dhaf_1850 1976141 - 1976473 + | glyoxalase/bleomycin resistance protein/dioxygenase Dhaf_1851 1977236 - 1976505 - | hypothetical protein TERM 2733 1976972 - 1976951 - G 77 -10.3 -3.6053 | CCTGGGAGAAATTAA GATTCGAAT CTGG ATTCGAATC TGGCAAGCTCACGCC TERM 2734 1977437 - 1977453 + G 76 -2.1 -5.24531 | CCGGCATGAAGCCCA GCGAAGC AAT GGTACGC TTTTTTATCACCGGT Dhaf_1852 1977427 - 1977585 + | hypothetical protein Dhaf_1853 1977700 - 1978422 + | transcriptional regulator, Crp/Fnr family TERM 2735 1978478 - 1978507 + T 100 -3.7 -6.37666 | gap 1, opp_overlap 1978478 CTACTTATTATAAAA GAAACTATCGGACT AAC AATTCGA-AGTTTC TTTTTTTTATTTTAT Dhaf_1854 1980333 - 1978735 - | transposase IS1634 family protein TERM 2736 1979592 - 1979606 + g 74 -10 -3.44848 | opp_overlap 1979591 1979590 1979594, overlap 1979590 CCGCTTCAATAAAGG CATCGG TAT CCGATG TGTTTCCTGGGAACA TERM 2737 1981458 - 1981438 - g 75 -5.3 -4.77896 | CAATGAAGGGAAAAA GCTGGGG GTTCCTA CCCCGGC GGTTGAGACCATTGC Dhaf_1855 1980581 - 1981531 + | 2-dehydropantoate 2-reductase Dhaf_1856 1981576 - 1982883 + | major facilitator superfamily MFS_1 TERM 2738 1983004 - 1982973 - f 81 -5.3 -5.24416 | gap 1 CAAGGACAATAAAAA CGGATGAA-GGA GCAAATCAT TCCATTCATCCG CCGGCAACAAAATAA TERM 2739 1983973 - 1983938 - g 71 -3.8 -4.72272 | gap 1, opp_overlap 1983965 GCCGCCCAGGAAAAA CTGGCGGGCCTGCTCCA GGT CGGTGCGGATCC-CCAG GTGATCTTCGGTCAA Dhaf_1857 1983053 - 1984243 + | Xaa-Pro aminopeptidase-like protein TERM 2740 1984708 - 1984738 + G 71 -10.6 -2.78463 | opp_overlap 1984713 1984734, overlap 1984713 CAGCATTCCCGCATA TCGAATTCGTCG ACATCAC CGATGAATTCGA TATGATCAAAGGGCT Dhaf_1858 1984266 - 1985450 + | peptidase M24 TERM 2741 1985465 - 1985492 + F 100 -10.7 -4.25104 | opp_overlap 1985465 AACTATCAGTATGAA TTGAGTCTTCC TTTGCC GGAGGACTCAA TTTTAATGGGGCCAG Dhaf_1859 1985511 - 1986173 + | transcriptional regulator, Crp/Fnr family TERM 2742 1986291 - 1986348 + F 100 -40.5 -3.64703 | opp_overlap 1986286 1986297 ATTGCGAAAGTACGG CCACAAGAGGGCTCGTAAGATTCGAAA CCGG TTTCGAATCTTACGAGCCCTCTTGTGG TTTACCTCCGACCCA TERM 2743 1986342 - 1986297 - f 100 -30.9 -3.32536 | opp_overlap 1986291, overlap 1986286 AAAGTACGGCCACAA GAGGGCTCGTAAGATTCGAAA CCGG TTTCGAATCTTACGAGCCCTC TTGTGGTTTACCTCC TERM 2744 1986493 - 1986478 - f 77 -4.8 -4.97824 | AAAAGCCAAAGAAAA CTATAA TCTT TTATAG AGTTAGGTGAAGCTA Dhaf_1860 1986543 - 1988177 + | extracellular solute-binding protein family 5 TERM 2745 1988201 - 1988230 + F 100 -11.5 -4.18018 | gap 1, opp_overlap 1988201 GAAGGATCGGTAAAA CGCGGCCATACC CGGTTGT GGT-TGGCCGCG TTTTGCATGAAAAGG TERM 2746 1988230 - 1988201 - f 100 -11.5 -4.12902 | gap 1, opp_overlap 1988201 GAAGGATCGGTAAAA CGCGGCCATACC CGGTTGT GGT-TGGCCGCG TTTTGCATGAAAAGG TERM 2747 1989022 - 1989072 + G 85 -6 -5.14563 | overlap 1989023 CGGCGGTGACTTTGC AGTTTGCGGCCATCAGTGAGCTGT TCG GCGGCTCGGTGCTGGCAGAAAACG TTTTTTCCTACACCG TERM 2748 1989023 - 1989071 + G 76 -9.5 -3.68256 | overlap 1989022 GGCGGTGACTTTGCA GTTTGCGGCCATCAGTGAGCTGT TCG GCGGCTCGGTGCTGGCAGAAAAC GTTTTTTCCTACACC Dhaf_1861 1988262 - 1989251 + | binding-protein-dependent transport systems inner membrane component TERM 2749 1989777 - 1989795 + G 77 -8.8 -4.1822 | overlap 1989779 CCAGGCATCCCGCAG GATGGGGC GCA GCCCCATG TTTATTGCCGTGGGG TERM 2750 1989779 - 1989793 + G 85 -11.4 -3.69068 | overlap 1989777 AGGCATCCCGCAGGA TGGGGC GCA GCCCCA TGTTTATTGCCGTGG TERM 2751 1989802 - 1989829 + G 70 -9.9 -3.21354 | gap 1, overlap 1989801 1989804 1989806 AGCCCCATGTTTATT GC-CGTGGGGCA TATCC TGCCCCATGTGC TTCCTCAGTATATCG TERM 2752 1989804 - 1989826 + G 74 -11.3 -2.79574 | overlap 1989801 1989802 1989806 CCCCATGTTTATTGC CGTGGGGCA TATCC TGCCCCATG TGCTTCCTCAGTATA TERM 2753 1989806 - 1989824 + G 72 -10.3 -2.94199 | overlap 1989801 1989804 1989802 CCATGTTTATTGCCG TGGGGCA TATCC TGCCCCA TGTGCTTCCTCAGTA Dhaf_1862 1989241 - 1990092 + | binding-protein-dependent transport systems inner membrane component TERM 2754 1990910 - 1990933 + G 74 -11 -2.8372 | gap 1, overlap 1990909 CCTCCAGCCCTATGC GGGCAGCCTGC CCA GCGGG-TGCCC CTTTGCTCCCCGCTG Dhaf_1863 1990101 - 1991033 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 2755 1991137 - 1991113 - g 71 -8.4 -3.64915 | opp_overlap 1991111 GTGGATAAAGGAGAA CGGGTGGGCC TTGTG GGCCCCTCCG GCTATGGTAAAAGCA Dhaf_1864 1991023 - 1991640 + | ABC transporter related Dhaf_1865 1992941 - 1991637 - | histidine kinase TERM 2756 1991749 - 1991770 + g 100 -17.3 -4.38927 | CTGTTCAGGCCGATT CCGGCGCTG GCAA CAGCGCCGG TTTCTTCTGTGCGGA TERM 2757 1992158 - 1992170 + g 78 -5.5 -4.86621 | overlap 1992159 GCTCCTGGACTACTT TGCTG GGA CAGCG TTTTTGATTGACAAT Dhaf_1866 1993638 - 1992934 - | two component transcriptional regulator, winged helix family TERM 2758 1992985 - 1993001 + g 73 -2.2 -5.00884 | overlap 1992987 GATATATTTCGGGTG TTGAGG ATCTG CCTCTA TTTTTTGCCGCAGGT TERM 2759 1993957 - 1993986 + r 100 -16.5 -3.01745 | opp_overlap 1993957, overlap 1993953 TAAGTATTACAATAA GGCTGCCGACC AATTACCC GGTCGGCAGCC TATGCTTGTTCGCCC TERM 2760 1993986 - 1993957 - R 100 -17.9 -3.86935 | opp_overlap 1993957 1993953 TAAGTATTACAATAA GGCTGCCGACCAA TTAC CCGGTCGGCAGCC TATGCTTGTTCGCCC TERM 2761 1993997 - 1994011 + r 80 -11.4 -2.73221 | overlap 1993995 CAGCCTATGCTTGTT CGCCCA GCA TGGGCG TAATCTAATTATTCA Dhaf_1867 1996113 - 1994020 - | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 2762 1994178 - 1994194 + g 70 -2.2 -4.87133 | CCACATCTCTGAGTT CGGCCT CGTTC AGGTTG TTTTCTTTGGAGAGT TERM 2763 1995608 - 1995624 + g 76 -2.2 -5.24531 | GGAAAGTTTTCCGGA CCTAAC AAAGA GATAGG TTTTTTGTGACGAAT Dhaf_1868 1996426 - 1997811 + | sodium/sulphate symporter Dhaf_1869 1998139 - 2000712 + | molybdopterin oxidoreductase Dhaf_1870 2000712 - 2001527 + | pyrogallol hydroxytransferase Dhaf_1871 2001555 - 2001710 + | hypothetical protein TERM 2764 2001778 - 2001736 - f 100 -13.1 -4.07975 | gap 1, opp_overlap 2001740 2001742 2001747, overlap 2001740 TAAGTTAATTATAAA TAAACAGAGCAAG-CATTTC TTAG GAAATGCCTTGCTCTATTCA TACTCATACTTTTTT TERM 2765 2001774 - 2001740 - f 100 -11.7 -4.62622 | gap 1, opp_overlap 2001740 2001742 2001747, overlap 2001736 TTAATTATAAATAAA CAGAGCAAG-CATTTC TTAG GAAATGCCTTGCTCTA TTCATACTCATACTT TERM 2766 2001740 - 2001774 + F 74 -9.5 -3.2396 | gap 1, opp_overlap 2001740 2001736, overlap 2001742 2001747 TTAATTATAAATAAA CAGAGCAAG-CATTTC TTAG GAAATGCCTTGCTCTA TTCATACTCATACTT TERM 2767 2001742 - 2001772 + F 86 -12.1 -3.18023 | gap 1, opp_overlap 2001740 2001736, overlap 2001740 2001747 AATTATAAATAAACA GAGCAAG-CATTTC TTAG GAAATGCCTTGCTC TATTCATACTCATAC Dhaf_1872 2001881 - 2003266 + | sodium/sulphate symporter TERM 2768 2003377 - 2003365 - f 71 -9.1 -3.28712 | overlap 2003374 2003375 GCCTTGGTTCGAGAA CGGCT GAA AGCCG CCGTAAGGCGAATCC Dhaf_1873 2003453 - 2004625 + | protein of unknown function DUF224 cysteine-rich region domain protein TERM 2769 2005589 - 2005554 - g 91 -13.3 -3.53012 | opp_overlap 2005552 2005579 2005585 CGGCCGGCCGGTAAA TTTGCCGGCCAGGTC AGAAAA GCCCTGGCCGGGAAA GGCTATTCCTTGGTT TERM 2770 2005797 - 2005787 - g 71 -4.6 -4.58644 | AAGCAAGAACCAAAA CCAG ATC CCGG TCCAGCATGTTTTAA Dhaf_1874 2004789 - 2005922 + | protein of unknown function DUF224 cysteine-rich region domain protein TERM 2771 2006446 - 2006459 + G 73 -8.1 -3.9941 | ACCTCAGGGTTCAAT TCGGC CTGC GCCGA TTTAATTGTGCAGAC TERM 2772 2006577 - 2006597 + G 74 -9 -3.74251 | CATCCCCACAGCCTT GCTTGAGC CTATA GCTCAGGC TTTGCTGAAGCTATC TERM 2773 2006821 - 2006852 + G 82 -11.6 -3.41125 | opp_overlap 2006827, overlap 2006824 GACCGGAAAGTCGCT CAAGCACTGCATCC CGAT GCCTGCAGTGCTTG TTATACCTGTGTGGG Dhaf_1875 2005948 - 2006907 + | protein of unknown function DUF169 TERM 2774 2006962 - 2006981 + G 74 -6.4 -4.41494 | TTAATGGGAACCACT GCCGGA CTCGGTGT TCCGGC TTTTCATTGCAACTG Dhaf_1876 2006929 - 2007714 + | beta-lactamase domain protein TERM 2775 2008318 - 2008297 - g 73 -2.1 -5.05782 | overlap 2008299 ATGGAGTTGAAAAAA CCGATCCAA ATAT TGGGCCCGG AACACTACTGCGTGG Dhaf_1877 2007823 - 2009907 + | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 2776 2009938 - 2009919 - f 70 -7.8 -3.7347 | opp_overlap 2009919 CTGAAGACCCAAGAA CCCTTTGC TGAG GCAGAGGG TTTTTCATATTGAAA TERM 2777 2009919 - 2009938 + F 100 -10 -4.87626 | opp_overlap 2009919 CTGAAGACCCAAGAA CCCTTTGC TGAG GCAGAGGG TTTTTCATATTGAAA Dhaf_1878 2010106 - 2011005 + | Inosine/uridine-preferring nucleoside hydrolase Dhaf_1879 2011007 - 2011273 + | hypothetical protein TERM 2778 2011319 - 2011348 + F 71 -8.5 -3.56244 | overlap 2011319 AAGAAATAGGTTTAA CCCCCTGCTCAAA CTAA TATGGGCAAGGGG GTTTTGTTGTTATAG TERM 2779 2011319 - 2011349 + F 100 -8.3 -4.9645 | gap 1, overlap 2011319 AAGAAATAGGTTTAA CCCCC-TGCTCAAA CTAA TATGGGCAAGGGGG TTTTGTTGTTATAGT TERM 2780 2013309 - 2013289 - g 82 -11.9 -3.28785 | opp_overlap 2013299, overlap 2013284 GGGTAAAAGACTCAA TCCCAAAGC CTG GCCTTGGGA CAATGTTTCCGATTT TERM 2781 2013970 - 2013948 - g 78 -12.2 -2.74701 | opp_overlap 2013936, overlap 2013945 ATACCTTTAAGAGTA TTCTCTGTAA GGT TTACAGAGAA GCTTAAGATGAACTG Dhaf_1880 2011742 - 2013976 + | Formate dehydrogenase TERM 2782 2014095 - 2014079 - g 73 -5.1 -4.56775 | overlap 2014088 2014090 AGTTGCCTGTAAAAA CGAAAAG AAT CTTCCCG TCGGAAAATGGGGGA Dhaf_1881 2014005 - 2014340 + | putative oxidoreductase iron-sulfur subunit Dhaf_1882 2014396 - 2014617 + | hypothetical protein Dhaf_1883 2014800 - 2016065 + | major facilitator superfamily MFS_1 Dhaf_1884 2016110 - 2016286 + | hypothetical protein TERM 2783 2016374 - 2016338 - f 77 -8.2 -3.91897 | gap 2, opp_overlap 2016338 TCCTTGATTCACAAA GGTAGTATAGAGTACGGT GTA ACCG--CTCTATACTGCC TTCTGAAGCTGGGGT TERM 2784 2016338 - 2016374 + F 78 -10.4 -3.31263 | gap 2, opp_overlap 2016338 TCCTTGATTCACAAA GGTAGTATAGAGTACGGT GTA ACCG--CTCTATACTGCC TTCTGAAGCTGGGGT Dhaf_1885 2016527 - 2017891 + | major facilitator superfamily MFS_1 TERM 2785 2017948 - 2017929 - f 86 -12.2 -3.14211 | opp_overlap 2017929 AGCTGCTTCCACTAA CTGCTTCC AGCC GGAAGCAG TTTTCACTTCCAGGG TERM 2786 2017929 - 2017948 + F 100 -12.2 -4.27316 | opp_overlap 2017929 AGCTGCTTCCACTAA CTGCTTCC AGCC GGAAGCAG TTTTCACTTCCAGGG Dhaf_1886 2018146 - 2020389 + | molybdopterin oxidoreductase Dhaf_1887 2020391 - 2020939 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 2787 2020976 - 2020966 - g 75 -5.4 -4.72386 | GAAATGAGCCAAAAA CATG AAA CATG GGGCTGGATGTTAGC TERM 2788 2021661 - 2021676 + G 75 -10.4 -3.31691 | overlap 2021669 2021671 CGGGTTTATGTTCCT GGGCAC GGTG GTGCCC TTGGTACTGTTTCTC Dhaf_1888 2020954 - 2021877 + | Polysulphide reductase NrfD TERM 2789 2021892 - 2021923 + F 100 -21.8 -2.70932 | opp_overlap 2021880 AAGGGCGGTTGTACT TGTTTCCGCAGCAG CTGG CTGCTGCGGAAACA TCGTTCCCAGGCAGA TERM 2790 2023201 - 2023188 - g 83 -3.8 -5.47821 | ATGGACTTAAAAAAA CTGC GGGAAT GCAG CATGATCGTTGCCGG Dhaf_1889 2022000 - 2023325 + | Radical SAM domain protein TERM 2791 2023357 - 2023347 - g 83 -6.8 -4.9138 | ATGAGTGAAAGAAAA GTCG TTC CGAC CAACTGCCGCTTCTG Dhaf_1890 2023332 - 2025512 + | molybdopterin oxidoreductase Dhaf_1891 2025587 - 2026066 + | GCN5-related N-acetyltransferase Dhaf_1892 2026063 - 2026908 + | hypothetical protein Dhaf_1893 2026945 - 2027970 + | NADH:flavin oxidoreductase/NADH oxidase Dhaf_1894 2027990 - 2029288 + | trigger factor TERM 2792 2029428 - 2029379 - T 100 -12.9 -3.99592 | opp_overlap 2029383, overlap 2029382 AGGCAGGAGGAGAAA CCAGGGGCCGTTGCTTACGAACT AACC AGTTCGTGAACAACGGCCCTTTT TTGCTTGTTTATGGG TERM 2793 2029425 - 2029382 - T 100 -19 -3.04836 | opp_overlap 2029383, overlap 2029379 CAGGAGGAGAAACCA GGGGCCGTTGCTTACGAACT AACC AGTTCGTGAACAACGGCCCT TTTTTGCTTGTTTAT TERM 2794 2029383 - 2029424 + T 100 -22.5 -5.4148 | opp_overlap 2029382 2029379 AGGAGGAGAAACCAG GGGCCGTTGCTTACGAACT AACC AGTTCGTGAACAACGGCCC TTTTTTGCTTGTTTA Dhaf_1895 2030141 - 2029512 - | cobalamin B12-binding domain protein Dhaf_1896 2030978 - 2030175 - | dihydropteroate synthase DHPS Dhaf_1897 2032118 - 2031012 - | hypothetical protein Dhaf_1898 2033546 - 2032200 - | major facilitator superfamily MFS_1 TERM 2795 2032538 - 2032527 - G 73 -3.6 -5.00616 | CGGTGTTGGAAAAAA GCCG CATA CGAC AAAGGTCATCCCATT TERM 2796 2032992 - 2032968 - G 75 -3.5 -5.03713 | overlap 2032984 AACAATGAAACAAAA CGGCAATAATA AAA TACTGGTGCCG CCCAGGACGAAAATA Dhaf_1899 2034988 - 2033762 - | major facilitator superfamily MFS_1 TERM 2797 2034939 - 2034955 + g 76 -2.3 -5.27938 | overlap 2034939 ATAAATAAGAGAATC GGTAA CAATACC TTACC TTTTTCTTTGAAGAT TERM 2798 2035395 - 2035436 + H 86 -8.1 -4.67048 | gap 1, opp_overlap 2035402 2035405, overlap 2035402 2035405 TCTTCAAACATTATG GT-CAAAATGACGCGAGCCA AAA TGGCACGTGTTAATTTGCAC TTTGTTTTCCGGTCC TERM 2799 2035402 - 2035428 + H 70 -9.4 -2.858 | opp_overlap 2035402 2035405, overlap 2035395 2035405 ACATTATGGTCAAAA TGACGCGAGCCA AAA TGGCACGTGTTA ATTTGCACTTTGTTT TERM 2800 2035405 - 2035425 + H 73 -8.9 -3.5556 | opp_overlap 2035405 2035402, overlap 2035402 2035395 TTATGGTCAAAATGA CGCGAGCCA AAA TGGCACGTG TTAATTTGCACTTTG TERM 2801 2035827 - 2035858 + H 100 -14.6 -5.38951 | opp_overlap 2035827 AATTAAAACTTGAAA GAGGAAGCAATGCG TTTA TGTATTGCTTCCTC TTTTTTCTATGCCTT TERM 2802 2035858 - 2035827 - H 95 -11.7 -3.78087 | opp_overlap 2035827 AATTAAAACTTGAAA GAGGAAGCAATGC GTTTAT GTATTGCTTCCTC TTTTTTCTATGCCTT TERM 2803 2036360 - 2036340 - g 70 -2.5 -4.84359 | TGATCCTTATAAAAA TGCCGTTAA TCA TTATCTGCA TCGTGAACAGTACGA TERM 2804 2036647 - 2036626 - g 79 -3.6 -5.26316 | gap 1 TTACGGCACAAAAAA CCGGTGCAG CTGTT CGGC-CCGG AACACTACCTTTGGG Dhaf_1900 2036128 - 2038281 + | sigma54 specific transcriptional regulator, Fis family TERM 2805 2038343 - 2038318 - f 100 -20.5 -4.15006 | opp_overlap 2038318 ATATTTATCTGAAAA GGGGCCGTGAC TACA GTCACGGCCCC TTTTGGCATGGTTCT TERM 2806 2038318 - 2038343 + F 100 -20.5 -4.17425 | opp_overlap 2038318 ATATTTATCTGAAAA GGGGCCGTGAC TACA GTCACGGCCCC TTTTGGCATGGTTCT Dhaf_1901 2038432 - 2038692 + | hypothetical protein TERM 2807 2039267 - 2039280 + G 75 -5.9 -4.65838 | TATTTTTCATTCCTG GGGTG CCAG CGCCC TTTTTCACGTCTCTG Dhaf_1902 2038761 - 2039975 + | major facilitator superfamily MFS_1 TERM 2808 2040022 - 2040076 + T 100 -22 -4.53857 | gap 1, opp_overlap 2040030 2040034, overlap 2040022 2040025 2040034 AAAACAGAAAACCCG TGCCGAAAGAAAGAGACGCAACAAA ACAAGG TTTGTTGCGTCTCTTTCTTTCG-TA TTATTTATTTTTGCT TERM 2809 2040022 - 2040079 + T 100 -12.5 -4.95618 | gap 2, opp_overlap 2040030 2040034, overlap 2040022 2040025 2040034 AAAACAGAAAACCCG T-G-CCGAAAGAAAGAGACGCAACAAA ACAAGG TTTGTTGCGTCTCTTTCTTTCGTATTA TTTATTTTTGCTGTT TERM 2810 2040025 - 2040074 + T 100 -28.4 -3.84447 | opp_overlap 2040030 2040034, overlap 2040022 2040022 2040034 ACAGAAAACCCGTGC CGAAAGAAAGAGACGCAACAAA ACAAGG TTTGTTGCGTCTCTTTCTTTCG TATTATTTATTTTTG TERM 2811 2040069 - 2040030 - T 100 -21.1 -3.5394 | opp_overlap 2040025 2040022 2040022 2040034, overlap 2040034 AAACCCGTGCCGAAA GAAAGAGACGCAACAAA ACAAGG TTTGTTGCGTCTCTTTC TTTCGTATTATTTAT TERM 2812 2040065 - 2040034 - T 100 -16.1 -4.41348 | opp_overlap 2040025 2040022 2040022 2040034, overlap 2040030 CCGTGCCGAAAGAAA GAGACGCAACAAA ACAAGG TTTGTTGCGTCTC TTTCTTTCGTATTAT TERM 2813 2040034 - 2040065 + T 100 -16.1 -4.57787 | opp_overlap 2040034 2040030, overlap 2040025 2040022 2040022 CCGTGCCGAAAGAAA GAGACGCAACAAA ACAAGG TTTGTTGCGTCTC TTTCTTTCGTATTAT Dhaf_1903 2040406 - 2040122 - | hypothetical protein TERM 2814 2040305 - 2040291 - G 75 -3.6 -5.00884 | overlap 2040293 ACTGCTTTGAAAAAA TCTTCA TAT TGAAAA GTAAAGGCTTTCGTT Dhaf_1904 2041117 - 2043378 + | molydopterin dinucleotide-binding region Dhaf_1905 2043425 - 2043760 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 2815 2043838 - 2043877 + F 76 -10.8 -2.52291 | overlap 2043837 2043835 ATCCCGTCGGTTGCA AGGCTATCTCCTAATGAT ATGT ATCTTTTGGAGATAGCCC CTCTTCATCTGAATT TERM 2816 2044906 - 2044878 - g 81 -11 -3.67175 | overlap 2044897 ATTGCCGAAAACCAA GCGGCCGCCACT GAAGA AATAACGGCCGC AGTTACGGATGTTGG Dhaf_1906 2044116 - 2044967 + | methyl-accepting chemotaxis sensory transducer TERM 2817 2046848 - 2046834 - g 83 -2.1 -5.59879 | gap 1, overlap 2046846 TATAAATACAAAAAA GGC-CT GTTA AGAGCC GATGGCCAGCCCGGA TERM 2818 2047134 - 2047124 - g 71 -8.2 -3.6422 | overlap 2047122 TACCGCCGCAAAATA CGGC CTG GCCG AAGGTGACTGGGTAT Dhaf_1907 2045073 - 2047457 + | molybdopterin oxidoreductase Dhaf_1908 2047441 - 2047788 + | putative oxidoreductase iron-sulfur subunit TERM 2819 2047892 - 2047869 - f 83 -9.6 -3.93057 | opp_overlap 2047869 CCCAAAAGTATCAAA CACCCTCATT ATGG ATTGAGGGTG TTTTTTGTGCGCCAG TERM 2820 2047869 - 2047892 + F 100 -9.6 -5.24129 | opp_overlap 2047869 CCCAAAAGTATCAAA CACCCTCATT ATGG ATTGAGGGTG TTTTTTGTGCGCCAG TERM 2821 2049319 - 2049298 - g 71 -6.5 -4.15748 | GCAGGGGAAAAAAGA TGTGGCAGC GGTG GCCGCCAAA AAATTAGCTGCGGCG Dhaf_1910 2048330 - 2049412 + | ATPase associated with various cellular activities AAA_3 Dhaf_1911 2049409 - 2050071 + | hypothetical protein TERM 2822 2050946 - 2050925 - g 77 -6.5 -4.63184 | AATCGACTGGAAAAA GCAGCTTGC CTCG GCAATCCGC CGCACTGTAGCGGAT Dhaf_1912 2050068 - 2051444 + | hypothetical protein TERM 2823 2051543 - 2051500 - f 100 -13.9 -4.57516 | ATACCTAAAGGAAAA GGGCCTGATGCAAAACGTT GCTCAT AACGTAGTGCGTCAGGCCC TGTCGGCATCTGCCG Dhaf_1913 2051804 - 2052127 + | hypothetical protein TERM 2824 2052158 - 2052136 - f 72 -7.6 -3.89822 | GAGTTAGTGGACAAA CTCCTGGGCA GGA TTCCCCGGAG CCGGTGTACAGTTTT Dhaf_1914 2052234 - 2053208 + | Methyltransferase type 11 Dhaf_1915 2053287 - 2054132 + | major intrinsic protein Dhaf_1916 2054255 - 2055346 + | cobalamin synthesis protein P47K TERM 2825 2055492 - 2055479 - g 73 -8.1 -4.0825 | TCGTGAAGCAAACAA GCCTG GTTC CAGGC AGAATTCAGGTGTGA Dhaf_1917 2055390 - 2055551 + | hypothetical protein Dhaf_1918 2055652 - 2056674 + | binding-protein-dependent transport systems inner membrane component Dhaf_1919 2056668 - 2057465 + | ABC transporter related TERM 2826 2058411 - 2058392 - g 73 -7.9 -4.04474 | ACAGCTTCAGAGAAA TCTGGCA CCAGAT TGCCAGA GCCGGAGCCTTGGAA Dhaf_1920 2057467 - 2058501 + | NMT1/THI5 like domain protein Dhaf_1921 2058525 - 2058959 + | hypothetical protein TERM 2827 2059053 - 2059084 + G 84 -13 -3.11023 | gap 1, opp_overlap 2059034, overlap 2059053 2059069 GGGTGCAGTCCCTTG CGACCATGCTGTCGG TGA CCGTCAGCGTGG-CG GTTCTTTTGGCCCTT TERM 2828 2059053 - 2059085 + G 83 -9.7 -4.2018 | opp_overlap 2059034, overlap 2059053 2059069 GGGTGCAGTCCCTTG CGACCATGCTGTCGG TGA CCGTCAGCGTGGCGG TTCTTTTGGCCCTTT Dhaf_1922 2059001 - 2060203 + | protein of unknown function DUF214 Dhaf_1923 2060226 - 2060870 + | ABC transporter related TERM 2829 2060940 - 2060928 - f 78 -9.1 -3.83205 | AGTCTTTATATGAAA CGCAC AAC GTGCG GACGAGAGGAGAAAT Dhaf_1924 2060961 - 2061293 + | alkylhydroperoxidase like protein, AhpD family TERM 2830 2061647 - 2061633 - g 81 -12.8 -2.62263 | opp_overlap 2061631 2061625 AGGCCTTGGATATCA CCGGCG GCG CGCCGG AATTAAATCCTAATT TERM 2831 2061703 - 2061692 - g 73 -2.2 -5.17576 | overlap 2061697 CAGGAAGCGAAAAAA CTGA ACCG CCAG GTGATGACGAGAACC TERM 2832 2061890 - 2061880 - g 73 -5.4 -4.60924 | CAAACTGCTGAAAAA GTTC AAT GAAC TGGGCTATGGCCGGG TERM 2833 2062055 - 2062066 + G 83 -7.2 -4.82855 | GCCATCGGCAATTTC CCGG TGGG CCGG TTTTTAACTTTCCTG Dhaf_1925 2061344 - 2062360 + | Radical SAM domain protein Dhaf_1926 2062389 - 2063393 + | Radical SAM domain protein TERM 2834 2063832 - 2063845 + G 71 -4.5 -4.56775 | gap 1, overlap 2063829 2063837 2063842 TCAAATTACGGTCCG GCC-GC GGC GCTGGC TTTTTCGGCAGCCAT TERM 2835 2064255 - 2064268 + G 76 -2.3 -5.19916 | overlap 2064256 AAAGCTTTTATTGCC TCCGG CGTG CTGGG TTTTTTCGCTATTTT TERM 2836 2064887 - 2064865 - g 72 -6.2 -4.44046 | GTGAGGCGAAAGAAA GTGGACCGAG TGG CTCAGCACAC GAAGCGATTGCAGCG Dhaf_1927 2063481 - 2064929 + | hypothetical protein Dhaf_1928 2064933 - 2065877 + | hypothetical protein Dhaf_1929 2066836 - 2066081 - | prevent-host-death family protein TERM 2837 2067013 - 2067071 + H 100 -21.4 -3.30979 | gap 1, opp_overlap 2067021 2067022, overlap 2067014 2067022 CAGTGATAATGAGCA GGGACAAAGGCAAAGCTGCCTCGACAC ATAAAA GT-TTAAGGCAGCTTTGCTTTTGTCCC ATTTGTTTCAATTTA TERM 2838 2067014 - 2067072 + H 78 -7.1 -4.53439 | gap 3, opp_overlap 2067021 2067022, overlap 2067013 2067022 AGTGATAATGAGCAG -GG-ACAAAGGCAAAGCTGCCTCGACAC ATAAAA GT-TTAAGGCAGCTTTGCTTTTGTCCCA TTTGTTTCAATTTAA TERM 2839 2067022 - 2067062 + H 100 -9.9 -4.45577 | gap 1, opp_overlap 2067021 2067022, overlap 2067013 2067014 TGAGCAGGGACAAAG GCAAAGCTGCCTCGACAC ATAAAA GT-TTAAGGCAGCTTTGC TTTTGTCCCATTTGT TERM 2840 2067062 - 2067022 - H 73 -9.9 -2.95896 | gap 1, opp_overlap 2067022 2067013 2067014, overlap 2067021 TGAGCAGGGACAAAG GCAAAGCTGCCTCGACAC ATAAAA GTTT-AAGGCAGCTTTGC TTTTGTCCCATTTGT TERM 2841 2067736 - 2067718 - g 77 -10.3 -3.5774 | ATTCAAGCGGCCAAA GAGGCCA AGTTA TGGCCTC TGAAGATCAACGTTG Dhaf_1930 2067271 - 2068230 + | molybdenum cofactor biosynthesis protein A Dhaf_1931 2068373 - 2069299 + | hypothetical protein TERM 2842 2069363 - 2069401 + F 100 -19.1 -4.77759 | opp_overlap 2069363 AGTGAAAAGGAAAAA TTGAAGCCTAAGATCGG TTTTC CCGTTCTTAGGCTTCAA TTTTTCCTGAATTAT TERM 2843 2069401 - 2069363 - f 100 -19.1 -5.10154 | opp_overlap 2069363 AGTGAAAAGGAAAAA TTGAAGCCTAAGATCGG TTTTC CCGTTCTTAGGCTTCAA TTTTTCCTGAATTAT Dhaf_1932 2069436 - 2069699 + | hypothetical protein Dhaf_1933 2070354 - 2069773 - | DNA-3-methyladenine glycosylase I TERM 2844 2069831 - 2069819 - G 73 -7.7 -4.10552 | GGGCAGGAAACTAAA TGGTC ATT GACCA TCCCCACACCCTGCA TERM 2845 2070046 - 2070069 + g 74 -3 -5.1383 | overlap 2070051 TGTGAAGTATGCTTT GGCGTTGCTG ATAG CAGCATTGAC TTTTTGTCTGTTCTT TERM 2846 2070399 - 2070387 - R 76 -10.5 -2.92389 | opp_overlap 2070385 2070384 2070393 TAATGTATCTATATA GGCGC ACG GCGCC GGCTGTTTACAGTTC Dhaf_1934 2072349 - 2070406 - | peptidase M56 BlaR1 TERM 2847 2072000 - 2071980 - G 71 -8.3 -3.67976 | GGGACGAAGTTGAAA CTGAATCAG AGG CTGAATCAG AAATGGAGGCAGAGA Dhaf_1935 2072718 - 2072350 - | transcriptional repressor, CopY family Dhaf_1936 2073141 - 2073248 + | hypothetical protein TERM 2848 2078303 - 2078322 + G 71 -9.2 -3.52906 | opp_overlap 2078302 2078303, overlap 2078302 GGCGGTAACAGCAAT GCCGGACC GGGC GGTGCGGC TATTTATGCCCGTGA TERM 2849 2080192 - 2080174 - g 75 -10.2 -3.29096 | TGCAGTAACCATCAA CCGGGAGG CAT CCTCGCGG GGTGATAATGATGAC Dhaf_1937 2073245 - 2081899 + | putative cell wall binding repeat 2-containing protein TERM 2850 2081962 - 2081997 + T 100 -18.4 -3.34895 | opp_overlap 2081962 CATCTAATAATAAAA GCACTCCCTGTCCGCT CAAA ACCGGATAGGGAGTGC TTGCTTACAGGTAAC TERM 2851 2081997 - 2081962 - T 100 -16.2 -4.91084 | opp_overlap 2081962 CATCTAATAATAAAA GCACTCCCTGTCCGCT CAAA ACCGGATAGGGAGTGC TTGCTTACAGGTAAC Dhaf_1938 2082722 - 2082012 - | protein of unknown function DUF421 TERM 2852 2082877 - 2082855 - H 77 -10.8 -2.74286 | opp_overlap 2082859, overlap 2082859 AATAACCGTTAAGGA TTAAGATAAC GAT GTTATCTTAA TGTAAAGCATGGAGG TERM 2853 2083455 - 2083481 + G 73 -3.7 -5.00616 | CCCCGGGAGCGGGCT GTGGAGTATAC CAGCA GTATCTTCCGC TTTTTTGCGGCAGGA Dhaf_1939 2082903 - 2083523 + | transcriptional regulator, TetR family TERM 2854 2083556 - 2083524 - f 76 -9.9 -3.29511 | TTTATCGGTGCATAA TTCCCTCTTTCCAAC TCT ATAGGAAAGGGGGAA TATAAAATCAACTGG TERM 2855 2083847 - 2083817 - g 77 -3.1 -5.26875 | gap 1, opp_overlap 2083818 CTGGGAAGCAAAAAA CCGGCACG-GCGCG TCTG CTCGAACTTGCCGG TACCAAAAAACCGCT Dhaf_1940 2083792 - 2085606 + | ABC transporter related TERM 2856 2086084 - 2086099 + G 76 -9 -3.87815 | CTTCTATGATTGGCG GATGGC TTTG GCCATC TTTATCACGGTGCCC TERM 2857 2086293 - 2086283 - g 71 -4.6 -4.56775 | AGCGCCTTGGAAAAA GCCC TGC GGAC CATGAAAAAACTGGC TERM 2858 2086710 - 2086696 - g 76 -11.4 -2.76696 | overlap 2086695 CGCTGGGGGAATAAC GGCCCT GGT AGGGCC TTCCGGCAGCGGCAA TERM 2859 2086982 - 2086994 + G 75 -7.7 -4.18018 | AGCCGGATGCCCGAG GGGTA TGA TACCC TTTTGGGTGAGAACG Dhaf_1941 2085599 - 2087344 + | ABC transporter related TERM 2860 2087392 - 2087438 + T 100 -18.9 -4.07568 | opp_overlap 2087394 2087399, overlap 2087393 CAAGGGGAATGTGAC AACCAAAGACGGACTATCGGC GTAAA GCTGATAGTCCGTCTTTGGCA TTTTGAGGGGCAAAG TERM 2861 2087393 - 2087437 + T 100 -22.4 -3.04398 | opp_overlap 2087394 2087399, overlap 2087392 AAGGGGAATGTGACA ACCAAAGACGGACTATCGGC GTAAA GCTGATAGTCCGTCTTTGGC ATTTTGAGGGGCAAA TERM 2862 2087436 - 2087394 - T 100 -23.7 -3.36671 | opp_overlap 2087393 2087392, overlap 2087399 AGGGGAATGTGACAA CCAAAGACGGACTATCGGC GTAAA GCTGATAGTCCGTCTTTGG CATTTTGAGGGGCAA TERM 2863 2087431 - 2087399 - T 100 -16.4 -4.00526 | opp_overlap 2087393 2087392, overlap 2087394 AATGTGACAACCAAA GACGGACTATCGGC GTAAA GCTGATAGTCCGTC TTTGGCATTTTGAGG Dhaf_1942 2088194 - 2087469 - | Methyltransferase type 11 TERM 2864 2088260 - 2088242 - H 100 -11 -6.17669 | AAGAAAACAAAAAAA GCACAGTG TGA CACTGCGC TACAAATTACACCAT TERM 2865 2088346 - 2088333 - H 82 -6.7 -4.79657 | opp_overlap 2088333, overlap 2088336 ACAACACTAATAAAA GCAGA ACAA TCTGC TCGTTTCATGTTCTT TERM 2866 2088575 - 2088555 - H 82 -8.5 -4.27617 | opp_overlap 2088555 2088558 TATACTCTATTAAAA TAATGATAA TGA TTATCATTA TATATGCATTTTTAA Dhaf_1943 2088610 - 2088831 + | hypothetical protein TERM 2867 2089339 - 2089362 + G 90 -6.1 -5.38047 | opp_overlap 2089341, overlap 2089341 ATTTTAAAGAGAGAT TATGACACT TCAGGC AGTGTCATG TTTTTTCTCTCCGTA TERM 2868 2089341 - 2089360 + G 74 -6.5 -4.31943 | opp_overlap 2089341, overlap 2089339 TTTAAAGAGAGATTA TGACACT TCAGGC AGTGTCA TGTTTTTTCTCTCCG TERM 2869 2090702 - 2090685 - g 73 -4.8 -4.72986 | gap 1 GATTGCCATGAAAAA CGGCGCG GATAT CGC-CCG GGATATCGCCGATGT Dhaf_1944 2088856 - 2090943 + | heavy metal translocating P-type ATPase Dhaf_1945 2091839 - 2091045 - | ABC transporter related Dhaf_1946 2092731 - 2091832 - | inner-membrane translocator Dhaf_1947 2093750 - 2092767 - | protein of unknown function DUF534 TERM 2870 2093516 - 2093526 + g 70 -2.4 -4.9218 | TCAGGGTTGCTGTGT CCCC ATT GGCG TTTTTGTAGTCGATG TERM 2871 2093818 - 2093856 + r 95 -12.5 -3.36327 | gap 1, opp_overlap 2093818 GGAATATGCAAAAAA GCCTGCCCATGA-TACGG ATAC CCGTAATCAAGGACAGGC TTATACCTGCGGTGC TERM 2872 2093856 - 2093818 - R 100 -14.7 -5.1615 | gap 1, opp_overlap 2093818 GGAATATGCAAAAAA GCCTGCCCATGA-TACGG ATAC CCGTAATCAAGGACAGGC TTATACCTGCGGTGC Dhaf_1948 2095026 - 2094193 - | anaerobic dimethyl sulfoxide reductase subunit C Dhaf_1949 2095604 - 2095029 - | dimethylsulfoxide reductase, chain B Dhaf_1950 2098200 - 2095624 - | molybdopterin oxidoreductase TERM 2873 2095766 - 2095781 + g 87 -6.8 -5.17353 | ATATTGTCCGCTCCT CCGGTA TCGA TGCCGG TTTTTTCATCCATAT TERM 2874 2100118 - 2100132 + G 75 -5.7 -4.5032 | TTGAAAACAGCACTA CGTCA GTTAA TGACG TTTGTTCTTAATCTA Dhaf_1951 2098906 - 2100258 + | transposase IS4 family protein Dhaf_1952 2101712 - 2100468 - | transposase IS4 family protein TERM 2875 2101720 - 2101771 + H 77 -3.9 -5.2112 | gap 1, overlap 2101759 TCCTGCATTGTTATC TCCTTATAATTTGAGATTTGGGCA AGGAC TACCCTA-TCTCTTATTATAAGGA TTTTTTCATGATGTT Dhaf_1953 2102094 - 2102303 + | protein of unknown function UPF0150 TERM 2876 2102309 - 2102356 + T 100 -21.6 -3.90112 | gap 1, opp_overlap 2102310 2102315, overlap 2102310 2102312 ATTTGCATAAGATCA AGATAAGGCCCTTGACACTTCCT GCC GGGAAG-GTCAAGGGCCTTATCG TTTACTTGGGCACGA TERM 2877 2102310 - 2102355 + T 100 -25.1 -2.93853 | gap 1, opp_overlap 2102310 2102315, overlap 2102309 2102312 TTTGCATAAGATCAA GATAAGGCCCTTGACACTTCCT GCC GGGAAG-GTCAAGGGCCTTATC GTTTACTTGGGCACG TERM 2878 2102355 - 2102310 - T 100 -24.4 -3.41745 | gap 1, opp_overlap 2102310 2102309 2102312, overlap 2102315 TTTGCATAAGATCAA GATAAGGCCCTTGACACTTCC TGCCG GGAAG-GTCAAGGGCCTTATC GTTTACTTGGGCACG TERM 2879 2102312 - 2102353 + T 100 -21.9 -3.02166 | gap 1, opp_overlap 2102310 2102315, overlap 2102310 2102309 TGCATAAGATCAAGA TAAGGCCCTTGACACTTCCT GCC GGGAAG-GTCAAGGGCCTTA TCGTTTACTTGGGCA TERM 2880 2102350 - 2102315 - T 100 -18.5 -3.76771 | gap 1, opp_overlap 2102312 2102310 2102309, overlap 2102310 ATAAGATCAAGATAA GGCCCTTGACACTTCC TGCCG GGAAG-GTCAAGGGCC TTATCGTTTACTTGG Dhaf_1954 2103226 - 2102393 - | anaerobic dimethyl sulfoxide reductase subunit C Dhaf_1955 2103804 - 2103229 - | dimethylsulfoxide reductase, chain B Dhaf_1956 2106397 - 2103824 - | molybdopterin oxidoreductase TERM 2881 2103966 - 2103981 + g 87 -6.8 -5.17353 | ATATTGTCCGCTCCT CCGGTA TCGA TGCCGG TTTTTTCATCCATAT TERM 2882 2106025 - 2106035 + g 79 -2.4 -5.49569 | CTTTCTTGCCCCCGC CCGG TTC CCAG TTTTTTCTCTTCATC Dhaf_1957 2106790 - 2107770 + | daunorubicin resistance ABC transporter ATPase subunit Dhaf_1958 2107767 - 2108519 + | ABC-2 type transporter TERM 2883 2108871 - 2108884 + G 75 -8.1 -4.13945 | GATCTAGGCATAGCG GCCAC CAAT GTGGC TTTTCCCCTGGCGAT TERM 2884 2109771 - 2109784 + G 74 -3.8 -4.84219 | ATATTGAGCATTTTC GGGT CCGGCA ACCC TTTGTTTTATGATTT Dhaf_1959 2108700 - 2110118 + | multi antimicrobial extrusion protein MatE Dhaf_1960 2110202 - 2110801 + | transcriptional regulator, TetR family TERM 2885 2110875 - 2110821 - f 100 -13.3 -4.08767 | gap 1, opp_overlap 2110822, overlap 2110822 2110838 GGCACTGTGTTAAAA TTCAGCTGTTTT-AAAAATGAGGAAG CAGG CTTCGTCATTTTTAAAAACAGCCGAT TTTTAAACTGGAGGG TERM 2886 2110822 - 2110874 + F 100 -14.6 -4.62069 | gap 1, opp_overlap 2110821 2110822 2110838 GCACTGTGTTAAAAT TCAGCTGTTTT-AAAAATGAGGAAG CAGG CTTCGTCATTTTTAAAAACAGCCGA TTTTTAAACTGGAGG TERM 2887 2110874 - 2110822 - f 100 -16.8 -3.05046 | gap 1, opp_overlap 2110822, overlap 2110821 2110838 GCACTGTGTTAAAAT TCAGCTGTTTT-AAAAATGAGGAAG CAGG CTTCGTCATTTTTAAAAACAGCCGA TTTTTAAACTGGAGG TERM 2888 2111109 - 2111130 + F 89 -3.8 -5.63504 | gap 1, opp_overlap 2111109 CGGTTAAGCAACCAA GACGA-AGA TGTTC TCTATCGTC TTTTTTTGTGCCCTT Dhaf_1961 2111179 - 2112912 + | ABC transporter related Dhaf_1962 2113030 - 2113782 + | transcriptional regulator, MerR family TERM 2889 2113856 - 2113817 - T 81 -9.3 -3.87538 | opp_overlap 2113820, overlap 2113819 2113820 AAAGGATTAGAATAA TAGGGAAGACCTGCTCT TTTTGG AGGGCAGGTCTTCCTTT GTACACATGCCCTGT TERM 2890 2113854 - 2113819 - T 91 -11.9 -3.5121 | opp_overlap 2113820, overlap 2113817 2113820 AGGATTAGAATAATA GGGAAGACCTGCTCT TTTTGG AGGGCAGGTCTTCCT TTGTACACATGCCCT TERM 2891 2113820 - 2113853 + T 100 -18.3 -3.87815 | opp_overlap 2113819 2113817 2113820 GGATTAGAATAATAG GGAAGACCTGCTCTT TTTG GAGGGCAGGTCTTCC TTTGTACACATGCCC TERM 2892 2113853 - 2113820 - T 100 -15.4 -2.70003 | opp_overlap 2113820, overlap 2113819 2113817 GGATTAGAATAATAG GGAAGACCTGCTCT TTTTGG AGGGCAGGTCTTCC TTTGTACACATGCCC Dhaf_1963 2116153 - 2113907 - | helicase TERM 2893 2115757 - 2115733 - G 71 -8.6 -3.71804 | overlap 2115731 2115735 CGAAACGGTAAAAGA CACTGGCGAT GGGTG ATCGCCAGTC ATAGATAGTGATGTC TERM 2894 2115755 - 2115735 - G 78 -11.2 -3.43039 | overlap 2115731 2115733 AAACGGTAAAAGACA CTGGCGAT GGGTG ATCGCCAG TCATAGATAGTGATG TERM 2895 2117076 - 2117063 - g 77 -6.7 -4.65895 | GGCCGGAGTCAAAAA CTGCT CAGG AGCAG CCGGTATCCGCGTTA Dhaf_1964 2116474 - 2117580 + | membrane protein AbrB duplication TERM 2896 2118114 - 2118150 + G 85 -10.7 -3.90744 | TCGTTCTAACGGACG GTCCTCCGGCTACTCCG CCT TGGGGAGGCCGGAAGGC TTATTTCGGAACGAA TERM 2897 2118327 - 2118347 + G 71 -6.7 -4.29738 | TGCCTACGACAGATC CCCAGGCTG CCT TGGCCGGGG TTTTACTGCCTATGG Dhaf_1965 2117684 - 2118733 + | Malate/L-lactate dehydrogenase Dhaf_1966 2118785 - 2120671 + | putative sigma54 specific transcriptional regulator TERM 2898 2120674 - 2120703 + F 70 -3.6 -4.89054 | gap 1, opp_overlap 2120674 GGAAAATCTTTAAGA CCATACATGCCGT CGTTT GCGG-AAGTATGG TTATTTTTTTGTGCA TERM 2899 2120833 - 2120816 - f 70 -2.7 -5.02074 | opp_overlap 2120816, overlap 2120818 CTATTTTCTAAAAAA TGTCCAA GTTA TTGGAAA ATTTAAAACCCATTG Dhaf_1967 2121032 - 2122060 + | 4-hydroxythreonine-4-phosphate dehydrogenase Dhaf_1968 2122064 - 2122960 + | 3-hydroxyisobutyrate dehydrogenase TERM 2900 2122975 - 2122961 - f 77 -8.6 -4.02817 | opp_overlap 2122960, overlap 2122936 TCCCCAGAAGAATAA CGGAAT GTG ATTCCG GTAGTATAAAGGGGC Dhaf_1969 2122999 - 2123811 + | Xylose isomerase domain protein TIM barrel TERM 2901 2124872 - 2124840 - g 71 -7 -4.07885 | GAGCCGTTCTGAAAA TCATGGCCCCCT TGCTTAATC AGGAGGCCCTGA CCGTAACCGGGGGGA Dhaf_1970 2123840 - 2125510 + | Dihydroxy-acid dehydratase TERM 2902 2126555 - 2126539 - g 75 -3.5 -5.04385 | GATATGTTTAAAAAA GCCGTCG ATA CCCCGGC TTGGAAGGAATTCGT Dhaf_1971 2125666 - 2126676 + | hypothetical protein TERM 2903 2127186 - 2127196 + G 71 -6.8 -4.26903 | TTGGGACGTCCCTGT GTGG GAA CCAC TTTTGCTGAAGTGGA Dhaf_1972 2126832 - 2127572 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 2904 2128092 - 2128066 - g 73 -8 -4.11216 | GCCTGATTTCCAAAA CTTTAGTGGCGG AAA CCATCACCAAAG TGCGTCAGGGCAAAA Dhaf_1973 2127585 - 2128256 + | hypothetical protein Dhaf_1974 2128259 - 2128711 + | hypothetical protein Dhaf_1975 2128723 - 2130234 + | protein of unknown function DUF112 transmembrane Dhaf_1976 2130271 - 2130990 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1977 2130994 - 2131629 + | hypothetical protein TERM 2905 2131997 - 2132011 + G 75 -11.4 -2.73875 | overlap 2131994 TTGCCGCCGGAGCAG GGGCTG ACG CAGCCC TGGTATTAAGCCCGA Dhaf_1978 2131708 - 2132598 + | dihydrodipicolinate synthetase Dhaf_1979 2132752 - 2133369 + | fumarylacetoacetate (FAA) hydrolase Dhaf_1980 2133359 - 2134372 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 2906 2134377 - 2134404 + F 100 -14.9 -4.32482 | TTGTCCTATAGTCAG CCCCCGGTCAC AGGGAA GTGATCGGGGG TTTTCCATTCTGAGT TERM 2907 2134501 - 2134475 - f 82 -3.1 -5.57888 | gap 1, overlap 2134477 ATTAAAAAAATAAAA TCCATAT-TGAC ATAT GTCATAAATGGA GTATACTGAGCATAG Dhaf_1981 2134553 - 2134930 + | protein of unknown function DUF134 Dhaf_1982 2134974 - 2135342 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein Dhaf_1983 2135344 - 2136219 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_1984 2136197 - 2137060 + | Cobyrinic acid ac-diamide synthase Dhaf_1985 2137094 - 2137942 + | nucleotide-binding protein TERM 2908 2138059 - 2138074 + G 80 -4.6 -5.10497 | GCTGCCTGCCAAACC CTGGGC ATAA GCCTGG TTTTTTGCCTAACTT Dhaf_1986 2137935 - 2138294 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 2909 2138387 - 2138343 - f 100 -10.8 -4.90455 | gap 1, opp_overlap 2138351 2138384, overlap 2138346 2138347 AGACAGTCAGAAAAA TAACCAAAGAGGGCGACTGGC AGAT GCCAGAAGCCCTCTTT-GCCA TAGAGTATGCCCTGT TERM 2910 2138385 - 2138346 - f 100 -15 -4.5448 | opp_overlap 2138351 2138384, overlap 2138343 2138347 CAGTCAGAAAAATAA CCAAAGAGGGCGACTGGC AGAT GCCAGAAGCCCTCTTTGC CATAGAGTATGCCCT TERM 2911 2138384 - 2138347 - f 100 -18.5 -3.31603 | opp_overlap 2138351, overlap 2138346 2138343 AGTCAGAAAAATAAC CAAAGAGGGCGACTGGC AGAT GCCAGAAGCCCTCTTTG CCATAGAGTATGCCC TERM 2912 2138351 - 2138380 + F 100 -13.5 -3.60805 | opp_overlap 2138347 2138346 2138343 AGAAAAATAACCAAA GAGGGCGACTGGC AGAT GCCAGAAGCCCTC TTTGCCATAGAGTAT Dhaf_1987 2138677 - 2139117 + | hypothetical protein TERM 2913 2139145 - 2139159 + T 73 -10 -3.00298 | opp_overlap 2139145 AAAAGAGTATGTAAA GCAAGG AAG CCTTGC TCTATAGTTGACCCC TERM 2914 2139159 - 2139145 - T 80 -10 -3.73281 | opp_overlap 2139145 AAAAGAGTATGTAAA GCAAGG AAG CCTTGC TCTATAGTTGACCCC Dhaf_1989 2141561 - 2139669 - | ABC-type phosphate transport system periplasmic component-like protein Dhaf_1990 2141916 - 2142296 + | protein of unknown function DUF1312 TERM 2915 2142326 - 2142368 + F 81 -5.4 -5.14563 | TTTGAGATTTATACT GAGCTTGTTCAGGTGGCGCA AAA TGGGCATCCTGAGTCGGCTC TTTTTTGATGCGCCA TERM 2916 2143896 - 2143862 - f 85 -5.8 -5.1861 | gap 1, opp_overlap 2143848, overlap 2143848 2143863 2143864 GCTATCAGCAAAAAA GCGGATAGTTTTGCC GCTCAG GGCAATACCATCC-C AGAGCTCCTCCGCAA TERM 2917 2143895 - 2143864 - f 70 -9.5 -2.81543 | opp_overlap 2143848, overlap 2143848 2143862 2143863 TATCAGCAAAAAAGC GGATAGTTTTGCC GCTCAG GGCAATACCATCC CAGAGCTCCTCCGCA TERM 2918 2144562 - 2144542 - g 71 -8.9 -3.53444 | CGATTGGCTGGGAAA GGCGCCTCA GAT CGAGGCGAC CGCCATCAAAGAAGT TERM 2919 2144903 - 2144882 - g 75 -11.6 -2.59935 | overlap 2144881 AAATACGTTCAGAAT TCCGGTCC CATGCT GGACCGGA TGATGGAAATCTACG TERM 2920 2145532 - 2145518 - g 88 -7.1 -5.03314 | overlap 2145520 TGCATGGGCAAAAAA TCCGG TCCTT CCGGA CCATGGGGAGCAGGC TERM 2921 2145584 - 2145572 - g 81 -3.3 -5.46657 | CAGCTCAATAAAAAA GGCAG GCG CTTCC ATAATGAAGCAGGTA Dhaf_1992 2144324 - 2146273 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein Dhaf_1993 2146385 - 2147491 + | HemN domain protein TERM 2922 2147622 - 2147612 - g 70 -2.4 -4.98255 | opp_overlap 2147611 2147610 TTCCAAGCAGAAAAA GGGG AGC CCCT GTTTGTACACGTGTA Dhaf_1994 2147528 - 2148238 + | two component transcriptional regulator, LytTR family TERM 2923 2149951 - 2149969 + G 73 -4.5 -4.66537 | GCTGGGTTTCCGGTT CCCCG TCAAGGTCT CGGGG TTTTATGTTACCCGG Dhaf_1996 2149631 - 2150344 + | cytochrome c biogenesis protein transmembrane region TERM 2924 2150365 - 2150393 + F 100 -14.6 -4.59853 | opp_overlap 2150365 2150357 GAACAAATTAGCAAA TGGCTGCTGCCT TAATC AGGCTGCAGCCA TTTTTGAGAGATTGG TERM 2925 2150393 - 2150365 - f 100 -14.6 -3.92804 | opp_overlap 2150365, overlap 2150357 GAACAAATTAGCAAA TGGCTGCTGCCT TAATC AGGCTGCAGCCA TTTTTGAGAGATTGG Dhaf_1997 2150575 - 2151165 + | hypothetical protein TERM 2926 2151238 - 2151199 - f 100 -14.4 -3.0644 | gap 1, opp_overlap 2151199, overlap 2151190 AGCTAAGCGTGAATA CCCGGGGCAAAAC-GGATC GAT GATCATGTTTTGTCCCGGG TTTATTGCTTGCGGG TERM 2927 2151199 - 2151238 + F 100 -18.8 -4.3255 | gap 1, opp_overlap 2151199 2151190 AGCTAAGCGTGAATA CCCGGGGCAAAACG-GATC GAT GATCATGTTTTGTCCCGGG TTTATTGCTTGCGGG Dhaf_1998 2151322 - 2152098 + | helix-turn-helix- domain containing protein AraC type Dhaf_1999 2152146 - 2152850 + | transglutaminase domain protein TERM 2928 2152898 - 2152913 + F 100 -8.2 -5.24989 | opp_overlap 2152898 CCTTATTCCTTAAAA CGCCTC ACAG GGGGCG TTTTTTCATGTGTGA TERM 2929 2153033 - 2152981 - f 100 -17.5 -3.53012 | opp_overlap 2152990, overlap 2152982 2152985 2152990 CTTCTTCCTGGCAAA GGCATACAATCTATATGACTAAAAC AAT ATTTTAGTCATATAGATTGTATGAG GTGAAGAGATGCCGA TERM 2930 2153032 - 2152982 - f 100 -21 -2.71712 | opp_overlap 2152990, overlap 2152981 2152985 2152990 TTCTTCCTGGCAAAG GCATACAATCTATATGACTAAAAC AAT ATTTTAGTCATATAGATTGTATGA GGTGAAGAGATGCCG TERM 2931 2153029 - 2152985 - f 100 -21.3 -2.64155 | opp_overlap 2152990, overlap 2152982 2152981 2152990 TTCCTGGCAAAGGCA TACAATCTATATGACTAAAAC AAT ATTTTAGTCATATAGATTGTA TGAGGTGAAGAGATG TERM 2932 2153024 - 2152990 - f 100 -15.4 -3.57797 | opp_overlap 2152990, overlap 2152985 2152982 2152981 GGCAAAGGCATACAA TCTATATGACTAAAAC AAT ATTTTAGTCATATAGA TTGTATGAGGTGAAG TERM 2933 2152990 - 2153024 + F 100 -14.7 -3.50393 | opp_overlap 2152990 2152985 2152982 2152981 GGCAAAGGCATACAA TCTATATGACTAAAA CAATA TTTTAGTCATATAGA TTGTATGAGGTGAAG Dhaf_2000 2153042 - 2153623 + | transcriptional regulator, TetR family TERM 2934 2153782 - 2153772 - g 82 -5.4 -5.02074 | GTACTTTGCAAAAAA TCCT CAC AGGA GTGTTGAGAGACTAT TERM 2935 2154040 - 2154083 + G 95 -8.1 -5.47218 | gap 1, opp_overlap 2154040 2154039, overlap 2154044 CAAAGGGATGAAGAT GCGTCTGGGTTTTGTGC-GC TGCCT GCTGCACAATCCCCAGCTGC TTTTTTTGGATGAAC TERM 2936 2154441 - 2154452 + G 70 -2.2 -4.94992 | ACTCCAAAGAGCGGA CCTT GGAG GAGG TTTTTATAGCTTTGA Dhaf_2001 2153627 - 2154487 + | ABC transporter related TERM 2937 2154752 - 2154775 + G 75 -11.8 -2.6381 | opp_overlap 2154749 2154747 CAATTGAATATATTT TGGCCAAAGG GTTG TCTTTGGCCA TGATCTCCACCTTGT TERM 2938 2154842 - 2154856 + G 74 -10 -3.54 | overlap 2154843 CAGCGGACTATCCTT TGCTGC TCA GCAGCA TCTTTGTAGGCTCCT Dhaf_2002 2154484 - 2155188 + | ABC-2 type transporter Dhaf_2003 2155185 - 2155892 + | hypothetical protein TERM 2939 2156262 - 2156234 - g 73 -5.2 -4.59773 | overlap 2156247 CCCCAGTTGGAAAAA TCCCTGGAGAAG ATCGG CTTCACCGAGGA GGAGCAACTGCGGGT Dhaf_2004 2156051 - 2157199 + | hypothetical protein TERM 2940 2158087 - 2158103 + G 73 -7.9 -4.05446 | overlap 2158088 GCCAAATCGATCTTC TCCGGCG CAG TGCCGGG TTTATCGTTACACCG Dhaf_2005 2157234 - 2158934 + | zinc finger SWIM domain protein TERM 2941 2159202 - 2159186 - g 91 -9.5 -4.59207 | opp_overlap 2159186 2159183, overlap 2159178 AGAAAGAGGAGAAAA TCGTTTC ACC GAAACGA TGCTTTTGGGAAATC Dhaf_2006 2159047 - 2159229 + | hypothetical protein TERM 2942 2159243 - 2159269 + F 77 -10.2 -3.18031 | opp_overlap 2159243 2159242, overlap 2159241 AGACAAGTAAGCAAT CCCCCTCAGA CTGAAGT TTTGAGGGGG TGTAATTTTTGAGGG TERM 2943 2159324 - 2159295 - f 100 -10.9 -4.63932 | opp_overlap 2159301 GAGGGGGGAAGAAAA TTCAAATGTTGCA CCGG TGCACCATTTGAA TCTCCGGCAGTTTTA Dhaf_2007 2159419 - 2160138 + | protein of unknown function DUF1113 Dhaf_2008 2160089 - 2160661 + | HD family hydrolase TERM 2944 2160659 - 2160688 + F 73 -5.7 -4.57569 | opp_overlap 2160662 2160667 GAAGAATTGACGGAA TAAGCAATGGAGA TGTC TCTCCCATGCTTG TTTTTAGAGCGGTGA Dhaf_2009 2160830 - 2161603 + | DNA binding domain protein, excisionase family TERM 2945 2161767 - 2161755 - g 77 -4.8 -4.96845 | ATAAAAAGAAAGAAA TCGG TCAGT CCGA AAAAATCCTCAATGC TERM 2946 2162200 - 2162176 - g 77 -8.6 -4.27316 | opp_overlap 2162176 2162179, overlap 2162179 TGCCCCAAGGCAAAA TAGTGACGGC TATTC GCCGTCAGTA TTATCCAGGATTACC TERM 2947 2162197 - 2162179 - g 71 -10.3 -2.83906 | opp_overlap 2162179 2162176, overlap 2162176 CCCAAGGCAAAATAG TGACGGC TATTC GCCGTCA GTATTATCCAGGATT Dhaf_2010 2161736 - 2162317 + | transcriptional regulator, TetR family TERM 2948 2162737 - 2162711 - f 71 -8.7 -3.30441 | gap 1, opp_overlap 2162704, overlap 2162712 CATGACTTGCGAGAA GTCCCCCGTCCT CCAC AGG-CGGGGGAT GAATCGCTCTATGCG TERM 2949 2162736 - 2162712 - f 83 -12.2 -2.5805 | gap 1, opp_overlap 2162704, overlap 2162711 ATGACTTGCGAGAAG TCCCCCGTCCT CCAC AGG-CGGGGGA TGAATCGCTCTATGC Dhaf_2011 2162831 - 2163235 + | transposase IS200-family protein TERM 2950 2163884 - 2163870 - g 77 -2.8 -5.30686 | overlap 2163879 AAGATGGAGAAAAAA CTGG CTAAAGC CCAG CGGAGGCTTTCCCGC Dhaf_2012 2163240 - 2164328 + | transposase, IS605 OrfB family Dhaf_2013 2164663 - 2165418 + | methyl-accepting chemotaxis sensory transducer TERM 2951 2165417 - 2165407 - f 73 -2.6 -5.22039 | GTGAAACTGAAAAAA TATA AGC TATA GTGTACCGGAATGAT TERM 2952 2165477 - 2165463 - f 71 -7 -4.09685 | opp_overlap 2165463 GCCTATTTCTTAAAA CGCCTC GCA GGGGCG TTTTTTATTTACTAC TERM 2953 2165463 - 2165477 + F 100 -9.2 -5.68438 | opp_overlap 2165463 GCCTATTTCTTAAAA CGCCTC GCA GGGGCG TTTTTTATTTACTAC TERM 2954 2167040 - 2167025 - g 70 -2.4 -4.99035 | overlap 2167039 CTATGGAGATAAAAA GGCCAC CCAG GAGACC TTAGCCAAGGCAGCC TERM 2955 2167118 - 2167098 - g 79 -9.7 -3.81146 | GCGGCCAAGGAAGAA GGCTATGAC TCG GTCATCGCC CAGGGCGGCACCAAT Dhaf_2014 2165724 - 2167457 + | ABC transporter related TERM 2956 2167490 - 2167476 - g 71 -2.8 -4.96501 | CTGCAGAAAAACAAA CAGG TTTCGGG CCTG GTCGCCAGGGTCCGG TERM 2957 2167629 - 2167646 + G 74 -4.1 -4.89521 | opp_overlap 2167632, overlap 2167632 TAACTCCCCATAAGA CAACGAT TTCC ATCGTGG TTTTCTTTGCCCTCT Dhaf_2015 2167454 - 2169349 + | ABC transporter related Dhaf_2016 2169384 - 2170937 + | secretion protein HlyD family protein Dhaf_2017 2171098 - 2171556 + | transcriptional regulator, MarR family Dhaf_2018 2171666 - 2172232 + | nitroreductase Dhaf_2019 2172486 - 2172803 + | hypothetical protein TERM 2958 2172856 - 2172823 - f 88 -9.8 -4.22041 | gap 1, opp_overlap 2172823 AAACGGGAATATAAA CAGCACTGCCTTTCA CAATC TGAAA-GCAATGCTG TTTTTGCACTTTATA TERM 2959 2172823 - 2172856 + F 86 -7.6 -4.72486 | gap 1, opp_overlap 2172823 AAACGGGAATATAAA CAGCACTGCCTTTCA CAATC TGAAA-GCAATGCTG TTTTTGCACTTTATA Dhaf_2020 2172944 - 2173423 + | GCN5-related N-acetyltransferase TERM 2960 2173546 - 2173519 - f 100 -11.3 -4.92791 | overlap 2173538 TATAATATAAGAAAA GGACCGACGTG ATGCAA CACGTCAGCCC TGCAGGCTGTCTAAC Dhaf_2021 2173530 - 2173700 + | hypothetical protein TERM 2961 2173723 - 2173698 - T 100 -9.1 -5.72254 | opp_overlap 2173698 CTAAATAATAAAAAA TGAAGCAGGTT GTTT AACTTGCTTCA TTTTTTTAGACCTTT TERM 2962 2173698 - 2173723 + T 100 -11.3 -5.4477 | opp_overlap 2173698 CTAAATAATAAAAAA TGAAGCAGGTT GTTT AACTTGCTTCA TTTTTTTAGACCTTT Dhaf_2022 2174029 - 2173721 - | transcriptional regulator, XRE family Dhaf_2023 2174170 - 2174394 + | stage 0 sporulation protein A, two-component response regualtor TERM 2963 2174444 - 2174482 + F 82 -6.9 -4.89393 | gap 2, overlap 2174445 AATACCTGAAGTTTC TGAGCCCTCTG--ATATCC CAT GGATATGGTAGAGGGCTCC TTTTTATGCCGTTTG TERM 2964 2174445 - 2174481 + F 80 -10.4 -3.52551 | gap 2, overlap 2174444 ATACCTGAAGTTTCT GAGCCCTCTG--ATATCC CAT GGATATGGTAGAGGGCTC CTTTTTATGCCGTTT Dhaf_2024 2174462 - 2175361 + | hypothetical protein TERM 2965 2175514 - 2175491 - f 93 -12.6 -3.14881 | opp_overlap 2175489 TAACGGTTTGATGAA TTTGCCCATA AATT TATGGGCAAA GATTAGATTTACAAC Dhaf_2025 2175591 - 2175854 + | addiction module antitoxin, RelB/DinJ family Dhaf_2026 2175858 - 2176121 + | addiction module toxin, Txe/YoeB family TERM 2966 2176137 - 2176164 + F 100 -15.6 -4.26076 | opp_overlap 2176140, overlap 2176162 AATAATTCGGAGGAG CAAGGGGTGGTC AGTG GGCCGCCCCTTG TTTTAATAAAAATAA Dhaf_2027 2176270 - 2176677 + | protein of unknown function UPF0150 TERM 2967 2176743 - 2176726 - f 72 -9.9 -2.78384 | GTCTGTCTTACCAGA TCGGCAA GCGC TTGCCGA TCTGGACTACACTCA Dhaf_2028 2177187 - 2178038 + | transcriptional regulator, MerR family TERM 2968 2178300 - 2178311 + G 71 -4.4 -4.66987 | overlap 2178262 2178261 GGCTGGTGCTGGCCG CCAA TGCC TTGG TTTTCTTGGGCTATA Dhaf_2029 2178152 - 2178637 + | Isoprenylcysteine carboxyl methyltransferase Dhaf_2030 2178697 - 2179011 + | hypothetical protein TERM 2969 2179061 - 2179078 + F 71 -8.5 -3.53012 | opp_overlap 2179061 AGTCCCCCTGCCAAA TTGGCAA ACGC TTGCCAA TTTGAGCGGCGAAGG TERM 2970 2179078 - 2179061 - f 71 -8.5 -3.53091 | opp_overlap 2179061 AGTCCCCCTGCCAAA TTGGCAA ACGC TTGCCAA TTTGAGCGGCGAAGG TERM 2971 2179138 - 2179175 + F 100 -6.4 -5.9003 | opp_overlap 2179139, overlap 2179139 AGAACAGCATGAAAA TCCCTTGGTTCGAATG GTATAA TATTCGAATAAAGGGG TTTTTTTCTTACTTT TERM 2972 2179139 - 2179174 + F 76 -7.7 -4.10357 | opp_overlap 2179139, overlap 2179138 GAACAGCATGAAAAT CCCTTGGTTCGAATG GTATAA TATTCGAATAAAGGG GTTTTTTTCTTACTT TERM 2973 2180067 - 2180089 + G 73 -9.8 -3.41988 | opp_overlap 2180057 2180067 2180066, overlap 2180066 AGAAACGATGAAAAT CGCCTGGACA AGC TGATCAGGCG TATTATTGAGTCCAA TERM 2974 2181230 - 2181210 - g 73 -5.4 -4.65895 | opp_overlap 2181225 CGGGCTATGGAAAAA TTCCGGGA CGTGT TTCCGGAA GAGTACGGTGTATTT TERM 2975 2181483 - 2181465 - g 82 -5.2 -5.05116 | overlap 2181480 TTAGAAAGAAGAAAA GCCGCCTT TGC AAAGCCGC CACATGGGGGTATGG Dhaf_2031 2179254 - 2182706 + | AAA ATPase TERM 2976 2184273 - 2184287 + G 75 -5.7 -4.5032 | TTGAAAACAGCACTA CGTCA GTTAA TGACG TTTGTTCTTAATCTA Dhaf_2032 2183061 - 2184413 + | transposase IS4 family protein TERM 2977 2186185 - 2186174 - g 81 -3.6 -5.52384 | CTTCGAGTAAAAAAA CCGC ACGA ACGG ATAATGGAATCAAAT Dhaf_2033 2184808 - 2186307 + | hypothetical protein Dhaf_2034 2186304 - 2187458 + | hypothetical protein TERM 2978 2190311 - 2190327 + G 73 -9.5 -3.36569 | overlap 2190309 AAAATTCAACGTCAA TCTGATC TGC GATCAGA TATTTCAAAGCTTAA Dhaf_2035 2187455 - 2191567 + | chromosome segregation ATPase-like protein TERM 2979 2192673 - 2192690 + G 74 -2.6 -5.03314 | opp_overlap 2192673 AATTGACAAAATGCA GCTGGA GCATGA TCCCGC TTTTTTCACAATGCC Dhaf_2036 2191636 - 2193765 + | serine/threonine protein kinase TERM 2980 2193837 - 2193793 - f 100 -23.9 -3.00022 | opp_overlap 2193798, overlap 2193795 2193798 GTTATCTGAGATATA CAGAACGCCTTAAACAGAGCA AAA TCCTCTGTTCAAGGCGTTCTG TGAATATCACGGTAC TERM 2981 2193835 - 2193795 - f 100 -20.7 -3.05498 | opp_overlap 2193798, overlap 2193793 2193798 TATCTGAGATATACA GAACGCCTTAAACAGAGCA AAA TCCTCTGTTCAAGGCGTTC TGTGAATATCACGGT TERM 2982 2193798 - 2193832 + F 100 -14.4 -3.53722 | opp_overlap 2193795 2193793 2193798 CTGAGATATACAGAA CGCCTTAAACAGAGCA AAA TCCTCTGTTCAAGGCG TTCTGTGAATATCAC TERM 2983 2193832 - 2193798 - f 100 -16.6 -3.66896 | opp_overlap 2193798, overlap 2193795 2193793 CTGAGATATACAGAA CGCCTTAAACAGAGCA AAA TCCTCTGTTCAAGGCG TTCTGTGAATATCAC TERM 2984 2194650 - 2194640 - g 70 -2.4 -5.00616 | GCCCCTCGTAAAAAA GCGG CTA CCGG CAAAAAAATTGCCGT TERM 2985 2196271 - 2196281 + G 77 -4 -5.10154 | TCTGAAAAAGATCGG CTTT GAT AAAG TTTTTGATTTTACCT TERM 2986 2197241 - 2197251 + G 80 -8.2 -4.37886 | opp_overlap 2197240 CATGACCGTAGAATG GCGG ATT CCGC TTTTGTAACCCATGA Dhaf_2037 2194046 - 2197498 + | hydrogenase, Fe-only TERM 2987 2197537 - 2197563 + F 100 -14.6 -4.91109 | overlap 2197528 AAAAAATCAGCTCCT GGGATTGTTTTG TAG CAAGACAATCCC TTTTTATCATCGCCG Dhaf_2038 2197702 - 2198622 + | transcriptional regulator, LysR family TERM 2988 2198660 - 2198688 + F 95 -11.7 -3.8647 | overlap 2198663 CTGCCGATTCTCCGC CGAGCCGAGCCTG CTT TAGGCTGGGCTTG TTTCATGTGATAACT TERM 2989 2198663 - 2198685 + F 86 -9.8 -4.05877 | overlap 2198660 CCGATTCTCCGCCGA GCCGAGCCTG CTT TAGGCTGGGC TTGTTTCATGTGATA TERM 2990 2198778 - 2198754 - f 100 -10.1 -4.65446 | opp_overlap 2198754 ACGATACAGACAAAA TGGATAGGGTA AGA TACCATATCCA TTGTAAGGTGCTTTG TERM 2991 2198754 - 2198778 + F 76 -10.1 -3.3573 | opp_overlap 2198754 ACGATACAGACAAAA TGGATAGGGTA AGA TACCATATCCA TTGTAAGGTGCTTTG TERM 2992 2199045 - 2199032 - g 70 -8.1 -3.91352 | ATATTCCGAAGCAAA CCCTG CAGG CAGGG GTGATCATTGGTTTA TERM 2993 2199063 - 2199079 + G 71 -7.3 -4.08216 | overlap 2199062 2199059 GATCATTGGTTTAGC CATAGCC TGT GGTTATG TTTTGCAGACCATGG TERM 2994 2199108 - 2199126 + G 77 -6.6 -4.57073 | opp_overlap 2199107 2199122 GGGTCTCAATTACAC GTCGGCCT CCA AAGCCGGC TTTTTGGCGGGACTC TERM 2995 2199578 - 2199595 + G 73 -4.7 -4.67353 | overlap 2199579 2199589 TGATCTTCGTTTTGG AGCCGGT ATTC GCCGGCG TTTTTGGCTGGCTCC Dhaf_2039 2198848 - 2199753 + | protein of unknown function DUF6 transmembrane Dhaf_2040 2200117 - 2200641 + | isochorismatase hydrolase Dhaf_2041 2202092 - 2200623 - | hypothetical protein TERM 2996 2200773 - 2200785 + g 71 -9.1 -3.48276 | opp_overlap 2200772 2200773 2200775 CCCTCTCCCGGAAAT GACCC AGA GGGTC TTATATCCCCGGGGG Dhaf_2042 2203288 - 2202098 - | AAA ATPase TERM 2997 2202979 - 2202996 + g 74 -2.6 -5.13722 | opp_overlap 2202982 CCCGCAGTTTATGAT GAACGG CATAGA CCGTGC TTTTCTTTTCCTGGA Dhaf_2043 2204103 - 2203303 - | hypothetical protein Dhaf_2044 2204394 - 2205059 + | transcriptional regulator, GntR family TERM 2998 2205085 - 2205129 + T 100 -16.8 -4.42653 | gap 1 AGAGGGAAACCTTTA GAGGCTTATTCTAAGATTGCC GTCT GGT-ATCTTGGAATAAGCCTC TTTTATCCGTCAGAT Dhaf_2045 2206077 - 2205448 - | hypothetical protein Dhaf_2046 2207800 - 2206085 - | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 2999 2207966 - 2208015 + H 100 -12.5 -4.08692 | TCATCACGCCCCCTT TCCGTCTCGTTAAATATGC AAAACCTGTGCC ACATATTTAACGAGACGGA TTTTGAGGCGGATTC TERM 3000 2208679 - 2208669 - g 71 -4 -4.7373 | CTATGTCAGGAAAAA TTTC GGA GAAA TACACGGGGCCTCGG TERM 3001 2209005 - 2208961 - g 100 -11 -5.75599 | opp_overlap 2208966, overlap 2208963 GAAATCAGAAAAAAA CA-GAATACCGGGCAGGGAC GGAAAAA ATCCCTGCC-GGTATTCATG AAAGCCCAAAATGAT TERM 3002 2209002 - 2208963 - g 100 -13.8 -4.48967 | gap 1, opp_overlap 2208966, overlap 2208961 AATCAGAAAAAAACA GAATACCGGGCAGGGAC GGAAAAA ATCCCTGCC-GGTATTC ATGAAAGCCCAAAAT Dhaf_2047 2208193 - 2209998 + | sigma54 specific transcriptional regulator, Fis family TERM 3003 2210093 - 2210132 + F 100 -10.2 -5.44119 | gap 1 AGGGAAACCTTTAGA GGCTTATGCTAAGATTGCC GGC GGTA-TCTTGGAATAAGCC TTTTTTTGGAATAAG TERM 3004 2210279 - 2210226 - f 100 -14.5 -4.12037 | opp_overlap 2210230 2210232 2210234, overlap 2210222 2210220 2210219 2210217 2210227 GACAAAGAGCATAAA CCAATATATCATATATAATATATTA TATA TGATATATTATATATGATATATTGC GATGAACGATATCCC TERM 3005 2210278 - 2210227 - f 100 -18 -3.06138 | opp_overlap 2210230 2210232 2210234, overlap 2210222 2210220 2210219 2210217 2210226 ACAAAGAGCATAAAC CAATATATCATATATAATATATTA TATA TGATATATTATATATGATATATTG CGATGAACGATATCC TERM 3006 2210230 - 2210261 + F 93 -12 -3.63762 | opp_overlap 2210222 2210220 2210219 2210217 2210227 2210226, overlap 2210232 2210234 AAGAGCATAAACCAA TATATCATATATAA TATA TTATATATGATATA TTATATATGATATAT TERM 3007 2210232 - 2210273 + F 100 -14.3 -3.05844 | opp_overlap 2210222 2210220 2210219 2210217 2210227 2210226, overlap 2210230 2210234 GAGCATAAACCAATA TATCATATATAATATATTA TATA TGATATATTATATATGATA TATTGCGATGAACGA TERM 3008 2210234 - 2210271 + F 93 -12.5 -3.08813 | opp_overlap 2210222 2210220 2210219 2210217 2210227 2210226, overlap 2210230 2210232 GCATAAACCAATATA TCATATATAATATATTA TATA TGATATATTATATATGA TATATTGCGATGAAC Dhaf_2048 2210495 - 2210914 + | DoxX family protein Dhaf_2049 2210942 - 2212399 + | sodium/sulphate symporter TERM 3009 2212483 - 2212448 - f 72 -6.1 -4.36914 | opp_overlap 2212454, overlap 2212450 TCTGTTCTTATAAAA CTTCAAGGTAATCGC TTTTGT GCGGTTACCTTGCTG CATATAAAAGAGACA Dhaf_2050 2212678 - 2212974 + | SAF domain protein Dhaf_2051 2212964 - 2214118 + | Altronate dehydratase TERM 3010 2214174 - 2214143 - f 100 -12.2 -4.27316 | overlap 2214148 CCCCTGAAGCGAAAA GTAAAGGGTGCGGG TAGT CCCGCACCCTGCTC CGGGGCCTTCATACC TERM 3011 2214169 - 2214148 - f 100 -17.3 -4.23528 | overlap 2214143 GAAGCGAAAAGTAAA GGGTGCGGG TAGT CCCGCACCC TGCTCCGGGGCCTTC Dhaf_2052 2214296 - 2215054 + | Creatininase Dhaf_2053 2215073 - 2215429 + | Cupin 2 conserved barrel domain protein TERM 3012 2215765 - 2215755 - g 77 -8.2 -4.20084 | overlap 2215756 AGCATTGACTTAAAA GCGG CTG CCGC CAGGGGAATTACCGT TERM 3013 2216174 - 2216164 - g 73 -3.2 -5.00616 | GTTTGCTGGAAAAAA TGCG CCC CACA GCCTTTCTCATCAAT TERM 3014 2216253 - 2216263 + G 71 -8.2 -3.78962 | opp_overlap 2216253 2216251 2216249 AAGGAAAAAAGGATA GCGG GAG CCGC TTTGGATGTCTTTGC Dhaf_2054 2215488 - 2216450 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 3015 2216469 - 2216459 - f 74 -6.8 -4.37737 | GAACTAAAAAGCAAA GGAG GGA CTCC GGTGAACGGAAAGTG TERM 3016 2217302 - 2217280 - g 77 -10.6 -3.53091 | AGCTCTGGGCTTAAA GCTGCTCTAT GGC ATAGAGCTGC CCAAATTCAACTTCC Dhaf_2055 2216471 - 2217685 + | 2-isopropylmalate synthase TERM 3017 2218953 - 2218928 - g 74 -3.1 -5.055 | opp_overlap 2218940, overlap 2218929 2218940 2218942 GGAAGGGGTAAAAAA GGCTGCCGC AAAGATCG GCGGCGGCT CCGAGCATTATGCCA Dhaf_2056 2217705 - 2219507 + | Aldehyde ferredoxin oxidoreductase Dhaf_2057 2219540 - 2221210 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein Dhaf_2058 2221276 - 2221479 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2059 2221504 - 2222997 + | protein of unknown function DUF112 transmembrane Dhaf_2060 2222997 - 2223557 + | hypothetical protein Dhaf_2061 2223687 - 2224733 + | hypothetical protein TERM 3018 2224911 - 2224944 + G 71 -8.2 -3.67878 | opp_overlap 2224902, overlap 2224902 GAAACATGGTTCCAG GGATCGGTACCATC ATTGTC GATGTTACCAATCC TTCTCTTCCCCTGGT Dhaf_2062 2224808 - 2225929 + | LVIVD repeat protein Dhaf_2063 2225958 - 2226476 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3019 2226494 - 2226484 - f 71 -4 -4.79373 | opp_overlap 2226484 TAAGATAAGACAAAA TTCA ATG TGAA ATTTAAGGAGGTCCT TERM 3020 2227033 - 2227002 - g 77 -4.3 -5.0538 | gap 1, overlap 2227007 CTGGAGCTGAAAAAA GGGAAC-TGGCGGG GAGAG CCCGCCACGGCACC CGGCGGTCCCCTCAC TERM 3021 2227457 - 2227437 - g 85 -11.9 -3.68222 | GTGGAAGTGGAAGAA GTTGCGGAC GTT ATCCGCAAC GGGGGAGAGACCGAG Dhaf_2064 2226513 - 2227574 + | oxidoreductase domain protein TERM 3022 2227617 - 2227592 - f 100 -14.1 -3.20382 | opp_overlap 2227592 2227595, overlap 2227596 CCGGACACGGACCAA GAAAGGGAACG GCTT CGTTCCCCTTC TTACATATAAACGCA TERM 3023 2227592 - 2227617 + F 86 -11.9 -3.12351 | opp_overlap 2227592 2227596, overlap 2227595 CCGGACACGGACCAA GAAAGGGAACG GCTT CGTTCCCCTTC TTACATATAAACGCA TERM 3024 2227595 - 2227614 + F 70 -7.8 -3.70773 | opp_overlap 2227592 2227596, overlap 2227592 GACACGGACCAAGAA AGGGAACG GCTT CGTTCCCC TTCTTACATATAAAC TERM 3025 2227613 - 2227596 - f 100 -11.3 -4.26202 | opp_overlap 2227595 2227592, overlap 2227592 ACACGGACCAAGAAA GGGAACG GCTT CGTTCCC CTTCTTACATATAAA Dhaf_2065 2227718 - 2228890 + | Succinate--CoA ligase (ADP-forming) Dhaf_2066 2228871 - 2229752 + | succinyl-CoA synthetase, alpha subunit TERM 3026 2230459 - 2230449 - g 71 -6.8 -4.30885 | overlap 2230440 AAAAGACATCGAAAA CGCT GTG AGCG CTGCCCTGTCGGAAA Dhaf_2067 2229778 - 2230536 + | GntR domain protein TERM 3027 2230539 - 2230581 + F 100 -12.2 -4.73432 | opp_overlap 2230539 2230538 2230541 GCCTTTAAGGTAAAG GAGAGTACCGCAGGACTA TTGGATC TAGTTTTGCCGTACTCTC TTTGTTTCTATTTAC Dhaf_2068 2230675 - 2231790 + | alanine dehydrogenase TERM 3028 2231915 - 2231872 - T 78 -6 -4.89477 | gap 1, opp_overlap 2231873, overlap 2231867 2231873 CCTGCAATAAGAAAA GGACCTGTGGAAA-CCCTTGC GGA GAAGGGGCTTTCTACAGGTCT TTTTGAGTTTGTTTC TERM 3029 2231914 - 2231873 - T 76 -9.5 -3.52963 | gap 1, opp_overlap 2231873, overlap 2231872 2231867 CTGCAATAAGAAAAG GACCTGTGGAAA-CCCTTGC GGA GAAGGGGCTTTCTACAGGTC TTTTTGAGTTTGTTT TERM 3030 2231873 - 2231914 + T 100 -13.9 -4.88295 | gap 1, opp_overlap 2231873 2231872 2231867 CTGCAATAAGAAAAG GACCTGTGGAAA-CCCTTGC GGA GAAGGGGCTTTCTACAGGTC TTTTTGAGTTTGTTT Dhaf_2069 2233000 - 2231954 - | methyltransferase MtaA/CmuA family TERM 3031 2232273 - 2232327 + g 93 -11.4 -4.4715 | opp_overlap 2232273 2232290 2232295 AAACGATCCATGACA TTGCCGCAGATATGCAAGATAATCGG TCC CCGGTTTTCAAGTTTAGCTGCGGCAA TTTTATGGATTGGCA Dhaf_2070 2234461 - 2233052 - | transcriptional regulator, CdaR TERM 3032 2234415 - 2234429 + g 80 -8.6 -4.42464 | GCAATTATTTTATCT TGTGCA ATA TGCACA TTTATTTCGAAAATT Dhaf_2071 2234571 - 2235587 + | aminoglycoside phosphotransferase Dhaf_2072 2235600 - 2236913 + | Phosphopyruvate hydratase Dhaf_2073 2236934 - 2237710 + | HpcH/HpaI aldolase TERM 3033 2237728 - 2237687 - f 72 -7.3 -3.93057 | gap 1 GTGAAAACGATTAAA GAGCTT-CCTGGTTTCAACC CCT GAGTGAAGCCTGGAAAGCTC AAAATCTAAGGGAAA Dhaf_2074 2237748 - 2238257 + | hypothetical protein Dhaf_2075 2238273 - 2239766 + | protein of unknown function DUF112 transmembrane TERM 3034 2239773 - 2239761 - f 90 -4.1 -5.72622 | TGTATAAAGAAAAAA GCTTA GAG CAAGC AATGAAGGAGCGATA TERM 3035 2240371 - 2240385 + G 80 -8.6 -4.3587 | AAGTCGATACCGTGT TCAGTG TCT CACTGA TTTCTATTCTTGATG Dhaf_2076 2239791 - 2240513 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2077 2240516 - 2241154 + | hypothetical protein Dhaf_2078 2241191 - 2242216 + | hypothetical protein TERM 3036 2242260 - 2242279 + F 71 -8.5 -3.56836 | opp_overlap 2242260 TTTTACAACCCAAAA GGCGTCC TTCGCT GGGCGCC TTTCCACACTGGTTT TERM 3037 2242279 - 2242260 - f 72 -6.3 -4.3208 | opp_overlap 2242260 TTTTACAACCCAAAA GGCGTCC TTCGCT GGGCGCC TTTCCACACTGGTTT TERM 3038 2243234 - 2243209 - g 87 -12.6 -3.39895 | overlap 2243223 2243225 TGGGCTACCAAGGAA GCCAGGGCCA GAATTA TGGCCCTGAC CATAGAGAACCTTAA Dhaf_2079 2242336 - 2243295 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 3039 2243306 - 2243338 + F 100 -16.4 -3.27022 | opp_overlap 2243299 2243298 CGTAGAATTTTGCAG GCCTCACACCGG AAAGAAGAA CCGGTGTGAGGC TTGATGTAAAATGAG Dhaf_2080 2243362 - 2244411 + | membrane protein AbrB duplication Dhaf_2081 2245102 - 2244374 - | Methyltransferase type 12 TERM 3040 2245246 - 2245272 + H 75 -2.3 -5.28281 | opp_overlap 2245224 AAATTAAATTTGCAA CTCACCG GAGGGAGAAAGAA CGGTGAG TTTTCTTTATTTTAT TERM 3041 2246607 - 2246593 - g 85 -5.6 -5.18561 | GAAATATCGAAAAAA CAGTGG AAA CCTCTG CAGAAATGGTTGCCA Dhaf_2082 2245485 - 2247191 + | methyl-accepting chemotaxis sensory transducer TERM 3042 2247234 - 2247224 - f 88 -6.8 -5.12707 | TCAAAGTGGAAAAAA GTGC AGT GCAC ATTGACAAATCTGTC TERM 3043 2247250 - 2247305 + F 100 -12.2 -4.05033 | opp_overlap 2247255 2247269 ATTGACAAATCTGTC TTAAACTCATACTATATAATGGTCCA TATC TGGACTATTATATAGTATGAGGAGGA TTTCTATGCAATGGA TERM 3044 2247300 - 2247255 - f 100 -20.9 -3.54935 | opp_overlap 2247250, overlap 2247269 CAAATCTGTCTTAAA CTCATACTATATAATGGTCCA TATC TGGACTATTATATAGTATGAG GAGGATTTCTATGCA Dhaf_2083 2247311 - 2247634 + | small multidrug resistance protein Dhaf_2084 2247652 - 2248143 + | transcriptional regulator, MarR family TERM 3045 2248159 - 2248185 + F 100 -8.8 -5.70829 | AAGAGAACAGGTTAA CTGCTTGGAA CAGCTCA TTCCAAGCGG TTTTTTTATAGTGTT TERM 3046 2248599 - 2248581 - g 71 -8.8 -3.65351 | TGACCGTGATTGAAA GCAAACCG GAA CGGGTTGC CACCATTTCCTGGGG Dhaf_2085 2248379 - 2249443 + | periplasmic binding protein Dhaf_2086 2249440 - 2250438 + | transport system permease protein Dhaf_2087 2250435 - 2251484 + | transport system permease protein Dhaf_2088 2251481 - 2252284 + | ABC transporter related TERM 3047 2252354 - 2252329 - T 91 -7.7 -4.80167 | gap 1, opp_overlap 2252329, overlap 2252324 TATCAAAAAGCAAAA TCCCTCAAAACA CTG CGTT-TGAGGGA TTTTCTGCTCCAAAT TERM 3048 2252329 - 2252354 + T 82 -7.7 -4.4648 | opp_overlap 2252329 2252324 TATCAAAAAGCAAAA TCCCTCAAA ACACTGCG TTTGAGGGA TTTTCTGCTCCAAAT Dhaf_2089 2252582 - 2252385 - | hypothetical protein TERM 3049 2253879 - 2253889 + G 71 -6.8 -4.15366 | CAAAGGGCCTTGCCG GCTG GAG CAGC TTTCCTTGTTTGAGT Dhaf_2091 2253019 - 2253906 + | Radical SAM domain protein Dhaf_2092 2254438 - 2253911 - | GCN5-related N-acetyltransferase Dhaf_2093 2255250 - 2254513 - | hypothetical protein TERM 3050 2255665 - 2255634 - g 72 -5.8 -4.35017 | overlap 2255638 GAAAAAGCCAAGAAA CAAATCCCGGAAGC CTCC GATTCCGCGAATTG GCCAAAGCGGGAGGG TERM 3051 2255661 - 2255638 - g 75 -5.2 -4.70117 | overlap 2255634 AAGCCAAGAAACAAA TCCCGGAAGC CTCC GATTCCGCGA ATTGGCCAAAGCGGG Dhaf_2094 2255454 - 2255861 + | protein of unknown function UPF0150 TERM 3052 2255886 - 2255870 - T 72 -9.4 -3.07227 | overlap 2255863 CGATTAAAGGAGAGA GGGGAG TATAG CTCCCC ACAGTCCCCCTTGCC TERM 3053 2255903 - 2255924 + T 79 -11.7 -2.52464 | CAGTCCCCCTTGCCA GATTGGCAA GCGC TTGCCAATC TGAGTTACACACAGA Dhaf_2095 2257357 - 2256017 - | hypothetical protein TERM 3054 2256451 - 2256472 + g 80 -7.2 -4.52589 | opp_overlap 2256467, overlap 2256452 ACTCGCCCATGCGCA CGCCGCTG ATAAAC CAGCGGCC TTTTATCTGCCGCAA TERM 3055 2256452 - 2256471 + g 78 -10.7 -3.31232 | opp_overlap 2256467, overlap 2256451 CTCGCCCATGCGCAC GCCGCTG ATAAAC CAGCGGC CTTTTATCTGCCGCA TERM 3056 2256649 - 2256637 - G 71 -9.1 -3.53811 | opp_overlap 2256642 GCCAGGGGCTGGAAA CCAGG CGG CCTGG AGCCGTTTGCGGAGC TERM 3057 2256873 - 2256896 + g 73 -5.2 -4.53163 | overlap 2256874 2256886 AACCGGATCACTGTG AGGTTCTCCG TATC CTGAGAACCG TTTTCTGGTATGTAC TERM 3058 2257473 - 2257444 - R 100 -15.2 -4.10925 | opp_overlap 2257448 2257451 2257472, overlap 2257448 ACAGATCGCCCAAAA GAAATAACCGCC CCAGAT GGCGGTTATTTC AGATCTAATCTGCTG TERM 3059 2257448 - 2257469 + r 82 -10.2 -3.64866 | opp_overlap 2257448 2257444, overlap 2257451 ATCGCCCAAAAGAAA TAACCGCC CCAGAT GGCGGTTA TTTCAGATCTAATCT TERM 3060 2257469 - 2257448 - R 100 -10.2 -4.65263 | opp_overlap 2257448 2257451, overlap 2257444 ATCGCCCAAAAGAAA TAACCGCC CCAGAT GGCGGTTA TTTCAGATCTAATCT TERM 3061 2257451 - 2257466 + r 72 -7.5 -3.95378 | opp_overlap 2257448 2257444, overlap 2257448 GCCCAAAAGAAATAA CCGCC CCAGAT GGCGG TTATTTCAGATCTAA Dhaf_2096 2259686 - 2257494 - | catalase/peroxidase HPI TERM 3062 2257679 - 2257695 + g 81 -7.9 -4.65916 | CTGTGGCCCGGTCCC GGCCCTC ATA GAGAGCC TTTTCTTCCGATACG TERM 3063 2258043 - 2258027 - G 75 -10.1 -3.27525 | overlap 2258022 2258035 CCGGCGTAAAGGGAA CGACCAG AGT CTGGCCG GCGTTCCTGGCAGCC TERM 3064 2258666 - 2258683 + g 76 -8.3 -4.08767 | overlap 2258675 CAGTGGGAACCCACT GCCACGC TCCG GCGGGGC TTTTCACCAGGTCCC TERM 3065 2259655 - 2259671 + g 70 -2.1 -4.88795 | GGGGTGTGCTGGGTA TGGCCGG TTA CGGGGCA TTTCTTTTCTTCCAT TERM 3066 2259757 - 2259724 - H 75 -5.5 -4.83615 | opp_overlap 2259724 2259723, overlap 2259725 GATTTTTGAGAAAAA GTGCATTAATCTT TAAGGTGG AAGATTAATGCAA ATTATAATCATTATA TERM 3067 2259756 - 2259725 - H 73 -9 -3.49687 | opp_overlap 2259724 2259723, overlap 2259724 ATTTTTGAGAAAAAG TGCATTAATCTT TAAGGTGG AAGATTAATGCA AATTATAATCATTAT TERM 3068 2260342 - 2260320 - g 81 -7.6 -4.65895 | overlap 2260321 GGGTTCACCCAAAAA GCCACCTCGC TAT ACGAGGCGGA GGGATTTGATGCCGG TERM 3069 2260341 - 2260321 - g 78 -11.1 -3.39216 | overlap 2260320 GGTTCACCCAAAAAG CCACCTCGC TAT ACGAGGCGG AGGGATTTGATGCCG TERM 3070 2260859 - 2260826 - g 83 -8.9 -4.46112 | overlap 2260842 TCTTACCCAAATAAA CCTGGAAATAACCAA GCTC CTGGGCATCTCCAGG GAAATTGCCTATGCT Dhaf_2097 2260077 - 2261162 + | transcriptional regulator, XRE family TERM 3071 2261267 - 2261223 - f 100 -19.8 -4.06419 | TTTCTTGACAAAGAA GTCTATATTCTATAGACTCA AAATA TAAGTCTATAGAATATAGAC CGAGGAGGCTTTGTC Dhaf_2098 2261283 - 2261645 + | transcriptional repressor, CopY family TERM 3072 2263269 - 2263290 + G 71 -10.1 -2.80732 | overlap 2263268 TTAATGACCTCTCCA TCCTGGCCG GCGA CAGCCAGGA GTTTGCCGTTGCTGT TERM 3073 2263457 - 2263476 + G 73 -10 -3.28924 | gap 1, opp_overlap 2263454 ATCGGTACAGGAGGA GGCGGGCAG GGG CT-CCCGCC TTATCCCGCGGAGTA Dhaf_2099 2261648 - 2263492 + | peptidase M56 BlaR1 Dhaf_2100 2264363 - 2263509 - | transcriptional regulator, MerR family TERM 3074 2264158 - 2264168 + g 77 -6.8 -4.64844 | TCGAAGTGGGGGTTA GCCA TGA TGGC TTTTATCTCTCTCAG Dhaf_2101 2265373 - 2264612 - | short-chain dehydrogenase/reductase SDR Dhaf_2102 2265590 - 2266243 + | transcriptional regulator, AraC family Dhaf_2103 2266259 - 2266777 + | methylated-DNA/protein-cysteine methyltransferase TERM 3075 2266819 - 2266833 + F 74 -4.3 -5.00616 | CTATGCAATTTAAGC TGTCA TCTCT TGACA TTTTTTCGAAAAAAG TERM 3076 2266852 - 2266869 + F 73 -3.5 -5.055 | opp_overlap 2266855 TTTCGAAAAAAGAAT TAACTTA AAGA TAAGTTG TTTTTTAGGGATTCA TERM 3077 2267353 - 2267372 + G 76 -11.4 -2.80878 | overlap 2267355 2267355 GTCTTTGTTTCCATA CTGGTGGC GGTA GCCGCCAG CCTTTTGTTTTATAA TERM 3078 2267355 - 2267374 + G 100 -10 -5.18371 | gap 1, overlap 2267353 2267355 CTTTGTTTCCATACT GG-TGGCGG TAG CCGCCAGCC TTTTGTTTTATAAGC TERM 3079 2267355 - 2267373 + G 79 -10.2 -3.69938 | overlap 2267353 2267355 CTTTGTTTCCATACT GGTGGCGG TAG CCGCCAGC CTTTTGTTTTATAAG TERM 3080 2267605 - 2267619 + G 73 -3.4 -4.98911 | overlap 2267607 ATCAACAATTCCTTT CTGCGG GCG CTGCTG TTTATTTTTCTGATC TERM 3081 2267876 - 2267859 - g 81 -3.4 -5.51353 | GAAAAAGAACAAAAA TCAGCG CCGGAT CGCTAA GTTTTCTCTGTTCCC Dhaf_2104 2266906 - 2269062 + | PTS system, lactose/cellobiose family IIC subunit TERM 3082 2269105 - 2269069 - T 100 -17.4 -4.8543 | opp_overlap 2269069 CAAGGCTGACAAAAA GCGCCTTTATCCCACC ATAAA AGTGGGATAAGGGCGC TTTTGAGTTAAATAA TERM 3083 2269069 - 2269105 + T 100 -18.9 -4.28774 | opp_overlap 2269069 CAAGGCTGACAAAAA GCGCCTTTATCCCAC CATAAAA GTGGGATAAGGGCGC TTTTGAGTTAAATAA Dhaf_2105 2270606 - 2269113 - | Ppx/GppA phosphatase Dhaf_2106 2270845 - 2272377 + | Ppx/GppA phosphatase Dhaf_2107 2272374 - 2274521 + | Polyphosphate kinase Dhaf_2108 2274558 - 2275028 + | phosphohistidine phosphatase, SixA TERM 3084 2275079 - 2275055 - T 91 -6.4 -5.49569 | gap 1, opp_overlap 2275056, overlap 2275056 GATTAATAGAAAAAA CCCGGCTCGAC GAAA GTTGAG-CGGG TTTTTTTCAGGTTGA TERM 3085 2275056 - 2275079 + T 100 -8.8 -5.47399 | opp_overlap 2275055 2275056 ATTAATAGAAAAAAC CCGGCTCGAC GAAA GTTGAGCGGG TTTTTTTCAGGTTGA Dhaf_2109 2275942 - 2275103 - | histidinol phosphate phosphatase HisJ family TERM 3086 2275218 - 2275233 + g 71 -9 -3.51411 | overlap 2275213 2275214 GCCTTTTTCAGGCGT TCCAGG CCTT CCTGGA TTCCTTTGCCCACAT Dhaf_2110 2277677 - 2276082 - | hypothetical protein TERM 3087 2276272 - 2276251 - G 73 -2.2 -5.0916 | gap 1, overlap 2276252 2276255 TCGTTAATAGAAAAA CGCACCGGC TCAGT ACCGGC-CG GTCCTAAGATCTCGA TERM 3088 2276556 - 2276576 + g 78 -6.1 -4.72272 | overlap 2276557 GTAGATTTTGATATT GGTCTGGAA AGC TTCCAGGCA TTTTTGGTGGAAAGC TERM 3089 2276557 - 2276575 + g 73 -9.6 -3.43042 | overlap 2276556 TAGATTTTGATATTG GTCTGGAA AGC TTCCAGGC ATTTTTGGTGGAAAG TERM 3090 2276714 - 2276697 - G 71 -2.6 -4.86385 | opp_overlap 2276697 ATTCTTAAAAAGAAA GCGGTT GCCGAT AGCCGC TTCGCTTTCCAGCAG TERM 3091 2276942 - 2276923 - G 76 -7.2 -4.35042 | gap 1, overlap 2276920 GGCACGATAAAATAA TCCTTG-CC AAG GGTCAAGGA ATCGTAGCTTTTCAG TERM 3092 2277058 - 2277013 - G 73 -8.3 -3.83771 | opp_overlap 2277013 AAGAAATTGAGCAAA TCCATCATCCGCTGCAGATCA TGGG TGATTCGCAGCAGGTAGTGGA TCTCGCAGCCCTGAG TERM 3093 2277161 - 2277138 - G 88 -2.5 -5.76633 | opp_overlap 2277138 2277136 GGACATATAAAAAAA TACATCATT GAAATA AGTGATGTA TATTGCTTTTCTTCT TERM 3094 2277300 - 2277289 - G 100 -7.2 -5.52986 | opp_overlap 2277288 2277289 ACTTCATTAAAAAAA GGCG GATT CGCC ATTGATTTTTTGTAT TERM 3095 2278060 - 2278072 + G 71 -10.5 -2.91593 | overlap 2278052 2278059 TGCCCAGCACGGCTA CCGGG TTT CCCGG CTTTGTGAACGCATG Dhaf_2111 2277926 - 2278531 + | metal dependent phosphohydrolase TERM 3096 2278984 - 2278971 - g 71 -6.7 -4.28488 | ACGGAAAGAGATAAA GCCAT CGAT ATGGC AACAGCGGGAAACCA TERM 3097 2279152 - 2279178 + G 72 -5.8 -4.36595 | overlap 2279153 2279172 TGACCAGTAAAGTTA TGGTGGGCATCA CGT TGGTGGCCATCG TTTTGGCTTTGGGTA Dhaf_2112 2278575 - 2280290 + | methyl-accepting chemotaxis sensory transducer TERM 3098 2280362 - 2280410 + F 74 -4 -5.08011 | gap 1, opp_overlap 2280363 2280364, overlap 2280364 TTAAGTAGCATTAAA AGGCGTCTTT-AGGTTTCAATTG AATT CAATTGATTCTTTAAAGACGCTG TTTTTTGCACCTTTT TERM 3099 2280364 - 2280408 + F 83 -8.8 -4.15235 | gap 1, opp_overlap 2280363 2280364, overlap 2280362 AAGTAGCATTAAAAG GCGTCTTT-AGGTTTCAATTG AATT CAATTGATTCTTTAAAGACGC TGTTTTTTGCACCTT Dhaf_2113 2280568 - 2281140 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 3100 2281492 - 2281467 - g 78 -6.1 -4.72846 | TTATATACGGAAAAA GCCTTGGACAT CAAT ATGGTCAAGGC GGATAATGGCATTGA Dhaf_2114 2281143 - 2282294 + | hypothetical protein TERM 3101 2282366 - 2282402 + T 100 -19.6 -4.78149 | opp_overlap 2282366 AGTCTGATCGCAAAA GAGGAAGACCTGCTCT GTTTA AGGGCGGGTCTTCCTC TTTTTACATTGTCAG TERM 3102 2282402 - 2282366 - T 100 -15.2 -4.13945 | opp_overlap 2282366 AGTCTGATCGCAAAA GAGGAAGACCTGCTCT GTTTA AGGGCGGGTCTTCCTC TTTTTACATTGTCAG Dhaf_2115 2283521 - 2282517 - | secretion protein HlyD family protein TERM 3103 2283659 - 2283629 - R 100 -14.1 -3.01924 | CACTTGTTCTCAATA GCGGGTTGGAAAC GTCCT GTTTCCAACCCGA CTCCGCTGCGTGCTT Dhaf_2116 2284980 - 2283964 - | ABC-2 type transporter TERM 3104 2284051 - 2284071 + g 82 -10.3 -3.80461 | opp_overlap 2284043 CCCTAAATCCCAGGC GATGGCGGC AAA GCCGCCGCC TTTGATCATCACTTC Dhaf_2117 2285704 - 2284970 - | ABC transporter related TERM 3105 2285424 - 2285408 - G 77 -4.3 -5.01732 | overlap 2285410 AATGGCCCCAAAAAA CTGCAGA TTT TCCGCTG CGGTTAAGGTACCAT Dhaf_2118 2285942 - 2286547 + | transcriptional regulator, TetR family TERM 3106 2286556 - 2286593 + T 100 -15 -3.26433 | gap 1, opp_overlap 2286556 2286560, overlap 2286560 CTCTTAATAGTAAAA CAAACGGCGGACCGG ACTGTTGAA CCGG-CCGCCGTTTG TTAATGGTCTGCTTA TERM 3107 2286593 - 2286556 - T 100 -15 -4.4261 | gap 1, opp_overlap 2286556 2286560, overlap 2286560 CTCTTAATAGTAAAA CAAACGGCGGACCGG ACTGTTGAA CCGG-CCGCCGTTTG TTAATGGTCTGCTTA TERM 3108 2286560 - 2286589 + T 93 -10 -4.28111 | gap 1, opp_overlap 2286556 2286560, overlap 2286556 TAATAGTAAAACAAA CGGCGGACCGG ACTGTTGAA CCGG-CCGCCG TTTGTTAATGGTCTG TERM 3109 2286589 - 2286560 - T 100 -10 -4.77698 | gap 1, opp_overlap 2286560 2286556, overlap 2286556 TAATAGTAAAACAAA CGGCGGACCGG ACTGTTGAA CCGG-CCGCCG TTTGTTAATGGTCTG Dhaf_2119 2287041 - 2286646 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Dhaf_2120 2287172 - 2287507 + | transcriptional regulator, HxlR family TERM 3110 2287784 - 2287794 + G 80 -2.6 -5.42265 | CATGTTGTCCATTCC TATT TTG AATA TTTTTTATGCTTTGC Dhaf_2121 2287731 - 2288453 + | Ser/Thr and Tyr protein phosphatase (dual specificity)# TERM 3111 2288453 - 2288442 - f 71 -4.4 -4.86385 | opp_overlap 2288447, overlap 2288443 ATGGTGAAAAAGAAA TCAG AGGT CTGA GGCCTTTGAAAATAC TERM 3112 2288500 - 2288466 - f 93 -10.8 -4.08216 | opp_overlap 2288465 2288471 2288474, overlap 2288474 2288476 TGAGGCCTTTGAAAA TACAAAAATCCCCGCT GTT AGCGGGCATGCTTGTA ATTCCATCCGGATAC TERM 3113 2288492 - 2288474 - f 100 -8.8 -5.28983 | opp_overlap 2288474 2288471 2288465, overlap 2288466 2288476 TTGAAAATACAAAAA TCCCCGCT GTT AGCGGGCA TGCTTGTAATTCCAT TERM 3114 2288490 - 2288476 - f 81 -11.4 -2.83831 | opp_overlap 2288474 2288471 2288465, overlap 2288474 2288466 GAAAATACAAAAATC CCCGCT GTT AGCGGG CATGCTTGTAATTCC TERM 3115 2288611 - 2288642 + F 79 -6.6 -4.66833 | gap 1 GACAGAATGAAGCAG GCGCATGTGTAGGAT AAA AACCT-TGCATGCGC TTTTTGACATTAGGA Dhaf_2122 2288668 - 2289933 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2123 2289986 - 2290525 + | GCN5-related N-acetyltransferase TERM 3116 2290570 - 2290602 + T 100 -14.4 -2.61602 | gap 1, opp_overlap 2290570, overlap 2290567 2290566 2290574 AGCATAAGACTTAAA GAGACCATC-CAACA ATAC TGTTGAGATGGTCTC TAACTTATACATTGA TERM 3117 2290602 - 2290570 - T 100 -14.4 -3.79473 | gap 1, opp_overlap 2290570 2290567 2290566 2290574 AGCATAAGACTTAAA GAGACCATC-CAACA ATAC TGTTGAGATGGTCTC TAACTTATACATTGA Dhaf_2124 2291092 - 2290607 - | transcriptional regulator, CarD family TERM 3118 2291660 - 2291631 - g 85 -11.3 -3.79747 | CCACCGATGATGAAA CCTGGGCCCCGGC TATC GCCCATGCCCAGG CTGTCGACCGCAATG TERM 3119 2292196 - 2292226 + G 75 -7.6 -4.24285 | gap 1, opp_overlap 2292200, overlap 2292196 2292198 TGCGGAGGCAGTGGA G-AGAGCTTGCCG GAGATG CGGCAAGCACTAC TTTATTCCCTGTCTG TERM 3120 2292198 - 2292223 + G 73 -10.4 -3.12104 | opp_overlap 2292200, overlap 2292196 2292196 CGGAGGCAGTGGAGA GAGCTTGCCG GAGATG CGGCAAGCAC TACTTTATTCCCTGT TERM 3121 2292221 - 2292200 - g 76 -11.6 -2.89881 | opp_overlap 2292198 2292196 2292196 GAGGCAGTGGAGAGA GCTTGCCG GAGATG CGGCAAGC ACTACTTTATTCCCT Dhaf_2125 2291345 - 2292328 + | Uroporphyrinogen-III decarboxylase-like protein TERM 3122 2292398 - 2292341 - T 93 -12.3 -3.02144 | gap 1, opp_overlap 2292357, overlap 2292357 TGATCCCGCTGAATA GAA-ATACCATAAAAAATCGCCTTCTGC CGA GCATGAGGCGATTTTTTATGGTGCGCTC GGCATGGGTGGCAAC TERM 3123 2292381 - 2292357 - T 100 -8.5 -5.38321 | opp_overlap 2292357, overlap 2292341 AAATACCATAAAAAA TCGCCTTCTGC CGA GCATGAGGCGA TTTTTTATGGTGCGC TERM 3124 2292357 - 2292381 + T 100 -10.7 -5.31275 | opp_overlap 2292357 2292341 AAATACCATAAAAAA TCGCCTTCTGC CGA GCATGAGGCGA TTTTTTATGGTGCGC Dhaf_2126 2293441 - 2292464 - | transcriptional regulator, AraC family TERM 3125 2293366 - 2293377 + g 93 -7.2 -5.40072 | opp_overlap 2293364, overlap 2293364 TGTAGCAGATATAGC CGGC TCCC GCCG TTTTTTTCAAGCCGA TERM 3126 2293670 - 2293654 - g 100 -5.7 -6.08342 | opp_overlap 2293654 CAACAAACAAAAAAA CCGGCGA TAT CCGCTGG TTATTGCAGCTGGCT TERM 3127 2295112 - 2295136 + G 76 -9.9 -3.64716 | overlap 2295110 TTTCGGGCGGGGAGC GCCAGCGCG TCGTCAT CGCGCGGGC TATTTTGAAGAATGC TERM 3128 2295226 - 2295211 - g 73 -4.7 -4.77629 | AAAATGAACAGAAAA TCCAG CTGGCT CTGGA AAAGCTGATGAAGCA TERM 3129 2295306 - 2295287 - g 71 -4.2 -4.77036 | overlap 2295298 2295301 GTCCACCATCAAAAA CGCCGATA AGAT CATCGTCG TGGACGAGGGGCGGA Dhaf_2127 2293629 - 2295422 + | ABC transporter related TERM 3130 2295916 - 2295927 + G 70 -2.2 -4.8543 | TTTTCGATTGGCGCA TGGC CCTG GCTA TTTTTATCAGCGTTC TERM 3131 2297080 - 2297094 + G 78 -11.4 -3.01712 | GGATCGCCGAGCAGG GCTCCG GGC CGGAGC TCTTGCGGGCAGGGG Dhaf_2128 2295435 - 2297171 + | ABC transporter related Dhaf_2129 2297216 - 2298469 + | Alpha/beta hydrolase fold-3 domain protein TERM 3132 2298585 - 2298636 + F 100 -9.1 -5.4148 | gap 2, opp_overlap 2298597 TATACTTTTTTGAAC GATGGTTGATAATTTGGAGCATTTC TTGC GGAATG-TCCAAAT-GTCAGCCGTC TTTTTTGCTTATTTA TERM 3133 2298849 - 2298868 + G 83 -10 -4.2558 | opp_overlap 2298849 TATTGGCGATGAAAA CCGTCAGG CGAT CCTGATGG TTTTGATGGAAACTA TERM 3134 2298868 - 2298849 - g 75 -7.8 -4.2558 | opp_overlap 2298849 TATTGGCGATGAAAA CCGTCAGG CGAT CCTGATGG TTTTGATGGAAACTA Dhaf_2130 2298766 - 2299116 + | transcriptional regulator, ArsR family Dhaf_2131 2299132 - 2299839 + | nitroreductase Dhaf_2132 2299923 - 2300423 + | hypothetical protein TERM 3135 2300932 - 2300942 + G 80 -4.6 -5.06414 | overlap 2300930 TGTTCACCGTACCGG CGGG GCT CCTG TTTTTATTACGGCCA Dhaf_2133 2300417 - 2301058 + | hypothetical protein TERM 3136 2302600 - 2302614 + G 75 -5.7 -4.5032 | TTGAAAACAGCACTA CGTCA GTTAA TGACG TTTGTTCTTAATCTA Dhaf_2134 2301388 - 2302740 + | transposase IS4 family protein Dhaf_2135 2302811 - 2302945 + | hypothetical protein TERM 3137 2302992 - 2303020 + F 100 -14 -5.75538 | overlap 2302990 ATGGGTGGCACCACG GTCCAATCGTCC CTTGA GGATGATTGGAC TTTTTATTTTTTAAC Dhaf_2136 2303058 - 2304053 + | tryptophanyl-tRNA synthetase TERM 3138 2304065 - 2304097 + F 100 -16.5 -3.25223 | opp_overlap 2304065 CTGAGTTGGTATAAA GGGCTATGTTTTCCA AGG TTGAAAACATAGCCC TTACTAGTCTCACTA TERM 3139 2304097 - 2304065 - f 100 -16.5 -3.86897 | opp_overlap 2304065 CTGAGTTGGTATAAA GGGCTATGTTTTCCA AGG TTGAAAACATAGCCC TTACTAGTCTCACTA Dhaf_2137 2304171 - 2304299 + | hypothetical protein TERM 3140 2304635 - 2304577 - f 100 -34.9 -3.19509 | opp_overlap 2304586 2304592 2304595 2304627 2304630, overlap 2304579 2304592 2304595 GGGTAAGAACATATA GAGTGCACAGCCAAAGAACGGTGCGGA TTTCG TCCGCACCGTTCTTTGGCTGTGCTCGC TGAGTCAGCGAGCTT TERM 3141 2304633 - 2304579 - f 100 -36.1 -3.15378 | opp_overlap 2304586 2304592 2304595 2304627 2304630, overlap 2304577 2304592 2304595 GTAAGAACATATAGA GTGCACAGCCAAAGAACGGTGCGGA TTTCG TCCGCACCGTTCTTTGGCTGTGCTC GCTGAGTCAGCGAGC TERM 3142 2304586 - 2304626 + F 100 -29.3 -2.81133 | opp_overlap 2304579 2304577 2304592 2304595, overlap 2304592 2304595 CATATAGAGTGCACA GCCAAAGAACGGTGCGGAT TTC GTCCGCACCGTTCTTTGGC TGTGCTCGCTGAGTC TERM 3143 2304620 - 2304592 - f 100 -19 -3.71378 | opp_overlap 2304586 2304592 2304595, overlap 2304579 2304577 2304595 GAGTGCACAGCCAAA GAACGGTGCGGA TTTCG TCCGCACCGTTC TTTGGCTGTGCTCGC TERM 3144 2304592 - 2304620 + F 100 -19.7 -3.727 | opp_overlap 2304592 2304579 2304577 2304595, overlap 2304586 2304595 GAGTGCACAGCCAAA GAACGGTGCGGAT TTC GTCCGCACCGTTC TTTGGCTGTGCTCGC TERM 3145 2304617 - 2304595 - f 100 -14.9 -3.98913 | opp_overlap 2304592 2304586 2304595, overlap 2304592 2304579 2304577 TGCACAGCCAAAGAA CGGTGCGGA TTTCG TCCGCACCG TTCTTTGGCTGTGCT TERM 3146 2304595 - 2304617 + F 100 -15.6 -3.99315 | opp_overlap 2304595 2304592 2304579 2304577, overlap 2304592 2304586 TGCACAGCCAAAGAA CGGTGCGGAT TTC GTCCGCACCG TTCTTTGGCTGTGCT TERM 3147 2304630 - 2304648 + F 100 -14.6 -3.87325 | opp_overlap 2304579 2304577, overlap 2304627 CCGTTCTTTGGCTGT GCTCGCTG AGT CAGCGAGC TTCTATATTTGTTTT Dhaf_2139 2305603 - 2305974 + | FMN-binding domain protein TERM 3148 2306006 - 2306056 + F 100 -13.5 -3.09327 | gap 1, opp_overlap 2306009 2306010 2306017 2306024, overlap 2306017 2306024 TTTATATATATTCAT GAATCATCAGAGTTAAAAGCCCGC GTAA GCGGGCTTTTAACTCT-ATGCCAC TGTTCAATACAATAA TERM 3149 2306053 - 2306009 - f 100 -18.2 -3.21622 | gap 1, opp_overlap 2306006 2306017 2306024, overlap 2306010 2306017 2306024 ATATATATTCATGAA TCATCAGAGTTAAAAGCCCGC GTAA GCGGGCTTTTAACTCT-ATGC CACTGTTCAATACAA TERM 3150 2306052 - 2306010 - f 100 -21.7 -2.52491 | gap 1, opp_overlap 2306006 2306017 2306024, overlap 2306009 2306017 2306024 TATATATTCATGAAT CATCAGAGTTAAAAGCCCGC GTAA GCGGGCTTTTAACTCT-ATG CCACTGTTCAATACA TERM 3151 2306017 - 2306046 + F 100 -19.5 -2.89668 | opp_overlap 2306010 2306009 2306017 2306024, overlap 2306006 2306024 TCATGAATCATCAGA GTTAAAAGCCCGC GTAA GCGGGCTTTTAAC TCTATGCCACTGTTC TERM 3152 2306046 - 2306017 - f 100 -19.5 -2.87136 | opp_overlap 2306017 2306006 2306024, overlap 2306010 2306009 2306024 TCATGAATCATCAGA GTTAAAAGCCCGC GTAA GCGGGCTTTTAAC TCTATGCCACTGTTC TERM 3153 2306024 - 2306039 + F 100 -11.8 -4.26188 | opp_overlap 2306017 2306010 2306009 2306024, overlap 2306017 2306006 TCATCAGAGTTAAAA GCCCGC GTAA GCGGGC TTTTAACTCTATGCC TERM 3154 2306039 - 2306024 - f 100 -11.8 -4.24948 | opp_overlap 2306024 2306017 2306006, overlap 2306017 2306010 2306009 TCATCAGAGTTAAAA GCCCGC GTAA GCGGGC TTTTAACTCTATGCC TERM 3155 2306444 - 2306470 + F 80 -3.8 -5.38326 | opp_overlap 2306445 2306446 CTGACTAAAGAAAAA CTGTTTTCAA ACAAGAC TTGGAAACGG TTTTTCTTTAGTTAG Dhaf_2141 2306626 - 2306895 + | hypothetical protein Dhaf_2142 2306930 - 2307517 + | hypothetical protein TERM 3156 2307611 - 2307643 + F 95 -13 -3.15861 | gap 1, opp_overlap 2307611 2307640 2307641 TGGGTGGAATATAAA GGGCTATGTTTTTCA AGGT TGAAAA-CATAGCCC TTACTAAGGCTGATA TERM 3157 2307643 - 2307611 - f 100 -13 -4.1891 | gap 1, opp_overlap 2307611, overlap 2307640 2307641 TGGGTGGAATATAAA GGGCTATGTTTTTCA AGGT TGAAAA-CATAGCCC TTACTAAGGCTGATA TERM 3158 2307739 - 2307702 - f 100 -23.1 -2.91264 | opp_overlap 2307712, overlap 2307712 TTTCTGACGGAGAGA GCATGTCAAATTGGTCA CTGG TGACCAATTTGACATGC TCCCAGGTCGCCCTC TERM 3159 2307729 - 2307712 - f 73 -8.5 -3.63336 | opp_overlap 2307712, overlap 2307702 AGAGAGCATGTCAAA TTGGTCA CTGG TGACCAA TTTGACATGCTCCCA TERM 3160 2307712 - 2307729 + F 73 -8.5 -3.62096 | opp_overlap 2307712 2307702 AGAGAGCATGTCAAA TTGGTCA CTGG TGACCAA TTTGACATGCTCCCA Dhaf_2143 2307877 - 2308569 + | hypothetical protein Dhaf_2144 2308585 - 2309403 + | transcriptional regulator, MerR family TERM 3161 2309404 - 2309422 + F 100 -13.2 -4.67697 | opp_overlap 2309400 2309399 TATAAAAAACCTTGA CCCTCCAA CTA TTGGAGGG TTTATTATTTTACCA Dhaf_2145 2309454 - 2310131 + | protein of unknown function DUF554 TERM 3162 2310191 - 2310208 + F 76 -2.6 -5.38321 | opp_overlap 2310191 2310192, overlap 2310192 TTTCAAGTATTGAAA GGGGGT TTGTTT ACCCCG TTTTTTATGCTCTTT TERM 3163 2310318 - 2310302 - f 80 -4.5 -5.14965 | overlap 2310314 ATCGGGAGGAAAAAA GAAAAAT AAG ATTTCTC TGAGAACAGTTGGAA Dhaf_2146 2310563 - 2311249 + | two component transcriptional regulator, winged helix family Dhaf_2147 2311251 - 2312213 + | histidine kinase TERM 3164 2312236 - 2312264 + F 95 -7.6 -5.07652 | TTGTTGTGTTATCCT GTCTGTATCA AGGAAAAAC TGATACAGAC TTTTCTTTTGGAGGA TERM 3165 2312783 - 2312764 - g 71 -7.1 -3.98282 | overlap 2312765 GCCATAGCAACCAAA CCGGCCA TTATCC TGGCCGA TGAACCCACCGGGAA Dhaf_2148 2312287 - 2312964 + | ABC transporter related TERM 3166 2314082 - 2314094 + G 71 -6.9 -4.27211 | overlap 2314079 TCCCCTCATCTTCGC CGGGG CGG CCCTG TTTGCTTTATTTACG TERM 3167 2315071 - 2315053 - g 72 -10.2 -3.02043 | opp_overlap 2315043 2315051 2315051 2315065 AAGGCCTGCGGAACA CCGCCGTT CTG ATCGGCGG CAGTTTGGCGGCGAT Dhaf_2149 2312961 - 2315456 + | protein of unknown function DUF214 TERM 3168 2315481 - 2315517 + F 100 -18.1 -5.24129 | opp_overlap 2315481 GAGATGATGTTAAAA CCGGCCTTTTGCGGGAG TGA TTCCCCCAAAAGGTCGG TTTTTTCTACAAGGG TERM 3169 2315517 - 2315481 - f 100 -15.2 -4.16279 | opp_overlap 2315481 GAGATGATGTTAAAA CCGGCCTTTTGCGGGA GTGAT TCCCCCAAAAGGTCGG TTTTTTCTACAAGGG Dhaf_2150 2315607 - 2316077 + | hypothetical protein Dhaf_2151 2316583 - 2316113 - | hypothetical protein TERM 3170 2316710 - 2316747 + r 100 -16.4 -3.54622 | gap 1, opp_overlap 2316711 2316714, overlap 2316701 2316711 GCCTTTTGCGAAAGT AGAAGCAGGCCGGC-GT TTTGC ACTGCCGGCCTGCTTCA TTATACTACTTTTTT TERM 3171 2316711 - 2316746 + r 100 -19.9 -2.71146 | gap 1, opp_overlap 2316711 2316714, overlap 2316710 2316701 CCTTTTGCGAAAGTA GAAGCAGGCCGGC-GT TTTGC ACTGCCGGCCTGCTTC ATTATACTACTTTTT TERM 3172 2316746 - 2316711 - R 100 -19.9 -2.90496 | gap 1, opp_overlap 2316711 2316710 2316701, overlap 2316714 CCTTTTGCGAAAGTA GAAGCAGGCCGGC-GT TTTGC ACTGCCGGCCTGCTTC ATTATACTACTTTTT TERM 3173 2316743 - 2316714 - R 100 -15.8 -3.60151 | gap 1, opp_overlap 2316711 2316710 2316701, overlap 2316711 TTTGCGAAAGTAGAA GCAGGCCGGC-GT TTTGC ACTGCCGGCCTGC TTCATTATACTACTT Dhaf_2152 2317822 - 2316818 - | Peptidoglycan-binding LysM TERM 3174 2317945 - 2317959 + H 76 -2.9 -5.40072 | opp_overlap 2317945 GACTTTAAAACAGGA GTATT ATTAA AATAC TTTTTTTCACCAAAG TERM 3175 2318787 - 2318768 - g 86 -8 -4.86001 | opp_overlap 2318768 2318770 2318786 ATCATCGCATAAAAA CAGATAAT GGCC ATTATCTG TGCTATCACGTTATG Dhaf_2153 2318344 - 2318844 + | GCN5-related N-acetyltransferase TERM 3176 2318834 - 2318846 + T 70 -7.7 -3.61764 | opp_overlap 2318824 GGAAATCTGATTCCC CCTCA GAC TGAGG TTTGGCAGTTGATAC TERM 3177 2318942 - 2318992 + T 79 -7.7 -4.33151 | gap 1, opp_overlap 2318942 2318959 2318961, overlap 2318959 CATCTTTTTTAGTAA GAGAGGCAAAGCATAGAGACACTC CGAA GAGTGTCTGTGT-CTAAGCTTCTC TTTTGCATTCTCATA TERM 3178 2318976 - 2318959 - T 73 -9.9 -3.06483 | opp_overlap 2318959 2318942, overlap 2318942 2318961 GAGGCAAAGCATAGA GACACTC CGAA GAGTGTC TGTGTCTAAGCTTCT TERM 3179 2318959 - 2318976 + T 73 -9.9 -3.01261 | opp_overlap 2318942 2318959 2318961, overlap 2318942 GAGGCAAAGCATAGA GACACTC CGAA GAGTGTC TGTGTCTAAGCTTCT Dhaf_2154 2319293 - 2319003 - | nitroreductase Dhaf_2155 2319682 - 2321631 + | putative cell wall binding repeat 2-containing protein TERM 3180 2321685 - 2321711 + F 79 -6.6 -4.74504 | opp_overlap 2321689 2321707 CAGGAAGGTATTGAC CAAAGCCTATAG CAG CTATAGACTATG TTTTTAAATTCCACT TERM 3181 2321707 - 2321689 - f 75 -8.2 -3.76968 | opp_overlap 2321685 AAGGTATTGACCAAA GCCTATAG CAG CTATAGAC TATGTTTTTAAATTC TERM 3182 2321781 - 2321820 + F 76 -11 -2.62642 | overlap 2321780 CAGAAGGTGATTGCA TTTAGCTAATTTGAAAAC TTAG GTTGACAAATTAGCTAAA ATTATGAATAATAGT Dhaf_2156 2321865 - 2322593 + | prevent-host-death family protein TERM 3183 2322698 - 2322726 + G 73 -4.6 -4.79352 | overlap 2322700 GCGGTAAGGAATTTG GACACCTTAG CGCTGCATC CTAAGGTGAC TTTTCTTGTCGGTGA Dhaf_2157 2322590 - 2323342 + | AAA ATPase TERM 3184 2323374 - 2323394 + T 100 -12.5 -5.3104 | overlap 2323375 TGAACATTACCTGTC TGCCCAGCC TTC GGCTGGGCC TTTTATTTTTGCTAA TERM 3185 2323375 - 2323393 + T 100 -16 -3.76997 | overlap 2323374 GAACATTACCTGTCT GCCCAGCC TTC GGCTGGGC CTTTTATTTTTGCTA Dhaf_2158 2324975 - 2323365 - | histidine kinase TERM 3186 2324234 - 2324251 + g 80 -7 -4.64676 | overlap 2324216 CGGAGAAATCCATTT CAGCCA GTTTAA TGGCTG TTTTATTCAGGGTGA TERM 3187 2324401 - 2324352 - G 86 -7.7 -4.84539 | gap 1, overlap 2324363 GAAGTAAACATAAAA CTGCCGGATAACCGCCGCCGCCTC CCC GATG-GGCTGCAGTGAAGCGGCAG CGGTCAGAACACCGG TERM 3188 2324404 - 2324363 - G 100 -15.1 -3.30903 | overlap 2324352 AAAACTGCCGGATAA CCGCCGCCGCCTCCCCG ATGGGCTG CAGTGAAGCGGCAGCGG TCAGAACACCGGTCA TERM 3189 2324763 - 2324784 + g 76 -8.7 -4.07568 | CTGAAATTCGCTTAG CAGTGCCGA GGAA TCGGTGCTG TTTTCGGCCAGCCGG TERM 3190 2324833 - 2324845 + g 85 -2.7 -5.52986 | overlap 2324834 TGCTGGAAATTGGCT TCAAA ATC TTTGG TTTTTTTGCTCAGGT Dhaf_2159 2325655 - 2324972 - | two component transcriptional regulator, winged helix family TERM 3191 2325293 - 2325311 + g 100 -13.2 -4.85782 | overlap 2325284 CTGAGCGCCGGCATC CGCCCTTT TTA AAAGGGCG TTTATTTTTGCCACC TERM 3192 2325909 - 2325891 - g 76 -7.4 -4.37871 | overlap 2325901 TGAAACAAAATGAAA TGGCCGAA AAT TTCCGCCA AGCGGAAAATAAACC TERM 3193 2325917 - 2325901 - g 87 -10.9 -4.12942 | overlap 2325891 TGAAATGGCCGAAAA TTTCCGC CAA GCGGAAA ATAAACCTTTTGCCC Dhaf_2160 2325885 - 2326763 + | binding-protein-dependent transport systems inner membrane component TERM 3194 2326755 - 2326744 - f 74 -4.4 -4.96848 | opp_overlap 2326744 TTGTGGAGAGAAAAA TCAG CAGG CTGA TTAATTAGAAGCTGA TERM 3195 2326786 - 2326774 - f 71 -6.9 -4.22338 | ATTAGAAGCTGAAAA CCGCC GCC GGCAG GGTCCGGGTTCCGAA TERM 3196 2327458 - 2327487 + G 71 -9.2 -3.59024 | overlap 2327470 2327483 AAATCATTGTGCCCA TGTCCAGGGCGG GGATAG CCGCCATGGCCA TTCTGGTCTTTATCG Dhaf_2161 2326827 - 2327711 + | binding-protein-dependent transport systems inner membrane component TERM 3197 2327835 - 2327823 - g 75 -3.3 -5.02074 | opp_overlap 2327829, overlap 2327826 TGAGGGTCGAAAAAA GCAGA CCA TCGGC CGCCTGAGTCTGATG TERM 3198 2328733 - 2328713 - g 93 -4.6 -5.52986 | opp_overlap 2328731 ATCTCAGCAAAAAAA CCAAGCCC TACCC GGCCCTGG TGCCCAACAGCGCCA Dhaf_2162 2327770 - 2328963 + | RND family efflux transporter MFP subunit TERM 3199 2329158 - 2329120 - g 77 -6.6 -4.51799 | gap 1, opp_overlap 2329145 2329154, overlap 2329123 2329140 ACCAAACCCATAAAA TCACCG-CTGTCCGGCA GGAAGA TGCCGGCCCGGCGGGGA GCGGGCCCCTTACTT TERM 3200 2329869 - 2329881 + G 80 -4.7 -5.02074 | opp_overlap 2329868 GAGATCTTCAGGAAG GACGG GGG CCGGC TTTTTTCCGGCCTGG Dhaf_2163 2328960 - 2330366 + | hypothetical protein TERM 3201 2330440 - 2330481 + G 71 -6.8 -4.25848 | gap 2, opp_overlap 2330447, overlap 2330441 GCCAGGTCACCGCCG TCAGGAA-TCTTT-CCCTGG AGAT CCAGGACAAAGAATTCCTGG TTTTGGTAGGCCCTT TERM 3202 2330941 - 2330930 - g 70 -2.2 -4.83615 | overlap 2330911 CAGGCTTCATAAAAA GCTG GCCA CAAC CTTTATCTATGTGAC TERM 3203 2331153 - 2331134 - g 77 -4.9 -5.00196 | overlap 2331137 TTTTAAAGAACAAAA GAACGGC CTCTGT GCCGGTC TGGGGGGGGTTCTCC TERM 3204 2331150 - 2331137 - g 73 -5.2 -4.57912 | overlap 2331134 TAAAGAACAAAAGAA CGGC CTCTGT GCCG GTCTGGGGGGGGTTC Dhaf_2164 2330382 - 2331560 + | ABC transporter related TERM 3205 2332132 - 2332113 - g 76 -7.1 -4.32857 | opp_overlap 2332127 GCTTTGAAATATAAA GACAGCC TCTATG GGCTGCC CCTCAGCTTCAGTGT Dhaf_2165 2331600 - 2333045 + | extracellular solute-binding protein family 1 TERM 3206 2333073 - 2333092 + F 100 -15 -4.75308 | opp_overlap 2333058 2333073 GGCTTCTTTATAAAA CGCCGGCT GCCC AGCCGGCG TTTTTGGCTGTTCGT TERM 3207 2333092 - 2333073 - f 100 -15 -4.36914 | opp_overlap 2333073, overlap 2333058 GGCTTCTTTATAAAA CGCCGGCT GCCC AGCCGGCG TTTTTGGCTGTTCGT TERM 3208 2333310 - 2333339 + G 80 -9.2 -4.18762 | opp_overlap 2333296 GGCCGGCCACTCTAT CCCTGCTGCCGG ATGTAG CCGGCAAAAGGG TTTTGGATGCGGGTT TERM 3209 2333397 - 2333411 + G 76 -11.4 -2.77781 | overlap 2333394 TGCTGGATAAGGGGG CGGCAG TAA CTGCCG TGGATTTTAGTGCCG Dhaf_2166 2333198 - 2333911 + | Methyltransferase type 11 Dhaf_2167 2333963 - 2334904 + | protein of unknown function DUF6 transmembrane TERM 3210 2335929 - 2335948 + G 76 -9.2 -3.91084 | TCCTAACGGCAGCGG GGTCCCGG CCAT CCGGGAAC TTTCCTTCACCGTCA TERM 3211 2336471 - 2336450 - g 74 -9.5 -3.58522 | gap 1 ATGACTACCGGCAAA CGCT-GGTGA TGA TCACCCAGCG CTGCGGAACAGCCAT Dhaf_2168 2334901 - 2336619 + | ABC transporter related TERM 3212 2337634 - 2337658 + G 71 -4.1 -4.6902 | opp_overlap 2337626, overlap 2337635 TTTAATACCATCCAG TCGGCTCTGGC CGG GGCGGAGCGGG TTTTTGAAATTCTGG Dhaf_2169 2336623 - 2338485 + | ABC transporter related Dhaf_2170 2339258 - 2338452 - | ABC transporter, permease component TERM 3213 2338825 - 2338809 - G 79 -10.1 -3.6869 | GATAGTAATGCCAAA GCGGTAG GCT CCACCGC ACAGTCCCAGCAGGG Dhaf_2171 2340154 - 2339255 - | ABC transporter related Dhaf_2172 2340372 - 2340698 + | transcriptional regulator, PadR-like family Dhaf_2173 2340685 - 2341266 + | hypothetical protein TERM 3214 2341304 - 2341352 + F 75 -5.5 -4.82901 | gap 1, overlap 2341307 GCTGGAATTCCTATA TGGCTCCTTGTTCTGTGCTTGA ATAATA TC-AGCACAAAATAAGGAGTTG TTTTTATGGCCCAAA TERM 3215 2341307 - 2341349 + F 95 -9.4 -4.52873 | gap 1, overlap 2341304 GGAATTCCTATATGG CTCCTTGTTCTGTGCTTGA ATAATA TC-AGCACAAAATAAGGAG TTGTTTTTATGGCCC TERM 3216 2341920 - 2341938 + G 71 -7.4 -4.11216 | opp_overlap 2341911 AAAAGGCGGCAGAGC TGGGCATG AAT CATACCCA TTTTGAAAATGCCAC Dhaf_2174 2341358 - 2342332 + | Serine-type D-Ala-D-Ala carboxypeptidase Dhaf_2175 2342503 - 2343186 + | hypothetical protein TERM 3217 2343397 - 2343407 + G 87 -6.8 -5.13343 | overlap 2343376 CTGAGATCGTCGCTC TGGG CTA CCCA TTTTATTTTCAGTTC TERM 3218 2343637 - 2343650 + G 71 -3.8 -4.73448 | overlap 2343612 2343611 CAGGTTACACCCAGC GCTG CATTTT CAGC TTTTTGGATATGTAT Dhaf_2176 2343183 - 2344136 + | Domain of unknown function DUF1848 TERM 3219 2344242 - 2344258 + F 70 -5.1 -4.44046 | AACGATGGTAAGGAG TCCAAGC CTT GCTTTGA TTTGTTTAACCTGAA TERM 3220 2344772 - 2344759 - g 71 -4.5 -4.56775 | overlap 2344760 2344762 ACTTGTCCTCAAAAA CGACG AGAG CATCG CCCGGATTGAGGAAA Dhaf_2177 2344352 - 2345833 + | methyl-accepting chemotaxis sensory transducer TERM 3221 2345982 - 2346019 + T 70 -3.5 -4.81551 | opp_overlap 2345982 GAAAAGTTTTGAAAA GTAAGCAAAAATGAACC TGTT GGGTGACTTTTGTTTAC TTTTTGCTGTCACTC TERM 3222 2346030 - 2346049 + T 81 -12.2 -2.53995 | TTTACTTTTTGCTGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAGGT TERM 3223 2346099 - 2346118 + T 81 -12.2 -2.55253 | opp_overlap 2346096, overlap 2346090 GCTCCGGTCAAACGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTGGT TERM 3224 2346166 - 2346185 + T 81 -12.2 -2.55253 | overlap 2346155 GCGCGGGGGGATGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTCCT TERM 3225 2346234 - 2346253 + T 81 -12.2 -2.53876 | CGCGCCATTCGTAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATACCC TERM 3226 2346302 - 2346321 + T 81 -12.2 -2.53876 | opp_overlap 2346294 TCACAAGCGCATCGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCGGG TERM 3227 2346369 - 2346388 + T 81 -12.2 -2.55818 | opp_overlap 2346363 2346367, overlap 2346364 AAAAGCTAATGGAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTATT TERM 3228 2346436 - 2346455 + T 81 -12.2 -2.55551 | AACTACCGCTAAGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTCTG TERM 3229 2346502 - 2346521 + T 81 -12.2 -2.54523 | GTCATCACCGCTGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATATGC TERM 3230 2346570 - 2346589 + T 81 -12.2 -2.55253 | AATCCAAATGTGCGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTCGT TERM 3231 2346636 - 2346655 + T 81 -12.2 -2.53876 | opp_overlap 2346618 2346622, overlap 2346619 ACTGACTCCATGAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCGCA TERM 3232 2346702 - 2346721 + T 81 -12.2 -2.54193 | opp_overlap 2346680 2346683 2346700 2346704, overlap 2346680 CATGACTATGTAAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATGCTG TERM 3233 2346768 - 2346787 + T 81 -12.2 -2.55074 | AGATACCCTCACCGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTCCA TERM 3234 2346836 - 2346855 + T 81 -12.2 -2.54702 | CCTTGACCTCATCGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATATGT TERM 3235 2346902 - 2346921 + T 81 -12.2 -2.53876 | opp_overlap 2346894 GAGGAGAGCGTGTGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAGGC TERM 3236 2346969 - 2346988 + T 81 -12.2 -2.55551 | GCCACCTGGGGATGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTGTC TERM 3237 2347035 - 2347054 + T 81 -12.2 -2.56046 | CTCAGTAGCAGTGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTTAA TERM 3238 2347103 - 2347122 + T 81 -12.2 -2.53876 | CAGGCTCGACTCCGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCGCG TERM 3239 2347169 - 2347188 + T 81 -12.2 -2.53876 | opp_overlap 2347160 2347167 ATGATAGAGTAGAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAAAC TERM 3240 2347238 - 2347257 + T 81 -12.2 -2.53876 | GCTCCACAATGTTGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAAGC TERM 3241 2347304 - 2347323 + T 81 -12.2 -2.53876 | opp_overlap 2347301 2347296 TTAATAATTCAACGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAAGC TERM 3242 2347370 - 2347389 + T 81 -12.2 -2.56761 | opp_overlap 2347367 2347362, overlap 2347362 2347361 TTAATAATTCAACGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTTTC TERM 3243 2347439 - 2347458 + T 81 -12.2 -2.55074 | opp_overlap 2347441 TGGGCCTCCTTAAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTGGA TERM 3244 2347506 - 2347525 + T 81 -12.2 -2.53876 | overlap 2347490 GAGTAGACGGCATGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCCGG TERM 3245 2347573 - 2347592 + T 81 -12.2 -2.53876 | TCATCCTCATGTCGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCGGC TERM 3246 2347640 - 2347659 + T 81 -12.2 -2.54523 | overlap 2347635 TAACCGAACTGGAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATATCA TERM 3247 2347707 - 2347726 + T 81 -12.2 -2.53876 | opp_overlap 2347709 GCTTTACGGCCAAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCCAC TERM 3248 2347774 - 2347793 + T 81 -12.2 -2.53995 | overlap 2347769 AAAATCAATGGGTGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAGCT TERM 3249 2347840 - 2347859 + T 81 -12.2 -2.55074 | opp_overlap 2347834, overlap 2347835 TTTTAAAATTGGAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTAAG TERM 3250 2347907 - 2347926 + T 81 -12.2 -2.55 | GGGTTTCATTTTTGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATATTA TERM 3251 2347975 - 2347994 + T 81 -12.2 -2.54702 | GAATCCTCTATCAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATATAT TERM 3252 2348044 - 2348063 + T 81 -12.2 -2.54193 | opp_overlap 2348040 GCCAATAATTATGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAATG TERM 3253 2348111 - 2348130 + T 81 -12.2 -2.53876 | TATGAGTGGGAATGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCCAC TERM 3254 2348178 - 2348197 + T 81 -12.2 -2.56761 | CTACAGCTGGAACGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTTTG TERM 3255 2348244 - 2348263 + T 81 -12.2 -2.53876 | TCTAGCAATGTCAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATGAAG TERM 3256 2348313 - 2348332 + T 81 -12.2 -2.53876 | opp_overlap 2348301 GAACCATACTCCTGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCGGC TERM 3257 2348382 - 2348401 + T 81 -12.2 -2.54193 | opp_overlap 2348384 GGCGCAACCGCAAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCGTG TERM 3258 2348451 - 2348470 + T 81 -12.2 -2.56761 | overlap 2348440 TGAGGGAGGTGCGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTTTA TERM 3259 2348520 - 2348539 + T 81 -12.2 -2.53876 | CCTGGATGCCAACGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAAAA TERM 3260 2348589 - 2348608 + T 81 -12.2 -2.53876 | overlap 2348584 GCACCCTTGGGGGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATGGGG TERM 3261 2348656 - 2348675 + T 81 -12.2 -2.54193 | CAAAATCAGCTACGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATAGTA TERM 3262 2348723 - 2348742 + T 81 -12.2 -2.55074 | opp_overlap 2348701 2348694, overlap 2348706 AGTGCCTCCGGTAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTAAA TERM 3263 2348790 - 2348809 + T 81 -12.2 -2.53876 | opp_overlap 2348788 TTAAGTCAAATAGGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCAGC TERM 3264 2348844 - 2348863 + T 71 -10 -2.62735 | overlap 2348858 CCTGCTCTGGTGACT GGAGTGGC CATA GTCACTCC TCGTATGAGGAGTGT TERM 3265 2348858 - 2348877 + T 81 -12.2 -2.54193 | overlap 2348844 TGGAGTGGCCATAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATCCTC TERM 3266 2348924 - 2348943 + T 81 -12.2 -2.55074 | overlap 2348919 AGATGCCTAGGGAGT CACTCCTC GTAT GAGGAGTG TGGATTGAAATTGCG TERM 3267 2348993 - 2349012 + T 81 -12.2 -2.55253 | opp_overlap 2348995 GCAGAGCTGCCAAGT CACTCCTC GTGT GAGGAGTG TGGATTGAAATTCCT TERM 3268 2349061 - 2349080 + T 70 -10 -2.53876 | opp_overlap 2349063, overlap 2349051 CCGCAGGGGTGAAGT CACTCCTC GTAT GGGGAGTG TGGATTGAAATAAGG TERM 3269 2349259 - 2349317 + T 100 -19.8 -4.87291 | opp_overlap 2349272 2349276, overlap 2349261 2349270 ATTTCAACTGGTCCC TTGATTTCTAATACAAAGCCGGCCTGGG ATC CCCAGGTCGGCTTTGTATTACATAGCTA TTTTTGATTCCAATA TERM 3270 2349261 - 2349315 + T 100 -22.4 -4.05402 | opp_overlap 2349272 2349276, overlap 2349259 2349270 TTCAACTGGTCCCTT GATTTCTAATACAAAGCCGGCCTGGG ATC CCCAGGTCGGCTTTGTATTACATAGC TATTTTTGATTCCAA TERM 3271 2349270 - 2349306 + T 100 -26.1 -3.11103 | opp_overlap 2349272 2349276, overlap 2349261 2349259 TCCCTTGATTTCTAA TACAAAGCCGGCCTGGG ATC CCCAGGTCGGCTTTGTA TTACATAGCTATTTT TERM 3272 2349304 - 2349272 - T 100 -22.1 -3.04144 | opp_overlap 2349270 2349261 2349259, overlap 2349276 CCTTGATTTCTAATA CAAAGCCGGCCTGGG ATC CCCAGGTCGGCTTTG TATTACATAGCTATT TERM 3273 2349300 - 2349276 - T 100 -17.1 -4.19624 | opp_overlap 2349270 2349261 2349259, overlap 2349272 GATTTCTAATACAAA GCCGGCCTGGG ATC CCCAGGTCGGC TTTGTATTACATAGC Dhaf_2178 2349543 - 2349307 - | hypothetical protein Dhaf_2179 2349766 - 2350344 + | transcriptional regulator, TetR family Dhaf_2180 2350393 - 2351610 + | iron-containing alcohol dehydrogenase Dhaf_2181 2351612 - 2352982 + | Aldehyde Dehydrogenase TERM 3274 2352979 - 2353024 + T 84 -11.3 -3.12668 | opp_overlap 2352985, overlap 2352981 2352983 2352985 TAAGAAGCTTATGAA GTAAAATTTCAGCACAGACTG CAGT TAGTCTGTGCTGAAATCTATC TCTTGAAGTTTAGAA TERM 3275 2352981 - 2353022 + T 93 -12.5 -3.1207 | opp_overlap 2352985, overlap 2352979 2352983 2352985 AGAAGCTTATGAAGT AAAATTTCAGCACAGACTG CAGT TAGTCTGTGCTGAAATCTA TCTCTTGAAGTTTAG TERM 3276 2352983 - 2353020 + T 100 -15.1 -3.11361 | opp_overlap 2352985, overlap 2352981 2352979 2352985 AAGCTTATGAAGTAA AATTTCAGCACAGACTG CAGT TAGTCTGTGCTGAAATC TATCTCTTGAAGTTT TERM 3277 2352985 - 2353018 + T 100 -17.7 -3.10761 | opp_overlap 2352985, overlap 2352983 2352981 2352979 GCTTATGAAGTAAAA TTTCAGCACAGACTG CAGT TAGTCTGTGCTGAAA TCTATCTCTTGAAGT TERM 3278 2353018 - 2352985 - T 100 -17 -4.45544 | opp_overlap 2352985 2352983 2352981 2352979 GCTTATGAAGTAAAA TTTCAGCACAGACT GCAGTT AGTCTGTGCTGAAA TCTATCTCTTGAAGT Dhaf_2182 2353403 - 2353242 - | hypothetical protein TERM 3279 2354163 - 2354148 - g 83 -2.5 -5.63504 | overlap 2354149 AATGGGATAAAAAAA CGACC TCCCCC GGTCA TGCTTATCAAAGTAT Dhaf_2183 2353766 - 2354440 + | CRISPR-associated protein Cas5 TERM 3280 2354773 - 2354757 - g 71 -6.6 -4.26881 | CTTGACAAAATTAAA TCATGG TGTGT CCATGA CAACTGGAAAGGAAG Dhaf_2184 2354430 - 2356559 + | hypothetical protein TERM 3281 2356857 - 2356845 - g 73 -3.4 -4.91573 | AAAAGATATTAAAAA CTTC GAACA GAAG AGTTTCTTGGAGAGC TERM 3282 2357079 - 2357095 + G 80 -8.7 -4.39329 | TCCCTTAGCCTTTCG CATCGTG GAG CACGGTG TTTATTGTATGCCGT TERM 3283 2357268 - 2357285 + G 71 -9.1 -3.56273 | TGAGCATCTGAATGC TCTGGGC AGTT GCCCGGA TTATCTCCTCCTGGA Dhaf_2185 2356549 - 2357433 + | CRISPR-associated protein TM1801 TERM 3284 2357711 - 2357724 + G 73 -2.3 -5.0133 | opp_overlap 2357711 CTATTTTCTGAGAAA CAGCC ATTT GTCTG TTTTTTCCGCCGCTG TERM 3285 2358073 - 2358059 - g 76 -11.4 -2.90075 | overlap 2358016 GCTTGCCCAATTAGA CCGGCA TAT TGCCGG GCTGAAGCAAACAGG TERM 3286 2358509 - 2358519 + G 77 -4.6 -4.88067 | CTTGCATGAATTACC CGGC AGT GCTG TTTTTGTGGATGAAT Dhaf_2186 2357430 - 2359619 + | CRISPR-associated HD domain protein TERM 3287 2359861 - 2359877 + G 73 -2.2 -5.0538 | overlap 2359863 GGGAGCGCTGATTAT TTCCCG GGGTA TGGGGA TTTTTTCCCGTACCC Dhaf_2187 2359673 - 2360344 + | CRISPR-associated protein Cas4 TERM 3288 2360882 - 2360900 + G 70 -2.4 -4.87291 | overlap 2360884 TGCTGGATGATCTGA TTCTCC AGCAGAA GGAGGA TTTTTACTTCAAATG Dhaf_2188 2360341 - 2361372 + | CRISPR-associated protein Cas1 Dhaf_2189 2361373 - 2361672 + | CRISPR-associated protein Cas2 TERM 3289 2362607 - 2362562 - T 71 -9.7 -2.71791 | gap 1, opp_overlap 2362556, overlap 2362561 ATTTTTCGTCCAAAT CGGGTGCCTCGT-GAGGCCT GACGTCG AGGCCTCTACGAGGCTCGAG GGTTGAAATTTTTTC TERM 3290 2363007 - 2362986 - T 71 -9.5 -3.06694 | gap 1, overlap 2362985 AGGCATCTCCAAAAG TCGAGGCCTC TAC GAGGC-TCGA GGGTTGAAATATTGT TERM 3291 2363345 - 2363324 - T 71 -9.5 -3.04589 | gap 1, opp_overlap 2363339, overlap 2363323 GCAATATCAAAGAAG TCGAGGCCTC TAC GAGGC-TCGA GGGTTGAAATCCTCC TERM 3292 2363614 - 2363593 - T 71 -9.5 -2.97676 | gap 1, overlap 2363580 2363592 AGGGACTCAAAGAAG TCGAGGCCTC TAC GAGGC-TCGA GGGTTGAAATCCAAA TERM 3293 2365745 - 2365772 + T 78 -9.2 -3.65902 | gap 1 TTTTTTACGCGACGT TCGTCGAGGCCTC TGC GAGGC-TCGAGGA TTTAAATCGCCTAAG TERM 3294 2365925 - 2365958 + T 84 -11.1 -3.66921 | opp_overlap 2365924 2365922 2365927 2365929 ATATCTCTGAAATAT GATAGAGGATGCC AGATAAAA GGCATCCTCTAAC TTTCGCATTGCGATT TERM 3295 2365956 - 2365927 - T 89 -12.3 -2.84504 | opp_overlap 2365925, overlap 2365924 2365922 2365929 ATCTCTGAAATATGA TAGAGGATGCC AGATAAAA GGCATCCTCTA ACTTTCGCATTGCGA TERM 3296 2365954 - 2365929 - T 76 -10.5 -2.97021 | opp_overlap 2365925, overlap 2365927 2365924 2365922 CTCTGAAATATGATA GAGGATGCC AGATAAAA GGCATCCTC TAACTTTCGCATTGC Dhaf_2190 2367000 - 2365975 - | hypothetical protein Dhaf_2191 2367340 - 2366993 - | transcriptional regulator, PadR-like family TERM 3297 2367033 - 2367043 + g 79 -3.2 -5.20154 | CAAATGGATTCAATG TTGC TCT GCAG TTTTTTCCATTCTGT TERM 3298 2367900 - 2367919 + G 77 -4.8 -4.93296 | overlap 2367891 2367891 2367899 2367898 CTGGCTGCGCCGGGC CCGGCGGC TTCT GCCGGCAG TTTTTGTGATGCTGG Dhaf_2192 2367676 - 2369553 + | acyltransferase 3 Dhaf_2193 2369614 - 2370327 + | two component transcriptional regulator, winged helix family TERM 3299 2370916 - 2370940 + G 76 -8.5 -4.13767 | opp_overlap 2370910 2370906 AGGAAGTGACAGCCA TTGCCGAAAGC ATG GCTGCCGGCAA TTTTCAAATCAAGAG TERM 3300 2371581 - 2371593 + G 74 -9.1 -3.6239 | overlap 2371577 GGCAAGAGCTCTCGT TCCCG CAA CGGGA TTGGTTTATCCATCT Dhaf_2194 2370324 - 2371718 + | histidine kinase TERM 3301 2372371 - 2372384 + G 73 -5.2 -4.58395 | GAACAAATCTTTTTC CCGC GGACCA GCGG TTTTTGGGAACTCAG Dhaf_2195 2371711 - 2373198 + | hypothetical protein TERM 3302 2373286 - 2373336 + F 77 -10.9 -2.87132 | opp_overlap 2373286 2373285 2373288, overlap 2373288 GGACGAGGACAGAAT GACAAAAGCAAG-CTATACTGTATT GAA GAT-TAGTGTAGGCTTGCTTTTGTC TATGTACGGCAAACC TERM 3303 2373604 - 2373586 - g 78 -5.2 -4.92239 | TTAAAAATGTAAAAA GTGTCGTG GTG CCCAACAC CGATGGGTTAAAGGG Dhaf_2196 2373399 - 2374685 + | protein of unknown function DUF1063 TERM 3304 2374768 - 2374733 - f 91 -10.6 -4.21141 | opp_overlap 2374733 CCTTAATAAACCAAA CCCTGATTAAAGAACT GACA AGTTGATTAATCAGGG TTTTTAGCTAAGCAA TERM 3305 2374733 - 2374768 + F 100 -10.6 -4.65895 | opp_overlap 2374733 CCTTAATAAACCAAA CCCTGATTAAAGAACT GACA AGTTGATTAATCAGGG TTTTTAGCTAAGCAA Dhaf_2197 2374915 - 2376537 + | transcriptional regulator, PucR family Dhaf_2198 2376750 - 2378087 + | permease for cytosine/purines uracil thiamine allantoin Dhaf_2199 2378160 - 2379329 + | peptidase T-like protein Dhaf_2200 2379345 - 2379860 + | hypothetical protein TERM 3306 2380613 - 2380639 + G 74 -9.4 -3.78934 | CGGATCCGGCGGAAG CCTTTGCTTCGG CCG CCGGGGGAAAGG TTATTATGAAAGGGA Dhaf_2201 2379886 - 2381004 + | protein of unknown function DUF917 TERM 3307 2381089 - 2381060 - T 76 -7.7 -4.14013 | opp_overlap 2381060 GAAAAGGCGGCAAAA GACGACAACCGGC GGAA GCTGGAAGTCGTC TTTTGCTTAAAAGAA TERM 3308 2381060 - 2381089 + T 93 -9.9 -4.4078 | opp_overlap 2381060 GAAAAGGCGGCAAAA GACGACAACCGGC GGAA GCTGGAAGTCGTC TTTTGCTTAAAAGAA Dhaf_2202 2381996 - 2381115 - | transcriptional regulator, LysR family TERM 3309 2381696 - 2381726 + g 100 -4.7 -5.79595 | gap 1, opp_overlap 2381697, overlap 2381697 AAAGGGCGTTCAAGG AGCCGAGACCA-AT AGCA ATGTGGACTCGGCC TTTTTTGTTTTGGGA TERM 3310 2381697 - 2381725 + g 76 -8.2 -4.0613 | gap 1, opp_overlap 2381697, overlap 2381696 AAGGGCGTTCAAGGA GCCGAGACCA-AT AGCA ATGTGGACTCGGC CTTTTTTGTTTTGGG TERM 3311 2383463 - 2383449 - g 72 -5.7 -4.37658 | overlap 2383436 AACCGGCCGATAAAA TGGTC GGCAT GACCA AAGCTCCTTACTATA TERM 3312 2383568 - 2383557 - g 78 -5.8 -4.71828 | AGGTCATCAACAAAA TGGG TGAG CCCA TTCCCGGCTTGTATG Dhaf_2203 2382149 - 2383708 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein Dhaf_2204 2383769 - 2384185 + | FMN-binding domain protein TERM 3313 2384391 - 2384340 - T 100 -22.8 -3.48684 | gap 1, opp_overlap 2384345 2384354, overlap 2384345 2384354 CTATAATGATTAGAA TAGAAGACAGAAAAGGCTGTGAG TTGACTG CTC-CAGCCTTTTCTGTCTTCTA CGCCAAGCGCTTATT TERM 3314 2384345 - 2384386 + T 100 -17.6 -3.28712 | gap 1, opp_overlap 2384345 2384340 2384354, overlap 2384354 ATGATTAGAATAGAA GACAGAAAAGGCTGTGAGT TGACT GCTC-CAGCCTTTTCTGTC TTCTACGCCAAGCGC TERM 3315 2384386 - 2384345 - T 100 -16.9 -3.7821 | gap 1, opp_overlap 2384345 2384354, overlap 2384340 2384354 ATGATTAGAATAGAA GACAGAAAAGGCTGTGAG TTGACTG CTC-CAGCCTTTTCTGTC TTCTACGCCAAGCGC TERM 3316 2384377 - 2384354 - T 71 -4.6 -4.72127 | gap 1, opp_overlap 2384354 2384345, overlap 2384345 2384340 ATAGAAGACAGAAAA GGCTGTGAG TTGACTG CTC-CAGCC TTTTCTGTCTTCTAC TERM 3317 2384354 - 2384377 + T 73 -5.3 -4.71223 | gap 1, opp_overlap 2384345 2384340 2384354, overlap 2384345 ATAGAAGACAGAAAA GGCTGTGAGT TGACT GCTC-CAGCC TTTTCTGTCTTCTAC Dhaf_2205 2385122 - 2384457 - | B3/4 domain protein Dhaf_2206 2385595 - 2385152 - | transcriptional regulator, AsnC family TERM 3318 2385407 - 2385419 + g 79 -3.3 -5.27335 | GATACAGTCGATTGC GCAGC CAA GCTTC TTTTTGTTTAAACGG Dhaf_2207 2385733 - 2386149 + | hypothetical protein Dhaf_2209 2386915 - 2386595 - | hypothetical protein Dhaf_2210 2387079 - 2387954 + | transcriptional regulator, AraC family Dhaf_2211 2388917 - 2388048 - | hypothetical protein Dhaf_2212 2389322 - 2388951 - | hypothetical protein TERM 3319 2389415 - 2389389 - R 70 -3.7 -4.84602 | ATATAAAGAAACAAA CTGGATGGA CATGGGTAC TCCTTCCAG AGGCAGGTGGGCAAC Dhaf_2213 2392475 - 2389368 - | hypothetical protein TERM 3320 2390582 - 2390559 - G 71 -3.1 -4.83722 | overlap 2390560 AACATCATAAGAAAA CTCATCCCG TGGTTC CGGCATGAA CATGATGAGGTCCAT TERM 3321 2392322 - 2392352 + g 74 -6.8 -4.39748 | opp_overlap 2392319 2392320 2392312, overlap 2392324 TAAAATAAGAGACTT GATGAGGATCAAGG ATG CCCTGATCCCCATA TTCTTTTATCTCATC TERM 3322 2392324 - 2392350 + g 74 -9.4 -3.78861 | opp_overlap 2392319 2392320 2392312, overlap 2392322 AAATAAGAGACTTGA TGAGGATCAAGG ATG CCCTGATCCCCA TATTCTTTTATCTCA TERM 3323 2392679 - 2392689 + r 86 -6.8 -5.0133 | opp_overlap 2392671 AGACTAACAGAATTT CGGA ATT TCCG TTTTTTAAAAAACTA Dhaf_2214 2394060 - 2392702 - | transposase I1182 family protein TERM 3324 2394032 - 2394018 - G 71 -7.2 -4.12198 | overlap 2393997 GAGAAGTTTCTAAAA TTTCCT CCA AGGAAA ATAGACGTTCTTGGC TERM 3325 2394079 - 2394090 + r 73 -5.8 -4.45168 | GGAGTACTCCTTTCC CACC TCTC GGTG TTTGTGTTTTGGACG TERM 3326 2394127 - 2394137 + r 89 -6.8 -5.32944 | ATTTCGAGATGTTGG GGAG GTA CTCC TTTTTTAGTTGTCAA TERM 3327 2394204 - 2394257 + r 100 -12.5 -3.64487 | gap 1, opp_overlap 2394210, overlap 2394206 2394207 2394216 2394250 CTAATTCAGTGTATT AAAC-AACAGCAAGACGGCCTGGCTA AAA TGCCCAGGCCGTCTTGCTGTACGCTC TTATTGGGGGTGTGC TERM 3328 2394206 - 2394255 + r 100 -15.1 -3.40052 | gap 1, opp_overlap 2394210, overlap 2394204 2394207 2394216 2394250 AATTCAGTGTATTAA AC-AACAGCAAGACGGCCTGGCTA AAA TGCCCAGGCCGTCTTGCTGTACGC TCTTATTGGGGGTGT TERM 3329 2394207 - 2394254 + r 100 -18.6 -2.63549 | gap 1, opp_overlap 2394210, overlap 2394206 2394204 2394216 2394250 ATTCAGTGTATTAAA C-AACAGCAAGACGGCCTGGCTA AAA TGCCCAGGCCGTCTTGCTGTACG CTCTTATTGGGGGTG TERM 3330 2394250 - 2394210 - R 100 -22.8 -4.00756 | opp_overlap 2394207 2394206 2394204 2394216 CAGTGTATTAAACAA CAGCAAGACGGCCTGG CTAAAATGC CCAGGCCGTCTTGCTG TACGCTCTTATTGGG TERM 3331 2394216 - 2394244 + r 100 -15.3 -3.27766 | opp_overlap 2394210, overlap 2394207 2394206 2394204 ATTAAACAACAGCAA GACGGCCTGGCTA AAA TGCCCAGGCCGTC TTGCTGTACGCTCTT Dhaf_2215 2394720 - 2394340 - | hypothetical protein TERM 3332 2394911 - 2394887 - R 100 -17.1 -5.10163 | opp_overlap 2394881 2394887 2394910, overlap 2394888 AATTTGAAAAGAAAA GCCGGCCAGGG AGT CCCTGGCCGGG TATGTATTACATAGC TERM 3333 2394887 - 2394911 + r 100 -17.1 -3.11072 | opp_overlap 2394887 2394888, overlap 2394881 2394910 AATTTGAAAAGAAAA GCCGGCCAGGG AGT CCCTGGCCGGG TATGTATTACATAGC TERM 3334 2394910 - 2394888 - R 100 -20.6 -3.64471 | opp_overlap 2394887 2394881, overlap 2394887 ATTTGAAAAGAAAAG CCGGCCAGGG AGT CCCTGGCCGG GTATGTATTACATAG Dhaf_2216 2395181 - 2394939 - | hypothetical protein TERM 3335 2395465 - 2395453 - H 100 -10.5 -4.55128 | overlap 2395455 AGGTGGAAATTAAAA GGCCG CCG CGGCC CGAAAGTGCTACCAA TERM 3336 2395500 - 2395455 - H 71 -9.7 -2.5893 | gap 1, overlap 2395453 2395471 GTGGAAATTAAAAGG CCGCCGCG-GCCCGAAAGTGCT ACC AACACTTCCAGGCACGCGCAAG GTGTCGGAGCACCTA TERM 3337 2395676 - 2395709 + H 87 -8.2 -4.55798 | gap 1 GACAGTATGATTTCA GGCGCATGTGTAGGG ATAAA CCCT-TGCATGCGTC TTTTAATTTCCCCTG TERM 3338 2396204 - 2396192 - g 79 -10.5 -3.72576 | opp_overlap 2396193 2396194 CGCGTCTTGACTAAA CCGGC CCA GCCGG CAGCCATCTGGGACA Dhaf_2217 2395859 - 2396269 + | response regulator receiver protein TERM 3339 2396269 - 2396247 - f 80 -4.9 -5.24129 | gap 1, opp_overlap 2396263, overlap 2396250 2396251 TCTCGGCAGAAAAAA TCAGCC-CCA GCCA TAGTGGCTGA TGAGCCCTGCTTTTC TERM 3340 2396827 - 2396812 - g 80 -6.8 -4.73614 | CAGCAGGAAAATAAA GCCCTC AAAA AAGGGC TGGAGGGGATCAACA Dhaf_2218 2396362 - 2397219 + | hypothetical protein TERM 3341 2397212 - 2397230 + T 86 -8.8 -4.25104 | overlap 2397213 AGCCTCTGAAGGTTA TCCGCTGA TTG TCAGCGGC TTTTGGTCAAAACAG TERM 3342 2397213 - 2397229 + T 93 -12.3 -3.14848 | overlap 2397212 GCCTCTGAAGGTTAT CCGCTGA TTG TCAGCGG CTTTTGGTCAAAACA Dhaf_2219 2397867 - 2397223 - | Methyltransferase type 11 TERM 3343 2398584 - 2398559 - g 81 -6.1 -4.93547 | TCAATGAATTAAAAA GCCAACTCAGC GACG GCTGCATTGAC TTTGGACAACCTGAA TERM 3344 2399852 - 2399863 + G 73 -2.2 -5.02074 | TGGCTTACAGCAAAG GTCT GGGC AGGC TTTTTTGCAGCCTGA TERM 3345 2400698 - 2400686 - g 74 -6.9 -4.33819 | opp_overlap 2400686 2400687 2400695, overlap 2400687 ATCAGGCACAACAAA CGCCG ACC CGGCA TTATCTGAAGGATGC Dhaf_2220 2398123 - 2400771 + | small GTP-binding protein TERM 3346 2400779 - 2400832 + F 72 -7.8 -3.74251 | gap 2, overlap 2400781 AGGATTAGCTCTCAA TGCCCCTGCGCATCGCTAAATTTATT TTGC AATATATTTAGGGATGC--AGGGGTA TTTGCTGGAAATCTG TERM 3347 2400781 - 2400830 + F 71 -8.2 -3.45324 | gap 2, overlap 2400779 GATTAGCTCTCAATG CCCCTGCGCATCGCTAAATTTATT TTGC AATATATTTAGGGATGC--AGGGG TATTTGCTGGAAATC TERM 3348 2401172 - 2401201 + F 100 -11.5 -4.53703 | overlap 2401188 2401190 ATGATGGGATTTTAG GCGCATTTTCGAT TGTG AGCGAAAGTGCGC TTTTGCTATTGTTTT TERM 3349 2401407 - 2401420 + G 73 -9.5 -3.40775 | overlap 2401405 GAAAAAGTTTTTGAG GCGGG TCAA CCCGC TGTTTCCATGGGCGT Dhaf_2221 2401275 - 2401997 + | transcriptional regulator, Crp/Fnr family TERM 3350 2402489 - 2402513 + G 73 -8.5 -3.89524 | overlap 2402479 CAACTTAATTCTTGT GCTGGCGGGAA TTA TTGTCGCCGGC TTTATGAGCTCCGCT TERM 3351 2402642 - 2402663 + G 71 -8.7 -3.72324 | CATGATGATTGTGCC GGCGATGCT GATC AGCATGGCC TTATTGATAGCCGTA Dhaf_2222 2402004 - 2403044 + | transport system permease protein Dhaf_2223 2403041 - 2403820 + | ABC transporter related Dhaf_2224 2403869 - 2404702 + | protein of unknown function DUF364 Dhaf_2225 2404728 - 2405774 + | periplasmic binding protein Dhaf_2226 2405926 - 2406723 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 3352 2406872 - 2406849 - g 76 -9.6 -3.73775 | opp_overlap 2406849 TCTATCCTTATTAAA GGCTTCCC ATACCTTG GGGAAGCC TTTTTCTCAGAAGAA TERM 3353 2406849 - 2406872 + G 100 -9.6 -4.82901 | opp_overlap 2406849 TCTATCCTTATTAAA GGCTTCCC ATACCTTG GGGAAGCC TTTTTCTCAGAAGAA Dhaf_2227 2406741 - 2407565 + | binding-protein-dependent transport systems inner membrane component Dhaf_2228 2407556 - 2408281 + | ABC transporter related Dhaf_2229 2408307 - 2409164 + | modD protein TERM 3354 2409277 - 2409326 + T 81 -9.5 -3.74347 | gap 1, opp_overlap 2409280 2409283, overlap 2409261 2409260 2409258 2409279 2409280 2409283 CGGCTTCTTTTGCTT AAAGAAGCGGCCTATATTTCAC GATAAAA GTGGAATA-AGGCCGCTTCATA TTTACCCTTTGTGAA TERM 3355 2409279 - 2409324 + T 91 -12.1 -3.44991 | gap 1, opp_overlap 2409280 2409283, overlap 2409261 2409260 2409258 2409277 2409280 2409283 GCTTCTTTTGCTTAA AGAAGCGGCCTATATTTCAC GATAAAA GTGGAATA-AGGCCGCTTCA TATTTACCCTTTGTG TERM 3356 2409323 - 2409280 - T 100 -13.4 -3.53012 | gap 1, opp_overlap 2409261 2409260 2409258 2409279 2409277 2409280 2409283, overlap 2409283 CTTCTTTTGCTTAAA GAAGCGGCCTATATTTCAC GATAAAA GTGGAATA-AGGCCGCTTC ATATTTACCCTTTGT TERM 3357 2409280 - 2409323 + T 100 -15.6 -2.66271 | gap 1, opp_overlap 2409280 2409283, overlap 2409261 2409260 2409258 2409279 2409277 2409283 CTTCTTTTGCTTAAA GAAGCGGCCTATATTTCAC GATAAAA GTGGAATA-AGGCCGCTTC ATATTTACCCTTTGT TERM 3358 2409320 - 2409283 - T 81 -9.3 -3.90744 | gap 1, opp_overlap 2409261 2409260 2409258 2409280 2409279 2409277 2409283, overlap 2409280 CTTTTGCTTAAAGAA GCGGCCTATATTTCAC GATAAAA GTGGAATA-AGGCCGC TTCATATTTACCCTT TERM 3359 2409283 - 2409320 + T 89 -11.5 -3.46687 | gap 1, opp_overlap 2409283 2409280, overlap 2409261 2409260 2409258 2409280 2409279 2409277 CTTTTGCTTAAAGAA GCGGCCTATATTTCAC GATAAAA GTGGAATA-AGGCCGC TTCATATTTACCCTT Dhaf_2230 2410812 - 2409328 - | histidine kinase TERM 3360 2409577 - 2409531 - G 71 -8.8 -3.68795 | opp_overlap 2409538, overlap 2409528 2409527 CGAAAATCAAAGGAA CCGCTTC-CGGTTCAATGCCGA TTCCT TCGTC-CTGAACCGTGAGGCGG GCCAAGTTATCCTTG TERM 3361 2409585 - 2409631 + g 74 -9.7 -3.46534 | gap 1, overlap 2409584 TGAGGCGGGCCAAGT TATCCTTGCTGGAAA-CAGA GAGGGTGA TCTGCTTTCCGGCAGGGGTA TATTTCATAGCATTG Dhaf_2231 2411482 - 2410802 - | two component transcriptional regulator, winged helix family Dhaf_2232 2412060 - 2411509 - | ubiquitin-associated- domain-containing protein TERM 3362 2412508 - 2412481 - R 100 -14.3 -3.92625 | TATACTGGAATCAAA CAGGAGTCATG GGCAAA CATGACTCCTG GCAACAGCCGCTTGA TERM 3363 2412756 - 2412740 - R 100 -12.3 -3.58766 | opp_overlap 2412740 AATTATAGCATACAA GCACTCC ATC GGAGTGC TTTTTCTTATGTCAA TERM 3364 2412740 - 2412756 + r 100 -12.3 -5.24796 | opp_overlap 2412740 AATTATAGCATACAA GCACTCC ATC GGAGTGC TTTTTCTTATGTCAA Dhaf_2233 2413482 - 2412841 - | Chloramphenicol O-acetyltransferase Dhaf_2234 2413749 - 2414414 + | Rubredoxin-type Fe(Cys)4 protein Dhaf_2235 2414422 - 2415600 + | Rubrerythrin TERM 3365 2415629 - 2415652 + F 89 -10.3 -4.01158 | opp_overlap 2415628 ATAGACTAAAAGATG GGAGCTGTC GCTGAA GGCAGCTCC TTATTTGATCACCTT Dhaf_2236 2415810 - 2415917 + | hypothetical protein Dhaf_2238 2416533 - 2417234 + | protein of unknown function UPF0066 Dhaf_2239 2419574 - 2417250 - | protein of unknown function DUF214 TERM 3366 2417968 - 2417987 + g 75 -5.8 -4.614 | gap 1 AAGGCTCCCTCCTCA GGTAAAGGA ATC TCCTT-ACC TTTTGTATCCTTGAA TERM 3367 2419089 - 2419103 + g 71 -4.2 -4.6902 | GACAATCCCTTGGAT CAGCCA CTT TGTCTG TTTTTCCCCTTCTCC TERM 3368 2419594 - 2419630 + H 75 -10.2 -2.86338 | gap 1, overlap 2419588 2419593 2419622 TTCCCTCCAGCTCAA GGGGCGATTTTTCAAGG TGTT CCTTGATGAG-CGCCCC GTTCTTCATCTCAAT Dhaf_2241 2419807 - 2420220 + | hypothetical protein TERM 3369 2420802 - 2420784 - g 73 -10.4 -3.22491 | opp_overlap 2420782 AAATCGCAGCAGGAA CTTACTAC ACA GTAGTAAG CGGTGATTTTTTCTG Dhaf_2242 2420582 - 2421586 + | Peptidoglycan-binding LysM TERM 3370 2421647 - 2421602 - T 100 -13.5 -2.91334 | opp_overlap 2421610, overlap 2421606 2421608 2421609 CATAGCAGATAATTA CAAAGAGTTGCCTTGAATTGG TTGT CCAATTCAAGGCATTTTTTTG CGCTAAATACCCCGC TERM 3371 2421643 - 2421606 - T 79 -8.5 -4.12397 | opp_overlap 2421610, overlap 2421602 2421608 2421609 GCAGATAATTACAAA GAGTTGCCTTGAATTGG TTGT CCAATTCAAGGCATTTT TTTGCGCTAAATACC TERM 3372 2421641 - 2421608 - T 84 -11.1 -3.64959 | opp_overlap 2421610, overlap 2421606 2421602 2421609 AGATAATTACAAAGA GTTGCCTTGAATTGG TTGT CCAATTCAAGGCATT TTTTTGCGCTAAATA TERM 3373 2421640 - 2421609 - T 100 -14.6 -2.77891 | opp_overlap 2421610, overlap 2421608 2421606 2421602 GATAATTACAAAGAG TTGCCTTGAATTGG TTGT CCAATTCAAGGCAT TTTTTTGCGCTAAAT TERM 3374 2421610 - 2421639 + T 100 -18.1 -5.44119 | opp_overlap 2421609 2421608 2421606 2421602 ATAATTACAAAGAGT TGCCTTGAATTGG TTGT CCAATTCAAGGCA TTTTTTTGCGCTAAA Dhaf_2243 2422092 - 2421772 - | Sterol-binding domain protein TERM 3375 2422331 - 2422285 - H 100 -14.8 -4.4084 | opp_overlap 2422285 AATGACACAGGAAAA GATTATAATGTTGCATAGCAAA CAA TTCGTTGTGCAACATTATAATC TTATTGGCATAGAGA TERM 3376 2422285 - 2422331 + H 100 -17 -3.65046 | opp_overlap 2422285 AATGACACAGGAAAA GATTATAATGTTGCATAGCAAA CAA TTCGTTGTGCAACATTATAATC TTATTGGCATAGAGA Dhaf_2244 2422292 - 2422834 + | transcriptional regulator, MarR family TERM 3377 2422898 - 2422878 - g 93 -7.6 -5.1861 | gap 1, opp_overlap 2422893 TCTATGATTAAAAAA CTGGCCGGA AGTA TCCGGC-AG TACAAGAAAGCCACT TERM 3378 2422893 - 2422925 + G 91 -6.4 -5.33866 | gap 2, opp_overlap 2422878 2422904 CTGGCCGGAAGTATC CGGCAGTACAAGAAAG CCA CTCTCTTG-AC-GCCG TTTTTTGTGGCTTTG Dhaf_2245 2422866 - 2424614 + | ABC transporter related TERM 3379 2426068 - 2426050 - g 74 -3.1 -5.17786 | gap 1 CAATAAAATCAAAAA GGAG-GAC TTGC GCCGCTCC TTAGGTATCGTGCTC Dhaf_2246 2424611 - 2426563 + | ABC transporter related Dhaf_2247 2427421 - 2426567 - | ABC transporter permease TERM 3380 2426986 - 2426944 - G 73 -10.6 -3.18849 | overlap 2426942 2426947 GGGATAGGACGAATA TCAGCCCGCCTTGAAC AACAGAGGAAG GTTCAAGGCGGGCGGC AATATCCCCACCGGT TERM 3381 2426983 - 2426947 - G 95 -15.3 -2.78762 | overlap 2426944 2426942 ATAGGACGAATATCA GCCCGCCTTGAAC AACAGAGGAAG GTTCAAGGCGGGC GGCAATATCCCCACC Dhaf_2248 2428352 - 2427405 - | ABC transporter related TERM 3382 2428365 - 2428420 + r 88 -10.7 -3.8698 | gap 1, opp_overlap 2428375 2428376 2428382, overlap 2428374 2428376 CATAAGCCACCTCAT TGCTTGATAA-GCCTAAAGAGCAGCC GGTGG GGCTGCCCTTTAGGTATTATGAAGGA TTTAAATTTGGCTTG TERM 3383 2428374 - 2428410 + r 86 -11.6 -3.32294 | opp_overlap 2428375 2428376 2428382, overlap 2428365 2428376 CCTCATTGCTTGATA AGCCTAAAGAGCAGCC GGTGG GGCTGCCCTTTAGGTA TTATGAAGGATTTAA TERM 3384 2428409 - 2428375 - R 100 -15.1 -3.29511 | opp_overlap 2428374 2428365 2428376, overlap 2428376 2428382 CTCATTGCTTGATAA GCCTAAAGAGCAGCC GGTGG GGCTGCCCTTTAGGT ATTATGAAGGATTTA TERM 3385 2428376 - 2428408 + r 100 -16.4 -3.22668 | opp_overlap 2428376 2428375 2428382, overlap 2428374 2428365 TCATTGCTTGATAAG CCTAAAGAGCAGCC GGTGG GGCTGCCCTTTAGG TATTATGAAGGATTT TERM 3386 2428408 - 2428376 - R 100 -18.6 -2.57564 | opp_overlap 2428374 2428365 2428376, overlap 2428375 2428382 TCATTGCTTGATAAG CCTAAAGAGCAGCC GGTGG GGCTGCCCTTTAGG TATTATGAAGGATTT TERM 3387 2428402 - 2428382 - R 82 -10.4 -3.69354 | opp_overlap 2428376 2428374 2428365, overlap 2428376 2428375 CTTGATAAGCCTAAA GAGCAGCC GGTGG GGCTGCCC TTTAGGTATTATGAA Dhaf_2249 2429660 - 2428422 - | putative transmembrane anti-sigma factor Dhaf_2250 2430217 - 2429660 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 3388 2431047 - 2431028 - g 71 -4.9 -4.62783 | opp_overlap 2431040 GACCTATTGGAAAAA GTGCCGG TGGAAG CCTGCAC TTGGGCTATATTTCC Dhaf_2251 2430377 - 2431240 + | transcriptional regulator, AraC family Dhaf_2252 2431334 - 2432050 + | protein of unknown function DUF169 Dhaf_2253 2433394 - 2432066 - | Nitric-oxide reductase TERM 3389 2432715 - 2432735 + g 77 -6.9 -4.62471 | opp_overlap 2432715, overlap 2432704 CCGATCACTGAGAGA GTGGCTT CTAAGTA AAGCCAC TTTTCTATATCCCTT TERM 3390 2432918 - 2432952 + g 100 -4.3 -5.88476 | gap 1, opp_overlap 2432907 2432918 2432917 2432915, overlap 2432920 CACACAGAGAAACAC TG-CCCCTACTGCC ATAATTCC GGCAGCAGGGGTTA TTTTTTGTTTGTTTT TERM 3391 2432920 - 2432949 + g 100 -10.7 -4.9072 | opp_overlap 2432918 2432917 2432915, overlap 2432918 CACAGAGAAACACTG CCCCTACTGCC ATAATTCC GGCAGCAGGGG TTATTTTTTGTTTGT Dhaf_2254 2433792 - 2433391 - | hypothetical protein TERM 3392 2433942 - 2433917 - R 100 -16.1 -4.78077 | overlap 2433918 TTTAAGCAAAATAAA TCCCCGGCTGC TTGT GCAGCCGGGGT CAGACGCTAAATCTT TERM 3393 2433941 - 2433918 - R 100 -19.6 -3.45762 | overlap 2433917 TTAAGCAAAATAAAT CCCCGGCTGC TTGT GCAGCCGGGG TCAGACGCTAAATCT Dhaf_2255 2434357 - 2434016 - | prevent-host-death family protein Dhaf_2256 2435330 - 2434365 - | inner-membrane translocator TERM 3394 2434842 - 2434824 - G 72 -6 -4.36914 | GCGCGTCTTATAAAA GATGATCG CGG CGATAATC AGGAAAAGGAAACCG Dhaf_2257 2436562 - 2435333 - | inner-membrane translocator Dhaf_2258 2438096 - 2436552 - | ABC transporter related TERM 3395 2437847 - 2437869 + g 80 -12 -2.77167 | AATGCTGATGGACCA TGCCGATGCC TAA GGCATTGGCG TCATTGGGGTTGTTG TERM 3396 2438166 - 2438143 - R 100 -16.8 -3.97308 | opp_overlap 2438136 TGTAAATAGAGGAAA GGGGAAAGGG TAGT CCCTTTCCCC GATCAAGTGCTGTTT Dhaf_2259 2439369 - 2438185 - | basic membrane lipoprotein TERM 3397 2438560 - 2438574 + g 77 -4.2 -5.03145 | ATAGCGTTGGTCAAC GTCAAC ACC GATGAC TTTTTTACCGGCTTC TERM 3398 2439633 - 2439596 - R 93 -4.3 -5.83211 | gap 1, opp_overlap 2439596 GAGCAAAAGAAAAAA GAAGGCA-GGAGTATC GTTGATG AATACTTCATGCCTTC TTCAATTAATTAGAG Dhaf_2260 2440155 - 2439643 - | Ferritin Dps family protein Dhaf_2261 2440384 - 2441187 + | SNARE associated Golgi protein TERM 3399 2441210 - 2441191 - f 75 -5.8 -4.67234 | ATTCAACGGTAAAAA CAAAGAAT AATT ACTCTTTG ATAGGATTTTCACTT Dhaf_2262 2441300 - 2441719 + | hemerythrin-like metal-binding protein Dhaf_2263 2441716 - 2442174 + | CheC domain protein TERM 3400 2442195 - 2442229 + F 100 -14.5 -4.87807 | opp_overlap 2442199 CCAGCCCTATGAGTA TCAAGCCCTATTCAT GGCAA ATGAACAGGGCTTGA TTTTTACTATGTTGA TERM 3401 2442225 - 2442199 - f 84 -11.7 -3.23216 | opp_overlap 2442195 CCCTATGAGTATCAA GCCCTATTCAT GGCAA ATGAACAGGGC TTGATTTTTACTATG TERM 3402 2442377 - 2442387 + G 82 -5.4 -5.00851 | TGACCATACATAATT TGCT TTC AGCA TTTTCTTTACTTGCT TERM 3403 2442531 - 2442549 + G 71 -4.4 -4.67641 | TGCCTTTGCTTATCT GGCTCAGG ATG CCTTCGCC TTTTCCTTTTGGAAT TERM 3404 2443126 - 2443102 - g 82 -12.2 -3.21099 | GTGGCGGACCAGGAA GGCCGGATAC GGAAG GTATCCAGCC AGATGAAAGCCTTGC Dhaf_2264 2442361 - 2444520 + | diguanylate cyclase and metal dependent phosphohydrolase TERM 3405 2445038 - 2445014 - f 100 -13.7 -3.89822 | overlap 2445025 CACGCAGCGGAGAAA GGTTGGAAACA GGA CGTTTCCAACC GCCCATTGAGCAGGA TERM 3406 2447161 - 2447173 + G 77 -4.1 -5.04385 | GCTGGGTTATGTGGT CAGCA ATA TGTTG TTTTTTGAGGATCTG Dhaf_2265 2445260 - 2447722 + | ABC transporter related Dhaf_2266 2447778 - 2448548 + | ADP-ribosylation/Crystallin J1 TERM 3407 2448564 - 2448591 + F 100 -17.2 -4.67982 | opp_overlap 2448567 CCCTTCACTGGTCCA TAAGCCATCCTG AGCT CAGGATGGCTTA TTTTGTTGCCTCAGA TERM 3408 2448588 - 2448567 - f 100 -14.5 -3.29511 | opp_overlap 2448564 TTCACTGGTCCATAA GCCATCCTG AGCT CAGGATGGC TTATTTTGTTGCCTC Dhaf_2267 2448734 - 2449633 + | protein of unknown function DUF161 TERM 3409 2449739 - 2449701 - f 100 -18.4 -4.54323 | opp_overlap 2449701 AAGGATAATAAGAAA GACTTAGTGATCAGGGAA CGG TTCTCTGACCACTAAGTC TTTTATTGTATATTG TERM 3410 2449701 - 2449739 + F 100 -18.4 -4.90002 | opp_overlap 2449701 AAGGATAATAAGAAA GACTTAGTGATCAGGGAA CGG TTCTCTGACCACTAAGTC TTTTATTGTATATTG TERM 3411 2451917 - 2451902 - g 76 -9 -3.91488 | AAGGCTTTGAAACAA TTGCCG TGAT CGGCAA GACCTTTGCGGACTG Dhaf_2268 2449945 - 2452206 + | ATP-dependent DNA helicase replicase Dhaf_2269 2452304 - 2452660 + | arsenate reductase and related TERM 3412 2452673 - 2452711 + F 100 -12.7 -5.00884 | gap 1, opp_overlap 2452677 2452678, overlap 2452669 2452677 TAAGGCCGGCACTGA CAAACTCAGTAT-CCTGA TTAA TCGGGGATACTGGGTTTG TTTTTTGCACAGAGT TERM 3413 2452677 - 2452707 + F 95 -7.7 -5.04249 | gap 1, opp_overlap 2452677 2452678, overlap 2452669 2452673 GCCGGCACTGACAAA CTCAGTAT-CCTGA TTAA TCGGGGATACTGGG TTTGTTTTTTGCACA TERM 3414 2453212 - 2453224 + G 81 -3.4 -5.39755 | GCTGGCTTTATTGCT GACA TCGGT TGTC TTTTTTATCATTGTC TERM 3415 2453384 - 2453398 + G 75 -5.7 -4.59853 | opp_overlap 2453383 2453384 AGCAGCTATACCAAT CCCTT TTCCC AAGGG TTTTTAGAAGGTTAC Dhaf_2270 2452841 - 2454154 + | branched-chain amino acid transport system II carrier protein TERM 3416 2454216 - 2454194 - f 70 -9.2 -2.79175 | opp_overlap 2454194, overlap 2454193 2454196 AATTCTCAGGTAAAG CAGAACTCTT TTT AAGGGTTCTG TTTTCTTTACACTGT TERM 3417 2454194 - 2454216 + F 100 -11.4 -4.89521 | opp_overlap 2454193 2454194 2454196 AATTCTCAGGTAAAG CAGAACTCTT TTT AAGGGTTCTG TTTTCTTTACACTGT TERM 3418 2454316 - 2454330 + F 71 -3.4 -4.99043 | opp_overlap 2454317 2454318, overlap 2454317 2454318 AGTATAGGCTTAAAG ATCGGC GAA GCCGGG TTTTCTTTATGAAAA TERM 3419 2454465 - 2454447 - g 71 -3 -4.85599 | overlap 2454450 GGGAGTCGATAAAAA GACCTATG TGG CTTTGGTC ACAGAGTATAAAAGC Dhaf_2271 2454412 - 2454927 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 3420 2456106 - 2456090 - g 76 -2.2 -5.25772 | overlap 2456095 AAAGGAGAAGAAAAA GCTAAC CTGGT GTTTGC CACCAAAGTCATGGG Dhaf_2272 2454914 - 2456338 + | hypothetical protein TERM 3421 2456547 - 2456533 - g 77 -4.2 -5.02715 | overlap 2456534 2456535 2456537 ACAGCAAACCAAAAA GCCATC TTC GATGCC TCAATGAAGATGCAA Dhaf_2273 2456449 - 2458089 + | Peptidoglycan-binding LysM TERM 3422 2458157 - 2458125 - f 83 -10.8 -3.55815 | gap 1, opp_overlap 2458125, overlap 2458115 2458113 AAAGACTGCTTTAAA GAGAGTGAATCTACC TTCG GGTAAAT-CACTCTC TTTTGGCAATTTATG TERM 3423 2458125 - 2458157 + F 79 -8.6 -4.18161 | gap 1, opp_overlap 2458115 2458113 2458125 AAAGACTGCTTTAAA GAGAGTGAATCTACC TTCG GGTAAA-TCACTCTC TTTTGGCAATTTATG Dhaf_2274 2458398 - 2458706 + | hypothetical protein TERM 3424 2458723 - 2458770 + F 100 -20.3 -2.87211 | gap 1, opp_overlap 2458726 2458730, overlap 2458726 2458730 TTCGGTTATCTATTA TAACG-AAGCCCCTCAGGATAT GTTTG ATATCTTGAGGGGCTTTCGTTA TATATAAAAAAAGAT TERM 3425 2458726 - 2458767 + F 100 -17.6 -3.58726 | gap 1, opp_overlap 2458726 2458730, overlap 2458723 2458730 GGTTATCTATTATAA CG-AAGCCCCTCAGGATAT GTTTG ATATCTTGAGGGGCTTTCG TTATATATAAAAAAA TERM 3426 2458767 - 2458726 - f 100 -15.4 -3.4252 | gap 1, opp_overlap 2458726 2458723 2458730, overlap 2458730 GGTTATCTATTATAA CG-AAGCCCCTCAGGATAT GTTTG ATATCTTGAGGGGCTTTCG TTATATATAAAAAAA TERM 3427 2458730 - 2458762 + F 100 -17.2 -4.06361 | opp_overlap 2458730 2458726, overlap 2458726 2458723 ATCTATTATAACGAA GCCCCTCAGGATAT GTTTG ATATCTTGAGGGGC TTTCGTTATATATAA TERM 3428 2458762 - 2458730 - f 100 -15 -3.4759 | opp_overlap 2458726 2458723 2458730, overlap 2458726 ATCTATTATAACGAA GCCCCTCAGGATAT GTTTG ATATCTTGAGGGGC TTTCGTTATATATAA TERM 3429 2458832 - 2458794 - f 100 -13.5 -3.81154 | opp_overlap 2458795, overlap 2458785 2458795 AAAAGATTGACTAAA CGTTCATAGTGTATATA ATGAA TATATACACTATGAACT TAGATAACAGGGAGG TERM 3430 2458795 - 2458831 + F 100 -17 -3.05384 | opp_overlap 2458795 2458794 2458785 AAAGATTGACTAAAC GTTCATAGTGTATATA ATGAA TATATACACTATGAAC TTAGATAACAGGGAG TERM 3431 2458831 - 2458795 - f 100 -17 -2.87608 | opp_overlap 2458795, overlap 2458794 2458785 AAAGATTGACTAAAC GTTCATAGTGTATATA ATGAA TATATACACTATGAAC TTAGATAACAGGGAG Dhaf_2275 2458855 - 2459235 + | transcriptional regulator, GntR family Dhaf_2276 2459236 - 2460084 + | ABC transporter related Dhaf_2277 2460081 - 2460704 + | transporter protein TERM 3432 2460742 - 2460771 + F 91 -7.9 -4.78848 | opp_overlap 2460743, overlap 2460743 GAGCCGTTGAAGAGG AGGATCTTTGGAC TGAT GTTCAGAGATCCC TTTTGTGTTTGAGGA TERM 3433 2460743 - 2460770 + F 89 -11.4 -3.46586 | opp_overlap 2460743, overlap 2460742 AGCCGTTGAAGAGGA GGATCTTTGGAC TGAT GTTCAGAGATCC CTTTTGTGTTTGAGG TERM 3434 2461151 - 2461172 + G 73 -10.1 -3.14564 | CATGAAACATCTGGG GCGGCTGAC GATG GTCAGCCGG TTGCTGAGAAAATCG TERM 3435 2461745 - 2461755 + G 74 -6.8 -4.3898 | CCTGTGAGCCTGGTG GTGC CCT GCAC TTTTATGACACTGCT Dhaf_2278 2460863 - 2462476 + | GerA spore germination protein Dhaf_2279 2462478 - 2463563 + | spore germination protein TERM 3436 2463959 - 2463976 + G 71 -4.9 -4.55295 | CGCTTGCCCTTCTCC CGTATCA GTGT TGATATG TTTGTTTGTGAAGGG Dhaf_2280 2463560 - 2464735 + | germination protein, Ger(x)C family TERM 3437 2465486 - 2465500 + G 83 -11.4 -3.58343 | opp_overlap 2465462 CCGGGGCAGCCTGAT CGGCTC CTG GAGCCG TTTAGCGGTGGTGGC TERM 3438 2465903 - 2465889 - g 71 -2.8 -4.88228 | ATGGAACAGCAAAAA GGAG ATGCTGG CTCC ATGTCCTCTATTCTC Dhaf_2281 2464857 - 2466095 + | drug resistance transporter, Bcr/CflA subfamily TERM 3439 2466372 - 2466350 - g 73 -3.4 -4.8622 | TGCCGCAAGGAAAAA CCCTTTAATT TAG AGTTGAAGGG TCTGGGAGTATTCGG TERM 3440 2466483 - 2466464 - g 83 -5 -5.24129 | gap 1, opp_overlap 2466480, overlap 2466465 2466466 TCCCTCCATAAAAAA GTGGATCAG GTT CTGACCC-C TCTGGGCTTTCCTCC Dhaf_2282 2466128 - 2466694 + | 2'-5' RNA ligase TERM 3441 2466766 - 2466738 - T 93 -11 -4.20531 | opp_overlap 2466738 CATATGCATGCAAAA GGAGCCGCGACA GCAGT TGTTGCAGCTCC TTTATTCATATCTCA TERM 3442 2466738 - 2466766 + T 100 -11.7 -4.31293 | opp_overlap 2466738 CATATGCATGCAAAA GGAGCCGCGACAG CAG TTGTTGCAGCTCC TTTATTCATATCTCA Dhaf_2283 2467402 - 2466803 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Dhaf_2284 2468120 - 2467449 - | cytochrome c biogenesis protein transmembrane region Dhaf_2285 2469736 - 2468204 - | histidine kinase TERM 3443 2468729 - 2468711 - G 71 -4.6 -4.58283 | CAAGTGCTGCAAAAA GATGCT TTCCTTG AGCATC TGCCGATGGTAGGCC TERM 3444 2469178 - 2469216 + g 86 -13.8 -3.01712 | CACCGACCACTTTTT CCCCGGCTTTGATGGGGG CTC CCACAGTCAAGGTCGGGG TATTGAGAAGGGAAC TERM 3445 2469579 - 2469598 + g 71 -4.2 -4.70659 | overlap 2469581 AAGGTTGAGAGTGTT CCGGCAAT AGAG GTTGCCCG TTTTTCCATGTCAAC Dhaf_2286 2470421 - 2469726 - | two component transcriptional regulator, winged helix family TERM 3446 2470337 - 2470352 + g 77 -4 -5.09173 | gap 1, opp_overlap 2470339, overlap 2470339 CATCCCAGGCTATAT G-AGGCT GAT AGCCTTC TTTTTTCGCATATTC TERM 3447 2470339 - 2470349 + g 77 -6.8 -4.63089 | opp_overlap 2470339, overlap 2470337 TCCCAGGCTATATGA GGCT GAT AGCC TTCTTTTTTCGCATA Dhaf_2287 2470585 - 2471031 + | hypothetical protein TERM 3448 2471092 - 2471057 - T 100 -16.2 -2.98491 | opp_overlap 2471058 AAGGCACATTATACA GGCAGGCTGTAAGGGC ATAG GTCCTTACAGCCTGCT TTAATTTAATGTAAC TERM 3449 2471058 - 2471091 + T 100 -21.9 -4.12738 | opp_overlap 2471057 AGGCACATTATACAG GCAGGCTGTAAGGGC ATAG GTCCTTACAGCCTGC TTTAATTTAATGTAA Dhaf_2288 2471801 - 2471130 - | uracil-DNA glycosylase TERM 3450 2471234 - 2471220 - G 78 -5.6 -5.00616 | CTTGCTGCCAAAAAA TCCGGC ATG GGCGGA AAGTGGGCTGGGATG TERM 3451 2471977 - 2471954 - H 72 -7.6 -3.8297 | AACAAAAATGTCAAA GCTCAAATTT AGCT AAATTTAAGC AAATAGACCCGAAAT TERM 3452 2472086 - 2472035 - H 84 -3.9 -5.46276 | gap 1, opp_overlap 2472034, overlap 2472037 AATACACATAAAAAA TCCTTATAATAAGAGA-TAGGGTA GTCCT TGCCCAAATCTCAAATTATAAGGA GATTTAAAATGCAGG TERM 3453 2473218 - 2473205 - g 77 -4.5 -4.83615 | GAGTTTTTAGAAAAA CTCCG ACGA CGAAG AAGGAAAGCTGCCAA Dhaf_2289 2472095 - 2473339 + | transposase IS4 family protein Dhaf_2290 2473536 - 2476463 + | diguanylate cyclase/phosphodiesterase Dhaf_2291 2476525 - 2476953 + | hypothetical protein Dhaf_2292 2477112 - 2477492 + | hypothetical protein Dhaf_2293 2477489 - 2477878 + | mutator MutT protein Dhaf_2294 2478912 - 2477860 - | protein of unknown function DUF6 transmembrane TERM 3454 2479068 - 2479038 - R 100 -11.1 -4.52415 | gap 1, opp_overlap 2479038 ATGGATAATAATAAA GCACGAGTCCCCCC TGGC GGGCGG-CCCGTGC TTATTGGTAAAGCCG TERM 3455 2479038 - 2479068 + r 82 -10.3 -3.71848 | opp_overlap 2479038 ATGGATAATAATAAA GCACGAGTCCCCC CTGGC GGGCGGCCCGTGC TTATTGGTAAAGCCG Dhaf_2295 2479586 - 2479092 - | Rubrerythrin TERM 3456 2479994 - 2480021 + H 100 -10.6 -4.86385 | overlap 2479997 GAGCAATATGACTTT TGCGGCCTGAGT ACCA ACTCAGGTCTCA TTTATTTTTCACAAT TERM 3457 2479997 - 2480018 + H 81 -10.9 -3.31668 | overlap 2479994 CAATATGACTTTTGC GGCCTGAGT ACCA ACTCAGGTC TCATTTATTTTTCAC TERM 3458 2480840 - 2480823 - g 74 -2.6 -5.02074 | GTAGGGGTGAAAAAA GGCAGC GAACTT ACCGCC AAAATCAATGAGATC Dhaf_2296 2480082 - 2480930 + | extracellular solute-binding protein family 3 TERM 3459 2480974 - 2481006 + F 79 -10.7 -3.01831 | opp_overlap 2480968 2480979, overlap 2480979 GGGAATAATGTTTTA TAAAACCGGCTACAT TCA ATGCAGTCGGTTTTG TCCTGTTTTTGAAAA TERM 3460 2480979 - 2481001 + F 91 -8.4 -4.62069 | opp_overlap 2480979, overlap 2480974 TAATGTTTTATAAAA CCGGCTACAT TCA ATGCAGTCGG TTTTGTCCTGTTTTT TERM 3461 2481001 - 2480979 - f 82 -8.4 -4.386 | opp_overlap 2480974 2480979 TAATGTTTTATAAAA CCGGCTACAT TCA ATGCAGTCGG TTTTGTCCTGTTTTT Dhaf_2297 2481070 - 2481828 + | polar amino acid ABC transporter, inner membrane subunit TERM 3462 2482313 - 2482298 - g 73 -5.4 -4.62069 | overlap 2482301 TCGGGAGGGCAAAAA CAACGG GTAG CCATTG CCCGGGCTCTGTCCA Dhaf_2298 2481863 - 2482606 + | ABC transporter related TERM 3463 2482657 - 2482621 - T 81 -9.6 -3.90358 | gap 1, opp_overlap 2482622, overlap 2482622 2482624 AGACTAGATATGAAA GCACCCTCAAGACTTTA CTGC CAAAG-CTTGAGGGTGT TTTTTGCCCTAACGG TERM 3464 2482622 - 2482656 + T 100 -12.4 -5.0538 | gap 1, opp_overlap 2482622 2482621 2482624 GACTAGATATGAAAG CACCCTCAAGACTTT ACTGCC AAAG-CTTGAGGGTG TTTTTTGCCCTAACG TERM 3465 2482656 - 2482622 - T 95 -13.1 -2.93492 | gap 1, opp_overlap 2482622, overlap 2482621 2482624 GACTAGATATGAAAG CACCCTCAAGACTTTA CTGC CAAAG-CTTGAGGGTG TTTTTTGCCCTAACG TERM 3466 2482654 - 2482624 - T 73 -9.9 -3.01329 | gap 1, opp_overlap 2482622, overlap 2482622 2482621 CTAGATATGAAAGCA CCCTCAAGACTTTA CTGC CAAAG-CTTGAGGG TGTTTTTTGCCCTAA Dhaf_2299 2484501 - 2482666 - | ABC transporter related TERM 3467 2484770 - 2484726 - H 83 -9.3 -4.07568 | opp_overlap 2484728, overlap 2484728 TGGCTTGTCTTAAAA GACAAGACTCATGGGTAGTTC TTA AAGCTACCCGTGGGTCTTGTT TTAATTTCGGTGGAT TERM 3468 2484728 - 2484768 + H 100 -17.8 -4.56914 | opp_overlap 2484726 2484728 GCTTGTCTTAAAAGA CAAGACTCATGGGTAGTT CTTAA AGCTACCCGTGGGTCTTG TTTTAATTTCGGTGG TERM 3469 2484768 - 2484728 - H 93 -11.9 -3.63744 | opp_overlap 2484728, overlap 2484726 GCTTGTCTTAAAAGA CAAGACTCATGGGTAGTTC TTA AAGCTACCCGTGGGTCTTG TTTTAATTTCGGTGG TERM 3470 2485049 - 2485068 + G 77 -5 -4.86902 | GAGTCTTATATTACG GCAATCGA CCAT TGGATTGC TTTTATTCTGCTTTC Dhaf_2300 2484851 - 2485411 + | protein of unknown function DUF204 Dhaf_2301 2485502 - 2486179 + | two component transcriptional regulator, winged helix family TERM 3471 2487171 - 2487156 - g 75 -6.2 -4.50058 | overlap 2487150 CATGGACAATTAAAA GTTTCT TTGA AGAAAC GGGGTAAAACCACCT Dhaf_2302 2486172 - 2487398 + | histidine kinase TERM 3472 2487481 - 2487446 - f 86 -10.6 -3.75657 | opp_overlap 2487455 2487473, overlap 2487449 TGAAACAGGTAAGAA GAGTTGAAATTCGACA CCAG TGTCGAATTTCATGTC AAGCTCTCCTTCTGC TERM 3473 2487478 - 2487449 - f 76 -10.9 -2.65987 | opp_overlap 2487455 2487473, overlap 2487446 AACAGGTAAGAAGAG TTGAAATTCGACA CCAG TGTCGAATTTCAT GTCAAGCTCTCCTTC TERM 3474 2487455 - 2487472 + F 75 -8.5 -3.83502 | opp_overlap 2487449 2487446 TAAGAAGAGTTGAAA TTCGACA CCAG TGTCGAA TTTCATGTCAAGCTC Dhaf_2303 2487650 - 2488213 + | NADPH-dependent FMN reductase TERM 3475 2488560 - 2488548 - g 74 -4.1 -4.93365 | overlap 2488541 CTGGACAATGAAAAA GAAAG CAT CCTTC TCTATCAAAAATGCT Dhaf_2304 2488248 - 2488733 + | Rubrerythrin TERM 3476 2488805 - 2488769 - f 100 -12.3 -4.88388 | opp_overlap 2488769 ATAAGTGTATAAAAA GAACCACGAGGCTGTGC TCA GGACAGATTCGTGGTTC TTTTTATATAAAGGC TERM 3477 2488769 - 2488805 + F 100 -14.5 -4.96848 | opp_overlap 2488769 ATAAGTGTATAAAAA GAACCACGAGGCTGTGC TCA GGACAGATTCGTGGTTC TTTTTATATAAAGGC Dhaf_2305 2488964 - 2489692 + | hypothetical protein TERM 3478 2489727 - 2489737 + G 77 -8.2 -4.18494 | TTGAATATAGAGGCT GCCG GAA CGGC TTTTCCCTGGCAATC Dhaf_2306 2489685 - 2490383 + | hypothetical protein Dhaf_2307 2490383 - 2492317 + | hypothetical protein TERM 3479 2492365 - 2492413 + T 80 -6.1 -4.76892 | gap 4, opp_overlap 2492365, overlap 2492407 2492409 ATTAGCTAGTTAAAA CCCCCTG-GGC-T-ATC-CCGGTGC ATT GCACTGGAGGGGATGCCGCAGGGGG TTTTTAACTTCCTAT Dhaf_2308 2493321 - 2492425 - | Substrate-binding region of ABC-type glycine betaine transport system Dhaf_2309 2494190 - 2493351 - | binding-protein-dependent transport systems inner membrane component Dhaf_2310 2495404 - 2494190 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 3480 2495065 - 2495084 + g 73 -2.1 -5.1383 | GAAGGAGGGCAAATT GCTGG AAGACCATGC CCAGC TTTTTCTGTCTTGTT TERM 3481 2495321 - 2495344 + g 71 -3 -4.98255 | CTGCTCCTTGCTCAA GCCTTTGGCC AAAA GATCCAAGGC TTTTTGTGGTTGAGG TERM 3482 2495874 - 2495844 - g 71 -4.8 -4.56133 | gap 1, opp_overlap 2495840 2495845 2495846 2495847, overlap 2495845 2495846 TTTGAAGAAGGAAAA CGCTTGTCAGCTC TATACG GAGCTGACAAT-G TCTATGATTTTAGTT TERM 3483 2495847 - 2495872 + G 84 -12.7 -3.10531 | opp_overlap 2495846 2495844 2495845, overlap 2495846 2495845 2495840 GAAGAAGGAAAACGC TTGTCAGCTCT ATAC GGAGCTGACAA TGTCTATGATTTTAG TERM 3484 2496131 - 2496157 + G 79 -2.3 -5.41143 | gap 1 AACCCTGCTCAACCC GGAGGATGAGGT GCTT ACCTT-TGCTCC TTTTTTTGGCGAGTA TERM 3485 2496530 - 2496507 - g 76 -8.9 -3.83502 | opp_overlap 2496506 2496503 TATTCCTACAGCAAA TCCCTCTCC TTACCG GGAGAGAGA ATCGGTTATCTGGTG Dhaf_2311 2495772 - 2496968 + | aminotransferase class I and II TERM 3486 2497027 - 2497075 + F 81 -4.2 -5.27335 | opp_overlap 2497019 2497031 2497066, overlap 2497031 CTGAAACGTCATTAT AAAACAAAGACTTACTCT AAAACGTAAGAAA AGAGTAAGTTTTTGTTTA TTTTTATTTAAGAAA TERM 3487 2497031 - 2497071 + F 80 -5 -5.12987 | opp_overlap 2497019 2497031 2497066, overlap 2497027 AACGTCATTATAAAA CAAAGACTTACTCT AAAACGTAAGAAA AGAGTAAGTTTTTG TTTATTTTTATTTAA Dhaf_2312 2497154 - 2499463 + | putative cell wall binding repeat 2-containing protein TERM 3488 2499482 - 2499502 + F 93 -11.2 -4.15029 | opp_overlap 2499476 ATAGACAGACCGTAA CCCGAAGA CCATC TCTTCGGG TTCTTTATCTGGAGT TERM 3489 2501193 - 2501183 - g 71 -6.8 -4.22535 | opp_overlap 2501180 AGAATTTCAAAAGAA GCTG AAT CAGC ACCTGTTTGAGAAGA TERM 3490 2501468 - 2501481 + G 71 -3.8 -4.72497 | AGCGGAGGAACAGGG CACC CTTCTT GGTG TTTTATTCCTCGATA Dhaf_2313 2499717 - 2502662 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3491 2502708 - 2502736 + F 100 -11.1 -4.84311 | opp_overlap 2502697 CTAAGCTCGAAAGCG CAGCTGTAGACAG TTA TTGTCTATGGCTG TTTTATTGTCTAAAA TERM 3492 2503638 - 2503615 - g 71 -8.9 -3.56486 | opp_overlap 2503615, overlap 2503613 CATAAAATCGAAAGA GATACCGCC TACAAG GGCGATATC TTTATTATGCAAATG TERM 3493 2503615 - 2503638 + G 76 -7.4 -4.31433 | opp_overlap 2503615 2503613 CATAAAATCGAAAGA GATACCGCCT ACAA GGGCGATATC TTTATTATGCAAATG Dhaf_2314 2502853 - 2503791 + | degV family protein Dhaf_2315 2503919 - 2504281 + | DNA polymerase beta domain protein region TERM 3494 2504523 - 2504466 - g 80 -6.3 -4.77173 | opp_overlap 2504467 2504473, overlap 2504467 2504473 CTGTTAGAAAATAAA TTTAAAACACCTGTGTTGTTAAACGGA GAGA TCCGGCTGGCACCACAGGTGTTTTTAT TCATAAGAAAAGGGT TERM 3495 2504522 - 2504467 - g 74 -9.8 -3.45581 | opp_overlap 2504467 2504473, overlap 2504466 2504473 TGTTAGAAAATAAAT TTAAAACACCTGTGTTGTTAAACGGA GAGA TCCGGCTGGCACCACAGGTGTTTTTA TTCATAAGAAAAGGG TERM 3496 2504467 - 2504522 + G 82 -12 -3.14132 | opp_overlap 2504466 2504467 2504473, overlap 2504473 TGTTAGAAAATAAAT TTAAAACACCTGTGTTGTTAAACGGA GAGA TCCGGCTGGCACCACAGGTGTTTTTA TTCATAAGAAAAGGG TERM 3497 2504473 - 2504516 + G 100 -11 -5.1356 | opp_overlap 2504473 2504467 2504466, overlap 2504467 AAAATAAATTTAAAA CACCTGTGTTGTTAAACGGA GAGA TCCGGCTGGCACCACAGGTG TTTTTATTCATAAGA TERM 3498 2504516 - 2504473 - g 80 -8.8 -4.46617 | opp_overlap 2504467 2504473, overlap 2504467 2504466 AAAATAAATTTAAAA CACCTGTGTTGTTAAACGGA GAGA TCCGGCTGGCACCACAGGTG TTTTTATTCATAAGA Dhaf_2316 2504442 - 2504549 + | hypothetical protein Dhaf_2317 2504607 - 2505524 + | RarD protein, DMT superfamily transporter Dhaf_2318 2506648 - 2505575 - | hypothetical protein TERM 3499 2506874 - 2506892 + G 75 -5.9 -4.49556 | opp_overlap 2506873 GAGAAATTAAAGGAT CTGCCGG AGCAG CCGGGAG TTTATTTAATGCAGG Dhaf_2319 2506835 - 2507965 + | Excinuclease ABC C subunit domain protein Dhaf_2320 2507946 - 2508410 + | hypothetical protein Dhaf_2321 2508478 - 2508777 + | Domain of unknown function DUF1905 Dhaf_2322 2509458 - 2508763 - | Domain of unknown function DUF1905 Dhaf_2323 2510327 - 2509458 - | transcriptional regulator, AraC family TERM 3500 2510511 - 2510522 + G 85 -3 -5.56264 | GTCTATTATGCAGTG GAAA CGGA TTTC TTTTTTGTCTTTAAC Dhaf_2324 2510503 - 2512119 + | cell wall hydrolase/autolysin TERM 3501 2512181 - 2512137 - f 100 -19.6 -3.92832 | gap 1, opp_overlap 2512140 2512151, overlap 2512140 AAACCCGGCAAAGAA GAGGGAGCCGCAA-ACGTTTA GGCA TAAACGTTTTGCGGCTCCTTC CTTAGGTATAGGTTG TERM 3502 2512178 - 2512140 - f 100 -19.9 -2.72371 | gap 1, opp_overlap 2512140 2512151, overlap 2512137 CCCGGCAAAGAAGAG GGAGCCGCAA-ACGTTTA GGCA TAAACGTTTTGCGGCTCC TTCCTTAGGTATAGG TERM 3503 2512140 - 2512178 + F 100 -19.9 -3.39142 | gap 1, opp_overlap 2512140 2512137, overlap 2512151 CCCGGCAAAGAAGAG GGAGCCGCAA-ACGTTTA GGCA TAAACGTTTTGCGGCTCC TTCCTTAGGTATAGG Dhaf_2325 2512465 - 2512683 + | hypothetical protein Dhaf_2326 2513172 - 2512702 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 3504 2513266 - 2513313 + H 100 -21.8 -3.36327 | opp_overlap 2513271 2513279 AGCTGGGTGTTTTTA TTATATGCTAAGAGTGTACC CGTTAAAA GGTACACTCTTAGCATATAA TTATGGGTACACTGA TERM 3505 2513308 - 2513271 - H 100 -18 -2.78384 | opp_overlap 2513266, overlap 2513279 GGTGTTTTTATTATA TGCTAAGAGTGTACCC GTTAAA AGGTACACTCTTAGCA TATAATTATGGGTAC TERM 3506 2513692 - 2513665 - g 87 -6.4 -5.06585 | gap 1, opp_overlap 2513665, overlap 2513657 GAAAGCAGAGAAAAA GCTTCCCTA-TGA TTT TCAATACGGAAGC TTTCCTGAGGAGTAC Dhaf_2327 2513348 - 2514772 + | transcriptional regulator, GntR family with aminotransferase domain TERM 3507 2514849 - 2514880 + F 75 -5.1 -4.82901 | overlap 2514850 2514854 ATTTGCCTCATGGCT CGCTGGCTTCCAT TTATGC ATGGAAGCTTGCC TTTTTATAGCAGCAG TERM 3508 2514850 - 2514879 + F 71 -8.6 -3.49419 | overlap 2514849 2514854 TTTGCCTCATGGCTC GCTGGCTTCCAT TTATGC ATGGAAGCTTGC CTTTTTATAGCAGCA TERM 3509 2514854 - 2514875 + F 73 -8.8 -3.49077 | overlap 2514850 2514849 CCTCATGGCTCGCTG GCTTCCAT TTATGC ATGGAAGC TTGCCTTTTTATAGC Dhaf_2328 2514920 - 2515864 + | Domain of unknown function DUF1848 TERM 3510 2516002 - 2516034 + T 87 -8.3 -4.52589 | opp_overlap 2516002 2515997 GGGAAGATAACAAAA GACGGCGGCTGGTTT AAA ATGCCAGAAGCCGTC TTTTCTGTAAACAGG TERM 3511 2516034 - 2516002 - T 80 -6.2 -4.90381 | opp_overlap 2516002, overlap 2515997 GGGAAGATAACAAAA GACGGCGGCTGG TTTAAAATG CCAGAAGCCGTC TTTTCTGTAAACAGG Dhaf_2329 2516458 - 2516141 - | plasmid stabilization system TERM 3512 2516424 - 2516387 - G 100 -19.3 -3.85698 | gap 1 TTTTTGTGCCAGAAA CCGAACATGGCCCGCCAG CAT CTGACGGGC-ACGTTCGG AGACAATTACCTTAT Dhaf_2330 2516726 - 2516451 - | prevent-host-death family protein Dhaf_2331 2518073 - 2516853 - | transcriptional regulator, CdaR Dhaf_2332 2518284 - 2518400 + | hypothetical protein TERM 3513 2519455 - 2519438 - g 78 -9.1 -4.07687 | ATGGCGTTCCTAAAA CACCGGC CTGG GCCAGTG AGATCTGCGGGGTTG Dhaf_2333 2518381 - 2521023 + | molybdopterin oxidoreductase Dhaf_2334 2521043 - 2521621 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 3514 2521969 - 2521921 - g 76 -11 -3.1505 | opp_overlap 2521940 ATTAGTCCTCATCAA GCCTGCGGCCAAAGGTGC GGTCAATGCTTTG GCTCCTCTGGCCGCAGTC ATAGGCCTAATCGAT TERM 3515 2522273 - 2522285 + G 83 -4.8 -5.24416 | ATGAGCGGAGTCATG GCCA CGAAA TGGC TTTTTATTCTCCTTG Dhaf_2335 2521625 - 2522503 + | hypothetical protein TERM 3516 2522557 - 2522526 - T 84 -11.7 -3.07534 | gap 2, opp_overlap 2522525 2522524 2522516 2522528, overlap 2522528 2522530 CACATTATATAGAGA GAGAGCCGCTTCACC TGAT GGTG--GCGGCTCTC AGTTTACATATCTTA TERM 3517 2522713 - 2522672 - T 100 -17.5 -3.18582 | opp_overlap 2522672, overlap 2522677 TACGTTATTTAGGAA TCTAAGTCCCTTCCTGC AGGTTCAA GCAGGAGGGGACTTAGA TTTATGGTAGAGGAG TERM 3518 2522672 - 2522713 + T 100 -19.7 -3.96148 | opp_overlap 2522672 2522677 TACGTTATTTAGGAA TCTAAGTCCCTTCCTGC AGGTTCAA GCAGGAGGGGACTTAGA TTTATGGTAGAGGAG TERM 3519 2522708 - 2522677 - T 84 -11.6 -3.21199 | opp_overlap 2522672, overlap 2522672 TATTTAGGAATCTAA GTCCCTTCCTGC AGGTTCAA GCAGGAGGGGAC TTAGATTTATGGTAG Dhaf_2336 2523644 - 2522769 - | anaerobic dimethyl sulfoxide reductase subunit C TERM 3520 2523565 - 2523581 + g 74 -10.9 -2.78463 | TCCTTGTACAGGTAT TTCGCCA GGG TGGCGAA TATCATCAGGCCAAT Dhaf_2337 2524226 - 2523648 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2338 2526897 - 2524243 - | molybdopterin oxidoreductase TERM 3521 2526519 - 2526529 + g 93 -6.8 -5.49569 | CCTTTTTACCGCCGC CTGG TTC CCAG TTTTTTCTCTTCATA TERM 3522 2526821 - 2526847 + g 72 -10.9 -2.60486 | gap 1, opp_overlap 2526791, overlap 2526820 AGCGCCAAGCCGGCA GTTCC-GGCTGC GGTA GCGGCCAGGAAC GTTCTGCGGCTTATT TERM 3523 2527390 - 2527408 + G 82 -11.7 -3.31416 | overlap 2527384 TTGGGGCGGGCTATC GCACCCG CGGGC CGGGTGC TTGGCTATTTGTTTT TERM 3524 2527447 - 2527457 + G 73 -3.2 -4.84017 | opp_overlap 2527439 2527438, overlap 2527434 2527434 GACAAAGCGGAAGGC TCCG ACT TGGA TTTTTATGAAACCTT TERM 3525 2528256 - 2528242 - g 73 -10 -3.39521 | opp_overlap 2528239, overlap 2528237 CTTAGTAAAATTGAA GCGATC CTT GATCGC CCCTTGGATGATATG Dhaf_2339 2527114 - 2528343 + | transcriptional regulator, CdaR TERM 3526 2528623 - 2528602 - T 100 -8.7 -4.99035 | GTACCTATAGAAAAA GCCTACCAC CGGG GCGGTAAGC TTAAGAATGGGTTAT Dhaf_2340 2529343 - 2528654 - | cytoplasmic chaperone TorD family protein Dhaf_2341 2529966 - 2529391 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2342 2531397 - 2530036 - | FMN-binding domain protein Dhaf_2343 2532208 - 2531417 - | DMSO reductase anchor subunit-like protein TERM 3527 2532274 - 2532242 - R 100 -16.4 -3.64703 | TTTTGGGTAGCGAAA TCCTCTTCCCGCCC GTAAA AAGCGGGAAGAGGA AAATAAAGCGGAAGA Dhaf_2344 2533110 - 2532298 - | putative anaerobic reductase component Dhaf_2345 2533689 - 2533114 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2346 2536348 - 2533709 - | molybdopterin oxidoreductase TERM 3528 2535930 - 2535946 + g 81 -9.5 -4.03413 | opp_overlap 2535926 ATCCGAACCCATTCA TCTTTGC CGC GCAAAGA TTTATCTCCGCCGGT TERM 3529 2536236 - 2536219 - G 72 -11.3 -2.57132 | overlap 2536218 CGGCTGCGTCATAAT TCGCTCC CACC GGAGCGA GCGCAGTGCCGCAGC TERM 3530 2536781 - 2536803 + G 70 -9.8 -3.24032 | opp_overlap 2536782, overlap 2536779 2536782 2536784 CGGAAGCTTCTTAAA ACATCCGGCC AAG GGCTGGATGC TCTTACTTGCGCCAT TERM 3531 2536802 - 2536782 - g 87 -11.1 -4.09739 | opp_overlap 2536781 2536779 2536782 2536784 GGAAGCTTCTTAAAA CATCCGGCC AAG GGCTGGATG CTCTTACTTGCGCCA TERM 3532 2536782 - 2536802 + G 84 -13.3 -2.54098 | opp_overlap 2536782, overlap 2536781 2536779 2536784 GGAAGCTTCTTAAAA CATCCGGCC AAG GGCTGGATG CTCTTACTTGCGCCA TERM 3533 2536784 - 2536800 + G 71 -10.1 -2.80699 | opp_overlap 2536782, overlap 2536782 2536781 2536779 AAGCTTCTTAAAACA TCCGGCC AAG GGCTGGA TGCTCTTACTTGCGC Dhaf_2347 2536733 - 2537959 + | transcriptional regulator, CdaR TERM 3534 2539562 - 2539547 - g 76 -9 -3.88097 | opp_overlap 2539560 CTATAGAAGGAAGAA GGAGAG CTTG CTCTCC GGTTGGAACTATTGT Dhaf_2348 2537997 - 2539988 + | molybdopterin oxidoreductase Dhaf_2349 2539981 - 2540535 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 3535 2540863 - 2540884 + G 71 -10.1 -2.76696 | overlap 2540862 ATATTGCGATTGCCC CGCTTGCGC AGCA GCGGAAGCG ATTCTTGAGAAGAAG Dhaf_2350 2540558 - 2540914 + | hypothetical protein TERM 3536 2540939 - 2540963 + F 100 -15.8 -3.72231 | TTTGTCCACAGTCCG GGAGGAGGGT ACAAC ACCCTCCTCC TTATTACGTGTATAG TERM 3537 2542158 - 2542188 + F 100 -9.2 -4.70879 | gap 1, opp_overlap 2542158 GATTAAGACGTAAAA CGACCT-CTTACT CAAAAC AGTAAGGAGGTCG TTTTTAGGCTTTACC TERM 3538 2542188 - 2542158 - f 88 -9.2 -4.29325 | gap 1, opp_overlap 2542158 GATTAAGACGTAAAA CGACCT-CTTACT CAAAAC AGTAAGGAGGTCG TTTTTAGGCTTTACC TERM 3539 2542412 - 2542400 - f 100 -10.5 -4.55128 | overlap 2542402 AGGTGGAAATTAAAA GGCCG CCG CGGCC CGCAAGTGTAGCAGC TERM 3540 2542621 - 2542654 + F 87 -8.2 -4.55798 | gap 1 GACAGTATGAATTCA GGCGCATGTGTAGGG ATAAA CCCT-TGCATGCGTC TTTTAATTTCCCCTG TERM 3541 2542884 - 2542906 + G 73 -8.4 -3.95073 | gap 1, opp_overlap 2542883 2542884, overlap 2542902 CCCGCAGAGCATAAG CCCGGC-CC GGATAA GGAGCCGGG TTTATGAGTCTACGC TERM 3542 2542902 - 2542925 + G 71 -4.5 -4.56887 | opp_overlap 2542884 2542883, overlap 2542884 2542922 GGCCCGGATAAGGAG CCGGGTTTA TGAGTC TACGCCCGG TTTTCTCGGTTTTTC Dhaf_2352 2542750 - 2542971 + | hypothetical protein TERM 3543 2543047 - 2543057 + G 71 -8.2 -3.65425 | opp_overlap 2543042 2543041, overlap 2543043 2543052 AGTATGAAAGCCGGT CCGG AGT CCGG TTTAACCTGTCTGAA TERM 3544 2543190 - 2543217 + G 71 -2.6 -4.88067 | overlap 2543194 ACTGCCTCGTCCATC CGGCAGCGCAAT AAGG ATTGTGCCATCG TTTTTGTCACTGCCT Dhaf_2353 2542965 - 2543360 + | response regulator receiver protein TERM 3545 2543607 - 2543584 - T 100 -6.6 -5.67063 | opp_overlap 2543587, overlap 2543585 2543587 TTGAGGAGAAAAAAA GGACCGAGGC CGCA GCCTCGGTTT TCCTTATAGGCTATA TERM 3546 2543606 - 2543585 - T 86 -10.1 -3.99153 | opp_overlap 2543587, overlap 2543584 2543587 TGAGGAGAAAAAAAG GACCGAGGC CGCA GCCTCGGTT TTCCTTATAGGCTAT TERM 3547 2543587 - 2543604 + T 100 -12.7 -4.49389 | opp_overlap 2543587 2543585 2543584 AGGAGAAAAAAAGGA CCGAGGC CGCA GCCTCGG TTTTCCTTATAGGCT TERM 3548 2543604 - 2543587 - T 100 -12.7 -3.5694 | opp_overlap 2543587, overlap 2543585 2543584 AGGAGAAAAAAAGGA CCGAGGC CGCA GCCTCGG TTTTCCTTATAGGCT TERM 3549 2543609 - 2543625 + T 86 -5.9 -5.252 | CGCAGCCTCGGTTTT CCTTATA GGC TATAGGG TTTTTTCTCAGCCTA TERM 3550 2543693 - 2543668 - T 73 -8.4 -3.59979 | opp_overlap 2543658 TCGCCGGATCGTAAA GATCGTTGAC TGTCGT GTCAACAATC TTCACATCCTTGATC Dhaf_2354 2543884 - 2543645 - | hypothetical protein Dhaf_2355 2544162 - 2543938 - | protein of unknown function DUF1659 TERM 3551 2544830 - 2544813 - g 70 -9.9 -3.1211 | CAGGAGAGCAGGGAA CTCCAGA AAGC TCTGGAG GGTGAAAAGGAGAAA TERM 3552 2544999 - 2544971 - g 79 -9.7 -3.82202 | opp_overlap 2544995, overlap 2544995 CAGGCTCAAAGATAA GCAGCTCTTCA AAAACAA TGAAAAGCTGC GGAATCAGCTTACTG TERM 3553 2545008 - 2544995 - g 71 -3.8 -4.70739 | opp_overlap 2544995, overlap 2544971 CAAAAACAATGAAAA GCTG CGGAAT CAGC TTACTGCCGCCCAAA TERM 3554 2545080 - 2545057 - g 71 -7.4 -4.08064 | opp_overlap 2545076, overlap 2545062 AAGCCGCCTTTAAAA TGGAAGCCCT GGAA AGGGCCTTCA AAGAAGTGGTGTATG Dhaf_2356 2544195 - 2545199 + | hypothetical protein TERM 3555 2545229 - 2545274 + T 100 -15 -2.71712 | opp_overlap 2545236, overlap 2545227 2545236 AATAGCTCATTAAGA CGTGAAACGACCTCTTTACT CAAAAC AGTAAGGAGGTCGTTTTAGG CTTTACCCCAGAGGG TERM 3556 2545267 - 2545236 - T 90 -11.7 -3.67517 | opp_overlap 2545227 2545236 2545229 CATTAAGACGTGAAA CGACCTCTTTACT CAAAAC AGTAAGGAGGTCG TTTTAGGCTTTACCC TERM 3557 2545236 - 2545267 + T 100 -13.9 -4.24002 | opp_overlap 2545236, overlap 2545227 2545229 CATTAAGACGTGAAA CGACCTCTTTACT CAAAAC AGTAAGGAGGTCG TTTTAGGCTTTACCC Dhaf_2357 2545991 - 2545302 - | RelA/SpoT domain protein Dhaf_2358 2547880 - 2546021 - | ABC transporter related TERM 3558 2547802 - 2547851 + g 100 -15.7 -4.76193 | gap 1, overlap 2547803 2547806 AATCCTTGGCTTTTT CGCCGCCGCCCATGGGTGGGCC ACTTGCC GGCCCACCCATGGG-GCCGCCA TTTTGTGTTCTGGTT TERM 3559 2547803 - 2547850 + g 100 -19.2 -3.44089 | gap 1, overlap 2547802 2547806 ATCCTTGGCTTTTTC GCCGCCGCCCATGGGTGGGCC ACTTGCC GGCCCACCCATGGG-GCCGCC ATTTTGTGTTCTGGT TERM 3560 2547806 - 2547849 + g 100 -20.4 -2.65369 | gap 1, overlap 2547803 2547802 CTTGGCTTTTTCGCC GCCGCCC-ATGGGTGGGCC ACTTGCC GGCCCACCCATGGGGCCGC CATTTTGTGTTCTGG Dhaf_2359 2549637 - 2547877 - | ABC transporter related TERM 3561 2548630 - 2548652 + g 73 -2.5 -5.12068 | overlap 2548631 2548647 AAACACGACTTCACC TCGCAGGCC CGGCT GGCCCTCGG TTTTTGTTCCGTCTA TERM 3562 2549600 - 2549580 - G 74 -11.2 -2.78495 | opp_overlap 2549579, overlap 2549578 2549577 2549575 CGACGATGAAGATCA GGCTGATG CCTGC CATCAGCC ATTCCTCCGCCTTGA Dhaf_2360 2550259 - 2549777 - | transcriptional regulator, MarR family Dhaf_2361 2550959 - 2550534 - | transcriptional regulator, SARP family TERM 3563 2550872 - 2550889 + g 71 -8.5 -3.6608 | opp_overlap 2550872 CGACTCGGGCCAGAA GATATCC AGCA GGATATC TTTGGATACCGTCCT TERM 3564 2551070 - 2551108 + r 75 -5.9 -4.67038 | opp_overlap 2551070 GTAGTGGGATATAAA GTCTTCGACAAATACCG CAATC CGGCTTTCGTCGAGGGC TTTTGCTTTTCCGCC TERM 3565 2551753 - 2551793 + r 100 -18.4 -3.09749 | opp_overlap 2551753, overlap 2551755 2551791 TGCGGTTATGAAAAA GAGCCGGTCACCACAAGA TATTC TCTTAGGGTGACCGGCTC TGTGTCTTAGAGGTC TERM 3566 2551793 - 2551753 - R 100 -20.6 -4.72272 | opp_overlap 2551753 2551755 2551791 TGCGGTTATGAAAAA GAGCCGGTCACCACAAGA TATTC TCTTAGGGTGACCGGCTC TGTGTCTTAGAGGTC TERM 3567 2551755 - 2551791 + r 100 -15.2 -3.10493 | opp_overlap 2551753, overlap 2551753 CGGTTATGAAAAAGA GCCGGTCACCACAAGA TATTC TCTTAGGGTGACCGGC TCTGTGTCTTAGAGG Dhaf_2363 2552315 - 2551800 - | Prolyl aminopeptidase TERM 3568 2552555 - 2552575 + H 78 -4 -5.16038 | gap 1, opp_overlap 2552555, overlap 2552555 2552550 AAAAGGCTGTAAAAA GGG-TGAGT TGAG GCTCATCCC TTTTCTTTATTATAT Dhaf_2364 2552646 - 2552795 + | hypothetical protein TERM 3569 2554896 - 2554886 - g 71 -8.2 -3.64703 | GGGTCTGGATCGAAA GCCC CCG GGGC CGCTTTAAACAAAAA Dhaf_2365 2552842 - 2555175 + | molybdopterin oxidoreductase Dhaf_2366 2555168 - 2555521 + | putative oxidoreductase iron-sulfur subunit TERM 3570 2555569 - 2555522 - f 73 -8.4 -3.61398 | gap 1, opp_overlap 2555549 2555550 2555560, overlap 2555526 2555549 GCCCCCCGGCAATAA GCAAGCCTGGACTTTCGCCGG CATCAAT CCGGCGGGAGTC-AGGCTCCC GATGGGTTCTTGATG TERM 3571 2555565 - 2555526 - f 78 -10 -3.53444 | gap 1, opp_overlap 2555549 2555550 2555560, overlap 2555522 2555549 CCCGGCAATAAGCAA GCCTGGACTTTCGCCGG CATCAAT CCGGCGGGAGTC-AGGC TCCCGATGGGTTCTT TERM 3572 2555549 - 2555575 + F 75 -8.6 -3.75105 | opp_overlap 2555526 2555522 2555549, overlap 2555550 2555560 TTTCGCCGGCATCAA TCCGGCGGGAGT CAG GCTCCCGATGGG TTCTTGATGAGTTCC TERM 3573 2555550 - 2555574 + F 72 -9.9 -2.84581 | opp_overlap 2555526 2555522 2555549, overlap 2555549 2555560 TTCGCCGGCATCAAT CCGGCGGGAGT CAG GCTCCCGATGG GTTCTTGATGAGTTC TERM 3574 2555610 - 2555624 + F 72 -9.2 -3.07233 | overlap 2555618 AGGGCTTTACCGTGT TGCCGG TGC CCGGCG TGTTCCGGGTTATAG Dhaf_2367 2555693 - 2556508 + | dihydropteroate synthase DHPS Dhaf_2368 2556541 - 2557182 + | cobalamin B12-binding domain protein Dhaf_2369 2557203 - 2558369 + | hypothetical protein Dhaf_2370 2558396 - 2558506 + | hypothetical protein TERM 3575 2558778 - 2558792 + G 76 -11.4 -2.78776 | overlap 2558777 2558780 TACAGGCTTTGACCT CACCGG CTG CCGGTG CTATTTTGAAGCATT TERM 3576 2559267 - 2559248 - g 74 -9.2 -3.65902 | opp_overlap 2559257, overlap 2559249 TTGATTTTATGGAAA TGCCCGGA CCCC TCCGGGCT GGAGGAATTTAACCC TERM 3577 2559266 - 2559249 - g 81 -12.7 -2.79327 | opp_overlap 2559257, overlap 2559248 TGATTTTATGGAAAT GCCCGGA CCCC TCCGGGC TGGAGGAATTTAACC Dhaf_2371 2558678 - 2559955 + | major facilitator superfamily MFS_1 Dhaf_2372 2560070 - 2561443 + | sugar (Glycoside-Pentoside-Hexuronide) transporter TERM 3578 2561486 - 2561506 + F 77 -4.7 -4.98255 | opp_overlap 2561486, overlap 2561491 ATGGAAAAGATTAAA GAGGGCA GAAATAG TGTCCTC TTTTTGTAATTGCAG TERM 3579 2562047 - 2562035 - g 70 -7.7 -3.90112 | TTGTGTTTAATGAAA GTACC ACA GGTAC CACCGCTCATGGTTT Dhaf_2373 2561644 - 2563686 + | PAS modulated sigma54 specific transcriptional regulator, Fis family Dhaf_2374 2564137 - 2563802 - | putative oxidoreductase iron-sulfur subunit Dhaf_2375 2566421 - 2564178 - | molybdopterin oxidoreductase TERM 3580 2564321 - 2564295 - G 88 -12.4 -3.66378 | opp_overlap 2564293 GATATTGGATTTAAA GGTACCGAAC AGGTTGG GTTCGGTACC GGCTTGTTCCGGGTA Dhaf_2376 2566613 - 2566446 - | zinc finger CDGSH-type domain protein TERM 3581 2566533 - 2566553 + g 88 -2.5 -5.75342 | opp_overlap 2566537, overlap 2566507 2566534 2566537 GCATTTTGCAGCCAT ATGACCTTG TTG CAGGGTTAA TTTTTTTTGGCAGCC TERM 3582 2567107 - 2567076 - H 95 -9.4 -4.53034 | CGGATACAAGGAAAA CGCATCAGCCGGAA GGTG CTAAGGCTGATGCG GAACAAGAAAGGAGA TERM 3583 2567618 - 2567654 + G 74 -10 -3.61517 | gap 1, overlap 2567620 2567621 GCTATGCCTGTTACA CTCCCCGTG-CCGCCGC CACG GCGGCGATCACGGGCTG TTATTACCCGGAGAT TERM 3584 2567620 - 2567652 + G 78 -11.2 -3.38812 | gap 1, overlap 2567618 2567621 TATGCCTGTTACACT CCCCGTG-CCGCCGC CACG GCGGCGATCACGGGC TGTTATTACCCGGAG TERM 3585 2567621 - 2567651 + G 90 -14.7 -2.63073 | gap 1, overlap 2567620 2567618 ATGCCTGTTACACTC CCCGTG-CCGCCGC CACG GCGGCGATCACGGG CTGTTATTACCCGGA TERM 3586 2567749 - 2567778 + G 71 -9.3 -3.53761 | gap 1, opp_overlap 2567751, overlap 2567752 2567767 GTGCTTTGGGGGAAG GAG-CCGTTGCCTT CCA ACGGCGACGGTCTC TTTGGCCACGCCTTG TERM 3587 2567752 - 2567774 + G 70 -9.8 -3.24232 | opp_overlap 2567751, overlap 2567749 2567767 CTTTGGGGGAAGGAG CCGTTGCCTT CCA ACGGCGACGG TCTCTTTGGCCACGC TERM 3588 2568244 - 2568232 - g 82 -10.5 -3.80625 | overlap 2568226 GTGGGAGAAGCCAAA CCGGC AGT GCCGG AAGCCGAGGATGGTA Dhaf_2377 2567128 - 2569503 + | Formate dehydrogenase TERM 3589 2569715 - 2569769 + G 78 -12.1 -2.67708 | opp_overlap 2569724 ATTTATGCGACGGAT GCCAGGACAG-GGTGGCCGCAGGCCGG AAG CCCACCTGTGTGCACCACTG-CCTGGC TGATGTGATGCGTTT Dhaf_2378 2569504 - 2569854 + | putative oxidoreductase iron-sulfur subunit TERM 3590 2569913 - 2569880 - f 100 -12.3 -3.48292 | opp_overlap 2569884, overlap 2569878 AGGCATTAGGAAAGA CGGAGCTGCGGGGGC GGGC GCCTGCGCAGCTCTG ATGCGGAGGTCATGA TERM 3591 2569884 - 2569909 + F 89 -12.5 -2.78596 | opp_overlap 2569880 2569878 ATTAGGAAAGACGGA GCTGCGGGGGC GGGC GCCTGCGCAGC TCTGATGCGGAGGTC Dhaf_2379 2569928 - 2570119 + | hypothetical protein TERM 3592 2570155 - 2570210 + T 89 -10.5 -3.96893 | gap 1, opp_overlap 2570157 2570160, overlap 2570156 AAAAATAATAGTAAT AAGTAGGAGCCTCCCGGCACAAGAAA AGAAA TATCTTGTACCGGGAGGCT-CTGCGG TTTATAGCGTTTATT TERM 3593 2570156 - 2570209 + T 100 -14 -2.97051 | gap 1, opp_overlap 2570157 2570160, overlap 2570155 AAAATAATAGTAATA AGTAGGAGCCTCCCGGCACAAGAAA AGAAA TATCTTGTACCGGGAGGCT-CTGCG GTTTATAGCGTTTAT TERM 3594 2570208 - 2570157 - T 100 -17.5 -3.86781 | gap 1, opp_overlap 2570156 2570155, overlap 2570160 AAATAATAGTAATAA GTAGGAGCCTCCCGGCACAAGAAA AGAAA TATCTTGTACCGGGAGGCTC-TGC GGTTTATAGCGTTTA TERM 3595 2570206 - 2570160 - T 100 -20.3 -2.98778 | opp_overlap 2570156 2570155, overlap 2570157 TAATAGTAATAAGTA GGAGCCTCCCGGCACAAGAAA AGAAA TATCTTGTACCGGGAGGCTCT GCGGTTTATAGCGTT Dhaf_2380 2572940 - 2570292 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 3596 2572671 - 2572661 - G 83 -8.2 -4.59853 | overlap 2572662 TGAATTCCTGAAAAA CGCC AAT GGCG GCGTTGAGGACCACC Dhaf_2381 2574152 - 2572986 - | cation diffusion facilitator family transporter TERM 3597 2574425 - 2574407 - g 85 -10.2 -4.11773 | opp_overlap 2574406 2574404 2574407 AAAGAGTGGGTAAAA CCGCTGCT GGA AGCTGCGG ATCTTGGTGGTTGTC Dhaf_2382 2574359 - 2575258 + | hypothetical protein TERM 3598 2575624 - 2575644 + G 72 -6.1 -4.36914 | TGTGTCCTGGTACCT GCTGAAGAG AAG CTGTTCGGC TTTTATGAGAGGCAA TERM 3599 2575859 - 2575849 - g 73 -4.6 -4.72272 | opp_overlap 2575851 GTTGCCTATCAAAAA CAGG TTT CCCG GCTTTCCGGGGCAGA Dhaf_2383 2575276 - 2576184 + | GCN5-related N-acetyltransferase TERM 3600 2576190 - 2576208 + T 79 -8.1 -4.38141 | opp_overlap 2576189, overlap 2576187 TTTCGACTGAATCAG CCCTGCT TTAGC AGCGGGG TTCTTTTCTGTAAAC TERM 3601 2576262 - 2576230 - T 91 -5 -5.63517 | gap 1, opp_overlap 2576230 2576238 TCTGTAAACAAAAAA GAACAG-GATTGTGA TTAA CCACAATTTCTGTTC TTTTGGCTTTTAAGG TERM 3602 2576230 - 2576262 + T 74 -6.5 -4.4267 | gap 1, opp_overlap 2576230, overlap 2576238 TCTGTAAACAAAAAA GAACAG-GATTGTG ATTAAC CACAATTTCTGTTC TTTTGGCTTTTAAGG Dhaf_2384 2577283 - 2576306 - | hypothetical protein TERM 3603 2577106 - 2577118 + g 71 -6.3 -4.21438 | CCAGGATGGATTTCT TATCC TCT GGATA TTCTTTGTTCAACTC TERM 3604 2577472 - 2577508 + H 100 -12.4 -4.88288 | opp_overlap 2577477, overlap 2577473 TATACTCCCAGATAG TGAAATTAAGCCCGCT TTAGC AGCGGGCTTAATTCCC TTTTATCTTCTTTTA TERM 3605 2577473 - 2577507 + H 100 -15.9 -3.50533 | opp_overlap 2577477, overlap 2577472 ATACTCCCAGATAGT GAAATTAAGCCCGCT TTAGC AGCGGGCTTAATTCC CTTTTATCTTCTTTT TERM 3606 2577503 - 2577477 - H 100 -15.3 -3.74077 | opp_overlap 2577473 2577472 TCCCAGATAGTGAAA TTAAGCCCGCT TTAGC AGCGGGCTTAA TTCCCTTTTATCTTC Dhaf_2385 2577565 - 2578422 + | degV family protein Dhaf_2386 2579303 - 2578398 - | Methyltransferase type 11 TERM 3607 2578682 - 2578698 + g 74 -2.9 -5.04601 | GGTTGCTGTTGGTGT TCTGCAG GGC CTGGGGA TTTTTGATTTCTACG TERM 3608 2579018 - 2579036 + g 100 -9.5 -4.72386 | GAGCTACTCCTTCAT GCTCGGC TCTCT GCCGGGC TTTTTCGATCATTTG TERM 3609 2579797 - 2579810 + G 73 -4.5 -4.74598 | TGGCTTCGGCTGCGG CAGGG GTGT TCCTG TTTGTTTTAGCTTTG Dhaf_2387 2579424 - 2580005 + | protein of unknown function DUF205 TERM 3610 2580440 - 2580450 + G 74 -6.8 -4.33675 | TTATATAATCACCTG GGCT TTA AGCC TTTTGGTCCTCTGGT Dhaf_2388 2580005 - 2581630 + | aminotransferase class V TERM 3611 2582017 - 2582006 - g 72 -5.8 -4.34402 | opp_overlap 2582000 GGTGGCAGAGGAAAA GGCT ACCA AGCC CTGTCCTTATTGCTA Dhaf_2389 2581644 - 2582096 + | large conductance mechanosensitive channel protein TERM 3612 2582184 - 2582168 - T 72 -9.3 -3.12338 | overlap 2582160 2582167 AACTAACGCGAAAAG CCCGCCG CTC CGTCGGG TGCCCGGCCAAATCG Dhaf_2390 2583466 - 2582558 - | pseudouridine synthase, RluA family TERM 3613 2584476 - 2584504 + G 73 -7.5 -4.18018 | overlap 2584478 2584479 2584481 TATTGGGGTTAACCC GTATATCCTTCAT CCC ATGAAGGATACTC TTTTCGATGAGAAAA TERM 3614 2584478 - 2584502 + G 71 -8.7 -3.69216 | overlap 2584476 2584479 2584481 TTGGGGTTAACCCGT ATATCCTTCAT CCC ATGAAGGATAC TCTTTTCGATGAGAA TERM 3615 2584479 - 2584501 + G 80 -12.2 -2.81208 | overlap 2584478 2584476 2584481 TGGGGTTAACCCGTA TATCCTTCAT CCC ATGAAGGATA CTCTTTTCGATGAGA TERM 3616 2584481 - 2584499 + G 72 -10.4 -2.95081 | overlap 2584479 2584478 2584476 GGGTTAACCCGTATA TCCTTCAT CCC ATGAAGGA TACTCTTTTCGATGA Dhaf_2391 2583613 - 2584725 + | putative aminopeptidase Dhaf_2392 2584757 - 2585638 + | diacylglycerol kinase catalytic region TERM 3617 2585639 - 2585656 + F 100 -12.7 -3.63627 | ACTGTGCTTTGTTAA GGGACCC GCCG GGGTCCC TTTGCACTATCAGAA TERM 3618 2585789 - 2585814 + G 75 -11.9 -2.72144 | opp_overlap 2585792, overlap 2585788 CAACCGCCCCGGCAA GGATGTGGATG GAAT CATCCCCATCC CTTTGGAGGAGCTGG TERM 3619 2586677 - 2586688 + G 75 -5.8 -4.64676 | opp_overlap 2586685 CGAATGGGTCCGGGA TGGC AAAC GCCA TTTTCTTGGCCATGA Dhaf_2393 2585685 - 2587274 + | Polynucleotide adenylyltransferase region TERM 3620 2587885 - 2587869 - g 74 -6.5 -4.3208 | overlap 2587870 TGGGAGAAGTCAAAA GTGCCGA AGT TCGGCAA AAGGCTGAACCAATG TERM 3621 2587884 - 2587870 - g 70 -10 -3.18766 | overlap 2587869 GGGAGAAGTCAAAAG TGCCGA AGT TCGGCA AAAGGCTGAACCAAT Dhaf_2394 2587280 - 2587930 + | flavin reductase domain protein FMN-binding Dhaf_2395 2587959 - 2588318 + | hypothetical protein TERM 3622 2588407 - 2588434 + F 100 -9.3 -4.68209 | opp_overlap 2588407 AAAAGAGAGAAGTGA GGACTTTGAAT AGCTGG ATTCAGAGTCC TTTGTTTATTAGCGT TERM 3623 2588940 - 2588930 - g 73 -5.4 -4.56597 | opp_overlap 2588930 CTGGCTGGGGAAAAA TCAG CAG CTGA TTATTCCCGGGAAGG Dhaf_2396 2588472 - 2589566 + | domain of unknown function DUF1730 TERM 3624 2589736 - 2589689 - f 100 -7.9 -5.65177 | gap 2, opp_overlap 2589697, overlap 2589692 2589697 ACAGTCAGAAAAAAA TA-AG-AAAAGAGGGCGACTGGC AGAT GCCAGAAGCCCTCTTTTGCCGTA AAATATAAGTTGATG TERM 3625 2589731 - 2589692 - f 100 -13.6 -4.89054 | opp_overlap 2589697, overlap 2589689 2589697 GTCAGAAAAAAATAA GAAAAGAGGGCGACTGGC AGAT GCCAGAAGCCCTCTTTTG CCGTAAAATATAAGT TERM 3626 2589726 - 2589697 - f 100 -13.5 -5.25154 | opp_overlap 2589697, overlap 2589692 2589689 AAAAAAATAAGAAAA GAGGGCGACTGGC AGAT GCCAGAAGCCCTC TTTTGCCGTAAAATA TERM 3627 2589697 - 2589726 + F 100 -13.5 -4.14243 | opp_overlap 2589692 2589689 2589697 AAAAAAATAAGAAAA GAGGGCGACTGGC AGAT GCCAGAAGCCCTC TTTTGCCGTAAAATA Dhaf_2397 2589749 - 2591353 + | transposase ISNCY family protein TERM 3628 2591463 - 2591516 + F 84 -5.2 -5.31275 | opp_overlap 2591467, overlap 2591467 GCCTTTTCCTCAAGA AAAAGAGGGGGCCGCATTACGTTT TCTCAC AAACGTTTTGCGACACCCTCTTCC TTTTTTATGGTAAAA TERM 3629 2591467 - 2591512 + F 89 -10.4 -4.0014 | opp_overlap 2591467, overlap 2591463 TTTCCTCAAGAAAAA GAGGGGGCCGCATTACGTTT TCTCAC AAACGTTTTGCGACACCCTC TTCCTTTTTTATGGT TERM 3630 2591512 - 2591467 - f 100 -12.6 -5.06414 | opp_overlap 2591463 2591467 TTTCCTCAAGAAAAA GAGGGGGCCGCATTACGTTT TCTCAC AAACGTTTTGCGACACCCTC TTCCTTTTTTATGGT TERM 3631 2591756 - 2591769 + G 71 -6.7 -4.26076 | ATCGCGGAAGAACTC TCAGC CATT GCTGA TTTTAATCACGATGG TERM 3632 2591899 - 2591912 + G 78 -5.2 -4.9725 | overlap 2591891 TGCTACGGCTCATAT GGGC TGGCTT GCCC TTTTTCTATGCCAAT Dhaf_2398 2591612 - 2592313 + | hypothetical protein TERM 3633 2592378 - 2592396 + F 80 -4.5 -5.09521 | AAGATAGGGGGGAAA GCTTGGC TATAT GCTGAGC TTTTTGATTTGTTGA TERM 3634 2592550 - 2592568 + G 71 -3.1 -4.85782 | opp_overlap 2592552, overlap 2592552 2592556 CTGCGGGCCAACAAC GATGATG AATGC CATCAGC TTTCTTTTTGAACGG Dhaf_2399 2592497 - 2593123 + | hypothetical protein TERM 3635 2593147 - 2593173 + F 100 -10.3 -4.93877 | CTGTGCCTTTTGGCA GGACTTGAATC ACTGC GATTTAAGTCC TTTTGTTTAGTCAGC TERM 3636 2593401 - 2593423 + F 86 -7.7 -4.6645 | opp_overlap 2593404, overlap 2593404 CACCATATGAAACAC AAACCCGAG TTAAT CTCGGGTTC TTTTATCTATATGTA TERM 3637 2593404 - 2593420 + F 95 -9.4 -4.42325 | opp_overlap 2593404, overlap 2593401 CATATGAAACACAAA CCCGAG TTAAT CTCGGG TTCTTTTATCTATAT TERM 3638 2593420 - 2593404 - f 88 -9.4 -4.3851 | opp_overlap 2593401 2593404 CATATGAAACACAAA CCCGAG TTAAT CTCGGG TTCTTTTATCTATAT Dhaf_2401 2593714 - 2594223 + | hypothetical protein Dhaf_2402 2594257 - 2594739 + | hypothetical protein TERM 3639 2594828 - 2594777 - T 100 -19.1 -4.63486 | gap 1, opp_overlap 2594777 AGCTCCTCAATAAAA CTACGCTGGAATGTA-CCAAGAAC GCGAT GTTCCTGGGTATATTCCAGCGTAG TTTGCTTTATACAGT TERM 3640 2594777 - 2594828 + T 100 -19.8 -4.14397 | gap 1, opp_overlap 2594777 AGCTCCTCAATAAAA CTACGCTGGAATGTAC-CAAGAACG CGA TGTTCCTGGGTATATTCCAGCGTAG TTTGCTTTATACAGT Dhaf_2403 2596022 - 2594859 - | aminotransferase class I and II TERM 3641 2594974 - 2594993 + g 77 -4.2 -5.1356 | gap 1, overlap 2594976 GAGGGGCCGAAAGCT GT-GCCGGG AAC CACGGCTAC TTTTTCTTCCTGGAG Dhaf_2404 2596516 - 2596019 - | transcriptional regulator, AsnC family TERM 3642 2596123 - 2596141 + g 83 -8.8 -4.56597 | overlap 2596125 TGGTTGTGTCGGTGA CATGCTCC AGG GGAGCAAG TTTTTCGGCCACAAA Dhaf_2405 2596789 - 2597256 + | tRNA/rRNA methyltransferase (SpoU) TERM 3643 2597886 - 2597909 + G 83 -3.8 -5.39905 | gap 1 GCCCATCTGACCTTG GCTTTAG-CCG GTG CGGCCTTAGGC TTTTTATTCTTTAAT TERM 3644 2597928 - 2597942 + G 70 -7.8 -3.87869 | TTATTCTTTAATTTT CATCCG GCC CGGGTG TTTATGGGGGATTCC TERM 3645 2598259 - 2598270 + G 71 -7.2 -4.08064 | overlap 2598262 TGGGCTCCTGGGTTT GGGC GGCC GCCC TTTTGAGCGCCGATT Dhaf_2406 2597313 - 2598359 + | glycosyl transferase family 4 Dhaf_2407 2598402 - 2599103 + | beta-lactamase domain protein TERM 3646 2599145 - 2599165 + F 84 -5.4 -5.30686 | GAGTTATTGTTTTAA TACCTGCC GTTTA GGTGGGTA TTTTTTATGGGTGTT Dhaf_2408 2599442 - 2599648 + | hypothetical protein Dhaf_2409 2599785 - 2601098 + | putative signal transduction protein with CBS and DRTGG domains TERM 3647 2601126 - 2601145 + F 74 -6.4 -4.51743 | TTAAATAGGGGAAAA GGCCTTGA GTTA TCAGGGTC TTTCTTTCATAATGG TERM 3648 2603616 - 2603628 + G 71 -4.1 -4.70583 | CGTGATGAGCTCGGC GGATA AGG TGTCC TTTTATATTCATGAA Dhaf_2410 2601250 - 2604822 + | DNA polymerase III, alpha subunit Dhaf_2411 2604849 - 2605340 + | pantetheine-phosphate adenylyltransferase Dhaf_2412 2605480 - 2605680 + | hypothetical protein Dhaf_2413 2605683 - 2606597 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 3649 2607323 - 2607333 + G 71 -8.2 -3.66178 | opp_overlap 2607319 2607323, overlap 2607318 GGCAAAGCGAAGGAA GCGG CTT CCGC TTTAAAATTCACCGC Dhaf_2414 2606597 - 2607556 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 3650 2607725 - 2607745 + T 100 -11.9 -5.80003 | opp_overlap 2607720 2607725 CAATCGAAAAGCCAA TCCCTGCAG ACA TTGCAGGGA TTTTTTATTTCTTCG TERM 3651 2607745 - 2607725 - T 81 -11.2 -3.39352 | opp_overlap 2607725, overlap 2607720 CAATCGAAAAGCCAA TCCCTGCA GACAT TGCAGGGA TTTTTTATTTCTTCG TERM 3652 2607818 - 2607839 + T 100 -10.1 -5.41359 | opp_overlap 2607813, overlap 2607812 TTTGATTTAAGCTGA GGTCAGCCC TTTG GGGTTGGCC TTTTTTAGTTTACTT TERM 3653 2607975 - 2607997 + T 86 -7.7 -4.6856 | opp_overlap 2607975 CTCTTACAAAGCAAA TGCCAGTTC TTTAT GATCTGGCA TTTTTACCGTCTTTG TERM 3654 2607997 - 2607975 - T 76 -7.7 -4.13995 | opp_overlap 2607975 CTCTTACAAAGCAAA TGCCAGTTC TTTAT GATCTGGCA TTTTTACCGTCTTTG Dhaf_2415 2608440 - 2608024 - | hypothetical protein Dhaf_2416 2608594 - 2608794 + | hypothetical protein TERM 3655 2608795 - 2608824 + F 78 -5.6 -4.89339 | opp_overlap 2608797 2608798, overlap 2608797 2608798 2608819 CTTTATAGGATGTGA AACCCCCGGGGA CAATAA TTCCCGGGGCTG TTTTTATCGGTCCTT TERM 3656 2608797 - 2608822 + F 77 -8.2 -4.06182 | opp_overlap 2608797 2608798, overlap 2608795 2608798 2608819 TTATAGGATGTGAAA CCCCCGGGGA CAATAA TTCCCGGGGC TGTTTTTATCGGTCC TERM 3657 2608798 - 2608821 + F 83 -11.7 -3.02986 | opp_overlap 2608798 2608797, overlap 2608797 2608795 2608819 TATAGGATGTGAAAC CCCCGGGGA CAATAA TTCCCGGGG CTGTTTTTATCGGTC TERM 3658 2608821 - 2608798 - f 75 -10.2 -2.7752 | opp_overlap 2608797 2608795 2608798 2608819, overlap 2608797 TATAGGATGTGAAAC CCCCGGGGAC AATA ATTCCCGGGG CTGTTTTTATCGGTC TERM 3659 2608918 - 2608890 - f 80 -6.2 -4.80455 | gap 1, opp_overlap 2608890 TATTTAAATATAAAA GGAATT-TCTTCT GGCA AGAAGATAATCCC TGCTTTTCGACAAAT TERM 3660 2609215 - 2609188 - f 74 -10 -3.13081 | opp_overlap 2609186, overlap 2609187 AGACAAGGCGAAAAT GATTTATTGGCT GTAA AGCCAGTAAATC CGTGCCTTTCGAGGG TERM 3661 2609228 - 2609255 + F 100 -15.7 -4.69027 | ATCCGTGCCTTTCGA GGGCTTCCACT ATAAAA AGTGGAAGCCC TTTTTCCGTAGATTT TERM 3662 2609374 - 2609364 - f 74 -4.6 -4.78848 | CTGTCAAAGATAAAA GGGC GCT ACCC AAAACCCGCACAACC TERM 3663 2609411 - 2609458 + F 100 -13.5 -4.81249 | opp_overlap 2609411 ACCGAAACTGCAAAA GGGCGCTGATTTTAACGGCTT GATTAA GAGCCAATGAAGTCAGCGCCC TTTTTGCATTTCAAC TERM 3664 2609458 - 2609411 - f 100 -10.6 -4.24404 | opp_overlap 2609411 ACCGAAACTGCAAAA GGGCGCTGATTTTAACGGCT TGATTAAG AGCCAATGAAGTCAGCGCCC TTTTTGCATTTCAAC TERM 3665 2610046 - 2610014 - g 72 -10.5 -2.93901 | opp_overlap 2610001 2610045, overlap 2610009 AGGGCATCAACGATA CCTTCGATGCCGGGT ACG ACCTGACACCGACGG ATCAGAAGAACCTGA Dhaf_2417 2609497 - 2610165 + | hypothetical protein TERM 3666 2610215 - 2610258 + F 100 -16 -4.87318 | opp_overlap 2610215 2610208 AAAAACTACACTCAA GGGCCGGAGAACCGGGGCGT AAAA ACGTCTCCATTCTCCGGCTC TTTTTGCGTTTTGGA TERM 3667 2610258 - 2610215 - f 84 -11.6 -3.19398 | opp_overlap 2610215, overlap 2610208 AAAAACTACACTCAA GGGCCGGAGAACCGGGGCGT AAAA ACGTCTCCATTCTCCGGCTC TTTTTGCGTTTTGGA TERM 3668 2611173 - 2611141 - g 86 -12.2 -3.46687 | AACGCCAAACACGAA TATCTCTATTTCCC CTGCT GGGAGATAGAGATA GAGAAAGCAGTAAAT Dhaf_2418 2610508 - 2611692 + | hypothetical protein Dhaf_2419 2611689 - 2612291 + | hypothetical protein TERM 3669 2612381 - 2612371 - g 73 -5.4 -4.65666 | overlap 2612372 ACACTGAAAAAAGAA CCAT CCG ATGG GCGGACGAGGTCTGG Dhaf_2420 2612295 - 2612906 + | hypothetical protein TERM 3670 2613242 - 2613256 + G 73 -5.6 -4.57341 | GAATTTATCGACCGC TGCCCG GAC CAGGCA TTTTTACAGCAGCTT Dhaf_2421 2613026 - 2613397 + | hypothetical protein TERM 3671 2613774 - 2613800 + G 93 -7.9 -5.26316 | overlap 2613775 GCAAATATGCTCCAC GCCCCGCCTCT CCCGA AGAAGCGGGGA TTTTTTATGCCCTGA TERM 3672 2613775 - 2613799 + G 85 -11.4 -3.75067 | overlap 2613774 CAAATATGCTCCACG CCCCGCCTCT CCCGA AGAAGCGGGG ATTTTTTATGCCCTG Dhaf_2422 2613428 - 2614231 + | hypothetical protein TERM 3673 2615149 - 2615132 - g 73 -9.9 -3.44146 | TCTCCGGATAACCAA GGGTCAT TTCA ATGACCC TGAATACGATAATGA TERM 3674 2615468 - 2615419 - g 100 -15.8 -3.58305 | overlap 2615410 2615456 AAGCAATGCTGGAAA CCGCCCCGCAAGACCTCTCACT GGAGGA AGCGATAGACCTTGCGGAGCAG GTTCCCAATTTTCGG Dhaf_2423 2614224 - 2615708 + | hypothetical protein TERM 3675 2615754 - 2615739 - T 93 -11.8 -3.58536 | AAAGCTATGGGCAAA CCCGGC TAAA GCCGGG GACGCAAAGCCGAGG TERM 3676 2615856 - 2615818 - T 74 -9.8 -3.12351 | gap 1, opp_overlap 2615814 2615823, overlap 2615823 GCTGCTGACAGTTAA GCAAA-GTCTGCCCT TTATACTCGG AGGGCAGACTTTTGC GCAATTTTACAACTA TERM 3677 2615850 - 2615823 - T 77 -8.5 -3.94746 | opp_overlap 2615823 2615814, overlap 2615818 TGACAGTTAAGCAAA GTCTGCCCT TTATACTCGG AGGGCAGAC TTTTGCGCAATTTTA TERM 3678 2615823 - 2615850 + T 88 -9.9 -4.14013 | opp_overlap 2615818 2615823, overlap 2615814 TGACAGTTAAGCAAA GTCTGCCCTTT ATACTC GGAGGGCAGAC TTTTGCGCAATTTTA TERM 3679 2615930 - 2615920 - T 78 -5.4 -5.04385 | GAGATGGCGAAAAAA CTCA ATG TGAG GATTTGATAGATAAT Dhaf_2424 2617220 - 2615949 - | signal transduction histidine kinase regulating citrate/malate metabolism TERM 3680 2616751 - 2616740 - G 91 -7.2 -5.25893 | ACAGATAGTAAAAAA GCGG GACT CCGC CTAAAAACAAGCAGG TERM 3681 2617101 - 2617119 + g 83 -4.4 -5.38054 | opp_overlap 2617100 2617103 AAAAATGACACAGAG CAGGCCGG TGA CAAGCCTG TTTTTCTTTGTGGGC Dhaf_2425 2617950 - 2617222 - | two component transcriptional regulator, LytTR family Dhaf_2426 2618261 - 2617971 - | putative transcriptional regulator, XRE family Dhaf_2427 2618559 - 2620406 + | hypothetical protein Dhaf_2428 2620411 - 2622099 + | SH3 type 3 domain protein Dhaf_2429 2622259 - 2622681 + | hypothetical protein TERM 3682 2622775 - 2622718 - f 100 -10.7 -5.65678 | gap 1, opp_overlap 2622734, overlap 2622721 2622722 ATAAAACATAAAAAA TAATC-TCATGGCAAAAGCGGATGCGGA ACA CCCGCATCCGCTTTTGCAAAAAGGAGGA AATGACTATGCTGCC TERM 3683 2622771 - 2622721 - f 100 -18.4 -4.8277 | opp_overlap 2622734, overlap 2622718 2622722 AAACATAAAAAATAA TCTCATGGCAAAAGCGGATGCGGA ACA CCCGCATCCGCTTTTGCAAAAAGG AGGAAATGACTATGC TERM 3684 2622770 - 2622722 - f 100 -21.9 -3.46002 | opp_overlap 2622734, overlap 2622721 2622718 AACATAAAAAATAAT CTCATGGCAAAAGCGGATGCGGA ACA CCCGCATCCGCTTTTGCAAAAAG GAGGAAATGACTATG TERM 3685 2622734 - 2622758 + F 100 -17.2 -4.07568 | opp_overlap 2622722 2622721 2622718 AATCTCATGGCAAAA GCGGATGCGG AACAC CCGCATCCGC TTTTGCAAAAAGGAG Dhaf_2430 2622783 - 2623337 + | LemA family protein TERM 3686 2624067 - 2624052 - g 100 -9 -4.78981 | AGGAAGTAAAAGAAA CTGCCT TTTC AGGCAG CGATTACGATGATAC Dhaf_2431 2623346 - 2625031 + | ribosomal protein S14 Dhaf_2432 2625056 - 2625964 + | hypothetical protein TERM 3687 2625986 - 2625975 - f 70 -7.2 -3.82261 | TTTGAAGAAAATCAA CCGC CTAT GCGG AAGGGGGCATGACAT Dhaf_2433 2626000 - 2626179 + | hypothetical protein TERM 3688 2626503 - 2626483 - g 75 -6.1 -4.53439 | opp_overlap 2626495 CTAAATGGAAAGAAA CCACCGG GGATATT CCAGTGG AATGGAATTCGTCTG TERM 3689 2628988 - 2628955 - g 93 -14 -3.29471 | gap 2, overlap 2628958 2628960 GCTCCAGCAGAGCAA TGACATCGCCGCCGAC GCTG GTCGGCGGCG-TG-CA GGACGGGGCAAGCAC TERM 3690 2628986 - 2628958 - g 100 -16.8 -2.82519 | gap 1, overlap 2628955 2628960 CCAGCAGAGCAATGA CATCGCCGCCGAC GCTG GTCGGCGGCG-TG CAGGACGGGGCAAGC TERM 3691 2628985 - 2628960 - g 100 -16.1 -2.95789 | overlap 2628958 2628955 AGCAGAGCAATGACA TCGCCGCCGAC GCTG GTCGGCGGCGT GCAGGACGGGGCAAG TERM 3692 2631556 - 2631529 - g 74 -4.2 -4.88918 | gap 1, overlap 2631531 TCATTGCAAAGAAAA TCGTC-AACACCA TTG TGGTGGTAGACAA CCCCGACATCAGAGT Dhaf_2434 2626176 - 2632799 + | cell wall/surface repeat protein TERM 3693 2632946 - 2632908 - f 74 -9.8 -3.12351 | gap 1, opp_overlap 2632913, overlap 2632913 GCTGCTGACAGTTAA GCAAA-GTCTGCCCT TTATACTCGG AGGGCAGACTTTTGC GGCTTTTAACGGATG TERM 3694 2632913 - 2632940 + F 88 -9.9 -4.19276 | opp_overlap 2632908 2632913 TGACAGTTAAGCAAA GTCTGCCCTTT ATACTC GGAGGGCAGAC TTTTGCGGCTTTTAA TERM 3695 2632940 - 2632913 - f 77 -8.5 -3.94746 | opp_overlap 2632913, overlap 2632908 TGACAGTTAAGCAAA GTCTGCCCT TTATACTCGG AGGGCAGAC TTTTGCGGCTTTTAA TERM 3696 2633151 - 2633121 - f 100 -14 -5.09426 | opp_overlap 2633121 TGCAAGGTTAAAAAA GTCAGCACTTTGCC GTG GGCATCGTGCTGAC TTTTTTCTTTCGACA TERM 3697 2633121 - 2633151 + F 100 -14 -5.63517 | opp_overlap 2633121 TGCAAGGTTAAAAAA GTCAGCACTTTGCC GTG GGCATCGTGCTGAC TTTTTTCTTTCGACA TERM 3698 2633179 - 2633218 + F 75 -2.3 -5.36441 | gap 1, opp_overlap 2633175 2633190, overlap 2633181 ACAAGAAAATCTATA TAGCGACTAAATATTCCA AATAA TGGGATGTTTT-TCGCTG TTTTTTATATAGGAG Dhaf_2435 2633316 - 2633735 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 3699 2633752 - 2633784 + F 87 -6.3 -5.1523 | overlap 2633773 AATAATTCCGCTCAA CCCCCTCACGA AATCGGCTTAG TAGTGAGGGGG TTTTTCTATTCTCCC TERM 3700 2634012 - 2634028 + F 93 -12.3 -3.07043 | opp_overlap 2634012, overlap 2634014 CATCCGACCGGAAAA CAGGCTG TGG CAGCCTG TCTTGCAATGATCCC TERM 3701 2634028 - 2634012 - f 100 -12.3 -4.14243 | opp_overlap 2634012 2634014 CATCCGACCGGAAAA CAGGCTG TGG CAGCCTG TCTTGCAATGATCCC TERM 3702 2634277 - 2634317 + F 100 -11.9 -4.1347 | opp_overlap 2634275 2634279, overlap 2634279 2634281 CTTAATGTCAGAAGC GATGGGGATCGCTCTGC CTTCACA GCGGAGCGGTCCCTATA TTTGTATCATTAAGA TERM 3703 2634279 - 2634315 + F 100 -14.5 -3.66117 | opp_overlap 2634275 2634279, overlap 2634277 2634281 TAATGTCAGAAGCGA TGGGGATCGCTCTGC CTTCACA GCGGAGCGGTCCCTA TATTTGTATCATTAA TERM 3704 2634281 - 2634313 + F 100 -14.9 -3.39968 | opp_overlap 2634275 2634279, overlap 2634279 2634277 ATGTCAGAAGCGATG GGGATCGCTCTGC CTTCACA GCGGAGCGGTCCC TATATTTGTATCATT TERM 3705 2634705 - 2634725 + G 100 -8.9 -5.95539 | overlap 2634706 AGGCACTTTCTATCA GCGTCGGAC TGA GTCCGGCGA TTTTTTTATTTGGGA TERM 3706 2634706 - 2634724 + G 95 -12.4 -4.15696 | overlap 2634705 GGCACTTTCTATCAG CGTCGGAC TGA GTCCGGCG ATTTTTTTATTTGGG Dhaf_2436 2634368 - 2634754 + | transcriptional modulator of MazE/toxin, MazF Dhaf_2437 2634751 - 2634909 + | hypothetical protein TERM 3707 2635014 - 2635002 - f 78 -4.1 -5.13521 | overlap 2635011 AAAGGAGGGAAAAAA GATGT TAA ACACC AATTTAGCATCGGCG TERM 3708 2636205 - 2636193 - g 73 -5.5 -4.54047 | TGAGCTGAGAGAAAA GGAAC TCC GCTCC AACCGCAAGATAAAC TERM 3709 2636251 - 2636305 + G 100 -12.6 -4.55295 | gap 3, opp_overlap 2636239 2636253, overlap 2636250 ATAGCGCAGTTAACC GAGCAGAATCT-CGT-TCTTGTTCGAC TCAA GTCGAA-GGGATACGTAGATTCTGCTC TTTATTTATCCCAAA Dhaf_2438 2635003 - 2636583 + | Resolvase domain protein Dhaf_2439 2636585 - 2637478 + | Recombinase Dhaf_2440 2637451 - 2639070 + | Resolvase domain protein Dhaf_2441 2639085 - 2639825 + | hypothetical protein Dhaf_2442 2639849 - 2640106 + | hypothetical protein TERM 3710 2640105 - 2640086 - f 78 -7.2 -4.43477 | gap 1, overlap 2640089 GGCAGCCAATCAAAA CAGGGCCAT GAG ATGGC-CTG ATAGGAGGAATCGTG TERM 3711 2640103 - 2640089 - f 72 -10 -2.8867 | overlap 2640086 AGCCAATCAAAACAG GGCCAT GAG ATGGCC TGATAGGAGGAATCG Dhaf_2443 2640121 - 2640402 + | hypothetical protein TERM 3712 2640461 - 2640427 - g 75 -3.5 -5.17507 | gap 1, opp_overlap 2640427, overlap 2640429 2640430 2640450 AAAATGGAAGAAAAA GATTTGCGGGCGGTCT ATAT AGACCGCCTG-AACGC TATGCTTCCGACAGT Dhaf_2444 2640415 - 2640978 + | hypothetical protein TERM 3713 2641403 - 2641383 - g 77 -4 -5.0925 | GTTCAAAAGGAAAAA CCCGAT TGCGCCCTC ATCGGG CAGGACGGCAATATT Dhaf_2445 2641038 - 2641616 + | hypothetical protein TERM 3714 2641661 - 2641630 - f 85 -9.4 -4.09243 | overlap 2641632 2641635 GATACCCTCTTAAAA TATCACCGGCAGAG CTGA CTCTGCCGGGTACA TAAAAACAGGTTCAC TERM 3715 2641659 - 2641632 - f 80 -9.8 -3.6422 | overlap 2641630 2641635 TACCCTCTTAAAATA TCACCGGCAGAG CTGA CTCTGCCGGGTA CATAAAAACAGGTTC TERM 3716 2641656 - 2641635 - f 100 -15.9 -2.93623 | overlap 2641632 2641630 CCTCTTAAAATATCA CCGGCAGAG CTGA CTCTGCCGG GTACATAAAAACAGG TERM 3717 2641999 - 2641985 - g 73 -5.6 -4.65895 | GCTCTCATGGAAAAA GCGCAG TCT CTGAGC TGGACGCAAAACGCC TERM 3718 2642042 - 2642052 + G 83 -6.8 -4.9725 | opp_overlap 2642037 2642041, overlap 2642037 TGCTGCGAAAGCGAT GAGC AGC GCTC TTTTTATATCAGACT TERM 3719 2642238 - 2642251 + G 79 -9.5 -3.86524 | opp_overlap 2642229 2642238 CAGCAACCGTTGAAA CGGCG TGTG CGCCG TTTGTGCCAGCGTGT TERM 3720 2642251 - 2642238 - g 74 -9.5 -3.58037 | opp_overlap 2642238, overlap 2642229 CAGCAACCGTTGAAA CGGCG TGTG CGCCG TTTGTGCCAGCGTGT TERM 3721 2642563 - 2642539 - g 93 -7.8 -5.27476 | overlap 2642541 CGCAATAAAACAAAA TACCCCCGCC GAATT GACGAGGGCA GTTTTGTGCCAGAAC TERM 3722 2642561 - 2642541 - g 77 -8.2 -4.24933 | overlap 2642539 CAATAAAACAAAATA CCCCCGCC GAATT GACGAGGG CAGTTTTGTGCCAGA Dhaf_2446 2641700 - 2642605 + | protein of unknown function DUF1016 TERM 3723 2642921 - 2642954 + F 100 -9 -5.46657 | opp_overlap 2642921 GTATAATTATAACGA CGGTTTGAACGA TTTGAATTCT TCGTTCAAGCCG TTTTTTATTAAGATG Dhaf_2447 2643008 - 2643211 + | hypothetical protein TERM 3724 2643259 - 2643291 + F 91 -7.8 -4.84311 | CTATTATTTCAGAAA GACATGCTTTCTTC GCTAA GGGGAAGGTATGTC TTTTCTTATGTAGAA Dhaf_2448 2643409 - 2643960 + | GCN5-related N-acetyltransferase Dhaf_2449 2644036 - 2644905 + | adenylyltransferase Dhaf_2450 2644951 - 2645391 + | GCN5-related N-acetyltransferase TERM 3725 2645504 - 2645469 - f 90 -11.5 -3.62572 | gap 1, opp_overlap 2645469, overlap 2645473 CATCATGATGCCAAA GAAACCGAT-AATTTC GGCAG GAAATTTATCGGTTTC TTTTTGTTTCCCTAA TERM 3726 2645469 - 2645504 + F 100 -11.5 -5.30616 | gap 1, opp_overlap 2645469 2645473 CATCATGATGCCAAA GAAACCGAT-AATTTC GGCAG GAAATTTATCGGTTTC TTTTTGTTTCCCTAA TERM 3727 2645500 - 2645473 - f 74 -6.5 -4.44448 | gap 1, opp_overlap 2645469, overlap 2645469 ATGATGCCAAAGAAA CCGAT-AATTTC GGCAG GAAATTTATCGG TTTCTTTTTGTTTCC TERM 3728 2645664 - 2645680 + G 73 -2.3 -5.00895 | overlap 2645666 2645675 TACTTACAATAATCA TAGTAAT CGG ATTGCTG TTTTTATCTACTGGG Dhaf_2451 2645621 - 2646004 + | hypothetical protein TERM 3729 2646106 - 2646137 + F 75 -3.1 -5.24129 | CTATTTTTCCAGAAA GGTATAATTTTCC GGCAAA GGGGAGTTATATC TTTTTTGTACAGGAA TERM 3730 2646815 - 2646803 - g 75 -7.7 -4.1466 | ATTTAATGGCGAAAA TGCTG ATA CAGCA CTATCACGATAATTT TERM 3731 2647105 - 2647090 - g 88 -7.5 -5.0916 | GTTGCAATAGAAAAA GCCCG TTTCGG CGGGC AAATCAGTATTGAAT Dhaf_2452 2646244 - 2647470 + | signal transduction histidine kinase, LytS TERM 3732 2647633 - 2647663 + F 100 -12.6 -5.95539 | GTTTAATCATCGCAA CGGTTTGAACGATG GAT CTTCGTTCAGGCCG TTTTTTTGTTTGCCG TERM 3733 2647806 - 2647793 - f 71 -6.7 -4.19342 | opp_overlap 2647793, overlap 2647790 AAAATAATTAAATAA TGACC ATAT GGTCA TTTACAAGTGGAAAA TERM 3734 2648584 - 2648568 - g 88 -2.2 -5.83211 | GATCAAAATAAAAAA CGGC AGAGTGGAA GCCG TTGAAATCAACCGGA Dhaf_2453 2647927 - 2648631 + | ABC transporter related TERM 3735 2649818 - 2649767 - g 74 -10 -3.48395 | gap 1 ATTCGCCGGATATAA TGCCTGCCGCAAGGAGCTGCGCCTG GTA CCGGCGGAG-TCCATGCGGCCGAAA CCGCCCGCTTCCGGC Dhaf_2454 2648631 - 2651009 + | protein of unknown function DUF214 Dhaf_2455 2651041 - 2652216 + | efflux transporter, RND family, MFP subunit Dhaf_2456 2652276 - 2652911 + | transcriptional regulator, TetR family TERM 3736 2653042 - 2653086 + F 100 -16.8 -3.18728 | gap 1, opp_overlap 2653045, overlap 2653045 CTTTCTTGAGTAATC TAATAGAGGGGTTTGC-TTCT TACT AGAAAGCAAACCCCTCTATGA TTACATGTTCAGAAT TERM 3737 2653045 - 2653083 + F 100 -18.5 -2.7898 | gap 1, opp_overlap 2653045, overlap 2653042 TCTTGAGTAATCTAA TAGAGGGGTTTGC-TTCT TACT AGAAAGCAAACCCCTCTA TGATTACATGTTCAG TERM 3738 2653083 - 2653045 - f 100 -18.5 -3.20723 | gap 1, opp_overlap 2653042 2653045 TCTTGAGTAATCTAA TAGAGGGGTTTGC-TTCT TACT AGAAAGCAAACCCCTCTA TGATTACATGTTCAG TERM 3739 2653287 - 2653247 - f 100 -22 -4.2573 | opp_overlap 2653247 GAAATAATCCGAAAA GGAACCGGCGGCGGGA AGCAGAAAA TCCCACCGCCGGTTCC TTTTGAATAGAAGGG TERM 3740 2653247 - 2653287 + F 100 -19.8 -4.18018 | opp_overlap 2653247 GAAATAATCCGAAAA GGAACCGGCGGCGGGA AGCAGAAAA TCCCACCGCCGGTTCC TTTTGAATAGAAGGG Dhaf_2457 2653360 - 2654310 + | diguanylate cyclase Dhaf_2458 2654440 - 2654949 + | GCN5-related N-acetyltransferase TERM 3741 2654987 - 2655013 + F 87 -5.2 -5.42514 | opp_overlap 2654982 GATCTAAAAATGAAG TCATCCTCAT CTTCATC ATGGGGGTGA TTTTTTAATTTCTAA TERM 3742 2655283 - 2655297 + G 100 -5.6 -6.17268 | TCGTGTCCTACCTCC TGGGCG GCA CGGCCA TTTTTTTTATTGTCA TERM 3743 2655341 - 2655355 + G 73 -3.5 -4.84363 | gap 1, overlap 2655341 GATGTGTGTCGATCA GC-CCG TTGC CGGCGC TTTTTCATACTTTGC Dhaf_2459 2655123 - 2656511 + | amino acid permease-associated region TERM 3744 2656654 - 2656643 - g 74 -4.4 -4.85599 | CTTATCGCATAAAAA TGGT GGAA ACCA TGCGCATGATATCCA TERM 3745 2657171 - 2657185 + G 71 -8.5 -3.6502 | TTACCTGCAACTCCG CCGGC GGGCA GCCGG TTTCGATGGAGAATA TERM 3746 2657574 - 2657564 - g 71 -8.2 -3.62176 | AAGAATACCTGGAAA GCCG CAT CGGC CAGGTAGAATACTTA Dhaf_2460 2656609 - 2658030 + | Tryptophanase TERM 3747 2658071 - 2658123 + F 100 -21 -3.25102 | gap 1, opp_overlap 2658078, overlap 2658078 AAACCTTGTCTTGTC GGC-CAAAGGGGGTTTTGGAATGAA TTAT TTCGTTTCAAAACCCCCTTTGCGTC TATTCTCCGTCAAAT TERM 3748 2658115 - 2658078 - f 100 -14.3 -3.53012 | opp_overlap 2658071 2658078 GTCTTGTCGGCCAAA GGGGGTTTTGGAATGAA TTAT TTCGTTTCAAAACCCCC TTTGCGTCTATTCTC TERM 3749 2658078 - 2658115 + F 100 -18.7 -3.77846 | opp_overlap 2658078, overlap 2658071 GTCTTGTCGGCCAAA GGGGGTTTTGGAATGAA TTAT TTCGTTTCAAAACCCCC TTTGCGTCTATTCTC Dhaf_2461 2658260 - 2658733 + | transcriptional regulator, MarR family TERM 3750 2658786 - 2658753 - f 77 -10.9 -2.77118 | opp_overlap 2658755, overlap 2658750 2658749 CATAGGGAAAAGCCA CAGGCAGCCCAACTC AAGC GAGGAGGGCTGCCTT TTATTGCGATTATTT TERM 3751 2658755 - 2658784 + F 100 -13.5 -4.68705 | opp_overlap 2658753 2658750 2658749 TAGGGAAAAGCCACA GGCAGCCCAACTC AAGC GAGGAGGGCTGCC TTTTATTGCGATTAT TERM 3752 2659804 - 2659784 - g 76 -11.1 -3.13867 | opp_overlap 2659776, overlap 2659772 2659782 2659780 TTAGTGATCAACAGA TCGCCATGC TGG GCATGGCGG CGGAGATTATCGGCT TERM 3753 2659831 - 2659841 + G 80 -8.2 -4.34759 | GGCTACAGCTTTATT GCCG CAT CGGC TTTGTTCGTATTCTA Dhaf_2462 2658898 - 2660133 + | major facilitator superfamily MFS_1 TERM 3754 2660235 - 2660198 - T 100 -19.5 -3.90588 | opp_overlap 2660198 TAGGGTTCAATTAAA TAGGGTATCAGAACCTA TTCT TAAGTTCTGATACCCTA TTTGTCTACAGTCTG TERM 3755 2660198 - 2660235 + T 100 -17.3 -4.05747 | opp_overlap 2660198 TAGGGTTCAATTAAA TAGGGTATCAGAACCTA TTCT TAAGTTCTGATACCCTA TTTGTCTACAGTCTG Dhaf_2463 2660695 - 2660318 - | endoribonuclease L-PSP TERM 3756 2661142 - 2661156 + G 80 -7 -4.59853 | opp_overlap 2661142 2661144, overlap 2661144 GCCCTCCGGGGAGAA GAGCCG GTA CGGCGC TTTTTAGAGAGTTCC Dhaf_2464 2660893 - 2661372 + | metal dependent phosphohydrolase TERM 3757 2661379 - 2661424 + T 73 -8.4 -3.65231 | gap 1, opp_overlap 2661379 2661380 2661382, overlap 2661379 2661380 2661382 2661413 GAGAGTTAAGAATAA GGAGACACTTTGCTTCCTCCA GGGAA TGGATGG-GCAGAGTGTCTCA CTTTGTTTTTTACTT TERM 3758 2661379 - 2661425 + T 100 -8.2 -5.14819 | opp_overlap 2661379 2661380 2661382, overlap 2661379 2661380 2661382 2661413 GAGAGTTAAGAATAA G-GAGACACTTTGCTTCCTCCA GGGAA TGGATGG-GCAGAGTGTCTCAC TTTGTTTTTTACTTT TERM 3759 2661380 - 2661423 + T 83 -11.9 -2.76698 | gap 1, opp_overlap 2661380 2661379 2661382, overlap 2661379 2661379 2661382 2661413 AGAGTTAAGAATAAG GAGACACTTTGCTTCCTCCA GGGAA TGGATGG-GCAGAGTGTCTC ACTTTGTTTTTTACT TERM 3760 2661413 - 2661429 + T 95 -7.3 -5.56112 | opp_overlap 2661382 2661380 2661379, overlap 2661382 2661380 2661379 2661379 CAGGGAATGGATGGG CAGAGTG TCT CACTTTG TTTTTTACTTTTTAT Dhaf_2465 2662213 - 2661434 - | hypothetical protein TERM 3761 2662178 - 2662192 + g 78 -11.4 -3.03036 | overlap 2662176 CACGATTAAGCCGAT GCCGGT TAT ACCGGC TAATATTTTCTTGAT Dhaf_2466 2662768 - 2662220 - | hypothetical protein Dhaf_2467 2663267 - 2662761 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 3762 2664466 - 2664478 + G 75 -7.7 -4.2803 | CAATGGCAGGCTGAT CAAGG AAC CCTTG TTTTAACTTGCGCTA Dhaf_2468 2663488 - 2666109 + | DNA polymerase I Dhaf_2469 2666207 - 2667028 + | formamidopyrimidine-DNA glycosylase TERM 3763 2667182 - 2667206 + F 100 -13.7 -3.86015 | TCCTGCCTCATAGCG GGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCAGAGTG TERM 3764 2668757 - 2668767 + G 71 -8.2 -3.68341 | TCTCTGTAGAGTTTC CCGG GCG CCGG TTGTTCCATGGAGTT TERM 3765 2669024 - 2669034 + G 73 -8.2 -3.91897 | TTCGCAGCCTGCTGG CCCG TTT CGGG TTTGTGGGTGAGGAG TERM 3766 2669105 - 2669090 - g 76 -2.5 -5.24129 | gap 1 GCGGGGGAGAAAAAA GCC-GG CTGGC CCTGGC TAAGCTCTTCCTCTC Dhaf_2470 2667772 - 2669634 + | ABC transporter related Dhaf_2471 2669702 - 2670358 + | sporulation protein YtaF TERM 3767 2670522 - 2670540 + G 85 -11.7 -3.74251 | opp_overlap 2670521 2670511 TGAACCGGAGACGAT GGCAGCC ATTAC GGCTGCC TTTGGTCAGGATATC Dhaf_2472 2670388 - 2670990 + | dephospho-CoA kinase Dhaf_2473 2671172 - 2671771 + | Lytic transglycosylase catalytic TERM 3768 2671778 - 2671757 - T 100 -12.3 -4.59773 | opp_overlap 2671757 CTTTATGGTGAAAAA CCACGCCTC AAAT GAAGCGTGG TTTTTTGCTGGATGA TERM 3769 2671757 - 2671778 + T 100 -10.1 -5.1675 | opp_overlap 2671757 CTTTATGGTGAAAAA CCACGCCTC AAAT GAAGCGTGG TTTTTTGCTGGATGA Dhaf_2474 2672171 - 2671800 - | Ion transport 2 domain protein TERM 3770 2672245 - 2672233 - H 70 -3.5 -4.76191 | overlap 2672224 ATACAGTAAAACAAA TTTTA TCA TAAAA GATTAATCCGATACA Dhaf_2475 2672416 - 2673297 + | Thioredoxin-disulfide reductase TERM 3771 2673371 - 2673330 - f 80 -8.9 -3.9941 | opp_overlap 2673331, overlap 2673326 2673331 TCTCTCATAAGTAAA GGCCCGCCCC-AATATGAA TAAACC TTCGTATTAGGGGCGG-CC TTTTAGCTATAAATC TERM 3772 2673331 - 2673371 + F 100 -11.3 -4.24204 | gap 1, opp_overlap 2673330 2673326 2673331 CTCTCATAAGTAAAG GCCCGCCCC-AATATGAA TAAACC TTCGTATTAGGGGCGGCC TTTTAGCTATAAATC TERM 3773 2674000 - 2674010 + G 73 -2.4 -5.02074 | TCGGCCATGAAAAGC CCAG TGT CCGG TTTTTTGAGGAGTGC TERM 3774 2674105 - 2674127 + G 80 -12.1 -2.78463 | opp_overlap 2674105 TGGTCGGGGCCCAAA CCAGCAAGA TGGAC TCTTGCTGG TATAATCCCAAGCAT TERM 3775 2674127 - 2674105 - g 86 -12.1 -3.53012 | opp_overlap 2674105 TGGTCGGGGCCCAAA CCAGCAAGA TGGAC TCTTGCTGG TATAATCCCAAGCAT Dhaf_2476 2673540 - 2674217 + | HAD-superfamily hydrolase, subfamily IA, variant 1 TERM 3776 2674953 - 2674966 + G 71 -3.8 -4.77165 | GAACCGGAGGATATT GCCA ACATGG TGGC TTTTCTTGTGAGCGG Dhaf_2477 2674347 - 2675057 + | short-chain dehydrogenase/reductase SDR TERM 3777 2675082 - 2675065 - T 72 -7.1 -3.96542 | opp_overlap 2675065 CGAAATAAATTTAAA TTACCAA CCGA TTGGTAA TTTGCCCAATAAGAA TERM 3778 2675100 - 2675139 + T 100 -12.2 -4.30719 | opp_overlap 2675100 TGCCCAATAAGAAAA GGCAGTTGCCAAGAAACT TTAA AGTTCACTGGCAACTGCC TTTCTTCTCAGGCAC TERM 3779 2675139 - 2675100 - T 100 -16.6 -4.89477 | opp_overlap 2675100 TGCCCAATAAGAAAA GGCAGTTGCCAAGAAACT TTAA AGTTCACTGGCAACTGCC TTTCTTCTCAGGCAC TERM 3780 2675235 - 2675212 - T 74 -8 -3.9243 | TAACCCTTTAAATAA CCGCCGCCCC CTCC GAGTCGACGG AGAGGAGGTAGGCCT Dhaf_2478 2676097 - 2675204 - | homoserine kinase TERM 3781 2675557 - 2675571 + g 82 -5.6 -5.08824 | GGGAAATGGAGGCAG GCAGCA CAT TGCGGC TTTTTTCGGTGGACA Dhaf_2479 2677432 - 2676137 - | Homoserine dehydrogenase TERM 3782 2676269 - 2676280 + g 89 -3.6 -5.69068 | overlap 2676256 GACCAGGACGATTTC CGCT TCCT GGCG TTTTTTCTGTTTTTG TERM 3783 2677819 - 2677833 + H 82 -5.6 -5.03227 | opp_overlap 2677818 2677819 GGGCATGCTTTAAAG CTCGGT GAA GCCGGG TTTTCTTTATAATAT Dhaf_2480 2677903 - 2678784 + | branched-chain amino acid aminotransferase TERM 3784 2679089 - 2679099 + G 80 -8.2 -4.4595 | opp_overlap 2679089 2679088 GGGATCCGGGAAAAC GGGG GAA CCCC TTTTGAGTTTTCTAC Dhaf_2481 2678897 - 2680588 + | dihydroxy-acid dehydratase TERM 3785 2681378 - 2681356 - g 73 -8.5 -3.86194 | gap 1, overlap 2681359 AAGCCTGCCCACAAA CCA-CCCCAA TGTT TTGGGGATGG TAGGGATGCACGGAA TERM 3786 2681884 - 2681903 + G 73 -3.5 -4.98255 | CCTCGGAGCTCAAGT CGCTGCT CCTGAA AGCACCG TTTTTCTGGTTACAG Dhaf_2482 2680595 - 2682280 + | acetolactate synthase, large subunit, biosynthetic type Dhaf_2483 2682286 - 2682765 + | acetolactate synthase, small subunit TERM 3787 2683848 - 2683828 - g 79 -2.5 -5.48163 | overlap 2683829 AAAGAAATGAAAAAA GTCCTGG CGGAAAT CCAGGAT GGCACCTTTGCCAAG Dhaf_2484 2682997 - 2683998 + | ketol-acid reductoisomerase TERM 3788 2684169 - 2684202 + F 82 -10.4 -3.58726 | opp_overlap 2684167 2684170 2684172, overlap 2684170 2684172 GTTTATCAGATAATG ACATGCGCTTTGTT TGTAAT GACAAAGCGCATGG TTCTATATAAGAGGA TERM 3789 2684201 - 2684170 - f 95 -13.2 -2.9062 | opp_overlap 2684170 2684169 2684172, overlap 2684167 2684172 TTTATCAGATAATGA CATGCGCTTTGT TTGTAATG ACAAAGCGCATG GTTCTATATAAGAGG TERM 3790 2684170 - 2684201 + F 95 -13.9 -2.75022 | opp_overlap 2684167 2684170 2684172, overlap 2684169 2684172 TTTATCAGATAATGA CATGCGCTTTGTT TGTAAT GACAAAGCGCATG GTTCTATATAAGAGG TERM 3791 2684172 - 2684199 + F 79 -10.7 -2.91997 | opp_overlap 2684170 2684167 2684172, overlap 2684170 2684169 TATCAGATAATGACA TGCGCTTTGTT TGTAAT GACAAAGCGCA TGGTTCTATATAAGA TERM 3792 2684199 - 2684172 - f 73 -10 -3.00164 | opp_overlap 2684172 2684170 2684169, overlap 2684170 2684167 TATCAGATAATGACA TGCGCTTTGT TTGTAATG ACAAAGCGCA TGGTTCTATATAAGA TERM 3793 2684419 - 2684405 - g 70 -10 -3.21276 | opp_overlap 2684417, overlap 2684403 2684409 CCGTTTGGGATAAGA CCAAGG TCG CCTTGG TTCCCGACCACTTTA TERM 3794 2684922 - 2684910 - g 74 -9.1 -3.67775 | AGCGGGAGCCAAGAA CGGGA TTA TCCCG CCCGATGAAAAGACC Dhaf_2485 2684224 - 2685498 + | 3-isopropylmalate dehydratase, large subunit TERM 3795 2685662 - 2685638 - g 71 -6.4 -4.14764 | gap 1, opp_overlap 2685656, overlap 2685639 TGCTAAAGAAGTAAA GTCCGGCGATG TGAT CATCGGCGG-C AAAAACTTTGGCTGC Dhaf_2486 2685498 - 2685986 + | 3-isopropylmalate dehydratase, small subunit Dhaf_2487 2685979 - 2687037 + | 3-isopropylmalate dehydrogenase TERM 3796 2687116 - 2687151 + T 100 -15.6 -3.55622 | gap 1, opp_overlap 2687122, overlap 2687122 2687140 ATATAATATGCTCAC CGCAAAGCCCCAGGG TCATTAT CCCTGGGGCTTT-CG TTTACCCCGGTTCGC TERM 3797 2687122 - 2687146 + T 100 -14.3 -4.05788 | opp_overlap 2687122, overlap 2687116 2687140 TATGCTCACCGCAAA GCCCCAGGG TCATTAT CCCTGGGGC TTTCGTTTACCCCGG TERM 3798 2687146 - 2687122 - T 100 -14.3 -3.60296 | opp_overlap 2687122 2687116 2687140 TATGCTCACCGCAAA GCCCCAGGG TCATTAT CCCTGGGGC TTTCGTTTACCCCGG Dhaf_2488 2688590 - 2687202 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2489 2689073 - 2688624 - | hypothetical protein TERM 3799 2689912 - 2689898 - H 78 -4.2 -5.17786 | overlap 2689903 TAAGAAAACCAAAAA GAATGC CAA GCAATC GGAAAAACAAAATAA TERM 3800 2689983 - 2690024 + H 100 -15.3 -3.272 | overlap 2689985 2689995 CCATAGTCCCCGCTG CATGTCCCAGAGCGCGACA ACGT TGTCGTGTTTTGGGACATC TTAGTATGAGCTCAT TERM 3801 2689985 - 2690022 + H 100 -17.9 -3.20078 | overlap 2689983 2689995 ATAGTCCCCGCTGCA TGTCCCAGAGCGCGACA ACGT TGTCGTGTTTTGGGACA TCTTAGTATGAGCTC TERM 3802 2689995 - 2690012 + H 76 -7.7 -4.11371 | overlap 2689985 2689983 CTGCATGTCCCAGAG CGCGACA ACGT TGTCGTG TTTTGGGACATCTTA Dhaf_2490 2690136 - 2690474 + | transcriptional regulator, PadR-like family TERM 3803 2691013 - 2691023 + G 73 -2.4 -5.14682 | CAGAATGCTCCTGAC CGGC CTT GGCG TTTTGTTTATTATCC Dhaf_2491 2690471 - 2691100 + | hypothetical protein Dhaf_2492 2691145 - 2692053 + | Helix-turn-helix type 11 domain protein Dhaf_2493 2692113 - 2692505 + | Glyoxalase/bleomycin resistance protein/dioxygenase TERM 3804 2692604 - 2692556 - T 100 -14.8 -3.20901 | gap 1, opp_overlap 2692551 2692568, overlap 2692558 2692560 2692568 ACCCCATGAATGTAA CAGACAGCAAAACAGCCTAACCA AAAC CGGCCAGGCTGTTTTGCTGTA-G AAATATTTCTTTAAT TERM 3805 2692603 - 2692558 - T 100 -18.5 -3.16676 | opp_overlap 2692551 2692568, overlap 2692556 2692560 2692568 CCCATGAATGTAACA GACAGCAAAACAGCCTAACCA AAAC CGGCCAGGCTGTTTTGCTGTA GAAATATTTCTTTAA TERM 3806 2692601 - 2692560 - T 100 -21.1 -3.14234 | opp_overlap 2692551 2692568, overlap 2692558 2692556 2692568 CATGAATGTAACAGA CAGCAAAACAGCCTAACCA AAAC CGGCCAGGCTGTTTTGCTG TAGAAATATTTCTTT TERM 3807 2692593 - 2692568 - T 100 -9.7 -4.4296 | opp_overlap 2692551 2692568, overlap 2692560 2692558 2692556 TAACAGACAGCAAAA CAGCCTAACCA AAAC CGGCCAGGCTG TTTTGCTGTAGAAAT Dhaf_2494 2693900 - 2692737 - | hypothetical protein TERM 3808 2694036 - 2693992 - R 100 -18.1 -4.20367 | gap 1, opp_overlap 2693985 2694000 TGGGGGAACAAAGAA GCACCTCCCAGTCTGTGACA GTGGTA TG-CACAGACCAGGAGGTGC TCAGCGTTAATCTTT Dhaf_2495 2694489 - 2694043 - | hypothetical protein Dhaf_2496 2694688 - 2694479 - | transcriptional regulator, XRE family TERM 3809 2694885 - 2694859 - R 89 -3.6 -5.60556 | opp_overlap 2694878 AAGAGAAAAGAAAAA GATCCAGTGACC TAG GACGGCTGGATC TCCAGAATATTATCG Dhaf_2497 2696196 - 2694967 - | ABC transporter EcsB Dhaf_2498 2696903 - 2696193 - | ABC transporter related Dhaf_2499 2700187 - 2696939 - | Non-specific serine/threonine protein kinase TERM 3810 2697408 - 2697388 - G 87 -6.7 -5.07107 | overlap 2697377 TAAACTGGGAAAAAA CCAGCACCC GGT GGCCGCCGG CTAAACTATCCTCTA TERM 3811 2697666 - 2697685 + g 75 -3.6 -5.03314 | gap 1, overlap 2697670 GTCTCGATCTTCGGG GGCAGTTCT TTC AGAAC-GTC TTTTTTAAGCCTGCG TERM 3812 2700571 - 2700606 + H 91 -6.3 -5.47218 | gap 1, overlap 2700566 2700575 2700576 GGTGGTACCGCGGAA GACTTCTTTCGTCCTT GGCAA AGGGATGAAAG-GGTC TTTTTTTACATAGAA Dhaf_2500 2700638 - 2701441 + | pyrroline-5-carboxylate reductase TERM 3813 2702334 - 2702318 - g 78 -5.1 -5.00138 | overlap 2702298 TACTCAAAGGAAAAA GCCTG CTGGCTT CAGGC ATTACCGGCATCGAC Dhaf_2501 2701438 - 2702547 + | glutamate 5-kinase Dhaf_2502 2702667 - 2703920 + | gamma-glutamyl phosphate reductase TERM 3814 2704077 - 2704019 - T 73 -8.5 -3.70109 | gap 3, opp_overlap 2704021 2704023 2704027 2704030, overlap 2704021 2704030 2704032 2704035 GATATCATGGAAGAA TAGCCAGCGAAGAGAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTCTCT-C-CTGTCT- TTAGCACTCTTTCCT TERM 3815 2704076 - 2704021 - T 100 -13.6 -3.42702 | gap 2, opp_overlap 2704021 2704023 2704027 2704030, overlap 2704019 2704030 2704032 2704035 TATCATGGAAGAATA GCCAGCGAAGAGAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTCTCT-C-CTGTC TTTAGCACTCTTTCC TERM 3816 2704021 - 2704076 + T 100 -13.6 -3.62518 | gap 2, opp_overlap 2704019 2704021 2704030 2704032 2704035, overlap 2704023 2704027 2704030 TATCATGGAAGAATA GCCAGCGAAGAGAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTCTCT-C-CTGTC TTTAGCACTCTTTCC TERM 3817 2704023 - 2704074 + T 100 -14.8 -3.38603 | gap 2, opp_overlap 2704021 2704019 2704030 2704032 2704035, overlap 2704021 2704027 2704030 TCATGGAAGAATAGC CAGCGAAGAGAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTCTCT-C-CTG TCTTTAGCACTCTTT TERM 3818 2704027 - 2704072 + T 100 -17.8 -3.25472 | opp_overlap 2704021 2704019 2704030 2704032 2704035, overlap 2704023 2704021 2704030 GGAAGAATAGCCAGC GAAGAGAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTCTCTCC TGTCTTTAGCACTCT TERM 3819 2704069 - 2704030 - T 100 -18.1 -3.10255 | opp_overlap 2704030 2704027 2704023 2704021, overlap 2704021 2704019 2704032 2704035 AGAATAGCCAGCGAA GAGAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTCTC TCCTGTCTTTAGCAC TERM 3820 2704030 - 2704069 + T 100 -18.1 -2.80821 | opp_overlap 2704021 2704019 2704030 2704032 2704035, overlap 2704027 2704023 2704021 AGAATAGCCAGCGAA GAGAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTCTC TCCTGTCTTTAGCAC TERM 3821 2704067 - 2704032 - T 100 -14.9 -3.10622 | opp_overlap 2704030 2704027 2704023 2704021, overlap 2704030 2704021 2704019 2704035 AATAGCCAGCGAAGA GAAGCAGGTGTGTCA CACCCC TTACACACCTGCTTC TCTCCTGTCTTTAGC TERM 3822 2704064 - 2704035 - T 84 -10.8 -3.69256 | opp_overlap 2704030 2704027 2704023 2704021, overlap 2704032 2704030 2704021 2704019 AGCCAGCGAAGAGAA GCAGGTGTGTCA CACCCC TTACACACCTGC TTCTCTCCTGTCTTT Dhaf_2503 2704733 - 2704122 - | hypothetical protein TERM 3823 2704823 - 2704798 - R 100 -20.5 -4.89063 | opp_overlap 2704794 TCAGTTAAAAAGAAA GGGCTGCCGCA ACGT TGCGGCAGCCC CAAGTGGTTAGTTGT Dhaf_2504 2706067 - 2704847 - | hypothetical protein Dhaf_2505 2706517 - 2706645 + | hypothetical protein Dhaf_2506 2706719 - 2707717 + | hypothetical protein TERM 3824 2708232 - 2708255 + G 73 -10.2 -3.24747 | GCAGGTATTATGACT GCCGGTACAG CTGT CGGTGCCGGC TTCCTGCTCTCGGGC TERM 3825 2709508 - 2709491 - g 71 -4.1 -4.66833 | TCCTAACCCCAAAAA GGGTC TTATGTTT GACCC GGCTTGCATCGCCAT Dhaf_2507 2708151 - 2709959 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 3826 2710049 - 2710076 + F 100 -18.6 -4.88918 | opp_overlap 2710042 2710039 2710054 CTAAAGGACCCATCA CCAGACCTCAGA GCAA TCTGAGGTCTGG TTTTATTTGCAATGC TERM 3827 2710071 - 2710054 - f 72 -9.9 -2.83164 | opp_overlap 2710049, overlap 2710042 2710039 GGACCCATCACCAGA CCTCAGA GCAA TCTGAGG TCTGGTTTTATTTGC Dhaf_2508 2710209 - 2710520 + | hypothetical protein TERM 3828 2710543 - 2710582 + F 100 -17.6 -3.88498 | gap 1, opp_overlap 2710543 2710547, overlap 2710547 ATGAAACAATAACGA TAAACCAGACCTTTCAACT CAT AGTT-AAAGGTCTGGTTTA TTTACTCTGTGGCAA TERM 3829 2710582 - 2710543 - f 100 -17.6 -3.07958 | gap 1, opp_overlap 2710543 2710547, overlap 2710547 ATGAAACAATAACGA TAAACCAGACCTTTCAACT CAT AGTT-AAAGGTCTGGTTTA TTTACTCTGTGGCAA TERM 3830 2710578 - 2710547 - f 100 -14 -4.16767 | gap 1, opp_overlap 2710547 2710543, overlap 2710543 AACAATAACGATAAA CCAGACCTTTCAACT CAT AGTT-AAAGGTCTGG TTTATTTACTCTGTG TERM 3831 2710547 - 2710578 + F 100 -14 -4.55209 | gap 1, opp_overlap 2710543 2710547, overlap 2710543 AACAATAACGATAAA CCAGACCTTTCAACT CAT AGTT-AAAGGTCTGG TTTATTTACTCTGTG TERM 3832 2710812 - 2710798 - g 71 -2.8 -4.98061 | opp_overlap 2710798, overlap 2710800 AGATACTAAAGAAAA TTTGCA TGA TGCACA TAATTTAATTCTAAC TERM 3833 2711937 - 2711919 - g 80 -7.4 -4.5123 | opp_overlap 2711919 2711918 2711930 AAGCCATCAAAGAAA CGATTTCC TTA GGAAAACG CTTTTCCTTATCCAA Dhaf_2509 2710778 - 2712868 + | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 3834 2712891 - 2712927 + F 100 -11.7 -4.72486 | gap 1, opp_overlap 2712891 GTAATCTCAAGATAA GGGCTTCT-CCTGAAC AGCTGA GTGCAGGGAGAAGCCC TTTTTGCCGTTTATA TERM 3835 2712927 - 2712891 - f 90 -11.7 -3.69069 | gap 1, opp_overlap 2712891 GTAATCTCAAGATAA GGGCTTCT-CCTGAAC AGCTGA GTGCAGGGAGAAGCCC TTTTTGCCGTTTATA Dhaf_2510 2713142 - 2713354 + | hypothetical protein TERM 3836 2715171 - 2715154 - g 71 -2.6 -4.97461 | overlap 2715156 AAGAAATATGAAAAA GGCCTG TTGCGC CAGGAC GGGCAGCCGGGCTTT Dhaf_2511 2713444 - 2715774 + | molybdopterin oxidoreductase Dhaf_2512 2715761 - 2716105 + | putative oxidoreductase iron-sulfur subunit Dhaf_2513 2716140 - 2716277 + | hypothetical protein TERM 3837 2716282 - 2716339 + F 73 -8.5 -3.65522 | gap 1, opp_overlap 2716288, overlap 2716283 2716287 2716288 CTAAGAAGTAGACTT ACAATAGGTTAGGGTCAGGATCCCTGTG GTT CATGGGGATCTTGATCCTCCCC-GTTGA TTATTCCAATAGCTC TERM 3838 2716283 - 2716338 + F 83 -12 -2.78992 | gap 1, opp_overlap 2716288, overlap 2716282 2716287 2716288 TAAGAAGTAGACTTA CAATAGGTTAGGGTCAGGATCCCTGTG GTT CATGGGGATCTTGATCCTCCCC-GTTG ATTATTCCAATAGCT TERM 3839 2716287 - 2716335 + F 89 -11.7 -3.54158 | opp_overlap 2716288, overlap 2716283 2716282 2716288 AAGTAGACTTACAAT AGGTTAGGGTCAGGATCCCTGTG GTT CATGGGGATCTTGATCCTCCCCG TTGATTATTCCAATA TERM 3840 2716288 - 2716334 + F 100 -15.2 -2.72013 | opp_overlap 2716288, overlap 2716287 2716283 2716282 AGTAGACTTACAATA GGTTAGGGTCAGGATCCCTGTG GTT CATGGGGATCTTGATCCTCCCC GTTGATTATTCCAAT Dhaf_2514 2716422 - 2717999 + | L-lactate permease family protein, putative Dhaf_2515 2718234 - 2719370 + | ribosomal-protein-alanine acetyltransferase TERM 3841 2719943 - 2719953 + G 76 -2.4 -5.31059 | GAGAACAGCTTTATT CGGC ATA GCAG TTTTTTCCTTGATAT Dhaf_2516 2719413 - 2720753 + | major facilitator superfamily MFS_1 TERM 3842 2720831 - 2720858 + F 100 -11.4 -4.88736 | gap 1 TGCAGAAAGCAGCGA TCTGGCGGGCGAT GTT AT-GCCCGTCAGA TTTTTATGACTGCTC TERM 3843 2721608 - 2721629 + G 71 -7.3 -4.04806 | opp_overlap 2721607 TGATGTTTAATTCAT TGATTGCAG CACA CAGCAATCA TTCTTTCATCTACAA Dhaf_2517 2721025 - 2722053 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3844 2722266 - 2722246 - f 78 -9.8 -3.41229 | opp_overlap 2722246 ATATGTTTATTAGAA TACAGACC TACCC GGTCTGTA TTTTTTATATCCGCC TERM 3845 2722246 - 2722266 + F 100 -9.8 -5.36441 | opp_overlap 2722246 ATATGTTTATTAGAA TACAGACC TACCC GGTCTGTA TTTTTTATATCCGCC TERM 3846 2722363 - 2722350 - g 71 -3.1 -4.84262 | CAAGAAGCAAGAAAA GGAAT CATT ACTCC GGAAATGGTCCAAGC Dhaf_2518 2722323 - 2723621 + | thiamine biosynthesis protein ThiC TERM 3847 2723757 - 2723747 - g 73 -3.2 -4.93177 | GAAAAACTAACAAAA GCTC TTC AAGC CCTCAAACACAAAAC TERM 3848 2724306 - 2724336 + G 80 -7.5 -4.58283 | gap 1, overlap 2724302 CCCGGATCACGGGGG CCGGCTG-CATGGC CGGG GCCTTGGTGGCCGG TTTTTGCGGAGCTTA Dhaf_2519 2723726 - 2724529 + | Hydroxyethylthiazole kinase Dhaf_2520 2724520 - 2725143 + | thiamine-phosphate pyrophosphorylase TERM 3849 2725356 - 2725367 + G 70 -2.2 -4.87318 | ATGGATCAGGCGGTG TTCG ATCC CGGA TTTTTAGATTTTGCC Dhaf_2521 2725131 - 2725796 + | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase Dhaf_2522 2725793 - 2726581 + | phosphomethylpyrimidine kinase TERM 3850 2726848 - 2726821 - f 80 -3.6 -5.28315 | gap 1, overlap 2726813 ACAAAAGGCAAAAAA GATTTA-TTGCTT ACA AAGCCAGTAAATC CAAGCCTTTCGAGGG TERM 3851 2726861 - 2726888 + F 85 -5.6 -5.19261 | opp_overlap 2726852, overlap 2726864 ATCCAAGCCTTTCGA GGGCTTCCAC GATGAAAA GTGGAAGTTC TTTTTTCGTAGATTT TERM 3852 2726864 - 2726885 + F 75 -5.9 -4.67552 | overlap 2726861 CAAGCCTTTCGAGGG CTTCCAC GATGAAAA GTGGAAG TTCTTTTTTCGTAGA TERM 3853 2727421 - 2727407 - g 79 -3.6 -5.29385 | AAGCTAACCAAAAAA GCAATA GAA TATTAC GAATCTAAAAACCTG Dhaf_2524 2727362 - 2728258 + | transcriptional regulator, MerR family TERM 3854 2728459 - 2728428 - f 86 -5.9 -5.252 | opp_overlap 2728423 2728428 CATCTTTACAAAAAA GACATAGCTTTTC ACCAAG GAATTGCTATGTC TTTTCTTTAACGATA TERM 3855 2728428 - 2728459 + F 78 -5.9 -4.87803 | opp_overlap 2728428, overlap 2728423 CATCTTTACAAAAAA GACATAGCTTTTC ACCAAG GAATTGCTATGTC TTTTCTTTAACGATA Dhaf_2525 2728570 - 2729115 + | hypothetical protein TERM 3856 2729160 - 2729211 + F 80 -10.4 -3.4072 | gap 1, opp_overlap 2729170 2729199 2729201, overlap 2729166 CCGGAGGCCTTGTGT CATGAGGGAATTGTTTGCTCAA-AG TTT CTATTGAGCAAACACATCCTTGATG TTATAATAAAACGTA TERM 3857 2729166 - 2729205 + F 80 -10.2 -3.43203 | gap 1, opp_overlap 2729170 2729199 2729201, overlap 2729160 GCCTTGTGTCATGAG GGAATTGTTTGCTCAA-AG TTT CTATTGAGCAAACACATCC TTGATGTTATAATAA TERM 3858 2729318 - 2729340 + F 77 -3.5 -5.24416 | gap 1, opp_overlap 2729320, overlap 2729320 AGCGGCAAAAGACAT GA-TCCCATT CCAG AATGGGGCTC TTTTTGTTGTGCTTA TERM 3859 2729405 - 2729384 - f 73 -7.3 -4.07647 | opp_overlap 2729384 2729383 ACATGGTAAAGGAAA GGGAAACTC CCAG GAGTTTGCC GATTTTCTGATGGTG TERM 3860 2729926 - 2729938 + G 80 -9.1 -4.25104 | TCTCCAGCCCTGAAT GCGGT GAC ACCGC TTTTGGTCCCGGAGG Dhaf_2526 2729551 - 2730786 + | H+ Antiporter protein Dhaf_2527 2730848 - 2731642 + | alpha/beta hydrolase fold protein TERM 3861 2732528 - 2732547 + G 80 -8.6 -4.41616 | TATAAGGTCATGGGC GGGTTCCA CGCC TGGAACTC TTTCTTTGAAGGGCT Dhaf_2528 2731799 - 2733541 + | ABC transporter related Dhaf_2529 2733574 - 2734695 + | 6-phosphofructokinase Dhaf_2530 2734789 - 2735262 + | protein of unknown function DUF456 Dhaf_2531 2735303 - 2736178 + | GCN5-related N-acetyltransferase TERM 3862 2736230 - 2736174 - f 100 -24.1 -2.64803 | opp_overlap 2736174 2736176 2736179 2736185, overlap 2736179 2736185 TTATGTCTAAACGCA CATAATCCAAACCCTTCATCAACAGGT AAA ATCTGCTGGCGAAGGGTTTGGATTATG TTACATAAAAAATTC TERM 3863 2736174 - 2736230 + F 100 -24.1 -3.06133 | opp_overlap 2736174 2736179 2736185, overlap 2736176 2736179 2736185 TTATGTCTAAACGCA CATAATCCAAACCCTTCATCAACAGGT AAA ATCTGCTGGCGAAGGGTTTGGATTATG TTACATAAAAAATTC TERM 3864 2736176 - 2736228 + F 100 -20.9 -3.08798 | opp_overlap 2736174 2736179 2736185, overlap 2736174 2736179 2736185 ATGTCTAAACGCACA TAATCCAAACCCTTCATCAACAGGT AAA ATCTGCTGGCGAAGGGTTTGGATTA TGTTACATAAAAAAT TERM 3865 2736225 - 2736179 - f 100 -18.2 -3.57797 | opp_overlap 2736176 2736174 2736179 2736185, overlap 2736174 2736185 TCTAAACGCACATAA TCCAAACCCTTCATCAACAGGT AAA ATCTGCTGGCGAAGGGTTTGGA TTATGTTACATAAAA TERM 3866 2736179 - 2736225 + F 100 -18.2 -3.68988 | opp_overlap 2736179 2736174 2736185, overlap 2736176 2736174 2736185 TCTAAACGCACATAA TCCAAACCCTTCATCAACAGGT AAA ATCTGCTGGCGAAGGGTTTGGA TTATGTTACATAAAA TERM 3867 2736185 - 2736219 + F 84 -10 -3.85509 | opp_overlap 2736179 2736174 2736185, overlap 2736179 2736176 2736174 CGCACATAATCCAAA CCCTTCATCAACAGGT AAA ATCTGCTGGCGAAGGG TTTGGATTATGTTAC TERM 3868 2736219 - 2736185 - f 84 -10 -3.83323 | opp_overlap 2736185 2736179 2736176 2736174, overlap 2736179 2736174 CGCACATAATCCAAA CCCTTCATCAACAGGT AAA ATCTGCTGGCGAAGGG TTTGGATTATGTTAC Dhaf_2532 2736309 - 2737214 + | phenazine biosynthesis protein PhzF family TERM 3869 2737552 - 2737539 - g 90 -8.1 -5.01811 | TGAGGAAATCAAAAA GGCCT ATCG AGGCC TGACCAAAAAATATC TERM 3870 2737591 - 2737564 - g 88 -7 -5.14563 | overlap 2737566 2737569 GGCCTGACCAAAAAA TATCACCCGGAC ATTA ATCCGGGCAACA AGGAAGCTGAGGAAA TERM 3871 2737589 - 2737566 - g 73 -7.4 -4.20707 | overlap 2737564 2737569 CCTGACCAAAAAATA TCACCCGGAC ATTA ATCCGGGCAA CAAGGAAGCTGAGGA TERM 3872 2737859 - 2737840 - g 90 -9.2 -4.56597 | overlap 2737842 TTCTTTGGTCAAAAA GGTCCCCG CACC CGGGGAGC ACGTTCCCAATTTGC Dhaf_2533 2737471 - 2738394 + | chaperone DnaJ domain protein Dhaf_2534 2740123 - 2738399 - | hypothetical protein TERM 3873 2738518 - 2738530 + g 100 -9.1 -5.96219 | GAGGCACCTTTTTCA GGAGG AGG CCTCC TTTTTTTTCTGCCTC TERM 3874 2739808 - 2739833 + g 85 -6.1 -5.08824 | opp_overlap 2739808 AGGAAGCACAGAGCA GGGCAAGCC CCAAAGCA GGATTGCCC TTTTTTCCCTGGCGC Dhaf_2535 2740294 - 2741241 + | glycosyl transferase family 2 TERM 3875 2741247 - 2741234 - f 82 -6.7 -4.84359 | opp_overlap 2741233 2741234, overlap 2741243 CGATCCGCAGAAAAA TCCAG TAAA CTGGA ATTTCCGGACTGAGG Dhaf_2536 2741322 - 2741636 + | hypothetical protein TERM 3876 2741694 - 2741655 - T 73 -2.9 -5.17054 | gap 1, opp_overlap 2741687, overlap 2741673 AGAAGATTTAAAAAA GCACCGATGAGTTCAAAA GCTGT TCATGAACTG-CCGGTGC TGCTTTTGCTGTTAT Dhaf_2537 2742328 - 2741717 - | putative transcriptional regulator, TetR family TERM 3877 2741934 - 2741951 + g 71 -6.3 -4.14541 | opp_overlap 2741934 2741933 2741930 ATTTGAAAAAGCAAG GCTTTCG TGGG TGAAAGC TTTATGTAGTTAGTC Dhaf_2538 2742599 - 2744389 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 3878 2744438 - 2744406 - f 91 -10.5 -4.20834 | opp_overlap 2744411, overlap 2744401 CTTAAAATAATCAAA GGGATGAGGGCCAAA GCT TCCGGCCCTCTTTCC TGACTCGACTTTATC TERM 3879 2744411 - 2744433 + F 72 -7.7 -3.76402 | opp_overlap 2744406 2744401 AATAATCAAAGGGAT GAGGGCC AAAGCTTCC GGCCCTC TTTCCTGACTCGACT Dhaf_2539 2744472 - 2745398 + | hypothetical protein Dhaf_2540 2745459 - 2746043 + | hypothetical protein TERM 3880 2746059 - 2746099 + T 100 -11.4 -5.4182 | gap 2, opp_overlap 2746059 TATATATGGGCAAAA CAGAGTCAGGACTATCTCCA AAA TGGAGAT-G-CCTCACTCTG TTTTTGTTTCTCATT TERM 3881 2746099 - 2746059 - T 100 -11.4 -4.13728 | gap 2, opp_overlap 2746059 TATATATGGGCAAAA CAGAGTCAGGACTATCTCCA AAA TGGAGAT-G-CCTCACTCTG TTTTTGTTTCTCATT Dhaf_2541 2746534 - 2746160 - | hypothetical protein TERM 3882 2746942 - 2746924 - g 71 -3 -4.90217 | opp_overlap 2746927, overlap 2746927 CAAATACAGGAAAAA GTACAGGC TTT GCCTCTTC CATACCAGCATGCTC Dhaf_2542 2746738 - 2747724 + | adenylate cyclase TERM 3883 2748043 - 2748026 - g 72 -11.3 -2.63112 | AAATTTTCCAGATCA CCTGGTC TCCC GACCAGG AGCAAGTGCTCTATA TERM 3884 2748247 - 2748231 - g 70 -9.5 -3.20435 | TGAAGGAGCCATCAA CAGCATT GTC AATGCTG AGACCTTGCAGGAAA Dhaf_2543 2747803 - 2748981 + | hypothetical protein TERM 3885 2749039 - 2749056 + F 100 -9.1 -5.06016 | GGATTACGCTACCGA CCTGGCT GAAC GGCCAGG TTTTCTTTATGTCAT Dhaf_2544 2749120 - 2749767 + | metal dependent phophohydrolase TERM 3886 2749897 - 2749884 - g 70 -2.4 -4.84527 | overlap 2749891 GGCATAGATGAAAAA GTCA ACACCA TGAC AGCCTCCTGGGGCGG TERM 3887 2750047 - 2750037 - g 79 -3.2 -5.24129 | opp_overlap 2750019 GGCTCTTACAAAAAA CAGC TGG GCTA TTTGGGACGTGTATC Dhaf_2545 2749782 - 2750294 + | hypothetical protein Dhaf_2546 2750391 - 2751593 + | protein of unknown function UPF0027 TERM 3888 2751637 - 2751671 + F 100 -14.4 -4.74801 | opp_overlap 2751632 2751637 GCCATGAAAAGTTAA GCCATGATTGGGAGAA CTA TCCTTCCGATCATGGC TTTTTACTACCGTTC TERM 3889 2751671 - 2751637 - f 89 -12.2 -3.39521 | opp_overlap 2751637, overlap 2751632 GCCATGAAAAGTTAA GCCATGATTGGGAGAA CTA TCCTTCCGATCATGGC TTTTTACTACCGTTC TERM 3890 2751789 - 2751748 - f 100 -14.9 -3.61239 | overlap 2751750 GACATCGAGAGAGAA TAGTGTATTATTGTATTAA GAAC TTAATACAATAATACACTG AGACAAGAGGTGAGA TERM 3891 2751787 - 2751750 - f 100 -17.5 -3.37912 | overlap 2751748 CATCGAGAGAGAATA GTGTATTATTGTATTAA GAAC TTAATACAATAATACAC TGAGACAAGAGGTGA Dhaf_2547 2751807 - 2752178 + | transcriptional regulator, GntR family TERM 3892 2752798 - 2752781 - g 73 -9.9 -3.39895 | GTCTTTATCAATCAA GGTCAAG TTGT CTTGACC TCCACAGTGGATGAA Dhaf_2548 2752175 - 2752873 + | ABC transporter related TERM 3893 2753360 - 2753371 + G 72 -5.8 -4.33274 | GCATCTTCCTCATTC TGGC ATCG GCCA TTTTAATCCTCTACG Dhaf_2549 2752867 - 2753664 + | ABC transporter permease protein TERM 3894 2753943 - 2753965 + F 100 -10.7 -5.04868 | opp_overlap 2753947 GCACTTGTGCTTTAA CCCATTTTC TTAGC GAAAATGGG TTTTGTTTGCTTTAA TERM 3895 2754204 - 2754227 + F 100 -15.4 -4.44667 | opp_overlap 2754202 TTGTTCAAGGTAAGT TCTCCCTGCA TCAT TGCAGGGAGA TTTATTATTGGGGAG Dhaf_2550 2754341 - 2755912 + | extracellular solute-binding protein family 5 TERM 3896 2756328 - 2756342 + G 71 -2.8 -4.99568 | overlap 2756318 GGGAAGTGGATTGAC CGCTTT ATT AAAACG TTTTGTTTGATATTG TERM 3897 2756628 - 2756608 - g 72 -11.1 -2.71712 | opp_overlap 2756606, overlap 2756607 TCCTTTTTGCTAAAG CCCGGGG GGAAAAA CCCCGGG AGATTATTCGGCGTC Dhaf_2551 2755914 - 2756909 + | binding-protein-dependent transport systems inner membrane component Dhaf_2552 2756906 - 2757721 + | binding-protein-dependent transport systems inner membrane component TERM 3898 2757981 - 2757966 - g 78 -9 -4.08064 | overlap 2757977 AAGTTGGTGGTAAAA TGGCCT ATAA AGGCCA AGAGCTGACCCCTGA Dhaf_2553 2757734 - 2758609 + | ABC transporter related Dhaf_2554 2758593 - 2759231 + | ABC transporter related TERM 3899 2759233 - 2759281 + F 78 -9.2 -3.72695 | opp_overlap 2759233 CGGAAGATTTATGAA TAAAAAAACCGAGGCACATT AATATGTAC ATTGTGTCTTGGTTTTTTTA TTTCATAGCCCCCCT Dhaf_2555 2759256 - 2759420 + | hypothetical protein Dhaf_2556 2759966 - 2759376 - | hypothetical protein TERM 3900 2759953 - 2759943 - G 74 -6.8 -4.41177 | overlap 2759945 GATATAAAGCCAAAA GACC AAA GGTC GGGTTCTTTTCATAA TERM 3901 2760052 - 2760071 + H 91 -7.2 -5.26119 | gap 1, opp_overlap 2760052 AATTCTCGAATTGAA GCAGGAGAC CTT GT-TCCTGC TTTTCTTTTTGAGAA Dhaf_2557 2760196 - 2760975 + | ABC transporter related TERM 3902 2761577 - 2761563 - g 76 -10 -3.74693 | opp_overlap 2761544, overlap 2761566 CCCCATCGCAGCAAA GAAGCC GTA GGCTTC ATCGGAGCCTTGGCG Dhaf_2558 2760972 - 2762894 + | hypothetical protein Dhaf_2559 2762919 - 2763287 + | YdfQ Dhaf_2560 2763395 - 2763601 + | twin-arginine translocation protein, TatA/E family subunit TERM 3903 2763612 - 2763666 + F 73 -7.5 -4.13368 | opp_overlap 2763619, overlap 2763619 AGTAAAAGATAGAAG GATAA-AAGAGACGTTTTGACTCCTCC AGG GGAC-AGCCAAAACGTCTCTTCTTATG TTTCCTATTTTCTTG TERM 3904 2763619 - 2763658 + F 100 -11.6 -4.05193 | gap 1, opp_overlap 2763619, overlap 2763612 GATAGAAGGATAAAA GAGACGTTTTGACTCCTCC AGG GGAC-AGCCAAAACGTCTC TTCTTATGTTTCCTA TERM 3905 2763658 - 2763619 - f 100 -13.8 -4.60073 | gap 1, opp_overlap 2763619 2763612 GATAGAAGGATAAAA GAGACGTTTTGACTCCTCC AGG GGAC-AGCCAAAACGTCTC TTCTTATGTTTCCTA TERM 3906 2764520 - 2764550 + G 84 -13.3 -2.52896 | opp_overlap 2764537 AGCCCTCCCTGGTCA TCCCCAGTCATGG CAAAC CCATGGCAGGGGA TGAATTAAGCCATCA Dhaf_2561 2763805 - 2764632 + | beta-lactamase domain protein Dhaf_2562 2764739 - 2765344 + | hypothetical protein TERM 3907 2765403 - 2765351 - f 100 -38.8 -4.52857 | gap 1, overlap 2765353 AGCCTCTAGATAAAA GACCTGAAGGGTGCCGCGGGCTGCT AAGA AGCAGCCCGCGGCACCCTTCAGG-C TTGCACGGAGAGATA TERM 3908 2765402 - 2765353 - f 100 -42.5 -3.87627 | overlap 2765351 CCTCTAGATAAAAGA CCTGAAGGGTGCCGCGGGCTGCT AAGA AGCAGCCCGCGGCACCCTTCAGG CTTGCACGGAGAGAT TERM 3909 2765441 - 2765429 - f 80 -3.5 -5.35459 | opp_overlap 2765429 AGATATCAGAAAAAA TAATA TTT TATTA ATATTTAGCAATAAA Dhaf_2563 2765702 - 2768086 + | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family Dhaf_2564 2768099 - 2768671 + | dimethylsulfoxide reductase, chain B TERM 3910 2769201 - 2769180 - g 70 -2.1 -4.85599 | opp_overlap 2769185 2769186, overlap 2769184 TCCAGCGGACAAAAA GGCAGGGAA AAGC TCCCCAGGC TTGAGCTTTTCGTTC TERM 3911 2769286 - 2769316 + G 75 -11.8 -2.71364 | GGGCAATGGCAGGGG CCGGCCAGGAAAGT GCC GCCTTGCTGGCCGG TGGTTACAGCGCTGC Dhaf_2565 2768688 - 2769515 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 3912 2769576 - 2769535 - T 100 -19.1 -4.2828 | opp_overlap 2769537 2769541, overlap 2769537 2769541 CCGGATTGATTAAAA TACAAAGGCTTAGAAATGA TTGT TCATTTCTAAGCCTTTGTC ATGTGGAATCCTTCT TERM 3913 2769537 - 2769574 + T 100 -21.7 -2.64091 | opp_overlap 2769535 2769537 2769541, overlap 2769541 GGATTGATTAAAATA CAAAGGCTTAGAAATGA TTGT TCATTTCTAAGCCTTTG TCATGTGGAATCCTT TERM 3914 2769574 - 2769537 - T 100 -21.7 -3.745 | opp_overlap 2769537 2769541, overlap 2769535 2769541 GGATTGATTAAAATA CAAAGGCTTAGAAATGA TTGT TCATTTCTAAGCCTTTG TCATGTGGAATCCTT TERM 3915 2769570 - 2769541 - T 100 -16.7 -4.48449 | opp_overlap 2769537 2769541, overlap 2769537 2769535 TGATTAAAATACAAA GGCTTAGAAATGA TTGT TCATTTCTAAGCC TTTGTCATGTGGAAT TERM 3916 2769541 - 2769570 + T 100 -16.7 -4.01888 | opp_overlap 2769541 2769537 2769535, overlap 2769537 TGATTAAAATACAAA GGCTTAGAAATGA TTGT TCATTTCTAAGCC TTTGTCATGTGGAAT Dhaf_2566 2769781 - 2769596 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2567 2769974 - 2770594 + | cobalamin B12-binding domain protein TERM 3917 2770973 - 2770960 - g 70 -8.1 -3.91798 | opp_overlap 2770962 CAATTTCCAATGAAA CTGCC CGCT GGCAG GCTGTATTGCCCCTG Dhaf_2568 2770653 - 2771456 + | dihydropteroate synthase DHPS TERM 3918 2771701 - 2771687 - g 73 -5.6 -4.61527 | AAAACTGTGGAAAAA GTCGGC GGG GCGGAC GGTGTCGATTATGGA Dhaf_2569 2771495 - 2772610 + | Uroporphyrinogen decarboxylase (URO-D) TERM 3919 2772664 - 2772611 - f 77 -8.3 -3.94 | opp_overlap 2772620 2772623 2772625 2772627 2772631, overlap 2772623 2772631 GTAACCTCTAAATAA TTGATGATACAATAGACAAAGGCAG ACTG CTGCCTTTGTCTATCATTACCTAAA GGGAGAAGGCTGTTA TERM 3920 2772620 - 2772655 + F 86 -12 -3.05384 | opp_overlap 2772611 2772623 2772631, overlap 2772623 2772625 2772627 2772631 AAATAATTGATGATA CAATAGACAAAGGCAG ACTG CTGCCTTTGTCTATCA TTACCTAAAGGGAGA TERM 3921 2772623 - 2772652 + F 100 -18.1 -2.75064 | opp_overlap 2772623 2772611 2772631, overlap 2772620 2772625 2772627 2772631 TAATTGATGATACAA TAGACAAAGGCAG ACTG CTGCCTTTGTCTA TCATTACCTAAAGGG TERM 3922 2772652 - 2772623 - f 100 -18.1 -3.56161 | opp_overlap 2772620 2772623 2772625 2772627 2772631, overlap 2772611 2772631 TAATTGATGATACAA TAGACAAAGGCAG ACTG CTGCCTTTGTCTA TCATTACCTAAAGGG TERM 3923 2772625 - 2772650 + F 100 -16.3 -2.92192 | opp_overlap 2772623 2772611 2772631, overlap 2772623 2772620 2772627 2772631 ATTGATGATACAATA GACAAAGGCAG ACTG CTGCCTTTGTC TATCATTACCTAAAG TERM 3924 2772627 - 2772648 + F 95 -13.1 -3.0127 | opp_overlap 2772623 2772611 2772631, overlap 2772625 2772623 2772620 2772631 TGATGATACAATAGA CAAAGGCAG ACTG CTGCCTTTG TCTATCATTACCTAA TERM 3925 2772644 - 2772631 - f 79 -8.1 -4.26393 | opp_overlap 2772631 2772627 2772625 2772623 2772620, overlap 2772623 2772611 GATACAATAGACAAA GGCAG ACTG CTGCC TTTGTCTATCATTAC TERM 3926 2772631 - 2772644 + F 76 -8.1 -4.17417 | opp_overlap 2772623 2772611 2772631, overlap 2772627 2772625 2772623 2772620 GATACAATAGACAAA GGCAG ACTG CTGCC TTTGTCTATCATTAC Dhaf_2570 2772679 - 2773404 + | transcriptional regulator, GntR family TERM 3927 2773380 - 2773391 + F 78 -2.2 -5.47218 | ATATCATCTGATCGC TTCC ACAC GGAG TTTTTTTGGCTAAGA Dhaf_2571 2773432 - 2774088 + | cobalamin B12-binding domain protein TERM 3928 2774520 - 2774510 - g 80 -8.2 -4.42238 | opp_overlap 2774510 CTATGGCAAGGAAAA GGCG GAG CGCC TGTTCAGACAAATCC Dhaf_2572 2774100 - 2774798 + | Protein of unknown function DUF1638 TERM 3929 2775800 - 2775819 + G 76 -9.3 -3.7941 | ACTTTCCCTGGATAT TCACCCG GGGGGA CGGGTGA TTCTTATCCCCAATA Dhaf_2573 2774835 - 2776682 + | ferredoxin TERM 3930 2777125 - 2777147 + G 85 -7.1 -4.87665 | gap 1 CGGGCTTGTTGAAGG TCAGAT-CGC TAAG GCGGATCTGA TTTTTCTCAATAAGA Dhaf_2574 2776679 - 2777305 + | cobalamin synthesis protein P47K Dhaf_2575 2777298 - 2777786 + | hypothetical protein Dhaf_2576 2777910 - 2778779 + | short-chain dehydrogenase/reductase SDR TERM 3931 2778833 - 2778856 + T 100 -11.8 -5.38549 | GGGAGAAGTCTTCGA CACTCTTCGT CTTT ACGAAGGGTG TTTTTGTTATTTACA Dhaf_2577 2779576 - 2778905 - | protein of unknown function DUF218 TERM 3932 2779692 - 2779703 + H 71 -4.4 -4.76644 | overlap 2779686 GATAGCACATGGAGT GTTG CGCT CAAC TTTTTGATAGGTCTT TERM 3933 2780049 - 2780063 + G 71 -7.1 -4.05714 | opp_overlap 2780049 GGCATGGTCGTCAAA GCGGA TATTT TCCGC TTTATGATTCAGCCT Dhaf_2578 2779899 - 2780273 + | putative signal transduction protein with CBS domains Dhaf_2579 2781318 - 2780281 - | hypothetical protein TERM 3934 2781472 - 2781506 + H 100 -13.1 -3.72893 | gap 1, overlap 2781475 TGAATCGTTGTATTG GAACCGTTTACAAGTC TCCG GGC-TGTAAACGGTTC TTTGCTGAGGGAATA TERM 3935 2781475 - 2781503 + H 80 -9 -4.00042 | gap 1, overlap 2781472 ATCGTTGTATTGGAA CCGTTTACAAGTC TCCG GGC-TGTAAACGG TTCTTTGCTGAGGGA TERM 3936 2781617 - 2781636 + H 83 -9.3 -4.05788 | opp_overlap 2781616 2781615 ATGTTTTTAATAACT GCCGGTT TTCGAC AACCGGC TTTGGTTTGAGGAGG TERM 3937 2782062 - 2782049 - g 82 -5.3 -5.01732 | AAGGCTTTGAAAAAA GGAAT ATTG ATTCC TTAAGCGGCGGACAA Dhaf_2580 2781658 - 2782704 + | spermidine/putrescine ABC transporter ATPase subunit TERM 3938 2783215 - 2783197 - g 85 -5.3 -5.24129 | CCGTCTTACAAAAAA TCGACCA CTCTC TGATCGA AGCGGCGGAGGACTT Dhaf_2581 2782701 - 2783525 + | binding-protein-dependent transport systems inner membrane component Dhaf_2582 2783522 - 2784313 + | Ornithine carbamoyltransferase TERM 3939 2784877 - 2784853 - g 71 -2.7 -5.00616 | opp_overlap 2784838, overlap 2784855 GTGGCCTTGAAAAAA CTGGGCTACTC TTT GAACAGCCGGG ATGAAAAAGAGCTGG Dhaf_2583 2784310 - 2785359 + | extracellular solute-binding protein family 1 TERM 3940 2785445 - 2785425 - g 100 -11.9 -5.61881 | CCGTAAAAAGAAAAA TGCTCAACC GGA GGTCGAGCA GCCAAAACTCATGAT Dhaf_2584 2785381 - 2785629 + | hypothetical protein TERM 3941 2785654 - 2785673 + F 100 -12.2 -3.9281 | opp_overlap 2785654 ATGGCCTATGTCAAA GGACACCT ACCC AGGTGTCC TTATTTCACGATCAT TERM 3942 2785673 - 2785654 - f 93 -12.2 -3.60098 | opp_overlap 2785654 ATGGCCTATGTCAAA GGACACCT ACCC AGGTGTCC TTATTTCACGATCAT TERM 3943 2785726 - 2785742 + F 71 -2.3 -5.24129 | overlap 2785729 CTACGCCGATGGAAA CTGTAAT ATT ATTATGG TTTTTTATGCCAAAC Dhaf_2585 2785821 - 2786183 + | protein of unknown function DUF307 Dhaf_2586 2786268 - 2786456 + | hypothetical protein Dhaf_2587 2786554 - 2787660 + | aldo/keto reductase TERM 3944 2787915 - 2787895 - g 82 -11.9 -3.34013 | GACTCTGTCAATGAA TTCCTGGAC CTT GCCCAGGAA GCTGATGGTTTTATT Dhaf_2588 2787694 - 2788326 + | NADPH-dependent FMN reductase TERM 3945 2788364 - 2788395 + F 100 -16.8 -3.85698 | opp_overlap 2788368, overlap 2788368 GGCATGATATTGACA GAAAGCATATGGTC ATTG GGCCATATGCTTTC TTTATGAAAAAAGGA TERM 3946 2788391 - 2788368 - f 85 -9.6 -4.07868 | opp_overlap 2788368 2788364 TGATATTGACAGAAA GCATATGGTC ATTG GGCCATATGC TTTCTTTATGAAAAA TERM 3947 2788368 - 2788391 + F 100 -11.8 -4.55295 | opp_overlap 2788368, overlap 2788364 TGATATTGACAGAAA GCATATGGTC ATTG GGCCATATGC TTTCTTTATGAAAAA Dhaf_2589 2788500 - 2789240 + | protein of unknown function DUF1287 Dhaf_2590 2789335 - 2790198 + | nitroreductase TERM 3948 2790225 - 2790254 + F 100 -6.6 -5.69262 | opp_overlap 2790225 GAGCACATTGGAAAA CACCTTATTG AAGGCAATGG CAATAAGGTG TTTTTATTTTTATAA TERM 3949 2790254 - 2790225 - f 71 -6.6 -4.17657 | opp_overlap 2790225 GAGCACATTGGAAAA CACCTTATTG AAGGCAATGG CAATAAGGTG TTTTTATTTTTATAA Dhaf_2591 2790355 - 2790852 + | putative transcriptional regulator TERM 3950 2791546 - 2791562 + G 81 -7.9 -4.48987 | AATCCTCTGTTTACC GCTGTGG TGG CCACCGC TTTTGCTTATGAAGG TERM 3951 2791936 - 2791917 - g 81 -5.8 -4.89852 | CCATATCTATAAAAA TATTGATG CCAA CACCAATA TGCCCACCAACTCCG Dhaf_2592 2790937 - 2792295 + | amino acid permease-associated region TERM 3952 2792388 - 2792347 - T 86 -10.1 -3.9392 | opp_overlap 2792351, overlap 2792351 TGGGAGCCCAAATAA TTAAGCCAGGAGCTTGTCC TAGC GGAACAGCTCCTGGCTTTT AGCAATTTAAATGGT TERM 3953 2792351 - 2792384 + T 100 -15.3 -4.17089 | opp_overlap 2792347 2792351 AGCCCAAATAATTAA GCCAGGAGCTTGTCC TAGC GGAACAGCTCCTGGC TTTTAGCAATTTAAA TERM 3954 2792384 - 2792351 - T 100 -15.3 -3.62054 | opp_overlap 2792351, overlap 2792347 AGCCCAAATAATTAA GCCAGGAGCTTGTCC TAGC GGAACAGCTCCTGGC TTTTAGCAATTTAAA Dhaf_2593 2793841 - 2792411 - | NLP/P60 protein TERM 3955 2792852 - 2792878 + g 75 -3.7 -5.09895 | opp_overlap 2792848, overlap 2792853 GACTTCATCAACGGG TTTCTCGACGA TCTTC TCATCGAGAAC TTTTTTGGCTACCTC TERM 3956 2793755 - 2793770 + g 74 -2.6 -5.16472 | gap 1, overlap 2793758 GCCAAGAACACGAGG CGATTTC CAA GAAA-CG TTTTTTGCAATTTTT TERM 3957 2794240 - 2794209 - gH 100 -9.4 -6.15536 | opp_overlap 2794211 2794212, overlap 2794211 2794212 AAGCAACAAAAAAAA TATCTCCTGAACCG GAAG CGGCTCAGGAGGTT TGGCAAAGGAAGAAA TERM 3958 2794211 - 2794238 + GH 91 -12 -3.53012 | opp_overlap 2794209 2794211 2794212, overlap 2794212 GCAACAAAAAAAATA TCTCCTGAACCG GAAG CGGCTCAGGAGG TTTGGCAAAGGAAGA TERM 3959 2794238 - 2794211 - gH 100 -12 -4.69435 | opp_overlap 2794211 2794212, overlap 2794209 2794212 GCAACAAAAAAAATA TCTCCTGAACCG GAAG CGGCTCAGGAGG TTTGGCAAAGGAAGA TERM 3960 2794237 - 2794212 - gH 100 -15.5 -3.39221 | opp_overlap 2794212 2794211, overlap 2794211 2794209 CAACAAAAAAAATAT CTCCTGAACCG GAAG CGGCTCAGGAG GTTTGGCAAAGGAAG TERM 3961 2794212 - 2794237 + GH 93 -13.3 -2.71712 | opp_overlap 2794211 2794209 2794212, overlap 2794211 CAACAAAAAAAATAT CTCCTGAACCG GAAG CGGCTCAGGAG GTTTGGCAAAGGAAG Dhaf_2594 2794154 - 2795089 + | NERD domain protein Dhaf_2595 2795040 - 2795438 + | protein of unknown function UPF0047 TERM 3962 2795840 - 2795826 - g 83 -7 -4.71426 | opp_overlap 2795826 2795824 TGCTCAGCAATAAAA GGGACC GCC GGACCC TCATTGTTTTTAGTA TERM 3963 2796007 - 2796037 + G 75 -3.2 -5.06414 | CACGAAGACAGAAGG GGTGGCGATTGC TTTAGCT GTAACCGGCACC TTTTTATTGGCCACC Dhaf_2596 2795567 - 2796511 + | protein of unknown function DUF6 transmembrane Dhaf_2597 2797153 - 2796500 - | Superoxide dismutase TERM 3964 2796848 - 2796870 + g 84 -12.6 -3.14132 | ATGGGTGAGGGTATG GGGGCCGGGG GTA CCCTGGCCCA TTCCTGAGGGGGCCA TERM 3965 2798844 - 2798863 + H 100 -10 -5.48063 | opp_overlap 2798844 2798840 CATAGTTAAAACGAA CCGTACTG ATGC CAGTGCGG TTTTTTGTATTAAGT TERM 3966 2798863 - 2798844 - H 70 -7.8 -3.70676 | opp_overlap 2798844, overlap 2798840 CATAGTTAAAACGAA CCGTACTG ATGC CAGTGCGG TTTTTTGTATTAAGT TERM 3967 2799117 - 2799100 - g 73 -8.5 -3.80573 | GCTATTATGATGAAA CAGGTTT GCTA AAACCTG CGGAAATTGATAAAT Dhaf_2598 2799030 - 2799845 + | transcriptional regulator, MerR family TERM 3968 2799852 - 2799877 + F 100 -7.6 -5.27779 | opp_overlap 2799852 2799847 AAAATATAGATAAAA GCGTTTTGCA TTTTGT TGCAAGGCGC TTTTTTACTATTGAC TERM 3969 2800031 - 2800048 + G 74 -9.9 -3.55622 | GTTTATCAAACTTGA GCAGGAA TATA TTCCTGC TTTGCAAGCGTTAAA Dhaf_2599 2799960 - 2800436 + | protein of unknown function UPF0066 TERM 3970 2802018 - 2801991 - T 71 -7 -4.2349 | opp_overlap 2801995, overlap 2801995 GCTCCATAGTTAAAA CGAACCGTACTG ATGC CAGTACGGTTTT TTGCTGCTTATTTTC TERM 3971 2801995 - 2802014 + T 100 -12.2 -5.22794 | opp_overlap 2801995 2801991 CATAGTTAAAACGAA CCGTACTG ATGC CAGTACGG TTTTTTGCTGCTTAT TERM 3972 2802014 - 2801995 - T 93 -12.2 -3.70676 | opp_overlap 2801995, overlap 2801991 CATAGTTAAAACGAA CCGTACTG ATGC CAGTACGG TTTTTTGCTGCTTAT Dhaf_2600 2802447 - 2802055 - | CoA-binding domain protein TERM 3973 2802860 - 2802883 + H 100 -9.6 -5.06414 | opp_overlap 2802863, overlap 2802863 CTGATACAGGATAGC AAACCCTTCC GTAA GGAAGGGTTA TTTTTCTTGCGGCGA TERM 3974 2802880 - 2802863 - H 95 -11.3 -3.88062 | opp_overlap 2802860 2802863 ATACAGGATAGCAAA CCCTTCC GTAA GGAAGGG TTATTTTTCTTGCGG TERM 3975 2802863 - 2802880 + H 100 -11.3 -4.63592 | opp_overlap 2802863, overlap 2802860 ATACAGGATAGCAAA CCCTTCC GTAA GGAAGGG TTATTTTTCTTGCGG Dhaf_2601 2802975 - 2803715 + | cobalamin biosynthesis protein CbiM Dhaf_2602 2803718 - 2804029 + | cobalt transport protein Dhaf_2603 2804108 - 2804878 + | cobalt ABC transporter, inner membrane subunit CbiQ TERM 3976 2805095 - 2805112 + G 74 -2.7 -5.03314 | gap 1, opp_overlap 2805095 2805096, overlap 2805096 AACGGAATTCTGAAA C-CCTCTT CAG GAGAGGTG TTTTTTGGCGGTCAG TERM 3977 2805096 - 2805110 + G 71 -6.4 -4.14633 | opp_overlap 2805095 2805096, overlap 2805095 ACGGAATTCTGAAAC CCTCTT CAG GAGAGG TGTTTTTTGGCGGTC Dhaf_2604 2804909 - 2805775 + | cobalt ABC transporter, ATPase subunit TERM 3978 2805928 - 2805905 - T 78 -9.6 -3.61468 | opp_overlap 2805907, overlap 2805901 2805907 CTCCAATGAAAGTAA GACGCTGCAA GAGA TTGCAGCGTT TTTTCTTTTTGTTTT TERM 3979 2805926 - 2805907 - T 89 -12.2 -3.38036 | opp_overlap 2805907, overlap 2805905 2805901 CCAATGAAAGTAAGA CGCTGCAA GAGA TTGCAGCG TTTTTTCTTTTTGTT TERM 3980 2805907 - 2805926 + T 100 -12.2 -6.01725 | opp_overlap 2805907 2805905 2805901 CCAATGAAAGTAAGA CGCTGCAA GAGA TTGCAGCG TTTTTTCTTTTTGTT TERM 3981 2806032 - 2806056 + T 71 -10.1 -2.62396 | opp_overlap 2806033 AGAAGCCAAATTAAA ATTAGGGTACA ATT TGTACCCTAAC TGCTATGACCGCATC TERM 3982 2806055 - 2806033 - T 100 -13.6 -4.5852 | opp_overlap 2806032 GAAGCCAAATTAAAA TTAGGGTACA ATT TGTACCCTAA CTGCTATGACCGCAT Dhaf_2605 2806431 - 2806168 - | addiction module toxin, Txe/YoeB family Dhaf_2606 2806693 - 2806424 - | addiction module antitoxin, RelB/DinJ family Dhaf_2608 2808108 - 2807194 - | hypothetical protein Dhaf_2609 2808848 - 2808105 - | ABC transporter related Dhaf_2610 2809549 - 2808845 - | cobalamin synthesis protein P47K Dhaf_2611 2809726 - 2810397 + | cyclic nucleotide-binding protein TERM 3983 2811092 - 2811070 - g 85 -7.6 -4.8048 | TGCCCAGACCAAAAA CCAGGGGATC CGG GTTGCCCTGG ATCTGACTAAAGAGT Dhaf_2612 2810420 - 2811463 + | hypothetical protein TERM 3984 2811543 - 2811579 + G 76 -8.7 -4.08216 | opp_overlap 2811554, overlap 2811549 GCCGGCAGCATGGCT CTGGGACAGGAGATACT GCT GGTATCCCCTGTTTCCG TTTTGCAGCGGCTGG TERM 3985 2811549 - 2811573 + G 76 -9.3 -3.92659 | opp_overlap 2811554, overlap 2811543 AGCATGGCTCTGGGA CAGGAGATACT GCT GGTATCCCCTG TTTCCGTTTTGCAGC Dhaf_2613 2811441 - 2812217 + | binding-protein-dependent transport systems inner membrane component Dhaf_2614 2812226 - 2812798 + | ABC transporter related TERM 3986 2812952 - 2812900 - f 83 -8.8 -4.23007 | gap 1, opp_overlap 2812900 TATATAAGTTTAAAA TTTGCCTGTTTTGAAATTTATTCAT CTAG ATGAGTCAAT-TCAAAACGGGCAAA TTTTTATCTTCACCT TERM 3987 2812900 - 2812952 + F 100 -13.2 -5.09762 | gap 1, opp_overlap 2812900 TATATAAGTTTAAAA TTTGCCTGTTTTGAAATTTATTCAT CTAG ATGAGTCAATT-CAAAACGGGCAAA TTTTTATCTTCACCT Dhaf_2615 2813040 - 2813240 + | hypothetical protein Dhaf_2616 2813336 - 2813986 + | SNARE associated Golgi protein TERM 3988 2814186 - 2814169 - g 72 -5.7 -4.45168 | opp_overlap 2814169 CGGGGAAAAGAGAAA TCTTTTT TTTA AAAAAGA TATTGAGGCTTTATT TERM 3989 2814706 - 2814720 + G 71 -4.2 -4.71426 | TGTGAAAGATAGCGT GGATCA TCT TGAACC TTTTCTTCATGAAAA Dhaf_2617 2814044 - 2816065 + | N-6 DNA methylase TERM 3990 2816209 - 2816174 - f 100 -12.2 -4.4836 | opp_overlap 2816185, overlap 2816175 2816185 GAATAAAATCGAAAA TCACAAAAAAATTAGT CCTG ACTAATTTTTTTGTGT CGAATCGTGTGCTAA TERM 3991 2816208 - 2816175 - f 100 -15.7 -3.27389 | opp_overlap 2816185, overlap 2816174 2816185 AATAAAATCGAAAAT CACAAAAAAATTAGT CCTG ACTAATTTTTTTGTG TCGAATCGTGTGCTA TERM 3992 2816185 - 2816198 + F 89 -3.9 -5.71712 | opp_overlap 2816185 2816175 2816174 AAAATCACAAAAAAA TTAGT CCTG ACTAA TTTTTTTGTGTCGAA TERM 3993 2816198 - 2816185 - f 91 -3.9 -5.77632 | opp_overlap 2816185, overlap 2816175 2816174 AAAATCACAAAAAAA TTAGT CCTG ACTAA TTTTTTTGTGTCGAA TERM 3994 2816599 - 2816622 + G 73 -5.4 -4.57073 | overlap 2816593 GTGAAGTCTGCTTTT TTTCGGAAAG ACAG CTTTTTGAAA TTTTTAAACAAGATG Dhaf_2618 2816292 - 2816978 + | transcriptional regulator, Crp/Fnr family TERM 3995 2817023 - 2817050 + F 90 -7.1 -5.12707 | opp_overlap 2817023 CGATAAGTTAAAAAA GATAATCCTCT GTTGAA GGGGGATTATC TTTTTTGCACTTTCA TERM 3996 2817050 - 2817023 - f 78 -4.2 -5.1925 | opp_overlap 2817023 CGATAAGTTAAAAAA GATAATCCTC TGTTGAAG GGGGATTATC TTTTTTGCACTTTCA TERM 3997 2817162 - 2817184 + F 70 -2.6 -5.04733 | opp_overlap 2817163, overlap 2817163 2817164 TCAGCGAAGCAACAA GTGCGAAAGC AGT GCTTTCGGGG TTTTCTTTATCATTC Dhaf_2619 2817390 - 2817785 + | hypothetical protein TERM 3998 2818207 - 2818220 + G 93 -6.7 -5.41746 | TCGTGGGAGACCCGG GAAGG CGCC CCTTC TTTTTTTCACACCTT TERM 3999 2818263 - 2818281 + G 73 -8.8 -3.86015 | TAATGCCAGTATGCA CTGCGCCA GAA TGGCGGAG TTTGTGAAAAAGCTC Dhaf_2620 2817862 - 2818899 + | reductive dehalogenase Dhaf_2621 2818917 - 2819216 + | hypothetical protein Dhaf_2622 2819285 - 2820250 + | FMN-binding domain protein Dhaf_2623 2820372 - 2820485 + | hypothetical protein TERM 4000 2820531 - 2820517 - f 75 -5.7 -4.62783 | opp_overlap 2820517 TATCGATTGCAAAAA CTCCT GTAAA AGGAG TTTTTTGCCTATGTG TERM 4001 2820517 - 2820531 + F 85 -5.7 -5.14477 | opp_overlap 2820517 TATCGATTGCAAAAA CTCCT GTAAA AGGAG TTTTTTGCCTATGTG Dhaf_2624 2820542 - 2820634 + | hypothetical protein TERM 4002 2821632 - 2821614 - T 71 -6.6 -4.07687 | AGTCTGGTGTGAAAA CCTAGGGC TCA ACCCTGGG ACTGCATCGGAAACT TERM 4003 2823439 - 2823420 - T 70 -7.8 -3.66803 | opp_overlap 2823419 2823418 CGGGAACAGCCCAAA CCAATCCC TTCG GGGGTTGG GGTTGTAGGACCTTC TERM 4004 2823604 - 2823589 - T 74 -10.4 -2.71011 | overlap 2823575 2823576 ACCCCGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTCC TERM 4005 2824480 - 2824458 - T 88 -9.8 -4.15833 | ATGAGTATGCGAAAA GGTGAGTGAG AAT CTCACCCGCC GAAAACCTAAGGATT TERM 4006 2825613 - 2825597 - T 70 -5.1 -4.4715 | opp_overlap 2825602, overlap 2825601 GCTCAACGGATAAAA GCTACCC TGG GGATAAC AGGCTTATCTCCCCC TERM 4007 2826326 - 2826345 + T 95 -7.9 -4.98531 | opp_overlap 2826326 2826328, overlap 2826320 CCAGGTAGTGCAAGA GACCATC GAGTAA GATGGTC TTTTTGCTTTGGGGC TERM 4008 2826364 - 2826381 + T 71 -8.5 -3.53012 | opp_overlap 2826364, overlap 2826374 TTGCTTTGGGGCAAA TTACGCA CCAG TGCGTAA TTTGCCCCAAAGCAA TERM 4009 2826381 - 2826364 - T 71 -8.5 -3.53012 | opp_overlap 2826364 2826374 TTGCTTTGGGGCAAA TTACGCA CCAG TGCGTAA TTTGCCCCAAAGCAA TERM 4010 2826513 - 2826469 - T 100 -26.8 -3.63627 | gap 1, opp_overlap 2826477, overlap 2826472 2826477 TCTGGAGAGTCCAAA CTACCAAAGCCGGCCCTTGAT AGAA ATCAAGGGCCGGCTTTGGT-G CGTAAAACACGATTT TERM 4011 2826511 - 2826472 - T 100 -29.6 -2.93585 | opp_overlap 2826477, overlap 2826469 2826477 GGAGAGTCCAAACTA CCAAAGCCGGCCCTTGAT AGAA ATCAAGGGCCGGCTTTGG TGCGTAAAACACGAT TERM 4012 2826506 - 2826477 - T 100 -22.3 -3.8901 | opp_overlap 2826477, overlap 2826472 2826469 GTCCAAACTACCAAA GCCGGCCCTTGAT AGAA ATCAAGGGCCGGC TTTGGTGCGTAAAAC TERM 4013 2826477 - 2826506 + T 100 -22.3 -3.76224 | opp_overlap 2826477 2826472 2826469 GTCCAAACTACCAAA GCCGGCCCTTGAT AGAA ATCAAGGGCCGGC TTTGGTGCGTAAAAC Dhaf_2625 2827372 - 2826527 - | ketose-bisphosphate aldolase TERM 4014 2826850 - 2826830 - G 71 -8.9 -3.52192 | CGGAAGTTTATACAA GCCATGGGC GGT GCCTACGGC AGGAGCAAAAGCATC TERM 4015 2827471 - 2827496 + H 70 -7.9 -3.64822 | opp_overlap 2827466 2827464 2827471, overlap 2827466 2827465 2827464 CTTGTAAATATGCAA TATTATAATAT TGCA ATATTATAATA TTTGAGTGAGGAAGT Dhaf_2626 2827520 - 2828290 + | transcriptional regulator, GntR family Dhaf_2627 2828725 - 2830029 + | extracellular solute-binding protein family 1 Dhaf_2628 2830215 - 2831552 + | L-fucose isomerase _2 domain protein Dhaf_2629 2831564 - 2832664 + | peptidase M24 TERM 4016 2833489 - 2833511 + G 80 -8.5 -4.4009 | gap 1 GATATTTACGGTTAC CCTGCCAACA AATT TGT-GGCAGG TTTTGTCGGCTCCCC TERM 4017 2833645 - 2833671 + G 75 -5.9 -4.50159 | gap 1 CTCGGGAAATTTGAG GCCTTCCTGG GAGTTCGG CC-GGAAGGC TTTGTTTGGGTTGAC Dhaf_2630 2832817 - 2833935 + | ABC transporter related TERM 4018 2834358 - 2834373 + G 88 -2.4 -5.7827 | overlap 2834344 TCCCTTGGCTTATTC CCGGGG TTAT CGTCGG TTTTTTGTTTATGTT Dhaf_2631 2833979 - 2834896 + | binding-protein-dependent transport systems inner membrane component Dhaf_2632 2834937 - 2835782 + | binding-protein-dependent transport systems inner membrane component Dhaf_2633 2835857 - 2837065 + | phosphofructokinase Dhaf_2634 2837101 - 2838540 + | Aldehyde Dehydrogenase Dhaf_2635 2838588 - 2839517 + | triosephosphate isomerase TERM 4019 2840783 - 2840810 + G 78 -11.4 -2.94218 | opp_overlap 2840785 2840787, overlap 2840785 2840787 GATATCTTGCGGACA GATAGCAGAACA ACAT TGTTCCGCTATC TATATCATAGGCGCT TERM 4020 2840808 - 2840785 - g 71 -10.4 -2.87344 | opp_overlap 2840785 2840783 2840787, overlap 2840787 TATCTTGCGGACAGA TAGCAGAACA ACAT TGTTCCGCTA TCTATATCATAGGCG Dhaf_2636 2839557 - 2841008 + | hypothetical protein Dhaf_2637 2841026 - 2842036 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 4021 2842044 - 2842081 + T 100 -15.7 -4.54821 | opp_overlap 2842048 GTCTCTAATCACGAA TTAAGGGGATTCTTGCC TGAA GGCTGGAATCCCCTTGA TTTTGTGATTAAAAT TERM 4022 2842077 - 2842048 - T 91 -12.1 -3.43151 | opp_overlap 2842044 CTAATCACGAATTAA GGGGATTCTTGCC TGAA GGCTGGAATCCCC TTGATTTTGTGATTA Dhaf_2638 2842938 - 2842090 - | transcriptional regulator, AraC family TERM 4023 2842701 - 2842711 + g 74 -4 -4.87803 | opp_overlap 2842701, overlap 2842696 TATGACAATTGAGAA TGAT TAA ATCA TTTTCTTTGGCAGTA TERM 4024 2842776 - 2842794 + g 80 -3.9 -5.19879 | gap 1, opp_overlap 2842774 2842776 2842777 2842779, overlap 2842777 CCTTTACTACAAACA T-CAGCAG GTAA CTGCTGTA TTTTTCTCTTTCGAC TERM 4025 2842777 - 2842792 + g 80 -9 -4.22132 | opp_overlap 2842776 2842774 2842777 2842779, overlap 2842776 CTTTACTACAAACAT CAGCAG GTAA CTGCTG TATTTTTCTCTTTCG Dhaf_2639 2843162 - 2843977 + | dihydropteroate synthase DHPS Dhaf_2640 2844029 - 2845159 + | Uroporphyrinogen-III decarboxylase-like protein Dhaf_2641 2845209 - 2845841 + | cobalamin B12-binding domain protein TERM 4026 2845963 - 2845926 - f 100 -20.3 -3.56161 | opp_overlap 2845926 TAACGGATGAGAGAA CCCTGAATATAGTAAAT TTTA ATTTACTATATTCAGGG TTTTTACTTGAAATA TERM 4027 2845926 - 2845963 + F 100 -20.3 -4.87291 | opp_overlap 2845926 TAACGGATGAGAGAA CCCTGAATATAGTAAAT TTTA ATTTACTATATTCAGGG TTTTTACTTGAAATA Dhaf_2642 2846026 - 2846457 + | transcriptional regulator, MarR family TERM 4028 2846885 - 2846908 + G 83 -8.2 -4.56597 | CCGGGAAGAATAGCG GCCAATATTG TAAC CGGTATTGGC TTTTTGGGCGCCGGC Dhaf_2643 2846675 - 2847340 + | MgtC/SapB transporter Dhaf_2644 2847407 - 2847826 + | rifampin ADP-ribosylating transferase TERM 4029 2847935 - 2847887 - f 100 -18.4 -5.22289 | opp_overlap 2847889, overlap 2847889 GAGTAAATATAAAAA CATACAGACAAGGGGCAACATC AGAAA AATGTTGCCCCCTGTCCGTATT GTCATGCCGCTGCTC TERM 4030 2847889 - 2847933 + F 100 -15.9 -3.41051 | opp_overlap 2847887 2847889 GTAAATATAAAAACA TACAGACAAGGGGCAACAT CAGAAAA ATGTTGCCCCCTGTCCGTA TTGTCATGCCGCTGC TERM 4031 2847933 - 2847889 - f 100 -21 -4.22132 | opp_overlap 2847889, overlap 2847887 GTAAATATAAAAACA TACAGACAAGGGGCAACATC AGAAA AATGTTGCCCCCTGTCCGTA TTGTCATGCCGCTGC Dhaf_2645 2848187 - 2848594 + | hypothetical protein Dhaf_2646 2849553 - 2848591 - | methionine-R-sulfoxide reductase TERM 4032 2850297 - 2850273 - g 73 -8.5 -3.80855 | TCCTGGAAAAATCAA GCGGCGTCATT GTC AATGTCGCCTC GGCAGGGGGACTAAA Dhaf_2647 2849873 - 2850631 + | short-chain dehydrogenase/reductase SDR TERM 4033 2850739 - 2850692 - f 73 -10.1 -2.99596 | gap 2, opp_overlap 2850693 2850700, overlap 2850700 TGCAAAGCAATGATA TGCCAAAA-TGACAGT-GGCGGA GTTT TCCGCGTACTGTCATTTTTGGCT TTATTTAATTTATTT TERM 4034 2850693 - 2850738 + F 100 -15.8 -4.66537 | gap 2, opp_overlap 2850692 2850700, overlap 2850700 GCAAAGCAATGATAT GCCAAAA-TGACAGTG-GCGGA GTTT TCCGCGTACTGTCATTTTTGGC TTTATTTAATTTATT TERM 4035 2850700 - 2850730 + F 100 -11.3 -4.88295 | gap 1, opp_overlap 2850700 2850692, overlap 2850693 AATGATATGCCAAAA TGACAGTG-GCGGA GTTT TCCGCGTACTGTCA TTTTTGGCTTTATTT TERM 4036 2850730 - 2850700 - f 83 -9.1 -4.18058 | gap 1, opp_overlap 2850693 2850700, overlap 2850692 AATGATATGCCAAAA TGACAGT-GGCGGA GTTT TCCGCGTACTGTCA TTTTTGGCTTTATTT Dhaf_2648 2850954 - 2853197 + | molybdopterin oxidoreductase Dhaf_2649 2853204 - 2853659 + | transcriptional regulator, BadM/Rrf2 family TERM 4037 2853747 - 2853774 + F 100 -12.8 -4.24342 | overlap 2853748 ATACTATTGCTTAGG TCAGGGATATCC AATC GGATATCCCTGC TTTATTCATGCAGGC TERM 4038 2853748 - 2853773 + F 100 -16.3 -3.14284 | overlap 2853747 TACTATTGCTTAGGT CAGGGATATCC AATC GGATATCCCTG CTTTATTCATGCAGG TERM 4039 2853892 - 2853933 + F 91 -4.5 -5.72053 | opp_overlap 2853898, overlap 2853906 TATCACTATAATATT TAAGTATTCTTACTGTTAG TTTC CTAACTGTCTGAATTCTTA TTTTTTCTTTAGTTA TERM 4040 2854180 - 2854196 + G 73 -3.7 -5.00616 | ATTGAAAAAGGAAGC TTAACCG CTT TGGTTGA TTTTTTGGAGGAAAA Dhaf_2650 2853970 - 2854422 + | transcriptional regulator, MarR family Dhaf_2651 2854529 - 2855878 + | MATE efflux family protein TERM 4041 2855909 - 2855932 + F 100 -13.2 -5.40072 | opp_overlap 2855909 2855905 ACCGGAAACAATGAA CCGCTTCTTC GCTT GAAGGAGCGG TTTTTTTACCAGGGA TERM 4042 2855932 - 2855909 - f 84 -11 -3.62054 | opp_overlap 2855909, overlap 2855905 ACCGGAAACAATGAA CCGCTTCTTC GCTT GAAGGAGCGG TTTTTTTACCAGGGA Dhaf_2652 2856065 - 2856826 + | protein of unknown function DUF88 Dhaf_2653 2856911 - 2857765 + | Phosphomethylpyrimidine kinase type-1 Dhaf_2654 2858770 - 2857895 - | Radical SAM domain protein Dhaf_2655 2859065 - 2860285 + | sodium:dicarboxylate symporter TERM 4043 2860335 - 2860370 + F 100 -10 -5.24129 | opp_overlap 2860330, overlap 2860337 ATAAAGAGTACAATT TGTCCATAAATTGAAT CTTA GTTCAGTTTATGGATA TTTTTTCTAAAAACG TERM 4044 2860337 - 2860368 + F 100 -10.4 -4.25873 | opp_overlap 2860330, overlap 2860335 AAAGAGTACAATTTG TCCATAAATTGAAT CTTA GTTCAGTTTATGGA TATTTTTTCTAAAAA Dhaf_2656 2860395 - 2861033 + | transcriptional regulator, TetR family Dhaf_2657 2861011 - 2861775 + | ABC transporter related TERM 4045 2862142 - 2862156 + G 71 -5 -4.55118 | overlap 2862143 TTTCGAAAATTGTTA TGATCA CCT TGATCG TTTTCTATCAGATTG Dhaf_2658 2861766 - 2862521 + | binding-protein-dependent transport systems inner membrane component TERM 4046 2862869 - 2862841 - g 73 -5.4 -4.63218 | gap 1 TTTTGCTGAACAAAA TCTGGA-GGTTAA ATTA TTGACCTTCCAGA GCCCCGTGGAGCTGC Dhaf_2659 2862644 - 2863618 + | NMT1/THI5 like domain protein TERM 4047 2863640 - 2863659 + F 100 -10.8 -4.73448 | opp_overlap 2863640 2863644, overlap 2863644 GCCTCTTACCAAAAA CAAAGCGT GCAG ACGCTTTG TTTTTGACTGTCTAT TERM 4048 2863659 - 2863640 - f 100 -10.8 -4.72272 | opp_overlap 2863640 2863644, overlap 2863644 GCCTCTTACCAAAAA CAAAGCGT GCAG ACGCTTTG TTTTTGACTGTCTAT TERM 4049 2863644 - 2863655 + F 78 -5.8 -4.89966 | opp_overlap 2863640 2863644, overlap 2863640 CTTACCAAAAACAAA GCGT GCAG ACGC TTTGTTTTTGACTGT TERM 4050 2863655 - 2863644 - f 82 -5.8 -4.91852 | opp_overlap 2863644 2863640, overlap 2863640 CTTACCAAAAACAAA GCGT GCAG ACGC TTTGTTTTTGACTGT Dhaf_2660 2863757 - 2864398 + | Carbonate dehydratase Dhaf_2661 2864436 - 2864699 + | hypothetical protein TERM 4051 2864777 - 2864732 - f 100 -19.1 -4.59109 | opp_overlap 2864740, overlap 2864734 2864740 GACAGCCCGGAAAAA GAGCAAAAGGCGGCGACTGGC TGAT GCCAGTCGTCGTCTTTTGCTG TAAACTATAACACGA TERM 4052 2864775 - 2864734 - f 100 -21.7 -3.90762 | opp_overlap 2864740, overlap 2864732 2864740 CAGCCCGGAAAAAGA GCAAAAGGCGGCGACTGGC TGAT GCCAGTCGTCGTCTTTTGC TGTAAACTATAACAC TERM 4053 2864769 - 2864740 - f 100 -13.5 -4.60746 | opp_overlap 2864740, overlap 2864734 2864732 GGAAAAAGAGCAAAA GGCGGCGACTGGC TGAT GCCAGTCGTCGTC TTTTGCTGTAAACTA TERM 4054 2864740 - 2864769 + F 100 -17.9 -4.35116 | opp_overlap 2864740 2864734 2864732 GGAAAAAGAGCAAAA GGCGGCGACTGGC TGAT GCCAGTCGTCGTC TTTTGCTGTAAACTA TERM 4055 2864902 - 2864960 + F 100 -31.7 -3.34962 | opp_overlap 2864902, overlap 2864921 GCATAATAACTATAA CGTTTAACCACACCCAAAATGATTGAA TTTAT TTTAATCATTTTGGGTGTGGTTAAACG TTATAAACTATAAGA TERM 4056 2864960 - 2864902 - f 100 -29.5 -3.63276 | opp_overlap 2864902 2864921 GCATAATAACTATAA CGTTTAACCACACCCAAAATGATTGAA TTTAT TTTAATCATTTTGGGTGTGGTTAAACG TTATAAACTATAAGA Dhaf_2662 2865085 - 2865603 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 4057 2865736 - 2865748 + G 73 -4.7 -4.66537 | opp_overlap 2865736, overlap 2865737 GACAGCGGGAAGGCA TCCGG TAT CCGGC TTTTCTGTTAAGGCA Dhaf_2663 2865600 - 2866388 + | hypothetical protein TERM 4058 2866627 - 2866609 - g 77 -4.4 -5.08601 | GCATCGCAATAAAAA CGTTGGGC GAA GCCTACCG GGATGTCTTTGGCTA TERM 4059 2867216 - 2867200 - g 71 -9.4 -3.53811 | opp_overlap 2867193 2867192 GGTATGTTTCGGAAA GTCCGG GTTTG CCGGAC TCACAGACCGCCGCG Dhaf_2664 2866410 - 2867300 + | ABC transporter related Dhaf_2665 2867297 - 2868550 + | hypothetical protein TERM 4060 2868584 - 2868625 + T 70 -5.9 -4.36914 | gap 1, opp_overlap 2868587, overlap 2868587 TTAGCGGCATAAAGA AAAGCGCCTTTCTC-CACTG TTA TGGTGCGAAAAGGGCGCTTC TTTTATAACAAGGAA TERM 4061 2868622 - 2868587 - T 84 -6.2 -4.99043 | gap 1, opp_overlap 2868587 2868584 GCGGCATAAAGAAAA GCGCCTTTCTC-CAC TGTTATG GTGCGAAAAGGGCGC TTCTTTTATAACAAG TERM 4062 2868587 - 2868622 + T 79 -7.6 -4.30995 | gap 1, opp_overlap 2868587, overlap 2868584 GCGGCATAAAGAAAA GCGCCTTTCTC-CACTG TTA TGGTGCGAAAAGGGCGC TTCTTTTATAACAAG Dhaf_2666 2869833 - 2868661 - | TraB family protein TERM 4063 2868791 - 2868781 - G 71 -6.8 -4.15565 | TTGATTATTCCAAAA GCCT TTA AGGC TGAGAATATCCTCGG TERM 4064 2868861 - 2868847 - G 73 -10 -3.34517 | overlap 2868845 2868859 AGGGCGTTTGAAATA GGCTTG CAC CAAGCC GGCAAACCAGCCGGC TERM 4065 2868876 - 2868859 - G 70 -9.8 -3.14683 | overlap 2868847 2868845 2868869 ATAGGCTTGCACCAA GCCGGC AAACCA GCCGGC GGCGATTAAAGGATG Dhaf_2667 2870013 - 2870621 + | hypothetical protein Dhaf_2668 2870739 - 2870963 + | Domain of unknown function DUF1858 Dhaf_2669 2870974 - 2872206 + | protein of unknown function DUF438 TERM 4066 2872218 - 2872254 + F 86 -6 -5.39721 | gap 1 GTAACTATAAGGCTG GCTGTCCTT-TATGG AGTATGAA CCATGGAAGGGCAGC TTTTTTCTATAATCC Dhaf_2670 2872378 - 2873154 + | zinc/iron permease TERM 4067 2873210 - 2873245 + F 100 -8.3 -5.95539 | CCATCCGGCAAAAAT CGTTCTTTCACTCAC CTGAAC GTGGGGGGAAGGACG TTTTTTTCTTTAAGG TERM 4068 2873365 - 2873379 + G 85 -5.6 -5.28778 | TTTAGTCGTTATTGT CCGTTC CCT GATCGG TTTTTTCTCGCTGCT Dhaf_2671 2873339 - 2874067 + | protein of unknown function DUF421 Dhaf_2672 2874080 - 2874445 + | hypothetical protein Dhaf_2673 2874708 - 2874415 - | L-lactate permease-like protein TERM 4069 2874484 - 2874452 - G 100 -16.4 -3.6682 | opp_overlap 2874452 GGCCAGTGAGGGAAA CTGCCCTTCCGG GCAATTAAG CCGGAAGGGCAG TTCTTTACGCTAATC TERM 4070 2874452 - 2874484 + g 100 -16.4 -3.94634 | opp_overlap 2874452 GGCCAGTGAGGGAAA CTGCCCTTCCGG GCAATTAAG CCGGAAGGGCAG TTCTTTACGCTAATC TERM 4071 2874965 - 2874928 - R 84 -10.8 -3.67792 | opp_overlap 2874934, overlap 2874934 CTATACTGAGGGAAA CAAAAAGAAGCATGCC GGCTTG AGCATGCTTCTTTTCA GTTGATAGGTGGCTG TERM 4072 2874959 - 2874934 - R 100 -9.8 -5.30616 | opp_overlap 2874934, overlap 2874928 TGAGGGAAACAAAAA GAAGCATGCC GGCTTG AGCATGCTTC TTTTCAGTTGATAGG TERM 4073 2874934 - 2874959 + r 86 -9.1 -4.30014 | gap 1, opp_overlap 2874934 2874928 TGAGGGAAACAAAAA GAAGCATGC-CG GCT TGAGCATGCTTC TTTTCAGTTGATAGG Dhaf_2674 2877576 - 2874994 - | N-acetylmuramoyl-L-alanine amidase TERM 4074 2875375 - 2875389 + g 71 -8.6 -3.73008 | CAGAGCCACACGAGC CTTGAG ATC CTCAAG TTCTGTATATTTGGA TERM 4075 2876291 - 2876307 + g 73 -3.7 -4.85599 | TGAATAGTAGCATCT TTAGGGA TCG TCACTAA TTTTTCTCCGCTGGA TERM 4076 2876513 - 2876491 - G 84 -13.5 -2.62184 | opp_overlap 2876475 2876471 2876482 2876512, overlap 2876476 GGTGGTCTTATACCA CCCTGCTTG TTCCT CAAGCAGGG TGATGAGTGTCCCTT TERM 4077 2877557 - 2877567 + g 77 -4 -5.07107 | opp_overlap 2877557 AGCGAAGTAATTAGA GTAA AAA TTAC TTTTTTCACCGTTTC Dhaf_2675 2877738 - 2878058 + | hypothetical protein TERM 4078 2878113 - 2878086 - f 100 -8.5 -4.87626 | gap 1, opp_overlap 2878086 TCTGAATAGGAAAAA TAGCCCGCCAGT CTAGT ACC-GCGGGCTA TTTTTTTATGTTGAG TERM 4079 2878086 - 2878113 + F 100 -6.3 -5.80817 | gap 1, opp_overlap 2878086 TCTGAATAGGAAAAA TAGCCCGCCAGT CTAGT AC-CGCGGGCTA TTTTTTTATGTTGAG TERM 4080 2878410 - 2878389 - g 77 -10.3 -3.53091 | overlap 2878399 ATTGTGCCTGGGAAA TCATCGATA ACGC TATCGATGA AGCGGGGGCCGGCTT Dhaf_2676 2878259 - 2880175 + | DNA topoisomerase (ATP-hydrolyzing) TERM 4081 2881435 - 2881418 - g 71 -6.9 -4.25104 | opp_overlap 2881419, overlap 2881419 TCCGTTCCAGTAAAA CCCCGGC CCTG GCCAAGG CCGGCTTGATCACCC Dhaf_2677 2880214 - 2882640 + | DNA gyrase, A subunit TERM 4082 2882709 - 2882652 - f 100 -17.3 -3.60792 | opp_overlap 2882652, overlap 2882662 ATGATTGAGATAGAA TAGGCATAAATCAGCAAGAATCCTTTA TCTA CAAGGGTTTCACGCTGATTTATGCCTA TTTCTTTATTGCCTG TERM 4083 2882652 - 2882709 + F 100 -16.6 -4.69214 | opp_overlap 2882652 2882662 ATGATTGAGATAGAA TAGGCATAAATCAGCAAGAATCCTTT ATCTAC AAGGGTTTCACGCTGATTTATGCCTA TTTCTTTATTGCCTG Dhaf_2678 2883019 - 2883372 + | hypothetical protein TERM 4084 2883413 - 2883390 - f 79 -6.6 -4.59342 | opp_overlap 2883392, overlap 2883391 2883392 GTTACTATAAATAAA CGGGGCTGTC GCAA GACAGCCCTT ATTCTGCTCACAACC TERM 4085 2883412 - 2883391 - f 76 -10.1 -3.34882 | opp_overlap 2883392, overlap 2883390 2883392 TTACTATAAATAAAC GGGGCTGTC GCAA GACAGCCCT TATTCTGCTCACAAC TERM 4086 2883392 - 2883411 + F 100 -13.6 -3.84406 | opp_overlap 2883391 2883390 2883392 TACTATAAATAAACG GGGCTGTC GCAA GACAGCCC TTATTCTGCTCACAA TERM 4087 2883411 - 2883392 - f 93 -13.6 -2.60206 | opp_overlap 2883392, overlap 2883391 2883390 TACTATAAATAAACG GGGCTGTC GCAA GACAGCCC TTATTCTGCTCACAA TERM 4088 2883724 - 2883696 - g 73 -10.1 -3.18452 | AGGATCTCAACGCAA GGCTGGCCCAGGC TCA GCAGGGGGCAGCC CGTCTGCATAAAGTT Dhaf_2679 2883599 - 2884612 + | hypothetical protein Dhaf_2680 2884621 - 2885883 + | AMMECR1 domain protein Dhaf_2681 2885907 - 2886851 + | Radical SAM domain protein Dhaf_2682 2886860 - 2887318 + | GCN5-related N-acetyltransferase TERM 4089 2887384 - 2887416 + F 88 -6.9 -5.09762 | overlap 2887385 AAACCAGGGGTTTAG ACGGGTTCGCGGTGT ATT GCATTGCAAACCCGC TTTTTATATTGCCCT TERM 4090 2887385 - 2887415 + F 82 -10.4 -3.64773 | overlap 2887384 AACCAGGGGTTTAGA CGGGTTCGCGGTGT ATT GCATTGCAAACCCG CTTTTTATATTGCCC Dhaf_2683 2887590 - 2888288 + | NLP/P60 protein TERM 4091 2888345 - 2888363 + F 100 -9.5 -5.26247 | opp_overlap 2888345 2888344 ACCGATACAGTAAAG GGGCTGC TTAGT GCGGCCC TTTTCTTTGTTTTAA TERM 4092 2888727 - 2888753 + F 82 -6.7 -4.87893 | gap 1 CATTATCAATTGTCT TCCCAAATATCC TGGC GGGTATT-GGGA TTTTTGCTTGAAGTT TERM 4093 2889226 - 2889212 - g 73 -3.4 -5.00616 | opp_overlap 2889212 2889214, overlap 2889214 TGCTCCTCGAAAAAA GCGGTG AAA CGCCAC CTTATGTTTTAGTGG TERM 4094 2889362 - 2889376 + G 71 -8.6 -3.71848 | CAGTTAAATTTTCCA CTGCTT TAA AAGCAG TTATTCATGGAACAA TERM 4095 2889696 - 2889672 - g 90 -5.7 -5.50499 | TGAGACTCAAAAAAA GCTGCTCGC TTGGTCG GCAAACAGC CGCATGAAGGTAATT Dhaf_2684 2888866 - 2889798 + | alpha/beta hydrolase fold protein TERM 4096 2889826 - 2889861 + F 71 -4 -4.84274 | GCTCAGAGGATATAC GCCATGATTTGAAG ATAGATTC CACCAAGTCATGGC TTTTTGCTGTCATTC TERM 4097 2890738 - 2890724 - g 71 -4.2 -4.74103 | GCCCGAACCTAAAAA GCATGA ACT TCCTGC AGGTACGGCAGATGC TERM 4098 2891325 - 2891337 + G 75 -10.5 -3.27298 | opp_overlap 2891325 TTTTCAATGAAAAAA CCGGC AGC GCCGG TTGGTCCTTCCCAGG TERM 4099 2891337 - 2891325 - g 100 -10.5 -5.26875 | opp_overlap 2891325 TTTTCAATGAAAAAA CCGGC AGC GCCGG TTGGTCCTTCCCAGG Dhaf_2685 2890164 - 2891366 + | major facilitator superfamily MFS_1 TERM 4100 2891400 - 2891436 + F 100 -15.4 -4.0056 | gap 1, opp_overlap 2891406, overlap 2891406 CATCAATCTTCGAAG GGAAAAGCTGAGGGTTC TGCG GAACCC-CAGCTTTTTC TTTATGGGTATTTAT TERM 4101 2891430 - 2891406 - f 100 -10.8 -4.27316 | gap 1, opp_overlap 2891400 2891406 TCTTCGAAGGGAAAA GCTGAGGGTTC TGCG GAACCC-CAGC TTTTTCTTTATGGGT TERM 4102 2891406 - 2891430 + F 100 -10.8 -5.38958 | gap 1, opp_overlap 2891406, overlap 2891400 TCTTCGAAGGGAAAA GCTGAGGGTTC TGCG GAACCC-CAGC TTTTTCTTTATGGGT TERM 4103 2891484 - 2891519 + F 100 -13.6 -4.56597 | opp_overlap 2891487 2891494, overlap 2891487 ACCCTGGTCCGGGAG TAATCCAAAATCTTCA ACGT TGAAGATTTTGGATTC TTTTTCGCCCAGGGC TERM 4104 2891487 - 2891516 + F 100 -15.3 -4.40561 | opp_overlap 2891487 2891494, overlap 2891484 CTGGTCCGGGAGTAA TCCAAAATCTTCA ACGT TGAAGATTTTGGA TTCTTTTTCGCCCAG TERM 4105 2891516 - 2891487 - f 100 -15.3 -3.14132 | opp_overlap 2891487 2891484, overlap 2891494 CTGGTCCGGGAGTAA TCCAAAATCTTCA ACGT TGAAGATTTTGGA TTCTTTTTCGCCCAG TERM 4106 2891509 - 2891494 - f 72 -6.2 -4.30014 | opp_overlap 2891487 2891484, overlap 2891487 GGGAGTAATCCAAAA TCTTCA ACGT TGAAGA TTTTGGATTCTTTTT Dhaf_2686 2891758 - 2892294 + | GCN5-related N-acetyltransferase Dhaf_2687 2892408 - 2892800 + | amino acid-binding ACT domain protein Dhaf_2688 2892965 - 2894758 + | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 4107 2894838 - 2894790 - f 100 -8.2 -4.88736 | opp_overlap 2894821, overlap 2894821 GATCATCCAGAAAAA CGTCCCAAAAGCGGATAATT GCTAATCAA AAGCGTCCGCTTCCGGGACG CTTTTTTATACTATA TERM 4108 2894821 - 2894839 + F 91 -7.4 -5.34555 | opp_overlap 2894790 2894821 AATTGCTAATCAAAA GCGTCC GCTTCCG GGACGC TTTTTTATACTATAC TERM 4109 2894839 - 2894821 - f 78 -7.4 -4.41895 | opp_overlap 2894821, overlap 2894790 AATTGCTAATCAAAA GCGTCC GCTTCCG GGACGC TTTTTTATACTATAC Dhaf_2689 2895071 - 2895589 + | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Dhaf_2690 2895586 - 2896551 + | LAO/AO transport system ATPase TERM 4110 2896655 - 2896633 - g 74 -9.2 -3.69684 | overlap 2896654 AAAGGTATGCAAGAA GATTTTAGCC GTT GGCAAAAATC CTACCAGGAGCAGAA TERM 4111 2896664 - 2896654 - g 73 -5.4 -4.56775 | overlap 2896633 AGCCGTTGGCAAAAA TCCT ACC AGGA GCAGAAAGAGCGCCA TERM 4112 2898216 - 2898226 + G 77 -6.8 -4.58395 | GGAAATCGTCGCTGT CCTC AAA GAGG TTTTTGGGGAATACA Dhaf_2691 2896624 - 2898261 + | methylmalonyl-CoA mutase, large subunit TERM 4113 2898626 - 2898637 + G 83 -7.2 -4.72272 | TAATTGAAGAGGGAT GCGC AGAA GCGC TTTTTACTCCGGGCA Dhaf_2692 2898289 - 2898711 + | cobalamin B12-binding domain protein TERM 4114 2898721 - 2898777 + F 82 -3 -5.46698 | gap 1, opp_overlap 2898724 2898725, overlap 2898724 2898725 2898726 GGCTAATCATTGCTA AAACCGTCCCGAAAGCGGACGCATTGT GCAC ACAAA-TGCCTGCTTTCGGGACAATTG TTTTTTACTTTTCCA TERM 4115 2898724 - 2898774 + F 74 -4.7 -4.78121 | gap 1, opp_overlap 2898724 2898725, overlap 2898721 2898725 2898726 TAATCATTGCTAAAA CCGTCCCGAAAGCGGACGCATTGT GCAC ACAAA-TGCCTGCTTTCGGGACAA TTGTTTTTTACTTTT TERM 4116 2898774 - 2898724 - f 83 -9.1 -4.12902 | gap 1, opp_overlap 2898721 2898724 2898725 2898726, overlap 2898725 TAATCATTGCTAAAA CCGTCCCGAAAGCGGACGCATTGT GCAC ACAA-ATGCCTGCTTTCGGGACAA TTGTTTTTTACTTTT TERM 4117 2898725 - 2898773 + F 71 -8.2 -3.43212 | gap 1, opp_overlap 2898724 2898725, overlap 2898724 2898721 2898726 AATCATTGCTAAAAC CGTCCCGAAAGCGGACGCATTGT GCAC ACAAA-TGCCTGCTTTCGGGACA ATTGTTTTTTACTTT TERM 4118 2898773 - 2898725 - f 77 -10.4 -3.07259 | gap 1, opp_overlap 2898725 2898724 2898721 2898726, overlap 2898724 AATCATTGCTAAAAC CGTCCCGAAAGCGGACGCATTGT GCAC ACAA-ATGCCTGCTTTCGGGACA ATTGTTTTTTACTTT TERM 4119 2898726 - 2898772 + F 80 -11.7 -2.63487 | gap 1, opp_overlap 2898725 2898724, overlap 2898725 2898724 2898721 ATCATTGCTAAAACC GTCCCGAAAGCGGACGCATTGT GCAC ACAAA-TGCCTGCTTTCGGGAC AATTGTTTTTTACTT Dhaf_2693 2899058 - 2899897 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 4120 2899983 - 2899961 - g 81 -5.7 -4.87273 | gap 1 AAGATGTCAGAAAAA GTG-GTTCAA AAAC TTGAACACAC CAGAAAAAACTATTA TERM 4121 2901257 - 2901290 + G 78 -11.7 -2.9914 | gap 1, overlap 2901260 GGAGTATGTGGTATC TGTGCAGGGCA-CGCC CAG GGCGATGCCATGCTCA TCTATGTGGAGCCTG TERM 4122 2901260 - 2901287 + G 78 -12 -2.72799 | gap 1, overlap 2901257 GTATGTGGTATCTGT GCAGGGCA-CGCC CAG GGCGATGCCATGC TCATCTATGTGGAGC Dhaf_2694 2899949 - 2901310 + | acetyl-CoA acetyltransferase TERM 4123 2901695 - 2901675 - g 74 -6.8 -4.3613 | GTTAAAAGAAAAATA CCTGGAGC GATTG GCTACAGG GGAGATTATCGGAGC TERM 4124 2902028 - 2902004 - g 74 -10.8 -2.85366 | overlap 2902003 TTGAAAATGTCAAAG TCCCCAAAGA AAATG TCCTTGGGGA GATCAATAACGGATT Dhaf_2695 2901346 - 2902494 + | acyl-CoA dehydrogenase domain protein Dhaf_2696 2902606 - 2903574 + | Glutaconate CoA-transferase Dhaf_2697 2903579 - 2904388 + | coenzyme A transferase TERM 4125 2904386 - 2904440 + F 100 -24.7 -3.35046 | opp_overlap 2904390 2904397, overlap 2904390 2904397 GGGATTATTATGAAG TAAAGACAAAAGACGGACTATCGGC GTAAA GCTGATAGCCCGTCTTTTGTCTTTG TCTTTAAAGAGGTAG TERM 4126 2904436 - 2904390 - f 100 -23.3 -3.97042 | opp_overlap 2904390 2904386 2904397, overlap 2904397 TTATTATGAAGTAAA GACAAAAGACGGACTATCGGC GTAAA GCTGATAGCCCGTCTTTTGTC TTTGTCTTTAAAGAG TERM 4127 2904390 - 2904436 + F 100 -23.3 -4.32857 | opp_overlap 2904390 2904397, overlap 2904386 2904397 TTATTATGAAGTAAA GACAAAAGACGGACTATCGGC GTAAA GCTGATAGCCCGTCTTTTGTC TTTGTCTTTAAAGAG TERM 4128 2904397 - 2904429 + F 100 -14.2 -4.88684 | opp_overlap 2904390 2904397, overlap 2904390 2904386 GAAGTAAAGACAAAA GACGGACTATCGGC GTAAA GCTGATAGCCCGTC TTTTGTCTTTGTCTT TERM 4129 2904429 - 2904397 - f 100 -14.2 -4.84539 | opp_overlap 2904397 2904390 2904386, overlap 2904390 GAAGTAAAGACAAAA GACGGACTATCGGC GTAAA GCTGATAGCCCGTC TTTTGTCTTTGTCTT Dhaf_2698 2904639 - 2904851 + | hypothetical protein TERM 4130 2904917 - 2904942 + T 100 -9.1 -6.20267 | opp_overlap 2904917 AAAAGTGATAAAAGC CTGAGAGATGC ATAA GTATCTTTCAG TTTTTTTATTTTTAG Dhaf_2699 2906043 - 2905060 - | integrase family protein TERM 4131 2905772 - 2905792 + g 85 -6.1 -5.01042 | ATAGCAGCTTGTTTG CGGGCTAAG GCT CTTACTCCG TTTTTCCTTTGGGTT TERM 4132 2906213 - 2906203 - H 74 -4 -4.93296 | opp_overlap 2906203 GTACGATTACAAAAA TACT GCT AGTA TGGATTGGGCAATTA Dhaf_2700 2906261 - 2906698 + | hypothetical protein TERM 4133 2906740 - 2906705 - f 100 -14.8 -3.50853 | opp_overlap 2906709, overlap 2906690 2906707 2906709 GCTTTGTAACTATAA TACATAGCCGGCCAGA GATC TCTGGCCGGCTATTTC TTTTATATTATTTTA TERM 4134 2906738 - 2906707 - f 100 -17.4 -3.32946 | opp_overlap 2906709, overlap 2906690 2906705 2906709 TTTGTAACTATAATA CATAGCCGGCCAGA GATC TCTGGCCGGCTATT TCTTTTATATTATTT TERM 4135 2906736 - 2906709 - f 100 -20 -3.2302 | opp_overlap 2906709, overlap 2906690 2906707 2906705 TGTAACTATAATACA TAGCCGGCCAGA GATC TCTGGCCGGCTA TTTCTTTTATATTAT TERM 4136 2906709 - 2906736 + F 100 -20 -4.89519 | opp_overlap 2906690 2906709 2906707 2906705 TGTAACTATAATACA TAGCCGGCCAGA GATC TCTGGCCGGCTA TTTCTTTTATATTAT TERM 4137 2906800 - 2906766 - f 76 -9.4 -3.50393 | opp_overlap 2906762 2906766 2906768 TTTTACTTTACATAA TATCTATTCCTGGACA TGT TGACCAGAAATGGATA TGTAATATCTTAAAA TERM 4138 2906766 - 2906800 + F 71 -9.4 -2.92175 | opp_overlap 2906766, overlap 2906762 2906768 TTTTACTTTACATAA TATCTATTCCTGGACA TGT TGACCAGAAATGGATA TGTAATATCTTAAAA Dhaf_2701 2906994 - 2907800 + | hypothetical protein Dhaf_2702 2907807 - 2908103 + | hypothetical protein Dhaf_2703 2908124 - 2908360 + | hypothetical protein Dhaf_2704 2908374 - 2909537 + | hypothetical protein Dhaf_2705 2909542 - 2909703 + | hypothetical protein Dhaf_2706 2909704 - 2909868 + | hypothetical protein Dhaf_2707 2909865 - 2910023 + | hypothetical protein Dhaf_2708 2910056 - 2910214 + | hypothetical protein TERM 4139 2910222 - 2910244 + F 100 -13.5 -4.42974 | opp_overlap 2910215 TTATTTAATTCCGGT GGGGGAAAG GCTTG CTTTCCCCC TTTATTATATCTAGG Dhaf_2709 2910272 - 2911138 + | hypothetical protein TERM 4140 2911189 - 2911143 - f 71 -9.7 -2.61873 | opp_overlap 2911145 2911151, overlap 2911142 2911140 ATGATGCTTAAATAC TGTCATAATGCTAGCTTGT AAGTTGACA ACATGCTAGCATTATGATA TACTTAATTCATGAG TERM 4141 2911145 - 2911187 + F 93 -12.3 -2.97613 | opp_overlap 2911143 2911142 2911140, overlap 2911151 GATGCTTAAATACTG TCATAATGCTAGCTTGT AAGTTGACA ACATGCTAGCATTATGA TATACTTAATTCATG Dhaf_2710 2911221 - 2911487 + | hypothetical protein Dhaf_2711 2911539 - 2911721 + | hypothetical protein Dhaf_2712 2911732 - 2911923 + | hypothetical protein Dhaf_2713 2911953 - 2912165 + | hypothetical protein TERM 4142 2912178 - 2912200 + F 100 -11.3 -5.95946 | opp_overlap 2912177 2912175 TAATGCAATACATAT TCGGCCTGG TAATC CCAGGTCGA TTTTTTTATTGTTCG TERM 4143 2912985 - 2912975 - f 82 -3.2 -5.45802 | opp_overlap 2912983 GGCCTAAAAGAAAAA GAGC ACT ACTC TGTATTAAAACGATA TERM 4144 2912983 - 2913012 + F 91 -6.6 -5.57765 | opp_overlap 2912975 AGAAAAAGAGCACTA CTCTGTATTAAA ACGATA TTTAGTGCAGAG TTTATTTTTTTTTTT Dhaf_2714 2913208 - 2913390 + | hypothetical protein TERM 4145 2913469 - 2913457 - T 100 -4.1 -6.09196 | CCCAAAATAAAAAAA GAAAG ACC CTTCC CTTAGCTGAGTTCCT Dhaf_2715 2913774 - 2913544 - | hypothetical protein TERM 4146 2913814 - 2913801 - R 71 -6.7 -4.16842 | overlap 2913805 CCCATGTTTAATAAA CTGAC CCTA GTCAG CTTAGACTACGGTAC Dhaf_2716 2914879 - 2913821 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 4147 2914118 - 2914142 + g 100 -11.5 -5.65513 | overlap 2914113 2914099 2914098 CTGCTTCCAACCGTT GGCATCGGT CCATTCT ACCGATGCC TTTTTTTGATTGATA TERM 4148 2914845 - 2914867 + g 80 -4.2 -5.20216 | opp_overlap 2914849, overlap 2914846 2914849 ATCATCGTTAAAAAC GTAAGGAAAA CTC TTTTCCTTGA TTTTTTACTCATATC TERM 4149 2915006 - 2914977 - R 88 -10.9 -3.81689 | opp_overlap 2914977 AAGACCATCATGAAA TTACCAACCAATT GGCA ATTTGGTTGGTAA TAGGGTTGTTCTGCT Dhaf_2717 2915841 - 2915023 - | Peptidase M23 Dhaf_2718 2916263 - 2915901 - | Peptidoglycan-binding LysM TERM 4150 2916174 - 2916191 + g 70 -7.7 -3.94404 | opp_overlap 2916174 2916172 2916169 2916177, overlap 2916177 CAGCATATAAGAACA CAGCTGC CTTT GCAGTTG TTTCATTCGATAATT Dhaf_2719 2916434 - 2917048 + | SOS-response transcriptional repressor, LexA TERM 4151 2917074 - 2917112 + F 100 -13.3 -5.55769 | gap 1, opp_overlap 2917074, overlap 2917063 ACAGGGACAGCAAAA GCAGACCTCCATTCCACA CTGA TGTGG-GTGGATGTCTGC TTTTTTATTATGAAA TERM 4152 2917112 - 2917074 - f 100 -11.1 -4.36262 | gap 1, opp_overlap 2917063 2917074 ACAGGGACAGCAAAA GCAGACCTCCATTCCACA CTGA TGTGGG-TGGATGTCTGC TTTTTTATTATGAAA Dhaf_2720 2917234 - 2918034 + | Abortive infection protein TERM 4153 2918076 - 2918038 - T 74 -4.5 -4.87786 | opp_overlap 2918040, overlap 2918041 CGAATGGTATAAAAA TAACCCTGAACTCCGCT GACTA AACGGCTTTCAGGGCTG TATACCGATATACTA TERM 4154 2918073 - 2918041 - T 87 -8.4 -4.53475 | opp_overlap 2918040, overlap 2918038 ATGGTATAAAAATAA CCCTGAACTCCGCT GACTA AACGGCTTTCAGGG CTGTATACCGATATA Dhaf_2721 2919174 - 2918089 - | D-alanine/D-alanine ligase Dhaf_2722 2919895 - 2919326 - | signal peptidase I TERM 4155 2919468 - 2919457 - G 89 -5.8 -5.18726 | overlap 2919459 CTCCCATAACAAAAA CGGA ACCT TCCG GAACGACCAAAGGCT Dhaf_2723 2921168 - 2919906 - | Aluminium resistance family protein TERM 4156 2920175 - 2920165 - G 73 -3.2 -4.84017 | AAGCCCTGACAAAAA GCAA TCA TCGC CTCCCGGGAATTGAG Dhaf_2724 2922838 - 2921246 - | GTP-binding proten HflX TERM 4157 2921712 - 2921763 + g 85 -2.9 -5.56264 | GCTTTTTGCAAAAAG GTGGTCTTCCCCGCATTGGTATA ACCGAC TAAAGCGATGAGGGGGATGCCGC TTTTTTCTCTTTGCC TERM 4158 2922770 - 2922748 - G 100 -19.2 -3.3854 | opp_overlap 2922739 AATCATCATGGATAA GCTCCGGACG ATC CGTCCGGAGC GAAGTCAAATCCTTG Dhaf_2725 2923852 - 2922887 - | AAA ATPase central domain protein Dhaf_2726 2925752 - 2923920 - | GTP-binding protein TypA TERM 4159 2924421 - 2924389 - G 71 -8.4 -3.72576 | gap 1 GTTTCGGTCAGGAAA TCCC-CCCGAAAGCC GATC AGCCCCCGGGCGGGA ACTTTGAATTCTACC TERM 4160 2925651 - 2925664 + g 73 -8.1 -4.0492 | opp_overlap 2925627 2925626 AACATTTTGATTGGC GCGGA AGGT TCCGC TTTGTCTGAGCATTG Dhaf_2727 2926036 - 2925932 - | hypothetical protein Dhaf_2728 2926246 - 2926341 + | hypothetical protein TERM 4161 2926587 - 2926604 + T 84 -9.9 -3.79251 | opp_overlap 2926587 TGACACACGAAAAAA GCCTGAT GGGA ATCAGGC TTTACTGATGCGATG TERM 4162 2926604 - 2926587 - T 100 -9.9 -5.24989 | opp_overlap 2926587 TGACACACGAAAAAA GCCTGAT GGGA ATCAGGC TTTACTGATGCGATG Dhaf_2729 2926880 - 2926629 - | RNA chaperone Hfq Dhaf_2730 2927859 - 2926915 - | tRNA delta(2)-isopentenylpyrophosphate transferase Dhaf_2731 2928695 - 2927856 - | protein of unknown function DUF548 Dhaf_2732 2930900 - 2928708 - | DNA mismatch repair protein MutL TERM 4163 2930842 - 2930854 + g 76 -9.1 -3.90856 | opp_overlap 2930825 GGGCGCTCCACCACT TCGCC GGC GGCGA TTTGATTGGCGGCTT Dhaf_2733 2932222 - 2930897 - | histone deacetylase superfamily Dhaf_2734 2933898 - 2932219 - | Hydantoinase/oxoprolinase TERM 4164 2932327 - 2932316 - G 74 -3 -5.06103 | ACAACTGGGAAAAAA TCAA AAGG TTGA GTCTTAAACTCCAGT Dhaf_2735 2936627 - 2934075 - | DNA mismatch repair protein MutS TERM 4165 2935768 - 2935780 + g 85 -10.5 -4.26903 | CGTCTGAGCAGGCGG CCGCC GAA GGCGG TTTTGGTGAAGTCCA Dhaf_2736 2936841 - 2936713 - | hypothetical protein TERM 4166 2937633 - 2937654 + r 95 -13.1 -3.14344 | opp_overlap 2937633, overlap 2937638 GGCGTATATTCTAAA GGGAAGAGT GTAC ACTCTTCCC TTGCTGCGCCCAATC TERM 4167 2937654 - 2937633 - R 100 -13.1 -3.63627 | opp_overlap 2937633 2937638 GGCGTATATTCTAAA GGGAAGAGT GTAC ACTCTTCCC TTGCTGCGCCCAATC Dhaf_2737 2938106 - 2937711 - | protein of unknown function DUF1333 TERM 4168 2937813 - 2937800 - G 71 -6.7 -4.18018 | opp_overlap 2937806 TTGCTTGAGCCAAAA CACCA TTGA TGGTG TCCAGCATCTTTGTG TERM 4169 2937993 - 2937976 - G 76 -8.5 -4.11216 | opp_overlap 2937960 2937975 TGCTCATTTTGAAAA TCAGCAA TGAT TTGCTGA GCTTGTTCGTCAGCC Dhaf_2738 2939542 - 2938199 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 4170 2938278 - 2938242 - G 76 -10.9 -3.15427 | opp_overlap 2938242 AACAGCGTCCAGGAA TTGGCATCCTGAATCAG CAC CTGAACCAAGGTGCCAA TTAATTGGGCTTCCC Dhaf_2739 2939743 - 2939913 + | protein of unknown function DUF1540 TERM 4171 2939918 - 2939955 + T 90 -7.1 -5.09225 | gap 1, opp_overlap 2939925, overlap 2939925 AAAAAGTTTAAGCAT GTGAT-AAGGGAACCGGA AAA TCCGGTTCCCTTTAGTAA TTTTTTAAATAAAGT TERM 4172 2939925 - 2939947 + T 100 -17.8 -3.98747 | opp_overlap 2939925, overlap 2939918 TTAAGCATGTGATAA GGGAACCGGA AAA TCCGGTTCCC TTTAGTAATTTTTTA TERM 4173 2939947 - 2939925 - T 100 -17.8 -3.35015 | opp_overlap 2939918 2939925 TTAAGCATGTGATAA GGGAACCGGA AAA TCCGGTTCCC TTTAGTAATTTTTTA Dhaf_2740 2940485 - 2939991 - | hydrogenase maturation protease Dhaf_2741 2941184 - 2940561 - | Ni/Fe-hydrogenase, b-type cytochrome subunit TERM 4174 2941243 - 2941264 + r 70 -7.3 -3.84719 | CAATCCTCTTGAGCC GTCCACTGA AAGA TCAGTTGAC TTTGAATTTGCGGAT Dhaf_2742 2942812 - 2941256 - | Hydrogen:quinone oxidoreductase TERM 4175 2942389 - 2942400 + g 71 -4.4 -4.78848 | TATCCCCAGCCGCAA TCAG CTTG CTGA TTTTGTCTTTAACAC Dhaf_2743 2943904 - 2942816 - | hydrogenase (NiFe) small subunit HydA Dhaf_2744 2945432 - 2944188 - | transposase IS4 family protein TERM 4176 2944309 - 2944322 + g 77 -4.5 -4.83615 | TTGGCAGCTTTCCTT CTTCG TCGT CGGAG TTTTTCTAAAAACTC TERM 4177 2945441 - 2945492 + r 84 -3.9 -5.46276 | gap 1, opp_overlap 2945440, overlap 2945480 CCTGCATTTTAAATC TCCTTATAATTTGAGATTTGGGCA AGGAC TACCCTA-TCTCTTATTATAAGGA TTTTTTATGTGTATT TERM 4178 2945550 - 2945573 + r 72 -7.6 -3.8297 | ATTTCGGGTCTATTT GCTTAAATTT AGCT AAATTTGAGC TTTGACATTTTTGTT TERM 4179 2945745 - 2945715 - R 100 -12.1 -5.4505 | opp_overlap 2945705 2945715 TTTGTTAACAAAAAA TGAGAGTATCTCA TTTTT TGAAATACTCTCA TCGGCGCTGGCATCT TERM 4180 2945715 - 2945727 + r 84 -6.3 -5.06451 | opp_overlap 2945715, overlap 2945705 TTTGTTAACAAAAAA TGAGA GTA TCTCA TTTTTTGAAATACTC Dhaf_2745 2947014 - 2945743 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 4181 2946611 - 2946596 - G 76 -7.5 -4.43189 | opp_overlap 2946596 2946596 ATTAAGCTGACAAAA GCGGC GGTATT GCCGC TGATATGCTCGGCGA Dhaf_2746 2947874 - 2947029 - | degV family protein TERM 4182 2947993 - 2947976 - R 100 -9.1 -5.39721 | opp_overlap 2947976 TTATTATACAAAAAA GCCCACA TTTA CGTGGGC TTATCCTATTTTATG TERM 4183 2947976 - 2947993 + r 73 -8.4 -3.6249 | opp_overlap 2947976 TTATTATACAAAAAA GCCCAC ATTTAC GTGGGC TTATCCTATTTTATG Dhaf_2747 2948171 - 2948034 - | hypothetical protein TERM 4184 2948350 - 2948306 - R 100 -8.7 -4.8622 | gap 1, overlap 2948336 CGGCTCAATTAAAAA GGGAGCATCGTC-ACTACTT ATACTG AAGTAGTTGGCGACACCCCC AACCAAGCGGTAGAT Dhaf_2748 2948819 - 2948370 - | thioesterase superfamily protein TERM 4185 2948878 - 2948905 + r 83 -9.2 -3.99592 | TTTACAACGCTTAGG GGCTTTTCTGAG TTTT TTCAGAACAGCC TTTCTCATCCTGGCT TERM 4186 2948936 - 2948962 + r 100 -18.2 -3.60296 | opp_overlap 2948936 2948942, overlap 2948942 GGGATGTGATGTAAA CAAAAAGCGCCA CCA TGGCGCTTTTTG TTTGCCGTAAAAATA TERM 4187 2948962 - 2948936 - R 100 -18.2 -3.65902 | opp_overlap 2948936 2948942, overlap 2948942 GGGATGTGATGTAAA CAAAAAGCGCCA CCA TGGCGCTTTTTG TTTGCCGTAAAAATA TERM 4188 2948956 - 2948942 - R 100 -11.4 -5.30616 | opp_overlap 2948942 2948936, overlap 2948936 TGATGTAAACAAAAA GCGCCA CCA TGGCGC TTTTTGTTTGCCGTA TERM 4189 2948942 - 2948956 + r 100 -11.4 -5.28942 | opp_overlap 2948936 2948942, overlap 2948936 TGATGTAAACAAAAA GCGCCA CCA TGGCGC TTTTTGTTTGCCGTA Dhaf_2749 2949812 - 2949054 - | Methyltransferase type 11 TERM 4190 2949835 - 2949847 + r 80 -4.9 -5.09521 | overlap 2949843 CGCCTTTCGTTCTTT GTTTA TTC TAAAC TTTTTACTTTATTCC Dhaf_2751 2951518 - 2950166 - | transposase IS4 family protein TERM 4191 2950306 - 2950292 - G 75 -5.7 -4.5032 | TAGATTAAGAACAAA CGTCA TTAAC TGACG TAGTGCTGTTTTCAA TERM 4192 2952408 - 2952383 - R 100 -11.3 -5.41746 | opp_overlap 2952382 2952381 2952385 AATTGGGTAAAAAAA TAGACACCTCA TTTT TGAAGTGTCTA CCTTTTACATATTAG Dhaf_2752 2953891 - 2952443 - | Peptidase M23 Dhaf_2753 2953984 - 2954157 + | protein of unknown function DUF896 TERM 4193 2954246 - 2954196 - f 72 -7.1 -3.96148 | CCGGCGTATGATAAA TCCTCAAGCAAGCATACTAAT TCTAAACAC ATGATTATGCTTTCTTGAGGA GGGATTGTCTTTGCC Dhaf_2754 2954257 - 2954520 + | hypothetical protein TERM 4194 2954614 - 2954560 - T 74 -9.3 -3.25823 | gap 1, opp_overlap 2954563, overlap 2954563 GCCTTTCCAGATCAA CGATGCTCCCTCCAGGTCAGCTGTTT GACA AAGCAGCGG-CCTTGAGGGAGCATTT GTATAGATTGCCTGA TERM 4195 2954611 - 2954563 - T 100 -15.4 -2.81547 | gap 1, opp_overlap 2954563, overlap 2954560 TTTCCAGATCAACGA TGCTCCCTCCAGGTCAGCTGTTT GACA AAGCAGCGG-CCTTGAGGGAGCA TTTGTATAGATTGCC TERM 4196 2954563 - 2954611 + T 100 -19.8 -4.09108 | gap 1, opp_overlap 2954560 2954563 TTTCCAGATCAACGA TGCTCCCTCCAGGTCAGCTGTTT GACA AAGCAGC-GGCCTTGAGGGAGCA TTTGTATAGATTGCC Dhaf_2755 2956404 - 2954671 - | pyruvate kinase Dhaf_2756 2957516 - 2956506 - | glyceraldehyde-3-phosphate dehydrogenase, type I Dhaf_2757 2958821 - 2957703 - | hypothetical protein TERM 4197 2958922 - 2958898 - R 100 -12.9 -5.37345 | opp_overlap 2958897 TCGAATGATAAAAAA GAGGGAACAGT TGG ACTGTCCCCCC ATGGTTTACGGATGC TERM 4198 2959181 - 2959215 + r 83 -12.2 -2.90075 | ATGATGGTGATCATG GTCATGACCGTGACCG TGG TGATCGTGGTCATGAC TATGGTTGCAGACAG Dhaf_2758 2959555 - 2959157 - | Dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 4199 2960587 - 2960563 - g 73 -7.8 -4.10161 | overlap 2960564 GAGGATCGTTTAAAA GCCTGGCAGC AGGAA GCTGCCAGAA GAACTCAGGCTTAAG TERM 4200 2960586 - 2960564 - g 74 -11.3 -3.05775 | overlap 2960563 AGGATCGTTTAAAAG CCTGGCAGC AGGAA GCTGCCAGA AGAACTCAGGCTTAA Dhaf_2759 2959723 - 2960601 + | AAA ATPase central domain protein Dhaf_2760 2960616 - 2962022 + | VWA containing CoxE family protein TERM 4201 2962105 - 2962049 - T 95 -13.2 -3.14344 | gap 1, opp_overlap 2962053 2962069, overlap 2962069 CAGCTCTTTTATCAA CGGTCCATTGCTCAGCCAAATTGCCAA CAGG TTGGTAATTTGGCTGAGCAAAGGTT-G TAAAAAAGGGAGCCT TERM 4202 2962053 - 2962102 + T 100 -26.1 -3.28712 | opp_overlap 2962049 2962069, overlap 2962069 TCTTTTATCAACGGT CCATTGCTCAGCCAAATTGCCAA CAGG TTGGTAATTTGGCTGAGCAAAGG TTGTAAAAAAGGGAG TERM 4203 2962113 - 2962164 + T 100 -22.6 -3.1875 | gap 1, opp_overlap 2962113 AAAGGTTGTAAAAAA GGGAGCCTCG-CCAACTGCTTTA AATTACC TAAAGCCGTTGGGCGAGGCTCCC TTACCTTGCACTATC TERM 4204 2962164 - 2962113 - T 100 -24 -5.03747 | gap 1, opp_overlap 2962113 AAAGGTTGTAAAAAA GGGAGCCTCGC-CAACTGCTTTAAA TTA CCTAAAGCCGTTGGGCGAGGCTCCC TTACCTTGCACTATC TERM 4205 2962235 - 2962249 + T 100 -7 -5.77853 | opp_overlap 2962237, overlap 2962237 AGTATGCGTTTAAGG CACGGC GAA GCCGGG TTTTTTTTAACGCTT Dhaf_2761 2963285 - 2962263 - | molybdopterin binding domain protein TERM 4206 2962387 - 2962399 + g 75 -3.3 -5.10461 | overlap 2962388 ATGCGGGTGGCCACC AGGTC AAA GACCG TTTTTCTTGAGTACA TERM 4207 2962880 - 2962864 - G 73 -8.7 -3.85704 | TCATCAATCATCAAA GGAACCA CTC TGGTCCC GGCTATCTTCTGCCC TERM 4208 2963287 - 2963297 + H 74 -4.6 -4.86731 | TTAATCTTCTGCATA GGGG TTC CTCC TTTTCTTTACGGAAG TERM 4209 2963796 - 2963809 + G 73 -2.3 -5.01732 | AAATTTTCCGGATTC TGCAG CCGC CCGCA TTTTTTCCGGAAGTT TERM 4210 2964014 - 2963998 - g 70 -2.2 -4.98531 | CCGGCAAATCAAAAA CATCGC TCTGG GGGATG CTCGTTCCCGGCTGG TERM 4211 2964226 - 2964206 - g 79 -3.3 -5.35222 | AAAATGGAGAAAAAA CAAATCACC ATC AGCGATTTA GAGCAACTGAGGAGC Dhaf_2762 2963567 - 2964271 + | transcriptional regulator, Crp/Fnr family Dhaf_2763 2964872 - 2964276 - | nitrite and sulphite reductase 4Fe-4S region TERM 4212 2964452 - 2964475 + g 75 -5.9 -4.60797 | opp_overlap 2964452 CGCCGAGATGAAGAG TCCATCCCG ATTCCC CGGGGAGGA TTTTATCTGTGGGGC TERM 4213 2964649 - 2964637 - G 75 -5.5 -4.79352 | opp_overlap 2964637 2964638, overlap 2964638 TTAGGCATAAGAAAA CCGGT CAG ACCGA TATCTTTGATTTGGG TERM 4214 2964995 - 2964976 - R 100 -8.6 -5.27938 | AGCGGCAAATAAAAA GCATAGCC ATTT GACTATGC TTAAAATGTCATTTG Dhaf_2764 2965934 - 2965017 - | protein of unknown function DUF6 transmembrane TERM 4215 2966905 - 2966954 + r 74 -6.4 -4.57755 | opp_overlap 2966906 2966912, overlap 2966906 2966912 CAGGAATCCTTTAAA AGCAAAAGCCGGACTCCCTC CTAAGCAGCA GTGGGAATCCGGCTTTTACG TTTTCTCTGATCCAT TERM 4216 2966906 - 2966953 + r 76 -9.9 -3.3393 | opp_overlap 2966906 2966912, overlap 2966905 2966912 AGGAATCCTTTAAAA GCAAAAGCCGGACTCCCTC CTAAGCAGCA GTGGGAATCCGGCTTTTAC GTTTTCTCTGATCCA TERM 4217 2966953 - 2966906 - R 100 -15 -4.11751 | opp_overlap 2966905 2966906 2966912, overlap 2966912 AGGAATCCTTTAAAA GCAAAAGCCGGACTCCCTCC TAAGCAGC AGTGGGAATCCGGCTTTTAC GTTTTCTCTGATCCA TERM 4218 2966912 - 2966947 + r 78 -7.5 -4.46854 | opp_overlap 2966906 2966912, overlap 2966906 2966905 CCTTTAAAAGCAAAA GCCGGACTCCCTC CTAAGCAGCA GTGGGAATCCGGC TTTTACGTTTTCTCT TERM 4219 2966947 - 2966912 - R 100 -10.4 -4.67038 | opp_overlap 2966912 2966906 2966905, overlap 2966906 CCTTTAAAAGCAAAA GCCGGACTCCCTCC TAAGCAGC AGTGGGAATCCGGC TTTTACGTTTTCTCT Dhaf_2766 2968022 - 2967012 - | peptidase M42 family protein Dhaf_2767 2969065 - 2968046 - | peptidase M42 family protein TERM 4220 2968551 - 2968531 - G 74 -11.1 -3.02043 | AATCCCGTTTTAACA GCTGGGCCA GTA TGGCGCAGC CCACCCGATCATCAA Dhaf_2768 2970117 - 2969056 - | peptidase M42 family protein TERM 4221 2969248 - 2969266 + g 71 -6.6 -4.2558 | overlap 2969249 GGCATCTGTGCCGCT GCGTCCCG GAA CGGGATGG TTTTGATAAGGGATA TERM 4222 2969249 - 2969265 + g 73 -10.1 -3.15027 | overlap 2969248 GCATCTGTGCCGCTG CGTCCCG GAA CGGGATG GTTTTGATAAGGGAT Dhaf_2769 2970353 - 2970180 - | hypothetical protein Dhaf_2770 2972283 - 2970880 - | dipeptidase Dhaf_2771 2974385 - 2972367 - | Peptidoglycan glycosyltransferase Dhaf_2772 2975569 - 2974586 - | Rhomboid family protein TERM 4223 2975668 - 2975631 - R 100 -13.5 -4.07568 | gap 1, opp_overlap 2975634 2975636, overlap 2975633 2975636 2975638 GGGGGTTTGTCAAAA TAGTAGAGGAGCAGCGGA AAT TCCGCTGCCCCCCT-CTT TATACCCACTAAAAA TERM 4224 2975666 - 2975633 - R 100 -16.1 -3.63744 | gap 1, opp_overlap 2975634 2975636, overlap 2975631 2975636 2975638 GGGTTTGTCAAAATA GTAGAGGAGCAGCGGA AAT TCCGCTGCCCCCCT-C TTTATACCCACTAAA TERM 4225 2975634 - 2975666 + r 100 -11.9 -3.86897 | opp_overlap 2975633 2975631 2975636 2975638, overlap 2975636 GGTTTGTCAAAATAG TAGAGGAGCAGCGGA AAT TCCGCTGCCCCCCTC TTTATACCCACTAAA TERM 4226 2975636 - 2975664 + r 100 -14.5 -3.5241 | opp_overlap 2975636 2975633 2975631 2975638, overlap 2975634 TTTGTCAAAATAGTA GAGGAGCAGCGGA AAT TCCGCTGCCCCCC TCTTTATACCCACTA TERM 4227 2975664 - 2975636 - R 100 -18.9 -2.93623 | opp_overlap 2975634 2975636, overlap 2975633 2975631 2975638 TTTGTCAAAATAGTA GAGGAGCAGCGGA AAT TCCGCTGCCCCCC TCTTTATACCCACTA TERM 4228 2975662 - 2975638 - R 100 -17.9 -3.01785 | opp_overlap 2975636 2975634, overlap 2975636 2975633 2975631 TGTCAAAATAGTAGA GGAGCAGCGGA AAT TCCGCTGCCCC CCTCTTTATACCCAC Dhaf_2773 2975976 - 2975698 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_2774 2977265 - 2975973 - | Electron-transferring-flavoprotein dehydrogenase Dhaf_2775 2978563 - 2977277 - | Electron transfer flavoprotein alpha/beta-subunit TERM 4229 2977989 - 2977977 - G 71 -10.5 -2.75528 | overlap 2977974 ACGGGGAACATATCA CGGCC CAT GGCCG TAGCACCCATGAGGA TERM 4230 2978286 - 2978308 + g 74 -6.8 -4.31835 | opp_overlap 2978284 2978285, overlap 2978287 ACCCCGCTCCAAACG TCGCCGCCGG GAA CCGGCGCTGC TTTCTTCTCCACCTT TERM 4231 2978287 - 2978307 + g 73 -10.3 -3.18378 | opp_overlap 2978284 2978285, overlap 2978286 CCCCGCTCCAAACGT CGCCGCCGG GAA CCGGCGCTG CTTTCTTCTCCACCT Dhaf_2776 2979396 - 2978563 - | Electron transfer flavoprotein alpha/beta-subunit TERM 4232 2979566 - 2979555 - H 75 -3 -5.12987 | CCAAATAAAAACAAA GATA ATTA TATC ACAAAGGAAATAAAA Dhaf_2777 2979695 - 2982577 + | protein of unknown function UPF0182 TERM 4233 2982586 - 2982609 + T 100 -12.5 -4.36127 | opp_overlap 2982586 CCCATGATTGCCAAA GGCGGAAGA TGTTAT TCTTCCGCC TTTTAGCTTATTGCA TERM 4234 2982609 - 2982586 - T 100 -12.5 -3.58343 | opp_overlap 2982586 CCCATGATTGCCAAA GGCGGAAGA TGTTAT TCTTCCGCC TTTTAGCTTATTGCA Dhaf_2778 2983870 - 2982617 - | hypothetical protein TERM 4235 2983174 - 2983151 - G 71 -8.2 -3.62096 | TTCCATCAGCTGAAA CTTCCCATTG TTCT CAATGGCAAG GTAGAGCAGGTTGGT TERM 4236 2983205 - 2983193 - G 71 -9.1 -3.54741 | opp_overlap 2983192 2983188 GAGCAGGTTGGTAAA GGTGG ATA CCACC ATCTGCTTGATCTGT Dhaf_2779 2984867 - 2983899 - | hypothetical protein TERM 4237 2985007 - 2984983 - R 78 -9.3 -3.70902 | opp_overlap 2984988 2984990, overlap 2984988 TTCTCGACAGTGAAA GAAAACCCGGC TTC GCCGAGTTTTA TCTCCACGTATCGCA TERM 4238 2985002 - 2984988 - R 100 -9.2 -4.92385 | opp_overlap 2984988 2984990, overlap 2984983 GACAGTGAAAGAAAA CCCGGC TTC GCCGAG TTTTATCTCCACGTA TERM 4239 2984988 - 2985002 + r 76 -7 -4.53303 | opp_overlap 2984983 2984988, overlap 2984990 GACAGTGAAAGAAAA CCCGGC TTC GCCGAG TTTTATCTCCACGTA TERM 4240 2985108 - 2985084 - R 100 -9.3 -4.74706 | opp_overlap 2985087 CTGAACAGCTAAAAA CAAGCCGCAGT TTC AATGCGGCTTA AGTAGAATGCTTATC Dhaf_2780 2985626 - 2985210 - | OsmC family protein TERM 4241 2985319 - 2985344 + g 76 -9.7 -3.72588 | GCCCTAAGCAGTTTT TCCTGGGGTAG GTTA CTGCCCCAGAA TTTAAATGTCAATTC Dhaf_2781 2985814 - 2986818 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 4242 2986812 - 2986849 + T 100 -9.3 -4.70879 | opp_overlap 2986824, overlap 2986815 2986824 ATATGTCAGTCGCCA GATCTAGAAAAAGAGCC GTCA GGCTCTTTTTTTAACTC TTTTTACCCTTTGGA TERM 4243 2986815 - 2986846 + T 71 -9.6 -2.96839 | opp_overlap 2986824, overlap 2986812 2986824 TGTCAGTCGCCAGAT CTAGAAAAAGAGCC GTCA GGCTCTTTTTTTAA CTCTTTTTACCCTTT TERM 4244 2986824 - 2986837 + T 100 -8.1 -5.54264 | opp_overlap 2986824, overlap 2986815 2986812 CCAGATCTAGAAAAA GAGCC GTCA GGCTC TTTTTTTAACTCTTT TERM 4245 2986837 - 2986824 - T 91 -8.1 -4.89852 | opp_overlap 2986824 2986815 2986812 CCAGATCTAGAAAAA GAGCC GTCA GGCTC TTTTTTTAACTCTTT Dhaf_2782 2987405 - 2986869 - | hypothetical protein Dhaf_2783 2988290 - 2987583 - | hypothetical protein TERM 4246 2987770 - 2987760 - G 80 -8.2 -4.35483 | opp_overlap 2987759 GGCCAGGATAAGAAA GGGC AAT GCCC CTCTTAAGCCCGGAA TERM 4247 2988450 - 2988428 - R 100 -11.4 -5.28414 | GAAGAAATAGAAAAA GAGGTACAAA TTT TTTGCACCTC AACAATTTTTTTATA Dhaf_2784 2989165 - 2988599 - | hypothetical protein TERM 4248 2989203 - 2989232 + r 100 -12.3 -4.52669 | opp_overlap 2989203 CTTCTCTATGAAAAA GTATGCATGTCCT GAAG AAGACATGCATAC TTTCTTTAACTTATT TERM 4249 2989232 - 2989203 - R 100 -14.5 -4.72272 | opp_overlap 2989203 CTTCTCTATGAAAAA GTATGCATGTCCT GAAG AAGACATGCATAC TTTCTTTAACTTATT Dhaf_2785 2990077 - 2989250 - | IstB domain protein ATP-binding protein TERM 4250 2989872 - 2989850 - G 77 -10.5 -3.45634 | overlap 2989846 ACGGCAATTAAGCAA GCCACGGGC CATGC GCGCGTGGC GGAACAGGTTCTCCA Dhaf_2786 2990896 - 2990120 - | primosome, DnaD subunit TERM 4251 2990873 - 2990857 - G 87 -6.6 -5.09259 | TACCGGAAAAGAAAA GAGCTT GTACA AAGCTC CCAAAAACATTGGCT TERM 4252 2991225 - 2991239 + G 80 -2.8 -5.41143 | overlap 2991225 CAGCATCTGGACCTT GATGAT GAC ATCCTC TTTTTTTCAGCCATG TERM 4253 2991657 - 2991624 - g 75 -7.6 -4.25104 | overlap 2991625 CGGCTGGCAGTAAAA CGCCG-AGAGGAGATC TTAA GAT-TCCTCTCCGGCA TCAGGAAACAAACTG Dhaf_2787 2991102 - 2991692 + | metal dependent phosphohydrolase Dhaf_2788 2993418 - 2991706 - | beta-lactamase domain protein TERM 4254 2992505 - 2992523 + g 71 -10.4 -2.82635 | AAGGGGTGCTCACCC CTTTGGAT CAT ATCCAAAG TCTCCTGATCGAAAT TERM 4255 2993326 - 2993295 - G 72 -11 -2.62292 | opp_overlap 2993264, overlap 2993292 2993291 AATCACCATAATTCA GCTCTTTCAAGGCT TTTG AGCCTTGAAAAAGT CCACAATCGATCAGG Dhaf_2789 2994140 - 2993502 - | two component transcriptional regulator, LuxR family TERM 4256 2994034 - 2994001 - G 80 -7.5 -4.59591 | gap 1, overlap 2994002 AATAAAATATCAAAA TCCAAGGTGCG-TGAA ACA TTAATCGCACCTTGGC CGTCTCCTACTTCAC TERM 4257 2994033 - 2994002 - G 78 -11 -3.33315 | gap 1, overlap 2994001 ATAAAATATCAAAAT CCAAGGTGCG-TGAA ACA TTAATCGCACCTTGG CCGTCTCCTACTTCA Dhaf_2790 2995318 - 2994137 - | Sensor DegS domain protein TERM 4258 2994637 - 2994670 + g 100 -11 -4.60924 | TAAGATCCGTGATCT CTGCCCGCACTCGA GTTGGA TCCAGTGCGAGCAG TTTTTCAGCAATTTC TERM 4259 2995066 - 2995093 + g 70 -2 -4.96106 | gap 1, opp_overlap 2995070, overlap 2995070 2995079 CTCTGCTTACTTCCA TTA-AGCGTTGAC GGA GCCGGCGCTCTAA TTTTTGGTATTTATC Dhaf_2791 2996753 - 2995374 - | hypothetical protein TERM 4260 2996325 - 2996313 - G 100 -6.3 -5.53288 | opp_overlap 2996313 CTTAAGTGAAAAAAA GGAAT CCA ATTCC TTCGTTTGTGCTCCC TERM 4261 2997571 - 2997534 - R 100 -17.9 -4.9792 | gap 1, overlap 2997556 CAGCGCACACAAAAA GGAGAGCCCTGCTCACCT TAA ACGTGAG-AGGGCTCTCC CAGGCGTGCCGTTGA Dhaf_2792 2998410 - 2997616 - | dihydropteroate synthase DHPS Dhaf_2793 2999443 - 2998475 - | CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel Dhaf_2794 3000222 - 2999467 - | Cobyrinic acid ac-diamide synthase Dhaf_2795 3002160 - 3000244 - | ferredoxin TERM 4262 3001608 - 3001592 - G 76 -9.5 -3.66654 | TACCCTAATTCTAAA TCCGTTA AAA TAACGGA TAGGTCCCAATGTGC Dhaf_2796 3003517 - 3002195 - | CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel Dhaf_2797 3005771 - 3003591 - | CO dehydrogenase/acetyl-CoA synthase complex, beta subunit TERM 4263 3005701 - 3005711 + g 77 -4 -5.10077 | overlap 3005690 GTGCCATCGTAAGCC TTAC GAA GTAA TTTTTTAGGCTCTTT Dhaf_2798 3007808 - 3005790 - | carbon-monoxide dehydrogenase, catalytic subunit Dhaf_2799 3008638 - 3007871 - | Cobyrinic acid ac-diamide synthase TERM 4264 3008981 - 3008956 - R 100 -15.5 -4.21343 | opp_overlap 3008972 CGCAATATATACAAA GTCTCAGCCCA AGGG CGGGCTGAGAC TAATCACTGTCCATT Dhaf_2800 3009209 - 3009021 - | hypothetical protein Dhaf_2801 3010212 - 3009358 - | degV family protein TERM 4265 3009689 - 3009678 - G 71 -7.2 -4.09739 | GCAAGGTGCCGAAAA GGGC TGAA GCCC CCCCAATTCTCCCTC TERM 4266 3010459 - 3010425 - R 100 -14.4 -4.88918 | opp_overlap 3010425 3010424 3010423, overlap 3010426 CCAGTGCAAAGAAAA CCCGGCAGCTCATTAT CAA AGAATAAGCTGCCGGA ACTTTTTAAATTATT TERM 4267 3010425 - 3010459 + r 71 -10 -2.67579 | opp_overlap 3010425 3010426, overlap 3010424 3010423 CCAGTGCAAAGAAAA CCCGGCAGCTCATTAT CAA AGAATAAGCTGCCGGA ACTTTTTAAATTATT TERM 4268 3010458 - 3010426 - R 100 -15.7 -3.52628 | opp_overlap 3010425 3010424 3010423, overlap 3010425 CAGTGCAAAGAAAAC CCGGCAGCTCATTAT CAA AGAATAAGCTGCCGG AACTTTTTAAATTAT Dhaf_2802 3011423 - 3010470 - | Substrate-binding region of ABC-type glycine betaine transport system Dhaf_2803 3012097 - 3011441 - | binding-protein-dependent transport systems inner membrane component Dhaf_2804 3013226 - 3012087 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 4269 3013262 - 3013320 + H 100 -15.8 -4.1193 | gap 2, opp_overlap 3013264 3013268, overlap 3013264 AGAAAATTTTAACAT -G-ATCAAGGGCAGATGACAACTTATAA AACTC TAGTAAGTTGTCATCTGCCCTTGATTCG TTCTCTTTTTCATAT TERM 4270 3013316 - 3013264 - H 100 -24 -2.77161 | gap 1, opp_overlap 3013262 3013264, overlap 3013268 AAAATTTTAACATGA TCAAGGGCAGATGACAACTTA-TAA AACT CTAGTAAGTTGTCATCTGCCCTTGA TTCGTTCTCTTTTTC TERM 4271 3013264 - 3013316 + H 100 -24.6 -3.64119 | opp_overlap 3013264 3013268, overlap 3013262 AAAATTTTAACATGA TCAAGGGCAGATGACAACTTATAA AACTC TAGTAAGTTGTCATCTGCCCTTGA TTCGTTCTCTTTTTC TERM 4272 3013312 - 3013268 - H 100 -19 -3.27923 | gap 1, opp_overlap 3013264 3013262, overlap 3013264 TTTTAACATGATCAA GGGCAGATGACAACTTA-TAA AACT CTAGTAAGTTGTCATCTGCCC TTGATTCGTTCTCTT TERM 4273 3013377 - 3013354 - H 100 -8.8 -5.00884 | overlap 3013355 ACGCCCCGTAAAAAA CCCCCCGGAC CATT GTCCGAAGGA GTATCAAATACGGTA TERM 4274 3013376 - 3013355 - H 80 -10.1 -3.60048 | overlap 3013354 CGCCCCGTAAAAAAC CCCCCGGAC CATT GTCCGAAGG AGTATCAAATACGGT TERM 4275 3013601 - 3013630 + H 70 -7.9 -3.64236 | opp_overlap 3013608, overlap 3013608 GACCACTACATAGGC GAATAGAGAGTCC TTCG GGGCTCTTTTTTC TTTACGAGTTTAGAT TERM 4276 3013608 - 3013623 + H 100 -6.8 -5.63517 | opp_overlap 3013608, overlap 3013601 ACATAGGCGAATAGA GAGTCC TTCG GGGCTC TTTTTTCTTTACGAG TERM 4277 3014016 - 3013997 - gH 70 -9.2 -2.8005 | overlap 3013996 AAATATATTTCAAAG GCACCGGT TTTC ACCGGGGC GGAACATCAGAAAGC TERM 4278 3014297 - 3014253 - gH 83 -11.6 -2.90763 | gap 1 CGCATATGGCAGATA TTTCGCCTGCAGCGGTGAAAA AACG TCTTCAGCGCGGCAGG-GAAA AATTAAAGCTCAAAT Dhaf_2805 3013847 - 3014365 + | RNA polymerase, sigma-24 subunit, ECF subfamily Dhaf_2806 3014334 - 3015053 + | hypothetical protein TERM 4279 3015110 - 3015132 + F 95 -7.7 -5.08601 | opp_overlap 3015109 3015112, overlap 3015112 GTTCATAGGGCAAAT CAGGCTGAC ATAGC GTCAGCCTA TTTTTGTTGCGATAC TERM 4280 3015130 - 3015112 - f 79 -11 -2.93585 | opp_overlap 3015110 3015112, overlap 3015109 TCATAGGGCAAATCA GGCTGACA TAG CGTCAGCC TATTTTTGTTGCGAT TERM 4281 3015112 - 3015130 + F 91 -10.3 -4.16909 | opp_overlap 3015112 3015109, overlap 3015110 TCATAGGGCAAATCA GGCTGAC ATAGC GTCAGCC TATTTTTGTTGCGAT Dhaf_2807 3015220 - 3015777 + | GCN5-related N-acetyltransferase TERM 4282 3015951 - 3015962 + F 80 -3.6 -5.35815 | GAAGAGGAAATTAAA GTGC TGAT GCGC TTTTTATTTGCTATG TERM 4283 3015987 - 3016008 + F 100 -11.6 -5.38321 | GCTATGGTTTTTAGG CCCCAGAG AATGAA CTCTGGGG TTTTTTATAGTGTTT Dhaf_2808 3016078 - 3017175 + | riboflavin biosynthesis protein RibD Dhaf_2809 3017231 - 3017875 + | riboflavin synthase, alpha subunit TERM 4284 3017855 - 3017866 + F 73 -7.2 -4.09108 | TCCATGAGTTTCTTA GCCG AAAA CGGC TTTATCTAGATTAGA Dhaf_2810 3017903 - 3019111 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4285 3019139 - 3019123 - f 70 -5.2 -4.43844 | opp_overlap 3019123 TTAGTATTTAGAAAA TGCTTA CACTT TAAGCA TACTTGTGATTCACG TERM 4286 3019296 - 3019265 - g 71 -6.4 -4.2704 | gap 1, opp_overlap 3019279, overlap 3019266 TTTATCACCAACAAA CTGGTGGGAGGCGCC CTT GACGCCCTCCTCC-G TCATGGTGTTGCGGA Dhaf_2811 3019178 - 3019642 + | 6,7-dimethyl-8-ribityllumazine synthase Dhaf_2812 3019781 - 3020401 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 4287 3020419 - 3020460 + T 100 -18.9 -3.96681 | opp_overlap 3020419 3020423, overlap 3020423 AATCCAGATCATTAA GAAATCCCCGGAAATGAAC CAAC GAACATTTCCGGGGATTTC TTCTTGCTTTATTGC TERM 4288 3020460 - 3020419 - T 100 -18.9 -3.25491 | opp_overlap 3020419 3020423, overlap 3020423 AATCCAGATCATTAA GAAATCCCCGGAAATGAAC CAAC GAACATTTCCGGGGATTTC TTCTTGCTTTATTGC TERM 4289 3020423 - 3020456 + T 100 -13.9 -4.54404 | opp_overlap 3020419 3020423, overlap 3020419 CAGATCATTAAGAAA TCCCCGGAAATGAAC CAAC GAACATTTCCGGGGA TTTCTTCTTGCTTTA TERM 4290 3020456 - 3020423 - T 100 -13.9 -4.28111 | opp_overlap 3020423 3020419, overlap 3020419 CAGATCATTAAGAAA TCCCCGGAAATGAAC CAAC GAACATTTCCGGGGA TTTCTTCTTGCTTTA Dhaf_2813 3020748 - 3020485 - | hypothetical protein Dhaf_2814 3023431 - 3020837 - | ATP-dependent chaperone ClpB TERM 4291 3021187 - 3021164 - G 75 -5.9 -4.58283 | opp_overlap 3021164, overlap 3021181 CAACCGGTTCAAAAA CTCCGGCCG GAAATG CAGCCTGAG TTCCTCGGTAACCCG TERM 4292 3022229 - 3022258 + g 73 -8.5 -3.85698 | CTCCATACGCATGCG GGCAGCGGCCTCA TCAA TGAGGTCGATGGC TTTATCCGGCAGGAA TERM 4293 3022946 - 3022963 + g 74 -11.3 -2.92463 | ATATTGTTCAAGGGC CCGGAAG GTTC CTTCCGG TGTCTGGCTCGTCAC TERM 4294 3023591 - 3023566 - R 81 -7.5 -4.61231 | overlap 3023582 TTATATGTTGAAAAA CCCCCTAAGCC TAAC AGCCCAGAGGG TAAAAAGATTTCTTA Dhaf_2815 3025352 - 3023625 - | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I TERM 4295 3025405 - 3025384 - R 85 -9.5 -4.19577 | opp_overlap 3025384 TAAGGTGCAAAAGAA GCTCACAGA GCAA TCTGTAAGC TTATCTTACTTGGAA TERM 4296 3025384 - 3025405 + r 70 -7.3 -3.76048 | opp_overlap 3025384 TAAGGTGCAAAAGAA GCTCACAGA GCAA TCTGTAAGC TTATCTTACTTGGAA Dhaf_2816 3026318 - 3025437 - | degV family protein Dhaf_2817 3027025 - 3026441 - | NADPH-dependent FMN reductase TERM 4297 3027120 - 3027092 - R 70 -5.4 -4.53036 | gap 1, opp_overlap 3027092, overlap 3027093 CCATAAATAGTAAAA GCGAGTTGCCT ACTCGATG AGG-AACTCGC TTTACCTGGGTGCAC Dhaf_2818 3027322 - 3027221 - | hypothetical protein Dhaf_2819 3028315 - 3027479 - | GCN5-related N-acetyltransferase TERM 4298 3028062 - 3028039 - G 85 -10.2 -4.09685 | GTTGATCCTCTAAAA GGGGGCGAAA CAGC TGCCGCCCCC TAAACTCCGGATCGA Dhaf_2820 3029343 - 3028339 - | Glyoxylate reductase TERM 4299 3029423 - 3029393 - R 74 -6.1 -4.46404 | gap 1, overlap 3029398 TAATCAAGATCAAAA TCAAAGAGCGTCCC CACA GGGACGCTCAG-GA GAAGCATTGATTAGA TERM 4300 3029419 - 3029398 - R 100 -15.9 -4.26292 | overlap 3029393 AAGATCAAAATCAAA GAGCGTCCC CACA GGGACGCTC AGGAGAAGCATTGAT Dhaf_2821 3029547 - 3029434 - | hypothetical protein Dhaf_2822 3029700 - 3029593 - | hypothetical protein TERM 4301 3029851 - 3029830 - H 100 -11.7 -5.74086 | opp_overlap 3029830 AAAGCAAATAAAAAA CCTTTGATC GCTT GATCAAAGG TTTCGAGTAAATTAT TERM 4302 3029830 - 3029851 + H 90 -11.7 -3.62418 | opp_overlap 3029830 AAAGCAAATAAAAAA CCTTTGATC GCTT GATCAAAGG TTTCGAGTAAATTAT Dhaf_2823 3030277 - 3031029 + | hypothetical protein TERM 4303 3031121 - 3031088 - T 100 -15.5 -3.14344 | opp_overlap 3031093, overlap 3031093 3031107 TACTGGGCGCACCAA GAAAAGGCCTTCGAA AAAC TTCGAAGGTCTTTTC GAATTGAACACTTCA TERM 4304 3031116 - 3031093 - T 100 -9.6 -4.71426 | opp_overlap 3031093, overlap 3031088 3031107 GGCGCACCAAGAAAA GGCCTTCGAA AAAC TTCGAAGGTC TTTTCGAATTGAACA TERM 4305 3031093 - 3031116 + T 100 -11.8 -4.19238 | opp_overlap 3031093 3031088 3031107 GGCGCACCAAGAAAA GGCCTTCGAA AAAC TTCGAAGGTC TTTTCGAATTGAACA Dhaf_2824 3032007 - 3031252 - | transcriptional regulator, MerR family TERM 4306 3031699 - 3031721 + g 76 -2.1 -5.24129 | gap 1, opp_overlap 3031701, overlap 3031699 3031701 GAACTCGTCATTCAA T-ATTCTGTC AACT GACAGGATCA TTTTTTGTAACGCAG TERM 4307 3032017 - 3032029 + H 71 -3.4 -5.00616 | overlap 3032027 TTTCATTGCCTTTTC TCCT TGCTC AGGA TTTTTTCAAAAAACC Dhaf_2825 3032158 - 3033579 + | drug resistance transporter, EmrB/QacA subfamily TERM 4308 3033808 - 3033831 + T 81 -5.2 -5.09762 | overlap 3033830 TCATATAACCTTTTT CAGATGCTTG CGGG CGGGCACCTG TTTTTGTGTTGCCCT TERM 4309 3033921 - 3033877 - T 72 -7.3 -4.02132 | gap 1, opp_overlap 3033878 3033907, overlap 3033878 3033880 TGTTAAAGTCATAAA TCAGTGCCTCTGC-AAGC ACGAGTTTTA GCTTTACAGAGGCACTGT GAGTTCTTAACTTAA TERM 4310 3033920 - 3033878 - T 79 -10.8 -3.00797 | gap 1, opp_overlap 3033878 3033907, overlap 3033877 3033880 GTTAAAGTCATAAAT CAGTGCCTCTGC-AAGC ACGAGTTTTA GCTTTACAGAGGCACTG TGAGTTCTTAACTTA Dhaf_2826 3036172 - 3034193 - | hypothetical protein TERM 4311 3034293 - 3034337 + g 75 -8.1 -4.1822 | opp_overlap 3034293 ACAATTTCTTCAAAA TCCAAGTGATGGTTTTTTTCG CTG TGAAAAAATATATCATTTGGA TTTCTTGAAATGAAC TERM 4312 3034495 - 3034505 + g 76 -2.4 -5.18371 | TTATTGCAAACTTAT AGGC AGT GCCC TTTTCTTTTATCCAC TERM 4313 3036892 - 3036866 - R 100 -12.4 -5.07652 | overlap 3036861 TTTTGCAAAAGAAAA GACGTGAAAGCA TCA TCCTTTCACGTC AAAGCATATTTCAAC TERM 4314 3037298 - 3037254 - R 100 -12.4 -4.80167 | gap 1 TACCAAAAAGTAAAA TAACCAAACGATTCCCA-GCC GCTT AGCTTGGAAACCGTTTGGTCA AATTGATCAGGGAAA Dhaf_2827 3037710 - 3037318 - | Peptidoglycan-binding LysM TERM 4315 3037880 - 3037863 - H 73 -9.1 -3.53224 | TATTTTTGCTTGAAA CATGCCC CCAA GGGCACG ATATACCATAGAATG TERM 4316 3038060 - 3038079 + H 87 -5 -5.4833 | gap 1, opp_overlap 3038060, overlap 3038062 GGTGTGAGGCATAAG TGCACC-CC TGC GGAGGTGTA TTTTTTATTGCCTAA Dhaf_2828 3038117 - 3039142 + | protein of unknown function DUF534 Dhaf_2829 3039186 - 3040115 + | inner-membrane translocator Dhaf_2830 3040090 - 3040893 + | ABC transporter related TERM 4317 3040931 - 3040964 + F 100 -16.1 -5.45652 | GCTAACACACCTCTT TCCCGATGATGCGTG GGGA CACGCGTTGTCGGGA TTTTTTATTGGGGCT TERM 4318 3041116 - 3041140 + F 100 -13.7 -3.88787 | TCCTGCTCAATGGCC GGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCGTGTGC Dhaf_2831 3041551 - 3042960 + | RNA-directed DNA polymerase (Reverse transcriptase) TERM 4319 3043613 - 3043591 - T 77 -10.6 -3.17763 | opp_overlap 3043595 3043596, overlap 3043595 GTGAGATCCGATGAA GAAAGCCTCC AGT GGAGGGTTTC AGGAGCTCACGCCCG TERM 4320 3043609 - 3043595 - T 70 -5.6 -4.25056 | opp_overlap 3043595 3043596, overlap 3043591 GATCCGATGAAGAAA GCCTCC AGT GGAGGG TTTCAGGAGCTCACG Dhaf_2832 3047855 - 3043677 - | recombination helicase AddA TERM 4321 3047662 - 3047672 + g 71 -8.2 -3.73775 | overlap 3047647 CGTTCCCGCATTTCT GCGG CGG CCGC TTTCGTAAAGGTCAC Dhaf_2833 3051504 - 3047848 - | ATP-dependent nuclease subunit B TERM 4322 3049203 - 3049228 + g 70 -9.7 -3.2281 | gap 1, opp_overlap 3049217 3049218, overlap 3049198 3049221 GGCGTTTGCCGTAGA GCTG-CCTGGCC AAA GGCTGGGGCAGC TTCCCTTCCTCGTTT TERM 4323 3051324 - 3051310 - G 79 -10 -3.794 | overlap 3051311 GCCCAAGCGACGAAA GCTCAG AAC CTGAGC TCTGAGAATTCCACC Dhaf_2834 3051630 - 3052214 + | hypothetical protein Dhaf_2835 3052232 - 3052555 + | hypothetical protein Dhaf_2836 3053422 - 3052577 - | protein of unknown function DUF161 TERM 4324 3052639 - 3052664 + g 76 -9.7 -3.70902 | CGATAATAAACGACT GCGGATCTTCC TCCC GGACGATTCGC TTTAAATGTCCCAGC TERM 4325 3052923 - 3052897 - G 95 -12.4 -3.99228 | ATACTAAGGTATAAA GGGCCATTTTAG GGC CCAAAATAGCCC AGGAAGCGATAATCA TERM 4326 3053597 - 3053583 - R 82 -7 -4.88918 | opp_overlap 3053585, overlap 3053585 TTATGGTAAAGAAAA CCCGGC TTC GCCGTG CCTTAAACGCATGCT TERM 4327 3053734 - 3053697 - R 89 -6.2 -5.31519 | opp_overlap 3053697 ACAGTGAAATAAAAA GCAGAAGCCCCGGCCA GCAATG TGAACCGGGTTTCTGC TTTCAGACAGAAAAG TERM 4328 3053876 - 3053843 - R 91 -10.5 -4.08216 | opp_overlap 3053847 3053849 3053865, overlap 3053849 CCATCCTCTCTAAAA CAAAAAGCTTACGCA CCTA TACGTAAGCTCTTTA CATTGATCCATGTTA TERM 4329 3053870 - 3053849 - R 100 -9.5 -5.45802 | opp_overlap 3053849 3053847 3053865, overlap 3053843 TCTCTAAAACAAAAA GCTTACGCA CCTA TACGTAAGC TCTTTACATTGATCC Dhaf_2837 3055208 - 3053889 - | hypothetical protein Dhaf_2838 3055714 - 3055205 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 4330 3055837 - 3055811 - R 100 -8.8 -4.72007 | overlap 3055815 CCCCACTAAAAGAAA GAAATCCTGCCT ATA AGACAGAATTCC AGCAATGGTCTGTAA TERM 4331 3055833 - 3055815 - R 78 -6 -4.88786 | overlap 3055811 ACTAAAAGAAAGAAA TCCTGCCT ATA AGACAGAA TTCCAGCAATGGTCT Dhaf_2839 3057305 - 3055869 - | phospholipase D/Transphosphatidylase TERM 4332 3056941 - 3056902 - G 79 -10.8 -3.53444 | gap 1, opp_overlap 3056910 TGAGCTTTTTCTAAA TCCTCAAGCAGAGCCGCAA ATT TTGCGTCTCCG-TTGTGGA GAAGGGTAAGGGAAT TERM 4333 3057182 - 3057222 + g 75 -7.6 -4.30995 | gap 1, opp_overlap 3057193, overlap 3057180 3057184 3057185 CCAGCAGAGGATTGA GGG-CCAGAAAAGACAGCC AGGC GGCGGTCTTTTCCGGATTC TTCTTTTCTAAGCAA TERM 4334 3057184 - 3057219 + g 85 -10.4 -4.26938 | opp_overlap 3057193, overlap 3057182 3057180 3057185 AGCAGAGGATTGAGG GCCAGAAAAGACAGCC AGGC GGCGGTCTTTTCCGGA TTCTTCTTTTCTAAG TERM 4335 3057185 - 3057218 + g 90 -13.9 -3.15078 | opp_overlap 3057193, overlap 3057184 3057182 3057180 GCAGAGGATTGAGGG CCAGAAAAGACAGCC AGGC GGCGGTCTTTTCCGG ATTCTTCTTTTCTAA TERM 4336 3057210 - 3057193 - G 74 -6.9 -4.38712 | opp_overlap 3057185 3057184 3057182 3057180 TTGAGGGCCAGAAAA GACAGCC AGGC GGCGGTC TTTTCCGGATTCTTC TERM 4337 3057360 - 3057380 + r 100 -11.2 -4.62872 | opp_overlap 3057360, overlap 3057379 GTATGACAAAAAAAA GCAGCTTC AATGC GAAGCTGC TTTTTAAAGCTTAAT TERM 4338 3057380 - 3057360 - R 100 -11.9 -5.9873 | opp_overlap 3057360 3057379 GTATGACAAAAAAAA GCAGCTTCA ATG CGAAGCTGC TTTTTAAAGCTTAAT Dhaf_2840 3057933 - 3057391 - | Chromate transporter Dhaf_2841 3058473 - 3057952 - | Chromate transporter TERM 4339 3058054 - 3058030 - G 72 -10.7 -2.7204 | overlap 3058026 3058027 CAACTTATAAAGGCA GATCATGGCCG CAC CGGCTATGACC CAGCTCCACATGCTT TERM 4340 3058606 - 3058561 - R 100 -9.1 -5.1971 | opp_overlap 3058561 3058562, overlap 3058562 ATCAAAAAGGAAAAA GGGCTGTTGTACAAATGAACC CTAA AGTTCCTTGATACAACAGCCT CTTCTGGTCGCCTTA TERM 4341 3058562 - 3058605 + r 76 -9.7 -3.28219 | opp_overlap 3058561 3058562, overlap 3058561 TCAAAAAGGAAAAAG GGCTGTTGTACAAATGAAC CCTAAA GTTCCTTGATACAACAGCC TCTTCTGGTCGCCTT TERM 4342 3058605 - 3058562 - R 100 -12.6 -3.69386 | opp_overlap 3058562 3058561, overlap 3058561 TCAAAAAGGAAAAAG GGCTGTTGTACAAATGAACC CTAA AGTTCCTTGATACAACAGCC TCTTCTGGTCGCCTT Dhaf_2842 3059181 - 3058672 - | hypothetical protein TERM 4343 3059268 - 3059282 + H 71 -5 -4.70583 | TATTTAGCATTGAAC GTTTTG CAC CGAAAC TTTTCTCTTGCTCCC Dhaf_2843 3059352 - 3059558 + | phage shock protein C, PspC TERM 4344 3059571 - 3059601 + F 100 -13.5 -4.85782 | gap 1 TGATTCGGTTTCGAA TGCCCTCTTG-ATG CAAA CATTCAAGAGGGCA TTTCTTTTTGGCAAA Dhaf_2844 3059710 - 3060015 + | hypothetical protein Dhaf_2846 3060860 - 3060462 - | hypothetical protein Dhaf_2847 3060944 - 3061819 + | hypothetical protein TERM 4345 3061962 - 3061911 - T 100 -30 -3.7956 | opp_overlap 3061924, overlap 3061924 TAAAGAAGGTAATAA TGCAAAGTAAAAAGCAACTCCGTC TAAA GACAGAGTTGCTTTTTACTTTGCA AAGGAAGTGCCCACC TERM 4346 3061924 - 3061949 + T 100 -11.9 -4.98531 | opp_overlap 3061924 3061911 AATGCAAAGTAAAAA GCAACTCCGTC TAAA GACAGAGTTGC TTTTTACTTTGCAAA TERM 4347 3061949 - 3061924 - T 100 -14.1 -5.01042 | opp_overlap 3061924, overlap 3061911 AATGCAAAGTAAAAA GCAACTCCGTC TAAA GACAGAGTTGC TTTTTACTTTGCAAA Dhaf_2848 3063811 - 3061991 - | ABC transporter related TERM 4348 3062161 - 3062175 + g 100 -11.4 -4.86731 | CAATAGCGATGGTAC TGCGCC CTT GGCGCA TTTTGTTTAAGGCGG Dhaf_2849 3065595 - 3063808 - | ABC transporter related TERM 4349 3065323 - 3065310 - G 71 -3.8 -4.66264 | opp_overlap 3065301, overlap 3065301 3065311 3065312 TAAAATGCTTAAAAA GCTG TTGGCG CAGC AACCGGCTTAAGCGG TERM 4350 3065725 - 3065703 - R 86 -7 -5.00642 | opp_overlap 3065703, overlap 3065695 TAATGCATATAAAAA CACCTGCC GTCCATA AGCAGGTG TTTTTCCATTGTTCG TERM 4351 3065703 - 3065725 + r 80 -6.3 -4.8143 | opp_overlap 3065703 3065695 TAATGCATATAAAAA CACCTGC CGTCCATAA GCAGGTG TTTTTCCATTGTTCG Dhaf_2850 3065970 - 3065833 - | hypothetical protein Dhaf_2851 3066117 - 3066419 + | Carboxymuconolactone decarboxylase TERM 4352 3066534 - 3066513 - g 78 -5.1 -4.85599 | gap 1, overlap 3066514 3066516 GGGATGGGATAAAAA CCAGGCCC GCAACAG GGGCC-GG CGCATTCCGGAAAAG TERM 4353 3066687 - 3066703 + G 74 -6.5 -4.32857 | overlap 3066688 TGTATTGGTGATGTA TGTGCTG GGG CAGCACC TTTCTCTTTAGGGCA TERM 4354 3066688 - 3066702 + G 70 -10 -3.19232 | overlap 3066687 GTATTGGTGATGTAT GTGCTG GGG CAGCAC CTTTCTCTTTAGGGC Dhaf_2852 3066424 - 3066714 + | protein of unknown function DUF1294 TERM 4355 3066746 - 3066784 + T 100 -20.4 -4.29829 | opp_overlap 3066746 CATGAATTAGCCAAA GGCGTCCTCCCTTCACTA TAA TAGTGGGGGCAGGACGCC TTTATTAGTGATTAT TERM 4356 3066784 - 3066746 - T 100 -16 -3.72241 | opp_overlap 3066746 CATGAATTAGCCAAA GGCGTCCTCCCTTCACTA TAA TAGTGGGGGCAGGACGCC TTTATTAGTGATTAT Dhaf_2853 3067308 - 3066796 - | GCN5-related N-acetyltransferase Dhaf_2854 3068512 - 3067340 - | protein of unknown function DUF939 Dhaf_2855 3069784 - 3068600 - | peptidase M24 TERM 4357 3069829 - 3069812 - R 100 -8.4 -4.92812 | opp_overlap 3069795 3069793 3069812 CTATAAGAAAATAAA CCCAGG TCGTGC CCTGGG TTAGTATTCTATAGA TERM 4358 3069812 - 3069829 + r 71 -8.4 -3.44443 | opp_overlap 3069812, overlap 3069795 3069793 CTATAAGAAAATAAA CCCAGG TCGTGC CCTGGG TTAGTATTCTATAGA Dhaf_2856 3070675 - 3069893 - | Enoyl-CoA hydratase/isomerase TERM 4359 3070436 - 3070452 + g 74 -6.5 -4.47307 | TAATTGGCTGAACGT CCTTGCT TCC AGCGGGG TTTTCATGTTCATTT Dhaf_2857 3071864 - 3070686 - | acetyl-CoA acetyltransferase TERM 4360 3071231 - 3071242 + g 85 -5.8 -5.03747 | opp_overlap 3071231, overlap 3071238 CCTGACTGAACACCA GAGG CTCT CCTC TTTTTTGGGGAATTT Dhaf_2858 3073260 - 3071920 - | acetyl-CoA hydrolase/transferase TERM 4361 3073289 - 3073306 + r 71 -8.5 -3.56092 | opp_overlap 3073292 3073293, overlap 3073292 TTATTCTCCCTTAGA CAACCAA CTGG TTGGTTG TTTAAACGCTCCTCC Dhaf_2859 3074009 - 3073371 - | hypothetical protein Dhaf_2860 3076175 - 3074076 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 4362 3074820 - 3074832 + g 74 -4.1 -4.85918 | TGGAAAGTAAAGAAT TTCAG CAT CTGGA TTTTCTTCTATAGTC TERM 4363 3075698 - 3075688 - G 71 -4.6 -4.5442 | GCCTGAATGACAAAA CCGG TGA CCAG GATCGTAAGGATAAG TERM 4364 3076243 - 3076268 + r 100 -16.1 -3.28712 | GCTCCTTGATCATGG GGGGTGCTGCC CCAG GGCAGCCCCCC TTCTCCAAACAGGAC Dhaf_2861 3077330 - 3076341 - | Electron transfer flavoprotein alpha/beta-subunit TERM 4365 3076860 - 3076884 + g 78 -12.1 -2.71924 | overlap 3076859 GGATTTAGCTCTTAC CGTGGCCAGGC TGG GCCTGCTCACG ATTTCCACAAAGCTG Dhaf_2862 3078135 - 3077362 - | Electron transfer flavoprotein alpha/beta-subunit Dhaf_2863 3079305 - 3078163 - | acyl-CoA dehydrogenase domain protein Dhaf_2864 3080210 - 3079371 - | 3-hydroxybutyryl-CoA dehydrogenase Dhaf_2865 3081376 - 3080207 - | acyl-CoA dehydrogenase domain protein TERM 4366 3080886 - 3080898 + g 72 -10.5 -3.04144 | opp_overlap 3080884 AGAACTGTATAGATT CCGGC ATA GCCGG TGTTGGAGATAAAGC TERM 4367 3081648 - 3081633 - R 100 -6.8 -5.75822 | opp_overlap 3081633 GAGAAATTAAAAAAA GGCTGG AATT CCAACC TTTTAACTCCCTATG Dhaf_2866 3083837 - 3081726 - | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 4368 3082609 - 3082622 + g 77 -3.1 -5.32944 | TGGGAGGCACGATGT GCTAA GGAT TTGGC TTTTTTCATTCTGGG TERM 4369 3083367 - 3083348 - G 74 -4.2 -4.88405 | overlap 3083349 AAGGGTTAAAGAAAA CGATGCGC CCCT GAGCATCA ATAGCCACCACGGCA TERM 4370 3083967 - 3084009 + r 100 -14.3 -3.42354 | gap 1, opp_overlap 3083969 3083975, overlap 3083969 3083972 3083974 TTATTGGAAATGGGA AAGAAGAA-TCCCGCTGCCG CCCA CGGCAGCGGAAATTCTTCTA TTCTCCCTTCACCTG TERM 4371 3084007 - 3083969 - R 100 -19.1 -3.71917 | gap 1, opp_overlap 3083967 3083969 3083972 3083974, overlap 3083975 ATTGGAAATGGGAAA GAAGAA-TCCCGCTGCCG CCCA CGGCAGCGGAAATTCTTC TATTCTCCCTTCACC TERM 4372 3083969 - 3084007 + r 100 -16.9 -3.281 | gap 1, opp_overlap 3083969 3083975, overlap 3083967 3083972 3083974 ATTGGAAATGGGAAA GAAGAA-TCCCGCTGCCG CCCA CGGCAGCGGAAATTCTTC TATTCTCCCTTCACC TERM 4373 3083972 - 3084004 + r 100 -12.8 -3.77639 | gap 1, opp_overlap 3083969 3083975, overlap 3083969 3083967 3083974 GGAAATGGGAAAGAA GAA-TCCCGCTGCCG CCCA CGGCAGCGGAAATTC TTCTATTCTCCCTTC TERM 4374 3083974 - 3084001 + r 90 -11.2 -4.00486 | opp_overlap 3083969 3083975, overlap 3083972 3083969 3083967 AAATGGGAAAGAAGA ATCCCGCTGCCG CCCA CGGCAGCGGAAA TTCTTCTATTCTCCC TERM 4375 3084000 - 3083975 - R 100 -16.9 -4.1023 | opp_overlap 3083974 3083972 3083969 3083967, overlap 3083969 AATGGGAAAGAAGAA TCCCGCTGCCG CCCA CGGCAGCGGAA ATTCTTCTATTCTCC Dhaf_2867 3084274 - 3084035 - | hypothetical protein Dhaf_2868 3084554 - 3084327 - | protein of unknown function DUF1659 Dhaf_2869 3085506 - 3084652 - | hypothetical protein TERM 4376 3085618 - 3085587 - R 100 -18.8 -5.36441 | TTTGTACACAAAAAA GCCGTTGTCAGCAG ACAA CAGCTGACAACGGC TTAAAAAGCAAATTA Dhaf_2870 3085968 - 3085717 - | transcriptional regulator, XRE family Dhaf_2871 3086113 - 3086301 + | hypothetical protein TERM 4377 3086320 - 3086282 - T 100 -12.5 -4.4846 | opp_overlap 3086280 3086283, overlap 3086283 CAAGTGAAGAAGAAA CGCATCCCCTGCAAGAT TAAAT ACCTTGTAGGGGATGCT CAATTTAATCCATAT TERM 4378 3086319 - 3086283 - T 100 -16 -3.27992 | opp_overlap 3086283 3086280, overlap 3086282 AAGTGAAGAAGAAAC GCATCCCCTGCAAGAT TAAAT ACCTTGTAGGGGATGC TCAATTTAATCCATA TERM 4379 3086283 - 3086319 + T 100 -16 -2.68279 | opp_overlap 3086282 3086283, overlap 3086280 AAGTGAAGAAGAAAC GCATCCCCTGCAAGAT TAAAT ACCTTGTAGGGGATGC TCAATTTAATCCATA Dhaf_2872 3086721 - 3086410 - | hypothetical protein Dhaf_2873 3087294 - 3086776 - | YnaD Dhaf_2874 3087515 - 3087360 - | truncated transcriptional regulator TERM 4380 3087458 - 3087490 + g 74 -10.7 -2.94293 | gap 1, overlap 3087455 GCGCTTCTACCCGTG GCTCCAGTGG-CTT AAAAGA AAGACCGCTGGAGC TGGTTGTGTTCACCA Dhaf_2875 3087597 - 3087947 + | hypothetical protein TERM 4381 3087995 - 3087956 - T 100 -14.2 -3.20896 | opp_overlap 3087956 3087955 3087990, overlap 3087954 3087952 TAACTAAGTAATACA GCCCGCCTGTAGCCTTCC TTTT GATCGGCCACAGGCAGGC ATTGCTCTATGAAGC Dhaf_2876 3089489 - 3088092 - | peptidase M56 BlaR1 TERM 4382 3088567 - 3088556 - G 74 -4.4 -4.90079 | opp_overlap 3088556 ATGTCAATAACAAAA TAGC GCAG GCTA TGATTACCCCAACTC TERM 4383 3088977 - 3088962 - G 75 -6.2 -4.56597 | opp_overlap 3088950 TTTGGGTTGGAAAAA TCCTAT TAGC ATAGGA GTGCCAATACTTAAA Dhaf_2877 3089868 - 3089491 - | transcriptional repressor, CopY family TERM 4384 3089836 - 3089850 + g 76 -2.1 -5.19212 | gap 1, opp_overlap 3089836 CTTCATGATGTCAAA CT-CCG CGTC CGGTAG TTTTTTCATCGTGCT Dhaf_2878 3091079 - 3090111 - | transcriptional regulator, XRE family TERM 4385 3091284 - 3091240 - H 100 -14 -3.23538 | opp_overlap 3091244 3091248, overlap 3091244 3091248 ATAATCCATGAGGAA CAAAGAAATCGGCAAATT TTATATCGG AATTTGCCAATTTCTTTG AAAAGCCCTGAATGC TERM 4386 3091244 - 3091280 + H 71 -8.2 -3.53444 | opp_overlap 3091240 3091244 3091248, overlap 3091248 TCCATGAGGAACAAA GAAATCGGCAAATTTT ATATC GGAATTTGCCAATTTC TTTGAAAAGCCCTGA TERM 4387 3091280 - 3091244 - H 86 -9 -4.2704 | opp_overlap 3091244 3091248, overlap 3091240 3091248 TCCATGAGGAACAAA GAAATCGGCAAATT TTATATCGG AATTTGCCAATTTC TTTGAAAAGCCCTGA Dhaf_2879 3091432 - 3091899 + | hypothetical protein Dhaf_2880 3092341 - 3092225 - | hypothetical protein Dhaf_2881 3093409 - 3092393 - | beta-lactamase TERM 4388 3093322 - 3093334 + g 71 -4.9 -4.57581 | AGCCATATGCCTCTG CAAAT ATA ATTTG TTTATTATTTGAAAT Dhaf_2882 3093534 - 3093436 - | hypothetical protein TERM 4389 3093550 - 3093521 - G 85 -10.1 -4.11216 | opp_overlap 3093525, overlap 3093525 CGCTCATTTTGAAAA TAAAGCAGGACCA TGTC TGTTCCTGCTTCA CTCAATTTAATTCAC TERM 4390 3093546 - 3093525 - G 83 -8.7 -4.65933 | opp_overlap 3093525, overlap 3093521 CATTTTGAAAATAAA GCAGGACCA TGTC TGTTCCTGC TTCACTCAATTTAAT Dhaf_2883 3093728 - 3093573 - | hypothetical protein Dhaf_2884 3095316 - 3093712 - | diguanylate cyclase TERM 4391 3094391 - 3094416 + g 76 -2.5 -5.31275 | overlap 3094392 ACAATAGCTTCATTC CTGGGCTTGGA GATT TCAAAGCTCAC TTTTTTATGCTCACG TERM 4392 3095348 - 3095362 + r 86 -2.8 -5.83822 | ATAGATGATCCGGAA TGACAC TTT GTATCA TTTTTTTTCAGTCTA TERM 4393 3095497 - 3095470 - R 100 -15 -3.66803 | opp_overlap 3095474, overlap 3095474 TGCCAATATCCTAAA GAAAGCATCCCC GATC GGAGATGCTTTC CCTATATGATCATTC TERM 4394 3095474 - 3095493 + r 72 -7.8 -3.74792 | opp_overlap 3095470 3095474 AATATCCTAAAGAAA GCATCCCC GATC GGAGATGC TTTCCCTATATGATC TERM 4395 3095493 - 3095474 - R 100 -10 -4.4572 | opp_overlap 3095474, overlap 3095470 AATATCCTAAAGAAA GCATCCCC GATC GGAGATGC TTTCCCTATATGATC Dhaf_2885 3096577 - 3095516 - | hypothetical protein Dhaf_2886 3097058 - 3096570 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 4396 3096823 - 3096846 + g 76 -8.2 -4.08546 | opp_overlap 3096819, overlap 3096816 TTTTTGAACCACGAG CTGCTCCAAA AGCT TTTGGAACAG TTTATGGTTACTCGT TERM 4397 3097152 - 3097127 - R 100 -14.9 -5.58209 | TGAAATCGAAAAAAA TTTAGCGTGCT CATG AGCACGCTAAA GGGCAGATTGTATTG Dhaf_2887 3097630 - 3097202 - | hypothetical protein TERM 4398 3097761 - 3097733 - R 87 -4.6 -5.53288 | opp_overlap 3097733, overlap 3097735 TTTAATGTAAAAAAA GGCATACCATCC ACGCG GAATGATATGTC TTTTTGAAGCAATAG Dhaf_2888 3098167 - 3097820 - | Cupin 2 conserved barrel domain protein TERM 4399 3098108 - 3098118 + g 70 -2.4 -4.86621 | GCTTTTGAAAAGCAT CCGC TTG GCGA TTTTTCCTTGGGGCT Dhaf_2889 3100022 - 3098514 - | Carboxypeptidase Taq Dhaf_2890 3100228 - 3100034 - | hypothetical protein TERM 4400 3100091 - 3100115 + g 73 -9.9 -3.30441 | opp_overlap 3100082 AAAAAGGTGGCTGGG CCGGCCCGC GTTCATG GCGAGCCGG TTATCCACAATGATA Dhaf_2891 3100604 - 3100254 - | hypothetical protein Dhaf_2892 3101128 - 3100664 - | Activator of Hsp90 ATPase 1 family protein Dhaf_2893 3102147 - 3101278 - | aldo/keto reductase TERM 4401 3102101 - 3102133 + g 78 -5.4 -5.00765 | overlap 3102103 3102112 AGTTTGGGCAGTTTG GTTCCATCGGGCAG AAGGA CTTCCCGGAGGATC TTTTTCTGATTCATT Dhaf_2894 3103175 - 3102171 - | lipoyltransferase and lipoate-protein ligase TERM 4402 3102965 - 3102935 - G 77 -4.5 -4.84363 | overlap 3102928 CTAAATCATGAAAAA CCGCCCCGCCCCC GGAAA GACGACGGGCCAG TTTTCCTCCATCTTC TERM 4403 3103002 - 3103014 + g 71 -4.1 -4.67942 | AAGGGTACAGCGGCA TTCCT GCC AGGGA TTTTGATTTCTTCCG Dhaf_2895 3104569 - 3103220 - | D-serine ammonia-lyase TERM 4404 3103946 - 3103957 + g 75 -3.6 -5.03747 | opp_overlap 3103930 CTCCACTCCCTTGGA GCGC AAAA GTGC TTTTTTCCACCCTTT TERM 4405 3104047 - 3104067 + g 80 -8.3 -4.46212 | TGCTCAACCCGAGAT TTCCTGTGG AAC CCACAGCAA TTTTATAATGAGACA TERM 4406 3104666 - 3104641 - R 100 -9.1 -5.1356 | gap 1, opp_overlap 3104641 CTTTATTAATAAAAA CAGATCAGGAGC CAG GC-CCTAATCTG TTTCACCGCCAATAT Dhaf_2896 3105556 - 3104699 - | hypothetical protein Dhaf_2897 3106836 - 3105739 - | ribosome small subunit-dependent GTPase A TERM 4407 3105853 - 3105841 - G 73 -10.5 -3.24232 | opp_overlap 3105836, overlap 3105839 3105837 CTTGCGGGAAATATA GCGGG CTT CCCGC TGCAGCTTCTTAAAG TERM 4408 3106499 - 3106532 + g 71 -2.6 -4.83615 | overlap 3106502 3106504 ACAATTTGCTCAGCC G-AGGTTTTTCCGGCA GCTT TGC-GGGAAAACTTGC TTTTTCTGGGCAGTA TERM 4409 3106997 - 3107046 + r 71 -9.9 -2.65298 | gap 1, overlap 3106997 CCTCTCCATCTATTA GGCAGGCTTGGCTTCAGGTGGGTT TCA ATCCCAGCCGAAGGCCAGCC-GCC CTTATCCTCACTGAG TERM 4410 3107046 - 3107068 + r 71 -9.2 -3.04443 | overlap 3106997 CCGAAGGCCAGCCGC CCTTATCCTC ACT GAGGATAAGC TATACTTATTGTACG TERM 4411 3107158 - 3107133 - R 82 -3.2 -5.52384 | overlap 3107134 CCGGTATGAAAAAAA GCGCCCAAGT TTTTAC ACTCAGGCGA TTAATCCCCAATCTT Dhaf_2898 3107797 - 3107210 - | hypothetical protein TERM 4412 3107307 - 3107321 + g 80 -8.5 -4.46656 | opp_overlap 3107307, overlap 3107309 GGATTATCAGACACA GCCGG GAAAA CCGGC TTTTCCTGTTCTACG Dhaf_2899 3108813 - 3107812 - | hypothetical protein Dhaf_2900 3109329 - 3108853 - | protein of unknown function DUF107 Dhaf_2901 3109963 - 3109376 - | Domain of unknown function DUF1836 Dhaf_2902 3110265 - 3111494 + | peptidase M29 aminopeptidase II TERM 4413 3112021 - 3112031 + G 70 -2.4 -4.84359 | CTACCAGATTCATCC CGAC ATC GGCG TTTTTGTAGCAGTGG Dhaf_2903 3111545 - 3112381 + | RNA binding S1 domain protein TERM 4414 3112413 - 3112449 + T 70 -7.3 -3.79874 | gap 1, opp_overlap 3112410 3112413, overlap 3112433 AGCCAAAACAAACAA CGGCAGACGCCTGTCC CTTAGA GGAT-GGTATCTGCCG TTCTCTTATGTCAAA TERM 4415 3112449 - 3112413 - T 73 -5.8 -4.44301 | gap 1, opp_overlap 3112413 3112433, overlap 3112410 AGCCAAAACAAACAA CGGCAGACGCCTGTCCC TTAG AGGAT-GGTATCTGCCG TTCTCTTATGTCAAA Dhaf_2904 3113825 - 3112581 - | protein of unknown function DUF401 TERM 4416 3113554 - 3113576 + g 84 -12.8 -3.09635 | opp_overlap 3113553 TCGCTGCGCAGCAAG GGTTTCATGG CGG CCATGAAGCC TTCGATAATGCCGGT Dhaf_2905 3115342 - 3113885 - | cation transporter TERM 4417 3115092 - 3115082 - G 77 -8.2 -4.23758 | ATCCGAGATCCAAAA GGGC AAA GCCC CGAGCAAAGAGGTCA Dhaf_2906 3116845 - 3115385 - | potassium uptake protein, TrkH family Dhaf_2907 3118199 - 3116847 - | TrkA-N domain protein Dhaf_2908 3118389 - 3118970 + | hypothetical protein TERM 4418 3119354 - 3119342 - g 75 -7.7 -4.17762 | opp_overlap 3119351 TAGGCGCCAAAAGAA GGAAC GAG GTTCC TTACAATGTCCTGCA Dhaf_2909 3119092 - 3120441 + | MATE efflux family protein TERM 4419 3120576 - 3120600 + T 100 -13.7 -3.89822 | TCCTGCCTCATAGCC GGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCTGCATG TERM 4420 3120787 - 3120731 - T 100 -25 -2.65126 | gap 1, opp_overlap 3120741, overlap 3120738 3120741 TAGAAGTCCAAACAT GCAAAA-AGAATCCCCTTGGATTATGG CATT CCATAATCCAAGGGGATTTTCTTTTGC TATCAGATTTCCTGT TERM 4421 3120779 - 3120738 - T 100 -21.9 -4.77986 | opp_overlap 3120741, overlap 3120731 3120741 CCAAACATGCAAAAA GAATCCCCTTGGATTATGG CATT CCATAATCCAAGGGGATTT TCTTTTGCTATCAGA TERM 4422 3120776 - 3120741 - T 100 -23.6 -4.47118 | opp_overlap 3120741, overlap 3120738 3120731 AACATGCAAAAAGAA TCCCCTTGGATTATGG CATT CCATAATCCAAGGGGA TTTTCTTTTGCTATC TERM 4423 3120741 - 3120776 + T 100 -23.6 -5.16132 | opp_overlap 3120738 3120731 3120741 AACATGCAAAAAGAA TCCCCTTGGATTATGG CATT CCATAATCCAAGGGGA TTTTCTTTTGCTATC Dhaf_2910 3122029 - 3120827 - | protein of unknown function DUF162 TERM 4424 3121854 - 3121831 - G 71 -8.2 -3.72324 | gap 1 TAGCCTGAGCAAGAA GTTCCTGCCGC TGA GCGACAG-AAC GGCGTTTGATCTCCC Dhaf_2911 3123045 - 3122026 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 4425 3122727 - 3122741 + g 77 -2.8 -5.26918 | AAGCATAGATCTTCT CAGG GGCGATG CCTG TTTTTTCTACAATGT TERM 4426 3123205 - 3123219 + r 77 -3.6 -5.22312 | opp_overlap 3123205 CCTTTTTTCAACACA TAAAGT ATA GCTTTA TTTTTTAATGTACAT Dhaf_2912 3123995 - 3123234 - | 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase TERM 4427 3124098 - 3124062 - R 100 -13.1 -5.54079 | opp_overlap 3124067, overlap 3124064 TTAAAAATTAAAAAA TAGAAGAGACAGCTCAT CGT ATGAGCCGCCCCTTCTG ACATTTCTCCAATCA TERM 4428 3124096 - 3124064 - R 100 -15.7 -4.37346 | opp_overlap 3124067, overlap 3124062 AAAAATTAAAAAATA GAAGAGACAGCTCAT CGT ATGAGCCGCCCCTTC TGACATTTCTCCAAT Dhaf_2913 3124882 - 3124130 - | ABC transporter related Dhaf_2914 3125943 - 3124879 - | transport system permease protein TERM 4429 3125032 - 3125011 - G 88 -8.7 -4.77036 | CGTTATGATCAAAAA TCCTATGGC AAGA GCCATGGGA AAAATATATCTGTGA Dhaf_2915 3126953 - 3125940 - | transport system permease protein TERM 4430 3126177 - 3126165 - G 73 -3.3 -4.83759 | overlap 3126166 AATTAAACCTAAAAA GGGCA AAT TGCCA ATAACAGCTGCCACA TERM 4431 3126574 - 3126560 - G 95 -4.2 -5.86976 | opp_overlap 3126560 CTACAAAAGAAAAAA TGATGG CAC CCGTCA TTCTCTGCACCAAAG TERM 4432 3126897 - 3126928 + g 100 -14.4 -5.40625 | opp_overlap 3126898 3126899, overlap 3126898 3126899 TTTATTGTGATTATA ACGCTGGGGCTGAG AATT CTCAGCCCCAGCCA TTTTTTGTATGGTAT TERM 4433 3126898 - 3126927 + g 100 -17.9 -3.82748 | opp_overlap 3126898 3126899, overlap 3126897 3126899 TTATTGTGATTATAA CGCTGGGGCTGAG AATT CTCAGCCCCAGCC ATTTTTTGTATGGTA TERM 4434 3126927 - 3126898 - G 100 -17.9 -3.41051 | opp_overlap 3126898 3126897 3126899, overlap 3126899 TTATTGTGATTATAA CGCTGGGGCTGAG AATT CTCAGCCCCAGCC ATTTTTTGTATGGTA TERM 4435 3126899 - 3126926 + g 100 -21.4 -2.88564 | opp_overlap 3126898 3126899, overlap 3126898 3126897 TATTGTGATTATAAC GCTGGGGCTGAG AATT CTCAGCCCCAGC CATTTTTTGTATGGT TERM 4436 3126926 - 3126899 - G 100 -21.4 -2.64416 | opp_overlap 3126899 3126898 3126897, overlap 3126898 TATTGTGATTATAAC GCTGGGGCTGAG AATT CTCAGCCCCAGC CATTTTTTGTATGGT Dhaf_2916 3127986 - 3126973 - | periplasmic binding protein TERM 4437 3128291 - 3128264 - g 100 -12.2 -5.64274 | opp_overlap 3128264 TCATGGACAAAAAAA GAACTATAAACC CACC GGTTTATAGTCC TCATGTAAAAAAAGC Dhaf_2917 3128251 - 3128607 + | transcriptional regulator, AraC family Dhaf_2918 3129302 - 3128604 - | two component transcriptional regulator, winged helix family TERM 4438 3128853 - 3128867 + g 83 -6.4 -4.87318 | opp_overlap 3128853 CTGATGGTTAACAAA GACTCG CCG TGAGTC TTTTTCGATTTTCAG Dhaf_2919 3130788 - 3129563 - | transposase IS116/IS110/IS902 family protein Dhaf_2920 3132839 - 3131400 - | histidine kinase TERM 4439 3131565 - 3131579 + g 74 -2.8 -5.1287 | opp_overlap 3131558 3131565 ATAAAACCGCTCAAA GATCTG AGC CACATC TTTTTTCGGTATCCC TERM 4440 3132799 - 3132773 - G 76 -9.5 -3.64487 | opp_overlap 3132764, overlap 3132757 CCATAGCGCTAATAA CCGTAATCATC ACCGG GAGGATTACGG TTAAAGCATTGGCTG Dhaf_2921 3133601 - 3132849 - | membrane spanning protein Dhaf_2922 3134313 - 3133570 - | ABC transporter related TERM 4441 3134338 - 3134377 + r 79 -8.6 -4.17425 | gap 1, opp_overlap 3134333 3134329 3134342 3134343 3134345, overlap 3134339 3134340 TCCAAATGAAGCCCC TA-AAGGAGCTGCCGGAGT CCC ACTCCGGCAGCTCAAGCTA TTTTGCGCTAATTAT TERM 4442 3134339 - 3134375 + r 78 -9.3 -3.68036 | opp_overlap 3134333 3134329 3134342 3134343 3134345, overlap 3134338 3134340 CCAAATGAAGCCCCT AAAGGAGCTGCCGGAGT CCC ACTCCGGCAGCTCAAGC TATTTTGCGCTAATT TERM 4443 3134340 - 3134374 + r 91 -12.8 -2.80098 | opp_overlap 3134333 3134329 3134342 3134343 3134345, overlap 3134339 3134338 CAAATGAAGCCCCTA AAGGAGCTGCCGGAGT CCC ACTCCGGCAGCTCAAG CTATTTTGCGCTAAT TERM 4444 3134372 - 3134342 - R 100 -19.8 -3.58305 | opp_overlap 3134340 3134339 3134338, overlap 3134333 3134329 3134343 3134345 AATGAAGCCCCTAAA GGAGCTGCCGGAGT CCC ACTCCGGCAGCTCA AGCTATTTTGCGCTA TERM 4445 3134371 - 3134343 - R 100 -23.3 -2.74501 | opp_overlap 3134340 3134339 3134338, overlap 3134333 3134329 3134342 3134345 ATGAAGCCCCTAAAG GAGCTGCCGGAGT CCC ACTCCGGCAGCTC AAGCTATTTTGCGCT TERM 4446 3134369 - 3134345 - R 100 -20.1 -2.9162 | opp_overlap 3134340 3134339 3134338, overlap 3134333 3134329 3134343 3134342 GAAGCCCCTAAAGGA GCTGCCGGAGT CCC ACTCCGGCAGC TCAAGCTATTTTGCG Dhaf_2923 3135636 - 3134389 - | hypothetical protein TERM 4447 3135603 - 3135617 + g 93 -6.4 -5.47846 | opp_overlap 3135603 CGCCTATGGTAAAAC CGGCAA TGA TTGCTG TTTTCTTTTTTAATT TERM 4448 3135795 - 3135779 - R 76 -9.4 -3.48144 | overlap 3135775 AATAATAAAAGCGAA GCCGGA ATGAA TCCGGC TAAATGCTGAAACGA Dhaf_2924 3136859 - 3135795 - | sporulation integral membrane protein YtvI TERM 4449 3136990 - 3137004 + H 73 -2.8 -5.14563 | overlap 3136991 AAGGCAGTCCTGCTT ACCTTA AAC TAAGGA TTTTTTCGTAAAAAG Dhaf_2925 3137029 - 3138351 + | Radical SAM domain protein TERM 4450 3138424 - 3138394 - T 95 -9.2 -4.56093 | gap 1, opp_overlap 3138394 AAGCCAAGCATAAAA GGGCTCTTTGAAA TTTAAC TTTCAA-GAGCCC TTTCTCGTCAACAGG TERM 4451 3138394 - 3138424 + T 83 -9.2 -3.96148 | gap 1, opp_overlap 3138394 AAGCCAAGCATAAAA GGGCTCTTTGAAA TTTAAC TTTCAA-GAGCCC TTTCTCGTCAACAGG Dhaf_2926 3139119 - 3138415 - | cytoplasmic chaperone TorD family protein TERM 4452 3139374 - 3139349 - R 100 -10.5 -5.03145 | opp_overlap 3139349 3139361 TAATTCCGTAAAAAA GCCCCCTATGA CTTC TCATAAGGAGC TTCTAAGAATTACTT Dhaf_2927 3140715 - 3139384 - | DEAD/DEAH box helicase domain protein TERM 4453 3140902 - 3140878 - R 100 -15.9 -4.21142 | ATCGCAACAGAGAAA GGTTGGAAACA GGA TGTTTCCAACC AGCCAATCCGCTCCA Dhaf_2928 3143125 - 3140939 - | ATP-dependent DNA helicase RecQ TERM 4454 3140989 - 3141023 + g 71 -6.5 -4.20084 | gap 2, opp_overlap 3140989, overlap 3140990 TCGCCATCCAATCCA CCT-CGGCCGG-CAAAG CAT CTTTGATCGGCCGCAGC TTTTCCATGCCTACT TERM 4455 3140990 - 3141022 + g 70 -10 -3.11569 | gap 2, opp_overlap 3140989, overlap 3140989 CGCCATCCAATCCAC CT-CGGCCGG-CAAAG CAT CTTTGATCGGCCGCAG CTTTTCCATGCCTAC TERM 4456 3141687 - 3141667 - G 74 -11.2 -3.05384 | opp_overlap 3141657, overlap 3141677 TCCTGCCGCACTTAA CCACAGGA TATTC TCCTGTGG ACAAGCGCAAGTAAT TERM 4457 3142540 - 3142555 + g 73 -7.6 -4.08767 | opp_overlap 3142538 3142540 ACCCCGTTACAAACA CTTGAG GACT CTCAAG TTTTAAAAGACTCAC Dhaf_2929 3143777 - 3143127 - | cobalamin B12-binding domain protein TERM 4458 3143354 - 3143369 + g 77 -4.6 -4.99947 | overlap 3143355 ATAATAAAACACTGA TCCCCA AGAC TGGGGC TTTTGTTTGATTCAC Dhaf_2930 3144549 - 3143770 - | transcriptional regulator, GntR family Dhaf_2931 3144825 - 3144655 - | hypothetical protein Dhaf_2932 3146052 - 3144859 - | hypothetical protein TERM 4459 3146072 - 3146105 + r 82 -7.7 -4.45544 | gap 1, opp_overlap 3146072, overlap 3146060 3146067 CCTCCTTTAAGAAAA GGCTGTTCTATTAT CACGAGT ATAA-AGAACAGCC TTTTGATTGATAACC TERM 4460 3146105 - 3146072 - R 86 -7.7 -4.63218 | gap 1, opp_overlap 3146060 3146067 3146072 CCTCCTTTAAGAAAA GGCTGTTCTATTAT CACGAGT ATAA-AGAACAGCC TTTTGATTGATAACC Dhaf_2933 3150379 - 3146132 - | CoA-substrate-specific enzyme activase TERM 4461 3148438 - 3148460 + g 73 -7 -4.25283 | ATTTATAATCGTACA GGTTAGGAAG TTC CGTCTTAACC TTTTCCTGGCCGGCT TERM 4462 3148478 - 3148490 + g 71 -9.1 -3.54424 | TTCCTGGCCGGCTCC CCGCT CAC AGCGG TTTCCGGAAATGAAA TERM 4463 3149065 - 3149081 + g 75 -5.1 -4.72272 | CCTCATTGAGCATGA TGGAATC GAT GACTCCA TTTTTAATCACCAGG TERM 4464 3150429 - 3150411 - R 89 -6.2 -5.36314 | opp_overlap 3150413 3150415 CAAAACAGTAAAAAA TATATATA CTT TATATATA ATATAACATAATAAT TERM 4465 3150745 - 3150714 - R 100 -10.3 -5.95539 | CCGTAAATAAAAAAA CCAGATAATGCAA ATTTAA CTGCACTATCTGG CTAATGCTTCACCCT Dhaf_2934 3151973 - 3150798 - | Peptidoglycan-binding domain 1 protein Dhaf_2935 3152384 - 3152040 - | hypothetical protein Dhaf_2936 3152911 - 3152495 - | protein of unknown function DUF454 Dhaf_2937 3153294 - 3152956 - | arsenate reductase and related TERM 4466 3153364 - 3153348 - R 83 -11.5 -2.90615 | overlap 3153345 ATTCCTCTCAAATCA CGCCGCC CCA GGCAGCG CTCCTCCTATAAAAT TERM 4467 3153538 - 3153503 - R 100 -7.7 -5.54079 | gap 1, opp_overlap 3153502 TTAAAAATGAAAAAA GCCTTTCCGGATCATG TTCTT CATTACCCG-AAAGGC CTATTCAACGCATCT Dhaf_2938 3154502 - 3153552 - | hypothetical protein TERM 4468 3153946 - 3153923 - G 75 -5.9 -4.57073 | overlap 3153924 GATTGGGTTGAAAAA CTCCCAGGC AATGAA GCCGGGGAA TGGTCATCAAGGAAC Dhaf_2939 3156759 - 3154540 - | histidine kinase Dhaf_2940 3157420 - 3156734 - | two component transcriptional regulator, winged helix family TERM 4469 3157877 - 3157839 - R 100 -29.2 -3.62597 | opp_overlap 3157843 3157849, overlap 3157849 GGTAGCTCTTAATAA GCAAGATAAACCCGGGAG AGA CTCCCGGGTTTATCTTGC TTCAAAAAAACTCAT TERM 4470 3157843 - 3157873 + r 100 -22.8 -3.33696 | opp_overlap 3157839 3157849, overlap 3157849 GCTCTTAATAAGCAA GATAAACCCGGGAG AGA CTCCCGGGTTTATC TTGCTTCAAAAAAAC TERM 4471 3157849 - 3157867 + r 100 -16 -4.2772 | opp_overlap 3157849 3157839, overlap 3157843 AATAAGCAAGATAAA CCCGGGAG AGA CTCCCGGG TTTATCTTGCTTCAA TERM 4472 3157867 - 3157849 - R 100 -16 -4.30231 | opp_overlap 3157843 3157849, overlap 3157839 AATAAGCAAGATAAA CCCGGGAG AGA CTCCCGGG TTTATCTTGCTTCAA Dhaf_2941 3159171 - 3157999 - | amidohydrolase Dhaf_2942 3159590 - 3159183 - | thioesterase superfamily protein TERM 4473 3159492 - 3159506 + g 77 -4.2 -5.06451 | AAACTTGTCCGTAGT GGTGAT CTT AACACC TTTTTTCCCCTGCTC Dhaf_2943 3161299 - 3159605 - | oligoendopeptidase, M3 family TERM 4474 3161225 - 3161254 + g 100 -10.2 -4.59773 | gap 1, opp_overlap 3161233 TGCCCCTTTAAACTG CTCAA-GGAGAGT CTTAA ACTCTCCTTTGAG TTTTTCCAGATCAGG Dhaf_2944 3161968 - 3161348 - | ribonuclease H-related protein TERM 4475 3161478 - 3161489 + g 79 -2.2 -5.38497 | AGCTTGGCATAAGCT TGGG TAAA CTCA TTTTTTGCTTTCCAT Dhaf_2945 3162365 - 3162039 - | hypothetical protein Dhaf_2946 3163411 - 3162470 - | peptidase M50 Dhaf_2947 3165748 - 3163424 - | DEAD_2 domain protein TERM 4476 3163923 - 3163892 - G 74 -9.4 -3.76413 | opp_overlap 3163901 GGTCAAAACCTTAAA TTCGGGATGGGCCT GGAG AAGCCTTTCCCGAA CCCGTTCAAGATACT TERM 4477 3164554 - 3164567 + g 73 -8.1 -4.0825 | overlap 3164532 3164531 CGAGATTCTTCAAGT GGAGG AATT CCTCC TTGTTTAATTGGGCG TERM 4478 3165434 - 3165413 - G 81 -12.3 -3.00164 | opp_overlap 3165411 3165410 CACTATATAAGCATA GCACTGAGC TTGC GCCCAGTGC AAATTGTTATAGGAT TERM 4479 3165462 - 3165481 + g 71 -5 -4.57755 | opp_overlap 3165468 GATTCGTCGATCAAG TCCAAATC CAGG GATGTGGA TTTTATCTCCTCAAT Dhaf_2948 3167054 - 3165765 - | aminotransferase class I and II TERM 4480 3167273 - 3167248 - R 100 -13.3 -3.95435 | overlap 3167243 CTGTGCAAAAGATAA TGACGGCCGCC TTAC GGCAACCGTCA ACCTTAAAAGAGCTC Dhaf_2949 3167624 - 3167277 - | TOPRIM domain protein TERM 4481 3167407 - 3167437 + g 71 -4.7 -4.52857 | overlap 3167409 3167416 TATAAATGATGGATA TTCGGAAGGGCCT GATTG AGGCTTTTGCGGA TTTTCTCTCCGGAAT TERM 4482 3167580 - 3167593 + g 70 -2.3 -4.8622 | TAAAACTTCCTGAAG CCGTT CCTT ATCGG TTTTTCCTTCAACAA Dhaf_2950 3168363 - 3167734 - | Exonuclease RNase T and DNA polymerase III Dhaf_2951 3169691 - 3168468 - | Ste24 endopeptidase TERM 4483 3168836 - 3168848 + g 73 -5.5 -4.59773 | CTAAAAAGAGTCCCC GGGCA ATA TGTCC TTTTTGCCAGTGAGC Dhaf_2952 3170231 - 3169791 - | protein of unknown function DUF606 TERM 4484 3169947 - 3169922 - G 73 -9.7 -3.42574 | TTAACCCTACCAGAA TCTGACCGACA ACAG CGGCGGTCAGA GTTCCCGCTACCCCT TERM 4485 3170352 - 3170330 - R 82 -7 -4.84527 | opp_overlap 3170330 CTTATATAGCAAAAA GCTCGCCT ATGGATA AGGCAAGC TTTTTGGCAGTAAAG TERM 4486 3170330 - 3170352 + r 71 -4.8 -4.59773 | opp_overlap 3170330 CTTATATAGCAAAAA GCTCGCCT ATGGATA AGGCAAGC TTTTTGGCAGTAAAG Dhaf_2953 3170754 - 3170389 - | protein of unknown function DUF1540 TERM 4487 3170871 - 3170847 - R 100 -11.5 -5.50774 | opp_overlap 3170847 TACAACAAACAAAAA GGAAGACTCCT TTT AAGAGCCTTCC TTTTGATCAGTTAAC TERM 4488 3170847 - 3170871 + r 75 -7.1 -4.30978 | opp_overlap 3170847 TACAACAAACAAAAA GGAAGACTCCT TTT AAGAGCCTTCC TTTTGATCAGTTAAC Dhaf_2954 3173529 - 3170905 - | cell divisionFtsK/SpoIIIE TERM 4489 3171021 - 3171011 - G 76 -8.2 -4.04997 | opp_overlap 3171020 AGCAAATCAATCAAA CGGG CAG CCCG GGCATAGCCCAATTT TERM 4490 3171300 - 3171312 + g 77 -6.3 -4.62336 | overlap 3171276 AATAGAGCATATCTC CTCTT CCC AAGAG TTTTTCGGCTCCGGT TERM 4491 3172892 - 3172905 + g 73 -5.2 -4.59773 | overlap 3172881 CGATCAGGCTCCAAG CCGG TAATGT CCGG TTTTTCCCACTGGCG TERM 4492 3173489 - 3173507 + g 83 -2.3 -5.56372 | opp_overlap 3173483 3173490, overlap 3173490 AATACTATAGCAACC ACTTGCC GAACA GGCAGGG TTTTTCTTTTCCTTT TERM 4493 3173657 - 3173628 - R 100 -8.7 -5.65177 | gap 1, opp_overlap 3173627 ATATGTATAAAAAAA CACAGACTCTTCCA CGC CGGAA-AGCCTGTG CTCCTTATATCTATT Dhaf_2955 3174643 - 3173672 - | membrane-bound metal-dependent hydrolase TERM 4494 3174717 - 3174734 + r 90 -4.2 -5.65496 | overlap 3174713 AAAATACATTTTGGG TTTCCT CATTAT AGGAAA TTTTTATTTTTCGTA TERM 4495 3174825 - 3174781 - R 100 -11.6 -4.62783 | gap 1, opp_overlap 3174782, overlap 3174782 3174784 CAGCTAGGTCAAAAA TTACCCCAGTGCCATCCCGAA AAAA TTCAGAACAGCACCGGGG-AA TATTCCTGCACTATG TERM 4496 3174825 - 3174782 - R 100 -13.2 -3.37188 | opp_overlap 3174782, overlap 3174781 3174784 AGCTAGGTCAAAAAT TACCCCAGTGCCATCCCGAA AAAA TTCAGAACAGCACCGGGGAA TATTCCTGCACTATG TERM 4497 3174823 - 3174784 - R 100 -15.8 -3.25166 | opp_overlap 3174782, overlap 3174781 3174782 CTAGGTCAAAAATTA CCCCAGTGCCATCCCGAA AAAA TTCAGAACAGCACCGGGG AATATTCCTGCACTA Dhaf_2956 3175785 - 3174898 - | transport-associated protein Dhaf_2957 3176724 - 3175882 - | PHP domain protein TERM 4498 3176835 - 3176804 - R 78 -5.9 -4.88258 | gap 1, opp_overlap 3176803 3176811 AAAAGCATAATAAAA GGGAC-GGCTTCTC TAAAT AAGAAGTCTGTCCC CCTTGATGTTCTAAT Dhaf_2958 3178499 - 3176913 - | N-acyl-D-amino-acid deacylase Dhaf_2959 3180032 - 3178626 - | permease for cytosine/purines uracil thiamine allantoin Dhaf_2960 3181504 - 3180080 - | dihydropyrimidinase Dhaf_2961 3182773 - 3181586 - | peptidase dimerisation domain protein Dhaf_2962 3183166 - 3182798 - | endoribonuclease L-PSP TERM 4499 3183132 - 3183142 + g 74 -6.8 -4.47259 | opp_overlap 3183122 GAATAGGGACCGATG GCAC CCG GTGC TTTTGCTGTTCTGAT Dhaf_2963 3184392 - 3183190 - | diaminopropionate ammonia-lyase TERM 4500 3183698 - 3183723 + g 82 -5.4 -5.04222 | GCCATAGAACCGACC CCAGCCTGCA AGAAGA TGTGGGTTGG TTTTTCCTTTAATTG TERM 4501 3184225 - 3184240 + g 73 -4.6 -4.74103 | opp_overlap 3184212, overlap 3184212 GACGGTGCCAAGCCC CAGGGC TTGA GCCGTG TTTTTCAATTCCCGC TERM 4502 3184251 - 3184262 + g 73 -2.2 -5.1675 | gap 1, overlap 3184251 CCGTGTTTTTCAATT C-CCG CAG CGGCG TTTTTTGGTAAATGG TERM 4503 3184530 - 3184508 - R 100 -7.8 -5.84381 | opp_overlap 3184508 TCATTAATAAAAAAA TGCAACATAT CAG AAATGTTGCA TTTTACTCAATATTT TERM 4504 3184508 - 3184530 + r 79 -7.8 -4.31412 | opp_overlap 3184508 TCATTAATAAAAAAA TGCAACATAT CAG AAATGTTGCA TTTTACTCAATATTT Dhaf_2964 3186408 - 3184636 - | sigma54 specific transcriptional regulator, Fis family TERM 4505 3185962 - 3185982 + g 79 -11.2 -3.53811 | TGACTCCTTTTCCTT GCGATCGA TCTGT TCGATCGC TTTAGCCGCAATAAA TERM 4506 3186534 - 3186497 - H 100 -21.5 -4.46212 | opp_overlap 3186490 3186487, overlap 3186499 TTTCCCATGACAAAA TCGCTCCACATCTGCAG TATA CTGCAGATGTGGAGCCA ACACAACCTGTCTTC TERM 4507 3186532 - 3186499 - H 100 -24.1 -2.56122 | opp_overlap 3186490 3186487, overlap 3186497 TCCCATGACAAAATC GCTCCACATCTGCAG TATA CTGCAGATGTGGAGC CAACACAACCTGTCT Dhaf_2965 3186722 - 3187123 + | hypothetical protein TERM 4508 3187232 - 3187186 - T 100 -10.2 -5.37865 | opp_overlap 3187185 TCAATAAGTAAAAAA CGGATAGTGAATCCGGTGTT CAACTAC ATCACCAGAAACACTATCCG CTTAGAAAAATGGCT Dhaf_2966 3187981 - 3187253 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Dhaf_2967 3188280 - 3187984 - | hypothetical protein TERM 4509 3188413 - 3188400 - H 74 -4.5 -4.82901 | TTTTGGGCACAAAAA CAGAG TGTG CCCTG ATAAATGCCCACTTT Dhaf_2968 3188514 - 3188891 + | protein of unknown function DUF1696 TERM 4510 3189110 - 3189083 - T 100 -5.6 -5.88565 | gap 1, opp_overlap 3189086, overlap 3189086 CTGACAATAAAAAAA GA-ACCCCGGC TCTAACT GCCAGGGTGTC TGCTCCTGCTGAAAA TERM 4511 3189106 - 3189086 - T 89 -7.5 -4.98468 | opp_overlap 3189086, overlap 3189083 ACAATAAAAAAAGAA CCCCGGC TCTAACT GCCAGGG TGTCTGCTCCTGCTG Dhaf_2969 3190233 - 3189241 - | hypothetical protein TERM 4512 3190559 - 3190542 - R 100 -10.5 -4.91109 | opp_overlap 3190542 GGTGGATTAGAAAAA CCCGCCA CTCA CGGCGGG TTTTCCCATAAACAA TERM 4513 3190542 - 3190559 + r 88 -9.8 -4.13767 | opp_overlap 3190542 GGTGGATTAGAAAAA CCCGCC ACTCAC GGCGGG TTTTCCCATAAACAA TERM 4514 3190663 - 3190643 - R 100 -10.5 -5.93252 | TCGAAAAACAAAAAA TCCCTGCAA ACC TTGCAGAGA GCGGATTTCATATTG TERM 4515 3190878 - 3190901 + r 73 -7.5 -4.07687 | gap 1, opp_overlap 3190878 CGGACTACTTAAAAA GCTCTC-ACC AACTC GGTTGAGAGC TTTTGGGCGGCCCCT TERM 4516 3190901 - 3190878 - R 91 -8.2 -4.68593 | gap 1, opp_overlap 3190878 CGGACTACTTAAAAA GCTCTC-ACCA ACT CGGTTGAGAGC TTTTGGGCGGCCCCT Dhaf_2970 3191042 - 3190917 - | hypothetical protein Dhaf_2971 3192505 - 3191108 - | PAS modulated sigma54 specific transcriptional regulator, Fis family TERM 4517 3192603 - 3192618 + r 80 -2.6 -5.54885 | ATTTTGTAAATACCC TTCTTA AAAT TAGGAA TTTTTTATTAATCTT TERM 4518 3192687 - 3192656 - R 93 -2.2 -6.15536 | opp_overlap 3192661, overlap 3192661 AATTAACAAAAAAAA GAAAACAGCCAGGT AACT ACCTGACTGTTGAT TAAGCGCTATATAAC TERM 4519 3192682 - 3192661 - R 100 -10.9 -5.69976 | opp_overlap 3192661, overlap 3192656 ACAAAAAAAAGAAAA CAGCCAGGT AACT ACCTGACTG TTGATTAAGCGCTAT TERM 4520 3192661 - 3192682 + r 71 -8.7 -3.34522 | opp_overlap 3192661 3192656 ACAAAAAAAAGAAAA CAGCCAGGT AACT ACCTGACTG TTGATTAAGCGCTAT Dhaf_2972 3194729 - 3192708 - | translation elongation factor G TERM 4521 3193692 - 3193706 + g 70 -7.8 -3.93166 | overlap 3193685 ATCTCCCGCCGGGAC GACCTG AAC CGGGTC TTGGTTTTTTCCCCG Dhaf_2973 3195974 - 3194766 - | isoaspartyl dipeptidase Dhaf_2974 3196301 - 3197839 + | stage V sporulation protein B TERM 4522 3197993 - 3198011 + GT 70 -2.3 -4.88918 | TCCAACCCGACTCCG CTGCGTG CTTTT CGCGAAG TTTTGTTTCCGCTCG TERM 4523 3198226 - 3198212 - gT 100 -10 -4.45068 | opp_overlap 3198212 ACTCCGAAGAAGAAA CCTTCC GGT GGAAGG TTTTAGGATTCACGC TERM 4524 3198212 - 3198226 + GT 88 -10 -4.19238 | opp_overlap 3198212 ACTCCGAAGAAGAAA CCTTCC GGT GGAAGG TTTTAGGATTCACGC Dhaf_2975 3197793 - 3198260 + | hypothetical protein Dhaf_2976 3198752 - 3198498 - | hypothetical protein Dhaf_2977 3198873 - 3199097 + | small acid-soluble spore protein alpha/beta type TERM 4525 3199147 - 3199122 - T 100 -14.9 -4.21462 | opp_overlap 3199122 AGCTACCATGGAAAA TAGGAGTACAG TGCG CTGTACTCCTA TTTATTTGGATTCTC TERM 4526 3199122 - 3199147 + T 100 -14.9 -4.51765 | opp_overlap 3199122 AGCTACCATGGAAAA TAGGAGTACAG TGCG CTGTACTCCTA TTTATTTGGATTCTC Dhaf_2978 3199900 - 3199145 - | stationary-phase survival protein SurE TERM 4527 3199594 - 3199613 + g 79 -10 -3.81146 | gap 1, opp_overlap 3199593 3199591 3199589 3199594 CCGAATAAAAGACAT CGGTCCCCA AAT TGGGG-CCG TTATTAATTCCGGAG TERM 4528 3199931 - 3199946 + r 85 -4 -5.45813 | overlap 3199933 CTCAACTTCATAGAT TGCCAT GGTC ATGGTA TTTTCTTTTTTGCTA Dhaf_2979 3200086 - 3199913 - | hypothetical protein Dhaf_2980 3200688 - 3200131 - | GTP cyclohydrolase I Dhaf_2981 3202033 - 3200882 - | Tetratricopeptide TPR_2 repeat protein TERM 4529 3202195 - 3202213 + r 73 -6 -4.42851 | opp_overlap 3202195 AAGATCAGCAAAAAA GCACGT CAGTCCA ACGTGC TTTTGCATTTATTGC TERM 4530 3202213 - 3202195 - R 90 -7.4 -5.2112 | opp_overlap 3202195 AAGATCAGCAAAAAA GCACGTCA GTC CAACGTGC TTTTGCATTTATTGC Dhaf_2982 3202664 - 3202200 - | ferric uptake regulator, Fur family Dhaf_2983 3204756 - 3202819 - | sigma54 specific transcriptional regulator, Fis family Dhaf_2984 3205150 - 3206973 + | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 4531 3207017 - 3207048 + T 100 -17.6 -4.21768 | opp_overlap 3207017 3207024 TGTCAGGTGCACAAA TTAAGAAGGAAAGC CCCG GCTTTCCTTCTTAA TTTTAGAATTACTTA TERM 4532 3207048 - 3207017 - T 100 -17.6 -3.87815 | opp_overlap 3207017, overlap 3207024 TGTCAGGTGCACAAA TTAAGAAGGAAAGC CCCG GCTTTCCTTCTTAA TTTTAGAATTACTTA TERM 4533 3207041 - 3207024 - T 86 -9.9 -3.93401 | opp_overlap 3207017, overlap 3207017 TGCACAAATTAAGAA GGAAAGC CCCG GCTTTCC TTCTTAATTTTAGAA TERM 4534 3207127 - 3207106 - T 75 -5.9 -4.63218 | overlap 3207107 3207109 CTGTTTTTAATAAAA CCACCCATA GGAG TATGGGTAA CCATAGGGCGGTGGC TERM 4535 3207365 - 3207341 - T 100 -9.4 -4.86731 | gap 1 GTTGCCTAAATAAAA GAGGGACGTGT CTGC ACAC-TCCCTC ACTAATGGGCTATTA Dhaf_2985 3207620 - 3207378 - | hypothetical protein Dhaf_2986 3210010 - 3207683 - | peptidase M28 TERM 4536 3210351 - 3210333 - g 74 -6.7 -4.42765 | CGGGAAAAAACTAAA GAGCTGA TCACC TCAGCCC AGAAATCCATCTATG Dhaf_2987 3210168 - 3211217 + | Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein TERM 4537 3211240 - 3211222 - f 73 -6 -4.56775 | opp_overlap 3211232, overlap 3211223 AGCCGGGCTGAAAAA CTCACCAG GAT CTGATGAA AATTCACAGATATAT TERM 4538 3211253 - 3211287 + F 100 -10 -5.00616 | opp_overlap 3211257 3211273, overlap 3211254 3211255 GAAAATTCACAGATA TATACGGCTTCCTCAA AAA TTGAGGAAGCCGCACC TTTTTTCCAGAAGAA TERM 4539 3211254 - 3211286 + F 100 -13.5 -3.60048 | opp_overlap 3211257 3211273, overlap 3211253 3211255 AAAATTCACAGATAT ATACGGCTTCCTCAA AAA TTGAGGAAGCCGCAC CTTTTTTCCAGAAGA TERM 4540 3211255 - 3211285 + F 100 -17 -2.75708 | opp_overlap 3211257 3211273, overlap 3211254 3211253 AAATTCACAGATATA TACGGCTTCCTCAA AAA TTGAGGAAGCCGCA CCTTTTTTCCAGAAG TERM 4541 3211283 - 3211257 - f 100 -19.6 -3.08465 | opp_overlap 3211255 3211254 3211253, overlap 3211273 ATTCACAGATATATA CGGCTTCCTCAA AAA TTGAGGAAGCCG CACCTTTTTTCCAGA Dhaf_2988 3211428 - 3211982 + | hypothetical protein TERM 4542 3212041 - 3212004 - T 100 -15 -4.11938 | gap 1, opp_overlap 3212004 GAAATGAAGCAGAAA TACGACCCTC-CCCCTA AAACA TCGGGGCGAGGGTCGTA TTTTTATAAGCTCTT TERM 4543 3212004 - 3212041 + T 100 -15 -4.87273 | gap 1, opp_overlap 3212004 GAAATGAAGCAGAAA TACGACCCTC-CCCCTA AAACA TCGGGGCGAGGGTCGTA TTTTTATAAGCTCTT TERM 4544 3212091 - 3212112 + T 100 -13.1 -5.44119 | CTACAAGTTCTTCAG TAGCCAGAG ACTA CTCTGGCTA TTTTTTTGAGGTAAA Dhaf_2989 3212763 - 3212110 - | Phosphoglycerate mutase TERM 4545 3212873 - 3212847 - R 100 -10.2 -5.26119 | overlap 3212850 GCCTCAAAAATAAAA CAATGGTAGGGA AAC TCCCTACCATCC CCGCCTTGCCGTAAA TERM 4546 3212870 - 3212850 - R 100 -14.1 -4.70511 | overlap 3212847 TCAAAAATAAAACAA TGGTAGGGA AAC TCCCTACCA TCCCCGCCTTGCCGT Dhaf_2990 3213579 - 3213097 - | hypothetical protein Dhaf_2991 3213761 - 3214129 + | hypothetical protein Dhaf_2992 3214244 - 3214702 + | formylmethanofuran dehydrogenase subunit E region TERM 4547 3214734 - 3214784 + T 100 -17 -4.43309 | opp_overlap 3214737, overlap 3214737 GAAAATAGCTTAAGG AAAGAGGCTGTTGCTTAACGAACG TAC CGTTCATTTTGCAACAGCCTCTTC TTTTCCTTGCGCTTA TERM 4548 3214737 - 3214781 + T 100 -18.7 -4.32402 | opp_overlap 3214737, overlap 3214734 AATAGCTTAAGGAAA GAGGCTGTTGCTTAACGAACG TAC CGTTCATTTTGCAACAGCCTC TTCTTTTCCTTGCGC TERM 4549 3214781 - 3214737 - T 100 -20.9 -3.93026 | opp_overlap 3214734 3214737 AATAGCTTAAGGAAA GAGGCTGTTGCTTAACGAACG TAC CGTTCATTTTGCAACAGCCTC TTCTTTTCCTTGCGC Dhaf_2993 3214997 - 3214797 - | hypothetical protein TERM 4550 3215175 - 3215196 + r 100 -5.8 -5.82388 | overlap 3215174 3215174 GGCAATAGCCCCTTC CCCCATCA GAAAGA TGAGGGGG TTTTTTTTGCGCTTT Dhaf_2994 3217334 - 3215220 - | cell division protein Dhaf_2995 3218378 - 3217407 - | 6-phosphofructokinase Dhaf_2996 3219380 - 3218391 - | Chromosomal replication initiator DnaA domain protein TERM 4551 3219367 - 3219381 + g 74 -4.2 -4.93296 | ATCCGATTAAATTCT GATGAG AGC CACATC TTTTTCTCCTCCTAC TERM 4552 3219440 - 3219473 + r 75 -10.3 -2.88677 | opp_overlap 3219441 3219448, overlap 3219447 3219448 AGAACATTTTACAGA AGGAAAAAGAGGGGG TATT CCCTCTCCTTTTCCA TGTCATGCTTATGTA TERM 4553 3219472 - 3219441 - R 100 -13.8 -3.52079 | opp_overlap 3219440 3219447 3219448, overlap 3219448 GAACATTTTACAGAA GGAAAAAGAGGGGG TATT CCCTCTCCTTTTCC ATGTCATGCTTATGT TERM 4554 3219447 - 3219466 + r 70 -5.6 -4.24948 | opp_overlap 3219441 3219448, overlap 3219440 3219448 TTTACAGAAGGAAAA AGAGGGGG TATT CCCTCTCC TTTTCCATGTCATGC TERM 4555 3219465 - 3219448 - R 86 -6.9 -4.96646 | opp_overlap 3219448 3219447 3219440, overlap 3219441 TTACAGAAGGAAAAA GAGGGGG TATT CCCTCTC CTTTTCCATGTCATG Dhaf_2997 3220005 - 3219496 - | Peptidylprolyl isomerase Dhaf_2998 3220161 - 3221147 + | periplasmic solute binding protein TERM 4556 3221871 - 3221883 + G 80 -9.1 -4.2558 | GTTATCGCTTTTGGT CCTCC TCA GGAGG TTTTGGTCCCGCATA Dhaf_2999 3221208 - 3221963 + | ABC transporter related TERM 4557 3222148 - 3222174 + G 77 -8.8 -4.24413 | AATTTATACATCGCC GGCAATATCTAT ACC ATAGGTCTTGCC TTATTTATTGGTGCG TERM 4558 3222568 - 3222578 + G 77 -8.2 -4.1899 | CTGCTGACTATACCT GCCG CGT CGGC TTTTCAGTGGACTCA Dhaf_3000 3221947 - 3222804 + | ABC-3 protein Dhaf_3001 3222811 - 3223248 + | ferric uptake regulator, Fur family Dhaf_3002 3223873 - 3223256 - | SNARE associated Golgi protein TERM 4559 3223633 - 3223617 - G 71 -5 -4.65747 | overlap 3223619 TAACGCTGAATAAAA GGCCGG CCTCC CCGGAC ACCCACATAATAGGC TERM 4560 3223938 - 3223971 + G 93 -14.1 -3.54543 | gap 1, opp_overlap 3223944 3223945, overlap 3223945 CTGAAGCTGTTTTGC GCAAAAGTCCTGGGGA ATT TCTCCAGGA-TTTTGC TTTACAGCGGTCGCT TERM 4561 3223945 - 3223965 + G 100 -11.9 -4.54727 | opp_overlap 3223945 3223944, overlap 3223938 TGTTTTGCGCAAAAG TCCTGGGGA ATT TCTCCAGGA TTTTGCTTTACAGCG Dhaf_3003 3223917 - 3224360 + | hypothetical protein Dhaf_3004 3225979 - 3224600 - | SpoVR family protein TERM 4562 3224969 - 3224953 - G 79 -10.9 -3.59981 | opp_overlap 3224952 3224951, overlap 3224951 TACGATAATTAAAGA GGTTGAG TTC CTCAACC AGTTCTTGATTGAGA TERM 4563 3225213 - 3225203 - G 71 -6.8 -4.19238 | opp_overlap 3225203 3225202 TCGTGAATGCCAAAA GGTG GCC CACC CTTCATTGATGATTT TERM 4564 3225409 - 3225439 + g 80 -2.6 -5.46657 | gap 1 CTGCATATTCAGTTA GGTGGA-CGGAAA TTTTCT TTTGCGCTCCGCC TTTTTTGTTGGAGTC Dhaf_3005 3227156 - 3226026 - | sporulation protein YhbH TERM 4565 3226671 - 3226682 + g 73 -7.2 -4.17556 | TTTTTTATCAATATT GGCC ATCA GGCC TTTCTTGCGAATATC Dhaf_3006 3229070 - 3227169 - | putative serine protein kinase, PrkA TERM 4566 3228056 - 3228066 + g 74 -6.8 -4.34771 | CCTTAAGATCGCTTT GCTG GAT CAGC TTTTCATAGATTTTA TERM 4567 3229233 - 3229206 - R 85 -4.1 -5.46706 | overlap 3229200 AGGGCAAAATAAAAA CGCCTGCGG CTTTTCAGCT CCACAAGCG TTAATCACAAACTTA Dhaf_3007 3229490 - 3229278 - | hypothetical protein Dhaf_3008 3230171 - 3229638 - | cob(I)alamin adenosyltransferase TERM 4568 3230075 - 3230063 - G 74 -4.1 -4.98857 | overlap 3230065 ACTGAAGGATAAAAA CATGA TAG CCATG CCCCACCGCTCTCAG Dhaf_3009 3230703 - 3230176 - | hypothetical protein Dhaf_3010 3232054 - 3230789 - | TPR repeat-containing protein Dhaf_3011 3232193 - 3232444 + | hypothetical protein TERM 4569 3232473 - 3232486 + F 100 -8.1 -5.38958 | opp_overlap 3232473 ATTAAACTATTAAAA GCACC GGCT GGTGC TTTTTCTTTATCACT TERM 4570 3232486 - 3232473 - f 79 -8.1 -4.39989 | opp_overlap 3232473 ATTAAACTATTAAAA GCACC GGCT GGTGC TTTTTCTTTATCACT Dhaf_3012 3232586 - 3233377 + | polysaccharide deacetylase Dhaf_3013 3234425 - 3233403 - | hypothetical protein TERM 4571 3234093 - 3234083 - G 80 -6.8 -4.67607 | CTTTTAATAAATAAA GCTG AAA CAGC CAGAAGCGATGACCA TERM 4572 3234176 - 3234201 + g 100 -11.9 -5.00884 | TAAGCTTTAGCCATA GTTCCCCTTCG GCAA TGAAGGGGAGC TTTTTTAACCAAGCT TERM 4573 3234292 - 3234267 - G 70 -9.7 -3.10091 | gap 1 AGCGGCAAAATCATA GCGGTCTACCGC ACC GCGGTAGGC-GC CGACATGTTGGAAAT TERM 4574 3234362 - 3234375 + g 74 -3.8 -4.87892 | opp_overlap 3234356 CAGATAGCAGGATTT GCAG AACCCG CTGC TTTCTTTTGTTGCGA Dhaf_3014 3235297 - 3234410 - | protein of unknown function DUF161 TERM 4575 3235450 - 3235431 - R 100 -10 -5.28481 | opp_overlap 3235431 TATGCAATGAAAAAA CGCCGCAA TCCC TTGCGACG TCATTGTAACATATG Dhaf_3015 3236295 - 3235618 - | thymidylate kinase TERM 4576 3236334 - 3236365 + r 79 -8.6 -4.18058 | gap 1, overlap 3236335 3236337 ATTTGGCACCTTAGC CGAAG-GGCCGCCGG AAA TCGGCGGCCCCTGCA TTTTGGAATATGATT TERM 4577 3236335 - 3236364 + r 86 -12.1 -3.10112 | gap 1, overlap 3236334 3236337 TTTGGCACCTTAGCC GAAG-GGCCGCCGG AAA TCGGCGGCCCCTGC ATTTTGGAATATGAT TERM 4578 3236337 - 3236361 + r 100 -14.9 -2.75845 | overlap 3236335 3236334 TGGCACCTTAGCCGA AGGGCCGCCGG AAA TCGGCGGCCCC TGCATTTTGGAATAT Dhaf_3016 3238032 - 3236395 - | extracellular solute-binding protein family 5 TERM 4579 3237908 - 3237925 + g 74 -4.1 -4.84359 | TTAGGGCCAATCTGG GCCACAA GCTG TTTTGGC TTTTTGTCGCCGTCA Dhaf_3017 3239094 - 3238114 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Dhaf_3018 3240094 - 3239087 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 4580 3239241 - 3239231 - G 71 -8.2 -3.73402 | overlap 3239232 ACAGCGGGGAGCAAA CGGG CAA CCCG CCGGCGGATTGAGCA Dhaf_3019 3241153 - 3240110 - | binding-protein-dependent transport systems inner membrane component TERM 4581 3240189 - 3240175 - G 71 -7.2 -3.965 | GGTTAAAACTAAGAA TGATCA GGC TGATCA GCAAAGCCGGCGCCA Dhaf_3020 3242083 - 3241166 - | binding-protein-dependent transport systems inner membrane component TERM 4582 3242486 - 3242457 - R 100 -13.1 -5.0133 | gap 1, opp_overlap 3242460 GAGGGTTGGAAAAAA GCACTCCTA-TCAA TGA TTGAATAGGAGTGC TTCGGACAAAAAGCC Dhaf_3021 3243305 - 3242511 - | sporulation transcriptional activator Spo0A TERM 4583 3242554 - 3242576 + g 70 -2 -4.98857 | overlap 3242555 TTGTCGGCAAGAAGG GCAACAAATT CTG AATTGGTTGG TTTTTGTCGTTCAAT TERM 4584 3243268 - 3243286 + g 81 -6 -4.86293 | TGGCACAAATTACGG TTATCGTC AGC GACGACAA TTTTGATTTTTCTTC TERM 4585 3243646 - 3243632 - R 78 -4.3 -5.17353 | ATACTTATTAAAAAA TGATC TGCAT GATCA TGACATCCAAACATT Dhaf_3022 3244124 - 3243624 - | GCN5-related N-acetyltransferase Dhaf_3023 3244215 - 3244400 + | ferredoxin TERM 4586 3244416 - 3244454 + T 100 -17.5 -4.37067 | opp_overlap 3244421, overlap 3244418 3244419 3244421 TACTACTCTATACTA TCACAGGGGGGCGTATC ACTTC GATACGCCCCCCTGGTA TTTTGCTCATATTTA TERM 4587 3244418 - 3244452 + T 100 -20.1 -3.77413 | opp_overlap 3244421, overlap 3244416 3244419 3244421 CTACTCTATACTATC ACAGGGGGGCGTATC ACTTC GATACGCCCCCCTGG TATTTTGCTCATATT TERM 4588 3244419 - 3244451 + T 100 -23.6 -2.85364 | opp_overlap 3244421, overlap 3244418 3244416 3244421 TACTCTATACTATCA CAGGGGGGCGTATC ACTTC GATACGCCCCCCTG GTATTTTGCTCATAT TERM 4589 3244421 - 3244449 + T 100 -20.4 -2.96723 | opp_overlap 3244421, overlap 3244419 3244418 3244416 CTCTATACTATCACA GGGGGGCGTATC ACTTC GATACGCCCCCC TGGTATTTTGCTCAT TERM 4590 3244449 - 3244421 - T 100 -21.1 -2.84634 | opp_overlap 3244419 3244418 3244416 3244421 CTCTATACTATCACA GGGGGGCGTATCA CTT CGATACGCCCCCC TGGTATTTTGCTCAT Dhaf_3024 3245371 - 3244487 - | nitrite and sulphite reductase 4Fe-4S region Dhaf_3025 3245538 - 3245392 - | hypothetical protein TERM 4591 3245611 - 3245642 + r 84 -11 -3.72989 | opp_overlap 3245610, overlap 3245608 3245608 TGTGACCTACAGCAC TCCTAAGTGTGTTT TTTG AAACACGCTCAGGA TTTACATCTCAGTTT TERM 4592 3245673 - 3245661 - R 70 -7.7 -3.60805 | ACATCTCAGTTTAAA CCGTT CTG AACGG AAATATACTTAGAAA TERM 4593 3245743 - 3245728 - R 100 -7.5 -5.88565 | opp_overlap 3245728 3245725 CTGACAATAAAAAAA CGCGC TCCAAG GCGCG TAAGTTATTGAAGAG Dhaf_3026 3246206 - 3245748 - | hypothetical protein Dhaf_3027 3246762 - 3246412 - | hypothetical protein TERM 4594 3246865 - 3246841 - R 100 -11.5 -5.82388 | AAAGGTGAAAAAAAA GGATACAGAGC AAT ACTCTGTACCC GCATAAGATCAAACA Dhaf_3028 3247441 - 3246914 - | CDP-diacylglycerol/serine O-phosphatidyltransferase TERM 4595 3247402 - 3247386 - G 73 -2.3 -5.08015 | AATCCAAAAAATAAA TTCCCTA AGG TAAAGAA ACTGGGAATCATATC Dhaf_3029 3250381 - 3247592 - | DnaQ family exonuclease/DinG family helicase TERM 4596 3249841 - 3249818 - G 75 -5.9 -4.58283 | opp_overlap 3249819 TAATTCCCGCAAAAA GCCGGCCAC CCGTGC GTTACCGGC AAGGGCAAGGGCTCT TERM 4597 3250978 - 3250958 - g 76 -8.9 -3.83502 | GAGCTGCAGATGAAA CTCCAGGCA GCC TGCCCGGCG AACCTACCGGGACCG Dhaf_3030 3250519 - 3251253 + | hypothetical protein TERM 4598 3251286 - 3251258 - T 100 -12.6 -4.65895 | gap 1, opp_overlap 3251258 3251261 3251264 CGGCCCACTGAAAAA CAAGAAGCTCGCT TGAC AGCG-GCTTCTTG TTGTCTTTATAGATC TERM 4599 3251258 - 3251286 + T 100 -12.6 -3.90766 | gap 1, opp_overlap 3251258, overlap 3251261 3251264 CGGCCCACTGAAAAA CAAGAAGCTCGCT TGAC AGCG-GCTTCTTG TTGTCTTTATAGATC TERM 4600 3251261 - 3251283 + T 77 -8.5 -4.06866 | gap 1, opp_overlap 3251258, overlap 3251258 3251264 CCCACTGAAAAACAA GAAGCTCGCT TGAC AGCG-GCTTC TTGTTGTCTTTATAG Dhaf_3031 3251942 - 3251316 - | hypothetical protein TERM 4601 3251628 - 3251649 + g 75 -5.1 -4.69415 | ATGTTCCGTATCAAG GGGAGTGAT TTGA ATCTCTTCC TTTATTTGTCTTGCT TERM 4602 3252134 - 3252105 - R 74 -9.5 -3.39327 | opp_overlap 3252105 3252110, overlap 3252110 CCCTGATAGGTATAA GAAAAGGAGAT CCTGCTCT ATCTCCTTTTC TGCCTTCAACCTTTT TERM 4603 3252129 - 3252110 - R 70 -3.6 -4.79955 | opp_overlap 3252105 3252110, overlap 3252105 ATAGGTATAAGAAAA GGAGAT CCTGCTCT ATCTCC TTTTCTGCCTTCAAC Dhaf_3032 3252428 - 3252165 - | hypothetical protein Dhaf_3033 3252657 - 3252971 + | hypothetical protein TERM 4604 3253033 - 3253087 + T 100 -16.1 -3.15346 | opp_overlap 3253037 3253042, overlap 3253042 CTAATTTTCAACTCA TGAATATAAGGGCATACAATCAG AATTACGAA CTGATTGTATGCCCTTATACGCA TCTTCCTCAACTCTT TERM 4605 3253083 - 3253037 - T 100 -19.9 -3.21912 | opp_overlap 3253033 3253042, overlap 3253042 TTTTCAACTCATGAA TATAAGGGCATACAATCAG AATTACGAA CTGATTGTATGCCCTTATA CGCATCTTCCTCAAC TERM 4606 3253042 - 3253078 + T 100 -15.4 -3.33315 | opp_overlap 3253042 3253037, overlap 3253033 AACTCATGAATATAA GGGCATACAATCAG AATTACGAA CTGATTGTATGCCC TTATACGCATCTTCC TERM 4607 3253078 - 3253042 - T 100 -15.4 -3.724 | opp_overlap 3253033 3253042, overlap 3253037 AACTCATGAATATAA GGGCATACAATCAG AATTACGAA CTGATTGTATGCCC TTATACGCATCTTCC Dhaf_3034 3253360 - 3253094 - | FlhB domain-containing protein Dhaf_3035 3255387 - 3253357 - | hypothetical protein TERM 4608 3253417 - 3253403 - G 75 -5.7 -4.63218 | TCTCCTTTAAGAAAA CGATG GAATT CATCG GCTGTCTCAAGCGGT TERM 4609 3254096 - 3254110 + g 71 -4.2 -4.75776 | opp_overlap 3254096 TCATTTTGAACACTA CCTGGG GCA TTCAGG TTTTTACCTTCGCTT Dhaf_3036 3255985 - 3255491 - | phosphodiesterase, MJ0936 family TERM 4610 3255911 - 3255895 - G 79 -10.9 -3.61398 | opp_overlap 3255894 3255893 CTCCGGCGTGAATAA TGAGGTC GGC GACCTCA CATTGTTCCCATACC Dhaf_3037 3257228 - 3255963 - | major facilitator superfamily MFS_1 TERM 4611 3256565 - 3256588 + g 82 -5.3 -5.04249 | opp_overlap 3256564 3256567, overlap 3256567 TTATATAGCTCAAAC CATTGAGGA TATCTT TCCTCAAGG TTTCTTTTTTAGGAG TERM 4612 3257288 - 3257273 - R 82 -4.7 -5.38326 | opp_overlap 3257287 TCAATCAAATAAAAA GCATC GCCACA GATGC CCAAGGAGCCTTTTC TERM 4613 3257337 - 3257327 - R 70 -2.6 -5.07486 | opp_overlap 3257327 TATCTTTAACAAAAA TTAT AAC ATAA TTTAAGGTGATACAG TERM 4614 3257420 - 3257401 - R 80 -6.4 -4.89852 | gap 1 TGACAGTGAGAAAAA GGCGCAGCT TTT AGCC-CGCC TTGGAGGGAAATCTA Dhaf_3038 3257804 - 3257433 - | hypothetical protein Dhaf_3039 3257934 - 3258377 + | protein of unknown function DUF606 Dhaf_3040 3258973 - 3258419 - | hypothetical protein Dhaf_3041 3259126 - 3260901 + | excinuclease ABC, C subunit Dhaf_3042 3260891 - 3261046 + | hypothetical protein TERM 4615 3261083 - 3261055 - T 75 -8.4 -3.79747 | gap 1, opp_overlap 3261061, overlap 3261056 3261061 TTATTGACGATTAAA GCCAAATTACCAA CCGG TTGGTAATTTG-C TTCCGATCCGAAAAG TERM 4616 3261061 - 3261078 + T 72 -7.1 -3.91911 | opp_overlap 3261061 3261055 3261056 ACGATTAAAGCCAAA TTACCAA CCGG TTGGTAA TTTGCTTCCGATCCG TERM 4617 3261078 - 3261061 - T 70 -7.1 -3.87551 | opp_overlap 3261061, overlap 3261055 3261056 ACGATTAAAGCCAAA TTACCAA CCGG TTGGTAA TTTGCTTCCGATCCG TERM 4618 3261193 - 3261150 - T 100 -17.8 -4.70659 | gap 1, opp_overlap 3261150 TGGGAGAGCTAAAAA GGAGTATCA-CTCACTGCTTT AAA AAAGCAATGAGGCGATACTCC TTCAGTATATTCCCC TERM 4619 3261150 - 3261193 + T 100 -13.4 -3.19175 | gap 1, opp_overlap 3261150 TGGGAGAGCTAAAAA GGAGTATCAC-TCACTGCTTT AAA AAAGCAATGAGGCGATACTCC TTCAGTATATTCCCC Dhaf_3043 3262069 - 3261245 - | NLP/P60 protein TERM 4620 3261835 - 3261845 + g 100 -5.4 -5.71983 | CTGCTTCAGGTTGCC GGAT CAC ATCC TTTTTTTCTGCTTGA TERM 4621 3262375 - 3262356 - R 100 -12.2 -5.15526 | opp_overlap 3262355 3262352 AGATAAAAGTAAAAA CACCTCTC TCAC GAGAGGTG CTGCTCTTTGAACCT TERM 4622 3263055 - 3263085 + r 81 -11.3 -2.77013 | opp_overlap 3263055 3263062, overlap 3263062 AAAAAGCAACAAATT CAAAAAAGAGAGC TTTGC GCTCTCTTTTTGG CTTATTAAAACAATA TERM 4623 3263085 - 3263055 - R 79 -11.3 -2.55644 | opp_overlap 3263055 3263062, overlap 3263062 AAAAAGCAACAAATT CAAAAAAGAGAGC TTTGC GCTCTCTTTTTGG CTTATTAAAACAATA TERM 4624 3263078 - 3263062 - R 100 -8 -5.25805 | opp_overlap 3263055 3263062, overlap 3263055 AACAAATTCAAAAAA GAGAGC TTTGC GCTCTC TTTTTGGCTTATTAA TERM 4625 3263062 - 3263078 + r 91 -8 -4.8143 | opp_overlap 3263062 3263055, overlap 3263055 AACAAATTCAAAAAA GAGAGC TTTGC GCTCTC TTTTTGGCTTATTAA Dhaf_3044 3263365 - 3263123 - | hypothetical protein Dhaf_3045 3264014 - 3263415 - | metal dependent phosphohydrolase TERM 4626 3263494 - 3263475 - GR 78 -4.2 -5.1523 | CTCAGAATACAAAAA GAGCGGTT CAAA AAGCGCCC GTGCGGTCTGGGTGT TERM 4627 3263565 - 3263550 - GR 76 -7.6 -4.13767 | overlap 3263534 CCTTTCACGGTAAAA GGATTC ACAG GAATCC GGCCCAAAAAAAGGT Dhaf_3046 3264627 - 3263974 - | GCN5-related N-acetyltransferase Dhaf_3047 3265562 - 3264663 - | sigma54 specific transcriptional regulator, Fis family TERM 4628 3265049 - 3265061 + g 74 -4.1 -4.88918 | AATGCCGGACTAGGG GAAGG ATA TCTTC TTTTCTTTGCCGTAG TERM 4629 3265172 - 3265186 + g 80 -4.3 -5.32599 | TATTTTGGGATGAAC TCAGA AATGC TCTGA TTTTTCTCTTTTCTA TERM 4630 3265720 - 3265692 - R 100 -8.2 -5.38549 | opp_overlap 3265713 TTTAAACAACAAAAA GGTCCTCATGAC TGTTG ATCATCAGGACC TGAATATTGAATTGT Dhaf_3048 3267037 - 3265751 - | adenosylhomocysteinase TERM 4631 3265883 - 3265893 + g 73 -4.6 -4.8048 | GGAGTAAACTTTAGG CTCC AGG GGGG TTTTTGCTGTAGCAA Dhaf_3049 3267913 - 3267068 - | Mrp protein TERM 4632 3268587 - 3268563 - R 100 -13.7 -3.86015 | CACGCTGCGGAGAAA GGTTGGAAACA GGA CGTTTCCAACC CGCCATTGAGCAGGA Dhaf_3050 3270551 - 3268752 - | oligoendopeptidase F TERM 4633 3269118 - 3269140 + g 82 -5.5 -5.10163 | overlap 3269107 3269110 CGCAGTGAGGGCCTC CCCTTGTTC CACCA GAGCATGGG TTTTCTTTTCAAATT TERM 4634 3270133 - 3270148 + g 76 -2.5 -5.29385 | ATATCTTCTAAGGCG TGGTC ATAAAG GGCCA TTTTTTCATTCGCTT TERM 4635 3270672 - 3270636 - H 100 -8.7 -4.89339 | opp_overlap 3270642, overlap 3270637 3270638 3270642 AATGACCTATAAAAA GTGAAACAGGCAGCGTA CGT TCCACTGCCTGTTTCTG CCACCTCGTCCACCT TERM 4636 3270671 - 3270637 - H 91 -12.2 -3.52519 | opp_overlap 3270642, overlap 3270636 3270638 3270642 ATGACCTATAAAAAG TGAAACAGGCAGCGTA CGT TCCACTGCCTGTTTCT GCCACCTCGTCCACC TERM 4637 3270670 - 3270638 - H 100 -15.7 -2.70788 | opp_overlap 3270642, overlap 3270637 3270636 3270642 TGACCTATAAAAAGT GAAACAGGCAGCGTA CGT TCCACTGCCTGTTTC TGCCACCTCGTCCAC TERM 4638 3270642 - 3270666 + H 75 -8.5 -3.87075 | opp_overlap 3270638 3270637 3270636 3270642 CTATAAAAAGTGAAA CAGGCAGCGTA CGT TCCACTGCCTG TTTCTGCCACCTCGT TERM 4639 3270666 - 3270642 - H 90 -10.7 -4.03085 | opp_overlap 3270642, overlap 3270638 3270637 3270636 CTATAAAAAGTGAAA CAGGCAGCGTA CGT TCCACTGCCTG TTTCTGCCACCTCGT TERM 4640 3271073 - 3271109 + H 100 -10.2 -5.95539 | AGGGTGGTACCGCGT GACTTAACTCGTCCCT TATTT GGGGGTGAGGTAAGTC TTTTTTTATTTACAA Dhaf_3051 3271149 - 3272009 + | Prephenate dehydratase Dhaf_3052 3272539 - 3272015 - | hypothetical protein TERM 4641 3272677 - 3272656 - R 100 -9.5 -5.07011 | TAGAGAAAGTAAAAA GGGCTTATC TGGT GATAAACCC CGAAAATGCCAACAA Dhaf_3053 3274208 - 3272724 - | threonine synthase TERM 4642 3274578 - 3274561 - g 75 -5.5 -4.78764 | overlap 3274554 CAAATCGAGGAAAAA CTCCATC ACTG GTTGGAG TCTAAGCCGAAGATC Dhaf_3054 3274375 - 3275763 + | phosphoribulokinase/uridine kinase Dhaf_3055 3276081 - 3275770 - | Excinuclease ABC C subunit domain protein Dhaf_3056 3276844 - 3276089 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase TERM 4643 3276616 - 3276602 - G 73 -8.6 -3.86015 | opp_overlap 3276608, overlap 3276609 GACGGGCTTCAGAAA GATGAC AGG GTCATC ATGAAAATCATGGCC TERM 4644 3277207 - 3277191 - g 78 -8.1 -4.35483 | CTTTATCATAATAAA GCTAAAA ATA TTTTAGC TACCTGCCATATCTT Dhaf_3057 3276942 - 3277568 + | endonuclease III Dhaf_3058 3278663 - 3277605 - | metal dependent phosphohydrolase TERM 4645 3279080 - 3279098 + G 70 -9.6 -3.15073 | opp_overlap 3279080 3279079 3279084, overlap 3279079 3279076 TGCTGATTTATTAAC CAAAGCCG TTC CGGTTTTG ATTCTTTTAGTGGGT Dhaf_3059 3278781 - 3279536 + | protein of unknown function DUF81 TERM 4646 3279555 - 3279573 + T 100 -12.4 -4.614 | opp_overlap 3279555 AACCTAAACATTAAA GCCGCTCA CAA TGGGCGGC TTTTGTATCATTAAC TERM 4647 3279573 - 3279555 - T 89 -10.2 -4.02206 | opp_overlap 3279555 AACCTAAACATTAAA GCCGCTCA CAA TGGGCGGC TTTTGTATCATTAAC Dhaf_3060 3280725 - 3279604 - | VanW family protein TERM 4648 3280441 - 3280425 - G 76 -9.5 -3.63694 | opp_overlap 3280424 3280422 3280420 3280427 AGGCATCCGTAATAA CATTTCC GGT GGAAATG ATGTATTGACTTGCC Dhaf_3061 3281546 - 3280740 - | hypothetical protein Dhaf_3062 3282568 - 3281555 - | hypothetical protein Dhaf_3063 3283997 - 3282636 - | hypothetical protein TERM 4649 3283606 - 3283583 - G 73 -10.4 -3.25719 | overlap 3283576 GCACCAGAGGATGAA TGCCAATTCT CCCC AGAATCGGCA CCACAACTGCGCCTA TERM 4650 3284103 - 3284077 - R 100 -13.1 -5.06816 | opp_overlap 3284074 AGCGGGCAACAAAAA TAGACCGTCCT TTGGG AGGACGGCCTA TGCCTATTTTTTCAG TERM 4651 3284121 - 3284150 + r 71 -2.1 -5.10004 | overlap 3284123 3284146 CCTATTTTTTCAGTT GATAGTTAAGCTT GTGC GGGCTTAACAAAC TTTTTGGTTCTTTTT Dhaf_3064 3284281 - 3284126 - | hypothetical protein TERM 4652 3284471 - 3284454 - R 73 -8.5 -3.59262 | opp_overlap 3284454 TTGTACAGCCTCAAA TTCCCAA ACGT TTGGGAA TTTGAGAAAAAAAGA TERM 4653 3284454 - 3284471 + r 71 -8.5 -3.53012 | opp_overlap 3284454 TTGTACAGCCTCAAA TTCCCAA ACGT TTGGGAA TTTGAGAAAAAAAGA TERM 4654 3284526 - 3284485 - R 100 -11.5 -5.63504 | opp_overlap 3284519 3284521, overlap 3284487 AATTTGAGAAAAAAA GACCGCAGCCCCATGAACC TTAA AGTTCATTGGACAGCGGAC ACAAGGTGTTCCCTA TERM 4655 3284524 - 3284487 - R 100 -12.7 -4.45201 | opp_overlap 3284519 3284521, overlap 3284485 TTTGAGAAAAAAAGA CCGCAGCCCCATGAACC TTAA AGTTCATTGGACAGCGG ACACAAGGTGTTCCC Dhaf_3065 3285136 - 3284504 - | protein of unknown function UPF0029 Dhaf_3066 3285537 - 3285142 - | thioesterase superfamily protein Dhaf_3067 3286351 - 3285632 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4656 3286214 - 3286229 + g 71 -4.6 -4.56597 | overlap 3286216 GCCAGGCTTTGCTTC GACCGT CTGA ACGGCC TTTTTGCGCCAGCCC Dhaf_3068 3287407 - 3286424 - | Asparaginase TERM 4657 3286582 - 3286540 - G 77 -6.9 -4.57073 | overlap 3286541 3286542 GATCTCCGGCAAAAA GTGCC-CCCCGGCGTTGAAGC TCT GCTCCGCCGCCGGGATAGC-C GTAAATAGGAGCAGT TERM 4658 3287660 - 3287644 - g 95 -8.7 -5.30155 | GTACGAATTAAAAAA CCACACC GAA GATGTGG TGCAGCATGTCCTCA Dhaf_3069 3287627 - 3287893 + | putative ComF operon protein Dhaf_3070 3288044 - 3287922 - | hypothetical protein TERM 4659 3288496 - 3288474 - g 88 -12.1 -3.71527 | opp_overlap 3288478, overlap 3288478 GCGGAAGTACTTAAA GAAAGCACC CTCCT GGTGCTTTC CAATCAGGGCATGGT TERM 4660 3288492 - 3288478 - g 76 -7.1 -4.47786 | opp_overlap 3288478, overlap 3288474 AAGTACTTAAAGAAA GCACC CTCCT GGTGC TTTCCAATCAGGGCA Dhaf_3071 3288177 - 3288851 + | transcriptional regulator, Crp/Fnr family Dhaf_3072 3289703 - 3288834 - | hypothetical protein TERM 4661 3289391 - 3289407 + g 71 -6.5 -4.21827 | GTTGAGAAACTTTGC GATCCTG ATG CTGGATC TTTTCCGATGTTTCG Dhaf_3073 3289819 - 3292107 + | DEAD/DEAH box helicase domain protein Dhaf_3074 3292158 - 3292472 + | hypothetical protein TERM 4662 3292858 - 3292841 - g 71 -9.1 -3.60971 | AGGTCAAGTCGGAAA CCGCCAC CATT ATGGCGG AAGAGCAGCGCGCTC TERM 4663 3292948 - 3292913 - g 74 -2.7 -5.1287 | gap 3, overlap 3292915 CCGACATTGAAAAAA TGC-AGTCTTAC-GCGCT CAA AGCGCTGGAAG-CTGGCA ATGAAGCGGATGCCA Dhaf_3075 3292702 - 3293379 + | phage shock protein A, PspA TERM 4664 3293388 - 3293423 + F 100 -10.4 -5.08824 | TAAGTAATTATGGGG GAAGCTGCCTGAGAAG AAAT CATCCGAGGCAGCTTC TTTTTTGCATCACAC TERM 4665 3294242 - 3294224 - g 74 -9.5 -3.45023 | GTATGACTATGACAA CCGGGAG CTGTT CCCCCGG GTGCGCGCCCGAGTG TERM 4666 3294363 - 3294350 - g 89 -3.7 -5.65513 | opp_overlap 3294350, overlap 3294342 3294341 CATTAATGAAAAAAA GGCCG ATTA CGCCC TTTTTCCCGTGTGGA Dhaf_3076 3293499 - 3294560 + | YdjG Dhaf_3077 3294560 - 3295450 + | protein of unknown function DUF477 Dhaf_3078 3295497 - 3296489 + | YdjI TERM 4667 3296469 - 3296494 + F 86 -9.8 -3.91488 | overlap 3296471 AATTTTTGCTCCAAC TGCGGTCAGA AGCTGG TCTGACCGTA TTATTTGGGGGGATT TERM 4668 3296471 - 3296492 + F 80 -10.2 -3.54488 | overlap 3296469 TTTTTGCTCCAACTG CGGTCAGA AGCTGG TCTGACCG TATTATTTGGGGGGA Dhaf_3079 3296650 - 3297717 + | hypothetical protein TERM 4669 3297774 - 3297751 - T 100 -12.6 -4.94222 | AATAACTTAGAAAAA TATGGATGTG TTGT CACATCCATA ATCCAACCGCATAGA TERM 4670 3297878 - 3297893 + T 72 -6.2 -4.30014 | opp_overlap 3297872 3297878 GAAAAGAATTCAAAA TCTTCA TCGA TGAAGA TTTTGCCTTACTCCC TERM 4671 3297893 - 3297878 - T 74 -6.2 -4.41817 | opp_overlap 3297878, overlap 3297872 GAAAAGAATTCAAAA TCTTCA TCGA TGAAGA TTTTGCCTTACTCCC TERM 4672 3297975 - 3297940 - T 86 -11.4 -3.3217 | opp_overlap 3297949, overlap 3297949 GTTTAACCATAAAAT TGCAAAAAACCTGTCA AATG TGACAGGTTTTTTATA CGGGAACATTAATCT TERM 4673 3297966 - 3297949 - T 100 -9.9 -5.15117 | opp_overlap 3297949, overlap 3297940 TAAAATTGCAAAAAA CCTGTCA AATG TGACAGG TTTTTTATACGGGAA TERM 4674 3297949 - 3297966 + T 100 -9.9 -5.24129 | opp_overlap 3297940 3297949 TAAAATTGCAAAAAA CCTGTCA AATG TGACAGG TTTTTTATACGGGAA Dhaf_3080 3298148 - 3297984 - | Rubredoxin-type Fe(Cys)4 protein Dhaf_3081 3298713 - 3298261 - | hypothetical protein Dhaf_3082 3299428 - 3298733 - | Haloacid dehalogenase domain protein hydrolase TERM 4675 3299549 - 3299511 - R 83 -8.9 -4.10744 | opp_overlap 3299516, overlap 3299499 3299515 3299516 TTACTTAAATAATAA TTAAGGGAAGCACGGCT ACGAG AGCAGTGCTTCCTTTTA TCTTTCCCTTTTCCA TERM 4676 3299545 - 3299515 - R 80 -9.7 -3.65535 | opp_overlap 3299516, overlap 3299511 3299516 TTAAATAATAATTAA GGGAAGCACGGCT ACGAG AGCAGTGCTTCCT TTTATCTTTCCCTTT TERM 4677 3299544 - 3299516 - R 91 -13.2 -2.78237 | opp_overlap 3299516, overlap 3299515 3299511 TAAATAATAATTAAG GGAAGCACGGCT ACGAG AGCAGTGCTTCC TTTTATCTTTCCCTT TERM 4678 3299516 - 3299544 + r 100 -13.2 -4.81359 | opp_overlap 3299516 3299515 3299511 TAAATAATAATTAAG GGAAGCACGGCT ACGAG AGCAGTGCTTCC TTTTATCTTTCCCTT Dhaf_3083 3301732 - 3299579 - | protein of unknown function DUF162 TERM 4679 3300198 - 3300180 - G 77 -10.2 -3.51924 | overlap 3300182 CGGTCACCCATATAA GATGCGGG AGC CCCGCAGC AGGACTGGCCTTCCG TERM 4680 3300196 - 3300182 - G 82 -11.4 -3.33525 | overlap 3300180 GTCACCCATATAAGA TGCGGG AGC CCCGCA GCAGGACTGGCCTTC Dhaf_3084 3302300 - 3301725 - | protein of unknown function DUF162 TERM 4681 3302211 - 3302221 + g 73 -5.4 -4.58395 | overlap 3302205 AATAAGCTCCTCAGC CTCT TTG AGAG TTTTTACACGATGAC TERM 4682 3302453 - 3302503 + r 100 -8.2 -4.82333 | opp_overlap 3302460, overlap 3302454 3302455 AATTTCCTTTGCATA TAAAAAAGCGGGGAAGAGATGGTT TGA AGCCATCTCTTCCCCGCTCAAAGG TTTTTGGATTCTTAT TERM 4683 3302454 - 3302502 + r 76 -9.5 -3.47773 | opp_overlap 3302460, overlap 3302453 3302455 ATTTCCTTTGCATAT AAAAAAGCGGGGAAGAGATGGTT TGA AGCCATCTCTTCCCCGCTCAAAG GTTTTTGGATTCTTA TERM 4684 3302455 - 3302501 + r 91 -13 -2.67579 | opp_overlap 3302460, overlap 3302454 3302453 TTTCCTTTGCATATA AAAAAGCGGGGAAGAGATGGTT TGA AGCCATCTCTTCCCCGCTCAAA GGTTTTTGGATTCTT TERM 4685 3302496 - 3302460 - R 100 -23.9 -5.36441 | opp_overlap 3302455 3302454 3302453 TTTGCATATAAAAAA GCGGGGAAGAGATGGTT TGA AGCCATCTCTTCCCCGC TCAAAGGTTTTTGGA Dhaf_3085 3303771 - 3302515 - | Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) TERM 4686 3303915 - 3303887 - R 95 -13.2 -3.07013 | gap 1, opp_overlap 3303886 CAGTTCTTCAATATA GGC-GGCCGCTTC CTGA GAAGCGACCCGCC CTATTCAAATCTACG Dhaf_3086 3304843 - 3303956 - | Citryl-CoA lyase TERM 4687 3305020 - 3305056 + r 95 -14 -2.72463 | ACTTTATGTTTTCCA TTCTGGTATAGACG AAGCTATCC CGTCTATACCAGAA TGATTGGAGGTAAAT Dhaf_3087 3305977 - 3305081 - | CoA-binding domain protein Dhaf_3088 3306344 - 3306057 - | hypothetical protein Dhaf_3089 3307631 - 3306354 - | Succinate--CoA ligase (ADP-forming) Dhaf_3090 3308134 - 3308892 + | hypothetical protein Dhaf_3091 3309075 - 3309293 + | hypothetical protein Dhaf_3092 3309746 - 3309294 - | GCN5-related N-acetyltransferase TERM 4688 3309851 - 3309841 - R 76 -6.8 -4.53774 | overlap 3309827 AGAAACCAACCAAAA TGGC TTC GCCA TAGCATAAGTGCAGA TERM 4689 3309858 - 3309906 + r 100 -17 -3.73534 | gap 1, opp_overlap 3309860, overlap 3309860 GCTTCGCCATAGCAT AAGTGCAGAACCCCCTGATGT TTATCGGT ACA-CAGGGGGTTCTGCACTG TTATTAGTAGCCTTC TERM 4690 3309904 - 3309860 - R 100 -19.6 -3.46602 | gap 1, opp_overlap 3309858 3309860 TTCGCCATAGCATAA GTGCAGAACCCCCTGATGT TTATCGGT ACA-CAGGGGGTTCTGCAC TGTTATTAGTAGCCT TERM 4691 3309860 - 3309904 + r 100 -19.6 -3.44552 | gap 1, opp_overlap 3309860, overlap 3309858 TTCGCCATAGCATAA GTGCAGAACCCCCTGATGT TTATCGGT ACA-CAGGGGGTTCTGCAC TGTTATTAGTAGCCT Dhaf_3093 3311173 - 3309938 - | hypothetical protein Dhaf_3094 3312308 - 3311250 - | peptidase S58 DmpA TERM 4692 3311398 - 3311385 - G 77 -3.8 -5.0133 | CACTGCTTTAAAAAA GGGA TCCAGC TCCC AATCGCTGAGCGGTG Dhaf_3095 3312934 - 3312356 - | transcriptional regulator, TetR family TERM 4693 3312418 - 3312395 - G 85 -6 -5.0133 | opp_overlap 3312395 CAGTCCTTCAAAAAA GAGATTAAGG ACAT CCTCCATCTC TTTCTCTAAATCCCC TERM 4694 3312980 - 3312966 - H 86 -7 -5.06223 | opp_overlap 3312968, overlap 3312968 ACAAATTAAAGAAAA CCCGGC TTC GCCGTG CCTTAAACGCATACT Dhaf_3096 3313271 - 3313756 + | hypothetical protein TERM 4695 3313839 - 3313810 - T 82 -8 -4.49937 | opp_overlap 3313810 TCAAGAATAGCAAAA GAGAAGGCTT CTTAAATTTT AAGCCTTCTC TTTGTATTCCTCAAT TERM 4696 3313810 - 3313839 + T 76 -8 -4.24075 | opp_overlap 3313810 TCAAGAATAGCAAAA GAGAAGGCTT CTTAAATTTT AAGCCTTCTC TTTGTATTCCTCAAT Dhaf_3097 3314115 - 3313828 - | translation initiation factor 2B subunit Dhaf_3098 3315339 - 3314173 - | aminotransferase class I and II TERM 4697 3314806 - 3314795 - G 73 -7.2 -4.2687 | opp_overlap 3314797, overlap 3314796 TCGAAAAAGGACAAA GGCG CCAC CGCC GCAGTGGGGTTGTTA Dhaf_3099 3316236 - 3315376 - | PHP domain protein Dhaf_3100 3317217 - 3316270 - | Membrane dipeptidase TERM 4698 3317271 - 3317246 - R 71 -6.9 -4.12397 | gap 1, opp_overlap 3317265 3317266, overlap 3317266 TTACACAATCAGAAA CACCTGCC-GCT TTA AGCCAACAGGTG TCCTGCTTTAAAACC Dhaf_3101 3317584 - 3317324 - | Stage V sporulation protein S Dhaf_3102 3318498 - 3317719 - | metallophosphoesterase Dhaf_3103 3319096 - 3318584 - | hypothetical protein TERM 4699 3319256 - 3319232 - R 100 -12.2 -4.2408 | TTATAAAATTATAAA GGACAGGCGA TGTTC TCACCTGTCC GCAATGTTCAAGATT Dhaf_3104 3320836 - 3319286 - | RNA binding metal dependent phosphohydrolase TERM 4700 3320923 - 3320909 - R 100 -4.2 -6.23317 | opp_overlap 3320909 ATAAAAACAAAAAAA CTGGGA CCA TGCCAG TTCTTTAAAAGAAAC TERM 4701 3320951 - 3320938 - R 73 -5.3 -4.64861 | opp_overlap 3320950, overlap 3320950 GTTCTTTAAAAGAAA CCTTT AATT AAAGG CAAAATACATTGCCC TERM 4702 3321188 - 3321168 - R 100 -11.2 -4.53685 | opp_overlap 3321168 AAACTATAAGGAAAA CAGGAAGG ACTCG CCTTCCTG TTACTCCTTCGCTAT TERM 4703 3321168 - 3321188 + r 81 -11.2 -3.28537 | opp_overlap 3321168 AAACTATAAGGAAAA CAGGAAGG ACTCG CCTTCCTG TTACTCCTTCGCTAT Dhaf_3105 3321683 - 3321189 - | regulatory protein RecX Dhaf_3106 3322725 - 3321685 - | recA protein TERM 4704 3322235 - 3322247 + g 73 -7.7 -4.07306 | opp_overlap 3322233 GCATGTAAACCCACA TGGGA ATC TCCCA TTTCTCCTTCAATCT TERM 4705 3322463 - 3322451 - G 74 -6.9 -4.42386 | opp_overlap 3322462, overlap 3322454 3322458 3322459 TCCGCATCGATAAAA GCAGC AAC GCCGC CCAGCTTCTGGGCTT TERM 4706 3322462 - 3322476 + g 82 -11.4 -3.29829 | opp_overlap 3322451 3322459 3322458 3322454 AAAAGCAGCAACGCC GCCCAG CTT CTGGGC TTCTGCCGCAATATG TERM 4707 3322786 - 3322773 - R 79 -3.1 -5.31275 | TTTCATCACAAAAAA CAAAC ATTT GTTCG ATTTCCATTATACTT Dhaf_3107 3323710 - 3322892 - | hypothetical protein Dhaf_3108 3324273 - 3323746 - | hypothetical protein Dhaf_3109 3325251 - 3324406 - | Ndr family protein Dhaf_3110 3326225 - 3325248 - | transcriptional regulator, PadR-like family TERM 4708 3326244 - 3326279 + r 100 -16.6 -3.05384 | opp_overlap 3326255 TCGTTTCCCCCTTAA TCTTTATCATATGTTA TTAA TAACATATGATAAAGA TTAAATCAAGAAGAG Dhaf_3111 3326769 - 3326416 - | hypothetical protein TERM 4709 3326962 - 3326904 - R 100 -18.3 -3.30173 | opp_overlap 3326919 3326957, overlap 3326905 3326919 AAAAACAGATGAATA TCGATAAAGAAAAAACCGGGAGGGTGC CCTGC GCGCCCTCCCGGTTTTTTCTTTGCCCG GATCCCCGGAATATA TERM 4710 3326961 - 3326905 - R 100 -21.8 -2.56477 | opp_overlap 3326919 3326957, overlap 3326904 3326919 AAAACAGATGAATAT CGATAAAGAAAAAACCGGGAGGGTGC CCTGC GCGCCCTCCCGGTTTTTTCTTTGCCC GGATCCCCGGAATAT TERM 4711 3326947 - 3326919 - R 100 -17.4 -5.72622 | opp_overlap 3326919, overlap 3326905 3326904 TCGATAAAGAAAAAA CCGGGAGGGTGC CCTGC GCGCCCTCCCGG TTTTTTCTTTGCCCG TERM 4712 3326919 - 3326947 + r 100 -19.6 -5.63517 | opp_overlap 3326919 3326905 3326904 TCGATAAAGAAAAAA CCGGGAGGGTGC CCTGC GCGCCCTCCCGG TTTTTTCTTTGCCCG Dhaf_3112 3327624 - 3326998 - | transcriptional regulator, XRE family TERM 4713 3327151 - 3327133 - G 74 -9.6 -3.55761 | CAGCCATCCCTGAAA TATCCACC ATA GGCGGATA CCCGTGGCATATCGC TERM 4714 3327779 - 3327728 - R 100 -13.8 -3.09635 | opp_overlap 3327726 3327731 3327733 3327734 3327746, overlap 3327734 AGTTGCATCAGGGAA CAAAAAGCCGCTGCTCAACGAACT TTAC AGTCCGTTTGACAGCGGCCTATTG ACTATTTTTGCGGAG TERM 4715 3327773 - 3327734 - R 100 -13.6 -5.11063 | opp_overlap 3327734 3327733 3327731 3327726 3327746, overlap 3327728 ATCAGGGAACAAAAA GCCGCTGCTCAACGAACT TTAC AGTCCGTTTGACAGCGGC CTATTGACTATTTTT TERM 4716 3327734 - 3327773 + r 79 -11.4 -2.52112 | opp_overlap 3327728 3327734, overlap 3327733 3327731 3327726 3327746 ATCAGGGAACAAAAA GCCGCTGCTCAACGAACT TTAC AGTCCGTTTGACAGCGGC CTATTGACTATTTTT Dhaf_3113 3328871 - 3327819 - | Methyltransferase type 11 Dhaf_3114 3329200 - 3328868 - | transcriptional regulator, ArsR family Dhaf_3115 3329865 - 3329425 - | 3-demethylubiquinone-9 3-methyltransferase Dhaf_3116 3330309 - 3329905 - | putative cytoplasmic protein TERM 4717 3330154 - 3330169 + g 71 -4.6 -4.57482 | CTCCACGGCAGGGTT CGATGC CACC GCCTCG TTTATTTCTCCCTCG Dhaf_3117 3330566 - 3330306 - | transcriptional regulator, MerR family TERM 4718 3330638 - 3330689 + r 100 -12.4 -4.63044 | opp_overlap 3330643, overlap 3330643 AGTCCGCTGGACAAC AAAAAGGCCCCTGTTCAACGAACT TTAC AGTCCGTTTGACAGCGGCCTTTTG TTTCTTTATCTGGCT TERM 4719 3330684 - 3330643 - R 100 -12.3 -5.18726 | opp_overlap 3330643 3330638 GCTGGACAACAAAAA GGCCCCTGTTCAACGAACT TTAC AGTCCGTTTGACAGCGGCC TTTTGTTTCTTTATC TERM 4720 3330643 - 3330684 + r 100 -12.3 -5.22481 | opp_overlap 3330643, overlap 3330638 GCTGGACAACAAAAA GGCCCCTGTTCAACGAACT TTAC AGTCCGTTTGACAGCGGCC TTTTGTTTCTTTATC Dhaf_3118 3332287 - 3330695 - | DEAD/DEAH box helicase domain protein Dhaf_3119 3333542 - 3332295 - | competence/damage-inducible protein CinA TERM 4721 3333810 - 3333780 - R 100 -11.3 -4.77165 | opp_overlap 3333778 3333780 TTCTGCATAAGAAAA GACATAGCTTTCC TCAGT GGAAAACTATGCC TCTTTGAAGTAATCA Dhaf_3120 3334316 - 3333858 - | hypothetical protein TERM 4722 3334584 - 3334534 - R 100 -13.5 -4.43477 | opp_overlap 3334532 3334531, overlap 3334576 TTTAGGCAAGTAAAA GACCTTCAAATCTTATGCAGTCC GATTA GAACTGTCTAAGAATTGAAGGTC AAATTGTTTAGGAAT Dhaf_3121 3336084 - 3334603 - | Microtubule-severing ATPase TERM 4723 3335855 - 3335840 - G 75 -5.4 -4.73682 | opp_overlap 3335840, overlap 3335833 CTGTATAACAGAAAA TCCAAG GCTT CCTGGA GTTCTTTCTTAGCGG Dhaf_3122 3336665 - 3336126 - | hypothetical protein TERM 4724 3336978 - 3336944 - R 91 -8 -4.88293 | opp_overlap 3336958 AAGCTTAAAAATAAA GAACAGAATCCTCC GTTTTCT GGAAAACTCTGTTC ATTATTATAGGTTTT Dhaf_3123 3337549 - 3336992 - | CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase Dhaf_3124 3338874 - 3337546 - | MiaB-like tRNA modifying enzyme YliG Dhaf_3125 3339202 - 3339795 + | hypothetical protein Dhaf_3126 3341744 - 3339816 - | Radical SAM domain protein TERM 4725 3341096 - 3341118 + g 80 -7.1 -4.56597 | gap 1, overlap 3341100 GATAAGCAGGGAGCT GGATGATTCC TTCC GGAATC-TCC TTTTTCCAAGGAACC TERM 4726 3341785 - 3341768 - R 100 -11.3 -5.00138 | opp_overlap 3341761 TAGTGAAATCAAAAA CTCCCAC AAGT GTGGGAG GTGTGAATGTCTTTA Dhaf_3127 3342289 - 3341798 - | protein of unknown function DUF520 TERM 4727 3342354 - 3342325 - R 74 -9.9 -3.19889 | opp_overlap 3342325 3342326 3342328 CATGAATATATTCAA CCAGCCTCAAGCC TCAA GGCAGGAGGCTGA TTTGATTTGCGCTGT TERM 4728 3342325 - 3342354 + r 76 -7.7 -4.07647 | opp_overlap 3342325, overlap 3342326 3342328 CATGAATATATTCAA CCAGCCTCAAGCC TCAA GGCAGGAGGCTGA TTTGATTTGCGCTGT TERM 4729 3342326 - 3342353 + r 79 -11.2 -3.03865 | opp_overlap 3342325, overlap 3342325 3342328 ATGAATATATTCAAC CAGCCTCAAGCC TCAA GGCAGGAGGCTG ATTTGATTTGCGCTG Dhaf_3128 3343141 - 3342338 - | transcriptional regulator, XRE family Dhaf_3129 3343902 - 3343165 - | hypothetical protein Dhaf_3130 3344962 - 3343886 - | tRNA 2-selenouridine synthase TERM 4730 3344770 - 3344751 - G 81 -12.8 -2.55015 | opp_overlap 3344751, overlap 3344747 AGTCCATCCAACTTA GGGCCGGC TATA GCCAGCCC TTGCTCCTTGGCTAA TERM 4731 3344751 - 3344770 + g 75 -10.6 -3.2827 | opp_overlap 3344747 3344751 AGTCCATCCAACTTA GGGCCGGC TATA GCCAGCCC TTGCTCCTTGGCTAA Dhaf_3131 3347371 - 3345032 - | cell divisionFtsK/SpoIIIE TERM 4732 3345169 - 3345159 - G 73 -8.2 -3.83771 | overlap 3345151 AACAAATCCATCAAA CGGG CCG CCCG GGTGTAGCCGATGCG TERM 4733 3345703 - 3345721 + g 83 -7.4 -4.7261 | opp_overlap 3345691 3345689 3345706 TCACCACCACATAGG GAAGAGGC GGC GCATCTTC TTTCTTTTCCTGGGT TERM 4734 3347577 - 3347607 + r 76 -10.7 -2.69528 | gap 1, opp_overlap 3347584, overlap 3347579 3347584 CTTCTGATAGTATAG CAA-AAAATCGGCT CTTC AGCCGATTTTATTG TAAATTTAACTTTCA TERM 4735 3347579 - 3347604 + r 73 -9.1 -3.48465 | opp_overlap 3347584, overlap 3347577 3347584 TCTGATAGTATAGCA AAAAATCGGCT CTTC AGCCGATTTTA TTGTAAATTTAACTT TERM 4736 3347599 - 3347584 - R 100 -9 -5.23316 | opp_overlap 3347579 3347577 3347584 TAGTATAGCAAAAAA TCGGCT CTTC AGCCGA TTTTATTGTAAATTT TERM 4737 3347584 - 3347599 + r 100 -9 -4.81863 | opp_overlap 3347584, overlap 3347579 3347577 TAGTATAGCAAAAAA TCGGCT CTTC AGCCGA TTTTATTGTAAATTT Dhaf_3132 3348305 - 3347613 - | peptidase S14 ClpP TERM 4738 3348424 - 3348405 - R 91 -5 -5.60993 | TTGCTCATAAAAAAA TGCAGG TCACTCTT CCTGCA CAATTTCACCTTCCT Dhaf_3133 3348747 - 3348430 - | hypothetical protein Dhaf_3134 3348894 - 3350450 + | ABC transporter related TERM 4739 3350460 - 3350498 + T 100 -11.8 -3.922 | opp_overlap 3350462, overlap 3350462 GTCTAAACACCCAGA AACGCCCTAATCTCAC CATAAAA GTGAGACTAGGGCGTC TTTCATTAAGGGTTT TERM 4740 3350462 - 3350496 + T 100 -14.4 -3.54414 | opp_overlap 3350462, overlap 3350460 CTAAACACCCAGAAA CGCCCTAATCTCAC CATAAAA GTGAGACTAGGGCG TCTTTCATTAAGGGT TERM 4741 3350496 - 3350462 - T 100 -17.3 -3.99957 | opp_overlap 3350460 3350462 CTAAACACCCAGAAA CGCCCTAATCTCACC ATAAA AGTGAGACTAGGGCG TCTTTCATTAAGGGT Dhaf_3135 3350893 - 3350534 - | hypothetical protein Dhaf_3136 3352930 - 3350894 - | methyl-accepting chemotaxis sensory transducer TERM 4742 3351372 - 3351388 + g 72 -10.8 -2.71712 | opp_overlap 3351347, overlap 3351371 TGTTCACCGGCACGG GCCGCC TCTAT GGCGGC ATTTAAAGCCAGCAG TERM 4743 3351607 - 3351618 + g 74 -3 -5.00884 | opp_overlap 3351585 TCTCCACATTTGCGG TAGA GCTA TCTA TTTTTTCCAGACCCT TERM 4744 3353009 - 3352985 - R 72 -6.5 -4.30995 | opp_overlap 3352982, overlap 3352982 GCCTCTATAAAATAA TCTGCTGTAAA AAC CCTACAACAGA TTGTTTCTTTATTCA TERM 4745 3353221 - 3353189 - R 76 -7.8 -4.07859 | gap 1, overlap 3353182 CGAAGAAACAGCAAA GAGCCGCAGCAAATC ATAA GATTT-CCACGGCCC TCATACCTGCTCTTA Dhaf_3137 3353847 - 3353254 - | alpha-ribazole phosphatase Dhaf_3138 3355040 - 3353844 - | protein of unknown function DUF182 Dhaf_3139 3356202 - 3355033 - | metal dependent phosphohydrolase TERM 4746 3355497 - 3355470 - G 80 -2.9 -5.40072 | gap 2, opp_overlap 3355483, overlap 3355473 GCTCGCCCAAAAAAA CACT-T-AAACGG GCCA CCGTTTCACAGTG TTTGATGACCTGGTC Dhaf_3140 3357542 - 3356199 - | hypothetical protein TERM 4747 3357444 - 3357458 + g 77 -2.8 -5.1861 | CCCCAGTTTGTTCAG CTGATA ATC TCTCAG TTTTTTGGTGGTAAG Dhaf_3141 3358870 - 3357545 - | Radical SAM domain protein TERM 4748 3357688 - 3357672 - G 76 -10.9 -3.14878 | overlap 3357670 CGCTCTAAGTCAAGA TTCCAGG CAT CCTGGAA GGCCATGCCGGTCAG Dhaf_3142 3359601 - 3358855 - | Methyltransferase type 11 Dhaf_3143 3360034 - 3359585 - | C_GCAxxG_C_C family protein Dhaf_3144 3360255 - 3360046 - | hypothetical protein Dhaf_3145 3362561 - 3360252 - | FAD dependent oxidoreductase TERM 4749 3360625 - 3360610 - G 83 -8.2 -4.56597 | TGGCGGTGTGAAAAA CCCGGA TCCT CCCGGG TCGCCGCCTCCCCTT TERM 4750 3361279 - 3361269 - G 73 -2.4 -5.02476 | overlap 3361275 ACAGCCTGGAAAAAA GACG AAC CGGC TCTCACTGAATCCGG TERM 4751 3362004 - 3361969 - G 73 -7.7 -4.13648 | opp_overlap 3361965 3361969 3361973, overlap 3361965 AAGGCGATATACAAA GCAGGGAACTC-CTCCT GCAA AGGAGGGAGATCC-TGC TGTGTGATTGGAGCA TERM 4752 3362382 - 3362363 - G 76 -8.6 -3.99592 | gap 1 AGGGATGATCACAAA TCCGGGAGA TGA TC-CCCGGA AAAGGCTGTTTTTGC TERM 4753 3362640 - 3362591 - R 93 -12.1 -3.62046 | opp_overlap 3362609 3362609, overlap 3362592 CGACCGTGTGAAGAA GGGCCGCTGCAAACCTTACCGGC CTGA ACCGGCCAGGTTTGCAACAGCAT CGCATACTCATGGGA TERM 4754 3362639 - 3362592 - R 100 -15.6 -2.77013 | opp_overlap 3362609 3362609, overlap 3362591 GACCGTGTGAAGAAG GGCCGCTGCAAACCTTACCGGC CTGA ACCGGCCAGGTTTGCAACAGCA TCGCATACTCATGGG Dhaf_3146 3365426 - 3362694 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 4755 3365368 - 3365386 + g 76 -9.6 -3.62275 | overlap 3365369 TTAGCCAGGGTTACT TCCTCATC GAC GATGAGGG TTTGGCGTACTCCGT TERM 4756 3365369 - 3365385 + g 74 -10.9 -2.77043 | overlap 3365368 TAGCCAGGGTTACTT CCTCATC GAC GATGAGG GTTTGGCGTACTCCG Dhaf_3147 3365742 - 3365599 - | hypothetical protein TERM 4757 3366535 - 3366517 - g 75 -3.7 -5.00884 | opp_overlap 3366532, overlap 3366519 ATTGGCCGGAAAAAA GACGACC TGATC GGCCGGC ATGTTACCGATGTTT Dhaf_3148 3365773 - 3367659 + | GAF modulated sigma54 specific transcriptional regulator, Fis family TERM 4758 3367708 - 3367689 - f 71 -8.6 -3.41795 | opp_overlap 3367683, overlap 3367678 AAACCTCCACTATAA CACCAGAC TTTT ATCTGGTG GTACGGTGTAATAGA TERM 4759 3368066 - 3368048 - g 83 -2.2 -5.5943 | overlap 3368049 3368059 AAATGAGCAAAAAAA TGCCGAGG AAG CCCTGGCG ATTGCCGGAAAGCTG Dhaf_3149 3367743 - 3368504 + | transcriptional regulator, MerR family TERM 4760 3368502 - 3368527 + F 100 -10.6 -4.40561 | opp_overlap 3368507 AGAAACCCTCCACTT TAACACCAGA CTTTGT TCTGGTGTTA TTCTTTTTAGGCAAA Dhaf_3150 3368564 - 3369307 + | ABC transporter related TERM 4761 3369800 - 3369775 - gT 87 -8.3 -4.49756 | gap 1, opp_overlap 3369773 3369775 CGCCAAACATTAAAA CAGCAGG-TGCC GCT GCCAGCCTGCTG TATTTTCCAATGCTT TERM 4762 3369775 - 3369800 + GT 73 -8.3 -3.68036 | gap 1, opp_overlap 3369775, overlap 3369773 CGCCAAACATTAAAA CAGCAGG-TGCC GCT GCCAGCCTGCTG TATTTTCCAATGCTT Dhaf_3151 3369282 - 3370025 + | ABC-2 type transporter Dhaf_3152 3370596 - 3370012 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_3153 3372662 - 3370593 - | molybdopterin oxidoreductase TERM 4763 3371231 - 3371242 + g 75 -5.8 -4.56597 | CGGCAAAATACTCTG TGGG GAGA CCCA TTTTTGCCGCAAGCA TERM 4764 3371741 - 3371759 + g 100 -11.7 -5.14563 | TGACGATGCCCCGTC CCGGCCA CATGA TGGCCGG TTTTTTGGTGCCCAG Dhaf_3154 3373908 - 3372649 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Dhaf_3155 3374372 - 3373896 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 4765 3374416 - 3374463 + r 100 -17.4 -4.29325 | gap 1, opp_overlap 3374427, overlap 3374427 TGTTGCTTTATCCTT TCTGGG-ACAAAGGGCTATCT AACTAAG AGATAGCCCTTTGTTCTCAGA TTTTAGATGTTAATA TERM 4766 3374427 - 3374451 + r 93 -10.1 -4.33851 | opp_overlap 3374427, overlap 3374416 CCTTTCTGGGACAAA GGGCTATCT AACTAAG AGATAGCCC TTTGTTCTCAGATTT TERM 4767 3374451 - 3374427 - R 84 -10.1 -3.85698 | opp_overlap 3374416 3374427 CCTTTCTGGGACAAA GGGCTATCT AACTAAG AGATAGCCC TTTGTTCTCAGATTT Dhaf_3156 3375404 - 3374466 - | protein of unknown function DUF81 Dhaf_3157 3375840 - 3375424 - | hypothetical protein TERM 4768 3375990 - 3375975 - R 72 -6.2 -4.33674 | opp_overlap 3375974 3375975, overlap 3375966 3375969 AACAGACAAGATAAA TGTCAT CTAG ATGACA CTTCTCATTAAGATC TERM 4769 3376055 - 3376012 - R 100 -13.2 -4.20042 | opp_overlap 3376012 ATTAAGATCCTAAAA GGTGTCTTCCGCTCAGCC TTTTCTCT GGCTAATCGGAGGACACC TTCATCAAAAACCCT TERM 4770 3376012 - 3376055 + r 95 -13.2 -3.14211 | opp_overlap 3376012 ATTAAGATCCTAAAA GGTGTCTTCCGCTCAGCC TTTTCTCT GGCTAATCGGAGGACACC TTCATCAAAAACCCT Dhaf_3158 3376753 - 3376082 - | transcriptional regulator, Crp/Fnr family TERM 4771 3376916 - 3376891 - R 89 -10.5 -3.99805 | opp_overlap 3376886 3376893, overlap 3376885 CGCTAAAAATTCAAA TGGGCTATGCA ATAC TGCATAGCCTA TTAAGCTTATTTGTG TERM 4772 3376893 - 3376914 + r 95 -13.1 -3.1382 | opp_overlap 3376891 3376885, overlap 3376886 CTAAAAATTCAAATG GGCTATGCA ATAC TGCATAGCC TATTAAGCTTATTTG Dhaf_3159 3377621 - 3376923 - | hypothetical protein Dhaf_3160 3378949 - 3377618 - | protein of unknown function DUF81 TERM 4773 3379221 - 3379241 + r 74 -4.7 -4.82667 | opp_overlap 3379221 3379224 TGTAACACTTAAAAC TTATCTTGC CCG GCAAGGAAA TTTTTCGTATGATAA TERM 4774 3379499 - 3379460 - R 87 -6.4 -5.0925 | opp_overlap 3379462 3379488, overlap 3379462 CTGGAAAATTAAAAA GAGGGTGTCGCGAAAC AATTTGCA GCTTCACGGCACCCTT GCTTTTCTACCATTA TERM 4775 3379497 - 3379462 - R 83 -9 -4.16392 | opp_overlap 3379462 3379488, overlap 3379460 GGAAAATTAAAAAGA GGGTGTCGCGAAAC AATTTGCA GCTTCACGGCACCC TTGCTTTTCTACCAT Dhaf_3161 3380115 - 3379516 - | hypothetical protein Dhaf_3162 3380916 - 3380134 - | hypothetical protein TERM 4776 3380984 - 3380927 - R 100 -22.5 -3.71991 | gap 1, opp_overlap 3380930 3380939 3380942 3380947, overlap 3380929 3380930 3380942 3380947 GACAAACCTTAAGAA TATCCCCGGAAATAACAAAAGACGGC TTCCTGT GCCGTCTTTTGTTATTTCCGGGC-TA TACTATTGTGGTGTG TERM 4777 3380983 - 3380929 - R 100 -23.2 -3.4314 | opp_overlap 3380930 3380939 3380942 3380947, overlap 3380927 3380930 3380942 3380947 CAAACCTTAAGAATA TCCCCGGAAATAACAAAAGACGGC TTCCTGT GCCGTCTTTTGTTATTTCCGGGCT ATACTATTGTGGTGT TERM 4778 3380930 - 3380982 + r 100 -26.7 -2.9544 | opp_overlap 3380929 3380927 3380930 3380942 3380947, overlap 3380939 3380942 3380947 AAACCTTAAGAATAT CCCCGGAAATAACAAAAGACGGC TTCCTGT GCCGTCTTTTGTTATTTCCGGGC TATACTATTGTGGTG TERM 4779 3380982 - 3380930 - R 100 -26.7 -2.65161 | opp_overlap 3380930 3380939 3380942 3380947, overlap 3380929 3380927 3380942 3380947 AAACCTTAAGAATAT CCCCGGAAATAACAAAAGACGGC TTCCTGT GCCGTCTTTTGTTATTTCCGGGC TATACTATTGTGGTG TERM 4780 3380939 - 3380973 + r 100 -16 -3.56821 | opp_overlap 3380930 3380929 3380927 3380942 3380947, overlap 3380930 3380942 3380947 GAATATCCCCGGAAA TAACAAAAGACGGC TTCCTGT GCCGTCTTTTGTTA TTTCCGGGCTATACT TERM 4781 3380970 - 3380942 - R 100 -13.3 -3.9122 | opp_overlap 3380942 3380939 3380930 3380947, overlap 3380930 3380929 3380927 3380947 TATCCCCGGAAATAA CAAAAGACGGC TTCCTGT GCCGTCTTTTG TTATTTCCGGGCTAT TERM 4782 3380942 - 3380970 + r 100 -13.3 -3.91984 | opp_overlap 3380930 3380929 3380927 3380942 3380947, overlap 3380939 3380930 3380947 TATCCCCGGAAATAA CAAAAGACGGC TTCCTGT GCCGTCTTTTG TTATTTCCGGGCTAT TERM 4783 3380947 - 3380965 + r 89 -7.4 -5.00196 | opp_overlap 3380942 3380930 3380929 3380927 3380947, overlap 3380942 3380939 3380930 CCGGAAATAACAAAA GACGGC TTCCTGT GCCGTC TTTTGTTATTTCCGG TERM 4784 3380965 - 3380947 - R 89 -7.4 -5.00196 | opp_overlap 3380947 3380942 3380939 3380930, overlap 3380942 3380930 3380929 3380927 CCGGAAATAACAAAA GACGGC TTCCTGT GCCGTC TTTTGTTATTTCCGG Dhaf_3163 3382607 - 3381030 - | hypothetical protein TERM 4785 3382383 - 3382397 + g 80 -8.6 -4.39954 | opp_overlap 3382376 3382382 TTTAAGAAGAAATGT TTTCGC CGA GCGAAA TTTATCTTCTTCTTC Dhaf_3164 3383103 - 3382597 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 4786 3383279 - 3383291 + r 74 -6.2 -4.51743 | overlap 3383284 3383289 AATTCCCTAATAGCC GGCC TCCGT GGCC TTTATTTGATCGTAA Dhaf_3165 3384187 - 3383270 - | 2-dehydropantoate 2-reductase TERM 4787 3385341 - 3385328 - g 77 -3.8 -5.16038 | AGAGAAGAAACAAAA CTGG AAGTAG CCAG AAATCTGCTGGGGTT Dhaf_3166 3384476 - 3385429 + | putative transposase YhgA family protein TERM 4788 3385525 - 3385539 + T 72 -10 -2.78816 | TCGGCTTCGGCGATA GTCTCC ACT GGAGAC TATCGTGCCGCGTAA TERM 4789 3385632 - 3385618 - T 70 -7.2 -3.83026 | opp_overlap 3385618 GTTCGGGATACGAAA TGATGT AGT ACATCA TTTCGGCCAAGCCAC TERM 4790 3385844 - 3385806 - T 100 -15.5 -3.38326 | opp_overlap 3385807 3385813, overlap 3385807 3385813 CACAATTTGAACCAA TGCAAAAGAGACCATCT TCTAT AGACGGTCTCTTTTGCT TACTTACCTGGCAAC TERM 4791 3385807 - 3385843 + T 100 -16.8 -3.37344 | opp_overlap 3385806 3385807 3385813, overlap 3385813 ACAATTTGAACCAAT GCAAAAGAGACCATCT TCTAT AGACGGTCTCTTTTGC TTACTTACCTGGCAA TERM 4792 3385843 - 3385807 - T 100 -19 -2.62513 | opp_overlap 3385807 3385813, overlap 3385806 3385813 ACAATTTGAACCAAT GCAAAAGAGACCATCT TCTAT AGACGGTCTCTTTTGC TTACTTACCTGGCAA TERM 4793 3385837 - 3385813 - T 100 -10.8 -4.32201 | opp_overlap 3385807 3385813, overlap 3385807 3385806 TGAACCAATGCAAAA GAGACCATCT TCTAT AGACGGTCTC TTTTGCTTACTTACC TERM 4794 3385813 - 3385837 + T 87 -8.6 -4.4959 | opp_overlap 3385813 3385807 3385806, overlap 3385807 TGAACCAATGCAAAA GAGACCATCT TCTAT AGACGGTCTC TTTTGCTTACTTACC TERM 4795 3386552 - 3386568 + T 70 -5.1 -4.4715 | opp_overlap 3386549, overlap 3386533 GGGGGAGATAAGCCT GTTATCC CCA GGGTAGC TTTTATCCGTTGAGC TERM 4796 3387685 - 3387707 + T 88 -9.8 -4.15833 | AATCCTTAGGTTTTC GGCGGGTGAG ATT CTCACTCACC TTTTCGCATACTCAT TERM 4797 3388561 - 3388576 + T 74 -10.4 -2.71011 | overlap 3388556 3388574 GGAGTATTTAGCCTT GGGAGG TGGT CCTCCC TGCTTCCCACGGGGT TERM 4798 3388726 - 3388745 + T 70 -7.8 -3.62096 | opp_overlap 3388725 3388724 GAAGGTCCTACAACC CCAACCCC CGAA GGGATTGG TTTGGGCTGGTCCCG TERM 4799 3390337 - 3390355 + T 71 -6.6 -4.07687 | AGTTTCCGATGCAGT CCCAGGGT TGA GCCCTAGG TTTTCACACCAGACT TERM 4800 3391484 - 3391451 - T 95 -7.6 -5.00616 | opp_overlap 3391451 TTTGCTTTGAAAAAA CGGTTTGAACAA AAAATAGAAA TCGTTCAAACCG TTGCTATGATTAGGT Dhaf_3167 3392405 - 3391764 - | tRNA (guanine-N(7)-)-methyltransferase Dhaf_3168 3393269 - 3392526 - | acyl-ACP thioesterase TERM 4801 3392910 - 3392920 + g 71 -4.6 -4.48877 | CTGGAGTGGGATCCG GGTG GGG CGCC TTTTATCAATATTTA TERM 4802 3393850 - 3393880 + G 77 -4.1 -5.10154 | gap 1, overlap 3393877 CCCGTCTTAGGGGGA TTGTTTGTCAAGCT CATC AGCT-GGCGAGCAA TTTTTGCTTTTGGCT Dhaf_3169 3393385 - 3394773 + | major facilitator superfamily MFS_1 Dhaf_3170 3397124 - 3394767 - | cyclic nucleotide-binding protein TERM 4803 3395511 - 3395497 - G 75 -5.6 -4.70879 | overlap 3395489 3395488 CCCAAAGGGCAAAAA TGCCGG CAC CAGGCA TGGCGGGGATAAAGA TERM 4804 3396975 - 3396987 + g 79 -3.3 -5.2189 | opp_overlap 3396975, overlap 3396982 TTCTTCGAGTATATA GACTG CCG CAGGC TTTTTTCCTGCTTCG TERM 4805 3398062 - 3398044 - g 72 -10.4 -3.05715 | AAGCCCTCGACGGAA TCTGTACA CTC TGTACAGA AACATTGGAGCTCTT TERM 4806 3398193 - 3398207 + G 70 -7.8 -3.91897 | opp_overlap 3398192, overlap 3398203 3398204 AAGCTTCAGGAAGAT GGCTTC ATG GAGGCC TTTCTCGCTAAAGGC Dhaf_3171 3397254 - 3398339 + | glucokinase Dhaf_3172 3398760 - 3398389 - | hypothetical protein TERM 4807 3399767 - 3399749 - g 80 -4.4 -5.20216 | overlap 3399750 3399753 CAGATGATTAAAAAA GCCAGCAG CTC CAGCTGCC CGGTTGAGAAGATGT Dhaf_3173 3399438 - 3400609 + | transposase IS3/IS911 family protein Dhaf_3175 3401106 - 3400852 - | hypothetical protein TERM 4808 3402648 - 3402633 - H 70 -7.6 -3.58536 | AAAGCCAGCTGGAAA GACTTC ATCC GAAGTC TAAAAGAACGAGTGT TERM 4809 3403094 - 3403050 - H 100 -15.2 -3.65351 | gap 1, opp_overlap 3403051 3403052, overlap 3403052 GGATTTTTATTCAAA GAGGCTGTCCGAAATTGGTAC GCGC GTACTTATTTCGGACAGCC-C TTTTACTTCCGGCAA TERM 4810 3403051 - 3403094 + H 100 -17.6 -4.4078 | opp_overlap 3403050 3403052, overlap 3403052 GATTTTTATTCAAAG AGGCTGTCCGAAATTGGTAC GCGC GTACTTATTTCGGACAGCCC TTTTACTTCCGGCAA TERM 4811 3403052 - 3403093 + H 100 -21.1 -3.24146 | opp_overlap 3403050 3403052, overlap 3403051 ATTTTTATTCAAAGA GGCTGTCCGAAATTGGTAC GCGC GTACTTATTTCGGACAGCC CTTTTACTTCCGGCA TERM 4812 3403093 - 3403052 - H 100 -18.9 -3.40775 | opp_overlap 3403052 3403051, overlap 3403050 ATTTTTATTCAAAGA GGCTGTCCGAAATTGGTAC GCGC GTACTTATTTCGGACAGCC CTTTTACTTCCGGCA TERM 4813 3403562 - 3403582 + G 71 -8.9 -3.44527 | overlap 3403579 TCCAGAATTTAGGAG CGGCGGGAA TGC TGCTCGCCG TTATGCTCATGGCTG TERM 4814 3403842 - 3403853 + G 71 -7.2 -4.01939 | overlap 3403833 TATCGCCCGGCTGCT GCCG CTCC CGGC TTTCATTGTCAATTA Dhaf_3177 3403411 - 3404076 + | SNARE associated Golgi protein TERM 4815 3404558 - 3404546 - g 79 -3.3 -5.28942 | opp_overlap 3404556, overlap 3404540 CAGTTGAAAGAAAAA CGGAT CCT AACCG TTCCCCTGGCTGCCG Dhaf_3178 3404168 - 3405316 + | Monogalactosyldiacylglycerol synthase Dhaf_3179 3405934 - 3405332 - | hypothetical protein Dhaf_3180 3406487 - 3406023 - | hypothetical protein Dhaf_3181 3407072 - 3406599 - | ABC-type antimicrobial peptide transport system ATPase component-like protein TERM 4816 3406722 - 3406751 + g 83 -4.3 -5.42259 | overlap 3406712 3406711 GGCGTCCAGAGAGCC TGTGGGTTCATCT GCTA AAATGATCTCACA TTTTTTTAGAAATAA TERM 4817 3407131 - 3407080 - R 100 -16.9 -4.12532 | gap 1, opp_overlap 3407089 3407095 TTTTGCATAGAGAAA CCTCCATAATAGATTCGTCTTGGT TAATC ACCA-GACGTCTCTATTATGGAGG AATAAACAAAATGTT TERM 4818 3407161 - 3407138 - R 74 -6.8 -4.258 | opp_overlap 3407138, overlap 3407143 3407155 3407157 TTATGGAGGAATAAA CAAAATGTTG AATA CAACATTCCG ATTCTTTTAATCGAA TERM 4819 3407156 - 3407143 - R 81 -5.3 -5.12172 | opp_overlap 3407138, overlap 3407138 3407155 GAGGAATAAACAAAA TGTTG AATA CAACA TTCCGATTCTTTTAA Dhaf_3182 3407893 - 3407465 - | hypothetical protein Dhaf_3183 3408245 - 3407907 - | hypothetical protein TERM 4820 3408196 - 3408222 + g 83 -4.5 -5.23644 | gap 1, opp_overlap 3408197 3408198, overlap 3408197 3408197 CACAGTATGACAAAA AT-GGCATTGCT CAGA AGCAATGCCCAA TTTTTATGTTTGATT TERM 4821 3408220 - 3408197 - G 100 -9.6 -4.93898 | opp_overlap 3408196 3408197 3408197, overlap 3408198 ACAGTATGACAAAAA TGGCATTGCT CAGA AGCAATGCCC AATTTTTATGTTTGA TERM 4822 3408219 - 3408198 - G 89 -13.1 -3.55254 | opp_overlap 3408197 3408197 3408196, overlap 3408197 CAGTATGACAAAAAT GGCATTGCT CAGA AGCAATGCC CAATTTTTATGTTTG Dhaf_3184 3409206 - 3408226 - | Polyprenyl synthetase Dhaf_3185 3409397 - 3409197 - | hypothetical protein TERM 4823 3409767 - 3409720 - R 100 -21.6 -4.24606 | gap 1, opp_overlap 3409718 3409717 3409725 AACCGATACGGAAAA GCAAAGAGATAGGCACTACCTCT TGC AG-GGCAGCGCCTACCTCTTTGC GAATTCTTTGAACAT TERM 4824 3409725 - 3409762 + r 70 -7.7 -3.6512 | gap 1, opp_overlap 3409720, overlap 3409718 3409717 ATACGGAAAAGCAAA GAGATAGGCACTACCTCT TGC AG-GGCAGCGCCTACCTC TTTGCGAATTCTTTG Dhaf_3186 3410094 - 3409795 - | addiction module toxin, RelE/StbE family Dhaf_3187 3410374 - 3410087 - | addiction module antitoxin, RelB/DinJ family Dhaf_3188 3410599 - 3410396 - | prophage LambdaSa04, RelE/ParE family protein Dhaf_3189 3410855 - 3410589 - | prevent-host-death family protein TERM 4825 3410750 - 3410760 + g 83 -2.4 -5.56673 | opp_overlap 3410750 TCATAATAACTAAAT CGCC ATA GCCG TTTTTTGTTATGAAT TERM 4826 3410962 - 3410931 - R 80 -3.7 -5.40474 | opp_overlap 3410935, overlap 3410935 AGTTTGGCAAAAAAA GGAGGAGTTTAGA CAACTC TCTATAATCCCCC TTTTTGACGCACGCC Dhaf_3190 3412796 - 3411183 - | hypothetical protein TERM 4827 3411643 - 3411656 + g 71 -4.5 -4.56597 | ATGGTACTTTGAACC GTCGG CGCG CTGAC TTTTTCCGGAAAGCG TERM 4828 3412506 - 3412530 + g 80 -7.2 -4.57569 | gap 1 ACCGAAGGCAAATTC CGGCAA-GAGT CTCA GCTCATTGCCG TTTTTGGAAAAATAG Dhaf_3191 3413479 - 3412823 - | hypothetical protein Dhaf_3192 3413730 - 3413533 - | hypothetical protein TERM 4829 3414001 - 3413967 - R 70 -10 -2.55104 | opp_overlap 3413971, overlap 3413966 3413965 3413974 CTTAAAACACAAACT TGAACGAGGCACTTCA TTG CGAAGCGCCTCGTTTT TCATTCCAGTAGTAA TERM 4830 3413971 - 3413997 + r 100 -12.3 -4.87291 | opp_overlap 3413967 3413966 3413965 3413974 AAACACAAACTTGAA CGAGGCACTTC ATTGC GAAGCGCCTCG TTTTTCATTCCAGTA TERM 4831 3413994 - 3413974 - R 72 -9.7 -2.77994 | opp_overlap 3413971, overlap 3413967 3413966 3413965 CACAAACTTGAACGA GGCACTTCA TTG CGAAGCGCC TCGTTTTTCATTCCA Dhaf_3194 3415619 - 3414018 - | Glucose-6-phosphate isomerase TERM 4832 3414060 - 3414045 - G 83 -4.7 -5.24129 | opp_overlap 3414054 CCCGCTCACAAAAAA TCTGC TCTCCG GCAGA GGATGCCCTGCTGCC Dhaf_3195 3419399 - 3415818 - | 4-alpha-glucanotransferase TERM 4833 3417007 - 3417034 + g 73 -9.8 -3.41636 | opp_overlap 3417012 TAGCGTTCCACCCAG GCAAAGCCCTCG CTCC CGAGGCCTTCGC TTCCTTCGCTTCCTT TERM 4834 3417253 - 3417241 - G 71 -9.1 -3.56643 | CCTAGAGGGTTCAAA GGCAG CAC CTGCC AGAGGCTTTGCCCTC TERM 4835 3418771 - 3418759 - G 74 -4.1 -5.00616 | opp_overlap 3418764 3418769 TTGCCGCCGAAAAAA TCCCA GCG TAGGA CTTCGCCCTTTTCAT TERM 4836 3419003 - 3418963 - G 82 -11.7 -3.32963 | opp_overlap 3418963, overlap 3418949 ACGGTGATTTGATAA CCGGGAGGCTCGGAGGATC GAA GCTCACCCACGCCTCCCAG TTCTTCCTGATTATT TERM 4837 3419358 - 3419342 - G 86 -13.7 -3.05384 | overlap 3419344 GGCCGCCGCATGGAA CAGCCCC AAA GGGGCTG CGGAAGAAGGGATCG TERM 4838 3419356 - 3419344 - G 72 -10.5 -3.08679 | overlap 3419342 CCGCCGCATGGAACA GCCCC AAA GGGGC TGCGGAAGAAGGGAT Dhaf_3196 3420820 - 3419417 - | glycogen/starch synthase, ADP-glucose type Dhaf_3197 3421976 - 3420858 - | glucose-1-phosphate adenylyltransferase, GlgD subunit TERM 4839 3421743 - 3421728 - G 71 -4 -4.72272 | TCCGGGGAGGAAAAA CAAACC TCCC GATTTG CGGTCCAAAGACCAG Dhaf_3198 3423187 - 3421991 - | glucose-1-phosphate adenylyltransferase TERM 4840 3422669 - 3422657 - G 71 -9.1 -3.53012 | overlap 3422665 3422666 GGGCTTTTCCTCAAA CCGGA TAA TCCGG CCCCCGGCATCCGTC TERM 4841 3422716 - 3422700 - G 71 -8.7 -3.62859 | overlap 3422692 3422693 3422701 ACCATAACTCCGAAA CGGGAAG CCT CTTCCCA AGGCACAGCAATGGC Dhaf_3199 3425660 - 3423225 - | glycogen/starch/alpha-glucan phosphorylase TERM 4842 3423953 - 3423966 + g 73 -9.5 -3.31461 | GAACCGACCCAGGAT CCGCC AACA GGCGG TTATAGAGATCCATG TERM 4843 3424747 - 3424758 + g 74 -4.4 -4.98255 | GAAAAGTCTCTGAGC GAAC CATG GTTC TTTTTGTAGTTGCGC Dhaf_3200 3427665 - 3425719 - | 1,4-alpha-glucan branching enzyme TERM 4844 3427584 - 3427546 - G 70 -2 -4.84492 | gap 3, opp_overlap 3427561, overlap 3427561 GTAACTATAATAAAA CTCACCACAATTAAAGAGA TACA TCTCTTC--TTG-GGTGAG CAAAGGGCTGTCCTT TERM 4845 3428097 - 3428122 + G 76 -2.5 -5.27335 | gap 1 GCCAAGTGGTCAACA GCGAGGT-CGTC GAT GATGTACTGCGC TTTTTCTTTGAGGGA TERM 4846 3428383 - 3428363 - g 71 -3.9 -4.81249 | opp_overlap 3428373 GTCGAAATGGAAAAA GCCGTGGAA ATG CTCCAGAGC GTTATCAATCAGGCT Dhaf_3201 3427910 - 3428434 + | transcriptional regulator, CarD family TERM 4847 3428460 - 3428514 + T 100 -19.7 -3.93695 | gap 2, opp_overlap 3428467, overlap 3428467 AAATATGCTGTACAT GAAGAAAGAGCACCGCCGGACTACTTT TGT AGAGTAG-CCGGCGCTGCTCTTT-TTC TTTATGCCTGCTGGG TERM 4848 3428508 - 3428467 - T 100 -16.7 -4.29106 | gap 1, opp_overlap 3428460 3428467 CTGTACATGAAGAAA GAGCACCGCCGGACTACTTT TGT AGAGTAG-CCGGCGCTGCTC TTTTTCTTTATGCCT TERM 4849 3428467 - 3428508 + T 100 -18.9 -5.38958 | gap 1, opp_overlap 3428467, overlap 3428460 CTGTACATGAAGAAA GAGCACCGCCGGACTACTTT TGT AGAGTAG-CCGGCGCTGCTC TTTTTCTTTATGCCT Dhaf_3202 3431870 - 3428631 - | carbamoyl-phosphate synthase, large subunit TERM 4850 3430846 - 3430820 - G 78 -12.2 -2.73443 | opp_overlap 3430823, overlap 3430819 TGACCACCACATAAT CCAGAGCCGGCT CAA AGCAGGCGCTGG TGTGACCGGTAACCG Dhaf_3203 3432966 - 3431860 - | carbamoyl-phosphate synthase, small subunit TERM 4851 3433155 - 3433117 - R 100 -14 -3.01712 | opp_overlap 3433121 3433122, overlap 3433122 GGCTTGGCTGCAACA CAAAAGCCTAATACCTGC TGG ACAGGAATCAGGCCTTTG CCACGGTTCTTTTTT TERM 4852 3433150 - 3433122 - R 100 -10.3 -4.66537 | opp_overlap 3433121 3433122, overlap 3433117 GGCTGCAACACAAAA GCCTAATACCTGC TGG ACAGGAATCAGGC CTTTGCCACGGTTCT Dhaf_3204 3433752 - 3433219 - | hypothetical protein TERM 4853 3433737 - 3433754 + g 71 -4.9 -4.49132 | CCCCCCCTGAATCTT TAATGGT GCTT ACCATTG TTCTTTTCTCTTTCC Dhaf_3205 3433930 - 3433736 - | hypothetical protein TERM 4854 3433801 - 3433814 + g 100 -6.7 -5.85244 | TGTCCAGCTTCCCAA GGATC TCCT GATCC TTTTTTCTTTTCCTT Dhaf_3206 3434625 - 3433978 - | hypothetical protein Dhaf_3207 3434960 - 3434628 - | hypothetical protein TERM 4855 3434818 - 3434806 - G 73 -7.7 -4.02707 | overlap 3434809 CAAAGAGCTAAACAA TAGGC TCC GCCTA AGAGCGCAACATAGA Dhaf_3208 3435814 - 3435020 - | hypothetical protein Dhaf_3209 3435984 - 3435814 - | hypothetical protein TERM 4856 3436231 - 3436190 - R 100 -18.1 -4.1891 | TGTTCTTAACACAAA GGCCCCTCTATCTACCGGC AGAA ACCAGCAGATAGAGGGGTC CTGAAAATTCACCCT Dhaf_3210 3437199 - 3436285 - | GCN5-related N-acetyltransferase Dhaf_3211 3439309 - 3437471 - | sulfatase Dhaf_3212 3440065 - 3439523 - | hypothetical protein TERM 4857 3439967 - 3439954 - G 70 -8.1 -3.92522 | TTTCAACCTGATAAA GCTCC AGAA GGAGC CCCTCAATATTCCTT TERM 4858 3440123 - 3440102 - R 93 -8.7 -4.46976 | opp_overlap 3440104 AGCAATAAACACAAA GAGAGCCCC ACAT AGAGCTCTC TTCACATCTCATGCA Dhaf_3213 3440487 - 3440149 - | HesB/YadR/YfhF-family protein TERM 4859 3440698 - 3440667 - R 100 -14.6 -4.96848 | opp_overlap 3440671 3440695 CCCTTTACATAAAAA CGAACTTCGGATAA TCAG CCATCCGAAGTTCG TTGCCGAAATTACTC Dhaf_3214 3442228 - 3440717 - | IMP dehydrogenase TERM 4860 3440934 - 3440950 + g 87 -5.1 -5.36441 | overlap 3440936 ACATAAGAATCGACG CCTTCCT CAA AGGAAAG TTTTTTATCTCCGCC TERM 4861 3442089 - 3442102 + g 73 -2.3 -5.09426 | ATATTCATGATGATG GAGGA TTGT TCCCC TTTTTTGAACTTAAC Dhaf_3215 3442748 - 3442317 - | protein of unknown function DUF188 Dhaf_3216 3443338 - 3442745 - | HD superfamily metal-dependent phosphohydrolase TERM 4862 3443041 - 3443030 - G 71 -7.2 -4.0648 | AAGCATATTAAATAA GCGG TCTG CCGC CTCCTGCTCCCTTTC Dhaf_3217 3444053 - 3443352 - | exsB protein Dhaf_3218 3444609 - 3444097 - | protein of unknown function DUF165 TERM 4863 3444258 - 3444242 - G 85 -10.1 -4.11484 | GCCAAGGTCGGAAAA GCGATGG AAT CCACCGC CGCAGAAACAACATT Dhaf_3219 3444832 - 3444680 - | hypothetical protein Dhaf_3220 3446829 - 3444868 - | ABC transporter related TERM 4864 3447060 - 3447028 - R 100 -9.1 -5.09173 | opp_overlap 3447031 3447033 GAATACGCGAAAAAA GCAGACCGGCTCCGT TAT AGGGAGTCGATCTAC TCTAACAATAATCTT Dhaf_3222 3449622 - 3447379 - | peptidase M56 BlaR1 TERM 4865 3447936 - 3447913 - G 71 -10.2 -2.91465 | overlap 3447912 AAGGGAAAGGTAAAT CCCGCCGGCA TTGA TGCCGGCGAT GGCACCTGAACGGCT TERM 4866 3448758 - 3448816 + g 93 -6.8 -5.40474 | gap 2 CACAGTAGAACAGAT CCGCA-GGCTT-TGGCGATGCAGTCATC ATCTC GATGAGAGTTTTGCCGTAAGCCATGCGG TTTTTTTCACCCAGT Dhaf_3223 3450001 - 3449615 - | transcriptional repressor, CopY family Dhaf_3224 3450572 - 3451804 + | peptidase T TERM 4867 3451862 - 3451823 - T 100 -17.4 -3.21276 | opp_overlap 3451828, overlap 3451828 GCCCTTCTTACAATA TAAAACCGCGTGAAATCA TCGT TGATCTCACGCGGTTTTT TCAACTCATGGTTTT TERM 4868 3451828 - 3451857 + T 100 -15.1 -5.06451 | opp_overlap 3451823 3451828 TCTTACAATATAAAA CCGCGTGAAATCA TCGT TGATCTCACGCGG TTTTTTCAACTCATG TERM 4869 3451857 - 3451828 - T 100 -17.3 -4.73682 | opp_overlap 3451828, overlap 3451823 TCTTACAATATAAAA CCGCGTGAAATCA TCGT TGATCTCACGCGG TTTTTTCAACTCATG Dhaf_3225 3452724 - 3451939 - | hypothetical protein TERM 4870 3452875 - 3452858 - R 81 -5.5 -5.18726 | opp_overlap 3452858 CGGGCATAAGAAAAA GCACCCC GGTG AGAGTGC TTGTATGTTATAATT TERM 4871 3453107 - 3453134 + r 74 -7 -4.25388 | overlap 3453109 TCAAGCGGCTGTTGC TAGGGGTCATGT TAGC GCATGACTCCTC TTTAATTTTAGTATA TERM 4872 3453109 - 3453132 + r 78 -9.6 -3.71107 | overlap 3453107 AAGCGGCTGTTGCTA GGGGTCATGT TAGC GCATGACTCC TCTTTAATTTTAGTA Dhaf_3226 3454388 - 3453210 - | major facilitator superfamily MFS_1 TERM 4873 3454148 - 3454134 - G 80 -2.8 -5.4251 | TCCATAGAGAAAAAA GGTAAT GCC ATAACC ACTAAGTCCAATTAA Dhaf_3227 3454562 - 3454801 + | hypothetical protein TERM 4874 3454807 - 3454840 + T 100 -16 -4.05446 | opp_overlap 3454807 AAGCAAGTAAGAGAA CCCCGCCCAGTCGT CAGAAT ATGACCGGGCGGGG TTTCTGCTTGCGAAA TERM 4875 3454840 - 3454807 - T 100 -16 -3.77721 | opp_overlap 3454807 AAGCAAGTAAGAGAA CCCCGCCCAGTCGT CAGAAT ATGACCGGGCGGGG TTTCTGCTTGCGAAA Dhaf_3228 3457817 - 3454881 - | D-lactate dehydrogenase (cytochrome) TERM 4876 3455426 - 3455410 - G 83 -2.2 -5.63374 | GCAATATCAAAAAAA CCTTTG CTCTC CCAAGG CATGCCACAGCAAAG TERM 4877 3455762 - 3455742 - G 91 -9.7 -4.56597 | GCGTGTGCCCAAAAA GCCATGGAC TCC ATCCACGGC ACCTAAGCCAAAGCG TERM 4878 3458123 - 3458138 + G 75 -6.1 -4.50627 | opp_overlap 3458116 AAACATCACAGCATC GCAGC AATAGG GCTGC TTTATTTCATCAGTA TERM 4879 3458412 - 3458444 + G 81 -7.8 -4.57516 | gap 1, overlap 3458415 GGTCTACCTATTTCT GGTTAATTGCC-CGG CTGA CCGAGGCAATTGGTC TTTTGATTTACATAT Dhaf_3229 3458087 - 3459919 + | histidine kinase TERM 4880 3459947 - 3459979 + T 86 -10.6 -3.89068 | opp_overlap 3459944 3459942 3459947 3459951, overlap 3459942 3459940 3459948 AAGTCCTAAAGATGA CGAAGCGCAGCAAT CTGCC ACTGCTGCGCTTCC TTGTGTCTTTTATTG TERM 4881 3459979 - 3459947 - T 91 -12.8 -2.85069 | opp_overlap 3459947 3459942 3459940 3459948, overlap 3459944 3459942 3459951 AAGTCCTAAAGATGA CGAAGCGCAGCAAT CTGCC ACTGCTGCGCTTCC TTGTGTCTTTTATTG TERM 4882 3459948 - 3459978 + T 100 -14.1 -2.91814 | opp_overlap 3459947 3459944 3459942 3459951, overlap 3459947 3459942 3459940 AGTCCTAAAGATGAC GAAGCGCAGCAAT CTGCC ACTGCTGCGCTTC CTTGTGTCTTTTATT TERM 4883 3459975 - 3459951 - T 89 -12.2 -3.3062 | opp_overlap 3459948 3459947 3459942 3459940, overlap 3459947 3459944 3459942 CCTAAAGATGACGAA GCGCAGCAAT CTGCC ACTGCTGCGC TTCCTTGTGTCTTTT Dhaf_3230 3461841 - 3459997 - | heat shock protein Hsp90 TERM 4884 3460104 - 3460092 - G 71 -4.7 -4.59773 | GGGCATTGGCAAAAA GCTGC TCA GCGGC CAGAGGAGCAAAGGA TERM 4885 3460510 - 3460521 + g 74 -4.4 -4.85782 | overlap 3460483 ATCATAGGTATAGAT GACT TCAT AGTC TTTGTTTTTAAAGAC TERM 4886 3462228 - 3462215 - g 100 -8.1 -5.71983 | CCAATTAGAAAAAAA CCTGG AACG CCAGG AACGCCTTTGGCAAG TERM 4887 3462693 - 3462679 - g 73 -7 -4.20696 | TCACCAATGTCAAAA CCCGGG GAA CCTGGG GCGAGATCCAGCTGG TERM 4888 3463279 - 3463268 - g 70 -2.2 -4.92363 | AAAGACCCAGAAAAA GCTC CAGG AAGC CAGCAACACCATCGA Dhaf_3231 3462051 - 3463400 + | protein of unknown function DUF195 TERM 4889 3463457 - 3463408 - T 100 -19.5 -4.15833 | gap 1, opp_overlap 3463408 3463414, overlap 3463414 AGGAGTAGGTCAAAA CAAAAAGCCGCTGCCCGAGGAACA TAT TGTTC-TCCGGCGGCGGCTTTCTG TCTGGTAAGCTTCTA TERM 4890 3463408 - 3463457 + T 100 -19.5 -2.81471 | gap 1, opp_overlap 3463408 3463414, overlap 3463414 AGGAGTAGGTCAAAA CAAAAAGCCGCTGCCCGAGGAACA TAT TGTTC-TCCGGCGGCGGCTTTCTG TCTGGTAAGCTTCTA TERM 4891 3463451 - 3463414 - T 100 -14.9 -5.46706 | gap 1, opp_overlap 3463408 3463414, overlap 3463408 AGGTCAAAACAAAAA GCCGCTGCCCGAGGAACA TAT TGTTC-TCCGGCGGCGGC TTTCTGTCTGGTAAG TERM 4892 3463414 - 3463451 + T 100 -17.1 -4.1523 | gap 1, opp_overlap 3463414 3463408, overlap 3463408 AGGTCAAAACAAAAA GCCGCTGCCCGAGGAACA TAT TGTTC-TCCGGCGGCGGC TTTCTGTCTGGTAAG Dhaf_3232 3466559 - 3463470 - | acriflavin resistance protein TERM 4893 3463996 - 3463970 - G 72 -10.8 -2.66008 | overlap 3463977 AAATCACGTAGATGA GGAACAAGGCGA AAA TCGCCGTGGTCC CCAGACTTCCGAAAT TERM 4894 3463989 - 3463977 - G 74 -9.1 -3.76482 | overlap 3463970 GTAGATGAGGAACAA GGCGA AAA TCGCC GTGGTCCCCAGACTT Dhaf_3233 3467634 - 3466549 - | efflux transporter, RND family, MFP subunit Dhaf_3234 3468199 - 3467624 - | transcriptional regulator, TetR family TERM 4895 3468303 - 3468287 - R 100 -10.9 -5.98675 | opp_overlap 3468287 TATAAAAAGAAAAAA GATGCAG CAG CTGCATC TTCTCCATTCATTGA TERM 4896 3468287 - 3468303 + r 83 -10.9 -3.45134 | opp_overlap 3468287 TATAAAAAGAAAAAA GATGCAG CAG CTGCATC TTCTCCATTCATTGA Dhaf_3235 3468989 - 3468312 - | hypothetical protein TERM 4897 3469025 - 3469050 + r 71 -2 -5.15167 | gap 1 TGTTCCTGGGCCGTC TGT-TTCATCT TATTC AGATGGACACA TTTTTCTTCCTGATC TERM 4898 3469294 - 3469280 - R 74 -9.2 -3.29013 | opp_overlap 3469277 3469280, overlap 3469275 ATTGTAATAACTTAA CCGGGC TTT GCCCGA TCATTGTTCTCGAAC Dhaf_3236 3471609 - 3469276 - | DNA topoisomerase TERM 4899 3470825 - 3470836 + g 74 -4.4 -4.83615 | ATCATTTGAGCGTTA TCAG TTTC CTGA TTTTTGTCACGCGTG Dhaf_3237 3471792 - 3471637 - | hypothetical protein TERM 4900 3472041 - 3472055 + G 73 -8.6 -3.85817 | opp_overlap 3472041 TTTTATGTGGAAAAA GGCAAA TTA TTTGCC TTTCTGGGGCCCAAT TERM 4901 3472055 - 3472041 - g 83 -8.6 -4.59773 | opp_overlap 3472041 TTTTATGTGGAAAAA GGCAAA TTA TTTGCC TTTCTGGGGCCCAAT TERM 4902 3472198 - 3472177 - g 71 -2.8 -4.83722 | opp_overlap 3472178, overlap 3472166 3472172 3472178 AAGAGGATAATAAAA TCCGCTCC GTGATT GGTGCGGT ATTTCAGGATGGCCT TERM 4903 3472596 - 3472583 - g 73 -9.5 -3.37354 | TATAGTGATCGACAA CGGCG AAAT CGCCG CTAAAGGAACACCCA TERM 4904 3472684 - 3472673 - g 73 -2.2 -5.02323 | overlap 3472668 TCACGACAAAGAAAA GCTA AGCA CAGC TCTTCAGGAAATGCA Dhaf_3238 3471954 - 3472868 + | ABC transporter related Dhaf_3239 3472865 - 3473719 + | ABC-2 type transporter TERM 4905 3473789 - 3473769 - f 73 -8.3 -3.66578 | overlap 3473767 3473770 GGAAATTAAATAAGA GTTCAGGGA AAA TCCCTGAAA CAAATTTTAAATACT TERM 4906 3473788 - 3473770 - f 83 -11.8 -2.78863 | overlap 3473769 3473767 GAAATTAAATAAGAG TTCAGGGA AAA TCCCTGAA ACAAATTTTAAATAC Dhaf_3240 3473821 - 3474003 + | protein of unknown function DUF1540 TERM 4907 3474048 - 3474089 + T 93 -8.7 -4.45151 | gap 1, opp_overlap 3474040 3474048 ATGCAAACACCCAAA GGGAGTGTCGCGAAGCTGCT TGA AGCAGCGGT-TGACGCTCCC TTTTCCTTAGCTATT Dhaf_3241 3474770 - 3474096 - | Abortive infection protein TERM 4908 3475069 - 3475050 - g 77 -8.6 -4.20354 | AACCCAAGTGGAAAA CGGCAAAA TTAC CTTTGCCG CCAATGAGCTGGGAA TERM 4909 3475436 - 3475466 + G 86 -12.4 -3.53343 | opp_overlap 3475434 3475435 CCGGGCTGCACAAGC GGGGCTATCGCCGC TTA GCGGGGCAAGCCCC TTTAAAAGAAACCTT Dhaf_3242 3474949 - 3476097 + | putative RNA methylase TERM 4910 3476206 - 3476176 - T 100 -13.4 -4.59089 | opp_overlap 3476176 TAATTCATAAAGAAA GATAGGGCACCT GGCTGAA AGGCGCCCTATC TTTTTTGTTTTACTC TERM 4911 3476176 - 3476206 + T 100 -11.2 -5.83211 | opp_overlap 3476176 TAATTCATAAAGAAA GATAGGGCACCT GGCTGAA AGGCGCCCTATC TTTTTTGTTTTACTC Dhaf_3243 3477610 - 3476228 - | aspartate/glutamate/uridylate kinase TERM 4912 3478120 - 3478145 + r 100 -10.5 -4.58283 | opp_overlap 3478120 GCTACTCATAGCAAA GGTGGTTCC GTCTTATG GGAACCACC TTTTTACACAGATTC TERM 4913 3478145 - 3478120 - R 86 -10.5 -3.84825 | opp_overlap 3478120 GCTACTCATAGCAAA GGTGGTTCC GTCTTATG GGAACCACC TTTTTACACAGATTC Dhaf_3244 3478802 - 3478206 - | HhH-GPD family protein Dhaf_3245 3479231 - 3478803 - | GCN5-related N-acetyltransferase TERM 4914 3479113 - 3479098 - G 76 -11.8 -2.82586 | overlap 3479095 3479093 TATACCAGAATATGA CGGGCG GCTG CGCCCG GCTCGTCATAACCAT Dhaf_3246 3479728 - 3479285 - | GCN5-related N-acetyltransferase Dhaf_3247 3481509 - 3479833 - | ABC-1 domain protein TERM 4915 3481436 - 3481413 - G 76 -8.2 -4.00684 | gap 1 AGATAAAATTAATAA GCCCCATCTCT TCC AG-GATGAGGC TGAATCCATTACGGG Dhaf_3248 3481798 - 3481502 - | hypothetical protein TERM 4916 3482121 - 3482161 + H 83 -12.2 -2.64412 | opp_overlap 3482130, overlap 3482130 AAGAGTTTACTAATG CAGCAAAAACCTTTTATC CTGGC GATAAAAGGTTTTTCTTG ATCTTTCCACTTCAA TERM 4917 3482152 - 3482130 - H 100 -9.3 -4.77157 | opp_overlap 3482130 3482121 CTAATGCAGCAAAAA CCTTTTATC CTGGC GATAAAAGG TTTTTCTTGATCTTT TERM 4918 3482130 - 3482152 + H 100 -9.3 -5.20606 | opp_overlap 3482130, overlap 3482121 CTAATGCAGCAAAAA CCTTTTATC CTGGC GATAAAAGG TTTTTCTTGATCTTT TERM 4919 3482226 - 3482212 - g 90 -2.8 -5.82172 | ATGAATAGAAAAAAA CAGG CATTCAC CCTG CTGATAACCCTATGG Dhaf_3249 3482197 - 3483165 + | periplasmic binding protein Dhaf_3250 3484624 - 3483377 - | transposase IS116/IS110/IS902 family protein TERM 4920 3483807 - 3483822 + g 73 -3.3 -4.9138 | TGCCTGATTTCTGCT TCGAT TGCCTT ATCGA TTTTCTTTACCTGCT TERM 4921 3484989 - 3485040 + H 89 -11.7 -3.54424 | gap 1, opp_overlap 3485001 CTGTGGACAGTGCCA GCCTG-TGGAAAAGCCCTTTGGGG TCTGT CCTAAAAGAGCTTTCCCAACAGGC TTTGGACAAGTCGAA Dhaf_3251 3485268 - 3486305 + | transport system permease protein Dhaf_3252 3486307 - 3487086 + | ABC transporter related TERM 4922 3487164 - 3487192 + F 72 -7.5 -3.9373 | TTATCTTATACTGAG GACAACCTGTC AGATTGC GATGGGTTGTC TTTCACTTTTGCGTC Dhaf_3253 3487231 - 3488004 + | NLP/P60 protein TERM 4923 3488144 - 3488096 - T 80 -6.5 -4.87786 | opp_overlap 3488096 GTAAGTTCATAAAAA GGGAGCATCGCCGGGCTACTGCA AAA CGTAGCTTTCAGGCAATGCTCCC TTTGCTTAAAAAGAG Dhaf_3254 3489795 - 3488206 - | peptide chain release factor 3 TERM 4924 3488762 - 3488780 + g 100 -13.2 -4.14739 | TGGGCAAAGAGCTGC TGAGGCTG AGC CAGCCTCA TTTTGCGATGGGTCC TERM 4925 3489759 - 3489770 + g 81 -5.8 -4.85782 | TAATAGCAAATGTTT TCCG GAAA CGGA TTTGTTTTTCAAGGG TERM 4926 3489928 - 3489912 - H 89 -7.3 -5.01732 | AATTCTGCGAAAAAA GGAATCA ATC TGACTCC GATGGACAGGATTTC TERM 4927 3490260 - 3490272 + G 75 -7.7 -4.15006 | opp_overlap 3490259 3490260 GGATTAATTATGAAC TTGCC ATC GGCAA TTTTGAAATGGATAT Dhaf_3255 3490022 - 3490483 + | hypothetical protein Dhaf_3256 3490635 - 3490841 + | small acid-soluble spore protein alpha/beta type TERM 4928 3490828 - 3490817 - T 78 -5.8 -4.77567 | overlap 3490825 ATTTGCAGAAGAAAA CCTC AAAA GAGG AACCCGCATCTAACC TERM 4929 3490880 - 3490863 - T 72 -9.9 -2.81173 | opp_overlap 3490863 3490855 ATTAACCTTATGAGA GGTATCC GCAA GGATACC TCTTACCATTTGGGG TERM 4930 3490863 - 3490880 + T 74 -9.9 -3.12668 | opp_overlap 3490863, overlap 3490855 ATTAACCTTATGAGA GGTATCC GCAA GGATACC TCTTACCATTTGGGG TERM 4931 3490916 - 3490940 + T 100 -13 -4.12133 | opp_overlap 3490916 3490920, overlap 3490920 GTGCTAATGATGCAA TAAAGAGCGG TTATC CCGCTCTTTA TTCTTTAGTATTTAG TERM 4932 3490940 - 3490916 - T 95 -13 -3.13164 | opp_overlap 3490916 3490920, overlap 3490920 GTGCTAATGATGCAA TAAAGAGCGG TTATC CCGCTCTTTA TTCTTTAGTATTTAG TERM 4933 3490920 - 3490936 + T 100 -9.4 -4.61162 | opp_overlap 3490920 3490916, overlap 3490916 TAATGATGCAATAAA GAGCGG TTATC CCGCTC TTTATTCTTTAGTAT TERM 4934 3490936 - 3490920 - T 85 -9.4 -4.23045 | opp_overlap 3490916 3490920, overlap 3490916 TAATGATGCAATAAA GAGCGG TTATC CCGCTC TTTATTCTTTAGTAT Dhaf_3257 3491152 - 3490952 - | hypothetical protein Dhaf_3258 3491327 - 3491500 + | hypothetical protein Dhaf_3259 3491573 - 3492295 + | protein of unknown function DUF224 cysteine-rich region domain protein Dhaf_3260 3492298 - 3493740 + | iron-sulfur cluster binding protein TERM 4935 3493795 - 3493782 - g 73 -2.3 -5.04987 | overlap 3493783 AATATCGCTAAAAAA CTGGG ACGT CCCAC TCCAACCTCTGTAGA Dhaf_3261 3493740 - 3494408 + | protein of unknown function DUF162 TERM 4936 3494480 - 3494441 - T 100 -10.8 -5.1383 | opp_overlap 3494444, overlap 3494443 3494444 AAGAATATACAAAAA CAGGGCGGGAACTCAA CTTAACCC TTGAGTTCCCGCCTTT CTTTAATAACACATC TERM 4937 3494478 - 3494443 - T 100 -13.4 -4.16832 | opp_overlap 3494444, overlap 3494441 3494444 GAATATACAAAAACA GGGCGGGAACTCAA CTTAACCC TTGAGTTCCCGCCT TTCTTTAATAACACA TERM 4938 3494477 - 3494444 - T 100 -16.9 -3.08472 | opp_overlap 3494444, overlap 3494443 3494441 AATATACAAAAACAG GGCGGGAACTCAA CTTAACCC TTGAGTTCCCGCC TTTCTTTAATAACAC TERM 4939 3494444 - 3494477 + T 100 -16.9 -4.49556 | opp_overlap 3494444 3494443 3494441 AATATACAAAAACAG GGCGGGAACTCAA CTTAACCC TTGAGTTCCCGCC TTTCTTTAATAACAC Dhaf_3262 3495115 - 3494534 - | hypothetical protein TERM 4940 3495223 - 3495198 - R 100 -14.1 -4.98857 | ATTGAACCAGAAAAA GACCCACCTAA AGCA TCAGGTGGGTC CCTGCCAAAGCATCC Dhaf_3263 3495408 - 3495253 - | hypothetical protein TERM 4941 3495516 - 3495486 - R 100 -18.5 -2.90219 | opp_overlap 3495486, overlap 3495476 3495491 CATAATCTTGACAGA TGCAAGTCGGTAC AATTA GTACCGACTTGCA TTTACCTTCCAATCT TERM 4942 3495486 - 3495516 + r 100 -18.5 -3.76393 | opp_overlap 3495486 3495476 3495491 CATAATCTTGACAGA TGCAAGTCGGTAC AATTA GTACCGACTTGCA TTTACCTTCCAATCT TERM 4943 3495511 - 3495491 - R 79 -11.2 -3.15999 | opp_overlap 3495486, overlap 3495486 3495476 TCTTGACAGATGCAA GTCGGTAC AATTA GTACCGAC TTGCATTTACCTTCC Dhaf_3264 3496211 - 3495567 - | hypothetical protein Dhaf_3265 3496636 - 3496412 - | transcriptional regulator, LuxR family TERM 4944 3497430 - 3497463 + H 100 -17.5 -5.19879 | opp_overlap 3497432 CGCCGCTTGGCTAAT GACTCCTGCCGGTTA TCTA TTGCCGGCAGGAGTC TTTTTATCTTTAGGG TERM 4945 3497461 - 3497432 - H 83 -12.2 -2.70932 | opp_overlap 3497430 CCGCTTGGCTAATGA CTCCTGCCGG TTATCTATTG CCGGCAGGAG TCTTTTTATCTTTAG Dhaf_3267 3497491 - 3497865 + | CrcB protein Dhaf_3268 3497865 - 3498221 + | CrcB protein TERM 4946 3498239 - 3498275 + T 100 -19.5 -3.76641 | opp_overlap 3498239 TTCGTCAACAAAAAA GTCGTCCTCCCCCCACT ATC AGTGGAGAGAGGACGAC TTTGGCTATTGGCCT TERM 4947 3498275 - 3498239 - T 100 -23.9 -5.4505 | opp_overlap 3498239 TTCGTCAACAAAAAA GTCGTCCTCCCCCCACT ATC AGTGGAGAGAGGACGAC TTTGGCTATTGGCCT Dhaf_3269 3499230 - 3498385 - | chain A, iron Centre cytochrome c protein Dhaf_3270 3500909 - 3499356 - | nickel-dependent hydrogenase large subunit TERM 4948 3499859 - 3499871 + g 71 -10.5 -2.84298 | opp_overlap 3499850 3499834 3499851 GCATAACCAGCATCC GGGCC AGC GGCCC TACTTCTGCAGTCTC Dhaf_3271 3501860 - 3500910 - | hydrogenase (NiFe) small subunit HydA TERM 4949 3501294 - 3501249 - G 76 -11.9 -2.74983 | gap 1, overlap 3501253 CAGATAGTATAGAAG CAAACCCACCAGCCGATCCGGT TTG ACCGGA-CAACTGGGGAGATTG ACCACCTTAACTCCT TERM 4950 3501290 - 3501253 - G 87 -11.3 -4.05245 | gap 1, overlap 3501249 TAGTATAGAAGCAAA CCCACCAGCCGATCCGGT TTG ACCGGA-CAACTGGGGAG ATTGACCACCTTAAC Dhaf_3272 3502629 - 3502246 - | hypothetical protein Dhaf_3273 3503354 - 3502656 - | protein of unknown function DUF421 TERM 4951 3503414 - 3503394 - H 100 -10.5 -4.72272 | TTTTGGGACGAAAAA GCATATGCC TGT GACATATGC CTGAATAGTCTTTCT TERM 4952 3503575 - 3503558 - H 71 -8.4 -3.42503 | CTGTAACACTTAGAA CTCGCC TTGCCC GGCGAG GATTGACGGCAACCC Dhaf_3274 3503691 - 3504002 + | SAF domain protein TERM 4953 3504420 - 3504443 + G 74 -11 -3.05715 | opp_overlap 3504408 3504413 AGAGGGAAGAGGCTC CCCTCAGTGA GCTG TCGCTGGGGG TTGAATGCGGCGGTT Dhaf_3275 3503999 - 3505156 + | Altronate dehydratase TERM 4954 3505231 - 3505186 - T 100 -17.9 -4.92363 | gap 1, opp_overlap 3505187 3505188, overlap 3505188 AAACAGGGAGAAAAA CAGGGACAGGTACCATTATTCA TAC TGAATA-TGGTACCTGTCCCCT TTTTTCACGTTAGCG TERM 4955 3505187 - 3505230 + T 100 -19.2 -5.09426 | gap 1, opp_overlap 3505186 3505188, overlap 3505188 AACAGGGAGAAAAAC AGGGACAGGTACCATTATTCA TAC TGAATA-TGGTACCTGTCCCC TTTTTTCACGTTAGC TERM 4956 3505188 - 3505229 + T 100 -22.7 -3.64933 | gap 1, opp_overlap 3505188 3505186, overlap 3505187 ACAGGGAGAAAAACA GGGACAGGTACCATTATTCA TAC TGAATA-TGGTACCTGTCCC CTTTTTTCACGTTAG TERM 4957 3505229 - 3505188 - T 100 -22.7 -4.06785 | gap 1, opp_overlap 3505187 3505188, overlap 3505186 ACAGGGAGAAAAACA GGGACAGGTACCATTATTCA TAC TGAATA-TGGTACCTGTCCC CTTTTTTCACGTTAG Dhaf_3276 3506098 - 3505241 - | peptidase M48 Ste24p Dhaf_3277 3507460 - 3506147 - | protein of unknown function DUF21 TERM 4958 3506199 - 3506215 + g 77 -10.1 -3.5393 | TCGGCACTATCCGGT GCCGGTC TCC GACTGGC TTTAACCCGGGTGAT Dhaf_3278 3507914 - 3507543 - | hypothetical protein TERM 4959 3507714 - 3507687 - G 75 -10.6 -3.28785 | gap 1, opp_overlap 3507684 3507687, overlap 3507682 3507680 GGGTAAAACAGCCAA GGCGCCGAAGATC ACA GCTCTT-GGCGCC TGATTAATACTTGAA TERM 4960 3507687 - 3507714 + g 71 -10.6 -2.81815 | gap 1, opp_overlap 3507682 3507687 3507680, overlap 3507684 GGGTAAAACAGCCAA GGCGCCGAAGATC ACA GCTCTT-GGCGCC TGATTAATACTTGAA Dhaf_3279 3508557 - 3508054 - | hypothetical protein TERM 4961 3508498 - 3508510 + g 71 -10.5 -2.86259 | opp_overlap 3508490 3508498, overlap 3508494 3508491 GAAGGAATGGAGAAA GCCCC AAA GGGGC TCATCTTCTTCACTG TERM 4962 3508510 - 3508498 - G 85 -10.5 -3.99898 | opp_overlap 3508494 3508491 3508498, overlap 3508490 GAAGGAATGGAGAAA GCCCC AAA GGGGC TCATCTTCTTCACTG Dhaf_3280 3509663 - 3508554 - | hypothetical protein Dhaf_3281 3510930 - 3509752 - | germination protein, Ger(x)C family Dhaf_3282 3512436 - 3510937 - | GerA spore germination protein TERM 4963 3512122 - 3512109 - G 81 -3.7 -5.40072 | overlap 3512110 CTCCCTCCAAAAAAA GGGCC GTCT GGCCG GATAACACCCCCTGC Dhaf_3283 3513532 - 3512426 - | spore germination protein TERM 4964 3512506 - 3512494 - G 80 -4.8 -5.04325 | CGTAAATGATAAAAA GGAG GGAAA CTCC ACATATTTCGACAAC TERM 4965 3513654 - 3513636 - R 100 -10.2 -5.4505 | GGGCGCAAGAAAAAA GCCGGCCC CCT AAGCCGGC TATCCAAAACTATTG Dhaf_3284 3515043 - 3513664 - | protein of unknown function DUF815 TERM 4966 3514773 - 3514737 - G 76 -11.5 -2.80821 | opp_overlap 3514754 3514763 3514765, overlap 3514734 3514732 CCCGCAAATAGAGCA GCTCCCGCCCGGCCA GTCGGCG CAGCCCGGCGGGAAC CCGGTCCTTTCCCTG TERM 4967 3514864 - 3514847 - G 70 -7.7 -3.81488 | CGCTCCCAAAGATAA TCAGGCC AATG AGCCTGA GTCGCCAAGGAGCAG TERM 4968 3514922 - 3514944 + g 77 -6.3 -4.56597 | ATCAGATCAAACTCC CTGCTCC CTATCCCCT GGAGCAG TTTTTGGAAAGAAAC TERM 4969 3515374 - 3515409 + H 100 -14.2 -5.75342 | gap 1, opp_overlap 3515378, overlap 3515378 CAGCGGCGACGAAGG CAAAGTCCCGACCACTT ATG AAGTGG-CGGGACTTTA TTTTTTTTAAAGGAG TERM 4970 3515405 - 3515378 - H 100 -15 -3.78329 | gap 1, opp_overlap 3515374 3515378 GGCGACGAAGGCAAA GTCCCGACCACTT ATG AAGTGG-CGGGAC TTTATTTTTTTTAAA TERM 4971 3515378 - 3515405 + H 100 -15 -5.33985 | gap 1, opp_overlap 3515378, overlap 3515374 GGCGACGAAGGCAAA GTCCCGACCACTT ATG AAGTGG-CGGGAC TTTATTTTTTTTAAA TERM 4972 3515719 - 3515701 - g 100 -6 -5.71983 | overlap 3515702 GGAAGTACAAAAAAA GGCCAT TCTCGTC ATGGCC GGAGACCACGGCGTG Dhaf_3285 3515468 - 3516574 + | nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase Dhaf_3286 3516594 - 3517208 + | Adenosylcobinamide kinase TERM 4973 3517803 - 3517818 + G 73 -7.5 -4.30719 | overlap 3517806 TTGGGTGTTGCAATG GCCGG GGATTG CCGGC TTTATTCTGGCCACC Dhaf_3287 3517210 - 3517965 + | cobalamin 5'-phosphate synthase Dhaf_3288 3519301 - 3518141 - | putative transcriptional regulator, GntR family Dhaf_3289 3519884 - 3519363 - | signal peptidase I TERM 4974 3519689 - 3519704 + g 81 -6 -4.96501 | opp_overlap 3519688 TAAACATAATGATAT CCCCAC GCTG GAGGGG TTTATTTTTGTAAAA TERM 4975 3520000 - 3519980 - R 77 -4.6 -4.93877 | opp_overlap 3519983, overlap 3519982 3519983 CCCTATCAAATAAAA GACCCCCC CGTTT GGAGGGTT AGTCCGCTATGATAT TERM 4976 3519998 - 3519982 - R 73 -7.2 -4.08958 | opp_overlap 3519983, overlap 3519980 3519983 CTATCAAATAAAAGA CCCCCC CGTTT GGAGGG TTAGTCCGCTATGAT Dhaf_3290 3521420 - 3519999 - | diguanylate cyclase Dhaf_3291 3522800 - 3521658 - | Glycerate kinase TERM 4977 3522157 - 3522167 + g 71 -4.6 -4.62783 | ATCTCCACCATCTCC GGTG TGG CGCC TTTTTGCGGTCCATA TERM 4978 3523081 - 3523108 + H 100 -9.9 -5.15634 | opp_overlap 3523081, overlap 3523052 CACTGTTGTAAGCAA GACCTTTGCCC ACAAGG GGGTGAAGGTC TTTTTTGATGCAATA TERM 4979 3523869 - 3523849 - g 85 -2.6 -5.66229 | ACCAATAAGAAAAAA GTTCTTGA AGCGG CCAAAAAC GCCGCTTAACATCAG Dhaf_3292 3523189 - 3523878 + | Integral membrane protein TerC TERM 4980 3523886 - 3523927 + F 90 -11 -3.96154 | gap 1, overlap 3523881 CCGCTTAACATCAGG GGAGCATCGCATACTGCTT TATCT AAGCAGGG-GTGATGCTCC TTATATTATTTCTTC TERM 4981 3524027 - 3524011 - f 70 -5.9 -4.29907 | overlap 3524002 ACACTACAATAGAAA TTGACTA AAA CAGTCAA TGAGGTGATGATGAT TERM 4982 3524090 - 3524073 - g 90 -7.7 -5.0916 | gap 1, overlap 3524076 TCCCGAAGATAAAAA GCAGCGGA TCA TCCGC-GC AGCCCTGGAGCACTT Dhaf_3293 3524038 - 3524640 + | transcriptional regulator, TetR family TERM 4983 3524893 - 3524903 + G 73 -5.4 -4.57341 | overlap 3524876 TCCGGGATATCCCCA TTCC GGA GGAA TTTTTGCGGGAGCTT TERM 4984 3526492 - 3526482 - g 73 -2.4 -5.06414 | CTGGCGGAACAAAAA CTGG GTT CCCG CCAAGCCAAAAGGCT Dhaf_3294 3524637 - 3527150 + | pyruvate phosphate dikinase PEP/pyruvate-binding TERM 4985 3527260 - 3527203 - f 71 -7 -4.08394 | opp_overlap 3527205 3527205, overlap 3527205 ATATTCCTGTTAAAA CATTGACCATGTTGGTCGGTTTATGC TACAAT GCAATTACCGACCAGTATGGTCAATT TCGATTAGGATGTGA TERM 4986 3527205 - 3527258 + F 100 -14 -3.76393 | opp_overlap 3527205 3527203, overlap 3527205 ATTCCTGTTAAAACA TTGACCATGTTGGTCGGTTTATGC TACAAT GCAATTACCGACCAGTATGGTCAA TTTCGATTAGGATGT TERM 4987 3527258 - 3527205 - f 78 -9.6 -3.63922 | opp_overlap 3527205 3527205, overlap 3527203 ATTCCTGTTAAAACA TTGACCATGTTGGTCGGTTTATGC TACAAT GCAATTACCGACCAGTATGGTCAA TTTCGATTAGGATGT Dhaf_3295 3527281 - 3527907 + | transcriptional regulator, TetR family Dhaf_3296 3527919 - 3528662 + | ABC transporter related Dhaf_3297 3528665 - 3530248 + | putative ABC transporter TERM 4988 3530286 - 3530328 + F 100 -17 -4.23794 | overlap 3530287 CAATCGTTGATTATG CCCGCTCAACTGCCGGTTAC TAT GGGACCGGCAGTTGAGCGCC TTTATGTTAGGTTCA TERM 4989 3530287 - 3530327 + F 100 -20.5 -3.13553 | overlap 3530286 AATCGTTGATTATGC CCGCTCAACTGCCGGTTAC TAT GGGACCGGCAGTTGAGCGC CTTTATGTTAGGTTC Dhaf_3298 3530497 - 3532617 + | putative cell wall binding repeat 2-containing protein TERM 4990 3532670 - 3532715 + T 100 -30.7 -3.66874 | opp_overlap 3532670 3532699, overlap 3532667 3532666 TAATGACATTCTAAA GGGCGTGTCGCCCTACGTTTA TGTG TAAACGCAGGGCGACACGCCC TTTCAATAAGATTAG TERM 4991 3532715 - 3532670 - T 100 -32.9 -3.65313 | opp_overlap 3532667 3532666 3532670, overlap 3532699 TAATGACATTCTAAA GGGCGTGTCGCCCTACGTTTA TGTG TAAACGCAGGGCGACACGCCC TTTCAATAAGATTAG Dhaf_3299 3533719 - 3532934 - | hypothetical protein TERM 4992 3533863 - 3533844 - R 90 -11.4 -3.70773 | CTCTATATCGAATAA GCCGCCAC TCCT GTGACGGC TAAACAATCCTTGAT Dhaf_3300 3534203 - 3533880 - | addiction module toxin, RelE/StbE family Dhaf_3301 3534454 - 3534206 - | prevent-host-death family protein TERM 4993 3534351 - 3534362 + g 83 -7.2 -4.72272 | opp_overlap 3534343 3534351 TCCATAAGCACGTAA CGGC CTCT GCCG TTTTTAGTCAAAAAA TERM 4994 3534394 - 3534379 - G 87 -5.4 -5.47218 | TTTTAGTCAAAAAAA CAGGCT CCCC AACCTG GCAGGAACGAAGAAC TERM 4995 3534690 - 3534733 + r 93 -11.2 -4.13767 | gap 1, opp_overlap 3534693 3534695 3534697 3534699, overlap 3534693 CAAAATCCCAGCCCA AT-ATACACAGGAGACTGTCA CTG TGGCAGTCCCCTGTGTATTAC TTTTCAAATGACAAA TERM 4996 3534729 - 3534693 - R 100 -18.9 -3.0634 | opp_overlap 3534690 3534693, overlap 3534695 3534697 3534699 AATCCCAGCCCAATA TACACAGGAGACTGTCA CTG TGGCAGTCCCCTGTGTA TTACTTTTCAAATGA TERM 4997 3534693 - 3534729 + r 100 -18.9 -3.68366 | opp_overlap 3534693 3534695 3534697 3534699, overlap 3534690 AATCCCAGCCCAATA TACACAGGAGACTGTCA CTG TGGCAGTCCCCTGTGTA TTACTTTTCAAATGA TERM 4998 3534727 - 3534695 - R 100 -17.1 -3.08813 | opp_overlap 3534693 3534690, overlap 3534693 3534697 3534699 TCCCAGCCCAATATA CACAGGAGACTGTCA CTG TGGCAGTCCCCTGTG TATTACTTTTCAAAT TERM 4999 3534725 - 3534697 - R 100 -13.9 -3.10245 | opp_overlap 3534693 3534690, overlap 3534695 3534693 3534699 CCAGCCCAATATACA CAGGAGACTGTCA CTG TGGCAGTCCCCTG TGTATTACTTTTCAA TERM 5000 3534723 - 3534699 - R 79 -10.7 -3.10761 | opp_overlap 3534693 3534690, overlap 3534697 3534695 3534693 AGCCCAATATACACA GGAGACTGTCA CTG TGGCAGTCCCC TGTGTATTACTTTTC Dhaf_3302 3535365 - 3534787 - | hypothetical protein TERM 5001 3535475 - 3535507 + r 83 -11.5 -2.98003 | overlap 3535472 ATCTGTGGCTTTCAA TCTCAGTTGCTTATA ATT TGTAAGCAACTGAAA TCCTTCTTCAATTTT Dhaf_3303 3536526 - 3535603 - | hypothetical protein Dhaf_3304 3537584 - 3536523 - | Radical SAM domain protein TERM 5002 3536606 - 3536626 + g 74 -11.1 -2.94099 | AGTTTTCGCAGGTTT GGCACGCCA AAA TGGCATGCC TCTGTGCTCCGGGCC Dhaf_3305 3538000 - 3537584 - | hypothetical protein TERM 5003 3537884 - 3537871 - G 77 -6.7 -4.58685 | opp_overlap 3537872 3537877 3537880, overlap 3537872 AAAGTTCTTCAAAAA TCCGA CTCA TCGGA GACGGTCCTTCGACC Dhaf_3306 3538398 - 3537997 - | hypothetical protein Dhaf_3307 3541201 - 3538412 - | hypothetical protein Dhaf_3308 3542395 - 3541214 - | beta-lactamase domain protein TERM 5004 3541360 - 3541370 + g 83 -8.2 -4.54727 | CCAACAGGTCATTTT CCGG ATG CCGG TTTTGCTTTCCGCCG TERM 5005 3542758 - 3542726 - R 100 -18.5 -4.15854 | opp_overlap 3542728 3542730, overlap 3542728 AAATCCAGCCCAAAA TACAGGGGACTGCCA CTG CGGCAGTCCCCTGTG TTCAACAAGTCATAT TERM 5006 3542728 - 3542756 + r 100 -20.4 -3.0263 | opp_overlap 3542728 3542726, overlap 3542730 ATCCAGCCCAAAATA CAGGGGACTGCC ACTGC GGCAGTCCCCTG TGTTCAACAAGTCAT TERM 5007 3542756 - 3542728 - R 100 -21.1 -3.67188 | opp_overlap 3542728 3542730, overlap 3542726 ATCCAGCCCAAAATA CAGGGGACTGCCA CTG CGGCAGTCCCCTG TGTTCAACAAGTCAT TERM 5008 3542730 - 3542754 + r 100 -17.2 -3.07013 | opp_overlap 3542728 3542726, overlap 3542728 CCAGCCCAAAATACA GGGGACTGCC ACTGC GGCAGTCCCC TGTGTTCAACAAGTC Dhaf_3309 3544613 - 3542760 - | AAA ATPase central domain protein TERM 5009 3544743 - 3544711 - R 100 -14.9 -4.07568 | opp_overlap 3544708 3544713 3544715, overlap 3544713 TTTCCCCTGCCAAAA TACAGGGGACTGCCA CTG CGACAGTCCCCTGTG TGCTACTTTTCAAAT TERM 5010 3544713 - 3544741 + r 100 -14.6 -2.92038 | opp_overlap 3544713 3544711, overlap 3544708 3544715 TCCCCTGCCAAAATA CAGGGGACTGCC ACTGC GACAGTCCCCTG TGTGCTACTTTTCAA TERM 5011 3544741 - 3544713 - R 100 -17.5 -3.63744 | opp_overlap 3544708 3544713 3544715, overlap 3544711 TCCCCTGCCAAAATA CAGGGGACTGCCA CTG CGACAGTCCCCTG TGTGCTACTTTTCAA TERM 5012 3544715 - 3544739 + r 83 -11.4 -3.00544 | opp_overlap 3544713 3544711, overlap 3544713 3544708 CCCTGCCAAAATACA GGGGACTGCC ACTGC GACAGTCCCC TGTGTGCTACTTTTC Dhaf_3310 3546572 - 3544746 - | ferredoxin TERM 5013 3545691 - 3545680 - G 83 -7.2 -4.6759 | AACACGGGAATAAAA GGCG CCGG CGCC AGATAGGTTGGGTCG Dhaf_3311 3548783 - 3546696 - | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 5014 3549102 - 3549117 + G 75 -3.2 -5.055 | CACTTTTGCTTTTAA GGGGAT TACT ATACCC TTTTTTAGCAATTGA Dhaf_3312 3549022 - 3549132 + | hypothetical protein TERM 5015 3549200 - 3549218 + F 100 -9.6 -5.26316 | TATGTGGTGGTTATT GAGGAGTT GAA AGCTCCTC TTTTTTGTGCCATCG TERM 5016 3549246 - 3549272 + F 78 -2.2 -5.56264 | TCGTATCCTTTTTTA GCTATGGGGGTA ATG TCTTTCCATGGC TTTTTTGTGTTTACA TERM 5017 3550096 - 3550084 - g 80 -4.1 -5.28942 | overlap 3550087 3550092 TATGTGAAAGAAAAA GAAGA ACG CCTTC TTAAGGAATTCCACG TERM 5018 3550107 - 3550087 - g 73 -4.7 -4.72696 | overlap 3550084 3550092 GTGAAAGAAAAAGAA GAACGCCTT CTT AAGGAATTC CACGATTACGAAGAA TERM 5019 3551047 - 3551029 - g 82 -10.2 -3.92542 | CCGACGGTCAAACAA GGCGGGAG TGA CTCCCTCC CGACCAGGGATAAAA Dhaf_3313 3549331 - 3551241 + | ABC transporter related TERM 5020 3551280 - 3551301 + T 100 -14.5 -3.91911 | opp_overlap 3551280 GTGCACATTGATAAA GGTGCGGAA AATT TTCCGCACC TTTGGTTGGCCTGAC TERM 5021 3551301 - 3551280 - T 100 -14.5 -3.95073 | opp_overlap 3551280 GTGCACATTGATAAA GGTGCGGAA AATT TTCCGCACC TTTGGTTGGCCTGAC Dhaf_3314 3552803 - 3551316 - | band 7 protein TERM 5022 3551866 - 3551887 + g 73 -3.7 -4.91852 | TTCACTTCAGCATCA TATTGCTTC TCGC GGCGCAATA TTTCTTTTTCCTGAA TERM 5023 3552201 - 3552228 + g 70 -2.1 -4.83615 | gap 1 GACGATAGCGATCCT CGGTTTACCT AAGGCTTCC AGGTA-ACCG TTTTTGTCGCGGATA TERM 5024 3554191 - 3554165 - g 71 -2.8 -4.90778 | overlap 3554173 GTGACCGAAATAAAA TCTCGAAACGCG GCA CACGGATCGGGA GAAGAATTCTGTTTA Dhaf_3315 3553147 - 3554448 + | transposase IS116/IS110/IS902 family protein Dhaf_3316 3555307 - 3554774 - | protein of unknown function DUF107 Dhaf_3317 3556012 - 3555344 - | phage shock protein A, PspA Dhaf_3318 3557067 - 3556252 - | ABC-2 type transporter TERM 5025 3556353 - 3556329 - G 80 -2.7 -5.45802 | overlap 3556332 3556333 TGCTGAAAAGAAAAA GTACCGCCAGC ACT GCCAGCAAGAC CCCCAAAGAGGGAAG Dhaf_3319 3558062 - 3557064 - | ABC transporter related TERM 5026 3557102 - 3557124 + g 83 -9.2 -4.32046 | overlap 3557099 CCTCTCTTCCGGCCA GCTTTAGGAT AGC ATCCTCAAGC TTTGGTTTTTCCACC TERM 5027 3557197 - 3557178 - G 77 -2.8 -5.27938 | opp_overlap 3557181, overlap 3557164 ATGCTCAAATAAAAA TTTCAGCA CCTG TGCCGTAA TCTCTCCCTTAGACT Dhaf_3320 3558893 - 3558084 - | ABC-2 type transporter TERM 5028 3558440 - 3558418 - G 80 -2.7 -5.40072 | gap 1, overlap 3558420 3558421 GCTTGGGCAAAAAAA GAGCCTATCG TGAT CGATAGGA-C GATAAAGGCGGTCAG TERM 5029 3558439 - 3558420 - G 74 -6.4 -4.34482 | overlap 3558418 3558421 TTGGGCAAAAAAAGA GCCTATCG TGAT CGATAGGA CGATAAAGGCGGTCA TERM 5030 3558438 - 3558421 - G 70 -9.9 -3.19966 | overlap 3558420 3558418 TGGGCAAAAAAAGAG CCTATCG TGAT CGATAGG ACGATAAAGGCGGTC TERM 5031 3558799 - 3558788 - G 85 -5.8 -5.02357 | GATAAGCAAACAAAA CCGT GTAG ACGG CACTTAAGATATTGC Dhaf_3321 3559948 - 3558896 - | transcriptional regulator, ArsR family TERM 5032 3559992 - 3560011 + H 76 -10.8 -2.65448 | overlap 3559991 3559994 3560006 GCGCTCCCCCCATTT GATTAGCC ATTC GGCTAATC CTTGATTGGATTTAG Dhaf_3322 3560174 - 3560395 + | protein of unknown function DUF1659 Dhaf_3323 3560430 - 3560672 + | hypothetical protein TERM 5033 3560722 - 3560691 - f 71 -9.3 -3.04269 | TGCAGATGAGAGATA TCCTGCGGGCGGG GGAGAT CCCGCCGGCTGAA ACCATTTACTCCTTA TERM 5034 3560738 - 3560754 + F 79 -10.8 -3.21593 | overlap 3560736 ACCATTTACTCCTTA GCGGCC ATTCA GGCCGC TCTTCTGACCGGGTC TERM 5035 3561443 - 3561433 - g 73 -2.4 -5.04385 | overlap 3561435 GAGACCGCCAAAAAA GGGG ACG CCTC GGCCGGCAAAATCGC TERM 5036 3561563 - 3561541 - g 71 -8.5 -3.74251 | GATAGCCTGACCAAA TCCTTCAAC GAGTT GCTGAAGGA GCTGACGAAATTAGC Dhaf_3324 3560842 - 3561663 + | hypothetical protein TERM 5037 3561694 - 3561715 + T 86 -7.9 -4.67697 | overlap 3561696 CTTAGCGGCCATCTC AACCGGGGC TGCC GTCCCGGTC TTTCTTATTTTCAGA TERM 5038 3561696 - 3561713 + T 89 -10.5 -3.93953 | overlap 3561694 TAGCGGCCATCTCAA CCGGGGC TGCC GTCCCGG TCTTTCTTATTTTCA Dhaf_3325 3561868 - 3561692 - | hypothetical protein Dhaf_3326 3562089 - 3562754 + | hypothetical protein TERM 5039 3562879 - 3562847 - T 100 -9.9 -5.29445 | TTGCAACAAGAAAAA GCTGGCTCCCCCTTA ATC TAAGGATAAACCAGC CAAGATCACATAAGA Dhaf_3327 3563488 - 3562907 - | hypothetical protein TERM 5040 3563260 - 3563246 - G 80 -4.2 -5.31456 | overlap 3563248 TGAATTCACAAAAAA GCTGTC GTA GACACC GCATAGGGATACTGC Dhaf_3328 3564028 - 3563597 - | hypothetical protein Dhaf_3329 3564880 - 3564116 - | hypothetical protein Dhaf_3330 3565436 - 3564870 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 5041 3565580 - 3565600 + H 72 -7.6 -3.86372 | gap 1, opp_overlap 3565580 GATCTAAAAAATTCA GCCT-GGCA TTTC TGCCCAGGC TTGTCTTTGGATTCA TERM 5042 3565779 - 3565767 - g 71 -2.6 -4.89477 | GCTGCAACAAGAAAA GCAC ACCCA GCGC CAATGACGTTCCGGC Dhaf_3331 3565694 - 3566332 + | hypothetical protein Dhaf_3332 3568086 - 3566497 - | hypothetical protein TERM 5043 3567178 - 3567196 + g 74 -4.4 -4.90302 | overlap 3567180 CGAACCAAGTCCGCT GATGCCCG TTC CGGCCACC TTTATTTTCTTAGTC Dhaf_3333 3568793 - 3568083 - | ABC transporter related TERM 5044 3568720 - 3568703 - G 79 -10.5 -3.78934 | TGGGGCCCAGAAGAA CGGCCAG CTCC CCGGCCG ACACCGAAAGATTGA TERM 5045 3569312 - 3569298 - g 80 -4.2 -5.24515 | overlap 3569300 AATAAACAAAGAAAA TATCCG TGA CGGAAA AGCACTGGCTGAGTA TERM 5046 3569310 - 3569300 - g 71 -6.8 -4.20284 | overlap 3569298 TAAACAAAGAAAATA TCCG TGA CGGA AAAGCACTGGCTGAG TERM 5047 3569486 - 3569467 - g 81 -5.7 -4.88736 | opp_overlap 3569467 3569462 TATGATTTACAAAAA GAGCACC AATCCA AGTGCTC TTTTGTAAATTCAAC Dhaf_3334 3569206 - 3569562 + | hypothetical protein TERM 5048 3569730 - 3569711 - g 71 -8.6 -3.78934 | CCTTGGGGAGAAGAA GCCTTTGC CAAA GCAAAAGC AGAAGATAAACCCAT Dhaf_3335 3569606 - 3571705 + | protein of unknown function DUF255 TERM 5049 3571718 - 3571759 + T 71 -4.5 -4.59293 | opp_overlap 3571718 3571727 TAATCCACGCAAAAA GAAGCAAAGCCGGGC ATACTATACCCA ATCCGGTTTTGCTTC TTTATTTCATCTTTA Dhaf_3336 3572856 - 3571786 - | metal dependent phosphohydrolase TERM 5050 3572629 - 3572648 + g 73 -3.6 -4.87665 | gap 1, opp_overlap 3572629 CAGATTTTCCAGAGA CGCGT-AAG CTG CTTCACGTG TTTTTATGGATACCG TERM 5051 3573183 - 3573164 - H 100 -12.2 -4.98531 | overlap 3573157 GGTGTAAATGAAAAA GCCCTTGA TTTT TCAAGGGC TTCAAAATTTCATTA Dhaf_3337 3573416 - 3573592 + | hypothetical protein TERM 5052 3573649 - 3573630 - T 100 -12.2 -5.51046 | opp_overlap 3573627 3573626 GAAAGATACAAAAAA GCCCTATC TGCT GATAGGGC TACATATTAATAATC Dhaf_3338 3573818 - 3573666 - | hypothetical protein TERM 5053 3573738 - 3573758 + g 71 -10.5 -2.84574 | opp_overlap 3573728, overlap 3573735 AATCACTTCCGGGTC GGTAAGAGG CTT TCTCTTACC TAATTGATTAAGCTC Dhaf_3339 3575097 - 3573889 - | protein of unknown function DUF111 TERM 5054 3574212 - 3574222 + g 91 -2.4 -5.90981 | GCACCGTCAGCAGTA CGGC AGG GCGG TTTTTTTTCATCTGG Dhaf_3340 3575211 - 3575639 + | CBS domain containing protein TERM 5055 3575641 - 3575653 + T 74 -6.2 -4.56597 | opp_overlap 3575641 CCTTCAAGGACTAAA GCCG CGGCC CGGC TTTTTCAAAAAAAGA TERM 5056 3575702 - 3575667 - T 89 -6.4 -5.40072 | gap 1 GCTTTTTCAAAAAAA GAGGAT-ATATGCTC TTCTCTT GAACATATCATCCTC TCCCTAAACCTGAAA Dhaf_3341 3576475 - 3575738 - | short-chain dehydrogenase/reductase SDR Dhaf_3342 3576637 - 3577632 + | Polyprenyl synthetase TERM 5057 3577634 - 3577650 + T 93 -4.4 -5.8187 | gap 1, opp_overlap 3577634, overlap 3577624 ATCGTCAAGCATAGA GGC-AGC TATA GCTTGCC TTTTTTTCTTAACTG Dhaf_3343 3578703 - 3577639 - | hypothetical protein TERM 5058 3577721 - 3577736 + g 71 -10.4 -2.75268 | overlap 3577714 3577720 GCCCTTATCAGCTCC GCGGTC ACTT GACCGC ATTCTCTGGATTTTC TERM 5059 3577878 - 3577855 - G 91 -12.5 -3.85817 | opp_overlap 3577855 AGCCGTCTCCACAAA GAGCAGCAG CCGCTC CTGCTGCTC TTTTTTTGAAGAATA TERM 5060 3577855 - 3577878 + g 100 -12.5 -5.41143 | opp_overlap 3577855 AGCCGTCTCCACAAA GAGCAGCAG CCGCTC CTGCTGCTC TTTTTTTGAAGAATA Dhaf_3344 3578874 - 3579680 + | hypothetical protein Dhaf_3345 3580206 - 3580018 - | twin-arginine translocation protein, TatA/E family subunit TERM 5061 3580396 - 3580379 - R 95 -7.7 -4.95758 | opp_overlap 3580379 3580381, overlap 3580373 AGTAGATGAGAAAAA GAGCCTG AATT CAGACTC TATCTCCACTATCGC Dhaf_3346 3581165 - 3580389 - | protein of unknown function DUF114 TERM 5062 3580639 - 3580649 + g 75 -5.4 -4.79223 | GCATATTGGTGAGAT GCTT TTA AAGC TTTTTCGTAATCTCC TERM 5063 3580858 - 3580832 - G 76 -10.8 -3.17688 | overlap 3580823 TAATCAGGGGATCAA TGGGCCCCAGCT CAG AGATGGGTCCCA TAACAACTTCATCTG TERM 5064 3581275 - 3581317 + r 100 -24.4 -3.55173 | gap 1, opp_overlap 3581284, overlap 3581275 3581284 TCTTTCCAGGCCCAT G-CCCAAGAAGCCGCCGGT CATTGC ACCGGCGGCTTCTTGGGGC TTATCGTATTATGCT TERM 5065 3581275 - 3581316 + r 100 -24.6 -2.72381 | opp_overlap 3581284, overlap 3581275 3581284 TCTTTCCAGGCCCAT GCCCAAGAAGCCGCCGGT CATTGC ACCGGCGGCTTCTTGGGG CTTATCGTATTATGC TERM 5066 3581307 - 3581284 - R 100 -15.3 -3.63515 | opp_overlap 3581275 3581275 3581284 GCCCATGCCCAAGAA GCCGCCGGT CATTGC ACCGGCGGC TTCTTGGGGCTTATC TERM 5067 3581284 - 3581307 + r 100 -15.3 -3.66028 | opp_overlap 3581284, overlap 3581275 3581275 GCCCATGCCCAAGAA GCCGCCGGT CATTGC ACCGGCGGC TTCTTGGGGCTTATC Dhaf_3347 3581651 - 3581367 - | hypothetical protein TERM 5068 3581596 - 3581585 - G 77 -3 -5.27335 | CTTGCGAAACAAAAA TGAT GCTA ATCA AAGCCACAACTAAAC Dhaf_3348 3582967 - 3581675 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 5069 3582916 - 3582882 - G 80 -9.3 -4.19817 | gap 1 CCTACGGATTTAAAA GCCCTTACCGG-AGAG TTGA CTCCGCCGGGAAGGAC GCCATTGGCCCGGGC Dhaf_3349 3583993 - 3582980 - | putative transcriptional regulator, AsnC family Dhaf_3350 3584991 - 3583993 - | Radical SAM domain protein TERM 5070 3584775 - 3584760 - G 76 -8.2 -4.07885 | CATTGGTGCCGAAAA CCGGGC GCAG GCCCAG GGAAGTGGCATAAGC Dhaf_3351 3585968 - 3584988 - | Porphobilinogen synthase Dhaf_3352 3587167 - 3585992 - | Radical SAM domain protein TERM 5071 3586318 - 3586329 + g 74 -3 -5.06103 | CTCCGTTCATGCTGA TCAA TTCC TTGA TTTTTTGAGCCTTCT Dhaf_3353 3588678 - 3587164 - | uroporphyrin-III C-methyltransferase TERM 5072 3587519 - 3587499 - G 72 -11.1 -2.52742 | overlap 3587498 3587496 ATTCGGGCAGAATAT CCCGGGC TTCTTCG GCCCGGG CCAGGAGCACACTTT Dhaf_3354 3589651 - 3588725 - | porphobilinogen deaminase Dhaf_3355 3590993 - 3589662 - | glutamyl-tRNA reductase Dhaf_3356 3591607 - 3590969 - | siroheme synthase TERM 5073 3591011 - 3591029 + g 76 -2.4 -5.26316 | gap 1, overlap 3591014 CTGCATTACTCCCTT CGCGTCG TCCAGC CGAC-CG TTTTTTATAAGCTCA Dhaf_3357 3592596 - 3591742 - | cytochrome c-type biogenesis protein CcsB Dhaf_3358 3593925 - 3592621 - | ResB family protein TERM 5074 3593532 - 3593546 + g 71 -5 -4.65263 | overlap 3593522 ACCCCTTCTTCTTAA GAACTT CCT GAGTTC TTTGTTTTAGGACAT TERM 5075 3594147 - 3594196 + r 76 -10.8 -2.64293 | gap 1, opp_overlap 3594147, overlap 3594146 3594144 TAAAGTGTCAAAAAA GGAGGCAAAGCTCTTCAACCCTG ATCAC CGGCATTGC-GAGCTTTGCCTCC CTATTCTATTCCCAA TERM 5076 3594196 - 3594147 - R 100 -11.6 -5.07107 | opp_overlap 3594147 3594146 3594144 TAAAGTGTCAAAAAA GGAGGCAAAGCTCTTCAAC-CCTG ATCA CCGGCATTGC-GAGCTTTGCCTCC CTATTCTATTCCCAA Dhaf_3359 3595168 - 3594227 - | Polysulphide reductase NrfD Dhaf_3360 3595865 - 3595191 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 5077 3595253 - 3595276 + g 85 -10.2 -4.30978 | overlap 3595272 GCGGCAGACCATTGA CTTCCGGAGC TACA GCACCGGGAG TTTTCCTCAGTTCAG TERM 5078 3596105 - 3596119 + r 74 -6.4 -4.48299 | opp_overlap 3596093 AAAGACCGAAGTCCA TCAGCT CCA GGCTGA TTTCTTTCGGTCTCA Dhaf_3361 3597162 - 3596194 - | Polyprenyl synthetase Dhaf_3362 3597607 - 3597185 - | sec-independent translocation protein mttA/Hcf106 Dhaf_3363 3598371 - 3597619 - | Sec-independent protein translocase, TatC subunit Dhaf_3364 3599252 - 3598497 - | hypothetical protein TERM 5079 3598940 - 3598929 - G 77 -3 -5.33866 | overlap 3598922 CAAACTCAGAAAAAA CTTT CCAT AAAG AAAATCTCCTACAAG TERM 5080 3599569 - 3599532 - R 100 -13 -3.70902 | opp_overlap 3599535, overlap 3599535 TTTCTGACAGCGAAA CAATAGACCTTGTAAC TTTCCC GTCACAAGGTCTATTA TGCCAGCCTTATCTC TERM 5081 3599566 - 3599535 - R 100 -12.5 -3.98913 | opp_overlap 3599535, overlap 3599532 CTGACAGCGAAACAA TAGACCTTGTAAC TTTCCC GTCACAAGGTCTA TTATGCCAGCCTTAT TERM 5082 3599535 - 3599566 + r 78 -10.3 -3.30338 | opp_overlap 3599532 3599535 CTGACAGCGAAACAA TAGACCTTGTAAC TTTCCC GTCACAAGGTCTA TTATGCCAGCCTTAT Dhaf_3365 3599988 - 3599611 - | S-adenosylmethionine decarboxylase proenzyme Dhaf_3366 3601387 - 3600239 - | amidohydrolase TERM 5083 3601710 - 3601696 - g 73 -3.4 -4.86731 | opp_overlap 3601682, overlap 3601698 GCGCTGGAAACAAAA CCCCGG GTT CCAGTG ATTTATTTAAATCTG TERM 5084 3601949 - 3601973 + G 70 -10 -3.21593 | overlap 3601947 3601950 3601952 GCGGGGTCTACTGTA CCATTGGCGG AATGA CCGCCAATGA TCTTCTCAAGGAATG TERM 5085 3601950 - 3601972 + G 84 -13.5 -2.52742 | overlap 3601949 3601947 3601952 CGGGGTCTACTGTAC CATTGGCGG AATGA CCGCCAATG ATCTTCTCAAGGAAT TERM 5086 3601952 - 3601970 + G 71 -10.3 -2.80074 | overlap 3601950 3601949 3601947 GGGTCTACTGTACCA TTGGCGG AATGA CCGCCAA TGATCTTCTCAAGGA TERM 5087 3602125 - 3602107 - g 78 -5.3 -4.86385 | gap 1 ATTGTCAAAAACAAA CCGGT-CA TCGA TGTACCGG GATGCCCGCCCATCG TERM 5088 3602465 - 3602451 - g 77 -8.6 -4.17048 | CTGCTCCGAAAATAA CTGGTA CGA TACCAG CACACCCTTTTATAC Dhaf_3367 3601552 - 3602631 + | hydrogenase (NiFe) small subunit HydA Dhaf_3368 3602652 - 3604364 + | nickel-dependent hydrogenase large subunit Dhaf_3369 3604383 - 3605105 + | Ni/Fe-hydrogenase, b-type cytochrome subunit TERM 5089 3605120 - 3605134 + T 79 -7.8 -4.25848 | opp_overlap 3605117 ACATCCATAAATGGC GGCTGT GGG GCAGCC TTTTCCTGCCGGGTT TERM 5090 3605178 - 3605161 - T 86 -11.3 -3.23899 | opp_overlap 3605160 3605157, overlap 3605156 GGTTAATGAAGTTAA GGGACAC CGAA GTGTCCC CTGCTTGTTTCTAGC Dhaf_3370 3605608 - 3605189 - | hypothetical protein TERM 5091 3605842 - 3605863 + H 100 -10.9 -5.93809 | overlap 3605811 CAGTTGTTAGCGAGA CCTTTGCCC ATCC GGGTAAAGG TTTTTTTTATGCCCG Dhaf_3371 3605960 - 3606661 + | Integral membrane protein TerC TERM 5092 3606665 - 3606707 + T 100 -15.8 -2.94411 | opp_overlap 3606666 3606668 3606672, overlap 3606668 3606672 CATGCAGCCTAGTAT ACATAAAGGAAGCGTGTC CTGCCCT GGCACGCTTCCTTTATGC CTTATTTGCCAACCT TERM 5093 3606706 - 3606666 - T 100 -17.9 -2.79915 | gap 1, opp_overlap 3606665 3606668 3606672, overlap 3606668 3606672 ATGCAGCCTAGTATA CATAAAGGAAGCGTGTCC TGCCCT GG-CACGCTTCCTTTATG CCTTATTTGCCAACC TERM 5094 3606668 - 3606704 + T 100 -16.1 -2.71101 | opp_overlap 3606668 3606666 3606672, overlap 3606665 3606672 GCAGCCTAGTATACA TAAAGGAAGCGTGTC CTGCCCT GGCACGCTTCCTTTA TGCCTTATTTGCCAA TERM 5095 3606704 - 3606668 - T 100 -14.7 -2.94747 | gap 1, opp_overlap 3606665 3606668 3606672, overlap 3606666 3606672 GCAGCCTAGTATACA TAAAGGAAGCGTGTCC TGCCCT GG-CACGCTTCCTTTA TGCCTTATTTGCCAA TERM 5096 3606672 - 3606700 + T 100 -12.5 -4.0386 | opp_overlap 3606672 3606668 3606666, overlap 3606668 3606665 CCTAGTATACATAAA GGAAGCGTGTC CTGCCCT GGCACGCTTCC TTTATGCCTTATTTG TERM 5097 3606700 - 3606672 - T 93 -11.1 -4.1523 | gap 1, opp_overlap 3606668 3606665 3606672, overlap 3606668 3606666 CCTAGTATACATAAA GGAAGCGTGTCC TGCCCT GG-CACGCTTCC TTTATGCCTTATTTG Dhaf_3372 3606980 - 3606738 - | hypothetical protein Dhaf_3373 3607596 - 3607036 - | hypothetical protein TERM 5098 3607551 - 3607571 + g 71 -3.9 -4.70169 | opp_overlap 3607551, overlap 3607558 CGCCTAACACAACCA TCAGGAGCA TGT TGCGCATGA TTTTCTTAGATCTAC Dhaf_3374 3608293 - 3607583 - | hypothetical protein TERM 5099 3608197 - 3608222 + g 73 -4.7 -4.82901 | gap 1 TTCTATCCCAAAGGT GGCTTTCCAGTT CAG AAC-GGATGGCC TTTTTGTCAAAGGAA Dhaf_3375 3608624 - 3608280 - | transcriptional regulator, PadR-like family TERM 5100 3608691 - 3608645 - R 100 -25 -3.86015 | CACTCTCCTTATAAA TATACCTTGATCATCTATGTAC ATT ATACATAGATGATCAAGGTATA GCAAGAAGATTTAAT Dhaf_3376 3609868 - 3608723 - | metallophosphoesterase TERM 5101 3609735 - 3609722 - G 80 -3.1 -5.4387 | AGATAAAGCAAAAAA CAGAT AGAT ACCTG CGTAAACCCTGGCGT Dhaf_3377 3610571 - 3610119 - | amino acid-binding ACT domain protein TERM 5102 3610661 - 3610719 + r 83 -8.7 -4.14739 | gap 5, opp_overlap 3610661 3610665 3610697 3610698, overlap 3610661 3610665 3610665 TATAGCAAGAGTGAA -----TCAAGGGGACAGGTCCCGTTTTTCA TGAA TGAAAAACGGGACCTGTCCCCTTGATTCAC TTTTGGGCTAGATGA TERM 5103 3610714 - 3610661 - R 100 -38.7 -3.21062 | opp_overlap 3610661 3610661 3610665 3610665, overlap 3610665 3610697 3610698 TATAGCAAGAGTGAA TCAAGGGGACAGGTCCCGTTTTTCA TGAA TGAAAAACGGGACCTGTCCCCTTGA TTCACTTTTGGGCTA TERM 5104 3610661 - 3610714 + r 100 -38.7 -3.37537 | opp_overlap 3610661 3610665 3610697 3610698, overlap 3610661 3610665 3610665 TATAGCAAGAGTGAA TCAAGGGGACAGGTCCCGTTTTTCA TGAA TGAAAAACGGGACCTGTCCCCTTGA TTCACTTTTGGGCTA TERM 5105 3610665 - 3610710 + r 100 -33.7 -3.45404 | opp_overlap 3610665 3610661 3610697 3610698, overlap 3610665 3610661 3610661 GCAAGAGTGAATCAA GGGGACAGGTCCCGTTTTTCA TGAA TGAAAAACGGGACCTGTCCCC TTGATTCACTTTTGG TERM 5106 3610710 - 3610665 - R 100 -33.7 -3.406 | opp_overlap 3610661 3610661 3610665 3610665, overlap 3610661 3610697 3610698 GCAAGAGTGAATCAA GGGGACAGGTCCCGTTTTTCA TGAA TGAAAAACGGGACCTGTCCCC TTGATTCACTTTTGG Dhaf_3378 3612211 - 3610727 - | stage IV sporulation protein A TERM 5107 3612599 - 3612558 - R 100 -8.2 -5.42862 | gap 1 ATATCTGCAAAAAAA GAGCACCGCCA-ACCCTTT ATTAA AAAGAGTCTGACGATACTC CCGACATTTTCCATC Dhaf_3379 3613690 - 3612632 - | Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Dhaf_3380 3614298 - 3613711 - | protein of unknown function DUF205 Dhaf_3381 3615626 - 3614301 - | small GTP-binding protein TERM 5108 3614376 - 3614364 - G 76 -9.1 -3.84719 | opp_overlap 3614361 3614364 ACCCTCAAACCCAAA GCTGC TGC GCAGC TGATTTTCCAAATAT TERM 5109 3615504 - 3615528 + g 91 -13.5 -3.30124 | opp_overlap 3615503 3615493 AGAATCCCGATAGAG CCGGTCCCGTG TCA CACCGGGCCGG TTCTCCACGATAGCC Dhaf_3382 3616947 - 3615619 - | protein of unknown function DUF512 TERM 5110 3615968 - 3615952 - G 75 -5.7 -4.60924 | overlap 3615942 CAAATCCTCGAAAAA GGGAGCC GCC GACACCC CGGTAATCAAGTGCA Dhaf_3383 3617584 - 3616949 - | hypothetical protein Dhaf_3384 3618802 - 3617615 - | cell division protein FtsW TERM 5111 3618883 - 3618856 - R 100 -13.6 -3.84825 | TCTACGGACAGCAAA TGACTTCCTGCA ACCT TGCAAGAAGTCA TACATGCCAAATGAT Dhaf_3385 3620897 - 3618912 - | hydroxymethylbutenyl pyrophosphate reductase TERM 5112 3619259 - 3619271 + g 90 -9.1 -4.62203 | TTTCAGGAGCACTTT CCCAG GGG CTGGG TTTTAATTGTTTCAG TERM 5113 3621017 - 3620992 - R 100 -4.7 -5.93809 | opp_overlap 3620995, overlap 3620996 CTCTGAGAAAAAAAA TTCATTGTCCG TTTA CGGACAAATAA TCTAGGCTTTTAATT TERM 5114 3621013 - 3620996 - R 74 -9.9 -3.07737 | opp_overlap 3620995, overlap 3620992 GAGAAAAAAAATTCA TTGTCCG TTTA CGGACAA ATAATCTAGGCTTTT Dhaf_3386 3621609 - 3621019 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 5115 3621186 - 3621209 + g 80 -4.5 -5.08824 | gap 1, overlap 3621189 GAGTTCCATTGACCC GCACAGGCAC GATGG GAGCCTG-GC TTTTTTCCATCAACA TERM 5116 3621407 - 3621390 - G 71 -4.7 -4.59853 | overlap 3621391 3621392 CCAATCTGCGAAAAA TCCCCCC CAAA AGGGGGT TGGCGAATAGTTCTT Dhaf_3387 3622304 - 3621606 - | cytidylate kinase Dhaf_3388 3623077 - 3622394 - | Abortive infection protein Dhaf_3389 3623232 - 3623513 + | hypothetical protein TERM 5117 3623595 - 3623563 - T 100 -13.6 -5.60993 | gap 1 GTGCTGAGAAAAAAA GAATGGCTGGCAGCA TAAA TGCT-CCAGCCATCC CTGAACTTGCTTAGT Dhaf_3390 3625433 - 3623628 - | L-lactate transport TERM 5118 3625610 - 3625582 - R 100 -8.3 -5.81032 | opp_overlap 3625604 3625606 TAAGCGTAAAAAAAA TAGTCAAATGATA ATA TATCATCTGGCTA GACCAGCCTTTGTTT TERM 5119 3625606 - 3625618 + r 74 -4.8 -4.79053 | opp_overlap 3625582, overlap 3625604 GATAATATATCATCT GGCT AGACC AGCC TTTGTTTTACTATTT TERM 5120 3625882 - 3625836 - R 100 -22.5 -2.60244 | opp_overlap 3625836 3625838 3625844, overlap 3625844 TGGCCAATGAATCTA CGGCAAAAGACGGCTTCTGGC TGAAT GCCAGAAGCCGTCTTTTGCTT GTTTTCAGTCTGTCT TERM 5121 3625836 - 3625883 + r 100 -24.5 -4.27259 | gap 1, opp_overlap 3625836 3625844, overlap 3625838 3625844 TGGCCAATGAATCTA C-GGCAAAAGACGGCTTCTGGC TGAAT GCCAGAAGCCGTCTTTTGCTTG TTTTCAGTCTGTCTA TERM 5122 3625838 - 3625880 + r 100 -29.5 -4.24602 | opp_overlap 3625836 3625844, overlap 3625836 3625844 GCCAATGAATCTACG GCAAAAGACGGCTTCTGGC TGAAT GCCAGAAGCCGTCTTTTGC TTGTTTTCAGTCTGT TERM 5123 3625874 - 3625844 - R 100 -21.3 -4.15453 | opp_overlap 3625838 3625836 3625844, overlap 3625836 GAATCTACGGCAAAA GACGGCTTCTGGC TGAAT GCCAGAAGCCGTC TTTTGCTTGTTTTCA TERM 5124 3625844 - 3625874 + r 100 -21.3 -4.67123 | opp_overlap 3625844 3625836, overlap 3625838 3625836 GAATCTACGGCAAAA GACGGCTTCTGGC TGAAT GCCAGAAGCCGTC TTTTGCTTGTTTTCA Dhaf_3391 3627801 - 3625930 - | L-lactate permease TERM 5125 3628400 - 3628376 - R 91 -7.2 -5.4148 | opp_overlap 3628376 3628379 GAAACAAGCAAAAAA GAACCGCTTA TATGC TAAGCAGTCC TTTTTGCACTGTCAG TERM 5126 3628497 - 3628511 + r 100 -9.2 -4.94962 | AGCATGGGTTTAAGG CTCGGC GAA GCCGGG TTTTCTTTACCTTAT Dhaf_3392 3629864 - 3628557 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 5127 3629160 - 3629133 - G 73 -4.8 -4.78107 | gap 1, overlap 3629134 CAGGACCAGGAAAAA GGCTGCAGAGGAA ATA TCCCCCGGCA-CC GCTACCTCTTGCCCG TERM 5128 3629385 - 3629408 + g 74 -11 -2.81922 | opp_overlap 3629384, overlap 3629384 3629382 AATCCCCTGTAAGAG GCCGCCTTGA ATGG TCAAGGGGGC ATATTTTCCCTCCTG Dhaf_3393 3630762 - 3629851 - | Prephenate dehydrogenase Dhaf_3394 3631790 - 3630762 - | phospho-2-dehydro-3-deoxyheptonate aldolase Dhaf_3395 3632236 - 3631871 - | chorismate mutase Dhaf_3396 3632682 - 3632254 - | HutP family protein TERM 5129 3632799 - 3632813 + r 72 -10 -2.75712 | opp_overlap 3632799, overlap 3632796 3632801 AAAGAAAACAAAAAA GACACC TAC GGTGTC TAATTCACTAAATCA TERM 5130 3632813 - 3632799 - R 100 -10 -5.95449 | opp_overlap 3632799 3632796 3632801 AAAGAAAACAAAAAA GACACC TAC GGTGTC TAATTCACTAAATCA TERM 5131 3633011 - 3632984 - R 90 -5.6 -5.48213 | gap 1 GAGCCAAAAGAAAAA GCAGG-CCCCT TTTTTCC AGAGGACCTGC TCCAGCCACACCTTA Dhaf_3397 3634193 - 3633024 - | Na+/H+ antiporter NhaA TERM 5132 3633900 - 3633890 - G 76 -8.2 -3.99352 | AACCAAGAAAGACAA GGGC TGG GCCC AGAACTCCGCCAAGG TERM 5133 3634362 - 3634335 - R 100 -10.7 -5.07941 | AAAAGCATACAAAAA GAGAGTAGTCC AAAAAG GAACTACTCTC CCCTAAGAAGTTCTA Dhaf_3398 3635143 - 3634574 - | hypothetical protein Dhaf_3399 3636495 - 3635236 - | HI0933 family protein TERM 5134 3635485 - 3635499 + g 80 -4.2 -5.20331 | AGGAAGTTCCTGCAA CACATG GAC CAGGTG TTTTCTTTCTTCTTT Dhaf_3400 3636640 - 3636948 + | hypothetical protein Dhaf_3401 3636993 - 3637376 + | hypothetical protein Dhaf_3402 3637379 - 3637747 + | hypothetical protein Dhaf_3403 3638820 - 3637777 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 5135 3638729 - 3638764 + g 77 -4.7 -4.93696 | gap 1, overlap 3638731 GCCTGATGAGGGCAA GCCTCTATGCATAACC GGCAG GGTTTAGCGTAG-GGC TTTTTAGTATTTAAA TERM 5136 3638916 - 3638892 - R 100 -9.3 -4.79683 | AACTGAGAAAAGAAA GAACAGAGCCT TTT ACGCTCTGTCC CAATACTTTCCTGTC Dhaf_3404 3639680 - 3638943 - | GntR domain protein Dhaf_3405 3640554 - 3639835 - | GntR domain protein TERM 5137 3640606 - 3640575 - R 79 -8.2 -4.08706 | gap 1, opp_overlap 3640579, overlap 3640577 3640579 CCTCCACTATAGAAA GAGATGGGAAGTAGT TTA ACTACTTCCCAT-TA TTGATTCATAATATT TERM 5138 3640605 - 3640577 - R 100 -13.3 -3.6393 | opp_overlap 3640579, overlap 3640575 3640579 TCCACTATAGAAAGA GATGGGAAGTAGT TTA ACTACTTCCCATT ATTGATTCATAATAT TERM 5139 3640603 - 3640579 - R 100 -15.9 -3.39365 | opp_overlap 3640579, overlap 3640577 3640575 CACTATAGAAAGAGA TGGGAAGTAGT TTA ACTACTTCCCA TTATTGATTCATAAT TERM 5140 3640579 - 3640603 + r 100 -15.9 -3.84246 | opp_overlap 3640579 3640577 3640575 CACTATAGAAAGAGA TGGGAAGTAGT TTA ACTACTTCCCA TTATTGATTCATAAT Dhaf_3406 3642337 - 3640673 - | L-lactate transport TERM 5141 3642751 - 3642700 - H 77 -3.9 -5.2112 | gap 1, overlap 3642702 AACATCATGAAAAAA TCCTTATAATAAGAGA-TAGGGTA GTCCT TGCCCAAATCTCAAATTATAAGGA GATAACAATGCAGGA Dhaf_3407 3642759 - 3644003 + | transposase IS4 family protein TERM 5142 3644246 - 3644225 - T 100 -14.5 -4.66537 | opp_overlap 3644229 GTTCTCAACAGAAAA GGAAGGGGA TGGC TCCCCTTCC CTTCAGGCAATCTTG Dhaf_3408 3645945 - 3644287 - | L-lactate transport TERM 5143 3646082 - 3646058 - R 100 -7.9 -5.54264 | opp_overlap 3646062, overlap 3646062 AAATAGGCAAAAAAA TAAACCCAGTC CTC AACTGGGTTTT AATTTACTGAAAGCG TERM 5144 3646062 - 3646078 + r 86 -8 -4.58773 | opp_overlap 3646058 3646062 AGGCAAAAAAATAAA CCCAGT CCTCA ACTGGG TTTTAATTTACTGAA TERM 5145 3646078 - 3646062 - R 100 -8.7 -5.21683 | opp_overlap 3646062, overlap 3646058 AGGCAAAAAAATAAA CCCAGTC CTC AACTGGG TTTTAATTTACTGAA Dhaf_3409 3646547 - 3646086 - | hypothetical protein Dhaf_3410 3646820 - 3647332 + | hypothetical protein Dhaf_3411 3648117 - 3647350 - | pseudouridine synthase TERM 5146 3647555 - 3647600 + g 77 -8.4 -4.1964 | gap 2, opp_overlap 3647557, overlap 3647549 3647557 TCATAGGTTGGCAGA GAGCCCCGGCCC-T-TTGGAGA AACT TCTCTGATACGGGCTGGGGCTG TTTTGCCATCTTCCA TERM 5147 3647557 - 3647598 + g 81 -11 -3.69449 | gap 2, opp_overlap 3647557, overlap 3647549 3647555 ATAGGTTGGCAGAGA GCCCCGGCCC-T-TTGGAGA AACT TCTCTGATACGGGCTGGGGC TGTTTTGCCATCTTC Dhaf_3412 3649556 - 3648141 - | 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein TERM 5148 3648237 - 3648211 - GR 77 -6.5 -4.56775 | overlap 3648213 ACTCGTTCCCAAAAA TCCTCCCCCCG GGAGT CGGGAAGAGCA ACCAAATAATCCCCG TERM 5149 3649400 - 3649373 - GR 100 -12 -4.84274 | overlap 3649381 TAAGCATAGGAAAAA GGACATCAGGGA AATC CCCCAGATGTCC CAGCATATTCAAAGC Dhaf_3413 3650317 - 3649526 - | glycosyl transferase family 2 TERM 5150 3649984 - 3649969 - GR 71 -9 -3.29144 | opp_overlap 3649958, overlap 3649938 3649957 TCAGCTCCGCCATAA GCGGAA TGCG TTCCGC CGGATGAGTATTATC TERM 5151 3650347 - 3650314 - GR 91 -6.9 -5.29716 | GCAACACAACAAAAA GCATACTAAGG CCTCCTTATCCT CCTTAGTATGC TCATGAACCGCTTTA Dhaf_3414 3650899 - 3650360 - | nucleoside recognition domain protein Dhaf_3415 3651477 - 3650896 - | nucleoside recognition domain protein TERM 5152 3651262 - 3651246 - G 75 -5.7 -4.58283 | overlap 3651247 TAATGGTCGGAAAAA GCCGGCG AAT CACCGGT CCAAAAAAACGGGCC Dhaf_3416 3652255 - 3651758 - | hypothetical protein Dhaf_3417 3653320 - 3652286 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 5153 3652525 - 3652515 - G 71 -8.2 -3.70076 | TTAAAGGTATCCAAA GCCG CCC CGGC AATCCGCTTTTCCCG TERM 5154 3653336 - 3653368 + r 100 -13.4 -2.94144 | gap 1, overlap 3653335 ACAGTTTTCCTGCCT TTCCTGCCCAGCCGG TAAC CCGGCAGGGC-GGAG TCATTTCCGTCCCGC Dhaf_3418 3654757 - 3653432 - | Dicarboxylate carrier MatC domain protein Dhaf_3419 3655972 - 3654794 - | peptidase M24 TERM 5155 3655232 - 3655249 + g 71 -6.3 -4.30719 | opp_overlap 3655228 3655232 CAGCAGATCAATATA GTCGTTC TCCT GAATGAC TTTATTCTGAAAGAA TERM 5156 3656321 - 3656299 - R 100 -9.2 -5.56263 | AGGATAAAACAAAAA GACGTTCCCA TCA TAGAAACGTC TCAACCTGCAGGCAA Dhaf_3420 3657128 - 3656367 - | class II aldolase/adducin family protein Dhaf_3421 3657813 - 3657199 - | two component transcriptional regulator, LuxR family TERM 5157 3657934 - 3657893 - R 100 -19.7 -4.42788 | opp_overlap 3657933, overlap 3657932 TTCAACTTCATAAAA GGCCTGTTCAAAATCGACA ACGT CGCCGATTTTAAACAGGCC CAACCGTATTGGGTT TERM 5158 3657967 - 3657994 + r 79 -3.4 -5.30155 | gap 1, opp_overlap 3657967 GCTCAGCCGAAAAAA CGGCAAGGTTGCT TAA ATCA-CCTTACCG TTTTTTAATTCCTGC TERM 5159 3657994 - 3657967 - R 82 -5.6 -5.0538 | gap 1, opp_overlap 3657967 GCTCAGCCGAAAAAA CGGCAAGGTTGCT TAA ATCA-CCTTACCG TTTTTTAATTCCTGC Dhaf_3422 3658509 - 3658060 - | sporulation protein YtfJ Dhaf_3423 3659258 - 3658608 - | hypothetical protein TERM 5160 3659393 - 3659352 - R 77 -4.6 -4.92314 | gap 2 ACGAATTTAGAAAAA GGAGTATCGC--CACTACAT AAAA ACGTAGTTTTGCGACACTCC CTTGTTACTCACAAT Dhaf_3424 3659988 - 3659398 - | chromosome segregation and condensation protein, ScpB TERM 5161 3659573 - 3659561 - G 77 -10.5 -3.54488 | opp_overlap 3659561 3659560, overlap 3659559 GTGCCGTAAAGAATA GGCCG GCC CGGCC CTTCCTTGCGTCCTA TERM 5162 3659838 - 3659850 + g 74 -9.1 -3.62096 | overlap 3659826 3659837 CCCCGCTGGCAGGTG CAGCG TAG CGCTG TTTAAGGTCATACAG Dhaf_3425 3660777 - 3659992 - | chromosome segregation and condensation protein ScpA Dhaf_3426 3661754 - 3660774 - | tryptophanyl-tRNA synthetase Dhaf_3427 3662437 - 3661793 - | peptidase M50 TERM 5163 3661856 - 3661872 + g 70 -9.5 -3.14211 | AGCGTAAAGGCCGGA TACTGCA GGC TGCAGTA TTACTCCCAAAAAGT Dhaf_3428 3665046 - 3662425 - | Polynucleotide adenylyltransferase region TERM 5164 3663947 - 3663964 + g 76 -11.3 -3.26546 | overlap 3663959 AATCCTTTGACCGGA GCATGGG CCAG CCCATGC TTGATGGCTTTATCC TERM 5165 3663985 - 3664008 + g 70 -2.2 -4.87665 | overlap 3663987 GGCTTTATCCACATC CCGGCGGGAA ATGA TGCCCACCAG TTTTTCTCCCTGAGC TERM 5166 3665138 - 3665173 + r 80 -9 -3.93383 | opp_overlap 3665141 3665146 GAAAAGGAACACCCA TAAGCAAAGCACCTCG CGAA CGAAGTGCTTTGCAGA TTTCCTGTGTATTAA TERM 5167 3665170 - 3665141 - R 100 -17.3 -3.43618 | opp_overlap 3665138, overlap 3665146 AAGGAACACCCATAA GCAAAGCACCTCG CGAA CGAAGTGCTTTGC AGATTTCCTGTGTAT TERM 5168 3665165 - 3665146 - R 86 -10 -4.0127 | opp_overlap 3665138, overlap 3665141 ACACCCATAAGCAAA GCACCTCG CGAA CGAAGTGC TTTGCAGATTTCCTG Dhaf_3429 3665526 - 3665185 - | hypothetical protein Dhaf_3430 3666957 - 3665638 - | cell envelope-related transcriptional attenuator TERM 5169 3666247 - 3666270 + g 77 -3.8 -5.10029 | gap 1 ATATTGCAAGGCCTG GGTG-CCATTG AGA CGTTGGACACC TTTTTTAAGATTGAT TERM 5170 3667186 - 3667162 - H 100 -13.7 -3.85698 | TCTGCGGCGGAGAAA GGTTGGAAACA GGA CGTTTCCAACC CGCCATTGAGAACAA Dhaf_3431 3667164 - 3667271 + | hypothetical protein TERM 5171 3667496 - 3667462 - f 71 -4.1 -4.82667 | CTATGACATGAAAAA GGCTTGGGCATGGTT TTCTT ATCCCAGCACAAGCC ACTCTCTCTACTTCG Dhaf_3432 3667550 - 3667933 + | hypothetical protein Dhaf_3433 3668944 - 3667910 - | CoA-substrate-specific enzyme activase Dhaf_3434 3670070 - 3668931 - | hypothetical protein Dhaf_3435 3671118 - 3670012 - | hypothetical protein TERM 5172 3670299 - 3670322 + gr 89 -3.2 -5.63504 | gap 1, opp_overlap 3670299 CACCCGCCCCGAAGA TCTTTTTG-GC ATG GCTCCAAAAGA TTTTTTTCTGAAGTT Dhaf_3436 3672626 - 3671133 - | GerA spore germination protein TERM 5173 3672240 - 3672214 - G 72 -10.1 -3.03159 | GTAACCCGTTCAATA TCCGGCTCACT GGGAG AGCGGGCCGGA AAACTGCGGGCATCA TERM 5174 3672246 - 3672266 + g 83 -7.5 -4.74801 | GCGGGCCGGAAAACT GCGGGCATC AAT GATGATCGC TTTTTCCTGACCTTC TERM 5175 3672561 - 3672535 - G 90 -10.2 -4.47259 | overlap 3672538 AGGACAATATCAAAA TTATCGGGAACC CCC AGTTCCCGATTA AGATAGTCCAGATTC TERM 5176 3672558 - 3672538 - G 79 -11.9 -3.18991 | overlap 3672535 ACAATATCAAAATTA TCGGGAACC CCC AGTTCCCGA TTAAGATAGTCCAGA Dhaf_3437 3673051 - 3672689 - | stage V sporulation protein AE TERM 5177 3672761 - 3672734 - G 83 -4.7 -5.18561 | CAAATAGCCAAAAAA GACCGCCGCTG CAATCC CCACGGCTGTC GCCTCGACCCCGCCT TERM 5178 3672929 - 3672919 - G 76 -8.2 -4.10657 | CGAGAGCGCCCAAAA CGGC TCC GCCG GTGACGAAGGTTACC Dhaf_3438 3674072 - 3673068 - | stage V sporulation protein AD Dhaf_3439 3674589 - 3674122 - | stage V sporulation protein AC Dhaf_3440 3674790 - 3675137 + | anti-sigma-factor antagonist Dhaf_3441 3675134 - 3675571 + | anti-sigma regulatory factor, serine/threonine protein kinase Dhaf_3442 3675582 - 3676367 + | RNA polymerase, sigma 28 subunit, SigF Dhaf_3443 3677506 - 3676364 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 5179 3676525 - 3676556 + g 100 -13.1 -4.88067 | TCACAGGCGCTTCCA CATCTGGGTTGAG CTTCGT CTCGGCCCAGATG TTTTTGTCGCTGCCT TERM 5180 3677691 - 3677646 - R 100 -15 -4.2408 | opp_overlap 3677646, overlap 3677651 TTATAAAATTATAAA GAAAATAGCCACAACCTGGT GCTGTT ACCAAGTCATGGCTATCTTC TTTTTTTCAGTTGCT TERM 5181 3677646 - 3677691 + r 91 -6.9 -5.54192 | opp_overlap 3677646 3677651 TTATAAAATTATAAA GAAAATAGCCACAACCTGGTG CTGT TACCAAGTCATGGCTATCTTC TTTTTTTCAGTTGCT TERM 5182 3677686 - 3677651 - R 100 -11.3 -5.06089 | opp_overlap 3677646, overlap 3677646 AAATTATAAAGAAAA TAGCCACAACCTGGT GCTGTT ACCAAGTCATGGCTA TCTTCTTTTTTTCAG Dhaf_3444 3678196 - 3677720 - | CoA-binding protein-like protein TERM 5183 3677935 - 3677950 + g 73 -7.6 -4.07568 | opp_overlap 3677935 3677934 CCTGACTGATAATAT TCGGAA TCGA TTCCGA TTTTAAGCAGGGGAC Dhaf_3445 3678439 - 3678744 + | addiction module antitoxin, RelB/DinJ family TERM 5184 3678924 - 3678940 + G 95 -7.9 -5.44119 | opp_overlap 3678918 GATGATGAACCATGG CGCAGCC AGG GACTGCG TTTTTTTCCGGTAGA Dhaf_3446 3678741 - 3679064 + | plasmid stabilization system TERM 5185 3679089 - 3679127 + T 100 -12.5 -4.05446 | gap 1, opp_overlap 3679093 3679096, overlap 3679093 3679096 CCGAACAGGAACTTG C-AAAGAACCCTGGCCAC AGTC GCGGCCAGGGTTCTCTCG TTTATACTTAAAGAA TERM 5186 3679093 - 3679122 + T 100 -17.9 -3.08526 | opp_overlap 3679093 3679096, overlap 3679089 3679096 ACAGGAACTTGCAAA GAACCCTGGCCAC AGTC GCGGCCAGGGTTC TCTCGTTTATACTTA TERM 5187 3679122 - 3679093 - T 100 -20.1 -3.62032 | opp_overlap 3679093 3679089 3679096, overlap 3679096 ACAGGAACTTGCAAA GAACCCTGGCCAC AGTC GCGGCCAGGGTTC TCTCGTTTATACTTA TERM 5188 3679119 - 3679096 - T 100 -16 -3.94 | opp_overlap 3679093 3679089 3679096, overlap 3679093 GGAACTTGCAAAGAA CCCTGGCCAC AGTC GCGGCCAGGG TTCTCTCGTTTATAC TERM 5189 3679096 - 3679119 + T 100 -13.8 -3.66897 | opp_overlap 3679096 3679093, overlap 3679093 3679089 GGAACTTGCAAAGAA CCCTGGCCAC AGTC GCGGCCAGGG TTCTCTCGTTTATAC Dhaf_3447 3680453 - 3679161 - | pyrimidine-nucleoside phosphorylase Dhaf_3448 3681363 - 3680530 - | purine nucleoside phosphorylase I, inosine and guanosine-specific TERM 5190 3682082 - 3682060 - R 100 -11.4 -4.40358 | ACGCAGCGGAGAAAA GTTGGAAACA GGA CGTTTCCAAC CGGCTATGAGAACAA Dhaf_3449 3683407 - 3682241 - | phosphopentomutase TERM 5191 3683170 - 3683190 + g 71 -4.6 -4.65895 | CCGTAGTGGTATCCT TGCCGGGG GAACG CTCCGCCA TTTTTCCATAACAAC Dhaf_3450 3684470 - 3683502 - | tyrosine recombinase XerD TERM 5192 3683698 - 3683711 + g 80 -4.5 -5.04385 | opp_overlap 3683698 TTTTCCTGAACACCA TGGGT TTGT GCCCA TTTTTTGAGGATATC TERM 5193 3684243 - 3684226 - G 100 -9.1 -4.69048 | AGAAAAGCAAAGAAA CCCCGCA GGGT TGCGAGG TACCGCGCCAATGTG TERM 5194 3684315 - 3684305 - G 73 -2.4 -5.08731 | GAAGAAATAAGAAAA GGTC GTT GCCC TCACAAGCTATAATG Dhaf_3451 3684773 - 3684543 - | hypothetical protein Dhaf_3452 3685584 - 3684799 - | CoA-substrate-specific enzyme activase Dhaf_3453 3686839 - 3685610 - | 2-hydroxyglutaryl-CoA dehydratase D-component Dhaf_3454 3687996 - 3686836 - | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 5195 3687787 - 3687776 - G 78 -5.8 -4.81734 | overlap 3687777 AAAGAGCAGGAAAAA GGAG GCAG CTCC CCAGGGGTCCGCTGG Dhaf_3455 3689770 - 3688019 - | AMP-dependent synthetase and ligase Dhaf_3456 3691153 - 3689915 - | acyl-CoA dehydrogenase domain protein TERM 5196 3691274 - 3691317 + r 100 -26.2 -3.85698 | opp_overlap 3691274 3691299 GATGTTAATTTAAAA GGGCCGCTGCTCAACGAACT ATAC AGTTCATTGGGCAGCGGCCC TTTGTACACACAACA TERM 5197 3691317 - 3691274 - R 100 -26.2 -4.2803 | opp_overlap 3691274, overlap 3691299 GATGTTAATTTAAAA GGGCCGCTGCTCAACGAACT ATAC AGTTCATTGGGCAGCGGCCC TTTGTACACACAACA Dhaf_3457 3691720 - 3691340 - | iron (metal) dependent repressor, DtxR family TERM 5198 3691645 - 3691657 + g 89 -3.3 -5.55769 | opp_overlap 3691646, overlap 3691646 GGGCAATATCAATGG AGCGA ATA TCGCC TTTTTTCTTCTGAAG TERM 5199 3691847 - 3691872 + r 90 -11.2 -4.03782 | gap 1, opp_overlap 3691847 TAGCATTATGAAAAA GCCGCTGACTG ATACA CAG-CAGCGGC TTTCGTTATAATGTT TERM 5200 3691872 - 3691847 - R 100 -11.2 -4.78107 | gap 1, opp_overlap 3691847 TAGCATTATGAAAAA GCCGCTGACTG ATACA CAG-CAGCGGC TTTCGTTATAATGTT Dhaf_3458 3692083 - 3691907 - | hypothetical protein Dhaf_3459 3694275 - 3692128 - | ferrous iron transport protein B TERM 5201 3693166 - 3693154 - G 76 -9.1 -3.96148 | CCGGTCCATGATAAA GGCGA TCC TCGCC ATATAACCGCATTCT Dhaf_3460 3694560 - 3694339 - | FeoA family protein Dhaf_3461 3694836 - 3694618 - | FeoA family protein TERM 5202 3695058 - 3695046 - R 100 -4.8 -6.41881 | opp_overlap 3695046 3695047, overlap 3695047 CACAATAAAAAAAAA TGCC GGGAA GGCA GCCGACCTGTATCCC TERM 5203 3695047 - 3695076 + r 72 -6.4 -4.3208 | gap 1, opp_overlap 3695046 3695047, overlap 3695046 ACAATAAAAAAAAAT GCCGGGAAGGCAG CCGAC CTGTAT-CCCGGC TTTTGCCTTCTCAGC Dhaf_3462 3695730 - 3695134 - | stage II sporulation protein M Dhaf_3463 3696985 - 3695822 - | hypothetical protein TERM 5204 3696817 - 3696798 - G 78 -12.2 -2.60075 | overlap 3696797 CCTTCGTGAAGCAAG GTGCGGAA ATCC TTCCGCAC ACCCTGCGATTGGGC Dhaf_3464 3697554 - 3696982 - | NUDIX hydrolase TERM 5205 3697503 - 3697528 + g 70 -9.6 -3.12256 | overlap 3697502 3697505 TGCATTTCTCTTCCA GTCCGGCGTC CTCAAT GGCGCCGGTC CTTTGTTGGCTGGAT TERM 5206 3697505 - 3697526 + g 76 -10.8 -3.11702 | overlap 3697503 3697502 CATTTCTCTTCCAGT CCGGCGTC CTCAAT GGCGCCGG TCCTTTGTTGGCTGG TERM 5207 3697710 - 3697689 - R 100 -15.1 -5.68023 | TTATAAGCAAAAAAA GCGGACGGC TGCA GCCGCCCGC GCAAACGTTCCTATC Dhaf_3465 3699797 - 3697725 - | secreted protein TERM 5208 3699908 - 3699918 + r 81 -4 -5.34381 | TTGCCTTATTCTCTT GTTT CAT AAAC TTTTTCTTTAAGTTT Dhaf_3466 3700263 - 3699898 - | transcriptional regulator, XRE family TERM 5209 3700512 - 3700493 - H 100 -13.6 -4.1196 | opp_overlap 3700493 AACCGATTCTCAAAA TGACGCGC ATAG GCGCGTCA TTTCCTTATACTCCG TERM 5210 3700493 - 3700512 + H 100 -13.6 -4.02108 | opp_overlap 3700493 AACCGATTCTCAAAA TGACGCGC ATAG GCGCGTCA TTTCCTTATACTCCG Dhaf_3467 3700548 - 3701402 + | diguanylate cyclase TERM 5211 3702656 - 3702621 - g 78 -6.2 -4.78157 | gap 1 ACCAAAAACAACAAA GATC-TATGGTCCGG CTTCAGC CCGGACCAAATGACC AAATGGTTCAATGAA TERM 5212 3702767 - 3702730 - g 78 -10.7 -3.36492 | opp_overlap 3702735 3702759, overlap 3702735 3702754 TTTTTAAGTCGACAA CACAAGCAGGAGAACTT GTTA AAATACCCCTGCTTATG AGCAGTGGTATCAAA TERM 5213 3702777 - 3702754 - g 81 -9.6 -4.12198 | opp_overlap 3702735 3702759, overlap 3702735 3702730 GAGAACTTGTTAAAA TACCCCTGCT TATG AGCAGTGGTA TCAAAAGAGCCTGAT Dhaf_3468 3701529 - 3702791 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 5214 3702813 - 3702863 + T 100 -11.3 -4.67697 | opp_overlap 3702814 3702817 3702820, overlap 3702814 CTTGTCTTATTAATA ACAATAACCAACAACCAAGAAGG TGTTC CCTTCAGAGTTGTTGGTTATTGC TTTATTATTTTGCCC TERM 5215 3702862 - 3702814 - T 100 -17 -3.71848 | opp_overlap 3702813 3702814, overlap 3702817 3702820 TTGTCTTATTAATAA CAATAACCAACAACCAAGAAGG TGTTC CCTTCAGAGTTGTTGGTTATTG CTTTATTATTTTGCC TERM 5216 3702814 - 3702862 + T 100 -14.8 -3.39534 | opp_overlap 3702814 3702817 3702820, overlap 3702813 TTGTCTTATTAATAA CAATAACCAACAACCAAGAAGG TGTTC CCTTCAGAGTTGTTGGTTATTG CTTTATTATTTTGCC TERM 5217 3702859 - 3702817 - T 100 -12.9 -3.99374 | opp_overlap 3702814 3702813, overlap 3702814 3702820 TCTTATTAATAACAA TAACCAACAACCAAGAAGG TGTTC CCTTCAGAGTTGTTGGTTA TTGCTTTATTATTTT TERM 5218 3702856 - 3702820 - T 91 -10.2 -4.1157 | opp_overlap 3702814 3702813, overlap 3702817 3702814 TATTAATAACAATAA CCAACAACCAAGAAGG TGTTC CCTTCAGAGTTGTTGG TTATTGCTTTATTAT Dhaf_3469 3703739 - 3702888 - | oxidoreductase anaerobic dimethyl sulfoxide reductase subunit C TERM 5219 3702942 - 3702932 - G 82 -5.4 -5.10163 | AAGCGTAAAACAAAA TTCG TCC CGAA ATCTCGCCAACCAGA TERM 5220 3703570 - 3703560 - G 71 -6.8 -4.28656 | overlap 3703562 3703567 ATGGAAGACGGAAAA GAGG AGA CCTC CCCCGACGAGAGGCA Dhaf_3470 3704302 - 3703754 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 5221 3704190 - 3704214 + g 77 -4.1 -5.14563 | opp_overlap 3704184, overlap 3704192 3704201 TCCAACTGACGGACG CGGCGCCAG CTCACGC CCGGCGCGG TTTTTTGCTCCGACA Dhaf_3471 3706642 - 3704306 - | molybdopterin oxidoreductase TERM 5222 3706212 - 3706227 + g 78 -6.1 -4.73341 | opp_overlap 3706195 CAGATCCCTTGATTG CCCAG TTCGGC CTGGG TTTCTTTAATTTTTT TERM 5223 3706561 - 3706593 + g 76 -8.3 -4.08216 | ACCCGATCCCTCCGC CGATAGCGGCGGTAG TGG CTACCGCACCAGTCG TTTTGAGAAAAGTAC Dhaf_3472 3707975 - 3706791 - | 40-residue YVTN family beta-propeller repeat protein Dhaf_3473 3708627 - 3707953 - | ABC transporter related TERM 5224 3708245 - 3708263 + g 70 -2.4 -4.90266 | GAACTCAGCCCCAGC TCTTCC AGATAGC GGGAGA TTTTTGCTTCATCCG Dhaf_3474 3709829 - 3708630 - | protein of unknown function DUF214 TERM 5225 3709382 - 3709366 - G 73 -2.1 -5.1101 | overlap 3709368 TGATTACCCAAAAAA GCCGGAA TGT TGCCGCC GATAATAACCTGGTC TERM 5226 3709461 - 3709450 - G 85 -5.8 -5.07652 | GGTTCTAAAATAAAA TCCG TCGC CGGA TCATACCCTACTAAA Dhaf_3475 3710101 - 3710205 + | hypothetical protein Dhaf_3476 3710236 - 3710382 + | hypothetical protein TERM 5227 3710395 - 3710437 + T 100 -15.7 -4.90296 | gap 1, opp_overlap 3710388 TAAAAACCGGTAGAG GGAGCATGGCAGAGCTACTT TCAG GGGTAGC-CGGCCATGCTCC TTTTTCTCCACTTTT TERM 5228 3710544 - 3710509 - T 79 -6.9 -4.59853 | gap 1, opp_overlap 3710510 3710511, overlap 3710512 CTAATCGGGCAAAAA GAAGCAGCCCAAGG TTCAAATGC CCTTGGGCTGCA-C TTCTGTACAGGACTC TERM 5229 3710511 - 3710543 + T 74 -10.6 -2.68942 | opp_overlap 3710509 3710512, overlap 3710510 AATCGGGCAAAAAGA AGCAGCCCAAGG TTCAAATGC CCTTGGGCTGCA CTTCTGTACAGGACT TERM 5230 3710542 - 3710512 - T 100 -14.1 -4.40963 | opp_overlap 3710511 3710510, overlap 3710509 ATCGGGCAAAAAGAA GCAGCCCAAGG TTCAAATGC CCTTGGGCTGC ACTTCTGTACAGGAC Dhaf_3477 3711071 - 3710580 - | hypothetical protein Dhaf_3478 3712952 - 3711168 - | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 5231 3711758 - 3711778 + g 71 -9 -3.56161 | TCACTTCGGATATGG CCTGTTCC ACACC GGAACGGG TTGTATCGTAAATTG TERM 5232 3712672 - 3712689 + g 73 -5.5 -4.64657 | overlap 3712658 3712673 CCTTCGCTCCCATAG CGCAGTC CTTT GACTGCC TTTTTAGCCGTTTCC TERM 5233 3712768 - 3712756 - G 80 -4.1 -5.18726 | overlap 3712729 TGTTTATAATAAAAA TCCAC AAG ATGGA CCGCGGTCTCCACTT TERM 5234 3713245 - 3713221 - R 100 -15.1 -5.21709 | CGGGACAGGAAAAAA CGGTGGCTTCA ATC TGAAACCACCG TCAAACTATGCTGCT Dhaf_3479 3714136 - 3713261 - | methionine aminopeptidase, type I Dhaf_3480 3714521 - 3714177 - | transcriptional regulator, AraC family TERM 5235 3714650 - 3714613 - R 100 -9.3 -4.98255 | opp_overlap 3714613 TTTTAACCATAAAAA CACCCTCCCAATCAATA GTCT TATTGATAAAAAGGGTG ATTTATTTACAGCAT TERM 5236 3714674 - 3714711 + r 71 -8.7 -3.25088 | gap 1, opp_overlap 3714685, overlap 3714667 ACAGCATTTTCGCCA TTCTTAATTTATCCGCCA CCA TGGCG-ATGAATTCAGAA TTGGTGGGTTTACCC Dhaf_3481 3715475 - 3714657 - | sporulation transcriptional activator Spo0A TERM 5237 3715750 - 3715717 - R 100 -15.5 -4.44448 | overlap 3715719 ATTATTTTAAAGAAA GACTTCCATTGAGAC CGCC GTCTCAATGGAAGTG CCAAAACTCATTGTT TERM 5238 3715748 - 3715719 - R 100 -18.1 -3.82628 | overlap 3715717 TATTTTAAAGAAAGA CTTCCATTGAGAC CGCC GTCTCAATGGAAG TGCCAAAACTCATTG Dhaf_3482 3717032 - 3715773 - | stage IV sporulation protein B TERM 5239 3716175 - 3716162 - G 87 -6.7 -5.04356 | opp_overlap 3716162 CTAAAGAACCAAAAA TACCG GACA CGGTA TTCTTCTCGATATTA TERM 5240 3717199 - 3717177 - R 100 -5.6 -5.99154 | opp_overlap 3717177 TACCAAATAAAAAAA TAGAAGGCCA AAT TCACCTTCTA TTCTATAAAATCTCC TERM 5241 3717227 - 3717246 + r 78 -2.2 -5.54894 | overlap 3717226 TCCATAATAATTCAT TTCTATAA GAGA TTATTGAA TTTTTTTCCTGAGTT Dhaf_3483 3718906 - 3717239 - | DNA repair protein RecN TERM 5242 3718607 - 3718590 - G 74 -11.3 -3.01712 | GTTCTTCCTTGAACA CGGCAGA TATT TCTGCCG CTGCGATTGATTTCA Dhaf_3484 3719389 - 3718937 - | arginine repressor, ArgR Dhaf_3485 3719967 - 3719386 - | putative rRNA methylase Dhaf_3486 3720766 - 3719960 - | ATP-NAD/AcoX kinase Dhaf_3487 3721582 - 3720773 - | hemolysin A Dhaf_3488 3723470 - 3721575 - | deoxyxylulose-5-phosphate synthase Dhaf_3489 3724053 - 3723448 - | hypothetical protein Dhaf_3490 3724520 - 3724077 - | acid phosphatase/vanadium-dependent haloperoxidase related Dhaf_3491 3725401 - 3724529 - | Polyprenyl synthetase TERM 5243 3724605 - 3724594 - G 71 -7.2 -4.07568 | overlap 3724595 CCCGCTCTCCTAAAA CCGC CAAG GCGG CATGAGCTTCATCGG Dhaf_3492 3725651 - 3725403 - | exodeoxyribonuclease VII, small subunit Dhaf_3493 3726888 - 3725677 - | exodeoxyribonuclease VII, large subunit TERM 5244 3726712 - 3726687 - G 74 -9.7 -3.51232 | overlap 3726683 GGGGGGTGAAACGAA CCCGTTCCGCA CGGC TGCGGAACATG ACCCCCTTCATGCTG TERM 5245 3726754 - 3726775 + g 83 -6.5 -4.98255 | opp_overlap 3726754 3726759 CTTTAAGGTAAAATA CCAATGTCC CGAG GGACGGTGG TTTTTGTAATTGGAA TERM 5246 3726969 - 3726955 - R 100 -9.2 -5.1166 | GAGGAAAAGCAAAAA GGGAGG TCT CCCCCC CTATCAGAACATTTT Dhaf_3494 3727923 - 3726973 - | Mg2 transporter protein CorA family protein TERM 5247 3728257 - 3728209 - R 74 -6.8 -4.26019 | gap 1, opp_overlap 3728209 3728224 CAACCATACTTAAAA TGGGAGCGTCAC-CGGCTGCTTT AAAT AAAACAGTTTTGTGACACTCCCA TGCTTAAACAACTAT Dhaf_3495 3728990 - 3728355 - | Formiminotransferase-cyclodeaminase Dhaf_3496 3729844 - 3728990 - | Methylenetetrahydrofolate dehydrogenase (NADP(+)) Dhaf_3497 3730320 - 3730042 - | hypothetical protein Dhaf_3498 3730598 - 3730819 + | transcriptional regulator, LuxR family TERM 5248 3731611 - 3731591 - g 81 -7.7 -4.51765 | TACAATTGAAAGAAA TGCTTAATA TCC CATTAAGCA CTGCAGAAAAAATGG Dhaf_3499 3731377 - 3732459 + | hypothetical protein Dhaf_3500 3732467 - 3732943 + | hypothetical protein TERM 5249 3733195 - 3733154 - T 100 -14.7 -3.66178 | gap 1, opp_overlap 3733158, overlap 3733158 TTGGGGAATTTGAAA CAAAGCAAGCCT-CCGGAGA GCT TCTCCAACAGGCTTGCTTTA TTTCTGGCCTACTAT TERM 5250 3733191 - 3733158 - T 100 -13.3 -4.46233 | gap 1, opp_overlap 3733158, overlap 3733154 GGAATTTGAAACAAA GCAAGCCT-CCGGAGA GCT TCTCCAACAGGCTTGC TTTATTTCTGGCCTA TERM 5251 3733158 - 3733191 + T 93 -8.9 -4.56367 | gap 1, opp_overlap 3733158 3733154 GGAATTTGAAACAAA GCAAGCCT-CCGGAGA GCT TCTCCAACAGGCTTGC TTTATTTCTGGCCTA Dhaf_3501 3734635 - 3733244 - | glutamate synthase (NADPH), homotetrameric Dhaf_3502 3735486 - 3734638 - | oxidoreductase FAD/NAD(P)-binding domain protein Dhaf_3503 3736515 - 3735562 - | O-sialoglycoprotein endopeptidase Dhaf_3504 3736939 - 3736493 - | NusB antitermination factor Dhaf_3505 3737541 - 3737017 - | hypothetical protein TERM 5252 3737561 - 3737599 + r 100 -14.7 -3.37556 | gap 1, overlap 3737555 3737564 GTCACCACCTTATAT TTG-TTTACCCCCCCTGG TCCA CCAGGGGGGGTAAATCCG TTCGCTTATTTTAAC TERM 5253 3737564 - 3737595 + r 100 -23.2 -2.59101 | overlap 3737561 3737555 ACCACCTTATATTTG TTTACCCCCCCTGG TCCA CCAGGGGGGGTAAA TCCGTTCGCTTATTT Dhaf_3506 3738003 - 3737605 - | protein of unknown function DUF322 Dhaf_3507 3739440 - 3738094 - | acetyl-CoA carboxylase, biotin carboxylase TERM 5254 3739226 - 3739196 - G 84 -13.4 -2.68806 | opp_overlap 3739199, overlap 3739192 3739199 TCCGATAAGAACCCA TAACCGGGGTGAAT AGC ATCCACACCGGTTA ACTCAGCAGCGCTGA TERM 5255 3739223 - 3739199 - G 79 -10.7 -3.48822 | opp_overlap 3739199, overlap 3739192 3739196 GATAAGAACCCATAA CCGGGGTGAAT AGC ATCCACACCGG TTAACTCAGCAGCGC Dhaf_3508 3741322 - 3739457 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 5256 3739637 - 3739625 - G 70 -7.7 -3.85698 | CCCCCGCTCCACAAA GGATG GAG CATCC GGTGCCGGTGAACGA TERM 5257 3739823 - 3739835 + g 100 -9.1 -4.72272 | overlap 3739807 CGCCATGGCTGGTAC GGGCA TGC TGCCC TTTTTAATGGAGACC TERM 5258 3740472 - 3740452 - G 75 -6.1 -4.59773 | opp_overlap 3740452, overlap 3740467 3740469 CTTGATGTTCAAAAA CCCGCATAT CGG AAATACGGG TGATTCCCCGTTCAA Dhaf_3509 3742123 - 3741554 - | hypothetical protein Dhaf_3510 3742680 - 3742120 - | stage III sporulation protein AG, putative TERM 5259 3742589 - 3742577 - G 71 -10.5 -2.82015 | opp_overlap 3742574 3742579 TTCATAGGCACCACA GGGGC GCT GCCCC CGCCTTTGCTATAGA Dhaf_3511 3743339 - 3742749 - | hypothetical protein Dhaf_3512 3744521 - 3743352 - | stage III sporulation protein AE Dhaf_3513 3744917 - 3744531 - | stage III sporulation protein AD TERM 5260 3744610 - 3744596 - G 73 -5.6 -4.48987 | TCGCCAGAACTAAAA CCCCCA CCT TGGCGG CGATCTCAATTTTAG Dhaf_3514 3745127 - 3744930 - | stage III sporulation protein AC Dhaf_3515 3745655 - 3745146 - | transcriptional regulator, fis family Dhaf_3516 3746737 - 3745652 - | stage III sporulation protein AA Dhaf_3517 3746878 - 3746783 - | hypothetical protein Dhaf_3518 3748682 - 3747024 - | beta-lactamase domain protein TERM 5261 3747799 - 3747775 - G 74 -10 -3.53811 | GCCATCCGTGTCAAA GCAGCCAAAG GCTCT CCCTGGCTGC CCGTGGTAAGGATAA TERM 5262 3748739 - 3748694 - R 100 -7 -5.60689 | gap 1, opp_overlap 3748708 3748724 TCATACAATAAAAAA CCCCCTCT-GGTACACCTTTT CTAAC AAAAGGTTTCCCTAAAGGAGG CATTATGATTCGGGA Dhaf_3519 3749333 - 3748776 - | translation elongation factor P Dhaf_3520 3749919 - 3749482 - | 3-dehydroquinate dehydratase, type II TERM 5263 3750026 - 3750006 - R 100 -7.6 -5.9873 | opp_overlap 3750005 TCACGACAAAAAAAA CGTAGAGA TTAGC CCTCTACG GTGGTCTTTCCCTAC TERM 5264 3750131 - 3750119 - R 80 -4.8 -5.1615 | CGAACAGCTAAAAAA CAGG CCGAT CCTG GCGCACGTCGGAGTA Dhaf_3521 3750668 - 3750111 - | Peptidoglycan-binding LysM Dhaf_3522 3751202 - 3750699 - | hypothetical protein TERM 5265 3751160 - 3751183 + g 71 -3.9 -4.67692 | GGGCACTATAGCCGA GCTTGGGAA ATTGTC TTCTTAAGC TTTCTTTCGTTTTAA Dhaf_3523 3752664 - 3751195 - | Fimbrial assembly family protein TERM 5266 3752340 - 3752357 + g 100 -4.8 -5.75342 | opp_overlap 3752340 CCGCCAAATAGCGAA GGAGCC CAGTAC GGTTCC TTTTTTTTACCCAGG Dhaf_3524 3753455 - 3752694 - | peptidase A24A domain protein Dhaf_3525 3753991 - 3753503 - | hypothetical protein Dhaf_3526 3755242 - 3754019 - | type II secretion system protein Dhaf_3527 3756289 - 3755255 - | twitching motility protein Dhaf_3528 3758066 - 3756306 - | type II secretion system protein E TERM 5267 3756579 - 3756557 - G 81 -7.7 -4.56597 | overlap 3756558 3756559 CTTTTGCCCTAAAAA CCTGCCGGA CGCTC TCCGGCAAA TCCATGGCGTCCTTT Dhaf_3529 3758370 - 3758059 - | hypothetical protein TERM 5268 3758307 - 3758339 + g 89 -6.2 -5.19275 | CTTCAGCCCCGTAGA TTGCCTGGCGTGAG TTTAC TTCCCGCCGGACAA TTTTATTTTCTGAAT Dhaf_3530 3758945 - 3758412 - | hypothetical protein Dhaf_3531 3759363 - 3758980 - | hypothetical protein Dhaf_3532 3759698 - 3759360 - | general secretion pathway protein G TERM 5269 3759940 - 3759922 - R 100 -11 -5.77988 | opp_overlap 3759922 AGAGATATAAAAAAA CCACGACT CAT AGCCGTGG TTTTCCCTTAATTTG TERM 5270 3759922 - 3759940 + r 86 -8.8 -4.33808 | opp_overlap 3759922 AGAGATATAAAAAAA CCACGACT CAT AGCCGTGG TTTTCCCTTAATTTG Dhaf_3533 3761050 - 3759968 - | 3-dehydroquinate synthase TERM 5271 3760488 - 3760518 + g 75 -7.7 -4.15044 | opp_overlap 3760488 TCGGCAATGACAGCA TGCTTGATAGTCT CTGCC AGACCATTAAGCA TTTCTTCCCAGGGCA Dhaf_3534 3761654 - 3761031 - | Shikimate kinase TERM 5272 3761486 - 3761472 - G 75 -7.8 -4.2461 | ATCCGTATCAATAAA CTCCCG TCC CAGGAG CTTGGCCAAACGCCT Dhaf_3535 3762804 - 3761656 - | Chorismate synthase Dhaf_3536 3763292 - 3762816 - | hypothetical protein TERM 5273 3763215 - 3763192 - G 73 -4.5 -4.68539 | overlap 3763196 ATCAAAAGCACAAAA CCCACCCCT GCCAGG AGGGTTAGG ACCAGAAGCACCTCA Dhaf_3537 3764261 - 3763374 - | shikimate 5-dehydrogenase TERM 5274 3764251 - 3764225 - G 75 -11.7 -2.62263 | opp_overlap 3764228, overlap 3764228 AGCTTTTGGATAGCA CAACGGAATGG TTTTC CCATTCCGTTA TCGTCATCATACAGT TERM 5275 3764248 - 3764228 - G 79 -11.2 -3.46602 | opp_overlap 3764228, overlap 3764225 TTTTGGATAGCACAA CGGAATGG TTTTC CCATTCCG TTATCGTCATCATAC TERM 5276 3764228 - 3764248 + g 79 -11.2 -3.45023 | opp_overlap 3764228 3764225 TTTTGGATAGCACAA CGGAATGG TTTTC CCATTCCG TTATCGTCATCATAC Dhaf_3538 3764804 - 3764274 - | HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 TERM 5277 3764861 - 3764841 - H 72 -9.7 -2.80816 | opp_overlap 3764838 TTTTTACTTATTATA TCCCAGAGT TCT ACTCTGGGC AAGTTAAATGGAAGA TERM 5278 3765096 - 3765139 + G 73 -3.2 -4.88405 | overlap 3765085 TGCTCCAGCTTTTAC GGCTGGTATCTTG-ATCGGC GCATCA GCCGGCGCAAGAT-CCACCC TTTTGTTTGCAAATT TERM 5279 3765201 - 3765211 + G 71 -4 -4.67048 | CTCAAAGATTTTTCT TCAT TTA ATGA TTTCTTTTACCGTAA Dhaf_3539 3764949 - 3765845 + | phosphatidylserine decarboxylase TERM 5280 3765830 - 3765820 - T 71 -2.4 -5.24129 | opp_overlap 3765826 TTTTCGGAGAAAAAA TCGG TGT CCGC CATAAGGGCCGATAA Dhaf_3540 3766218 - 3765883 - | branched-chain amino acid transport TERM 5281 3765993 - 3766029 + g 74 -10.8 -2.92111 | gap 1, opp_overlap 3765982, overlap 3765990 TAAACCCGATGGCAA TCCCTTCCGGCAGC-CC ATAA GGAGCAGCCAGGAGGGA TACATTTTTTAGACA Dhaf_3541 3767018 - 3766215 - | AzlC family protein TERM 5282 3766603 - 3766586 - G 71 -6.3 -4.25873 | opp_overlap 3766601, overlap 3766593 TCGTCACAAAAAACA TGAACCA GCCA CGGTTCA CTCCCTGGGGAGGAT TERM 5283 3766929 - 3766914 - G 73 -10.4 -3.11784 | opp_overlap 3766912, overlap 3766912 3766911 3766908 ACCAAGAAATAAGTA GCCGGT CATT ACCGGC AATGTATAGGGAAAC Dhaf_3542 3767523 - 3767050 - | transcriptional regulator, AsnC family TERM 5284 3767701 - 3767679 - R 93 -9.1 -4.51743 | opp_overlap 3767679, overlap 3767655 CTATCATTAAAGAAA GCTGCCCTA AATCA TCGGGCAGC TTTATGCTTTACAGG TERM 5285 3767679 - 3767701 + r 83 -9.1 -4.13654 | opp_overlap 3767655 3767679 CTATCATTAAAGAAA GCTGCCCTA AATCA TCGGGCAGC TTTATGCTTTACAGG Dhaf_3543 3768676 - 3767765 - | Phosphate butyryltransferase TERM 5286 3768603 - 3768589 - G 71 -5 -4.59773 | opp_overlap 3768589 CCTTAGCCTTAAAAA CTGCTT CTA AAACAG GTTTATCGTGGGCCG Dhaf_3544 3769768 - 3768680 - | butyrate kinase Dhaf_3545 3770987 - 3769806 - | acetyl-CoA acetyltransferase TERM 5287 3771147 - 3771126 - R 81 -4.3 -5.36441 | opp_overlap 3771126 TTTTTATATAAAAAA GCCCTCAGA AAAT TCTTTGGGC TCATTTGTCTTTATA Dhaf_3546 3771961 - 3771212 - | RNA polymerase, sigma 28 subunit, SigK TERM 5288 3772134 - 3772120 - R 100 -4.2 -6.22802 | CGCTACAAAAAAAAA TGACCC TTC AGGCCA TTTTTCAATGCAAAT Dhaf_3547 3772769 - 3772167 - | hypothetical protein Dhaf_3548 3773358 - 3772816 - | Fimbrial assembly family protein Dhaf_3549 3774420 - 3773359 - | Tfp pilus assembly protein ATPase PilM-like protein Dhaf_3550 3775772 - 3774462 - | Ig domain protein group 2 domain protein TERM 5289 3774763 - 3774752 - G 91 -7.2 -5.31275 | TTCCATCAGAAAAAA GGGC TGTC GCCC TAAATGTAACCTTTT Dhaf_3551 3776308 - 3775754 - | hypothetical protein Dhaf_3552 3776661 - 3776305 - | hypothetical protein Dhaf_3553 3777206 - 3776691 - | hypothetical protein Dhaf_3554 3778427 - 3777222 - | type II secretion system protein TERM 5290 3777306 - 3777290 - G 73 -5.1 -4.56597 | overlap 3777302 TGCCCCCGGCAAAAA TACCGAT AAT AACGGTA AATACCGGTTCCACC Dhaf_3555 3780192 - 3778471 - | type II secretion system protein E TERM 5291 3780297 - 3780317 + r 74 -9.8 -3.22951 | opp_overlap 3780297, overlap 3780295 GCCAGTATGACAAAA GGGTGTTT AGCGC AAACACCC TCTTGTCACGATATC TERM 5292 3780317 - 3780297 - R 100 -10.5 -4.4891 | opp_overlap 3780297 3780295 GCCAGTATGACAAAA GGGTGTTTA GCG CAAACACCC TCTTGTCACGATATC Dhaf_3556 3780801 - 3780340 - | hypothetical protein Dhaf_3557 3781214 - 3780984 - | hypothetical protein Dhaf_3558 3782564 - 3781272 - | peptidase U32 TERM 5293 3781399 - 3781421 + g 79 -10.6 -3.7282 | TCTACCGTGTGAATG CCTTTGACCT CAA AGGTCCAAGG TTCTTCATGAGGTGA Dhaf_3559 3783733 - 3782708 - | aminodeoxychorismate lyase TERM 5294 3783770 - 3783817 + r 100 -13.4 -3.06133 | opp_overlap 3783778 3783808, overlap 3783775 TCCTGTATTTATCAC TGGATTAACCTTCAGTGGGGGG TGAA TCCCCCACTGAAGGACGTTCCG TTCAATGAACCCTTA TERM 5295 3783775 - 3783812 + r 93 -12.7 -3.19192 | opp_overlap 3783778 3783808, overlap 3783770 TATTTATCACTGGAT TAACCTTCAGTGGGGGG TGAA TCCCCCACTGAAGGACG TTCCGTTCAATGAAC TERM 5296 3783809 - 3783778 - R 100 -20.3 -3.17212 | opp_overlap 3783775 3783770, overlap 3783808 TTATCACTGGATTAA CCTTCAGTGGGGG GTGAAT CCCCCACTGAAGG ACGTTCCGTTCAATG Dhaf_3560 3785182 - 3783875 - | VanW family protein TERM 5297 3785304 - 3785272 - R 100 -7.8 -5.95286 | gap 1 AGCAAAAATAAAAAA GCAGCCG-ATTCGAT ATTC ACCGAACCCGACTGC TTTAAACAGCTGGTT Dhaf_3561 3785626 - 3785321 - | protein of unknown function DUF1292 Dhaf_3562 3786141 - 3785713 - | Holliday junction resolvase YqgF TERM 5298 3785785 - 3785773 - G 73 -5.5 -4.64861 | opp_overlap 3785773 CCCCTGTAAAATAAA GACGG CTG CCATC TTATCGATCACTTGC TERM 5299 3786214 - 3786195 - R 81 -7.2 -4.66163 | gap 1 ATTTTCAGGCAAAAA TGCGGACAG ACT CT-TCCGCA ATACCCACAAAGGAC Dhaf_3563 3787120 - 3786173 - | aldo/keto reductase TERM 5300 3787185 - 3787158 - R 100 -15 -2.87132 | opp_overlap 3787162, overlap 3787162 TCCCTTTCTCACACA GAAACCCTCACC TTGA AGTGAGGGTTTC CTAAAAATTACTTCT TERM 5301 3787181 - 3787162 - R 88 -10 -4.12532 | opp_overlap 3787162, overlap 3787158 TTTCTCACACAGAAA CCCTCACC TTGA AGTGAGGG TTTCCTAAAAATTAC TERM 5302 3787162 - 3787181 + r 81 -9.3 -3.74747 | opp_overlap 3787162 3787158 TTTCTCACACAGAAA CCCTCAC CTTGAA GTGAGGG TTTCCTAAAAATTAC Dhaf_3564 3787444 - 3787193 - | protein of unknown function DUF965 Dhaf_3565 3790169 - 3787542 - | alanyl-tRNA synthetase TERM 5303 3788254 - 3788243 - G 71 -7.2 -4.07687 | overlap 3788244 ATTTTTCTCCGAAAA GGGC CGTG GCCC CGCTGGCCTTCGCCG TERM 5304 3789137 - 3789147 + g 74 -4 -4.94058 | overlap 3789132 GCAGATGATTGAGGA TGAA GTT TTCA TTTTCTTTAAGTTCG TERM 5305 3790234 - 3790211 - R 100 -11 -4.38876 | gap 1, opp_overlap 3790211, overlap 3790203 TTAAAAATAGATAAA CCCGCCCCCTG AAT CAGGG-ACGGG TTAAATTACCGTGGT TERM 5306 3790535 - 3790578 + r 83 -9.6 -4.03413 | opp_overlap 3790536 3790537, overlap 3790538 ATCATTCACTCCAAA ACCTGTCCAAGAACACGACA ACGT TGTCGCGTTCTTGGACATCC TTTGTGTACGGCCCT TERM 5307 3790577 - 3790536 - R 100 -15.3 -4.14739 | opp_overlap 3790535 3790538, overlap 3790537 TCATTCACTCCAAAA CCTGTCCAAGAACACGACA ACGT TGTCGCGTTCTTGGACATC CTTTGTGTACGGCCC TERM 5308 3790576 - 3790537 - R 100 -18.8 -3.08522 | opp_overlap 3790535 3790538, overlap 3790536 CATTCACTCCAAAAC CTGTCCAAGAACACGACA ACGT TGTCGCGTTCTTGGACAT CCTTTGTGTACGGCC TERM 5309 3790538 - 3790575 + r 100 -20.1 -3.06418 | opp_overlap 3790537 3790536, overlap 3790535 ATTCACTCCAAAACC TGTCCAAGAACACGACA ACGT TGTCGCGTTCTTGGACA TCCTTTGTGTACGGC Dhaf_3566 3792779 - 3790593 - | Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein TERM 5310 3790720 - 3790706 - G 77 -2.8 -5.24129 | CGGCCGCATAAAAAA TCCC TTCCCCC GGGA AAACTGTCCTTATTA Dhaf_3567 3794402 - 3793836 - | hypothetical protein Dhaf_3568 3795853 - 3794609 - | transposase IS4 family protein TERM 5311 3794730 - 3794743 + g 77 -4.5 -4.83615 | TTGGCAGCTTTCCTT CTTCG TCGT CGGAG TTTTTCTAAAAACTC TERM 5312 3795862 - 3795913 + r 84 -3.9 -5.46276 | gap 1, opp_overlap 3795861, overlap 3795901 CCTGCATTTTAAATC TCCTTATAATTTGAGATTTGGGCA AGGAC TACCCTA-TCTCTTATTATAAGGA TTTTTTATGTGTATT TERM 5313 3795971 - 3795994 + r 72 -7.6 -3.8297 | ATTTCGGGTCTATTT GCTTAAATTT AGCT AAATTTGAGC TTTGACATTTTTGTT TERM 5314 3796083 - 3796046 - R 100 -15.3 -3.26042 | opp_overlap 3796046 3796051, overlap 3796051 TGAGTTAAAAATAAG CAAAATTAAATGCTAGT TGTA ACTAGCATTTAATTTTA TGATTGATGATTAGC TERM 5315 3796046 - 3796083 + r 91 -13.1 -2.81815 | opp_overlap 3796046 3796051, overlap 3796051 TGAGTTAAAAATAAG CAAAATTAAATGCTAGT TGTA ACTAGCATTTAATTTTA TGATTGATGATTAGC TERM 5316 3796078 - 3796051 - R 100 -13 -4.70739 | opp_overlap 3796046 3796051, overlap 3796046 TAAAAATAAGCAAAA TTAAATGCTAGT TGTA ACTAGCATTTAA TTTTATGATTGATGA TERM 5317 3796051 - 3796078 + r 100 -13 -4.56607 | opp_overlap 3796051 3796046, overlap 3796046 TAAAAATAAGCAAAA TTAAATGCTAGT TGTA ACTAGCATTTAA TTTTATGATTGATGA Dhaf_3569 3796920 - 3796099 - | hypothetical protein TERM 5318 3796540 - 3796556 + g 78 -5.1 -4.89852 | AGCAAGAAGCCTGTA GAATGGG TCT CCAATTC TTTTTGTAGCTGTAA TERM 5319 3796618 - 3796643 + g 73 -9.7 -3.40899 | TTGGGTTATAATTTT TTCGTCCGCCT TTTT AGGCGGCTGAA TTATAATCCCAACTT TERM 5320 3796892 - 3796879 - G 78 -5.3 -4.91573 | overlap 3796888 AAAAGACATGAAAAA CAACA AGAA TGTTG CTAACATCAAAGTAG Dhaf_3570 3797600 - 3797160 - | hypothetical protein Dhaf_3571 3798431 - 3797694 - | hypothetical protein TERM 5321 3798190 - 3798176 - G 73 -5.6 -4.65078 | ACACTGCTAAGAAAA CCACGG CAA CCTTGG CTAGGATTTGGGAGC TERM 5322 3799108 - 3799066 - H 72 -9.3 -3.21934 | gap 1, opp_overlap 3799060 3799067 3799072, overlap 3799067 3799072 TTCCTCCCACAAAAT CCAAAACCTCCCTATGCC TTCAGTGT GGTACAGGGAGG-TTTGG TTTCAGTTCTTTGAT TERM 5323 3799067 - 3799108 + H 81 -9.5 -3.90038 | opp_overlap 3799066 3799067 3799072, overlap 3799060 3799072 TCCTCCCACAAAATC CAAAACCTCCCTATGCC TTCAGTGT GGTACAGGGAGGTTTGG TTTCAGTTCTTTGAT TERM 5324 3799103 - 3799072 - H 82 -8 -4.4595 | opp_overlap 3799067 3799060 3799072, overlap 3799066 3799067 CCACAAAATCCAAAA CCTCCCTATGCC TTCAGTGT GGTACAGGGAGG TTTGGTTTCAGTTCT TERM 5325 3799072 - 3799103 + H 76 -8 -4.11275 | opp_overlap 3799072 3799066 3799067, overlap 3799067 3799060 CCACAAAATCCAAAA CCTCCCTATGCC TTCAGTGT GGTACAGGGAGG TTTGGTTTCAGTTCT Dhaf_3573 3799249 - 3799527 + | addiction module antitoxin, RelB/DinJ family Dhaf_3574 3799520 - 3799792 + | addiction module toxin, RelE/StbE family TERM 5326 3799946 - 3799902 - T 100 -11.6 -4.36914 | gap 1, opp_overlap 3799902, overlap 3799909 TTTCCTCCCACAAAA TCCAAAACCTCCCTATACCTT CAAT ATGGTGCAGGGAGG-TTTGGA TTTCATTTCATCTCA TERM 5327 3799902 - 3799946 + T 100 -11.6 -4.12738 | gap 1, opp_overlap 3799902 3799909 TTTCCTCCCACAAAA TCCAAAACCTCCCTATACCTT CAAT ATGGTGCAGGGAGG-TTTGGA TTTCATTTCATCTCA TERM 5328 3799940 - 3799909 - T 95 -9.4 -4.4595 | opp_overlap 3799902, overlap 3799902 CCACAAAATCCAAAA CCTCCCTATACCTT CAAT ATGGTGCAGGGAGG TTTGGATTTCATTTC Dhaf_3575 3800983 - 3799949 - | protein of unknown function UPF0118 TERM 5329 3801144 - 3801115 - R 95 -12.3 -3.27525 | opp_overlap 3801121, overlap 3801110 3801121 TGTCCGGAAATTTAA CCCAAATTCGTAA TCGA TTCCGAATTTGGG ATGATCCGACTGTAC TERM 5330 3801165 - 3801200 + r 100 -15.6 -3.84185 | gap 1, opp_overlap 3801165 CCGACTGTACAAGAA GAGCGTAAGCCCGGCAT GCC AT-CCGTGCTTACGCTC TTATCTTTCCCTGAA TERM 5331 3801200 - 3801165 - R 100 -15.6 -3.80733 | gap 1, opp_overlap 3801165 CCGACTGTACAAGAA GAGCGTAAGCCCGGCAT GCC AT-CCGTGCTTACGCTC TTATCTTTCCCTGAA Dhaf_3576 3801390 - 3801259 - | hypothetical protein Dhaf_3577 3801608 - 3801414 - | hypothetical protein Dhaf_3578 3802099 - 3801605 - | hypothetical protein TERM 5332 3802236 - 3802219 - R 91 -8.5 -4.72272 | overlap 3802200 GTTCTTTATCAAAAA TACCGTT GAAT AACGGTA CCTGTCCCTGTTATT Dhaf_3579 3803363 - 3802251 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 5333 3803323 - 3803293 - G 88 -11.9 -3.90112 | gap 1 TCTTCTTTAAGCAAA GCGGCGGCCATGGA ACTG TCCACA-CCGCCGC TCATGCCGACCACTA Dhaf_3580 3803749 - 3803375 - | FeS cluster assembly scaffold protein NifU Dhaf_3581 3804966 - 3803764 - | cysteine desulfurase NifS Dhaf_3582 3805466 - 3805026 - | transcriptional regulator, BadM/Rrf2 family TERM 5334 3805574 - 3805544 - H 75 -5.5 -4.8667 | opp_overlap 3805567 3805568, overlap 3805546 3805566 GATATCTTACAAAAA CACTCGGGATT TGTCAAGTC AATCCCGAGCA ATTTGCTCAGATTTT TERM 5335 3805572 - 3805546 - H 74 -8.1 -4.05067 | opp_overlap 3805567 3805568, overlap 3805544 3805566 TATCTTACAAAAACA CTCGGGATT TGTCAAGTC AATCCCGAG CAATTTGCTCAGATT TERM 5336 3805567 - 3805585 + H 86 -3 -5.626 | opp_overlap 3805546 3805544 3805566, overlap 3805568 ATTTGTCAAGTCAAT CCCGAGCA ATT TGCTCAGA TTTTTTTATAAAATA Dhaf_3583 3805862 - 3807175 + | AAA ATPase central domain protein TERM 5337 3807230 - 3807257 + T 90 -12.8 -2.55784 | opp_overlap 3807235, overlap 3807235 GAGCCTGATTAATAC AAAAACGGTGCC GAAT GGCACCGTTTTG ATCTTCCTTACCTTA TERM 5338 3807235 - 3807252 + T 100 -12.7 -4.46404 | opp_overlap 3807235, overlap 3807230 TGATTAATACAAAAA CGGTGCC GAAT GGCACCG TTTTGATCTTCCTTA TERM 5339 3807252 - 3807235 - T 100 -12.7 -5.1244 | opp_overlap 3807235 3807230 TGATTAATACAAAAA CGGTGCC GAAT GGCACCG TTTTGATCTTCCTTA Dhaf_3584 3807629 - 3807300 - | thioredoxin TERM 5340 3807421 - 3807434 + g 70 -9.5 -3.21595 | ATCACTTGGTATTGT CCGGC AATT GCCGG TTCCTCATCCACATT Dhaf_3585 3807978 - 3807700 - | protein of unknown function DUF156 TERM 5341 3808041 - 3808053 + r 74 -6.3 -4.49756 | overlap 3808048 AAAACAGAGTCCCTT CCTTT GTC AAAGG TTTTGCTATTTAAAA Dhaf_3586 3809885 - 3808107 - | aspartyl-tRNA synthetase Dhaf_3587 3811159 - 3809885 - | histidyl-tRNA synthetase TERM 5342 3811385 - 3811351 - H 100 -13.7 -5.29445 | gap 1, overlap 3811384 GTGCAACAATAAAAA GCCCCC-TCCCTTGCT GTAA AGCAAGGGACGAGAGC TCCCGTGGTGCCACC Dhaf_3588 3811803 - 3811916 + | hypothetical protein TERM 5343 3811938 - 3811914 - T 100 -15.9 -4.93547 | opp_overlap 3811914 GCAACGAAGCAAAAA TAAGATCGGAG CAG CTCCGATCTTA TTTTTTCATATTAAG TERM 5344 3811914 - 3811938 + T 100 -15.9 -5.27779 | opp_overlap 3811914 GCAACGAAGCAAAAA TAAGATCGGAG CAG CTCCGATCTTA TTTTTTCATATTAAG Dhaf_3589 3812413 - 3811964 - | PilT protein domain protein Dhaf_3590 3812664 - 3812401 - | hypothetical protein TERM 5345 3812831 - 3812803 - R 100 -7.6 -5.74122 | gap 2, opp_overlap 3812803 CACTATACAAAAAAA GATCGGA--GTACC CTC GGTACCCTCCGATC TTTTTTTGTATGCCT TERM 5346 3812803 - 3812831 + r 100 -7.6 -5.72616 | gap 2, opp_overlap 3812803 CACTATACAAAAAAA GATCGGA--GTACC CTC GGTACCCTCCGATC TTTTTTTGTATGCCT Dhaf_3591 3813527 - 3813069 - | hypothetical protein Dhaf_3592 3815373 - 3813670 - | histidine kinase Dhaf_3593 3816050 - 3815370 - | two component transcriptional regulator, winged helix family TERM 5347 3815510 - 3815536 + g 77 -6.4 -4.60255 | CATAGCCCCAGATCC TCGCCAGCAGGG TCT CCCGGGTGACGA TTTTTCCGGCATTCT TERM 5348 3816162 - 3816200 + r 76 -10.3 -2.95208 | gap 1, opp_overlap 3816162, overlap 3816165 CTCTGCTAATCAAAA GAACCCCCGCC-CTTGCC CTAA GGCAAGAGGTGAAGGTTC TCTACTCTTGATTCT TERM 5349 3816200 - 3816162 - R 100 -12.5 -4.4078 | gap 1, opp_overlap 3816162 3816165 CTCTGCTAATCAAAA GAACCCCCGCC-CTTGCC CTAA GGCAAGAGGTGAAGGTTC TCTACTCTTGATTCT Dhaf_3594 3817441 - 3816233 - | diguanylate phosphodiesterase TERM 5350 3816393 - 3816407 + g 77 -4.2 -5.00884 | CGATACCCATTGGGT TGCCCT AAA AGAGCA TTTTTTACCGGCACT Dhaf_3595 3819399 - 3817576 - | DNA mismatch repair protein MutS domain protein TERM 5351 3818514 - 3818536 + g 100 -10.6 -4.84359 | TGTTCTGAAGCTTCT GAAGTTCCTC TGT GCGGAACTTC TTTTTCTCAAGCTGC TERM 5352 3818969 - 3818981 + g 71 -9.1 -3.54459 | opp_overlap 3818967 3818964 3818963 TCGCTTAAAGCAATT CTCCC CAA GGGAG TTTGGGCAGAATTAA TERM 5353 3819310 - 3819298 - G 80 -4.1 -5.18297 | CAATAAGAAAGAAAA CAACC GAT AGTTG CTTAACTGATTCGCT Dhaf_3596 3819891 - 3819457 - | 3-demethylubiquinone-9 3-methyltransferase TERM 5354 3819970 - 3819934 - R 73 -3.8 -4.99035 | TTAGTGATACAAAAA GAGACAT-CCATGAGGAG TTC CACC-CATAGTATGCCTC TATAATTACCAATTT TERM 5355 3820022 - 3820003 - R 70 -10 -2.5262 | overlap 3820002 3820001 AATAATCAATAAACC TGCCCAGC CATT GCTGGACA ATCGACTCATACGTT Dhaf_3597 3821380 - 3820061 - | hypothetical protein Dhaf_3598 3821901 - 3821377 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 5356 3821984 - 3821970 - R 100 -9.2 -4.89521 | opp_overlap 3821970 3821974 AGACGCTAAAGAAAA CCCGGC TCC GCCGAG CTTAATTTTCACACC TERM 5357 3822117 - 3822084 - R 100 -19.1 -4.80882 | gap 1, opp_overlap 3822076 3822088 AGTGCATATGAAAAA CAACCGCTGCCCTGAA TGA TTCAGGGCAG-GGTTG TCTGGCCGTTTATAT TERM 5358 3822088 - 3822114 + r 100 -15.2 -3.51161 | opp_overlap 3822084, overlap 3822076 CATATGAAAAACAAC CGCTGCCCTGAA TGA TTCAGGGCAGGG TTGTCTGGCCGTTTA Dhaf_3599 3822528 - 3822220 - | DNA polymerase beta domain protein region TERM 5359 3822670 - 3822649 - R 100 -12.3 -4.56597 | TGCTGCGTCCAAAAA CAGGCAGCC CTAA AGCTGCCTG TCCAATCATAATTCT Dhaf_3600 3823229 - 3822714 - | phosphoesterase PA-phosphatase related TERM 5360 3823470 - 3823492 + r 100 -6.3 -5.73339 | overlap 3823473 CCGCTCTCGTCCTTG CAACCGCTT GCCTG AAGCGGTTA TTTTTTTATGGTTGT TERM 5361 3823473 - 3823489 + r 91 -8 -4.9041 | overlap 3823470 CTCTCGTCCTTGCAA CCGCTT GCCTG AAGCGG TTATTTTTTTATGGT TERM 5362 3823547 - 3823529 - R 100 -13.2 -5.40072 | overlap 3823541 GTGGTTGCAAAAAAA GCTCCTGA AAA TCAGGAGC TCTCCGGCAGGTCTT Dhaf_3601 3824121 - 3823540 - | hypothetical protein Dhaf_3602 3825557 - 3824232 - | PhoH family protein Dhaf_3603 3826097 - 3825624 - | protein of unknown function DUF458 TERM 5363 3826305 - 3826248 - H 83 -11.8 -2.72829 | gap 2, opp_overlap 3826257 3826280, overlap 3826235 3826231 3826250 3826257 TATACTTTCTGAAAG TATAAAAAATGAAAGCGAGTC--CTAAC TGCC GTCAGGAGACCCGCTTTCACTCTTTATA ATAATGATACCGATA TERM 5364 3826303 - 3826250 - H 73 -10 -2.90813 | gap 2, opp_overlap 3826257 3826280, overlap 3826231 3826248 3826257 TACTTTCTGAAAGTA TAAAAAATGAAAGCGAGTC--CTAAC TGCC GTCAGGAGACCCGCTTTCACTCTTTA TAATAATGATACCGA TERM 5365 3826296 - 3826257 - H 100 -8.1 -5.42265 | gap 2, opp_overlap 3826257 3826280, overlap 3826250 3826248 TGAAAGTATAAAAAA TGAAAGCGAGTC--CTAAC TGCC GTCAGGAGACCCGCTTTCA CTCTTTATAATAATG TERM 5366 3826537 - 3826525 - H 82 -4.9 -5.39681 | ATAAGTAAATAAAAA GAAAA AAT TTTTC TGCGGGCTCCACTGT TERM 5367 3826547 - 3826562 + H 76 -2.6 -5.32565 | gap 1, overlap 3826549 TTTTTCTGCGGGCTC CAC-TGT CCA ACAGGTG TTTTTTGCTTCCTTA TERM 5368 3826619 - 3826601 - H 100 -8.1 -5.27923 | gap 1, overlap 3826602 3826603 GAAGCCCATAAAAAA GCGGCCGG AGAG CCGGCC-C ATCAAAGTCCGGTGC TERM 5369 3826619 - 3826602 - H 75 -8.3 -3.75669 | overlap 3826601 3826603 AAGCCCATAAAAAAG CGGCCGG AGAG CCGGCCC ATCAAAGTCCGGTGC TERM 5370 3826618 - 3826603 - H 83 -11.8 -2.84317 | overlap 3826601 3826602 AGCCCATAAAAAAGC GGCCGG AGAG CCGGCC CATCAAAGTCCGGTG TERM 5371 3827362 - 3827344 - g 100 -14.6 -4.33808 | CAAAGGAATCGAAAA TCTGGCCC TGT GGGCCAGA GGAGTGGACTCTGTC Dhaf_3604 3826829 - 3827992 + | glycosyl transferase group 1 Dhaf_3605 3829444 - 3828119 - | nucleotide sugar dehydrogenase Dhaf_3606 3831115 - 3829559 - | Coproporphyrinogen dehydrogenase TERM 5372 3829692 - 3829675 - G 74 -11.3 -2.78495 | overlap 3829672 3829671 GATGATGAAAACTGA CCAGGGA AAAG TCCCTGG GATCAACGATTTTGC TERM 5373 3829770 - 3829799 + g 81 -12.9 -2.53747 | gap 1, opp_overlap 3829770, overlap 3829769 3829767 ATGCCAATATTATAA CGGCAT-GCCAAGC CGG GCTTGGCAAAGCCG ATGTTCTCCAGATTG TERM 5374 3829799 - 3829770 - G 89 -12.9 -3.52341 | gap 1, opp_overlap 3829770 3829769 3829767 ATGCCAATATTATAA CGGCAT-GCCAAGC CGG GCTTGGCAAAGCCG ATGTTCTCCAGATTG TERM 5375 3831135 - 3831124 - R 81 -7.2 -4.62069 | opp_overlap 3831124 3831123 TTTTCATTGCAAAAA CGGG TTTT CCCG CTTTTCCCTCCCGAT Dhaf_3607 3831729 - 3831112 - | beta-lactamase domain protein Dhaf_3608 3832218 - 3831769 - | D-tyrosyl-tRNA(Tyr) deacylase TERM 5376 3832071 - 3832059 - G 77 -6.9 -4.59773 | opp_overlap 3832059 3832058 CTCCATCTTCAAAAA GCCGA AGT CCGGC AATTTTATCCACCAT Dhaf_3609 3834401 - 3832221 - | (p)ppGpp synthetase I, SpoT/RelA TERM 5377 3833301 - 3833283 - G 91 -14.6 -3.16881 | GAGTGATTCCATGAA TTCCCCGG CAT CCGGGGAA TCATGCTGCCACTCC Dhaf_3610 3834941 - 3834429 - | adenine phosphoribosyltransferase TERM 5378 3834743 - 3834723 - G 73 -7.5 -4.18488 | overlap 3834742 ACGCACCGGAACAAA GCCAATGCC CAA GGCATAAGC TACCGGAGCTCCCAG Dhaf_3611 3837382 - 3834977 - | single-stranded-DNA-specific exonuclease RecJ TERM 5379 3835518 - 3835533 + g 72 -6 -4.32651 | opp_overlap 3835510 AGAGCAACGGAGTCC CCCCGG CTTT CCAGGG TTTTGCTCCATTCTT TERM 5380 3836973 - 3836983 + g 75 -5.4 -4.78237 | overlap 3836978 ATCACCTTCACATTG GCTT GCA AAGC TTTTGTTATAGCATC TERM 5381 3837468 - 3837454 - R 100 -9.2 -5.02323 | opp_overlap 3837454 3837453 TTATTATAAAGAAAA CCCGGC TTC GCCGAG CTTTATATTTCTCGC TERM 5382 3837586 - 3837568 - R 100 -8.9 -4.99638 | ATAGTGATATAAAAA GGACTTC CCAGT GAAGTCC TCCATCCGAGCCGCT Dhaf_3612 3838123 - 3837683 - | hypothetical protein TERM 5383 3837872 - 3837854 - G 71 -8.2 -3.7046 | GAAAAAAGCGCCAAA GATAACCA GAC TGGCTATC CCTCCGGCTAAACCT TERM 5384 3838482 - 3838452 - R 71 -9.1 -3.25729 | gap 1, opp_overlap 3838452 3838457, overlap 3838456 TATAAGTACTATCAA GAAAGGCCGCTGGA TATC TCCA-CGGCTTTTC TTGCATGCTCAGCAT TERM 5385 3838452 - 3838482 + r 84 -11.3 -3.09635 | gap 1, opp_overlap 3838452 3838456, overlap 3838457 TATAAGTACTATCAA GAAAGGCCGCTGGA TATC TCCA-CGGCTTTTC TTGCATGCTCAGCAT TERM 5386 3838457 - 3838477 + r 86 -7.6 -4.69053 | gap 1, opp_overlap 3838456 3838452, overlap 3838452 GTACTATCAAGAAAG GCCGCTGGA TATC TCCA-CGGC TTTTCTTGCATGCTC TERM 5387 3838559 - 3838540 - R 100 -11.4 -4.64657 | GCAAAGTGCGAAAAA GCCCCCTC GAAT GAGGAGGC TCACTGTGCAGATCT Dhaf_3613 3838719 - 3838582 - | hypothetical protein Dhaf_3614 3838854 - 3838750 - | hypothetical protein Dhaf_3615 3839943 - 3838984 - | polysaccharide deacetylase TERM 5388 3840080 - 3840051 - R 100 -16.7 -4.70659 | opp_overlap 3840051 3840057 TCCGACATTTAAAAA GCCAAATTACCAA CCGA TTGGTAATTTGGC TTAACTATCATTCCG TERM 5389 3840051 - 3840080 + r 100 -16.7 -3.16267 | opp_overlap 3840051, overlap 3840057 TCCGACATTTAAAAA GCCAAATTACCAA CCGA TTGGTAATTTGGC TTAACTATCATTCCG TERM 5390 3840057 - 3840074 + r 70 -7.1 -3.77666 | opp_overlap 3840051, overlap 3840051 ATTTAAAAAGCCAAA TTACCAA CCGA TTGGTAA TTTGGCTTAACTATC Dhaf_3616 3840592 - 3840098 - | acetolactate synthase, small subunit Dhaf_3617 3842290 - 3840599 - | acetolactate synthase, large subunit, biosynthetic type TERM 5391 3840982 - 3840972 - G 73 -5.4 -4.63527 | overlap 3840980 CCATCACCCGAAAAA CAGA CAA TCTG GCGGCCGGGGCATCC TERM 5392 3842407 - 3842440 + r 79 -11.2 -3.13553 | opp_overlap 3842414, overlap 3842414 CCTTCTGCCGGTGTA ATAAAAATTCCGGG AGCCAG CCCGGAATTTTTAG GTTTATATTAGATTA TERM 5393 3842414 - 3842433 + r 100 -9.3 -4.85433 | opp_overlap 3842414, overlap 3842407 CCGGTGTAATAAAAA TTCCGGG AGCCAG CCCGGAA TTTTTAGGTTTATAT TERM 5394 3842433 - 3842414 - R 100 -9.3 -5.06414 | opp_overlap 3842414 3842407 CCGGTGTAATAAAAA TTCCGGG AGCCAG CCCGGAA TTTTTAGGTTTATAT Dhaf_3618 3844678 - 3842471 - | protein-export membrane protein SecD TERM 5395 3843383 - 3843372 - G 72 -5.8 -4.35646 | opp_overlap 3843378 ACATTGAAATAGAAA GGCA TGGA TGCC TTAACATCTTCATAG Dhaf_3619 3845444 - 3844782 - | metal dependent phosphohydrolase TERM 5396 3845258 - 3845245 - G 76 -9.5 -3.73144 | ATATCATGAAGATAA GCGGC TACT GCCGC AAGCTCGCACTCACG Dhaf_3620 3846240 - 3845491 - | hypothetical protein TERM 5397 3845605 - 3845633 + g 74 -3.8 -4.85599 | overlap 3845605 TACAGCACCAACCAC TGCTCCGATTCC CGGCA GCATTTGGAGCA TTTTTCTCAGGTCGA TERM 5398 3846332 - 3846305 - R 86 -10 -4.01419 | opp_overlap 3846305 3846308, overlap 3846308 TAGCAACCAATGAAA TAAGCAAGCAGA TACT TCCACTTGCTTA TTCGTTCCTCTATAT TERM 5399 3846329 - 3846308 - R 73 -7.3 -4.12043 | opp_overlap 3846308 3846305, overlap 3846305 CAACCAATGAAATAA GCAAGCAGA TACT TCCACTTGC TTATTCGTTCCTCTA Dhaf_3621 3846739 - 3846383 - | preprotein translocase, YajC subunit Dhaf_3622 3847946 - 3846828 - | queuine tRNA-ribosyltransferase Dhaf_3623 3848989 - 3847964 - | S-adenosylmethionine/tRNA-ribosyltransferase-isomerase TERM 5400 3848840 - 3848789 - G 75 -10.3 -3.39895 | opp_overlap 3848791 3848793 3848794 3848815 TTTTTCACCAATTAA CCGAGCAGG-GATGACCCTGGTATT GTTG ACCACCAGGA-CATCTCCTGCTTGG AGCAGCTCGGGGAGT Dhaf_3624 3850410 - 3849031 - | SpoIID/LytB domain protein TERM 5401 3850395 - 3850385 - G 73 -5.4 -4.65895 | overlap 3850387 3850390 TTCTTTACGGAAAAA GACA ATC TGTC TGACAAAGGCAGCAA Dhaf_3625 3851550 - 3850504 - | Holliday junction DNA helicase RuvB Dhaf_3626 3852213 - 3851617 - | Holliday junction DNA helicase RuvA Dhaf_3627 3852716 - 3852219 - | crossover junction endodeoxyribonuclease RuvC TERM 5402 3852636 - 3852654 + g 85 -3.1 -5.54192 | ACAAGCATAATCCAC GGGAAAT AAACG ATTCCCC TTTTTTTCAATTAAT Dhaf_3628 3853825 - 3852821 - | hypothetical protein TERM 5403 3853978 - 3853947 - R 100 -15.3 -4.92812 | opp_overlap 3853947 CTATAAGAAAACAAA GAGTTCTGCACCG ATGACA CAGTGCAGAACTC TTGATCACTGAAAGA TERM 5404 3853947 - 3853978 + r 95 -13.1 -3.18264 | opp_overlap 3853947 CTATAAGAAAACAAA GAGTTCTGCACCG ATGACA CAGTGCAGAACTC TTGATCACTGAAAGA Dhaf_3629 3854790 - 3854032 - | protein of unknown function DUF28 TERM 5405 3854713 - 3854727 + g 71 -2.8 -4.87665 | CTCCCTGCCAAGCTT GGTAAA GAT TTTTCC TTTTTGTGCATCAGC Dhaf_3630 3854922 - 3855422 + | cytochrome c nitrite reductase, small subunit NrfH TERM 5406 3855809 - 3855793 - g 91 -6.5 -5.26875 | overlap 3855796 3855797 GGGTTAATGAAAAAA CCATCAG CTC CTGTTGG AACTGCAAAAGCCCT Dhaf_3631 3855423 - 3856865 + | Nitrite reductase (cytochrome; ammonia-forming) TERM 5407 3856911 - 3856879 - T 100 -16.4 -4.19336 | gap 1, opp_overlap 3856879 AATCATTGCAACAAA GGGAGGCCGC-AACT GCTT AGTCAGCGGCCTCCC TTATTACTTCCTTAC TERM 5408 3856879 - 3856911 + T 100 -14.2 -3.86031 | gap 1, opp_overlap 3856879 AATCATTGCAACAAA GGGAGGCCGC-AACT GCTT AGTCAGCGGCCTCCC TTATTACTTCCTTAC Dhaf_3632 3857347 - 3856937 - | hypothetical protein Dhaf_3633 3858427 - 3857435 - | hydrogenase expression/formation protein HypE TERM 5409 3858191 - 3858166 - G 79 -10.4 -3.65351 | overlap 3858167 TCACTGCCAGGGAAA GGTAGCGGGG CTGAGC CCCCGCTACG GCCAAGTCATTGATA TERM 5410 3858190 - 3858167 - G 88 -13.9 -2.78996 | overlap 3858166 CACTGCCAGGGAAAG GTAGCGGGG CTGAGC CCCCGCTAC GGCCAAGTCATTGAT Dhaf_3634 3859531 - 3858428 - | hydrogenase expression/formation protein HypD Dhaf_3635 3859739 - 3859518 - | hydrogenase assembly chaperone hypC/hupF Dhaf_3636 3862015 - 3859739 - | (NiFe) hydrogenase maturation protein HypF TERM 5411 3860331 - 3860349 + g 71 -4.4 -4.66163 | overlap 3860332 TCCGTCATCAGCCAC TCCCGCTC AGA GAGCAGGC TTTTTCCATAGGCAT TERM 5412 3860776 - 3860801 + g 76 -2.5 -5.32944 | GGCTGGTAAAGGCTC TGTCTTTGGCC CCCA GACAAAAGGCA TTTTTTAATTCTCCC TERM 5413 3862238 - 3862256 + H 86 -8.1 -4.57921 | ACCCCTCTGCTCTAT GCCCAGC AACGC GTTGGGC TCTTTTTTTGTTATG Dhaf_3637 3862352 - 3862570 + | small acid-soluble spore protein alpha/beta type TERM 5414 3862624 - 3862585 - T 76 -9.4 -3.57246 | overlap 3862583 ATGACGAATTAAATA TTGGAAGGAGAGCATGAC GGCC ATCATGTTCCCCTTGCAA ATGAAGTGACTCTTT TERM 5415 3862689 - 3862656 - T 100 -21.3 -3.38768 | opp_overlap 3862662, overlap 3862662 GGAGAGCACTTACAA GGAAAAGAAGCGAGT TGTC ACTCGCTTCTTTTCC TTAACCTGTCAAAAT TERM 5416 3862662 - 3862683 + T 100 -13.1 -4.42639 | opp_overlap 3862662 3862656 CACTTACAAGGAAAA GAAGCGAGT TGTC ACTCGCTTC TTTTCCTTAACCTGT TERM 5417 3862683 - 3862662 - T 100 -13.1 -4.50058 | opp_overlap 3862662, overlap 3862656 CACTTACAAGGAAAA GAAGCGAGT TGTC ACTCGCTTC TTTTCCTTAACCTGT Dhaf_3638 3864349 - 3862718 - | AMP-dependent synthetase and ligase TERM 5418 3863884 - 3863894 + g 71 -8.2 -3.62591 | overlap 3863891 CTTCTCCTTCATCCA GGCC CAT GGCC TTTAGGCCTTCTACA TERM 5419 3864558 - 3864516 - R 100 -9.3 -5.27938 | gap 1, opp_overlap 3864514 3864530 ACGGTTAAAGAAAAA CTCCCCTGATCGTAGTAAGA ATCC TCTTGCTACT-TCAAGGGAG TCTGGATTGCCAAAT Dhaf_3639 3865649 - 3864588 - | cytochrome C family protein TERM 5420 3865555 - 3865565 + g 83 -6.8 -4.99435 | opp_overlap 3865549, overlap 3865550 3865561 GGTGTAACAGCTGTC CCTG GGC CAGG TTTTTGGTTATTACA TERM 5421 3865856 - 3865825 - R 78 -7.2 -4.53439 | opp_overlap 3865826 3865844 3865845 TTAAACGCAAATAAA GCAGGCGACCTGTT AAAT ACCAGGCAACCTGC TTATCCTGTACCATT Dhaf_3640 3866091 - 3865906 - | hypothetical protein Dhaf_3641 3867235 - 3866234 - | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein Dhaf_3642 3867982 - 3867263 - | ABC transporter related TERM 5422 3867524 - 3867514 - G 71 -6.8 -4.18197 | AGGGTTCATCCAAAA GGAG GAG CTCC GGATCAATGGCCAAG Dhaf_3643 3868754 - 3867996 - | binding-protein-dependent transport systems inner membrane component TERM 5423 3868378 - 3868359 - G 76 -2.1 -5.28755 | gap 1, opp_overlap 3868362 AAAGACAGGAAAAAA CGCTG-CG TAGAC CATCAGCG CAATCTTCATTGCCT Dhaf_3644 3869832 - 3868798 - | acyltransferase 3 TERM 5424 3868982 - 3868964 - G 73 -10.4 -3.21395 | opp_overlap 3868954, overlap 3868962 ATTCCGGTCATAATA TGGAGATA CAT TATCTCCA TGGTGGCCTTCCCTA TERM 5425 3869188 - 3869170 - G 76 -2.3 -5.26155 | ATACAAATAGAAAAA GACTGCC AGATA GGCTATC GCTCCGAGCAACAAT TERM 5426 3869968 - 3869939 - R 100 -14.5 -3.4252 | opp_overlap 3869945, overlap 3869945 CCCCACCCATGAGAA TCCAAATGGTGCA CCGG TGCACCATTTGAA CCAAAGCAAAAAGAC TERM 5427 3869945 - 3869962 + r 78 -9.9 -3.53012 | opp_overlap 3869939 3869945 CCATGAGAATCCAAA TGGTGCA CCGG TGCACCA TTTGAACCAAAGCAA TERM 5428 3869962 - 3869945 - R 84 -9.9 -3.82083 | opp_overlap 3869945, overlap 3869939 CCATGAGAATCCAAA TGGTGCA CCGG TGCACCA TTTGAACCAAAGCAA TERM 5429 3870008 - 3869974 - R 83 -9.4 -3.92178 | opp_overlap 3869979 3869981, overlap 3869981 ACCATTTGAACCAAA GCAAAAAGACCATCTA CTA CAGACGGTCTCTTCAC TCTACTTACCTGGCA TERM 5430 3870001 - 3869981 - R 100 -8.3 -5.04222 | opp_overlap 3869979 3869981, overlap 3869974 GAACCAAAGCAAAAA GACCATCTA CTA CAGACGGTC TCTTCACTCTACTTA TERM 5431 3870719 - 3870735 + r 70 -5.1 -4.4715 | opp_overlap 3870716, overlap 3870700 GGGGGAGATAAGCCT GTTATCC CCA GGGTAGC TTTTATCCGTTGAGC TERM 5432 3871853 - 3871875 + r 88 -9.8 -4.15833 | AATCCTTAGGTTTTC GGCGGGTGAG ATT CTCACTCACC TTTTCGCATACTCAT TERM 5433 3872729 - 3872744 + r 74 -10.4 -2.71011 | overlap 3872724 3872742 GGAGTATTTAGCCTT GGGAGG TGGT CCTCCC TGCTTCCCACGGGGT TERM 5434 3872894 - 3872913 + r 70 -7.8 -3.66803 | opp_overlap 3872893 3872892 GAAGGTCCTACAACC CCAACCCC CGAA GGGATTGG TTTGGGCTGTTCCCG TERM 5435 3874452 - 3874470 + r 71 -6.6 -4.07687 | AGTTTCCGATGCAGT CCCAGGGT TGA GCCCTAGG TTTTCACACCAGACT TERM 5436 3875311 - 3875333 + r 78 -10.6 -3.38361 | AAAGACCATTTTTGT TTTTGCCGCT TTC AGCGGCGAGA TTCATCTTAACATTT TERM 5437 3875613 - 3875572 - R 79 -8.2 -4.23758 | gap 2, opp_overlap 3875572, overlap 3875587 ATCTGAGACTTAAAA GAGAGTGCCGAAAAAGCTAT TTTA ATAGCTTG--CGGCACTCCC TTACTTTCAGCAACT TERM 5438 3875600 - 3875587 - R 73 -5.3 -4.59109 | opp_overlap 3875572, overlap 3875572 GAGAGTGCCGAAAAA GCTAT TTTA ATAGC TTGCGGCACTCCCTT Dhaf_3645 3876931 - 3875738 - | Thiolase TERM 5439 3876730 - 3876714 - G 75 -11.5 -2.66316 | GCTCCCATCAGAGCA GCCGCCC ATG GAGCGGC ATAAAACGTATGCAA Dhaf_3646 3879124 - 3877040 - | protein of unknown function DUF224 cysteine-rich region domain protein Dhaf_3647 3880159 - 3879170 - | Electron transfer flavoprotein alpha/beta-subunit Dhaf_3648 3880967 - 3880194 - | Electron transfer flavoprotein alpha/beta-subunit Dhaf_3649 3881770 - 3880988 - | Enoyl-CoA hydratase/isomerase Dhaf_3650 3882056 - 3881796 - | hypothetical protein TERM 5440 3882110 - 3882165 + r 71 -8.5 -3.53563 | gap 2, opp_overlap 3882118, overlap 3882111 3882116 TGGAATGCACTTGTC CTTGAACACCTCTGCTTCAGATGGAGT TTAA GCTCCATCTGAAGCA-AGG-GTACGGA TTTCCAGAGAACTAT TERM 5441 3882111 - 3882164 + r 83 -12 -2.71924 | gap 2, opp_overlap 3882118, overlap 3882110 3882116 GGAATGCACTTGTCC TTGAACACCTCTGCTTCAGATGGAGT TTAA GCTCCATCTGAAGCA-AGG-GTACGG ATTTCCAGAGAACTA TERM 5442 3882159 - 3882118 - R 100 -18.2 -3.01791 | opp_overlap 3882116 3882111 3882110 ACTTGTCCTTGAACA CCTCTGCTTCAGATGGAG TTTAAG CTCCATCTGAAGCAAGGG TACGGATTTCCAGAG Dhaf_3651 3883041 - 3882184 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 5443 3882832 - 3882849 + g 90 -7.7 -5.06816 | gap 1, overlap 3882833 GGTGGTGGTGGTGAT G-CGCTGC AAA GCAGCGTC TTTTTCTTCAACCGT TERM 5444 3882833 - 3882847 + g 91 -11.4 -4.16307 | overlap 3882832 GTGGTGGTGGTGATG CGCTGC AAA GCAGCG TCTTTTTCTTCAACC Dhaf_3652 3884877 - 3883123 - | acyl-CoA dehydrogenase domain protein Dhaf_3653 3886262 - 3884922 - | major facilitator superfamily MFS_1 TERM 5445 3886014 - 3885992 - G 71 -7 -4.13282 | opp_overlap 3886005 ACCATATGGTGAAAA TGGCCAGA CCCTTTT TCCGGCCA ATACTGTCGGAAATA TERM 5446 3886183 - 3886198 + g 78 -7.6 -4.45485 | AAAATGAGGGTAAGG CCTACT AAAA AGTAGG TTTTATACGTATACT Dhaf_3654 3887590 - 3886307 - | L-carnitine dehydratase/bile acid-inducible protein F Dhaf_3655 3889207 - 3887864 - | major facilitator superfamily MFS_1 TERM 5447 3887938 - 3887928 - G 81 -3.2 -5.52023 | overlap 3887929 3887930 ACGACGAAGAAAAAA GCTA CTG CAGC GGCAATAAAGGAGGG TERM 5448 3889513 - 3889546 + r 95 -12.5 -3.27766 | opp_overlap 3889490 3889513 GGGGGCACACAGCAA GAGGCGTATCGAAAC CTTA GTCTCAATACGCCTC TTAATATAAAGTATT TERM 5449 3889546 - 3889513 - R 100 -16.9 -3.32022 | opp_overlap 3889513, overlap 3889490 GGGGGCACACAGCAA GAGGCGTATCGAAAC CTTA GTCTCAATACGCCTC TTAATATAAAGTATT Dhaf_3656 3891496 - 3889568 - | putative sigma54 specific transcriptional regulator TERM 5450 3889632 - 3889644 + g 75 -3.3 -5.09762 | ATCATTAATGCGAGT TCACC GTT GGAGA TTTTTGTCTTCGCCT TERM 5451 3890245 - 3890231 - G 71 -4.2 -4.66609 | TATTTCATCCAAAAA CAGGGT TCC ACCATG AGCTATTTCGAATAG TERM 5452 3891658 - 3891614 - R 100 -8.8 -4.93547 | gap 1, opp_overlap 3891614 3891615, overlap 3891615 GTAATTAATTAAAAA CGAAGTGTTG-CAATCTACCC GTCA AAGTAGTTTGGCAACACTTCA TTTTAGCAATGGATC TERM 5453 3891657 - 3891615 - R 78 -10.1 -3.55043 | gap 1, opp_overlap 3891614 3891615, overlap 3891614 TAATTAATTAAAAAC GAAGTGTTG-CAATCTACCC GTCA AAGTAGTTTGGCAACACTTC ATTTTAGCAATGGAT Dhaf_3657 3893338 - 3891674 - | beta-lactamase domain protein TERM 5454 3892035 - 3892051 + g 80 -12.3 -2.81133 | overlap 3892029 3892028 ATCAGCACTTTCCCA GCGGGAA CTT TTCCCGC TATACTCGCTCCATG TERM 5455 3893667 - 3893634 - R 100 -12.7 -5.09685 | opp_overlap 3893634 3893633 CAAGAGATAGAAAAA GCAGAAATTCAATCT AAAA AAATTGAATCTCTGC CTTTCAATAATTACC Dhaf_3658 3894593 - 3893718 - | dihydrodipicolinate synthase TERM 5456 3894250 - 3894263 + g 74 -6.7 -4.35483 | opp_overlap 3894249 3894250 AAATGTTGATACAAT CCTTC TTGT GAAGG TTTATTGTAGTAGGG Dhaf_3659 3895852 - 3894623 - | aspartate kinase, monofunctional class Dhaf_3660 3896976 - 3895987 - | aspartate-semialdehyde dehydrogenase TERM 5457 3897046 - 3897015 - R 78 -10.2 -3.3341 | overlap 3897008 ATAAAATACTAGGAA TATGGTGCTAAGCC TGAA AGCACAGCACCATA TCCACCTAACTGATC Dhaf_3661 3897661 - 3897074 - | dipicolinic acid synthetase, B subunit Dhaf_3662 3898591 - 3897680 - | dipicolinic acid synthetase, A subunit TERM 5458 3898414 - 3898402 - G 81 -7.7 -4.64766 | opp_overlap 3898401 3898402, overlap 3898408 3898411 CGTACATTGGAAAAA GCAGA ACA TCTGC CTTCTCCACCGCTTC TERM 5459 3898449 - 3898408 - G 95 -13.9 -3.75505 | gap 1, opp_overlap 3898402 3898401 3898444, overlap 3898402 3898411 3898444 TTGGAAAAAGCAGAA CATCTGCCTTCTCCACCGCT TCC AGCGGTGAAGAAAGGAG-TG TCACCCCTTGGATTG TERM 5460 3898447 - 3898411 - G 100 -16.7 -2.65938 | opp_overlap 3898402 3898401 3898444, overlap 3898402 3898408 3898444 GAAAAAGCAGAACAT CTGCCTTCTCCACCGCT TCC AGCGGTGAAGAAAGGAG TGTCACCCCTTGGAT Dhaf_3663 3899479 - 3898676 - | Dihydrodipicolinate reductase TERM 5461 3898925 - 3898939 + g 75 -5.6 -4.81852 | overlap 3898926 GTACTCATTAGGATG ACCCTG CAC CAGGGG TTTTCTTACTTCTGA TERM 5462 3898926 - 3898938 + g 71 -9.1 -3.48027 | overlap 3898925 TACTCATTAGGATGA CCCTG CAC CAGGG GTTTTCTTACTTCTG TERM 5463 3899525 - 3899538 + r 86 -6.7 -4.98616 | opp_overlap 3899501 TGCCAAGGCATTTCG GGGTT GTTG AACCC TTTTTACTATTTTAG TERM 5464 3899604 - 3899650 + r 86 -8.9 -4.25056 | gap 1, opp_overlap 3899614, overlap 3899608 CCCCACAGAGGATAA GTCAGCTAAACTGTAGATAGAG GCCG CTCTATCTACAGTA-AGCTTCC TTTATTAATGCGCTC TERM 5465 3899608 - 3899646 + r 100 -12.7 -3.70925 | gap 1, opp_overlap 3899614, overlap 3899604 ACAGAGGATAAGTCA GCTAAACTGTAGATAGAG GCCG CTCTATCTACAGTA-AGC TTCCTTTATTAATGC TERM 5466 3899641 - 3899614 - R 100 -15.8 -3.69333 | opp_overlap 3899608 3899604 GATAAGTCAGCTAAA CTGTAGATAGAG GCCG CTCTATCTACAG TAAGCTTCCTTTATT Dhaf_3664 3899917 - 3899636 - | sporulation protein, YlmC/YmxH family Dhaf_3665 3900232 - 3899930 - | hypothetical protein Dhaf_3666 3900756 - 3900301 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut TERM 5467 3900447 - 3900437 - G 75 -5.4 -4.77165 | TCTTTTACAACAAAA GGTT CCG AACC CTGGTTGATGACTGC Dhaf_3667 3902045 - 3900771 - | peptidase M16 domain protein TERM 5468 3902017 - 3902032 + g 80 -4.7 -5.1675 | GTAATGATACGAACT CCGTT AGGTAA AACGG TTTTTTGATACATAC Dhaf_3668 3903190 - 3902051 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 5469 3902200 - 3902211 + g 74 -3 -5.10163 | GGAGACCTGGCTCTC TTGT CCAA ACAA TTTTCTTTTCAAGTT TERM 5470 3902912 - 3902929 + g 71 -6.9 -4.14392 | CGCTTTTTCGCTTAC CACGACG AGCT CGTCGGG TTTTCCCAATTCCAG TERM 5471 3902991 - 3903002 + g 70 -2.2 -4.91511 | CTGGCTGGCGGTCTT TGCT TATG AGCG TTTTTGTCATAAAGT TERM 5472 3903174 - 3903151 - G 81 -9.6 -4.00587 | opp_overlap 3903151 3903154, overlap 3903154 AAGATAGTGAAATAA GAACGCAAAC CCCG GCTTGCGTCC ATTTTTGCTTGAACA TERM 5473 3903171 - 3903154 - G 73 -7.7 -4.11346 | opp_overlap 3903151 3903154, overlap 3903151 ATAGTGAAATAAGAA CGCAAAC CCCG GCTTGCG TCCATTTTTGCTTGA Dhaf_3669 3903964 - 3903212 - | polysaccharide deacetylase TERM 5474 3903575 - 3903588 + g 73 -5.3 -4.51994 | CTCCTGAATGATCGC TTCTG TCTT CAGAA TTTCTTCTTGATTGG TERM 5475 3904012 - 3903958 - G 73 -4.6 -4.67234 | gap 3, overlap 3903960 3903962 ATGGAATTTTAAAAA CATACATTCGTCTACCCCCTTCCAT TTAGATGT ATGCAAGGGGG--GACGAATGCA-G AATAATTGAGGCTAT TERM 5476 3904011 - 3903960 - G 73 -8.3 -3.94933 | gap 2, overlap 3903958 3903962 GGAATTTTAAAAACA TACATTCGTCTACCCCCTTCCAT TTAGATGT ATGCAAGGGGG--GACGAATGCA GAATAATTGAGGCTA Dhaf_3670 3906205 - 3904034 - | Polyribonucleotide nucleotidyltransferase TERM 5477 3905913 - 3905901 - G 72 -10.5 -3.06696 | CCTTCGGGGAATAGA GGCCG AAT CGGCC GGTCGATGAGGCGGG TERM 5478 3905998 - 3905975 - G 75 -8 -4.15044 | CTCCCGCTTAATAAA GCCTCCCGGA ATTT TCCCGGCGGC ATAGAGTCTCTCTTC TERM 5479 3906103 - 3906088 - G 70 -7.6 -3.95071 | CAAATGCTGAAACAA CGGTAT CCCC ATACCG GCAGAAAATGGCACC TERM 5480 3906411 - 3906435 + r 100 -10.8 -4.59984 | opp_overlap 3906411 GATACGTATAAAAAA GAGAGACAGG AATAG TCTGTCTCTC TTTTCTCTCCATTTT TERM 5481 3906435 - 3906411 - R 100 -10.1 -5.29782 | opp_overlap 3906411 GATACGTATAAAAAA GAGAGACAG GAATAGT CTGTCTCTC TTTTCTCTCCATTTT Dhaf_3671 3906734 - 3906468 - | ribosomal protein S15 Dhaf_3672 3907811 - 3906855 - | riboflavin biosynthesis protein RibF Dhaf_3673 3908740 - 3907856 - | tRNA pseudouridine synthase B Dhaf_3674 3909704 - 3908724 - | phosphoesterase RecJ domain protein TERM 5482 3909639 - 3909664 + g 75 -10.5 -3.43071 | opp_overlap 3909644, overlap 3909644 CGGGGATACATGGGA GAAAAGCGCCA CTTT TGACGCTTTTC TTAATTCCTCTGCCA TERM 5483 3909644 - 3909659 + g 73 -4.6 -4.80178 | opp_overlap 3909644, overlap 3909639 ATACATGGGAGAAAA GCGCCA CTTT TGACGC TTTTCTTAATTCCTC TERM 5484 3909659 - 3909644 - G 74 -6.8 -4.4195 | opp_overlap 3909644 3909639 ATACATGGGAGAAAA GCGCCA CTTT TGACGC TTTTCTTAATTCCTC Dhaf_3675 3910071 - 3909694 - | ribosome-binding factor A Dhaf_3676 3913011 - 3910096 - | translation initiation factor IF-2 TERM 5485 3911232 - 3911254 + g 71 -8.4 -3.63766 | overlap 3911246 ACTCGGTCAATTCCT GCTTAACCCG ATC CGGGTTAGAC TCTTCTTTATCAATC Dhaf_3677 3913351 - 3913055 - | ribosomal protein L7Ae/L30e/S12e/Gadd45 Dhaf_3678 3913614 - 3913345 - | protein of unknown function DUF448 Dhaf_3679 3915105 - 3913624 - | NusA antitermination factor Dhaf_3680 3915610 - 3915152 - | protein of unknown function DUF150 TERM 5486 3915714 - 3915683 - R 74 -4.5 -4.83243 | gap 1, opp_overlap 3915687 3915690, overlap 3915688 GTTATACAAAACAAA GGAAA-GAGTGGGT TCAAG ACCCACTCCTCTTC GGCTGCAATAGAATT TERM 5487 3915708 - 3915688 - R 100 -11.2 -4.33487 | opp_overlap 3915687 3915690, overlap 3915683 ACAAAACAAAGGAAA GAGTGGGT TCAAG ACCCACTC CTCTTCGGCTGCAAT Dhaf_3681 3916676 - 3915798 - | hypothetical protein TERM 5488 3916288 - 3916300 + g 77 -4.1 -5.06103 | TCCATCATGGCTGGG TCATC AAA GGTGA TTTTTTGCCAGTTGT TERM 5489 3916403 - 3916417 + g 71 -4.3 -4.70319 | CCATGCCAGGAATAG TGGTT TCCAT AACCA TTTTCATTTTCATCG Dhaf_3682 3917155 - 3917030 - | hypothetical protein TERM 5490 3918375 - 3918332 - R 100 -24.2 -4.87052 | opp_overlap 3918332, overlap 3918316 GAGAAAGTAACAAAA GTACTTTCCCACTGTCACCC TAAA AGGTAACAGTGGGAAAGTAC TTTGCGCGCCCTATA TERM 5491 3918332 - 3918375 + r 100 -21.3 -3.54129 | opp_overlap 3918316 3918332 GAGAAAGTAACAAAA GTACTTTCCCACTGTCACC CTAAAA GGTAACAGTGGGAAAGTAC TTTGCGCGCCCTATA Dhaf_3684 3919493 - 3918429 - | hypothetical protein Dhaf_3685 3919852 - 3919622 - | hypothetical protein Dhaf_3686 3921080 - 3920325 - | two component transcriptional regulator, LytTR family TERM 5492 3921039 - 3921017 - G 80 -6.9 -4.66833 | opp_overlap 3921008 TGGGAATGCCAAAAA GCGCCCGTT TGAGT ATCAGGCGC ATATTAGCATCGTCT Dhaf_3687 3921875 - 3921390 - | Accessory gene regulator B Dhaf_3688 3922729 - 3921887 - | signal transduction histidine kinase regulating citrate/malate metabolism Dhaf_3689 3923227 - 3922736 - | hypothetical protein TERM 5493 3923405 - 3923381 - R 100 -8.5 -5.47399 | overlap 3923384 TCAATGGTAAAAAAA CAATCCGCCCC GTT GGAGCGGATAA CAGTTTATTTCATTG TERM 5494 3923402 - 3923384 - R 100 -12.4 -4.80853 | overlap 3923381 ATGGTAAAAAAACAA TCCGCCCC GTT GGAGCGGA TAACAGTTTATTTCA Dhaf_3690 3924078 - 3923518 - | hypothetical protein Dhaf_3691 3924394 - 3924206 - | hypothetical protein TERM 5495 3924462 - 3924433 - R 100 -14.5 -4.08706 | opp_overlap 3924439, overlap 3924434 CGCCGACGACATAAA CTCAAATGGTGCA CCGT TGCACCATTTGAA CTACAGGCACATGGT TERM 5496 3924461 - 3924434 - R 100 -15.8 -3.04902 | opp_overlap 3924439, overlap 3924433 GCCGACGACATAAAC TCAAATGGTGCA CCGT TGCACCATTTGA ACTACAGGCACATGG TERM 5497 3924439 - 3924456 + r 80 -9.9 -3.59979 | opp_overlap 3924434 3924433 CGACATAAACTCAAA TGGTGCA CCGT TGCACCA TTTGAACTACAGGCA Dhaf_3692 3925889 - 3924576 - | hypothetical protein TERM 5498 3925815 - 3925833 + g 80 -4.5 -5.10208 | opp_overlap 3925829, overlap 3925818 GCCGACCTGCCTGGC GCCGC GGATAATAA GCGGC TTTTTATTCCGCTTG TERM 5499 3926029 - 3926004 - R 100 -12.1 -3.93963 | opp_overlap 3926008, overlap 3926008 AGCAGCATTTACAAA GAAATTACCAA CCAA TTGGTAATTTC GCCACTTCATTCTCC TERM 5500 3926025 - 3926008 - R 78 -7.1 -4.57482 | opp_overlap 3926008, overlap 3926004 GCATTTACAAAGAAA TTACCAA CCAA TTGGTAA TTTCGCCACTTCATT Dhaf_3693 3926566 - 3926036 - | hypothetical protein TERM 5501 3926591 - 3926609 + r 86 -9 -4.26589 | opp_overlap 3926595, overlap 3926588 CCTTTAATTTCTTTA TATACCAT ATA ATGGTATA TTTTCGGTATGTAAT TERM 5502 3926731 - 3926694 - R 100 -23 -3.81488 | opp_overlap 3926699, overlap 3926699 TTTGCTTAAATATAA TAGAACCCCCTGCCAT TCATTG ATGGCAGGGGGTTCTA AACCAACCGTTAAAA TERM 5503 3926699 - 3926726 + r 100 -17.8 -3.28791 | opp_overlap 3926694 3926699 TTAAATATAATAGAA CCCCCTGCCATT CATT GATGGCAGGGGG TTCTAAACCAACCGT TERM 5504 3926726 - 3926699 - R 100 -17.1 -3.87201 | opp_overlap 3926699, overlap 3926694 TTAAATATAATAGAA CCCCCTGCCAT TCATTG ATGGCAGGGGG TTCTAAACCAACCGT TERM 5505 3926763 - 3926751 - R 71 -4.9 -4.66535 | opp_overlap 3926751 AACCGTTAAAACAAA TTTGA AAT TCAAA CTTATTCCTGGCATA Dhaf_3694 3927674 - 3926862 - | hypothetical protein TERM 5506 3926985 - 3927001 + g 79 -10.1 -3.65351 | GAAATTCATACGGCA GCGGGGA TTA TCCCTGC TTTCAATGGCAATGG Dhaf_3695 3928960 - 3927653 - | Radical SAM domain protein TERM 5507 3927907 - 3927930 + g 72 -11 -2.71681 | opp_overlap 3927919 GATGGGCTATTTTCC GTGCCCGC AAAATCCG GCGGGCAC TGGTTACGCCGATTC TERM 5508 3927960 - 3927919 - G 71 -7.1 -4.07568 | opp_overlap 3927907 TCCGTGCCCGCAAAA TCCGGCGGGCACTGGTTAC GCCG ATTCCCGGTACCCGCAGGA GCATTTCATACGGAG Dhaf_3696 3929695 - 3929141 - | hypothetical protein TERM 5509 3929742 - 3929723 - R 73 -2.8 -5.14163 | opp_overlap 3929726, overlap 3929724 3929726 ACCTACCAATAAAAA TCATCAGC TATT GCTGATAT CTACATGCAAGCAAA Dhaf_3697 3930117 - 3929872 - | plasmid stabilization system Dhaf_3698 3930361 - 3930104 - | hypothetical protein TERM 5510 3930492 - 3930464 - R 100 -10.2 -4.85782 | opp_overlap 3930489, overlap 3930447 TGGTTGAAAAATAAA CCGGGAGATGCC TTTAC AGCTCCTCCCGG TCATACCGCTCATAT Dhaf_3699 3932254 - 3930527 - | prolyl-tRNA synthetase Dhaf_3700 3933339 - 3932245 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 5511 3932336 - 3932352 + g 70 -2.1 -5.00616 | opp_overlap 3932336 3932337, overlap 3932337 TCTTCTTCCGATAAA CGGGCGA CAA TCTCCCC TTTTTTAAAGAGCAA Dhaf_3701 3934416 - 3933352 - | membrane-associated zinc metalloprotease Dhaf_3702 3935698 - 3934553 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dhaf_3703 3936811 - 3935714 - | sporulation integral membrane protein YtvI TERM 5512 3936529 - 3936518 - G 70 -2.2 -4.94972 | GACTACAATCAAAAA GACA ATAC TGCC AATTCCCAAAATAGC TERM 5513 3936754 - 3936776 + g 73 -3.4 -4.91429 | opp_overlap 3936757 3936760, overlap 3936757 GAACCAAAATAAAGG TAATAACCGC CAG GCGATTAATA TTTTGTTTAAGCTTT Dhaf_3704 3937598 - 3936816 - | phosphatidate cytidylyltransferase TERM 5514 3937202 - 3937191 - G 71 -4.4 -4.75288 | CCATACCAAAATAAA GGTA AGGA TACC CCAAGCTATTCCTTC Dhaf_3705 3938379 - 3937609 - | undecaprenyl diphosphate synthase TERM 5515 3938442 - 3938418 - R 90 -11.5 -3.65425 | opp_overlap 3938409, overlap 3938411 CTTAGAGAGGGTAAA GACCCCCTT ATGTTTA AAGGGGGTC AGAGCCACTGGAAAT TERM 5516 3938452 - 3938475 + r 78 -5.4 -4.93877 | overlap 3938451 GGGGTCAGAGCCACT GGAAATCA AACTTCCA TGATTTCC TTTTCTTTCGTACCC Dhaf_3706 3939014 - 3938457 - | ribosome recycling factor TERM 5517 3938510 - 3938527 + g 77 -4.1 -5.03715 | TACGATCAATTTCTT TGACGAA CTTA TCCGTCA TTTTTTGCACATCAT Dhaf_3707 3939736 - 3939014 - | uridylate kinase TERM 5518 3939841 - 3939822 - R 91 -8.6 -4.58395 | opp_overlap 3939822 3939815 3939824 CTGACGGTGTAAAAA GAGAACAC CTAA GTGTCCTC TAATTGCTTACCTTA Dhaf_3708 3940507 - 3939854 - | translation elongation factor Ts Dhaf_3709 3941386 - 3940652 - | ribosomal protein S2 Dhaf_3710 3941982 - 3941539 - | hypothetical protein Dhaf_3711 3942819 - 3942031 - | GTP-sensing pleiotropic transcriptional repressor CodY Dhaf_3712 3944241 - 3942865 - | heat shock protein HslVU, ATPase subunit HslU Dhaf_3713 3944784 - 3944254 - | 20S proteasome A and B subunits TERM 5519 3945059 - 3945008 - H 89 -11.7 -3.54424 | gap 1, opp_overlap 3945021 TTCGACTTGTCCAAA GCCTGTTGGGAAAGCTCTTTTAGG ACAGA CCCCAAAGGGCTTTTCCA-CAGGC TGGCACTGTCCACAG TERM 5520 3946241 - 3946226 - g 73 -3.3 -4.9138 | AGCAGGTAAAGAAAA TCGAT AAGGCA ATCGA AGCAGAAATCAGGCA Dhaf_3714 3945424 - 3946671 + | transposase IS116/IS110/IS902 family protein Dhaf_3715 3947800 - 3946904 - | integrase family protein TERM 5521 3947573 - 3947546 - G 77 -2.7 -5.1848 | opp_overlap 3947546 AAGGAACTTAAAAAA GGCTCTCAA GGCAGAAAGT TTGCGAGCC ATGCTTTTTCTCTCC TERM 5522 3948468 - 3948444 - R 100 -13.7 -3.89346 | overlap 3948428 CCTGCAGCGGAGAAA GGTTGGAAACA GGA CGTTTCCAACC CGCCACTGAGCAGGA Dhaf_3716 3949906 - 3948593 - | gid protein TERM 5523 3949455 - 3949440 - G 73 -3.2 -4.91109 | GCGGCATCATAAAAA GCAAGG GCAT CCTCAC CTGTCACCTGCTGAA TERM 5524 3949787 - 3949809 + g 81 -12.7 -2.66435 | opp_overlap 3949774, overlap 3949776 3949785 ATGGCCGGTATGGTG GGCCGGTGT CATTT GCACCGGCC TCATCTCATAAAGCT Dhaf_3717 3951998 - 3949908 - | DNA topoisomerase I Dhaf_3718 3953311 - 3952142 - | DNA protecting protein DprA TERM 5525 3952955 - 3952934 - G 78 -12.3 -2.5805 | overlap 3952933 ACGAGCCCCCACAAT GGCCAGGCA TTCT TGCCTGACC GGCAAAGCTCCTTTG Dhaf_3719 3954316 - 3953459 - | Ku protein Dhaf_3720 3955084 - 3954533 - | hypothetical protein Dhaf_3721 3956201 - 3955599 - | hypothetical protein TERM 5526 3955762 - 3955742 - G 72 -11.2 -2.62396 | overlap 3955746 CAGCCTCCCAGATCA CCAAGGTG ATGGG CACCTTGG GGAATACACTGAGAA TERM 5527 3955845 - 3955861 + g 87 -10.9 -4.07687 | opp_overlap 3955838 CTGAATAAGCTTTGA CCTTTGG GAA CCAAAGG TTTTAACCAAAGGAT TERM 5528 3956139 - 3956162 + g 79 -9.6 -3.85698 | GGAGTATTCTGATAT TTCCTCAAGG GTTG CCTTGCGGAA TTTCTCAAGGGCCAC TERM 5529 3956650 - 3956673 + G 75 -6 -4.64861 | overlap 3956672 GAGTATGAATGGGAT GCCTATCG CAATAACT CGGTAGGC TTTGTTTTCCAAAGC TERM 5530 3956863 - 3956830 - g 83 -4.5 -5.252 | gap 1, overlap 3956835 3956839 CATCTGCATAAAAAA CCCAAT-CAACTGTCC GGG GGACAGATGCAAAGGG TTGCCATAGCACGGG TERM 5531 3956853 - 3956839 - g 74 -10 -3.47915 | overlap 3956835 3956830 AAAAAACCCAATCAA CTGTCC GGG GGACAG ATGCAAAGGGTTGCC Dhaf_3722 3956416 - 3958755 + | ABC transporter related Dhaf_3723 3959591 - 3958761 - | Xylose isomerase domain protein TIM barrel TERM 5532 3959973 - 3959958 - g 73 -5.4 -4.62302 | CAATATGGTGAAAAA GGCAAT TGAG ATCGCC GAACGCAATATGGCC Dhaf_3724 3959824 - 3960003 + | small acid-soluble spore protein (minor alpha/beta-type SASP) TERM 5533 3960069 - 3960012 - T 70 -9.4 -2.86271 | gap 2, opp_overlap 3960020 3960021, overlap 3960021 3960033 GTCCTAGGACAAGGA CGGTAATGAGGGCTCGTAAGATTCGAAT CCAG ATTCGAATCTTGCGAGCCC-CTTT-CTA AATGCCGGTACTCTA TERM 5534 3960020 - 3960063 + T 100 -22 -3.92075 | opp_overlap 3960012 3960021 3960033, overlap 3960021 ACAAGGACGGTAATG AGGGCTCGTAAGATTCGAAT CCAG ATTCGAATCTTGCGAGCCCC TTTCTAAATGCCGGT TERM 5535 3960021 - 3960062 + T 100 -25.5 -2.94924 | opp_overlap 3960012 3960021 3960033, overlap 3960020 CAAGGACGGTAATGA GGGCTCGTAAGATTCGAAT CCAG ATTCGAATCTTGCGAGCCC CTTTCTAAATGCCGG TERM 5536 3960062 - 3960021 - T 100 -23.3 -2.74488 | opp_overlap 3960021 3960020, overlap 3960012 3960033 CAAGGACGGTAATGA GGGCTCGTAAGATTCGAAT CCAG ATTCGAATCTTGCGAGCCC CTTTCTAAATGCCGG Dhaf_3725 3960513 - 3960082 - | heat shock protein Hsp20 Dhaf_3726 3960776 - 3960582 - | copper ion binding protein Dhaf_3727 3963765 - 3960835 - | heavy metal translocating P-type ATPase TERM 5537 3961440 - 3961454 + g 74 -4.2 -4.93547 | CTTTCCCGTCATAGG CCACAA AGC TGGTGG TTTTTCCTTCATTGG TERM 5538 3962108 - 3962132 + g 77 -8.5 -4.30576 | opp_overlap 3962115, overlap 3962110 ACCATTTTAATAATT CCGGAAAGGAC ACT GTCCTTGCCTG TTTTGGTGGTGGAGA TERM 5539 3962110 - 3962130 + g 76 -9.7 -3.7574 | opp_overlap 3962115, overlap 3962108 CATTTTAATAATTCC GGAAAGGAC ACT GTCCTTGCC TGTTTTGGTGGTGGA TERM 5540 3962332 - 3962347 + g 78 -6.1 -4.80959 | CCCGATTTTGACACT GGAGG CGGGGA CCTCC TTTTCTTCTCCATTA Dhaf_3728 3964148 - 3963813 - | protein of unknown function DUF156 TERM 5541 3964122 - 3964135 + g 83 -2.4 -5.64274 | overlap 3964123 TGAGTCATGGCAAGC TGGA CAGTGT TCCA TTTTTTTGTCCATAA TERM 5542 3964270 - 3964219 - R 100 -4.6 -6.11243 | ATTTAATAAAAAAAA TGCTCCGCCAACC-CAGTCAGGTT AGTAAA AACCC-ACTGCAGTCAGAGGAGCA CATCTCTATCCAATA Dhaf_3729 3964686 - 3964330 - | transporter protein Dhaf_3730 3965947 - 3964688 - | hypothetical protein TERM 5543 3965912 - 3965880 - G 100 -9.2 -4.72486 | overlap 3965881 GAGAAATCTGAAAAA GGCACTGTGGGT ACCAGCATG ACCCACAGTGCA TCAGCCAGCAAACCA TERM 5544 3965911 - 3965881 - G 87 -12.7 -3.42407 | overlap 3965880 AGAAATCTGAAAAAG GCACTGTGGGT ACCAGCATG ACCCACAGTGC ATCAGCCAGCAAACC Dhaf_3731 3966903 - 3965947 - | UbiA prenyltransferase Dhaf_3732 3966897 - 3967619 + | hypothetical protein TERM 5545 3967640 - 3967617 - fH 70 -3.8 -4.84642 | opp_overlap 3967627 3967628, overlap 3967626 CTTAAACGAATAAAA TGAGAGAATC CTAG GCTCCTCCCA CCGTAGTCGGCTGTG TERM 5546 3967627 - 3967681 + FH 79 -6.6 -4.62471 | gap 2, opp_overlap 3967617 3967626, overlap 3967628 TAAAATGAGAGAATC CTAGGCTCCTCCCACCGTAGTCGGCT GTGAA AATC-ACTACGCTG-GAGGAGCCTAA TTTTTACAAATTCCC TERM 5547 3967628 - 3967680 + FH 76 -10.1 -3.37 | gap 2, opp_overlap 3967617 3967626, overlap 3967627 AAAATGAGAGAATCC TAGGCTCCTCCCACCGTAGTCGGCT GTGAA AATC-ACTACGCTG-GAGGAGCCTA ATTTTTACAAATTCC TERM 5548 3967737 - 3967754 + FH 72 -7.7 -3.82208 | TATTTTGTCGAATTC TTCCTCC TATG GGAGGGA TTTGGATGTTTGCTG TERM 5549 3968880 - 3968899 + G 75 -10.6 -3.34192 | AAATCAGTCATTACC GCGGCCGG ATAT CCGGCCCC TTGCTTGACCGCCTT Dhaf_3733 3967760 - 3969283 + | Mg chelatase, subunit ChlI TERM 5550 3969356 - 3969400 + T 100 -15.8 -5.14477 | opp_overlap 3969354 3969353 GACAAGCAGAAATTG CAGACGGCTGAAGAATAGGG TCATC CCCTGCTCTCCAGCCGTTTG TTTTTTGCCTATCTC Dhaf_3734 3971316 - 3969430 - | Arylsulfotransferase TERM 5551 3969497 - 3969509 + g 71 -9.1 -3.46982 | overlap 3969495 TTTACTTGATATTTT CCGGA TAA TCCGG TCTTGTTGATATAAA Dhaf_3735 3972924 - 3971401 - | sodium/sulphate symporter TERM 5552 3972649 - 3972636 - G 75 -8.1 -4.29396 | AAGCATTGAGGAAAA CGGCT TTAA AGCCG ACAGCGCCTTGCCCG TERM 5553 3972830 - 3972816 - G 80 -2.8 -5.42514 | overlap 3972818 CCATAAACCAAAAAA TAGCCA TAA TAGCCA AACCAATCAAGCAAT Dhaf_3736 3974165 - 3973236 - | transcriptional regulator, LysR family Dhaf_3737 3975105 - 3974182 - | transcriptional regulator, LysR family Dhaf_3738 3976937 - 3975132 - | histidine kinase Dhaf_3739 3977656 - 3976964 - | two component transcriptional regulator, winged helix family Dhaf_3740 3978184 - 3977819 - | protein of unknown function UPF0102 TERM 5554 3978533 - 3978519 - R 88 -10 -4.19238 | opp_overlap 3978519 GCGTGAATCCTAAAA CCTTCC ACT GGAAGG TTTTTTCTCCGGAGT TERM 5555 3978519 - 3978533 + r 100 -10 -5.24531 | opp_overlap 3978519 GCGTGAATCCTAAAA CCTTCC ACT GGAAGG TTTTTTCTCCGGAGT TERM 5556 3979042 - 3979065 + r 79 -11 -3.02461 | opp_overlap 3979027 3979024 3979042, overlap 3979044 GGCCCCTTACGAAAA GAGCCTCAGC ATAA GCTGAGACTC TCTTAAAAGACATTA TERM 5557 3979065 - 3979042 - R 100 -13.2 -4.25104 | opp_overlap 3979042 3979044, overlap 3979027 3979024 GGCCCCTTACGAAAA GAGCCTCAGC ATAA GCTGAGACTC TCTTAAAAGACATTA Dhaf_3741 3980578 - 3979088 - | proton-translocating NADH-quinone oxidoreductase, chain N Dhaf_3742 3982137 - 3980578 - | proton-translocating NADH-quinone oxidoreductase, chain M Dhaf_3743 3984092 - 3982137 - | proton-translocating NADH-quinone oxidoreductase, chain L TERM 5558 3982905 - 3982923 + g 71 -8.8 -3.62597 | opp_overlap 3982904 3982905 CCCAATGAAGAAAGT GGTGCCGG TAA TCGGCATC TTCTTCCAGAGTCCA TERM 5559 3983188 - 3983162 - G 71 -5 -4.56597 | TGGTGGCCGCAAAAA TGGCTGTAAAGG CAC CCATTCCTGCCA CCAGCTGCAGAGCAA Dhaf_3744 3984444 - 3984112 - | NADH-ubiquinone oxidoreductase chain 4L Dhaf_3745 3984953 - 3984441 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Dhaf_3746 3985357 - 3984950 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_3747 3986417 - 3985362 - | NADH dehydrogenase (quinone) TERM 5560 3985804 - 3985794 - G 70 -2.4 -4.87892 | overlap 3985795 CTGCAAGAAAATAAA GGGC AAT GCCG CCTGTGCTTCCACGA Dhaf_3748 3987554 - 3986442 - | NADH dehydrogenase (quinone) Dhaf_3749 3988058 - 3987567 - | NADH dehydrogenase (ubiquinone) 30 kDa subunit TERM 5561 3988007 - 3988031 + g 83 -2.1 -5.58074 | gap 1 CAACAGTTCCGCTGA CGCG-GGATG CTAACT CATCCACACG TTTTTTTAATAATTC Dhaf_3750 3988569 - 3988048 - | NADH-quinone oxidoreductase, B subunit TERM 5562 3988243 - 3988217 - G 71 -6.5 -4.15106 | gap 1 TAGGAATCCGCAAAA GGGCCGCC-TGC ACTG GCACAGCTGCCC ATAGCAATAACCCAT Dhaf_3751 3988916 - 3988560 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 5563 3988779 - 3988803 + g 73 -7.9 -4.07687 | ACGTCCAATGGTTTG GTTACCACCTT CAT AGGGTGTTAAC TTTTCAGGAACCGGT Dhaf_3752 3989823 - 3989041 - | Ribonuclease H TERM 5564 3989260 - 3989274 + g 71 -4.2 -4.6644 | opp_overlap 3989256 3989255, overlap 3989255 3989262 GGCACTTAAAGCATC GCCATC GAT GATGCC TTTTTGGGGTATCTT TERM 5565 3989455 - 3989466 + g 71 -4.4 -4.71482 | AGCCTGCTCTTTGAT CTGT TGGA ACAG TTTTTCCCGTTTGCT Dhaf_3753 3990753 - 3989923 - | GTP1/OBG protein TERM 5566 3990289 - 3990303 + g 77 -8.5 -4.24887 | AATCCACTGATTGCC CCGGG TCACC CCCGG TTTATTGCCTGTCTT TERM 5567 3990621 - 3990641 + g 83 -11.9 -3.59979 | CCCCCAACATCTCCT GCAGCAGAG GGT TTCTGCTGC TTTCCGGTAAACGGG Dhaf_3754 3991289 - 3990777 - | signal peptidase I TERM 5568 3991555 - 3991534 - R 73 -2.9 -5.10033 | opp_overlap 3991547 3991552, overlap 3991552 TCAAGACAAAGAAAA CCCGACTTC ACCC GAAGACAAG GCTATCGCACTTGTT TERM 5569 3991716 - 3991697 - R 100 -11.4 -4.84311 | opp_overlap 3991697 3991696 3991694 TTGTATATAATAAAA GGGCCGGA TAGC TCCAGCCC ATCTTATTGCTAGCG Dhaf_3755 3992067 - 3991726 - | ribosomal protein L19 TERM 5570 3992143 - 3992153 + r 71 -6.8 -4.16681 | GCTTTTCACAGTGAG CGGA CCA TCCG TTTTACCGTGATATT Dhaf_3756 3992833 - 3992276 - | hypothetical protein Dhaf_3757 3993637 - 3992846 - | tRNA (guanine-N1)-methyltransferase Dhaf_3758 3994146 - 3993634 - | 16S rRNA processing protein RimM TERM 5571 3994095 - 3994113 + g 72 -10.2 -2.981 | overlap 3994094 GATAGACTTTGATTT CCCCCTGG ACT CCATGGGG CTTTATGACTTCACC TERM 5572 3994923 - 3994893 - R 74 -9.8 -3.14963 | opp_overlap 3994902, overlap 3994902 CTTACAAGCACCTAA CGTCAAAAAGGGCT TAA AGCCCTTCTCAACA CATCACTGATCAATG TERM 5573 3994902 - 3994914 + r 71 -9.1 -3.29511 | opp_overlap 3994893 3994902 ACCTAACGTCAAAAA GGGCT TAA AGCCC TTCTCAACACATCAC TERM 5574 3994914 - 3994902 - R 100 -9.1 -4.67234 | opp_overlap 3994902, overlap 3994893 ACCTAACGTCAAAAA GGGCT TAA AGCCC TTCTCAACACATCAC Dhaf_3759 3995156 - 3994926 - | hypothetical protein Dhaf_3760 3995445 - 3995179 - | ribosomal protein S16 Dhaf_3761 3996866 - 3995505 - | signal recognition particle protein Dhaf_3762 3997261 - 3996893 - | putative helix-turn-helix protein YlxM/p13 family protein Dhaf_3763 3998739 - 3997444 - | amidohydrolase Dhaf_3764 3999438 - 3998800 - | class II aldolase/adducin family protein Dhaf_3765 4000475 - 3999438 - | translation initiation factor, aIF-2BI family Dhaf_3766 4001267 - 4000491 - | purine or other phosphorylase family 1 TERM 5575 4001039 - 4001023 - G 73 -7.9 -3.96841 | overlap 4001024 CGGGAAGAAAGAGAA CCCACGG CAG CCGTGGC AATGATTTTACGGAC TERM 5576 4001038 - 4001024 - G 78 -11.4 -2.97382 | overlap 4001023 GGGAAGAAAGAGAAC CCACGG CAG CCGTGG CAATGATTTTACGGA Dhaf_3767 4002241 - 4001279 - | signal recognition particle-docking protein FtsY TERM 5577 4002095 - 4002056 - G 71 -8.6 -3.63895 | TTCAACCAGCTCAAA GGAAGTATTTACCCCCAC ATCG GAGCGGATCAATACTTCC TCCAGCTCTTCATAG TERM 5578 4002224 - 4002213 - G 100 -5.8 -5.52986 | opp_overlap 4002212 AGTTTAGTAAAAAAA CCAG CCAA CTGG ACTTCCTCCTTATAC TERM 5579 4002342 - 4002312 - R 79 -7.7 -4.40173 | opp_overlap 4002332, overlap 4002330 4002332 AGTATAAATTGAAAA GAGCTATATTCCA ACAAA TAGAATACAGCCC CTTTATTCTTCTAAT Dhaf_3768 4003955 - 4002408 - | flavocytochrome c TERM 5580 4003451 - 4003475 + g 75 -3.5 -5.01546 | opp_overlap 4003453, overlap 4003453 4003471 GATGAGCTCTTAATA CAGAATGACCG CCA TGGTAATTCAG TTTTTCTCTGAATTT TERM 5581 4003516 - 4003532 + g 83 -7.3 -4.82901 | TAATTCTGACACCAT TCCAATG CTT CGTTGGA TTTTTCTGCGACAAG Dhaf_3769 4004448 - 4003981 - | hypothetical protein TERM 5582 4005268 - 4005250 - g 73 -4.5 -4.80455 | GACGGAAATAGAAAA GCAAGCC CTCCT GGCCTAC ACCAGAGATTGGCTC TERM 5583 4005694 - 4005682 - g 70 -7.7 -3.80019 | overlap 4005674 CGATAAAGTGAACAA CAGCA TGC TGCTG GACACCTTGCGCTGC TERM 5584 4005751 - 4005741 - g 76 -8.2 -4.02075 | opp_overlap 4005741 TAAATATCAATGAAA CCGC CGA GCGG TTGTTTCTTCACATC TERM 5585 4005741 - 4005751 + G 77 -8.2 -4.21438 | opp_overlap 4005741 TAAATATCAATGAAA CCGC CGA GCGG TTGTTTCTTCACATC Dhaf_3770 4004696 - 4005910 + | transcriptional regulator, CdaR TERM 5586 4005925 - 4005973 + T 100 -10.6 -4.55287 | gap 2, opp_overlap 4005926 4005929, overlap 4005929 ATGTTTCCGTCACAA T-CAAGGACAGAT-CTTAGCTGCT TTC AGCAGCAAAGGATCTGTCCTTACA TTTTCTATAACTGAG TERM 5587 4005971 - 4005926 - T 100 -17.9 -2.57132 | gap 1, opp_overlap 4005925 4005929, overlap 4005929 TGTTTCCGTCACAAT CAAGGACAGAT-CTTAGCTGCT TTC AGCAGCAAAGGATCTGTCCTTA CATTTTCTATAACTG TERM 5588 4005929 - 4005968 + T 100 -17.4 -3.43774 | gap 1, opp_overlap 4005929 4005926, overlap 4005925 TTCCGTCACAATCAA GGACAGAT-CTTAGCTGCT TTC AGCAGCAAAGGATCTGTCC TTACATTTTCTATAA TERM 5589 4005968 - 4005929 - T 100 -17.4 -3.44146 | gap 1, opp_overlap 4005925 4005929, overlap 4005926 TTCCGTCACAATCAA GGACAGAT-CTTAGCTGCT TTC AGCAGCAAAGGATCTGTCC TTACATTTTCTATAA Dhaf_3771 4007395 - 4005998 - | Ferrous iron transport B domain protein Dhaf_3772 4008207 - 4007392 - | GTP-binding protein HSR1-related TERM 5590 4008008 - 4008066 + g 74 -11.1 -2.75838 | gap 1, overlap 4007999 4008013 TAACCCTGAGCGTTG TTCACTGTTTTGCCCGGCCAGTTGCCGG TGTG TTGGCGAA-GGCCGGTCAAAGCATTGAA TACTGTACTTTTACC TERM 5591 4008013 - 4008061 + g 70 -9.6 -3.12378 | gap 1, overlap 4008008 CTGAGCGTTGTTCAC TGTTTTGCCCGGCCAGTTGCCGG TGTG TTGGCGAA-GGCCGGTCAAAGCA TTGAATACTGTACTT TERM 5592 4008172 - 4008194 + g 78 -6.2 -4.77896 | overlap 4008174 TCTTCCTTTTGGCAT TAGGGGAGCA GTT TGATCCCCAA TTTTTAAATTCATTG Dhaf_3773 4008512 - 4008264 - | FeoA family protein TERM 5593 4008726 - 4008693 - R 100 -18.3 -3.92324 | CCCCGGAACAGCAAA GGGGCGTTTCCTGCA GTTA TACAGAAAACGCCCC CGTAAGGTGAGTGGT Dhaf_3774 4010472 - 4008748 - | methyl-accepting chemotaxis sensory transducer TERM 5594 4009408 - 4009434 + g 77 -6.5 -4.58395 | overlap 4009419 TGTGTCGATTTTGCT GCTGCCCTG AACTGCCGC CTGGGCAGC TTTTTCAGCGATCAG Dhaf_3775 4010984 - 4010469 - | FMN-binding domain protein TERM 5595 4010863 - 4010878 + g 73 -4.6 -4.68593 | overlap 4010852 4010863 TCAGCGCGGTATGTA CCGGGT ATTA ACCGGG TTTTTGACTCCTCAA TERM 5596 4011149 - 4011129 - R 73 -2.5 -5.13354 | opp_overlap 4011129 TGTACAAAAAAGAAA CGTTCAG CAAAAGC CTGACCG TTATTCAAGTCTATG Dhaf_3776 4011579 - 4011166 - | iron dependent repressor TERM 5597 4011902 - 4011873 - R 80 -9.1 -3.99374 | GTGCACCAACAACAA GACGGCTTCAGGC ATCT GCCGGTCGCCGTC TGCCAAAGATCGATA Dhaf_3777 4012883 - 4011951 - | 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Dhaf_3778 4013101 - 4013661 + | CDP-alcohol phosphatidyltransferase Dhaf_3779 4013849 - 4014052 + | hypothetical protein Dhaf_3780 4014063 - 4014437 + | hypothetical protein Dhaf_3781 4014648 - 4015088 + | C_GCAxxG_C_C family protein TERM 5598 4015178 - 4015143 - T 77 -10.7 -2.77781 | gap 1, opp_overlap 4015149 4015154 4015176, overlap 4015154 CTTGAGCAAAATCCA GAATGAAAAAAGCGGC TGTCT GCCGCTTTTCT-ATTC TATCGTTTCCGATGA TERM 5599 4015154 - 4015168 + T 100 -8.5 -4.76963 | opp_overlap 4015154 4015143, overlap 4015149 TCCAGAATGAAAAAA GCGGC TGTCT GCCGC TTTTCTATTCTATCG TERM 5600 4015168 - 4015154 - T 100 -8.5 -5.32944 | opp_overlap 4015149 4015154, overlap 4015143 TCCAGAATGAAAAAA GCGGC TGTCT GCCGC TTTTCTATTCTATCG Dhaf_3782 4017401 - 4015254 - | FMN-binding domain protein TERM 5601 4017560 - 4017506 - R 73 -3.5 -5.00616 | opp_overlap 4017517 4017520, overlap 4017512 4017517 TTTCTTGTGAAAAAA GCAACATAAAAGACCGCCGAGCAAC CAAAC GTTGCGCAGCGATCTTTTAAAAACC ACCTTGATTATTTTT TERM 5602 4017554 - 4017512 - R 100 -16.5 -3.54575 | opp_overlap 4017517 4017520, overlap 4017506 4017517 GTGAAAAAAGCAACA TAAAAGACCGCCGAGCAAC CAAAC GTTGCGCAGCGATCTTTTA AAAACCACCTTGATT TERM 5603 4017517 - 4017549 + r 76 -7.6 -4.07687 | opp_overlap 4017512 4017506 4017517, overlap 4017520 AAAAGCAACATAAAA GACCGCCGAGCAAC CAAAC GTTGCGCAGCGATC TTTTAAAAACCACCT TERM 5604 4017549 - 4017517 - R 100 -12 -4.77629 | opp_overlap 4017517 4017520, overlap 4017512 4017506 AAAAGCAACATAAAA GACCGCCGAGCAAC CAAAC GTTGCGCAGCGATC TTTTAAAAACCACCT Dhaf_3783 4018437 - 4017568 - | transcriptional regulator, LysR family Dhaf_3784 4020173 - 4018668 - | methyl-accepting chemotaxis sensory transducer TERM 5605 4020020 - 4019993 - G 85 -9.8 -4.35926 | gap 1, overlap 4020014 ATTTTAAATTGAAAA GCAGCGCCAG-GG TTG CCACAAGCGCTGC TCCAAAGGTGCAGGC Dhaf_3785 4021005 - 4020211 - | hypothetical protein Dhaf_3786 4022275 - 4021037 - | major facilitator superfamily MFS_1 TERM 5606 4021933 - 4021921 - G 79 -3.3 -5.24129 | overlap 4021924 TCGCGTCATAAAAAA TCAGG CTG CCGGA AAATCCGGACTTGCC TERM 5607 4022406 - 4022430 + r 75 -5.7 -4.59376 | opp_overlap 4022406, overlap 4022401 AAATATCAGAAAAAA CTCAAACATCC TGT GGATATCTGAG TTTTCCTTTAATCAT TERM 5608 4022430 - 4022406 - R 100 -10.1 -5.38321 | opp_overlap 4022406 4022401 AAATATCAGAAAAAA CTCAAACATCC TGT GGATATCTGAG TTTTCCTTTAATCAT Dhaf_3787 4024381 - 4022528 - | peptidase M56 BlaR1 TERM 5609 4023126 - 4023113 - G 75 -8.1 -4.19735 | GTTTTCAAAACCAAA CCAGC CGAT GCTGG CTACGGTGTAGGCAA TERM 5610 4023486 - 4023510 + g 73 -2.3 -5.1244 | gap 1, opp_overlap 4023486, overlap 4023486 4023487 CGTTCATCGACCATA C-CGATTAAT CTCGGC ATTAATCGCG TTTTTGTATTGATCG TERM 5611 4023976 - 4023963 - G 70 -2.3 -4.98531 | CCGGCAAAGGAAAAA CCGGC ATAG ACCAG CCAGACAAACATCAA Dhaf_3788 4024758 - 4024384 - | transcriptional repressor, CopY family Dhaf_3789 4025011 - 4025856 + | hypothetical protein Dhaf_3790 4026040 - 4026720 + | transcriptional regulator, Crp/Fnr family TERM 5612 4026748 - 4026787 + F 91 -13 -2.74488 | opp_overlap 4026728 4026753 4026757 4026758 4026760, overlap 4026758 4026778 4026781 AATAAAATAGTTTTT ATAGACAAAGGAGAGCGA AAAT TCGCTCTCTTTTGTCAAC TGATTGACATAATTC TERM 5613 4026782 - 4026753 - f 93 -13.7 -2.88427 | opp_overlap 4026748 4026758 4026778 4026781, overlap 4026728 4026757 4026758 4026760 AATAGTTTTTATAGA CAAAGGAGAGCGA AAAT TCGCTCTCTTTTG TCAACTGATTGACAT TERM 5614 4026778 - 4026757 - f 83 -8.7 -4.12532 | opp_overlap 4026748 4026758, overlap 4026753 4026758 4026760 GTTTTTATAGACAAA GGAGAGCGA AAAT TCGCTCTCT TTTGTCAACTGATTG TERM 5615 4026777 - 4026758 - f 86 -12.2 -3.07198 | opp_overlap 4026748 4026758, overlap 4026757 4026753 4026760 TTTTTATAGACAAAG GAGAGCGA AAAT TCGCTCTC TTTTGTCAACTGATT TERM 5616 4026758 - 4026777 + F 100 -12.2 -4.41206 | opp_overlap 4026758 4026757 4026753 4026760, overlap 4026748 TTTTTATAGACAAAG GAGAGCGA AAAT TCGCTCTC TTTTGTCAACTGATT Dhaf_3791 4026884 - 4027372 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 5617 4028653 - 4028628 - g 70 -2.5 -4.87291 | gap 1, overlap 4028632 CAGGTTAAGGAAAAA GCTATCGTCGGT TTC AGCGCCGA-AGC GGTAATCGGAGCCTT TERM 5618 4028938 - 4028956 + G 71 -8.8 -3.65529 | AGGCTGTCCTGACGG CCATCGGC CAG GCCAATGG TTTAAATGGCCCTCT Dhaf_3792 4027419 - 4029326 + | carbon-monoxide dehydrogenase, catalytic subunit Dhaf_3793 4029352 - 4030137 + | Cobyrinic acid ac-diamide synthase TERM 5619 4030158 - 4030200 + T 83 -10.7 -3.56558 | gap 1, opp_overlap 4030160, overlap 4030160 AAGCCCTCATAAGCA AACAGAGTCCTGAATAGCCG GAGG TGGCC-TTCAGGACTCTGTC TTATCTCCATTCTAA TERM 5620 4030198 - 4030160 - T 100 -14.8 -3.9941 | gap 1, opp_overlap 4030158 4030160 GCCCTCATAAGCAAA CAGAGTCCTGAATAGCC GGAGGT GGCC-TTCAGGACTCTG TCTTATCTCCATTCT TERM 5621 4030160 - 4030198 + T 100 -13.3 -3.35384 | gap 1, opp_overlap 4030160, overlap 4030158 GCCCTCATAAGCAAA CAGAGTCCTGAATAGCCG GAGG TGGCC-TTCAGGACTCTG TCTTATCTCCATTCT Dhaf_3794 4030935 - 4030201 - | ABC transporter related Dhaf_3795 4031713 - 4030925 - | polar amino acid ABC transporter, inner membrane subunit TERM 5622 4031866 - 4031825 - R 100 -11.5 -4.13945 | opp_overlap 4031832, overlap 4031832 ATCCTTACCGCAAAA TCGAGAACTCCGCGCCGCA ATGC TGCGGCACGGAGTTTGCAC GGCAATCCATGACTT TERM 5623 4031832 - 4031859 + r 100 -17 -3.53444 | opp_overlap 4031825 4031832 CCGCAAAATCGAGAA CTCCGCGCCGCA ATGC TGCGGCACGGAG TTTGCACGGCAATCC TERM 5624 4031859 - 4031832 - R 100 -19.2 -3.52113 | opp_overlap 4031832, overlap 4031825 CCGCAAAATCGAGAA CTCCGCGCCGCA ATGC TGCGGCACGGAG TTTGCACGGCAATCC Dhaf_3796 4032746 - 4031901 - | extracellular solute-binding protein family 3 Dhaf_3797 4033617 - 4034039 + | hypothetical protein TERM 5625 4034041 - 4034055 + T 95 -7.1 -5.44119 | AAATGCAACCTTAAG CAGCC CTAGT GGCTG TTTTTTTGCCATCAA TERM 5626 4034235 - 4034194 - T 100 -8.9 -5.0133 | opp_overlap 4034199, overlap 4034199 TATTGCTTGAAAAAA TCAAAGGATACCTCTCTTT ACAA AAAGAGGAGTATCCTTCTA TCTACCTTATCCCTA TERM 5627 4034199 - 4034230 + T 84 -11 -3.62384 | opp_overlap 4034194 4034199 CTTGAAAAAATCAAA GGATACCTCTCTTT ACAA AAAGAGGAGTATCC TTCTATCTACCTTAT TERM 5628 4034230 - 4034199 - T 100 -11 -4.42765 | opp_overlap 4034199, overlap 4034194 CTTGAAAAAATCAAA GGATACCTCTCTTT ACAA AAAGAGGAGTATCC TTCTATCTACCTTAT Dhaf_3798 4035024 - 4034248 - | alpha/beta hydrolase fold protein Dhaf_3799 4036623 - 4035376 - | transposase IS116/IS110/IS902 family protein TERM 5629 4035806 - 4035821 + g 73 -3.3 -4.9138 | TGCCTGATTTCTGCT TCGAT TGCCTT ATCGA TTTTCTTTACCTGCT Dhaf_3800 4037262 - 4037948 + | hypothetical protein TERM 5630 4037959 - 4037981 + T 71 -7 -4.13561 | overlap 4037964 AGTAATGCTGTTAGC TCAAGCCCCT CAA AGGAGTTTGA TATTTTTTGGGAGAC Dhaf_3801 4038618 - 4037968 - | hypothetical protein Dhaf_3802 4039409 - 4038744 - | ABC transporter related Dhaf_3803 4040671 - 4039406 - | protein of unknown function DUF214 Dhaf_3804 4041827 - 4040691 - | protein of unknown function DUF214 TERM 5631 4041145 - 4041169 + g 72 -10.1 -3.07043 | ATGGCGTCTTTATCC ACTTGAAGGAT TTT ATCCTTCAAGG TATTAAAATCATCCA TERM 5632 4042020 - 4042034 + r 78 -7.2 -4.44667 | opp_overlap 4042032 CAACCTCCCCTTTTA CAAATC TAA GATTTG TTTATTGTTACAAAC Dhaf_3805 4043062 - 4042025 - | hypothetical protein Dhaf_3806 4044281 - 4043763 - | VanZ family protein TERM 5633 4044258 - 4044270 + g 95 -3.5 -5.92337 | opp_overlap 4044247 4044258, overlap 4044247 AACATATATTAGCAA TATAA TTT TTATA TTTTTTTTCATATCT TERM 5634 4044414 - 4044444 + r 100 -15.6 -3.66654 | opp_overlap 4044419, overlap 4044419 ATTCTGCGCTCAACC TAAAAGCAGGGTGA AAA TCACCCCGCTTTTA TTTCACCTTAGCATA TERM 5635 4044419 - 4044439 + r 100 -11.1 -4.90525 | opp_overlap 4044419, overlap 4044414 GCGCTCAACCTAAAA GCAGGGTGA AAA TCACCCCGC TTTTATTTCACCTTA TERM 5636 4044439 - 4044419 - R 100 -13.3 -4.27316 | opp_overlap 4044414 4044419 GCGCTCAACCTAAAA GCAGGGTGA AAA TCACCCCGC TTTTATTTCACCTTA Dhaf_3807 4045697 - 4044669 - | hypothetical protein Dhaf_3808 4046541 - 4045717 - | Peptidase M23 TERM 5637 4046031 - 4046048 + g 74 -9.9 -3.57263 | overlap 4046022 TACTACTTCTTCCAA GGAATCC TTCC GGATTCC TTTGGGCATACCAGT Dhaf_3809 4047261 - 4047698 + | hypothetical protein TERM 5638 4047754 - 4047715 - T 75 -10.2 -2.86164 | opp_overlap 4047714 4047715 4047718 4047723, overlap 4047723 AGGAGTAAGGAACCA TGAGAAAAGCAGGAGC GCATCAAA ACTCCTGCTTTTCTGA ATTGTATTTTCTAAA TERM 5639 4047715 - 4047754 + T 71 -9.5 -3.00825 | opp_overlap 4047715 4047723, overlap 4047714 4047718 4047723 AGGAGTAAGGAACCA TGAGAAAAGCAGGAG CGCATCAAAA CTCCTGCTTTTCTGA ATTGTATTTTCTAAA TERM 5640 4047718 - 4047751 + T 76 -11.2 -2.71742 | opp_overlap 4047715 4047723, overlap 4047715 4047714 4047723 AGTAAGGAACCATGA GAAAAGCAGGAG CGCATCAAAA CTCCTGCTTTTC TGAATTGTATTTTCT TERM 5641 4047723 - 4047746 + T 70 -5.3 -4.49939 | opp_overlap 4047715 4047723, overlap 4047718 4047715 4047714 GGAACCATGAGAAAA GCAGGAG CGCATCAAAA CTCCTGC TTTTCTGAATTGTAT TERM 5642 4047746 - 4047723 - T 73 -6 -4.51097 | opp_overlap 4047723 4047718 4047715 4047714, overlap 4047715 GGAACCATGAGAAAA GCAGGAGC GCATCAAA ACTCCTGC TTTTCTGAATTGTAT Dhaf_3810 4048645 - 4047776 - | hypothetical protein TERM 5643 4048331 - 4048319 - G 78 -5.5 -4.88646 | opp_overlap 4048320 AAAAATCAAAATAAA GGCTG CGG CAACC TGAGCTATTCTTTTT Dhaf_3811 4049283 - 4048729 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 5644 4049672 - 4049648 - R 73 -5.8 -4.4874 | gap 1, overlap 4049663 TTTAAAAAGCCAAAA GATGC-CCTCT TTAA AGAGAAGCATC CTCTTCAACTTAACT Dhaf_3812 4053356 - 4049760 - | chromosome segregation protein SMC TERM 5645 4049860 - 4049819 - G 74 -11 -2.9039 | gap 1, opp_overlap 4049818 4049821, overlap 4049821 AGAGCAGCTTAGATA CACCCGAC-TCCTCCATGG TGATG CCATAGAGGACATCGGCTG CTTCCATGGTTCCTT TERM 5646 4053051 - 4053075 + g 78 -10.8 -3.29511 | gap 1 GATCACTTCCTGATA CTCCA-GGGGA AAAA TCCCCGTGGAG TTATCAAAAAATAAG Dhaf_3813 4054137 - 4053349 - | Ribonuclease III TERM 5647 4053569 - 4053599 + g 85 -9.6 -4.3255 | opp_overlap 4053569, overlap 4053571 AGCATGGTCTTATAA TCGCCGTAGTTGCC TTG GGCTACTTCGGCAA TTTCTTCCTTCAGCA TERM 5648 4053599 - 4053569 - G 82 -11.8 -3.2963 | opp_overlap 4053569 4053571 AGCATGGTCTTATAA TCGCCGTAGTTGCC TTG GGCTACTTCGGCAA TTTCTTCCTTCAGCA TERM 5649 4053571 - 4053597 + g 78 -12.2 -2.50947 | opp_overlap 4053569, overlap 4053569 CATGGTCTTATAATC GCCGTAGTTGCC TTG GGCTACTTCGGC AATTTCTTCCTTCAG Dhaf_3814 4055396 - 4054158 - | 3-oxoacyl-(acyl-carrier-protein) synthase 2 Dhaf_3815 4056389 - 4055445 - | 2-nitropropane dioxygenase NPD TERM 5650 4056578 - 4056607 + r 79 -10.7 -3.00298 | opp_overlap 4056578 4056582, overlap 4056582 GAAGAGAGCTTTAAA GAAAGTCCCGCAG TATT CTACGGGACTCTC TATGTACTTAGGGGA TERM 5651 4056607 - 4056578 - R 100 -15.1 -3.60948 | opp_overlap 4056578 4056582, overlap 4056582 GAAGAGAGCTTTAAA GAAAGTCCCGCAG TATT CTACGGGACTCTC TATGTACTTAGGGGA TERM 5652 4056582 - 4056603 + r 74 -10.1 -3.08278 | opp_overlap 4056578 4056582, overlap 4056578 AGAGCTTTAAAGAAA GTCCCGCAG TATT CTACGGGAC TCTCTATGTACTTAG TERM 5653 4056603 - 4056582 - R 100 -12.3 -4.43208 | opp_overlap 4056582 4056578, overlap 4056578 AGAGCTTTAAAGAAA GTCCCGCAG TATT CTACGGGAC TCTCTATGTACTTAG Dhaf_3816 4056859 - 4056632 - | acyl carrier protein Dhaf_3817 4057641 - 4056898 - | 3-oxoacyl-(acyl-carrier-protein) reductase Dhaf_3818 4058588 - 4057647 - | malonyl CoA-acyl carrier protein transacylase Dhaf_3819 4059554 - 4058607 - | enoyl-(acyl-carrier-protein) reductase II Dhaf_3820 4060553 - 4059558 - | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 5654 4060233 - 4060209 - G 71 -2.7 -4.83615 | opp_overlap 4060218, overlap 4060210 4060211 TACTCCGTATAAAAA TCCCGTGCAGG CGG CCTGCAGGTCA AAACCGGCCGCCTTT TERM 5655 4060218 - 4060245 + g 77 -6.9 -4.65895 | opp_overlap 4060211 4060210 4060209 4060237 TAAAAATCCCGTGCA GGCGGCCTG CAGGTCAAAA CCGGCCGCC TTTTTGGCTCCCAGG Dhaf_3821 4061598 - 4060594 - | fatty acid/phospholipid synthesis protein PlsX TERM 5656 4061077 - 4061089 + g 80 -9.1 -4.18018 | opp_overlap 4061077 4061076 CCCGATATTTAAAAG CCCCA CTT TGGGG TTTTGGATACCCAGG Dhaf_3822 4062186 - 4061617 - | fatty acid biosynthesis transcriptional regulator TERM 5657 4062341 - 4062322 - R 100 -8.6 -5.28315 | AGAAAATGCAAAAAA GCACAGTC AAAC GACTATGC CTTAAAATCCAATTT Dhaf_3823 4063917 - 4062478 - | hypothetical protein TERM 5658 4064039 - 4064008 - R 82 -3 -5.46657 | CATCTCAATAAAAAA CGGCTCAAACGA AGAATAAA CCGTTCAAACCG TTGCTATAATTGTAT TERM 5659 4064244 - 4064228 - R 100 -8 -5.95539 | opp_overlap 4064228 TTTGAAATAAAAAAA GAAGCC CTTCC GGCTTC TTTCTCTTGACCTTA TERM 5660 4064228 - 4064244 + r 76 -8 -4.21439 | opp_overlap 4064228 TTTGAAATAAAAAAA GAAGCC CTTCC GGCTTC TTTCTCTTGACCTTA Dhaf_3824 4064436 - 4064257 - | ribosomal protein L32 Dhaf_3825 4064976 - 4064467 - | protein of unknown function DUF177 Dhaf_3826 4066241 - 4065042 - | acetate kinase Dhaf_3827 4067214 - 4066453 - | Patatin TERM 5661 4066565 - 4066585 + g 74 -4 -5.0065 | ATATGACCGACTTCA GGCTGA ATCAATACA TCAGCC TTTTCTTTCTGGGTG Dhaf_3828 4067293 - 4068447 + | nucleoside recognition domain protein Dhaf_3829 4069188 - 4068655 - | hypothetical protein Dhaf_3830 4069727 - 4069185 - | methyltransferase TERM 5662 4069595 - 4069609 + g 88 -7 -5.14563 | opp_overlap 4069595, overlap 4069595 CAAACAAATCCAAAA CCCGGG CAC CCGGGG TTTTTTCCTGCAGCA TERM 5663 4069595 - 4069608 + g 76 -9.5 -3.68256 | opp_overlap 4069595, overlap 4069595 CAAACAAATCCAAAA CCCGG GCAC CCGGG GTTTTTTCCTGCAGC TERM 5664 4069608 - 4069595 - G 85 -9.5 -4.45261 | opp_overlap 4069595 4069595 CAAACAAATCCAAAA CCCGG GCAC CCGGG GTTTTTTCCTGCAGC TERM 5665 4069937 - 4069959 + H 100 -9.9 -5.83822 | TTTTCTCCTCTCTGG TCACTGGTC GCGAG GGCCAGTGA TTTTTTTTCACTATC TERM 5666 4070045 - 4070031 - g 75 -3.5 -5.04385 | TATATTTTGAAAAAA GCAGA TCTAT TCCGC AATTTTAATGTAACT Dhaf_3831 4070022 - 4071008 + | spore protease TERM 5667 4071037 - 4071010 - T 75 -10.6 -2.82142 | gap 1, opp_overlap 4071015, overlap 4071009 4071012 TGTATATGCAATAAT CATGACCACCCGC TCA GCGGGTGGTT-TG CTCTAGCCCTATAAG TERM 5668 4071036 - 4071012 - T 73 -9.9 -2.95586 | opp_overlap 4071015, overlap 4071010 4071009 TATATGCAATAATCA TGACCACCCGC TCA GCGGGTGGTTT GCTCTAGCCCTATAA TERM 5669 4071015 - 4071033 + T 100 -16 -3.83502 | opp_overlap 4071012 4071010 4071009 ATGCAATAATCATGA CCACCCGC TCA GCGGGTGG TTTGCTCTAGCCCTA Dhaf_3832 4071611 - 4071009 - | transposase IS200-family protein TERM 5670 4071713 - 4071731 + r 100 -14.6 -5.18371 | opp_overlap 4071716 TAAAGCTTCTTGGAA CCACCTGC ATA GCAGGTGG TTTTCTTTTATACAA TERM 5671 4071753 - 4071773 + r 93 -11.2 -4.19817 | opp_overlap 4071753 TTTATACAACAAGAA GAGAGCGA TGACC TCGCTCTC TTTTGGCTGAATCCA TERM 5672 4071773 - 4071753 - R 90 -11.2 -4.06864 | opp_overlap 4071753 TTTATACAACAAGAA GAGAGCGA TGACC TCGCTCTC TTTTGGCTGAATCCA Dhaf_3833 4071915 - 4071793 - | hypothetical protein Dhaf_3834 4074472 - 4072055 - | ATP-dependent DNA helicase RecG TERM 5673 4073656 - 4073638 - G 76 -11.7 -2.78384 | opp_overlap 4073637 CTGTTTCCGAGTAGA CCGGCAG GATGG CTGCCGG CTGTGCTGCTCCTGC Dhaf_3835 4075332 - 4074469 - | L-serine dehydratase, iron-sulfur-dependent, alpha subunit Dhaf_3836 4076044 - 4075373 - | L-serine dehydratase, iron-sulfur-dependent, beta subunit TERM 5674 4076111 - 4076088 - R 100 -12.4 -4.62783 | opp_overlap 4076084 4076080 4076089, overlap 4076089 TATTGATTGTAAAAA CCCCTCCGGA TGGC TCCGGAGGGT ATCGTTCATTGCCTA TERM 5675 4076110 - 4076089 - R 100 -15.9 -3.37188 | opp_overlap 4076084 4076080 4076089, overlap 4076088 ATTGATTGTAAAAAC CCCTCCGGA TGGC TCCGGAGGG TATCGTTCATTGCCT TERM 5676 4076089 - 4076110 + r 100 -15.9 -2.97166 | opp_overlap 4076089 4076088, overlap 4076084 4076080 ATTGATTGTAAAAAC CCCTCCGGA TGGC TCCGGAGGG TATCGTTCATTGCCT Dhaf_3837 4077809 - 4076127 - | Dak phosphatase Dhaf_3838 4078308 - 4077952 - | protein of unknown function DUF322 Dhaf_3839 4078588 - 4078779 + | ribosomal protein L28 TERM 5677 4078813 - 4078836 + T 100 -9.6 -4.86862 | TAGAGTGTAACTTGG CTGGTATCGT TATG ACGGTGCCAG TTTTAGTTTTTTAGA TERM 5678 4078852 - 4078869 + T 100 -10.5 -5.80951 | TTTTAGTTTTTTAGA GCCTGGG GAAA CCCGGGC TTTTTTCTTTTGGCT TERM 5679 4079024 - 4079048 + T 100 -13.7 -3.89346 | overlap 4079020 TCCTGCTCAATGGGC GGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCTGCGGG Dhaf_3840 4080488 - 4079604 - | Hsp33 protein TERM 5680 4079761 - 4079788 + g 73 -3.4 -5.00616 | gap 1, overlap 4079750 4079747 4079764 CTGACCCGCTCTTTG GAGCAGGTGCATT TGT ACTGCACCGG-TC TTTTTTCCAGAACAC Dhaf_3841 4081227 - 4080532 - | thiamine pyrophosphokinase Dhaf_3842 4081898 - 4081224 - | Ribulose-phosphate 3-epimerase Dhaf_3843 4082790 - 4081900 - | ribosome small subunit-dependent GTPase A TERM 5681 4082407 - 4082390 - G 90 -9.1 -4.56775 | opp_overlap 4082400 AGCTGCCGGTAAAAA TCCAGCC CATC GGCCGGA AAGGTGTTCTCGGCG Dhaf_3844 4084566 - 4082827 - | serine/threonine protein kinase with PASTA sensor(s) Dhaf_3845 4085981 - 4084563 - | Peptidoglycan glycosyltransferase Dhaf_3846 4087264 - 4085978 - | cell cycle protein Dhaf_3847 4087988 - 4087269 - | protein serine/threonine phosphatase Dhaf_3848 4088418 - 4087969 - | FHA domain containing protein TERM 5682 4088202 - 4088217 + g 78 -6.1 -4.7497 | CGTTATTTTTCCCGC GGCCT ATTTTC AGGCC TTTTTGGTCAATGCG TERM 5683 4088272 - 4088256 - G 81 -12.3 -3.08679 | GGCCTTTAGGCAACA GCTCTCC TCC GGAGAGC ACTTCAAAGCGCCCA Dhaf_3849 4089270 - 4088467 - | FHA domain containing protein Dhaf_3850 4090340 - 4089267 - | radical SAM enzyme, Cfr family TERM 5684 4090139 - 4090164 + g 71 -7.5 -4.11394 | TGACTTTTCTTAGAG GCTGCAAGAAG AGGC CCTCCTGCAGC TTTTGCCGATCCCCT TERM 5685 4090391 - 4090360 - R 78 -9.4 -3.64822 | ATCTTTCCACCTAAA CTTCCACCCGGCGA AATT TCGCCAGGAAAAAG CCATCCATACCCTGT Dhaf_3851 4091716 - 4090355 - | sun protein Dhaf_3852 4092715 - 4091753 - | methionyl-tRNA formyltransferase Dhaf_3853 4093750 - 4093298 - | peptide deformylase Dhaf_3854 4096244 - 4093917 - | primosomal protein N' TERM 5686 4094367 - 4094387 + g 90 -13.9 -3.05596 | CCCGGGTTTTTGACT GCGGCCGGC CCG GCCGGCCAC TTGGGTCAGAAGCTG TERM 5687 4095089 - 4095061 - G 72 -10.3 -3.05596 | TAGGCTTCCAGCGAA GGGGTAGCGCTTC CCA AAAGCACTACTCC CCGGAGCTGTTCCAT TERM 5688 4095228 - 4095218 - G 71 -4.6 -4.57569 | overlap 4095219 GCAGCGGGGCAAAAA CCGC CGA ACGG GCCCCGACGACAATC TERM 5689 4096304 - 4096353 + r 77 -6.5 -4.61873 | opp_overlap 4096304, overlap 4096307 CTCACAGAGGATAAG GGCGACTTAGCTTCAGATGGAGT TAAA ACTCCGTTTGAATCTAAATCTAC TTTTACTTTATCACA TERM 5690 4096307 - 4096350 + r 81 -11.2 -3.23921 | opp_overlap 4096304, overlap 4096304 ACAGAGGATAAGGGC GACTTAGCTTCAGATGGAGT TAAA ACTCCGTTTGAATCTAAATC TACTTTTACTTTATC TERM 5691 4096441 - 4096417 - R 100 -10 -4.70266 | AACATGATCCAAAAA GGGATGCCGG CTTTT CCAACATCCC CGAACCTTTCATCTA Dhaf_3855 4096789 - 4096469 - | protein of unknown function DUF74 TERM 5692 4097102 - 4097131 + H 100 -13.7 -5.83211 | opp_overlap 4097074 4097073, overlap 4097074 CTATGTGCATGGACA CCTCTTTCTTGCT TGCG GGCAAGGAAGAGG TTTTTTGTTTTACTA TERM 5693 4097248 - 4097267 + G 72 -5.7 -4.37658 | GTTTTCGCTATGTTC GGAGCCA CGGTAC TGGTTCC TTTTCTCACCGGATT Dhaf_3856 4097164 - 4098408 + | uracil-xanthine permease TERM 5694 4098463 - 4098429 - f 100 -13.8 -3.71649 | gap 1, opp_overlap 4098429 CCGTTAAACGCCAAA GCCTTAGAGAGACTG ACATTA CAGTC-CTCTAAGGC TTTTTTGATCGTTCC TERM 5695 4098429 - 4098463 + F 100 -13.8 -5.2189 | gap 1, opp_overlap 4098429 CCGTTAAACGCCAAA GCCTTAGAGAGACTG ACATTA CAGTC-CTCTAAGGC TTTTTTGATCGTTCC Dhaf_3857 4098590 - 4098982 + | HEPN domain protein Dhaf_3858 4098958 - 4099269 + | DNA polymerase beta domain protein region TERM 5696 4099363 - 4099419 + T 100 -27.9 -3.11476 | gap 1, opp_overlap 4099367 4099374, overlap 4099364 4099367 GCCTGAGACCACCCT TAAATGCCAAAGCCTTAGAGAGACTG ACATTA CAGTC-CTCTAAGGCTTTGGCATTTA TAATTTTCCATCGCT TERM 5697 4099415 - 4099367 - T 100 -24.3 -3.5882 | gap 1, opp_overlap 4099363 4099364 4099367, overlap 4099374 GAGACCACCCTTAAA TGCCAAAGCCTTAGAGAGACTG ACATTA CAGTC-CTCTAAGGCTTTGGCA TTTATAATTTTCCAT TERM 5698 4099367 - 4099415 + T 100 -24.3 -4.21402 | gap 1, opp_overlap 4099367 4099374, overlap 4099363 4099364 GAGACCACCCTTAAA TGCCAAAGCCTTAGAGAGACTG ACATTA CAGTC-CTCTAAGGCTTTGGCA TTTATAATTTTCCAT TERM 5699 4099408 - 4099374 - T 100 -13.8 -3.71649 | gap 1, opp_overlap 4099367 4099363 4099364, overlap 4099367 CCCTTAAATGCCAAA GCCTTAGAGAGACTG ACATTA CAGTC-CTCTAAGGC TTTGGCATTTATAAT Dhaf_3859 4100223 - 4099558 - | hypothetical protein Dhaf_3860 4100899 - 4100216 - | glycosyl transferase family 2 Dhaf_3861 4101879 - 4100896 - | Radical SAM domain protein Dhaf_3862 4102215 - 4101883 - | alkylhydroperoxidase like protein, AhpD family Dhaf_3863 4102979 - 4102230 - | hypothetical protein Dhaf_3864 4103638 - 4102976 - | SNARE associated Golgi protein Dhaf_3865 4104341 - 4103628 - | SNARE associated Golgi protein TERM 5700 4104029 - 4104006 - G 73 -7.4 -4.27316 | gap 1, overlap 4104009 4104011 GCGGGCAAGCCAAAA GCAGATGGCCG CTC CGGCCATG-GC GCTGGACCAGGAGAG TERM 5701 4104025 - 4104011 - G 79 -11.4 -3.12352 | overlap 4104009 4104006 CAAGCCAAAAGCAGA TGGCCG CTC CGGCCA TGGCGCTGGACCAGG TERM 5702 4104382 - 4104417 + r 100 -14.8 -3.93256 | GGCACAATGTGCTAA GGGCTGCCAGGG AAAGCAATAACC CCCTGGCAGCCC TTCTTTAGCCGTATC Dhaf_3866 4105047 - 4104547 - | Rhodanese domain protein TERM 5703 4106441 - 4106429 - g 73 -7.7 -3.97042 | overlap 4106425 CGATGATGAAGGAAA CATGG TGT CCATG ATTCAGAGCAATTAT Dhaf_3867 4105332 - 4106939 + | Gamma-glutamyltransferase TERM 5704 4107039 - 4106981 - T 100 -13 -3.737 | gap 3, opp_overlap 4106985, overlap 4106985 TAAGCCTGGACTAAA TGAATTTGGCCGTTTTG-GATTGACTCAT CCAG ATGAGTCGATCTCAAAACGGCCAAATT-- TTATCCCCCCTAGGA TERM 5705 4107037 - 4106985 - T 100 -23.2 -3.56704 | gap 1, opp_overlap 4106985, overlap 4106981 CCTGGACTAAATGAA TTTGGCCGTTTTG-GATTGACTCAT CCAG ATGAGTCGATCTCAAAACGGCCAAA TTTTATCCCCCCTAG TERM 5706 4106985 - 4107037 + T 100 -25.4 -4.37886 | gap 1, opp_overlap 4106981 4106985 CCTGGACTAAATGAA TTTGGCCGTTTTG-GATTGACTCAT CCAG ATGAGTCGATCTCAAAACGGCCAAA TTTTATCCCCCCTAG Dhaf_3868 4108413 - 4107049 - | histidine kinase TERM 5707 4108269 - 4108291 + g 90 -7.7 -5.011 | opp_overlap 4108269 GGCCGTCGGCAATGA CGGAAACCC GGTAA GAGTTTCCG TTTTCTTGTTTAGCT Dhaf_3869 4109129 - 4108410 - | two component transcriptional regulator, winged helix family TERM 5708 4108974 - 4108997 + g 91 -9.6 -4.56133 | opp_overlap 4108967 4108965, overlap 4108967 CAAAATCACAACCTG GGGCTGTTCT GTTT GGAACAGCTC TTTTGCTTGTTGGCA TERM 5709 4109307 - 4109295 - g 78 -7.7 -4.33274 | CTGATATTATCAAAA CACAG GGT CTGTG TAAGCACTATGGCAA TERM 5710 4109956 - 4109946 - g 73 -2.4 -5.14563 | CCCTGCACCAAAAAA GCAG CCC CAGC ATAGCCATCCGCACT Dhaf_3870 4109276 - 4110190 + | ABC transporter related Dhaf_3871 4110187 - 4110939 + | hypothetical protein Dhaf_3872 4110942 - 4111676 + | hypothetical protein TERM 5711 4111669 - 4111681 + T 74 -10.5 -2.71712 | opp_overlap 4111652, overlap 4111668 GGCGTGATGTTCACA CCGGC TGA GCCGG GTTTGCGGAAAGGGG TERM 5712 4111721 - 4111773 + T 100 -26.8 -4.56597 | gap 1, opp_overlap 4111721 ATAGCTAAATGAAAA TTCGGCCGTTTTGCGATGGATTCAT CTAG ATGAGTCCATC-CAAAACGGCCGAA TTTTTAAGCAAAGAA TERM 5713 4111773 - 4111721 - T 100 -24.6 -4.57516 | gap 1, opp_overlap 4111721 ATAGCTAAATGAAAA TTCGGCCGTTTTGCGATGGATTCAT CTAG ATGAGTCCATC-CAAAACGGCCGAA TTTTTAAGCAAAGAA TERM 5714 4111837 - 4111861 + T 71 -4.3 -4.88293 | overlap 4111839 CAGTCGATGTCTGAA TGGCTAACGGT TTC ATTGTTGGCTA TTTCTTTTTCGGCTT Dhaf_3873 4112027 - 4111815 - | hypothetical protein Dhaf_3874 4112302 - 4112042 - | plasmid stabilization system Dhaf_3875 4112603 - 4112872 + | prevent-host-death family protein Dhaf_3876 4112859 - 4113167 + | addiction module toxin, RelE/StbE family TERM 5715 4113259 - 4113213 - gT 70 -7.2 -3.75005 | opp_overlap 4113217 4113221 4113256, overlap 4113211 4113218 4113221 AAAATTCAACAAAGA TCAGAGAACCCTGGCCCCTC GATTGAT GAGTGGTCAGGGTTCCTTGC TGCCCTCAGCAATTA TERM 5716 4113217 - 4113255 + GT 84 -11.7 -3.16564 | opp_overlap 4113213 4113211 4113218 4113221, overlap 4113221 TTCAACAAAGATCAG AGAACCCTGGCCCCTCG ATTGA TGAGTGGTCAGGGTTCC TTGCTGCCCTCAGCA TERM 5717 4113254 - 4113218 - gT 93 -12.3 -3.01906 | opp_overlap 4113217 4113221, overlap 4113213 4113211 4113221 TCAACAAAGATCAGA GAACCCTGGCCCCTC GATTGAT GAGTGGTCAGGGTTC CTTGCTGCCCTCAGC TERM 5718 4113251 - 4113221 - gT 73 -8.2 -3.63138 | opp_overlap 4113217 4113221, overlap 4113218 4113213 4113211 ACAAAGATCAGAGAA CCCTGGCCCCTC GATTGAT GAGTGGTCAGGG TTCCTTGCTGCCCTC TERM 5719 4113221 - 4113251 + GT 81 -11.1 -3.40371 | opp_overlap 4113221 4113218 4113213 4113211, overlap 4113217 ACAAAGATCAGAGAA CCCTGGCCCCTCG ATTGA TGAGTGGTCAGGG TTCCTTGCTGCCCTC TERM 5720 4113256 - 4113271 + GT 70 -7.6 -3.61398 | opp_overlap 4113213 4113211 AGTGGTCAGGGTTCC TTGCTG CCCT CAGCAA TTATTGACGCCAAGC Dhaf_3878 4113975 - 4113265 - | Vitamin B12 dependent methionine synthase activation region Dhaf_3877 4113160 - 4113354 + | hypothetical protein Dhaf_3879 4115840 - 4113990 - | ferredoxin TERM 5721 4114682 - 4114672 - G 76 -8.2 -4.07568 | overlap 4114673 TGGGCTCCTTCAAAA GCCG GAC CGGC CGCTGCGGAACAGGC TERM 5722 4114767 - 4114754 - G 71 -6.7 -4.28254 | opp_overlap 4114754 TGCCAATATCCAAAA TCAGG GTAA CCTGA TCCCTTTTCTCCAGA TERM 5723 4115369 - 4115317 - G 71 -10.3 -2.86475 | GAACCGTACACTACA GTTGTCACCCGGTTGGCGGACTCCC TTA GGGTGTCCGGCAGCCGGCGGAGCAC GGAGAGAGGGGCCTG TERM 5724 4115713 - 4115736 + g 72 -11 -2.62983 | CGGCATTTCCCGCAC TTCCCCCTGC CTCC GCAGGGGAAA TCCTCTCCCAGTCCC TERM 5725 4115903 - 4115883 - R 76 -6.9 -4.54727 | opp_overlap 4115882 TTGTGTAAAGCAAAA CTGCATC GTAGATT GATGCAG CTCATTAAATCAGCA Dhaf_3880 4116641 - 4115922 - | transcriptional regulator, GntR family TERM 5726 4116077 - 4116102 + g 81 -6.1 -5.00616 | opp_overlap 4116056 TGATCTCTTCATCAG GGGGCTGAGCA TAAA TGGTCAGTTCC TTTTTTAGAGAAAAA Dhaf_3881 4117267 - 4116617 - | cobalamin B12-binding domain protein Dhaf_3882 4118091 - 4117393 - | Protein of unknown function DUF1638 Dhaf_3883 4118911 - 4118105 - | dihydropteroate synthase DHPS TERM 5727 4118647 - 4118632 - G 76 -11.8 -2.76456 | opp_overlap 4118631, overlap 4118629 AAACGGAGTTAATCA GCCCGG GACG CCGGGC ATGCTTGAAGACTTC TERM 5728 4118920 - 4118940 + r 74 -10.5 -2.60496 | opp_overlap 4118937, overlap 4118919 4118916 4118933 4118937 TGATCATAGCTTAGT CTCCTTTTG TTA CAAAAGGGG CTGTTTAGCCACAGC TERM 5729 4118933 - 4118962 + r 100 -10.8 -5.8096 | opp_overlap 4118937, overlap 4118920 4118919 4118916 4118937 GTCTCCTTTTGTTAC AAAAGGGGCTGT TTAGCC ACAGCCCCTTTG TTTTTGTTTTTTATA TERM 5730 4118958 - 4118937 - R 100 -11.6 -4.36914 | opp_overlap 4118920 4118919 4118916 4118937 4118933 CCTTTTGTTACAAAA GGGGCTGT TTAGCC ACAGCCCC TTTGTTTTTGTTTTT TERM 5731 4118937 - 4118958 + r 100 -11.6 -5.21459 | opp_overlap 4118937, overlap 4118920 4118919 4118916 4118933 CCTTTTGTTACAAAA GGGGCTGT TTAGCC ACAGCCCC TTTGTTTTTGTTTTT Dhaf_3884 4119129 - 4118986 - | hypothetical protein Dhaf_3885 4120288 - 4119143 - | hypothetical protein Dhaf_3886 4120928 - 4120281 - | cobalamin B12-binding domain protein Dhaf_3887 4121969 - 4121157 - | cobalt transport protein Dhaf_3888 4123741 - 4121960 - | ABC transporter related TERM 5732 4122142 - 4122126 - G 72 -5.7 -4.3129 | overlap 4122127 GATTCATCAGCAAAA GCCTCCC AGG GAGGGGC ATCGATCATCACCTG TERM 5733 4122243 - 4122270 + g 83 -9.2 -4.36914 | overlap 4122244 ATGGTGGTCCCCTTT CTATGGAGCTGC TGAA GCAGCTTCATAA TTTTCTCCACCCCCA TERM 5734 4122244 - 4122269 + g 84 -12.7 -3.21934 | overlap 4122243 TGGTGGTCCCCTTTC TATGGAGCTGC TGAA GCAGCTTCATA ATTTTCTCCACCCCC Dhaf_3889 4124266 - 4123754 - | hypothetical protein TERM 5735 4124129 - 4124112 - G 80 -4.8 -5.03747 | overlap 4124124 4124125 AAAGCGCTGAAAAAA CCCGGA GCAGAA TCCAGG GCCACTGTCCCCAGC TERM 5736 4124210 - 4124192 - G 83 -9.6 -4.25681 | overlap 4124183 ACTCAAGGCAAGAAA GACTGCCA TGA TGGCAATC CGTCGGATATTCTGA Dhaf_3890 4125126 - 4124353 - | hypothetical protein TERM 5737 4124731 - 4124713 - G 75 -5.9 -4.53303 | GAGCCCCAGACAAAA CAGGCTG TTGCC CGGCCTG GCTCTGCCAATGCGA TERM 5738 4125220 - 4125170 - R 100 -8.4 -5.69262 | opp_overlap 4125216, overlap 4125210 4125211 4125214 TTATAAAAATAAAAA GTCCATAGCCACCTCGCTTCTCCT TGC AGACAAAGCAAAATGACCATGAAC TTTACCAAACTTCAT TERM 5739 4125507 - 4125565 + r 74 -9.7 -3.14991 | gap 1, opp_overlap 4125510 4125514, overlap 4125508 4125510 GGTGTTCTATCTTCT -AAACCAATCAGGCCGGAGGATTGTTCC TATT GAAACAATCCTCCGGCCTGATCCATCTG CTTTTGAAATTTATA TERM 5740 4125508 - 4125563 + r 100 -14.8 -3.1236 | opp_overlap 4125510 4125514, overlap 4125507 4125510 GTGTTCTATCTTCTA AACCAATCAGGCCGGAGGATTGTTCC TATT GAAACAATCCTCCGGCCTGATCCATC TGCTTTTGAAATTTA TERM 5741 4125561 - 4125510 - R 100 -24 -3.55444 | opp_overlap 4125508 4125507 4125510, overlap 4125514 GTTCTATCTTCTAAA CCAATCAGGCCGGAGGATTGTTCC TATT GAAACAATCCTCCGGCCTGATCCA TCTGCTTTTGAAATT TERM 5742 4125510 - 4125561 + r 100 -17.4 -3.10939 | opp_overlap 4125510 4125514, overlap 4125508 4125507 GTTCTATCTTCTAAA CCAATCAGGCCGGAGGATTGTTCC TATT GAAACAATCCTCCGGCCTGATCCA TCTGCTTTTGAAATT TERM 5743 4125557 - 4125514 - R 100 -29.2 -3.51708 | opp_overlap 4125510 4125508 4125507, overlap 4125510 TATCTTCTAAACCAA TCAGGCCGGAGGATTGTTCC TATT GAAACAATCCTCCGGCCTGA TCCATCTGCTTTTGA Dhaf_3891 4126773 - 4125583 - | Methionine adenosyltransferase Dhaf_3892 4127981 - 4126779 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase TERM 5744 4126909 - 4126883 - G 71 -7.2 -4.09685 | TCCCATCCGGGAAAA GCAGGCTCACGA TAT TCGTAGGGCTGC CAAATCCCGCTCCGG TERM 5745 4127024 - 4127034 + g 87 -6.8 -5.12172 | CAGCGGCGAACCCCA CCAG AAA CTGG TTTTCTTTCTTCCTG Dhaf_3893 4128187 - 4127981 - | DNA-directed RNA polymerase, omega subunit Dhaf_3894 4128792 - 4128190 - | Guanylate kinase TERM 5746 4128333 - 4128348 + g 78 -6 -4.68424 | overlap 4128332 ATTCCAGTTCCCGAG CGGCAG TCTG CAGCCG TTTTTGAATCACTTC Dhaf_3895 4129081 - 4128806 - | protein of unknown function DUF370 Dhaf_3896 4129966 - 4129097 - | domain of unknown function DUF1732 TERM 5747 4129357 - 4129344 - G 83 -3.8 -5.40072 | CTGTCTGCAAAAAAA GCCA CTTCAT TGGC CAGGCGAGCTTCATC TERM 5748 4130349 - 4130405 + r 73 -5.4 -4.63044 | gap 1, opp_overlap 4130357 4130358 4130359, overlap 4130351 4130359 4130360 CTTTGCCAATCTACC TATAAAAAGTTCGTGCCAAATTCCCAA GCGC TTGGGAATTTGGCAC-AGGTTTCAATC TTTCTTTCTCTCCAT TERM 5749 4130351 - 4130403 + r 74 -8 -3.91983 | gap 1, opp_overlap 4130357 4130358 4130359, overlap 4130349 4130359 4130360 TTGCCAATCTACCTA TAAAAAGTTCGTGCCAAATTCCCAA GCGC TTGGGAATTTGGCAC-AGGTTTCAA TCTTTCTTTCTCTCC TERM 5750 4130398 - 4130357 - R 100 -9.5 -4.88067 | opp_overlap 4130351 4130349 4130359 4130360, overlap 4130358 4130359 ATCTACCTATAAAAA GTTCGTGCCAAATTCCCAA GCGC TTGGGAATTTGGCACAGGT TTCAATCTTTCTTTC TERM 5751 4130397 - 4130358 - R 100 -13 -3.52117 | opp_overlap 4130351 4130349 4130359 4130360, overlap 4130357 4130359 TCTACCTATAAAAAG TTCGTGCCAAATTCCCAA GCGC TTGGGAATTTGGCACAGG TTTCAATCTTTCTTT TERM 5752 4130396 - 4130359 - R 100 -16.5 -2.70788 | opp_overlap 4130351 4130349 4130359 4130360, overlap 4130358 4130357 CTACCTATAAAAAGT TCGTGCCAAATTCCCAA GCGC TTGGGAATTTGGCACAG GTTTCAATCTTTCTT TERM 5753 4130359 - 4130397 + r 100 -16.3 -3.85835 | gap 1, opp_overlap 4130359 4130358 4130357, overlap 4130351 4130349 4130360 CTACCTATAAAAAGT TC-GTGCCAAATTCCCAA GCGC TTGGGAATTTGGCACAGG TTTCAATCTTTCTTT TERM 5754 4130360 - 4130396 + r 100 -17.6 -2.89874 | gap 1, opp_overlap 4130359 4130358 4130357, overlap 4130359 4130351 4130349 TACCTATAAAAAGTT C-GTGCCAAATTCCCAA GCGC TTGGGAATTTGGCACAG GTTTCAATCTTTCTT Dhaf_3897 4134431 - 4130400 - | CoA-substrate-specific enzyme activase TERM 5755 4130819 - 4130835 + g 70 -2.2 -4.88388 | overlap 4130820 CACTCAGGGGCATCG TGGCAA TCTTT TTGCCC TTTTTCTCAACTTCT TERM 5756 4131080 - 4131106 + g 72 -10.1 -3.05384 | opp_overlap 4131076 TTTGGCGAAGATCTT CTCTGGCTGCC GCGGG GGCGGCCAGAA TTAAATCCCCGGCCA TERM 5757 4132495 - 4132513 + g 71 -3 -4.90079 | opp_overlap 4132496, overlap 4132496 4132500 TTATGGACCACCAAA ACATAGGG AAC CCCGATGG TTTTCTTCTTCGGAT TERM 5758 4132512 - 4132496 - G 74 -6.5 -4.3129 | opp_overlap 4132495 4132496 4132500 TATGGACCACCAAAA CATAGGG AAC CCCGATG GTTTTCTTCTTCGGA Dhaf_3898 4134807 - 4134466 - | Cupin 2 conserved barrel domain protein Dhaf_3899 4135151 - 4134810 - | cyclic nucleotide-binding protein Dhaf_3900 4135859 - 4135173 - | ABC transporter related Dhaf_3901 4136610 - 4135843 - | binding-protein-dependent transport systems inner membrane component Dhaf_3902 4137656 - 4136622 - | hypothetical protein TERM 5759 4137709 - 4137692 - H 72 -9.9 -2.80035 | overlap 4137683 4137689 4137687 TATATACTAACACCA GGTTAGC TCAA GCTAACC CAAAGTGGTAAAATG TERM 5760 4137746 - 4137723 - H 85 -9.6 -4.17089 | opp_overlap 4137722 CCCAAAGTGGTAAAA TGCGGTTAGC AAAA GCTAACCTCA CTATAGTTTTAGCAG TERM 5761 4137838 - 4137818 - g 80 -2.6 -5.52384 | opp_overlap 4137826 GTCCTATGAAAAAAA TTGATTCC GTATT GCAATCAA TGCCTCTCTTTAAAA TERM 5762 4137868 - 4137855 - g 73 -5.3 -4.56597 | GCCTCTCTTTAAAAA TATCC AACC GGATA AATATACTAATGTTC TERM 5763 4138477 - 4138449 - g 88 -8.4 -4.84359 | gap 1, opp_overlap 4138449, overlap 4138473 CGACTTTTACAAAAA TGAGATCA-TTCT TTTA AGAAATGATCTCA TTTCCTGAGAGGGTA TERM 5764 4138449 - 4138477 + G 71 -8.4 -3.72893 | gap 1, opp_overlap 4138449 4138473 CGACTTTTACAAAAA TGAGATCA-TTCT TTTA AGAAATGATCTCA TTTCCTGAGAGGGTA Dhaf_3903 4137808 - 4138485 + | transcriptional regulator, Crp/Fnr family TERM 5765 4138750 - 4138728 - f 74 -4.8 -4.77719 | opp_overlap 4138743, overlap 4138743 4138744 CAAAATCCAATAAAA CCATAGTGTC ATA AACGCCATGG AGCTGTGCAAACAGC TERM 5766 4140220 - 4140256 + F 100 -8.9 -4.6856 | opp_overlap 4140222 TAGCACATTGTATTA TATAGCTTTGCCAGTAT TCT GTATTGGGAGAGCTATA TTTTTGCCATCTTTC TERM 5767 4140330 - 4140364 + F 75 -5.7 -4.63218 | opp_overlap 4140330 4140332 AGGATATGGATATCA GATGGACTGCCAC ACCGCAATG GAAGCAGTCCATC TTTTGTTAGGGAAAA TERM 5768 4141575 - 4141563 - g 73 -7.7 -4.09685 | opp_overlap 4141563 4141562 TGGGATTTCTTAAAA CGATG TAC CATCG GTTTTGATGGGGACA TERM 5769 4141763 - 4141739 - g 73 -7.9 -3.97368 | CCGGCAATTCACAAA GACCAAAAAAG TAG CCTTTCTGGCC GGGTGGGCCAGTGCC Dhaf_3905 4140636 - 4143215 + | molybdopterin oxidoreductase Dhaf_3906 4143233 - 4143811 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 5770 4143891 - 4143845 - T 100 -18.3 -3.02144 | gap 1, opp_overlap 4143846 4143848, overlap 4143853 GTATCCCCGGCAATA TGC-CAAGATGGACTGCCTCAT CCCC ATGAAGCAGTCCATCTTGTGCT TTAATTCAATACAAA TERM 5771 4143846 - 4143890 + T 100 -19.6 -3.93288 | gap 1, opp_overlap 4143845 4143853, overlap 4143848 TATCCCCGGCAATAT GC-CAAGATGGACTGCCTCAT CCCC ATGAAGCAGTCCATCTTGTGC TTTAATTCAATACAA TERM 5772 4143848 - 4143887 + T 100 -21 -3.02881 | opp_overlap 4143845 4143853, overlap 4143846 TCCCCGGCAATATGC CAAGATGGACTGCCTCAT CCCC ATGAAGCAGTCCATCTTG TGCTTTAATTCAATA TERM 5773 4143882 - 4143853 - T 100 -15.9 -3.0976 | opp_overlap 4143848 4143846, overlap 4143845 GGCAATATGCCAAGA TGGACTGCCTCAT CCCC ATGAAGCAGTCCA TCTTGTGCTTTAATT Dhaf_3907 4144858 - 4144007 - | Diaminopimelate epimerase TERM 5774 4144876 - 4144894 + r 71 -2.4 -5.14563 | overlap 4144878 CTAACTTCAACTCCT TACCCA ATGATCC TGGGTG TTTTTTCCTAGGGAA Dhaf_3908 4145099 - 4144902 - | hypothetical protein Dhaf_3909 4145561 - 4145301 - | hypothetical protein Dhaf_3910 4146694 - 4145564 - | Cysteine desulfurase TERM 5775 4146526 - 4146549 + g 78 -12.4 -2.68532 | opp_overlap 4146531, overlap 4146531 GCTCAGCGGAGCCGA CCAAAGCGGC GATG GCCGCTCTGG TCCTGTAAATTTCCC TERM 5776 4146544 - 4146531 - G 76 -9.5 -3.74693 | opp_overlap 4146526 4146531 GCGGAGCCGACCAAA GCGGC GATG GCCGC TCTGGTCCTGTAAAT Dhaf_3911 4147495 - 4146701 - | CoA-substrate-specific enzyme activase TERM 5777 4147108 - 4147088 - G 71 -10.5 -2.79796 | opp_overlap 4147088 CTCCAGGGTATCACA GGCCATTTT TAA AAAACGGCC TGTTCCGGCGGCGCA Dhaf_3912 4148646 - 4147492 - | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 5778 4148109 - 4148128 + g 93 -8.6 -5.17576 | overlap 4148094 4148097 GCTCGTAAAATTCTT TGAGGAGC TTAC GTTCCTCA TTTTTTACCTTGATG TERM 5779 4148556 - 4148569 + g 71 -3.8 -4.66609 | CCGCCACTTTCTTTC CCTG CTCTTT CAGG TTTTTAACTGCAATG TERM 5780 4148887 - 4148925 + r 78 -5.3 -5.04082 | gap 1, opp_overlap 4148885 4148883 4148889, overlap 4148888 4148889 CCCCCGCAAAATATT AAGTCCGCAAACCCT-TA TAAT TACAGGGCTTGCGGACCA TTTTCTTCTTCTTTG TERM 5781 4148888 - 4148924 + r 75 -8.8 -3.60009 | gap 1, opp_overlap 4148885 4148883 4148889, overlap 4148887 4148889 CCCCGCAAAATATTA AGTCCGCAAACCCT-TA TAAT TACAGGGCTTGCGGACC ATTTTCTTCTTCTTT TERM 5782 4148923 - 4148889 - R 100 -14.5 -3.53779 | gap 1, opp_overlap 4148888 4148887 4148889, overlap 4148885 4148883 CCCGCAAAATATTAA GTCCGCAAACCCT-TA TAAT TACAGGGCTTGCGGAC CATTTTCTTCTTCTT TERM 5783 4148889 - 4148923 + r 89 -12.3 -2.73565 | gap 1, opp_overlap 4148889 4148885 4148883, overlap 4148888 4148887 CCCGCAAAATATTAA GTCCGCAAACCCT-TA TAAT TACAGGGCTTGCGGAC CATTTTCTTCTTCTT TERM 5784 4148970 - 4148956 - R 82 -5.6 -5.07652 | overlap 4148957 CTTCCGAAAACAAAA TCCGGA TCC TCCGGC GGTTCCAGCCATCGA TERM 5785 4148969 - 4148957 - R 75 -9.1 -3.63868 | overlap 4148956 TTCCGAAAACAAAAT CCGGA TCC TCCGG CGGTTCCAGCCATCG Dhaf_3913 4149583 - 4149011 - | protein of unknown function DUF820 TERM 5786 4149546 - 4149557 + g 77 -4.4 -5.11112 | CAGGTAAGATAGTCG GCAT ACGT ATGC TTTTTATTCGCCTTT Dhaf_3914 4149906 - 4150151 + | transcriptional regulator, XRE family TERM 5787 4150336 - 4150283 - T 91 -3.5 -5.75342 | gap 3, opp_overlap 4150286 4150290, overlap 4150286 4150290 GTTGTTGAAAAAAAA TAATAAACGGTGCTC-AAAAC--TGG TCAAG CCAATGTTTTTGAGCACCGTTTGTTC TGTTATCATGTTAGT TERM 5788 4150286 - 4150333 + T 72 -8.1 -3.79482 | gap 3, opp_overlap 4150283 4150286 4150290, overlap 4150290 GTTGAAAAAAAATAA TAAACGGTGCTC-AAAAC--TGGT CAA GCCAATGTTTTTGAGCACCGTTTG TTCTGTTATCATGTT TERM 5789 4150333 - 4150286 - T 78 -5.2 -4.96028 | gap 3, opp_overlap 4150286 4150290, overlap 4150283 4150290 GTTGAAAAAAAATAA TAAACGGTGCTC-AAAAC--TGG TCAAG CCAATGTTTTTGAGCACCGTTTG TTCTGTTATCATGTT TERM 5790 4150329 - 4150290 - T 82 -6 -4.92655 | gap 3, opp_overlap 4150286 4150290, overlap 4150286 4150283 AAAAAAAATAATAAA CGGTGCTC-AAAAC--TGG TCAAG CCAATGTTTTTGAGCACCG TTTGTTCTGTTATCA TERM 5791 4150290 - 4150329 + T 76 -6.7 -4.49353 | gap 3, opp_overlap 4150290 4150286 4150283, overlap 4150286 AAAAAAAATAATAAA CGGTGCTC-AAAAC--TGGT CAA GCCAATGTTTTTGAGCACCG TTTGTTCTGTTATCA Dhaf_3915 4153140 - 4150399 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 5792 4154266 - 4154244 - g 82 -10.6 -3.86202 | TTTTATCAGAGCAAA GCCTCCAG CAACACC CTGGAGGC CAAACGGGGTTCCCT TERM 5793 4154345 - 4154328 - g 89 -3.4 -5.55769 | overlap 4154344 CTGCACAAGAAAAAA GGCATC TATGAG GATACC CTGGCCACGGCCGCC TERM 5794 4154589 - 4154569 - g 77 -3.9 -5.1101 | CCACTATTCAAAAAA CAACGCCCC TTA AAGACGCTG TGGAGGAGGAAATCG Dhaf_3916 4153335 - 4155293 + | Fibronectin-binding A domain protein TERM 5795 4155349 - 4155319 - f 100 -10.4 -4.46212 | opp_overlap 4155321 4155324, overlap 4155321 4155324 TGGCCTACTATAAAA GATAACGCCGGAGC AGA GTTCCGGCGTCATT TTGCTTTGCTTGCCG TERM 5796 4155347 - 4155321 - f 100 -13 -3.84183 | opp_overlap 4155321 4155324, overlap 4155319 4155324 GCCTACTATAAAAGA TAACGCCGGAGC AGA GTTCCGGCGTCA TTTTGCTTTGCTTGC TERM 5797 4155321 - 4155347 + F 100 -13 -4.62054 | opp_overlap 4155321 4155319 4155324, overlap 4155324 GCCTACTATAAAAGA TAACGCCGGAGC AGA GTTCCGGCGTCA TTTTGCTTTGCTTGC TERM 5798 4155324 - 4155344 + F 100 -14.7 -3.22917 | opp_overlap 4155321 4155319 4155324, overlap 4155321 TACTATAAAAGATAA CGCCGGAGC AGA GTTCCGGCG TCATTTTGCTTTGCT TERM 5799 4155344 - 4155324 - f 100 -12.5 -4.04187 | opp_overlap 4155324 4155321, overlap 4155321 4155319 TACTATAAAAGATAA CGCCGGAGC AGA GTTCCGGCG TCATTTTGCTTTGCT Dhaf_3917 4155384 - 4155698 + | transcriptional regulator, XRE family TERM 5800 4155749 - 4155702 - T 84 -9.9 -3.79396 | opp_overlap 4155704 4155705 4155709, overlap 4155703 4155709 AATAATGACTAAGAA CGCGAAAGCCTGCAGAATCCA AAAGTA TGGAGCCTGCAGGCTTTCATT TCTCATCATTTCCAT TERM 5801 4155748 - 4155703 - T 93 -13.4 -2.86553 | opp_overlap 4155704 4155705 4155709, overlap 4155702 4155709 ATAATGACTAAGAAC GCGAAAGCCTGCAGAATCCA AAAGTA TGGAGCCTGCAGGCTTTCAT TTCTCATCATTTCCA TERM 5802 4155704 - 4155747 + T 100 -12.5 -4.04209 | opp_overlap 4155703 4155702 4155709, overlap 4155705 4155709 TAATGACTAAGAACG CGAAAGCCTGCAGAATCCA AAAGTA TGGAGCCTGCAGGCTTTCA TTTCTCATCATTTCC TERM 5803 4155705 - 4155746 + T 100 -16 -3.01802 | opp_overlap 4155703 4155702 4155709, overlap 4155704 4155709 AATGACTAAGAACGC GAAAGCCTGCAGAATCCA AAAGTA TGGAGCCTGCAGGCTTTC ATTTCTCATCATTTC TERM 5804 4155709 - 4155742 + T 93 -11 -4.16182 | opp_overlap 4155709 4155703 4155702, overlap 4155705 4155704 ACTAAGAACGCGAAA GCCTGCAGAATCCA AAAGTA TGGAGCCTGCAGGC TTTCATTTCTCATCA TERM 5805 4155742 - 4155709 - T 100 -13.2 -3.72453 | opp_overlap 4155705 4155704 4155709, overlap 4155703 4155702 ACTAAGAACGCGAAA GCCTGCAGAATCCA AAAGTA TGGAGCCTGCAGGC TTTCATTTCTCATCA Dhaf_3918 4156402 - 4155815 - | hypothetical protein TERM 5806 4157377 - 4157354 - g 93 -8.2 -5.10064 | overlap 4157346 CCGAACAGACAAAAA TGCCTTGC CCTGGCTC GCAAGGCA CTGCGCATCTCACCC Dhaf_3919 4156538 - 4158025 + | Tetratricopeptide TPR_2 repeat protein TERM 5807 4158167 - 4158125 - T 95 -14.3 -2.62263 | opp_overlap 4158130, overlap 4158130 ATGCGTGGCACATCA CAAAAGCCTGCAGAATCCA AAACA TGGAGCCTGCAGGCTTTTT CCATTCATTTTACTT TERM 5808 4158162 - 4158130 - T 100 -14.2 -4.50976 | opp_overlap 4158130, overlap 4158125 TGGCACATCACAAAA GCCTGCAGAATCCA AAACA TGGAGCCTGCAGGC TTTTTCCATTCATTT TERM 5809 4158130 - 4158162 + T 100 -12 -4.788 | opp_overlap 4158125 4158130 TGGCACATCACAAAA GCCTGCAGAATCCA AAACA TGGAGCCTGCAGGC TTTTTCCATTCATTT Dhaf_3920 4158899 - 4158177 - | 5-amino-6-(5-phosphoribosylamino)uracil reductase Dhaf_3921 4160166 - 4158997 - | iron-containing alcohol dehydrogenase TERM 5810 4159754 - 4159799 + g 100 -13.2 -4.07687 | opp_overlap 4159756 4159761 GCCGTGGTCGTAATG CAGACCAGGGGCAGGGGCTC ATGGCG GAGGGCCTGCCCCTTGCCTG TTTTGCCCCCCACAT TERM 5811 4159797 - 4159756 - G 78 -12.2 -2.52464 | opp_overlap 4159754, overlap 4159761 CGTGGTCGTAATGCA GACCAGGGGCAGGGGCTC ATGGCG GAGGGCCTGCCCCTTGCC TGTTTTGCCCCCCAC TERM 5812 4159792 - 4159761 - G 75 -11.5 -2.66733 | opp_overlap 4159754, overlap 4159756 TCGTAATGCAGACCA GGGGCAGGGGCTC ATGGCG GAGGGCCTGCCCC TTGCCTGTTTTGCCC Dhaf_3922 4160575 - 4160159 - | Cupin 2 conserved barrel domain protein Dhaf_3923 4160704 - 4161174 + | transcriptional regulator, MerR family Dhaf_3924 4161485 - 4161375 - | hypothetical protein Dhaf_3925 4162201 - 4161491 - | hypothetical protein Dhaf_3926 4162842 - 4162207 - | hypothetical protein TERM 5813 4162589 - 4162607 + g 70 -2.3 -4.97957 | opp_overlap 4162565 CGCCCGGTATGGCAG GTGGTGC ACATG GCAACGC TTTTCTTCTTATCTA TERM 5814 4162818 - 4162828 + g 76 -2.4 -5.31855 | AAATAATTCCCTTAA ACGC CCA GCGC TTTTTCTTGTTCATC TERM 5815 4163057 - 4163040 - R 100 -10.5 -4.25104 | opp_overlap 4163039 4163027 TGCCGTGCACGAAAA GCCGCCC CTAA GGACGGC CTCTGGTCATGGTTT TERM 5816 4163147 - 4163122 - R 79 -11.2 -3.08706 | AAGGACAGGTCAAGA CTGCCGGCAA CAGATT TTACCGGCAG TCCGACAGATAGGAC Dhaf_3927 4163454 - 4163215 - | hypothetical protein Dhaf_3928 4163729 - 4163505 - | protein of unknown function DUF1659 TERM 5817 4163903 - 4163889 - H 86 -7 -4.99043 | opp_overlap 4163891, overlap 4163891 GCGCGATAAAGAAAA CCCGGC TTC GCCGTG CCTTAAACGCATACT TERM 5818 4164041 - 4164092 + H 100 -26.2 -4.84359 | opp_overlap 4164044, overlap 4164042 4164044 CGGTTCTTTAATGCC AAAGGACCTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAGGTCCTGC TTTTTCTGCCAGTCA TERM 5819 4164042 - 4164091 + H 100 -29.7 -3.50133 | opp_overlap 4164044, overlap 4164041 4164044 GGTTCTTTAATGCCA AAGGACCTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAGGTCCTG CTTTTTCTGCCAGTC TERM 5820 4164089 - 4164044 - H 100 -32.3 -3.66178 | opp_overlap 4164042 4164041 4164044 TTCTTTAATGCCAAA GGACCTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAGGTCC TGCTTTTTCTGCCAG TERM 5821 4164044 - 4164089 + H 100 -32.3 -3.31915 | opp_overlap 4164044, overlap 4164042 4164041 TTCTTTAATGCCAAA GGACCTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAGGTCC TGCTTTTTCTGCCAG Dhaf_3929 4164167 - 4165009 + | hypothetical protein TERM 5822 4164994 - 4165028 + T 73 -2.6 -5.10029 | opp_overlap 4164999 4165003, overlap 4164996 4165010 CAAAGCCATGCGGGG GAGAATGCAGGGCTGA GGT TCAGCCCAGTGAGCCC TTTTTTCACGTTGGT TERM 5823 4165019 - 4165003 - T 88 -12.3 -2.59431 | opp_overlap 4164996 4164994 4165010, overlap 4164999 GCGGGGGAGAATGCA GGGCTGA GGT TCAGCCC AGTGAGCCCTTTTTT TERM 5824 4165315 - 4165360 + T 100 -30.9 -3.73953 | opp_overlap 4165315 TTTTTCATCAAATAA GAGTCTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAGACTC TTTCCTCCGCATAAT TERM 5825 4165360 - 4165315 - T 100 -30.9 -4.00042 | opp_overlap 4165315 TTTTTCATCAAATAA GAGTCTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAGACTC TTTCCTCCGCATAAT TERM 5826 4165892 - 4165919 + T 81 -9.2 -3.85909 | AAGCTAACAACTCGG TGTGCTTTTGGG ATTG CCCAAAAACGCA TTTGCGTTTCAATCC Dhaf_3930 4166428 - 4166165 - | CRISPR-associated protein Cas2 Dhaf_3931 4167524 - 4166529 - | CRISPR-associated protein Cas1 Dhaf_3932 4168102 - 4167593 - | CRISPR-associated protein Cas4 TERM 5827 4167923 - 4167938 + g 86 -7.6 -4.87665 | overlap 4167913 CAGTCGGATATTGCC CAAGGA GATC TCCTTG TTTTTATCCCTGGCA Dhaf_3933 4170542 - 4168125 - | CRISPR-associated helicase Cas3 TERM 5828 4168266 - 4168252 - G 73 -3.4 -4.90266 | overlap 4168253 CCCACCAAGGAAAAA GCCAGC TTA GCCGGA ACATTGACCACATAA TERM 5829 4170281 - 4170269 - G 80 -4.1 -5.32699 | overlap 4170274 CCAAATACGAAAAAA GAAAG GCG CCTTC AGGAGCATGGTTCGG TERM 5830 4170819 - 4170802 - R 100 -9.1 -4.93696 | opp_overlap 4170802 TCCAAATAGGAAAAA GCACCCG CAAA CGAGTGC TCGTATGTAATACTT Dhaf_3934 4172553 - 4171382 - | transposase IS3/IS911 family protein TERM 5831 4172224 - 4172242 + g 80 -4.4 -5.20216 | overlap 4172222 4172225 ACATCTTCTCAACCG GGCAGCTG GAG CTGCTGGC TTTTTTAATCATCTG Dhaf_3936 4172805 - 4172575 - | hypothetical protein Dhaf_3937 4175024 - 4174329 - | CRISPR-associated protein Cas5 Dhaf_3938 4176018 - 4175068 - | CRISPR-associated protein, CT1132 family Dhaf_3939 4178068 - 4176011 - | hypothetical protein TERM 5832 4177407 - 4177419 + g 75 -7.7 -4.17316 | opp_overlap 4177407 4177406 GCAGCCTCGTAAAAC TTGGC CCG GCCAA TTCTTTTCAGGACCT TERM 5833 4177898 - 4177916 + g 85 -13.2 -2.85216 | opp_overlap 4177910, overlap 4177895 4177900 CCTGTCCCCTACCTC CATCGGCT GAA AGCCGATG TCCTTCTCCGTGATC TERM 5834 4178169 - 4178134 - R 100 -18.6 -3.34988 | opp_overlap 4178139, overlap 4178139 CTACTGAGAAATACA GAAAACAAGGACAGGT TTTT ACCTATCCTTGTTTTC ATTCGACTAAATAAT TERM 5835 4178164 - 4178139 - R 100 -12.7 -4.76423 | opp_overlap 4178139, overlap 4178134 GAGAAATACAGAAAA CAAGGACAGGT TTTT ACCTATCCTTG TTTTCATTCGACTAA TERM 5836 4178139 - 4178164 + r 100 -10.5 -4.42238 | opp_overlap 4178139 4178134 GAGAAATACAGAAAA CAAGGACAGGT TTTT ACCTATCCTTG TTTTCATTCGACTAA Dhaf_3940 4178570 - 4178226 - | protein of unknown function DUF86 Dhaf_3941 4178859 - 4178560 - | DNA polymerase beta domain protein region TERM 5837 4178969 - 4179014 + r 100 -22.1 -4.15632 | opp_overlap 4178971, overlap 4178970 AATCCCTTAATATAG AATTTCCCGGCAATGGTGTCA CACC TGACACCATTGCCGGGAAAAA TTTATCTGTGATGCT TERM 5838 4178970 - 4179013 + r 100 -25.6 -3.08656 | opp_overlap 4178971, overlap 4178969 ATCCCTTAATATAGA ATTTCCCGGCAATGGTGTCA CACC TGACACCATTGCCGGGAAAA ATTTATCTGTGATGC TERM 5839 4179012 - 4178971 - R 100 -29.1 -3.68024 | opp_overlap 4178970 4178969 TCCCTTAATATAGAA TTTCCCGGCAATGGTGTCA CACC TGACACCATTGCCGGGAAA AATTTATCTGTGATG TERM 5840 4179441 - 4179454 + r 75 -5.3 -4.84311 | opp_overlap 4179441 ATTCCTCATAGGTAA GCTAA CAAC TTAGC TTTTGTTATGTACCC TERM 5841 4183696 - 4183653 - R 100 -30 -4.25283 | opp_overlap 4183666 ACTTTGCCAGGAAAA GGTCTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAGACC CAACGGCGATGTTTA TERM 5842 4183666 - 4183683 + r 71 -8.5 -3.53012 | opp_overlap 4183653 AAGGTCTGTCCGAAA TAGGTAC GCGC GTACCTA TTTCGGACAGACCCA Dhaf_3942 4184452 - 4183712 - | CRISPR-associated protein Cas6 TERM 5843 4183906 - 4183934 + g 71 -8.8 -3.6761 | overlap 4183904 TTTCCACTTCCCCTT CCGGTCCTTCTG ATCCA TAGAGGGCCCGG TATTTCTTGCGCAGA Dhaf_3943 4185281 - 4184736 - | GCN5-related N-acetyltransferase TERM 5844 4185487 - 4185444 - R 100 -11.8 -4.03234 | opp_overlap 4185458, overlap 4185447 CCTTTTGGAGAGAAA CCATGTCCCCAAACACGACA ACGT TGTCGCATTTGGGGACAAAC CCGGTTTCCGGCATT TERM 5845 4185484 - 4185447 - R 100 -20.1 -3.06418 | opp_overlap 4185458, overlap 4185444 TTTGGAGAGAAACCA TGTCCCCAAACACGACA ACGT TGTCGCATTTGGGGACA AACCCGGTTTCCGGC Dhaf_3944 4185694 - 4185527 - | hypothetical protein TERM 5846 4185718 - 4185760 + r 73 -8.5 -3.72695 | gap 3, opp_overlap 4185721 TACCCCCTATTTCAA GCAG-CGGCAAGGCTCCGGG CCCTGA CCCGGT-CCT-GCCGTCTGC TTTGATAGGGGAAAT TERM 5847 4185817 - 4185782 - R 86 -6.9 -4.99134 | opp_overlap 4185811 AGGGGAAATTAAAAA GCACATATGCGAGGT TTTTTT ACCCTACACATGTGC CATGCTTCGTTATCT TERM 5848 4185919 - 4185891 - R 71 -4.6 -4.66537 | gap 1, overlap 4185892 4185893 GCTGTGAACAGAAAA GC-GGTCCGCATA ACCG TATGCGAACAAGC CCTTTCAGCTGCCTG TERM 5849 4186121 - 4186163 + r 70 -2.9 -4.98531 | gap 3, overlap 4186101 4186120 4186119 GGTGCTCTCTCACCT G-C-TCGTG-CCTGAGAGTG CGCTAA CACTTTCAGGTCACGGCGAC TTTTTAATTTCCACC Dhaf_3945 4187129 - 4186629 - | histidine kinase TERM 5850 4186743 - 4186769 + g 77 -2.9 -5.23316 | GGCCAGCCCCAGCCC CAGCCCGGT GGTATGAAA GCCGGCCTG TTTTTTGGTATAATA Dhaf_3946 4188258 - 4187362 - | histidine kinase TERM 5851 4187916 - 4187900 - G 71 -9.3 -3.54051 | opp_overlap 4187901, overlap 4187901 ATAAAGGCCAGATAA CGCGCCG CGG CGGCGCT TTTTTCCTCCTCCTC TERM 5852 4187901 - 4187915 + g 100 -12.8 -5.19212 | opp_overlap 4187900 4187901 TAAAGGCCAGATAAC GCGCCG CGG CGGCGC TTTTTTCCTCCTCCT TERM 5853 4187915 - 4187901 - G 81 -12.8 -2.71708 | opp_overlap 4187901, overlap 4187900 TAAAGGCCAGATAAC GCGCCG CGG CGGCGC TTTTTTCCTCCTCCT TERM 5854 4188049 - 4188031 - G 76 -11.6 -2.87132 | GTCGCCGTTCAGATA GTGCCGGC GCT GCCGGCGC AGCAAGCGCAGCTGG Dhaf_3947 4189107 - 4188274 - | hypothetical protein Dhaf_3948 4190013 - 4189129 - | ABC transporter related TERM 5855 4189220 - 4189173 - G 95 -14.8 -3.64703 | opp_overlap 4189168 4189174 4189176 4189177, overlap 4189176 TTTCCTGCACGGAAA TCACCTCACAGCCCTCCCGGGC CAGG GCCAGGGTGAGCTGTGAGATAT TGACTTTAGCGAAGA TERM 5856 4189174 - 4189219 + g 82 -11.7 -3.27525 | opp_overlap 4189173 4189176, overlap 4189168 4189176 4189177 TTCCTGCACGGAAAT CACCTCACAGCCCTCCCGGGC CAGG GCCAGGGTGAGCTGTGAGATA TTGACTTTAGCGAAG TERM 5857 4189176 - 4189217 + g 90 -14.3 -3.20349 | opp_overlap 4189176 4189173, overlap 4189174 4189168 4189177 CCTGCACGGAAATCA CCTCACAGCCCTCCCGGGC CAGG GCCAGGGTGAGCTGTGAGA TATTGACTTTAGCGA TERM 5858 4189217 - 4189176 - G 100 -18.7 -2.94144 | opp_overlap 4189174 4189168 4189176 4189177, overlap 4189173 CCTGCACGGAAATCA CCTCACAGCCCTCCCGGGC CAGG GCCAGGGTGAGCTGTGAGA TATTGACTTTAGCGA TERM 5859 4189177 - 4189216 + g 100 -17.8 -2.51888 | opp_overlap 4189176 4189173, overlap 4189176 4189174 4189168 CTGCACGGAAATCAC CTCACAGCCCTCCCGGGC CAGG GCCAGGGTGAGCTGTGAG ATATTGACTTTAGCG TERM 5860 4189701 - 4189665 - G 75 -10.2 -3.31792 | gap 1 CTACCAGCTCCAGAA GCTCCGGGATT-CCCTC AAAG GAGGGTAAGCCCAGAAC ACGGTACTGCTCCTT Dhaf_3949 4190811 - 4190152 - | two component transcriptional regulator, winged helix family TERM 5861 4190855 - 4190899 + H 100 -24 -3.53343 | gap 1, opp_overlap 4190858 4190861 4190865, overlap 4190858 4190861 4190865 4190885 AGTGGGGCCGAGCGA GAATAACAAATCGGCTGCAGG AAAA CC-GCAGCCGATTTGTTATTC TTTACAGAACGGCTT TERM 5862 4190896 - 4190858 - H 100 -21.3 -3.35679 | opp_overlap 4190858 4190855 4190861 4190865 4190885, overlap 4190861 4190865 GGGGCCGAGCGAGAA TAACAAATCGGCTGCAG GAAAA CCGCAGCCGATTTGTTA TTCTTTACAGAACGG TERM 5863 4190858 - 4190896 + H 100 -19.9 -3.90744 | gap 1, opp_overlap 4190858 4190861 4190865, overlap 4190855 4190861 4190865 4190885 GGGGCCGAGCGAGAA TAACAAATCGGCTGCAGG AAAA CC-GCAGCCGATTTGTTA TTCTTTACAGAACGG TERM 5864 4190861 - 4190893 + H 100 -17.2 -4.08557 | gap 1, opp_overlap 4190858 4190861 4190865, overlap 4190858 4190855 4190865 4190885 GCCGAGCGAGAATAA CAAATCGGCTGCAGG AAAA CC-GCAGCCGATTTG TTATTCTTTACAGAA TERM 5865 4190893 - 4190861 - H 100 -18.6 -3.8211 | opp_overlap 4190861 4190858 4190855 4190865 4190885, overlap 4190858 4190865 GCCGAGCGAGAATAA CAAATCGGCTGCAG GAAAA CCGCAGCCGATTTG TTATTCTTTACAGAA TERM 5866 4190889 - 4190865 - H 100 -13.6 -4.52415 | opp_overlap 4190865 4190861 4190858 4190855 4190885, overlap 4190861 4190858 AGCGAGAATAACAAA TCGGCTGCAG GAAAA CCGCAGCCGA TTTGTTATTCTTTAC TERM 5867 4190865 - 4190889 + H 100 -12.2 -4.62803 | gap 1, opp_overlap 4190861 4190858 4190865, overlap 4190861 4190858 4190855 4190885 AGCGAGAATAACAAA TCGGCTGCAGG AAAA CC-GCAGCCGA TTTGTTATTCTTTAC Dhaf_3951 4191475 - 4192695 + | restriction modification system DNA specificity domain protein TERM 5868 4193012 - 4192991 - g 76 -7.3 -4.36903 | opp_overlap 4192991 4192994, overlap 4192992 CTCACGAAAGACAAA CGACGATGG ATTT CCATCATCA TCTTAAAAGTGCAAT TERM 5869 4193238 - 4193213 - g 85 -10.4 -4.18018 | TGCTTGTAGCTAAAA CAGGGCTGCG CTTTTC CGAAGCCCTG GCCCTAACGCCTAAA TERM 5870 4193329 - 4193310 - g 73 -3.5 -4.98255 | overlap 4193311 4193320 CTGGAATTACAAAAA TGCCGAA GGAGGA TTCGGCG AAACCAAGAATCTCT Dhaf_3952 4192771 - 4193703 + | integrase family protein Dhaf_3953 4194967 - 4193726 - | restriction modification system DNA specificity domain protein TERM 5871 4194832 - 4194845 + g 74 -6.7 -4.4078 | AAACAATATCACCAT TCCAG TATT CTGGA TTTTCCTTAAAGGGA Dhaf_3954 4196591 - 4195014 - | type I restriction-modification system, M subunit TERM 5872 4195259 - 4195275 + g 70 -2.2 -4.89852 | gap 1, overlap 4195259 4195260 CCAAATGGGCATATT G-GGGGC TACT GCTCCGC TTTTTATAAGTATCA TERM 5873 4196511 - 4196498 - G 73 -2.3 -5.03715 | opp_overlap 4196498 AGTATTTGTAAAAAA CCAAC CCCA GTAGG TAGTTTTTATATTCA TERM 5874 4196595 - 4196607 + r 91 -5.5 -5.66868 | GAGTTCACTCATTGT TGGGG TCC CTCCA TTTTTTTAGTTCATT Dhaf_3955 4199712 - 4196584 - | type I site-specific deoxyribonuclease, HsdR family TERM 5875 4199222 - 4199248 + g 71 -10.3 -2.78263 | gap 1, opp_overlap 4199233, overlap 4199218 TCAATTTGTTGGAAG GCTTGCCAATAG CCAT CT-TTGGCAAGC TCGCTTTTAAGTTCT Dhaf_3956 4199945 - 4199748 - | hypothetical protein TERM 5876 4200044 - 4200088 + r 76 -10.8 -2.62656 | opp_overlap 4200046, overlap 4200043 4200052 TTTTGAATACAAGCA AAGCAATACCCCACAGATTT TGCCT GAATCTGCGGGGTATTGCGG GTTCTGGATCGGTTT TERM 5877 4200086 - 4200046 - R 100 -19.3 -4.08221 | opp_overlap 4200044 4200043 4200052 TTGAATACAAGCAAA GCAATACCCCACAGATT TTGCCTG AATCTGCGGGGTATTGC GGGTTCTGGATCGGT TERM 5878 4200052 - 4200080 + r 72 -9.6 -3.07233 | opp_overlap 4200046, overlap 4200044 4200043 ACAAGCAAAGCAATA CCCCACAGATTT TGCCT GAATCTGCGGGG TATTGCGGGTTCTGG TERM 5879 4200541 - 4200498 - R 100 -25.6 -5.1675 | opp_overlap 4200498 TCATTGAGGAAAAAA GGTCTGTCCGAAATAGGTAC GCGC GTACCAATTTCGGACAGACC TTTTTTCATAGAGTC TERM 5880 4200498 - 4200541 + r 100 -25.6 -5.15634 | opp_overlap 4200498 TCATTGAGGAAAAAA GGTCTGTCCGAAATAGGTAC GCGC GTACCAATTTCGGACAGACC TTTTTTCATAGAGTC Dhaf_3957 4200877 - 4200635 - | hypothetical protein Dhaf_3958 4201189 - 4201019 - | YdfF Dhaf_3959 4201800 - 4201186 - | transcriptional regulator, TetR family TERM 5881 4201776 - 4201790 + g 93 -5 -5.66989 | TAGTCTGCACTTTCT GCAATT GAC GATTGC TTTTTTTCATATTTC TERM 5882 4201963 - 4201929 - R 76 -10.7 -2.69869 | opp_overlap 4201928 4201927, overlap 4201925 4201926 ATCATACCAAAGCCA CGGGGCAAGCCCG GATAATAAA CGGACTTGCCCTG CACTTTTTGGCATTG Dhaf_3960 4203750 - 4202017 - | fumarate reductase/succinate dehydrogenase flavoprotein domain protein TERM 5883 4203073 - 4203091 + g 80 -4.4 -5.28831 | CAGTACGCTGAAGGC CTCCGCCG TTC CGTTGGGG TTTTGTTTTGTTAAT TERM 5884 4203414 - 4203389 - G 81 -12 -3.01712 | opp_overlap 4203405 CCCGCCTGGGTAACA GCATTCCTGA CGGCGT TCAGGAATGC GGCACTGCTGATTGT TERM 5885 4203634 - 4203655 + g 71 -9.3 -3.53012 | opp_overlap 4203633, overlap 4203630 GTCACCGGGAACCAT CCCTGCCTC CGCC GGGGCTGGG TTTCCCCCACCGGCG Dhaf_3961 4203853 - 4204650 + | transcriptional regulator, MerR family Dhaf_3962 4206038 - 4204647 - | Chorismate binding-like protein TERM 5886 4205142 - 4205154 + g 71 -6.3 -4.21465 | ATCCTGCAACAATTC CTCTT TTA AAGAG TTATTTGCTTTTGAA TERM 5887 4206050 - 4206105 + r 100 -9.9 -4.66953 | gap 2, opp_overlap 4206061, overlap 4206055 4206056 GCATGGCTAATACCT GCTTTAA--CAAAGCCCATGTGTCGGG CGGG CTCGACACATGGGCTTCGCCTTTGGGC TTTTTCAAGTATTAG TERM 5888 4206055 - 4206098 + r 100 -14.6 -3.8046 | opp_overlap 4206061, overlap 4206050 4206056 GCTAATACCTGCTTT AACAAAGCCCATGTGTCGGG CGGG CTCGACACATGGGCTTCGCC TTTGGGCTTTTTCAA TERM 5889 4206056 - 4206097 + r 100 -18.1 -2.87553 | opp_overlap 4206061, overlap 4206055 4206050 CTAATACCTGCTTTA ACAAAGCCCATGTGTCGGG CGGG CTCGACACATGGGCTTCGC CTTTGGGCTTTTTCA TERM 5890 4206092 - 4206061 - R 100 -18.8 -4.15222 | opp_overlap 4206056 4206055 4206050 ACCTGCTTTAACAAA GCCCATGTGTCGGG CGGG CTCGACACATGGGC TTCGCCTTTGGGCTT Dhaf_3963 4206954 - 4206172 - | hypothetical protein Dhaf_3964 4208011 - 4206929 - | Saccharopine dehydrogenase Dhaf_3965 4213699 - 4208030 - | amino acid adenylation domain protein TERM 5891 4209983 - 4209941 - G 85 -5.4 -5.28778 | overlap 4209965 ATGATTGAGAAAAAA GGCGGACAGGTCGGTAAAAT GAT ATTCCACCTGCCGGCCCTCC AGCTGGGGAATCAGA TERM 5892 4210218 - 4210237 + g 74 -2.8 -5.06451 | overlap 4210223 TGTCCCTGAATCATT TCCGGC AGCACATC GCTGGA TTTTTTCAGATAATC TERM 5893 4210612 - 4210595 - G 72 -6.2 -4.36914 | GCCTGTCTCATAAAA CCGGCC CGCCGC GGCCAG CATAGCCAGTTCCTG Dhaf_3966 4217316 - 4213735 - | amino acid adenylation domain protein TERM 5894 4214821 - 4214799 - G 71 -2.6 -4.87807 | overlap 4214803 CCAACATATCAAAAA GGACCGGAAC CGA ATTCCAAACC AATAGGGAATAGTGT TERM 5895 4215626 - 4215636 + g 70 -2.4 -4.96848 | overlap 4215601 TCTGCCAGTTCCCCG GCCC GTT GTGC TTTTTGTCTGGGCGG Dhaf_3967 4218925 - 4217306 - | AMP-dependent synthetase and ligase TERM 5896 4218742 - 4218765 + g 74 -9.5 -3.57263 | CCCGCCTTTGCCAAC CGGCCGCCA TTCTCC TGGCTGCCG TTTCCAGCTCCCGAT Dhaf_3968 4219706 - 4219008 - | 4'-phosphopantetheinyl transferase TERM 5897 4219607 - 4219617 + g 73 -8.2 -3.91984 | TAACGAGAAAGATCT GGGG TAT CCCC TTGTTTAACAAGTCT Dhaf_3969 4220443 - 4219703 - | Thioesterase TERM 5898 4220283 - 4220313 + g 91 -14.7 -3.09655 | CTTTCCTTGATTCTG GTCTCCCGGCCCG GATAG TGGGCCGGGAGAA TCTCTGTGTCTGTAA TERM 5899 4220517 - 4220532 + r 81 -4 -5.27335 | opp_overlap 4220517 4220527 CAGCCACCCCCAAAA GTTAGT ATAA GCTAAC TTTTTCTTTAAAAAA TERM 5900 4220573 - 4220549 - R 76 -2.8 -5.40072 | gap 1, opp_overlap 4220551, overlap 4220527 4220551 TTTTCTTTAAAAAAA TTGGCC-CTGC CCCG GCAAAGGCCTA AATTTGCTGAAGAGA Dhaf_3970 4222295 - 4220571 - | ABC transporter related Dhaf_3971 4224079 - 4222289 - | ABC transporter related TERM 5901 4223911 - 4223890 - GR 76 -10.1 -3.32844 | CTCCCCACCGGACAA GGCTCTCTG GGTC CAGGGAGCC CCCCGCAAAGACATT Dhaf_3972 4224260 - 4224042 - | hypothetical protein Dhaf_3973 4225906 - 4224257 - | extracellular solute-binding protein family 5 TERM 5902 4225048 - 4225064 + g 77 -4.4 -5.01811 | CCTTATCCACCGCCG CGCCAA AGCCC TTGGTG TTTTTCATTTCCTGA TERM 5903 4225205 - 4225220 + g 76 -9 -3.86015 | CACATCCGGCTGCTC TCCCCA GTAA TGGGGA TTTCTCACAAAGGTA Dhaf_3974 4226734 - 4225910 - | ABC transporter related TERM 5904 4226148 - 4226134 - G 73 -2.1 -5.07486 | CATGGGTAATAAAAA TCAAG GTAAA CCTGA GCTTTTCCTGTAAAT TERM 5905 4226255 - 4226230 - G 71 -3.9 -4.72272 | gap 1, overlap 4226233 4226238 TCGCTTCATCAAAAA TCAGGCAAGCGG GTT CCGC-CGCCAAA GCTCTGGCAATGGCT Dhaf_3975 4227510 - 4226740 - | ABC transporter related Dhaf_3976 4228318 - 4227500 - | binding-protein-dependent transport systems inner membrane component Dhaf_3977 4229268 - 4228315 - | binding-protein-dependent transport systems inner membrane component TERM 5906 4228775 - 4228761 - G 73 -5.6 -4.64598 | CAATCACCTGAAAAA CCGGCA TCC TGACGG CAAAGACCGTGAGCA Dhaf_3978 4230427 - 4229471 - | transcriptional regulator, AraC family TERM 5907 4230995 - 4230973 - H 83 -12 -2.8001 | opp_overlap 4230965, overlap 4230976 ATAAGCTTGACTATA GTAGGCGGAA TGC TTCCGCCTGC CAAAAATCATTTAAG TERM 5908 4230992 - 4230976 - H 88 -12.3 -2.66435 | opp_overlap 4230965, overlap 4230973 AGCTTGACTATAGTA GGCGGAA TGC TTCCGCC TGCCAAAAATCATTT TERM 5909 4231753 - 4231781 + G 84 -13.2 -2.71364 | opp_overlap 4231753 CGTACAGTCCACAAA CGAGCTGGTAGG CAGGA CCTGTCAGCTCG TGCTTGAAAAGCTGG TERM 5910 4231781 - 4231753 - g 79 -9.5 -3.91144 | opp_overlap 4231753 CGTACAGTCCACAAA CGAGCTGGTAGGC AGG ACCTGTCAGCTCG TGCTTGAAAAGCTGG Dhaf_3979 4231025 - 4232071 + | two component transcriptional regulator, AraC family TERM 5911 4232222 - 4232210 - g 71 -6.9 -4.30014 | overlap 4232211 CCCACGAATTGAAAA CCCCG GCG CGGGA GATCAGCCTTTATGC Dhaf_3980 4232092 - 4234071 + | histidine kinase TERM 5912 4235091 - 4235076 - g 70 -2.4 -4.91852 | overlap 4235078 GTCATTAAAAACAAA GTGACC AACT GGCCCC GCATAGAATCACCGG Dhaf_3981 4234392 - 4235327 + | Acetamidase/Formamidase Dhaf_3982 4235383 - 4236624 + | major facilitator superfamily MFS_1 TERM 5913 4236697 - 4236665 - T 100 -18.6 -4.32049 | gap 1, opp_overlap 4236659 GAGAACTCATCAAAA CAATCCGGT-GGCGC TACG GCGCCAACCGGATTG CCGGAGTTTAAGCAT TERM 5914 4237167 - 4237194 + T 74 -7 -4.25388 | opp_overlap 4237169, overlap 4237169 TTAAACGGCTATTAT AAGGAGTCATGT TCGC GCATGGCTCCTC TTTGGTTTTAGTATA TERM 5915 4237169 - 4237192 + T 78 -9.6 -3.71107 | opp_overlap 4237169, overlap 4237167 AAACGGCTATTATAA GGAGTCATGT TCGC GCATGGCTCC TCTTTGGTTTTAGTA Dhaf_3983 4238158 - 4237283 - | transcriptional regulator, AraC family Dhaf_3984 4239295 - 4238177 - | peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase TERM 5916 4239381 - 4239415 + r 86 -5.7 -5.30686 | gap 1, opp_overlap 4239381 4239382 TGCTGTTTTGAAAAA TGCAGAGGAGCTGCCA AACA TGTTTGC-CCTCTGCA TTTTTTATAAATCTT Dhaf_3985 4240005 - 4239712 - | hypothetical protein TERM 5917 4239770 - 4239801 + g 72 -6 -4.43877 | opp_overlap 4239791 4239793 TTGCTTTCTAACACC TTTGCTTTGACTAA TGAA TTAGACAAAACAAA TTTGTTTAGCCATTC Dhaf_3986 4240921 - 4240433 - | GCN5-related N-acetyltransferase Dhaf_3987 4241128 - 4240964 - | hypothetical protein Dhaf_3988 4241833 - 4241237 - | VanZ family protein TERM 5918 4241781 - 4241770 - G 91 -2.2 -5.88565 | TCCATAACAAAAAAA TGCC ACGA AGCA CAACCCACGGAACTC Dhaf_3989 4242654 - 4242037 - | metal dependent phosphohydrolase Dhaf_3990 4243021 - 4242812 - | hypothetical protein Dhaf_3991 4243576 - 4243118 - | GCN5-related N-acetyltransferase Dhaf_3992 4244228 - 4243911 - | hypothetical protein Dhaf_3993 4245808 - 4244459 - | Radical SAM domain protein TERM 5919 4245974 - 4245957 - R 80 -9.1 -3.91897 | opp_overlap 4245957 CCCCCTAGCCAGAAA GCCGCCA TGGA TAGCGGC TCCCTTAAAGATTGT Dhaf_3994 4246113 - 4245994 - | hypothetical protein Dhaf_3996 4247181 - 4248425 + | transposase IS4 family protein TERM 5920 4248634 - 4248624 - T 86 -2.6 -5.80364 | opp_overlap 4248624 ACCTCAATAAAAAAA TAAT TGA ATTA TTAAATTTAAATATA TERM 5921 4249150 - 4249168 + T 86 -8.1 -4.64846 | opp_overlap 4249149 ACCTTCACTAAGTAG GACCTCC GCAAA GGGGGTC TTTTCTCATTTCTAC Dhaf_3999 4250730 - 4249774 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Dhaf_4000 4251475 - 4250930 - | bifunctional deaminase-reductase domain protein Dhaf_4001 4251637 - 4251807 + | hypothetical protein Dhaf_4002 4251908 - 4252222 + | filamentation induced by cAMP protein Fic Dhaf_4003 4252423 - 4252322 - | hypothetical protein Dhaf_4004 4252594 - 4252794 + | hypothetical protein Dhaf_4005 4253365 - 4252985 - | hypothetical protein TERM 5922 4253083 - 4253069 - G 79 -3.5 -5.25803 | overlap 4253079 AACCGGCAGAAAAAA CCTGA ATAGA CCAGG GGTTCCTGCTAAGTA TERM 5923 4253556 - 4253601 + r 83 -11.9 -2.78216 | opp_overlap 4253558 4253560, overlap 4253570 AAAGCAAGCTCAATA AACATGTCCCCAAATGCGACA ACGT TGTCGCATTTGGGGACAAACC TCCTTAGTCACACTC TERM 5924 4253599 - 4253558 - R 100 -21.1 -4.21319 | opp_overlap 4253556 4253570, overlap 4253560 AGCAAGCTCAATAAA CATGTCCCCAAATGCGACA ACGT TGTCGCATTTGGGGACAAA CCTCCTTAGTCACAC TERM 5925 4253597 - 4253560 - R 100 -25.9 -3.70139 | opp_overlap 4253556 4253570, overlap 4253558 CAAGCTCAATAAACA TGTCCCCAAATGCGACA ACGT TGTCGCATTTGGGGACA AACCTCCTTAGTCAC TERM 5926 4253570 - 4253587 + r 78 -9.9 -3.53091 | opp_overlap 4253560 4253558, overlap 4253556 AAACATGTCCCCAAA TGCGACA ACGT TGTCGCA TTTGGGGACAAACCT Dhaf_4006 4253772 - 4253605 - | hypothetical protein TERM 5927 4253896 - 4253863 - R 100 -8.2 -4.99134 | gap 1, opp_overlap 4253863 AGGGGAAATTAAAAA GCGCATGCG-AGGTT TTTTC ACCCTACACATGCGC TATGCTTCGTTATCT TERM 5928 4254405 - 4254362 - R 100 -27.8 -4.59773 | opp_overlap 4254362 CCTCATCCTCAAAAA GGGCTGTCCGAAATAAGTAC GCGC GTACCTATTTCGGACAGCCC TTCTCCTTTGCACAG TERM 5929 4254362 - 4254405 + r 100 -25.6 -3.60151 | opp_overlap 4254362 CCTCATCCTCAAAAA GGGCTGTCCGAAATAAGTAC GCGC GTACCTATTTCGGACAGCCC TTCTCCTTTGCACAG Dhaf_4007 4255289 - 4254462 - | tRNA/rRNA methyltransferase (SpoU) TERM 5930 4255333 - 4255350 + r 71 -8.4 -3.51156 | opp_overlap 4255333, overlap 4255331 CCCCCATACTCAGAA GTCGCC ATAAAC GGCGAC TCTTTAATCATCTTT TERM 5931 4255350 - 4255333 - R 71 -9.1 -3.39327 | opp_overlap 4255333 4255331 CCCCCATACTCAGAA GTCGCCA TAAA CGGCGAC TCTTTAATCATCTTT Dhaf_4008 4256090 - 4255413 - | hypothetical protein Dhaf_4009 4258107 - 4256074 - | putative ATP-dependent helicase TERM 5932 4257732 - 4257763 + g 77 -8.8 -4.24887 | opp_overlap 4257741, overlap 4257741 AAATATTAATCTTTT CTATGAAATCCTCG GCAT CGAAGTTTTCATAG TTTATTAACTCTATT TERM 5933 4258084 - 4258106 + g 80 -2.8 -5.47218 | opp_overlap 4258093, overlap 4258093 ATTTATTTCTACCTG TGAATAAAAG TAA TTTTTACTCA TTTTTTTACCTACCC Dhaf_4010 4258863 - 4258405 - | hypothetical protein TERM 5934 4259104 - 4259139 + r 79 -10.8 -3.09491 | opp_overlap 4259089 4259103 4259100 4259104, overlap 4259106 TGCAACACATATAAT GATTTTGATTATATAT TTGC ATATATCATCAAAATC TTCAATAAGTATCTA TERM 5935 4259139 - 4259104 - R 77 -10.8 -2.80895 | opp_overlap 4259104 4259106, overlap 4259089 4259103 4259100 TGCAACACATATAAT GATTTTGATTATATAT TTGC ATATATCATCAAAATC TTCAATAAGTATCTA Dhaf_4011 4260184 - 4259141 - | hypothetical protein TERM 5936 4259787 - 4259805 + g 80 -3.9 -5.27938 | overlap 4259797 TCTCGGCACTGTTCA TGTTCTT CTTCA AAGAGCA TTTTTGTTTGAACAT TERM 5937 4260534 - 4260478 - R 100 -16.1 -5.1675 | gap 1, opp_overlap 4260478 4260480, overlap 4260480 4260512 GGACGTACTAAAAAA CATGCTCCCGTTAAGGCAGACAGGCC ATAAAA AACCTGTC-ACCCTAACGGGAGCATC TATTCTCTATCTACA TERM 5938 4260478 - 4260534 + r 78 -10.3 -3.39896 | gap 1, opp_overlap 4260478 4260480 4260512, overlap 4260480 GGACGTACTAAAAAA CATGCTCCCGTTAAGGCAGACAGG CCATAAAAAA CCTGTCACCC-TAACGGGAGCATC TATTCTCTATCTACA TERM 5939 4260480 - 4260532 + r 100 -12.9 -3.26387 | gap 1, opp_overlap 4260478 4260480 4260512, overlap 4260478 ACGTACTAAAAAACA TGCTCCCGTTAAGGCAGACAGG CCATAAAAAA CCTGTCACCC-TAACGGGAGCA TCTATTCTCTATCTA TERM 5940 4260532 - 4260480 - R 100 -18.7 -4.2131 | gap 1, opp_overlap 4260480 4260478, overlap 4260478 4260512 ACGTACTAAAAAACA TGCTCCCGTTAAGGCAGACAGGCC ATAAAA AACCTGTC-ACCCTAACGGGAGCA TCTATTCTCTATCTA TERM 5941 4260528 - 4260512 - R 76 -2.9 -5.26918 | opp_overlap 4260480 4260478, overlap 4260480 4260478 ACAGGCCATAAAAAA CCTGTCA CCC TAACGGG AGCATCTATTCTCTA Dhaf_4012 4261228 - 4260623 - | orotate phosphoribosyltransferase Dhaf_4013 4262000 - 4261272 - | orotidine 5'-phosphate decarboxylase Dhaf_4014 4263105 - 4262161 - | dihydroorotate dehydrogenase family protein Dhaf_4015 4263916 - 4263095 - | oxidoreductase FAD/NAD(P)-binding domain protein TERM 5942 4263447 - 4263436 - G 73 -7.2 -4.30978 | overlap 4263438 TGGAACTCAGGAAAA CCGG GATA CCGG CATCCTGCCAAAGCC Dhaf_4016 4267166 - 4263969 - | carbamoyl-phosphate synthase, large subunit TERM 5943 4265622 - 4265597 - G 71 -7.5 -4.12188 | CCACCATCTTGAAAA CCGGCTGCAAA CCTT TTTCCTGCCGG TAAGCATATATTTCT TERM 5944 4266098 - 4266124 + g 87 -10.8 -4.11216 | opp_overlap 4266096 TAACCACCACATAGT CCAGAGCCGGTT CAA AACAGGCGCTGG TTTTGCCGGTGACGG Dhaf_4017 4268336 - 4267233 - | carbamoyl-phosphate synthase, small subunit Dhaf_4018 4269653 - 4268349 - | dihydroorotase, multifunctional complex type TERM 5945 4269207 - 4269186 - G 80 -9.3 -4.15565 | GCCATCATCGGAAAA GCCCGCCGC TCCT GCGGCAGCC AGTTCCACCATCTCC Dhaf_4019 4270578 - 4269640 - | aspartate carbamoyltransferase TERM 5946 4270018 - 4270003 - G 73 -10.4 -3.19463 | TTCAGGAGGCAGCAA GGTGGG GGGC CCCACC AGAACCACTTCCGCG TERM 5947 4270677 - 4270655 - R 100 -14.2 -5.55769 | CCTGATAACAAAAAA TCCCCTTGCC AAA GGCAAGAGGA TATAAGGATACAAAG Dhaf_4020 4271345 - 4270794 - | Uracil phosphoribosyltransferase TERM 5948 4271395 - 4271376 - R 100 -10 -5.36441 | opp_overlap 4271376 TCGGCATATAAAAAA CTGTCCGC CACA GCAGACAG TTTACCCTACTTCTT TERM 5949 4271376 - 4271395 + r 70 -7.8 -3.6501 | opp_overlap 4271376 TCGGCATATAAAAAA CTGTCCGC CACA GCAGACAG TTTACCCTACTTCTT Dhaf_4021 4272746 - 4271565 - | hypothetical protein TERM 5950 4272278 - 4272296 + g 75 -11.7 -2.71268 | opp_overlap 4272278, overlap 4272275 4272273 TTTCAAAAGGCAAAA GCGGCAG CATCC CTGCCGC TAATGTCTGGTCAAG TERM 5951 4272296 - 4272278 - G 93 -11.7 -4.4267 | opp_overlap 4272278 4272275 4272273 TTTCAAAAGGCAAAA GCGGCAG CATCC CTGCCGC TAATGTCTGGTCAAG Dhaf_4022 4273796 - 4272792 - | pseudouridine synthase, RluA family Dhaf_4023 4274286 - 4273831 - | lipoprotein signal peptidase Dhaf_4024 4275032 - 4274364 - | transcriptional regulator, TraR/DksA family Dhaf_4025 4275428 - 4275051 - | hypothetical protein TERM 5952 4275563 - 4275602 + r 91 -12.2 -3.55563 | opp_overlap 4275570, overlap 4275570 ATGACATCCGGATAG GGAAAAAGCCGGCAAACT CTAT AGTTCACCGGCTTTTGCC TTTCGCGAATAAACT TERM 5953 4275570 - 4275595 + r 75 -7.5 -4.35524 | opp_overlap 4275570, overlap 4275563 CCGGATAGGGAAAAA GCCGGCAAACT CTAT AGTTCACCGGC TTTTGCCTTTCGCGA TERM 5954 4275595 - 4275570 - R 100 -11.9 -4.70659 | opp_overlap 4275570 4275563 CCGGATAGGGAAAAA GCCGGCAAACT CTAT AGTTCACCGGC TTTTGCCTTTCGCGA Dhaf_4026 4276476 - 4275640 - | Pirin domain protein TERM 5955 4275847 - 4275829 - G 70 -8.1 -3.90744 | overlap 4275831 CCCCTCCCCAAACAA TACCGCC GTTTT GGCGGCA ATCAGCTCCCCGTTG TERM 5956 4276041 - 4276094 + g 71 -2.6 -5.00616 | overlap 4276031 TCTCCGCGCCCTCTT TGGCCGC-TTTGCCTATCTTGTCT TGGGTAAT GGACAA-ATAGGCGGGCGGGGCCA TTTTTTCCCCACGGG Dhaf_4027 4277387 - 4276560 - | Xylose isomerase domain protein TIM barrel TERM 5957 4276906 - 4276894 - G 73 -3.3 -4.98531 | CTGTCAAAGCAAAAA CCCAA GGC CCGGG AGGCAATATGTTGAA TERM 5958 4277480 - 4277505 + r 71 -8.3 -3.55946 | gap 1, opp_overlap 4277485, overlap 4277478 4277485 TAGCATAAAAATAAA GA-AAACCCGCC TCA GGCGGGTTGCTC TCTTCTTTAAAGTCC TERM 5959 4277485 - 4277499 + r 100 -12.8 -3.43985 | opp_overlap 4277485, overlap 4277480 4277478 TAAAAATAAAGAAAA CCCGCC TCA GGCGGG TTGCTCTCTTCTTTA TERM 5960 4277499 - 4277485 - R 100 -12.8 -5.3167 | opp_overlap 4277480 4277478 4277485 TAAAAATAAAGAAAA CCCGCC TCA GGCGGG TTGCTCTCTTCTTTA Dhaf_4028 4278449 - 4277526 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5961 4278640 - 4278625 - R 84 -6.1 -5.06585 | GAAATCAGAGAAAAA GGAGC TTAAAC GCTCC CCACCGGCGTGAAAT Dhaf_4029 4279271 - 4278630 - | hypothetical protein TERM 5962 4278789 - 4278807 + g 73 -2.2 -5.08824 | CTGAATGATATTGAC CCAGTGCC AGC GGTCCAGG TTTTTTACCTCCCCA Dhaf_4030 4280545 - 4279301 - | HI0933 family protein TERM 5963 4279852 - 4279869 + g 75 -5.5 -4.74103 | overlap 4279848 TAAATAAGATTTCCC CTTGGGC TTTG GCCAAAG TTTTTCCCTTGACCA TERM 5964 4281042 - 4281025 - g 100 -10.5 -4.6856 | opp_overlap 4281029 GAAATATGCCAAAAA GCCGGCG TCAC CACCGGC GCTCTGTACAAAAGA Dhaf_4031 4280917 - 4281528 + | transcriptional regulator, TetR family TERM 5965 4281612 - 4281596 - f 100 -10.1 -4.45945 | ATTCACTAACTAAAA CTCCCCC CAA GGAGGAG AATAAATAAAAAAAA TERM 5966 4282157 - 4282129 - g 75 -3.7 -5.02074 | TGATGCGCCAAAAAA CCATCGCCGCGGA GCG TTCGCAGAAACGG GAATACAGTACGGAT TERM 5967 4282342 - 4282318 - g 93 -12.9 -3.79747 | TTACCTATGACCAAA TGGGAGCGAAT CTG ATTCGCACCCA AACGCTGGCCGACGG Dhaf_4032 4281768 - 4282421 + | hypothetical protein TERM 5968 4282607 - 4282570 - T 100 -9.1 -5.44119 | opp_overlap 4282597 TTTATTGTAAAAAAA CCCGTCCCAGGACAAGA AACT CCTCTTCCTGTGACAGG TTTATTTTATTAGCG Dhaf_4033 4282654 - 4282556 - | hypothetical protein TERM 5969 4282597 - 4282607 + g 83 -6.8 -4.87892 | opp_overlap 4282570 CAAGAAACTCCTCTT CCTG TGA CAGG TTTATTTTATTAGCG Dhaf_4034 4283273 - 4282695 - | Propanediol utilization protein Dhaf_4035 4283599 - 4283390 - | hypothetical protein TERM 5970 4283577 - 4283601 + g 95 -13.7 -3.89822 | TCCTGCTCAATGGCG GGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCTGCATG TERM 5971 4283876 - 4283846 - R 84 -9.8 -3.78922 | gap 1, opp_overlap 4283846 AAAAAAGTATCGAAA GATCTCCC-GCCA AAAAAA CGGCAGGGAGATC TTTTTACTAATCATA TERM 5972 4283846 - 4283876 + r 100 -9.1 -4.78107 | gap 1, opp_overlap 4283846 AAAAAAGTATCGAAA GATCTCCC-GCC AAAAAAAC GGCAGGGAGATC TTTTTACTAATCATA Dhaf_4036 4285401 - 4283938 - | Glycine dehydrogenase (decarboxylating) TERM 5973 4284853 - 4284877 + g 70 -9.9 -3.16564 | CTGAACAATGTCATA GCCGGCCATGG CCC CTGTGGCCGGG TTGGTCCCATGAGCG TERM 5974 4285313 - 4285288 - G 81 -7.6 -4.58395 | opp_overlap 4285304, overlap 4285304 CTTATCTCTTAAAAA CTCTTGAGGA ATCAGA TCCTCGAGAG GAATTTCCGGCACAT Dhaf_4037 4286738 - 4285398 - | Glycine dehydrogenase (decarboxylating) Dhaf_4038 4287125 - 4286739 - | glycine cleavage system H protein Dhaf_4039 4288355 - 4287258 - | glycine cleavage system T protein TERM 5975 4288174 - 4288159 - G 75 -3.2 -5.05782 | AGGTACTGCAAAAAA GCAAGG CTAT CCTTTC CCTTCAACTCCACCT TERM 5976 4288230 - 4288214 - G 73 -3.5 -4.86133 | opp_overlap 4288219 GAGAGACATCAAAAA GCCCCGC TTT GCTGCGC ACGGCCTTGTGCTCC TERM 5977 4288474 - 4288447 - R 100 -7.8 -5.79595 | gap 1, opp_overlap 4288447 GGGTAAAATAAAAAA CAGAGAATAGCAC GTC GCGCTA-CCTCTG TCCTTTGACCTGAGA Dhaf_4040 4289650 - 4288793 - | methyl-accepting chemotaxis sensory transducer TERM 5978 4289326 - 4289316 - G 75 -3.2 -5.14563 | TCCCGGAGTAAAAAA GCAA TCA TCGC CGCTGTGACCTTCGC TERM 5979 4289896 - 4289849 - R 100 -18.1 -2.87564 | opp_overlap 4289859, overlap 4289851 4289856 4289859 TTATCGTTTTAGATA CATTAAACAAGACTTGAGCAG ATGGTA CCGCCCAAGTCTTATTTAATG GAAATATTGAAGAAA TERM 5980 4289894 - 4289851 - R 100 -14.9 -2.98942 | opp_overlap 4289859, overlap 4289849 4289856 4289859 ATCGTTTTAGATACA TTAAACAAGACTTGAGCAG ATGGTA CCGCCCAAGTCTTATTTAA TGGAAATATTGAAGA TERM 5981 4289889 - 4289856 - R 89 -10.4 -3.91196 | opp_overlap 4289859, overlap 4289851 4289849 4289859 TTTAGATACATTAAA CAAGACTTGAGCAG ATGGTA CCGCCCAAGTCTTA TTTAATGGAAATATT TERM 5982 4289886 - 4289859 - R 88 -9.9 -4.07595 | opp_overlap 4289859, overlap 4289856 4289851 4289849 AGATACATTAAACAA GACTTGAGCAG ATGGTA CCGCCCAAGTC TTATTTAATGGAAAT Dhaf_4041 4292689 - 4289921 - | isoleucyl-tRNA synthetase TERM 5983 4291509 - 4291520 + g 71 -4.4 -4.80453 | opp_overlap 4291509 CAACGCCAGCAATGA GCAT AGCT ATGC TTTATTTTATCCTCA TERM 5984 4292766 - 4292742 - R 90 -5.7 -5.47159 | gap 1 TCTGAATATAAAAAA TCCCGCACCC AAAAAA GGG-ACGGGA TATCACTCGCGGTAC TERM 5985 4292867 - 4292883 + r 73 -5.1 -4.72272 | TTCTGCACTTCACTC TAAGGGG ATA CTCCTTG TTTTTCCTCACAGGC Dhaf_4042 4293485 - 4293018 - | hypothetical protein TERM 5986 4293468 - 4293450 - G 77 -8.8 -4.30719 | overlap 4293451 GCCCTGCACAAGAAA GTCGGAGC CAA GCTCCGAA TACAAAATACTCTTC TERM 5987 4293467 - 4293451 - G 82 -12.3 -3.1811 | overlap 4293450 CCCTGCACAAGAAAG TCGGAGC CAA GCTCCGA ATACAAAATACTCTT Dhaf_4043 4294016 - 4293558 - | DivIVA family protein Dhaf_4044 4294827 - 4294030 - | RNA-binding S4 domain protein Dhaf_4045 4295126 - 4294839 - | protein of unknown function YGGT Dhaf_4046 4295579 - 4295130 - | protein of unknown function DUF552 Dhaf_4047 4296302 - 4295601 - | alanine racemase domain protein TERM 5988 4295815 - 4295785 - G 82 -5.5 -5.00884 | gap 1, overlap 4295814 AGCTCCCGGAAAAAA CCTTGAGTATCCTC AGGG GAAG-CACCCAAGG CACCGATGGTCATCA TERM 5989 4296223 - 4296241 + g 75 -8 -4.18197 | GCCAACAGCTTGATT GCGGATGG ATC CCGGCCGC TTTTCACTGCAGCCT Dhaf_4048 4297370 - 4296372 - | hypothetical protein TERM 5990 4297284 - 4297260 - GR 74 -10 -3.14683 | AGATCCTGTCAGGAA GCTGGAACGG TAAAC CCATCCCAGC GAACCCAAGAGAAGA Dhaf_4049 4298742 - 4297336 - | PAS/PAC sensor signal transduction histidine kinase TERM 5991 4298073 - 4298047 - GR 88 -10.8 -3.87373 | opp_overlap 4298046 TACATTCCCGACAAA CTCCGTCCGGAG CAG CTCCAAACGGCG AATTTCCGTAATATC Dhaf_4050 4299429 - 4298746 - | two component transcriptional regulator, winged helix family Dhaf_4051 4300250 - 4299432 - | protein of unknown function DUF152 TERM 5992 4300373 - 4300341 - R 90 -11.3 -3.70149 | opp_overlap 4300341 TTTACACGATTTAAA GCCTTCCGAGGGG TGTATTG CCCTTCAGAAGGC TTTCTCTATCTTTTA TERM 5993 4300341 - 4300373 + r 100 -12.7 -4.27033 | opp_overlap 4300341 TTTACACGATTTAAA GCCTTCCGAGGGGTG TAT TGCCCTTCAGAAGGC TTTCTCTATCTTTTA Dhaf_4052 4300699 - 4300427 - | sporulation protein, YlmC/YmxH family Dhaf_4053 4301526 - 4300753 - | RNA polymerase, sigma 28 subunit, SigG Dhaf_4054 4302334 - 4301585 - | RNA polymerase, sigma 28 subunit, SigE TERM 5994 4301618 - 4301630 + g 78 -9.1 -4.07568 | opp_overlap 4301617 4301616 TTCTTTCCGCAAACG GCGGA TAA TCCGC TTTTCCAGCCGCGAA Dhaf_4055 4303224 - 4302334 - | peptidase U4 sporulation factor SpoIIGA TERM 5995 4302618 - 4302648 + g 75 -11.9 -2.5007 | gap 1, opp_overlap 4302612, overlap 4302615 CTTGCAAAACCGGGA GCAGCT-CTTCCGG CACC CCGGCAGCAGCTGC CTCTTCCTCAATTAA TERM 5996 4303468 - 4303423 - R 100 -30.9 -4.14345 | opp_overlap 4303437 CAACAGTAAAGCAAA GGAGTTGTCCGAAATAGGTAC GCGC GTACCTATTTCGGACAACTCC TGCAAAATCAGTTTG TERM 5997 4303437 - 4303454 + r 71 -8.5 -3.5393 | opp_overlap 4303423 AGGAGTTGTCCGAAA TAGGTAC GCGC GTACCTA TTTCGGACAACTCCT Dhaf_4056 4304285 - 4303512 - | prevent-host-death family protein TERM 5998 4304448 - 4304410 - R 100 -14.6 -4.98255 | opp_overlap 4304407 4304410 GGCCAATGATAAAAA GCCAGGCCTTGCCTGCTC ACT GAGCACTCAAAGCCTGAC TCCTATGTACTTCAT TERM 5999 4304410 - 4304448 + r 74 -10.2 -2.73334 | opp_overlap 4304410, overlap 4304407 GGCCAATGATAAAAA GCCAGGCCTTGCCTGCTC ACT GAGCACTCAAAGCCTGAC TCCTATGTACTTCAT Dhaf_4057 4305543 - 4304482 - | cell division protein FtsZ Dhaf_4058 4306107 - 4305778 - | protein of unknown function DUF1290 Dhaf_4059 4306851 - 4306126 - | Polypeptide-transport-associated domain protein FtsQ-type Dhaf_4060 4308193 - 4306934 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 6000 4307079 - 4307065 - G 85 -7 -4.84017 | overlap 4307034 4307031 4307052 4307066 4307067 AAGCCGCCAGAAAAA GTGCGG CTC CCGCCC GCAGATCCGTAGCCT Dhaf_4061 4309091 - 4308210 - | UDP-N-acetylenolpyruvoylglucosamine reductase Dhaf_4063 4311011 - 4309902 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Dhaf_4064 4312840 - 4311746 - | stage V sporulation protein E TERM 6001 4311866 - 4311830 - G 84 -12.9 -3.17763 | GCCATAGCTTAGGAA CGGCAGGGTGATTCCCG TCA CGGGAAGCACTCCGCTG ACCACACCCATATTG TERM 6002 4312460 - 4312487 + g 79 -11.4 -3.21912 | opp_overlap 4312450 4312459 ATCAATGGCTAAGAT GTTGGCCATG ACCAAAAC CATGGCCAAC TTGATCACTTCAGAA Dhaf_4065 4314228 - 4312864 - | UDP-N-acetylmuramoylalanine/D-glutamate ligase Dhaf_4066 4315263 - 4314256 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 6003 4314558 - 4314568 + g 93 -8.2 -5.06414 | opp_overlap 4314539 4314558 4314556 TATCCCCCATAAAGA CCCG GGC CGGG TTTTTATTAAAGCGG TERM 6004 4315112 - 4315100 - G 74 -9.1 -3.63352 | overlap 4315098 4315101 4315103 ACTAAAAAGATAATA CCACC CAT GGTGG GCGTTCCAGCCTTAG Dhaf_4067 4316750 - 4315302 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase TERM 6005 4315451 - 4315464 + g 73 -8.1 -4.08767 | AAGAATGAATCCTTT GGGGT GATA ACCCC TTTTCCAAAGCTCCG TERM 6006 4315896 - 4315924 + g 79 -10.3 -3.66178 | opp_overlap 4315904 TTGCTTTTCTCCTAG TGGGACAAGGG ACCTGTC CCCGTGTCCCA TTTCCGCTTGAAAGC TERM 6007 4316369 - 4316392 + g 71 -6.7 -4.20696 | overlap 4316386 TTTCACTTAAGACCG CCGCTACCA TATCTT TGGTGGTGG TTTTCCCATTGCTGC Dhaf_4068 4318227 - 4316740 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 6008 4317034 - 4317050 + g 88 -7.2 -5.04601 | GAGTTCCTCGGCAAT GGCTCC CATCT GGGGCC TTTTTCCTTTATCCC TERM 6009 4317563 - 4317578 + g 83 -9 -4.35644 | AGTTGGGCTTTCGCC TGGAGG TACT CCTCCA TTGTTTTATGATAAT Dhaf_4069 4320320 - 4318272 - | stage V sporulation protein D TERM 6010 4318871 - 4318854 - G 73 -8.3 -3.86346 | opp_overlap 4318830 GTATCCGGGCAGAAA GGCCCGG TAAC CCGTGCC GTTGGTGACCACAGA Dhaf_4070 4320853 - 4320374 - | Septum formation initiator TERM 6011 4320646 - 4320660 + g 73 -7.8 -3.99405 | GGTCGGCAATCTCCT TCTGGG TCG CCCGGA TTTGTGCTCCCTTAA Dhaf_4071 4321829 - 4320897 - | S-adenosyl-methyltransferase MraW Dhaf_4072 4322278 - 4321847 - | MraZ protein TERM 6012 4322544 - 4322508 - R 100 -8.8 -4.7657 | gap 1, opp_overlap 4322510 4322514 CAAAAATGCTAAAAA CACCAGGGGCATGAG TTTCCGGC CTCAAG-CCCTGGTG TCTCCACTTTTTGAG TERM 6013 4322605 - 4322564 - R 100 -18.3 -4.3739 | opp_overlap 4322576, overlap 4322565 CACTTTTTGAGAAAA CTCCCGGTCAAATTCCCAA GCGC TTGGGAATTTGACCGAAAA AAACGCCAAAAGACA TERM 6014 4322604 - 4322565 - R 100 -19.6 -3.22113 | opp_overlap 4322576, overlap 4322564 ACTTTTTGAGAAAAC TCCCGGTCAAATTCCCAA GCGC TTGGGAATTTGACCGAAA AAAACGCCAAAAGAC TERM 6015 4322576 - 4322593 + r 71 -8.5 -3.53012 | opp_overlap 4322565 4322564 AAACTCCCGGTCAAA TTCCCAA GCGC TTGGGAA TTTGACCGAAAAAAA TERM 6016 4322677 - 4322619 - R 100 -20.6 -3.74315 | gap 1, opp_overlap 4322669 4322670, overlap 4322669 4322670 AAAAACGCCAAAAGA CAGGTCCCATCATTCACT-GCCTGGAA GGAATA CTCCGGGCTAGTGAATAACGGGACCTG TCCCCTTGATTCAAA Dhaf_4073 4324105 - 4322693 - | Xanthine/uracil/vitamin C permease TERM 6017 4324239 - 4324272 + r 90 -11.1 -3.94002 | opp_overlap 4324249, overlap 4324240 TCGTTCGGATATTTT CTTGAATCAAGGGGA CCTG TCCCCTTGATTCACC TTTGATTCACTACTA TERM 6018 4324240 - 4324271 + r 100 -14.6 -2.95919 | opp_overlap 4324249, overlap 4324239 CGTTCGGATATTTTC TTGAATCAAGGGGA CCTG TCCCCTTGATTCAC CTTTGATTCACTACT Dhaf_4074 4325670 - 4324285 - | dihydrolipoamide dehydrogenase TERM 6019 4325460 - 4325482 + g 90 -10.6 -4.41616 | overlap 4325463 ACGCGCCCCCAAGCT GAATGCCGAA TTC TTCGGCATGC TTTATTTCCCGCCAT TERM 6020 4325463 - 4325479 + g 76 -10.9 -3.18452 | overlap 4325460 CGCCCCCAAGCTGAA TGCCGAA TTC TTCGGCA TGCTTTATTTCCCGC Dhaf_4075 4326974 - 4325685 - | methyl-accepting chemotaxis sensory transducer TERM 6021 4327167 - 4327137 - R 100 -10.6 -4.82901 | opp_overlap 4327137 4327140 TCTTCCCTACAAAAA GAACCTATTCTGCA CAA CACAAAATAGGTTC TCCTTTTCCACCTAT Dhaf_4076 4327390 - 4327193 - | Domain of unknown function DUF1858 TERM 6022 4327583 - 4327605 + r 100 -15 -3.14564 | opp_overlap 4327587, overlap 4327587 CGGGCGTGATCTCCT GAAACCTTCC ACC GGAAGGTTTC TTGATCGGAGACTCA TERM 6023 4327601 - 4327587 - R 78 -10 -3.54424 | opp_overlap 4327583 4327587 CGTGATCTCCTGAAA CCTTCC ACC GGAAGG TTTCTTGATCGGAGA TERM 6024 4327587 - 4327601 + r 93 -10 -4.24342 | opp_overlap 4327587, overlap 4327583 CGTGATCTCCTGAAA CCTTCC ACC GGAAGG TTTCTTGATCGGAGA Dhaf_4077 4329791 - 4327668 - | Beta-galactosidase/beta-glucuronidase-like protein TERM 6025 4327816 - 4327801 - G 71 -4.6 -4.55287 | overlap 4327802 4327810 GGCACCCACAGAAAA GCGGCA TAAC CACCGC CAATACGATGGACAT TERM 6026 4329913 - 4329895 - R 95 -5.2 -5.88565 | CGCACAATAAAAAAA GCCCGATC CAT GACCAGAC TTTAATCAATCGACT Dhaf_4078 4330368 - 4329934 - | ferric uptake regulator, Fur family TERM 6027 4330546 - 4330515 - R 100 -17.6 -3.85817 | opp_overlap 4330522, overlap 4330488 4330486 4330522 AGCTCGGCTGATAAA TTAAAAAGGGAGTC AACA GACTCCCTTTTTAA GAACATGAATTAAGC TERM 6028 4330539 - 4330522 - R 100 -11.3 -5.04601 | opp_overlap 4330522, overlap 4330486 4330515 CTGATAAATTAAAAA GGGAGTC AACA GACTCCC TTTTTAAGAACATGA TERM 6029 4330522 - 4330539 + r 100 -11.3 -4.57569 | opp_overlap 4330486 4330522 4330515 CTGATAAATTAAAAA GGGAGTC AACA GACTCCC TTTTTAAGAACATGA Dhaf_4079 4330726 - 4330556 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_4080 4331014 - 4330859 - | hypothetical protein Dhaf_4081 4332423 - 4331089 - | VWA containing CoxE family protein Dhaf_4082 4333322 - 4332438 - | ATPase associated with various cellular activities AAA_5 TERM 6030 4333454 - 4333427 - R 84 -2.6 -5.626 | GATTTTAGAAAAAAA TCCGCAGCTCCC CCAA GGAATTTACGGA TTTTACAATTTGCAG Dhaf_4083 4333866 - 4333492 - | hypothetical protein Dhaf_4084 4334711 - 4333986 - | hypothetical protein TERM 6031 4334639 - 4334629 - G 73 -3.2 -5.00616 | CGCTCCGTTAAAAAA GCTC CCA AAGC TTCGGCCCAATCGGT Dhaf_4085 4335462 - 4334791 - | metal dependent phosphohydrolase Dhaf_4086 4336299 - 4335541 - | histidinol phosphate phosphatase HisJ family Dhaf_4087 4337637 - 4336315 - | peptidase U62 modulator of DNA gyrase TERM 6032 4336657 - 4336632 - G 76 -9.7 -3.72695 | gap 1, opp_overlap 4336633, overlap 4336633 AGGTTCCGTAGGAAA TGCCTGTGGGAG GTG CTCCC-CAGGCT TTGGCGTCCTTCATC TERM 6033 4336656 - 4336633 - G 85 -13.2 -2.83403 | gap 1, opp_overlap 4336633, overlap 4336632 GGTTCCGTAGGAAAT GCCTGTGGGAG GTG CTCCC-CAGGC TTTGGCGTCCTTCAT TERM 6034 4336633 - 4336656 + g 93 -13.2 -3.64162 | gap 1, opp_overlap 4336633 4336632 GGTTCCGTAGGAAAT GCCTGTGGGAG GTG CTCCC-CAGGC TTTGGCGTCCTTCAT Dhaf_4088 4339133 - 4337637 - | peptidase U62 modulator of DNA gyrase TERM 6035 4339327 - 4339349 + r 95 -5.5 -5.78622 | overlap 4339328 CCTCTCTTTTACTTC ACTTGCGGC TGATT GTCGCAAGC TTTTTTTTGCCATGC TERM 6036 4339328 - 4339348 + r 80 -9 -4.06089 | overlap 4339327 CTCTCTTTTACTTCA CTTGCGGC TGATT GTCGCAAG CTTTTTTTTGCCATG TERM 6037 4339450 - 4339411 - R 100 -10.8 -4.5448 | opp_overlap 4339416, overlap 4339416 TAGTCAGAAAAATAA CAAAAGAGGGCGACTG GTAGATGT CAGAAGCCCTCTTTTG CCGTAAACTATAAGT TERM 6038 4339445 - 4339416 - R 80 -4.9 -5.18715 | opp_overlap 4339416, overlap 4339411 AGAAAAATAACAAAA GAGGGCGACTG GTAGATGT CAGAAGCCCTC TTTTGCCGTAAACTA Dhaf_4089 4340668 - 4339811 - | DNA-damage-inducible protein D Dhaf_4090 4341140 - 4340856 - | hypothetical protein Dhaf_4091 4342479 - 4341289 - | transposase IS4 family protein TERM 6039 4342130 - 4342144 + g 71 -8.6 -3.61715 | GGACGTTGTGCCTGT GACGAA GGT TTCGTC TTATTGCAAACAGTA Dhaf_4092 4342874 - 4342587 - | transposase TERM 6040 4342939 - 4342883 - R 80 -9 -3.98658 | gap 1, opp_overlap 4342883 ACGCCATTAAAAATA TGCTCCCCCCTATGT-GACAAGT TTTTATTATTTC ACTTGTCTACCTAGAAGGGAGCA TATCATTTCTCATAA Dhaf_4093 4343419 - 4342985 - | GCN5-related N-acetyltransferase TERM 6041 4343961 - 4343976 + G 79 -2.5 -5.40072 | TACGCCCTTTTAATA GGTGG ATTAGG CTACC TTTTTTTCCCCCAGC TERM 6042 4344313 - 4344333 + G 72 -10.3 -3.05536 | opp_overlap 4344311 CATTGGCCACTAACC GGGCGGCCC AGC GGGTAGCCC TCTTCCACGTCCTTT Dhaf_4094 4343619 - 4344533 + | Na/Pi-cotransporter II-related protein TERM 6043 4344787 - 4344811 + F 72 -7.9 -3.89822 | overlap 4344788 CTTGTTCTCATAGCC AGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCTGCGTG TERM 6044 4344788 - 4344810 + F 83 -11.4 -2.93572 | overlap 4344787 TTGTTCTCATAGCCA GTTGGAAACG TCC TGTTTCCAAC CTTTCTCCGCTGCGT TERM 6045 4345053 - 4345016 - f 100 -14.5 -4.64766 | opp_overlap 4345016 TTGACATCGTAAAAA TCTAGGATAATATAATG CCTA CTTTATATTATCCTAGA TTTTTACGAGGATGT TERM 6046 4345016 - 4345053 + F 100 -14.5 -4.57837 | opp_overlap 4345016 TTGACATCGTAAAAA TCTAGGATAATATAATG CCTA CTTTATATTATCCTAGA TTTTTACGAGGATGT TERM 6047 4345192 - 4345180 - f 100 -10.5 -4.55128 | overlap 4345182 AGGTGGAAATTAAAA GGCCG CCG CGGCC CGAAAGTGGTGGAAC TERM 6048 4345402 - 4345435 + F 87 -8.2 -4.55798 | gap 1 GACAGTATGAATTCA GGCGCATGTGTAGGG ATAAA CCCT-TGCATGCGTC TTTTAATTTCCCCTG TERM 6049 4345492 - 4345472 - f 78 -9.7 -3.53012 | CCGGGCTGCCGGAAA CGGACCC TTGAGTG GGGTCCG GTCCGGTGCCGGGCG TERM 6050 4345600 - 4345569 - f 72 -6.4 -4.33258 | gap 1, opp_overlap 4345571 4345595 4345597, overlap 4345570 4345571 AGGGCCAAAGAGAAA GGCCCGGCGG-AAGC CAT GCTGACCGCCGGGTT GAATATCAGCCTGTG TERM 6051 4345599 - 4345570 - f 74 -9.9 -3.19232 | gap 1, opp_overlap 4345571 4345595 4345597, overlap 4345569 4345571 GGGCCAAAGAGAAAG GCCCGGCGG-AAGC CAT GCTGACCGCCGGGT TGAATATCAGCCTGT TERM 6052 4345598 - 4345571 - f 91 -13.4 -2.51057 | gap 1, opp_overlap 4345571 4345595 4345597, overlap 4345570 4345569 GGCCAAAGAGAAAGG CCCGGCGG-AAGC CAT GCTGACCGCCGGG TTGAATATCAGCCTG TERM 6053 4345571 - 4345598 + F 100 -13.4 -3.12668 | gap 1, opp_overlap 4345571 4345570 4345569, overlap 4345595 4345597 GGCCAAAGAGAAAGG CCCGGCGG-AAGC CAT GCTGACCGCCGGG TTGAATATCAGCCTG TERM 6054 4345929 - 4345917 - g 71 -6.9 -4.15044 | CGGGTCTTGAATAAA CCGGC CCA GCCAG CAGCCATCTGGGACA Dhaf_4095 4345584 - 4345994 + | response regulator receiver protein TERM 6055 4346063 - 4346046 - f 71 -8.5 -3.53444 | opp_overlap 4346046 TTACCGCCTGTCAAA TTCGACA CCAG TGTCGAA TTTGACAGGCGGGGA TERM 6056 4346046 - 4346063 + F 71 -8.5 -3.53012 | opp_overlap 4346046 TTACCGCCTGTCAAA TTCGACA CCAG TGTCGAA TTTGACAGGCGGGGA TERM 6057 4346291 - 4346254 - f 95 -13.9 -2.72991 | overlap 4346264 TGACATTCGCAAGGA TTTAGGATAATATAAAA CAAA CTTTATATTATCCTAAA TCCGCGTAGGAGGAT TERM 6058 4346828 - 4346800 - g 100 -9.7 -5.41746 | overlap 4346801 AATTGCTGAAAAAAA CGATGTGCTCAAA GTC TTTGAACACATCT GGCGGGGCGGCATGC TERM 6059 4346827 - 4346801 - g 95 -13.2 -3.83963 | overlap 4346800 ATTGCTGAAAAAAAC GATGTGCTCAAA GTC TTTGAACACATC TGGCGGGGCGGCATG TERM 6060 4347032 - 4347016 - g 73 -3.5 -4.98255 | overlap 4347026 GGTGAACTACAAAAA CCTCAGC GAA GCGGCGG ACATTTCGCAGCCAA TERM 6061 4347285 - 4347299 + G 83 -11.4 -3.45134 | opp_overlap 4347265 AAAGCTACGCCTATT CCGCCT CGA AGGCGG TTATCACTTACTTCC Dhaf_4096 4346312 - 4347538 + | hypothetical protein TERM 6062 4347577 - 4347613 + T 71 -9.3 -3.04715 | opp_overlap 4347580, overlap 4347576 4347580 AAACTATTCATTAGA AAAGCACCCTGCTTGCC TTT GACTAGCAGGGTGCTGA ATTTTGGAACGGATA TERM 6063 4347610 - 4347580 - T 100 -17.6 -4.4767 | opp_overlap 4347577 4347576 4347580 CTATTCATTAGAAAA GCACCCTGCTTGCC TTT GACTAGCAGGGTGC TGAATTTTGGAACGG TERM 6064 4347580 - 4347610 + T 100 -15.4 -2.74605 | opp_overlap 4347580, overlap 4347577 4347576 CTATTCATTAGAAAA GCACCCTGCTTGCC TTT GACTAGCAGGGTGC TGAATTTTGGAACGG TERM 6065 4348143 - 4348168 + T 100 -13.4 -3.78022 | opp_overlap 4348143 GGCCTCCCTAAAAAA GTGAGACAGG ATGCCC CCTGTCTCAC TTTAATCCATATCGA TERM 6066 4348168 - 4348143 - T 100 -14.1 -5.00616 | opp_overlap 4348143 GGCCTCCCTAAAAAA GTGAGACAGGA TGCC CCCTGTCTCAC TTTAATCCATATCGA Dhaf_4097 4348656 - 4348165 - | molybdopterin-guanine dinucleotide biosynthesis protein B Dhaf_4098 4349871 - 4348657 - | molybdenum cofactor synthesis domain protein TERM 6067 4349234 - 4349249 + g 71 -10.4 -2.75819 | overlap 4349233 4349235 TTCACCTCACACCCT GCCTCC AGAA GGAGGC CTTTGAGGGTATATG Dhaf_4099 4351705 - 4349909 - | protein of unknown function DUF342 TERM 6068 4350846 - 4350834 - G 70 -7.7 -3.92005 | ATAGATAAATCCAAA TCCTG ATT CAGGA TATAAGCGGGCTCCA TERM 6069 4351052 - 4351008 - G 81 -12.2 -3.01712 | gap 1, opp_overlap 4351021 4351042 TCCTGCCCTTTAACA TTTCTCCCGGGAG-TTCCCGG CACA CCGGGAATCTTCCGGGCCAAA GCCTGCCCCGCATTG TERM 6070 4351021 - 4351038 + g 74 -11.3 -3.01712 | opp_overlap 4351008 CATTTCTCCCGGGAG TTCCCGG CACA CCGGGAA TCTTCCGGGCCAAAG Dhaf_4100 4353022 - 4351742 - | cell envelope-related transcriptional attenuator Dhaf_4101 4353299 - 4353532 + | hypothetical protein TERM 6071 4353562 - 4353589 + T 72 -10 -2.73542 | opp_overlap 4353567, overlap 4353567 AGTTACGAAAGACGG AAAAAGGAAGTC CTGC GACTTCCTTTTA TACTTCCAAGTTAGA TERM 6072 4353584 - 4353567 - T 100 -9.9 -4.77986 | opp_overlap 4353562 4353567 CGAAAGACGGAAAAA GGAAGTC CTGC GACTTCC TTTTATACTTCCAAG TERM 6073 4353567 - 4353584 + T 100 -9.9 -4.5442 | opp_overlap 4353567, overlap 4353562 CGAAAGACGGAAAAA GGAAGTC CTGC GACTTCC TTTTATACTTCCAAG Dhaf_4102 4354181 - 4353600 - | Negative regulator of genetic competence TERM 6074 4353662 - 4353678 + g 74 -10.9 -3.07816 | ATATAACTCTTCCGT GCTCTTC CAA GAAGAGC TTAGCTACATCCACC TERM 6075 4353892 - 4353902 + g 77 -8.2 -4.20288 | TCCATAACCTTGGAC CGGC TTG GCCG TTTGCTTTCCTTTTC Dhaf_4103 4355422 - 4354319 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 6076 4355198 - 4355211 + g 78 -5.9 -4.66318 | opp_overlap 4355198 GGCATCGGTTAAAAA GGGGC GGCC GCCTC TTTTCTTGACCTGAT Dhaf_4104 4355922 - 4355419 - | hypothetical protein TERM 6077 4356020 - 4356044 + r 90 -11.5 -3.64703 | opp_overlap 4356020 GGTTGTTATGCAAAA GACCGATCAAA GTA TATGATCGGTC TTTCACTAAGCAAAA TERM 6078 4356044 - 4356020 - R 100 -11.5 -4.18018 | opp_overlap 4356020 GGTTGTTATGCAAAA GACCGATCAAA GTA TATGATCGGTC TTTCACTAAGCAAAA Dhaf_4105 4356685 - 4356086 - | metal dependent phosphohydrolase TERM 6079 4356914 - 4356887 - R 86 -7 -5.00642 | overlap 4356888 4356911 GAAGGGACACAAAAA GGGCGCATCTTC CTTG GAAAATACGCCA GCTCTGGATCAAAGC TERM 6080 4356913 - 4356888 - R 82 -10.5 -3.59301 | overlap 4356887 4356911 AAGGGACACAAAAAG GGCGCATCTTC CTTG GAAAATACGCC AGCTCTGGATCAAAG Dhaf_4106 4357183 - 4356941 - | SirA family protein Dhaf_4107 4358045 - 4357173 - | nitrite and sulphite reductase 4Fe-4S region Dhaf_4108 4358465 - 4358049 - | Mov34/MPN/PAD-1 family protein Dhaf_4109 4359287 - 4358478 - | UBA/THIF-type NAD/FAD binding protein Dhaf_4110 4359544 - 4359287 - | thiamine biosynthesis protein ThiS Dhaf_4111 4361369 - 4359573 - | sulfate adenylyltransferase, large subunit TERM 6081 4360806 - 4360782 - G 72 -10.7 -2.62184 | opp_overlap 4360781 4360782 CGGCCCTTCATACCA CGCAGTGCGCT GGG AACGGACTGCG ATATTGTCTCCGTTA Dhaf_4112 4362252 - 4361371 - | phosphoadenosine phosphosulfate reductase Dhaf_4113 4363001 - 4362249 - | Phosphoadenylyl-sulfate reductase (thioredoxin) TERM 6082 4362289 - 4362305 + g 77 -4.4 -5.0133 | overlap 4362275 GGCGGGTTCAGGGAT GGATGC AGCCC GCATTC TTTTTTAGAGGGATC TERM 6083 4362704 - 4362667 - G 71 -4.1 -4.83169 | gap 1, overlap 4362669 ACCTTGTCATAAAAA GCGTTGGGGCCATATTCC GCC AGAA-ATGGCTCCAGCTC CGAATTCTCCGGCGC Dhaf_4114 4364280 - 4363060 - | ROK family protein TERM 6084 4363253 - 4363239 - G 74 -6.4 -4.3208 | overlap 4363242 GCTGAGAATGCAAAA TAAGCG GTC CGCTCA GAACCACAAGCCCCG TERM 6085 4363657 - 4363667 + g 73 -8.2 -3.85698 | CATCCCTTTGCCGCT CCCG TAA CGGG TTTCTGCCAGAACCG TERM 6086 4364069 - 4364084 + g 79 -10.4 -3.64703 | opp_overlap 4364055 ACCGGCTTCCGACCG CCGGTG GACT CACCGG TTTCCGTGGGGAGGA Dhaf_4115 4365408 - 4364335 - | sulfate ABC transporter, ATPase subunit Dhaf_4116 4366265 - 4365405 - | sulfate ABC transporter, inner membrane subunit CysW TERM 6087 4366191 - 4366176 - G 76 -2.5 -5.252 | overlap 4366184 4366187 CATGGTGATAAAAAA CAGCA AAGCAA TGCCG GTCAGCAGCCATTGA Dhaf_4117 4367128 - 4366280 - | sulfate ABC transporter, inner membrane subunit CysT TERM 6088 4366743 - 4366729 - G 71 -4.9 -4.57569 | overlap 4366730 4366731 CCAGGGGCTCAAAAA GCCGG CCGAT CCAGC CGTTAGGGGCATAAA Dhaf_4118 4368270 - 4367191 - | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 6089 4367233 - 4367220 - G 74 -9.5 -3.46936 | overlap 4367218 AAATTTGATCAAAGA CGCCG CCGT CGGCG AAATGCTCCTGCTGG TERM 6090 4368140 - 4368123 - G 90 -14.1 -3.02947 | opp_overlap 4368119 CATTGAGCAGAGATA CCGGCGG TTTG CCGCCGG CGGCTGTATCGGCAG TERM 6091 4368489 - 4368516 + r 100 -13.6 -5.39755 | gap 1, opp_overlap 4368489 TCAATATAAAAAAAA TCAGGTCGCATGA TCC TCATGCG-CCTGA TTTTTTATGCTTGTG TERM 6092 4368516 - 4368489 - R 100 -13.6 -6.10295 | gap 1, opp_overlap 4368489 TCAATATAAAAAAAA TCAGGTCGCATGA TCC TCATGCG-CCTGA TTTTTTATGCTTGTG Dhaf_4119 4369363 - 4368521 - | Lytic transglycosylase catalytic TERM 6093 4368707 - 4368696 - G 75 -3.6 -5.03747 | AAATCCTTTAAAAAA CGGG TTCC CCCA TCAAGATTCTGAGCC Dhaf_4120 4369838 - 4369383 - | CheW protein Dhaf_4121 4370612 - 4369857 - | protein of unknown function DUF1078 domain protein Dhaf_4122 4371052 - 4370651 - | flagellar basal-body rod protein FlgB TERM 6094 4370817 - 4370832 + g 80 -4.7 -5.03314 | opp_overlap 4370828 TCTTGCACAACCCCA CTGGA ATTAAA TCCAG TTTTTTGGAGATGAC Dhaf_4123 4372047 - 4371058 - | protein of unknown function DUF1078 domain protein TERM 6095 4372121 - 4372084 - R 100 -11.4 -4.18763 | opp_overlap 4372079, overlap 4372075 AAGAAATGCCGAAAA GGACTTTGGCATAAGG TTTTAC CCTTATACCCAAGCCC TTAGCCTATTATCCG Dhaf_4124 4373410 - 4372130 - | protein of unknown function DUF1078 domain protein TERM 6096 4373219 - 4373260 + g 73 -8.6 -3.89412 | CAGGCCGACCTGTGC GGGGTTGGTTCCCCCTTG ATTCGC TGAGGGCGATCCGGCCCC TTTCATAGTTTGGCT Dhaf_4125 4374020 - 4373466 - | flagellar hook capping protein TERM 6097 4373938 - 4373959 + g 80 -7.3 -4.51765 | gap 1 CCCAGAACCTCTTTT GTAGCGTCAG AGA CTG-CGCTGC TTTGTTTGGATTCTG Dhaf_4126 4375655 - 4374030 - | flagellar hook-length control protein TERM 6098 4374823 - 4374848 + g 76 -9.8 -3.6715 | TCTAATCCAGTCTCA TCTGATCCTG TTCCAT CGGGATCAGA TTTCGACTTACCTAA TERM 6099 4375076 - 4375100 + g 71 -9.4 -3.4489 | gap 1, opp_overlap 4375090, overlap 4375099 CAAGTTCTGATTTCT GCTG-GGCTAA AGGA TTAGCCTCAGC TTGATTCTGGGGCTT Dhaf_4127 4376524 - 4375778 - | RNA polymerase, sigma 28 subunit, FliA/WhiG Dhaf_4128 4376935 - 4376552 - | hypothetical protein Dhaf_4129 4377421 - 4376939 - | CheD Dhaf_4130 4378014 - 4377418 - | CheC, inhibitor of MCP methylation Dhaf_4131 4378661 - 4378017 - | type IV pilus assembly PilZ TERM 6100 4378076 - 4378061 - G 78 -5.4 -4.87626 | overlap 4378041 TTTGAATATCAAAAA CACATC GGAT GATGCG ATCGCGATCACGTTC Dhaf_4132 4379593 - 4378709 - | Cobyrinic acid ac-diamide synthase TERM 6101 4378794 - 4378780 - G 75 -7.8 -4.23674 | GCGGACTAAGATAAA GTCCGG ACA CCGAAC CGGCAATCCATTGGA Dhaf_4133 4380824 - 4379586 - | GTP-binding signal recognition particle SRP54 G- domain protein Dhaf_4134 4382880 - 4380814 - | flagellar biosynthesis protein FlhA TERM 6102 4380900 - 4380924 + g 73 -7.1 -4.30416 | opp_overlap 4380897 4380898, overlap 4380901 ATAGAACCATAAGCT GGGGCAACTGA CGC TCAGTTACCCG TTTTAGATTAATCCT TERM 6103 4380901 - 4380923 + g 73 -10.6 -3.17526 | opp_overlap 4380897 4380898, overlap 4380900 TAGAACCATAAGCTG GGGCAACTGA CGC TCAGTTACCC GTTTTAGATTAATCC TERM 6104 4382709 - 4382693 - G 75 -5.1 -4.7078 | overlap 4382694 4382700 GGAAGCACTGAAAAA TCCAAAG GGT CTTTGGT AAAGACTGAGATCAT Dhaf_4135 4383951 - 4382899 - | flagellar biosynthetic protein FlhB TERM 6105 4383217 - 4383227 + g 73 -2.4 -5.04377 | CATCATGCGGCGCAT GGAC ATA GCCC TTTGTTTTCTTTTAA TERM 6106 4383858 - 4383878 + g 72 -10.5 -3.02511 | opp_overlap 4383849 4383858 AACTGACCAGCATAA GTGCGGAAA CCA TTTCCGTAC TCTTAAAAACCTGGC Dhaf_4136 4384730 - 4383948 - | flagellar biosynthetic protein FliR Dhaf_4138 4385819 - 4385040 - | flagellar biosynthetic protein FliP Dhaf_4139 4386313 - 4385816 - | hypothetical protein TERM 6107 4386203 - 4386191 - G 75 -7.7 -4.15864 | overlap 4386193 CAGAATAAGGAGAAA GACGA GAA TCGTC CCGATGATCCCCCCC Dhaf_4140 4386677 - 4386315 - | response regulator receiver protein TERM 6108 4386952 - 4386901 - H 89 -11.7 -3.54424 | gap 1, opp_overlap 4386914 TTCGACTTGTCCAAA GCCTGTTGGGAAAGCTCTTTTAGG ACAGA CCCCAAAGGGCTTTTCCA-CAGGC TGGCACTGTCCACAG TERM 6109 4388134 - 4388119 - g 73 -3.3 -4.9138 | AGCAGGTAAAGAAAA TCGAT AAGGCA ATCGA AGCAGAAATCAGGCA Dhaf_4141 4387317 - 4388564 + | transposase IS116/IS110/IS902 family protein Dhaf_4142 4390003 - 4388750 - | CheC, inhibitor of MCP methylation / FliN fusion protein Dhaf_4143 4390991 - 4389996 - | flagellar motor switch protein FliM Dhaf_4144 4391525 - 4391097 - | flagellar basal body-associated protein FliL Dhaf_4145 4391737 - 4391510 - | flagellar FlbD family protein Dhaf_4146 4392177 - 4391734 - | hypothetical protein Dhaf_4147 4393497 - 4392196 - | Peptidase C14, ICE, catalytic subunit p20, active site Dhaf_4148 4394350 - 4393481 - | flagellar assembly protein FliH Dhaf_4149 4395338 - 4394334 - | flagellar motor switch protein FliG Dhaf_4150 4396953 - 4395340 - | flagellar M-ring protein FliF TERM 6110 4395449 - 4395460 + g 75 -5.8 -4.63486 | CGCTGGATTTCTTCA GCAG ATTT CTGC TTTTGTTGGGCAAGT Dhaf_4151 4397424 - 4397080 - | flagellar hook-basal body complex subunit FliE TERM 6111 4397358 - 4397374 + g 91 -9.5 -4.64334 | CAACAGGGTTATTTT CCTGAAT GGG ATTCAGG TTTTGTTGAAGCATT Dhaf_4152 4397962 - 4397432 - | flagellar basal-body rod protein FlgC Dhaf_4153 4399146 - 4397968 - | response regulator receiver modulated CheB methylesterase Dhaf_4154 4399576 - 4399133 - | CheW protein Dhaf_4155 4401831 - 4399642 - | CheA signal transduction histidine kinase Dhaf_4156 4402158 - 4402066 - | hypothetical protein TERM 6112 4402208 - 4402180 - R 79 -6.8 -4.72272 | opp_overlap 4402185, overlap 4402185 TTCTCCCAGGAAAAA TAAAACACTCCG ATAAG CGAAGTGTTTTT TGACTCAAGAGGCTC TERM 6113 4402203 - 4402185 - R 89 -6.7 -5.3104 | opp_overlap 4402185, overlap 4402180 CCAGGAAAAATAAAA CACTCCG ATAAG CGAAGTG TTTTTTGACTCAAGA TERM 6114 4402185 - 4402203 + r 80 -4.5 -5.08824 | opp_overlap 4402185 4402180 CCAGGAAAAATAAAA CACTCCG ATAAG CGAAGTG TTTTTTGACTCAAGA Dhaf_4157 4402911 - 4402306 - | hypothetical protein Dhaf_4158 4403122 - 4404168 + | metal dependent phosphohydrolase TERM 6115 4406090 - 4406104 + G 75 -5.7 -4.5032 | TTGAAAACAGCACTA CGTCA GTTAA TGACG TTTGTTCTTAATCTA Dhaf_4159 4404878 - 4406230 + | transposase IS4 family protein Dhaf_4160 4407181 - 4406201 - | putative cell wall binding repeat 2-containing protein TERM 6116 4406888 - 4406898 + g 78 -5.4 -4.94168 | opp_overlap 4406888 ATTTTTAACATTTAA CCTT ATT AAGG TTTGTTTTGTTGTAT TERM 6117 4407258 - 4407216 - R 100 -12.9 -4.39002 | gap 1, opp_overlap 4407219, overlap 4407204 4407217 4407219 AAAGCTTGTACAAAA GCACTGCCTCAATCCTTTGG TCAA CCAA-GGATTGAGGCAGTTA TCATCAATGGATCCT TERM 6118 4407257 - 4407217 - R 100 -16.4 -3.22678 | gap 1, opp_overlap 4407219, overlap 4407216 4407219 AAGCTTGTACAAAAG CACTGCCTCAATCCTTTGG TCAA CCAA-GGATTGAGGCAGTT ATCATCAATGGATCC TERM 6119 4407219 - 4407255 + r 100 -19 -3.42699 | gap 1, opp_overlap 4407217 4407216 4407219 GCTTGTACAAAAGCA CTGCCTCAATCCTTTGG TCAA CCAA-GGATTGAGGCAG TTATCATCAATGGAT TERM 6120 4407255 - 4407219 - R 100 -19 -3.1733 | gap 1, opp_overlap 4407219, overlap 4407217 4407216 GCTTGTACAAAAGCA CTGCCTCAATCCTTTGG TCAA CCAA-GGATTGAGGCAG TTATCATCAATGGAT Dhaf_4161 4407651 - 4407274 - | flagellar protein FlaG protein Dhaf_4162 4408023 - 4407691 - | hypothetical protein Dhaf_4163 4408450 - 4408016 - | HEPN domain protein TERM 6121 4408431 - 4408419 - G 81 -3.3 -5.44119 | GCGAGTTCAAAAAAA CTGCC AAC GTCAG GGTCATTAGGCCGCT Dhaf_4164 4408778 - 4408437 - | DNA polymerase beta domain protein region Dhaf_4165 4409261 - 4408869 - | flagellar protein FliS TERM 6122 4408953 - 4408973 + g 85 -5.3 -5.27779 | overlap 4408955 CAGGATCTCTTTAGC GTTGCGCAG CTG CTGCACATC TTTTTTAATATTGCC TERM 6123 4408955 - 4408971 + g 71 -6.5 -4.26398 | overlap 4408953 GGATCTCTTTAGCGT TGCGCAG CTG CTGCACA TCTTTTTTAATATTG Dhaf_4166 4410808 - 4409276 - | flagellar hook-associated 2 domain protein TERM 6124 4410086 - 4410097 + g 75 -5.8 -4.49337 | ATCCAACACAACCTC GGCA TCCT TGCC TTTTATGGCTTCTGA TERM 6125 4411010 - 4410953 - R 100 -14.3 -3.62591 | opp_overlap 4410955 4410956, overlap 4410955 4410958 4411003 4411004 CCTATAATTTTGAAA TATTACTGTTCTGTCCAGAATGCGACA ACGT TGTCGCATTCTGGACAGAACCCAAGTT CCTTAGAAATGCCGC TERM 6126 4411007 - 4410955 - R 100 -21 -3.39028 | gap 1, opp_overlap 4410955 4410956, overlap 4410953 4410958 4411003 4411004 TATAATTTTGAAATA TTACTGTTCTGTCCAGAATGCGACA ACGT TGTCGCATTCTGGACAGAACC-CAA GTTCCTTAGAAATGC TERM 6127 4410955 - 4411008 + r 100 -19.1 -3.34895 | opp_overlap 4410955 4410953 4410958 4411003 4411004, overlap 4410956 TATAATTTTGAAATA TTACTGTTCTGTCCAGAATGCGACA ACGT TGTCGCATTCTGGACAGAACCCAAG TTCCTTAGAAATGCC TERM 6128 4410956 - 4411007 + r 100 -20.4 -2.60723 | opp_overlap 4410955 4410953 4410958 4411003 4411004, overlap 4410955 ATAATTTTGAAATAT TACTGTTCTGTCCAGAATGCGACA ACGT TGTCGCATTCTGGACAGAACCCAA GTTCCTTAGAAATGC TERM 6129 4411005 - 4410958 - R 100 -23 -2.85069 | opp_overlap 4410956 4410955, overlap 4410955 4410953 4411003 4411004 AATTTTGAAATATTA CTGTTCTGTCCAGAATGCGACA ACGT TGTCGCATTCTGGACAGAACCC AAGTTCCTTAGAAAT Dhaf_4167 4414162 - 4411208 - | flagellin domain protein TERM 6130 4413695 - 4413726 + g 85 -5.8 -5.09245 | gap 1, opp_overlap 4413694, overlap 4413694 ATATTGACGAATCAG CGT-ATCTCCCGGCA ATA TTCCGGGAGTTGGCG TTTTTGTGCTTTTAA TERM 6131 4414064 - 4414096 + g 100 -13.6 -4.23853 | gap 2, opp_overlap 4414075 ATGATTGATTCTTAA GCCGGACGACACCCTT GCT AAGGGTGT-G-CCGGC TTTGTGTATATTCTT Dhaf_4168 4414402 - 4414220 - | hypothetical protein Dhaf_4169 4414602 - 4414423 - | hypothetical protein TERM 6132 4414793 - 4414763 - H 79 -11.1 -3.10474 | opp_overlap 4414761 4414764, overlap 4414766 GAGAATATTTGAACA TCACCCTCCGCCC CTTAT GAGCGGAGGGTAG TCGTTATTGGCTAGC TERM 6133 4414764 - 4414793 + H 73 -10 -2.94872 | gap 1, opp_overlap 4414763 4414766, overlap 4414761 AGAATATTTGAACAT C-ACCCTCCGCCC CTTAT GAGCGGAGGGTAG TCGTTATTGGCTAGC TERM 6134 4414790 - 4414766 - H 100 -15 -2.75818 | opp_overlap 4414764 4414761, overlap 4414763 AATATTTGAACATCA CCCTCCGCCC CTTAT GAGCGGAGGG TAGTCGTTATTGGCT Dhaf_4170 4414800 - 4414940 + | hypothetical protein Dhaf_4171 4415843 - 4415307 - | dTDP-4-dehydrorhamnose 3,5-epimerase Dhaf_4172 4416917 - 4415901 - | Radical SAM domain protein TERM 6135 4416682 - 4416694 + g 71 -6.3 -4.16016 | AACAGCTTATACGGA GCAAA CGC TTTGC TTTGTTCAACAATCA Dhaf_4173 4418112 - 4417078 - | Radical SAM domain protein Dhaf_4174 4419266 - 4418109 - | methyltransferase FkbM family Dhaf_4175 4420311 - 4419283 - | Radical SAM domain protein TERM 6136 4419413 - 4419429 + g 82 -5.1 -5.0538 | TTTCGCAGATTGGTA CGGAGCA TAC TGTTTCG TTTTTTCCCATCCCA Dhaf_4176 4421375 - 4420314 - | glycosyl transferase group 1 Dhaf_4177 4423614 - 4421455 - | HAD superfamily hydrolase-like protein TERM 6137 4422560 - 4422583 + g 73 -8.2 -3.79519 | ACACAGTCATTGATG CTCTGTGCTT TAAC GAGTACAGAG TTTAATACTGACATT Dhaf_4178 4424951 - 4423629 - | Radical SAM domain protein TERM 6138 4424287 - 4424301 + g 71 -4.2 -4.71426 | AATACCGTAGCTTTT TCCACA AAA TGCGGA TTTTCTTGGTACGGA Dhaf_4179 4426167 - 4424974 - | methyltransferase FkbM family Dhaf_4180 4427763 - 4426243 - | glycosyl transferase family 2 TERM 6139 4427377 - 4427391 + g 71 -4.4 -4.67641 | opp_overlap 4427367 4427377 4427379, overlap 4427367 ATAAATATCATTAGA TATATT GAC AATATA TTTTCCTTTTAGAAT Dhaf_4181 4429274 - 4427952 - | hypothetical protein TERM 6140 4428423 - 4428435 + g 80 -4.1 -5.26875 | AAATAGATTGGGCAA TTTGC TAA GCAGA TTTTTTAATTCAAAA TERM 6141 4428886 - 4428912 + g 81 -5.8 -4.85599 | opp_overlap 4428886 4428884 4428889 4428891, overlap 4428889 4428891 GGCAATTCCAGAATA TTACACGAACCA AAC TGGTTCGCGTTG TTTTTGTAAAATGAA TERM 6142 4428889 - 4428909 + g 91 -9.7 -4.53475 | opp_overlap 4428889 4428886 4428884 4428891, overlap 4428886 4428891 AATTCCAGAATATTA CACGAACCA AAC TGGTTCGCG TTGTTTTTGTAAAAT TERM 6143 4428909 - 4428889 - G 76 -11.9 -2.80817 | opp_overlap 4428886 4428889 4428891, overlap 4428886 4428884 4428891 AATTCCAGAATATTA CACGAACCA AAC TGGTTCGCG TTGTTTTTGTAAAAT TERM 6144 4428907 - 4428891 - G 74 -10.9 -2.94726 | opp_overlap 4428889 4428886 4428891, overlap 4428889 4428886 4428884 TTCCAGAATATTACA CGAACCA AAC TGGTTCG CGTTGTTTTTGTAAA TERM 6145 4428891 - 4428907 + g 72 -10.9 -2.57877 | opp_overlap 4428891 4428889 4428886 4428884, overlap 4428889 4428886 TTCCAGAATATTACA CGAACCA AAC TGGTTCG CGTTGTTTTTGTAAA Dhaf_4182 4430415 - 4429312 - | Radical SAM domain protein Dhaf_4183 4431447 - 4430560 - | NAD-dependent epimerase/dehydratase Dhaf_4184 4432269 - 4431517 - | Cephalosporin hydroxylase TERM 6146 4432539 - 4432557 + r 78 -5.3 -5.04175 | opp_overlap 4432518 GCAAAGTCGCTTCAT GAAGCTG CCTGA CAGTTTC TTTTTCTATCCTTCC Dhaf_4186 4434585 - 4433056 - | hypothetical protein TERM 6147 4433143 - 4433118 - G 88 -8.3 -4.90296 | opp_overlap 4433121 4433125 AAAATTGGACAAAAA GAACTCTGAGC TTGC GCTCTAAGTTC ATGATAAAGAATTGC TERM 6148 4434901 - 4434885 - R 70 -9.4 -2.73771 | overlap 4434884 TTATAGGTTCTAAAT GCTGCC ATCAA GGCAGC CTCATCGCGAACATC Dhaf_4187 4435895 - 4435119 - | glucose-1-phosphate cytidylyltransferase TERM 6149 4435573 - 4435594 + g 86 -13.7 -3.03771 | CGTTTAAGCCGGCCG CCGGTCTGG GTAT CCAGGCCGG TATTAGCCAGTGTGA Dhaf_4188 4437856 - 4435922 - | glycosyl transferase family 2 TERM 6150 4436788 - 4436802 + g 77 -2.8 -5.30575 | opp_overlap 4436779, overlap 4436781 4436789 GCAAAAGTTTGCGTA AGCAAT CAT ATTGCA TTTTTTCCATTTTTA TERM 6151 4437635 - 4437625 - G 83 -4 -5.47218 | CCGCATCTAAAAAAA TGAT CCA ATCA CCCTTTGCCCGATCT TERM 6152 4437908 - 4437884 - R 95 -11.5 -3.84406 | overlap 4437866 CTTTCATTACAAGAA GAGGCCAGA TGAAAAC TCTGGCCTC TAAAGGTTTGCCTAA Dhaf_4189 4439084 - 4437927 - | flagellin domain protein TERM 6153 4438245 - 4438255 + g 79 -2.4 -5.42265 | TTTGCCATCCGTACC ACGG ACT CCGA TTTTTTCTGCTTTCA TERM 6154 4439109 - 4439131 + r 88 -9.9 -4.21194 | gap 1, overlap 4439112 CCTCCTTGATTTGGA TGC-CGGGCA TCCT TGCCCGTGCA TTTTCAATAGTGCGG TERM 6155 4439112 - 4439127 + r 75 -10.4 -2.76671 | overlap 4439109 CCTTGATTTGGATGC CGGGCA TCCT TGCCCG TGCATTTTCAATAGT Dhaf_4190 4439741 - 4439337 - | flagellar protein FlaG protein TERM 6156 4439802 - 4439853 + r 100 -26.2 -5.21709 | opp_overlap 4439804 4439806, overlap 4439804 4439806 CGGCAAAACAAGAAC AATACTTAAGAGGGGAATTCCGGC AATC GCCGGAATTCCCCTCTTAAGTCTA TTTTTTGATATGAAA TERM 6157 4439851 - 4439804 - R 100 -28.8 -4.20953 | opp_overlap 4439802 4439804 4439806, overlap 4439806 GCAAAACAAGAACAA TACTTAAGAGGGGAATTCCGGC AATC GCCGGAATTCCCCTCTTAAGTC TATTTTTTGATATGA TERM 6158 4439804 - 4439851 + r 100 -28.8 -4.23988 | opp_overlap 4439804 4439806, overlap 4439802 4439806 GCAAAACAAGAACAA TACTTAAGAGGGGAATTCCGGC AATC GCCGGAATTCCCCTCTTAAGTC TATTTTTTGATATGA TERM 6159 4439806 - 4439849 + r 100 -31.4 -3.7035 | opp_overlap 4439804 4439806, overlap 4439804 4439802 AAAACAAGAACAATA CTTAAGAGGGGAATTCCGGC AATC GCCGGAATTCCCCTCTTAAG TCTATTTTTTGATAT TERM 6160 4439849 - 4439806 - R 100 -31.4 -3.67411 | opp_overlap 4439806 4439804 4439802, overlap 4439804 AAAACAAGAACAATA CTTAAGAGGGGAATTCCGGC AATC GCCGGAATTCCCCTCTTAAG TCTATTTTTTGATAT Dhaf_4191 4440084 - 4439851 - | carbon storage regulator, CsrA Dhaf_4192 4440544 - 4440086 - | protein of unknown function DUF180 TERM 6161 4440466 - 4440446 - G 100 -14.1 -4.02132 | overlap 4440465 GGGCAAATGGACAAA GGCTTTCTC GTC GAGAAAGCC TGGAATGCCATGGGG Dhaf_4193 4441107 - 4440556 - | hypothetical protein Dhaf_4194 4442176 - 4441193 - | flagellar hook-associated protein 3 TERM 6162 4442034 - 4442070 + g 91 -7.2 -5.26316 | opp_overlap 4442025 4442034, overlap 4442038 TTAAAACGCAGAGAA TTCTCCGTCCCTACGG GATCG TCGGAGGGACGGTTAA TTTTTTGTCCAGTGG TERM 6163 4442038 - 4442066 + g 95 -12.4 -3.99236 | opp_overlap 4442025 4442034, overlap 4442034 AACGCAGAGAATTCT CCGTCCCTACGG GATCG TCGGAGGGACGG TTAATTTTTTGTCCA TERM 6164 4442076 - 4442088 + g 73 -7.7 -4.00526 | GGACGGTTAATTTTT TGTCC AGT GGACA TTTGATTCTGCAGTT Dhaf_4195 4443953 - 4442202 - | flagellar hook-associated protein FlgK TERM 6165 4442750 - 4442775 + g 81 -9.8 -3.96506 | opp_overlap 4442750 4442749, overlap 4442745 CAAGAGAACTAAGAG CTTTGGCGAT TTCTCC ATCGCCGAAG TTATCTTTTCCGGTA TERM 6166 4443186 - 4443212 + g 81 -5.8 -4.86621 | overlap 4443187 4443188 CTGATAAGCCTTGGT ATCATCGACCAG GAT CTGGTTGGTGGC TTTTTCATTGCCGAT TERM 6167 4443187 - 4443211 + g 71 -9.3 -3.5125 | overlap 4443186 4443188 TGATAAGCCTTGGTA TCATCGACCAG GAT CTGGTTGGTGG CTTTTTCATTGCCGA Dhaf_4196 4444445 - 4443966 - | FlgN family protein Dhaf_4197 4444747 - 4444472 - | Anti-sigma-28 factor FlgM family protein TERM 6168 4444984 - 4444935 - R 100 -31.3 -3.96327 | opp_overlap 4444951 ACTCCCGACCATAAA TCGGATATGCTCCAAATTACCAA CCGG TTGGTAATTTGGAGCATATCCGA TAGAACAGCATCGTG TERM 6169 4445020 - 4445047 + r 71 -8.6 -3.53012 | opp_overlap 4445013 4445025, overlap 4445025 CAAGCTAAGGATGTA CCAAATTCGAAA CCGG TTTCGAATTTAG TTTCACCCCAAGAAA TERM 6170 4445025 - 4445042 + r 72 -7.1 -4.05788 | opp_overlap 4445025 4445013, overlap 4445020 TAAGGATGTACCAAA TTCGAAA CCGG TTTCGAA TTTAGTTTCACCCCA TERM 6171 4445042 - 4445025 - R 70 -7.1 -3.7791 | opp_overlap 4445020 4445025, overlap 4445013 TAAGGATGTACCAAA TTCGAAA CCGG TTTCGAA TTTAGTTTCACCCCA TERM 6172 4445097 - 4445063 - R 100 -15.1 -4.1822 | opp_overlap 4445063 TTTCACCCCAAGAAA CGCCCTGATCTAACT ATAAA AGTGAGACCAGGGCG TTTTTCATTAAAGGG TERM 6173 4445063 - 4445097 + r 100 -12.9 -4.8622 | opp_overlap 4445063 TTTCACCCCAAGAAA CGCCCTGATCTAACT ATAAA AGTGAGACCAGGGCG TTTTTCATTAAAGGG Dhaf_4198 4445728 - 4445105 - | protein of unknown function DUF820 Dhaf_4199 4445948 - 4446721 + | MotA/TolQ/ExbB proton channel TERM 6174 4447545 - 4447599 + G 79 -11.5 -3.17392 | gap 2, opp_overlap 4447545 CCAAATATGACTTAA CGGAGCCCGGACAGTCCCTGGAAGCCG ATC CGACTTC-AGGAACT-TCCGCACTCCG TTAACTTAGCGAATG TERM 6175 4447599 - 4447545 - g 100 -18.1 -3.1489 | gap 2, opp_overlap 4447545 CCAAATATGACTTAA CGGAGCCCGGACAGTCCCTGGAAGCCG ATC CGACTT-CAGGAACT-TCCGCACTCCG TTAACTTAGCGAATG Dhaf_4200 4446776 - 4447603 + | OmpA/MotB domain protein Dhaf_4201 4448679 - 4447639 - | peptidase M28 Dhaf_4202 4448719 - 4449156 + | protein of unknown function DUF327 TERM 6176 4449544 - 4449492 - g 76 -7.4 -4.32201 | gap 2, overlap 4449507 CCAACCAATGGAAAA CTTTAAGAGAAGTGATTCTTCCCAAG CTG CTTGAAAAGAAA-ACTCC-CTTAAAG ATCTGGAGTGCGGGG Dhaf_4203 4449239 - 4450033 + | MCP methyltransferase, CheR-type TERM 6177 4450059 - 4450109 + F 100 -9.9 -4.57569 | gap 1, overlap 4450060 4450108 ATATTTTTGCCATCT ACCCCTGTGTCA-TCGGAAAAGGA AGAT TCTTTTTCGGAGTAACACAGGGGA TTTTTAAAAGAATCG TERM 6178 4450060 - 4450108 + F 100 -13.4 -3.3422 | gap 1, overlap 4450059 TATTTTTGCCATCTA CCCCTGTGTCA-TCGGAAAAGGA AGAT TCTTTTTCGGAGTAACACAGGGG ATTTTTAAAAGAATC TERM 6179 4450376 - 4450391 + G 75 -6.2 -4.62069 | TATGTCCAAGACCCT GATAAC AATC GTTATC TTTTTCAGCTGACAG Dhaf_4204 4450331 - 4450630 + | hypothetical protein TERM 6180 4450671 - 4450710 + T 100 -13.9 -4.21465 | gap 1, opp_overlap 4450682, overlap 4450673 4450682 ATGCGCCTTTTGATT TG-CACGAAAAAGGGACT TTTGC AGTCCCTTTTTTGTGTCA TTATTTAATTTTAGC TERM 6181 4450673 - 4450707 + T 100 -16.7 -3.09766 | opp_overlap 4450682, overlap 4450671 4450682 GCGCCTTTTGATTTG CACGAAAAAGGGACT TTTGC AGTCCCTTTTTTGTG TCATTATTTAATTTT TERM 6182 4450682 - 4450698 + T 100 -8 -5.42131 | opp_overlap 4450682, overlap 4450673 4450671 GATTTGCACGAAAAA GGGACT TTTGC AGTCCC TTTTTTGTGTCATTA TERM 6183 4450698 - 4450682 - T 86 -8 -4.72986 | opp_overlap 4450682 4450673 4450671 GATTTGCACGAAAAA GGGACT TTTGC AGTCCC TTTTTTGTGTCATTA Dhaf_4205 4451005 - 4450739 - | hypothetical protein Dhaf_4206 4452635 - 4451079 - | citrate lyase, alpha subunit TERM 6184 4451858 - 4451870 + g 74 -9.1 -3.73775 | TTTTGGCAATCCGCA GACCC ACA GGGTC TTTGGTCACAGTAAG Dhaf_4207 4453421 - 4452717 - | Citryl-CoA lyase Dhaf_4208 4453775 - 4453491 - | citrate lyase acyl carrier protein Dhaf_4209 4454028 - 4454315 + | hypothetical protein Dhaf_4210 4454396 - 4454767 + | protein of unknown function DUF1694 TERM 6185 4454774 - 4454813 + T 100 -10 -4.59081 | opp_overlap 4454775, overlap 4454775 GTTGAGTAAAAATAA AGGGACGGTTCAAAGC AAAAACAC GCTTTGGTCCGTCCCC TTTTATCTCAATTTA TERM 6186 4454812 - 4454775 - T 100 -12 -4.91852 | opp_overlap 4454774 4454775 TTGAGTAAAAATAAA GGGACGGTTCAAAGCA AAAACA CGCTTTGGTCCGTCCC CTTTTATCTCAATTT TERM 6187 4454775 - 4454812 + T 100 -13.5 -3.34364 | opp_overlap 4454775, overlap 4454774 TTGAGTAAAAATAAA GGGACGGTTCAAAGC AAAAACAC GCTTTGGTCCGTCCC CTTTTATCTCAATTT Dhaf_4211 4455242 - 4454862 - | hypothetical protein Dhaf_4212 4456483 - 4455353 - | Alcohol dehydrogenase GroES domain protein TERM 6188 4455569 - 4455558 - G 76 -2.2 -5.24129 | TTTCGGGAGAAAAAA TCCC CCAA AGGA AACAGATTATACTTT TERM 6189 4456667 - 4456629 - R 100 -25.6 -4.64598 | opp_overlap 4456631 4456635, overlap 4456617 TAACTATCTGAAAAA TAGCAAGAGGGTTGCCGT AGT ACGACAACCCTCTTGCTA TGCTAAACATGAGCC TERM 6190 4456631 - 4456665 + r 100 -21.6 -2.79183 | opp_overlap 4456629, overlap 4456635 ACTATCTGAAAAATA GCAAGAGGGTTGCCGT AGT ACGACAACCCTCTTGC TATGCTAAACATGAG TERM 6191 4456635 - 4456661 + r 100 -15.2 -3.29471 | opp_overlap 4456629, overlap 4456631 TCTGAAAAATAGCAA GAGGGTTGCCGT AGT ACGACAACCCTC TTGCTATGCTAAACA Dhaf_4213 4457326 - 4457168 - | hypothetical protein TERM 6192 4457640 - 4457615 - R 100 -9.1 -5.21709 | CTCCACAGTAAAAAA GGCACTCCTAT TATA ATAGAAATGCC GCTGTACCCTCTAAC Dhaf_4214 4458817 - 4457651 - | protein of unknown function DUF34 Dhaf_4215 4459593 - 4458796 - | protein of unknown function DUF633 TERM 6193 4459683 - 4459657 - R 100 -11.7 -4.99035 | opp_overlap 4459656 4459655 4459659 TCACTCATAGAAAAA TAGCGAGATGC TTCAT ACATCTCGCTA CGTTCGTTCTTAAGT TERM 6194 4460035 - 4460047 + r 80 -2.7 -5.45652 | TATTAGCTAGTCAAG CTTAA TAT TTGAG TTTTTTATTCCAGGT Dhaf_4216 4461170 - 4460052 - | RNA polymerase, sigma 70 subunit, RpoD subfamily TERM 6195 4461096 - 4461107 + g 83 -4.4 -5.52096 | CATGATCTCCCGGTA GGTT AAAG AACC TTTTTTCTTGCCTTT Dhaf_4217 4463061 - 4461217 - | DNA primase Dhaf_4218 4463424 - 4464011 + | spore germination protein-like protein TERM 6196 4464026 - 4464067 + T 100 -15.3 -4.72986 | gap 1, opp_overlap 4464027 4464029 4464040, overlap 4464027 ACATTCGTATTTAAG AGAGTGCCGCCAAACTACTT TTC AAGTAGTG-GGCGGCACTCC TTTTTGCTGGCACTA TERM 6197 4464066 - 4464027 - T 100 -18.8 -3.08996 | gap 1, opp_overlap 4464026 4464027, overlap 4464029 4464040 CATTCGTATTTAAGA GAGTGCCGCCAAACTACTT TTC AAGTAGTG-GGCGGCACTC CTTTTTGCTGGCACT TERM 6198 4464027 - 4464066 + T 100 -18.8 -3.4331 | gap 1, opp_overlap 4464027 4464029 4464040, overlap 4464026 CATTCGTATTTAAGA GAGTGCCGCCAAACTACTT TTC AAGTAGTG-GGCGGCACTC CTTTTTGCTGGCACT TERM 6199 4464064 - 4464029 - T 100 -15.6 -3.10344 | gap 1, opp_overlap 4464027 4464026, overlap 4464027 4464040 TTCGTATTTAAGAGA GTGCCGCCAAACTACTT TTC AAGTAGTG-GGCGGCAC TCCTTTTTGCTGGCA TERM 6200 4464110 - 4464088 - T 100 -9.2 -5.14563 | opp_overlap 4464087 GCTGGCACTAAAAAA GGTCTGTC TTTTGGC GACAGACC CTGGATTATTTCGGC Dhaf_4219 4465124 - 4464135 - | deoxyguanosinetriphosphate triphosphohydrolase Dhaf_4220 4466642 - 4465200 - | FMN-binding domain protein TERM 6201 4466084 - 4466104 + g 76 -8.3 -4.07885 | opp_overlap 4466064 GCAGGACAAGCCCAT CCTGCCATT GAA AATGGAAGG TTTTCAGACGGGGTA Dhaf_4221 4467790 - 4466639 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 6202 4467299 - 4467315 + g 79 -10.9 -3.53343 | ATGACCGGAAGCTTC CAGCCAT TCC ATGGCTG TTTCCAGGGCAAATT Dhaf_4222 4468546 - 4467860 - | hypothetical protein TERM 6203 4468290 - 4468273 - G 71 -4 -4.77036 | opp_overlap 4468273, overlap 4468275 TCGGATCATCAAAAA GCCGGG TATATT CCCGCC TCATCTGAATGAGGA TERM 6204 4468944 - 4468910 - R 100 -15.1 -5.28176 | opp_overlap 4468910 TCTAGGCACAAAAAA GATCTCCCCTGCGCT TTTTG AGCGAAGAGGAGATC TTTAGAAATTACATC TERM 6205 4468910 - 4468944 + r 100 -13.6 -3.61268 | opp_overlap 4468910 TCTAGGCACAAAAAA GATCTCCCCTGCGCTT TTT GAGCGAAGAGGAGATC TTTAGAAATTACATC Dhaf_4223 4470179 - 4468986 - | aminotransferase class I and II TERM 6206 4469748 - 4469771 + g 73 -4.5 -4.68601 | opp_overlap 4469750, overlap 4469750 4469752 TTCTTCATCTAAGAG CAGGGGGTT TTCAAT AACCCTCCG TTTGTTCTTTTGGAT Dhaf_4224 4471496 - 4470321 - | amidohydrolase TERM 6207 4470577 - 4470595 + g 85 -9.6 -4.3208 | overlap 4470570 4470560 ATCAACCGGATCATC CCTTGATC ATT GATCAGGG TTTTCACTTCTGAGC TERM 6208 4471745 - 4471700 - R 100 -10.5 -5.626 | gap 1, opp_overlap 4471700 TATTGTATAAAAAAA CGCTGAAGGCTCGCAAAAAACA TAG CGTT-TATGCGGGCTTTCAGCG TTTTACATATTTTCC TERM 6209 4471700 - 4471745 + r 100 -14.9 -4.35581 | opp_overlap 4471700 TATTGTATAAAAAAA CGCTGAAGGCTCGCAAAAA ACATAGCG TTTATGCGGGCTTTCAGCG TTTTACATATTTTCC Dhaf_4225 4472936 - 4471767 - | Polysulphide reductase NrfD Dhaf_4226 4473570 - 4472950 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_4227 4476036 - 4473583 - | molybdopterin oxidoreductase TERM 6210 4475245 - 4475283 + g 71 -3.8 -4.68424 | CGCTTTGGCCGCTAA GGCGTTGAAATTGGGATC AAT GACCACGATTTTAGCACC TTTTTCCCTGGCTTC TERM 6211 4476186 - 4476215 + H 93 -12.4 -3.08464 | opp_overlap 4476177 4476191, overlap 4476191 ATACAAGTTTCTGTA GCAAATGATACA TCCTTT TGTATCATTTGC TTCAATACATAGTGA Dhaf_4228 4476377 - 4476955 + | putative transcriptional regulator, Crp/Fnr family TERM 6212 4476989 - 4476953 - T 100 -18.4 -5.33866 | opp_overlap 4476953 GAAATCTATAAAAAA TGAGAGGTAATAATTC TCTGC GAATTATTACCTCTCA TTTTTACATAGGTCA TERM 6213 4476953 - 4476989 + T 100 -18.4 -4.67353 | opp_overlap 4476953 GAAATCTATAAAAAA TGAGAGGTAATAATTC TCTGC GAATTATTACCTCTCA TTTTTACATAGGTCA Dhaf_4229 4478195 - 4477035 - | Polysulphide reductase NrfD TERM 6214 4477266 - 4477280 + g 76 -11.4 -2.91888 | overlap 4477264 4477278 GGCGATAATGGCACC GGCAGC TAA GCTGCC TCGTTTAGGGGCTTT Dhaf_4230 4478832 - 4478209 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_4231 4481300 - 4478844 - | molybdopterin oxidoreductase Dhaf_4232 4481540 - 4482118 + | putative transcriptional regulator, Crp/Fnr family TERM 6215 4482174 - 4482154 - T 100 -9.8 -5.13344 | ACATGAATATAAAAA GAGAACCA TGGTC TGGTTCTC AAAAAGAGGGAAAAT TERM 6216 4482402 - 4482367 - T 70 -5.4 -4.50122 | TTAGACAAAAAAAGA CCTGCTCTTCAGCCTA TTTG CAATCTGAAGAGCTAG CGCAAGTCTTTAACA Dhaf_4233 4482793 - 4482380 - | transcriptional regulator, MerR family TERM 6217 4483022 - 4482993 - R 100 -12.3 -6.25578 | opp_overlap 4482990 4482993 AGCAAACAAAAAAAA CCTTCGCTATC ATATTTCG GATAGCGAAGG TCCTTTTAAAAGAGG TERM 6218 4482993 - 4483022 + r 93 -12.3 -3.08032 | opp_overlap 4482993, overlap 4482990 AGCAAACAAAAAAAA CCTTCGCTATC ATATTTCG GATAGCGAAGG TCCTTTTAAAAGAGG Dhaf_4234 4484358 - 4483054 - | Nitrite reductase (cytochrome; ammonia-forming) TERM 6219 4483416 - 4483430 + g 76 -7.2 -4.42464 | CGGCAACTTTGTCCT GAGTAT AGA ATACTC TTTCTTTAAGCGCTT Dhaf_4235 4484903 - 4484418 - | cytochrome c nitrate reductase, small subunit TERM 6220 4484864 - 4484875 + g 81 -3.6 -5.5112 | TTTTCCTTCTTCCGC CTGG GACA CCGG TTTTTTCTTGCTCCA TERM 6221 4485115 - 4485152 + r 70 -7.9 -3.60431 | gap 1, opp_overlap 4485115 ATGGTAACTGAAAAA CACAACAATCCGAACC CTGGTCA GGT-CAGATTGTTGTG TTTAGAGGTCATTTT TERM 6222 4485152 - 4485115 - R 100 -10.8 -4.74504 | gap 1, opp_overlap 4485115 ATGGTAACTGAAAAA CACAACAATCCGAACCC TGGTC AGGT-CAGATTGTTGTG TTTAGAGGTCATTTT Dhaf_4236 4486421 - 4485192 - | YibE/F family protein TERM 6223 4486054 - 4486033 - G 75 -10.2 -3.31144 | GGCTGACCTTCATAA GCGACAAG CAAAAC CTTGTCGC CCTGCTCAACTTCCG TERM 6224 4486576 - 4486615 + r 100 -23.9 -3.4252 | opp_overlap 4486576 4486579, overlap 4486579 TGATCCTACAGGCAA GAACAGGGTATTCCGTC TGAAAC GACGGAATACCCTGTTC TTCTGATACATAAAA TERM 6225 4486615 - 4486576 - R 100 -23.9 -3.12999 | opp_overlap 4486576 4486579, overlap 4486579 TGATCCTACAGGCAA GAACAGGGTATTCCGTC TGAAAC GACGGAATACCCTGTTC TTCTGATACATAAAA TERM 6226 4486579 - 4486612 + r 100 -19.8 -3.8512 | opp_overlap 4486576 4486579, overlap 4486576 TCCTACAGGCAAGAA CAGGGTATTCCGTC TGAAAC GACGGAATACCCTG TTCTTCTGATACATA TERM 6227 4486612 - 4486579 - R 100 -19.8 -3.70773 | opp_overlap 4486579 4486576, overlap 4486576 TCCTACAGGCAAGAA CAGGGTATTCCGTC TGAAAC GACGGAATACCCTG TTCTTCTGATACATA Dhaf_4237 4487734 - 4486664 - | FAD dependent oxidoreductase Dhaf_4238 4488002 - 4487793 - | transcriptional regulator, XRE family Dhaf_4239 4488462 - 4488013 - | YoaS TERM 6228 4488597 - 4488555 - R 100 -20.3 -3.93262 | opp_overlap 4488558, overlap 4488558 TCTCAAGATATGAAA TAAGGTATTGGCACTTAAT TAAAC ATCAAGTGCCAATACCTTA TAAAAAGATGACATT TERM 6229 4488594 - 4488558 - R 100 -17.6 -4.086 | opp_overlap 4488558, overlap 4488555 CAAGATATGAAATAA GGTATTGGCACTTAAT TAAAC ATCAAGTGCCAATACC TTATAAAAAGATGAC TERM 6230 4488558 - 4488594 + r 100 -15.4 -3.29511 | opp_overlap 4488558 4488555 CAAGATATGAAATAA GGTATTGGCACTTAAT TAAAC ATCAAGTGCCAATACC TTATAAAAAGATGAC Dhaf_4240 4489546 - 4488638 - | pyruvate phosphate dikinase PEP/pyruvate-binding Dhaf_4241 4491277 - 4489595 - | PEP-utilising protein mobile region TERM 6231 4491053 - 4491042 - G 70 -2.2 -4.85894 | AAATGAAAGAGAAAA GGAA ACCG CTCC ATAACAGGCGGAGGA Dhaf_4242 4491902 - 4491300 - | transcriptional regulator, TetR family TERM 6232 4491609 - 4491593 - G 73 -2.2 -5.05301 | AAATAACCAGAAAAA GCTCAG GTTTT CTCAGC GTCCACTCGACAGCA TERM 6233 4492122 - 4492082 - H 71 -3.4 -4.93547 | gap 2 GCAACTAAGCAAAAA CGGGG-TACTG-CCCTTAAA GTC CTTAAGAGACAATTGCCCCG CTTGCTACATAACCA Dhaf_4243 4492280 - 4492462 + | hypothetical protein TERM 6234 4492518 - 4492470 - f 100 -17.7 -3.27298 | gap 1, opp_overlap 4492508 4492511, overlap 4492498 TCCTGTAATTATCAA GTTCGAAGGTCCTCCCTCAACA AAGAGA TGTTGAGGGAGGACCTCC-ACC AAGAGGAGGTGCTTA TERM 6235 4492508 - 4492530 + F 74 -7.6 -4.06419 | opp_overlap 4492470 4492498, overlap 4492511 AGAGATGTTGAGGGA GGACCTCCAC CAA GAGGAGGTGC TTATTTATGGGCGAA Dhaf_4244 4492537 - 4493646 + | Radical SAM domain protein TERM 6236 4493673 - 4493702 + T 74 -5 -4.82678 | GACATTAATCCTTAA CGGGCTTGCT GAGCGGGGAA GGCAAGCTCG TTTTCGTTTTTCTAC Dhaf_4245 4495399 - 4493714 - | hypothetical protein TERM 6237 4494173 - 4494158 - G 73 -5.4 -4.54727 | gap 1, overlap 4494159 CTCCGCAAAGCAAAA GGTAGGG TAG CCCT-CC ATGGGCAGAGTGGTG TERM 6238 4494476 - 4494495 + g 80 -7.2 -4.57569 | gap 1, overlap 4494479 ATGTAGCTCTCCCCT TGCGTCTGC CAG GCAGAC-CA TTTTTAGAAGCATAC Dhaf_4246 4496343 - 4495447 - | hypothetical protein TERM 6239 4496449 - 4496489 + r 71 -8.5 -3.55548 | opp_overlap 4496454, overlap 4496454 TAGATACCGGAAAAC AAAAATCAACCGAAACA CATTAAA TGTTCCGGTTGATTTTG TTTCAAAAAGTGTTC TERM 6240 4496454 - 4496484 + r 100 -8.4 -4.86731 | opp_overlap 4496454, overlap 4496449 ACCGGAAAACAAAAA TCAACCGAAACA CATTAAA TGTTCCGGTTGA TTTTGTTTCAAAAAG TERM 6241 4496484 - 4496454 - R 100 -11.3 -5.46706 | opp_overlap 4496454 4496449 ACCGGAAAACAAAAA TCAACCGAAACAC ATTAA ATGTTCCGGTTGA TTTTGTTTCAAAAAG Dhaf_4247 4497216 - 4496524 - | hypothetical protein Dhaf_4248 4497901 - 4497419 - | hypothetical protein TERM 6242 4497817 - 4497835 + g 74 -3.9 -4.98531 | gap 1 GTAATTGATATAGTT CTG-ATGC CAAC GCATACAG TTTTTCATTTCCAGG Dhaf_4250 4498513 - 4498346 - | hypothetical protein TERM 6243 4498440 - 4498459 + g 73 -10 -3.34398 | overlap 4498439 TCATTATATTTCTCT GCCAGTGG TCGG CCATTGGC TATTTCGCCGACCAC TERM 6244 4498660 - 4498709 + r 93 -8.7 -4.53349 | opp_overlap 4498666, overlap 4498666 GTTCCCTAACCCAAT AAAAAACAGGGTACTGCTCCTTA AAAT TAAGTGGCAATACCCTGTTTATA TTTGTTTAATGGTTA TERM 6245 4498666 - 4498703 + r 100 -12.1 -4.50993 | opp_overlap 4498666, overlap 4498660 TAACCCAATAAAAAA CAGGGTACTGCTCCTTA AAAT TAAGTGGCAATACCCTG TTTATATTTGTTTAA TERM 6246 4498703 - 4498666 - R 100 -12.1 -5.5074 | opp_overlap 4498666 4498660 TAACCCAATAAAAAA CAGGGTACTGCTCCTTA AAAT TAAGTGGCAATACCCTG TTTATATTTGTTTAA Dhaf_4251 4501376 - 4498728 - | pyruvate, phosphate dikinase TERM 6247 4499018 - 4498996 - G 74 -9.8 -3.48276 | opp_overlap 4499011 TTTTGCTCCAGATAA GCCGGAAGGA ACT TCCCTTCGGC GTCATCCCTGGAGAA TERM 6248 4499370 - 4499382 + g 71 -9.1 -3.51232 | ACGGCAGCCCCGATG CCCCA GCA TGGGG TTCATTTCGGAGAGG Dhaf_4252 4502190 - 4501369 - | protein of unknown function DUF299 Dhaf_4253 4502875 - 4502228 - | Helix-turn-helix type 11 domain protein TERM 6249 4503061 - 4503024 - R 100 -6.4 -6.40073 | gap 1, opp_overlap 4503024 4503056, overlap 4503027 AATTCAAAAAAAAAA TAACGGCGCTTCTGC TGAAATTAT GCAAAAGCGCCGC-A GTGGCTTATCCAATT TERM 6250 4503059 - 4503027 - R 100 -12.8 -5.20756 | opp_overlap 4503024 4503056, overlap 4503024 TCAAAAAAAAAATAA CGGCGCTTCTGC TGAAATTAT GCAAAAGCGCCG CAGTGGCTTATCCAA Dhaf_4254 4505147 - 4503075 - | glycyl-tRNA synthetase, beta subunit TERM 6251 4503346 - 4503360 + g 71 -4.2 -4.74801 | opp_overlap 4503346 TTCTTAGGGTCCAAA GGCTGA GTT TGAGCC TTTTTACTGAGATTC TERM 6252 4504122 - 4504138 + g 76 -2.2 -5.27779 | ATCCAGCTTTTCGAC CAGCTC AGCAA GAGGTG TTTTTTGGTCTTCAC TERM 6253 4504495 - 4504528 + g 78 -5.3 -4.92756 | overlap 4504514 ACGGATTGCCGGCGC TGCTCCGGGTC CACCATGACAAA GGCCTGGAGCA TTTGTTTTTCATAGT Dhaf_4255 4506039 - 4505149 - | glycyl-tRNA synthetase, alpha subunit TERM 6254 4506189 - 4506155 - R 100 -17.3 -5.15969 | gap 1, opp_overlap 4506155 CTGTAATGCAAAAAA CTCCCGTCCC-GTAGC TTTC GCTACAGGGACGAGAG TATCCTTCCCGCGGT TERM 6255 4506155 - 4506189 + r 100 -15.1 -2.90194 | gap 1, opp_overlap 4506155 CTGTAATGCAAAAAA CTCCCGTCCC-GTAGC TTTC GCTACAGGGACGAGAG TATCCTTCCCGCGGT Dhaf_4256 4506740 - 4506435 - | hypothetical protein TERM 6256 4507257 - 4507232 - R 100 -14.9 -4.24002 | opp_overlap 4507232, overlap 4507224 CTTTAAACGTTAAAA GGTTCCACTTT AACG AAAGTGGAACC TCTAGTAAACCCAAC TERM 6257 4507232 - 4507257 + r 100 -14.9 -2.78384 | opp_overlap 4507224 4507232 CTTTAAACGTTAAAA GGTTCCACTTT AACG AAAGTGGAACC TCTAGTAAACCCAAC Dhaf_4258 4508001 - 4507483 - | protein of unknown function DUF265 Dhaf_4259 4508700 - 4508002 - | hypothetical protein TERM 6258 4508205 - 4508233 + g 76 -8.9 -3.86311 | opp_overlap 4508198, overlap 4508211 ATTCAAAAGCCGTTT CGGTTAGGGAATA AGC TATTCCCTTGCTG TTTAAATTTCCCTCT TERM 6259 4508211 - 4508227 + g 74 -9.5 -3.48703 | overlap 4508205 AAGCCGTTTCGGTTA GGGAATA AGC TATTCCC TTGCTGTTTAAATTT TERM 6260 4508248 - 4508263 + g 78 -5.4 -4.89393 | overlap 4508250 GTTTAAATTTCCCTC TACCTC TTCA GAGGTG TTTTTCTGGAATTTC Dhaf_4260 4509471 - 4508716 - | protein of unknown function DUF364 Dhaf_4261 4510535 - 4509504 - | ABC transporter related Dhaf_4262 4511220 - 4510522 - | cobalamin synthesis protein P47K Dhaf_4263 4511567 - 4512580 + | transport system permease protein Dhaf_4264 4512577 - 4513383 + | ABC transporter related TERM 6261 4514307 - 4514297 - g 75 -5.4 -4.82901 | GTCTCCGGAGAAAAA TCCT GGC AGGA AATAAAAGCCATCAA TERM 6262 4514329 - 4514315 - g 74 -4.2 -4.93877 | TGGCAGGAAATAAAA GCCATC AAA AACGGC AAATATTATGAAGTT Dhaf_4265 4513367 - 4514548 + | periplasmic binding protein TERM 6263 4514630 - 4514661 + T 100 -14.6 -2.62396 | opp_overlap 4514635, overlap 4514635 ACGTCGCAGGTGTAA CAAAAGACGACTTC CACG GAAGCCGTCTTTTG TCATATCCCAGACTG TERM 6264 4514635 - 4514656 + T 93 -8.7 -4.50976 | opp_overlap 4514635, overlap 4514630 GCAGGTGTAACAAAA GACGACTTC CACG GAAGCCGTC TTTTGTCATATCCCA TERM 6265 4514656 - 4514635 - T 100 -10.9 -4.64676 | opp_overlap 4514635 4514630 GCAGGTGTAACAAAA GACGACTTC CACG GAAGCCGTC TTTTGTCATATCCCA Dhaf_4266 4516683 - 4514779 - | selenocysteine-specific translation elongation factor TERM 6266 4514880 - 4514894 + g 74 -10 -3.53444 | opp_overlap 4514879 TCTTTCTGCCAATAT TCAGGG CAT CCCTGA TTTCCGCCACGCTGA TERM 6267 4515349 - 4515363 + g 74 -4.4 -4.90136 | CCGGAAGGCGGATTG TATTTT ATT AAAATA TTTTTCATATTGGTT Dhaf_4267 4518118 - 4516688 - | L-seryl-tRNA(Sec) selenium transferase TERM 6268 4517308 - 4517296 - G 78 -9.1 -4.0162 | TGCTCAGATCATAAA GGCAG CCG CTGCC CAAATCCTCCATCAC Dhaf_4268 4519098 - 4518370 - | putative formate dehydrogenase formation protein FdhE TERM 6269 4519168 - 4519119 - R 100 -15.6 -4.41348 | opp_overlap 4519152 TTCCTCCTAAAGAAA GTCTGCCGCCAGCCCCTAAGCC CAAACC GGCACCCGGGCCGGCAGCAGAC CGGATCATTTATTTG Dhaf_4269 4519901 - 4519218 - | formate dehydrogenase, gamma subunit Dhaf_4270 4520716 - 4519901 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_4271 4523770 - 4520720 - | formate dehydrogenase, alpha subunit TERM 6270 4522232 - 4522256 + g 75 -11.5 -2.71364 | TACCATGCTGTAGTT CTTGCCTGAGT TGT ACTTAGGCAGG TAATTAAAGCAATAA TERM 6271 4524036 - 4524021 - R 72 -6.2 -4.40601 | opp_overlap 4524020 4524029, overlap 4524029 AATTTAGACAATAAA GAAAGT GATA ACTTTC AGTTACTTTCTGTTT TERM 6272 4524084 - 4524141 + r 100 -16 -2.93992 | gap 1, opp_overlap 4524077 4524093 4524098, overlap 4524098 4524137 GATAAGCACTGAAGG CTTCAATAAG-AAAAGACTCCGGAGAG TACAT TTCTCCGAAGTCTTTTGCCTATTGAAG TCCTATTTCATTTTC TERM 6273 4524131 - 4524093 - R 84 -11.2 -3.63569 | opp_overlap 4524084 4524098, overlap 4524098 TGAAGGCTTCAATAA GAAAAGACTCCGGAGA GTACATT TCTCCGAAGTCTTTTG CCTATTGAAGTCCTA TERM 6274 4524126 - 4524098 - R 100 -11.1 -4.89477 | opp_overlap 4524084 4524098, overlap 4524093 GCTTCAATAAGAAAA GACTCCGGAGA GTACATT TCTCCGAAGTC TTTTGCCTATTGAAG TERM 6275 4524098 - 4524126 + r 88 -9.6 -4.28254 | opp_overlap 4524098 4524093, overlap 4524084 GCTTCAATAAGAAAA GACTCCGGAGAG TACAT TTCTCCGAAGTC TTTTGCCTATTGAAG Dhaf_4272 4524594 - 4524133 - | hypothetical protein Dhaf_4273 4525378 - 4524557 - | DNA repair protein RecO Dhaf_4274 4526070 - 4525414 - | deoxyribose-phosphate aldolase TERM 6276 4525578 - 4525601 + g 74 -6.6 -4.371 | gap 1 CTTCCACTGTAGCTC CG-CCGCCGGC AAA GCCTGTGGACG TTTTGATATAGTCCG Dhaf_4275 4526987 - 4526076 - | GTP-binding protein Era TERM 6277 4526291 - 4526302 + g 76 -2.2 -5.27476 | opp_overlap 4526282, overlap 4526282 CAATCAGGGCGCGGA CCTT GATC AGGG TTTTCTTTTCTTCCA Dhaf_4276 4527729 - 4527310 - | cytidine deaminase TERM 6278 4527412 - 4527399 - G 75 -8.1 -4.26327 | overlap 4527396 CATTGACTAAAATAA CCAGG CAAT CCTGG GAAAACTCCCGCAAC TERM 6279 4528094 - 4528070 - R 88 -10.1 -4.08706 | CCTGCAGCAGAGAAA GGTTGGAAACA GGA CATTTCCAACC CGCCATTGAGAACAA Dhaf_4277 4528674 - 4528291 - | diacylglycerol kinase TERM 6280 4528637 - 4528653 + g 83 -4.4 -5.36965 | opp_overlap 4528637 AAAGCATCGCCAAAG CTTTCC CAGTT GGAAGG TTTTTTATGATATTG Dhaf_4278 4529165 - 4528692 - | protein of unknown function UPF0054 Dhaf_4279 4531445 - 4529205 - | metal dependent phosphohydrolase TERM 6281 4530655 - 4530637 - G 76 -11.8 -2.76721 | overlap 4530639 ACAGAACGCCAAGGA GACTGGTT CTC AACCAGTC CGTAGCCCACCAGAA TERM 6282 4531480 - 4531508 + r 71 -3.2 -5.00616 | overlap 4531472 4531483 ACCTGGTTCTGAAGT TTCTTCAGCCTT TTCAT AAGCCTGAATAA TTTTTTGAACGAGAG Dhaf_4280 4532430 - 4531459 - | PhoH family protein Dhaf_4281 4533677 - 4532466 - | sporulation protein YqfD Dhaf_4282 4533982 - 4533710 - | sporulation protein YqfC TERM 6283 4534030 - 4533986 - R 100 -18.1 -4.21607 | opp_overlap 4533989, overlap 4533989 TTTATCCAACATAAA TAACCTCCTCCCTTCTAAAAC CAT GTTTATGAAGGAAGGAGGTTA AATAGTCCAAGCTTG TERM 6284 4534027 - 4533989 - R 100 -15.4 -4.22375 | opp_overlap 4533989, overlap 4533986 ATCCAACATAAATAA CCTCCTCCCTTCTAAAAC CAT GTTTATGAAGGAAGGAGG TTAAATAGTCCAAGC TERM 6285 4533989 - 4534027 + r 95 -13.2 -3.09516 | opp_overlap 4533989 4533986 ATCCAACATAAATAA CCTCCTCCCTTCTAAAAC CAT GTTTATGAAGGAAGGAGG TTAAATAGTCCAAGC Dhaf_4283 4534566 - 4534099 - | NADH ubiquinone oxidoreductase 20 kDa subunit TERM 6286 4534357 - 4534343 - G 82 -11.4 -3.30651 | overlap 4534341 GTGCACATCAGAATA TCCGCG TGG CGCGGA GAAGCCACAAAATCC Dhaf_4284 4536239 - 4534584 - | NADH dehydrogenase (ubiquinone) 30 kDa subunit TERM 6287 4534826 - 4534816 - GR 73 -5.4 -4.56597 | GGCTGGGGTGAAAAA GGTT CTG AACC GTTAAGAGCAGAACC Dhaf_4285 4537704 - 4536205 - | NADH dehydrogenase (quinone) TERM 6288 4536846 - 4536836 - GR 75 -3.2 -5.093 | overlap 4536801 TGCAAAAGAATAAAA GCCA CCA TAGC ACCAAGAGAGATTAA TERM 6289 4537566 - 4537510 - GR 76 -10.9 -2.64126 | overlap 4537513 AATCACACCGAGAAG CAAGGCACTCAAAGCATCCCAGGAAAA AAA TCCTCCCCAAATGCTTTGCGGGCCCTG GCCGAACACCCGCAG TERM 6290 4537563 - 4537513 - GR 73 -9 -3.46659 | overlap 4537510 CACACCGAGAAGCAA GGCACTCAAAGCATCCCAGGAAAA AAA TCCTCCCCAAATGCTTTGCGGGCC CTGGCCGAACACCCG TERM 6291 4537692 - 4537676 - GR 100 -8.7 -5.10968 | ATCAACATACAAAAA GCTGCCA CAA TGGCAAC AACTATAAACATTCA Dhaf_4286 4538370 - 4537714 - | hypothetical protein TERM 6292 4537991 - 4537973 - G 72 -6 -4.34711 | AAAAGCAAGGCAAAA GCAATGGC CAA ACCATTAC GCAGTGCAGGCTCCA Dhaf_4287 4539358 - 4538372 - | hydrogenase, membrane subunit 3-like protein (EchB-like) Dhaf_4288 4541284 - 4539371 - | NADH dehydrogenase (quinone) TERM 6293 4539564 - 4539575 + g 71 -3 -4.88736 | opp_overlap 4539560, overlap 4539558 4539558 TGTAACACATAGGGG GTTT CCCC AAAC TTTTTATCAATAATG TERM 6294 4539809 - 4539792 - G 76 -7 -4.44448 | ATCAGGTTAAAGAAA TCTGCC CAAAGC GGCAGA GCTAAACTGTCGGTG TERM 6295 4540950 - 4540936 - G 80 -2.8 -5.37865 | GCAAGAACGAAAAAA GGGA CATGAGT TCCC AAAGAAAAAGAAAAT TERM 6296 4541551 - 4541574 + r 78 -9.6 -3.6106 | opp_overlap 4541552, overlap 4541552 4541554 TTTATTGCGCAAAAA ACACACCCAA AAAC TTGGGTGTGC TTTCCGCCTATTCAG TERM 6297 4541552 - 4541573 + r 91 -13.1 -2.76315 | opp_overlap 4541552, overlap 4541551 4541554 TTATTGCGCAAAAAA CACACCCAA AAAC TTGGGTGTG CTTTCCGCCTATTCA TERM 6298 4541573 - 4541552 - R 100 -13.1 -5.02074 | opp_overlap 4541551 4541552 4541554 TTATTGCGCAAAAAA CACACCCAA AAAC TTGGGTGTG CTTTCCGCCTATTCA TERM 6299 4541554 - 4541571 + r 73 -9.9 -2.92439 | opp_overlap 4541552, overlap 4541552 4541551 ATTGCGCAAAAAACA CACCCAA AAAC TTGGGTG TGCTTTCCGCCTATT Dhaf_4289 4542209 - 4541598 - | lipolytic protein G-D-S-L family TERM 6300 4541959 - 4541947 - G 70 -7.7 -3.84451 | TGGCCTAAAGCTAAA CCCTT GCC AAGGG CGAGCAGATCGTTTG Dhaf_4290 4542738 - 4542280 - | YbaK/prolyl-tRNA synthetase associated region TERM 6301 4542790 - 4542763 - R 100 -12.2 -4.1964 | gap 1, opp_overlap 4542763 CTTAACATGTTAAAA GCCTGATTGC-TA AAC TATGCAATCAGGC TTTTAGTGAGCTAAG TERM 6302 4542763 - 4542790 + r 100 -12.2 -4.26903 | gap 1, opp_overlap 4542763 CTTAACATGTTAAAA GCCTGATTGC-TA AAC TATGCAATCAGGC TTTTAGTGAGCTAAG Dhaf_4291 4543253 - 4542801 - | GatB/YqeY domain-containing protein Dhaf_4292 4543444 - 4543268 - | ribosomal protein S21 Dhaf_4293 4543878 - 4543534 - | histidine triad (HIT) protein Dhaf_4294 4545052 - 4543922 - | hypothetical protein TERM 6303 4545038 - 4545020 - G 71 -3.1 -5.00616 | opp_overlap 4545020 TGTTGGCTTAAAAAA CCGTTCT TTTGC AGAAGGG CTGTCTTTTTTCATG Dhaf_4295 4546409 - 4545090 - | RNA modification enzyme, MiaB family Dhaf_4296 4547197 - 4546460 - | protein of unknown function DUF558 Dhaf_4297 4548122 - 4547184 - | ribosomal protein L11 methyltransferase Dhaf_4298 4549359 - 4548226 - | chaperone protein DnaJ TERM 6304 4548260 - 4548276 + g 82 -5.1 -5.04385 | overlap 4548261 CGGATATTTTCTTTG ACCTTCT CGA AGAAGGA TTTTTTGCCCATCTG TERM 6305 4548261 - 4548275 + g 71 -8.6 -3.61908 | overlap 4548260 GGATATTTTCTTTGA CCTTCT CGA AGAAGG ATTTTTTGCCCATCT TERM 6306 4549276 - 4549294 + g 74 -3 -5.10877 | overlap 4549270 AGGATGATATTGGCG GGCCAGTT TTC GATAGGCC TTTTTGATTTCTTGT TERM 6307 4549455 - 4549420 - R 88 -12.6 -2.66316 | opp_overlap 4549423, overlap 4549417 GCCTTCAGCACATGA TGATTGGGCACAGGGG AAAA CCCCTGTACCCAATTC TTTCCTTCACTCTGA TERM 6308 4549423 - 4549452 + r 100 -16.5 -4.09321 | opp_overlap 4549420 4549417 TTCAGCACATGATGA TTGGGCACAGGGG AAAA CCCCTGTACCCAA TTCTTTCCTTCACTC Dhaf_4299 4551315 - 4549471 - | chaperone protein DnaK Dhaf_4300 4551982 - 4551341 - | GrpE protein Dhaf_4301 4553037 - 4552000 - | heat-inducible transcription repressor HrcA TERM 6309 4552248 - 4552270 + g 71 -6.3 -4.14615 | TGATGATTTGGGCTC CCTCTTCGA AAATC TGGAAGAGG TTTCTGATCTTTTCT TERM 6310 4553071 - 4553103 + r 85 -9.3 -4.08571 | ACCCTCGTTTTCCTC TTGTTAGCACTCG ACCTTAA TGAGTGCTAACGA TTTATGATATTATAG TERM 6311 4553271 - 4553220 - R 100 -24.2 -4.11394 | opp_overlap 4553238 ATTTCACGGGTAAAA TTTCGATAGCCGGAGAAATTGAAT TTAA ATTCAATTTCTCCAGCTATCGGAA CAAAAGAGATTGTGC Dhaf_4302 4553992 - 4553324 - | sortase family protein TERM 6312 4553775 - 4553802 + g 75 -7.7 -4.1711 | gap 1, opp_overlap 4553775 4553778, overlap 4553776 4553777 AACTCTTCCGGCAAA TCA-CCCGGCGA CTCTT TCGCCGGGCTGC TTTCTTCAGCATCCT TERM 6313 4553776 - 4553801 + g 76 -11.2 -3.09784 | gap 1, opp_overlap 4553775 4553778, overlap 4553775 4553777 ACTCTTCCGGCAAAT CA-CCCGGCGA CTCTT TCGCCGGGCTG CTTTCTTCAGCATCC TERM 6314 4553777 - 4553799 + g 73 -10.5 -3.10512 | opp_overlap 4553775 4553778, overlap 4553776 4553775 CTCTTCCGGCAAATC ACCCGGCGA CTCTT TCGCCGGGC TGCTTTCTTCAGCAT TERM 6315 4553798 - 4553778 - G 88 -14 -2.90496 | opp_overlap 4553777 4553776 4553775, overlap 4553775 TCTTCCGGCAAATCA CCCGGCGA CTCTT TCGCCGGG CTGCTTTCTTCAGCA TERM 6316 4554045 - 4554022 - R 100 -12.5 -3.88985 | opp_overlap 4554022 4554024 AAAATTTTGTAGAAA GAGGCAGAG TCTCTG CTCTGCCTC TTAACCGTCTATGCC TERM 6317 4554024 - 4554043 + r 73 -10 -3.05819 | opp_overlap 4554022, overlap 4554022 AATTTTGTAGAAAGA GGCAGAGT CTCT GCTCTGCC TCTTAACCGTCTATG Dhaf_4303 4560422 - 4554054 - | LPXTG-motif cell wall anchor domain protein TERM 6318 4554137 - 4554175 + g 71 -7.2 -4.02736 | overlap 4554130 4554170 CTGAATTGCCGTTTT CACCGGTCTTCGGCAAGG TCC CTTTGCCGTCCGCCGGGG TTTCTCCTGTACCTT TERM 6319 4554344 - 4554356 + g 73 -4.7 -4.75289 | TAGCTGGTGTTTGCC CAGGC ACT GCCGG TTTTGTGTTATCCTC TERM 6320 4555144 - 4555154 + g 70 -2.4 -4.86621 | TCGGCGTTCACTTCG CCGG CTT CCGC TTTTTGCTTAAAGCT TERM 6321 4556808 - 4556828 + g 82 -5.3 -5.14965 | overlap 4556810 CTTAAGCTTAAGGGT GCCGTCGCT GCC GGTGACGCC TTTTTTGATGACCGT TERM 6322 4556897 - 4556887 - G 71 -6.8 -4.14472 | opp_overlap 4556887 TCAACACCCGGAAAA GGGA CAC TCCC TTCCTTGGTCTTCGT TERM 6323 4558910 - 4558921 + g 83 -4.4 -5.46706 | TGTTAGCCTGATACT TACC GTCG GGTA TTTTTGTTTTAAACT TERM 6324 4559157 - 4559173 + g 70 -2.1 -4.88388 | overlap 4559159 AATGCTTTGGTCCGC CAGGTCC GCA GTACCCG TTTTTGTAACATTAT Dhaf_4304 4561734 - 4560685 - | response regulator receiver and SARP domain protein Dhaf_4305 4563734 - 4561770 - | signal transduction histidine kinase, LytS TERM 6325 4563005 - 4563015 + g 77 -2.6 -5.20333 | CAACAGCCATGCTCA TAAA TAT TTTA TTTTTCTTATACCTG TERM 6326 4563268 - 4563301 + g 100 -9.5 -5.47399 | overlap 4563271 CTGAAGAGATACTCA TTTTCCAGGAGGGCC GGCC GGCCATCCTGGATTA TTTTTTTCCCATTGA TERM 6327 4563271 - 4563298 + g 100 -15.6 -4.80853 | overlap 4563268 AAGAGATACTCATTT TCCAGGAGGGCC GGCC GGCCATCCTGGA TTATTTTTTTCCCAT TERM 6328 4563537 - 4563508 - G 73 -7.9 -4.11216 | GTGGCATCCTTAAAA TCATCGGGGGAAA GAAG TTGCCCCCAATAA AATTCCCATTCGCCG Dhaf_4306 4564891 - 4563764 - | oxygen-independent coproporphyrinogen III oxidase TERM 6329 4563908 - 4563895 - G 71 -4.5 -4.65838 | opp_overlap 4563895, overlap 4563886 GATAGAGTTCAAAAA GATCG GCAC CGACC TCCTTTTTGAACTGC Dhaf_4307 4566913 - 4565108 - | GTP-binding protein LepA TERM 6330 4565334 - 4565355 + g 78 -10.9 -3.3692 | gap 1, opp_overlap 4565332, overlap 4565334 GGCACCTCGAACATC TGCCGGGGGA TGA TCCCCCG-CA ATTTTTCCACTAAGC TERM 6331 4565334 - 4565356 + g 81 -7.6 -4.62069 | opp_overlap 4565332, overlap 4565334 GGCACCTCGAACATC TGCCGGGGGA TGA TCCCCCGCAA TTTTTCCACTAAGCG TERM 6332 4566905 - 4566915 + g 73 -5.4 -4.60889 | overlap 4566899 TATACATTGTGAGGC CTGT GCC ACAG TTTTTACCCCTCATT TERM 6333 4567077 - 4567051 - R 78 -2.1 -5.46657 | opp_overlap 4567054, overlap 4567053 GAGTTCAATAAAAAA GTTCGCCCCAG ACTTA CTGAAGCGTCC TTTTCTTCAACCCTT Dhaf_4308 4568165 - 4567113 - | hypothetical protein TERM 6334 4568175 - 4568198 + r 73 -8.2 -3.65294 | opp_overlap 4568175, overlap 4568171 4568178 CCCCATGAAGAGAAA GAAGAAGCAA TGAC TTGCTCCTTC TTAATTTCTATGAAG TERM 6335 4568198 - 4568175 - R 91 -10.4 -4.23674 | opp_overlap 4568175 4568171 4568178 CCCCATGAAGAGAAA GAAGAAGCAA TGAC TTGCTCCTTC TTAATTTCTATGAAG Dhaf_4309 4570074 - 4568278 - | flavocytochrome c TERM 6336 4568740 - 4568712 - G 73 -10.3 -3.21099 | opp_overlap 4568712 GGTTTCCACCATGAA CTCCACCGGTGAT TTC ACCACCGGCAAAG AGTCCCGGAATAGGA TERM 6337 4570243 - 4570224 - R 88 -10.8 -3.79668 | opp_overlap 4570226 4570228 4570229, overlap 4570229 ATGTAATTTATGAAA GTGAATGC CGAG GCATTCAC CCCGGCACTTCTATT TERM 6338 4570250 - 4570229 - R 76 -10.1 -3.30969 | opp_overlap 4570229 4570228 4570226, overlap 4570224 ATTTATGAAAGTGAA TGCCGAGGC ATTC ACCCCGGCA CTTCTATTAAATCTC Dhaf_4310 4570982 - 4570257 - | response regulator receiver and unknown domain protein Dhaf_4311 4572580 - 4570979 - | signal transduction histidine kinase regulating citrate/malate metabolism Dhaf_4312 4574154 - 4572589 - | integral membrane protein MviN TERM 6339 4573325 - 4573314 - G 78 -5.8 -4.81551 | TAGCCAGAGCAAAAA TGCC CACC GGCA GCTGGTATAAACGGT TERM 6340 4573974 - 4573954 - G 85 -9.7 -4.329 | GAATACAGGAATAAA GGCAGAGCT TAA AACTCCGCC TACTAAAAGCCAATA Dhaf_4313 4575296 - 4574214 - | stage II sporulation protein P TERM 6341 4574437 - 4574448 + g 81 -5.8 -4.83615 | overlap 4574426 ATGGCTTCATTGGTT TCCC AATG GGGA TTTTTCTGACCAATG TERM 6342 4575244 - 4575223 - G 90 -7.9 -5.06116 | gap 1 AAAATAAGAAGAAAA CCGCGAGCCC AGC GGGC-CGAGG GCCAAAAACTCCATC TERM 6343 4575343 - 4575301 - R 90 -5.7 -5.4505 | gap 1 TCTTTCAACAAAAAA CTTGTCCCCCTTTCCTTCTT TACT AAGAAATAT-GAGGGACAAG TTCTTCTTAGAACCT Dhaf_4314 4575704 - 4575372 - | membrane protein of unknown function Dhaf_4315 4575886 - 4576158 + | ribosomal protein S20 TERM 6344 4576246 - 4576200 - T 100 -29.8 -4.19927 | opp_overlap 4576196 4576200 AAAACGACATAGAAA GAGCGTGTCGCTCTGTGTTTAT ATT ATGAACACAGAGCGACACGCTC TTCTTATATTGCTTA TERM 6345 4576200 - 4576246 + T 100 -32 -4.00234 | opp_overlap 4576200, overlap 4576196 AAAACGACATAGAAA GAGCGTGTCGCTCTGTGTTTAT ATT ATGAACACAGAGCGACACGCTC TTCTTATATTGCTTA Dhaf_4316 4577257 - 4576259 - | DNA polymerase III, delta subunit TERM 6346 4576637 - 4576619 - G 71 -8.8 -3.6707 | ATCCAAGAGTTCAAA GACAGTGG CCT CCACCGCC TGGGGAACCAAACTC TERM 6347 4577337 - 4577315 - R 87 -6.3 -5.22258 | gap 1, overlap 4577317 GAAAGCAAAAGAAAA GACCCCTCCA AAAC TGAAGGGG-C AAAAGAAAGAGGAGG TERM 6348 4577336 - 4577317 - R 88 -10 -4.20163 | overlap 4577315 AAGCAAAAGAAAAGA CCCCTCCA AAAC TGAAGGGG CAAAAGAAAGAGGAG TERM 6349 4577396 - 4577415 + r 91 -6.6 -5.58209 | CCACCCCGTTAAGTT TTATACAT TTAT ATGTATAA TTTTTTTAAATTTAA Dhaf_4317 4580078 - 4577460 - | ComEC/Rec2-related protein TERM 6350 4578849 - 4578834 - G 80 -9 -4.21773 | TCCCAATACAAACAA GGCCAA CAGA TTGGCC AGAACTCCGATAATG TERM 6351 4579233 - 4579220 - G 76 -2.3 -5.26316 | opp_overlap 4579220 GCAGGGCATAAAAAA CCATG AGGG CAAGG GTTATTCCCAACCGC TERM 6352 4579733 - 4579716 - G 74 -4.1 -5.00616 | gap 1, overlap 4579718 TTTTTTCTTAAAAAA GTCCCCGG GTT CCG-GAAC ATCGACAGGTCCCAG Dhaf_4318 4580725 - 4580075 - | competence protein ComEA helix-hairpin-helix repeat protein Dhaf_4319 4582369 - 4580765 - | choline/carnitine/betaine transporter Dhaf_4320 4582467 - 4583750 + | transcriptional regulator, AraC family Dhaf_4321 4583771 - 4584415 + | cobalamin B12-binding domain protein Dhaf_4322 4586288 - 4584453 - | ferredoxin TERM 6353 4584804 - 4584830 + g 100 -11.8 -5.31275 | CAGTTGTAAGGCTTC GATATCTCTTTG ACC TAAAGAGATATC TTTTTTATGCTGCCG Dhaf_4323 4586981 - 4586313 - | Protein of unknown function DUF1638 TERM 6354 4586553 - 4586574 + g 73 -3.6 -4.84359 | overlap 4586543 GTAGTGTCCGTAAAG GGCTTGGA TGATCT TCCCGGCC TTTTTCTCACCATAC TERM 6355 4586996 - 4587037 + r 76 -10.4 -2.99179 | gap 1, opp_overlap 4587006, overlap 4586993 4587006 TAGTGATTCTCCTGA TGAGGTAAAACACCCAGAT GCAAA ATCTGAGTGTTTTACC-CG TGGTTTAAGTTCTGT TERM 6356 4587028 - 4587006 - R 79 -8.5 -4.21194 | opp_overlap 4586996 4586993 4587006 CCTGATGAGGTAAAA CACCCAGAT GCAAA ATCTGAGTG TTTTACCCGTGGTTT Dhaf_4324 4588549 - 4587065 - | choline/carnitine/betaine transporter TERM 6357 4588635 - 4588605 - R 74 -7.6 -4.0641 | gap 1, opp_overlap 4588601 4588600 4588605 TGCTATTGAGAGAAA TCAGCGGCAGGTG TGTAAC CAAC-GCCGCTGA TTACATTGTTCTAAC Dhaf_4325 4589331 - 4588687 - | methyltransferase cognate corrinoid protein Dhaf_4326 4590800 - 4589370 - | trimethylamine methyltransferase TERM 6358 4590880 - 4590866 - R 85 -5.6 -5.10033 | overlap 4590867 4590868 TCAAGATAAAGAAAA CCCGGC TTC GCCGAA CCTTAAACCCATGCC TERM 6359 4590917 - 4590952 + r 78 -9.2 -3.64915 | gap 1, opp_overlap 4590938, overlap 4590906 4590938 TGAGGCGAAGTCGCT GGTTGCGCT-TATGCTT AGA AAGTATATAGCGCAAGC TTATACTTTCTGACA Dhaf_4327 4591900 - 4590980 - | Tetrahydromethanopterin S-methyltransferase TERM 6360 4592136 - 4592097 - R 100 -10.8 -5.27779 | opp_overlap 4592097 TTGAAGACTAAAAAA GCTGTTGCTCAACAAACG TCAC CGTTCATTTTGCAACAGC TTTATCCCACATCCG Dhaf_4328 4594696 - 4592213 - | leucyl-tRNA synthetase TERM 6361 4594782 - 4594759 - R 100 -11 -5.47431 | opp_overlap 4594759, overlap 4594777 TCAAGATATAAAAAA CTCCCATCCC TAAA GGGACGAGAG TAACTTCCCGCGGTA Dhaf_4329 4595351 - 4595013 - | iojap-like protein TERM 6362 4595286 - 4595297 + g 81 -3.6 -5.47159 | GAGGTCAAGCAGAAT GGTC TCCC GGCC TTTTTTGTCTTCAAC Dhaf_4330 4595916 - 4595338 - | metal dependent phosphohydrolase TERM 6363 4596082 - 4596137 + r 78 -2.4 -5.50499 | opp_overlap 4596095, overlap 4596084 4596086 AAGCTTATACTTTCT GACAGTGCGAGAAGACCCTTCTGACC TTTT GGGCAAGAGGGTCTTCCAGAACTATG TTTTTTTACATCTGC TERM 6364 4596086 - 4596133 + r 72 -7.6 -3.77789 | opp_overlap 4596095, overlap 4596084 4596082 TTATACTTTCTGACA GTGCGAGAAGACCCTTCTGACC TTTT GGGCAAGAGGGTCTTCCAGAAC TATGTTTTTTTACAT Dhaf_4331 4596394 - 4596143 - | RNP-1 like RNA-binding protein Dhaf_4332 4597132 - 4596509 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 6365 4596928 - 4596911 - G 82 -5.6 -5.1361 | AGAAACTTCAAAAAA GCTGTT ATCCTG AACAGC ACGTTTGACCATTTC TERM 6366 4597202 - 4597180 - R 80 -11.4 -2.67143 | opp_overlap 4597159, overlap 4597177 ATACCTAGTATAGCA CCTTATCCTC TGG GAAGATAAGG CTATCGCGGCAAATC Dhaf_4333 4597496 - 4597203 - | protein of unknown function UPF0044 TERM 6367 4597342 - 4597355 + g 70 -8.1 -3.794 | TCTTCCATGCTGTTA GGGAG CACT CTCCC TTTAATCAATTCCCG Dhaf_4334 4598807 - 4597533 - | GTP-binding protein Obg/CgtA Dhaf_4335 4599413 - 4598841 - | signal transduction histidine kinase regulating citrate/malate metabolism TERM 6368 4599443 - 4599423 - R 100 -14.7 -4.77867 | opp_overlap 4599419 ACACATAACACAAAA CCCCCGGGA TTC TCCCAGGGG TGCGATTGTGATTTC Dhaf_4336 4599757 - 4599461 - | ribosomal protein L27 Dhaf_4337 4600110 - 4599751 - | protein of unknown function DUF464 Dhaf_4338 4600423 - 4600112 - | ribosomal protein L21 Dhaf_4339 4601886 - 4600651 - | ribonuclease, Rne/Rng family TERM 6369 4601244 - 4601228 - G 72 -10.1 -3.07816 | TCCTGATCCACCCAA TCCCGGA TCG CCCGGGA AACCAGATCCACATC Dhaf_4340 4602609 - 4601896 - | radical sam protein, putative Dhaf_4341 4604462 - 4602606 - | Radical SAM domain protein TERM 6370 4604252 - 4604242 - G 73 -5.4 -4.60797 | opp_overlap 4604242 CGTTCACATAGAAAA TCCT CAT AGGA GTTTACCAAATGATA Dhaf_4342 4605478 - 4604603 - | peptidase M50 TERM 6371 4604809 - 4604821 + g 77 -4.1 -5.03715 | overlap 4604791 TCATGATTCCTTTAT GGAGA AGT TCTTC TTTTTTACGGGTAAT Dhaf_4343 4606314 - 4605568 - | Peptidase M23 TERM 6372 4606179 - 4606195 + g 100 -10.1 -5.60689 | opp_overlap 4606179 4606181 CGGTCCATTGATACA GAGGCCC CAA GGGCTTC TTTTTTCTTGTATAG TERM 6373 4606925 - 4606896 - R 87 -6.3 -5.14985 | opp_overlap 4606896 4606899 CCAAAGACACAAAAA GCACCGACCTGCC CTAG AGCCTGTCGGTAC CTTTTCTCTGAACAT Dhaf_4344 4608116 - 4606953 - | rod shape-determining protein RodA TERM 6374 4608270 - 4608234 - R 100 -9.6 -5.43414 | opp_overlap 4608236 4608238 ATTATACACAAAAAA GTGCCGTAAGAC TGCGTTTTTTAAG GTCTTACGGCAC TTGCCCGACTATTCA TERM 6375 4608238 - 4608249 + r 71 -2.2 -5.09173 | opp_overlap 4608234, overlap 4608236 TACACAAAAAAGTGC CGTA AGAC TGCG TTTTTTAAGGTCTTA Dhaf_4345 4608579 - 4608304 - | cell division topological specificity factor MinE Dhaf_4346 4609404 - 4608610 - | septum site-determining protein MinD Dhaf_4347 4610157 - 4609471 - | septum site-determining protein MinC Dhaf_4348 4612468 - 4610375 - | penicillin-binding protein 2 TERM 6376 4611027 - 4611046 + g 77 -4.9 -4.87626 | TCCTCTTCGATTTTG GCAAGGG CATTAT CCCTGGC TTTTTCATATTGGGG TERM 6377 4611846 - 4611863 + g 74 -2.7 -5.06414 | opp_overlap 4611842 4611846 GTGTATTTAAACCCA TCCTC CTGGGCTT GAGGA TTTTTATTAAACGAA TERM 6378 4612168 - 4612154 - G 81 -12.8 -2.53015 | opp_overlap 4612148 ATAGGGTTTAATGTA GCCCGC CAG GCGGGC AACGACTTCCTGCAC TERM 6379 4612376 - 4612350 - G 85 -12.4 -3.36273 | overlap 4612351 GTCTCGTAATAGGAA GCTTTGGCGATT TGT AATCGCCAAAGG TTGAAGCCAAGAATC TERM 6380 4612375 - 4612351 - G 100 -15.9 -2.6155 | overlap 4612350 TCTCGTAATAGGAAG CTTTGGCGATT TGT AATCGCCAAAG GTTGAAGCCAAGAAT Dhaf_4349 4613005 - 4612496 - | rod shape-determining protein MreD TERM 6381 4612841 - 4612818 - G 81 -6 -4.96848 | overlap 4612820 CTGCCCAGATAAAAA TCTGCGAGCA TCCC TGCTCCCAAA CCCCAAAGTGCTCCC Dhaf_4350 4613874 - 4613008 - | rod shape-determining protein MreC TERM 6382 4613852 - 4613835 - G 71 -4.1 -4.74215 | ACACGAGGAAGAAAA CGAGAAC CATA ATTCCCG TTCCAGTCACTCTTT Dhaf_4351 4614916 - 4613900 - | cell shape determining protein, MreB/Mrl family TERM 6383 4613926 - 4613942 + g 87 -10.9 -4.18697 | opp_overlap 4613916 4613924 GCAAAGCAGCAATTC TGCGGAA AAC TTCCGCA TTTTCCAATACTTTT TERM 6384 4614739 - 4614762 + g 77 -4.6 -4.84353 | gap 1, opp_overlap 4614739 4614741, overlap 4614739 4614741 GCCGAATCGCTACAA T-ATTGCCCGG TGT CCGGCCAATCA TTTCTTTTGCTTTAT TERM 6385 4614785 - 4614797 + g 80 -2.6 -5.50499 | TGCTTTATCCCCTAC GGCC AGCGG GGTC TTTTTTTCAATATCA Dhaf_4352 4615782 - 4615099 - | DNA repair protein RadC Dhaf_4353 4616389 - 4615751 - | maf protein Dhaf_4354 4616654 - 4616391 - | hypothetical protein TERM 6386 4616682 - 4616709 + r 79 -7 -4.61527 | gap 1, opp_overlap 4616682 4616685, overlap 4616683 4616685 TTCACCCATAGAAAT GTAGCCAGG-GCA TGT TGCACCTGGCTGG TTTTTCGACACTTTT TERM 6387 4616683 - 4616708 + r 78 -10.5 -3.35832 | gap 1, opp_overlap 4616682 4616685, overlap 4616682 4616685 TCACCCATAGAAATG TAGCCAGG-GCA TGT TGCACCTGGCTG GTTTTTCGACACTTT TERM 6388 4616706 - 4616685 - R 77 -10.9 -2.73797 | gap 1, opp_overlap 4616683 4616682 4616685, overlap 4616682 ACCCATAGAAATGTA GCCAGG-GCA TGT TGCACCTGGC TGGTTTTTCGACACT TERM 6389 4616685 - 4616706 + r 81 -10.9 -3.23975 | gap 1, opp_overlap 4616685 4616682, overlap 4616683 4616682 ACCCATAGAAATGTA GCCAGG-GCA TGT TGCACCTGGC TGGTTTTTCGACACT Dhaf_4355 4618225 - 4616801 - | aspartate ammonia-lyase TERM 6390 4618311 - 4618278 - R 73 -8.3 -3.58854 | opp_overlap 4618285, overlap 4618285 TAACCATAACGATAA GGAAAAAGTAAGACA CTGC TGCCTTACTTTTCGC AAATCTTCATTTTAT TERM 6391 4618304 - 4618285 - R 89 -7.2 -4.95876 | opp_overlap 4618285, overlap 4618278 AACGATAAGGAAAAA GTAAGACA CTGC TGCCTTAC TTTTCGCAAATCTTC Dhaf_4356 4619009 - 4618377 - | CoA-binding domain protein Dhaf_4357 4619842 - 4619162 - | hypothetical protein TERM 6392 4619706 - 4619684 - G 74 -6.3 -4.37211 | overlap 4619674 CAAAGTCAGAAGAAA CTCGTTCTG ATCCA CAGAACTAG AGGAAGGTATGCCAG TERM 6393 4620134 - 4620110 - R 72 -8 -3.79396 | gap 1, opp_overlap 4620115, overlap 4620113 4620115 AATAATCATTAATAA TAAGAGGGACC TTGC GGTCCCT-TTA AAGGCTATACTAATC TERM 6394 4620132 - 4620113 - R 74 -7.8 -4.01047 | opp_overlap 4620115, overlap 4620110 4620115 AATCATTAATAATAA GAGGGACC TTGC GGTCCCTT TAAAGGCTATACTAA TERM 6395 4620115 - 4620130 + r 80 -10.4 -3.56821 | opp_overlap 4620115 4620113 4620110 TCATTAATAATAAGA GGGACC TTGC GGTCCC TTTAAAGGCTATACT TERM 6396 4620130 - 4620115 - R 82 -10.4 -3.58505 | opp_overlap 4620115, overlap 4620113 4620110 TCATTAATAATAAGA GGGACC TTGC GGTCCC TTTAAAGGCTATACT Dhaf_4358 4621166 - 4620159 - | phosphate transporter TERM 6397 4621191 - 4621179 - R 70 -7.7 -3.68325 | CATACTTCAATACAA CTCCT TTG AGGAG GTCTGCGATTTCCTC Dhaf_4359 4621785 - 4621159 - | protein of unknown function DUF47 TERM 6398 4621206 - 4621222 + g 79 -10.9 -3.5518 | GGTCTGCGATTTCCT CACACTG ATC CAGTGTG TTCTCTAAATGTTCA Dhaf_4360 4623298 - 4621919 - | FolC bifunctional protein TERM 6399 4623587 - 4623563 - R 100 -13.7 -3.85698 | TTTTCGGCGGAGAAA GGTTGGAAACA GTA CGTTTCCAACC CGCTATGAGGCAGGA TERM 6400 4623737 - 4623777 + r 95 -14.1 -2.76583 | opp_overlap 4623737 4623742, overlap 4623742 CATGTACCAAGCAAA GCAAAGGCATACCAACTTC ATA GAAGTCGGCATGCCTTTCC ATTTCACACTATTCT TERM 6401 4623777 - 4623737 - R 100 -18.5 -3.96298 | opp_overlap 4623737 4623742, overlap 4623742 CATGTACCAAGCAAA GCAAAGGCATACCAACTTC ATA GAAGTCGGCATGCCTTTCC ATTTCACACTATTCT TERM 6402 4623742 - 4623772 + r 100 -12.6 -3.84719 | opp_overlap 4623737 4623742, overlap 4623737 ACCAAGCAAAGCAAA GGCATACCAACTTC ATA GAAGTCGGCATGCC TTTCCATTTCACACT TERM 6403 4623772 - 4623742 - R 100 -17 -4.15201 | opp_overlap 4623742 4623737, overlap 4623737 ACCAAGCAAAGCAAA GGCATACCAACTTC ATA GAAGTCGGCATGCC TTTCCATTTCACACT Dhaf_4361 4626477 - 4623832 - | valyl-tRNA synthetase TERM 6404 4626562 - 4626535 - H 87 -4.8 -5.46698 | overlap 4626555 CTTAAAACCAAAAAA GCCCTCCATCCC CTAA AGGACGAAGAAC TCGCGGTACCACCTT TERM 6405 4627500 - 4627478 - g 74 -2.6 -5.01732 | AATTCGCTGAAAAAA TGGCTCAAGG GGA CCTTACGGCA ACCTTGTACAGCATG Dhaf_4362 4627174 - 4628511 + | methyl-accepting chemotaxis sensory transducer TERM 6406 4628569 - 4628529 - T 83 -11.2 -3.40907 | opp_overlap 4628534, overlap 4628531 4628533 4628534 CTATATCAACATTAA GACAGCTGAGGCAAGGGA TCTGT TCCCTTGCCTCAGTTTTT TTATTCCCTCACCAC TERM 6407 4628567 - 4628531 - T 100 -13.8 -3.26933 | opp_overlap 4628534, overlap 4628529 4628533 4628534 ATATCAACATTAAGA CAGCTGAGGCAAGGGA TCTGT TCCCTTGCCTCAGTTT TTTTATTCCCTCACC TERM 6408 4628565 - 4628533 - T 100 -16.4 -3.1917 | opp_overlap 4628534, overlap 4628531 4628529 4628534 ATCAACATTAAGACA GCTGAGGCAAGGGA TCTGT TCCCTTGCCTCAGT TTTTTTATTCCCTCA TERM 6409 4628534 - 4628564 + T 100 -19.9 -5.8187 | opp_overlap 4628533 4628531 4628529 4628534 TCAACATTAAGACAG CTGAGGCAAGGGA TCTGT TCCCTTGCCTCAG TTTTTTTATTCCCTC TERM 6410 4628564 - 4628534 - T 100 -19.9 -2.50779 | opp_overlap 4628534, overlap 4628533 4628531 4628529 TCAACATTAAGACAG CTGAGGCAAGGGA TCTGT TCCCTTGCCTCAG TTTTTTTATTCCCTC Dhaf_4363 4629978 - 4628578 - | ferredoxin-dependent glutamate synthase Dhaf_4364 4630773 - 4630078 - | hypothetical protein Dhaf_4365 4630940 - 4631629 + | Peptidoglycan-binding LysM Dhaf_4366 4632596 - 4631598 - | sodium/calcium exchanger membrane region TERM 6411 4632115 - 4632127 + g 73 -3.4 -4.85599 | opp_overlap 4632115 TCCTCAGTTCCAAGA CTGT TGCGC ACAG TTTTTATGACATAAA TERM 6412 4632253 - 4632243 - G 81 -3.2 -5.38951 | AACCCAGAGAAAAAA GGAA AGA TCCC GTTTGATAACTGTTG TERM 6413 4632319 - 4632308 - G 76 -7.2 -4.40561 | overlap 4632309 4632310 TGCGTCTAAAAATAA GCGC GGCC GCGC CGGAAACAAAAAAGG Dhaf_4367 4633320 - 4632715 - | small GTP-binding protein domain protein TERM 6414 4633395 - 4633432 + r 73 -2.6 -5.23316 | opp_overlap 4633400, overlap 4633395 4633396 CCCAACACTATCCAG GGAAATGAGACAAGGG TTCATT CCCTTGTCTCACCCCA TTTTTTCATATCATC TERM 6415 4633427 - 4633400 - R 100 -14.3 -3.67296 | opp_overlap 4633395 4633396 4633395 CACTATCCAGGGAAA TGAGACAAGGG TTCATT CCCTTGTCTCA CCCCATTTTTTCATA Dhaf_4368 4635957 - 4633543 - | ATP-dependent protease La TERM 6416 4633902 - 4633919 + g 74 -11.3 -2.77899 | opp_overlap 4633895 4633905, overlap 4633899 TGGCTAAAGCCGAAG CCATGGC TGTG GCCATGG TGATTCCTGCCGAGG TERM 6417 4634725 - 4634710 - G 78 -6.1 -4.7497 | opp_overlap 4634718 4634719 TTCATCCAGCAAAAA GACCG GATTGG CGGTC CCCGCCGTTCTCATT TERM 6418 4634718 - 4634732 + g 71 -9.2 -3.52652 | opp_overlap 4634710, overlap 4634719 GCAAAAAGACCGGAT TGGCGG TCC CCGCCG TTCTCATTCCCTGAA TERM 6419 4635115 - 4635125 + g 73 -2.4 -5.00884 | CGTCCCCTCTGAGGA AGCC TGG GGCA TTTTTTCCAACCGAT TERM 6420 4635502 - 4635526 + g 80 -6.3 -4.74801 | opp_overlap 4635502, overlap 4635503 GTTAACCCCCAGAAC CGTTCCCAGGG TTT CCTGGGGAACC TTTTTACTGAGCTTA TERM 6421 4635503 - 4635525 + g 73 -9.8 -3.44158 | opp_overlap 4635502, overlap 4635502 TTAACCCCCAGAACC GTTCCCAGGG TTT CCTGGGGAAC CTTTTTACTGAGCTT TERM 6422 4636043 - 4636024 - R 95 -7.9 -5.21709 | opp_overlap 4636023 CCTTACATGAAAAAA GCACACT GTTATT AGTGTGC CATTCTCCGTTAGAT Dhaf_4369 4637803 - 4636064 - | Sigma 54 interacting domain protein TERM 6423 4637269 - 4637254 - G 77 -4.6 -4.87665 | opp_overlap 4637261 TCTCATCGATAAAAA GCACAC CGCC GTGAGC CTTGGTAACAGCTCC TERM 6424 4637377 - 4637363 - G 74 -10 -3.46482 | overlap 4637355 AACCGAACCAATCAA GGGATC GGC GATCCC CCGCTCATCAAAACG TERM 6425 4638238 - 4638265 + H 100 -8.5 -6.09196 | opp_overlap 4638230 4638238, overlap 4638230 GGCAACACAGAAGCA CTTTCTGTCCT TTATAT AGGACGGGAAG TTTTTTTATTTTAAA TERM 6426 4638402 - 4638427 + H 100 -8.3 -5.58454 | opp_overlap 4638425, overlap 4638397 GGTGGCACCACAGAA GCTTTCTGTCC TTTG GGATGGAAGGC TTTTTTTAGTGTAAA Dhaf_4370 4638493 - 4639305 + | Indole-3-glycerol-phosphate synthase TERM 6427 4639345 - 4639335 - g 71 -8.2 -3.62597 | opp_overlap 4639318 CGCACTCGCGAAGAA GCCC GTT GGGC TGCTGAAGCCGGTGC Dhaf_4371 4639293 - 4640006 + | Phosphoribosylanthranilate isomerase Dhaf_4372 4640003 - 4641013 + | anthranilate phosphoribosyltransferase Dhaf_4373 4641047 - 4642246 + | tryptophan synthase, beta subunit Dhaf_4374 4642338 - 4643204 + | tryptophan synthase, alpha subunit TERM 6428 4643626 - 4643597 - g 78 -5.1 -4.85599 | gap 1 CCCAGTTCACAAAAA GTCATCCT-GGAGA TAT TCTCTGAAGATGAC TCGGAGCTGAGCAGG Dhaf_4375 4643195 - 4644628 + | Anthranilate synthase Dhaf_4376 4644677 - 4645270 + | glutamine amidotransferase of anthranilate synthase TERM 6429 4645322 - 4645335 + T 73 -5.3 -4.59773 | opp_overlap 4645322 GCTTTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACTAGCA TERM 6430 4645335 - 4645322 - T 70 -5.3 -4.56597 | opp_overlap 4645322 GCTTTGTCCCAAAAA CGAAA GCGC TTTCG TTTTTGGGACTAGCA TERM 6431 4645398 - 4645452 + T 100 -19.6 -3.49756 | gap 1, opp_overlap 4645404 4645405, overlap 4645402 4645404 4645405 4645418 AAGTATAGCGTTAAA GAAAAAGGGGTGCCGCAAAACGTTG ACTCAC CAACGTTTTGCGGCACCC-TCTGTC TTATGCTGATTCTTC TERM 6432 4645402 - 4645450 + T 100 -21.3 -3.31133 | gap 1, opp_overlap 4645404 4645405, overlap 4645398 4645404 4645405 4645418 ATAGCGTTAAAGAAA AAG-GGGTGCCGCAAAACGTTG ACTCAC CAACGTTTTGCGGCACCCTCTG TCTTATGCTGATTCT TERM 6433 4645447 - 4645404 - T 100 -24.8 -5.27938 | opp_overlap 4645404 4645402 4645398 4645405 4645418, overlap 4645405 AGCGTTAAAGAAAAA GGGGTGCCGCAAAACGTTGA CTCA CCAACGTTTTGCGGCACCCT CTGTCTTATGCTGAT TERM 6434 4645404 - 4645448 + T 100 -23.9 -3.21438 | gap 1, opp_overlap 4645404 4645405, overlap 4645402 4645398 4645405 4645418 AGCGTTAAAGAAAAA G-GGGTGCCGCAAAACGTTG ACTCAC CAACGTTTTGCGGCACCCTC TGTCTTATGCTGATT TERM 6435 4645405 - 4645446 + T 100 -27.6 -3.16203 | opp_overlap 4645404 4645405, overlap 4645404 4645402 4645398 4645418 GCGTTAAAGAAAAAG GGGTGCCGCAAAACGTTG ACTCAC CAACGTTTTGCGGCACCC TCTGTCTTATGCTGA TERM 6436 4645446 - 4645405 - T 100 -28.3 -3.75678 | opp_overlap 4645405 4645404 4645402 4645398 4645418, overlap 4645404 GCGTTAAAGAAAAAG GGGTGCCGCAAAACGTTGA CTCA CCAACGTTTTGCGGCACCC TCTGTCTTATGCTGA Dhaf_4377 4646718 - 4645453 - | ATP-dependent Clp protease, ATP-binding subunit ClpX Dhaf_4378 4648038 - 4646758 - | trigger factor TERM 6437 4648229 - 4648211 - R 100 -10.3 -4.49337 | GAACATGAACTAAAA GGGGAAC TCTGC GTTCCCC CTCAAAGCAGGTTTC Dhaf_4379 4649551 - 4648433 - | Monogalactosyldiacylglycerol synthase TERM 6438 4649811 - 4649834 + H 100 -12.6 -5.93252 | opp_overlap 4649814 CAATGTACTTGCAGA CAACCATAGT CTAT ACTATGGTTG TTTTTTATTTTTAAG TERM 6439 4649831 - 4649814 - H 71 -8.5 -3.49475 | opp_overlap 4649811 TGTACTTGCAGACAA CCATAGT CTAT ACTATGG TTGTTTTTTATTTTT TERM 6440 4650099 - 4650089 - g 71 -8.2 -3.65902 | TCCACTGTAGCGAAA GCCG GAC CGGC TGTAGCGACTGCTGA Dhaf_4380 4649966 - 4650412 + | hypothetical protein TERM 6441 4650428 - 4650417 - T 75 -3 -5.20216 | overlap 4650427 CAGAGCAGTAAAAAA TCTT CATG AAGA CATCTGACCGTCAGA TERM 6442 4650540 - 4650487 - T 100 -29.2 -3.74447 | opp_overlap 4650490 4650495, overlap 4650490 4650495 GAAAAAATCATAGAA CGACAAAAGAAGGCCTCCGGCAGA TTTTGC TCTGCCGGAGGCCCTCTTTTGTTG CTTGCCGGGCCGTTT TERM 6443 4650490 - 4650537 + T 100 -27.3 -3.33696 | opp_overlap 4650487 4650490 4650495, overlap 4650495 AAAATCATAGAACGA CAAAAGAAGGCCTCCGGCAGA TTTTGC TCTGCCGGAGGCCCTCTTTTG TTGCTTGCCGGGCCG TERM 6444 4650537 - 4650490 - T 100 -29.5 -2.93752 | opp_overlap 4650490 4650495, overlap 4650487 4650495 AAAATCATAGAACGA CAAAAGAAGGCCTCCGGCAGA TTTTGC TCTGCCGGAGGCCCTCTTTTG TTGCTTGCCGGGCCG TERM 6445 4650495 - 4650532 + T 100 -21.4 -4.78572 | opp_overlap 4650490 4650487 4650495, overlap 4650490 CATAGAACGACAAAA GAAGGCCTCCGGCAGA TTTTGC TCTGCCGGAGGCCCTC TTTTGTTGCTTGCCG TERM 6446 4650532 - 4650495 - T 100 -23.6 -4.60073 | opp_overlap 4650495 4650490, overlap 4650490 4650487 CATAGAACGACAAAA GAAGGCCTCCGGCAGA TTTTGC TCTGCCGGAGGCCCTC TTTTGTTGCTTGCCG TERM 6447 4650565 - 4650577 + T 71 -3.3 -4.9792 | opp_overlap 4650565, overlap 4650547 4650546 CCGTTTATTGCAACA GCCCA TTT TGCGC TTTTTGTCTAAGGTC TERM 6448 4650622 - 4650645 + T 76 -8 -4.16921 | TTTGACTTCCTATTC CCCCGAGCGT CGTC ACGACCGGGG TTTTGCCAGTTCTTA Dhaf_4381 4651229 - 4650876 - | Cupin 2 conserved barrel domain protein TERM 6449 4651424 - 4651377 - R 100 -11.5 -4.19678 | gap 2, opp_overlap 4651378 4651381, overlap 4651413 TGATAGTGCAAGAAA GGGAGCTGCACCT-TGAT-AACC TTTC GGTTGATAAAAGGAGCAGCTCCC TTGAAAAATTAGATG TERM 6450 4651423 - 4651413 - R 74 -6.8 -4.36914 | opp_overlap 4651381, overlap 4651377 TTTCGGTTGATAAAA GGAG CAG CTCC CTTGAAAAATTAGAT Dhaf_4382 4652812 - 4651433 - | D-lactate dehydrogenase (cytochrome) Dhaf_4383 4654124 - 4652832 - | FAD linked oxidase domain protein TERM 6451 4653008 - 4653028 + g 80 -8.3 -4.39828 | ACATGGCCATTTTGT TGACTTTGG CGG CCAAAGCCA TTTTATCGGCATCTT Dhaf_4384 4655422 - 4654178 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 6452 4654816 - 4654829 + g 78 -5.3 -4.86621 | opp_overlap 4654816 GTTCTTTGGGAATAA TGACT TCAC AGTCA TTTTTAGTTAACACT TERM 6453 4655582 - 4655605 + r 89 -7.5 -4.95155 | gap 1, opp_overlap 4655582 TCTTCACAAAAAAAA CGAGA-CAGG CCTAT CCTGATCTCG TTTTTGTCATCTGAC TERM 6454 4655605 - 4655582 - R 100 -7.5 -5.93809 | gap 1, opp_overlap 4655582 TCTTCACAAAAAAAA CGAGA-CAGG CCTAT CCTGATCTCG TTTTTGTCATCTGAC Dhaf_4385 4656267 - 4655629 - | hypothetical protein Dhaf_4386 4657265 - 4656492 - | transcriptional regulator, IclR family TERM 6455 4656902 - 4656913 + g 72 -5.8 -4.45083 | opp_overlap 4656901 GCATACTTACCACAT GGGA GCTT TCCC TTTTGTCAATATAGA TERM 6456 4657424 - 4657405 - R 100 -12.2 -4.9725 | ATTTTCATACAAAAA GCACTGGA TTCC TCCAGTGC TGAATACTCATATGG TERM 6457 4657513 - 4657491 - R 81 -4.1 -5.26875 | TTTCCAATGAAAAAA GACCCTAGA ATAAA TCAAGGATC TTCATAACTAGCTCA Dhaf_4387 4658451 - 4657765 - | GP21 protein TERM 6458 4657990 - 4658006 + g 71 -2.9 -4.88295 | overlap 4657991 TAGGTGCTCCTTTAA TTGATGC CTT GCTTCAG TTTTTACGTTTCTTT TERM 6459 4658782 - 4658805 + r 71 -9.6 -3.04836 | opp_overlap 4658783, overlap 4658779 TACTTAAAAAGAAAA ACGTCAGGAA GCTA TTCCTGACGC TGCTTTGTCGTAATG TERM 6460 4658804 - 4658783 - R 100 -13.1 -5.63236 | opp_overlap 4658782 4658779 ACTTAAAAAGAAAAA CGTCAGGAA GCTA TTCCTGACG CTGCTTTGTCGTAAT Dhaf_4388 4659812 - 4659186 - | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family Dhaf_4389 4660552 - 4659809 - | ribonuclease PH Dhaf_4390 4661580 - 4660657 - | hypothetical protein Dhaf_4391 4662338 - 4661652 - | O-methyltransferase family 3 TERM 6461 4662470 - 4662442 - R 75 -5.3 -4.82901 | overlap 4662444 CTTTGCCCATAAAAA CAGGACAAGGT TTGCCGT ACCTTGCCCCA CTGATTTTAAGTCAA TERM 6462 4662468 - 4662444 - R 74 -7.9 -4.03995 | overlap 4662442 TTGCCCATAAAAACA GGACAAGGT TTGCCGT ACCTTGCCC CACTGATTTTAAGTC Dhaf_4392 4663700 - 4662477 - | metal dependent phosphohydrolase Dhaf_4393 4665016 - 4663769 - | methyl-accepting chemotaxis sensory transducer TERM 6463 4665136 - 4665161 + H 80 -4.7 -5.14563 | opp_overlap 4665136 TTCATAAAACAAAAA TCCTGCAGAAT ATCT AGTCTACAGGA TTTTTTCCTAAAGGA TERM 6464 4665161 - 4665136 - H 91 -6.9 -5.54907 | opp_overlap 4665136 TTCATAAAACAAAAA TCCTGCAGAAT ATCT AGTCTACAGGA TTTTTTCCTAAAGGA TERM 6465 4666538 - 4666524 - g 73 -7.1 -4.15044 | CTGGCCCGCAAGAAA GCCCA GGATA TGGGC GGCTATGTGTATGGC TERM 6466 4666661 - 4666646 - g 87 -5.4 -5.49579 | TGATAAAAAACAAAA GGAAGA TAAT TCTCCC GGCCGGCCAGGTATG Dhaf_4394 4665798 - 4666868 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 6467 4667323 - 4667307 - g 70 -2.1 -4.97402 | overlap 4667308 CAAAATGTATAAAAA CCTCCCC GGT GTGGAGC TGCCCTATTCGCTTC Dhaf_4395 4666849 - 4667604 + | hypothetical protein TERM 6468 4667695 - 4667642 - T 100 -20.6 -3.61715 | gap 1, opp_overlap 4667654 4667657, overlap 4667644 4667645 GACGCCGGCCAAGAA TATGGTTAAGCAGAAGGCCCCGGGA ACGAA TCCCGGGGCCTTCTGCTTAAA-ATG AACTTACTCTTGCCG TERM 6469 4667693 - 4667644 - T 100 -23.2 -3.38812 | gap 1, opp_overlap 4667654 4667657, overlap 4667642 4667645 CGCCGGCCAAGAATA TGGTTAAGCAGAAGGCCCCGGGA ACGAA TCCCGGGGCCTTCTGCTTAAA-A TGAACTTACTCTTGC TERM 6470 4667693 - 4667645 - T 100 -24.8 -2.63073 | opp_overlap 4667654 4667657, overlap 4667644 4667642 GCCGGCCAAGAATAT GGTTAAGCAGAAGGCCCCGGGA ACGAA TCCCGGGGCCTTCTGCTTAAAA TGAACTTACTCTTGC TERM 6471 4667654 - 4667684 + T 100 -22.7 -2.73483 | opp_overlap 4667644 4667645 4667642, overlap 4667657 GAATATGGTTAAGCA GAAGGCCCCGGGA ACGAA TCCCGGGGCCTTC TGCTTAAAATGAACT TERM 6472 4667657 - 4667681 + T 100 -18.6 -3.51825 | opp_overlap 4667644 4667645 4667642, overlap 4667654 TATGGTTAAGCAGAA GGCCCCGGGA ACGAA TCCCGGGGCC TTCTGCTTAAAATGA Dhaf_4396 4668256 - 4667699 - | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit TERM 6473 4667921 - 4667896 - G 74 -6.8 -4.41348 | overlap 4667898 TGGCTCCGAAATAAA CCGCGCCATG CTTCTT CATGGCACTG ATCACTTCTTCAGAG TERM 6474 4668112 - 4668098 - G 70 -7.8 -3.83205 | overlap 4668099 4668103 ATTGTGTACATCAAA GGGAAG CTC CTCCCC CCGGGATAAAGCCTC Dhaf_4397 4669128 - 4668259 - | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit Dhaf_4398 4669976 - 4669176 - | CoA-substrate-specific enzyme activase Dhaf_4399 4671030 - 4670023 - | 2-hydroxyglutaryl-CoA dehydratase D-component Dhaf_4400 4672408 - 4671140 - | Methylaspartate ammonia-lyase Dhaf_4401 4673885 - 4672431 - | methylaspartate mutase, E subunit TERM 6475 4673748 - 4673763 + g 73 -3.2 -4.91109 | CTTATAGCTAAAGTT CTTGCT TCTG GGCAGG TTTTTATGATAAGCC Dhaf_4402 4675288 - 4673906 - | glutamate mutase, MutL TERM 6476 4674844 - 4674854 + g 71 -6.8 -4.17523 | opp_overlap 4674844 GCAGCGAGAAAGGCA GCTC CAG GAGC TTTTCCGCGTTCTTT Dhaf_4403 4675708 - 4675298 - | methylaspartate mutase, S subunit Dhaf_4404 4676627 - 4675740 - | glutamate racemase TERM 6477 4676709 - 4676693 - R 100 -8.7 -5.65927 | opp_overlap 4676693 4676692 TAGTCAAACAAAAAA CGAGGAA TAG CTCCTCG CTTTCACTTCATTTA Dhaf_4405 4677282 - 4676722 - | metal dependent phosphohydrolase Dhaf_4406 4677891 - 4677385 - | transcriptional regulator, MarR family TERM 6478 4678073 - 4678046 - R 93 -12.1 -3.60792 | opp_overlap 4678040 4678049 ATGACCTACATAGAA TCATCCAGGCC AATAAA AGCCTGGATGA TTAAAATAATTTCAC Dhaf_4407 4678926 - 4678207 - | hypothetical protein Dhaf_4408 4679143 - 4679949 + | two component transcriptional regulator, LytTR family TERM 6479 4679958 - 4680005 + T 100 -31 -4.59109 | opp_overlap 4679958 TCTCTAGTGAAAAAA TGGGGACAGGTACCGTTTTTCA ATTA TGAAAAGCGGTACCTGTCCCCA TTTTTCACCCCTGTC TERM 6480 4680005 - 4679958 - T 100 -28.8 -5.08824 | opp_overlap 4679958 TCTCTAGTGAAAAAA TGGGGACAGGTACCGTTTTTCA ATTA TGAAAAGCGGTACCTGTCCCCA TTTTTCACCCCTGTC Dhaf_4409 4680679 - 4680029 - | stage II sporulation protein R TERM 6481 4680744 - 4680764 + H 87 -4.7 -5.52986 | TCCAAGGTGAGTATG GGTTTAGAC ATA GTTTAATCC TTTTTTTCATAAAGT TERM 6482 4681420 - 4681443 + G 100 -10.2 -4.57837 | overlap 4681413 4681418 TTTTTCTTGCCCTGG CCGGGGGGGC TATG GCCTTCCTGG TTTTTGCGGAGCTCT Dhaf_4410 4680816 - 4681550 + | zinc/iron permease TERM 6483 4681607 - 4681555 - T 100 -38.3 -3.09516 | opp_overlap 4681559, overlap 4681559 TTCTCCACTAGTGAA TCAAGGGGACAGGTACCGTTTTTCA TAT TGAAAAACGGTACCTGTCCCCTTGA TTCACCTAATCGAGT TERM 6484 4681559 - 4681603 + T 100 -33.3 -3.36289 | opp_overlap 4681559 4681555 CCACTAGTGAATCAA GGGGACAGGTACCGTTTTTCA TAT TGAAAAACGGTACCTGTCCCC TTGATTCACCTAATC TERM 6485 4681603 - 4681559 - T 100 -33.3 -3.38316 | opp_overlap 4681559, overlap 4681555 CCACTAGTGAATCAA GGGGACAGGTACCGTTTTTCA TAT TGAAAAACGGTACCTGTCCCC TTGATTCACCTAATC Dhaf_4411 4682299 - 4681613 - | lipolytic protein G-D-S-L family TERM 6486 4682243 - 4682225 - G 75 -5.2 -4.6902 | CCATAATCCTAAAAA GCCGGCAA TCA CTACCAGC ACACTTAAAAACACC Dhaf_4412 4683453 - 4682398 - | Malate dehydrogenase TERM 6487 4683386 - 4683366 - G 71 -6.8 -4.23156 | ATATGGAAGAAACAA TTCCGGCA TCAGT TGCCGGCA CACCACTTGCTTCTA Dhaf_4413 4684235 - 4683510 - | GntR domain protein Dhaf_4414 4684834 - 4684382 - | hypothetical protein Dhaf_4415 4686338 - 4684827 - | protein of unknown function DUF112 transmembrane TERM 6488 4686381 - 4686361 - R 91 -10.4 -4.07687 | ACCTCCTTTTTAAAA GGGGCGAA TAGTC CTCGCCCC TACAACAAATCAGTT Dhaf_4416 4687404 - 4686421 - | hypothetical protein TERM 6489 4686518 - 4686529 + g 78 -5.8 -4.80882 | overlap 4686516 GGCATGTATTCCATT GGCT GCCC AGCC TTTTTCATATCCGCT TERM 6490 4686605 - 4686592 - G 73 -5.3 -4.59109 | GACATCGCGTAAAAA CTGAA GGGC TTCAG GATCTGTCCCTTTAG TERM 6491 4687386 - 4687396 + g 75 -5.4 -4.79223 | opp_overlap 4687378 4687386 CAACAAATGTTAAAA GAAC TTT GTTC TTTTTCATAATCTAA Dhaf_4417 4688911 - 4687625 - | hypothetical protein TERM 6492 4687682 - 4687692 + g 71 -6.8 -4.17048 | AACAGAGTTGGCATT CGGT AAT ACCG TTATTTTCAAACCAG Dhaf_4418 4690140 - 4688986 - | Altronate dehydratase TERM 6493 4689783 - 4689794 + g 71 -4.4 -4.66163 | overlap 4689769 GGGCTTTGCGGGAAG CCAT TTCA ATGG TTTTTAAATCACCAT Dhaf_4419 4690426 - 4690130 - | SAF domain protein Dhaf_4420 4690634 - 4691143 + | hypothetical protein Dhaf_4421 4691155 - 4691280 + | hypothetical protein TERM 6494 4691456 - 4691476 + G 76 -11.1 -3.25494 | overlap 4691451 GTGGAACTGCCTTAT GCCGGCC TGGTGGT GGCCGGC TTGGATATTCTTATG TERM 6495 4691723 - 4691737 + G 78 -11.4 -3.09516 | opp_overlap 4691722 4691721 TCCCTCTCCATAAGC GGTCCC TTT GGGACC TTCGATGGTACACCG Dhaf_4422 4691309 - 4691887 + | hypothetical protein Dhaf_4423 4691884 - 4692093 + | hypothetical protein TERM 6496 4692122 - 4692099 - T 100 -11 -4.68209 | overlap 4692114 ATGCCAATAAAGAAA GGAGCTCAGC TATA ACCGAGCTCC CTCTGACCCCAAAAC Dhaf_4424 4693184 - 4692186 - | hypothetical protein TERM 6497 4693263 - 4693293 + r 79 -10.7 -3.09635 | gap 1, opp_overlap 4693262 4693260 4693272, overlap 4693268 AGGTAGAAATGATAT TTGAATCA-AGGGA CCTG TCCCTCTGATTCAA TTAGATGCTAAAGGT Dhaf_4425 4694154 - 4693294 - | cell wall hydrolase SleB TERM 6498 4693431 - 4693418 - G 74 -9.5 -3.53012 | TCTTCGCCGTTTAAA GCGGC CTCT GCCGC ACGATAAGCACTTTG TERM 6499 4693698 - 4693659 - G 74 -9.2 -3.68936 | gap 1, opp_overlap 4693659 4693657 4693660, overlap 4693660 GAGTAACTTGAATAA CCGGAGCTCTGCCGCGGGA TGG TTCCGCGGCTGAA-TCCGC TATTGTCTCTCCTTT TERM 6500 4693660 - 4693697 + g 81 -12.7 -2.63113 | gap 1, opp_overlap 4693659 4693660, overlap 4693659 4693657 AGTAACTTGAATAAC CGGAGCTCTGCCGCGGGA TGG TTCCGCGGCTGAA-TCCG CTATTGTCTCTCCTT TERM 6501 4693697 - 4693660 - G 81 -12.7 -2.80879 | gap 1, opp_overlap 4693660 4693659 4693657, overlap 4693659 AGTAACTTGAATAAC CGGAGCTCTGCCGCGGGA TGG TTCCGCGGCTGAA-TCCG CTATTGTCTCTCCTT TERM 6502 4694346 - 4694288 - R 100 -12.7 -4.41817 | gap 1, opp_overlap 4694290 4694294 4694295, overlap 4694282 4694290 4694295 CAAAACAACCCAAAA TAGTACAGGGGCTGTCCCCT-TACTTTT TGCC AAAAGTATAGGAAACAGCCCCCATTCTC ATCAATCACATATTA TERM 6503 4694290 - 4694310 + r 74 -6.2 -4.57073 | gap 1, opp_overlap 4694282 4694288 4694290 4694295, overlap 4694294 4694295 AAACAACCCAAAATA GTACAGGGG CTGT CCCCT-TAC TTTTTGCCAAAAGTA TERM 6504 4694344 - 4694290 - R 100 -15.3 -3.78677 | gap 1, opp_overlap 4694290 4694294 4694295, overlap 4694282 4694288 4694295 AAACAACCCAAAATA GTACAGGGGCTGTCCCCT-TACTTTT TGCC AAAAGTATAGGAAACAGCCCCCATTC TCATCAATCACATAT TERM 6505 4694294 - 4694340 + r 74 -10.3 -2.65298 | gap 1, opp_overlap 4694282 4694290 4694288 4694295, overlap 4694290 4694295 AACCCAAAATAGTAC AGGGGCTGTCCCCT-TACTTTT TGCC AAAAGTATAGGAAACAGCCCCC ATTCTCATCAATCAC TERM 6506 4694339 - 4694295 - R 100 -18.2 -3.02187 | gap 1, opp_overlap 4694290 4694294 4694295, overlap 4694282 4694290 4694288 ACCCAAAATAGTACA GGGGCTGTCCCCT-TACTTTT TGCC AAAAGTATAGGAAACAGCCCC CATTCTCATCAATCA TERM 6507 4694295 - 4694306 + r 70 -7.2 -3.80855 | opp_overlap 4694282 4694295 4694290 4694288, overlap 4694290 4694294 ACCCAAAATAGTACA GGGG CTGT CCCC TTACTTTTTGCCAAA Dhaf_4426 4694697 - 4694359 - | MazG nucleotide pyrophosphohydrolase Dhaf_4427 4696413 - 4694749 - | carboxyl-terminal protease TERM 6508 4695150 - 4695136 - G 71 -6.4 -4.25283 | opp_overlap 4695136 4695138 ATGTCGCCAGGAAAA TCCTCC GGG GAAGGA GTTGTTTTGAATAAG Dhaf_4428 4697684 - 4696479 - | A/G-specific adenine glycosylase TERM 6509 4696711 - 4696684 - G 73 -7.6 -3.967 | gap 1, opp_overlap 4696693, overlap 4696685 4696687 AATGTATGAACTAAA GGACCCTGCCGGC TGG GCCGGC-GGCTCA GCAGTTCCTGCACAG TERM 6510 4696710 - 4696685 - G 74 -11.1 -2.97297 | gap 1, opp_overlap 4696693, overlap 4696684 4696687 ATGTATGAACTAAAG GACCCTGCCGGC TGG GCCGGC-GGCTC AGCAGTTCCTGCACA TERM 6511 4696693 - 4696715 + g 76 -11.2 -3.14344 | opp_overlap 4696687 4696685 4696684 ACTAAAGGACCCTGC CGGCTGGGCC GGC GGCTCAGCAG TTCCTGCACAGCCTC TERM 6512 4696930 - 4696945 + g 71 -4.6 -4.63932 | opp_overlap 4696931, overlap 4696931 CACAAATCAGCCAAA AGCCCT GTGG AGGGCC TTTTCTTCAGGAGTA TERM 6513 4696944 - 4696931 - G 75 -8.1 -4.26681 | opp_overlap 4696930 4696931 ACAAATCAGCCAAAA GCCCT GTGG AGGGC CTTTTCTTCAGGAGT TERM 6514 4697742 - 4697721 - R 93 -10.1 -4.33928 | opp_overlap 4697737 GACTTTAAAGAGAAA TCCCGAGGA TTAA CCCCCGGGA CCCAGTCTATCCATT Dhaf_4429 4698665 - 4697778 - | D-amino-acid transaminase TERM 6515 4698741 - 4698715 - R 100 -10.9 -5.21506 | overlap 4698716 ATAATAACACAAAAA CCCCCAAAGCA CACGC TGCTTTGGGGT GAGTAACCCAGCCCT TERM 6516 4698740 - 4698716 - R 100 -14.4 -3.70463 | overlap 4698715 TAATAACACAAAAAC CCCCAAAGCA CACGC TGCTTTGGGG TGAGTAACCCAGCCC TERM 6517 4699182 - 4699154 - R 86 -9 -4.25104 | opp_overlap 4699155 4699157 CGTTTTTCATCAAAA TGAGACAAGG TTCCTGTCC CCTTGTCTCA TTGCCCAGCCTTATT Dhaf_4430 4701118 - 4699193 - | methyl-accepting chemotaxis sensory transducer TERM 6518 4700869 - 4700851 - G 74 -11 -2.79327 | overlap 4700850 CGATTTTATCTAAAT CCTGCCGA TCC TCGGCAGA CAAGTGCTCATTCTC Dhaf_4431 4701452 - 4701150 - | anti-sigma-factor antagonist Dhaf_4432 4701921 - 4701472 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Dhaf_4433 4703087 - 4701975 - | putative PAS/PAC sensor protein Dhaf_4434 4703372 - 4703716 + | hypothetical protein TERM 6519 4704562 - 4704548 - g 90 -7.8 -5.06735 | GATAAAGTAGAAAAA GGCGAC CTC ATCGCC TATAGCGGCAACTCC Dhaf_4435 4703747 - 4704673 + | Peptidase M23 Dhaf_4436 4704678 - 4705241 + | protein of unknown function DUF583 TERM 6520 4705245 - 4705282 + F 93 -10.7 -4.07687 | gap 1, opp_overlap 4705247 4705248 4705250, overlap 4705247 4705248 4705250 CGGCGCAGATAATCA AATGAGTGTCACCGACTG CTT CAGT-GGTGACACTCCTC TTTTACCAGCAAAAT TERM 6521 4705247 - 4705280 + F 100 -13.3 -3.63744 | gap 1, opp_overlap 4705247 4705248 4705250, overlap 4705245 4705248 4705250 GCGCAGATAATCAAA TGAGTGTCACCGACTG CTT CAGT-GGTGACACTCC TCTTTTACCAGCAAA TERM 6522 4705280 - 4705247 - f 100 -13.3 -4.04174 | gap 1, opp_overlap 4705247 4705245 4705248 4705250, overlap 4705248 4705250 GCGCAGATAATCAAA TGAGTGTCACCGACTG CTT CAGT-GGTGACACTCC TCTTTTACCAGCAAA TERM 6523 4705248 - 4705279 + F 100 -16.8 -2.78032 | gap 1, opp_overlap 4705247 4705248 4705250, overlap 4705247 4705245 4705250 CGCAGATAATCAAAT GAGTGTCACCGACTG CTT CAGT-GGTGACACTC CTCTTTTACCAGCAA TERM 6524 4705279 - 4705248 - f 100 -16.8 -3.02023 | gap 1, opp_overlap 4705248 4705247 4705245 4705250, overlap 4705247 4705250 CGCAGATAATCAAAT GAGTGTCACCGACTG CTT CAGT-GGTGACACTC CTCTTTTACCAGCAA TERM 6525 4705250 - 4705277 + F 100 -13.6 -2.93623 | gap 1, opp_overlap 4705248 4705247 4705250, overlap 4705248 4705247 4705245 CAGATAATCAAATGA GTGTCACCGACTG CTT CAGT-GGTGACAC TCCTCTTTTACCAGC TERM 6526 4705277 - 4705250 - f 100 -13.6 -3.05935 | gap 1, opp_overlap 4705250 4705248 4705247 4705245, overlap 4705248 4705247 CAGATAATCAAATGA GTGTCACCGACTG CTT CAGT-GGTGACAC TCCTCTTTTACCAGC TERM 6527 4705771 - 4705761 - g 80 -6.8 -4.78149 | GCCAGAACCCAAAAA GCAG CCA CTGC CCAGGATGCCCGTTT TERM 6528 4706638 - 4706624 - g 70 -2 -4.87803 | opp_overlap 4706626, overlap 4706625 4706626 4706633 GATCGTTAAACAAAA CGGCCA AAA TGGCTA TATAGCTACTGCCAC TERM 6529 4706701 - 4706689 - g 71 -9.1 -3.53811 | overlap 4706693 GGCAGGTCGTGGAAA CCCAG AGC CTGGG CAGAAGCTCCTATAT Dhaf_4437 4705416 - 4706927 + | VanW family protein TERM 6530 4706969 - 4706995 + T 80 -3.8 -5.31545 | gap 1, opp_overlap 4706964 4706969 AGAGTTAAAAGAAAA GAATCCG-CTA CCTGAA TGGTCGGATTC TTTTTTAATCTTATT TERM 6531 4706995 - 4706969 - T 71 -2.4 -5.11836 | gap 2, opp_overlap 4706969, overlap 4706964 AGAGTTAAAAGAAAA GAATCCGCTACC TGAAT GGT--CGGATTC TTTTTTAATCTTATT Dhaf_4438 4707523 - 4707044 - | hypothetical protein Dhaf_4439 4708830 - 4707538 - | metal dependent phosphohydrolase Dhaf_4440 4709157 - 4708924 - | transcriptional regulator, XRE family Dhaf_4441 4709308 - 4709679 + | transcriptional regulator, XRE family TERM 6532 4709690 - 4709724 + T 76 -10.9 -2.66435 | opp_overlap 4709695, overlap 4709695 AATAAGTCCATAAGC CAAAACCTCACGTTT ATAAA AAGCGTGAGGTTTTC TAGTATCCTGACAGT TERM 6533 4709695 - 4709719 + T 100 -10.8 -4.52047 | opp_overlap 4709695, overlap 4709690 GTCCATAAGCCAAAA CCTCACGTTT ATAAA AAGCGTGAGG TTTTCTAGTATCCTG TERM 6534 4709719 - 4709695 - T 82 -8.6 -4.3208 | opp_overlap 4709695 4709690 GTCCATAAGCCAAAA CCTCACGTTT ATAAA AAGCGTGAGG TTTTCTAGTATCCTG Dhaf_4442 4710563 - 4709748 - | aminotransferase class IV Dhaf_4443 4712831 - 4710666 - | para-aminobenzoate synthase, subunit I TERM 6535 4712952 - 4712982 + r 91 -8.4 -4.72272 | opp_overlap 4712952 TCTTAATGAACGAAA GGACAATTTGGA AGTTGAG TCCAAATTGCCC TTTTTAATAAGCAGC TERM 6536 4712982 - 4712952 - R 89 -10.6 -4.00348 | opp_overlap 4712952 TCTTAATGAACGAAA GGACAATTTGGA AGTTGAG TCCAAATTGCCC TTTTTAATAAGCAGC Dhaf_4444 4713373 - 4713014 - | hypothetical protein TERM 6537 4713834 - 4713817 - g 71 -8.5 -3.6959 | opp_overlap 4713817 AGACGACGACTTAAA TTCCCAA GCGC TTGGGAA TTTAACCTACACTCA Dhaf_4445 4713551 - 4714414 + | hypothetical protein TERM 6538 4714681 - 4714664 - g 71 -8.5 -3.6959 | opp_overlap 4714664 AGATGACGATCCAAA TTCCCAA GCGC TTGGGAA TTTAACCTACACTAA Dhaf_4446 4714476 - 4715048 + | hypothetical protein TERM 6539 4715155 - 4715202 + F 100 -28.9 -5.14563 | opp_overlap 4715171 CTCCAGCCCCCCTTA GTTTGCCTATCCCAAATCGGA CACGAA TCCGATTTGGGATAGGCAAAC TTTTTTAGTGACAAA TERM 6540 4715721 - 4715736 + G 90 -9 -4.5123 | AGGAAGGGGCTGTGG CTGCTG TCAA CAGCAG TTTCTTTAATCCGTT TERM 6541 4716345 - 4716325 - g 73 -10.3 -3.23899 | overlap 4716320 CTTTAATCAACGGAA CCCCCGGAC CAT GGCCGGGAG TACTGAAGATGGGAG Dhaf_4447 4715420 - 4718161 + | Ig-like, group 2 Dhaf_4448 4718733 - 4719062 + | hypothetical protein Dhaf_4449 4720791 - 4719097 - | ATP-dependent endonuclease of the OLD family-like protein TERM 6542 4720159 - 4720149 - G 71 -4 -4.72272 | opp_overlap 4720149 TGTGCTCAGGAAAAA TATC CCC GATA TTATCTTGAAGTTTG TERM 6543 4721223 - 4721178 - R 100 -19.3 -4.88736 | opp_overlap 4721193, overlap 4721180 GACCACTTACAAAAA TCTGCCCATCTAAAATCGGAC ACGA ATCCGATTTTGGATGGGCAAA CTAAGGGCGGCAAGC TERM 6544 4721221 - 4721180 - R 100 -19.7 -2.70788 | opp_overlap 4721193, overlap 4721178 CCACTTACAAAAATC TGCCCATCTAAAATCGGAC ACGA ATCCGATTTTGGATGGGCA AACTAAGGGCGGCAA Dhaf_4450 4722435 - 4721239 - | hypothetical protein Dhaf_4452 4724216 - 4723719 - | transposase IS3/IS911 family protein Dhaf_4453 4724608 - 4724396 - | hypothetical protein Dhaf_4454 4725079 - 4724612 - | VanZ family protein TERM 6545 4725100 - 4725121 + r 81 -7.3 -4.72986 | opp_overlap 4725102, overlap 4725102 TCTATCTCCAAGATC AATCCCCAT AGCC ATGGGGATG TTTTTGATGCCACTG TERM 6546 4725119 - 4725102 - R 76 -9.9 -3.36749 | opp_overlap 4725100 4725102 TATCTCCAAGATCAA TCCCCAT AGCC ATGGGGA TGTTTTTGATGCCAC TERM 6547 4725102 - 4725119 + r 86 -9.9 -3.98256 | opp_overlap 4725102, overlap 4725100 TATCTCCAAGATCAA TCCCCAT AGCC ATGGGGA TGTTTTTGATGCCAC Dhaf_4455 4726090 - 4725098 - | UDP-glucose 4-epimerase TERM 6548 4725695 - 4725708 + g 71 -6.7 -4.183 | CTCTGGGTGGGACTC TTCCG GAAT CGGAA TTTCTTCAGGATTGC TERM 6549 4726138 - 4726117 - R 100 -12.3 -3.88464 | opp_overlap 4726115 4726114 4726117 GGAAAAATAGTCAAA CCCAACCAC ATTA GTGGCTGGG TAATTTTTGGTGCAA TERM 6550 4726117 - 4726138 + r 76 -10.1 -3.28472 | opp_overlap 4726117, overlap 4726115 4726114 GGAAAAATAGTCAAA CCCAACCAC ATTA GTGGCTGGG TAATTTTTGGTGCAA Dhaf_4456 4726593 - 4726171 - | hypothetical protein Dhaf_4457 4726966 - 4726772 - | hypothetical protein Dhaf_4458 4727077 - 4728405 + | transposase Dhaf_4459 4728571 - 4730151 + | transposase IS1634 family protein Dhaf_4460 4730756 - 4730157 - | hypothetical protein TERM 6551 4730894 - 4730863 - R 93 -11.8 -3.67052 | opp_overlap 4730860 ATATTCGGAACATAA TTACGTTTATGTTC TTAC GCACATAAACGTAA GAATTGGCTTTTTTC TERM 6552 4731159 - 4731181 + r 87 -8.4 -4.4784 | TAGGAGGAAGACTGA CCCGCATC GTAATTA GGTGCGGG TTTATTTGACGTTTA TERM 6553 4731924 - 4731907 - R 78 -9.1 -3.75437 | overlap 4731908 AATGAGTCGATCAAA CTGGCGG CAGC CCGCCAA TCACCATACCCTGAG TERM 6554 4731923 - 4731908 - R 75 -10.4 -2.8478 | overlap 4731907 ATGAGTCGATCAAAC TGGCGG CAGC CCGCCA ATCACCATACCCTGA Dhaf_4462 4734460 - 4732640 - | Rhamnan synthesis F TERM 6555 4734213 - 4734189 - G 71 -10.1 -2.80492 | opp_overlap 4734189 4734188 4734187 4734191, overlap 4734186 4734191 TAGCACGAGCAATTA CAGAGTATCAC CTC GTCATACTCTG ATATTTCTTCCCCTT TERM 6556 4734189 - 4734213 + g 71 -10.1 -2.8136 | opp_overlap 4734186 4734189 4734191, overlap 4734188 4734187 4734191 TAGCACGAGCAATTA CAGAGTATCAC CTC GTCATACTCTG ATATTTCTTCCCCTT Dhaf_4463 4735329 - 4734472 - | NAD-dependent epimerase/dehydratase Dhaf_4464 4736961 - 4735330 - | Methyltransferase type 12 TERM 6557 4735483 - 4735463 - G 71 -9.1 -3.57239 | opp_overlap 4735463 4735460, overlap 4735460 ACCGAAAGATTATAA TTGTGACGT AGT ACATCACAA TCATTCTTTGCTTTT TERM 6558 4736783 - 4736803 + g 83 -6.9 -4.84527 | opp_overlap 4736783 4736787, overlap 4736787 TCAAATTCTACGATA TAAACTTGG CAC CCCAGTTTA TTTTTCATATATCGC TERM 6559 4736787 - 4736799 + g 73 -3.3 -4.94262 | opp_overlap 4736783 4736787, overlap 4736783 ATTCTACGATATAAA CTTGG CAC CCCAG TTTATTTTTCATATA Dhaf_4465 4738992 - 4737043 - | ABC transporter related Dhaf_4466 4740438 - 4739002 - | ABC-2 type transporter TERM 6560 4739071 - 4739044 - G 72 -10.8 -2.60496 | gap 1, opp_overlap 4739049, overlap 4739043 4739046 4739049 TGTTTTTTTAAATAT GATAATTCCCACT GTA AG-GGGAATTATC GCGGCCAACAGACAT Dhaf_4467 4741373 - 4740510 - | dTDP-4-dehydrorhamnose reductase Dhaf_4468 4743047 - 4742034 - | dTDP-glucose 4,6-dehydratase TERM 6561 4742773 - 4742762 - G 83 -2.2 -5.53991 | TAGTTAGTAAAAAAA CAGA TGGA TCCG CGATAGAACGATCCA Dhaf_4470 4744686 - 4744573 - | hypothetical protein Dhaf_4471 4745248 - 4744688 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 6562 4744843 - 4744813 - G 70 -7.6 -3.94634 | opp_overlap 4744815, overlap 4744815 GATCATTCCAAATAA TACTTCTATCGGCC TCT GGACAATAGAAGTT ATCCGCTTTATATAA TERM 6563 4744841 - 4744815 - G 77 -10.2 -3.55946 | opp_overlap 4744815, overlap 4744813 TCATTCCAAATAATA CTTCTATCGGCC TCT GGACAATAGAAG TTATCCGCTTTATAT Dhaf_4472 4746138 - 4745260 - | glucose-1-phosphate thymidylyltransferase Dhaf_4473 4747084 - 4746155 - | glycosyl transferase family 2 Dhaf_4474 4747953 - 4747081 - | glycosyl transferase family 2 Dhaf_4475 4749334 - 4747943 - | Undecaprenyl-phosphate glucose phosphotransferase TERM 6564 4748184 - 4748172 - G 93 -4.7 -5.60993 | opp_overlap 4748182 TGTTCTACAAAAAAA GGACG CTC CGGCC TGGGTCCCACCAGAC TERM 6565 4748633 - 4748643 + g 73 -2.4 -5.02476 | CGGAACGATTTGAGT GCGG ACA CCAC TTTTTTCACAGATCT Dhaf_4476 4749674 - 4751386 + | Ig domain protein group 2 domain protein TERM 6566 4751493 - 4751445 - T 100 -19.8 -3.07895 | opp_overlap 4751448, overlap 4751448 TCTATTTGCAACACA CAACAGCCCCCTATGGTAGATG CTTGC CGTCTATCATAGGGGGCTGTTA TTATGAGACCTACTT TERM 6567 4751490 - 4751448 - T 100 -19.3 -3.68292 | opp_overlap 4751448, overlap 4751445 ATTTGCAACACACAA CAGCCCCCTATGGTAGATG CTTGC CGTCTATCATAGGGGGCTG TTATTATGAGACCTA TERM 6568 4751448 - 4751490 + T 100 -23.7 -3.7941 | opp_overlap 4751445 4751448 ATTTGCAACACACAA CAGCCCCCTATGGTAGATG CTTGC CGTCTATCATAGGGGGCTG TTATTATGAGACCTA TERM 6569 4752596 - 4752585 - T 82 -3 -5.45726 | GAGAGTTGAAAAAAA CTTT GGGG AAAG TTAAAAAAGGCTAAT TERM 6570 4752638 - 4752680 + T 100 -15.7 -4.70453 | gap 1, opp_overlap 4752640, overlap 4752640 CTTTGCGACATAAAA AAGGAGCCCTAATCCCAGCA TTCA TGC-GGGTTTAGGGCTCCTC TTTTGTCTATTAATT TERM 6571 4752640 - 4752678 + T 100 -18.3 -3.94954 | gap 1, opp_overlap 4752640, overlap 4752638 TTGCGACATAAAAAA GGAGCCCTAATCCCAGCA TTCA TGC-GGGTTTAGGGCTCC TCTTTTGTCTATTAA TERM 6572 4752678 - 4752640 - T 100 -18.3 -5.36441 | gap 1, opp_overlap 4752640 4752638 TTGCGACATAAAAAA GGAGCCCTAATCCCAGCA TTCA TGC-GGGTTTAGGGCTCC TCTTTTGTCTATTAA Dhaf_4478 4754560 - 4752734 - | O-antigen polymerase Dhaf_4479 4755759 - 4754572 - | hypothetical protein Dhaf_4480 4756941 - 4755823 - | hypothetical protein Dhaf_4481 4758904 - 4756991 - | Ig domain protein Dhaf_4482 4761327 - 4758940 - | putative cell wall binding repeat 2-containing protein TERM 6573 4760260 - 4760230 - G 74 -9.6 -3.54638 | overlap 4760237 AGAACGGGCGGCAAA GACCGAACCGGACA GAG CGTCCGGATAGGCC TCCCCTGTCGCCACA TERM 6574 4760253 - 4760237 - G 73 -10.1 -3.24021 | overlap 4760230 GCGGCAAAGACCGAA CCGGACA GAG CGTCCGG ATAGGCCTCCCCTGT TERM 6575 4761541 - 4761558 + r 73 -8.5 -3.61398 | CCATACAGTCCTTTG CCTAACT CCAA AGTTAGG TTATTACGAAGAAAC TERM 6576 4761563 - 4761608 + r 81 -11.2 -3.3676 | opp_overlap 4761569 4761573, overlap 4761567 4761573 CCAAAGTTAGGTTAT TACGAAGAAACCTGGCCGCT CATAAA AGAGGCCAGGTTTCTCTGGA TTATCGAATCTTAAG TERM 6577 4761567 - 4761604 + r 91 -12.8 -2.60257 | opp_overlap 4761569 4761573, overlap 4761563 4761573 AGTTAGGTTATTACG AAGAAACCTGGCCGCT CATAAA AGAGGCCAGGTTTCTC TGGATTATCGAATCT TERM 6578 4761602 - 4761569 - R 100 -16.1 -3.21747 | opp_overlap 4761567 4761563 4761573, overlap 4761573 TTAGGTTATTACGAA GAAACCTGGCCGCTC ATAA AAGAGGCCAGGTTTC TCTGGATTATCGAAT TERM 6579 4761573 - 4761598 + r 91 -10.4 -4.10179 | opp_overlap 4761569 4761573, overlap 4761567 4761563 GTTATTACGAAGAAA CCTGGCCGCT CATAAA AGAGGCCAGG TTTCTCTGGATTATC TERM 6580 4761598 - 4761573 - R 100 -11.1 -4.2704 | opp_overlap 4761573 4761567 4761563, overlap 4761569 GTTATTACGAAGAAA CCTGGCCGCTC ATAA AAGAGGCCAGG TTTCTCTGGATTATC Dhaf_4483 4765084 - 4761677 - | putative cell wall binding repeat 2-containing protein TERM 6581 4764918 - 4764937 + g 74 -4.2 -4.90296 | opp_overlap 4764913 GCAGCAACAACTGCG GTGTCTGC AGAA GCATACGC TTTTTCTGCGATTTT TERM 6582 4765293 - 4765281 - R 80 -10.5 -3.55563 | opp_overlap 4765283 ATCCCACCCCTTAAA GGGGG CGT CCCCC CTGAGAGGCTTACGC TERM 6583 4765293 - 4765316 + r 73 -10.2 -2.56046 | overlap 4765283 AAAGGGGGCGTCCCC CCTGAGAGGC TTAC GCCTCGCGGG TGGCTTACCCTTTAG TERM 6584 4765443 - 4765423 - R 78 -5.5 -5.02476 | ATATCTCCGAAAAAA TTTCTTAGA AAA TCTTAGAAA ATCTCGGAGTTAAGA Dhaf_4484 4767193 - 4765562 - | N-acetylmuramoyl-L-alanine amidase TERM 6585 4767478 - 4767445 - R 100 -14.7 -3.43218 | opp_overlap 4767449 4767450, overlap 4767449 CACAATTAACATGAA GAAACCTGGCCACTC TCAT GAGCGACCAGATTTC TCTAACTTTATCGAG TERM 6586 4767474 - 4767449 - R 93 -9.7 -4.33755 | opp_overlap 4767449 4767450, overlap 4767445 ATTAACATGAAGAAA CCTGGCCACTC TCAT GAGCGACCAGA TTTCTCTAACTTTAT TERM 6587 4767486 - 4767512 + r 82 -10.2 -3.61902 | overlap 4767489 CAGATTTCTCTAACT TTATCGAGGGAG ACC TTCCCTCGATCA TTATCTATCGTAGAC TERM 6588 4767489 - 4767509 + r 86 -11.9 -2.92712 | overlap 4767486 ATTTCTCTAACTTTA TCGAGGGAG ACC TTCCCTCGA TCATTATCTATCGTA Dhaf_4485 4767745 - 4767578 - | hypothetical protein Dhaf_4486 4768058 - 4767846 - | hypothetical protein Dhaf_4487 4768273 - 4768127 - | hypothetical protein TERM 6589 4768376 - 4768363 - H 78 -5.3 -5.04385 | GATATTCTCAAAAAA GTTAG ATTT CTAAC ACCTCCTTGTTTCAG Dhaf_4488 4768624 - 4769766 + | filamentation induced by cAMP protein Fic TERM 6590 4769789 - 4769808 + F 100 -5.7 -5.75342 | opp_overlap 4769789 AGAATAACTCTGAAA GCATCTG TTTATT CAGGTGC TTTTTTTTAACCCAA Dhaf_4489 4770112 - 4772178 + | glycoside hydrolase family 18 TERM 6591 4772200 - 4772239 + T 100 -10.9 -4.42653 | gap 2, opp_overlap 4772193 4772200 AATCCAAATAGATAA GGGAGTGTCGTTGGCTGCT TCAC AGCAGCT-G-GACACTCCC TTTTATAACTCCAAT Dhaf_4490 4772394 - 4772242 - | hypothetical protein Dhaf_4491 4772571 - 4772834 + | prevent-host-death family protein Dhaf_4492 4772824 - 4773144 + | addiction module toxin, RelE/StbE family TERM 6592 4773158 - 4773178 + F 71 -4.6 -4.65895 | opp_overlap 4773158 AAGGTGTAGGCAAAA GCCGTCTT TCATT ATGGCGGC TTTTTAGCTCACGCC TERM 6593 4773503 - 4773483 - g 73 -8.1 -4.08767 | GTGATTGCCTTAAAA GCCTGTGGC ATA GCCCCTGGC GATGAAGTGATCACC TERM 6594 4773900 - 4773910 + G 71 -6.8 -4.2828 | overlap 4773888 TTGGCCGCGGAGGCC CGCA TGC TGCG TTTTCATGGCTGCCA Dhaf_4493 4773276 - 4774388 + | Glutamine--scyllo-inositol transaminase TERM 6595 4775450 - 4775479 + G 73 -7.1 -4.14243 | gap 1 TGGATCGTTGGGGAG TCGCCG-TGGGGAG CAT CTCCCAATCGCCGA TTTTGGGCTGGGGTA TERM 6596 4775599 - 4775613 + G 73 -8.6 -3.95073 | AGCTTCTTCCTCCTG CCCTTT ATC AAAGGG TTTATGCATCTGAGA Dhaf_4494 4774486 - 4775829 + | hypothetical protein Dhaf_4495 4775849 - 4777033 + | glycosyl transferase group 1 TERM 6597 4777443 - 4777430 - f 74 -4.5 -4.90525 | GAACCTTAAATAAAA CTCCA AAAA CGGAG GTAAACACCTTTGAA Dhaf_4496 4777454 - 4778578 + | glycosyl transferase group 1 TERM 6598 4779659 - 4779647 - g 78 -9.1 -4.05026 | overlap 4779644 GCCAAATGCAAAGAA CCCTG GTT CAGGG GCTGGCTCTGCTGCT Dhaf_4497 4778584 - 4780002 + | polysaccharide biosynthesis protein TERM 6599 4780365 - 4780378 + G 78 -5.9 -4.6856 | TGTAAAGGAAATCCT GCGCC TCCT GGTGC TTTTTGCCGTGTTTC TERM 6600 4780912 - 4780930 + G 80 -7.4 -4.59773 | CAACGCTTATACCTC TGGCAAGC CGG GATTGCCA TTTTTACGGATCACC Dhaf_4498 4780006 - 4781349 + | O-antigen polymerase TERM 6601 4782115 - 4782101 - g 81 -10 -4.05033 | opp_overlap 4782090 CCCACGGTATAGAAA CCGCTT TGG AAGCGG CGGATATCTTACGAA TERM 6602 4782133 - 4782147 + G 71 -4.2 -4.72007 | opp_overlap 4782133 GATATCTTACGAAAT GATGAG GAG CTCTTC TTTCTTTTCGTGGGA Dhaf_4499 4781380 - 4782606 + | glycosyl transferase group 1 TERM 6603 4782705 - 4782720 + G 71 -4.6 -4.56597 | overlap 4782707 TGGATTAAAGTGGAT TCGCCG GGCC CGGCTA TTTTTCGCCAGCAGC TERM 6604 4782869 - 4782837 - g 73 -2.1 -5.06451 | opp_overlap 4782842, overlap 4782842 GAGCAGCTGAAAAAA GAAGGCAAATTCA ATGCGGA TGAATTTGTTTTC CAGGAAAAAGATGAT Dhaf_4500 4782606 - 4783217 + | Undecaprenyl-phosphate galactose phosphotransferase TERM 6605 4783226 - 4783266 + T 88 -9.2 -4.35483 | opp_overlap 4783228 4783229, overlap 4783229 GTATTAAGCAAAGAA AAGCGACCTTATTCTACT TTTGC AGTACAATAAGGTCGTTC TTTATTATCGTACAA TERM 6606 4783264 - 4783228 - T 100 -9.6 -5.00851 | opp_overlap 4783226 4783229, overlap 4783229 ATTAAGCAAAGAAAA GCGACCTTATTCTACT TTTGC AGTACAATAAGGTCGT TCTTTATTATCGTAC TERM 6607 4783229 - 4783263 + T 100 -13.1 -4.29119 | opp_overlap 4783229 4783228, overlap 4783226 TTAAGCAAAGAAAAG CGACCTTATTCTACT TTTGC AGTACAATAAGGTCG TTCTTTATTATCGTA TERM 6608 4783263 - 4783229 - T 100 -13.1 -3.58884 | opp_overlap 4783226 4783229, overlap 4783228 TTAAGCAAAGAAAAG CGACCTTATTCTACT TTTGC AGTACAATAAGGTCG TTCTTTATTATCGTA Dhaf_4501 4784688 - 4783300 - | ATPase TERM 6609 4784019 - 4784029 + g 91 -4 -5.55769 | opp_overlap 4784012, overlap 4784012 ATAAAAAGCTGGCTC TATC CAG GATA TTTTTTCTTATAGCC TERM 6610 4784110 - 4784124 + g 91 -6.4 -5.24003 | ACCCGTCACCGCATA GAGTTC GAT GAGCTC TTTTTCGTTTTTGTT TERM 6611 4784744 - 4784708 - R 75 -9.1 -3.62775 | opp_overlap 4784708 4784722, overlap 4784722 ACTACCTCCCAAGAA TATTATACCCCAAATTA TTA TAATTTAAAGTATAATA ATTTATTTATGATTT TERM 6612 4784841 - 4784805 - R 86 -6 -5.31275 | gap 1 TTGGAGTACAAAAAA GTCAAGAGACG-ACTCA ACTA CAAGTACATCCCTTGAC TTTTTTATCGATATA Dhaf_4502 4785829 - 4784861 - | UDP-3-O-(3-hydroxymyristoyl)-like protein Dhaf_4503 4786984 - 4785947 - | oxidoreductase domain protein TERM 6613 4787075 - 4787089 + r 81 -7.2 -4.64861 | AGCATTCATGATGGC CTTCAT GGG ATGAAG TTTCTTTTAAAAAGG TERM 6614 4787122 - 4787103 - R 100 -12.2 -4.56775 | opp_overlap 4787098 AGTTTCTTTTAAAAA GGGGAATC TTGC GATTCCCC TTAAGCTTTAGGACT Dhaf_4504 4788534 - 4787179 - | nucleotide sugar dehydrogenase TERM 6615 4787470 - 4787484 + g 77 -2.8 -5.26316 | GGCCGGTGACTCACG GACATC GTC GATATC TTTTTTATAGGCTAC Dhaf_4505 4790382 - 4788550 - | polysaccharide biosynthesis protein CapD TERM 6616 4789311 - 4789335 + g 70 -7.8 -3.87815 | gap 1 GGACATGTTTATGGG CCGCGGCGTGG AACA CCACACC-CGG TTTATAGCGCTGGAA Dhaf_4506 4792392 - 4790533 - | putative cell wall binding repeat 2-containing protein TERM 6617 4791970 - 4791984 + g 80 -6.4 -4.72272 | CCCGTCCCCGATGGT TGGTGT AAA ACGCCA TTTTTCATCGAGAAG TERM 6618 4792522 - 4792486 - R 100 -14.6 -4.08557 | opp_overlap 4792486 4792485, overlap 4792487 CTGCGGAAATAATAA GGCCTGGTTCTGTTCT GCCGA AGAACAAAACCAGGCG ATTCGTGGCGTGCTT TERM 6619 4792486 - 4792522 + r 86 -12.4 -2.50291 | opp_overlap 4792486 4792487, overlap 4792485 CTGCGGAAATAATAA GGCCTGGTTCTGTTCT GCCGA AGAACAAAACCAGGCG ATTCGTGGCGTGCTT TERM 6620 4792521 - 4792487 - R 100 -18.1 -3.04652 | opp_overlap 4792486 4792485, overlap 4792486 TGCGGAAATAATAAG GCCTGGTTCTGTTCT GCCGA AGAACAAAACCAGGC GATTCGTGGCGTGCT Dhaf_4507 4792971 - 4792561 - | hypothetical protein TERM 6621 4793013 - 4792999 - R 72 -7.2 -4.0274 | CCCATCACTAAACAA TTGGTA TTC TACCAA GCCCATTTTAGCAAA TERM 6622 4793093 - 4793047 - R 100 -13.9 -4.02535 | gap 1, opp_overlap 4793048 4793085, overlap 4793050 TCATAACGAATGAAA CAGGCCCAGCCATTGATTCCTA AATT TAGAAACCGACGGCTGGGC-TG AACGCCTAGCTTATA TERM 6623 4793091 - 4793050 - R 100 -16.7 -2.74696 | opp_overlap 4793048 4793085, overlap 4793047 TAACGAATGAAACAG GCCCAGCCATTGATTCCTA AATT TAGAAACCGACGGCTGGGC TGAACGCCTAGCTTA Dhaf_4508 4793877 - 4793134 - | hypothetical protein Dhaf_4509 4794696 - 4794031 - | protein of unknown function DUF1648 Dhaf_4510 4795074 - 4794730 - | transcriptional regulator, ArsR family TERM 6624 4795211 - 4795268 + r 100 -20.9 -2.53018 | opp_overlap 4795222 4795226, overlap 4795212 4795222 4795226 ATCTGGTGCATCTGT CCCGTCTTAAAGAAACAAGACCTGACC CGTC GGTCAGATCTTGTTTCTTTAAAGCGCG CATTATTTTCATTTT TERM 6625 4795212 - 4795270 + r 74 -6.39999 -4.44748 | gap 3, opp_overlap 4795222 4795226, overlap 4795211 4795222 4795226 TCTGGTGCATCTGTC -CCGT-C-TTAAAGAAACAAGACCTGACC CGTC GGTCAGATCTTGTTTCTTTAAAGCGCGCA TTATTTTCATTTTAT TERM 6626 4795222 - 4795257 + r 100 -17.8 -3.53343 | opp_overlap 4795222 4795226, overlap 4795211 4795212 4795226 CTGTCCCGTCTTAAA GAAACAAGACCTGACC CGTC GGTCAGATCTTGTTTC TTTAAAGCGCGCATT TERM 6627 4795257 - 4795222 - R 100 -20 -3.53012 | opp_overlap 4795222 4795211 4795212 4795226, overlap 4795226 CTGTCCCGTCTTAAA GAAACAAGACCTGACC CGTC GGTCAGATCTTGTTTC TTTAAAGCGCGCATT TERM 6628 4795253 - 4795226 - R 100 -15 -4.41348 | opp_overlap 4795222 4795211 4795212 4795226, overlap 4795222 CCCGTCTTAAAGAAA CAAGACCTGACC CGTC GGTCAGATCTTG TTTCTTTAAAGCGCG TERM 6629 4795226 - 4795253 + r 100 -12.8 -4.41348 | opp_overlap 4795226 4795222, overlap 4795222 4795211 4795212 CCCGTCTTAAAGAAA CAAGACCTGACC CGTC GGTCAGATCTTG TTTCTTTAAAGCGCG Dhaf_4511 4795702 - 4795529 - | hypothetical protein Dhaf_4512 4796470 - 4795745 - | hypothetical protein TERM 6630 4796090 - 4796080 - G 80 -6.8 -4.73388 | AAGCTGCACCAAAAA CCAG ATT CTGG GCATCTTGGCTCAAG TERM 6631 4796696 - 4796682 - R 100 -11.4 -5.1675 | opp_overlap 4796682 TTATGGAGCAAAAAA GAGGGC TAT GCCCTC TTTAAAAATCACGTT TERM 6632 4796682 - 4796696 + r 90 -11.4 -3.5764 | opp_overlap 4796682 TTATGGAGCAAAAAA GAGGGC TAT GCCCTC TTTAAAAATCACGTT Dhaf_4513 4796795 - 4796667 - | hypothetical protein Dhaf_4514 4797672 - 4796788 - | UTP-glucose-1-phosphate uridylyltransferase TERM 6633 4797838 - 4797808 - R 100 -17.8 -5.0133 | opp_overlap 4797806 4797804 4797803 4797800 GAGTTGGGTAAAAAA GTGAAGCAAGAGAA TAG TTCCCTTGCTTCAC AATGGTTCTTATTTT Dhaf_4515 4798455 - 4797847 - | ATP-dependent Clp protease, proteolytic subunit ClpP Dhaf_4516 4799455 - 4798598 - | methyl-accepting chemotaxis sensory transducer TERM 6634 4799516 - 4799498 - R 76 -6.8 -4.41548 | GTACATGCTATAAAA GAATATTC AGA GAATATCC TAACTAATATTCGGC TERM 6635 4799662 - 4799633 - R 100 -13.7 -3.72051 | opp_overlap 4799625 4799635, overlap 4799635 GCCAATAATGCGAAA GAGCAGTGCAAAC CGAA GTTTGCACTGCTT AAGTCCCAACTTTTT TERM 6636 4799635 - 4799660 + r 100 -16.3 -3.06312 | opp_overlap 4799633 4799635, overlap 4799625 CAATAATGCGAAAGA GCAGTGCAAAC CGAA GTTTGCACTGC TTAAGTCCCAACTTT TERM 6637 4799660 - 4799635 - R 100 -16.3 -3.43751 | opp_overlap 4799635 4799625, overlap 4799633 CAATAATGCGAAAGA GCAGTGCAAAC CGAA GTTTGCACTGC TTAAGTCCCAACTTT Dhaf_4517 4801039 - 4799735 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 6638 4799976 - 4799992 + g 76 -2.1 -5.22312 | opp_overlap 4799966 AAGGATCCGGCCATG CCGCAGC AAC GATCCGG TTTTTTCATCTCAAT TERM 6639 4800922 - 4800941 + g 77 -4.8 -5.0065 | TGATTTTCCCCCGTG CCACCGAG ACTT CCCGGCGG TTTTCTTTGTAGATG Dhaf_4518 4802429 - 4801041 - | FAD linked oxidase domain protein Dhaf_4519 4802794 - 4803516 + | GntR domain protein TERM 6640 4803566 - 4803534 - T 100 -20.8 -3.55622 | opp_overlap 4803534 4803539, overlap 4803517 4803539 CTTAACTTGGTCAAA TGAAAGAGGAGGGC GCTTT GCCCTCCTCTTTCA TTTAATAACTCAGGT TERM 6641 4803534 - 4803566 + T 100 -21.5 -3.76402 | opp_overlap 4803517 4803534 4803539, overlap 4803539 CTTAACTTGGTCAAA TGAAAGAGGAGGGCG CTT TGCCCTCCTCTTTCA TTTAATAACTCAGGT TERM 6642 4803561 - 4803539 - T 100 -14.9 -4.05788 | opp_overlap 4803534 4803539, overlap 4803534 CTTGGTCAAATGAAA GAGGAGGGC GCTTT GCCCTCCTC TTTCATTTAATAACT TERM 6643 4803539 - 4803561 + T 100 -15.6 -4.10953 | opp_overlap 4803539 4803534, overlap 4803534 CTTGGTCAAATGAAA GAGGAGGGCG CTT TGCCCTCCTC TTTCATTTAATAACT TERM 6644 4803599 - 4803575 - T 70 -7.9 -3.67597 | overlap 4803579 4803590 TCTTTCATTTAATAA CTCAGGTGAAT CAT ATTCACCTAGG ATGAATCACGGGACC Dhaf_4520 4806761 - 4803630 - | acriflavin resistance protein Dhaf_4521 4807897 - 4806758 - | efflux transporter, RND family, MFP subunit Dhaf_4522 4808621 - 4808046 - | transcriptional regulator, TetR family Dhaf_4523 4808727 - 4808623 - | hypothetical protein Dhaf_4524 4810208 - 4808910 - | protein of unknown function DUF445 Dhaf_4525 4811447 - 4810224 - | protein of unknown function DUF445 TERM 6645 4810845 - 4810857 + g 80 -4.7 -5.1101 | opp_overlap 4810833 AAGGTTGTCCAGCAG GGCGG CAA CAGCC TTTTTTCCCTCCTGG TERM 6646 4811597 - 4811576 - R 85 -7.3 -4.77036 | gap 1, opp_overlap 4811576 4811578 4811585 TCGGAGTATGAAAAA GACCTTCTCC AAA GGAGA-GGCC TTAGTTTTTTACTAA TERM 6647 4811585 - 4811601 + r 71 -2.2 -5.1675 | opp_overlap 4811576, overlap 4811578 4811576 GAAAAAGACCTTCTC CAAAGG AGAGG CCTTAG TTTTTTACTAACTCA Dhaf_4526 4812532 - 4811609 - | beta-lactamase domain protein Dhaf_4527 4812685 - 4812846 + | hypothetical protein TERM 6648 4812850 - 4812877 + T 100 -18.6 -5.28942 | opp_overlap 4812847 GACGGCATTTAAGGT GAGACGGTCATG AATC CATGACCGTCTC TTTTTATTTAGCCTG Dhaf_4528 4815052 - 4812968 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 6649 4813973 - 4814023 + g 74 -11.2 -2.87132 | gap 2, opp_overlap 4813973 CACTTCGCCGATCAA GCCGCGGCCG-GGA-GGTATTGCT AAGGC AGCAGTCCCCTCCACTGCCGTGGC TGTCTCCCCGGAAGC Dhaf_4529 4816471 - 4815131 - | acetyl-CoA hydrolase/transferase TERM 6650 4816258 - 4816234 - G 72 -10.7 -2.74196 | opp_overlap 4816233, overlap 4816233 TGAAATGCACACAAT CCCAGGTGAAA TGC TCTCCCCTGGG GTCTGCTTTAACGAC Dhaf_4530 4818416 - 4816641 - | acyl-CoA dehydrogenase domain protein TERM 6651 4817028 - 4817042 + g 71 -4.2 -4.70266 | opp_overlap 4817028 TCCGGCGGCCATTAA GCAAAG CTT CTTAGC TTTTTGAGTCATATT TERM 6652 4818438 - 4818468 + r 100 -11.9 -4.05322 | opp_overlap 4818448, overlap 4818427 4818439 TGCTCCTCTCTCTGA GTGGGACAGAGGG ACAGG TCCTCTGTCCCAA TTTCTGTCCCCATTT TERM 6653 4818439 - 4818467 + r 100 -15.4 -3.0247 | opp_overlap 4818448, overlap 4818427 4818438 GCTCCTCTCTCTGAG TGGGACAGAGGG ACAGG TCCTCTGTCCCA ATTTCTGTCCCCATT TERM 6654 4818466 - 4818448 - R 75 -10.3 -2.88544 | opp_overlap 4818427 4818439 4818438 TCTGAGTGGGACAGA GGGACAG GTCCT CTGTCCC AATTTCTGTCCCCAT TERM 6655 4818580 - 4818598 + r 75 -10.3 -2.88544 | AATGCGGGTCTCTAT GGGACAG TTCAC CTGTCCC TGTGTCCCACTACAG Dhaf_4531 4819762 - 4818608 - | acetyl-CoA acetyltransferase TERM 6656 4819024 - 4819076 + g 73 -5.4 -4.56775 | gap 2, overlap 4819020 4819026 4819074 ACATAAGGAGGGTGG CCGCGGCGCCGTCACTGGTCTGAGAG GAG TTCCCCG-CC-GTGACGCAGCCGCCG TTTTTGAAAGCCGGT Dhaf_4532 4822163 - 4819776 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 6657 4819927 - 4819940 + g 73 -2.3 -5.09895 | overlap 4819928 ACATCGCCGCCGGTC ATGGC ATAA GCCAG TTTTTTCCCTAAGTG TERM 6658 4820780 - 4820790 + g 71 -4.6 -4.56314 | GGGAGAAGGAATAGG GGCT GGC GGCC TTTTCCTTATATTCG Dhaf_4533 4822892 - 4822299 - | transcriptional regulator, TetR family Dhaf_4534 4824025 - 4823039 - | Electron transfer flavoprotein alpha/beta-subunit TERM 6659 4823319 - 4823293 - G 73 -10 -3.34895 | opp_overlap 4823292 4823304 GGTATCCGGAATCAA CGGCTGCCCGGG AAG CCCCGACAGCGG CTCCTATGGTATCGG TERM 6660 4823341 - 4823357 + g 83 -9.5 -4.16921 | TGGTATCGGCAAGGT CTTCAAG GAT CTTGAAG TTTTCCGCATTCTTC Dhaf_4535 4824865 - 4824083 - | Electron transfer flavoprotein alpha/beta-subunit TERM 6661 4824772 - 4824749 - G 76 -9 -3.83026 | opp_overlap 4824748 4824749 CTCTTCCACAGCAAA CTCATCATAA GGAT TCATGATGAG ATTTACCCCGGTCGA TERM 6662 4824891 - 4824908 + H 89 -7.1 -4.95758 | opp_overlap 4824895 CTTTCTCCTCATCCA TGAATGA ATAC TCATTCA TTTTTATAATATAAT TERM 6663 4825697 - 4825682 - g 71 -10.4 -2.90496 | opp_overlap 4825693 TTGCCCTGGAAATTA TGGCGG CCAT CCGCCA GGGAGTGGGGCCTGA TERM 6664 4825720 - 4825746 + G 71 -6.5 -4.15044 | overlap 4825693 GGGCCTGACTTCCCT GTCGTTGTCCG GATTG CGGGCCATGAC TTTATTCCGGGGGGA Dhaf_4536 4825075 - 4827123 + | NADH:flavin oxidoreductase/NADH oxidase TERM 6665 4827175 - 4827163 - f 72 -7.7 -3.8721 | overlap 4827161 TACACTAAATAAATA GGGTT GCC AACCC ATGAGAGGGGTAAGA TERM 6666 4827243 - 4827230 - g 79 -3.7 -5.26918 | opp_overlap 4827231, overlap 4827231 ACAGTGGAGAAAAAA GGGGC TATT GCCCT GGTTACTTTAAACCG TERM 6667 4827716 - 4827728 + G 77 -10.5 -3.47387 | GATGCCCAGGAGGCG GCCCG TAT CGGGC TTGTGGATATTTTGG TERM 6668 4827939 - 4827926 - g 79 -2.3 -5.48063 | ACGGAAGACAAAAAA GAGGC CGTC GACTC CATCCTTGAAAAACG Dhaf_4537 4827194 - 4827979 + | Enoyl-CoA hydratase/isomerase TERM 6669 4828001 - 4828014 + T 71 -2.3 -5.13016 | opp_overlap 4828001 4828002, overlap 4828002 ACAAGGGTGAATCAA GGGGA CAGG TCCCG TTTTTCATTTTAATT TERM 6670 4828092 - 4828135 + T 100 -17.7 -5.54907 | gap 1, opp_overlap 4828092 GATCAGGCAAAAAAA GCGGATGAAG-CATGTGAAC ACGCC GTACACATGGCTTCATCCGC TTTTTCTTTTATGCC TERM 6671 4828135 - 4828092 - T 100 -18.4 -5.48825 | gap 1, opp_overlap 4828092 GATCAGGCAAAAAAA GCGGATGAAG-CATGTGAACA CGC CGTACACATGGCTTCATCCGC TTTTTCTTTTATGCC Dhaf_4538 4828899 - 4828144 - | protein of unknown function DUF1568 TERM 6672 4828683 - 4828696 + g 73 -4.5 -4.72029 | overlap 4828676 TTTTCATCGCCCTGC CGAGG GGCT CCTTG TTTTCTTGAATTAGA TERM 6673 4828998 - 4828954 - R 100 -20.3 -5.24129 | opp_overlap 4828955 4828956, overlap 4828957 GCTTCCTACAAAAAA CAAGGACAGGTACCATTTTTC TTT GAAAAATGGTACCTGTCCCCT TGATTCGATTATGCA TERM 6674 4828955 - 4828997 + r 100 -19.4 -3.41978 | opp_overlap 4828954 4828957, overlap 4828956 CTTCCTACAAAAAAC AAGGACAGGTACCATTTTTC TTT GAAAAATGGTACCTGTCCCC TTGATTCGATTATGC TERM 6675 4828956 - 4828996 + r 100 -22.9 -2.64705 | opp_overlap 4828954 4828957, overlap 4828955 TTCCTACAAAAAACA AGGACAGGTACCATTTTTC TTT GAAAAATGGTACCTGTCCC CTTGATTCGATTATG TERM 6676 4828995 - 4828957 - R 100 -26.4 -4.72201 | opp_overlap 4828956 4828955, overlap 4828954 TCCTACAAAAAACAA GGACAGGTACCATTTTTC TTT GAAAAATGGTACCTGTCC CCTTGATTCGATTAT Dhaf_4539 4830656 - 4829007 - | hybrid cluster protein TERM 6677 4830834 - 4830847 + r 71 -2.3 -5.18355 | opp_overlap 4830835, overlap 4830835 ATCAAGGTGAATCAA AGGGA CAGG TCCCG TTTTTCATTTTTGAA TERM 6678 4830835 - 4830878 + r 100 -31.4 -3.90856 | opp_overlap 4830835 4830866, overlap 4830834 TCAAGGTGAATCAAA GGGACAGGTCCCGTTTTTCA TTTT TGAAAAACGGGACCTGTCCC TTTGATTCACCCCTT TERM 6679 4830878 - 4830835 - R 100 -31.4 -3.93369 | opp_overlap 4830834 4830835, overlap 4830866 TCAAGGTGAATCAAA GGGACAGGTCCCGTTTTTCA TTTT TGAAAAACGGGACCTGTCCC TTTGATTCACCCCTT Dhaf_4540 4831283 - 4830897 - | response regulator receiver protein TERM 6680 4831016 - 4831030 + g 73 -2.1 -5.10163 | overlap 4831017 CTGTTAAGGCGCTGG TCAAG ACAAC CTTGG TTTTATTTTCCGGTT Dhaf_4541 4833954 - 4831264 - | multi-sensor hybrid histidine kinase TERM 6681 4831382 - 4831401 + g 76 -9.4 -3.89524 | GCGGCCAGTTCAATC TTAAAGGC CAGG GCCTTTAA TTTATGGGCTCCGAT TERM 6682 4832767 - 4832779 + g 71 -9.1 -3.51825 | ACTTTTGGCCCGATT GGCTG CTT CAGCC TTCTCCTTGGCCTGC Dhaf_4542 4834577 - 4833972 - | transcriptional regulator, TetR family Dhaf_4543 4836642 - 4834651 - | methyl-accepting chemotaxis sensory transducer Dhaf_4544 4838456 - 4836666 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 6683 4837047 - 4837016 - G 72 -5.9 -4.42238 | CCACGGCAACCAAAA TGCCGATCTCC TGAAGTTTTT GCAGATCGGCA ATGACCTTCTTGGCA TERM 6684 4837203 - 4837218 + g 71 -6.8 -4.21768 | GATGGATACTTTAAG GGGAGG CAGT CCTTCC TTTTGCCATTGCTTA Dhaf_4545 4838876 - 4838679 - | putative phage regulatory protein Dhaf_4546 4839144 - 4839566 + | transcriptional regulator, XRE family TERM 6685 4839591 - 4839612 + T 74 -10.3 -2.71011 | overlap 4839593 TTATTTTTAGCCGCA TATGTGGAA AGTT TTCCACATA TAATTAAACCGCCCT TERM 6686 4839639 - 4839621 - T 100 -12.4 -4.06361 | opp_overlap 4839621 CCACATATAATTAAA CCGCCCTC AAG GAGAGCGG TTTTTCGTATTGGTT TERM 6687 4839621 - 4839639 + T 100 -10.2 -4.90136 | opp_overlap 4839621 CCACATATAATTAAA CCGCCCTC AAG GAGAGCGG TTTTTCGTATTGGTT TERM 6688 4839730 - 4839702 - T 100 -13.2 -4.48713 | TTGATGAATAATAAA GGGACTAAACCC ATTCA GGGTCCAGTCCC TCCAAAAGCTTATAA Dhaf_4547 4840512 - 4839766 - | diguanylate cyclase TERM 6689 4840430 - 4840420 - G 71 -6.8 -4.16668 | CCAATAAATAAAATA GGCT AAG AGCC ACAGTAAGATACCCA TERM 6690 4840751 - 4840727 - R 82 -8.6 -4.30995 | overlap 4840724 4840728 CTCCTGATAAAAGAA TGCCAGCAAA AATTA TTTGCTGGCC TGAACATTCTTATTG TERM 6691 4840750 - 4840728 - R 86 -12.1 -3.18115 | overlap 4840727 4840724 TCCTGATAAAAGAAT GCCAGCAAA AATTA TTTGCTGGC CTGAACATTCTTATT Dhaf_4548 4841542 - 4840778 - | ABC transporter related TERM 6692 4841165 - 4841176 + g 79 -2.2 -5.4477 | opp_overlap 4841151, overlap 4841151 4841163 TTCCTTGGCTACAGG GATG ATCT CGTC TTTTTTTACCCCTTT Dhaf_4549 4842220 - 4841561 - | polar amino acid ABC transporter, inner membrane subunit TERM 6693 4842242 - 4842291 + r 100 -13.6 -3.4617 | opp_overlap 4842247, overlap 4842247 TCTCCTCATGAGTTT TCAAAGGGTAGGGAGCGCCTCT ATGCCA GGAGGCGTTCCCTACCCTTCCC TTGGTTCCTGTTACT TERM 6694 4842286 - 4842247 - R 100 -19.4 -3.56092 | opp_overlap 4842242 4842247 TCATGAGTTTTCAAA GGGTAGGGAGCGCCTC TATGCCAG GAGGCGTTCCCTACCC TTCCCTTGGTTCCTG TERM 6695 4842247 - 4842286 + r 100 -22.3 -3.24613 | opp_overlap 4842247, overlap 4842242 TCATGAGTTTTCAAA GGGTAGGGAGCGCCTCT ATGCCA GGAGGCGTTCCCTACCC TTCCCTTGGTTCCTG Dhaf_4550 4843126 - 4842302 - | extracellular solute-binding protein family 3 TERM 6696 4843256 - 4843270 + r 76 -2.8 -5.26247 | ATGCTTATGATTTCG TCCTTT TTT ATAGGA TTTTATTTATTTTCA Dhaf_4551 4844077 - 4843283 - | ABC transporter related TERM 6697 4843831 - 4843796 - G 76 -9 -3.83502 | opp_overlap 4843830 GATGGTCATATCAAA GGCAGTGCCTTTGAGG GGAT CCTGAAAAACTCTGCC AATCATCCTGGAACG Dhaf_4552 4845012 - 4844095 - | inner-membrane translocator TERM 6698 4844811 - 4844785 - G 91 -11.5 -4.03234 | TTTGGTGTAGAGAAA GGCGGCGATGC ACCCG GCACCGCAGCC AAAAACAAAGGCCAG TERM 6699 4844834 - 4844821 - G 70 -2.3 -4.89063 | GCAGCCAAAAACAAA GGCCA GCAG CAGCC CGAGGAAAGGGTGGC Dhaf_4553 4846056 - 4845067 - | protein of unknown function DUF534 TERM 6700 4845118 - 4845137 + g 79 -3.6 -5.27477 | gap 1, overlap 4845121 GTCTTCCGGGATGGT TATGCCGAT GGT ATCGGC-TG TTTTTTGATTGAGGT TERM 6701 4845121 - 4845135 + g 83 -10 -4.26777 | overlap 4845118 TTCCGGGATGGTTAT GCCGAT GGT ATCGGC TGTTTTTTGATTGAG TERM 6702 4846203 - 4846170 - R 100 -18.3 -5.01811 | overlap 4846198 GTACCAAAGCAAAAA CGCCTGCCCCTAAGT CAAA ACTTAAGGACAGGCG TATAACCTGCGGTAC Dhaf_4554 4847488 - 4846493 - | diguanylate cyclase with PAS/PAC sensor TERM 6703 4847128 - 4847138 + g 73 -3.2 -4.89852 | TTGATCTGACCCAAA TGGT GCT GCCA TTTTTATGGATATAG Dhaf_4555 4848713 - 4847700 - | NMT1/THI5 like domain protein TERM 6704 4848561 - 4848545 - G 81 -7.9 -4.56597 | CTTCTTCTTCAAAAA GGCCTTG AGA CAGGGCC ACATATTGGGGTGCA TERM 6705 4848598 - 4848610 + g 78 -7.7 -4.31379 | ATGGAATGGGTGACC TCCGA GAC TCGGA TTTTGGTGAGTTGGT Dhaf_4556 4849530 - 4848727 - | binding-protein-dependent transport systems inner membrane component TERM 6706 4849451 - 4849473 + g 71 -2.6 -4.87807 | opp_overlap 4849446 4849451, overlap 4849457 ATGATCAGAATTAAA GCCTGAGTCA CTC TGACTTTGAC TTTTTCCTGTCTTAC Dhaf_4557 4850290 - 4849523 - | ABC transporter related TERM 6707 4850440 - 4850396 - R 100 -33.2 -5.32608 | opp_overlap 4850396 AAAAAAGTGAAAAAA GGGGACAGGTCCCGCTTTTC GTTCT GAAAAGCGGGACCTGTCCCC TTTTTTCATCCTTTT TERM 6708 4850396 - 4850440 + r 100 -33.9 -5.25656 | opp_overlap 4850396 AAAAAAGTGAAAAAA GGGGACAGGTCCCGCTTTTCG TTC TGAAAAGCGGGACCTGTCCCC TTTTTTCATCCTTTT Dhaf_4558 4851129 - 4850461 - | ABC transporter related Dhaf_4559 4851821 - 4851129 - | molybdate ABC transporter, inner membrane subunit TERM 6709 4851927 - 4851870 - R 78 -5.8 -4.77157 | opp_overlap 4851925, overlap 4851871 4851873 4851875 GGAAGTCAGTAAAAA CCATAGGTATAATCAGCCTCAGCA AGAAAAACAA TGCCAAGACCGATTATACCTTTAA ATGCACTGTATTTGT TERM 6710 4851922 - 4851875 - R 74 -10.1 -3.20218 | overlap 4851873 4851871 4851870 TCAGTAAAAACCATA GGTATAATCAGCCTCAGCA AGAAAAACAA TGCCAAGACCGATTATACC TTTAAATGCACTGTA Dhaf_4560 4852820 - 4851981 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Dhaf_4561 4853203 - 4854210 + | DNA binding domain protein, excisionase family TERM 6711 4854236 - 4854265 + T 100 -7.8 -5.58179 | opp_overlap 4854236 GGCCTAATAGTTAAA GCCAGCCCCCTT AGCTTG AAGAGGACTGGC TTTTTTGTTGTGCTG TERM 6712 4854265 - 4854236 - T 100 -12.2 -3.76373 | opp_overlap 4854236 GGCCTAATAGTTAAA GCCAGCCCCCTT AGCTTG AAGAGGACTGGC TTTTTTGTTGTGCTG Dhaf_4562 4854643 - 4854347 - | transcriptional regulator, XRE family Dhaf_4563 4855010 - 4854651 - | protein of unknown function DUF891 Dhaf_4564 4856454 - 4855219 - | aminotransferase class I and II TERM 6713 4856636 - 4856648 + r 78 -4.1 -5.08824 | CCGTCTTTTTGCAAC TCTTC CCT GAGGA TTTTTTCCCTGGAAA TERM 6714 4856684 - 4856718 + r 83 -10.7 -3.40867 | opp_overlap 4856684 TGAGTGAATTCTAAA CGCCCTAGTCCCACT TTTAT GGTGAGGTTAGGGCG TTGCTTGGTCGATGG TERM 6715 4856718 - 4856684 - R 70 -7.8 -3.6715 | opp_overlap 4856684 TGAGTGAATTCTAAA CGCCCTAGTCCCAC TTTTATG GTGAGGTTAGGGCG TTGCTTGGTCGATGG Dhaf_4565 4859346 - 4856845 - | diguanylate cyclase and metal dependent phosphohydrolase TERM 6716 4859250 - 4859275 + g 73 -2.5 -5.14163 | opp_overlap 4859250 AGAGAAAATCAATAA CTCCGTTGAGG TATT CTTCAAGAGAG TTTTTATTGCTGAGT TERM 6717 4859375 - 4859387 + r 72 -7.7 -3.76048 | TCACGGTAATGATCC TCTGG TTG CCAGA TTCTATTGATTCCCA TERM 6718 4859550 - 4859525 - R 100 -14.9 -5.46698 | overlap 4859540 TTTAAAACCAAAAAA GCTTGAGATTC AAAT GAATCTCAAGC AAGATCCTCCAGCCC Dhaf_4566 4860900 - 4859584 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 6719 4861124 - 4861094 - R 95 -5.5 -5.77988 | gap 1, overlap 4861096 ATATAGATAAAAAAA TAGGGAACTGTCCC CAAA AGGAT-GTTCCCTA TGCCCGCTTGGCTAA TERM 6720 4861107 - 4861096 - R 73 -5.8 -4.51477 | overlap 4861094 ATAGATAAAAAAATA GGGA ACTG TCCC CAAAAGGATGTTCCC Dhaf_4567 4861715 - 4861170 - | Rubrerythrin TERM 6721 4861332 - 4861344 + g 75 -3.4 -5.16841 | GTATTCCGCTTCCAC TCTC ATTTC GAGA TTTTTCTTGGTATCG TERM 6722 4861371 - 4861391 + g 76 -8.3 -4.11371 | ATCGGCCACGACCAC TTCGCCTAA AAG TTCGGCGAA TTTTGCAGCGTGTTC TERM 6723 4861918 - 4861883 - R 100 -16.4 -4.7657 | opp_overlap 4861883 TAAAAACCGCAAAAA GATGGAGCTATAAGTC TTGG GACTCATAACTCCATC TTATCTTAAAAGAAA TERM 6724 4861883 - 4861918 + r 93 -12 -3.65812 | opp_overlap 4861883 TAAAAACCGCAAAAA GATGGAGCTATAAGTC TTGG GACTCATAACTCCATC TTATCTTAAAAGAAA Dhaf_4568 4862836 - 4861967 - | anaerobic dimethyl sulfoxide reductase subunit C Dhaf_4569 4863397 - 4862858 - | dimethylsulfoxide reductase, chain B TERM 6725 4863307 - 4863317 + g 83 -4.6 -5.19879 | opp_overlap 4863301 GATAACGAACGCCGA CGGC TGA GTCG TTTTTATCTTTACAG Dhaf_4570 4865999 - 4863414 - | molybdopterin oxidoreductase TERM 6726 4864303 - 4864318 + g 75 -7.6 -4.30014 | overlap 4864294 TCCGCTAATTCGTAA GCGATA CGAA TATCGC TTTTCGCTTCATAGA TERM 6727 4865221 - 4865231 + g 73 -2.4 -5.0538 | opp_overlap 4865221 TCGATGAAAACAAAT TCCG CTC CGGC TTTTTTGGCCTGGAG TERM 6728 4865361 - 4865375 + g 75 -5.7 -4.56597 | TTGCTCCATGAATCC TTCGG CCATA CCGAA TTTTTCAGGACCCCA TERM 6729 4865721 - 4865737 + g 78 -5.1 -5.00616 | ATAGTCGGGAGTATC CTGGTGA GTG TCATCGG TTTTTTGACGAACCA Dhaf_4571 4866717 - 4866016 - | cytoplasmic chaperone TorD family protein TERM 6730 4866906 - 4866866 - R 100 -17.1 -4.74013 | opp_overlap 4866858 4866879 4866905, overlap 4866857 4866905 TGGAAATACAGAAAA GCTGTAGTCAGAAGAAATG TAT CCTTTCTTTTGACTACAGC CTTGAAGATTCCATG Dhaf_4572 4867472 - 4866924 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 6731 4867216 - 4867183 - G 73 -9.5 -3.28712 | opp_overlap 4867204 TGGGGCGCCCCATAA GGGCAGGCTCCCACA CAGG TTTGGCAGCCTGCAC AGCGATTGGAATCGA TERM 6732 4867350 - 4867380 + g 76 -7.5 -4.47007 | gap 1, overlap 4867353 4867354 TTCGCCGGTGTTGGT GAC-GCGGCGCCAG GATA CTCCCGCCGCTGTC TTGTTTTCATTTTTG TERM 6733 4867354 - 4867378 + g 70 -7.7 -3.79527 | overlap 4867353 4867350 CCGGTGTTGGTGACG CGGCGCCAGGA TAC TCCCGCCGCTG TCTTGTTTTCATTTT Dhaf_4573 4869502 - 4867469 - | molybdopterin oxidoreductase TERM 6734 4867523 - 4867505 - G 75 -5.8 -4.56607 | opp_overlap 4867504 CCAGGAATCATAAAA GGCTGCCC CGC GGGCTCCC GTCGTATGAATCCCC TERM 6735 4868431 - 4868447 + g 72 -5.8 -4.3129 | AATGGATAATATTGA GGCTTC GCACA GAGGCC TTTTCCTGCTCAGTG TERM 6736 4868447 - 4868474 + g 100 -10.6 -4.8048 | GCTTCGCACAGAGGC CTTTTCCTGCTC AGTG GGGCGGGGAAAG TTTTTAATATGAAGG Dhaf_4574 4870728 - 4869505 - | transcriptional regulator, CdaR TERM 6737 4870774 - 4870792 + r 73 -5.4 -4.67641 | opp_overlap 4870774, overlap 4870775 GATTATTATACACTA TTTTAGAA TTA TTCTAAAG TTTTGATTTTCCACT Dhaf_4575 4871601 - 4870945 - | Protein of unknown function DUF1847 TERM 6738 4871105 - 4871123 + g 77 -3 -5.2189 | overlap 4871106 CCCACACATAGCCCT ACGATCAC ATT GAGATCGG TTTTTTCCTCATTGA Dhaf_4576 4871892 - 4871725 - | hypothetical protein TERM 6739 4871916 - 4871958 + r 90 -11.4 -3.72695 | gap 3, opp_overlap 4871919 ATCCCCCTATGTCAA GCAG-CGGCAAGGCTCCGGGT CATG ACCCGGT-CCT-GCCGTCTGC TTTGATAGGGGAAAT TERM 6740 4872014 - 4871980 - R 77 -5 -4.99134 | gap 1, opp_overlap 4871980 AGGGGAAATTAAAAA GCGCATGGG-AGGTT TTTTTC ACCCTACACATGCGC TATGCTTCGTTATCT TERM 6741 4872313 - 4872355 + r 70 -2.9 -4.98531 | gap 3, overlap 4872312 4872311 GGTGATGTGCCACCT G-C-TCGTG-CCTGGAAGTG GGCCAA CACTTTCAGGTCACGGCGAC TTTTTAATTTCCACC TERM 6742 4872434 - 4872402 - R 86 -9.1 -4.30719 | opp_overlap 4872403 4872410, overlap 4872410 TTGTTTGAGAAGAAA TGCAAGAAGGGGTGC ACT GCACCCCTTTTTTCT TGCTTTCTTTTACTT TERM 6743 4872403 - 4872433 + r 100 -14.8 -3.82857 | opp_overlap 4872402 4872410, overlap 4872410 TGTTTGAGAAGAAAT GCAAGAAGGGGTGC ACT GCACCCCTTTTTTC TTGCTTTCTTTTACT TERM 6744 4872426 - 4872410 - R 100 -13.7 -3.81626 | opp_overlap 4872403 4872410, overlap 4872402 GAAGAAATGCAAGAA GGGGTGC ACT GCACCCC TTTTTTCTTGCTTTC TERM 6745 4872410 - 4872426 + r 100 -13.7 -5.59655 | opp_overlap 4872410 4872402, overlap 4872403 GAAGAAATGCAAGAA GGGGTGC ACT GCACCCC TTTTTTCTTGCTTTC Dhaf_4577 4873684 - 4872449 - | hypothetical protein TERM 6746 4873079 - 4873103 + g 71 -8.6 -3.65656 | GATATAGATGCTTTG GATTTCCGCA AACCC TGCGGCAATC TTCTCTATATCCTGC TERM 6747 4873463 - 4873479 + g 74 -10.9 -2.75963 | overlap 4873462 TTCTTGAATCATCCC CTGCAGA ACC TCTGCAG CTTTGGCATAGACCT TERM 6748 4873768 - 4873715 - R 80 -10.4 -3.40867 | gap 1, opp_overlap 4873711 4873715 4873743 4873747, overlap 4873711 4873755 TCATGGATGAATCAA GGGGACAGGTACCTTGATTCA-TTG GGGTG CAGGTGAATAATGGGACCTGTCCCC TTGATTCACTGCTAT TERM 6749 4873715 - 4873768 + r 100 -13.9 -3.38584 | opp_overlap 4873711 4873715 4873755, overlap 4873711 4873743 4873747 TCATGGATGAATCAA GGGGACAGGTACCTTGATTCATTGG GGTG CAGGTGAATAATGGGACCTGTCCCC TTGATTCACTGCTAT Dhaf_4578 4874943 - 4873780 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 6750 4873959 - 4873969 + g 71 -2.6 -4.99861 | TGAATTGGCCCAGCA TATT GGG AATA TTTTTATGATTGATG TERM 6751 4874664 - 4874678 + g 74 -6.4 -4.46514 | opp_overlap 4874664 GGGCGGCCATAATCA TGGTGG CGA TCACCA TTTCTTTCACTCCGT Dhaf_4579 4876150 - 4875062 - | phosphoserine aminotransferase TERM 6752 4876245 - 4876223 - R 100 -12.7 -4.71223 | opp_overlap 4876223, overlap 4876199 CCAGAATAGACAAAA CCCACCCCA GTCAT TGGGGCGGG TATTCCGCGGTGCCA TERM 6753 4876223 - 4876245 + r 79 -11.2 -3.03124 | opp_overlap 4876199 4876223 CCAGAATAGACAAAA CCCACCCCAG TCA TTGGGGCGGG TATTCCGCGGTGCCA TERM 6754 4876390 - 4876364 - R 100 -14.5 -5.28281 | opp_overlap 4876364 AGAAAATAAATAAAA CCTCTCATCCC AATCA GGGACGAGAGG TTATTCCCGCGTTGC TERM 6755 4876364 - 4876390 + r 100 -12.3 -3.63569 | opp_overlap 4876364 AGAAAATAAATAAAA CCTCTCATCCC AATCA GGGACGAGAGG TTATTCCCGCGTTGC Dhaf_4580 4877248 - 4876646 - | metal dependent phosphohydrolase Dhaf_4581 4878206 - 4877283 - | Homoserine O-succinyltransferase TERM 6756 4878298 - 4878280 - R 100 -11.8 -5.26247 | TTAAAATAAAGAAAA CCTCTTTC CAA GAAAGAGG GTATCGCTAAAAATT TERM 6757 4878602 - 4878646 + r 73 -7.2 -4.12554 | gap 2, opp_overlap 4878605, overlap 4878605 GTCTTTTTCATAACA G-AAGACGGCTCTC-CCCGGCT AAA AGCAGGATGAGAACCGTCTTAC TTCTTATTATCTTTA TERM 6758 4878605 - 4878642 + r 75 -9.1 -3.63862 | gap 1, opp_overlap 4878605, overlap 4878602 TTTTTCATAACAGAA GACGGCTCTC-CCCGGCT AAA AGCAGGATGAGAACCGTC TTACTTCTTATTATC TERM 6759 4878642 - 4878605 - R 100 -13.5 -3.7511 | gap 1, opp_overlap 4878605 4878602 TTTTTCATAACAGAA GACGGCTCTC-CCCGGCT AAA AGCAGGATGAGAACCGTC TTACTTCTTATTATC Dhaf_4582 4879585 - 4878692 - | extracellular solute-binding protein family 3 TERM 6760 4879167 - 4879184 + g 71 -4.2 -4.76087 | overlap 4879161 TTCATATAGGGGTTG GCAAAA TCCACT TTTTGC TTTCTTTCTTCTGTC Dhaf_4583 4880503 - 4879724 - | ABC transporter related TERM 6761 4879841 - 4879831 - G 71 -6.8 -4.30978 | CTGAATCCATGAAAA CGAC CCG GTCG GCGACGGCTTGGGCA TERM 6762 4879995 - 4879975 - G 73 -4.8 -4.7373 | gap 1 TCACCTCATCAAAAA GCATG-ATC TCCG GATTCATGC ATAAGGCTCTGACGA Dhaf_4584 4881191 - 4880514 - | polar amino acid ABC transporter, inner membrane subunit Dhaf_4585 4881837 - 4881172 - | polar amino acid ABC transporter, inner membrane subunit TERM 6763 4882063 - 4882016 - R 95 -7.7 -5.0916 | opp_overlap 4882016 TTGCCAAGAGAAAAA GGAACCGACAGCTTTTGAACC GGAATA GGTTCGCGAGGTGTCAGTTCC TTTTTCTTTTTTAGT TERM 6764 4882016 - 4882063 + r 100 -9.9 -5.77571 | opp_overlap 4882016 TTGCCAAGAGAAAAA GGAACCGACAGCTTTTGAACC GGAATA GGTTCGCGAGGTGTCAGTTCC TTTTTCTTTTTTAGT Dhaf_4586 4882878 - 4882126 - | exodeoxyribonuclease III Xth TERM 6765 4883017 - 4882984 - R 100 -13.3 -5.37345 | opp_overlap 4882987 4883006 4883012, overlap 4883012 4883013 TGCAACCATAAAAAA TCAAGCTTTCAGCTT CACA AGGCTGAAAGCCTGA TTCCAGGGTATTCAG Dhaf_4587 4884816 - 4883044 - | peptidase M24 Dhaf_4588 4885468 - 4884875 - | SirA family protein TERM 6766 4885256 - 4885285 + g 80 -6.4 -4.78107 | ACAGCCTTCTCCAGC GACAATGGTGAC TTCAAT GACGCCGTTGTC TTTTTCCTGATACTC TERM 6767 4885511 - 4885491 - R 70 -8.1 -3.64703 | opp_overlap 4885490 4885492, overlap 4885492 TCCTCCTTATCTAAA TCCGCAGGC TAA GCCGGCGGT GTTCTAATACTGTCA TERM 6768 4885492 - 4885510 + r 86 -11.6 -3.29987 | opp_overlap 4885491 4885492, overlap 4885490 CCTCCTTATCTAAAT CCGCAGGC TAA GCCGGCGG TGTTCTAATACTGTC TERM 6769 4885510 - 4885492 - R 81 -11.6 -2.78679 | opp_overlap 4885492 4885490, overlap 4885491 CCTCCTTATCTAAAT CCGCAGGC TAA GCCGGCGG TGTTCTAATACTGTC Dhaf_4589 4886669 - 4885647 - | selenide, water dikinase Dhaf_4590 4888677 - 4886944 - | putative sensor with HAMP domain TERM 6770 4888445 - 4888473 + g 90 -10.4 -4.45945 | TACCGATGCACTTGA GGGCTTTCTG CCAATAGAT CAGAAAGCCC TTTTAATTGATCAAT TERM 6771 4888598 - 4888581 - G 71 -4.8 -4.63218 | TGGTGCTGAAGAAAA GAGCCA GTCCCA TGGCCC CGACAATAAACAAGG Dhaf_4591 4889471 - 4888674 - | two component transcriptional regulator, AraC family Dhaf_4592 4890621 - 4889515 - | methionine-R-sulfoxide reductase Dhaf_4593 4891011 - 4890661 - | hypothetical protein TERM 6772 4891313 - 4891345 + r 100 -12.1 -5.28683 | opp_overlap 4891313 TCTGATACTAAAAAA TTAACAGCCGGTCCA TTA TGAACGGGCTGTTAA TTTTTTAGTATTCGT TERM 6773 4891345 - 4891313 - R 100 -14.3 -5.21709 | opp_overlap 4891313 TCTGATACTAAAAAA TTAACAGCCGGTCCA TTA TGAACGGGCTGTTAA TTTTTTAGTATTCGT Dhaf_4594 4892234 - 4891434 - | hypothetical protein Dhaf_4595 4893843 - 4892266 - | AMP-dependent synthetase and ligase Dhaf_4596 4895036 - 4893882 - | methyl-accepting chemotaxis sensory transducer Dhaf_4597 4896314 - 4895100 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 6774 4895377 - 4895359 - G 72 -10.2 -2.97245 | overlap 4895354 TGATTCATAAGCATA CTGCAGGG GAC CCCGGCAG ATCTCAGGATCTCTT TERM 6775 4895434 - 4895445 + g 72 -5.8 -4.39426 | CAAAAATCCTCAATG GCTG CCTC CAGC TTTTGTCCGCCTCTG Dhaf_4598 4897852 - 4896383 - | sodium/sulphate symporter TERM 6776 4896588 - 4896567 - G 71 -6.5 -4.18367 | gap 1 CAGGAGACACATAAA GCCACCGTGA GCA TCTCGG-GGC TGATGCCAACCACCG TERM 6777 4896836 - 4896824 - G 80 -4.7 -5.06414 | CGTCCCCAATAAAAA CAGGC TTT GCCAG GGAATCCCCTCACGA TERM 6778 4897317 - 4897328 + g 71 -4.4 -4.72272 | ACGATCATAAGTTTG GGAT AGTG ATCC TTTTTGGTAAAGCCA TERM 6779 4897579 - 4897568 - G 89 -3.6 -5.63012 | AAAAACAAATAAAAA GGCG TCCC CACC ATAACCCATTTGAAA TERM 6780 4897971 - 4898010 + r 100 -15.1 -3.62096 | opp_overlap 4897952 4897982, overlap 4898004 CACCTGGGCTAGCCG GACCGGCAATACCTGAT GCAAAA ACCAGGTATTGCCGGAC TTTAAACTGCTGAAC Dhaf_4599 4899514 - 4898051 - | sodium/sulphate symporter TERM 6781 4899616 - 4899670 + r 89 -11.5 -3.41084 | gap 1, overlap 4899614 4899617 4899619 GCACCACCTCCTTGG CCGCCCCTGTGTTTGCAGGCC-CC GGGCATTG GGTGGGCTGCAAACACAGAGGTGA TGTCTTTATCTGTAT TERM 6782 4899617 - 4899669 + r 100 -15 -2.63566 | gap 1, overlap 4899616 4899614 4899619 CACCACCTCCTTGGC CGCCCCTGTGTTTGCAGGCC-CC GGGCATTG GGTGGGCTGCAAACACAGAGGTG ATGTCTTTATCTGTA TERM 6783 4899619 - 4899667 + r 95 -14 -2.8459 | gap 1, overlap 4899617 4899616 4899614 CCACCTCCTTGGCCG CCCCTGTGTTTGCAGGCC-CC GGGCATTG GGTGGGCTGCAAACACAGAGG TGATGTCTTTATCTG Dhaf_4600 4900818 - 4899676 - | acyl-CoA dehydrogenase domain protein Dhaf_4601 4901604 - 4900834 - | Enoyl-CoA hydratase/isomerase Dhaf_4602 4903677 - 4901632 - | NADH:flavin oxidoreductase/NADH oxidase TERM 6784 4903301 - 4903326 + g 71 -9 -3.47955 | overlap 4903299 4903302 4903307 TTGAGGATCTGAATG TCGGAGGGAC CGAAAT GTCCTTCCGG TTCATTAGTGTTTCG Dhaf_4603 4904007 - 4903726 - | 4Fe-4S ferredoxin, iron-sulfur binding domain protein Dhaf_4604 4905302 - 4904004 - | Electron-transferring-flavoprotein dehydrogenase TERM 6785 4904642 - 4904631 - G 76 -7.2 -4.31397 | overlap 4904628 4904633 ATTGGTATAAAAGAA GCCG CCGC CGGC CACACCATGAGTGGC Dhaf_4605 4906272 - 4905325 - | Electron transfer flavoprotein alpha subunit Dhaf_4606 4907058 - 4906288 - | Electron transfer flavoprotein alpha/beta-subunit TERM 6786 4906831 - 4906842 + g 75 -5.8 -4.62772 | overlap 4906824 4906823 4906832 CTCTTCCGGTCCTCT GGAG AGGA CTCC TTTCTTTAGTTTGGA Dhaf_4607 4908300 - 4907080 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 6787 4907186 - 4907212 + g 75 -5.6 -4.81249 | overlap 4907186 4907189 ATGCCATACGTGGGA CCGCCCCGGAAG ATC CGGCCGGGGTTG TTTTTGAATTTAGGA TERM 6788 4907189 - 4907209 + g 81 -8.1 -4.50298 | overlap 4907186 4907186 CCATACGTGGGACCG CCCCGGAAG ATC CGGCCGGGG TTGTTTTTGAATTTA TERM 6789 4907951 - 4907991 + g 75 -6 -4.64766 | TGGGCAATGACCAGT TGGGGGTTGGCCTGCCAG AGCAC CTCGTCGGTAAGCCCCCA TTTTTCCCATGTACC TERM 6790 4908443 - 4908408 - R 100 -16.4 -5.80364 | opp_overlap 4908408 ATGCCAATAAAAAAA GGTACAAAAACCGGTT TTTC AAGCGGTTTTTGTACC TTTTTGTTCTTATTC TERM 6791 4908408 - 4908443 + r 100 -16.4 -5.3798 | opp_overlap 4908408 ATGCCAATAAAAAAA GGTACAAAAACCGGTT TTTC AAGCGGTTTTTGTACC TTTTTGTTCTTATTC Dhaf_4608 4910521 - 4908521 - | sigma54 specific transcriptional regulator, Fis family TERM 6792 4908761 - 4908748 - G 77 -6.7 -4.62302 | CAAGAGTTTGAAAAA TCTGC TTAG GCAGA ACATCCGGTGTGATG TERM 6793 4908957 - 4908980 + g 76 -7.4 -4.46112 | overlap 4908959 ATGGGGATATCCTCT TTTCTCTCCC GAAG GGGAGGGATA TTTATTTCAATCACA TERM 6794 4908959 - 4908978 + g 79 -10 -3.83744 | overlap 4908957 GGGGATATCCTCTTT TCTCTCCC GAAG GGGAGGGA TATTTATTTCAATCA TERM 6795 4910715 - 4910697 - R 100 -11 -5.09426 | CCTAAGGTTAAAAAA GAGCCGTC ATA AACGGCTC CAGGCGTAAACAATG Dhaf_4609 4911293 - 4910745 - | hypothetical protein TERM 6796 4911139 - 4911120 - G 79 -10.7 -3.54424 | TTTTAGCTCTGCAAA GTCCCCC ACATTA GGGGGAC ACATCCAGTTCTTTT TERM 6797 4911371 - 4911347 - R 80 -10 -3.70676 | opp_overlap 4911347, overlap 4911343 GATAGTGAAAAGCAA GCCCCCGAAG ACAAG CTTCGAAGGC TTTTATACTAAACTT TERM 6798 4911347 - 4911371 + r 73 -5.6 -4.47328 | opp_overlap 4911347 4911343 GATAGTGAAAAGCAA GCCCCCGAAG ACAAG CTTCGAAGGC TTTTATACTAAACTT Dhaf_4610 4912374 - 4911397 - | hypothetical protein Dhaf_4611 4913044 - 4912412 - | cobalamin B12-binding domain protein TERM 6799 4912624 - 4912634 + g 73 -5.4 -4.52589 | AGCAGGCTACGATCT TGAC ATT GTCA TTTTCTCTGACAGCA Dhaf_4612 4913891 - 4913091 - | dihydropteroate synthase DHPS TERM 6800 4914243 - 4914213 - R 100 -14.2 -5.14985 | opp_overlap 4914235 4914239 CCAAACATACAAAAA GCTCCATAAAAATC ATT GATTCTTACGGAGC CGCTCCTAAATTATT Dhaf_4613 4914422 - 4914249 - | hypothetical protein Dhaf_4614 4914999 - 4914610 - | Rhodanese domain protein Dhaf_4615 4916095 - 4915172 - | transcriptional regulator, LysR family TERM 6801 4915287 - 4915272 - G 74 -4 -4.9792 | TATGCCATATAAAAA TTGACG GGCG CATCAA AATCGCTGACTTTTA Dhaf_4616 4916775 - 4916350 - | UspA domain protein Dhaf_4617 4918084 - 4916816 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 6802 4918195 - 4918160 - R 76 -10.5 -2.95113 | gap 1, opp_overlap 4918162, overlap 4918159 4918162 4918186 GCCCAAAATGCAAAG GACCTCCTGC-TCAGG TCTAT CCAAAAGCAGGAGGTC TTGCCCGTCATAACC Dhaf_4618 4919135 - 4918203 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 6803 4918349 - 4918365 + g 73 -5.1 -4.58644 | opp_overlap 4918349 GAGGTTCATAGATCA GGGTTAA CTG TTTACCC TTTTCCTTGTTCGTT Dhaf_4619 4920410 - 4919160 - | Polysulphide reductase NrfD Dhaf_4620 4921220 - 4920444 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 6804 4920816 - 4920827 + g 88 -7.2 -5.17576 | CTGGCATTTCCTGAT GCCG GGAA CGGC TTTTTTCCATTCATA Dhaf_4621 4922816 - 4921233 - | hydrogenase, Fe-only TERM 6805 4923193 - 4923174 - R 100 -10.8 -5.79595 | opp_overlap 4923174 4923176 TTTTAAAATAAAAAA CATCCACT TGGC AGTGGATG TCGTTAGGGATTATT TERM 6806 4923174 - 4923193 + r 77 -10.8 -2.74286 | opp_overlap 4923174, overlap 4923176 TTTTAAAATAAAAAA CATCCACT TGGC AGTGGATG TCGTTAGGGATTATT Dhaf_4622 4924666 - 4923221 - | glutamyl-tRNA(Gln) amidotransferase, B subunit Dhaf_4623 4926158 - 4924683 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 6807 4925623 - 4925608 - G 75 -6 -4.60255 | overlap 4925609 ATAACTCCGCAAAAA GCCGCC GGCT GGCGGA TATCCCCTCCGGTGT TERM 6808 4925622 - 4925609 - G 73 -9.5 -3.3543 | overlap 4925608 TAACTCCGCAAAAAG CCGCC GGCT GGCGG ATATCCCCTCCGGTG TERM 6809 4925687 - 4925656 - G 75 -7.8 -4.15453 | GAACCCAGGGCAAAA GCCGCTTCCCCCGC AGCC ACGGCGGCAGCCGC TCCCCCGCCGGAACC Dhaf_4624 4926457 - 4926173 - | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 6810 4927295 - 4927307 + G 79 -10.5 -3.67597 | GGATGAGCGGGCCGT GGCCC AAT GGGCC TTCTTACATAAGGCC TERM 6811 4927347 - 4927364 + G 77 -6.9 -4.53705 | opp_overlap 4927345 TTAGGCTCAGACACC CCCATGG ATTC CCAGGGG TTTTATGTACCGGTT TERM 6812 4927585 - 4927555 - g 100 -5.4 -5.93252 | opp_overlap 4927565 CGGAAAAAGAAAAAA TGAGAAGCAACCTG CTG CGGGCTATTTCTCA CGACCTCCGCACCCC Dhaf_4625 4926729 - 4928246 + | histidine kinase Dhaf_4626 4928236 - 4928934 + | two component transcriptional regulator, winged helix family TERM 6813 4928965 - 4929017 + F 100 -16.8 -4.32579 | gap 1, opp_overlap 4928955 4928981 ATAACCCGCCTTGAA CGGCTGAAATCTATAATTATTCTTT GCTT AAAGAATAATTG-GGGTTTCAGCCG TTTCTTATGAGATCT Dhaf_4627 4929156 - 4930982 + | amino acid permease TERM 6814 4931107 - 4931068 - f 78 -9.6 -3.72576 | opp_overlap 4931068 4931074 4931079, overlap 4931069 4931076 TTCCTGGTGAGTAAA TGTTAATATAACATCGTT ATAT AACGATGTTATATTAATT CGACAAGGGAATTGG TERM 6815 4931106 - 4931069 - f 91 -13.1 -2.83403 | opp_overlap 4931068 4931074 4931079, overlap 4931068 4931076 TCCTGGTGAGTAAAT GTTAATATAACATCGTT ATAT AACGATGTTATATTAAT TCGACAAGGGAATTG TERM 6816 4931074 - 4931101 + F 100 -13 -3.33696 | opp_overlap 4931069 4931068 4931076, overlap 4931068 4931079 GTGAGTAAATGTTAA TATAACATCGTT ATAT AACGATGTTATA TTAATTCGACAAGGG TERM 6817 4931099 - 4931076 - f 79 -11.2 -3.13382 | opp_overlap 4931068 4931074 4931079, overlap 4931069 4931068 GAGTAAATGTTAATA TAACATCGTT ATAT AACGATGTTA TATTAATTCGACAAG TERM 6818 4931079 - 4931096 + F 75 -8.5 -3.76048 | opp_overlap 4931076 4931069 4931068, overlap 4931068 4931074 TAAATGTTAATATAA CATCGTT ATAT AACGATG TTATATTAATTCGAC TERM 6819 4931527 - 4931553 + G 71 -4.5 -4.50627 | gap 1, overlap 4931536 GTCCATCGTCTGGCT GA-AGTGGAGGT GGAG AGCTCCACTATC TTTCTTTCCTGCATG TERM 6820 4931620 - 4931642 + G 80 -2.6 -5.48303 | overlap 4931618 GATCTCAATCATATG CTGGCCAG CGCTTAT CTGACCGG TTTTTTTGAAGTTGT Dhaf_4628 4931134 - 4931754 + | transcriptional regulator, TetR family TERM 6821 4931793 - 4931808 + F 72 -7.6 -3.75153 | opp_overlap 4931793 ATTTTTTGCCTATAA GTTAGC AGGA GCTAAC TTTAACTTAAACAAG TERM 6822 4932046 - 4932069 + G 80 -8.8 -4.36914 | gap 1 TAATTGGTATTTAGG CTGGTGCGCCG TGG CGGC-CGCCGG TTTTCTGGGCAAGGC Dhaf_4629 4931855 - 4933597 + | ABC transporter related TERM 6823 4934178 - 4934153 - g 89 -6 -5.28176 | overlap 4934154 CTGATGCAGAAAAAA TCCCGGACCA TTTCCC CGGCCCGGGT AGCGGCCCAGTCTGC TERM 6824 4934177 - 4934154 - g 76 -9.5 -3.76182 | overlap 4934153 TGATGCAGAAAAAAT CCCGGACCA TTTCCC CGGCCCGGG TAGCGGCCCAGTCTG TERM 6825 4935277 - 4935323 + G 72 -10.7 -2.52896 | opp_overlap 4935266, overlap 4935274 TGAACAGCTTATGGC CGAGGGCGGGCTGTATGCCGA CTTTA TCGGCATGCGGGCCGCAGCCG TGGGTTGGAAGCTGG Dhaf_4630 4933610 - 4935376 + | ABC transporter related Dhaf_4631 4935799 - 4935383 - | protein of unknown function DUF336 Dhaf_4632 4937698 - 4935824 - | TRAP dicarboxylate transporter, DctM subunit TERM 6826 4937420 - 4937407 - G 71 -3.8 -4.72007 | CTTTACTAAAAGAAA CAGG TAAAAT CCTG GTAACGGCGTCCACA TERM 6827 4937760 - 4937800 + r 72 -9.2 -3.17194 | opp_overlap 4937787 ATTTGGAGATCATTT TGGAGGATTCCTTC ATTAATAAAGGTA GAAGGGATCCTCCA TTGAATTCAAGCCAT Dhaf_4633 4938889 - 4937825 - | TRAP dicarboxylate transporter, DctP subunit TERM 6828 4939143 - 4939093 - R 80 -11.3 -2.62184 | gap 2 GCTGGGGCGATATCA GCCTGTCAAGGGCAGGAACTTCATC CCG GCTAACGC-CCT-CCCTTGACAGGC ACCTTCAAATTAACA Dhaf_4634 4940928 - 4939183 - | sulfoacetaldehyde acetyltransferase TERM 6829 4940123 - 4940145 + g 80 -9 -4.27617 | overlap 4940124 AGAATAACATCTGCT TCGGCCAGGC TAT GCATGGCCGC TTTTGATCCCATGTA TERM 6830 4940124 - 4940144 + g 82 -12.5 -3.16088 | overlap 4940123 GAATAACATCTGCTT CGGCCAGGC TAT GCATGGCCG CTTTTGATCCCATGT TERM 6831 4941122 - 4941155 + r 82 -8.2 -4.24404 | opp_overlap 4941122 AAAGGTAGAAAAAAA GCTTAAACACCTTG CAAATA CAAGGGGTTCAAGC TTTTAGAGTTTAAAT TERM 6832 4941155 - 4941122 - R 100 -11.1 -5.68039 | opp_overlap 4941122 AAAGGTAGAAAAAAA GCTTAAACACCTTGC AAAT ACAAGGGGTTCAAGC TTTTAGAGTTTAAAT Dhaf_4635 4941975 - 4941223 - | transcriptional regulator, GntR family TERM 6833 4942256 - 4942313 + r 100 -15.2 -4.08546 | opp_overlap 4942262 4942263, overlap 4942263 CCAGCTGTATGCCGC T-CATAAGGGAGAGCCGCCGGATTACTT ATTA AAGTAA-CTGGCGGCTCTCCTTTGCGTA TTTCTGCTTCCTGCT TERM 6834 4942306 - 4942262 - R 100 -16.6 -3.29144 | gap 1, opp_overlap 4942256 4942263, overlap 4942263 GTATGCCGCTCATAA GGGAGAGCCGCCGGATTACTT ATTA AAGTAA-CTGGCGGCTCTCCT TTGCGTATTTCTGCT TERM 6835 4942305 - 4942263 - R 100 -20.1 -2.57344 | gap 1, opp_overlap 4942256 4942263, overlap 4942262 TATGCCGCTCATAAG GGAGAGCCGCCGGATTACTT ATTA AAGTAA-CTGGCGGCTCTCC TTTGCGTATTTCTGC TERM 6836 4942263 - 4942305 + r 100 -22.3 -3.83324 | gap 1, opp_overlap 4942263 4942262, overlap 4942256 TATGCCGCTCATAAG GGAGAGCCGCCGGATTACTT ATTA AAGTAA-CTGGCGGCTCTCC TTTGCGTATTTCTGC Dhaf_4636 4943433 - 4942363 - | methyl-accepting chemotaxis sensory transducer TERM 6837 4943781 - 4943801 + r 73 -8.3 -3.59262 | GGTCAGCATCCCCAT CCCCATG CCTACTT CATGGGG TTTAACGGTCTCCGG TERM 6838 4943885 - 4943870 - R 80 -10.4 -3.52204 | CTATGCCCAAAGCAA CTGCCC ATAA GGGCAG ACCAGGGAAATGAAG TERM 6839 4944177 - 4944125 - R 100 -12.2 -4.27686 | gap 2, opp_overlap 4944133 GAAAATTAGCTAAAA CCCAAATCCCG--GCAAGCAGCCAAA GGC TCCGGCTGCCTGCCTCTGAATTTGGG CGCCGGTTCTTTGCT TERM 6840 4944985 - 4944951 - R 100 -14.4 -3.85698 | opp_overlap 4944954 4944958, overlap 4944954 4944958 TTCTTGCCGGATAAA TAATAAACCCACCGGC AAA ACCGGAGGGTCTATTA TGCAAATAAAGTTTA TERM 6841 4944954 - 4944982 + r 71 -8.8 -3.31263 | opp_overlap 4944951 4944954 4944958, overlap 4944958 TTGCCGGATAAATAA TAAACCCACCGG CAAAA CCGGAGGGTCTA TTATGCAAATAAAGT TERM 6842 4944982 - 4944954 - R 100 -11.7 -4.06419 | opp_overlap 4944954 4944958, overlap 4944951 4944958 TTGCCGGATAAATAA TAAACCCACCGGC AAA ACCGGAGGGTCTA TTATGCAAATAAAGT TERM 6843 4944958 - 4944978 + r 72 -9.6 -3.17622 | opp_overlap 4944954 4944951 4944958, overlap 4944954 CGGATAAATAATAAA CCCACCGG CAAAA CCGGAGGG TCTATTATGCAAATA TERM 6844 4944978 - 4944958 - R 100 -10.3 -4.63048 | opp_overlap 4944958 4944954, overlap 4944954 4944951 CGGATAAATAATAAA CCCACCGGC AAA ACCGGAGGG TCTATTATGCAAATA Dhaf_4638 4946364 - 4945009 - | major facilitator superfamily MFS_1 TERM 6845 4946738 - 4946762 + r 71 -8.5 -3.50832 | opp_overlap 4946738, overlap 4946736 ACTGCATAACAACAA TACCCCCAAGC TCA GCTCGGAGGTA TCTTTAGGTTTAGCC TERM 6846 4946762 - 4946738 - R 100 -12.9 -4.03219 | opp_overlap 4946738 4946736 ACTGCATAACAACAA TACCCCCAAGC TCA GCTCGGAGGTA TCTTTAGGTTTAGCC Dhaf_4639 4948508 - 4946784 - | putative sigma54 specific transcriptional regulator TERM 6847 4947179 - 4947203 + g 74 -10.8 -2.82516 | gap 1, opp_overlap 4947156 4947178, overlap 4947170 CGATGGGGATCACAT CCTCC-TTGCG CTGG CGCAAAGGAGG TATGGTCATGGGAAC TERM 6848 4947330 - 4947346 + g 73 -3.5 -4.91852 | overlap 4947331 TTTTATCGTTTTTTT CCCGCCG ACC CGGAGGA TTTCTTTTTCCTGAA TERM 6849 4947521 - 4947507 - G 74 -2.8 -5.08824 | CTCGTAGCCAAAAAA CTCC GATTCCA GGAG GTTGGCCGGTATGGC TERM 6850 4947593 - 4947558 - G 77 -8.2 -4.1822 | opp_overlap 4947541 GTTTATCTTAATAAA CGGTTTCTCAGAGCGA TGAC TCGCCCTGTGAATCAG CTGGGCAATCAGTTC TERM 6851 4947670 - 4947681 + g 79 -2.2 -5.50499 | gap 1, opp_overlap 4947670 CGGGCTACATGATAA GC-GG TAT CCAGC TTTTTTTGCATATCA TERM 6852 4947952 - 4947962 + g 74 -6.8 -4.31293 | GTTCTGAAAACCATT TCGG TAA CCGA TTTATTCATATATCC TERM 6853 4948292 - 4948303 + g 70 -2.2 -4.93696 | gap 1 TCTTTTGATTATTTT C-GGC TTT GCCTG TTTTTAATATTTCCA Dhaf_4640 4948923 - 4949729 + | dihydropteroate synthase DHPS Dhaf_4641 4949763 - 4950404 + | cobalamin B12-binding domain protein Dhaf_4642 4950437 - 4951585 + | Uroporphyrinogen-III decarboxylase-like protein Dhaf_4643 4952747 - 4951716 - | TRAP dicarboxylate transporter, DctP subunit TERM 6854 4952637 - 4952648 + g 77 -3 -5.252 | GTGAGAGAATTTGAT GATA ATTT TATC TTTTTTGTCCACCTG TERM 6855 4952894 - 4952877 - R 84 -2.7 -5.71638 | GAAGAATTAAAAAAA TTGCACC CTAA AGTACAA TTCGATATTTGTTGA Dhaf_4644 4953579 - 4952884 - | response regulator receiver and unknown domain protein TERM 6856 4953464 - 4953503 + g 75 -5.1 -4.71426 | gap 1, opp_overlap 4953490 ATTTCGATGGCTTTT TTGCCGG-TTCTGGCTTT ACCGC AAATCCGGAATCCGCCAA TTTTCTTAATAAACC Dhaf_4645 4955214 - 4953625 - | signal transduction histidine kinase regulating citrate/malate metabolism TERM 6857 4954656 - 4954645 - G 73 -3.6 -4.86731 | overlap 4954646 4954648 4954649 GCTGGCTAAATAAAA GGAC CCCA GCCC TCCCAGGGCTAAGCC Dhaf_4647 4956379 - 4955840 - | methylated-DNA/protein-cysteine methyltransferase TERM 6858 4956767 - 4956782 + G 80 -7.5 -4.59944 | overlap 4956772 GTTTCCTCGAGGTGC CCCGG GAAGCG CCGGG TTTCTTTATCATGCT TERM 6859 4957241 - 4957267 + G 74 -4.2 -4.89393 | overlap 4957242 TCTATTATGTCCTGG CCGGTGTCAGCG GAG CGCGGGCACAGA TTTTTCTGACGTTTG Dhaf_4648 4956607 - 4957797 + | hypothetical protein TERM 6860 4957832 - 4957866 + F 100 -12.3 -4.92757 | gap 1, opp_overlap 4957832 GCAGATAAGTAATAA GCCTTGAGTTACG-TC AGAC GATCGTATCTCAAGGC TTTTATTATTCATCA TERM 6861 4957866 - 4957832 - f 100 -12.3 -3.88097 | gap 1, opp_overlap 4957832 GCAGATAAGTAATAA GCCTTGAGTTACG-TC AGAC GATCGTATCTCAAGGC TTTTATTATTCATCA TERM 6862 4958319 - 4958307 - f 70 -3.5 -4.90778 | GCTATTCAAATAAAA TAATA AGA TATTA TAGGGAGGAATTCGT TERM 6863 4959697 - 4959675 - g 77 -4.3 -5.0095 | gap 1, opp_overlap 4959681 AAAAATAGAAGAAAA CAACAAGTAT TCGA ATACT-GTTG GTCAATCGATACTTC Dhaf_4649 4958335 - 4960296 + | methyl-accepting chemotaxis sensory transducer TERM 6864 4960378 - 4960343 - f 84 -5.5 -5.29445 | gap 1, opp_overlap 4960344, overlap 4960344 GCCTAATAATAAAAA GGCCTTGAG-CGCATA GAATT TATGTGCCTCAAGGCT TTGGTTCTTATTATG TERM 6865 4960377 - 4960344 - f 78 -9 -3.76582 | gap 1, opp_overlap 4960344, overlap 4960343 CCTAATAATAAAAAG GCCTTGAG-CGCATA GAATT TATGTGCCTCAAGGC TTTGGTTCTTATTAT TERM 6866 4960344 - 4960377 + F 100 -11.9 -4.15849 | gap 1, opp_overlap 4960344 4960343 CCTAATAATAAAAAG GCCTTGAG-CGCATAG AAT TTATGTGCCTCAAGGC TTTGGTTCTTATTAT TERM 6867 4960798 - 4960749 - f 71 -10.1 -2.61429 | opp_overlap 4960752, overlap 4960765 TAAAAGCGTTAGAAC CGGCCTGCATTTTAAACCCCTCG AATT CGACGGGTTTAAAATCCAAGTTG TTCCCTAAGTCCAAG TERM 6868 4960752 - 4960795 + F 100 -12.6 -3.68569 | opp_overlap 4960749 4960765 AAGCGTTAGAACCGG CCTGCATTTTAAACCCCTCG AATT CGACGGGTTTAAAATCCAAG TTGTTCCCTAAGTCC Dhaf_4652 4961253 - 4961357 + | hypothetical protein TERM 6869 4961409 - 4961383 - T 71 -3 -5.0065 | gap 1 TACTTAGAAATAAAA GGCAC-CAGAA TTTTGT CCCTGTGTGCC CCTTGCTTTCGTTAA TERM 6870 4961573 - 4961534 - T 88 -10.1 -4.21827 | opp_overlap 4961539 4961541 4961562, overlap 4961541 TCAAATACCCCAAAA TAACTAATGCCATGCGG GTTTGA CCGCATGGCATCTTTTA TTACCTAAGATTTTG TERM 6871 4961539 - 4961568 + T 100 -12.2 -4.67982 | opp_overlap 4961534 4961541, overlap 4961541 4961562 TACCCCAAAATAACT AATGCCATGCGG GTTTGA CCGCATGGCATC TTTTATTACCTAAGA TERM 6872 4961566 - 4961541 - T 100 -14.8 -3.68798 | opp_overlap 4961539 4961541 4961562, overlap 4961534 CCCCAAAATAACTAA TGCCATGCGG GTTTGA CCGCATGGCA TCTTTTATTACCTAA TERM 6873 4961541 - 4961566 + T 100 -14.8 -3.95554 | opp_overlap 4961541 4961534, overlap 4961539 4961562 CCCCAAAATAACTAA TGCCATGCGG GTTTGA CCGCATGGCA TCTTTTATTACCTAA TERM 6874 4961562 - 4961612 + T 76 -10.1 -3.37796 | gap 1, opp_overlap 4961541 4961534 4961608, overlap 4961541 4961539 4961608 GCGGGTTTGACCGCA TGGCATCTTTTATTACCTAAGATT TTGA GAAGTTAGGTAAT-AAAGATGCCA TTATGAGTAATGAGC TERM 6875 4961652 - 4961683 + T 70 -3.6 -4.90296 | opp_overlap 4961651 AACTTAATTGAAACT GCGGGAATTTCTTT TAAC GAAGATACCCCCGC TTTTTATGCCCTTTT Dhaf_4653 4962418 - 4961780 - | hypothetical protein Dhaf_4654 4963544 - 4962537 - | Domain of unknown function DUF1814 TERM 6876 4963445 - 4963404 - G 78 -12.4 -2.5194 | opp_overlap 4963396, overlap 4963403 GAAGTAGGCAGGAAG CGCACCCTGCTTTTGTGA TAATTC CCATAAAAGCAGGGTGAG GTAATAATCCTTTTC Dhaf_4655 4964193 - 4963525 - | hypothetical protein TERM 6877 4963986 - 4963998 + g 71 -4.8 -4.58283 | AGGTTTGCTTCACAT GGCA GTAGA TGCC TTTTTGCAGCCGTTC TERM 6878 4964304 - 4964333 + r 100 -16.6 -4.7497 | opp_overlap 4964301 4964300 4964311 TGCCCTCAAAAGTCT GATACCATGCGG ATTTGC CCGCATGGTATC TTTTTACTGCCTAAA Dhaf_4656 4965502 - 4964429 - | pentapeptide repeat protein Dhaf_4657 4967322 - 4966078 - | transposase IS4 family protein TERM 6879 4967951 - 4968002 + r 100 -26.3 -4.38712 | opp_overlap 4967951 TATTGAATTTTATAA TGAGCGTTCATAGGCATTGGG CTATAGAACA CCCAATGCCTATGAACGCTCA TTTTATGACAATCAG TERM 6880 4968002 - 4967951 - R 100 -27.8 -3.36968 | gap 1, opp_overlap 4967951 TATTGAATTTTATAA TGAGCGTTCATAGGCATTGGGCTAT AGA ACA-CCCAATGCCTATGAACGCTCA TTTTATGACAATCAG Dhaf_4658 4969255 - 4968302 - | Abi family protein Dhaf_4659 4970211 - 4969825 - | hypothetical protein Dhaf_4660 4970759 - 4970292 - | Domain of unknown function DUF1863 TERM 6881 4970545 - 4970562 + g 71 -6.3 -4.24963 | opp_overlap 4970539 ATTTCAAAAGGAACC CACCAAG AGTA TTTGGTG TTTTCCGTCATTATC TERM 6882 4971125 - 4971154 + r 73 -2.9 -5.22137 | gap 1, overlap 4971128 4971129 GTTACCTGGATTGTT CACTTCTGTGGTGA CGC TAACCACAG-ACTG TTTTCTTTTATGGTT TERM 6883 4971129 - 4971151 + r 72 -9.2 -3.11164 | overlap 4971128 4971125 CCTGGATTGTTCACT TCTGTGGTGA CGC TAACCACAGA CTGTTTTCTTTTATG Dhaf_4661 4972468 - 4971185 - | transposase IS116/IS110/IS902 family protein TERM 6884 4971484 - 4971505 + g 100 -10.1 -4.83759 | TACCTGAGCTACTCT CTCGCAAGG CCAA CCCTGCGAG TTTTTGGATTTGCTT TERM 6885 4971580 - 4971564 - G 73 -5.1 -4.61199 | opp_overlap 4971577 ACTTCAGAGAGAAAA CCTGCCA CGG TGACAAG GCCTACACCCTTGAT Dhaf_4662 4973551 - 4972583 - | peptidase C14 caspase catalytic subunit p20 TERM 6886 4973821 - 4973811 - H 89 -6.8 -5.32944 | TTGACAACTAAAAAA GGAG TAC CTCC CCAACATCTCGAAAT TERM 6887 4973869 - 4973858 - H 73 -5.8 -4.45168 | CGTCCAAAACACAAA CACC GAGA GGTG GGAAAGGAGTACTCC TERM 6888 4973916 - 4973930 + G 71 -7.2 -4.12198 | overlap 4973919 GCCAAGAACGTCTAT TTTCCT TGG AGGAAA TTTTAGAAACTTCTC Dhaf_4663 4973888 - 4975246 + | transposase IS1182 family protein TERM 6889 4975269 - 4975259 - T 86 -6.8 -5.0133 | opp_overlap 4975259 TAGTTTTTTAAAAAA CGGA AAT TCCG AAATTCTGTTAGTCT Dhaf_4664 4976735 - 4975545 - | transposase IS4 family protein TERM 6890 4976386 - 4976400 + g 71 -8.6 -3.61715 | GGACGTTGTGCCTGT GACGAA GGT TTCGTC TTATTGCAAACAGTA TERM 6891 4976923 - 4976912 - R 71 -4.4 -4.75776 | AACTCAACTCAAAAA CCTT CTCC AAGG CCAACACCACCTACG Dhaf_4665 4977707 - 4977006 - | hypothetical protein TERM 6892 4977347 - 4977361 + g 80 -6.4 -4.67755 | TATGCTTAGTTTCTT GAGGCA AAT TGCTTC TTTTTCGGTAAATGT TERM 6893 4977830 - 4977800 - R 93 -12.5 -2.90283 | opp_overlap 4977801, overlap 4977797 TACCCAAATCAAGGA TGCCCTCCCCCGC ACCAA GCGAGAGAGGGCT TTGCTATGTCTATAA TERM 6894 4977801 - 4977829 + r 100 -11.6 -3.92267 | opp_overlap 4977800 4977797 ACCCAAATCAAGGAT GCCCTCCCCCGC ACCAA GCGAGAGAGGGC TTTGCTATGTCTATA Dhaf_4666 4979529 - 4978306 - | diguanylate cyclase TERM 6895 4979702 - 4979673 - R 84 -3.6 -5.56112 | gap 1 ATAAAAAGCAAAAAA TGCCACATC-ACC TATCT GGTTGAAATGGCA TTTTTTGTAGACTTA Dhaf_4667 4980090 - 4979749 - | protein O-D-mannosyltransferase Dhaf_4668 4980456 - 4981808 + | hypothetical protein Dhaf_4669 4981896 - 4982261 + | hypothetical protein Dhaf_4670 4982451 - 4982224 - | hypothetical protein TERM 6896 4982317 - 4982354 + g 100 -17.1 -4.86001 | TGCCATCTTCGCCAA GGCCCAAGGGCTTTC TCTCAATT GACAGCCCTTGGGCC TTTTTATGACCTGAT TERM 6897 4982384 - 4982418 + g 100 -13 -5.626 | opp_overlap 4982382 4982381, overlap 4982386 TATCTGACATAATGT CCGGCCAATTTGTC TGATTGT GACAAATTGGCCTG TTTTTTTATGGCCTC TERM 6898 4982386 - 4982416 + g 100 -14.2 -4.45201 | opp_overlap 4982382 4982381, overlap 4982384 TCTGACATAATGTCC GGCCAATTTGTC TGATTGT GACAAATTGGCC TGTTTTTTTATGGCC TERM 6899 4982694 - 4982671 - g 100 -3.8 -5.95539 | GTTGAAACAAAAAAA CCAACCTC TCCTTCCG GCGGTTGG TCCGATCTTTGGAAA Dhaf_4671 4982647 - 4983996 + | hypothetical protein TERM 6900 4984035 - 4984055 + F 100 -9 -4.91109 | opp_overlap 4984035 GTCCATCCGGAAAAA GCCTTCCA CAACC TGGAGGGC TTTTTCTAATGAAGG TERM 6901 4984055 - 4984035 - f 79 -6.8 -4.59773 | opp_overlap 4984035 GTCCATCCGGAAAAA GCCTTCCA CAACC TGGAGGGC TTTTTCTAATGAAGG Dhaf_4672 4984064 - 4984159 + | hypothetical protein TERM 6902 4985507 - 4985519 + G 73 -4.8 -4.82901 | TTCCTGGAAAATGGC CGGA CTATC TCCG TTTTTCTCCAGGGGG TERM 6903 4985793 - 4985776 - g 71 -10.5 -2.83396 | overlap 4985773 TTTAAATGAAGAGGA GCCCGGC CCCA GCCAGGC AGAGCTTAAGACGGG TERM 6904 4986208 - 4986225 + G 71 -8.3 -3.74345 | opp_overlap 4986207 4986206 TTTCACTACCAAATC CCCGGGC CAGG GCACGGG TTTAGGTCTATACGT Dhaf_4673 4984217 - 4986358 + | PAS/PAC sensor signal transduction histidine kinase Dhaf_4674 4986355 - 4987746 + | two component, sigma54 specific, transcriptional regulator, Fis family TERM 6905 4987794 - 4987832 + F 100 -19.2 -5.29385 | opp_overlap 4987794 4987799 4987801 4987817 4987819 TTGTTCTTGACGAGA TGACACAGGTGTCATA CACTTAA TATGACACCTGTGTCA TTTTTTCATTAAGTT TERM 6906 4987832 - 4987794 - f 100 -19.9 -2.78384 | opp_overlap 4987794, overlap 4987799 4987801 4987817 4987819 TTGTTCTTGACGAGA TGACACAGGTGTCATAC ACTTA ATATGACACCTGTGTCA TTTTTTCATTAAGTT TERM 6907 4987827 - 4987799 - f 89 -12.6 -2.87468 | opp_overlap 4987794, overlap 4987794 4987801 4987817 4987819 CTTGACGAGATGACA CAGGTGTCATAC ACTTA ATATGACACCTG TGTCATTTTTTCATT TERM 6908 4987825 - 4987801 - f 71 -9.4 -2.98719 | opp_overlap 4987794, overlap 4987799 4987794 4987817 4987819 TGACGAGATGACACA GGTGTCATAC ACTTA ATATGACACC TGTGTCATTTTTTCA TERM 6909 4988024 - 4988012 - g 71 -10.5 -2.81316 | opp_overlap 4988015, overlap 4988011 GCATCATTGAACAAG CGGGG ATC CCCCG GGGAAGCTTCTATCA Dhaf_4675 4987888 - 4988541 + | transcriptional regulator, TetR family Dhaf_4676 4988538 - 4989242 + | Sigma 54 interacting domain protein TERM 6910 4989464 - 4989454 - g 77 -6.8 -4.63184 | AAGTCAGGTGAAAAA GCTG GCT CAGC TGGAGGGGCTGGCTG TERM 6911 4990219 - 4990245 + G 73 -7.2 -4.27316 | overlap 4990223 GATGGGAGGATTGTT GGGAGGGCTGTC CGG GATTGCCCTTTC TTTTCCCTTAACGGC TERM 6912 4990223 - 4990241 + G 80 -6.6 -4.72188 | overlap 4990219 GGAGGATTGTTGGGA GGGCTGTC CGG GATTGCCC TTTCTTTTCCCTTAA TERM 6913 4991246 - 4991260 + G 90 -12.8 -3.65754 | overlap 4991257 TTTCTGGCCATCCTG GCCGGC ATT GCCGGC TTTGCCCTGATTTAT TERM 6914 4991410 - 4991420 + G 83 -8.2 -4.48902 | overlap 4991399 CCTCGGCGTTCTCCT GGGG ATC CCCC TTTCTTTCGCTCTCT Dhaf_4677 4989236 - 4991614 + | protein of unknown function DUF214 Dhaf_4678 4991669 - 4992997 + | efflux transporter, RND family, MFP subunit TERM 6915 4993013 - 4993032 + T 77 -10.7 -2.87132 | AATAGGTTTCCTTCA GCGGGAG ATTGGG CTCCCGC TATCTAACCCCAAAA TERM 6916 4993097 - 4993129 + T 91 -8.5 -4.66537 | overlap 4993091 4993098 AGTCTATACGCCTTG CGAGGGCTTCTAC ACAAAAA GTAGAAGCTCTCA TTTCTTTGATTTATT TERM 6917 4993098 - 4993128 + T 89 -12 -3.37482 | overlap 4993091 4993097 GTCTATACGCCTTGC GAGGGCTTCTAC ACAAAAA GTAGAAGCTCTC ATTTCTTTGATTTAT Dhaf_4679 4993818 - 4993252 - | hypothetical protein TERM 6918 4993597 - 4993563 - G 79 -9.5 -3.83568 | opp_overlap 4993563, overlap 4993569 CGACATCCATAATAA TGAAAAGGGAAAAAT TTAAT AATTTCCCCTTTTCA TAGTTCACATCAGTA Dhaf_4680 4995191 - 4993815 - | hypothetical protein Dhaf_4681 4996827 - 4995343 - | glycerol kinase TERM 6919 4997030 - 4997074 + r 80 -5 -5.24551 | gap 1, opp_overlap 4997040, overlap 4997034 TTACTTGCGTACATA CGGCGAGATAGGCACCATCCC TTGC GGGATAACGCCTATCTC-TTG TTTTTATTCATTTCC TERM 6920 4997034 - 4997071 + r 100 -11.3 -4.67357 | opp_overlap 4997040, overlap 4997030 TTGCGTACATACGGC GAGATAGGCACCATCCC TTGC GGGATAACGCCTATCTC TTGTTTTTATTCATT TERM 6921 4997065 - 4997040 - R 72 -9.7 -2.8937 | opp_overlap 4997034 4997030 ACATACGGCGAGATA GGCACCATCCC TTGC GGGATAACGCC TATCTCTTGTTTTTA Dhaf_4682 4998653 - 4997082 - | hypothetical protein Dhaf_4683 4998958 - 4999332 + | Cupin 2 conserved barrel domain protein TERM 6922 4999382 - 4999367 - T 100 -10.4 -5.24799 | opp_overlap 4999361 GTACAAACAGAAAAA GGAGGC ATTT GCCTCC TTAAACTTCATTTTG TERM 6923 4999397 - 4999407 + T 75 -2.4 -5.30616 | CTTAAACTTCATTTT GCTC TAT GCGC TTTTTCTTTGGATGC Dhaf_4684 4999993 - 4999400 - | hypothetical protein TERM 6924 4999673 - 4999688 + g 77 -2.6 -5.29445 | gap 1, overlap 4999676 CAAATCAGCATACCC CTGTCCT TTA AGGA-AG TTTTTATTCTTCCAG TERM 6925 4999760 - 4999747 - G 71 -3.1 -4.84311 | CCCGATAGAATAAAA CAATC ACCC GATCG TCTTTGCGCCTTAGC Dhaf_4685 5000492 - 5000028 - | hypothetical protein TERM 6926 5000513 - 5000474 - G 85 -13.7 -2.87564 | opp_overlap 5000468 5000480, overlap 5000480 TTATTTCCGGAGATA GGAAAAGGGACCCCTTC ATTTTG GAAAGGATCCCTTGTCC AGCCACTTTTTAGCG TERM 6927 5000507 - 5000480 - G 85 -9.9 -4.39166 | opp_overlap 5000480 5000468, overlap 5000474 CCGGAGATAGGAAAA GGGACCCCTTC ATTTTG GAAAGGATCCC TTGTCCAGCCACTTT Dhaf_4686 5000892 - 5000599 - | methylated-DNA/protein-cysteine methyltransferase TERM 6928 5000986 - 5000959 - R 82 -7.7 -4.4768 | opp_overlap 5000955 5000959, overlap 5000955 GATTAAGACAAGAAA GGGAGCCCTTC ATTTTG GAAAGGATCCC TTCACTTCATTTCTT Dhaf_4687 5001823 - 5001131 - | two component transcriptional regulator, winged helix family TERM 6929 5001245 - 5001235 - G 77 -4.6 -4.96848 | TCTTGCAGATAAAAA CGGC GAT ACCG GTCAGCTCCCCCACA TERM 6930 5001988 - 5002009 + r 85 -9.5 -4.21908 | opp_overlap 5001988 CTCTGATTCTAAAAA GGAGTATCT TGGC GGATACTCC TTTTGGGTGCTCATC TERM 6931 5002009 - 5001988 - R 100 -8.8 -4.62069 | opp_overlap 5001988 CTCTGATTCTAAAAA GGAGTATC TTGGCG GATACTCC TTTTGGGTGCTCATC Dhaf_4688 5002871 - 5002044 - | anaerobic dimethyl sulfoxide reductase subunit C TERM 6932 5002423 - 5002409 - G 71 -4.2 -4.81852 | overlap 5002410 TGAGAACGAAGAAAA GCATGG CTC CCATGG ATAGTGCCGCTGCAT Dhaf_4689 5003453 - 5002875 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_4690 5006064 - 5003473 - | molybdopterin oxidoreductase TERM 6933 5004804 - 5004794 - G 71 -8.2 -3.72576 | CCTGCTTTTACCAAA GCGG GAC CCGC ATTCACCTGCTCTTT TERM 6934 5006266 - 5006315 + r 89 -12.3 -2.83403 | gap 1, opp_overlap 5006278, overlap 5006270 5006273 5006278 TAAATGATTATAACG CAGACAGGAAAAGGGACCCCTTCC TTT GGAAAGGATCCC-TTTGCTGTTTG ATTTCCTCACAGAGA TERM 6935 5006270 - 5006311 + r 85 -9.5 -4.10552 | gap 1, opp_overlap 5006278, overlap 5006266 5006273 5006278 TGATTATAACGCAGA CAGGAAAAGGGACCCCTTCC TTT GGAAAGGATCCC-TTTGCTG TTTGATTTCCTCACA TERM 6936 5006273 - 5006309 + r 100 -12.3 -3.64541 | opp_overlap 5006278, overlap 5006270 5006266 5006278 TTATAACGCAGACAG GAAAAGGGACCCCTTCC TTT GGAAAGGATCCCTTTGC TGTTTGATTTCCTCA TERM 6937 5006278 - 5006304 + r 90 -10.8 -4.05229 | opp_overlap 5006278, overlap 5006273 5006270 5006266 ACGCAGACAGGAAAA GGGACCCCTTCC TTT GGAAAGGATCCC TTTGCTGTTTGATTT TERM 6938 5006304 - 5006278 - R 100 -15.2 -4.39568 | opp_overlap 5006278 5006273 5006270 5006266 ACGCAGACAGGAAAA GGGACCCCTTCC TTT GGAAAGGATCCC TTTGCTGTTTGATTT Dhaf_4691 5007028 - 5006342 - | cytoplasmic chaperone TorD family protein TERM 6939 5007480 - 5007492 + r 86 -10.5 -3.78775 | TCTTTCTCTGCCTCA CCGGC TCC GCCGG TTTGATGCTCCCGCC Dhaf_4693 5009599 - 5007914 - | histidine kinase TERM 6940 5009289 - 5009307 + g 79 -2.4 -5.41143 | overlap 5009291 5009293 GGATTAAAATTCGTA TAGCGTAT AGT ATACCCTG TTTTTTTACCAAATA TERM 6941 5009650 - 5009686 + r 100 -13.3 -3.22756 | gap 1, opp_overlap 5009658, overlap 5009658 TTATAGCAGTTTATT GCCAAAAAGGAGTATC TCTTCC GATACTCC-TTTTGGC TCTTACTCATTGTTC TERM 6942 5009679 - 5009658 - R 100 -8.8 -4.59773 | opp_overlap 5009658 5009650 GTTTATTGCCAAAAA GGAGTATC TCTTCC GATACTCC TTTTGGCTCTTACTC TERM 6943 5009658 - 5009679 + r 86 -8.8 -4.29325 | opp_overlap 5009658, overlap 5009650 GTTTATTGCCAAAAA GGAGTATC TCTTCC GATACTCC TTTTGGCTCTTACTC Dhaf_4694 5010552 - 5009719 - | anaerobic dimethyl sulfoxide reductase subunit C TERM 6944 5010424 - 5010439 + g 80 -6.8 -4.66163 | GATCCCCAGGCCTGT CGCTGT GATC ACGGCG TTTTTGAATACCCCT Dhaf_4695 5011134 - 5010556 - | dimethylsulfoxide reductase, chain B Dhaf_4696 5013691 - 5011148 - | Trimethylamine-N-oxide reductase (cytochrome c) TERM 6945 5012425 - 5012415 - G 73 -8.2 -3.90112 | opp_overlap 5012414 CCTGCTTTAACCAAA GCCG GTC CGGC GTTGGTGGCCGAATT TERM 6946 5013863 - 5013815 - R 100 -10.4 -4.63218 | gap 1, opp_overlap 5013815 5013816, overlap 5013818 TTTTCGTTAATAAAA TAAGCCTGCCCCCCAACGTTTAT ACCT ATAAACGTCGGCGG-CAGGCCCC TTTGGCACTTATTGC TERM 6947 5013860 - 5013818 - R 100 -16.5 -4.43307 | gap 1, opp_overlap 5013816 5013815, overlap 5013815 TCGTTAATAAAATAA GCCTGCCCCCCAACGTTTAT ACCT ATAAACGTCGGCGG-CAGGC CCCTTTGGCACTTAT Dhaf_4697 5014734 - 5013901 - | anaerobic dimethyl sulfoxide reductase subunit C TERM 6948 5014606 - 5014621 + g 73 -5.4 -4.56775 | opp_overlap 5014619, overlap 5014607 GATCCCCAGGCCTGT TGCTGT GACC ACAGCG TTTTTAAACACCCCT Dhaf_4698 5015316 - 5014738 - | dimethylsulfoxide reductase, chain B Dhaf_4699 5017939 - 5015330 - | molybdopterin oxidoreductase TERM 6949 5016666 - 5016688 + g 79 -11.3 -3.55203 | gap 1, overlap 5016687 5016687 AAGGGGTTGACCACC GGCGGGAGGC CTCT GCCTCC-GCC TTTGACAAGGGTTTT TERM 6950 5017673 - 5017689 + g 80 -2.9 -5.36441 | overlap 5017674 ATAATCAGGCGAGTC GGGATGG GTA TCATCCG TTTTTTGTCTGAGGA TERM 6951 5018238 - 5018208 - R 89 -10.5 -3.97834 | opp_overlap 5018208 TAAGCTTATGAGAAA CCCCAGCAGTA GAAAAGTAA TACCGCTGGGG TTGTCGCATACACGG TERM 6952 5018323 - 5018301 - R 71 -4.8 -4.70583 | overlap 5018302 5018319 TTGAGCAACACAAAA GCAGATGCCC GAA AAGCATCTGT AAAAGCCCTTTCACA TERM 6953 5018322 - 5018302 - R 71 -8.3 -3.41627 | overlap 5018301 5018319 TGAGCAACACAAAAG CAGATGCCC GAA AAGCATCTG TAAAAGCCCTTTCAC Dhaf_4700 5019496 - 5018351 - | transposase IS4 family protein TERM 6954 5019679 - 5019661 - R 75 -7.4 -4.2828 | GCTTAGGGATGAAAA CGGGGTTT CTT AAATCCCG TGGCTGACGCATTGC Dhaf_4701 5021378 - 5019648 - | ABC-1 domain protein TERM 6955 5021840 - 5021809 - H 100 -9.5 -5.41746 | gap 1, opp_overlap 5021827 AATCGTTCAAAAAAA GGC-ACTTCCCGCC CAGCC GGCGGAAAATCGCC TTTTTCTTTAATTTT TERM 6956 5021827 - 5021840 + H 90 -5.9 -5.43974 | opp_overlap 5021809 ACTTCCCGCCCAGCC GGCGG AAAA TCGCC TTTTTCTTTAATTTT Dhaf_4703 5021992 - 5023293 + | putative transcriptional regulator TERM 6957 5023386 - 5023356 - T 88 -6.9 -5.0916 | opp_overlap 5023356, overlap 5023350 GGGCGAACATAAAAA GCGAGTCCG TTGGCCTAAAACG CGGACTCGC TTTTGAATAGACTAT TERM 6958 5023356 - 5023386 + T 76 -7.6 -4.19258 | opp_overlap 5023356 5023350 GGGCGAACATAAAAA GCGAGTCCGT TGGCCTAAAAC GCGGACTCGC TTTTGAATAGACTAT Dhaf_4704 5024452 - 5023475 - | beta-lactamase domain protein Dhaf_4705 5024639 - 5024496 - | hypothetical protein TERM 6959 5024645 - 5024609 - G 100 -18.1 -4.77036 | opp_overlap 5024610, overlap 5024610 CCTTACTATGAAAAA TGGCCCATGATCCGCAT CGC ATTCGGATCATGGGCCT TTCCTTCTCTCGCCA TERM 6960 5024644 - 5024610 - G 100 -21.6 -3.4574 | opp_overlap 5024610, overlap 5024609 CTTACTATGAAAAAT GGCCCATGATCCGCAT CGC ATTCGGATCATGGGCC TTTCCTTCTCTCGCC TERM 6961 5024610 - 5024644 + g 100 -21.6 -4.04174 | opp_overlap 5024610 5024609 CTTACTATGAAAAAT GGCCCATGATCCGCAT CGC ATTCGGATCATGGGCC TTTCCTTCTCTCGCC Dhaf_4706 5025500 - 5024676 - | hypothetical protein Dhaf_4707 5025738 - 5025962 + | protein of unknown function DUF1659 TERM 6962 5026185 - 5026136 - g 93 -14.6 -3.36175 | gap 1, opp_overlap 5026141, overlap 5026139 AACCGTCATTGAGAA GAATATTTTTCTTGCTC-CCAGC GGCGA GCTGGTGAGCAAGAGAGATATTC GGATCGTGGGAACCA TERM 6963 5026182 - 5026139 - g 82 -10.5 -3.8211 | gap 1, opp_overlap 5026141, overlap 5026136 CGTCATTGAGAAGAA TATTTTTCTTGCTC-CCAGC GGCGA GCTGGTGAGCAAGAGAGATA TTCGGATCGTGGGAA TERM 6964 5026141 - 5026180 + G 83 -13.1 -3.07043 | gap 1, opp_overlap 5026139 5026136 TCATTGAGAAGAATA TTTTTCTTGCTC-CCAGC GGCGA GCTGGTGAGCAAGAGAGA TATTCGGATCGTGGG Dhaf_4708 5025996 - 5026235 + | hypothetical protein TERM 6965 5026279 - 5026314 + T 100 -20.7 -3.19668 | opp_overlap 5026279, overlap 5026284 GCCCAGTAAGAAAAA CCAAAGGATACCCCT GGTTAA AGGGGTATCCTTTGG TTGGCTTAACTCCTC TERM 6966 5026314 - 5026279 - T 100 -20.7 -5.1356 | opp_overlap 5026279 5026284 GCCCAGTAAGAAAAA CCAAAGGATACCCCT GGTTAA AGGGGTATCCTTTGG TTGGCTTAACTCCTC TERM 6967 5026284 - 5026309 + T 100 -13.4 -3.95986 | opp_overlap 5026279, overlap 5026279 GTAAGAAAAACCAAA GGATACCCCT GGTTAA AGGGGTATCC TTTGGTTGGCTTAAC Dhaf_4709 5026824 - 5026366 - | hypothetical protein Dhaf_4710 5027277 - 5027008 - | hypothetical protein TERM 6968 5027903 - 5027915 + G 75 -7.7 -4.27441 | AGTCACAGTCAATGT GCTGA ACT TCAGC TTTCTTCCTGATGCT Dhaf_4711 5027541 - 5028422 + | hypothetical protein TERM 6969 5028436 - 5028475 + T 100 -10 -4.56367 | opp_overlap 5028436, overlap 5028438 AGAAGGATGGCAAAA GACTCCCCTATGCAGTTT CCTC AAACTGCACGGAGGAGCC TTTCTTTATCAGCTC TERM 6970 5028475 - 5028436 - T 100 -14.4 -4.17425 | opp_overlap 5028436 5028438 AGAAGGATGGCAAAA GACTCCCCTATGCAGTTT CCTC AAACTGCACGGAGGAGCC TTTCTTTATCAGCTC TERM 6971 5028438 - 5028473 + T 76 -11.2 -2.59135 | opp_overlap 5028436, overlap 5028436 AAGGATGGCAAAAGA CTCCCCTATGCAGTTT CCTC AAACTGCACGGAGGAG CCTTTCTTTATCAGC Dhaf_4712 5028959 - 5028489 - | SsrA-binding protein TERM 6972 5029136 - 5029109 - R 100 -16.4 -5.0538 | opp_overlap 5029115 GCTCAGTGCAAAAAA GAAGCAGGGGAA CTTA CTCCCCTGCTTC CCAGCCTAAGTCGTT Dhaf_4713 5031167 - 5029152 - | V-type H(+)-translocating pyrophosphatase TERM 6973 5029444 - 5029434 - G 75 -5.4 -4.7497 | overlap 5029414 CTTACCGAGTAAAAA TCCT ACC AGGA TCGGAGAGCCGATGG Dhaf_4714 5031615 - 5031391 - | preprotein translocase, SecG subunit TERM 6974 5031724 - 5031681 - R 70 -8 -3.70149 | opp_overlap 5031681 5031714 CCTATACCAGGTAAA CCGCCACTTCTCCCCTGTTT TAAG ACACAGAGAGGGTGTGGCGG TCATTCCCTATGGTT Dhaf_4715 5033094 - 5031817 - | Phosphopyruvate hydratase TERM 6975 5032247 - 5032235 - G 70 -7.7 -3.85698 | TCTTCTTCGGACAAA CCATC CTC GATGG AAACGATGGGGTACT Dhaf_4716 5034653 - 5033118 - | phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Dhaf_4717 5035417 - 5034650 - | Triose-phosphate isomerase TERM 6976 5035207 - 5035194 - G 73 -9.5 -3.28791 | ATCTCTCCCGTATAA GCCCC ATCG GGGGC ATAAAACATATCCTG TERM 6977 5035356 - 5035368 + g 85 -7.7 -4.78753 | ACCGCATATTCCTGA GTCTC CCG GAGAC TTTTATTCATCTTCC Dhaf_4718 5036635 - 5035448 - | Phosphoglycerate kinase TERM 6978 5036863 - 5036849 - R 86 -7 -4.99568 | opp_overlap 5036851, overlap 5036851 CAATATTAAAGAAAA CCCGGC TTC GCCGTG CCTTAAACCCATGCT Dhaf_4719 5038452 - 5037049 - | RNA polymerase, sigma 54 subunit, RpoN TERM 6979 5037300 - 5037288 - G 73 -4.7 -4.81851 | opp_overlap 5037288 5037289, overlap 5037289 ACTTAAACTCAAAAA TCCCC CGG GGGGT TTGGATATATTTATT TERM 6980 5037289 - 5037299 + g 73 -8.2 -3.79565 | opp_overlap 5037288 5037289, overlap 5037288 CTTAAACTCAAAAAT CCCC CGG GGGG TTTGGATATATTTAT TERM 6981 5037952 - 5037972 + g 79 -11.1 -3.5032 | overlap 5037950 TTCCACTTCCTCAAG GGGAAGCTG GAG CTGCTTCCC TATTTCCTCTAAAGA TERM 6982 5038140 - 5038118 - G 71 -2.7 -5.00616 | gap 1, opp_overlap 5038129, overlap 5038119 5038126 5038127 CCTGCCGCTAAAAAA GGCTCAAAGC GGGT GCTTTGC-CC GGCGTCCGGGTCATA Dhaf_4720 5039408 - 5038455 - | protein of unknown function DUF199 TERM 6983 5038813 - 5038799 - G 83 -12.8 -3.09492 | TCTCGAATTCCAACA GCGCCC GGT GGGCGC CGATAAAGCCCAGAA Dhaf_4721 5040828 - 5039455 - | protein of unknown function UPF0052 and CofD Dhaf_4722 5041718 - 5040825 - | hypothetical protein Dhaf_4723 5042942 - 5041755 - | extracellular solute-binding protein family 1 TERM 6984 5043089 - 5043071 - R 100 -8.8 -4.66609 | opp_overlap 5043071 5043070 5043074 CACTTCATTGAAAAA CTCTCCCG GGA CGGGATAG GTTTGAGTCCGCCCC Dhaf_4724 5044795 - 5043050 - | Radical SAM domain protein TERM 6985 5043139 - 5043119 - G 100 -8.2 -5.40072 | overlap 5043121 CTTGTTGTAAAAAAA CAGCAGCC AGCGG GGCTGCGG CTCCTGGAAATACTC TERM 6986 5043137 - 5043121 - G 83 -9.4 -4.34482 | overlap 5043119 TGTTGTAAAAAAACA GCAGCC AGCGG GGCTGC GGCTCCTGGAAATAC Dhaf_4725 5044970 - 5046271 + | Peptidoglycan-binding domain 1 protein Dhaf_4726 5046399 - 5046277 - | hypothetical protein TERM 6987 5046406 - 5046366 - G 100 -14.1 -4.41353 | opp_overlap 5046368, overlap 5046368 CGATACAGACGAAAA CAGGGCTGTGCCAAACC ATCATCA GGTTTTGCACAGCCCTT TCCTAAGTTTATCCT TERM 6988 5046368 - 5046404 + g 100 -16.7 -3.83169 | opp_overlap 5046366 5046368 ATACAGACGAAAACA GGGCTGTGCCAAACC ATCATCA GGTTTTGCACAGCCC TTTCCTAAGTTTATC TERM 6989 5046404 - 5046368 - G 100 -16.7 -3.80595 | opp_overlap 5046368, overlap 5046366 ATACAGACGAAAACA GGGCTGTGCCAAACC ATCATCA GGTTTTGCACAGCCC TTTCCTAAGTTTATC TERM 6990 5046449 - 5046439 - R 71 -6.8 -4.19506 | ATCTTAACTGTAAAA TCCC CCC GGGA AAAGAATGGGGGCAA Dhaf_4727 5047500 - 5046427 - | polysaccharide deacetylase TERM 6991 5048874 - 5048851 - gR 70 -7.4 -3.75517 | overlap 5048853 ACTGGATAAAAGCAA CATCGCCCTA ACCA TAGGGCAAAG CGAATCTCTGACAGC TERM 6992 5048872 - 5048853 - gR 71 -8.6 -3.45405 | overlap 5048851 TGGATAAAAGCAACA TCGCCCTA ACCA TAGGGCAA AGCGAATCTCTGACA Dhaf_4729 5049881 - 5049693 - | hypothetical protein Dhaf_4728 5047826 - 5049748 + | Ig domain protein group 2 domain protein TERM 6993 5049797 - 5049831 + gT 100 -18.8 -5.07941 | opp_overlap 5049804 CTTCACCCTGGATTT TGCCAAAGAGAGTCTT GCA AAGACCCTCTTTGGCA TTTTTCTGTCCTTTT TERM 6994 5049824 - 5049804 - GT 80 -10.5 -3.54424 | opp_overlap 5049797 CTGGATTTTGCCAAA GAGAGTCTT GCA AAGACCCTC TTTGGCATTTTTCTG Dhaf_4730 5050671 - 5049859 - | Cof-like hydrolase TERM 6995 5050099 - 5050072 - G 71 -9.3 -3.53224 | CAGCCCTTGGGCAAA GGTCAACAAAG TGTTCC CTTTGTTAACC TCCGGATGACCCATC TERM 6996 5050754 - 5050807 + H 78 -9.4 -3.57462 | gap 2, overlap 5050759 TCCTCTTGACGCCAG GCATTTTTTGTATTATGGTTATATAC ACAA GTATATAACCATAATACT--AGATGC TTTACCACTGAACTC TERM 6997 5050759 - 5050804 + H 100 -15.9 -2.91695 | overlap 5050754 TTGACGCCAGGCATT TTTTGTATTATGGTTATATAC ACAA GTATATAACCATAATACTAGA TGCTTTACCACTGAA Dhaf_4731 5050934 - 5051302 + | transcriptional regulator, GntR family TERM 6998 5052078 - 5052064 - g 77 -2.8 -5.1963 | overlap 5052065 CTTAACGAACAAAAA CTTGGC AAC ACCAAA TCAGTCATGATCTAC Dhaf_4732 5051329 - 5052201 + | ABC transporter related TERM 6999 5052796 - 5052821 + G 71 -6.9 -4.21303 | gap 1, opp_overlap 5052796, overlap 5052796 5052800 TGGGCTGGGTACAAT CC-TGCTGAGCA TCC TGCTCGGTATGG TTTATAGTTCTTTTT Dhaf_4733 5052203 - 5052991 + | hypothetical protein TERM 7000 5053172 - 5053123 - T 100 -11 -5.80817 | gap 1, opp_overlap 5053123 TCCAATACAAAAAAA TTGAACTGCATTTCCCATTGTTA TTTGC CAGCAATGGGAG-TGCAGTTCAA TTCTATCTTATGGCC TERM 7001 5053123 - 5053172 + T 100 -14.7 -3.72788 | gap 1, opp_overlap 5053123 TCCAATACAAAAAAA TTGAACTGCATTTCCCATTGTT ATTTGCC AGCAATGGGA-GTGCAGTTCAA TTCTATCTTATGGCC TERM 7002 5053298 - 5053277 - T 83 -11.5 -3.02461 | overlap 5053265 TAACCCTCCCTAAGA CCCCCGCCT TTAT AGGCGGCGG GTACCCAAGGGCGGC Dhaf_4734 5056159 - 5053337 - | excinuclease ABC, A subunit Dhaf_4735 5058900 - 5056849 - | excinuclease ABC, B subunit TERM 7003 5056916 - 5056932 + g 74 -10.8 -2.77242 | overlap 5056915 TCTCGCTTGCGGGCA CGGCCC TGGGT GGGCCG CTTATACTTATTCTC TERM 7004 5057640 - 5057612 - G 78 -12.4 -2.66316 | opp_overlap 5057601, overlap 5057609 TCCCCGATCAGATCA TCGATCTGGCCC TTGGT GGGCCGGACCGA AATCTCCGGATCCAA TERM 7005 5057669 - 5057658 - G 73 -7.2 -4.18018 | TCTCCGGATCCAAAA GCCC GGTA GGGC GAATAATTTGCTCCA TERM 7006 5059017 - 5059034 + r 74 -7 -4.39347 | opp_overlap 5059017, overlap 5059031 AAACAAAACAAAAAA GCCGAA CATATT TTCGGC TTTTCGCTGTTTTTT TERM 7007 5059034 - 5059017 - R 100 -7 -5.95449 | opp_overlap 5059017 5059031 AAACAAAACAAAAAA GCCGAA CATATT TTCGGC TTTTCGCTGTTTTTT TERM 7008 5059031 - 5059043 + r 73 -2.6 -5.19212 | opp_overlap 5059017, overlap 5059017 AGCCGAACATATTTT CGGC TTTTC GCTG TTTTTTACTGGTAAT Dhaf_4736 5060531 - 5059077 - | ABC-type sugar transport system periplasmic component-like protein TERM 7009 5059265 - 5059301 + g 71 -3.8 -4.69027 | overlap 5059266 CCAAAACATTGCCCT TTTCATCCAGATATTC GCGGA GAATTTCTGTATGAAC TTTTTCAGTCACTTT TERM 7010 5060153 - 5060166 + g 74 -9.5 -3.53224 | CTTTGGCTTTCACTC CGGGC GGCA GCCCG TTTAACGCCAGAATA TERM 7011 5060727 - 5060712 - R 84 -6.1 -5.04385 | opp_overlap 5060701 5060704 5060712 GATAGTGCCAAAAAA GCACC GTTTTT GGTGC TTATCATGAGTATAT Dhaf_4737 5061823 - 5060786 - | hypothetical protein TERM 7012 5060853 - 5060877 + g 71 -2.8 -4.99035 | overlap 5060855 AAATCTGTCTTCATG CTATCGACTT GATCA AAGTCGACCG TTTTTGTATAAATAG TERM 7013 5061987 - 5061949 - H 91 -8.3 -4.59109 | gap 1, opp_overlap 5061949, overlap 5061950 TACACCGCTCAAAAA GGCTTGTCAGATTCGAAT CCGG ATTCGAATCTGACT-GAC ATCATCTTGGGTAGA TERM 7014 5061987 - 5061950 - H 81 -10.7 -3.34984 | opp_overlap 5061949, overlap 5061949 ACACCGCTCAAAAAG GCTTGTCAGATTCGAAT CCGG ATTCGAATCTGACTGAC ATCATCTTGGGTAGA Dhaf_4738 5062162 - 5063391 + | putative GTP-binding protein TERM 7015 5063442 - 5063389 - T 86 -12.1 -3.02511 | gap 1, opp_overlap 5063398, overlap 5063398 CCGATTTGGGGAATA TGATGAAAA-CCCCTAAACATTGC AGCTAAA ACAATGTTCAGGGGTTTTTCTTCA GGGCTTTGGTCGTGC TERM 7016 5063398 - 5063432 + T 100 -8.7 -5.06816 | opp_overlap 5063389 5063398 GGAATATGATGAAAA CCCCTAAACATTG CAGCTAAAA CAATGTTCAGGGG TTTTTCTTCAGGGCT TERM 7017 5063432 - 5063398 - T 100 -11.6 -4.35461 | opp_overlap 5063398, overlap 5063389 GGAATATGATGAAAA CCCCTAAACATTGC AGCTAAA ACAATGTTCAGGGG TTTTTCTTCAGGGCT Dhaf_4739 5064647 - 5063460 - | carboxyl-terminal protease TERM 7018 5064200 - 5064231 + g 88 -13.2 -3.21925 | gap 1 AGACGGCTTTTTCCT GATCGATGGTGGTGG CGT CCAC-ATCATCGATC TTAATAATCACATCT TERM 7019 5064255 - 5064279 + g 71 -4.2 -4.76644 | overlap 5064247 5064251 5064257 5064258 CACATCTCCAGGCTG TAGTCCGGCT TTAGC GGCCGGAGTG TTTTTAATGGGTCTT Dhaf_4740 5066103 - 5064970 - | Peptidase M23 TERM 7020 5066088 - 5066076 - G 80 -9.1 -4.25104 | opp_overlap 5066075 5066074 5066068 CTGTTGTGAGCAAAA GGGCT ATG AGCCC CCTTCTCTTGGTCAT Dhaf_4741 5067007 - 5066123 - | protein of unknown function DUF214 Dhaf_4742 5067683 - 5066997 - | cell division ATP-binding protein FtsE TERM 7021 5067856 - 5067838 - R 91 -3.8 -5.86609 | GTAAAAAAAGAAAAA CCCGAC TCCAAAC ATCGGG CTCATACTTTATGCT Dhaf_4743 5068139 - 5067879 - | hypothetical protein TERM 7022 5068211 - 5068180 - R 76 -8 -4.10178 | gap 1, overlap 5068185 GAAGAATACTATAAA CGGAACGGCCGCC CACTCCC GGCAGCCG-TCCA AAACTCACTATCTTT TERM 7023 5068207 - 5068185 - R 76 -9.8 -3.34856 | overlap 5068180 ATACTATAAACGGAA CGGCCGCC CACTCCC GGCAGCCG TCCAAAACTCACTAT Dhaf_4744 5069181 - 5068246 - | Transketolase central region Dhaf_4745 5070007 - 5069174 - | Transketolase domain protein TERM 7024 5070055 - 5070079 + r 78 -10 -3.43751 | opp_overlap 5070057, overlap 5070054 5070057 TCATTTTGAAGATTT AAGGCTTGGC CATGA GCCAAGCCTC TCTTTACACTTCTTG TERM 7025 5070077 - 5070057 - R 100 -13.3 -3.18728 | opp_overlap 5070057 5070055 5070054 ATTTTGAAGATTTAA GGCTTGGCC ATG AGCCAAGCC TCTCTTTACACTTCT TERM 7026 5070057 - 5070077 + r 95 -12.6 -3.2789 | opp_overlap 5070057, overlap 5070055 5070054 ATTTTGAAGATTTAA GGCTTGGC CATGA GCCAAGCC TCTCTTTACACTTCT Dhaf_4746 5071275 - 5070168 - | hypothetical protein TERM 7027 5071344 - 5071307 - R 100 -15.1 -4.07885 | gap 1, opp_overlap 5071311 5071318 TATGGTTTTCGAAAA GTAAGGCATATTGA-GCC GAG GGCCTCATTATGCCTTAC GTGTAACTATTCTAG TERM 7028 5071311 - 5071340 + r 74 -10.1 -3.14294 | gap 1, opp_overlap 5071307, overlap 5071318 GTTTTCGAAAAGTAA GGCATATTGA-GCC GAG GGCCTCATTATGCC TTACGTGTAACTATT Dhaf_4747 5073899 - 5071395 - | preprotein translocase, SecA subunit TERM 7029 5073126 - 5073137 + g 81 -5.8 -4.87893 | overlap 5073099 TTGTTCAGTCAAGGT GACC ACCC GGTC TTTTTCATTGACATT TERM 7030 5074043 - 5074070 + r 100 -11.4 -4.32436 | opp_overlap 5074044 5074047, overlap 5074044 AACCATATGCACACA AGAATGGTCTAC CCTC GTAGACCATTCG TTTTAATCATCCTAT TERM 7031 5074044 - 5074069 + r 100 -14.9 -3.18738 | opp_overlap 5074044 5074047, overlap 5074043 ACCATATGCACACAA GAATGGTCTAC CCTC GTAGACCATTC GTTTTAATCATCCTA TERM 7032 5074069 - 5074044 - R 100 -14.9 -3.5399 | opp_overlap 5074044 5074043, overlap 5074047 ACCATATGCACACAA GAATGGTCTAC CCTC GTAGACCATTC GTTTTAATCATCCTA TERM 7033 5074066 - 5074047 - R 88 -10.8 -3.90092 | opp_overlap 5074044 5074043, overlap 5074044 ATATGCACACAAGAA TGGTCTAC CCTC GTAGACCA TTCGTTTTAATCATC Dhaf_4748 5074624 - 5074097 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 7034 5074728 - 5074761 + r 78 -4 -5.16841 | opp_overlap 5074728 TCCATATGCAAAAAA GAAGAATCGTTG TAAATTATGC CAACAATTCTTC TTTTTATTCATGTGA TERM 7035 5074761 - 5074728 - R 87 -6.2 -5.1287 | opp_overlap 5074728 TCCATATGCAAAAAA GAAGAATCGTTG TAAATTATGC CAACAATTCTTC TTTTTATTCATGTGA Dhaf_4749 5075023 - 5074826 - | cold-shock DNA-binding domain protein Dhaf_4750 5075845 - 5075126 - | ABC transporter related Dhaf_4751 5076506 - 5075832 - | polar amino acid ABC transporter, inner membrane subunit TERM 7036 5076687 - 5076659 - R 100 -18.3 -3.73816 | opp_overlap 5076664, overlap 5076664 AACATTATACTGAAA CAAAACGCCCAGC ATT GCTAGGCGTTTTG AGTCATCATCATTCT TERM 7037 5076682 - 5076664 - R 100 -12.4 -4.92385 | opp_overlap 5076664, overlap 5076659 TATACTGAAACAAAA CGCCCAGC ATT GCTAGGCG TTTTGAGTCATCATC TERM 7038 5076664 - 5076682 + r 91 -10.2 -4.21908 | opp_overlap 5076664 5076659 TATACTGAAACAAAA CGCCCAGC ATT GCTAGGCG TTTTGAGTCATCATC Dhaf_4752 5077521 - 5076712 - | extracellular solute-binding protein family 3 TERM 7039 5077047 - 5077059 + g 79 -3.4 -5.2696 | GACCTGTGGTTCCTT GTTG AACAC CAAC TTTTTTACCTTTTAA TERM 7040 5077727 - 5077707 - R 100 -9.8 -5.4477 | opp_overlap 5077710 AAAGCTGTAAAAAAA GCATTGGA TATAC TCCAATGC TCTCACATATATTCT Dhaf_4753 5078047 - 5077754 - | hypothetical protein TERM 7041 5077941 - 5077957 + g 74 -4.4 -4.87665 | gap 1, overlap 5077931 TCTCTGCAACGCTGT GGC-TCG TTTT CGAAGCC TTTTTCTGCATAGAA Dhaf_4754 5078896 - 5078066 - | phosphoribosyltransferase Dhaf_4755 5080779 - 5078908 - | helicase domain protein TERM 7042 5081240 - 5081220 - g 72 -11.1 -2.63818 | opp_overlap 5081219 5081218 5081222, overlap 5081219 5081222 AAGAAAGTAGAAGAG GACCTGGCC AAC GGCAAGGTC GATTTTGGGAAAAAG Dhaf_4756 5080971 - 5081345 + | hypothetical protein TERM 7043 5081368 - 5081389 + T 100 -14.5 -4.22554 | TAACTGGAACCCTGA TCCCCCAAC TGCG GTTGGGGGA TTCTTTCTTGAATGG Dhaf_4757 5081747 - 5081352 - | hypothetical protein Dhaf_4758 5082313 - 5081876 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 7044 5082509 - 5082482 - g 87 -12.6 -3.35088 | overlap 5082497 AAATTTTGCAATTAA TCGGCGGCGGCG AAAT CGGCGGCGCCGA ACAGCATGTCCTGAC TERM 7045 5082509 - 5082497 - g 71 -9.1 -3.53012 | overlap 5082482 TCGGCGGCGGCGAAA TCGGC GGC GCCGA ACAGCATGTCCTGAC Dhaf_4759 5082454 - 5083578 + | glycosyl transferase group 1 TERM 7046 5083582 - 5083640 + T 100 -12.7 -3.68619 | gap 2, opp_overlap 5083573 5083588, overlap 5083588 ACAAGATGCTGACAG CACAAAGCTCTCCTGGGG-AGAA-GTTCC GCT GGAACCTTCTGCCTCAGGAGAGCTTCATA TTTAAGTACGTTGAC TERM 7047 5083634 - 5083588 - T 100 -18.3 -4.0162 | gap 2, opp_overlap 5083582 5083588 TGCTGACAGCACAAA GCTCTCCTG-GGGAGAA-GTTCC GCT GGAACCTTCTGCCTCAGGAGAGC TTCATATTTAAGTAC TERM 7048 5083588 - 5083634 + T 100 -20.5 -3.47029 | gap 2, opp_overlap 5083588, overlap 5083582 TGCTGACAGCACAAA GCTCTCCTGGGG-AGAA-GTTCC GCT GGAACCTTCTGCCTCAGGAGAGC TTCATATTTAAGTAC Dhaf_4760 5084994 - 5083642 - | hypothetical protein Dhaf_4761 5085704 - 5084991 - | RNA polymerase, sigma 28 subunit, SigI Dhaf_4762 5086533 - 5085796 - | glycosyl transferase, WecB/TagA/CpsF family Dhaf_4763 5087678 - 5086692 - | cell shape determining protein, MreB/Mrl family TERM 7049 5087819 - 5087792 - R 100 -13.6 -4.55128 | opp_overlap 5087798 ATCCCTAAACGAAAA GTACAATCTCCC CTGC GGGAGATTATAC ATAATATACCACATT TERM 7050 5087798 - 5087813 + r 71 -9 -3.38768 | opp_overlap 5087792 AAACGAAAAGTACAA TCTCCC CTGC GGGAGA TTATACATAATATAC Dhaf_4764 5088197 - 5087949 - | sporulation transcriptional regulator SpoIIID TERM 7051 5088278 - 5088259 - H 100 -10.8 -5.46698 | opp_overlap 5088261 5088263 CTTAAAATCAAAAAA GACATCCT CAGA AGGATGTC TTCGACTGGTAAATG Dhaf_4765 5088397 - 5088690 + | hypothetical protein TERM 7052 5088800 - 5088838 + F 100 -8.3 -5.00616 | gap 1, opp_overlap 5088805, overlap 5088805 ATCCAGCTTGTAGAC TAAAACCGTTTCTATGCC GTCA GGC-TCGAAACGGTTTTC TTTTTTCGCCAGGCC TERM 7053 5088833 - 5088805 - f 82 -8.2 -4.34402 | gap 1, opp_overlap 5088800 5088805 GCTTGTAGACTAAAA CCGTTTCTATGCC GTCA GGC-TCGAAACGG TTTTCTTTTTTCGCC TERM 7054 5088805 - 5088833 + F 100 -8.2 -5.42198 | gap 1, opp_overlap 5088805, overlap 5088800 GCTTGTAGACTAAAA CCGTTTCTATGCC GTCA GGC-TCGAAACGG TTTTCTTTTTTCGCC TERM 7055 5090624 - 5090654 + G 80 -8.2 -4.44046 | GCGAGATCGGTCTGG GCGGACGGATTAAC ATG GTTATGCAGTCCGC TTTCTTTAAGCTGGC TERM 7056 5090794 - 5090782 - g 70 -7.7 -3.9009 | AAGGCAGTGGACAAA GGGAT TGA ATCCC TGATCAAGGTCAACG TERM 7057 5090943 - 5090916 - g 78 -11.3 -3.37464 | overlap 5090908 CCATGAAGGGGACAA CCTGCCCACCA GCGCTT TTGTGGGCAGG GAAGACGGCACTTTC TERM 7058 5092026 - 5092009 - g 74 -9.9 -3.57792 | GCAGCCATCGCCAAA TTTGCCG CCGG CGGCAAA AGAGTCCGCAAAAAA Dhaf_4766 5088964 - 5092488 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Dhaf_4767 5092533 - 5092706 + | hypothetical protein TERM 7059 5092802 - 5092754 - f 75 -10.5 -2.80977 | opp_overlap 5092759, overlap 5092746 5092759 CCTAAAATTAAACAT TAAAAGAGAAGGGGTTTTGGA AATACAG TCCGAAAACCCTTCTCTTTTT CATTCCAATGCAAAA TERM 7060 5092759 - 5092797 + F 100 -12.6 -4.87291 | opp_overlap 5092754 5092759 AATTAAACATTAAAA GAGAAGGGGTTTTGGA AATACAG TCCGAAAACCCTTCTC TTTTTCATTCCAATG TERM 7061 5092797 - 5092759 - f 100 -10.4 -4.52266 | opp_overlap 5092759, overlap 5092754 AATTAAACATTAAAA GAGAAGGGGTTTTGGA AATACAG TCCGAAAACCCTTCTC TTTTTCATTCCAATG Dhaf_4768 5092882 - 5094138 + | hypothetical protein Dhaf_4769 5095846 - 5094101 - | ABC transporter related TERM 7062 5095063 - 5095041 - G 81 -9.8 -4.08767 | TGGACCGCCTGAAAA GCGGACATCG CCA CGATGACCAC CGATGCCGATTTGAG Dhaf_4770 5097620 - 5095839 - | ABC transporter related TERM 7063 5096214 - 5096231 + g 71 -4.8 -4.56597 | gap 1, opp_overlap 5096196 5096195 GCCGCCGGCTTCACC GGC-GGG AGTAG CCCAGCC TTTTTCCAGGCGGGA TERM 7064 5097662 - 5097643 - R 91 -7.2 -5.27335 | opp_overlap 5097641 5097643 CCTCCTAAAGAAAAA TGATTAGC ATCT GCTAACCA TCTTTAAAATACCTT Dhaf_4771 5098676 - 5097723 - | transcriptional regulator, AraC family Dhaf_4772 5100184 - 5098682 - | ABC transporter related Dhaf_4773 5100917 - 5100198 - | cobalt transport protein Dhaf_4774 5101499 - 5100918 - | hypothetical protein TERM 7065 5100957 - 5100943 - G 71 -7.2 -4.07568 | CCCGCCCTCTCAAAA TGCTTT TTC AAAGCA GCTCTTCCCAGATAG TERM 7066 5101167 - 5101151 - G 73 -5.1 -4.58395 | GCCATTCGCTAAAAA CCACATA CCC CATGCGG ATGGAAGTCCAGTTT TERM 7067 5101575 - 5101562 - R 100 -9.5 -5.40072 | opp_overlap 5101561 5101560 TCTTTTTTAAAAAAA GCGCC TTTG GGCGC AATTTAATGTAAAGA Dhaf_4775 5102106 - 5101681 - | UspA domain protein Dhaf_4776 5102698 - 5102129 - | HPP family protein Dhaf_4777 5103795 - 5102965 - | methyl-accepting chemotaxis sensory transducer Dhaf_4778 5104534 - 5104025 - | Peptidase M23 Dhaf_4779 5106140 - 5104656 - | two component, sigma54 specific, transcriptional regulator, Fis family Dhaf_4780 5108331 - 5106103 - | histidine kinase Dhaf_4781 5109328 - 5108324 - | protein of unknown function DUF534 TERM 7068 5109444 - 5109423 - R 100 -9.5 -4.67123 | opp_overlap 5109423 TCAAAATAAGCAAAA GGAACTGTA AGAT TACAGTCCC TTGATCTATCTTCAG Dhaf_4782 5110658 - 5109456 - | Polysulphide reductase NrfD Dhaf_4783 5111265 - 5110660 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Dhaf_4784 5111978 - 5111262 - | hypothetical protein TERM 7069 5111957 - 5111944 - G 76 -9.5 -3.63805 | opp_overlap 5111943 5111942 AGTTCATAGCCTAAA GCCCG CTCC CGGGC ACTTCCTTCAATTTC Dhaf_4785 5115178 - 5112083 - | molydopterin dinucleotide-binding region TERM 7070 5112630 - 5112640 + g 83 -6.8 -4.93968 | GTCATACAGTTGATG CTGG TGC CCAG TTTTTGATTGTAGAT TERM 7071 5113061 - 5113073 + g 75 -10.5 -3.33696 | opp_overlap 5113051 AATGATGGGACGGCG GGCCC CAT GGGCC TTGCTTAAGACCAGA TERM 7072 5113809 - 5113821 + g 78 -9.1 -4.13014 | opp_overlap 5113801 ACAGTAACCATGGCA TCGCC AAG GGCGA TTTTACCGGTGTAGA TERM 7073 5115080 - 5115102 + g 85 -4.8 -5.49569 | AGGATTGGTGATGGC TTCGCCGG CGATGAC CCGGGGAA TTTTTTCTATTCCTA TERM 7074 5115421 - 5115378 - R 100 -15.6 -2.93549 | opp_overlap 5115389, overlap 5115389 TATGTTGAAGAAGCA GTTTGCAAAAATGTCAGGCT TTTC ACCCTGACATTTTTGCAAAA AATATGAACCCTGAC TERM 7075 5115410 - 5115389 - R 81 -7.3 -4.58663 | opp_overlap 5115389, overlap 5115378 AGCAGTTTGCAAAAA TGTCAGGCT TTTC ACCCTGACA TTTTTGCAAAAAATA TERM 7076 5115389 - 5115410 + r 78 -7.3 -4.57073 | opp_overlap 5115378 5115389 AGCAGTTTGCAAAAA TGTCAGGCT TTTC ACCCTGACA TTTTTGCAAAAAATA TERM 7077 5115454 - 5115424 - R 100 -11.2 -5.0133 | opp_overlap 5115422 5115430, overlap 5115426 5115427 CATTTTTGCAAAAAA TATGAACCCTGACA TTT TGTCAGGGTTCCTC CAATTTTTACTTAGG TERM 7078 5115452 - 5115426 - R 100 -13.8 -4.13561 | opp_overlap 5115422 5115430, overlap 5115424 5115427 TTTTTGCAAAAAATA TGAACCCTGACA TTT TGTCAGGGTTCC TCCAATTTTTACTTA TERM 7079 5115451 - 5115427 - R 100 -17.3 -3.07655 | opp_overlap 5115422 5115430, overlap 5115426 5115424 TTTTGCAAAAAATAT GAACCCTGACA TTT TGTCAGGGTTC CTCCAATTTTTACTT TERM 7080 5115430 - 5115448 + r 95 -13.2 -3.23009 | opp_overlap 5115427 5115426 5115424, overlap 5115422 TGCAAAAAATATGAA CCCTGACA TTT TGTCAGGG TTCCTCCAATTTTTA Dhaf_4786 5117665 - 5115476 - | DNA topoisomerase III TERM 7081 5116853 - 5116866 + g 78 -8.1 -4.40311 | opp_overlap 5116847 TAAATCATAGGCCTG GGGAG GCTG CTCCC TTTTCGCTTCTTTCT TERM 7082 5117825 - 5117781 - R 77 -5 -5.03314 | overlap 5117783 TCCATCCGGAAAAAA GCGCAAGGCTGAATATCCCT TATCC AGAGAAATTCAGCCTGAAAC GAAACGGTGGACAGA Dhaf_4787 5118824 - 5117883 - | SpoIID/LytB domain protein TERM 7083 5118884 - 5118828 - R 100 -14.6 -3.85698 | gap 1, opp_overlap 5118827 5118844 TTCTTTGCGCACAAA GTCCCTCCTCCTCTCATAG-GCCAAGC CCAT GCTTAACACTATGCAAAGGGGAGGGAC AATATGTTTACTCTG Dhaf_4788 5120142 - 5118892 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 7084 5119423 - 5119398 - G 74 -8.9 -3.68324 | opp_overlap 5119412 5119414, overlap 5119396 5119400 5119401 CATTTTGAACAAAGA TATCGCCGCCG GCGG CGGCGGCCATG AGCAGATAGCTGCCT TERM 7085 5119418 - 5119400 - G 82 -11.6 -3.41738 | opp_overlap 5119412 5119414, overlap 5119398 5119396 5119401 TTTTGAACAAAGATA TCGCCGCC GGC GGCGGCGG CCATGAGCAGATAGC TERM 7086 5119417 - 5119401 - G 95 -15.1 -2.64561 | opp_overlap 5119412 5119414, overlap 5119400 5119398 5119396 TTTGAACAAAGATAT CGCCGCC GGC GGCGGCG GCCATGAGCAGATAG TERM 7087 5120186 - 5120203 + r 73 -8.5 -3.57561 | CTATCTATAGGCCAA CAAATCC CCCT GGATTTG TTTAAAAGCTTAGCC Dhaf_4789 5120942 - 5120292 - | hypothetical protein TERM 7088 5121097 - 5121087 - R 86 -6.8 -5.00388 | opp_overlap 5121087, overlap 5121089 TAAACCAAAAAGAAA GAGG TTG CCTC AGACGAGTAAAACTG TERM 7089 5121087 - 5121139 + r 79 -6.7 -4.66609 | gap 3, opp_overlap 5121087 5121089 5121104, overlap 5121102 TAAACCAAAAAGAAA GAGGTTGCCTC-AGA-C-GAGTAAAA CTGC TTTTACTCTGGTTTAGAGACAACCTC TTTTTCAATCGAATG Dhaf_4790 5121574 - 5121176 - | ATP synthase F1, epsilon subunit Dhaf_4791 5122974 - 5121577 - | ATP synthase F1, beta subunit Dhaf_4792 5123856 - 5123011 - | ATP synthase F1, gamma subunit Dhaf_4793 5125421 - 5123913 - | ATP synthase F1, alpha subunit Dhaf_4794 5126001 - 5125465 - | ATP synthase F1, delta subunit Dhaf_4795 5126489 - 5125995 - | ATP synthase F0, B subunit TERM 7090 5126531 - 5126557 + r 100 -16.7 -3.62046 | overlap 5126534 CAGCGATGATTTTTT CAAGGGGGAAC TTAGT GTTCCCCCTTG TTCTTGACGGGCTGG TERM 7091 5126534 - 5126554 + r 100 -12.6 -3.9461 | overlap 5126531 CGATGATTTTTTCAA GGGGGAAC TTAGT GTTCCCCC TTGTTCTTGACGGGC Dhaf_4796 5126832 - 5126602 - | ATP synthase F0, C subunit Dhaf_4797 5127668 - 5126931 - | ATP synthase F0, A subunit Dhaf_4798 5128048 - 5127680 - | ATP synthase I Dhaf_4799 5128253 - 5128023 - | hypothetical protein Dhaf_4800 5128932 - 5128462 - | protein of unknown function DUF955 Dhaf_4801 5129728 - 5128943 - | helix-turn-helix domain protein Dhaf_4802 5130072 - 5130296 + | hypothetical protein TERM 7092 5131579 - 5131552 - g 76 -7 -4.35885 | gap 1, opp_overlap 5131552 5131553 5131555 5131574, overlap 5131553 AGCTACGATAACAAA TGCCTGCTGATCA CAG CGATCAGC-GGCT ATTTCGCTCAATTGG TERM 7093 5131553 - 5131578 + G 73 -9.8 -3.42283 | gap 1, opp_overlap 5131552 5131553, overlap 5131552 5131555 5131574 GCTACGATAACAAAT GCCTGCTGATC ACAGC GATCAGC-GGC TATTTCGCTCAATTG TERM 7094 5131578 - 5131553 - g 73 -10.5 -3.20808 | gap 1, opp_overlap 5131553 5131552 5131555 5131574, overlap 5131552 GCTACGATAACAAAT GCCTGCTGATCA CAG CGATCAGC-GGC TATTTCGCTCAATTG Dhaf_4803 5130733 - 5131803 + | phage-like element pbsx protein XkdK Dhaf_4804 5132047 - 5132970 + | hypothetical protein TERM 7095 5132957 - 5132977 + F 100 -8.3 -4.82819 | opp_overlap 5132960 TTAATTTGATTCTAA GGAGTGCTT TAT GAGCACTTC TTTTGTTATGCTATG Dhaf_4805 5133172 - 5133570 + | hypothetical protein Dhaf_4806 5133570 - 5133938 + | XkdN-like protein TERM 7096 5135075 - 5135085 + G 71 -8.2 -3.70902 | ACCAAAATCGGAGAT GCCG GAA CGGC TTTGGGTATGAGCAG Dhaf_4807 5134136 - 5136220 + | phage tape measure protein TERM 7097 5136264 - 5136247 - f 73 -8.5 -3.59979 | opp_overlap 5136247 TTTTCTTATTCCAAA TTCCCAA ACGT TTGGGAA TTTCACCAATCCTAC TERM 7098 5136247 - 5136264 + F 71 -8.5 -3.56092 | opp_overlap 5136247 TTTTCTTATTCCAAA TTCCCAA ACGT TTGGGAA TTTCACCAATCCTAC Dhaf_4808 5136348 - 5137055 + | Peptidoglycan-binding LysM Dhaf_4809 5137065 - 5138072 + | hypothetical protein Dhaf_4810 5138127 - 5138507 + | hypothetical protein Dhaf_4811 5138504 - 5138920 + | phage protein Dhaf_4812 5138913 - 5139953 + | Baseplate J family protein Dhaf_4813 5139953 - 5140498 + | hypothetical protein TERM 7099 5140640 - 5140630 - g 71 -8.2 -3.76125 | GGAGCTCAAGCCAAA GCCG ATG CGGC GGAGGCTGCTGCCAA Dhaf_4814 5140498 - 5140899 + | hypothetical protein Dhaf_4815 5140923 - 5141681 + | hypothetical protein Dhaf_4816 5141694 - 5142647 + | hypothetical protein Dhaf_4817 5142664 - 5142936 + | hypothetical protein Dhaf_4818 5142938 - 5143081 + | hypothetical protein TERM 7100 5143317 - 5143292 - g 76 -8.9 -3.80877 | overlap 5143290 GGACGTCAGAAAAGA TGCCGAGGTCG ACAC CGCCCTCCGCA CAGATATGGAGTATC Dhaf_4819 5143182 - 5143478 + | hypothetical protein TERM 7101 5143920 - 5143950 + G 72 -10.4 -3.02836 | opp_overlap 5143921, overlap 5143919 5143908 GTATCAACAGACCAA ACTGCCCAGGGG CTAAGTT TCCCTGGGCAGA GTTATTTGCTGATTT TERM 7102 5143949 - 5143921 - g 95 -13.2 -3.94333 | opp_overlap 5143920 5143919 5143908 TATCAACAGACCAAA CTGCCCAGGG GCTAAGTTT CCCTGGGCAG AGTTATTTGCTGATT Dhaf_4820 5143481 - 5144191 + | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD TERM 7103 5144242 - 5144264 + G 73 -5.5 -4.65458 | TCCAGAACTTTTGGG GGCTGCTGC TTGTT GTGGCAGTC TTTATTATTTATCTG Dhaf_4821 5144205 - 5144567 + | hypothetical protein Dhaf_4822 5145773 - 5144649 - | UDP-N-acetylglucosamine 2-epimerase TERM 7104 5145465 - 5145450 - G 72 -6 -4.47328 | opp_overlap 5145464, overlap 5145461 AATTTGAGCATAAAA GGCTGC TAAA GCCGCC ACAAAGGTGGTTGTG TERM 7105 5146076 - 5146052 - H 100 -13.7 -3.89822 | CACGCAGCGGAGAAA GGTTGGAAACA GGA CGTTTCCAACC CGCCATTGAGCAGGA Dhaf_4823 5146054 - 5146212 + | hypothetical protein TERM 7106 5146255 - 5146213 - T 80 -9.9 -3.62224 | gap 1, opp_overlap 5146223, overlap 5146215 AGATCCTTTCAATAA TATGCTG-ACAGGGCTAGGG AAAT CCCTAGCCCTTTTCTGCATT ATATTGAGTTGGGAA TERM 7107 5146253 - 5146215 - T 95 -12.5 -3.38991 | gap 1, opp_overlap 5146223, overlap 5146213 ATCCTTTCAATAATA TGCTG-ACAGGGCTAGGG AAAT CCCTAGCCCTTTTCTGCA TTATATTGAGTTGGG TERM 7108 5146223 - 5146244 + T 100 -15.9 -4.49939 | opp_overlap 5146215 5146213 AATAATATGCTGACA GGGCTAGGG AAAT CCCTAGCCC TTTTCTGCATTATAT Dhaf_4824 5146721 - 5146254 - | CMP/dCMP deaminase zinc-binding Dhaf_4825 5147347 - 5146718 - | uracil phosphoribosyltransferase Dhaf_4826 5148613 - 5147360 - | Glycine hydroxymethyltransferase TERM 7109 5147902 - 5147922 + g 78 -8.1 -4.43844 | opp_overlap 5147899 GGCATAGAATCAGTC CCCCCCGGG GGC CCCGCAGGG TTTTATGAGTGGTGG TERM 7110 5148224 - 5148200 - G 73 -9.9 -3.31869 | overlap 5148198 5148203 GACAAAGTTATAATA CATCCCGGAGA TAT TCACCGGGCTG CCGTGGGTTAAATGA Dhaf_4827 5149212 - 5148664 - | hypothetical protein Dhaf_4828 5149686 - 5149237 - | sugar-phosphate isomerase, RpiB/LacA/LacB family Dhaf_4829 5150310 - 5149864 - | protein tyrosine phosphatase TERM 7111 5149959 - 5149977 + g 73 -7.4 -4.2349 | CACTTCCGCCCCAGG GATCCGGA ATA TCCTGATC TTTTCCGTCTCCGGC Dhaf_4830 5150910 - 5150323 - | protein of unknown function DUF204 Dhaf_4831 5152029 - 5150983 - | Sua5/YciO/YrdC/YwlC family protein TERM 7112 5151766 - 5151797 + g 73 -7.2 -4.14392 | opp_overlap 5151765 5151766, overlap 5151758 CTTATCTGCACAAAG GGCTGCTTGAGGGG TCCA TTCCTCCACCAGCC TTTTGACCATTGCCA Dhaf_4832 5152892 - 5152035 - | modification methylase, HemK family Dhaf_4833 5153959 - 5152892 - | peptide chain release factor 1 TERM 7113 5153139 - 5153158 + g 87 -5.6 -5.52807 | gap 1, opp_overlap 5153136 CGCTCCAGGAGACGG GCCC-GCAG AAC CCGCAGGGC TTTTTCTTTGTTCTT Dhaf_4834 5154068 - 5154163 + | hypothetical protein TERM 7114 5154301 - 5154272 - T 100 -18.1 -3.67976 | opp_overlap 5154278, overlap 5154278 GCCAGCAACTGTAAA GAAAAAGCAGAGC ATGC GCTCTGCTTTTTC TCCAGCAACGACCGC TERM 7115 5154295 - 5154278 - T 100 -11.3 -5.29846 | opp_overlap 5154278, overlap 5154272 AACTGTAAAGAAAAA GCAGAGC ATGC GCTCTGC TTTTTCTCCAGCAAC TERM 7116 5154278 - 5154295 + T 100 -11.3 -4.82901 | opp_overlap 5154278 5154272 AACTGTAAAGAAAAA GCAGAGC ATGC GCTCTGC TTTTTCTCCAGCAAC TERM 7117 5154307 - 5154325 + T 71 -8.8 -3.38072 | opp_overlap 5154310, overlap 5154310 CTGCTTTTTCTCCAG CAACGACC GCA GGCCGTTG TTCATATTACATGCC Dhaf_4835 5154529 - 5154332 - | ribosomal protein L31 Dhaf_4836 5155368 - 5154676 - | Peptidase M23 TERM 7118 5154814 - 5154830 + g 79 -3.6 -5.32944 | CTGCTCAACCCACTC TCCCGG ACTCA CCAGGA TTTTTTGATTATGGG Dhaf_4837 5156434 - 5155442 - | fructose-1,6-bisphosphatase, class II TERM 7119 5155767 - 5155751 - G 71 -10.1 -2.87132 | CTCTCCGCCCAGACA CCGCAGC GCA GCTGCAG CCAGTACCCCTTCCG TERM 7120 5156022 - 5156049 + g 85 -9.8 -4.45083 | overlap 5156024 GCATCCAAGTGTATT TTGCCTTTGGCC AGGG GGCCGACGGCGA TTTTGTCCATATACA TERM 7121 5156310 - 5156326 + g 80 -9.4 -4.20367 | CGCATGGCTTGTACT GCCGCA TCATC TGCGGC TTCTTTATTCCCGCG TERM 7122 5156625 - 5156595 - R 100 -8.2 -4.90079 | opp_overlap 5156595 AGTCGAATAAGAAAA GCCCTATCAGCCGA AAA TCGTCTGTCAGAGC TTTCATCCCAAGGTG Dhaf_4838 5157313 - 5156672 - | transaldolase TERM 7123 5157003 - 5156989 - G 74 -2.8 -5.02074 | opp_overlap 5156989 GCACCGCTGAAAAAA CTAAGG TCA CATTAG TTTTAATGCCTTCGG TERM 7124 5157217 - 5157237 + g 76 -9.7 -3.7282 | CCCTGCCTTCTTTGG CCACCAAGC TGG GATTGGTGG TTATTCCTCCGATAA Dhaf_4839 5158179 - 5157325 - | fructose-1,6-bisphosphate aldolase, class II Dhaf_4840 5158853 - 5158182 - | hypothetical protein TERM 7125 5158213 - 5158240 + g 85 -5.7 -5.13722 | gap 1 GCCTTACAAAAATGT CCGTGCTGTGTA CAATT TA-ACAGTACGG TTTTATTTTCGTCCA Dhaf_4841 5159344 - 5158988 - | response regulator receiver protein TERM 7126 5159273 - 5159299 + g 70 -9.6 -3.13522 | opp_overlap 5159271 5159296, overlap 5159271 TTTAACTAGATGACC TTCTTCTTTGAA GGT TTCAAAGAGGAG TCTTCGTACCCCCAT TERM 7127 5159362 - 5159376 + r 72 -10 -2.77537 | overlap 5159361 5159358 5159364 ATTGCCCCCTTTCGC CAGTGG TCC CCACTG CTATTATTTATGGAT Dhaf_4842 5160568 - 5159384 - | alanine racemase TERM 7128 5159967 - 5159955 - G 75 -3.3 -5.07567 | GGATAGTCCAAAAAA GCAGC ACT GTTGC ACACATGTTTCCACA TERM 7129 5160399 - 5160413 + g 71 -7 -4.12942 | opp_overlap 5160399, overlap 5160391 GTGGTCACCGCAAAA GCCGGG CAG CCCAGC TTTTGAAGGGTTTGG TERM 7130 5160413 - 5160399 - G 78 -9.2 -4.13767 | opp_overlap 5160399 5160391 GTGGTCACCGCAAAA GCCGGG CAG CCCAGC TTTTGAAGGGTTTGG Dhaf_4843 5161686 - 5160604 - | Methicillin resistance protein TERM 7131 5161129 - 5161149 + g 77 -3.8 -5.14563 | overlap 5161131 5161140 CAAATCTTCTTTCGT GCCGACGC GGATG GCGACGCC TTTTTTCGTGGCCAA TERM 7132 5161773 - 5161807 + r 100 -12.2 -4.06892 | opp_overlap 5161775 5161778, overlap 5161778 TTTTAGTTTGCCTAA AACGATTCCATGGCTC GGG GAGCCATGGAATTGCC TTTGTATCACCTTAT TERM 7133 5161805 - 5161775 - R 100 -17 -4.08216 | opp_overlap 5161773 5161778, overlap 5161778 TTAGTTTGCCTAAAA CGATTCCATGGCTC GGG GAGCCATGGAATTG CCTTTGTATCACCTT TERM 7134 5161778 - 5161802 + r 100 -17.3 -3.35695 | opp_overlap 5161775 5161778, overlap 5161773 GTTTGCCTAAAACGA TTCCATGGCTC GGG GAGCCATGGAA TTGCCTTTGTATCAC TERM 7135 5161802 - 5161778 - R 100 -17.3 -3.08032 | opp_overlap 5161778 5161773, overlap 5161775 GTTTGCCTAAAACGA TTCCATGGCTC GGG GAGCCATGGAA TTGCCTTTGTATCAC Dhaf_4844 5163417 - 5161819 - | CTP synthase TERM 7136 5162280 - 5162294 + g 75 -3.5 -5.07652 | opp_overlap 5162280 5162281, overlap 5162280 5162281 GCATGCCTAAGCAAA TCCCT AAGAA GGGGA TTTTATTTTCCCGGG TERM 7137 5163529 - 5163551 + r 91 -7.7 -4.88293 | opp_overlap 5163529 ATGCACATAAAAAAA GCTAGTCCG CAAGA CGCACTAGC TTTATTTTTACCATT TERM 7138 5163551 - 5163529 - R 100 -8.4 -5.72616 | opp_overlap 5163529 ATGCACATAAAAAAA GCTAGTCCGC AAG ACGCACTAGC TTTATTTTTACCATT Dhaf_4845 5164083 - 5163646 - | DNA-directed RNA polymerase delta subunit, putative Dhaf_4846 5165864 - 5164179 - | arginyl-tRNA synthetase TERM 7139 5165012 - 5165022 + g 71 -6.8 -4.22652 | opp_overlap 5165008 CATAGATATAACCCT GCTG CTC CAGC TTTTCCATGGTGTCC TERM 7140 5165447 - 5165483 + g 90 -8.1 -5.15969 | gap 1 TGCCCATATGGAGCA GTCC-GGTGGGATTGG CGCTGA CGAATTCCACCTGGAC TTTTTTCCCTTGGCC Dhaf_4847 5166292 - 5165861 - | Domain of unknown function DUF1934 TERM 7141 5166517 - 5166539 + r 75 -9.1 -3.72695 | TCTGTGGCGTGGCGG CTTGGGCGA AACCC TCGCCCGGG TTTCGTCCGCCAAAT TERM 7142 5166573 - 5166597 + r 100 -13.7 -3.85698 | TCCTGCTCAATGGCG GGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCAGAGGG TERM 7143 5166732 - 5166745 + r 70 -3.7 -4.77986 | overlap 5166733 TGTAGGGCAAGACAT CCGGC CCAA GCCGC TTTTTCCGTCTTTAC TERM 7144 5166853 - 5166841 - R 72 -7.7 -3.87869 | GGAATGCCCCATAAA GAGTC TCA GACTC AGGCTTCCCAAACTC TERM 7145 5167216 - 5167182 - R 100 -11.6 -4.69326 | AGACCTAACACAAAA GCAAGATGGCAATG TCTCATC CATTACCACCTTGC TCCTAGTATACCCTA Dhaf_4848 5168631 - 5167267 - | Propeptide PepSY amd peptidase M4 TERM 7146 5168252 - 5168279 + g 74 -9.3 -3.72576 | gap 1 AGATTTTTATCATCT TCTGCAGTGGGT GTGTG ACCCACTG-AGA TTTGATAGGCCAGGC Dhaf_4849 5169329 - 5168643 - | spore cortex-lytic enzyme TERM 7147 5169472 - 5169450 - R 100 -11.3 -4.95155 | opp_overlap 5169454 GGGATACCATAAAAA GACAGCCCC TGGGG AGGGCTGTC TCCGTATCCGTTGAT Dhaf_4850 5170693 - 5169521 - | Alanine--glyoxylate transaminase TERM 7148 5170954 - 5170928 - R 85 -9.4 -4.17698 | ATTGAGACAGATAAA GCGCTTATAGGT TAA ACCACTAAGCGC TCCAAATTCTGCTTT Dhaf_4851 5172414 - 5171023 - | asparaginyl-tRNA synthetase Dhaf_4852 5172629 - 5173963 + | Glutamate dehydrogenase (NADP(+)) TERM 7149 5174014 - 5174056 + F 100 -18.7 -5.1675 | gap 1, opp_overlap 5174014 CCGGTACGAAAAAAA CAAGAG-AAGGCGTTGTCCC GCAG GGGATAGCGCCTTTCTCTTG TTTTTTCCTCAATCG TERM 7150 5174056 - 5174014 - f 100 -14.3 -5.52384 | gap 1, opp_overlap 5174014 CCGGTACGAAAAAAA CAAGAGAA-GGCGTTGTCCC GCAG GGGATAGCGCCTTTCTCTTG TTTTTTCCTCAATCG TERM 7151 5174483 - 5174446 - g 95 -15.7 -2.78596 | opp_overlap 5174436 5174456, overlap 5174449 5174456 TATCCGGCGATGATA GCAGCCCAAATTCGCCC CCGG AGGCGAATTTGGGCTAT ACCAAAGCGCTTATT TERM 7152 5174480 - 5174449 - g 100 -19.6 -2.66316 | opp_overlap 5174436 5174456, overlap 5174446 5174456 CCGGCGATGATAGCA GCCCAAATTCGCCC CCGG AGGCGAATTTGGGC TATACCAAAGCGCTT TERM 7153 5174820 - 5174805 - g 73 -4.6 -4.68512 | overlap 5174806 CCACAACAAAAAGAA CCGGAG AAAG CCCCAG AAGAAACCGCCTCCG Dhaf_4853 5174184 - 5175089 + | hypothetical protein TERM 7154 5175096 - 5175129 + T 82 -10.4 -3.57601 | gap 1, opp_overlap 5175089, overlap 5175089 5175092 TCGAACTAGCTCAAG GGGCTTATGACCTGC TCTAC GCAGC-CATAAGCCC TTACTGTTGTTTTTT Dhaf_4854 5175494 - 5175162 - | hypothetical protein Dhaf_4855 5176364 - 5175525 - | hypothetical protein Dhaf_4856 5177557 - 5176367 - | protein of unknown function DUF201 TERM 7155 5177445 - 5177455 + g 93 -8.2 -5.15634 | ACATCCGCCAGCTGA GCCC CTT GGGC TTTTTTCCTGCGATC Dhaf_4857 5178645 - 5177548 - | Radical SAM domain protein TERM 7156 5178053 - 5178065 + g 80 -4.8 -5.02074 | overlap 5178049 ATAAGATACCCCATG GCCT TGGCC AGGC TTTTTTGCCCCATCC TERM 7157 5178205 - 5178227 + g 70 -7.6 -3.84719 | opp_overlap 5178192 5178191 5178189 5178204 ATCTGGGGATACGAT CCCCGGCGAT AGC ATCACCGGCG TTTGGGTTTCCCGCT TERM 7158 5178736 - 5178726 - R 70 -5.4 -4.49556 | GCTTTATTAAAGAAA GAAG AAG CTTC AGTTTATATTATCAA Dhaf_4858 5179587 - 5178748 - | tRNA synthetase class II (G H P and S) TERM 7159 5179915 - 5179876 - R 89 -12.2 -3.35088 | gap 1, opp_overlap 5179875 5179876, overlap 5179880 5179883 AAAGGCTCCAAGGAA CACAGCAGGCCTGGCTC ATCAGGA GAGCCAGGCC-GCCACG AGTCATTTTTTACAT TERM 7160 5179911 - 5179880 - R 100 -13.8 -3.18366 | gap 1, opp_overlap 5179875 5179876, overlap 5179876 5179883 GCTCCAAGGAACACA GCAGGCCTGGCTC ATCAGGA GAGCCAGGCC-GC CACGAGTCATTTTTT TERM 7161 5179909 - 5179883 - R 100 -15.2 -2.78606 | opp_overlap 5179875 5179876, overlap 5179880 5179876 CCAAGGAACACAGCA GGCCTGGCTC ATCAGGA GAGCCAGGCC GCCACGAGTCATTTT Dhaf_4859 5181465 - 5179981 - | Ethanolamine utilisation EutA Dhaf_4860 5182407 - 5181481 - | Ethanolamine ammonia-lyase TERM 7162 5181819 - 5181784 - G 79 -3.3 -5.26918 | gap 1 ATATCTGACAAAAAA GGGGTCGCCTGTCT TTATGCCTG AGAC-GGCAAGCCC TTGGGTTAAGGCAGG TERM 7163 5182246 - 5182271 + g 74 -11.2 -3.00704 | AAGCGTGACCATGTC TTCCTGCCCA AGCTCA TGGGCAGGAG TATCCTTTAAGCCCT TERM 7164 5182455 - 5182437 - R 71 -6.6 -4.19817 | TCTACTTATCGAAAA CAGACGGA TCC CCCGCCCG TTCTGTAAGCTGTCC Dhaf_4861 5183787 - 5182423 - | Ethanolamine ammonia lyase large subunit Dhaf_4862 5184145 - 5183852 - | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TERM 7165 5184036 - 5184023 - G 74 -9.5 -3.55444 | opp_overlap 5184021 5184019 5184023 TCCGTATTTCTCAAA GCGGG GTCT CCCGC TCTCTTCATAAGTTA TERM 7166 5184023 - 5184036 + g 70 -9.5 -3.14581 | opp_overlap 5184023, overlap 5184021 5184019 TCCGTATTTCTCAAA GCGGG GTCT CCCGC TCTCTTCATAAGTTA Dhaf_4863 5184862 - 5184161 - | cobalamin adenosyltransferase Dhaf_4864 5185522 - 5184875 - | microcompartments protein TERM 7167 5185216 - 5185197 - G 80 -3 -5.36441 | gap 1 TGGCTATAGAAAAAA GCTTCATTT TCC AAAT-AAGC AATGCATGCGTCAAT Dhaf_4865 5186009 - 5185566 - | ethanolamine utilization protein, EutP Dhaf_4866 5186242 - 5187156 + | transcriptional regulator, LysR family TERM 7168 5187186 - 5187216 + T 100 -19.9 -4.42851 | opp_overlap 5187199 AAATGGGTCGGGGAA CTCCCCGGGAAAT CGGCA ATTTCCCGGGGAG TTTTAGCTTTATTCA Dhaf_4867 5189211 - 5187229 - | type I phosphodiesterase/nucleotide pyrophosphatase Dhaf_4868 5190720 - 5189368 - | transposase IS4 family protein TERM 7169 5189508 - 5189494 - G 75 -5.7 -4.5032 | TAGATTAAGAACAAA CGTCA TTAAC TGACG TAGTGCTGTTTTCAA TERM 7170 5191055 - 5190999 - R 100 -10.5 -4.30809 | gap 1, opp_overlap 5191009 5191021, overlap 5191013 GAATACTTATTAAAA GTTTTCCTAATGAACCACTAAAGGAA GCCCTG TTCCTTTAGTGGTTCATT-GTTAAGC AATCATTATATCAAT TERM 7171 5191009 - 5191046 + r 100 -18.8 -3.62775 | opp_overlap 5190999 5191013, overlap 5191021 TAAAAGTTTTCCTAA TGAACCACTAAAGGAA GCCCTG TTCCTTTAGTGGTTCA TTGTTAAGCAATCAT TERM 7172 5191042 - 5191013 - R 100 -13.8 -3.33815 | opp_overlap 5191009 5191021, overlap 5190999 AGTTTTCCTAATGAA CCACTAAAGGAA GCCCTG TTCCTTTAGTGG TTCATTGTTAAGCAA TERM 7173 5192276 - 5192308 + r 71 -8.4 -3.50869 | gap 1, overlap 5192280 ATCATTTTTGGGATT TCTCCCCGCCAGCAC AAGG GTGCTGG-GGGCTGA TTGTATGGCATCCTC Dhaf_4870 5193979 - 5192564 - | trimethylamine methyltransferase TERM 7174 5193808 - 5193822 + g 76 -2.1 -5.2894 | TATCCACCATTGCTT CGGTA ATGAA TACTG TTTTGTTTTCTATTT Dhaf_4871 5194809 - 5194006 - | Methionine synthase Dhaf_4872 5195461 - 5194829 - | cobalamin B12-binding domain protein TERM 7175 5196793 - 5196812 + G 73 -7.8 -4.11484 | TACATCCCATTATTT CAGCGAGG AATG CCTGGCTG TTTTACAAAATTACC Dhaf_4873 5195720 - 5197171 + | putative sigma54 specific transcriptional regulator TERM 7176 5198428 - 5198401 - g 77 -6.4 -4.61231 | CTATATCGGTAAAAA CGCAACAAAA GAAGTGGA TTTCGTTGCG GTGCGGCGGGATGAG Dhaf_4874 5197427 - 5198626 + | ATPase TERM 7177 5198641 - 5198680 + F 100 -14.4 -4.30448 | gap 1, opp_overlap 5198641 5198643 AGCCCCCGCTAAAAA GGCCTGTGCTCT-TGCGTT ATA AACGCCTGGAGCACAGGTC TTTTAAATTACCTTT TERM 7178 5198680 - 5198641 - f 100 -10 -4.56775 | gap 1, opp_overlap 5198641, overlap 5198643 AGCCCCCGCTAAAAA GGCCTGTGCT-CTTGCGTT ATA AACGCCTGGAGCACAGGTC TTTTAAATTACCTTT TERM 7179 5198678 - 5198643 - f 76 -11.2 -2.60032 | gap 1, opp_overlap 5198641, overlap 5198641 CCCCCGCTAAAAAGG CCTGTGCT-CTTGCGTT ATA AACGCCTGGAGCACAGG TCTTTTAAATTACCT Dhaf_4875 5198894 - 5199562 + | hypothetical protein TERM 7180 5199630 - 5199606 - T 100 -10.7 -5.08169 | opp_overlap 5199606 ACACATGCTAAAAAA GACCGGAGC ACCACCA GCCCCGGTC TTACTCTATTAATTC Dhaf_4876 5200951 - 5199701 - | diaminopimelate decarboxylase TERM 7181 5201157 - 5201134 - R 100 -14.6 -5.50499 | opp_overlap 5201134 TGACAGTGAAAAAAA CGGCTGCGAG TACC CTCGCAACCG TTTTTTAAGGCAAAA TERM 7182 5201134 - 5201157 + r 100 -12.4 -5.00616 | opp_overlap 5201134 TGACAGTGAAAAAAA CGGCTGCGAG TACC CTCGCAACCG TTTTTTAAGGCAAAA Dhaf_4877 5201656 - 5201444 - | hypothetical protein Dhaf_4878 5202526 - 5201738 - | protein of unknown function DUF81 TERM 7183 5201996 - 5201981 - G 91 -3.2 -5.75538 | TTGAAAAAAGAAAAA GGTAAC GGTG GTTGCC TGGAAGACGTCCTTG TERM 7184 5202846 - 5202828 - g 73 -5.2 -4.57353 | CCCGAGGAGATAAAA CAGGCATT CTG ATCGCCTG CATCCCTGCCCATTA Dhaf_4879 5202650 - 5203138 + | ybaK/ebsC protein Dhaf_4880 5203256 - 5204344 + | hypothetical protein TERM 7185 5204401 - 5204391 - f 100 -8.2 -5.28983 | overlap 5204393 GTTAAAACAGAAAAA GGCC CCT GGCC TAGAGGAGGAAAAAA Dhaf_4881 5204419 - 5204577 + | hypothetical protein TERM 7186 5204600 - 5204575 - T 100 -7.7 -5.39755 | opp_overlap 5204575 TATAACGAGAAAAAA TAGTCACGA ATAAACCA TCGTGACTA TTTTTATACACTAAT TERM 7187 5204575 - 5204600 + T 91 -7.7 -4.86001 | opp_overlap 5204575 TATAACGAGAAAAAA TAGTCACGA ATAAACCA TCGTGACTA TTTTTATACACTAAT Dhaf_4882 5206237 - 5204615 - | glutaminyl-tRNA synthetase TERM 7188 5204888 - 5204910 + g 83 -4.8 -5.27938 | gap 1 CGTCCCCTTGACCTT GCGGC-CGG TAAATC CTGTGCCGC TTTTTGTTTCCGGAT Dhaf_4883 5206749 - 5206333 - | GreA/GreB family elongation factor TERM 7189 5206816 - 5206795 - H 79 -10.9 -3.20431 | overlap 5206793 5206791 5206789 ATAGCTAAATATAGA GCGACTATC GCCA GATAGCCGC TGTCAAAAGTTTATG TERM 7190 5207246 - 5207269 + H 100 -9.7 -5.04597 | TCGTCCGAATATTCA GAGTCAATC GCTAAG GATTGACTC TTTTTATATATAAAT Dhaf_4884 5207365 - 5208747 + | amino acid carrier protein TERM 7191 5208838 - 5208800 - T 100 -13.9 -4.04318 | opp_overlap 5208794 5208804 5208806 5208808 5208810, overlap 5208803 CGCATAGATGACAAA CTACGAGACACCTCTCC CTTGC GGAGAGGTGTCTCTCTG TGCCTTATCCTATCC TERM 7192 5208835 - 5208803 - T 100 -16.4 -3.05982 | opp_overlap 5208794 5208804 5208806 5208808 5208810, overlap 5208800 ATAGATGACAAACTA CGAGACACCTCTCC CTTGC GGAGAGGTGTCTCT CTGTGCCTTATCCTA TERM 7193 5208804 - 5208834 + T 100 -19.9 -2.96979 | opp_overlap 5208803 5208800, overlap 5208794 5208806 5208808 5208810 TAGATGACAAACTAC GAGACACCTCTCC CTTGC GGAGAGGTGTCTC TCTGTGCCTTATCCT TERM 7194 5208806 - 5208832 + T 100 -16.7 -3.03453 | opp_overlap 5208803 5208800, overlap 5208804 5208794 5208808 5208810 GATGACAAACTACGA GACACCTCTCC CTTGC GGAGAGGTGTC TCTCTGTGCCTTATC TERM 7195 5208808 - 5208830 + T 100 -13.5 -3.06708 | opp_overlap 5208803 5208800, overlap 5208806 5208804 5208794 5208810 TGACAAACTACGAGA CACCTCTCC CTTGC GGAGAGGTG TCTCTCTGTGCCTTA TERM 7196 5208810 - 5208828 + T 77 -10.3 -3.08465 | opp_overlap 5208803 5208800, overlap 5208808 5208806 5208804 5208794 ACAAACTACGAGACA CCTCTCC CTTGC GGAGAGG TGTCTCTCTGTGCCT Dhaf_4885 5209228 - 5208848 - | Glyoxalase/bleomycin resistance protein/dioxygenase Dhaf_4886 5209375 - 5210097 + | hydrolase Dhaf_4887 5210642 - 5210094 - | hypothetical protein TERM 7197 5210714 - 5210756 + r 73 -7.1 -4.12296 | gap 1, opp_overlap 5210719, overlap 5210719 TTGCAAGCCCTGGAC AAAAAGCCAGATATT-CCGC ACCC GCGGGAATATCTGGCTTAAC TTCTTTAGTTCTGAC TERM 7198 5210719 - 5210751 + r 100 -15.8 -3.35183 | gap 1, opp_overlap 5210719, overlap 5210714 AGCCCTGGACAAAAA GCCAGATATT-CCGC ACCC GCGGGAATATCTGGC TTAACTTCTTTAGTT TERM 7199 5210751 - 5210719 - R 100 -15.8 -4.83169 | gap 1, opp_overlap 5210719 5210714 AGCCCTGGACAAAAA GCCAGATATT-CCGC ACCC GCGGGAATATCTGGC TTAACTTCTTTAGTT Dhaf_4888 5212845 - 5210779 - | methyl-accepting chemotaxis sensory transducer Dhaf_4889 5213553 - 5213227 - | Thioredoxin domain protein TERM 7200 5213647 - 5213601 - R 71 -6.7 -4.18494 | gap 2, overlap 5213603 CACCTTGATTCAAAA CAG-ACGAAGGTC-AAGGTCTCC AAA AGAGAGCGCAGACCTTCGTCCTG CCGGGTTTCTTGCTT TERM 7201 5213644 - 5213603 - R 78 -9.5 -3.69216 | gap 1, overlap 5213601 CCTTGATTCAAAACA GACGAAGGTC-AAGGTCTCC AAA AGAGAGCGCAGACCTTCGTC CTGCCGGGTTTCTTG Dhaf_4890 5213953 - 5213666 - | microcompartments protein Dhaf_4891 5214615 - 5213974 - | Propanediol utilization protein Dhaf_4892 5216104 - 5214617 - | acetaldehyde dehydrogenase (acetylating) Dhaf_4893 5216676 - 5216125 - | microcompartments protein Dhaf_4894 5217368 - 5216706 - | protein of unknown function DUF861 cupin_3 Dhaf_4895 5217994 - 5217446 - | microcompartments protein Dhaf_4896 5219324 - 5217996 - | Respiratory-chain NADH dehydrogenase domain 51 kDa subunit Dhaf_4897 5219605 - 5219345 - | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Dhaf_4898 5219913 - 5219602 - | microcompartments protein Dhaf_4899 5220771 - 5219929 - | ethanolamine utilization protein EutJ family protein Dhaf_4900 5221424 - 5220759 - | hypothetical protein Dhaf_4901 5221923 - 5221465 - | hypothetical protein Dhaf_4902 5222273 - 5221920 - | microcompartments protein Dhaf_4903 5222516 - 5222346 - | hypothetical protein TERM 7202 5222494 - 5222518 + g 95 -13.7 -3.89346 | TCCTGCTCAATGGCG GGTTGGAAACG TCC TGTTTCCAACC TTTCTCCGCTGCAGG Dhaf_4904 5224072 - 5223089 - | glycyl-radical enzyme activating protein family Dhaf_4905 5226695 - 5224149 - | Formate C-acetyltransferase TERM 7203 5226184 - 5226169 - G 76 -9 -3.85698 | opp_overlap 5226158 5226152 TTCCCTTCCCAGAAA GGGAAG ATTT CTTCCC GGAGGATGCGCTTAT Dhaf_4906 5228283 - 5226742 - | acetaldehyde dehydrogenase (acetylating) TERM 7204 5227097 - 5227107 + g 77 -4.6 -5.00616 | GTATTCACAAGTACT CTCG ATA CGGG TTTTTTCAGGGCGAA TERM 7205 5227876 - 5227866 - G 77 -4 -5.06451 | overlap 5227869 GATGAGGTGAAAAAA CAAT GGC ATTG CCTGATTTGATAGCA Dhaf_4907 5228628 - 5228338 - | microcompartments protein Dhaf_4908 5228951 - 5228655 - | microcompartments protein TERM 7206 5228743 - 5228762 + g 75 -5.6 -4.82901 | overlap 5228742 5228741 GTCAGTTCTCCAATT GCTGCGGC GGCC GCTGCACC TTTTTCTACCGCCGA TERM 7207 5229176 - 5229144 - R 100 -12.1 -5.1287 | opp_overlap 5229144 CGGAGAGTGAAAAAA GCGGCTATCAGAA ACGAAAG CCCTGATAGCCGC TTAGTTAAGTTGCAG TERM 7208 5229144 - 5229176 + r 81 -10.7 -3.4052 | opp_overlap 5229144 CGGAGAGTGAAAAAA GCGGCTATCAG AAACGAAAGCC CTGATAGCCGC TTAGTTAAGTTGCAG Dhaf_4909 5230788 - 5229205 - | choline/carnitine/betaine transporter TERM 7209 5230779 - 5230789 + g 73 -5.4 -4.6526 | TTTTCTCCAGCTTCT CTTG TAA CAAG TTTTTCACCCTTTCT Dhaf_4910 5233188 - 5231140 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 7210 5231709 - 5231734 + g 78 -9.1 -4.07885 | gap 1 TGGTGTTAAGGCCGC CGTATTCTCCCA GAA TGGGAG-GTACG TTTTCCCCAACAATC TERM 7211 5233657 - 5233642 - H 74 -4 -5.00138 | TATTCAAAGTAAAAA TACCCT ATAA AAGGTA AATACTAGAAGAAGG Dhaf_4911 5233681 - 5234592 + | transcriptional regulator, LysR family TERM 7212 5234616 - 5234641 + T 91 -10.6 -4.15698 | GGCCTGGTTTTTAAT GCTGAGATAA CTTTGT TTATCTCAGC TTATTTATGTCGATG Dhaf_4912 5235617 - 5234730 - | transcriptional regulator, LysR family TERM 7213 5234774 - 5234788 + g 78 -5.7 -4.66609 | ATTTCTTAGCTGCAG GTGTC AATGG GACAC TTTTTAGATAACATA TERM 7214 5235550 - 5235562 + g 80 -6.3 -4.75219 | TAGAGTTCCTGGGCT GCTTT GGA AAAGC TTTTATTCCTGCTTA TERM 7215 5236165 - 5236142 - g 71 -3.8 -4.75404 | overlap 5236144 AAACTGGATGAAAAA GGCATCAATC CCTG GACCGATGTC CTGACTGAAGCTGAA TERM 7216 5236391 - 5236381 - g 77 -6.8 -4.60041 | ACGCATCCTGAAAAA CAGC GGT GCTG AGAAAGTCTATGGCC Dhaf_4913 5235749 - 5236939 + | protein of unknown function DUF129 TERM 7217 5236985 - 5236958 - T 100 -13.4 -4.92756 | opp_overlap 5236958 5236980 AGCACTAAAAAGAAA CCCTGGCCGCTC CTTG GAGTGACCAGGG TTCTTTGCGCTGGTA TERM 7218 5236958 - 5236985 + T 100 -13.4 -3.94634 | opp_overlap 5236958, overlap 5236980 AGCACTAAAAAGAAA CCCTGGCCGCTC CTTG GAGTGACCAGGG TTCTTTGCGCTGGTA TERM 7219 5237003 - 5237020 + T 71 -8.5 -3.53444 | opp_overlap 5237003 CTTTGCGCTGGTAAA TTCCCAA GCGC TTGGGAA TTTCGGGGGGAATCA TERM 7220 5237020 - 5237003 - T 71 -8.5 -3.53012 | opp_overlap 5237003 CTTTGCGCTGGTAAA TTCCCAA GCGC TTGGGAA TTTCGGGGGGAATCA TERM 7221 5237060 - 5237077 + T 70 -7.1 -3.85909 | opp_overlap 5237060, overlap 5237055 GTCCTGTTTTTCAAA TTTCCAA ACGT TTGGAAA TTTCAGTTTGGATAA Dhaf_4914 5237593 - 5237111 - | protein of unknown function DUF163 TERM 7222 5237217 - 5237232 + g 71 -4.6 -4.4959 | opp_overlap 5237219, overlap 5237219 AGACGGGAAAAAGAC CAGCGG TAAT CCGCTC TTTTCCTTACTTCCC Dhaf_4915 5238858 - 5237701 - | 2-alkenal reductase Dhaf_4916 5239691 - 5238879 - | beta-lactamase domain protein TERM 7223 5239371 - 5239352 - G 71 -9.2 -3.46647 | overlap 5239350 GGGAGGTAGGAAAGA CACGGACC CGCA GGCCCGCG CAAGTAAAAGCATCC TERM 7224 5239790 - 5239751 - R 75 -3.2 -5.24129 | gap 1, opp_overlap 5239765, overlap 5239765 TTTGTCTATAAAAAA CATTTTCAAAATAATTTTG CGG CAAAAT-ACTTTAGAAATG AAAAACTGAGGCTTA TERM 7225 5239816 - 5239796 - R 100 -11.2 -5.04601 | opp_overlap 5239795 5239794 TTTAGAAATGAAAAA CTGAGGCT TATTT AGCCTCAG CGTTTGCGTCAGACG Dhaf_4917 5240447 - 5239803 - | Tetratricopeptide TPR_2 repeat protein Dhaf_4918 5242566 - 5240560 - | Trimethylamine-N-oxide reductase (cytochrome c) TERM 7226 5241203 - 5241191 - G 71 -9.1 -3.55203 | overlap 5241195 AAAACCTCTTCCAAA CCCAG ACG CTGGG CCAGCTCCGTAAAAA TERM 7227 5241694 - 5241737 + g 100 -19.8 -2.64091 | gap 1, overlap 5241697 GCCGCTATAGCGCTG TAAGCCGTATCCGGCCAGG ATCGTGA CC-GGCCGGGTACGGCTTA TGGTCTGGGCTAATT TERM 7228 5241697 - 5241734 + g 100 -17.1 -3.47078 | gap 1, overlap 5241694 GCTATAGCGCTGTAA GCCGTATCCGGCCAGG ATCGTGA CC-GGCCGGGTACGGC TTATGGTCTGGGCTA TERM 7229 5242292 - 5242307 + g 71 -4 -4.67943 | CAGGAACCCACTTCT TCAAGG GTCT CTTTGA TTTTATCTGTTAAGA Dhaf_4919 5244030 - 5242600 - | Radical SAM domain protein TERM 7230 5243370 - 5243386 + g 78 -5.1 -4.89838 | GGACGACACTGATAT CTTCCTG CTC CAGAAAG TTTTGTATTTCTTCG TERM 7231 5243522 - 5243511 - G 73 -7.2 -4.16943 | TTTGATAGTTCAAAA GGGG CTCA CCCC CGAAAAAGTCCACTT TERM 7232 5244100 - 5244072 - R 100 -11.7 -4.3207 | opp_overlap 5244064 5244059 5244077, overlap 5244074 AGATAAACATAGAAA CAGAACCCGCCTG AAT CAGGTGGGTTCTC GCGACCTATGTTTAA TERM 7233 5244098 - 5244074 - R 100 -14.3 -3.74227 | opp_overlap 5244064 5244059 5244077, overlap 5244072 ATAAACATAGAAACA GAACCCGCCTG AAT CAGGTGGGTTC TCGCGACCTATGTTT TERM 7234 5244077 - 5244095 + r 95 -12.4 -3.29829 | opp_overlap 5244074 5244072, overlap 5244064 5244059 AACATAGAAACAGAA CCCGCCTG AAT CAGGTGGG TTCTCGCGACCTATG Dhaf_4920 5244306 - 5244166 - | hypothetical protein Dhaf_4921 5244933 - 5244385 - | hypothetical protein TERM 7235 5245107 - 5245081 - R 75 -5.8 -4.68724 | GCAGCCAATACAAAA GCCACACTGCTT GGT ATACAGCATGGC TTAAAAACAACTTCC Dhaf_4922 5246110 - 5245409 - | ABC transporter related Dhaf_4923 5246910 - 5246116 - | ABC transporter related Dhaf_4924 5247979 - 5246903 - | inner-membrane translocator TERM 7236 5247654 - 5247642 - G 72 -6.2 -4.4648 | ATCCCGATCAGAAAA CCGG CTACT CCGG CGAAAAGAGCACCGA Dhaf_4925 5248871 - 5247990 - | inner-membrane translocator TERM 7237 5248353 - 5248378 + g 72 -6.1 -4.4261 | gap 1 CGCCCCCTTGTCCTC TGAGCAGGCGCG CAT CGC-CTTGCCCA TTTTGGTCTTGCCGG TERM 7238 5248606 - 5248620 + g 82 -11.4 -3.28712 | opp_overlap 5248592, overlap 5248616 ACGGCCAAGGAGGTT GCCGCT CTA AGCGGC TTGTAGGCCAGGCGC TERM 7239 5248987 - 5248960 - R 100 -15.6 -4.01137 | opp_overlap 5248963 CACATAACGGATAAA GGGCTGCCGAGT ATGT ACTCGGCAGTCC TCTCGACAAACCATT TERM 7240 5248963 - 5248984 + r 100 -14.5 -2.62184 | opp_overlap 5248960 ATAACGGATAAAGGG CTGCCGAGT ATGT ACTCGGCAG TCCTCTCGACAAACC Dhaf_4926 5250211 - 5249021 - | Extracellular ligand-binding receptor TERM 7241 5250461 - 5250438 - R 100 -8.2 -5.75822 | opp_overlap 5250438 TACAAATTAAAAAAA GCTTGCATTC CTTA GAACACAAGC GTTTTTGATAGATAA TERM 7242 5250670 - 5250651 - R 88 -10 -4.21922 | overlap 5250646 CCATGCAAAATTAAA GCCGTCCA TTTC TGAACGGC TGAACATCGATGTGC Dhaf_4927 5252004 - 5250721 - | Adenylosuccinate synthase TERM 7243 5251106 - 5251081 - G 81 -11.1 -3.75169 | gap 1 GATCACCGCATCAAA CCAGCCGCAGCG GCG CGCC-CGGCCGG TGGTGGTGCCGAATT TERM 7244 5251714 - 5251727 + g 73 -2.3 -5.01042 | AGCGTTGGAGCTGAT CAGGA GTTT TCCCG TTTTTACTTTCCGTT Dhaf_4928 5253354 - 5252053 - | adenylosuccinate lyase TERM 7245 5252539 - 5252572 + g 75 -6.1 -4.5442 | gap 1 CTGCTCACAGGCGAT GGGAT-TTCGTTTATG AGG CATGGCCGAAGATCCC TTTTGTCCTTCGGCA TERM 7246 5253152 - 5253137 - G 75 -3.2 -5.00884 | opp_overlap 5253150 ACTCCCTGCAAAAAA GCGATG AGAT CATGGC GAACCACCTTTTCTA TERM 7247 5253629 - 5253606 - R 100 -11.8 -4.20696 | opp_overlap 5253608, overlap 5253615 CTATTAATCTGAAAA GCCTAAAGAC TTTA GTCCTTAGGC CGAAAGATGCTGGCG Dhaf_4929 5254958 - 5253624 - | replicative DNA helicase TERM 7248 5254120 - 5254106 - G 100 -10 -5.15167 | TATCATCAATAAAAA TCTCCG CCT CGGAGA GAGGGCCTACCGCCC Dhaf_4930 5256937 - 5254979 - | Sigma 54 interacting domain protein TERM 7249 5255981 - 5255971 - G 71 -6.8 -4.19704 | overlap 5255974 GAAGCTTATTTAAAA GGAC AGG GTCC ATCTCCCCGATTTCA Dhaf_4931 5257410 - 5256964 - | ribosomal protein L9 Dhaf_4932 5258415 - 5257453 - | hypothetical protein TERM 7250 5257605 - 5257591 - G 71 -4.2 -4.67904 | overlap 5257600 GACGAACCGGAAAAA CCCTGA TAA CCAAGG TTTTTGGAGCAGGGC Dhaf_4933 5258757 - 5258452 - | hypothetical protein TERM 7251 5258871 - 5258890 + r 72 -9.2 -3.12788 | opp_overlap 5258872, overlap 5258869 5258868 AAGGAAAGTATAAAA AGGGGAGC AACA GCTCCCCC TCATTCTTTATTCTA TERM 7252 5258889 - 5258872 - R 100 -12.7 -5.05228 | opp_overlap 5258871 5258869 5258868 AGGAAAGTATAAAAA GGGGAGC AACA GCTCCCC CTCATTCTTTATTCT Dhaf_4934 5259128 - 5258898 - | ribosomal protein S18 Dhaf_4935 5259563 - 5259150 - | single-strand binding protein Dhaf_4936 5259866 - 5259579 - | ribosomal protein S6 Dhaf_4937 5261113 - 5260013 - | GTP-binding protein YchF TERM 7253 5261093 - 5261063 - G 85 -10.6 -4.00756 | opp_overlap 5261053 TATGGCATTAAATAA TGTTGATTTTCCTA CAT TAGGCAAACCAACA ATCCCTGCATGCAAT TERM 7254 5261201 - 5261213 + r 82 -7.7 -4.57073 | overlap 5261210 CTTTCCCTTAGGATT GCTCA GGA TGAGC TTTTTGAAGAACCTC Dhaf_4938 5261393 - 5261193 - | protein of unknown function DUF951 Dhaf_4939 5262241 - 5261450 - | hypothetical protein TERM 7255 5262674 - 5262650 - R 93 -13.7 -2.62263 | opp_overlap 5262655, overlap 5262655 ACCCCGCCTATAGCA GAAAAGCACCC TCA AGGTGCTTTTC CGCATATCAATGACT TERM 7256 5262655 - 5262669 + r 73 -7.1 -4.13014 | opp_overlap 5262650 5262655 GCCTATAGCAGAAAA GCACC CTCAA GGTGC TTTTCCGCATATCAA TERM 7257 5262669 - 5262655 - R 82 -7.8 -4.50976 | opp_overlap 5262655, overlap 5262650 GCCTATAGCAGAAAA GCACCC TCA AGGTGC TTTTCCGCATATCAA Dhaf_4941 5263307 - 5262681 - | CBS domain containing protein Dhaf_4942 5263841 - 5263440 - | TPR repeat-containing protein Dhaf_4943 5264515 - 5263838 - | hydrogenase accessory protein HypB Dhaf_4944 5264856 - 5264512 - | hydrogenase nickel insertion protein HypA Dhaf_4945 5265989 - 5264958 - | hypothetical protein TERM 7258 5265083 - 5265099 + g 70 -2.1 -4.91511 | opp_overlap 5265083 GAACGACCAACAGGA GGAGGAA GGC TGCCGCC TTTTTATAATGGAAT TERM 7259 5265163 - 5265151 - G 74 -6.3 -4.371 | GTGATCAGACTAAAA CCATT GCC AATGG CTGCCGTAAGCATCG TERM 7260 5266536 - 5266512 - g 76 -9.3 -3.86346 | opp_overlap 5266515 5266522, overlap 5266515 GCAGGGGTCCACAAA GAACTTCCCTC TGT GGGAGAAGTTC ATCTCACCGGTATTG Dhaf_4946 5266107 - 5266676 + | sporulation protein YyaC TERM 7261 5266773 - 5266724 - T 100 -13.9 -3.39505 | gap 1, opp_overlap 5266733 5266737, overlap 5266737 AGCTGATATTCATAA CTCAACGAGCAAAGAGACCGTC GCCATAA GACAGTCTCTTCG-TCATTGAG GGGATCGCTATATGG TERM 7262 5266761 - 5266737 - T 72 -7.9 -3.85362 | opp_overlap 5266733 5266737, overlap 5266724 AACTCAACGAGCAAA GAGACCGTC GCCATAA GACAGTCTC TTCGTCATTGAGGGG TERM 7263 5266895 - 5266852 - T 100 -23.4 -3.14931 | opp_overlap 5266865, overlap 5266865 TGCATCCGGCACGAA CTTTGTCCCCAAACGCGACA ACGT TGTCGCGTTTGGGGACAATA TCAGGCGGCCGGGAA TERM 7264 5266865 - 5266882 + T 89 -11.3 -3.54129 | opp_overlap 5266865 5266852 AACTTTGTCCCCAAA CGCGACA ACGT TGTCGCG TTTGGGGACAATATC TERM 7265 5266882 - 5266865 - T 89 -11.3 -3.53343 | opp_overlap 5266865, overlap 5266852 AACTTTGTCCCCAAA CGCGACA ACGT TGTCGCG TTTGGGGACAATATC Dhaf_4947 5266991 - 5266896 - | hypothetical protein TERM 7266 5267167 - 5267142 - R 82 -7.6 -4.57581 | opp_overlap 5267142 ATTGTAAACAATAAA GCCTTCAATC ATTTTA GCTTGAAGGC TTTTCCGCAATAATG TERM 7267 5267142 - 5267167 + r 76 -7.6 -4.10161 | opp_overlap 5267142 ATTGTAAACAATAAA GCCTTCAATC ATTTTA GCTTGAAGGC TTTTCCGCAATAATG Dhaf_4948 5268184 - 5267240 - | hypothetical protein Dhaf_4949 5268635 - 5268177 - | hypothetical protein TERM 7268 5269077 - 5269038 - R 74 -5 -4.8269 | opp_overlap 5269039, overlap 5269039 GAGAACTATTAAAAA TGGGGTTGTCGCAG TCCACACCAACG TTGCGACAACCCCT TCTTCATTTAAATAC TERM 7269 5269039 - 5269076 + r 95 -11.4 -3.90425 | opp_overlap 5269038 5269039 AGAACTATTAAAAAT GGGGTTGTCGCAGT CCACACCAAC GTTGCGACAACCCC TTCTTCATTTAAATA TERM 7270 5269076 - 5269039 - R 71 -8.5 -3.48529 | opp_overlap 5269039, overlap 5269038 AGAACTATTAAAAAT GGGGTTGTCGCAG TCCACACCAACG TTGCGACAACCCC TTCTTCATTTAAATA Dhaf_4951 5269620 - 5269120 - | hypothetical protein Dhaf_4952 5270338 - 5269649 - | protein of unknown function DUF554 TERM 7271 5270707 - 5270722 + r 74 -7.6 -3.98236 | opp_overlap 5270707 AAGTGCAAAAGAAAA TGTTCC ACGT GGAACA TTTCTAATCAACTTT TERM 7272 5270722 - 5270707 - R 95 -7.6 -5.10163 | opp_overlap 5270707 AAGTGCAAAAGAAAA TGTTCC ACGT GGAACA TTTCTAATCAACTTT Dhaf_4953 5271577 - 5270726 - | parB-like partition protein Dhaf_4954 5272331 - 5271570 - | Cobyrinic acid ac-diamide synthase TERM 7273 5272223 - 5272233 + g 73 -2.4 -5.1615 | opp_overlap 5272223 GGGGATCCAGATCAA GGAG CAG CACC TTTTTTCCCTGTTCA TERM 7274 5272521 - 5272509 - R 100 -10.5 -5.7827 | opp_overlap 5272509 AAGATAAATAAAAAA GCGCC CAA GGCGC TTCTCTTAAAATCTT TERM 7275 5272509 - 5272521 + r 82 -10.5 -3.68726 | opp_overlap 5272509 AAGATAAATAAAAAA GCGCC CAA GGCGC TTCTCTTAAAATCTT Dhaf_4955 5273280 - 5272561 - | methyltransferase GidB Dhaf_4956 5275183 - 5273270 - | glucose inhibited division protein A TERM 7276 5273337 - 5273326 - G 78 -5.8 -4.77079 | GATAGACCAATAAAA CGGA GATA TCCG CCGGTGTCACTCCTG TERM 7277 5273573 - 5273590 + g 77 -4.1 -5.00851 | opp_overlap 5273567 TTCATCATACTCTGC CAGCTGA GGGA TAAGCTG TTTTATTTCGTTAAT Dhaf_4957 5276571 - 5275192 - | tRNA modification GTPase TrmE TERM 7278 5276081 - 5276096 + g 73 -3.3 -5.00616 | GTCTCCATCACCTGA TCCTT AAGCAA AAGGA TTTTTTGAGAAAGCA TERM 7279 5276700 - 5276681 - R 100 -12.2 -5.90981 | TGACAGTAAAAAAAA GAGGGGTA ACCT TACCCCTC AGGAAATTTCTTTTG Dhaf_4958 5277337 - 5276699 - | single-stranded nucleic acid binding R3H domain protein Dhaf_4959 5278054 - 5277359 - | 60 kDa inner membrane insertion protein Dhaf_4960 5278611 - 5278276 - | ribonuclease P protein component TERM 7280 5278468 - 5278458 - G 71 -8.2 -3.75024 | opp_overlap 5278457 CCCGATTACGAACAA CGGC ATT GCCG ACCTTTTTGGAAGCA TERM 7281 5278736 - 5278719 - R 100 -9.1 -4.62783 | overlap 5278701 TATTCATTTGAAAAA GGCCACA AGAT TGCGGCC TTAAGCTGATAATTT Dhaf_4961 5278871 - 5278737 - | ribosomal protein L34