TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.501764 %AT, 4874643 nt, 37649 terms. Intergenic: 0.578197 %AT, H2T: 697637 nt, 3608 terms; T2T: 166463 nt, 2338 terms; H2H: 239721 nt, 3248 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|224367124|ref|NC_012108.1| Desulfobacterium autotrophicum HRM2, complete genome (length 5589073) TERM 1 466 - 455 - g 80 -4.4 -5.14563 | opp_overlap 455 CTGCTGATGAAAAAA GAAC CTAT GTTC TTGGTGCCCTTTTTG TERM 2 808 - 788 - g 70 -8.3 -3.71873 | overlap 798 TGACCCAGATTGAAA TGAGCAGAA GCA TGCTGCTCA TGGTCATGAAAAGAA dnaN 1 - 1116 + | DnaN gyrB 1130 - 3556 + | GyrB TERM 3 3719 - 3769 + T 100 -14.8 -3.36273 | opp_overlap 3719, overlap 3757 ATTTAAGGGATTTAA TGGCCCGGGCTGCTGCTTTT TTCTGTTGTTT AAAGGTGGCTGCCCGGGCCA TTGCTGTTCGGGCGG HRM2_00030 4982 - 3702 - | TPR repeat protein tonB 5532 - 4990 - | TonB exbD 6098 - 5673 - | ExbD tolQ2 6692 - 6114 - | TolQ2 TERM 4 6491 - 6480 - G 73 -5.8 -4.56597 | overlap 6482 CCGGTTGTTCAAAAA CTGG GTCA CCAG AAGGGAGACCGCTCC tolQ3 8167 - 6731 - | TolQ3 TERM 5 7131 - 7145 + g 80 -4.9 -5.09225 | opp_overlap 7114, overlap 7132 ATGCCCGCGGAAAGT GCCCT GGCAA GGGGC TTTTTTCCATGGCGT TERM 6 7918 - 7928 + g 100 -2.4 -6.20267 | GAATGTTTTTTTGAT CCAG GGC CAGG TTTTTTTGTTTTTGC HRM2_00080 8952 - 8179 - | hypothetical protein TERM 7 9926 - 9871 - g 78 -9.9 -3.86346 | gap 3, opp_overlap 9891 9892 GTATGTGTTGATAAA GGGGGTCAACG-ATT-CCCAAGAGGCTG CCG CAGCC-CTTGTGCAATACCTTGTCCCCC TTAAGGTAAGGGTAA HRM2_00090 9089 - 10117 + | hypothetical protein HRM2_00100 11490 - 10276 - | putative aminotransferase HRM2_00110 13306 - 11597 - | hypothetical protein TERM 8 11919 - 11941 + g 70 -9 -3.5218 | opp_overlap 11918 11917 11921, overlap 11928 AGCAGGGAGACAAGG GAGACCTGCC AGC GGCCGGCCTC TGTTTGATCTGCTAT TERM 9 13076 - 13055 - G 81 -5.9 -5.02074 | gap 1, opp_overlap 13037 13033, overlap 13073 GTATTTGGCAAAAAA CGGCTTGCTT TTA AAAC-AGCCG CTCCAGTTGTAAACG TERM 10 13757 - 13769 + G 73 -3.3 -5.00884 | opp_overlap 13757 TGCCGATTCAAAGAT CACCC AAC GGGTA TTTTTTCCGGCGACT TERM 11 13932 - 13942 + G 73 -5.4 -4.72846 | GTTTAACCGTCCGTT TCAG CCC CTGA TTTTTGACTGTATGG HRM2_00120 13411 - 17589 + | SWI/SNF helicase family protein TERM 12 17983 - 17963 - f 76 -7.6 -4.18401 | gap 1 TGATATACCGGAAAA GGC-GATGC CAAC GCATCCGCC ATTGACCAGTTACTT xerD1 18016 - 18777 + | XerD1 hmrR1 18759 - 18929 + | HmrR1 TERM 13 19607 - 19591 - g 70 -4.3 -4.62069 | overlap 19592 TGTTCATTGCAAAAA CGTCGGC AAC GGCGACA AGGCCATCATCTATC TERM 14 19747 - 19731 - g 81 -5.7 -5.06052 | overlap 19732 CTAAAAAATACAAAA CCCGGAC CGT GACCGGA GAAAAATTTCTTTAT HRM2_00150 18926 - 19990 + | transposase for insertion sequence 801 (transposase 32 family protein) TERM 15 20316 - 20331 + F 100 -9 -5.28942 | TTATTCGTTATATCG CCTCCA TAAA TGGAGG TTTTTCTTTGGAGTA TERM 16 23858 - 23842 - g 74 -3.7 -5.02231 | overlap 23835 GAAAAATATCAAAAA TTGAACG GAG CGTTAAA AAATAAATGGCAGGG TERM 17 24519 - 24492 - g 70 -3.4 -4.82901 | gap 1, overlap 24494 GGCCCTTCACAAAAA GATGATCGACAGC ACA GCCGCC-ATCAAC CAGAACCCTGCAGCC TERM 18 24558 - 24576 + G 76 -3 -5.1675 | opp_overlap 24558 TTTGAAATACAAAGC TCCACCTG CCA CCGGTCGA TTTTTTGATAAATCC TERM 19 25353 - 25342 - g 74 -2.2 -5.20216 | GATATTATTAAAAAA TCCA CAGG CGGA AAAGGGATCATGCAG HRM2_00160 20494 - 25413 + | hypothetical protein HRM2_00170 25525 - 25650 + | putative 2-component response regulator TERM 20 26108 - 26122 + GF 77 -8.6 -3.91084 | overlap 26098 ACTTGCCCTGTTCGG CAATGG GGT CCATTG TTTGATTGCAGATCC TERM 21 26176 - 26165 - gf 70 -7.2 -3.75332 | ACGTGCCAAGGCAAA CGGG GTGA CCCG GGCTTTTGCCGCCAT cbiC 25848 - 26462 + | CbiC cbiA1 26410 - 27870 + | CbiA1 TERM 22 28484 - 28497 + G 72 -8.1 -3.81488 | CGTGGCCGAGGCCAT GGGTG TTGA CACCC TTGTGTTTACCACGG TERM 23 28648 - 28638 - g 91 -5.4 -5.37593 | opp_overlap 28638, overlap 28642 TCTGAAATTAAAAAA GTGA TCA TCAC GGTTTTTTTTGGAAA cbiD 27867 - 28973 + | CbiD TERM 24 29507 - 29487 - g 78 -3.9 -5.14563 | overlap 29498 GCCCTTAGGAAAAAA CTGCCCC CAAAGCT GTGGCAG CGTGTAAATGCCATT TERM 25 29619 - 29607 - g 76 -4.7 -5.00884 | overlap 29608 ATGTGTCCCAAAAAA GGGGC AAA GCCCA GAAAAAACATGGCAA nthA 28977 - 29642 + | NthA TERM 26 29641 - 29627 - f 75 -2.1 -5.28826 | gap 1 AAAGCCCAGAAAAAA CATGGC AAAG GCC-TG ATGTCAACGGCAGGT HRM2_00220 29861 - 30604 + | putative secretion activating protein TERM 27 31445 - 31459 + G 82 -3.5 -5.36364 | CCGTGATGGCATGGA CACTG ATTAC CGGTG TTTTTATGTTTTTGA norM 30841 - 32226 + | NorM HRM2_00240 32496 - 32663 + | hypothetical protein TERM 28 32757 - 32714 - T 100 -17.7 -4.10566 | gap 1, opp_overlap 32720 32721, overlap 32721 ATTTAAGAATAATAA CTGAGAAC-TGGGCCAGGTA TCTTG TACCTGGCCCAGGTTTTCAG CATCATGAAGAACAT TERM 29 32720 - 32750 + T 100 -16.2 -4.12188 | opp_overlap 32714 32721, overlap 32721 GAATAATAACTGAGA ACTGGGCCAGGTAT CTT GTACCTGGCCCAGG TTTTCAGCATCATGA TERM 30 32721 - 32749 + T 100 -19.7 -3.06991 | opp_overlap 32714 32721, overlap 32720 AATAATAACTGAGAA CTGGGCCAGGTAT CTT GTACCTGGCCCAG GTTTTCAGCATCATG TERM 31 32749 - 32721 - T 100 -19 -3.49425 | opp_overlap 32721 32720, overlap 32714 AATAATAACTGAGAA CTGGGCCAGGTA TCTTG TACCTGGCCCAG GTTTTCAGCATCATG HRM2_00250 33153 - 32827 - | hypothetical protein malT 36630 - 33322 - | MalT TERM 32 33360 - 33381 + g 72 -9.5 -3.36823 | gap 1 ATAGATCAAAGGTTT CTGGAT-CGG GTT CCGTATCCAG TTCAGTTTTCAGAAC TERM 33 33729 - 33749 + g 73 -11.9 -2.57423 | overlap 33723 CGAATTCCAGGCCCG TGGCCTTTG CCC CAAGGGCCA TAAATTCATCCGTGT TERM 34 34567 - 34584 + g 73 -2.7 -5.00616 | gap 1, overlap 34556 34571 CTCGCCTAGGGCTTT GACAGCCT TGA GGGCT-TC TTTTTTGGAAAGCGC TERM 35 34571 - 34581 + g 70 -4.6 -4.61482 | overlap 34556 34567 CCTAGGGCTTTGACA GCCT TGA GGGC TTCTTTTTTGGAAAG TERM 36 35301 - 35329 + g 78 -2.4 -5.24129 | gap 1, opp_overlap 35299 35300 35303, overlap 35309 35310 CTGTTTTTGTAAACC CAGCCAGTGCC CGGCCAAA GGC-CTGGATG TTTTTTCTGCCCCCC HRM2_00270 37334 - 36627 - | predicted anti-anti-sigma factor (response regulator family protein) HRM2_00280 39211 - 37331 - | sensory box histidine kinase/response regulator TERM 37 37889 - 37907 + g 70 -10.2 -2.97408 | overlap 37888 GCCCACAATTTCCGA TGCCCGGG TGA CCTGGGCG CTTATTTCCGTCAGC TERM 38 38131 - 38169 + g 74 -11.1 -3.03124 | gap 1, opp_overlap 38136, overlap 38137 TGGTTGCAACGATGA TCACATCCCTGCCAGGGT ATTC AGCCTGGCAGGCATG-GA TATTGACAAATACGG TERM 39 38182 - 38192 + g 100 -8.2 -5.75342 | opp_overlap 38180 38182, overlap 38191 GGATATTGACAAATA CGGC GTC GCCG TTTTTTTTAAAAAAC TERM 40 38845 - 38856 + g 86 -5.8 -5.09225 | GAACGATGCTTTCAA CCGA ATGA TCGG TTTTTTCCATGCCGT HRM2_00290 40386 - 39208 - | predicted leucine/isoleucine/valine-binding protein LS-BP precursor LivK HRM2_00300 40872 - 41015 + | hypothetical protein TERM 41 41024 - 41054 + T 78 -6 -4.81249 | opp_overlap 41028, overlap 41026 41027 CGGATGATGGGCATT AAAAGCAGGGCCTC TCT GAGGCTCTGCCATC TTTTTAAATTTAAAA TERM 42 41026 - 41052 + T 77 -8.6 -4.02139 | opp_overlap 41028, overlap 41024 41027 GATGATGGGCATTAA AAGCAGGGCCTC TCT GAGGCTCTGCCA TCTTTTTAAATTTAA TERM 43 41027 - 41051 + T 86 -12.1 -3.00199 | opp_overlap 41028, overlap 41026 41024 ATGATGGGCATTAAA AGCAGGGCCTC TCT GAGGCTCTGCC ATCTTTTTAAATTTA TERM 44 41050 - 41028 - T 100 -13.4 -4.26076 | opp_overlap 41027 41026 41024 TGATGGGCATTAAAA GCAGGGCCTC TCT GAGGCTCTGC CATCTTTTTAAATTT TERM 45 41147 - 41175 + T 100 -11.1 -4.60746 | overlap 41167 TTAAGATTTTTTCAG GGGTTTGCCAG GTCTGTA TTGGCAAACCC TTTTCCTGTTTTTAA HRM2_00310 41901 - 41143 - | hypothetical protein TERM 46 41824 - 41844 + g 70 -8.3 -3.72695 | GCCAAGTCTGGTTTT TACCCGG CCGGGTT CCGGGTA TTTGATAAAAACGAT HRM2_00320 42611 - 41901 - | glycosyl transferase, group 2 family protein HRM2_00330 43384 - 42602 - | putative ABC-type transporter permease protein HRM2_00340 44244 - 43381 - | putative ABC-type transporter permease protein TERM 47 43913 - 43902 - G 70 -3 -4.83169 | ACCGGCTGAGAAAAA TCAT GGTG ATGA AGGCCACGGCAATGT HRM2_00350 45453 - 44248 - | uncharacterized ABC-type transport system, periplasmic component TERM 48 44383 - 44403 + gr 73 -5.4 -4.70659 | gap 1 AAGCTTGTCAAAATT CTGCCGTGC CTCT GT-CGGCAG TTTTTCCATGTCAAG TERM 49 45109 - 45121 + gr 71 -4.8 -4.6902 | GCCGTAGAGAAGATC TGCC TGCCT GGCA TTTTTGAAATTCTCA HRM2_00360 46435 - 45365 - | uncharacterized ABC transporter, ATP-binding protein TERM 50 45433 - 45443 + g 95 -5.4 -5.5943 | GAGAATCATCCCCAG CAGT AAA ACTG TTTTTTTCATGGTTT TERM 51 45603 - 45589 - GR 95 -5.7 -5.40072 | opp_overlap 45600, overlap 45593 TTGTTCCTAAAAAAA CGATC TGGAC GATCG TCCAATGGCCCTGGC TERM 52 46221 - 46206 - GR 73 -3.2 -4.95302 | opp_overlap 46216, overlap 46216 GGAAAGAGAAGAAAA TCCTGG AATA CCATGA CCGCAGGGTTTTTAT TERM 53 46216 - 46229 + gr 70 -2.3 -5.01497 | opp_overlap 46206 46216 GAAAATCCTGGAATA CCATG ACCG CAGGG TTTTTATCTCCTGGT HRM2_00370 47376 - 46420 - | conserved hypothetical protein (putative phosphotransferase) TERM 54 48217 - 48245 + G 79 -6.5 -4.62069 | opp_overlap 48214 48210 GCCCAAAACCAATTG CCGGGAATGCCGG GAA CCGACCTGCCTGG TTTTTGCCCTGCGGC HRM2_00380 47837 - 48361 + | predicted Fe-S cluster protein HRM2_00390 50192 - 48516 - | hypothetical protein rlgA1 50450 - 51025 + | RlgA1 HRM2_00410 51102 - 51323 + | putative non-secretory transmembrane protein HRM2_00420 51394 - 52029 + | hypothetical protein silP 52044 - 54533 + | SilP TERM 55 54555 - 54527 - T 100 -11.9 -4.64861 | opp_overlap 54530 GTTGCGCAAAACAAA GATTTGAAGCGTT TTC AATGCTTCAAATC CGGATGCCTTGCAGA TERM 56 54779 - 54791 + T 79 -7.7 -4.39889 | TCGGTCTGCCAGAGG GCTGA AGC TCAGC TTTTCCTGTGGTTGT HRM2_00440 55518 - 55012 - | hypothetical protein TERM 57 55519 - 55529 + r 100 -6.8 -6.02345 | TAAAATCTGTTTCAT GGAG CAA CTCC TTTTTTTTATGATTC rndA 59027 - 55536 - | RndA TERM 58 58779 - 58755 - G 71 -7.2 -4.10179 | overlap 58745 GATAAGGTATACAAA GGAATACCCA AAAAA TGAGTATCCC CGGACAACCTTGGCA rndB 60560 - 59040 - | RndB TERM 59 59713 - 59699 - G 74 -10 -3.63515 | TCTTATGGGTAATAA CTCCCT GGA AGGGAG ATCGCATGATCAGGG TERM 60 59918 - 59928 + g 76 -4.6 -5.00616 | overlap 59916 AGTATATTTCATAGA GGGG ATC TCCC TTTTTTACAAAAAAA HRM2_00470 62142 - 60586 - | putative metal ion efflux outer membrane family protein (TolC-like) TERM 61 61674 - 61709 + g 74 -2.4 -5.09685 | overlap 61670 61675 TTAGATTATCATCCA GGGCCAGGATCTGGTC AAAC GACTGCATCTCGGCCG TTATTTTTTTTTGGG HRM2_00480 63482 - 62139 - | putative metal ion efflux outer membrane family protein TERM 62 63049 - 63029 - G 74 -8.3 -4.03234 | overlap 63032 CTTTCTGGATATAAA CCAGCTCAT AAA ATGAGCTTG AAACTGCAGTTACGA TERM 63 63971 - 63942 - H 70 -2.9 -4.91873 | overlap 63944 CAGATCAATCAAAAA CTGGTTAACTTCT ACAC AAAAGTTAACATG TCCAATAACCCCAAG TERM 64 64169 - 64221 + H 72 -9.2 -3.11999 | opp_overlap 64184, overlap 64173 64184 CAGAAGCCAGGGCTC AACTTCCCTGTAGAAGATCTTCTG TTTTT TAGAAGATCTTCTACGGGGCTGAA TTCCCTCCCTTTGAT TERM 65 64173 - 64217 + H 100 -17.4 -2.55392 | opp_overlap 64184, overlap 64169 64184 AGCCAGGGCTCAACT TCCCTGTAGAAGATCTTCTG TTTTT TAGAAGATCTTCTACGGGGC TGAATTCCCTCCCTT TERM 66 65558 - 65544 - g 71 -5 -4.57341 | AACTCGTTTGAAAAA TTCATC CTG GACGAA GAGATGATCTCAAGG mttB1 64449 - 65876 + | MttB1 HRM2_00500 65927 - 67489 + | putative choline/carnitine/betaine transporter (BCCT family protein) mttC 67888 - 68520 + | MttC TERM 67 68653 - 68641 - g 70 -3.3 -4.88736 | overlap 68649 GATGATGTACAAAAA CAGCA GAA TGCAG GTGCCACCTACATCG TERM 68 69193 - 69164 - g 70 -4.3 -4.65895 | TGCCCCAGCGAAAAA TCATCAACAGGAC CTTT GTGACGTTGATGA TGGATGCCGGCATGG metH1 68539 - 69339 + | MetH1 HRM2_00530 69722 - 69889 + | hypothetical protein TERM 69 69949 - 69937 - T 100 -7.7 -5.81032 | overlap 69938 CAACCGTAAAAAAAA GGATG GAC CATCC ATCAATACCGGACTG TERM 70 69952 - 69938 - T 77 -8.6 -4.06993 | overlap 69937 AACCGTAAAAAAAAG GATGGA CCA TCCATC AATACCGGACTGCAA HRM2_00540 70856 - 69951 - | Phage integrase/recombinase family protein TERM 71 70850 - 70826 - G 76 -7.9 -4.36914 | gap 1 TTGCTTTCCACAAAA GCTCCTCCGG CGCCTC CCGGA-GAGC CTCCATGACGGAAAC TERM 72 70912 - 70933 + H 71 -2.3 -5.11063 | TTCAGTTTCTCAGAA TCAGAGCAT AATA GTGTTTTGA TTTTTCTTCCCTCCT TERM 73 70985 - 71018 + H 74 -10.6 -2.71924 | overlap 70984 AATACGACTCCCAGT TTTATTGCACATAA TGCCTT TTATGTGCAATAAG CTTTAAACGGCGCTA TERM 74 71833 - 71846 + H 71 -2.4 -5.24129 | AGAATTTTTTGTGCC TTGC ATATGG GCAA TTTTTTATCCAAACG TERM 75 72502 - 72518 + G 100 -7.9 -5.26875 | TCTGTTCTGCATTTA CCGGCGG CAA TCGTCGG TTTTTTGCTTGGAGA HRM2_00550 71908 - 72639 + | conserved hypothetical protein (permease-like) TERM 76 73125 - 73106 - g 71 -7.2 -4.08144 | CCGACTAATCACAAA TCTCTCTC GCTC AAGAGAGA CAATTGGGTAAAATG HRM2_00560 72677 - 73585 + | hypothetical protein HRM2_00570 74258 - 73842 - | hypothetical protein HRM2_00580 75246 - 74326 - | hypothetical protein TERM 77 74654 - 74665 + g 87 -4.4 -5.48825 | ACTTCATTTCTGGAT TCAG CGAA CTGA TTTTTTTCGGTCATG HRM2_00590 75991 - 75227 - | putative ABC-type transporter, ATP-binding protein TERM 78 75622 - 75597 - G 71 -6.1 -4.36914 | gap 1 GGCTTGTCCAGAAAA TCCAGGGAGCAG ACC CCGA-CCCTGGA TAGAATCTCAACGAG TERM 79 76026 - 76054 + H 100 -11.9 -4.09685 | opp_overlap 76025 76024 TTGATACCTAAAATT CGATGATCAAG TTTTGGC CTTGATCATCG TTTTGGCCAATAGAA TERM 80 76609 - 76628 + G 100 -3.6 -6.02345 | opp_overlap 76609 CGATTTTGGACAGCA GCTTCT CTACATGC AGAAGC TTTTTTTTGTCATTG TERM 81 77412 - 77433 + G 90 -8 -5.00884 | gap 1 CCCTGATTCCCACCA GCC-TGGCC CTGAT GGCCATGGC TTTTTTACCCGGCGT HRM2_00600 76454 - 77764 + | predicted xanthine/uracil permease family protein ytfE 78582 - 77845 - | YtfE TERM 82 77917 - 77931 + g 86 -5 -5.28176 | overlap 77887 TCTATGCAGGTCTTC CTCGAA CTC TTTGAG TTTTTTGTAGGTAAG HRM2_00620 79773 - 78634 - | predicted C4-dicarboxylate transporter/malic acid transport protein TERM 83 78764 - 78746 - GR 71 -4.6 -4.74013 | GCTAAATATATAAAA TAACGG GGGATTA CCGTTA AAAATTTGAGATCAA TERM 84 79487 - 79457 - GR 86 -3.3 -5.54192 | gap 1, opp_overlap 79474 79475, overlap 79467 ACCAATGTAAAAAAA CCGACACCAACCAA ATGG TTGGCCAG-ATCGG CCAGGATTTTTTTTG narI 80398 - 79712 - | NarI narJ 80994 - 80428 - | NarJ TERM 85 80585 - 80567 - G 74 -6.7 -4.28548 | overlap 80568 ATGTATTGATCAAAA CCCTGGA GGCAT TCCAGGA TTAAGGCTTCATTTT narH 82438 - 81017 - | NarH narG 86126 - 82428 - | NarG TERM 86 83336 - 83347 + g 83 -3 -5.49729 | TACCCTCCTTATCGA TTGT TCCC ACAA TTTTTTTCAATGATT TERM 87 83958 - 83976 + g 70 -8.8 -3.53012 | ATATTCATGACCTTT TCCGCTGG CTC CCAGCAGA TTTGCCCGCCAGAGG TERM 88 84507 - 84535 + g 100 -9.5 -5.06103 | GTGGTTGGTACCGGC CCCGAGGAGAATC ATG GATTTCCCCCGGG TTTTTTCAGCATTGT TERM 89 84833 - 84812 - G 70 -4.5 -4.74103 | CGTGTAATTCAAAAA TGGGAAA CGAGACTT TTTCCCA GACATCTGCCTCCGA TERM 90 85813 - 85832 + g 73 -10.6 -3.33483 | opp_overlap 85806 85807 85825, overlap 85825 CACGAATAGGTGGCT CCCCGGGG ACAA CCACGGGG TTCGTGGTTTGGATA TERM 91 85871 - 85902 + g 70 -4.4 -4.62069 | overlap 85863 85873 CGCAATCCGGATAAT CTGTATTCTGGGTT TCCC AAACCAGGATGCCG TTTTTAACATAAACA TERM 92 86552 - 86536 - H 73 -3.6 -5.02074 | overlap 86521 CCATTTTTCAAAAAA CGGGTT GACAA ATCCCG CACAAGGTCTAAATT HRM2_00670 86604 - 87212 + | HTH-type transcriptional regulator (TetR-family protein) hlyD 87209 - 88360 + | HlyD HRM2_00690 88357 - 89547 + | ABC-type transporter, predicted premease protein HRM2_00700 89549 - 90259 + | ABC-type transporter, predicted ATP-binding protein TERM 93 91444 - 91432 - g 71 -7.7 -4.07568 | opp_overlap 91436, overlap 91434 91436 CCTGCCCGCTGAAAA GAGAG CGG CTCTC TCCGCCTTTGATGCG HRM2_00710 90305 - 91765 + | proton-shuffling outer membrane efflux protein (OprM-like) HRM2_00720 93317 - 91896 - | putative serine/threonine-specific protein kinase TERM 94 92674 - 92692 + g 73 -5.2 -4.65895 | overlap 92667 92676 92691 AGGTAGTTGCCGATG GTCCGATA GGA TGTCGGCC TTTTTGAATCAAAGC HRM2_00730 93913 - 93347 - | putative fusion protein with hemerythrin HHE cation binding domain HRM2_00740 95903 - 94386 - | putative 5,10-methylene-tetrahydrofolate reductase MetF TERM 95 94797 - 94807 + g 79 -6.8 -4.63218 | opp_overlap 94790, overlap 94790 TCGATAAACCGGTGC CAGC CCG GCTG TTTTGTTAAAAAAAA TERM 96 95707 - 95735 + g 73 -12.4 -2.66711 | opp_overlap 95707 95718, overlap 95706 TCATATCCCAGCACA TCCGGGGACAAC GAGGG GTTGCCCCCGGG GTTGTCGGTTATGGA TERM 97 95735 - 95707 - G 74 -12.4 -2.80443 | opp_overlap 95706 95707, overlap 95718 TCATATCCCAGCACA TCCGGGGACAAC GAGGG GTTGCCCCCGGG GTTGTCGGTTATGGA HRM2_00750 95925 - 96158 + | hypothetical protein TERM 98 97611 - 97594 - g 71 -7 -4.17048 | TTTTTCGTAAAATAA GCGGAT TGCTTG ATCCGC GAGTGGGACGTGGCG HRM2_00760 96813 - 97901 + | hypothetical protein HRM2_00770 98094 - 100235 + | conserved hypothetical protein with SAM binding motif TERM 99 100858 - 100875 + G 70 -8.4 -3.74345 | opp_overlap 100858 GTTACAGGGTGAATA CCACCG CAACGA CGGTGG TTTGCCTGTCTGCAT TERM 100 100985 - 100997 + G 95 -5.5 -5.65496 | CTGTGTGGCTGTGAC CAGTG CGC CGCTG TTTTTATTTTTAATG TERM 101 101077 - 101106 + G 100 -8.5 -5.95539 | AAGTCAATAATGCCC TGGCAGCGATTCC AAGC GGGTTCGCTACCA TTTTTTTATTTGGGA HRM2_00780 100521 - 102680 + | signal transduction family protein (GGDEF domain protein) fhlA 104287 - 102809 - | FhlA TERM 102 102905 - 102920 + g 71 -7.6 -4.11394 | opp_overlap 102919, overlap 102919 ATATACCTTCCCCCC GGTTCT GGTC AGAACC TTTTGCAAATAGGCT TERM 103 103614 - 103595 - G 75 -9.2 -3.87815 | GTTCACCGGGATAAA CGGACCGC CCTT GCGGTCAG AGAGCCTGTGAACGG TERM 104 104543 - 104532 - g 74 -4.4 -4.84274 | CAAGGAGATTAAAAA TGGA AAAA TCCA ACACCATGCCCATGC HRM2_00800 104531 - 105178 + | putative peroxiredoxin TERM 105 105205 - 105235 + F 100 -19.8 -5.04987 | TTCTGGTATACCCCG GGCGGGGCCGAAGA TAG TCTTTGGTCCCGCC TTTTTTGGCAATCTT TERM 106 105339 - 105327 - f 100 -10.5 -4.43477 | GTGATTGAAGTAAAA CCGGC ACA GCCGG AGTGGGGTATGGCTC TERM 107 105666 - 105632 - f 70 -7.4 -3.84246 | overlap 105637 CTTTTAAGCATGAAA TTAAATTTTGTAGCCC ATT GAAATACAAAATTTAA ATAACGAGCATCTAT hdrD1 105784 - 107103 + | HdrD1 TERM 108 107228 - 107207 - T 93 -10.1 -4.37971 | AAAATATGATTAAAA GGGCAATCC AAAT GGTTTGCCC TTGCAAAAAAAGAAA HRM2_00820 109101 - 107440 - | hydroxylamine reductase (6Fe-6S prismane cluster-containing protein) TERM 109 108767 - 108781 + g 73 -2.8 -5.01858 | GCTTCCGGCAGTGCA TCATGA AAA TCCTGA TTGTTTTTTTCTTTG HRM2_00830 110319 - 109141 - | metallo-beta-lactamase family protein (IMP dehydrogenase/GMP reductase:Beta-lactamase-like) HRM2_00840 110502 - 110356 - | hypothetical protein HRM2_00850 110480 - 110743 + | hypothetical protein nnrR 111649 - 110951 - | NnrR TERM 110 111858 - 111881 + r 100 -12.4 -4.33956 | opp_overlap 111858 CATGAAAGTCAGAAA TCCCGCCCAC AAAA GTGGACGGGA TTTGTCTGTTTTCAA TERM 111 111881 - 111858 - R 100 -14.6 -4.03204 | opp_overlap 111858 CATGAAAGTCAGAAA TCCCGCCCAC AAAA GTGGACGGGA TTTGTCTGTTTTCAA HRM2_00870 113301 - 111904 - | hydroxylamine oxidoreductase (HAO) TERM 112 113340 - 113350 + r 70 -5.4 -4.4891 | GATTATATCAATTTT CCTT TAA AAGG TTTTATACTGATAAA napC 113867 - 113343 - | NapC TERM 113 113617 - 113635 + g 74 -3.8 -5.0538 | CCATGGTAGGTTTTG CCATAGAG AAA CTTGATGG TTTTTTCAGGTGGCG TERM 114 115229 - 115259 + G 82 -11.9 -3.62518 | gap 1, overlap 115230 115230 115254 CTTCCAGGGGGAGCA TGCC-GGGCAATGG CTTT CCATTGCCCAGGCC TTTGCCGGTATTTCC TERM 115 115230 - 115258 + G 84 -15.4 -2.77029 | gap 1, overlap 115230 115229 115254 TTCCAGGGGGAGCAT GCC-GGGCAATGG CTTT CCATTGCCCAGGC CTTTGCCGGTATTTC HRM2_00890 114516 - 115331 + | hypothetical protein HRM2_00900 118497 - 115339 - | putative H+-transporting two-sector ATPase, gamma subunit (AcrC-family protein) TERM 116 116933 - 116921 - G 86 -9.1 -4.56358 | opp_overlap 116919 116924 116926 CACAGGTATAGAAAA GGGTC GTA GACCC GGTTGATAAACCGGG TERM 117 117951 - 117979 + g 74 -7.3 -4.13767 | CATAGTCCCGGATTC CGGCCAGGTCGAC CTG GGTGATCTGGGCG TTTTGCAGTAACCGG HRM2_00910 119792 - 118494 - | putative H+-transporting two-sector ATPase, beta subunit (ArcA-family protein) TERM 118 118541 - 118558 + g 74 -8.4 -4.08216 | overlap 118509 118507 118505 TTGTTGCCGTCTGGC CGGTGG TGTTGT CCACCG TTTTCAAGGGCATCC TERM 119 118988 - 119003 + g 73 -9 -3.73042 | opp_overlap 118968 118967, overlap 118987 CCAGGGATCCCTGGT CCCCAT GGGT ATGGGG TATTTTGATCCAGCG TERM 120 119244 - 119258 + g 79 -7 -4.60041 | ATCCAGCTGGGGACG GCGCAG CAT CAGCGC TTTTTCCACATCGCT TERM 121 119436 - 119408 - G 74 -11.1 -3.14211 | AGTCTGTGGGATCAA TTTTCAGCAGGGT CTC ACCCTGACGAAAA TGGCCACCAGGTACC TERM 122 119715 - 119727 + g 71 -6.2 -4.41047 | overlap 119714 TATGGTACTCCAGGG CCGC GGATG GCGG TTTTCATTCACAGAT HRM2_00920 121289 - 119838 - | putative outer membrane efflux protein (OprM-family protein) TERM 123 120555 - 120569 + g 73 -5.6 -4.60889 | opp_overlap 120546 120563, overlap 120557 120566 TAAAACTCCGGTCTC GGCCAG AAC CTGGGC TTTTTCGCCCTGGTT HRM2_00930 123072 - 121312 - | FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein) TERM 124 122004 - 122019 + g 70 -4.6 -4.62069 | overlap 122003 122003 TTCCCATCATTCCCG GAGGTG CTCC CCCCTC TTTTTGGGGTCCACC TERM 125 122484 - 122506 + g 71 -5.5 -4.45544 | gap 1, opp_overlap 122475 CATCAATGCTGAAGC CGGCAGC-TC CGGC GATGCGGCCG TTTTCCTTGATCAGA HRM2_00940 123714 - 123073 - | conserved hypothetical protein (non-secretory protein with 6 TMhelices) fdx1 123933 - 123718 - | Fdx1 TERM 126 124232 - 124201 - H 100 -5.2 -6.30182 | gap 1, overlap 124202 TCATATAAAAAAAAA TCCTGGGGCTTGT ATGTGCG ACAA-CCCCAGGC GTAAACCAAACAGGA TERM 127 124231 - 124202 - H 86 -8.7 -4.35669 | gap 1, overlap 124201 CATATAAAAAAAAAT CCTGGGGCTTGT ATGTGCG ACAA-CCCCAGG CGTAAACCAAACAGG ubiE1 124282 - 124866 + | UbiE1 prsA1 125980 - 125039 - | PrsA1 TERM 128 125661 - 125677 + g 80 -2.9 -5.36441 | overlap 125651 AGTCGTCCGGCAATG GATATCC TGG GGGAATC TTTTTTGTCTGACCG TERM 129 125877 - 125860 - G 78 -4.1 -5.10208 | GAACCTGAACAAAAA GGTTGTC GTTT GAAAACC GGGATATCTTTATCG HRM2_00980 126267 - 126034 - | putative RNA-binding protein (KH-type 1 domain protein) TERM 130 126136 - 126150 + g 74 -7.2 -4.17316 | opp_overlap 126138 GCCTTTTTTGCCAAT GATCTT GCC AAGATC TTCTTTTGCGACACT HRM2_00990 127711 - 126359 - | two domain fusion protein (N:methyltransferase, C:TPR-repeat family protein) TERM 131 127281 - 127293 + g 73 -9.1 -3.74077 | CTGGATATGGCCTCA TCGGG TTT CCCGA TTTCCCTGTATGCAA TERM 132 127863 - 127886 + H 95 -12.5 -3.24423 | GTATTTCTGCTGACC CGGTTCCCA ACGGGG TGGGAACCG TTGAATATTATTCCC HRM2_01000 128010 - 128972 + | ABC-type transporter, periplamsic substrate binding protein HRM2_01010 128987 - 129721 + | ABC-type transporter, ATP-binding protein (ATPase) HRM2_01020 129718 - 130464 + | ABC-type transporter, permease protein (nitrate/sulfonate/bicarbonate transporter) TERM 133 131114 - 131139 + F 100 -10.4 -6.20267 | opp_overlap 131114 AATGCCTTTTTAAAA CCTTGCAGCC ATTTGG GGCAGCAAGG TTTTTTTGTTTTTAG TERM 134 131139 - 131114 - f 91 -10.4 -4.08064 | opp_overlap 131114 AATGCCTTTTTAAAA CCTTGCAGCC ATTTGG GGCAGCAAGG TTTTTTTGTTTTTAG TERM 135 131478 - 131503 + F 100 -10.4 -6.09196 | opp_overlap 131478 AATGCCTTTTTAAAA CCTTGCGGCC ATTTGG GGCAGCAAGG TTTTTTTGTTTTCAG TERM 136 131503 - 131478 - f 91 -10.4 -4.08064 | opp_overlap 131478 AATGCCTTTTTAAAA CCTTGCGGCC ATTTGG GGCAGCAAGG TTTTTTTGTTTTCAG HRM2_01030 131584 - 133098 + | ABC-type transporter, periplasmic substrate binding protein TERM 137 133183 - 133159 - g 77 -9.3 -4.00038 | CAGCATGATCAGAAA GAGGGCCAT ACTGGTG ACGGCCCTC CTGGTGATCGTCATC HRM2_01040 133076 - 134152 + | ABC-type transporter, permease protein HRM2_01050 134152 - 134937 + | ABC-type transporter, ATP-binding protein TERM 138 135075 - 135061 - g 84 -2.1 -5.53991 | overlap 135043 GATTTATTAAAAAAA TAACC CTGCC GGTCA TTCTACTACTCTCAA HRM2_01060 135036 - 136283 + | putative porin D precursor (outer membrane protein D2) (imipenem/basic amino acid-specific outer membrane pore) HRM2_01070 136416 - 136643 + | putative ABC-type transporter, permease component TERM 139 136712 - 136697 - T 70 -7.5 -3.74872 | ATTGAGGCGATCAAA GGGGG ACGAAA CCCCC AGGTGAATTTGTCTA HRM2_01080 137093 - 136725 - | hypothetical protein TERM 140 136891 - 136872 - G 74 -8.6 -3.97947 | opp_overlap 136875, overlap 136875 CGTACCTATGACAAA CAACCACC CGCC GGTGGTTA TGAGCGTGGAGGGCC TERM 141 136888 - 136875 - G 74 -8.1 -4.11585 | opp_overlap 136875, overlap 136872 ACCTATGACAAACAA CCACC CGCC GGTGG TTATGAGCGTGGAGG TERM 142 137294 - 137252 - R 76 -10.8 -2.68823 | overlap 137251 137256 CTGGGCTCATATAAT TCAACCTCCCCTTTTCATGA CCA TCATGAAAAAACAAGGCTGA TTAAAATGTCCAGAC HRM2_01090 137560 - 137252 - | hypothetical protein HRM2_01100 137767 - 137931 + | putative acetyl-CoA:acetoacetyl-CoA transferase HRM2_01110 138210 - 138389 + | hypothetical protein HRM2_01120 138594 - 138869 + | hypothetical protein TERM 143 139025 - 139038 + F 71 -3.1 -5.00616 | gap 1 TGCTCAGGCCAAGAG CCGTGA TCG TC-CGG TTTTTTCCCGGAAAA TERM 144 139243 - 139263 + G 71 -6.7 -4.13767 | overlap 139238 139244 GTTTTTGCCGGTCAC CCCGGGGGG CAT TTCCCCGGA TTTTGGCCTGGCCCG TERM 145 139244 - 139262 + G 71 -10.2 -3.08046 | overlap 139238 139243 TTTTTGCCGGTCACC CCGGGGGG CAT TTCCCCGG ATTTTGGCCTGGCCC HRM2_01130 139153 - 139764 + | conserved hypothetical protein (SH3-like domain protein) TERM 146 139776 - 139791 + F 71 -4.7 -4.60889 | TTAAGATGAGATCCA CTGTC TTTCCT GACAG TTTTTCCCCATGCTT HRM2_01140 139936 - 140256 + | putative calcium-binding EF hand domain protein TERM 147 140260 - 140250 - f 79 -6.8 -4.66163 | ATCTGGACCGAAAAA GGGA TAA TCCC ACCATTATAGACAAG TERM 148 140564 - 140544 - g 80 -10.5 -3.73968 | opp_overlap 140544 140539 140546 AAAGCCGTTATCAAA TATCCGGCA GAT TGCCAGATA TGTCATTTGTGCAGG fdx2 140436 - 140651 + | Fdx2 TERM 149 140797 - 140815 + G 70 -3 -4.82901 | AACGATTCTGTCATT CTTCCAGA TGA TCGGGCAG TTTTTCTGGGCACGG HRM2_01160 140654 - 141295 + | putative FAD/NAD(P)-binding:oxidoreductase TERM 150 142372 - 142339 - g 95 -16.7 -2.87564 | CCATGGCCCCAGACA CGGAGGACCTCCTCC CGGT GGAGGTGGTCCCCCA AAGGGGGGTGGTCCT HRM2_01170 141296 - 143080 + | FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein) HRM2_01180 143535 - 143894 + | hypothetical protein TERM 151 144652 - 144626 - g 71 -10.2 -3.05343 | opp_overlap 144651 TGTACACTGCCAATA CCATGGCCTC GGCCATA GAAGCCATGG GGATGTCCCTGCCTT ilvD1 144013 - 145692 + | IlvD1 TERM 152 147037 - 147027 - g 79 -6.8 -4.70659 | CCCGATATTGAAAAA GCCT GCC AGGC CACCATCCTCCTGAA TERM 153 148055 - 148041 - g 76 -2.8 -5.14965 | overlap 148021 ACCTTTATCAAAAAA CTCC GGGCCAG GGAG GCAAAGACCTGGCAG HRM2_01200 146178 - 149018 + | putative D-lactate dehydrogenase (FAD / iron-sulfur cluster-binding domain protein) HRM2_01210 149235 - 149861 + | homoserine/threonine efflux protein (LysE-type family translocator) betL 151556 - 149973 - | BetL TERM 154 151457 - 151442 - G 70 -2.6 -4.99043 | overlap 151456 GGGTCACAAAGAAAA GAATTC GGTC AAATTC TCCCAGGGCCGGGGC HRM2_01230 151927 - 151628 - | putative methionine synthase I metH2 TERM 155 151815 - 151825 + g 89 -2.4 -5.71712 | ATGTAGCTAGCCCCG CAGG CCT CCAG TTTTTTTATATCGGC TERM 156 152005 - 151955 - R 74 -7.7 -4.07568 | gap 2, opp_overlap 151998, overlap 151959 TTTGCTTGCTTAAAA TCAATTCGGGGCA-GGCGGAT-CCA TCA TGGCATCCGCCCTATCCCGGATCAA GGTGATGTTCCGTTT TERM 157 152001 - 151959 - R 73 -8.5 -3.66908 | gap 2, opp_overlap 151998, overlap 151955 CTTGCTTAAAATCAA TTCGGGGCA-GGCGGAT-CCA TCA TGGCATCCGCCCTATCCCGGA TCAAGGTGATGTTCC betT 153767 - 152205 - | BetT mttB2 155245 - 153818 - | MttB2 TERM 158 154136 - 154150 + g 71 -5 -4.57341 | CCTTGAGATCATCTC TTCGTC CAG GATGAA TTTTTCAAACGAGTT TERM 159 155525 - 155473 - R 81 -9.2 -3.82499 | opp_overlap 155488, overlap 155464 155474 155477 155501 ATCAAAGGGAGGAAA TTCAGCCCCGTAGAAGATCTTCTA AAAAG CAGAAGATCTTCTACGGGAAAGTT GAGCCCTGGCTTCTG TERM 160 155524 - 155474 - R 89 -12.7 -2.88776 | opp_overlap 155488, overlap 155464 155473 155477 155501 TCAAAGGGAGGAAAT TCAGCCCCGTAGAAGATCTTCTA AAAAG CAGAAGATCTTCTACGGGAAAGT TGAGCCCTGGCTTCT TERM 161 155521 - 155477 - R 100 -17.4 -2.68546 | opp_overlap 155488, overlap 155464 155474 155473 155501 AAGGGAGGAAATTCA GCCCCGTAGAAGATCTTCTA AAAAG CAGAAGATCTTCTACGGGAA AGTTGAGCCCTGGCT HRM2_01260 156973 - 155594 - | sigma-54 dependent DNA-binding response regulator TERM 162 156350 - 156337 - G 70 -2.3 -4.93365 | TTTCATAACCAAAAA GTTCG CTTT CGATC AGTTCTCCGGGGATG HRM2_01270 159501 - 156970 - | signal transduction histidine kinase (ATPase) HRM2_01280 159778 - 159494 - | hypothetical protein HRM2_01290 160378 - 160142 - | transcriptional regulatory protein (DNA-binding response regulator) HRM2_01300 160667 - 161017 + | hypothetical protein HRM2_01320 161731 - 162150 + | subunit of type I site-specific restriction enzyme R HRM2_01330 162254 - 162523 + | subunit of type I site-specific restriction enzyme R HRM2_01340 162726 - 162926 + | putative metal-dependent hydrolase HRM2_01350 164731 - 163148 - | putative nucleoside-diphosphate-sugar epimerase TERM 163 163359 - 163349 - G 74 -4 -5.00616 | overlap 163350 TTTTGGCTTAAAAAA TGAT AGA ATCA TCAACTCTATCTCCT TERM 164 164145 - 164164 + g 74 -10 -3.62859 | opp_overlap 164143 CTTACAGCAATAGGC TGGGTCGG CATG CTGACCCA TTTGGGGGTTATCAT TERM 165 164268 - 164278 + g 91 -6.8 -5.18561 | CTGAGAATCGTAACC GGCA CAC TGCC TTTTTTCAGTATTTC TERM 166 164319 - 164330 + g 81 -5.8 -5.05601 | opp_overlap 164319, overlap 164327 TTTCTTGATATTAAA TGCC TGCT GGCA TTTTTGTCTGTAATG TERM 167 165043 - 165055 + H 100 -10.5 -4.53303 | GGCAGATCCCCCGCT CCGGC CGT GCCGG TTTTATATGAAACTC TERM 168 165480 - 165492 + H 80 -10.5 -3.50393 | AGCCGATACTTCGCT CCGGC CGT GCCGG TTATATGGAATAAAA furA 165575 - 166018 + | FurA TERM 169 167653 - 167633 - g 74 -4 -5.00616 | gap 1, overlap 167635 CCGTGCTTGAAAAAA TCGCAGCCG ATGG CGG-TGCAA GCGTGGCTGATGTCA catA 166096 - 168258 + | CatA ubiE2 169139 - 168498 - | UbiE2 speB 170039 - 169170 - | SpeB nspC 171267 - 170110 - | NspC TERM 170 171211 - 171180 - G 77 -9.5 -3.68351 | gap 1, overlap 171181 GGGCCAGGATCGAAA GGTTGTGG-CGCAG GCAGT CTGCGTCCACAACA AAGCCCGGGGTCGAC TERM 171 171210 - 171181 - G 77 -13 -2.80796 | gap 1, overlap 171180 GGCCAGGATCGAAAG GTTGTGG-CGCAG GCAGT CTGCGTCCACAAC AAAGCCCGGGGTCGA lysA1 172424 - 171246 - | LysA1 speA 174403 - 172484 - | SpeA TERM 172 173134 - 173148 + g 70 -4.2 -4.64657 | overlap 173135 173141 TTTCCACCAGGGAGC GTTCCC TCA GGGAAA TTTTTCCCAGTTTGA TERM 173 174047 - 174065 + g 74 -9.6 -3.59935 | overlap 174045 CTGGGTGCCGATATT GGTGATGG CCT CTATCACC TGTTTCTGCTGGTTG TERM 174 174433 - 174421 - H 79 -6.9 -4.58395 | TTCATCCCTTAAAAA GCGGC CCC ACCGC CAGTGAAAAAACAAT HRM2_01430 174700 - 174924 + | putative periplasmic protein HRM2_01440 174978 - 175799 + | hypothetical protein HRM2_01450 175927 - 176814 + | predicted Zn-dependent protease HtpX-like protein TERM 175 176846 - 176875 + F 73 -8.5 -3.65991 | opp_overlap 176848 CGCCAACTGGTTCAA CACCGGCAAAAGC TGCT GTACTTGCCGGTG TTATATTCAGCGCCT HRM2_01460 177151 - 177333 + | hypothetical protein TERM 176 177525 - 177496 - g 74 -4.3 -4.85129 | overlap 177497 ATCACATATGAAAAA CTGTTGGCTGT TTTCTGGG ACAGCCATCAA CCCTCCCGGCAGTCC TERM 177 177547 - 177565 + G 100 -3.1 -5.86061 | opp_overlap 177561 CGGCAGTCCTGGTCC CAGCAAT ATAAA AATGCTG TTTTTTTTCATAACG TERM 178 177587 - 177561 - g 74 -2.3 -5.1244 | opp_overlap 177547, overlap 177583 CCAGCAATATAAAAA TGCTGTTTTTT TTCAT AACGAACAGCA ACGCAGGCTGGCAAT msrA 177409 - 177906 + | MsrA TERM 179 178440 - 178453 + G 73 -3.1 -4.96501 | gap 1, opp_overlap 178435, overlap 178442 ACTTAAAGCACCGTT TCTGCC ACG GGC-GA TTTCTTTTTATACGG TERM 180 179078 - 179092 + G 74 -11.4 -3.07816 | ATCCGGACCGGCGTG GCGCCA CCA TGGCGC TTCAATCCCTGGCAG TERM 181 179165 - 179181 + G 79 -9.3 -4.2558 | TTCTGGATCTGACAG GGGGCGG TAA CAGCCCC TTTTCCTGGGGACTG HRM2_01480 178039 - 179274 + | predicted permease of the major facilitator superfamily (MFS) HRM2_01490 180148 - 179297 - | conserved hypothetical protein with transglutaminase-like domain TERM 182 180866 - 180850 - g 70 -2.1 -4.97402 | opp_overlap 180851, overlap 180841 180851 GAAAATCCAGAAAAA GCCCTGG TTT CCATGGG GTTATATGTGTTTTC glgC1 180274 - 181497 + | GlgC1 TERM 183 181473 - 181483 + T 74 -4 -5.00895 | AATTGTTGTCGTACC CAAA GAT TTTG TTTTTGTCTCCTGAA HRM2_01510 182895 - 181678 - | GTPase TERM 184 182637 - 182651 + g 78 -5.7 -4.80882 | overlap 182632 TAAGATCCGCCGTTT CCAGA CGTTC TCTGG TTTTTAGTATCCGCT HRM2_01520 184228 - 182900 - | fumarate lyase (DEAD box) bioB1 185271 - 184225 - | BioB1 TERM 185 185020 - 184997 - GR 76 -9.6 -3.53091 | opp_overlap 184990 184996 184995 AGCCCCCTGTCGAAA CCGGCTTGAA TCAC TTCAAGCAGG CGGTTTTCTTTAATC HRM2_01540 185986 - 185243 - | ABC-type transporter, ATP-binding protein (ATPase) HRM2_01550 186756 - 185980 - | ABC-type transporter, permease protein (membrane spanning protein) HRM2_01560 187742 - 186783 - | ABC-type transporter, substrate-binding protein HRM2_01570 189133 - 187787 - | sigma-54 dependent transcriptional regulator TERM 186 188848 - 188867 + g 74 -7.1 -4.4261 | CAAGAACCGTACCAT CAGGGGC AAACAC GCCTCTG TTTTCATATTCAACA TERM 187 189163 - 189180 + r 95 -3.4 -6.36459 | ACAGGCGCTTTGCAC TGAGCT TCCTGC GGCTCA TTTTTTTTTCTTCAA fdx3 189685 - 189146 - | Fdx3 hydA1 191072 - 189678 - | HydA1 fdhB1 191785 - 191168 - | FdhB1 TERM 188 191801 - 191836 + r 84 -11.1 -3.69216 | overlap 191799 191803 191804 GATAACTTAACTCCT TGTGTCCCTGGGCGG CAAAGT CCGCCCGGGGAAGTA TCTTTTCAATGGCAA TERM 189 191803 - 191834 + r 89 -11.5 -3.42605 | overlap 191801 191799 191804 TAACTTAACTCCTTG TGTCCCTGGGCGG CAAAGT CCGCCCGGGGAAG TATCTTTTCAATGGC fdhA1 193868 - 191778 - | FdhA1 TERM 190 191804 - 191833 + g 76 -12.8 -2.65081 | overlap 191803 191801 191799 AACTTAACTCCTTGT GTCCCTGGGCGG CAAAGT CCGCCCGGGGAA GTATCTTTTCAATGG TERM 191 192181 - 192193 + g 70 -9.1 -3.53224 | AGTATGAGCGGGTAT TGCCC ATC GGGCA TTTCAGCCGGCGGTC TERM 192 194036 - 194014 - H 100 -14.2 -4.19238 | opp_overlap 194006, overlap 194027 194030 CTTTTAATTTGAAAA GCATGCATGC AAA GCACGCATGC ATGCAAAATTTACAC TERM 193 194305 - 194280 - H 71 -9.9 -2.67047 | overlap 194279 194278 194282 194298 GGGAAAAAAATAAGT TATGGACGATT TACC AATCATCCATA GGAAGTAAGCTTTTT aroC1 194599 - 194835 + | AroC1 HRM2_01630 196159 - 194828 - | uncharacterized protein with HipA-like domain HRM2_01640 196533 - 196171 - | HTH-type transcriptional regulatory protein TERM 194 196740 - 196751 + H 70 -5.8 -4.34263 | overlap 196736 TTACCTGGGGTCATA CCTG GGGG CAGG TTTGTATTATTGCAC HRM2_01650 196761 - 196955 + | hypothetical protein HRM2_01660 198243 - 197149 - | hypothetical protein HRM2_01670 199658 - 198258 - | hypothetical protein HRM2_01680 200821 - 199748 - | putative molybdenum ABC-type transporter, ATP-binding protein HRM2_01690 201618 - 200821 - | putative molybdenum ABC-type transporter, permease subunit modA3 202349 - 201591 - | ModA3 TERM 195 203856 - 203841 - g 79 -6.8 -4.60648 | overlap 203853 AAAACAGGAAATAAA GGCCCT TATC AAGGCC GTGGACCAGCTCTCC TERM 196 205411 - 205401 - g 71 -5.4 -4.56153 | opp_overlap 205399 205401 GGATTACAAAAAGAA GTTC CGG GAAC TGTTTGACTCCTATT HRM2_01710 202780 - 205794 + | hypothetical protein arsC1 206270 - 205854 - | ArsC1 TERM 197 206952 - 206988 + G 70 -2.3 -4.91511 | opp_overlap 206950 CAGGTTTATGATACG GATATGGAGGC-GCTCC ATACG GGATCCGCC-CCTTATC TTTTTCTGATCACCT TERM 198 208089 - 208073 - g 78 -2.1 -5.24531 | overlap 208076 ATCCCGCAGAAAAAA GAACTGC GGC GCCGTGC TCATGCTTGATATGG HRM2_01730 206529 - 209306 + | signal transduction family protein (GGDEF domain protein) TERM 199 210412 - 210401 - g 76 -5.8 -4.67173 | opp_overlap 210400 GAACGCAAAAAACAA GACC GGCA GGTC ATCTCTAAATTGATC TERM 200 210769 - 210747 - g 71 -10.6 -3.05521 | ATGAGATTGTGAATA TTGTCCGGCA TAT TGCCGGAAAA ACCAAGCTGCTGGCA HRM2_01740 209408 - 211327 + | putative methyl-accepting chemotaxis citrate transducer (Citrate chemorecitrate transducer protein) TERM 201 212247 - 212259 + G 87 -4.8 -5.40474 | TGGCCGGAATTCCAA CCGT TGTTT ACGG TTTTTTTGCAGCGCT TERM 202 212362 - 212380 + G 83 -9.6 -4.21811 | AGCGGGTCTTGTCAT GGGTGTGA TGA TCATACCC TTTGTCTCTTCCCTG pstC1 211400 - 212788 + | PstC1 TERM 203 213369 - 213409 + G 80 -2.5 -5.44721 | GCAGGTGATTCAAGG GAGCCGGAGCTTGCC GGAATCTGGGG GGCAGCCTGCGGTTC TTTTTTTACCCTCCT TERM 204 213940 - 213952 + G 70 -10.5 -2.91276 | opp_overlap 213940, overlap 213939 TCCTGTGGGCAGACA GCCCG GAA CGGGC GTTTCTGGAGCGGAC TERM 205 213952 - 213940 - g 70 -10.5 -2.87132 | opp_overlap 213939 213940 TCCTGTGGGCAGACA GCCCG GAA CGGGC GTTTCTGGAGCGGAC pstA1 212781 - 214058 + | PstA1 pstS1 214099 - 214932 + | PstS1 HRM2_01780 215013 - 216731 + | transposase (IS4 family protein) pstS2 216767 - 217021 + | PstS2 pstB1 217142 - 218056 + | PstB1 phoU1 218070 - 218756 + | PhoU1 TERM 206 218781 - 218769 - f 86 -10.5 -3.74542 | overlap 218761 TAGAAGACCGAATAA CCGGC ACG GCCGG AGCGAGGGATGGCAT TERM 207 218859 - 218885 + F 86 -5.9 -5.38326 | gap 2, opp_overlap 218859 GGAGTTTCATATAAA CAGGAGCTGGGTG ATC CGCCC-G-TCCTG TTTTTGTTTGATTCA TERM 208 220514 - 220526 + G 75 -10.5 -3.34233 | opp_overlap 220509, overlap 220523 ATCATATCAACCCCC GGCCC GGT GGGCC TTCTCGGCCTTCTCA TERM 209 220560 - 220574 + G 82 -7.8 -4.73388 | opp_overlap 220554, overlap 220554 CAAAGCTAATGGGTG TCCCGG TTT CTGGGA TTTTTCATACCGATT HRM2_01820 218999 - 221446 + | putative glycosyl transferase, group 1 family protein HRM2_01840 222848 - 222231 - | signal transduction family protein (GGDEF domain protein) ptsA1 221484 - 222335 + | PtsA1 TERM 210 222887 - 222906 + Tr 91 -7.8 -4.89339 | ATCTTTTAAGAAGTT CCCGTCAT GCTG ATGCCGGG TTTTTGTAAATCGTT HRM2_01850 224522 - 222930 - | RecJ-like exonuclease (DnaJ-type Zn finger protein) HRM2_01860 225047 - 225736 + | hypothetical abortive infection protein HRM2_01870 227112 - 225961 - | uncharacterized conserved multi-transmembrane protein TERM 211 226679 - 226663 - G 95 -2.1 -6.14618 | overlap 226664 GATAAAAGAAAAAAA CGAACGG GCC CCGGTCC AGCCGCCGAAAAGGA TERM 212 227149 - 227137 - R 78 -10.5 -3.28712 | overlap 227138 CCCTTTTTTCTATAA CCGGC ATG GCCGG AGCATGGGATCTGCT TERM 213 227575 - 227525 - R 74 -6.4 -4.52589 | opp_overlap 227535, overlap 227528 GCGTTTCATATAAAA TAATTATG-CAGCCGATATCCACA AAAAG TGCGGATATCGGCTGTCGTAAA-A GAACCATGAATTTTA TERM 214 227573 - 227528 - R 100 -15 -4.38141 | gap 1, opp_overlap 227535, overlap 227525 TTTCATATAAAATAA TTATG-CAGCCGATATCCACA AAAAG TGCGGATATCGGCTGTCGTAA AAGAACCATGAATTT TERM 215 227535 - 227565 + r 95 -14.1 -2.78384 | opp_overlap 227528 227525 TAAAATAATTATGCA GCCGATATCCACA AAAAG TGCGGATATCGGC TGTCGTAAAAGAACC phoA 229098 - 227602 - | PhoA TERM 216 229806 - 229831 + G 74 -6.9 -4.30014 | gap 1, opp_overlap 229800 229801 AAGACAATACCGGAT TCTG-GGAATCG ATC CGATGCCGCAGA TTTTACGTTCATGAA TERM 217 230478 - 230488 + G 70 -4.6 -4.62471 | CGTTTGTTAAAGGAT CCTG CCT CGGG TTTTTCAGCGTTCCA TERM 218 230906 - 230892 - g 91 -2.8 -5.71638 | overlap 230894 GAACAATTAAAAAAA GATCTG GCC CAGATG GGAGTTTTTGATGAA TERM 219 230904 - 230894 - g 71 -5.4 -4.46828 | overlap 230892 ACAATTAAAAAAAGA TCTG GCC CAGA TGGGAGTTTTTGATG HRM2_01890 229374 - 231788 + | hypothetical protein psdD 231813 - 232850 + | PsdD TERM 220 233625 - 233644 + G 74 -3.6 -5.00884 | overlap 233629 TGGTGGTGACACAGG TTTGGAGA ATCC TCTCTGAA TTTTTTCGGGCGGAT HRM2_01910 232850 - 233914 + | hypothetical protein HRM2_01920 233914 - 234306 + | hypothetical protein dksA1 234964 - 234431 - | DksA1 TERM 221 234461 - 234473 + g 86 -2.7 -5.53991 | TCCGATGTCCCCGGA CAGAA TGG TTTTG TTTTTTTCGTAGCTG HRM2_01940 235171 - 235055 - | hypothetical protein HRM2_01950 235934 - 235392 - | mutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase) HRM2_01960 235987 - 236646 + | transcriptional regulator, homeodomain family protein TERM 222 238178 - 238194 + G 74 -4.3 -4.87665 | TGGCGGCGGTGCCGT GGGTGTT GAA ACCGCCC TTTTTCTGGCTGAAA HRM2_01970 236643 - 238646 + | predicted NADH:flavin oxidoreductase/NADH oxidase TERM 223 238838 - 238872 + G 76 -8.6 -4.1552 | gap 1 CCACGCCAATGTGGT TGTCCAG-GGCCAGG CCGGAC CCTGGCAGCTGGGCA TTTATTCCGACGATC HRM2_01980 238656 - 239762 + | predicted NADH:flavin oxidoreductase TERM 224 239784 - 239821 + T 100 -18.7 -2.66964 | overlap 239786 GAACCTGGGAGCGTT GATGACCCTTTGCTG CTCAAGTT CAGCAAAGGGTCATC TAGTGTCATCCCTGC TERM 225 239786 - 239819 + T 100 -15.5 -2.87647 | overlap 239784 ACCTGGGAGCGTTGA TGACCCTTTGCTG CTCAAGTT CAGCAAAGGGTCA TCTAGTGTCATCCCT nhaD1 241201 - 239846 - | NhaD1 TERM 226 241077 - 241095 + g 70 -3 -4.85599 | CAGATGGCGCCTGCG GCAAACAG AAC CGGCTTGC TTTTTCTCAGGTGAA TERM 227 241883 - 241872 - g 80 -2.2 -5.4593 | GGAAAAGAAGAAAAA CTCC TGGG AGAG CTTGCCATTCATAGG nhaR 241470 - 242366 + | NhaR fdx4 242874 - 242443 - | Fdx4 aor1 245014 - 243053 - | Aor1 TERM 228 243441 - 243465 + g 100 -6.9 -5.88197 | AATTTGCTGTTGATG GCCCCTGTCTC AGC GTGCCTGGGGC TTTTTTTGTATTTAC TERM 229 244137 - 244151 + g 70 -2.8 -4.7497 | overlap 244127 AAGCCCCAGTCCCTG CTGG TTCCCTT CCAG TTTTTGATGGGTGCG TERM 230 244511 - 244539 + g 74 -11.5 -3.1085 | overlap 244531 244534 CAACGAGCGGTTTTC CCCGGCAGGCCCG ATG CAGGCCACCCGGG TGTTGGGTCGGTTAC adh3 246341 - 245055 - | Adh3 TERM 231 245578 - 245592 + gr 100 -11.4 -4.62904 | AGGGCCAGGCGGCCG TCCCGG TCT CCGGGA TTTTTGACGGTGTTT adh5 247530 - 246289 - | Adh5 TERM 232 247521 - 247510 - GR 70 -3 -4.84359 | opp_overlap 247510 GGATCGGCATAAAAA TTGA GCAT TCAA TGGGTTCATTTTTCC HRM2_02050 248140 - 247610 - | hypothetical protein TERM 233 247846 - 247860 + g 76 -5.6 -4.82667 | opp_overlap 247843 247846, overlap 247843 AGGTAAAGAGAAGGA GCAGGG CGT CCATGC TTTTTAATGTCATGC HRM2_02060 248611 - 248273 - | hypothetical protein TERM 234 249027 - 249046 + GH 71 -8.6 -3.53012 | gap 1, overlap 249029 TATTCTTGCCGTGGG CA-CCTGGG CTG CCCAGGATG TTTCCAAGGCGGGGA TERM 235 249029 - 249043 + GH 80 -11.4 -2.60496 | overlap 249027 TTCTTGCCGTGGGCA CCTGGG CTG CCCAGG ATGTTTCCAAGGCGG HRM2_02070 248587 - 249771 + | hypothetical protein HRM2_02080 249768 - 250823 + | hypothetical protein HRM2_02090 253296 - 250843 - | inner membrane transport protein (PmrA-like protein) TERM 236 251053 - 251085 + g 91 -14.9 -3.54424 | opp_overlap 251052 251051 GATGATGCTCAAAGC CTTTCCCTCGCCCAG GGT CTGGGTGATGGGAAG TTTCAAGAGATAGGG TERM 237 252062 - 252049 - G 79 -8.1 -4.31815 | overlap 252045 AAAGGAGAAGAGAAA TGCGG CTGG CCGCA TATCCATGTAGTGGA TERM 238 252177 - 252142 - G 76 -3.2 -5.10163 | gap 1, opp_overlap 252173, overlap 252145 AAGTTCAAAAGAAAA CAAGATGGCGATGACCA GGA CGGTCA-CGGCATCAAG GCCAATGGCTTTAAT TERM 239 252174 - 252145 - G 82 -7.9 -4.6313 | gap 1, opp_overlap 252173, overlap 252142 TTCAAAAGAAAACAA GATGGCGATGACCA GGA CGGTCA-CGGCATC AAGGCCAATGGCTTT TERM 240 252251 - 252269 + g 91 -11 -4.33274 | CCCTCCTGGACCTCA CCCTCCTT AAC AAGGGGGG TTTTGATGGTATAGA HRM2_02100 255313 - 253313 - | predicted phosphoserine phosphatase RsbU (Sigma factor regulation protein RsbU) TERM 241 253375 - 253385 + g 71 -6.8 -4.20106 | overlap 253346 GGGCATCCCCTGCAT GGTC GAC GACC TTTTCCATGACATTT TERM 242 253409 - 253443 + g 73 -9.2 -3.65353 | GACATTTTCAATGGT CGCTTCAAGGCGGTCC AGG GGGCCGTTCTGAACCG TTTCCAGTAGTTTCC TERM 243 254465 - 254479 + g 73 -5 -4.65305 | AAGGGACGAGATATG GATCAG TTT TTGATC TTCTTTGTTTTTTTC TERM 244 254570 - 254584 + g 76 -11.4 -3.31263 | GACTCCCTCTGCAAG GCCCTG GGC CAGGGC TTCTGGCGGTGAGAT TERM 245 255009 - 255021 + g 73 -6.2 -4.4634 | ATCCATTTTTCTGCC CCGG TTTTC CCGG TTTCTTCTTCAAATT HRM2_02110 255732 - 255322 - | predicted anti-sigma F protein (E-sigma F) TERM 246 255373 - 255396 + g 80 -2.4 -5.44721 | CTCATTGTTGCAGCG TTCATAGGCG ACTT TGTCCATGAA TTTTTTTACCATCAT TERM 247 255534 - 255517 - G 76 -6.9 -4.53439 | TGAAATGGAAATAAA GACCTGG TCCC CCTGGTC CTCGAATCCTATGGA TERM 248 255801 - 255820 + r 71 -9.3 -2.90813 | overlap 255799 GAGTTTCATCTGTTG CCATGCC CCTCAA GGCATGG TCATTTAAAAAAATA TERM 249 255834 - 255850 + r 78 -9.5 -3.72576 | opp_overlap 255834 GGTCATTTAAAAAAA TAAACCG GTT CGGTTTA TTTCATCAGGCGAAA TERM 250 255850 - 255834 - R 100 -9.5 -5.47218 | opp_overlap 255834 GGTCATTTAAAAAAA TAAACCG GTT CGGTTTA TTTCATCAGGCGAAA HRM2_02120 256185 - 255856 - | predicted anti-anti-sigma factor (ant-sigma factor regulator) TERM 251 256298 - 256284 - H 78 -5.6 -4.89477 | CCTTTAAGAATAAAA CAGCCC ACA GGGTTG AATAAATCAGTTCCC TERM 252 256447 - 256432 - H 80 -10.4 -3.53733 | opp_overlap 256438, overlap 256430 CTTACTTGATAAAGA GGTGGG CATT CCCACC ATGGCGAATGTTCTC HRM2_02130 256448 - 256654 + | hypothetical protein TERM 253 256990 - 257023 + G 90 -15.3 -3.33315 | overlap 257017 TTTGATGCTTTGACC CCCGGCCCTGCAAAG GCGT CTTTGTGGGCCCGGG TTGTCGGCCTGTTCA TERM 254 257633 - 257622 - g 70 -3 -4.86731 | CTGGTGGAAACAAAA TGAA GACT TTCA GACCTTTAACGGGGC hcp1 256681 - 258396 + | Hcp1 TERM 255 258411 - 258423 + T 71 -4.8 -4.62336 | opp_overlap 258405 258406 ATTTTATAACTGTTT CAGG ATCAC CCTG TTTTTCCAATGGGGT HRM2_02150 261000 - 258481 - | helicase-family protein TERM 256 258699 - 258686 - G 84 -2.4 -5.60993 | TTTTCCACAAAAAAA CAGA GGTGGG TCTG GATGGTGTTTTCCAC TERM 257 258876 - 258898 + g 74 -2.6 -5.1287 | overlap 258861 CTGGGGGCTGGGGCA GCACCACGGT TTC AATGTTGTGC TTTTTTCGATATGCC TERM 258 259262 - 259301 + g 90 -9.4 -4.64334 | overlap 259263 ATGCCGGCACGTTTC ACGGCAATCTCCTG CCTGACATTGTT CAGGAGATTGCCGA TTTTCTTACCCAGTT TERM 259 259263 - 259300 + g 82 -12.9 -3.37877 | overlap 259262 TGCCGGCACGTTTCA CGGCAATCTCCTG CCTGACATTGTT CAGGAGATTGCCG ATTTTCTTACCCAGT TERM 260 259865 - 259877 + g 71 -5.5 -4.43844 | opp_overlap 259851 259865 ATGGCCTTTTCAAAG GTCAG CCC CTGGC TTTTATGGATGGTAA TERM 261 261244 - 261255 + r 85 -4.4 -5.57054 | CGACGTATCAATGGG CAAG GTTT CTTG TTTTTTTACGTTATT HRM2_02160 261613 - 261266 - | putative glyoxalase/dioxygenase/bleomycin resistance protein TERM 262 261331 - 261316 - G 100 -6.8 -5.59879 | opp_overlap 261316 261316, overlap 261307 CATAAAGATAAAAAA CCCTGG CACC CCAGAG GTCTTTGATCGGTGT TERM 263 261743 - 261780 + r 100 -7.8 -5.38549 | gap 1, opp_overlap 261751, overlap 261751 TGCCTCCCGGGGAAA CA-AAAAAAGGCAGGGG AAATC CCCCTGCCTTTTACCTG TTTTTGTTGTTTAAA TERM 264 261771 - 261751 - R 100 -14.7 -5.95539 | opp_overlap 261743 261751 GGGGAAACAAAAAAA GGCAGGGGA AAT CCCCCTGCC TTTTACCTGTTTTTG TERM 265 261751 - 261771 + r 100 -14 -4.37991 | opp_overlap 261751, overlap 261743 GGGGAAACAAAAAAA GGCAGGGG AAATC CCCCTGCC TTTTACCTGTTTTTG HRM2_02170 262281 - 261865 - | putative tetratricopeptide repeat protein (TPR repeat family protein) HRM2_02180 263365 - 262802 - | hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb) HRM2_02190 263865 - 263365 - | predicted RNA polymerase ECF-type sigma factor(extracytoplasmic function) HRM2_02200 264846 - 263935 - | hypothetical protein TERM 266 264557 - 264573 + g 76 -8 -4.2704 | TCCCGGACTTGTTTA GCCATG CCTTC CATGGC TTTGTTAATAATCGG HRM2_02210 265520 - 265077 - | hypothetical protein TERM 267 265895 - 265880 - g 100 -6.2 -6.17268 | GGAGAATAAAAAAAA TCATTC AACA GAATGA TCCCCGCAGATTAAA HRM2_02220 265720 - 267027 + | hypothetical protein cobU 267945 - 267415 - | CobU cobQ 269472 - 267970 - | CobQ TERM 268 269405 - 269417 + g 73 -6.3 -4.58395 | GATCTGCAAAGGGCA GCATT GAC AATGC TTTTTCCCACATCAG cobO 269984 - 269469 - | CobO TERM 269 269799 - 269788 - G 76 -7.2 -4.36914 | opp_overlap 269788 269786 TTGCCTTTGACAAAA CGGC CAAG GCCG TATTGTTCGACGGTG TERM 270 269922 - 269938 + g 80 -4.3 -5.10154 | GGCCCTGACGCTCAG CCCCAGT GAT GCTGTGG TTTTTCCTTTTCCGT cobJ 270884 - 270000 - | CobJ TERM 271 270466 - 270495 + gr 72 -3.6 -4.84017 | gap 2, overlap 270455 270466 TGATCTCCATGGTGT GGGG-TTC-CGTGG CGGA CCAGGTGAATCCCC TTTTTCTGACACATT cbiG 271930 - 270749 - | CbiG cobM 272709 - 271927 - | CobM cobL 273962 - 272706 - | CobL HRM2_02300 275014 - 273959 - | hypothetical protein TERM 272 274815 - 274784 - G 82 -7.2 -4.6902 | opp_overlap 274808 TGAGAATCTGAAAAA GGGCCGGGCAAC AACAGAGA GTTGCCGGGTCC ACCCGGTTGCCTCGA TERM 273 274945 - 274907 - G 76 -12.5 -2.57463 | gap 1, overlap 274906 AAGTCTGTTCACAAG GGTGGCTGTGTCCACAGG GCGA CCTGTGGACAGA-CCTCC GCCCACGAGCATAAG cbiL 275718 - 275011 - | CbiL TERM 274 275770 - 275753 - R 77 -8.4 -3.91352 | opp_overlap 275753 ACATGGTGAAGGAAA CGGACC TGTCCG GGTCCG TGTCTCTCCGGATTT HRM2_02320 276819 - 275785 - | Fe(III) ABC-type transporter, periplasmic substrate-binding protein TERM 275 276724 - 276737 + gr 82 -3.7 -5.22006 | GACCATGAAAAGGCT CAGCC ATAG GGCGG TTTTTATTCTGCTGA HRM2_02330 277543 - 276758 - | Fe(III) ABC-type transporter, ATP-binding protein TERM 276 277119 - 277133 + gr 71 -8.5 -3.55973 | overlap 277116 CATCGCTGGCGTTCC CCGCC GCTCA GGCGG TTGATTCTTCGGTTC HRM2_02340 278544 - 277552 - | Fe(III) ABC-type transporter, putative permease protein TERM 277 278531 - 278560 + g 73 -8.7 -3.70773 | gap 1, opp_overlap 278531 CCGACTAGAAGAAAA GAGAACAGGAGC ACCAGAA GC-CCTGTTCTC TTCTTCCATATGGCG TERM 278 278560 - 278531 - G 91 -8.7 -4.81212 | gap 1, opp_overlap 278531 CCGACTAGAAGAAAA GAGAACAGGAGC ACCAGAA GC-CCTGTTCTC TTCTTCCATATGGCG TERM 279 278621 - 278637 + H 84 -10.9 -3.70773 | opp_overlap 278618 278621 TCCTATTATATATGA TGGAGAC TGG GTCTCCA TTGTTCCATGTGAAA TERM 280 278637 - 278621 - H 76 -10.9 -2.71268 | opp_overlap 278621, overlap 278618 TCCTATTATATATGA TGGAGAC TGG GTCTCCA TTGTTCCATGTGAAA TERM 281 278696 - 278670 - H 100 -11.7 -5.95539 | opp_overlap 278669 278691 GTGTAAACAAAAAAA CCCATATCGAC ATTTA ATCGATATGGG ATTCCGTATTTATCC TERM 282 279523 - 279502 - g 79 -5.1 -5.00138 | overlap 279495 CATTTAAAGGAAAAA CCCCTTGAG CTTT CCCAAAAGG TCTCCGGTATCCTTG TERM 283 279610 - 279631 + G 93 -3.6 -5.78622 | opp_overlap 279599 AAAACCCATGTGGTG GGTGCAGG GTTTGA CCAGCATC TTTTTTTTCCGGTCG HRM2_02350 279031 - 280254 + | putative glycogen synthase (starch [bacterial glycogen] synthase) HRM2_02360 281050 - 280244 - | hypothetical protein HRM2_02370 284296 - 281153 - | cobalt-zinc-cadmium resistance protein CzcA-like protein HRM2_02380 285485 - 284286 - | putative membrane-fusion protein TERM 284 284620 - 284596 - G 70 -9.3 -3.53563 | overlap 284612 284618 AGATTCTGCCCCAAA GGATCCTTGAT GGA AACAAGGACCC TGGCAAGGCGGCTCT TERM 285 285084 - 285108 + g 86 -2.7 -5.63236 | TTCAAGGTTAAGCTC GGCTTCGGTTT TGA GAACCAGTGCC TTTTTCTTTTTAAGT TERM 286 285522 - 285534 + r 74 -7.7 -4.04206 | GGTCACTTTTGTTTT CCAAG GTT CTTGG TTTGTGTGAAGCTCC HRM2_02390 286771 - 285509 - | outer membrane efflux protein TERM 287 285569 - 285581 + g 71 -7.7 -3.97368 | AAGGGAGCGGTACAG GGCAA TTC TTGCC TTTATCAGTTCAGCC TERM 288 285918 - 285892 - G 71 -5 -4.56597 | overlap 285894 285895 TCCCGCCGTCAAAAA CAGTTGCGGCCA TGT TGGCCCCAAGGG AGAGGATCCATGAAT TERM 289 287595 - 287583 - H 78 -10.5 -3.28791 | overlap 287584 AGTTGCTTCTTATAA CCGGC ACG GCCGG AGCGAGTTATGGCTC TERM 290 287621 - 287584 - H 71 -9.7 -2.57132 | overlap 287583 GTTGCTTCTTATAAC CGGCACGGCCGGAGCGA GTTA TGGCTCCGGCCTCAACG AATTTTGAAACACCT HRM2_02400 287704 - 288480 + | hypothetical protein HRM2_02410 290273 - 288507 - | two-component hybrid sensor and response regulator histidine kinase (phoR-like protein) TERM 291 288731 - 288741 + g 76 -8.2 -4.25104 | opp_overlap 288720 288722 CAATCACCCGGATCA GGGC GCT GCCC TTTTCCTGAGCCACC TERM 292 289013 - 289041 + g 70 -3.1 -4.88736 | gap 1 AAAGGGCCATGAGGT CGTCCACCAGGG CAATCA TCC-GGTTGACG TTTTTCTCGATGATG TERM 293 289534 - 289549 + g 100 -6.8 -5.56263 | GCTTCAAGTTCCATG GTGCGG TCTT CTGCAC TTTTTATTTTCTCGT TERM 294 290044 - 290027 - G 71 -6.9 -4.12603 | opp_overlap 290027, overlap 290021 CCGAGGAAAGAATAA CCGTCAC CCTT GTGCCGG TTGTCCTGCCAATGG HRM2_02420 290967 - 290266 - | two-component DNA-binding response regulator TERM 295 290330 - 290340 + g 84 -2.4 -5.60993 | TCGATGAAATCGGCA CAGG GCC CCAG TTTTTTTCTCAAACC TERM 296 291397 - 291415 + G 70 -10.2 -2.90238 | opp_overlap 291394 291395 TGCCAAATATAACCT GCCGGCAG ACC CTGCCTGC TATAGTGTCTGGTAT TERM 297 291581 - 291571 - g 71 -6.8 -4.2231 | AACCATCACGGAAAA CCTG CTC CAGG AGTTGCGGATCGTTA HRM2_02430 291320 - 292339 + | signal transduction family protein (GGDEF domain protein) phoU2 293050 - 292397 - | PhoU2 pstB2 293822 - 293061 - | PstB2 pstA2 294676 - 293822 - | PstA2 TERM 298 294060 - 294034 - G 85 -3.6 -5.40072 | opp_overlap 294034 CCGGCGTGAAAAAAA CAGCGCCCGT GTACATG ATGGGGGCTG TTTCCCCGGCGGCCC TERM 299 294328 - 294311 - G 86 -6.9 -4.94222 | AACAATGCAGAAAAA GGCCAGT CCGA ACAGGCC AAAAACCACGGACGG TERM 300 294560 - 294546 - G 71 -6.4 -4.38712 | overlap 294556 GGCATTGTCAGAAAA GACCAT GAA ATGGCC CGCCACCCCCGGGAG pstC2 295567 - 294677 - | PstC2 pstS3 296382 - 295567 - | PstS3 HRM2_02490 296921 - 296460 - | predicted anti-sigma regulatory factor RsbW1 (serine/threonine protein kinase) HRM2_02500 298045 - 296924 - | putative two-component response regulator receiver protein (phosphoserine phosphatase) TERM 301 296993 - 296983 - G 82 -4 -5.32882 | CACCACCAGAAAAAA TGTT TTG AACA AGGGCCGAAGGTGCC HRM2_02510 298372 - 298052 - | HPt domain protein HRM2_02520 299327 - 298452 - | putative coenzyme F420-dependent NADP oxidoreductase TERM 302 298873 - 298845 - G 70 -9 -3.59979 | gap 2, opp_overlap 298845, overlap 298848 GGTGGGGATGGTAAA GGA-CATTGC-GCC AAG GGCCGCAATGATCC TTGTTCCCTCAGCAA TERM 303 298845 - 298873 + g 73 -9 -3.67597 | gap 2, opp_overlap 298845 298848 GGTGGGGATGGTAAA GGA-CATTGC-GCC AAG GGCCGCAATGATCC TTGTTCCCTCAGCAA TERM 304 299103 - 299087 - G 70 -8.7 -3.61398 | CTTTTTTTTCAACAA GGGTGTC AAA AACACCC TGAATGGCATCGTCC TERM 305 299284 - 299273 - G 76 -7.2 -4.4078 | CCTGGGCAAGGAAAA CGGC AAGG GCCG TTCCCACCCGCCCGC panB 300115 - 299324 - | PanB TERM 306 300662 - 300636 - g 70 -10 -3.31144 | GGCCCATGTTTAGAA GGGAGCGCCCCC AGA AGGGTCGCTACC GCCAGTTCTTCCAGA hisS 300302 - 301579 + | HisS TERM 307 302877 - 302887 + G 71 -6.8 -4.21936 | ACCTACCGGTTTGTA TGGG TCA CCCA TTTTCCCCTTGTGGA TERM 308 303101 - 303089 - g 76 -7.7 -4.28361 | GGAACTCCAGGAAAA GGTGT TGA ACACC CTTGGCATCGGCAAA aspS 301572 - 303362 + | AspS xpt 303359 - 303940 + | Xpt HRM2_02570 303947 - 304768 + | hypothetical protein minE 305043 - 304777 - | MinE minD1 305854 - 305054 - | MinD1 minC 306597 - 305911 - | MinC TERM 309 306744 - 306716 - R 100 -12.4 -4.2772 | gap 1, opp_overlap 306716 306717, overlap 306717 GTCAAGTAATATAAA CCCCGGGGC-GGT TTTA ACCTGCCCCGGGT GGTTCGGGTGGACAA TERM 310 306717 - 306743 + r 100 -15.9 -2.73364 | gap 1, opp_overlap 306716 306717, overlap 306716 TCAAGTAATATAAAC CCCGGGGC-GGT TTTA ACCTGCCCCGGG TGGTTCGGGTGGACA TERM 311 306743 - 306717 - R 100 -15.9 -3.15909 | gap 1, opp_overlap 306716 306717, overlap 306716 TCAAGTAATATAAAC CCCGGGGC-GGT TTTA ACCTGCCCCGGG TGGTTCGGGTGGACA HRM2_02610 307905 - 306760 - | histidine kinase/response regulator HRM2_02620 308595 - 307933 - | DNA-binding response regulator (LuxR-family protein) HRM2_02630 311612 - 308601 - | putative metalloprotease TERM 312 310569 - 310552 - G 71 -11.3 -2.74263 | overlap 310551 ATGTCAGGGTCAAAG CCTGAGC CATC GCTCAGG GCCGAACCGAGATTG TERM 313 310939 - 310917 - G 71 -5.5 -4.4767 | opp_overlap 310917 310930, overlap 310930 GGAGGGATGATAAAA CCTTGCATG AAAGG CACGCAGGG CTTCGTGGGTCAGGG HRM2_02640 312039 - 311590 - | hypothetical protein TERM 314 312221 - 312198 - H 79 -6.9 -4.63179 | opp_overlap 312200 AAATAATAACCAAAA TAGATATAG GATATA CTATATCTA ATTACAATTACTTGC HRM2_02650 312286 - 312828 + | hypothetical protein ksgA 312825 - 313679 + | KsgA TERM 315 313850 - 313837 - g 71 -6.7 -4.18494 | GATCCTCATGGAAAA GGGAA TCAG TTCCC TGCCCACTTCGGGAA TERM 316 313955 - 313945 - g 79 -8.2 -4.3255 | overlap 313947 GGGCGAACGAACAAA GGCG AAG CGCC CTGCCCCGATTGCCG HRM2_02670 313676 - 315073 + | hypothetical protein TERM 317 315184 - 315167 - g 71 -6.9 -4.18401 | overlap 315168 TCAGACATTGCAAAA CGGGTGG CTGC CCACCAG GAGAGCCATCCTGGG TERM 318 315623 - 315643 + G 70 -9.1 -3.63744 | opp_overlap 315623, overlap 315601 315621 GATCTTCCACAAGAA CAGGTAGAT CTT ATCTATCTG TGTTTTCCCAACAAC TERM 319 315931 - 315917 - g 70 -4.2 -4.72272 | opp_overlap 315917 GTGTTTGATCAAAAA GGCG CCGCCAT CGCC CTTCATCCCCTATGG TERM 320 316157 - 316173 + G 80 -2.1 -5.44721 | overlap 316159 316166 TGGATAAACGGCAAC GGTCGGG ATT CCTGGGC TTTTTTTGACCTGCT TERM 321 316217 - 316227 + G 74 -8.2 -4.09685 | opp_overlap 316200 316199 GGGGTGGTCTGCACG CCGG GTA CCGG TTTTGGACAATGCGG HRM2_02680 315101 - 316330 + | predicted aspartate aminotransferase (transaminase A) (AspAT) TERM 322 317363 - 317387 + G 71 -6.3 -4.41241 | opp_overlap 317363 317361, overlap 317365 GACTCTCGAGAAACA TTGCCTCGGCC CAG GGCAGAAGCGA TTTTGTCAGGGTTTG moeA1 316327 - 317568 + | MoeA1 TERM 323 317611 - 317599 - f 82 -10.5 -3.72576 | CCCTTGTCCATTAAA CCGGC ACG GCCGG GGTGAGAGATGGCAT TERM 324 318309 - 318297 - f 86 -10.5 -3.86524 | AGAGTTTCTTATAAA CCGGC ACG GCCGG AACGATGTATCTGCT TERM 325 318399 - 318387 - f 89 -10.5 -4.03234 | overlap 318388 GGTGTTTCATATAAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 326 318425 - 318388 - f 73 -9.7 -3.01726 | overlap 318387 GTGTTTCATATAAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATTTTGAAACGCCG TERM 327 319341 - 319352 + G 74 -7.2 -4.17048 | GGGTTACCATGATGC CGGG CAAA CCCG TTCTTTTCGGAACCA TERM 328 319886 - 319862 - g 74 -2.6 -5.14965 | ATGGCCATCAAAAAA GGGACCTGTC ACATG GCCGGGGCCC ACCTGCTTGACCCCG TERM 329 320078 - 320096 + G 70 -8.8 -3.54146 | overlap 320076 320081 ATTAACCGCCAGGCC GGATCCGG CAC CCGGATAC TGTTTGATTACAAGC moeA2 318497 - 320431 + | MoeA2 gltA1 321735 - 320440 - | GltA1 TERM 330 321219 - 321233 + g 72 -10 -3.36492 | overlap 321216 TGGAGATCTTGTAGG CCATGG CGG CCATGG TTCTGACCTTGGAGA HRM2_02720 322059 - 321805 - | hypothetical protein TERM 331 322167 - 322208 + r 78 -4.3 -5.24129 | opp_overlap 322156 322176, overlap 322157 322170 322171 AATAGGGGAAATGAT TTGTAAGCATCTCCCTTGC ATGG GCCAGGGTGGTGCTGGTGA TTTTTTCTCCGCCGA recN 323856 - 322150 - | RecN TERM 332 322687 - 322677 - GR 74 -4.6 -4.87665 | opp_overlap 322685 322686, overlap 322685 TGTGACCCAGAAAAA CCAC AAA GCGG GTATTACCCATTTCA HRM2_02740 324778 - 323813 - | putative Fe2+ transport system protein B TERM 333 323933 - 323917 - GR 71 -8.7 -3.29461 | overlap 323905 323932 TAATGGCCGCCACAA GCCTTGG CAT CCAAAGC CACAGGGGGGCGATT livF1 325485 - 324778 - | LivF1 TERM 334 324807 - 324823 + g 73 -5.1 -4.72846 | overlap 324806 AGGCTTTTTTTACAT CCTCGTT GGC AAGGAGG TTTTTACCTGTATCG livG1 326272 - 325478 - | LivG1 TERM 335 325911 - 325923 + g 74 -4.7 -4.88067 | CCCCTGAGGATTGCC CCGAG GAC CCCGG TTTTTGTAACTGGAT livM1 327474 - 326269 - | LivM1 TERM 336 326581 - 326614 + g 70 -11.1 -2.53876 | overlap 326579 326583 326584 GGCCCAGGTAGCCCC CAGGGCAAAGGCC CTCAGTTT GGTCTTTGCCTTG TCGATTCCCATGGCC livH1 328398 - 327490 - | LivH1 TERM 337 328492 - 328454 - R 100 -10.8 -4.52589 | opp_overlap 328457 328460 328483, overlap 328455 GTTCTGGATACAAAA GGGGGGCGGGCCCAAAGC CTG GTCTTGTGCCCGTCCCCG GGTGATTCCGTTCAA TERM 338 328491 - 328455 - R 100 -14.3 -3.31232 | opp_overlap 328457 328460 328483, overlap 328454 TTCTGGATACAAAAG GGGGGCGGGCCCAAAGC CTG GTCTTGTGCCCGTCCCC GGGTGATTCCGTTCA livJ1 329648 - 328524 - | LivJ1 ppnK 329890 - 330720 + | PpnK HRM2_02810 331645 - 330731 - | hypothetical protein TERM 339 331318 - 331305 - G 84 -2.3 -5.67063 | overlap 331306 331316 CCCAGCACAAAAAAA GCCCC AAAG GAGAC CATGAGCGGGCACAG HRM2_02820 332978 - 331650 - | hypothetical protein TERM 340 331682 - 331702 + g 70 -4.7 -4.74013 | AATTAATCAACTTGT CCATCATTA TCT TGAGGATGG TTTTGTCTGTTTCGA TERM 341 331840 - 331823 - G 90 -9.1 -4.62069 | opp_overlap 331830, overlap 331825 CGTTCATGGCAAAAA GGGCTGC CTGG ACAGCCC TGGCGGCAGCGGTGT TERM 342 332699 - 332716 + g 74 -7.7 -4.13945 | opp_overlap 332711 CATCCTTGTCCGTGA TGGGGGT AAGC ACCTCCA TTTTGAGGTGGGCAT fixL 334243 - 333050 - | FixL TERM 343 333886 - 333905 + g 83 -2.7 -5.46698 | GCCATATTTCACAGG GGCTGCC GATGGG GGGGGCC TTTTTTGCTTTTGCA TERM 344 334321 - 334291 - H 95 -7.6 -5.0538 | opp_overlap 334291 334293 TTTTAGGCGAAAAAA TAGAATCCGCCGGT TAA ACCGGACAATTCTA AATTTTGATTAATAT HRM2_02840 334383 - 335306 + | hypothetical protein TERM 345 335767 - 335744 - g 84 -4.6 -5.35222 | gap 1 AAAAGGGAGAAAAAA TCATGAGTGTC GTT GCCAC-CATGA TCGCCCGCCATGTGA HRM2_02850 335293 - 336816 + | predicted nitrogen fixation specific regulatory protein AnfA (transcriptional regulator, nifA-family protein) HRM2_02860 336827 - 337519 + | hypothetical protein TERM 346 337566 - 337550 - f 70 -2.9 -5.01732 | AATGGGTTGAAAAAA GAGACCT CCG AGTTCCC ATATGATTTGAACCA TERM 347 337774 - 337797 + F 74 -10.4 -2.60992 | gap 1, opp_overlap 337767, overlap 337773 337771 ACAAGTAACTGCCAC GGAGGCTGATT CAA AATC-GCCTCC CTATTTCAACCCCTT HRM2_02870 337828 - 338202 + | hypothetical protein HRM2_02880 338256 - 338606 + | hypothetical protein HRM2_02890 338909 - 338613 - | hypothetical protein HRM2_02900 341207 - 339015 - | hypothetical protein TERM 348 339104 - 339093 - G 70 -4.4 -4.62069 | GGGTGAGGGGAAAAA TACC CCCT GGTA CTTGCAGCCATCCAC TERM 349 340068 - 340056 - G 74 -4.7 -4.82901 | opp_overlap 340063, overlap 340057 GCCGCTGCAGAAAAA TCCCC GGT GGGGG TTGCAAATGCCCATG TERM 350 340188 - 340200 + g 76 -7.7 -4.32607 | AAATCCAGAGGTGAT GAGCA GCA TGCTC TTTATTCCCTTTTGC HRM2_02910 341827 - 341204 - | HTH-type transcriptional regulator (TetR-family protein) TERM 351 341887 - 341873 - H 73 -7.2 -4.23213 | opp_overlap 341873 341873 TGGACAGGGAATAAA GTAAGT ATT ACTTAC TTACCTAAAATAAAT HRM2_02920 342253 - 344187 + | molybdopterin oxidoreductase domain protein HRM2_02930 344862 - 344380 - | hypothetical protein HRM2_02940 345314 - 344844 - | hypothetical protein HRM2_02950 345914 - 345315 - | DNA-directed RNA polymerase sigma factor TERM 352 345955 - 345941 - H 74 -4.2 -5.055 | opp_overlap 345946 CCAAGGTTTAAAAAA TAGCCC CCG GGGTTA ACGGCGACCCGGGTT TERM 353 346384 - 346397 + H 72 -8.1 -3.83502 | overlap 346383 GCCGTTTTATTGATT CACCC TGGT GGGTG TTTCGTATAGAAGTA uspA9 346538 - 347473 + | UspA9 etfA1 348439 - 347450 - | EtfA1 etfB1 349242 - 348436 - | EtfB1 TERM 354 348585 - 348596 + g 70 -2.2 -4.99643 | opp_overlap 348588, overlap 348588 GTTTATCCTGGGGAA CGAT AACC GTCG TTATTTTTTTTGATC TERM 355 348588 - 348599 + g 100 -3 -5.86061 | opp_overlap 348588, overlap 348585 TATCCTGGGGAACGA TAAC CGTC GTTA TTTTTTTTGATCCGG TERM 356 349367 - 349355 - H 74 -4.1 -4.92385 | overlap 349344 349357 GAGAGTCAAATAAAA TTGAC ATT GCCAA TATCGTGTAAAAAAT TERM 357 349802 - 349827 + G 70 -3.3 -4.80453 | gap 1 CATTCTCTGGGAAGT GC-CACTCATGG CCA TCATCAGTGAGC TTTATTTTGTCATGA pncB 349449 - 350618 + | PncB TERM 358 350867 - 350853 - g 70 -4.2 -4.62069 | opp_overlap 350853 TTGCCAGGTCAAAAA CAGCCT TTG ACGCTG TTTACGCAGGCAGCA HRM2_03000 350729 - 351451 + | Phosphoglycerate mutase (PGAM) / bisphosphoglycerate mutase (BPGM) HRM2_03010 351474 - 352682 + | acyl-CoA dehydrogenase (ACAD) / acyl-CoA oxidase-like protein TERM 359 353018 - 352998 - g 74 -9.7 -3.60296 | opp_overlap 352997 352998 TACGGTTATTTCAAA GGCAAGGAG GAA CTGCTTGCC ATTATCCAGCGCCAG TERM 360 353143 - 353153 + G 70 -2.4 -4.97824 | overlap 353140 TCTTGAGCGAAAAGG CCCG GCC CTGG TTTTATTTCACTTTT HRM2_03020 352746 - 353477 + | HTH-type transcriptional regulator (TetR-family protein) TERM 361 353701 - 353681 - g 82 -7.5 -4.66537 | opp_overlap 353697 353698, overlap 353682 GGCGCCAAGATAAAA TCAGCCCAT GAC ATGGGCCGG GAATACCGGATTCTG TERM 362 353700 - 353682 - g 77 -11 -3.3944 | opp_overlap 353697 353698, overlap 353681 GCGCCAAGATAAAAT CAGCCCAT GAC ATGGGCCG GGAATACCGGATTCT HRM2_03030 353468 - 354535 + | putative aminoglycoside phosphotransferase TERM 363 355419 - 355393 - g 76 -8 -4.26903 | TGTACGGCATCAAAA CTGGACAGGGAT TTT ACACCTATCCAG ATCCCATTTTTTCAC HRM2_03040 354555 - 355457 + | putative 3-hydroxyacyl-CoA dehydrogenase fabG1 355471 - 356229 + | FabG1 HRM2_03060 356569 - 358374 + | acyl-CoA dehydrogenase family protein TERM 364 358360 - 358378 + F 85 -2.4 -5.78622 | overlap 358362 GAAGCGACCCGGGAA CACTTTAA CGA TTAAGGGG TTTTTTTTAACCTCG TERM 365 359002 - 358991 - g 72 -3.6 -4.87291 | overlap 358994 CATGGCAATCAAAAA GACC CAAC GGCC CAGACTGCCTGCACC HRM2_03070 358418 - 359236 + | nitroreductase family protein (Putative NADH dehydrogenase/NAD(P)H nitroreductase) TERM 366 359728 - 359687 - g 90 -8.7 -4.72272 | gap 1, overlap 359689 GCCGTCGAGGAAAAA TCCAACGGC-CGGGTCGTGG TAA CCACCTCCCACACCGTTGAA ATTGAAGGGCAGGAA HRM2_03080 359327 - 359794 + | hypothetical protein TERM 367 360144 - 360123 - g 87 -7.3 -4.91573 | gap 1, opp_overlap 360122 360123, overlap 360124 AAAATATAGTAAAAA CTGCCGT-GG ACA CCTACGGCAA GGTTGATATTCTCAT fabG2 359864 - 360772 + | FabG2 HRM2_03100 361538 - 360885 - | HTH-type transcriptional regulator (TetR-family protein) TERM 368 361458 - 361445 - G 72 -9.5 -3.40403 | opp_overlap 361444 361443 GCTCTGCCAGGATAA GCCGG GTAC CCGGC AGTTTTACACCGGTG racD1 362345 - 361620 - | RacD1 TERM 369 362363 - 362410 + r 100 -11.5 -4.49556 | gap 2, opp_overlap 362369, overlap 362365 362367 362368 AAAATGGCACTCCTT GTACAA--CTCCTTCTTCCGGCA TCCG TGCCGGAAGAAGGAGAATTGATC TTTATTTCCTGAAAG TERM 370 362365 - 362408 + r 100 -12.7 -3.85603 | gap 2, opp_overlap 362369, overlap 362363 362367 362368 AATGGCACTCCTTGT ACAA--CTCCTTCTTCCGGCA TCCG TGCCGGAAGAAGGAGAATTGA TCTTTATTTCCTGAA TERM 371 362367 - 362404 + r 100 -17.1 -3.57662 | opp_overlap 362369, overlap 362365 362363 362368 TGGCACTCCTTGTAC AACTCCTTCTTCCGGCA TCCG TGCCGGAAGAAGGAGAA TTGATCTTTATTTCC TERM 372 362368 - 362403 + r 100 -20.6 -2.73513 | opp_overlap 362369, overlap 362367 362365 362363 GGCACTCCTTGTACA ACTCCTTCTTCCGGCA TCCG TGCCGGAAGAAGGAGA ATTGATCTTTATTTC TERM 373 362402 - 362369 - R 100 -24.1 -3.29144 | opp_overlap 362368 362367 362365 362363 GCACTCCTTGTACAA CTCCTTCTTCCGGCA TCCG TGCCGGAAGAAGGAG AATTGATCTTTATTT HRM2_03120 362836 - 362456 - | putative translation initiation inhibitor (YigF-like protein) HRM2_03130 364057 - 362858 - | aminotransferase, DegT/DnrJ/EryC1-family protein TERM 374 363217 - 363190 - G 70 -3.4 -4.82901 | GGTCGGGCAGAAAAA GCCCTGGA ATTTTTTTTAGA CCCAGGGC CAGGCGGTCATACCG TERM 375 363662 - 363676 + g 80 -2.8 -5.252 | CAGCAACCAGTGCAC GTCAGA CGA TTTGGC TTTTTTATCAAGATC hisD1 365380 - 364070 - | HisD1 TERM 376 365479 - 365454 - R 72 -9.3 -3.13899 | overlap 365452 365468 AACCGGGTATCAATA GATTTTATAAA ATAT TTTATAAAATC ATAAAAGTAATAGAT TERM 377 365536 - 365571 + r 75 -10.4 -2.87354 | opp_overlap 365535 365536 365539, overlap 365533 365530 TGATCCTTTTTAAAG GTATCCTTTGGCCGGA AATG TCCGGCCAAAGGGGGA TGGTTAGTTCATTAG TERM 378 365568 - 365539 - R 100 -16.5 -2.64155 | opp_overlap 365536 365533 365530, overlap 365536 365535 TCCTTTTTAAAGGTA TCCTTTGGCCGGA AATG TCCGGCCAAAGGG GGATGGTTAGTTCAT dctM1 366867 - 365575 - | DctM1 dctQ1 367466 - 366864 - | DctQ1 TERM 379 367483 - 367518 + r 86 -11.9 -2.91274 | gap 2, opp_overlap 367517 GCAGACTCCAGGGTG GCT--CCTGCCCGGCTG TGAT CTGCCGGGCAGGTAAGC TATGGTTAGCGTCCG dctP1 368294 - 367524 - | DctP1 HRM2_03180 368518 - 368234 - | hypothetical protein TERM 380 368568 - 368553 - R 75 -10.4 -2.8341 | opp_overlap 368552 368551, overlap 368550 TTAAAGAACAGAGCA TCCCGG AATC CCGGGA ATGTGGTTTAACCCC TERM 381 368718 - 368696 - R 100 -9.9 -5.71712 | gap 1, opp_overlap 368696 368714 CTGGATATAAAAAAA CCGGACAGCC AAAC GGCT-TCCGG TTTTTGTCAAAACGG TERM 382 368696 - 368718 + r 100 -9.9 -4.82901 | gap 1, opp_overlap 368696, overlap 368714 CTGGATATAAAAAAA CCGGACAGCC AAAC GGCT-TCCGG TTTTTGTCAAAACGG TERM 383 368912 - 368863 - R 79 -7.7 -4.33258 | opp_overlap 368869 368871 368874, overlap 368864 368868 ATTTCCAAAGAGAAA GTCAATTATTTTATAAAATATAT TTAA ATATTTTTTATAAAATAATTAAA ACACCATTTATGAGA TERM 384 368911 - 368864 - R 79 -11.2 -3.19232 | opp_overlap 368869 368871 368874, overlap 368863 368868 TTTCCAAAGAGAAAG TCAATTATTTTATAAAATATAT TTAA ATATTTTTTATAAAATAATTAA AACACCATTTATGAG TERM 385 368907 - 368868 - R 76 -9.8 -3.39488 | opp_overlap 368869 368871 368874, overlap 368864 368863 CAAAGAGAAAGTCAA TTATTTTATAAAATATAT TTAA ATATTTTTTATAAAATAA TTAAAACACCATTTA hdrF1' 369920 - 369048 - | HdrF1' TERM 386 369472 - 369484 + g 77 -10.5 -3.61486 | overlap 369467 AGGGCTATTTTTTCA GGCGC CAG GCGCC TTGTGATCTTTTCCT hdrF1 371620 - 369917 - | HdrF1 TERM 387 370075 - 370093 + g 80 -2.4 -5.42259 | AATTCCAGACCATGG GGGATG CTGTGGC CATCTC TTTTTTTCCCAGTCG TERM 388 370469 - 370483 + g 71 -5.6 -4.58663 | AAGGACAGCAGCACG GGGATC CTT GAGCCC TTTTTCCGCCATGGT TERM 389 371348 - 371338 - G 79 -6.8 -4.7219 | GATACCAATAGAAAA GACC CGA GGTC ACATCATCCAGGGCA glpB1 372906 - 371617 - | GlpB1 glpA1 374507 - 372903 - | GlpA1 TERM 390 373166 - 373150 - G 75 -8.7 -3.91144 | opp_overlap 373150 CGGACACTGCAGAAA GATCCCT GGC AGGGACC TTTGCCCATACGACT TERM 391 374840 - 374822 - g 80 -12.4 -3.3879 | opp_overlap 374821 374820, overlap 374820 AACGCAGGCGAAATA CGACGGGA GAT TCCCGCCG CCTTTATCCAGAACA HRM2_03230 374750 - 375127 + | hypothetical protein TERM 392 376084 - 376115 + G 70 -9.4 -3.61398 | gap 1, opp_overlap 376093 CATCATTACCTCCAA CCGCATCA-ACACCC CCG GGGTGGCTGAAGCGG TTCTTGCCCGGGGGG TERM 393 376929 - 376916 - g 76 -8.1 -4.18018 | CTGTTGCAGCGAAAA CCCAC AAAG GTGGG TTCCGGGCTGGGCAA fadH 375200 - 377236 + | FadH HRM2_03250 378289 - 377339 - | putative DNA-binding response regulator TERM 394 377717 - 377735 + g 84 -4.4 -5.28983 | overlap 377720 GATCAGCTGGTTCAT CACCTCCC TCA GGGCGATG TTTTTATCTTTTAAC gdhA1 379793 - 378444 - | GdhA1 ppsA1 382802 - 379797 - | PpsA1 TERM 395 380222 - 380239 + g 70 -9.8 -3.23447 | overlap 380220 TGATGGTGTCGACCT CCCGGG CAATCT CCCGGG TCTTATCCCCCTTGA TERM 396 380711 - 380727 + g 74 -3.5 -4.91852 | opp_overlap 380711 GGGTTGGAAAGTGAA GGGCCTC AGG GTAGCCC TTTGTTTTTAATGCG TERM 397 381913 - 381929 + g 73 -5 -4.66264 | overlap 381914 381915 TTATTAAGGAACGCC GCCGGG ATAAG CCGGGC TTTTTCGCGATTTTC TERM 398 382893 - 382875 - H 75 -3.1 -5.22006 | opp_overlap 382875 TGACCACAATAAAAA TGCTTAG TTTCT CTACGCA TTAATGTCTGGTACT TERM 399 383665 - 383647 - g 88 -3.8 -5.53288 | TGGAAGCCAAAAAAA TGACGG CAAAGCC CCGCCA GATCGAAAAACTGCA HRM2_03280 383223 - 384911 + | hypothetical protein (transmembrane family protein) TERM 400 385008 - 385026 + G 74 -7.4 -4.14874 | overlap 384997 CTGTCCTGGTATTAT TCCCAGGT TTT ACCTGGCA TTTTCCCGGTGTTCT HRM2_03290 384944 - 385183 + | hypothetical protein glgB1 385199 - 385489 + | GlgB1 HRM2_03310 385550 - 385966 + | putative response regulator protein (CheY-like receiver) TERM 401 386036 - 386046 + F 81 -5.4 -5.19251 | ACGCACGCTACACGG CGAT CAT ATCG TTTTTATTAATATTC argT 386245 - 386997 + | ArgT TERM 402 387006 - 387032 + F 100 -15.8 -5.43414 | opp_overlap 387006 GAAATAAATGAAAAA GGCGGGGGTGCC GTG GGTGTCCCCGCC TTTTTTGTGTCTGGT TERM 403 387032 - 387006 - f 100 -9.2 -5.13137 | opp_overlap 387006 GAAATAAATGAAAAA GGCGGGGGTGCC GTG GGTGTCCCCGCC TTTTTTGTGTCTGGT HRM2_03330 387055 - 387732 + | amino acid transport system, permease protein (HisMQ-family protein) TERM 404 387792 - 387770 - g 71 -7 -4.14392 | opp_overlap 387783, overlap 387771 CCTGAACGTTGAAAA CCTCACCAAA TCC TTTGGGGAGA CCCAGATTCTCAAGG glnQ1 387735 - 388499 + | GlnQ1 glnP1 388496 - 389161 + | GlnP1 TERM 405 389174 - 389162 - T 78 -10.5 -3.28712 | CCGGGTTTTGGATAA CCGGC ACG GCCGG AGCGAGGTATTTGCT TERM 406 389701 - 389689 - T 86 -10.5 -3.86524 | overlap 389690 AGAGTTTCTTATAAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 407 389727 - 389690 - T 73 -9.7 -2.91593 | overlap 389689 GAGTTTCTTATAAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATTTTGAAACACCT fdhD 390635 - 389811 - | FdhD fadD1 390900 - 392534 + | FadD1 TERM 408 392584 - 392536 - f 84 -11.2 -3.67954 | gap 1, overlap 392573 GAAAGAGACTTTAAA TGTTATCCGGGGCATTGATGCCC ATGC AAGAATCAATGCCCCGG-TAATA CCGGCAACTTTTAGG TERM 409 392698 - 392712 + F 79 -7.8 -4.4009 | GGTCTTGCCTTTACC CTCGTC TCT GGCGAG TTTTATGGCATGGGC colR 393696 - 394376 + | ColR colS 394373 - 395737 + | ColS HRM2_03420 396186 - 395785 - | putative acetyltransferase family protein (GNAT-family protein) TERM 410 397170 - 397186 + G 70 -8.7 -3.57144 | opp_overlap 397158 ACAGCGCAACAGTTG CGGCTCT GGC AGAGTCG TTTGGACGTGGCGCA TERM 411 398458 - 398440 - g 73 -10.2 -3.21218 | AGGGTCCATCACCAA CAGCGGCC GGT GGCAGCTG TGGCATTACCAGGCA fdhA2 396587 - 399640 + | FdhA2 fdhB2 399724 - 400473 + | FdhB2 TERM 412 400590 - 400567 - f 100 -18.2 -4.34488 | opp_overlap 400567 TACATTTATAAGAAA GCCGCTCCAC ATTT GTGGAGCGGC TTTTTCTGCCAAAGG TERM 413 400567 - 400590 + F 100 -18.2 -4.82901 | opp_overlap 400567 TACATTTATAAGAAA GCCGCTCCAC ATTT GTGGAGCGGC TTTTTCTGCCAAAGG TERM 414 400682 - 400666 - g 100 -7.9 -5.60993 | overlap 400679 CGGGGGATAAAAAAA GCCCTGG AGA CCATGGC CGGCAACCGACCGGA fdhE1 400615 - 401526 + | FdhE1 TERM 415 401656 - 401610 - T 89 -10.5 -3.96337 | gap 2, overlap 401614 401617 GTAAAAATTATGAAA GCAACTATCCCGTTATCGGACAT CTG ATGTCCGATAATGGGA-AATT-C AAGGGGATTTAAAGA TERM 416 401654 - 401614 - T 100 -12.7 -3.59836 | overlap 401610 401617 AAATTATGAAAGCAA CTATCCCGTTATCGGACAT CTG ATGTCCGATAATGGGAAAT TCAAGGGGATTTAAA TERM 417 401651 - 401617 - T 100 -18.8 -2.91027 | overlap 401614 401610 TTATGAAAGCAACTA TCCCGTTATCGGACAT CTG ATGTCCGATAATGGGA AATTCAAGGGGATTT HRM2_03460 402263 - 401715 - | hypothetical protein TERM 418 402271 - 402295 + r 71 -9.2 -2.91276 | opp_overlap 402272, overlap 402270 402283 GAGTTCATGAAGAAA AGCTCCGGGT GTTTG GCCCGGAGCC CTTTATAGGCGCAAG TERM 419 402294 - 402272 - R 100 -12 -4.71828 | opp_overlap 402271 402270 402283 AGTTCATGAAGAAAA GCTCCGGG TGTTTGG CCCGGAGC CCTTTATAGGCGCAA HRM2_03470 403411 - 402323 - | hypothetical protein TERM 420 402830 - 402851 + g 78 -3.5 -5.1356 | opp_overlap 402830 402831, overlap 402831 AACGGTTTCCTCAAA GGCCTGGGC GGCG GCCTTGGCA TTTTTCTTACTGGCC TERM 421 403102 - 403082 - G 83 -9.7 -4.12599 | AATAAGGGCCGAAAA TCCCACCAG GTA CTGGTTGGA ACCACGAATCGAGTC HRM2_03480 405342 - 403651 - | formylmethanofuran dehydrogenase/molybdopterin biosynthesis fusion protein TERM 422 404196 - 404224 + g 72 -3.8 -4.87389 | gap 1, opp_overlap 404187, overlap 404198 CAAGGATGGGTTCGT CGCCCAGAACGGC CATG GCC-TTCTGGAAG TTTGTTTTTGAAATA TERM 423 404954 - 404964 + g 76 -3.2 -5.07652 | AACCAGTTCATGATT TCCT GCC AGGG TTTTATTTTGGCAGG HRM2_03490 405710 - 405339 - | predicted molybdenum transport regulatory protein ModE (HTH domain/molybdenum-binding protein) ppsA2 408890 - 405897 - | PpsA2 TERM 424 409218 - 409191 - H 82 -3.2 -5.41746 | AATGGTTGAAAAAAA CGCCCTGGTCCT TTAT AGGCCCCAGCCG GGTAGCAAAAAAGCC TERM 425 409612 - 409630 + G 74 -11 -3.08211 | overlap 409610 TGGCCCACGTGGATT TTGGCCTG AAT CAGGCCAG TAATTTTCAAAGGCT TERM 426 409756 - 409742 - g 76 -5.8 -4.61231 | opp_overlap 409741 TTACAGCCCGAAAAA TAAGTA TTA TACTTA CATTGTTCGGCCTGA TERM 427 411008 - 411030 + G 95 -2.1 -5.86061 | gap 1, overlap 411011 TCCTTCCATCATCGA TTATTT-CGG AGAG CCGGAAATGA TTTTTTTTGATCCGG gdhA2 409302 - 412433 + | GdhA2 HRM2_03520 414324 - 412522 - | signal transduction family protein (GGDEF domain protein) TERM 428 412862 - 412872 + g 70 -2.4 -5.0133 | opp_overlap 412862 AAATTGGTCACCAAA GCGG ATG CCAC TTTTTTAAGGCACTC TERM 429 413055 - 413045 - G 73 -3.2 -5.00884 | AGTCCGGTCAAAAAA TCCG TTA CAGA AAGTTCCGCAAGTTT HRM2_03530 415600 - 414425 - | ABC-type transporter, substrate-binding protein TERM 430 415056 - 415041 - G 71 -6.1 -4.31698 | GGAAAGTAAAAAATA CCGAC CTTTTT GTCGG CGTGGTATATAGAGA TERM 431 415446 - 415419 - G 91 -12.8 -3.97636 | ATTCCAACTGAGAAA CTATTACCGACC ATGG GGCCGGCAATAG CAATTGTGACCGTGT TERM 432 415996 - 416012 + r 71 -8.7 -3.2592 | opp_overlap 415994 415992, overlap 415994 415992 GTTAGATAAAAGAGC GTACCGG TGA CTGGTAC TCTATTCGTTTCTGT HRM2_03540 416340 - 416014 - | ABC-type transporter, substrate-binding protein eutC 417149 - 416391 - | EutC eutB 418552 - 417146 - | EutB TERM 433 418118 - 418149 + g 74 -11 -3.08032 | gap 1, opp_overlap 418126, overlap 418114 GACGGTTTCAATCTT TCCAGCAACCAGGAT TAA ATCCTGGTTGC-GCA TGATTTTAGAAACCG TERM 434 418142 - 418126 - G 71 -10.9 -3.14881 | opp_overlap 418118 418114 CAATCTTTCCAGCAA CCAGGAT TAA ATCCTGG TTGCGCATGATTTTA HRM2_03570 418791 - 420422 + | hypothetical protein TERM 435 420481 - 420447 - T 100 -13.7 -3.3164 | gap 1, opp_overlap 420439 420445, overlap 420435 420438 420436 AAGGGATGGGCACAA CCGCCCTAT-CTGGTC TACT GACAAGGATAGGGCGG AATCTAATAAAATTA TERM 436 420521 - 420531 + T 74 -6.8 -4.26881 | GCTCAAACAAATTTT GCCT TCC AGGC TTTCATTTTCTCAGC HRM2_03580 421632 - 420508 - | NADH oxidase TERM 437 420700 - 420716 + g 86 -8 -4.65895 | overlap 420699 CCATAGTACACGCGC CAGACC GATCA GGTCTG TTTTTCCGTCGCGGA HRM2_03590 422295 - 421645 - | putative 3-demethylubiquinone-9 3-methyltransferase TERM 438 422169 - 422154 - G 88 -10.4 -4.2535 | overlap 422147 ATATTACACCGAAAA TCGGCC ATGC GGCCGA TGAAATTCCTAATTT HRM2_03600 424212 - 422563 - | putative aerobic respiration control sensor protein ArcB TERM 439 424315 - 424352 + r 73 -9.7 -2.91593 | overlap 424341 CGGCGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCATGCCG GTTTATAAGAAACTC TERM 440 424341 - 424353 + r 86 -10.5 -3.86346 | overlap 424315 GAGCCATACCTCGCT CCGGC CAT GCCGG TTTATAAGAAACTCG HRM2_03610 425806 - 424832 - | hypothetical protein TERM 441 424868 - 424880 + g 77 -10.5 -3.51633 | AGCAAATACCTCGCT CCGGC CGT GCCGG TTATATGGAATCTGT TERM 442 425655 - 425672 + g 71 -7.7 -4.11501 | overlap 425656 TCATAATGTTCATTT TCTCCTG TCAC CAGGAGG TTTGATTCTGTTTCC algI1 427562 - 425991 - | AlgI1 HRM2_03630 427920 - 429542 + | putative virulence factor (pectin lyase fold protein) TERM 443 429580 - 429614 + T 73 -8.4 -3.63394 | opp_overlap 429583, overlap 429574 429581 TGTATGTTTTTAGAA AAACAGGACTCCTCCC AAG GGGAGGAGTCCCGAGA TTGTCGTGTTTTATT TERM 444 429581 - 429613 + T 83 -11.9 -2.7641 | opp_overlap 429583, overlap 429580 429574 GTATGTTTTTAGAAA AACAGGACTCCTCCC AAG GGGAGGAGTCCCGAG ATTGTCGTGTTTTAT TERM 445 429611 - 429583 - T 100 -21.1 -4.83169 | opp_overlap 429581 429580 429574 ATGTTTTTAGAAAAA CAGGACTCCTCCC AAG GGGAGGAGTCCCG AGATTGTCGTGTTTT aldA 431061 - 429628 - | AldA TERM 446 431130 - 431118 - R 82 -7.7 -4.41348 | CGTGTTGCAAATAAA GCATG CGT CATGC CACTTAGGTAATGGT HRM2_03650 433304 - 431316 - | sigma-54 dependent signal transduction protein TERM 447 433474 - 433463 - R 78 -4.4 -5.08601 | TGAGCCGAACAAAAA TGCA ATAA TGCA AGCCTGACCCCCACG HRM2_03660 434098 - 433529 - | hypothetical protein TERM 448 434353 - 434372 + r 78 -4.2 -5.0925 | overlap 434350 CCGGAGTTATCTCCA CAACTGGG GTGG TCCTGTTG TTTTTACTTTTCAGG TERM 449 434636 - 434624 - R 78 -10.5 -3.2964 | overlap 434625 AAAGTTTTCTTATAA CCGGC ACG GCCGG AGCGAGTTATGGCTC TERM 450 434662 - 434625 - R 71 -9.7 -2.57463 | overlap 434624 AAGTTTTCTTATAAC CGGCACGGCCGGAGCGA GTTA TGGCTCCGGCCTCAACG AATTTTGAAACACCT HRM2_03670 435398 - 434808 - | hypothetical protein TERM 451 435093 - 435104 + g 74 -2.2 -5.1963 | overlap 435090 GGAATAATATTTGTG TAGG AACG CCTG TTTTTGTTCATTGAA TERM 452 435480 - 435462 - R 72 -7.6 -3.84825 | CGGATGCATATTAAA TCAAAAAA GTT TTTTTTGA AAGGCTTGCATGGCT HRM2_03680 435740 - 435462 - | hypothetical protein TERM 453 435982 - 435953 - H 83 -12.2 -2.72991 | overlap 435971 TCAGATTTTCAATCA GGGCAATCCTCA ACATGA TGGGGATTGCCC CGAGTTCACCCAGTT HRM2_03700 436218 - 436379 + | hypothetical protein ompA1 437493 - 436369 - | OmpA1 TERM 454 436412 - 436424 + g 76 -6.2 -4.63218 | CGTCTGTTCATTGCA CGGC CTTCA GCCG TTTTGTTGGACGCCA HRM2_03720 437842 - 437525 - | putative periplasmatic protein TERM 455 438107 - 438077 - R 100 -9.8 -5.00895 | TCCATCAGATAAAAA GGTCATATACAACC TTT GGTCATATATGGCC GGCTTTGTCACAGAC HRM2_03730 439358 - 438327 - | putative ABC-type transporter, multidrug permease component TERM 456 438571 - 438557 - G 70 -4.2 -4.60797 | opp_overlap 438570 GGGGTAGATAGAAAA TAACCC CTA GGGTTC TGGCCCCGGCCTGAC HRM2_03740 440035 - 439355 - | ABC-type transporter, ATP-binding protein TERM 457 439876 - 439861 - G 74 -4.6 -4.87665 | TGCCATCCACAAAAA CCTGCC CGCT GTCAGG GATGAGCCAGCCGGC TERM 458 440174 - 440134 - R 82 -10.4 -3.65812 | overlap 440135 GCTTCTTCAACATAA CCGGTATGGCCGGAGCAG GGTAT CTACTCTGGCCACAACGA ACGATGAAACGCCTC TERM 459 440173 - 440135 - R 81 -11.7 -2.79273 | overlap 440134 CTTCTTCAACATAAC CGGTATGGCCGGAGCAG GGTAT CTACTCTGGCCACAACG AACGATGAAACGCCT HRM2_03750 442095 - 440500 - | transposase (ISPsy5 family protein) TERM 460 440567 - 440593 + g 71 -7.2 -4.07568 | opp_overlap 440567 AACAAGGCTTTATAA TCTGCCTCAGTC ATG GCCTGGGGAAGA TTTTCAAAAAGGAAG TERM 461 441361 - 441373 + g 76 -6.3 -4.62471 | CTGGATTAATGGTCC CGAAA GGA TTTCG TTTTTGAGCATTGCA HRM2_03760 442493 - 442140 - | transposase protein HRM2_03770 442840 - 442493 - | hypothetical protein HRM2_03780 443559 - 443218 - | hypothetical protein HRM2_03790 445325 - 443844 - | sigma-54 dependent transcriptional activator (PAS/PAC domain protein) TERM 462 443912 - 443922 + g 70 -4.6 -4.60041 | overlap 443891 443919 TGAGACCGAGAATCT CGGC TGC GCTG TTTTTACCGCTGACT TERM 463 444314 - 444304 - G 71 -6.8 -4.12456 | opp_overlap 444305, overlap 444305 AGATCACTCCGAAAA CGTC CTT GACG GACTTCTTGTTCAAG TERM 464 446070 - 446050 - g 70 -2.6 -4.99643 | TATTAAAAAAAACAA TGGACA AATTCCCCA TGTCCA TAACGCCATACTACT TERM 465 446635 - 446607 - g 70 -9.6 -3.19936 | overlap 446611 AACCACCCAAGGGAA GTAACGGCATCC GCCAG GGACGCCCTTAC AAAACTTGCCAACGC kamA1 445872 - 447182 + | KamA1 HRM2_03810 448800 - 447445 - | hypothetical protein TERM 466 447531 - 447549 + g 82 -8 -4.56702 | overlap 447533 CATCGGCTGTGCTTT GTCGGCTG ACC CGGCCGCC TTTGTTTGATTGGCC TERM 467 449176 - 449161 - H 74 -4.6 -4.77925 | AAAAAATTGTAAAAA CCCACG AGAG CACGGG AGAAGGAATAGAGAA HRM2_03820 449250 - 449453 + | hypothetical protein HRM2_03830 450061 - 449705 - | hypothetical protein TERM 468 452318 - 452301 - g 78 -6.3 -4.86731 | TGGGTGTAAAGAAAA CCTCCAT CGTA ATGGAAG AACTGGGTTCTATAC HRM2_03840 450104 - 453040 + | putative DNA helicase (D10 protein) TERM 469 453257 - 453268 + F 75 -3 -5.10656 | GATCGGCTTTATTCT TTGA TCAG TCAA TTTTATTCTTTTCCT TERM 470 453584 - 453573 - f 75 -3 -5.14965 | ACCGTCATGAAAAAA TAAG GCTC CTTA AAATGTTCAGACTGT TERM 471 454363 - 454349 - g 86 -2.8 -5.56673 | ATTGACAAGAAAAAA TGGTTC TCG GAAACA TCTGCAAAATTCAGA HRM2_03850 453953 - 454711 + | putative ferric uptake regulation protein TERM 472 454753 - 454777 + F 75 -8.4 -3.86194 | opp_overlap 454753 AGGGCTATAGATTAA GGGCGACGGC CAAAA GCCGCCGCGC TTTATGCCAGCCGTT TERM 473 454777 - 454753 - f 86 -11.3 -3.322 | opp_overlap 454753 AGGGCTATAGATTAA GGGCGACGGCC AAA AGCCGCCGCGC TTTATGCCAGCCGTT HRM2_03860 454837 - 455964 + | putative 5-methylcytosine-specific restriction enzyme A umuD1 456512 - 456931 + | UmuD1 TERM 474 457342 - 457327 - g 83 -3.2 -5.42862 | opp_overlap 457327 ATACCGTGAAAAAAA TACCGG CATT CCTGTA TCCATTGGCATTGCA TERM 475 457416 - 457403 - g 76 -4.5 -5.055 | opp_overlap 457403 CGAATTGCCAAAAAA TCAGC CAAA GCCGA TGGTGTGCTGGATTT umuC2 457020 - 457433 + | UmuC2 umuC3 457460 - 457768 + | UmuC3 TERM 476 458083 - 458070 - g 87 -8.1 -4.7878 | overlap 458072 CATGGACAAAATAAA TGCCC GCAT GGGCA GCCACGCTGTCCGGT HRM2_03900 457810 - 458202 + | DNA-directed DNA polymerase HRM2_03910 458441 - 458689 + | predicted transglycosylase associated protein YeaQ HRM2_03920 458845 - 459384 + | hypothetical protein TERM 477 459410 - 459422 + T 74 -4.9 -4.82855 | GTTTTAAGTTTTGCT TGTAA AGA TTACA TTTTTCGATTTCCTG HRM2_03930 460297 - 459809 - | hypothetical protein HRM2_03940 460438 - 460809 + | FMN-binding protein TERM 478 460904 - 460880 - T 70 -2.7 -4.98436 | opp_overlap 460880, overlap 460882 CTAAGATTAGAAAAA GGCCTGTGGAC TAT GTCCATACGTC CACTCCCAAAATGCT TERM 479 460929 - 460957 + T 100 -16.1 -4.13014 | opp_overlap 460929 460916 AATGCTGGATTTAAA CCCCCAGACTATT ATT AAAAGTCTGGGGG TTTTCAAACTGTAAC TERM 480 460957 - 460929 - T 100 -16.1 -3.65199 | opp_overlap 460929, overlap 460916 AATGCTGGATTTAAA CCCCCAGACTATT ATT AAAAGTCTGGGGG TTTTCAAACTGTAAC TERM 481 461302 - 461317 + T 78 -10.4 -3.39327 | opp_overlap 461302 461303, overlap 461303 GGCTCAAAATAAAAA GGCCCT CCAA AGGGCC TTCTGCCTCTCGGAG TERM 482 461317 - 461302 - T 100 -10.4 -5.45802 | opp_overlap 461302 461303, overlap 461303 GGCTCAAAATAAAAA GGCCCT CCAA AGGGCC TTCTGCCTCTCGGAG TERM 483 461335 - 461303 - T 84 -9.8 -3.86397 | opp_overlap 461302 461303, overlap 461302 GCTCAAAATAAAAAG GCCCTCCAAAGGGC CTTCT GCCTCTCGGAGAGC TTTTATATATGGTGT TERM 484 461303 - 461335 + T 73 -5.4 -4.63586 | opp_overlap 461302 461303, overlap 461302 GCTCAAAATAAAAAG GCCCTCCAAAGGGC CTTCT GCCTCTCGGAGAGC TTTTATATATGGTGT HRM2_03960 461705 - 461493 - | hypothetical protein mltB 462609 - 461716 - | MltB TERM 485 463725 - 463747 + G 83 -9.8 -4.25104 | opp_overlap 463724 463727 ATCCTTGTTGAAATC CAGGGGCTTG CCT CAAGCTCCAG TTTTGGTACGCCCCG radA 462801 - 464162 + | RadA HRM2_03990 464183 - 464794 + | putative ribosomal RNA methyltransferase 1 (23S rRNA methylase) HRM2_04000 464807 - 465550 + | hypothetical protein TERM 486 465573 - 465600 + T 90 -11.4 -3.59315 | opp_overlap 465573 CCCTCCTGAATTATA CCACGGTTGA AGGGTCGA TCAACCGTGG TTTAGCCCTCATTGG TERM 487 465600 - 465573 - T 81 -11.4 -2.90075 | opp_overlap 465573 CCCTCCTGAATTATA CCACGGTTGA AGGGTCGA TCAACCGTGG TTTAGCCCTCATTGG HRM2_04010 466405 - 465602 - | outer membrane lipoprotein carrier protein precursor HRM2_04020 467891 - 466302 - | long-chain-fatty-acid--CoA ligase (Acetyl-coenzyme A synthetase) TERM 488 466623 - 466634 + gr 80 -4.4 -5.21709 | GTTTTCACCGCCGCA GATG ATGA CATC TTTTTTCCTGTCCAC TERM 489 466865 - 466877 + gr 73 -5.5 -4.68908 | CTGGAACACCGATGG CACCG ACC TGGTG TTTATTTTGAATGCC TERM 490 467936 - 467975 + r 76 -9.4 -3.54935 | opp_overlap 467941, overlap 467941 GAAGGTTGCGCTAAT AAAAATCCCACTGGGC AGTATAAA GCACAGTGGGATTTTA TTTCAAGGGGGTTTG TERM 491 467970 - 467941 - R 100 -9.3 -5.06414 | opp_overlap 467936 467941 TTGCGCTAATAAAAA TCCCACTGGGC AGTATAAA GCACAGTGGGA TTTTATTTCAAGGGG TERM 492 467941 - 467970 + r 100 -9.3 -4.86731 | opp_overlap 467941, overlap 467936 TTGCGCTAATAAAAA TCCCACTGGGC AGTATAAA GCACAGTGGGA TTTTATTTCAAGGGG dnaK1 469908 - 467995 - | DnaK1 TERM 493 468833 - 468843 + g 80 -4.6 -5.17353 | overlap 468824 TCGTCCGGGTTAACG CCCT TGT GGGG TTTTTTGCTGAATAT TERM 494 469704 - 469717 + g 76 -8.1 -4.15106 | CGATGAGGCGCTTTA CACCG AATA CGGTG TTTTCCGGGTTGGTG grpE 470528 - 469926 - | GrpE TERM 495 470427 - 470450 + g 100 -5.9 -5.97575 | CTGTTTGCAGGAGTT GGTGTCCGG ATTTTC CCTGGCACC TTTTTTTTCTGCCTT TERM 496 470706 - 470693 - R 73 -3.7 -4.96501 | GGGGATAAAAAGAAA CCCGG CTGA CCGTG GAGGTATCGGACACT HRM2_04050 472134 - 470938 - | hypothetical protein HRM2_04060 475508 - 472131 - | hypothetical protein TERM 497 474551 - 474567 + g 100 -8.7 -5.47914 | overlap 474543 TGTGGTCCAGGCGTT CCTGTTC CTG GAGCAGG TTTTTTATCCTTTTT TERM 498 474630 - 474649 + g 91 -7.8 -5.14563 | opp_overlap 474615, overlap 474624 GGGGGTCAGGGCCTC CCGGCATT CCCG AAGGCCGG TTTTTTCATCCAGGA TERM 499 474832 - 474851 + g 70 -8.6 -3.76402 | gap 1, opp_overlap 474832 TGCTCCCGAACAAAA TCCGTGAGG TTT CC-CACGGA TTTCATGGATACGGT TERM 500 474851 - 474832 - G 100 -10 -4.63218 | opp_overlap 474832 TGCTCCCGAACAAAA TCCGTGAG GTTT CCCACGGA TTTCATGGATACGGT TERM 501 474966 - 474980 + g 76 -4.2 -5.02074 | opp_overlap 474953, overlap 474953 474968 GATCTCCACACTGGA CAGCTT TTT AAGCCG TTTTTTCAGCCGTCC TERM 502 475455 - 475439 - G 82 -12.3 -3.57144 | TGCCCCAGTTGTAAA CCTCCAG GGT CTGGAGG CGGAATCCAGCCAGG HRM2_04070 476110 - 475508 - | hypothetical protein HRM2_04080 477565 - 476123 - | hypothetical protein TERM 503 477768 - 477781 + H 77 -3.9 -5.10064 | overlap 477760 TGGCTGAGGTCGAAG TATAG CGAC CTATA TTTTTGTATATTAAG TERM 504 478394 - 478405 + G 72 -3.6 -4.8622 | GGATCAGGGACGCAT CCGG AACG TCGG TTTTTCGTTCCACGG HRM2_04090 477963 - 479162 + | putative aldo/keto reductase HRM2_04100 480009 - 479263 - | hypothetical protein nifB1 481265 - 480030 - | NifB1 TERM 505 480269 - 480279 + g 71 -6.8 -4.18983 | opp_overlap 480266, overlap 480266 GCGTCTCCAAAAGGG TGGC ACA GCCA TTGTTATTTCTGTAA TERM 506 481348 - 481362 + H 77 -8.6 -4.05788 | opp_overlap 481353 TTTTTATACTGGGCT GCAAAG TTG CTTTGC TTTCATTTCGAAAAC TERM 507 481830 - 481843 + G 70 -3.1 -4.8236 | gap 1, overlap 481830 481831 ACACGATGCAATTGT G-GGCA TAT TGCCGC TTGTTTTTTTCCCTG TERM 508 481957 - 481945 - g 70 -4.8 -4.72272 | GTTGTCCAGGAAAAA CTGC TCGTG GCAG CATTGGGCCTGGCAA HRM2_04120 481657 - 482700 + | hypothetical protein TERM 509 483672 - 483685 + G 70 -8.1 -3.71552 | opp_overlap 483653, overlap 483654 483670 GCCGACTGCTGGCGG CAGGC AGCT GCCTG TTATCTTGCTGAAAT TERM 510 483735 - 483716 - g 73 -6.4 -4.47007 | TAAAAATGAAAATAA CCAGATTG TCAT CGATCTGG ACCAGATTCCAAGGA HRM2_04130 482769 - 484010 + | hypothetical protein HRM2_04140 484285 - 484007 - | putative ABC transporter, substrate-binding protein TERM 511 484336 - 484316 - H 79 -11.2 -3.18274 | TCCATTTTAACTCAA GGCCAGAA TGTTG TTCTGGCC ATAAAGGACACGGGT HRM2_04150 484370 - 484474 + | hypothetical protein HRM2_04160 484600 - 484917 + | hypothetical protein HRM2_04170 484999 - 485664 + | phosphoglycerate/bisphosphoglycerate mutase family protein TERM 512 485986 - 486011 + G 71 -6.1 -4.29176 | gap 1 CTGGTCCACCGTATC CCGGTG-CCTGA ATC TCAGGGCGGCGG TTTTGGATTGAATCT HRM2_04180 485671 - 486210 + | hypothetical protein HRM2_04190 486239 - 487135 + | putative ankyrin repeat protein TERM 513 487554 - 487543 - g 86 -3 -5.61596 | ATTTCGATAAAAAAA GAAA GCCG TTTC CGGAGATAATTGATA HRM2_04200 487263 - 488762 + | hypothetical protein TERM 514 488951 - 488941 - f 73 -5.4 -4.73388 | opp_overlap 488941, overlap 488943 AATTCCGATCAAAAA GACA AGG TGTC TTGATAATGTGTTAA HRM2_04210 488960 - 490300 + | hypothetical protein TERM 515 490886 - 490865 - g 70 -4.5 -4.69326 | ATATTGAATACAAAA TATCATCTG CAAA CAAACGATA ATTCCTGGGACATTC HRM2_04220 490685 - 491287 + | hypothetical protein HRM2_04230 491639 - 491391 - | putative transcriptional regulator TERM 516 491642 - 491600 - G 87 -7.8 -4.91109 | gap 2, opp_overlap 491578 491627, overlap 491605 TTTGCAGTACAAAAA CAGGATTGGCTGCCCACACC ACAGG GGCGTGGGCAATC-A-CCTG CCCACCTTCGCTGAT TERM 517 491848 - 491867 + H 74 -5 -4.89393 | GACGGCAGACTGGGA CAGGTTGA CCAG TTGACCTG TTTTTGTGAAATTTG TERM 518 491973 - 491949 - H 75 -7.3 -4.27443 | overlap 491946 TTATCATCAAAACAA TTCATTAGACA AAT TGTATAATGAA ACTTAAATTGTTGTT HRM2_04240 492021 - 492629 + | hypothetical protein TERM 519 492835 - 492825 - g 71 -5.4 -4.56597 | TCGCTCTTTCAAAAA TCTC ATG GAGA AAAAAGAATTATACC TERM 520 493147 - 493118 - g 84 -10.7 -4.08706 | GTCTTATCACAGAAA CCATGGAGCAAAG GGCT CCCGGCTCCATGG CCCTCGATGAGCGGA pflD1 492667 - 495033 + | PflD1 pflC1 495044 - 495952 + | PflC1 HRM2_04270 496132 - 495995 - | hypothetical protein HRM2_04280 496139 - 496378 + | putative 4-aminobutyrate aminotransferase TERM 521 496751 - 496763 + T 89 -10.5 -4.04206 | AGCCGATACTTCGCT CCGGC CGT GCCGG TTTATATGAAACTCG HRM2_04290 497881 - 497063 - | putative bifunctional enzyme ThiED (Thiamine-phosphate pyrophosphorylase / Phosphomethylpyrimidine kinase) HRM2_04300 498832 - 497894 - | ABC-type transporter, substrate-binding protein TERM 522 498452 - 498472 + g 71 -6.8 -4.15088 | GGTATATCCGATGTT CTTGCCGG ACAGG TCGGCAGG TGTTTTTATGGTTTT HRM2_04310 499610 - 498861 - | ABC-type transporter, permease protein TERM 523 499099 - 499083 - G 100 -9.3 -5.41143 | CAGGCCTGAAAAAAA CCGGGGC AGG GCCCAGG GCCAGTAGAGCATTC TERM 524 499149 - 499132 - G 74 -4.1 -5.00884 | gap 1 AGCTTCTGGAAAAAA CTGGCCCC CAT GAGGC-AG AACAATACCCTGAAT TERM 525 499339 - 499326 - G 80 -9.5 -3.9712 | GGAGGCCACCAGAAA GGGGG TCAG CCCCC GTTCAAGTCCAGGGA TERM 526 499393 - 499370 - G 82 -8.1 -4.49756 | TGGCAAACATGAAAA TGGCCAGGG GAATGG CCGTGGCCA GGGCAAGGCCGATGC HRM2_04320 500349 - 499597 - | ABC-type transporter, ATP-binding protein TERM 527 500355 - 500365 + H 85 -4 -5.46657 | CTTCAAACATGGTCG TTTC CTT GAAA TTTTTTATTAAAATG HRM2_04330 500637 - 500957 + | hypothetical protein HRM2_04340 501048 - 501356 + | predicted anti-sigma factor antagonist RsbV (Anti-anti-sigma-B factor) TERM 528 501535 - 501522 - g 74 -2.3 -5.11836 | AGAGTGAAAATAAAA GACAG TCCC CAGTC CCGGATAAACCGTTG HRM2_04350 501356 - 501706 + | hypothetical protein TERM 529 501835 - 501810 - f 100 -16.3 -4.57581 | opp_overlap 501810 ATCGGAAACAACAAA GGGTTTCAGCA GTTT TGCTGAAACCC TTTTTTAACAATGGT TERM 530 501810 - 501835 + F 100 -16.3 -5.03715 | opp_overlap 501810 ATCGGAAACAACAAA GGGTTTCAGCA GTTT TGCTGAAACCC TTTTTTAACAATGGT HRM2_04370 502294 - 503646 + | FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) clpP1 503701 - 504318 + | ClpP1 clpX1 504320 - 505576 + | ClpX1 TERM 531 506207 - 506245 + G 85 -7.4 -4.77036 | opp_overlap 506209, overlap 506209 AAGATCAGCGATAAA AAGCTGCTCCTTAATTGC ACA GACATTGAGGAGCGGCTC TTTTTGCTGGTGAAG TERM 532 506243 - 506209 - g 76 -5.6 -4.88736 | opp_overlap 506207 506209 GATCAGCGATAAAAA GCTGCTCCTTAATTGC ACA GACATTGAGGAGCGGC TCTTTTTGCTGGTGA TERM 533 506209 - 506243 + G 80 -10 -4.00443 | opp_overlap 506209, overlap 506207 GATCAGCGATAAAAA GCTGCTCCTTAATTGC ACA GACATTGAGGAGCGGC TCTTTTTGCTGGTGA lon1 505637 - 508003 + | Lon1 TERM 534 508250 - 508292 + T 100 -28.2 -3.88062 | opp_overlap 508253 508256, overlap 508253 508256 GTCGCTCCCGCCATT TAAGAAGGGCCTTTAATCTG GAT CAGATTAAAGGCCCTTCTTA TTTGGTATCGTATCT TERM 535 508289 - 508253 - T 100 -25.5 -3.05384 | opp_overlap 508250 508253 508256, overlap 508256 GCTCCCGCCATTTAA GAAGGGCCTTTAATCTG GAT CAGATTAAAGGCCCTTC TTATTTGGTATCGTA TERM 536 508253 - 508289 + T 100 -25.5 -4.05877 | opp_overlap 508253 508256, overlap 508250 508256 GCTCCCGCCATTTAA GAAGGGCCTTTAATCTG GAT CAGATTAAAGGCCCTTC TTATTTGGTATCGTA TERM 537 508256 - 508286 + T 100 -21.4 -4.1421 | opp_overlap 508253 508256, overlap 508253 508250 CCCGCCATTTAAGAA GGGCCTTTAATCTG GAT CAGATTAAAGGCCC TTCTTATTTGGTATC TERM 538 508286 - 508256 - T 100 -21.4 -3.67597 | opp_overlap 508256 508253 508250, overlap 508253 CCCGCCATTTAAGAA GGGCCTTTAATCTG GAT CAGATTAAAGGCCC TTCTTATTTGGTATC leuB 509382 - 508306 - | LeuB TERM 539 508920 - 508938 + g 70 -8.8 -3.63627 | overlap 508904 AGGCCTTTTCTGAAG GGCCGG TTCCCTC CCGGCC TTTGGGCTGTCCAAA sucC2 511544 - 509415 - | SucC2 TERM 540 509598 - 509617 + g 70 -4.2 -4.72272 | opp_overlap 509598 GTCCAGGATGACAGA TGACCGGG TCTC TCCGATCA TTTTTCGTGCCGAAG TERM 541 510635 - 510657 + g 70 -4.8 -4.72272 | overlap 510633 510633 510631 510638 CATGGCCGCCACCGT CGGCCAGG ATGGCCA CCTGGTTG TTTTTAATCGACGGC TERM 542 510638 - 510654 + g 71 -5.1 -4.47707 | overlap 510633 510633 510631 510635 GGCCGCCACCGTCGG CCAGG ATGGCCA CCTGG TTGTTTTTAATCGAC TERM 543 510824 - 510849 + g 82 -3.9 -5.23396 | overlap 510817 TGCCGGTGGCGGATC GCCCGCTTTTC AGAA GAACAATGGGC TTTTTCTTGGTTGTT TERM 544 510903 - 510926 + g 76 -5.2 -4.87803 | TCTTCCCTGGCTCAT TCCCTCCACA TACA TGAGGATGGA TTTTGTTTCGGGATC TERM 545 511094 - 511122 + g 72 -9.5 -3.41978 | overlap 511090 511089 511091 TCAGTGCGATTCCTC CCCTGGGGGCGTT TTT AATGCCCACAAGG TTCATGTTGCTCTTC HRM2_04450 512326 - 511544 - | Enoyl-CoA hydratase/carnithine racemase TERM 546 512091 - 512106 + g 71 -5.4 -4.50218 | gap 1 GATTCAAGATAGTGC CGGTAGG CTT CC-ACCG TTCTTTTTCCTGATT HRM2_04460 512565 - 512882 + | hypothetical protein TERM 547 512959 - 512923 - T 73 -7.3 -4.13767 | opp_overlap 512930, overlap 512930 GGGGGGAGTGGAAAA TATGAAAGGCAGAAGAG ACA CCCTTCTGCCTTTGGTG ACGTAAATTATGTGA TERM 548 512952 - 512930 - T 100 -14.2 -4.07678 | opp_overlap 512930, overlap 512923 GTGGAAAATATGAAA GGCAGAAGAG ACA CCCTTCTGCC TTTGGTGACGTAAAT TERM 549 512930 - 512952 + T 100 -12 -3.74872 | opp_overlap 512930 512923 GTGGAAAATATGAAA GGCAGAAGAG ACA CCCTTCTGCC TTTGGTGACGTAAAT cspL 513181 - 512981 - | CspL TERM 550 513310 - 513336 + r 100 -16.7 -3.15544 | opp_overlap 513310 GCAAGGGAAAAAAAA GGGGTTGTGGT AAAAA ACCACAACCCC TTGATGCAAATCAAA TERM 551 513336 - 513310 - R 100 -16.7 -5.86332 | opp_overlap 513310 GCAAGGGAAAAAAAA GGGGTTGTGGT AAAAA ACCACAACCCC TTGATGCAAATCAAA qmoC 514555 - 513380 - | QmoC qmoB 516927 - 514591 - | QmoB qmoA 518209 - 516935 - | QmoA TERM 552 517007 - 517046 + g 70 -4.2 -4.64598 | gap 1, opp_overlap 517006 517005, overlap 517007 GGATGTTACAACATC GGCAGGCTTGTTGGCA-CA GCC TGCTGCAAACATGCCGCCC TTTTTAAAGTCATTC TERM 553 517096 - 517070 - G 74 -6.7 -4.33417 | gap 2 GTCATTCACAATAAA GCCG-TCTGA-GT TGA ACGTCAGATCGGC ATTGGGCCGTTCAAC TERM 554 518282 - 518255 - R 72 -9.8 -2.85809 | opp_overlap 518254, overlap 518254 518258 AATATTATGAACAAT TTAGGATGCCGG GAAT CCGGCATCCTGC CTCCTTGAAAATTGA TERM 555 518279 - 518258 - R 100 -15.9 -2.67696 | opp_overlap 518254, overlap 518255 518254 ATTATGAACAATTTA GGATGCCGG GAAT CCGGCATCC TGCCTCCTTGAAAAT TERM 556 518445 - 518417 - R 100 -11 -5.11033 | opp_overlap 518439 CAGAATCTGAAAAAA CCTCCAGGCACA CAAAT CGCACCTGGAGG TCAGCTTTTCAGAAG aprA 520451 - 518490 - | AprA TERM 557 519414 - 519431 + g 71 -7.7 -4.11033 | gap 1, overlap 519417 TGAGGTTTTCATGAT GATGGGCC CGC GGCCC-TC TTTGTACTCTTTCAT TERM 558 519417 - 519429 + g 77 -10.5 -3.63897 | overlap 519414 GGTTTTCATGATGAT GGGCC CGC GGCCC TCTTTGTACTCTTTC TERM 559 519848 - 519864 + g 76 -4.4 -4.98255 | gap 1, opp_overlap 519840, overlap 519840 AACCAACGGCTCCAG CGA-CCC TTGT GGGATCG TTTTTGTCGTTGAGG aprB 520945 - 520508 - | AprB TERM 560 521064 - 521051 - H 77 -3.9 -5.10064 | overlap 521055 CCTAATATACAAAAA TATAG GTCG CTATA CTTCGACCTCGGTCA TERM 561 521886 - 521858 - g 79 -6.6 -4.60889 | overlap 521845 521860 AATGAGCCTGAAAAA CAGGATCATGCC CGGAC GGCTTGACCCAG TGGATGCTGACAGGT HRM2_04530 521346 - 522089 + | hypothetical protein TERM 562 522479 - 522507 + G 70 -4.5 -4.63527 | overlap 522477 AATGGCAACCACCCT CAGGGCCAAACGC TGG GTGTTTGATGCTG TTTTTCCCCTGCTGA TERM 563 522790 - 522774 - g 100 -13.7 -4.77438 | ACCGATGATGAAAAA CGGGCCA TCG TGGCCCG TACCCTGGTGGGTCG fabG3 522096 - 522950 + | FabG3 HRM2_04550 523582 - 523010 - | hypothetical protein HRM2_04560 524739 - 523615 - | hypothetical protein TERM 564 524713 - 524723 + g 70 -8.2 -3.66772 | GGTCTCCAGGTTTTC CGCC TTG GGCG TTATTGCAACTTTCA HRM2_04570 524950 - 525495 + | putative cytidine/deoxycytidylate deaminase infC 525534 - 526112 + | InfC TERM 565 526233 - 526266 + F 75 -7.3 -4.2757 | opp_overlap 526227 526231, overlap 526229 AAAAGATATGACAGG TGGTGCATCCGCCCC TTAA GGGAAGGCTGTACCA TTGTGTTTTTTTGGA rpmI 526308 - 526505 + | RpmI rplT 526532 - 526882 + | RplT pheS 526897 - 527913 + | PheS pheT 527915 - 530359 + | PheT TERM 566 530351 - 530362 + F 71 -4.4 -4.87291 | TTCAAGGCAGACCTC CCAT CCTG ATGG TTTTTGGTTGACATG TERM 567 530653 - 530640 - f 72 -9.5 -3.09516 | opp_overlap 530640 GTTTGCATCAGGGAA CGGGC ATTT GCCCG TTTTTCTATTTTTTA TERM 568 530640 - 530653 + F 100 -9.5 -5.41787 | opp_overlap 530640 GTTTGCATCAGGGAA CGGGC ATTT GCCCG TTTTTCTATTTTTTA HRM2_04640 530718 - 531185 + | hypothetical protein TERM 569 531330 - 531320 - g 80 -2.4 -5.4505 | GCCGCCAAGAAAAAA CTGG GAA CCCG GGCTGACATTGAAGT nusA 531203 - 532651 + | NusA TERM 570 532679 - 532731 + F 73 -5.7 -4.56597 | GATAACTATATAATG CCGGCATTTACCTTGGCC-CACC CGTTTTGAT GGTGTGGCCA-GTTAGATGACGG TTTTTAACAAACAGA TERM 571 533479 - 533469 - g 83 -5.4 -5.06414 | GCTTTGGAAGAAAAA TCTG AAA CAGA TGAAAAGGCTTTAGA TERM 572 533607 - 533591 - g 76 -4.3 -4.93296 | TGATGACGATAAAAA CCTAGAC ACG GCCGAGG CAAAGGACAAAAAAC TERM 573 533656 - 533636 - g 100 -9.1 -5.63236 | ACGGAAAAAGAAAAA GGTTCAAAA ACG TTCTGAACC GGCTAAGATAATTAA TERM 574 533791 - 533769 - g 70 -9.1 -3.60475 | overlap 533780 533781 AAGGTCCATCCCAAA CCGGCAGAC AAGGG GCCTGCCAG GGCCCAGGCCCATAG TERM 575 534482 - 534471 - g 100 -4.4 -5.88197 | opp_overlap 534471 GTAAAGACAAAAAAA GGTA CCAT TACC TTCCTTGACACACCC TERM 576 535232 - 535221 - g 76 -5.8 -4.5954 | opp_overlap 535221 535220 GCAGACGAGATAAAA GAGC TTAA GCTC ATTATCAAGGCCGAT infB 532773 - 535847 + | InfB rbfA 535844 - 536203 + | RbfA TERM 577 536310 - 536296 - g 95 -5.6 -5.53288 | opp_overlap 536308, overlap 536297 TTGAATGTAAAAAAA GCCGGT CAT ACCGGA ACCCTGGATCCCTTT TERM 578 536309 - 536297 - g 75 -9.1 -3.90888 | opp_overlap 536308, overlap 536296 TGAATGTAAAAAAAG CCGGT CAT ACCGG AACCCTGGATCCCTT truB 536203 - 537111 + | TruB TERM 579 537208 - 537227 + F 78 -5.6 -4.86861 | opp_overlap 537207 CATTCTTAAGTTAAC GTCCCATG AGAA CGGGGGAC TTTATTTGTTTATTC rpsO 537262 - 537531 + | RpsO TERM 580 537537 - 537571 + F 78 -9.9 -3.53012 | opp_overlap 537538 537542, overlap 537538 537542 GAGGCGATAGATTCA ACGAACCGGCCTTCC ATTCG GGGGGGCCGGTTCCA TTTAACCCACAGGCG TERM 581 537538 - 537570 + F 93 -13.4 -2.71712 | opp_overlap 537538 537542, overlap 537537 537542 AGGCGATAGATTCAA CGAACCGGCCTTCC ATTCG GGGGGGCCGGTTCC ATTTAACCCACAGGC TERM 582 537542 - 537566 + F 100 -12.8 -3.27525 | opp_overlap 537538 537542, overlap 537538 537537 GATAGATTCAACGAA CCGGCCTTCC ATTCG GGGGGGCCGG TTCCATTTAACCCAC TERM 583 537611 - 537669 + F 80 -9.8 -3.59202 | opp_overlap 537615, overlap 537615 537617 TGGCAGATACCTGAA TAAGTTCGCATATGCAGCATAAAAACCG ATT TGATTTTTATGCTGGAGGTGCGGGTTTA TTCTGTATGAAGATG TERM 584 537615 - 537665 + F 87 -8.4 -4.42974 | opp_overlap 537615, overlap 537611 537617 AGATACCTGAATAAG TTCGCATATGCAGCATAAAAACCG ATT TGATTTTTATGCTGGAGGTGCGGG TTTATTCTGTATGAA TERM 585 537617 - 537663 + F 76 -11 -2.54314 | opp_overlap 537615, overlap 537615 537611 ATACCTGAATAAGTT CGCATATGCAGCATAAAAACCG ATT TGATTTTTATGCTGGAGGTGCG GGTTTATTCTGTATG TERM 586 537992 - 537979 - g 71 -6.7 -4.21922 | opp_overlap 537978 CCAGTGAAAAGGAAA CCTTG ACAG CAAGG CTCATTGACCGGCCC TERM 587 538316 - 538328 + G 73 -3.3 -5.03314 | overlap 538315 TTCCGAGGCTGATAT GCTCG AAG CGATC TTTTTTGGCCATCAA pnpA 537717 - 539804 + | PnpA TERM 588 539805 - 539861 + F 78 -5.3 -4.96848 | gap 3, opp_overlap 539805 539804, overlap 539806 539809 GAAGAAGAAAAATAG TGGA-TTCCCCCTGCTTATCCATCTGCC CCCT GGCAAGTGGC-A-GCAGGGGGAACTCTG TTTTTGTGTCGGGAG TERM 589 539806 - 539859 + F 79 -8.2 -4.11141 | gap 2, opp_overlap 539805 539804, overlap 539805 539809 AAGAAGAAAAATAGT GGATTCCCCCTGCTTATCCATCTGCC CCCT GGCAAGTGGC-A-GCAGGGGGAACTC TGTTTTTGTGTCGGG TERM 590 539809 - 539856 + F 77 -10.7 -2.77484 | gap 2, opp_overlap 539805 539804, overlap 539806 539805 AAGAAAAATAGTGGA TTCCCCCTGCTTATCCATCTGCC CCCT GGCAAGTGGC-A-GCAGGGGGAA CTCTGTTTTTGTGTC TERM 591 540523 - 540490 - g 74 -8.1 -4.11371 | gap 1, overlap 540481 540480 CAATACGCCTGAAAA GGCACTCCAGGCCATG CAC CA-GGCCCTGAACGCC TCGTGTGTAACGGTT HRM2_04710 539867 - 540583 + | hypothetical protein HRM2_04720 542805 - 540589 - | poly(3-hydroxyalkanoate) synthetase TERM 592 541332 - 541344 + g 71 -7.7 -4.07687 | opp_overlap 541332 541331 ATTCTGCGGAAAAAG GCGTT GTG AACGC TTTTACCCAGGGGCT HRM2_04730 543390 - 542878 - | hypothetical protein HRM2_04740 543413 - 544063 + | hypothetical protein HRM2_04750 545190 - 544126 - | putative diguanylate cyclase (GGDEF domain protein) HRM2_04760 545945 - 545367 - | hypothetical protein TERM 593 546288 - 546266 - g 78 -13.4 -2.59431 | opp_overlap 546266, overlap 546262 TGCGGGTAGAACCCA GGCGGACCAC CTT GTGGTCAGCC TTTTTGTCAACCCGA TERM 594 546266 - 546288 + G 100 -13.4 -4.82901 | opp_overlap 546266 546262 TGCGGGTAGAACCCA GGCGGACCAC CTT GTGGTCAGCC TTTTTGTCAACCCGA panC 546126 - 546977 + | PanC HRM2_04780 547815 - 546958 - | hypothetical protein HRM2_04790 548590 - 547793 - | HD domain protein mobB 549104 - 548598 - | MobB TERM 595 549184 - 549170 - H 73 -8.6 -3.71156 | opp_overlap 549170 549169 549172 AAAGTCAAGACACAA CACCAT GGC ATGGTG ATTTACGTTCAAGTA aroK 549236 - 549757 + | AroK moeA 549769 - 550674 + | MoeA alr 551825 - 550662 - | Alr TERM 596 550768 - 550803 + g 71 -10.4 -3.05596 | gap 1, overlap 550795 GTGATACGTTGATTC GCCTGGGTGCCGAGG ATAACCA CCTCGTC-CCCGGGC TTGACTCCGGGAATC pflA 552542 - 551835 - | PflA TERM 597 552491 - 552459 - G 77 -9.2 -4.04474 | gap 1 ATAGGGGCAGACAAA GTTGCAGCCGGTCGT AAAT ACCACCGAC-GCAAC AAGGCCTGGAAAGTC nrdD 554636 - 552546 - | NrdD TERM 598 553399 - 553389 - G 76 -8.2 -4.15044 | CGTTTCTGCAATAAA CCCG ATC CGGG GCAGGTTCAGGGTGA TERM 599 553859 - 553846 - G 74 -8.1 -4.08064 | opp_overlap 553845 AACGGGGTCTGAAAA CCCAC CCGG GTGGG AATGTTGATGTTGAA HRM2_04860 555609 - 555040 - | hypothetical protein TERM 600 555983 - 555995 + r 78 -10.5 -3.2963 | AGCCCATACCCCGCT CCGGC CAT GCCGG TTATAAGAAACTCCT HRM2_04870 556559 - 556362 - | hypothetical protein aor2 558697 - 556556 - | Aor2 TERM 601 557605 - 557580 - G 76 -3.4 -5.1861 | overlap 557592 557593 557596 TCCAGGATGAAAAAA GGATCAAA AATACCAAGG TTTGATCC ACACCCTGCAATGGT TERM 602 557870 - 557854 - G 79 -12.3 -3.31792 | TCATGATGGGTACAA GGTGGGT GGT ACCCACC AGGGCCATGCGGTTT TERM 603 558000 - 557980 - G 82 -11.1 -3.70902 | opp_overlap 557993 TGCTGGACAGCGAAA TGGTGCCCC ACC GGGCCACCA CGGCCTTGACTTTTT soxB1 559871 - 558714 - | SoxB1 soxA1 561948 - 559864 - | SoxA1 TERM 604 560022 - 559992 - G 73 -11.9 -2.63112 | gap 1 AAATCCCCCACACCA TGGGCCTGCAGGTT TTTG AACC-GCAGGCCCC CATGCCGGTCCGGTT TERM 605 560227 - 560262 + g 91 -6.9 -5.14563 | gap 1 GGCTGTTTCTTTGTC GAGTTTCACCTGGACC AGCAG GGTGCCGG-GAAACTC TTTTTTGCTCAGCAC TERM 606 562034 - 562019 - R 86 -10.4 -3.86524 | opp_overlap 562018 562017, overlap 562007 ATACGCCTTTATAAA GGGGAG TTGC CTCCCC GGTTGTTCGTCAATC livF2 562778 - 562062 - | LivF2 TERM 607 562376 - 562388 + g 91 -9.1 -4.86731 | CCCCGGACAGCGTGC CGGCA AGC TGCCG TTTTCTTTCGGCAAG TERM 608 562425 - 562415 - G 76 -6.8 -4.58283 | CAAGTCTGGGAAAAA GGTC ATA GACC CAGGCAAGGATCTTT TERM 609 562740 - 562751 + g 71 -5.8 -4.41047 | overlap 562732 AATGCTGCCGTAGGA GACC CTGA GGTC TTTTACTTCAAACAT livG2 563544 - 562771 - | LivG2 livM2 564495 - 563548 - | LivM2 TERM 610 564004 - 563983 - G 70 -2.9 -4.77036 | overlap 563984 TGCCATGATGAAAAA GGTGAGGAT CAGC ACCCCCACT CCCAGGTAGTAGATG livH2 565394 - 564492 - | LivH2 livJ2 566618 - 565482 - | LivJ2 HRM2_04960 567416 - 566643 - | transcriptional regulator (GntR-family protein) TERM 611 567363 - 567375 + g 90 -6.3 -5.2696 | ATTAACCACGTCCTG GAACA CCC TGTTC TTTTTTGCCTTTTGA HRM2_04970 567607 - 567906 + | hypothetical protein divIVA 567926 - 568426 + | DivIVA TERM 612 569470 - 569458 - g 80 -3.3 -5.252 | CAGCTCTACAAAAAA GGATG GAT CAGCC CGGACGAGGCCTATG pilT1 568474 - 569556 + | PilT1 pilT2 569585 - 570748 + | PilT2 TERM 613 570971 - 570955 - g 74 -6.6 -4.29106 | overlap 570962 GTGGATAGCAACAAA CAGACA TCCCT TGTCTG CATGGGCAGTGGGGC HRM2_05010 570748 - 571368 + | hypothetical protein TERM 614 572366 - 572385 + G 71 -5 -4.56597 | gap 1 GAAACGTTACCTCGG GTCCA-GGC CAG GTCATGGAC TTTTTCAACGGGGCC HRM2_05020 571372 - 573234 + | putative 4-hydroxybutyrate CoA-transferase HRM2_05030 574013 - 573225 - | hypothetical protein HRM2_05040 574976 - 574023 - | hypothetical protein TERM 615 574361 - 574371 + g 89 -2.4 -5.75945 | overlap 574366 TTGACGGGGAAAGGT CCAG GGG CAGG TTTTTTTTAAAACCT TERM 616 574366 - 574389 + g 70 -8.2 -3.79043 | overlap 574361 GGGGAAAGGTCCAGG GGCAGGTTTT TTTT AAAACCTTCC TTTGCATTGGTGATG folP 575857 - 574976 - | FolP TERM 617 575678 - 575658 - G 79 -8.9 -4.26344 | opp_overlap 575657, overlap 575659 ACAGGTGTAGCAAAA GGGCGGGAA GAT TCCCCGCCG ATGTCTATAATGTCT TERM 618 575677 - 575659 - G 77 -12.4 -3.15324 | opp_overlap 575657, overlap 575658 CAGGTGTAGCAAAAG GGCGGGAA GAT TCCCCGCC GATGTCTATAATGTC ftsH 577862 - 575850 - | FtsH TERM 619 576599 - 576625 + g 100 -7.3 -5.67967 | gap 1, overlap 576601 576602 GTCTTGCCACTAGGG CA-TGGCCTGCC TCGT GGTAGGCCGTTG TTTTTTTCTCGTCCT TERM 620 576601 - 576622 + g 100 -10.1 -4.9041 | overlap 576599 576602 CTTGCCACTAGGGCA TGGCCTGCC TCGT GGTAGGCCG TTGTTTTTTTCTCGT TERM 621 576602 - 576621 + g 79 -11.4 -3.51806 | overlap 576601 576599 TTGCCACTAGGGCAT GGCCTGCC TCGT GGTAGGCC GTTGTTTTTTTCTCG HRM2_05070 579022 - 577934 - | tRNA(Ile)-lysidine synthetase-like protein TERM 622 579010 - 579021 + g 70 -4.4 -4.67635 | ATGGAGTTCTCTTGG TGCT GGTG AGCA TTTTGTCGTTTTACC HRM2_05080 579398 - 580315 + | hypothetical protein TERM 623 580327 - 580365 + T 78 -8.8 -3.76224 | TTAAGTTTCCATATT CGTTACGGCCAGGG CAGATATTGCA CCCTGGCCGTCCCG TTTAATAGATCACCC ugpC 581464 - 580367 - | UgpC ugpB 581726 - 583054 + | UgpB TERM 624 583126 - 583068 - f 70 -5.4 -4.44301 | gap 3, opp_overlap 583072 583075 583082, overlap 583069 583075 AGCGAAAATAAATAA GGATCAACCCAAAACGCCCTGTTCTTCCC GGTT GGGGGG--CAGGGGGTTTTGGGTTG-TCT TGCATCCATGATTAA TERM 625 583125 - 583069 - f 71 -8.9 -3.24954 | gap 3, opp_overlap 583072 583075 583082, overlap 583068 583075 GCGAAAATAAATAAG GATCAACCCAAAACGCCCTGTTCTTCCC GGTT GGGGGG--CAGGGGGTTTTGGGTTG-TC TTGCATCCATGATTA TERM 626 583072 - 583123 + F 100 -18.9 -3.10056 | opp_overlap 583069 583068 583075, overlap 583075 583082 AAAATAAATAAGGAT CAACCCAAAACGCCCTGTTCTTC CCGGTT GGGGGGCAGGGGGTTTTGGGTTG TCTTGCATCCATGAT TERM 627 583075 - 583120 + F 100 -14.8 -3.69256 | opp_overlap 583075 583069 583068, overlap 583072 583082 ATAAATAAGGATCAA CCCAAAACGCCCTGTTCTTC CCGGTT GGGGGGCAGGGGGTTTTGGG TTGTCTTGCATCCAT ugpA 583134 - 584024 + | UgpA TERM 628 584278 - 584315 + G 76 -8.6 -4.15998 | gap 1, opp_overlap 584287 CTCGGGGATCACCGT TGGAAAGATCGCC-ATC TCCAT GATCGGCGCTTTTTCCA TTGTTTACTTTGACT TERM 629 584641 - 584662 + G 76 -4.3 -5.01732 | gap 1, opp_overlap 584640 CGAGGCGGCCAAGAT GGACG-GGGC ATC GCCCATGACC TTTTTTCGAAAGATT ugpE 584030 - 584950 + | UgpE HRM2_05130 585651 - 584953 - | hypothetical protein HRM2_05140 586095 - 585670 - | hypothetical protein TERM 630 585757 - 585775 + g 72 -3.8 -4.78752 | overlap 585767 CTTGTCATCTTCGGC CGTTGTGG TCC CCATGATG TTTTTGGGTTCTGAT HRM2_05150 587783 - 586113 - | Na / Phosphate-cotransporter family protein HRM2_05160 589210 - 587861 - | putative methyltransferase TERM 631 588500 - 588472 - G 76 -11.7 -3.02263 | AGATTTCCTGGAAGA CCGATTCCGGTGA CCT TCTTCGGAATCGG GGCTCAAGGTAGGAT TERM 632 588549 - 588539 - G 70 -8.2 -3.65351 | GTATTCGCAGGCAAA GGGG CAT CCCC TGGTGGTGAGGATGG HRM2_05170 589670 - 589203 - | putative HTH-type transcriptional regulator HRM2_05180 590893 - 589745 - | putative translation initiation factor eIF-2B alpha subunit TERM 633 590232 - 590256 + g 80 -10.7 -3.72893 | TCCCAGGCCGTGAGC CTTGATCCCTG GTT CAGGGGTCGGG TTTCGTCAACCCATA TERM 634 590680 - 590666 - G 75 -9.2 -3.88498 | overlap 590661 TGTGTACACACCAAA GGCGCC TGT GGCACC GATCAGGGGTGCTCC HRM2_05190 591068 - 591814 + | 5'-methylthioadenosine phosphorylase (5- methylthioadenosine phosphorylase) (MTA phosphorylase) (MTAPase) TERM 635 592112 - 592102 - g 95 -5.4 -5.60993 | CCGGTCAGAAAAAAA GGAA AGC TTCC CTATAAAACCATCAG apt1 591823 - 592383 + | Apt1 HRM2_05210 593289 - 592390 - | hypothetical protein murI 594291 - 593440 - | MurI TERM 636 594229 - 594219 - G 87 -8.2 -4.87291 | overlap 594220 CACCCGAATCAAAAA CCCC CAG GGGG GCATCGTTTGACCGG epd 594632 - 595699 + | Epd HRM2_05240 595790 - 596398 + | transcriptional regulator (LuxR family protein) TERM 637 597016 - 597001 - g 77 -11.8 -3.17222 | opp_overlap 596997 597010, overlap 596997 596990 GAAATGATCAACACA CGGGCC ATGG GGCCCG GCGTTATCGGGTGTG TERM 638 597149 - 597166 + G 70 -4.7 -4.63089 | overlap 597156 ATCAACAGGCCCTGA CCGGATG CAAT CGACCGG TTGTTTTTTGCCATA TERM 639 597156 - 597169 + G 73 -3.1 -5.0538 | overlap 597149 GGCCCTGACCGGATG CAATC GACC GGTTG TTTTTTGCCATACCC TERM 640 597498 - 597512 + G 71 -5.6 -4.57569 | opp_overlap 597477, overlap 597481 597480 597510 CAGCCAGGAGGCCCT GGCCGA AAT TCTGCC TTTTTCCACCCATGG HRM2_05250 596443 - 597666 + | hypothetical protein TERM 641 598061 - 598079 + G 70 -8.8 -3.5489 | overlap 598056 598062 AGGCCCAGGGTGAAG TGCGTGCC ATC GGCATGCG TTCGTTTGAGATTGT TERM 642 598166 - 598196 + G 70 -2.5 -4.99035 | gap 1 TGTTTAATGCCAATG GCGGCTCCCGCA ACCTCCAG TGCGCG-GCTGC TTTTTATCTCAATCC TERM 643 598347 - 598364 + G 70 -11.3 -2.55074 | CCGGCTGAAGGCGTA TCCCGTG GATC CACGGGA TCAGTTCAGGTTCAC mscC1 597679 - 598479 + | MscC1 TERM 644 598623 - 598589 - T 100 -9.9 -4.56775 | overlap 598590 598591 ATGTCTTCTTAAAAA TTGCCGGGGACAGAT GTCAT ACCTGCCCCCGGCGG TCAAACCTTTTTTTA TERM 645 598622 - 598590 - T 100 -13.4 -3.33744 | overlap 598589 598591 TGTCTTCTTAAAAAT TGCCGGGGACAGAT GTCAT ACCTGCCCCCGGCG GTCAAACCTTTTTTT TERM 646 598621 - 598591 - T 100 -16.9 -2.60032 | overlap 598590 598589 GTCTTCTTAAAAATT GCCGGGGACAGAT GTCAT ACCTGCCCCCGGC GGTCAAACCTTTTTT aor3 600363 - 598636 - | Aor3 rtcB 601595 - 600396 - | RtcB TERM 647 600751 - 600761 + g 71 -6.8 -4.18197 | overlap 600748 ACTCCCCTGTCTGCG GGAG TCG CTCC TTTTCGGTGAACAAT HRM2_05290 602041 - 602283 + | putative 2'-5' RNA ligase HRM2_05300 604080 - 602284 - | hypothetical protein TERM 648 603425 - 603414 - G 70 -4.4 -4.65895 | opp_overlap 603414 TGCCGCAGTTAAAAA CAGA GGGC TCTG TTCTGTGGGGAAGCG TERM 649 604619 - 604647 + H 73 -8.2 -3.63241 | gap 1, overlap 604617 CTATTCCTCCCCTGA TGTCCAC-GGTTG GGGG CATCCCGTGGACA TATTTATAATTGCTG HRM2_05310 604738 - 605205 + | hypothetical protein TERM 650 605208 - 605246 + T 70 -9.5 -2.79289 | overlap 605207 CTATCGGGGATGATG TGGTGTGACCGGAGCAG ATACC CTGCTCCGGCCATGGCG GTTATTCGGGTAGTA uraA 606486 - 605248 - | UraA upp 607151 - 606525 - | Upp TERM 651 607496 - 607473 - g 83 -8.9 -4.29845 | opp_overlap 607481 GAATTTAAGGCAAAA CCCATCCAG GGACTT CTGGATGAG GCCCCCCTTTTTCCT TERM 652 607668 - 607698 + G 72 -9.7 -3.42583 | CCTGACCTGCCTGAC CTGCCTGATCTCT CGCCC AGAGAACAGGCCG TTGTGGATCTGTTGA TERM 653 609653 - 609616 - g 77 -9.1 -4.08394 | gap 1, opp_overlap 609628 609629, overlap 609617 AGATCCTGTTGAAAA GTCCCCGGGCAACCCTGT TGA ACAGGCTTGTCCGGGC-C ATGCTGGCCGAGAAA priA 607284 - 609731 + | PriA TERM 654 609754 - 609772 + F 81 -9.6 -3.90318 | ACGAAAACTCACCCA TTTGCGGC GTT GCTGCAAA TTTCTGAAATCCTCA TERM 655 609773 - 609816 + F 71 -4.6 -4.62471 | opp_overlap 609773 CGGCGTTGCTGCAAA TTTCTGAAATCCTCACGTAC AGTA GTACGCTCCGGTTTCAGAAA TTTTTGCGCCTTGCA TERM 656 610282 - 610311 + G 90 -5.7 -5.32599 | gap 1, overlap 610283 AAAGGTTTCTTTGCA TCCG-CACCGGTAT CTT ATGCGGGTGACGGG TTTTTCTATTTTGTA HRM2_05350 609844 - 610419 + | hypothetical protein TERM 657 612071 - 612082 + G 74 -7.2 -4.1347 | GGCTTGAGGTGGAAC GGGC CTAT GCCC TTTATCTCCTTGAAA ntrC1 610654 - 612201 + | NtrC1 ybaK 612669 - 612202 - | YbaK TERM 658 613089 - 613064 - H 93 -8.9 -4.56597 | opp_overlap 613064 TCCTTTTCTTAAAAA GGCCGGCCAAA ACCC TTGGGCTGGCC TTTTTAAGTTGTGCC TERM 659 613064 - 613089 + H 100 -11.1 -4.78149 | opp_overlap 613064 TCCTTTTCTTAAAAA GGCCGGCCAAA ACCC TTGGGCTGGCC TTTTTAAGTTGTGCC TERM 660 613569 - 613584 + G 73 -3.2 -5.02074 | overlap 613570 ATGGGGCTTGTGGAT GCCGTT AATA AACGGG TTTTTTCAACGGTGG TERM 661 614804 - 614844 + G 82 -12.5 -3.48276 | opp_overlap 614792 614798 614796 614794 CAAGACAGAGGCGGG CCTTGTCCGCCTGGGCG TCAAATC CGCCCAGGAGGTTGAGG TTGTGTACGCCGAGC TERM 662 615212 - 615176 - g 100 -13.2 -4.19746 | gap 1 GGGACTTGAAAACAA GAGAATCAGGGAGATTG ATAT CAATC-CCCTGATCCCC ATGGATGGTATGCCC sucC3 613170 - 615263 + | SucC3 aapP1 616036 - 615266 - | AapP1 aapM 617182 - 616088 - | AapM TERM 663 616215 - 616197 - G 71 -10.3 -3.04398 | overlap 616196 GCCTCGGCCGAAAAG CCCATCC ACTGG GGATGGG ACAGGGTGGTCTGGG TERM 664 616557 - 616582 + g 81 -13.3 -3.15999 | opp_overlap 616546 616553 616550 GACATGAACAGCAGG CTGATCAGGGG GACT CCCCGGATCAG TTCGATGTATACCAC aapQ 618385 - 617213 - | AapQ TERM 665 617376 - 617364 - G 71 -5.5 -4.57474 | GCAACGGATACAAAA TCAGG ATA CCCGA TGGCAACGGCCAGGG TERM 666 617926 - 617900 - G 71 -7.4 -4.03234 | gap 1 TCGGTTGCAGAGAAA CAGG-CCTGAA AAAGGG TTCAGGGCCTG GCGTGGGGAGGGCAG TERM 667 618356 - 618334 - G 84 -10.7 -3.96705 | opp_overlap 618332, overlap 618330 618329 GGTATAAAATCGAAA GTTTTTCCG GATCG CGGAAAAAC GGAATTTTTTCTGGG TERM 668 618395 - 618452 + r 100 -5.6 -5.84381 | gap 3, opp_overlap 618408, overlap 618396 TTCCATGGGACCCTT TCG-CT-AT-GCAGAACCCGGGACCTGCA AGT TGCTGGTCCCGGGCACTGCGATCATACGG TTTTTTTATTCCTGG TERM 669 618396 - 618451 + r 71 -6.9 -4.09002 | gap 3, opp_overlap 618408, overlap 618395 TCCATGGGACCCTTT CG-CT-AT-GCAGAACCCGGGACCTGCA AGT TGCTGGTCCCGGGCACTGCGATCATACG GTTTTTTTATTCCTG TERM 670 618436 - 618408 - R 100 -20.3 -3.35679 | opp_overlap 618396 618395 TTTCGCTATGCAGAA CCCGGGACCTGCA AGT TGCTGGTCCCGGG CACTGCGATCATACG aapJ2 619135 - 618476 - | AapJ2 TERM 671 618814 - 618826 + g 70 -9.1 -3.58522 | opp_overlap 618813 CGTGGCGGACAGCAG GAGCC AGT GGCTC TTTGGAAATGATGGT aapJ1 619495 - 619136 - | AapJ1 TERM 672 619643 - 619629 - H 74 -7.8 -4.00756 | opp_overlap 619629 619636 TATTGCAGTAAACAA CCCCTG TGT CAAGGG GTTTGACTTTGGGAA HRM2_05440 619820 - 620818 + | transcriptional regulator, putative HRM2_05450 620897 - 621913 + | putative CRISPR-associated protein (uncharacterized protein, predicted to be involved in DNA repair) HRM2_05460 621923 - 622219 + | hypothetical protein HRM2_05470 622235 - 622900 + | putative DNA repair protein TERM 673 623509 - 623522 + G 78 -2.3 -5.23316 | opp_overlap 623510 623518, overlap 623510 CCTTGTAGGGTACAG ACCTG AAAT CAGGA TTTTTTCCTATGATC HRM2_05480 622916 - 624466 + | hypothetical protein HRM2_05490 624471 - 624920 + | hypothetical protein HRM2_05500 624921 - 625853 + | putative CPISPR-associated protein Cas2 (Csh2 family protein) TERM 674 626369 - 626381 + G 76 -5.5 -4.89339 | GAGTTGTTAGTTGCG CCGGA GTA TCTGG TTTTTATCCATGATT TERM 675 626621 - 626611 - g 76 -8.2 -4.19678 | TTACATGGCAACAAA GGCC GTT GGCC AAAGAGAGTATCGGG HRM2_05510 625901 - 626743 + | putative CRISPR-associated protein Cas5 TERM 676 628433 - 628417 - g 70 -2.1 -4.93318 | GAGAAGGGACAAAAA CTGGCGC AGT GCTTCAG GTCACAAATAAGATC HRM2_05520 626730 - 628991 + | putative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase) HRM2_05530 629012 - 629620 + | putative CRISPR-associated protein Cas4 HRM2_05540 630270 - 629740 - | hypothetical protein HRM2_05550 630931 - 630257 - | hypothetical protein HRM2_05560 631884 - 631729 - | hypothetical protein HRM2_05570 632093 - 631782 - | hypothetical protein HRM2_05580 632351 - 632151 - | hypothetical protein HRM2_05590 632579 - 632361 - | hypothetical protein HRM2_05600 633013 - 632654 - | hypothetical protein HRM2_05610 633965 - 633183 - | hypothetical protein TERM 677 633919 - 633894 - G 100 -12.5 -6.23545 | overlap 633912 TTGAAACAAAAAAAA CCCCACCCCGG CGAA CCAGGGCAGGG CACCTGGAATGCCTG TERM 678 634011 - 633990 - R 90 -2.1 -5.96219 | overlap 633992 GATTGACAAAAAAAA TGGGCCTGG AATG CCTGATCCA CGACAACAAGGATTG HRM2_05620 634405 - 634193 - | hypothetical protein HRM2_05630 634601 - 634398 - | hypothetical protein HRM2_05640 634933 - 634622 - | hypothetical protein HRM2_05650 635300 - 634848 - | hypothetical protein HRM2_05660 635775 - 635524 - | hypothetical protein HRM2_05670 636212 - 635940 - | hypothetical protein HRM2_05680 636772 - 636485 - | hypothetical protein TERM 679 636588 - 636612 + g 76 -12.9 -2.64794 | opp_overlap 636578 636579, overlap 636578 TCAAATCCAGCCGCA TCTGCGACGGA TTT TCCCTCGCAGA TGGTATCGGCTTCGG TERM 680 637092 - 637068 - R 100 -13 -5.26875 | opp_overlap 637068 GTTTGAAGCAAAAAA GGCAGTGTTA TTGTT TAACACTGCC TTTAAGATTCTCAAT TERM 681 637068 - 637092 + r 100 -13 -3.69621 | opp_overlap 637068 GTTTGAAGCAAAAAA GGCAGTGTTA TTGTT TAACACTGCC TTTAAGATTCTCAAT HRM2_05690 637547 - 637134 - | putative late embryogenesis abundant protein-like protein TERM 682 637695 - 637742 + H 73 -8.6 -3.72695 | gap 1, opp_overlap 637689 637688, overlap 637729 GCCGGAAACCCTTGT GCCATGCAAAGCAGGCACAATAT GAC ATATTTT-TCAGCTTTGCCTGGC TTTGCTGGACAAGCT TERM 683 638020 - 638008 - H 75 -5.5 -4.81249 | TTTCAAATCTAAAAA CCAGA AAC CCTGG GTGAGCGCTATTTGA TERM 684 639721 - 639748 + G 74 -4 -5.00616 | TACTGAATGGTTCAA GGCACAGGATTG AGCC CATTGCGGTGCC TTTTTTAAAAAAACA TERM 685 639896 - 639882 - g 70 -4.2 -4.61482 | GGTTTCAAAAAAGAA CAGGCA ACA TGCATG GACCTTTTTCTAAAA TERM 686 639931 - 639914 - g 74 -4.1 -5.00616 | opp_overlap 639930 CCTTTTTCTAAAAAA CAGGAAA TTGA TCCCCTG GATTCCTTCCATCTT HRM2_05700 638178 - 640625 + | putative protease (collagenase family protein) HRM2_05710 640755 - 641948 + | permease of the major facilitator superfamily TERM 687 642144 - 642104 - T 71 -4.8 -4.60924 | overlap 642093 TAAATCCTTTAAAAA GACATCCATCGTGTTTCA ATAGA TAAAACAGGACAGCTGTC TGAAAGACCGAAACA TERM 688 642341 - 642303 - T 100 -12 -5.44119 | opp_overlap 642303 TCGATCCCAAAAAAA TAGTCCACACATAAAC CATAGAT GTTTACATGTGGACTA TTGTCAATCTTTAAT HRM2_05720 642787 - 642515 - | hypothetical protein TERM 689 642571 - 642581 + g 71 -6.8 -4.13945 | CAATAACGTCCTCTT CCTC ATA GAGG TTTTCCGGTGGCAAT HRM2_05730 644850 - 643129 - | putative protease TERM 690 644478 - 644496 + g 100 -5.2 -6.13503 | GGTCCTCGTCGTCTG GCGAAGGT GCC ATCCTCGC TTTTTTTTGTTGGTG TERM 691 644874 - 644889 + r 91 -10.4 -4.08887 | CCTTTATTTTTTGGC CGGGAG TCAT CTCCCG TTTGATTTGGGTGAT HRM2_05740 647597 - 645918 - | signal transduction family protein (GGDEF domain protein) TERM 692 647580 - 647568 - G 80 -3.3 -5.3236 | AGAAGTGATAAAAAA GATCC CAT GGCTC TGTCGAAAATGTTTC HRM2_05750 647811 - 649478 + | CusS TERM 693 649859 - 649843 - g 74 -3.6 -5.00616 | opp_overlap 649843 649854, overlap 649854 TTGTGGTGGAAAAAA CCCTGG AAAAA CGAGGG TTGTTTCTGGACAAC TERM 694 649879 - 649854 - g 82 -7.6 -4.61527 | opp_overlap 649843 649854, overlap 649843 AAAACCCTGGAAAAA CGAGGGTTGT TTCTGG ACAACCTTCG TTTGCAGCAGCAGCT TERM 695 649854 - 649879 + G 77 -10.5 -3.53091 | opp_overlap 649843 649854, overlap 649843 AAAACCCTGGAAAAA CGAGGGTTGTT TCTG GACAACCTTCG TTTGCAGCAGCAGCT TERM 696 650546 - 650510 - g 74 -7.9 -4.14147 | overlap 650513 ACAGAACAATAAGAA CATCCGTGGAATTGCCC CCA GGGCACTTCGACTGCTG GAAAATTACTCCTGG HRM2_05760 649491 - 650846 + | sigma-54 dependent DNA-binding response regulator (NtrC-type regulator) rpoE 650892 - 651464 + | RpoE TERM 697 651683 - 651693 + G 76 -6.8 -4.44974 | opp_overlap 651683 TACGAAGAAAATAAA GCAG GTT CTGC TTTTCTGCGCTTTCA TERM 698 651693 - 651683 - g 82 -6.8 -4.90302 | opp_overlap 651683 TACGAAGAAAATAAA GCAG GTT CTGC TTTTCTGCGCTTTCA TERM 699 651728 - 651740 + G 82 -7.7 -4.6971 | overlap 651711 CGCGACCTCCGTCCT GCAGT TTT ACTGC TTTTGTTGGGCTTTA HRM2_05780 651548 - 651877 + | hypothetical protein HRM2_05790 651932 - 652426 + | hypothetical protein TERM 700 653173 - 653185 + G 74 -7.7 -4.15106 | overlap 653159 TGAGCAACAGTCGTT GGTCT TTG AGACC TTTTCCAAATTCGTG TERM 701 653440 - 653457 + G 74 -7.7 -4.15106 | gap 1, opp_overlap 653426, overlap 653443 TCCGATGATCGATTA TCG-GGCC GCT GGCCTCGA TTTTGACAGTTGGTC HRM2_05800 652757 - 654115 + | outer membrane efflux protein TERM 702 654970 - 654989 + G 71 -5 -4.56978 | gap 1, overlap 654973 654986 GGCGGTTGATGCCGG GTATGACGG CAA CCGTCG-AC TTTGTTGTTTACCAG HRM2_05810 654117 - 655340 + | macrolide-specific efflux protein (RND family protein) HRM2_05820 655337 - 656092 + | predicted ABC-type transporter, ATP-binding protein HRM2_05830 656079 - 657296 + | putative macrolipide-specific ABC-type efflux carrier (MacA conjunction protein) TERM 703 657383 - 657401 + T 79 -6.6 -4.68705 | GGCGCAGTAAAGCTT TGGCGCTG GTC CGCCGCCA TTTTGTTCCAGTTAT HRM2_05840 658472 - 657579 - | hypothetical protein TERM 704 657685 - 657697 + g 90 -9.1 -4.62471 | GCCCTGTCCATGCGT CCTCG ACC CGAGG TTTTTCCCAATTCCG HRM2_05850 659259 - 658678 - | putative cytoplasmic protein YrbL HRM2_05860 660508 - 659552 - | putative carbamoyl-phosphate synthase, large chain TERM 705 659633 - 659619 - G 79 -7.8 -4.56597 | TGCTCCGGTGAAAAA CCAAGC AAA GCCTGG CCATTAGAGACAAAA TERM 706 660604 - 660616 + r 78 -10.5 -3.26319 | GAGCCATAGCTCAAT CCGGC CGT GCCGG TTAATATGAAAAATT HRM2_05870 660847 - 660641 - | putative Zn-dependent hydrolase TERM 707 661861 - 661872 + H 85 -5.8 -5.10767 | GCGGTAAGTTGATGA TGGG CACC CCCA TTTTTCTCTTGCCTG HRM2_05880 662779 - 663552 + | signal transduction family protein (GGDEF domain protein) TERM 708 663608 - 663596 - f 89 -10.5 -3.9392 | TGTCATTTTAAATAA CCGGC ACG GCCGG AGCGAGGTATCTTCA TERM 709 663857 - 663894 + F 100 -17.9 -3.81 | overlap 663858 CCATTTTCCTTTTTT ACGATGCAGAGTGCAAC ACTT GTTGCATTCTGCATCGG TTCTTATGGGCTCGT TERM 710 663858 - 663893 + F 100 -21.4 -2.88118 | overlap 663857 CATTTTCCTTTTTTA CGATGCAGAGTGCAAC ACTT GTTGCATTCTGCATCG GTTCTTATGGGCTCG HRM2_05890 664067 - 664516 + | hypothetical protein TERM 711 664896 - 664881 - g 76 -4.7 -5.0538 | opp_overlap 664889 GGGGATGTGAAAAAA CTCCA GGCCCG TGGAG TCACAGCTTTTACCA pntA 664521 - 665699 + | PntA TERM 712 666111 - 666132 + G 74 -7.9 -4.19238 | TTGCGTTTGTCATGG CCGCCTTCA ACCT TGTGGGCGG TTTTGCCATTACGGA pntA2 665900 - 666202 + | PntA2 TERM 713 666637 - 666657 + G 100 -6.8 -5.88471 | opp_overlap 666637 GAAAGTTGTCCAACA CCCTGGCT CAGAA ACCCAGGG TTTTTTTTCGTCATA TERM 714 666986 - 666996 + G 76 -3.2 -5.10208 | GGCCATGAACCGCAG TCTG TTC CGGA TTTTTGTTCCGGTTG TERM 715 667005 - 667026 + G 77 -8.7 -4.09685 | opp_overlap 667016 TTCCGGATTTTTGTT CCGGTTGAA AAGG TTCGGCCGG TTTTGCAGCCTGAGC TERM 716 667277 - 667251 - g 100 -15.2 -4.14392 | opp_overlap 667249 667248 CTTGAATTTTTAAAA CACCTGCTTTCC ATG GGCAAGCAGGTG AAGTTTGCCATCCAT TERM 717 667477 - 667488 + G 73 -5.8 -4.48987 | overlap 667487 ACGATTCACCCATTT CAGG GATG CCTG TTTTGCTTGTCCAGG pntB 666195 - 668246 + | PntB TERM 718 668430 - 668441 + F 90 -2.2 -6.0458 | TTATTGGTTGTTTAT GGCA TGGT TGTC TTTTTTTTGGTTTGT HRM2_05930 668598 - 669038 + | flavodoxin family protein TERM 719 669076 - 669048 - T 100 -14.6 -3.37796 | opp_overlap 669048 TTGTAGTAGCCAGAA TGGCCGGAGCAG GCTAT CTGATCCGGCCA CAATAAAAATGCTCG HRM2_05940 672130 - 669134 - | two-component hybrid sensor and response regulator histidine kinase TERM 720 670033 - 670011 - G 72 -4.1 -4.78572 | GTCGAATCAACAAAA TCCCTGATC AAGCG GACAAGGGA TGCGGTCTTTTTGAC HRM2_05950 672247 - 673008 + | hypothetical protein HRM2_05960 672992 - 673150 + | hypothetical protein TERM 721 673275 - 673312 + F 71 -9.7 -2.68823 | overlap 673301 AGGTGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCATGCCG GTTATATGAAAAACC TERM 722 673301 - 673313 + F 80 -10.5 -3.48276 | overlap 673275 GAGCCATACCTCGCT CCGGC CAT GCCGG TTATATGAAAAACCC TERM 723 673515 - 673525 + G 71 -5.4 -4.56597 | ACCGCTTAAATCCCT CAAC TCA GTTG TTTTTAAGGGCAAGG HRM2_05970 673444 - 674412 + | putative Zn-dependent hydrolase TERM 724 674438 - 674426 - f 75 -9.1 -3.63095 | overlap 674424 GAGCAAAAAAAATCA CCCCT TTA AGGGG CTCAGATGTAAATAA HRM2_05980 675369 - 675896 + | hypothetical protein HRM2_05990 676736 - 675897 - | putative hydrolase (alpha/beta fold protein) TERM 725 676538 - 676525 - G 78 -2.3 -5.24129 | opp_overlap 676526, overlap 676526 676529 CGTTCGTATAAAAAA CCAGG GCAG CCTGT TGCCTTGCACAGGGC TERM 726 676851 - 676869 + G 70 -2.4 -5.00616 | CAGTACTGTATTATG CTGGAC CATCAGT GTTCAG TTTTTTGAAGCGGCA TERM 727 677372 - 677351 - g 74 -6.5 -4.30844 | ATGTCATGAGCAAAA CCGGCATGC AGAC GGATACCGG ATATCTGGACGCCTT HRM2_06000 676807 - 677724 + | putative permease (DMT super family) HRM2_06010 677857 - 678525 + | hypothetical protein HRM2_06020 679069 - 678563 - | putative thioesterase TERM 728 678918 - 678898 - G 83 -12.5 -3.54129 | opp_overlap 678912 CATAGGGCTGGTAAA GGGTGTCGG TGA CCGGCACCC TGGCCACCAGCCGGG HRM2_06030 680897 - 679146 - | hypothetical protein TERM 729 680391 - 680414 + g 82 -11.7 -3.54676 | opp_overlap 680385, overlap 680387 CGTGATAATGGGCAC GGCAGGTCC GTTCCA GGGCCTGCC TTCCTTTGGCTCGGT HRM2_06040 682419 - 680887 - | hypothetical protein HRM2_06050 684319 - 682448 - | hypothetical protein TERM 730 684549 - 684561 + H 100 -10.5 -4.96848 | ATGTCATCCATCGTT CCGGC CGT GCCGG TTTTTATATGAAACA TERM 731 684641 - 684653 + H 86 -10.5 -3.86346 | AGCAGATTCATCGTT CCGGC TGT GCCGG TTTATAAGAAACTCA TERM 732 685182 - 685194 + H 86 -10.5 -3.86346 | AGCAGATTCATCGTT CCGGC TGT GCCGG TTTATAAGAAACTCA TERM 733 685604 - 685583 - g 89 -2.3 -5.77853 | gap 1 AATTGTTAAAAAAAA GGC-CTTGAC ATC ATCAAACGCC TCATGTAGGGATCAT HRM2_06060 685428 - 685748 + | hypothetical protein TERM 734 685777 - 685799 + F 100 -12 -5.63517 | opp_overlap 685777 685790 685791 AACAAAGCGATCAAA GCCGTGGG CATAACT CCCACGGC TTTTTTGTTTCAGGC TERM 735 685799 - 685777 - f 100 -12 -3.83771 | opp_overlap 685777, overlap 685790 685791 AACAAAGCGATCAAA GCCGTGGG CATAACT CCCACGGC TTTTTTGTTTCAGGC TERM 736 685811 - 685841 + F 100 -15.4 -4.19506 | opp_overlap 685790 685791, overlap 685812 CGGCTTTTTTGTTTC AGGCCGTGGAGAAG CTC CTGCTCCACGGCCC TTTTAAACTTAACCT TERM 737 685812 - 685840 + F 100 -18.9 -3.11222 | opp_overlap 685790 685791, overlap 685811 GGCTTTTTTGTTTCA GGCCGTGGAGAAG CTC CTGCTCCACGGCC CTTTTAAACTTAACC TERM 738 686555 - 686539 - g 71 -5.7 -4.32034 | CCAGCATCATTAAAA CCAAGGG CAA CCCCGGG GTCCATATTGTGTTA aroF 685875 - 686927 + | AroF aroB1 686968 - 687999 + | AroB1 HRM2_06090 688650 - 687973 - | phage-related replication protein TERM 739 688116 - 688136 + g 87 -4.8 -5.42259 | AGACCGGGGTTGTTT TTTTACGA AAAAG TCGTGAAA TTTTTTTGAACATGG HRM2_06100 688737 - 689561 + | bifunctional homocysteine S-methyltransferase / 5,10-methylenetetrahydrofolate reductase protein HRM2_06110 689610 - 690002 + | hypothetical protein HRM2_06120 690017 - 690772 + | hypothetical protein TERM 740 691834 - 691846 + G 71 -10.5 -3.05963 | opp_overlap 691834 691833 691831 TGGCACTTCAAACAG CCGCC CTG GGCGG TATTGACGTGAGGAT TERM 741 691936 - 691946 + G 100 -4.6 -5.7946 | GGGATCTTCTTACGG CCGG GGT TCGG TTTTTTTATTACACC cls 690777 - 692225 + | Cls TERM 742 692872 - 692920 + G 75 -8.9 -3.87815 | gap 1, opp_overlap 692873 692875, overlap 692873 692875 ATCGCCATGGGAGAG ACACTTTCCGGGCAGTTG-GAT CAGGTT ATCACCACGGCCCGGAAGGTGA TTTATAGGGCTGAAA TERM 743 692873 - 692919 + G 76 -12.4 -2.92475 | gap 1, opp_overlap 692873 692875, overlap 692872 692875 TCGCCATGGGAGAGA CACTTTCCGGGCAGTTG-GAT CAGGTT ATCACCACGGCCCGGAAGGTG ATTTATAGGGCTGAA TERM 744 692919 - 692873 - g 70 -10.2 -2.89564 | gap 1, opp_overlap 692873 692872 692875, overlap 692875 TCGCCATGGGAGAGA CACTTTCCGGGCAGTTG-GAT CAGGTT ATCACCACGGCCCGGAAGGTG ATTTATAGGGCTGAA mcpB1 692359 - 694068 + | McpB1 tesB 694936 - 694058 - | TesB mdeA 695167 - 696372 + | MdeA TERM 745 696678 - 696688 + G 86 -3.2 -5.62288 | TGTTGCTGCAGGGTT TCTG GTT CGGA TTTTTATTTTGTTCC TERM 746 697210 - 697245 + G 70 -9 -3.551 | opp_overlap 697207 GCCCGGAAGCGAGAT TGGACGCCTCTGGATG CGGC CATGCAGGGGAGTTCA TTCTATAAATTACCG HRM2_06170 696442 - 697467 + | fatty acid desaturase (acyl-lipid desaturase) TERM 747 697465 - 697499 + T 73 -5.7 -4.51765 | opp_overlap 697464 697468, overlap 697464 697461 697470 697471 ATGGTTGCATTTAAT TGATCAGGGACAGAT CAATT ATCTGTCCCCTTTCA TTTGTTTAACTTATC TERM 748 697470 - 697494 + T 82 -8.6 -4.27211 | opp_overlap 697464 697468, overlap 697464 697461 697465 697471 TGCATTTAATTGATC AGGGACAGAT CAATT ATCTGTCCCC TTTCATTTGTTTAAC TERM 749 697471 - 697493 + T 86 -12.1 -3.15242 | opp_overlap 697464 697468, overlap 697464 697461 697470 697465 GCATTTAATTGATCA GGGACAGAT CAATT ATCTGTCCC CTTTCATTTGTTTAA HRM2_06180 697854 - 697510 - | cytochrome c, class III family protein rbr1 698443 - 697868 - | Rbr1 TERM 750 698292 - 698268 - G 86 -2.8 -5.63857 | gap 1, opp_overlap 698288, overlap 698269 AAAAATTTAAAAAAA CGCAGG-GCGT GTTC ACACTCCTGCC CGGCTGTTTCATCAA HRM2_06200 698651 - 698457 - | hypothetical ferredoxin-like protein HRM2_06210 700922 - 698778 - | mercuric reductase (Hg(II) reductase) TERM 751 700889 - 700861 - G 84 -4.5 -5.36364 | opp_overlap 700874, overlap 700863 TCAAAAAGATAAAAA CAGACCACCATTG CTG CAATGGCAGTCAT TACCAGGCTTTTGGT TERM 752 700887 - 700863 - G 91 -11.5 -4.2778 | opp_overlap 700874, overlap 700861 AAAAAGATAAAAACA GACCACCATTG CTG CAATGGCAGTC ATTACCAGGCTTTTG HRM2_06220 701683 - 700919 - | putative hydrolase (alpha/beta fold protein) TERM 753 702019 - 702002 - g 80 -2.6 -5.47218 | GTTTATCGAAAAAAA TCGCCG GGAATG CGGGGA CACCTATGATGCCAT TERM 754 702189 - 702207 + G 70 -3 -4.88736 | overlap 702193 TGCCGACTCTGTGGC GAAGGGGC ATG GTCCTGTC TTTTTGTCAATAATC HRM2_06230 701967 - 703382 + | hypothetical protein HRM2_06240 704437 - 703379 - | hypothetical protein speE1 705650 - 704343 - | SpeE1 TERM 755 704577 - 704567 - GR 71 -8.2 -3.53444 | overlap 704568 TCATCCCGTCGGAAA GGGC ACG GCCC ATGCCGACCATGGTG TERM 756 705294 - 705283 - GR 76 -4.4 -5.00616 | GTGGTTGGTAAAAAA CGTT TGGC AACG GCGATTACATCGGGA speD 706532 - 705675 - | SpeD TERM 757 706687 - 706699 + r 82 -10.5 -3.69395 | opp_overlap 706659, overlap 706660 GGCAGATACCCTGCT CCGGC CAT GCCGG TTATTCCATGGTAGA fadJ 707461 - 706700 - | FadJ TERM 758 706725 - 706741 + g 72 -3.5 -4.79949 | opp_overlap 706724 706725, overlap 706727 GTAGACTGGACAAAG GCCAGGG TAT CCCGGAC TTCTTTTTTTGAAAA oadB1 708613 - 707486 - | OadB1 TERM 759 707650 - 707663 + g 78 -3.7 -5.12785 | CGGATACGCCTGCGG CACCC AGAA GGGGG TTTATTTTTTCCTTG TERM 760 708241 - 708222 - G 77 -9.2 -4.07568 | TCGTTGGGTTCAAAA CCCAGGGC CAGC GCCCCGAG AAAGGTGATGAAGAT TERM 761 708333 - 708318 - G 70 -4.7 -4.71482 | AGTAAAGTGGAAAAA TCGGT CATGGC ACCGA TGCCAAGGAAGATCA HRM2_06290 709076 - 708654 - | hypothetical protein HRM2_06300 709541 - 709092 - | putative cAMP-dependent protein kinase, regulatory subunit TERM 762 709266 - 709244 - G 72 -9.8 -3.38046 | overlap 709242 709247 GTTGTATGGCAAACA CCAGACCCTG TTC CAGGGCCTTG ACAGTGCTTGTGTAT TERM 763 709350 - 709340 - G 70 -8.2 -3.7941 | GATGCTCCATAACAA GGGC TTT GCCC CCATCCATGGCAACG HRM2_06310 709813 - 710967 + | hypothetical protein TERM 764 710980 - 710968 - f 89 -10.5 -3.92542 | overlap 710969 GCCATTCCCAAATAA CCGGC ATG GCCGG AGCAGGGTGTCTGTC TERM 765 711007 - 710969 - f 79 -10.9 -2.95204 | overlap 710968 CCATTCCCAAATAAC CGGCATGGCCGGAGCAG GGTGT CTGTCCCGGCCACAACG AAATTTGAAGCTTGA TERM 766 712012 - 711999 - g 72 -8.1 -3.82603 | AATGTGGAAAGAGAA CCCCT GCCA AGGGG CGATACCATCCTCAA rbsA1 711252 - 712766 + | RbsA1 rbsC1 712815 - 713891 + | RbsC1 TERM 767 714436 - 714450 + G 70 -10 -3.33671 | opp_overlap 714413 714434 CAACGGAAACCCAGG GGGTGA ACG TCACCC TTGTCCGATACATGT TERM 768 714610 - 714626 + G 80 -4.4 -5.06816 | gap 1, overlap 714605 714610 714623 TGTGGAACCCGGGCC GG-GCCA TCCT TGGCGCC TTTTTGTTCGGCGGT TERM 769 714776 - 714762 - g 80 -2.1 -5.45652 | ACGGGCAACAAAAAA CTCAA CGCCC CTGAG ATGCTTGGTGAGCCC rbsC2 713892 - 714812 + | RbsC2 uspA10 715448 - 714957 - | UspA10 TERM 770 715322 - 715309 - G 74 -3.8 -5.02074 | overlap 715311 TCATCGGGGAAAAAA TCGC GGTCAG GCGA CTGCTCAATGTACAG HRM2_06360 716480 - 715521 - | hypothetical protein TERM 771 716488 - 716499 + r 71 -2.2 -5.09259 | overlap 716488 TCGGACATGCTTGCC TCCT GAAA GGGA TTTTATTTTAAACTA HRM2_06370 716939 - 716607 - | hypothetical protein TERM 772 716883 - 716897 + g 72 -3.6 -4.77036 | overlap 716884 GGTCAATCCAGCAGC TTCAAA TTT TTTGAG TTTTTCGTCATCCAA HRM2_06380 718163 - 717378 - | hypothetical protein TERM 773 718221 - 718241 + r 76 -11.2 -2.67958 | overlap 718218 TTTCCGTTGGTGGGG GGGGGTAA CGGGT TTACCCCC TGGGTTTCAATCTTC HRM2_06390 719132 - 718248 - | putative threonine efflux protein TERM 774 719413 - 719399 - g 70 -10 -3.21276 | overlap 719397 GGCTGTGGGAGAACA CAGTGG AAC CCACTG GTCAACCCCCAACAC HRM2_06400 719217 - 719963 + | hypothetical protein pldB 720787 - 719957 - | PldB HRM2_06420 721005 - 722723 + | transposase (IS4 family protein) HRM2_06430 722851 - 722720 - | hypothetical protein katG 723236 - 722913 - | KatG mvhD1 724404 - 723388 - | MvhD1 TERM 775 723794 - 723782 - GR 76 -3.3 -5.20534 | ATGAAGCAATAAAAA GTCCT GCA AGGCC GTACTGGGTCAGGGC TERM 776 723920 - 723931 + gr 91 -7.2 -5.15117 | AGCTGGAGCCGCTCG GGGC GAAT GCCC TTTTTTACCATTTTC HRM2_06460 725008 - 724151 - | hypothetical protein TERM 777 726292 - 726280 - g 84 -4.8 -5.24129 | opp_overlap 726280 CCCTGTGATAAAAAA CGAG GATGG CTCG CCTTTTTATCAACAG HRM2_06470 725353 - 726345 + | transposase (IS4 family protein) TERM 778 726594 - 726563 - T 100 -11.1 -5.27938 | gap 1, opp_overlap 726560 726565 726567 AGTTGTAAACAAAAA TAGACCATT-CGCT AAAAA AGCGTAATGGTCTA TCCTGATTTAATTAT TERM 779 726565 - 726592 + T 71 -9.3 -2.90456 | gap 1, opp_overlap 726563, overlap 726560 726567 TTGTAAACAAAAATA GACCATT-CGCT AAAAA AGCGTAATGGTC TATCCTGATTTAATT HRM2_06480 727466 - 726720 - | putative ATP/GTPase HRM2_06490 729078 - 727390 - | hypothetical protein TERM 780 727548 - 727578 + gr 80 -2.4 -5.47914 | TCTGGTTATGCTGAA GGATTTGCTTTGCC ATG GGCATGGAAAGACC TTTTTTATAATTTTT TERM 781 727644 - 727660 + gr 76 -5.1 -4.83169 | GCTCCAAAAAGGCGA TGATCTG ATC CAGCTCA TTTTTGTCCGGCAAT TERM 782 728922 - 728936 + gr 86 -5.6 -5.28683 | opp_overlap 728913 CAAGTAGGAGTGGCC CCGGAA TAA TGCCGG TTTTTTGATATTGAT TERM 783 728971 - 728988 + gr 80 -2.6 -5.52023 | overlap 728972 GTAATATTTTTTACT TGCTCG TTTGGC CGAGCC TTTTTTGTTCATGAT HRM2_06500 729646 - 729065 - | hypothetical protein TERM 784 729432 - 729415 - G 74 -9.9 -3.61715 | opp_overlap 729414 729413 CATTGTTGGGAAGAA TGTCTCC AATT GGAGACA GATTGTTGATAACCT dnaG1 730017 - 729646 - | DnaG1 HRM2_06520 730716 - 730318 - | hypothetical protein HRM2_06530 730973 - 731326 + | transposase (IS4 family protein) HRM2_06540 732598 - 731999 - | predicted transposase (IS5 family protein) TERM 785 732114 - 732143 + g 74 -8.5 -4.08692 | opp_overlap 732106 732105 732114 732112 TTAAAACCATGAATA CCATGATCCGGGC ATCG GTCCAGACCATGG TTTTCCAACCCGTTG TERM 786 732143 - 732114 - G 73 -10.7 -3.25111 | opp_overlap 732114, overlap 732106 732105 732112 TTAAAACCATGAATA CCATGATCCGGGC ATCG GTCCAGACCATGG TTTTCCAACCCGTTG HRM2_06550 732980 - 732579 - | transposase (IS4 family protein) HRM2_06560 733450 - 732980 - | hypothetical protein TERM 787 736825 - 736814 - g 74 -7.2 -4.12942 | opp_overlap 736804, overlap 736804 736815 TTAAACCGCCCAAAA GCGG TCTT CCGC CCGAAACACGTTTTT TERM 788 737447 - 737434 - g 74 -9.5 -3.56099 | overlap 737418 737424 GACAACCTCGGCAAA GCGGC GACT GCCGC CCGCCTGGCAGCGAA HRM2_06570 733732 - 737535 + | hypothetical protein HRM2_06580 737680 - 740718 + | hypothetical protein TERM 789 740918 - 740866 - T 100 -33.2 -2.91429 | gap 1, opp_overlap 740866 740875, overlap 740856 740875 TAAAAGGTTGAGATA TGCACCCAACCGGGTACTGGCACAA CATG TTGTGCCAGTACCCGGTTGGGT-CA AAACATTCCTGAAAT TERM 790 740866 - 740923 + T 84 -11.7 -3.16564 | gap 4, opp_overlap 740856 740866 740875, overlap 740875 TAAAAGGTTGAGATA TG----CACCCAACCGGGTACTGGCACAA CATG TTGTGCCAGTACCCGGTTGGGTCAAAACA TTCCTGAAATAAAAA TERM 791 740875 - 740910 + T 100 -26.4 -3.05715 | opp_overlap 740856 740866 740875, overlap 740866 GAGATATGCACCCAA CCGGGTACTGGCACAA CATG TTGTGCCAGTACCCGG TTGGGTCAAAACATT TERM 792 740910 - 740875 - T 100 -26.4 -3.09491 | opp_overlap 740875 740866, overlap 740856 740866 GAGATATGCACCCAA CCGGGTACTGGCACAA CATG TTGTGCCAGTACCCGG TTGGGTCAAAACATT TERM 793 741013 - 740996 - T 77 -4.9 -5.02231 | opp_overlap 740996, overlap 740990 GAAAAAGATCAAAAA TCATCAA ATTT CTGATGA TTTTGGGCATAATTC HRM2_06590 741886 - 741068 - | putative transposase HRM2_06600 742414 - 742037 - | putative transposase TERM 794 743096 - 743079 - R 74 -7 -4.27584 | ACTGGCAATCTAAAA TGGTGC GGCATG GCACCA GGGTCAAGAAAATAA HRM2_06610 743714 - 743271 - | hypothetical protein TERM 795 743692 - 743681 - G 78 -3.6 -5.20534 | ATGAAGCAATAAAAA GCCC TGCA AGGC CATATTGGGTCAGGG prmA1 744547 - 743702 - | PrmA1 HRM2_06630 744887 - 744531 - | hypothetical protein HRM2_06640 745536 - 744880 - | hypothetical protein trmE 746945 - 745548 - | TrmE HRM2_06660 748093 - 746942 - | R3H domain protein (single-stranded nucleic acid binding protein) TERM 796 747112 - 747123 + g 74 -3.6 -4.94962 | overlap 747119 TCTGGTTAATGGTCG CGGG TTTG CCTG TTTTCTTTGCCTTGT TERM 797 747899 - 747911 + g 70 -3.3 -4.82901 | ATCCCAGCCAACCCC GGTTG ACC CACCC TTTTTGTCGGGCAGG oxaA 749782 - 748109 - | OxaA TERM 798 749671 - 749695 + g 71 -7 -4.2349 | opp_overlap 749670 CATTTGATACGATAG CCTGGTCCGG TTTTT CCGGTACAGG TTTTGAATCTACAAA HRM2_06680 750098 - 749886 - | hypothetical protein TERM 799 749998 - 749956 - G 80 -10.6 -3.67611 | opp_overlap 749957, overlap 749958 CTTACTGCAAGACAA GAGCCTTTAAGGCTGCCATG GAT CATGACAGCCTCAAATGCAT ATTGGGAACACGTTG TERM 800 749996 - 749958 - G 100 -17.6 -3.41738 | opp_overlap 749957, overlap 749956 TACTGCAAGACAAGA GCCTTTAAGGCTGCCATG GAT CATGACAGCCTCAAATGC ATATTGGGAACACGT rnpA 750444 - 750091 - | RnpA TERM 801 750414 - 750396 - G 70 -11 -2.6369 | opp_overlap 750396, overlap 750395 750394 ATAATTTTAAAAAGT CGGCCCTT TTT AAGAGCCG TTCAGTTTTAGGGAA rpmH 750593 - 750459 - | RpmH rne1 752304 - 750745 - | Rne1 TERM 802 751029 - 751049 + g 71 -5.4 -4.51777 | GTTCACAAAGGGTAC GGGTGAGG TTTTT TCTTACCC TTTTCCTTGTCATCT TERM 803 751584 - 751624 + g 76 -6.7 -4.5448 | overlap 751587 CCCTGAAGGTCACGG TGAGATCCCGGTAGAGCAG GGT CGGCGCTGCCGAGGTCTTG TTCTTTTTCTGGATG TERM 804 751587 - 751621 + g 79 -8.4 -4.36508 | overlap 751584 TGAAGGTCACGGTGA GATCCCGGTAGAGCAG GGT CGGCGCTGCCGAGGTC TTGTTCTTTTTCTGG TERM 805 751866 - 751896 + g 74 -7.4 -4.16943 | overlap 751860 GCGAGATGTGGGCCG TCACCCGTGGGCCC TTG GTGCCGATGGGGGA TTTTGAGATCTGCAC HRM2_06720 754871 - 752298 - | radical SAM domain protein TERM 806 753748 - 753769 + g 100 -6.5 -5.77853 | overlap 753749 CTCTGGGTGCCGGCC TCGGGTGCA ATGG TGAACCCGG TTTTTTTTACCCGTT TERM 807 753749 - 753768 + g 71 -7.8 -4.05085 | overlap 753748 TCTGGGTGCCGGCCT CGGGTGCA ATGG TGAACCCG GTTTTTTTTACCCGT TERM 808 754218 - 754185 - G 70 -8.9 -3.53012 | gap 1, opp_overlap 754192, overlap 754188 GGCGTGCTCTGGAAA CAACGGCTCAAGGGTC TGG AACCCCTG-GTCGTTG AAGTCTGCCCGGTAA TERM 809 756283 - 756304 + G 71 -7.3 -4.11751 | overlap 756274 GATTTGGAACGGTTT CCCATTCTG GGTT TGGAATGGG TTTTGAGCGGTTCCT asnS 755013 - 756395 + | AsnS HRM2_06740 756417 - 756620 + | hypothetical protein TERM 810 756611 - 756659 + T 74 -7.9 -3.91676 | opp_overlap 756621, overlap 756615 756618 756649 CTGTGGGGATCTCAT GGGCGAATAAGCCTGCCCCCGCC ATG GACGGGGGCAGACAGATTCTATC TGTTTTCGTTTCTAA TERM 811 756615 - 756655 + T 100 -13.9 -3.31476 | opp_overlap 756621, overlap 756611 756618 756649 GGGGATCTCATGGGC GAATAAGCCTGCCCCCGCC ATG GACGGGGGCAGACAGATTC TATCTGTTTTCGTTT TERM 812 756618 - 756652 + T 84 -9.8 -3.76289 | opp_overlap 756621, overlap 756615 756611 756649 GATCTCATGGGCGAA TAAGCCTGCCCCCGCC ATG GACGGGGGCAGACAGA TTCTATCTGTTTTCG TERM 813 756649 - 756621 - T 100 -20.3 -3.62597 | opp_overlap 756618 756615 756611 CTCATGGGCGAATAA GCCTGCCCCCGCC ATG GACGGGGGCAGAC AGATTCTATCTGTTT TERM 814 756649 - 756661 + T 77 -6.3 -4.63479 | overlap 756618 756615 756611 ATGGACGGGGGCAGA CAGAT TCT ATCTG TTTTCGTTTCTAATG cobT1 757716 - 756655 - | CobT1 thiC 759040 - 757721 - | ThiC TERM 815 759107 - 759078 - R 100 -8.5 -5.75342 | opp_overlap 759078 TTCCGGCAAAAAAAA TCCCGGAACCGAC AGGT GTCAGCCCTGGGA TTTACCATCTCTCCT HRM2_06770 759317 - 759096 - | hypothetical protein TERM 816 759574 - 759592 + H 78 -9.6 -3.68265 | ACGGAAGGTTTGTTT TGCGGTAA GTG TTGCCGCA TTTGAAATTAAATTT TERM 817 760080 - 760099 + G 74 -3.5 -4.96996 | opp_overlap 760082, overlap 760082 CAGTTTTTCAGCCAG AATGCCC CAGGCA GGGCATA TTTCTTTTATTTCCC TERM 818 760983 - 761004 + G 71 -7.3 -4.03167 | opp_overlap 760983 TAAGTTCCCCGAAAA TGCAGCCAA ATCC TTTGCTGCA TTGTTTCGGTTCTCC TERM 819 761004 - 760983 - g 71 -7.3 -4.08692 | opp_overlap 760983 TAAGTTCCCCGAAAA TGCAGCCAA ATCC TTTGCTGCA TTGTTTCGGTTCTCC sucD1 759628 - 761778 + | SucD1 TERM 820 761850 - 761808 - T 100 -25.9 -3.46202 | gap 1 AAACAGATGAAGCAA GTATTGCCGGGGTGGGGTTG ATCA CAACCCCAC-CCGGCAATAC TCAAAAATCGGTGCC HRM2_06790 762694 - 761942 - | hypothetical protein HRM2_06800 764436 - 762691 - | putative general secretion pathway protein A TERM 821 763251 - 763219 - G 76 -6.1 -4.59773 | overlap 763220 763221 763223 CCCTATTTTGAAAAA GTCATGGTCTGCCTG GAT CTGGCTGACCATGGG GGTGATGGTGGGGGT TERM 822 763250 - 763220 - G 72 -9.6 -3.35542 | overlap 763219 763221 763223 CCTATTTTGAAAAAG TCATGGTCTGCCTG GAT CTGGCTGACCATGG GGGTGATGGTGGGGG TERM 823 763249 - 763221 - G 76 -13.1 -2.61004 | overlap 763220 763219 763223 CTATTTTGAAAAAGT CATGGTCTGCCTG GAT CTGGCTGACCATG GGGGTGATGGTGGGG TERM 824 763986 - 764006 + g 70 -8.3 -3.7347 | TCAGCTTGTTCTTTG TGGTCTCCA GGT TGGAGAGCA TTCTTAGCTGTTCCA HRM2_06810 765584 - 764442 - | putative membrane efflux protein (permease) TERM 825 764938 - 764906 - G 73 -9.1 -3.69469 | overlap 764904 764928 764929 ATACGGGAAGAAACA CGGCCATGGCC GAATGCATGAA GGCCCTGGCCG AAAGGATGCCGGCCA TERM 826 765628 - 765652 + r 74 -4.9 -4.8667 | opp_overlap 765628 GATGGATGTCAAAAA GGACCGGGA TTTTTGT TCTCGGCCC TTTTTATGAAATCTG TERM 827 765652 - 765628 - R 71 -4.9 -4.62783 | opp_overlap 765628 GATGGATGTCAAAAA GGACCGGGA TTTTTGT TCTCGGCCC TTTTTATGAAATCTG glnA1 767260 - 765848 - | GlnA1 glnB1 767634 - 767296 - | GlnB1 glnD 770279 - 767664 - | GlnD TERM 828 769118 - 769099 - G 77 -9.2 -4.08945 | opp_overlap 769098, overlap 769100 AGGATTTTTTCAAAA TCCCGGGC ATTG GCCGGGGA CTCTCTGAAGCCTTT TERM 829 770505 - 770475 - R 100 -16.2 -3.34233 | overlap 770466 TGAGAAGTGGCATAA CCTGAAGCCGCACA AAA TTTGCGGCTCCAGG TTGAAATCCGGTGAG tatA 770738 - 770538 - | TatA TERM 830 770895 - 770905 + H 85 -2.4 -5.76949 | GAAATTTTTATGGGG GCGG GTG CCGG TTTTTTTTCAGGCTC TERM 831 771890 - 771872 - g 76 -5.8 -4.63218 | overlap 771874 TGTTGTTCAAGAAAA GTCCGGAC TAT GACCGGGC AAGAAGCCTCACCCC HRM2_06860 771067 - 771924 + | putative 26S protease regulatory subunit S10B HRM2_06870 772109 - 773374 + | hypothetical protein tatD1 774155 - 773361 - | TatD1 TERM 832 774241 - 774260 + H 81 -9.4 -3.76968 | opp_overlap 774245 AACATGGATTTGGCA GCAATTCT AATT AGAATTGC TTTGGTGAATGGCTT HRM2_06890 774450 - 774950 + | hypothetical protein cysE1 775036 - 776013 + | CysE1 cysA1 775997 - 776926 + | CysA1 TERM 833 777504 - 777525 + G 70 -9.5 -3.25166 | overlap 777502 777501 CCCCTTCCATGATCA TTGTTTCCC TTTC GGGAAACGA TCCTTTTTCCCCTGA TERM 834 777772 - 777743 - g 80 -4.3 -5.06451 | TACCATCTCAAAAAA GATTCAGCAGAAA ACAG TTCCTGGTGCATC GCCGCAGATCACCTG TERM 835 777784 - 777802 + G 100 -11 -4.72272 | opp_overlap 777784 CATCGCCGCAGATCA CCTGGTCA TGA TGGCCAGG TTTTTAATGACCGGC TERM 836 778078 - 778090 + G 73 -6.3 -4.5123 | opp_overlap 778077 CAAGGCCAAGGCAAC GGTTT CAA AAACC TTTCTTTCCTGCCTT nqrA 777047 - 778375 + | NqrA TERM 837 778900 - 778916 + G 84 -2.2 -5.61277 | overlap 778897 778905 AACATTCTCAATCCC GCCC TCACGGCCC GGGC TTTTATTTTTTTCTC TERM 838 779044 - 779063 + G 70 -4.2 -4.65895 | gap 1, overlap 779047 GGCGGGACGATCACC CAGGCCCTG TCC CAGG-CCGG TTTTTCCCTGACCAA TERM 839 779258 - 779275 + G 71 -7.7 -4.04318 | gap 1, overlap 779258 GCAATGCGAGCACCT GGGG-CCA TGC TGGTCCCC TTTATCATCTGTGCG nqrB 778372 - 779532 + | NqrB TERM 840 780264 - 780239 - g 71 -6.7 -4.14243 | GACCTGATCCCAAAA GGTGCAGGCAC CCCA GAACCTGCCCC GGTAAAAAAATAAGG nqrC 779525 - 780277 + | NqrC TERM 841 780871 - 780830 - g 77 -10.2 -3.54475 | gap 1, opp_overlap 780829 780830 780850 GGGTTCATGATAGAA GCCGGGTACCAG-AACATG GGGCT CATGGTGCTGGCACCGGGC GCTTTTTTTATTATC TERM 842 780850 - 780873 + G 100 -4.4 -5.88565 | opp_overlap 780830, overlap 780830 780829 GTACCAGAACATGGG GCTCATGGTG CTGG CACCGGGCGC TTTTTTTATTATCGG nqrD 780311 - 780943 + | NqrD TERM 843 781427 - 781437 + G 74 -2.4 -5.08601 | CCCCCTTCTATATGC GGCC CTT GGCG TTTTTCTTCCCCTGA nqrE 781095 - 781703 + | NqrE TERM 844 782058 - 782030 - g 77 -10.9 -3.51329 | GAGCCGCAAGGAGAA GCTTGCCGGCAAG CGC CTCGCCTGCCAGC TCAAGGTCAAGAACG TERM 845 782345 - 782334 - g 73 -5.8 -4.54477 | GCAAAAGGTATAAAA CCTG GGTT CAGG GCCTATTCCCTGGCC nqrF 781725 - 782936 + | NqrF HRM2_06980 782948 - 783490 + | putative hydrolase, HD superfamily protein HRM2_07000 784611 - 784000 - | putative phosphoglycerate/bisphosphoglycerate mutase (Phosphoglyceromutase) (PGAM) HRM2_06990 783465 - 784076 + | putative molybdopterine-guanine dinucleotide biosynthesis protein MobA TERM 846 784200 - 784175 - GT 72 -9.7 -2.8055 | overlap 784173 784197 CAGTTGAGAATATGA TCCCTGATCCC CATG GAGATCAGGGG AGGGTGACCCCGTCG HRM2_07010 785594 - 784608 - | putative xanthine and CO dehydrogenases maturation factor HRM2_07020 787038 - 785644 - | coenzyme F390 synthetase-like protein TERM 847 786870 - 786887 + gr 83 -3.3 -5.42259 | overlap 786872 AAAAGGGGCTTTTCT CCCTGGC CAGA GTCAGCG TTTTTTTCAGCATCC HRM2_07030 788377 - 787004 - | Fe-S oxidoreductase family protein (selenocysteine protein) TERM 848 787201 - 787217 + gr 76 -4.3 -5.02074 | opp_overlap 787201 787202, overlap 787202 ACCGGCTTAAAAAAA TCCCAAG ATC CATGGGG TTTTTTGCCAGATAA TERM 849 787217 - 787201 - GR 80 -2.1 -5.40474 | opp_overlap 787201 787202, overlap 787202 ACCGGCTTAAAAAAA TCCCAAG ATC CATGGGG TTTTTTGCCAGATAA TERM 850 787950 - 787968 + gr 86 -6.6 -4.95896 | overlap 787952 GAAATCTGGATGTTG CACTGGCC ATT GGTCAGCG TTTTTATCCGTTTGT TERM 851 788352 - 788376 + gr 71 -7 -4.10161 | opp_overlap 788356, overlap 788353 CTATGGGTATGGGCA AGCACCCGGG TTTGT CCAGGGTGCA TTTTCAGGGCTCGTC TERM 852 788353 - 788375 + gr 76 -10.5 -3.05775 | opp_overlap 788356, overlap 788352 TATGGGTATGGGCAA GCACCCGGG TTTGT CCAGGGTGC ATTTTCAGGGCTCGT HRM2_07040 788835 - 788380 - | hypothetical protein TERM 853 788725 - 788748 + g 77 -10.2 -3.61517 | opp_overlap 788727, overlap 788712 TGCCATGGCCCGAAC CAGGCCCGGG TTTG TCCGGCCCTG TTCTTCAAGGGCCAT HRM2_07050 789562 - 788828 - | putative SAM-dependent methyltransferase TERM 854 789439 - 789427 - G 73 -10.5 -3.31263 | ACCCCACGTCCAGAA CCCGG TCT CCGGG GTGAAGATCACATGC HRM2_07060 789778 - 789566 - | hypothetical protein HRM2_07070 792104 - 789780 - | Fe-S oxidoreductase (iron-sulfur cluster-binding domain protein) TERM 855 791702 - 791717 + g 70 -2.5 -5.0133 | TGCCGGTGGTGAAAA GGGTG ACGCCA TACCC TTTTTTCAAGAGATC TERM 856 791774 - 791784 + g 91 -3.2 -5.83822 | TTTCCCCAACAACGG CCAT GGT GTGG TTTTTTTTCGGTATG TERM 857 792164 - 792126 - R 74 -10.2 -2.57132 | opp_overlap 792126 792125, overlap 792125 CCTGTTCTGGATAAT CGGCATGGCCGGAACA TGATATC TGCCCCGGCCGTGACG GTTATAAAAAAAAAC TERM 858 792179 - 792219 + r 100 -19.8 -3.94 | opp_overlap 792179 792181 792183 GGTTATAAAAAAAAA CTGATGCGGCCGGCCCAT ATACC ATGGGCCGGCCGGATTGG TTATTTGGGCATTGC TERM 859 792219 - 792179 - R 100 -16.1 -6.22802 | opp_overlap 792179, overlap 792181 792183 GGTTATAAAAAAAAA CTGATGCGGCCGGCCCATA TAC CATGGGCCGGCCGGATTGG TTATTTGGGCATTGC TERM 860 792217 - 792181 - R 100 -17.3 -3.17606 | opp_overlap 792179, overlap 792179 792183 TTATAAAAAAAAACT GATGCGGCCGGCCCATA TAC CATGGGCCGGCCGGATT GGTTATTTGGGCATT TERM 861 792215 - 792183 - R 100 -19.9 -3.11603 | opp_overlap 792179, overlap 792181 792179 ATAAAAAAAAACTGA TGCGGCCGGCCCATA TAC CATGGGCCGGCCGGA TTGGTTATTTGGGCA mop1 794937 - 792220 - | Mop1 TERM 862 792652 - 792673 + g 71 -5.7 -4.36931 | overlap 792653 792670 CCCGTACATGTATCC TGCCAGGGG ATCT CCCTGGGCG TTTTCGTCTCCATTG TERM 863 793215 - 793228 + g 74 -8.1 -4.05322 | GTGCACATCCAGTGG GGGTG GTGG CACCC TTTCTATAGACGTTT HRM2_07090 796002 - 794980 - | putative molybdopterin biosynthesis protein moeA TERM 864 795248 - 795228 - G 75 -10.4 -3.3514 | opp_overlap 795234 795236, overlap 795229 ATCCATAGGTCACAA CCCGGGCA CCGGT TGCCCGGA TGGCCGCCGGTGTCT TERM 865 795247 - 795229 - G 73 -11.7 -2.60763 | opp_overlap 795234 795236, overlap 795228 TCCATAGGTCACAAC CCGGGCA CCGGT TGCCCGG ATGGCCGCCGGTGTC TERM 866 795234 - 795260 + g 71 -11.5 -2.82635 | opp_overlap 795229 795228, overlap 795236 AGGTCACAACCCGGG CACCGGTTGCC CGGAT GGCCGCCGGTG TCTGGTCGTCGGGAT TERM 867 795395 - 795408 + g 74 -2.5 -5.06414 | CGTAGAATGGAACTG TTTAA AAGG TTAAA TTTTTCTTCAAGAAC TERM 868 795675 - 795691 + g 70 -2.9 -4.86385 | opp_overlap 795651, overlap 795676 795681 CAATACTGTTGATAC GGTTCAG GGC CTGGACA TTTATTTTTAAAAGT TERM 869 796736 - 796723 - H 78 -2.4 -5.56568 | ACACCACTAAAAAAA TCCT GGCGGA AGGA AATCGGAAAAAAAGA TERM 870 796831 - 796803 - H 86 -6.7 -4.99972 | opp_overlap 796803, overlap 796797 ATAAAAGACTAAAAA GGGCAAGGTCAAT AAA ATTGATTCTGCCC TTTTAACGTTAGCAG TERM 871 796803 - 796831 + H 83 -8.9 -4.19238 | opp_overlap 796803 796797 ATAAAAGACTAAAAA GGGCAAGGTCAAT AAA ATTGATTCTGCCC TTTTAACGTTAGCAG HRM2_07100 796854 - 798182 + | sigma-54 dependent DNA-binding response regulator HRM2_07110 798399 - 798842 + | hypothetical protein TERM 872 798862 - 798850 - f 74 -6.9 -4.29327 | CAGAATGAACATAAA CCGAC ACG GCCGG AATGAGGTACCTGTT TERM 873 799325 - 799336 + G 78 -5.8 -4.82901 | TTATGCAGAACATCG GTGC TGCC GCAC TTTTTCTGCCGGCCA HRM2_07120 798979 - 800811 + | sulfur deprivation response regulator (sodium-dependent transporter protein) TERM 874 801221 - 801207 - g 70 -4.2 -4.66953 | overlap 801218 CCAATATGGTAAAAA GGGATA AAA TTTCCC CCCAGGAGGCCCGTT cmk4 800840 - 801652 + | Cmk4 cmk5 801709 - 802500 + | Cmk5 HRM2_07150 802534 - 802959 + | sigma-54 dependent DNA-binding response regulator TERM 875 803203 - 803215 + G 76 -4.8 -5.00616 | overlap 803179 TCTGCAAAATGCAAG GGCA TTGTT TGCC TTTTTTGACGACGGC TERM 876 803847 - 803820 - g 81 -12.8 -3.31231 | overlap 803818 803827 AAACAACGGACAAGA CCCACAATCCAC CGGA GTGGATTGCAGG GGTGAGCGAGCACCA HRM2_07160 803099 - 804103 + | hypothetical protein TERM 877 804116 - 804104 - f 89 -10.5 -3.90922 | ACCCTTTTCAAATAA CCGGC ACG GCCGG AGCGAGGGATGGTAT TERM 878 804343 - 804331 - f 100 -10.5 -4.37658 | AAGTTTCTTATAAAA CCGGC ATA GCCGG AGCAACGAAACGACC TERM 879 804522 - 804512 - g 86 -6.8 -5.00616 | overlap 804496 CTGCCCTGGAAAAAA CAGG GGA CCTG GTTGAAACCTTTCAA HRM2_07170 804430 - 804810 + | sensory box histidine kinase/response regulator ppsA3 804843 - 807392 + | PpsA3 mtrB 807498 - 809012 + | MtrB TERM 880 809020 - 809059 + T 100 -11.7 -5.43866 | gap 1, opp_overlap 809005 809023 TGCCCTGAAACGATT CAAGTCAAAACCA-CCCT GTATA AGCGCTGGTTTTGACTTG TTTTTTTAAAAGTTG hspA 809435 - 809124 - | HspA TERM 881 809995 - 810023 + G 81 -6 -4.91109 | gap 1, overlap 810006 GGCCCTTTCATATCT GCCCGTTGA-TAC CGGT GTGGTCATCGGGC TTTTTATCGTGGCGG HRM2_07210 809726 - 810664 + | hypothetical protein HRM2_07220 811384 - 810719 - | hypothetical protein TERM 882 811035 - 811012 - G 76 -11 -3.25881 | AGATGAAATAGGCAA CCAGGCTTGC TCCG GCAATCCTGG GCATGAACGAAAAGA TERM 883 811144 - 811160 + g 78 -3.5 -5.17054 | opp_overlap 811144, overlap 811135 811133 CCACCAGGGAGAAAA GGCCCAG GTA CACGGCC TTTTTTGCCTCTTGT TERM 884 811530 - 811513 - R 73 -9.9 -2.90496 | overlap 811510 GTCCCCTTTAAATTA TGGGAAG TCCC CTTCCCA ATGAGCCAACGACGA hutU1 813141 - 811567 - | HutU1 TERM 885 812310 - 812323 + g 70 -4.5 -4.59853 | opp_overlap 812298, overlap 812311 AGACAAAGCCGTCCT TGGCA TCCA TGCCG TTTTTCGACACTTCG TERM 886 812642 - 812653 + g 74 -2.2 -5.18371 | overlap 812619 812617 CCGTGGAAGGCGATG GAGG TGTT CTTC TTTTCTTTTATGGCC HRM2_07240 813634 - 814065 + | hypothetical protein TERM 887 814317 - 814301 - f 75 -2.3 -5.29385 | opp_overlap 814301, overlap 814306 AATTTAAGGAAAAAA TAAATCA AAT TGATTTG TTGTATAAACTTAAC HRM2_07250 814679 - 814855 + | putative plasmid maintenance system killer protein HRM2_07260 814868 - 815167 + | plasmid maintenance system antidote protein (HTH-type transcriptional regulator) cspG 815364 - 816017 + | CspG TERM 888 816083 - 816098 + F 75 -9 -3.59979 | opp_overlap 816083 TGAGATACTTCAGAA CCGCAA TTTA TTGCGG TTTCCCATGGGAACG TERM 889 816098 - 816083 - f 71 -9 -3.35934 | opp_overlap 816083 TGAGATACTTCAGAA CCGCAA TTTA TTGCGG TTTCCCATGGGAACG TERM 890 816337 - 816310 - f 74 -4.2 -5.055 | gap 1, opp_overlap 816316, overlap 816313 TTAATCGGGAAAAAA GACCATCAAAGCC TTT GTCTCTGATG-TC ATCAAAAGGATTTAG HRM2_07280 816973 - 818391 + | Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) HRM2_07290 818455 - 818754 + | hypothetical protein TERM 891 818826 - 818786 - f 100 -11.3 -4.93877 | gap 1, overlap 818787 TTTCAGCAAATAAAA CCAGCCGATTTTACCCGC AAAAAG GTGGGTAAAA-CGGCTGA CCCTGGCTTTTACTG TERM 892 818825 - 818787 - f 100 -12.6 -3.55603 | gap 1, overlap 818786 TTCAGCAAATAAAAC CAGCCGATTTTACCCGC AAAAAG GTGGGTAAAA-CGGCTG ACCCTGGCTTTTACT TERM 893 819341 - 819325 - g 85 -3.7 -5.47399 | TCAATTGGAAAAAAA TGACACC ATT GATATCA TTGTCCTTGATATTA HRM2_07300 819197 - 819652 + | response regulator (CheY-like receiver domain) HRM2_07310 819726 - 820613 + | hypothetical protein HRM2_07320 821017 - 821871 + | two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) TERM 894 822150 - 822138 - g 81 -6.3 -5.02476 | ATACGCTTGAAAAAA TCCAA TCC TTGGA AAATAAATTGGGCTT HRM2_07330 821996 - 822190 + | hypothetical protein TERM 895 822230 - 822264 + G 89 -10.9 -4.37092 | gap 1, opp_overlap 822229 GCTCTGTTGAGAGAG TTGGGCTTGAACAGGT GGAG GCTTGTTCA-GCCCAA TTTTATGGGAAACAT HRM2_07340 822190 - 822519 + | hypothetical protein TERM 896 823095 - 823081 - g 73 -2.8 -5.00895 | opp_overlap 823081 GCGATCAGAGAAAAA GCAGAT ATG ATTTGC ATTTCTTCAAGTCTC mtbC1 822643 - 823305 + | MtbC1 TERM 897 823776 - 823745 - T 100 -11.1 -5.27938 | gap 1, opp_overlap 823742 823747 823749 AGTTGTAAACAAAAA TAGACCATT-CGCT AAAAA AGCGTAATGGTCTA TCCTGATTTAATTAT TERM 898 823747 - 823774 + T 71 -9.3 -2.90456 | gap 1, opp_overlap 823745, overlap 823742 823749 TTGTAAACAAAAATA GACCATT-CGCT AAAAA AGCGTAATGGTC TATCCTGATTTAATT HRM2_07360 824648 - 823902 - | hypothetical protein HRM2_07370 826260 - 824572 - | hypothetical protein TERM 899 824730 - 824760 + gr 80 -2.4 -5.47914 | TCTGGTTATGCTGAA GGATTTGCTTTGCC ATG GGCATGGAAAGACC TTTTTTATAATTTTT TERM 900 824826 - 824842 + gr 76 -5.1 -4.83169 | GCTCCAAAAAGGCGA TGATCTG ATC CAGCTCA TTTTTGTCCGGCAAT TERM 901 826104 - 826118 + gr 86 -5.6 -5.28683 | opp_overlap 826095 CAAGTAGGAGTGGCC CCGGAA TAA TGCCGG TTTTTTGATATTGAT TERM 902 826153 - 826170 + gr 80 -2.6 -5.52023 | overlap 826154 GTAATATTTTTTACT TGCTCG TTTGGC CGAGCC TTTTTTGTTCATGAT HRM2_07380 826828 - 826247 - | hypothetical protein TERM 903 826614 - 826597 - G 74 -9.9 -3.61715 | opp_overlap 826596 826595 CATTGTTGGGAAGAA TGTCTCC AATT GGAGACA GATTGTTGATAACCT dnaG2 827199 - 826828 - | DnaG2 HRM2_07400 827898 - 827500 - | hypothetical protein HRM2_07410 828416 - 828829 + | hypothetical protein HRM2_07420 829095 - 829676 + | hypothetical protein dksA2 830104 - 829760 - | DksA2 TERM 904 830028 - 830039 + g 84 -4.4 -5.33866 | ATCAGCAGTTCATAG GACT CGAT AGTC TTTTTTATCGGTTTC HRM2_07440 830411 - 830199 - | hypothetical protein TERM 905 830246 - 830258 + g 83 -5.5 -5.18371 | CCGTCTCAAAGGATT CAGGG TCA CTCTG TTTTATTTTCTGCAC TERM 906 831700 - 831690 - g 79 -5.4 -5.0538 | TGCCATGTCAAAAAA TGGA TTT TCCA TCATAGCCCTCCCTT TERM 907 832139 - 832126 - g 71 -5.2 -4.52589 | TTTTTTTATAGAAAA CGGG TGCTTC CCCG TCGAGAAATCCAAAA TERM 908 832375 - 832365 - g 71 -5.4 -4.55798 | opp_overlap 832365 CATTGCAAAGGAAAA CGAT TTT ATCG GTTTTAAAGCTGTGG cat3 830638 - 832500 + | Cat3 TERM 909 832595 - 832644 + T 80 -3.7 -5.38951 | opp_overlap 832607, overlap 832607 832641 AAGTACTTCAGGTCT GTAAATGAAAAACCCTGCTTC AGCCATTG GAAGCAGGGTTTTTTATCAGG TTTTTTATCTGGCTT TERM 910 832632 - 832607 - T 100 -10.5 -4.98531 | opp_overlap 832595 832607 TCTGTAAATGAAAAA CCCTGCTTC AGCCATTG GAAGCAGGG TTTTTTATCAGGTTT TERM 911 832607 - 832632 + T 100 -10.5 -5.28826 | opp_overlap 832607, overlap 832595 TCTGTAAATGAAAAA CCCTGCTTC AGCCATTG GAAGCAGGG TTTTTTATCAGGTTT metH2 833468 - 832668 - | MetH2 TERM 912 832731 - 832747 + g 79 -8 -4.30576 | GAACTGATCATGACC CAGCAG CATGT CTGCTG TTTTAATGGTGGCCA TERM 913 832751 - 832765 + g 86 -2.8 -5.60993 | GCATGTCTGCTGTTT TAATGG TGG CCATGA TTTTTTTATCCAAAG mtmC 834288 - 833656 - | MtmC mttB3 835721 - 834300 - | MttB3 TERM 914 834790 - 834807 + g 81 -12.7 -3.30124 | TCTGTGAGCCCGCCG CCTGCCC TGGA GGGCAGG TTGTAGAACCTGGCC TERM 915 835071 - 835053 - G 71 -10.2 -3.18118 | opp_overlap 835051 835067, overlap 835051 835049 GGATGCGACAACACA GGCCTGGT TGT ACCTGGCC AGTTCAATGAGTGAG TERM 916 835648 - 835684 + g 82 -10.3 -3.90318 | opp_overlap 835655 835657, overlap 835657 GCCACACCTGTGTTT TTGAGAAGATCCATGGC AGC GTCATGGATTTTTTCCA TTTGTGCGGTGGTCA TERM 917 835657 - 835675 + g 100 -9.6 -5.24449 | opp_overlap 835655 835657, overlap 835648 GTGTTTTTGAGAAGA TCCATGGC AGC GTCATGGA TTTTTTCCATTTGTG opuD1 837283 - 835784 - | OpuD1 rocR 839049 - 837553 - | RocR TERM 918 839165 - 839181 + H 76 -7.9 -4.21936 | overlap 839149 ATTTGCTTGCCCCAT GCAGACC ATT GGTCGGC TTTTGGCGTTGTCGG TERM 919 839454 - 839479 + G 82 -3.9 -5.32882 | overlap 839455 839475 CCTTTGAAGCCTTTG GGCCGTGGTAT ATTT ATTCCATGGCA TTTTTTGTCATCCTG TERM 920 840135 - 840151 + G 85 -3.6 -5.38321 | TGAATATGGTGCTTT CGCTGG CACTA CTGGCG TTTTTTCTGATATTT opuD2 839261 - 840913 + | OpuD2 TERM 921 841558 - 841574 + G 71 -5.1 -4.58563 | AATGAAAAGAATCAC TCGTTCC GCT GGAAAGA TTATTTTTATCCTTC TERM 922 842322 - 842334 + G 79 -6.9 -4.72029 | overlap 842305 CTCTGACAGAGCAGC CGGCG GGG CGTCG TTTTCTTGGCTTGGC TERM 923 843392 - 843360 - g 73 -5 -4.7373 | gap 1, overlap 843362 843367 GTATTCCACGAAAAA TATT-GAATGAGAGG ATTG CCTCCCATCCCAACA AGGAAGATGCCCTTG TERM 924 844498 - 844514 + G 76 -4.4 -5.0538 | GGAAGAGCGGGAGAG CCTGGA GACAA TTCAGG TTTTTTCAGATGAGC TERM 925 844591 - 844577 - g 87 -4.2 -5.43866 | opp_overlap 844577 GAACCGGGAAAAAAA GCGGTT CGG AACAGC TATTTTCTGGCGGAA HRM2_07520 841544 - 845302 + | hypothetical protein TERM 926 845316 - 845338 + G 100 -16.4 -3.51329 | AGAACAAATGTTTTG GGCCCATGAT CAA ATCATGGGCC TTCTCCTTCAAGATA TERM 927 847063 - 847092 + G 71 -6.3 -4.42653 | opp_overlap 847059 GATATGCACAAGGTT GCCAACCTGATCA CCTC TGAACTGGTAGGC TTTTATGAATGGAAT TERM 928 848045 - 848034 - g 71 -5.8 -4.29153 | CTATGATAAAAAAGA GGGA TTAG TCCC ATATCAGCCGTTACT HRM2_07530 845308 - 848508 + | sensory signal transduction histidine kinase (PAS/PAC domain protein) TERM 929 849681 - 849703 + G 80 -3.4 -5.24129 | overlap 849684 GGTCATTCCTATTTC GACCCTGTTT CCA AAACAGGTTA TTTTTTCTACCCAGG TERM 930 849684 - 849700 + G 100 -9.5 -4.72201 | overlap 849681 CATTCCTATTTCGAC CCTGTTT CCA AAACAGG TTATTTTTTCTACCC TERM 931 849816 - 849826 + G 82 -6.8 -4.77567 | AGCAGTTGTCAGAGT TCCG GTG CGGA TTTTGTTCTGCGCCT HRM2_07540 848505 - 850052 + | hypothetical protein TERM 932 850412 - 850423 + G 78 -5.8 -4.79451 | TTATAATGGCAACCG GGTC TCTG GACC TTTTATGTTTGAAAT HRM2_07550 850125 - 852944 + | hypothetical protein TERM 933 853038 - 852997 - T 76 -10.3 -2.97613 | gap 2, overlap 852993 GAGCAAGCAAGCAGA CCAGGGCTGAAGCCTGCCG GGGTGA CGGCAGGCTTCAGA--TGG AAAAGGATGTTTCTG hflX 854520 - 853060 - | HflX TERM 934 854079 - 854092 + g 74 -2.3 -5.09426 | CATAGATGACAACAT TGGCG TGCA CGCTG TTTTTTGCCATTGGG TERM 935 854265 - 854279 + g 77 -10 -3.76413 | overlap 854261 854258 TTAATTTTCCTGCGC CCAGCA GGG TGCTGG TTTCCGGTTTTGGGC TERM 936 854835 - 854790 - R 73 -9.1 -3.56594 | gap 1, overlap 854793 GTAAATTTTGCTAAA TTATGTGCATCGCCTGGTGC CGAAGTC GC-CCAGGCAATGCACAGGA GCATGAATTATTGAT TERM 937 854832 - 854793 - R 100 -15.2 -2.90992 | gap 1, overlap 854790 AATTTTGCTAAATTA TGTGCATCGCCTGGTGC CGAAGTC GC-CCAGGCAATGCACA GGAGCATGAATTATT HRM2_07570 856123 - 854843 - | multiheme cytochrome family protein TERM 938 854966 - 854954 - G 76 -3.3 -5.21709 | GTTTACATGAAAAAA GGCCT GGT AGGTC CGCATCCGATGTTTC HRM2_07580 859089 - 856591 - | two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) TERM 939 857466 - 857497 + gr 73 -10.1 -2.96216 | opp_overlap 857466 857467, overlap 857472 857473 CTTCGGTCACATCAA GGGCAATGCCCCC GATCAG GGGGGCGTTTCTC TCTCTGGTGATGGGA TERM 940 857472 - 857491 + gr 79 -8.5 -4.18367 | opp_overlap 857466 857467, overlap 857466 857473 TCACATCAAGGGCAA TGCCCCC GATCAG GGGGGCG TTTCTCTCTCTGGTG TERM 941 857473 - 857490 + gr 74 -9.8 -3.10297 | opp_overlap 857466 857467, overlap 857472 857466 CACATCAAGGGCAAT GCCCCC GATCAG GGGGGC GTTTCTCTCTCTGGT TERM 942 858047 - 858084 + gr 90 -10.8 -3.98083 | gap 1 CGCCACCGTCCAGGG CTCATG-TGTCCGATTT CAACA AGATCGGGCAGCATGAG TTTCTCCATTGCCTC tyrA 860062 - 858929 - | TyrA HRM2_07600 860898 - 860194 - | hypothetical protein TERM 943 860866 - 860882 + g 76 -8 -4.27843 | overlap 860863 AAAGAGTTTTCCCAG GGCATG GGCCG CATGCC TTCTTTCTGTTTCCA TERM 944 861712 - 861699 - g 78 -2.3 -5.31275 | overlap 861700 GCCCAGCAGAAAAAA TCCGT AGAA ACGGG ACTTGCATTAAATTA thiJ 861174 - 861728 + | ThiJ TERM 945 862137 - 862151 + G 74 -11.4 -3.18264 | CCCAGGGGCTTGACG GCCTGG ATG CCAGGC TTGATGAATACCGGA fba1 861755 - 862801 + | Fba1 TERM 946 862805 - 862840 + T 73 -5.5 -4.63486 | gap 2, opp_overlap 862805 862807, overlap 862806 862807 862839 CTGGAGGGTTAGAAA TA-GG-GGGGAGGTTCC GGAA GAAACCTCCCCACCCTG TTTTATTCAAACAAT TERM 947 862838 - 862805 - T 81 -9.5 -3.87815 | opp_overlap 862805 862806 862807, overlap 862807 CTGGAGGGTTAGAAA TAGGGGGGAGGTTCC GGAA GAAACCTCCCCACCC TGTTTTATTCAAACA TERM 948 862806 - 862838 + T 77 -8.4 -3.93367 | gap 1, opp_overlap 862805 862807, overlap 862805 862807 TGGAGGGTTAGAAAT AGG-GGGGAGGTTCC GGAA GAAACCTCCCCACCC TGTTTTATTCAAACA TERM 949 862836 - 862807 - T 100 -14.3 -3.52906 | opp_overlap 862807 862806 862805, overlap 862805 GGAGGGTTAGAAATA GGGGGGAGGTTCC GGAA GAAACCTCCCCAC CCTGTTTTATTCAAA TERM 950 862807 - 862837 + T 86 -11.9 -2.95538 | gap 1, opp_overlap 862805 862807, overlap 862806 862805 GGAGGGTTAGAAATA GG-GGGGAGGTTCC GGAA GAAACCTCCCCACC CTGTTTTATTCAAAC fadD2 864492 - 862843 - | FadD2 HRM2_07640 864648 - 864935 + | hypothetical protein TERM 951 864978 - 865019 + T 73 -3.7 -5.055 | opp_overlap 864978 GGCGTTGCTTCAAAA TTCTGAAACCCTCATGTAC AGAA GTACGCTCCGGTTTCAGAA TTTTTTGCGCCTTGC HRM2_07650 865765 - 865100 - | hypothetical protein TERM 952 866267 - 866290 + r 73 -8.2 -3.61268 | opp_overlap 866252 866267 GTAACGCAATCAAAA CGTTACCTGA TGGT TAAGGTAACG TTTGCGAATTACATG TERM 953 866290 - 866267 - R 87 -8.2 -4.45664 | opp_overlap 866267, overlap 866252 GTAACGCAATCAAAA CGTTACCTGA TGGT TAAGGTAACG TTTGCGAATTACATG HRM2_07660 868317 - 866299 - | hypothetical protein TERM 954 867848 - 867825 - G 77 -9.6 -3.71848 | GTTTTTCAGCAATAA CGGCCATG TCTTCTTC CATGGCCG CAAGCAGGGTTTTGC TERM 955 867970 - 867980 + g 83 -3.2 -5.4505 | GTTCAGGGCGTCCAG CTGT TCC ACGG TTTTTTCTTGAAAAC btuB1 870264 - 868351 - | BtuB1 TERM 956 870371 - 870342 - H 100 -11.5 -5.0916 | opp_overlap 870342 CGTTCAATATAAAAA GCCCCTAACCGAT GGGT ATCGATCAAGGGC TTCCCTTTCTGTCCT TERM 957 870985 - 870959 - H 100 -9.4 -4.62783 | opp_overlap 870963, overlap 870962 870963 TATTTATGGGAAAAA GGATCCCCTGAT CAC ATCAGGGGTTTC AATACGGGATTCCCT TERM 958 870982 - 870962 - H 76 -9.7 -3.25166 | opp_overlap 870963, overlap 870959 870963 TTATGGGAAAAAGGA TCCCCTGAT CAC ATCAGGGGT TTCAATACGGGATTC TERM 959 870963 - 870981 + H 100 -13.2 -3.65199 | opp_overlap 870962 870959 870963 TATGGGAAAAAGGAT CCCCTGAT CAC ATCAGGGG TTTCAATACGGGATT TERM 960 870981 - 870963 - H 90 -13.2 -2.54617 | opp_overlap 870963, overlap 870962 870959 TATGGGAAAAAGGAT CCCCTGAT CAC ATCAGGGG TTTCAATACGGGATT TERM 961 870995 - 871022 + H 100 -18.6 -5.69262 | opp_overlap 870990 GGTTTCAATACGGGA TTCCCTGCCTTG ATTT CAAGGCAGGGAA TTTTTATTTTTATGA cbiK1 871130 - 872086 + | CbiK1 TERM 962 872109 - 872135 + F 100 -16 -3.87869 | opp_overlap 872092 872112 ATTCAGCACCCGATA TGATGGGGGGAT TAA ATCCCTCCATCA TTTATCAAAAATTGC TERM 963 872132 - 872112 - f 71 -9.7 -2.63913 | opp_overlap 872109 CAGCACCCGATATGA TGGGGGGAT TAA ATCCCTCCA TCATTTATCAAAAAT HRM2_07690 872176 - 872445 + | hypothetical protein TERM 964 872653 - 872663 + GF 79 -8.2 -4.09243 | CATTCGAACCAGCAT GGGG CTG CCCC TTTTAACCGCCTATG cbiK2 872339 - 873118 + | CbiK2 TERM 965 873224 - 873205 - f 70 -10 -2.52464 | overlap 873208 CGTCTTTCCAATGGA CAACGCCT TCAC AGGCGTCG AGGAAAAAGGAACAA TERM 966 873337 - 873327 - g 82 -8.2 -4.57569 | opp_overlap 873324, overlap 873315 TGAGGGGGTTAAAAA CGCC CTT GGCG GTCTGCATTCAGCAA racD2 873244 - 873948 + | RacD2 TERM 967 873999 - 874053 + T 86 -12.2 -3.02591 | opp_overlap 874013 874017, overlap 874002 874017 TCATCTTGGCGATGT CTGTTTTTACACCAGGAACTGAAGGT GAA GCCGTCAGTTCCTGGTGTGCAGGTCG TATGATTTAGATCAT TERM 968 874002 - 874050 + T 100 -14.7 -2.73408 | opp_overlap 874013 874017, overlap 873999 874017 TCTTGGCGATGTCTG TTTTTACACCAGGAACTGAAGGT GAA GCCGTCAGTTCCTGGTGTGCAGG TCGTATGATTTAGAT TERM 969 874039 - 874013 - T 76 -10.9 -2.62184 | opp_overlap 874002 873999 874017, overlap 874017 TCTGTTTTTACACCA GGAACTGAAGG TGAAG CCGTCAGTTCC TGGTGTGCAGGTCGT atoB1 875310 - 874060 - | AtoB1 acd1 877178 - 875331 - | Acd1 TERM 970 876388 - 876411 + g 76 -6 -4.63218 | gap 1, overlap 876389 AGGGATAGACTGCAT G-TGGGGCTTC CGT GGAGTCCCATC TTTTCTTCAACGCCC TERM 971 876389 - 876409 + g 78 -9.7 -3.93367 | overlap 876388 GGGATAGACTGCATG TGGGGCTTC CGT GGAGTCCCA TCTTTTCTTCAACGC TERM 972 877058 - 877072 + g 78 -5.7 -4.76075 | TTGCCTCCTTGACGA CCATG TCTGC CATGG TTTTGTTGATGTCCT HRM2_07740 877796 - 877203 - | transcriptional regulator (TetR family protein) HRM2_07750 877968 - 878225 + | hypothetical protein TERM 973 879390 - 879372 - g 75 -8.8 -3.91716 | TGATGGCGGAAAGAA CCTCAGAC ATG GTCTGTGG CAAACTTGGCATTTC TERM 974 879471 - 879516 + G 71 -6 -4.31433 | gap 1, overlap 879504 GATGGACCGAGCCAG GGGTTGCCC-TGGGCCAGAAG TTTTT CTCCCGGACCAAGGGAGACCC TTTGTTGTGCGAATG TERM 975 879619 - 879586 - g 79 -6.7 -4.60487 | gap 1, overlap 879588 CACCATTCGGAAAAA CTGGGCAA-AGCCAGA CCT TTTGGCCATTGCCCTG AGAAGTCGTATTGGT TERM 976 879721 - 879735 + G 71 -7 -4.20516 | AGGGCCCCAGGGGGC CGACGG GCT CCGGCG TTTCTTAAATGAACG glpA2 878297 - 879901 + | GlpA2 glpB2 879898 - 881187 + | GlpB2 TERM 977 882121 - 882137 + G 86 -8 -4.63932 | TTTTCAGCCTCACGG CCTGCA CAGAT TGCAGG TTTTGTTCACAGGTC TERM 978 882355 - 882372 + G 70 -9.9 -3.30771 | ACCTGGTTCGTTTGT GGGAATC GGCT GATTCCC TTATGGAACATCTAG TERM 979 882651 - 882633 - g 79 -5.2 -5.00616 | CGGCTGGGGAAAAAA GAGATGGC CAC GGCATCCC CCATGGTATGGAATT TERM 980 883109 - 883128 + G 70 -2 -5.01732 | opp_overlap 883106 GGATAAAATTGACCG GTTGCTGG CAGA CCAGGGGC TTTTTTACCCAGGTT TERM 981 883285 - 883264 - g 76 -4.5 -5.0538 | gap 1, opp_overlap 883278 883282, overlap 883266 TGGCACCTGAAAAAA TAGCACTCCA GCA TGGA-TGCCA CGCCCTGCGTCCCTT TERM 982 883475 - 883463 - g 75 -10.5 -3.3854 | overlap 883472 AATGATTACCCATAA GGCGG AAA CCGCC AGTCGGGAAGGCGCT hdrF2 881184 - 883685 + | HdrF2 TERM 983 884686 - 884698 + G 74 -4.7 -4.84359 | CATCCTGGGATTCAT GGCCG CTT CCGCC TTTTTGTCGGCGTGG HRM2_07790 884291 - 885817 + | predicted Na(+)-dicarboxylate cotransporter (solute carrier family 13 protein) TERM 984 886548 - 886560 + G 74 -7.7 -4.19324 | overlap 886539 886538 GCACTGCAGGTGGAC GATCC GCC GGATC TTATTTATATGGTTT HRM2_07800 885849 - 887069 + | branched-chain ABC-type amino acid transporter, substrate-binding protein uspA11 887134 - 887619 + | UspA11 TERM 985 888337 - 888317 - g 72 -9.7 -3.36515 | opp_overlap 888333, overlap 888315 CCCCAGTTTGAAACA GGCCTGG GCCGGTT CCAGGCC AAAGATGGCCATGTT TERM 986 888889 - 888923 + G 71 -10.7 -3.17325 | overlap 888887 AAGCCAGCTTGCCCA CCTTTACGGGTCGTC GGCCG GACGGCCCGTGAGCG TCTATTATCAGGACT HRM2_07830 888059 - 889138 + | predicted flavin-containing monoamine oxidase HRM2_07840 889150 - 890637 + | NADPH-dependent FMN reductase HRM2_07850 891269 - 890634 - | hypothetical protein mcpA1 893464 - 891464 - | McpA1 TERM 987 892766 - 892783 + g 73 -2.7 -5.0538 | overlap 892768 AAGTGTGGTGGCGTC AAGTTGA AGAA TCAACTC TTTTTTGGGGTGGGC TERM 988 893047 - 893031 - G 72 -8 -3.90744 | opp_overlap 893034 GCCGTCTGGAAATAA TCCCTG TCCGC CAGGGA CAGTTTCATGGTCCT TERM 989 893034 - 893050 + g 72 -8 -3.81287 | opp_overlap 893031 GTCTGGAAATAATCC CTGTCC GCCAG GGACAG TTTCATGGTCCTGTA HRM2_07870 893938 - 893489 - | hypothetical protein TERM 990 894123 - 894104 - R 75 -8.6 -3.89614 | opp_overlap 894104 GTGAATTCCCATAAA CAGGAACA GATT CGTTCCTG TTTATGGGAATCAGG TERM 991 894104 - 894123 + r 72 -7.9 -3.87815 | opp_overlap 894104 GTGAATTCCCATAAA CAGGAAC AGATTC GTTCCTG TTTATGGGAATCAGG HRM2_07880 895587 - 894184 - | sigma-54 dependent DNA-binding response regulator HRM2_07890 898230 - 895591 - | two domain sensory box histidine kinase (methyl-accepting chemotaxis transducer/Ntr-family protein) TERM 992 896319 - 896329 + g 70 -2.4 -4.93877 | opp_overlap 896319 CGAGTTCTACAGCAA GGAC GCC GCCC TTTTCTTTCATGGCA TERM 993 896362 - 896388 + g 76 -12.4 -2.97747 | opp_overlap 896364, overlap 896364 896366 GGCGGCATTGTTGAA CAGGTTCATCAG CAC CTGGTGAATCTG TGTCTGGTCTGCCAG TERM 994 898083 - 898095 + g 80 -3.4 -5.37345 | overlap 898073 CATTATCCGTCAACT GAAG GATGG CTTC TTTTTTCTGATTCAA TERM 995 898434 - 898409 - H 71 -4.7 -4.64766 | TTTACACGTCAAAAA TTGCCCTGACA CCTT TACCAGGGAAA AGAATAATGGAAAAA TERM 996 898475 - 898459 - g 74 -3.6 -4.95854 | overlap 898460 GAAAAAAGTGAAAAA GTGGCC CTCCT GGCCAT CGGGGTTAACCTGCT TERM 997 899452 - 899421 - g 72 -3.6 -4.86773 | overlap 899415 GAAAATTATCAAAAA TCCCTTTGTCACAG TGGA CCACGGCAAGGGGA TTCTGGTTGCAGAAC TERM 998 899517 - 899529 + G 70 -4.7 -4.71223 | overlap 899517 CAGGGAAACCTTTGA GGGCC GGG GCCCC TTTTATGTGTTCTCC HRM2_07900 898441 - 899622 + | cation-efflux family protein TERM 999 900084 - 900068 - g 73 -9.4 -3.78329 | opp_overlap 900066, overlap 900062 GTCGATCAAGGCAAA GGGCCA CCCCC TGGCCC GGATTTATAAGGAAT thrS1 899691 - 900104 + | ThrS1 TERM 1000 900184 - 900204 + F 71 -4.7 -4.72386 | overlap 900188 TAATTCTCCCCGGAT GAATTTTCG GAG CGGAATTTC TTTTTAAATCCTTTA TERM 1001 900188 - 900200 + F 71 -4.1 -4.89063 | overlap 900184 TCTCCCCGGATGAAT TTTCG GAG CGGAA TTTCTTTTTAAATCC HRM2_07920 900807 - 901232 + | hypothetical protein TERM 1002 902381 - 902371 - g 85 -4 -5.42198 | GTTCAAAAAAGAAAA TCAA AAA TTGA CGGCTGGCTGTTTTT TERM 1003 902970 - 902991 + G 78 -3.7 -5.07053 | opp_overlap 902986, overlap 902971 CTCTGTCGTAACTTG TGTTGGTGT GAAC GTACCAACG TTTTTTGGCATCGTT opuD3 902338 - 903861 + | OpuD3 TERM 1004 904145 - 904087 - f 76 -7.8 -4.17491 | gap 3, opp_overlap 904095 904097 904098 904101, overlap 904099 ATTAAAGCGTTAAAA GATGC-ATTCAA-ACAGGCACTGACACAA CATT TTGTGTCAGTGCCTGCCTTGTTTCGCAT- ATAAAATTTCTATTC TERM 1005 904095 - 904137 + F 100 -17.3 -3.63805 | gap 1, opp_overlap 904087 904099, overlap 904097 904098 904101 GTTAAAAGATGCATT CAA-ACAGGCACTGACACAA CATT TTGTGTCAGTGCCTGCCTTG TTTCGCATATAAAAT TERM 1006 904097 - 904134 + F 100 -15.7 -3.95378 | opp_overlap 904087 904099, overlap 904095 904098 904101 TAAAAGATGCATTCA AACAGGCACTGACACAA CATT TTGTGTCAGTGCCTGCC TTGTTTCGCATATAA TERM 1007 904098 - 904133 + F 100 -19.2 -2.96745 | opp_overlap 904087 904099, overlap 904097 904095 904101 AAAAGATGCATTCAA ACAGGCACTGACACAA CATT TTGTGTCAGTGCCTGC CTTGTTTCGCATATA TERM 1008 904132 - 904099 - f 100 -22.7 -3.68908 | opp_overlap 904098 904097 904095 904101, overlap 904087 AAAGATGCATTCAAA CAGGCACTGACACAA CATT TTGTGTCAGTGCCTG CCTTGTTTCGCATAT TERM 1009 904101 - 904130 + F 100 -19.5 -2.71369 | opp_overlap 904099 904087, overlap 904098 904097 904095 AGATGCATTCAAACA GGCACTGACACAA CATT TTGTGTCAGTGCC TGCCTTGTTTCGCAT HRM2_07940 904260 - 905393 + | putative (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit TERM 1010 905559 - 905539 - g 72 -3.9 -4.89477 | opp_overlap 905540 905548 905550, overlap 905540 CCGCCAACAATAAAA TCCCCAG CCTGTAC CTGGGGT ATATTTTTACCACCC TERM 1011 905548 - 905562 + G 71 -5 -4.56597 | opp_overlap 905540 905539, overlap 905540 905550 ATAAAATCCCCAGCC TGTACC TGG GGTATA TTTTTACCACCCACC HRM2_07950 905433 - 906569 + | ABC-type transporter, substrate binding protein TERM 1012 906921 - 906937 + G 79 -6.6 -4.62302 | ACTATGGACTGGCTT TCCGTT TTTTT AACGGA TTTTTAAGCCTGTTC HRM2_07960 906575 - 907477 + | ABC-type transporter, membrane spanning protein TERM 1013 907873 - 907824 - g 100 -2.8 -5.93809 | gap 1, opp_overlap 907825 907833, overlap 907825 TGTTGACAAAAAAAA GCGCCACCATGATG-CCATGG GCTACATTT CAATGGTCAACATGGAGGCGT TTAAGGACGCATACC HRM2_07970 907477 - 908259 + | ABC-type transporter, ATP-binding protein TERM 1014 908599 - 908568 - T 100 -11.1 -5.27938 | gap 1, opp_overlap 908565 908570 908572 AGTTGTAAACAAAAA TAGACCATT-CGCT AAAAA AGCGTAATGGTCTA TCCTGATTTAATTAT TERM 1015 908570 - 908597 + T 71 -9.3 -2.90456 | gap 1, opp_overlap 908568, overlap 908565 908572 TTGTAAACAAAAATA GACCATT-CGCT AAAAA AGCGTAATGGTC TATCCTGATTTAATT HRM2_07980 909471 - 908725 - | predicted transposase HRM2_07990 911083 - 909395 - | hypothetical protein TERM 1016 909553 - 909583 + gr 80 -2.4 -5.47914 | TCTGGTTATGCTGAA GGATTTGCTTTGCC ATG GGCATGGAAAGACC TTTTTTATAATTTTT TERM 1017 909649 - 909665 + gr 76 -5.1 -4.83169 | GCTCCAAAAAGGCGA TGATCTG ATC CAGCTCA TTTTTGTCCGGCAAT TERM 1018 910927 - 910941 + gr 86 -5.6 -5.28683 | opp_overlap 910918 CAAGTAGGAGTGGCC CCGGAA TAA TGCCGG TTTTTTGATATTGAT TERM 1019 910976 - 910993 + gr 80 -2.6 -5.52023 | overlap 910977 GTAATATTTTTTACT TGCTCG TTTGGC CGAGCC TTTTTTGTTCATGAT HRM2_08000 911651 - 911070 - | hypothetical protein TERM 1020 911437 - 911420 - G 74 -9.9 -3.61715 | opp_overlap 911419 911418 CATTGTTGGGAAGAA TGTCTCC AATT GGAGACA GATTGTTGATAACCT dnaG3 912022 - 911651 - | DnaG3 HRM2_08020 912721 - 912323 - | hypothetical protein TERM 1021 913004 - 913024 + H 71 -6.7 -4.18494 | overlap 913005 TGTTTTAAATGCTCA GCCGTGGGA AGA TCCCCCGGG TTTTGAGTGGCAGTG TERM 1022 913005 - 913023 + H 77 -10.2 -3.10775 | overlap 913004 GTTTTAAATGCTCAG CCGTGGGA AGA TCCCCCGG GTTTTGAGTGGCAGT HRM2_08030 913216 - 913902 + | hypothetical protein HRM2_08040 914906 - 913938 - | NAD-dependent epimerase/dehydratase family protein TERM 1023 914620 - 914632 + g 73 -5.5 -4.62203 | AACATATTTATTGCA CCTGT AAC GCAGG TTTTAATTGTTTGAA HRM2_08050 915520 - 915714 + | hypothetical protein TERM 1024 915933 - 915898 - T 76 -7.8 -4.11751 | gap 1, opp_overlap 915899 915903 915909 915911, overlap 915899 ATCAAGCCCGGAAAA CTGATTGGAAACAGGTT GCA AACCTATTTCC-ATCAT TGTGAATGTGCAAAT TERM 1025 915932 - 915899 - T 83 -11.3 -3.06569 | gap 1, opp_overlap 915899 915903 915909 915911, overlap 915898 TCAAGCCCGGAAAAC TGATTGGAAACAGGTT GCA AACCTATTTCC-ATCA TTGTGAATGTGCAAA TERM 1026 915899 - 915932 + T 71 -9.1 -3.39327 | gap 1, opp_overlap 915899 915898, overlap 915903 915909 915911 TCAAGCCCGGAAAAC TGATTGGAAACAGGTT GCA AACCTATTTCC-ATCA TTGTGAATGTGCAAA TERM 1027 915903 - 915929 + T 77 -11 -2.85712 | opp_overlap 915899 915898, overlap 915899 915909 915911 GCCCGGAAAACTGAT TGGAAACAGGTT GCA AACCTATTTCCA TCATTGTGAATGTGC HRM2_08060 917308 - 915959 - | FAD/NADH-dependent pyridinepyridine nucleotide-disulphide oxidoreductase TERM 1028 916855 - 916879 + g 100 -4.2 -5.80951 | TGGTTATGAATCCCG CCCCGATAAA AATCA TTTTCCGGGG TTTTTTCTTTTCCAT TERM 1029 917026 - 917044 + g 80 -2.3 -5.43621 | opp_overlap 917020, overlap 917028 CGTAGGGAATCTCCC GGGCGTT GGAGA GACGCAC TTTTTTCTGCTTTGT HRM2_08070 917918 - 917421 - | hypothetical protein TERM 1030 917956 - 917973 + r 71 -4.1 -4.91109 | opp_overlap 917956 AATTCAGCCTATAAG CAGCAGG ATCA TTTGCTG TTTTTATGCTGCCGG HRM2_08080 919174 - 918404 - | transcriptional regulator (TetR family protein) TERM 1031 918891 - 918879 - G 83 -3.3 -5.40014 | opp_overlap 918883, overlap 918881 918882 AAATAATAATAAAAA GACCC CTT GGGTA CGCCAACGGAATCAA TERM 1032 919217 - 919207 - R 70 -5.4 -4.52669 | opp_overlap 919210, overlap 919210 AAGAAGGGAAATAAA GGAT TTC ATCC ATGAAAATATCTTTT TERM 1033 919354 - 919318 - R 78 -9.6 -3.66356 | gap 2, opp_overlap 919320 919322 919347, overlap 919322 ATGGGCAAGGGCAAA GCAA--GCCAGGAAGGCC TGG AACCTTCCTGGCTGTTGC ATTCAGCTTCCATCT TERM 1034 919320 - 919350 + r 79 -11.2 -3.19246 | opp_overlap 919318 919322, overlap 919322 919347 GGGCAAGGGCAAAGC AAGCCAGGAAGG CCTGGAA CCTTCCTGGCTG TTGCATTCAGCTTCC TERM 1035 919322 - 919348 + r 100 -13.8 -3.15621 | opp_overlap 919318 919322, overlap 919320 919347 GCAAGGGCAAAGCAA GCCAGGAAGG CCTGGAA CCTTCCTGGC TGTTGCATTCAGCTT TERM 1036 919348 - 919322 - R 100 -15.2 -3.54489 | opp_overlap 919322 919320 919347, overlap 919318 GCAAGGGCAAAGCAA GCCAGGAAGGCC TGG AACCTTCCTGGC TGTTGCATTCAGCTT pabB 921660 - 919357 - | PabB TERM 1037 920745 - 920763 + g 73 -5.2 -4.72631 | GTTTTTGATCTTCTG CCCGGG TTTTTCC CCTGGG TTTTGTTCCCTTGAT TERM 1038 921055 - 921085 + g 82 -11.2 -3.67296 | opp_overlap 921046 TTTAAACCCCCTTTG GTCACCACAGAAAG TTC CTTTTTGCGGTGGC TTTGAATCCATAATA TERM 1039 921246 - 921257 + g 70 -4.4 -4.67168 | GGGGAAGACCCAGGT CATC TACG GATG TTTTTGGCAGTTTTT pabA 922303 - 921647 - | PabA TERM 1040 922355 - 922330 - R 100 -13.4 -6.20267 | opp_overlap 922330 CCAAAAATAAAAAAA GCCATCCAGA TACAAG TCTGGATGGC TTTTGCCTATTGCAT TERM 1041 922330 - 922355 + r 100 -14.1 -4.28656 | opp_overlap 922330 CCAAAAATAAAAAAA GCCATCCAGAT ACAA GTCTGGATGGC TTTTGCCTATTGCAT TERM 1042 922398 - 922414 + r 81 -10.9 -3.34962 | TTTTATCTGCTCTAA TTGGCCA TTT TGGCCAA TTATGAAATATAAAA HRM2_08110 923960 - 922536 - | multidrug resistance protein (efflux pump/antiporter) TERM 1043 922865 - 922851 - G 76 -2.8 -5.0916 | GGGGGAAGAGAAAAA GGCA AAACCGA TGCC CAGAAGTGAGAGAAT HRM2_08120 924264 - 924968 + | hypothetical protein aspC1 925200 - 926534 + | AspC1 TERM 1044 926563 - 926573 + F 87 -8.2 -4.57073 | overlap 926547 GGTGACAATACCGAT GGGG TCA CCCC TTTTTCCCAGAGATG TERM 1045 926681 - 926714 + F 80 -3.9 -5.40474 | gap 1, overlap 926688 ACAAAAGGTTGTTCC TGTTTAAGGTCGGG TGGAGTT CCCGGCCTTTA-CA TTTTTTTAAGGCCAT TERM 1046 926688 - 926708 + F 73 -7.5 -4.10795 | overlap 926681 GTTGTTCCTGTTTAA GGTCGGG TGGAGTT CCCGGCC TTTACATTTTTTTAA TERM 1047 927759 - 927745 - g 83 -5.6 -5.14563 | opp_overlap 927744 927745 927752 CTCCCCAGTAAAAAA CCCCAT GTC AGGGGG CTTGATATTGCCGGT TERM 1048 928219 - 928197 - g 86 -7 -4.95155 | opp_overlap 928200, overlap 928198 CTCACATCAGAAAAA CGATCTGAAC AAT GGTCAGATCA TTGCCATTGGAACCG rsbP 926752 - 928452 + | RsbP HRM2_08150 928449 - 928649 + | hypothetical protein TERM 1049 929075 - 929096 + G 82 -3.7 -5.31877 | overlap 929077 GTATTATATCAATCC CATGATCAA CGTA TTGATCGGG TTTTTTCTGCTGGGT rarD 928752 - 929630 + | RarD TERM 1050 929926 - 929947 + G 95 -2.1 -6.09196 | overlap 929928 CTACACCCTCCCGAT CCTGGTTGC GCTT GCCGCCATG TTTTTTTATTTTGCC HRM2_08170 929627 - 930517 + | two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) HRM2_08180 931105 - 930752 - | transcriptional regulator (GntR family protein) TERM 1051 931224 - 931276 + r 70 -3.5 -4.75404 | opp_overlap 931230 931232, overlap 931229 931230 CAGCGGTTTATAAAA CAAGAATACCCTGTGCATGGA TAGTGATGAAT TCTATGCACAGGGCAGGTTTG TTTTTAATGGCGTTT TERM 1052 931270 - 931230 - R 79 -7.7 -4.26938 | opp_overlap 931229 931224 931230, overlap 931232 TTTATAAAACAAGAA TACCCTGTGCATGGA TAGTGATGAAT TCTATGCACAGGGCA GGTTTGTTTTTAATG TERM 1053 931268 - 931232 - R 70 -8.1 -3.71944 | opp_overlap 931230 931229 931224, overlap 931230 TATAAAACAAGAATA CCCTGTGCATGGA TAGTGATGAAT TCTATGCACAGGG CAGGTTTGTTTTTAA HRM2_08190 932392 - 931313 - | aminotransferase, class V (putative purine catabolism protein PucG) HRM2_08200 933144 - 932425 - | transcriptional regulator (GntR family protein) TERM 1054 932504 - 932523 + g 81 -5.7 -4.90778 | gap 1, overlap 932491 932505 TGTCTGCGCGTTAAC G-CGCCGA TGGTC TCGGCGTC TTTTCTTTCAATGCA TERM 1055 932505 - 932521 + g 77 -9.4 -4.07285 | overlap 932491 932504 GTCTGCGCGTTAACG CGCCGA TGGTC TCGGCG TCTTTTCTTTCAATG TERM 1056 935236 - 935224 - gH 100 -4.8 -6.02914 | opp_overlap 935224 935232, overlap 935225 TTGAGATAAAAAAAA TCGG TTCTG CCGA GCCGCCTTCTGTAAA HRM2_08210 934059 - 935939 + | hypothetical protein TERM 1057 936379 - 936368 - gf 70 -4.4 -4.614 | TCCAAGGAGATAAAA CTGA TCGG TCAG GCCAAAGGAAAAACA HRM2_08220 935882 - 936472 + | hypothetical protein HRM2_08230 936475 - 937032 + | hypothetical protein HRM2_08240 937931 - 937071 - | hypothetical protein TERM 1058 937757 - 937705 - G 85 -3.5 -5.39905 | opp_overlap 937708, overlap 937706 ATGAAAGAAGAAAAA TCATCGGTAAAAACAAATTCCAG CCGCCCC CTGGCATTGGTTTGTACCCATGT TCCGGTCAGCCGGTT ctpA1 939175 - 938087 - | CtpA1 TERM 1059 939106 - 939069 - G 100 -17.1 -5.00884 | opp_overlap 939076, overlap 939071 ACGGCCTCGAAAAAA GTCAGCATGGCCTGG TTGTTGGT CCAGGCCATGCTGTC GGCATGGGCCGGGCA TERM 1060 939104 - 939071 - G 100 -18.3 -2.75708 | opp_overlap 939076, overlap 939069 GGCCTCGAAAAAAGT CAGCATGGCCTGG TTGTTGGT CCAGGCCATGCTG TCGGCATGGGCCGGG HRM2_08260 939677 - 939180 - | Serine/threonine-protein kinase MRCK alpha (CDC42-binding protein kinase alpha) TERM 1061 939432 - 939452 + g 72 -3.9 -4.81685 | CGCAAGTTCTTTTTT CAGGGCC TCATGCC GGGCCTG TTTTTCCTGCTTGCT HRM2_08270 940369 - 939695 - | hypothetical protein HRM2_08280 942190 - 940394 - | hypothetical protein TERM 1062 942020 - 942042 + g 91 -4.3 -5.65177 | gap 1, overlap 942023 GGCCACAGGCAGTTT CA-ACTCAAA TTTT TTTGAGTCTG TTTTTTTGTCCGTGT HRM2_08290 943778 - 942201 - | hypothetical protein TERM 1063 943115 - 943125 + g 74 -8.2 -4.07246 | GGTTGGGTTTGAGGC GGCC CAT GGCC TTTAATTTGCCGTGG TERM 1064 943530 - 943516 - G 74 -7.1 -4.36914 | opp_overlap 943528 CCCTGGCCCAGAAAA GAGCC GCTCA GGCTC ACCTCTGTGGGATGT HRM2_08300 945577 - 943778 - | ABC-type transporter, permease protein TERM 1065 944053 - 944041 - G 74 -4.7 -4.78848 | GGGGGAAACACAAAA GCCCG CCC CGGCC AAAACCGATAAGGGC TERM 1066 944413 - 944425 + g 77 -10.5 -3.53012 | GCTGGGGTGGCACCA GGCCG TGG CGGCC TTTGGAGAACACCCC HRM2_08310 946302 - 945574 - | ABC-type transporter, ATP-binding protein HRM2_08320 948497 - 946314 - | predicted serine/threonine protein kinase PpkA TERM 1067 946389 - 946423 + g 83 -8.7 -4.28432 | overlap 946370 CAGGGCGACCCAGCC TTCGGGCCTGTCA TGGATGGAT TGATAGGCCTGAA TTTTGGATTCCAGTT TERM 1068 946772 - 946813 + g 78 -10 -3.90112 | opp_overlap 946763 946792 946793, overlap 946773 CAACCAGGTCCTTGT CCGTTGCCCAGGCCACAA TATCCC TGGGGGCCTGGGCACCGC TTTGCTTACCCACCC TERM 1069 946773 - 946812 + g 80 -13.5 -2.93853 | opp_overlap 946792 946793, overlap 946772 AACCAGGTCCTTGTC CGTTGCCCAGGCCACAA TATCCC TGGGGGCCTGGGCACCG CTTTGCTTACCCACC TERM 1070 946907 - 946927 + g 86 -11.1 -3.97388 | CGCTCTCCTCTGCCA CCGGCAACA CCC TGGTGCCGG TTTCTGGTGCGGTCT TERM 1071 948852 - 948838 - g 70 -4.2 -4.68103 | TCAACGGGAAGAAAA GCAAGT TGG ACCCGC TTGTGGGGTGGCGTG HRM2_08330 948695 - 948919 + | hypothetical protein HRM2_08340 949499 - 948912 - | hypothetical protein TERM 1072 949183 - 949193 + g 79 -5.4 -4.9251 | TAATAGTCATTACCC GTGT TAT ACAC TTTTCGTTTTTTCTT TERM 1073 949606 - 949621 + r 86 -3.2 -5.72622 | opp_overlap 949603 ACGTTTCAAAATCAC CGGC TTTCCCGT GCCG TTTTTTATTTGTCAC HRM2_08350 950963 - 949626 - | hypothetical protein HRM2_08360 953275 - 950960 - | hypothetical protein HRM2_08370 954087 - 953389 - | TPR repeat protein HRM2_08380 954617 - 954084 - | hypothetical protein HRM2_08390 956338 - 954983 - | transposase (IS4 family protein) TERM 1074 955399 - 955411 + g 84 -4.8 -5.24129 | CTGTTGATAAAAGGG CGAG CCATC CTCG TTTTTTATCACAGGG HRM2_08400 956726 - 956445 - | hypothetical protein TERM 1075 957181 - 957137 - H 72 -9.4 -3.19563 | opp_overlap 957139 957144, overlap 957139 957144 CAGATACGATGAATA TACAAAACCCCATTTCTCAA GAATA CTGAGTGATGGGGTTTTGTT GTTTGCTGGCAGCGT TERM 1076 957179 - 957139 - H 86 -12 -3.15407 | opp_overlap 957139 957144, overlap 957137 957144 GATACGATGAATATA CAAAACCCCATTTCTCAA GAATA CTGAGTGATGGGGTTTTG TTGTTTGCTGGCAGC TERM 1077 957139 - 957179 + H 100 -13.5 -4.00042 | opp_overlap 957139 957137 957144, overlap 957144 GATACGATGAATATA CAAAACCCCATTTCTCA AGAATAC TGAGTGATGGGGTTTTG TTGTTTGCTGGCAGC TERM 1078 957144 - 957174 + H 95 -7.6 -5.02606 | opp_overlap 957139 957137 957144, overlap 957139 GATGAATATACAAAA CCCCATTTCTCA AGAATAC TGAGTGATGGGG TTTTGTTGTTTGCTG TERM 1079 957174 - 957144 - H 77 -6.1 -4.6955 | opp_overlap 957144 957139, overlap 957139 957137 GATGAATATACAAAA CCCCATTTCTCAA GAATA CTGAGTGATGGGG TTTTGTTGTTTGCTG TERM 1080 957295 - 957283 - H 78 -10.5 -3.3164 | overlap 957284 AACGTATCTGTATAA CCGGC ATG GCCGG AGCGAGGTATGGCTC TERM 1081 957321 - 957284 - H 71 -9.7 -2.58663 | overlap 957283 ACGTATCTGTATAAC CGGCATGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AACTTTGAAACACCT TERM 1082 957584 - 957595 + G 70 -3 -4.82855 | ATGATTATTTGCGAG GATT ATTT AATC TTTTTGACTTTAATA TERM 1083 957658 - 957674 + G 76 -6.5 -4.51847 | ATAACATTAATCTTT GCCAGCA TTA TACTGGC TTTTATCACTTATTT HRM2_08410 957460 - 958173 + | multidrug resistance protein (efflux pump/antiporter) TERM 1084 958675 - 958659 - T 100 -9.4 -5.31275 | opp_overlap 958659 TCTGATGACAAAAAA CCCCCA ATTGG TGGGGG TTTTGAGATAGATTT TERM 1085 958659 - 958675 + T 85 -9.4 -4.15854 | opp_overlap 958659 TCTGATGACAAAAAA CCCCCA ATTGG TGGGGG TTTTGAGATAGATTT gltL1 959454 - 958729 - | GltL1 gltK1 960111 - 959455 - | GltK1 TERM 1086 959738 - 959760 + g 83 -9.8 -4.15453 | opp_overlap 959732 959743, overlap 959743 959755 959758 TAGGTAAAACCGCTG GAATAGGCGG CTT CCGCCTGTCC TTTTGGGATGGATTG TERM 1087 959755 - 959743 - G 71 -10.5 -3.03903 | opp_overlap 959738 959743, overlap 959732 AAAACCGCTGGAATA GGCGG CTT CCGCC TGTCCTTTTGGGATG TERM 1088 959743 - 959755 + g 71 -10.5 -3.10537 | opp_overlap 959732 959743, overlap 959738 AAAACCGCTGGAATA GGCGG CTT CCGCC TGTCCTTTTGGGATG gltJ1 960839 - 960111 - | GltJ1 TERM 1089 960854 - 960881 + r 100 -17.1 -4.73108 | TCTGTTACTCCATAT CCGGGAAGGGT TGTGCC ACCCTTCCCGG TTTTGGTTTTATCCC gltB1 961786 - 960914 - | GltB1 TERM 1090 961451 - 961438 - G 72 -8.1 -3.88182 | TTAACGAAAAATCAA CCGTG TCTT CACGG GGAACCGTATGGGTG TERM 1091 961486 - 961518 + g 74 -7.7 -4.19238 | overlap 961487 961492 961517 CGCCACAAACCATAT TCAGGTTTCCGTTGG CAA CCAGTGGAATTCTGG TTTTGGGATTCACAA TERM 1092 961492 - 961512 + g 70 -8.3 -3.68761 | overlap 961487 961486 AAACCATATTCAGGT TTCCGTTGG CAA CCAGTGGAA TTCTGGTTTTGGGAT TERM 1093 961860 - 961884 + r 75 -8.5 -3.83864 | overlap 961862 TGCCCTTTATGTCTT TTGACGGGGAC ATT GTCCCTGTCTG TTCTTGTGGGGTTTT TERM 1094 961862 - 961882 + r 100 -13.3 -3.49226 | overlap 961860 CCCTTTATGTCTTTT GACGGGGAC ATT GTCCCTGTC TGTTCTTGTGGGGTT HRM2_08460 962944 - 962372 - | transcriptional regulator (Cro/CI family protein) HRM2_08470 964272 - 962962 - | hypothetical protein TERM 1095 964063 - 964100 + g 95 -6.3 -5.4387 | gap 1, overlap 964056 AAGATCGCCCCGGGC CCAGAGCCGGGTATCATC CGG GATGATAAC-GGCAATGG TTTTTTGGTTTATAT glcF1 965600 - 964269 - | GlcF1 glcD1 966970 - 965597 - | GlcD1 TERM 1096 966314 - 966338 + g 74 -10 -3.60627 | AACCATGAGGGTTTT GGTGGTTTCC GGCAG GGGGACCACC TTTAAAATAGCCTGG TERM 1097 966785 - 966799 + g 79 -7.8 -4.49756 | GGTGACGGGTATGTT GTGGCT GGA GGCCAC TTTTAATATTTGGGA TERM 1098 967017 - 966988 - R 81 -10.7 -3.34344 | gap 1 GTACTCCTTAACGAA GGATCCACCCGGGC AGG GCCAGGG-AGATCC ATGGAATGTAGGTGA dctM2 968257 - 966980 - | DctM2 TERM 1099 967783 - 967738 - G 83 -13.5 -3.29144 | gap 1 GCAGTCCGGGGACAA TGCCT-GCCATGAACATTTCCG CCA CAGACACGTTCATGACCAGGCA GTAGAGGATCATGGG dctQ2 968733 - 968254 - | DctQ2 TERM 1100 968757 - 968794 + r 73 -8.3 -3.64049 | overlap 968758 GTTCTCCTGAATGCT AACCCCCTGGCCGGGAA AGAT TTTTCGGCAAGGGGGAA TTTAAAGCTTATTGC TERM 1101 968758 - 968793 + r 83 -11.8 -2.77947 | overlap 968757 TTCTCCTGAATGCTA ACCCCCTGGCCGGGAA AGAT TTTTCGGCAAGGGGGA ATTTAAAGCTTATTG dctP2 969837 - 968803 - | DctP2 TERM 1102 970003 - 969989 - R 100 -8.6 -4.88293 | opp_overlap 969989 969988 AAGTTTAAAAATAAA TTTCCC AGG GGGAAA CTTTTCAGGGTGCTG HRM2_08530 970853 - 970128 - | spermidine synthase SpeE-like protein (Putrescine aminopropyltransferase) (SPDSY) TERM 1103 970794 - 970782 - G 71 -10.5 -3.15544 | CCCGAGTTGCAGCAA GCGGC GTC GCCGC AGCATCAACTCTCCG TERM 1104 971018 - 971006 - H 82 -10.5 -3.70553 | overlap 971007 GAATTTAATATATAA CCGGC ATG GCCGG AGCATGATATCTGCT TERM 1105 971381 - 971391 + G 70 -8.2 -3.80573 | CTGTCGGATCGGTTC GGCC GTC GGCC TTTGCTGCTGGTGGG TERM 1106 971490 - 971516 + G 77 -10 -3.65351 | CCCGGGTGATCCAGG GCGCCGGGGCAG CTT CTGCATCGGCCC TTTCAATGGCCATCA TERM 1107 971929 - 971953 + G 79 -5.5 -4.9725 | overlap 971930 TTTCTTTGCCCTTAA CGCGGCGTCCA TCA TGGCCGGCGCC TTTTTGTGTACCCGT TERM 1108 971930 - 971952 + G 70 -9 -3.57627 | overlap 971929 TTCTTTGCCCTTAAC GCGGCGTCCA TCA TGGCCGGCGC CTTTTTGTGTACCCG TERM 1109 972070 - 972092 + G 71 -7 -4.22369 | gap 1 TTTCCCCGGTCCCTG GGGCC-TGG CCTTGC CCATGGCCC TTCTTTCCTTTTCCT HRM2_08540 971177 - 972367 + | transporter Bcr/CflA subfamily HRM2_08550 973264 - 972470 - | hypothetical protein TERM 1110 972499 - 972526 + g 76 -4.8 -5.03314 | opp_overlap 972499 ACCTGAACAGAAAAT GGGTTCCCATCA GCCT TGCTGCGAATCC TTTTTTCCCGGTGCA TERM 1111 973055 - 973090 + g 74 -6.8 -4.3534 | gap 1, overlap 973058 CCAATGGCTCAGGCA GATGGCCCGGATGGATC CCG GATCCAGCCCAGCC-TC TTTTAATGATTCAAC TERM 1112 973058 - 973088 + g 77 -9.6 -3.77927 | overlap 973055 ATGGCTCAGGCAGAT GGCCCGGATGGATC CCG GATCCAGCCCAGCC TCTTTTAATGATTCA HRM2_08560 973828 - 973295 - | hypothetical protein TERM 1113 973355 - 973369 + g 74 -4.2 -4.81249 | overlap 973357 ATTGCGGCCAAGTTT GATCAG GAG CTGACC TTTTTGAATTTCAGA TERM 1114 973942 - 973928 - H 71 -4.2 -4.86731 | opp_overlap 973928, overlap 973930 TTTTTTTAAACAAAA TGGGCA ATG TGTCCA TTGTCTGAAATCCGG HRM2_08570 974187 - 975059 + | oxidoreductase, aldo/keto reductase family protein HRM2_08580 976675 - 975098 - | sensory histidine kinase/response regulator TERM 1115 975655 - 975673 + g 80 -3 -5.23644 | overlap 975657 CCAGCATGATACCGT TCTCCGCG ATT CGCAGATA TTTTTGTGTTTCGTT TERM 1116 976195 - 976217 + g 100 -4.1 -6.20267 | opp_overlap 976182 AATCAAAGATGTCCT TGAATCTGG CAAAC CCGGTTTCA TTTTTTTCTTTTTGG TERM 1117 976694 - 976709 + H 84 -2.6 -5.60993 | AGAAGGAGAAGACAA TAGGTA CAAA TATCTA TTTTTTTATGAAAAG HRM2_08590 976846 - 978117 + | DNA repair photolyase SplB-like protein TERM 1118 978206 - 978168 - f 70 -5.4 -4.55295 | opp_overlap 978195, overlap 978169 GCTGCCATAAACAAA CTTTGACAATAACCCCTA TAG CAGGTATTTTTGTCAAAA AATTGAATGGGATTG TERM 1119 978390 - 978373 - g 71 -5.5 -4.44245 | overlap 978374 ATATTACCGATAAAA CTGGCTG TCGC CATCCAG TTCCCCCTTACTTTT TERM 1120 978682 - 978711 + G 71 -11.5 -2.79183 | gap 1, overlap 978684 978686 TGGTTTATGGGTGCC TAT-ACGGCTGGCG GTC CGCCCGCCGTCATA TATGCTGCGGCTAAG TERM 1121 978686 - 978706 + G 78 -13.9 -2.71268 | overlap 978684 978682 TTATGGGTGCCTATA CGGCTGGCG GTC CGCCCGCCG TCATATATGCTGCGG HRM2_08600 978265 - 978984 + | hypothetical protein fbp1 980974 - 979019 - | Fbp1 TERM 1122 979628 - 979614 - G 83 -3.4 -5.40072 | overlap 979615 TCTGTGGTAAAAAAA CCCTGC CGG GCCAGG CGATGCATTTTTTCC glgC2 982258 - 980993 - | GlgC2 TERM 1123 981642 - 981625 - G 73 -2.7 -5.00616 | GGTCTGTGGAAAAAA CATAGAT GCCC ATCGATG CCATAAAGGGTTTTT gap1 983303 - 982284 - | Gap1 TERM 1124 983420 - 983432 + r 73 -2.7 -5.23644 | CTTTCCAGCGCTACC CAGAA CAT TTTTG TTTTTATCTTTAATT fba2 984379 - 983399 - | Fba2 pfkB1 985331 - 984405 - | PfkB1 HRM2_08660 987072 - 985336 - | Zn-dependent dehydrogenase TERM 1125 986905 - 986891 - G 70 -4.2 -4.64766 | TTCACATCGGAAAAA CAGAGT CCT ACGCTG TCAACCCGAACGAGC TERM 1126 986958 - 986968 + g 100 -8.2 -5.28755 | opp_overlap 986957 GGATGGGCAATAATT CGGG TTT CCCG TTTTTTCCTATATTT mtp 991063 - 987107 - | Mtp TERM 1127 987762 - 987773 + g 76 -5.8 -4.71426 | CGAATCCCTCTCATC CCCA AAAA TGGG TTTTCTTCATGGGAA TERM 1128 992121 - 992145 + G 71 -6.4 -4.38141 | gap 1 TCCTGTCTGAACCTT CTCCGG-GACG AAAA TGTCGCCGGGG TTATTTTATCTCCCA HRM2_08680 991791 - 992786 + | HTH-type transcriptional repressor (LacI family protein) pgm 992833 - 994488 + | Pgm TERM 1129 994768 - 994792 + G 70 -11.4 -2.62616 | gap 1 CTTTACTATGGCGCA CGCCG-GGGTG GCGT CGCCCTCGGCG TCATCTCGGGCATCG dcuA 994714 - 996045 + | DcuA TERM 1130 996243 - 996200 - f 71 -4.6 -4.62471 | opp_overlap 996200 TGCAAGGCGCAAAAA TTTCTGAAACCGGAGCGTAC TACT GTACGTGGGGATTTCAGAAA TTTGCAGCAACGCCG TERM 1131 996367 - 996343 - g 91 -4.9 -5.66684 | CAAGTGAGAAAAAAA GGAACTGCACA AGG TGTGGGGCTCC GGTCCAACCCTATGA HRM2_08710 996324 - 996926 + | hypothetical protein TERM 1132 997188 - 997173 - g 73 -10.4 -3.29471 | CCTGGATTACATGAA GGCCAC CCCC GTGGCC CTGCAACGCCTGGAC TERM 1133 997928 - 997945 + G 100 -8.3 -5.60993 | AACCATTCATTTCTC CCGGGGG CAAA CCCACGG TTTTTTTATCCAAAA TERM 1134 998075 - 998089 + G 76 -5.7 -4.62471 | overlap 998083 GAAGCTGTACCCATA TTGCC GGCCA GGCAA TTTTGTCTGTGGGTT TERM 1135 998655 - 998669 + G 70 -4.2 -4.63218 | TATTGACTATTTTGG TCGGCT CAT GGCTGA TTTTATTGAGGAGCG nifH1 996994 - 999234 + | NifH1 TERM 1136 999640 - 999661 + G 70 -8.7 -3.53224 | gap 1, opp_overlap 999633 TGAAAATACAGGGTT CTCCCA-GCC CCT GGCATGGGGG TTTCAACAGGCGGTC nifD1 999224 - 1000519 + | NifD1 TERM 1137 1000549 - 1000561 + F 95 -2.6 -6.28631 | overlap 1000548 ATAGTTGATTTTATA GGCC TGGCC GGTC TTTTTTTTTGCTTTG TERM 1138 1001142 - 1001132 - g 87 -4.6 -5.40474 | opp_overlap 1001133, overlap 1001133 ATGGCGTCAAAAAAA GCCC TGG AGGC ATCCATGGTGTTTGA msrAB 1000661 - 1001800 + | MsrAB TERM 1139 1001955 - 1001941 - T 70 -7.1 -3.83998 | TGAGCGCAGATGAAA CCCCT GTCAA AGGGG GACTGGAAAATTCAG acsL1 1003545 - 1001983 - | AcsL1 HRM2_08760 1003992 - 1005140 + | two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) HRM2_08770 1005142 - 1006014 + | GGDEF domain protein (selenocysteine protein) TERM 1140 1006531 - 1006544 + G 74 -2.4 -5.08601 | opp_overlap 1006531 GTTTGCCCAGGCAAA TCTC ATTGAC GAGA TTTTTGTTACCGTGG folA 1006184 - 1006687 + | FolA HRM2_08790 1007059 - 1007886 + | cytochrome-c3 hydrogenase, gamma subunit (electron transfer subunit) TERM 1141 1007964 - 1007951 - g 71 -6.7 -4.14392 | TGCCAAGGGTGAAAA TGCCT GAGC AGGCA CCCGAAGTCCGGCGC gltA2 1007908 - 1009317 + | GltA2 TERM 1142 1009304 - 1009324 + T 84 -5.3 -5.35224 | TACATGATTACCTGA CCCGGGGCT GGT AGTTCCAGG TTTTGTTTTTATGGG HRM2_08810 1009612 - 1009424 - | hypothetical protein HRM2_08820 1010060 - 1009605 - | hypothetical protein TERM 1143 1009766 - 1009777 + g 76 -5.8 -4.62336 | CAGGGGAAAGGGCGA TGGC TTCA GCCA TTTTTGGCGTGAGCT TERM 1144 1010173 - 1010162 - H 71 -4.4 -4.82901 | TGCCGGTTAGAAAAA GCTT GATT AAGC TGGCAAGTCATGTAT TERM 1145 1010273 - 1010283 + H 77 -4.6 -5.07107 | overlap 1010276 TATTGTAGGGGGGGG GCCT GCC GGGC TTTTTTCGGCATTTC TERM 1146 1010747 - 1010730 - g 91 -2.7 -5.83822 | TATATTGAAAAAAAA GGTCTTA CCAT CAAAACC AGTGAGACCGTCGTT HRM2_08830 1010331 - 1011629 + | FAD-dependent dehydrogenase cat4 1011650 - 1013545 + | Cat4 TERM 1147 1013594 - 1013561 - T 100 -11 -4.84017 | opp_overlap 1013561 AACCGGCTATAAAAA GGGGCCGTTTCATC TATCCT GGTGAAACGGTCCC TTTGTTTCTTAATGT TERM 1148 1013561 - 1013594 + T 100 -15.4 -4.71791 | opp_overlap 1013561 AACCGGCTATAAAAA GGGGCCGTTTCATC TATCCT GGTGAAACGGTCCC TTTGTTTCTTAATGT acsM1 1015448 - 1013685 - | AcsM1 TERM 1149 1014211 - 1014200 - G 79 -7.2 -4.58395 | overlap 1014201 1014202 TGTATTCGGTAAAAA GGCC GATG GGCC GCCAGCGGTTAAGGC TERM 1150 1015126 - 1015151 + g 79 -7.5 -4.56597 | opp_overlap 1015125 GTTTCTGGAACAATG GGGGTCATCAT GTAC ATGTTGTCCCC TTTTTCCACACCCGA TERM 1151 1015696 - 1015669 - R 93 -12.7 -3.02745 | overlap 1015666 GGGATTCAGAAAGGA CTCTCCCCTGC ACGATG GCAGGGGAGGG TGGGGGCTATGGGAG acd2 1017528 - 1015717 - | Acd2 TERM 1152 1016221 - 1016254 + g 79 -12.5 -3.14564 | gap 1, opp_overlap 1016210, overlap 1016224 AATACTGGTGATCTT GCAGT-CCCTCAGGAG CTG CTCCTGGGGGTACTCC TTGATGAACCCGTAA TERM 1153 1016224 - 1016251 + g 77 -12.8 -2.77899 | gap 1, opp_overlap 1016210, overlap 1016221 ACTGGTGATCTTGCA GT-CCCTCAGGAG CTG CTCCTGGGGGTAC TCCTTGATGAACCCG HRM2_08870 1018181 - 1017561 - | transcriptional regulator (TetR-family protein) TERM 1154 1018594 - 1018616 + G 77 -9.8 -3.73072 | AAAAAACTCAGGGGT TCAGGCCTGT TGT GCCGGCCTGA TTTAATAGACGCCTT dhs1 1018273 - 1019235 + | Dhs1 HRM2_08890 1019417 - 1019250 - | hypothetical protein TERM 1155 1019804 - 1019791 - gH 71 -6.7 -4.18018 | opp_overlap 1019790 1019791 CTGGGCCATTGAAAA CCTTG CGCC CAAGG ATTTGCTCCAGGGTG TERM 1156 1020010 - 1020000 - gH 71 -8.2 -3.53012 | TTGTGCTTCGCGAAA CCCG GTT CGGG GATGATTTGATTGCA TERM 1157 1020057 - 1020044 - gH 95 -2.3 -6.11243 | overlap 1020045 ACGGAAGAAAAAAAA CGCAG GGAA CTGCT GGCCGAGGCGGAAAA HRM2_08900 1019399 - 1020379 + | putative serine protease transmembrane protein HRM2_08910 1020397 - 1023699 + | hypothetical protein TERM 1158 1023800 - 1023812 + F 100 -10.5 -4.60797 | overlap 1023775 GAGCCATACCTCGTT CCGGC CGT GCCGG TTTTATATGTAACAC HRM2_08920 1025045 - 1026304 + | hypothetical protein TERM 1159 1026392 - 1026358 - T 100 -18 -4.09243 | opp_overlap 1026363, overlap 1026361 1026363 GACAGTTTGTTAAAA CAAGACAGGGTCTGCC GTT GGCAGACCCTGTTTTA TTATTCGTTCTCCAC TERM 1160 1026389 - 1026361 - T 100 -17.5 -4.17316 | opp_overlap 1026363, overlap 1026358 1026363 AGTTTGTTAAAACAA GACAGGGTCTGCC GTT GGCAGACCCTGTT TTATTATTCGTTCTC TERM 1161 1026363 - 1026387 + T 100 -20.1 -4.95167 | opp_overlap 1026361 1026358 1026363 TTTGTTAAAACAAGA CAGGGTCTGCC GTT GGCAGACCCTG TTTTATTATTCGTTC TERM 1162 1026387 - 1026363 - T 100 -20.1 -3.68435 | opp_overlap 1026363, overlap 1026361 1026358 TTTGTTAAAACAAGA CAGGGTCTGCC GTT GGCAGACCCTG TTTTATTATTCGTTC HRM2_08930 1027184 - 1026393 - | hydrolase (alpha/beta superfamily protein) HRM2_08940 1029350 - 1027194 - | TonB-dependent outer-membrane uptake protein TERM 1163 1027517 - 1027530 + g 70 -4.5 -4.62783 | TAAAGGCCAGGGGCT CATCC GTTC GGGTG TTTTTGCCATAGATA HRM2_08950 1031061 - 1029355 - | hypothetical protein TERM 1164 1031132 - 1031146 + r 74 -5 -4.8384 | GATTAATTGTATGGT CAGTTT TGA AAGCTG TTTTTGCATTGTTTA HRM2_08960 1032721 - 1031300 - | multidrug resistance protein (efflux pump/antiporter) TERM 1165 1031618 - 1031608 - G 78 -2.4 -5.27335 | TGGGTGAAACAAAAA GGGC TGT GCCT GTTCCGGCCAGGGCC TERM 1166 1032103 - 1032120 + g 74 -6.9 -4.43501 | AGACCAGGCTGACGG CCTGCAG GAGA CTGCCGG TTTTGTCCATGGGTT TERM 1167 1032463 - 1032427 - G 91 -11.5 -4.32436 | AGATGATGAGGAAAA GCGGAGTCTGGGCCATG GCG CACAGGCCAGAGCCCGC GGTAAATATGAGGAA uvrA1 1035661 - 1032752 - | UvrA1 TERM 1168 1034713 - 1034726 + g 70 -8.1 -3.65522 | GGATTGTGAGACTGG GGTCG GCAA CGACC TTGTTCACATCCATG TERM 1169 1034921 - 1034944 + g 71 -6 -4.42386 | gap 1, overlap 1034922 GCCAAGTTTAAGGGC TGTCTCCACCG AGT CGGTG-AGGCG TTTTGTGAATGCCGG TERM 1170 1035694 - 1035709 + H 79 -3.2 -5.25656 | opp_overlap 1035694 1035693, overlap 1035693 TCTAATATGTTAAAC CCCTTT GCAG GGAGGG TTTTTTCATGGTTTT HRM2_08980 1035865 - 1036818 + | hypothetical protein TERM 1171 1037310 - 1037283 - g 76 -6.9 -4.56597 | overlap 1037301 TGGCCCTGGGAAAAA TCCACGGACCC GAAGAA GTGGCCGTGGA CAGCCTGGGTCGGGT TERM 1172 1037415 - 1037397 - g 82 -11.7 -3.5394 | opp_overlap 1037391 1037407 AAACTTTTGCCGAAA CCCAGGG CCGTC CCCTGGG GATTCAGTTTGACAC HRM2_08990 1037105 - 1038166 + | hypothetical protein gph1 1038912 - 1038247 - | Gph1 TERM 1173 1039042 - 1039024 - H 71 -3 -4.94992 | opp_overlap 1039014, overlap 1039014 1039026 CCAAACCCAGAAAAA CGGGGTGA TTA TCATCCAG GGAACCTCAAAATTT HRM2_09010 1039199 - 1039576 + | hypothetical protein TERM 1174 1040071 - 1040083 + G 73 -9.1 -3.66178 | GGGTTGGGACAGTTC GGCCT CCC AGGCC TTTGACATTGCCCGC TERM 1175 1040261 - 1040241 - g 70 -11.2 -2.64107 | opp_overlap 1040238, overlap 1040231 1040244 GAAACGGGGATATCA CAACCCCT GAGCA AGGGGTTG CAATGATTCAGGAGA dhs2 1039628 - 1040620 + | Dhs2 TERM 1176 1040889 - 1040846 - g 72 -9.5 -3.35679 | gap 1, overlap 1040821 GGCCCTCATGGACAA GGGCCAG-GTCGGCACGGCA CGATC TGCCGTGGCAAGGCAGGCCC ACATTGTCGGGTGCG HRM2_09030 1040640 - 1041113 + | hypothetical protein bioF 1041129 - 1042349 + | BioF HRM2_09050 1042403 - 1043236 + | hypothetical protein TERM 1177 1043819 - 1043833 + G 71 -7 -4.23674 | GGATCGTTTTTCGTC GGCCTG GCG CTGGCC TTTATGTTGGTGAAC TERM 1178 1043952 - 1043929 - g 76 -3 -5.06451 | TACCAGCGGAAAAAA CGCGGCAGCA TCAG TGTTGTCACG GCAAGGGGGTGTCCC TERM 1179 1044470 - 1044481 + G 78 -2.2 -5.24129 | CCAGGCGGACCCTGG TGGG ACTC TCCA TTTTTTATCCGGCAC HRM2_09060 1043233 - 1044900 + | putative methyltransferase (radical SAM domain) TERM 1180 1045118 - 1045106 - f 80 -10.5 -3.48276 | GGGTGTTTCATATAA CCGGC ATG GCCGG AGCAAGGTATCGCTT rho1 1045242 - 1046309 + | Rho1 HRM2_09080 1046302 - 1047075 + | putative aminohydrolase HRM2_09090 1047552 - 1048601 + | putative two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) TERM 1181 1048838 - 1048799 - g 80 -2.2 -5.44721 | gap 1 ATTACCCTAAAAAAA TTAAAGAGATGATCGTTCC ACT GGC-CGAATATCTCTCTAA GGAAATTGGTGCAAC HRM2_09100 1048678 - 1049499 + | putative methyl-accepting chemotaxis protein HRM2_09110 1049725 - 1049450 - | hypothetical protein TERM 1182 1050124 - 1050104 - g 100 -7.5 -5.86061 | CGGGATGAAAAAAAA TCCCTCACC ATC GGGGAAGGA CAGACCCGAACCCAT TERM 1183 1050575 - 1050603 + G 70 -9.5 -3.21924 | overlap 1050573 1050576 1050578 GCCATGGCCGGAGTT TCAGCCCCCATGG GAC TCATGGGAGCTGC TGTTCTCCAGAATGC TERM 1184 1050576 - 1050602 + G 75 -13 -2.5294 | overlap 1050575 1050573 1050578 CCATGGCCGGAGTTT CAGCCCCCATGG GAC TCATGGGAGCTG CTGTTCTCCAGAATG mttB4 1049861 - 1051291 + | MttB4 TERM 1185 1051420 - 1051438 + G 78 -6 -4.83615 | opp_overlap 1051411 ACCAGATTCAACCCT GAAAACTG AAC CAGTTCTC TTTTTCTCAGCACTG TERM 1186 1051671 - 1051685 + G 74 -2.1 -5.15634 | gap 1 AATTTTCAACGATCA GC-TGG ATTG CCATGC TTTTTTGCTGCGGTA TERM 1187 1052376 - 1052390 + G 72 -3.5 -4.82901 | overlap 1052362 GGTGGCTGGGTGCAG CTCCT TTTGT AGGGG TTTTTCTGGCCAAAA TERM 1188 1052559 - 1052531 - g 77 -10.3 -3.61398 | overlap 1052532 CTGTTTGGGGAACAA TCCATGACTACCA TGA TGGCAGCCATGGG GCCAGCCAAAACCAT TERM 1189 1052558 - 1052532 - g 79 -13.8 -2.76696 | overlap 1052531 TGTTTGGGGAACAAT CCATGACTACCA TGA TGGCAGCCATGG GGCCAGCCAAAACCA opuD4 1051391 - 1053040 + | OpuD4 TERM 1190 1053059 - 1053095 + T 70 -7.8 -3.72678 | opp_overlap 1053062, overlap 1053061 1053062 GCCAGATCAAAAACA AAAGCCCCGGCAGTGG TTTCT CCAAAGCCGGGGCCTG TTTAAATAGTGTTTG TERM 1191 1053061 - 1053093 + T 80 -10.4 -3.43511 | opp_overlap 1053062, overlap 1053059 1053062 CAGATCAAAAACAAA AGCCCCGGCAGTGG TTTCT CCAAAGCCGGGGCC TGTTTAAATAGTGTT TERM 1192 1053092 - 1053062 - T 100 -13.9 -5.32396 | opp_overlap 1053062 1053061 1053059 AGATCAAAAACAAAA GCCCCGGCAGTGG TTTCT CCAAAGCCGGGGC CTGTTTAAATAGTGT TERM 1193 1053062 - 1053092 + T 95 -13.9 -2.65384 | opp_overlap 1053062, overlap 1053061 1053059 AGATCAAAAACAAAA GCCCCGGCAGTGG TTTCT CCAAAGCCGGGGC CTGTTTAAATAGTGT HRM2_09140 1055089 - 1053302 - | methyl-accepting chemotaxis protein TERM 1194 1053872 - 1053882 + g 73 -3.2 -5.02074 | ATCCAGACTTGCCAT CTTC ATG GAGG TTTTTTCAGCCCTGG TERM 1195 1055589 - 1055603 + G 70 -11.4 -2.66291 | CAGAGATCCTTGACC GGCGGT TTG ACCGCC TGGTCTCCATGTATC engD 1055459 - 1056529 + | EngD TERM 1196 1057231 - 1057247 + G 71 -10.9 -3.07962 | overlap 1057233 AGGCCGTTCCTTTGA TATCGGG GGA CCCGATA TATTGACCTATGGCG HRM2_09160 1056554 - 1058044 + | NAD-dependent epimerase/dehydratase family protein HRM2_09170 1058176 - 1058505 + | hypothetical protein HRM2_09180 1060787 - 1058613 - | putative acetyl-CoA hydrolase (acetyl-CoA hydrolase/transferase family protein) TERM 1197 1059885 - 1059869 - G 91 -10.9 -4.56597 | opp_overlap 1059868 1059869 1059871 GCCCGGTTTTAAAAA CATCGGT TCC ACCGATG GTTTGAATCAAAGGA HRM2_09190 1061318 - 1060911 - | hypothetical protein moaB 1061919 - 1061410 - | MoaB TERM 1198 1061643 - 1061631 - G 73 -6.2 -4.56597 | GTTTCTTTGTAAAAA GCGG GGTTA CCGC CTCAATGGTGACATC pyrR 1062460 - 1061921 - | PyrR TERM 1199 1063072 - 1063050 - g 71 -5 -4.46112 | overlap 1063051 GCTGATCGAAACAAA CCTTAAAAAT CAT ATCTTTAAGA TCAATCGATTTTTTC mobA 1062613 - 1063236 + | MobA moaE 1063223 - 1063582 + | MoaE TERM 1200 1063595 - 1063583 - f 89 -10.5 -3.9122 | overlap 1063584 CAGTTCTTCAAATAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 1201 1063621 - 1063584 - f 73 -9.7 -2.94411 | overlap 1063583 AGTTCTTCAAATAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATTTTGAAACACCT TERM 1202 1063683 - 1063671 - f 80 -10.5 -3.48593 | GAGTGTTTCATATAA CCGGC ACG GCCGG AGCGTGGTATGGCTC TERM 1203 1063772 - 1063760 - f 86 -10.5 -3.85817 | AGTGTTTCTTATAAA CCGGC ACG GCCGG AGCGAAGTATCGGCT moaC 1063864 - 1064355 + | MoaC TERM 1204 1065441 - 1065410 - gf 86 -6.6 -5.00616 | gap 1, overlap 1065418 GTTTCTGCCAAAAAA TTATCAAACCTCGGC ATT GCCGAGGATAGA-AA TATCCCCGAGGTCCA TERM 1205 1065434 - 1065418 - gf 100 -13.7 -3.98747 | overlap 1065410 CAAAAAATTATCAAA CCTCGGC ATT GCCGAGG ATAGAAATATCCCCG HRM2_09250 1064318 - 1065505 + | hypothetical protein HRM2_09260 1065595 - 1066767 + | membrane-bound lytic murein transglycosylase A [precursor] (Murein hydrolase A) (Mlt38) HRM2_09270 1066845 - 1067213 + | hypothetical protein HRM2_09280 1067219 - 1067722 + | hypothetical protein TERM 1206 1067735 - 1067723 - f 77 -10.5 -3.14211 | opp_overlap 1067726 1067727 ATCCTTCTTGATTAA CCGGC ATG GCCGG CCCATGGTTCTATTC TERM 1207 1068203 - 1068224 + G 73 -8.8 -3.80855 | CTTTACCTGCAGGCC GGAATTCC AACGCC GGAATTCC TTAGTTTTTCAAGGA ddlA 1067876 - 1068805 + | DdlA TERM 1208 1068862 - 1068850 - f 78 -10.5 -3.36175 | AACCTTGAGTCATAA CCGGC CCC GCCGG AATGAGGCAGCCAAT TERM 1209 1070242 - 1070264 + G 70 -8.4 -3.68351 | GCCCAGGGTGGGTGT GATCATGGGC AGC GCCTCTGATC TTTCCGTAATGGAGG TERM 1210 1070363 - 1070346 - g 75 -10.5 -3.48276 | opp_overlap 1070345 CTTCTGCCCATAGAA CCCCGGC TAGA GCCGAGG CCTTTGCCGCAACGG purD 1068950 - 1070713 + | PurD TERM 1211 1070735 - 1070755 + G 84 -11.2 -3.83026 | CGTTCTGGATGTTGA TCCCCTTG AACCC CAAGGGGA TTTCATCTCAAGGGC HRM2_09310 1070697 - 1071371 + | hypothetical protein HRM2_09320 1071374 - 1071790 + | hypothetical protein TERM 1212 1071944 - 1071970 + T 100 -15.2 -4.66163 | opp_overlap 1071944 ACCATTGATAATAAA GGCTTTCAGCGG TTT TCGCTGGAAGCC TTTTTAGCTGGGAGT TERM 1213 1071970 - 1071944 - T 100 -12.3 -4.33819 | opp_overlap 1071944 ACCATTGATAATAAA GGCTTTCAGCG GTTTT CGCTGGAAGCC TTTTTAGCTGGGAGT HRM2_09340 1072133 - 1072023 - | hypothetical protein HRM2_09350 1072503 - 1072240 - | hypothetical protein TERM 1214 1073101 - 1073127 + r 100 -9.4 -5.27477 | opp_overlap 1073101 ACCATTGATAATAAA GGCTTTCAGCGG TTT TCGTTGGAGGCC TTTTTTGCTTCAAAT TERM 1215 1073152 - 1073169 + r 75 -3.3 -5.1523 | overlap 1073146 TCAAATCAGGCAAAG GCGCTTC TGAG GGAGGGC TTTTTCTATTCTCGC HRM2_09360 1073590 - 1073216 - | putative transcriptional regulator TERM 1216 1073280 - 1073296 + g 80 -4.3 -5.19916 | ATTATTTTATGCATT CCATGCC CTG GGTTTGG TTTTTTCAATATTTT HRM2_09370 1073904 - 1073587 - | putative transcriptional regulator TERM 1217 1073985 - 1074018 + H 82 -10.3 -3.66286 | opp_overlap 1073972 1073970 1074009, overlap 1073981 CAGGGTACATGGTAC CGGGGTCGGGACTAT CATG ATAATCCAGATCCCG TTGTTCCGGTAATGT TERM 1218 1074166 - 1074144 - g 82 -12 -3.59262 | opp_overlap 1074144 CTTGAGACGTTGAAA CCTTCGGACC TGA GCTCCGAAGG TTTGGTAAAAAGCTC TERM 1219 1074144 - 1074166 + G 85 -12 -3.72893 | opp_overlap 1074144 CTTGAGACGTTGAAA CCTTCGGACC TGA GCTCCGAAGG TTTGGTAAAAAGCTC HRM2_09380 1074090 - 1074404 + | hypothetical protein HRM2_09390 1076115 - 1074439 - | transposase (IS4 family protein) TERM 1220 1076113 - 1076134 + g 76 -3.1 -5.0925 | gap 1, overlap 1076115 1076117 TTCTGGTAATTCTTT C-ATGCATTG CCT CAATGTATTG TTTTTCATTTTGGCA TERM 1221 1076115 - 1076131 + g 76 -5.9 -4.62313 | overlap 1076113 1076117 CTGGTAATTCTTTCA TGCATTG CCT CAATGTA TTGTTTTTCATTTTG TERM 1222 1076706 - 1076732 + r 100 -15.2 -4.88228 | opp_overlap 1076706 ACCATTGATAATAAA GGCTTTCAGCGG TTT TCGCTGGAAGCC TTTTTAGTCTTAAAT TERM 1223 1076732 - 1076706 - R 100 -12.3 -4.33819 | opp_overlap 1076706 ACCATTGATAATAAA GGCTTTCAGCG GTTTT CGCTGGAAGCC TTTTTAGTCTTAAAT HRM2_09400 1077058 - 1076747 - | plasmid maintenance system antidote protein (HTH-type transcriptional regulator family protein) HRM2_09410 1077366 - 1077067 - | putative plasmid maintenance system killer protein TERM 1224 1077713 - 1077701 - H 78 -9.1 -3.78998 | CGAAACCAAAAGTAA GGCTC TGA GAGCC GCGTCAGTTAAGGGT TERM 1225 1077858 - 1077832 - H 100 -12.4 -4.33819 | opp_overlap 1077832 ACCATTGATAATAAA GGCTTTCAGC GTTTCTG GCTGAAAGCC TTTTGTTGTTCTTGA TERM 1226 1077832 - 1077858 + H 100 -12.4 -5.00467 | opp_overlap 1077832 ACCATTGATAATAAA GGCTTTCAGC GTTTCTG GCTGAAAGCC TTTTGTTGTTCTTGA TERM 1227 1077983 - 1077953 - H 76 -7.7 -4.22591 | opp_overlap 1077949, overlap 1077981 AAGAATGGCAACAAA TCGTTTTGTGTTG ACGCA CGACACAAAACAA TGACATATTATGTCA TERM 1228 1077998 - 1077984 - H 75 -7.2 -4.39748 | overlap 1077981 CACGACACAAAACAA TGACAT ATT ATGTCA CGCTATTATGTCACG HRM2_09420 1078068 - 1078778 + | hypothetical protein HRM2_09430 1080173 - 1078818 - | predicted transposase TERM 1229 1079234 - 1079246 + g 84 -4.8 -5.24129 | CTGTTGATAAAAGGG CGAG CCATC CTCG TTTTTTATCACAGGG HRM2_09440 1080459 - 1081013 + | hypothetical protein TERM 1230 1081114 - 1081134 + T 83 -11.9 -2.60941 | opp_overlap 1081098 1081113 1081112 1081109, overlap 1081113 1081116 CAGGGTGAAATAACC CAGAGGGCA TCA TGTCCTCTG ATTATAGGATGTCCT TERM 1231 1081229 - 1081217 - T 78 -9.1 -3.78998 | TGAAACCAAAAGTAA GGCTC TGA GAGCC GCGTCAGTTAAGGGT TERM 1232 1081348 - 1081374 + T 100 -11.6 -4.86621 | opp_overlap 1081348 ACCATTGATAATAAA GGCTTTTAGCGG TTT TCGCTGGAAGCC TTTTTAGTTGGGAGT TERM 1233 1081374 - 1081348 - T 72 -6.5 -4.33819 | opp_overlap 1081348 ACCATTGATAATAAA GGCTTTTAGCG GTTTT CGCTGGAAGCC TTTTTAGTTGGGAGT HRM2_09450 1082601 - 1081573 - | predicted death-on-curing family protein TERM 1234 1081840 - 1081820 - G 73 -6.2 -4.46212 | overlap 1081824 TTCTTTACGACAAAA TAAAGCAG ATGGG CCGCTTTA CTCTCAATGGTGGGA TERM 1235 1082388 - 1082414 + g 91 -15.3 -3.38088 | overlap 1082367 TGGCACCATGCTGAG TGGTATGTCGG AAATC CCGACATACCA TTGGTTCCATCAGTT HRM2_09460 1083421 - 1083158 - | predicted death-on-curing family protein TERM 1236 1083350 - 1083330 - G 70 -2 -5.05301 | gap 1, opp_overlap 1083334, overlap 1083334 AAATAACCAGAAAAA TCA-ATTTC ATCT GAAATGTGA TCGTCAAAGGAAATA HRM2_09470 1084437 - 1084015 - | hypothetical protein TERM 1237 1085008 - 1084977 - R 100 -11.1 -5.27938 | gap 1, opp_overlap 1084974 1084979 1084981 AGTTGTAAACAAAAA TAGACCATT-CGCT AAAAA AGCGTAATGGTCTA TCCTGATTTAATTAT TERM 1238 1084979 - 1085006 + r 71 -9.3 -2.90456 | gap 1, opp_overlap 1084977, overlap 1084974 1084981 TTGTAAACAAAAATA GACCATT-CGCT AAAAA AGCGTAATGGTC TATCCTGATTTAATT HRM2_09480 1085880 - 1085134 - | putative transposase HRM2_09490 1087492 - 1085804 - | hypothetical protein TERM 1239 1085962 - 1085992 + gr 80 -2.4 -5.47914 | TCTGGTTATGCTGAA GGATTTGCTTTGCC ATG GGCATGGAAAGACC TTTTTTATAATTTTT TERM 1240 1086058 - 1086074 + gr 76 -5.1 -4.83169 | GCTCCAAAAAGGCGA TGATCTG ATC CAGCTCA TTTTTGTCCGGCAAT TERM 1241 1087336 - 1087350 + gr 86 -5.6 -5.28683 | opp_overlap 1087327 CAAGTAGGAGTGGCC CCGGAA TAA TGCCGG TTTTTTGATATTGAT TERM 1242 1087385 - 1087402 + gr 80 -2.6 -5.52023 | overlap 1087386 GTAATATTTTTTACT TGCTCG TTTGGC CGAGCC TTTTTTGTTCATGAT HRM2_09500 1088060 - 1087479 - | hypothetical protein TERM 1243 1087846 - 1087829 - G 74 -9.9 -3.61715 | opp_overlap 1087828 1087827 CATTGTTGGGAAGAA TGTCTCC AATT GGAGACA GATTGTTGATAACCT dnaG4 1088431 - 1088060 - | DnaG4 HRM2_09520 1089130 - 1088732 - | hypothetical protein HRM2_09530 1091512 - 1089653 - | putative sulfatase (transmembrane protein) HRM2_09540 1092743 - 1091712 - | putative 16S rRNA processing protein RimM (selenocysteine protein) TERM 1244 1092752 - 1092764 + r 80 -10.5 -3.48924 | GAGTCATAACTCGCT CCGGC CGT GCCGG TTATATAAACAGTCA napH 1093680 - 1092844 - | NapH TERM 1245 1093565 - 1093537 - G 74 -7.6 -4.16279 | opp_overlap 1093544 CAGAGGATCTGAAAA TGTTAAACATCC GATAT GGATGTTTAAAA AATTTCCCCAGATAA HRM2_09560 1093958 - 1094200 + | hypothetical protein nagD 1095037 - 1094180 - | NagD TERM 1246 1094665 - 1094687 + g 70 -4.8 -4.64144 | CATATTCCTCGGTTT CCCCAATGAT GAC ATAATCGGGG TTTTTAGAGGTTATT TERM 1247 1095219 - 1095189 - R 100 -10.5 -4.7373 | opp_overlap 1095189 TGACCCCAGCAAAAA GTCATACCGCCTG TATGG CAGAAGGTATGAC TTTTCAGGGCTGCTG TERM 1248 1095189 - 1095219 + r 83 -9 -4.10161 | opp_overlap 1095189 TGACCCCAGCAAAAA GTCATACCGCCTGT ATG GCAGAAGGTATGAC TTTTCAGGGCTGCTG aroH 1096584 - 1095238 - | AroH TERM 1249 1096572 - 1096583 + g 91 -4.4 -5.53436 | ATTTTGTCCATTCTT TGGT ATTC ACCA TTTTTTATATTCTCT TERM 1250 1096840 - 1096864 + r 100 -15.8 -4.0492 | opp_overlap 1096840 GCGGTCCTAATTAAA CGGCATGCCA TGCAC TGGCATGCCG TTTGTGTCAAAATTA TERM 1251 1096864 - 1096840 - R 100 -15.8 -3.90112 | opp_overlap 1096840 GCGGTCCTAATTAAA CGGCATGCCA TGCAC TGGCATGCCG TTTGTGTCAAAATTA lon2 1099277 - 1096881 - | Lon2 TERM 1252 1099707 - 1099693 - g 74 -8.6 -4.0492 | opp_overlap 1099692 CAACTCTCAGATAAA CTTGGA ATG TCCAAG CTTCAATTAAATCAA HRM2_09600 1099552 - 1100022 + | transcriptional regulator (MarR family protein) HRM2_09610 1101063 - 1100107 - | hypothetical protein TERM 1253 1100227 - 1100198 - G 71 -5 -4.58303 | gap 2, overlap 1100199 1100200 CCAAAGATCAGAAAA GCCCC-CAC-CCAT CCCA ATGGTGAGAGGGGC AGATCATAGGGGAGA TERM 1254 1101274 - 1101249 - R 80 -6.1 -4.77173 | GTCCTATAAAATAAA CAGTTGCCAGA CTAT CCCTGCAACTG CGCCCAATGGTACCA chrA1 1101581 - 1101237 - | ChrA1 chrA2 1102108 - 1101623 - | ChrA2 HRM2_09640 1102340 - 1102110 - | hypothetical protein ushA 1104229 - 1102412 - | UshA TERM 1255 1105216 - 1105226 + G 87 -4.6 -5.40004 | GCCAGATGGTCTTTT CGGT TGC GCCG TTTTTTGGTTTGCTG HRM2_09660 1104477 - 1105535 + | putative permease of the drug/metabolite transporter (DMT) superfamily nifH2 1106211 - 1107032 + | NifH2 glnB2 1107061 - 1107411 + | GlnB2 TERM 1256 1107472 - 1107445 - g 76 -6.4 -4.71426 | gap 1, overlap 1107449 TCCGCATGAACAAAA TCAA-CAAGACCA AAC TGGCCCTGATTGA CGCGGGAATATCCTC glnB3 1107408 - 1107788 + | GlnB3 nifD2 1107816 - 1109480 + | NifD2 nifK1 1109549 - 1110931 + | NifK1 nifE 1111027 - 1112403 + | NifE TERM 1257 1113111 - 1113099 - g 88 -10.5 -4.1899 | CCAGGTCATTCAAAA GGGGG GAA CCCCC ATCCGCCAGATCCAG nifK2 1112410 - 1113828 + | NifK2 TERM 1258 1114390 - 1114370 - g 100 -11.1 -5.00616 | CGGTTCGGCAAAAAA TCCCTGGCC CCC GGGCAGGGA GTGAAACTGCTTCTG nifB2 1113905 - 1115179 + | NifB2 TERM 1259 1115220 - 1115188 - f 79 -7.7 -4.36595 | overlap 1115189 1115191 TATGTAAACCTAAAA CCATGGGGACAGATT TGA AATCTGTCCCCCAAA AAGGAAAAAAAATGG TERM 1260 1115217 - 1115191 - f 100 -13.8 -3.16093 | overlap 1115189 1115188 GTAAACCTAAAACCA TGGGGACAGATT TGA AATCTGTCCCCC AAAAAGGAAAAAAAA TERM 1261 1115244 - 1115233 - g 95 -2.2 -6.11019 | AAAAAGGAAAAAAAA TGGA AAAA CCCA AACATCACATACTGG thx 1115232 - 1115558 + | Thx TERM 1262 1116191 - 1116201 + G 78 -2.4 -5.25803 | overlap 1116183 1116186 CAGGACGCCACCCGG ACCC GGC GGGA TTTTTTATACGGGTT TERM 1263 1116383 - 1116361 - g 70 -9.8 -3.31144 | GTTCCACGGCCACAA TGACCTTGGC ATG GCCACGGCCA ACGCCGTTACCGCTG nifV1 1115756 - 1116910 + | NifV1 HRM2_09770 1117444 - 1117121 - | hypothetical protein HRM2_09780 1117725 - 1117444 - | hypothetical protein TERM 1264 1117645 - 1117656 + g 74 -2.2 -5.14563 | opp_overlap 1117653 TGAACCATAGGAGCC GGAG CTAA CTTC TTTTTTGATAGAAGC TERM 1265 1117760 - 1117744 - R 70 -8.1 -3.73224 | opp_overlap 1117743 1117744 TGATCCTCCATTAAA GTATGAT TTA ATCATAC CTTTTTGAAAGGAGA iciA 1118711 - 1117815 - | IciA TERM 1266 1118738 - 1118754 + H 73 -5.3 -4.70319 | opp_overlap 1118743, overlap 1118743 TAGCATATCTGATGA TTAATTA AAA TAATTAA TTTTACTTTTAATCA TERM 1267 1118945 - 1118964 + G 70 -2.8 -4.82901 | GATTATCGCATTGAC CTGCATTG TGTG TGATGCGG TTTTTATCACAGCCG TERM 1268 1119040 - 1119052 + G 100 -4.7 -6.12458 | overlap 1119031 CCCAATGGGTCGCAT GGGGC GGC GCCGC TTTTTTGTTTTTTTA lysE1 1118820 - 1119416 + | LysE1 galT 1120614 - 1119541 - | GalT draG1 1121615 - 1120689 - | DraG1 TERM 1269 1120957 - 1120933 - G 89 -2.2 -5.79595 | gap 1, overlap 1120938 1120940 GTTGAAAATAAAAAA TGAAACACGGT CTGG ACCGTAT-CCA CCACATAGGCGGAAC TERM 1270 1120953 - 1120938 - G 71 -5.4 -4.53334 | overlap 1120933 1120940 AAATAAAAAATGAAA CACGGT CTGG ACCGTA TCCACCACATAGGCG TERM 1271 1121108 - 1121094 - G 73 -2.8 -5.03145 | overlap 1121098 1121100 CAAGTGGCCAAAAAA GATACA GGC CGCATC GGACAGGGGGTTGTT draT 1122514 - 1121636 - | DraT TERM 1272 1122692 - 1122745 + H 75 -2.1 -5.33866 | gap 1, opp_overlap 1122704 1122723 1122741, overlap 1122741 GTTTTATATCTGATT TTATATTACATATTTGTAATCAAATC ATA GATTTT-TAACAAAAATGAAATATAA TTTTTTATAAGTTTA HRM2_09840 1122971 - 1123216 + | hypothetical protein modA4 1123583 - 1124374 + | ModA4 modB 1124374 - 1125096 + | ModB TERM 1273 1125731 - 1125714 - gf 73 -5.5 -4.74103 | TTTCCAACGGAAAAA CACTGGC TGTG GGCAGTG TGGAAACGGTTTCGG TERM 1274 1125976 - 1126034 + GF 84 -11 -3.65351 | opp_overlap 1125976 1125978 1125992, overlap 1125977 CACCAGTTTTCAGAA TATCTTCCAGGGAATAGTTACAGGGATC AAC GATCCCTGTAACGGATCCCTGGTGAACG TTTCCCTGGACATCG TERM 1275 1126032 - 1125976 - gf 74 -9.6 -3.30441 | gap 2, opp_overlap 1125976 1125977, overlap 1125978 1125992 CACCAGTTTTCAGAA TATCTTCCAGGGAATAGTTACAGGGATC AAC GATCCCTGTAACGGATCCCTGGT-GA-A CGTTTCCCTGGACAT TERM 1276 1125977 - 1126033 + GF 89 -12.3 -2.78996 | opp_overlap 1125976 1125978 1125992, overlap 1125976 ACCAGTTTTCAGAAT ATCTTCCAGGGAATAGTTACAGGGATC AAC GATCCCTGTAACGGATCCCTGGTGAAC GTTTCCCTGGACATC TERM 1277 1126031 - 1125978 - gf 100 -14.7 -3.21924 | gap 1, opp_overlap 1125977 1125976, overlap 1125976 1125992 CCAGTTTTCAGAATA TCTTCCAGGGAATAGTTACAGGGATC AAC GATCCCTGTAACGGATCCCTGGT-GA ACGTTTCCCTGGACA TERM 1278 1126018 - 1125992 - gf 100 -18.2 -3.08798 | opp_overlap 1125977 1125976, overlap 1125978 1125976 ATCTTCCAGGGAATA GTTACAGGGATC AAC GATCCCTGTAAC GGATCCCTGGTGAAC modC 1124960 - 1126171 + | ModC HRM2_09880 1126219 - 1126680 + | acetyltransferase (GNAT family protein) TERM 1279 1126661 - 1126698 + T 95 -7.7 -4.95896 | gap 1, overlap 1126662 1126665 AGACGGACCTGGTTT G-TCTGACCCGGGAGATT TAA AGTCTTCCGGGCCTGATC TTTTTATGGGTTTCT TERM 1280 1126662 - 1126696 + T 100 -11.4 -4.08693 | overlap 1126661 1126665 GACGGACCTGGTTTG TCTGACCCGGGAGATT TAA AGTCTTCCGGGCCTGA TCTTTTTATGGGTTT TERM 1281 1126665 - 1126693 + T 83 -11.7 -3.05877 | overlap 1126662 1126661 GGACCTGGTTTGTCT GACCCGGGAGATT TAA AGTCTTCCGGGCC TGATCTTTTTATGGG HRM2_09890 1128070 - 1126712 - | pyridine nucleotide-disulphide oxidoreductase TERM 1282 1127881 - 1127897 + g 83 -5.1 -5.08601 | opp_overlap 1127881 1127875 CCTGATCAATAAAAC CCTGATC CGG GATGAGG TTTTTATTAACCTGG TERM 1283 1129486 - 1129509 + G 90 -15.4 -3.29144 | opp_overlap 1129489 1129491, overlap 1129489 ACGGTTATTCGCAGG GAACACCTGC CGCT GCAGGTGTTC TTGTCCGGGACGTCA TERM 1284 1129489 - 1129506 + G 82 -11.3 -3.78934 | opp_overlap 1129489 1129491, overlap 1129486 GTTATTCGCAGGGAA CACCTGC CGCT GCAGGTG TTCTTGTCCGGGACG TERM 1285 1129506 - 1129489 - g 74 -11.3 -3.06183 | opp_overlap 1129486 1129489, overlap 1129491 GTTATTCGCAGGGAA CACCTGC CGCT GCAGGTG TTCTTGTCCGGGACG HRM2_09900 1128328 - 1129722 + | sigma-54 dependent transcriptional regulator TERM 1286 1131081 - 1131067 - g 70 -10 -3.29273 | overlap 1131065 TTTATTATGACAACA TCCTGG GCG CCAGGA ATAAGAACACGATCA TERM 1287 1131576 - 1131594 + G 80 -4.4 -5.07652 | GAGAGTATCTCCCGG GCCGAGTG GGA CACACTGC TTTTCTTTTACGGGG nhaD2 1130121 - 1131986 + | NhaD2 TERM 1288 1132247 - 1132229 - f 81 -5.2 -5.21709 | opp_overlap 1132236, overlap 1132234 TGCCATAGGAAAAAA GAGGATGT CGG ACGCCCTC AGGGCATGCGATTAT TERM 1289 1132236 - 1132258 + F 72 -7.6 -3.78934 | opp_overlap 1132229 1132234 GGAAAAAAGAGGATG TCGGACGCCC TCA GGGCATGCGA TTATTGTACAACCAG TERM 1290 1132395 - 1132436 + F 100 -12.5 -6.02919 | gap 1, opp_overlap 1132379 1132394 GATATATACAATATG CCGGAAAAAGGGGGCCTG GTTTGGA CAG-CTTCCTTTTTCCGG TTTTTTTATTTATAA TERM 1291 1132990 - 1133002 + F 78 -10.5 -3.32343 | GAGCCATCTCTCGCC CCGGC CGT GCCGG TTATAAAGATATCAA HRM2_09920 1133036 - 1133269 + | hypothetical protein HRM2_09930 1133473 - 1134258 + | hypothetical protein TERM 1292 1134320 - 1134331 + T 78 -5.8 -4.90906 | opp_overlap 1134310 1134313 CACAAGACCCATGGG GCGT GGTG ACGC TTTTTAGTCTTCTGC TERM 1293 1134480 - 1134494 + T 86 -10 -3.92075 | overlap 1134453 1134452 CTTTGCCTGCAAGCC CAAGGG CCG CCCTTG TTTATAGCTCAGGAT HRM2_09940 1135310 - 1134531 - | enoyl-CoA hydratase/carnithine racemase [precursor] (Short chain enoyl-CoA hydratase) TERM 1294 1134610 - 1134628 + g 74 -11.8 -2.78463 | opp_overlap 1134609 1134608 TTGGTGGTGCAAAGT TGGGTGAA CAT TTCACCCA TGTAGTCCAGGGACT TERM 1295 1135001 - 1135016 + g 80 -4.6 -5.21709 | TGGCATATCCCCTGA CCGATG CGAT CACCGG TTTTTTCATCTGGGC aac 1137332 - 1135383 - | Aac TERM 1296 1137092 - 1137106 + g 83 -3.4 -5.44721 | opp_overlap 1137093, overlap 1137093 GGGCTCCAGAAAACC AGTCGG CCC CCGGCA TTTTTTTGGGGTCAT TERM 1297 1137352 - 1137402 + r 100 -22.8 -2.8092 | TTCTCCTGTGTATGG GGTCAGGCTTGCCTTGTTGTCGTT GGT AACGAGAACAAGACCAGCCTGACC TCTAATGGGCTATTA TERM 1298 1137533 - 1137545 + r 82 -10.5 -3.7282 | GGCAGATATCCTGCT CCGGC CAT GCCGG TTATTCGTAGAGTAC HRM2_09960 1138181 - 1137546 - | HTH-type transcriptional regulator TERM 1299 1137572 - 1137582 + g 70 -4.6 -4.60487 | opp_overlap 1137560 GTACGGCAAGTATGG TGGC CCT GCCG TTTTTACCCATGATC TERM 1300 1137706 - 1137724 + g 100 -11.8 -4.55697 | opp_overlap 1137702 ACATAGATGAACTCC TCTCCGTT GTG AACGGAGA TTTCTTTGTCCGGGT hmgL 1139418 - 1138285 - | HmgL TERM 1301 1139280 - 1139296 + g 73 -5.1 -4.63184 | opp_overlap 1139280 AACCGGCAAAGATCA GTTCTTC CAG GTAGAAC TTTTTAGCCTCCGTT mmc 1141100 - 1139511 - | Mmc TERM 1302 1140946 - 1140936 - G 74 -2.4 -5.07567 | TGAGAGTTCAAAAAA CTGG GTG CCCG GATCAATGAGTTCGT TERM 1303 1140972 - 1140984 + g 71 -6.2 -4.40692 | TTCGTTGATGAGTTC GCGG ACCGG CCGC TTGTTGTTTTTTGAA HRM2_09990 1141889 - 1141104 - | enoyl-CoA hydratase family protein acsL2 1143586 - 1141916 - | AcsL2 TERM 1304 1143013 - 1143024 + g 81 -5.8 -5.03715 | CATCGTCGGGTTCAA GGCT TGCC AGCC TTTTTTGAAGATCAT TERM 1305 1143407 - 1143436 + g 100 -15.7 -3.86346 | TTTCTCACCCCGCTG GATGCCGAGGGCC ATGA GGCCCTTGGCAAC TTTGTCGCAGACTCC TERM 1306 1143619 - 1143609 - R 76 -2.6 -5.40072 | TCCCCCCCAAAAAAA TTAA TGG TTAA CACCCGATATATCTT acd3 1144764 - 1143616 - | Acd3 HRM2_10020 1145023 - 1145676 + | transcriptional regulator (TetR-family protein) TERM 1307 1146198 - 1146181 - g 76 -7.7 -4.37502 | opp_overlap 1146181 1146192 ACGACCAGATCAAAA CCATGGA TTTT TCCACGG TGGATTTTGAGCGCC TERM 1308 1146830 - 1146810 - g 70 -4.5 -4.64144 | overlap 1146812 AACAAGTTTGAAAAA CGGGGCAGC GAA GACGCCCTG CGGGATGTGAGAAAA TERM 1309 1148194 - 1148204 + G 80 -2.4 -5.45802 | TTGACAGTTTTGCCC CGTC CCT GTCG TTTTTCTTTTCCAAC mcmL 1145754 - 1149029 + | McmL atoB2 1149112 - 1150287 + | AtoB2 TERM 1310 1150300 - 1150288 - f 80 -10.5 -3.4285 | overlap 1150281 GTAGTCAACCGATAA CCGGC ACG GCCGG AGCGAAGTATTTGCT TERM 1311 1150616 - 1150604 - f 78 -10.5 -3.31501 | AGGAATTTCTTATAA CCGGC ACG GCCGG AGTGAGGTATCTTCA TERM 1312 1150705 - 1150693 - f 80 -10.5 -3.48593 | GAGTGTTTCATATAA CCGGC ACG GCCGG AGCGAGGTATCTTCA HRM2_10050 1150798 - 1151646 + | 3-hydroxyacyl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD) pepP 1151673 - 1152872 + | PepP TERM 1313 1153073 - 1153084 + G 74 -7.2 -4.16182 | TGGGTTATCTGGCCT CGGC CTTT GCCG TTTCCTTTGTGCTGC TERM 1314 1153172 - 1153186 + G 91 -5.6 -5.38348 | CAGGCTATCTGACCT GTTCGG CAT CCGGGC TTTTTTACTGTTTTT HRM2_10070 1152934 - 1154118 + | quinolone resistance protein NorA-like protein TERM 1315 1154156 - 1154194 + T 89 -10.3 -4.04474 | overlap 1154159 TCCCATGGGGATGGG GCTCCGATCATGGGTGA ATCTG TTGCCCATGATCGGTGG TTTATGTCAGACTGT TERM 1316 1154159 - 1154191 + T 100 -15 -3.06418 | overlap 1154156 CATGGGGATGGGGCT CCGATCATGGGTGA ATCTG TTGCCCATGATCGG TGGTTTATGTCAGAC HRM2_10080 1155049 - 1154210 - | hypothetical cytidylate kinase nemA 1155489 - 1156580 + | NemA TERM 1317 1156982 - 1156960 - g 91 -16.3 -2.62396 | opp_overlap 1156956 1156957 CATCTCTGCAGACCA GCCCCCTGG GTTGT CCAGGGGGC AAATGATTTATGTGC TERM 1318 1157331 - 1157342 + G 74 -7.2 -4.22475 | overlap 1157338 GGATTTCCTTTACCT CCCG GGGC CGGG TTATTGTTTTAGATA TERM 1319 1157338 - 1157370 + G 73 -6.4 -4.45168 | overlap 1157331 CTTTACCTCCCGGGG CCGGGTTATTGTTT TAGAT AAAAAATAACCGGG TTTCTGTTTTGGGAC HRM2_10100 1156877 - 1157365 + | hypothetical protein HRM2_10110 1158428 - 1157391 - | NADP-dependent oxidoreductase TERM 1320 1158371 - 1158383 + g 84 -10.5 -4.07687 | CTTCAGGTACAGGGG CGCCC TTG GGGCG TTTTGCCAGGAGAAT HRM2_10120 1159631 - 1158474 - | iron-containing alcohol dehydrogenase TERM 1321 1159242 - 1159252 + g 70 -8.2 -3.78329 | CAATACGGCTCCCAT GGGC AAG GCCC TTTGGATTGGTGCAC HRM2_10130 1160255 - 1159647 - | transcriptional regulator (TetR-family protein) HRM2_10140 1160778 - 1160380 - | Glutaredoxin-related protein TERM 1322 1161181 - 1161171 - g 76 -6.8 -4.56729 | opp_overlap 1161171 AGGAAAATATTAAAA CAGG GAA CCTG TTCTTCTGCCATGCC TERM 1323 1161559 - 1161569 + G 70 -8.2 -3.65529 | overlap 1161547 CCTGCCCGAGGCGTT GGCG TTG CGCC TTTCCCTGGGGGTGT HRM2_10150 1160852 - 1161586 + | hypothetical protein spk 1162907 - 1161594 - | Spk TERM 1324 1162675 - 1162689 + g 77 -10 -3.7282 | opp_overlap 1162675 ACGAGAAGGGGAACA GGCCTT TTC AAGGCC TTCTTAATGGCATGG HRM2_10170 1163121 - 1162918 - | hypothetical protein TERM 1325 1163920 - 1163946 + G 73 -9.4 -3.72453 | overlap 1163939 CCGGGCGGTGGTGAA CTCGTGGATACC CCT GGTTTCAACGAG TTTGGGCTTGTTGAT engC 1163278 - 1164180 + | EngC TERM 1326 1164344 - 1164356 + T 89 -10.5 -4.04206 | GGCAGATACCATGCT CCGGC CGT GCCGG TTTATATGAAACTCG HRM2_10190 1165731 - 1164568 - | decarboxylase family protein TERM 1327 1165503 - 1165516 + g 76 -5.3 -4.83615 | CATAGATCGAGGCGA TGTCA AAAT TGACA TTTTTATCCCGCATC HRM2_10200 1165767 - 1165994 + | hypothetical protein TERM 1328 1166353 - 1166324 - g 70 -2.1 -4.90869 | gap 1 ACCATTAATGAAAAA CTTAACACGCCTCC CAG GGAA-CGGGTTGAG CATAAAACCATCAAG TERM 1329 1166405 - 1166419 + G 83 -5 -5.19328 | GATAAGGGGCTTGCC TTCAGC TAT GTTGAA TTTTTGTTCTCCGAT HRM2_10210 1166021 - 1166746 + | hypothetical protein TERM 1330 1166727 - 1166738 + T 71 -2.2 -5.15634 | AGGGGAAGGCACCGA CTGT AAAA ACGG TTTTTTGATCAGATC mcpA2 1168763 - 1166772 - | McpA2 TERM 1331 1167375 - 1167392 + g 74 -4.1 -4.93318 | overlap 1167363 1167372 ATGGGCGACCATCTC GTCTGTT ACGG AACGGGC TTTTTCTGAATTATG TERM 1332 1167929 - 1167942 + g 91 -3.1 -5.7946 | TCAGAAGAGTTGCAA TGACG ATTT TGTCA TTTTTTTGTTGAAAG HRM2_10230 1168918 - 1168760 - | hypothetical protein TERM 1333 1169254 - 1169264 + G 70 -8.2 -3.68036 | opp_overlap 1169254, overlap 1169252 CCACCCTTGGGGAAA CCGG GGT CCGG TATTTTGGCATCCTT TERM 1334 1169606 - 1169618 + G 76 -3.3 -5.1356 | overlap 1169607 GAAAACAGCCATTCT GCCCA TAG TGGGG TTTTTCTTGCTAAAG HRM2_10240 1169034 - 1169813 + | auxin efflux carrier family protein TERM 1335 1169952 - 1169962 + GF 93 -4 -5.75945 | CTTTTTGGTGTCAGG TTTG TTG CAAA TTTTTTTTCAGAGAT HRM2_10250 1169892 - 1170752 + | putative universal stress protein UspA TERM 1336 1170828 - 1170811 - gT 91 -6.9 -5.10497 | AATGTATCTAAAAAA GCCGGTA CTTC TCCCGGC ACCATGGTACATATC TERM 1337 1170896 - 1170866 - gT 76 -3.2 -5.18561 | GAAAGATTGAAAAAA CCCGGATCAGAATC ATG GATTACGATGGGGG TCAGATCCGGGAAAA TERM 1338 1171175 - 1171187 + GT 84 -6.3 -5.03961 | AGCAGTTCAGCATCA TTCTG GGG CAGAA TTTTGTTATTTCGTT corA1 1170628 - 1171842 + | CorA1 HRM2_10270 1174465 - 1171874 - | putative Na-K-Cl cotransporter TERM 1339 1172111 - 1172144 + g 87 -8.1 -4.85599 | overlap 1172109 ATTAAGGGCTTCCCG GGCTGCACGTGCT CGTTTTTC AGCCCGTTCAGCC TTTTTGTCGGCTGCC dnaJ1 1174635 - 1174799 + | DnaJ1 terC 1175796 - 1174792 - | TerC tpx 1176023 - 1176622 + | Tpx TERM 1340 1177841 - 1177829 - g 76 -3.3 -5.1615 | CTAACATCGAAAAAA GCCTT GCC ATGGC CACCTACCTGGTTCC fumC 1176619 - 1177968 + | FumC TERM 1341 1178204 - 1178185 - g 73 -2.8 -5.03145 | overlap 1178186 GAACGGCTCAAAAAA CTTGCCTG GAAC CAGCCAAA GGTAACTGAAGCTCC TERM 1342 1178402 - 1178383 - g 73 -5.6 -4.6856 | overlap 1178385 GAAACACCTGAAAAA CAGCAGGC ATTT GCCTGCAA AAATACGGGGTTCTT TERM 1343 1178400 - 1178385 - g 82 -10.4 -3.9442 | overlap 1178383 AACACCTGAAAAACA GCAGGC ATTT GCCTGC AAAAATACGGGGTTC TERM 1344 1178586 - 1178576 - g 71 -6.8 -4.15565 | overlap 1178577 GGGATGATTTTAAAA TGGC ACC GCCA AAATGGAGACGGCGG nfnB1 1177999 - 1178634 + | NfnB1 HRM2_10330 1178648 - 1179229 + | hypothetical protein TERM 1345 1179593 - 1179605 + G 71 -7.7 -4.07568 | CCCCCAATGAGGATC CCATC AAG GATGG TTTTCCCGGCAGGAA pldA 1179226 - 1180287 + | PldA HRM2_10350 1180455 - 1180877 + | hypothetical protein TERM 1346 1181281 - 1181302 + G 73 -5.9 -4.4874 | GTCTGCTCCACCTTT TTTTCATCG TTGC CGCTGAAAA TTTTACCTTTTTCCC TERM 1347 1181553 - 1181565 + G 100 -6.9 -5.54264 | TTTTCAGCCAGTGGC GGGGC AAT GCTCC TTTTTTTACGTATTT HRM2_10360 1180956 - 1181606 + | hypothetical protein TERM 1348 1181826 - 1181846 + G 74 -2.5 -5.09245 | overlap 1181828 TGGTGTAAAACATGT TTTTTCCAC GGT GTGGGGACA TTTTTCTGATTTTGA TERM 1349 1182044 - 1182029 - g 100 -3.2 -6.02546 | overlap 1182030 TTAAATCAAAAAAAA TCATCC ACAA GGATGG CAGCAACTATCTTGT TERM 1350 1182043 - 1182030 - g 71 -6.7 -4.19088 | overlap 1182029 TAAATCAAAAAAAAT CATCC ACAA GGATG GCAGCAACTATCTTG HRM2_10370 1181704 - 1182291 + | hypothetical protein HRM2_10380 1183151 - 1182327 - | putative potassium channel HRM2_10390 1184494 - 1183304 - | hypothetical protein TERM 1351 1183582 - 1183597 + g 70 -4.6 -4.60487 | TGTCCTTGAGAATTT CGGCCC AATC GGGTTG TTTTTGCAGGTAATA TERM 1352 1183725 - 1183751 + g 70 -2.2 -5.03314 | ATGCCTGAACAGTCT CTTCTGAGTTCA ATA TGGACGGGGAAG TTTTTTACCCCTGCC TERM 1353 1184756 - 1184766 + G 91 -5.4 -5.52986 | ATGCGCACCTGTCTC TACC TTA GGTA TTTTTTTCATAAAAT HRM2_10400 1184720 - 1185475 + | hypothetical protein HRM2_10410 1187920 - 1185518 - | beta-lactam acylase family protein precursor TERM 1354 1186152 - 1186141 - G 73 -5.8 -4.58685 | opp_overlap 1186140, overlap 1186129 AAACCGTTTGAAAAA TGGC CGGA GCCA CCTTGTCCGGGTCAT TERM 1355 1186826 - 1186837 + g 74 -2.2 -5.08255 | opp_overlap 1186817, overlap 1186817 CAAAAATCCCCGGGG GGCA GTCT TGTC TTTTATTTTAAGGGT HRM2_10420 1189349 - 1187940 - | signal transduction histidine kinase TERM 1356 1188987 - 1188997 + g 71 -6.8 -4.13654 | overlap 1188984 TCCATGGTCATCCTG TCCG AGA CGGA TTTGTGATTTCGGGA HRM2_10430 1190044 - 1189346 - | transcriptional regulatory protein TERM 1357 1189408 - 1189425 + g 100 -4.1 -5.94713 | TGATTGGAGGGTACT TATCACC GGGG GGGGATA TTTTTTTTCTCAAAT dgkA 1190442 - 1190026 - | DgkA TERM 1358 1190253 - 1190241 - GR 83 -3.3 -5.47218 | opp_overlap 1190247, overlap 1190242 TTTTACCGAAAAAAA GTGCC GCC GGCAA CCCGATTATCAGGGC HRM2_10450 1192217 - 1190379 - | sulfatase family protein TERM 1359 1190951 - 1190973 + gr 100 -11.9 -4.62069 | AATCGGTGTATTTTA CGGCGCCGG ACCGG CCTGCGCCG TTTTTGCCCTCACCG TERM 1360 1191077 - 1191064 - GR 100 -5.3 -5.69793 | ATATGAAAGAAAAAA GGTTT GTTT AAACC AGAAACCCTGTCAGC TERM 1361 1191805 - 1191789 - GR 100 -2.9 -5.86061 | overlap 1191792 GTCCAGGAAAAAAAA TGATGCC ACT GGAACCA GGAGCAGGCAGAGGG HRM2_10460 1193125 - 1192367 - | PAP2 family protein (acid phosphatase) TERM 1362 1192637 - 1192618 - G 74 -4.2 -4.80453 | overlap 1192628 CCATGACAAAATAAA GGGATACA AAGG CGTAGCCC CCGGAGGCATGGCCT TERM 1363 1193003 - 1192991 - G 83 -9.1 -4.38712 | TTGAGCGTCATAAAA GTGGG AAA CCCAC CAGATGTCGAGCCCG TERM 1364 1193069 - 1193058 - G 90 -5.8 -5.22794 | overlap 1193059 1193060 AGAATCAGTAAAAAA GGCA CCGT TGCC ATGGTGAAAAAACTA HRM2_10470 1194724 - 1193276 - | sigma-54 dependent two component DNA-binding response regulator (Fis family protein) TERM 1365 1194219 - 1194243 + g 79 -7.1 -4.59293 | GTTGTGACGATTTGC TGCACCTCGTC GAG GAAGAGCTGCA TTTCTTTGCTGTTTG HRM2_10480 1195013 - 1194801 - | hypothetical protein TERM 1366 1194982 - 1194994 + g 76 -5.5 -4.78077 | opp_overlap 1194975 AAAAAAATCATGGAG GCACG GGA TGTGC TTTGTTTTGGTTGAA HRM2_10490 1195086 - 1195259 + | hypothetical protein TERM 1367 1195474 - 1195488 + G 70 -4.9 -4.64766 | opp_overlap 1195471 1195474, overlap 1195476 TATGGGAAAAAGCAT GGCCT GCCAA GGGCC TTTTTGACCTATGGG TERM 1368 1196078 - 1196060 - g 91 -8.8 -4.82901 | opp_overlap 1196074 TCTTTTGCACAAAAA GGGGATGC TTC GCATCACC ACCGTGCTTGTGGAT HRM2_10500 1195416 - 1196378 + | putative cellulose biosynthesis protein CelD TERM 1369 1196513 - 1196497 - g 70 -8.7 -3.64283 | overlap 1196486 1196498 CAAAGGGCCGAAGAA CCCTTCC CTG GGAAGGA AGAGGAGATGCTTTG TERM 1370 1197275 - 1197290 + G 84 -4.6 -5.2189 | opp_overlap 1197263, overlap 1197261 TGACTCCCCGGCCCG GGGGGG ATTG CCTTCC TTTTTTGCTGGTTGA argH1 1196371 - 1197651 + | ArgH1 TERM 1371 1198733 - 1198715 - g 76 -7.3 -4.3208 | CGGTACAATGGAAAA GCCCTGC CATGT GCTGGGC TCACTGTGCACACCC lysA2 1197654 - 1198886 + | LysA2 TERM 1372 1199169 - 1199190 + T 90 -11.5 -3.61331 | overlap 1199167 TGGAACGATTGATTC GGGGAAGGC TGTT GCCTCCCCC TCTGTTTTATTTAAA HRM2_10530 1199746 - 1199207 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 1373 1199922 - 1199912 - R 80 -2.6 -5.50313 | TATAAAAGCAAAAAA TATT GAA AATA GTCGGGAATAACGGA HRM2_10540 1200855 - 1200085 - | putative cytidylate kinase TERM 1374 1200188 - 1200198 + g 80 -3.2 -5.31275 | AGGTCAAATTCATAG GGTG AGG CATC TTTTTTATCATACAC TERM 1375 1200424 - 1200451 + g 82 -7.8 -4.7254 | overlap 1200425 GGCAAGGGCCACGAC TGATTTTGCAAG CTGC CTTGCATAATCG TTTTTCATAAAGGAT TERM 1376 1201573 - 1201583 + G 70 -8.2 -3.79874 | opp_overlap 1201573 1201572, overlap 1201574 1201576 TGATTCTATTTAAAC CCGG GAC CCGG TTGTCTTATATCAAC TERM 1377 1201925 - 1201905 - g 91 -7.5 -5.08824 | opp_overlap 1201913, overlap 1201908 TCTCCACCCAAAAAA CGAGTGGCT GCC AGCCACCTG GCCTTCAATTTTGTG TERM 1378 1201922 - 1201908 - g 72 -10 -3.39842 | opp_overlap 1201913, overlap 1201905 CCACCCAAAAAACGA GTGGCT GCC AGCCAC CTGGCCTTCAATTTT TERM 1379 1202264 - 1202274 + G 71 -5.4 -4.57073 | opp_overlap 1202264 ATCCCTCAATATAAA CAAG ACA CTTG TTTTTGAGGAACCTC HRM2_10550 1201182 - 1202855 + | putative Na+/Phosphate-cotransporter TERM 1380 1203687 - 1203697 + G 70 -8.2 -3.73386 | overlap 1203689 CCTGGGTACCTTTCT GGCC GTG GGCC TTTCCATGGTTGTAT HRM2_10560 1202965 - 1205526 + | solute carrier family protein HRM2_10570 1206720 - 1205701 - | putative metal-dependent hydrolase (beta-lactamase family II protein) TERM 1381 1206796 - 1206739 - R 100 -13.1 -3.51976 | opp_overlap 1206759, overlap 1206740 1206743 1206759 AACCTCGCAAATTAA TTTATCATCATTAAAAAAAATTAGCCG GTTT CGGCTAATTTTTTTTAATGATGCGACT CAAACACTATAAAAG TERM 1382 1206795 - 1206740 - R 100 -16.6 -2.70704 | opp_overlap 1206759, overlap 1206739 1206743 1206759 ACCTCGCAAATTAAT TTATCATCATTAAAAAAAATTAGCCG GTTT CGGCTAATTTTTTTTAATGATGCGAC TCAAACACTATAAAA TERM 1383 1206792 - 1206743 - R 100 -22.7 -2.6342 | opp_overlap 1206759, overlap 1206740 1206739 1206759 TCGCAAATTAATTTA TCATCATTAAAAAAAATTAGCCG GTTT CGGCTAATTTTTTTTAATGATGC GACTCAAACACTATA TERM 1384 1206776 - 1206759 - R 100 -9.9 -5.88471 | opp_overlap 1206759, overlap 1206743 1206740 1206739 CATCATTAAAAAAAA TTAGCCG GTTT CGGCTAA TTTTTTTTAATGATG TERM 1385 1206759 - 1206776 + r 100 -9.9 -5.88471 | opp_overlap 1206743 1206740 1206739 1206759 CATCATTAAAAAAAA TTAGCCG GTTT CGGCTAA TTTTTTTTAATGATG HRM2_10580 1207180 - 1206803 - | hypothetical protein TERM 1386 1208720 - 1208744 + G 76 -2.7 -5.09895 | ATTCTGTACTCCGCG CCTTCAGTGGG AAG CGTACCGAGGG TTTTTTCAGTGACTG HRM2_10590 1207579 - 1209474 + | putative cysteine protease HRM2_10600 1209724 - 1209545 - | hypothetical protein TERM 1387 1209765 - 1209779 + H 81 -4.2 -5.31519 | overlap 1209766 1209767 CGAAATATTTTTTAC TTGCTC TGG GAGCGG TTTTTCTTTAAATAT TERM 1388 1210193 - 1210177 - g 70 -8.7 -3.55444 | overlap 1210192 GCGGGATGCCGTAAA GGCCCTT GGC AAGGACC CCGCATCGGTGAACC TERM 1389 1211097 - 1211127 + G 74 -11.2 -3.14132 | AGCCCATCAGGATTG GTGATGGCAGCA TCGTCAT TGCCGCCATCAC TTCGTGCACCAACAC acnA 1209860 - 1212508 + | AcnA HRM2_10620 1212568 - 1212792 + | hypothetical protein lysA3 1212820 - 1214070 + | LysA3 HRM2_10640 1214940 - 1214089 - | rhodanese-like domain protein TERM 1390 1214126 - 1214165 + g 76 -11.4 -3.27215 | AGACCGTCCATGAGT TCTCCCAGGTGGACAAGG TGGC TCTTTTCCTCCTGGGCGA TTCGTGTGAGGATTT gpsA1 1217421 - 1214944 - | GpsA1 TERM 1391 1215100 - 1215111 + g 70 -2.2 -5.00616 | ACCCTCTTCGATCCA CTGG AGGT TCAG TTTTTTGACAACCCG TERM 1392 1216735 - 1216722 - G 78 -3.7 -5.06816 | opp_overlap 1216726, overlap 1216723 1216724 ACGCTTCAAGAAAAA TGCCC TGCT GGGCC CCGGCCCGGCTCAGG HRM2_10660 1217571 - 1217915 + | putative translation initiation factor SUI1 TERM 1393 1218436 - 1218426 - g 71 -6.8 -4.17296 | CGGCAGACAGATAAA CCTG ATC CAGG TGGTGAATCCACTCA HRM2_10670 1218061 - 1218750 + | hypothetical protein HRM2_10680 1218766 - 1219002 + | 2-oxoisovalerate ferredoxin oxidoreductase, delta subunit TERM 1394 1219282 - 1219299 + G 74 -2.5 -5.08601 | overlap 1219283 TGAGCTATATTGCAG GGGCCCG CTGT CCGGCCG TTTTTGTTAACATCA HRM2_10690 1219002 - 1220075 + | 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit HRM2_10700 1220102 - 1220842 + | keto/isovalerate ferredoxin oxidoreductase, beta subunit HRM2_10710 1220878 - 1221414 + | pyruvate ferredoxin/flavodoxin oxidoreductase family protein TERM 1395 1221850 - 1221874 + G 74 -3.5 -5.0538 | overlap 1221854 TATGGATCGGTCTCT CCGGCAGATAC CAA GTGTCTGTTTG TTTTTTCCCCTGAAG TERM 1396 1221854 - 1221870 + G 87 -7.3 -5.05153 | overlap 1221850 GATCGGTCTCTCCGG CAGATAC CAA GTGTCTG TTTGTTTTTTCCCCT HRM2_10720 1221442 - 1221918 + | ACT domain-containing family protein TERM 1397 1221926 - 1221959 + T 100 -25.5 -2.62515 | overlap 1221928 TTTTTTAGTGTCTGA GATGTGGGGGACACC TTCG GGTGTCCCCCACATC TCCTATGACCCCGTT TERM 1398 1221928 - 1221957 + T 100 -22.3 -2.85351 | overlap 1221926 TTTTAGTGTCTGAGA TGTGGGGGACACC TTCG GGTGTCCCCCACA TCTCCTATGACCCCG acd4 1223131 - 1221992 - | Acd4 TERM 1399 1222300 - 1222322 + g 71 -6.3 -4.41355 | ATCTTATACCCTGGT GGTTGGCAA TGGCC TTGCCAAAC TGTTTTCTTTTTTTT HRM2_10740 1223698 - 1223150 - | transcriptional regulator (XRE family protein) TERM 1400 1223850 - 1223814 - R 100 -12.6 -5.75478 | gap 1, overlap 1223837 AATCAGATAAAAAAA GGGTTGTCA-AGAATTT GAAT AAATTCCATGACAACCC TTGGAACAGCTTCCT HRM2_10750 1224977 - 1223916 - | branched-chain amino acid aminotransferase TERM 1401 1224599 - 1224609 + g 100 -6.8 -5.40072 | overlap 1224593 AGGTGCCCGGGGTCT CTGG GAT CCAG TTTTTTTCAAGGCGA TERM 1402 1225076 - 1225062 - H 71 -8.6 -3.53761 | opp_overlap 1225053 CAATTTCTCTTTAAA GGGTTA TTT TAACCC CGGATTACCGGTTAG TERM 1403 1225947 - 1225928 - g 76 -6.4 -4.72272 | CTTGCCGAGGAAAAA GCCGCT GCGGAAAA AGCGGC TGCTGAAAAAATAGC HRM2_10760 1225352 - 1226227 + | hypothetical protein TERM 1404 1226247 - 1226276 + T 100 -7.8 -5.5454 | opp_overlap 1226247 CAGTAACACCTGAAA TCCCTGGGGCGT AAATTC ATTCCCCGGGGA TTTTTATTTGTTTGA HRM2_10770 1226576 - 1226280 - | HNH endonuclease family protein TERM 1405 1226309 - 1226336 + g 90 -6.2 -5.27779 | gap 1, overlap 1226312 GGGTCTGCATGTATT CGTCCCACTCCAG GGG CAGGAGTTGG-CG TTTTTTAGTGTTGCA era 1227480 - 1226578 - | Era TERM 1406 1227333 - 1227348 + g 84 -4.6 -5.33848 | CGCCGAGAATTCTGT CCCTGG TGGT CTGGGG TTTTTTGCTTGTGAT engB 1228091 - 1227507 - | EngB TERM 1407 1227937 - 1227949 + g 72 -4.1 -4.7629 | overlap 1227934 CCGGGTTTGGAGCTT GTCTT GAC AAGGC TTTTTCGGTTGATCA aspC2 1229272 - 1228088 - | AspC2 TERM 1408 1228306 - 1228332 + g 70 -4.5 -4.68384 | gap 2, opp_overlap 1228299, overlap 1228299 1228299 CATAAAAGGCGCCGG TGGGCTCATTGGT AAT GCCAA-G-GCCCA TTTTCTTGAGTCGGT hisG 1230147 - 1229272 - | HisG TERM 1409 1230094 - 1230129 + g 100 -12.6 -4.46432 | overlap 1230096 CTTGAAAAGGGCGAT CGTGGCATCCTGAAGG CTTC CCTTAGGGATGCCAAG TTTTAATAGTTTTTT TERM 1410 1230096 - 1230127 + g 77 -13.8 -2.53625 | overlap 1230094 TGAAAAGGGCGATCG TGGCATCCTGAAGG CTTC CCTTAGGGATGCCA AGTTTTAATAGTTTT hisI 1230521 - 1230144 - | HisI TERM 1411 1231731 - 1231748 + G 83 -9.1 -4.3739 | GTCAAGCACCTTGCA GGCCTTG AGGT CGAGGCC TTTTGTGCACAAGTG mrcA 1230687 - 1233083 + | MrcA HRM2_10840 1234144 - 1233065 - | radical SAM domain family protein TERM 1412 1233947 - 1233936 - G 73 -3 -5.055 | GTAAGCCCTAAAAAA TTTC CACC GAAA AAGGCAAGCTCTACT HRM2_10850 1235710 - 1234148 - | two domain fusion protein Includes: metal-dependent phosphoesterase / ribonuclease III TERM 1413 1234317 - 1234327 + g 70 -4.6 -4.72272 | overlap 1234307 ATGGTGTAACAGGGA GGCG TGT TGCC TTTTTCCTGGACAAA dksA3 1236086 - 1235724 - | DksA3 hemA 1237504 - 1236218 - | HemA ccmC1 1238386 - 1237607 - | CcmC1 cysG 1239105 - 1238440 - | CysG TERM 1414 1238678 - 1238693 + g 93 -4 -5.75342 | opp_overlap 1238671, overlap 1238671 GGGCCAAACCGGCCT TCAAGC TGGT GTTTGA TTTTTTTTGCAAAGG TERM 1415 1238994 - 1239017 + g 93 -13.8 -4.04319 | GACTCACCACCTTGA CCCTGGCCCG GCAA CGGGCAAGGG TTTCTGCCTTTCTGG HRM2_10900 1239249 - 1240100 + | putative metal-dependent hydrolase TERM 1416 1240663 - 1240675 + T 78 -10.5 -3.29043 | GAGCCATACCTCGTT CCGGC CGT GCCGG TTATAGGAAAAGGTT HRM2_10910 1241728 - 1240676 - | dihydrouridine synthase family protein TERM 1417 1241630 - 1241644 + g 100 -7.8 -5.44721 | opp_overlap 1241629 1241630 GGGGGCAAGAAAGAG GCGGTT GCT GACCGC TTTTTTTCCGATGGT TERM 1418 1241680 - 1241705 + g 70 -4.5 -4.59946 | overlap 1241658 1241681 CCTGGGCTATCCCCG GGGGGCAGGTT TCAT ATCCGGCCCCG TTGTTTTGTTGTTTT fur 1241840 - 1242826 + | Fur feoB1 1242823 - 1244994 + | FeoB1 HRM2_10940 1245039 - 1245506 + | hypothetical protein TERM 1419 1245660 - 1245649 - g 78 -2.2 -5.24531 | overlap 1245655 1245656 ACCCGTTACAAAAAA CAGA TAGC CCTG GGAATAGGGGCGATT TERM 1420 1245677 - 1245691 + G 74 -3.5 -5.00616 | GAATAGGGGCGATTG TGGCT ATTGC GGCCA TTTTTTCAGGGACCC HRM2_10950 1245544 - 1246224 + | hypothetical protein TERM 1421 1246279 - 1246247 - T 100 -15.7 -4.87318 | opp_overlap 1246227 1246247 TTTAAAACTTAAAAA GGCTGCCTTTGAAAA AAG TTTCCAAGGGCAGCC TTTTTAAGAAAAGGA TERM 1422 1246247 - 1246279 + T 100 -15.7 -4.56597 | opp_overlap 1246247, overlap 1246227 TTTAAAACTTAAAAA GGCTGCCTTTGAAAA AAG TTTCCAAGGGCAGCC TTTTTAAGAAAAGGA HRM2_10960 1246591 - 1246436 - | hypothetical protein HRM2_10970 1247987 - 1246620 - | sigma-54 dependent transcriptional regulator HRM2_10980 1249408 - 1247987 - | two-component hybrid sensor and response regulator histidine kinase (Ntr family) pilM 1249627 - 1250685 + | PilM pilN 1250682 - 1251263 + | PilN TERM 1423 1251287 - 1251274 - gf 84 -2.3 -5.67529 | AATGAAAAATAAAAA CAAGG AGAG CCTGG GCGCTAAAATCGGTA TERM 1424 1251340 - 1251307 - gf 79 -6.7 -4.66264 | overlap 1251298 1251310 TAAAATCGGTAAAAA GACCGCCCCGATTTT TGAA AAAATCGGGGACCTC TCAATGGTTCAGAGA TERM 1425 1251454 - 1251443 - gf 70 -4.4 -4.68424 | opp_overlap 1251443 GAACGCATGGAAAAA CTTG AAAA CAAG CTTGCTTCCCTGAAA TERM 1426 1251610 - 1251640 + GF 72 -6.1 -4.40333 | gap 1, opp_overlap 1251611 1251615, overlap 1251606 1251611 GCTGTTGACCGGAAT ATCAAGCTCCGGCA GTGA TGCCGG-GCTGGAG TTTCTCTTGTTTCAA TERM 1427 1251611 - 1251639 + GF 72 -9.6 -3.23115 | gap 1, opp_overlap 1251611 1251615, overlap 1251610 1251606 CTGTTGACCGGAATA TCAAGCTCCGGCA GTGA TGCCGG-GCTGGA GTTTCTCTTGTTTCA TERM 1428 1251639 - 1251611 - gf 71 -9.6 -3.05844 | gap 1, opp_overlap 1251611 1251610 1251606, overlap 1251615 CTGTTGACCGGAATA TCAAGCTCCGGCA GTGA TGCCGG-GCTGGA GTTTCTCTTGTTTCA TERM 1429 1251635 - 1251615 - gf 71 -9 -3.37245 | gap 1, opp_overlap 1251611 1251610 1251606, overlap 1251611 TGACCGGAATATCAA GCTCCGGCA GTGA TGCCGG-GC TGGAGTTTCTCTTGT pilO 1251209 - 1251904 + | PilO TERM 1430 1251913 - 1251902 - g 100 -4.4 -5.70522 | AAGAAGAAGAAAAAA TGAG AGAC CTCA TGCATGCATGGATTA pilP 1251901 - 1252557 + | PilP TERM 1431 1252622 - 1252632 + G 76 -3.2 -5.13354 | overlap 1252614 1252613 AAGGGGTCTGCCTGA TGCT GGC AGCG TTTCTTTTTTGTGGA TERM 1432 1254669 - 1254685 + G 73 -9.4 -3.66803 | CTCTTCAACGTCTGA GACCGG TTTTC CCGGTC TTTCAAATATTCCGC pilQ 1252621 - 1254804 + | PilQ TERM 1433 1255285 - 1255317 + T 95 -14.2 -2.80589 | overlap 1255282 1255282 AGTTTCAAATTTCAT TGTGGCCGGAGCAG ATCCC CTGCTCTGGCCATG TCCGTTTATTTAAAA HRM2_11040 1256088 - 1255348 - | TPR repeat domain protein TERM 1434 1255492 - 1255502 + g 80 -2.4 -5.51165 | AGCATAAAGGATCGA AGCC TGG GGCA TTTTTTTCAGCTTTT TERM 1435 1255641 - 1255651 + g 71 -5.4 -4.57569 | AGTTTTTTTCTGCAA GGAT ATA ATCC TTTTTGCCCAGATAG HRM2_11050 1257540 - 1256098 - | hypothetical protein TERM 1436 1256444 - 1256459 + g 79 -7.6 -4.57569 | opp_overlap 1256437 ACAAAAAGGTCAGGT TTTCCC TGGC GGGAAA TTTTTCCGACCCTGA TERM 1437 1256706 - 1256728 + g 85 -4 -5.40072 | opp_overlap 1256695, overlap 1256707 AGAAGGTGCGGATGG CCGCTGCCAG GGT CTGGTAGAGA TTTTTTTCAGGAACC TERM 1438 1257334 - 1257306 - G 85 -7.5 -4.84761 | opp_overlap 1257307, overlap 1257307 ACATGGTCAGAAAAA GGGGGAAATCT TTTTCTG AGATTTCCCCT TTTTGCCTGAAAATC TERM 1439 1257333 - 1257307 - G 79 -11 -3.50133 | opp_overlap 1257307, overlap 1257306 CATGGTCAGAAAAAG GGGGAAATCT TTTTCTG AGATTTCCCC TTTTTGCCTGAAAAT TERM 1440 1257307 - 1257333 + g 100 -11.7 -4.66163 | opp_overlap 1257307 1257306 CATGGTCAGAAAAAG GGGGAAATCTT TTTCT GAGATTTCCCC TTTTTGCCTGAAAAT thrC 1259042 - 1257537 - | ThrC TERM 1441 1257607 - 1257642 + g 100 -6.8 -5.24416 | gap 1, opp_overlap 1257607, overlap 1257610 GCAAACCGGTTAAAA TCTTCCCTGCCAAGGGG GGT TCCCT-GGCCGGGGATA TTTTTCTTGTCCTTG TERM 1442 1257610 - 1257640 + g 83 -9.6 -4.2328 | opp_overlap 1257607, overlap 1257607 AACCGGTTAAAATCT TCCCTGCCAAGGGG GGT TCCCTGGCCGGGGA TATTTTTCTTGTCCT TERM 1443 1258313 - 1258285 - G 72 -3.8 -4.80882 | gap 1, opp_overlap 1258287, overlap 1258287 ACCTCATAGGAAAAA GACTCCTGGC-CA AGGA TGCGCCAGGCGTT CTTTGAGTTGAGCAA serS 1260312 - 1259029 - | SerS TERM 1444 1260192 - 1260203 + g 100 -4.4 -6.06723 | CTTCGATCTGCTGAA GAAG TTCT CTTC TTTTTTTTTCCGCCC TERM 1445 1260698 - 1260717 + G 76 -6.4 -4.66833 | opp_overlap 1260700, overlap 1260700 AGCCTTGATGTCAGA AAGGGGAT AGTG ATCCCCTG TTTTTCAGATTCAAG TERM 1446 1260715 - 1260700 - g 75 -9 -3.89346 | opp_overlap 1260698 1260700 CCTTGATGTCAGAAA GGGGAT AGTG ATCCCC TGTTTTTCAGATTCA TERM 1447 1260700 - 1260715 + G 75 -9 -3.94933 | opp_overlap 1260700, overlap 1260698 CCTTGATGTCAGAAA GGGGAT AGTG ATCCCC TGTTTTTCAGATTCA TERM 1448 1260842 - 1260829 - g 79 -6.7 -4.64657 | overlap 1260831 TGAAACCTGCAAAAA GGTCA ATCT TGACC AGATCGATATTGCAG HRM2_11080 1260479 - 1261066 + | 5-formyltetrahydrofolate cyclo-ligase (5,10-methenyl-tetrahydrofolate synthetase) (Methenyl-THF synthetase) (MTHFS) TERM 1449 1261071 - 1261101 + T 95 -11.3 -3.90744 | gap 1, overlap 1261074 ACAAGATATAGCCGG CATGGAGGGAACGA TCGC TTGTTCCCTCC-TG TTATTTGGGGGCAAG TERM 1450 1261074 - 1261099 + T 100 -14.1 -3.54488 | overlap 1261071 AGATATAGCCGGCAT GGAGGGAACGA TCGC TTGTTCCCTCC TGTTATTTGGGGGCA trkA1 1262103 - 1261102 - | TrkA1 TERM 1451 1261674 - 1261688 + g 76 -2.7 -5.08824 | CCTCCACAAGGACAG GCACG AGTTC CGGGC TTTTTTCCATGACAA TERM 1452 1262328 - 1262341 + G 74 -4.5 -4.87665 | opp_overlap 1262328 TGCCGCCATGGAAAC GGTGC CCCG GCATC TTTTTGTGAGTGAGG TERM 1453 1262721 - 1262746 + G 84 -13.3 -3.39327 | overlap 1262725 CCAACCTCTCCTTGA CCAGCTTGCCG TGGG CGGCAGGTTGG TTATGCCTGTGGGAG pcm 1262221 - 1262877 + | Pcm TERM 1454 1262914 - 1262943 + G 100 -8.5 -6.11243 | overlap 1262911 ACTGGGTTCTTTCCT GGGCCGAGAGACC GGGT GGTGTCTGGGCTC TTTTTTTTCTTGCCT HRM2_11110 1262880 - 1263461 + | hypothetical protein HRM2_11120 1263474 - 1263851 + | hypothetical protein lysR 1264761 - 1263862 - | LysR coaD 1265267 - 1264764 - | CoaD HRM2_11150 1265852 - 1265283 - | putative small methyltransferase TERM 1455 1265551 - 1265528 - G 74 -11.6 -3.14211 | opp_overlap 1265520 ACTTTTTTGGACGAA TCCGGGCGAG GGTG CCCGCCCGGG TCAGGTCATGTTGGA HRM2_11160 1267201 - 1265849 - | transcriptional regulator (FIS family protein) HRM2_11170 1269472 - 1267244 - | putative nitrogen regulation protein (PAS/PAC domain protein) TERM 1456 1268692 - 1268648 - G 73 -12.1 -2.68823 | opp_overlap 1268676, overlap 1268647 GTCCTGGGAGATAAG GGCTGTGACCACAAGAAAGGC GTC GCTTTTCTGGGGGTCACCACC AAAGGGAATGGTGGT HRM2_11180 1270080 - 1269493 - | hypothetical protein TERM 1457 1269576 - 1269590 + g 70 -11.4 -2.53911 | opp_overlap 1269574 1269573, overlap 1269564 AGTGGAGGTAAAGGG GCAGGG TGA CCCTGC TCAGTTCCGCCTTGA lpxC 1270964 - 1270077 - | LpxC TERM 1458 1271940 - 1271952 + G 70 -10.5 -2.91276 | overlap 1271939 1271948 TGGTGGGCCTTCTTG GGCCG GGT CGGCC GTTTATGAGCAAAAG TERM 1459 1272696 - 1272683 - g 76 -6.7 -4.55689 | overlap 1272685 1272686 AGCATTGACAGAAAA GATCC CCTG GGATC CTATAACCCGGGGCA HRM2_11200 1271162 - 1272718 + | Mg chelatase-related protein hslO 1272733 - 1273665 + | HslO HRM2_11220 1273789 - 1274091 + | hypothetical protein TERM 1460 1275124 - 1275152 + G 95 -14.7 -3.92542 | CTCTACGAGTTTGAT CCGGCAATGGT GAAAAAG ACCATTGCCGG TTATTTCGGGATCAA TERM 1461 1275350 - 1275362 + G 72 -4.1 -4.88495 | GTTTTCTTCCACCCC TTTCC ACG GGAGA TTTTGTTCTGTGTAT iorA1 1274119 - 1275969 + | IorA1 iorB1 1275998 - 1276609 + | IorB1 TERM 1462 1276748 - 1276737 - g 71 -5.8 -4.34711 | AAAATTAAGGGAAAA GGGT ATCT ACCC CACGACCATGGCTGA TERM 1463 1277166 - 1277148 - g 100 -3.1 -6.32216 | gap 1, overlap 1277150 1277151 AGAGACAAAAAAAAA GATCCAGG CAGC CCTGG-CC TATCCGGTGCTCATG TERM 1464 1277165 - 1277150 - g 74 -4.6 -4.78442 | overlap 1277148 1277151 AGACAAAAAAAAAGA TCCAGG CAGC CCTGGC CTATCCGGTGCTCAT gspF1 1276633 - 1277868 + | GspF1 HRM2_11260 1279199 - 1278135 - | hypothetical protein TERM 1465 1279321 - 1279335 + r 72 -6.4 -4.34488 | TATCTTAAGGGTGAA GAGCTC CAT GAGTTC TTTGTTGTCCATCTG HRM2_11270 1282014 - 1279303 - | SNF2-related helicase TERM 1466 1279960 - 1279971 + g 87 -4.4 -5.41143 | GTCGGAACATTCAAG CTTG TCTG CAAG TTTTTTTACAAAATC TERM 1467 1280884 - 1280916 + g 74 -9.7 -3.61328 | opp_overlap 1280877, overlap 1280874 CGGATGAAGCTTGAG GGCCAGGGCTTCACC AAT GGTGAGGGCCCCGCC TTTAGCCATCTTCAT HRM2_11280 1283177 - 1282140 - | hypothetical protein TERM 1468 1282370 - 1282347 - G 74 -6.6 -4.30719 | overlap 1282352 TGTGTTCAGAACAAA CGAAACCAGG GCAT CCTGGTAACG CTCGCAGTAGAAAAA TERM 1469 1282365 - 1282352 - G 76 -8.1 -4.24422 | overlap 1282347 TCAGAACAAACGAAA CCAGG GCAT CCTGG TAACGCTCGCAGTAG TERM 1470 1282399 - 1282386 - G 73 -3.1 -4.91109 | CTCGCAGTAGAAAAA TCCCA TGCC TGGAA ATATTGCCGTAAGCC TERM 1471 1282410 - 1282431 + g 100 -7.9 -6.36459 | overlap 1282412 TGGAAATATTGCCGT AAGCCCCGC TAGG GTGGGGCTC TTTTTTTTTGTTGCA TERM 1472 1282412 - 1282429 + g 100 -10.5 -4.81831 | overlap 1282410 GAAATATTGCCGTAA GCCCCGC TAGG GTGGGGC TCTTTTTTTTTGTTG HRM2_11290 1283629 - 1283219 - | hypothetical protein TERM 1473 1283262 - 1283278 + g 95 -12.3 -4.32951 | TTTGCCGAGACCGGG TCCAGGG TTA CCCTGGA TTTGTTGATTACGAT gspE1 1285307 - 1283613 - | GspE1 TERM 1474 1284898 - 1284913 + g 71 -5.4 -4.56597 | AACATGGTGTTGATG GCGGAA AGAA TTTCGC TTTTTGGGGCAAGAA gspD1 1287265 - 1285304 - | GspD1 TERM 1475 1286303 - 1286315 + g 80 -3.3 -5.28481 | CACCATGTCCGAGAT GACCG GGG CTGTC TTTTTTCCTTCGGTG TERM 1476 1286328 - 1286340 + g 83 -3.3 -5.40072 | GTCTTTTTTCCTTCG GTGCT CTG GGCGC TTTTTTTCACGGGCA TERM 1477 1286424 - 1286436 + g 100 -9.1 -5.60993 | ACTCGAATCTTTTCG TCCCC CCT GGGGA TTTTTTTATCCAGAA TERM 1478 1286452 - 1286463 + g 78 -5.8 -4.85599 | opp_overlap 1286452 TTTTTTTATCCAGAA GGCT GACC AGCC TTTTTATCCGGTCGG gspC 1288112 - 1287255 - | GspC HRM2_11330 1288981 - 1288109 - | hypothetical protein TERM 1479 1288869 - 1288893 + g 73 -6.3 -4.56597 | GTGATGTTGTTGAGT CGTTGGGCCAT GAT GTGGCCTGCCG TTTTTCCGGGAAAAA HRM2_11340 1289511 - 1288978 - | hypothetical protein HRM2_11350 1290956 - 1289523 - | putative general secretion pathway protein L TERM 1480 1290473 - 1290488 + g 70 -4.6 -4.62069 | opp_overlap 1290473 CCTGAATGGTGATAA GGGCTG GTTT CAGACC TTTTTCCCCTAGGGG gspK1 1292075 - 1290957 - | GspK1 TERM 1481 1291110 - 1291122 + g 70 -3.3 -4.88495 | opp_overlap 1291111, overlap 1291111 CGAGTAAGTGATCAG ACGGT CGA ACCGC TTTTCTTCTGTATCT gspJ1 1292887 - 1292081 - | GspJ1 HRM2_11380 1293248 - 1292835 - | putative general secretion pathway protein HRM2_11390 1293918 - 1293232 - | putative general secretion pathway protein gspG1 1294273 - 1293830 - | GspG1 TERM 1482 1293948 - 1293962 + gH 78 -10 -3.40843 | overlap 1293946 CACAGATAGAGGTAT TCCCTG CTC CAGGGA TCTTTAGGCATTTTC HRM2_11410 1294614 - 1295228 + | hypothetical protein ubiE3 1295947 - 1295243 - | UbiE3 dnaJ2 1296094 - 1297194 + | DnaJ2 ptpS 1297240 - 1297623 + | PtpS pyrE 1298230 - 1297676 - | PyrE ftsE 1298512 - 1299198 + | FtsE TERM 1483 1299305 - 1299317 + GF 78 -9.1 -3.81111 | overlap 1299298 TGCCCTGTCCATTCT GGTGG TTT CCACC TTTGCCCTTTTCTTT TERM 1484 1299721 - 1299743 + GF 72 -4 -4.81685 | ATCTTTTCAGGATTA CAGGCTATGC CAT GAGCAGCCTG TTTTTCATGATTGCT TERM 1485 1299966 - 1299995 + GF 73 -2.9 -4.98255 | gap 1 AATCTTGGCAATGAC GTG-GCTTCGAAAA TGA TGTTCGAGGTGCAC TTTTTGTCGTTCAAA ftsX 1299213 - 1300094 + | FtsX HRM2_11480 1300058 - 1301245 + | putative metallopeptidase TERM 1486 1302389 - 1302377 - g 74 -4.7 -4.8543 | opp_overlap 1302377, overlap 1302385 CAAGGTGGAGAAAAA GGCTG AAA CCGCC TTTGACAGGATGATC ctpA2 1301247 - 1302617 + | CtpA2 TERM 1487 1303488 - 1303505 + G 74 -7.7 -4.1466 | gap 1 CAAAGGGATCCCTCT GCC-GGCA GTC TGCCAGGC TTTTGAGGATTCCCT TERM 1488 1303591 - 1303577 - g 84 -4.2 -5.23316 | GACTATATCAAAAAA CAGCTG GCC CAGTTG CTGGCGGTTGCCCAA HRM2_11500 1302689 - 1303738 + | hypothetical protein prmA2 1304654 - 1303743 - | PrmA2 TERM 1489 1304405 - 1304415 + g 100 -2.4 -6.30182 | CGTTAATCCCTTTAA GGGC ATC GGCC TTTTTTTTTATGTCG TERM 1490 1304770 - 1304748 - H 75 -9.1 -3.67597 | opp_overlap 1304766, overlap 1304761 1304764 TCGGTGAGTCAACAA CCCCTGAGC GAAAG ACCCAGGGG CTTGCAAGGCAACTT TERM 1491 1304991 - 1305007 + G 86 -2.9 -5.67063 | CGGCAACTGGTGTGA GGAGGGG TCA TCTTTCC TTTTTTTCTCGTCGG TERM 1492 1305331 - 1305358 + G 77 -12 -3.12351 | gap 1 ATAGGTACGGGAACG GGGCTTCTTGCCC TTG GGGC-AGCAGCCC TTGGGTGTGAGCAGG prmA3 1304869 - 1305720 + | PrmA3 HRM2_11530 1306525 - 1305824 - | hypothetical protein TERM 1493 1308142 - 1308156 + G 72 -3.5 -4.87665 | overlap 1308153 GCGGTTTTGCCCATG TGGCT TCCAT GGCCA TTTTTGTGGGTGGCA nupC 1307007 - 1308311 + | NupC HRM2_11550 1309711 - 1308386 - | radical SAM domain family protein TERM 1494 1309372 - 1309351 - G 76 -6.5 -4.52047 | opp_overlap 1309353, overlap 1309353 CACCATAGGAGAAAA GGGGCAGAA GGTT CTCTGCCTC TGGTGCGTCATAGGC TERM 1495 1309673 - 1309688 + g 73 -6.1 -4.48877 | opp_overlap 1309673 TACAGGTTCCAGGAA GACGG CAGTTT CCGTC TTTTCTCGGTGTTTC HRM2_11560 1310093 - 1309785 - | hypothetical protein TERM 1496 1310074 - 1310086 + g 73 -6.3 -4.57218 | opp_overlap 1310073 1310074, overlap 1310080 ATGAAGATTAAAATC GGTTT TTG AAACC TTTTCATTCTATTAT TERM 1497 1310563 - 1310589 + G 70 -8 -3.74519 | opp_overlap 1310562 1310561 1310582, overlap 1310582 ATTACAGCAACAATG GGTTCAAGCTTG AAT CAAGCCTGAAGC TTTCATCAGGATGTT HRM2_11570 1310328 - 1310639 + | HesB-like domain protein TERM 1498 1310814 - 1310801 - g 70 -8.1 -3.72576 | GTTGCTGGGACGAAA CCTGC AAGG GCAGG CAAACTGACCCGACA HRM2_11580 1310669 - 1311151 + | hypothetical protein hypC 1311281 - 1311517 + | HypC TERM 1499 1311576 - 1311592 + F 100 -7.9 -5.29846 | CCGGGGTTGTCCAGG GGGTCGG ATT TCGGCCC TTTTTATTTCAGCTT TERM 1500 1312429 - 1312400 - g 71 -5.6 -4.55887 | opp_overlap 1312414, overlap 1312396 CTTGAAAAATACAAA TGCACGGACCCG GGGGGG CGGCCCCTTGCA TCCGGTCTTGCCCCC hypF 1311635 - 1313836 + | HypF hypD 1313837 - 1314925 + | HypD TERM 1501 1315285 - 1315298 + G 80 -2.3 -5.40072 | TTCAACAGACTCCTA TGTGG TGGA CCCCA TTTTTTTCCCCGGGG TERM 1502 1315367 - 1315379 + G 87 -4.7 -5.42259 | GACATCGCCATGTGC GGGGC AAA GCCGC TTTTTTTGAGCGTGG TERM 1503 1315574 - 1315543 - g 70 -9.5 -3.22068 | gap 1, opp_overlap 1315539 1315545 CAAGATATTCATCAA CACC-TCGGGCATC GGGGT GATTCCCGACGGTG TAAATGTCTCCGGTC hypE 1315115 - 1316125 + | HypE HRM2_11630 1317166 - 1316171 - | hypothetical protein HRM2_11640 1318818 - 1317193 - | NAD-dependent aldehyde dehydrogenase TERM 1504 1317717 - 1317742 + g 91 -6.9 -5.08824 | TGTCGTTGACGATTC TGCCATAATCA GGGC TGGTAATGGCA TTTTTTCCGTAGCAA trxA1 1319124 - 1319570 + | TrxA1 HRM2_11660 1319896 - 1320759 + | hypothetical protein hyaD1 1321214 - 1320756 - | HyaD1 TERM 1505 1321273 - 1321249 - R 100 -20.1 -3.71649 | opp_overlap 1321249 GGGTTAAACGTGAAA GGGGGGATGGA ACG TCCATCCCCCC TTTGTCTTTTGCAGC TERM 1506 1321249 - 1321273 + r 100 -20.1 -4.45168 | opp_overlap 1321249 GGGTTAAACGTGAAA GGGGGGATGGA ACG TCCATCCCCCC TTTGTCTTTTGCAGC hysA 1322809 - 1321295 - | HysA TERM 1507 1321574 - 1321559 - G 70 -10.4 -2.92135 | overlap 1321558 GATATAATGAAGAAG GGCACC CCTG GGTGCC TCGGTGAGACCGATT TERM 1508 1322242 - 1322259 + g 71 -5.5 -4.56597 | opp_overlap 1322239 1322242 TACCGCCGACAACGA TGCCCTG GACA TGGGGCA TTTTTCCGCCAAGAA TERM 1509 1322264 - 1322295 + g 76 -4.4 -4.95155 | gap 1 GACATGGGGCATTTT TCCGCCAAGAAG-GG CGA CCATTTCATGGCAGA TTTTTCTGATCTCAA TERM 1510 1322712 - 1322757 + g 93 -3.9 -5.75342 | gap 1, overlap 1322717 ACCTCTACTTCAACT TTCAGGTGGCCTTCGATCCTGG TAA CCGGG-TCGATGGCAACTTTTA TTTTTTTTCCCGCAG TERM 1511 1322717 - 1322752 + g 100 -10.4 -5.66926 | gap 1, overlap 1322712 TACTTCAACTTTCAG GTGGCCTTCGATCCTGG TAA CCGGG-TCGATGGCAAC TTTTATTTTTTTTCC hysB 1323859 - 1322846 - | HysB TERM 1512 1324199 - 1324213 + H 100 -10 -4.46112 | opp_overlap 1324196 1324199 ACGGGAATTCAATCA CTGGTG TGG CACCAG TTTGTTTAGATGAAA TERM 1513 1324213 - 1324199 - H 72 -10 -2.78891 | opp_overlap 1324199, overlap 1324196 ACGGGAATTCAATCA CTGGTG TGG CACCAG TTTGTTTAGATGAAA hyaD2 1324293 - 1324784 + | HyaD2 TERM 1514 1326250 - 1326218 - g 74 -3.5 -5.02074 | gap 1 TGACCCGGGAAAAAA CCTGGCCTG-AAGA GATCAA TATTGCAGACCAGG ATCCAAAGGTTGGCG TERM 1515 1327361 - 1327345 - g 73 -5.7 -4.52857 | overlap 1327346 ACGCCTGAGACAAAA CCCCGGG TGA CCAGGAG TGGAGATGATCTGAT TERM 1516 1327632 - 1327611 - g 71 -10.9 -3.05274 | gap 1, overlap 1327608 CAAACCCATAAACGA GGCCATTGCC CAG GGCAA-GGCC GCTGCATCCAGGGCA hdrA1 1324885 - 1327935 + | HdrA1 TERM 1517 1328333 - 1328320 - g 80 -2.4 -5.42862 | AGATTTGCAAAAAAA GTGA CCGAGT TCAC CAATAAAATTAAGGA mvhD2 1327963 - 1328388 + | MvhD2 mvhG 1328388 - 1329329 + | MvhG TERM 1518 1329981 - 1330002 + G 73 -8.7 -3.73402 | TTGACCTTGTCACCA CCCTTGGTA CCAT TACCACGGG TTTCATCGGCACTGT mvhA 1329332 - 1330681 + | MvhA TERM 1519 1330806 - 1330785 - T 100 -15.9 -5.71712 | overlap 1330802 GCTGATAGAAAAAAA GGCCCTGGA GCAA TCCAGGGCC TTAGGGGCTCAGATA TERM 1520 1330912 - 1330867 - T 83 -11.3 -3.05816 | opp_overlap 1330878, overlap 1330878 TCAGCTCGTATTCAA GGCGTATCAAAGGGAACATAT TGAA ATATGTGCCCTTTGATGCAAC GCAGAAGACGAACTG TERM 1521 1330901 - 1330878 - T 75 -8.2 -3.74747 | opp_overlap 1330878, overlap 1330867 TCAAGGCGTATCAAA GGGAACATAT TGAA ATATGTGCCC TTTGATGCAACGCAG TERM 1522 1330878 - 1330901 + T 73 -8.2 -3.72576 | opp_overlap 1330878 1330867 TCAAGGCGTATCAAA GGGAACATAT TGAA ATATGTGCCC TTTGATGCAACGCAG TERM 1523 1331115 - 1331080 - T 83 -12 -2.72463 | opp_overlap 1331074, overlap 1331091 AGCGATTCGTAACCA TTTGGCGGAAATACCA GTAC TGGCATTCCCGTCAAA TGCAGATTTATCCTA HRM2_11750 1332911 - 1331589 - | two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein) TERM 1524 1332234 - 1332258 + g 90 -8.7 -4.60924 | CGTTTCAAATGTTTT TTTCGTGTCAG TTC CTGATATGAAA TTTTTGAAAGATTTA TERM 1525 1332434 - 1332422 - G 76 -3.3 -5.20333 | GACCCACAATAAAAA CTGGC ATG GACAG ACTTTCAAAAATAGT TERM 1526 1332670 - 1332640 - G 72 -9.8 -3.484 | overlap 1332642 CGTATTAGATCAGAA TAGGACTGACGATA ATA TTTCATCAGTCCCA AAAACATGTCTATAC TERM 1527 1332668 - 1332642 - G 73 -10.2 -3.31365 | overlap 1332640 TATTAGATCAGAATA GGACTGACGATA ATA TTTCATCAGTCC CAAAAACATGTCTAT TERM 1528 1333391 - 1333411 + H 80 -2.5 -5.5208 | overlap 1333393 1333406 GAAAAGGGTTGGCTA TAGACAGAA GTA TGCTGTCAA TTTTTTATATTATAA TERM 1529 1333406 - 1333434 + H 100 -6.9 -6.23545 | overlap 1333393 1333391 TAGACAGAAGTATGC TGTCAATTTTTTA TAT TATAAAGTTGACA TTTTTTTTCTTTAAA TERM 1530 1333592 - 1333581 - H 71 -2.2 -5.14563 | CGCGGCATCAAAAAA CCGA AATC TCGA AAATATTATTTTTGT HRM2_11760 1333997 - 1334755 + | hypothetical protein TERM 1531 1335057 - 1335041 - f 71 -4.5 -4.70583 | opp_overlap 1335041, overlap 1335034 TGTATTAAGATAAAA GCAATTT ACA AAATTAC GTTCATCTGATATTC HRM2_11770 1335112 - 1336107 + | hypothetical protein HRM2_11780 1336908 - 1337078 + | hypothetical protein HRM2_11790 1337331 - 1337570 + | hypothetical protein TERM 1532 1338313 - 1338341 + G 82 -8 -4.50193 | gap 1 TGCGCTATGGTATTC GGCAGTGCCCGGG GTGA CCCTGGC-CGGCC TTTTCCTTGCTTCAT HRM2_11800 1337594 - 1338595 + | hypothetical protein TERM 1533 1339749 - 1339739 - g 74 -4.6 -4.85177 | opp_overlap 1339739 AAACCAGATCAAAAA GAGC CAG GCCC GTGTTGTTGCGGCAA HRM2_11810 1338915 - 1340306 + | putative response regulator protein HRM2_11820 1340623 - 1341312 + | sensory histidine kinase TERM 1534 1342257 - 1342279 + G 70 -4.8 -4.67982 | opp_overlap 1342257, overlap 1342259 CCTTGATCCAGACCA GCTTGAACAG GTG CTGGTCAATC TTTTGTTCAATGCCG HRM2_11830 1341364 - 1342590 + | putative response regulator protein HRM2_11840 1342604 - 1342990 + | sigma-54 dependent DNA-binding response regulator hdrA2 1343010 - 1346063 + | HdrA2 TERM 1535 1346171 - 1346159 - g 100 -3.3 -6.02914 | overlap 1346160 TTCATATAAAAAAAA CCGCA GGA TTCGG CGATTCGCTTTTTTG TERM 1536 1346621 - 1346643 + G 71 -10.6 -3.14132 | opp_overlap 1346618 1346614 AAAAATAAGGCACCT TGGACCCAAT CCC ATTGGGGCCA TTGGTAACGAGACAG mvhD3 1346136 - 1346690 + | MvhD3 TERM 1537 1346722 - 1346738 + G 73 -3 -4.91511 | overlap 1346724 AAAACAGTGGATATC TTTCTG GGTTA CAGAGA TTTTTGTGGTCACCT fdhB3 1346668 - 1347480 + | FdhB3 TERM 1538 1349129 - 1349113 - g 74 -6.5 -4.38712 | CCTACCTGCATAAAA CCACCTT TGC AAGGGGG CTGGGTAAGTTCCAT fdhA3 1347498 - 1349543 + | FdhA3 TERM 1539 1349548 - 1349588 + F 100 -17 -4.08394 | overlap 1349550 TTCTCGCCTGATCCG TGCTCCCAGGGGGCAGAT ATTAA ATCTGTTCCCTGGGGGTA TTTTCACAAAGATCT TERM 1540 1349550 - 1349586 + F 100 -17.4 -3.63922 | overlap 1349548 CTCGCCTGATCCGTG CTCCCAGGGGGCAGAT ATTAA ATCTGTTCCCTGGGGG TATTTTCACAAAGAT TERM 1541 1350273 - 1350297 + G 74 -7.3 -4.18164 | CTATAAAAACCGGTG TATCCATTTTT CCT GAAGATGGATA TTCTTTTCAAGAATT HRM2_11890 1349711 - 1351576 + | putative signal transduction protein (HD domain protein) HRM2_11900 1351592 - 1352842 + | adenylate cyclase family protein HRM2_11910 1352882 - 1353928 + | metal dependent phosphohydrolase (HD domain protein) TERM 1542 1353990 - 1353969 - f 89 -10.3 -3.95424 | ATCAGGAATATGAAA CCTAAAAGT TGCA ACTTTTAGG TGAAATAAAAAAGGG gloB 1354017 - 1354718 + | GloB HRM2_11930 1355639 - 1354785 - | hypothetical protein TERM 1543 1355057 - 1355079 + g 100 -10.6 -4.73614 | opp_overlap 1355063 TGAGGTTCCCATCCC CAGCAAGATC CGG GATCTGGCTG TTTGTTTTGATCATG TERM 1544 1355409 - 1355454 + g 82 -10.7 -3.8186 | gap 1 AAAGCGGTTTCTGAG TATCCTGAGCATTTTCAAGGGC TTT GCCCTTGGAAATA-TGAGGATA TTATTGATTCGGGTG TERM 1545 1355773 - 1355762 - H 73 -5.8 -4.4784 | GAAATGTTAAACAAA CCCA ACCA TGGG GGGAGAGTGAAAAAT TERM 1546 1356010 - 1355989 - g 80 -2.9 -5.33848 | overlap 1355990 ATTACAAGGAAAAAA CGGTCAAGA CCTC CCTTGCCCA GGAGATTGAAACGTC HRM2_11940 1355814 - 1356122 + | hypothetical protein acsM2 1357892 - 1356213 - | AcsM2 TERM 1547 1356850 - 1356863 + g 70 -2.4 -5.04385 | opp_overlap 1356850 TATCCTTCAAAAATA GAGA GTCCGG TCTC TTTTTTCCAGGTATG HRM2_11960 1358439 - 1357879 - | transcriptional regulator (XRE-family protein) tatD2 1359234 - 1358530 - | TatD2 TERM 1548 1358889 - 1358868 - G 76 -12.3 -2.91645 | gap 1, opp_overlap 1358865 1358864, overlap 1358865 AATAAGAATGAATGA GCCCCCCATG GGA CA-GGGGGGC TGCGCTTTTAAGGAT gpsA2 1360339 - 1359305 - | GpsA2 TERM 1549 1360087 - 1360098 + g 73 -3 -4.92757 | TGTGGGAGGGTACGA CAAT GAGG ATTG TTTTGTTGTTACTGA HRM2_11990 1361983 - 1360796 - | hypothetical protein TERM 1550 1361852 - 1361865 + g 76 -8.1 -4.18401 | opp_overlap 1361834, overlap 1361844 1361860 CTCCGTTCCCCGGAT CAGCC CGTG GGCTG TTTTGGCATCTATGG TERM 1551 1361916 - 1361926 + g 71 -6.8 -4.16605 | AGAATAACGGCAGAT CCCA TCA TGGG TTGCTTTTTTTTGTC HRM2_12000 1363047 - 1361983 - | chloromuconate cycloisomerase-like protein TERM 1552 1362356 - 1362371 + g 81 -6.1 -5.04987 | opp_overlap 1362342 1362343 ACCCGCCGGATGGCC TGGGG AAGCTG CCCCA TTTTTTCGAGATGTT HRM2_12010 1363549 - 1363058 - | HTH-type transcriptional regulator (Lrp-AsnC family protein) TERM 1553 1363608 - 1363596 - R 84 -3.5 -5.50499 | opp_overlap 1363596 TTACATCTAAAAAAA TTATA TTA TATAA ATTATCATGTCAATT HRM2_12020 1365248 - 1363929 - | putative N-acetylmuramoyl-L-alanine amidase AmpD TERM 1554 1364326 - 1364350 + g 91 -4.9 -5.61596 | opp_overlap 1364316, overlap 1364320 1364328 AGCAACACACGGGTG TGGGCTGGTAT GCG GTCCCAGCCGA TTTTTTTCTCCACCT HRM2_12030 1365785 - 1365339 - | hypothetical protein HRM2_12040 1366416 - 1366087 - | hypothetical protein TERM 1555 1366374 - 1366394 + g 73 -3.3 -5.00616 | CTATTGGAGACTTAT GTAAATGTC GTT GATATTTTC TTTTTTCCGGGAAAG HRM2_12050 1367063 - 1366596 - | hypothetical protein TERM 1556 1366740 - 1366750 + g 74 -4 -5.01732 | opp_overlap 1366740 1366747 ATTATCAAGTATGAA TTCA ACA TGAA TTTTTTCACCCACTT HRM2_12060 1368346 - 1367444 - | putative permease of the drug/metabolite transporter (DMT) superfamily HRM2_12070 1369769 - 1368375 - | sigma-54 dependent DNA-binding response regulator (Fis family protein) atoS1 1371286 - 1369766 - | AtoS1 TERM 1557 1370392 - 1370408 + g 79 -7.3 -4.49556 | opp_overlap 1370395 GGGTATAGCCGAGGA TAATCCC AAG GGGATTG TTTATTTCATGGGCC HRM2_12090 1371747 - 1371283 - | hypothetical protein HRM2_12100 1372310 - 1371753 - | hypothetical protein TERM 1558 1372358 - 1372390 + r 100 -12.8 -3.7791 | gap 1, opp_overlap 1372356 1372359 1372361 1372363, overlap 1372359 1372361 CAGATGGTTAAAATC AGACAGGGG-GTTGC CACT GCAACGCCCCTGTCA TTTGCTGCCTGGTTA TERM 1559 1372359 - 1372389 + r 100 -16.3 -2.86264 | gap 1, opp_overlap 1372356 1372359 1372361 1372363, overlap 1372358 1372361 AGATGGTTAAAATCA GACAGGGG-GTTGC CACT GCAACGCCCCTGTC ATTTGCTGCCTGGTT TERM 1560 1372389 - 1372359 - R 100 -16.3 -3.09272 | gap 1, opp_overlap 1372359 1372358 1372361, overlap 1372356 1372361 1372363 AGATGGTTAAAATCA GACAGGGG-GTTGC CACT GCAACGCCCCTGTC ATTTGCTGCCTGGTT TERM 1561 1372387 - 1372361 - R 95 -13.1 -3.10091 | gap 1, opp_overlap 1372359 1372358 1372361, overlap 1372359 1372356 1372363 ATGGTTAAAATCAGA CAGGGG-GTTGC CACT GCAACGCCCCTG TCATTTGCTGCCTGG TERM 1562 1372361 - 1372387 + r 95 -13.1 -2.97667 | gap 1, opp_overlap 1372361 1372359 1372356 1372363, overlap 1372359 1372358 ATGGTTAAAATCAGA CAGGGG-GTTGC CACT GCAACGCCCCTG TCATTTGCTGCCTGG TERM 1563 1372384 - 1372363 - R 74 -10.1 -3.10533 | opp_overlap 1372361 1372359 1372358, overlap 1372361 1372359 1372356 GGTTAAAATCAGACA GGGGGTTGC CACT GCAACGCCC CTGTCATTTGCTGCC HRM2_12110 1374128 - 1372425 - | hypothetical protein TERM 1564 1374041 - 1374091 + g 70 -9.7 -3.31461 | opp_overlap 1374041 1374042, overlap 1374035 1374042 AACTTGATGCGGAAA GGGTTCCCGTGTTTTGGGCCAGG GCGGG CATGGCACAAAACAGGAGAACCA TTGTAAAAGTAGATA TERM 1565 1374091 - 1374041 - G 82 -11.9 -3.5764 | opp_overlap 1374035 1374041 1374042, overlap 1374042 AACTTGATGCGGAAA GGGTTCCCGTGTTTTGGGCCAGG GCGGG CATGGCACAAAACAGGAGAACCA TTGTAAAAGTAGATA TERM 1566 1374090 - 1374042 - G 84 -15.4 -2.74263 | opp_overlap 1374035 1374042 1374041, overlap 1374041 ACTTGATGCGGAAAG GGTTCCCGTGTTTTGGGCCAGG GCGGG CATGGCACAAAACAGGAGAACC ATTGTAAAAGTAGAT TERM 1567 1374042 - 1374090 + g 78 -13.2 -2.58663 | opp_overlap 1374041 1374042, overlap 1374035 1374041 ACTTGATGCGGAAAG GGTTCCCGTGTTTTGGGCCAGG GCGGG CATGGCACAAAACAGGAGAACC ATTGTAAAAGTAGAT TERM 1568 1375328 - 1375301 - g 95 -2 -6.09196 | gap 1, opp_overlap 1375306 1375313, overlap 1375302 1375304 1375305 1375313 GTTAAAACAAAAAAA CGATTGGCTAAAG AGC CTTTAGCCTTT-G CTACAGCTCCTTTGC TERM 1569 1375306 - 1375324 + G 85 -11.8 -3.73953 | opp_overlap 1375305 1375304 1375301 1375302 1375313, overlap 1375313 AACAAAAAAACGATT GGCTAAAG AGC CTTTAGCC TTTGCTACAGCTCCT HRM2_12120 1374863 - 1375741 + | hypothetical protein TERM 1570 1375882 - 1375908 + T 71 -6.6 -4.18018 | GTACCACCAACATAG TCAGTGTTTGAG CCA TTCAAGCACGGA TTTTCGGTCAGCCGC TERM 1571 1375910 - 1375944 + T 91 -12.9 -2.69799 | opp_overlap 1375931, overlap 1375908 CATTCAAGCACGGAT TTTCGGTCAGCCGCT AAATA ACCGGCTGGCCGAAG TAGTCTCTGCCCTGG TERM 1572 1376071 - 1376021 - T 100 -6.4 -6.10295 | gap 1, opp_overlap 1376023 1376024, overlap 1376022 1376024 TTAATACAAAAAAAA CGA-GGCAGGTTTTGTCTGAT GGATTCTTTT ATCAGATAAAACCTGCCCTTG TCTTGCCCGAAACTG TERM 1573 1376068 - 1376022 - T 83 -9 -4.23737 | gap 1, opp_overlap 1376023 1376024, overlap 1376021 1376024 TAATACAAAAAAAAC GAGGCAGGTTTTGTCTGAT GGATTCTTTT ATCAGATAAAACCTGCC-C TTGTCTTGCCCGAAA TERM 1574 1376023 - 1376068 + T 100 -15.7 -3.65812 | opp_overlap 1376022 1376021 1376024, overlap 1376024 AATACAAAAAAAACG AGGCAGGTTTTGTCTGATGGA TTCT TTTATCAGATAAAACCTGCCC TTGTCTTGCCCGAAA TERM 1575 1376024 - 1376067 + T 100 -19.2 -2.79273 | opp_overlap 1376022 1376021 1376024, overlap 1376023 ATACAAAAAAAACGA GGCAGGTTTTGTCTGATGGA TTCT TTTATCAGATAAAACCTGCC CTTGTCTTGCCCGAA TERM 1576 1376067 - 1376024 - T 100 -12.7 -3.66961 | opp_overlap 1376024 1376023, overlap 1376022 1376021 ATACAAAAAAAACGA GGCAGGTTTTGTCTGAT GGATTCTTTT ATCAGATAAAACCTGCC CTTGTCTTGCCCGAA HRM2_12130 1376993 - 1376133 - | ABC-type Mn2+/Zn2+ transport system, permease component HRM2_12140 1377753 - 1376986 - | ABC-type Mn2+/Zn2+ transport system, ATPase component HRM2_12150 1378946 - 1377840 - | peptidase family protein (putative zinc metallopeptidase) TERM 1577 1378026 - 1378008 - G 70 -4.5 -4.68424 | opp_overlap 1378008, overlap 1378010 TAAGTCACCTAAAAA CCGTGCA TCGCT TGCACCG TGTTCGTTGCCCGTG leuA1 1380117 - 1379008 - | LeuA1 TERM 1578 1380470 - 1380497 + H 100 -12.8 -5.67283 | opp_overlap 1380468, overlap 1380489 AGAAGAAAAGGGATA CCCTGAATCGAT ATTC ATCGGTTCGGGG TTTTTTGTTTGCCTT HRM2_12170 1380553 - 1380855 + | hypothetical protein TERM 1579 1380947 - 1380933 - T 70 -5.6 -4.38712 | overlap 1380935 TCCATGGGGACAAAA CGCCTG TAT CAGGGG GTGATGGGGCCGGGA HRM2_12180 1382407 - 1380941 - | hypothetical protein TERM 1580 1380970 - 1380986 + g 79 -5.1 -5.0538 | overlap 1380953 1380957 GGCCGGGACGAACGG TCTCTGT TTC ACAGCGA TTTTTTCCGCTGGCC TERM 1581 1381819 - 1381804 - G 91 -3.2 -5.75342 | opp_overlap 1381804 1381805, overlap 1381805 TGTCCGTAAAAAAAA TGGTAC GATT GTACCG TTCCTGGTAGGTGTT dctP3 1382609 - 1383661 + | DctP3 dctQ3 1383645 - 1384172 + | DctQ3 TERM 1582 1384916 - 1384944 + G 86 -3 -5.56112 | overlap 1384917 TATTTCGGGCTGTTT ACCCCCACTG AGGCCGGTG CTGTGGGGGC TTTTTTCCTTTTTGT dctM3 1384184 - 1385488 + | DctM3 HRM2_12220 1386579 - 1385515 - | putative Mg2+ and Co2+ transporter (CBS domain protein) HRM2_12230 1387284 - 1386583 - | ABC-type arginine/histidine transport system, permease component HRM2_12240 1387979 - 1387287 - | ABC-type arginine/histidine transport system, permease component TERM 1583 1388001 - 1388040 + r 75 -5.6 -4.63172 | opp_overlap 1388007 1388015 GGTATCCTAAAGATT CTAAAACCGGAAAATCGG CTGG CCGATCTCCCGGTTACGG TTTTATGGTTTAGTC TERM 1584 1388034 - 1388007 - R 100 -14.2 -4.21827 | opp_overlap 1388001, overlap 1388015 CTAAAGATTCTAAAA CCGGAAAATCGG CTGG CCGATCTCCCGG TTACGGTTTTATGGT TERM 1585 1388026 - 1388015 - R 70 -5.8 -4.28049 | opp_overlap 1388001, overlap 1388007 TCTAAAACCGGAAAA TCGG CTGG CCGA TCTCCCGGTTACGGT HRM2_12250 1388829 - 1388050 - | ABC-type histidine transport system, periplasmic histidine-binding protein (HBP) precursor hisP 1389654 - 1388878 - | HisP TERM 1586 1389242 - 1389206 - G 71 -6.5 -4.18197 | opp_overlap 1389216, overlap 1389209 AGCTGGGAGGGAAAA TAGTGGGAACGTTCGGC AAT GCCGACCTTTTCCAGTA GGGCCATGGCCGTTT TERM 1587 1389216 - 1389232 + g 74 -7.9 -4.13767 | opp_overlap 1389209 1389206 GAAAATAGTGGGAAC GTTCGGC AAT GCCGACC TTTTCCAGTAGGGCC ispG 1389824 - 1390984 + | IspG TERM 1588 1390985 - 1390975 - f 70 -2.6 -4.93454 | opp_overlap 1390975 CAAAGAAATAGAAAA TTTA AAA TAAA TTCTGGAGGAAGATA TERM 1589 1391668 - 1391642 - g 93 -8 -5.08601 | opp_overlap 1391624 1391642 TCAGGGGAAGAAAAA CTGCCTCTGAAA GAT TTCCAGGAGCAG TTGATACGGTGTGTA TERM 1590 1391720 - 1391710 - g 84 -4.6 -5.31877 | ATGCAGGATAAAAAA GCCC TCC AGGC TGGAACTTCCCATTT TERM 1591 1392091 - 1392081 - g 70 -4.6 -4.7373 | GGATTGGATCAAAAA GGGA ATC CCCC TGAGGGCTGAGATCG proS 1391002 - 1392516 + | ProS TERM 1592 1393743 - 1393731 - g 79 -7.7 -4.55128 | opp_overlap 1393741 ATGGGGAAATCAAAA CCCTT CCC AAGGG GGCAACCCCGGTTGA TERM 1593 1394045 - 1394026 - g 73 -5.6 -4.7373 | opp_overlap 1394026 GCAGTTCAGGAAAAA GGGCCACA GCTT TGCTGCCC TTGTCAAGTCCGGGG TERM 1594 1394468 - 1394496 + G 70 -10.3 -2.90194 | TTGATCAGGGTGCGC TCCACCGACAGAT TTG GTCTGTTGGCGGA TGTGGTTGCCGCCAT relA 1392536 - 1394686 + | RelA rpmB 1394907 - 1394683 - | RpmB TERM 1595 1394808 - 1394828 + g 73 -5.5 -4.68705 | GGGCCTTTACCCGCT GAAGGTT GGGGTTG AACCTTC TTTTGTTAACATTGT TERM 1596 1394863 - 1394874 + g 80 -2.2 -5.42862 | overlap 1394856 ATGGCTGACATTGTT TCCA ACCA TGGG TTTTTTTCCGCATAT HRM2_12310 1395674 - 1395069 - | putative DNA uptake lipoprotein trxB 1396684 - 1395755 - | TrxB TERM 1597 1396563 - 1396589 + g 88 -14.6 -3.39895 | opp_overlap 1396552, overlap 1396550 ATGACCTGGCCACCT GGTGCTGCTTTT TCC AAAAGTAGCACC TTCATTCGTGCCCGG trxA2 1397040 - 1396720 - | TrxA2 purN 1397190 - 1397909 + | PurN traB 1399099 - 1397915 - | TraB TERM 1598 1398785 - 1398796 + g 70 -3 -4.87786 | CATCTCCTGGCCGGG TTTG ATTT CAAA TTTTTCTGCAATTCG HRM2_12360 1399220 - 1399414 + | predicted pheromone shutdown protein TraB polA 1402097 - 1399422 - | PolA TERM 1599 1401941 - 1401930 - G 80 -4.4 -5.21709 | CTTCACATCAAAAAA TACG GCCA CGTA TTCAGGCTGTTTCTC TERM 1600 1402535 - 1402545 + G 76 -6.8 -4.57073 | AAAAAATGTTGATGA GGGT GTC ACCC TTTTTCAAGCAGGTG HRM2_12380 1402443 - 1402862 + | cAMP-binding protein (catabolite gene activator) TERM 1601 1402915 - 1402949 + T 100 -11.4 -5.58051 | overlap 1402918 1402919 AGTGTCATCTGCCGG AATTGGGGGACGTTTC AAT GGAACGTCCCCCGTTG TTTTATTTTTTCTTT TERM 1602 1402918 - 1402946 + T 100 -17.5 -4.75934 | overlap 1402915 1402919 GTCATCTGCCGGAAT TGGGGGACGTTTC AAT GGAACGTCCCCCG TTGTTTTATTTTTTC TERM 1603 1402919 - 1402945 + T 100 -18.8 -3.419 | overlap 1402918 1402915 TCATCTGCCGGAATT GGGGGACGTTTC AAT GGAACGTCCCCC GTTGTTTTATTTTTT rpsA1 1404412 - 1402952 - | RpsA1 TERM 1604 1403514 - 1403490 - G 74 -12.1 -2.75562 | opp_overlap 1403490, overlap 1403481 1403489 1403506 ACAAAGGCGCCAAAG GGGGCAAGGCG AAC CACCTTGCCCG TGAGTTGATCCCCCG TERM 1605 1403979 - 1403991 + g 76 -6.2 -4.63527 | TCCATCTGGCTTACC GGGC AGAAG GCCC TTTTTCCCATGATGG gap2 1405721 - 1404474 - | Gap2 HRM2_12410 1409906 - 1405731 - | putative pyruvate phosphate dikinase TERM 1606 1409071 - 1409092 + g 91 -5.1 -5.42862 | gap 1, overlap 1409073 CGTTTGCTCGTTATC TC-GTCGGGC ATG GTCCGGCTGA TTTTTTTGGGCATCT TERM 1607 1410026 - 1410010 - R 72 -6.5 -4.33182 | overlap 1410007 1410012 GCATTTATAAAATAA TACCCCT GAT AGGGGTT AAAATTAAACTTGCC TERM 1608 1410024 - 1410012 - R 78 -9.1 -3.76183 | overlap 1410010 1410007 ATTTATAAAATAATA CCCCT GAT AGGGG TTAAAATTAAACTTG HRM2_12420 1411095 - 1410031 - | putative acyl CoA dehydrogenase TERM 1609 1410629 - 1410644 + g 73 -3.2 -5.03314 | overlap 1410619 AGGTCTGCCAGGGGG GCGTTG GTGA CAAAGC TTTTTTCCCCGTCAA HRM2_12430 1412472 - 1411099 - | hypothetical protein HRM2_12440 1413383 - 1412475 - | hypothetical protein ltaE 1414405 - 1413401 - | LtaE TERM 1610 1413729 - 1413689 - G 85 -11.7 -3.66178 | overlap 1413692 GTTCTCAAGGGCAAA GATGCAGGCGGCAGCCAGG ATG CCTGCCTGGCGCATGCCCC CGCCGACCATTTTAC TERM 1611 1413726 - 1413692 - G 81 -14.2 -2.64412 | overlap 1413689 CTCAAGGGCAAAGAT GCAGGCGGCAGCCAGG ATG CCTGCCTGGCGCATGC CCCCGCCGACCATTT putA1 1415337 - 1414426 - | PutA1 lldD 1416356 - 1415331 - | LldD TERM 1612 1415383 - 1415357 - G 71 -10.8 -3.05384 | opp_overlap 1415351 1415350 CCTCCTGGGAGTTAA GTATGGCCGGGG TTG CCTTGGCCATAC TGGCGGTTCCTGTGA TERM 1613 1415787 - 1415806 + g 70 -2.8 -4.84359 | GGCATCAAGGGTTTT TGGGGC CACGGGCC GTCCCA TTTTTCTAAGCGTGA TERM 1614 1415935 - 1415925 - G 72 -8.2 -3.86346 | opp_overlap 1415925, overlap 1415926 CCAGGGTTTGATAAA GGGG ATG CCCC TTCCCTGGGCCTGTC HRM2_12480 1417434 - 1416418 - | Zn-dependet alcohol dehydrogenase TERM 1615 1416763 - 1416775 + g 77 -10.5 -3.54129 | GGTGTCAATGGCGCC GGCCC ATT GGGCC TTTAAAAGGGGTCTG HRM2_12490 1417725 - 1418408 + | hypothetical protein TERM 1616 1418938 - 1418949 + G 74 -7.2 -4.13282 | overlap 1418917 GCGCTTTCCCCGGCA GGCG TCAC CGCC TTTTCAGGATGTAAT TERM 1617 1419661 - 1419697 + G 77 -10.2 -3.5525 | gap 1, opp_overlap 1419660 1419663, overlap 1419664 CCCGGGGGAGGAGAC CACTTCCCCTGAGCGCT GGGA AGGGCTC-GGGGAAATG TTTAAAACCATCTAT TERM 1618 1420989 - 1421005 + G 71 -7.9 -4.07885 | ACCATGGGATCATGG CCGGCTG TTC CAACCGG TTTTACGGCAGGGTG HRM2_12500 1418411 - 1421251 + | ATPase-like protein HRM2_12510 1421731 - 1421261 - | hypothetical protein HRM2_12520 1422994 - 1422062 - | transposase for insertion sequence 801 (transposase 32 family protein) TERM 1619 1422305 - 1422321 + g 81 -5.7 -5.06052 | overlap 1422306 ATAAAGAAATTTTTC TCCGGTC ACG GTCCGGG TTTTGTATTTTTTAG TERM 1620 1422445 - 1422461 + g 70 -4.3 -4.62069 | overlap 1422446 GATAGATGATGGCCT TGTCGCC GTT GCCGACG TTTTTGCAATGAACA hmrR2 1423293 - 1423123 - | HmrR2 xerD2 1424036 - 1423275 - | XerD2 TERM 1621 1424069 - 1424089 + H 76 -7.6 -4.18401 | gap 1 AAGTAACTGGTCAAT GGCGGATGC GTTG GCATC-GCC TTTTCCGGTATATCA TERM 1622 1424543 - 1424531 - H 100 -10.5 -4.3739 | opp_overlap 1424530, overlap 1424532 GAGTTTCTTATAAAA CCGGC GTG GCCGG AGCGAGGGATGGCTT TERM 1623 1424570 - 1424532 - H 84 -11.7 -3.22113 | gap 1, opp_overlap 1424530, overlap 1424531 AGTTTCTTATAAAAC CGGCGTGGCCGG-AGCGA GGGA TGGCTTCCGGCCACAACG AATATTGAAACTCTG HRM2_12550 1424925 - 1425182 + | hypothetical protein HRM2_12560 1425961 - 1425164 - | sensory box histidine kinase / response regulator TERM 1624 1426484 - 1426500 + G 74 -4.3 -4.86033 | CGGCATATGCTCTAC GGAGCCA CCA TGGTGCC TTTTTATAAAAATTT azlC 1426244 - 1426945 + | AzlC HRM2_12580 1426938 - 1427285 + | hypothetical protein HRM2_12590 1428849 - 1427290 - | hypothetical protein TERM 1625 1428793 - 1428810 + g 70 -4.7 -4.6856 | opp_overlap 1428784 1428782 AACATATCCGGTGGC CCCGGTC ACAA GGACGGG TTTTTGCACTGTTTG TERM 1626 1429024 - 1429042 + G 70 -3 -4.82756 | overlap 1429025 GCCACGATCCCTTGT TGCTTCAG ACC CTGGGGCC TTTTGTTGATTATGT HRM2_12600 1428936 - 1429460 + | hypothetical protein HRM2_12610 1430487 - 1429510 - | hypothetical protein TERM 1627 1430736 - 1430748 + H 70 -7.7 -3.60098 | opp_overlap 1430735 GGTCCACCATAAATG TCTGC CAG GCAGA TTTGGGCTAAAAAAT mraZ 1430953 - 1431393 + | MraZ mraW 1431424 - 1432362 + | MraW HRM2_12640 1432367 - 1432687 + | hypothetical protein TERM 1628 1432705 - 1432693 - f 74 -10.5 -2.62043 | overlap 1432689 CCCACAATGAACTCA CCGGC CTG GCCGG AGCAGGGTATCGGCC TERM 1629 1433882 - 1433898 + G 74 -10.1 -3.60971 | opp_overlap 1433882 AACAACAGGTGAACA GGCCCTT TAC GAGGGCC TTTCCGGATTCGGGT TERM 1630 1433940 - 1433956 + G 91 -11.5 -4.16837 | ACAGGTGTATCGTCT CCGGGGG AAA CCCCTGG TTCTTTGTCCTTCTA TERM 1631 1434339 - 1434326 - g 86 -8.1 -4.62069 | opp_overlap 1434324 1434326 GGGCTACGCCAAAAA CCGCT ATAC AGCGG TATTTGCAGGGTTTG ftsI 1432806 - 1434551 + | FtsI murE 1434555 - 1436099 + | MurE TERM 1632 1436343 - 1436353 + G 87 -4.6 -5.47218 | TTCCCAAGGATGTCC CGGG CTG CCTG TTTTTTTCCGTGGAC murF 1436096 - 1437556 + | MurF mraY 1437560 - 1438639 + | MraY murD 1438650 - 1440026 + | MurD ftsW 1440023 - 1441147 + | FtsW TERM 1633 1441895 - 1441932 + G 75 -9.2 -3.90744 | gap 1, overlap 1441899 GGCCAGGGCCTTTTT TGACGATCTTCCCCAGC GCATG GCTGGGGCCGATC-TCA TTGTTTCAAGGGCCG TERM 1634 1441899 - 1441929 + G 73 -11.1 -3.02371 | overlap 1441895 AGGGCCTTTTTTGAC GATCTTCCCCAGC GCATG GCTGGGGCCGATC TCATTGTTTCAAGGG murG1 1441140 - 1442249 + | MurG1 TERM 1635 1442797 - 1442809 + G 72 -4.1 -4.84761 | TTACCAACATCGACC TTGAG CAC CTCGA TTTTTATAAGGATAT murC 1442250 - 1443620 + | MurC TERM 1636 1444315 - 1444326 + G 70 -2.2 -5.00616 | ACCCGGGTCAATGGC CAGT GCAG GCTG TTTTTTCAAGAACCC murB 1443629 - 1444561 + | MurB TERM 1637 1445317 - 1445301 - g 72 -3.7 -4.8622 | GGGTTTAAGGAAAAA TTTGCAG GGA CTTCAAA GATTCTCGATTACAT ftsQ 1444626 - 1445438 + | FtsQ ftsA 1445451 - 1446674 + | FtsA TERM 1638 1447135 - 1447120 - g 76 -4.6 -5.0538 | TTTGAGGGTAAAAAA CGGGCT GCCC AGGCCG AAGATGGCATCAATC ftsZ 1446694 - 1447911 + | FtsZ TERM 1639 1447935 - 1447925 - g 73 -5.4 -4.65838 | GATATATGGCAAAAA GTGT CAG ACAC GGCAGAAAAGAGGGT TERM 1640 1448274 - 1448313 + G 82 -7.3 -4.68593 | opp_overlap 1448279 1448280, overlap 1448279 TGGGGCCGGCCGGAA TGAAAGCCAC-CCTCTTGT GGTC GCAGGGGGAGTGGC-TTCA TTTTTGAATCCTGAG TERM 1641 1448279 - 1448309 + G 72 -8.3 -3.83042 | gap 1, opp_overlap 1448279 1448280, overlap 1448274 CCGGCCGGAATGAAA GCCAC-CCTCTTGT GGTC GCAGGGGGAGTGGC TTCATTTTTGAATCC TERM 1642 1448564 - 1448527 - g 76 -6.1 -4.66163 | gap 1, overlap 1448532 ATCGGTATGGAAAAA CGCAATGACCAGGCCCCG GAT CGGGTGCGGGTCAG-GCG TGTCACTACCCTCAA TERM 1643 1448675 - 1448687 + G 71 -5.5 -4.52589 | overlap 1448664 1448676 CACATGGCTGCAGGT TCTGC AGT GCAGG TTTTATCTACCGGCC HRM2_12770 1447915 - 1449621 + | radical SAM domain protein TERM 1644 1450035 - 1450046 + G 71 -5.8 -4.30978 | GCCTTGATCAACATC CCCA CCCT TGGG TTTTCCTCCCTTAAC TERM 1645 1450160 - 1450143 - g 100 -6.9 -5.24129 | CCCCTGGAGAAAAAA CAGGTGG TCCC CCGCCTG GCAACGGTCAGTGAG TERM 1646 1450232 - 1450246 + G 78 -10 -3.91897 | GATCGGGTATGTCAA TCCGGA AAA TCCGGA TTTCTGGCTCAACCG trmH1 1449708 - 1450388 + | TrmH1 TERM 1647 1450577 - 1450549 - T 100 -20.5 -3.56092 | opp_overlap 1450537 1450549 GCACCATTTTTTAAA GGGGTTTACAGCT TTT AGCTGTAAACCCC TTTTCTTTTGGCCAA TERM 1648 1450549 - 1450577 + T 100 -20.5 -5.07652 | opp_overlap 1450549, overlap 1450537 GCACCATTTTTTAAA GGGGTTTACAGCT TTT AGCTGTAAACCCC TTTTCTTTTGGCCAA HRM2_12800 1450810 - 1450625 - | hypothetical protein TERM 1649 1450715 - 1450756 + g 89 -15.3 -3.06162 | ACCTGCTTTCAGCGT TGCGTCAATGGGCACATAT TTCA ATATGCTCCCATTGACGCG TCTTGAAATCAGATA sseA 1452849 - 1450969 - | SseA TERM 1650 1451228 - 1451238 + g 82 -6.8 -4.86731 | opp_overlap 1451227 CTTATCCCAGCAGAC TCCC ACA GGGA TTTTATTTCAGGAAA HRM2_12820 1454795 - 1452885 - | iron-sulfur cluster-binding protein TERM 1651 1455458 - 1455438 - g 73 -3.2 -5.00616 | overlap 1455439 CTGGTTTGCAAAAAA TTGCACGG TGCTC CCATGCAG TGGGCGGCCATATTC HRM2_12830 1455276 - 1455776 + | hypothetical protein TERM 1652 1456270 - 1456282 + G 71 -5.5 -4.45083 | GCGCTACATATTCCG CGGTG TAT CATCG TTTTCTGGATCTGGA TERM 1653 1456862 - 1456884 + G 78 -12.8 -2.87463 | opp_overlap 1456862 1456866, overlap 1456866 AGGGATTCCAATGGA TCAACTCCTG GCC CAGGGGTTGA TATCTCCCGCCACTT HRM2_12840 1455975 - 1457000 + | hypothetical protein HRM2_12850 1457163 - 1457038 - | hypothetical protein HRM2_12860 1457182 - 1457481 + | hypothetical protein HRM2_12870 1457715 - 1458254 + | carbonic anhydrase / acetyltransferase family protein HRM2_12880 1459245 - 1458283 - | putative sodium/bile acid symporter family protein TERM 1654 1458626 - 1458645 + g 81 -6.4 -5.0133 | overlap 1458627 CACAGCACAATGCAC TGATTGGC CATG GCCAGTCG TTTTTTCAGGGACTG TERM 1655 1459196 - 1459146 - G 79 -8.8 -4.25104 | opp_overlap 1459155 GGTTCTTGAGGAAAA TCCCTGCCCGGGCCAGGCTGGCGC TCT GGTCCAGGATGACCAGGGCAAAGA TGAGCACGATTCCCA HRM2_12890 1460639 - 1459248 - | peptidase (M20 family protein) appF1 1461612 - 1460650 - | AppF1 TERM 1656 1461523 - 1461534 + g 78 -3.6 -5.09426 | GCTCACCCCGTTCAC GGCC TTGA GGTC TTTTTTGCCCTTGAA TERM 1657 1461632 - 1461644 + r 73 -9.1 -3.46659 | TCCCCTCCGTTTGGG CCGGT CCG ACCGG TTGCTTGTCCATGTC appD 1462628 - 1461612 - | AppD TERM 1658 1461744 - 1461756 + g 75 -9.1 -3.85698 | ACAGGCCTCAATTGC CCGGT TGC ACCGG TTTCTGAACGAGCAG TERM 1659 1461800 - 1461838 + g 76 -5.8 -4.72272 | opp_overlap 1461817, overlap 1461794 1461793 CGATGGGGGTGGGTA CCATTCCCGGTATGGAAC CCA GTTTCTCGCCGGGCAGGG TTTTTCCTGGCACCG TERM 1660 1462231 - 1462250 + g 70 -4.8 -4.64334 | opp_overlap 1462230 1462232 1462233, overlap 1462233 1462246 TTTTCAAGCAGGAAC ACGGCCCG GTCC CGGGCCTC TTTTCTTGAGGCATT TERM 1661 1462233 - 1462248 + g 86 -11.8 -3.93367 | opp_overlap 1462233 1462232 1462230, overlap 1462231 1462246 TTCAAGCAGGAACAC GGCCCG GTCC CGGGCC TCTTTTCTTGAGGCA TERM 1662 1462248 - 1462233 - G 73 -11.8 -2.51815 | opp_overlap 1462231 1462233 1462246, overlap 1462232 1462230 TTCAAGCAGGAACAC GGCCCG GTCC CGGGCC TCTTTTCTTGAGGCA TERM 1663 1462642 - 1462656 + r 74 -10 -3.18264 | ATGAGCGTCCCTCCG GGGATG TGA CATCCC TTAATCCATCGCCAA appC 1463554 - 1462625 - | AppC TERM 1664 1462714 - 1462700 - G 70 -3.4 -4.8083 | overlap 1462702 CAACACCATGAAAAA CAGGGC CAC ACCCGG GATGGTCACCAGATA TERM 1665 1462942 - 1462912 - G 80 -11.9 -3.40403 | gap 1 TTTCCCGGATCAGAA GCCAGGG-TACCGA GCAC CCGGCAGCCCTGGC TGCCTGGACATAGTC appB 1464475 - 1463558 - | AppB TERM 1666 1464506 - 1464537 + r 91 -10.3 -4.12296 | gap 1, opp_overlap 1464504 1464502 1464506 ATTGAAAAATATAGA CGGGGAAA-AAGGG ATGAA CCTTTGTTTCCCCG TTCTTTGGTTATGGC appA 1466101 - 1464557 - | AppA TERM 1667 1465042 - 1465058 + g 72 -10.1 -3.44794 | CCTTGGCCAGGAGTT CCTTGGC CTT GCCAGGG TTGTACTCGTAGGTT HRM2_12950 1467377 - 1466181 - | peptidase (M20/M25/M40 family protein) HRM2_12960 1468187 - 1467393 - | putative transcriptional regulator (IclR-family protein) TERM 1668 1467718 - 1467703 - G 71 -6.1 -4.36914 | overlap 1467705 1467707 TGTTCGGGTAGAAAA GCCAG CAGGGC CTGGC CTGCCGCTCCCATTC TERM 1669 1468113 - 1468150 + g 100 -11.9 -4.83593 | gap 1, opp_overlap 1468109, overlap 1468148 CAGAATTGAAAGGGT CCGGCGGACGCTCTGGGC GCC GCCCTGGG-GTCTGACGG TTTTTACTGGTTGTT TERM 1670 1468393 - 1468414 + r 85 -4.3 -5.49729 | overlap 1468398 CATCTTCCGTACCAG GGTAAGCAG TTGT CTGCTGTCC TTTTTTTAAGTCATT HRM2_12970 1471159 - 1468610 - | putative lysylphosphatidylglycerol synthetase (LPG synthetase) (Multiple peptide resistance factor) TERM 1671 1472874 - 1472862 - g 74 -7.7 -4.18018 | GCCCTTCATTCAAAA GCCAT TGG ATGGC CAGGAATTCAGACAG TERM 1672 1472963 - 1472974 + G 70 -2.2 -4.91459 | TGGCAAAAGACCCAG GGTT CAAG GACC TTTTTATGGATGTTG TERM 1673 1473091 - 1473105 + G 73 -2.8 -5.05606 | overlap 1473088 1473078 1473092 TTCAAGGGTGTCTGG TCCGAT ACC ATTGGG TTTGTTTTTCTTGAG TERM 1674 1473431 - 1473451 + G 76 -3.3 -5.17353 | overlap 1473430 CTGTTGTTTCCTGGG CAGTGATTG CTT TGATCATTG TTTTTTAATAAATCT lysM1 1471753 - 1473459 + | LysM1 TERM 1675 1474950 - 1474940 - g 78 -4 -5.07011 | TACAGAAAGTAAAAA CATT AAA AATG AACAGATCATGCTTC TERM 1676 1476031 - 1476056 + G 83 -9.1 -4.30014 | opp_overlap 1476029 AAATTCTTAAAACCG GGGTTTGTTCA ATTA TCAACAAACCC TTTTCAATTCATAAG HRM2_12990 1473483 - 1476107 + | sensory histidine kinase/response regulator mgtE1 1477491 - 1476127 - | MgtE1 TERM 1677 1476213 - 1476185 - G 83 -5.1 -5.19003 | AACACAAAAAAGAAA CCGCACATATCGG TGA CCGTTGTGAGCAG GGGGCTGGAGACCAG TERM 1678 1476369 - 1476358 - G 72 -3.6 -4.82901 | CCCCTTCCAGAAAAA GGCG ACCC CACC CAACAGCAGTCCAAG HRM2_13010 1477702 - 1478304 + | hypothetical protein HRM2_13020 1478528 - 1478280 - | hypothetical protein TERM 1679 1478335 - 1478345 + g 76 -4.6 -5.0133 | opp_overlap 1478335 ATATGCTCTTTAAAC CCTG CAT CGGG TTTTTTCCAAGACTG TERM 1680 1478758 - 1478784 + H 100 -14.4 -2.9296 | opp_overlap 1478759 GATAATGGTCTTCAA AGGCAGCGCCTC CTT GAGGCGTTGCCA TATCCTTGAGCTTTA TERM 1681 1478783 - 1478759 - H 100 -15.7 -3.54638 | opp_overlap 1478758 ATAATGGTCTTCAAA GGCAGCGCCTC CTT GAGGCGTTGCC ATATCCTTGAGCTTT HRM2_13030 1478846 - 1479202 + | hypothetical protein HRM2_13040 1479637 - 1479251 - | hypothetical protein HRM2_13050 1480403 - 1479657 - | hypothetical protein TERM 1682 1480198 - 1480180 - G 71 -11 -2.74461 | opp_overlap 1480180 1480169 1480182, overlap 1480179 1480182 TATTCAGGTCCAAAG CAGGCCAG AAT CTGACCTG TAATTGCCTGGTTTT TERM 1683 1480260 - 1480271 + g 76 -5.8 -4.64766 | GTCCCCAAGGATCAG CAGG CGAA CCTG TTTTTGCCCTGTACC HRM2_13060 1485173 - 1480524 - | hypothetical protein TERM 1684 1481130 - 1481144 + g 80 -4.2 -5.07567 | ATATCGAATCACTCC GCCTTT GAA AACGGC TTTTTTGACATCTGC TERM 1685 1482427 - 1482437 + g 71 -6.8 -4.19974 | overlap 1482420 ACAATGGTTTCGCCC CTGG GGC CCAG TTTCTTGACAATTTT TERM 1686 1483089 - 1483110 + g 83 -10.1 -4.18018 | overlap 1483087 1483086 CCCGGCTTCGATCAC GGCCAGGGC CGCT GCTTTGGCC TTTTCAATAAGAAAC TERM 1687 1483431 - 1483445 + g 76 -5.6 -4.89233 | GTTTATCTGTTCTCT GGCCTC TTT GATGCC TTTTTCCTGTTCATG TERM 1688 1483610 - 1483621 + g 70 -2.2 -5.03314 | opp_overlap 1483620 AAACATCCGCTTTTG GCTT GGAA AGGC TTTTTTGAAGCTGGG TERM 1689 1483901 - 1483924 + g 77 -10.2 -3.53811 | overlap 1483890 GGTTGGGGTTGGCCT GGCCCCTGGT ATCT ATCTGGGGCC TTTCACCGGCATCAG TERM 1690 1484193 - 1484240 + g 84 -4.6 -5.2204 | overlap 1484192 1484228 CCCTGGAATATTTGT GACACCGTCGGTTCTGGCTTCC AGGG GGGCGACTTGACCGGCGGTCTC TTTTTGTTCCTTGTC TERM 1691 1484228 - 1484238 + g 71 -6.8 -4.21997 | overlap 1484193 CCAGGGGGGCGACTT GACC GGC GGTC TCTTTTTGTTCCTTG TERM 1692 1485032 - 1485042 + g 70 -2.4 -5.03145 | overlap 1485027 TTGAGGCCTTGGTTC CGGG GGA CCCC TTTTTTAAACGGTTG HRM2_13070 1486562 - 1485195 - | putative ATPase (AAA superfamily protein) TERM 1693 1485660 - 1485681 + g 88 -3.7 -5.58209 | GTTTTTATGCTCTGC CCTGGAGAA TATT TTTTCAAGG TTTTTTTCGGTTTCC TERM 1694 1486039 - 1486078 + g 77 -11.4 -3.34716 | gap 1, opp_overlap 1486043, overlap 1486040 1486042 1486053 ACCATCTCAGGAGAC AGAACCAGGGCAC-CGCTG AGC CAGGGGGTGCCCTGGGTCG CTTTTTCAAGGGTCA TERM 1695 1486040 - 1486077 + g 83 -14.9 -2.60508 | gap 1, opp_overlap 1486043, overlap 1486039 1486042 1486053 CCATCTCAGGAGACA GAACCAGGGCAC-CGCTG AGC CAGGGGGTGCCCTGGGTC GCTTTTTCAAGGGTC TERM 1696 1486042 - 1486075 + g 74 -11.7 -2.83903 | gap 1, opp_overlap 1486043, overlap 1486040 1486039 1486053 ATCTCAGGAGACAGA ACCAGGGCAC-CGCTG AGC CAGGGGGTGCCCTGGG TCGCTTTTTCAAGGG TERM 1697 1486074 - 1486043 - G 91 -15.2 -3.61902 | gap 1, opp_overlap 1486042 1486040 1486039 1486053 TCTCAGGAGACAGAA CCAGGGCAC-CGCTG AGC CAGGGGGTGCCCTGG GTCGCTTTTTCAAGG TERM 1698 1486053 - 1486079 + g 86 -8.7 -4.58395 | gap 1, opp_overlap 1486043, overlap 1486042 1486040 1486039 CAGAACCAGGGCACC GCTGAGCCAGGG GGTG CCCTGGGTC-GC TTTTTCAAGGGTCAA HRM2_13080 1488409 - 1486637 - | hypothetical protein TERM 1699 1487095 - 1487079 - G 85 -3.6 -5.40474 | opp_overlap 1487091, overlap 1487080 1487091 ATGGTTTCAAAAAAA CGGCCC AGGTA AGGCCA GATAATTACCAGGCC HRM2_13090 1492618 - 1488416 - | hypothetical protein TERM 1700 1489228 - 1489242 + g 100 -5.6 -5.69793 | opp_overlap 1489219 CAATGACCTGGACTG CCATGG TGG CCACGG TTTTTTCTTTGATCT TERM 1701 1490899 - 1490873 - G 76 -7.8 -4.38712 | opp_overlap 1490873 1490875, overlap 1490875 TGCATTTTTAGAAAA GGCGCCCATGAG GAT CACAAGGGCGTC TTCAATGGGCTGCCT TERM 1702 1490904 - 1490920 + g 72 -3.6 -4.87273 | overlap 1490905 ACAAGGGCGTCTTCA ATGGGC TGCCT GCCCAG TTTTTGTAAGCTGTT TERM 1703 1492103 - 1492117 + g 91 -5 -5.40072 | CTCTCTGAGTCTGTC CTTTTC GAT GAGAAG TTTTTTTACACACAG TERM 1704 1492342 - 1492306 - G 77 -10.9 -3.6053 | overlap 1492302 GTTCCCATAAATCAA TCTGGCTACCCTCTGTT TTG AACAGGGAGTAACCCGA AGGATCCACGTAGGG HRM2_13100 1495730 - 1492650 - | hypothetical protein TERM 1705 1493332 - 1493342 + g 84 -2.4 -5.5454 | GAAACGGCCAGAATT TCCC CAA GGGC TTTTTCTTTGTTTGG HRM2_13110 1499341 - 1495727 - | hypothetical protein TERM 1706 1495806 - 1495774 - G 80 -11.9 -3.46602 | opp_overlap 1495772 1495794 1495795 TGTGGGACACGATAA TGGATCTGGCCGTGC TGG GCATGGCCTGCTCCA GGTCAGTTTTCTGGT TERM 1707 1495794 - 1495812 + g 73 -5.2 -4.67635 | opp_overlap 1495774, overlap 1495772 1495795 1495809 CTGGCCGTGCTGGGC ATGGCCTG CTC CAGGTCAG TTTTCTGGTTTTGAG TERM 1708 1496356 - 1496369 + g 78 -5.9 -4.82901 | GTTCATAGTCCCAGG CCGTG ATGC CGCGG TTTTTATGCCGCAGC TERM 1709 1496396 - 1496414 + g 77 -10.2 -3.56318 | overlap 1496395 CAGCCGTTCGCTCGC CCGGGTGT AAA ACTCCCGG TGTTGTTCTTGGACC TERM 1710 1496830 - 1496858 + g 76 -11.7 -3.02511 | overlap 1496818 CCGGGTCGGCGCTTC CCTCGGCCATTTG AAA CAGAAGGCTGAGG TGTTGGCGGGGTACA TERM 1711 1497327 - 1497342 + g 73 -6.2 -4.52857 | opp_overlap 1497318 TTAAAATCAGAAGCG CTGAAA CTGA TTTCAG TTTTGTCTGAAGCAT TERM 1712 1498089 - 1498054 - G 79 -8.1 -4.43307 | opp_overlap 1498076 1498077, overlap 1498051 CGTTTAATAAAAGAA CCGGGGCTGCCACGG CAAACC CCATGTCTGCCCGGG CCATGGTCTGGGCCG TERM 1713 1498255 - 1498243 - G 72 -4.1 -4.82901 | overlap 1498244 CCCTGTCGATAAAAA CCGTT TTT AACGA TGTCACCTTGGCCCT TERM 1714 1499050 - 1499064 + g 76 -7.1 -4.56597 | opp_overlap 1499043 AGAGGATACCCATGG CCCTG TCCGC CAGGG TTTTTAACGGCGCAA TERM 1715 1499299 - 1499317 + g 72 -3.8 -4.89063 | CCTTTTGTGCCGACC CGTCCC GGATCAG GGGATG TTTGTTTTTACATGC HRM2_13120 1499751 - 1499338 - | predicted phage baseplate assembly protein W TERM 1716 1499464 - 1499478 + g 74 -8.6 -4.01939 | opp_overlap 1499463 1499464, overlap 1499456 1499460 1499475 CGGATCGTCCATAAG CTGGAT TTC ATCCAG TTTAATTCTGGGTTC TERM 1717 1499665 - 1499683 + g 83 -5.2 -5.17576 | overlap 1499667 GATATCGGCCTGATT TACGGTGG TTT CCACGGTG TTTTTTCCCTTGATA HRM2_13130 1500071 - 1499793 - | hypothetical protein HRM2_13140 1501832 - 1500084 - | hypothetical protein TERM 1718 1500971 - 1500950 - G 70 -8.7 -3.56092 | overlap 1500965 CGATGATTTTTGAAA GCCTGCTTT GAAG AAGGCAGGC ATCGGCCAGGGTTTT HRM2_13150 1502506 - 1501829 - | hypothetical protein HRM2_13160 1502693 - 1502532 - | hypothetical protein HRM2_13170 1503167 - 1502718 - | putative phage tail protein HRM2_13180 1503620 - 1503189 - | hypothetical protein TERM 1719 1503315 - 1503329 + g 74 -4.3 -4.8622 | GACCGCTTTCCACGT CATGA CCGGT TCATG TTTTTCATTGAGCAG HRM2_13190 1505672 - 1503720 - | hypothetical protein TERM 1720 1504494 - 1504533 + g 70 -9.3 -3.60971 | opp_overlap 1504498, overlap 1504496 TGTGCCCGTACCGTA GATATTCACCGCAGCCA CGGTGT TGGCAGCGGTGAAAATG TTTCCCCATTGGGCT TERM 1721 1504496 - 1504531 + g 80 -11.9 -3.38314 | opp_overlap 1504498, overlap 1504494 TGCCCGTACCGTAGA TATTCACCGCAGCCA CGGTGT TGGCAGCGGTGAAAA TGTTTCCCCATTGGG TERM 1722 1504529 - 1504498 - G 83 -14.5 -2.89564 | opp_overlap 1504496 1504494 CCCGTACCGTAGATA TTCACCGCAGCCA CGGTGT TGGCAGCGGTGAA AATGTTTCCCCATTG TERM 1723 1505170 - 1505153 - G 74 -4.9 -4.84274 | overlap 1505160 CAAGCAGATCAAAAA TGCAAAA CCTG TCTTGCA GGGTATTGCACTGCT TERM 1724 1505388 - 1505376 - G 73 -3.3 -5.03314 | opp_overlap 1505355 GCCATTTTTAAAAAA CAGGC GCA GGCTG TCGTACATGTAAAAT HRM2_13200 1506793 - 1505696 - | hypothetical protein TERM 1725 1506285 - 1506299 + g 70 -2.8 -4.75174 | CTTTCTCCTTTCACA TGATCT CCC AGTTCA TTTTTGAGTTCCATA HRM2_13210 1507455 - 1506880 - | hypothetical protein TERM 1726 1507652 - 1507678 + r 73 -8.7 -3.53012 | gap 1, overlap 1507652 1507665 1507667 1507668 GGTCAGAATTCTTTT CC-GTGGGGGGG TATT TTCCCCCACCGG TTTGGGCCGGCGGGG TERM 1727 1507667 - 1507696 + r 78 -9.1 -3.82628 | overlap 1507652 1507652 1507665 1507668 CCGTGGGGGGGTATT TTCCCCCACCGGT TTGG GCCGGCGGGGGGC TGTTTATTTGCAATA TERM 1728 1507668 - 1507695 + r 89 -12.6 -2.88854 | overlap 1507652 1507652 1507667 1507665 CGTGGGGGGGTATTT TCCCCCACCGGT TTGG GCCGGCGGGGGG CTGTTTATTTGCAAT HRM2_13220 1509940 - 1507700 - | histone deacetylase superfamily protein TERM 1729 1508116 - 1508100 - G 76 -4.3 -5.00616 | opp_overlap 1508113 TCGGGTCTGAAAAAA CCGGTTG CTT CCACCAG CTGTTCAATCTGGAT TERM 1730 1508677 - 1508723 + g 70 -9.5 -3.25942 | opp_overlap 1508682, overlap 1508680 CAATGTCCAGGATGG CAACACGGCCG-TGCCCCCTCAG ATA CTG-GGCTGCAATGGCTGTGTTG TTCATGTAGCAGAAT TERM 1731 1509778 - 1509735 - G 71 -11.1 -2.78283 | gap 1, overlap 1509727 1509734 AGAACCATGGCAAAG CCCAT-CACCTTGTGGCGCA TATTC TCCGCCACAAAGAGAATGGG TCTGAATCTTAAGGT ddlB1 1511001 - 1509982 - | DdlB1 TERM 1732 1510641 - 1510661 + g 74 -9.7 -3.61652 | overlap 1510638 TTATCCAGTCGGCAG TGGGCAGTC CAA GACTGCGCA TTCGTTCTTTGGCCA ddlB2 1511996 - 1510998 - | DdlB2 TERM 1733 1512061 - 1512092 + r 76 -10.8 -2.52896 | overlap 1512063 GGGTTCATCATTTAT TGTGGCCGGGGCTA TACT TGGCTCCGGCCGTG TCGGTTAGAAAATGG kamA2 1513404 - 1512097 - | KamA2 TERM 1734 1513690 - 1513706 + r 84 -5.1 -5.31456 | opp_overlap 1513691, overlap 1513691 GGGACAGGCAGGCAA AGGACAT GGG ATGTCCC TTTTTTATGGATTCA TERM 1735 1513705 - 1513691 - R 73 -8.6 -3.67792 | opp_overlap 1513690 1513691 GGACAGGCAGGCAAA GGACAT GGG ATGTCC CTTTTTTATGGATTC TERM 1736 1513691 - 1513705 + r 75 -8.6 -3.77789 | opp_overlap 1513691, overlap 1513690 GGACAGGCAGGCAAA GGACAT GGG ATGTCC CTTTTTTATGGATTC HRM2_13260 1515152 - 1513725 - | sigma-54 dependent transcriptional regulator TERM 1737 1513751 - 1513764 + g 70 -2.3 -4.97402 | TGGACATTTTTTTAT CGGAT TTAA ACCCG TTTTTATCGATTTTG TERM 1738 1515216 - 1515200 - R 75 -5.1 -4.86621 | opp_overlap 1515200 ACTGTCAATCAAAAA TGGCG TGCATGC CGCCA ATCTTTCTTCCACAG HRM2_13270 1515515 - 1515267 - | hypothetical protein TERM 1739 1515625 - 1515639 + H 70 -9.2 -2.83112 | opp_overlap 1515624 1515623 TCTCCTATTGAAATC CCGGGG ACT CCCTGG TATCATCCCTTGACT TERM 1740 1516240 - 1516223 - g 70 -3.3 -4.77165 | opp_overlap 1516228, overlap 1516225 TCCTTGATAATAAAA GGTTCCC GGCA GGAATCC TGGTGGTCATATACG TERM 1741 1516351 - 1516361 + G 76 -3.2 -5.10877 | CCCTTTGGTTTTCCT TCGG GGG CTGA TTTTTCGTTTGTTCT TERM 1742 1516535 - 1516580 + G 72 -9.5 -3.41878 | TTGTGAGTTTCATGG TGGGGGGAATGCCCCTGTGCC ACGG GGCAGGGGGGCTTGCGGCCCA TTATCGGTTCGGCGC sulP1 1515688 - 1516887 + | SulP1 HRM2_13290 1516902 - 1518161 + | hypothetical protein TERM 1743 1518174 - 1518162 - f 91 -10.5 -4.2018 | overlap 1518163 AAATTTCGAAAATAA CCGGC ACG GCCGG AGCGCGTTATGGCTC TERM 1744 1518279 - 1518253 - f 71 -3.1 -4.96848 | gap 1, overlap 1518257 TGTTTCATATAAAAA TTCA-TATGTCC TATC GGACACAACGAA GCATGAAACTCGATG TERM 1745 1518801 - 1518762 - f 100 -10.6 -4.3739 | overlap 1518763 GAGTTTCTTATAAAA CCGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCACAACGA ATGATGAAACGCCTC TERM 1746 1518800 - 1518763 - f 86 -11.9 -3.22113 | overlap 1518762 AGTTTCTTATAAAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCACAACG AATGATGAAACGCCT TERM 1747 1519465 - 1519455 - g 82 -8.2 -4.56597 | opp_overlap 1519455, overlap 1519456 CCGGCGGTTTAAAAA CGGC AAG GCCG TTGTGTCGGCATCTC TERM 1748 1520296 - 1520280 - g 73 -5.1 -4.72272 | overlap 1520282 CGGTTCCAGGAAAAA GGCTG CCTTTAT CAGCC AGAGCGGCGCCTTTA HRM2_13300 1518877 - 1521261 + | hypothetical protein atpG 1522143 - 1521253 - | AtpG TERM 1749 1521797 - 1521821 + gT 77 -4.9 -4.98522 | overlap 1521801 AGGCGGGCATAAAGT CTTGCACCAAC AAC GATGGTGTGGG TTTTTGTCTGCCATT TERM 1750 1521923 - 1521942 + gT 72 -10 -2.78384 | AATGCCACAAGGATT CTGTCCCT GGAA AGGGACGG TCTGCTGGAAAGGGG atpA1 1523662 - 1522109 - | AtpA1 TERM 1751 1522344 - 1522332 - GR 100 -9.1 -5.73563 | overlap 1522334 ATGAAATCAAAAAAA CCCTG GGT CAGGG CCAGCATTACGGTCA TERM 1752 1523533 - 1523519 - GR 76 -4.2 -5.01732 | AAGCTCTTCAAAAAA GGCGTT GGC AAGGCC GGTGGCCTGGATGAT atpF1 1524441 - 1523656 - | AtpF1 atpE1 1524719 - 1524441 - | AtpE1 atpB1 1525428 - 1524712 - | AtpB1 HRM2_13360 1525723 - 1525394 - | conserved hypothetical protein associated with ATP synthase F0F1 atpI1 1526022 - 1525726 - | AtpI1 TERM 1753 1525978 - 1526002 + g 81 -12.9 -3.28791 | opp_overlap 1525977 TTTTCGGGCAACGAT TCCAGGCAGGG GCT CCTTGTCTGGA TTGTGGGACGGCCGT atpC1 1526408 - 1526019 - | AtpC1 atpD1 1527777 - 1526398 - | AtpD1 TERM 1754 1527378 - 1527339 - G 77 -9.2 -4.09685 | opp_overlap 1527338 1527337 CTGCACCCCCGAAAA GACCGGCTTTCCCTCCTT TTTC AAGGGGCGATAGCAGGTC AATGATTTTTATGCC HRM2_13400 1529189 - 1527909 - | putative phosphohydrolase TERM 1755 1528119 - 1528138 + g 74 -7.8 -4.25283 | opp_overlap 1528118 1528119 GTTCTGCCCGACAAT GGCTTGAC CACT GACAAGCC TTTTGGTGCGGGCAT TERM 1756 1528670 - 1528685 + g 76 -7.6 -4.29325 | opp_overlap 1528669 1528670 AGGCCGTCCTGAAAG TCCTTG AACA CAAGGA TTTTACCTGTTCCTG TERM 1757 1529241 - 1529216 - R 100 -17.7 -3.14132 | TTTCCGGGCCATGAA TGGGGACGGAT ATGG ATCCGTCCCCA GGGGTACAAATTTTA HRM2_13410 1530965 - 1529271 - | TonB-like outer membrane receptor protein HRM2_13420 1531445 - 1531335 - | hypothetical protein TERM 1758 1531562 - 1531550 - H 78 -10.5 -3.28712 | CTCCCTTTTTTATAA CCGGC ACG GCCGG AGCGGGGATATGGCA fbp2 1531691 - 1532725 + | Fbp2 TERM 1759 1533606 - 1533625 + G 70 -4.8 -4.67038 | overlap 1533608 ACGGATGTTGCCTGT GACCGCCC TTTT GGGCGCCC TTTTCCTTTTGGCGG TERM 1760 1533704 - 1533715 + G 85 -7.2 -4.86939 | TCATTACGGCACTCA CCGG TGCC CCGG TTTTTGGATTTCTTC HRM2_13440 1532722 - 1533762 + | predicted ABC-type transporter, permease protein (Fe3+-siderophore transport system) TERM 1761 1534496 - 1534511 + G 71 -5.4 -4.57569 | opp_overlap 1534478 GGCAGTCTCCACCCT GGAACG AACA CGTTTC TTTTTACCGGAATCG HRM2_13450 1533753 - 1534562 + | ABC-type transporter, ATP-binding protein TERM 1762 1534785 - 1534799 + G 74 -8.5 -4.05875 | opp_overlap 1534783 AGTCGCCAGGAGAGC CGGGG CATAA CCCCG TTTGAATTTTTTGAC HRM2_13460 1534575 - 1535102 + | hypothetical protein HRM2_13470 1535099 - 1535860 + | hypothetical protein HRM2_13480 1535872 - 1536708 + | hypothetical protein TERM 1763 1537162 - 1537148 - g 70 -2.7 -4.82901 | opp_overlap 1537133, overlap 1537149 GGTGTTTGAGAAAAA GCCCC AGTCA GGGGA TCTTGAGGCCGGGCT HRM2_13490 1536705 - 1537463 + | hypothetical protein TERM 1764 1537476 - 1537464 - T 78 -10.5 -3.30124 | TCTCAGTCTGTATAA CCGGC ACG GCCGG AACGAGGAATGGCTC TERM 1765 1538286 - 1538274 - T 89 -10.5 -4.04206 | CGAGTTTCATATAAA CCGGC ACG GCCGG AACGAGGAATGGCTC HRM2_13500 1538897 - 1538454 - | hypothetical protein TERM 1766 1539128 - 1539104 - H 84 -11.3 -3.1855 | opp_overlap 1539104 TTTGTTAATATCTAA TGCCCGGCGGG AGA CCTGTCGGGCA TTGTCACGTATGGAG TERM 1767 1539104 - 1539128 + H 100 -15.7 -3.34962 | opp_overlap 1539104 TTTGTTAATATCTAA TGCCCGGCGGG AGA CCTGTCGGGCA TTGTCACGTATGGAG HRM2_13510 1539152 - 1540261 + | GTP-binding protein TERM 1768 1540308 - 1540283 - T 90 -4.1 -5.63103 | gap 1, opp_overlap 1540283 CTCGAACCAAAAAAA GGGAT-ACAG TCAAAAG CTGTTATCCC TTTTTGTCTTATATG TERM 1769 1540283 - 1540308 + T 80 -4.8 -5.1764 | gap 1, opp_overlap 1540283 CTCGAACCAAAAAAA GGGATA-CAGT CAAAA GCTGTTATCCC TTTTTGTCTTATATG TERM 1770 1540539 - 1540558 + T 74 -8 -4.0257 | opp_overlap 1540539 1540542, overlap 1540531 1540542 TGGGGGGCAAGTCAA GAACTATT TTAA AATAGTTC TTATTCGTTTTTAAG HRM2_13540 1541524 - 1540559 - | putative carbohydrate kinase (PfkB family protein) HRM2_13550 1542126 - 1541524 - | phosphoserine phosphatase hom 1543464 - 1542154 - | Hom TERM 1771 1542933 - 1542959 + g 76 -8.1 -4.26344 | opp_overlap 1542940 CCTCTGCCAAAGCCT TGTCAAACGAA CAGCT TTCGTTGGACA TTTTGGTCAGGATAT TERM 1772 1543429 - 1543448 + g 74 -2.1 -5.09245 | opp_overlap 1543429 GCCGCTTCCTACAAT TCCGCAT CCGAGT ATGCCGA TTTTTATGGTTTTCA TERM 1773 1543570 - 1543586 + H 76 -8.1 -4.08216 | TAGACGGACCGCCAT GTCAAAA AAG TTTTGAC TTTTAACGGGAATAG purM 1543751 - 1544794 + | PurM HRM2_13580 1544813 - 1545814 + | metalloendopeptidase nagZ 1546824 - 1545811 - | NagZ HRM2_13600 1546908 - 1547834 + | hypothetical protein TERM 1774 1547853 - 1547863 + T 71 -4.6 -4.62471 | overlap 1547862 TCCTAGTGCTTGATC GCGT GGA GCGC TTTTTCAAGCTTGAG HRM2_13610 1548196 - 1547840 - | hypothetical protein TERM 1775 1547961 - 1547990 + g 70 -8.7 -3.49777 | gap 1, overlap 1547964 GCCGCCTTGTCTGCC CAGGAGTCA-TAGG TTT CCTGGTGACTCTTG TTGTGGTCTATCCAG HRM2_13620 1549837 - 1548197 - | hypothetical protein fucA 1550303 - 1549623 - | FucA HRM2_13640 1550402 - 1551112 + | hypothetical protein HRM2_13650 1552257 - 1551142 - | coenzyme F420-reducing hydrogenase TERM 1776 1552599 - 1552611 + G 80 -10.5 -3.78934 | opp_overlap 1552596 CATGCCAGGGAACTT GGGCG TTC CGCCC TTGTTATAACGGGCA HRM2_13660 1552515 - 1553684 + | sensory box histidine kinase (PAS/PAC domain protein) adh1 1555170 - 1553671 - | Adh1 TERM 1777 1554175 - 1554191 + g 70 -2.2 -5.00895 | TGCAGAGACCTTTTC CCCG TTAAACTTT CGGG TTTTTGTGTAATAAA TERM 1778 1554401 - 1554419 + g 70 -11 -2.64616 | GAGGTCAGGTGGTCT TCGAGGTG CCT CACCTCGG TGATGTCGGTCAGCA TERM 1779 1555221 - 1555233 + H 79 -3.3 -5.36441 | overlap 1555222 AGATGGTGTTAGTTG GGCCA ACA TGGCG TTTTTTGTCTGAAAA TERM 1780 1556451 - 1556465 + G 70 -10 -3.30159 | opp_overlap 1556451 ACGATTTTGAGAAAA TGACCG GGG CGGTCA TTGTGGAAGGATTCG TERM 1781 1556465 - 1556451 - g 87 -10 -4.3898 | opp_overlap 1556451 ACGATTTTGAGAAAA TGACCG GGG CGGTCA TTGTGGAAGGATTCG fadD3 1555403 - 1557076 + | FadD3 HRM2_13690 1557556 - 1557083 - | two-component hybrid sensor protein TERM 1782 1557450 - 1557465 + g 70 -4.7 -4.60746 | TGGTTTACCAGATTG TCCTC AGCAAC GAGGA TTTTAATCTTTTTGG HRM2_13700 1557938 - 1557642 - | hypothetical protein TERM 1783 1557749 - 1557765 + g 84 -2.1 -5.67711 | overlap 1557751 TGTTTGTTGAATATT GCCAGTC GTT GCCTGTC TTTTTGTTTTGTTTC TERM 1784 1558599 - 1558575 - g 74 -7.2 -4.183 | gap 2, opp_overlap 1558575 GCAACCTCCAATAAA CGGGG-GG-TGT ACT ACAGCCACCCCG TGTATGACCGGGCAA HRM2_13710 1558110 - 1560236 + | two-component hybrid sensor and response regulator histidine kinase HRM2_13720 1560233 - 1560871 + | two component transcriptional regulator (LuxR family protein) TERM 1785 1562459 - 1562471 + G 87 -4.8 -5.44721 | overlap 1562442 TTCAGGTGCCCTGGA GGTG CTTCC CACC TTTTTTTCGGCTGCT mae 1560999 - 1562729 + | Mae TERM 1786 1562780 - 1562747 - f 76 -10.9 -2.70275 | opp_overlap 1562748, overlap 1562744 GAATTTTACATACCA GGGCTCCTTGCCGGA TTTT TCCGGTAAGGGGCCT TTTCTATTTCGTGGG TERM 1787 1562748 - 1562779 + F 100 -18.8 -4.82128 | opp_overlap 1562747 1562744 AATTTTACATACCAG GGCTCCTTGCCGGA TTTT TCCGGTAAGGGGCC TTTTCTATTTCGTGG TERM 1788 1563251 - 1563227 - g 70 -9.2 -3.51232 | opp_overlap 1563227 1563232, overlap 1563223 GTTCCTGGAAATCAA GACCCGGGTC GAGGA GACCCTGGCC CTTGTAAAACTTTCA potA2 1562895 - 1563977 + | PotA2 TERM 1789 1564082 - 1564094 + G 79 -5.5 -5.05782 | overlap 1564078 TCAGCCTTGTGGAGA GGGAC CCT GTCTC TTTTTTCCGGTGGGT potB2 1563970 - 1564824 + | PotB2 TERM 1790 1565263 - 1565276 + G 77 -9.5 -3.72893 | TTGTAACGGTCCATG CCCGC ATCA GCGGG TTTGATCCCGCGGTG TERM 1791 1565406 - 1565425 + G 91 -4.4 -5.60993 | gap 1, overlap 1565409 1565411 AGCTTTACCCTTTCC CTGGATGAT GTT ATCATC-AG TTTTTTTGTGACAGG potC2 1564821 - 1565594 + | PotC2 potD1 1565591 - 1566622 + | PotD1 gspE2 1566636 - 1568450 + | GspE2 HRM2_13790 1568795 - 1570336 + | hypothetical protein TERM 1792 1570809 - 1570821 + G 79 -9.1 -4.25104 | GAGGCCTTTCAGTTT GCCCT CAC AGGGC TTTTGCTGGAACGGG HRM2_13800 1570329 - 1571306 + | hypothetical protein HRM2_13810 1571707 - 1571438 - | hypothetical protein TERM 1793 1571470 - 1571482 + g 82 -10.5 -3.86346 | TGAAGATACCTCGCT CCGGC CGT GCCGG TTTATAAGAAAATGC TERM 1794 1572778 - 1572792 + G 71 -7 -4.17296 | ATTACCCTGACCATG GGGGGG GAG CCCACC TTTGTCTCTGTAACG TERM 1795 1574489 - 1574470 - g 100 -9.3 -5.1356 | CCCTATGAAGAAAAA CTGGTGC ACTGGG GCACCAG CCTCCACGACCGGTT HRM2_13820 1571791 - 1575165 + | hypothetical protein TERM 1796 1575753 - 1575743 - g 74 -8.2 -4.07568 | GTTGGCCCTGGAAAA GGGC GTG GCCC AGAGAACCCGGCTTC HRM2_13830 1575345 - 1578089 + | hypothetical protein TERM 1797 1578407 - 1578387 - g 71 -11.1 -2.73829 | overlap 1578384 1578386 CCAGGTAAAGAAGAT GGTGTGGCA GCA TGCCACCCC CGAAACCATGGAGGC HRM2_13840 1578079 - 1578954 + | putative transglutaminase protein TERM 1798 1580429 - 1580454 + G 71 -7.5 -4.08557 | overlap 1580432 GCCGGCCATTGCCTA CATGGGCATCC AGAA GGATACCCCTG TTATTGTTTACGGAG TERM 1799 1580636 - 1580652 + G 77 -9.4 -3.97947 | TGATCCGGATACCCC TGGCCG GACAA CGGCCA TTTATCCTGAATACA rhdA 1579113 - 1581128 + | RhdA HRM2_13860 1582602 - 1581130 - | putative glucosyltransferase family protein TERM 1800 1582015 - 1582005 - G 70 -2.4 -4.96468 | TAAAGTTAAAGAAAA GTCC CCG GGCC GATCGAATTTGATGT TERM 1801 1582369 - 1582380 + g 73 -5.8 -4.56597 | opp_overlap 1582368 GGAATCATCAAGTAT CTGG ATAT CCAG TTTTTCCCGGGGCCA HRM2_13870 1582801 - 1583637 + | hypothetical protein HRM2_13880 1584995 - 1583655 - | hypothetical protein HRM2_13890 1584850 - 1585812 + | rhodanese-like domain/cysteine-rich domain protein TERM 1802 1585853 - 1585840 - g 100 -9.5 -5.49569 | opp_overlap 1585840 1585843 1585844 CATGAATAGAAAAAA GGGCG GGGC CGCCC CTGTTGTTCCAATCT TERM 1803 1586067 - 1586044 - g 79 -11.7 -3.28712 | GGTTCTTCTCCATAA CCCCTGCCA GGGAGA CGGCAGGGG CCGGGGAGGGCAGAT HRM2_13900 1585826 - 1586608 + | putative glycosyl transferase TERM 1804 1586654 - 1586642 - T 78 -10.5 -3.28791 | AGCGCTTTTTTATAA CCGGC ACG GCCGG AGCGAGGTATCTTCA HRM2_13910 1588835 - 1586859 - | proton/hydrogen exchanger family protein TERM 1805 1588425 - 1588441 + g 79 -7.3 -4.56597 | overlap 1588426 CAGGGTGCCCATTCG TCCTTGA TTT TCAAGGG TTTTTAACAGCACCA HRM2_13920 1589089 - 1590231 + | aminotransferase family protein HRM2_13930 1590324 - 1590623 + | hypothetical protein HRM2_13940 1591182 - 1590838 - | hypothetical protein HRM2_13950 1593009 - 1591258 - | hypothetical protein TERM 1806 1593079 - 1593068 - R 86 -3 -5.69023 | AAAACAGTAAAAAAA TGAT CATT ATCA CAACGCACAACATAT HRM2_13960 1594106 - 1593135 - | multiheme cytochrome family protein TERM 1807 1593920 - 1593930 + g 70 -2.6 -4.94992 | TTCGTCCGTGGATGG TTTT TTT AAAA TTTTTCTGCATTTCG TERM 1808 1594595 - 1594607 + G 82 -4.1 -5.31275 | overlap 1594594 1594596 TAGAACTTCGATTTT TGTTG TAA CAACG TTTTTTCTGCTCACC TERM 1809 1594682 - 1594666 - g 90 -12.3 -4.08394 | opp_overlap 1594658 AGATTGTCTGGAAAA TGGCCAG TTC CTGGCCA AAGGGGACGGTCCTT HRM2_13970 1594572 - 1595618 + | periplasmic TRAP-type dicarboxylate transporter protein TERM 1810 1595796 - 1595775 - f 75 -7.2 -4.36914 | opp_overlap 1595775 GTTGCGTTCATAAAA GCTGCCTG AACAAA CAGGCGGC TTTTTTATATTCTAT TERM 1811 1595775 - 1595796 + F 100 -9.4 -5.53436 | opp_overlap 1595775 GTTGCGTTCATAAAA GCTGCCTG AACAAA CAGGCGGC TTTTTTATATTCTAT HRM2_13980 1595894 - 1596349 + | hypothetical protein HRM2_13990 1596346 - 1597665 + | hypothetical protein TERM 1812 1597678 - 1597666 - f 78 -10.5 -3.40371 | CACTTTATCAACTAA CCGGC ATG GCCGG AGCAGGGTATTTGCT TERM 1813 1598022 - 1598010 - f 86 -10.5 -3.85698 | TGTGTTTCTTATAAA CCGGC ATG GCCGG AGCGAGGTATGGCTC HRM2_14000 1598116 - 1598847 + | cysteine-rich domain family protein (CCG family protein) TERM 1814 1600124 - 1600110 - g 71 -5 -4.45544 | opp_overlap 1600110 CCGGATCAACCAAAA TCGCAA AGT TTACGA TATCTTACTGAAACT HRM2_14010 1598860 - 1600296 + | iron-sulfur cluster-binding protein (ferredoxin family protein) HRM2_14020 1600296 - 1601048 + | hypothetical protein TERM 1815 1601367 - 1601385 + F 73 -6 -4.42235 | overlap 1601370 TTTCTTACCTTTGTG TTCCATGG ACC CCATGTAA TTATTTTTAACCATT HRM2_14030 1601417 - 1601737 + | hypothetical protein glnP2 1602444 - 1601773 - | GlnP2 TERM 1816 1602270 - 1602234 - G 84 -2.2 -5.59357 | gap 1, overlap 1602243 AGTAGATGAAAAAAA GTTGAA-GCAGGCAGGG GGTC CCCCGCAGGAATTCAAC ATAGGCGGTGACGAT glnQ2 1603217 - 1602477 - | GlnQ2 glnP3 1603884 - 1603225 - | GlnP3 TERM 1817 1603931 - 1603942 + r 71 -2.2 -5.21709 | opp_overlap 1603906, overlap 1603904 1603903 1603902 GCTGATTCCGTGCCA TCCG GGTC TGGA TTTTTTGGTCTGGAC glnH1 1604837 - 1604016 - | GlnH1 TERM 1818 1604924 - 1604906 - R 73 -3.8 -5.07107 | overlap 1604908 GAAAGCTCTAAAAAA TCCAGCAT CTA AAGCTGAA TAAAATAACAGTTGC HRM2_14080 1605322 - 1605104 - | hypothetical protein TERM 1819 1606041 - 1606023 - g 86 -3 -5.63517 | TGGGCAAAGAAAAAA GGTCTGGA TAT CCCGAACC CGGGCAATCGTGGGT TERM 1820 1606651 - 1606639 - g 83 -3.3 -5.4833 | TGAGGGAACAAAAAA TCGGG CAA CCCTA TTACAGCCTTCTGAA TERM 1821 1606784 - 1606796 + G 81 -6.3 -4.96848 | TGAAATCGGCCAGCC CCTTT TTA AAAGG TTTTTGTCTGAAAAG glpC 1605636 - 1606904 + | GlpC HRM2_14100 1607227 - 1608372 + | signal transduction family protein (GGDEF domain protein) potD2 1609862 - 1608807 - | PotD2 potC3 1610716 - 1609916 - | PotC3 potB3 1611618 - 1610713 - | PotB3 TERM 1822 1611066 - 1611054 - G 80 -4.7 -5.09173 | CAACACTTGAAAAAA GAGGC AGG GCCAC AAAGGGAAGAAACAT potA3 1612648 - 1611611 - | PotA3 HRM2_14150 1613264 - 1612719 - | putative iron-sulfur cluster-binding protein TERM 1823 1613167 - 1613186 + g 82 -12.2 -3.55444 | TTTATCCTGGCCTTT GAGGGGAT GAAC ATCCCCTC TTTAACGGCTGAACA TERM 1824 1613219 - 1613231 + g 74 -7.7 -4.16842 | opp_overlap 1613208 CATAGGTACACCTAT TGCAC CCT GTGCA TTTGTTGGGAATGGC HRM2_14160 1616469 - 1613311 - | Tungsten-containing aldehyde ferredoxin oxidoreductase TERM 1825 1615830 - 1615814 - G 71 -7.2 -4.10007 | overlap 1615803 1615804 ACAAGGTCCCCAAAA GGGGCC TGGCG GACCCC GTCAAGCAGGGGCAG TERM 1826 1616577 - 1616598 + r 95 -7.3 -5.57396 | overlap 1616578 ATTCAACGGGTGACA GCCTATGCA AAAA TGCATAGGG TTTTTTGTTGGTTGT TERM 1827 1616578 - 1616597 + r 90 -10.8 -3.91997 | overlap 1616577 TTCAACGGGTGACAG CCTATGCA AAAA TGCATAGG GTTTTTTGTTGGTTG HRM2_14170 1618162 - 1616627 - | aldehyde-ferredoxin oxidoreductase TERM 1828 1618117 - 1618131 + g 70 -2.8 -4.84363 | CAACATGGGATGTTT TTGTTG TTG CATCAA TTTTTAATAATTTAA TERM 1829 1618328 - 1618311 - H 80 -11.3 -2.57564 | opp_overlap 1618309, overlap 1618310 GCATTTTTGCATAAT CCATGCG GAGT CGCATGG GGTGTGCTGCTACTG TERM 1830 1618433 - 1618412 - g 80 -9.5 -4.01419 | overlap 1618428 GATCAATGAATTAAA GCTGAACTG GAAA CAATTCAGC AAAGCGTTTCTGAAT HRM2_14180 1618368 - 1620137 + | sigma-54 dependent transcriptional regulator TERM 1831 1620258 - 1620270 + F 76 -2.7 -5.27769 | overlap 1620242 TCAATAGAGATTCTC TATGC AAT GTATA TTTTTCATTTTTTCT hemE 1620393 - 1621469 + | HemE HRM2_14200 1621513 - 1622130 + | putative B12-dependent methionine synthase family protein TERM 1832 1622236 - 1622204 - g 100 -6.2 -5.79526 | opp_overlap 1622208 1622219, overlap 1622217 ATACGGCAAAAAAAA TCCTCCCTCAAAAG GGTTT CTCCAGAGGGTGGA GAAACTCATTGAGGC TERM 1833 1622243 - 1622217 - g 80 -9.5 -4.08064 | opp_overlap 1622208 1622219, overlap 1622204 AATCCTCCCTCAAAA GGGTTTCTCCA GAGGG TGGAGAAACTC ATTGAGGCCGCACCT HRM2_14210 1622127 - 1622774 + | hypothetical protein TERM 1834 1622891 - 1622857 - T 85 -7.2 -4.76963 | opp_overlap 1622858, overlap 1622858 CCAGAGAATAGAAAA GGGCCTTGAGATTT GATTGAA AATTCTCAAGGCCT TTTATATCGATGGTT TERM 1835 1622858 - 1622890 + T 100 -10.7 -4.55689 | opp_overlap 1622858 1622857 CAGAGAATAGAAAAG GGCCTTGAGATTT GATTGAA AATTCTCAAGGCC TTTTATATCGATGGT TERM 1836 1622890 - 1622858 - T 83 -10.7 -3.45093 | opp_overlap 1622858, overlap 1622857 CAGAGAATAGAAAAG GGCCTTGAGATTT GATTGAA AATTCTCAAGGCC TTTTATATCGATGGT HRM2_14220 1624056 - 1623022 - | zinc-containing dehydrogenase family protein HRM2_14230 1626176 - 1624053 - | molybdopterin oxidoreductase (molybdopterin binding subunit) HRM2_14240 1627390 - 1626755 - | HTH-type transcriptional regulator HRM2_14250 1628587 - 1627466 - | leucine-rich ARM-like family protein TERM 1837 1628663 - 1628634 - R 100 -10.3 -4.67692 | opp_overlap 1628638 1628643 GTAAAATGAAACAAA TATAATTAACTGA TCGT TCAGTTAACTATA TCGACAAAAAAAATT HRM2_14260 1632032 - 1628766 - | FAD/NADPH dehydrogenase/oxidoreductase family protein (4Fe-4S ferredoxin) TERM 1838 1629514 - 1629532 + g 79 -11.8 -3.22077 | opp_overlap 1629510, overlap 1629513 1629510 GCGTTAATGTAGATG TTGAGCAG GAC CTGCTCAA TCTGGTTTTTATCGG TERM 1839 1630978 - 1630964 - G 70 -8.6 -3.71527 | TGGTAATCACCGAAA GGATCA AAG TGATCC AGTAATTAAACAAAC TERM 1840 1632127 - 1632139 + H 77 -10.5 -3.23009 | CTCAGATACCCTGTT CCGGC CAT GCCGG TTACTCAAATTTTTC moaA1 1632414 - 1633403 + | MoaA1 TERM 1841 1633669 - 1633683 + G 91 -5 -5.47821 | TAAAATTTGTCATGT CGGATT TTA AATCTG TTTTTTTGAATCACT HRM2_14280 1633407 - 1635080 + | sensory box histidine kinase/response regulator HRM2_14290 1635077 - 1635730 + | two component transcriptional regulator (LuxR family protein) TERM 1842 1636429 - 1636415 - g 70 -10 -3.23711 | TGCAGAACGGATGAA CTGCAC CGG GTGCAG GGCGTGTGAATATGC TERM 1843 1636781 - 1636763 - g 70 -8.8 -3.60792 | TCCTGAATGTGTAAA GGCCTGCA AAG CACAGGCC GGCAATCCACTGGGA HRM2_14300 1636215 - 1636928 + | FAD/NADPH dehydrogenase/oxidoreductase family protein (4Fe-4S ferredoxin) TERM 1844 1637211 - 1637226 + G 84 -2.4 -5.55664 | opp_overlap 1637212, overlap 1637212 1637213 CGGGTTTATTAAGCC ATGCCG AAGT CGGCGG TTTTTTTGGTAATGA aor4 1636931 - 1638730 + | Aor4 TERM 1845 1638802 - 1638751 - f 77 -8.2 -3.97241 | opp_overlap 1638749 1638761 AGAAAAAGGATCAAA CAGACATTAACTATCAGCCG GGATTTAGTTTT CGTCTGATGGTTAATGCCTG CATATCTGCGATATC TERM 1846 1638839 - 1638850 + G 74 -4.4 -4.76213 | opp_overlap 1638839, overlap 1638834 AATCCCAATGGAAAA TTCC CGAA GGAA TTTTATTCAATTTCT TERM 1847 1639154 - 1639141 - g 73 -5.3 -4.71426 | opp_overlap 1639141 CTGCCATTAAGAAAA TTCCT AAAC AGGAA GTTGTGCTGGGCAAG fdx5 1638831 - 1639532 + | Fdx5 hdrA3 1639532 - 1640788 + | HdrA3 hdrA3' 1640775 - 1642601 + | HdrA3' TERM 1848 1642667 - 1642648 - g 76 -2.8 -5.18371 | opp_overlap 1642648 1642649 1642652, overlap 1642643 1642649 1642652 GGTTACAAAAGAAAA TCAAGATC CGAA GATCCTGG TTTTTGCCTGCCGGT mvhD4 1642598 - 1643113 + | MvhD4 fdhB4 1643116 - 1643964 + | FdhB4 TERM 1849 1643993 - 1644008 + GF 71 -8.2 -3.51825 | ATTTGCCCCTATTGC GGCTGC GGCT GCGGCC TTATCCTTGAGGTGG TERM 1850 1644652 - 1644666 + GF 84 -10 -3.75884 | TCATATTCTGGACTG CGGTCT TGA AGACCG TTCATTTGTTTCCCA fdhA4 1643909 - 1646008 + | FdhA4 HRM2_14380 1645989 - 1646429 + | putative heterodisulfide reductase, subunit HdrC TERM 1851 1646755 - 1646789 + G 76 -11.4 -3.31144 | opp_overlap 1646783 1646785 GTGTATTCCCGCCTG TCCCGTCCGTGCCATT GAA AAGGGCAAAGACGGGA TTGTCCGGATCAACC TERM 1852 1647667 - 1647617 - g 78 -9.9 -3.95153 | gap 1, opp_overlap 1647619 1647657, overlap 1647649 GGAATTATCGACAAA GATGCTTTAAGACA-GGGGATTTC ACCT GAAATTCCCATGTCCGAATGCATC ATGTGCATGCGATGC HRM2_14390 1646492 - 1647760 + | iron-sulfur cluster-binding protein TERM 1853 1647969 - 1647980 + G 80 -4.4 -5.06414 | ACCGGCATCCTGTCT GATG GCCG CATC TTTTTGTTCAAGCGA TERM 1854 1648590 - 1648600 + G 79 -5.4 -4.99861 | overlap 1648596 TACAGAACAAGTTGA TACC CGG GGTA TTTTTATCCTTGATC TERM 1855 1648811 - 1648794 - g 86 -3.4 -5.53288 | TGGAATTGAAAAAAA GGCAAC GTCACA ATTGCC TCCTGGTATATCCAT TERM 1856 1649069 - 1649097 + G 100 -19 -3.57144 | opp_overlap 1649061 AAAAAGTTCTCCGCT GCATTCCCGGTC AGGAC GACCGGGAATGC TTTAACAATAAGCGG aor5 1647757 - 1649124 + | Aor5 HRM2_14410 1649614 - 1649117 - | hypothetical protein TERM 1857 1649337 - 1649347 + g 74 -2.4 -5.14965 | opp_overlap 1649331 ATATTGAAATAACGG GCCG TCA CTGC TTTTTTGATGGAGAT TERM 1858 1649821 - 1649804 - H 70 -5.5 -4.56597 | overlap 1649784 TTTTTTCTTTAAAAA GCCTGGA AAAA TACAGGC CCATACATAGAGATA TERM 1859 1650221 - 1650238 + G 100 -9.9 -4.64861 | TTGCCGCCTTTGACG GGACATC AGTG GATGTCC TTTATTTTAAAACCC TERM 1860 1650922 - 1650948 + G 72 -3.6 -4.85545 | overlap 1650924 GGACGCATCGTCATT GACGGCCC CCCATCCCTCC GGGCCGCC TTTTATTCGTTTGAT TERM 1861 1651296 - 1651309 + G 76 -5.9 -4.59853 | overlap 1651294 GGATATCGGCAATGC CCCGG GGGG CTGGG TTTTTACCAAATTAC polB 1649998 - 1652412 + | PolB HRM2_14430 1652954 - 1652448 - | putative outer membrane protein TolC TERM 1862 1652477 - 1652492 + g 70 -10.4 -2.92898 | overlap 1652476 1652472 TCATATACTGGTTAA GCCTGG TCAT CCAGGC ATTTAACTCTTTTTT TERM 1863 1652603 - 1652613 + g 74 -6.8 -4.431 | opp_overlap 1652576 AGCGCTGGTCAGCCA CCAG GGA CTGG TTTTGTGCATCGATG TERM 1864 1652753 - 1652781 + g 70 -9 -3.5525 | CGCGGATCAGGTGGA CCGCATTGAGAA TTTGT TTTTCAATGTGG TTTGCCAGGCTGTCT HRM2_14440 1653383 - 1653162 - | transcriptional regulator (OmpR family protein) HRM2_14450 1655971 - 1653680 - | sensory box histidine kinase/response regulator TERM 1865 1654068 - 1654078 + g 80 -4.6 -5.2166 | opp_overlap 1654039 CCTTCAGCAACCGAC GCCT CCA GGGC TTTTTTCGATTCTTC TERM 1866 1655119 - 1655131 + g 70 -3.3 -4.87892 | opp_overlap 1655119 CCTTGGTCGAAGTCA GGGGA AAC TGCCC TTTCTTTTGTTCCAG TERM 1867 1655607 - 1655593 - G 83 -10 -4.15044 | TGTCCTGGTAATAAA CCCATG CGG CATGGG GCAACCTGGAACGAA TERM 1868 1656329 - 1656341 + r 78 -10.5 -3.29511 | CATCCATACCCTGCT CCGGC CAT GCCGG TTATCCGGACATCCA HRM2_14460 1657379 - 1656342 - | hypothetical protein TERM 1869 1657220 - 1657198 - G 86 -3.2 -5.59534 | opp_overlap 1657207 1657209 1657218, overlap 1657199 AACCATAAGAAAAAA GCCGCCCTTC CCA GGATGGAGGC GCCTTCCGCCTGTGT lolD1 1658074 - 1657388 - | LolD1 HRM2_14480 1659411 - 1658071 - | ABC-type transporter, permease protein HRM2_14490 1660112 - 1659552 - | putative NosL protein TERM 1870 1660346 - 1660366 + G 72 -8.3 -3.92625 | CCCCTTGTACTTGCC TTTCCCGGA AAG TCCGGAAAA TTTGATTCCCATCTA HRM2_14500 1660256 - 1660942 + | hypothetical protein HRM2_14510 1661908 - 1660943 - | hypothetical protein HRM2_14520 1663201 - 1662278 - | putative sugar nucleotide epimerase cydB1 1664348 - 1663329 - | CydB1 TERM 1871 1664141 - 1664121 - G 79 -11.1 -3.60805 | ATAGGCCAGGGGAAA GGCGGCAAA AAG TCCGCCGCC GCCCATCACCAGCCA cydA1 1665747 - 1664341 - | CydA1 TERM 1872 1664796 - 1664784 - G 73 -6.2 -4.51097 | opp_overlap 1664787, overlap 1664776 GGAACGACCAGAAAA CCGG GGCAA CCGG CGGTCGACGGTCCGC TERM 1873 1665079 - 1665058 - G 88 -10.9 -4.1552 | opp_overlap 1665073 GAGCGGTGCAACAAA CACGGCCAT GAGC ATGGCCATG GCAAACATGACCTTT TERM 1874 1665281 - 1665271 - G 72 -8.2 -3.96327 | ATCGCCTATCATAAA CCCC TGG GGGG TCTGCATCCAGGAAT TERM 1875 1665518 - 1665492 - G 93 -9.4 -5.00616 | opp_overlap 1665478 CCTTGTCGGAAAAAA CCGACCAGTTGG TGC CGAACTGGTAGG AGAGCACCACCCCGG TERM 1876 1665877 - 1665889 + H 70 -7.7 -3.61468 | CATCGTCCATGGCGC CCCTT AAA AAGGG TTAATTTCCTTGACA HRM2_14550 1666070 - 1666816 + | hypothetical protein TERM 1877 1666985 - 1666971 - g 71 -5.6 -4.56597 | CCTTGCCGTCAAAAA CCAGGC CCA GCCCAG GAAAATAATGGTGAT TERM 1878 1667075 - 1667050 - g 80 -13.4 -3.00298 | opp_overlap 1667047 1667065 CTCTTGAATGATATA TCCCTGTGGT TTGAAC ACCACAGGGA CCGTGTCTGCCTGGC TERM 1879 1667700 - 1667710 + G 70 -8.2 -3.65827 | overlap 1667683 GTTTGCCATGGGGCA CGGC CAG GCCG TTTCAATCGGCATTG TERM 1880 1667891 - 1667874 - g 72 -4.1 -4.78848 | TCTTGAAATAGAAAA CGGACTT GAGG AATTCCG GCTGCACCTGGGGGG aroB2 1666819 - 1668063 + | AroB2 ubiG 1668748 - 1668050 - | UbiG TERM 1881 1669202 - 1669216 + G 76 -4.2 -5.04385 | overlap 1669196 1669196 CCGGGATTGTCCTGG CAGGGA TTA TCACTG TTTTTTCCGGGTATA TERM 1882 1669300 - 1669284 - g 100 -2.9 -5.9873 | overlap 1669286 GGACGATAAAAAAAA CATCCAC CCT GCGGACA AAAAAGGAACCGACC TERM 1883 1669298 - 1669286 - g 73 -5.5 -4.6341 | overlap 1669284 ACGATAAAAAAAACA TCCAC CCT GCGGA CAAAAAAGGAACCGA HRM2_14580 1669054 - 1669977 + | putative polyprenyltransferase HRM2_14590 1670102 - 1669929 - | hypothetical protein HRM2_14600 1670618 - 1670121 - | hypothetical protein TERM 1884 1670549 - 1670494 - G 70 -2.6 -4.90918 | gap 1, opp_overlap 1670533, overlap 1670501 ACAAAAGTAATAAAA GCAAAAAGAGCGGACAACAGAGAAATA TAG TATCTGTTAGTTG-CCGCCCGCCTTGC ACTGACACGGTCGGT TERM 1885 1670542 - 1670501 - G 74 -2.3 -5.17786 | gap 1, opp_overlap 1670533, overlap 1670494 TAATAAAAGCAAAAA GAGCGGACAACAGAGAAATA TAG TATCTGTTAGTTG-CCGCCC GCCTTGCACTGACAC HRM2_14610 1671028 - 1670615 - | hypothetical protein TERM 1886 1670805 - 1670844 + g 80 -3 -5.34655 | gap 1, opp_overlap 1670809 1670810, overlap 1670809 1670810 TTGCTATAGCTGGAG TAAACGCCTGCCATGATAA TAA TTAT-ATGGCAGCCCTGTA TTTTATTTTTAATTG HRM2_14620 1671450 - 1671040 - | hypothetical protein HRM2_14630 1671747 - 1671475 - | hypothetical protein HRM2_14640 1671880 - 1672122 + | hypothetical protein TERM 1887 1672131 - 1672156 + T 74 -9.9 -3.20227 | opp_overlap 1672136, overlap 1672136 AGCGTAAGTCTCTAT GGAAACTGAAT ATTT ATTCAGTTTTC TGTTACTCCTTGCCA TERM 1888 1672136 - 1672151 + T 77 -6.2 -4.71186 | opp_overlap 1672136, overlap 1672131 AAGTCTCTATGGAAA CTGAAT ATTT ATTCAG TTTTCTGTTACTCCT dbp 1678124 - 1672239 - | Dbp TERM 1889 1673289 - 1673273 - G 71 -10.9 -3.07816 | opp_overlap 1673259 CTTTCAGCCATGGAA TGACCGA AAT TCGGTCA AAATAATCCCAAATC TERM 1890 1674208 - 1674196 - G 70 -9.1 -3.61398 | TCTTTCGGGTAATAA GCCAG TCC CTGGC TGGTCCAAATTCGTC TERM 1891 1674978 - 1674946 - G 91 -6.8 -5.09762 | gap 1, opp_overlap 1674945 1674947, overlap 1674947 ACGGTAACACAAAAA GGGGCGGCCTGGGCC CGGC GGCCT-GCCCGCCCT GTTCTCTGTTGATAA TERM 1892 1674977 - 1674947 - G 77 -10.3 -3.64773 | gap 1, opp_overlap 1674945 1674947, overlap 1674946 CGGTAACACAAAAAG GGGCGGCCTGGGCC CGGC GGCCT-GCCCGCCC TGTTCTCTGTTGATA TERM 1893 1674947 - 1674977 + g 82 -12.5 -3.43033 | gap 1, opp_overlap 1674947 1674946, overlap 1674945 CGGTAACACAAAAAG GGGCGGCCTGGGCC CGGC GGCCT-GCCCGCCC TGTTCTCTGTTGATA TERM 1894 1677093 - 1677103 + g 74 -4 -5.0133 | ATCAATGGAGAGGGT GAAA TAC TTTC TTTTTTCCAAAAGTG TERM 1895 1677311 - 1677298 - G 100 -8.1 -5.4505 | TTTCTTAACAAAAAA GCCAC TTCT GTGGC CTGTGCACCGCTGTA HRM2_14660 1681572 - 1678117 - | hypothetical protein TERM 1896 1680926 - 1680940 + g 80 -2.8 -5.2189 | overlap 1680937 GCCTCTAATCTCGAT TTGCCT CTA AGGGAA TTTTTTCCTCCTTGC TERM 1897 1681248 - 1681270 + g 71 -6.2 -4.31692 | opp_overlap 1681215 1681238 1681253 1681254 ACATACAGGCAATTC GGAAAGCCTG CCA CAGGACTTCC TTTTGGTGCTGGGTT TERM 1898 1683524 - 1683504 - g 86 -8.3 -4.66833 | TGGCAATTTTAAAAA TTCCTCCCC TCA GGGAAAGAA GCGGTGATTTAAGTT HRM2_14670 1682450 - 1683961 + | sigma-54 dependent transcriptional regulator TERM 1899 1684348 - 1684363 + G 79 -5.4 -4.98672 | overlap 1684349 GGTGAAAGATGCCCA TCACCT CTCA AGGTGG TTTTATGTTTTTACC TERM 1900 1685202 - 1685225 + G 70 -2.3 -5.03994 | overlap 1685205 1685212 CCGACCTTTTGATCC GTGCCGGCT GGGTAA AGCGGGTGC TTTTTCTATGTGACC TERM 1901 1686524 - 1686490 - g 79 -5.6 -5.03314 | TGCATCCTTAAAAAA GGACATAGCCCCCCTG ATG CAATGGGTCGATATCC GGGGGCATGCCGACG TERM 1902 1687070 - 1687083 + G 70 -2.3 -4.91084 | opp_overlap 1687070, overlap 1687061 1687071 TTCTATCCTGAAAAT GCCAG GTCT CTGGA TTTTATTATTCGGTC TERM 1903 1687224 - 1687207 - g 71 -7.1 -4.12599 | overlap 1687220 AAGAATGCTTCAAAA CCATATT GCAA AATATGG ATCCATAGAAATAGA hsdR1 1683995 - 1687393 + | HsdR1 TERM 1904 1688011 - 1688028 + G 79 -8.4 -4.39998 | ACCGTTGCCGATCCT GCCTGC GGTACA GCAGGC TTTCTTGTCTCCGTC hsdM1 1687456 - 1688967 + | HsdM1 hsdS1 1688964 - 1690145 + | HsdS1 HRM2_14710 1690146 - 1691789 + | hypothetical protein TERM 1905 1692005 - 1691992 - g 79 -5.3 -5.03747 | AAATGCCGTAAAAAA CCTTT TTAA AAAGG CGTTATACAAGCGTA HRM2_14720 1691789 - 1692673 + | hypothetical protein HRM2_14730 1692897 - 1693124 + | hypothetical protein TERM 1906 1693135 - 1693172 + F 100 -11.5 -4.09739 | gap 1, opp_overlap 1693131 1693135, overlap 1693137 GGTAGGAATAAGGAA TGCACCAAAGGG-GAATC ATC GATTGGCCCTTTGGTGTA TTTTCAACCGGTTGC TERM 1907 1693172 - 1693135 - f 76 -9.3 -3.56142 | gap 1, opp_overlap 1693135 1693137, overlap 1693131 GGTAGGAATAAGGAA TGCACCAAAGGG-GAATC ATC GATTGGCCCTTTGGTGTA TTTTCAACCGGTTGC TERM 1908 1693137 - 1693170 + F 93 -11.9 -3.64488 | gap 1, opp_overlap 1693135 1693131, overlap 1693135 TAGGAATAAGGAATG CACCAAAGGG-GAATC ATC GATTGGCCCTTTGGTG TATTTTCAACCGGTT HRM2_14740 1693453 - 1694121 + | hypothetical protein HRM2_14750 1694122 - 1694814 + | hypothetical protein HRM2_14760 1694817 - 1696274 + | putative kinase TERM 1909 1697350 - 1697335 - g 74 -4.7 -4.88388 | opp_overlap 1697325 1697335, overlap 1697325 1697319 ACAATGGCATAAAAA GCCTT GTGGGA AAGGC GTTATCTGCATGTCC TERM 1910 1697901 - 1697883 - g 83 -3 -5.37593 | opp_overlap 1697887, overlap 1697885 1697887 GCCTAAAGGAAAAAA TAGACCGG GAA CCGGTTTT TACTACACTCAAAAG TERM 1911 1697897 - 1697887 - g 70 -8.2 -3.73212 | opp_overlap 1697887, overlap 1697885 1697883 AAAGGAAAAAATAGA CCGG GAA CCGG TTTTTACTACACTCA TERM 1912 1697887 - 1697897 + G 86 -8.2 -4.7373 | opp_overlap 1697887 1697885 1697883 AAAGGAAAAAATAGA CCGG GAA CCGG TTTTTACTACACTCA TERM 1913 1698052 - 1698064 + G 73 -5.5 -4.65895 | opp_overlap 1698050 1698052 1698053, overlap 1698050 1698053 TCCTAAGGTAGAACA TGCCT GGC AGGCG TTTTTGAATGAGCAC HRM2_14770 1696283 - 1699606 + | hypothetical protein TERM 1914 1700398 - 1700381 - g 70 -2 -5.00616 | gap 1, opp_overlap 1700371 1700382, overlap 1700383 CCTGGCCCGAAAAAA TA-CGGG ATTTG CCCGCTA CTTAAGTTCTTATCT HRM2_14780 1699590 - 1701071 + | hypothetical protein TERM 1915 1701577 - 1701557 - g 84 -2.5 -5.61881 | overlap 1701551 TCGGAAAAACAAAAA GCCTGCCTT GAA AAGAGAGAC GCTTTGGATTTGCTT TERM 1916 1701752 - 1701731 - g 87 -4.5 -5.45813 | overlap 1701741 GATGAAAAAAGAAAA GTTTTAGAA GCGT TTCAAAAAC AGATAGATGATAAAC TERM 1917 1702107 - 1702096 - g 70 -3 -4.82667 | GGAGCAGATGAAAAA TTAC CGTA GTAA AGACCAGGAAACTAT TERM 1918 1702137 - 1702119 - g 72 -8.2 -3.86835 | overlap 1702111 GTAAAGACCAGGAAA CTATCCAG GAA CTGAATAG GGAATTGATCCAGTA HRM2_14790 1701074 - 1703644 + | hypothetical protein HRM2_14800 1703722 - 1705536 + | hypothetical protein TERM 1919 1705600 - 1705580 - f 86 -9.7 -4.03978 | overlap 1705581 AATCCGGTATAGAAA TCCATACCC TCA GGGTATGGT CAGAGTTCAAAGGCT TERM 1920 1705599 - 1705581 - f 95 -13.2 -3.01905 | overlap 1705580 ATCCGGTATAGAAAT CCATACCC TCA GGGTATGG TCAGAGTTCAAAGGC TERM 1921 1706447 - 1706419 - g 70 -8.3 -3.67622 | overlap 1706415 1706422 1706433 TACCTTCAAAATCAA CAATAAAAAAGAG CTC CTCTCATTTATTG AGAAAAAACCGGATC HRM2_14810 1705919 - 1707076 + | putative carbamoylphosphate synthase, large subunit HRM2_14820 1707104 - 1707853 + | hypothetical protein HRM2_14830 1708073 - 1707810 - | hypothetical protein HRM2_14840 1708291 - 1708070 - | hypothetical protein HRM2_14850 1708582 - 1708436 - | hypothetical protein HRM2_14860 1708777 - 1709223 + | putative MarR family protein fdx6 1709407 - 1709622 + | Fdx6 HRM2_14880 1709625 - 1710011 + | hypothetical protein HRM2_14890 1710063 - 1710263 + | hypothetical protein TERM 1922 1711319 - 1711309 - g 76 -8.2 -4.17048 | GGCCCTCCAAAAGAA GGCG GCG CGCC TGGTCCGGGAATGGG TERM 1923 1711735 - 1711722 - g 78 -2.3 -5.22481 | overlap 1711723 TATAAAGAAAGAAAA CCTCT TAAA AGCGG CACTGGCCTACGTTG HRM2_14900 1710265 - 1712007 + | FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein) TERM 1924 1712102 - 1712090 - g 87 -4.9 -5.38958 | ATCCAGAAACAAAAA TATCT CAA AGATA AGGGGATGTTCATCC HRM2_14910 1712072 - 1713274 + | drug resistance transporter (permease of major facilitator superfamily) TERM 1925 1713301 - 1713317 + F 74 -10.1 -3.14211 | CCTAGGTGATGTTGC CGGGCTG AAT CAGCCTG TTCATGACACAACCT HRM2_14920 1713650 - 1713835 + | hypothetical protein TERM 1926 1714140 - 1714125 - g 70 -3.2 -4.7629 | opp_overlap 1714125, overlap 1714118 1714127 TGAGGAATGGAAAAA GGCTTC TCCT GAAGAC CTTCCATGGGAAACA HRM2_14930 1713919 - 1714161 + | hypothetical protein TERM 1927 1714383 - 1714362 - g 72 -3.7 -4.82901 | overlap 1714364 GCTGTTGCACAAAAA TGGAAAAGC TGTC GCCTTTCAA TTAGATCAGAATGAA HRM2_14940 1714282 - 1714518 + | hypothetical protein hemN1 1715478 - 1714603 - | HemN1 HRM2_14960 1716288 - 1715494 - | putative dehydrogenase/reductase family protein HRM2_14970 1717398 - 1716409 - | zinc-containing oxidoreductase HRM2_14980 1717565 - 1717891 + | transcriptional regulator (MarR family protein) TERM 1928 1717888 - 1717877 - f 71 -3 -5.0133 | GACTGGGGGAAAAAA CATT TTGG AATG TGAGGGCTTTTCCTT TERM 1929 1718083 - 1718066 - f 74 -10.5 -2.63208 | overlap 1718051 1718065 1718064 TGGGATTTAAAAATC CCCCGGC CGCC ACCGGGG TGCTGATGATATTAT HRM2_14990 1718153 - 1718338 + | hypothetical protein HRM2_15000 1718540 - 1718716 + | hypothetical protein TERM 1930 1719445 - 1719455 + G 71 -6.8 -4.26189 | opp_overlap 1719433, overlap 1719433 CAAGCGCATGGTAGA CCAG GAG CTGG TTTTGCGCTTTCTGG HRM2_15010 1718759 - 1719907 + | hypothetical protein HRM2_15020 1719900 - 1721000 + | putative ATP-dependent endonuclease (OLD family protein) HRM2_15030 1720997 - 1721983 + | hypothetical protein TERM 1931 1723914 - 1723902 - g 83 -5.5 -5.0916 | CTGGCAAGATAAAAA TCCGA TAA CCGGA AAATGGTATGTTAAT HRM2_15040 1722190 - 1725177 + | two component protein (response regulator/sensory box histidine kinase) TERM 1932 1725223 - 1725211 - T 77 -6.3 -4.59591 | AACAAAACATCAAAA GTATC AAT GATAC CAGATCAAATCTTGA zntA 1728117 - 1725733 - | ZntA TERM 1933 1726069 - 1726086 + g 70 -2.6 -5.03145 | CGCATCGTTTACGCC GTCGCC CACCAT GGCAAC TTTTTTGCCCGATTG TERM 1934 1726933 - 1726949 + g 73 -2.9 -5.00616 | opp_overlap 1726933 TAAGATGTCCTCAAA CCGCT GGGTCTG GGCGG TTTTTTCGGACAGAC TERM 1935 1727080 - 1727094 + g 71 -7 -4.18197 | GACCGTGTCCTGGGG CCGGAC ATT GGCCGG TTTTGCCTCGCCGGT TERM 1936 1727565 - 1727553 - G 74 -6.9 -4.30576 | TGGCCATGAGGAAAA CCGGC CAG GCCAG AAGCTGCACGGCATG TERM 1937 1727715 - 1727727 + g 70 -4.7 -4.65895 | GATTAATATCAGCAG CAGGG TAT CCCAG TTTTTCAATGGCGGC HRM2_15060 1728781 - 1728266 - | hypothetical protein TERM 1938 1728332 - 1728353 + g 72 -3.5 -4.88407 | overlap 1728338 ACTTTCAACAGACAT GGAGCTTGC CAGG GCTGGCGCC TTTTTGCTTCCATAG HRM2_15070 1729012 - 1728782 - | hypothetical protein HRM2_15080 1729289 - 1729014 - | hypothetical protein TERM 1939 1729072 - 1729058 - G 73 -6.4 -4.50257 | ACAGAATATAATAAA TCGTCC ATA GAACGA TACCGCCAACGATCA TERM 1940 1729368 - 1729358 - R 87 -4.6 -5.44119 | overlap 1729360 1729363 1729365 GCTATCTGAAAAAAA GAGC ATA GCCC ACCAGGGCAAAGCTT TERM 1941 1729381 - 1729360 - R 70 -5.7 -4.36089 | overlap 1729358 1729363 1729365 TATCTGAAAAAAAGA GCATAGCCC ACCA GGGCAAAGC TTGCCCCAATGGCTG HRM2_15090 1729598 - 1729344 - | putative cbb3-type cytochrome C oxidase maturation protein CcoS fixO 1730559 - 1729627 - | FixO fixN 1731848 - 1730556 - | FixN TERM 1942 1730617 - 1730607 - G 79 -6.8 -4.60713 | GAAAATATTATAAAA CCCT GAC AGGG CAGATAGAAAAATTA TERM 1943 1731963 - 1731981 + r 73 -3.8 -4.91873 | opp_overlap 1731958, overlap 1731961 AATTATGACAGGACA GCCAGC AGTCCAG GTTGGC TTTTTCCTTCCTGTG HRM2_15120 1732575 - 1731946 - | cytochrome c family protein TERM 1944 1732518 - 1732480 - G 72 -8.1 -3.92716 | overlap 1732481 TGAAAACAACTTAAA CTGGGAAACAAGGGTCA GGGGG CGGCCCTTGGTTCCCAC CAGAACCACCAGAAC TERM 1945 1732517 - 1732481 - G 73 -11.6 -2.94545 | overlap 1732480 GAAAACAACTTAAAC TGGGAAACAAGGGTCA GGGGG CGGCCCTTGGTTCCCA CCAGAACCACCAGAA mopC 1733822 - 1732566 - | MopC TERM 1946 1733432 - 1733421 - G 87 -4.4 -5.38054 | CCGGACAAATAAAAA CTGA GGAT TCAG CCACACCTCCTTGCC TERM 1947 1733739 - 1733715 - G 86 -8.5 -4.59653 | AATGAAAAATAGAAA TCCCCCACCGG CAA CCAGTGCAGGA ATGAGGAACACACTC HRM2_15140 1734334 - 1733819 - | hypothetical protein mopB 1735654 - 1734338 - | MopB TERM 1948 1735327 - 1735309 - G 70 -3 -4.7629 | GGATGAAGGGAAAAA GCCCTGCA ATG CACACGGC AAAGACGGTCATGGT TERM 1949 1735891 - 1735903 + r 80 -10.5 -3.54029 | AATACCCCTCTCGCT CCGGC CGT GCCGG TTATAATTCCTGCAC mopA 1738918 - 1735904 - | MopA TERM 1950 1736090 - 1736102 + g 73 -6.2 -4.56133 | overlap 1736084 CTGAATCTCCCCGTC CCGG ATTTC CCGG TTTTCGTTCTTGGCA TERM 1951 1736751 - 1736787 + g 100 -5.7 -5.56263 | overlap 1736735 CCATGGCCAGCAGAT TCGCCATGGCTGTTGCC CAC GGTCATGGACAGGGCGA TTTTTCTTTTGTACT TERM 1952 1738713 - 1738727 + g 73 -3.4 -5.0133 | opp_overlap 1738714, overlap 1738714 CCTTCGAGTTTAATG ACGCGG CCT TCGCGG TTTTTTGCAAGGATA ubiE4 1739930 - 1739118 - | UbiE4 TERM 1953 1739366 - 1739384 + g 100 -10.2 -5.00616 | opp_overlap 1739362 GTTTTGAGAACTCCA GGCAGCAC ATG GTGCCGCC TTTTTTCAACACACG TERM 1954 1739506 - 1739488 - G 71 -6.7 -4.12902 | opp_overlap 1739477, overlap 1739477 GAATCATCTGGAAAA GAGATGC TTTCC GCATCCC CCTGGACAAAGGTTA ubiB1 1741728 - 1740013 - | UbiB TERM 1955 1741402 - 1741434 + g 87 -7.7 -5.05782 | overlap 1741376 1741426 TACCCTGGCAATTGT CTCCAGGGGCAGG GGGGGGA TCTGGTCCTGGAG TTTTTTAAACTCACT TERM 1956 1741521 - 1741511 - G 74 -6.8 -4.38712 | opp_overlap 1741509 1741511 CCGAGCTTGATAAAA CTGG GGC CCAG TCTTTCCATGGCAAG HRM2_15190 1741979 - 1741725 - | hypothetical protein TERM 1957 1742121 - 1742135 + H 70 -2.8 -4.96646 | opp_overlap 1742121 AAAATTGACATGAAA TTACAG TCT CTGTTA TTTTTAATTGTATGC HRM2_15200 1742143 - 1742304 + | hypothetical protein HRM2_15210 1743052 - 1742567 - | hypothetical protein TERM 1958 1743087 - 1743110 + r 70 -5.4 -4.4836 | ATGATGGATTGTTCA GAATTAATAG TTGC CTCTTAATTC TTTTAAATTTTATTC HRM2_15220 1743932 - 1743615 - | hypothetical protein HRM2_15230 1744083 - 1744436 + | hypothetical protein TERM 1959 1744437 - 1744450 + F 76 -9.5 -3.46482 | opp_overlap 1744430 GATAAAGATGCATGA CCGGC TTAG GCCGG TTGATTCATTCAGTT TERM 1960 1744673 - 1744709 + F 100 -16.8 -5.63517 | GGTAGTGGGTTATTG TCAGGCTTTTTCAGCG AGAAA CTCTGAAAAAGCCTGA TTTTTTATTTGGCAG TERM 1961 1744888 - 1744872 - g 80 -10.9 -3.77177 | ATGAAGAGATTGAAA GGCTGTT TAA AACAGCC AGGGAAGTTCGTAGA TERM 1962 1745040 - 1745026 - g 76 -2.8 -5.08824 | overlap 1745027 CCGGTATCGAAAAAA CGAATC CGA GATTCT GGCCGCTGCAAGAGA bioB2 1744748 - 1745815 + | BioB2 TERM 1963 1745953 - 1745941 - T 80 -10.5 -3.4082 | GAAATAACCCTATAA CCGGC ACG GCCGG AGCGAGGTGTCTGCT acd5 1747916 - 1746108 - | Acd5 HRM2_15260 1749706 - 1747937 - | hypothetical protein TERM 1964 1748264 - 1748252 - G 71 -6.3 -4.42788 | TCCAATCCCATAAAA TTCAC CTT GTGAA TAAACTTCCTTCTTG TERM 1965 1748975 - 1749008 + g 71 -10.2 -3.08508 | overlap 1748971 1748964 CGTTTTCCGGGGATG GACGGTCCCGTCCA GCACCA TGGGCGCGACCGCC TGCTTTTCCGGAATG TERM 1966 1749775 - 1749741 - R 100 -8.5 -5.0133 | gap 1, overlap 1749742 1749743 CAGTCGTGGAAAAAA TTGCCCGGCCACGTTC AAGG GAACG-GGCCGGACGG TCAAAAAACAATTTA TERM 1967 1749774 - 1749742 - R 93 -12 -3.60316 | gap 1, overlap 1749741 1749743 AGTCGTGGAAAAAAT TGCCCGGCCACGTTC AAGG GAACG-GGCCGGACG GTCAAAAAACAATTT TERM 1968 1749773 - 1749743 - R 100 -15.5 -2.75708 | gap 1, overlap 1749742 1749741 GTCGTGGAAAAAATT GCCCGGCCACGTTC AAGG GAACG-GGCCGGAC GGTCAAAAAACAATT HRM2_15270 1751218 - 1749800 - | hypothetical protein TERM 1969 1751275 - 1751261 - H 71 -4.3 -4.82678 | TTATAAAAAGCAAAA CAGTA TCAAT TACTG CCTGCATCAAACCAA HRM2_15280 1751746 - 1752405 + | transcriptional regulator (GntR family protein) TERM 1970 1753190 - 1753179 - g 78 -5.8 -4.80178 | CACGAATTAAGAAAA CTGG ACAG CCAG GCAAAGCAGGCCGGG HRM2_15290 1752840 - 1754027 + | saccharopine dehydrogenase-like protein (NADP+, L-glutamate forming) HRM2_15300 1754170 - 1754973 + | ABC-type amino acid transporter, periplasmic amino acid-binding protein TERM 1971 1755030 - 1755070 + F 82 -10.5 -3.57792 | opp_overlap 1755032, overlap 1755034 GGTTAGACCGATAAT TACGGTGTGCCTTCCTGAG TTG TTTGGGAAGGCATACTGAA TTTACCAATGGATGG TERM 1972 1755034 - 1755066 + F 83 -12.1 -2.64803 | opp_overlap 1755032, overlap 1755030 AGACCGATAATTACG GTGTGCCTTCCTGAG TTG TTTGGGAAGGCATAC TGAATTTACCAATGG TERM 1973 1755296 - 1755306 + G 83 -5.4 -5.19003 | CAGGTCCACCCCGCT TCTG GTT CAGA TTTATTTTTTCTATT HRM2_15310 1755078 - 1755758 + | ABC-type amino acid transporter, permease component TERM 1974 1755951 - 1755961 + G 74 -8.2 -3.96624 | overlap 1755950 ATGTCTCGTTTGTAA GGGG AAC CCCC TTTGTCGTCCAGGTG TERM 1975 1756254 - 1756238 - g 74 -6.6 -4.36914 | GTCCTGCTGATAAAA GATACC TCGGT GGTATC GGTGATCGGGGTGAT HRM2_15320 1755761 - 1756414 + | ABC-type amino acid transporter, permease component glnQ3 1756433 - 1757170 + | GlnQ3 TERM 1976 1757350 - 1757339 - g 70 -4.4 -4.63218 | TGGGCGGCAATAAAA CAAG GAAG CTTG AATTCCTCGTTGGCG TERM 1977 1758128 - 1758106 - g 76 -3.3 -5.08824 | overlap 1758107 GGGGTATTTAAAAAA GGCCAGACC GTCTT GTTCTGGCA TACCGGCGGATCTCC dcyD1 1757191 - 1758201 + | DcyD1 TERM 1978 1758347 - 1758374 + T 79 -11.2 -2.94199 | overlap 1758330 1758341 ACGGGGTCTCAAGGC TCAGGCTCCGGC CTTT GCCCGGGCCTGG TCTGCTTCATCCATC HRM2_15350 1758892 - 1758347 - | hypothetical protein TERM 1979 1758657 - 1758668 + g 82 -3.6 -5.24129 | ATGGTGTTCAGAATG GCTG GTCG CGGC TTTTTTGTGGGAACC mrcB 1761216 - 1758889 - | MrcB TERM 1980 1761192 - 1761171 - G 100 -2.9 -5.85178 | AATATCCAAAAAAAA GTCCGGC ACATCCCA GCAGGAC CAGTATGAAAATCGT thiE 1762049 - 1761390 - | ThiE HRM2_15380 1762394 - 1762188 - | hypothetical protein HRM2_15390 1762478 - 1763494 + | signal transduction family protein (GGDEF domain protein) TERM 1981 1763838 - 1763824 - g 87 -10 -4.40804 | GACGACTGCAGAAAA TGGGGA ATC TCCCCA CCGGAGTGGAAGGTC HRM2_15400 1763650 - 1763901 + | hypothetical protein HRM2_15410 1764463 - 1763891 - | hypothetical protein adh4 1764796 - 1765962 + | Adh4 HRM2_15430 1767455 - 1766088 - | sigma-54 dependent transcriptional regulator/response regulator HRM2_15440 1768656 - 1767439 - | two-component hybrid sensor and response regulator histidine kinase adh6 1769798 - 1768656 - | Adh6 TERM 1982 1770118 - 1770104 - H 89 -6.4 -5.31456 | TCAAGTCATAAAAAA GGCAAA TGT CTTGCC ATAATAATCTTATGA TERM 1983 1770970 - 1770984 + G 76 -2.8 -5.08011 | GGTTCCAAAAGAAGC GGCA AAGCAAA TGCC TTTTTTACAGGTTTT TERM 1984 1771187 - 1771200 + G 80 -3.1 -5.24531 | gap 1 TCATCTCCCAGGAAG GGC-TG TTT CATGCC TTTTTTGTGGACAAT HRM2_15460 1770247 - 1771518 + | endopeptidase family protein clcA 1772457 - 1772876 + | ClcA gap3 1772887 - 1773066 + | Gap3 gpmA1 1773017 - 1773820 + | GpmA1 pdxK 1773987 - 1774862 + | PdxK TERM 1985 1775348 - 1775312 - g 72 -9.5 -3.36135 | gap 1, overlap 1775301 AGAACGGCGAACCAA CGCCCTCTCCCCGC GGTCAGGGTG GC-GGAAGAGGGCG GGGTATAGCCGGCGG HRM2_15510 1774957 - 1775457 + | hypothetical protein TERM 1986 1775593 - 1775617 + G 70 -4.9 -4.63218 | overlap 1775588 GGTTGCGCGGTGGCC GCTGGCGGCAA TAT TTTCTGGCAGC TTTTCTTGGCGCAAC TERM 1987 1775622 - 1775638 + G 78 -10.1 -3.91488 | overlap 1775629 TTTCTGGCAGCTTTT CTTGGCG CAA CGCCAGG TTGTTTAGGCGCCTT TERM 1988 1776320 - 1776345 + G 100 -9.8 -4.84017 | CTTTCTTACGCTGTT TGTTGAAGGG ACTATC CCCTTCAGCA TTTTTATGGCCAGTT TERM 1989 1776405 - 1776415 + G 79 -5.4 -5.03314 | CCGTTACTTGCTGAA TCTC GTC GAGA TTTTTTAAAGGTAAA TERM 1990 1777344 - 1777334 - g 84 -2.4 -5.64421 | AGCCGAAAGAAAAAA CCTC TAT GGGG CAATGCCTGTACCGG HRM2_15520 1775469 - 1777406 + | putative selenocysteine protein TERM 1991 1777382 - 1777435 + T 88 -6.8 -5.17488 | opp_overlap 1777388 1777391, overlap 1777391 GCACGAGGAGTATGC AAAAAATAAGGGGGTGCAGATTTA ACAACG TAAATCTGCACCCCCTTTTCATAA TTTTATTTTACTCTT TERM 1992 1777429 - 1777388 - T 100 -19 -5.1101 | opp_overlap 1777382 1777391, overlap 1777391 GGAGTATGCAAAAAA TAAGGGGGTGCAGATTTA ACAACG TAAATCTGCACCCCCTTT TCATAATTTTATTTT TERM 1993 1777391 - 1777426 + T 100 -20.7 -4.43571 | opp_overlap 1777388 1777391, overlap 1777382 GTATGCAAAAAATAA GGGGGTGCAGATTTA ACAACG TAAATCTGCACCCCC TTTTCATAATTTTAT TERM 1994 1777426 - 1777391 - T 100 -20.7 -4.64763 | opp_overlap 1777391 1777382, overlap 1777388 GTATGCAAAAAATAA GGGGGTGCAGATTTA ACAACG TAAATCTGCACCCCC TTTTCATAATTTTAT mscC2 1779033 - 1777462 - | MscC2 TERM 1995 1778239 - 1778218 - G 70 -3 -4.7871 | gap 1 AATGATGACTAAAAA CTGGATCAG GTTAA CTG-CCCAG CGAAATCCCCCTTCT TERM 1996 1778564 - 1778577 + g 78 -3.9 -5.10208 | GCCTTTTGAAGGGTT TTATC CTCG GATAA TTTTTCTTCAGCTTC TERM 1997 1778588 - 1778601 + g 84 -2.4 -5.65513 | GATAATTTTTCTTCA GCTT CTTTCA AAGC TTTTTTTGCTTCCTG TERM 1998 1778703 - 1778713 + g 76 -5.4 -4.86001 | CTTTTTCGGCCTTTT GGAT TTC ATCC TTTTTGTAGAGTGCT HRM2_15540 1781402 - 1779102 - | hypothetical protein TERM 1999 1779346 - 1779356 + g 93 -8.2 -5.0916 | opp_overlap 1779346 1779343 TCCAGTAAACAATCA CCGG CAT CCGG TTTTTCTGTTGGGGC TERM 2000 1781251 - 1781279 + g 82 -8.1 -4.46581 | overlap 1781249 1781271 GGATGCAGGTGTTTT GTCCGTGGACG ATATGTC CGGCCATGGAC TTTTCTGGCGTTTTC TERM 2001 1781484 - 1781444 - H 70 -3.5 -4.85599 | gap 1 TTTATTGTATAAAAA TGAATTG-AGTCATAACT ATAATA AGATAGGACTTCAATTCA GGAATGCCACTTTGT TERM 2002 1782903 - 1782891 - g 100 -5.5 -5.7946 | overlap 1782892 GCCTTAAGAAAAAAA CGCAG GAA CTGCA TAAAAGCCTTAATGG TERM 2003 1783297 - 1783280 - g 86 -2.7 -5.5604 | gap 1 GCAATCAAGAAAAAA GGCTCTTA TTA CAAG-GCC AAATATTACAAACTG HRM2_15550 1782260 - 1783516 + | transposase for insertion sequences IS116, IS110 and IS902 (IS111A/IS1328/IS1533 family protein) HRM2_15560 1784012 - 1784254 + | hypothetical protein TERM 2004 1784510 - 1784498 - f 100 -10.5 -4.3739 | overlap 1784499 GAGTTTCTTATAAAA CCGGC ACG GCCGG AGCGAGGTATAGCTC TERM 2005 1784536 - 1784499 - f 74 -9.7 -3.22113 | overlap 1784498 AGTTTCTTATAAAAC CGGCACGGCCGGAGCGA GGTA TAGCTCCGGCCTCAACG AATTTTGAAACACCT TERM 2006 1785584 - 1785568 - g 74 -4.4 -4.79223 | opp_overlap 1785583, overlap 1785570 GCAGATGAGGAAAAA TAGACC GGGCT GGTCCA TGCTGCTCATGTTGT TERM 2007 1785960 - 1785996 + G 79 -6.5 -4.59773 | ATCGTGAGGGCCCGT CCCCCGGCGAAGAAG CAACCCT TTTTTCCGCCGGTGG TTTTTCCGGGTGGGA HRM2_15570 1785404 - 1787044 + | multidrug efflux system, outer membrane subunit HRM2_15580 1787037 - 1788080 + | multidrug efflux system, efflux pump HRM2_15590 1788093 - 1789895 + | multidrug efflux system, ATP-binding protein (ATPase) HRM2_15600 1789888 - 1791021 + | ABC-type transporter, permease component HRM2_15610 1791021 - 1792142 + | ABC-type transporter, permease component TERM 2008 1792336 - 1792309 - f 78 -2 -5.48514 | ACGAACAAATAAAAA CAGATCCCGA TCGGTTTT TCGGAATATG AATTTGACGGAAAAG dcyD2 1792539 - 1793558 + | DcyD2 TERM 2009 1793593 - 1793624 + F 80 -10.2 -3.53224 | TGGCTGTTTTATATG GGGTCAGGCTTT CCTTAAAA AAAGCCCGACCC TTTCCAGCAAGACTG TERM 2010 1794193 - 1794172 - g 87 -9.5 -4.39748 | overlap 1794169 1794190 CATTATATAAAAGAA GGAATCCTC AAAG GAGAATTCC AGCCGGGAAGCAAAG HRM2_15630 1794115 - 1794783 + | transcriptional regulator (GntR family protein) TERM 2011 1794844 - 1794832 - T 71 -4.8 -4.62336 | opp_overlap 1794805 1794804 ACCCCATTGGAAAAA CAGG GTAAT CCTG GGACCGTTATAGCTC HRM2_15640 1796422 - 1794851 - | radical SAM domain protein (Fe-S oxidoreductase) TERM 2012 1795086 - 1795111 + gT 71 -6.9 -4.15453 | gap 1, overlap 1795087 CCCATGCCCATGATG ATGGT-GTGGCA GGC TGCCACAACCAG TTTTGACATCCATTG TERM 2013 1795087 - 1795110 + gT 77 -10.4 -3.0879 | gap 1, overlap 1795086 CCATGCCCATGATGA TGGT-GTGGCA GGC TGCCACAACCA GTTTTGACATCCATT TERM 2014 1795990 - 1796010 + gT 73 -7.5 -4.08706 | GTTCAAACTCTCCCA CGGCAATGG AAT CCACTGCTG TTTGTGTGGTAAGGA HRM2_15650 1797699 - 1796368 - | radical SAM domain protein (Fe-S oxidoreductase) TERM 2015 1796610 - 1796642 + gr 100 -11.9 -3.83066 | opp_overlap 1796613, overlap 1796592 1796613 TGGCATGGATTTCAA GGATCCGGTCCAGGG TTT CCCGGGTCTGGATTC TTTCCTGGTCTCCTT TERM 2016 1796613 - 1796639 + gr 86 -10 -4.03811 | opp_overlap 1796613, overlap 1796592 1796610 CATGGATTTCAAGGA TCCGGTCCAGGG TTT CCCGGGTCTGGA TTCTTTCCTGGTCTC TERM 2017 1797394 - 1797379 - GR 71 -6 -4.323 | opp_overlap 1797381, overlap 1797380 1797381 TGCAAACAGGGAAAA TGCCGG TCCC CCGGCC AGTATCCTTGCCCGG TERM 2018 1797393 - 1797380 - GR 72 -9.5 -3.18657 | opp_overlap 1797381, overlap 1797379 1797381 GCAAACAGGGAAAAT GCCGG TCCC CCGGC CAGTATCCTTGCCCG TERM 2019 1797417 - 1797381 - GR 90 -12.9 -2.50471 | opp_overlap 1797381 1797408, overlap 1797380 1797379 CAAACAGGGAAAATG CCGGTCCCCCGGCCA GTATCCT TGCCCGGGGGGCCAG GGCCCTTGCAAGGGC HRM2_15660 1799232 - 1797706 - | O-methyltransferase, family 2 TERM 2020 1798001 - 1797971 - G 86 -11 -4.07687 | opp_overlap 1797994 1797997 AGCCGCTTGTGAAAA TCCCTGCCCGGGGG CGC CCCCTGGACCAGGA TGGCCTGTGTGTAGG TERM 2021 1798976 - 1798922 - G 74 -2 -5.21709 | gap 1, opp_overlap 1798923, overlap 1798923 CGGTAGAGGAAAAAA GCCCCCATGTAGCCTTCC-CTGTCT GGTACG AGAAAGCGGGAGGCGACCTGGGCGT TGTACCAGTGGTCCC HRM2_15670 1801113 - 1799239 - | sodium/solute symporter family protein TERM 2022 1799565 - 1799604 + g 90 -8.6 -5.00765 | gap 1, overlap 1799566 1799568 CAAGGATCTCCGGTG CTG-CCATGGCCGTGGC CGGTGTT GCCATGGCCGTGGTCAA TTTTTCTGCTTCGTT TERM 2023 1799566 - 1799603 + g 82 -12.1 -3.58832 | gap 1, overlap 1799565 1799568 AAGGATCTCCGGTGC TG-CCATGGCCGTGGC CGGTGTT GCCATGGCCGTGGTCA ATTTTTCTGCTTCGT TERM 2024 1799568 - 1799600 + g 86 -14.9 -2.90341 | overlap 1799566 1799565 GGATCTCCGGTGCTG CCATGGCCGTGGC CGGTGTT GCCATGGCCGTGG TCAATTTTTCTGCTT TERM 2025 1800944 - 1800917 - G 74 -2.5 -5.19212 | overlap 1800924 AGGAGCATGAAAAAA CCGATAACGGC CAGGAT GCCGCCGGCGG TGAGCCAGGATGCCG TERM 2026 1801220 - 1801191 - R 91 -7.2 -5.31275 | gap 1, opp_overlap 1801191 TGCCAGCATAAAAAA TCCCC-AGCTGAC ACACG ATCAGCCCGGGGA TTTACCATCTCTCCG HRM2_15680 1801522 - 1801388 - | hypothetical protein HRM2_15690 1803426 - 1801537 - | signal transduction family protein (GGDEF domain protein) TERM 2027 1801784 - 1801814 + g 100 -12.6 -4.54477 | ATGATGGACTGATCT CTTTTGCCGATGGC AAT GCCGTCGACAAAGG TTTTATCAATTTTCA TERM 2028 1802918 - 1802900 - G 82 -8.1 -4.56775 | opp_overlap 1802887 AGGCTGTCGTAAAAA GCCAGCT GATTG AGCCGGC CCTGGATTTCATTGT HRM2_15700 1805645 - 1803495 - | sensory box histidine kinase/response regulator TERM 2029 1804775 - 1804787 + g 76 -6.3 -4.7254 | opp_overlap 1804785 GGACAGGCGCTGCAT TGGAT GAA ATCCA TTTTTCATGGCCCCT HRM2_15710 1807114 - 1805642 - | signal transduction histidine kinase pstS4 1807974 - 1807126 - | PstS4 HRM2_15730 1809843 - 1807999 - | putative sensory box histidine kinase/response regulator TERM 2030 1809374 - 1809404 + g 91 -7.5 -5.06451 | gap 1, opp_overlap 1809372 1809370 1809374 1809376, overlap 1809376 TGGTTTTTAAAGATA TAGGCCCGGTCAGC ATCG GCTG-CCTGGCCGA TTTTTTCCAGTACTG TERM 2031 1809402 - 1809376 - G 70 -10.1 -3.18571 | gap 1, opp_overlap 1809376 1809374, overlap 1809374 1809372 1809370 GTTTTTAAAGATATA GGCCCGGTCAGC ATCG GCTG-CCTGGCC GATTTTTTCCAGTAC HRM2_15740 1810270 - 1809902 - | hypothetical protein TERM 2032 1810084 - 1810097 + g 79 -6.7 -4.59511 | CGGCCACACTGTTTG CCTTG GATT CAAGG TTTTTGAGAAATATT HRM2_15750 1810617 - 1810267 - | hypothetical protein HRM2_15760 1811633 - 1810614 - | ABC-type phosphate/phosphonate transport system, putative periplasmic component TERM 2033 1811114 - 1811130 + g 83 -8.7 -4.2828 | CGTCAAGGTCGGCAA GGGTTCT GAC AGGACCC TTTTGGTGGGTCAAC HRM2_15770 1812549 - 1811614 - | hypothetical protein HRM2_15780 1814091 - 1812616 - | hypothetical protein HRM2_15790 1815391 - 1814285 - | iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) TERM 2034 1815486 - 1815472 - gH 76 -10 -3.24232 | opp_overlap 1815472, overlap 1815470 CCCCCTTTAAACATA CCCCTT GGC AAGGGG GGGTCTTACCATACA TERM 2035 1815608 - 1815621 + GH 70 -3.1 -4.86001 | GGTCGGTCACATCTA TGACT TGGC GGTCA TTTTTATGGCCTGAT TERM 2036 1815654 - 1815689 + GH 71 -7 -4.17048 | gap 1, opp_overlap 1815654 1815658, overlap 1815659 TTTAATGTCCATGAA TATAGGGGTCCCTCT ATCGACC GGAGGGACCC-TGTA TTATTTTAAAACAAG TERM 2037 1815659 - 1815685 + GH 89 -11.6 -3.41798 | opp_overlap 1815658 1815654, overlap 1815654 TGTCCATGAATATAG GGGTCCCTCT ATCGACC GGAGGGACCC TGTATTATTTTAAAA HRM2_15800 1815370 - 1816314 + | putative HTH-type transcriptional regulator TERM 2038 1816435 - 1816421 - g 74 -4.9 -4.80455 | overlap 1816423 GATTGAAACACAAAA GACGG TCACG CCGCC ACCGGTGGAGGTCAA HRM2_15810 1816311 - 1817468 + | RND efflux transporter (HlyD family secretion protein) TERM 2039 1817484 - 1817472 - f 78 -10.5 -3.37028 | ACCAACAGCTGATAA CCGGC AGG GCCGG AGCAGATATGGCTTA TERM 2040 1817977 - 1817966 - g 87 -4.4 -5.44119 | opp_overlap 1817966 GTGACGGTAAAAAAA GCTT CAAA AAGC TTTCTCCTGGTGGCC TERM 2041 1819795 - 1819771 - g 79 -8.5 -4.3129 | opp_overlap 1819782 CATTGACTATGAAAA GGCCGAAGCCC TCG GGGTTTCAACC TCGGATATTACTTCG TERM 2042 1820689 - 1820677 - g 100 -10.5 -5.54079 | CGAAAAACGAAAAAA GGCCG GAC CGGCC ATCAAAGAGGTAACC HRM2_15820 1817573 - 1820716 + | RND efflux pump (AcrB/AcrD/AcrF family protein) TERM 2043 1821311 - 1821291 - g 95 -6.1 -5.4505 | CTGGCCAACAAAAAA CTGCTCTGC CTT GCAAAGGAG ACCTGCAGGGCATAC HRM2_15830 1820706 - 1822133 + | RND efflux transporter, outer membrane lipoprotein TERM 2044 1822548 - 1822560 + F 86 -10.5 -3.76169 | overlap 1822559 GAGCCATACCTCGCT CCGGC CGT GCCGG TTATATTAATCTTGA TERM 2045 1823752 - 1823765 + G 74 -3.8 -5.02074 | opp_overlap 1823752 GATGATGAAATAAAG GTGG AATTGA CCAC TTTTTTGGAGACTGA TERM 2046 1824187 - 1824175 - g 84 -10.5 -4.00476 | overlap 1824166 GAAATTCAGTATAAA CCGGC ACG GCCGG AACGAGGGATGGCAT HRM2_15840 1822603 - 1824279 + | hypothetical protein HRM2_15850 1824276 - 1824452 + | hypothetical protein HRM2_15860 1826699 - 1824738 - | sigma-54 dependent DNA-binding response regulator TERM 2047 1825889 - 1825902 + g 100 -2.3 -6.41805 | overlap 1825890 GATGGTTTTCCTTCT GGAGC TTGA GCTCG TTTTTTTTTTGCTCG TERM 2048 1825890 - 1825901 + g 71 -5.8 -4.42643 | overlap 1825889 ATGGTTTTCCTTCTG GAGC TTGA GCTC GTTTTTTTTTTGCTC HRM2_15870 1828248 - 1826851 - | putative glutamate/gamma-aminobutyrate antiporter TERM 2049 1827902 - 1827891 - G 74 -4.4 -4.86033 | AAAGCCCCACAAAAA CCTT GTTA AAGG CCAGGGACTCGTCAA HRM2_15880 1828402 - 1828235 - | hypothetical protein TERM 2050 1828485 - 1828502 + G 80 -9.9 -4.07687 | opp_overlap 1828485, overlap 1828486 1828488 GGAGTCACACAAAAA CCAGACA GATG TGTCTGG TTTTCGGACACGAGT TERM 2051 1828502 - 1828485 - g 100 -9.9 -4.99035 | opp_overlap 1828485 1828486 1828488 GGAGTCACACAAAAA CCAGACA GATG TGTCTGG TTTTCGGACACGAGT HRM2_15890 1828423 - 1828656 + | hypothetical protein HRM2_15900 1828948 - 1829103 + | hypothetical protein TERM 2052 1830267 - 1830296 + G 72 -8.5 -3.91897 | gap 1, opp_overlap 1830257 GAAAAGGGAATCTCC GTTGCC-CTGGCCG CCC TGGCCGGCGGCACC TTTGTGGGTGAGGCC mttB5 1829259 - 1830731 + | MttB5 TERM 2053 1831693 - 1831710 + G 71 -5.5 -4.53765 | TTATCTTTCTCTCAA CCATGTC CCTG GCCATGG TTTTCTACTATATCT HRM2_15920 1830810 - 1831973 + | Major facilitator family protein TERM 2054 1831986 - 1832022 + F 100 -14.6 -3.06492 | gap 2 TAGGGTTTAACTCCA TGACCCCGGCAGGGCAGT GCT ATT-CCCTGCCGGGG-CA TGTTCAAATAAATAA mttB6 1832049 - 1833530 + | MttB6 HRM2_15940 1835210 - 1833729 - | putative signal transduction family protein (GGDEF domain protein) TERM 2055 1834271 - 1834281 + g 89 -2.4 -5.70829 | TCAAGGTGAGAGCTT CCAG CTG CAGG TTTTTTTGTCCTATT TERM 2056 1834858 - 1834832 - G 82 -7.2 -4.59773 | opp_overlap 1834837 1834845 TTCCAGCCTCAAAAA GAGGATCTTCCC CGA GGATTGATCCTC TTAAATGCCTTTCTG TERM 2057 1835272 - 1835256 - R 86 -12.3 -2.52464 | TTCCGGTTGAACGCA GCCATGG GCC CCATGGC CGCGCCCGAAAAAAG norV 1836516 - 1835290 - | NorV TERM 2058 1836210 - 1836220 + g 80 -4.6 -5.06816 | opp_overlap 1836210, overlap 1836187 1836195 TTGTGCAATAAATAA CGCC TTT GGTG TTTTTCTTGCAAAAT HRM2_15960 1836654 - 1836791 + | hypothetical protein ach1 1836871 - 1838394 + | Ach1 HRM2_15980 1839289 - 1838498 - | putative cytoplasmic metal-dependent hydrolase (TatD family protein) TERM 2059 1838826 - 1838836 + g 76 -8.2 -4.19414 | overlap 1838827 AGGGCCAGAATTTCC CGGG TAA CCCG TTGTTTATCCTTTCT HRM2_15990 1839538 - 1839699 + | hypothetical protein TERM 2060 1840093 - 1840064 - g 90 -12.1 -4.11216 | gap 1, opp_overlap 1840058, overlap 1840065 GCTGCAGCCGGAAAA GTGCCCATGGCCCG CCA CGGGGCACGGGC-C ATCACCTCTGTCTGT TERM 2061 1840093 - 1840065 - g 77 -12.3 -3.06515 | opp_overlap 1840058, overlap 1840064 CTGCAGCCGGAAAAG TGCCCATGGCCCG CCA CGGGGCACGGGCC ATCACCTCTGTCTGT trpD1 1839734 - 1840843 + | TrpD1 HRM2_16010 1840868 - 1841068 + | hypothetical protein TERM 2062 1842303 - 1842291 - g 80 -3.3 -5.34857 | opp_overlap 1842291 TGAAATAAAACAAAA GGCCA TAC TGGTC TTTGCCGGTGACCAC cobT2 1841068 - 1843173 + | CobT2 TERM 2063 1843175 - 1843154 - T 79 -6.7 -4.68593 | TTGACGAGGCAAAAA TTTCAAGAA GTCC TTCCTGAAA AGCGGGGTACCGGGA HRM2_16030 1844482 - 1843232 - | hypothetical protein TERM 2064 1843642 - 1843631 - G 76 -4.4 -4.99043 | GTCGGATAAAGAAAA GACA GGGT TGTC TGTAAGGTTTTTTTC TERM 2065 1843681 - 1843694 + g 74 -4.5 -4.8487 | CATATTGTTTTACCT GGTGG GCAA TCACC TTGTTTTTTTCGTCC TERM 2066 1843735 - 1843718 - G 79 -8.5 -4.30719 | opp_overlap 1843718 1843717 TTCGTCCACAAGAAA GGCAAAA CCGG TTTTGCC CTTTGTCCATTTTGC TERM 2067 1843869 - 1843895 + g 73 -5.1 -4.64591 | overlap 1843870 GATGTCTTTCCTAGG AGGGTCTGC CAGGAAAAA GCAGACCCC TTTTGTATATCCTTA TERM 2068 1844279 - 1844293 + g 100 -2.8 -6.00086 | overlap 1844267 GGTTTTGGGGTAGAG CCCA AATTTGA TGGG TTTTTTTTGTCCTGT TERM 2069 1844402 - 1844428 + g 76 -6 -4.72007 | ATCGCAGGCTATGCA TTTGAACGAGAC GGT GTTTTGTTTAAA TTTCTTTTCATCAAC HRM2_16040 1844956 - 1844504 - | putative transcriptional regulator HRM2_16050 1844904 - 1845128 + | hypothetical protein TERM 2070 1845824 - 1845808 - g 71 -7.9 -4.07568 | GCCTTTCCCGGAAAA GCCAAGG TTG CCATGGC CAGTGCTAAGGGCAA cat1 1845607 - 1846977 + | Cat1 TERM 2071 1847913 - 1847895 - g 70 -3 -4.89054 | opp_overlap 1847898, overlap 1847897 GGGAGAAAAAAATAA GGGCATGG CAG CCATGTTC CTGATGATGAACGAG TERM 2072 1848477 - 1848461 - g 76 -2.9 -5.08824 | GGCTGATCGAAAAAA CCATAAC CGC GTCAAGG GAGGTTAAAGGCCTG acd6 1847044 - 1848846 + | Acd6 TERM 2073 1849266 - 1849251 - g 71 -10.4 -3.17146 | opp_overlap 1849265 1849265, overlap 1849249 1849247 CCTGTCCATAACAGA GGTGGC GGCG GCCACC CGTCGTCCAGACCGG hbd1 1848883 - 1849731 + | Hbd1 TERM 2074 1850784 - 1850796 + G 76 -5.5 -4.87389 | CAAAAGCATTGTCAG CTCCT TTG AGGGG TTTATTTTTACCCTG TERM 2075 1850957 - 1850943 - g 70 -4.2 -4.74103 | opp_overlap 1850943, overlap 1850945 GTGTGAACTTAAAAA GGTCCT TGC AGGAAC TGTTGCCAAACGTGA TERM 2076 1851376 - 1851390 + G 73 -5 -4.64766 | opp_overlap 1851376 GCCATTAATGATAAT CTCATT GAA AGTGAG TTTTTCGGATATAAA HRM2_16090 1849885 - 1852113 + | sigma-54 dependent DNA-binding response regulator TERM 2077 1852749 - 1852788 + F 100 -15.7 -4.38712 | GAACATTTTTATTCT GTCCCTGTCCGCCGGCC TTGCCT GGCTGGCCCACAGGGAC TTTTATCAACGTACA HRM2_16100 1852832 - 1853206 + | rhodanese-like domain family protein TERM 2078 1853218 - 1853245 + F 100 -12.8 -5.44721 | GTGATCTGATCTCCA TACCGGTAGGTA CAGC TGCCTGCCGGTA TTTTTTTCCCATGGT TERM 2079 1853408 - 1853423 + G 100 -11.8 -5.11063 | GTTCCCTTTAACCTG GCCCGG CCCA CCGGGC TTTTTGTTAACTGCT TERM 2080 1853805 - 1853792 - g 74 -2.3 -5.09426 | opp_overlap 1853794, overlap 1853793 1853794 TTTAATCCCAAAAAA GTGGC CATG GTCAC GGCCTTTTCAGTGCC HRM2_16110 1853279 - 1854028 + | putative permease HRM2_16120 1854062 - 1854271 + | hypothetical protein HRM2_16130 1854337 - 1854651 + | hypothetical protein HRM2_16140 1856599 - 1854698 - | putative TRAP-type transporter, 4TM/12TM fusion protein TERM 2081 1855364 - 1855391 + g 73 -12.1 -2.54325 | gap 1, opp_overlap 1855360 1855382, overlap 1855363 1855360 1855375 1855376 GGTGGTAACCATGCC CCTGG-CGCCTT GTGCA AAGGCGTCCAGG ATATCTTTGACGCCC TERM 2082 1855582 - 1855596 + g 100 -4.2 -5.75342 | TATCTGCGTCTTCCA TGGGTT TGA GGCCCA TTTTTTTTGCCCGCA TERM 2083 1855911 - 1855897 - G 95 -11.4 -4.56597 | opp_overlap 1855906 GCCCGCTTGCAAAAA CGGCCA TTT TGGCCG GGCCTCCGATCATTT TERM 2084 1856503 - 1856482 - G 74 -4.3 -4.84527 | opp_overlap 1856495, overlap 1856483 CCCAGATATGAAAAA GGGACATGG CAAC CCCTGTCCA GTACAGGGTTTTGGT TERM 2085 1856495 - 1856511 + g 79 -8 -4.4078 | opp_overlap 1856483 1856482 1856509 AAGGGACATGGCAAC CCCTGT CCAGT ACAGGG TTTTGGTTAAACCCG HRM2_16150 1857680 - 1856676 - | putative TRAP-type transporter, periplasmic component (TAXI family protein) TERM 2086 1857228 - 1857242 + g 87 -7.2 -5.05782 | overlap 1857231 GGTGCCGCTACCCCT TTTTCC AAT GGAAAA TTTTTTCCCCTGGAT TERM 2087 1857419 - 1857438 + g 71 -5.7 -4.41633 | gap 1, overlap 1857423 CGTACAGGGATTGGA GGATGGCC ATGTG GGCC-TCC TTGTTTTTCAACATC TERM 2088 1857601 - 1857614 + g 83 -3.1 -5.47218 | gap 1 GCCAGGATCAGGCTT TC-GCC GGC GGCTGA TTTTTTTACCTGGAA TERM 2089 1857830 - 1857850 + H 100 -12.7 -3.97308 | opp_overlap 1857828 1857827 CGTTAATATAAATTT GTCAGATGT CGG ACATCTGAC TTTAAATTTTATAAT HRM2_16160 1857918 - 1859198 + | hypothetical protein HRM2_16170 1860373 - 1859306 - | ABC-type iron(III) transporter, periplasmic binding protein HRM2_16180 1861188 - 1860370 - | ABC-type iron(III) transporter, ATP-binding protein (ATPase) HRM2_16190 1862215 - 1861199 - | ABC-type iron(III) transporter, permease protein TERM 2090 1861511 - 1861525 + g 71 -11.4 -2.76686 | overlap 1861510 1861508 GATATTTACCCTTAT GCCCAG GGA CTGGGC CTCTTTGTCTCCCAT TERM 2091 1862112 - 1862098 - G 70 -2.8 -4.75063 | overlap 1862100 1862107 1862109 ACAAAAGGGCAAAAA TTTCTG AAA CAGATA TGGGATATCGGCCCA HRM2_16200 1864216 - 1862222 - | TonB-dependent outer membrane receptor HRM2_16210 1864357 - 1864515 + | hypothetical protein TERM 2092 1864512 - 1864493 - f 78 -4.2 -5.14698 | gap 1, overlap 1864495 AAAGGCAAAATAAAA CGCGGTCAG GCA CTG-CCGGG TAATCCATTTTTGCC phnD 1864612 - 1865499 + | PhnD TERM 2093 1865559 - 1865569 + G 71 -6.8 -4.2328 | TTTGCTGCTGCTCAT CCAG GGC CTGG TATTTTTCTTCTGGT TERM 2094 1865645 - 1865627 - g 74 -2.3 -5.06585 | TAAAGGAGATAAAAA CCCACGG CATTT CCATTGG CAAAAGTCTGTCTGC TERM 2095 1865674 - 1865690 + G 70 -2.2 -5.03314 | overlap 1865675 GCACGCATGGTGGAA CCCATG CTGGC CATGGA TTTTTTACGAATGCG HRM2_16230 1865503 - 1867491 + | sensory box histidine kinase/response regulator TERM 2096 1867660 - 1867675 + G 74 -7.6 -4.25104 | opp_overlap 1867659 1867662 TTCTGGAACGAAAGG GACACA CCGT TGTGTC TTTTACTGAAGAAGA TERM 2097 1867817 - 1867795 - g 100 -13.5 -5.59357 | ATGAGATGAAAAAAA GATCACCCG CCACC CGGGTGATC ATGCTCACAGGGTAT HRM2_16240 1867587 - 1867946 + | hypothetical protein HRM2_16250 1868994 - 1867972 - | putative protein phosphatase TERM 2098 1868694 - 1868726 + g 87 -4.2 -5.40474 | gap 2, overlap 1868696 TGATGAATGTGCCGG TTCTG--CCAATGCCG TGG CGGCAGTGGATCAGGA TTTTTTTACCCAGAT ppsA4 1871612 - 1869009 - | PpsA4 TERM 2099 1869270 - 1869254 - G 73 -10.9 -3.29144 | overlap 1869267 CCAGCCGGGTCAGAA CGCCTTT TAC AAAGGCG GCCCTTAACACCCGT TERM 2100 1870226 - 1870262 + g 70 -2.2 -4.92756 | gap 1, overlap 1870221 CAGCCCCCGACCCTG TGCCTGGGCACACGG TTTCACCC CCG-GCGCTGAGGCA TTTGTTTTTAATGGT HRM2_16270 1871806 - 1872507 + | putative membrane protein (selenocysteine containing membrane protein) TERM 2101 1873751 - 1873731 - g 82 -12.5 -3.40371 | CAGGTCATGAACCAA CTGGCCCTG CTG CTGGGCCAG TATCCGGGTACCCTT TERM 2102 1874134 - 1874121 - g 87 -8.1 -4.88228 | ATTGAATATGAAAAA GCGGT TCTC ACCGC CCTTAAAGATGTTGA HRM2_16280 1872888 - 1874429 + | RND efflux transporter, outer membrane lipoprotein TERM 2103 1874849 - 1874831 - g 74 -12.4 -2.76442 | overlap 1874828 1874833 ATGATCAGGTAACCA CAGGCCAG GTG CTGGCCCG GCTGGATACCGAGAA TERM 2104 1874847 - 1874833 - g 73 -11.4 -2.92668 | overlap 1874831 1874828 GATCAGGTAACCACA GGCCAG GTG CTGGCC CGGCTGGATACCGAG TERM 2105 1875678 - 1875663 - g 73 -5.4 -4.72272 | gap 1 CCTGGCCAGTAAAAA CCAG-CG AAG CGTCTGG ATCCTCAAAGAGGGA HRM2_16290 1874494 - 1875813 + | RND efflux transporter (HlyD family secretion protein) HRM2_16300 1875810 - 1876550 + | ABC-type transporter, ATP-binding protein (ATPase) HRM2_16310 1876547 - 1877752 + | ABC-type transporter, permease component TERM 2106 1878028 - 1878040 + G 75 -9.1 -3.95153 | GCGTTGTTTCATTTT CAGGC CTT GCCTG TTTCTGGATAATTGC TERM 2107 1878285 - 1878301 + G 76 -5.1 -4.77165 | TATTCGGCAAGCCAG TATCGTC CAT GGCGGTA TTTTCTTCTGGCCAC HRM2_16320 1877745 - 1878812 + | putative mechanosensitive small-conductance channel MscC trkA2 1879546 - 1878875 - | TrkA2 TERM 2108 1879151 - 1879171 + g 86 -8.9 -4.56775 | GTTGTGGAGACGTTC GGCCAGGGC CAG GGCCTGGTC TTTTTCCGGGAAAAT trkB 1880928 - 1879543 - | TrkB TERM 2109 1879883 - 1879903 + g 100 -8.2 -5.43866 | GTTTGTTCAGGGATG GCCCGGCC AAAGA GGTTGGGC TTTTTTTCGCCCTTG TERM 2110 1880331 - 1880321 - G 80 -3.2 -5.22794 | overlap 1880325 AGAATGATTAAAAAA CCGA TGG TCAG ATTGACGACAATGCT lysM2 1881970 - 1880945 - | LysM2 TERM 2111 1882551 - 1882541 - g 71 -6.8 -4.13561 | TCTGGGGAAAAAAGA GCTG GAA CAGC AAATTGCCTGGACAA HRM2_16360 1882146 - 1883525 + | metal dependent response regulator TERM 2112 1883697 - 1883721 + G 74 -4.9 -4.88293 | opp_overlap 1883699 GTCTGATTTTTTAAG CATCGTCAAGG TGA CCATGAAGGTG TTTCTTTTTAAAATT motA1 1883527 - 1884288 + | MotA1 TERM 2113 1885068 - 1885058 - g 76 -8.2 -4.26019 | TAATGATACGGAAAA GGGC AGG GCCC GGAATCGGCGGGTTG motB1 1884333 - 1885142 + | MotB1 TERM 2114 1885836 - 1885805 - g 72 -8 -3.90048 | gap 1 CTTTCCTGAAAAAGA TTCCCGAAC-AGGAG GCA CTCCTTGCCCGGGTA AAAAAAATGGAGACA ptsN1 1885189 - 1885875 + | PtsN1 TERM 2115 1886572 - 1886588 + G 83 -13.7 -3.22668 | overlap 1886570 1886587 GGGGTGGATCTGTTT GCCAGCC TGG GGCTGGC TGTTGTGGCGGCTTT TERM 2116 1886763 - 1886779 + G 79 -7.9 -4.56597 | CTATCATTCCATCCA CGCCATG ATC CAGGGCG TTTTTAAGGGGGGCA TERM 2117 1886791 - 1886814 + G 74 -2.2 -5.15634 | GGCGTTTTTAAGGGG GGCATCGGCA TTGC TGCCCTGGCC TTTTTTGCTAAGATA eriC1 1885885 - 1887615 + | EriC1 uspA12 1887624 - 1888454 + | UspA12 HRM2_16420 1888902 - 1888459 - | HTH-type transcriptional regulator (MarR family protein) TERM 2118 1888946 - 1888934 - R 86 -10.5 -3.90464 | TTTTAAATAATATAA CCGGC ATG GCCGG AGCAGGGTCTCTGCC TERM 2119 1888986 - 1889012 + r 72 -8 -3.83502 | opp_overlap 1888984 1888986 1888985, overlap 1888988 ACGAAATTTAAAACG TCTCCACGGG CGAAGTT CCCGTGGATA TTTCATCTAAAAATC TERM 2120 1888988 - 1889010 + r 80 -10.6 -3.5032 | opp_overlap 1888984 1888986 1888985, overlap 1888986 GAAATTTAAAACGTC TCCACGGG CGAAGTT CCCGTGGA TATTTCATCTAAAAA kamA3 1890445 - 1889123 - | KamA3 TERM 2121 1889292 - 1889305 + g 83 -5.3 -5.20534 | opp_overlap 1889292, overlap 1889299 CTTGCCTGCACAAAG GTCAT GGCA ATGAC TTTTTGTTCATTGAT TERM 2122 1890544 - 1890598 + r 95 -4.8 -5.82316 | gap 1, overlap 1890546 TTGGGGTGGAATTTC TATTGTATCCAAACTATCTT-AT AATAAGTAAC ATGAAAATAGTTTGGATACAATG TTTTTTTTAAATGGT TERM 2123 1890546 - 1890596 + r 70 -5.2 -4.5536 | gap 1, overlap 1890544 GGGGTGGAATTTCTA TTGTATCCAAACTATCTT-AT AATAAGTAAC ATGAAAATAGTTTGGATACAA TGTTTTTTTTAAATG HRM2_16440 1891085 - 1890654 - | hypothetical protein recR 1891674 - 1891075 - | RecR TERM 2124 1891166 - 1891182 + g 83 -2.9 -5.43866 | overlap 1891167 1891177 ACGCCTGAAGCGATT CGTGTCA CAT TGACGCC TTTTTTTCGGAGTTG TERM 2125 1891177 - 1891215 + g 71 -10.3 -3.09803 | opp_overlap 1891211, overlap 1891167 1891166 GATTCGTGTCACATT GACGCCTTTTTTTCGGA GTTGG TCCGAAATATAGGCGGC TGTTGCCTCGCCTTC TERM 2126 1891502 - 1891492 - G 71 -6.8 -4.18018 | GTCGCTCAGGGAAAA GCAG GTC CTGC AAAGCGTCACCTTTT HRM2_16460 1891982 - 1891680 - | hypothetical protein TERM 2127 1891892 - 1891906 + g 74 -7.8 -4.25283 | overlap 1891897 CCATGCCACCGCCTG CTGTGG CTT CCACGG TTTTGGTGGCAAGCT dnaX 1893760 - 1891988 - | DnaX HRM2_16490 1894554 - 1893898 - | SAM-dependent methyltransferase TERM 2128 1894320 - 1894339 + g 79 -5 -4.92363 | overlap 1894323 CCGACAATAGAATGG TGACCTGA TCCG TCAGGTGA TTTTTCTGGATGTTT HRM2_16500 1894885 - 1894580 - | hypothetical protein acsM3 1896600 - 1894954 - | AcsM3 TERM 2129 1896409 - 1896353 - G 95 -11.8 -4.21933 | gap 2, opp_overlap 1896357 1896360, overlap 1896360 1896364 GGAACGGCAAAATAA CACTCAAGAT-AC-CGGTGGCTGTCATA ATC CATGACAGCCACCGTGTCACCCTGTTTG ACGCCGAGCCCTTTA TERM 2130 1896357 - 1896405 + g 77 -10.5 -3.53012 | gap 2, opp_overlap 1896353 1896360 1896364, overlap 1896360 CGGCAAAATAACACT CAAGAT-AC-CGGTGGCTGTCAT AATCC ATGACAGCCACCGTGTCACCCTG TTTGACGCCGAGCCC TERM 2131 1896399 - 1896360 - G 90 -15.2 -3.28217 | gap 1, opp_overlap 1896360 1896357, overlap 1896353 1896364 CAAAATAACACTCAA GATACCGGTGGCTGTCATA ATC CATGACAGCCACC-GTGTC ACCCTGTTTGACGCC TERM 2132 1896396 - 1896364 - G 100 -17.1 -3.14002 | opp_overlap 1896360 1896357, overlap 1896360 1896353 ATAACACTCAAGATA CCGGTGGCTGTCATA ATC CATGACAGCCACCGT GTCACCCTGTTTGAC HRM2_16520 1897005 - 1896637 - | NADP-reducing hydrogenase, subunit B HRM2_16530 1897548 - 1897015 - | sensory signal transduction histidine kinase (ATPase domain protein) HRM2_16540 1898229 - 1897552 - | metal-dependent phosphoesterase (PHP family protein) TERM 2133 1897833 - 1897855 + g 81 -13.4 -3.1552 | overlap 1897831 TGGTTCGGTCAATGT GGGCGGCAAT GGC AATGCCGCCC TGTTGGTGGATGAGA TERM 2134 1898024 - 1898042 + g 83 -8.8 -4.42386 | opp_overlap 1898013, overlap 1898015 1898016 ACAACCGCTGCCACG GCTTCTGC CTG GCAGATGC TTTTGTGGATGCCCA TERM 2135 1898331 - 1898315 - R 78 -10.1 -3.57263 | overlap 1898316 ACGGGCACGGTTAAA CGCCCTG GAG CAGGGCA AGACGCGTGGCAAGG TERM 2136 1898330 - 1898316 - R 81 -11.4 -2.74144 | overlap 1898315 CGGGCACGGTTAAAC GCCCTG GAG CAGGGC AAGACGCGTGGCAAG HRM2_16550 1899956 - 1898310 - | iron-sulfur binding hydrogenase rsbW2 1900384 - 1899953 - | RsbW2 HRM2_16570 1900750 - 1900397 - | hypothetical protein TERM 2137 1900714 - 1900734 + g 72 -8.3 -3.87815 | opp_overlap 1900714 1900713 1900716 GGCCGAAAAGAAATC TAGCCTTGA GTA TCATGGCTA TTTCTGAGAGTAACA TERM 2138 1901141 - 1901177 + G 77 -11.4 -3.40775 | overlap 1901140 TCTGAGTGATTTCAT GGCCATGGCCGGCCCC AACAC GCCGCCGGTCTTGGCC TATTTCCATGAAAAT TERM 2139 1901517 - 1901507 - g 70 -2.4 -4.93296 | GGAGTATGATAAAAA GCCG GAA CGGT TTTTCAGGGCTCTTG HRM2_16580 1900917 - 1902032 + | putative glycosyltransferase nuoE 1902140 - 1902634 + | NuoE nuoF 1902656 - 1904443 + | NuoF TERM 2140 1904762 - 1904780 + G 86 -5.2 -5.24129 | overlap 1904754 1904764 AAAATTTCCGGGTCT AACGGGAC CTG GTCCTGTC TTTTTTATGACAAAG TERM 2141 1904764 - 1904778 + G 74 -7.8 -4.25873 | overlap 1904754 1904762 AATTTCCGGGTCTAA CGGGAC CTG GTCCTG TCTTTTTTATGACAA HRM2_16610 1904513 - 1905211 + | hypothetical protein cooC 1906050 - 1905268 - | CooC TERM 2142 1905396 - 1905375 - G 76 -8.1 -4.18018 | TGTCTGCACTGAAAA TTTCTTCCA TCTC CGGAAGAAA TCCAATGATTTCAAA HRM2_16630 1906382 - 1906074 - | hypothetical protein TERM 2143 1906520 - 1906493 - R 100 -21.4 -6.08563 | opp_overlap 1906479 1906493 AACAGATAAAAAAAA CCCCTTCACGGC CATG GCCGTGAAGGGG TTTCAGGTCTGATTT TERM 2144 1906493 - 1906520 + r 100 -21.4 -3.65714 | opp_overlap 1906493, overlap 1906479 AACAGATAAAAAAAA CCCCTTCACGGC CATG GCCGTGAAGGGG TTTCAGGTCTGATTT metH3 1907452 - 1906547 - | MetH3 TERM 2145 1907273 - 1907284 + g 76 -4.4 -5.02074 | CACCCATGGCATGAG TTCG GTGC CGAA TTTTTTGGCGGGTCC TERM 2146 1907493 - 1907544 + r 79 -6.6 -4.6313 | opp_overlap 1907505 1907510, overlap 1907504 1907510 GAGTTGATCTACACA TGAATTGTAACATCAAAGGGACGG TTGG CCGTCCCTTTGACATTGATAGTCA TTATTTTGTTTTAAG TERM 2147 1907504 - 1907533 + r 100 -15.1 -2.54955 | opp_overlap 1907505 1907510, overlap 1907493 1907510 CACATGAATTGTAAC ATCAAAGGGACGG TTGG CCGTCCCTTTGAC ATTGATAGTCATTAT TERM 2148 1907532 - 1907505 - R 100 -18.6 -3.10732 | opp_overlap 1907504 1907493 1907510, overlap 1907510 ACATGAATTGTAACA TCAAAGGGACGG TTGG CCGTCCCTTTGA CATTGATAGTCATTA TERM 2149 1907527 - 1907510 - R 100 -12.7 -3.9344 | opp_overlap 1907510 1907504 1907493, overlap 1907505 AATTGTAACATCAAA GGGACGG TTGG CCGTCCC TTTGACATTGATAGT TERM 2150 1907510 - 1907527 + r 100 -12.7 -3.68244 | opp_overlap 1907505 1907510, overlap 1907504 1907493 AATTGTAACATCAAA GGGACGG TTGG CCGTCCC TTTGACATTGATAGT cdhE 1908885 - 1907545 - | CdhE TERM 2151 1908439 - 1908463 + g 75 -10.8 -3.40775 | overlap 1908437 AGAGGTATCGGCAAT GGTCTTTGCA CAGGT TGCAAAGGCC TCTTTGCCTGCACCT TERM 2152 1908910 - 1908958 + r 73 -6 -4.42788 | opp_overlap 1908919, overlap 1908911 TCGTCTATTTTTTAA GGTGACAGACCCTTGGCA AAGGTTCTGGTGC TGCCCAGGGGCTGTCACA TTTTATAGGATTAAA TERM 2153 1908911 - 1908957 + r 74 -9.5 -3.25191 | opp_overlap 1908919, overlap 1908910 CGTCTATTTTTTAAG GTGACAGACCCTTGGCA AAGGTTCTGGTGC TGCCCAGGGGCTGTCAC ATTTTATAGGATTAA cdhC 1911189 - 1908976 - | CdhC TERM 2154 1910975 - 1910994 + g 100 -9.2 -5.27399 | opp_overlap 1910973 TGGGGGGGAAGCAGT CCCCTGGC AAAG GCAAGGGG TTTTTTGATGTCTTC cdhA 1913295 - 1911259 - | CdhA TERM 2155 1913267 - 1913277 + g 95 -5.4 -5.68023 | GCCTTTTCTGCTTTG GCAA CTT TTGC TTTTTTTGCTTCTGC HRM2_16680 1913818 - 1913363 - | hypothetical protein TERM 2156 1913550 - 1913569 + g 74 -4.2 -4.8622 | overlap 1913548 1913548 1913551 TCAGCCTCAAGTTTA GCAGCAGC AGCT GTTACTGC TTTTTCCTTGGCAGC cdhD 1915137 - 1913836 - | CdhD TERM 2157 1915252 - 1915237 - H 100 -4 -5.9362 | gap 1 CAAAAGACAAAAAAA CGAAACC TGT GGTT-CG GTGTGGAACGGCAGC TERM 2158 1915805 - 1915791 - g 73 -5.7 -4.59109 | GAGATTGGCGAAAAA CTTGG ACTGA CCAAG GAGGAGCTACTTCCC fhs 1915701 - 1917476 + | Fhs TERM 2159 1917523 - 1917492 - T 100 -14.4 -4.05446 | TGTTTTAACCATAAA GGGAGGCTGGGACC AGAA GTTCACAGCCTCCC CCTTGCCGTGCAGCA TERM 2160 1917579 - 1917551 - T 100 -21.9 -5.2189 | opp_overlap 1917551 GCAATTATGAAAAAA TGGCGTAGGGGTT GAA AACCCCTACGCCA TTTTTAGTTGTTTGC TERM 2161 1917551 - 1917579 + T 100 -21.9 -5.04356 | opp_overlap 1917551 GCAATTATGAAAAAA TGGCGTAGGGGTT GAA AACCCCTACGCCA TTTTTAGTTGTTTGC folD 1918491 - 1917631 - | FolD TERM 2162 1917781 - 1917822 + g 93 -8.7 -5.0133 | overlap 1917771 1917781 ATACTTGCCGGGTCT GTCAGGGTCGGCATTGATG CCGA CATCAATGACGATCTGGCC TTTTTTGACAAAGTC TERM 2163 1917781 - 1917821 + g 77 -10.6 -3.60316 | gap 1, overlap 1917771 1917781 ATACTTGCCGGGTCT GTCAGGGTCGGCATTGATG CCGA CATCAATGACGATC-TGGC CTTTTTTGACAAAGT fchA 1919137 - 1918505 - | FchA TERM 2164 1919244 - 1919254 + H 84 -5.4 -5.25699 | TTTAATATACTCAAT TGGT TAT ACCA TTTTTGTTCTCTACT metF1 1919587 - 1920468 + | MetF1 HRM2_16740 1920489 - 1920938 + | predicted iron-sulfur cluster assembly protein (NifU like protein) HRM2_16750 1920938 - 1921156 + | hypothetical protein TERM 2165 1921399 - 1921389 - g 79 -6.8 -4.74132 | opp_overlap 1921389, overlap 1921375 1921390 AGATTTCATGAAAAA TCCC CAG GGGA TTCCTTCGGGCATGG acsF 1921189 - 1921974 + | AcsF TERM 2166 1922407 - 1922438 + G 71 -10.2 -3.14807 | opp_overlap 1922406, overlap 1922405 1922401 1922397 1922409 CTCCCTGAATGCAAG CTTTTCCAGCCG GATGCCGA CGGCTGGAAATG TGTCATTTATTTCCC TERM 2167 1922409 - 1922436 + G 74 -11.4 -3.12261 | opp_overlap 1922406, overlap 1922407 1922405 1922401 1922397 CCCTGAATGCAAGCT TTTCCAGCCG GATGCCGA CGGCTGGAAA TGTGTCATTTATTTC sucD3 1921967 - 1924093 + | SucD3 TERM 2168 1924186 - 1924224 + F 100 -12.7 -4.3586 | opp_overlap 1924193 1924205 TTCATCTACACGGCG CATTAAAGGTTCAATAG CAGGC CTATTGGGCCTTTGATG TTTTGATGTAGATGG TERM 2169 1924350 - 1924338 - g 100 -10.5 -4.93365 | TTTTACAATGAAAAA CGGCC AGG GGCCG TCAGGTAAGGGCAAA HRM2_16780 1924306 - 1924614 + | hypothetical protein TERM 2170 1925028 - 1925041 + G 84 -2.3 -5.64274 | ATGGGGCTCAAGCTG GGAAC AGAT GTGCC TTTTTTTATCCATGG TERM 2171 1925410 - 1925436 + G 80 -11.7 -3.48276 | overlap 1925417 CGCTTTTTTCCGATG GCTTAAAGGCT CAGCA GGCCTTTAAGC TTCTGTCGGAAACAA ispE 1924611 - 1925516 + | IspE TERM 2172 1925902 - 1925929 + G 71 -5.6 -4.51174 | ATTCAGTCCACCTGC GCTCCGGTAAAT GATA ATTTGATGGAGC TTTTACTTATGGTGG prsA2 1925722 - 1926660 + | PrsA2 TERM 2173 1926773 - 1926760 - g 74 -8.1 -4.11394 | overlap 1926747 AGGGCAGGGGCAAAA GTGCC GCCC GGCAC CTTAGAAATAATGAC rplY 1926711 - 1927361 + | RplY TERM 2174 1927396 - 1927441 + G 91 -16.4 -2.68799 | gap 2, opp_overlap 1927412, overlap 1927391 ATCAGATTTTCATGG TGGCGGGTCTGGG-A-AATCCC GGTA GGAATTATGCCCAGACCCGCCA TAATATCGGTTTCCT pth 1927371 - 1927952 + | Pth TERM 2175 1927955 - 1927972 + F 86 -2.6 -5.89659 | TGCCCGTGATTAGTC CCCATG ATCAAA CAAGGG TTTTTCTTTTTTTGT HRM2_16840 1928147 - 1928608 + | transcriptional regulator (CarD family protein) TERM 2176 1928646 - 1928675 + F 100 -13 -5.8187 | opp_overlap 1928659 AGGCCATAAATTTCA GACCGATAGGCA ATCCGA TGTCTATCGGTC TTTTTTTATTCCGTG TERM 2177 1928871 - 1928860 - g 100 -7.2 -5.53288 | opp_overlap 1928860 1928864 GGCAATCGAAAAAAA CCGG CCTA CCGG GTAAAACCGGGTGAG TERM 2178 1929381 - 1929391 + G 71 -6.8 -4.2349 | opp_overlap 1929378 CCTGGGACAAATGGC GGGT CAC ACCC TTTTGGATGTGGGAC rluD1 1928713 - 1929654 + | RluD1 TERM 2179 1929633 - 1929644 + T 75 -2.2 -5.37345 | opp_overlap 1929630, overlap 1929630 TGAACGGCTAAACCG GGGA CCGC TCTC TTTTTTGTGATTCGG HRM2_16860 1930128 - 1929697 - | hypothetical protein TERM 2180 1930160 - 1930178 + H 76 -6.6 -4.52589 | TTAATTGTTTGATTC CCTGGGTG ATG CTTCCAGG TTTTGTGTAAGCGAA TERM 2181 1930971 - 1930988 + G 70 -4.9 -4.69622 | gap 1, opp_overlap 1930971 1930975, overlap 1930946 1930985 CATGGAGACGGGAAA TCCACTGA TTG TCAG-GGA TTTTTCCCGTTGTAT TERM 2182 1932132 - 1932120 - g 75 -9.1 -3.90744 | CTGCGGGCGAAATAA CGTGG TCT CCACG GCCAATCTCCAGATG TERM 2183 1932520 - 1932500 - g 77 -9 -4.05788 | opp_overlap 1932500 TCTTTTTAAACGAAA CCACACGG TTTGC CCATGTGG TGTTGCCGGCAGCAG fdhA5 1930486 - 1933251 + | FdhA5 TERM 2184 1933884 - 1933864 - g 72 -9.7 -3.39803 | opp_overlap 1933861 1933877 CACCCAGATTTACAA GGATCAGCC CGT GTCTGATCC CGGTATCTGGAATCA TERM 2185 1933913 - 1933924 + G 87 -7.2 -4.95618 | CAGCTTGAGTACCGG CCCC TTGA GGGG TTTGTTTTTGCTGTT TERM 2186 1934555 - 1934542 - g 74 -3.8 -5.02074 | overlap 1934545 TGATTTTGCAAAAAA CAGC GACCAT GCTG AGATCATTGCCGGCG putA2 1933382 - 1935007 + | PutA2 TERM 2187 1935014 - 1935058 + T 100 -15.2 -2.9348 | opp_overlap 1935009 ATGGGCTAAAGCCGT GGGGCCCCTTACTTAATTTT CCAAA AGAAATAAATAAGGGGCCCC TGTCTAAAATTTCAG fdhA6 1937853 - 1935088 - | FdhA6 TERM 2188 1935527 - 1935574 + g 73 -6.2 -4.5366 | gap 1 TTGGTGTGCAGTATC GGAGTGCCTGGATGGGCCTCTGT GGG ACAG-GGCCAGTGTATGCCCTCC TTTTCAATTTTTTCA TERM 2189 1935822 - 1935836 + g 70 -9.2 -3.64703 | opp_overlap 1935806 1935800, overlap 1935806 CCGGCAGGACCACGT CGGCCT TTT GGGCCG TTTCCGTGAGGAAAA TERM 2190 1936837 - 1936849 + g 76 -5.5 -4.84527 | AACCCCGATGCTGTC CGATC CAT GGTCG TTTTTGATCTGTGCC HRM2_16900 1938049 - 1940118 + | FAD-dependent oxidoreductase (4Fe-4S ferredoxin cluster binding protein) TERM 2191 1941634 - 1941652 + G 87 -7.4 -4.99035 | opp_overlap 1941634 TTTTAAGCAAAAAGG GCGAGGGA TCA TCCTTTGC TTTTTATCTGCCTGC HRM2_16910 1940157 - 1942100 + | sensory box histidine kinase/response regulator TERM 2192 1942094 - 1942079 - T 84 -6.1 -5.04249 | TTCTGAAAAAATAAA CAGGG TGTGTG CCCTG GGATAGAGAACAGCC TERM 2193 1942112 - 1942162 + T 93 -13.5 -2.82623 | gap 1, opp_overlap 1942123, overlap 1942117 1942121 1942130 ATAGAGAACAGCCTC TAAAACAAGAAGAGCCCGGAAAAG ATTT CTTTTCCGGGCTCC-CATGTTTAA TGCTTATGCAAAGGC TERM 2194 1942117 - 1942157 + T 100 -13.4 -3.86944 | gap 1, opp_overlap 1942123, overlap 1942112 1942121 1942130 GAACAGCCTCTAAAA CAAGAAGAGCCCGGAAAAG ATTT CTTTTCCGGGCTCC-CATG TTTAATGCTTATGCA TERM 2195 1942121 - 1942154 + T 95 -13.9 -2.70353 | opp_overlap 1942123, overlap 1942117 1942112 1942130 AGCCTCTAAAACAAG AAGAGCCCGGAAAAG ATTT CTTTTCCGGGCTCCC ATGTTTAATGCTTAT TERM 2196 1942152 - 1942123 - T 100 -20.9 -4.20868 | opp_overlap 1942121 1942117 1942112 1942130 CCTCTAAAACAAGAA GAGCCCGGAAAAG ATTT CTTTTCCGGGCTC CCATGTTTAATGCTT TERM 2197 1942184 - 1942201 + T 74 -4.1 -5.03715 | overlap 1942186 TGCAAAGGCTTTCTC AAGGTTG GGAA CAACCTG TTTTTTACGGCTCAT TERM 2198 1942186 - 1942199 + T 71 -6.7 -4.14633 | overlap 1942184 CAAAGGCTTTCTCAA GGTTG GGAA CAACC TGTTTTTTACGGCTC ppaC 1943086 - 1942166 - | PpaC TERM 2199 1942587 - 1942603 + g 78 -2.1 -5.252 | ATCCCGGCAGCTTTG GCAAGGG CTT CACATGC TTTTTTGTCGGCGTC HRM2_16930 1943321 - 1943653 + | hypothetical protein TERM 2200 1944636 - 1944622 - g 84 -4.2 -5.27779 | opp_overlap 1944622 1944624, overlap 1944624 TTGAATATCAAAAAA GGTGAC ACC GTCATC CTCTCTTCAAAATCC HRM2_16940 1943671 - 1945320 + | hydrolase (metallo-beta-lactamase superfamily) TERM 2201 1946552 - 1946568 + G 73 -12.3 -2.64759 | opp_overlap 1946546, overlap 1946551 1946549 TTCGTCAAAGCTGAC CCTTGCC CTT GGCAAGG ATATTCTTGGCGTTC ftsK1 1945317 - 1947611 + | FtsK1 TERM 2202 1948128 - 1948114 - g 72 -8.5 -3.93288 | TTTGATCCAACCAAA GGGGG ACAGG CCCCC CGAAAAATCTATGAA HRM2_16960 1947601 - 1948215 + | hypothetical protein HRM2_16970 1948310 - 1948663 + | HTH-type transcriptional regulator (ArsR family protein) TERM 2203 1948666 - 1948679 + F 91 -3.8 -5.75945 | TGTGATGGAGTAGGA GCAG TTCAGT CTGC TTTTTTTTGGCAAAT TERM 2204 1949696 - 1949686 - g 70 -2.4 -5.0133 | opp_overlap 1949686 GATTCTTGGAAAAAA GGCC ACG GGCA TCTATCTTGGCGCCA HRM2_16980 1948703 - 1949926 + | putative permease TERM 2205 1950257 - 1950269 + F 86 -10.5 -3.86346 | AGCCGATACTTCGCT CCGGC CGT GCCGG TTTATAAGAAACTCA TERM 2206 1950756 - 1950774 + F 75 -2.4 -5.26119 | ATAGCCAACTACCGC TTGCAATT TTT AGGTGCAA TTTTCTTTTTCAGGG TERM 2207 1951327 - 1951316 - g 79 -7.2 -4.59109 | TACATCTGGGAAAAA CCCG GCGC CGGG GATGTGTCCAAGCTA mcpA3 1950851 - 1952575 + | McpA3 HRM2_17000 1953368 - 1952652 - | putative methyltransferase TERM 2208 1953010 - 1953026 + g 70 -9.3 -3.5393 | CTTGGTACACTTACC CCCAGGG TTC CCCCGGG TTTGAGCACCCTGAT HRM2_17010 1954618 - 1953365 - | putative glycosyltransferase folC 1956180 - 1954738 - | FolC TERM 2209 1955153 - 1955165 + g 79 -6.9 -4.62069 | overlap 1955163 ATGGTTTCCAGGCGA CCCGG CCA CTGGG TTTTTGAAATACCCC TERM 2210 1955454 - 1955471 + g 76 -6.9 -4.58213 | overlap 1955445 1955456 CATTCTCCTGGTTGA CGCCGGT GACA ACCGGGG TTTTGTGCTTGATTA TERM 2211 1956201 - 1956169 - G 100 -12.8 -4.82901 | gap 1, opp_overlap 1956169 1956197 GGTTCTGTAGAAAAA CCCGACAGACATGTG AGGT CAC-TGCCTGCCGGG TTCCTGGTTGATCAC TERM 2212 1956237 - 1956221 - R 72 -7.9 -3.78775 | opp_overlap 1956223, overlap 1956222 TGGTTGATCACTAAA GCGGCTG CTT CAGCAGC CTTCCTTTAATGTTT TERM 2213 1956223 - 1956238 + r 82 -10.4 -3.63195 | opp_overlap 1956221 1956222 GTTGATCACTAAAGC GGCTGC TTCA GCAGCC TTCCTTTAATGTTTC HRM2_17040 1956339 - 1956244 - | hypothetical protein TERM 2214 1956462 - 1956476 + r 86 -5.6 -5.36018 | TCGCCCCTTTCTTGC CCACCG TAA CGATGG TTTATTTTTTTTAAT adk 1957243 - 1956569 - | Adk TERM 2215 1956638 - 1956649 + g 87 -4.4 -5.41143 | CAGGGTGATGTATTT GATG GAGT CATC TTTTTTTGCAAGATC rho2 1957695 - 1958942 + | Rho2 rpmE 1958982 - 1959209 + | RpmE TERM 2216 1959230 - 1959262 + GF 100 -19.9 -4.35524 | opp_overlap 1959227 TTTTTTTAAAATTCG GGGGAGGTTGGGCAC CAT GTGCCCGGCTTCCCC TTTTGGATTTGCAGA TERM 2217 1959866 - 1959886 + GF 78 -10.3 -3.28712 | AGGGACGGGTTCACA CGTCGGCCG TGA CGGTCGCCG TTCTGCCCGAGGCAG prfA 1959169 - 1960344 + | PrfA hemK 1960348 - 1961235 + | HemK rpsB 1961407 - 1962249 + | RpsB TERM 2218 1962422 - 1962408 - g 100 -10 -5.0133 | overlap 1962420 CACCTTCGTAAAAAA GGCCTT GCA AAGGCC CAGAAAAGGGCTGGC tsf 1962276 - 1962872 + | Tsf pyrH 1962875 - 1963597 + | PyrH frr 1963621 - 1964178 + | Frr TERM 2219 1964280 - 1964267 - gf 100 -6.7 -5.40072 | overlap 1964278 CGCTGGGCAAAAAAA CGGTT CATG AACCG TGTCAACGGCCATCA TERM 2220 1964656 - 1964644 - gf 70 -7.7 -3.61178 | TCGAGCGATTGTAAA TGAGG TCT CCTCA GGTGGGCTTTCAGTC uppS 1964168 - 1964935 + | UppS TERM 2221 1965652 - 1965667 + GF 93 -9 -4.42748 | CACGGCGGGATACTT GACCGT ATCG ACGGTC TTATTTTTGCCCTGC cdsA 1964905 - 1965714 + | CdsA dxr 1965725 - 1966876 + | Dxr TERM 2222 1967522 - 1967510 - g 70 -3.3 -4.77157 | TGAATCCATCAAAAA GCCCA TGA TCGGC ATCTCATCGGCAGGC TERM 2223 1967731 - 1967695 - g 77 -10.8 -3.56092 | gap 1, opp_overlap 1967723, overlap 1967696 TCATGATCGCCCAAA TGGCTGGCCA-GCAGGC CGAA GCCGGCATGGCCAACCT GGCCTTCTTTATTGC TERM 2224 1967730 - 1967696 - g 82 -14.3 -2.73441 | gap 1, opp_overlap 1967723, overlap 1967695 CATGATCGCCCAAAT GGCTGGCCA-GCAGGC CGAA GCCGGCATGGCCAACC TGGCCTTCTTTATTG TERM 2225 1967723 - 1967735 + G 79 -9.1 -4.21438 | opp_overlap 1967696 1967695 GGCCGAAGCCGGCAT GGCCA ACC TGGCC TTCTTTATTGCCATG HRM2_17170 1966890 - 1967960 + | membrane-associated zinc metalloprotease TERM 2226 1970499 - 1970485 - g 72 -10 -3.36581 | GAAACGTTGAATGAA CTCGGA GCG TCCGAG TACTACGAGCTTTGC purL 1967962 - 1970967 + | PurL TERM 2227 1971073 - 1971100 + G 71 -10.6 -3.04322 | opp_overlap 1971077, overlap 1971077 CCCAGCGGGTTCACA TCAACGCCCTGG TCAA CCAGCGTGTTGA TCTTGACGGATTCCA purQ 1970967 - 1971788 + | PurQ HRM2_17200 1971791 - 1972405 + | phage-related replication protein HRM2_17210 1972655 - 1973257 + | hypothetical protein HRM2_17220 1973297 - 1973722 + | putative acetyltransferase TERM 2228 1973751 - 1973739 - f 100 -10.5 -4.44211 | CGGAATATAAAATAA CCGGC ATG GCCGG AACATGGTATCTGCC TERM 2229 1974557 - 1974597 + G 77 -11.8 -3.08798 | gap 1, opp_overlap 1974553 1974556 1974554 1974557 TCACCGAAAAATGAG CTGGCCCAGGATGCCCGGG TGAC CCTTGGCATCC-GGGCAGG TGTTCGATCGGCCAT TERM 2230 1977973 - 1977955 - g 70 -9.6 -3.29461 | opp_overlap 1977946 1977966, overlap 1977963 1977964 GAACGGTCGGGACAA GGTGACAA CCG TTGCCACC TATGGCTCCATTGAT HRM2_17230 1973861 - 1979674 + | hypothetical protein TERM 2231 1980717 - 1980699 - g 73 -3 -4.91109 | opp_overlap 1980699 GGTCGATCACAAAAA CCGGGGAA TTC TTGCCTGG GTTTGTGTGGGTGGG HRM2_17240 1979671 - 1981953 + | penicillin binding family protein TERM 2232 1983730 - 1983714 - g 74 -6.5 -4.37092 | ATCTGTTGGACAAAA CCCTGGA ACT TGCAGGG TCGGATTATGACTTA TERM 2233 1983887 - 1983915 + G 100 -11 -5.27023 | gap 1, opp_overlap 1983888 1983889, overlap 1983888 1983888 GCCATGCAGGAAAGA AG-GGGCACCCCT AATC AGGGGTGCCCACG TTTTATTTTTCGACT TERM 2234 1983888 - 1983914 + G 93 -14.5 -3.74587 | gap 1, opp_overlap 1983888 1983889, overlap 1983887 1983888 CCATGCAGGAAAGAA G-GGGCACCCCT AATC AGGGGTGCCCAC GTTTTATTTTTCGAC TERM 2235 1983888 - 1983913 + G 84 -14.7 -2.83668 | opp_overlap 1983888 1983889, overlap 1983888 1983887 CCATGCAGGAAAGAA GGGGCACCCCT AATC AGGGGTGCCCA CGTTTTATTTTTCGA TERM 2236 1983913 - 1983888 - g 100 -14.7 -4.015 | opp_overlap 1983888 1983888 1983887, overlap 1983889 CCATGCAGGAAAGAA GGGGCACCCCT AATC AGGGGTGCCCA CGTTTTATTTTTCGA TERM 2237 1983912 - 1983889 - g 100 -18.2 -3.00418 | opp_overlap 1983888 1983888 1983887, overlap 1983888 CATGCAGGAAAGAAG GGGCACCCCT AATC AGGGGTGCCC ACGTTTTATTTTTCG HRM2_17250 1982537 - 1984171 + | sensory box histidine kinase TERM 2238 1984610 - 1984589 - f 75 -3.1 -5.0925 | gap 1, overlap 1984592 1984594 TGCCAAAATGAAAAA CAATACATTG AGG CAATGCAT-G AAAGAATTACCAGAA TERM 2239 1984608 - 1984592 - f 75 -5.9 -4.62313 | overlap 1984589 1984594 CAAAATGAAAAACAA TACATTG AGG CAATGCA TGAAAGAATTACCAG HRM2_17260 1984608 - 1986284 + | transposase (IS4 family protein) HRM2_17270 1986633 - 1986319 - | hypothetical protein TERM 2240 1987842 - 1987830 - g 84 -4.8 -5.24129 | opp_overlap 1987830 CCCTGTGATAAAAAA CGAG GATGG CTCG CCTTTTTATCAACAG HRM2_17280 1986903 - 1988282 + | transposase (IS4 family protein) HRM2_17290 1988531 - 1988298 - | hypothetical protein TERM 2241 1988760 - 1988774 + r 89 -3.6 -5.59564 | overlap 1988762 AAATGTAACATAAAG TTCATA GAA TATGGA TTTTTTTGGCTTTAT TERM 2242 1988865 - 1988877 + r 100 -10.5 -4.53303 | GGCAGATCCCCCGCT CCGGC CGT GCCGG TTTTATATGAAACTC TERM 2243 1989130 - 1989151 + r 75 -5.9 -4.66833 | ATATAAATACGCATC GACATTGCA TGCC TGCAATCTC TTTTTGGCGTTGAGC HRM2_17300 1989618 - 1989415 - | hypothetical protein TERM 2244 1989447 - 1989459 + g 100 -4.7 -6.23209 | opp_overlap 1989447 ATGGTCGGCATTGAA GGCCG TGG CGTCC TTTTTTTTTAGTTCC TERM 2245 1989964 - 1989978 + G 74 -2.1 -5.08824 | overlap 1989954 GTGGTCCCTGCCCAA GCTTT TGGCC AGAGC TTTTTTGAATGGCGG endA1 1989673 - 1990422 + | EndA1 TERM 2246 1990509 - 1990482 - f 100 -10.6 -5.4505 | opp_overlap 1990482 CCTTCTAACAAAAAA GGCCCTCAACGA AAAA TCGCTGAAAGCC TTGATTTTAAAGTGG HRM2_17320 1990732 - 1991886 + | tyrosine recombinase XerD TERM 2247 1992296 - 1992306 + G 83 -5.4 -5.14563 | opp_overlap 1992296 TATGCTCAGAAACAA GCAT CAA ATGC TTTTTTAATAAAACC HRM2_17330 1991876 - 1992769 + | hypothetical protein TERM 2248 1992796 - 1992825 + F 100 -7.3 -5.61881 | opp_overlap 1992796 ATCCTATCCATTAGA GGTTGTTTGTT TTTATCGT AACAAACAGCC TTTTTCTTTTTAAAG TERM 2249 1992891 - 1992908 + F 70 -7.7 -3.57651 | CGCTAAAATATATTT GTTCGGT AGTT GCCGAAC TTCTATAATATGCCG HRM2_17340 1993011 - 1993226 + | hypothetical protein TERM 2250 1993316 - 1993288 - f 86 -2.9 -5.78622 | GCAGGTGAAAAAAAA GGCCCGAAACC TGAACGG GGAGACGGGCC AAAGGGTGGAACTAA HRM2_17350 1993336 - 1995858 + | hypothetical protein HRM2_17360 1995861 - 1996187 + | hypothetical protein TERM 2251 1996345 - 1996310 - f 82 -6.8 -4.79683 | gap 1, overlap 1996311 1996312 AAGGGATAAAACAAA CCGGCCGG-AAAAGGGT TGC ACCCCTTGACCGGCCAT GTACCACAAAAAAAA TERM 2252 1996344 - 1996311 - f 80 -10.3 -3.46183 | gap 1, overlap 1996310 1996312 AGGGATAAAACAAAC CGGCCGG-AAAAGGGT TGC ACCCCTTGACCGGCCA TGTACCACAAAAAAA TERM 2253 1996343 - 1996312 - f 80 -11.6 -2.66625 | gap 1, overlap 1996311 1996310 GGGATAAAACAAACC GGCCGG-AAAAGGGT TGC ACCCCTTGACCGGCC ATGTACCACAAAAAA HRM2_17370 1996376 - 1997080 + | hypothetical protein HRM2_17380 1997839 - 1998213 + | hypothetical protein HRM2_17390 1998844 - 1998695 - | hypothetical protein TERM 2254 1998875 - 1998887 + H 70 -7.7 -3.57615 | opp_overlap 1998875 GGTAGCATTACGACA GCGTT CAA AACGC TTTGGCGGGTGTTGA TERM 2255 1999237 - 1999253 + H 100 -12.3 -3.84451 | opp_overlap 1999235 1999231 GTGGCAAAACCGACC CCACAGG ATA CCTGTGG TTTGAGTTTCAGCCC TERM 2256 1999321 - 1999348 + H 100 -9.1 -5.4433 | CCATCAAACAATCAG GCCGCTTTCCC TTTGCC GGGGAGGTGGC TTTTTATTTATATCT TERM 2257 1999609 - 1999584 - H 100 -9.1 -5.45652 | opp_overlap 1999584 1999583 ACCCCCAACAAAAAA GGTTTTCAGCC AAAA AACTGAAAACC CTTGCTGTTAATGGT TERM 2258 2000003 - 1999991 - g 73 -3.3 -5.00616 | opp_overlap 2000002, overlap 2000001 TGGGGGGTGAAAAAA CGGGA AAC TACCG ATTGCCCGGGGCAAC HRM2_17420 1999795 - 2000247 + | putative riboflavin biosynthesis protein ribD TERM 2259 2001146 - 2001129 - g 78 -2.5 -5.24531 | AGGCTTCAGAAAAAA GGAGCAG AGTT CGGCGCC ACCACCGGCAGACGA purA 2000250 - 2001539 + | PurA TERM 2260 2001682 - 2001672 - f 76 -6.8 -4.44448 | opp_overlap 2001672 2001671 ACCAGCTTAAACAAA GGCT TCC AGCC GTTTCTAAAACTTCC HRM2_17450 2001719 - 2001787 + | hypothetical protein TERM 2261 2001801 - 2001840 + F 95 -5.8 -5.63504 | opp_overlap 2001802 2001803 2001805, overlap 2001803 AGTTGGTTTTAAATA ATCAGCTTTGATGGATTC CATT GAATCTGTTAAAGCTGTC TTTTTTTCTGAAGTT TERM 2262 2001803 - 2001838 + F 100 -12.8 -4.45201 | opp_overlap 2001803 2001802 2001805, overlap 2001801 TTGGTTTTAAATAAT CAGCTTTGATGGATTC CATT GAATCTGTTAAAGCTG TCTTTTTTTCTGAAG TERM 2263 2002333 - 2002322 - g 74 -2.2 -5.17576 | GATGAAGCCAAAAAA CTCG TTAA CAAG ATTGCCGACCTTGAA TERM 2264 2002751 - 2002733 - g 76 -3.1 -5.16572 | gap 1, overlap 2002734 2002736 2002744 2002745 ACTGAATTGAAAAAA GC-ACAGG AAAA CCTGCAGC AAGCAGAGGCCCGTT TERM 2265 2002953 - 2002931 - g 100 -4.1 -5.98675 | gap 1, opp_overlap 2002932 2002933, overlap 2002933 TATAAAAACAAAAAA GACCGCCAAC CTTT GTTGGAGG-C TTTACAAAAGTATCA TERM 2266 2002952 - 2002933 - g 79 -7.8 -4.585 | opp_overlap 2002932 2002933, overlap 2002931 TAAAAACAAAAAAGA CCGCCAAC CTTT GTTGGAGG CTTTACAAAAGTATC HRM2_17460 2002280 - 2003683 + | signal transduction family protein (GGDEF domain protein) HRM2_17470 2003812 - 2004156 + | hypothetical protein TERM 2267 2004170 - 2004158 - f 77 -10.5 -3.10959 | TAATCTCAATATAGA CCGGC ATG GCCGG AGCGAGGTATTTGCT TERM 2268 2004789 - 2004777 - f 100 -10.5 -4.3739 | overlap 2004778 GAGTTTCTTATAAAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 2269 2004815 - 2004778 - f 74 -9.7 -3.22113 | overlap 2004777 AGTTTCTTATAAAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATTTTGAAACACCT HRM2_17480 2004798 - 2005532 + | hypothetical protein ppc 2008143 - 2005591 - | Ppc TERM 2270 2006962 - 2006974 + gT 83 -3.4 -5.47399 | TTCATGGACAAGGAT CGAA ATCAG TTCG TTTTTTTCAAGTTCA mscC3 2009002 - 2008106 - | MscC3 TERM 2271 2008645 - 2008633 - GH 91 -7.7 -4.82901 | GTCGGTCGATAAAAA TCAGG ATG CCTGA AATAATATTGGACAG TERM 2272 2009524 - 2009545 + G 74 -4.3 -4.77173 | overlap 2009528 ACTGTTGTCCAATTC CGTTCTGGC GGGC GTCAGTGCG TTTCTTTTCTCAACG HRM2_17510 2009273 - 2010346 + | CBS domain protein (Hemolysins and related protein family) TERM 2273 2010463 - 2010450 - g 85 -3.7 -5.38249 | opp_overlap 2010450 AGCAACCATAAAAAA GGGGG ATAT CCTCC TGGTTGAGGGCAACA HRM2_17520 2010343 - 2011128 + | hypothetical protein TERM 2274 2011572 - 2011598 + G 73 -11.6 -2.89743 | overlap 2011574 TCATCAGCTTTGCCA CGTCAGAGCCCA CCA TGGGATCTGATG TCTCGTCTGTCCGTT TERM 2275 2011574 - 2011596 + G 70 -10.6 -2.99545 | overlap 2011572 ATCAGCTTTGCCACG TCAGAGCCCA CCA TGGGATCTGA TGTCTCGTCTGTCCG TERM 2276 2011806 - 2011790 - g 71 -7.3 -4.11394 | opp_overlap 2011782 ATCCGAGTGGGAAAA CCCATTC CTA AAATGGG CCAGCGAAGTTCCAA TERM 2277 2012257 - 2012269 + G 71 -10.5 -3.1637 | opp_overlap 2012254 2012253 2012252 CCTGGAAAAACTCTA CCGGG ATA CCCGG TTGCTCAGGATCTAT acd7 2011199 - 2012560 + | Acd7 TERM 2278 2012569 - 2012549 - T 70 -3.9 -4.79223 | GCAGACCAGGAAAAA CCAGCCGAA TGA TTCTGGTGG GGAAGGGGACGCTTC HRM2_17540 2013158 - 2012607 - | hypothetical protein TERM 2279 2012785 - 2012775 - G 76 -6.8 -4.56775 | ATTGTCCTTGAAAAA GAGG GCG CCTC CGGTTTCGTCCAGAA TERM 2280 2013169 - 2013186 + r 80 -11.3 -2.69859 | overlap 2013168 CCCATTTTTTTACCC GGGGATC AGGA GATCCCC ATCCTTTTTTTAAGT HRM2_17550 2013875 - 2013174 - | PspA TERM 2281 2013605 - 2013624 + g 86 -9.2 -4.4595 | overlap 2013613 CAAGGCGCTCTGCAT CGGCCGCA TCCA TGCTGCCG TTTTGCATTTTCTGG HRM2_17560 2014388 - 2013999 - | hypothetical protein HRM2_17570 2015444 - 2014416 - | putative calcium-activated potassium channel (Kef-type K+ transport protein) HRM2_17580 2015601 - 2016056 + | putative nitrogen fixation protein NifU (NifU-like protein) HRM2_17590 2016034 - 2016645 + | predicted ABC-type molybdate/tungstate transporter, ATP binding protein (ATPase) HRM2_17600 2017706 - 2016642 - | HTH-type transcriptional regulator HRM2_17610 2018392 - 2017706 - | predicted ABC-type molybdate/tungstate transporter, permease component HRM2_17620 2019245 - 2018409 - | predicted ABC-type molybdate/tungstate transporter, periplasmic substrate binding protein TERM 2282 2018594 - 2018634 + g 72 -9.6 -3.45324 | opp_overlap 2018597 2018600, overlap 2018597 2018607 TGGCATCTCCCTCAA CAAGTACCTGGAGGGGGG CTGTA CCCCCTTTCTGGGACTGG TATTTGATAAAGGTA TERM 2283 2018607 - 2018621 + g 72 -8.5 -3.88291 | opp_overlap 2018600 2018597, overlap 2018597 2018594 AACAAGTACCTGGAG GGGGG CTGTA CCCCC TTTCTGGGACTGGTA TERM 2284 2018721 - 2018733 + g 84 -4.8 -5.26119 | CATGCCCTGGCCTGT CTGG ATATA CCAG TTTTCTTTTTCAGGA TERM 2285 2018772 - 2018783 + g 80 -2.2 -5.5112 | GCCGGTCTGGTTCCA GAGG ATTT TCTC TTTTTTGTTGGTGCC TERM 2286 2019129 - 2019153 + g 100 -7.1 -5.52384 | opp_overlap 2019107 CCCTGTGTTGTCCGT GCTTGTGGTGG TGG CCATCATCAGC TTTTTTTCCTGGGCC TERM 2287 2019306 - 2019290 - R 91 -5.2 -5.63517 | opp_overlap 2019288 2019292 TTGGTAAATAAAAAA GATTCA GTTGT TGAATC TATAGGTTTTAATGG HRM2_17630 2019906 - 2019391 - | putative phosphoesterase TERM 2288 2019561 - 2019574 + g 74 -8.1 -4.03413 | GAACATGGGTGTGGC CCTGG ATCA CCAGG TTTGTGTGGCGAGGT HRM2_17640 2020154 - 2019906 - | hypothetical protein TERM 2289 2019940 - 2019964 + g 82 -7.9 -4.71426 | overlap 2019942 AGGTTGTGGTATTCA TTCTCAGACAG GTG CTGTTTGAGCA TTTTGTTGATAAAAA TERM 2290 2020333 - 2020345 + G 74 -2.6 -5.16472 | AAAATTAAAATCCAG CGCC CTATT GGTG TTTTTTAAAATTTTT TERM 2291 2020924 - 2020961 + G 100 -10.5 -4.72007 | opp_overlap 2020948, overlap 2020914 AGGATTTGGCGAGGC CTATGTCCTGGGCGGAA CCAA TTACGCCCCGGGCAAAG TTTGTTTTGATACCA HRM2_17650 2020295 - 2021320 + | putative lysophospholipase L2 (Lecithinase B) HRM2_17660 2022194 - 2021340 - | putative sulfatase modifying factor 1 precursor TERM 2292 2021606 - 2021618 + g 86 -5.5 -5.27779 | GCATGTCGTATATGC CCCAG TTG TTGGG TTTTTTGGTCTTCAC TERM 2293 2022650 - 2022664 + G 73 -9.2 -3.67588 | opp_overlap 2022650 AGGCAAGGGTTGAAA GGGTCG AAG CGGCCC TTTCAATGAAGTTTG mltD1 2022298 - 2022990 + | MltD1 trpC 2024446 - 2022992 - | TrpC TERM 2294 2023147 - 2023173 + g 80 -10.1 -4.03167 | opp_overlap 2023128 CGGGGTCAAGCCCAC CGGCAAGGATC AATCG GGTCCTGGCCG TTGTTTCCATTCTGG TERM 2295 2023226 - 2023244 + g 70 -10.2 -3.01712 | CCGCGCATTGCCCCC AGGCAGGG TTC CCCTGCCG TCTTCCACAAGAAAG TERM 2296 2023332 - 2023318 - G 76 -7.1 -4.56597 | GCTGCTGGGCAAAAA GGGTC TTGAT GACCC AAATGCCGGACCGGG TERM 2297 2023576 - 2023546 - G 74 -9.7 -3.63744 | gap 1, overlap 2023544 2023549 TTTTTTCGTAAAACA CAAGGCCAATGGCG TCTG CGCCAA-GGCCCTG GCATTGGACCGCCTC trpD2 2025467 - 2024448 - | TrpD2 TERM 2298 2025418 - 2025386 - G 79 -8.3 -4.36914 | overlap 2025387 2025388 TGGTGCCGGAGAAAA TTTCCGACACCATGG ACG CCATGGCGTCGGCGG TCAGGTCCACTCTCC TERM 2299 2025417 - 2025387 - G 79 -11.8 -3.21934 | overlap 2025386 2025388 GGTGCCGGAGAAAAT TTCCGACACCATGG ACG CCATGGCGTCGGCG GTCAGGTCCACTCTC TERM 2300 2025416 - 2025388 - G 83 -15.3 -2.52946 | overlap 2025387 2025386 GTGCCGGAGAAAATT TCCGACACCATGG ACG CCATGGCGTCGGC GGTCAGGTCCACTCT trpG 2026039 - 2025470 - | TrpG trpE 2027526 - 2026033 - | TrpE TERM 2301 2027612 - 2027585 - H 93 -4.1 -5.80364 | gap 1, opp_overlap 2027600 2027600 AGGTCAATAAAAAAA GACCG-GGAAGC TTTAG GCTGCCGCAGTC CTTTTGTGTTCTGTT TERM 2302 2027705 - 2027751 + H 70 -6 -4.4017 | gap 1, opp_overlap 2027716 2027718, overlap 2027708 CAACTGTGATTTTAA CGTGTCAAGCACATTGTTTCT TTTGAT AGAAACAATGTGCGCGGC-TG TTTTCTGAAACTTGG TERM 2303 2027708 - 2027749 + H 88 -11 -3.80535 | opp_overlap 2027716 2027718, overlap 2027705 CTGTGATTTTAACGT GTCAAGCACATTGTTTCT TTTGAT AGAAACAATGTGCGCGGC TGTTTTCTGAAACTT TERM 2304 2027822 - 2027812 - H 70 -2.6 -5.00339 | AGGAATAACGAAAAA TATT CAT AATA AACGTTTTCTTTTGG TERM 2305 2029659 - 2029673 + G 83 -5.6 -5.08824 | overlap 2029660 ATTGCCCCGATCCTG AGGAGG GAC CCTCCG TTTTTTACCTCCAAC TERM 2306 2029660 - 2029672 + G 70 -9.1 -3.64812 | overlap 2029659 TTGCCCCGATCCTGA GGAGG GAC CCTCC GTTTTTTACCTCCAA HRM2_17720 2028135 - 2029712 + | putative methyltransferase TERM 2307 2029819 - 2029841 + G 72 -8.4 -3.85698 | TTTGTAACGTGGGAT CATTGCGCTA TAA TGGCGCCATG TTTATACCCCGCGAA TERM 2308 2030323 - 2030333 + G 83 -3.2 -5.41143 | GCCTTTTCTGGCTTG GTCT GGG AGGC TTTTTTTACACCCTC HRM2_17730 2029752 - 2030486 + | channel protein (hemolysin III family protein) TERM 2309 2031308 - 2031320 + G 71 -5.5 -4.58395 | overlap 2031304 TGGATGCCATTGAGG CCGAG CGT CTTGG TTTTTCCCGGATGAC TERM 2310 2031701 - 2031716 + G 71 -5.4 -4.5442 | overlap 2031703 TGGGTGCAGGCATGG TTCTGG CCCT CCAGGA TTTTGTCATTCCAGA TERM 2311 2031941 - 2031956 + G 86 -6 -5.1101 | overlap 2031943 CGAGCGTTGGAGACC GGGGCG TTGC CGCCAC TTTTTTGCGTCCTGC TERM 2312 2032032 - 2032045 + G 74 -2.3 -5.08601 | opp_overlap 2032033, overlap 2032033 GGGTGAGTTCATTGA ACAGG GATC CCTGA TTTTTGTTGCCATGA clpP2 2030605 - 2032104 + | ClpP2 TERM 2313 2032437 - 2032421 - g 70 -2.2 -5.02476 | overlap 2032435 ATATCTTGGAAAAAA CGGCCT GTCAA AAACCG ATCTTCGGCCTGCTG TERM 2314 2032445 - 2032435 - g 76 -6.8 -4.56775 | overlap 2032421 ACGGCCTGTCAAAAA CCGA TCT TCGG CCTGCTGGATTTGCC HRM2_17750 2032101 - 2032583 + | putative membrane-bound serine protease (ClpP class) TERM 2315 2033474 - 2033463 - g 74 -4.4 -4.84914 | overlap 2033464 AGGCAGACAAGAAAA TTGC CCAG GCAA AGGCTGAGGAACGCC HRM2_17760 2032733 - 2033713 + | putative seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) HRM2_17770 2033731 - 2034237 + | hypothetical protein HRM2_17780 2034272 - 2034895 + | putative nucleotide diphosphate hydrolase (MutT family hydrolase) TERM 2316 2036213 - 2036190 - g 73 -3.2 -5.00884 | gap 1, opp_overlap 2036196 AGGGTTGTGAAAAAA CATG-ACCGAA AGG TTCGTTACATG ATTGTTGGCTACGCC HRM2_17790 2034975 - 2036711 + | putative protein-specific endoprotease CAAX (prenyl protease 1) HRM2_17800 2036959 - 2036708 - | hypothetical protein TERM 2317 2036739 - 2036754 + g 70 -3.2 -4.82901 | TGTTTATGGTCGTGG GCAGTT TTTG ACCTGC TTTTTCTAAGCAGAG TERM 2318 2037027 - 2036976 - R 100 -15.4 -4.25104 | gap 1, opp_overlap 2036981 2036985 2037021, overlap 2036979 GGTCTGGTATCAAAA CGACAACAAGGAAAGCCTGGTCCCA TAG TGGGAA-AGACTTTCCTTGCTGTGG TGAAACTATAGCTTG TERM 2319 2037024 - 2036979 - R 100 -15.7 -3.13504 | gap 1, opp_overlap 2036981 2036985 2037021, overlap 2036976 CTGGTATCAAAACGA CAACAAGGAAAGCCTGGTCCCA TAG TGGGAA-AGACTTTCCTTGCTG TGGTGAAACTATAGC atpE2 2037323 - 2037054 - | AtpE2 TERM 2320 2037419 - 2037391 - R 73 -8.9 -3.56325 | opp_overlap 2037394, overlap 2037394 CCCGCATAACTATAA GCAGCTGTCAACA CCA TGTTGACAGCTTT AGTTCGTTTTCAATG TERM 2321 2037394 - 2037416 + r 100 -15 -4.07675 | opp_overlap 2037391 2037394 GCATAACTATAAGCA GCTGTCAACA CCA TGTTGACAGC TTTAGTTCGTTTTCA TERM 2322 2037416 - 2037394 - R 100 -15 -2.90904 | opp_overlap 2037394, overlap 2037391 GCATAACTATAAGCA GCTGTCAACA CCA TGTTGACAGC TTTAGTTCGTTTTCA atpB2 2038118 - 2037429 - | AtpB2 HRM2_17830 2038523 - 2038119 - | conserved hypothetical protein associated with ATP synthase F0F1 TERM 2323 2038188 - 2038176 - G 73 -3.3 -5.00884 | overlap 2038178 AGTTGCTGCAAAAAA GCTGG CAA CCACC ACCGAAAGACCTGCT atpI2 2038765 - 2038529 - | AtpI2 selD1 2039718 - 2038798 - | SelD1 TERM 2324 2038884 - 2038903 + g 77 -10.8 -3.54424 | overlap 2038887 TCTGGTTCATACGTT CAACGCAA GCCT TTGCGTTG TTTGAACCAATGGAA TERM 2325 2038942 - 2038923 - G 78 -3.5 -5.1848 | overlap 2038924 AACCAATGGAAAAAA GCAGACC ACCCGA GGTCTGT GGGTCGAACATTAGG TERM 2326 2039657 - 2039645 - G 76 -7.7 -4.37092 | ACCGGCGTCAGAAAA TCCAG GGT CTGGA TCAGGGCTGTGGTGT HRM2_17860 2040646 - 2039858 - | hypothetical protein TERM 2327 2039991 - 2040001 + g 76 -6.8 -4.56367 | AGGGTAATGTTTTCA GGTG CGA CACC TTTGTTTATGAGCTG TERM 2328 2040302 - 2040280 - G 71 -7.6 -4.02817 | GGTCCACAAGAAGAA CCGGCTGGCA GTC TGCCACCTGG ATGGCAAGGGCAAGG TERM 2329 2040558 - 2040537 - G 74 -7.9 -4.21275 | gap 1, overlap 2040538 TTAAGGGAGCCAAAA GGGGCGGCGC TCT GC-CCGCCCA TCCGGGTGAAAATTC TERM 2330 2040557 - 2040538 - G 74 -11.4 -3.12283 | gap 1, overlap 2040537 TAAGGGAGCCAAAAG GGGCGGCGC TCT GC-CCGCCC ATCCGGGTGAAAATT HRM2_17870 2041169 - 2040663 - | putative ADP-heptose synthase HRM2_17880 2041675 - 2041169 - | Acyl-CoA thioester hydrolase HRM2_17890 2041809 - 2041991 + | hypothetical protein resR 2042960 - 2043565 + | ResR TERM 2331 2043700 - 2043723 + F 93 -12.6 -3.19371 | opp_overlap 2043699 2043698 TAAATATTAACAACC TGCCATATCA ACCT TGATATGGCA TTACATTGCATCAAT TERM 2332 2044774 - 2044789 + G 79 -9 -4.1552 | opp_overlap 2044774 ACATAAAAGGAGCAA GCCCTT CAGC AAGGGC TTTATTGAAAGGATG HRM2_17910 2043938 - 2045239 + | hypothetical protein HRM2_17920 2046207 - 2046776 + | hypothetical protein HRM2_17930 2047959 - 2046862 - | hypothetical protein TERM 2333 2048555 - 2048569 + H 100 -11.4 -5.27938 | TATATAAATTTGATG GAGGGG ATA CCCCTC TTTTTATTTGCAACT TERM 2334 2048661 - 2048680 + H 77 -5 -5.03314 | overlap 2048662 TAGAGATATTGAGCT TGCTTAGA ATTG TCTGAGCG TTTTTTCAGGATGAC rhlE1 2048919 - 2050202 + | RhlE1 TERM 2335 2050620 - 2050608 - f 86 -10.5 -3.86524 | AGAGTTTCTTATAAA CCGGC ACG GCCGG AACGAGGTATGGCTC TERM 2336 2050752 - 2050728 - f 100 -16.5 -4.45168 | opp_overlap 2050728 TTTTTAAAACATAAA GGCCCTTAGCG TTA CGCTAAGAGCC TTTTAATTTCTGGCT TERM 2337 2050728 - 2050752 + F 100 -14.3 -4.62475 | opp_overlap 2050728 TTTTTAAAACATAAA GGCCCTTAGCG TTA CGCTAAGAGCC TTTTAATTTCTGGCT HRM2_17970 2050947 - 2051261 + | hypothetical protein TERM 2338 2051269 - 2051292 + T 100 -18.2 -4.15201 | opp_overlap 2051255 ATGGGTAGCTGAATC GGCAGCAGCC CATG GGCTGCTGCC TTTGGTTTCGTTAAT HRM2_17980 2053006 - 2051303 - | putative plasmin-sensitive surface protein (Pls family protein) TERM 2339 2051917 - 2051907 - G 76 -4.6 -4.91285 | ATTAACAGAACAAAA GCGA TAC CCGC AAGAATAGCTGCCAT TERM 2340 2052488 - 2052505 + g 74 -2.6 -5.08088 | overlap 2052489 TTCGGCCTTTTTAGC GGCCTG ATCAGC CAGGCG TTTTTCTTCAGCCTT TERM 2341 2053101 - 2053115 + H 70 -5.8 -4.29227 | opp_overlap 2053100 2053096, overlap 2053097 CATATATAATTCAAC GTATTT TGT AAATAC TTTGTTGGTGGTTGA HRM2_17990 2053167 - 2053997 + | ATP-utilizing protein of the PP-loop superfamily ndk 2054494 - 2054078 - | Ndk HRM2_18010 2054791 - 2054991 + | hypothetical protein TERM 2342 2055018 - 2055048 + F 100 -11.3 -3.94811 | opp_overlap 2055024, overlap 2055024 GATAGCTAAGATCCA TAGAAAGTGCTCC CCAGT GGAGCACTTTTTG TTTCTCCCTCCTCTT TERM 2343 2055042 - 2055024 - f 91 -10.3 -4.08939 | opp_overlap 2055018 2055024 TAAGATCCATAGAAA GTGCTCC CCAGT GGAGCAC TTTTTGTTTCTCCCT TERM 2344 2055024 - 2055042 + F 100 -10.3 -5.38958 | opp_overlap 2055024, overlap 2055018 TAAGATCCATAGAAA GTGCTCC CCAGT GGAGCAC TTTTTGTTTCTCCCT HRM2_18020 2055145 - 2055987 + | hypothetical protein leuC1 2055987 - 2057300 + | LeuC1 TERM 2345 2057397 - 2057385 - g 73 -9.1 -3.77219 | AGTATCTAACGGAAA GCACC AAA GGTGC CCTGAAACCCTTTAT leuD1 2057297 - 2057821 + | LeuD1 thyX 2057834 - 2058499 + | ThyX thiN 2059115 - 2058480 - | ThiN HRM2_18070 2059403 - 2059179 - | hypothetical protein HRM2_18080 2059368 - 2060420 + | hypothetical protein TERM 2346 2061510 - 2061524 + G 80 -3.4 -5.23292 | GCCTGATATTGTCAT GGGCGG CAT CGGCTC TTTTCTTTTGTATCG HRM2_18090 2060455 - 2061630 + | predicted permease family protein TERM 2347 2062622 - 2062638 + G 100 -8.7 -5.09895 | ACCTCCCTGGGGTAC GGGGGAA TGA TTCCTCC TTTTTTGAGTGCCTG HRM2_18100 2061635 - 2062714 + | putative permease TERM 2348 2063333 - 2063358 + G 74 -8.4 -4.1021 | gap 1, overlap 2063349 CCGGCGCAGTGATGC CCTGGTCCTGA CACGT TCA-GACCAGG TTTCTGATTCTGCGG lpxK 2062707 - 2063894 + | LpxK TERM 2349 2063901 - 2063923 + F 82 -7 -4.8048 | overlap 2063902 2063918 GAAATTTGAAGTTTC TCCACTGG TGATGTC CCAGTGGG TTTTTCGTATAACCC TERM 2350 2063902 - 2063922 + F 71 -8.3 -3.47806 | overlap 2063901 2063918 AAATTTGAAGTTTCT CCACTGG TGATGTC CCAGTGG GTTTTTCGTATAACC TERM 2351 2064159 - 2064147 - f 100 -10.5 -4.53303 | overlap 2064148 GAGTTTCATATAAAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 2352 2064185 - 2064148 - f 76 -9.7 -3.315 | overlap 2064147 AGTTTCATATAAAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATGATGAAACGCCT TERM 2353 2064944 - 2064909 - g 78 -9.8 -3.9373 | TATCGAAAACTTAAA TTTCCACCCCTTGACA GATA TGTCAAGGAACGGAGA AGTGCCACGGGATGT msbB 2064462 - 2065358 + | MsbB TERM 2354 2065984 - 2066004 + GF 74 -4.6 -4.81752 | AAAGGGTGGGGGGTT GCCTGGGG CCGTA TTCCGGGC TTTTTGGGTCTTTTT kdtX 2065355 - 2066158 + | KdtX TERM 2355 2066743 - 2066725 - gT 100 -5.2 -5.86965 | opp_overlap 2066726, overlap 2066726 ATGCATCAAAAAAAA TGGCGATG GAT CATCACCT TGCATCCCAAGATGG TERM 2356 2066742 - 2066726 - gT 83 -8.7 -4.10552 | opp_overlap 2066726, overlap 2066725 TGCATCAAAAAAAAT GGCGATG GAT CATCACC TTGCATCCCAAGATG tagB1 2066119 - 2067204 + | TagB1 TERM 2357 2067200 - 2067184 - T 70 -5.1 -4.41797 | opp_overlap 2067187, overlap 2067187 AAAATGAGATTAAAA TATCGGT ATT ACCGTTA TTAGTCATGGAACCC HRM2_18150 2068176 - 2067229 - | radical SAM domain protein rfaG1 2069317 - 2068178 - | RfaG1 TERM 2358 2069074 - 2069054 - G 72 -8.3 -3.8647 | opp_overlap 2069054 ATGGATTAGATCAAA CTTTTCCTG TTC CAGGAACAG GCCCAGTCGTTGCAC hldE 2069695 - 2070144 + | HldE tagB2 2070141 - 2071208 + | TagB2 HRM2_18190 2071231 - 2071383 + | hypothetical protein TERM 2359 2072633 - 2072643 + G 91 -5.4 -5.40072 | AAAAGAGGGGCAGAT GCAA TTG TTGC TTTTTTTGAAAAGAA HRM2_18200 2071550 - 2072707 + | putative tarF (CDP-glycerol glycerophosphotransferase family protein) HRM2_18210 2073105 - 2072743 - | hypothetical protein TERM 2360 2073409 - 2073420 + G 76 -5.8 -4.71828 | TTTTTTATTAGGTCT CCTG ATTA CAGG TTTTATTAGTACCGT TERM 2361 2073882 - 2073869 - g 80 -2.4 -5.52023 | opp_overlap 2073864 2073869 2073870, overlap 2073870 AGCATTAACAAAAAA GCAA TTGCTT TTGC TATTGTAATTGTCTG TERM 2362 2074329 - 2074346 + G 83 -3.3 -5.45652 | overlap 2074330 2074331 TTGGTGCTATTATTA TTCCAGC CATA GCTGGGC TTTTTTATTCACCCT HRM2_18220 2073209 - 2074447 + | putative teichuronic acid biosynthesis protein TuaE HRM2_18230 2075068 - 2074859 - | hypothetical protein HRM2_18240 2075325 - 2076092 + | hypothetical protein kdkA 2077275 - 2076589 - | KdkA kdsB 2078006 - 2077272 - | KdsB TERM 2363 2077557 - 2077547 - G 87 -8.2 -4.86385 | opp_overlap 2077547, overlap 2077555 ATCGGGAAAAATAAA GGGC AAA GCCC TTCTGGTTAAGGGTG kdtA 2079329 - 2078025 - | KdtA TERM 2364 2078610 - 2078625 + g 79 -9 -4.13767 | opp_overlap 2078597 AAGGGTCACTGGTGT CCCCTT GGGA AAGGGG TTTTGGGGTAGGAGG TERM 2365 2079215 - 2079232 + g 100 -8.3 -5.40072 | opp_overlap 2079213 2079214 TGCGCTGGTCAAACC CCCTGCG GAGC CGCCGGG TTTTTTTCAGCCACG TERM 2366 2079919 - 2079929 + G 76 -6.8 -4.43859 | GGGCCTTTCTTGTTC TGCC TGC GGCA TTTTATCCGATTATA TERM 2367 2080219 - 2080243 + G 100 -2.7 -6.0458 | overlap 2080220 GCGGGTCCAGGGTTA TTTCCGGGGCA TCC TCCACCGGAAC TTTTTTTTCCTTTCT TERM 2368 2080774 - 2080792 + G 74 -11.8 -2.71924 | overlap 2080773 CCCAAAAAGCCTTTG CCCATGAT TTC ATCATGGG GTTTCCAGAAGGGTA msbA1 2079444 - 2081153 + | MsbA1 TERM 2369 2081406 - 2081424 + F 75 -8.8 -3.63425 | overlap 2081404 AAACGTCATTGTTAA GGTCTCGA CTT TCGAGCCC TCTTTGGTTTCCCTG TERM 2370 2081746 - 2081758 + G 77 -10.5 -3.51161 | overlap 2081757 AAGCCATACCTCGCT CCGGC CGT GCCGG TTATATAAACCTTTC TERM 2371 2081953 - 2081939 - g 73 -2.8 -4.99665 | opp_overlap 2081941, overlap 2081941 CAAAAAAAAGGAAAA TACTGA GGA TCAGTT TTGTTGGGGATCTTT TERM 2372 2081941 - 2081951 + G 73 -5.4 -4.65078 | opp_overlap 2081939 2081941 AAAAAAAGGAAAATA CTGA GGA TCAG TTTTGTTGGGGATCT HRM2_18290 2081664 - 2081996 + | hypothetical protein rfaF 2082954 - 2081968 - | RfaF arnT 2084583 - 2082958 - | ArnT TERM 2373 2083911 - 2083890 - G 71 -7.2 -4.09243 | overlap 2083905 CAGATGCTCCGAAAA GCCAGGCT GCGAAA AGCCAGGC ACCTGGCCAGACAAG TERM 2374 2083918 - 2083905 - G 74 -8.1 -4.08767 | overlap 2083890 GCCAGGCTGCGAAAA GCCAG GCAC CTGGC CAGACAAGGGACAGT TERM 2375 2084166 - 2084179 + g 70 -9.5 -3.28712 | opp_overlap 2084164 GAAGCACATCAATCT GGCCG GTGC CGGCC TTGTGCCAGAACAGA TERM 2376 2084247 - 2084217 - G 76 -6.1 -4.73108 | opp_overlap 2084212 2084218 2084225 TGGATAAAATGAAAA TGGCATACCAGGC CGTTT GCCTGTTGTACCA GAGGGCTGTAAGTCT HRM2_18320 2085308 - 2084580 - | hypothetical protein arnC 2086074 - 2085310 - | ArnC glpK 2086546 - 2088063 + | GlpK HRM2_18350 2088085 - 2089176 + | ABC-type transporter, ATP-binding protein (ATPase) HRM2_18360 2089194 - 2090288 + | ABC-type sugar transport system, ATP-binding protein TERM 2377 2090524 - 2090547 + G 70 -2.4 -5.04249 | gap 1 TTGTCCGACACCCGG CTGCACGAGGC ATT GATTCGT-CAG TTTATTTTTTCAGGC malK 2090341 - 2091213 + | MalK TERM 2378 2091234 - 2091223 - g 91 -4.4 -5.55664 | opp_overlap 2091223 GCATGATGAAAAAAA GAAC CATT GTTC TCATTGTCTATCTCT TERM 2379 2091773 - 2091785 + G 73 -3.3 -4.99861 | GATTCGATCCGGTGT CGGTG TTA CAGCG TTTTTCTGCTTCATG TERM 2380 2092000 - 2091974 - g 82 -10.3 -3.85698 | gap 1, overlap 2091977 CTGGTTCGTCAGAAA CCACATGGCAAA GGGT TTTGCCATG-GG ACGGGTATAGGAGGA TERM 2381 2091998 - 2091977 - g 76 -11.7 -3.00946 | overlap 2091974 GTTCGTCAGAAACCA CATGGCAAA GGGT TTTGCCATG GGACGGGTATAGGAG malG 2091210 - 2092010 + | MalG TERM 2382 2092159 - 2092173 + G 76 -2.7 -5.11112 | opp_overlap 2092159, overlap 2092160 TGCCCATTGCAACCA CCCGG GGTGA CCGGC TTTTTATTGGCCTTT HRM2_18390 2092020 - 2092298 + | hypothetical protein malE 2092402 - 2094150 + | MalE TERM 2383 2094167 - 2094205 + T 100 -16.1 -5.60993 | gap 1, opp_overlap 2094165 CTAGGGTATTACACG GGCCGACGTC-TGACCTG ACAT CAGGTCATGGGGTCGGCC TTTTTTTATGGGGGC HRM2_18410 2095475 - 2094264 - | putative RNA methylase family protein HRM2_18420 2095865 - 2096038 + | hypothetical protein TERM 2384 2096205 - 2096215 + G 86 -8.2 -4.61231 | opp_overlap 2096198, overlap 2096198 CTACCACAGGGAGAT GGGG TCC CCCC TTTTTCGGCGTGTGG TERM 2385 2096525 - 2096546 + G 83 -9.5 -4.25104 | GTTTCCTTGAAATTG TCAGGGCAA AGTA TTGCCTTGA TTTTAATAAAGAGAG HRM2_18430 2096035 - 2096574 + | hypothetical protein TERM 2386 2096901 - 2096861 - g 71 -5.3 -4.58663 | opp_overlap 2096888, overlap 2096862 ATCACTTCTTAAAAA CTGCCTGGCCCTGGACG CTGACCT CACCCTGGACCAGGTAA TTGCAGGACGGGACA HRM2_18440 2096571 - 2097452 + | hypothetical protein HRM2_18450 2097477 - 2097743 + | hypothetical protein TERM 2387 2097752 - 2097722 - f 73 -2.5 -5.09426 | TTCAACTTTAAAAAA CCAGGAAAATGAC GAGGG GTAGTTCTCCCGG AAGCAAAGGACATTA gmk 2097770 - 2098342 + | Gmk HRM2_18470 2098339 - 2099100 + | RNA methyltransferase (TrmH family protein, group 3) TERM 2388 2099113 - 2099101 - f 78 -10.5 -3.33162 | CAGCTGACTGCATAA CCGGC ACG GCCGG GGCGAGAGATGGCAT TERM 2389 2099263 - 2099251 - f 86 -9.1 -4.34402 | CCTTCCAGACTAAAA CGCAG GAA CTGCG GGCTAAAGTCCTCAA TERM 2390 2099637 - 2099625 - f 86 -10.5 -3.83502 | GAGTTTCATATGAAA CCGGC ATG GCCGG AGCGAGGGTTGGCCC TERM 2391 2099913 - 2099901 - gf 83 -3.3 -5.43866 | TAACGGTCAAAAAAA GATCC AGT GGCTC AATATTCCTGCCGGA citC 2099740 - 2100972 + | CitC TERM 2392 2101000 - 2101014 + GF 79 -8.5 -4.07687 | CCCGTCTGGGAAGGG GGGCG TTGAC CGCCC TTTTCCCGGACAAGT TERM 2393 2101246 - 2101261 + GF 70 -7.5 -3.84246 | TCGACTGCATCAAGG CGGCC CAGACA GGCCG TTTCATGGTTGGAAG comF 2100915 - 2101790 + | ComF TERM 2394 2103344 - 2103358 + G 79 -5.6 -5.01732 | GTGGACGGGGCTGCC CGGATC TGT GACCCG TTTTTTGACGGCATT HRM2_18500 2101880 - 2103433 + | oxidoreductase (3-oxoacyl-[acyl-carrier-protein] reductase) nahJ 2103468 - 2103668 + | NahJ TERM 2395 2104176 - 2104160 - g 82 -6.5 -4.75219 | opp_overlap 2104160 GAACCATTAATAAAA GCGACTG ATG CAGTGGC TCGTTATGACCAAAT TERM 2396 2104532 - 2104522 - g 70 -3.2 -4.85618 | AAAGAACGAACAAAA CTAC TTG GCAG ATAAGTTAAAGAAAA TERM 2397 2105058 - 2105046 - g 86 -9.1 -4.50661 | AATTTACAACTAAAA GTGGG ATA CCCAC AGCGAGTGCAGCAAG HRM2_18520 2104064 - 2105185 + | hypothetical protein HRM2_18530 2107588 - 2105477 - | transcriptional accessory protein (S1 RNA binding domain protein) TERM 2398 2106473 - 2106493 + g 84 -11.1 -3.90045 | overlap 2106469 CTCCCTTCCAGCCGT GCCATTGCC AAT GGCTATGGC TTCTGTTTCATGTTC TERM 2399 2107249 - 2107263 + g 74 -8.5 -4.11447 | opp_overlap 2107239 CTAAACCCTGTTCCC GGGCC GTCTG GGCCC TTGTCTTTCTTTTTG uvrA2 2110407 - 2107585 - | UvrA2 pdxA 2111426 - 2110404 - | PdxA TERM 2400 2112232 - 2112217 - g 73 -3.2 -4.96848 | overlap 2112219 TGGGCCAGATAAAAA TTGACC TGAT GGTCGA AACCAAGGGCGTTAA TERM 2401 2113128 - 2113115 - g 73 -5.3 -4.66002 | CAGGAACAAAAAGAA CATCA CCGT TGATG TGATCAAAAAACTGG TERM 2402 2113189 - 2113173 - g 76 -6.5 -4.56775 | AGCCTTTCCGAAAAA GAGCTGG TCT CCACCTC AAGGAAACAAACTGT dnaA 2112000 - 2113409 + | DnaA TERM 2403 2114743 - 2114774 + G 79 -7.2 -4.4767 | overlap 2114745 AATAAAACAGGTCTT TGATCCCGGGAATC TGTT GAATCCCGGGAAGA TTTTCTAGTGCATCC glcD2 2113406 - 2114782 + | GlcD2 HRM2_18580 2115012 - 2114779 - | hypothetical protein HRM2_18590 2116725 - 2115067 - | hypothetical protein TERM 2404 2115151 - 2115172 + g 79 -12.3 -3.31144 | opp_overlap 2115151 2115148, overlap 2115111 2115144 2115108 AGCCGAGACAAGGGA CCCCTGGTT TAAA AGCCAGGGG TTGTCAAAGTCGGCA dnaB 2118092 - 2116722 - | DnaB TERM 2405 2116846 - 2116857 + g 79 -7.2 -4.57912 | ATGATTTCAGCCTTG CCCC GGTT GGGG TTGTTTTCTTCTTTG TERM 2406 2118112 - 2118163 + r 100 -14.7 -3.44527 | gap 1, opp_overlap 2118129 GGAAAGGCATTACCT TTG-TGGGTTTGGGATAATCCGCC ATGGC GGCGGATTATCCCAAGCGTGGCAA TTATGCTACTGGGTC TERM 2407 2118145 - 2118129 - R 76 -10.1 -3.28712 | opp_overlap 2118112 GTGGGTTTGGGATAA TCCGCCA TGG CGGCGGA TTATCCCAAGCGTGG rplI 2118624 - 2118169 - | RplI TERM 2408 2118641 - 2118666 + r 79 -8.3 -4.13973 | opp_overlap 2118641 2118642, overlap 2118656 TCAACCTCCGATAAA GGTTCAACCTG ACGT CAGGTTGGAAC TTATTTCTGATCTGT HRM2_18620 2119631 - 2118699 - | hypothetical protein TERM 2409 2119146 - 2119127 - G 80 -4.9 -5.1101 | overlap 2119130 TCATGACGGAAAAAA GAGCCGG CATGAT CCGGGTC ATGACATAGTGAATG rpsR 2119955 - 2119704 - | RpsR rpsF 2120424 - 2119957 - | RpsF HRM2_18650 2122419 - 2120626 - | ABC-type transporter, ATP-binding protein (ATPase) HRM2_18660 2122668 - 2122423 - | hypothetical protein TERM 2410 2123207 - 2123221 + GH 100 -10 -4.79752 | GGCAGGGTGGTGGAG CTCCAG CCC CTGGAG TTTTCTCTTCTTGAA HRM2_18670 2122757 - 2123443 + | two component transcriptional regulator (Winged helix family protein) TERM 2411 2123588 - 2123604 + GF 72 -7.9 -3.7732 | opp_overlap 2123585 TCTTGTTGATAAGGC CGGCCGA TTT TCCGCCG TTCTTGATGTCCAGG HRM2_18680 2123412 - 2124842 + | sensory box histidine kinase degP 2124921 - 2126354 + | DegP TERM 2412 2126416 - 2126376 - f 100 -13.4 -3.65199 | gap 1, opp_overlap 2126381, overlap 2126381 AACTTTTTATTGAAA CAAAAGGCCCCAGGGGGTG TAAA CACACC-TGGGGCCTTTTT TGTTCTAACCGGTTT TERM 2413 2126411 - 2126381 - f 100 -13.3 -4.90778 | gap 1, opp_overlap 2126381, overlap 2126376 TTTATTGAAACAAAA GGCCCCAGGGGGTG TAAA CACACC-TGGGGCC TTTTTTGTTCTAACC TERM 2414 2126381 - 2126411 + F 100 -13.3 -5.55769 | gap 1, opp_overlap 2126381 2126376 TTTATTGAAACAAAA GGCCCCAGGGGGTG TAAA CACACC-TGGGGCC TTTTTTGTTCTAACC TERM 2415 2126517 - 2126488 - f 100 -8.7 -5.77988 | gap 1 ATACAGACAAAAAAA GGTCCTTTAACCCA TGG CGGGT-AAAGAACC TGAATACAATTTCTA TERM 2416 2128488 - 2128512 + G 100 -9.9 -5.02502 | AAAACCCGGTTCATC CCGCAGTTGTC ACG GGCAGCGGCGG TTTTTATGTCATCTC ppiD1 2126798 - 2128690 + | PpiD1 TERM 2417 2128799 - 2128812 + G 70 -9.5 -3.28712 | GGTGAAAAGCCTTGA GCCGG ATCC CCGGC TTGTCCAGGGACGGC HRM2_18720 2128692 - 2131523 + | peptidase M16 family protein HRM2_18730 2131953 - 2131558 - | hypothetical protein TERM 2418 2132123 - 2132144 + r 84 -5.3 -5.3798 | gap 1, opp_overlap 2132123, overlap 2132124 AGGGGTATGAATTGA T-TGCCATAT TTT ATATGGCATA TTTTTCTTATTCTTG TERM 2419 2132124 - 2132142 + r 100 -10.4 -4.28653 | opp_overlap 2132123, overlap 2132123 GGGGTATGAATTGAT TGCCATAT TTT ATATGGCA TATTTTTCTTATTCT aspG 2132652 - 2132170 - | AspG TERM 2420 2132454 - 2132466 + g 70 -4.8 -4.61868 | CATCAGTCAGGAGCG CGTC AACAA GACG TTTTCTGTCTGCGTC recX 2133127 - 2132642 - | RecX TERM 2421 2133021 - 2133032 + g 82 -3.6 -5.33026 | TCGTCAATGATTTTT GGGT CAAA GCCC TTTTTCTTTAAGTTG HRM2_18760 2133891 - 2133124 - | acyl-acyl carrier protein thioesterase TERM 2422 2133517 - 2133537 + g 76 -3.2 -5.1861 | overlap 2133518 CATGTATCGGCTCAA CCGGACAG GTCGG CTGTTCGC TTTTTTGATCATCAC TERM 2423 2133667 - 2133683 + g 91 -5.1 -5.4433 | AATGGCGATCTCGTC CCTCC AGGCCGG GGAGG TTTTTATTTCTATCT HRM2_18770 2134234 - 2133899 - | hypothetical protein HRM2_18780 2137483 - 2134250 - | hypothetical protein TERM 2424 2134988 - 2135005 + g 83 -9.1 -4.36127 | gap 1 CTCGGTCTTTTTCCT GCCCAGGG TTA CCC-GGGC TTTTACCTTGTTGAA TERM 2425 2135926 - 2135942 + g 70 -9.5 -3.30124 | TCGCGGCCAGGTTGT CGATGAA AAT TTCATCG TTCTGAAAGGTGAAG TERM 2426 2136885 - 2136909 + g 72 -3.6 -4.81306 | gap 1 TCATCCATTTTAAAA TCTTTGGCAGA CAAT TC-GCCGGAGA TTCTTTTTTGTTCAG ppiC1 2137794 - 2137513 - | PpiC1 prc 2139976 - 2137901 - | Prc TERM 2427 2139936 - 2139923 - G 73 -3.1 -5.00616 | TTGCGGGGTAAAAAA CAACA GAAG TGCTG CAACCAGGGCCAGAA HRM2_18810 2140851 - 2139976 - | GTP-binding family protein (GTPase) TERM 2428 2140426 - 2140443 + g 79 -5.5 -5.00616 | overlap 2140427 GGTGATGGCAGGGAC ATTGCCC GTTC GGGCAAC TTTTTTACCGGCAAG TERM 2429 2140427 - 2140442 + g 70 -9 -3.60048 | overlap 2140426 GTGATGGCAGGGACA TTGCCC GTTC GGGCAA CTTTTTTACCGGCAA TERM 2430 2140728 - 2140783 + g 74 -9.8 -3.5394 | gap 1, overlap 2140732 2140749 TCGTGTCAAGAAGGG GGTTGCTGCTGGACACGGGGATTCTTG CAT CAAGAATTTCCATGACCA-CGTCAGCC TTTGCAACCGCCTTT HRM2_18820 2141245 - 2140859 - | hypothetical protein TERM 2431 2141648 - 2141660 + G 70 -3.3 -4.8048 | opp_overlap 2141648 TTTTGCGATGACAAG CTTCC CCT GGACG TTTTTGATGTGAGAG HRM2_18830 2141480 - 2142592 + | predicted membrane-bound peptidoglycan-binding family protein HRM2_18840 2142801 - 2142628 - | hypothetical protein HRM2_18850 2144471 - 2142867 - | hypothetical protein TERM 2432 2144502 - 2144518 + r 81 -9.5 -3.78677 | overlap 2144496 2144500 TGCAGCAGATCTTTT TCAGAGA TGC TCTCTGA TGTTTTGGGTTGTTT HRM2_18860 2145376 - 2144483 - | hypothetical protein TERM 2433 2145077 - 2145098 + g 79 -6.5 -4.64861 | overlap 2145078 CTGGTGTTGAATCTT TGCCATGTC CACG GTCATGGCG TTTATTTTGGCCCCC guaA1 2146910 - 2145381 - | GuaA1 TERM 2434 2145678 - 2145700 + g 78 -4.1 -5.08824 | gap 1 AAGGAGAAGGGTATC GGCTG-CCTT CAGG ATGGACAGCC TTTTTTCACTGACAG TERM 2435 2147420 - 2147431 + G 73 -5.8 -4.54026 | opp_overlap 2147418 2147420 TTTTAAAGGACAATA CCGT TTGT ACGG TTCTTTTCTTTAACG efp1 2147095 - 2147658 + | Efp1 HRM2_18890 2147665 - 2149770 + | two-component hybrid sensor and response regulator histidine kinase HRM2_18900 2149859 - 2150509 + | hypothetical protein TERM 2436 2150586 - 2150600 + G 91 -3.4 -5.8187 | opp_overlap 2150580 2150577 AAGCAAGATCCGGCA GGCCCG GTC TGGACC TTTTTTTGTTCGGTC TERM 2437 2150765 - 2150777 + G 73 -5.5 -4.60889 | TATTGATGACATGTA CCACT CCT GGTGG TTTTTGACCCTACTT TERM 2438 2151050 - 2151039 - g 73 -5.8 -4.56597 | CTGTTTGCTGAAAAA GGTC GCTG GACC CGGATTGGCGTATAC TERM 2439 2151694 - 2151728 + G 71 -7.1 -4.24786 | gap 1, opp_overlap 2151694, overlap 2151694 2151696 AAAAGCTGTACTACA CCGG-CCTTCAGGTCA ACCG TGACCCGGGGGTCTGG TTTGTCTATTCTGGA TERM 2440 2151763 - 2151776 + G 72 -3.8 -4.8048 | TCCTCATGATCATCG GGTG CTGGAT CACC TTTTTCATGTCCCAC resB 2150553 - 2151932 + | ResB TERM 2441 2152226 - 2152244 + G 73 -5.9 -4.52873 | overlap 2152226 2152225 AGGGAGCGGATTATC GGGGTGT TTGCC ACCCCCC TTATTTTTCTGGCCA ccmC2 2151929 - 2152762 + | CcmC2 HRM2_18930 2152972 - 2153646 + | putative cytochrome c, class III family protein HRM2_18940 2153695 - 2155842 + | molybdopterin oxidoreductase, molybdopterin-binding subunit TERM 2442 2156598 - 2156564 - g 70 -8.7 -3.5936 | opp_overlap 2156591 TGGAAAGCCGCGAAA TCCCAAGGCATTC CGCCTGCTT GAACGCCTTGAGA CAAACCCCAAGGTTT HRM2_18950 2155875 - 2156714 + | molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit TERM 2443 2157420 - 2157440 + G 70 -8.1 -3.75629 | CTGTTTACCTGGTCT GCCGCGGCC TAT GGCCCCTGC TTTACCTTGACGGTC HRM2_18960 2156742 - 2157977 + | molybdopterin oxidoreductase, transmembrane subunit TERM 2444 2158069 - 2158081 + G 75 -9.1 -3.90762 | overlap 2158066 2158067 2158078 GAATGGGCATGGGAT GCAGG GCA CCTGC TGTTTTTCGGCGGTA HRM2_18970 2158036 - 2158191 + | hypothetical protein TERM 2445 2158228 - 2158267 + F 100 -16.6 -5.65927 | gap 1, opp_overlap 2158228 TTTGATGTTTAAAAA GGCGTATCCCCGG-CTCTT TTC AAGAGTTCAGGGATACGCC TTTTTTATTTACATC TERM 2446 2158267 - 2158228 - f 100 -16.6 -4.59773 | gap 1, opp_overlap 2158228 TTTGATGTTTAAAAA GGCGTATCCCCG-GCTCTT TTC AAGAGTTCAGGGATACGCC TTTTTTATTTACATC HRM2_18980 2158303 - 2158413 + | hypothetical protein HRM2_18990 2159207 - 2158608 - | hypothetical protein TERM 2447 2159154 - 2159173 + g 79 -9.3 -4.25104 | opp_overlap 2159154 CTTTTTTTGAACCCA GGGAGCT GGAAGA AGCTCCC TTTTGATGCAAAGCA glpQ1 2160033 - 2159230 - | GlpQ1 TERM 2448 2160003 - 2160022 + g 70 -3.4 -4.7871 | overlap 2160005 2160006 CAGGGGCCAGACTTC TGGCGCCC CTGT GGGCGATG TTTTTGGTCATGGTT TERM 2449 2160157 - 2160185 + r 71 -8.2 -3.56558 | gap 1, overlap 2160158 AGGTTTTAAATTTCG TTGGGGTCAGGGT ATAT ACCCTG-CTCCAG TTATGTGGGTTATAC HRM2_19010 2160535 - 2160329 - | hypothetical protein ptsH 2160578 - 2160868 + | PtsH ptsA2 2160861 - 2162636 + | PtsA2 smpB 2162655 - 2163119 + | SmpB HRM2_19050 2163530 - 2163216 - | hypothetical protein TERM 2450 2163295 - 2163278 - G 91 -2.7 -5.75342 | opp_overlap 2163279, overlap 2163279 CTGGCGGAAAAAAAA GTAATCG CAGA CGATTAT AATTACGCTGTAGCA TERM 2451 2163392 - 2163404 + g 74 -4.8 -4.75776 | opp_overlap 2163392 GGGAAAGCTTGAAAA GGGT GCCTG ACCC TTTTTCGGTTAAATT HRM2_19060 2163728 - 2163558 - | hypothetical protein TERM 2452 2163620 - 2163632 + g 86 -3.3 -5.5353 | opp_overlap 2163608 2163607, overlap 2163604 2163603 2163621 AATCCTGGTAGAATT CCAGG GTT CCTGA TTTTTTATTAGTCTG HRM2_19070 2164881 - 2163721 - | predicted bacteriophage P4 integrase TERM 2453 2164795 - 2164810 + g 70 -3.2 -4.84359 | overlap 2164790 2164789 GAACTTGTACGGCTT GGGAAG CCCT CTTACC TTTTTCTGAAAATAC HRM2_19080 2165180 - 2164884 - | hypothetical protein TERM 2454 2165070 - 2165082 + g 74 -4.1 -4.94972 | GTATGACAGCAACCC TTGGT CTC GCCAA TTTTTAATTGTACTC TERM 2455 2165211 - 2165231 + r 70 -3.9 -4.77165 | overlap 2165207 2165206 2165219 TTACCAATTTGCCAG CTCCAGGGC TGG GTTGTGGAG TTTTCTTCTCCGCCC TERM 2456 2165219 - 2165248 + r 84 -6.3 -5.05782 | overlap 2165207 2165206 2165211 TTGCCAGCTCCAGGG CTGGGTTGTGGAG TTTT CTTCTCCGCCCAG TTTTTTGAGATGGGT HRM2_19090 2166193 - 2165633 - | hypothetical protein HRM2_19100 2166410 - 2166180 - | hypothetical protein HRM2_19110 2167356 - 2166763 - | site-specific recombinase/integrase XerD HRM2_19120 2167394 - 2167525 + | hypothetical protein HRM2_19130 2167831 - 2168487 + | hypothetical protein HRM2_19140 2168648 - 2168466 - | hypothetical protein HRM2_19150 2168693 - 2168923 + | hypothetical protein HRM2_19160 2170262 - 2169084 - | hypothetical protein TERM 2457 2169669 - 2169659 - G 100 -3.2 -5.93809 | GCGTGATAAAAAAAA CTGC ACC ACAG GAACTTTTCATGCCT HRM2_19170 2171157 - 2170273 - | RNA-directed DNA polymerase (retron-type reverse transcriptase) HRM2_19180 2171461 - 2171150 - | putative transcriptional regulator HRM2_19190 2171766 - 2171512 - | hypothetical protein TERM 2458 2171905 - 2171887 - H 100 -6.8 -5.63236 | ATCCAAAAATAAAAA GAAGAATA TGC TATCCTTC TAATCCAGGAGCATT TERM 2459 2172099 - 2172085 - H 100 -12.8 -3.24021 | opp_overlap 2172084 2172081, overlap 2172080 2172078 TTGTCAAAGAGCGAA CCGGCG TTT CGCCGG GCTGTTTCAAGAATA TERM 2460 2172291 - 2172325 + H 70 -2.6 -5.07567 | opp_overlap 2172292 2172293, overlap 2172293 TTTAGAAACAAAAAA AGTCCAACCGCCCCGG TCC CTGAGACGGCTGGATG TTTTTTCCAATATGA TERM 2461 2172324 - 2172292 - H 100 -8.3 -6.02919 | opp_overlap 2172291 2172293, overlap 2172293 TTAGAAACAAAAAAA GTCCAACCGCCCCGG TCC CTGAGACGGCTGGAT GTTTTTTCCAATATG TERM 2462 2172323 - 2172293 - H 100 -11.8 -4.19311 | opp_overlap 2172291 2172293, overlap 2172292 TAGAAACAAAAAAAG TCCAACCGCCCCGG TCC CTGAGACGGCTGGA TGTTTTTTCCAATAT TERM 2463 2172293 - 2172323 + H 73 -7.4 -4.16351 | opp_overlap 2172293 2172292, overlap 2172291 TAGAAACAAAAAAAG TCCAACCGCCCCGG TCC CTGAGACGGCTGGA TGTTTTTTCCAATAT TERM 2464 2172864 - 2172849 - g 82 -6.8 -4.89233 | opp_overlap 2172857 GATGAATATTAAAAA GCGACG TTGC CGTCAC TGTGGCCGCCTTTTC HRM2_19200 2172835 - 2173308 + | hypothetical protein parB 2173395 - 2174318 + | ParB HRM2_19220 2174275 - 2175777 + | putative integrase family protein TERM 2465 2176042 - 2176025 - g 76 -2.7 -5.1675 | CTATCCAGGAAAAAA GTCATTA ACAT TTATGAC TCGGACTACATGGAA istB1 2175770 - 2176510 + | IstB1 HRM2_19240 2176519 - 2177055 + | putative DNA primase TERM 2466 2177699 - 2177715 + T 79 -6.6 -4.68655 | opp_overlap 2177687 2177686 2177698 2177695 AATTTGACCAACCAT TGGTCA CCAGA TGACCA TTTGTTTTGAAGTTG HRM2_19250 2177977 - 2177792 - | hypothetical protein TERM 2467 2178089 - 2178046 - H 74 -4.6 -4.89063 | gap 2 TGAGGGAAAAATAAA GGAGCCCCC-TC-ACGTTCT TTGGCC AGTTCGTCGATGGGAGCTCC TGCCACTATAACCCT TERM 2468 2178220 - 2178236 + G 70 -4.3 -4.61231 | overlap 2178221 AGCCGGTTGCCCTAT TGCGGGG GGC CGCTGCA TTTTTCCAACTATCA TERM 2469 2178271 - 2178289 + G 70 -4.5 -4.63184 | AAGCCTCGAGGTGGC CCTCCTG AACTG CAAGAGG TTTTTGAAATCCGTT HRM2_19260 2178211 - 2178678 + | hypothetical protein TERM 2470 2179985 - 2179951 - g 77 -10.1 -3.69437 | gap 2, opp_overlap 2179950 2179970 2179978, overlap 2179909 TAACGCGAAAACCAA GACG-CAGCGAC-GCCA CAG TGGCCGTCGCCGGCATC CGTTATGAGTTGCCG HRM2_19270 2178840 - 2180288 + | integrase family protein TERM 2471 2180793 - 2180760 - g 74 -2.5 -5.09225 | gap 1, overlap 2180761 2180792 ATTTGACTCAAAAAA CCTGTTGTTTACCG TTTTATG CGGTG-ACAACAGA CTCCCAGAAAGGTTC TERM 2472 2180822 - 2180804 - g 75 -8.8 -3.89055 | overlap 2180792 2180805 ACAGACTCCCAGAAA GGTTCCGG TCG CCGGAACT GCTACCCCTTGGAAG TERM 2473 2180821 - 2180805 - g 76 -12.3 -2.92951 | overlap 2180792 2180804 CAGACTCCCAGAAAG GTTCCGG TCG CCGGAAC TGCTACCCCTTGGAA exeA1 2180281 - 2181126 + | ExeA1 TERM 2474 2181108 - 2181126 + T 77 -10.4 -3.22884 | opp_overlap 2181108, overlap 2181101 CAGGCCCCGGCAAAA TCAGAAAG ATC CTTTCTGA TTGATGGCTTGCTGA TERM 2475 2181126 - 2181108 - T 91 -10.4 -4.07885 | opp_overlap 2181101 2181108 CAGGCCCCGGCAAAA TCAGAAAG ATC CTTTCTGA TTGATGGCTTGCTGA TERM 2476 2181250 - 2181288 + T 100 -12.5 -4.70626 | gap 1, opp_overlap 2181250 2181247 TAATGCCCTAAATGA TG-GGGGAGGAGCGGTTA TTGA TTGCCGCTCCTCCTCGCA TTTTTACCATTATTC TERM 2477 2181342 - 2181354 + T 71 -9.1 -3.37245 | opp_overlap 2181339 AAAACCCAATACCCA TGCGC GTA GCGCA TTCATCTTCGGATCC HRM2_19290 2182079 - 2181414 - | hypothetical protein TERM 2478 2181648 - 2181658 + g 76 -6.8 -4.50298 | ATCTCCCGATTGTTT CTCC CGA GGAG TTGTTTTTGACTTTA TERM 2479 2181886 - 2181931 + g 76 -3.1 -5.14563 | opp_overlap 2181909 2181910 TTTCCATAAAATGAC TCAATGTCTTTGGCTATGGAC AACT GCCCCAAGCCAGGGCCATAGA TTTTTTCATACGCCC HRM2_19300 2182474 - 2182163 - | hypothetical protein TERM 2480 2182498 - 2182513 + r 78 -9 -3.79396 | CCTATATTATCAGGC GGGCAT AGAA ATGCCC TTGTTCATAATTATT TERM 2481 2182597 - 2182615 + r 73 -5.9 -4.48987 | opp_overlap 2182591 2182588 GTAAAATGACCTGGT GCAGGAC CCTAT GCCCTGC TTTTACTTATGAACA TERM 2482 2182941 - 2182910 - R 100 -13 -3.57561 | TCTCAACCGTTGAAA GGGGTGCTTGCCCA CATA CAGGCAAGCATCCC AGTTAAAACAATCAG HRM2_19310 2183159 - 2182953 - | hypothetical protein cueR 2183412 - 2183161 - | CueR TERM 2483 2183562 - 2183551 - H 70 -5.8 -4.26327 | CATTGACGAAAACAA TGGC AGAT GCCA TAAAATTAATCATTT HRM2_19330 2183608 - 2184210 + | hypothetical protein HRM2_19340 2184499 - 2184993 + | hypothetical protein cyaA1 2184997 - 2185710 + | CyaA1 HRM2_19360 2186469 - 2186314 - | hypothetical protein HRM2_19370 2186857 - 2186483 - | hypothetical protein HRM2_19380 2187041 - 2186850 - | hypothetical protein HRM2_19390 2187954 - 2187142 - | hypothetical protein TERM 2484 2188280 - 2188251 - R 90 -7.1 -5.09245 | CCAAAAGCAGAAAAA GCCACCCAGGG GTGAAATT CCCCAGATGGC CTTAATGATGATGAA HRM2_19400 2188657 - 2188304 - | hypothetical protein TERM 2485 2188712 - 2188690 - R 100 -6.3 -5.60993 | TTGGGCATAAAAAAA CCACTTGCC GGGCT GACAAATGG TTGAAGGTCAATGAA radC1 2189305 - 2188742 - | RadC1 TERM 2486 2189356 - 2189332 - R 100 -9.3 -6.09196 | CTTAAAATAAAAAAA GCCTCCCTGGA GAA TCCAGAAAAGC CTATGATATTGATGA HRM2_19420 2189678 - 2189409 - | hypothetical protein HRM2_19430 2190130 - 2189675 - | hypothetical protein HRM2_19440 2190586 - 2190200 - | hypothetical protein HRM2_19450 2191520 - 2190627 - | hypothetical protein TERM 2487 2191580 - 2191555 - gH 73 -5.4 -4.67038 | TGGTGAAAATGAAAA TGGCCCTCCC GATTAA AGGAAAGCCA ATTATTGATTTTGGT HRM2_19460 2191500 - 2191694 + | hypothetical protein HRM2_19470 2191774 - 2191938 + | hypothetical protein HRM2_19480 2192005 - 2192166 + | hypothetical protein TERM 2488 2192452 - 2192492 + F 87 -5.5 -5.47431 | overlap 2192455 CGAACTGATGATGTC CATTGGTAAGGCAGGGT CCTACCA ACTCTGTCTTACCATTC TTTTTTCTGTCTTAC TERM 2489 2192455 - 2192489 + F 100 -11.6 -4.78477 | overlap 2192452 ACTGATGATGTCCAT TGGTAAGGCAGGGT CCTACCA ACTCTGTCTTACCA TTCTTTTTTCTGTCT TERM 2490 2193371 - 2193381 + G 71 -6.8 -4.15044 | AAGGTTGGAGAACTC CTGG ATG CCAG TTTGTTCGGGCAGGA hsdM2 2192702 - 2194249 + | HsdM2 TERM 2491 2195211 - 2195196 - g 70 -2.6 -5.03314 | GTTATCCCTAAAAAA TTTGAA GGTG CTCAAA CATTCACCACACTCG hsdS2 2194251 - 2195531 + | HsdS2 hsdR2 2195556 - 2198573 + | HsdR2 HRM2_19520 2198577 - 2199272 + | metal-dependent hydrolase family protein TERM 2492 2199284 - 2199256 - T 100 -13.1 -3.99481 | opp_overlap 2199255 2199253 2199252, overlap 2199251 TGGACCAAAAGATAA GCGGGATGAAGCT TTG AGCCGCACCCCGC ATAGTGTTTCCGGAC HRM2_19530 2199952 - 2199305 - | hypothetical protein HRM2_19540 2202615 - 2199973 - | putative selenocysteine protein TERM 2493 2201814 - 2201832 + g 70 -3.1 -4.80737 | overlap 2201816 TGTCTTCATCTGACA TTCGCTT AGCCA GAGCGGA TTCTTTTTTCTGTTC TERM 2494 2202369 - 2202381 + g 81 -6.3 -5.03994 | GGGGCTTTAGGAATC CATCT TGT AGATG TTTTTCTATCTCGGG TERM 2495 2203177 - 2203212 + r 100 -9.7 -6.04324 | opp_overlap 2203177 ATTTGGAATATTTAA CCCGTCTCTTCAGAG CAGAAA CTCTGGGAAGGCGGG TTTTTTGTTTTTTGC TERM 2496 2203661 - 2203643 - R 82 -7.6 -4.53607 | AAAATTATGATAAAA TTTTGAAT TGA ATTCAAAA AAATAATTTTAAAAT HRM2_19550 2203827 - 2203618 - | hypothetical protein HRM2_19560 2203879 - 2204733 + | hypothetical protein TERM 2497 2204765 - 2204795 + T 100 -12.7 -5.093 | gap 1, opp_overlap 2204765 AGCGTTTCTTTTAAA GGCAGGGTCAGAGG AAAT CTTCT-ACCCTGCC TTTTCTTATTTTGCC TERM 2498 2204795 - 2204765 - T 80 -10.5 -3.53091 | gap 1, opp_overlap 2204765 AGCGTTTCTTTTAAA GGCAGGGTCAGAGG AAAT CTTCT-ACCCTGCC TTTTCTTATTTTGCC HRM2_19570 2207303 - 2204940 - | tetratricopeptide repeat protein (TPR family protein) TERM 2499 2206203 - 2206238 + g 95 -2.4 -5.86332 | overlap 2206208 2206214 ATTATCAATGGCGAT GAGGTCTTCAAGGCTC GCCA GTGCCTTTGAGTACTC TTTTTTTTCGATTAA TERM 2500 2207529 - 2207519 - R 77 -8.2 -4.07568 | opp_overlap 2207518 2207519 2207525 GGTCGTCTCCTAAAA GGGC CCG GCCC GTTGTTTGATGCGCC HRM2_19580 2209012 - 2207513 - | sigma-54 dependent DNA-binding response regulator (Fis-family protein) TERM 2501 2208431 - 2208470 + gr 100 -12.3 -3.63515 | opp_overlap 2208436 AGGCTGGGAGGTGGA GGCAATGGACTCCACAT ACCTGA ATATGGATTCCATTGCC TTGTTGCGGGTGACA TERM 2502 2208605 - 2208619 + gr 71 -7 -4.07885 | CACCGAGGCGAGCCG CCCGGG TTC CACGGG TTTTGACAAGAAATC TERM 2503 2208685 - 2208723 + gr 86 -11.7 -3.28712 | gap 1 CAACATCGCTTGAGG CCGTG-ACCACCACCACG GGTA TGTGGGGGTGGTGCTCGG TTATCCGGGCAAGGA HRM2_19590 2210096 - 2208933 - | signal transduction histidine kinase (PAS/PAC domain protein) HRM2_19600 2210132 - 2210386 + | hypothetical protein TERM 2504 2210407 - 2210373 - gT 86 -10.1 -3.91897 | gap 1, overlap 2210374 CCCGGCATCGAGAAA CTCAAGGCCCTTGAGC GGCG GATCAAGGACCTTG-G CATAAACAAAGCGGA TERM 2505 2210407 - 2210374 - gT 76 -10.3 -2.94924 | overlap 2210373 CCGGCATCGAGAAAC TCAAGGCCCTTGAGC GGCG GATCAAGGACCTTGG CATAAACAAAGCGGA HRM2_19610 2210349 - 2210705 + | hypothetical protein TERM 2506 2210800 - 2210783 - T 77 -6.2 -4.7373 | TCATGCCATTAAAAA GCCCCG AGCTGG CAGGGC CGGATGCGCAACCCC HRM2_19620 2211207 - 2210776 - | hypothetical protein TERM 2507 2211691 - 2211707 + G 71 -5.1 -4.43844 | opp_overlap 2211701 CTCATGGGGCCAGTA CTCTCCA AGA TCGAGAG TTTTCTCGATGATGC HRM2_19630 2211259 - 2212242 + | hypothetical protein HRM2_19640 2212262 - 2212639 + | hypothetical protein HRM2_19650 2212843 - 2213628 + | predicted fusion protein (N-terminal response regulator receiver / C-terminal sensory histidine kinase) HRM2_19660 2213625 - 2214068 + | hypothetical protein TERM 2508 2215618 - 2215606 - g 76 -3.4 -5.1675 | CCATCCAGGAAAAAA TGGT GGTTT ACCA GAAACGGGTGGAAGA gumC1 2214483 - 2216129 + | GumC1 HRM2_19680 2216165 - 2217022 + | putative exopolysaccharide biosynthesis protein (protein-tyrosine kinase) TERM 2509 2218294 - 2218280 - g 79 -11.4 -3.53012 | CGCTTTGTGGTGAAA CCCGGT ATA ACCGGG TGGGCTCAGGTTTCC cpsE 2217059 - 2218453 + | CpsE HRM2_19700 2218517 - 2219101 + | periplasmic polysaccharide export protein TERM 2510 2220094 - 2220104 + G 74 -2.4 -5.10208 | overlap 2220086 ATGGGATACAGAGAC GGAC TCT GGCC TTTTTGTTGACCTTG HRM2_19710 2219129 - 2220562 + | hypothetical protein TERM 2511 2220594 - 2220633 + T 71 -10 -2.73338 | opp_overlap 2220594, overlap 2220593 2220626 TAAAAACACATTAAT CCTTGCCGGCATCATGGT TCTG ACCATGGTCGTGGCAGGG CTTTCCAGCCATTCT HRM2_19720 2221915 - 2220983 - | transposase for insertion sequence 801 (transposase 32 family protein) TERM 2512 2221226 - 2221242 + g 81 -5.7 -5.06052 | overlap 2221227 ATAAAGAAATTTTTC TCCGGTC ACG GTCCGGG TTTTGTATTTTTTAG TERM 2513 2221366 - 2221382 + g 70 -4.3 -4.62069 | overlap 2221367 GATAGATGATGGCCT TGTCGCC GTT GCCGACG TTTTTGCAATGAACA HRM2_19730 2222214 - 2222044 - | hypothetical protein xerD3 2222957 - 2222196 - | XerD3 TERM 2514 2222990 - 2223010 + H 76 -7.6 -4.18401 | gap 1 AAGTAACTGGTCAAT GGCGGATGC GTTG GCATC-GCC TTTTCCGGTATATCA TERM 2515 2223399 - 2223387 - g 80 -4.9 -5.2166 | CAACAATGGAAAAAA TATCA ATG TGATA AAGCTGATCCTGGTC HRM2_19750 2223127 - 2223651 + | hypothetical protein HRM2_19760 2223648 - 2224052 + | putative DNA polymerase (beta-like region) TERM 2516 2224317 - 2224336 + GF 79 -10.8 -3.2218 | opp_overlap 2224314 GATGAAAAAAAGTGT CGGCTATA GAAA TATAGCCG TTCATGAATATTCAA HRM2_19770 2224027 - 2224452 + | hypothetical protein TERM 2517 2224493 - 2224480 - g 100 -6.7 -5.75599 | TAAATTAGAAAAAAA TCTGG CCAT CCAGA TCCTGATCCTGACAG HRM2_19780 2224457 - 2225290 + | hypothetical protein HRM2_19790 2225425 - 2225685 + | hypothetical protein HRM2_19800 2225676 - 2226068 + | PIN domain protein (PilT N terminus) TERM 2518 2226324 - 2226305 - g 74 -7.2 -4.1891 | GTCTTGTAAGAGAAA TTCATGAC AGGG GCCATGAA GTTGCCTCCCACGGA HRM2_19810 2226061 - 2226927 + | polysaccharide deacetylase family protein HRM2_19820 2226924 - 2227208 + | hypothetical protein TERM 2519 2227506 - 2227516 + G 89 -2.4 -5.76949 | overlap 2227500 AAGGGGATGCCTGGC GGCC ACA GGGC TTTTTTTTGCGGCTC HRM2_19830 2227220 - 2227903 + | hypothetical protein TERM 2520 2228576 - 2228551 - g 78 -6.1 -4.88405 | opp_overlap 2228555 2228556, overlap 2228555 AATTTCGAAATAAAA TAAAGCGACCC ATTC GGGACGGTTTA AAATGCAAAACAGGC TERM 2521 2228572 - 2228555 - g 70 -2.5 -4.96996 | opp_overlap 2228555 2228556, overlap 2228551 TCGAAATAAAATAAA GCGACCC ATTC GGGACGG TTTAAAATGCAAAAC TERM 2522 2228953 - 2228942 - g 71 -5.8 -4.43309 | TAAGTTTAAGGAAAA GTGG GGTG CCAC ATCGACTCCTCTTCA HRM2_19840 2228121 - 2229119 + | uncharacterized protein involved in methicillin resistance TERM 2523 2230288 - 2230271 - g 70 -2.7 -4.76087 | gap 1, overlap 2230273 CATAGAACAAAGAAA GACGCTTG GAG CAAACG-C AAGAAAATTTGTAAA TERM 2524 2230308 - 2230296 - g 74 -4.9 -4.75309 | GCAAACGCAAGAAAA TTTGT AAA ACAAA AATATAACTGGGAAA HRM2_19850 2229135 - 2230379 + | glycosyl transferase (group I) TERM 2525 2231023 - 2231041 + G 86 -5.2 -5.23316 | opp_overlap 2231012 2231008 2231022 GGAATTGGAATTCAT TCCAAGGC CCC GCTTGGGA TTTTTTGGTCTAATC TERM 2526 2231214 - 2231232 + G 83 -8.8 -4.3467 | AAAAATACCAGGATC TGCCGGCA TTT TGCCAGCA TTTTGATATGGGGCT tuaH 2230382 - 2231521 + | TuaH HRM2_19870 2231585 - 2232646 + | putative O-actetyl transferase HRM2_19880 2232675 - 2234222 + | putative O-antigen and teichonic acid transporter TERM 2527 2234661 - 2234644 - g 80 -2.7 -5.24796 | opp_overlap 2234648, overlap 2234645 CCCAGATAATAAAAA CTGCCTT ATCA AAGACAA GTTTTGATAGGATGG HRM2_19890 2234310 - 2235488 + | hypothetical protein TERM 2528 2235702 - 2235716 + G 70 -2.9 -4.86731 | TGTCAAAAAGTAATT TTGTT GAAAA AACAA TTTTATTTAAAGAAG HRM2_19900 2235611 - 2236180 + | hypothetical protein TERM 2529 2237710 - 2237724 + G 72 -10 -3.41292 | overlap 2237707 ATGGTTCGTGTAGAG TTCCCC AAT GGGGAA TCTTATCTTGCCGAT HRM2_19910 2236318 - 2237934 + | hypothetical protein TERM 2530 2238344 - 2238329 - g 76 -3.2 -5.07053 | AATTATCTTAAAAAA TCGATC CAAG GAACGA CTAACACAATGTGGC TERM 2531 2238548 - 2238538 - g 72 -4 -4.87052 | opp_overlap 2238538, overlap 2238533 TACAAATCAAGAAAA GTTT ACT AAAC TTTTGGTGGGCAACA HRM2_19920 2238311 - 2239411 + | hypothetical protein HRM2_19930 2239667 - 2240980 + | hypothetical protein HRM2_19940 2241149 - 2242429 + | hypothetical protein TERM 2532 2242679 - 2242701 + G 86 -2.7 -5.64274 | ATTCTCAGCTATACA GAGGCAGGA AACTC TTTTGCTTC TTTTTTTGTGCGTGA TERM 2533 2242997 - 2243011 + G 76 -11.4 -3.23447 | overlap 2242995 CTTTGGGTCCTTTAT GGCAGC GAT GCTGCC TCTTATCGGCGTTCA rfaL 2242434 - 2243762 + | RfaL HRM2_19960 2243775 - 2244395 + | TPR-repeat containing protein TERM 2534 2244465 - 2244455 - g 78 -4 -5.08601 | CGATGCTAAGAAAAA TTCA ACC TGAA TTAAGAGTCGTTATT rfaG2 2244433 - 2245566 + | RfaG2 HRM2_19980 2245572 - 2246744 + | glycosyl transferase (group 1 family protein) HRM2_19990 2246758 - 2246997 + | hypothetical protein HRM2_20000 2246994 - 2247284 + | hypothetical protein carB1 2247313 - 2248584 + | CarB1 HRM2_20020 2248596 - 2249600 + | putative polysaccharide deacetylase family protein HRM2_20030 2249625 - 2251001 + | putative coenzyme F390 synthetase FtsA dppA1 2251801 - 2251013 - | DppA1 HRM2_20050 2251850 - 2252833 + | hypothetical protein HRM2_20060 2253428 - 2253000 - | hypothetical protein TERM 2535 2253397 - 2253364 - G 82 -10.5 -3.83026 | opp_overlap 2253364 2253374, overlap 2253385 CCCTGGGAGAGCAAA TTATCGAAATTACCA AAAA TGGTATTTCCGATAA TTTCGGATATGCGGT TERM 2536 2254223 - 2254237 + G 87 -4.2 -5.51046 | overlap 2254225 CATCCATGGCATTGG TGGCTG GTT CAGCGA TTTTTTGTATATTTG TERM 2537 2254318 - 2254294 - g 80 -2.9 -5.32599 | opp_overlap 2254294, overlap 2254297 CATAAAACACAAAAA TGAGTTTAAAA CGT TTTTATACGCA GCTTTTTTTGTGGCA TERM 2538 2254407 - 2254419 + G 73 -9.1 -3.65991 | TTGCAAACCCCATGA CCAGC TGG GCTGG TTGTCTTGCAGCAGT TERM 2539 2254475 - 2254504 + G 74 -2.3 -5.1104 | opp_overlap 2254484, overlap 2254484 AGAATGTCTGTCAGA AAAAAAATGGATA TTGC TATCTGTTTTTTA TTTTTGTATCTGTTT TERM 2540 2254644 - 2254661 + G 91 -3.4 -5.7946 | CGCTTAACCACGCAA GGCTTT TTATGC AGAGCC TTTTTTTGTTGGGAA HRM2_20070 2253605 - 2254879 + | putative VanZ-like membrane protein TERM 2541 2254927 - 2254937 + G 74 -6.8 -4.2828 | AATTCGATTTGCAGC GGTC GGG GACC TTTTGCTGACTGCGC capA 2254889 - 2255977 + | CapA TERM 2542 2258546 - 2258556 + G 76 -8.2 -4.24342 | AAAATGTGATAATTG CCGG GAA CCGG TTTATTGGTGGAAGC TERM 2543 2258689 - 2258673 - g 85 -3.7 -5.39721 | opp_overlap 2258677, overlap 2258619 2258676 2258677 TCAGGAGACAAAAAA TAAGCTT TTC AAGCCCA GCCAGAAAGGTCATT TERM 2544 2258686 - 2258676 - g 76 -5.4 -4.77122 | opp_overlap 2258677, overlap 2258673 2258677 GGAGACAAAAAATAA GCTT TTC AAGC CCAGCCAGAAAGGTC pyrK 2255974 - 2259126 + | PyrK cysK 2259144 - 2259335 + | CysK HRM2_20110 2259419 - 2259700 + | transposase (class V family protein) istA1 2259681 - 2260529 + | IstA1 TERM 2545 2260641 - 2260613 - f 70 -7.4 -3.74626 | opp_overlap 2260612 ACCAAAGTATGGAAA GGGCAGTGCG TGGTGTAAC CTCACTGCCC CTATACTTCAGTCAC TERM 2546 2261653 - 2261639 - g 78 -2.1 -5.28176 | TTGACCCAGAAAAAA GAGTT GTTTA AACCC AATAAAAGCGAAAGC cysS1 2260970 - 2262976 + | CysS1 TERM 2547 2263200 - 2263232 + G 100 -10.6 -5.09204 | CATTTTCACGATTAA GGGTCAATACTGCC AAAGG GGTGGTGTTGGCCC TTTTTATTACCATCT HRM2_20140 2263004 - 2263426 + | VanZ-like family protein TERM 2548 2263434 - 2263424 - f 70 -2.6 -5.00267 | overlap 2263420 AAGTATAAAAATAAA TAAA GCA TTTA CCCAGGAGGCAGGCA TERM 2549 2264566 - 2264541 - g 71 -6.7 -4.13767 | opp_overlap 2264541 TTCGGTATTCGAAAA CCCGGGGCGGA TATG TCCGACTCGAG GGCAAAAGGATAAAT HRM2_20150 2263451 - 2264743 + | metallo-beta-lactamase family protein (RNase) HRM2_20170 2266616 - 2265852 - | putative long-chain N-acyl amino acid synthase HRM2_20160 2265026 - 2265925 + | putative N-acyl-L-homoserine lactone synthetase TERM 2550 2266137 - 2266155 + gF 85 -7.4 -4.8622 | opp_overlap 2266137 CATAGCCTGGTATAA CCCCAGTA CAA TAATGGGG TTTTTCCTTCCCAGC TERM 2551 2266797 - 2266807 + FH 82 -6.8 -4.85782 | opp_overlap 2266793 2266796, overlap 2266793 2266792 CACCATACATACCAT TCCC AAT GGGA TTTGTTTTTACGGAA HRM2_20180 2266842 - 2268881 + | putative dinucleotide-utilizing biosynthesis family protein (molybdopterin and thiamine biosynthesis family protein) TERM 2552 2268932 - 2268918 - g 71 -5.7 -4.42667 | opp_overlap 2268921, overlap 2268920 GCAAAATTATGAAAA CGGTT GTTCA AACCG AACAAGTTTCAAAAA TERM 2553 2268938 - 2268948 + G 78 -4 -5.14563 | opp_overlap 2268938 GTTCAAACCGAACAA GTTT CAA AAAC TTTTTTGCTGGGCAA TERM 2554 2269652 - 2269620 - g 100 -6.6 -6.23209 | gap 2, overlap 2269609 2269621 CGAATCAAAAAAAAA CTTT-T-TCTTCTGAG AAT CTCAGAAGAGAGAAAG GCAGAAGGGACTTTG TERM 2555 2269649 - 2269621 - g 76 -7.5 -4.31485 | overlap 2269609 2269620 GAATCAAAAAAAAAC TTTTTCTTCTGAG AAT CTCAGAAGAGAGA AAGGCAGAAGGGACT lolD2 2268911 - 2269675 + | LolD2 TERM 2556 2270449 - 2270435 - g 76 -5.7 -4.7339 | overlap 2270436 AAGAAATTTTAAAAA CCATC CAGTC GATGG ATGCAGAACTCGAAA lolE 2269681 - 2270937 + | LolE TERM 2557 2271453 - 2271436 - g 80 -2.7 -5.22312 | ACTGACAGCAAAAAA TGAAAAG GTGA CTTATCA TAAAGTAAAACTCTG lolF 2270957 - 2271712 + | LolF TERM 2558 2271794 - 2271810 + G 78 -2.3 -5.27938 | TTAATCGCCTTGATA TTGACAT GTA ATGTAAA TTTTTGTTTGGCCCT TERM 2559 2272450 - 2272462 + G 70 -3.3 -4.81212 | TAATTTATCCTATAC CATGG GTT CCAGG TTTTCTTATGATGCG TERM 2560 2272930 - 2272945 + G 73 -3.2 -5.06016 | overlap 2272932 CATCCTAACCGATGG TTGGGA CATG TCCCTA TTTTATTTATATGAT TERM 2561 2273207 - 2273221 + G 86 -5.7 -5.07107 | CTTGACTGGCTCCTT GGTGT TGATT ACACC TTTTTTAACGCTTTG HRM2_20220 2271734 - 2273548 + | hypothetical protein HRM2_20230 2274847 - 2273585 - | UDP glycosyltransferase family protein TERM 2562 2274911 - 2274871 - R 100 -12.9 -4.31433 | opp_overlap 2274878 2274879, overlap 2274879 TACTGTTATAATAAA TACAAAAAGGAGAGATG GAAACCT CATCTCTCCCTTTTATA ACTATTTAATAACTA TERM 2563 2274878 - 2274904 + r 78 -7.3 -4.48877 | opp_overlap 2274871 2274879, overlap 2274879 ATAATAAATACAAAA AGGAGAGATGG AAACC TCATCTCTCCC TTTTATAACTATTTA TERM 2564 2274903 - 2274879 - R 100 -10.1 -5.28414 | opp_overlap 2274878 2274879, overlap 2274871 TAATAAATACAAAAA GGAGAGATG GAAACCT CATCTCTCC CTTTTATAACTATTT TERM 2565 2274879 - 2274903 + r 81 -10.8 -3.28242 | opp_overlap 2274879 2274871, overlap 2274878 TAATAAATACAAAAA GGAGAGATGG AAACC TCATCTCTCC CTTTTATAACTATTT HRM2_20240 2275857 - 2274934 - | hypothetical protein TERM 2566 2276076 - 2276062 - H 70 -7.2 -3.83998 | opp_overlap 2276061 2276062 TTACGGGAGATTAAA CTTGAA TTT TTCAAG ATATTATAATAAACG TERM 2567 2276089 - 2276118 + H 73 -8.5 -3.66658 | opp_overlap 2276090 2276092, overlap 2276087 2276090 2276092 AAGATATTATAATAA ACGTCACCGGCCT ATGG GGGCTGGTGATGG TGTTTTAAAAGTGTT TERM 2568 2276117 - 2276090 - H 74 -6.9 -4.38273 | opp_overlap 2276090 2276089 2276087 2276092, overlap 2276092 AGATATTATAATAAA CGTCACCGGCC TATGGG GGCTGGTGATG GTGTTTTAAAAGTGT TERM 2569 2276090 - 2276117 + H 83 -12 -2.79272 | opp_overlap 2276090 2276092, overlap 2276089 2276087 2276092 AGATATTATAATAAA CGTCACCGGCCT ATGG GGGCTGGTGATG GTGTTTTAAAAGTGT TERM 2570 2276092 - 2276115 + H 79 -11 -2.93891 | opp_overlap 2276092 2276090, overlap 2276090 2276089 2276087 ATATTATAATAAACG TCACCGGCCT ATGG GGGCTGGTGA TGGTGTTTTAAAAGT TERM 2571 2276338 - 2276356 + H 73 -5.3 -4.59774 | opp_overlap 2276337 2276338 AAATGCTTCCCAAAC CCATTAG TAGGC CTGATGG TTTATCTTTTCTTTG TERM 2572 2276763 - 2276705 - H 70 -2.9 -5.04385 | gap 1, opp_overlap 2276708 2276738, overlap 2276706 GAGATTTGGAAAAAA GGATATTTAATTCATATAAATTGTGTAA TTTT TTTCATATTTT-TATGAATTAAATATCT TAGGGACGCAGAAAT TERM 2573 2276808 - 2276833 + H 73 -9.1 -3.56558 | gap 1, opp_overlap 2276808 AAAAAGGCTCTAACA TGTTCAAGCACC CAT GGTGC-TGGACA TTATCTCGATTATAG TERM 2574 2277594 - 2277577 - g 70 -4.8 -4.67641 | AGCGTAAAATTAAAA GGACCG GCCAGG CGATCC CAGGAAGACATCAAT TERM 2575 2277895 - 2277885 - g 76 -8.2 -4.15577 | GGAACAATTAAAGAA CGGG AAT CCCG GAGATTTTGGAATAA HRM2_20250 2277088 - 2278152 + | homeodomain-like insertion element (DNA transposition) TERM 2576 2278314 - 2278304 - f 73 -5.4 -4.73388 | opp_overlap 2278304, overlap 2278306 AATTCCGATCAAAAA GACA AGG TGTC TTGATAATGTGTTAA HRM2_20260 2278372 - 2278854 + | putative transposase HRM2_20270 2279056 - 2279274 + | hypothetical protein HRM2_20280 2281565 - 2279280 - | tetratricopeptide (TPR) domain protein TERM 2577 2281021 - 2281042 + g 89 -10.3 -4.30576 | AGCAGGGCTTCTGCC TGTTCAAAC TCCT GTTTGAACA TTTTAATCCTGGCAA TERM 2578 2281882 - 2281903 + GH 100 -4.3 -5.80364 | CAGCTGGATCTGAAG GGGTTGTCG TCCC CCCCAACCC TTTTTTTGTTCCCGT TERM 2579 2282368 - 2282347 - gH 93 -13.7 -2.82786 | opp_overlap 2282346 2282355 2282357, overlap 2282344 ACAGTACACCAACCA CCCAGGGAG TGGT CCCCCTGGG ATCTGCTTCTAATAC TERM 2580 2282456 - 2282471 + GH 71 -5.4 -4.47049 | overlap 2282438 CCACCGGTTGGAGGC TGTCCT TTAT GGGACA TTTCTATTTCTCTTT HRM2_20290 2281725 - 2282525 + | hypothetical protein TERM 2581 2283670 - 2283658 - gf 100 -7.7 -5.24531 | ATCCTGTATAAAAAA GGGAA ATA TTCCC TGGGTCTTGACTACT TERM 2582 2284496 - 2284477 - gf 82 -3.5 -5.34555 | opp_overlap 2284488, overlap 2284480 GCATACTACAAAAAA GGAGCCT TTTCCC AGGCTGC CGGGCTTCTTGCCTC TERM 2583 2284628 - 2284615 - gf 78 -2.3 -5.30575 | overlap 2284617 GAAAAATTGAAAAAA GCCGC TAAA ACAGC GCTTGGGGAGGCAGA HRM2_20300 2282464 - 2284830 + | tetratricopeptide (TPR) domain protein TERM 2584 2285374 - 2285364 - g 70 -4.6 -4.59853 | CCAACGGTGCAAAAA CGCC TAT GGCA TGTCCGTGATCTACC gyaR 2284840 - 2285841 + | GyaR HRM2_20320 2286973 - 2286023 - | permease of the drug/metabolite transporter (DMT) family TERM 2585 2287528 - 2287505 - g 70 -10.2 -2.98823 | gap 1, opp_overlap 2287504 2287503 TCCCCTGTATATAGA CCGGCTGGCCC ACG GGGCC-GACGG CATTGTGCTGATCAA TERM 2586 2287724 - 2287714 - g 72 -4 -4.82901 | opp_overlap 2287714 GGCTTTTGACAAAAA CAAA ATT TTTG TTTGGTGTGGCCCTG HRM2_20330 2287092 - 2288366 + | hypothetical protein hisC1 2288726 - 2289859 + | HisC1 glnH2 2289934 - 2290686 + | GlnH2 TERM 2587 2291248 - 2291261 + G 74 -2.3 -5.13521 | overlap 2291230 2291249 GCCGTTGCTGGCTTT TGGCA CGGC TGCCC TTTTTTACATCCTTT glnP4 2290697 - 2291338 + | GlnP4 glnQ4 2291398 - 2292147 + | GlnQ4 TERM 2588 2292331 - 2292342 + G 74 -7.2 -4.26344 | ACCTGACCCTTTTCC GGGG AACA CCCC TTTTGGTACAGCTCT glnP5 2292144 - 2292824 + | GlnP5 TERM 2589 2293022 - 2293004 - g 82 -10.2 -3.93288 | overlap 2293007 TTTGATGCAAGTAAA CAGCGGGC ATT GCCCGATG CCGTGGTTTTCCCCC TERM 2590 2293254 - 2293276 + G 76 -7.7 -4.36914 | gap 1 CCGCCCTTCTCCAGG CAGCTGCGGC CAAG GCCG-GGCTG TTTTATCCGCCCGAC glcD3 2292890 - 2294320 + | GlcD3 TERM 2591 2294682 - 2294664 - g 76 -8.1 -4.19735 | CCTTCCAAAAGTAAA GGCCCTG GCGTT CAAGGCC CTGGGAACCGACAGA glcF2 2294341 - 2295648 + | GlcF2 HRM2_20410 2296447 - 2295620 - | hypothetical protein TERM 2592 2296206 - 2296181 - G 85 -3.9 -5.42605 | opp_overlap 2296182, overlap 2296182 GTAAGAAAAATAAAA GTGGCCAAGCT TGTC AGCTCCGCCAT GCTTACTATCTTCTT TERM 2593 2296763 - 2296799 + r 100 -12.4 -5.16572 | gap 1, opp_overlap 2296769, overlap 2296769 CCCAGGCACCATTGA ACATAAGGGCTCAGCCG GATT TGGCTGAGCCCTT-TGA TTTTTTGGATTCCCT TERM 2594 2296769 - 2296794 + r 100 -16.9 -4.43669 | opp_overlap 2296769, overlap 2296763 CACCATTGAACATAA GGGCTCAGCCG GATT TGGCTGAGCCC TTTGATTTTTTGGAT TERM 2595 2296794 - 2296769 - R 100 -16.2 -3.69702 | opp_overlap 2296763 2296769 CACCATTGAACATAA GGGCTCAGCC GGATTT GGCTGAGCCC TTTGATTTTTTGGAT fadD4 2298522 - 2296873 - | FadD4 TERM 2596 2298544 - 2298568 + r 71 -9.1 -3.3506 | overlap 2298567 TGCCTCCTTGGGTTG CGCTTCGGGCC ATC GGGCCGGTGCG TTGTAAACGTTTCCC TERM 2597 2298646 - 2298657 + r 81 -4.4 -5.37345 | opp_overlap 2298646 2298638, overlap 2298638 CAACACATAAAAAAC GAAC GATC GTTC TTTTTTATACTTGAA HRM2_20440 2300604 - 2298889 - | two component protein (transcriptional response regulator/sensory box) TERM 2598 2299170 - 2299191 + g 82 -6.5 -4.77036 | AGTTTTTCTTTCCGC TGGGATAGC CTGT GCCGTCCCA TTTTTCATGATGAAA TERM 2599 2299289 - 2299299 + g 70 -4.6 -4.61566 | GCATCCCCTCCGTAT CGGC AAT GCTG TTTTATAATTTCAAA TERM 2600 2300280 - 2300268 - G 79 -7.7 -4.5528 | overlap 2300272 TAAAAGCAACCAAAA GGCAT ATC ATGCC GACATAATAAAAGGA HRM2_20450 2302106 - 2300619 - | two component protein (cAMP receptor domain/SAM dependent regulatory domain) TERM 2601 2301399 - 2301416 + g 79 -5.6 -4.93696 | opp_overlap 2301399 AAAAGTTTCTTTAAA CAGGTA GCCCCA TACCTG TTTTTCATATTTAGA TERM 2602 2302377 - 2302351 - H 100 -18.8 -5.76237 | opp_overlap 2302351 CACAGAAACAAAAAA GGCCCCCAGTGA AAA TCACTGGGAGCC TTGTTGTTAAATGGT TERM 2603 2302351 - 2302377 + H 100 -16.6 -3.97709 | opp_overlap 2302351 CACAGAAACAAAAAA GGCCCCCAGTGA AAA TCACTGGGAGCC TTGTTGTTAAATGGT TERM 2604 2302548 - 2302537 - H 75 -2.2 -5.33985 | TTTAAAAAAAATAAA CAGA TTGA CCTG AAATCGGCTGTTTGG hemL 2302618 - 2303904 + | HemL TERM 2605 2304947 - 2304981 + G 74 -12 -2.74605 | overlap 2304971 GATTTTGCCCATCAC CCGACGGCTGTCAGGG AAA CCCTGCGGGCCGTCCG TCCGTTTTACACCCA mpl 2303906 - 2305324 + | Mpl HRM2_20490 2305327 - 2305518 + | hypothetical protein HRM2_20500 2305540 - 2305971 + | methyl-accepting chemotaxis protein (Hemerythrin family protein) TERM 2606 2306617 - 2306629 + G 71 -6.2 -4.35885 | AACGGATGACCTGGT GCCC CGGAC GGGC TTTCTTATCCTGGAT TERM 2607 2306701 - 2306689 - g 71 -7.7 -4.02334 | TATTGAGACCATAAA GCAGT TTG ACTGC AGGTACATGCTCGGT HRM2_20510 2305994 - 2307394 + | ATP-dependet DEAD/DEAH box helicase TERM 2608 2308656 - 2308670 + G 77 -10 -3.71649 | opp_overlap 2308665, overlap 2308666 TATCGGTATCTATTT TGCCAC AGA GTGGCA TTTGCCATTTACCAC HRM2_20520 2307478 - 2308971 + | putative signal transduction protein HRM2_20530 2309949 - 2308984 - | hypothetical protein TERM 2609 2309914 - 2309928 + g 76 -2.8 -5.13343 | CAACTGTCTCAATGT CTCATT TTT GATGGG TTTTATTTTAGCTTC TERM 2610 2310033 - 2310012 - R 76 -9.5 -3.53444 | overlap 2309997 GGATTGGTTTTCAAA TCCCGTTGT CGTG ACAACAGGA CCAAAGTAAAGCAAA HRM2_20540 2310195 - 2310007 - | hypothetical protein HRM2_20550 2311739 - 2310381 - | sigma-54 dependent two component DNA-binding response regulator (Fis family protein) TERM 2611 2311044 - 2311029 - G 86 -5.4 -5.33405 | gap 1, opp_overlap 2311030, overlap 2311023 2311030 TTCATCAAAGAAAAA GGTCCCA TTC TGGG-CC TGTTCCAAAAATCCT TERM 2612 2311050 - 2311065 + g 76 -4.8 -5.00616 | ATTCTGGGCCTGTTC CAAAAA TCCT TTTTTG TTTTTTGCAGCACCG TERM 2613 2311621 - 2311610 - G 95 -2.2 -5.86332 | overlap 2311612 CCAAGTCAAAAAAAA CAGC GGTA ACTG CAGCCTGTGCCTCAG HRM2_20560 2312327 - 2311782 - | hypothetical protein TERM 2614 2312165 - 2312181 + gr 72 -8 -3.85554 | opp_overlap 2312163, overlap 2312155 2312164 TATTCTCCACGAACT CCTGGA TGGTT TCCAGG TATTTATTCTCTTTG HRM2_20570 2313721 - 2312264 - | signal transduction histidine kinase TERM 2615 2312444 - 2312434 - GR 82 -4 -5.31456 | opp_overlap 2312434, overlap 2312427 TGAATTTATAAAAAA TCTT TTC AAGA TGTTCAGGTTTGATT TERM 2616 2312639 - 2312625 - GR 73 -10 -3.03635 | CAAACGTCTGGAAGA TCCTCC TGG GGAGGA GAAAATTCAAGATCA TERM 2617 2313873 - 2313849 - R 100 -14.3 -5.7946 | opp_overlap 2313849 2313844 GTTGTAACAAAAAAA GGGCTCAGCCC GAA AGGCTGAACCC TTGAATTGTCTGGTG TERM 2618 2313849 - 2313873 + r 86 -11.4 -3.27164 | opp_overlap 2313849, overlap 2313844 GTTGTAACAAAAAAA GGGCTCAGCC CGAAA GGCTGAACCC TTGAATTGTCTGGTG HRM2_20580 2314048 - 2313830 - | hypothetical protein TERM 2619 2313983 - 2313995 + g 73 -9.1 -3.78998 | ACCCTTAACTGACGC GGCTC TCA GAGCC TTACTTTTGGTTTCG TERM 2620 2314102 - 2314076 - R 70 -9.4 -2.75993 | opp_overlap 2314076, overlap 2314075 GTAGGCACAGATAAT GGTCAGGGGA GAAACAA TCCCCTGGCC TATCTCACAATGAAA TERM 2621 2314076 - 2314102 + r 81 -11.6 -2.88544 | opp_overlap 2314076 2314075 GTAGGCACAGATAAT GGTCAGGGGA GAAACAA TCCCCTGGCC TATCTCACAATGAAA HRM2_20590 2314344 - 2314171 - | hypothetical protein HRM2_20600 2314516 - 2314346 - | hypothetical protein TERM 2622 2314601 - 2314620 + r 81 -10.8 -3.34233 | overlap 2314591 2314595 2314592 2314611 TGTGTGTCACAGGGT GCCTGTAA TCTG TTACAGGC TTGTAACGCTTGTAA HRM2_20610 2316057 - 2314852 - | hypothetical protein TERM 2623 2315269 - 2315288 + g 74 -3.6 -4.91852 | GTCTTCCTCTGATAT TGTTCCAT CTTC ATTGAACA TTTCTTTTTGATCAG HRM2_20620 2317994 - 2316057 - | ATP-dependent DNA excision repair protein (helicase superfamily) TERM 2624 2316165 - 2316187 + g 73 -6.3 -4.55287 | overlap 2316166 ATTAGGTTCCCGCCC ATGGACCTT GATAA AAGGTCCAA TTTTGTCTCGATAAA TERM 2625 2316166 - 2316186 + g 70 -9.8 -3.3269 | overlap 2316165 TTAGGTTCCCGCCCA TGGACCTT GATAA AAGGTCCA ATTTTGTCTCGATAA HRM2_20630 2320642 - 2318006 - | putative type II restriction enzyme (methylase subunit) TERM 2626 2318724 - 2318734 + g 79 -6.8 -4.67048 | opp_overlap 2318723 2318724 TTTTTTAAAAAGCAC CCAG CTT CTGG TTTGTTTTCCAATAG TERM 2627 2321447 - 2321472 + GH 73 -5.4 -4.67038 | ACCAGAATCAACAAT TGGCTTTCCT TTAATC GGGAGGGCCA TTTTCATTTTCACCA HRM2_20640 2321316 - 2321603 + | hypothetical protein HRM2_20650 2321507 - 2322400 + | hypothetical protein TERM 2628 2322410 - 2322394 - f 87 -6.5 -5.1356 | overlap 2322395 TCTCATCAATAAAAA CGGCTGA AAT CCAGCCA TAATCACCAACACAA TERM 2629 2322409 - 2322395 - f 70 -7.8 -3.67413 | overlap 2322394 CTCATCAATAAAAAC GGCTGA AAT CCAGCC ATAATCACCAACACA HRM2_20660 2322441 - 2322827 + | hypothetical protein HRM2_20670 2323007 - 2323351 + | hypothetical protein TERM 2630 2323438 - 2323462 + F 100 -11.5 -6.09196 | opp_overlap 2323437 TCATCAATACCATAG GCTTTTCTGGA TTC TCCAGGAAGGC TTTTTTTATTTTAAG radC2 2323489 - 2324052 + | RadC2 TERM 2631 2324082 - 2324104 + F 100 -6.3 -5.60993 | TTCATTGACCTTCAA CCATTTGTC AGCCC GGCAAGTGG TTTTTTTATGCCCAA HRM2_20690 2324137 - 2324490 + | hypothetical protein TERM 2632 2324513 - 2324542 + F 90 -7.1 -5.09245 | AACGACATTCAGGAA GCCATCTGGGG AATTTCAA CCCTGGGTGGC TTTTTCTGCTTTTGG HRM2_20700 2324819 - 2325217 + | hypothetical protein dnaG10 2325518 - 2325889 + | DnaG10 TERM 2633 2326103 - 2326120 + G 74 -9.9 -3.61715 | opp_overlap 2326102 2326101 AGGTTATCAACAATC TGTCTCC AATT GGAGACA TTCTTCCCAACAATG HRM2_20720 2325889 - 2326470 + | hypothetical protein TERM 2634 2326564 - 2326547 - gf 80 -2.6 -5.52023 | overlap 2326548 ATCATGAACAAAAAA GGCTCG GCCAAA CGAGCA AGTAAAAAATATTAC TERM 2635 2326613 - 2326599 - gf 86 -5.6 -5.28683 | opp_overlap 2326612 ATCAATATCAAAAAA CCGGCA TTA TTCCGG GGCCACTCCTACTTG TERM 2636 2327891 - 2327875 - gf 76 -5.1 -4.83169 | ATTGCCGGACAAAAA TGAGCTG GAT CAGATCA TCGCCTTTTTGGAGC TERM 2637 2327987 - 2327957 - gf 80 -2.4 -5.47914 | AAAAATTATAAAAAA GGTCTTTCCATGCC CAT GGCAAAGCAAATCC TTCAGCATAACCAGA HRM2_20730 2326457 - 2328145 + | hypothetical protein HRM2_20740 2328069 - 2328815 + | putative ATPase involved in DNA replication/transposition TERM 2638 2328941 - 2328972 + F 100 -11.1 -5.27938 | gap 1, opp_overlap 2328938 2328943 2328945 ATAATTAAATCAGGA TAGACCATTACGCT TTTTT AGCG-AATGGTCTA TTTTTGTTTACAACT TERM 2639 2328970 - 2328943 - f 71 -9.3 -2.90456 | gap 1, opp_overlap 2328941, overlap 2328938 2328945 AATTAAATCAGGATA GACCATTACGCT TTTTT AGCG-AATGGTC TATTTTTGTTTACAA HRM2_20750 2329434 - 2329880 + | hypothetical protein HRM2_20760 2330343 - 2330666 + | hypothetical protein HRM2_20770 2330675 - 2331004 + | hypothetical protein TERM 2640 2331245 - 2331255 + T 78 -2.4 -5.42259 | AGGGTTTGGGCCAGA GACG TCA CGGC TTTTTTTAAGACTGC HRM2_20780 2333599 - 2331317 - | tetratricopeptide (TPR) domain protein TERM 2641 2331366 - 2331382 + g 76 -4.4 -5.00616 | gap 1, overlap 2331366 2331367 GCCCCATCAAAATCT G-CCTGG AGTT CCAGGGC TTTTTTCAAAGCGGC TERM 2642 2332121 - 2332134 + g 85 -3.9 -5.50313 | opp_overlap 2332121 AATTGTATTAAAATA TTGAA GCGC TTCAA TTTTTTCCTTTTGTA TERM 2643 2333043 - 2333056 + g 100 -3.8 -5.94713 | GTCTTTAATGCCTTT TGGG CAGCAT CCCA TTTTTTTTCTGCAAT TERM 2644 2333439 - 2333451 + g 70 -2.7 -4.81851 | overlap 2333429 TCCAGCTGGATAGCG TTCAG ATA TTGAA TTTTTGCCTTTCCAT TERM 2645 2333720 - 2333698 - R 100 -12 -5.7946 | opp_overlap 2333698 CTGCCAATAAAAAAA GGGCAGGATG TTA CATCCTGTCC TTTTTAAATATCCGT TERM 2646 2333698 - 2333720 + r 100 -14.2 -4.71061 | opp_overlap 2333698 CTGCCAATAAAAAAA GGGCAGGATG TTA CATCCTGTCC TTTTTAAATATCCGT HRM2_20790 2334585 - 2333749 - | hypothetical protein TERM 2647 2333945 - 2333930 - G 73 -3.2 -5.02323 | GCAGTAGAAACAAAA GTCCCA CCGG TGGCAC CAAATGTATACCCTC TERM 2648 2334357 - 2334338 - G 74 -4.2 -4.85599 | overlap 2334340 TTGATCCCATAAAAA GTTGCCTG GATC CAGACATC GCAGTCAGGGCATGC TERM 2649 2335493 - 2335470 - R 73 -8.3 -3.60098 | opp_overlap 2335463 2335460 2335459 ACTGTTTAGGGTAAA TTTTACCCT GGGTTT AGGGTAAAA ATTACGCCCATAGAA HRM2_20800 2336923 - 2335544 - | transposase (IS4 family protein) TERM 2650 2335984 - 2335996 + g 84 -4.8 -5.24129 | opp_overlap 2335984 CTGTTGATAAAAAGG CGAG CCATC CTCG TTTTTTATCACAGGG HRM2_20810 2337414 - 2337668 + | HTH-type transcription regulator TERM 2651 2337887 - 2337919 + F 76 -11.2 -2.53263 | TAAAAAGGATTTAGC CGGGCACCTGATCC ATTTA GGAACGGGTGCCCA TCACTTCAACCTGAA HRM2_20820 2337986 - 2339797 + | hypothetical protein TERM 2652 2339858 - 2339840 - f 70 -7.4 -3.75153 | overlap 2339852 TTGTGGTAATTCAAA CCGGAGAA TAA TTCCCCAG GGTCATCCCAGAAGA TERM 2653 2340225 - 2340244 + F 79 -10.8 -3.15999 | overlap 2340230 ACTCATTCCAGTTTG GTGTTTCC ACGT GGAAACAC TTGGGTATCTCGGAG TERM 2654 2340373 - 2340358 - f 95 -7.6 -5.09426 | TTCAACTTCAAAAAA GTTTCC ACGT GGAAAC CCTAACACAATTTCA TERM 2655 2340489 - 2340474 - f 76 -7.6 -4.17048 | overlap 2340471 CCTGGCTGAAAAGAA GTTTCC TCGT GGAAAC AAATTCCAGTATCCC TERM 2656 2340566 - 2340551 - f 95 -7.6 -5.0133 | GATTCCGTTAAAAAA GTTTCC TCAT GGAAAC CCATGACACAGGAGA TERM 2657 2341521 - 2341534 + G 70 -2.3 -5.00616 | opp_overlap 2341521 AAATTTACCCAGAAG GATGC AAAA GCCTC TTTTTTACCAAAACC TERM 2658 2341905 - 2341891 - g 76 -2.8 -5.20222 | ATGAAATAAATAAAA TCAAAG AAA CGTTGA TCAACTATTATAAAA HRM2_20830 2340588 - 2342816 + | sigma-54 dependent two component DNA-binding response regulator (Fis family protein) TERM 2659 2342891 - 2342867 - f 74 -9.5 -3.31415 | overlap 2342862 TACTATTAAATTCAA TATTACATTCA ACT CGAATGTAATA GCAAACCCCACCTTT TERM 2660 2343047 - 2343036 - f 89 -3.6 -5.59962 | TAAAACAAACAAAAA CGGG CCGG CCCA AAACTTATTTAAAGA TERM 2661 2344103 - 2344064 - g 70 -8 -3.78953 | gap 1 ACCTCCAGGATGAAA TCAT-CTGGGTGAAGGACT CCA ACTCATTCACCCAGGACGA TGCAGTCAACTATAC HRM2_20840 2343076 - 2344668 + | two component protein (ParB-like partition domain/site-specific DNA modification methylase) TERM 2662 2344679 - 2344707 + F 100 -13.9 -3.28712 | opp_overlap 2344679 2344697 CCTAAACCATAACGA GGGGCGGGGGATT CCA AATCCTCTGCTCC TTCTGAAACGGAGGA TERM 2663 2345232 - 2345220 - g 85 -7.7 -4.84017 | overlap 2345231 AAGTCTTTACAAAAA GCTCT GCA AGAGC TTCAGGTGAAAGCGA HRM2_20850 2344953 - 2345273 + | hypothetical protein TERM 2664 2345322 - 2345296 - f 95 -7.2 -5.49809 | opp_overlap 2345296 TAAACCTTAAAAAAA TGCCTCCGATAC TAA ACACCGGGGGCA TTCTTAATTCCAAGA TERM 2665 2345389 - 2345370 - f 87 -5 -5.46706 | overlap 2345373 ATGGGAAAACAAAAA TATTCAGC ATGG GCTGACTA ACGTCAGCAACATGC TERM 2666 2345878 - 2345865 - g 74 -6.7 -4.30719 | overlap 2345867 2345874 TTGGGGCACAACAAA CACCA CCAA TGGTG GACAGGGTTCCCCAC TERM 2667 2345879 - 2345867 - g 73 -9.1 -3.75817 | overlap 2345865 2345874 GGGGCACAACAAACA CCACC AAT GGTGG ACAGGGTTCCCCACA TERM 2668 2346131 - 2346106 - g 70 -3.3 -4.81083 | gap 1, opp_overlap 2346120 CGGAACTACCAAAAA CAAGGAAGGACG CAC CATC-TACCTTG ATGACGAGCTGATGG HRM2_20860 2345444 - 2346526 + | phage integrase protein (DNA breaking and rejoining enzyme) TERM 2669 2346532 - 2346505 - T 100 -13.5 -4.76041 | opp_overlap 2346505 CACAGTCATTAAAAA GGGCTTCCAGC GAAAAT GCTGAAAGCCC TTTAAAATCTGGTGC TERM 2670 2346505 - 2346532 + T 93 -12 -3.64599 | opp_overlap 2346505 CACAGTCATTAAAAA GGGCTTCCAGCG AAAA TGCTGAAAGCCC TTTAAAATCTGGTGC HRM2_20880 2347414 - 2346662 - | hypothetical protein TERM 2671 2347807 - 2347825 + G 80 -4.5 -5.06414 | opp_overlap 2347807 GTTGAAAAAAAGTAT GCCCATC GCCTG GATGCGC TTTTTGTTGAAGCCG HRM2_20890 2347588 - 2347905 + | hypothetical protein TERM 2672 2348008 - 2348024 + F 100 -5.1 -6.13503 | CGAAAAAGATATCCA GGGGA CTTGAGA TCCCC TTTTTTTTATTAATG TERM 2673 2349180 - 2349153 - g 74 -9.8 -3.53444 | opp_overlap 2349176, overlap 2349172 2349175 2349176 GCAGTGGTTTGTAAA GGCCGGTCCCCT TGCA AAGGAAGCGGCC GATGCCGTTCGTAAC TERM 2674 2350047 - 2350021 - g 73 -5 -4.59773 | opp_overlap 2350023, overlap 2350022 2350023 2350041 CTTGAGGCTGAAAAA CCGGCCCTCTAT GAA AAAGAGGGCCTT GATCGCAGGAACACG TERM 2675 2350045 - 2350023 - g 73 -12 -2.61004 | opp_overlap 2350023, overlap 2350022 2350021 2350041 TGAGGCTGAAAAACC GGCCCTCTAT GAA AAAGAGGGCC TTGATCGCAGGAACA TERM 2676 2350023 - 2350045 + G 77 -12 -3.14132 | opp_overlap 2350023 2350022 2350021 2350041 TGAGGCTGAAAAACC GGCCCTCTAT GAA AAAGAGGGCC TTGATCGCAGGAACA valS 2348059 - 2350719 + | ValS TERM 2677 2350776 - 2350803 + T 100 -9.9 -5.48825 | TTGTTTCTGGAGCAG GCAGGCAGG TCAATTGATC CCTGCCTGC TTTTTTTGAATCGTA HRM2_20910 2351670 - 2350753 - | signal transduction family protein (GGDEF domain protein) lepA 2351819 - 2353624 + | LepA HRM2_20930 2353862 - 2354854 + | TRAP-type transporter, periplasmic solute binding receptor (TAXI family protein) TERM 2678 2354919 - 2354901 - g 73 -12.4 -2.53894 | overlap 2354900 2354911 ACCACCAGGATGAAG CGGGCCAG AAT CTGGCCCA GAAACTTGCCGATGA TERM 2679 2355632 - 2355610 - g 79 -11.2 -3.53012 | opp_overlap 2355602 GGGTGGCCCTGCAAA GGCCGCCATC ATG GGTAGCGGCC TTACGGGTATGGTGT TERM 2680 2355726 - 2355710 - g 80 -4.4 -5.1861 | gap 1 CCCATGATGAAAAAA GTGG-GG TACC CCGCCAC AAAGGCCGCAGCCGT HRM2_20940 2354867 - 2356963 + | TRAP-type transporter, 4TM/12TM fusion protein (permease) uspA1 2356960 - 2357454 + | UspA1 TERM 2681 2357488 - 2357460 - T 79 -11 -3.08133 | opp_overlap 2357460 2357463, overlap 2357463 CATGGATTGAGTCAA CAACCCCTGAGC TAAAG ACTCGGGGGTTG TTTCGCCGGTAAACT TERM 2682 2357460 - 2357488 + T 100 -12.5 -3.55563 | opp_overlap 2357460 2357463, overlap 2357463 CATGGATTGAGTCAA CAACCCCTGAG CTAAAGA CTCGGGGGTTG TTTCGCCGGTAAACT TERM 2683 2357463 - 2357485 + T 77 -8.4 -3.91716 | opp_overlap 2357463 2357460, overlap 2357460 GGATTGAGTCAACAA CCCCTGAG CTAAAGA CTCGGGGG TTGTTTCGCCGGTAA leuA2 2359046 - 2357502 - | LeuA2 TERM 2684 2358096 - 2358120 + g 82 -7.9 -4.62471 | CCCAACGGTTTCAGG CTTCATGATCT CGT AGGTCATGGGG TTTTTGAGCATTCCG TERM 2685 2358828 - 2358839 + g 90 -5.8 -5.2696 | overlap 2358825 GGCCCGGCAGAGGCC TGCC ACCT GGCA TTTTTTGAGTTTTCG TERM 2686 2359085 - 2359097 + r 82 -3.3 -5.54338 | GAAACTTTTGTCAGA CGCTA TTA TTGCG TTTTTATTTTGGTTG leuA3 2360726 - 2359134 - | LeuA3 TERM 2687 2359474 - 2359488 + g 85 -3.5 -5.47218 | GTGGCATGGGCATAG CAGGG TTGGT CTCTG TTTTTTTCAATGGAA TERM 2688 2359539 - 2359550 + g 70 -4.4 -4.68994 | AAAGTGTGACTCATA CTGT TCAG ACAG TTTTTCCATGATGAT TERM 2689 2360776 - 2360743 - R 71 -9.6 -3.05384 | opp_overlap 2360744 2360745, overlap 2360760 TTTTTCTCCAGTTAA TCGGGATCAGGCAA TAAGGC TCGCCTGATCCCAT TCTATATCCCGATCA TERM 2690 2360744 - 2360775 + r 75 -8.7 -3.59202 | opp_overlap 2360743 2360760, overlap 2360745 TTTTCTCCAGTTAAT CGGGATCAGGCAA TAAGGC TCGCCTGATCCCA TTCTATATCCCGATC TERM 2691 2360745 - 2360774 + r 83 -12.2 -2.752 | opp_overlap 2360743 2360760, overlap 2360744 TTTCTCCAGTTAATC GGGATCAGGCAA TAAGGC TCGCCTGATCCC ATTCTATATCCCGAT TERM 2692 2360871 - 2360904 + r 71 -6.7 -4.12188 | gap 1, overlap 2360872 TCTTTTAGTTCCTCT TCCAGTC-GCTCCTGG TAG TCAGGGGCAGAGTGGG TTTTGAGGGTGATAG ilvH 2361429 - 2360929 - | IlvH ilvG 2363147 - 2361453 - | IlvG TERM 2693 2362892 - 2362905 + g 72 -8.1 -3.85817 | opp_overlap 2362892 TGTAGGCTGATGCAA TGCCG GTGA CGGCA TTTGTAGCACCGGGT ilvD2 2364840 - 2363170 - | IlvD2 TERM 2694 2363222 - 2363237 + g 85 -3.9 -5.49568 | overlap 2363209 ACCTGTCTTGCATAC CGGGC CAGATA GCCTG TTTTTATTTTGGGTT TERM 2695 2363629 - 2363619 - G 70 -3.2 -4.8622 | CTTCTGAATGAAAAA CCCT TGC AGGA CCCTGGTGCTGGAGC TERM 2696 2364866 - 2364894 + r 100 -18.3 -4.28977 | opp_overlap 2364866 CGTTAAATGAAAAAA GCCGTTATCAGCT CTG GGCTGATAACGGC TTTTAAATATCTTAT TERM 2697 2364894 - 2364866 - R 100 -17.6 -5.37593 | opp_overlap 2364866 CGTTAAATGAAAAAA GCCGTTATCAGC TCTGG GCTGATAACGGC TTTTAAATATCTTAT purE 2365875 - 2365111 - | PurE HRM2_21020 2367019 - 2365877 - | hypothetical protein TERM 2698 2366483 - 2366505 + g 77 -12 -3.09272 | opp_overlap 2366473, overlap 2366471 2366479 AACCACCCCGATCTT CTGACCGGAG AGT TTCCGGTCGG TGATTTTACCCCTGT TERM 2699 2367305 - 2367318 + G 73 -5.3 -4.72986 | ACAGGTCTTTTAACG GAATG GTTT CATTC TTTTTCCTGCAAATG TERM 2700 2367390 - 2367412 + G 100 -13.5 -4.39287 | opp_overlap 2367390 GGAACCGTTGAAAAA GGAGCGGTT CAAAA AACCGCTCC TTTTGATATGATTAC TERM 2701 2367412 - 2367390 - g 100 -14.2 -4.59853 | opp_overlap 2367390 GGAACCGTTGAAAAA GGAGCGGTTC AAA AAACCGCTCC TTTTGATATGATTAC HRM2_21030 2367139 - 2367423 + | hypothetical protein HRM2_21040 2368059 - 2367424 - | hypothetical protein HRM2_21050 2369239 - 2368229 - | transcriptional regulator (Fis family protein) modF 2370936 - 2369527 - | ModF TERM 2702 2370990 - 2371040 + r 93 -11.2 -4.13728 | gap 2, opp_overlap 2370984 2370983, overlap 2370993 AAAAAATACCTGCCG GGGGCC--GAATCGCCGTCGGCCA AAGGA TGGCAGGCGGCGATTCAAGGCGTC TTTTGCGAATCTATA TERM 2703 2370993 - 2371037 + r 93 -13.7 -2.79272 | gap 2, opp_overlap 2370984 2370983, overlap 2370990 AAATACCTGCCGGGG GCC--GAATCGCCGTCGGCCA AAGGA TGGCAGGCGGCGATTCAAGGC GTCTTTTGCGAATCT ilvC 2372672 - 2371200 - | IlvC TERM 2704 2372980 - 2372990 + G 80 -4.6 -5.06414 | CCTGGAGGCTGAGGT GGGG CAA TCCC TTTTTGTTCGGGACA ilvY 2372852 - 2373733 + | IlvY TERM 2705 2373773 - 2373783 + T 70 -5.4 -4.54449 | opp_overlap 2373773, overlap 2373763 GGCAGTGACAAACAG GTCA TTA TGAC TTTTCTATACGATAT fadD5 2375662 - 2373788 - | FadD5 TERM 2706 2375907 - 2375919 + H 77 -4.8 -4.91511 | TCTATCTCAAAACGC CCAC CAATT GTGG TTTTTGTCATCAGAT HRM2_21100 2376233 - 2377306 + | putative protease TERM 2707 2377520 - 2377509 - g 71 -7.2 -4.02733 | opp_overlap 2377514 GAAAAGACAGAATAA CGGC ACAT GCCG TGAAGCATGTATTAG TERM 2708 2377789 - 2377805 + G 70 -2.3 -5.00884 | opp_overlap 2377792, overlap 2377790 GGCCTTTCCCTTAAG GGATAAA CCT TTTATCG TTTTTTCCACAGGGT HRM2_21110 2377466 - 2378107 + | NADPH-dependent FMN reductase HRM2_21120 2379458 - 2378199 - | hypothetical protein TERM 2709 2378394 - 2378380 - G 74 -2.1 -5.13722 | gap 1, overlap 2378381 CTGAGGAAAAGAAAA CCCAGT TGGG AC-GGG TCCATCTTGAGGGGT TERM 2710 2379288 - 2379269 - G 71 -6.4 -4.37886 | overlap 2379270 GGAGGGCCGAGAAAA CCTGGG TGATGATG CCCAGG GCACCGAGCACCAGT TERM 2711 2379360 - 2379347 - G 71 -5.9 -4.34402 | TCGGCCACATTAAAA CCGGC ACAA GCCAG GCCAGTAATGCCGGT TERM 2712 2379815 - 2379770 - H 73 -2.8 -5.16151 | opp_overlap 2379777, overlap 2379777 TAAATGTAATAAAAA TGGAAAACTGCTATTTTTAA CTTAAT TTAAAAATAGCAGTTCATAA ATATAATATGCTTAT TERM 2713 2379808 - 2379777 - H 100 -11.9 -4.52505 | opp_overlap 2379777, overlap 2379770 AATAAAAATGGAAAA CTGCTATTTTTAA CTTAAT TTAAAAATAGCAG TTCATAAATATAATA TERM 2714 2379777 - 2379808 + H 86 -11.9 -3.20858 | opp_overlap 2379777 2379770 AATAAAAATGGAAAA CTGCTATTTTTAA CTTAAT TTAAAAATAGCAG TTCATAAATATAATA HRM2_21130 2379970 - 2380215 + | hypothetical protein HRM2_21140 2380234 - 2380620 + | hypothetical protein TERM 2715 2380747 - 2380792 + F 93 -12.7 -3.06831 | TAAGCCGTCCTCTTC GTTGCCTTAATGGGCGCATAT TTCA ATATGCTCCCATTAACGCGCC TTGAATACGACTTAA HRM2_21150 2380897 - 2381520 + | hypothetical protein HRM2_21160 2382269 - 2381583 - | hypothetical protein HRM2_21170 2383152 - 2382343 - | hypothetical protein TERM 2716 2382819 - 2382829 + g 70 -8.2 -3.79419 | overlap 2382817 ACTCCTTATCCATCA CCGG GGC CCGG TATTTTCTGGCCACC HRM2_21180 2384418 - 2383168 - | hypothetical protein HRM2_21190 2386412 - 2384418 - | hypothetical protein TERM 2717 2384983 - 2385006 + g 86 -3 -5.60689 | overlap 2384997 2385000 AGTGTGAAATGATTT CCCTGTCGCT GGAC AGAGACGAGG TTTTTTCTTGTCTCC TERM 2718 2385461 - 2385491 + g 71 -6.1 -4.386 | gap 1, overlap 2385463 GTATCTGGATGACCA CTTCCCGACC-CCA CATC TGCAGGTCGGGATG TTTTCTCAACCGTTC TERM 2719 2386228 - 2386240 + g 91 -2.7 -5.72207 | TCAACGGATTGACCT TCAGT AAC ATTGA TTTTTTTGATTTCAA HRM2_21200 2388101 - 2386470 - | putative spore coat assembly protein TERM 2720 2388091 - 2388104 + g 74 -3.9 -4.91511 | GAGCCTATTGTTCGT TTCAT CTGC ATGAA TTTTTCTCCTCAAAT TERM 2721 2388847 - 2388827 - g 80 -4.7 -5.10208 | gap 1 GAACTGGAACAAAAA TCCCACGG TGCTGT CCG-GGGA AATCGGAGATCCCAC HRM2_21210 2388420 - 2390912 + | fibronectin type III domain protein TERM 2722 2390943 - 2390974 + F 100 -18.8 -5.47159 | opp_overlap 2390943 GGGTTTATCATAAAA TCAGCGACCGGCTG CATC CAGGCGGTCGCTGA TTTTTTCTATTCGAA TERM 2723 2390974 - 2390943 - f 100 -18.8 -4.46212 | opp_overlap 2390943 GGGTTTATCATAAAA TCAGCGACCGGCTG CATC CAGGCGGTCGCTGA TTTTTTCTATTCGAA TERM 2724 2392010 - 2391999 - g 84 -4.4 -5.24129 | opp_overlap 2392005 CTGGTCCATAAAAAA GATC TCGG GATC CATACCCCCTTTTTC HRM2_21220 2391297 - 2393144 + | putative 4-hydroxybutyrate coenzyme A transferase TERM 2725 2394254 - 2394239 - g 83 -3.2 -5.47821 | opp_overlap 2394246 ATCCATTGAAAAAAA GGTTTC TGCG GATACC GGTTGAATTTGGTGT TERM 2726 2394360 - 2394325 - g 74 -4.7 -4.77795 | opp_overlap 2394356, overlap 2394326 CAAAAAAAATACAAA CCCCATACCGGCA TTGATTATGG TGCCAGGATGGGA ACCCCTATTTTTGCC TERM 2727 2394749 - 2394711 - g 95 -6.1 -5.52384 | gap 2, overlap 2394720 GGTGGAGGAAAAAAA TCACCA-G-AACAGCAGTG GAA CTCTGCTGGTGCGTGGTGA CTCACCTGAGTAAAA TERM 2728 2394738 - 2394720 - g 70 -8.8 -3.54622 | overlap 2394711 AAAAAATCACCAGAA CAGCAGTG GAA CTCTGCTG GTGCGTGGTGACTCA HRM2_21230 2393575 - 2394762 + | peptidase M23/M37 family protein TERM 2729 2395590 - 2395578 - g 71 -7.7 -4.07687 | opp_overlap 2395585 ACGGTTTCTTGAAAA GCTCT TCC AGAGC AGTCTGATTTCCAGG HRM2_21240 2394793 - 2395755 + | phosphotransferase family protein HRM2_21250 2396550 - 2395918 - | hypothetical protein HRM2_21260 2396801 - 2397160 + | hypothetical protein TERM 2730 2397787 - 2397777 - g 79 -5.4 -5.00616 | TTTTCCCTCAAAAAA GAGT CTA ACTC CATGGTCTGGATGAC HRM2_21270 2397393 - 2398019 + | hypothetical protein TERM 2731 2398150 - 2398160 + F 85 -4 -5.54192 | TGAGTTTATTTATTC TTGA CCA TCAA TTTTTTTAGGTTCAT TERM 2732 2398396 - 2398412 + F 71 -9.3 -2.92878 | overlap 2398388 2398396 AAACTTTGGGAGTCT CCCCGGC AAT GCCTGGG GTTTACCTTTGATTA TERM 2733 2398396 - 2398413 + F 78 -9.1 -3.89336 | gap 1, overlap 2398396 2398388 AAACTTTGGGAGTCT CCCC-GGC AAT GCCTGGGG TTTACCTTTGATTAA TERM 2734 2398511 - 2398525 + G 72 -10 -3.40403 | overlap 2398506 ATTTACCCTTGGACT GATGGC AGT GCCATC TTCTGCTGAAGAAAA TERM 2735 2398589 - 2398610 + G 73 -11.5 -2.87931 | CGGGTCCTGTGCCCT GGCCGGGCA GCGG TGCCAGGCC TCTGTGGACACTGCA livJ3 2398449 - 2399717 + | LivJ3 TERM 2736 2400646 - 2400656 + G 93 -8.2 -5.1101 | TGGTTGTTATGATCC GCCC CAA GGGC TTTTTTGGATGGTGA livH3 2399811 - 2400671 + | LivH3 TERM 2737 2401352 - 2401366 + G 86 -5.6 -5.26316 | TCGGCTTTTCTGGCA GGCCTT TGC GGGGCC TTTTTTGTCCAGTAC livM3 2400677 - 2401681 + | LivM3 livG3 2401683 - 2402444 + | LivG3 TERM 2738 2402773 - 2402787 + G 84 -11.4 -3.89435 | opp_overlap 2402770 GGAGAGATCAATGCC CGCCTG GAT CAGGCG TTTGAATTGTTTCCC TERM 2739 2403025 - 2403048 + G 73 -11.6 -2.94218 | opp_overlap 2403025 CAGATGGTTCAAGAA GCCCTGGAGG TCGC CCACCGGGGC TATGTGATCCAGACT TERM 2740 2403048 - 2403025 - g 70 -9.4 -3.63073 | opp_overlap 2403025 CAGATGGTTCAAGAA GCCCTGGAGG TCGC CCACCGGGGC TATGTGATCCAGACT livF3 2402425 - 2403141 + | LivF3 mip1 2403779 - 2403165 - | Mip1 mvaB 2405073 - 2404129 - | MvaB TERM 2741 2404781 - 2404794 + g 71 -6.7 -4.14633 | AAGGTTTCGCTGGCC GCTGT GAAT ACAGC TATTTTTTCGACGTC HRM2_21350 2406773 - 2405517 - | transposase for insertion sequences IS116, IS110 and IS902 (IS111A/IS1328/IS1533 family protein) TERM 2742 2405736 - 2405753 + g 86 -2.7 -5.5604 | gap 1 CAGTTTGTAATATTT GGC-CTTG TAA TAAGAGCC TTTTTTCTTGATTGC TERM 2743 2406130 - 2406142 + g 100 -5.5 -5.7946 | overlap 2406131 CCATTAAGGCTTTTA TGCAG TTC CTGCG TTTTTTTCTTAAGGC TERM 2744 2406933 - 2406970 + r 71 -9.7 -2.68823 | overlap 2406959 AGGTGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCGTGCCG GTTATATGAAACACC TERM 2745 2406959 - 2406971 + r 80 -10.5 -3.48276 | overlap 2406933 GAGCCATACCTCGCT CCGGC CGT GCCGG TTATATGAAACACCC TERM 2746 2407048 - 2407060 + r 100 -10.5 -4.53303 | GAGCCATACCTTACT CCGGC CGT GCCGG TTTTATATGAAACTC HRM2_21360 2408055 - 2407660 - | hypothetical protein HRM2_21370 2408734 - 2408069 - | HTH-type transcriptional regulator TERM 2747 2408174 - 2408152 - G 100 -9.8 -5.1356 | opp_overlap 2408160 2408161, overlap 2408153 GGGCAGGAAGAAAAA TGCCCACCAG GGT CTGGTGGACC CATTGATAATAGGTG TERM 2748 2408173 - 2408153 - G 90 -13.3 -3.67413 | opp_overlap 2408160 2408161, overlap 2408152 GGCAGGAAGAAAAAT GCCCACCAG GGT CTGGTGGAC CCATTGATAATAGGT TERM 2749 2408798 - 2408817 + G 70 -8 -3.75153 | TTATGTGTTCAACTT TTTTGTAC GATC GTACAAAA TTTCAGTTGACACAG TERM 2750 2409632 - 2409608 - g 73 -5.2 -4.72188 | gap 1 CCAATTCAAAAGAAA TTGTCA-ACAT GTGC ATGTGTGACAA TGAATCCTGCCAGTT TERM 2751 2409829 - 2409806 - g 78 -6 -4.77165 | gap 1, overlap 2409807 CGGCCCAGAAGAAAA CCTTTGTCCAC CAG GTGGAC-AGGG ACCGTTGCATTGGAT HRM2_21380 2408785 - 2409993 + | 4Fe-4S ferredoxin, iron-sulfur binding protein TERM 2752 2410275 - 2410254 - g 90 -10.1 -4.44974 | overlap 2410256 TGAAACCCCAGAAAA GGCAGCCAG TATC CTGGCTGAC ATGTCAGACCGCGGT TERM 2753 2410273 - 2410256 - g 70 -11.3 -2.55034 | overlap 2410254 AAACCCCAGAAAAGG CAGCCAG TATC CTGGCTG ACATGTCAGACCGCG HRM2_21390 2410054 - 2411121 + | 4Fe-4S ferredoxin, iron-sulfur binding protein TERM 2754 2412030 - 2412046 + G 70 -9.3 -3.56099 | GCATCCCTGACCCCA GGGCCGG AAA CCCGCCC TTTACCGAAGTTCTC TERM 2755 2412581 - 2412571 - g 73 -5.4 -4.62783 | CACTGACCGGAAAAA GGAT ATG ATCC TGGTAGGTGGATTCA fadD6 2411147 - 2412880 + | FadD6 HRM2_21410 2413515 - 2412949 - | hypothetical protein HRM2_21420 2415181 - 2413532 - | hypothetical protein TERM 2756 2414026 - 2414008 - G 76 -4.6 -5.03314 | opp_overlap 2413984 GCCAGTTGGAAAAAA GTCGAA TGTTTTT TTCGAC AAGGTAGCTGGGGTT TERM 2757 2415239 - 2415255 + r 70 -7.9 -3.68366 | overlap 2415235 GGTTTGTAATTTTAT GGTGCGC CTT GCACACC TTGATTTTGCAATAA HRM2_21430 2419409 - 2415306 - | hypothetical protein TERM 2758 2416800 - 2416829 + g 77 -9.4 -4.07568 | gap 2, opp_overlap 2416800 2416797, overlap 2416800 GCCTTCCACAGACCA CCCC-T-CCGCTGT AATG ACAGCGGCATGGGG TTTTAAGGGAAAGGG TERM 2759 2417597 - 2417627 + g 70 -3.3 -4.83615 | gap 1, overlap 2417610 TTTCCTGTACACTGT CCATTTGTGTGCGC ATGG GCG-ATGCCAATGG TTTTTGTGACGCATA TERM 2760 2418250 - 2418261 + g 72 -3.6 -4.89393 | GGATCAATTTCCAGC CGCC AATT GGTG TTTTTCTGCCCTTTG TERM 2761 2419091 - 2419123 + g 82 -10.5 -3.83409 | overlap 2419092 2419119 TAACTTCTTTTGGCC ACTGGGTGCTGCTGC CCG GCAACGGTACCCAGG TTTCATGGTGTATCA TERM 2762 2419092 - 2419122 + g 83 -14 -2.89563 | overlap 2419091 2419119 AACTTCTTTTGGCCA CTGGGTGCTGCTGC CCG GCAACGGTACCCAG GTTTCATGGTGTATC dnaJ3 2420286 - 2419501 - | DnaJ3 HRM2_21450 2421177 - 2420380 - | hypothetical protein TERM 2763 2421610 - 2421620 + H 71 -6.8 -4.09685 | CCGTTAGATTTTGCC GGGT CTG ACCC TTTTGGCCCATGGAA HRM2_21460 2421665 - 2422024 + | putative repressor TrpR (repressor of Trp operon) TERM 2764 2423093 - 2423110 + G 83 -3.4 -5.47399 | gap 1, opp_overlap 2423073, overlap 2423093 2423094 GACCCTGTGTGCCGG C-TGCCC CCACC GGGCAAG TTTTTTTGCCATTAA iorA2 2422008 - 2423831 + | IorA2 TERM 2765 2423962 - 2423942 - g 78 -6.2 -4.81212 | gap 1 TGGATGAGAACAAAA GGGTGCTCA CCTC TGAG-ACCC ATGGCATGGCCCAGC iorB2 2423821 - 2424381 + | IorB2 TERM 2766 2424972 - 2424958 - g 91 -5.6 -5.46629 | overlap 2424959 AAGAGGTTAAAAAAA GGGACC TCA GGTCCA AGATTAACCTCAAGC TERM 2767 2424971 - 2424959 - g 75 -9.1 -3.86351 | overlap 2424958 AGAGGTTAAAAAAAG GGACC TCA GGTCC AAGATTAACCTCAAG paaK1 2424381 - 2425676 + | PaaK1 TERM 2768 2425672 - 2425661 - f 75 -7.2 -4.27117 | TTTTGATAACAGAAA CGGC AACA GCCG TTAAAGGAGAAAAAA TERM 2769 2425887 - 2425871 - g 71 -6.5 -4.1964 | overlap 2425885 TGGAACAGTGGAAAA CCGTGGT TGA AACACGG ACAGACAATGCTGTC dctP4 2425687 - 2426736 + | DctP4 dctQ4 2426736 - 2427206 + | DctQ4 TERM 2770 2427654 - 2427668 + G 79 -11.4 -3.61398 | CCATTGCCTGCGGAT CCACCC TTG GGGTGG TTATTCCGCCAAGCG TERM 2771 2428411 - 2428421 + G 70 -8.2 -3.67877 | overlap 2428409 CAAGGATGTGTTCAA GGGC GTG GCCC TGTTTCTTCCCGCCT dctM4 2427203 - 2428507 + | DctM4 TERM 2772 2429453 - 2429419 - g 100 -15 -4.67904 | opp_overlap 2429425 CATTAACCGGAAAAA CAGCAAGGCCACGGAC CAG GCCCTTGCCCTTGCTG AACGAGGGACGGTGA iadA 2428736 - 2429923 + | IadA TERM 2773 2430488 - 2430528 + G 71 -6.1 -4.41494 | gap 1 AGGGGGGATGCGCCA GCGGGTGATGAC-GGCCA TGGCCC TGGCCTGTAATCCCCAGC TTTTAATTGCAGATG TERM 2774 2430638 - 2430654 + G 73 -10.9 -3.29461 | GTCGGTGATTTTCAT CACCCAT GAC ATGGGTG TTGTGGCCGAACTTG TERM 2775 2431161 - 2431193 + G 76 -6.1 -4.65263 | opp_overlap 2431163 2431168, overlap 2431163 ATGGCGATTTCCAAC CAGGAGATGCAGGCG TTG CGCCAGGATATCCAG TTTATTTTCCAGGAT TERM 2776 2431456 - 2431482 + G 85 -13.1 -3.79906 | gap 1 CCGACGAGGCGGTGT CGGCCCTGGATG TTTC CATCCAGG-CCG TTGTTCTCAACCTCA TERM 2777 2431544 - 2431514 - g 83 -9.8 -4.16943 | GCTCAGACTCCAAAA GGAGATGAACCTGT CCT ATATGTTCATCTCC CATGACATGGCCGTG dppD1 2429925 - 2431835 + | DppD1 TERM 2778 2432480 - 2432467 - g 74 -2.3 -5.16071 | overlap 2432468 AACGATCAAGAAAAA TCCAG ATTA CTGGC GGGGAGATGTCAAGG TERM 2779 2433253 - 2433242 - g 95 -2.2 -5.9218 | GACATAAGAAAAAAA GCCT ATGC AGAC CTCCAGGATTATGTG dppA2 2431877 - 2433397 + | DppA2 dppB1 2433566 - 2434558 + | DppB1 dppC1 2434568 - 2435416 + | DppC1 HRM2_21580 2435451 - 2436161 + | putative anthranilate synthase component II TERM 2780 2436481 - 2436468 - g 80 -2.3 -5.40072 | opp_overlap 2436480, overlap 2436469 GTTGCTTGAAAAAAA TGGAC TTTT GTCCG GTGACGCCACTGTCT dat 2436229 - 2437092 + | Dat HRM2_21600 2437138 - 2437683 + | putative acyltransferase TERM 2781 2437702 - 2437752 + T 100 -11.9 -4.86731 | opp_overlap 2437704, overlap 2437704 CGAAACTGGGCAATG AATCTCACCACGGGACCCAGG CTTAAATTT CCTGGGTACCATGGTGGGATA TTTTATTTACAGGGG TERM 2782 2437704 - 2437750 + T 100 -14.5 -4.05678 | opp_overlap 2437704, overlap 2437702 AAACTGGGCAATGAA TCTCACCACGGGACCCAGG CTTAAATTT CCTGGGTACCATGGTGGGA TATTTTATTTACAGG TERM 2783 2437750 - 2437704 - T 100 -14.5 -3.35088 | opp_overlap 2437702 2437704 AAACTGGGCAATGAA TCTCACCACGGGACCCAGG CTTAAATTT CCTGGGTACCATGGTGGGA TATTTTATTTACAGG HRM2_21610 2438178 - 2437759 - | putative nitrogen fixation protein NifU (NifU-like protein) HRM2_21620 2438576 - 2438196 - | hypothetical protein HRM2_21630 2440565 - 2438676 - | acetyl-CoA hydrolase/transferase family protein TERM 2784 2440692 - 2440679 - H 70 -5.3 -4.56597 | CTTGTTTTTTAAAAA TTTCC ATGG GGAAA AGGGACGAGGCATAT rfbD 2440706 - 2441581 + | RfbD glgP1 2441645 - 2444077 + | GlgP1 HRM2_21660 2444228 - 2444860 + | HTH-type transcriptional regulator HRM2_21670 2445430 - 2444855 - | hypothetical protein HRM2_21680 2446176 - 2445748 - | hypothetical protein recJ 2448006 - 2446288 - | RecJ TERM 2785 2447208 - 2447196 - G 76 -6.2 -4.62069 | TTGCGACGTCAAAAA GGGC AGATA GCCC GGGTCGTTTCCCCCT HRM2_21700 2448176 - 2448385 + | hypothetical protein TERM 2786 2449553 - 2449532 - g 76 -8 -4.26327 | gap 1, opp_overlap 2449546 2449549, overlap 2449529 GACCCATCAAAAGAA CCAGGC-CC TGGTC GGTGCCTGG GAGCAGGTCCTTGTG miaB 2448375 - 2449757 + | MiaB TERM 2787 2450067 - 2450046 - g 71 -7.1 -4.15841 | GGACGAAACCAGAAA GGGTGGGGC CATT GCCGCTCCC CTCAACTATCGTGGA map 2449762 - 2450643 + | Map TERM 2788 2451143 - 2451161 + G 73 -6 -4.43879 | overlap 2451131 TTGTGGGCAGCATTT TCATGGGT GCT GTCCATGA TTTTGGTTCGCTGAT TERM 2789 2451956 - 2451938 - g 83 -8.8 -4.33274 | GGTATACCACCAAAA CCGGTGAG ACC CTCACGGG AATCGCCGCCTGGTC cstA 2450860 - 2452629 + | CstA TERM 2790 2452673 - 2452696 + G 86 -12.4 -3.91716 | opp_overlap 2452675, overlap 2452676 CCTACTACCTTATGA CAGGTCCGGC CCTG GCCGGGCTTG TTGTTTCCGGGATGG TERM 2791 2452676 - 2452693 + G 84 -10.5 -4.08557 | opp_overlap 2452675, overlap 2452673 ACTACCTTATGACAG GTCCGGC CCTG GCCGGGC TTGTTGTTTCCGGGA TERM 2792 2453021 - 2453031 + G 70 -8.2 -3.73072 | opp_overlap 2453021 ACTATCCTTCCCAAA GGCG TAT CGCC TTTGATCAAAGAATT HRM2_21740 2452630 - 2453061 + | hypothetical protein TERM 2793 2453138 - 2453107 - g 100 -8.2 -5.89947 | gap 1 GAAAGCGAAAAAAAA CCTTGTCT-CAATTT ATA AAATTGCAGACGAGG TGGCAAGGGGCAAGG HRM2_21750 2453063 - 2453365 + | hypothetical protein TERM 2794 2453802 - 2453812 + G 82 -4 -5.31275 | TGCCTCCAACGGCCA TTTC CGT GAAA TTTTTTCTCCTGCCG arsA 2453375 - 2454301 + | ArsA TERM 2795 2454384 - 2454396 + T 100 -10.5 -4.9725 | AGCAGATCCCTCTCT CCGGC CGT GCCGG TTTTTATATGAAACT HRM2_21770 2456298 - 2454622 - | transposase (IS4 family protein) TERM 2796 2456296 - 2456317 + g 76 -3.1 -5.0925 | gap 1, overlap 2456298 2456300 TTCTGGTAATTCTTT C-ATGCATTG CCT CAATGTATTG TTTTTCATTTTGGCA TERM 2797 2456298 - 2456314 + g 76 -5.9 -4.62313 | overlap 2456296 2456300 CTGGTAATTCTTTCA TGCATTG CCT CAATGTA TTGTTTTTCATTTTG fsr 2457720 - 2456554 - | Fsr TERM 2798 2456819 - 2456801 - G 83 -3 -5.44119 | overlap 2456802 2456803 GCCAGGGCAAAAAAA CCGCCG ATGAACG CGCCGG CATAGACAAAGGCCC TERM 2799 2457740 - 2457761 + r 71 -2.1 -5.08824 | overlap 2457742 TGTTCATCTCTTGTT CCTCCGGCC TTGG GGCTGGATC TTTTTTCAATCCCGG TERM 2800 2457742 - 2457759 + r 83 -9.1 -4.17608 | overlap 2457740 TTCATCTCTTGTTCC TCCGGCC TTGG GGCTGGA TCTTTTTTCAATCCC HRM2_21790 2459166 - 2457793 - | hypothetical protein HRM2_21800 2459736 - 2459182 - | hypothetical protein HRM2_21810 2459930 - 2460766 + | hypothetical protein HRM2_21820 2460763 - 2462061 + | putative tRNA nucleotidyl transferase protein HRM2_21830 2463780 - 2462137 - | acyl-CoA synthase/ligase family protein TERM 2801 2462171 - 2462183 + g 74 -4.9 -4.78149 | GCCCACACGGCAAGT TTTTC CCT GAAAA TTTTTGCATTGTGCC TERM 2802 2464711 - 2464721 + G 73 -5.4 -4.62336 | GTGGCCGTTGTTTGT TCTG ATG CAGA TTTTTGGGGTGGGGT TERM 2803 2464757 - 2464776 + G 85 -3.6 -5.52384 | gap 1 CTGGGTGCACTGGGG GCAAC-CTT AGG GAGAGTTGC TTTTTTTGATACAGC HRM2_21840 2464100 - 2465755 + | hypothetical protein TERM 2804 2465774 - 2465763 - g 76 -4.4 -4.96388 | opp_overlap 2465763 AACCATGAAAGAAAA TCAG ATTC CTGA ATTTGCCATCCTGGG TERM 2805 2465867 - 2465841 - g 71 -10.8 -3.08032 | overlap 2465839 2465838 CTTGGCTGAAAACGA CCGGGTCAGGAT CGG ACCCTATCCCGG AGAAACGGTTGTCTG fusA1 2465752 - 2467155 + | FusA1 HRM2_21860 2467969 - 2467214 - | hypothetical protein TERM 2806 2467260 - 2467284 + g 71 -6.4 -4.43477 | gap 1 GTTTTTTTGACCCAT CCACC-GTCAG GGGG CTGTCCGGTGG TTTTAATTCGGTCCG TERM 2807 2468387 - 2468407 + G 71 -5.3 -4.56597 | opp_overlap 2468388, overlap 2468388 GGAAGGGGTCGGCAA ACGCCATGG TTG CCATGGAGG TTTTTGGAAACAGCA TERM 2808 2468406 - 2468388 - g 70 -8.8 -3.53761 | opp_overlap 2468388 2468387 GAAGGGGTCGGCAAA CGCCATGG TTG CCATGGAG GTTTTTGGAAACAGC HRM2_21870 2468020 - 2468670 + | putative transcriptional regulator HRM2_21880 2468730 - 2469098 + | hypothetical protein glpX 2469059 - 2470045 + | GlpX HRM2_21900 2471531 - 2470068 - | hypothetical protein HRM2_21910 2472210 - 2471533 - | putative acetyl-CoA synthetase HRM2_21920 2472492 - 2472833 + | hypothetical protein TERM 2809 2473733 - 2473723 - g 76 -8.2 -4.12942 | overlap 2473714 2473713 CTAAAGGGGCTAAAA GCCC TTG GGGC GACCATAACCATAGA murA 2473330 - 2474583 + | MurA TERM 2810 2474911 - 2474932 + G 86 -6.5 -4.96028 | overlap 2474918 GTGTTACACGAACTG CCCCTGGGA ATCG TTCCAGCGG TTCTTTTTTTTGCAG TERM 2811 2474918 - 2474935 + G 93 -4.1 -5.78622 | overlap 2474911 ACGAACTGCCCCTGG GAATCGT TCCA GCGGTTC TTTTTTTTGCAGTGG TERM 2812 2475734 - 2475754 + G 81 -14.1 -2.66733 | CCACCCAGAGGGCGT TCACCATGG TCG CCATGGTGA TGGTCTGCCTTGCCG TERM 2813 2476117 - 2476129 + G 70 -2.6 -4.98522 | overlap 2476110 CTGGCTCTACCCCTT GGGC TGCTT GCTC TTTTTGTCTACCCTT TERM 2814 2476977 - 2477006 + G 100 -8.7 -5.30155 | gap 1 CGTTCTTGTATCTCC CCACCA-TGGAAGT TCA AGTTCCAGTGGTGG TTTTTTCCTTGATCA comE 2474782 - 2477238 + | ComE TERM 2815 2477343 - 2477355 + F 82 -10.5 -3.63515 | opp_overlap 2477339 GGCAGAGACCATGAT CCGGC CAT GCCGG TTATTCAAAATAAGG HRM2_21950 2477349 - 2478131 + | activator of 2-hydroxyglutaryl-CoA dehydratase (duplicated HSP70 domain) HRM2_21960 2482315 - 2478101 - | hypothetical protein TERM 2816 2478625 - 2478659 + g 83 -13.8 -3.29144 | overlap 2478628 CTCCGCCGTTTGCCT CAATGTAATGGACAAG ATC CTGGTTCATTACATTG TTGTCCCGGACGTAG TERM 2817 2478628 - 2478656 + g 77 -9.7 -3.78934 | overlap 2478625 CGCCGTTTGCCTCAA TGTAATGGACAAG ATC CTGGTTCATTACA TTGTTGTCCCGGACG TERM 2818 2478703 - 2478688 - G 74 -4.6 -4.85267 | opp_overlap 2478688 2478690, overlap 2478690 AGAAATCACCAAAAA CGGCAA CCTT TGGCCG TTGCTCTTTTTTTAC TERM 2819 2479262 - 2479280 + g 100 -4.4 -5.75945 | opp_overlap 2479260 GCCGGTGATGGAATC CCAGTTGG GAA CCACCAGG TTTTTTTTGCCGGGT TERM 2820 2479455 - 2479470 + g 79 -7.6 -4.44448 | ACAAGGTAGGGCTTG TCATGG GCCT CCATGA TTTGTTTGAAATAAT TERM 2821 2479854 - 2479837 - G 74 -11.3 -3.05384 | TTTTTTTCCATTCAA CGGCCTT GTCA AAGGCCG AGGAGATGTCAAAAA TERM 2822 2480964 - 2480940 - G 87 -9.9 -4.36914 | opp_overlap 2480938 2480940, overlap 2480942 TGCTCCTCGATAAAA CTGCCCGTGCC AGC GGCACAGACCG TGTTCATGAACGAGG TERM 2823 2480962 - 2480942 - G 70 -11.1 -2.52946 | opp_overlap 2480940 2480938, overlap 2480940 CTCCTCGATAAAACT GCCCGTGCC AGC GGCACAGAC CGTGTTCATGAACGA HRM2_21970 2482768 - 2482316 - | hypothetical protein TERM 2824 2482894 - 2482907 + H 71 -2.3 -5.18371 | opp_overlap 2482894 GTGTCAATGGAAAAT GCGGA TAAA TACGC TTTTGTTTTGTGGGG HRM2_21980 2483035 - 2483844 + | ABC-type transporter involved in resistance to organic solvents, permease protein HRM2_21990 2483852 - 2484604 + | ABC-type transporter involved in resistance to organic solvents, ATP-binding protein HRM2_22000 2484633 - 2485082 + | ABC-type transporter involved in resistance to organic solvents, periplasmic binding component TERM 2825 2485274 - 2485256 - g 71 -11 -2.72344 | overlap 2485267 CCTGATCCTGAATGA GCCGGTTG AAA CAACCGAC GCAGGGTTGGTCCAC HRM2_22010 2485116 - 2485739 + | ABC-type transporter involved in resistance to organic solvents, toluene tolerance protein vacJ 2485736 - 2486458 + | VacJ HRM2_22030 2487278 - 2486478 - | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein TERM 2826 2486902 - 2486913 + g 95 -5.8 -5.40072 | GTGATGGTTGTGCCC GGTG TAAA CACC TTTTTTTCCGGCGGC nirD 2487730 - 2487275 - | NirD TERM 2827 2487778 - 2487755 - R 100 -16.8 -5.15969 | opp_overlap 2487755 CCTTAACTCAAAAAA GGCCCTGCAT AAAA ATGCAGGGCC TTTTAGCGGTCATGA TERM 2828 2487755 - 2487778 + r 100 -16.8 -4.12188 | opp_overlap 2487755 CCTTAACTCAAAAAA GGCCCTGCAT AAAA ATGCAGGGCC TTTTAGCGGTCATGA dsrC 2488140 - 2487823 - | DsrC dsrB1 2489121 - 2488276 - | DsrB1 TERM 2829 2489110 - 2489120 + g 73 -5.4 -4.74801 | GGGATAAGGCCGATA TGGA TTA TCCA TTTTTCCTCCAATTG dsrA1 2490195 - 2489140 - | DsrA1 TERM 2830 2489563 - 2489581 + g 80 -4.4 -5.1615 | opp_overlap 2489552 2489550, overlap 2489566 CACAGCCAGAGGCCC CATGGCAG TTT CAGCCTTG TTTTTTAACTGTTCA TERM 2831 2489566 - 2489578 + g 70 -4.7 -4.65666 | opp_overlap 2489552 2489550, overlap 2489563 AGCCAGAGGCCCCAT GGCAG TTT CAGCC TTGTTTTTTAACTGT TERM 2832 2490265 - 2490277 + r 80 -10.5 -3.40867 | opp_overlap 2490256 TAAAAATACCATGTT CCGGC CGG GCCGG TTACTTGATAAATGC fdhB5 2491225 - 2490278 - | FdhB5 mvhD5 2491659 - 2491237 - | MvhD5 TERM 2833 2491633 - 2491645 + g 85 -4.1 -5.49729 | GTTGCACAAAAAACC GACGA TCT TTGTC TTTTTTTCCGTCATT hdrL1 2496122 - 2491674 - | HdrL1 TERM 2834 2493350 - 2493338 - G 77 -10.5 -3.615 | overlap 2493336 ACTTGCAGACAAACA CCCCG ATG CGGGG CCGTTCACCAATGAC TERM 2835 2494353 - 2494368 + g 70 -3.2 -4.79223 | GGGGATTCTTGCCAT GGTCTG GCGT TGGACC TTTTTGATCCTGTCC TERM 2836 2495566 - 2495582 + g 83 -2.9 -5.4833 | overlap 2495568 TTTCGTAGGATTACC TCCAGGG CCT CCTTGTA TTTTTTCTTGCCTGC TERM 2837 2495951 - 2496009 + g 77 -10.5 -3.60048 | gap 2, opp_overlap 2495993, overlap 2495948 2495997 AAATAATTCACATGG CACAGTCATTGGTGGGG-AATGTCTT-GT CTA ACTGGGACATTACCCCGCCAATGGATGGG CTTTTTTCAACCAAA TERM 2838 2495997 - 2496010 + g 70 -2.3 -5.00884 | opp_overlap 2495993, overlap 2495951 CTGGGACATTACCCC GCCAA TGGA TGGGC TTTTTTCAACCAAAT miaA 2496355 - 2497275 + | MiaA TERM 2839 2497533 - 2497513 - g 100 -9.7 -5.00616 | opp_overlap 2497517 TTGTGTCGGAAAAAA CAGAGGCTG AAA CAGCCTTTG AACTTGCCCAGGGTC TERM 2840 2497517 - 2497529 + G 73 -9.1 -3.66178 | opp_overlap 2497513 GTCGGAAAAAACAGA GGCTG AAA CAGCC TTTGAACTTGCCCAG TERM 2841 2497628 - 2497652 + G 71 -7.1 -4.15788 | opp_overlap 2497626 2497628 TGAACATGAAAAGGA TCGGGTGAGGT CGA GTCTCAACCGA TTTCTTGCCACGGTT TERM 2842 2497839 - 2497857 + G 80 -9.6 -4.07885 | opp_overlap 2497838 2497839, overlap 2497850 CAGGATGGTGAAAAT GCAAGGCA GCT TGTCTTGC TTTTGCAGGAACATC TERM 2843 2498126 - 2498142 + G 70 -10.1 -3.32647 | opp_overlap 2498125 2498126 GGTGGCCGGCCAAAC GGCCCAG CAT CTGGGTC TTCCTCTGATTGCCA TERM 2844 2498614 - 2498626 + G 88 -4.1 -5.55664 | opp_overlap 2498611, overlap 2498615 ATGCCGTAAATACCG TCATC ACA GATGG TTTTTTTGCTAATGG TERM 2845 2498872 - 2498815 - g 70 -10.5 -2.92094 | overlap 2498814 TGTCAGACAAAAGAG TCTTTGAGGGCGTTACAGGCCGAACCA TGTT TGATCCGGACGGCAACGCCCAGAAGGA GCTTGTCTTTATTAC pfkA1 2497323 - 2498924 + | PfkA1 HRM2_22130 2500278 - 2498890 - | ABC-type branched-chain amino acid transporter, periplasmic substrate-binding protein TERM 2846 2499066 - 2499091 + g 70 -11.1 -2.52464 | opp_overlap 2499057 CCAGAAGCTTGGTCT TGCCGGCCATG CCCG CATGGACGGCG TCCCTTCCAAGGAAC kdsD 2501268 - 2500291 - | KdsD TERM 2847 2500740 - 2500750 + g 88 -4 -5.65496 | ACCGTTTAAAGTCGC TTTC CTT GAAA TTTTTCTTTTTAATG HRM2_22150 2501549 - 2501821 + | hypothetical protein TERM 2848 2501874 - 2501829 - f 100 -9.7 -4.66537 | opp_overlap 2501830, overlap 2501830 GGCGTTAAGATAAAA TTTTCCTTGAACCCGGCCTCA CCAT TAATGCCGGGTTCAAGGGCAT TCTCCTTCCCATGTC TERM 2849 2501873 - 2501830 - f 100 -13.2 -3.3944 | opp_overlap 2501830, overlap 2501829 GCGTTAAGATAAAAT TTTCCTTGAACCCGGCCTCA CCAT TAATGCCGGGTTCAAGGGCA TTCTCCTTCCCATGT TERM 2850 2501830 - 2501873 + F 100 -13.2 -3.52093 | opp_overlap 2501830 2501829 GCGTTAAGATAAAAT TTTCCTTGAACCCGGCCTCA CCAT TAATGCCGGGTTCAAGGGCA TTCTCCTTCCCATGT aspC3 2501912 - 2503237 + | AspC3 TERM 2851 2503303 - 2503315 + G 76 -6.9 -4.4836 | CCGGACATTGCCGTT GCCGG ACG CTGGC TTTTCAATTTTATTC eriC2 2503246 - 2505042 + | EriC2 TERM 2852 2505051 - 2505062 + T 70 -5.8 -4.25104 | opp_overlap 2505051 CCATTGAGGCAGGAA CAGG TATC CCTG TTTTAATAAAAAACC TERM 2853 2505086 - 2505076 - T 82 -3.2 -5.4505 | TGTTTTAATAAAAAA CCTC CAC GAGA AAAAGCCCCTTTGCC truA1 2505805 - 2505065 - | TruA1 TERM 2854 2505106 - 2505091 - G 87 -7.5 -4.91109 | opp_overlap 2505100 2505102 CCTCCACGAGAAAAA GCCCC TTTGCC GGGGC TGTCGCCCCTGCACG TERM 2855 2506561 - 2506524 - g 76 -3.2 -5.1287 | overlap 2506526 2506547 TTTACAGGGAAAAAA GGGGTTAAGGATGCCG AACAAA CGGCCGCCCTTACCGC CCATGCCCTTCACAT argJ 2506299 - 2507468 + | ArgJ TERM 2856 2507957 - 2507943 - g 73 -9.2 -3.67611 | TTGACGGTAAGATAA CCCGGA AGG CCCGGG TGAGGCGGCTGTCAG rluB 2507465 - 2508157 + | RluB TERM 2857 2508535 - 2508548 + G 86 -6.7 -4.96848 | CTACGGACACCGCTC GTCAG GTGG CTGAC TTTTTATATGGCAGG TERM 2858 2510250 - 2510239 - g 78 -5.8 -4.88293 | AACTGGAAAAAGAAA TCCG GGAG CGGA AACGGGCGGAAAAAG TERM 2859 2511012 - 2511002 - g 71 -5.4 -4.55887 | opp_overlap 2511002 TGTCAAAAACATAAA CGAT CAA ATCG TTGTCTCCATCACGG HRM2_22210 2508270 - 2511233 + | two-component sensory histidine kinase (drug sensor/ATP binding) HRM2_22220 2511233 - 2511691 + | two-component response regulator HRM2_22230 2511684 - 2512709 + | signal transduction family protein (GGDEF domain protein) HRM2_22240 2512710 - 2513441 + | SGNH hydrolase family protein TERM 2860 2514505 - 2514455 - g 100 -18.4 -2.82353 | opp_overlap 2514458 2514460, overlap 2514460 ATATGAACACAGAAG CAAAAGCGGCCTGGGACCGGTT AAGATAA ACCCGGTCACAGGCCGCTCTTA TTAAAGACGGTCAGA TERM 2861 2514458 - 2514502 + G 100 -15.7 -3.61715 | opp_overlap 2514455 2514460, overlap 2514460 TGAACACAGAAGCAA AAGCGGCCTGGGACCGGTT AAGATAA ACCCGGTCACAGGCCGCTC TTATTAAAGACGGTC HRM2_22250 2513554 - 2514483 + | peptidase (M48 family protein) TERM 2862 2514500 - 2514460 - T 100 -18.3 -4.55544 | opp_overlap 2514458 2514460, overlap 2514455 AACACAGAAGCAAAA GCGGCCTGGGACCGGTT AAGATAA ACCCGGTCACAGGCCGC TCTTATTAAAGACGG TERM 2863 2514460 - 2514500 + T 100 -18.3 -3.38812 | opp_overlap 2514460 2514455, overlap 2514458 AACACAGAAGCAAAA GCGGCCTGGGACCGGTT AAGATAA ACCCGGTCACAGGCCGC TCTTATTAAAGACGG hasA 2515927 - 2514530 - | HasA TERM 2864 2514700 - 2514690 - G 70 -2.4 -5.01553 | AACCCATAAACAAAA GACC AGA GGGC GGCCAAACGACCAAA TERM 2865 2514848 - 2514832 - G 78 -2.1 -5.22006 | TGATCACAAGAAAAA GCTGGGC TTT GGTCAGC GCCATCCAGCCTGAC TERM 2866 2515488 - 2515504 + g 70 -4.3 -4.69027 | overlap 2515489 GTGACAATCCTATCT CCCAGGG TTC TCCTGGC TTTTTGAATCCATTT TERM 2867 2515639 - 2515615 - G 82 -7.1 -4.8543 | overlap 2515616 2515617 CAAGGGTTACAAAAA CCTGCCTGC CTTCGTT GTAGGCAGG AACAATTACCGTACA HRM2_22270 2516506 - 2517852 + | two-component sensory histidine kinase HRM2_22280 2517865 - 2518557 + | hypothetical protein HRM2_22290 2518554 - 2519906 + | sigma-54 dependent DNA-binding response regulator (NtrC-type regulator) TERM 2868 2520029 - 2519993 - T 84 -10.9 -3.68222 | opp_overlap 2519998, overlap 2519998 TTCTAAGCCGAACAA TGAAACGTCCACAGGTG ATG CATTGGTGGACGTTTCA TCTGAAAAAAAATCA TERM 2869 2519998 - 2520024 + T 81 -9.4 -3.83026 | opp_overlap 2519998 2519993 AGCCGAACAATGAAA CGTCCACAGGTG ATG CATTGGTGGACG TTTCATCTGAAAAAA trpS 2521075 - 2520065 - | TrpS TERM 2870 2520128 - 2520142 + g 79 -5.6 -5.03314 | GGTTGCATACTCCCT GGCCCT GAG AGCGCC TTTTTTCAGAATGGC HRM2_22310 2523807 - 2521135 - | polyA polymerase family protein (tRNA nucleotidyltransferase) (tRNA CCA-pyrophosphorylase) TERM 2871 2522348 - 2522366 + g 70 -4.5 -4.72272 | AGGTTTATTCCGAGT TTGTCGC CGGCT GCGCCAA TTTTTCGTAAAAGGG HRM2_22320 2524597 - 2523980 - | acyltransferase family protein TERM 2872 2525110 - 2525122 + G 76 -4.9 -5.00616 | ACCCAAGGATTTGTT TGAAA ATA TTTCA TTTTTTCAGCCCAAG TERM 2873 2525720 - 2525692 - g 89 -10.3 -4.37886 | CTATGCCTCAGAAAA GGGCCATATTATC ATG GATGATCTGGCCC TAAAGCTGCCTGTGT pilC 2524961 - 2526169 + | PilC TERM 2874 2526537 - 2526577 + G 70 -10.4 -2.93252 | overlap 2526534 GTGGGCATCATTGGT GCGAGCATGTTGCTTCCC AGGGG GGGAAGCATGGTGATCGC TGCTTGTTCCAGCGT HRM2_22340 2526180 - 2527493 + | putative pilS, sensory histidne kinase TERM 2875 2528217 - 2528245 + G 73 -11.7 -2.69151 | opp_overlap 2528225, overlap 2528215 TCAAGTATTGCACCG TGATGACAGCCTC CAT GGGGCTGTCGGCA TCCTGTGTGGGACAG hynB 2528084 - 2529076 + | HynB TERM 2876 2530252 - 2530271 + G 73 -2.8 -5.03145 | AACCCTTAAAAAACT GGGTGT GGGTTCAG ACGCCC TTTTTTCAACCCTTG TERM 2877 2530464 - 2530441 - g 73 -11.8 -2.70932 | gap 1 GTTTGGCTTGAATGA TGTGCCAAGGG GAG CCCTTGGC-CA CTGGATCGAAATTGA hynA 2529080 - 2530717 + | HynA hynC 2530808 - 2531317 + | HynC lysS1 2531571 - 2533085 + | LysS1 TERM 2878 2533561 - 2533537 - g 86 -15.9 -2.70932 | opp_overlap 2533541 TTTTGCCTGGAATTA TTCTTGGCAAG GAA CTTGCCAAGAA CCTTGCCATTTCGGT TERM 2879 2533541 - 2533569 + G 77 -10.3 -3.6502 | opp_overlap 2533537 GCCTGGAATTATTCT TGGCAAGGAACTT GCC AAGAACCTTGCCA TTTCGGTGGGAGATA lolC 2533089 - 2534312 + | LolC TERM 2880 2534335 - 2534358 + G 79 -11 -3.53012 | GGTGAGCGGCTCATG GCCCTTGAAG GCAT CTCCAAGGGC TTTAACACAAAGACC lolD3 2534305 - 2535000 + | LolD3 TERM 2881 2535237 - 2535216 - g 70 -3 -4.83169 | ATGCTTTCAGAAAAA TTTCAGGC TGATGG GGCTGAAA CGGTTCTTATTGAGA HRM2_22410 2534997 - 2537678 + | outer membrane protein (putative surface antigen) HRM2_22420 2537811 - 2538350 + | outer membrane protein (putative Skp protein) lpxD 2538360 - 2539412 + | LpxD TERM 2882 2539495 - 2539511 + G 71 -7.3 -4.10179 | CATTGGTCCCTATGC CATCATC AAG GGTGATG TTTGTATCGGTTCTG lpxA 2539409 - 2540194 + | LpxA HRM2_22450 2540199 - 2541014 + | hypothetical protein TERM 2883 2542130 - 2542112 - g 74 -8.1 -4.08767 | TTGATGGTCCGAAAA CGCCTCG GGGGG CAAGGCG CTGCCTACCGCACGG lpxB 2541011 - 2542201 + | LpxB TERM 2884 2542605 - 2542581 - g 71 -11.5 -2.85361 | opp_overlap 2542578, overlap 2542578 2542577 TGATGGAAAAATTCA GTTCCAATGCC GTG GGCATTGCAAC GGGTGTCATGACCTT HRM2_22470 2542328 - 2543557 + | hypothetical protein TERM 2885 2543566 - 2543538 - f 79 -7.6 -4.35461 | opp_overlap 2543533 2543532 2543531 2543527 GCAACAGGATCAAAA CCTTTGTGTTTA AAAAA TAAACAAAAAGG GGTTGACTTTGTTTA TERM 2886 2543803 - 2543762 - f 70 -5.1 -4.51174 | gap 1, opp_overlap 2543769, overlap 2543769 TCATCAGAATCAAAA GTGATAAGCCGCAGCAGACC AAA GGTCT-CTGCGGCTTTTTTG TTTTTAAGGAGGAAC TERM 2887 2543769 - 2543796 + F 100 -16.4 -5.93252 | gap 1, opp_overlap 2543769 2543762 AATCAAAAGTGATAA GCCGCAGCAGACC AAA GGTCT-CTGCGGC TTTTTTGTTTTTAAG TERM 2888 2543796 - 2543769 - f 100 -16.4 -3.53787 | gap 1, opp_overlap 2543769, overlap 2543762 AATCAAAAGTGATAA GCCGCAGCAGACC AAA GGTCT-CTGCGGC TTTTTTGTTTTTAAG TERM 2889 2544503 - 2544485 - g 71 -11 -2.78073 | overlap 2544465 2544484 ACCAGGGGTAACAAT CGTGGAGG CCC CCTCCACA TCCCAGGCCGCAAGG pheA 2543820 - 2544935 + | PheA aroE1 2544957 - 2545772 + | AroE1 TERM 2890 2545988 - 2546010 + G 74 -8.4 -4.07687 | opp_overlap 2545988 ATTTATTCCATCCAA GGATTTGGCG GAA TGCCAGGTCC TTTTGCAGACCCCAT aroA 2545769 - 2547088 + | AroA aroL 2547085 - 2547606 + | AroL aroC2 2547596 - 2548714 + | AroC2 TERM 2891 2548875 - 2548906 + F 79 -6.6 -4.61868 | overlap 2548876 2548899 CATGTAGATTTATCG AGTCTTTGGGGAGA AGCG TTTCCACAAAGACA TTTTGTATCTGGATG TERM 2892 2548876 - 2548905 + F 76 -10.1 -3.36398 | overlap 2548875 2548899 ATGTAGATTTATCGA GTCTTTGGGGAGA AGCG TTTCCACAAAGAC ATTTTGTATCTGGAT TERM 2893 2548969 - 2548999 + F 83 -11.3 -3.03635 | opp_overlap 2548956 2548964, overlap 2548956 AAGAGACGAAGCGTG TCTTTTGAGTGCT GTGAA AGCACACAAAAGA TATTCAAAGAATTTA TERM 2894 2549753 - 2549764 + F 70 -7.2 -3.85698 | opp_overlap 2549746 AGGAGGAACACCGGT GGCG AAGG CGCC TTTCTGGACCGAAAC TERM 2895 2550635 - 2550653 + F 76 -6.8 -4.56978 | overlap 2550630 CTAACCGGTTTTGAG GGATCAAT TTA ATTGATTC TTTGTTCTTTGACAA TERM 2896 2552254 - 2552238 - f 83 -9.4 -3.93963 | ATGAGTAGCGATAAA GGGGGT GAGAA ACCCCC TCGCCGATAGCCCAA TERM 2897 2553956 - 2553934 - f 74 -10.6 -2.66435 | opp_overlap 2553933, overlap 2553931 ACTTTCAGCAGATTA GGGTCAGATT TAA AATCTGTCCC GTATATTGCCAAGTT TERM 2898 2554135 - 2554104 - f 100 -19.6 -3.87815 | opp_overlap 2554104 2554127 2554130 2554131 GGTTATTTTTATAAA GCCCTGACCATACA TAAC CGTATGGTCAGGGC TTTTTTTATTTGGAA TERM 2899 2554104 - 2554135 + F 100 -18.9 -5.95539 | opp_overlap 2554104, overlap 2554127 2554130 2554131 GGTTATTTTTATAAA GCCCTGACCATAC ATAACC GTATGGTCAGGGC TTTTTTTATTTGGAA HRM2_22560 2554788 - 2556461 + | hypothetical protein TERM 2900 2556509 - 2556527 + T 76 -6.8 -4.41486 | opp_overlap 2556509 AGATAGAAGATTATA TTTGACAG TCA CTGTTAAA TTTCCTTTTATTTTG TERM 2901 2556775 - 2556763 - T 77 -6.3 -4.59591 | AACAAAACATCAAAA GTATC AAT GATAC CAGATCAAATCTTGA HRM2_22570 2557495 - 2556971 - | putative cold shock domain family protein TERM 2902 2558013 - 2558047 + r 100 -20.9 -3.77832 | opp_overlap 2558013 TATACTTTATACAAA GCCCTGACCTTGGGT TGACT ACCTAAGGTCAGGGC TTATTGAGTTTAAAA TERM 2903 2558047 - 2558013 - R 100 -18.7 -4.05747 | opp_overlap 2558013 TATACTTTATACAAA GCCCTGACCTTGGGT TGACT ACCTAAGGTCAGGGC TTATTGAGTTTAAAA lon3 2560465 - 2558057 - | Lon3 TERM 2904 2559402 - 2559414 + g 91 -3.3 -5.75945 | TCCAGGGCGTCATGG TCCCG CTC CAGGA TTTTTTTTGCAAGAT TERM 2905 2559644 - 2559655 + g 76 -5.8 -4.7329 | CTTATCATCCTTGGA GAGC CCCA GCTC TTTTTGAATGATTTT TERM 2906 2560643 - 2560619 - R 93 -12.2 -3.71378 | opp_overlap 2560640, overlap 2560622 GAGGTGACAGGCAAA GAAGCGGAGA CGATC TCTCCGCTCC CCTGGGGTTGATAAA TERM 2907 2560640 - 2560622 - R 89 -10.3 -3.98913 | overlap 2560619 GTGACAGGCAAAGAA GCGGAGA CGATC TCTCCGC TCCCCTGGGGTTGAT HRM2_22590 2560996 - 2560682 - | hypothetical protein TERM 2908 2561331 - 2561368 + H 100 -5.6 -6.18768 | GAAGACATTAGTCAG CCATCACCGGTTCT TTATGTCACC AGAACCAGGGATGG TTTTTTTTATGTTTT TERM 2909 2562480 - 2562468 - g 70 -4.7 -4.7173 | CATCATATCGAAAAA CCGGG AAT CCTGG ATAATCAATTGGACA tbpA 2561377 - 2562510 + | TbpA TERM 2910 2562569 - 2562593 + G 70 -2.1 -4.99043 | ATGGGGTGTGGCTCT TATTCCCCTAA TCT TTCTGGGAGTA TTTTATTTCTACCCC TERM 2911 2564069 - 2564114 + G 100 -5.3 -5.95166 | opp_overlap 2564063 2564060, overlap 2564065 2564063 2564070 2564071 AATGAACTACGGCCA GGCCATGGCTGTCTCTTCCAT GCTC ATGGGGGTGACGGCAATGGGG TTTTTTTTCATTGAA TERM 2912 2564070 - 2564113 + G 79 -8.8 -4.15473 | opp_overlap 2564063 2564060, overlap 2564065 2564063 2564069 2564071 ATGAACTACGGCCAG GCCATGGCTGTCTCTTCCAT GCTC ATGGGGGTGACGGCAATGGG GTTTTTTTTCATTGA TERM 2913 2564071 - 2564112 + G 77 -12.3 -3.07657 | opp_overlap 2564063 2564060, overlap 2564065 2564063 2564070 2564069 TGAACTACGGCCAGG CCATGGCTGTCTCTTCCAT GCTC ATGGGGGTGACGGCAATGG GGTTTTTTTTCATTG thiP 2562537 - 2564162 + | ThiP TERM 2914 2564495 - 2564482 - g 80 -2.3 -5.41787 | overlap 2564484 GAAAAAAGAGAAAAA GGCCG TGAT CAACC GTCGGGTGACCCAGA HRM2_22620 2564162 - 2565250 + | ABC-type transporter, ATP-binding protein glpA 2566879 - 2565314 - | GlpA TERM 2915 2566446 - 2566416 - G 78 -12.6 -2.89971 | opp_overlap 2566413 2566444, overlap 2566411 TCATGATAGATTACA CCACCCTTTAGACC GTC GGTTTTAAGGGTGG GGATCCGTTCCAGGG HRM2_22640 2569253 - 2566965 - | TPR domain protein TERM 2916 2567619 - 2567643 + g 71 -5 -4.47551 | opp_overlap 2567621, overlap 2567621 2567622 CTTTATGTTGAAGAG TATCGCCTCT GTTAG AGGGGTGATG TTTTCTGCCTTCAAT TERM 2917 2567990 - 2568002 + g 73 -3.3 -5.05782 | overlap 2567990 TTTCCCTTTCTGCCT GGGCA AGG TCCCC TTTTTTAAAATGGAT TERM 2918 2568284 - 2568296 + g 70 -3.3 -4.87389 | GGATCTCATCCACCA GAGTC TCT GCCTC TTTGTTTTTCCGGTG TERM 2919 2568949 - 2568939 - G 82 -6.8 -4.8622 | opp_overlap 2568947 TCCTGCAAGGAAAAA GGCT GCC AGCC GGTTCAGCGTTTCAA TERM 2920 2569619 - 2569608 - gH 87 -4.4 -5.47159 | overlap 2569610 GTTGAATATAAAAAA GATG ACGT CATC TGCCGCCAGGGAGAA TERM 2921 2570361 - 2570348 - gH 72 -3.9 -4.82901 | CCTGTGCGATAAAAA TTATG TACT CATAA ACAATACCCAGGAGG TERM 2922 2570819 - 2570808 - gH 87 -4.4 -5.48825 | GATCATTTAAAAAAA GTCA CCAT TGAC CGTTTTACCTCAAAA HRM2_22650 2569464 - 2571437 + | putative esterase of the alpha-beta hydrolase superfamily TERM 2923 2572306 - 2572335 + GT 100 -11.3 -4.08216 | opp_overlap 2572306 ATAGATGCCATGGAA GGGGGCGGGCGCC TTGG GGTGTCTGCCGCC TTTTGCCCGGAATCA HRM2_22660 2571397 - 2572569 + | sensory box histidine kinase/response regulator TERM 2924 2572612 - 2572629 + T 91 -6.9 -5.47846 | CCCCCCCCGTTTCTA CCCGCCA TTAT TGCCGGG TTTTATTTTTTCATT acoB 2573615 - 2572632 - | AcoB acoA 2574614 - 2573628 - | AcoA TERM 2925 2574061 - 2574081 + g 79 -9 -4.19746 | gap 1, overlap 2574061 CAATGTTCTTCATGG C-GCTGGGC GCCT GCCCAGCAG TTGTTTTCGCATACA HRM2_22690 2574881 - 2575276 + | hypothetical protein TERM 2926 2575379 - 2575393 + F 76 -2.8 -5.37345 | TTAACCTTAACGACC CCAG CTTGATA CTGG TTTTTTCTCCTTGCA TERM 2927 2575749 - 2575737 - g 71 -10.5 -3.08032 | overlap 2575734 GGCCGGTGAAAAGCA CCGGG TCA CCCGG GTGGGGGCGCCACTG TERM 2928 2576774 - 2576790 + G 72 -10.1 -3.35371 | opp_overlap 2576773 2576769, overlap 2576754 CCCTGATGAATCGAC GGGGGGA TCT TCCCCTC TTGATTCGCCATCTC HRM2_22700 2575468 - 2577195 + | sigma-54 dependent transcriptional regulator (PAS domain protein) HRM2_22710 2577512 - 2577946 + | response regulator protein (CheY-like protein) hdrL2 2577948 - 2581370 + | HdrL2 mvhD6 2581383 - 2581805 + | MvhD6 TERM 2929 2582372 - 2582382 + G 76 -6.8 -4.56597 | opp_overlap 2582374 TGACCAGCCCGATGA CACC CTG GGTG TTTTTGCCGGAACAG fdhB6 2581818 - 2582945 + | FdhB6 TERM 2930 2583118 - 2583137 + G 75 -9.2 -3.9243 | overlap 2583120 GACCTTGATTGATGC TGCCCCCC ACAT GGGGGGTG TTCTTTCAAAGCTTG TERM 2931 2583120 - 2583135 + G 82 -11.8 -3.54755 | overlap 2583118 CCTTGATTGATGCTG CCCCCC ACAT GGGGGG TGTTCTTTCAAAGCT TERM 2932 2585123 - 2585096 - g 80 -13.4 -2.87344 | overlap 2585100 GAGTTTGCTGAGATA CACAGGGACCAG CCAC CTGGCCCCAGTG TCAGGATGGGGCTTG TERM 2933 2585119 - 2585100 - g 74 -11.4 -3.05022 | overlap 2585096 TTGCTGAGATACACA GGGACCAG CCAC CTGGCCCC AGTGTCAGGATGGGG hdrA4 2583011 - 2586496 + | HdrA4 TERM 2934 2586560 - 2586531 - g 74 -7.1 -4.28651 | overlap 2586544 ATGAAAAGGTTAAAA GCGGCCCTGAATA CCTG TATCCAGTGCGGC ACCTGCACGGGATCA TERM 2935 2586802 - 2586783 - g 80 -4.9 -5.10077 | opp_overlap 2586785, overlap 2586785 AAAGACCTTAAAAAA CACCGGG AGAGTA CCCGGTT TTATGCAAGTTTCAT TERM 2936 2586785 - 2586800 + G 76 -7.5 -4.41241 | opp_overlap 2586785 2586783 AGACCTTAAAAAACA CCGGG AGAGTA CCCGG TTTTATGCAAGTTTC TERM 2937 2586800 - 2586785 - g 74 -7.5 -4.16351 | opp_overlap 2586785, overlap 2586783 AGACCTTAAAAAACA CCGGG AGAGTA CCCGG TTTTATGCAAGTTTC hdrD2 2586507 - 2587034 + | HdrD2 hdrD2' 2587031 - 2587921 + | HdrD2' HRM2_22780 2588593 - 2588153 - | integrase (catalytic domain) TERM 2938 2589380 - 2589390 + G 70 -3.2 -4.84359 | GCTGGATCCCTTTGT CACG GCA TGTG TTTTTCTGGCCATGC HRM2_22790 2589129 - 2590397 + | hypothetical protein TERM 2939 2590481 - 2590493 + T 91 -10.5 -4.128 | GAACCATACCTCGTT CCGGC CGT GCCGG TTTATATGTAACACT HRM2_22800 2592126 - 2590870 - | transposase for insertion sequences IS116, IS110 and IS902 (IS111A/IS1328/IS1533 family protein) TERM 2940 2591089 - 2591106 + g 86 -2.7 -5.5604 | gap 1 CAGTTTGTAATATTT GGC-CTTG TAA TAAGAGCC TTTTTTCTTGATTGC TERM 2941 2591483 - 2591495 + g 100 -5.5 -5.7946 | overlap 2591484 CCATTAAGGCTTTTA TGCAG TTC CTGCG TTTTTTTCTTAAGGC HRM2_22810 2592310 - 2592957 + | hypothetical protein asnB 2595161 - 2593233 - | AsnB TERM 2942 2593301 - 2593290 - G 80 -2.2 -5.46698 | opp_overlap 2593294, overlap 2593294 TTCAAAAGCAAAAAA TGAC CAGA GCCA TCTGCTGTGCTTTCG TERM 2943 2593850 - 2593860 + g 72 -4 -4.79223 | TACTCCGAATACGGA TGAA ATA TTCA TTTTTACTCATATGC TERM 2944 2594342 - 2594357 + g 80 -4.6 -5.1287 | CAACATCGCTTATGA GCTGTG ACGA CACCGC TTTTTTCAATATAGA TERM 2945 2595607 - 2595551 - H 100 -30.6 -3.6707 | gap 1, opp_overlap 2595553 2595562, overlap 2595553 ATTTAAGAGTTGAAA TATGCACTCAACCCGGCACTGGCACAA CATG TTGTGCCAGTGCCGGGTTGAGT-CAAA ACATTCCTGGAATAA TERM 2946 2595553 - 2595610 + H 84 -11.7 -3.16683 | gap 4, opp_overlap 2595551 2595553 2595609, overlap 2595562 TTAAGAGTTGAAATA TG----CACTCAACCCGGCACTGGCACAA CATG TTGTGCCAGTGCCGGGTTGAGTCAAAACA TTCCTGGAATAAAAT TERM 2947 2595605 - 2595553 - H 100 -33.2 -3.41302 | gap 1, opp_overlap 2595553 2595562, overlap 2595551 TTAAGAGTTGAAATA TGCACTCAACCCGGCACTGGCACAA CATG TTGTGCCAGTGCCGGGTTGAGT-CA AAACATTCCTGGAAT TERM 2948 2595562 - 2595597 + H 100 -27.8 -3.05715 | opp_overlap 2595553 2595551, overlap 2595553 GAAATATGCACTCAA CCCGGCACTGGCACAA CATG TTGTGCCAGTGCCGGG TTGAGTCAAAACATT mdlA 2596026 - 2597348 + | MdlA HRM2_22840 2598956 - 2597352 - | hypothetical protein TERM 2949 2597591 - 2597601 + g 74 -6.8 -4.32857 | opp_overlap 2597582, overlap 2597583 ACTCAATGAATACCG GGGA TAT TCCC TTTCTCTTTGCAAGA HRM2_22850 2601089 - 2599314 - | SLC13A transporter family protein (TrkA domain protein) mscC4 2601919 - 2601110 - | MscC4 TERM 2950 2601151 - 2601179 + g 74 -3.7 -4.98616 | overlap 2601161 2601169 CCCTTTGGGGATATG GGATGCTGATGCC ATT GGCATCAAAGGCC TTTTTGATGTTTTCC TERM 2951 2602154 - 2602137 - g 76 -6.9 -4.48902 | ACACAGGCAAACAAA CTCCAGC AGGA GCGGGAG AATACATATCGAGAG HRM2_22870 2602083 - 2602460 + | hypothetical protein TERM 2952 2602862 - 2602852 - g 73 -3.2 -4.91109 | TCCGGACGACAAAAA CAGT TTG ACCG GCTCTTTTTCTGGCG TERM 2953 2603384 - 2603401 + G 81 -5.7 -4.93365 | opp_overlap 2603383 2603384 AAATGAGAAATATAT CAAAATT CTAC AATTTTG TTTTTCCTTCTCCAA TERM 2954 2603943 - 2603926 - g 91 -5.5 -5.40474 | opp_overlap 2603926 2603928, overlap 2603928 ATTGTTTCAAAAAAA CCCATCC TCCC GGATGTG TTTTCCGCAATTGCC HRM2_22880 2602513 - 2604519 + | signal transduction family protein (GGDEF domain protein) HRM2_22890 2604546 - 2604842 + | hypothetical protein TERM 2955 2606682 - 2606658 - gf 73 -10 -3.01791 | ATGTCGGTTCGAAGA CGTGGGGTAT TGTTC ATCCCCCACG ATTACACACGCCTTG trkA3 2604843 - 2607356 + | TrkA3 TERM 2956 2607687 - 2607724 + GF 72 -7.6 -3.75169 | gap 1, opp_overlap 2607687 ATCACTTTGTCGAAA CCTGCC-GCTGCCTTGG CATCC CCACGGCAACCGGCCGG TTTCGTACCGTGATG TERM 2957 2607724 - 2607687 - gf 78 -9.8 -3.5393 | gap 1, opp_overlap 2607687 ATCACTTTGTCGAAA CCTGCC-GCTGCCTTGG CATCC CCACGGCAACCGGCCGG TTTCGTACCGTGATG dtd 2607275 - 2607811 + | Dtd TERM 2958 2607820 - 2607833 + F 71 -9.5 -2.90442 | opp_overlap 2607819 2607811, overlap 2607819 GGAATAGAACCATAT CCGCC CTGG GGCGG CTTGTTCATATTGTT TERM 2959 2607984 - 2608002 + G 90 -5.9 -5.32882 | TTTGAATTCATCCAT CGGTTCC AAGGC GGCACCG TTTTTTGTGATCATG TERM 2960 2609991 - 2609973 - g 71 -5.3 -4.51174 | TGACTATAACGAAAA CCAGATT GGACG AATCCGG GATGATTCTTCAAAA pit 2607874 - 2610126 + | Pit HRM2_22930 2611718 - 2610159 - | 4Fe-4S ferredoxin, iron-sulfur cluster binding protein TERM 2961 2610238 - 2610228 - G 90 -8.2 -5.00616 | opp_overlap 2610227 2610228, overlap 2610205 2610229 CTGTTTTTGAAAAAA CGGG GGA CCCG ATTGTTCGTGGGCCG TERM 2962 2610605 - 2610578 - G 100 -17.8 -3.51232 | opp_overlap 2610575 2610575, overlap 2610574 TGCGGTTGAAATCAA GGCCTGGCTGAA TAAT TCCAGCCAGGCC AAAGTTGTTGATTCC TERM 2963 2611080 - 2611066 - G 73 -3.4 -5.04987 | overlap 2611067 2611068 AAGAGGCTGAAAAAA GCGCCC ACA GGGCAA AGGGTATTGCAGTAA HRM2_22940 2612650 - 2611715 - | hypothetical protein TERM 2964 2611840 - 2611828 - G 74 -4.7 -4.8048 | overlap 2611829 GTTCCAGACCAAAAA TCCGG GCA CCGGC AGCATCAATGGCAAC TERM 2965 2613650 - 2613636 - g 80 -2.1 -5.4477 | overlap 2613637 AAACTGGGAAAAAAA CCGAT CATCT ATCGA AAGGTCGGAGAAAAA ppsA5 2612880 - 2615306 + | PpsA5 HRM2_22960 2615873 - 2615331 - | putative translation initiation factor 1A-3 (aIF-1A-3) TERM 2966 2617089 - 2617124 + G 86 -14.6 -3.14683 | opp_overlap 2617113 TCACCCTGCTGGATG CCGCCCGGGCCATGAT CTAT ACCACGGCCCGGGCCG TTGATGGAAAAATCT acd8 2616203 - 2617447 + | Acd8 HRM2_22980 2617488 - 2617826 + | hypothetical protein glnH3 2618019 - 2618765 + | GlnH3 glnP6 2618849 - 2619520 + | GlnP6 TERM 2967 2619882 - 2619870 - g 70 -2.7 -4.87786 | TCAAGGTTAGAAAAA TTGCT CGT AACAA TGCCGAATCCCTGGG TERM 2968 2620108 - 2620091 - g 78 -2.6 -5.32565 | overlap 2620093 GAAGTAATGAAAAAA CTTGCC GCAGAA GGCATG ACCATGGTTGTGGTA glnQ5 2619542 - 2620276 + | GlnQ5 HRM2_23020 2620278 - 2621435 + | hypothetical protein TERM 2969 2622288 - 2622258 - g 76 -7.4 -4.41348 | opp_overlap 2622261 2622262, overlap 2622260 2622261 CCTGTGCCAAAGAAA CACCCCTCCCCGGT TGC ACCGGGGGGCATTG TTCAATCCCAGGCAA TERM 2970 2622262 - 2622284 + G 71 -11.2 -2.80344 | opp_overlap 2622261 2622260 2622258, overlap 2622261 TGCCAAAGAAACACC CCTCCCCGGT TGC ACCGGGGGGC ATTGTTCAATCCCAG TERM 2971 2622354 - 2622378 + G 100 -4.9 -5.69262 | opp_overlap 2622357, overlap 2622357 CTGAAAGAAAGACAA AAAGGCAGGTC CTG GGCCTACCTTG TTTTTATTTTTATCG TERM 2972 2622357 - 2622375 + G 82 -6.6 -4.855 | opp_overlap 2622357, overlap 2622354 AAAGAAAGACAAAAA GGCAGGTC CTG GGCCTACC TTGTTTTTATTTTTA TERM 2973 2622375 - 2622357 - g 100 -6.6 -5.30448 | opp_overlap 2622357 2622354 AAAGAAAGACAAAAA GGCAGGTC CTG GGCCTACC TTGTTTTTATTTTTA exeA2 2621445 - 2623112 + | ExeA2 TERM 2974 2623312 - 2623292 - g 73 -6.1 -4.59109 | opp_overlap 2623299 2623300 TATATCTTTGAAAAA CTGGATATC TGT GATGCCCAG GGCATTCAGCAGGTT rfbB 2623109 - 2624161 + | RfbB ppsA6 2627076 - 2624365 - | PpsA6 TERM 2975 2624845 - 2624856 + g 74 -4.4 -4.86621 | overlap 2624823 2624821 TGAAATATTTTTCAC GAAC AGGA GTTC TTTTTCATTGCAGGT TERM 2976 2625652 - 2625627 - G 73 -10.4 -3.28791 | opp_overlap 2625610 AGCCCCTTGCCACAA GGGCCGCATG GCTTGT CATGCCGCCC CTTGCAGTGAGAATG TERM 2977 2627222 - 2627239 + GH 73 -2.7 -5.00616 | gap 1, opp_overlap 2627216 AATCAATATCAAAGG GCT-TTGG CGG CCAGGAGC TTTTTTCCGACACAG TERM 2978 2628057 - 2628034 - gH 72 -7.4 -4.07568 | opp_overlap 2628034 2628036 2628038 GCCTTTGCCGGAAAA CAGGTCATCC AGGT GGACGATCTG TGCTTTGCCCATGAT HRM2_23060 2627194 - 2629038 + | ATP-type transporter, ATP binding protein (ATPase) HRM2_23070 2628923 - 2629261 + | hypothetical protein TERM 2979 2629765 - 2629780 + G 74 -4.6 -4.85599 | opp_overlap 2629765 CGGAAAACGATGTAA TCCAGG CCTA CCGGGA TTTTTATAAAATCAG pilB 2629302 - 2631521 + | PilB wecB 2631563 - 2632663 + | WecB TERM 2980 2632826 - 2632840 + G 71 -7.2 -4.07885 | opp_overlap 2632833 CTCTGTTGAGGAATT TAAACG AGC CGTTTA TTTTACGGCAACCTC TERM 2981 2633381 - 2633392 + G 74 -4.4 -4.77719 | opp_overlap 2633389, overlap 2633389 TCTTGAAGCGGCCGG TTCC AAAT GGAA TTTTCTTCCCTTTTC wecC 2632653 - 2633945 + | WecC TERM 2982 2633952 - 2633978 + F 83 -11 -3.53444 | opp_overlap 2633960, overlap 2633953 2633960 CGGCTTTGATTCATT AGGGGAAATATT TTA AATATTTCCCCA TTTACAGGAAAATCC TERM 2983 2633953 - 2633977 + F 100 -14.5 -2.71924 | opp_overlap 2633960, overlap 2633952 2633960 GGCTTTGATTCATTA GGGGAAATATT TTA AATATTTCCCC ATTTACAGGAAAATC ispL 2633994 - 2635022 + | IspL HRM2_23120 2635542 - 2635012 - | hypothetical protein TERM 2984 2635072 - 2635092 + g 70 -8.3 -3.70104 | overlap 2635075 GTACTGCTGGCGGTA CATTCCAAG CTG CTTGGACTG TTCTATTCCCTGCTT HRM2_23130 2636231 - 2635539 - | hypothetical protein TERM 2985 2635825 - 2635799 - G 70 -9.3 -3.62224 | opp_overlap 2635817 2635818 ATACCCCTCGAACAA GGGCCAGGGCA TCGTC TGCCCGGGCAC CGGATTTGGAAGATT maf 2636871 - 2636224 - | Maf rbr2 2637377 - 2636901 - | Rbr2 TERM 2986 2637660 - 2637672 + H 80 -10.5 -3.48276 | GAGCCATATCTTGCT CCGGC CAT GCCGG TTATATACAGACCAG rhlE2 2637722 - 2639104 + | RhlE2 HRM2_23170 2639150 - 2639437 + | hypothetical protein HRM2_23180 2639450 - 2639821 + | hypothetical protein TERM 2987 2639895 - 2639860 - f 71 -9 -3.35526 | overlap 2639855 TAAGGATAAACCCAA TTCCAGGCAGAAGCTT GGCC AGGCCACTGCCTGAAA CGGATGCGTAAAACA TERM 2988 2639976 - 2639991 + F 100 -5.4 -6.28401 | TCATCTGTCTTTGGC CCGCAA TCCT TTGTGG TTTTTTTATTTTTTA cbiP 2640021 - 2640824 + | CbiP TERM 2989 2641269 - 2641279 + G 86 -8.2 -4.64861 | ATCCTGCCTGTTGCT GGGC CTG GCCC TTTATTTTACGGAAA cbiM 2640826 - 2641437 + | CbiM cbiN 2641434 - 2641994 + | CbiN cbiQ1 2641987 - 2642742 + | CbiQ1 cbiO1 2642747 - 2643481 + | CbiO1 TERM 2990 2643514 - 2643473 - T 100 -17.5 -3.9009 | overlap 2643464 2643475 AACCGACCCCATAAA CACATTTAGGGGGACAGAT GTAA ATCTGTCCCCCTAAACGAA ATAAAATGAAACTCG TERM 2991 2643512 - 2643475 - T 100 -22.3 -3.53733 | overlap 2643464 2643473 CCGACCCCATAAACA CATTTAGGGGGACAGAT GTAA ATCTGTCCCCCTAAACG AAATAAAATGAAACT ahcY 2645165 - 2643726 - | AhcY TERM 2992 2644995 - 2645006 + g 85 -7.2 -4.81551 | TCCCATGATCTTGAA CCCC TTGA GGGG TTTTTCCTGTCCGTA metK 2646360 - 2645194 - | MetK TERM 2993 2645841 - 2645887 + g 80 -3.1 -5.25803 | gap 1, overlap 2645863 CGTTCACATACTCGA TGGTTACCTGGGATTTTCCG TCGGGTCT CAGAAAAT-CCAGGGACCCA TTTTTTCTCACCCTT TERM 2994 2646223 - 2646241 + g 83 -5.3 -5.0916 | gap 1, overlap 2646226 GGTGGTTACCAGGGT CTCGCAGG CAAC CCTGC-AG TTTTTATCTTCAGCC TERM 2995 2646467 - 2646439 - H 88 -6.8 -5.20333 | opp_overlap 2646447 TATGTATAATAAAAA GAAAATAACCCC TGGGT GGGATTTTTTTC AATAAAATCAAGGAG TERM 2996 2646782 - 2646799 + G 80 -9.9 -4.12133 | overlap 2646771 2646792 GAGGCGGCCCTGAGG CGGTTCA ATGT TGAACCG TTGTTTAATGTTTCG HRM2_23260 2646488 - 2647465 + | predicted SAM-methyltransferase HRM2_23270 2648423 - 2647449 - | PfkB-family carbohydrate kinase TERM 2997 2647807 - 2647824 + g 74 -2.6 -5.21709 | overlap 2647809 CGTCTTGCAGCCCAT CCCCTG ATGGCG CAGGCG TTTTTTGATGTGGCC TERM 2998 2648523 - 2648509 - g 76 -8.6 -4.25658 | overlap 2648506 ATTCCATCAAAACAA CCTTTG ACT CAAAGG CAGGTGATCATGTCG TERM 2999 2650105 - 2650141 + G 87 -8.6 -4.90525 | overlap 2650098 2650132 AACGGTCTTCCCCTG GGGATTCATGCCATGG CATCC CCCTGGCAGGAGACCC TTTTGTTTCGACTTG gatA1 2648461 - 2650215 + | GatA1 ispF 2650389 - 2650892 + | IspF TERM 3000 2650886 - 2650870 - f 76 -7.9 -4.1347 | opp_overlap 2650869, overlap 2650872 TCTTAATCACAGAAA TAGCGGC ACA GCCGCGA GTATGATGGCCCACA TERM 3001 2650884 - 2650872 - f 82 -10.5 -3.66117 | opp_overlap 2650869, overlap 2650870 TTAATCACAGAAATA GCGGC ACA GCCGC GAGTATGATGGCCCA TERM 3002 2652096 - 2652114 + G 70 -8.8 -3.57119 | GGGGAAACCGTGAGC CCGGAGAC ATT GTCTGCGG TTTCAACCCTGTGTG cysS2 2650950 - 2652383 + | CysS2 TERM 3003 2652392 - 2652422 + T 77 -10.5 -3.08966 | gap 1 CGGATAGTGGGTTGA CGGAGCCAGA-GTT GCAG ACCGTCTGGCTCCG TTGAATCAAATTTAG glnS 2654147 - 2652477 - | GlnS TERM 3004 2652607 - 2652619 + g 76 -4.8 -5.00616 | ACGTTTTCAGCAGTT GCCT GGGCA AGGC TTTTTTCCACCCGGG TERM 3005 2655601 - 2655547 - g 90 -13.6 -3.89822 | gap 1, opp_overlap 2655548 CATTGAGGTCAGAAA GGCGACCACCCAGGTGGACGATCTC TATGAG GAGATCGTCAAGC-GGGTGGAGGCC GAAGAGCGGGTTCTG uvrB1 2654270 - 2656261 + | UvrB1 TERM 3006 2656413 - 2656383 - g 76 -3.3 -5.09426 | gap 2 CTGAACCTGAAAAAA CGGCTCGCCTCTTAC TTT GCAAG-GGAGA-CCG GCCATGACATGAAGA TERM 3007 2657971 - 2657952 - g 73 -2.8 -4.94243 | overlap 2657954 GGAAAAAAACGAAAA CAGGTGCT GATG ACCACCTA CAAGGGAATTAGCCG uvrC 2656266 - 2658086 + | UvrC TERM 3008 2658443 - 2658457 + G 70 -2.8 -4.80455 | GATCCACCGGCCCAT TCCC CATACCC GGGA TTTTCTGTTTCACTC HRM2_23340 2658090 - 2658962 + | periplasmic soluble lytic transglycosylase fused to ABC-type amino acid-binding protein (SLT domain fusion protein) HRM2_23350 2660262 - 2658928 - | putative hydrolase (haloacid dehalogenase-like family protein) TERM 3009 2658990 - 2659019 + g 77 -12.1 -3.09516 | gap 1, opp_overlap 2658979 CATAGTGGACCGGTT CCC-ACCCCCTGGC ATA GCCGTGGGGTAGGG TTCGATAGTAGCGAA TERM 3010 2660158 - 2660168 + g 100 -6.8 -5.75342 | overlap 2660155 AGCGGTGATCATGCG CAGG GTG CCTG TTTTTTTTACACGAA parC 2662580 - 2660319 - | ParC TERM 3011 2660946 - 2660933 - G 95 -2.3 -5.96521 | ATGAATCAAAAAAAA CAGCC GGCC GGTTG CTCATGGTGGGTGCG parE 2664536 - 2662581 - | ParE TERM 3012 2662935 - 2662952 + g 87 -9.9 -4.3739 | opp_overlap 2662948 GAACAGGGGCGGCAT GGCCATA AAGA TATGGCC TTTTCTGACCACCTC TERM 3013 2663325 - 2663346 + g 73 -2.9 -4.95854 | overlap 2663326 AAGGGCCGGACCGTT AGTGATTCG TTTT CGGGTCACC TTTTTGGCTTTTTTA TERM 3014 2663941 - 2663954 + g 74 -3.8 -5.01732 | GCCTTGGCCTTTAAC GCGT GTTTCA ACGC TTTTTTAGAAAAATT HRM2_23380 2664619 - 2664984 + | hypothetical protein TERM 3015 2665147 - 2665167 + G 74 -11.1 -3.05844 | opp_overlap 2665146 2665145 2665157 TGTCCGTTCGAAATC GGGCAAGGG AGG CCCTTGGCC TGTTCAAATCAAAGA TERM 3016 2667853 - 2667837 - g 76 -6.5 -4.46233 | overlap 2667833 GCAAGGGGAAAGAAA CAGCTGC TTT GCAACCG GTTCAAGGCCCAGTG cyaA2 2664981 - 2668889 + | CyaA2 mthZ 2670004 - 2668922 - | MthZ TERM 3017 2669074 - 2669091 + g 91 -2.7 -5.84432 | CGAAACCATGGGTGT CGTTAAA GTGC TTGAACG TTTTTTTCTCTTGTC TERM 3018 2669769 - 2669750 - G 77 -10 -3.68886 | ATTAATGCAGGCAAA GGATCCCG GGGC CAGGATCC GATAGGTTTCCTGCC HRM2_23410 2670687 - 2670001 - | hypothetical protein TERM 3019 2670475 - 2670493 + g 70 -4.5 -4.62069 | opp_overlap 2670475 TGCCTTGACAAAAAG GGCAGCA ATGGC TTCTGCC TTTTTAAAGTAGGGG TERM 3020 2670635 - 2670663 + g 91 -5.4 -5.43414 | gap 1, opp_overlap 2670635 TCACCGCTTTTAAAG TCGT-CAATGGGA TATT TCCCATTGGAAGA TTTTTTCTGTCTCAT HRM2_23420 2671036 - 2671521 + | rRNA methylase-family protein TERM 3021 2671682 - 2671662 - g 71 -6.1 -4.31835 | opp_overlap 2671679 AAGGTGGACAAGAAA TCCATGAAG GAA CTCCTTGGA ATGTCCACCTTTGTT HRM2_23430 2671554 - 2672363 + | hypothetical protein TERM 3022 2672695 - 2672709 + G 74 -7 -4.41348 | opp_overlap 2672693, overlap 2672693 TTGTCATTGAAATGC CGGCAG GAT CGGCCG TTTATTTCAGCAGAA lonB 2672376 - 2674763 + | LonB recD1 2677412 - 2674932 - | RecD1 TERM 3023 2675058 - 2675037 - G 78 -10.1 -3.85698 | opp_overlap 2675012 2675039, overlap 2675039 TCTTGTTCCCACAAA CAGGGCCAG GGTT CTGGCCCTT GTCAGTCCCGTATAA TERM 3024 2675039 - 2675056 + g 82 -12.7 -3.36505 | opp_overlap 2675039 2675037, overlap 2675012 TTGTTCCCACAAACA GGGCCAG GGTT CTGGCCC TTGTCAGTCCCGTAT TERM 3025 2675056 - 2675039 - G 83 -12.7 -3.51934 | opp_overlap 2675012 2675039, overlap 2675037 TTGTTCCCACAAACA GGGCCAG GGTT CTGGCCC TTGTCAGTCCCGTAT TERM 3026 2675874 - 2675892 + g 75 -10.3 -3.41745 | opp_overlap 2675873 AAACGGCGATTCAAT CCAGGGT ATTTC ACCCTGG TTGATCTTGTGGGCA TERM 3027 2676281 - 2676269 - G 73 -9.1 -3.71848 | opp_overlap 2676245 TGGGCGCAGCAAGAA GGACG CTG CGTCC CATGGCCCGGATCAA cspB1 2677646 - 2677846 + | CspB1 TERM 3028 2677907 - 2677939 + F 100 -13.5 -5.93809 | opp_overlap 2677907 GATAATTTAAAGAAA GAGAGTTCCTGGGAA AAT TGCCTGGGAACTCTC TTTTTTTTATGGGAA TERM 3029 2677939 - 2677907 - f 93 -9.1 -4.51765 | opp_overlap 2677907 GATAATTTAAAGAAA GAGAGTTCCTGGGAA AAT TGCCTGGGAACTCTC TTTTTTTTATGGGAA HRM2_23470 2678131 - 2678331 + | hypothetical protein efp2 2679067 - 2678501 - | Efp2 dhaA 2680040 - 2679075 - | DhaA TERM 3030 2679476 - 2679456 - G 77 -10.5 -3.53012 | GGCTGCCCTGGCAAA GAGATTCAG GCC CTGAATCCC TGGAATGGCAAACCA fabH1 2681086 - 2680034 - | FabH1 TERM 3031 2680862 - 2680874 + g 71 -6.2 -4.39002 | AGGATCGATTCCAGC GGCC TCAAT GGCC TTTTGTCCAGCCTTT TERM 3032 2681011 - 2680995 - G 82 -6.5 -4.88067 | opp_overlap 2681010, overlap 2680997 ACCGATTCATAAAAA GGGGCAA GCC TTGCCTC GATCTCATCGGTTGT HRM2_23510 2686688 - 2681094 - | putative multi-domain beta-ketoacyl polyketide synthase TERM 3033 2682504 - 2682514 + g 91 -3.2 -5.72622 | overlap 2682494 AAGGGCAGGGTGCTC CATC CCG GGTG TTTTTTGTTTCTCAA TERM 3034 2684049 - 2684062 + g 70 -3.1 -4.8667 | AAGGGCTCGTCTGGG CAGAT TCTT GTCTG TTTTTGTCCAATATG TERM 3035 2684150 - 2684140 - G 74 -8.2 -4.11394 | overlap 2684118 ATCGGAGTGTTAAAA CCGG GAA CCGG TGGAATGATATGGTG TERM 3036 2684599 - 2684615 + g 79 -7.9 -4.52589 | overlap 2684601 2684609 CAGGCACCTTCAGAC GGCAGGG TTC CCCTGGC TTTTCTGTCAAAGGG TERM 3037 2684648 - 2684628 - G 79 -11.1 -3.53012 | opp_overlap 2684609 GGCTTTTCTGTCAAA GGGCAGGGT CTC ATCCTGCCC GGAAAAGGGGGTCAG TERM 3038 2686194 - 2686178 - G 90 -10.1 -4.56775 | AGCTTCCTCCAAAAA GTCCCAG AGC CCGGGAC AATATCGTGGCAGGC TERM 3039 2686781 - 2686771 - R 71 -6.8 -4.12942 | GGAAAGGGGGGAAAA GCCT GGA AGGC ATAAACGATAAAAAA HRM2_23520 2687895 - 2686948 - | hypothetical protein TERM 3040 2687103 - 2687090 - G 70 -2.3 -5.01732 | opp_overlap 2687100 2687100, overlap 2687100 2687101 AAGTGGGCCAAAAAA CCGCT AAAA AGGGG TAAGGTATAGTATAC TERM 3041 2687199 - 2687182 - G 83 -3.3 -5.52347 | overlap 2687185 AACAAAAGCAAAAAA GGAGGCA AAGA TGCCCAC ATATAAAATGGATAC HRM2_23530 2688691 - 2687972 - | putative rhomboid-family protein (ventrhoid transmembrane protein) HRM2_23540 2689221 - 2688688 - | hypothetical protein TERM 3042 2689507 - 2689487 - g 86 -6.1 -5.09426 | overlap 2689490 GTCAACGGTAAAAAA CAACCCATG ACC CATGAGGTG CAGCACGGGGACCGG TERM 3043 2689504 - 2689490 - g 76 -6.4 -4.63993 | overlap 2689487 AACGGTAAAAAACAA CCCATG ACC CATGAG GTGCAGCACGGGGAC moeD 2689325 - 2689555 + | MoeD moeB1 2689559 - 2690248 + | MoeB1 TERM 3044 2690458 - 2690474 + G 70 -2.2 -5.02074 | CTGGGAGGTGATGAG GGATGT TTTTT ACAACC TTTTTTCCGGCATCA HRM2_23570 2690267 - 2691001 + | putative NAD-dependent deacetylase (Sir2-family protein) TERM 3045 2691090 - 2691100 + F 71 -8.2 -3.54919 | overlap 2691097 2691099 GCAGAGACGCTGTTC CGGC CAT GCCG TTTAAACGGGTCGTT TERM 3046 2692332 - 2692312 - g 79 -7.6 -4.55295 | CTGGTGATAAATAAA GAGGACAT TGACT ATGCCCTC GCGATTATTCAGGAA rocD1 2691172 - 2692359 + | RocD1 TERM 3047 2692663 - 2692679 + G 78 -2.3 -5.24129 | CTTTCGGAAACCGGT CACTT CAGGGCA AAGTG TTTTTTCTGGGCCGA TERM 3048 2693324 - 2693305 - g 78 -3.5 -5.06451 | GATTATTCCAAAAAA GCCCTGT GGCAAT ACATGGC AGACATCTTTCTTCT TERM 3049 2694395 - 2694410 + G 83 -5.4 -5.19212 | opp_overlap 2694393, overlap 2694396 ATGTTCGAAGACAGG TCATGG TGCC CCATGG TTTTTTCCTCATGGT TERM 3050 2694505 - 2694525 + G 77 -8.9 -4.00411 | opp_overlap 2694499 2694501, overlap 2694523 GAGCAAAATGAGGCC CTGGCCACC CGG GATGGCCGG TTCTTTGCCGTTTTC TERM 3051 2694621 - 2694634 + G 82 -6.7 -4.83169 | overlap 2694597 GGGTACCCAGAAGGC CAAGG CACC CCTTG TTTTTCTGCCAGGCT TERM 3052 2695588 - 2695606 + G 71 -6.6 -4.18197 | CCCTGGTTCCTTGAC TGGGGCAG GGA CAGCCTCA TTTTCAGTCGGGCCT TERM 3053 2695755 - 2695731 - g 74 -11.5 -3.17688 | opp_overlap 2695731 2695733 TAATGATGCCAGGAA CAGGGAAACAT CGG ATGCTCCCCTG TGGTTTATTGCAGCA HRM2_23590 2692384 - 2696688 + | predicted transmembrane fusion protein, alpha-amylase domain and alpha-1,6-glucosidase domain (glycogen debranching enzyme activity) TERM 3054 2697584 - 2697567 - g 78 -4.1 -5.20216 | overlap 2697559 2697568 CAGATCATGAAAAAA TTCCATG TGAA CATGGAC GCTGCCTTTGAAACA TERM 3055 2698530 - 2698511 - g 82 -10.6 -3.86194 | AACCTCGGGCATAAA GGCAGCCG TTAA CGGCAGCC TCAACCTGAGCATCC glgP2 2696691 - 2699246 + | GlgP2 TERM 3056 2699536 - 2699551 + GF 70 -2.4 -5.00616 | opp_overlap 2699537, overlap 2699537 ATCGATCCATTATCA ACGGGT ACCT GCCCGA TTTTTTCAGCAGGGA TERM 3057 2700250 - 2700260 + GF 82 -6.8 -4.84359 | opp_overlap 2700250 TTGAACCCGACGAGA CAGC CCC GCTG TTTTTCTGGCCCTCC glgA1 2699337 - 2700845 + | GlgA1 TERM 3058 2701321 - 2701333 + GF 73 -3.4 -5.03994 | CGTCACTCCTCTCCT GATC CTGCC GATC TTTTTATCTATGAGA glgB2 2700811 - 2702844 + | GlgB2 HRM2_23630 2702956 - 2703399 + | hypothetical protein HRM2_23640 2703413 - 2704468 + | ParA family protein HRM2_23650 2704485 - 2705108 + | putative lipase/hydrolase HRM2_23660 2705108 - 2705767 + | ABC-type transporter, ATP-binding protein TERM 3059 2705808 - 2705821 + G 76 -4.5 -5.02323 | opp_overlap 2705808 GGAGATCCTCAAGAA CAGGG GTTT CTCTG TTTTCTTTATCCTGA TERM 3060 2706204 - 2706190 - g 73 -11.4 -2.8805 | ATGACCCGGGATACA GCCCAG GCC CTGGGC GTTGAAAACCAACCA TERM 3061 2706977 - 2706954 - g 73 -8.8 -3.65812 | opp_overlap 2706959 2706966 GGCCGGGGAACAGAA CGCTACAAGG CTTG CCCTGTGGCG GGGCCTGGGTTTTGT TERM 3062 2707064 - 2707084 + G 83 -5.3 -5.09895 | overlap 2707065 GGGCCACTGTATTTG TGGCAGGGT TTG GCCTTGCCC TTTTTTCCATGGCTG TERM 3063 2707065 - 2707083 + G 70 -8.8 -3.65214 | overlap 2707064 GGCCACTGTATTTGT GGCAGGGT TTG GCCTTGCC CTTTTTTCCATGGCT TERM 3064 2707593 - 2707610 + G 76 -8.5 -4.18494 | opp_overlap 2707582 CAAGGGAAGGCCCCT TTCCAGA ACAA TCTGGAA TTTTGGCTCAGGATC HRM2_23670 2705767 - 2708340 + | ABC-type transporter, permease protein HRM2_23680 2708875 - 2708345 - | hypothetical protein TERM 3065 2708885 - 2708895 + r 70 -5.4 -4.42806 | TTTCATGATCAATCC CCAT CCC ATGG TTTATTTGCCGCTAC HRM2_23690 2710354 - 2708957 - | putative Ser/Thr phosphatase-family protein TERM 3066 2709953 - 2709935 - G 74 -8.1 -3.99324 | overlap 2709937 TCCCAGTACGACAAA TACCGCC ATCAA GGCGGCA AGGGTTCCCAGGGAG TERM 3067 2710732 - 2710702 - g 76 -6 -4.67982 | opp_overlap 2710679 GGGCATGGAACAAAA TTCCCGGGGTGGAT CTT ACCCGCGCCGTGAA ACAACGCAAAAGCCG nfnB2 2710503 - 2711330 + | NfnB2 HRM2_23710 2711412 - 2711927 + | hypothetical protein HRM2_23720 2711928 - 2712827 + | hypothetical protein TERM 3068 2712857 - 2712891 + T 100 -19.4 -3.64703 | overlap 2712858 TTCAACTTTGATGAT CGGAGTCAGGCTTGCG TTG TGCAAGCCTGACTCCA TTTAACTAACGCACC TERM 3069 2712858 - 2712890 + T 100 -22.9 -2.78679 | overlap 2712857 TCAACTTTGATGATC GGAGTCAGGCTTGCG TTG TGCAAGCCTGACTCC ATTTAACTAACGCAC lguL 2713265 - 2712897 - | LguL tpxA 2713780 - 2713280 - | TpxA HRM2_23750 2714492 - 2714004 - | hypothetical protein TERM 3070 2714254 - 2714232 - G 72 -8.4 -3.86252 | opp_overlap 2714230 2714232 GGCGATCAAATAGAA GCAGGCAGCT GAA AGGTACCTGC TGTTGATTTCCCTGT TERM 3071 2715080 - 2715052 - g 72 -3.9 -4.90296 | opp_overlap 2715052, overlap 2715042 2715054 AAAAGGCCAGAAAAA TCCTGGAGG GGTATGGCTAT CCTCCAGAA TCCATTGAAACAAAG uspA13 2714796 - 2715689 + | UspA13 TERM 3072 2716719 - 2716708 - g 88 -3.6 -5.60993 | overlap 2716710 GCTGTCATAAAAAAA GGCC CGTT GACC CACAGGATTGTTAGC TERM 3073 2716857 - 2716869 + G 75 -9.1 -3.93061 | overlap 2716852 AATCATTGCCGGGGG CCCCA TGA TGGGG TTTGCCTTTTCAGAT rnfC1 2715820 - 2717187 + | RnfC1 TERM 3074 2717944 - 2717968 + G 74 -4.2 -4.88405 | overlap 2717945 AACGGACACCTGCTC CTTCACCACC TCTTT GGTGGTGCAC TTTTGTTTGGCGCTT TERM 3075 2718016 - 2718033 + G 79 -5.5 -4.91852 | opp_overlap 2718020 CCGGTCTCTTCTCCA CTAACCC CCAG GGGTAAG TTTATTTTTGGTGCA rnfD1 2717200 - 2718186 + | RnfD1 TERM 3076 2718560 - 2718578 + G 80 -3 -5.29445 | opp_overlap 2718573 GGCATGGACGGGAAT GCCCAG AAAGTCA CCGGGC TTTTTATTCTTGACC rnfG1 2718188 - 2718841 + | RnfG1 TERM 3077 2718959 - 2718976 + G 86 -11.3 -4.07562 | opp_overlap 2718959 2718958 2718972, overlap 2718968 2718972 CCAATGGAATGAAAC CGGCCAT CACA ATGGCCG TTTCTGTGGCCTTTG TERM 3078 2718976 - 2718959 - g 73 -11.3 -2.97109 | opp_overlap 2718959 2718968 2718972, overlap 2718958 2718972 CCAATGGAATGAAAC CGGCCAT CACA ATGGCCG TTTCTGTGGCCTTTG rnfE1 2718841 - 2719458 + | RnfE1 rnfA1 2719455 - 2720234 + | RnfA1 TERM 3079 2720632 - 2720647 + G 73 -9 -3.66999 | CACCCTTGTGGCAGG GGTGCA GGGA TGCACC TTTGGCTGCCTCGGT rnfB 2720231 - 2721052 + | RnfB TERM 3080 2721139 - 2721151 + F 78 -5.5 -4.93177 | AAGGGACTCAGGCTT GCGTT GTT GACGC TTTTGTTGATTTTTG HRM2_23830 2721835 - 2722110 + | putative Acetyl-CoA hydrolase/transferase HRM2_23840 2722300 - 2722698 + | hypothetical protein dnaG7 2722999 - 2723370 + | DnaG7 TERM 3081 2723584 - 2723601 + G 74 -9.9 -3.61715 | opp_overlap 2723583 2723582 AGGTTATCAACAATC TGTCTCC AATT GGAGACA TTCTTCCCAACAATG HRM2_23860 2723370 - 2723951 + | hypothetical protein TERM 3082 2724094 - 2724080 - gf 86 -5.6 -5.28683 | opp_overlap 2724093 ATCAATATCAAAAAA CCGGCA TTA TTCCGG GGCCACTCCTACTTG TERM 3083 2725372 - 2725356 - gf 91 -5.1 -5.40474 | ATTGCCGGAAAAAAA TGAACTG GAC CAGATCA TCGACTTTTTGGAGC HRM2_23870 2723938 - 2725626 + | putative transposase/integrase HRM2_23880 2725550 - 2726296 + | putative ATP/GTPase TERM 3084 2726422 - 2726453 + F 100 -11.1 -5.27938 | gap 1, opp_overlap 2726419 2726424 2726426 ATAATTAAATCAGGA TAGACCATTACGCT TTTTT AGCG-AATGGTCTA TTTTTGTTTACAACT TERM 3085 2726451 - 2726424 - f 71 -9.3 -2.90456 | gap 1, opp_overlap 2726422, overlap 2726419 2726426 AATTAAATCAGGATA GACCATTACGCT TTTTT AGCG-AATGGTC TATTTTTGTTTACAA cat2 2726798 - 2727799 + | Cat2 TERM 3086 2727838 - 2727869 + T 100 -5.8 -6.0427 | opp_overlap 2727838 GGCTTTAGCACAAAA GATCGGCTGCAAAA AATT TTCCACAGCCGATC TTTTTTTTATCTGCT TERM 3087 2727869 - 2727838 - T 100 -12.4 -4.46212 | opp_overlap 2727838 GGCTTTAGCACAAAA GATCGGCTGCAAAA AATT TTCCACAGCCGATC TTTTTTTTATCTGCT HRM2_23900 2728344 - 2727913 - | ACT domain protein TERM 3088 2728387 - 2728408 + r 75 -5.1 -4.78149 | gap 1, overlap 2728389 2728391 TGAAAATATTAACTG TTTG-CCGGC CAT GCCGGTCATA TTTTTCGGTTGTCAA TERM 3089 2728389 - 2728406 + r 74 -7.7 -4.00465 | gap 1, overlap 2728387 2728391 AAAATATTAACTGTT TG-CCGGC CAT GCCGGTCA TATTTTTCGGTTGTC TERM 3090 2728391 - 2728403 + r 76 -10.5 -3.03505 | overlap 2728389 2728387 AATATTAACTGTTTG CCGGC CAT GCCGG TCATATTTTTCGGTT paaK2 2729708 - 2728404 - | PaaK2 TERM 3091 2729783 - 2729758 - R 100 -11.9 -6.12458 | gap 1 TAAAAAAATAAAAAA GGGCACAAGGGT TTC ACCCCTG-GCCC TTAAAATTATAAAAC crtA2 2730804 - 2730028 - | CrtA2 amiC 2732540 - 2730834 - | AmiC TERM 3092 2731497 - 2731462 - G 75 -10.3 -3.49102 | opp_overlap 2731462, overlap 2731463 ACATCCTTGAGATAA CCCGGGGCACCGGGG TCCTTG CCCCCATGGCCCGGA TCAATAACAATTTTC TERM 3093 2731496 - 2731463 - G 70 -11.6 -2.6914 | opp_overlap 2731462, overlap 2731462 CATCCTTGAGATAAC CCGGGGCACCGGGG TCCTTG CCCCCATGGCCCGG ATCAATAACAATTTT TERM 3094 2731581 - 2731620 + g 70 -9.2 -3.53444 | gap 1 TGTCACAAGGGGAGT GGCGGTTTG-GGCGACAGG AGT CCTGTCGCTGCTGGCAGCC TTTGACCACACATCA mutS 2735232 - 2732545 - | MutS TERM 3095 2733014 - 2733003 - G 73 -5.8 -4.57341 | AATGGGTGGCAAAAA GGGT TTTG ACCC CCTTGCCGTCAAGAT TERM 3096 2733381 - 2733413 + g 73 -2.8 -5.00616 | gap 2 TGTTGTCAAGCCGGA TGG-AGTTGG-GAATG TAT CGTTCACCAACCACCA TTTTTTCAACCACAG TERM 3097 2734326 - 2734344 + g 78 -2.3 -5.24531 | overlap 2734335 TTATGGTGCAGTCAA GGACGCT GATCA GGCTTCC TTTTTTGTCGGAGGT HRM2_23950 2735670 - 2735251 - | hypothetical protein HRM2_23960 2736331 - 2735771 - | hypothetical protein TERM 3098 2735973 - 2735983 + g 71 -6.8 -4.18494 | opp_overlap 2735972 TTCCCAGGAGAAATT GTGC CAG GCAC TTTTAGATGGGAGTA TERM 3099 2736181 - 2736211 + g 71 -5.4 -4.51097 | gap 1 CCAGGCCTTCGTGGG TGGCGTGGCGGGT ACCAAA ATCCGCC-CACCA TTTTCTCCTGCTTAA HRM2_23970 2736529 - 2736338 - | hypothetical protein TERM 3100 2736548 - 2736562 + r 72 -7.1 -3.91897 | CTTCTCCTTTTTTTA CCGGT TTTTT ACCGG TTTATAAATGAACCA HRM2_23980 2737208 - 2736564 - | putative metallophosphoesterase (calcineurin superfamily) HRM2_23990 2737952 - 2737221 - | hypothetical protein HRM2_24000 2739115 - 2737949 - | Dgt HRM2_24010 2739990 - 2739127 - | ParA family protein TERM 3101 2739940 - 2739957 + g 74 -2.5 -5.11033 | overlap 2739936 TTTTTGTTTTTGCTG GGAAGGG CATC CCCCGCC TTTTTTGGCCTTGTC HRM2_24020 2740774 - 2740049 - | hypothetical protein TERM 3102 2740332 - 2740318 - G 70 -2.8 -4.77165 | opp_overlap 2740318 2740319, overlap 2740319 TTCGTGACAATAAAA GCTTTG CTG CAAAGG GTTTTATGGTGGTTG TERM 3103 2740410 - 2740396 - G 90 -10 -4.52589 | GTTTTCCAGATAAAA GGGAGA TGA TCTCCC GGATGTGAATCGGCA TERM 3104 2740811 - 2740801 - R 90 -4 -5.68023 | GGAGAACGAAAAAAA TAGA CTG TCTA TCTCGGCCCATTCAA HRM2_24030 2742674 - 2740809 - | TPR repeat protein TERM 3105 2741637 - 2741621 - GR 71 -5.1 -4.57569 | opp_overlap 2741620 2741624 GCATCCCTGTAAAAA CAATGGC TGC GTCATTG AATCTTTTGTTTCCC rpoH 2743599 - 2742631 - | RpoH TERM 3106 2742804 - 2742792 - GR 73 -2.7 -5.00616 | GTTCGTCTGAAAAAA TTCTC TTG GAAAA GATCTCCATCTCCCG TERM 3107 2743271 - 2743294 + gr 71 -9 -3.35996 | gap 1, opp_overlap 2743284 ACAAGGCCGATATTG CCTTCCTGGAT AAG ATCCAG-AAGG TTCTGCATCCAGATG TERM 3108 2743838 - 2743862 + r 100 -7.2 -6.02919 | gap 1, opp_overlap 2743833 CCATTTAGAACAAGG GCTCTCGGGAA AAAT TTCCTG-GAGC TTTTTTTGTTTGTCC pspA1 2744770 - 2744063 - | PspA1 HRM2_24070 2746713 - 2745394 - | hypothetical protein tag 2748220 - 2747636 - | Tag HRM2_24090 2748646 - 2748428 - | hypothetical protein TERM 3109 2748968 - 2748982 + H 84 -6.4 -5.00616 | opp_overlap 2748968 2748969, overlap 2748969 GAAAATTAAAAGAGA TCATCC AGG GGATGG TTTTTTGAAACCCGA TERM 3110 2748969 - 2748981 + H 70 -7.7 -3.60048 | opp_overlap 2748968 2748969, overlap 2748968 AAAATTAAAAGAGAT CATCC AGG GGATG GTTTTTTGAAACCCG TERM 3111 2749630 - 2749646 + G 76 -6.5 -4.56597 | overlap 2749628 TTCAGTTTCCCCTGA CCCATGA GGA TCTTGGG TTTTTAACCGGCGCC crp 2749059 - 2749763 + | Crp TERM 3112 2749884 - 2749863 - f 85 -2.3 -5.83226 | gap 1, overlap 2749881 AATCGAATAAAAAAA GGAGTATACA CTA TGCA-ACCCC AAATTTTAGGAATTT isf 2749875 - 2750528 + | Isf TERM 3113 2750983 - 2750966 - g 91 -5.5 -5.40072 | opp_overlap 2750968, overlap 2750969 2750979 TTTCCTGTAAAAAAA GAGCAGG AAAA CCTGATC GTATCGATTAACTGA HRM2_24120 2750576 - 2750998 + | iron-sulfur cluster-binding protein (Rieskeprotein, 2Fe-2S protein) TERM 3114 2751088 - 2751109 + T 74 -8.1 -4.07568 | gap 1, opp_overlap 2751094, overlap 2751081 2751078 GTATCCAGTGTCTCC GACAATCGCC GAA GGC-ATTGTC TTTTCACGACAGAAA HRM2_24130 2751721 - 2751152 - | HTH-type transcriptional regulator (TetR-family protein) HRM2_24140 2751947 - 2752615 + | hypothetical protein TERM 3115 2752765 - 2752781 + F 71 -3 -5.04249 | TGGCAACTACCTCAA GTTCGA AACAA TTGAAC TTTATTTTTTAGGAG cspA 2752805 - 2753005 + | CspA TERM 3116 2753074 - 2753099 + F 93 -2.4 -6.09888 | AATAGATTCGTAAAA GCCCCTTTGG TTAATT TCATCGGGGC TTTTTTTTGTTCACC TERM 3117 2753453 - 2753442 - g 100 -4.4 -5.93252 | TGGAAAAACAAAAAA GACT GAAA AGTC AAATCAATGATCTAT TERM 3118 2755088 - 2755066 - g 78 -12.6 -3.00525 | opp_overlap 2755064 2755067, overlap 2755061 TGCCGGCAAAGCACA TCCGGCCGAC GAG GCCGGCCGGT CATTAATACAGCAGT TERM 3119 2755067 - 2755087 + G 79 -13.9 -2.77899 | opp_overlap 2755066 2755061, overlap 2755064 GCCGGCAAAGCACAT CCGGCCGAC GAG GCCGGCCGG TCATTAATACAGCAG TERM 3120 2755806 - 2755794 - g 75 -9.1 -3.92869 | GCATTGATGGAGAAA TGCCG GTA CGGCA GAAGATGAAACTTAT glgP3 2753426 - 2755972 + | GlgP3 TERM 3121 2756262 - 2756274 + G 73 -2.7 -4.93898 | overlap 2756263 TTAGTATTATTTTTA TTGAT ATT ATCAG TTTTTATCGTGATCT TERM 3122 2758989 - 2758969 - g 88 -3.9 -5.63517 | overlap 2758971 GGTTCAAACAAAAAA CACTGAAGA AAT TCCCCAGGG TAGCGGTGAAACAAT TERM 3123 2758987 - 2758971 - g 71 -5.1 -4.45696 | overlap 2758969 TTCAAACAAAAAACA CTGAAGA AAT TCCCCAG GGTAGCGGTGAAACA HRM2_24170 2756177 - 2759374 + | two-component protein, sensory box histidine kinase/response regulatory protein HRM2_24180 2759872 - 2759573 - | putative Na+/H+ antiporter and related arsenite permease HRM2_24190 2760211 - 2759921 - | hypothetical protein gltT 2761787 - 2760552 - | GltT TERM 3124 2761021 - 2761006 - G 71 -6 -4.35926 | overlap 2761007 ATGGTAAAGGGAAAA GCTGCG GCTG CGCTGC AGGTACTCAGCCCGA TERM 3125 2762292 - 2762277 - g 73 -9 -3.70722 | overlap 2762270 GCCACCAATACAGAA CCCGTA GGAT TACGGG GCATTGCCGAAAAAG luxR1 2762091 - 2763251 + | LuxR1 HRM2_24220 2763882 - 2763223 - | TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein HRM2_24230 2766275 - 2763879 - | two-component protein, sensory box histidine kinase/response regulatory protein TERM 3126 2766775 - 2766751 - g 91 -9.2 -4.81249 | opp_overlap 2766767 GCCGAAAGGTAAAAA CCGGGCAGGA TTTTT CCCTGGCCGG CCGTTCCTTGACCGC TERM 3127 2767010 - 2767024 + G 91 -4.2 -5.64006 | overlap 2767012 TTTTGGTGAACGGTT CCGGTA TTA TACCAG TTTTTTTAATTCCCT TERM 3128 2767535 - 2767556 + G 100 -11.5 -5.07486 | TCCGCAGTTGGAAGG CGGCAGTGC CCAG GCCCTGCCG TTTTTCTTCAAACTG TERM 3129 2767749 - 2767774 + G 76 -6.1 -4.66537 | overlap 2767750 2767751 2767771 GCCAGGTTTTGTGCG TTGGCAGTACT GATC AGTTCTGCCGG TTTTGTATTCACCGG putP 2766582 - 2767958 + | PutP HRM2_24250 2768261 - 2770177 + | putative flagellin HRM2_24260 2772291 - 2770339 - | alpha amylase family protein pfkB2 2773198 - 2772317 - | PfkB2 TERM 3130 2772625 - 2772637 + g 72 -4.1 -4.82901 | GCAGTTCTGCCATCT GGGAT TCG ATCTC TTTTTCTGCCCCGAC TERM 3131 2773124 - 2773112 - G 80 -10.5 -3.6715 | opp_overlap 2773110 CCAGGCAACGTTAAA CGGCG CCC CGCCG AGAATTTCTTCTCCG HRM2_24280 2774181 - 2773195 - | hydrolase of HAD-superfamily spsA 2776201 - 2774030 - | SpsA TERM 3132 2774886 - 2774909 + gr 70 -3.2 -4.86731 | gap 1, overlap 2774886 2774888 ACAGCAAGGTATTGC TT-TGCATGGG CAT CCCATGAATAA TTTTCTTTAACACCC TERM 3133 2775167 - 2775154 - GR 74 -4.5 -4.87665 | overlap 2775155 2775156 CCGGATTGACAAAAA CGCCA CCCG TGGCA GCCGCAATCCGGTAA TERM 3134 2775250 - 2775238 - GR 72 -7.7 -3.86346 | TCACTTTTCCATAAA GATCG TAA CGATC AATTGCTACCAATAA TERM 3135 2775902 - 2775888 - GR 73 -2.8 -5.00616 | overlap 2775890 TTGTCTGTGAAAAAA TCGAGA TGA TCCCAA AGTTCTTCCTTGGCA TERM 3136 2776357 - 2776310 - R 70 -7.9 -3.57619 | gap 3 AAACCTGAAATAAGA CCCCAATCGGACACAGGCAGATCA TGT TG-TCT-C-TGTGCCCGGCTGGGG GATGCTCAATTGGGT TERM 3137 2776611 - 2776599 - R 80 -10.5 -3.48276 | GTGTGTTTCATATAA CCGGC ACG GCCGG AACGAGGTATGGCTC TERM 3138 2776999 - 2776987 - R 86 -10.5 -3.85698 | TGCGTTTCTTATAAA CCGGC ATG GCCGG AGCGAGGTATCTTCA HRM2_24300 2777650 - 2777096 - | putative transmembrane protein (transporter-like) HRM2_24310 2778227 - 2777661 - | putative transmembrane protein (YeeE/YedE family protein) HRM2_24320 2778550 - 2778233 - | transcriptional regulator (ArsR-family protein) TERM 3139 2778401 - 2778439 + g 70 -8.1 -3.74693 | gap 1, opp_overlap 2778401 GGCAGACTGACTTAA GGGGATGGCCTGGTTCAG TACA CTGA-CCGGGCACTCTCC TTTCATCAGATGACA HRM2_24330 2779176 - 2778859 - | putative short-chain dehydrogenase (SDR-family protein) HRM2_24340 2779411 - 2779163 - | putative dehydrogenase HRM2_24350 2779679 - 2779873 + | transcriptional regulator (MarR-family protein) HRM2_24360 2779830 - 2780393 + | hypothetical protein HRM2_24370 2780386 - 2780709 + | hypothetical protein HRM2_24380 2783549 - 2780820 - | selenocysteine-containing oxidoreductase fusion protein (N:MarR-regulator domain-C:molybdopterin oxidoreductase) (selenocysteine protein) TERM 3140 2783723 - 2783733 + H 79 -3.2 -5.29445 | GAATCTTTTCGACAG TGGC GCG GCTA TTTTTGTTATTACCA HRM2_24390 2783760 - 2783948 + | hypothetical protein HRM2_24400 2785390 - 2783963 - | alkaline serine protease, subtilase family protein TERM 3141 2784070 - 2784051 - G 100 -9.3 -5.24129 | TTCTGGGACAAAAAA GCGGCAA TCTGGT TTGCCGC AAATGCAGCAGAAAT TERM 3142 2784634 - 2784612 - G 70 -11.2 -2.57003 | overlap 2784611 2784609 CTAGCAAGAAGATAC TCGCCGGGCA GAT TGCCCGACGC CAGGCCTGAATCAAG HRM2_24410 2786447 - 2785614 - | hypothetical protein HRM2_24420 2787235 - 2786900 - | hypothetical protein HRM2_24430 2788371 - 2787325 - | ABC-type transport system involved in resitance to organic solvents, periplasmic substrate-binding protein HRM2_24440 2789096 - 2788371 - | ABC-type transport system involved in resitance to organic solvents, ATP-binding protein TERM 3143 2788503 - 2788484 - G 95 -11.4 -4.5442 | overlap 2788485 CCGTCAACCATAAAA CCGCAGCC CCCT GGCTGCGA ACCACCCGAAGGACA TERM 3144 2788502 - 2788485 - G 81 -12.7 -3.3217 | overlap 2788484 CGTCAACCATAAAAC CGCAGCC CCCT GGCTGCG AACCACCCGAAGGAC TERM 3145 2788635 - 2788619 - G 73 -12.3 -2.64354 | overlap 2788618 GGACACAGGCACAAC GGGCAAG ATC CTTGCCC CTGAACGTGGACGGC HRM2_24450 2789955 - 2789119 - | ABC-type transport system involved in resitance to organic solvents, permease protein TERM 3146 2789359 - 2789346 - G 80 -2.3 -5.47218 | overlap 2789347 2789348 TCTGATCTAAAAAAA TCTGG GGCG CCAGC AGCCTGAGTCCCAGG HRM2_24460 2791088 - 2789952 - | two-component hybrid protein, sensory box hisitidine kinase/adenylate cyclase TERM 3147 2790221 - 2790210 - G 76 -7.2 -4.31085 | opp_overlap 2790210 GATACGAAGGGAAAA GGGG CCAA CCCC TTCATCGTTAAGGTC HRM2_24470 2792290 - 2791190 - | hypothetical protein TERM 3148 2792856 - 2792833 - g 100 -3.8 -6.12328 | ATAACAGAAAAAAAA GAACGGTACC TTCG GGTAACCTTC ACCACAAACTTGATG TERM 3149 2792989 - 2792975 - g 83 -10 -4.19238 | GGGTCAACCGGAAAA GGATGG AAA CCATCC GATCAAGGTTTGAAC HRM2_24480 2792581 - 2793030 + | hypothetical protein TERM 3150 2793419 - 2793397 - g 70 -4.7 -4.74103 | opp_overlap 2793409, overlap 2793401 CTGGTAACGGAAAAA CCATCCCTG CATGC CAGGGCAGG GCGCCTGGGTCTCTC HRM2_24490 2793040 - 2794407 + | putative GCN5-related N-acetyltransferase HRM2_24500 2795069 - 2794521 - | hypothetical protein TERM 3151 2796504 - 2796484 - g 73 -5.3 -4.59773 | overlap 2796485 2796486 CTCTACTTTGAAAAA TTTGACGGC ATG GCCGTCACC ACTGAAGATTTTGTT TERM 3152 2796502 - 2796486 - g 73 -12.3 -2.61004 | overlap 2796485 2796484 CTACTTTGAAAAATT TGACGGC ATG GCCGTCA CCACTGAAGATTTTG TERM 3153 2797016 - 2796996 - g 84 -2.4 -5.63857 | opp_overlap 2797008, overlap 2797000 AAAAACGCAAAAAAA GGAACCCC TTGGT GGGGTGTC ACCCCATGTGCTTGC TERM 3154 2797494 - 2797468 - g 86 -5 -5.25805 | opp_overlap 2797471, overlap 2797471 AACAAATGGAAAAAA GATCCCCTGGTC ATT GACAAGTGGTTC TCGGTTCAAGCGGTT TERM 3155 2797704 - 2797730 + G 74 -8 -4.09685 | TGACCGATCAAATCC CCAGATATCAGC CCG GTTGGTATCGGG TTTTAACCACTGGAA pepN 2795242 - 2797866 + | PepN HRM2_24520 2798693 - 2798235 - | hypothetical protein TERM 3156 2798307 - 2798295 - G 90 -9.1 -4.62336 | opp_overlap 2798286 ATTTGACTGGAAAAA CCACC CCA GGTGG CTTGAACAGGTTTTA TERM 3157 2798530 - 2798518 - G 78 -4.1 -5.08601 | overlap 2798528 GCATTGTAACAAAAA CTGCA TAA TACAG CCTCCCGGCTGGCTG TERM 3158 2798532 - 2798552 + g 81 -6 -4.96501 | opp_overlap 2798528 2798531 ACTGCATAATACAGC CTCCCGGC TGGCT GCCTGGGG TTTGTTTTTGTCCAG HRM2_24530 2798703 - 2799326 + | two-component response regulator (response receiver domain/LuxR regulator domain) HRM2_24540 2799575 - 2799922 + | hypothetical protein HRM2_24550 2800707 - 2799946 - | hypothetical protein TERM 3159 2800467 - 2800452 - G 74 -2.4 -5.18357 | overlap 2800453 2800454 CAAGGTAGGAAAAAA GGCAGG CCAC CCCGGC AAGAAACACGGACAG TERM 3160 2800530 - 2800520 - G 100 -2.4 -6.17033 | AAAAAAAACAAAAAA CCCG ATT CCGG CATGGTCCAGACAAA ilvE 2800811 - 2801650 + | IlvE HRM2_24570 2803476 - 2801818 - | putative adenylate cyclase family protein HRM2_24580 2805083 - 2803581 - | putative drug resistance permease (EmrB/QacA-family protein) TERM 3161 2804547 - 2804537 - G 89 -2.4 -5.75945 | ACTCTTTAAAAAAAA GCGC AAT GCCC ACAAGGGAAAACATT TERM 3162 2804624 - 2804607 - G 85 -4.1 -5.52384 | overlap 2804620 2804623 GCGCCAGGAAAAAAA GGTGACT ATAA AACCACC CAGGGTGGGACCGAT TERM 3163 2804632 - 2804620 - G 86 -9.1 -4.47328 | overlap 2804607 2804623 AAGGTGACTATAAAA CCACC CAG GGTGG GACCGATGAGGCTTG TERM 3164 2804916 - 2804896 - G 70 -9.7 -3.24411 | overlap 2804894 2804892 AGCTTTCCAAACACA GGCAAAGAC ACG GCCCTTGCC AGAAAATAGGCTGAA acuB1 2805775 - 2805089 - | AcuB1 zupT 2806629 - 2805814 - | ZupT TERM 3165 2806033 - 2806000 - G 70 -4.5 -4.65458 | CATATAAACAACAAA CATGGCACCGATCAC CCCT GCAATGGGTTCCACG ACTCCCGAAGACTGC HRM2_24610 2806954 - 2806649 - | hypothetical protein TERM 3166 2807334 - 2807303 - g 90 -15.2 -3.28924 | CATTGCTGTGTACAA GGGATACATCGCCC TGGT GGGTGATGCATCCC ACGTCAGGACCGATG TERM 3167 2807425 - 2807439 + G 70 -4.2 -4.70107 | opp_overlap 2807425, overlap 2807427 ACATGCACGTTGAAA GTTCCA TGG TGGATC TTTGTTCTTTTGCTG TERM 3168 2808392 - 2808373 - g 70 -10 -3.31726 | opp_overlap 2808382, overlap 2808371 CGGTTCCAGACAATA CACCCCGA ACCG TCAGGGTG ATCGGTATGGTTCCC TERM 3169 2808798 - 2808780 - g 70 -10.2 -2.89564 | opp_overlap 2808789 GTTGCAGGTCATATA GCCCTTCC TTT GGCAGGGC TCATGGGCCTTGACA adeC 2807142 - 2809007 + | AdeC TERM 3170 2810087 - 2810076 - g 76 -7.2 -4.36127 | GTCAAGAATGTAAAA GCCC TTGT GGGC AAATTACGAGACCAG manC 2809050 - 2810471 + | ManC HRM2_24640 2810600 - 2811169 + | putative transcriptional regulator TERM 3171 2812263 - 2812229 - g 80 -2.9 -5.24129 | overlap 2812231 TCTGTCCAGAAAAAA CAGCATCATCCTT GACCTGTGG AAGGAGGATGCCA ACACAACAGCATATC HRM2_24650 2811180 - 2813396 + | GTPase family protein uspA2 2813438 - 2813881 + | UspA2 HRM2_24670 2814427 - 2813888 - | HDIG family protein dnaJ4 2814939 - 2814424 - | DnaJ4 dapB 2815771 - 2814911 - | DapB TERM 3172 2815361 - 2815349 - GR 75 -9.1 -3.64703 | GGTGGTGGATGCAAA GGCCA TCA TGGCC TGGAAACCCACAATC HRM2_24700 2817487 - 2815790 - | two-component fusion protein (glucose-1-phosphate adenylyltransferase/aminoglycoside phosphotransferase) TERM 3173 2815900 - 2815913 + g 78 -2.4 -5.28942 | CAAGGGGGATGTATT GAAG AAACCG CTTC TTTTTCTTTACCATG plsB 2820198 - 2817484 - | PlsB HRM2_24720 2820426 - 2820683 + | hypothetical protein TERM 3174 2820738 - 2820716 - T 100 -17.8 -4.64598 | opp_overlap 2820716 2820719 GAATTACCGGAAAAA GAACCAGCCC CCT GGGCTGGTTC TTTTCCAACACCGTA TERM 3175 2820716 - 2820738 + T 100 -17.8 -4.07885 | opp_overlap 2820716, overlap 2820719 GAATTACCGGAAAAA GAACCAGCCC CCT GGGCTGGTTC TTTTCCAACACCGTA TERM 3176 2820719 - 2820735 + T 100 -13.7 -4.17048 | opp_overlap 2820716, overlap 2820716 TTACCGGAAAAAGAA CCAGCCC CCT GGGCTGG TTCTTTTCCAACACC rnhA1 2821437 - 2820778 - | RnhA1 HRM2_24740 2822647 - 2821475 - | hypothetical protein TERM 3177 2821549 - 2821565 + g 76 -7.3 -4.28774 | AATCATCTGCAATGG CATGGAT ATC GTCCATG TTTTCGATTCGATCC TERM 3178 2822570 - 2822616 + g 70 -8.7 -3.55071 | gap 1, opp_overlap 2822553 2822614, overlap 2822561 CGGGTTGGCCAGAAG GCCTAT-TCGGCATCCCCTGGG CAGA TCAAGGGGGTGTCGGCAAAGGC TTTCAAGCCCTGTCA TERM 3179 2823026 - 2823014 - H 80 -10.5 -3.49475 | overlap 2823015 GCGAGTTTCATATAA CCGGC ATG GCCGG AGCGAGGTATGGCTC TERM 3180 2823052 - 2823015 - H 71 -9.7 -2.69471 | overlap 2823014 CGAGTTTCATATAAC CGGCATGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATTTTGAAACACCT TERM 3181 2823117 - 2823105 - H 100 -10.5 -4.96848 | TGTTTCATATAAAAA CCGGC ACG GCCGG AGCGAGGTATCTTCA TERM 3182 2823784 - 2823762 - g 85 -4.1 -5.52384 | gap 1, opp_overlap 2823764 2823772, overlap 2823764 2823766 GGTTTATCAAAAAAA TACC-CCAGG ACCT CCTGGTGGTG GTTGATGAGGCATAC TERM 3183 2823781 - 2823764 - g 74 -6.9 -4.40552 | opp_overlap 2823764 2823772, overlap 2823762 2823766 TTTATCAAAAAAATA CCCCAGG ACCT CCTGGTG GTGGTTGATGAGGCA hisC2 2823218 - 2824324 + | HisC2 cmk1 2824321 - 2825016 + | Cmk1 TERM 3184 2825160 - 2825133 - f 70 -2.6 -5.04601 | opp_overlap 2825132, overlap 2825137 GTTATAAAGGAAAAA TTATCCATGCCC TCTG GGGTAGGGGTAA AATATTGTCTATGGG TERM 3185 2826398 - 2826386 - g 82 -7.7 -4.68593 | opp_overlap 2826385 GTGATCAGCGAAAAA TACCC CGT GGGTA CTGTGATTGAAGGCA TERM 3186 2826688 - 2826701 + G 74 -4.5 -4.8543 | opp_overlap 2826669 2826688, overlap 2826666 2826660 TATTGTAACCAATAT CACCG ACTT TGGTG TTTTTGTCGAGCTTG rpsA2 2825189 - 2827006 + | RpsA2 TERM 3187 2827074 - 2827110 + TF 100 -15.9 -5.28942 | opp_overlap 2827066, overlap 2827070 AAAGTTAGAACCTGA GGGGTCGGTTTCAGAGT ATT GCTCTGAATCCGGCCTC TTTTTATTTGCAGTC TERM 3188 2827650 - 2827635 - gT 74 -2.4 -5.11613 | overlap 2827636 AGATCATGGAAAAAA TCGGGC TGAC ACCCGT GGTGATCAAAAGCGG TERM 3189 2827825 - 2827811 - gT 75 -5.6 -4.59773 | opp_overlap 2827810 2827811, overlap 2827813 GCGCAGGTGGAAAAA CTTGCC GAC GGCAGG ATTTACACCGGTGAA HRM2_24790 2828599 - 2827991 - | hypothetical protein sppA 2827151 - 2828053 + | SppA TERM 3190 2828371 - 2828352 - Gf 81 -10.8 -3.29511 | opp_overlap 2828345 2828370 TTCATGTTTCGATAA GCAAAGGT ACTC ACCTTTGC ATACTCGCTGATATG guaB 2828882 - 2830357 + | GuaB TERM 3191 2830500 - 2830464 - g 86 -14.6 -3.23899 | gap 1, opp_overlap 2830466, overlap 2830459 CTGCAAGGAATTCAA CATGGATACCGTGGCCA TCAC CGACCACGGTA-CCATG TTCGGCACGGCTCCC TERM 3192 2831821 - 2831811 - g 91 -6.8 -5.20154 | overlap 2831812 AGATAATGCAAAAAA CCTG GGC CAGG CCCTGAAGGATGTGC dnaE 2830354 - 2833908 + | DnaE TERM 3193 2833937 - 2833914 - T 83 -11.6 -3.06133 | CAACGCTTGACCCAA GGGCCCCGGC AAGA ACCGGGGCCA TCGCCATTGAAAAAC osmY 2834534 - 2833956 - | OsmY HRM2_24830 2834808 - 2834539 - | hypothetical protein TERM 3194 2834746 - 2834734 - G 73 -2.7 -5.00616 | TCTGCCTGTAAAAAA CATGA CTA TCATA AAACAGATCCCGGCA TERM 3195 2835415 - 2835391 - g 71 -7.1 -4.16305 | opp_overlap 2835391 AGCGATAAAGAAGAA TTCCTGCTTCT CTC AGCAGCAGGGA TATTCAACCTCTCAG TERM 3196 2835469 - 2835480 + G 72 -3.6 -4.77719 | TCCAGATACGTCAAG GCGG TTAA TCGC TTTTATTCGGTTTTA djlA 2834920 - 2835678 + | DjlA TERM 3197 2835984 - 2835968 - g 75 -9.3 -3.85698 | opp_overlap 2835974 2835975 2835977 GGCTGTCTCCACAAA GGACCCG GAC CGGGACC TGGTCATTGTTAAGA TERM 3198 2836068 - 2836058 - g 73 -5.4 -4.60487 | opp_overlap 2836065 CATGATGGTGAAAAA CAAG AAG CTTG TCCAGTCGGATGAGT TERM 3199 2837753 - 2837706 - g 71 -7 -4.19953 | opp_overlap 2837716, overlap 2837716 GATCCAATGGTAAAA CCGGATGAAACAGCCAAGCTGT TTAA AAAGCTTGGCTGCGTAATCAAG GAATTTTATCTGTTG TERM 3200 2837743 - 2837716 - g 85 -12.8 -3.79021 | opp_overlap 2837716, overlap 2837706 TAAAACCGGATGAAA CAGCCAAGCTGT TTAA AAAGCTTGGCTG CGTAATCAAGGAATT TERM 3201 2837910 - 2837872 - g 79 -12.5 -3.09015 | opp_overlap 2837873 CGGACAGTGATTTAA CTCTATCAGGGCCGGAT GTGAT ACCCGGCCCTGACAAAT AGTTGTAACTAGTGC estA 2835699 - 2837912 + | EstA HRM2_24860 2838758 - 2838069 - | hypothetical protein fusA2 2840873 - 2838789 - | FusA2 TERM 3202 2840156 - 2840167 + g 76 -4.4 -5.05606 | CCGCTTCTTTGATCA TCTC TTCG GAGA TTTCTTTTTCTTCAA TERM 3203 2840223 - 2840211 - G 77 -9.1 -4.09243 | GAGATCGTCGGAAAA TGCGG AAA CCGCA TCGATCATGATTTCT TERM 3204 2841101 - 2841063 - g 82 -3.7 -5.27477 | gap 1, overlap 2841065 2841067 ATGTCAAGCAAAAAA CATATCCCAGAC-CCGCC CTTT GGCGGAGCCTGGAAGGAG ATGGTCAAAAGCGGC TERM 3205 2841097 - 2841067 - g 85 -11.9 -3.71857 | gap 1, overlap 2841065 2841063 CAAGCAAAAAACATA TCCCAGAC-CCGCC CTTT GGCGGAGCCTGGAA GGAGATGGTCAAAAG gidB 2841039 - 2841725 + | GidB TERM 3206 2842336 - 2842326 - g 71 -6.8 -4.2704 | CTGACCATGAACAAA GCCT ATG AGGC CAGGATTGCCAAAGA TERM 3207 2843087 - 2843073 - g 73 -2.8 -5.00616 | TGGCGGTGTAAAAAA CCTG TGATATT CAGG GCCACCCCCCAGTGG TERM 3208 2843168 - 2843195 + G 74 -11.3 -3.10796 | opp_overlap 2843159, overlap 2843170 CGACAACGTCAACTG GATCCCGGCCT GGGGAA AGGCCAGGATC TATTCCATGATCGAA TERM 3209 2844014 - 2844029 + G 71 -6.8 -4.18494 | overlap 2843998 CCACAACTTCTGCGT GGTGGA TCTG TCCGCC TTTTACCTGGACATC ileS 2841852 - 2844662 + | IleS lspA 2844667 - 2845155 + | LspA TERM 3210 2845829 - 2845840 + G 76 -3 -5.14965 | GACCTTCAGGGGCGA TTTC AGGG GAAA TTTTTTCATGGACAT lgt 2845164 - 2845952 + | Lgt TERM 3211 2845984 - 2846001 + G 91 -11.3 -4.23213 | AAATTTCTTGCATCT GAACCCC TGCC GGGGTTC TTTCTTGCCTATGGC TERM 3212 2846291 - 2846278 - g 74 -2.4 -5.16237 | opp_overlap 2846278 2846286 AAGTTCATTAAAAAA CCTT TTTTGG AAGG TCATTTCCTTGTTGT TERM 3213 2847033 - 2847021 - g 70 -4.8 -4.63592 | opp_overlap 2847030 CCCTAACAAAAACAA CACC TATCC GGTG TACCATACCTTTTTG holA 2845939 - 2847201 + | HolA TERM 3214 2848516 - 2848490 - g 81 -13.8 -3.06183 | overlap 2848492 CTCAGGCTCATCGAA CAGGGTATCCTC AAG GAAGACACCCTG ATAACGGTTCTTGCC TERM 3215 2848514 - 2848492 - g 71 -10.6 -3.08996 | overlap 2848490 CAGGCTCATCGAACA GGGTATCCTC AAG GAAGACACCC TGATAACGGTTCTTG pyk 2847194 - 2848609 + | Pyk HRM2_24940 2848861 - 2848613 - | hypothetical protein lipA 2849874 - 2849008 - | LipA TERM 3216 2849732 - 2849748 + g 71 -6.5 -4.21194 | opp_overlap 2849732 TGGTTTGCGAAACAA TGCCAGA TAT TCGGGCA TTTTGCCTCCTGGCA lipB 2850644 - 2849883 - | LipB TERM 3217 2850556 - 2850568 + g 70 -10.5 -3.01712 | opp_overlap 2850551 2850550 CGGCGACAACCCTGA CCCCC CCG GGGGG TCTTAAAGACCGAAC TERM 3218 2850589 - 2850611 + g 74 -9.9 -3.53343 | gap 1, opp_overlap 2850583, overlap 2850602 AAGACCGAACCCATT GGACG-GCCA TTCG TGGCTCGTCC TTTGGCCGACCCATT gcvP2 2852116 - 2850629 - | GcvP2 TERM 3219 2851235 - 2851216 - G 77 -9.2 -4.08706 | TCTCCACCACAGAAA TGGGTCCG GACC CGGGCCCA CCACCCCCGTGGGGA gcvP1 2853447 - 2852116 - | GcvP1 TERM 3220 2852962 - 2852991 + g 86 -7.1 -4.91852 | GTGAAAGGGATGAAC CAGGCTTGAAACG GCCA CGGTTCGGGTCTG TTTATTTTTCCTGAG gcvH 2853862 - 2853464 - | GcvH TERM 3221 2853960 - 2853972 + r 89 -10.5 -4.06491 | ATACCATCTATCGCT CCGGC CGT GCCGG TTTATATAAAATTAC gcvT 2855224 - 2853974 - | GcvT TERM 3222 2854805 - 2854822 + g 87 -4.9 -5.47218 | overlap 2854806 CTTGCCCGTGAGGTC TTTGATG ACCA CATCAAG TTTTTTTCCATGCCC TERM 3223 2856215 - 2856196 - g 74 -4.2 -4.90302 | GATGAAGAAAAGAAA GATCAAGG TAAT CCTGGACC GGAGCGTCACCACCT TERM 3224 2856265 - 2856277 + G 77 -9.1 -4.09685 | overlap 2856262 CGTCAGTGTCATGGT GGGTG CCT CACCC TTTTCAAACCTGAAA lpdA 2855510 - 2856943 + | LpdA HRM2_25020 2857534 - 2857091 - | HTH-type transcriptional regulator TERM 3225 2857546 - 2857582 + r 100 -13.7 -3.10017 | TCATTTCACTCTCAA GGGTTCACGGCTACC CCAGCAA GGCTGCCGTGAACCC TGTCTATTCCGGATT livF4 2858316 - 2857603 - | LivF4 livG4 2859089 - 2858316 - | LivG4 livM4 2860399 - 2859089 - | LivM4 livH4 2861342 - 2860428 - | LivH4 TERM 3226 2861508 - 2861479 - R 89 -3.5 -5.71712 | opp_overlap 2861487, overlap 2861481 2861487 TTCTATATAAAAAAA CGTAAAAACTGCC GCCG GGCCGTTTTTTGG GCCGGGCGGCAGCAG TERM 3227 2861487 - 2861500 + r 73 -3.7 -5.00616 | opp_overlap 2861481 2861479 2861487 AAAAAAACGTAAAAA CTGCC GCCG GGCCG TTTTTTGGGCCGGGC TERM 3228 2861520 - 2861487 - R 100 -16.7 -4.97888 | opp_overlap 2861487, overlap 2861481 2861479 AAAAAAACGTAAAAA CTGCCGCCGGGCC GTTTTTTG GGCCGGGCGGCAG CAGAATGTTCCTACT livK1 2862857 - 2861685 - | LivK1 TERM 3229 2863381 - 2863366 - g 70 -4.7 -4.64676 | CCATCCTCAATAAAA TCGGT GCTTCA ACCGA CAATCTCATGACCTT clpB 2863209 - 2865788 + | ClpB HRM2_25090 2866832 - 2865783 - | sigma-54 dependent two component DNA-binding response regulator (Fis family protein) TERM 3230 2865929 - 2865939 + g 84 -4.6 -5.28166 | CTTCCTTTTCAACCC GGTC CAC GGCC TTTTTCTTGATTTTC TERM 3231 2866474 - 2866458 - G 74 -6.6 -4.4009 | TCCCAGGGGAGAAAA TTCTCC GCTCT GGAGAA CATGGAGAATTTTGG HRM2_25100 2867230 - 2866829 - | response regulator family protein TERM 3232 2867177 - 2867165 - G 87 -4.9 -5.41143 | CAGGGCCGAAAAAAA TTCAT TGA ATGAA AGAAGAATATCCTCG kncA 2868248 - 2867316 - | KncA fabH2 2868536 - 2869549 + | FabH2 glmU 2869506 - 2870759 + | GlmU glmM 2870784 - 2872175 + | GlmM HRM2_25150 2872188 - 2872583 + | hypothetical protein sat1 2872705 - 2874399 + | Sat1 HRM2_25170 2874532 - 2874834 + | putative transcriptional regulator TERM 3233 2875445 - 2875431 - g 74 -8.6 -4.00589 | overlap 2875426 CCAAAAGATACCAAA GACTCT GGA AGAGTC GAAATGGCCTATTCC HRM2_25180 2874831 - 2876090 + | putative capsule biosynthesis protein HipA TERM 3234 2876719 - 2876735 + G 70 -2.9 -4.76041 | overlap 2876710 2876717 CGCAGGGTTGTTTCA GCTTGTT TCC AGCGGGC TTTTTGATAAATATG HRM2_25190 2876162 - 2877058 + | hypothetical protein TERM 3235 2877305 - 2877280 - g 73 -3.1 -4.9755 | opp_overlap 2877283, overlap 2877282 AGAGATAACCAAAAA CAGGGGCATTG CCAT CTGTGCCCCCA TTGCCGAGTGCGAGA cysC 2877257 - 2877502 + | CysC HRM2_25210 2877601 - 2877912 + | hypothetical protein HRM2_25220 2877909 - 2878430 + | putative acetyltransferase (GNAT-family protein) TERM 3236 2879347 - 2879336 - g 86 -5.8 -5.14163 | ACCCATGAAGAAAAA TGGC TATG GCCA ATACCTCTTAGACCT rfbA1 2878506 - 2879381 + | RfbA1 rfbC1 2879386 - 2879934 + | RfbC1 TERM 3237 2880609 - 2880642 + G 80 -10.5 -3.72576 | opp_overlap 2880609 2880619, overlap 2880597 2880609 ACCGCATATCCGAAA TTATCGGAAATACCA TTTT TGGTAATTTCGATAA TTTGATCGCCCAGGG HRM2_25250 2880029 - 2881468 + | hypothetical protein rfbA2 2881972 - 2882499 + | RfbA2 TERM 3238 2882632 - 2882617 - g 73 -3.2 -4.94058 | opp_overlap 2882617 CGAATTTAAACAAAA GGTGGT CCAT ACAACC TTTGTCCAGGATAAC TERM 3239 2882838 - 2882856 + G 74 -2.2 -5.10064 | opp_overlap 2882828, overlap 2882830 2882828 AGATGCTCTGGGTTC CCCCGGGT TTT GCCCACGG TTTTTATGTGTTAAG rfbC2 2882504 - 2883052 + | RfbC2 HRM2_25280 2883232 - 2884365 + | putative glycosyl transferase RfaG TERM 3240 2885266 - 2885248 - g 86 -6 -5.12707 | overlap 2885265 GGAAAGTTCAAAAAA TGTTGGGA TTT TCACAACA GCAGCGCGTATTGCA TERM 3241 2885287 - 2885265 - g 76 -11.3 -3.31144 | overlap 2885248 TTGGGATTTTCACAA CAGCAGCGC GTATT GCACTGCTG ACAAGTTTCCTACTA HRM2_25290 2884439 - 2885770 + | lipopolysaccharide biosynthesis protein TERM 3242 2886461 - 2886448 - g 79 -5.3 -5.04249 | overlap 2886418 TTTTCAAAAAAGAAA TTCTC TGGC GAGAA ACCCAGAAAGGCAAA HRM2_25300 2885838 - 2887022 + | predicted F420 dehydrogenase, beta subunit TERM 3243 2887286 - 2887276 - g 91 -6.8 -5.06414 | opp_overlap 2887276, overlap 2887261 GCCTTGTAATAAAAA GGCA GGT TGCC TTTGTCACAGGAGTC HRM2_25310 2887026 - 2888141 + | hypothetical protein HRM2_25320 2888399 - 2888563 + | putative acetyltransferase (hexapeptide repeat family protein) TERM 3244 2889145 - 2889161 + G 93 -3.7 -5.75538 | overlap 2889146 AAAGGTATCTGGACC TTTTTCC TAA GGAAAAC TTTTTGTTTTTTACA TERM 3245 2889146 - 2889160 + G 71 -7.2 -4.02882 | overlap 2889145 AAGGTATCTGGACCT TTTTCC TAA GGAAAA CTTTTTGTTTTTTAC TERM 3246 2889285 - 2889261 - g 86 -9.3 -4.58663 | ATGACCCTTCAAAAA CGAATGCATAG CAA CCAGGCATTCG ATTACAAAATACCTT TERM 3247 2889302 - 2889323 + G 74 -7.3 -4.12405 | TTACAAAATACCTTT CCTCCAGAT ATTA ATCTGGAAG TTTCCTTATCTTTAT TERM 3248 2889381 - 2889352 - g 74 -7.4 -4.25283 | opp_overlap 2889352 2889369, overlap 2889369 ATTTTTCCATTAAAA GAATTTTTCCTA AAAATG TAAGAAAAATTC TTGCTCTACTTTTCA HRM2_25330 2888670 - 2889566 + | putative 3-beta-hydroxysteroid sulfotransferase (Phenol sulfotransferase) TERM 3249 2890046 - 2890029 - g 83 -2.7 -5.42514 | GCACAAATCAAAAAA GTTGGAA TTGA TTTCAAC TGCTACTAAGGAGAA cysE2 2889618 - 2890055 + | CysE2 TERM 3250 2892608 - 2892644 + G 73 -10.5 -3.28791 | opp_overlap 2892618 2892635 2892637 TTTTTATGTTTTTAT TTCTTCAATATTTTTAT CAA AAAAGAATATTGAAGAA TTCTCCAACAACCAT HRM2_25350 2891602 - 2892807 + | hypothetical protein HRM2_25360 2893234 - 2894067 + | putative lipopolysaccharide N-acetyl-glycoaminyltransferase HRM2_25370 2894082 - 2895080 + | Fe-S oxidoreductase (radical SAM family protein) HRM2_25380 2895084 - 2896184 + | putative capsular polysaccharide bisynthesis glycosyl transferase HRM2_25390 2897108 - 2898532 + | archae-like transposase HRM2_25400 2898740 - 2900029 + | transposase (IS4 family protein) TERM 3251 2900548 - 2900531 - g 70 -3.3 -4.86731 | TCGGTTTAAACAAAA CACCAGC TATA GGTGGCG GGCATTTATGAACGG TERM 3252 2900835 - 2900824 - g 70 -2.2 -5.03747 | overlap 2900812 AAACTCCGGAAAAAA TCGG AGAT CCAA GAAGTAGTAGTGGTC HRM2_25410 2900241 - 2901692 + | putative transposase TERM 3253 2901781 - 2901770 - g 74 -4.4 -4.78326 | opp_overlap 2901770 TTCCAAACAAATAAA GACA GAGG TGTC TTTCAAGAAATATTC HRM2_25420 2901743 - 2902423 + | transposase (IS801 family protein) TERM 3254 2902666 - 2902677 + G 72 -3.6 -4.82901 | overlap 2902676 TTAGATATTTAAAAA CCGG AAAG CTGG TTTTTATCGGAAAGC HRM2_25430 2902623 - 2903498 + | putative lipopolysaccharide N-acetyl-glycoaminyltransferase HRM2_25440 2905569 - 2903929 - | archae-like transposase TERM 3255 2904752 - 2904726 - G 78 -2.2 -5.252 | opp_overlap 2904732, overlap 2904732 CAGCTTCAGAAAAAA CTACAATCCAGC GTT GCTGGATCTCAT AATGCTCTATTTCAA TERM 3256 2904746 - 2904732 - G 78 -10 -3.83985 | opp_overlap 2904732, overlap 2904726 CAGAAAAAACTACAA TCCAGC GTT GCTGGA TCTCATAATGCTCTA TERM 3257 2905601 - 2905628 + H 100 -8.6 -5.28481 | CATCTTTCTTTGTGG TGATTTAAGTTG GAGG CATCTTAAATCA TTTTTTAATTAAATG HRM2_25450 2905654 - 2906700 + | hypothetical protein TERM 3258 2907860 - 2907842 - g 73 -11.7 -2.58275 | opp_overlap 2907849 2907852, overlap 2907841 2907839 AAGATTAAAAAGGAT CCCAGGG TGATT CCCTGGG TGGGAACATTTTTGA rfbP 2906735 - 2908177 + | RfbP HRM2_25470 2908597 - 2908256 - | hypothetical protein HRM2_25480 2908853 - 2909923 + | hypothetical protein TERM 3259 2910201 - 2910220 + G 73 -5.6 -4.72272 | opp_overlap 2910201 CCAAAAATATAATAT CCGCTATG ATGC CGTTGCGG TTTTTAATAAACAAC HRM2_25490 2909920 - 2910828 + | hypothetical protein HRM2_25500 2910815 - 2911132 + | hypothetical protein TERM 3260 2911337 - 2911361 + GF 80 -10.2 -3.53811 | opp_overlap 2911336 GCTGGTTCACAGGAT CATAAAAGAG AATGG CTCTTTTATG TTTAAAGGCGATAAC HRM2_25510 2911104 - 2911643 + | putative signal sequence peptidase HRM2_25520 2911806 - 2912636 + | hypothetical protein TERM 3261 2912692 - 2912659 - f 81 -11.1 -3.24613 | opp_overlap 2912664, overlap 2912664 GATTAAGCAACTCAA TAAAAGACAGGACAG AAGA CTGGCCTGTCTTTTT ATTTTATGTATAAAC TERM 3262 2912664 - 2912687 + F 100 -11 -5.58522 | opp_overlap 2912664 2912659 AGCAACTCAATAAAA GACAGGACAG AAGA CTGGCCTGTC TTTTTATTTTATGTA TERM 3263 2912687 - 2912664 - f 100 -11 -4.72631 | opp_overlap 2912664, overlap 2912659 AGCAACTCAATAAAA GACAGGACAG AAGA CTGGCCTGTC TTTTTATTTTATGTA TERM 3264 2912992 - 2913005 + G 100 -3.7 -6.28401 | overlap 2912978 TGGCCTGCGGGGCAG GGCTG TTAA CCGCC TTTTTTTCTTTTTTA TERM 3265 2913692 - 2913713 + G 74 -4.4 -4.8667 | TCTTGAAAGTGGGGC CAGGATGT ATGAGG ACAACCTG TTTTTGTCCCATCTG TERM 3266 2914272 - 2914285 + G 70 -2.3 -5.00616 | overlap 2914254 2914253 CAATGGCAGGCAATG GCCAT TTCC AGGGC TTTTTTCAGGGACGC msbA2 2912715 - 2914559 + | MsbA2 HRM2_25540 2914667 - 2915251 + | hypothetical protein TERM 3267 2915270 - 2915293 + F 100 -14 -5.80364 | opp_overlap 2915268 2915267 AAGATATCAGAAGGG CCCTGCAATT ATAA AATTGCAGGG TTTTTTTGTTGACAT TERM 3268 2915759 - 2915787 + G 82 -6.7 -4.88163 | opp_overlap 2915740, overlap 2915761 AGACCACAAGGCGCA CCCAGGGGTAT CTGCTGT ATGCCCCTGAG TTTGTTTTCTATTCA HRM2_25550 2915389 - 2916702 + | hypothetical protein TERM 3269 2917221 - 2917204 - g 70 -11.3 -2.51133 | overlap 2917203 2917206 GAGCGACTCATCAAG GAGGGAG ATAC CTCCCTC AACCTCCCCATCCGT gumA 2916706 - 2917500 + | GumA TERM 3270 2917818 - 2917837 + G 76 -5 -4.88736 | ACCACTTTTTTCCCG GAAGATAC GTCT GAATCTTC TTTTTATAAATCGTC TERM 3271 2918341 - 2918325 - g 100 -5.1 -6.06529 | overlap 2918327 GAGACAGAAAAAAAA GAGATGG GGG CCATCTA CCGGCAGATAGAAAG TERM 3272 2918339 - 2918327 - g 82 -7.7 -4.65669 | overlap 2918325 GACAGAAAAAAAAGA GATGG GGG CCATC TACCGGCAGATAGAA TERM 3273 2918442 - 2918427 - g 76 -3.3 -5.15634 | GATTCCATCAAAAAA CAGAT CATCGC ATCTG AGCAGAAAATTTCTG gumC2 2917503 - 2919686 + | GumC2 TERM 3274 2919871 - 2919881 + G 100 -6.8 -5.82172 | overlap 2919869 TTCCACCTCCCGCCA GGCA GTC TGCC TTTTTTTCTATTCAT TERM 3275 2920648 - 2920638 - g 87 -8.2 -4.87318 | TTCAAAACTTAAAAA CGCC CAG GGCG TGATCCATGAATCCA HRM2_25580 2919703 - 2922033 + | O-antigen polymerase involved in exopolysaccharide biosynthesis TERM 3276 2922124 - 2922104 - T 83 -11.9 -2.63435 | overlap 2922103 CTAACCATCCATAAG TTCCAGCCA CGC TGGCCGGAA TCGGCCCATGGCGTA HRM2_25590 2922847 - 2922149 - | hypothetical protein HRM2_25600 2923429 - 2922860 - | putative methyl-accepting chemotaxis transmembrane protein HRM2_25610 2924202 - 2923432 - | hypothetical protein TERM 3277 2924086 - 2924109 + g 74 -11.8 -2.76261 | overlap 2924076 2924085 CTTCTGGGTTATCAC CCTGTCATTG ATCA CAATGGCAGG CTTTGACACTTCAAC HRM2_25620 2924234 - 2925025 + | TPR repeat family protein HRM2_25630 2925461 - 2925030 - | hypothetical protein TERM 3278 2925558 - 2925507 - R 100 -13 -3.75153 | overlap 2925508 TGTCGTTAATGCAAA CGGGTCAGGCCTACTATATGTTGC AGGT GCAACACGGCATAGGCCTGACCCT GAAACAATTAATCCC TERM 3279 2925557 - 2925508 - R 100 -16.5 -2.84878 | overlap 2925507 GTCGTTAATGCAAAC GGGTCAGGCCTACTATATGTTGC AGGT GCAACACGGCATAGGCCTGACCC TGAAACAATTAATCC HRM2_25640 2926273 - 2925566 - | putative cold-shock inducible membrane protein xseA 2926828 - 2928186 + | XseA xseB 2928164 - 2928391 + | XseB HRM2_25670 2928348 - 2929298 + | putative polyprenyl synthetase TERM 3280 2929518 - 2929556 + G 71 -7.5 -4.07568 | gap 1, overlap 2929519 TTCCCTTTGATACCC TTGTGTGGGATGTAGGCC ACCA GGCTTACA-CCCACAAAC TTTTGACCGGGCGGG TERM 3281 2929519 - 2929555 + G 74 -11 -3.04398 | gap 1, overlap 2929518 TCCCTTTGATACCCT TGTGTGGGATGTAGGCC ACCA GGCTTACA-CCCACAAA CTTTTGACCGGGCGG TERM 3282 2930264 - 2930252 - g 91 -5.5 -5.40072 | opp_overlap 2930252 GGGTGTGTAAAAAAA GGAAG CTC CCTCC CCTCTTATACGGATA TERM 3283 2930983 - 2930973 - g 74 -2.4 -5.13521 | AAATGATCGAAAAAA CCGG GGC CCTG GTAACGGCCGAAGAG dxs 2929319 - 2931187 + | Dxs TERM 3284 2931261 - 2931246 - g 70 -4.7 -4.63218 | GCTTGTGGAACAAAA CCTTG TCCAGT CAAGG GAACGCGCAAGGGCC TERM 3285 2931886 - 2931863 - g 82 -10.3 -3.83026 | opp_overlap 2931865 CCCGGGGATATGAAA CAGGAGAGG TCATCC CCTCCCCTG TTCCAGGACCAAAGG HRM2_25690 2931184 - 2931960 + | putative hemolysin A-like rRNA methylase TERM 3286 2932896 - 2932908 + G 74 -6.9 -4.32857 | TCCTGATCCAGACGC CCCGT TCT GCGGG TTTGTCTTTAACACC TERM 3287 2933508 - 2933535 + G 82 -10.6 -3.89215 | CGACTGCTGGATCGT TCTTGAGCCCCT TCCC AAGGGCTCAGGA TTTGAATTTGTGGAC fusA3 2931994 - 2934063 + | FusA3 TERM 3288 2934125 - 2934068 - T 74 -10.5 -2.70232 | overlap 2934073 2934077 GTCAAGAGTAGATGA CCTAACCCACAGGTCTGCCGGAGCTGA GCCT TCAGTTCCGGCAGGCCCCCATGTCAGA TGATCCCTCCGTTTA TERM 3289 2934116 - 2934077 - T 90 -12.8 -2.55722 | overlap 2934073 2934068 AGATGACCTAACCCA CAGGTCTGCCGGAGCTGA GCCT TCAGTTCCGGCAGGCCCC CATGTCAGATGATCC fabG4 2934900 - 2934121 - | FabG4 TERM 3290 2934213 - 2934224 + g 74 -7.2 -4.25256 | overlap 2934215 CAGCAGCCACCTCCC CGGG ACGC CCCG TTCTTTTCATCGGAA HRM2_25720 2935463 - 2934930 - | hypothetical protein TERM 3291 2934971 - 2934995 + g 77 -10.9 -3.55801 | overlap 2934974 CGGGCAGTGCAACTT CAATGGATTTT TCA GAAATCCATTG TTTAAAGCCGTTGAT HRM2_25730 2937856 - 2935460 - | putative membrane proteine (RND exporter superfamily) HRM2_25740 2937963 - 2939270 + | ABC-type sugar transport system, periplamsic solute-binding protein TERM 3292 2939579 - 2939567 - g 100 -3.3 -6.14618 | opp_overlap 2939567 CACAAAACAAAAAAA GCGTC CTT GACTC ATTGTATGCTTTCTG HRM2_25750 2939260 - 2941113 + | two-component hybrid sensor and transmitter protein HRM2_25760 2941123 - 2941791 + | two-component response receiver and regulator protein purC 2942692 - 2941805 - | PurC TERM 3293 2942130 - 2942143 + g 76 -6.7 -4.58283 | AAATAGATTTGAATG CTCAG GTCC CTGAG TTTTTCAGCCCGTTC TERM 3294 2942367 - 2942381 + g 79 -7.8 -4.57073 | ACAATGCACTCCACC GGCAGG GGT TCTGCC TTTTTAACAAGCATG HRM2_25780 2942970 - 2944235 + | putative WD-40 repeat protein tmcC1 2944254 - 2944913 + | TmcC1 tmcB1 2944974 - 2946308 + | TmcB1 TERM 3295 2946321 - 2946309 - f 82 -10.5 -3.69373 | overlap 2946301 GAAATACCCGAATAA CCGGC ATG GCCGG AGCATGCGAACTGCT tmcA1 2946314 - 2946799 + | TmcA1 HRM2_25820 2946859 - 2947212 + | two-component response receiver and regulator protein HRM2_25830 2947260 - 2949578 + | sensory box histidine kinase and response regulator protein TERM 3296 2950262 - 2950249 - g 71 -5.9 -4.33274 | overlap 2950250 TTTATATCAGGAAAA CCCGC CCAG GCGGA AGTCACCTACAAGAC TERM 3297 2950558 - 2950548 - g 100 -6.8 -5.42198 | overlap 2950551 2950552 CCTCAAAAAAGAAAA CCAG CAC CTGG CCCAGGAGGGTCTGG TERM 3298 2950593 - 2950620 + G 73 -11.4 -2.96779 | opp_overlap 2950599, overlap 2950592 CATGAAGCTCATGAC GTCAAAGATCAG AAAA CTGATCCTTGAC ATTCTCTTTTACACA HRM2_25840 2949562 - 2951136 + | sensory box histidine kinase and response regulator protein HRM2_25850 2951153 - 2951647 + | putative acetyltransferase (GNAT family protein) TERM 3299 2953306 - 2953316 + G 73 -3.2 -5.0133 | overlap 2953303 ATCTCACCCAGGCCC TTCC CCA GGGA TTTTTTGGAAACCTC TERM 3300 2953684 - 2953669 - g 70 -2.6 -5.00616 | gap 1, overlap 2953671 TTGCCCTTGAAAAAA TATCAGG AGA CCTGA-A GGTAAAGGCAGACCG TERM 3301 2953683 - 2953671 - g 74 -7.7 -4.13561 | overlap 2953669 GCCCTTGAAAAAATA TCAGG AGA CCTGA AGGTAAAGGCAGACC TERM 3302 2954564 - 2954547 - g 86 -3.3 -5.53288 | overlap 2954548 2954549 GGCAATTTAAAAAAA GCCTCCC TGGA AGGAGCC ATCACCCTTTCCTCG TERM 3303 2954647 - 2954629 - g 70 -2.4 -5.0133 | overlap 2954631 CAGCCCTTGAAAAAA TCCTGG GATCCGT CCAGAA TCGTTCAACCACCCA TERM 3304 2955031 - 2955045 + G 76 -8.6 -4.17048 | opp_overlap 2955030 CCCAGGAACAATACG GGGATA TTC TATCCC TTCTTTTAACCGGAA HRM2_25860 2951631 - 2955422 + | hypothetical protein TERM 3305 2956131 - 2956117 - g 76 -4.2 -5.00616 | GGGCTTTTTAAAAAA TGACGG TTT CAGTCA ACATCAACTTGACGA TERM 3306 2957402 - 2957414 + G 73 -3.3 -4.99043 | GCCCCTGAGGCCATT GCAGA GGA TCGGC TTTTCTTTCTCGGCG HRM2_25870 2955419 - 2957758 + | putative outer membrane surface antigen protein HRM2_25880 2957845 - 2958012 + | hypothetical protein TERM 3307 2958512 - 2958523 + G 71 -7.2 -4.10795 | opp_overlap 2958502 2958511 GCAAAGGGCAAGCAT CCCC AGCT GGGG TTTGAATTTTTTTCA HRM2_25890 2958245 - 2959270 + | hypothetical protein topB 2961884 - 2959317 - | TopB TERM 3308 2960967 - 2960988 + g 73 -5.7 -4.56775 | overlap 2960969 TCTGTCCTGGTACAG GGCCTGGGC AATG GCCAGGGTC TTTTTGGCCGGAAAT TERM 3309 2962140 - 2962152 + r 71 -3.4 -5.00616 | TACAGATCCCTAATT TGTG GTGGG CACA TTTTTTCCCCGGGCA HRM2_25910 2962349 - 2962134 - | putative GTP-binding protein HRM2_25920 2962576 - 2962307 - | hypothetical protein HRM2_25930 2962561 - 2962773 + | hypothetical protein TERM 3310 2962959 - 2962949 - g 84 -4.6 -5.25803 | opp_overlap 2962949, overlap 2962919 AACTTTCACAAAAAA CCGG GAC CCAG GTCGTCGGTTTCGGG TERM 3311 2963270 - 2963282 + G 71 -6.2 -4.37092 | opp_overlap 2963261 CCAATATGGCCCGCA CCGG GCTGA CCGG TTTTCTGAAAACCAT fabG5 2962786 - 2963577 + | FabG5 mtgA 2964638 - 2963898 - | MtgA TERM 3312 2964352 - 2964336 - G 100 -12.3 -4.82901 | GTTGTGGGATAAAAA CCGCTGA TCT TCAGCGG CAATGACTGCTCTTC HRM2_25960 2965658 - 2964900 - | hypothetical protein HRM2_25970 2968573 - 2966072 - | putative fusion protein (N:peptidase-C:desuccinylase) TERM 3313 2966682 - 2966652 - G 91 -4.7 -5.56263 | gap 1 ATCATAAAAGAAAAA TGCCCCAGATACCT GGCG AGGT-CCCGGTGCA TAAATTCCAGGAGGG TERM 3314 2968203 - 2968223 + g 71 -5.3 -4.52589 | opp_overlap 2968181 2968202 ACTATTTTTAACGAT GCCGGGC CGCAATA GCCAGGC TTTTGTCTGAAAGAA HRM2_25980 2968583 - 2969008 + | putative thiosesterase family protein TERM 3315 2969023 - 2969047 + T 95 -3 -6.02914 | gap 1 GACTTATAGATCGCT GTTTG-TCATT ACTC AATGATCAAGC TTTTTTTTATATGAA TERM 3316 2969129 - 2969141 + T 80 -10.5 -3.48276 | GAGCCATACCTCGTT CCGGC CGT GCCGG TTATATGAAACGCCC TERM 3317 2969218 - 2969230 + T 91 -10.5 -4.1891 | overlap 2969191 AGCAGATATCATGCT CCGGC CAT GCCGG TTTATATTAAAGCGC HRM2_25990 2972035 - 2969246 - | putative hydantoinase/oxoprolinase fusion protein (hydantoin converting enzyme) TERM 3318 2969319 - 2969305 - G 70 -2.8 -4.87665 | opp_overlap 2969305 2969311 TTCGACCCAGAAAAA GTGG AATACCG CCAC TGGTATTTACCACCT TERM 3319 2970173 - 2970149 - G 71 -11.5 -2.72043 | opp_overlap 2970151, overlap 2970148 2970151 AAGGGTTTGGGAAAG CATGGAAAGTC TAT GGCTTTCCATG TACTGCAAGGCAGGT HRM2_26000 2972180 - 2972491 + | hypothetical protein TERM 3320 2972729 - 2972754 + F 81 -5.5 -5.18561 | gap 1, opp_overlap 2972730, overlap 2972730 CGGGTGGCTTGGACA ACTCTGTTACTG ACT CAG-AACAGAGG TTTTTTGCCTGTTTA TERM 3321 2972730 - 2972753 + F 75 -9 -3.6951 | gap 1, opp_overlap 2972730, overlap 2972729 GGGTGGCTTGGACAA CTCTGTTACTG ACT CAG-AACAGAG GTTTTTTGCCTGTTT TERM 3322 2972753 - 2972730 - f 71 -9 -3.28712 | gap 1, opp_overlap 2972729 2972730 GGGTGGCTTGGACAA CTCTGTTACTG ACT CAG-AACAGAG GTTTTTTGCCTGTTT HRM2_26010 2973102 - 2973338 + | hypothetical protein TERM 3323 2973350 - 2973403 + T 100 -12.4 -3.9693 | opp_overlap 2973350 2973362 ATAACAAAATGTAAA GCAGTGGGAAAAGGGGGGCACAGG ATTGGG TCTGTGATCCCCTTGGACCACTGC TTATTTCGCTGCATA TERM 3324 2973403 - 2973350 - T 83 -9.5 -4.0089 | opp_overlap 2973350, overlap 2973362 ATAACAAAATGTAAA GCAGTGGGAAAAGGGGGGCACAG GATTGGGT CTGTGATCCCCTTGGACCACTGC TTATTTCGCTGCATA HRM2_26020 2974176 - 2973757 - | predicted transposase HRM2_26030 2974468 - 2974310 - | hypothetical protein HRM2_26040 2974669 - 2974478 - | predicted transposase HRM2_26050 2974866 - 2975177 + | hypothetical protein HRM2_26060 2975185 - 2975532 + | hypothetical protein HRM2_26070 2975676 - 2976662 + | putative ribonuclease T2-family protein TERM 3325 2976761 - 2976812 + T 100 -17.4 -3.40601 | opp_overlap 2976739 2976771 2976789, overlap 2976771 GAATGCTGTCGGAGT TCATTAAAAAGGCCGCCCCAGC CGAAAATA GCCGGGGCGGCCTTTATAAAGA TTACTCTTGAATTTA TERM 3326 2976771 - 2976802 + T 100 -15.8 -3.89881 | opp_overlap 2976771 2976789, overlap 2976761 GGAGTTCATTAAAAA GGCCGCCCCAGC CGAAAATA GCCGGGGCGGCC TTTATAAAGATTACT TERM 3327 2976802 - 2976771 - T 100 -18.7 -4.7373 | opp_overlap 2976761 2976771, overlap 2976789 GGAGTTCATTAAAAA GGCCGCCCCAGCC GAAAAT AGCCGGGGCGGCC TTTATAAAGATTACT HRM2_26080 2979561 - 2976829 - | putative penicillin acylase precursor; contains small and large subunit TERM 3328 2978988 - 2978973 - G 70 -3.2 -4.87665 | TCGTACGTATAAAAA CATCTG TCGG CAGCTG GTCCGGCCCGAAAAT TERM 3329 2979985 - 2980008 + r 83 -9.6 -3.922 | CTTTAAGTATTTTAC GCTGAGAAAC AGTT GGTTCTCAGC TTTGCTTCACGCTTT HRM2_26090 2980220 - 2979981 - | hypothetical protein TERM 3330 2980181 - 2980191 + g 89 -2.6 -5.81412 | TTCGTTCCAGAGTTC TATT TCG AATA TTTTTTTTACCTACA HRM2_26100 2982199 - 2980436 - | putative serine/threonine protein kinase TERM 3331 2981686 - 2981673 - G 72 -3.8 -4.77165 | opp_overlap 2981674 TTTTGGATAATAAAA CAGG CATCGC CCTG TTCACCCTGTTTTAT TERM 3332 2981946 - 2981959 + g 74 -2.3 -5.1963 | overlap 2981947 CATTTTCCTACACAC CGGCA TAGG TGCCA TTTTTGTTCATTGCG HRM2_26110 2982472 - 2982218 - | hypothetical protein TERM 3333 2982833 - 2982802 - R 100 -11.1 -5.27938 | gap 1, opp_overlap 2982799 2982804 2982806 AGTTGTAAACAAAAA TAGACCATT-CGCT AAAAA AGCGTAATGGTCTA TCCTGATTTAATTAT TERM 3334 2982804 - 2982831 + r 71 -9.3 -2.90456 | gap 1, opp_overlap 2982802, overlap 2982799 2982806 TTGTAAACAAAAATA GACCATT-CGCT AAAAA AGCGTAATGGTC TATCCTGATTTAATT HRM2_26120 2983705 - 2982959 - | putative transposase (ATPase domain protein) HRM2_26130 2985317 - 2983629 - | putative integrase family protein (integrase domain protein) TERM 3335 2983883 - 2983899 + gr 91 -5.1 -5.40474 | GCTCCAAAAAGTCGA TGATCTG GTC CAGTTCA TTTTTTTCCGGCAAT TERM 3336 2985161 - 2985175 + gr 86 -5.6 -5.28683 | opp_overlap 2985152 CAAGTAGGAGTGGCC CCGGAA TAA TGCCGG TTTTTTGATATTGAT HRM2_26140 2985885 - 2985304 - | hypothetical protein TERM 3337 2985671 - 2985654 - G 70 -9.9 -3.28924 | opp_overlap 2985653 2985652 CATTGCTGGGGAGAA TGTCTCC AATT GGAGACA AATTGCTGATAACCT dnaG8 2986256 - 2985885 - | DnaG8 HRM2_26160 2986955 - 2986557 - | hypothetical protein HRM2_26170 2987450 - 2987145 - | hypothetical protein HRM2_26180 2991004 - 2987453 - | putative 2-component fusion protein (N: adenylate cyclase-C:G-protein signalling modulator) TERM 3338 2990353 - 2990342 - G 83 -3 -5.46698 | opp_overlap 2990342 TTGAAAATTAAAAAA TTGA TTGG TCAA TTTGTAGGTTTTCGG HRM2_26190 2991213 - 2992043 + | hypothetical protein TERM 3339 2992141 - 2992155 + F 70 -2.8 -5.03314 | overlap 2992147 CAGCGTCCCTGATTT TCATGG CCT CAATGA TTTTTTCAAAATCGG HRM2_26200 2992193 - 2992306 + | hypothetical protein TERM 3340 2992385 - 2992328 - f 100 -14.5 -3.74347 | opp_overlap 2992328 2992329 2992339, overlap 2992339 2992350 TTTATAAATCTGAAA TGTGAACTTAACCCATTAAGAACACAA CATG TTGTGTTCTTAATGGGTTAAGTATAGC GTTTTTGGGGTAAAA TERM 3341 2992328 - 2992386 + F 100 -18.7 -4.62069 | gap 1, opp_overlap 2992328 2992339 2992350, overlap 2992329 2992339 TTTATAAATCTGAAA TG-TGAACTTAACCCATTAAGAACACAA CATG TTGTGTTCTTAATGGGTTAAGTATAGCG TTTTTGGGGTAAAAA TERM 3342 2992329 - 2992385 + F 100 -20 -3.3692 | gap 1, opp_overlap 2992328 2992339 2992350, overlap 2992328 2992339 TTATAAATCTGAAAT G-TGAACTTAACCCATTAAGAACACAA CATG TTGTGTTCTTAATGGGTTAAGTATAGC GTTTTTGGGGTAAAA TERM 3343 2992339 - 2992374 + F 100 -20.8 -3.13743 | opp_overlap 2992339 2992328 2992350, overlap 2992329 2992328 GAAATGTGAACTTAA CCCATTAAGAACACAA CATG TTGTGTTCTTAATGGG TTAAGTATAGCGTTT TERM 3344 2992374 - 2992339 - f 100 -20.8 -3.1996 | opp_overlap 2992329 2992328 2992339, overlap 2992328 2992350 GAAATGTGAACTTAA CCCATTAAGAACACAA CATG TTGTGTTCTTAATGGG TTAAGTATAGCGTTT HRM2_26210 2992467 - 2992658 + | hypothetical protein HRM2_26220 2992658 - 2992963 + | putative transposase TERM 3345 2993367 - 2993350 - g 85 -4.1 -5.41143 | TACCGGTTAAAAAAA GCTGATA TTGT CACCAGC TGGTCAGGTTTGAGG HRM2_26230 2992942 - 2993451 + | transposase (IS4 family protein) TERM 3346 2993478 - 2993458 - f 78 -4 -5.10461 | gap 1, overlap 2993461 TGCATGTAAGAAAAA GCACTTGGC CGGA GCCAAG-AC AACAGGAAATTTATT TERM 3347 2993476 - 2993461 - f 71 -9 -3.39664 | overlap 2993458 ATGTAAGAAAAAGCA CTTGGC CGGA GCCAAG ACAACAGGAAATTTA uvrB2 2993695 - 2993808 + | UvrB2 TERM 3348 2994663 - 2994676 + G 89 -2.3 -5.75342 | overlap 2994664 TCTGGATTATATTGA TCAGG ATTT CCTGC TTTTTTTTGACGAAA uvrB3 2993812 - 2994804 + | UvrB3 TERM 3349 2994826 - 2994840 + G 76 -4.2 -5.03994 | opp_overlap 2994794 2994821 AAGAATTCAAGGGCT TGGTGC CCC GGACCA TTTTTGTGTCTGCCA uvrB4 2994786 - 2995505 + | UvrB4 uvrB5 2995577 - 2995672 + | UvrB5 TERM 3350 2996058 - 2996043 - f 77 -10.4 -3.14564 | GTATGGCGGTAGGAA TGCCGG TTAC CCGGCA CCCCCCGCACAGATC TERM 3351 2997289 - 2997315 + G 72 -3.7 -4.89477 | opp_overlap 2997289 2997291 AGTGTACGCAGTCAA TATGCCGACTC CTCCC GAGTCAGAATA TTTTCTTGTTAAGAA TERM 3352 2997509 - 2997521 + G 73 -3.3 -5.00138 | CCGGTTCCTGAGCCC GCAAC GAT GATGC TTTTTGGTTTAGGTC HRM2_26280 2997005 - 2997577 + | hypothetical protein TERM 3353 2997660 - 2997690 + T 100 -17.7 -2.8194 | opp_overlap 2997665, overlap 2997665 TACCTCAGAGTGTTA GGAGAGTCTCCAC AAATA GTGGGGACTCTCC TATAATGAGTCATTC HRM2_26290 2998037 - 2997735 - | hypothetical protein TERM 3354 2998180 - 2998205 + r 100 -9.7 -5.52096 | opp_overlap 2998180 CATGTCATGGAAAAA GGCAGGGTGGA AAAG TTAACCCTGCC TTTTTTATTCCGTTT TERM 3355 2998205 - 2998180 - R 86 -7.6 -4.66609 | opp_overlap 2998180 CATGTCATGGAAAAA GGCAGGGT GGAAAAGTTA ACCCTGCC TTTTTTATTCCGTTT HRM2_26300 2999909 - 2998305 - | putative alkaline serine protease (subtilase family protein) TERM 3356 2999470 - 2999482 + gr 75 -10.5 -2.8176 | overlap 2999466 2999479 CTGTCCCCTGCCACG CCGGC AAC GCCGG TAATGTTATCGGTTA HRM2_26310 3000235 - 2999861 - | hypothetical protein HRM2_26320 3001124 - 3000453 - | putative reverse transcriptase/maturase family protein HRM2_26330 3001758 - 3001105 - | retron-type reverse transcriptase (RNA-directed DNA polymerase) TERM 3357 3002441 - 3002474 + GH 74 -2.5 -5.08169 | gap 1, opp_overlap 3002444 3002445, overlap 3002444 3002444 3002447 CTGGATATACCTATA AAAC-TGTGGAACAGA ATC TCTGCTCCATACGTTC TTTTTTAAGGTATCT TERM 3358 3002454 - 3002444 - gH 71 -5.4 -4.46155 | opp_overlap 3002444 3002444 3002441 3002447, overlap 3002445 GATATACCTATAAAA CTGT GGA ACAG AATCTCTGCTCCATA TERM 3359 3002444 - 3002471 + GH 70 -4.2 -4.63089 | gap 1, opp_overlap 3002444 3002445, overlap 3002444 3002441 3002447 GATATACCTATAAAA C-TGTGGAACAGA ATC TCTGCTCCATACG TTCTTTTTTAAGGTA TERM 3360 3002919 - 3002899 - gH 100 -9.1 -4.82901 | opp_overlap 3002884, overlap 3002915 CCTTTTTCAGAAAAA GATCATCTG CAT CAGATAATC CGTGATTATATGCGG xerC 3001915 - 3003144 + | XerC TERM 3361 3003543 - 3003566 + GF 78 -3.9 -5.07053 | GTCGGTGAATGTTTA TATCGACAT CTCATC ATGCCGATA TTTTTTCGGATCATT HRM2_26350 3003111 - 3004127 + | predicted phage-specific integrase TERM 3362 3004213 - 3004194 - g 70 -2.8 -4.75404 | overlap 3004196 AAATGCCAGTAAAAA TACGATAG CATC CTACCGTG ATACCTTTAAACTGC TERM 3363 3004358 - 3004386 + G 76 -3.1 -5.1287 | opp_overlap 3004367, overlap 3004366 3004367 GCTGCATTGCAACCC GTAATCAAAGGCT TGC AGCCATTCATTCC TTTTTTAGGTATGCC TERM 3364 3004459 - 3004442 - g 70 -2 -5.03314 | TTCATTTTCAAAAAA TAATCG CCCTGC CGATCA AGAAAGCACCCAAGC HRM2_26360 3004114 - 3005127 + | phage-specific recombinase/integrase XerD TERM 3365 3006427 - 3006482 + GT 100 -18.4 -3.62476 | opp_overlap 3006427, overlap 3006432 GTCTATCCAGAGAAA GGGACGCCACAAGGTGGGTTATGCAA AGCT TTGCATAACCCGCCTTGGGGACTGCC TTCTGTGCTTGCTTG TERM 3366 3006482 - 3006427 - gT 100 -16.2 -4.0641 | opp_overlap 3006427 3006432 GTCTATCCAGAGAAA GGGACGCCACAAGGTGGGTTATGCAA AGCT TTGCATAACCCGCCTTGGGGACTGCC TTCTGTGCTTGCTTG TERM 3367 3006432 - 3006478 + GT 100 -19.7 -2.64765 | gap 1, opp_overlap 3006427, overlap 3006427 TCCAGAGAAAGGGAC G-CCACAAGGTGGGTTATGCAA AGCT TTGCATAACCCGCCTTGGGGAC TGCCTTCTGTGCTTG ltrA 3007061 - 3006414 - | LtrA HRM2_26370 3005863 - 3006603 + | retron-type reverse transcriptase (RNA-directed DNA polymerase) TERM 3368 3007779 - 3007803 + G 100 -11.4 -4.68424 | opp_overlap 3007779 CGGGCAAACAAAAAA GGCAGGGTGG TAATT CAACCCTGCC TTTTTAGATCACTTG TERM 3369 3007803 - 3007779 - g 100 -11.4 -5.63517 | opp_overlap 3007779 CGGGCAAACAAAAAA GGCAGGGTGG TAATT CAACCCTGCC TTTTTAGATCACTTG HRM2_26390 3007601 - 3007810 + | hypothetical protein TERM 3370 3007862 - 3007901 + T 74 -7.9 -4.06687 | gap 2, overlap 3007865 CACTCTTTTGCTTTC CGTTGC-GCGGCAA-CCTG AAGT CAGGATTGCCGCCGCATAG TTATTTGTAAACCGT TERM 3371 3007865 - 3007898 + T 93 -12.6 -3.07135 | gap 2, overlap 3007862 TCTTTTGCTTTCCGT TGC-GCGGCAA-CCTG AAGT CAGGATTGCCGCCGCA TAGTTATTTGTAAAC HRM2_26400 3009956 - 3007902 - | putative alkaline serine protease (subtilase family protein) TERM 3372 3009720 - 3009736 + g 76 -2.9 -5.06735 | AAGGGCATGCACAGG CACCTTG ATC CGACGTG TTTTTATGCTTTCTA TERM 3373 3009888 - 3009875 - G 70 -9.5 -3.28712 | TGTCTGCCTGGACAA GGCCG GATC CGGCC AGAACCAATACCATT TERM 3374 3009916 - 3009899 - G 70 -9.9 -3.29325 | opp_overlap 3009897 3009896, overlap 3009893 3009897 CGGCCAGAACCAATA CCATTGC GATG GCAATGG TCACTATTGTCTGCA TERM 3375 3010062 - 3010087 + H 73 -9.7 -2.91395 | overlap 3010061 3010066 GGACCCATAAGCTTT GTGAACCGTGG TTAC CCACGGGTTAC CTTTGTCGGAAACGT HRM2_26410 3010334 - 3010534 + | hypothetical protein TERM 3376 3010550 - 3010536 - f 75 -8.6 -3.83214 | overlap 3010527 TTAAATCAATGTAAA TTGGCA TTA TGCCAA GACGTCCGAGAATAG TERM 3377 3011148 - 3011120 - g 70 -4.5 -4.63172 | GATCAAATCAGAAAA GCCACGAATGGAA ATT TTGCATTGGGGGC CAAACGATTTCAGGA HRM2_26420 3010544 - 3011236 + | putative transposase HRM2_26430 3011804 - 3011508 - | putative transcriptional regulator HRM2_26440 3012142 - 3011804 - | hypothetical protein TERM 3378 3012162 - 3012147 - R 70 -7.6 -3.73775 | opp_overlap 3012146 3012147 TCCATCTTCATTAAA GTAGCT TTTA AGCTAC ATATTGTCAAGTTTA HRM2_26450 3012790 - 3012554 - | hypothetical protein HRM2_26460 3012885 - 3013169 + | putative C4-dicarboxylate transporter family protein (DctM subunit) HRM2_26470 3013554 - 3013363 - | hypothetical protein recD2 3015556 - 3013559 - | RecD2 TERM 3379 3014518 - 3014469 - G 74 -4.1 -5.00616 | gap 1, opp_overlap 3014448, overlap 3014448 3014471 3014510 GTCGCCGGCAAAAAA CAGGCGGTGGCCGGGCTTTCGCAA AGA TCGCCAAGGACAGACC-CCGCCTC CACCGAGGCAAGCTG TERM 3380 3014516 - 3014471 - G 71 -6.7 -4.13561 | gap 1, opp_overlap 3014448, overlap 3014448 3014469 3014510 CGCCGGCAAAAAACA GGCGGTGGCCGGGCTTTCGCAA AGA TCGCCAAGGACAGACC-CCGCC TCCACCGAGGCAAGC recB 3019268 - 3015540 - | RecB TERM 3381 3016584 - 3016623 + g 84 -10.6 -4.00348 | overlap 3016585 CATCTCCTTGCCAGG CGGGGGCAGCGGGGTAAT GACA ATGGCGTCGCTGCCCCCC TTTAATTCGTTCAAA TERM 3382 3016585 - 3016622 + g 83 -14.1 -2.99727 | overlap 3016584 ATCTCCTTGCCAGGC GGGGGCAGCGGGGTAAT GACA ATGGCGTCGCTGCCCCC CTTTAATTCGTTCAA TERM 3383 3017991 - 3018023 + g 79 -13.5 -2.85437 | overlap 3017988 3017985 ACGAAAGGCGTAGAT GGCCTGTTTGGGATC CCC GATCATGAACAGGCC TGATTGCTCTTGGTC TERM 3384 3019047 - 3019023 - G 73 -6.4 -4.56597 | gap 1, opp_overlap 3019026 3019027 3019029 CCTTCCCCTGAAAAA GGCACAGGCTT CGGT AAGCCGG-GCC CTGATTCTTTCCCTG recC 3022891 - 3019271 - | RecC TERM 3385 3022573 - 3022560 - G 100 -5.2 -5.87688 | opp_overlap 3022560 AGAATGGAAAAAAAA CGCC ACACCA GGCG TTCCCTGTCATAGGG TERM 3386 3024096 - 3024070 - g 72 -8 -3.92522 | TTTTAAGGGGAGAAA CCCTGATTCGAT CCA ACCGGATCAAGG AGGCCCAATCCCTGT HRM2_26510 3023184 - 3024476 + | putative TPR repeat:RNA-processing protein rluD2 3025423 - 3024527 - | RluD2 TERM 3387 3024917 - 3024929 + g 86 -5.5 -5.30575 | overlap 3024905 GGGCCTTCGGGTAAC GGCCT CGT AGGTC TTTTTTACCTTTTTC HRM2_26530 3025903 - 3025436 - | hypothetical protein TERM 3388 3026055 - 3026036 - R 82 -7.8 -4.52266 | opp_overlap 3026051 AAGCAAACAGCAAAA CCACGGGA AATC CCCCATGG TCATAGGCTTCTATT TERM 3389 3026051 - 3026076 + r 75 -9.1 -3.60627 | opp_overlap 3026036 CCACGGGAAATCCCC CATGGTCATAG GCTT CTATTACCATG TTTCCAGTCCAATGC hrpB 3028664 - 3026130 - | HrpB TERM 3390 3027112 - 3027092 - G 81 -13.3 -3.12351 | opp_overlap 3027092 GCTCGGGATAGGCAA GGGCCAGAA GGT TTCCGGCCC TGTTGGGATCAACAC TERM 3391 3027092 - 3027112 + g 74 -11.1 -3.05844 | opp_overlap 3027092 GCTCGGGATAGGCAA GGGCCAGAA GGT TTCCGGCCC TGTTGGGATCAACAC TERM 3392 3028783 - 3028762 - R 77 -3.7 -5.20328 | opp_overlap 3028765, overlap 3028765 TTTGAAAAAAATAAA CAATAGCAG AAAA CCGCTATTT CTTCAGCTTAAAATC TERM 3393 3028780 - 3028765 - R 73 -5.4 -4.65305 | opp_overlap 3028765, overlap 3028762 GAAAAAAATAAACAA TAGCAG AAAA CCGCTA TTTCTTCAGCTTAAA ssuB 3029498 - 3028884 - | SsuB ssuC 3030306 - 3029533 - | SsuC TERM 3394 3029990 - 3029964 - GR 76 -7.2 -4.32034 | CCAGCAGCAGCAAAA TGACTCCCAGGA TGA CCCCGGGTATCA CCTGGACCATCATCA ssuA 3031204 - 3030257 - | SsuA TERM 3395 3030499 - 3030516 + gr 73 -5.5 -4.63218 | opp_overlap 3030490 3030488 3030487, overlap 3030501 GAACGATCAGATCCC CATGGGT CCCG ACCCAGG TTTTATTGACAAGGG TERM 3396 3030986 - 3030976 - GR 80 -2.4 -5.40072 | overlap 3030953 3030952 GCCCCCTTAAAAAAA GGGC ATG GGCC TGGGAGTGATTGTGA hydA2 3032976 - 3031177 - | HydA2 TERM 3397 3031271 - 3031287 + gr 80 -2.2 -5.41143 | TGGAGAAGCTCATGA CTCTTG TGGCC CAGGGG TTTTTTTAAAAAATC TERM 3398 3031875 - 3031885 + gr 91 -8.2 -4.59773 | GAAATTCAGGTCGCT GGGC TTC GCCC TTTTTGGCCGTACAG TERM 3399 3032080 - 3032092 + gr 76 -7.7 -4.08557 | opp_overlap 3032080 3032077 GCAGGAGGTAAACAT GGGAA GGG TTCCC TTGTTCTTTAAGCGA gltD1 3034970 - 3032991 - | GltD1 TERM 3400 3033947 - 3033929 - G 95 -12.4 -4.30809 | CAATACCTAGGAAAA CAGCGGCG TAG CACCGCTG TGAAAGGTCATCCAG TERM 3401 3034071 - 3034096 + g 79 -11.1 -3.53031 | gap 1 GCGGTACTCGGGAAT TCCCGTGGCTGC CAT GCCGCC-CGGGA TTGATTTCCCCTCAA TERM 3402 3034598 - 3034577 - G 71 -10.9 -3.04792 | gap 1, opp_overlap 3034578 CCAGCACTTCTAACA GGGC-AACGG TCG CCGTTTGCCC GAGCCCGCAAAGGGA TERM 3403 3034992 - 3035002 + r 85 -4 -5.4505 | CGTCCCGTTTTTTAT TAAC CCT GTTA TTTTTTATTCAGGGG trmA 3036687 - 3035299 - | TrmA TERM 3404 3036698 - 3036709 + H 95 -7.2 -5.5604 | overlap 3036693 3036692 TTCATATGTTTCCCA GCCC CTGG GGGC TTTTTTATTGGTTGG HRM2_26610 3036717 - 3037517 + | CinA HRM2_26620 3038766 - 3037495 - | putative hydrolase of the alpha/beta superfamily TERM 3405 3037927 - 3037939 + g 70 -3.3 -4.82901 | ACAGCTTTCGGCAAG GGCTA TGG TTGCC TTTTTCTGAACCAGA TERM 3406 3038139 - 3038123 - G 77 -10.8 -3.5394 | opp_overlap 3038119 AAATCCGCCCTGAAA CCCGGC CTGAC GCCGGG AAACTGGGTTGCCAA TERM 3407 3038727 - 3038695 - G 70 -11.4 -2.51133 | gap 1, overlap 3038694 3038698 3038702 CAGGGAGGCAGCAAG CCAGGAAGCGTTGGT GTCA ACCA-CGCCTCCTGA AACAATCTCATCTCC TERM 3408 3038854 - 3038871 + H 73 -3.5 -5.00616 | overlap 3038856 AATAACCGGGTTATC TGCTAAA GTCT TTTAGTA TTTTTTACCCCAAGC argC 3038925 - 3039962 + | ArgC HRM2_26640 3040020 - 3040949 + | putative metalloendopeptidase; cell wall-binding protein associated metalloendopeptidase TERM 3409 3041131 - 3041119 - f 75 -9.1 -3.58361 | overlap 3041115 ACAAAAACGAACTAA CCAGC ATG GCTGG AACATGATATCGGCT TERM 3410 3042608 - 3042595 - g 90 -5.9 -5.24449 | overlap 3042596 GACAAACTGAAAAAA CGGGG CATT CCCCA CACGGTTCTCAATGC TERM 3411 3043460 - 3043489 + G 72 -10.1 -3.48276 | gap 1, opp_overlap 3043447 AAGAGGGAATCGGCC TCAG-GGGTTATGC CCA GCAGAACCCGCTGA TTCTCTACAAAAAAG TERM 3412 3043620 - 3043633 + G 74 -2.3 -5.11033 | overlap 3043621 CATTCAGAAACCGAG GCAGG AAAA CCTGG TTTTTTCCCATTCTG TERM 3413 3043681 - 3043669 - g 76 -3.3 -5.12707 | TCAAACGTTAAAAAA CCCGT TAA ACGTG CCCAGGAAAAAGTGG secA 3041236 - 3043758 + | SecA TERM 3414 3043835 - 3043823 - g 100 -5.5 -5.82388 | AAAGTTGAAAAAAAA GAAGG GTA CCCTC CCATGTACAGGGTTG clpS 3043766 - 3044080 + | ClpS TERM 3415 3044272 - 3044253 - g 95 -6.4 -5.38054 | GGTCATAAAGAAAAA CCTGGATA CCTT TTTCCAGG AAAAGATGACCGTCA TERM 3416 3044588 - 3044575 - g 100 -8.1 -5.23016 | opp_overlap 3044575, overlap 3044566 AAACAACCCAAAAAA TCGGG AAAG CCCGA TCCATTGACCCTTTT clpA 3044083 - 3046332 + | ClpA TERM 3417 3046652 - 3046666 + G 79 -11.4 -3.62046 | opp_overlap 3046644 TACGTAACCGCTCGG GCCAGG GTA CCTGGC TTGTTCAGGAAATGA TERM 3418 3046914 - 3046904 - g 73 -5.4 -4.66163 | ACTGCCAGGTAAAAA CAGA TCA TCTG GTCTCCATGGGAGGG TERM 3419 3046964 - 3047005 + G 77 -11.1 -3.37685 | gap 1, opp_overlap 3046988, overlap 3046962 ATTTCCTGACCCGGA TCCACGGCTCCCTTGA AAAAAAAACGA TCAAGGGA-CCGTGGA TATTTACAGGGTTTT TERM 3420 3047001 - 3046988 - g 100 -4.5 -6.06723 | opp_overlap 3046964 3046962 CCCTTGAAAAAAAAA CGATC AAGG GACCG TGGATATTTACAGGG aat 3046333 - 3047022 + | Aat uspA14 3047552 - 3047019 - | UspA14 TERM 3421 3047059 - 3047078 + g 75 -9.2 -3.82031 | opp_overlap 3047051 ACAAGGACAGGTTTC CGGGACCT TCTG AGGACCCG TTTGGTGATACTTCC TERM 3422 3047327 - 3047337 + g 79 -6.8 -4.67904 | overlap 3047336 TCAGGGAATGGCGGG CCTC CTG GAGG TTTTTGACCTTGATC HRM2_26700 3049307 - 3047577 - | putative TRAP-type transporter, 4TM/12TM fusion protein TERM 3423 3048295 - 3048281 - G 71 -6.4 -4.30576 | CCGTGAGCATGAAAA TGGTGA TGA CCACCA GGGGAAGGGTATAAA TERM 3424 3049371 - 3049349 - R 100 -10.6 -4.29829 | overlap 3049363 ACAATTAGCAACAAA GGGACGGA TATAAAC TCCGTCCC CGGGGTCAAATTTCT HRM2_26710 3050359 - 3049385 - | putative TRAP-type transporter, periplasmic component (TAXI family protein) TERM 3425 3050576 - 3050564 - R 80 -10.5 -3.41795 | AAACTTTCAGTATAA CCGGC ACG GCCGG AACGGGGTATGGGCT TERM 3426 3050895 - 3050883 - R 80 -10.5 -3.48593 | GAGTTTCTTATATAA CCGGC ACG GCCGG AGCGGGGTATGGAGC TERM 3427 3050965 - 3051011 + r 100 -19.6 -3.35046 | opp_overlap 3050966, overlap 3050966 3050970 AGGTATTCCAAAAAA ATAAAGCCCCTGGAAAAGCCCG ATA CAGACTTTTCCAGGGGCTTTAA TGTTTAAAGCGGTGC TERM 3428 3051010 - 3050966 - R 100 -27.5 -5.44119 | opp_overlap 3050966 3050965 3050970 GGTATTCCAAAAAAA TAAAGCCCCTGGAAAAGCCCG ATA CAGACTTTTCCAGGGGCTTTA ATGTTTAAAGCGGTG TERM 3429 3050966 - 3051010 + r 100 -23.1 -2.60813 | opp_overlap 3050966, overlap 3050965 3050970 GGTATTCCAAAAAAA TAAAGCCCCTGGAAAAGCCCG ATA CAGACTTTTCCAGGGGCTTTA ATGTTTAAAGCGGTG TERM 3430 3050970 - 3051006 + r 100 -19.5 -4.00532 | opp_overlap 3050966, overlap 3050966 3050965 TTCCAAAAAAATAAA GCCCCTGGAAAAGCCCG ATA CAGACTTTTCCAGGGGC TTTAATGTTTAAAGC HRM2_26720 3051231 - 3051043 - | iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) HRM2_26730 3052337 - 3051324 - | hypothetical protein TERM 3431 3051492 - 3051476 - G 73 -8.7 -3.68222 | opp_overlap 3051475 3051479, overlap 3051479 GTTGAACGTCAACAA TAACGGC ACA GCCGTCA CTTGCCTCGATCAAT TERM 3432 3051489 - 3051479 - G 74 -8.2 -3.97139 | opp_overlap 3051479 3051475, overlap 3051476 GAACGTCAACAATAA CGGC ACA GCCG TCACTTGCCTCGATC cysS3 3054627 - 3052348 - | CysS3 TERM 3433 3052789 - 3052812 + g 79 -11 -3.62096 | opp_overlap 3052788 CCCTGCGTCAATGAG CCCCTGGCTT GAGA AGGTCAGGGG TTTACGATAGTGACA TERM 3434 3053916 - 3053926 + g 83 -5.4 -5.0917 | TCGCAAAGGCGGTTT CATC GTC GATG TTTATTTTTTCATCC TERM 3435 3054484 - 3054502 + g 71 -10.2 -3.14132 | opp_overlap 3054483 CCCCTGTTCAATCAT GGACAGGG CAG CCCGGTCC TTAATGGACCCGCCA tmk 3055317 - 3054634 - | Tmk TERM 3436 3055810 - 3055825 + G 81 -6.2 -4.96848 | ATGACGGCACCATCT TTGTTC AGGA GAACAA TTTTTATATCCGGGG TERM 3437 3057125 - 3057107 - g 70 -11 -2.52676 | overlap 3057110 3057113 CAGGGTTGCAAGGCA GAACCAGG TAA CCTGGTCC GTGACAAACCGATTT ostA 3055407 - 3057788 + | OstA HRM2_26770 3057785 - 3058309 + | transcriptional antiterminator (SH3-like protein) TERM 3438 3058348 - 3058369 + F 100 -7.3 -5.75342 | TGTTTAGATAGAGTT TTACACCCC ACCT GGGGTTTAA TTTTTTTTACGGAAA ihfB 3058444 - 3058719 + | IhfB TERM 3439 3058891 - 3058868 - g 85 -12.4 -3.71649 | overlap 3058861 3058869 TTGGGAAAGTTGAAA CGGCCCTTGC CTTT GCAAGGGCCC TGAACTGCCAGGGAG TERM 3440 3058890 - 3058869 - g 88 -15.9 -2.82668 | overlap 3058868 3058861 TGGGAAAGTTGAAAC GGCCCTTGC CTTT GCAAGGGCC CTGAACTGCCAGGGA TERM 3441 3059716 - 3059684 - g 100 -4.2 -6.07627 | gap 1, opp_overlap 3059699, overlap 3059685 ATGTTGAAAAAAAAA TCAAGGCCAATGCAG GCAT CCG-ATTGACCTTGG AGGCTTTTTTGTTTA TERM 3442 3059715 - 3059685 - g 74 -7.7 -4.22949 | gap 1, opp_overlap 3059699, overlap 3059684 TGTTGAAAAAAAAAT CAAGGCCAATGCAG GCAT CCG-ATTGACCTTG GAGGCTTTTTTGTTT TERM 3443 3059699 - 3059720 + G 84 -2.2 -5.64421 | opp_overlap 3059685 3059684 TCAAGGCCAATGCAG GCATCCGA TTGACC TTGGAGGC TTTTTTGTTTAAGCT holB 3058723 - 3059760 + | HolB TERM 3444 3060488 - 3060461 - g 76 -6.2 -4.66264 | CAAAACCTGGAAAAA TTGTTGAGACCC CCAA GGGTCCCGGCAA GGTAATTCGCCAGAA HRM2_26800 3059788 - 3060609 + | hypothetical protein TERM 3445 3062091 - 3062117 + G 72 -3.6 -4.86731 | overlap 3062086 3062093 GGCATGGGGTCAAGG CCGGGACCTT GATCCAA AAGGCCCCTG TTTTGTTTCCACGAA TERM 3446 3062298 - 3062286 - g 80 -2.7 -5.31275 | TTTCAGCAGAAAAAA TTGAA GGC TCCAA TAAACTTTTAAAACT metS 3060596 - 3062542 + | MetS pbpA 3062924 - 3064042 + | PbpA TERM 3447 3064545 - 3064522 - g 71 -5.2 -4.45945 | overlap 3064512 3064509 ACTGACGAATTAAAA CAGCGAATGG TTGA CCTTTCCCTG GTTCAAGTCGACACG TERM 3448 3064691 - 3064636 - g 78 -4 -5.15117 | gap 1, overlap 3064638 GAAAACCTTAAAAAA GTTCACGATCTTTCCCTTGCCCCCCCC ACG GGGGCAACCATGGAAGAGATCAT-AAC ATTCAAAAAAATCAA TERM 3449 3064727 - 3064703 - g 100 -10.1 -5.52909 | TAACATTCAAAAAAA TCAATGCCGTT CTT AACAGCATCGA CCGGCTTGAGGTCAG glmS 3064063 - 3067779 + | GlmS TERM 3450 3067777 - 3067822 + T 100 -8.6 -4.85782 | gap 3, opp_overlap 3067782 3067783 3067788, overlap 3067780 3067781 3067782 ATTGAGGCCAGGGGA TAAA-AC-GACAAGGGTCAGGCT TGA AGCCTGACCCT-GTCAGCCTTTA TTTATTTTTCAAGGA TERM 3451 3067780 - 3067818 + T 89 -7.5 -4.94811 | opp_overlap 3067782 3067783 3067788, overlap 3067777 3067781 3067782 GAGGCCAGGGGATAA AAC-GACAAGGGTCAGGCT TGA AGCCTGACCCT-GTCAGCC TTTATTTATTTTTCA TERM 3452 3067781 - 3067817 + T 83 -11 -3.54447 | opp_overlap 3067782 3067783 3067788, overlap 3067780 3067777 3067782 AGGCCAGGGGATAAA AC-GACAAGGGTCAGGCT TGA AGCCTGACCCT-GTCAGC CTTTATTTATTTTTC TERM 3453 3067782 - 3067816 + T 100 -14.5 -2.70228 | opp_overlap 3067782 3067783 3067788, overlap 3067781 3067780 3067777 GGCCAGGGGATAAAA C-GACAAGGGTCAGGCT TGA AGCCTGACCCT-GTCAG CCTTTATTTATTTTT TERM 3454 3067815 - 3067782 - T 100 -16.9 -4.4009 | gap 1, opp_overlap 3067781 3067780 3067777 3067782, overlap 3067783 3067788 GGCCAGGGGATAAAA CGACAAGGGTCAGGCT TGA AGCCTGACCCT-GTCA GCCTTTATTTATTTT TERM 3455 3067814 - 3067783 - T 100 -18.2 -3.23733 | gap 1, opp_overlap 3067782 3067781 3067780 3067777, overlap 3067782 3067788 GCCAGGGGATAAAAC GACAAGGGTCAGGCT TGA AGCCTGACCCT-GTC AGCCTTTATTTATTT TERM 3456 3067810 - 3067788 - T 100 -17.8 -3.72405 | opp_overlap 3067782 3067781 3067780 3067777, overlap 3067783 3067782 GGGATAAAACGACAA GGGTCAGGCT TGA AGCCTGACCC TGTCAGCCTTTATTT pyrG 3069454 - 3067820 - | PyrG eno 3070806 - 3069535 - | Eno HRM2_26860 3071380 - 3070898 - | hypothetical protein TERM 3457 3071525 - 3071540 + G 70 -9 -3.63744 | overlap 3071523 CCGGATACATTGGAA GCCACA CCTG TGTGGC TCTTTTAAACCAGGG galE1 3071485 - 3072504 + | GalE1 TERM 3458 3072590 - 3072623 + GF 81 -11 -3.35046 | opp_overlap 3072579 3072589 3072590, overlap 3072575 CATATCCTGGCAAAT CTTCCCGGTGAACC GGACAG GGTGTGCCGGGAAG TGTTTCAAAGGCTCG TERM 3459 3073667 - 3073648 - gf 71 -8.6 -3.55071 | CTATATTGCCTCAAA CTACCTGT TAAA ACAGGCAG CAATCTCTCCCCTCC HRM2_26880 3072512 - 3074128 + | two-component response receiver and regulator protein TERM 3460 3074269 - 3074279 + GF 82 -8.2 -4.39426 | CCGATACCATTTACT GGCC CAC GGCC TTTTATGCAGGTCTG TERM 3461 3074489 - 3074479 - gf 71 -6.8 -4.11216 | CCTTTATTGCTAAAA TCCC AAG GGGA TCATCCAGGGGAAAG rimK1 3073950 - 3074912 + | RimK1 TERM 3462 3075315 - 3075285 - g 77 -12.8 -2.78715 | AAGGTGCCTATGATA TCAGCCTCAATTTT TCA AAAATTGAAGCCGA CAAACTCATATTTGA HRM2_26900 3075161 - 3075553 + | hypothetical protein HRM2_26910 3076127 - 3075606 - | hypothetical protein TERM 3463 3076627 - 3076646 + G 73 -11.4 -2.90723 | opp_overlap 3076606 3076618 ACTCAACCGCGCCTG GTCCTCCC AGAA GGGGGGAC TGTGGTTCACCATCA birA 3076295 - 3077209 + | BirA TERM 3464 3077544 - 3077534 - g 84 -2.4 -5.54192 | ATCAACTCAAAAAAA CCCG AAC CGGT GATGCAGTCGCCATG TERM 3465 3077709 - 3077684 - g 76 -8.3 -4.26903 | gap 1 GTGATCTGATTAAAA TCGGTGCCGCAA TCT TTGCCGC-CCGA ATCATAAGACAGGTG HRM2_26930 3077206 - 3077733 + | BioY family protein cbiO2 3077730 - 3078488 + | CbiO2 TERM 3466 3078925 - 3078949 + G 70 -2.7 -4.7657 | overlap 3078928 CCTTGTTCCACAGGC CAGGGTTGCCG TGA TGGTCAGCCTG TTTTTAAGGTTTTTG cbiQ2 3078476 - 3079231 + | CbiQ2 TERM 3467 3079305 - 3079338 + F 100 -14.1 -4.42806 | opp_overlap 3079305 TAGAGAATACAAAAA GGGGTTAGAGAAA TTAACTTT TTTCTCTAACCCC TTTATTTAACAATGG TERM 3468 3079338 - 3079305 - f 100 -14.1 -5.1764 | opp_overlap 3079305 TAGAGAATACAAAAA GGGGTTAGAGAAA TTAACTTT TTTCTCTAACCCC TTTATTTAACAATGG TERM 3469 3079633 - 3079650 + F 88 -9.9 -4.208 | opp_overlap 3079627 ATATATAGAGCTTTA TGGGCTT TGTC AAGCCCA TTTATGCTTTTACAA TERM 3470 3080553 - 3080536 - g 95 -2.1 -5.86965 | gap 1, opp_overlap 3080536, overlap 3080538 AGGGATGAAAAAAAA TTC-TCAA ATC TTGAAGAA CTTTCAAACCAGATT ribF 3079678 - 3080607 + | RibF TERM 3471 3080586 - 3080604 + F 76 -11 -2.62263 | opp_overlap 3080584 AAACGACATTCAACT GGCAAGGG AGA TCCTTGCC TAATATAACCGGCAT def 3080726 - 3081250 + | Def TERM 3472 3081268 - 3081256 - g 76 -2.7 -5.12617 | CAACCATTGAAAAAA CCATT TAA AATAG TGTTCATGGGAACCC TERM 3473 3081416 - 3081386 - g 100 -6.8 -5.41143 | gap 1 GACGGGGGAAAAAAA TGGTGCCGCCGCC GGTCAA GGTAGCGGC-CCA GGAACTGGGGCTAAG TERM 3474 3081911 - 3081877 - g 100 -14.3 -5.03314 | CCCATGCTGAAAAAA TCCGACGGCAGGATC GACTG GACCCTGTCGCCGGA AAAAATCTCAGCCCA TERM 3475 3082138 - 3082126 - g 79 -9.1 -4.25104 | opp_overlap 3082125 GGGGCCTCAGGAAAA CGGCT CAC AGCCG CTGATTTCCTCAGGG fmt 3081247 - 3082191 + | Fmt TERM 3476 3083471 - 3083483 + G 71 -7.7 -4.09243 | opp_overlap 3083456 TCCCATGACCTGGCG TCCCA GGA TGGGA TTTTCAAAACCTATC rsmB 3082184 - 3083551 + | RsmB rpe 3083573 - 3084241 + | Rpe TERM 3477 3084646 - 3084676 + G 77 -10.3 -3.5393 | opp_overlap 3084637 AGATAACGGGCCTTG GCTCCCTGGGCTA CAGGC TCGCCCTGGGGGC TTTGAAAGAGCTGAT aroQ 3084243 - 3084698 + | AroQ HRM2_27040 3084695 - 3085453 + | 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase HRM2_27050 3085492 - 3085953 + | CBS domain family protein TERM 3478 3085957 - 3085947 - T 100 -6.8 -5.72207 | GGCAAACGAAAAAAA GGGT TGA ACCC AATCTCATGAAAAAT HRM2_27060 3086603 - 3085962 - | hypothetical protein HRM2_27070 3086879 - 3087556 + | hypothetical protein HRM2_27080 3089127 - 3087577 - | two-component response receiver and regulator protein purB 3090528 - 3089134 - | PurB TERM 3479 3090694 - 3090680 - H 70 -2.8 -5.0133 | overlap 3090681 TATGGGGTCAAAAAA CGATGA TTT TCACCA CAAAAAGCTTGACAA TERM 3480 3090888 - 3090865 - g 100 -4.5 -5.69379 | ATATAATGAAAAAAA CCATCGCCT TTTTTG AGGCAAAGG GAAAGACAAAACTCA TERM 3481 3091163 - 3091153 - g 79 -8.2 -4.37439 | AAAAAAAACGAGAAA CCGC CCA GCGG CTTGAAGATGGGGAT acd9 3090792 - 3092489 + | Acd9 TERM 3482 3092712 - 3092700 - g 70 -9.1 -3.52813 | overlap 3092698 AAATCATAAAAGAGA CCCTG GAG CAGGG AGAAGATGTCATGAT ihfA 3092591 - 3092917 + | IhfA TERM 3483 3092949 - 3092996 + T 100 -12 -5.00616 | overlap 3092950 3092952 3092991 3092994 GAATCACATTGATCT TACCAGCCACACGGACCCTGGA ATTA TTTAGGGTCTGTGTGGCTGTCC TTTTTTAAAGGAAGG TERM 3484 3092950 - 3092995 + T 100 -15.5 -3.60048 | overlap 3092949 3092952 3092991 3092994 AATCACATTGATCTT ACCAGCCACACGGACCCTGGA ATTA TTTAGGGTCTGTGTGGCTGTC CTTTTTTAAAGGAAG TERM 3485 3092952 - 3092993 + T 100 -22.5 -3.37655 | overlap 3092950 3092949 3092991 TCACATTGATCTTAC CAGCCACACGGACCCTGGA ATTA TTTAGGGTCTGTGTGGCTG TCCTTTTTTAAAGGA mauE 3093482 - 3093036 - | MauE TERM 3486 3093123 - 3093101 - G 81 -6.2 -4.96848 | TCCCGCACACAAAAA GCCCCATATC CCT GACAAGGAGC CAGGATGCAGCCGAG HRM2_27130 3094032 - 3093469 - | putative rhodanese-like sulfurtransferase family protein TERM 3487 3093766 - 3093784 + gr 70 -7.4 -3.7732 | opp_overlap 3093766 CCGATCTTTCACAAA CCTTGCCA TTG TGTCAAGG TTATTGATCTCCCGG TERM 3488 3093784 - 3093766 - GR 70 -7.4 -3.86897 | opp_overlap 3093766 CCGATCTTTCACAAA CCTTGCCA TTG TGTCAAGG TTATTGATCTCCCGG HRM2_27140 3094232 - 3093969 - | TPR repeat family protein TERM 3489 3094055 - 3094043 - GR 75 -9.1 -3.62597 | overlap 3094053 CCCATTGTTCAACAA GCCCT GAA AGGGC TGATAAATCAGCTGA ftsB 3094535 - 3094245 - | FtsB mviN 3096106 - 3094535 - | MviN TERM 3490 3095043 - 3095020 - G 82 -6.7 -4.8487 | GGATGAAAAAAAGAA GTGCCGAGG CAGTCT CCTCAACAC ACAAACGGTCAAAGG TERM 3491 3095500 - 3095488 - G 70 -3.3 -4.85433 | AGAGAAATTGAAAAA GGCCT CCA AGGAC CACTCCCAGGGCAAG TERM 3492 3095845 - 3095820 - G 87 -4.5 -5.4492 | opp_overlap 3095826, overlap 3095840 GAGACAGATAAAAAA CAGGCCCGGGC CATG GCAAAGGCCCG TTTGGGTCCATCTTC TERM 3493 3095826 - 3095845 + g 73 -9.2 -3.68506 | opp_overlap 3095820 3095840 GATAAAAAACAGGCC CGGGCCAT GGCA AAGGCCCG TTTGGGTCCATCTTC TERM 3494 3095995 - 3095961 - G 91 -2.7 -5.83226 | AAGGCAAGAAAAAAA GCGTCACTTCCCGGG CCAAC CCCCAGAAGCCATGC AATAAAGGCATCCCG TERM 3495 3096048 - 3096060 + g 100 -4.7 -5.75945 | ACCAGGGTAAGCCCT CCGAC AAC GCCGG TTTTTTTTAACAGCT TERM 3496 3096412 - 3096400 - g 91 -4.8 -5.5943 | AAAGCAGCAAAAAAA GGTG TTATT CACC AGAACACTGCCGCAC rpsT 3096211 - 3096462 + | RpsT TERM 3497 3096499 - 3096534 + T 79 -7.8 -4.32857 | opp_overlap 3096499 AAGTTTTTGCAAAAA CAGGATTTGTCA AAGCTCCTCACA TGACAAATCCTG TTTCTATTTCAACCG TERM 3498 3096534 - 3096499 - T 82 -7.8 -4.57341 | opp_overlap 3096499 AAGTTTTTGCAAAAA CAGGATTTGTCA AAGCTCCTCACA TGACAAATCCTG TTTCTATTTCAACCG HRM2_27180 3097068 - 3096553 - | hypothetical protein leuS 3099662 - 3097071 - | LeuS rne2 3099975 - 3101438 + | Rne2 HRM2_27210 3101498 - 3102322 + | hypothetical protein HRM2_27220 3102334 - 3102681 + | putative preprotein translocase, subunit YajC TERM 3499 3102886 - 3102873 - g 74 -4.5 -4.81249 | GTTCAAAGCGAAAAA GCCGT TGAA ACGAC CCTTGAACGAACTAT TERM 3500 3104223 - 3104239 + G 86 -5.2 -5.24989 | overlap 3104196 ACAGCCCTTGTGCTG TCAAAG AGTTG CTTTGA TTTTTTCATATCTGG secD 3102705 - 3104282 + | SecD secF 3104300 - 3105334 + | SecF TERM 3501 3105427 - 3105417 - g 72 -8.2 -3.82098 | overlap 3105418 CACAATGAAGTCAAA GCCC GTC GGGC CGGCGGCCCACAAGA TERM 3502 3105659 - 3105639 - g 85 -7.5 -4.79949 | opp_overlap 3105651 3105654 TCCCCAAAAAAATAA TCCCCACCC CGT GTATGGGGA GCCCATTCTTTTATA TERM 3503 3105651 - 3105667 + G 74 -6.5 -4.3739 | opp_overlap 3105639, overlap 3105654 TAATCCCCACCCCGT GTATGGG GAG CCCATTC TTTTATACAACAGTG TERM 3504 3105654 - 3105664 + G 74 -6.8 -4.30995 | opp_overlap 3105639, overlap 3105651 TCCCCACCCCGTGTA TGGG GAG CCCA TTCTTTTATACAACA HRM2_27250 3105334 - 3106029 + | TPR domain family protein dprA 3106041 - 3107159 + | DprA TERM 3505 3107825 - 3107809 - gf 76 -2.9 -5.20333 | GATTGACAACAAAAA GGCCG TTATTCC CGACC AGCAGACTGCCGAAA TERM 3506 3108003 - 3107988 - gf 75 -9 -3.60685 | opp_overlap 3107993 CGGCAAAAAAAACCA TGCTGG TAGC CCAGCA ACTCTATGAAGGCAT TERM 3507 3108202 - 3108181 - gf 70 -3 -4.855 | gap 2 CAAAAATAAAAACAA GGCC-CA-GG ATGC CCATGAGGCC ATCAGGCCAACTTCG TERM 3508 3108368 - 3108393 + GF 75 -10.6 -2.78327 | opp_overlap 3108366 3108387, overlap 3108367 GCGCTGAATTACACC TTTACCGTTG GCGGAA CAACGGTAAA ATTTCCGGGTTTCAT TERM 3509 3108475 - 3108458 - gf 91 -7.7 -4.90917 | overlap 3108451 AAAGCCAAGCAAAAA CTGCCCA TAAT TGAGCAG GGCATGGGGCTTGAA topA 3107162 - 3109432 + | TopA TERM 3510 3109677 - 3109689 + GF 88 -4.1 -5.56264 | TTTAAAGTCTCTTCT CGTTG TCT CAATG TTTTTTCTATTTACG TERM 3511 3110798 - 3110816 + GF 75 -8.2 -3.85817 | opp_overlap 3110797 3110795 3110798 3110808, overlap 3110799 TTCCAAGCGAAAGAC TCAAAACC GAG GGTTTTGG TTTCTCAAGACCCGT TERM 3512 3110799 - 3110815 + GF 71 -9.5 -2.91276 | opp_overlap 3110797 3110798 3110795 3110808, overlap 3110798 TCCAAGCGAAAGACT CAAAACC GAG GGTTTTG GTTTCTCAAGACCCG ompA2 3109387 - 3110898 + | OmpA2 TERM 3513 3110950 - 3110906 - f 76 -9.5 -3.43722 | gap 3, overlap 3110899 3110904 3110908 3110909 TTCAGTAACAGAACA CATTGTGGTCAGTCCTGCACCC CCAA GGGTGCAGGATTGACC-CA--G ACTTCCCCACCACTT TERM 3514 3110950 - 3110908 - f 100 -15.7 -3.28453 | gap 1, overlap 3110899 3110906 3110904 3110909 CAGTAACAGAACACA TTGTGGTCAGTCCTGCACCC CCAA GGGTGCAGGATTGACC-CAG ACTTCCCCACCACTT TERM 3515 3110949 - 3110909 - f 100 -19.2 -2.56349 | gap 1, overlap 3110899 3110906 3110908 3110904 AGTAACAGAACACAT TGTGGTCAGTCCTGCACCC CCAA GGGTGCAGGATTGACC-CA GACTTCCCCACCACT TERM 3516 3111121 - 3111103 - g 71 -6.6 -4.18702 | opp_overlap 3111102 ACAATGTGGAAGAAA CCCGCTAC CAA GTGGCAGG CCTTTCATTTGATTT prmA4 3111042 - 3111698 + | PrmA4 TERM 3517 3111790 - 3111830 + F 75 -8.2 -3.86524 | overlap 3111791 GCGCAGTTTTACCAT TCGTTGTGGCCAGAGCCG ATACC CTGCTTTGGCCATGCCGG TTTATAGAGGAATCT TERM 3518 3111791 - 3111829 + F 71 -9.5 -2.91593 | overlap 3111790 CGCAGTTTTACCATT CGTTGTGGCCAGAGCCG ATACC CTGCTTTGGCCATGCCG GTTTATAGAGGAATC TERM 3519 3112633 - 3112620 - g 100 -5.2 -5.85244 | AATGAAAATAAAAAA GCCC TTGACC GGGC AGGCGAGTTGAAATC HRM2_27300 3111849 - 3113444 + | ABC-type transporter, ATP-binding protein HRM2_27310 3114497 - 3113454 - | dipeptide/oligopeptide transport system, inner membrane permease component HRM2_27320 3115525 - 3114494 - | dipeptide/oligopeptide transport system, inner membrane permease component TERM 3520 3115354 - 3115333 - G 70 -8.7 -3.53012 | opp_overlap 3115335 3115348 TCTGTTCTTCTGAAA GGGGCTG TCCTGCCC CAGCCCC GCCGTTTCCGGAAGC alaS1 3118140 - 3115522 - | AlaS1 TERM 3521 3115612 - 3115635 + g 79 -5.1 -5.03314 | overlap 3115613 CGGCCGGCCACCGCC TCCGCCGCC CACAAT GGCAGCGGC TTTTTTAACAATGGC TERM 3522 3116219 - 3116208 - G 73 -5.8 -4.56775 | ATTTTTCCTCAAAAA GAGC CGTT GCTC CGGATTTAACAGCCT TERM 3523 3116661 - 3116650 - G 76 -7.2 -4.37886 | TGATTCGGCATAAAA CGGG GTGG CCCG GGTAACGATCTCAAT recA 3119216 - 3118173 - | RecA pgpA 3119692 - 3119243 - | PgpA TERM 3524 3119400 - 3119387 - G 89 -2.3 -5.79595 | overlap 3119388 CCTGAAAATAAAAAA TCCTG CCAC CAGGG TGGAAAGGGTAACGG HRM2_27360 3120906 - 3119704 - | hypothetical protein TERM 3525 3120060 - 3120072 + g 70 -4.9 -4.66609 | AAACATCAAGGGCAC CTTTT TTT AAAAG TTTTTCCATGAGATA pepT 3122050 - 3120911 - | PepT TERM 3526 3121206 - 3121223 + g 71 -5.5 -4.52589 | overlap 3121207 ACCATCACCTCGATC CGGGGAA GGGT TTCCCCC TTTTGTCTAAAGGCA TERM 3527 3123028 - 3123006 - g 76 -4.9 -4.94243 | gap 1, overlap 3123007 3123008 CGAAAAAAAGGAAAA CCGGGCAAGT TGGA ACTTGCC-GA CGGGGGGACCCTTTT TERM 3528 3123374 - 3123363 - g 74 -4.4 -4.86033 | overlap 3123371 AAACTCGGAGAAAAA GCAA AAAA TTGC CTGTCCAGTTACCAC TERM 3529 3123400 - 3123371 - g 100 -10.7 -5.56112 | overlap 3123363 AGAAAAAGCAAAAAA TTGCCTGTCCAGT TACC ACTGGCCGGGCAA CGTCAGGGAACTTGT TERM 3530 3123709 - 3123653 - g 76 -5.2 -4.82901 | gap 1, opp_overlap 3123668, overlap 3123663 3123670 CCTGCTTTACAAAAA GCTTAAAAAACACAACATCCCCCTGGG CTAA CCC-GTGGGAGGGTGTATCTATTAAAC AACACCTGCAGCCAA HRM2_27380 3122271 - 3123683 + | sigma-54 dependent transcriptional regulator TERM 3531 3123699 - 3123663 - f 77 -3.6 -5.16472 | gap 1, opp_overlap 3123668, overlap 3123653 3123670 AAAAAGCTTAAAAAA CACAACATCCCCCTGGG CTAA CCC-GTGGGAGGGTGTA TCTATTAAACAACAC dctP5 3123899 - 3124981 + | DctP5 TERM 3532 3125358 - 3125377 + G 80 -2.2 -5.43553 | AAAAAAAGCCGCCAT TGAGAT CCTGGGAT ATCTCA TTTTCTTTTTTCCCT dctQ5 3125080 - 3125592 + | DctQ5 TERM 3533 3125707 - 3125723 + G 87 -4.3 -5.47431 | TGTTTTCGGTATGCT TGGCTGG GGA CCGTCCA TTTTTTATCTGTTCA TERM 3534 3126818 - 3126828 + G 76 -5.4 -4.81814 | ATGGATATTTACCGA GGTA TTG TACC TTTTGTTCTGCTGAT dctM5 3125585 - 3126916 + | DctM5 TERM 3535 3127675 - 3127663 - g 80 -3.4 -5.26875 | TTTTCAAGGAAAAAA GAGA TGATG TCTC CCATTGACGTCGGCA fabG6 3126940 - 3127854 + | FabG6 TERM 3536 3127842 - 3127878 + F 77 -10.2 -3.17146 | gap 1, opp_overlap 3127839 3127838, overlap 3127840 GGCATTTCAAACTTC GGTGTGGCCATGAGC CCATACCC GCTCC-GGCCACACC TATCTTATAAAAAAC HRM2_27430 3127912 - 3128067 + | hypothetical protein TERM 3537 3128649 - 3128639 - g 74 -4.6 -4.90381 | GTCAAGACAACAAAA CGGA TGC CCCG GAAAAAGACGAGGAG TERM 3538 3128826 - 3128807 - g 93 -8.5 -5.1101 | CCAGCAGGGAAAAAA GCCGGCA TGAGGC CGCCGGC ATGGATATCAATTTT TERM 3539 3129962 - 3129943 - g 100 -5 -5.75478 | overlap 3129944 3129950 AAGGAGACAAAAAAA CCCAATAC GCCT GTATTGGC GCCCCAGGACAAACC TERM 3540 3129961 - 3129944 - g 74 -8.5 -4.02846 | overlap 3129943 3129950 AGGAGACAAAAAAAC CCAATAC GCCT GTATTGG CGCCCCAGGACAAAC TERM 3541 3131146 - 3131162 + G 77 -10.1 -3.68351 | AAAATTAATCTTGAT GTGCCTG TTG CAGGCGC TTTGGATGATCCAAA HRM2_27440 3128236 - 3131838 + | hypothetical protein HRM2_27450 3132068 - 3132268 + | hypothetical protein TERM 3542 3132307 - 3132284 - f 70 -3.8 -4.88228 | opp_overlap 3132284 ACTTAACAGTAAAAA TGCTTTTCCA AAAA TGGAATCGCA TGAATTTGAGGAGGA TERM 3543 3132432 - 3132445 + G 85 -3.8 -5.40072 | TGAAGATAGCGTATC CGGA ATTTTA TCCG TTTTTTTCAAAGCCC TERM 3544 3132932 - 3132910 - g 74 -9.8 -3.53012 | overlap 3132928 GCCGGTTGGGGTAAA GGCCAGCCTT GAC AAGGACGGCC TGGCCGATAAGATTG HRM2_27460 3132332 - 3133099 + | ABC-type amino acid transporter, periplasmic amino-acid binding protein TERM 3545 3133501 - 3133491 - g 80 -2.6 -5.42259 | CCATTTGGAAAAAAA TATA TTT TATA ACAAAAAGCATATTG TERM 3546 3135208 - 3135191 - g 79 -6.9 -4.72617 | TGATAAAACAAGAAA GCCCGGG TGTT CCCGAAC TGCTCGCCGACCCTG HRM2_27470 3133153 - 3136017 + | putative signal-transducing kinase with PAS/PAC domain TERM 3547 3136059 - 3136090 + T 100 -10.2 -5.75342 | opp_overlap 3136062, overlap 3136062 AAAAGCCCAATAACA AAAGGGATCAGGAT TTTC ATCCTGACCCCTTG TTTTTTTTGGAGGCG TERM 3548 3136087 - 3136062 - T 100 -14.1 -4.90079 | opp_overlap 3136059 3136062 AGCCCAATAACAAAA GGGATCAGGAT TTTC ATCCTGACCCC TTGTTTTTTTTGGAG TERM 3549 3136062 - 3136087 + T 100 -11.9 -4.96028 | opp_overlap 3136062, overlap 3136059 AGCCCAATAACAAAA GGGATCAGGAT TTTC ATCCTGACCCC TTGTTTTTTTTGGAG pgsA 3136867 - 3136310 - | PgsA talC 3137595 - 3136948 - | TalC TERM 3550 3137470 - 3137493 + g 71 -6.6 -4.14739 | overlap 3137473 ACAGATTTCCCGGAT GATGTCGGTG AACT CGCCGGCCTC TTTTGCGATGAGTGA TERM 3551 3137615 - 3137640 + r 75 -5.3 -4.85822 | opp_overlap 3137618, overlap 3137618 CGTCTCCTTTGACAT AAACCCTGACC TCCT GGCCGGGGTTA TTTTCTATTTGTAGT TERM 3552 3137618 - 3137637 + r 76 -7 -4.50487 | opp_overlap 3137618, overlap 3137615 CTCCTTTGACATAAA CCCTGACC TCCT GGCCGGGG TTATTTTCTATTTGT folK 3138110 - 3137595 - | FolK HRM2_27530 3138544 - 3138113 - | hypothetical protein TERM 3553 3138332 - 3138344 + g 76 -4.7 -5.02074 | CTCAAACCCGGCAAT GGGAG GTA CACCC TTTTTTACCCCATAA argH2 3140037 - 3138541 - | ArgH2 argG 3141154 - 3139943 - | ArgG TERM 3554 3141155 - 3141165 + r 75 -3.2 -5.12785 | TTTTATGTCAGACAT GGGT AAT ATCC TTTATTTTTTAATTG argF 3142122 - 3141199 - | ArgF TERM 3555 3141950 - 3141969 + g 100 -9.2 -5.26918 | opp_overlap 3141936 3141949 3141950, overlap 3141951 ATGGCCGTCTCAAAG GCCACCCG GGTG CGGGTGGA TTTTTTGTCAAATAT TERM 3556 3141951 - 3141968 + g 85 -12.7 -3.75067 | opp_overlap 3141936 3141950 3141949, overlap 3141950 TGGCCGTCTCAAAGG CCACCCG GGTG CGGGTGG ATTTTTTGTCAAATA argD 3143309 - 3142134 - | ArgD TERM 3557 3142842 - 3142827 - G 74 -8.2 -4.00066 | opp_overlap 3142838, overlap 3142819 CGGACAATGGACAAA CCCGCC CACC AGCGGG GAGAACCCCTGCTTG argB 3144214 - 3143321 - | ArgB hslU 3145572 - 3144211 - | HslU TERM 3558 3145456 - 3145474 + g 72 -8 -3.86015 | opp_overlap 3145448 TAAATCATCGGGAAC CTGGCGGC GGC GCCACCGG TTTCTAAGGGCGATG hslV 3146111 - 3145569 - | HslV HRM2_27610 3147023 - 3146130 - | site-specific recombinase XerD (DNA replication, recombination and repair) HRM2_27620 3147654 - 3147025 - | predicted phage SPO1 DNA polymerase-related protein coaBC 3148889 - 3147651 - | CoaBC HRM2_27640 3149395 - 3148898 - | putative lipoprotein pilY1 3154686 - 3149539 - | PilY1 TERM 3559 3149704 - 3149715 + g 70 -4.4 -4.64861 | opp_overlap 3149704 CTTGCCAAGGGAAAT CTTC TTTT GAAG TTTGTTTTCACCGGC pilX 3155320 - 3154745 - | PilX pilV 3155742 - 3155344 - | PilV TERM 3560 3155665 - 3155640 - G 76 -11.3 -3.31461 | gap 1, opp_overlap 3155639, overlap 3155655 TAGTCAGGCCCAGAA TGCCAATGGCAA GAA TTGCCA-TGGCA ATGATTACCTCCAAA pilW 3156398 - 3155739 - | PilW fimT 3157202 - 3156423 - | FimT HRM2_27700 3157433 - 3157654 + | putative fimbrial protein PilA precursor TERM 3561 3158018 - 3157989 - g 91 -7.2 -5.20216 | overlap 3157991 3157994 GATATTATCAAAAAA CACAG-GGAGCAGC CGAT GCTGCTCCTCCG-G CTACGATCACCCCAG TERM 3562 3158017 - 3157991 - g 88 -10.9 -4.22314 | gap 1, overlap 3157989 3157994 TATTATCAAAAAACA CAG-GGAGCAGC CGAT GCTGCTCCTCCG GCTACGATCACCCCA TERM 3563 3158013 - 3157994 - g 79 -13.6 -2.80583 | overlap 3157991 3157989 TATCAAAAAACACAG GGAGCAGC CGAT GCTGCTCC TCCGGCTACGATCAC HRM2_27710 3157703 - 3158065 + | hypothetical protein TERM 3564 3158127 - 3158165 + F 91 -11.8 -3.55444 | opp_overlap 3158117 3158127 CAAAACTGATTTAAA CAGCTCACCAGAAATTAT AAT ACAGCTTCTGGTGGGCTG TTTCACCGATGGGGA TERM 3565 3158165 - 3158127 - f 93 -11.8 -3.71148 | opp_overlap 3158127, overlap 3158117 CAAAACTGATTTAAA CAGCTCACCAGAAATTAT AAT ACAGCTTCTGGTGGGCTG TTTCACCGATGGGGA HRM2_27720 3158174 - 3158953 + | ABC-type transport system, ATP-binding protein HRM2_27730 3158950 - 3159780 + | ABC-type transport system, permease component TERM 3566 3159977 - 3159993 + G 85 -3.7 -5.40072 | opp_overlap 3159954, overlap 3159959 CCTTGAATTCAAGGG GGTGGTT GCA AACTATC TTTTTTTAAAGGCCA HRM2_27740 3159792 - 3160658 + | hypothetical protein HRM2_27750 3162325 - 3160655 - | hypothetical protein TERM 3567 3160753 - 3160781 + g 71 -6.8 -4.25873 | TGTCATCGAGTGCCT TTTCAGCCATGC GGTTG GCATTGTTGAAA TCTTTTTTATCAAGA TERM 3568 3162251 - 3162239 - G 86 -3.4 -5.60993 | GCCTTGATAAAAAAA TGGT GGGAT ACCA AGGGGTAAAACAAGA HRM2_27760 3163826 - 3162423 - | sigma-54 dependent two component DNA-binding response regulator (Fis family protein) pyrC 3165107 - 3163827 - | PyrC pyrB 3166029 - 3165091 - | PyrB lepB 3166694 - 3166074 - | LepB HRM2_27800 3167992 - 3166826 - | hypothetical protein HRM2_27810 3169535 - 3168156 - | peptidase M23/M37 family protein TERM 3569 3169295 - 3169277 - G 74 -6.6 -4.30978 | overlap 3169278 GGGAACCCATGAAAA GCCCCTGG TAA CCAAGGGG TTGAAAATGCTTATC TERM 3570 3169588 - 3169561 - H 100 -3.5 -5.98781 | TATAACCAAAAAAAA TTTAACCCCAA TGAAAG TTGGAGTAAAA TAACAGCAATAGACC kdsA 3169688 - 3170518 + | KdsA kdsC 3170520 - 3171059 + | KdsC HRM2_27840 3171069 - 3171674 + | hypothetical protein HRM2_27850 3171631 - 3172164 + | putative organic solvent tolerance protein OstA precursor HRM2_27860 3172161 - 3172883 + | unclassified ABC-type transport system, ATPase component TERM 3571 3173072 - 3173055 - g 84 -10.5 -4.015 | GCATTCAGGAAATAA CCCAGGC AGAG GCCCGGG AGATTGAACGTGAAG TERM 3572 3173166 - 3173141 - g 91 -9.1 -4.75372 | opp_overlap 3173140 ACCATTGAGGAAAAA CTTTCCCAG GACACGGA CTGGGAAAG CTATATCAACGAATA TERM 3573 3173942 - 3173953 + G 70 -4.4 -4.72272 | opp_overlap 3173942 GAGAGCATCATCAAG TTCC AGCG GGAA TTTTTCCTCAACGGG TERM 3574 3174069 - 3174079 + G 74 -8.2 -3.96618 | opp_overlap 3174069 ACAAATACGCATACA CCCC CCA GGGG TTATTTGAACTTAAA rpoN 3172886 - 3174325 + | RpoN smpA 3174339 - 3174878 + | SmpA TERM 3575 3175127 - 3175185 + G 79 -7.4 -4.44318 | gap 1, overlap 3175128 GACTCCATAGTTGTC GGGTTCGGTTTGAGCCGCAAGGGAGTC TCATTT GACTCCCTTGAC-CACAAACCGGTCCA TATTTTTTTCCTGTT TERM 3576 3175128 - 3175184 + G 73 -10.9 -3.2415 | gap 1, overlap 3175127 ACTCCATAGTTGTCG GGTTCGGTTTGAGCCGCAAGGGAGTC TCATTT GACTCCCTTGAC-CACAAACCGGTCC ATATTTTTTTCCTGT ptsN2 3174896 - 3175354 + | PtsN2 HRM2_27900 3175418 - 3176239 + | putative P-loop-containing kinase manX 3176236 - 3176649 + | ManX gap4 3176725 - 3177729 + | Gap4 TERM 3577 3177914 - 3177874 - f 100 -9.2 -5.055 | gap 1, opp_overlap 3177874 GCAAGGCGCAAAAAA TTCTGAAACCGGAGCGTAC TAGT GTACG-TGAGGTTTCAGAA TTTTGCAGCAACGCA TERM 3578 3177874 - 3177914 + F 83 -9.2 -4.07568 | gap 1, opp_overlap 3177874 GCAAGGCGCAAAAAA TTCTGAAACCGGAGCGTAC TAGT GTACG-TGAGGTTTCAGAA TTTTGCAGCAACGCA tpi 3177974 - 3178729 + | Tpi secG 3178736 - 3179035 + | SecG TERM 3579 3179135 - 3179174 + F 100 -13.8 -3.90316 | opp_overlap 3179135 3179141, overlap 3179141 CTTCGGCACCAGATA TAAAAAGCCGCAATCATT GCAC AATGTTTGCGGCTTTTCA TCTTTTTAAAAGACT TERM 3580 3179174 - 3179135 - f 100 -16 -2.94099 | opp_overlap 3179135 3179141, overlap 3179141 CTTCGGCACCAGATA TAAAAAGCCGCAATCATT GCAC AATGTTTGCGGCTTTTCA TCTTTTTAAAAGACT TERM 3581 3179168 - 3179141 - f 100 -12.8 -5.05601 | opp_overlap 3179135 3179141, overlap 3179135 CACCAGATATAAAAA GCCGCAATCATT GCAC AATGTTTGCGGC TTTTCATCTTTTTAA TERM 3582 3179141 - 3179168 + F 100 -12.8 -4.60746 | opp_overlap 3179141 3179135, overlap 3179135 CACCAGATATAAAAA GCCGCAATCATT GCAC AATGTTTGCGGC TTTTCATCTTTTTAA HRM2_27960 3179196 - 3179435 + | hypothetical protein TERM 3583 3180025 - 3180010 - g 71 -5.4 -4.51799 | overlap 3180005 ACGAAATTGATAAAA TTGCCG CAAG CAGCAA TCTCAGGGGTGCTGA clpX2 3179442 - 3181184 + | ClpX2 ppqE1 3181181 - 3182368 + | PpqE1 hemB 3182371 - 3183354 + | HemB ppqE2 3183359 - 3184438 + | PpqE2 pfp 3186697 - 3184607 - | Pfp HRM2_28020 3188127 - 3186715 - | signal transduction family protein (GGDEF domain protein) TERM 3584 3188350 - 3188340 - g 100 -8.2 -6.06723 | CTGTTTAAAAAAAAA GGGG AAA CCCC GAACAAAGAGACCGG TERM 3585 3188470 - 3188455 - g 83 -3.2 -5.40072 | opp_overlap 3188437 3188432, overlap 3188457 TTTTTTCCAAAAAAA GAGTCA TTGA TGACAC CCTTTTAGAAGAGAT TERM 3586 3188578 - 3188567 - g 70 -2.2 -4.96106 | CAGAAAGAGCAAAAA GCTA TCAA CAGC CAATGAGCTCAAAGA TERM 3587 3188976 - 3188966 - g 70 -3.2 -4.89852 | TCATACCCAGAAAAA CCTC ATG GAAG AGTTGAAGAAAATCA srp 3188313 - 3189275 + | Srp HRM2_28040 3189287 - 3189610 + | hypothetical protein TERM 3588 3189623 - 3189586 - f 77 -4.7 -4.99056 | gap 1, opp_overlap 3189612, overlap 3189588 CAAGACAACGAAAAA GACACCACCGGCTGCCAC TGC ATGACC-CCGGGGGTGAC GGGTTTTCCACGGCT TERM 3589 3190391 - 3190403 + G 73 -5.5 -4.67353 | TCTTTTTCCACCTTT TGCCG CTA TGGCA TTTTTGCCTCGGTCC HRM2_28050 3189680 - 3190957 + | putative hexose phosphate transport protein HRM2_28060 3190975 - 3191205 + | hypothetical protein TERM 3590 3192578 - 3192564 - g 74 -3.6 -4.93547 | overlap 3192566 GGAATGAATTAAAAA TATTGT TCA ACAACA ACATCAAAAACCCCG HRM2_28070 3191432 - 3192919 + | sensory box histidine kinase TERM 3591 3193075 - 3193063 - g 73 -2.7 -4.96848 | CGCCTGACAGAAAAA CATTG CCC CAATA TTGTTATCATGGATA TERM 3592 3193214 - 3193202 - g 70 -3.3 -4.75776 | AATTCAACGTAAAAA GCATG ATA CAGGC CGGTGCAAAAGGATT HRM2_28080 3192916 - 3193572 + | two-component response regulator protein HRM2_28090 3194115 - 3193960 - | hypothetical protein ligA1 3196364 - 3194307 - | LigA1 TERM 3593 3196299 - 3196325 + g 80 -4.2 -5.20216 | AATGTTGTGCACATG GAGTTGCTCCCG GAG CAGGCGCGCCTC TTTTTTAATCCTGTC HRM2_28110 3197226 - 3196450 - | putative purine nucleoside phosphorylase TERM 3594 3197010 - 3197032 + gr 86 -9.1 -4.36595 | AGGGCGCCCCCATGT GGGGGCC GGTAAACGA GGCCCCC TTTTCAGTTTCGGTA TERM 3595 3197090 - 3197065 - GR 71 -8.9 -3.24827 | opp_overlap 3197064 3197068 3197073, overlap 3197057 3197068 AACAGAACCCATGAA CAAGGGGCTGC AGGT GTTGCCCCTTG CATTTGCCTTGAGAT TERM 3596 3197151 - 3197114 - GR 72 -6.1 -4.26188 | TTGAGATAGTTAAAA TCCGGGGCAGTACTCAC CATA ACGGCCACAGCCCCGGA TTCAAAGCCTGGTCT TERM 3597 3197164 - 3197183 + gr 72 -7.8 -3.80419 | GGATTCAAAGCCTGG TCTGGCCC CATA GGGCTGGA TTATTGCTCTATCAT HRM2_28120 3197452 - 3197195 - | hypothetical protein TERM 3598 3197292 - 3197314 + gr 84 -2.6 -5.68438 | overlap 3197297 3197301 AGCCGGCCTGCCTTG GACGGGGC GCGGTCA GTGCCGTC TTTTTTCTTTAATAC glyS 3199552 - 3197483 - | GlyS TERM 3599 3198079 - 3198069 - G 70 -3.2 -4.78661 | overlap 3198071 AGGGAAAAATCAAAA CCTG CCT CAAG CATGATCTGGAGAAT glyQ 3200448 - 3199549 - | GlyQ HRM2_28150 3201503 - 3200466 - | putative galactokinase TERM 3600 3200926 - 3200899 - G 73 -9.2 -3.79251 | gap 1, opp_overlap 3200923, overlap 3200886 TAGGCCACCAGCAAA TGGG-GGTCAAGG GCG CCTTCACCACCCA TGGGAACAAGGGCTT recO 3202276 - 3201500 - | RecO mgtE2 3203646 - 3202282 - | MgtE2 TERM 3601 3203241 - 3203219 - G 82 -7.6 -4.68103 | overlap 3203220 TTAAGGGCAATAAAA TCCGGCATCA TGA TGCTGCCGGC CGTATCCTCCCCATA TERM 3602 3203240 - 3203220 - G 77 -11.1 -3.40139 | overlap 3203219 TAAGGGCAATAAAAT CCGGCATCA TGA TGCTGCCGG CCGTATCCTCCCCAT ppiD2 3204619 - 3203675 - | PpiD2 TERM 3603 3203841 - 3203831 - G 72 -4 -4.8622 | CTCGTCAAGGAAAAA GATT TGA AATC CCTGGTCCGTGGGAA ppiC2 3205300 - 3204623 - | PpiC2 HRM2_28200 3205300 - 3205524 + | hypothetical protein mfd 3208996 - 3205499 - | Mfd TERM 3604 3205676 - 3205644 - G 80 -11.9 -3.42395 | overlap 3205642 3205645 TTGATCATTGAAACA CCACCGGCAAGGGCC TGG GGCCGTCGCTGGTGA ACGGCTGAAAACACA TERM 3605 3205675 - 3205645 - G 78 -13.2 -2.65116 | overlap 3205644 3205642 TGATCATTGAAACAC CACCGGCAAGGGCC TGG GGCCGTCGCTGGTG AACGGCTGAAAACAC TERM 3606 3208206 - 3208189 - G 71 -7.7 -4.06419 | overlap 3208193 GCTCGGGATAAACAA TGGAGAG CATG CCCTCCA TGCCGGGAAATCGCC TERM 3607 3209354 - 3209344 - g 73 -3.2 -4.90917 | AAACGGAACCAAAAA GCTC AAA GAAC TCTTTTCCATGCACA TERM 3608 3209489 - 3209469 - g 82 -12.5 -3.4489 | opp_overlap 3209469 AATCCGGAGAATTAA TGGAGGCCC TGC GGGCCACCA TGTCCTATCCAGGCC TERM 3609 3209469 - 3209489 + G 77 -12.5 -2.85351 | opp_overlap 3209469 AATCCGGAGAATTAA TGGAGGCCC TGC GGGCCACCA TGTCCTATCCAGGCC TERM 3610 3209714 - 3209698 - g 100 -5.8 -5.84381 | overlap 3209699 3209701 3209702 CGAGGAACAAAAAAA GGACCT CCCCC AGGCCC CCAGGGGAGAGCTGG TERM 3611 3209726 - 3209699 - g 71 -7.6 -4.09002 | overlap 3209698 3209701 3209702 GAGGAACAAAAAAAG GACCTCCCCCAG GCCC CCAGGGGAGAGC TGGCCAGAAAAATCT TERM 3612 3209724 - 3209701 - g 70 -8.8 -3.60957 | overlap 3209698 3209699 3209702 GGAACAAAAAAAGGA CCTCCCCCAG GCCC CCAGGGGAGA GCTGGCCAGAAAAAT HRM2_28220 3209075 - 3210025 + | hypothetical protein HRM2_28240 3210743 - 3210450 - | hypothetical protein TERM 3613 3210858 - 3210886 + r 86 -10.5 -3.86822 | GTACTCACATAAGTG GACTATCAGAATG ATA TATTTTGATAGTC TTTGTCGAGCAATTG HRM2_28250 3211294 - 3210863 - | hypothetical protein TERM 3614 3211398 - 3211435 + r 71 -9.7 -2.59564 | overlap 3211424 AGGTGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCGTGCCG GTTATAGAATAGCAA TERM 3615 3211424 - 3211436 + r 78 -10.5 -3.32844 | overlap 3211398 GAGCCATACCTCGCT CCGGC CGT GCCGG TTATAGAATAGCAAC HRM2_28260 3212362 - 3211652 - | hypothetical protein TERM 3616 3211931 - 3211951 + g 82 -4 -5.23316 | gap 1, overlap 3211935 GTCGGCCGCAGTGCC GAGG-CGAC CCGA GTCGATCTC TTTTTTCATCTCCTC TERM 3617 3212300 - 3212325 + g 100 -9.2 -5.47399 | GTAGATCAACTCCCT TATCTGATCA AAGGCC TGATCAGATA TTTTTTTGGGCTTGA ldhB 3213765 - 3212452 - | LdhB TERM 3618 3213222 - 3213199 - G 82 -8 -4.57837 | ACACCCGGTGAAAAA GGCCACCCTG AGAC CCGAGCGGCC GGTACGTGTATCGAC TERM 3619 3213562 - 3213595 + g 76 -5.3 -4.8622 | gap 1, overlap 3213562 CAGGCAATTGTTAAG CCGTT-TATCGACCCC ATC GGGATCGGTAAAAAGG TTTTTGCTTAGCCCG ldhA 3215151 - 3213769 - | LdhA HRM2_28290 3215266 - 3215135 - | hypothetical protein HRM2_28300 3215597 - 3215466 - | putative DNA recombination protein TERM 3620 3217120 - 3217130 + G 95 -5.4 -5.60993 | ATTTTATGTTTTGTG GTGA TCA TCAC TTTTTTTCTGCACCG lldP 3215980 - 3217695 + | LldP TERM 3621 3217728 - 3217763 + F 100 -13.4 -4.02534 | opp_overlap 3217753, overlap 3217728 3217729 3217762 TCCGGTTTGATTTTG ACCGCTTCGGCTTTTT TCAA AAAAAGCCGAAGCGCC TTTATCAATTTCGAT TERM 3622 3217729 - 3217762 + F 100 -16.9 -3.00797 | opp_overlap 3217753, overlap 3217728 3217728 CCGGTTTGATTTTGA CCGCTTCGGCTTTTT TCAA AAAAAGCCGAAGCGC CTTTATCAATTTCGA TERM 3623 3217763 - 3217753 - f 75 -2.4 -5.40072 | opp_overlap 3217729 3217728 3217762 CTTTTTTCAAAAAAA GCCG AAG CGCC TTTATCAATTTCGAT TERM 3624 3217762 - 3217814 + F 82 -7.9 -4.52589 | opp_overlap 3217753 3217785, overlap 3217728 AAAAAAGCCGAAGCG CCTTTATCAATTTCGATACAGGATT ACG ACTTCTTTGTCGGAATCGATAAGGG TTTTATCTGACCCCA TERM 3625 3218155 - 3218139 - g 76 -2.9 -5.1287 | opp_overlap 3218139 TTGAGACTCAAAAAA TCGTGGC GGC ACCAGGA CTTGATTCCGGGCTC HRM2_28320 3217931 - 3218557 + | hypothetical protein TERM 3626 3219643 - 3219633 - gf 83 -5.4 -5.1925 | TGACAAGGCAAAAAA TCTG GTG CAGA ACTGTATCAACTGCG hdrD3 3218557 - 3220707 + | HdrD3 TERM 3627 3221258 - 3221276 + GT 76 -5.8 -4.63479 | CATCAACTTCTGGAT CGGTGCGG TCA CGGCCCCG TTTTGCTTTCTGGTC HRM2_28340 3220650 - 3221606 + | putative amino acid metabolite efflux pump (permease) TERM 3628 3221731 - 3221686 - T 82 -3.4 -5.44119 | gap 3, overlap 3221675 3221692 3221693 3221729 GTCATGGTAAAAAAA CCA--GAAGTTG-ACGTCGTCCC CAT GGGACGACGTCCAAACGCAATGG GGTGAAACGAAGAAA TERM 3629 3221722 - 3221692 - T 100 -14 -3.86495 | overlap 3221686 3221693 GTAAAAAAACCAGAA GTTGACGTCGTCCC CAT GGGACGACGTCCAA ACGCAATGGGGTGAA TERM 3630 3221721 - 3221693 - T 100 -17.5 -2.9027 | overlap 3221692 3221686 TAAAAAAACCAGAAG TTGACGTCGTCCC CAT GGGACGACGTCCA AACGCAATGGGGTGA TERM 3631 3221790 - 3221815 + T 87 -5.3 -5.52986 | opp_overlap 3221791 3221793, overlap 3221791 ACGACCGCCATATAG ACATCTGAGCC CTGG GGCTCAGGCGC TTTTTTTAATAGGCT TERM 3632 3221791 - 3221814 + T 78 -8.8 -3.90707 | opp_overlap 3221791 3221793, overlap 3221790 CGACCGCCATATAGA CATCTGAGCC CTGG GGCTCAGGCG CTTTTTTTAATAGGC ribB 3222461 - 3221808 - | RibB TERM 3633 3222627 - 3222600 - H 71 -8.6 -3.50047 | opp_overlap 3222600 GGCACAAATCGACAA CTATCTGCATTT AAAA AAATGCAAACAG CCTTTTGTTCTCTCC HRM2_28360 3222632 - 3222850 + | hypothetical protein HRM2_28370 3223501 - 3222968 - | hypothetical protein HRM2_28380 3223567 - 3223791 + | hypothetical protein TERM 3634 3224904 - 3224888 - g 74 -6.6 -4.36914 | opp_overlap 3224887 TCCTTGTGGACAAAA TCGAAC AGGTG GTTCGA CTCATTCGATCCAAA HRM2_28390 3224032 - 3225510 + | putative ATPase family protein TERM 3635 3225886 - 3225923 + T 71 -9.7 -2.69471 | overlap 3225912 TGGCGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCATGCCG GTTATATGAAACTCG TERM 3636 3225912 - 3225924 + T 80 -10.5 -3.49475 | overlap 3225886 GAGCCATACCTCGCT CCGGC CAT GCCGG TTATATGAAACTCGC HRM2_28400 3226965 - 3226501 - | hypothetical protein TERM 3637 3226679 - 3226700 + g 70 -2.3 -5.04987 | opp_overlap 3226682, overlap 3226669 3226668 CGCTGGGTCAAGAAA TAATCACTG ATCG TAGTGATGA TTTTTTGAGCATATT HRM2_28410 3227376 - 3227170 - | hypothetical protein TERM 3638 3227276 - 3227260 - G 76 -7.9 -4.31835 | AATCGCCAGAATAAA TCCAGCC AAA GGCAGGA GGGTAAAGCCGATTA HRM2_28420 3228848 - 3227529 - | Fe-S oxidoreductase family protein (selenocysteine protein) HRM2_28430 3228886 - 3229017 + | hypothetical protein TERM 3639 3229907 - 3229881 - g 76 -11.6 -3.33696 | GGGCGGGGGAATCAA TCGCCAGGGA CACCTGC CCCCTGGCGA TTGCCCTTGACAAAT HRM2_28440 3229247 - 3229951 + | hypothetical protein alsT 3231347 - 3229974 - | AlsT TERM 3640 3230461 - 3230428 - G 91 -4.5 -5.64006 | opp_overlap 3230453 ATCGAATCAAAAAAA GTGCCGGTCATGG CGATCAGC CCCTGACGGACAC ATGAGTTTGTCTTGG TERM 3641 3230885 - 3230871 - G 76 -2.8 -5.10029 | overlap 3230861 ACCAATGCCAAAAAA GGCA ACCCCAA TGCC AAACAGGGCAAAGAT TERM 3642 3231639 - 3231669 + r 73 -9.8 -2.98986 | TTTACCTCTTCGGTG CCTTTTCAGTGGTT GCA AACCACGGAAAAGA TCTCTCCTGTCATGT TERM 3643 3231687 - 3231705 + r 77 -3.8 -5.24531 | overlap 3231688 TCTCCTGTCATGTTC ATCCGAGT TTT ATTCGGAA TTTTTTCTACACCCT guaD 3233071 - 3231812 - | GuaD TERM 3644 3232804 - 3232827 + g 74 -11.8 -2.73364 | gap 1, opp_overlap 3232801 CAAAGGTATAATCTC CCAGCCAG-TC CAG GAGCTGGCTGG TCATTCCCATGCCGC HRM2_28470 3233577 - 3233071 - | hypothetical protein TERM 3645 3233580 - 3233594 + r 82 -3.4 -5.42259 | opp_overlap 3233574 3233572 3233570, overlap 3233570 CAAACCATACCATGG GTGCCC ATG GAGCGC TTTTTTTAACGATGG TERM 3646 3233676 - 3233715 + r 100 -10.6 -5.4251 | overlap 3233677 GAGGCGTTTCATCAT TCGTTGTGGCCGGAGCCA TACC TCGCTCCGGCCGTGCCGG TTTTTTATATGTAAC TERM 3647 3233677 - 3233714 + r 100 -11.9 -3.84422 | overlap 3233676 AGGCGTTTCATCATT CGTTGTGGCCGGAGCCA TACC TCGCTCCGGCCGTGCCG GTTTTTTATATGTAA HRM2_28480 3235351 - 3234095 - | transposase (IS111A/IS1328/IS1533 family protein) TERM 3648 3234314 - 3234331 + g 86 -2.7 -5.5604 | gap 1 CAGTTTGTAATATTT GGC-CTTG TAA TAAGAGCC TTTTTTCTTGATTGC TERM 3649 3234708 - 3234720 + g 100 -5.5 -5.7946 | overlap 3234709 CCATTAAGGCTTTTA TGCAG TTC CTGCG TTTTTTTCTTAAGGC HRM2_28490 3235928 - 3235836 - | hypothetical protein TERM 3650 3236022 - 3236006 - H 78 -7.3 -4.47786 | opp_overlap 3236006 AACCATTCAAACAAA CAATTGG AAA CCAACTG TCGTTTATGGTTATA TERM 3651 3236105 - 3236115 + G 93 -4 -5.73339 | AAAGGTTTTGTGGTG GTAA TGG TTAC TTTTTTTATGGTTCT pstS5 3236069 - 3236914 + | PstS5 TERM 3652 3237289 - 3237306 + G 80 -9.9 -3.99324 | ATTCCAACGGTCATC TACGCCT TTGC AGGCGTA TTTCTACTGGTGCCG pstC3 3236917 - 3237813 + | PstC3 TERM 3653 3238108 - 3238122 + G 84 -2.1 -5.64421 | CAGCAACGCCTTTAC CCGAA GCATA TTTGG TTTTTTGTTTGACCT pstA3 3237806 - 3238687 + | PstA3 pstB3 3238702 - 3239400 + | PstB3 TERM 3654 3239464 - 3239453 - f 73 -7.2 -4.21275 | overlap 3239446 TTAACTGACTGAAAA CCCG TTTT CGGG CGGCTCGAAGAGGAG HRM2_28540 3239636 - 3240454 + | hypothetical protein TERM 3655 3240579 - 3240544 - g 89 -14.6 -3.53012 | opp_overlap 3240570, overlap 3240545 CTGTGGGTCTTGAAA CGGCCGGGGCCGCAGA CACC CCTTCAGCCCCGGCCC CTGTCCGGGCTGTCA TERM 3656 3240578 - 3240545 - g 100 -18.1 -2.71712 | opp_overlap 3240570, overlap 3240544 TGTGGGTCTTGAAAC GGCCGGGGCCGCAGA CACC CCTTCAGCCCCGGCC CCTGTCCGGGCTGTC ppiB1 3240477 - 3241094 + | PpiB1 HRM2_28560 3243651 - 3241135 - | hypothetical protein TERM 3657 3242221 - 3242247 + g 72 -10.1 -3.34895 | AGCCCTGGCCTCAAC GCCATGGGTGG ATAAA CCAGCCGTGGC TTCCTTGAACGTGGG TERM 3658 3242932 - 3242884 - G 80 -9.6 -4.07885 | gap 1, opp_overlap 3242898, overlap 3242885 CATGGGGCTTGAAAA TTCCAGGGC-GGACAGGGACATC GTCC AATTTGCCTGCCCTGCCCTGGAC AGGACAAGGTCGGAC TERM 3659 3242931 - 3242885 - G 79 -13.1 -3.04517 | gap 1, opp_overlap 3242898, overlap 3242884 ATGGGGCTTGAAAAT TCCAGGGC-GGACAGGGACATC GTCC AATTTGCCTGCCCTGCCCTGGA CAGGACAAGGTCGGA TERM 3660 3242974 - 3242964 - G 70 -8.2 -3.65812 | GTCCCTTTAAGACAA CGCC AGG GGCG ACAAGGTCAAGAACG TERM 3661 3243262 - 3243278 + g 76 -3 -5.07107 | gap 1, opp_overlap 3243256, overlap 3243256 GTCAAGGGACGGCGC CGAC-GA TGTT TCAGTCG TTTTTTGAGCATTTA HRM2_28570 3244615 - 3243641 - | hypothetical protein TERM 3662 3244306 - 3244289 - G 78 -4.1 -5.18371 | gap 1, overlap 3244290 GCTCAGAAAATAAAA TCCC-ACG AAC CGCAGGGA GCCGAAATAATTTTC HRM2_28580 3245433 - 3244612 - | hypothetical protein dppF1 3246455 - 3245448 - | DppF1 TERM 3663 3245837 - 3245817 - G 71 -7.6 -4.03413 | opp_overlap 3245817 ATCGTGGGAGATAAA CAGATAGG TCAGC CCCATCTG TTTCTGGAGCGTCAA TERM 3664 3246005 - 3246025 + g 70 -8.9 -3.53012 | GAAACCGCTCAAGGG CTCTGGGCC CCA GGCCCACGG TTTCAAGCAACCGGG TERM 3665 3246264 - 3246277 + g 73 -5.9 -4.56597 | opp_overlap 3246253 TAACCCCATGATGCA CCGCC CAAG GGTGG TTTTTCCGCAGCCCG dppD2 3247438 - 3246455 - | DppD2 dppE 3249321 - 3247435 - | DppE TERM 3666 3249213 - 3249225 + gH 100 -6.9 -5.28778 | overlap 3249211 CTGAAGGGACCTTTG GTGGG TCA CCCGC TTTTTTATGAGTGCT HRM2_28620 3249284 - 3249502 + | hypothetical protein motA2 3249575 - 3250345 + | MotA2 TERM 3667 3250434 - 3250444 + GF 84 -2.4 -5.55664 | TGCGGACCTCATGAC CCTG CTT CTGG TTTTTTTCATACTGC motB2 3250351 - 3251085 + | MotB2 HRM2_28650 3251054 - 3251452 + | hypothetical protein dinP 3251449 - 3252603 + | DinP HRM2_28670 3252739 - 3252933 + | hypothetical protein HRM2_28680 3252946 - 3253512 + | hypothetical protein TERM 3668 3253949 - 3253965 + G 74 -7.9 -4.18197 | opp_overlap 3253948 3253947 TTACAAGCACAAAGG GGGGCGA TCT TCACCCC TTTTCCCTGCGGCCT TERM 3669 3254503 - 3254534 + G 95 -11.6 -4.58663 | gap 1, opp_overlap 3254494 3254492 ACAAGAGCCCTGATG GTCATGGCCTG-CCT CAT GGGACTGGCCATGAC TTTTTCAGGAATAAT TERM 3670 3254567 - 3254580 + G 70 -4.5 -4.73682 | opp_overlap 3254567 TCGTCTTCAAACAGA TTCGG AGGG CCGGA TTTTATCTTCTGGCA TERM 3671 3255032 - 3255002 - g 80 -4.6 -5.1848 | AAGGAATGCAAAAAA GCGCATCTTGTACC GGC GAGACAAGGCACGC TTTTACCATTGAGCT TERM 3672 3255860 - 3255895 + G 70 -2.5 -4.99972 | gap 1, opp_overlap 3255861, overlap 3255861 3255861 AAGAATTGGGGGGAA AGG-TCCATGTCCTGA GTGAG TCTGGACAGGGAACCC TTTTTACTCTTTTCT faa 3253558 - 3255990 + | Faa HRM2_28700 3257731 - 3255947 - | two-component sensory box histidine kinase/response regulator protein TERM 3673 3256084 - 3256094 + g 71 -6.8 -4.13654 | opp_overlap 3256080, overlap 3256080 TGGTTTCAAACGAGG CCAG GGA CTGG TTTCTCATTTCCACC TERM 3674 3256994 - 3257004 + g 76 -8.2 -4.26344 | CCGTGCAAAGCTTGT CCGG TTA CCGG TTTTGATGCCCGTGT HRM2_28710 3258518 - 3257865 - | hypothetical protein acsA1 3258961 - 3260994 + | AcsA1 TERM 3675 3261005 - 3261036 + F 86 -10.2 -3.786 | gap 1, opp_overlap 3261002, overlap 3261006 AATAACACTCAACTG TCCGGCAACAGCGGT CAC ACC-TTGTTGCCGGC TTTAAACTTTTATCC TERM 3676 3261006 - 3261035 + F 93 -13.7 -2.86437 | gap 1, opp_overlap 3261002, overlap 3261005 ATAACACTCAACTGT CCGGCAACAGCGGT CAC ACC-TTGTTGCCGG CTTTAAACTTTTATC acsA2 3261071 - 3262978 + | AcsA2 TERM 3677 3263080 - 3263043 - g 85 -7.8 -4.77896 | gap 2 CAAGCAATCGAAAAA GTCCCGGCACAGGCATGG ATAA CCA--CCTTTGCCGGAAC TGCCATAAATCTTTG TERM 3678 3263715 - 3263704 - g 86 -5.8 -5.08824 | GTGCCACGGAAAAAA CCCA TAAC TGGG AAGCGGCCGATGTTC oxlT 3263019 - 3264308 + | OxlT TERM 3679 3264356 - 3264317 - f 86 -11.5 -3.25316 | gap 1, opp_overlap 3264315, overlap 3264315 3264318 CGGATAGAGAACACA CGTTTCCGGGGCATGGCA TCACC TGTCATGCCCCGGAAT-G CCCCTCCTCTTAGAA TERM 3680 3264356 - 3264318 - f 79 -11.7 -2.54707 | opp_overlap 3264315, overlap 3264317 3264315 GGATAGAGAACACAC GTTTCCGGGGCATGGCA TCACC TGTCATGCCCCGGAATG CCCCTCCTCTTAGAA HRM2_28750 3264393 - 3265052 + | hypothetical protein HRM2_28760 3267134 - 3265086 - | sensory box histidine kinase/response regulator protein vdcC 3268989 - 3267157 - | VdcC TERM 3681 3268868 - 3268851 - G 82 -6.9 -4.86731 | overlap 3268852 CCCGTTCAAATAAAA TGGCAGG ACCG CCTGCCT CAAACACACGCCTGT TERM 3682 3268867 - 3268852 - G 77 -10.4 -3.51557 | overlap 3268851 CCGTTCAAATAAAAT GGCAGG ACCG CCTGCC TCAAACACACGCCTG HRM2_28780 3269498 - 3268986 - | FMN-binding pyridoxamine 5'-phosphate oxidase-related protein TERM 3683 3269382 - 3269346 - GR 100 -2.8 -6.34424 | overlap 3269348 3269350 CCGGTAAAAAAAAAA CACCGGTGCGGACCAG CACCC CTGATCAGACCCGGTT GCAAGTGTCATCACC TERM 3684 3269380 - 3269348 - GR 76 -5.4 -4.82685 | overlap 3269346 3269350 GGTAAAAAAAAAACA CCGGTGCGGACCAG CACCC CTGATCAGACCCGG TTGCAAGTGTCATCA HRM2_28790 3270768 - 3269452 - | putative Zn-dependent metalloprotease (TPR repeat protein) HRM2_28800 3271051 - 3270773 - | hypothetical protein TERM 3685 3271913 - 3271902 - g 70 -2.2 -5.02074 | CCATGGGGCAAAAAA CACA GGCA TGCG TCTCAGGTTCATATT TERM 3686 3272626 - 3272636 + G 76 -3.2 -5.1861 | ATGACAGGACTGAGC CTTG GAA CAGG TTTTTTCCTCGTAAA HRM2_28810 3271255 - 3272838 + | hypothetical protein acuC 3272963 - 3273913 + | AcuC acuB2 3273965 - 3274654 + | AcuB2 dnaK2 3276010 - 3274721 - | DnaK2 TERM 3687 3274755 - 3274788 + g 73 -5.1 -4.63089 | opp_overlap 3274747 3274748, overlap 3274759 GCAGAAAGCCCCAGG CCGTGGCCCACACTT AAAA AAGCGTCGGCCTGGG TTATTTTTTCGGGTC HRM2_28850 3276972 - 3276160 - | putative CO dehydrogenase/acetyl-CoA synthase (Fe-S cluster family protein) TERM 3688 3276451 - 3276462 + g 73 -5.8 -4.58283 | GTAGGTATCGGCAAC CCGT TTCA ACGG TTTTTCACAACGTTG TERM 3689 3277251 - 3277205 - R 76 -10.1 -3.35679 | gap 1, overlap 3277207 3277241 GGGCTGGACGTACAA GATGCCGGGCATGGGGCTGTAG TCGC CTACCGCAA-ATGCCCGGCAAC GCGGCAGATCCGGTC TERM 3690 3277249 - 3277207 - R 86 -11.3 -3.24924 | gap 1, overlap 3277205 3277241 GCTGGACGTACAAGA TGCCGGGCATGGGGCTGTAG TCGC CTACCGCAA-ATGCCCGGCA ACGCGGCAGATCCGG HRM2_28860 3278188 - 3277325 - | putative oxidoreductase family protein HRM2_28870 3278849 - 3278232 - | putative SAM-dependent methyltransferase HRM2_28880 3281836 - 3278900 - | ATP-dependent DEAD/DEAH box helicase family protein TERM 3691 3281611 - 3281635 + g 73 -2.8 -4.96848 | TACCGCTTGCCGTGG GGGTTGCA ATAACGGTG TGCACCCC TTTTTCTATCAACGC argA1 3282690 - 3281833 - | ArgA1 TERM 3692 3281874 - 3281888 + g 72 -10 -3.40878 | overlap 3281872 AAACAATCAGGTCAA CGGCAA GCT TTGCCG TCTTGTTGGCCTGGT TERM 3693 3282642 - 3282628 - G 70 -11.4 -2.69319 | overlap 3282627 AAGGGCCGATACAAG GCCCGT GTA ACGGGC AGCAGCCGGTCCCAT TERM 3694 3283119 - 3283134 + G 91 -4.7 -5.60993 | overlap 3283104 3283104 GGCCAGGCCTTGAAC CAGGA GCCAGG TCCTG TTTTTTTCTCAAGCC HRM2_28900 3282921 - 3283604 + | hypothetical protein HRM2_28910 3283660 - 3284511 + | putative metal dependent hydrolase HRM2_28920 3285490 - 3284513 - | hypothetical protein TERM 3695 3284611 - 3284628 + g 74 -6.9 -4.30014 | opp_overlap 3284607 3284610 AATCATCCAAAGATT CCGTCTG AATC CAGTCGG TTTTACGTTGCTCCC TERM 3696 3284706 - 3284687 - G 70 -9.2 -3.54424 | GCTGACTTCGGCAAA CCCGGCCC GCTT GAGCCAGG ATTCCATCACCTTGA TERM 3697 3285036 - 3285052 + g 73 -5.8 -4.56775 | TGCTGGGGCTCAAGT CCTAGG ACCAG CCTGGG TTTTTGGGAAGCCAT HRM2_28930 3286238 - 3285495 - | SAM-dependent methyltransferase family protein moeB2 3287042 - 3286311 - | MoeB2 TERM 3698 3286553 - 3286569 + g 71 -10.9 -3.08312 | opp_overlap 3286541 3286553, overlap 3286555 3286566 AAAGGGTGGTGGAAA GATCACC CGT GGTGATC TTGGATGGATCCATT TERM 3699 3286569 - 3286553 - G 77 -10.9 -3.5394 | opp_overlap 3286553 3286555 3286566, overlap 3286541 AAAGGGTGGTGGAAA GATCACC CGT GGTGATC TTGGATGGATCCATT TERM 3700 3287261 - 3287242 - R 86 -11.4 -3.28712 | GTGCTTCTGGGATAA GGCCGGAT AATG ACCCGGCC GACCGTTCCAGGAAA HRM2_28950 3287473 - 3287291 - | hypothetical protein TERM 3701 3287582 - 3287558 - R 100 -13.6 -4.96848 | CGGTTGATATAAAAA GAGCCCCCCA AAATA TGAGGGGCTC CAGAACATATTTACT HRM2_28960 3288096 - 3287647 - | hypothetical protein TERM 3702 3288114 - 3288102 - R 89 -10.5 -4.0641 | overlap 3288103 CCTTATCCATATAAA CCGGC ACG GCCGG AGCGAGTCATGGCTC TERM 3703 3288140 - 3288103 - R 73 -9.7 -3.03525 | overlap 3288102 CTTATCCATATAAAC CGGCACGGCCGGAGCGA GTCA TGGCTCCGGCCTCAACG AATGATGAAACGCCT HRM2_28970 3291428 - 3288531 - | two-component fusion protein (N:response regulator receiver (CheY-like)-C:PALM domain, HD hydrolase domain and Zn-ribbon domain) TERM 3704 3288648 - 3288663 + g 83 -5.4 -5.15117 | AGGGCCCACAACCTG GGTCAT AGCC ATGGCC TTTTTTGAAATTTTC TERM 3705 3288878 - 3288905 + g 78 -6.3 -4.8543 | overlap 3288880 CAAGTTCTTTTTTCT CCTTCTGGAGG GCAATA CCTTCAGAATG TTTTTCTGGCAGTTC TERM 3706 3288880 - 3288903 + g 71 -7.5 -4.04397 | overlap 3288878 AGTTCTTTTTTCTCC TTCTGGAGG GCAATA CCTTCAGAA TGTTTTTCTGGCAGT TERM 3707 3289545 - 3289535 - G 70 -3.2 -4.87665 | TGCCATCGATAAAAA GATC CTG GACC ACGGAAACAACTCCC TERM 3708 3289942 - 3289929 - G 79 -6.7 -4.59853 | TGAATGTTTTAAAAA TCCTG ACAG CAGGA GATCATCAACAACGC TERM 3709 3290324 - 3290341 + g 71 -7 -4.2558 | opp_overlap 3290324 3290323 3290326 GGGCCGGTGTTAAAG CACGGT CCTGCA ACCGTG TTTTAATCAGGGATC HRM2_28980 3292171 - 3291440 - | putative response regulator receiver (CheY-like) modulated transcriptional activator kefA 3294726 - 3292189 - | KefA TERM 3710 3294234 - 3294263 + g 83 -2.9 -5.4505 | gap 1, overlap 3294235 3294238 CCACCGCCGTCCGCA CCTCGCCTGAGTAG GCT TTATTCAGG-GAGA TTTTTTCTTCCACCC glgA2 3296251 - 3294791 - | GlgA2 TERM 3711 3295148 - 3295136 - G 70 -3.3 -4.77036 | CGGCATCATGAAAAA GTCAG ATC CTGCC TCAATCAGATGGGAC TERM 3712 3296214 - 3296190 - G 70 -9.3 -3.53091 | opp_overlap 3296190 AGGGCCGCTCCGAAA TCGGCAAGACC GCC GGTCTTGACAA TCCCGTCCATCTCCG glgC3 3297483 - 3296251 - | GlgC3 TERM 3713 3297259 - 3297245 - G 86 -8.6 -4.71828 | ATGGGATCAATAAAA TGGTCT GTC AGACCA GAGATGCGCCATGCC HRM2_29020 3298336 - 3297623 - | putative HTH-type transcriptional regulator TERM 3714 3297724 - 3297739 + g 91 -3.2 -5.72118 | TGATATGAAAGGTTA GGGC CTTGTCGA GCCC TTTTTTATCTTTTTT TERM 3715 3299352 - 3299324 - g 81 -12.5 -3.18383 | ATTCCCAGGCAGGAA CATCCATCCAGTC CAT GGCTGAATGGATG GCAGCCCCGGTTGTG TERM 3716 3299691 - 3299678 - g 70 -2.3 -4.98531 | overlap 3299680 3299689 TCCTCAAAGGAAAAA CCGCC CACA GACAG GCATCCGACTGGGTC ilvB 3298399 - 3300369 + | IlvB TERM 3717 3301321 - 3301300 - g 73 -2.9 -4.93898 | overlap 3301291 3301303 ACACCATCACAAAAA TCATCTGTG AAAA CACGGAGGA ACTCTATAAAATCAA TERM 3718 3301365 - 3301352 - g 78 -3.9 -5.06414 | overlap 3301359 CCCGGCCAACAAAAA TTTCA AACC TGAAA CGGGCTGGAAAAACA HRM2_29040 3300417 - 3301442 + | TRAP transporter, solute receptor (TAXI family protein) TERM 3719 3301508 - 3301475 - f 78 -10.2 -3.25823 | opp_overlap 3301475 TGTCTTGTAGATTAA CCCGGGCAGAGCAC CTGGTT GTGCCCTGCCCCCG AACCTGGAGAAGTGT TERM 3720 3301717 - 3301703 - g 86 -2.8 -5.60993 | GCTTCCACAAAAAAA CACTAT AAA AAAGTG GGCATCTTTAACTGG TERM 3721 3302610 - 3302630 + G 71 -5.3 -4.56153 | ATTCACCCTTTATGG CGGCCAATG TGG CAATTGCCG TTGTTTTTCTGATCA TERM 3722 3302686 - 3302660 - g 79 -5.1 -5.00884 | gap 1, opp_overlap 3302660 3302664, overlap 3302664 AGTTTTCTTAAAAAA GAGACCCGGATG ACGC CCTCCAGG-CTC TTTGAAACCCTCCGC HRM2_29050 3301526 - 3303439 + | TRAP transporter, 4TM/12TM fusion protein TERM 3723 3303612 - 3303595 - g 83 -3.3 -5.47218 | overlap 3303596 3303598 CCTGATCGAAAAAAA CGACCTG GCCT CAGGCAG TTCAGGTGCCTGTGA TERM 3724 3303829 - 3303815 - g 91 -11.4 -4.1421 | TATACCAAAGAACAA CAGGCC AAC GGCCTG GATGTCCGGCTCCTC TERM 3725 3304304 - 3304324 + G 90 -13.3 -3.95219 | overlap 3304279 GACAATGGCAACCTG CTCCTGGGT TCC ACCCGGGAG TTTGTCGGATTTAAC TERM 3726 3304465 - 3304498 + G 100 -9.5 -4.72272 | gap 1 TACCCCTGACGGACT GCCGATTCTGGGTTCG GTC CGATCCCTGGA-CGGC TTTTTCATGGCGGCC soxB2 3303485 - 3304657 + | SoxB2 soxA2 3304650 - 3305003 + | SoxA2 TERM 3727 3305204 - 3305194 - g 74 -8.2 -4.10552 | opp_overlap 3305194 3305191, overlap 3305190 CCGGATGAAATCAAA GGGC TTT GCCC TGATTGAATCCATCA TERM 3728 3305253 - 3305265 + G 70 -9.1 -3.63744 | overlap 3305251 ACTGGATCACCCAGG CCCAG GTA CTGGG TATTTTCAAGGAAAG TERM 3729 3305626 - 3305597 - g 70 -2.1 -4.91852 | gap 1, overlap 3305598 3305621 TCCATGAAAAAGAAA CTGGCCTTTGTTCC CCT GGT-CAAAGACCAC TGGCCCAAACTCGTG TERM 3730 3305811 - 3305830 + G 78 -10 -3.87641 | gap 1, opp_overlap 3305797 3305798, overlap 3305811 AGTGCCCGGCCGACG CCC-TGGCC ATT GGCCACGGG TTTGTCCCCAATATT TERM 3731 3305811 - 3305829 + G 70 -10.2 -2.92102 | opp_overlap 3305797 3305798, overlap 3305811 AGTGCCCGGCCGACG CCCTGGCC ATT GGCCACGG GTTTGTCCCCAATAT ooxA 3305000 - 3306439 + | OoxA TERM 3732 3306893 - 3306882 - g 78 -2.2 -5.2189 | TCAATCATCAAAAAA GGTC AAAA AACC GGCATCATCACCGCC HRM2_29090 3306528 - 3307286 + | hypothetical protein TERM 3733 3307296 - 3307315 + F 76 -2.8 -5.34309 | gap 1, overlap 3307294 3307300 GTCTGAGGTATGGCA GGAC-GGAC CAT GTCCTGTGC TTTTTCTTTCATGGT TERM 3734 3307707 - 3307693 - g 76 -4.2 -5.00616 | GCCTTTGCCAAAAAA GCCG ATAAAGA CGGC CTGCCACAAATTTCA rbr3 3307612 - 3308112 + | Rbr3 TERM 3735 3308161 - 3308123 - f 100 -12.5 -3.95007 | overlap 3308116 3308124 CATAGAAACCAAGAA TGCCCCGTGGCC-TGGCTG AAC CTGCCATGGCCACGGGA-A CCCCACCCTTGGCCC TERM 3736 3308161 - 3308124 - f 100 -14.1 -2.9592 | gap 1, overlap 3308123 3308116 ATAGAAACCAAGAAT GCCCCGTGGCC-TGGCTG AAC CTGCCATGGCCACGGGAA CCCCACCCTTGGCCC HRM2_29110 3308320 - 3308817 + | acetyltransferase (GNAT family protein) TERM 3737 3309032 - 3309015 - g 79 -6.9 -4.66609 | overlap 3309017 CAGGCCATGGAAAAA CGCCTGG CCCA CCAGGTG TACGGGTATACCATG patB 3308832 - 3310037 + | PatB HRM2_29130 3311139 - 3310120 - | hypothetical protein TERM 3738 3311285 - 3311298 + H 70 -5.3 -4.42062 | CTGGGTGGGTGCGTT TGCTT AACA AAGCA TTTATTTCCGCCCTC TERM 3739 3311444 - 3311454 + H 95 -2.6 -6.09133 | opp_overlap 3311444 TTTCAAAAAAAAGAT TTAT ACA ATAA TTTTTTTTTAAAATC TERM 3740 3311857 - 3311869 + H 100 -10.5 -4.53303 | TGAAGATACCTCACT CCGGC CGT GCCGG TTTTATATGAAACTC TERM 3741 3312131 - 3312168 + H 71 -9.7 -2.57463 | overlap 3312157 AGGCGTTTCATCATT CGTTGAGGCCGGAGCCA TAAC TCGCTCCGGCCGTGCCG GTTATAAAACAAATT TERM 3742 3312157 - 3312169 + H 78 -10.5 -3.29461 | overlap 3312131 GAGCCATAACTCGCT CCGGC CGT GCCGG TTATAAAACAAATTA HRM2_29140 3312184 - 3312504 + | hypothetical protein HRM2_29150 3312497 - 3312760 + | hypothetical protein HRM2_29170 3315124 - 3313208 - | hypothetical protein HRM2_29160 3312742 - 3313365 + | hypothetical protein TERM 3743 3313397 - 3313371 - GT 73 -3 -5.00616 | overlap 3313372 3313393 GCCTTGTTGAAAAAA TCAACATCCGTG CTG CACAAACCTTGA ACTTCAAAACATTGT TERM 3744 3314279 - 3314256 - GT 85 -3.8 -5.40474 | ACTGTTTTAAAAAAA GGGGCG CTGGACATGATT CGCCCC AACAATTCCCTTTCA TERM 3745 3315077 - 3315065 - GT 78 -10.5 -3.28712 | CCCTCTTTTGCACAA CCGGC ACA GCCGG AGCGGGGTGTGGGCG asd 3316283 - 3315177 - | Asd TERM 3746 3316382 - 3316372 - H 70 -5.4 -4.45083 | CTTATACCGACAAAA CCTT TTT AAGG TCAATACCATATTTT TERM 3747 3316412 - 3316424 + H 71 -9.1 -3.36273 | TTCCATGGAGTTTCC CAGGG TGC CCCTG TTGATGTTCAAAAAC TERM 3748 3316662 - 3316648 - g 78 -2.1 -5.2422 | AACCAGATCAAAAAA CTCAG GATTG CTAAG GAAAAGGCGGAAATC prkA1 3316588 - 3317400 + | PrkA1 HRM2_29200 3319720 - 3317393 - | sensory box histidine kinase/response regulator protein TERM 3749 3319683 - 3319702 + g 78 -2.1 -5.29782 | TCTGCAGGCGTCTCA TCGCTTG CCATCC CAAGGGA TTTTTTATCCATCTC HRM2_29210 3321370 - 3319721 - | SpoVR-like family protein TERM 3750 3319988 - 3319998 + g 91 -6.8 -5.1861 | opp_overlap 3319970, overlap 3319970 GACCAGGTAAAGGTC CCCT TTC AGGG TTTTTTCATGGTCCA TERM 3751 3320363 - 3320341 - G 82 -4 -5.26918 | overlap 3320342 ATATGTGATAAAAAA GCCTCATGCC CAG GGCGTAAGGA TTAAGGCCCACCTTG TERM 3752 3320564 - 3320575 + g 70 -2.2 -5.00884 | AACCGACTTCATCCA GGTG TTTT CATC TTTTTTCAGGAACGT TERM 3753 3320620 - 3320644 + g 74 -4.1 -4.98911 | overlap 3320621 TGTACTGCATGACGT CGGGCCGGGGA TTG TCCTTTGCCCC TTTCTTTTTCTGGTA HRM2_29220 3322553 - 3321393 - | hypothetical protein TERM 3754 3321853 - 3321824 - G 77 -12.3 -3.03159 | TGAACCGTGTCAACA CCTGGCGTTTATA CTGG TATAAAAGCCAGG AATAAATCATCACAT TERM 3755 3321946 - 3321933 - G 80 -3.1 -5.24129 | gap 1, opp_overlap 3321934 3321940, overlap 3321935 GTCCCGGAGAAAAAA CACCAG TGC CTGG-G ATTCGTAGGCCTTTT TERM 3756 3321945 - 3321935 - G 71 -6.8 -4.25873 | opp_overlap 3321934 3321940, overlap 3321933 CCCGGAGAAAAAACA CCAG TGC CTGG GATTCGTAGGCCTTT prkA2 3324617 - 3322554 - | PrkA2 TERM 3757 3323726 - 3323736 + g 100 -6.8 -5.34365 | overlap 3323721 CCCCCAGGTAGACCT GGAC AAG GTCC TTTTTGTTCTTGTAG TERM 3758 3325461 - 3325431 - g 85 -7.6 -4.89477 | GGCCGAAGAACAAAA GGCCCTTGCCAT GAATGCA ATTGCAAAGGCC CTCAACGGAATGAAT HRM2_29240 3324994 - 3326385 + | hypothetical protein HRM2_29250 3327552 - 3326614 - | ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic binding component TERM 3759 3327634 - 3327610 - H 74 -10.1 -3.19668 | opp_overlap 3327609, overlap 3327631 CAGCATTCAATTTAA CCCCTATAG GTCGCTA CTATAGGGG ATGTCTCCCGACCGT TERM 3760 3328281 - 3328265 - g 73 -5.1 -4.62336 | AGCGCAGTTGAAAAA CTTGACA ACG TGGCAAG GCAGGTCATGGACCT TERM 3761 3328285 - 3328295 + G 76 -6.8 -4.57837 | opp_overlap 3328285, overlap 3328294 CAACGTGGCAAGGCA GGTC ATG GACC TTTTTCAAAAGGTGT HRM2_29260 3327875 - 3328510 + | HTH-type transcriptional regulator (TetR-family protein) HRM2_29270 3329279 - 3328530 - | enoyl-CoA hydratase/isomerase family protein fabG7 3330199 - 3329441 - | FabG7 TERM 3762 3330134 - 3330119 - G 70 -9 -3.5393 | ACCATGTTCGGCAAA GGCCAT GGCC ATGGCC CGACCAATGCCCCGG HRM2_29290 3330317 - 3330706 + | hypothetical protein TERM 3763 3331095 - 3331073 - gT 100 -9.2 -5.86965 | opp_overlap 3331076, overlap 3331081 ATGGATCAAAAAAAA CAAGGAAATC AAG GATGTCCTTG TCACGGGCGGAGACC TERM 3764 3331255 - 3331225 - gT 76 -11.2 -2.62263 | opp_overlap 3331225 ACCTTCCCCAGAGGA TCACCCAGGACCTC ATG GAAATCCTTGGTGA TTTCCACAGGGTTCC TERM 3765 3331573 - 3331561 - gT 80 -10.5 -3.49475 | TCCAGGGCCATACAA CGGGC CTT GCCCG CCCGACCTATGTCAT TERM 3766 3331623 - 3331609 - gT 76 -5.7 -4.6856 | CAAACATCGGAAAAA TTCCC CTCAT GGGAA ATGACTACATGATTG HRM2_29300 3330639 - 3331718 + | YodO ispD 3332424 - 3331687 - | IspD HRM2_29320 3333738 - 3332434 - | hypothetical protein HRM2_29330 3334950 - 3333766 - | hypothetical protein TERM 3767 3334383 - 3334393 + g 86 -6.8 -5.00884 | TCATGGTGTACTTCA GGGT TGC ACCC TTTTTTACAAAAAAT TERM 3768 3334611 - 3334600 - G 85 -7.2 -4.8622 | GCTTCGAATGAAAAA CCCC TGGA GGGG CGCATTTCTGGTGGA sufC 3335693 - 3334938 - | SufC TERM 3769 3335569 - 3335548 - G 73 -5.2 -4.59773 | gap 1, overlap 3335549 TTGTACCCGGAAAAA CCCATGATG GTCAT CATCA-GGG ACGTCTTGCCAGACC TERM 3770 3335984 - 3336013 + r 100 -13.5 -3.24076 | overlap 3335982 3335985 CGCACCGTTTCACCC TTACCGGGCACCC CAAG GGGTGCCCGGCGG TCTATTCTCTGCTGC TERM 3771 3335985 - 3336012 + r 100 -14.8 -2.53964 | overlap 3335984 3335982 GCACCGTTTCACCCT TACCGGGCACCC CAAG GGGTGCCCGGCG GTCTATTCTCTGCTG HRM2_29350 3336917 - 3336174 - | putative nucleic acid-binding Zn-ribbon protein HRM2_29360 3337782 - 3336970 - | hypothetical protein TERM 3772 3337452 - 3337465 + g 72 -9.5 -3.35774 | CAAAATAATCGTTCA GGCCC TGAT GGGCC TTGTCCAGATTTGTG TERM 3773 3337846 - 3337822 - R 100 -14.4 -5.71295 | AGATAAAAACAAAAA GAGCGTGGTA TCAAG TACCACGCTC CCCGGCAAACTTTTT rpoD 3339934 - 3338078 - | RpoD TERM 3774 3339837 - 3339850 + g 80 -2.3 -5.43866 | opp_overlap 3339839 TTTATTTCGGCATAG GAGAG AGAA CCCTC TTTTTTTCCCCGTTC TERM 3775 3339942 - 3339954 + r 82 -4.8 -5.31855 | opp_overlap 3339942 GCTGCCATAAAAAAT GCCT CCAAA AGGC TTTTTATTATTCATA dnaG9 3341769 - 3339961 - | DnaG9 TERM 3776 3341791 - 3341778 - R 71 -2.3 -5.1615 | overlap 3341779 TTAACATTTAAAAAA GGGTG GCTC CAACC GGGTATTCAATTTAT hisB 3342321 - 3341851 - | HisB TERM 3777 3342582 - 3342599 + G 74 -2.6 -5.1675 | overlap 3342583 CCGTTTGCTTGATCG CGGCAG TGCTCT CTGCCC TTTTTTCATCACTCA HRM2_29410 3342512 - 3342709 + | hypothetical protein TERM 3778 3342738 - 3342727 - f 95 -7.2 -5.55855 | GGGAAAAAAAGAAAA CCCG ATAA CGGG AATGGTGAAACAAAA rimK2 3342740 - 3343261 + | RimK2 mptN 3343270 - 3344526 + | MptN TERM 3779 3344566 - 3344555 - g 74 -2.2 -5.07652 | opp_overlap 3344558, overlap 3344558 TTTCGCAAAATAAAA GATC CATT GACC AATGGTTTGACACAC TERM 3780 3345361 - 3345351 - g 76 -8.2 -4.22652 | opp_overlap 3345351, overlap 3345352 CGACATCATCGAAAA GGGG GCA CCCC TTGCTACCAACACGA aspA 3344533 - 3345612 + | AspA TERM 3781 3345606 - 3345623 + F 85 -4.2 -5.53288 | opp_overlap 3345616 3345620 TGTGGAACCACCCAT GGAATA AAAAGC TATTCC TTTTTTTCCCTTGAA TERM 3782 3345650 - 3345616 - f 71 -2.3 -5.10461 | gap 1, opp_overlap 3345606, overlap 3345620 CCCATGGAATAAAAA GCTATTCCTTTTTTTC CCTT GAAAAAAAGGT-TACC CCTCTTATATTATCC TERM 3783 3346205 - 3346174 - g 91 -11.6 -4.21194 | overlap 3346175 GCCCAGGATCGAAAA GTTGCTGCCAGTGC CACA GCACTTGCAGCAAA GGCAGCTGCTGAAAT TERM 3784 3346204 - 3346175 - g 89 -15.1 -3.12395 | overlap 3346174 CCCAGGATCGAAAAG TTGCTGCCAGTGC CACA GCACTTGCAGCAA AGGCAGCTGCTGAAA HRM2_29450 3345712 - 3346365 + | hypothetical protein TERM 3785 3346968 - 3346980 + T 100 -10.5 -4.32669 | GAGTCATACCTCGCT CCGGC CGT GCCGG TTATTTTATCAGCTT HRM2_29460 3347520 - 3346981 - | putative YcaC-related amidohydrolase pyrD 3348451 - 3347543 - | PyrD HRM2_29480 3351054 - 3348565 - | hypothetical protein TERM 3786 3348707 - 3348687 - G 83 -5.3 -5.18726 | opp_overlap 3348688, overlap 3348688 CGTGGAGAATAAAAA GTTCGGTCG CCT CGTCCGAAT ATCCTGATCGTACCG TERM 3787 3348706 - 3348688 - G 73 -8.8 -3.70512 | opp_overlap 3348688, overlap 3348687 GTGGAGAATAAAAAG TTCGGTCG CCT CGTCCGAA TATCCTGATCGTACC TERM 3788 3348834 - 3348845 + g 78 -5.8 -4.82901 | opp_overlap 3348834 GGATCGAACCAACAA GGGT AAAC ACCC TTTTTCTCCGAAACA TERM 3789 3349607 - 3349623 + g 70 -2.2 -5.01732 | opp_overlap 3349607, overlap 3349585 TTTCGTTCCATGAGA GAGGCA AAGGA TTCCTC TTTTTTGAAGAAATT TERM 3790 3350881 - 3350868 - G 72 -9.5 -3.39595 | CCGAAGTATCCACAA GGGCG TCAC CGCCC TTGACAATCACGTTG HRM2_29490 3352855 - 3351059 - | hypothetical protein TERM 3791 3352753 - 3352770 + g 100 -12.7 -4.19506 | opp_overlap 3352752 3352751 TGGGTGCAGCAAACC GGGCCAG GATC CTGGCCC TTTTCAGGTTGCCGT HRM2_29500 3353862 - 3352864 - | hypothetical protein TERM 3792 3353849 - 3353839 - G 74 -4.6 -4.88736 | opp_overlap 3353841, overlap 3353841 CATGAGGGACAAAAA CCCC GGG GAGG CAAACCTAAACATCT HRM2_29510 3354397 - 3353855 - | hypothetical protein TERM 3793 3354245 - 3354257 + g 76 -4.7 -5.0538 | CATCAGCAGGTTCGT GCCGG GTC CCGAC TTTTTTCGCCTGAGG HRM2_29520 3355276 - 3354398 - | hypothetical protein TERM 3794 3354856 - 3354866 + g 70 -2.4 -5.0133 | opp_overlap 3354846 TCAGACGCCACACAT GGCC CGT GCCC TTTTTTGGGGGGATA TERM 3795 3354925 - 3354908 - G 73 -2.7 -5.00616 | opp_overlap 3354908 CTGGTCTGTAAAAAA GATAACG CCCA CCTTATC GTTGTTTTTAATGGC HRM2_29530 3356256 - 3355282 - | moxR-type regulator protein HRM2_29540 3356999 - 3356385 - | HTH-type transcriptional regulator HRM2_29550 3357469 - 3357071 - | hypothetical protein HRM2_29560 3357468 - 3358484 + | putative arginine kinase (AK) TERM 3796 3358555 - 3358567 + FH 79 -3.4 -5.40072 | TCGTGCGTTTACGGG TAGC TCCTT GCTA TTTTTTTGACCAGAG TERM 3797 3358770 - 3358782 + FH 86 -10.5 -3.8372 | GGCAAAAACCATGCT CCGGC CAT GCCGG TTATGTTATTACCCT TERM 3798 3359824 - 3359814 - g 80 -4.6 -5.08824 | opp_overlap 3359821 TCCTGAGGGAAAAAA CCCC ACT GAGG GACGTGCTCTCCTTT HRM2_29570 3358838 - 3359986 + | ABC-type glycine betaine/proline transport system, ATP-binding protein (ATPase) HRM2_29580 3359983 - 3360318 + | ABC-type glycine betaine/proline transport system, inner membrane permease protein TERM 3799 3360348 - 3360358 + T 73 -5.4 -4.73388 | opp_overlap 3360348, overlap 3360345 TTAACACATTATCAA GACA CCT TGTC TTTTTGATCGGAATT HRM2_29590 3362036 - 3360537 - | transposase (11 DDE domain protein) TERM 3800 3361745 - 3361756 + g 86 -3 -5.61596 | TATCAATTATCTCCG GAAA CGGC TTTC TTTTTTTATCGAAAT HRM2_29600 3362154 - 3362522 + | ABC-type glycine betaine/proline transport system, permease protein HRM2_29610 3362519 - 3363250 + | ABC-type glycine betaine/proline transport system, inner membrane permease protein HRM2_29620 3363395 - 3364306 + | ABC-type glycine betaine/proline transport system, periplasmic glycine betaine/proline-binding protein TERM 3801 3364329 - 3364351 + F 90 -11.3 -3.73224 | opp_overlap 3364321 CCACAGATCTCCGAA GGGGGAAGG CCTTT TCTTCCCCC TTTCCTGGGCACTCA adh2 3364447 - 3365583 + | Adh2 TERM 3802 3365830 - 3365846 + F 71 -4.3 -4.8543 | GGCGTTCTTCCTCCA GGGAGAC CAG GCCTTCC TTTTTATCCAGCTTC TERM 3803 3365976 - 3365955 - f 82 -5.9 -4.9218 | TATCGACGACAAAAA GGATGTC TGTCGGTT GACATCC GGTGAGATGTAGGCA HRM2_29640 3366035 - 3367480 + | sensory box signal transduction histidine kinase TERM 3804 3367859 - 3367830 - T 100 -10.1 -5.95539 | opp_overlap 3367830 TTCCAAACAAAAAAA GTCCTGACCATTA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 3805 3367830 - 3367859 + T 78 -10.1 -3.49475 | opp_overlap 3367830 TTCCAAACAAAAAAA GTCCTGACCATTA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 3806 3368008 - 3368030 + T 74 -10.6 -2.66435 | opp_overlap 3368007, overlap 3368005 AACTTGGCAATATAC GGGACAGATT TCA AATCTGACCC TAATCTGCTGAAAGT TERM 3807 3369721 - 3369737 + T 83 -9.4 -3.93963 | TTGGGCTATCGGCGA GGGGGT TTCTC ACCCCC TTTATCGCTACTCAT TERM 3808 3371340 - 3371322 - T 76 -6.8 -4.56978 | overlap 3371334 TTGTCAAAGAACAAA GAATCAAT TAA ATTGATCC CTCAAAACCGGTTAG TERM 3809 3372222 - 3372211 - T 70 -7.2 -3.85698 | opp_overlap 3372219 GTTTCGGTCCAGAAA GGCG CCTT CGCC ACCGGTGTTCCTCCT TERM 3810 3373006 - 3372976 - T 83 -11.3 -3.03635 | opp_overlap 3372971 3373005, overlap 3373005 TAAATTCTTTGAATA TCTTTTGTGTGCT TTCAC AGCACTCAAAAGA CACGCTTCGTCTCTT dnaK3 3375941 - 3373170 - | DnaK3 TERM 3811 3373631 - 3373641 + g 78 -2.4 -5.27335 | opp_overlap 3373626 TTTCAGTCAACTCCT GGGG GGA CACC TTTTTCTTTAAACCG TERM 3812 3375208 - 3375192 - G 70 -9.4 -3.55622 | overlap 3375196 GGCAAGGCGTTCAAA CCGAGG CGTTC CCTCGG ACGCCGAAAGCGTGA dnaK4 3377755 - 3375953 - | DnaK4 HRM2_29710 3377933 - 3377760 - | hypothetical protein HRM2_29720 3378678 - 3377950 - | hypothetical protein TERM 3813 3378872 - 3378851 - R 100 -7.3 -5.98781 | opp_overlap 3378851 TATAATCAAAAAAAA CCACACTGA CAAG CCAGTATGG TTTTTAATAATAATA TERM 3814 3378851 - 3378872 + r 71 -4.4 -4.78107 | opp_overlap 3378851 TATAATCAAAAAAAA CCACACTG ACAAGC CAGTATGG TTTTTAATAATAATA HRM2_29730 3379241 - 3378951 - | hypothetical protein ugd 3380797 - 3379466 - | Ugd TERM 3815 3380683 - 3380693 + g 85 -4 -5.52384 | overlap 3380679 GAATACCCTGTTTGA GATT TTC AATC TTTTTTTCATCCACA capD1 3381855 - 3380794 - | CapD1 TERM 3816 3380935 - 3380947 + gr 73 -3.4 -5.03747 | overlap 3380931 TACGTCTCCCGGCTG CATG GGGAG CATG TTTTTTACAGCCTTT TERM 3817 3381059 - 3381090 + gr 73 -5 -4.69027 | gap 1 GGGGCAGAGGTGCCA CTGTCGG-CCAGGGA CTC TCCCGGCACCGGCGG TTTTTCCATCACTTT TERM 3818 3381442 - 3381426 - GR 80 -10.1 -3.58343 | overlap 3381429 TTGAGGAGGCGTAAA CCAGGTG CCC CACCCGG CCGTGGCGGCACCCC TERM 3819 3381455 - 3381429 - GR 76 -10.2 -2.91873 | gap 1, overlap 3381426 AGGAGGCGTAAACCA GGTGCC-CCAC CCGGCC GTGGCGGCACC CCTCAAGGATATTAG capD2 3383752 - 3381821 - | CapD2 TERM 3820 3383067 - 3383077 + gr 91 -5.4 -5.4477 | GCGATGAGAACTTCA GTTG CTT CAAC TTTTTTTGCCACTTT TERM 3821 3383122 - 3383136 + gr 79 -5 -5.04265 | TGACATTCAGAACGG TAATCC CAT GGATTG TTTTTCCTATTTTTT wecA 3384683 - 3383739 - | WecA TERM 3822 3384664 - 3384647 - G 100 -3.3 -5.86061 | CTTTATGAAAAAAAA GAGCTGC ACCT GCGACTC CGAATAATAAAGATA galE2 3385708 - 3384695 - | GalE2 HRM2_29790 3386463 - 3385687 - | putative glycosyl transferase (group 2 family protein) pgaC 3387382 - 3386456 - | PgaC HRM2_29810 3388781 - 3387387 - | putative flavin-containing amine oxidoreductase family protein TERM 3823 3387617 - 3387630 + g 88 -3.8 -5.55664 | CCCTGCCTGGCGTGG GGGT CGGATA ACCC TTTTTTTCATGGTGA TERM 3824 3387723 - 3387738 + g 85 -7.6 -4.84017 | opp_overlap 3387722 3387723 GACATCCGCCACAAT GGTTGA AGGA TCAACC TTTTTGTCACGGCTT TERM 3825 3388380 - 3388394 + g 76 -7.1 -4.56597 | TGCATCAATCCACGC CCCGA AATTA TCGGG TTTTTCAGCCAAGGC HRM2_29820 3389173 - 3388946 - | hypothetical protein TERM 3826 3389874 - 3389863 - g 71 -5.8 -4.31608 | overlap 3389860 AACAAATAGAAAGAA CAGG GGGA CCTG TCAATCCACCAACAG HRM2_29830 3389363 - 3391060 + | putative glycosyl transferase (group 2 family protein) TERM 3827 3391256 - 3391242 - g 70 -2.7 -4.77036 | opp_overlap 3391242 TTTTATTATTAAAAA CGGCC ATCCA GGCAG TATTGAATCAGACCC HRM2_29840 3391190 - 3392095 + | putative glycosyl transferase (group 2 family protein) TERM 3828 3392193 - 3392182 - g 85 -7.2 -4.8622 | CTTTTTAATGAAAAA GGCC ACCA GGCC CACCATTATTTTGCC glgA3 3392092 - 3393348 + | GlgA3 TERM 3829 3393591 - 3393563 - g 100 -6.8 -5.44721 | opp_overlap 3393563 ACGATTTCAAAAAAA CCAGGCAAATTT TAAGG AAATTTACCAGG TGATATGCGACGACA TERM 3830 3394120 - 3394103 - g 70 -10.5 -2.92475 | overlap 3394102 GGCACGCCTACAAAC CCCAGGG CTTA CCCCGGG TGAAAAGGTGTATGC HRM2_29860 3393345 - 3395396 + | hypothetical protein algJ 3396883 - 3395450 - | AlgJ TERM 3831 3395712 - 3395722 + g 91 -6.8 -5.14563 | CCCTGCTTGACCTGA TGGG GCC CCCA TTTTTTAATGGAAAA algI2 3398322 - 3396892 - | AlgI2 TERM 3832 3397057 - 3397046 - G 74 -2.2 -5.09426 | CCGAATCTGAAAAAA GGAA TCAG CTCC TTGATGGGCAGGGAA HRM2_29890 3399915 - 3398410 - | hypothetical protein TERM 3833 3399071 - 3399055 - G 91 -4.5 -5.54338 | opp_overlap 3399055, overlap 3399039 CAATGAAAATAAAAA TATTGCT ATA AACAATA TCATTTTTTCATTAA HRM2_29900 3400528 - 3400055 - | hypothetical protein TERM 3834 3400210 - 3400192 - GR 80 -4.5 -5.09259 | overlap 3400193 GATGGGAAAATAAAA CCGCCAC AAGAA GTGACGA CAGCTGAACGACTAA TERM 3835 3400326 - 3400314 - GR 100 -7.7 -5.626 | overlap 3400318 3400321 TAGGCCACAAAAAAA CCAAC CAG GTTGG AAACCAACAGGGACG HRM2_29910 3401399 - 3400467 - | putative glycosyltransferase HRM2_29920 3403007 - 3401496 - | hypothetical protein TERM 3836 3402495 - 3402476 - G 73 -5 -4.63592 | TTTTAATAAAAACAA TTGGCTCA TCTT TTAGCCAA AAATGGATTAAAAAG HRM2_29930 3403843 - 3403067 - | putative glycosyl transferase (group 2 family protein) HRM2_29940 3405981 - 3403945 - | hypothetical protein TERM 3837 3404337 - 3404351 + g 73 -2.9 -5.04868 | opp_overlap 3404331 AGCAAAGAGCCCCCT GTTTT GGGGA AAAAC TTTTATTTAATTTCA HRM2_29950 3407721 - 3406267 - | hypothetical protein HRM2_29960 3411058 - 3407723 - | hypothetical protein TERM 3838 3408239 - 3408253 + g 70 -4.2 -4.63184 | opp_overlap 3408227 3408239, overlap 3408241 AAAGCCTCCTATAAA CATGAG GCC CTCACG TTTTTCAAATGAATT TERM 3839 3408902 - 3408913 + g 84 -4.4 -5.25803 | AAATTTTCCCTGGTT TACC TGCT GGTA TTTTTTATACCCCTT TERM 3840 3409401 - 3409413 + g 70 -9.1 -3.52678 | opp_overlap 3409400 3409401, overlap 3409399 CAGGCTTCAACAAAC CCCAG ATT CTGGG TATTTGTCACAACTT HRM2_29970 3411688 - 3411074 - | putative SAM-dependent methyltransferase HRM2_29980 3412970 - 3411693 - | putative ABC-type transporter, ATPase protein HRM2_29990 3413876 - 3413115 - | putative ABC-type transporter, permease protein HRM2_30000 3415669 - 3413987 - | hypothetical protein TERM 3841 3414150 - 3414164 + g 100 -7.1 -5.24129 | ATCCGGCCGATCTGT CCCTC CATCA GAGGG TTTTTTCTCAACACA HRM2_30010 3416426 - 3415731 - | hypothetical protein HRM2_30020 3417808 - 3416423 - | putative selenocysteine protein HRM2_30030 3420175 - 3417824 - | hypothetical protein TERM 3842 3418461 - 3418443 - G 100 -6 -5.60993 | opp_overlap 3418427, overlap 3418427 CCGGGGATAAAAAAA TCCTGG GCTGTCT CCAGGA GGGGCAATCGATCGG TERM 3843 3418926 - 3418949 + g 76 -6.8 -4.56597 | gap 1 TCCAGAATACCCGAC CAGT-TGGACG CCT TGTCCAGACTG TTTTTCACCCCCACC TERM 3844 3419851 - 3419863 + g 78 -2.6 -5.24129 | CATCGGCATGGGCCA GGGT CATCA GCCC TTTTTTATCGCCAAC HRM2_30040 3420703 - 3420254 - | putative penicillin-binding protein PBP TERM 3845 3420396 - 3420384 - G 72 -4.1 -4.78029 | overlap 3420385 CCAATAAAATCAAAA CTCTC ACG GAGAA AAACACGACCGGTTT TERM 3846 3420704 - 3420715 + r 78 -2.2 -5.51353 | CACCTTAAATTTCAC TAGG ACCA CCTG TTTTTCTTCTTTTTA TERM 3847 3420797 - 3420769 - R 100 -14 -5.75342 | overlap 3420743 TGCTGCTAAAAAAAA TCAGGAGGTGAA ACAAG TCCACCTCCTGA AATTCAAACAACAAG HRM2_30050 3422664 - 3420841 - | hypothetical protein TERM 3848 3421537 - 3421526 - G 71 -5.8 -4.33105 | overlap 3421514 TAACCACCAGTAAAA GTGG AATC CCAC CAGACAACGGAATCA HRM2_30060 3424204 - 3422852 - | hypothetical protein TERM 3849 3423715 - 3423683 - G 85 -12.1 -3.65351 | GGAGCCGTAGTCAAA CCCGATCCCGATCTC TTC AAGATCAGGATCAAG CAAATTGCGAAGTCC btuB2 3426502 - 3424442 - | BtuB2 HRM2_30080 3427847 - 3426510 - | two-component sensory box histidine kinase/response regulator protein TERM 3850 3426642 - 3426614 - G 81 -12.6 -3.28712 | opp_overlap 3426616, overlap 3426616 3426641 GTGCCTGTCTCACAA TATCTGTCTCCA GGGTT TGGAGACAGACA CCATCCGGCGGAAGT TERM 3851 3426640 - 3426616 - G 81 -13 -3.21276 | opp_overlap 3426616, overlap 3426614 GCCTGTCTCACAATA TCTGTCTCCA GGGTT TGGAGACAGA CACCATCCGGCGGAA TERM 3852 3427132 - 3427114 - G 77 -9.6 -3.6715 | GCATCCAACGGTAAA TCCCCGAT CTC ATCGAGGA AAAGCGTTCCGCCGG atoS2 3429276 - 3427852 - | AtoS2 TERM 3853 3428137 - 3428149 + g 91 -7.7 -5.09173 | CCCACCCCTTTGGTT TGCCT CAC AGGCA TTTTTTACAATATTG HRM2_30100 3430214 - 3429273 - | hypothetical protein TERM 3854 3429998 - 3429987 - G 90 -5.8 -5.24531 | ATTTTCGACAAAAAA CAGG TCTG CCTG CCCTCCAAAGGTTGA gspD2 3432566 - 3430281 - | GspD2 TERM 3855 3432263 - 3432274 + g 70 -2.2 -4.96646 | TTCCATCCGTTTTTT CGGA CCCA TCTG TTTTTCCTTCTGTAA HRM2_30120 3433288 - 3432569 - | hypothetical protein HRM2_30130 3433854 - 3433285 - | hypothetical protein gspL 3435253 - 3433856 - | GspL TERM 3856 3434828 - 3434840 + g 100 -6.9 -5.75342 | opp_overlap 3434828 TATGAAATTGAGATA GGGCC GAA GGCTC TTTTTTTTGACAACA gspK2 3436372 - 3435323 - | GspK2 TERM 3857 3436101 - 3436122 + g 70 -4.5 -4.66938 | TCCACGGGATCTACC TTGGAAAAA ACAT TTTTACCAA TTTTCTCTTCCGGCT gspJ2 3437013 - 3436369 - | GspJ2 TERM 3858 3436459 - 3436469 + g 100 -6.8 -6.11229 | GATAAAGAGTTTAAC TGCC GAC GGCA TTTTTTTATTTTCGT TERM 3859 3436671 - 3436657 - G 70 -4.2 -4.64861 | TTTCTCGAAAAGAAA GAGAGA CTC CCCCTC CCCGGTCTTTTCTGT TERM 3860 3436770 - 3436757 - G 72 -3.8 -4.76644 | AACATGGAGCAAAAA GCCA TGGACT TGGC ATCTCCCTTAAAATT gspI 3437429 - 3437013 - | GspI HRM2_30180 3440107 - 3437444 - | hypothetical protein TERM 3861 3438795 - 3438781 - G 79 -5.6 -5.05782 | ATTTATCTGAAAAAA CGGGAA CCC TGCCCG GTCCGAAAATATGCA TERM 3862 3439811 - 3439786 - G 86 -8.2 -4.62069 | GCCCCACCCGAAAAA GCTGGAGGCC CACATC GCCCCCCAGC AGATGGACCAAGTAG HRM2_30190 3440509 - 3440252 - | hypothetical protein HRM2_30200 3441587 - 3440514 - | hypothetical protein TERM 3863 3440651 - 3440632 - G 74 -4.9 -4.81212 | TTGATCAGAATAAAA CCTGCGG CATTTT CCGGAGG AACGGCAAAAAGGGA TERM 3864 3441970 - 3441988 + G 70 -11 -2.55896 | overlap 3441969 3441967 TGCCCGACCCCGAGC TGGCCTGC CGG GCAGGTCA ATATTGCTTAGTAAA HRM2_30210 3441954 - 3442310 + | hypothetical protein HRM2_30220 3442848 - 3442738 - | hypothetical protein gspH 3443575 - 3443033 - | GspH gspG2 3444002 - 3443562 - | GspG2 gspF2 3445274 - 3444045 - | GspF2 TERM 3865 3444473 - 3444487 + g 70 -2.7 -4.81249 | opp_overlap 3444472 3444475 TTTTCTTTACCAGAT CACCC ACCAC GGGCG TTTTTACCTTTAACA gspE3 3446808 - 3445276 - | GspE3 TERM 3866 3445688 - 3445667 - G 100 -6.6 -5.5074 | GAACTCAACAAAAAA TGCTCGAC CCCCAT GTCAAGCA ACCGTGCGATGGCAC TERM 3867 3446741 - 3446770 + g 70 -10.9 -2.9062 | opp_overlap 3446741, overlap 3446738 3446750 AATTTTACCGACAAA TTTTCCAGGGGAA CAGG TTCCTTTGGAAAA TCATTGTATGATACC speE2 3448568 - 3446934 - | SpeE2 HRM2_30280 3449382 - 3448513 - | hypothetical protein HRM2_30290 3450089 - 3449379 - | hypothetical protein TERM 3868 3449582 - 3449565 - G 74 -4.1 -5.00616 | GTTCCTGCCAAAAAA CGGTC GGTTCGTG GACCG GGACTGGTTGTACAT TERM 3869 3449697 - 3449673 - G 73 -10.7 -3.29144 | overlap 3449654 3449674 3449682 GTACTTTCCGTAGAA CTCCCAGAAGG ATC CCCCCTGGGAA TCCTGGCGCCAGTTG TERM 3870 3449696 - 3449674 - G 73 -12 -2.57344 | overlap 3449654 3449673 3449682 TACTTTCCGTAGAAC TCCCAGAAGG ATC CCCCCTGGGA ATCCTGGCGCCAGTT TERM 3871 3449700 - 3449682 - G 77 -11 -3.34233 | overlap 3449674 3449673 GTAGAACTCCCAGAA GGATCCCC CCT GGGAATCC TGGCGCCAGTTGCCG TERM 3872 3449925 - 3449913 - G 76 -4.7 -5.02476 | ATAGGTTTTAAAAAA GGTGC CCT GCTCC CGCATATCCTCAAGA HRM2_30300 3450286 - 3450113 - | hypothetical protein TERM 3873 3450336 - 3450312 - g 79 -7.1 -4.72272 | overlap 3450314 GCCTTTGATTAAAAA TTCAGCCCTGA CTT TCAGTGCTGCA GTCCTGCTGGTGATC TERM 3874 3450609 - 3450595 - g 73 -2.8 -5.01732 | overlap 3450597 AATGCCCTGAAAAAA CTTTTG GAG CAAAGG GGATTAAAGTCTGTT HRM2_30310 3450289 - 3450864 + | hypothetical protein TERM 3875 3451755 - 3451777 + G 70 -3.2 -4.86731 | opp_overlap 3451753 3451756, overlap 3451756 TTTGGAGACCAAGGC ACCCCAGCGC ACG GCCCTTGGGC TTTTCTTTGACAAGG TERM 3876 3452217 - 3452227 + G 72 -8.2 -3.96483 | GGAAATCCTTGACTG CGGC CCT GCCG TTCTTTCCATGCACT HRM2_30320 3450886 - 3452313 + | putative peptidase M18 family protein TERM 3877 3452580 - 3452567 - g 74 -2.3 -5.11836 | ACACTTAAAATAAAA GGCTC TGGA GATCC GCTCATCACATCGGA TERM 3878 3452671 - 3452681 + G 100 -5.4 -5.75342 | GATCAAGACCCTAGT GGTT GAC AACC TTTTTTTTGAGCCGG TERM 3879 3453346 - 3453336 - g 74 -6.8 -4.3898 | opp_overlap 3453344, overlap 3453338 3453339 ACGAGTTCTACAAAA CAGG CAC CCTG GACGGGGTGCGTACC TERM 3880 3453358 - 3453372 + G 80 -10 -4.07568 | overlap 3453344 CCTGGACGGGGTGCG TACCCG GGT CGGGTA TTTTACAGGCAAAAA dacB 3452297 - 3453478 + | DacB HRM2_30340 3454295 - 3453510 - | hypothetical protein HRM2_30350 3455026 - 3454292 - | putative ATPase rpoZ 3455241 - 3455035 - | RpoZ greA1 3455784 - 3455257 - | GreA1 TERM 3881 3455804 - 3455761 - G 100 -7.4 -5.61277 | overlap 3455763 TATAAAAAAACAAAA TAGTCCATCTCCAGGCCT GCCCATAT AGGCCAAGGGATGGACAA ACAAACAATCATTAA TERM 3882 3455802 - 3455763 - G 87 -10 -4.38305 | overlap 3455761 TAAAAAAACAAAATA GTCCATCTCCAGGCCT GCCCATAT AGGCCAAGGGATGGAC AAACAAACAATCATT TERM 3883 3455843 - 3455823 - R 100 -11.9 -4.83593 | opp_overlap 3455822 3455820 3455823 AACAATCATTAAAAA GAGCCTGTC ATG AACAGGCTC CTGCTTTTCTTAAAT TERM 3884 3455823 - 3455843 + r 76 -11.2 -2.55242 | opp_overlap 3455823, overlap 3455822 3455820 AACAATCATTAAAAA GAGCCTGT CATGA ACAGGCTC CTGCTTTTCTTAAAT psd 3456557 - 3455886 - | Psd TERM 3885 3456098 - 3456126 + g 79 -6.7 -4.59982 | overlap 3456116 CCACCCCGTAGCGGC TGCCCTGGTTC GTCCGGA GGACAAGGGCA TTTCTTTCATTGTCC TERM 3886 3456414 - 3456402 - G 84 -10.5 -4.11235 | GAACCAGCAGACAAA GGCCG TCG CGGCC AGGGCTGCAACGCCA HRM2_30390 3457291 - 3456590 - | putative peptidase M22 TERM 3887 3456726 - 3456703 - G 100 -12.4 -4.56597 | CCGGGGTCTGAAAAA GGGCATGGGC CAAT GCCGATGCCC TGACCTGGTTCTGAA lon4 3459711 - 3457288 - | Lon4 TERM 3888 3458282 - 3458265 - G 70 -8.5 -3.66489 | overlap 3458263 TAAGGATAAACAATA CCTTTGA AAGG TCAAAGG GCATGTTCAGGTAAT TERM 3889 3458870 - 3458881 + g 76 -5.8 -4.66833 | TCAAGGGAATCAGGT GGCA GTTT TGCC TTTTTCAGCTTGACC TERM 3890 3459385 - 3459399 + g 76 -7.1 -4.46926 | CTGGGCCTTGGTGAT GCCCT GCACA AGGGC TTTTATCCTGCCGTC TERM 3891 3459886 - 3459863 - H 71 -3.2 -5.0538 | TTGGATCTGAAAAAA TTCTATAGGG GAGA CACTATAAAA GGAGACCCTATGACC TERM 3892 3460488 - 3460502 + G 70 -4.2 -4.64144 | TGGTCGGCTGGCAGG GGGTGG CAT TCACTC TTTTTGCCGGTTCTT pilD 3459896 - 3460672 + | PilD cheX1 3461130 - 3460681 - | CheX1 TERM 3893 3460745 - 3460775 + g 79 -12.5 -3.05844 | AGCACCAGTACCCGG CCGGCATGGGACA TATTC TGCCCCCTGCCGG TCTTGACCTCCAGAA TERM 3894 3461618 - 3461606 - g 70 -3.3 -4.89562 | overlap 3461614 3461615 CGAAAAGCAAGAAAA GGAAG AAA CCCCC AGACAGGGAATGAAA hbp 3461432 - 3461701 + | Hbp TERM 3895 3461727 - 3461766 + F 78 -9.5 -3.70511 | opp_overlap 3461723 3461747 3461750, overlap 3461726 3461729 3461731 GTTTCATACCAGCCG CT-CAGGCAGCACTTGTAC AAGA GTACA-GTGCTGCCTGTAA TCTTTATATTCCATG TERM 3896 3461729 - 3461763 + F 100 -18.1 -2.94681 | gap 1, opp_overlap 3461723 3461747 3461750, overlap 3461727 3461726 3461731 TTCATACCAGCCGCT CAGGCAGCACTTGTAC AAGA GTACA-GTGCTGCCTG TAATCTTTATATTCC TERM 3897 3461731 - 3461761 + F 100 -14.9 -3.01393 | gap 1, opp_overlap 3461723 3461747 3461750, overlap 3461729 3461727 3461726 CATACCAGCCGCTCA GGCAGCACTTGTAC AAGA GTACA-GTGCTGCC TGTAATCTTTATATT TERM 3898 3462051 - 3462035 - g 76 -5.1 -4.8487 | GCAGCAAAAAAAGAA TCGGCAT CAA ATGCAGA CCAATCCAGTTTGAC TERM 3899 3462100 - 3462072 - g 70 -8.2 -3.79906 | gap 1, opp_overlap 3462063 3462075 3462076, overlap 3462060 3462075 CCAGTTTGACAACAA CTAC-CGGTTGTC AAAC GACAACCGTGTTG GTGCCATCATTTTTA TERM 3900 3462076 - 3462095 + G 77 -12.2 -3.1478 | opp_overlap 3462060 3462075 3462072, overlap 3462075 3462063 TTTGACAACAACTAC CGGTTGTC AAAC GACAACCG TGTTGGTGCCATCAT HRM2_30440 3461779 - 3462561 + | hypothetical protein sbcB 3463989 - 3462574 - | SbcB TERM 3901 3464004 - 3464041 + r 72 -7.1 -3.98312 | opp_overlap 3464004 TGGATACAAAAAAAA TGGGAATACTTCATTCT TTAA AAAAAGAAGCATTCCCA TTTGAATTTTATCTC TERM 3902 3464041 - 3464004 - R 100 -11.5 -6.02914 | opp_overlap 3464004 TGGATACAAAAAAAA TGGGAATACTTCATTCT TTAA AAAAAGAAGCATTCCCA TTTGAATTTTATCTC rpsI 3464445 - 3464050 - | RpsI rplM 3464906 - 3464472 - | RplM HRM2_30480 3465432 - 3464980 - | hypothetical protein HRM2_30490 3466237 - 3465413 - | hypothetical protein HRM2_30500 3467326 - 3466283 - | putative ErfK family protein (precursor) TERM 3903 3466845 - 3466870 + g 74 -6.9 -4.33621 | gap 1, opp_overlap 3466844 TTCATGGCAACACAC CCGTTTGAATCC ATG GGTTTCAA-CGG TTTATTGGTTCCATG ruvB 3468393 - 3467329 - | RuvB ruvA 3469034 - 3468390 - | RuvA TERM 3904 3468649 - 3468625 - G 83 -5.5 -5.14563 | overlap 3468627 GCCGCGAGCAAAAAA CGGCCGGCCTT TCC ATGGAGGGCCG CAACAATCTTCTGGG TERM 3905 3468829 - 3468801 - G 77 -11.9 -3.15544 | GTCCACGGTTATGAA CAGCTGAAAAAAA TCC TTTTCCTCAGCTG AGTCAAAACCAATGA ruvC 3469525 - 3469031 - | RuvC HRM2_30540 3470411 - 3469551 - | putative aspartyl/asparaginyl beta-hydroxylase (Aspartate beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) TERM 3906 3470547 - 3470598 + r 70 -10 -2.52543 | ATCGTCCGACCACCA TGCGACTCGGGCGCAGCAGTCAAA CAAA TATGACCGCTGCGCCCGAAAATCA TGAATTCAAACCCGT TERM 3907 3470614 - 3470625 + r 75 -7.2 -4.29493 | TGAATTCAAACCCGT CGGC CCAA GCCG TTTATCTATTTGATG pal 3471224 - 3470631 - | Pal aglW 3472603 - 3471260 - | AglW TERM 3908 3471340 - 3471322 - G 88 -3.7 -5.53991 | opp_overlap 3471326 CATCCATCAAAAAAA GGCGCCG CTGTT CGCCACC GGTTGCTGTCATCAC HRM2_30570 3473585 - 3472611 - | hypothetical protein tolR 3474017 - 3473595 - | TolR tolQ1 3474727 - 3474017 - | TolQ1 TERM 3909 3474497 - 3474484 - G 74 -9.5 -3.52678 | opp_overlap 3474484 3474483, overlap 3474471 3474482 AACCGGCTACAAACA CCCGG GCAA CCGGG CTCTGTTTCAAGACC TERM 3910 3474821 - 3474848 + r 100 -12.7 -3.50219 | opp_overlap 3474821 TGCTCCACGATAAAA GCCCCTGCGCA AAAGTA TGCACAGGGGC TTGTGTAACACTATT TERM 3911 3474848 - 3474821 - R 100 -14.9 -4.46212 | opp_overlap 3474821 TGCTCCACGATAAAA GCCCCTGCGCA AAAGTA TGCACAGGGGC TTGTGTAACACTATT groEL 3476526 - 3474877 - | GroEL TERM 3912 3476473 - 3476496 + g 71 -7.4 -4.11773 | gap 1 TGCAAGGGTTTGTAC GCCCTTG-AGC ATT GCTTCACGGGC TTTTGCAGCATATTT groES 3476893 - 3476606 - | GroES HRM2_30620 3477244 - 3476972 - | putative FmdB family protein (regulatory protein) HRM2_30630 3477888 - 3477343 - | hypothetical protein TERM 3913 3477412 - 3477402 - G 74 -8.2 -3.97709 | AGTATTCAAGAATAA GGGC AAG GCCC GCAAGCCGGACCGGT HRM2_30640 3477997 - 3478113 + | hypothetical protein TERM 3914 3478176 - 3478129 - T 100 -16.4 -2.79796 | gap 1, opp_overlap 3478129, overlap 3478151 GCGGACTTGAGGATA TGGGTTGCGGGGTTGTGAAACAG AAA CAGTTTCACCACCCCGCA-CTCA TTTTAATGGGCCACT TERM 3915 3478129 - 3478176 + T 100 -18.6 -4.25283 | gap 1, opp_overlap 3478129 3478151 GCGGACTTGAGGATA TGGGTTGCGGGGTTGTGAAACAG AAA CAGTTTCACCACCCCGCA-CTCA TTTTAATGGGCCACT hflC 3479139 - 3478192 - | HflC hflK 3480002 - 3479136 - | HflK HRM2_30670 3482064 - 3480511 - | transposase (IS4 element) TERM 3916 3483180 - 3483229 + G 74 -9.5 -3.54424 | gap 1 CCGCCGACCAGGCGA CACTT-GATCACCTGGGCAA ACCCATCACAG TTGCCCAGGTGATCCAGGCG TTTGACACCATGCAG HRM2_30680 3482159 - 3483496 + | hypothetical protein TERM 3917 3484208 - 3484195 - g 86 -8.1 -4.62471 | TTCAAGGCTCAAAAA GCCAG CCAT CTGGC AAAAGATCGTCCGAA hisK 3483569 - 3484492 + | HisK trmH2 3484495 - 3485238 + | TrmH2 ftn 3485281 - 3485919 + | Ftn fdx7 3487490 - 3485940 - | Fdx7 fdx8 3489436 - 3487487 - | Fdx8 TERM 3918 3488673 - 3488659 - G 80 -2.8 -5.24129 | overlap 3488660 TCTTTTCAGAAAAAA CGATCC GTG AGATCA CATCCTCACCATAGC TERM 3919 3489086 - 3489064 - G 70 -3.2 -4.82901 | opp_overlap 3489070, overlap 3489066 CCGGTGGGATAAAAA GCCCCTGCTC CTT GAGCTGGTTC AGATCAAAAGTTCGG TERM 3920 3490444 - 3490456 + G 76 -7.7 -4.28361 | CAAAATTCAGGTGCC TTGGC ATG GCCAA TTTTGATACCCTTGA TERM 3921 3490851 - 3490837 - g 91 -11.4 -4.13767 | TGCCCTACTCCAAAA TGGCGG AAA CCGCCA AAACCATACACCAGA glcD4 3489786 - 3491216 + | GlcD4 TERM 3922 3491605 - 3491647 + G 79 -12.7 -3.14132 | gap 1, overlap 3491607 CACTGATTGTGTCGC CTGCCTTGCCTGCGTACGGG CCTG CCCCCACG-AGGCAAGGCTG TTCGTCAACGGCAAG TERM 3923 3491607 - 3491645 + G 81 -13.9 -3.13403 | gap 1, overlap 3491605 CTGATTGTGTCGCCT GCCTTGCCTGCGTACGGG CCTG CCCCCACG-AGGCAAGGC TGTTCGTCAACGGCA HRM2_30750 3491249 - 3492193 + | putative fusion protein GlcF/heterodisulfide reductase HdrA HRM2_30760 3492204 - 3493451 + | hypothetical protein TERM 3924 3493533 - 3493557 + T 95 -5.6 -5.67283 | opp_overlap 3493533 AATCAACGCAAAAAA GCAGCCCGGA AATAA TCCTGACTGC TTTTTTGTTTAACTT TERM 3925 3493557 - 3493533 - T 95 -7.8 -5.1848 | opp_overlap 3493533 AATCAACGCAAAAAA GCAGCCCGGA AATAA TCCTGACTGC TTTTTTGTTTAACTT HRM2_30770 3495121 - 3493586 - | putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD) TERM 3926 3494483 - 3494497 + g 82 -7.8 -4.67011 | CTTCAAGGTTTCACC CTGGTC AAT GACCGG TTTTTCAGTGGGCTT HRM2_30780 3496263 - 3495118 - | putative fusion protein, heterodisulfide reductase (HdrA) / ferredoxin (iron-sulfur-binding protein) TERM 3927 3495947 - 3495965 + g 76 -5.8 -4.64676 | TTGAGGACCTTTCCA GCGGCCTG GTC CTGGGCGC TTTTCTTAAGGGTAA metF2 3497207 - 3496284 - | MetF2 TERM 3928 3497090 - 3497100 + g 74 -6.8 -4.41047 | opp_overlap 3497081 CCACAACACCCTTGA GGTG GGC CACC TTTTCCTTCAGGGCT HRM2_30800 3497928 - 3497254 - | putative zinc-finger protein TERM 3929 3498047 - 3498067 + H 73 -8.5 -3.65314 | CTAAGAATTTATCGT TTTATGAAT TTC ATTCATAAA TTCTTGACAATTCAA TERM 3930 3498761 - 3498743 - g 70 -8.8 -3.53091 | AGCTTGCCCTTCAAA GGGACGGC ACC ACCATCCC CATCAGCCTCAATGC TERM 3931 3498961 - 3498951 - g 70 -8.2 -3.66018 | overlap 3498952 CCACCAGCTCAACAA CCCC CTT GGGG GAATCACTCTGTTCG TERM 3932 3499124 - 3499104 - g 70 -9.7 -3.25823 | TGCCCGGCAGACCAA TCGCGAGGT CAG ACCCCACGA CATCAACACCATTGT HRM2_30810 3498106 - 3499593 + | predicted two-component sensor histidine kinase TERM 3933 3499708 - 3499720 + F 74 -10.5 -2.62933 | AACATATACCCTGTT CCGGC CGT GCCGG TCATATAAACACTTC HRM2_30820 3499815 - 3500213 + | predicted two-component response regulator aroE2 3500483 - 3501253 + | AroE2 phoR 3501257 - 3502774 + | PhoR TERM 3934 3502756 - 3502768 + T 74 -10.5 -2.73124 | opp_overlap 3502754 3502756, overlap 3502755 CCTCCCCCTGAAACA GCCCC AAG GGGGC ATTTAGCCCCTAAAC TERM 3935 3502768 - 3502756 - T 78 -10.5 -3.34398 | opp_overlap 3502756 3502755, overlap 3502754 CCTCCCCCTGAAACA GCCCC AAG GGGGC ATTTAGCCCCTAAAC flgG1 3503180 - 3502827 - | FlgG1 TERM 3936 3503063 - 3503073 + g 70 -4.6 -4.63527 | opp_overlap 3503063 GGCCTTCTGTAACAA GGGC ACG GCTC TTTTTAAAATCATCG TERM 3937 3503111 - 3503125 + g 87 -10 -4.41494 | CATTGGCAACATTGT TGGCTG AAA CAGCCA TTTTCGTTCCAAATG TERM 3938 3503450 - 3503399 - R 100 -17.1 -3.54543 | opp_overlap 3503402 3503405, overlap 3503402 3503406 AGTCATGCCTGCAAA CAACAAATGACATTTTTTGTC CCATATGGTT GACAAAAAATGTCACTTGTTG CTTCAAATCGAACGT TERM 3939 3503402 - 3503447 + r 81 -10.8 -3.35813 | opp_overlap 3503399 3503402 3503406, overlap 3503405 CATGCCTGCAAACAA CAAATGACATTTTTTGTC CCATATGGTT GACAAAAAATGTCACTTG TTGCTTCAAATCGAA TERM 3940 3503447 - 3503402 - R 100 -13 -3.9122 | opp_overlap 3503402 3503405, overlap 3503399 3503406 CATGCCTGCAAACAA CAAATGACATTTTTTGTC CCATATGGTT GACAAAAAATGTCACTTG TTGCTTCAAATCGAA TERM 3941 3503443 - 3503406 - R 100 -10.2 -4.56978 | opp_overlap 3503405 3503402, overlap 3503402 3503399 CCTGCAAACAACAAA TGACATTTTTTGTC CCATATGGTT GACAAAAAATGTCA CTTGTTGCTTCAAAT metF3 3504394 - 3503465 - | MetF3 TERM 3942 3503677 - 3503687 + g 70 -8.2 -3.73936 | CGGGCACATCCATTC CCGG CAC CCGG TTCTTCATGAACTTT HRM2_30870 3505059 - 3504391 - | putative zinc-finger protein mvhD7 3505448 - 3505095 - | MvhD7 hdrL3 3509995 - 3505532 - | HdrL3 TERM 3943 3506964 - 3506985 + g 82 -7.3 -4.62069 | overlap 3506965 CTCTTTTCCAGGGTT TCCATGAAG ATAT CTTCGTGGG TTTTTGGGGTGCAGG TERM 3944 3508175 - 3508223 + g 74 -4.3 -4.79223 | overlap 3508176 3508187 CACCTCGTCAAAACC TGCAAGGCGCCGTTCCATGGGAA TTT TTGCCATGGTCTGGCGCTCGGCC TTTTTCATCGTGTCC TERM 3945 3508187 - 3508197 + g 73 -5.4 -4.63928 | overlap 3508176 3508175 ACCTGCAAGGCGCCG TTCC ATG GGAA TTTTTGCCATGGTCT TERM 3946 3509014 - 3509024 + g 74 -8.2 -3.97511 | opp_overlap 3509002 3509013 3509011 3509010 CAACGGTGAAATCAC GGCC AAG GGCC TTGTTATATTGAATG TERM 3947 3509549 - 3509535 - G 70 -4.2 -4.65895 | overlap 3509537 TTGGTGATGGAAAAA GCCCAT GGA ATGGCC TGCTCATACTGCTTA metF4 3510889 - 3510005 - | MetF4 TERM 3948 3510718 - 3510741 + g 73 -5.2 -4.61873 | overlap 3510712 3510720 CAAGGCTTGCCCCGA GGGAGGTCAT TCGC ATGACCGCAC TTTTCATTTCTGAGA TERM 3949 3512679 - 3512661 - g 78 -3.9 -5.08824 | overlap 3512662 CCCTCACCCAAAAAA TTGTCCA TGAGG TGAACAA CCCCATCGTCATAAT HRM2_30910 3511160 - 3513382 + | fusion protein comosed of N:signal transduction protein - C:ATPase-like osmosensitive K+ channel histidine kinase TERM 3950 3513942 - 3513921 - g 82 -8.1 -4.49756 | gap 1 GGTTAAACAGGAAAA GGTGAT-CCT TGT AGGCATCACC GACCCTTTGGCCCTC TERM 3951 3514101 - 3514091 - g 70 -8.2 -3.80768 | overlap 3514087 3514092 GACAGACAAAACCAA GGCC AGC GGCC CAGCCGAAAACCAGG parA 3513490 - 3515139 + | ParA HRM2_30930 3516020 - 3515136 - | putative tetrapyrrole (corrin/porphyrin) methylase TERM 3952 3515532 - 3515516 - G 80 -2.9 -5.28176 | opp_overlap 3515519 GGGATTCATAAAAAA CAAGGGT GGC ACGCTCG TTTGCAAGGGCCCCA HRM2_30940 3516366 - 3516001 - | putative archaeal-type Holliday junction resolvase TERM 3953 3516132 - 3516122 - G 74 -2.4 -5.1861 | TCCATGAGGAAAAAA CGGG CAC CCAG AATGATCTTCTGCTG TERM 3954 3516347 - 3516314 - G 76 -7.3 -4.37886 | gap 1, opp_overlap 3516337 3516338 TGATTTTCGAGAAAA GCCTGGGCCG-CATCC TCG GCAAGTCGCCCCAGGC GCTGTTTCTGATTTT rnhB 3516959 - 3516366 - | RnhB TERM 3955 3516900 - 3516869 - G 74 -10 -3.58726 | overlap 3516854 3516870 CGGCCGCAGACACAA CCGGGCCGGCAAGG GGTC CCCTGCCGGCCTCA TCAACGCCTGCGATG TERM 3956 3516900 - 3516870 - G 79 -13.3 -2.75022 | gap 1, overlap 3516854 3516869 GGCCGCAGACACAAC CG-GGCCGGCAAGG GGTC CCCTGCCGGCCTCA TCAACGCCTGCGATG rplS 3517319 - 3516972 - | RplS HRM2_30970 3517931 - 3517374 - | hypothetical protein TERM 3957 3517843 - 3517800 - G 84 -2.4 -5.55769 | gap 1 TGTGACAACAAAAAA TCCACG-CACGCCAAAGGTAA TCG CTGCCCTTGCAATGTCGTGGA GATCAATGGTCGTCA TERM 3958 3517859 - 3517882 + g 70 -4.4 -4.63218 | GATCAATGGTCGTCA GGGCCGAGGC AATG GTCTCTCCCC TTTTATTGGAAACGG trmD 3518685 - 3517924 - | TrmD rimM 3519203 - 3518685 - | RimM TERM 3959 3519147 - 3519109 - G 95 -11.9 -4.18197 | opp_overlap 3519108 AGCCCGGATTTAAAA GTTTCTAAAGATCCGGC AAATG ACCTGACCTTTAGAAAC CCTTTTAACCCGTGT HRM2_31000 3519438 - 3519208 - | hypothetical protein rpsP 3519744 - 3519490 - | RpsP ffh 3521084 - 3519759 - | Ffh TERM 3960 3520323 - 3520310 - G 74 -9.5 -3.64703 | opp_overlap 3520309 3520293 CGGCTTTGATGGAAA GGGCG GCCC CGCCC CTTGCATCACCATCC TERM 3961 3520439 - 3520456 + g 85 -3.5 -5.44119 | gap 1, opp_overlap 3520437, overlap 3520439 3520440 CGGCCACAAGAAGCG T-CTCAAC CGG GTTGAGCA TTTTTTTAAGCTCGA TERM 3962 3521174 - 3521159 - H 87 -4.6 -5.5074 | TAAGTCAAGAAAAAA GCGTTG TCTA CACCGC ACCCAGGCAGGGATT TERM 3963 3521234 - 3521247 + H 75 -2.3 -5.40072 | GGAAAATTTAATTTC TCACC CCAT GGAGA TTTTTTTGAAAGAGA TERM 3964 3521706 - 3521696 - g 86 -8.2 -4.64861 | overlap 3521697 CCTTGCCAAAAGAAA GGCG CAA CGCC CCCTGTCAAACATTG HRM2_31030 3521253 - 3522290 + | putative SAM-dependent methyltransferase HRM2_31040 3523465 - 3522464 - | putative tRNA, (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 3965 3523213 - 3523235 + g 70 -4.8 -4.61231 | TGCAGGGATTCATAT TCTTCCCGTA ACC TGCCGGAGGA TTTTTCAACATCTCA TERM 3966 3523419 - 3523438 + g 91 -2.8 -5.69023 | gap 1, overlap 3523421 TCAAGCCCTCCTGAG GTGA-GCCC CAG GGCCCTCAC TTTTTTTAATGTTTT HRM2_31050 3524104 - 3523466 - | hypothetical protein HRM2_31060 3525523 - 3524150 - | predicted multidomain protein (response regulator receiver domain (N-terminal) / ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component, C-terminal) ntrB 3526492 - 3525599 - | NtrB TERM 3967 3525702 - 3525673 - GR 71 -5.7 -4.31329 | overlap 3525689 GCAAAAACCCCAAAA TGCCGATGGCGAT AATC ATGGCCATGAGCA CGTCATAGGACATGG ntrA 3527630 - 3526425 - | NtrA ntrC2 3528394 - 3527627 - | NtrC2 HRM2_31100 3529252 - 3528398 - | predicted ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component TERM 3968 3529211 - 3529222 + g 73 -5.8 -4.58395 | TTTCAGCAGACCGAT CCTG AAAA CAGG TTTTTCACCCATGCC ubiB2 3531128 - 3529431 - | UbiB HRM2_31120 3531461 - 3531132 - | hypothetical protein TERM 3969 3531384 - 3531398 + g 83 -2.8 -5.40072 | overlap 3531386 CGCAAACTCCCGGGC CAGATC TTC GATCTC TTTTTTTGACCGCAG acd10 3533332 - 3531485 - | Acd10 TERM 3970 3531725 - 3531694 - G 76 -11.6 -3.28712 | gap 1, overlap 3531677 CCGCCTTTTTGACAA GCTTTGGCGCAGCCA CCA TGGCC-CGCCACAGC AGCATCCAGGCCATG TERM 3971 3534861 - 3534838 - g 79 -7.4 -4.57353 | opp_overlap 3534843 3534855 3534858, overlap 3534839 GGGTATCAGATAAAA CCCCGGAAGA TTCT TCTTCTGGGA GGACCTGCCCGATTT TERM 3972 3534855 - 3534873 + G 73 -3 -5.03314 | opp_overlap 3534839 3534838, overlap 3534858 CCGGAAGATTCTTCT TCTGGGAG GAC CTGCCCGA TTTTTTGCACCTGAA TERM 3973 3535033 - 3535013 - g 73 -5.3 -4.69326 | opp_overlap 3535012 3535013, overlap 3535014 ATACGGAACAGAAAA TCGCCTCAG CAC CTGAGGAGG ATTTCAGCGCACCCA HRM2_31140 3533602 - 3535326 + | putative hydantoinase/oxoprolinase family protein TERM 3974 3535770 - 3535750 - g 72 -3.9 -4.87273 | overlap 3535751 AACACGGCATAAAAA GGGTAGCCA TTG TGGATACCG ACTGCCACCACGGTG TERM 3975 3535862 - 3535874 + G 70 -9.1 -3.5764 | CGGACGCACCCTCTA TCCCG GAA CGGGA TTTCCCCATGAACTT HRM2_31150 3535320 - 3536630 + | putative histone deacetylase family protein TERM 3976 3536663 - 3536702 + G 91 -9.2 -4.82901 | gap 1, opp_overlap 3536662, overlap 3536665 TGTTTTCAGACAGAC TGGCTG-GCCGGGCCCGGA TCG TCCAGGCCATGCGCAGCTA TTTTTATGACCAGGA TERM 3977 3536665 - 3536700 + G 80 -9.6 -4.03995 | gap 1, opp_overlap 3536662, overlap 3536663 TTTTCAGACAGACTG GCTG-GCCGGGCCCGGA TCG TCCAGGCCATGCGCAGC TATTTTTATGACCAG lysS2 3536647 - 3537546 + | LysS2 HRM2_31170 3537972 - 3537559 - | hypothetical protein TERM 3978 3538064 - 3538030 - R 100 -13 -5.41746 | opp_overlap 3538029 3538033 AACGGGGTAAAAAAA GAGGGGGTTTTCCC TTATTTT AAGAAAACCCCCTC CTCCGTTTTATTCAC sat2 3539388 - 3538111 - | Sat2 TERM 3979 3539578 - 3539588 + r 70 -5.4 -4.4388 | CGTGATTGGCTTTTT TGTC AAG GACA TTTATTGATTTATAT HRM2_31190 3540222 - 3539590 - | putative HAD-superfamily hydrolase (subfamily IA protein) TERM 3980 3540242 - 3540264 + r 72 -9.2 -3.13743 | opp_overlap 3540259, overlap 3540263 TGTACCTTCCTCATG GGGCAGTT GACTGCA AACTGCCC TTGGCTGTAAGGTTT HRM2_31200 3540560 - 3540237 - | hypothetical protein HRM2_31210 3540956 - 3540741 - | hypothetical protein HRM2_31220 3541779 - 3541153 - | putative metallo-beta-lactamase family protein nusB 3542207 - 3541776 - | NusB TERM 3981 3542133 - 3542117 - G 70 -2.1 -5.01732 | overlap 3542104 3542119 AATTGCTGCAAAAAA GTGCGAG CAA CTCGTCC GGACTGCCCTTGTCC ribH 3542686 - 3542213 - | RibH ribAB 3543922 - 3542717 - | RibAB ribE 3544609 - 3543941 - | RibE TERM 3982 3544482 - 3544500 + g 73 -3 -4.91712 | overlap 3544483 AGACAGGCACCATTG ACGGCAAT GGA ATCGCCGA TTTTTGTACCTTCAA ribD 3545769 - 3544624 - | RibD HRM2_31280 3546226 - 3545729 - | hypothetical protein HRM2_31290 3546726 - 3546223 - | hypothetical protein glyA 3547933 - 3546683 - | GlyA TERM 3983 3547231 - 3547248 + gr 71 -9.1 -3.25896 | overlap 3547237 ACAGAATCAATCCCC CCCTGGG TCCC CTCAGGG TCTTGTGGGTGGTGG TERM 3984 3547417 - 3547444 + gr 100 -9.8 -4.56597 | GGGGATAGGCACTGG CACCGGCCACAA TCAA TTTAGGCCGGTG TTTTTCGGCAAGGGC rpiB 3548415 - 3547957 - | RpiB TERM 3985 3548425 - 3548436 + r 90 -4.4 -5.69473 | ATCCATAAGATCCGT TCCT TGTT AGGA TTTTTTTCTAATGTA acpP 3548664 - 3548431 - | AcpP TERM 3986 3548597 - 3548558 - G 70 -9.3 -3.50715 | gap 1, opp_overlap 3548561 3548566, overlap 3548547 3548561 ACAAGGGCCAGAGAA TCAGCCCCGAGGTCATCC ACCAG GGACG-CCTCGGGGATTA CATCTTCAATATCCA TERM 3987 3548594 - 3548561 - G 73 -11 -2.89 | gap 1, opp_overlap 3548561 3548566, overlap 3548547 3548558 AGGGCCAGAGAATCA GCCCCGAGGTCATCC ACCAG GGACG-CCTCGGGGA TTACATCTTCAATAT rpmF 3548894 - 3548709 - | RpmF TERM 3988 3549157 - 3549171 + G 73 -2.7 -4.9445 | ATCTTCATATCGGAG GCGCC AGAAC GGCCC TTTTTAATTGGTTGT TERM 3989 3549867 - 3549853 - g 71 -5.6 -4.4891 | opp_overlap 3549855, overlap 3549854 GTGAGTATCAGAAAA TGGGCA TCC TGCCCG ACGCCATTCTCAACT TERM 3990 3550170 - 3550184 + G 77 -10 -3.79419 | overlap 3550163 3550168 CTGGTGGAGATGGCC GAAGCG GCC CGCTTC TATTTTGTCGACACC gltX 3549099 - 3550490 + | GltX TERM 3991 3550537 - 3550557 + T 77 -11.1 -2.82623 | overlap 3550535 GTATTCCGGCAACCG GCGGAAGGT ATT ACCCTCCGC TCATTCTCGCAGCCC HRM2_31350 3552032 - 3551058 - | putative dioxygenase hypB 3552661 - 3551999 - | HypB TERM 3992 3552093 - 3552082 - GR 70 -7.2 -3.79633 | overlap 3552080 CAGAAAGCGAAAACA CGGG CATT CCCG GATGAATCTCGGCCA hypA 3553068 - 3552721 - | HypA HRM2_31380 3554254 - 3553070 - | putative aspartate/tyrosine/aromatic acid aminotransferase TERM 3993 3553187 - 3553175 - G 73 -9.1 -3.80841 | ACCAGGACCACCAAA TCCGG TTC CCGGA ACGGCCAGGATCAAC tgt 3555370 - 3554258 - | Tgt queA 3556436 - 3555378 - | QueA TERM 3994 3555586 - 3555604 + g 80 -10.2 -3.72695 | TCGCACACGCCGCTG CCGGGGTG GAT CAGCCCGG TTTCATCGGCACCAT TERM 3995 3555867 - 3555891 + g 83 -12.7 -3.55444 | opp_overlap 3555860 AAAATGAAGCCCGGC CGTGGGGGCGG CAA CGGCCCCCTCG TTTGCGGCATAAACG TERM 3996 3556206 - 3556216 + g 80 -2.4 -5.42259 | opp_overlap 3556206 CATCACCTCTATAAC CCCC CCC GTGG TTTTTTTACCCATGA TERM 3997 3556311 - 3556330 + g 74 -3.5 -4.96848 | overlap 3556309 CAGATCCTGGAACCC GTGGTGG GTCACA TCACCGC TTTTTCTGTCAAGGC HRM2_31410 3556627 - 3556436 - | hypothetical protein TERM 3998 3558263 - 3558243 - g 72 -3.9 -4.79223 | overlap 3558246 3558256 CCAGATCATGAAAAA GAGCCGG GGTAAAG CCGACCC CAAGATCGTCACCCA gatB 3556873 - 3558303 + | GatB HRM2_31430 3558328 - 3559122 + | hypothetical protein TERM 3999 3559177 - 3559152 - T 100 -12.7 -5.03747 | gap 1, opp_overlap 3559152 AAACCCGTTAAAAAA GCCCTGGAAGAT TTT ATCT-CCAGGGC TTTTTTTACTTAACT TERM 4000 3559152 - 3559177 + T 100 -12.7 -5.64006 | gap 1, opp_overlap 3559152 AAACCCGTTAAAAAA GCCCTGGAAGAT TTT ATCT-CCAGGGC TTTTTTTACTTAACT HRM2_31440 3560664 - 3559210 - | hypothetical protein TERM 4001 3559329 - 3559342 + g 79 -6.7 -4.74801 | opp_overlap 3559318 3559328, overlap 3559318 GATAGGCGGCAACAG CCTTG TATT CAAGG TTTTTCGTAAGCTTC TERM 4002 3560895 - 3560870 - R 100 -17.7 -4.57581 | opp_overlap 3560870 ATTCTAAATAATAAA GCCCTGGAAGA TTTC TCTTCCAGGGC TTTTTGCCTGATCAA TERM 4003 3560870 - 3560895 + r 100 -17.7 -4.68593 | opp_overlap 3560870 ATTCTAAATAATAAA GCCCTGGAAGA TTTC TCTTCCAGGGC TTTTTGCCTGATCAA HRM2_31450 3562382 - 3560928 - | hypothetical protein TERM 4004 3561635 - 3561588 - G 70 -8.5 -3.65542 | gap 1, overlap 3561586 3561589 3561605 TTTACCTTCAAAATA GGGTGCAAGGAGAAAAACCTGT CCCTC ACAGGTCTGCCCCCTTGT-CCC AAAAACAGTCAATGC TERM 4005 3561619 - 3561605 - G 81 -5.7 -4.98255 | overlap 3561588 3561589 3561586 GTGCAAGGAGAAAAA CCTGT CCCTC ACAGG TCTGCCCCCTTGTCC HRM2_31460 3563975 - 3562692 - | hypothetical protein TERM 4006 3563687 - 3563713 + g 77 -10.8 -3.53012 | opp_overlap 3563681 TCCGGAAAACCGCCC CCGCTGCAACCG GCC CGGTTACAGCCG TTTGAGACAGGGCGG TERM 4007 3564471 - 3564439 - R 100 -15.6 -5.75599 | GAAACGACAAAAAAA GGCCGACCAGGAAA TCTTG CTTCCCGGCCGGCC CAAATTTCACTCAAC HRM2_31470 3565690 - 3564512 - | hypothetical protein HRM2_31480 3565733 - 3565828 + | hypothetical protein HRM2_31490 3566031 - 3567563 + | hypothetical protein TERM 4008 3567601 - 3567565 - T 88 -10.8 -3.76492 | opp_overlap 3567564, overlap 3567566 GGGAATTCTACTAAA CGGCGTGGCTGGAGCA GGATA TGCTCCAGCCGCAACA ATTAATGAAACGCCC TERM 4009 3567600 - 3567566 - T 83 -12.1 -2.85574 | opp_overlap 3567564, overlap 3567565 GGAATTCTACTAAAC GGCGTGGCTGGAGCA GGATA TGCTCCAGCCGCAAC AATTAATGAAACGCC mutL 3569598 - 3567682 - | MutL TERM 4010 3568116 - 3568142 + g 91 -4.2 -5.59564 | opp_overlap 3568111 GCACAACAAGGCTCT GGGAGGGCGGCC GGT GGTTGTCCGACC TTTTTTTCAATTTCT TERM 4011 3568880 - 3568931 + g 70 -2.8 -4.87318 | gap 1, opp_overlap 3568844 3568894 AACAAGGGGTCCACA GGGTCGGACAGAAAGCCGGTGATGG CGA TC-TCATCGGCCACAAGTTCGACCC TTTTTAGATTTTCAA TERM 4012 3569063 - 3569046 - G 80 -10.5 -3.68366 | overlap 3569042 TGAGGCGAAAACCAA CCCCGGG ATTT CCCAGGG CCATACCGGAAAAAA TERM 4013 3569413 - 3569391 - G 70 -8.5 -3.68222 | gap 1, opp_overlap 3569396 GCTCAATGGCAAGAA GGGCATTGTC CGGG GACA-TGCCC GAACCATTGTCCGAA HRM2_31510 3569787 - 3569605 - | hypothetical protein gatA2 3571281 - 3569809 - | GatA2 gatC 3571581 - 3571294 - | GatC HRM2_31540 3572285 - 3571584 - | hypothetical protein argS 3573965 - 3572298 - | ArgS TERM 4014 3572580 - 3572591 + g 82 -7.2 -4.60889 | overlap 3572590 CAGCAACTCCCTGTT CCCG GCCC CGGG TTTTTCAGCCTCGTT HRM2_31560 3574435 - 3573974 - | hypothetical protein TERM 4015 3574354 - 3574383 + g 70 -2.8 -4.80882 | overlap 3574370 GGAGGGGCACAAAGG TTCCCGGATCAG ACTCTG CCGATTCGGAAA TTTTTAATCTGCCCT TERM 4016 3574806 - 3574832 + r 100 -12.3 -5.56264 | TTTTAAAAGTTTTAA GGCTCGACACT GTTTA GGTGTCGGGCC TTTTTTCTATTTAAA HRM2_31590 3576527 - 3574839 - | hypothetical protein TERM 4017 3576086 - 3576097 + g 74 -2.2 -5.10461 | overlap 3576084 CATAATCATCGAGCA TCCG GCGG TGGA TTTTTCTTGCCTCAA pgi 3578182 - 3576515 - | Pgi HRM2_31610 3578248 - 3578421 + | hypothetical protein TERM 4018 3578657 - 3578640 - g 76 -8.3 -4.1899 | overlap 3578641 TCATCGCATTTAAAA TGGGGGG GACA CCCCCCT GGGAGACAGGGATAA TERM 4019 3578656 - 3578641 - g 77 -11.8 -3.11073 | overlap 3578640 CATCGCATTTAAAAT GGGGGG GACA CCCCCC TGGGAGACAGGGATA TERM 4020 3579035 - 3579010 - g 73 -9.1 -3.78778 | overlap 3579022 3579023 3579026 TGACCAGATGAATAA CCCTGAACAAA ACGA TTCGTTCAAGG CGATCCTCCTCAAAC HRM2_31620 3578411 - 3579775 + | putative aspartyl aminopeptidase TERM 4021 3579933 - 3579923 - g 100 -3.2 -6.32017 | AACAAACAAAAAAAA GATC CTC GACC AATGGTTTGATGCCA TERM 4022 3580038 - 3580013 - g 72 -9.7 -3.428 | overlap 3580007 3580006 3580014 AAATAAATTTGACAA CCCCGTGGGTG CTGC CACCCACGAAA GCCTTGAAGCTGTTT TERM 4023 3580037 - 3580014 - g 70 -11 -2.64595 | overlap 3580007 3580006 3580013 AATAAATTTGACAAC CCCGTGGGTG CTGC CACCCACGAA AGCCTTGAAGCTGTT HRM2_31630 3579873 - 3580385 + | hypothetical protein TERM 4024 3580436 - 3580402 - f 100 -14.4 -3.76413 | opp_overlap 3580433, overlap 3580404 TCGCAAAATTTTAAA CAGGCCCAATAAGGTT CCA AACCTTACCGGGCCTC AATAGTGAGGTGGTT TERM 4025 3580434 - 3580404 - f 100 -17 -3.46106 | opp_overlap 3580433, overlap 3580402 GCAAAATTTTAAACA GGCCCAATAAGGTT CCA AACCTTACCGGGCC TCAATAGTGAGGTGG TERM 4026 3580478 - 3580490 + G 76 -3.3 -5.1286 | CAAAAGTACATGTTA CCCCT GAC AGGCG TTTTTCTGCTTTTTC TERM 4027 3580859 - 3580813 - g 76 -2.9 -5.06735 | gap 1, opp_overlap 3580845 3580850, overlap 3580807 CAGAAATGAGAAAAA CAAGATCACCTACTCCTGGGAA ATCT TTCTCTGG-GTGGGCGCCCTTG CCTTTCATTACGCAT hmeC 3580457 - 3581464 + | HmeC hmeD 3581468 - 3583114 + | HmeD hmeE1 3583101 - 3583502 + | HmeE1 hmeE2 3583499 - 3584323 + | HmeE2 TERM 4028 3584601 - 3584575 - g 74 -4.5 -4.8269 | gap 1, opp_overlap 3584575 3584578 3584585, overlap 3584565 3584577 3584585 CACAACTATGAAAAA TTC-CACAGGAT CACC ATCCTGGGTGAA TTTCTGGCCGTTGCA hmeB 3584335 - 3585492 + | HmeB TERM 4029 3585524 - 3585549 + F 100 -20.5 -6.06723 | opp_overlap 3585519 3585518 TTAGTTAAACCTGGA GCGGGGATGCC ACAC GGCATCCCCGC TTTTTTTTTACCCAG HRM2_31690 3585635 - 3586240 + | hypothetical protein rplU 3586410 - 3586721 + | RplU rpmA 3586750 - 3587004 + | RpmA TERM 4030 3587679 - 3587690 + G 73 -5.8 -4.59109 | CATGAAGGCACAGGT CTGG GCAT CCAG TTTTTAAAACATGTG TERM 4031 3587925 - 3587879 - g 71 -5.8 -4.30014 | overlap 3587897 CGGATCAATGGAAAA GGTTGAACAATTCAAAAAGGCC TAT GGCACTGGTGAACTGCTCACCC TGTCAGCTGCCACAG HRM2_31720 3587001 - 3588038 + | putative GTP-binding protein proB 3588025 - 3589164 + | ProB TERM 4032 3589621 - 3589632 + G 78 -5.8 -4.82901 | opp_overlap 3589602 GCCATTCTCAGGGGC GGCT CAGA AGCC TTTTTCTCGAACACC TERM 4033 3590163 - 3590149 - g 76 -7.8 -4.28049 | overlap 3590152 GTTAAAATCGTAAAA GACCTG GCC CAGGCC ATGGCGCACATTGCC proA 3589174 - 3590430 + | ProA TERM 4034 3590862 - 3590874 + G 74 -7.7 -4.17556 | opp_overlap 3590862 3590856 GAAAAAACAGGCAAA GGATG TTG CATCC TTTCTTCAAGATGTG HRM2_31750 3590440 - 3591102 + | putative nicotinate-nucleotide adenylyltransferase HRM2_31760 3591099 - 3591488 + | putative iojap-related protein gpmA2 3591507 - 3593042 + | GpmA2 TERM 4035 3593584 - 3593559 - g 100 -11.9 -5.95166 | CCCAACGAAAAAAAA GAGCGGGAGAT GATC ATCTTCCGCTC GTACAACATTGACAA HRM2_31780 3593109 - 3593624 + | hypothetical protein HRM2_31790 3594302 - 3593625 - | hypothetical protein TERM 4036 3594527 - 3594495 - R 100 -17 -5.38951 | opp_overlap 3594494 3594493 AATTCATACAAAAAA GGGCGGGCCCGGAA TGACT TCCCGGACCCACCC GATTATCGCATTTTG pcb 3596623 - 3594572 - | Pcb HRM2_31810 3596906 - 3596685 - | hypothetical protein pccB 3598469 - 3596916 - | PccB coaE 3599257 - 3598616 - | CoaE TERM 4037 3599342 - 3599322 - R 70 -2.5 -5.06414 | opp_overlap 3599300 TTTTCCGAAGAAAAA CCGTTTCAA GGA TTGACAAGG GTGAATTTCCAGGCG HRM2_31840 3600076 - 3599327 - | hypothetical protein fusA4 3600317 - 3602350 + | FusA4 HRM2_31860 3603799 - 3602330 - | TPR domain family protein TERM 4038 3603188 - 3603178 - G 74 -8.2 -4.11371 | overlap 3603179 CAAGACCGGTCAAAA GCCC CCT GGGC GAAAAAGAGGCGTCC HRM2_31870 3603958 - 3604716 + | putative chromosome partitioning protein ParA TERM 4039 3604760 - 3604744 - g 95 -2.2 -5.95286 | AGTAAAAAGAAAAAA CTGACA GGACT TGGCAG GGGAATTTCCGCCTT TERM 4040 3605334 - 3605319 - g 70 -4.7 -4.65916 | CGGATCTGAAGAAAA CCAGA TCAAGG TCTGG CTCAGAGTCGTGGAA TERM 4041 3605556 - 3605575 + G 82 -7.2 -4.61231 | gap 1 TAAGACCCGGGAGGA GTTCCAGCG CCT CG-TGGAAC TTTTTAACCGTCTGA HRM2_31880 3604726 - 3605595 + | putative chromosome partitioning protein ParB TERM 4042 3605932 - 3605912 - g 70 -3.3 -4.8269 | GACAATCATTAAAAA GCATACC GACCAGG GATATGC CTCCATCATCCTTGG ispH 3605592 - 3607295 + | IspH TERM 4043 3608260 - 3608247 - g 70 -8.1 -3.65902 | overlap 3608257 TTGATTTCAGGGAAA GGGGA AAAA TCCCC AGGGTGGCAGCCGAC TERM 4044 3608508 - 3608484 - g 73 -8.7 -3.72576 | opp_overlap 3608490, overlap 3608487 GCGTGCTGGATGAAA TTATAATCGAC AAT GTCGATTATGA GACCGGCCATATTGA TERM 4045 3608505 - 3608487 - g 70 -10.4 -2.96695 | opp_overlap 3608490, overlap 3608484 TGCTGGATGAAATTA TAATCGAC AAT GTCGATTA TGAGACCGGCCATAT TERM 4046 3608787 - 3608775 - g 73 -9.1 -3.72642 | opp_overlap 3608775 AATCAACCATCGAAA CAGGC GGT GCCTG TATCATCAATCAGGG TERM 4047 3609009 - 3608987 - g 95 -2.6 -5.93809 | overlap 3608989 GCCGGAGAAAAAAAA CAGAACCTGG AAG CCAAACTCAG AAGGGAACAGGAAAA TERM 4048 3609176 - 3609199 + G 70 -8.8 -3.55622 | opp_overlap 3609166 CAGGAGGCATCCGAG GCCCAGGAAG CGCT TTCCCTGGGC TTTGAAACCGTTGAA TERM 4049 3609345 - 3609311 - g 91 -4.2 -5.59564 | overlap 3609315 ATAAATTTAAAAAAA TGGACCAGGGAAAATC CCG GAATTGCCCTGGTGGA TGTCACCGGGTCCCT HRM2_31900 3607400 - 3609508 + | hypothetical protein HRM2_31910 3610418 - 3609495 - | putative 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 4050 3609548 - 3609561 + g 82 -6.7 -4.86731 | overlap 3609542 CGTCACGTATGGCAA GGATC TTGC GATCC TTTTCTTTCCACAAC HRM2_31920 3611936 - 3610443 - | sigma-54 dependent transcriptional regulator TERM 4051 3612219 - 3612235 + H 81 -9.3 -3.86897 | opp_overlap 3612220, overlap 3612220 TTATTAGGGCAGACC AGGGGCC ATT GGCCCCA TTTATAACAGATACA TERM 4052 3612234 - 3612220 - H 91 -12.8 -2.63913 | opp_overlap 3612219 3612220 TATTAGGGCAGACCA GGGGCC ATT GGCCCC ATTTATAACAGATAC TERM 4053 3612220 - 3612234 + H 95 -12.8 -2.91924 | opp_overlap 3612220, overlap 3612219 TATTAGGGCAGACCA GGGGCC ATT GGCCCC ATTTATAACAGATAC TERM 4054 3612671 - 3612637 - g 70 -10 -3.24188 | opp_overlap 3612637 3612649, overlap 3612640 GGAGATCAGCATGAA CAAGGCCATTGAGACC GTG GATCCCCATGGGCTTG TTCTCAGGGGCAACG TERM 4055 3614312 - 3614296 - g 76 -4.3 -4.91109 | overlap 3614311 GTTTGACCATAAAAA GGGCCTG ATC CAGAACC TGGGCGCCCTGGAAA TERM 4056 3616675 - 3616645 - g 100 -9.6 -4.88736 | CACCACCTACAAAAA GGCCAGGGAGAACA ACA TGCCCATCCTGGCC GAACTTAACGGGATC TERM 4057 3617207 - 3617193 - g 74 -11.4 -3.14468 | CGGCATCAGATTCAA CCGCTG TCA CAGCGG CCATTGACATCCAGG TERM 4058 3617288 - 3617276 - g 86 -3.3 -5.54264 | AAACAGGGAAAAAAA CAACG GAT CGTGG CCCTTGTTTCCGGAC TERM 4059 3617363 - 3617350 - g 70 -2.3 -4.91511 | overlap 3617332 ATTGTACGAGAAAAA TGCCG ACAT CCGCA GAACCATGGACCAGG TERM 4060 3617784 - 3617767 - g 76 -7.7 -4.37991 | overlap 3617772 CAAAAACAGCGAAAA CCAGACA GCGG TGTCCGG CAAGGCCGACGCCAT TERM 4061 3618902 - 3618878 - g 82 -4.1 -5.31877 | overlap 3618879 3618881 ATGCAGTATAAAAAA GCATCCACCGG AAC CCGGATGATCC CGGACGGATTTGCCC TERM 4062 3619743 - 3619713 - g 70 -8.2 -3.73224 | overlap 3619714 TCATGTCCCATGAAA CCTACACTCCGGCC CGG GGCGGCAGTGCAGA TGCTGAAGTGACGGC TERM 4063 3620204 - 3620193 - g 86 -5.8 -5.19328 | overlap 3620195 AGGCCACAATAAAAA CAGG CAGT CCTG CCCAGCAAGACATCC TERM 4064 3623265 - 3623245 - g 70 -4.7 -4.62069 | gap 1, overlap 3623249 CTCCCAGTTTAAAAA CCCA-GGC GGGGTT GCCATGGG TGCGCCAACCCGCCA TERM 4065 3623651 - 3623664 + G 70 -2.3 -4.96848 | CATGGAAAGGTTGAA AAGGG TAAA CCCTA TTTTTGTATCACCAC HRM2_31930 3612269 - 3623848 + | predicted polyketide synthase TERM 4066 3624578 - 3624564 - g 86 -5.6 -5.31456 | overlap 3624566 TCAAGGGAGAAAAAA CCCCTG TCA CAGTGG TGAGCAGGCCCCTCG HRM2_31940 3623852 - 3624658 + | putative phosphopantetheinyl transferase HRM2_31950 3624790 - 3625440 + | hypothetical protein pncA 3626110 - 3625454 - | PncA TERM 4067 3626068 - 3626094 + g 73 -5.1 -4.64766 | gap 1, opp_overlap 3626059 3626062, overlap 3626070 3626073 CGACAATCACCCCGG TGACA-GCCCGG GCAT CCGGGCTTGGTA TTTTTGACATATCCA TERM 4068 3626073 - 3626088 + g 82 -11.8 -3.60925 | opp_overlap 3626062, overlap 3626070 3626068 ATCACCCCGGTGACA GCCCGG GCAT CCGGGC TTGGTATTTTTGACA HRM2_31970 3626985 - 3626251 - | two-component response regulator HRM2_31980 3628082 - 3626952 - | two-component sensor histidine kinase TERM 4069 3627987 - 3627997 + gr 75 -8.2 -3.78934 | GATGGTCTGGTTACT CCCC GCC GGGG TTGTTCTCCCGGGAA HRM2_31990 3629238 - 3627982 - | predicted fusion protein, response regulator receiver (N-terminal) / sensor histidine kinase PAS/PAC (C-terminal) TERM 4070 3628234 - 3628224 - GR 79 -5.4 -4.96848 | opp_overlap 3628229 CCTGGTATACAAAAA GGAT TTG ATCC TGATCATTCTCCCTG HRM2_32000 3631234 - 3629231 - | predicted fusion protein, sensory box response regulator (N-terminal) / CheY-like response regulator receiver (C-terminal) TERM 4071 3631040 - 3631024 - G 73 -10.9 -3.29263 | ACAGGCGTTTGAGAA TCTCCAG CAG CTGGAGA CCGTCCATCTCAGGC TERM 4072 3631262 - 3631273 + r 71 -3 -4.96848 | opp_overlap 3631259, overlap 3631246 3631245 TGGATTTCAAAGCAG GAAT CCAG ATTC TTTTTATATAACCGG TERM 4073 3631297 - 3631285 - R 80 -10.5 -3.48395 | ATTCTTTTTATATAA CCGGC ATG GCCGG AACATGATATCTGCC HRM2_32010 3631480 - 3631277 - | hypothetical protein TERM 4074 3631386 - 3631374 - G 75 -10.5 -3.48593 | opp_overlap 3631366 GAGTGTTTCATATAA CCGGC ATG GCCGG AACATGATATCTGCC TERM 4075 3631475 - 3631463 - G 75 -10.5 -3.48593 | GAGTGTTTCATATAA CCGGC ATG GCCGG AACATGGTATCTGCC TERM 4076 3631688 - 3631654 - H 100 -11.7 -5.03715 | gap 1, opp_overlap 3631654 3631655 3631660, overlap 3631656 3631660 ACCATGGCCAAAAAA GATAAAGCCCTGAAAA TTAA TTTCCAGGGCTTTA-C ATTTATATAAACTCA TERM 4077 3631655 - 3631688 + H 73 -9.7 -3.02698 | opp_overlap 3631654 3631656 3631660, overlap 3631654 3631660 CCATGGCCAAAAAAG ATAAAGCCCTGAAAA TTAA TTTCCAGGGCTTTAC ATTTATATAAACTCA TERM 4078 3631687 - 3631656 - H 100 -15.4 -4.14633 | opp_overlap 3631655 3631654 3631660, overlap 3631654 3631660 CATGGCCAAAAAAGA TAAAGCCCTGAAAA TTAA TTTCCAGGGCTTTA CATTTATATAAACTC TERM 4079 3631683 - 3631660 - H 100 -11.8 -4.64992 | opp_overlap 3631660 3631655 3631654, overlap 3631656 3631654 GCCAAAAAAGATAAA GCCCTGAAAA TTAA TTTCCAGGGC TTTACATTTATATAA TERM 4080 3631660 - 3631683 + H 83 -9.6 -3.91402 | opp_overlap 3631656 3631654 3631660, overlap 3631655 3631654 GCCAAAAAAGATAAA GCCCTGAAAA TTAA TTTCCAGGGC TTTACATTTATATAA HRM2_32030 3631961 - 3632290 + | hypothetical protein HRM2_32040 3632322 - 3632630 + | hypothetical protein sigE 3632816 - 3633148 + | SigE TERM 4081 3633186 - 3633217 + F 100 -4.6 -6.17292 | gap 1, opp_overlap 3633186 AGTTTTTACTTGAAA CTTGAAAGGT-TCTG GGA TAGAAAACTTTCAAG TTTTTTTTTGCATTT HRM2_32060 3633282 - 3633647 + | cytochrome c, class III family protein rnfC2 3633718 - 3634998 + | RnfC2 TERM 4082 3635081 - 3635097 + G 71 -10.8 -3.09135 | overlap 3635093 GTGAACATTATCCTG GCGGCC CTGCC GGCCGC TATATTCGGCGTTCT TERM 4083 3635864 - 3635845 - g 71 -7.2 -3.96892 | gap 1, opp_overlap 3635839, overlap 3635848 AATCCTTATCAGAAA CAT-CGGGT CCT ACCCGGATG GCACTGTTTTTGCGA rnfD2 3634991 - 3635959 + | RnfD2 TERM 4084 3636196 - 3636186 - g 73 -3.2 -5.00616 | overlap 3636188 3636193 3636195 TTTGTCGGTAAAAAA GATG GAA CACC CGAAGCCATTGCCTT rnfG2 3635952 - 3636545 + | RnfG2 rnfE2 3636558 - 3637151 + | RnfE2 TERM 4085 3637275 - 3637298 + G 100 -9.6 -4.94902 | opp_overlap 3637273 AGAAAATGGAAACCG CAACGGGCAT GGGC ATGGCCGTTG TTTTTGTACTGGTTC rnfA2 3637163 - 3637738 + | RnfA2 TERM 4086 3639618 - 3639629 + G 78 -5.8 -4.82901 | GCAGAAGGGCTGCAA GGTC CATT GACC TTTTTCTCAAGGGAA HRM2_32120 3637814 - 3639886 + | putative NADPH-dependent glutamate synthase TERM 4087 3640003 - 3639984 - g 76 -5.8 -4.62872 | gap 1, overlap 3639989 AGGAACTGGTAAAAA TTCAAGAGC TTT GCTCT-GAA GAAGAGTTCCAGAGG HRM2_32130 3639914 - 3640411 + | putative cAMP-dependent protein kinase, regulatory subunit TERM 4088 3640423 - 3640446 + F 100 -16.8 -4.10552 | opp_overlap 3640413 3640423 GTAAACGTCTATCAA CGGGATCAGG CTTG CCTGATCCCG TTTAATTTCCTGCCA TERM 4089 3640446 - 3640423 - f 100 -16.8 -3.17714 | opp_overlap 3640423, overlap 3640413 GTAAACGTCTATCAA CGGGATCAGG CTTG CCTGATCCCG TTTAATTTCCTGCCA TERM 4090 3640996 - 3640980 - g 86 -6.5 -5.01732 | opp_overlap 3640994 AATTCTGTCAAAAAA GAGCGAC TCT GTCACCC TTGACCTTGGATCCA TERM 4091 3641424 - 3641399 - g 70 -2.5 -5.00616 | gap 1, opp_overlap 3641378 3641406 3641416, overlap 3641400 TGGCTCCGGAAAAAA GCC-TGGCCATT GTC AACGGCCTCGAC AATGTTGAGTGCCTT TERM 4092 3641416 - 3641437 + G 71 -7.3 -4.02817 | gap 1, opp_overlap 3641400 3641399, overlap 3641406 CTGGCCATTGTCAAC GGC-CTCGAC AAT GTTGAGTGCC TTATTGTTGTGCGGA apbE 3640471 - 3641499 + | ApbE HRM2_32150 3642395 - 3641469 - | predicted Fe-S oxidoreductase TERM 4093 3642858 - 3642847 - g 91 -4.4 -5.58074 | CAACGATGAAAAAAA TCGT TGAA ACGA CCTTGAACCTGGACT TERM 4094 3644380 - 3644368 - g 73 -10.5 -3.31144 | TTTTGATTGCCATAA CGGCC CTT GGCCG AAGATCTTCAACTTG gidA 3642513 - 3644396 + | GidA dnaJ5 3644473 - 3645384 + | DnaJ5 TERM 4095 3645508 - 3645522 + G 74 -3.6 -4.96848 | overlap 3645505 TACTTGCCGGAATCC TGAAAG GGT CTTTTA TTTTTCTATCCGACC hpt 3645393 - 3645908 + | Hpt TERM 4096 3646780 - 3646790 + G 83 -3.2 -5.40072 | opp_overlap 3646767 AAGCCCTGAACAACT TGCT GAC GGCA TTTTTTTGGACACCC HRM2_32190 3645926 - 3647539 + | putative ATPase TERM 4097 3647684 - 3647715 + T 100 -11.8 -4.67038 | gap 1, opp_overlap 3647684 3647680 CTACCATGAAATCAA GACTCCTGGAATGAT TCA AT-ATTCCAGGGGTC TTTTGCTTTTACGGC TERM 4098 3647715 - 3647684 - T 78 -9.6 -3.58162 | gap 1, opp_overlap 3647684, overlap 3647680 CTACCATGAAATCAA GACTCCTGGAATGAT TCA AT-ATTCCAGGGGTC TTTTGCTTTTACGGC TERM 4099 3647979 - 3647992 + T 74 -6.7 -4.38503 | CGGTCAGCCACTATT TAGGC TTAC GCCTA TTGTTTGTTATTTCA HRM2_32210 3648863 - 3648000 - | predicted alpha/beta hydrolase HRM2_32220 3650872 - 3649142 - | diguanylate cyclase (GGDEF) domain protein HRM2_32230 3651118 - 3652116 + | hypothetical protein HRM2_32240 3652120 - 3652299 + | hypothetical protein HRM2_32250 3652966 - 3652325 - | hypothetical protein HRM2_32260 3654293 - 3652971 - | predicted glycosyltransferase TERM 4100 3653341 - 3653354 + g 73 -3.1 -4.93318 | TTCTGCCGCGCCCAG GATGC ACCG GTATC TTTTTCTGCATTGTC TERM 4101 3654048 - 3654003 - G 100 -4.1 -6.00814 | gap 1 AAGAATTAAAAAAAA CAGCAGTGACAGGAAAAGCTCA ACA TAAA-TTCCCCTGAGACTGCTG AAAAGCAACAAAAGG TERM 4102 3654092 - 3654104 + g 76 -3.4 -5.08255 | opp_overlap 3654077 GGGCTGCCCCAAGGG CTGA GCGAA TCAG TTTTATTTTAAAGAT rnhA2 3655202 - 3654597 - | RnhA2 HRM2_32280 3656566 - 3655202 - | major facilitator family protein HRM2_32290 3656889 - 3656668 - | hypothetical protein HRM2_32300 3657308 - 3657811 + | putative ketopantoate reductase HRM2_32310 3658697 - 3657837 - | hypothetical protein TERM 4103 3658576 - 3658591 + g 91 -5.4 -5.40072 | gap 1 TTCATGTCCATGACG GCCATGG CTG CCA-GGC TTTTTTTAAGCACAG HRM2_32320 3658831 - 3659391 + | putative fusion protein, conserved hypothetical protein (N-terminal) / apoptosis inhibitory protein 5-related protein (C-terminal) HRM2_32330 3659486 - 3659788 + | hypothetical protein TERM 4104 3659831 - 3659786 - T 70 -7.6 -3.58726 | gap 1, overlap 3659771 3659795 TCTTCTGACACAGAA TAGGCACA-ACGGGGGCAGAC GTAAA ATCTGCCCCCGCACATTCCCA GCAAAGCCAATTTAC TERM 4105 3659821 - 3659795 - T 100 -15.9 -3.44362 | overlap 3659786 ACAGAATAGGCACAA CGGGGGCAGAC GTAAA ATCTGCCCCCG CACATTCCCAGCAAA ligA2 3660702 - 3659854 - | LigA2 TERM 4106 3660500 - 3660482 - G 85 -3.8 -5.40072 | overlap 3660483 3660485 3660486 GGCGCTGCAAAAAAA TTATCCCC CCG GGAGATCA ACCGCCTGCCATCCC TERM 4107 3660669 - 3660656 - G 70 -3.1 -4.86385 | gap 1, overlap 3660658 AGCGTCAAAAACAAA GCCATG GCG CA-GGC AATGAAACATTTAAA TERM 4108 3660712 - 3660691 - G 100 -2.9 -6.13 | ACATTTAAAAAAAAA GGATCTTTC CATG GAATGAACC TCCAAAAATTAATAC HRM2_32350 3662106 - 3660781 - | hypothetical protein TERM 4109 3661107 - 3661132 + g 73 -10.3 -3.33261 | GGGGAAGTGATCGTT GGGGAAGGACG ATAT CGTCCAGCCCC TTGTCAGCCTTGAGA TERM 4110 3663762 - 3663790 + G 70 -11.1 -2.52623 | gap 1, overlap 3663759 3663762 GCCAGGAGGCAGTGA CGTCCATGGGTG ATGATG CACCCATGG-CG GTATTGTCCACCCAG TERM 4111 3664187 - 3664170 - g 70 -2.7 -4.78764 | overlap 3664173 3664177 GAAATGTATCAAAAA CACGAAT CCCC ATTCCTG CTGCAATGGCGGTTG TERM 4112 3666309 - 3666325 + G 76 -12.3 -2.87344 | overlap 3666312 CCTGTTTGTACGGGG CAACCGG AGG CCGGTTG TATGTGGCAGGCATG gltB2 3662309 - 3666772 + | GltB2 gltD2 3666784 - 3668214 + | GltD2 TERM 4113 3668322 - 3668294 - T 100 -16.7 -3.8211 | opp_overlap 3668294, overlap 3668295 TTTCACCCAGAAGAA TCGGGACAGGACC AAG GGCCCTGTCCCGG TTAATGGAGGAAAAA TERM 4114 3668294 - 3668322 + T 100 -16.7 -3.14132 | opp_overlap 3668294 3668295 TTTCACCCAGAAGAA TCGGGACAGGACC AAG GGCCCTGTCCCGG TTAATGGAGGAAAAA TERM 4115 3668321 - 3668295 - T 100 -20.2 -2.88945 | opp_overlap 3668294, overlap 3668294 TTCACCCAGAAGAAT CGGGACAGGACC AAG GGCCCTGTCCCG GTTAATGGAGGAAAA HRM2_32380 3669249 - 3668344 - | hypothetical protein TERM 4116 3669380 - 3669362 - H 75 -2.4 -5.37593 | CTTCAAATTAAAAAA CAAAATGA TCA CCATATTG AAAATAAATATCAAC TERM 4117 3669583 - 3669571 - H 80 -10.5 -3.44319 | TTGAATTGACTATAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 4118 3670620 - 3670600 - g 100 -7.5 -6.02914 | GCCATACAAAAAAAA GACCCTCTC TGC GTGAAGGTC CTGGGCATGTTCACC glk 3669877 - 3670878 + | Glk TERM 4119 3671000 - 3670970 - T 100 -19 -3.9243 | overlap 3670958 GAACTCTTGAAAGAA CCGGGACAGAACCC AGA GGGACCTGTCCCGG TCAATGGAAAAAAGA fumA 3672630 - 3671020 - | FumA sdhB 3673377 - 3672643 - | SdhB sdhA 3675347 - 3673377 - | SdhA TERM 4120 3674988 - 3675011 + g 73 -3 -5.00884 | overlap 3674990 GGTAACCTTTTTACC GTTGATCACC ACCT GGCGATCGCC TTTTTTCACCCGGCT sdhC 3676283 - 3675351 - | SdhC TERM 4121 3675830 - 3675810 - G 74 -4.8 -4.80178 | gap 1, overlap 3675812 3675813 CATGAACGAAGAAAA TACCCTGTC GGAC GACAG-GTA GGGGTCAATCTGGCC sucD2 3677256 - 3676387 - | SucD2 TERM 4122 3676475 - 3676520 + g 79 -12.5 -3.14132 | GCTTCAATCTTGGCC TGGCCCGTGCCACTGCCACCA CTGA TGATGGCACCGGCATGGCCCA TTCGTCGGCCCGGGG TERM 4123 3677083 - 3677107 + g 72 -9.9 -3.49209 | overlap 3677102 3677103 CTGCTCGACCGCCTC GGCCACGGTGT TGA ACACCGGGACC TTGTCCATTTGCTGT TERM 4124 3677336 - 3677348 + r 80 -10.5 -3.48924 | CTTCGTTAACTCGCT CCGGC CGT GCCGG TTATATGGCGGCTGC sucC1 3678506 - 3677349 - | SucC1 TERM 4125 3678048 - 3678069 + g 76 -11.6 -3.32807 | overlap 3678068 ATACCCCTGGATTCC GGTGAGGG GATCAA CCCTCACC TTGATAATCTTTTCA TERM 4126 3678199 - 3678221 + g 73 -2.7 -5.0538 | gap 1, overlap 3678199 AGTTCCTTTGCAATC TT-CTGGCCG GCTT CGACCAGCAA TTTTTTCACCTCACG TERM 4127 3678573 - 3678551 - R 100 -11.3 -3.98907 | gap 1 TAAAAACGACAACAA CGCC-TCGGC TGCA GCCGAAGGCG ATATCAACTCCTGTT argK 3679516 - 3678533 - | ArgK sbm 3681648 - 3679525 - | Sbm TERM 4128 3681348 - 3681364 + g 79 -6.5 -4.62069 | opp_overlap 3681342 CCACTGAAAGACCTT TCTGGCC GGC GGCGAGA TTTTTGCGATAAAAG HRM2_32480 3682098 - 3681694 - | glyoxalase/dioxygenase/bleomycin resistance family protein HRM2_32490 3683486 - 3682338 - | CoA-transferase family III protein TERM 4129 3683111 - 3683126 + g 70 -10.4 -2.89191 | opp_overlap 3683101 CATCATGCCCGACCC GGTCCC GCAT GGGACC TGTCTGGCCATATCC TERM 4130 3683910 - 3683924 + G 74 -10 -3.53012 | overlap 3683891 3683890 CCGAACAGATCGGCG GGGTGT TTG ACACCC TTTCCCGCCACACCA TERM 4131 3684178 - 3684161 - g 85 -4.1 -5.48213 | CATGTAAAACAAAAA CTGGTCA AACG TCACCAG ACCCTGTTCTTTTCG TERM 4132 3684490 - 3684472 - g 83 -8.8 -4.431 | overlap 3684473 CATCCACGGAGAAAA GGACCAGA CAC TCAGGTCC CTGGTCATGCAGCGG HRM2_32500 3683636 - 3684871 + | predicted ATP-dependent RNA helicase TERM 4133 3685116 - 3685152 + T 74 -9.9 -3.08046 | overlap 3685115 TATTATGCCGCCCCC GGCGGGCGATGGGACCG GCC CGGGACCGTCGGCGGCC CTTTTGCCCTGCCGG TERM 4134 3685339 - 3685327 - T 78 -10.5 -3.29511 | overlap 3685328 TGCATTTTCTTATAA CCGGC ACG GCCGG AGCGAGTTATGGCTC TERM 4135 3685365 - 3685328 - T 71 -9.7 -2.57564 | overlap 3685327 GCATTTTCTTATAAC CGGCACGGCCGGAGCGA GTTA TGGCTCCGGCCTCAACG AATTTTGAAACGCCT TERM 4136 3685728 - 3685716 - T 100 -10.5 -4.52589 | GTGTTTCATATAAAA CCGGC ACG GCCGG AACGAGGTATGGTTC TERM 4137 3685848 - 3685813 - T 93 -2.5 -5.96219 | gap 1, overlap 3685814 CATGTATAAAAAAAA GGTTATAGGCCGGGTG GCGTG CACACGGCCT-TGACA TGGTAATAGCTTGAA HRM2_32510 3687167 - 3685815 - | serine/threonine protein kinase TERM 4138 3686479 - 3686461 - G 83 -3 -5.40072 | overlap 3686463 GCCCGGTCAAAAAAA TCGTCCCA TGT CGGGTCAA GATCGGAATTAAGCT HRM2_32520 3687922 - 3687173 - | serine/threonine protein phosphatase TERM 4139 3687646 - 3687662 + g 76 -4.3 -5.00616 | opp_overlap 3687639 3687637, overlap 3687637 GTAGAAGATGGGACC GGGTGTG GTC CGCAGCC TTTTTTGCAACAGGA HRM2_32530 3690727 - 3687947 - | predicted fusion protein, periplasmic substrate-binding protein (N-terminal) / sensory box regulatory protein (C-terminal) TERM 4140 3688490 - 3688502 + g 78 -6.2 -4.77036 | opp_overlap 3688471 CAGACCAAGACCTGT GCCC TCTCC GGGC TTTTTGGTGGTAAAA TERM 4141 3688685 - 3688697 + g 75 -9.1 -3.86822 | opp_overlap 3688684 3688681 CCCGGTGGAAACCAT CGCCT GGA AGGCG TTTGTGCAAAGATTC TERM 4142 3689384 - 3689419 + g 93 -4 -5.83822 | gap 1 TTCAGAGGTAATATA TACCGGTTCTTTCATGG ACC CCATGATGGC-CTGGTA TTTTTTTTCACTCTC TERM 4143 3689855 - 3689865 + g 70 -3.2 -4.76892 | CGCCAGCTCATCGGA CAGT CGT GCTG TTTTTCCCTTAATCT cysA 3691862 - 3690828 - | CysA TERM 4144 3691645 - 3691663 + g 80 -2.2 -5.39905 | overlap 3691644 3691645 TACACGATGCCAAGG CCCCGGTG TTC CGGAGGGG TTTTTGTTATTTCCT cysT 3692647 - 3691859 - | CysT HRM2_32560 3693680 - 3692700 - | putative sulfate transport system, substrate-binding protein TERM 4145 3693426 - 3693441 + g 73 -3.2 -5.02074 | CTTGTAGTCGGCAGA GGCC ATGATGTC GGCC TTTTTTCCAACCTCA TERM 4146 3693735 - 3693698 - R 81 -7.1 -4.58663 | opp_overlap 3693710, overlap 3693699 3693700 ATTACTCCTTAAAAA TTGGGTTGTAAATAAGC TATG GCTTATTTAAACCCCCA ACGAAAGTCAATCAT TERM 4147 3693732 - 3693700 - R 80 -11.6 -2.60508 | gap 1, opp_overlap 3693710, overlap 3693699 3693698 TACTCCTTAAAAATT GGGTTGTAAATAAGC TATG GCTTATTTA-AACCC CCAACGAAAGTCAAT plsC 3694549 - 3693809 - | PlsC TERM 4148 3694488 - 3694475 - G 70 -2.3 -5.01732 | overlap 3694476 AACCCCGTGAAAAAA GGTCG ATAG CGACA TAAGGGGAAATACAA HRM2_32580 3695548 - 3694577 - | hypothetical protein HRM2_32590 3697785 - 3695554 - | predicted ABC-type transport system, membrane protein TERM 4149 3695593 - 3695583 - G 74 -4 -5.0133 | opp_overlap 3695574 3695583 GATCTGTTGAAAAAA GATT TTT AATC CGTTGTTTTCTTGAC TERM 4150 3695657 - 3695643 - G 70 -4.2 -4.6971 | TAAACCCGAATAAAA TGACCA GGA TGGGCA GGCCGGCAATATTGA HRM2_32600 3698506 - 3697802 - | predicted ABC-type transport system, membrane protein HRM2_32610 3699478 - 3698510 - | ABC-type transport system, ATPase component TERM 4151 3698621 - 3698611 - G 70 -8.2 -3.76839 | GAAGGGCAAGGTAAA GGGC TTT GCCC GCATCATAATCATCG HRM2_32620 3700128 - 3699553 - | hypothetical protein HRM2_32630 3703031 - 3700410 - | putative two-component hybrid sensor and regulator protein TERM 4152 3700487 - 3700458 - G 80 -12.3 -3.36505 | opp_overlap 3700449 ATACCTCAGGTACAA TTTGTCCTGTTCA TCCA TGAACAGGTCAAA CAGTTCAGGATCAAA TERM 4153 3701396 - 3701413 + g 83 -2.7 -5.40474 | overlap 3701398 TAAGAATAACCCCCT TGGAATC TTCT GGTTCTA TTTTTTTGACACGGT TERM 4154 3701827 - 3701842 + g 83 -3.2 -5.40072 | overlap 3701828 GTGTCTTTAACGGTA ATGACC AGCC GGTCAC TTTTTTTCAGCAAGG TERM 4155 3702724 - 3702695 - G 74 -4.3 -4.83615 | opp_overlap 3702678, overlap 3702678 3702666 GACCTTTGATAAAAA GATCCGTTGTCCA CAGG CAGACAAAGAATC CAAACGCCAGAGAAT TERM 4156 3702768 - 3702744 - G 70 -2.7 -4.84311 | CGCCAGAGAATAAAA CCAGGCCAG GTATTTT CTGGGCAGG CTCAGATAACAGACA HRM2_32640 3703766 - 3703038 - | putative thioesterase HRM2_32650 3704540 - 3704986 + | heat shock protein (HSP20 family protein) HRM2_32660 3705018 - 3705404 + | heat shock protein, 18.5 kDa class I (HSP 18.5, HSP20-like chaperone) TERM 4157 3705421 - 3705435 + T 70 -9.2 -2.87344 | TGATGGTTTCATTAT CCGGGC CTA GTCCGG TATGTCAAAGAGCTC HRM2_32670 3706344 - 3705427 - | putative metal-dependent hydrolase (TIM-barrel fold protein) TERM 4158 3706243 - 3706224 - G 71 -5 -4.56597 | opp_overlap 3706226 TCTTCCGGGGAAAAA GATGGACA TGGC TGTCAATC ACCCGGTCCATGGTT HRM2_32680 3706951 - 3706337 - | hypothetical protein HRM2_32690 3707299 - 3706964 - | hypothetical protein HRM2_32700 3708766 - 3707393 - | sigma-54 dependent DNA-binding response regulator TERM 4159 3707783 - 3707772 - G 70 -2.2 -5.00884 | ATCCGGCGGAAAAAA GCCT CGGC AAGC AAAGGGATATCCCCG TERM 4160 3709025 - 3709015 - g 83 -3.2 -5.43414 | ACCAGATAGAAAAAA CGTC GCA GACA GACTTCTGGACCTTA HRM2_32710 3708989 - 3709282 + | hypothetical protein TERM 4161 3709303 - 3709276 - f 100 -6.4 -5.626 | gap 1, opp_overlap 3709285 CAGTGGAGAAAAAAA TGACTGAAACGAA CCC TTCGTT-CTGTCA TGCGGCACCATTATT TERM 4162 3710784 - 3710774 - g 78 -4 -5.18357 | GAATTTATTAAAAAA TTTG AAG CAAA AGAGACCCGGGTGCT nox1 3709346 - 3711052 + | Nox1 TERM 4163 3711107 - 3711077 - f 100 -11.8 -3.84712 | opp_overlap 3711076 3711073, overlap 3711078 CAATTCCAGATTAAA CGGCGCACCGGA TTTTATT CCCGGTGCGCCC CTGGTTTCTAAACTT TERM 4164 3711106 - 3711078 - f 100 -15.3 -2.90345 | opp_overlap 3711076 3711073, overlap 3711077 AATTCCAGATTAAAC GGCGCACCGGA TTTTATT CCCGGTGCGCC CCTGGTTTCTAAACT TERM 4165 3711159 - 3711134 - f 70 -5.4 -4.41616 | ACTTCTTGAAACAAA CTGCCGAAAC CTGTAC ATTACGGCAG GGAAATTTTCTTGAC TERM 4166 3711418 - 3711464 + G 83 -5.1 -5.06414 | opp_overlap 3711393 3711391 3711424, overlap 3711451 GGTAAGAACGAGCCT TGAACAGGGCA-CCATGCCGGCC GAA GACCTTC-TGGATGCCCTGATCA TTTTTGTTGCAGGCA fsxA 3711233 - 3711628 + | FsxA HRM2_32740 3711646 - 3712173 + | NAD(P)H-dependent dehydrogenase/reductase HRM2_32750 3712163 - 3713050 + | putative signal transduction protein HRM2_32760 3714357 - 3713047 - | predicted tRNA processing ribonuclease Rbn (RNase BN) TERM 4167 3713798 - 3713784 - G 72 -3.5 -4.83169 | overlap 3713771 AGGGTTCCACAAAAA CCACC CCTCC GGTAG CTTCAAAAAAGACCT HRM2_32770 3715358 - 3714354 - | 3-beta hydroxysteroid dehydrogenase/isomerase family protein TERM 4168 3715466 - 3715455 - H 73 -3.6 -5.00616 | CTTTTTTTTAAAAAA GCCC AGAC AGGC TATACCTAAAAAAAA acsL3 3715722 - 3717227 + | AcsL3 HRM2_32800 3717438 - 3717752 + | hypothetical protein cspB2 3718010 - 3717810 - | CspB2 TERM 4169 3718623 - 3718598 - g 78 -2.5 -5.24449 | gap 1 GACAAACTCAAAAAA GGCGTCGACATC CTT GTTG-CAACACC TGGCAGACTCCTTGA HRM2_32820 3718235 - 3719443 + | putative helicase of superfamily II TERM 4170 3719464 - 3719507 + T 82 -5.8 -5.07053 | opp_overlap 3719471, overlap 3719471 CAGATTGCGCACCCT GATTTAAGGCAGCTCAGACC TCCG GGCCTGGGCTGCCTGTCCTC TTTTTTCCGGTGGTT TERM 4171 3719500 - 3719471 - T 100 -15.7 -3.06183 | opp_overlap 3719471 3719464 CGCACCCTGATTTAA GGCAGCTCAGACC TCCG GGCCTGGGCTGCC TGTCCTCTTTTTTCC TERM 4172 3719471 - 3719500 + T 100 -15.7 -3.09112 | opp_overlap 3719471, overlap 3719464 CGCACCCTGATTTAA GGCAGCTCAGACC TCCG GGCCTGGGCTGCC TGTCCTCTTTTTTCC TERM 4173 3719880 - 3719848 - T 78 -9.2 -3.70722 | opp_overlap 3719848, overlap 3719866 GGCACCAATATATAA GAGCCATTGGAACA TAATT TGTTTCAGTGGCTC TTTTTTGTTTGAGAA TERM 4174 3719848 - 3719880 + T 100 -13.6 -5.63517 | opp_overlap 3719848 3719866 GGCACCAATATATAA GAGCCATTGGAACA TAATT TGTTTCAGTGGCTC TTTTTTGTTTGAGAA TERM 4175 3719932 - 3719898 - T 72 -6.4 -4.36914 | opp_overlap 3719930, overlap 3719866 TTTTGTTTGAGAAAA CAGGGCACAGAAACAA GGG CTATTGCCGCACCCTG TTCAACAGCTTAATT HRM2_32840 3720158 - 3719949 - | hypothetical protein TERM 4176 3720400 - 3720431 + r 91 -8.6 -4.58773 | opp_overlap 3720398 3720403, overlap 3720401 AATAGCCAGTTAACG ATATCCAGGGGCCG TCAC CGACCCCTGGACAG TTTTCATTTAATCAA TERM 4177 3720401 - 3720430 + r 89 -12.1 -3.34541 | opp_overlap 3720398 3720403, overlap 3720400 ATAGCCAGTTAACGA TATCCAGGGGCCG TCAC CGACCCCTGGACA GTTTTCATTTAATCA TERM 4178 3720428 - 3720403 - R 100 -16.9 -2.92371 | opp_overlap 3720401 3720400, overlap 3720398 AGCCAGTTAACGATA TCCAGGGGCCG TCAC CGACCCCTGGA CAGTTTTCATTTAAT prxU 3721158 - 3720439 - | PrxU TERM 4179 3720879 - 3720896 + g 74 -8.5 -4.07124 | opp_overlap 3720878 TGAACTCAGAATATT TTTCAGC AACT GCTGAAA TTTCTGTGGCTCATA TERM 4180 3721048 - 3721060 + g 86 -3.3 -5.58209 | GCCAACCTTTATCAT GGATG AGA CCTCC TTTTTTTCAGTTTCA TERM 4181 3721240 - 3721220 - R 77 -6.1 -4.74013 | opp_overlap 3721218 3721220 3721239 TTGAAATAGATAAAA GCCTGATTA AAA CACTCAGGC TATAGTATTTTTATA TERM 4182 3721554 - 3721583 + r 89 -6.4 -5.26875 | gap 1, opp_overlap 3721573 TGTTAAAACCAGTCA GCCGCTGCGCTTT GTAAA ATAGC-CGGCGGC TTTTTTGATTCAACC HRM2_32860 3721855 - 3721541 - | hypothetical protein TERM 4183 3721655 - 3721640 - G 74 -4.7 -4.82901 | GTGTTTGGATAAAAA CTTGC CCATAT GCAAG GCGCAAGCAAAGCTG HRM2_32870 3721884 - 3722249 + | hypothetical protein TERM 4184 3723433 - 3723414 - g 74 -4.2 -4.77165 | TCCTTGAGAATAAAA GCCTGGTT GTTC AACCCGAC TGGACAGGAAAACTC HRM2_32880 3722255 - 3723718 + | hypothetical protein TERM 4185 3723730 - 3723713 - T 81 -11.3 -2.89564 | opp_overlap 3723717 CCTTCACCCGATACA CCCTGAC CCAG GTCAGGG ACTGGTCCGGGGTCT TERM 4186 3723717 - 3723744 + T 100 -8.4 -4.77036 | gap 1, opp_overlap 3723713 CACCCGATACACCCT GACCCAGG-TCAG GGA CTGGTCCGGGGTC TTTTTCATACTGGGA HRM2_32890 3724936 - 3723779 - | putative permease of the major facilitator superfamily TERM 4187 3725239 - 3725257 + G 73 -8.8 -3.75169 | opp_overlap 3725239 3725240, overlap 3725230 3725240 TGGAGCCGTGGCAAA GGCCTCGT TTT ACGAGGCG TTTAATCCCGTCATC TERM 4188 3725257 - 3725239 - g 70 -8.8 -3.53811 | opp_overlap 3725230 3725239 3725240, overlap 3725240 TGGAGCCGTGGCAAA GGCCTCGT TTT ACGAGGCG TTTAATCCCGTCATC TERM 4189 3725256 - 3725240 - g 74 -12.3 -2.72144 | opp_overlap 3725230 3725239 3725240, overlap 3725239 GGAGCCGTGGCAAAG GCCTCGT TTT ACGAGGC GTTTAATCCCGTCAT TERM 4190 3725240 - 3725256 + G 74 -12.3 -2.8478 | opp_overlap 3725240 3725239, overlap 3725230 3725239 GGAGCCGTGGCAAAG GCCTCGT TTT ACGAGGC GTTTAATCCCGTCAT TERM 4191 3725834 - 3725852 + G 73 -3 -4.93898 | TTCTTTGAAATTCCC CAGAACGA ATT TCGCCCTG TTTTTATCCTGCTCT HRM2_32900 3725081 - 3726004 + | putative transporter of auxin efflux carrier family HRM2_32910 3726030 - 3727106 + | putative sodium:dicarboxylate symporter permease TERM 4192 3727156 - 3727131 - T 80 -4.6 -5.24449 | opp_overlap 3727131 TATAAACGCAAAAAA GCCCCAATGA AATCAA TCAAAGGGGC TTTCCTTACATATAT HRM2_32920 3727489 - 3727229 - | putative cold-shock protein HRM2_32950 3727862 - 3728734 + | putative permease of the drug/metabolite transporter (DMT) superfamily HRM2_32960 3728932 - 3729108 + | hypothetical protein TERM 4193 3729120 - 3729110 - f 74 -6.8 -4.34557 | AACCCAAAAAGTAAA CAGG AGC CCTG ACCTTGAACCAGATC selB 3729124 - 3731043 + | SelB TERM 4194 3731597 - 3731611 + G 70 -4.2 -4.59773 | overlap 3731587 3731592 3731599 CTGGGTCAGTTTCCT GATCCT GTG AGGAAC TTTTTAAACATCCCG HRM2_32980 3731081 - 3731743 + | putative nitroreductase hemN2 3733024 - 3731876 - | HemN2 HRM2_33000 3734168 - 3733017 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 4195 3734897 - 3734879 - g 72 -3.8 -4.83615 | overlap 3734882 CACCCCCCAGAAAAA GATCATCC AGC AGATGGTC CAACGATTCAATGTT HRM2_33010 3734247 - 3735350 + | putative aminodeoxychorismate lyase HRM2_33020 3736104 - 3735511 - | hypothetical protein ftsK2 3738496 - 3736235 - | FtsK2 TERM 4196 3736404 - 3736420 + g 70 -3 -4.78107 | gap 1, opp_overlap 3736404 3736403, overlap 3736380 3736405 GTGGTAAAAACATAC T-CCAGG GCAG CCTGGTA TTTTTCATCATAATC TERM 4197 3736405 - 3736418 + g 74 -8.1 -4.00443 | opp_overlap 3736404 3736403, overlap 3736380 3736404 TGGTAAAAACATACT CCAGG GCAG CCTGG TATTTTTCATCATAA TERM 4198 3738133 - 3738147 + g 100 -4.2 -6.09196 | opp_overlap 3738121 3738133 3738135, overlap 3738135 AATCCTCTGAAATAA CATCCC TGA GGGATA TTTTTTTCTTTTCCA TERM 4199 3738135 - 3738145 + g 79 -6.8 -4.67109 | opp_overlap 3738121 3738135 3738133, overlap 3738133 TCCTCTGAAATAACA TCCC TGA GGGA TATTTTTTTCTTTTC TERM 4200 3738200 - 3738220 + g 70 -9.1 -3.50555 | CGACTTGCGCTGGTC CAGATAAAG CGC CTTTGTCTG TTCATGTTCTTTCAC TERM 4201 3738759 - 3738783 + H 70 -2.8 -5.00884 | ACTTTTATCTGACAG GGGACATTTT ACCCG ACAACGTCCC TTTTTTCAAGCAGAT TERM 4202 3738937 - 3738925 - g 76 -4.8 -4.98061 | ACAGATCAAACAAAA CAGG TTGCG CCTG CTCACCGAAAATAAC TERM 4203 3739766 - 3739747 - g 83 -2.8 -5.41143 | overlap 3739748 CAGCCTTGAAAAAAA GGATGACG GCTA CATCATCG GTATCCACATCATTG TERM 4204 3739770 - 3739788 + G 91 -7.4 -5.14563 | overlap 3739771 GCTACATCATCGGTA TCCACATC ATT GATGTGGC TTTTTTCATCAAGGA TERM 4205 3739771 - 3739787 + G 80 -10.9 -3.68256 | overlap 3739770 CTACATCATCGGTAT CCACATC ATT GATGTGG CTTTTTTCATCAAGG TERM 4206 3740618 - 3740592 - g 76 -6.4 -4.66953 | overlap 3740583 3740593 CCAACACGGGAAAAA TCCAGTTCCAGC GAC GCAGGTACTGGC TGCTCAGATATCTTG TERM 4207 3740617 - 3740593 - g 72 -9.9 -3.39449 | overlap 3740583 3740592 CAACACGGGAAAAAT CCAGTTCCAGC GAC GCAGGTACTGG CTGCTCAGATATCTT HRM2_33040 3738836 - 3740827 + | putative ribonuclease II (RNB family protein) TERM 4208 3740839 - 3740863 + T 70 -5.6 -4.24384 | overlap 3740840 TTAAATTCGGTCATT AGGGGACGTT TCTTC AACGCCCCCC TTTGGTTTTAATGCT purH1 3742121 - 3740871 - | PurH1 purH2 3742808 - 3742125 - | PurH2 HRM2_33070 3743184 - 3743489 + | hypothetical protein HRM2_33080 3743683 - 3743486 - | hypothetical protein HRM2_33090 3743785 - 3744648 + | hypothetical protein TERM 4209 3745225 - 3745212 - g 72 -8.1 -3.89215 | opp_overlap 3745211 3745217 TTTCATAAATTTAAA GGCCA GTGG TGGCC CCTTTTGCGCATGGA HRM2_33100 3744774 - 3745253 + | putative acetyltransferase HRM2_33110 3745973 - 3745275 - | transcriptional regulator (GntR family protein) dksA4 3746358 - 3746624 + | DksA4 TERM 4210 3746725 - 3746737 + T 89 -10.5 -4.03413 | ATGCCATCCCTCGTT CCGGC CGT GCCGG TTTATATGAAACACT TERM 4211 3746814 - 3746826 + T 80 -10.5 -3.55447 | GAGCCATATCGCGCT CCGGC CGT GCCGG TTATATGGTCAGTCG HRM2_33130 3747709 - 3746876 - | putative periplasmic solute-binding protein HRM2_33140 3748907 - 3747702 - | putative metallo-dependent hydrolase fbiC1 3750034 - 3748904 - | FbiC1 TERM 4212 3749992 - 3750002 + g 78 -4 -5.06505 | GATACGTGTCCATGC TATG GTC CATA TTTTTGTCTCTACTT fbiC2 3750288 - 3750031 - | FbiC2 TERM 4213 3750792 - 3750777 - R 73 -8.2 -3.71279 | opp_overlap 3750791 AATAGTCAAAATCAA GGGCCG GATT CAGCCC GCCCACAATGTGCAG HRM2_33170 3752646 - 3751138 - | multiple domain fusion protein (Zn-finger domain associated with topoisomerase type I/adhesin of Type V secretory pathway) HRM2_33180 3753047 - 3752643 - | hypothetical protein HRM2_33190 3753942 - 3753061 - | chromosome partitioning ParA family protein TERM 4214 3753304 - 3753283 - G 70 -2.3 -5.02476 | gap 1, overlap 3753285 ACATTGGGTAAAAAA GACACCTG CGATCTT CAGGTG-C TGCTGAAAATTATCC TERM 4215 3753486 - 3753506 + g 80 -9.7 -4.0825 | overlap 3753487 ATTCATCCCTTAACT CCCTGAGGA ATA TCCTCAGGA TTCTTTCATTGCCGA TERM 4216 3753487 - 3753505 + g 81 -13.2 -3.04468 | overlap 3753486 TTCATCCCTTAACTC CCTGAGGA ATA TCCTCAGG ATTCTTTCATTGCCG TERM 4217 3755668 - 3755656 - g 74 -7.7 -4.27441 | ACCAGGACGAAGAAA TCCAG CAG CTGGA TGAACAGGAAATTGA HRM2_33200 3753984 - 3756524 + | hypothetical protein TERM 4218 3757071 - 3757057 - g 72 -10 -3.42346 | overlap 3757060 AAGAGCTCATGAGAA TCAGGG CAG CCCTGA CCCTGGCTGAAAAGG TERM 4219 3757175 - 3757185 + G 70 -4.6 -4.67048 | CATGCGGGAAATGGG GGCT GAC GGCC TTTCTTTTCCCGTGA pepQ 3756597 - 3757712 + | PepQ HRM2_33220 3757713 - 3758600 + | tyrosine recombinase XerD HRM2_33230 3758679 - 3760322 + | putative dioxygenase TERM 4220 3760377 - 3760365 - Tf 95 -7.7 -5.09685 | TGTAAAAAAAAATAA CCCTA TAG TAGGG TGTGACTAATTTTAT TERM 4221 3761832 - 3761816 - gT 74 -7.9 -3.93638 | overlap 3761803 AATGAACCTGATAAA TCCCGGG TTT CCTGGGA CGGAACGGTTCAGAT TERM 4222 3763364 - 3763338 - gT 100 -18 -3.97308 | CCCAAACAGATGAAA CCCCAGGGACCG CTT CGGCCCCTGGAG AAACGCCCAGAGGAG TERM 4223 3763895 - 3763864 - gT 76 -10.8 -2.66106 | gap 1, opp_overlap 3763886, overlap 3763860 CACGGGAACAAGCCA GGC-CACCGAGGCCA TCA TGGCAACGGTGAGCC GCCTTACCGGATTTC TERM 4224 3765831 - 3765813 - gT 70 -4.4 -4.68384 | opp_overlap 3765823, overlap 3765814 AGGTACTCAACAAAA CGGCCCAG GAC CTGGCACG GCGCTTTCAGACGTG TERM 4225 3765946 - 3765923 - gT 74 -4.6 -4.7657 | gap 1, overlap 3765925 CAAAAATTTCAAAAA CA-GGGCATGA ATC TCATCCCCCTG AAAGCCGGGGCAGCA TERM 4226 3765943 - 3765925 - gT 72 -7.4 -3.97443 | overlap 3765923 AAAATTTCAAAAACA GGGCATGA ATC TCATCCCC CTGAAAGCCGGGGCA TERM 4227 3766704 - 3766717 + GT 70 -8.1 -3.60792 | GTTTTGCAAGTCTCA GGGTC TATG GACCC TTTGCCGATTCAACA TERM 4228 3766918 - 3766901 - gT 80 -3.3 -5.2889 | gap 1 GAAAAAAAAAAACAA CCGGTGCG CTT CTC-CCGG GAGCAGATACTTGCC TERM 4229 3767735 - 3767753 + GT 93 -12.4 -3.21225 | overlap 3767728 TACCAGGACCCGGTC TGCCCGGG TTC CCTGGGCA TTGAATCCTTTTTAC pks 3768419 - 3768000 - | Pks HRM2_33240 3760421 - 3768079 + | putative amino-acid acetyltransferase TERM 4230 3769205 - 3769217 + G 78 -6.3 -4.77165 | GCCATTTATGGCAAG GAAGA TTT TCTTC TTTTATTATGGAGGA HRM2_33260 3768904 - 3769563 + | transposase family protein argA2 3771191 - 3769824 - | ArgA2 HRM2_33280 3772479 - 3771202 - | TRAP-type C4-dicarboxylate transport system, large permease component TERM 4231 3772402 - 3772387 - G 76 -3.2 -5.07652 | overlap 3772389 GCCGGTAAAATAAAA TCCTGC ACAG GCAGCA GCCAGGATCACCGCA HRM2_33290 3772964 - 3772476 - | TRAP-type C4-dicarboxylate transport system, small permease component HRM2_33300 3773967 - 3772969 - | TRAP-type C4-dicarboxylate transport system, periplasmic component HRM2_33310 3774873 - 3774010 - | hypothetical protein HRM2_33320 3775076 - 3775606 + | hypothetical protein TERM 4232 3776219 - 3776207 - g 76 -6.3 -4.64766 | opp_overlap 3776207 GCTACATTTCAAAAA CCATT ACC AATGG TTATATCGAACTTCC TERM 4233 3777125 - 3777106 - g 80 -2.8 -5.27399 | overlap 3777107 GAAGACATGAAAAAA CTCAAGCA ATTC TGCTCGAC AATCCTTAAAATAAG HRM2_33330 3775609 - 3777306 + | putative Fe-S oxidoreductase family protein HRM2_33340 3777303 - 3778373 + | hypothetical protein HRM2_33350 3779826 - 3778492 - | putative mechanosensitive small-conductance channel MscC HRM2_33360 3780298 - 3779711 - | putative mechanosensitive small-conductance channel MscC HRM2_33370 3782400 - 3780619 - | ABC-type multidrug transport system, ATP-binding protein TERM 4234 3780793 - 3780812 + g 91 -5.6 -5.45652 | ACGGTTCTCCTTGAG TCGGGCCG TTGC CAGCCTGA TTTTTTCTTCAGAAT TERM 4235 3781832 - 3781809 - G 87 -7.4 -5.00884 | ATCTGCCGGAAAAAA CCATGGTGGT CCAG ACCACAACGG GCAGAATAACCATGA TERM 4236 3782359 - 3782378 + g 73 -10.6 -3.224 | overlap 3782358 3782361 CCTTATCAGGCGCAG GTCCCGGC CTTT GCCGGGTC TCTTATCAACCCTTG TERM 4237 3782361 - 3782376 + g 77 -11.8 -3.17325 | overlap 3782359 3782358 TTATCAGGCGCAGGT CCCGGC CTTT GCCGGG TCTCTTATCAACCCT HRM2_33380 3784142 - 3782397 - | ABC-type multidrug transport system, permease component TERM 4238 3783421 - 3783410 - G 70 -4.4 -4.63527 | overlap 3783414 TGACCATGGGAAAAA TCAG TCCC CTGA GGCGAACAAGGTGCA HRM2_33390 3785442 - 3784336 - | two-component transcriptional regulatory protein TERM 4239 3784734 - 3784752 + g 70 -8.8 -3.53811 | TGATCACCCACTCCT CCGGGG TGAGCTT CCCCGG TTTGAGCAGAATCCG TERM 4240 3785420 - 3785406 - G 70 -10 -3.21099 | GGGGCTCATCATCAA CCACCA GTA TGGTGG GAGAACCTGGGATAT HRM2_33400 3788450 - 3785439 - | sensory box histidine kinase (GGDEF domain protein) TERM 4241 3785950 - 3785974 + g 73 -9.3 -3.71991 | overlap 3785948 ATTTTACTGAATTCT TTTGGCAGATC CCG GATCAGCCGAA TCTGTTTTTCTTTGA TERM 4242 3787596 - 3787583 - G 85 -3.7 -5.37593 | TGGTAAAGGAAAAAA GGCCC TTCT GGGTC ATCACCTGCCCGCTT HRM2_33410 3788814 - 3788440 - | putative transcriptional response regulator protein HRM2_33420 3791179 - 3788861 - | multidomain fusion protein (N:DNA-binding domain/C:signal transduction histidine kinase) trpA 3792036 - 3791275 - | TrpA trpB 3793255 - 3792029 - | TrpB TERM 4243 3793142 - 3793154 + g 93 -9.1 -4.96501 | opp_overlap 3793142, overlap 3793130 GTACTCGTTCCAGAA GGCTG GAT CAGCC TTTATTTTTCTGAAC HRM2_33450 3793979 - 3793248 - | transcriptional regulator (GntR family protein) TERM 4244 3794324 - 3794305 - H 100 -10 -4.91873 | CACATGAATGAAAAA TGCCTGCC AGGT GGCAGACA AAGACAAAAAAAACG TERM 4245 3795530 - 3795518 - g 83 -3.4 -5.52384 | overlap 3795521 TGCCCAGGAAAAAAA GATC GACAT GATC GTACTGGGCATCCGG usp1 3794661 - 3795668 + | Usp1 TERM 4246 3795711 - 3795668 - T 75 -8.3 -3.90762 | opp_overlap 3795672 3795673, overlap 3795666 GACCTCGGAAAAATA GCAGACCGGTTCCCGG-AT TCTTTCCT ATACCGGGAACCTG-CTGC CCAAAAAAATTCAAT HRM2_33470 3796382 - 3795726 - | predicted assimilatory-type nitrite/sulfite reductase TERM 4247 3796349 - 3796362 + g 90 -9.5 -4.52703 | TTTCCTTGTCTCTCT GGGGG ATGG CCCCC TTTTCTCCTACTTTC dsbC 3797352 - 3796549 - | DsbC TERM 4248 3796985 - 3796967 - G 100 -7.3 -5.43414 | opp_overlap 3796968, overlap 3796968 ACCACATAGAAAAAA TCCCGGG CCTGC CCCGGGT TATAGGACAGCGCCA TERM 4249 3796984 - 3796968 - G 82 -10.8 -3.84422 | opp_overlap 3796968, overlap 3796967 CCACATAGAAAAAAT CCCGGG CCTGC CCCGGG TTATAGGACAGCGCC TERM 4250 3796968 - 3796984 + g 73 -10.8 -3.28712 | opp_overlap 3796967 3796968 CCACATAGAAAAAAT CCCGGG CCTGC CCCGGG TTATAGGACAGCGCC TERM 4251 3797490 - 3797516 + H 74 -4.4 -4.99861 | overlap 3797513 TTTAATATTTTCCTG CCTTGGTTCAAG CGT TTTAAACCCAGG TTTTTCTGATTCATA TERM 4252 3797589 - 3797575 - H 70 -5.8 -4.28049 | opp_overlap 3797578 TTTAAAATTTTAAAA TTTCAA TTT TTGAAA AGATTGCCTTTTTTA sulP2 3797720 - 3799492 + | SulP2 TERM 4253 3799926 - 3799959 + G 79 -11.6 -3.53012 | opp_overlap 3799926 3799924 3799945 ATCGGGAAATACACA TGGCCCGGCGGGGC AACAAG GTCCCCCAGGGCCA TTTCCAGAACGGGGG TERM 4254 3800462 - 3800450 - g 70 -9.1 -3.59262 | opp_overlap 3800442 GCCGAGATCCGCAAA CGGGT ATT ACCCG GATGTGCCGTCTGCC HRM2_33500 3799664 - 3800773 + | putative coenzyme F420 hydrogenase, beta subunit (8-hydroxy-5-deazaflavin-reducing hydrogenase, beta subunit) (FRH) TERM 4255 3800814 - 3800859 + F 71 -6.9 -4.1466 | overlap 3800796 GCGGCGTTGCTGCAA GATTCTGCAATCCTCACGTAC TATA GTACGTTCCGGTTTCAGAATC TTTTGCGCCTTGCAT TERM 4256 3801883 - 3801862 - g 71 -10.9 -3.08798 | gap 1, opp_overlap 3801865 ACCCTTTATTGAAGA GGCGGTCAAG GTG CTTG-CCGCC GGGTCCGACCTTGAT TERM 4257 3802052 - 3802030 - g 73 -3.4 -4.91109 | opp_overlap 3802048 3802049 CTCCCATGACAAAAA TTCCCGAC TGGCCAT GCCGGAAA TCTCCATACCGCCCA TERM 4258 3802192 - 3802204 + G 79 -6.9 -4.59773 | CTACTCCATGGGCAT GCTGC CGG GCGGC TTTTTCACCCTCAAA iorA3 3800933 - 3802858 + | IorA3 iorB3 3802855 - 3803490 + | IorB3 TERM 4259 3803944 - 3803970 + G 74 -8.1 -4.10657 | gap 2 CTGGTGGAAACCTTT GGTCTTGGGCCCA TCA TGGGCC-A-GACC TTTTCCCAGCTCTCC TERM 4260 3804172 - 3804184 + G 86 -6.3 -5.0916 | ATTGAGGTGGCACGC TTCTG CGA CAGAA TTTTTCTGTTCCGGG HRM2_33530 3803623 - 3804315 + | ABC-type nitrate/sulfonate/bicarbonate transport system, ATP binding component (ATPase) HRM2_33540 3804305 - 3805078 + | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component TERM 4261 3805186 - 3805219 + G 87 -4.4 -5.40072 | opp_overlap 3805186, overlap 3805187 3805190 GGTTGTTTAACACCA GCGTGGTCGGGGAC CTTTAT GCCCTGGACCACGG TTTTTTTAAACGGGC HRM2_33550 3805065 - 3806057 + | sensory box histidine kinase (GGDEF domain family protein) HRM2_33560 3807228 - 3806014 - | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic substrate binding component TERM 4262 3807665 - 3807651 - H 78 -7.2 -4.55295 | opp_overlap 3807660 TTCTTGACAAACAAA CAATAC CGA GTATTG TCATACTTTACAGCA TERM 4263 3808367 - 3808346 - g 74 -4.3 -4.84311 | gap 1 TCTTATACAAGAAAA CCGG-TGGAC AAA GCCCTTCCGG TGCAACACAAAAAAC TERM 4264 3808814 - 3808830 + G 80 -2.9 -5.24531 | CTGACCGCTGTTATC CTGCC GGTAGTG GGCGG TTTTTTATGGACCAT HRM2_33570 3807788 - 3808945 + | putative permease of the major facilitator superfamily TERM 4265 3809100 - 3809086 - g 70 -4.2 -4.72272 | overlap 3809095 CGCCTTCAGCAAAAA CGGAAA ATT CCTCCG TGTGGCCGGCATGGA HRM2_33580 3808961 - 3809419 + | putative dimethyl sulfoxide reductase TERM 4266 3809546 - 3809579 + F 80 -10.4 -3.47573 | GCCTTGTGATCCTCC TCCCCCCCTTTT TGGGGGGGAT AAGAGGGGGGGA TTGTGGTATAAATAA TERM 4267 3810027 - 3810015 - g 80 -2.7 -5.24129 | TTGTTCGAGAAAAAA CAATT ACG AACTG GGGAACGAATCCGCT HRM2_33590 3809639 - 3810109 + | transposase family protein TERM 4268 3810767 - 3810787 + G 87 -4.7 -5.42259 | overlap 3810761 CATAGATGATGCCAC CCGGTAT ATCGTTC ATGCCGG TTTTTTTACCGCTGA TERM 4269 3811240 - 3811257 + G 84 -11.3 -3.9398 | opp_overlap 3811237 3811235 3811240 ACCTGAACAATACCA TCCGCCT TAAA AGGCGGA TTTATGAGGTTATCG TERM 4270 3811257 - 3811240 - g 71 -11.3 -2.85813 | opp_overlap 3811240, overlap 3811237 3811235 ACCTGAACAATACCA TCCGCCT TAAA AGGCGGA TTTATGAGGTTATCG HRM2_33600 3810195 - 3811403 + | transposase /integrase family protein TERM 4271 3811439 - 3811452 + G 87 -4.5 -5.47218 | GACGTCACAACACCT TTGCC CATG GGCGA TTTTTTTGGATGGAA exeA3 3811406 - 3812248 + | ExeA3 TERM 4272 3812323 - 3812345 + F 100 -14.9 -3.95022 | opp_overlap 3812323 GTCTACATGATAAAA GCCGGAAGG AAACC CCTTCCGGC TTTCCTATTGATGAA TERM 4273 3812345 - 3812323 - f 100 -15.6 -4.50976 | opp_overlap 3812323 GTCTACATGATAAAA GCCGGAAGGA AAC CCCTTCCGGC TTTCCTATTGATGAA HRM2_33620 3812480 - 3814207 + | putative anaerobic dimethyl sulfoxide reductase, chain A (DMSO reductase) precursor TERM 4274 3814607 - 3814563 - g 74 -7.8 -4.1899 | gap 2, overlap 3814564 TCAGGTGATGCAAAA GTGCGATCTCTGTGCCGGCCAG ACC CTGGCAGGCACGGAT-CCGC-C ATGCGTGGCCACCTG HRM2_33630 3814189 - 3814716 + | putative anaerobic dimethyl sulfoxide reductase, chain B (DMSO reductase, iron-sulfur subunit) HRM2_33640 3815695 - 3814829 - | putative SAM-dependent methyltransferase TERM 4275 3815270 - 3815257 - G 72 -3.8 -4.88407 | TCATGGAAGCAAAAA CCAG ATCAAA CTGG CCGGACAGTCCCTCT TERM 4276 3815340 - 3815358 + g 83 -3 -5.40004 | opp_overlap 3815344 CGGAGTTGATCGGAA TGAATGCC CTT GGCAGCCA TTTTTTCCTTTAGTA TERM 4277 3815552 - 3815539 - G 74 -8.1 -4.07568 | GCTCTTTTCGTAAAA CAGCC TCCG GGCTG ACGGTTCTTTTGTCA HRM2_33650 3816096 - 3815716 - | hypothetical protein TERM 4278 3816194 - 3816173 - R 71 -9.4 -3.06831 | TTAATGTGGACCCAA CCCTGGCC GTGGGA GACCAGGG ACAGTCTGCAACCGT HRM2_33660 3816802 - 3816209 - | transcriptional regulator (TetR family protein) TERM 4279 3816359 - 3816340 - G 70 -2.9 -4.8543 | gap 1, opp_overlap 3816340 GAATGTCGAGAAAAA CGCC-AAT CTCGT ATTCGGCG TCTTCTATGTTAAAT TERM 4280 3816536 - 3816548 + g 79 -7.7 -4.4727 | opp_overlap 3816536 GAATCCAGTTGCAAA GGCTT CCA AAGCC TTTTCTGGATCTTCC TERM 4281 3816875 - 3816860 - R 82 -3.3 -5.48303 | opp_overlap 3816860 ATAATTTCAAAAAAA CATAC TACTTG GTATG ATTTATGTCAAGAAA TERM 4282 3817002 - 3817014 + r 91 -10.5 -4.10453 | ATGCCATCCCTCGCC CCGGC CGT GCCGG TTTTAAGAAGATTTC HRM2_33670 3818426 - 3817017 - | hypothetical protein TERM 4283 3818421 - 3818449 + g 73 -3.1 -5.00616 | CAACGGTTGGGGCGT CGTCATGCGCAAA GCC TTTGTTCAAGATG TTTTTTACCAAGGCG HRM2_33680 3820153 - 3818423 - | hypothetical protein TERM 4284 3818898 - 3818882 - G 74 -4.3 -4.87665 | overlap 3818884 CTTGACCCACAAAAA CTGCCCC AGG GTGACAG GGCTGGTTCGGATGA TERM 4285 3819049 - 3819031 - G 77 -10.2 -3.5241 | overlap 3819029 CATTGCCCAGAAACA CGGTCCCC ATG GGTGACCG TTCAAGGGGCAGCAC TERM 4286 3819200 - 3819175 - G 70 -9.6 -3.19921 | ACACAAGGGCAGCAA CGGGCAGGGA AAGAAA CCCCAGCCCG AAAAATTTGAGCCGC HRM2_33690 3820913 - 3820140 - | ATPase (AAA+ superfamily protein) HRM2_33700 3822634 - 3820910 - | putative transglutaminase protein TERM 4287 3821123 - 3821110 - G 80 -2.3 -5.40072 | TGTTGTTCAAAAAAA CCAGG CCCG CCTCG ATGCGTGTTGGAATG TERM 4288 3821198 - 3821170 - G 78 -5.9 -4.86731 | GGGCGGCAAACAAAA CCGCATGCTCG TTGCAGT CGCCCATGCGG GCATTCAGGGTTGAA TERM 4289 3822208 - 3822242 + g 81 -13.6 -3.1637 | overlap 3822197 CACCGTCCATGCGAA GGTCAACATCCTGGAC CAT GCCCATGGTGTTGACC TTCATGGCGGTCTGT HRM2_33710 3822924 - 3822658 - | site-specific recombinase XerD HRM2_33720 3823246 - 3823611 + | hypothetical protein TERM 4290 3823642 - 3823618 - T 75 -7.1 -4.36206 | overlap 3823620 ATAATTTAGAATAAA GGCGTATAACC CTC GGTTAGACGGC CTCCCTCCGTCATCC HRM2_33730 3824210 - 3823983 - | hypothetical protein TERM 4291 3824086 - 3824098 + g 74 -4.1 -5.00616 | GGTGCTGCGGGCCCC CTCTT CCC AAGGG TTTTTTCAAGACAAA TERM 4292 3824240 - 3824250 + r 74 -6.8 -4.28188 | AAGGCGTCCCTATGG GGGA TAG TCCC TTTATCTTATGAATC HRM2_33740 3824980 - 3824252 - | hypothetical protein TERM 4293 3824726 - 3824711 - G 70 -8.2 -3.75461 | TAAATCGGCATGAAA CGGGCC AAAA AGCCCG CAGTCTGTAGCAATG aor6 3826791 - 3824977 - | Aor6 TERM 4294 3826069 - 3826059 - G 71 -6.8 -4.25283 | opp_overlap 3826058 ATGCCTTCATCAAAA GGGT TGA ACCC AGTTCATGGCGTTCC HRM2_33760 3827312 - 3826791 - | iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) HRM2_33770 3827590 - 3827312 - | hypothetical protein HRM2_33780 3828355 - 3827600 - | ABC-type branched-chain amino acid transport system, ATPase component HRM2_33790 3830177 - 3828303 - | ABC-type branched-chain amino acid transport system, permease component TERM 4295 3828995 - 3829014 + gr 72 -3.6 -4.8543 | gap 1, overlap 3828999 CGGCCCCGTTCGGGC CGATGATGC TGA GTATC-TCG TTTTTATACAGGTTA TERM 4296 3829050 - 3829037 - GR 70 -8.1 -3.68767 | opp_overlap 3829036 3829037 3829046, overlap 3829033 3829046 ACAGGTTAAAATCAA GGCCA TCAA TGGCC CTTAATCCTCCAAAA TERM 4297 3829874 - 3829858 - GR 74 -2.1 -5.14965 | opp_overlap 3829859, overlap 3829859 AGTCCCAGTAAAAAA CCCGCTA CCA TGGCGGT TATGGCGCAGACAGG HRM2_33800 3831096 - 3830164 - | ABC-type branched-chain amino acid transport system, permease component TERM 4298 3830291 - 3830273 - G 83 -3 -5.50499 | GCAGACGGAAAAAAA GTGACGGC CAT GGCTTCAC AAAGCCCCAGGAAAA TERM 4299 3831106 - 3831144 + r 100 -14.9 -3.60475 | opp_overlap 3831113 TTCCATTTGTATTTA TTCAAAACAGGTACTTT AACCC AAAGTACCTGTTGTGAA TTTGACCCCTTTATT TERM 4300 3831137 - 3831113 - R 100 -12.3 -4.19817 | opp_overlap 3831106 TGTATTTATTCAAAA CAGGTACTTTA ACC CAAAGTACCTG TTGTGAATTTGACCC HRM2_33810 3832330 - 3831173 - | ABC-typ branched-chain amino acid transport system, periplasmic substrate binding component HRM2_33820 3833073 - 3832399 - | transcriptional regulator (GntR family protein) TERM 4301 3833664 - 3833637 - H 88 -7 -5.19212 | gap 1, opp_overlap 3833639, overlap 3833639 ATTATCAGTAAAAAA GATGCCTGCTCCC GGG AGGAGC-GGCATT TAATCTTTCTCATTT TERM 4302 3833662 - 3833639 - H 85 -9.6 -4.22314 | gap 1, opp_overlap 3833639, overlap 3833637 TATCAGTAAAAAAGA TGCCTGCTCCC GGG AGGAGC-GGCA TTTAATCTTTCTCAT TERM 4303 3833639 - 3833662 + H 80 -8.9 -4.05181 | gap 1, opp_overlap 3833637 3833639 TATCAGTAAAAAAGA TGCCTGCTCC CGGGA GGAGC-GGCA TTTAATCTTTCTCAT TERM 4304 3833742 - 3833754 + H 80 -2.7 -5.49809 | overlap 3833743 GTATTATATATTGGA TTTGA TTG TCAAG TTTTTTTAAACTTTG HRM2_33830 3834135 - 3834356 + | hypothetical protein TERM 4305 3834814 - 3834824 + G 73 -3.2 -5.00616 | CAGTTTTTATCAGAC TTGC AGC GCGA TTTTTTAACACAACC HRM2_33840 3834343 - 3834942 + | hypothetical protein HRM2_33850 3834939 - 3835934 + | hypothetical protein TERM 4306 3836008 - 3835970 - f 82 -8.2 -4.39407 | opp_overlap 3835975, overlap 3835972 CTAAAGAATCGAAAA CAGAAGGGGAAATGGCTT AGA ATACTATTTCCCCTTCTT CACAGAACAATGTAA TERM 4307 3836006 - 3835972 - f 88 -10.8 -3.78677 | opp_overlap 3835975, overlap 3835970 AAAGAATCGAAAACA GAAGGGGAAATGGCTT AGA ATACTATTTCCCCTTC TTCACAGAACAATGT HRM2_33860 3836130 - 3836975 + | hypothetical protein greA2 3837441 - 3837728 + | GreA2 TERM 4308 3838175 - 3838163 - g 70 -2.7 -4.82998 | overlap 3838169 TTAAATCAAAAGAAA TTGAA ATA TCCAA CGAGTGGATATCAGA HRM2_33880 3837919 - 3838539 + | hypothetical protein HRM2_33890 3838721 - 3839374 + | putative cold-shock protein HRM2_33900 3839810 - 3841027 + | putative permease of the major facilitator superfamily TERM 4309 3841111 - 3841090 - f 79 -10.8 -2.92656 | opp_overlap 3841089, overlap 3841078 3841092 AAAGGCATCCAGACA GACGCGGG TTACCG CCCGCGCC ATTGATGCCCGCCGT TERM 4310 3841109 - 3841092 - f 73 -9.8 -3.01119 | opp_overlap 3841089, overlap 3841090 3841078 AGGCATCCAGACAGA CGCGGG TTACCG CCCGCG CCATTGATGCCCGCC HRM2_33910 3841147 - 3841635 + | hypothetical protein HRM2_33920 3841643 - 3842530 + | hypothetical protein TERM 4311 3843250 - 3843207 - g 76 -3 -5.09895 | gap 1, overlap 3843208 GACGTATGCAAAAAA GCAGTGGACCGGGATGGAAGA TTT TCCTCC-TCCCATACCCCTGG AAGAGATTCGATTTG HRM2_33930 3842593 - 3843531 + | putative reprotein translocase SecA TERM 4312 3843820 - 3843799 - f 75 -3.1 -5.0925 | gap 1, overlap 3843802 3843804 TGCCAAAATGAAAAA CAATACATTG AGG CAATGCAT-G AAAGAATTACCAGAA TERM 4313 3843818 - 3843802 - f 75 -5.9 -4.62313 | overlap 3843799 3843804 CAAAATGAAAAACAA TACATTG AGG CAATGCA TGAAAGAATTACCAG HRM2_33940 3843818 - 3845494 + | transposase family protein HRM2_33950 3846479 - 3845796 - | putative hemolysin-III related protein TERM 4314 3846584 - 3846621 + r 71 -9.7 -2.57564 | overlap 3846610 AGGTGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCGTGCCG GTTATAAAACAATGA TERM 4315 3846610 - 3846622 + r 78 -10.5 -3.29511 | overlap 3846584 GAGCCATACCTCGCT CCGGC CGT GCCGG TTATAAAACAATGAA HRM2_33960 3847052 - 3846690 - | hypothetical protein HRM2_33970 3847508 - 3847170 - | hypothetical protein TERM 4316 3847322 - 3847306 - GH 74 -3.7 -4.99645 | AGGTCATAAACAAAA TTTTTCC ACC GGATAAA GGATAAGATCCCGCC HRM2_33980 3847454 - 3847750 + | putative CO dehydrogenase flavoprotein TERM 4317 3847961 - 3847979 + GTr 86 -5.8 -5.1861 | overlap 3847962 3847963 TCAGCCCCTTTTTCC AGCCGGGC AAT GCCCGGAG TTTTTTGATCCTGGG TERM 4318 3847962 - 3847978 + GTr 78 -9.3 -3.70443 | overlap 3847961 3847963 CAGCCCCTTTTTCCA GCCGGGC AAT GCCCGGA GTTTTTTGATCCTGG TERM 4319 3847963 - 3847977 + GTr 91 -12.8 -2.81543 | overlap 3847962 3847961 AGCCCCTTTTTCCAG CCGGGC AAT GCCCGG AGTTTTTTGATCCTG TERM 4320 3848223 - 3848251 + GTr 81 -11.5 -2.85508 | overlap 3848220 3848245 CCTGCTGCCTGTCCT CACCGGGCTCGCC AAG GGCTTGCCCGGGG TGCTTCTGGGATTTG TERM 4321 3848495 - 3848477 - gTR 86 -8.8 -4.28548 | overlap 3848478 ACGGATTCAGCAAAA CCATGGGC ATT GCCCATGC CGGCCTGTTTTTGAC TERM 4322 3848494 - 3848478 - gTR 93 -12.3 -3.16647 | overlap 3848477 CGGATTCAGCAAAAC CATGGGC ATT GCCCATG CCGGCCTGTTTTTGA HRM2_34000 3849055 - 3848567 - | putative permease of the major facilitator superfamily HRM2_33990 3847750 - 3848667 + | hypothetical protein TERM 4323 3848855 - 3848836 - GT 73 -3.4 -4.98255 | overlap 3848837 TGTCAACCACAAAAA GCGCCGTG TCTT CATGGCGG AAATAGACCTTTTCC HRM2_34010 3850789 - 3849059 - | ATPase family protein TERM 4324 3849288 - 3849271 - G 72 -9.8 -3.35679 | overlap 3849272 TCCCTGCATGGACAA GGGCCC AGGCCA GGGCCC GGGTCTGGGAAGGAT namA 3852050 - 3850809 - | NamA TERM 4325 3851365 - 3851347 - G 72 -3.8 -4.84359 | TCAGTTTCAGAAAAA CCGTCTTT CAT AAAATCGG CAGAGTTCAATTTAA nfo 3852941 - 3852102 - | Nfo mdtQ 3854295 - 3852961 - | MdtQ TERM 4326 3853858 - 3853843 - G 84 -10.4 -4.07568 | CTGGGCCTGGTAAAA GGCCGT TGCA ACGGCC TTAAGCAGCAATCGC mdtC 3857348 - 3854307 - | MdtC TERM 4327 3854412 - 3854396 - G 70 -2.9 -4.84017 | overlap 3854398 3854399 3854401 AAGTTGCCACAAAAA GACCACC CAT GATGGTG ACGGCCATGGTCGCG TERM 4328 3856036 - 3856056 + g 71 -10.4 -3.11208 | opp_overlap 3856036 3856035, overlap 3856033 AGGATGGCCACAAAG GTGGCTCC CAACA GGGGCCAC TGGTTTTCCCTGACC mdtA 3858487 - 3857345 - | MdtA HRM2_34070 3859190 - 3858504 - | HTH-type transcriptional regulator TERM 4329 3858765 - 3858753 - G 86 -6.9 -5.01732 | AATCTGCTTAAAAAA CCGCC CAA GGCAG GTAAGGTCCGGCACT HRM2_34080 3862455 - 3859378 - | hypothetical protein TERM 4330 3859880 - 3859869 - G 72 -3.6 -4.82901 | opp_overlap 3859875, overlap 3859871 TGCCGTCCAGAAAAA CACC CACA GGCG AGGGCCCTCCCAGGC TERM 4331 3859941 - 3859953 + g 70 -3.3 -4.8622 | overlap 3859931 3859942 CGATCTCCTTGCCCC AGGGA TAT TCCCG TTTTTCCTTACCAGC TERM 4332 3860793 - 3860815 + g 90 -9.2 -4.72272 | CACCATAGGAGGCAT CCAGTTTTCC AAG GGAAAAATGG TTTTTCATGAGGGCC HRM2_34090 3864532 - 3862535 - | hypothetical protein TERM 4333 3863515 - 3863504 - G 71 -5.8 -4.28432 | opp_overlap 3863504 AAGGGCAAGGGAAAA GGGT CTGA ACCC TTTTTCAATGACGTT TERM 4334 3863504 - 3863515 + g 76 -5.8 -4.67011 | opp_overlap 3863504 AAGGGCAAGGGAAAA GGGT CTGA ACCC TTTTTCAATGACGTT TERM 4335 3864073 - 3864053 - G 71 -6.9 -4.20074 | AAACACATCGTAAAA GCCTGTAAA TTT TTTATAGGC CGGATCCTGGAAAAA HRM2_34100 3865160 - 3864822 - | hypothetical protein HRM2_34110 3865793 - 3865176 - | hypothetical protein TERM 4336 3866434 - 3866424 - g 80 -2.4 -5.4505 | opp_overlap 3866424 CTGCTGAACAAAAAA GGTG GGC CCCC TTCCTGAAACGTATG TERM 4337 3866696 - 3866679 - g 71 -6.9 -4.17048 | TGGTCTGCAAAACAA CGGACAG TGCA CTGACCG GTACAAATTTACGTT TERM 4338 3866882 - 3866870 - g 70 -2.7 -4.84274 | GAACTACACGAAAAA GAATT AGA AATCC TCAATATGATTTATT HRM2_34120 3866273 - 3866938 + | putative nicotinamidase-related amidohydrolase TERM 4339 3867178 - 3867166 - f 100 -10.5 -4.3739 | overlap 3867167 GAGTTTCTTATAAAA CCGGC ACG GCCGG AGCGAGGGATGGCTC TERM 4340 3867204 - 3867167 - f 74 -9.7 -3.22113 | overlap 3867166 AGTTTCTTATAAAAC CGGCACGGCCGGAGCGA GGGA TGGCTCCGGCCTCAACG AATTTTGAAACGCCG TERM 4341 3867566 - 3867551 - f 75 -3.2 -5.08255 | opp_overlap 3867553 ATGTTCAAAATAAAA CATCTC CCAT GAGGTG CCTTTTAAGCCGTTT HRM2_34130 3867841 - 3868770 + | putative ABC-type manganese/zinc transport system, substrate-binding component HRM2_34140 3868778 - 3869284 + | hypothetical protein TERM 4342 3869871 - 3869851 - g 82 -7.6 -4.67168 | gap 1, opp_overlap 3869854, overlap 3869852 AAAAATCTGGAAAAA CGCTGGTGG TGGT CCACCA-CG ATCTGTCAACTGCTG HRM2_34150 3869274 - 3870035 + | putative ABC-type manganese/zinc transport system, ATPase component TERM 4343 3870796 - 3870827 + G 73 -5.8 -4.54047 | ATATCTCTGCGTCTG GCTTGATTCTTCCG GCGG CGGAGCGATCATGC TTTTCTGTACACTCC TERM 4344 3871261 - 3871247 - g 80 -2.8 -5.252 | overlap 3871248 TATCTTGACAAAAAA CTTGGA AGC CCCAAA AAAGATCCCCATGGA HRM2_34160 3870035 - 3871294 + | putative ABC-type manganese/zinc transport system, permease component TERM 4345 3871740 - 3871711 - g 81 -13.6 -3.14132 | opp_overlap 3871692 GCGGTGTTTCAGCAA CCTTTGCCGCGG TCAAGG CAGCGGCAAAGG GCGTCAAAGTAACCC TERM 4346 3872918 - 3872907 - g 73 -5.8 -4.58395 | CGCACCCGGGAAAAA GGGT ATTC ACCC AAATGGGTCACCCGG HRM2_34170 3871530 - 3873371 + | putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit HRM2_34180 3873478 - 3873768 + | putative 4Fe-4S ferredoxin HRM2_34190 3874533 - 3873805 - | hypothetical protein TERM 4347 3874107 - 3874091 - G 84 -4.4 -5.3236 | overlap 3874093 3874105 AGAACCCACAAAAAA GCCCTT TGTTG AAAGGC AGATCGGTATTTGCC HRM2_34200 3875305 - 3874526 - | putative glycosyl transferase family protein TERM 4348 3875358 - 3875346 - R 78 -10.5 -3.29043 | AATTCTTTTTTATAA CCGGC ACG GCCGG AGCAAGAAATGGCAT HRM2_34210 3876374 - 3875535 - | putative NADPH-dependent FMN reductase TERM 4349 3876589 - 3876605 + H 95 -8.1 -5.24531 | opp_overlap 3876589 TATTTGACAGAATAA CTGTAAT TAT ATTACAG TTTTTTATAAACCAT TERM 4350 3876605 - 3876589 - H 72 -8.1 -3.88946 | opp_overlap 3876589 TATTTGACAGAATAA CTGTAAT TAT ATTACAG TTTTTTATAAACCAT TERM 4351 3877705 - 3877694 - g 78 -2.2 -5.37345 | TGCAATGATAAAAAA CAGA CAGT TCCG TGAAGACCTCTATTT TERM 4352 3877825 - 3877812 - g 78 -2.4 -5.28176 | TTTATGCACAAAAAA GCAA AAGAGA TTGC ATTCCCGGGCATCCC HRM2_34220 3876657 - 3878231 + | sigma-54 dependent two component transcriptional regulator TERM 4353 3878414 - 3878442 + T 70 -3.9 -4.84363 | opp_overlap 3878422, overlap 3878440 GATATTGCTGGACAT TGGATTAATCTTG ACG CAAGAATCATTCA TTTTTAGTGATTTAA TERM 4354 3878649 - 3878633 - T 73 -3.8 -4.99861 | CATGAATGACAAAAA TCAAAA AATCA TTTTGA TACCGGAGCGTTGGG HRM2_34230 3880522 - 3878969 - | transposase (IS4 family protein) mcpB2 3880639 - 3882264 + | McpB2 TERM 4355 3883021 - 3883045 + G 76 -7.9 -4.36914 | gap 1 GTTTCCGTCATGGAG GCTC-TCCGG GAGGCG CCGGAGGAGC TTTTGTGGAAAGCAA HRM2_34250 3883015 - 3883920 + | Phage integrase/recombinase family protein TERM 4356 3883921 - 3883935 + F 85 -4.2 -5.48303 | overlap 3883921 3883919 3883922 GCGGTCAGGTATTGA TGGATG CTC CATCCC TTTTTTTACGGTTCT TERM 4357 3883922 - 3883934 + F 72 -7.7 -3.87355 | overlap 3883921 3883919 3883921 CGGTCAGGTATTGAT GGATG CTC CATCC CTTTTTTTACGGTTC TERM 4358 3884079 - 3884112 + F 100 -19.1 -3.29511 | opp_overlap 3884079 GCAGAGGATATTAAA TCCTTACCGCCACAA TATA TTGTGGTGGTAAGGA TTCTCAAAAAGTGGA TERM 4359 3884112 - 3884079 - f 100 -16.9 -3.8766 | opp_overlap 3884079 GCAGAGGATATTAAA TCCTTACCGCCACAA TATA TTGTGGTGGTAAGGA TTCTCAAAAAGTGGA HRM2_34260 3884395 - 3884613 + | two-component sensory box histidine kinase/response regulator HRM2_34270 3885121 - 3886203 + | two-component response regulator fusion protein (N:response regulator receiver-C:HD-GAF domain protein) HRM2_34280 3886358 - 3887212 + | two component sensory box hisitidine kinase/LuxR domain protein TERM 4360 3887584 - 3887572 - g 81 -6.3 -5.02476 | ATACGCTTGAAAAAA TCCAA TCC TTGGA AAATAAATTGGGCTT HRM2_34290 3887430 - 3887624 + | hypothetical protein TERM 4361 3887664 - 3887698 + G 89 -10.9 -4.37092 | gap 1, opp_overlap 3887663 GCTCTGTTGAGAGAG TTGGGCTTGAACAGGT GGAG GCTTGTTCA-GCCCAA TTTTATGGGAAACAT HRM2_34300 3887624 - 3887953 + | hypothetical protein TERM 4362 3888529 - 3888515 - g 73 -2.8 -5.00895 | opp_overlap 3888515 GCGATCAGAGAAAAA GCAGAT ATG ATTTGC ATTTCTTCAAGTCTC mtbC2 3888077 - 3888739 + | MtbC2 TERM 4363 3889098 - 3889082 - T 72 -10.1 -2.9006 | opp_overlap 3889086 3889089, overlap 3889073 AATCTACCCCATAGA CGAGGGA GGG CCCCTCG GAGCCGCCTTTCAGG TERM 4364 3889427 - 3889396 - T 100 -11.1 -5.27938 | gap 1, opp_overlap 3889393 3889398 3889400 AGTTGTAAACAAAAA TAGACCATT-CGCT AAAAA AGCGTAATGGTCTA TCCTGATTTAATTAT TERM 4365 3889398 - 3889425 + T 71 -9.3 -2.90456 | gap 1, opp_overlap 3889396, overlap 3889393 3889400 TTGTAAACAAAAATA GACCATT-CGCT AAAAA AGCGTAATGGTC TATCCTGATTTAATT HRM2_34320 3890299 - 3889553 - | ATPase family protein HRM2_34330 3891911 - 3890223 - | hypothetical protein TERM 4366 3890381 - 3890411 + gr 80 -2.4 -5.47914 | TCTGGTTATGCTGAA GGATTTGCTTTGCC ATG GGCATGGAAAGACC TTTTTTATAATTTTT TERM 4367 3890477 - 3890493 + gr 76 -5.1 -4.83169 | GCTCCAAAAAGGCGA TGATCTG ATC CAGCTCA TTTTTGTCCGGCAAT TERM 4368 3891755 - 3891769 + gr 86 -5.6 -5.28683 | opp_overlap 3891746 CAAGTAGGAGTGGCC CCGGAA TAA TGCCGG TTTTTTGATATTGAT TERM 4369 3891804 - 3891821 + gr 80 -2.6 -5.52023 | overlap 3891805 GTAATATTTTTTACT TGCTCG TTTGGC CGAGCC TTTTTTGTTCATGAT HRM2_34340 3892479 - 3891898 - | putative DNA modification methylase family protein TERM 4370 3892265 - 3892248 - G 74 -9.9 -3.61715 | opp_overlap 3892247 3892246 CATTGTTGGGAAGAA TGTCTCC AATT GGAGACA GATTGTTGATAACCT dnaG5 3892850 - 3892479 - | DnaG5 HRM2_34360 3893549 - 3893151 - | hypothetical protein HRM2_34370 3894067 - 3894480 + | hypothetical protein cheW1 3894499 - 3895011 + | CheW1 TERM 4371 3895088 - 3895077 - g 70 -4.4 -4.72986 | TATTGGTATGAAAAA CCTA AGTT TAGG ATTAAAGATCACATC TERM 4372 3895508 - 3895480 - g 71 -10.3 -3.14307 | overlap 3895478 ACCAATGCAAAATTA GCTGAAGGCAGGA ATA TCCTGAATTCAGC GGCCGAAGAATACAT cheT 3895069 - 3897393 + | CheT TERM 4373 3899074 - 3899061 - g 70 -3.1 -4.87803 | CATGTTGAAACAAAA GACCA TAAA TGATC CATCACTCAGCCAAA TERM 4374 3899658 - 3899629 - g 76 -4.4 -4.96848 | gap 1 TCCGGCATAGAAAAA TTCAGAGGGCAAT TGAAC ATTGCC-TCGGAA AAAGGCAGGGGCACA cheA1 3897910 - 3900120 + | CheA1 HRM2_34410 3900182 - 3900577 + | putative oxygen-binding myohemerythrin (MHR) TERM 4375 3900974 - 3900934 - g 79 -7.1 -4.65933 | overlap 3900937 CATCGGCAAAAGAAA TTACATGGCCCTTAAAAAA ATG TTTTTTAAGAACAATGTGA TGATCAACAAGCAGG cheD1 3900605 - 3901084 + | CheD1 HRM2_34430 3901081 - 3901929 + | putative chemotaxis signal transduction protein HRM2_34440 3901948 - 3902373 + | putative chemotaxis response regulator receiver (CheY-like) TERM 4376 3902377 - 3902389 + GF 100 -7.7 -5.252 | opp_overlap 3902376 3902377 TTCGATTTCTGAAAT CATGG AAA CCATG TTTTTTATGCCGGTG HRM2_34450 3902330 - 3902776 + | hypothetical protein TERM 4377 3903217 - 3903200 - g 74 -4.8 -4.7497 | TTTATGGAGCAAAAA GGATGG CTTCAC CCACCC AGAACACTGAAAAAA cheB1 3902800 - 3903846 + | CheB1 cheR1 3903871 - 3904653 + | CheR1 TERM 4378 3904857 - 3904873 + G 70 -2.3 -4.99056 | GAAGAAAAGGATCGG TGGAATG AAC CATTTTA TTTTTCCTTATATTG TERM 4379 3905080 - 3905069 - g 70 -3 -4.86033 | AAATTGCCAGAAAAA TTCT TATG AGAA ACCAGATACCGATCA cheD2 3904702 - 3905214 + | CheD2 TERM 4380 3905199 - 3905234 + F 73 -9.8 -2.91695 | overlap 3905196 CCGGGACATGGACTG GTACCCCTACCAATGA GGTG TTATTGGGAGCGGTAC TAATTTAACAATCAC TERM 4381 3906076 - 3906087 + G 73 -5.8 -4.57073 | TCTGTGCATCATATG CTGG CCCA CCAG TTTTTAAAGGAACTC HRM2_34490 3905281 - 3906645 + | two-component fusion protein (N:response regulator receiver-C:ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component) TERM 4382 3906951 - 3906968 + G 70 -4.9 -4.71061 | GAAAATATATTTTCT GACGATA TAGA TATTGTC TTTTTAGATGTAAAT HRM2_34500 3906807 - 3908261 + | sigma-54 dependent DNA-binding response regulator TERM 4383 3908329 - 3908310 - f 71 -2.2 -5.24531 | ATTGGCTACAAAAAA CTTTTTTA GCAA TAGAAAAG CCGGAAGGGATTTCC TERM 4384 3908719 - 3908701 - g 72 -3.8 -4.87592 | GCACATATAAGAAAA TCCGTCAT AGC AAAACGGA TAACCCATTGAAATA HRM2_34510 3908431 - 3908730 + | hypothetical protein TERM 4385 3908790 - 3908769 - T 71 -4.5 -4.61231 | gap 1 TTATATTCCCAAAAA TTCG-GGCTA AAA TAGCCTCAAA AACGGGAACCTTAAT HRM2_34520 3909004 - 3908837 - | hypothetical protein rlgA2 3909670 - 3909089 - | RlgA2 HRM2_34540 3910104 - 3911603 + | TPR domain family protein HRM2_34550 3912035 - 3911736 - | hypothetical protein HRM2_34560 3912754 - 3913041 + | hypothetical protein TERM 4386 3913408 - 3913398 - g 79 -8.2 -4.32034 | opp_overlap 3913405 CGATGACCAGCAAAA GCCG TTC CGGC GCCATTTGGGCGCCA TERM 4387 3913512 - 3913535 + G 78 -2.4 -5.34055 | gap 1, opp_overlap 3913517, overlap 3913514 3913515 TGAAAAGGATATGCA G-ATCAGCCAC AGT GTTGCTGGTTC TTTTTTCCTCTTTAT TERM 4388 3913514 - 3913532 + G 73 -5.2 -4.71318 | opp_overlap 3913517, overlap 3913512 3913515 AAAAGGATATGCAGA TCAGCCAC AGT GTTGCTGG TTCTTTTTTCCTCTT narK 3913360 - 3914553 + | NarK guaA2 3915270 - 3914578 - | GuaA2 HRM2_34590 3915405 - 3915845 + | hypothetical protein TERM 4389 3916294 - 3916254 - g 74 -11 -3.14963 | opp_overlap 3916255 TGGACAAGGACGCAA GGCCTGTCTGTCCGGCAA TTTTG TGGCCGGACAGCCGGGCA TTAAAAGAAGGGGCC TERM 4390 3916826 - 3916816 - g 79 -5.4 -5.00616 | GCCCTGGGGAAAAAA TCTG TAC CAGA TCGGTGGCCCCAGCC HRM2_34600 3915983 - 3917467 + | putative sugar (pentulose and hexulose) kinase TERM 4391 3917700 - 3917715 + G 80 -3.2 -5.29742 | CTACGGCACGGCAAT GGTCGG AAGC CTGATC TTTATTTTTTTCTGT TERM 4392 3918288 - 3918302 + G 79 -5.6 -4.91511 | AATAAAGGTTATCGG CCTGAC CCT GTCTGG TTTTTGTGCTGGCCT rbsC 3917665 - 3918606 + | RbsC TERM 4393 3919283 - 3919310 + G 79 -7.6 -4.49316 | opp_overlap 3919282, overlap 3919284 GGGCAAATTCAAAGG CGTCTGGGCCTC TTTT GATGCCCAGGCA TTTATTATTGATGAT TERM 4394 3919284 - 3919309 + G 76 -11.1 -3.28505 | opp_overlap 3919282, overlap 3919283 GGCAAATTCAAAGGC GTCTGGGCCTC TTTT GATGCCCAGGC ATTTATTATTGATGA rbsB 3918642 - 3919604 + | RbsB TERM 4395 3919654 - 3919694 + G 74 -9.7 -3.59979 | opp_overlap 3919654 3919657 3919659, overlap 3919655 AAATCCAATCCATAA GCAGACATTTTGGGGCGGT CAA AGCGCTCCAGAATGTCAGA TTTACGGTCAAAAAA TERM 4396 3919655 - 3919693 + G 79 -13.2 -2.75844 | opp_overlap 3919654 3919657 3919659, overlap 3919654 AATCCAATCCATAAG CAGACATTTTGGGGCGGT CAA AGCGCTCCAGAATGTCAG ATTTACGGTCAAAAA TERM 4397 3920348 - 3920321 - g 79 -7 -4.62336 | opp_overlap 3920324 ATGTGACTTGAAAAA CACTTCTCCCCG GGAC CTGGGAAAAATG ATTATAAACGGAGAA rbsA2 3919623 - 3920390 + | RbsA2 HRM2_34640 3921085 - 3920453 - | hypothetical protein HRM2_34650 3921302 - 3921147 - | hypothetical protein HRM2_34660 3921937 - 3921545 - | hypothetical protein HRM2_34670 3922272 - 3921970 - | hypothetical protein TERM 4398 3922620 - 3922638 + G 72 -3.8 -4.84311 | opp_overlap 3922618 3922620 3922622, overlap 3922618 ATCTGAAACAGCACA TACCTGCT TCG GGCATGTA TTTTGTTGTGTACGA HRM2_34680 3922511 - 3924088 + | sigma-54 dependent DNA-binding response regulator HRM2_34690 3924967 - 3924329 - | putative iron-sulfur flavoprotein HRM2_34700 3926062 - 3925175 - | putative 2-nitropropane dioxygenase (Nitroalkane oxidase) (2-NPD) HRM2_34710 3926930 - 3926244 - | putative (S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (DEHC) HRM2_34720 3927683 - 3927030 - | putative iron-sulfur flavoprotein TERM 4399 3927993 - 3928005 + r 91 -10.5 -4.128 | GAACCATAACTCGCT CCGGC CGT GCCGG TTTATATGTAACACT HRM2_34730 3929638 - 3928382 - | transposase for insertion sequences IS116, IS110 and IS902 (IS111A/IS1328/IS1533 family protein) TERM 4400 3928601 - 3928618 + g 86 -2.7 -5.5604 | gap 1 CAGTTTGTAATATTT GGC-CTTG TAA TAAGAGCC TTTTTTCTTGATTGC TERM 4401 3928995 - 3929007 + g 100 -5.5 -5.7946 | overlap 3928996 CCATTAAGGCTTTTA TGCAG TTC CTGCG TTTTTTTCTTAAGGC HRM2_34740 3930130 - 3929849 - | hypothetical protein TERM 4402 3930477 - 3930459 - g 70 -4.6 -4.61873 | overlap 3930476 GGGGAGAAATTAAAA GATTTTAC ACT GTCAAATC ACCTGGGTGAAAACA HRM2_34750 3930309 - 3930959 + | putative peroxiredoxin family protein TERM 4403 3930946 - 3930968 + F 79 -8.5 -4.11216 | opp_overlap 3930946 TGAACGTGCTTAAAA CACTGGTGA AATAA TTACCAGTG TTTTGCCGATACCAG TERM 4404 3931660 - 3931674 + G 73 -5.6 -4.70659 | opp_overlap 3931660 3931662, overlap 3931662 CTTGATCCTTCAAAA CAGCTG TTG CAGCAG TTTTTGGATCTCAAC metE 3931051 - 3932157 + | MetE TERM 4405 3932168 - 3932153 - f 86 -7.6 -4.68506 | AATTAATTTCAAAAA TGTAGC AGAT GCTACA GACAGGGTTATAAAA TERM 4406 3932481 - 3932499 + G 70 -4.5 -4.65078 | TTCTTAAGTCAACGA CCGGTCA ACAGA TGGCTGG TTTTATTACCCATAT HRM2_34770 3932255 - 3932770 + | putative flavodoxin family protein TERM 4407 3932783 - 3932771 - f 78 -10.5 -3.29461 | overlap 3932772 GAACTCTTTGTATAA CCGGC ACG GCCGG AGCGTGATATCTGCT TERM 4408 3932888 - 3932834 - f 100 -8.4 -4.79683 | gap 1, opp_overlap 3932839 3932840 3932845 3932850, overlap 3932825 3932839 3932845 AACGCATAAAATAAA TATATCTTAAACATAATGGCGTATA ACTTGA TATATGCCATTATGTTTAA-ATTTA GACCATCCAGTTTTA TERM 4409 3932839 - 3932884 + F 100 -13 -3.55563 | opp_overlap 3932825 3932834 3932839 3932845, overlap 3932840 3932845 3932850 ATAAAATAAATATAT CTTAAACATAATGGCGTATA ACTTGA TATATGCCATTATGTTTAAA TTTAGACCATCCAGT TERM 4410 3932884 - 3932839 - f 91 -13 -2.72791 | opp_overlap 3932839 3932840 3932845 3932850, overlap 3932825 3932834 3932845 ATAAAATAAATATAT CTTAAACATAATGGCGTATA ACTTGA TATATGCCATTATGTTTAAA TTTAGACCATCCAGT TERM 4411 3932840 - 3932883 + F 100 -16.5 -2.73124 | opp_overlap 3932825 3932839 3932834 3932845, overlap 3932839 3932845 3932850 TAAAATAAATATATC TTAAACATAATGGCGTATA ACTTGA TATATGCCATTATGTTTAA ATTTAGACCATCCAG TERM 4412 3932878 - 3932845 - f 80 -9.8 -3.67954 | opp_overlap 3932845 3932840 3932839 3932850, overlap 3932839 3932834 TAAATATATCTTAAA CATAATGGCGTATA ACTTGA TATATGCCATTATG TTTAAATTTAGACCA TERM 4413 3932845 - 3932878 + F 100 -12 -3.84451 | opp_overlap 3932839 3932834 3932845, overlap 3932840 3932839 3932850 TAAATATATCTTAAA CATAATGGCGTATA ACTTGA TATATGCCATTATG TTTAAATTTAGACCA TERM 4414 3932987 - 3933031 + F 73 -7.2 -4.1552 | gap 2, opp_overlap 3932974 3932973 3933011, overlap 3932989 ATTGCCCTCCCCCAT GT-GGA-AGGGCCTGCCGGATT TAA AGATTGGCAGGCCCTATCCTGC TTTCTTGAAAGAGTA TERM 4415 3932989 - 3933028 + F 86 -12.2 -3.10244 | gap 1, opp_overlap 3932974 3932973 3933011, overlap 3932987 TGCCCTCCCCCATGT GGA-AGGGCCTGCCGGATT TAA AGATTGGCAGGCCCTATCC TGCTTTCTTGAAAGA TERM 4416 3933839 - 3933851 + G 79 -9.1 -4.27443 | opp_overlap 3933838 3933836 3933839, overlap 3933836 GGTTGTAAAACAGAT GGGCT CGA AGCCC TTATTTTAATGGTGG HRM2_34780 3933296 - 3934090 + | hypothetical protein HRM2_34790 3934350 - 3935336 + | hypothetical protein TERM 4417 3935692 - 3935720 + T 70 -7.4 -3.74626 | opp_overlap 3935691 GTGACTGAAGTATAG GGGCAGTGAG GTTACACCA CGCACTGCCC TTTCCATACTTTGGT HRM2_34800 3936652 - 3935804 - | transposase (IS150 family protein) HRM2_34810 3936914 - 3936633 - | transposase (IS3/IS911 family protein) TERM 4418 3937502 - 3937536 + H 100 -17.4 -4.28656 | opp_overlap 3937495 3937493 3937510 3937514 ATTTAATATTTTTTT GCAATCTATATACCAC CAT GTGGCATATAGATTGC TTTTAACTATTAAGT TERM 4419 3938126 - 3938138 + G 76 -5.5 -4.86731 | opp_overlap 3938126 GCACTGGTAATACCA CCGAG CCA TTCGG TTTTATTTCAACGGA TERM 4420 3938185 - 3938196 + G 70 -2.2 -4.9138 | CTTTTCAGAAACAGT GCTA ATGA TGGC TTTTCTTTAGATAAT HRM2_34820 3937621 - 3938358 + | hypothetical protein TERM 4421 3938415 - 3938444 + T 100 -19.5 -4.03234 | opp_overlap 3938415 CACAAAACAAAAAAA GTCCTGACCATCA TAAA TGATGGTCAGGAC TTTATATGAACCGGC TERM 4422 3938444 - 3938415 - T 100 -19.5 -6.14618 | opp_overlap 3938415 CACAAAACAAAAAAA GTCCTGACCATCA TAAA TGATGGTCAGGAC TTTATATGAACCGGC TERM 4423 3938467 - 3938455 - T 78 -10.5 -3.272 | opp_overlap 3938451 3938448 3938447 3938455, overlap 3938456 AGGACTTTATATGAA CCGGC ATG GCCGG AGCATGATATCTGCT TERM 4424 3938693 - 3938681 - T 89 -10.5 -4.04474 | AGAGTTTCATATAAA CCGGC ACG GCCGG AGCGGGGGATCTGCC selD2 3939939 - 3938890 - | SelD2 TERM 4425 3939905 - 3939917 + g 70 -3.3 -4.80853 | opp_overlap 3939903 3939905 CCGGCACCAGCAACA GACTC GGT GAGCC TTATTTTTTTAGAAT HRM2_34840 3940302 - 3940069 - | hypothetical protein TERM 4426 3941304 - 3941292 - g 70 -9.1 -3.53343 | AACTTGCCGGCCAAA GCCTG CCC CAGGC CCAGACGCATTTAAA iscS1 3940523 - 3941665 + | IscS1 TERM 4427 3941730 - 3941759 + T 100 -13.7 -3.49475 | opp_overlap 3941730 CACAAAACAAAAAAA GTCCTGACCATCA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 4428 3941759 - 3941730 - T 100 -15.9 -6.14618 | opp_overlap 3941730 CACAAAACAAAAAAA GTCCTGACCATCA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 4429 3942037 - 3942013 - T 91 -4.9 -5.63857 | AAAAACCCAAAAAAA GCAGGGGCC AAATGAG AGTCCCTGC CTTCAAAAATGAATT TERM 4430 3942072 - 3942060 - T 80 -10.5 -3.56216 | AATGAATTTATATAA CCGGC ACG GCCGG AGCGAGGTATGGCTT HRM2_34870 3942326 - 3942150 - | hypothetical protein TERM 4431 3943742 - 3943728 - R 88 -10 -4.21141 | TGTCAATAAATCAAA CGGCAA AAT TTGCCG AACCAGGCGCTCAAT TERM 4432 3943889 - 3943860 - R 100 -15.9 -6.14618 | opp_overlap 3943860 CACAAAACAAAAAAA GTCCTGACCATCA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 4433 3943860 - 3943889 + r 100 -13.7 -3.49475 | opp_overlap 3943860 CACAAAACAAAAAAA GTCCTGACCATCA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 4434 3945717 - 3945733 + r 83 -9.4 -3.93963 | TTGGGCTATCGGCGA GGGGGT TTCTC ACCCCC TTTATCGCTACTCAT TERM 4435 3948220 - 3948209 - R 70 -7.2 -3.85698 | opp_overlap 3948217 GTTTCGGTCCAGAAA GGCG CCTT CGCC ACCGGTGTTCCTCCT TERM 4436 3949004 - 3948974 - R 83 -11.3 -3.03635 | opp_overlap 3948969 3949003, overlap 3949003 TAAATTCTTTGAATA TCTTTTGTGTGCT TTCAC AGCACTCAAAAGA CACGCTTCGTCTCTT TERM 4437 3949131 - 3949086 - R 87 -4.8 -5.47159 | gap 1 CCTGAACACAAAAAA GTCTTTGTAAGAAGCGTT-GT GAAAA ACGTTCGCGTCTCACAAAGAC TCAGCGGTTCTACAT HRM2_34910 3950595 - 3949402 - | hypothetical protein TERM 4438 3950829 - 3950842 + H 75 -5.2 -4.77036 | overlap 3950820 CATGCTCTGGCCAAG CCGG TTCTAT CCGG TTTTTAATGCTGCAA HRM2_34920 3950942 - 3953401 + | putative lysine 2,3-aminomutase TERM 4439 3953438 - 3953406 - T 90 -11.2 -4.03174 | opp_overlap 3953402, overlap 3953408 3953409 AAATCGACTAAACAA CATGGCCGGAGCAG GGTAT CTGCTCCGGCCGAA TCAATATCTCCAGCT TERM 4440 3953436 - 3953408 - T 100 -16 -3.59653 | opp_overlap 3953402, overlap 3953406 3953409 ATCGACTAAACAACA TGGCCGGAGCAG GGTAT CTGCTCCGGCCG AATCAATATCTCCAG TERM 4441 3953435 - 3953409 - T 100 -19.5 -2.75069 | opp_overlap 3953402, overlap 3953408 3953406 TCGACTAAACAACAT GGCCGGAGCAG GGTAT CTGCTCCGGCC GAATCAATATCTCCA HRM2_34930 3954578 - 3953466 - | ABC-type spermidine/putrescine transport system, ATPase component TERM 4442 3954555 - 3954566 + g 70 -2.2 -5.04987 | GAACTTCACAAATGC GGGA TCTT TCTC TTTTTTCGACATCTT TERM 4443 3954623 - 3954644 + r 71 -10.1 -2.71263 | opp_overlap 3954621 3954620 3954636 TGAACTTCAGAACCC GCGGGGGAA AAAT TTCCCCCGG TACTTGGGAACAATT HRM2_34940 3955870 - 3954710 - | ABC-type spermidine/putrescine transport system, periplasmic substrate-binding component HRM2_34950 3956757 - 3955966 - | ABC-type spermidine/putrescine transport system, permease component II HRM2_34960 3957623 - 3956763 - | ABC-type spermidine/putrescine transport system, permease component I HRM2_34970 3959291 - 3957660 - | putative metal-dependent hydrolase (TIM-barrel fold family protein) prdF1 3960328 - 3959291 - | PrdF1 TERM 4444 3960097 - 3960129 + g 73 -12 -2.50816 | opp_overlap 3960112 3960114, overlap 3960096 TTACCCCTTCAGTGA CCAGGGCTGCAAGC ACACC GCTTCCACCCCTGG GTTCCTGGGTGAGAA TERM 4445 3961145 - 3961172 + G 71 -5.4 -4.52047 | gap 1, overlap 3961149 TATCAAGCCTTGTGG GGATCGG-CGGGG GAA CCCTGTCCGTGCC TTTTATGATGTGGTG HRM2_34990 3960679 - 3961476 + | hypothetical protein HRM2_35000 3963088 - 3961784 - | TRAP-type C4-dicarboxylate transport system, large permease component TERM 4446 3962578 - 3962558 - G 83 -9.7 -4.17958 | overlap 3962548 3962547 AATACCGGCAATAAA CAGCTTGCC GAT GGAAAGCTG GGTGAGGATACCGTA HRM2_35010 3963548 - 3963081 - | TRAP-type C4-dicarboxylate transport system, small permease component HRM2_35020 3964864 - 3963698 - | TRAP-type C4-dicarboxylate transport system, periplasmic component TERM 4447 3964190 - 3964202 + g 73 -10.5 -3.27298 | opp_overlap 3964185 CATGGAAACAGGTGT GGCCC CAA GGGCC TTGATCATTCCGGCA TERM 4448 3964898 - 3964887 - H 85 -5.8 -5.24129 | overlap 3964889 CTTTCCCATAAAAAA CCCT GACC AGGG CAGCCCAGGTACTGC TERM 4449 3965316 - 3965302 - H 84 -2.8 -5.66926 | GCAAAAAAAATAAAA TGAATG ATG CATACA AAATAGCCAGAATTA TERM 4450 3965805 - 3965815 + G 72 -4 -4.87626 | TCAGTTCAACCAGGG TTTC AAA GAAA TTTTTGGTATTACGC HRM2_35030 3965433 - 3965927 + | putative methylphosphotriester-DNA alkyltransferase alkA 3965671 - 3966732 + | AlkA HRM2_35050 3966746 - 3966901 + | putative methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) HRM2_35060 3967477 - 3966944 - | hypothetical protein TERM 4451 3968290 - 3968269 - R 74 -10.1 -3.1203 | opp_overlap 3968269, overlap 3968267 3968265 TAACCATTTAAGATA GGGCAGAGC TTCG GCTTTGCCC TTTTGACATGAAAGG TERM 4452 3968269 - 3968290 + r 100 -12.3 -4.13767 | opp_overlap 3968269 3968267 3968265 TAACCATTTAAGATA GGGCAGAGC TTCG GCTTTGCCC TTTTGACATGAAAGG TERM 4453 3968409 - 3968378 - R 84 -3.9 -5.49809 | gap 1, opp_overlap 3968404, overlap 3968383 3968404 GAAACCCCAAAAAAA CAGAAGCCTTTTTT CAAAT AAAAAAAGC-CCTG ATCATACATTTACGT TERM 4454 3968405 - 3968383 - R 70 -5.7 -4.2757 | opp_overlap 3968404, overlap 3968378 3968404 CCCAAAAAAACAGAA GCCTTTTTT CAAAT AAAAAAAGC CCTGATCATACATTT TERM 4455 3968435 - 3968404 - R 100 -18.2 -5.95539 | opp_overlap 3968404, overlap 3968383 3968378 TTTCAAATAAAAAAA GCCCTGATCATACA TTTA CGTATGATCAGGGC TTTATAAAAATAACC TERM 4456 3968404 - 3968435 + r 100 -17.5 -3.87815 | opp_overlap 3968383 3968378 3968404 TTTCAAATAAAAAAA GCCCTGATCATAC ATTTAC GTATGATCAGGGC TTTATAAAAATAACC TERM 4457 3970262 - 3970278 + r 83 -9.4 -3.93963 | TTGGGCTATCGGCGA GGGGGT TTCTC ACCCCC TTTATCGCTACTCAT TERM 4458 3972925 - 3972914 - R 70 -7.2 -3.85698 | opp_overlap 3972922 GTTTCGGTCCAGAAA GGCG CCTT CGCC ACCGGTGTTCCTCCT TERM 4459 3973709 - 3973679 - R 83 -11.3 -3.03635 | opp_overlap 3973674 3973708, overlap 3973708 TAAATTCTTTGAATA TCTTTTGTGTGCT TTCAC AGCACTCAAAAGA CACGCTTCGTCTCTT tyrS 3975248 - 3973953 - | TyrS HRM2_35130 3976818 - 3975256 - | KH domain/HD domain family protein TERM 4460 3977129 - 3977144 + r 73 -9 -3.52192 | CTTGCACAACAGTGT CAGGGT GGAT ACCCTG TTCTGTAGCATTAGG HRM2_35140 3977558 - 3977229 - | hypothetical protein HRM2_35150 3978671 - 3977874 - | predicted nucleoside-diphosphate-sugar pyrophosphorylase TERM 4461 3978688 - 3978662 - G 100 -15.2 -4.64861 | opp_overlap 3978661 3978660 CTCCCCTAAAAGAAA GGGGGCGCATAT AAT ACATGCACCCCC CCTTTGCTTTGTCAG atpC2 3979151 - 3978744 - | AtpC2 TERM 4462 3978950 - 3978987 + g 71 -11.3 -2.82623 | opp_overlap 3978949 3978952 3978963, overlap 3978963 GCACCTCAGCAAATC CACCGTTGACAAAGAGA ACCC TCTCTTTGCCGGCGGCG TCCTTGTAGCGCAGA atpD2 3980584 - 3979166 - | AtpD2 atpG2 3981530 - 3980634 - | AtpG2 TERM 4463 3980888 - 3980902 + g 82 -8.5 -4.58585 | GTTCGCAGATATGTT CGGCC AAATA GGCCG TTTCTTCTTTGGCTC TERM 4464 3981135 - 3981145 + g 91 -5.4 -5.40474 | GTACTGGTCGTCAAT TGTC ATG GACA TTTTTTTAGCCCAAT atpA2 3983115 - 3981601 - | AtpA2 TERM 4465 3982345 - 3982329 - G 74 -9.5 -3.53224 | CAGCCTGTTTGGAAA GATCATC ATA GATGATC AGGGCATGCTCGCCC atpH 3983666 - 3983115 - | AtpH atpF2 3984268 - 3983666 - | AtpF2 atpF3 3984693 - 3984268 - | AtpF3 TERM 4466 3984404 - 3984422 + g 76 -3.2 -5.06961 | TTGGACTGAGCCGTT TTGTTGAT CCG GTCAATAA TTTCTTTTTCTTCCT rodA 3985962 - 3984859 - | RodA TERM 4467 3985479 - 3985461 - G 73 -3 -4.98857 | overlap 3985462 3985464 3985465 AGGCAACCAGAAAAA GCAGCAGC AGG GCTGTTCC AAGATCGGGTTGTTT mrdA 3987808 - 3985955 - | MrdA TERM 4468 3986325 - 3986343 + g 70 -8 -3.67389 | TCCAGGGTCTTTTTT CCAGCGGG AAG TCCGCCGG TTATCTCTGGTTTCT TERM 4469 3987732 - 3987718 - G 76 -2.8 -5.08824 | overlap 3987704 3987719 CCTGGAGGTAAAAAA GTCTTG CCC CAAGAA CGGCAAAGGCAATGA HRM2_35250 3988357 - 3987830 - | putative rod shape-determining protein MreD mreC 3989211 - 3988354 - | MreC mreB 3990262 - 3989216 - | MreB TERM 4470 3989935 - 3989952 + g 72 -9.9 -3.48378 | opp_overlap 3989929 3989930, overlap 3989930 3989933 CAATAACAATCCGTG GACGAAC CAGG GTTCGTC TGTTGTTGTGAACCT HRM2_35280 3991438 - 3990371 - | putative beta-lactamase class C protein HRM2_35290 3992337 - 3991438 - | putative microcin C7 resistance protein MccF TERM 4471 3992487 - 3992453 - R 100 -21.4 -6.0427 | AGGATACAAAAAAAA GAGCGGCAACCCGGCA TTC TGCCGGGCAGCCGCCC TGTCAATCAATCAAT mnhD1 3994402 - 3992540 - | MnhD1 TERM 4472 3992952 - 3992930 - G 74 -7.6 -4.17762 | overlap 3992927 TACCCCGTAAAAGAA GAGCAGGGTG TCC CACTCCGCCC GGGAAATTCGCTCCA TERM 4473 3994877 - 3994854 - R 72 -9.6 -3.1243 | opp_overlap 3994854, overlap 3994853 CATTTAAAATCAAAG GCTTTCATCG ATTT CGGTGAAAGC TTTTTTTGTTTTCAT TERM 4474 3994854 - 3994877 + r 100 -11.8 -6.11229 | opp_overlap 3994854 3994853 CATTTAAAATCAAAG GCTTTCATCG ATTT CGGTGAAAGC TTTTTTTGTTTTCAT TERM 4475 3994944 - 3994986 + r 81 -10.7 -3.27639 | opp_overlap 3994949, overlap 3994945 3994947 AAGTTAAGTGAAGAA ACAAAGGCCCACTATCTTT AATCA AAAGATAGTGGGCCTATAC GTTTTATGGATATTC TERM 4476 3994945 - 3994987 + r 82 -8 -4.47873 | gap 2, opp_overlap 3994949, overlap 3994944 3994947 AGTTAAGTGAAGAAA C--AAAGGCCCACTATCTTT AATCA AAAGATAGTGGGCCTATACG TTTTATGGATATTCT TERM 4477 3994947 - 3994983 + r 100 -16.8 -2.80791 | opp_overlap 3994949, overlap 3994944 3994945 TTAAGTGAAGAAACA AAGGCCCACTATCTTT AATCA AAAGATAGTGGGCCTA TACGTTTTATGGATA TERM 4478 3994981 - 3994949 - R 100 -19.4 -4.70117 | opp_overlap 3994947 3994944 3994945 AAGTGAAGAAACAAA GGCCCACTATCTTT AATCA AAAGATAGTGGGCC TATACGTTTTATGGA HRM2_35320 3995526 - 3995044 - | putative cyclic nucleotide-binding protein TERM 4479 3995317 - 3995339 + g 73 -6.3 -4.46212 | opp_overlap 3995316 3995319, overlap 3995319 ATCAATGGAATTAAC CATCACCGA GATTG TCGGTGATA TTTTCTGCTCAAGCA TERM 4480 3995319 - 3995337 + g 75 -8.9 -3.84183 | opp_overlap 3995316 3995319, overlap 3995317 CAATGGAATTAACCA TCACCGA GATTG TCGGTGA TATTTTCTGCTCAAG mnhA1 3997323 - 3995551 - | MnhA1 TERM 4481 3996698 - 3996675 - G 87 -4.4 -5.47821 | gap 1 ATGCACTCAAAAAAA CCG-TGCCGCC AAT GGTGGCCTCGG GATAGGCGTCGGTGA HRM2_35340 3997564 - 3997316 - | hypothetical protein mnhA2 3999207 - 3997723 - | MnhA2 TERM 4482 3997909 - 3997894 - G 86 -5.4 -5.28778 | overlap 3997896 ATCACTCAGAAAAAA GGCGTT GTAA AACACC GGGAAGAAGTAAGCT TERM 4483 3998032 - 3998017 - G 82 -10.4 -3.86346 | overlap 3998018 CCACTTGCTGATAAA TCCCCC ACAG GGGGGA AGCCCCACAACGGAC TERM 4484 3998030 - 3998018 - G 70 -10.5 -2.91593 | overlap 3998017 CACTTGCTGATAAAT CCCCC ACA GGGGG GAAGCCCCACAACGG mnhD2 4000720 - 3999209 - | MnhD2 TERM 4485 3999663 - 3999652 - G 76 -5.8 -4.65895 | TCTTCCAGGCAAAAA TGGC CGCT GCCA TGAACAGACAAAGGG TERM 4486 4000602 - 4000591 - G 87 -7.2 -4.96996 | CCGAAACAAAAGAAA CGGC CAGG GCCG CAACCCCAATGGGAA mnhC 4001151 - 4000708 - | MnhC mnhB 4002095 - 4001154 - | MnhB TERM 4487 4001752 - 4001740 - G 100 -4.8 -5.80817 | overlap 4001742 CTCAAGAGAAAAAAA CAGG CAAGT CCTG CCGTAAGAATCACCG TERM 4488 4001754 - 4001742 - G 71 -5.5 -4.53737 | overlap 4001740 CAAGAGAAAAAAACA GGCAA GTC CTGCC GTAAGAATCACCGTT mnhG 4002552 - 4002220 - | MnhG TERM 4489 4002482 - 4002470 - G 70 -4.8 -4.7254 | AGTCGTGAGTAAAAA TCCG GCAGT CGGA TAATGCCAATGGAAC mnhF 4002833 - 4002549 - | MnhF mnhE 4003333 - 4002833 - | MnhE HRM2_35420 4005438 - 4003462 - | peptidase (U32 family protein) TERM 4490 4004208 - 4004223 + g 74 -7.5 -4.13767 | CGACCCCCACTCCCA CCGCC CTCTTT GGCGG TTTTACACTCAGAGG TERM 4491 4004811 - 4004800 - G 88 -3.6 -5.60864 | CACACAGGAAAAAAA CCGC TGGC GCAG GCCCTTCTGGGTGTA HRM2_35430 4005784 - 4005473 - | hypothetical protein TERM 4492 4005633 - 4005667 + g 83 -5.6 -5.1286 | TGGTAAACCCGGCGA CGATCCTCACCTGTTC TTC GATCAAGGGAAGATCG TTTTTGTCGTTTTTC deaD 4007703 - 4005853 - | DeaD TERM 4493 4007663 - 4007645 - G 70 -8.8 -3.53811 | opp_overlap 4007644 4007645, overlap 4007630 CCCATTTCGCTGAAA CCGGATTC GCT GAAACCGG GTTCATTGCAATCGG TERM 4494 4007746 - 4007732 - H 72 -7.8 -3.87576 | overlap 4007730 4007733 TTAAAAATATAAATA GCCGAC GGA ATCGGC CGGAAGTTGTTGAAT TERM 4495 4008123 - 4008098 - g 74 -8.3 -4.07568 | gap 1 CCGGGGCCGGTAAAA CCTGGATCGCAG AAA CTGC-AGCCAGG CAATACCTTGAAAGG HRM2_35450 4007842 - 4010070 + | RNA helicase of the superfamily II TERM 4496 4010077 - 4010096 + F 74 -9.4 -3.34398 | opp_overlap 4010075, overlap 4010076 4010080 CATCCTTGAAAACTG GAAGATGA TCGT TCATCTTC TCTTTAAGACACGAC TERM 4497 4010297 - 4010284 - f 71 -2.3 -5.11613 | ATACCATGCAAAAAA GCATG GTTA CAAGC CCATATCCCTACAGG TERM 4498 4011757 - 4011747 - g 70 -2.4 -4.93898 | overlap 4011749 AGACCAGCAGAAAAA GGTC GGC GTCC TGTCCGGCGGCGAGC TERM 4499 4011804 - 4011823 + G 71 -7.8 -4.07568 | opp_overlap 4011804 4011808 4011810 TGCCCTGATACTCAA GGAAGAGG CCAA CCTCATCC TTTTGGACGAGCCGA HRM2_35460 4010410 - 4012092 + | ABC transport system, ATP-binding protein TERM 4500 4012150 - 4012166 + F 86 -12.3 -2.52676 | ACTCACCACCCGGGG GCCCATC AAG GATGGGC TCCCTTACCGCCATC rhaT 4012161 - 4013012 + | RhaT TERM 4501 4013308 - 4013292 - g 78 -10.1 -3.82097 | GTCAAATCGAGGAAA GTGGCGA AGG CCGCCAC CAGCGATTTTCTCTC prfC 4013109 - 4014731 + | PrfC TERM 4502 4015384 - 4015364 - g 76 -5.3 -4.82901 | CGGCGCCCAGAAAAA CATCGGCCC GTC GGGCGTATG CATGGTCATTCTCAA serC 4014771 - 4015856 + | SerC TERM 4503 4016068 - 4016081 + G 70 -9.5 -3.25223 | CAAGGTCGTGGGAAG GGCCG GCAT CGGCC TTGATAATGTGGATA TERM 4504 4016877 - 4016859 - g 76 -4.5 -5.00616 | TTCTTGCCGAAAAAA TGGGGCT CATGC AGTCCCA GCTGGTCAAGGGACC serA1 4015859 - 4017439 + | SerA1 TERM 4505 4020201 - 4020183 - g 90 -6 -5.33405 | TCCAGGAAATAAAAA CTCTTCAG ATG CTCAAGAG CCCCATACCCAGGGC HRM2_35510 4017446 - 4021048 + | FAD-binding oxidoreductase (iron-sulfur cluster-binding domain protein) HRM2_35520 4021048 - 4021758 + | hypothetical protein HRM2_35530 4021845 - 4023068 + | hypothetical protein HRM2_35540 4023361 - 4023086 - | hypothetical protein HRM2_35550 4023721 - 4023383 - | hypothetical protein HRM2_35560 4024242 - 4023766 - | hypothetical protein TERM 4506 4024081 - 4024067 - G 74 -7.2 -4.13282 | ATGACATCGGGAAAA GAACAA ATT TTGTTC AATATCAAGTCCCCG HRM2_35570 4025927 - 4024338 - | hypothetical protein TERM 4507 4024862 - 4024890 + g 74 -11.7 -2.86271 | overlap 4024856 4024853 GCTCCCGTGCCCCCC GGTGGGGGATAAA TTG TTTAACCCCCTCC TCCTTCTCCTGGCCG mglA 4026543 - 4025938 - | MglA mglB 4027008 - 4026613 - | MglB HRM2_35600 4027187 - 4027360 + | hypothetical protein TERM 4508 4027926 - 4027916 - gT 91 -6.8 -5.14563 | CTCTCCATGAAAAAA CTGC AAC GCAG GGAATCCAAAATCCA HRM2_35620 4028479 - 4028267 - | hypothetical protein HRM2_35610 4027385 - 4028395 + | permease of the drug/metabolite transporter (DMT) superfamily HRM2_35630 4028690 - 4028472 - | hypothetical protein usp2 4028671 - 4029093 + | Usp2 TERM 4509 4029146 - 4029116 - TR 100 -13.3 -5.252 | opp_overlap 4029116 4029115 CAGGTGGACAAAAAA GGGGCACCAGAAG AAACG CTCCCGATGCCCC GTTGTAATTGAACTT etfA2 4030149 - 4029181 - | EtfA2 etfB2 4030940 - 4030152 - | EtfB2 TERM 4510 4031052 - 4031064 + r 74 -10.5 -2.66634 | opp_overlap 4031039, overlap 4031049 AACAGAGACCCCACT CCGGC CAT GCCGG TGATATCATCCCATA hdrF3 4033151 - 4031085 - | HdrF3 HRM2_35680 4033878 - 4033285 - | HTH-type transcriptional regulator (TetR family protein) TERM 4511 4033467 - 4033431 - G 70 -3 -4.8543 | gap 1, opp_overlap 4033437, overlap 4033419 4033436 CAAGCCCCATAAAAA GATCATGGCGCAAAACG CCTT CGTTCTG-ACCCTGCTC AATGATCTCGGTGAG TERM 4512 4033605 - 4033588 - G 74 -9.9 -3.53811 | opp_overlap 4033582 GCGATCCTGCTGAAA CTCTGTC AGAT GACAGAG GATCAAATTCCTGAG TERM 4513 4034616 - 4034600 - g 76 -4.3 -5.00616 | opp_overlap 4034602, overlap 4034602 TTTCGGCCTAAAAAA GCCCCAG GAT CTGGATC TTGCAAAAACAGAAA HRM2_35690 4034220 - 4035512 + | putative ketose-bisphosphate aldolase family protein TERM 4514 4035858 - 4035844 - g 73 -2.8 -5.04249 | TGGGCAAAAAATAAA TTTCAC CCA GAGAAA AGAAGAAAATTTCTC TERM 4515 4035874 - 4035860 - g 71 -5 -4.55287 | opp_overlap 4035860 TTCACCCAGAGAAAA GAAGAA AAT TTCTCC TTTACAACCATTGAT HRM2_35700 4035575 - 4036021 + | hypothetical protein flgM 4036029 - 4036328 + | FlgM HRM2_35720 4036524 - 4036985 + | putative methyl-accepting chemotaxis protein hisF1 4037775 - 4036996 - | HisF1 TERM 4516 4037583 - 4037549 - G 73 -5.1 -4.67353 | opp_overlap 4037560, overlap 4037551 4037553 CCACCCACGGAAAAA GGGATAAAAATGGTT TCAGC AACCTTTTTTACCAC GTCAATCATAATACC TERM 4517 4037560 - 4037572 + g 73 -3.4 -5.02074 | opp_overlap 4037553 4037551 4037549 AAAAGGGATAAAAAT GGTT TCAGC AACC TTTTTTACCACGTCA hisH1 4038398 - 4037769 - | HisH1 HRM2_35750 4039203 - 4038382 - | tetrapyrrole methylase family protein (MazG family protein) TERM 4518 4039137 - 4039171 + gr 82 -7.3 -4.63527 | gap 1, opp_overlap 4039158 CCTGATCCCCCCTGA GGGTCTGGATG-ATTT CGAT AAGTCCGTTCAGACCC TTTTTGACGTGGTCA TERM 4519 4039176 - 4039186 + gr 79 -5.4 -4.98672 | CGTTCAGACCCTTTT TGAC GTG GTCA TTTTCTGTTTTTCCC HRM2_35760 4039712 - 4039164 - | putative colicin V production protein-like protein TERM 4520 4040654 - 4040632 - g 70 -2.6 -5.00616 | overlap 4040633 TCCCCGGGGAAAAAA GTCTGGCCTC GTT GAGGCAAAAA ATATTCTTCAAGGCA phoH1 4039823 - 4040788 + | PhoH1 HRM2_35780 4040785 - 4043154 + | putative membrane assocoiated hydrolase of HD superfamily HRM2_35790 4043048 - 4043515 + | hypothetical protein TERM 4521 4043587 - 4043575 - g 70 -10.5 -2.9356 | AGCCACACTGAGACA GGCCC GGG GGGCC GCATACCCGGAACCC pdxJ 4043528 - 4044247 + | PdxJ TERM 4522 4044682 - 4044661 - g 71 -5.3 -4.5028 | gap 1 AGGACAACAAAAGAA TCAATCATTC CCT GAA-GATTGA TGATGCCGTCACCGA TERM 4523 4045052 - 4045038 - g 70 -2.8 -4.80178 | GATGAACCAACAAAA GAATTG CCA CGATTC AGGGGAATTTAAATT truC 4044282 - 4045064 + | TruC HRM2_35820 4045263 - 4045613 + | hypothetical protein TERM 4524 4045661 - 4045645 - T 70 -7.9 -3.59979 | CCTTTCCACGGGAAA CCCGGCA TTT CGCCAGG CCTTATTTCCACCGG HRM2_35830 4047006 - 4045624 - | putative metallo-beta-lactamase superfamily protein TERM 4525 4046206 - 4046170 - G 70 -9.3 -3.53012 | opp_overlap 4046202, overlap 4046174 GTGTGCCCCGCCAAA GGCAGCCGTGTCCCTTG TGT CAAGCACCACGGCCCCC TGCTCCATGTGGTTT TERM 4526 4046202 - 4046218 + g 74 -2.1 -5.08824 | opp_overlap 4046170 TGTCAAGCACCACGG CCCCCTG CTC CATGTGG TTTTTTACCTGGAGG HRM2_35840 4047345 - 4047833 + | hypothetical protein TERM 4527 4048129 - 4048110 - g 100 -4.2 -5.75342 | overlap 4048113 CCCCTCCAAAAAAAA TAACAGGG GATG CCCTGGCA AACTTAACCCTCCTG TERM 4528 4048126 - 4048113 - g 90 -8.1 -4.96028 | overlap 4048110 CTCCAAAAAAAATAA CAGGG GATG CCCTG GCAAACTTAACCCTC TERM 4529 4048768 - 4048750 - g 71 -5.2 -4.46112 | opp_overlap 4048750 CGTCATGGAAATAAA GGTGACGG AAC CCATGACC TTTCCCCTGGAAGAG HRM2_35850 4047845 - 4049416 + | hypothetical protein HRM2_35860 4049407 - 4049871 + | hypothetical protein TERM 4530 4050204 - 4050180 - g 71 -6.3 -4.3208 | overlap 4050182 GGCTACAAGTCAAAA TCCCTGCTTGG CTT CCAGGCCGGAA TAAAGACAGACAAAA TERM 4531 4050492 - 4050479 - g 74 -3.9 -4.96501 | GGCCAGAAAAATAAA CATAA TCAG TTATG AAGAGATGCTTGAAA lysC 4049901 - 4051127 + | LysC pyrF 4051852 - 4051118 - | PyrF TERM 4532 4051260 - 4051224 - G 74 -8 -4.02108 | gap 2, opp_overlap 4051224 4051226 CCCACCACAATGAAA TC-CGCCCCCTGCC-CGA TGG CCATGGCAGGGGTCGTGA TTCGTTCCTGGTCAT TERM 4533 4052024 - 4052009 - g 100 -4 -5.93809 | gap 1, opp_overlap 4052019 CGGGTAGAAAAAAAA GGA-CAG ATA CTGCTCC AGGCATTCCTTGGTA TERM 4534 4052679 - 4052667 - g 74 -7.7 -4.22927 | GGATTAAGATAGAAA GCATC CAG GATGC CGTACTTCTGCTCGG TERM 4535 4053007 - 4052995 - g 73 -5.5 -4.63932 | TATTCTTGAACAAAA GATCC TTG GGACC ACCCACTGCATAACC cheD3 4051952 - 4053328 + | CheD3 TERM 4536 4054393 - 4054379 - g 73 -2.8 -5.00616 | overlap 4054381 TGGCCGTTGAAAAAA TCCCCA CAC TGAGAA TGCTTGCCCTGAGCT selA 4053325 - 4054737 + | SelA TERM 4537 4054840 - 4054826 - g 91 -5.6 -5.48303 | AGAACCCGAAAAAAA GGCGGA TTT TCAGCC AAACGAGTATCTGTC TERM 4538 4055356 - 4055340 - g 80 -3 -5.32882 | gap 1, overlap 4055341 GAGGAGTACAAAAAA GGGCTTG ACGT CAA-CCC GGATAACACCAACCT HRM2_35910 4054734 - 4056020 + | TPR repeat domain family protein gmhA 4056045 - 4056614 + | GmhA HRM2_35930 4056607 - 4057557 + | hypothetical protein HRM2_35940 4057538 - 4057645 + | hypothetical protein TERM 4539 4057932 - 4057921 - g 86 -3 -5.53991 | GACCCATGAAAAAAA CAAT CAAA ATTG GAACCCGTGGAAGCA TERM 4540 4058396 - 4058382 - g 79 -5.6 -5.06103 | ACAAGGCTTAAAAAA CTTGCC GCA GGCGAG TTCGACGCCACCCTG hemC 4057857 - 4058834 + | HemC hemD 4058834 - 4060375 + | HemD moaA2 4060372 - 4061346 + | MoaA2 HRM2_35980 4061367 - 4062395 + | putative reponse regulator (CheY and GGDEF domain family protein) TERM 4541 4062378 - 4062414 + T 83 -8.7 -4.15832 | opp_overlap 4062380, overlap 4062380 ACCAAAAAAAACAAA AAGACCCTGTCAGGCTG ATT TAACCTGAAAGGGTCTC TTGTTTGTCGTTCGT TERM 4542 4062380 - 4062412 + T 90 -11.3 -3.66489 | opp_overlap 4062380, overlap 4062378 CAAAAAAAACAAAAA GACCCTGTCAGGCTG ATT TAACCTGAAAGGGTC TCTTGTTTGTCGTTC TERM 4543 4062412 - 4062380 - T 100 -12.8 -5.94743 | opp_overlap 4062380 4062378 CAAAAAAAACAAAAA GACCCTGTCAGGCT GATTT AACCTGAAAGGGTC TCTTGTTTGTCGTTC rplQ 4062814 - 4062452 - | RplQ TERM 4544 4062740 - 4062761 + g 71 -7.3 -4.09108 | opp_overlap 4062739 4062735 4062740 4062742 TTTAAATAAAGAAGT GACCATGTT TCTA AACATGGCC TTTCTGTGGCTTGAC rpoA 4063845 - 4062823 - | RpoA TERM 4545 4063771 - 4063789 + g 86 -11 -4.10161 | TTTTCCGTATGTGGA GGTTGTGG TAA CCGCAACC TTTTCAGGCATGATA rpsD 4064516 - 4063890 - | RpsD rpsK 4064990 - 4064595 - | RpsK rpsM 4065409 - 4065041 - | RpsM rpmJ 4065534 - 4065421 - | RpmJ infA 4065801 - 4065583 - | InfA secY 4067170 - 4065857 - | SecY rplO 4067628 - 4067191 - | RplO rpmD 4067811 - 4067629 - | RpmD rpsE 4068319 - 4067825 - | RpsE rplR 4068703 - 4068335 - | RplR rplF 4069267 - 4068725 - | RplF rpsH 4069677 - 4069282 - | RpsH rpsN 4069977 - 4069744 - | RpsN rplE 4070555 - 4070016 - | RplE rplX 4070903 - 4070574 - | RplX rplN 4071295 - 4070927 - | RplN rpsQ 4071571 - 4071314 - | RpsQ rpmC 4071788 - 4071591 - | RpmC rplP 4072200 - 4071793 - | RplP TERM 4546 4071955 - 4071969 + g 76 -2.8 -5.14563 | TTTACCCTTACCCAT CCTG ACTTCAG CAGG TTTTTTGGTAACCGG TERM 4547 4072010 - 4072000 - G 70 -2.4 -5.00616 | opp_overlap 4072000 4072007 TTTGTCCGGAAAAAA CCGG ATC CAGG TCTTTCCTGTTCTCT rpsC 4072872 - 4072225 - | RpsC TERM 4548 4072810 - 4072823 + g 76 -8.1 -4.15543 | TTTATCTGCGTACCA CCTGG AATC CCAGG TTTTAACGATGTTTA rplV 4073226 - 4072891 - | RplV rpsS 4073537 - 4073259 - | RpsS TERM 4549 4073439 - 4073451 + g 76 -4.8 -4.95876 | GGATCTCCTTGACCA GGTC TTGAT GACC TTTTTGCTTCTCGTT rplB 4074381 - 4073551 - | RplB rplW 4074681 - 4074394 - | RplW rplD 4075301 - 4074678 - | RplD rplC 4076125 - 4075502 - | RplC rpsJ 4076455 - 4076147 - | RpsJ tufA 4077431 - 4076475 - | TufA TERM 4550 4077018 - 4077008 - G 71 -5.4 -4.45083 | overlap 4077010 CTGAGATCGAGAAAA CATC CTC GATG GGCATGAGGAAATCC rpsG 4078187 - 4077720 - | RpsG rpsL 4078624 - 4078253 - | RpsL rpoC 4082898 - 4078741 - | RpoC TERM 4551 4080745 - 4080760 + g 74 -4.6 -4.77157 | AGGCCCCTGATAGCT CTTGGC ACTT GCCGGG TTTTTCATCACTTCC TERM 4552 4082079 - 4082048 - G 70 -9.4 -3.60792 | TGGTGAAGCCGCAAA TCAGGCCCCACCGT AATA ACCGTACGGCCTGA ATAATCAACCCGCTT rpoB 4087345 - 4083140 - | RpoB TERM 4553 4084973 - 4084987 + g 79 -7.1 -4.63932 | AGTTGAGGGACCATC GGCGA TGACC TCGCC TTTTCTTACGGCGTC TERM 4554 4087414 - 4087382 - R 100 -19.1 -3.62859 | ATTATAACCGTGAAA GCGGAGACATGGCCG TAT CGGCCGTGCCCCCGC GTCGAGTGTAAATAA rplL 4087849 - 4087466 - | RplL rplJ 4088548 - 4087925 - | RplJ rplA 4089335 - 4088643 - | RplA TERM 4555 4089061 - 4089077 + g 74 -4.4 -4.855 | gap 1, overlap 4089064 TCGGCTATAAAGTCG GCGCCTG CATC CAGG-GC TTCTTTTTCTTTTTC rplK 4089783 - 4089361 - | RplK nusG 4090352 - 4089822 - | NusG TERM 4556 4089975 - 4090004 + g 70 -2.8 -4.87389 | overlap 4089976 CACCCGTACATCATC ACCCGGTTCAAA ATAATA TTTGGGCTGGGG TTTATTTTTACCCTG secE 4090708 - 4090367 - | SecE rpmG 4091067 - 4090912 - | RpmG tuf 4092279 - 4091086 - | Tuf TERM 4557 4093743 - 4093729 - g 73 -3.4 -5.0538 | overlap 4093730 4093731 TCTGAGTTCAAAAAA GCCGGG ATC CCCGAA GAGCTCTCATGGCTG mltD2 4093114 - 4094895 + | MltD2 TERM 4558 4094986 - 4095010 + F 100 -9.3 -6.06723 | opp_overlap 4094986 4095007 CACCAGTAAATACGA GGCTTTCAGAT TTT AACTGAAGGCC TTTTTTTTTGGCCGG TERM 4559 4095132 - 4095114 - g 70 -2.3 -5.02476 | ACATCCCCTAAAAAA CCAGAAC TTCTT GCCCCGG CCGGGAACCTTGAAA HRM2_36490 4095093 - 4096340 + | peptidase (U32 family protein) TERM 4560 4096899 - 4096916 + G 74 -4.1 -5.03145 | overlap 4096900 TCATGGTGGACATCC ATCTTCC GGAT GGAAGAA TTTTTTCCCAAGTTG TERM 4561 4098780 - 4098758 - g 70 -9 -3.53761 | overlap 4098769 GAACGGGTTGCCAAA GCGGCAAGGG AGG CCCGTGCAGC CCAGAACATGGCCCA cheA2 4096427 - 4099618 + | CheA2 cheW2 4099671 - 4100120 + | CheW2 cheB2 4100121 - 4101221 + | CheB2 cheR2 4101235 - 4102071 + | CheR2 TERM 4562 4102431 - 4102407 - g 84 -2.1 -5.67967 | ACGAGCATAAAAAAA GCCGCCT TTTCTTTGTCC AGGCAGC AGGGGATCTGATGCT TERM 4563 4103114 - 4103104 - g 76 -5.4 -4.85599 | opp_overlap 4103104 GGCAGTTGACAAAAA CCTT TCC AAGG TGCTTGTGGCAGGTC TERM 4564 4103224 - 4103236 + G 75 -9.1 -3.89614 | ATTTAACTTTCTCCT GGACG AAG CGTCC TTTGTCCGGCTTGCC TERM 4565 4103335 - 4103323 - g 76 -3.3 -5.14563 | TTTGCGATCAAAAAA CAGGG AAG CCCTT GCCGCTGACATGGAG HRM2_36540 4102097 - 4103785 + | putative signal transduction protein HRM2_36550 4104849 - 4103782 - | hypothetical protein pgk 4106042 - 4104867 - | Pgk TERM 4566 4105094 - 4105080 - G 70 -9.2 -3.59979 | GGGCTTCATCTCAAA GACCCC CAT GGGGCC GTTCCAGACAATTGT TERM 4567 4105159 - 4105139 - G 71 -5.3 -4.56597 | TGGCCCGGGCAAAAA TCGCTCCTG TTT CAGGTCCGA TGTCAAGGGCCATCC TERM 4568 4105549 - 4105539 - G 74 -4.6 -4.8622 | TTTTTCAAGCAAAAA CCCG GCA CAGG CTTCACGAACAAACC HRM2_36570 4106276 - 4106079 - | hypothetical protein radC3 4107168 - 4106329 - | RadC3 TERM 4569 4106546 - 4106535 - GR 76 -7.2 -4.40561 | opp_overlap 4106535 4106542 4106543, overlap 4106537 TGTGGGCAAAAATAA GGGC CGCA GCCC TGTGCTCCAGGGCCT TERM 4570 4106543 - 4106559 + gr 70 -9.4 -2.76162 | opp_overlap 4106535 4106537, overlap 4106535 4106542 AAAATAAGGGCCGCA GCCCTG TGCTC CAGGGC CTTTGCAATGACCTC gyrA 4109692 - 4107080 - | GyrA TERM 4571 4107498 - 4107545 + gr 74 -9.3 -3.35996 | gap 3 ACACCCTTGCCGCCC CGGGTCTGG-GAGCGGTACTCCTG GAT CAGG-GT-CCGCTTACCATATCCG TTCTCGGTAACGGTG TERM 4572 4109281 - 4109306 + gr 70 -7.5 -3.75024 | opp_overlap 4109283 CGGTCTCTTTTTCAA GATCGGCCAGC ATCT GGTGGGCGATC TTCTTCATCCTGACC HRM2_36600 4110846 - 4109686 - | putative permease TERM 4573 4109871 - 4109857 - G 91 -5.6 -5.48825 | opp_overlap 4109859, overlap 4109860 GATGATTGAAAAAAA CACCAC CAG GGGGTG CATCTTTACCCTGTC TERM 4574 4110607 - 4110589 - G 100 -8.9 -5.39755 | CAGAACTACAAAAAA GATCACC AGGCA GGTGATC ATGGAAGCCAGACCT TERM 4575 4110788 - 4110771 - G 100 -2.6 -6.28401 | opp_overlap 4110774 GAAAAAAGAAAAAAA CCGCCT TTTCCG AGGTGG TCTGCCCTCTGGGAC atoB3 4112537 - 4111260 - | AtoB3 TERM 4576 4111692 - 4111724 + g 100 -14.1 -5.00616 | opp_overlap 4111672, overlap 4111694 CGCACCATCATTGAT GCCGGAAGCGTTGCC TGC GGTAACGCTGCCGTC TTTTTTAAAGGCGGG TERM 4577 4111694 - 4111722 + g 100 -15.3 -4.13561 | opp_overlap 4111672, overlap 4111692 CACCATCATTGATGC CGGAAGCGTTGCC TGC GGTAACGCTGCCG TCTTTTTTAAAGGCG TERM 4578 4112862 - 4112848 - g 80 -4.9 -5.14563 | GGGGTCACGAAAAAA GGCCG GTTTG CAGCC ATCACAAATTTTAGA TERM 4579 4112898 - 4112881 - g 71 -5.5 -4.45577 | overlap 4112884 ACAAATTTTAGAAAA CCATCGC TGCA GCGACAG GATGCCCCGTCAAGG HRM2_36620 4112668 - 4113444 + | hypothetical protein TERM 4580 4114147 - 4114135 - T 86 -10.5 -3.86524 | overlap 4114136 AGAGTTTCTTATAAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 4581 4114173 - 4114136 - T 73 -9.7 -2.91593 | overlap 4114135 GAGTTTCTTATAAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATTTTGAAACACCT HRM2_36630 4115605 - 4114250 - | putative ATPase TERM 4582 4114490 - 4114502 + g 100 -4.8 -5.75945 | overlap 4114477 4114479 AACCGGCAGGGAACC GGTC TCTTC GACC TTTTTTTTCACCCGT TERM 4583 4115141 - 4115116 - G 79 -13.9 -2.75957 | overlap 4115107 GATTAAGGGTAATCA CCCGGCACCGG GAGA CCAGGGCCGGG ATCACCTCAAACGAG engA2 4117089 - 4115611 - | EngA2 TERM 4584 4115708 - 4115747 + g 77 -9.4 -4.07568 | overlap 4115709 TTCTCAACAATTCTT TCGGCAAGCTTGCTTTTT CCCG AAAAATCGATCTTGCCGG TTTTGGCCCGGAACA TERM 4585 4115709 - 4115746 + g 71 -10.7 -3.04398 | overlap 4115708 TCTCAACAATTCTTT CGGCAAGCTTGCTTTTT CCCG AAAAATCGATCTTGCCG GTTTTGGCCCGGAAC TERM 4586 4116943 - 4116914 - G 74 -4.2 -4.84311 | gap 1, opp_overlap 4116914, overlap 4116915 TCGGACAGAAGAAAA CCGCCCGTGT-CC ACCAG GGTAAACGGGCGC TCGTTCCACACGGCA TERM 4587 4117357 - 4117343 - R 88 -10 -4.07687 | opp_overlap 4117332, overlap 4117351 ACTCTCTGCTTAAAA GGCAGA TAC TCTGCC GACTGAGTTAACGGC trkH 4118887 - 4117439 - | TrkH TERM 4588 4118086 - 4118070 - G 95 -5.1 -5.63504 | AACCCGAGAAAAAAA CGGCATT CGG AATCCCG CCAGAAGATAAGGGT TERM 4589 4118523 - 4118509 - G 74 -4.2 -4.77165 | TTCGCCAGAACAAAA GGCTCC TGG AAAGCC CCTCGATGTTGGTCA trkA4 4120255 - 4118888 - | TrkA4 TERM 4590 4118917 - 4118927 + g 71 -5.4 -4.57569 | opp_overlap 4118917 GCTTGACGGTAAGGA GCTT CTC AAGC TTTTTAACGGCCTGG TERM 4591 4119408 - 4119423 + g 74 -4.6 -4.79657 | overlap 4119413 TGATCCGACCCGTCC CCGTGG AGCA CAACGG TTTTGTTCATCTTCT TERM 4592 4119645 - 4119634 - G 72 -3.6 -4.7878 | CACTGATAAAATAAA CCAG ATCC CCGG GTCGAAGTACATTAT motA3 4121252 - 4120356 - | MotA3 TERM 4593 4120776 - 4120758 - G 79 -11.6 -3.62096 | opp_overlap 4120757 TCCCACCAGTCCAAA GGCCGGGG CCA CCTCGGCC ATGGTCTGGAGCACC motB3 4122063 - 4121245 - | MotB3 TERM 4594 4121279 - 4121297 + g 73 -6 -4.56702 | TCAGAATTAAATTGC GACCCT TCTGAAT AGGGTC TTTCTTTCATTAAAA TERM 4595 4121636 - 4121626 - G 76 -3.2 -5.21709 | overlap 4121628 4121630 GCCCAGATCAAAAAA CAGA TCC CCTG CAAGGGAAATCCTGA TERM 4596 4121970 - 4121960 - G 71 -5.4 -4.57837 | AGATTTTCTGAAAAA GGAT CGA ATCC CTGGCCAGACACCCC HRM2_36700 4122375 - 4122566 + | hypothetical protein TERM 4597 4123437 - 4123453 + G 74 -12.3 -2.81535 | opp_overlap 4123418 4123413 GACCCGATTCTGGAT CACCCTG CAG CAGGGTG TGGATTTTGTAATAA HRM2_36710 4122832 - 4123833 + | putative polysaccharide biosynthesis protein (NAD-dependent epimerase/dehydratase family protein) arnB 4123830 - 4124990 + | ArnB murG2 4124987 - 4126516 + | MurG2 neuB 4126521 - 4127570 + | NeuB HRM2_36750 4128112 - 4129344 + | hypothetical protein HRM2_36760 4129395 - 4130351 + | SAM-dependent methyltransferase family protein TERM 4598 4130459 - 4130449 - g 72 -4 -4.87807 | TCAAGAGATGAAAAA CAAT AAA ATTG ATTGGGGAAAAAGAG TERM 4599 4131091 - 4131081 - g 74 -2.6 -5.10461 | opp_overlap 4131081 GGGATTTAAGAAAAA TTTT AAA AAAA TCTATTGCTCATGGT HRM2_36770 4130348 - 4131358 + | putative ATPAse of LPS biosynthesis HRM2_36780 4131657 - 4133177 + | hypothetical protein TERM 4600 4133159 - 4133177 + F 78 -2.4 -5.44119 | opp_overlap 4133175 TGAATTAGCAAAGAG TTATGATG AAA CAGCATGA TTTTTTTGCCATAAA TERM 4601 4133247 - 4133237 - f 73 -2.6 -5.16237 | AAGGCGATTAAAAAA TATT TAG AATA TACGGGATTTAAAAG hisH2 4133376 - 4134005 + | HisH2 TERM 4602 4134129 - 4134107 - T 100 -14.9 -3.95022 | opp_overlap 4134107 TTCATCAATAGGAAA GCCGGAAGG GGTTT CCTTCCGGC TTTTATCATGTAGAC TERM 4603 4134107 - 4134129 + T 100 -15.6 -4.50976 | opp_overlap 4134107 TTCATCAATAGGAAA GCCGGAAGGG GTT TCCTTCCGGC TTTTATCATGTAGAC exeA4 4135046 - 4134204 - | ExeA4 TERM 4604 4135013 - 4135000 - G 87 -4.5 -5.47218 | TTCCATCCAAAAAAA TCGCC CATG GGCAA AGGTGTTGTGACGTC HRM2_36810 4136257 - 4135049 - | transposase/integrase family protein TERM 4605 4135212 - 4135195 - G 84 -11.3 -3.9398 | opp_overlap 4135192 4135191 4135195 CGATAACCTCATAAA TCCGCCT TTTA AGGCGGA TGGTATTGTTCAGGT TERM 4606 4135195 - 4135212 + g 71 -11.3 -2.85813 | opp_overlap 4135195, overlap 4135192 4135191 CGATAACCTCATAAA TCCGCCT TTTA AGGCGGA TGGTATTGTTCAGGT TERM 4607 4135685 - 4135665 - G 87 -4.7 -5.42259 | overlap 4135680 TCAGCGGTAAAAAAA CCGGCAT GAACGAT ATACCGG GTGGCATCATCTATG HRM2_36820 4136813 - 4136343 - | putative transposase TERM 4608 4136425 - 4136437 + gH 80 -2.7 -5.24129 | AGCGGATTCGTTCCC CAGTT CGT AATTG TTTTTTCTCGAACAA TERM 4609 4136906 - 4136873 - gH 80 -10.4 -3.47573 | TTATTTATACCACAA TCCCCCCCTCTT ATCCCCCCCA AAAAGGGGGGGA GGAGGATCACAAGGC HRM2_36830 4136776 - 4136982 + | hypothetical protein TERM 4610 4137640 - 4137624 - g 70 -8.1 -3.71907 | overlap 4137622 GAAAAATTACAAATA CCATTAA TTA TTAATGG TGGAATGGGAAAACC hisF2 4137069 - 4137794 + | HisF2 TERM 4611 4138291 - 4138275 - g 78 -2.3 -5.27938 | opp_overlap 4138275 4138283 ACTGTCAAAGAAAAA TATCATC CCG GATTATA TCTGTTGTATTTATG neuA 4137991 - 4138686 + | NeuA HRM2_36860 4138958 - 4139182 + | putative pyridoxal-phosphate-dependent aminotransferase TERM 4612 4139378 - 4139394 + T 78 -2.4 -5.44721 | ATGAGTAGACCCAAG TTATTT GTCCA AAATAA TTTTTTTAAACTGCT HRM2_36870 4142242 - 4139378 - | hypothetical protein TERM 4613 4139854 - 4139867 + g 70 -2.4 -5.03405 | TTCCAATCCAATTTT CAAG AAGTCC CTTG TTTTTCTGTAGTGTT TERM 4614 4140652 - 4140665 + g 80 -2.3 -5.44119 | opp_overlap 4140652 GCGTTGACAAACAAG TCGAG CTTT CCCGA TTTTTTTCAAATCCA TERM 4615 4142334 - 4142315 - H 100 -4.2 -6.48081 | TGGACAAAAAAAAAA GCAACCCC TATC GGGATTCC GCCCCTGGTAGACCC HRM2_36880 4142610 - 4144988 + | putative flagellin TERM 4616 4145047 - 4145085 + F 84 -9.7 -3.84719 | gap 1, overlap 4145053 AGGGCAACCTTTCAA TC-GGAATGCCCTGGAAA TTAT TCTCCAGGGCATTTCAGG TTTAAGTTTACAGGT TERM 4617 4145053 - 4145078 + F 93 -11.9 -3.72765 | overlap 4145047 ACCTTTCAATCGGAA TGCCCTGGAAA TTAT TCTCCAGGGCA TTTCAGGTTTAAGTT TERM 4618 4146062 - 4146051 - g 91 -3 -5.82316 | ACCATTGAAAAAAAA TTCA CCAT TGAA GCGAACGGGTCAGAC fliD 4145160 - 4146893 + | FliD TERM 4619 4147220 - 4147206 - g 74 -3.5 -4.99056 | overlap 4147207 GAATATAACTAAAAA CCCAG CGACC CTGGA TACGGCATTAAAATA fliS 4146907 - 4147332 + | FliS HRM2_36910 4147352 - 4147744 + | hypothetical protein flaG 4147775 - 4148176 + | FlaG HRM2_36930 4148611 - 4148183 - | hypothetical protein csrA 4148869 - 4148624 - | CsrA HRM2_36950 4150958 - 4148880 - | putative flagellin TERM 4620 4149209 - 4149189 - G 72 -8.3 -3.83205 | overlap 4149191 4149203 4149205 ATCCTTTAGATCAAA CAGGGTGTT AAA AACACCCCA CTCAGGTGCGTCATC TERM 4621 4149207 - 4149191 - G 77 -10.9 -3.5032 | overlap 4149189 4149203 4149205 CCTTTAGATCAAACA GGGTGTT AAA AACACCC CACTCAGGTGCGTCA TERM 4622 4149516 - 4149506 - G 71 -6.8 -4.20367 | opp_overlap 4149503 4149511 4149513 4149515 TTTCCGAATAAACAA CACC CGG GGTG AGGGTTATGGCCATG TERM 4623 4149585 - 4149575 - G 86 -5.4 -5.24129 | opp_overlap 4149575 TGTCCTCATAAAAAA CGAT CTC ATCG TTATCACCCGCAGTT HRM2_36960 4154778 - 4150972 - | putative flagellar hook-associated protein TERM 4624 4151448 - 4151437 - G 87 -4.4 -5.40474 | ATTTCCTGAAAAAAA GGTA TTGA TACC CGCGGCAGCCATCAC TERM 4625 4153093 - 4153109 + g 71 -6.5 -4.1899 | GGCACCGATCTCAAG CCCTTGG ACC CCAATGG TTTTGCCTGAACTGC TERM 4626 4154634 - 4154618 - G 80 -2.2 -5.4505 | GTGCCGAACAAAAAA CCGG AATAAGAGG CCGG GGTGTTGCTCTTTTG HRM2_36970 4155281 - 4154781 - | putative flagellar apparatus related protein TERM 4627 4155370 - 4155358 - R 72 -6.3 -4.38712 | opp_overlap 4155358 4155357 TTTATTGCTACAAAA GGAAA AAT TTTCC CTGTTATCTGAAAGG flgJ 4155827 - 4155522 - | FlgJ flgI 4157032 - 4155896 - | FlgI TERM 4628 4156063 - 4156083 + g 76 -11.9 -2.89 | overlap 4156060 CCTCCTCGTCCACGG CCACATCTC TTT GGGATGTGG TGATTGTCTCACCCT flgH 4157791 - 4157087 - | FlgH flgA 4158732 - 4157800 - | FlgA TERM 4629 4158654 - 4158667 + g 72 -9.5 -3.35465 | overlap 4158662 ACGCCCTGGCATTGA CCCCG GCCT CGGGG TTGATCTCTATCAAT flgG2 4159547 - 4158765 - | FlgG2 flgF 4160343 - 4159663 - | FlgF TERM 4630 4159838 - 4159821 - G 73 -10.5 -3.29511 | GGGAGCCCTGGACAA CGCCGAC ATTG GCCGGCG CAACTTCAAGGTTGG TERM 4631 4160574 - 4160593 + r 78 -4.2 -5.15167 | GCTGGCCGGAAAAAA CTGCCTAG GGTT TTGGGCGG TTTTTGTTGATGCTG flhB1 4160844 - 4160578 - | FlhB1 HRM2_37050 4161861 - 4160848 - | FliK TERM 4632 4161418 - 4161406 - G 74 -6.9 -4.34488 | opp_overlap 4161406 4161406 TACACGGAGAATAAA CCCAG GGT CCGGG GTTTCAGATTTAAGG HRM2_37060 4162406 - 4161858 - | hypothetical protein TERM 4633 4162253 - 4162272 + g 80 -2.1 -5.40474 | CATCTTTTGCACCTT TGTCCGT TTTTTC AAGGACA TTTTTTTCCCGGGAT HRM2_37070 4162699 - 4162403 - | hypothetical protein HRM2_37080 4164164 - 4162710 - | hypothetical protein TERM 4634 4163102 - 4163127 + g 87 -9.6 -4.36914 | opp_overlap 4163092 CATCAGCCACCTGTC GGGGCCCTGG AATCAC CCTGGGCTCC TTTTCTCCAAAAAAC fliA 4164881 - 4164165 - | FliA flhG 4165801 - 4164989 - | FlhG flhF 4167020 - 4165914 - | FlhF flhA 4169107 - 4167017 - | FlhA flhB2 4170260 - 4169187 - | FlhB2 TERM 4635 4170024 - 4170014 - G 73 -3.2 -4.99043 | TGGCCACAAACAAAA GATG CAC CACC GCCACATCATTAGAA fliR 4171051 - 4170263 - | FliR TERM 4636 4170664 - 4170610 - G 70 -9.4 -3.56558 | gap 2, overlap 4170641 CCACAAGGGAGAGAA GCATGATGTGGTGGCCGTTCATGGCC AAAAA GACCA-GAAGGGCCACC-CAGTATGC AAGCTGCTCCATAAG TERM 4637 4170889 - 4170867 - G 70 -9.9 -3.24924 | gap 1, overlap 4170865 GTTTCAGGCAGAAGA TCCG-GGTCC AACT GGACCACGGA GTAAAGCAGCATGGA fliQ 4171330 - 4171061 - | FliQ fliP 4172109 - 4171333 - | FliP fliO 4172464 - 4172099 - | FliO TERM 4638 4172291 - 4172326 + g 70 -2.4 -5.06103 | overlap 4172295 4172296 CACCAGTTTTTCCTT GGGTGCCAGGTGATGG GCCG CAATGACCTGGATCTC TTTTTTGCCCGTTCT fliN 4172805 - 4172464 - | FliN TERM 4639 4172825 - 4172845 + r 86 -2.5 -5.75342 | overlap 4172826 ATTCTCTCTTTGTTT ATGGTCCTA CTT TATGACCAG TTTTTTTTCCACCCG fliM 4173811 - 4172831 - | FliM fliL 4174319 - 4173819 - | FliL TERM 4640 4173858 - 4173848 - G 100 -5.4 -5.86061 | GGTTAGTAAAAAAAA GATC TCT GATC CCTGCCTTGGCCAGG TERM 4641 4173878 - 4173900 + g 82 -4 -5.35222 | overlap 4173862 4173880 4173881 4173884 CCTTGGCCAGGTTCT GCCCAGCCAG GCT CTGGTTGATC TTTTTTATCAATTTT TERM 4642 4174473 - 4174445 - R 100 -20.5 -3.72695 | opp_overlap 4174454 AGTTTTTTTATGAAA GGGGGAAGAGATT TAG AATCTCTTCCCCC AAAAGGATCATTACT flgE 4177189 - 4174484 - | FlgE TERM 4643 4175185 - 4175204 + g 76 -12.2 -2.90508 | opp_overlap 4175184 4175188, overlap 4175188 4175192 CATTGCCTGAACCAT CAAGGTCG ATGA CGACCTTG TCCTTGTCTCCCTTG flgD 4177896 - 4177279 - | FlgD TERM 4644 4178051 - 4178039 - R 74 -10.5 -2.60763 | opp_overlap 4178039, overlap 4178038 TCGATATTGTAGAAT CCGCC AAA GGCGG TTCCATCGGCCACCT TERM 4645 4178039 - 4178051 + r 76 -10.5 -3.05463 | opp_overlap 4178039 4178038 TCGATATTGTAGAAT CCGCC AAA GGCGG TTCCATCGGCCACCT TERM 4646 4178241 - 4178254 + r 79 -6.7 -4.62069 | overlap 4178237 ACCCTTCCATGGGAT TCAGG GGGT CCTGA TTTTTCAGCTGGGCC fliK 4180254 - 4178407 - | FliK HRM2_37240 4181002 - 4180382 - | hypothetical protein fliJ 4181447 - 4180989 - | FliJ fliI 4182799 - 4181444 - | FliI fliH 4183806 - 4182799 - | FliH TERM 4647 4183753 - 4183777 + g 71 -7.7 -3.96999 | overlap 4183759 AATGTCAAGGGCTTT CCACCGGTCCT GCC GGGTCGGGTGG TCTTTTTCAGTATCA TERM 4648 4183812 - 4183827 + r 73 -9 -3.41602 | opp_overlap 4183806 AGGACATCATCCTTA CCCTTG CCGC CAAGGG TTATGGTACCATCGG fliG 4184806 - 4183790 - | FliG TERM 4649 4184317 - 4184330 + g 85 -3.7 -5.52986 | GCTTTGCAACCCTCA GGGCG ATAT CCCCC TTTTTTTCATCCGGT fliF 4186521 - 4184806 - | FliF fliE 4186825 - 4186535 - | FliE flgC 4187499 - 4187002 - | FlgC flgB 4187909 - 4187499 - | FlgB HRM2_37330 4189358 - 4187991 - | putative nitrogen assimilation regulatory protein NtrC TERM 4650 4188569 - 4188579 + g 71 -6.8 -4.25104 | CTGTGCCGCCCACAC GGTC CAC GACC TTTTCCTGGAGAACC TERM 4651 4188961 - 4188986 + g 76 -6.1 -4.67552 | GGTTCCCCCCCCCGT TCAGGCCCTTT GCCC ATGGGGTCTGA TTCTTTTTTCCTGGA TERM 4652 4189142 - 4189127 - G 70 -10.4 -2.92495 | overlap 4189122 4189124 CCGACACAAAGAGCA GCTCCG TGTC CGGAGC CTTCAACTTTATTTT HRM2_37340 4191930 - 4189378 - | TPR repeat family protein TERM 4653 4190219 - 4190205 - G 73 -5.6 -4.72272 | overlap 4190207 TTTTTCCATCAAAAA GGGCCT CGT AGGCAC GCTGCATGAGCTTTA TERM 4654 4190964 - 4190948 - G 80 -2.1 -5.48303 | opp_overlap 4190948 ATAATGGCAAAAAAA CCTTCGG CAG CAGCAGG ATTTTTAAGACGGGT TERM 4655 4191725 - 4191707 - G 71 -7.4 -4.09739 | TCAACGTCTTTAAAA GCAATGAG CAC CTCTTTGC CATCGACCTTGATCA TERM 4656 4192135 - 4192147 + r 78 -10.5 -3.28712 | GAGCCATACCTCGCT CCGGC CGT GCCGG TTATAAAAAAGGCCC HRM2_37350 4193209 - 4192148 - | sigma-54 dependent two-component transcriptional regulator cheY 4193580 - 4193206 - | CheY cheX2 4194079 - 4193618 - | CheX2 HRM2_37380 4194428 - 4194147 - | hypothetical protein TERM 4657 4194640 - 4194610 - R 73 -2.6 -5.14965 | ACCGGCAGCAAAAAA CGGCAAAAAAATAA AAC TTATATTTTATCCG CTATGCCCAGAAAAA HRM2_37390 4196123 - 4194627 - | predicted two-component system transcriptional regulator TERM 4658 4195524 - 4195509 - G 70 -2.5 -5.0538 | CGCCATGGGAAAAAA CGAAC TGTCCT GCTCG GTGTAAGTATAAAAG HRM2_37400 4196502 - 4196978 + | HTH-type transcriptional regulator TERM 4659 4197141 - 4197121 - g 74 -9.7 -3.53343 | opp_overlap 4197123, overlap 4197123 AACTGCCTTTTCAAA GATTCCCGG ATT CCGGGAATA CTATGCCGTCAAGGC TERM 4660 4197123 - 4197139 + G 73 -12.3 -2.63596 | opp_overlap 4197121 4197123 CTGCCTTTTCAAAGA TTCCCGG ATT CCGGGAA TACTATGCCGTCAAG TERM 4661 4197139 - 4197123 - g 80 -12.3 -3.34398 | opp_overlap 4197123, overlap 4197121 CTGCCTTTTCAAAGA TTCCCGG ATT CCGGGAA TACTATGCCGTCAAG lysA4 4196981 - 4198234 + | LysA4 nadE 4198321 - 4199955 + | NadE TERM 4662 4200137 - 4200153 + T 75 -5.1 -4.75309 | ACTCGGTCGTTCCTC CCTCAAA CAA TTTGCGG TTTTATTGGGTTTGC HRM2_37430 4201123 - 4200401 - | putative enoyl-CoA hydratase/carnithine racemase HRM2_37440 4201302 - 4202135 + | hypothetical protein HRM2_37450 4203864 - 4202125 - | putative metal-dependent hydrolase of the beta-lactamase superfamily TERM 4663 4203809 - 4203823 + g 76 -8.5 -4.23988 | ATATCACTGCGGATT GCGGC CAGGT GCCGC TCTTTTTTGATCTGG ampG 4205143 - 4203848 - | AmpG TERM 4664 4203966 - 4203948 - GR 100 -5.2 -6.14618 | overlap 4203949 CATAAAACAAAAAAA CCCACCCA TCC CAGGTGGA TCGCAAAATACCCCG TERM 4665 4203965 - 4203949 - GR 72 -6.5 -4.25111 | overlap 4203948 ATAAAACAAAAAAAC CCACCCA TCC CAGGTGG ATCGCAAAATACCCC TERM 4666 4203987 - 4203977 - GR 73 -8.2 -3.6692 | overlap 4203975 GTGGATCGCAAAATA CCCC GTT GGGG CTGCTGCAAGGACCC TERM 4667 4204759 - 4204749 - GR 95 -2.4 -5.9003 | overlap 4204750 AAAGTAACAAAAAAA GCAG CCA CAGC CACAAGCCAGGGGGC TERM 4668 4205038 - 4205049 + gr 78 -5.8 -4.82901 | opp_overlap 4205008 AGAATCCCATGACCA TGGC CACG GCCA TTTTTCTGCCAAAAA TERM 4669 4205106 - 4205065 - GR 73 -5.8 -4.56597 | gap 3, opp_overlap 4205069 4205081, overlap 4205068 4205069 TTTTTCTGCCAAAAA CG-ATCCGGC-CCCCAGACGG TGC CC-CCGGGGGTGCCGGTTTCG ACACCGGCCTAGATG TERM 4670 4205101 - 4205069 - GR 70 -9.8 -2.53903 | opp_overlap 4205069 4205081, overlap 4205068 4205065 TCTGCCAAAAACGAT CCGGC-CCCCAGACGG TGC CC-CCGGGGGTGCCGG TTTCGACACCGGCCT HRM2_37470 4206797 - 4205115 - | putative Fe-S oxidoreductase family protein TERM 4671 4205563 - 4205551 - GR 80 -4.8 -5.06816 | AGGTTTGAATAAAAA CCCT TGCGC AGGG CGTGGCCAAAGGTCT TERM 4672 4206187 - 4206165 - GR 74 -7.6 -3.9941 | overlap 4206166 TTCCGGAGAATGAAA CCTTACCCGG GCG CCGGGCCAGA ATCGGGGAGACCCGC TERM 4673 4206503 - 4206486 - GR 70 -2.6 -4.9725 | overlap 4206487 ATGGTCACACAAAAA TGTGGC GCAGGG GCCACC AAAAACAACTAAAAT HRM2_37480 4207406 - 4206825 - | nitroreductase family protein ham 4208056 - 4207403 - | Ham HRM2_37500 4209414 - 4208242 - | hypothetical protein TERM 4674 4209198 - 4209213 + g 78 -4 -5.07053 | gap 1, overlap 4209198 4209200 TATGACACAGGAGCT G-ATCCC TCG GGGATAC TTTTTTACAATCATT HRM2_37510 4210028 - 4209414 - | hypothetical protein TERM 4675 4209656 - 4209674 + g 70 -3 -4.81752 | GGTCCACATATCCCC GGGACTGG TAG CGGGTCTC TTTTTGAATGTTTTT TERM 4676 4210030 - 4210040 + H 76 -6.8 -4.53349 | overlap 4210026 CAATTTTTTTTCATG GGAC CAT GTCC TTTATTTAATGATTA TERM 4677 4210349 - 4210330 - g 78 -2 -5.32699 | opp_overlap 4210334, overlap 4210331 4210334 GTAAAGATGAAAAAA TTTACGGC GATT GCCGTTAT AGCAGCAGTTCCATT ompF 4210321 - 4210962 + | OmpF HRM2_37530 4212643 - 4210979 - | pyridoxal-dependent decarboxylase family protein TERM 4678 4211648 - 4211635 - G 74 -8.1 -4.08692 | CAATCCCCTTTAAAA GCGGT GCAT ACCGC TCACTCAAAAGCACG TERM 4679 4212561 - 4212584 + g 72 -3.8 -4.84274 | gap 1, overlap 4212563 4212581 ATCCGTTCAAGGGTT TTCCAGTCCGC GAT GAGG-CTGGGA TTTTTCCTATCGTTG TERM 4680 4213061 - 4213045 - g 71 -7.2 -4.11751 | ATCAACTTTTTAAAA CCCGCC TTTGG AGCGGG GTTGGCGTGTGAATC TERM 4681 4213113 - 4213093 - g 71 -5.3 -4.4648 | ACCGTCATCAGAAAA GGCAGGCAG ATT CTGGTTGCC GAATCTGAGGTGTAC HRM2_37540 4212769 - 4213221 + | hypothetical protein porA1' 4214637 - 4214089 - | PorA1' porB1 4215443 - 4214634 - | PorB1 TERM 4682 4214735 - 4214717 - G 76 -5.2 -4.87665 | CTTCATCTACAAAAA TCCCCCTT GCA ATGAGGGA AGGATTCTCTGCCAG TERM 4683 4214874 - 4214891 + g 79 -5.5 -5.04385 | opp_overlap 4214874 CTCAACCACTGAAAA GCCCTTG TGAT CAATGGC TTTTTTCAGGATATC porC1 4216593 - 4215445 - | PorC1 fdx9 4216807 - 4216586 - | Fdx9 TERM 4684 4217698 - 4217686 - g 74 -2.6 -5.15634 | overlap 4217688 TATTCCAGGAAAAAA CCGC CATTT ACGG CCAGGGATGCATCAA HRM2_37590 4216935 - 4217783 + | glycosyl transferase family protein HRM2_37600 4220221 - 4217786 - | hypothetical protein TERM 4685 4217950 - 4217962 + g 71 -5.5 -4.56597 | overlap 4217947 4217944 CAACGATCACACGGG GCAGG GCC TCTGC TTTTTCCAAAAAAGC HRM2_37610 4220936 - 4220208 - | two-component response regulator containing a CheY-like receiver domain and an HD-GYP domain hrpA 4225118 - 4221117 - | HrpA TERM 4686 4224858 - 4224869 + g 76 -4.4 -5.03715 | GAACTTCAGGGCGTG GATG ATTT CATC TTTTTTCCCCGTGAT HRM2_37630 4225142 - 4225252 + | hypothetical protein TERM 4687 4226271 - 4226287 + G 71 -5.1 -4.46854 | overlap 4226272 4226285 CCTATGGAGACCCAA TCGCAGA AGA TTTGCGG TTTATTGTTAAATCG hdrD4 4225334 - 4226653 + | HdrD4 TERM 4688 4226645 - 4226658 + T 73 -3.9 -5.02476 | opp_overlap 4226645 TTCCACCCTGAGACA GAAAT GTAA ATTTC TTTTTTAACACGTCT TERM 4689 4226680 - 4226711 + T 100 -22.4 -5.60993 | opp_overlap 4226669 AACACGTCTTATTCA GCCCTGGACTGGAG ACTT CTCCGGTCCAGGGC TTTTTTTGTCCAGGG TERM 4690 4226762 - 4226749 - T 71 -2.4 -5.21683 | ATGTAAAAAAAGAAA GTTG GATGGG CAAC AGTTGATGACCGTTT HRM2_37650 4227338 - 4226958 - | hypothetical protein thrS2 4229304 - 4227394 - | ThrS2 TERM 4691 4227564 - 4227578 + g 80 -3.4 -5.26119 | overlap 4227565 GGGGCACATAGTTCA CCTGGG CCT CCCGGA TTTTCTTTTTCAGGC TERM 4692 4228615 - 4228638 + g 82 -3.8 -5.24129 | CTTTGCCTCCTCGAT GAGATGAAGG TAGG CCTTGAGCTC TTTTTTATCAAAAAA rnd 4229392 - 4230525 + | Rnd dapF 4230555 - 4231406 + | DapF HRM2_37690 4232172 - 4231396 - | putative ankyrin membrane protein TERM 4693 4232303 - 4232293 - H 71 -4.6 -4.72497 | GACCCATGAACAAAA GGAG AGA CCCC ATGCAGATCATCAGA TERM 4694 4232521 - 4232497 - g 76 -7.1 -4.5442 | overlap 4232498 4232513 GCCTGAACTACAAAA GCCATGCCG CCGAAAC CGGCATGGA ACTACCGCAGCACCC TERM 4695 4232520 - 4232498 - g 73 -10.6 -3.3217 | overlap 4232497 4232513 CCTGAACTACAAAAG CCATGCCG CCGAAAC CGGCATGG AACTACCGCAGCACC hpcE 4232304 - 4233110 + | HpcE HRM2_37710 4234276 - 4233116 - | hypothetical protein TERM 4696 4233406 - 4233428 + g 82 -7.7 -4.6902 | CCCCGGTCATGTAGC CCGATCGTG ACCGA CACGATGGG TTTTTGGCCTTGTAG TERM 4697 4233757 - 4233767 + g 80 -4.6 -5.14563 | CCGCAGCAAGGGCCG CCTC ATG GGGG TTTTTTGATGCGGCA HRM2_37720 4235597 - 4234362 - | permease of the major facilitator superfamily TERM 4698 4234549 - 4234533 - G 89 -2.2 -5.8096 | CATAAAAAAGAAAAA CAATCC ATAGG GGCTTG CTTCCATGACCATGG TERM 4699 4234592 - 4234574 - G 73 -11.6 -2.97667 | overlap 4234571 CCATGGACGAAACCA GGGGCCCC AGG GTGGCCCC CACCCCATAGGCAAA TERM 4700 4236602 - 4236589 - g 73 -3.1 -4.96468 | gap 1 GAAAGTGAAACAAAA CGC-TC CTG GATGCG CCAACGGGTTGAGTA TERM 4701 4236705 - 4236693 - g 80 -3.4 -5.24129 | TTCCCCCACAAAAAA CATC TCCAC GATG ACCCAGTGGAAGGGG TERM 4702 4236754 - 4236741 - g 70 -2.3 -4.98616 | TGAAAACATTAAAAA CGACC TTAA AGCCG TGGGCCCCTTAATGC HRM2_37730 4236094 - 4237206 + | putative methyl-accepting chemotaxis protein tlpB 4237203 - 4237961 + | TlpB TERM 4703 4237983 - 4237969 - g 86 -6.4 -5.19212 | opp_overlap 4237969 ATGATTAGGAAAAAA GATCAG ATA CTGACC TTTCCCTTTACCCAA spoU 4237954 - 4238829 + | SpoU TERM 4704 4239358 - 4239325 - g 80 -2.3 -5.49809 | overlap 4239327 CAAAGGTGAAAAAAA CGTGACCGGCACC TCGGACAT GACGCCGGTAAGG GAACAAATTGCCCTA HRM2_37760 4238933 - 4239919 + | ABC-type transporter, periplasmic substrate binding protein TERM 4705 4239971 - 4239983 + G 100 -6.9 -5.22039 | GATCTACTCGATCAT GGCCC TTG GGGTC TTTTTTACCTTTCGG HRM2_37770 4239927 - 4240817 + | ABC-type transporter, permease component HRM2_37780 4240814 - 4241608 + | ABC-type transporter, ATP-binding protein (ATPase) typA 4241631 - 4243436 + | TypA TERM 4706 4243617 - 4243630 + G 80 -9.5 -4.10657 | GCCTACCAGTTCCTT CCGGG AATG CCCGG TTTTACCGAGTCTGC HRM2_37800 4243455 - 4244519 + | hypothetical protein HRM2_37810 4244756 - 4244565 - | hypothetical protein TERM 4707 4244784 - 4244822 + r 80 -11.6 -2.60496 | opp_overlap 4244781, overlap 4244783 4244782 GCACAATTAGAATTG CTGGGACCTGGGGGATGA TGA TGGCTCCCCAGGTCCCCG GTATTTACACAAGGC usp3 4245795 - 4244827 - | Usp3 TERM 4708 4245295 - 4245277 - GR 86 -6.6 -5.04385 | overlap 4245280 CACACCGGCAAAAAA CAAGGGGA GAT CCCCCATG GATACCATTATCTTA TERM 4709 4245291 - 4245280 - GR 82 -7.2 -4.62085 | overlap 4245277 ACCGGCAAAAAACAA GGGG AGAT CCCC CATGGATACCATTAT sucC4 4248439 - 4245761 - | SucC4 TERM 4710 4246882 - 4246899 + gH 71 -8.4 -3.53012 | TTTGTCCGGCAAGTT CAGCGG CTTTAT CCGCTG TTTCGGCAAGCAGGC TERM 4711 4248536 - 4248550 + H 81 -11.4 -2.77899 | opp_overlap 4248535, overlap 4248532 AAGCAGATACCATAC TCCGGC CAT GCCGGA TAGTTAGTCACGGGG TERM 4712 4248813 - 4248798 - H 75 -9 -3.71649 | opp_overlap 4248799, overlap 4248799 TTTTGAAAGTTGAAA GGGGTA TTGA TACCCC ATGGATGCCCATACC TERM 4713 4249204 - 4249188 - g 82 -7.9 -4.59773 | GGTCAGCCTCAAAAA GGAGGTC AAA GGCCTCC AGGAACAGCTCATCC HRM2_37840 4248814 - 4250226 + | sigma-54 dependent DNA-binding response regulator TERM 4714 4251140 - 4251127 - g 70 -2.3 -4.99035 | overlap 4251128 4251129 TCATTGAGAGAAAAA GGGGA CGGA TCGCC CTTGAACGGAGCGAA HRM2_37850 4250223 - 4252241 + | two-component sensory box histidine kinase/response regulator TERM 4715 4252836 - 4252826 - g 70 -2.4 -5.00616 | GGGCCCTTGAAAAAA TGCC GGA GGCC CAAAAAATCCAGGCC TERM 4716 4252856 - 4252844 - g 73 -3.3 -5.03314 | opp_overlap 4252851, overlap 4252845 CGGAGGCCCAAAAAA TCCAG GCC CTGGT TCAGACAGGTCTTGA draG2 4252243 - 4253145 + | DraG2 TERM 4717 4253577 - 4253556 - g 74 -6.5 -4.3014 | opp_overlap 4253556, overlap 4253546 4253544 ATATATTCAGGAAAA CCTGACCAA GACA TCGGACAGG ATTTATCAGTTCTAC HRM2_37870 4253395 - 4253649 + | hypothetical protein HRM2_37880 4253653 - 4253862 + | hypothetical protein TERM 4718 4254069 - 4254084 + G 100 -6.8 -5.38839 | CATGGCCGGTTATGT GGGTGC AGAA GCATCC TTTTATTTTTATATG HRM2_37890 4253881 - 4254120 + | hypothetical protein TERM 4719 4254305 - 4254317 + F 91 -10.5 -4.18303 | AGCCGATACTTCGCT CCGGC CGT GCCGG TTTATAATTTATCAT TERM 4720 4255191 - 4255205 + GF 72 -9.2 -3.07994 | opp_overlap 4255177 4255175 4255163, overlap 4255193 ACCGTGGCACGGACA CGGGCC ATG GGCCTG TTCAGTGAACTTGCC TERM 4721 4255341 - 4255369 + GF 80 -11.7 -2.60075 | overlap 4255340 GAGGATATGGGTGCA TCTGTCTGGGCCC ACA GGGCCTATGCAGA CTTCCTTGAAACCGC TERM 4722 4255597 - 4255638 + G 86 -14.6 -3.30243 | gap 1 ACATCTTTATCCGCA TTGATCTGGCCCATGGGTG GCAGG CAGCCATGGGCCAGG-CAA TTATGGACAATGGAT HRM2_37900 4254429 - 4255718 + | hypothetical protein TERM 4723 4255869 - 4255850 - gf 74 -10.6 -2.59654 | opp_overlap 4255851, overlap 4255849 4255848 ACAACAACGAAAATG CCCTGGGG CCAC CCCCTGGG GTGGAACAGGTTGTA hisC3 4255525 - 4256841 + | HisC3 TERM 4724 4257552 - 4257575 + G 72 -9.6 -3.44051 | gap 1 AGGAGATCGGGGCCC TGG-GAGGGCC TGT GGCCCTTGCCA TTCTGATCATGCCCA TERM 4725 4258029 - 4258039 + G 70 -4.6 -4.74132 | overlap 4258032 TGTTGCTTTTGCGAC TGCC CCT GGCG TTTTTGCTCGGGTAT matE 4256831 - 4258192 + | MatE TERM 4726 4259115 - 4259134 + G 80 -4.2 -5.07107 | gap 1 TGCGTCAAACGCATC GGCA-TCCC CAT GGGCCTGCC TTTTTTACAAATTTC HRM2_37930 4258212 - 4259291 + | hypothetical protein TERM 4727 4259635 - 4259606 - g 70 -8.6 -3.73775 | CTCATGTTGATGAAA TCCTACCGCCAC ACCCGG GTGGCGGCAAAA ATTAACCAGTCTATC TERM 4728 4259958 - 4259982 + G 82 -8.5 -4.46212 | TGGCCGGTGAAGCCC TCGCCGGAACC ACC GATTCCGACGA TTTTCTGCTGCCCAA HRM2_37940 4259291 - 4260370 + | hypothetical protein TERM 4729 4261549 - 4261520 - g 79 -7.9 -4.57569 | gap 1 GGATTTTTGTAAAAA CCGACACCGTT-CC CCT GGCAAAGGTGTCAG GAGGAGAGGGAAACC srf 4260397 - 4261923 + | Srf TERM 4730 4263010 - 4262996 - g 90 -5.7 -5.27335 | overlap 4263006 TGGCGGAAACAAAAA GCACA AGGGA TGTGC CATATCGGCACAGGA HRM2_37960 4261926 - 4263065 + | hypothetical protein TERM 4731 4263290 - 4263254 - g 71 -5.2 -4.56961 | gap 2, overlap 4263263 AAGACTCACAGAAAA GGGCA-GAT-ACCGGGAT CAC ATCCTGGAGATCATGCCC CGGATAACAGGATAT TERM 4732 4263405 - 4263375 - g 83 -12.6 -3.61715 | opp_overlap 4263359, overlap 4263376 GAGGCGCTGGAAGAA CGGCTCTCCTGCCT TGG AGACAGAAGAGCCC TGGACGGCTGGACCA TERM 4733 4263404 - 4263376 - g 88 -16.1 -2.76815 | opp_overlap 4263359, overlap 4263375 AGGCGCTGGAAGAAC GGCTCTCCTGCCT TGG AGACAGAAGAGCC CTGGACGGCTGGACC HRM2_37970 4263069 - 4265678 + | two-component fusion protein (N:Acyl-CoA reductase-C:Coenzyme F390 synthetase) TERM 4734 4266300 - 4266267 - g 86 -8.9 -4.56597 | overlap 4266269 TCGCTTCGGTAAAAA CATCCCTTGTTCCCG ACAC CGGAAACAAGGAAAA ACCTGAGGGTGCCCG TERM 4735 4266298 - 4266269 - g 90 -13.7 -3.90048 | overlap 4266267 GCTTCGGTAAAAACA TCCCTTGTTCCCG ACAC CGGAAACAAGGAA AAACCTGAGGGTGCC TERM 4736 4266665 - 4266691 + G 90 -8.1 -5.00884 | gap 2 GCAGGGGCAGGCCTT GCCC-TGGCA-AG TGC CTCTGCCATGGGC TTTTTTCAAAACACT HRM2_37980 4265681 - 4266910 + | putative H(+)-antiporter protein (permease of the major facilitator superfamily) HRM2_37990 4267788 - 4266961 - | two-component fusion protein (N:Molybdopterin dehydrogenase, FAD-binding domain-C:Carbon monoxide dehydrogenase medium chain) TERM 4737 4267449 - 4267422 - G 74 -8.3 -4.0942 | opp_overlap 4267423 4267439, overlap 4267423 CACCCAGGAGATAAA GCGCCGGCAGG GTGTCT CCTGCCGGTGA AGCCGTGCAGATATT TERM 4738 4267448 - 4267423 - G 77 -11.8 -3.0517 | opp_overlap 4267423 4267439, overlap 4267422 ACCCAGGAGATAAAG CGCCGGCAGG GTGTCT CCTGCCGGTG AAGCCGTGCAGATAT TERM 4739 4267625 - 4267637 + g 70 -2 -5.0133 | GTTTTTTTTATGGTT TTCA GGTCA TGAA TTTTTTCCAGGCATA coxS 4268255 - 4267785 - | CoxS coxL 4270555 - 4268246 - | CoxL TERM 4740 4268567 - 4268539 - G 100 -14.5 -4.57569 | TCACCTCTTCAAAAA GGGCGTAGCCCAG TCC CTGGGCAACGGCC CCCTGGACCTGCTGC TERM 4741 4269736 - 4269750 + g 76 -4.2 -4.9218 | overlap 4269739 CAAGCATGCTCTCCC TGCGGT CCC ACCACA TTTTTATGGTGCGTC HRM2_38020 4270754 - 4270578 - | hypothetical protein HRM2_38030 4270902 - 4271159 + | hypothetical protein TERM 4742 4271376 - 4271396 + G 70 -8.3 -3.69283 | opp_overlap 4271387, overlap 4271379 TGCTGTGTGCGTTTC TTTCCAGCA CAC TGCTGGTAA TTATTCCATCAGTTG lysE2 4271201 - 4271797 + | LysE2 pfkA2 4272911 - 4271814 - | PfkA2 TERM 4743 4272138 - 4272151 + g 76 -5.2 -4.88918 | ACCTAAACGAACCTC CCGG TCATTT CCGG TTTTGTTTGAAGTGA TERM 4744 4273111 - 4273100 - R 82 -5.8 -5.06414 | GTGGCCGAACAAAAA CCCA TGTT TGGG CGAAAAGATAATCGG caiB 4274384 - 4273140 - | CaiB HRM2_38070 4274713 - 4275222 + | transcriptional regulator (MarR family protein) proX 4275237 - 4276241 + | ProX proW 4276251 - 4277120 + | ProW proV 4277117 - 4278316 + | ProV TERM 4745 4278509 - 4278460 - T 100 -22.4 -3.65812 | opp_overlap 4278469, overlap 4278463 TTGTCTTGAAGAGAA CAACCCAAACGGCCGTCCAGAA TTCCAT TTCTGGACGGCCGTTTTGACTG GGTGTGGGAATGGGT TERM 4746 4278506 - 4278463 - T 100 -20.5 -3.9644 | opp_overlap 4278469, overlap 4278460 TCTTGAAGAGAACAA CCCAAACGGCCGTCCAGAA TTCCAT TTCTGGACGGCCGTTTTGA CTGGGTGTGGGAATG TERM 4747 4278469 - 4278500 + T 100 -20.3 -4.20531 | opp_overlap 4278463 4278460 AGAGAACAACCCAAA CGGCCGTCCAGAA TTCCAT TTCTGGACGGCCG TTTTGACTGGGTGTG mntH 4279800 - 4278574 - | MntH TERM 4748 4279112 - 4279098 - G 73 -9.2 -3.68827 | overlap 4279099 CACCCAGGAGCGAAA CGGCCG TGT CGGCCA GGGCCAGATTCAGAT thiM 4280838 - 4279909 - | ThiM TERM 4749 4280003 - 4280014 + g 71 -7.2 -4.07568 | opp_overlap 4279997 4279986 4279985 GGCATGAAAGTGCCA GGCC CCGA GGCC TTTTCCGCGGCAAGC TERM 4750 4280258 - 4280276 + g 76 -8 -4.17556 | opp_overlap 4280241 4280251 4280248 AGAATGGACGGCCAA CCGGGTTC GTC GGTCCCGG TTTCTTCACCGTCTC TERM 4751 4280396 - 4280414 + g 80 -10.2 -3.65812 | opp_overlap 4280394 GTGAGGGAACAGACC TCCGAGGC ATT GCCCCGGA TTATCTTGCGGGGGG TERM 4752 4281923 - 4281910 - g 74 -2.3 -5.06414 | CCTTCTCAACAAAAA CTACC GAAA GGAAG CATGGTTTTCCACCC TERM 4753 4283125 - 4283149 + G 82 -11.4 -3.66139 | opp_overlap 4283120 CACCATTGAAGTCCA GAGTCTGCCC GGCAA GGGCAGTCTC TTTACCATCTCTCTG HRM2_38130 4281434 - 4283227 + | two-component sensory box histidine kinase/response regulator TERM 4754 4283615 - 4283604 - g 76 -7.2 -4.3277 | CACACAGAAGATAAA GGCC ACAG GGCC ATTGGACAAAAAACA HRM2_38140 4283224 - 4283634 + | two-component system response regulator (Ntr family protein) HRM2_38150 4283668 - 4284942 + | hypothetical protein HRM2_38160 4284939 - 4285625 + | hypothetical protein ppsA7 4285656 - 4288298 + | PpsA7 TERM 4755 4288696 - 4288680 - g 80 -3 -5.30448 | AAAGAAACAGAAAAA CATTGA AGCAA TCAACG AACAACGAATCAAAG HRM2_38180 4288300 - 4288734 + | two-component sensory box histidine kinase/response regulator TERM 4756 4288796 - 4288755 - f 89 -12.4 -2.79183 | GTCATCCCCATGACA GTGGATCTTCCCGACCC-GG TTTC CCTGGGCAGGGAAGATCC-C GGGGGATATGGACGC HRM2_38190 4288832 - 4289254 + | two-component system response regulator HRM2_38200 4289781 - 4289299 - | hypothetical protein HRM2_38210 4290280 - 4289837 - | two-component response regulator (CheY-like receiver domain and a winged-helix DNA-binding domain) HRM2_38220 4291965 - 4290292 - | two-component sensory box histidine kinase/response regulator TERM 4757 4291274 - 4291293 + g 73 -12.1 -2.54504 | overlap 4291273 4291270 4291269 TTCACCATGGTGGTA CCGGCCC CGAAAC GGGCCGG ATCTATTTCACAAAT nadC1 4293572 - 4291962 - | NadC1 TERM 4758 4292531 - 4292495 - G 70 -4.9 -4.63527 | CGATCATGGCAAAAA CAGCTCCAAGGGCCGGG CCC CCAAGTCCGTAGTGCTG CCCGGGGAAGACCAT TERM 4759 4293632 - 4293651 + H 84 -10.8 -3.71672 | TTTGTGCAAGGGGTG TGCCATTG CAGT CAATGGCA TTAATTTTGCTGACG HRM2_38240 4293724 - 4294134 + | two-component response regulator (CheY-like receiver domain and a winged-helix DNA-binding domain) TERM 4760 4295047 - 4295074 + G 77 -9.7 -3.70902 | opp_overlap 4295035 4295046 4295045, overlap 4295046 CCACGGCCAAACACG CGGCCGCCTCC TTCTGT GCCGGCGGCCG TTTCAATCTCGAGCA TERM 4761 4295840 - 4295870 + G 100 -11.2 -4.77925 | overlap 4295861 CAGCGACAACGGGTG CGGTTTTTCCAGGG AGA CCATGGAAAAAGCG TTTTTACCGTTTTTT HRM2_38250 4294356 - 4296053 + | two-component sensory box histidine kinase TERM 4762 4296519 - 4296538 + G 74 -7.2 -4.1673 | gap 1 CAAAAAGGTCAGTGA CGTC-ATGC TGG GCATTGACG TTTATTCCACCATTA TERM 4763 4296848 - 4296871 + G 79 -12.5 -3.14132 | opp_overlap 4296846 AGAAGGTCAAGGATT TCATGGGGG ACATGC CCCCCATGA TTGATGAGGAGACCA HRM2_38260 4296112 - 4297017 + | two-component response regulator (CheY-like receiver domain and a winged-helix DNA-binding domain) nadC2 4297071 - 4298924 + | NadC2 TERM 4764 4298992 - 4298957 - f 75 -5.3 -4.85653 | gap 1, overlap 4298959 CAGAGATAAAATAAA CCG-TCGGGCAGGTCC AGACA GGGCCTGTCCGATCCG GTTCCAGAATCAAGG TERM 4765 4299722 - 4299734 + G 83 -2.7 -5.41143 | GGTGTCATCCATTGT GGTTA TGA TAATC TTTTTTTCGACCATG HRM2_38280 4299195 - 4299794 + | hypothetical protein TERM 4766 4299773 - 4299788 + F 75 -10.4 -2.74322 | opp_overlap 4299767, overlap 4299772 GGTGAACTATTTCAA GGCTGC CGTG GCAGCC CTTTAAAACCTTCGA TERM 4767 4299828 - 4299814 - f 74 -7 -4.4009 | overlap 4299815 TTCGATTTTACAAAA CCCCGG CTA CCGGGC ATCAGCTGTTTTTTT TERM 4768 4299827 - 4299815 - f 77 -10.5 -3.23733 | overlap 4299814 TCGATTTTACAAAAC CCCGG CTA CCGGG CATCAGCTGTTTTTT TERM 4769 4299946 - 4299958 + F 80 -10.5 -3.48593 | ATGCCATCCCTCGTT CCGGC CGT GCCGG TTATATGAAACACTC TERM 4770 4300034 - 4300046 + F 86 -10.5 -3.86524 | GAGCCATACCTCGTT CCGGC CGT GCCGG TTTATAAGAAACTCT TERM 4771 4301311 - 4301293 - g 87 -4.5 -5.47399 | TCAAGCGGAAAAAAA GGTCAAG GATAT CATGACC CAGATTGACGATTAT TERM 4772 4301426 - 4301437 + G 71 -5.8 -4.36903 | overlap 4301421 ATACGGGAAAGTGCC CAGC GGTC GCTG TTTGTGTTTGATGAC HRM2_38290 4300895 - 4301809 + | two-component response regulator (CheY-like receiver domain and a winged-helix DNA-binding domain) nadC3 4301832 - 4303325 + | NadC3 TERM 4773 4303369 - 4303323 - f 100 -11.5 -4.59342 | overlap 4303326 4303327 CTGATTATAAACAAA TAACCGACATGGCCGGAGCAG GGGAT CTGCTCCGGCCACAACGAATG ATGAAACGCCCCTGT TERM 4774 4303366 - 4303326 - f 100 -17.6 -4.39652 | overlap 4303323 4303327 ATTATAAACAAATAA CCGACATGGCCGGAGCAG GGGAT CTGCTCCGGCCACAACGA ATGATGAAACGCCCC TERM 4775 4303365 - 4303327 - f 100 -18.9 -3.22164 | overlap 4303326 4303323 TTATAAACAAATAAC CGACATGGCCGGAGCAG GGGAT CTGCTCCGGCCACAACG AATGATGAAACGCCC TERM 4776 4303457 - 4303489 + F 100 -9.1 -5.9873 | GAAATAGATACTGGG TGAGTGAGTGGGCCT TCC AGGCAAACCCACTCA TTTTTTTTCTGATAC uspA3 4303605 - 4303997 + | UspA3 TERM 4777 4304030 - 4304074 + T 74 -10.1 -3.19442 | opp_overlap 4304036, overlap 4304063 4304066 AATCAGAGCCATTTC GCAAAAGCCATGGTCAAAAAT AAT ATTTTTGACCATGGCTGAAGA TTCAGTCTGTTACCT TERM 4778 4304068 - 4304036 - T 100 -20.9 -4.09864 | opp_overlap 4304030 4304063 4304066 AGCCATTTCGCAAAA GCCATGGTCAAAAAT AAT ATTTTTGACCATGGC TGAAGATTCAGTCTG acsA3 4305661 - 4304084 - | AcsA3 TERM 4779 4306039 - 4306049 + G 72 -4 -4.8667 | opp_overlap 4306039 TTATACTGTAATTAA GAAT AGA ATTC TTTTTCTGGAATATG HRM2_38330 4306010 - 4306660 + | HTH-type transcriptional regulator TERM 4780 4307391 - 4307378 - g 74 -3.9 -5.00884 | ATGCCGTTGAAAAAA TTCTT GTCA AAGAA GGCCGAGTGGTTAAA uspA4 4307050 - 4307565 + | UspA4 TERM 4781 4307647 - 4307606 - T 100 -23.3 -4.59773 | opp_overlap 4307611 TCTGATGGTTAAAAA CAGAAGGTCGAATACGTGG GGTT CCACGTATTCGACCTTTTG TGCACCTTGATTTTC TERM 4782 4307611 - 4307642 + T 100 -21.8 -4.4017 | opp_overlap 4307606 TGGTTAAAAACAGAA GGTCGAATACGTGG GGTT CCACGTATTCGACC TTTTGTGCACCTTGA dctM6 4308996 - 4307686 - | DctM6 TERM 4783 4308111 - 4308099 - G 91 -3.4 -5.75342 | CTGTTCGAAAAAAAA TGCT GGTAA AGCA GGCCGCACCGAACAG TERM 4784 4308293 - 4308279 - G 73 -5 -4.74801 | overlap 4308281 4308292 CAATCCCAGCAAAAA TAGTTC CCA GAACCA GAGCGACCACTGAAA TERM 4785 4308550 - 4308540 - G 70 -8.2 -3.78934 | overlap 4308524 4308522 4308541 TGGGCGGGATAAGAA GGCC CAG GGCC CCTCCGGCCAGGATT dctQ6 4309499 - 4308993 - | DctQ6 TERM 4786 4309570 - 4309544 - R 78 -9.4 -3.63895 | opp_overlap 4309544 TTGAACCAGTGGAAA GACACCGCCC GGAATGT GGACGGCGTC TTTTCCAGGGAAAAA dctP6 4310638 - 4309586 - | DctP6 TERM 4787 4311103 - 4311087 - R 72 -6.5 -4.32233 | opp_overlap 4311087, overlap 4311090 ACAAAAAGTCCAAAA GAGCTCC AAG GGAGTTC TTTTTCGATTTAATC TERM 4788 4311087 - 4311103 + r 100 -8.7 -4.82855 | opp_overlap 4311087 4311090 ACAAAAAGTCCAAAA GAGCTCC AAG GGAGTTC TTTTTCGATTTAATC HRM2_38380 4311341 - 4311117 - | hypothetical protein HRM2_38390 4311360 - 4312208 + | HTH-type transcriptional regulator (LysR family protein) TERM 4789 4312362 - 4312337 - f 100 -3.9 -6.19302 | gap 1, opp_overlap 4312337 4312340, overlap 4312340 ACAGAAGAAAAAAAA TAATGTCCCGGC CCT GCCGGG-CAAAA TTATCATCAACCTTA TERM 4790 4312359 - 4312340 - f 100 -10 -5.08831 | gap 1, opp_overlap 4312340 4312337, overlap 4312337 GAAGAAAAAAAATAA TGTCCCGGC CCT GCCGGG-CA AAATTATCATCAACC TERM 4791 4312541 - 4312530 - g 76 -4.4 -5.0538 | opp_overlap 4312530, overlap 4312540 CCTGAGTTCAAAAAA CATC AAAG GATG TCTTGCCTGCGGCAA TERM 4792 4312950 - 4312935 - g 73 -3.2 -4.93877 | overlap 4312930 GTCCATCAAAGAAAA GGCTAA GGCC TTTGCC CGGAAAATCGTTGCC HRM2_38400 4312402 - 4312968 + | NADPH-dependent FMN reductase, iron-sulfur flavoprotein TERM 4793 4313015 - 4312991 - f 100 -12.9 -3.45768 | opp_overlap 4312989 CCGAATATCAATCAA GGGGACAGGTT AAA AAACTGTCCCC ACTAATTTTCCGCCC TERM 4794 4313300 - 4313265 - f 74 -9.7 -3.1371 | overlap 4313263 4313255 AAGAATCATTGAACA GCACCCGAACAGG ATGATAAAGA CCTGCACGGGTGC GATTAAGGAGAACCA TERM 4795 4315563 - 4315574 + G 76 -5.8 -4.64861 | GCCACACCTCCCCCA GGGA AAAT TCCC TTTGTTTTCCCCAGG gdhA3 4313315 - 4316461 + | GdhA3 hit 4316483 - 4316815 + | Hit TERM 4796 4316824 - 4316843 + F 73 -10 -3.02043 | opp_overlap 4316817 ACGATAAACGCCTTT CCGGCAGA ACCG TTTGCCGG TGTTCAGCCCGAATT TERM 4797 4316927 - 4316900 - f 91 -10.6 -4.20136 | gap 1, overlap 4316902 ACCGGTAAAACCAAA CAGCGGGAAGCAG TCC CTGCT-CCCGCCA CACATTTCGATTTCA TERM 4798 4316925 - 4316902 - f 100 -13.2 -3.695 | gap 1, overlap 4316900 CGGTAAAACCAAACA GCGGGAAGCAG TCC CTGCT-CCCGC CACACATTTCGATTT TERM 4799 4316976 - 4317019 + F 100 -14.9 -4.0896 | gap 1, overlap 4316967 4316977 CCTGCCCGGGTACCA CGTT-TATTTCCTGGAACCC TGGAT GGGTTCCAGGAAATAGAACA TTTTAAAGGAGATTT TERM 4800 4316977 - 4317018 + F 100 -18.4 -3.04894 | gap 1, overlap 4316976 CTGCCCGGGTACCAC GTT-TATTTCCTGGAACCC TGGAT GGGTTCCAGGAAATAGAAC ATTTTAAAGGAGATT corA2 4317037 - 4318101 + | CorA2 TERM 4801 4318241 - 4318196 - f 93 -12.7 -3.05816 | opp_overlap 4318207, overlap 4318207 TCAGCTCGTATTCAA GGCGTATCAAAGGGCGCATAT TGAA ATATGTGCCCTTTGATGCAAC GCAGAAGACGAGCTG TERM 4802 4318230 - 4318207 - f 81 -9.6 -3.74747 | opp_overlap 4318207, overlap 4318196 TCAAGGCGTATCAAA GGGCGCATAT TGAA ATATGTGCCC TTTGATGCAACGCAG TERM 4803 4318207 - 4318230 + F 93 -11.8 -3.72576 | opp_overlap 4318207 4318196 TCAAGGCGTATCAAA GGGCGCATAT TGAA ATATGTGCCC TTTGATGCAACGCAG HRM2_38440 4318386 - 4318478 + | hypothetical protein TERM 4804 4318735 - 4318725 - g 76 -5.4 -4.87786 | GCAAGTCCATAAAAA CAGA CAA TCTG AACTGGGTCATCAAT TERM 4805 4319380 - 4319402 + G 70 -11.4 -2.53176 | overlap 4319379 AGAAAAGGTTGATCT CCTTTTGAAG GCC CTTCAAGAGG CTCATTTTATCTAAT etfB3 4318643 - 4319416 + | EtfB3 TERM 4806 4319563 - 4319546 - g 100 -5.5 -5.79588 | opp_overlap 4319548, overlap 4319548 GGAAAACTAAAAAAA GTCAGCT TAGA AGCTGTC TGTCAGGGTCAAAGA TERM 4807 4319711 - 4319701 - g 74 -2.4 -5.16237 | opp_overlap 4319704 4319707 AATTGCAGGAAAAAA CCCG GAT CTGG CAGAATCAATGCCCG etfA3 4319492 - 4320472 + | EtfA3 TERM 4808 4320629 - 4320654 + G 76 -6.9 -4.56597 | gap 1, opp_overlap 4320629 4320628 AAAGGGCAAACAGAT CGGCTCCCAC GCCCTCA GTGG-AGCCG TTTTTAACCCCAAAG TERM 4809 4321095 - 4321081 - g 78 -6.4 -4.76892 | AGATCAACCGAAAAA TGGGAA TCT TCCCCA AAGAGGTCCCCCAGA etfO 4320480 - 4322150 + | EtfO TERM 4810 4322885 - 4322866 - g 73 -2.8 -5.03747 | opp_overlap 4322867, overlap 4322867 AAACTCTGCAAAAAA GCAGGAAT AACC ATCCCTGT TGATCCGACAAAACG HRM2_38480 4322209 - 4323378 + | FAD dependent oxidoreductase TERM 4811 4323438 - 4323394 - T 100 -20.1 -5.50723 | opp_overlap 4323395 4323396 4323400, overlap 4323396 TTAGTAAAACAAAAA CACCCAGCGCCAGGCCCTTTT TAC AAAAGAGCCTGACGCCGGGCT TTAGTTTGATGAAAT TERM 4812 4323395 - 4323437 + T 100 -14.8 -4.10552 | opp_overlap 4323394 4323396, overlap 4323396 4323400 TAGTAAAACAAAAAC ACCCAGCGCCAGGCCCTTTT TAC AAAAGAGCCTGACGCCGGGC TTTAGTTTGATGAAA TERM 4813 4323436 - 4323396 - T 100 -24.9 -4.37486 | opp_overlap 4323395 4323396 4323400, overlap 4323394 AGTAAAACAAAAACA CCCAGCGCCAGGCCCTTTT TAC AAAAGAGCCTGACGCCGGG CTTTAGTTTGATGAA TERM 4814 4323396 - 4323436 + T 100 -18.3 -3.05849 | opp_overlap 4323396 4323394, overlap 4323395 4323400 AGTAAAACAAAAACA CCCAGCGCCAGGCCCTTTT TAC AAAAGAGCCTGACGCCGGG CTTTAGTTTGATGAA HRM2_38490 4324194 - 4323454 - | hypothetical protein gltA3 4325633 - 4324341 - | GltA3 TERM 4815 4325086 - 4325098 + g 71 -6.3 -4.37886 | GGGTAGATCACCTGA TATCC CAT GGATA TTTTGTAGGACATGG TERM 4816 4325244 - 4325228 - G 91 -10.9 -4.4767 | CCATGGACGATAAAA TGCCCAT GGG ATGGGCA TTGGGCGGAAAATTC gcdA1 4327534 - 4325801 - | GcdA1 TERM 4817 4327498 - 4327512 + g 73 -2.8 -5.04385 | CCTTTTTCAATGGGT TGCC AAAGTCC GGCA TTTTTTCAAAATATG HRM2_38520 4327860 - 4327639 - | biotin-requiring enzyme (barrel sandwich hybrid superfamily) oadB2 4329072 - 4327957 - | OadB2 TERM 4818 4328596 - 4328583 - G 70 -9.5 -3.23296 | overlap 4328576 AAGAATAGGCAGCAA CGGCG CAAA CGCCG AGCATGTGGGGGGCA TERM 4819 4328931 - 4328959 + g 79 -5.1 -5.0538 | overlap 4328934 CCAGGATACCGAACC CGATGGGCAGCAG CAG CAGCGGCTCATAG TTTTTTGCAATGGCA TERM 4820 4329245 - 4329257 + r 100 -10.5 -4.63218 | opp_overlap 4329244 CAACACTCAGTCAAG GGGCC ACA GGCCC TTTTCTTCAAGAACA pcaC 4329658 - 4329236 - | PcaC acd11 4330887 - 4329670 - | Acd11 porB2 4332267 - 4330972 - | PorB2 TERM 4821 4331111 - 4331072 - G 71 -6.2 -4.35926 | overlap 4331094 ATTTCAAAGGTAAAA CCCTTGCCCTCCTTGGCC AGAA GCCCCAGGGAAGCCAGGG CCCAATCATGCCTCT TERM 4822 4331873 - 4331859 - G 74 -11.4 -3.07307 | GAAATTCCGATCCAA CCACGG CAG CCGTGG GGGTGGTGGAACTGT porC2 4333375 - 4332260 - | PorC2 TERM 4823 4332472 - 4332491 + g 83 -2.8 -5.42862 | GGGTTTTAAGTGTCA GGGATG AAACAGGA CGTCCC TTTTTTTCAAGATGT TERM 4824 4332996 - 4332973 - G 71 -7.4 -4.05004 | gap 1, opp_overlap 4332973, overlap 4332974 GTACCAGAACAATAA CGGGC-ACACC GCC GGTGTTGCCCC ACCGCATGAACTGAA TERM 4825 4332995 - 4332974 - G 70 -10.9 -3.02279 | gap 1, opp_overlap 4332973, overlap 4332973 TACCAGAACAATAAC GGGC-ACACC GCC GGTGTTGCCC CACCGCATGAACTGA TERM 4826 4333148 - 4333160 + g 86 -6.2 -5.15634 | TCCAGGGCCGGAAGT GGCC GTAAG GGCC TTTTTTCCTGCCATG TERM 4827 4333742 - 4333754 + G 72 -4.1 -4.7497 | GGAAGCGTATATGGG CATTC GAA GGATG TTTTTCATCAATGAA TERM 4828 4333967 - 4333918 - g 73 -5.1 -4.65666 | gap 1, overlap 4333926 ATACTGAAAAAATAA GCCTTAAA-GAGCTCACCGAAATC TAT GACTTCCGTGAACTCATCGAAGTC TCCCTGCTGGCCAAA TERM 4829 4333958 - 4333926 - g 85 -12.1 -3.65722 | overlap 4333918 AAAATAAGCCTTAAA GAGCTCACCGAAATC TAT GACTTCCGTGAACTC ATCGAAGTCTCCCTG TERM 4830 4334040 - 4334028 - g 85 -4.1 -5.47399 | GCAACGTTAAAAAAA GCCTT GAA AAAGC ACCTCAACGCCAAAA HRM2_38580 4333686 - 4334375 + | HTH-type transcriptional regulator (GntR family protein) TERM 4831 4334501 - 4334480 - f 71 -3.1 -5.00616 | GTCGTCCCTAAAAAA TAAAATTTC TGTT GTAATTTTA AAGAATCTTACGTAT TERM 4832 4334784 - 4334757 - g 76 -3.4 -5.08824 | overlap 4334758 4334759 TTTGTACTCAAAAAA GCCCCTGAAGAT ATCC ATCTCCAGGAAA TATATTGCGCCCTGG TERM 4833 4334947 - 4334926 - g 70 -4.5 -4.71234 | gap 1 AAATTGAAGATAAAA TGCGGACAAT AAA ACTGTCC-CA CATCATTAATCACAT HRM2_38590 4334553 - 4334984 + | hypothetical protein TERM 4834 4335273 - 4335251 - g 84 -10.6 -4.11304 | opp_overlap 4335251 4335254, overlap 4335257 TGAACTGAGAAAGAA CAAGAATGCC CTT GGCACCCTTG TCTCCTATGAAATGG TERM 4835 4335267 - 4335257 - g 71 -6.8 -4.18443 | opp_overlap 4335254 4335251, overlap 4335251 GAGAAAGAACAAGAA TGCC CTT GGCA CCCTTGTCTCCTATG TERM 4836 4335608 - 4335618 + G 74 -2.4 -5.1101 | CAAGTCAAACAATCT GCCC GAA GGCC TTTTTTCCCTGATCG TERM 4837 4335821 - 4335834 + G 74 -8.1 -4.02581 | opp_overlap 4335820 GGCAAATCTGAAACT TGCCG TTCC CGGCA TTGTCTTTTCTGCCG HRM2_38600 4334985 - 4336517 + | NAD-dependent aldehyde dehydrogenase family protein TERM 4838 4336689 - 4336722 + F 100 -19 -2.52464 | ATTTGCGGTCCTTAG CATCCGTGCAGGTC AACAAG GGCCTGCACGGATG TCAATTAAGAAGCAC TERM 4839 4337154 - 4337175 + G 70 -9.5 -3.25823 | gap 1 CGGTTTGAGGGCAAT CTGTTCGCCC TTG GGG-GAACAG TTGCTGTGGCCCCGG HRM2_38610 4336839 - 4337435 + | putative translation elongation factor TERM 4840 4338171 - 4338161 - g 73 -3.2 -5.0133 | TATCTGGGGAAAAAA CGTC CCG GACA CAACGGACCTGCTCC TERM 4841 4338509 - 4338497 - g 73 -9.1 -3.6682 | CGTGACCCAGGCAAA GGGGA TTC TCCCC ACCAAAAACTGGCAG TERM 4842 4339016 - 4339005 - g 74 -3.6 -5.00884 | overlap 4339011 4339012 ATGGTCTCCAAAAAA CAGG AATT CCCG GGCTATGAACCCCGG aor7 4337739 - 4339568 + | Aor7 TERM 4843 4339669 - 4339613 - T 73 -7.5 -4.22927 | gap 2, overlap 4339607 TGATCAATAGACAAA CGTGCCTCTGGAAGGATATCGCATA AAATCAACG TATGCG-TA-CCTCCCAGAGGCGAG CGGCCACCGGCCCCT HRM2_38630 4339983 - 4339684 - | hypothetical protein TERM 4844 4339765 - 4339779 + g 82 -3.5 -5.26119 | GGCCCGGGCAAAGAC GATCC AGGCG GGGTC TTTTGTTTTTCCGCA TERM 4845 4340316 - 4340292 - R 76 -10.8 -2.52896 | overlap 4340296 CCACTCCCTAACCGA CACACTTTCC CGGAC GGAAAGCGTG CCAGCGAAGAACAAT gcdA2 4342069 - 4340336 - | GcdA2 TERM 4846 4342033 - 4342047 + g 73 -2.8 -5.04385 | CCTTTTTCAATGGGT TGCC AAAGTCC GGCA TTTTTTCAAAATATG HRM2_38650 4342395 - 4342174 - | putative pyruvate carboxylase Pcb oadB3 4343715 - 4342600 - | OadB3 TERM 4847 4343574 - 4343602 + g 79 -5.1 -5.0538 | overlap 4343577 CCAGGATACCGAACC CGATGGGCAGCAG CAG CAGCGGCTCATAG TTTTTTGCAATGGCA acd12 4345094 - 4343931 - | Acd12 gctB 4345961 - 4345200 - | GctB gctA 4346954 - 4345977 - | GctA TERM 4848 4346211 - 4346200 - G 71 -7.2 -4.07885 | CAGGCCGTGGGAAAA GCCC CGTT GGGC ACATGGACCACGGCA TERM 4849 4346243 - 4346264 + g 74 -2.3 -5.17576 | CCACATGGATGAAAG GAATCTGGT TTTG ATTGGATTC TTTTTTGAGTTCGTC TERM 4850 4347051 - 4347063 + r 100 -10.5 -4.3739 | AGCAAATACCTCGCT CCGGC CGT GCCGG TTTTATAAGAAACTC aor8 4349597 - 4347822 - | Aor8 gdhA4 4352765 - 4349619 - | GdhA4 TERM 4851 4349860 - 4349875 + g 75 -9 -3.92745 | opp_overlap 4349848, overlap 4349840 4349867 ACATGCCAGACCATG TCCTGG TCTT CCAGGA TTTCTGGAAGTTTTT TERM 4852 4349867 - 4349885 + g 100 -9.6 -5.06414 | opp_overlap 4349848, overlap 4349860 AGACCATGTCCTGGT CTTCCAGG ATT TCTGGAAG TTTTTCTTCAAACAG TERM 4853 4351923 - 4351911 - G 83 -9.1 -4.29929 | opp_overlap 4351916 ATTAAAGGCAAGAAA CGACC CCA GGTCG GCCAGGATTTCTTTT TERM 4854 4352081 - 4352058 - G 70 -8.8 -3.53811 | GCCATGGTCTTCAAA CAGTCGCCTG AGCA CAGGCAGCTG GGGGGATGCAAAATC TERM 4855 4352691 - 4352678 - G 71 -5.3 -4.53303 | opp_overlap 4352678 CAGCCTCATATAAAA TCTTG AAAT CAAGA TTTACCCCCTGGGCC dctM7 4354118 - 4352796 - | DctM7 dctQ7 4354624 - 4354115 - | DctQ7 TERM 4856 4354572 - 4354549 - G 78 -3.8 -5.13344 | gap 1, opp_overlap 4354537 4354549, overlap 4354537 4354552 ACATGAACACAAAAA TCAGGTAGGAC GCT GCCCTGCC-GA TCTTCTTGTTCATCG TERM 4857 4354659 - 4354694 + r 100 -19 -4.40572 | opp_overlap 4354661, overlap 4354660 4354661 4354683 TGCTGATGTGGATAG GATCAGCCCCGGACCC ATCC GGGTCCGGGGCTGACG TTTTCTAGAACTTAT TERM 4858 4354660 - 4354693 + r 100 -22.5 -3.2362 | opp_overlap 4354661, overlap 4354659 4354661 4354683 GCTGATGTGGATAGG ATCAGCCCCGGACCC ATCC GGGTCCGGGGCTGAC GTTTTCTAGAACTTA TERM 4859 4354692 - 4354661 - R 100 -26 -2.62983 | opp_overlap 4354660 4354659 4354661 4354683 CTGATGTGGATAGGA TCAGCCCCGGACCC ATCC GGGTCCGGGGCTGA CGTTTTCTAGAACTT TERM 4860 4354661 - 4354692 + r 100 -26 -2.5369 | opp_overlap 4354661, overlap 4354660 4354659 4354683 CTGATGTGGATAGGA TCAGCCCCGGACCC ATCC GGGTCCGGGGCTGA CGTTTTCTAGAACTT dctP7 4355757 - 4354699 - | DctP7 HRM2_38750 4356047 - 4356325 + | hypothetical protein gabT 4356371 - 4357678 + | GabT TERM 4861 4358698 - 4358686 - g 76 -5.5 -4.89852 | CGATACCCAGAAAAA TGCAG ACG CCGCA GCCAAAACGGTCATA mop2 4357808 - 4360564 + | Mop2 TERM 4862 4360599 - 4360587 - T 80 -10.5 -3.54475 | overlap 4360588 CCCGTCACTATATAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 4863 4360625 - 4360588 - T 71 -9.7 -2.72471 | overlap 4360587 CCGTCACTATATAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATATAGGAACTCTA TERM 4864 4360840 - 4360854 + T 81 -4.2 -5.2696 | overlap 4360842 CGGGTTTTTAGGTCA TGTGCC CAG GGCGTA TTTTTTAAGTTTTCG HRM2_38780 4362636 - 4360837 - | sigma-54 dependent sensory box histidine kinase/response regulator TERM 4865 4362724 - 4362734 + H 71 -3.2 -5.02074 | GGACAAATTTAAAAT CCGT ACC ATGG TTTTTTGGCCCATGA TERM 4866 4363617 - 4363605 - g 74 -3.5 -4.96762 | opp_overlap 4363605 CAGACAGGATAAAAA TTTTT CTA AAAAA TTTCCCGAAGAATGG HRM2_38790 4362859 - 4364472 + | GGDEF domain family protein HRM2_38800 4365261 - 4364512 - | putative plasmid replication/partition related protein ParB TERM 4867 4364997 - 4364983 - G 73 -6.4 -4.52857 | opp_overlap 4364982 ACGCTGGATATAAAA GCTGTA AAG CACAGC ATCGTCTTCATCGTC TERM 4868 4365234 - 4365244 + g 72 -4 -4.87626 | opp_overlap 4365234 TCAGCTCAGAAATAT TGAT AAG ATCA TTTTTCATATTCACC TERM 4869 4365326 - 4365355 + H 72 -10.1 -2.83042 | gap 1, opp_overlap 4365315 4365326, overlap 4365325 CAACGAAATTGGAAA CTTCTCCACCGGTG ATG CACCGGTGAA-AAG ATTATATAATTTTTT TERM 4870 4365355 - 4365326 - H 100 -12.3 -3.74178 | gap 1, opp_overlap 4365326 4365325, overlap 4365315 CAACGAAATTGGAAA CTTCTCCACCGGTG ATG CACCGGTGAA-AAG ATTATATAATTTTTT HRM2_38810 4365576 - 4365710 + | hypothetical protein apt2 4365798 - 4366358 + | Apt2 TERM 4871 4366376 - 4366413 + T 78 -9.2 -3.68073 | opp_overlap 4366377 4366381, overlap 4366381 GCCACCCAGAAAAAA ATAAAGGGAGTCATGG AAGACA CCATGACTCCCTCTGG TTATTCACTGGGATG TERM 4872 4366412 - 4366377 - T 100 -12.7 -5.64274 | opp_overlap 4366376 4366381, overlap 4366381 CCACCCAGAAAAAAA TAAAGGGAGTCATGG AAGACA CCATGACTCCCTCTG GTTATTCACTGGGAT TERM 4873 4366381 - 4366408 + T 100 -15.7 -3.02459 | opp_overlap 4366377 4366381, overlap 4366376 CCAGAAAAAAATAAA GGGAGTCATGG AAGACA CCATGACTCCC TCTGGTTATTCACTG TERM 4874 4366408 - 4366381 - T 100 -15.7 -5.27709 | opp_overlap 4366381 4366376, overlap 4366377 CCAGAAAAAAATAAA GGGAGTCATGG AAGACA CCATGACTCCC TCTGGTTATTCACTG dctP8 4367444 - 4366431 - | DctP8 dctM8 4368793 - 4367516 - | DctM8 TERM 4875 4368141 - 4368131 - G 72 -8.2 -3.827 | AATAATCAAGGTAAA GCCC AGC GGGC CAATGGCCTCAATGG TERM 4876 4368159 - 4368185 + g 76 -5 -4.86862 | overlap 4368175 ATGGCCTCAATGGTT GCCTGCTTCAGG TTA CCGAAAGTGGGC TTTTGATTTTTTGGA dctQ8 4369318 - 4368812 - | DctQ8 HRM2_38860 4369565 - 4369464 - | hypothetical protein TERM 4877 4369598 - 4369610 + H 74 -6.3 -4.57218 | TAACAAGAAGCAGGT TCCTA TCC TAGGA TTTTAATTGTATTAT TERM 4878 4370547 - 4370531 - g 87 -4.3 -5.47821 | overlap 4370533 ATTGATCCAAAAAAA CAGGCCA TTG CGGCCTC ATGGCCAAACAACAT TERM 4879 4370545 - 4370533 - g 74 -6.9 -4.37763 | overlap 4370531 TGATCCAAAAAAACA GGCCA TTG CGGCC TCATGGCCAAACAAC HRM2_38870 4369715 - 4370677 + | NAD-dependent nucleotide-diphosphate-sugar epimerase family protein HRM2_38880 4373364 - 4370710 - | two-component sensory box histidine kinase/response regulator TERM 4880 4372321 - 4372311 - G 70 -2.4 -4.98522 | AATCCGACACAAAAA GGCC AAG GGCG TAATCCCCATTTTTC TERM 4881 4373208 - 4373195 - G 73 -3.1 -5.03715 | overlap 4373181 AGCACCTCTAAAAAA GATGC GTTC ACATC AATGATATTTCCATT TERM 4882 4373291 - 4373307 + g 76 -5.1 -4.78572 | overlap 4373285 4373293 CTTTCCTCACTCTGT TTCAGCG CTT CGTTGGA TTTTATTGCTTCAAG aspC4 4373767 - 4374885 + | AspC4 TERM 4883 4374930 - 4374918 - T 78 -10.5 -3.34962 | CCGCAGATTTTATAA CCGGC AGG GCCGG AGCATGATATCTGCC HRM2_38900 4375521 - 4375024 - | transcriptional regulator (PadR family protein) HRM2_38910 4376615 - 4375530 - | ferredoxin (4Fe-4S iron-sulfur cluster binding protein) crtA1 4376823 - 4377545 + | CrtA1 HRM2_38930 4380765 - 4377655 - | cold-shock inducible two-component sensory box histidine kinase /regulatory protein (Ntr family protein) TERM 4884 4378040 - 4378060 + g 100 -6.9 -5.68438 | TCAACCAGCAGTATC TTTTCAGTG CCA CCCTGAAAA TTTTTTGTTTCCTGG TERM 4885 4380255 - 4380275 + g 82 -11.9 -3.53012 | overlap 4380256 TCTCCATCAGCTGTA TCGTCTCCA TCA TGGAGACGG TTTCAACAACGCCGG TERM 4886 4380256 - 4380274 + g 79 -13.2 -2.71712 | overlap 4380255 CTCCATCAGCTGTAT CGTCTCCA TCA TGGAGACG GTTTCAACAACGCCG HRM2_38940 4382206 - 4381262 - | putative uroporphyrinogen-III decarboxylase TERM 4887 4381401 - 4381389 - G 76 -3.3 -5.13343 | GAACTTAAAATAAAA CAGCC TCC GGGTG TCATGGCCTTTAACA TERM 4888 4381502 - 4381477 - G 77 -11.9 -3.14881 | overlap 4381492 GAAGCGGTGCATCAA TCCCAGCCATG ATAA CATGGTTGGGA CCCATGAGGTCCCTC HRM2_38950 4384146 - 4382311 - | ferredoxin (4Fe-4S iron-sulfur cluster binding protein) HRM2_38960 4384875 - 4384543 - | hypothetical protein TERM 4889 4384790 - 4384800 + g 78 -2.4 -5.3658 | AGCCTTGCCATGTAT CCCG GCT CCGG TTTTATTTTTATGGT TERM 4890 4385942 - 4385956 + G 73 -3.4 -4.91109 | opp_overlap 4385942, overlap 4385942 TGCAGGCTTCAAGCA CGGGGG CTT CCCTGG TTTTTATCCTGGCCG TERM 4891 4386004 - 4385992 - g 70 -4.8 -4.63218 | GGTTTTGGAACAAAA GCAG GCTTG CTGC CCTTCCATGTCTGGC TERM 4892 4386516 - 4386528 + G 75 -9.1 -3.86822 | CGTTTGTGCCCTGCC GCCGT TGA ACGGC TTTATCAGCGAATTC TERM 4893 4386556 - 4386591 + G 71 -10.5 -3.14468 | TTCCTCATCTATTTT GGTGCCTTTTCTTCC CTGTAC GCAAGTAAAGGCACC TTCAGTGTCCTGGCA TERM 4894 4386948 - 4386965 + G 70 -9.1 -3.63744 | overlap 4386946 4386950 CACCATACTTTTACT TGCCGGC CTTC GCCGGTA TCTTTTAAAAAACAG TERM 4895 4386950 - 4386963 + G 72 -9.5 -3.39908 | overlap 4386948 4386946 CCATACTTTTACTTG CCGGC CTTC GCCGG TATCTTTTAAAAAAC hyfB 4385350 - 4387317 + | HyfB hyfC 4387331 - 4388221 + | HyfC TERM 4896 4388730 - 4388773 + G 72 -4.1 -4.8543 | gap 2 TGGCATGGCCATGGC CATCCAG--GAACCCTTTATT GTGG AATTAAGTGTTCTGCTGGATG TTTTTGTGGCGGTTC hyfE 4388227 - 4388874 + | HyfE TERM 4897 4389564 - 4389550 - g 71 -7.1 -4.26903 | overlap 4389551 GGTACGGCACTAAAA TGGGG CTTGC CCCCA TGCACAACTGGCTGC TERM 4898 4389687 - 4389714 + G 74 -6.9 -4.32034 | gap 1, opp_overlap 4389671, overlap 4389682 4389682 GTGGTCATGACCGCA GCCGGTCTC-GG CCAGA CCAGCGGCCGGC TTTTCATGATCCTGG TERM 4899 4390262 - 4390275 + G 74 -8.1 -4.03167 | GTCCATTGCGCCCCT TGCCG TTTT CGGCA TTCTTTCCCTTATCC hyfF 4388871 - 4390361 + | HyfF TERM 4900 4390375 - 4390362 - g 72 -8.1 -3.84406 | GTTGGAGGACAATAA TGGGG AATT CCCCA AAAAAAAGTTTAACG hyfG 4390361 - 4391872 + | HyfG hyfI 4391890 - 4392666 + | HyfI HRM2_39030 4392694 - 4392981 + | ATP-dependent RNA helicase DbpA dbpA 4392962 - 4393360 + | DbpA rscR 4393450 - 4394412 + | RscR TERM 4901 4394578 - 4394537 - T 95 -12.4 -3.35867 | gap 1, overlap 4394539 4394540 TTAATCTTGAATTAA CACGATGACCTGCTGCTGC GGTTA GCAGTAGCAGGCCATCA-G CACCGCTTGTTAGGC TERM 4902 4394577 - 4394539 - T 100 -16.1 -3.24597 | overlap 4394537 4394540 AATCTTGAATTAACA CGATGACCTGCTGCTGC GGTTA GCAGTAGCAGGCCATCA GCACCGCTTGTTAGG TERM 4903 4394576 - 4394540 - T 100 -17.4 -2.54276 | overlap 4394539 4394537 ATCTTGAATTAACAC GATGACCTGCTGCTGC GGTTA GCAGTAGCAGGCCATC AGCACCGCTTGTTAG TERM 4904 4394582 - 4394594 + T 87 -5.5 -5.49568 | GCAGGCCATCAGCAC CGCTT GTT AGGCG TTTTTATTTTCGGTT HRM2_39060 4395508 - 4394588 - | hypothetical protein HRM2_39070 4395899 - 4396141 + | hypothetical protein HRM2_39080 4396806 - 4396162 - | hypothetical protein TERM 4905 4396817 - 4396833 + r 78 -4.4 -5.16206 | GACATATTTATTTCC CGGCAT GTAAA ATGCTG TTTTTATATTGCTTT TERM 4906 4397285 - 4397316 + r 100 -23.2 -2.54387 | opp_overlap 4397272 4397290, overlap 4397290 GATGAGCACCAGGCT CAAAATGCCCCGCG CGGG CGCGGGGCATTTTG TAGATTGAACGTTTA TERM 4907 4397311 - 4397290 - R 100 -17.3 -4.12188 | opp_overlap 4397285 4397290 GCACCAGGCTCAAAA TGCCCCGCG CGGG CGCGGGGCA TTTTGTAGATTGAAC TERM 4908 4397290 - 4397311 + r 100 -17.3 -4.4715 | opp_overlap 4397290, overlap 4397285 GCACCAGGCTCAAAA TGCCCCGCG CGGG CGCGGGGCA TTTTGTAGATTGAAC ahpC 4397999 - 4397340 - | AhpC TERM 4909 4397787 - 4397798 + g 70 -4.4 -4.60487 | opp_overlap 4397787 GGACATACCAATCAA CTTG CAAC CAAG TTTTTCAAACTCCTC HRM2_39100 4398382 - 4398176 - | hypothetical protein thiF 4398857 - 4398429 - | ThiF TERM 4910 4398498 - 4398519 + g 70 -9.5 -3.30443 | gap 1 CAGAATCAGCAGTCT GTCCTCGGAA ATA TTCCG-GGAC TTCATGTAGTCATAG TERM 4911 4398734 - 4398751 + g 79 -7.7 -4.4874 | overlap 4398728 CAATGGTCACCGGTT CCTGGGT TTCT ATCCAGG TTTTGACTTTTTCAG TERM 4912 4399504 - 4399514 + r 71 -4 -4.79075 | overlap 4399495 CTGGTGTCAATAATT TTTG ATA CAAA TTTTATTGAATTTTT HRM2_39120 4400442 - 4399528 - | HD-GYP hydrolase domain family protein TERM 4913 4400325 - 4400340 + g 83 -3.2 -5.39721 | overlap 4400326 CAAATGATCCTTCCT TCAGGT TTTC ACCTGC TTTTTTATATAGTAC TERM 4914 4400546 - 4400527 - H 78 -7.2 -4.48263 | TAGACAAGATTAAAA CTGGACAT CTCA ATATCCAG CCCCCACCAAAAGGA TERM 4915 4400678 - 4400700 + H 73 -5.6 -4.41494 | overlap 4400680 CAAACGTTATGGATG TTGCTACTAA ATA TTGGTAGCTA TTTTGATTGGACATA TERM 4916 4400680 - 4400698 + H 75 -8.2 -3.8125 | overlap 4400678 AACGTTATGGATGTT GCTACTAA ATA TTGGTAGC TATTTTGATTGGACA TERM 4917 4401920 - 4401886 - g 70 -9.2 -3.6106 | opp_overlap 4401884 GCCAATACTTCCAAA CGTGTCACCGGCGG CATTTAT CCGCCGCTAACGCG AACCTTTGTCTTTGA TERM 4918 4402006 - 4402017 + G 74 -4.4 -4.82863 | overlap 4402004 AAGGCCGGGGCCATG GTTG TTGC CAAC TTTCTTTTGTCCTTG HRM2_39130 4400932 - 4402248 + | uncharacterized extracellular solute-binding family protein TERM 4919 4402482 - 4402467 - g 71 -7.6 -4.07687 | opp_overlap 4402481, overlap 4402481 ATTTCTGCTCGAAAA CCTGAT GGAA ATCAGG GCCGCAGGTCAGCTG TERM 4920 4403100 - 4403110 + G 79 -6.8 -4.73388 | ATTGCAGACGGACAC CGGT TCA ACCG TTTTTACTGCCGCTT TERM 4921 4403576 - 4403587 + G 70 -4.4 -4.70659 | overlap 4403565 AATATGTCAATTTGG CATC CGTT GATG TTTTTGGATATACCC TERM 4922 4405266 - 4405297 + G 100 -10.1 -6.02914 | TTATACAGCTGATGT CATCGCCCACCAG GGTATA CTGGAGGACGATG TTTTTTTTATATCCA HRM2_39140 4402270 - 4405374 + | two domain fusion protein (N:Methyl-accepting chemotaxis protein-C:sensory box histidine kinase/response regulator) HRM2_39150 4406751 - 4405411 - | putative choline dehydrogenase and related flavoprotein HRM2_39160 4407068 - 4406790 - | hypothetical protein TERM 4923 4406941 - 4406959 + g 81 -6 -5.00616 | overlap 4406935 TTGATTTTACTTTTG GAAAGCTT ATG ACGCTTTC TTTTTTCAAGAAGAA HRM2_39170 4407403 - 4407723 + | hypothetical protein TERM 4924 4408372 - 4408362 - g 76 -8.2 -4.13945 | opp_overlap 4408362 4408361 ACCTGGACCGGAAAA CCGC CAA GCGG ATTATCGAGTTGATG TERM 4925 4408485 - 4408464 - g 80 -10.2 -3.66666 | overlap 4408483 TGGAAAACGTGGAAA CCGTCTTC ACCCTG GAAGACGG CAGACTGCAGGAGGA HRM2_39180 4407827 - 4408516 + | ABC-type lipoprotein release transporter, ATP-binding protein (ATPase) TERM 4926 4409603 - 4409574 - g 70 -11.5 -2.60194 | overlap 4409573 4409577 ATTGCCGGAATGAAC GCAGCCCAAATCA GTTT TGATTTCGGCCGC CAGAAGGGGCTGCTG HRM2_39190 4408509 - 4409753 + | ABC-type lipoprotein release transporter, permease component TERM 4927 4409985 - 4410021 + GF 75 -7.1 -4.29106 | opp_overlap 4409981, overlap 4409988 ACATAGCAAATCCTG GTGGTGACCAGTCCCGC AAC GCCGGGCCAGTCACTGC TTTATTCCTATCCGA TERM 4928 4410037 - 4410053 + GF 74 -9.4 -3.28791 | TTTATTCCTATCCGA CCAGGG AGTGA CCCTGG TTATCGCCGGAGAAT HRM2_39200 4409771 - 4410172 + | iron-molybdenum cluster-binding family protein HRM2_39210 4410141 - 4410902 + | hypothetical protein TERM 4929 4410982 - 4410996 + GT 77 -8.6 -3.95022 | TCTCCGGTTCATGCA GCTGAA GAG TTCAGC TTTGATGTTGATGAA HRM2_39220 4410853 - 4412214 + | hypothetical protein TERM 4930 4412354 - 4412296 - T 80 -10.5 -3.49232 | gap 1, opp_overlap 4412305 4412318, overlap 4412300 4412302 4412318 CCTTCAAACAGAATA CCAACA-CGGCATTTATCAGAAATGCCG ACAT CGGCATTTCTGATAAATGTTGATGCATG GGACCTTTAAATTAT TERM 4931 4412350 - 4412300 - T 100 -16.5 -3.48236 | gap 1, opp_overlap 4412305 4412318, overlap 4412296 4412302 4412318 CAAACAGAATACCAA CA-CGGCATTTATCAGAAATGCCG ACAT CGGCATTTCTGATAAATGTTGATG CATGGGACCTTTAAA TERM 4932 4412347 - 4412302 - T 100 -19.3 -3.29445 | opp_overlap 4412305 4412318, overlap 4412300 4412296 4412318 AACAGAATACCAACA CGGCATTTATCAGAAATGCCG ACAT CGGCATTTCTGATAAATGTTG ATGCATGGGACCTTT TERM 4933 4412305 - 4412344 + T 100 -24 -3.18264 | opp_overlap 4412302 4412300 4412296 4412318, overlap 4412318 AGAATACCAACACGG CATTTATCAGAAATGCCG ACAT CGGCATTTCTGATAAATG TTGATGCATGGGACC TERM 4934 4412318 - 4412331 + T 74 -8.1 -3.99062 | opp_overlap 4412302 4412300 4412296 4412318, overlap 4412305 GGCATTTATCAGAAA TGCCG ACAT CGGCA TTTCTGATAAATGTT TERM 4935 4412331 - 4412318 - T 74 -8.1 -3.97947 | opp_overlap 4412318 4412305, overlap 4412302 4412300 4412296 GGCATTTATCAGAAA TGCCG ACAT CGGCA TTTCTGATAAATGTT cmk2 4413246 - 4412410 - | Cmk2 TERM 4936 4413527 - 4413553 + r 77 -3.7 -5.1963 | overlap 4413528 4413531 TATATGGGTCAGGCG GTAAGTCCGAT TATCC AGCGGACTTAA TTTTTCTTCATTAGG HRM2_39240 4414567 - 4413575 - | hypothetical protein TERM 4937 4413850 - 4413860 + g 91 -5.4 -5.40072 | GTAACTCTTGATTTT GCTT ACC AAGC TTTTTTTCCGACAAA rlpA 4414665 - 4415318 + | RlpA ccaA 4415565 - 4416551 + | CcaA HRM2_39270 4417445 - 4416864 - | hypothetical protein HRM2_39280 4419141 - 4417483 - | hypothetical protein TERM 4938 4417638 - 4417651 + g 79 -6.7 -4.61873 | TTAGATCAACCGCAT TGACC CACT GGTCA TTTTCATTTCTGGCG TERM 4939 4418396 - 4418380 - G 86 -12.3 -3.86015 | GAGGCTGGTGATAAA CTGGTCC CTG GGACCAG GATTGGAGGTAAGGC TERM 4940 4419688 - 4419667 - H 84 -10.9 -3.6215 | gap 1, opp_overlap 4419669 TTAAGGGATTTGAAA CATG-GCCCG AAC CGGGCACATG GTTGGAAAAAGAAAA HRM2_39290 4419756 - 4420202 + | hypothetical protein HRM2_39300 4422050 - 4420191 - | hypothetical protein TERM 4941 4420924 - 4420951 + g 70 -2.6 -5.00616 | GATTCAATACCGATC TGGATCTTGCTG ACGC CGGCAGCACCCA TTTTTTCCAGCACCC truA2 4422871 - 4422098 - | TruA2 TERM 4942 4422775 - 4422789 + g 71 -5.6 -4.56775 | CAACTGTTTTTTCAA CCATGG CCT CCACGG TTTTTAGCCCCGGCT HRM2_39320 4423413 - 4422892 - | TPR domain family protein TERM 4943 4423880 - 4423895 + H 71 -4.7 -4.62783 | overlap 4423888 4423894 AGCACATTATCAGCT TCAGC AAAGCG GCTGA TTTTTCGAATAAATC TERM 4944 4424019 - 4424049 + G 87 -9.8 -4.33182 | CTGACAACTTTTTTC CGCCTCTCATATGA ATT TCATATGACAGACG TTGTTTTGTCCATCC HRM2_39330 4423947 - 4424099 + | hypothetical protein HRM2_39340 4424222 - 4424380 + | hypothetical protein TERM 4945 4424409 - 4424397 - f 78 -10.5 -3.28791 | ATTTGTTTTTTATAA CCGGC ACG GCCGG AGCGAGGGATGGCAT TERM 4946 4424819 - 4424843 + G 76 -2.7 -5.08169 | overlap 4424820 4424841 ATGTCCTGTCGGTAT GGCATCAGCAG GGA CTGTTGGAGCG TTTTTTGCGCTGTGT HRM2_39350 4424631 - 4424975 + | hypothetical protein fadL 4426322 - 4425021 - | FadL HRM2_39370 4426842 - 4427798 + | hypothetical protein HRM2_39380 4428097 - 4429617 + | hypothetical protein TERM 4947 4429599 - 4429617 + F 78 -2.4 -5.44119 | opp_overlap 4429615 TGAATTAGCAAAGAG TTATGATG AAA CAGCATGA TTTTTTTGCCATAAA TERM 4948 4430087 - 4430075 - g 77 -9.1 -4.04927 | opp_overlap 4430074 4430075 TGAATTATTAAACAA TGCCG ATG CGGCA CTTTATAAGGCAAAA HRM2_39390 4429746 - 4430159 + | two-component response regulator (GGDEF domain family protein) HRM2_39400 4430584 - 4430396 - | hypothetical protein TERM 4949 4430505 - 4430495 - G 79 -8.2 -4.4084 | AACTAGACAGGAAAA GGGC AAG GCCC GTGTCCGCCTCAAAT TERM 4950 4430702 - 4430714 + H 80 -10.5 -3.49475 | GAGCCATACCTCGCT CCGGC CGT GCCGG TTATATGGGAATAAC HRM2_39410 4430719 - 4430892 + | hypothetical protein TERM 4951 4433176 - 4433158 - g 76 -7.4 -4.30576 | GGTGGAGGATGAAAA GGCCATCC TGA AGATGACC AAGATAATGCTTGAA HRM2_39420 4431023 - 4433500 + | two-component sensory box histidine kinase/response regulator TERM 4952 4433809 - 4433839 + G 76 -7.6 -4.33182 | CTGACAAGTTTTTTC CGCCTCTCATATGA ATT TCATGTGACAGACG TTGTTTTGTCCATCC HRM2_39430 4433734 - 4434057 + | hypothetical protein TERM 4953 4434529 - 4434556 + G 74 -12 -2.73124 | opp_overlap 4434528, overlap 4434528 TTTAAATGGGAAGAC TTGGGCGACCTT TCCG AGGGGCGCCCAA ATTTGGGAACTGAAA HRM2_39440 4434496 - 4435029 + | hypothetical protein TERM 4954 4435906 - 4435937 + G 82 -6.6 -4.87626 | gap 1, opp_overlap 4435910 4435911, overlap 4435911 TGAGATAAAAAGAGC GAAAC-GTTACAGGG TAG CCCTGTCACTGATTC TTTTTGATATTGACC TERM 4955 4435911 - 4435931 + G 70 -9.7 -3.19331 | opp_overlap 4435911 4435910, overlap 4435906 TAAAAAGAGCGAAAC GTTACAGGG TAG CCCTGTCAC TGATTCTTTTTGATA TERM 4956 4436199 - 4436181 - g 83 -3 -5.41143 | opp_overlap 4436184, overlap 4436182 CAGCCCCCAAAAAAA TCACCGTA AGC TTCGGTGT TGCAACCTTTCGAAG HRM2_39450 4435016 - 4436308 + | GGDEF domain family protein HRM2_39460 4436845 - 4437069 + | hypothetical protein TERM 4957 4437707 - 4437687 - g 71 -11.1 -2.8547 | opp_overlap 4437686 AGCCCTGAGAGTATA GGCCAAGGG GCA CCCTCAGCC GGATTTTTGAGCTAA HRM2_39470 4437357 - 4437722 + | hypothetical protein TERM 4958 4437746 - 4437772 + T 100 -5.1 -6.15828 | overlap 4437748 4437750 AATTTTTTAGAAAAT CTTGCCTGCAT CGGCT ATGCGGGTATG TTTTTTTTTGCTACC TERM 4959 4437748 - 4437770 + T 77 -6.3 -4.72643 | overlap 4437746 4437750 TTTTTTAGAAAATCT TGCCTGCAT CGGCT ATGCGGGTA TGTTTTTTTTTGCTA HRM2_39480 4439177 - 4437879 - | transposase (IS4 family protein) TERM 4960 4438537 - 4438525 - G 83 -3.3 -5.52384 | GCTCCATCAAAAAAA GCGCT ATC AGCTC GAACAAATACTTTCC TERM 4961 4439121 - 4439139 + g 80 -2.3 -5.47821 | GCCAAGATTGATCAG CCCTGCG TTGCC CGTAAGG TTTTTTTCAGTAAAT HRM2_39490 4441030 - 4440080 - | transposase (IS66 family protein) TERM 4962 4440147 - 4440173 + g 71 -7.2 -4.07568 | opp_overlap 4440147 AACAAGGCTTTATAA TCTGCCTCAGTC ATG GCCTGGGGAAGA TTTTCAAAAAGGAAG TERM 4963 4440941 - 4440953 + g 76 -6.3 -4.74706 | CTGGATTAATGGTCC CGAAA GGA TTTCG TTTTTAAGTATTGCA TERM 4964 4441102 - 4441085 - R 82 -8.5 -4.35483 | CCTGATGACAAGAAA CAGTATG GGGT CATACTG AAGATTATAAGTTTT HRM2_39500 4442053 - 4441292 - | transposase (IS21 family protein) istA2 4443549 - 4442050 - | IstA2 TERM 4965 4442107 - 4442121 + g 73 -5.6 -4.61868 | overlap 4442111 TGCTGGTAAGCGCTC CCACTG AAC CAGGGG TTTTATCTCTGCCTC HRM2_39520 4444344 - 4443679 - | transposase (IS66 family protein) HRM2_39530 4444742 - 4444389 - | transposase (IS66 family protein) HRM2_39540 4445089 - 4444742 - | hypothetical protein HRM2_39550 4445205 - 4445903 + | acetamidase/formamidase family protein TERM 4966 4445918 - 4445945 + F 88 -9.2 -4.39329 | gap 1, opp_overlap 4445918 4445916 AGCTAATGGTAAAGA GACCTCCGGG-AG CTA CTGCTTGGAGGTC TTTCTTATGTCAGAT TERM 4967 4446053 - 4446095 + F 100 -13.7 -2.90392 | gap 1, opp_overlap 4446063, overlap 4446061 4446063 4446065 CTCCTCCTTCTCAAT CCATTAACAACTTTCGGTTC AAAT GAACCGAATG-TGTTAGTGG TGTCATTAGCAGGTA TERM 4968 4446063 - 4446086 + F 72 -9.6 -3.19117 | opp_overlap 4446063, overlap 4446061 4446053 4446065 TCAATCCATTAACAA CTTTCGGTTC AAAT GAACCGAATG TGTTAGTGGTGTCAT TERM 4969 4446086 - 4446063 - f 81 -9.6 -3.75105 | opp_overlap 4446061 4446053 4446063 4446065 TCAATCCATTAACAA CTTTCGGTTC AAAT GAACCGAATG TGTTAGTGGTGTCAT TERM 4970 4446065 - 4446084 + F 79 -10.8 -3.15407 | opp_overlap 4446063, overlap 4446063 4446061 4446053 AATCCATTAACAACT TTCGGTTC AAAT GAACCGAA TGTGTTAGTGGTGTC TERM 4971 4446184 - 4446222 + F 100 -18.4 -4.39329 | opp_overlap 4446186 4446188 4446190 4446207, overlap 4446186 GATTTTCTATTGACA TACATAGCCTGCTATGCA ATA TACATAGCAGGCTATGTG TTTATTGTGTGAAAT TERM 4972 4446186 - 4446220 + F 100 -18.8 -3.79864 | opp_overlap 4446186 4446188 4446190 4446207, overlap 4446184 TTTTCTATTGACATA CATAGCCTGCTATGCA ATA TACATAGCAGGCTATG TGTTTATTGTGTGAA TERM 4973 4446220 - 4446186 - f 100 -21 -2.91264 | opp_overlap 4446186 4446184, overlap 4446188 4446190 4446207 TTTTCTATTGACATA CATAGCCTGCTATGCA ATA TACATAGCAGGCTATG TGTTTATTGTGTGAA TERM 4974 4446218 - 4446188 - f 100 -17.8 -3.0094 | opp_overlap 4446186 4446184, overlap 4446186 4446190 4446207 TTCTATTGACATACA TAGCCTGCTATGCA ATA TACATAGCAGGCTA TGTGTTTATTGTGTG TERM 4975 4446216 - 4446190 - f 100 -16 -3.05993 | opp_overlap 4446186 4446184, overlap 4446188 4446186 4446207 CTATTGACATACATA GCCTGCTATGCA ATA TACATAGCAGGC TATGTGTTTATTGTG HRM2_39560 4446267 - 4446716 + | HTH-type transcriptional regulator (MArR family protein) HRM2_39570 4446719 - 4446967 + | ferredoxin (Fe-4S iron-sulfur cluster binding protein) TERM 4976 4448168 - 4448110 - g 74 -9.9 -3.53531 | gap 2, opp_overlap 4448131, overlap 4448102 TTATCAACAGGATAA TTTC-ATGACCCCGACAATGAC-TGGTCA CCT TGACCATGTCATCACCAGAGTCATCGTAA AAAGTGATGCAGCAA HRM2_39580 4447010 - 4448302 + | hypothetical protein HRM2_39590 4448816 - 4448613 - | putative methionine aminopeptidase TERM 4977 4448690 - 4448708 + g 91 -4.6 -5.63645 | overlap 4448663 CCTTGAAGTAACGCT TGTCCTTT AAT AAATGACA TTTTTTGTATTTTGA TERM 4978 4448811 - 4448799 - G 76 -3.3 -5.19212 | overlap 4448801 ATTATTATTAAAAAA CCGAC TGA GCCAG CCCATAGAAGATGCT TERM 4979 4448816 - 4448830 + g 73 -2.8 -5.04987 | GACTGAGCCAGCCCA TAGAAG ATG CTCCTA TTTTTTACGAATATT HRM2_39600 4450256 - 4448895 - | DNA deoxyribo-dipyrimidine photolyase family protein TERM 4980 4449850 - 4449863 + g 70 -2.3 -4.95155 | opp_overlap 4449851, overlap 4449851 GTTTCGACCTGAACA ACAGG GCAG CCTGA TTTTTCTGCTATGGC TERM 4981 4450294 - 4450282 - R 75 -5.5 -4.82901 | GCTCCTTTAGAAAAA CCATC TCC GACGG CTGCAGCAACCCATT HRM2_39610 4451241 - 4450612 - | hypothetical protein TERM 4982 4451279 - 4451306 + r 83 -9.2 -3.95022 | gap 1, opp_overlap 4451281 4451283, overlap 4451282 4451283 4451285 ACCTTTTGAATAAAA AAGACAGAGCCTC CAA GAGGCTCTG-CTG TTTCATATTCCTGGC TERM 4983 4451304 - 4451281 - R 100 -11.8 -5.4505 | gap 1, opp_overlap 4451279 4451282 4451283 4451285, overlap 4451283 CTTTTGAATAAAAAA GACAGAGCCTC CAA GAGGCTCTG-C TGTTTCATATTCCTG TERM 4984 4451282 - 4451304 + r 91 -12 -3.56155 | opp_overlap 4451281 4451283, overlap 4451279 4451283 4451285 TTTTGAATAAAAAAG ACAGAGCCTC CAA GAGGCTCTGC TGTTTCATATTCCTG TERM 4985 4451283 - 4451303 + r 100 -15.5 -2.7297 | opp_overlap 4451281 4451283, overlap 4451282 4451279 4451285 TTTGAATAAAAAAGA CAGAGCCTC CAA GAGGCTCTG CTGTTTCATATTCCT TERM 4986 4451303 - 4451283 - R 100 -15.5 -4.36592 | opp_overlap 4451283 4451282 4451279 4451285, overlap 4451281 TTTGAATAAAAAAGA CAGAGCCTC CAA GAGGCTCTG CTGTTTCATATTCCT TERM 4987 4451285 - 4451301 + r 89 -12.3 -2.9003 | opp_overlap 4451283 4451281, overlap 4451283 4451282 4451279 TGAATAAAAAAGACA GAGCCTC CAA GAGGCTC TGCTGTTTCATATTC HRM2_39620 4452166 - 4451654 - | hypothetical protein HRM2_39630 4452924 - 4452166 - | hypothetical protein TERM 4988 4452498 - 4452484 - G 85 -7.8 -4.82901 | CTCCCGGGACAAAAA GGACTG AAT CAGCCC CATGATCAGGATGAC TERM 4989 4453116 - 4453141 + r 86 -7.6 -4.63993 | opp_overlap 4453103 4453102, overlap 4453119 AGGGGCAGAGCTTCC GAAGTTAGGC CGCTCT GCCTAACTCC TTCTTTTTTGACGTT HRM2_39640 4454487 - 4453120 - | transposase (IS605 family protein) TERM 4990 4453716 - 4453734 + g 86 -3 -5.56264 | TTTTATTTTTAGTCC GGTTTCTG CGC CTGGAGCC TTTTTTCTGTTTGGA TERM 4991 4454107 - 4454096 - G 82 -7.2 -4.69214 | opp_overlap 4454096 GAGCCAATAAACAAA CGGG TTAC CCCG TCTTCACATTTTTCG HRM2_39650 4454705 - 4455037 + | transposase (IS200 family protein) TERM 4992 4455225 - 4455215 - f 100 -8.2 -4.91852 | GCCAGCAAAAAGAAA GGCG ATA CGCC CAATGGAGAAATAAA TERM 4993 4455831 - 4455814 - g 70 -4.2 -4.652 | AAAGGATCCCAAAAA CATTGA ATTTGA TCAATG GCTGGTAAAAACTAT ligB 4455245 - 4456048 + | LigB recQ1 4459211 - 4456089 - | RecQ1 TERM 4994 4457563 - 4457545 - G 80 -4.4 -5.19879 | overlap 4457547 4457549 TGGGAAACACAAAAA CAGATGCC CCG GGCAGCGG AAACATCCAGCAGAA TERM 4995 4459912 - 4459894 - R 78 -2.4 -5.44119 | opp_overlap 4459866 TTTATGGCAAAAAAA TCATGCTG TTT CATCATAA CTCTTTGCTAATTCA HRM2_39680 4461414 - 4459894 - | hypothetical protein HRM2_39690 4461580 - 4461759 + | hypothetical protein HRM2_39700 4462220 - 4462744 + | hypothetical protein TERM 4996 4462845 - 4462861 + F 70 -9.4 -2.82595 | opp_overlap 4462844 4462843, overlap 4462844 4462847 TCAACAACTCAAATC CACCGG GCGAG CCGGTG ATTTAGGTGGTTGGG HRM2_39710 4462899 - 4463651 + | hypothetical protein TERM 4997 4463729 - 4463676 - f 86 -12.6 -2.52795 | overlap 4463712 AATCGTTGCAAGGGA CGTTTGACCCGCTGCCCATTTTTG TTACCG CAAAAACAGGCATCGCCTCAAACG CCCCTGAACTCAGAC HRM2_39720 4463765 - 4464346 + | hypothetical protein HRM2_39730 4464758 - 4465105 + | hypothetical protein TERM 4998 4465461 - 4465481 + G 74 -4.8 -4.87892 | TGAGGGTAAATTCAG TGATCAAG AGATA CTTGATTA TTTGTTTTCTTCAGC HRM2_39740 4465108 - 4466163 + | hypothetical protein TERM 4999 4466352 - 4466309 - g 83 -12.7 -3.61517 | gap 2, opp_overlap 4466306, overlap 4466333 ATGGGTTTCCAACAA TGCTCTTGCTACGGGTCGCAA AAAG CTGCGAC-CGCAG-AAGAGCA AGGTTATCTACTTTA TERM 5000 4466556 - 4466531 - g 70 -10.5 -2.90955 | overlap 4466530 4466533 GCAAATATGAAGAAG CAGAACCCCTT TATC AAAGGGCTCTG AAGATCTTAAAGGCC HRM2_39750 4466308 - 4466649 + | hypothetical protein TERM 5001 4467019 - 4467008 - f 85 -2.2 -5.80364 | AGCTGAACAAAAAAA CACG ATAT CATG ACACTGCCTCAATAA TERM 5002 4467524 - 4467514 - g 82 -6.8 -4.83615 | CATGCTGGATAAAAA GGTG TAT CACC TGATAAAAAATGTTA HRM2_39760 4467359 - 4468132 + | hypothetical protein TERM 5003 4468858 - 4468802 - g 84 -13.6 -3.36515 | gap 1 CCTGATTCTGAAATA CCGCCGCCGCTTCCAGCGCCCCACCCT ATTC AGGAACGGGCCCTGGAAGCC-CTGCGG GACAGCCGGAACAAC TERM 5004 4468947 - 4468967 + G 78 -4 -5.06414 | gap 1, opp_overlap 4468951, overlap 4468928 4468949 4468951 TTTTTGATATTCTAA GGA-ACGGC TTTG GCCGTGTTC TTTTTGTTGCCCACA TERM 5005 4468949 - 4468964 + G 70 -4.6 -4.63592 | opp_overlap 4468951, overlap 4468928 4468947 4468951 TTTGATATTCTAAGG AACGGC TTTG GCCGTG TTCTTTTTGTTGCCC TERM 5006 4470543 - 4470529 - g 76 -4.2 -4.96848 | GTTTGTATACAAAAA TCCGGT GGC ACCTGA AGCCCAGGAATTGTT hsdR3 4468235 - 4471465 + | HsdR3 HRM2_39780 4472225 - 4471476 - | hypothetical protein HRM2_39790 4472888 - 4472256 - | type II restriction-modification system, methylation subunit HRM2_39800 4473182 - 4473892 + | hypothetical protein TERM 5007 4473922 - 4473935 + F 70 -3.9 -4.8543 | AGGCCAGAAGATACC TTTGA TTAT TCAAA TTTTTGTACCCATTG HRM2_39810 4474133 - 4474819 + | hypothetical protein HRM2_39820 4474788 - 4475090 + | hypothetical protein HRM2_39830 4475101 - 4475583 + | hypothetical protein TERM 5008 4476761 - 4476793 + G 73 -10.5 -3.29144 | opp_overlap 4476754, overlap 4476754 4476751 4476762 4476766 GTATTCAAGGGGCTG GCCTATGGCCAGGGC CAT GTTCTGGCCATTGGG TTGTGCCGGGCGTCC TERM 5009 4476762 - 4476792 + G 81 -14 -2.57344 | opp_overlap 4476754, overlap 4476754 4476751 4476761 4476766 TATTCAAGGGGCTGG CCTATGGCCAGGGC CAT GTTCTGGCCATTGG GTTGTGCCGGGCGTC TERM 5010 4476766 - 4476788 + G 79 -12 -3.23274 | opp_overlap 4476754, overlap 4476754 4476751 4476762 4476761 CAAGGGGCTGGCCTA TGGCCAGGGC CAT GTTCTGGCCA TTGGGTTGTGCCGGG HRM2_39840 4475609 - 4477138 + | Ferredoxin-dependent glutamate synthase TERM 5011 4477214 - 4477190 - T 100 -17.2 -3.2918 | opp_overlap 4477186 4477182 4477181 4477178 4477177 ATACAGCCAGATCAA GACGGCCCAC GGGCA GTGGGCCGTC GATGCTGATTGATTT mcp 4479258 - 4477228 - | Mcp TERM 5012 4478795 - 4478811 + g 80 -4.3 -5.14477 | overlap 4478796 CCCTTTGAAGATTCC TCCATGG TGA CCAGGGG TTTTTTAGATCTCTG TERM 5013 4479091 - 4479112 + g 71 -5.1 -4.49088 | TTTCGCCTTTACTGT GCTGTCAAG GGCA TTGGACAGC TGTTTTTTTGCTTTG TERM 5014 4479319 - 4479307 - R 70 -3.5 -4.81863 | AAATCCAGAACAAAA TTTTT ACA AAAAA ATCGTGGGCCAAAAA HRM2_39860 4479793 - 4479509 - | hypothetical protein smuG 4480754 - 4480026 - | SmuG HRM2_39880 4480991 - 4480812 - | hypothetical protein HRM2_39890 4481995 - 4480979 - | two-component fusion protein (N:nitroreductase family protein-C:ferredoxin domain) TERM 5015 4482076 - 4482106 + r 73 -7.5 -4.09511 | opp_overlap 4482093, overlap 4482079 4482100 GCCGGCGTCTTTATT GAATCTGGCCCTG AAAAC CCGGTCCGGATTC TTTTCAGAAGCTGTT fabG8 4482944 - 4482165 - | FabG8 TERM 5016 4482550 - 4482562 + g 79 -7.7 -4.56597 | opp_overlap 4482545, overlap 4482546 ATGGAAATGATCCGG GAACC GGT GGTTC TTTTTAACAACGGCA atoB4 4484272 - 4483034 - | AtoB4 TERM 5017 4483896 - 4483908 + g 82 -4.1 -5.35224 | CAGGCGGCATAGGCG CCAAG GGA TTTGG TTTTATTTTTATCCG acd13 4485549 - 4484305 - | Acd13 caiC1 4486482 - 4485586 - | CaiC1 TERM 5018 4485964 - 4485952 - G 80 -3.4 -5.22039 | TCGAAAGTCAAAAAA GAAC CATCC GTTC TCGTCCCGATGCCCC TERM 5019 4486777 - 4486746 - R 100 -11.1 -5.27938 | gap 1, opp_overlap 4486743 4486748 4486750 AGTTGTAAACAAAAA TAGACCATT-CGCT AAAAA AGCGTAATGGTCTA TCCTGATTTAATTAT TERM 5020 4486748 - 4486775 + r 71 -9.3 -2.90456 | gap 1, opp_overlap 4486746, overlap 4486743 4486750 TTGTAAACAAAAATA GACCATT-CGCT AAAAA AGCGTAATGGTC TATCCTGATTTAATT HRM2_39940 4487649 - 4486903 - | hypothetical protein HRM2_39950 4489261 - 4487573 - | hypothetical protein TERM 5021 4487827 - 4487843 + gr 91 -5.1 -5.40474 | GCTCCAAAAAGTCGA TGATCTG GTC CAGTTCA TTTTTTTCCGGCAAT TERM 5022 4489105 - 4489119 + gr 86 -5.6 -5.28683 | opp_overlap 4489096 CAAGTAGGAGTGGCC CCGGAA TAA TGCCGG TTTTTTGATATTGAT HRM2_39960 4489829 - 4489248 - | hypothetical protein TERM 5023 4489615 - 4489598 - G 70 -9.9 -3.28924 | opp_overlap 4489597 4489596 CATTGCTGGGGAGAA TGTCTCC AATT GGAGACA AATTGCTGATAACCT dnaG11 4490200 - 4489829 - | DnaG11 HRM2_39980 4490899 - 4490501 - | hypothetical protein caiC2 4491775 - 4491089 - | CaiC2 TERM 5024 4491177 - 4491149 - G 74 -9.7 -3.64703 | gap 1, overlap 4491152 TTCGTTGTATTGAAA CACCCCTTTGGC CAGCAT GCCAAAG-GGTG CAAGACGGCTGTTCT TERM 5025 4491175 - 4491152 - G 76 -12.5 -2.64144 | overlap 4491149 GTTGTATTGAAACAC CCCTTTGGC CAGCAT GCCAAAGGG TGCAAGACGGCTGTT HRM2_40000 4492364 - 4491972 - | hypothetical protein TERM 5026 4492235 - 4492220 - G 72 -4 -4.83615 | gap 1 CAGGGGTGATAAAAA GATACCC CTT GGG-ATC ACTGACAACAAATTT TERM 5027 4492983 - 4493025 + G 80 -3.4 -5.26119 | opp_overlap 4493007 CGACCGGATTGGTGA CAGGCGCTCCCGGG-CCATG ATCAA CCTGCATCTGGGA-CGCCTG TTTTATTTTTCCGAG TERM 5028 4494100 - 4494111 + G 73 -5.8 -4.58395 | opp_overlap 4494100 4494109 ACCCACACGGTCAAA GCGA CCAA TCGC TTTTTAGGCGCTGAG TERM 5029 4494326 - 4494316 - g 74 -6.8 -4.36914 | opp_overlap 4494318 4494319, overlap 4494317 4494320 GTTGGCCGGACAAAA GCCA TGC TGGC CGTCCCCTTTGAAGT TERM 5030 4494358 - 4494320 - g 71 -11 -2.80077 | opp_overlap 4494319 4494318, overlap 4494316 4494317 GCCGGACAAAAGCCA TGCTGGCCGTCCCCTT TGAAGTT AAGGGGACGGCCAAGG GAATTCTGTACCACG TERM 5031 4495283 - 4495272 - g 70 -2.2 -4.96773 | TGAATTAAAAACAAA GAAC AACA GCTC CCATCCCGATGACTT HRM2_40010 4492693 - 4495461 + | putative transcriptional activator TERM 5032 4495524 - 4495512 - f 76 -10.5 -3.05463 | ATCTCCCCCATTTAA CCGGC ATG GCCGG AAAGCCCTCACTCCT HRM2_40020 4495703 - 4496041 + | Lambda repressor-like DNA-binding family protein HRM2_40030 4497302 - 4496115 - | permease of the major facilitator superfamily cinA 4497280 - 4498257 + | CinA TERM 5033 4498393 - 4498377 - fH 100 -10.1 -5.63236 | opp_overlap 4498376 AGGGAAAAAGAAAAA CCGGGCT GGG AACCCGG GTGAATTCAATCCAG TERM 5034 4498410 - 4498425 + FH 78 -4 -5.0925 | gap 1, opp_overlap 4498413 TGAATTCAATCCAGA CAATGGC ATG GCC-TTG TTTTTGATTTTACCG TERM 5035 4500152 - 4500138 - g 70 -2.8 -4.85599 | CGTAGTCCATAAAAA TTCAAC CCA GATGAA ACTCATGGGAGATTT atoS3 4498600 - 4501140 + | AtoS3 HRM2_40060 4501169 - 4501552 + | sigma-54 dependent DNA-binding response regulator caiC3 4503414 - 4501690 - | CaiC3 TERM 5036 4502767 - 4502757 - G 80 -2.4 -5.45726 | CATAGCCGAAAAAAA CCGG ACC CAGG ATGTCGCAGACCAGA HRM2_40080 4503814 - 4505334 + | hypothetical protein TERM 5037 4505316 - 4505334 + T 78 -2.4 -5.44119 | opp_overlap 4505332 TGAATTAGCAAAGAG TTATGATG AAA CAGCATGA TTTTTTTGCCATAAA arcD 4508450 - 4505403 - | ArcD TERM 5038 4506818 - 4506804 - G 90 -8.6 -5.02476 | opp_overlap 4506809 AGAGTTGGGAAAAAA TTCGTG TTC CACGAA CTTGAATGCATATAT TERM 5039 4507633 - 4507660 + g 100 -10.5 -4.64766 | AAGAACATTTTGGGA TCGGGCGGGTC AACGTA GGCCCGCCGGA TTTTTGCCATATCAC arcE 4509553 - 4508447 - | ArcE TERM 5040 4509439 - 4509456 + g 83 -3.3 -5.40474 | overlap 4509441 CCAGGGGAGGAAGGG CAGGTGC CACT GCATCGG TTTTTTTCAGGGGAT mdtP1 4510981 - 4509560 - | MdtP1 TERM 5041 4509988 - 4509968 - GR 83 -11.1 -3.57144 | GTTTTCAGGTTCAAA CTTGTGGGC GCT GCCCACCAG GGCCACGGTGGGCAG TERM 5042 4510408 - 4510437 + gr 73 -7.1 -4.15565 | gap 1, opp_overlap 4510390 4510401, overlap 4510410 4510411 TGAAATATGCCTTTT TAACGG-CCAGGGC CAG GTCCTGGTCCGCTG TTTTCAGGTCATGCC TERM 5043 4510411 - 4510434 + gr 77 -11 -2.80098 | gap 1, opp_overlap 4510390 4510401, overlap 4510410 4510408 AATATGCCTTTTTAA CGG-CCAGGGC CAG GTCCTGGTCCG CTGTTTTCAGGTCAT HRM2_40120 4513727 - 4510926 - | hypothetical protein HRM2_40130 4514292 - 4513717 - | hypothetical protein TERM 5044 4514306 - 4514334 + r 72 -8.1 -3.85891 | opp_overlap 4514312, overlap 4514299 4514307 ATTTTCCACCTTTAT ACTGAACCCATGG ATC CCATGGGTTGGGG TTTGATAGGTTTTTG TERM 5045 4514307 - 4514333 + r 83 -11.6 -2.9045 | opp_overlap 4514312, overlap 4514306 4514299 TTTTCCACCTTTATA CTGAACCCATGG ATC CCATGGGTTGGG GTTTGATAGGTTTTT HRM2_40140 4515523 - 4514285 - | hypothetical protein TERM 5046 4514328 - 4514312 - G 77 -12.3 -3.12668 | opp_overlap 4514307 4514306 4514299 CACCTTTATACTGAA CCCATGG ATC CCATGGG TTGGGGTTTGATAGG TERM 5047 4514398 - 4514437 + g 74 -11.6 -3.06133 | opp_overlap 4514398 TCATCATCAGAAGAA CGATGTCCAGAATTTTTC CAGT GGAAAATTCCGGGTATCG TTGAATGGCCCATTG TERM 5048 4514437 - 4514398 - G 72 -8 -3.85864 | gap 1, opp_overlap 4514398 TCATCATCAGAAGAA CGATGTCCAGAATTTTTCC AGT GGAAAA-TTCCGGGTATCG TTGAATGGCCCATTG uspA5 4516670 - 4515567 - | UspA5 TERM 5049 4515655 - 4515636 - GR 77 -6.4 -4.72272 | CCGGCCGATGAAAAA GGCCTCCA CCCT TGAAAGCC CCCGTCGCCCGACAA mdtP2 4518078 - 4516618 - | MdtP2 TERM 5050 4517126 - 4517109 - GR 76 -6.9 -4.57837 | AGATGCGGGGAAAAA GTGTGGC CCGG GCCGCAC CGATAAAGGCATTGG TERM 5051 4518053 - 4518043 - GR 75 -8.2 -3.74345 | AGTCAGACATCTAAA GGCC ATG GGCC GCAATGTGAAGTTGA acrB 4521263 - 4518075 - | AcrB TERM 5052 4519390 - 4519366 - G 71 -11.4 -2.72511 | opp_overlap 4519346, overlap 4519365 TTGAGTTTGGCAAAC CCCAGGGCCA TGTTC TGGCCCTGGC CCCCGAAACTGATAC arcA 4522645 - 4521263 - | ArcA TERM 5053 4523338 - 4523378 + G 73 -5.3 -4.59511 | overlap 4523342 4523348 AGACTAAAAATCCTC CAGCCGGTAACGGCACTGA CCC TGGGTGCCGTTATCATCAG TTTTTCAAGCGTGTT TERM 5054 4523637 - 4523652 + G 91 -6.8 -5.06414 | CCAGGTGTTTGTACT GACCCT TGCA GGGGTC TTTTTATTCAAGGAA TERM 5055 4523696 - 4523706 + G 71 -6.8 -4.21351 | overlap 4523695 4523697 TCTTTGTTCTGTCCC TGCC CAT GGCA TTTCTTGGGCTGTTT HRM2_40190 4523320 - 4524195 + | permease of the drug/metabolite transporter (DMT) superfamily TERM 5056 4524226 - 4524212 - f 70 -5.8 -4.25104 | TCCGTGTCAGCAAAA TTTACA AGG TGTAAA AAAAATGTTTCACCC HRM2_40200 4524369 - 4524737 + | response regulator receiver protein uspA6 4525323 - 4524862 - | UspA6 uspA7 4525820 - 4525338 - | UspA7 acuB3 4526529 - 4525852 - | AcuB3 TERM 5057 4526143 - 4526156 + g 74 -3.8 -4.93296 | opp_overlap 4526143 AAACGAAACAAGGCA GCGA AAGATA TCGC TTTTTGTGATGATCC TERM 5058 4526635 - 4526625 - R 73 -8.2 -3.62597 | TTTACGCGTGAACAA GCGG CTA CCGC GGGGCTGATATGCCT HRM2_40240 4528129 - 4526699 - | sigma-54 dependent DNA-binding response regulator (NtrC family proten) HRM2_40250 4529597 - 4528107 - | two-component sensory box histidine kinase (N:ATP-binding domain-C:sensory box histidine kinase) TERM 5059 4529637 - 4529648 + r 73 -5.8 -4.57837 | TGAATGACAATTGTC GGGA ATAT TCCC TTTTTAGCACCCTCT HRM2_40260 4531036 - 4529615 - | hypothetical protein TERM 5060 4529707 - 4529717 + g 87 -8.2 -4.82901 | TATACTGATTTTTCT GGGC ATG GCCC TTTTTCTCAGCCCCA TERM 5061 4529753 - 4529742 - G 74 -2.2 -5.08824 | gap 1, overlap 4529743 GCCCCATTGAAAAAA GCGCC GTT GGC-C TCAAGGATGTGAAGA TERM 5062 4529831 - 4529819 - G 73 -3.4 -5.00884 | ATTGCCCTCAAAAAA CATG TTACC CATG GCAAGCCGGGTGTCC TERM 5063 4530089 - 4530049 - G 85 -7.5 -4.89393 | opp_overlap 4530070 TAAACCCGACAAAAA CCATGACCCCAAGATCCGC CTC GATGATCTTGGCCCCATGG GCCGTGACATCGTTA TERM 5064 4530070 - 4530101 + g 76 -11.6 -3.19018 | gap 1, opp_overlap 4530049 CCCCAAGATCCGCCT CGATGATCTTGGCCC CAT GGGCCGTGA-CATCG TTACCTTCAAGTCTT HRM2_40270 4531612 - 4531055 - | hypothetical protein HRM2_40280 4532021 - 4532551 + | hypothetical protein TERM 5065 4532840 - 4532856 + G 70 -8.7 -3.53012 | opp_overlap 4532849 TGCCATCGATCCTCT GGGCAAG CAC TTTGCCC TTTCAAAGGCCGGCA HRM2_40290 4532709 - 4534193 + | Na(+)-dependent di-and tricarboxylate transporter/sulfate-sodium-cotransporter TERM 5066 4534202 - 4534230 + F 81 -11 -3.32536 | opp_overlap 4534204, overlap 4534204 TGGATAAATTAAGAA AAGGGGGCGGAT TTGAC ATCCGTCCCCTA TTATCAAAATCCTTT TERM 5067 4534204 - 4534228 + F 100 -13.6 -3.22653 | opp_overlap 4534204, overlap 4534202 GATAAATTAAGAAAA GGGGGCGGAT TTGAC ATCCGTCCCC TATTATCAAAATCCT TERM 5068 4534228 - 4534204 - f 100 -11.4 -4.87052 | opp_overlap 4534204 4534202 GATAAATTAAGAAAA GGGGGCGGAT TTGAC ATCCGTCCCC TATTATCAAAATCCT HRM2_40300 4534302 - 4535561 + | hypothetical protein TERM 5069 4535597 - 4535576 - T 75 -2.1 -5.25735 | overlap 4535577 GGAAAAAACGAAAAA CCCGGGGCT ACCA AGCCTTGGA ACTCATGATCTTCCT HRM2_40310 4536011 - 4535583 - | sigma-54 dependent two component transcriptional regulator (Fis family protein) TERM 5070 4535654 - 4535664 + g 70 -2.4 -4.98616 | overlap 4535662 CAAGAATCATCTTGT GGGC CTT GGCC TTTTTGATCTTTTCA HRM2_40320 4536729 - 4536070 - | sensory box histidine kinase TERM 5071 4536660 - 4536674 + g 74 -8.6 -4.08767 | overlap 4536656 TTTTGATCTCATGGC TGATGG CAG CCATCA TTTTACCAAAATAGG HRM2_40330 4537112 - 4536750 - | two-component sensory box histidine kinase/response regulator HRM2_40340 4538848 - 4537097 - | periplasmic sensor signal transduction histidine kinase TERM 5072 4537253 - 4537267 + g 91 -7 -5.14563 | overlap 4537254 AAGCCCCAGTCCTGT TCCGCC CTG GGCGGC TTTTTTGGTAAAAAA TERM 5073 4537254 - 4537266 + g 80 -10.5 -3.68256 | overlap 4537253 AGCCCCAGTCCTGTT CCGCC CTG GGCGG CTTTTTTGGTAAAAA TERM 5074 4537926 - 4537906 - G 79 -8.3 -4.40561 | overlap 4537903 TGGTGCCAAAAATAA TCACCCCAA GAA TCAGGGTGA TGCTCAACAGCAGAA TERM 5075 4538568 - 4538550 - G 100 -11.8 -4.78149 | CTCAGAACCGAAAAA TCGTTGTC GTG GACAACGA AATCCAGGGCAGCCT TERM 5076 4538616 - 4538600 - G 85 -3.6 -5.40474 | opp_overlap 4538601, overlap 4538601 ACGCGCTGAAAAAAA TGCGGA AATGG TCCGCT TGGTGTTGGAGACCG TERM 5077 4538913 - 4538943 + r 70 -7.5 -3.87641 | gap 1, overlap 4538902 TCCGTCCCCACGGAT CCCCGG-GGCGGAT TTTC ATCCGCCTCCACGG TTTATACGCCCTGTT HRM2_40350 4540243 - 4538945 - | response regulator receiver domain protein sulP3 4542308 - 4540182 - | SulP3 TERM 5078 4541914 - 4541902 - GR 76 -7.7 -4.11216 | GCGGCATTGGTAAAA CCGTT GAC AACGG GGTGGGACAAAAAAT HRM2_40370 4542928 - 4542344 - | HTH-type transcriptional regulator (MtrR family protein) TERM 5079 4542682 - 4542672 - G 73 -3.2 -5.04597 | AGGTAGAGATAAAAA GAGA TGA TCCC CTCCACAAGATCAAT TERM 5080 4542971 - 4542986 + r 71 -4 -4.79352 | opp_overlap 4542966 4542971 4542968, overlap 4542971 CCCCTAACCAGACTA CTGATT AGTC AGTCAG TTTTATTATCAATAA TERM 5081 4543016 - 4543006 - R 87 -5.4 -5.52023 | ATTATCAATAAAAAA TGAC CGG GTCA ACAAAAAACGGATAC HRM2_40380 4543393 - 4543034 - | two-component system response regulator (Ntr family protein) TERM 5082 4543701 - 4543689 - gH 77 -4.8 -4.9792 | opp_overlap 4543689 CAGTCCAGATAAAAA GGTC TTTCT GACC CTTTTTTTCACCATT TERM 5083 4544690 - 4544656 - gH 100 -13.7 -5.58209 | gap 1 GGAAACTCAAAAAAA GCCATGG-GATCAGTG ATCT CGCTGATCACCATGGC CCACAGCCTCGGCAT TERM 5084 4544794 - 4544805 + G 79 -7.2 -4.44277 | GGTGTTATGGTCGTT GGCG GAAC CGCC TTTTACCTTTTCATG HRM2_40390 4543615 - 4544838 + | permease of the major facilitator superfamily rluC 4544744 - 4545631 + | RluC HRM2_40410 4546394 - 4545624 - | ABC-type transport system, permease component TERM 5085 4546254 - 4546241 - G 93 -8.1 -5.16151 | overlap 4546243 4546251 CAAACTCAAGAAAAA CACCC ACAA GGGTG AGTTGGGCCACCATC HRM2_40420 4547075 - 4546407 - | ABC-type transport system, ATP-binding protein HRM2_40430 4547197 - 4547946 + | hypothetical protein HRM2_40440 4547951 - 4548517 + | hypothetical protein TERM 5086 4548560 - 4548600 + T 74 -4.2 -5.055 | gap 1, opp_overlap 4548560 GGCGTTGCTGCAAAA TTCTGAAACCTCA-TGTAC AGCA GTATACTCCGGTTTCAGAA TTTTTTGCGCCTTGC pepA 4550237 - 4548690 - | PepA HRM2_40460 4550361 - 4551914 + | transposase (IS4 family protein) HRM2_40470 4552188 - 4552421 + | hypothetical protein HRM2_40480 4552517 - 4553416 + | hypothetical protein HRM2_40490 4554220 - 4553492 - | hypothetical protein TERM 5087 4553895 - 4553905 + g 70 -4.6 -4.68512 | GCTGGTGCCTCGACT TCGG CAG CCGG TTCTTTTTCTTCTGC TERM 5088 4553965 - 4553989 + g 73 -5.7 -4.47707 | opp_overlap 4553986, overlap 4553958 4553962 CCTCAACTTCGGCAA CCGGTTCCT TCACTTC AGCAACCGG TTCTTTTTCCTCAAC rapA 4557135 - 4554418 - | RapA TERM 5089 4555099 - 4555086 - G 70 -3.1 -4.8622 | CTGCGGAATTAAAAA CTTCC AGGC GAAAG GTTCGCGCCATGATG TERM 5090 4555599 - 4555585 - G 72 -8.6 -3.92592 | overlap 4555594 ATCCGGAAGATCAAA CATCAC AAG GTGATG GGCAAACTGGAAATT TERM 5091 4556021 - 4556051 + g 79 -11 -3.54653 | opp_overlap 4555997 4556018 4556016 TTCCTGAACACAGCC CGGCCCGGCCCG TGGCTGT CGAGCAGGGCCG TTATCTCCTGGGAAT TERM 5092 4556700 - 4556732 + g 73 -9 -3.73775 | opp_overlap 4556680 4556716 GGGGGATCAGGTCCA CCCGCCCGCCCATG AACCC CATGGCCGGGGAGG TTTCATGGGCGTGCC HRM2_40510 4558095 - 4557247 - | putative serine/threonine protein kinase TERM 5093 4558168 - 4558145 - R 79 -8 -4.3623 | opp_overlap 4558153 4558162, overlap 4558146 ATACTAAAAACCAAA CTGCCCCCCG GGAC CGGGGGGGAT GGACCCGCTTCATAG TERM 5094 4558167 - 4558146 - R 84 -11.5 -3.20111 | opp_overlap 4558153 4558162, overlap 4558145 TACTAAAAACCAAAC TGCCCCCCG GGAC CGGGGGGGA TGGACCCGCTTCATA alaS2 4558710 - 4558273 - | AlaS2 TERM 5095 4559040 - 4559061 + G 73 -2.9 -4.98255 | gap 1 AAGGCCGATGGAACA CTGCAG-GCG AAA CGCTCTCCGG TTTTTGTCATTGAAC TERM 5096 4559651 - 4559662 + G 95 -5.8 -5.41143 | overlap 4559650 ATGCCTTGATGATGG GAGG TTCA CCTC TTTTTTTGAGACATC HRM2_40530 4558881 - 4559897 + | hypothetical protein HRM2_40550 4561682 - 4560270 - | HD-GYP domain family protein TERM 5097 4560547 - 4560569 + g 78 -6.2 -4.75372 | opp_overlap 4560512 4560547 ACAAACGCCTCTAAA TACGGGGGGT AAA ACAACCCGTA TTTTTGATGACTGCT HRM2_40560 4565508 - 4561702 - | sensory box histidine kinase (GGDEF domain protein) TERM 5098 4561774 - 4561750 - G 70 -11.4 -2.52464 | CTCCTTTGCAAGGTA CATGGCCCGG TCAGC CCGGGCAATG AGATCGGCCTCTGAA TERM 5099 4562946 - 4562893 - G 70 -8.9 -3.53224 | gap 1 CAGTTTTTTTTCAAA GAGTGGAATGAAGTCGGC-CACCA TTCCGGC CGGTGCACCGCCCTCATCCCCCTC AAAGGGCATGGCGTC TERM 5100 4563729 - 4563757 + g 100 -12.5 -4.24204 | overlap 4563723 CCTCGTTTCCCACAC GGATTACCTGGTG GTT TACCAGGAAATCC TTTTCACTGTCCGTC pcrA1 4567435 - 4565576 - | PcrA1 algC 4568813 - 4567458 - | AlgC TERM 5101 4567632 - 4567644 + g 73 -5.5 -4.63928 | GCCATCAATGTCAAT GACCT CGT GGGTC TTTTTAAACTGCTCT uppP 4569692 - 4568862 - | UppP TERM 5102 4570335 - 4570311 - g 75 -10.8 -3.42574 | CGAATTCCAGGACAA GGCAAAAACC GTTGG GGTTCTTGCC ACAAAAAACGAGGAT TERM 5103 4570355 - 4570369 + G 77 -11.4 -3.44051 | AAAACGAGGATGTCC GCTCCC TGA GGGAGC TTCTGATCATCGGCC hcp 4569940 - 4571583 + | Hcp HRM2_40610 4571660 - 4572397 + | hypothetical protein TERM 5104 4572784 - 4572755 - g 83 -5.1 -5.20783 | gap 2, overlap 4572758 ATCCAAAGACAAAAA CAGC-GCA-CCTG CATCGT CAGGGTGCGGCTG CCCGTCAGAGACCCT HRM2_40620 4572501 - 4573268 + | ferredoxin (4Fe-4S iron-sulfur cluster binding protein) HRM2_40630 4574000 - 4573323 - | cAMP-bindin transcriptional regulator (Crp/Fnr family protein) ttuD 4575426 - 4574104 - | TtuD TERM 5105 4575475 - 4575487 + r 87 -5.5 -5.44198 | CATCAGAGCTCCAGG CGGTG TGA TACCG TTTTTATTGTTTGTT sfsA 4576242 - 4575508 - | SfsA HRM2_40660 4576940 - 4576239 - | hypothetical protein proC 4577208 - 4578062 + | ProC HRM2_40680 4578633 - 4578145 - | hypothetical protein HRM2_40690 4578868 - 4578611 - | ferredoxin (4Fe-4S iron-sulfur cluster binding protein) HRM2_40700 4579025 - 4578792 - | hypothetical protein TERM 5106 4579351 - 4579362 + G 71 -5.8 -4.36343 | overlap 4579347 TTGCCAATTGTGCAA CAGC AGCG GCTG TTTCTTGCTTGATTG HRM2_40710 4579194 - 4579424 + | hypothetical protein TERM 5107 4579837 - 4579856 + G 90 -5.7 -5.28481 | TTTGGCTCTCTTCTG GCCATTG AGCCCA CGATGGC TTTTTTCCTTGAGTC TERM 5108 4580112 - 4580130 + G 74 -4.4 -4.77438 | overlap 4580113 CCACATGATCCCTTC GGCCCTGG TTC TCGGGGCA TTTTTCATCATGGGT cydA2 4579552 - 4580868 + | CydA2 TERM 5109 4581317 - 4581327 + G 70 -8.2 -3.73775 | TTGCCAATATTTTCA GGGG AAT CCCC TTTGATGCCAATGGC TERM 5110 4581532 - 4581542 + G 91 -5.4 -5.41143 | CTGGCCGTTCTCTTT CTTG TGG CAAG TTTTTTTGCAACCTC TERM 5111 4581642 - 4581656 + G 73 -2.9 -5.0133 | GGGTGTTCGGTATTT TATTG CTAAA CAATA TTTTTTCAGGGCGTG TERM 5112 4581694 - 4581704 + G 86 -6.8 -5.03314 | TCTGCCGTCACCATC GTGG GAG CCAC TTTTTTCGGAATCGC cydB2 4580902 - 4581918 + | CydB2 TERM 5113 4582105 - 4582144 + G 90 -13.5 -3.85698 | overlap 4582106 GGTCACCATTATTTT TGCCGTCTCCCACAGCC TCTACT GGCTGTGGGTTACGGCC TTTATCGGAGCCAAC TERM 5114 4582106 - 4582143 + G 100 -17 -2.91276 | overlap 4582105 GTCACCATTATTTTT GCCGTCTCCCACAGCC TCTACT GGCTGTGGGTTACGGC CTTTATCGGAGCCAA HRM2_40740 4582043 - 4582243 + | putative rhodanese-related sulfurtransferase TERM 5115 4582374 - 4582390 + G 73 -12.3 -2.62613 | overlap 4582373 4582372 CTTTGCCGATCTTCC GGCAGAC TGG GTCTGCC CTGTTTGCGGTGCAG hbr1 4582273 - 4582434 + | Hbr1 TERM 5116 4582501 - 4582448 - T 80 -10.3 -3.55145 | gap 1, opp_overlap 4582459, overlap 4582455 4582459 AAGCAGGAAGGATAA GCATCAATTC-ATGGCCCTGCCCTGA ACA CCAGGGCAGGGCCATTGTTTTACCAC ACCTCAGGATAGCCG TERM 5117 4582493 - 4582455 - T 100 -13.8 -3.31589 | opp_overlap 4582459, overlap 4582448 4582459 AAGGATAAGCATCAA TTCATGGCCCTGCCCTGA ACA CCAGGGCAGGGCCATTGT TTTACCACACCTCAG TERM 5118 4582489 - 4582459 - T 100 -23.4 -2.59035 | opp_overlap 4582459, overlap 4582455 4582448 ATAAGCATCAATTCA TGGCCCTGCCCTGA ACA CCAGGGCAGGGCCA TTGTTTTACCACACC TERM 5119 4582459 - 4582489 + T 100 -22.7 -4.17048 | opp_overlap 4582459 4582455 4582448 ATAAGCATCAATTCA TGGCCCTGCCCTG AACAC CAGGGCAGGGCCA TTGTTTTACCACACC HRM2_40760 4582950 - 4582495 - | hypothetical protein HRM2_40770 4583235 - 4583011 - | hypothetical protein iorB4 4583818 - 4583237 - | IorB4 TERM 5120 4583538 - 4583548 + g 70 -2.4 -5.00884 | GCATCATAGTAGACC AGGG TCC CCCC TTTTTTAGCGGCGGT iorA4 4585746 - 4583818 - | IorA4 TERM 5121 4584541 - 4584559 + g 100 -8.8 -5.26316 | overlap 4584543 ATCCCCTACGGTTAT GTCCGTTG TCT CAACGGCC TTTTTTATGGCATAA TERM 5122 4585170 - 4585144 - G 77 -10 -3.66178 | opp_overlap 4585142 GTTTTCAACGTCAAA CCGGGGCGTATC ATC AAAGCGCCCCGG GGTGTATGGGCCAAA TERM 5123 4585831 - 4585860 + r 78 -7.1 -4.48987 | gap 1, opp_overlap 4585828, overlap 4585832 4585833 AATTTAATACGATCA GC-TGGGGGCGGAT TTT ATCCACCCCCATGG TTTTGATTATGCGGC TERM 5124 4585832 - 4585859 + r 78 -10.6 -3.2891 | gap 1, opp_overlap 4585828, overlap 4585831 4585833 ATTTAATACGATCAG C-TGGGGGCGGAT TTT ATCCACCCCCATG GTTTTGATTATGCGG TERM 5125 4585833 - 4585857 + r 100 -14.3 -3.20455 | opp_overlap 4585828, overlap 4585832 4585831 TTTAATACGATCAGC TGGGGGCGGAT TTT ATCCACCCCCA TGGTTTTGATTATGC HRM2_40800 4586220 - 4585867 - | hypothetical protein HRM2_40810 4587266 - 4586295 - | hypothetical protein TERM 5126 4587161 - 4587149 - G 74 -6.9 -4.36914 | CCTTCCGCCACAAAA GCCGC TTT ACGGC CATGGCACAGGCAAT HRM2_40820 4588361 - 4587276 - | hypothetical protein TERM 5127 4587766 - 4587746 - G 100 -8.3 -6.15717 | TAAATACAAAAAAAA TGATCACCC CGA GGTTGATCA CCCAGAAGCAGACCG TERM 5128 4587894 - 4587882 - G 76 -4.8 -4.95957 | opp_overlap 4587882 4587893 GAAACCAAGGAAAAA GGTG TTGAG CACC AGTTTTTCCATGTGA HRM2_40830 4589782 - 4588367 - | NAD-dependent epimerase/dehydratase family protein TERM 5129 4588409 - 4588399 - G 79 -6.8 -4.7373 | overlap 4588400 4588401 GCACCTTATCAAAAA TGCC CAG GGCA GACCCAAGGGCGTCA TERM 5130 4589603 - 4589613 + g 74 -6.8 -4.28361 | AAGGTTGACTCGAAC CTGG GAG CCAG TTTTAATGCCATTGG TERM 5131 4590243 - 4590256 + G 88 -3.8 -5.62219 | GATCCGCAACACCCC GCTG CTTGTA CAGC TTTTTTTCATCTATT HRM2_40840 4590010 - 4590699 + | ABC-type amino acid transport system, permease component TERM 5132 4590737 - 4590749 + F 72 -7.7 -3.90112 | CCTGACAGCCCTTCC GGGAA TTA TTCCC TTTCATTAACCGCAA TERM 5133 4590931 - 4590944 + G 70 -4.5 -4.67982 | AATGGCGTTTTAAGG GTGGG CATG TCCAC TTTTGTTCCCTGGGC HRM2_40850 4590784 - 4591617 + | ABC-type amino acid transport system, periplasmic amino acid-binding protein TERM 5134 4591930 - 4591971 + G 80 -3.2 -5.243 | overlap 4591955 TGGCAACGGCCTACG TGGAGA-CCATACGCAACAT CCCT GTGAT-CGTATGGATCTTCA TTTTTTACTACTTTC HRM2_40860 4591614 - 4592495 + | ABC-type amino acid transport system, permease protein TERM 5135 4592601 - 4592587 - f 91 -6.4 -5.42259 | GTAGCCTCAAAAAAA TCCCGA AAA TCAGGA CACAAGAATGAAACA HRM2_40870 4592739 - 4593026 + | hypothetical protein HRM2_40880 4593144 - 4593758 + | SH3 domain family protein TERM 5136 4593750 - 4593740 - f 71 -8.2 -3.54741 | TATCACTGCTTTAAA CCGG ATA CCGG CGGGTTAGAGAAACA umuD2 4593861 - 4594280 + | UmuD2 TERM 5137 4595433 - 4595420 - g 70 -8.1 -3.76186 | overlap 4595416 CATGGACAAAATCAA TGCCC GCAT GGGCA GTCACGCTGTCCGGT umuC1 4594284 - 4595552 + | UmuC1 TERM 5138 4595716 - 4595728 + G 79 -5.5 -4.93365 | overlap 4595710 TCAAATAACGCTCCC GCAGG GCT TCTGC TTTTTAGTTCTGAAC HRM2_40910 4595545 - 4595931 + | hypothetical protein TERM 5139 4596453 - 4596442 - g 73 -5.8 -4.56597 | TTGGCTGCTCAAAAA TGCC ACCA GGCA GGAATTGACTGGTCC HRM2_40920 4595956 - 4596870 + | Fe-S oxidoreductase family protein HRM2_40930 4597262 - 4597026 - | hypothetical protein TERM 5140 4597326 - 4597314 - R 78 -10.5 -3.32343 | TCCAGATTCGTATAA CCGGC ATG GCCGG AGCATGGTATCTGCC ubiE5 4598496 - 4597405 - | UbiE5 TERM 5141 4597779 - 4597792 + g 74 -9.5 -3.57883 | TTCTCCTGAATCTTT CCCCG ATAA CGGGG TTTGCGGCATCTTCT TERM 5142 4598154 - 4598126 - G 80 -9.5 -4.07568 | overlap 4598127 TTGCCCGTGGTAAAA CCCTGGGCCACAG CAT CCATGGCGCAGGA GGTCAAAAGGGGAAT TERM 5143 4598153 - 4598127 - G 71 -10.8 -3.04398 | overlap 4598126 TGCCCGTGGTAAAAC CCTGGGCCACAG CAT CCATGGCGCAGG AGGTCAAAAGGGGAA HRM2_40950 4599166 - 4598585 - | peroxiredoxin (AhpC/TSA family protein) resA 4599726 - 4599169 - | ResA TERM 5144 4599743 - 4599788 + r 100 -23.5 -3.95986 | gap 1, overlap 4599744 ACAACACCTCCTTTA ACGGT-CCAGGCCTTTCCCTTG AAT CAAGGGGAAGGCCTGGCACCGG TTTGATTCAATTAAA TERM 5145 4599744 - 4599787 + r 100 -27 -2.97109 | gap 1, overlap 4599743 CAACACCTCCTTTAA CGGT-CCAGGCCTTTCCCTTG AAT CAAGGGGAAGGCCTGGCACCG GTTTGATTCAATTAA fdhB7 4600512 - 4599799 - | FdhB7 TERM 5146 4600234 - 4600216 - G 71 -10.2 -3.0353 | opp_overlap 4600215, overlap 4600215 CTCGGTATAAATAAT GGCTCCGG TAT CCGGATCC CTGTATATGGCGTCA fdhA7 4603615 - 4600526 - | FdhA7 TERM 5147 4602437 - 4602460 + g 73 -3.2 -5.03314 | gap 1, overlap 4602414 GCCCGTGGCAGCATA GGTCTCGT-AC ACC GTCATGAGATC TTTTTTCGGAGTACC TERM 5148 4603023 - 4603007 - G 70 -8.7 -3.57144 | TGCGCCACGTCCAAA CGACTCT GCC AGAGCCG CTACGGTTGCGCTAT TERM 5149 4603882 - 4603848 - g 91 -4.8 -5.66229 | opp_overlap 4603873, overlap 4603852 ATGAATAATAAAAAA CTACGGCTGGTCTCGT GGA ACGTGAACGGCCTCAG GGCCGCTGTTAAAAA TERM 5150 4603912 - 4603899 - g 74 -3.9 -5.00616 | GCCGCTGTTAAAAAA GATTT CTTG AAATC CATGGAACAGCTTGA TERM 5151 4604580 - 4604616 + G 85 -12.9 -3.68827 | GACAACGATATCCTG GGGTCGGACCACTGCCC CGT GGGCATTGAACTGACCC TTTAAATCATACCTG exoA 4603833 - 4604621 + | ExoA TERM 5152 4605784 - 4605768 - g 76 -12.3 -2.8789 | overlap 4605760 GGAAAGACCATCATA TCCACGG GAA CCGTGGA TGACAGGGGGAAAAT TERM 5153 4606087 - 4606113 + G 100 -16.7 -3.66288 | opp_overlap 4606077 AATTACCCATGATTC CCGTTGTGGAG ATGAC CTCCACAACGG TTGTATTAAAGGATC HRM2_41000 4604646 - 4606136 + | putative multiheme cytochrome family protein TERM 5154 4606181 - 4606140 - T 79 -6.6 -4.7173 | gap 1, opp_overlap 4606143 4606148, overlap 4606141 4606143 GATCAGATTTAAAAA TTACCGATTGGGGACAGGT TCAAC ACCTGTCCCCA-TGGGTTT TGGTTTAAAGCTGCC TERM 5155 4606180 - 4606141 - T 78 -10.1 -3.42315 | gap 1, opp_overlap 4606143 4606148, overlap 4606140 4606143 ATCAGATTTAAAAAT TACCGATTGGGGACAGGT TCAAC ACCTGTCCCCA-TGGGTT TTGGTTTAAAGCTGC TERM 5156 4606143 - 4606178 + T 100 -12.7 -4.55128 | gap 1, opp_overlap 4606141 4606140 4606143, overlap 4606148 CAGATTTAAAAATTA CCGATTGGGGACAGGT TCAAC ACCTGTCCCCA-TGGG TTTTGGTTTAAAGCT TERM 5157 4606178 - 4606143 - T 95 -12.7 -3.27476 | gap 1, opp_overlap 4606143 4606148, overlap 4606141 4606140 CAGATTTAAAAATTA CCGATTGGGGACAGGT TCAAC ACCTGTCCCCA-TGGG TTTTGGTTTAAAGCT TERM 5158 4606148 - 4606174 + T 100 -16.7 -2.82666 | opp_overlap 4606143 4606141 4606140, overlap 4606143 TTAAAAATTACCGAT TGGGGACAGGT TCAAC ACCTGTCCCCA TGGGTTTTGGTTTAA cdh1 4608150 - 4606186 - | Cdh1 TERM 5159 4607149 - 4607131 - G 73 -12.4 -2.56177 | overlap 4607130 ACACTGGATATCAAC GGCCATGG TAT CCACGGCC CCGGTGACCAGAATC TERM 5160 4607607 - 4607624 + g 90 -9.1 -4.59773 | overlap 4607599 TCCGCCAGGTCTCAA GGGTTCC CTTG GGGACCC TTTTTACAAATGGCA TERM 5161 4607902 - 4607923 + g 70 -2.9 -4.84359 | opp_overlap 4607902 CATAATGGTATCAAT GGTGGCG CCACATAC CCCCACC TTTTTATAAGGATCA HRM2_41020 4608737 - 4609198 + | predicted rubrerythrin Rbr icd 4610537 - 4609308 - | Icd TERM 5162 4609577 - 4609563 - G 74 -3.5 -5.00616 | GGTGGCCTCAAAAAA GGCAA TTTCC TCGCC CATGTTGGCCCCGGG hbr2 4611181 - 4610585 - | Hbr2 gltA4 4612401 - 4611217 - | GltA4 TERM 5163 4612246 - 4612261 + g 70 -4.6 -4.59853 | opp_overlap 4612245 4612246 4612240, overlap 4612248 AAGCAGAAACACAAC CTCCTC AAAC GAGGCG TTTTTGGCAAGTTCA ftrB 4612744 - 4612415 - | FtrB TERM 5164 4612609 - 4612594 - G 71 -10.4 -3.05596 | opp_overlap 4612592 TATCCCCTGAGGCAA GCCTGC ACGG GCAGGC CATGTATCCATAGGT TERM 5165 4612701 - 4612689 - G 83 -3.3 -5.42259 | opp_overlap 4612693 4612699, overlap 4612693 TCATTGTTAAAAAAA TACCC CTT GGGTT CATGGATTTTCCTGA HRM2_41070 4613000 - 4612734 - | ferredoxin-thioredoxin reductase (glutaredoxin family protein) HRM2_41080 4613210 - 4613004 - | putative heat shock protein Hsp33 TERM 5166 4613177 - 4613187 + g 76 -5.4 -4.83243 | TGCAGCCGCACTGGG GACA GGA TGTC TTTATTTTGTATCGC TERM 5167 4614104 - 4614089 - g 71 -5.4 -4.58395 | TTGATCTTTTAAAAA CGGTTC TGGA AAACCG CTTCAAGGCAAAGGG TERM 5168 4614221 - 4614199 - g 70 -2.6 -5.03314 | overlap 4614183 4614200 CGGACCGCCAAAAAA CTTGACTGGC ACG GCCAACCGAA CAACAGAATTCTCAT porA2 4613656 - 4615356 + | PorA2 TERM 5169 4615819 - 4615850 + G 72 -8 -3.85698 | gap 1, opp_overlap 4615817 4615818 CATCCCCGGTAAACC CCCTG-GCCCTGG CCATATC CCAGGGGGCAGGG TTTGTGGCAAGGGGA TERM 5170 4616182 - 4616199 + G 73 -3.3 -5.0538 | opp_overlap 4616172 4616184, overlap 4616184 ACAAATTTGATGCCA AAGCCGT TGCT GCGGCTC TTTTTTAACATAACC porB3 4615359 - 4616207 + | PorB3 TERM 5171 4616941 - 4616927 - g 71 -7.1 -4.15833 | ACCATCATGGCAAAA CACGG CCAGC CCGTG TTCCGAAAAAGCGTT HRM2_41110 4616231 - 4617388 + | FMN-dependent dehydrogenase family protein (TIM barrel family protein) TERM 5172 4617419 - 4617433 + F 89 -6.4 -5.27023 | overlap 4617421 CCCTTGTTGACAATC TGCCAC AAT GTGGTA TTTTATTTTTCGACT TERM 5173 4617421 - 4617431 + F 74 -6.8 -4.25502 | overlap 4617419 CTTGTTGACAATCTG CCAC AAT GTGG TATTTTATTTTTCGA TERM 5174 4617646 - 4617627 - g 70 -4.3 -4.65263 | ATTCCTCAAAATAAA CGGTAAT GACAGG ATCACCG ACGCAAGTTTCATGA HRM2_41120 4617490 - 4618053 + | predicted iron-sulfur cluster assembly protein (NifU like protein) iscS2 4618071 - 4619228 + | IscS2 TERM 5175 4619273 - 4619310 + T 100 -14.9 -3.87815 | opp_overlap 4619279, overlap 4619279 AACCGGCCTGCTGTC TTAAAACCGGGGTCAGG AAAG CCTGACCCCGGTTATGC TTTATCAAGCTGAAG TERM 5176 4619304 - 4619279 - T 100 -20.5 -4.07568 | opp_overlap 4619273 4619279 CCTGCTGTCTTAAAA CCGGGGTCAGG AAAG CCTGACCCCGG TTATGCTTTATCAAG TERM 5177 4619279 - 4619304 + T 100 -20.5 -3.64915 | opp_overlap 4619279, overlap 4619273 CCTGCTGTCTTAAAA CCGGGGTCAGG AAAG CCTGACCCCGG TTATGCTTTATCAAG HRM2_41140 4620243 - 4619305 - | permease of the drug/metabolite transporter (DMT) superfamily HRM2_41150 4621956 - 4620370 - | putative 3',5'-cyclic-nucleotide phosphodiesterase TERM 5178 4620452 - 4620479 + g 70 -8.6 -3.71607 | overlap 4620473 CCGTTCTCCTTCATC TTTCCCATAATT TCAA AAATATGGGAAA TTTCCATCCTCTTCC TERM 5179 4621218 - 4621235 + g 82 -11.3 -3.65812 | TTGACTCGTTTACGG CCATGGC AAGC GCCATGG TTATCTTCACCACCC TERM 5180 4621262 - 4621278 + g 80 -10.1 -3.97947 | ACCCGCTTGATGTGA TCGCCCG TAT TGGGCGA TTTCTCGTCAATGGC TERM 5181 4622147 - 4622123 - R 100 -12.9 -4.47183 | opp_overlap 4622123 4622145 CATTATCCAAACAAA TCCGGCTTGCC CAA AGCAAACCGGA TTTTAATCCTTATTT TERM 5182 4622123 - 4622147 + r 93 -10 -4.40037 | opp_overlap 4622123, overlap 4622145 CATTATCCAAACAAA TCCGGCTTGC CCAAA GCAAACCGGA TTTTAATCCTTATTT pckG 4624073 - 4622157 - | PckG TERM 5183 4623959 - 4623969 + g 74 -4 -4.9218 | TGGTCTGAAGAGCGA TCTT TAA AAGA TTTTTATCATCCATG TERM 5184 4624230 - 4624217 - H 75 -2.3 -5.252 | CAGTTTCACAAAAAA GAGCC AAAT GCCTC AAACAGAACTTTTTT TERM 5185 4624387 - 4624400 + G 74 -2.3 -5.14563 | ATCCAACAGCCACAG GGCCT ACCG GGGTC TTTTTTCATCGAAGA HRM2_41170 4624250 - 4624423 + | hypothetical protein rsbU1 4624661 - 4626130 + | RsbU1 TERM 5186 4627916 - 4627906 - g 73 -5.4 -4.61231 | GGACATCCTGAAAAA CATC CCG GATG AGGCACTTTTTTTTG HRM2_41190 4626161 - 4628671 + | ATPase family protein TERM 5187 4629037 - 4629018 - g 72 -8 -3.87075 | opp_overlap 4629018 4629017 ATGACCCGGGAGAAA TTTTCCAT GGTC ATGGAAAA ATTTCCTGAACTCAG HRM2_41200 4628649 - 4629170 + | cyclic nucleotide-binding domain (cNMP-BD) family protein rsbW1 4629184 - 4629639 + | RsbW1 TERM 5188 4629871 - 4629857 - g 78 -3.5 -5.2112 | AAGACCATGAAAAAA CTGGA ACACA CCCAG GGCAAGCTTGTGCTC rsbV 4629656 - 4629997 + | RsbV HRM2_41230 4630387 - 4630016 - | hypothetical protein HRM2_41240 4631255 - 4630389 - | hypothetical protein TERM 5189 4631105 - 4631076 - G 76 -6.9 -4.45068 | AGCGCGAAGAACAAA CCGGGCCATCAGG ACTT CAAGGCGGCCCGG TTGAAATTTTCCGGC HRM2_41250 4631898 - 4631293 - | hypothetical protein TERM 5190 4632371 - 4632359 - g 100 -4.1 -5.93809 | overlap 4632361 4632362 GTTTCAGAAAAAAAA CATCC GGG GAATG TCCCCCCCGGCCATT TERM 5191 4632382 - 4632361 - g 76 -5.7 -4.62054 | overlap 4632359 4632362 TTCAGAAAAAAAACA TCCGGGGAA TGTC CCCCCCGGC CATTGTCCGGGCCGG TERM 5192 4632727 - 4632712 - g 70 -9 -3.54109 | TCAAGGTAATCACAA CCCTGA GGGA TCAGGG GGTTACCATCCTTCT livF5 4632168 - 4632914 + | LivF5 paaK 4632911 - 4634143 + | PaaK HRM2_41280 4634462 - 4634265 - | hypothetical protein HRM2_41290 4634565 - 4634930 + | putative cation-transporting p-type ATPase C HRM2_41300 4635621 - 4635055 - | hypothetical protein TERM 5193 4635483 - 4635518 + g 83 -12.5 -3.54424 | gap 1, overlap 4635517 CACCGGCCGGGACCT CTACGCCGGCCGG-GG CCTCT CCGCCGGCCGGTGAGG TTTCAGGAAATGACC HRM2_41310 4636716 - 4635685 - | K(+)-dependent Na(+)/Ca(++) antiporter protein TERM 5194 4635865 - 4635845 - G 91 -5.3 -5.51165 | overlap 4635846 4635849 AAAACTGTAAAAAAA TGAACCGGC GCT GCCAGTCCC TGGCGGGTCACACTG TERM 5195 4635864 - 4635846 - G 75 -8.8 -3.88259 | overlap 4635845 4635849 AAACTGTAAAAAAAT GAACCGGC GCT GCCAGTCC CTGGCGGGTCACACT HRM2_41320 4639896 - 4636729 - | cation- (Ca++) transporting ATPase, E1-E2 type HRM2_41330 4640472 - 4639939 - | hypothetical protein TERM 5196 4640400 - 4640384 - G 74 -7.9 -4.25658 | ACTCTATTAAAATAA CGCTCCC TGG GGGAGGG AATTGCGAAGATCTT HRM2_41340 4640739 - 4640491 - | hypothetical protein HRM2_41350 4640960 - 4640736 - | hypothetical protein TERM 5197 4640826 - 4640802 - G 100 -7.8 -5.25803 | opp_overlap 4640822, overlap 4640803 4640806 AATCTTTACAAAAAA CCATCCGGCA GCAAT TGCCGGTTGA ACCCAGCTTTTAACA TERM 5198 4640825 - 4640803 - G 73 -9.1 -3.74397 | opp_overlap 4640822, overlap 4640802 4640806 ATCTTTACAAAAAAC CATCCGGCA GCAAT TGCCGGTTG AACCCAGCTTTTAAC TERM 5199 4641024 - 4641001 - H 74 -6.7 -4.32177 | overlap 4641003 TTAGGTTACAATAAA TACGGTCGC ACAAAG ACGACCGCA GTAATGTTCATTTGA TERM 5200 4641022 - 4641003 - H 70 -7.1 -3.76219 | overlap 4641001 AGGTTACAATAAATA CGGTCGC ACAAAG ACGACCG CAGTAATGTTCATTT TERM 5201 4641147 - 4641132 - H 75 -3.2 -5.09225 | overlap 4641134 ATTTCATGCAAAAAA GGGTTC AAAT GAACAC CATCCAGCTTAGCCC glpR1 4641140 - 4641958 + | GlpR1 phoH2 4643557 - 4642190 - | PhoH2 HRM2_41370 4641934 - 4642248 + | hypothetical protein TERM 5202 4642811 - 4642825 + gF 74 -7.8 -3.93288 | TAGGGCAAAGGCCTG CTCCGA GTT TCGGGG TTTAATTCCATAGCA TERM 5203 4643694 - 4643706 + FH 89 -10.5 -3.99228 | GAGCCATACCTCGCT CCGGC CAT GCCGG TTATATTTTAAATTC TERM 5204 4643759 - 4643749 - fH 71 -2.4 -5.10154 | overlap 4643750 ATCCAAAAGGAAAAA GGGG CTG CTCC GAGAAAACGAAGCGC TERM 5205 4644217 - 4644184 - gfH 100 -8.9 -4.62302 | gap 1, overlap 4644185 GAAGATCTTCAAAAA CTC-GCCCACCAGCTC CAG AAGCTGGTAGGCCGAT TCAAGGTGTAATGGC TERM 5206 4644216 - 4644185 - gfH 95 -12.4 -3.36658 | gap 1, overlap 4644184 AAGATCTTCAAAAAC TC-GCCCACCAGCTC CAG AAGCTGGTAGGCCGA TTCAAGGTGTAATGG TERM 5207 4644297 - 4644277 - gfH 73 -3.2 -4.91109 | gap 1, opp_overlap 4644283 4644291 CCTTTATCATAAAAA CCGG-GTCA TCGG TGTCACCGG GGTGGATTTTTCCAT HRM2_41390 4643931 - 4644338 + | putative methyl-accepting chemotaxis protein McpB HRM2_41410 4644974 - 4644645 - | hypothetical protein HRM2_41400 4644311 - 4644709 + | methyl-accepting chemotaxis sensory transducer HRM2_41420 4645231 - 4645037 - | hypothetical protein HRM2_41430 4645635 - 4645258 - | sensory box histidine kinase TERM 5208 4646064 - 4646087 + H 89 -7.5 -5.07486 | gap 1, opp_overlap 4646064 4646067 CGCCGTGAACTATAA CAT-CTGCGG TTCAC CCGCAGCATG TTTTTGTTGAAAGTC TERM 5209 4647282 - 4647260 - g 80 -2.7 -5.31877 | opp_overlap 4647263 4647264, overlap 4647263 AGGGATGAGAAAAAA GACTGGTAC GGATG ATACCATTC CTGCCGTTATGCCAA HRM2_41440 4646388 - 4647572 + | transposase (IS1294 family protein) TERM 5210 4647703 - 4647756 + F 72 -6.2 -4.24654 | gap 2, opp_overlap 4647721, overlap 4647704 4647705 TGTCTTGACTTAAGC TG-ACATCCCCTGATACA-AGCACAA CATG TTGTGCCCTGTATCAGGGGAGGAGTA TATTTTTTAACTTTT TERM 5211 4647704 - 4647754 + F 75 -9.1 -3.68677 | gap 1, opp_overlap 4647721, overlap 4647703 4647705 GTCTTGACTTAAGCT GACATCCCCTGATACA-AGCACAA CATG TTGTGCCCTGTATCAGGGGAGGAG TATATTTTTTAACTT TERM 5212 4647705 - 4647753 + F 89 -12.6 -2.79579 | gap 1, opp_overlap 4647721, overlap 4647704 4647703 TCTTGACTTAAGCTG ACATCCCCTGATACA-AGCACAA CATG TTGTGCCCTGTATCAGGGGAGGA GTATATTTTTTAACT HRM2_41460 4647733 - 4647939 + | hypothetical protein HRM2_41470 4648471 - 4647956 - | hypothetical protein HRM2_41480 4648931 - 4648566 - | hypothetical protein HRM2_41490 4650965 - 4649007 - | hypothetical protein TERM 5213 4649772 - 4649760 - G 70 -3.3 -4.79826 | overlap 4649750 ATACACCAGGAAAAA GATCC AGG GGAAC GAGGGCACCAGGATC HRM2_41500 4653172 - 4651061 - | hypothetical protein TERM 5214 4651262 - 4651236 - GR 100 -10.2 -5.15634 | overlap 4651249 CAGCCGATGAAAAAA CTCAGCCACAAA ATC TTCATGGCCGAG CTGTAGACCATGAGA TERM 5215 4651564 - 4651541 - GR 72 -3.7 -4.88736 | CACCATGGAGAAAAA CACGGCGCC TGCGAT GGTGACGTG GGAGCGGGACTGCCT TERM 5216 4652565 - 4652549 - GR 74 -3.5 -4.91109 | overlap 4652550 GCCCCAGGATAAAAA CGGCCGG ATC CAGGCCT TCCAGGGAACGGCGG HRM2_41510 4657844 - 4653045 - | peptidase M28B family protein TERM 5217 4654336 - 4654360 + gr 70 -7.1 -3.90318 | opp_overlap 4654336 4654340, overlap 4654337 CCGATCTCTTTCAAA TCAAGGCCAAG GCT TTTGGCCATGG TTTCTGAGATCATCA TERM 5218 4654605 - 4654581 - GR 71 -8.5 -3.53091 | overlap 4654582 ATGGCGGGTTTCAAA GGCCGTCCCAA GAC TTGTGACGGCG GGCTCGGCAAGGGGG TERM 5219 4654604 - 4654582 - GR 83 -12 -2.71712 | overlap 4654581 TGGCGGGTTTCAAAG GCCGTCCCAA GAC TTGTGACGGC GGGCTCGGCAAGGGG TERM 5220 4655230 - 4655214 - GR 80 -2.2 -5.40072 | GGCCGCGGAAAAAAA CCGG TCGTACACC CCGG CCTCGAACCATTGTC TERM 5221 4655722 - 4655738 + gr 78 -2.1 -5.24129 | overlap 4655724 ACCTTAACCCGATAC CCGTCCT TTG AGGTCTG TTTTTTGTCAACGGC TERM 5222 4657323 - 4657365 + gr 82 -7.6 -4.57569 | opp_overlap 4657328, overlap 4657324 4657332 GCTTTCTGGCCCCAG GTAAATCAGCGCCTTTGCCC CAA GGGCCAGGGCGTTGATCCAG TTTTTGCCCGAATCA TERM 5223 4657324 - 4657364 + gr 81 -11.1 -3.3422 | opp_overlap 4657328, overlap 4657323 4657332 CTTTCTGGCCCCAGG TAAATCAGCGCCTTTGCCC CAA GGGCCAGGGCGTTGATCCA GTTTTTGCCCGAATC TERM 5224 4657360 - 4657328 - GR 93 -11.9 -3.64703 | opp_overlap 4657324 4657323 4657332 CTGGCCCCAGGTAAA TCAGCGCCTTTGCCC CAA GGGCCAGGGCGTTGA TCCAGTTTTTGCCCG TERM 5225 4657332 - 4657356 + gr 100 -13.5 -3.23009 | opp_overlap 4657328, overlap 4657324 4657323 CCCCAGGTAAATCAG CGCCTTTGCCC CAA GGGCCAGGGCG TTGATCCAGTTTTTG HRM2_41520 4658632 - 4657871 - | ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component TERM 5226 4658672 - 4658654 - R 83 -8.8 -4.15698 | opp_overlap 4658662 4658663 4658667 TACCCACAGAAACAA CCTGGCCT GGC ACGCCAGG TTCAGGCCCTGGTCC HRM2_41530 4659423 - 4658674 - | ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component TERM 5227 4659309 - 4659289 - GR 76 -3.2 -5.09895 | overlap 4659290 CACGGATTTAAAAAA GGGCAG TGTCACCTG CCGCCC AGACCTTGAAACCCT HRM2_41540 4660627 - 4659362 - | hypothetical protein TERM 5228 4659772 - 4659761 - GR 78 -2.2 -5.252 | CATGTGGATAAAAAA CTGA TACA CCAG AATCCCAAGGGCCCT TERM 5229 4660526 - 4660507 - GR 71 -9.4 -3.02829 | GAGACCCTGTCAAGA TGAGGATA TTGG TATCCTCA GAGCTTAAATGTTCA HRM2_41550 4661604 - 4660642 - | hypothetical protein TERM 5230 4661394 - 4661409 + g 100 -6.2 -5.60993 | GGTCACGCTCTTCCT GGATAT AGTT ATATCC TTTTTTTATGAGCCG TERM 5231 4662374 - 4662334 - RH 100 -30.6 -4.83169 | opp_overlap 4662334 AGTTTCTTATAAAAA CCGGCACGGCCGGAGCAA GGGAT CTGCTCCGGCCGTGCCGG TTATTGGGAAAATTT TERM 5232 4662334 - 4662374 + rH 100 -29.9 -3.6279 | opp_overlap 4662334 AGTTTCTTATAAAAA CCGGCACGGCCGGAGCA AGGGATC TGCTCCGGCCGTGCCGG TTATTGGGAAAATTT TERM 5233 4662401 - 4662412 + rH 73 -3.6 -5.08011 | overlap 4662389 ATTTCAACGGCCCGG GGCC ATAG GGTC TTTTTTCCAAATTTT HRM2_41560 4662837 - 4662427 - | hypothetical protein TERM 5234 4662615 - 4662664 + gH 74 -7.4 -4.14013 | gap 3 CCTTGATCTGGTAGC CCTCATGGCC-TTCCCACCAGGT GACAGCA ACCT--TGGGATTGGCCATGAGG TTTTCCAGGGTTTTG HRM2_41570 4662788 - 4662973 + | hypothetical protein TERM 5235 4663015 - 4663027 + FH 78 -10.5 -3.28712 | GAGCCATATCGCGCT CCGGC CGT GCCGG TTATAGCAAACGGGA TERM 5236 4664311 - 4664332 + G 73 -2.9 -5.00884 | opp_overlap 4664305 ACTGGCAAACAGCCA CTGTGGATG CAAG CATCTCCGG TTTTTTCACCGACCT HRM2_41580 4663398 - 4664855 + | hypothetical protein TERM 5237 4664936 - 4664968 + F 100 -14.1 -3.31144 | opp_overlap 4664935 4664928, overlap 4664937 ATAAAGAGTATAGAT TGGTGCTGGCCGG AACCCAA CCGGCCGGCACCC TTATAACAATAGACA TERM 5238 4664937 - 4664967 + F 100 -17.6 -2.58544 | opp_overlap 4664935 4664928, overlap 4664936 TAAAGAGTATAGATT GGTGCTGGCCGG AACCCAA CCGGCCGGCACC CTTATAACAATAGAC TERM 5239 4665032 - 4665018 - g 100 -2.7 -6.02914 | TGGAGAGAAAAAAAA CCCTG TATTT CTGGG TACTGAAACGGCACA TERM 5240 4665624 - 4665597 - g 70 -4.8 -4.73613 | overlap 4665599 GGATCAGTAACAAAA TAGACGAATCCG TCTC CGGAATCATCGA GATTCAGGGGAATGC TERM 5241 4665622 - 4665599 - g 71 -7.4 -3.98016 | overlap 4665597 ATCAGTAACAAAATA GACGAATCCG TCTC CGGAATCATC GAGATTCAGGGGAAT TERM 5242 4666682 - 4666695 + G 86 -8.1 -4.66537 | opp_overlap 4666680 4666682 4666681 CTGGGCTACAAAATT GCCGA GCAA TCGGC TTTTCTGTTAAAAAA comA 4665002 - 4667551 + | ComA HRM2_41600 4667529 - 4668026 + | cyclic nucleotide-binding domain (cNMP-BD) protein HRM2_41610 4668670 - 4668188 - | hypothetical protein TERM 5243 4668214 - 4668225 + g 76 -3 -5.14477 | ACCCGATCATCCTGA GAAA GCCT TTTC TTTTTTCAATATCTG HRM2_41620 4670023 - 4668791 - | permease of the major facilitator superfamily TERM 5244 4669792 - 4669813 + g 79 -6.5 -4.63486 | gap 1, opp_overlap 4669785 CTGCAAAACCCAGGA CGCTTCCCAG CAC CAGGGA-GCG TTTTCTTCCCCAGAT fabH3 4671189 - 4670179 - | FabH3 TERM 5245 4671212 - 4671225 + r 71 -3.1 -5.07652 | overlap 4671204 TCCCCTTTTTATTTT CCAAT AAAT GTTGG TTTTCTTTTGGAGAA caiD1 4671978 - 4671205 - | CaiD1 TERM 5246 4674476 - 4674489 + G 70 -3.1 -4.85195 | gap 1, overlap 4674458 AGGTCAAACCGGACT GGCTGT ATG AC-GCC TTTTTGAGTTATTTT TERM 5247 4675214 - 4675225 + G 74 -7.2 -4.14739 | opp_overlap 4675211, overlap 4675212 TGACCGAACCCACCG GCGG AACA CCGC TTTTGAAATACATCA HRM2_41650 4672453 - 4675266 + | multi-domain fusion protein (anaerobic dehydrogenase/molybdopterin oxidoreductase/anaerobic formate hydrogen lyase 4Fe-4S complex) TERM 5248 4675357 - 4675317 - T 100 -9.8 -5.31456 | gap 1, opp_overlap 4675317 GCAAGGCACAAAAAA CGCTGAAACCGGAACGTAC TATA GTACGTGA-GGTTCCAGCG TTTTGCAGCAACGCC TERM 5249 4675317 - 4675357 + T 74 -7.6 -4.07568 | gap 1, opp_overlap 4675317 GCAAGGCACAAAAAA CGCTGAAACCGGAACGTAC TATA GTACGTGA-GGTTCCAGCG TTTTGCAGCAACGCC HRM2_41660 4675949 - 4675404 - | hypothetical protein HRM2_41670 4677505 - 4676054 - | hypothetical protein TERM 5250 4676206 - 4676223 + g 72 -4.1 -4.86621 | TCTGCCACTCATATC CCCTG GATTCAAA CAGGG TTTTTAATTGCCCGT HRM2_41680 4678301 - 4677513 - | hypothetical protein TERM 5251 4677567 - 4677579 + g 70 -9.1 -3.56594 | overlap 4677561 TTTGATTTTGGGCTG GGCAG CCA CTGCC TTTAACAGACTTTCA TERM 5252 4677618 - 4677606 - G 73 -3.3 -5.05606 | opp_overlap 4677610, overlap 4677610 4677611 TTCAAGAAAAATAAA GGAAG GCT CATCC ATGCGCCTATGGTGG HRM2_41690 4679458 - 4678298 - | putative glycosyl transferase family protein TERM 5253 4678350 - 4678368 + g 80 -3 -5.26119 | overlap 4678351 4678352 GCTTGAGCCCCCCCA AGGTCCAG GGG CTGGACAA TTTTATTTTTCCCGG TERM 5254 4678943 - 4678931 - G 71 -7.7 -4.09864 | AGCCATCCTTGAAAA GCTTG AAT CAAGC CGGATCAACTTTGGG TERM 5255 4679353 - 4679337 - G 77 -11.5 -3.36492 | GCGGGAACCGGACAA GGCAGGG CAG CCCCGCC TGTGACAAGGACAAT TERM 5256 4679466 - 4679476 + r 74 -6.8 -4.2528 | ATCTTCATTGCGCCT CCTG GTT CAGG TTTATTAGGTTCAAA gpmB 4680066 - 4679455 - | GpmB TERM 5257 4679584 - 4679573 - G 70 -2.2 -5.00616 | TCCCCCGGCAAAAAA CCTC TTCC AAGG GCATGGTAGGCAAGG HRM2_41710 4681174 - 4680053 - | glycosyl transferase family protein TERM 5258 4680363 - 4680331 - G 70 -3.4 -4.82901 | gap 2 GGGCCTCGAGAAAAA CCATGCCCAGGGACTC CCG GA-TCCC-GGGAAAGG CAAAAAGGTCTCCCG TERM 5259 4680897 - 4680917 + g 75 -10.4 -3.43492 | gap 1 CATTTGCACACCCAG GGCCCCAGG ATAT CC-GGGGCC TTGTAGTAGGTATGA TERM 5260 4681007 - 4680990 - G 76 -4.7 -5.05782 | overlap 4680991 4681001 ATTGACCTTAAAAAA TCCCGGA TCAA CCCGGGC CAGAGCCAGGGCCGA HRM2_41720 4682446 - 4681184 - | glucosyl transferase family protein TERM 5261 4681682 - 4681711 + g 100 -5.5 -5.82316 | opp_overlap 4681663 4681682 CCGGTCCCGCAAAAG GGCCAGGGCACGG TAAA CCGTTTCCAGTCC TTTTTTTTCAGTGAT cydA3 4683987 - 4682605 - | CydA3 TERM 5262 4683692 - 4683709 + g 70 -9.9 -3.19192 | opp_overlap 4683691 TAACCGGCATGACAT TTGGTGC ACCC GCACCAA TTAGATTCAATACCC TERM 5263 4683801 - 4683791 - G 70 -2.4 -5.00616 | CGGCCTTCTAAAAAA GCGG TTC CCCC CTTCCAGAGCCAGTG TERM 5264 4684210 - 4684200 - H 82 -3.2 -5.4251 | CCTACACACAAAAAA TGAC CTG GCCA GGGAAGCTTCGCCCA TERM 5265 4684468 - 4684450 - g 83 -5.3 -5.14965 | opp_overlap 4684450 AGCGCCATGAAAAAA CAACATC TGTGG GATGCTG GATTTTTAAACCAGA HRM2_41740 4684441 - 4685826 + | sigma-54 dependent sensory box histidine kinase/response regulator TERM 5266 4685838 - 4685824 - g 76 -5.6 -4.84219 | opp_overlap 4685824 4685825, overlap 4685825 AAAGGAGAAAACAAA TGACGG CAA CCGTCT ATTTTACCGACTTCA TERM 5267 4685825 - 4685837 + G 73 -9.1 -3.6543 | opp_overlap 4685824 4685825, overlap 4685824 AAGGAGAAAACAAAT GACGG CAA CCGTC TATTTTACCGACTTC HRM2_41750 4685823 - 4686977 + | ferredoxin (iron-sulfur cluster-binding protein) HRM2_41760 4687854 - 4687021 - | ABC-type Fe(3+) transport system, ATP binding protein (ATPase) HRM2_41770 4688867 - 4687851 - | ABC-type Fe(3+) transport system, permease component TERM 5268 4688058 - 4688045 - G 71 -6.7 -4.14392 | GGGCAAGGCGGAAAA TGTGG GGAA CCACA AGGCCCACAAACCCC TERM 5269 4688905 - 4688883 - R 95 -7.6 -5.0538 | overlap 4688885 TTCCATCCTAAAAAA GCTCCGGATG GAT CAGCCGGACC AATAGTTCAAGCCCC HRM2_41780 4689744 - 4688875 - | ABC-type Fe(3+) transport system, periplasmic substrate binding component HRM2_41790 4690800 - 4689937 - | two domain fusion protein (N:Fe-S oxidoreductase-C:4Fe-4S ferredoxin) TERM 5270 4690566 - 4690545 - G 74 -10.1 -3.53224 | overlap 4690548 CACTGTTGGGGCAAA GATTGCCGC AACG GCGGCAGTC AAGGCAATGCCAGAT HRM2_41800 4692789 - 4691236 - | transposase (IS4 family protein) TERM 5271 4693030 - 4693042 + H 91 -7.7 -4.75404 | opp_overlap 4693020 CCACAGGTTGTTCCG GCAAC CCA GTTGC TTTTTCCTGCGCTTT HRM2_41810 4693146 - 4693715 + | HTH-type transcriptional regulator acsL4 4693728 - 4695380 + | AcsL4 TERM 5272 4695422 - 4695380 - T 83 -12.1 -2.86164 | gap 1, opp_overlap 4695388, overlap 4695384 4695385 4695388 GCCGGAACGACGATA GGAATCAAGG-GCGTTGCCC AATC AGGCAACGCTCCTGGATTAC GCTTCGCCGTAAAGC TERM 5273 4695418 - 4695384 - T 86 -11.5 -3.31157 | gap 1, opp_overlap 4695388, overlap 4695380 4695385 4695388 GAACGACGATAGGAA TCAAGG-GCGTTGCCC AATC AGGCAACGCTCCTGGA TTACGCTTCGCCGTA TERM 5274 4695416 - 4695385 - T 91 -13 -2.58212 | opp_overlap 4695388, overlap 4695384 4695380 4695388 AACGACGATAGGAAT CAAGGGCGTTGCCC AATC AGGCAACGCTCCTG GATTACGCTTCGCCG TERM 5275 4695388 - 4695414 + T 73 -10.2 -2.55074 | gap 1, opp_overlap 4695385 4695384 4695380 4695388 GACGATAGGAATCAA GG-GCGTTGCC CAATCA GGCAACGCTCC TGGATTACGCTTCGC TERM 5276 4695413 - 4695388 - T 83 -11.1 -3.43785 | opp_overlap 4695388, overlap 4695385 4695384 4695380 GACGATAGGAATCAA GGGCGTTGCCC AATC AGGCAACGCTC CTGGATTACGCTTCG HRM2_41830 4696786 - 4695419 - | sigma-54 dependent two component transcriptional regulator TERM 5277 4695733 - 4695773 + g 100 -7.4 -5.40072 | opp_overlap 4695727, overlap 4695736 GGTAATGGATCATGG CGTCCATGGCCTCGGGGG TAAAC CCCCTGATGTCACGGTTG TTTTTTTCGGCAAAC TERM 5278 4695736 - 4695770 + g 100 -9.9 -4.79949 | opp_overlap 4695727, overlap 4695733 AATGGATCATGGCGT CCATGGCCTCGGGGG TAAAC CCCCTGATGTCACGG TTGTTTTTTTCGGCA HRM2_41840 4698765 - 4696786 - | sensory box hisitidine kinase TERM 5279 4697138 - 4697153 + g 79 -5.4 -5.0133 | overlap 4697139 ATTGTCACCTCTTTT TGATCC CTGG GGATCG TTTTTTCAACCCCTA TERM 5280 4697383 - 4697404 + g 73 -8.8 -3.73107 | opp_overlap 4697383 GAAATAGGTGGCAAA TCCCTTGA TGGAGC TCAAGGGA TTTCGAATTTCATGG TERM 5281 4697404 - 4697383 - G 70 -8.8 -3.58329 | opp_overlap 4697383 GAAATAGGTGGCAAA TCCCTTGA TGGAGC TCAAGGGA TTTCGAATTTCATGG TERM 5282 4698164 - 4698135 - G 72 -4.1 -4.82901 | CCCGGGTCAGAAAAA GGCCTTGAACAGC CCCG GCTGTCCTCCGCC TGCCCATGCGCCCCC TERM 5283 4698770 - 4698787 + H 74 -6.9 -4.39426 | overlap 4698772 AGTTTCACCATTGAC CACCCGG GGAG CCGGGTA TTTTATACCCATGTG TERM 5284 4698772 - 4698785 + H 81 -9.5 -3.80133 | overlap 4698770 TTTCACCATTGACCA CCCGG GGAG CCGGG TATTTTATACCCATG TERM 5285 4699013 - 4698999 - H 95 -7.8 -5.10968 | ATGAACAGACAAAAA GGTGGC CAG ACCACC ACAAAGGAGAAAACC TERM 5286 4699459 - 4699442 - g 70 -2.5 -5.03314 | GGGATTTGGAAAAAA GGGCTGC ATGG GAGGCCC CAGGAACGGCATGAC HRM2_41850 4699029 - 4699526 + | hypothetical protein TERM 5287 4699577 - 4699538 - T 100 -16.5 -4.29829 | opp_overlap 4699538 4699539 4699545, overlap 4699539 ATAAGCACCAATAAA GGAACAAGGCCCTCCTG TTCAAC CGGGAGGGCCTTGTTCA TTTCAACACAAATAC TERM 5288 4699538 - 4699577 + T 100 -18.7 -3.53444 | opp_overlap 4699538 4699539, overlap 4699539 4699545 ATAAGCACCAATAAA GGAACAAGGCCCTCCTG TTCAAC CGGGAGGGCCTTGTTCA TTTCAACACAAATAC TERM 5289 4699539 - 4699576 + T 100 -22.2 -2.71924 | opp_overlap 4699539 4699538, overlap 4699538 4699545 TAAGCACCAATAAAG GAACAAGGCCCTCCTG TTCAAC CGGGAGGGCCTTGTTC ATTTCAACACAAATA TERM 5290 4699576 - 4699539 - T 100 -20 -3.16813 | opp_overlap 4699538 4699539 4699545, overlap 4699538 TAAGCACCAATAAAG GAACAAGGCCCTCCTG TTCAAC CGGGAGGGCCTTGTTC ATTTCAACACAAATA TERM 5291 4699545 - 4699570 + T 100 -14 -3.89354 | opp_overlap 4699539 4699538, overlap 4699539 4699538 CCAATAAAGGAACAA GGCCCTCCTG TTCAAC CGGGAGGGCC TTGTTCATTTCAACA HRM2_41860 4700345 - 4699575 - | hypothetical protein TERM 5292 4699768 - 4699787 + g 74 -7.8 -4.25848 | opp_overlap 4699767 4699772 TTTTTTTCCATGAAC GCAAGGGT GATG ACCCTCGC TTTTAATCCACCCTT TERM 5293 4700113 - 4700130 + g 70 -9.9 -3.29471 | ATTGCAGGAACTGGC CGGGTTT CACC AAACCCG TTAATCTGATCCAGG TERM 5294 4700353 - 4700366 + r 71 -4.5 -4.62904 | ATTTTCATTTTAATT CCCAT GTTT GTGGG TTTTTAAACATATTT HRM2_41870 4700984 - 4700397 - | sigma-54 dependent DNA-binding response regulator (OmpR-like protein) HRM2_41880 4703591 - 4701018 - | sensory box histidine kinase TERM 5295 4701387 - 4701365 - G 95 -5.4 -5.58209 | overlap 4701366 TGAAATTCAAAAAAA CCTGCCCCAG ATC CTGGGGGTGA CAGTCAAAGTCCGGA TERM 5296 4701425 - 4701438 + g 78 -2.3 -5.30616 | CAGACAGCTCCAGGC GGGCA ATGA TTCCC TTTTTCTTTAAATAG TERM 5297 4702349 - 4702339 - G 93 -4 -5.75945 | ACCCTGGAAAAAAAA TCAA GAG TTGA AAAGTGCTGCCCCAT TERM 5298 4702516 - 4702529 + g 76 -4.5 -4.97888 | overlap 4702517 CTCAACTCCCGGTTC GCCTT TTCA AGGGC TTTTTCCATTTTTTT TERM 5299 4703075 - 4703091 + g 70 -2.9 -4.77173 | overlap 4703075 4703078 AGGGAACAGTAATAA CGGCATG GGT CGTGTTG TTTCTTTTCTCAAGA HRM2_41890 4704665 - 4703613 - | bacterial periplasmic substrate-binding protein TERM 5300 4704164 - 4704134 - G 76 -6.2 -4.65895 | gap 1, overlap 4704135 CCCCCGAGGGAAAAA TGGGAAC-GGAGA AGAGGA TCTCCCGTTCCCG CCATGGCAGGATGGT TERM 5301 4704163 - 4704135 - G 72 -9.7 -3.39216 | gap 1, overlap 4704134 CCCCGAGGGAAAAAT GGGAAC-GGAGA AGAGGA TCTCCCGTTCCC GCCATGGCAGGATGG TERM 5302 4704861 - 4704846 - g 70 -4.6 -4.73388 | opp_overlap 4704846 AACGCCTATGAAAAA GGGGCT TTTG ATCCCC CTCGTCTTTTTTATC HRM2_41900 4704808 - 4705251 + | hypothetical protein TERM 5303 4705671 - 4705682 + G 76 -5.8 -4.66535 | CCCCCACGATTATCC TGCC CCAT GGCA TTTATTTTGACCGTT HRM2_41910 4705244 - 4706434 + | hypothetical protein TERM 5304 4707315 - 4707330 + G 74 -6.8 -4.37734 | overlap 4707302 CCGCATGGTCCTGAC CAGCCT TCTG GGGCTG TTTTCAATTCTTCTG TERM 5305 4707740 - 4707721 - g 70 -2.1 -4.99861 | gap 1, opp_overlap 4707693 4707739, overlap 4707724 CATGAAGTAGAAAAA GAG-GCCC TTGTC GGACACTC ATTTGATGATTTTTT TERM 5306 4707739 - 4707749 + G 78 -4 -5.08824 | opp_overlap 4707721 GCCCTTGTCGGACAC TCAT TTG ATGA TTTTTTCAGTGCAGA TERM 5307 4707862 - 4707831 - g 77 -11.8 -3.11564 | gap 1, opp_overlap 4707855, overlap 4707829 TAAATCCATTCAATA TGATGCCGATATGAT CTC ATCAT-CCGGCATCA CCCATGCCATCTCCT TERM 5308 4708879 - 4708910 + G 71 -6.7 -4.18018 | opp_overlap 4708879 4708878 CCTGAAAAAATAATC TTTGAAATCACGG AAACAG CTGCGATTTCAAA TTTTCCATCAGCCCG HRM2_41920 4706446 - 4709262 + | hypothetical protein HRM2_41930 4709815 - 4709387 - | hypothetical protein arsC2 4710870 - 4709884 - | ArsC2 TERM 5309 4710237 - 4710223 - G 71 -7 -4.15044 | opp_overlap 4710222 4710223, overlap 4710232 GTCGCCTGCAAGAAA GCGGGC AAA GGCCGC GGCCATCTGGCTTCT TERM 5310 4711093 - 4711103 + H 70 -5.4 -4.56978 | opp_overlap 4711093 TGTTCGCAATTAAAT GCTT CAG AAGC TTTATTATTTCAACG HRM2_41950 4711128 - 4711289 + | hypothetical protein TERM 5311 4711349 - 4711321 - T 100 -16.7 -3.65351 | opp_overlap 4711316, overlap 4711322 GCATGGTCATCTAAA TCCGCTGCCCCTG AAA CAGGGGCAGCAGT CAGTCTTCCGGGTGT TERM 5312 4711348 - 4711322 - T 100 -20.2 -2.78996 | opp_overlap 4711316, overlap 4711321 CATGGTCATCTAAAT CCGCTGCCCCTG AAA CAGGGGCAGCAG TCAGTCTTCCGGGTG HRM2_41960 4711579 - 4711364 - | hypothetical protein TERM 5313 4713690 - 4713671 - g 71 -6.4 -4.31085 | opp_overlap 4713664 4713688, overlap 4713664 CAGATCAACGGAAAA TCCGTTGT CACG ACCACGGA CATGGACAAAATCCA gdhA5 4711739 - 4714864 + | GdhA5 hbr3 4714927 - 4715085 + | Hbr3 HRM2_41990 4715223 - 4715696 + | hypothetical protein TERM 5314 4715738 - 4715701 - T 100 -11.3 -4.73617 | gap 1, opp_overlap 4715701 4715702, overlap 4715702 AAAACAAATAACAAA CGGGGTCGGGCACCTGTA TGG TAAAGG-GCCTGACCCCA TTTTTTTCATATGAA TERM 5315 4715701 - 4715738 + T 100 -11.3 -5.58454 | gap 1, opp_overlap 4715701 4715702, overlap 4715702 AAAACAAATAACAAA CGGGGTCGGGCACCTGTA TGG TAAAGG-GCCTGACCCCA TTTTTTTCATATGAA TERM 5316 4715737 - 4715702 - T 95 -12.6 -3.4051 | gap 1, opp_overlap 4715701 4715702, overlap 4715701 AAACAAATAACAAAC GGGGTCGGGCACCTGTA TGG TAAAGG-GCCTGACCCC ATTTTTTTCATATGA TERM 5317 4715702 - 4715737 + T 100 -14.8 -3.93988 | gap 1, opp_overlap 4715702 4715701, overlap 4715701 AAACAAATAACAAAC GGGGTCGGGCACCTGTA TGG TAAAGG-GCCTGACCCC ATTTTTTTCATATGA TERM 5318 4715793 - 4715833 + T 87 -4.6 -5.43866 | GAGGCGTTTCAGATT TCGTTATGGCCGGATCAA ACATC TCGACCCGGCCATGCAGA TTTTTTTAAAGATTA dfx 4716220 - 4715846 - | Dfx TERM 5319 4716315 - 4716327 + r 78 -10.5 -3.3972 | overlap 4716310 GGAGCATACCCTGCT CCGGC CAT GCCGG TTAGTAGTTTTCTCC rbr4 4716906 - 4716328 - | Rbr4 TERM 5320 4717051 - 4717069 + H 100 -9.6 -4.59882 | opp_overlap 4717045 TAGAACATACCACGT CATGGATC GTT GGTCCATG TTATTTATTTTTTGC HRM2_42020 4717468 - 4718838 + | sigma-54 dependent sensory box histidine kinase/response regulator HRM2_42030 4718840 - 4719718 + | hypothetical protein HRM2_42040 4721625 - 4719715 - | cation-efflux family protein HRM2_42050 4722005 - 4721688 - | hypothetical protein HRM2_42060 4722284 - 4722024 - | hypothetical protein TERM 5321 4722250 - 4722238 - G 87 -4.9 -5.40072 | CTGTTGTCAAAAAAA GATTT CTG AAATC CAAATACCTGTTTTG TERM 5322 4722382 - 4722364 - R 75 -6 -4.60041 | overlap 4722380 ATTTATCCTGAAAAA GCATTATC GCC GAGAATGC AGGGTCGCAGACGCC HRM2_42070 4722560 - 4722351 - | hypothetical protein TERM 5323 4722567 - 4722553 - G 70 -4.2 -4.74103 | opp_overlap 4722553, overlap 4722555 CTGTCAAGGGAAAAA TGGTGC ACT GCACAA ATATTTAAAAAAAAG TERM 5324 4722607 - 4722582 - H 86 -2.6 -5.85178 | overlap 4722587 AATATTTAAAAAAAA GATTAGGATA GGGCGT TACCCCAACC GGCCCATGGAAATTA HRM2_42080 4722686 - 4723138 + | hypothetical protein phaE 4723182 - 4724081 + | PhaE TERM 5325 4724204 - 4724194 - g 73 -3.2 -4.98436 | TGAACAGCAGAAAAA GACC AAA GATC GTATTAAAAAAGGAC TERM 5326 4724651 - 4724638 - g 95 -2.3 -6.04324 | TGAAAAAATAAAAAA CCTTG TGAC CACGG TCACGCCGACCAACT phaC 4724132 - 4725205 + | PhaC HRM2_42110 4725236 - 4726303 + | GGDEF domain family protein maoC 4726335 - 4726784 + | MaoC TERM 5327 4727092 - 4727078 - gf 91 -2.8 -5.74684 | CAAGAAAAACAAAAA CAGC CCCCCCT GCTG GGAAATTCTTGACTG HRM2_42130 4726893 - 4727297 + | hypothetical protein HRM2_42140 4727269 - 4727580 + | hypothetical protein caiD2 4727830 - 4728651 + | CaiD2 HRM2_42160 4730020 - 4728680 - | NADH/FAD-dependent oxidoreductase TERM 5328 4728801 - 4728774 - G 100 -9.8 -5.00616 | TCGGTCTGGAAAAAA CCCTGTACATCC ATTC GGTTGTGCAGGG CAACGGCCGGGGCGT TERM 5329 4728974 - 4728986 + g 70 -9.1 -3.63922 | opp_overlap 4728972, overlap 4728972 CACCGGGTCAAACCC GGCTG CCA CAGCC TCTTTTGGAGACAAT TERM 5330 4729393 - 4729412 + g 84 -4.2 -5.31456 | gap 1, overlap 4729395 4729395 CGTCAATGGCATGGC CCGGG-TGC ATG GCAACCCTG TTTTTTGTCAATTCG pspC 4730486 - 4730043 - | PspC HRM2_42180 4730734 - 4730492 - | putative phage shock protein PspB pspA2 4731476 - 4730802 - | PspA2 TERM 5331 4731315 - 4731344 + g 79 -11.5 -3.59979 | gap 1 CTGCTGGACCCTTTT TCTGCCTGC-CATG GTG CCTGCGCAGGCAGA TTTAAGCTCCACAAG pspF 4731697 - 4732722 + | PspF TERM 5332 4732845 - 4732861 + G 80 -2.2 -5.42259 | overlap 4732835 4732846 TCCAGGCAGCCTTCG TGGCAG GCCTG CTGTCG TTTTTTTCACCGTGC dsbD 4732808 - 4733506 + | DsbD TERM 5333 4733548 - 4733564 + G 76 -2.9 -5.15117 | opp_overlap 4733548 AAAAAATCCTGAACA CACTCCT GGC AGTGGTG TTTTTTGCCATTTTC HRM2_42220 4733526 - 4733981 + | putative thioredoxin TERM 5334 4734087 - 4734071 - g 74 -6.5 -4.36931 | CAAGGGAGAGGAAAA CAGGGTA AAA TGCCCTG AATGCGGCAGCAAAG HRM2_42230 4733997 - 4734188 + | hypothetical protein TERM 5335 4734275 - 4734240 - f 100 -10.4 -5.43974 | opp_overlap 4734238 4734240 4734241, overlap 4734241 4734242 AAAACCAAAGAAAAA CCGTGGGAAGGGAATG ACGT CATCCCCTTCCCGCAC TATTTAAAACAATCA TERM 5336 4734274 - 4734241 - f 100 -13.9 -3.82724 | opp_overlap 4734240 4734238 4734241, overlap 4734240 4734242 AAACCAAAGAAAAAC CGTGGGAAGGGAATG ACGT CATCCCCTTCCCGCA CTATTTAAAACAATC TERM 5337 4734241 - 4734274 + F 80 -11.7 -2.60813 | opp_overlap 4734241 4734240 4734242, overlap 4734240 4734238 AAACCAAAGAAAAAC CGTGGGAAGGGAATG ACGT CATCCCCTTCCCGCA CTATTTAAAACAATC TERM 5338 4734273 - 4734242 - f 100 -15.2 -2.87194 | opp_overlap 4734241 4734240 4734238, overlap 4734241 4734240 AACCAAAGAAAAACC GTGGGAAGGGAATG ACGT CATCCCCTTCCCGC ACTATTTAAAACAAT ppiB2 4734324 - 4734830 + | PpiB1 HRM2_42250 4735011 - 4735289 + | hypothetical protein serB 4736509 - 4735286 - | SerB TERM 5339 4735943 - 4735930 - G 70 -4.5 -4.63184 | opp_overlap 4735938 AATCCATGTCAAAAA CCACA AGCT TGCGG TTCCGACTGTAAATG HRM2_42270 4736708 - 4737496 + | hypothetical protein TERM 5340 4737876 - 4737860 - g 80 -2.1 -5.41143 | overlap 4737861 TATTCCTCAAAAAAA TGGGCCA GTT TGCCCCC CAGATGGCACCAAGG TERM 5341 4738285 - 4738275 - g 70 -2.4 -4.91109 | opp_overlap 4738275 CTGCGACGATAAAAA CCTG CTT CTGG TGTGTGACGAAATCC rocD2 4737514 - 4738821 + | RocD2 glpR2 4739576 - 4738827 - | GlpR2 HRM2_42300 4741166 - 4739589 - | beta-lactamase-like:RNA-metabolising metallo-beta-lactamase TERM 5342 4741760 - 4741739 - g 71 -7.9 -4.07568 | overlap 4741742 GCTCTCCCTGGAAAA CATGGCCCA TGCC CGGGCCCTG GGCGCAACGCTTCTC glpA3 4741251 - 4742864 + | GlpA3 TERM 5343 4742933 - 4742900 - g 70 -10.9 -2.90227 | overlap 4742899 CCTCAACCATTAAAG CCGACCTTGCCGTCA TCGG TGCCGGCATGACCGG TATGGCAGCAGCCCT glpB3 4742854 - 4744158 + | GlpB3 TERM 5344 4744848 - 4744837 - g 82 -7.2 -4.7254 | overlap 4744839 ACGCCTCATGAAAAA CCCC ACCA GGGG GAAAAGGGAAAAGGG TERM 5345 4745673 - 4745691 + G 71 -7.4 -4.11394 | CGGGAAGGGCCGGGG CTGAAGGA ATT TCCGTCAG TTTTGCCGATGAGAT recQ2 4744355 - 4745968 + | RecQ2 tatB 4746042 - 4746395 + | TatB TERM 5346 4746582 - 4746594 + G 83 -5.5 -5.08169 | AAATGATTTTTACCG GCCTT CCC GAGGC TTTTTTCACCTATCT tatC 4746392 - 4747204 + | TatC HRM2_42360 4747507 - 4747959 + | cytochrome c, class III family protein TERM 5347 4747999 - 4748023 + T 100 -11.5 -5.86061 | TCACCAGCTTTTCAG GGCCTTTCC GTATTTA GGAAAGGCC TTTTTTTTGCTGGAA cbiA2 4749485 - 4748040 - | CbiA2 dsrD 4749763 - 4749506 - | DsrD TERM 5348 4749797 - 4749824 + r 93 -12.6 -3.08471 | opp_overlap 4749792 4749791 ATTTTAAAACGTGAC AGCCGGAGCACC TAGG GGCGCTCCGGCC TTGAATCACCTTGTC dsrB2 4751007 - 4749859 - | DsrB2 dsrA2 4752349 - 4751024 - | DsrA2 TERM 5349 4751814 - 4751832 + g 75 -10.2 -3.36492 | opp_overlap 4751805 4751798 TCACAACGGGAGGTA CCCAGGCA GTC TGCCGGGG TTCTCAGGTTGGAAC TERM 5350 4752479 - 4752461 - R 76 -11 -2.5194 | opp_overlap 4752460, overlap 4752460 4752463 CAACTATCTACCAAG GATGACCC AGG GGGCCATC ACGTTTCCTGCAATG HRM2_42410 4754371 - 4752530 - | putative selenocysteine protein TERM 5351 4753358 - 4753375 + g 79 -12.7 -3.06696 | CTCCATCACCCGGAT GCCGTGG GCGG CCACGGC TGTATTCAGGACAAA dapA 4754584 - 4755627 + | DapA TERM 5352 4755631 - 4755663 + T 72 -6.1 -4.26076 | opp_overlap 4755632 4755633, overlap 4755632 GAACAGGCATGATCA ACCGTGGGACAGACC CTG GGTCTGCCCCACAAA TTTTACTCGCCATCC TERM 5353 4755662 - 4755632 - T 100 -16.2 -3.23042 | opp_overlap 4755631 4755632, overlap 4755633 AACAGGCATGATCAA CCGTGGGACAGACC CTG GGTCTGCCCCACAA ATTTTACTCGCCATC TERM 5354 4755632 - 4755662 + T 72 -9.6 -3.15324 | opp_overlap 4755632 4755633, overlap 4755631 AACAGGCATGATCAA CCGTGGGACAGACC CTG GGTCTGCCCCACAA ATTTTACTCGCCATC TERM 5355 4755661 - 4755633 - T 100 -17.5 -2.53343 | opp_overlap 4755632 4755631, overlap 4755632 ACAGGCATGATCAAC CGTGGGACAGACC CTG GGTCTGCCCCACA AATTTTACTCGCCAT HRM2_42430 4756487 - 4755666 - | hypothetical protein TERM 5356 4756775 - 4756761 - g 70 -4.2 -4.66833 | GGGGAACCGGAAAAA CAACGG TCA CCGTCA ACCTTGCGGCATCTG minD2 4756718 - 4757578 + | MinD2 HRM2_42450 4757575 - 4758456 + | ferredoxin (iron-sulfur cluster-binding protein) TERM 5357 4758637 - 4758611 - g 71 -6.6 -4.18018 | overlap 4758616 4758617 4758625 GCGTTTGAGGTAAAA GAAAACGTTCAG AAC CTGAACCTTCCC CAGGGGGCGGGCATT TERM 5358 4758632 - 4758616 - g 83 -5.1 -5.10933 | overlap 4758611 4758617 4758625 TGAGGTAAAAGAAAA CGTTCAG AAC CTGAACC TTCCCCAGGGGGCGG TERM 5359 4758631 - 4758617 - g 70 -8.6 -3.65475 | overlap 4758616 4758611 4758625 GAGGTAAAAGAAAAC GTTCAG AAC CTGAAC CTTCCCCAGGGGGCG HRM2_42460 4758494 - 4758856 + | hypothetical protein TERM 5360 4759025 - 4759001 - g 71 -10.7 -3.09193 | ATTACAGGCACTGAA GTTCTTGAGCC CCC GGCCCATGAAC CAGGCGTCCTTCCAA HRM2_42470 4758893 - 4759249 + | hypothetical protein TERM 5361 4759289 - 4759257 - f 100 -16.4 -3.84246 | ACCATTAAGCAACAA GGGGGTCAGGTC AACGCTTAG GACCTGACCCCC TCAATGAAGTGACAA TERM 5362 4759645 - 4759588 - f 100 -26.5 -4.08216 | overlap 4759589 GTATTGCCCGCAAAA TCCCCCCCCAGCCGATTACAGGAAAAA CATG TTGTGCCTGTAATCGGCTGGGAGGGGC ACTCAAGGTTTCTAA TERM 5363 4759644 - 4759589 - f 100 -30 -3.04715 | overlap 4759588 TATTGCCCGCAAAAT CCCCCCCCAGCCGATTACAGGAAAAA CATG TTGTGCCTGTAATCGGCTGGGAGGGG CACTCAAGGTTTCTA HRM2_42480 4759844 - 4760842 + | hypothetical protein HRM2_42490 4760987 - 4760799 - | hypothetical protein TERM 5364 4760983 - 4760971 - G 76 -4.7 -4.95896 | AGAAATCTACAAAAA CCCCG TTC CGGCG GCATCCTGATCAGAT TERM 5365 4761424 - 4761479 + H 100 -31.4 -3.67068 | opp_overlap 4761424, overlap 4761427 4761428 ACTGCTTTCTATCAA TGCTCCCCAGCCGGACATCGGCACAA CATG TTGTGCCGATGTCCGGCTGGGGTATA TTTCAGGGTTTTAAT TERM 5366 4761479 - 4761424 - H 100 -31.4 -3.14211 | opp_overlap 4761424 4761427 4761428 ACTGCTTTCTATCAA TGCTCCCCAGCCGGACATCGGCACAA CATG TTGTGCCGATGTCCGGCTGGGGTATA TTTCAGGGTTTTAAT TERM 5367 4761427 - 4761477 + H 100 -33.7 -3.40843 | gap 1, opp_overlap 4761424, overlap 4761424 4761428 GCTTTCTATCAATGC T-CCCCAGCCGGACATCGGCACAA CATG TTGTGCCGATGTCCGGCTGGGGTA TATTTCAGGGTTTTA TERM 5368 4761428 - 4761475 + H 100 -38.8 -3.2632 | opp_overlap 4761424, overlap 4761427 4761424 CTTTCTATCAATGCT CCCCAGCCGGACATCGGCACAA CATG TTGTGCCGATGTCCGGCTGGGG TATATTTCAGGGTTT HRM2_42500 4761558 - 4762379 + | hypothetical protein TERM 5369 4762418 - 4762399 - T 84 -2.8 -5.72207 | opp_overlap 4762416, overlap 4762402 CTTAAATCAAAAAAA CAGGAATG GTAC CATCCTTG CTGTTGCAACTATTT HRM2_42510 4762777 - 4762574 - | hypothetical protein TERM 5370 4762699 - 4762685 - G 70 -4.2 -4.66537 | overlap 4762689 TTCCTGAATATAAAA GAAGTG GCC CACGTC CAACAAAATACCCCT TERM 5371 4762763 - 4762751 - G 73 -9.1 -3.70571 | TACAAAGATTTTAAA CCGTC CTG GACGG TAAAATGGAACCATT TERM 5372 4762793 - 4762781 - R 78 -10.5 -3.29385 | AAATGGAACCATTAA CCGGC ACG GCCGG AGTGAGGTATGGCTC TERM 5373 4762881 - 4762869 - R 80 -10.5 -3.48593 | overlap 4762870 GAGTGTTTCATATAA CCGGC ATG GCCGG AGCATGATATCTGCT TERM 5374 4762971 - 4762959 - R 89 -10.5 -4.03234 | overlap 4762960 GGCGTTTCATATAAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 5375 4762997 - 4762960 - R 73 -9.7 -3.01726 | overlap 4762959 GCGTTTCATATAAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATATAGAAACTCGA TERM 5376 4763196 - 4763184 - R 89 -10.5 -4.04474 | overlap 4763185 AGAGTTTCATATAAA CCGGC ACG GCCGG AGCGAGTTATGGCTC TERM 5377 4763222 - 4763185 - R 73 -9.7 -3.02202 | overlap 4763184 GAGTTTCATATAAAC CGGCACGGCCGGAGCGA GTTA TGGCTCCGGCCTCAACG AATGATGAAACGCCT TERM 5378 4763755 - 4763723 - R 86 -10.6 -3.77953 | opp_overlap 4763724, overlap 4763724 CGAATAAGCGAACAA GGGGGTCAGGTC AACATTTAG GACCTGACCCCT TCATTCAAACTATCC TERM 5379 4763724 - 4763754 + r 100 -14.1 -3.35371 | opp_overlap 4763724 4763723 GAATAAGCGAACAAG GGGGTCAGGTC AACATTTAG GACCTGACCCC TTCATTCAAACTATC TERM 5380 4763754 - 4763724 - R 95 -14.1 -2.86049 | opp_overlap 4763724, overlap 4763723 GAATAAGCGAACAAG GGGGTCAGGTC AACATTTAG GACCTGACCCC TTCATTCAAACTATC nox2 4765000 - 4763792 - | Nox2 TERM 5381 4764803 - 4764781 - G 77 -11.3 -3.38522 | overlap 4764779 4764782 4764795 CACGCAGGGTAAATA CCCCGGCAA GATCA TTGCCGGGA ATGGGCAAAACAAAG TERM 5382 4764802 - 4764782 - G 76 -12.6 -2.62792 | overlap 4764781 4764779 4764795 ACGCAGGGTAAATAC CCCGGCAA GATCA TTGCCGGG AATGGGCAAAACAAA HRM2_42530 4765147 - 4765013 - | hypothetical protein TERM 5383 4765638 - 4765628 - g 100 -5.4 -6.04953 | overlap 4765631 ACACAAAGAAAAAAA TGAG CTT CTCA AGCAGGTGGAGGCCC TERM 5384 4765963 - 4765952 - g 74 -7.2 -4.21194 | GGGCATGATTGAAAA GCCG AAGC CGGC AGACGCGCCCTCAAA gtaB 4765380 - 4766261 + | GtaB HRM2_42550 4766861 - 4766277 - | lytic murein transglycosylase precursor HRM2_42560 4767232 - 4766870 - | hypothetical protein TERM 5385 4766980 - 4766999 + g 79 -8 -4.42464 | overlap 4766993 GAAACACAGCCTCTT TTTCATCA GCCA TGATGAAA TTTCTTTCAACCCTT pcrA2 4770737 - 4767264 - | PcrA2 TERM 5386 4769404 - 4769415 + g 89 -2.2 -5.75945 | CCTGGCGTTTTAAGG GGAT CTGG GTCC TTTTTTTTCACAGGT TERM 5387 4769852 - 4769867 + g 71 -7.5 -4.05747 | GGGGTTTGCCGCATT GGGGG CAAATA CCCCC TTTGTCTGCGGTCTG HRM2_42580 4770833 - 4771807 + | putative HAD family hydrolase ahpF 4772266 - 4771796 - | AhpF HRM2_42600 4772533 - 4772883 + | cupin domain family protein HRM2_42610 4772887 - 4774506 + | hypothetical protein HRM2_42620 4774825 - 4774496 - | hypothetical protein crcB 4775217 - 4774840 - | CrcB TERM 5388 4775170 - 4775146 - G 78 -9.9 -3.8709 | AAATTGCTGGACAAA CCCTGCCAGGC TGT ACCGGGCAAGG GTTCCCAGGGCACCT TERM 5389 4775214 - 4775238 + g 91 -7.1 -5.18561 | overlap 4775211 AAACAAATTTGTGCT CCATGTGGAGG TCT CCTTTCCATGG TTTTTTAAGTGTTTG TERM 5390 4775907 - 4775917 + G 72 -8.2 -3.85817 | opp_overlap 4775907 4775903, overlap 4775915 CCCTGACGGAATCCA GGCG AGA CGCC TTTATCAGGAGGCAT cmk3 4775366 - 4776061 + | Cmk3 TERM 5391 4776464 - 4776492 + G 70 -11 -2.51966 | gap 1, overlap 4776463 TTTCACCGACGACCC GCCCCTGGAGCCT CCCA AGGC-CCAGGGAC ATTGATCCAGTTTAC HRM2_42650 4776048 - 4776497 + | hypothetical protein HRM2_42660 4776533 - 4777279 + | hypothetical protein TERM 5392 4777574 - 4777591 + G 79 -5.5 -5.0538 | opp_overlap 4777574 AACGGTTTGAAGTAA GGGTCAA GGTG TTGCCCC TTTTTTCACGTACCA TERM 5393 4777642 - 4777621 - g 70 -2.3 -5.05782 | gap 1, opp_overlap 4777621 ATCCAGGTGAAAAAA TTTGTAGTGG ACA CCCCT-CAAA TCTTCCTTGTAAAAA TERM 5394 4777759 - 4777775 + G 74 -6.6 -4.34737 | GGAGAGAAGGCTGGC GCTTTG CCCTT CAAAGC TTTGTTCGTTGATGA asmA 4777294 - 4779321 + | AsmA HRM2_42680 4779318 - 4780874 + | hypothetical protein HRM2_42690 4781497 - 4780871 - | FAD-dependent oxidoreductase family protein TERM 5395 4781007 - 4780985 - G 83 -2.7 -5.4251 | overlap 4780987 CGCATAGAGAAAAAA TCCATCCGA GTTAA TGGGATGAA CATAAAGGCTTTTTA TERM 5396 4781812 - 4781782 - H 72 -10 -2.85484 | opp_overlap 4781779 4781782, overlap 4781779 4781800 AAGGAGGGAGAATTA TGAATACCAATCAT GCA ATAATTGATATTCA TCATTTAAGACAAAA TERM 5397 4781923 - 4781933 + H 76 -2.6 -5.25735 | opp_overlap 4781923 CCATAAGTGATGAAA TTAT CCC ATAA TTTTTGATTTTTTGG TERM 5398 4782411 - 4782401 - g 70 -2.4 -4.91459 | CAATACTCATAAAAA CCCC ACA GGGT TTTCGCATGGACCAC HRM2_42700 4782076 - 4782609 + | hypothetical protein HRM2_42710 4783273 - 4782683 - | hypothetical protein feoB2 4785732 - 4783567 - | FeoB2 TERM 5399 4783918 - 4783907 - G 74 -7.2 -4.18018 | GTCCGCCAGTCAAAA CCGG CGAA CCGG GTAATGCCCTCAAGG TERM 5400 4784383 - 4784372 - G 85 -3.6 -5.40072 | overlap 4784373 TTGTCCTCAAAAAAA GCCG CCAC CAGC AGGGCAAATACGGGC TERM 5401 4785605 - 4785583 - G 79 -11.3 -3.64162 | opp_overlap 4785580 4785602 ATCAATGACTTCAAA CCTGCCTGC TTCGG ACAGGCAGG TGCCCTGTTTTTTTT TERM 5402 4785602 - 4785612 + g 100 -6.8 -5.75945 | opp_overlap 4785583, overlap 4785580 CCTGCTTCGGACAGG CAGG TGC CCTG TTTTTTTTCAACGGT feoA 4785967 - 4785734 - | FeoA TERM 5403 4785912 - 4785927 + g 82 -10.4 -3.90112 | CCGTCTGCCGTTACA CGGGAG ATAA CTCCCG TTTGGTTCACCACCA TERM 5404 4786173 - 4786151 - gH 89 -2.6 -5.70829 | overlap 4786152 AACATGATAAAAAAA CCCGGGCTTT CAG AAAGCCTTGA GGATTACCTTGAGAC TERM 5405 4786455 - 4786434 - g 86 -13.7 -3.57263 | ACGTTGATGCTGAAA CGGCAGACC GCAC GGCCTGCCG GATGGAACACGCCAT HRM2_42740 4786139 - 4786555 + | TroR TERM 5406 4786575 - 4786561 - gf 76 -7 -4.41548 | overlap 4786562 TGATACCTGACAAAA CCGGGC AAA GCCCGT TAAAGACCTTGGGTA TERM 5407 4786574 - 4786562 - gf 78 -10.5 -3.24447 | overlap 4786561 GATACCTGACAAAAC CGGGC AAA GCCCG TTAAAGACCTTGGGT HRM2_42750 4786425 - 4787192 + | hypothetical protein TERM 5408 4787560 - 4787534 - g 72 -8.1 -3.90744 | gap 1 GCGTCGGCCAAAGAA CTTGGC-TGGAC AGAT ATCCAGGCCAAG GTAGTGGAACTTTTG HRM2_42760 4787195 - 4788283 + | two domain fusion protein (ParB-like nuclease domain/HTH-type transcriptional regulator) TERM 5409 4789142 - 4789119 - g 79 -5.2 -5.02074 | TCATTCCTGAAAAAA GCCTATGATG CCTT CTTCATCGGC ACGGGTGCGCCAAGG TERM 5410 4789734 - 4789700 - g 70 -4.8 -4.65895 | GTTTGGACCCAAAAA CGTCATCACGGCCGTG GCC CATGGACATGAAGCCG CCATATCCATTGATC TERM 5411 4789900 - 4789930 + G 74 -8.2 -4.07687 | opp_overlap 4789896 4789904 4789907, overlap 4789901 CAACCGTTAAATCCA TCAAGGACCGCCTC ATG GAGGTGGAGCTTGG TTTTGACCAGAAAGT gltD3 4788513 - 4790285 + | GltD3 porA3 4790282 - 4792129 + | PorA3 porB4 4792126 - 4793178 + | PorB4 TERM 5412 4794066 - 4794052 - g 80 -4.2 -5.1244 | overlap 4794054 CGACGAATACAAAAA GGCG GGGATTG CGCC GGATCAGGTTTTTCC glpQ2 4793270 - 4794547 + | GlpQ2 HRM2_42810 4794743 - 4795174 + | hypothetical protein TERM 5413 4795214 - 4795194 - T 100 -14.7 -5.06103 | opp_overlap 4795208 ACAACTTTTAAAAAA GGGCGGACC TTA AGTCCGCCC TCGACGGATTTTGAC ecaB 4796204 - 4795248 - | EcaB TERM 5414 4796043 - 4796054 + g 73 -5.8 -4.57837 | CTCAAGGGCTGCTGT CAGG TAGG CCTG TTTTTCAGCCGCTAT HRM2_42830 4796726 - 4796415 - | hypothetical protein dctP9 4796989 - 4798074 + | DctP9 TERM 5415 4798134 - 4798100 - f 89 -11.4 -3.45023 | overlap 4798083 4798101 GGACCATGATGATAA CCCGGGCTTTCGGCAA ATT CTGCCGAAAGCCTTGA AATGATAAACACAAG TERM 5416 4798133 - 4798101 - f 88 -12.7 -2.66692 | overlap 4798083 4798100 GACCATGATGATAAC CCGGGCTTTCGGCAA ATT CTGCCGAAAGCCTTG AAATGATAAACACAA dctQ9 4798136 - 4798654 + | DctQ9 dctM9 4798694 - 4799974 + | DctM9 TERM 5417 4800031 - 4800070 + GF 70 -9.5 -2.79183 | gap 3, opp_overlap 4800043 ATTTAAGATACAGTG TCATCCGTGAAATGGGCGGC ATG GCCGCCCA---CATGGATGA TGTCATCACCCTGGG TERM 5418 4800061 - 4800043 - gf 100 -16 -3.55444 | opp_overlap 4800031 GTGTCATCCGTGAAA TGGGCGGC ATG GCCGCCCA CATGGATGATGTCAT TERM 5419 4800319 - 4800304 - gf 78 -10.4 -3.37796 | CCGCAGCACTGAGAA CCCTGC TTGA GCAGGG GGACCATGTCCTCCT aspC5 4799982 - 4801151 + | AspC5 HRM2_42880 4801058 - 4801618 + | hypothetical protein HRM2_42890 4802527 - 4801688 - | Kef-type potassium- (K+) channel protein TERM 5420 4801888 - 4801898 + g 76 -4.6 -4.92756 | opp_overlap 4801881, overlap 4801877 TCAACGAAGCCAGTG CCTG GCC CGGG TTTGTTTTTGGTGAT HRM2_42900 4803437 - 4802757 - | two-component response regulator (OmpR-like protein) HRM2_42910 4804998 - 4803481 - | signal transduction histidine kinase TERM 5421 4803705 - 4803717 + g 73 -3.3 -5.0133 | opp_overlap 4803705 AGTCCTCAAAGATTA GAACG ACC CGATC TTTTTTCACCCCATG TERM 5422 4804266 - 4804286 + g 75 -12.5 -2.50816 | opp_overlap 4804262, overlap 4804265 AATCAAATTTACGCA TGGCCCGCG TTC CCCGGGCCA GTTCCTGAATAGGGG TERM 5423 4804692 - 4804680 - G 83 -9.1 -4.38712 | opp_overlap 4804680 GTGATTGGGATAAAA GCCTG TGC CAGGC TTGTTCATTGTCCTG TERM 5424 4804680 - 4804692 + g 75 -9.1 -3.86981 | opp_overlap 4804680 GTGATTGGGATAAAA GCCTG TGC CAGGC TTGTTCATTGTCCTG TERM 5425 4805509 - 4805499 - H 71 -3.2 -5.00884 | ATTTTTTTTAAAAAA GCTG TTT CAAC CATAATTTTACTGTA TERM 5426 4805649 - 4805661 + H 78 -10.5 -3.29144 | AGCAGATACCTCGCT CCGGC CGT GCCGG TTATAAGAAACGTCC TERM 5427 4805739 - 4805718 - H 93 -12.3 -2.94747 | TCATCTGATGAGACA TTGCCGAGG AATC CCCCGGCAA GAGTAAATCCTAAAT HRM2_42920 4805774 - 4806958 + | hypothetical protein TERM 5428 4806984 - 4807016 + F 100 -8.5 -5.52347 | opp_overlap 4806984 4806983 4806986 TTGTTTTAAAAAATG CACATCCCCTG CCCACCGATTC CGGGGGATGTG TTTTTTAATTTTCTT TERM 5429 4807267 - 4807241 - f 80 -11.7 -2.61027 | gap 1, opp_overlap 4807241, overlap 4807240 4807238 4807234 4807243 TTATCAAATCAACAT GACCGGAG-AGA GGTC TCTGCTCCGGTC GCAACGAATGCTGAA TERM 5430 4807936 - 4807949 + G 71 -5.3 -4.57073 | GTTTTATGTGGCAGG GTTTC CTGT GAAAC TTTTTGCCGAGAATG HRM2_42930 4807373 - 4808350 + | hypothetical protein TERM 5431 4808463 - 4808486 + G 73 -8.8 -3.68359 | overlap 4808458 TACTTGCCTCCCTGA CCCTTGCCCT GGAC AGGGGAGGGG TTCTGGTTTTAACCG TERM 5432 4809616 - 4809590 - g 82 -7.3 -4.68601 | overlap 4809569 ATCCAAAAGAACAAA CCCATGTCCAA AACCA TTGAACAAGGG AATCCGGACTTAGAC gspA 4808357 - 4809691 + | GspA TERM 5433 4809765 - 4809741 - T 95 -7.8 -5.24129 | GGCGGGTATAAAAAA GGCCCCCAGA GAACT TCCAGGGACC TTGCAGAAGGATTAA HRM2_42950 4810113 - 4809811 - | hypothetical protein TERM 5434 4810024 - 4810036 + g 70 -3.4 -4.77759 | overlap 4810013 TTCAGCAGATCCATA GGTA TCTGC TACC TTTTTCATCGCTTCT HRM2_42960 4810605 - 4811294 + | ABC-type transport system, ATP-binding protein TERM 5435 4811634 - 4811655 + G 70 -8.9 -3.57144 | TGGGGATTGACCCTT TTTCTGAAA TGGA TTTCAGAAA TTTCAGCATCCGGAC TERM 5436 4812398 - 4812414 + G 74 -3.5 -5.01732 | overlap 4812399 CTGGCGGGAATTATC TCTGCCG TTA CGGCCGC TTTTTTCCCGGCATT TERM 5437 4813420 - 4813408 - g 73 -3.3 -4.9448 | opp_overlap 4813408 ATCCATCAAACAAAA CATCC TTG GGGTG TTTGACAGAACCTTT HRM2_42970 4811294 - 4813834 + | putative ABC-type transport system, permease component TERM 5438 4814773 - 4814760 - g 83 -9.5 -4.27316 | overlap 4814769 TCCGTCAATGGAAAA GCCCG ACAA CGGGC AACCAATATCCCAGT TERM 5439 4814798 - 4814780 - g 72 -9.6 -3.36135 | overlap 4814769 4814782 ACAACGGGCAACCAA TATCCCAG TCT CTGGGACA TTAAACTGCCGGATC TERM 5440 4814796 - 4814782 - g 70 -10 -3.24597 | overlap 4814780 4814769 AACGGGCAACCAATA TCCCAG TCT CTGGGA CATTAAACTGCCGGA HRM2_42980 4813841 - 4814959 + | putative ABC-type transport system, hydrolase component ppsA8 4817282 - 4815081 - | PpsA8 TERM 5441 4816342 - 4816380 + g 72 -3.8 -4.76041 | gap 1, overlap 4816362 GTTCCCTCTAGTCCC CCA-CTGGTGATCGGCC TTGCCT GGAGGACCACCAGCTGG TTTTTACTGAATGTC TERM 5442 4816652 - 4816638 - G 71 -11.4 -2.82895 | overlap 4816637 GTCGCCATCAACAAG GGCCTG GTT CAGGCC ATACACGGATTCAAT TERM 5443 4816717 - 4816707 - G 73 -3.2 -5.05782 | ATTCATGCCAAAAAA GATC CCG GACC TGTCGGATGCGACCA TERM 5444 4817187 - 4817169 - G 71 -6.7 -4.1899 | gap 1, opp_overlap 4817172 4817174 GCAGGGGATGCAAAA GGTC-CGG GGAA CCGTGACC CCCTGTTCATGAATT HRM2_43000 4817734 - 4817279 - | hypothetical protein HRM2_43010 4817962 - 4818912 + | hypothetical protein TERM 5445 4818994 - 4819025 + T 79 -8 -4.26076 | gap 1, opp_overlap 4819000, overlap 4818999 4819000 GAAACCTGTTAAGAT CAACAA-CCTCCGGC AGA GCCGGAGGCTTATAG TTTTGATGCCAATAC TERM 5446 4818999 - 4819019 + T 100 -12.5 -3.70546 | opp_overlap 4819000, overlap 4818994 4819000 CTGTTAAGATCAACA ACCTCCGGC AGA GCCGGAGGC TTATAGTTTTGATGC TERM 5447 4819018 - 4819000 - T 100 -16 -3.82084 | opp_overlap 4818999 4818994 4819000 TGTTAAGATCAACAA CCTCCGGC AGA GCCGGAGG CTTATAGTTTTGATG TERM 5448 4819000 - 4819018 + T 100 -16 -2.81604 | opp_overlap 4819000, overlap 4818999 4818994 TGTTAAGATCAACAA CCTCCGGC AGA GCCGGAGG CTTATAGTTTTGATG hgdC1 4819787 - 4819020 - | HgdC1 hgdA 4821050 - 4819821 - | HgdA TERM 5449 4820408 - 4820398 - G 83 -5.4 -5.20735 | GCAAGAAAAAAGAAA GCAT CAA ATGC AGACATGGGAGAGGG TERM 5450 4820502 - 4820513 + g 76 -3 -5.18643 | overlap 4820495 GACAGTGGCCATCTT TTCA TGGT TGAA TTTTCTTTTGGTTAC hgdB1 4822178 - 4821066 - | HgdB1 TERM 5451 4822594 - 4822566 - g 85 -13.1 -3.69976 | opp_overlap 4822571 4822579 AAAAGAGTTGAACAA CAGGATCCTGTCC GCA GGCCCGGATCCTG TCCGAGCCGCCATTG HRM2_43050 4822321 - 4822938 + | HTH-type transcriptional regulator (TetR family protein) TERM 5452 4823262 - 4823274 + T 78 -10.5 -3.28712 | ATGCCATCCCTCGCT CCGGC CGT GCCGG TTATAAAAAACCAAG TERM 5453 4823295 - 4823285 - T 75 -3.2 -5.24129 | GCCGGTTATAAAAAA CCAA GCT CTGG AATGGGCATGAGCTT HRM2_43060 4823673 - 4823275 - | hypothetical protein HRM2_43070 4824772 - 4824020 - | hypothetical protein atoE 4825869 - 4824538 - | AtoE TERM 5454 4826166 - 4826178 + r 82 -10.5 -3.61062 | ATAACATCTCTTGCT CCGGC CGT GCCGG TTATATCATTCAGTT TERM 5455 4826431 - 4826417 - R 80 -4.9 -5.08824 | GGCTGACGGAAAAAA CGGAG TCAAG CCCCG GTATAGACCTGCATG HRM2_43090 4831154 - 4826670 - | acriflavin resistance family protein (AcrB/AcrD/AcrF family protein) TERM 5456 4828886 - 4828861 - G 90 -9.7 -4.58395 | gap 1 GGGATGTCGGAAAAA CCGTCAACCCGC ATG GCG-GTTGCCGG AACACCCTGCACGGC TERM 5457 4830149 - 4830128 - G 74 -2.1 -5.08601 | overlap 4830130 GGATGGTAAGAAAAA CGGCCTGCC ACAG GGAAGATCG CATGCCATGGACATT TERM 5458 4830222 - 4830243 + g 70 -4.4 -4.72272 | opp_overlap 4830221 GATATCCGGATAATC GGCCCT GATGTGCACA AGGGCC TTTTTAATCCCAACA TERM 5459 4831089 - 4831049 - G 72 -9.8 -3.34398 | gap 1, overlap 4831047 CGCTTTCGGGAAACA GGTCCGTGGGAACCACCAC ATAG GCAATGGTTCCCATG-ACC ACCACCACCAGCACC HRM2_43100 4832314 - 4831151 - | putative membrane efflux protein TERM 5460 4831346 - 4831321 - G 76 -3.1 -5.18726 | overlap 4831322 TCGCCACAATAAAAA CCGCGTCACCA CCCC CGGGAACGGGG ATCAGACTCGCTTCC TERM 5461 4831771 - 4831782 + g 76 -7.2 -4.42653 | overlap 4831769 TTATCTGCTCGGTTG CCGC CTGG GCGG TTTTCTCCATGGACT marR 4832777 - 4832343 - | MarR ffp 4833697 - 4832942 - | Ffp TERM 5462 4833527 - 4833512 - G 79 -8.2 -4.38927 | TCTGGACAGAACAAA CCGGAG AAGT CCCCGG GTCACAAGGCAGGTG TERM 5463 4833958 - 4833917 - g 77 -11.7 -3.06162 | TATCTGATTTCAAGA CGCGTCAATGGAAGCATAT TGGA ATATGTGCCCATTGACGCA ACGCTGAAAGCAGGT TERM 5464 4834648 - 4834670 + G 71 -7.7 -4.11216 | opp_overlap 4834643 4834647 ACCGCTCAAAGGCAT GGGAACAGC CTTCA GCTCTTCCC TTTTCGGACTGGGCG HRM2_43130 4833803 - 4834960 + | hypothetical protein TERM 5465 4835156 - 4835128 - g 78 -6 -4.84359 | opp_overlap 4835144 CTATGGCCAGAAAAA TGAACTGGCC GACCTCCAT GGCCAGATCA GTGAACTGGCAGAGC TERM 5466 4835338 - 4835327 - g 71 -5.8 -4.42619 | overlap 4835317 4835329 4835332 GAAGAGCTGATAAAA CAGC AGAT GCTG ACCATGGTCAGCCTC motB4 4834973 - 4836250 + | MotB4 HRM2_43150 4836762 - 4836298 - | putative 5-nitroimidazole antibiotic resistance protein ftcD1 4838405 - 4836762 - | FtcD1 hutI 4839670 - 4838420 - | HutI TERM 5467 4839722 - 4839751 + r 73 -7.1 -4.15565 | overlap 4839721 TTTACCCATGTTTAA CCCCTTGGGGTTT AATC ATACTCCAAAGGG TTTTACAATGGTGAA HRM2_43180 4840544 - 4839897 - | hypothetical protein TERM 5468 4840032 - 4840022 - G 71 -6.8 -4.20106 | AAACCGTATCCAAAA CCGT CAC ACGG TGGGCCTTCAAAAGA HRM2_43190 4840784 - 4840626 - | hypothetical protein TERM 5469 4840867 - 4840879 + H 74 -10.5 -2.62184 | GAGTCATACCTCGCT CCGGC CGT GCCGG TGATATGAAAAAAAA TERM 5470 4841279 - 4841261 - g 95 -6 -5.40625 | ACACCATAGAAAAAA CCCTTAAA AAA TCCAAGGG CATAGAAAAGGTCTC copA 4840906 - 4843386 + | CopA TERM 5471 4844878 - 4844866 - g 82 -4.1 -5.24531 | opp_overlap 4844866 AGTTCGGATAAAAAA GCAAC TGG ATTGC TTTTTGCCGGTTCAA HRM2_43210 4844032 - 4844964 + | hypothetical protein TERM 5472 4845296 - 4845278 - g 78 -13.2 -2.63102 | opp_overlap 4845273 4845272 ATGAGGTGGAGATCA TCCAGCAG GTT CTGCTGGA TGAAAGTATTGATAG HRM2_43220 4844995 - 4845924 + | hypothetical protein TERM 5473 4845934 - 4845969 + F 80 -9.9 -3.65991 | gap 1, opp_overlap 4845938, overlap 4845939 TCCTAGTGGTATTAT TTAACGGGGCAGACGG CAATA TTGTCTGCCCC-TTAA TTCTCTTAAGACGGT TERM 5474 4845939 - 4845965 + F 100 -12.3 -3.54382 | opp_overlap 4845938, overlap 4845934 GTGGTATTATTTAAC GGGGCAGACGG CAATA TTGTCTGCCCC TTAATTCTCTTAAGA HRM2_43230 4846098 - 4846322 + | hypothetical protein TERM 5475 4846375 - 4846361 - T 71 -8.6 -3.54012 | AAATCAGTTATAGAA CCAGAT GGC ATCTGG CTAGCCCTATACCCG HRM2_43240 4848685 - 4846559 - | GGDEF domain family protein HRM2_43250 4851575 - 4848672 - | sensory box histidine kinase/response regulator TERM 5476 4850021 - 4850001 - G 74 -9.8 -3.63266 | opp_overlap 4849990, overlap 4849990 4850009 AAAATCCACCGTAAA GGAAAAGG TGGAT CCTTTTCC AGGTTCACTCTCACA TERM 5477 4851206 - 4851188 - G 71 -7.5 -4.08216 | CCAGTTGCTTGAAAA TATCCTG TCGGG CAGGATA AGCGGCGTTTAAATC TERM 5478 4851253 - 4851279 + g 100 -12.4 -4.91109 | opp_overlap 4851245 GTATCAACACCCTTC CGGTGATACTTA CTG TAGGTGTCACCG TTTTTATCATACAGA HRM2_43260 4852144 - 4851572 - | hypothetical protein HRM2_43270 4852396 - 4852154 - | hypothetical protein HRM2_43280 4852803 - 4852393 - | hypothetical protein TERM 5479 4852980 - 4853017 + r 76 -9.7 -3.315 | overlap 4853006 AGGTGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCGTGCCG GTTTTGTATGAAACT TERM 5480 4853006 - 4853018 + r 100 -10.5 -4.53303 | overlap 4852980 GAGCCATACCTCGCT CCGGC CGT GCCGG TTTTGTATGAAACTC HRM2_43290 4853731 - 4853351 - | transposase TERM 5481 4853570 - 4853587 + g 86 -2.7 -5.5604 | gap 1 CAGTTTGTAATATTT GGC-CTTG TAA TAAGAGCC TTTTTTCTTGATTGC HRM2_43300 4854727 - 4853741 - | transposase TERM 5482 4853964 - 4853976 + g 100 -5.5 -5.7946 | overlap 4853965 CCATTAAGGCTTTTA TGCAG TTC CTGCG TTTTTTTCTTAAGGC TERM 5483 4854856 - 4854896 + H 73 -9 -3.48276 | gap 1, overlap 4854857 GTCGAGTTTCTATAT TCGTTGTGGCCAGAGCCGA TACT TCG-CTCTGGCCGTGCCGG TTATATGAAACGCCC TERM 5484 4854857 - 4854895 + H 74 -10.3 -2.68823 | gap 1, overlap 4854856 TCGAGTTTCTATATT CGTTGTGGCCAGAGCCGA TACT TCG-CTCTGGCCGTGCCG GTTATATGAAACGCC TERM 5485 4855363 - 4855375 + H 80 -10.5 -3.48276 | TGAAGATACCTCGCT CCGGC CGT GCCGG TTATATGAAACACCC TERM 5486 4855452 - 4855464 + H 80 -10.5 -3.48924 | ATGCCATCCCTCGTT CCGGC CGT GCCGG TTATATGAAACCTAA TERM 5487 4855991 - 4855979 - gH 91 -3.3 -5.75342 | overlap 4855981 CTGTGGCAAAAAAAA GCCAG GGA CTGTC TGACAGTGCTGCCGC HRM2_43310 4855816 - 4857276 + | putative receptor protein HRM2_43320 4857222 - 4857854 + | putative receptor protein HRM2_43330 4860281 - 4858167 - | hypothetical protein TERM 5488 4858233 - 4858213 - G 71 -11.1 -2.79327 | overlap 4858212 GGAGTGGATGGAAAG CTCACCGGA TTG TCCGGGGAG ATGAACAGGGTGACA TERM 5489 4859965 - 4859996 + g 77 -11.4 -3.37056 | TGGGTCCTGGCTTCT GCCTGGGTCCTGGC CTCT GCCTGGGTCCTGGC TTCTGCCTGGGTCCT TERM 5490 4860001 - 4860032 + g 77 -11.4 -3.35798 | overlap 4860019 4860023 TGGGTCCTGGCTTCT GCCTGGGTCCTGGC CTCT GCCTGGGTCCTGGC TTCTGCCTGGGCCCT TERM 5491 4860023 - 4860046 + g 70 -11.6 -2.6063 | overlap 4860001 4860019 TCCTGGCCTCTGCCT GGGTCCTGGC TTCT GCCTGGGCCC TGACTTCTGCCTGGG TERM 5492 4860054 - 4860087 + g 86 -15.1 -2.91199 | overlap 4860072 4860077 CTGGGCCCTGACTTC TGCCTGGGCCCTGGC CTCT GCCTGGGCCCTGGCC TCTGCTTGGGCCTTG HRM2_43340 4863974 - 4860468 - | hypothetical protein HRM2_43350 4865230 - 4863971 - | DNA repair exonuclease family protein HRM2_43360 4865679 - 4865335 - | hypothetical protein TERM 5493 4865776 - 4865790 + r 73 -5.6 -4.43844 | overlap 4865777 ACAAAAGGACTTTTT TCCGGG TTT TCCGGG TTTTATCCATACTGA TERM 5494 4865875 - 4865862 - R 78 -2.4 -5.4505 | TGTTTGAACAAAAAA TTGC CCATAT GCAA GGCGCAAGAAATTCT TERM 5495 4866014 - 4865993 - R 82 -10.2 -3.59966 | opp_overlap 4865992, overlap 4865979 ACATTGCACATAGAA GGTGCAAC GTTCAG GTTGCACC CTGTCATTTGGCTTC HRM2_43370 4866572 - 4866093 - | hypothetical protein TERM 5496 4866681 - 4866691 + r 76 -6.8 -4.54047 | CTTGATCTCACCGGT GCCT GCC AGGC TTTTCTATGAACTGG HRM2_43380 4868111 - 4866696 - | dehydrogenase TERM 5497 4868197 - 4868169 - R 73 -5.9 -4.53303 | TAGCCCTATACAAAA TATTCCGGTTCCC GCC GCGTACCGGTATA CCCAACCTCCAGTTC HRM2_43390 4868980 - 4868159 - | 4Fe-4S iron-sulfur binding protein (ferredoxin) TERM 5498 4868367 - 4868384 + g 70 -4.9 -4.65933 | gap 1, opp_overlap 4868362, overlap 4868371 TCTGAGCAAAGCTTG CAGTCGAT GCA ATCG-CTG TTTGTTTTGGGGGTA TERM 5499 4868945 - 4868963 + g 73 -3.1 -4.96427 | overlap 4868947 4868951 TTCAGTTGTTCCTGT TGCGCTG AAATA CAGTGTA TTTATTTTCTTGTTC TERM 5500 4868951 - 4868967 + g 70 -2.3 -4.92757 | overlap 4868947 4868945 TGTTCCTGTTGCGCT GAAATAC AGT GTATTTA TTTTCTTGTTCATCA HRM2_43400 4870173 - 4869181 - | putative hydrolase or acyltransferase family protein (alpha/beta hydrolase superfamily) HRM2_43410 4870706 - 4870254 - | hypothetical protein nox3 4872294 - 4870966 - | Nox3 TERM 5501 4872125 - 4872140 + gr 73 -9 -3.46563 | AGTACGGTTACAGGC GCCATG GGGT CATGGC TTCTGATGGTATGTG HRM2_43430 4872724 - 4872218 - | 4Fe-4S iron-sulfur binding protein (ferredoxin) cdh2 4874640 - 4872760 - | Cdh2 TERM 5502 4874425 - 4874403 - G 77 -9.9 -3.78934 | opp_overlap 4874402 4874403 TTCTGGCCACAATAA TGTCTGCGG TTGCG CCACAGACA CCTTTTTTAGGTCCG TERM 5503 4875090 - 4875069 - H 87 -4.5 -5.47399 | gap 1, opp_overlap 4875069 TTAATTTTAAAAAAA GATTCATCCT GTA AGGA-GAACC GTGTTGTGAATATTG HRM2_43450 4875096 - 4876250 + | putative 2-hydroxyglutaryl-CoA dehydratase, beta subunit TERM 5504 4876925 - 4876946 + G 74 -6.5 -4.32067 | opp_overlap 4876925 4876924, overlap 4876921 4876926 GCCGGCATGATCAAC CGGGTCTCA TCCC TGGGACCCA TTGTTTTCTCAGGTG TERM 5505 4876926 - 4876945 + G 70 -10 -3.18517 | opp_overlap 4876925 4876924, overlap 4876925 4876921 CCGGCATGATCAACC GGGTCTCA TCCC TGGGACCC ATTGTTTTCTCAGGT hgdC2 4876331 - 4877101 + | HgdC2 HRM2_43470 4879471 - 4877123 - | putative Di- and tricarboxylate transporter TERM 5506 4877693 - 4877708 + g 71 -7.5 -4.07568 | opp_overlap 4877702 CGCCACCATGATGAC GGCGG CAAACC CCGCC TTTTCCAGGCGGGGG TERM 5507 4877722 - 4877702 - G 89 -14 -3.54741 | opp_overlap 4877693 GATGACGGCGGCAAA CCCCGCCT TTTCC AGGCGGGG GGCCTGCACAGCCGC TERM 5508 4878757 - 4878722 - G 100 -8.8 -5.252 | overlap 4878735 CACGGTGACAAAAAA GGCCGAACCCAAACGG CTCT CGGCCAGGGTACGGCC GGCCAGGGTCGATCC TERM 5509 4879510 - 4879544 + r 85 -7.2 -4.82855 | opp_overlap 4879512, overlap 4879511 4879512 TGCGTACAATAAAGT AAGCGTTTTACCTATA AGT TTTAGGTAAAACGCAG TTTTTAGGTTTCCTG TERM 5510 4879511 - 4879543 + r 83 -10.7 -3.48629 | opp_overlap 4879512, overlap 4879510 4879512 GCGTACAATAAAGTA AGCGTTTTACCTATA AGT TTTAGGTAAAACGCA GTTTTTAGGTTTCCT TERM 5511 4879512 - 4879542 + r 95 -14.2 -2.68093 | opp_overlap 4879512, overlap 4879511 4879510 CGTACAATAAAGTAA GCGTTTTACCTATA AGT TTTAGGTAAAACGC AGTTTTTAGGTTTCC TERM 5512 4879542 - 4879512 - R 100 -14.2 -3.72784 | opp_overlap 4879512 4879511 4879510 CGTACAATAAAGTAA GCGTTTTACCTATA AGT TTTAGGTAAAACGC AGTTTTTAGGTTTCC HRM2_43480 4880745 - 4879651 - | hypothetical protein TERM 5513 4880709 - 4880688 - G 78 -5.8 -4.83615 | GATCCGGCATAAAAA CCGGGTCA CTCAAT TGACCGGG CTGAAAACGTGAAAG TERM 5514 4880808 - 4880782 - R 93 -4.4 -5.82388 | overlap 4880784 AAATTTTAAAAAAAA GACCCTCAAAAT AAA AATTTAAGGGAC ACGGATCGTAAATTT TERM 5515 4880806 - 4880784 - R 73 -5.6 -4.53853 | overlap 4880782 ATTTTAAAAAAAAGA CCCTCAAAAT AAA AATTTAAGGG ACACGGATCGTAAAT leuD2 4881601 - 4880957 - | LeuD2 TERM 5516 4881273 - 4881256 - G 86 -5.5 -5.27335 | opp_overlap 4881255 4881270, overlap 4881259 TGTTGGAAAGAAAAA TATCCGC AAAG GCGGGTA ATCGTTTCTCACCGA leuC2 4883053 - 4881644 - | LeuC2 aroC3 4884213 - 4883125 - | AroC3 TERM 5517 4883347 - 4883331 - G 84 -10.9 -4.11394 | overlap 4883334 4883335 AGGCGACCCGGAAAA CAATGGG CTC CCCATTG GAAATCCCACCTTGG TERM 5518 4883344 - 4883334 - G 71 -6.8 -4.18506 | overlap 4883331 4883335 CGACCCGGAAAACAA TGGG CTC CCCA TTGGAAATCCCACCT TERM 5519 4883554 - 4883538 - G 70 -4.3 -4.74801 | overlap 4883539 CAAGCTTATCAAAAA CGGGCTC TCC AAGCCCT GGGGGAACATTCCTG HRM2_43520 4885446 - 4884952 - | RsbW HRM2_43530 4885744 - 4885400 - | putative Anti-anti-sigma regulatory factor glpV 4888281 - 4885822 - | GlpV TERM 5520 4885868 - 4885925 + g 100 -2.8 -5.94713 | gap 3, opp_overlap 4885878 4885897, overlap 4885868 4885870 4885871 CAGATGAGGTGGTTA TAAT-CGGAA-ATGGCCCGGTCGCTGGAA AAT TTCCCG-GACCGGGCCACATTCAGGATCG TTTTTTTTGTCCAAT TERM 5521 4885913 - 4885878 - G 100 -18.4 -3.69354 | gap 1, opp_overlap 4885871 4885870 4885868 4885868, overlap 4885897 GGTTATAATCGGAAA TGGCCCGGTCGCTGGAA AAT TTCCCG-GACCGGGCCA CATTCAGGATCGTTT TERM 5522 4887916 - 4887899 - G 73 -9.1 -3.79668 | gap 1, opp_overlap 4887909 4887911, overlap 4887901 ATGGAATCGAGGAAA CAGGCCGC CAG GCGGCC-G AGCCCGCCGTTTCCA TERM 5523 4887915 - 4887901 - G 82 -12.8 -3.48105 | opp_overlap 4887909 4887911, overlap 4887899 GGAATCGAGGAAACA GGCCGC CAG GCGGCC GAGCCCGCCGTTTCC HRM2_43550 4892096 - 4888278 - | putative two-component system sensor protein TERM 5524 4888939 - 4888917 - G 70 -9 -3.56099 | opp_overlap 4888909 4888929 4888936, overlap 4888908 CATAAGCGCTGGAAA CGGCTTCTCC TCC GGGGATGCCG GGACGACAGCGCCGC TERM 5525 4889794 - 4889761 - G 71 -6.8 -4.19506 | opp_overlap 4889768, overlap 4889779 AGGGTAACGTCAAAA GAGAAACATTCCAG CATACT CTGGAAAATTTCCC GGGAAGTTGCATTGT TERM 5526 4891745 - 4891755 + g 70 -4.6 -4.63527 | TAGGCGAAGCAGCGT CGGT CAG GCCG TTTTTGCAGTGGTAA HRM2_43560 4893387 - 4892197 - | putative chemotaxis response regulator HRM2_43570 4893577 - 4893398 - | hypothetical protein HRM2_43580 4894783 - 4893650 - | hypothetical protein TERM 5527 4894342 - 4894330 - G 100 -10.5 -5.58179 | CATCAGAATAAAAAA CCCGG GTA CCGGG TTGCGCAGAAAGTTT TERM 5528 4894597 - 4894570 - G 70 -3.4 -4.77896 | opp_overlap 4894571 4894575, overlap 4894571 CAACCAACTTAAAAA CCAGAGGCAATG TCAC CATTACCTTTGT TATGGACTCAATATT TERM 5529 4895292 - 4895274 - H 100 -4.6 -6.04419 | AAAAGAATAAAAAAA GACACAAA AGG CTTGTATC TTTATTAAAAAAAGG HRM2_43590 4895428 - 4896915 + | Acetyl-CoA hydrolase TERM 5530 4896908 - 4896890 - T 71 -9.6 -2.9856 | overlap 4896889 GAAATTTTAAAGAAT TTGGGGAA ATG CTCCCCAA CTGCTGACTGGAAAG HRM2_43600 4897758 - 4897009 - | putative Metal-dependent hydrolase TERM 5531 4897692 - 4897681 - G 71 -5.8 -4.33739 | CAAAAAAGCCGAAAA TCCC CAGA GGGA AGTGAGATCCGGATT HRM2_43610 4898085 - 4898540 + | hypothetical protein HRM2_43620 4899062 - 4898526 - | hypothetical protein TERM 5532 4898691 - 4898713 + g 76 -7 -4.54047 | opp_overlap 4898691 TTCTGGGTCATGGAA TGGTGAACGA GGA TTGCTCACCA TTTTATCTGCCATGA HRM2_43630 4901175 - 4899076 - | methyl-accepting chemotaxis protein TERM 5533 4901224 - 4901214 - R 71 -3.2 -4.93547 | TCAATGAACTAAAAA CCAA CTT TCGG ACCTCAGTTTTGATA HRM2_43640 4905125 - 4901583 - | hypothetical protein TERM 5534 4905536 - 4905526 - H 73 -8.2 -3.62864 | opp_overlap 4905533 4905535 GAAACGCACTTCAAA CCGG CAG CCGG AAACGGGTGTTACCC TERM 5535 4906094 - 4906106 + H 78 -10.5 -3.28791 | GGCAGATACCATGCT CCGGC CAT GCCGG TTATAGAAAACGCAT TERM 5536 4906471 - 4906483 + G 88 -10.5 -4.16943 | opp_overlap 4906465 AAAAATGATGGGCGT GGCCG TTG CGGCC TTTTACAGTCTGGCA TERM 5537 4907038 - 4907060 + G 79 -12.1 -3.23638 | overlap 4907054 ACACAATAAGGGGTT TCTTGCCCT TCAGC AGGGCAAGA TTGATGCCTATTTCA gltI 4906451 - 4907353 + | GltI TERM 5538 4907415 - 4907385 - f 100 -11.1 -5.08088 | gap 1 AAGGTTCAACAAAAA GCCGGGGCCGACCA CGGA TGAACG-CCCCGGC TGCACAGGAGTATTT TERM 5539 4908077 - 4908093 + G 78 -13.7 -2.62616 | CTACCTGACCATTGC CCAGGGC GTG GCCCTGG TGATGTGGCGCATCG gltJ2 4907430 - 4908152 + | GltJ2 gltK2 4908154 - 4908819 + | GltK2 TERM 5540 4909157 - 4909134 - g 72 -8.1 -3.94933 | TGAAGGTTAAAAAGA TGTCCCGGG TCAAGG CCCGGGAAA AGGCGCTGGCCCTGC gltL2 4908812 - 4909558 + | GltL2 HRM2_43690 4909645 - 4910469 + | putative metal-dependent hydrolase HRM2_43700 4912379 - 4910784 - | transposase TERM 5541 4910851 - 4910877 + g 71 -7.2 -4.07568 | opp_overlap 4910851 AACAAGGCTTTATAA TCTGCCTCAGTC ATG GCCTGGGGAAGA TTTTCAAAAAGGAAG TERM 5542 4911645 - 4911657 + g 76 -6.3 -4.62471 | CTGGATTAATGGTCC CGAAA GGA TTTCG TTTTTGAGCATTGCA HRM2_43710 4912777 - 4912424 - | transposase HRM2_43720 4913124 - 4912777 - | hypothetical protein HRM2_43730 4914291 - 4913230 - | hypothetical protein HRM2_43740 4914932 - 4914465 - | hypothetical protein pacL 4916173 - 4915121 - | PacL TERM 5543 4916865 - 4916853 - g 100 -5.5 -5.7946 | overlap 4916854 GCCTTAAGAAAAAAA CGCAG GAA CTGCA TAAAAGCCTTAATGG TERM 5544 4917259 - 4917242 - g 86 -2.7 -5.5604 | gap 1 GCAATCAAGAAAAAA GGCTCTTA TTA CAAG-GCC AAATATTACAAACTG HRM2_43760 4916222 - 4917478 + | transposase for insertion sequences IS116, IS110 and IS902 (IS111A/IS1328/IS1533 family protein) pma1 4919479 - 4917779 - | Pma1 TERM 5545 4919135 - 4919151 + g 85 -3.7 -5.47821 | ACCCCTTAGGACTTG TGCATAT GGA ATCTGCA TTTTTTTCAATGCCT TERM 5546 4919684 - 4919695 + H 75 -2.2 -5.34655 | GTCCGTGTACAAGGG GCTT GTTG GAGC TTTTATTTTTGCTTG HRM2_43780 4919759 - 4919974 + | hypothetical protein HRM2_43790 4921127 - 4920471 - | hypothetical protein HRM2_43800 4922095 - 4921130 - | putative Beta-propeller domains of methanol dehydrogenase type TERM 5547 4921389 - 4921372 - GR 76 -2.7 -5.13016 | gap 1 AACCAAAATTAAAAA CCATGCCC CAA AGG-ATGG GAAAAAGGATCCCCC TERM 5548 4921554 - 4921566 + gr 70 -7.7 -3.60296 | opp_overlap 4921545 4921553, overlap 4921548 4921546 AATTCACCATGAACC GCATG GAT CATGC TTTGAACTCCAGCTA HRM2_43810 4922645 - 4922055 - | lemA family protein TERM 5549 4922433 - 4922443 + gr 86 -6.8 -4.91852 | opp_overlap 4922432 4922433 CCGAGCCTCAATAAC CGCT TCA AGCG TTTCTTTTTCATGGG HRM2_43820 4923384 - 4923055 - | hypothetical protein HRM2_43830 4924096 - 4923728 - | putative ferredoxin TERM 5550 4923820 - 4923810 - G 91 -5.4 -5.52384 | opp_overlap 4923810 TTTTTAGTAAAAAAA CGTT GCA AACG TTCAATAAGCTGTTT TERM 5551 4924704 - 4924690 - R 82 -5.8 -5.04175 | overlap 4924695 TCAACTATATAAAAA TATGAT ATT ATCATA ATAGTCATAACCTTA HRM2_43840 4926398 - 4924752 - | methyl-accepting chemotaxis protein HRM2_43850 4928098 - 4926959 - | Glucose/sorbosone dehydrogenase TERM 5552 4927630 - 4927642 + g 72 -4.1 -4.83169 | AGTAATGGCCGTTGC CCGAA ACT TTTGG TTTTTGTCGCCAGAT HRM2_43860 4928847 - 4928290 - | putative amidase HRM2_43870 4930012 - 4928903 - | hypothetical protein TERM 5553 4929653 - 4929677 + g 86 -5.8 -5.09204 | opp_overlap 4929653, overlap 4929672 AAATGTTTCAATCCA TTCCCAAC CGTCCAGAA GTTGGGAA TTTTTATTCCGATCT HRM2_43880 4931105 - 4930194 - | homocysteine S-methyltransferase TERM 5554 4930685 - 4930669 - G 78 -9.5 -3.95584 | GGTTCATCAATTAAA CTTTGTG TTT CACAAAG CCATAAATCTACATA TERM 5555 4930816 - 4930798 - G 70 -8 -3.724 | opp_overlap 4930799 4930806 AACGGAGGAATAGAA CCGGCAAC CCG GACGCCGG TTTGGGTTTCAGTGA TERM 5556 4930806 - 4930816 + g 72 -8.2 -3.85909 | opp_overlap 4930798, overlap 4930799 AATAGAACCGGCAAC CCGG ACG CCGG TTTGGGTTTCAGTGA HRM2_43890 4931591 - 4931358 - | hypothetical protein TERM 5557 4931688 - 4931676 - R 78 -10.5 -3.30007 | AATAGGTCTGTATAA CCGGC ACG GCCGG AGCGAGGTATGGCTT HRM2_43900 4932266 - 4931784 - | hypothetical protein TERM 5558 4932066 - 4932079 + g 84 -2.3 -5.61596 | overlap 4932062 TGCCTCAATTTCCTG GACCT GCTC AGGCC TTTTTTTATCCACAT HRM2_43910 4932621 - 4932472 - | transposase TERM 5559 4932511 - 4932500 - G 82 -3.6 -5.26316 | CCAGGGGACAAAAAA CCGA AGCG CCGG ATTTTTTTGAATCCC HRM2_43920 4933266 - 4932649 - | putative methyltransferase HRM2_43930 4934168 - 4933350 - | hypothetical protein TERM 5560 4933760 - 4933773 + g 73 -3.1 -5.0538 | gap 1, opp_overlap 4933754 4933753 4933755 GAAACAAACCGACCA TG-CCG ACC CGGTCA TTTTTTGAGATGGAC HRM2_43940 4934659 - 4934276 - | hypothetical protein HRM2_43950 4935125 - 4934706 - | hypothetical protein HRM2_43960 4936873 - 4935275 - | putative Kef-type K+ transport system, membrane component TERM 5561 4935791 - 4935771 - G 74 -9.9 -3.5774 | ATCGAAGTCTCGAAA TATTTCAGA TGA TCTGAAATA CGCGCATATATTTTG TERM 5562 4936030 - 4936017 - G 74 -2.3 -5.1471 | AGGATAAAAAACAAA CCGGT CTTG AACGG CATGATCAGAGCCAG TERM 5563 4936982 - 4936948 - R 100 -13.7 -4.64952 | AACCAGACAAACAAA GCAATTGTCCCTGCA AAGAA TGCAGGAACGATTGC CCACTGCGATTGTGG HRM2_43970 4938144 - 4937260 - | methionine synthase I, cobalamin-binding domain protein TERM 5564 4938310 - 4938281 - R 83 -11.5 -3.03243 | gap 1, opp_overlap 4938296 ATGTATTTTTCAAGA CGCAGGTCCCTACA CGG TGC-GAGACCTGCG CGCAACATTTAAATG TERM 5565 4939178 - 4939190 + r 74 -10.5 -2.68823 | overlap 4939181 GAGCCATACCTCGTT CCGGC CGT GCCGG CTTATATCAGAACGA TERM 5566 4939181 - 4939191 + r 71 -8.2 -3.48395 | overlap 4939178 CCATACCTCGTTCCG GCCG TGC CGGC TTATATCAGAACGAT TERM 5567 4939275 - 4939289 + r 70 -7.1 -3.76952 | AATTCCCCATGAATC CTGGG CGCAC CCCAG TTTGGATTGGCTGCA TERM 5568 4939506 - 4939519 + r 70 -2.5 -5.03314 | CCCATAGCTGTCCTT TAAAA TGGA TTTTA TTTTTTAGCGCTCAG HRM2_43980 4943632 - 4939517 - | hypothetical protein TERM 5569 4940510 - 4940530 + g 87 -4.7 -5.38054 | gap 1, opp_overlap 4940510, overlap 4940503 ATACCCTTGAAAAAT CTGGCTCG CAATTT CG-GCCAG TTTTTCTTTATAGAC TERM 5570 4942420 - 4942436 + g 86 -8.7 -4.56597 | AATACTGGTCAATGC TGGGACC GTT GGTTCCA TTTTTACCCACCCCA TERM 5571 4942575 - 4942585 + g 74 -4.6 -4.79756 | overlap 4942549 4942548 4942582 TCCTCCCCAGGTTGG CTCG TAC CGGG TTTTTCCGTTCTCTC TERM 5572 4942887 - 4942874 - G 70 -3.1 -4.89063 | GTAGTTAAAAACAAA TCCAG GATC CTGAA AATGGGTATGTTCGA HRM2_43990 4944430 - 4943816 - | putative pyridoxamine-phosphate oxidase HRM2_44000 4945069 - 4944608 - | hypothetical protein mazF 4945391 - 4945053 - | MazF HRM2_44020 4945642 - 4945409 - | hypothetical protein HRM2_44030 4946178 - 4945915 - | putative plasmid maintenance system antidote protein HRM2_44040 4950042 - 4946509 - | hypothetical protein TERM 5573 4946922 - 4946933 + g 81 -5.8 -5.01732 | opp_overlap 4946909, overlap 4946909 AACCGTCAGAGGCTG CCAG TTGT CTGG TTTTTTCAGCGGCTT TERM 5574 4949267 - 4949286 + g 84 -4.2 -5.23316 | AGAGAATCGCCATCT GCAGCCAG GCCT TTGGATGC TTTTTTCCTATGATC TERM 5575 4950356 - 4950366 + r 71 -3.2 -4.95806 | GGTTTGTCTTTGATC CACT GGT GGTG TTTTTATGATCATTT TERM 5576 4950446 - 4950430 - R 85 -2.3 -5.75342 | overlap 4950432 TCCTTTTAAAAAAAA TTTATCA GAC TGATACA AAGAAAGTTTTATAG HRM2_44050 4951617 - 4950508 - | transposase TERM 5577 4951563 - 4951581 + g 71 -5.2 -4.56775 | overlap 4951548 4951565 4951572 TTCCCTGGCCGTTTT TCCAGGGG ATT TCCCTGAA TTTTTCCGGCGAAAT ftcD2 4953251 - 4951635 - | FtcD2 TERM 5578 4951925 - 4951953 + g 100 -11 -5.42259 | gap 1 GAATGGCGGTCTTAA GGCCGGCCT-GCA TCTT TGCCAGGCGGGCC TTTTTTTCGGCCTCA TERM 5579 4952901 - 4952887 - G 95 -5.7 -5.42514 | overlap 4952893 TCATAAAGGAAAAAA GGAAC ACCCA GTTCC TCGGCCGCCAGTTGG TERM 5580 4953412 - 4953439 + r 80 -3.5 -5.37345 | opp_overlap 4953412 4953413, overlap 4953412 4953413 ATGTTTGGCCGTAAA T-CCGCTGCAGGT TACC ACCTG-GGCGGCA TTTTTTATGATTAAA hutU2 4955574 - 4953541 - | HutU2 TERM 5581 4954282 - 4954297 + g 70 -4.6 -4.61231 | overlap 4954284 AAAAATAAAGCCGTC CAGGGT ATTG ACCCCG TTTTTACAAATCTGG TERM 5582 4954616 - 4954641 + g 83 -3.2 -5.41143 | CCGTGGAAGGCGATG GCCAGGGC CTTTTTTTCT GCCATGGC TTTTTTTGCAGCATC HRM2_44080 4957585 - 4955726 - | tungsten-containing aldehyde ferredoxin oxidoreductase TERM 5583 4956254 - 4956237 - G 71 -7.7 -4.09243 | TATACGCTGGTAAAA TCCCCTC CCCT GAGGGAA ACCGTATAGGAGAGG TERM 5584 4956722 - 4956735 + g 95 -2.3 -6.07627 | opp_overlap 4956715, overlap 4956710 4956707 4956708 GCAATGCACCGGGCA CCGGT GACA GCTGG TTTTTTTTTCGACAT TERM 5585 4957651 - 4957609 - R 82 -8.5 -4.36914 | gap 2, overlap 4957614 CCCCCTTCTATAAAA GAT-CAC-CCAGGGCCTAGCT TTC AGCCAGGGCCCGGAGCGCATC CGCCAATTGGTCTTC TERM 5586 4957644 - 4957614 - R 86 -11.8 -2.98387 | overlap 4957609 TTCTATAAAAGATCA CCCAGGGCCTAGCT TTC AGCCAGGGCCCGGA GCGCATCCGCCAATT mttB7 4959259 - 4957802 - | MttB7 hutC 4960065 - 4959286 - | HutC TERM 5587 4959459 - 4959486 + g 71 -10.6 -3.1332 | gap 1, overlap 4959449 TGATCTCCAGCAACT GCTGGGTCTGTTC ATC GGGCAGACCC-GC TTCAATAATATGTTC HRM2_44110 4960196 - 4960065 - | predicted by Glimmer/Critica TERM 5588 4960204 - 4960222 + r 70 -5.3 -4.45738 | gap 1, overlap 4960204 4960205 TGGCCCACGCATTTA T-CCCCCT TTAT AGGGGGCA TTTCTTGTTCAACTG TERM 5589 4960205 - 4960220 + r 73 -10.4 -2.55309 | overlap 4960204 4960204 GGCCCACGCATTTAT CCCCCT TTAT AGGGGG CATTTCTTGTTCAAC hutH 4961775 - 4960231 - | HutH TERM 5590 4960395 - 4960407 + g 91 -3.3 -5.82316 | overlap 4960383 4960382 CCCGGGTGCCAAGCC CCCCT TTC ATGGG TTTTTTTTCGGTGAT mttB8 4963232 - 4961787 - | MttB8 TERM 5591 4962241 - 4962194 - G 71 -5.6 -4.58395 | gap 1 TGGACCCCGCAAAAA CGGACATGAAGGCTTCC-AGG CCGGCTT CATAGGATGCCTGCATATCCG GAATCGGGGCATCAC TERM 5592 4962644 - 4962662 + g 70 -8.8 -3.63968 | TTTCCCGCAATTGTT GTTCTCCG CCC CGGAGCAC TTTGGAGATTTCCCA HRM2_44140 4964259 - 4963318 - | ABC-type transport system; permease component TERM 5593 4963820 - 4963800 - G 74 -2.5 -5.08824 | overlap 4963817 GTTTGATGGAAAAAA CCGATACCA GGA TAACACCGG TCACAAATTCCGGCA HRM2_44150 4966334 - 4964256 - | ABC-type transport system; ATPase component TERM 5594 4964359 - 4964389 + g 79 -11.1 -3.53761 | overlap 4964354 4964360 4964375 CAGATGCTGTGGCCA TCCAGGCCTTCCT GCTGG GGGGGGGCCTGGG TTTCACACAGGCTTC TERM 5595 4964360 - 4964388 + g 74 -12.4 -2.72043 | overlap 4964354 4964359 4964375 AGATGCTGTGGCCAT CCAGGCCTTCCT GCTGG GGGGGGGCCTGG GTTTCACACAGGCTT TERM 5596 4964375 - 4964409 + g 93 -14.2 -3.85698 | overlap 4964360 4964359 CCAGGCCTTCCTGCT GGGGGGGGGCCTGGGT TTC ACACAGGCTTCCCCGC TTTCTCGGACACCGG HRM2_44160 4967257 - 4966331 - | ABC-type dipeptide transport system; permease component TERM 5597 4967142 - 4967152 + g 70 -8.2 -3.74347 | overlap 4967130 ATGGCCAGGGGATTT CGCC CCA GGCG TTTCAAGTTTGTGCG HRM2_44170 4968837 - 4967329 - | ABC-type dipeptide transport system; periplasmatic component TERM 5598 4967854 - 4967868 + g 71 -5.6 -4.57073 | overlap 4967856 AGCCTTTGCCTTTTC CAGGTC CAT GACCGG TTTTTCAACCAGGTG TERM 5599 4968144 - 4968162 + g 77 -12.4 -3.12351 | opp_overlap 4968140 4968144 CGCCCACAAAATCCA GCTCTCCG CCC CGGAGGGC TTCGATCTGACCACC TERM 5600 4968212 - 4968200 - G 83 -2.7 -5.49579 | GGAGAAAAAATAAAA TGAAT TTC ATCCA GGTTGACCTTGCCTT TERM 5601 4968883 - 4968871 - H 71 -3.3 -5.0133 | GATGGGTTTAAAAAA GCCGT GTT AGGGC ACAATATATCCAACT TERM 5602 4968929 - 4968945 + H 71 -6.6 -4.16943 | TCCCTCATTTTTTTT TGGGTT ATGTA AACCCA TTTTCCGGTCTCAAA HRM2_44180 4970075 - 4970761 + | transcriptional regulator mttB9 4972555 - 4971086 - | MttB9 TERM 5603 4971352 - 4971339 - G 74 -2.3 -5.14563 | overlap 4971340 TTCTGGACCAAAAAA TGACC GCCC GGTCC GACATCTTCTATGAT TERM 5604 4972392 - 4972405 + g 72 -8.1 -3.8572 | TTGTTTTCCTTCACC CAGGC ACCT GCCTG TTTCATCATCTTGTG TERM 5605 4972993 - 4973046 + H 74 -7.7 -4.07537 | gap 1, overlap 4973038 AAGTAGGAATGAAGG GTGCCCAT-TTTTTGCTTATGTTGTT CAC AACAATATAAGTGGAAGCAGGGGCGC TTGTTTGAGTTTCTT TERM 5606 4973060 - 4973079 + H 82 -8 -4.47456 | GCTTGTTTGAGTTTC TTTGCAAT AAAA ATTGCAAA TTTATTATTCACTGT TERM 5607 4973100 - 4973126 + H 85 -9.4 -4.18762 | opp_overlap 4973100, overlap 4973109 TATTCACTGTGAAAA GGAAATTCCCCC GGG GGGCGGGTTTCC TTTTCAGTCCAGCTT HRM2_44200 4973254 - 4973595 + | hypothetical protein TERM 5608 4973625 - 4973638 + F 78 -9.5 -3.72576 | AAGGTTTAATAGCTC GGCCC TATT GGGCC TTTGATGCAACGCAG mttB10 4973736 - 4975175 + | MttB10 HRM2_44220 4975480 - 4975217 - | hypothetical protein HRM2_44230 4976309 - 4975920 - | hypothetical protein gph2 4977159 - 4976506 - | Gph2 HRM2_44250 4977797 - 4977264 - | acetyltransferase (GNAT family protein) HRM2_44260 4978063 - 4977794 - | hypothetical protein TERM 5609 4978161 - 4978143 - R 75 -8.9 -3.61517 | ACGCCTTGTCAATAA GTACGGA ATTGG TCCGTAC AAAAACTGTGGTTTG HRM2_44270 4980440 - 4978722 - | transposase (IS4 family protein) TERM 5610 4980589 - 4980579 - g 74 -6.8 -4.41895 | overlap 4980584 AATGGCCAACGAAAA CCCA ACA TGGG GAGCCCCGCGCATCC HRM2_44280 4980565 - 4981104 + | transposase (IS3 family protein) TERM 5611 4981140 - 4981157 + F 90 -4.1 -5.62288 | TATTCTTCCTGGTTT GAAGATG TACC CTTCTTC TTTTTATTTTCTTCC HRM2_44290 4981288 - 4981800 + | hypothetical protein HRM2_44300 4982209 - 4982607 + | hypothetical protein HRM2_44310 4982908 - 4983279 + | hypothetical protein TERM 5612 4983493 - 4983510 + G 74 -9.9 -3.61715 | opp_overlap 4983492 4983491 AGGTTATCAACAATC TGTCTCC AATT GGAGACA TTCTTCCCAACAATG HRM2_44320 4983279 - 4983860 + | hypothetical protein TERM 5613 4983954 - 4983937 - gf 80 -2.6 -5.52023 | overlap 4983938 ATCATGAACAAAAAA GGCTCG GCCAAA CGAGCA AGTAAAAAATATTAC TERM 5614 4984003 - 4983989 - gf 86 -5.6 -5.28683 | opp_overlap 4984002 ATCAATATCAAAAAA CCGGCA TTA TTCCGG GGCCACTCCTACTTG TERM 5615 4985281 - 4985265 - gf 76 -5.1 -4.83169 | ATTGCCGGACAAAAA TGAGCTG GAT CAGATCA TCGCCTTTTTGGAGC TERM 5616 4985377 - 4985347 - gf 80 -2.4 -5.47914 | AAAAATTATAAAAAA GGTCTTTCCATGCC CAT GGCAAAGCAAATCC TTCAGCATAACCAGA HRM2_44330 4983847 - 4985535 + | hypothetical protein HRM2_44340 4985459 - 4986205 + | hypothetical protein TERM 5617 4986331 - 4986362 + F 100 -11.1 -5.27938 | gap 1, opp_overlap 4986328 4986333 4986335 ATAATTAAATCAGGA TAGACCATTACGCT TTTTT AGCG-AATGGTCTA TTTTTGTTTACAACT TERM 5618 4986360 - 4986333 - f 71 -9.3 -2.90456 | gap 1, opp_overlap 4986331, overlap 4986328 4986335 AATTAAATCAGGATA GACCATTACGCT TTTTT AGCG-AATGGTC TATTTTTGTTTACAA istA3 4986740 - 4988212 + | IstA3 TERM 5619 4988314 - 4988295 - gf 71 -5 -4.57569 | opp_overlap 4988298, overlap 4988298 GCAGCCGCTCAAAAA CAATGGAC CCAT GTCCATTT TTTATCAGAATTGAT TERM 5620 4988311 - 4988298 - gf 74 -6.7 -4.40561 | opp_overlap 4988298, overlap 4988295 GCCGCTCAAAAACAA TGGAC CCAT GTCCA TTTTTTATCAGAATT TERM 5621 4988298 - 4988311 + GF 100 -6.7 -5.25803 | opp_overlap 4988298 4988295 GCCGCTCAAAAACAA TGGAC CCAT GTCCA TTTTTTATCAGAATT istB2 4988205 - 4988726 + | IstB2 HRM2_44370 4988686 - 4988940 + | putative ATP-binding family protein TERM 5622 4988947 - 4988982 + T 100 -10.4 -4.60041 | gap 1, opp_overlap 4988944 4988943, overlap 4988948 ACTGAATAAATCTTA TGGCCGGCAGA-CCC AAAAAAA GGGATCCGCCGGCCG TTTTTAAACATACAT TERM 5623 4988948 - 4988981 + T 86 -11.7 -3.35542 | gap 1, opp_overlap 4988944 4988943, overlap 4988947 CTGAATAAATCTTAT GGCCGGCAGA-CCC AAAAAAA GGGATCCGCCGGCC GTTTTTAAACATACA HRM2_44380 4990267 - 4989419 - | integrase/recombinase family protein TERM 5624 4989472 - 4989509 + g 72 -10.1 -3.42976 | gap 1, overlap 4989459 4989470 TATGTGGGTCATCCA CG-TTTGGTCGACTATTT TTC AGATAGTCGGCTAAAGCG TATTTCAACTCTTTT TERM 5625 4990481 - 4990509 + r 70 -7.4 -3.74626 | opp_overlap 4990480 GTGACTGAAGTATAG GGGCAGTGAG ATTACACCA CGCACTGCCC TTTCCATACTTTGGT istA4 4991441 - 4990593 - | IstA4 HRM2_44400 4991745 - 4991422 - | transposase family protein HRM2_44410 4991932 - 4991675 - | hypothetical protein HRM2_44420 4992822 - 4992520 - | hypothetical protein HRM2_44430 4993466 - 4992924 - | hypothetical protein HRM2_44440 4995280 - 4993457 - | hypothetical protein TERM 5626 4993572 - 4993601 + g 91 -2.9 -5.82281 | opp_overlap 4993576, overlap 4993574 4993576 GGGGAATAATATGCT AAGACAGGTTTTA AATA TAAAACTTGACTG TTTTTTTCTATGTTT TERM 5627 4993574 - 4993599 + g 71 -5.5 -4.51477 | opp_overlap 4993576, overlap 4993572 4993576 GGAATAATATGCTAA GACAGGTTTTA AATA TAAAACTTGAC TGTTTTTTTCTATGT TERM 5628 4995471 - 4995451 - H 76 -7.6 -4.18401 | gap 1 TGATATACCGGAAAA GGC-GATGC CAAC GCATCCGCC ATTGACCAGTTACTT xerD4 4995504 - 4996265 + | XerD4 hmrR3 4996247 - 4996417 + | HmrR3 TERM 5629 4997095 - 4997079 - g 70 -4.3 -4.62069 | overlap 4997080 TGTTCATTGCAAAAA CGTCGGC AAC GGCGACA AGGCCATCATCTATC TERM 5630 4997235 - 4997219 - g 81 -5.7 -5.06052 | overlap 4997220 CTAAAAAATACAAAA CCCGGAC CGT GACCGGA GAAAAATTTCTTTAT HRM2_44470 4996546 - 4997478 + | transposase for insertion sequence 801 (transposase 32 family protein) HRM2_44480 4998486 - 4997803 - | hypothetical protein TERM 5631 4998104 - 4998118 + g 78 -3.6 -5.20333 | overlap 4998105 GTATAAATAGAATGC TCATTT GGT AAATGG TTTTTGTTGTAAGTA TERM 5632 4998527 - 4998546 + r 93 -4.3 -5.7946 | gap 1, opp_overlap 4998527 4998528, overlap 4998527 4998528 4998530 CGCATAACACGAAAA T-CACCGG TTTAT CCGGTGCA TTTTTTTGTTGGAAA TERM 5633 4998545 - 4998527 - R 73 -5.9 -4.46656 | opp_overlap 4998527 4998527 4998528 4998530, overlap 4998528 CGCATAACACGAAAA TCACCGG TTTAT CCGGTGC ATTTTTTTGTTGGAA TERM 5634 4998528 - 4998544 + r 71 -9.4 -3.0287 | opp_overlap 4998527 4998528, overlap 4998527 4998527 4998530 GCATAACACGAAAAT CACCGG TTTAT CCGGTG CATTTTTTTGTTGGA TERM 5635 4998544 - 4998528 - R 74 -9.4 -3.27271 | opp_overlap 4998528 4998527 4998527 4998530, overlap 4998527 GCATAACACGAAAAT CACCGG TTTAT CCGGTG CATTTTTTTGTTGGA HRM2_44490 4999952 - 4998654 - | hypothetical protein TERM 5636 4999006 - 4998996 - G 70 -4.6 -4.61868 | TACGCATACATAAAA GACG ATC CGCC GCCAAAGCTGTCCCA HRM2_44500 5000272 - 4999952 - | putative DNA-binding protein TERM 5637 5000728 - 5000718 - g 70 -4.6 -4.72986 | TAGTCGCATTAAAAA GGAC CTG GCCC AAATGGATGGATGCA HRM2_44510 5000531 - 5001496 + | Tranposase TERM 5638 5001657 - 5001632 - T 89 -12.1 -3.29511 | opp_overlap 5001622 5001632 5001638 5001656, overlap 5001638 CTGATTTTTCGAGAA CGAAAATTTGA AAAT TCAAATTTTCG TATATCTGCGTCCTG TERM 5639 5001632 - 5001657 + T 86 -12.1 -3.01416 | opp_overlap 5001632 5001638, overlap 5001622 5001638 5001656 CTGATTTTTCGAGAA CGAAAATTTGA AAAT TCAAATTTTCG TATATCTGCGTCCTG HRM2_44520 5005268 - 5002002 - | DEAD/DEAH box helicase:helicase, C-terminal TERM 5640 5004960 - 5004991 + g 70 -8.6 -3.65991 | gap 1, opp_overlap 5004959 5004960 GGGAAGCAGAGTAAG CCGGGAGGCATGGGC AAA GCCCAC-CTGCCCGG TTATGTTCAGGCGAT HRM2_44530 5007130 - 5005265 - | hypothetical protein HRM2_44540 5008316 - 5007084 - | hypothetical protein HRM2_44550 5008603 - 5009940 + | hypothetical protein ubiE6 5010639 - 5010040 - | UbiE6 TERM 5641 5010780 - 5010731 - R 100 -13.8 -4.1523 | gap 2, opp_overlap 5010727 5010741 5010743 CTGATTACACATAAA CGCTGCTCTT-CTGCGG-TCGC GGCTTTTT GCGACCCGTAGCAAGAGCAGCG TTGGCAATTTTGATT TERM 5642 5010848 - 5010838 - R 78 -4 -5.20333 | GAGTTACAACAAAAA GATA GCC TATC CAGTAGATATTTTAC HRM2_44570 5011082 - 5010876 - | hypothetical protein HRM2_44580 5011338 - 5011072 - | transposase HRM2_44590 5011763 - 5011338 - | hypothetical protein HRM2_44600 5013189 - 5012227 - | hypothetical protein TERM 5643 5012574 - 5012564 - G 73 -3.2 -4.96435 | TTAACAAAAAAAGAA GACC CAA AGTC ACTCCCTCCTAAATT HRM2_44610 5013643 - 5013296 - | hypothetical protein HRM2_44620 5013731 - 5014078 + | hypothetical protein HRM2_44630 5014078 - 5014365 + | transposase TERM 5644 5014474 - 5014431 - f 74 -4.6 -4.89063 | gap 2 TGAGGGAAAAATAAA GGAGCCCCC-TC-ACGTTCT TTGGCC AGTTCGTCGATGGGAGCTCC TGCCACTATAACCCT TERM 5645 5014605 - 5014621 + G 70 -4.3 -4.61231 | overlap 5014606 AGCCGGTTGCCCTAT TGCGGGG GGC CGCTGCA TTTTTCCAACTATCA TERM 5646 5014656 - 5014674 + G 70 -4.5 -4.63184 | AAGCCTCGAGGTGGC CCTCCTG AACTG CAAGAGG TTTTTGAAATCCGTT HRM2_44640 5014504 - 5014782 + | hypothetical protein HRM2_44650 5014596 - 5015063 + | hypothetical protein TERM 5647 5016370 - 5016336 - g 77 -10.1 -3.69437 | gap 2, opp_overlap 5016335 5016355 5016363, overlap 5016294 TAACGCGAAAACCAA GACG-CAGCGAC-GCCA CAG TGGCCGTCGCCGGCATC CGTTATGAGTTGCCG HRM2_44660 5015225 - 5016673 + | integrase family protein TERM 5648 5017178 - 5017145 - g 74 -2.5 -5.09225 | gap 1, overlap 5017146 5017177 ATTTGACTCAAAAAA CCTGTTGTTTACCG TTTTATG CGGTG-ACAACAGA CTCCCAGAAAGGTTC TERM 5649 5017207 - 5017189 - g 75 -8.8 -3.89055 | overlap 5017177 5017190 ACAGACTCCCAGAAA GGTTCCGG TCG CCGGAACT GCTACCCCTTGGAAG TERM 5650 5017206 - 5017190 - g 76 -12.3 -2.92951 | overlap 5017177 5017189 CAGACTCCCAGAAAG GTTCCGG TCG CCGGAAC TGCTACCCCTTGGAA exeA5 5016666 - 5017511 + | ExeA5 TERM 5651 5017511 - 5017493 - f 91 -10.4 -4.07885 | opp_overlap 5017493 5017486 CAGGCCCCGGCAAAA TCAGAAAG ATC CTTTCTGA TTGATGGCTTGCTGA TERM 5652 5017493 - 5017511 + F 77 -10.4 -3.22884 | opp_overlap 5017493, overlap 5017486 CAGGCCCCGGCAAAA TCAGAAAG ATC CTTTCTGA TTGATGGCTTGCTGA TERM 5653 5017635 - 5017673 + F 100 -12.5 -4.70626 | gap 1, opp_overlap 5017632 5017635 TAATGCCCTAAATGA TG-GGGGAGGAGCGGTTA TTGA TTGCCGCTCCTCCTCGCA TTTTTACCATTATTC TERM 5654 5017727 - 5017739 + F 71 -9.1 -3.37245 | opp_overlap 5017724 AAAACCCAATACCCA TGCGC GTA GCGCA TTCATCTTCGGATCC TERM 5655 5018654 - 5018642 - g 76 -6.3 -4.62471 | TGCAATGCTCAAAAA CGAAA TCC TTTCG GGACCATTAATCCAG TERM 5656 5019448 - 5019422 - g 71 -7.2 -4.07568 | opp_overlap 5019422 CTTCCTTTTTGAAAA TCTTCCCCAGGC CAT GACTGAGGCAGA TTATAAAGCCTTGTT HRM2_44680 5017920 - 5019515 + | transposase HRM2_44690 5020113 - 5019541 - | hypothetical protein HRM2_44700 5020661 - 5020200 - | hypothetical protein HRM2_44710 5021135 - 5022655 + | hypothetical protein TERM 5657 5022637 - 5022655 + T 78 -2.4 -5.44119 | opp_overlap 5022653 TGAATTAGCAAAGAG TTATGATG AAA CAGCATGA TTTTTTTGCCATAAA HRM2_44720 5024872 - 5023022 - | hypothetical protein TERM 5658 5024582 - 5024568 - G 83 -2.9 -5.40474 | ATGTTCTCAAAAAAA TTTAG TTCCT CTAAA GTAAAATCATCCGGT HRM2_44730 5027104 - 5025119 - | hypothetical protein HRM2_44740 5029092 - 5027116 - | hypothetical protein TERM 5659 5028617 - 5028605 - G 76 -5.5 -4.78572 | opp_overlap 5028605, overlap 5028600 GTGTAACCAAGAAAA TCGGC ATC GCCAA CTTTCAGGTCATCTT HRM2_44750 5030312 - 5029524 - | putative restriction endonuclease HRM2_44760 5030710 - 5030360 - | hypothetical protein HRM2_44770 5031944 - 5031129 - | transposase family protein HRM2_44780 5032372 - 5031740 - | transposase family protein HRM2_44790 5032542 - 5032369 - | integrase family protein TERM 5660 5032523 - 5032566 + g 100 -18.4 -4.08394 | opp_overlap 5032525 5032538, overlap 5032515 5032538 AAATGGGTTGCGAAG CAGTGGCTTTGAAAATCCAA ACGT TTGGATTTTCTCAGCCACTG TTTTGCAAGCCATCT TERM 5661 5032564 - 5032525 - G 83 -15.2 -2.71011 | opp_overlap 5032523 5032538, overlap 5032538 ATGGGTTGCGAAGCA GTGGCTTTGAAAATCCAA ACGT TTGGATTTTCTCAGCCAC TGTTTTGCAAGCCAT HRM2_44800 5032547 - 5032714 + | integrase family protein HRM2_44810 5033866 - 5032979 - | hypothetical protein TERM 5662 5033262 - 5033277 + g 76 -5.4 -4.81249 | AGAATGCCCGCCCCA TTGGCC ACAT GGTCAA TTTTTCCCTTTACAA HRM2_44820 5034414 - 5033854 - | hypothetical protein HRM2_44830 5034669 - 5034451 - | hypothetical protein HRM2_44840 5035790 - 5034696 - | hypothetical protein TERM 5663 5034916 - 5034896 - G 76 -7.5 -4.41494 | CACCTGCAAGGAAAA GCTGACGTC CGG GACATCCGC CTGCAAGGGCAAAGG TERM 5664 5036852 - 5036840 - g 70 -9.1 -3.55071 | opp_overlap 5036848 5036849 GTACATTTTTCCAAA CGGCA TGC TGCCG TCCATGGCCCAGCTG TERM 5665 5036848 - 5036886 + G 87 -7.4 -4.91109 | opp_overlap 5036840 5036873, overlap 5036849 TTCCAAACGGCATGC TGCCGTCCATGGCC CAGCTGTCAAA GGCCATGGAAGGCC TTTTTGTCATGGAGG TERM 5666 5036849 - 5036885 + G 77 -10.9 -3.54183 | opp_overlap 5036840 5036873, overlap 5036848 TCCAAACGGCATGCT GCCGTCCATGGCC CAGCTGTCAAA GGCCATGGAAGGC CTTTTTGTCATGGAG HRM2_44850 5036010 - 5037128 + | Cyclopropane-fatty-acyl-phospholipid synthase TERM 5667 5037661 - 5037609 - g 91 -4.8 -5.58454 | gap 1, overlap 5037610 CCCAGATCAAAAAAA GGCCTGATCACAGCCGTTGAAGCCG AGTA CCGCTGCAACACCCGTGA-CAGACG ATGCCATATCTGGTT TERM 5668 5037660 - 5037610 - g 72 -8.3 -3.93988 | gap 1, overlap 5037609 CCAGATCAAAAAAAG GCCTGATCACAGCCGTTGAAGCCG AGTA CCGCTGCAACACCCGTGA-CAGAC GATGCCATATCTGGT HRM2_44860 5037138 - 5038076 + | putative dehydrogenase HRM2_44870 5038168 - 5038647 + | putative acetyltransferase HRM2_44880 5039473 - 5038634 - | Acetyltransferase HRM2_44890 5040258 - 5039473 - | probable 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 5669 5040325 - 5040337 + H 100 -6.2 -6.02546 | GTTTTACCTGCGATC CCGG CAAAT CCGG TTTTTTTTGATTTGG TERM 5670 5040692 - 5040671 - g 74 -8 -4.11216 | gap 1 CCCCTACCGGGAAAA GGGA-CGGC GCTCT GCCGATCCC GAACATAAACTGATC HRM2_44900 5040453 - 5041139 + | hypothetical protein HRM2_44910 5041637 - 5041155 - | Outer membrane protein TERM 5671 5041429 - 5041441 + g 76 -4.7 -4.91712 | ACAGCACCTGCAGCA CCGCC AAT GGGGG TTTTTGTGCCTTCGA TERM 5672 5042563 - 5042551 - gH 83 -9.1 -4.13282 | opp_overlap 5042551 ATGACATCGGCAAAA TCGGG GTT CCCGA TGTCATCCTCCTTAA HRM2_44920 5041914 - 5043008 + | Response regulator TERM 5673 5043532 - 5043513 - gT 80 -4.8 -5.07053 | overlap 5043514 AATCATGGGAAAAAA TGTCGCCC TCAT GGGCGGCC CCGGCGCAGGCCAGC TERM 5674 5043531 - 5043514 - gT 73 -8.3 -3.63148 | overlap 5043513 ATCATGGGAAAAAAT GTCGCCC TCAT GGGCGGC CCCGGCGCAGGCCAG ywkC 5042923 - 5043918 + | YwkC TERM 5675 5043903 - 5043930 + T 73 -9.9 -3.05769 | opp_overlap 5043903 5043905 5043909, overlap 5043897 5043905 CAAGGTGTTTGAACA GATGAACGCCC TGTAAC GGACGTTCATC TCTGTCATTTCCCGG TERM 5676 5043930 - 5043903 - T 86 -12.1 -3.02461 | opp_overlap 5043903 5043897 5043905, overlap 5043905 5043909 CAAGGTGTTTGAACA GATGAACGCCC TGTAAC GGACGTTCATC TCTGTCATTTCCCGG HRM2_44940 5045600 - 5044098 - | Na+-dependent transporter TERM 5677 5044792 - 5044781 - G 78 -3.6 -5.2166 | CAAGAACCGAAAAAA CCAG GATC CCGG AAATAATACTGAACC TERM 5678 5045669 - 5045629 - H 89 -11.8 -3.30124 | opp_overlap 5045628, overlap 5045630 TGCTATTTTGTATAA CCGTCATGGACTGGGCAG GGTCT CTGCCCTGGCCACAACGA AATTTGAAATACCCC TERM 5679 5045668 - 5045630 - H 91 -13.1 -2.57931 | opp_overlap 5045628, overlap 5045629 GCTATTTTGTATAAC CGTCATGGACTGGGCAG GGTCT CTGCCCTGGCCACAACG AAATTTGAAATACCC TERM 5680 5047122 - 5047105 - g 79 -7.7 -4.45151 | AACAGGGAACCAAAA CCATGGC CCGG ACCATGG CGGCGAAGATTCACC TERM 5681 5047591 - 5047563 - g 83 -8.8 -4.32402 | gap 1, opp_overlap 5047567, overlap 5047536 5047560 5047567 CCTGAAGGAAAACAA GCCACCTCCGGCC ACAC GGCCAGCG-TGGC AGGCGATTACATGGT HRM2_44950 5045877 - 5048279 + | putative Acetyl-CoA synthetase TERM 5682 5050135 - 5050151 + G 100 -4.4 -5.81412 | overlap 5050137 GAAACCATTGATGCC TTTGCC CGGGA GGCAGA TTTTTTTTCCATCGG pdp 5048269 - 5050542 + | Pdp TERM 5683 5050565 - 5050576 + T 73 -7.2 -4.23781 | TGTGGTGCCGCACAG GGGC CATG GCCC TTTAATTTTAATCGG HRM2_44970 5051263 - 5050613 - | putative zinc-finger protein TERM 5684 5051230 - 5051240 + g 100 -3.2 -6.09196 | GCACTGCATCTATGA TCTC TTT GAGG TTTTTTTGTTTTACC tmcA2 5051695 - 5051291 - | TmcA2 TERM 5685 5051576 - 5051561 - G 71 -5.4 -4.58395 | gap 1, overlap 5051563 GCCATGGGGGAAAAA CACAGCG GAA CGCTG-G CGGGTCTCGGGCATT TERM 5686 5051575 - 5051563 - G 75 -9.1 -3.90762 | overlap 5051561 CATGGGGGAAAAACA CAGCG GAA CGCTG GCGGGTCTCGGGCAT tmcB2 5052093 - 5051692 - | TmcB2 tmcC2 5052798 - 5052115 - | TmcC2 TERM 5687 5052409 - 5052385 - G 76 -4.2 -5.00616 | GGCCGGGGCAAAAAA CCGCCTGATC AGGAA AAACAGGCAG CAGACAATGACAACC HRM2_45010 5053110 - 5053385 + | hypothetical protein HRM2_45020 5054503 - 5053502 - | hypothetical protein TERM 5688 5053548 - 5053567 + g 86 -2.9 -5.54079 | CGGACACTGCCATCT TCATTCA ATGCAA TGGATGA TTTTTTAATTTTTGC TERM 5689 5053956 - 5053932 - G 76 -4.2 -4.99134 | AGGTCAAAGGAAAAA CCAACCCC GGAAAATTG GGGGGTGG TGACCCCGGCATTGA TERM 5690 5054747 - 5054780 + r 80 -4.6 -5.08824 | opp_overlap 5054747 AGGATAAATTAAAAA TACCGAGAAAAGAG ATCTCC CCTTTTTCCCGGTA TTTTTTGCCTGGCAC TERM 5691 5054780 - 5054747 - R 100 -8.3 -5.05505 | gap 1, opp_overlap 5054747 AGGATAAATTAAAAA TACCGAGAAA-AGAGA TCT CCCCTTTTTCCCGGTA TTTTTTGCCTGGCAC HRM2_45030 5056147 - 5055074 - | hypothetical protein HRM2_45040 5057199 - 5056147 - | Phosphatidylserine decarboxylase HRM2_45050 5059615 - 5057216 - | hypothetical protein TERM 5692 5057489 - 5057500 + g 80 -2.2 -5.4505 | CAGCCCATTGATATA GTAG TGTT CTGC TTTTTTATTGAAAAC TERM 5693 5057525 - 5057539 + g 95 -5.6 -5.66338 | overlap 5057520 GAAAACCTCGCCCCT GAACCC CAT GGGATC TTTTTTCTTGTCTTT TERM 5694 5057662 - 5057699 + g 90 -8.5 -4.9218 | gap 1 AAAAATTATCCATCA GGCCCT-GTGCATCTGTT TTT AACAGTTGAATGAGGGCC TTTTTATAATCAATC TERM 5695 5058915 - 5058962 + g 95 -12 -4.15044 | gap 1, opp_overlap 5058915 TGGGTAAACAGAAAA CGGATCAGGGTCTCTTTGGCCAT TTT ACGGCCAATG-GACGCTGAACCG TTTGTTCGGACAGGG TERM 5696 5058962 - 5058915 - G 100 -14.2 -4.78848 | gap 1, opp_overlap 5058915 TGGGTAAACAGAAAA CGGATCAGGGTCTCTTTGGCCAT TTT ACGGCCAATG-GACGCTGAACCG TTTGTTCGGACAGGG TERM 5697 5059284 - 5059296 + g 79 -7.7 -4.54821 | overlap 5059254 5059295 ACCCAGCTGTTTTCC CAGAC ATC GTCTG TTTTCTGATTCAGAT TERM 5698 5060300 - 5060312 + r 82 -10.5 -3.58869 | overlap 5060264 AGCCGATACTTCGCT CCGGC CGT GCCGG TTATATGAATTTATG HRM2_45060 5061153 - 5060323 - | hypothetical protein HRM2_45070 5061367 - 5061729 + | hypothetical protein TERM 5699 5061761 - 5061749 - g 72 -4.1 -4.81249 | overlap 5061741 5061750 TTGGAAATGGAAAAA CCCAT GGA ATGGA CAGAACAAGCTGAAG TERM 5700 5061872 - 5061859 - g 86 -8.1 -4.6526 | overlap 5061849 ACAAACCGGGAAAAA CCAGG TAAC CCTGG GGGAGGTCAAAGCCA HRM2_45080 5061740 - 5062543 + | putative dissimilatory sulfite reductase HRM2_45090 5062641 - 5063138 + | hypothetical protein HRM2_45100 5064429 - 5063206 - | putative signal transduction protein TERM 5701 5063911 - 5063933 + g 76 -4.9 -5.00616 | overlap 5063913 CAGGTCCAGGGCCTT TTGAAACTC TTCAT GGGTTTCGA TTTTTTCAGCCAGGA TERM 5702 5064243 - 5064265 + g 73 -12 -2.53876 | opp_overlap 5064241 5064245 GGAAATTGATGAATG CAGGCTTTCC CAT GGAAAGCCAG TCGATTCCCATGGAG TERM 5703 5064263 - 5064245 - G 78 -13.2 -2.57988 | opp_overlap 5064243, overlap 5064241 AAATTGATGAATGCA GGCTTTCC CAT GGAAAGCC AGTCGATTCCCATGG TERM 5704 5064670 - 5064659 - g 91 -4.4 -5.59502 | CAAAAAAGTAAAAAA GGAT ACCT ATCC CCGATCAAGGGAATC HRM2_45110 5064635 - 5064970 + | hypothetical protein HRM2_45120 5065109 - 5066236 + | iron-sulfur cluster binding protein TERM 5705 5067105 - 5067086 - g 73 -5 -4.65895 | gap 1, overlap 5067087 5067088 CTTTCCAGGGAAAAA CTTGCCGAC CTT GTCAGC-AG CGGCATTCTTGAGCT HRM2_45130 5066330 - 5067241 + | hypothetical protein TERM 5706 5068031 - 5068045 + G 72 -10 -3.39668 | CCATGATGATACTGG CCCTGT TTG ACAGGG TTGTCCCCTTTAAGA TERM 5707 5068097 - 5068085 - g 100 -5.5 -5.83226 | AACTCAAGAAAAAAA TCGGA AAC CCCGA AACCATCTATCTCCT HRM2_45140 5067241 - 5068215 + | hypothetical protein HRM2_45150 5070268 - 5068223 - | putative outer membrane receptor HRM2_45160 5070530 - 5070309 - | hypothetical protein HRM2_45170 5072526 - 5070532 - | putative puter membrane receptor TERM 5708 5070732 - 5070761 + g 71 -11.5 -2.78384 | opp_overlap 5070740, overlap 5070740 AGGTGTTGCTTGGCC CGGATAGACTGGA AGCG TCCAGTTGATCCG TGTAATGGCCCCAAA TERM 5709 5072059 - 5072046 - G 72 -9.5 -3.40299 | opp_overlap 5072046 TGATGATATTGATAA CGCCG TTGA CGGCG TTGGCTCCCCAGAGG HRM2_45180 5073065 - 5072523 - | hypothetical protein HRM2_45190 5075073 - 5073067 - | putative TonB dependent receptor (outer membrane receptor family protein) TERM 5710 5073797 - 5073811 + g 73 -5.6 -4.6971 | opp_overlap 5073796 GCCCTTGCAATGGAT GCCCAG AGA CTGTGC TTTTCTTGCGGTTTC barA 5077901 - 5075076 - | BarA TERM 5711 5076850 - 5076893 + g 70 -8.3 -3.68024 | gap 1, overlap 5076839 ATTTCTTCAATCAGG GCCGGCAGGTT-GAAGTTGA TGGTT TCAATTTCCAGCTTTCCGGC TTCTATCTTGGAAAA HRM2_45210 5078485 - 5077898 - | hypothetical protein TERM 5712 5078438 - 5078428 - G 74 -4 -4.98857 | ATGTAATTATAAAAA GAAA CCT TTTC ATCTGACAAATTTTT TERM 5713 5078631 - 5078662 + r 71 -9.4 -2.95918 | opp_overlap 5078636, overlap 5078630 AGATTCATCCCATGG CAAGAGGGTTGCAA ATGT TTGCAGCCCTCCAG GTTATTTACCGATTA HRM2_45220 5079853 - 5078675 - | putative arsenical-resistance protein TERM 5714 5079064 - 5079075 + g 78 -5.8 -4.75174 | CGCCTAAAAATTTTT CCTG GAAC CAGG TTTTTCCCTTGGCTG TERM 5715 5079183 - 5079164 - G 74 -10 -3.50332 | opp_overlap 5079164 5079167, overlap 5079145 CACCGACAGAACCAA TGCCTGCC AGGG GACAGGCA GTTTTCCAACACCCA TERM 5716 5079839 - 5079852 + g 73 -3.1 -4.93296 | TTTACGTTCATTACC TGGGT AAAC ACTCA TTTTTCTGCTCCTAG HRM2_45230 5080329 - 5079850 - | Putative protein-tyrosine-phosphatase HRM2_45240 5080727 - 5080347 - | Bacterial regulatory protein, ArsR family TERM 5717 5081615 - 5081603 - g 73 -9.1 -3.737 | CAATGTCTCAGGAAA GGCCA TTA TGGCC GCCTGCTACAGTGTT HRM2_45250 5080959 - 5082305 + | putative response regulator CheY-family fabG9 5083161 - 5082394 - | FabG9 acd14 5084309 - 5083164 - | Acd14 TERM 5718 5084223 - 5084239 + g 76 -2.9 -5.20328 | GGTTTTTTCAAGCTC TTCCGCC TGG GGTGCAA TTTCTTTTTTTGCAA HRM2_45280 5084781 - 5084371 - | hypothetical protein atoB5 5085962 - 5084781 - | AtoB5 TERM 5719 5084997 - 5085007 + g 76 -8.2 -4.13748 | opp_overlap 5084985 AATGGGAATTTTACC CCCG ATC CGGG TTTCCTCTTTTTCCC TERM 5720 5085594 - 5085621 + g 74 -7.6 -4.27316 | GGCAAAGGTCCGGGT GGCAAGGGCCGT TCCC ATGGCCGTGGCC TTTTCCGTTCCACCC alkK1 5086984 - 5086001 - | AlkK1 alkK2 5087688 - 5086939 - | AlkK2 HRM2_45320 5090272 - 5088140 - | Transcriptional regulator (PAS/PAC domain protein) TERM 5721 5089430 - 5089441 + g 90 -5.8 -5.28176 | ACTCTGGTTGGCCAT GGTG ATAA CACC TTTTTTATCAATGAC TERM 5722 5089727 - 5089711 - G 80 -2.2 -5.40072 | GCCCTTTTAAAAAAA GGGAGA CCGGT TTTCCC CAGGCCTGGAATGTT TERM 5723 5090023 - 5090035 + g 74 -3.5 -5.00884 | GGGTTACAACATTTT TTTTA ATA TAAAA TTTTTTCACCGGACT TERM 5724 5090042 - 5090058 + g 73 -12.3 -2.57344 | overlap 5090041 5090044 AATATAAAATTTTTT CACCGGA CTA TCCGGTG CTTCTCCGGCAGCTA HRM2_45330 5091321 - 5090443 - | Dienelactone hydrolase TERM 5725 5091255 - 5091245 - G 70 -2.4 -5.00616 | GCTCTGGTGAAAAAA GCCC GCC GGGT CATCTGAGTGTGACA TERM 5726 5091386 - 5091368 - H 70 -3.8 -4.77079 | overlap 5091370 TAGATATGAACAAAA TCGACAGA ACA TCAGTCAA AAAAAATTCGTTTTT TERM 5727 5092442 - 5092426 - g 80 -2.2 -5.41143 | overlap 5092427 GATCTTTTAAAAAAA CTGGTG GACTA CACCAT CAAAACCGATTTTCC TERM 5728 5092847 - 5092859 + G 71 -7.7 -4.07568 | opp_overlap 5092847 5092846, overlap 5092840 TGATGGCCCTCAAAC TGGGT CTT ACCCA TTTTAAACCGGAAAC HRM2_45340 5091733 - 5093337 + | hypothetical protein TERM 5729 5094063 - 5094073 + G 74 -2.4 -5.06414 | overlap 5094054 TGGCAAGGGTGGTTA CTGC CAC GCTG TTTTTCTTGCAACAA HRM2_45350 5093416 - 5094102 + | hypothetical protein HRM2_45360 5095663 - 5094170 - | Signal transduction histidine kinase HRM2_45370 5096605 - 5095862 - | response regulator, CheY-like receiver domain protein TERM 5730 5096252 - 5096218 - G 82 -12.2 -3.64703 | gap 1, overlap 5096200 TCCTGTCCATCGAAA GGCGATGCCTTCGGG TGACGG CCCGAAGGCGT-GCC AGGAGCTCCCGGGAG HRM2_45380 5096780 - 5099527 + | hypothetical protein TERM 5731 5099552 - 5099537 - f 95 -7.6 -5.16572 | ATGTAATTCAAAAAA CAGATC CGTT GATCTG ACCTTTCGCTAATTT TERM 5732 5100410 - 5100389 - g 74 -3.9 -5.00339 | gap 1, overlap 5100379 ACCAACAATTAAAAA CTGTATTATT TCC AATAAT-CAG ACCCTTAAAGCTGGT TERM 5733 5100504 - 5100494 - g 70 -3.2 -4.77036 | TTGTACCATTAAAAA CAAC TAT GCTG AATCAAGAGGCGGAG HRM2_45390 5099721 - 5102273 + | hypothetical protein TERM 5734 5102294 - 5102335 + T 76 -10.4 -2.96189 | gap 2, opp_overlap 5102300, overlap 5102300 ATCAAATTTCGTATG TTAGAA-GGCCCTC-GGAAA ATTA TTACCTGAGGGCCTTTCTAA ATTTCATCTTACATT TERM 5735 5102328 - 5102300 - T 74 -9.6 -3.32844 | gap 1, opp_overlap 5102294 5102300 TTTCGTATGTTAGAA GGCCCTC-GGAAA ATTA TTACCTGAGGGCC TTTCTAAATTTCATC TERM 5736 5102300 - 5102328 + T 83 -9.6 -4.03204 | gap 1, opp_overlap 5102300, overlap 5102294 TTTCGTATGTTAGAA GGCCCTC-GGAAA ATTA TTACCTGAGGGCC TTTCTAAATTTCATC HRM2_45400 5105270 - 5102604 - | Helicase, Snf2 family TERM 5737 5103836 - 5103820 - G 76 -2.9 -5.093 | opp_overlap 5103835, overlap 5103821 5103834 5103835 TTCAAAAGAAGAAAA TGGTCTG CCG CAAACCG CCACAGGGGTGTTAA TERM 5738 5103956 - 5103967 + g 74 -7.2 -4.25283 | GGGGAATCCGTTTTA CGGC ATCA GCCG TTTTGGTGGAAAAAT TERM 5739 5105280 - 5105302 + r 73 -7.2 -4.10925 | GGCCATGATTTATCC TATATTCATT TGT AATGAGTATA TTTTCAAACGTATAT HRM2_45410 5106644 - 5105361 - | Putative phosphatidylserine synthase TERM 5740 5105768 - 5105750 - G 70 -2.3 -4.91109 | overlap 5105766 CCCCGAGGATAAAAA GCACTGC GATAA GCCATGC GGCTGAACCGCCCTT TERM 5741 5106614 - 5106598 - G 82 -3.5 -5.2422 | AACCACAGGAAAAAA GCTGTCC CAA GGGCCGC AGAAAATGCAATCAC potC1 5107812 - 5106958 - | PotC1 potB1 5108666 - 5107809 - | PotB1 potA1 5109763 - 5108663 - | PotA1 TERM 5742 5109219 - 5109199 - G 74 -9.7 -3.6502 | overlap 5109203 CATGGGTGATGTAAA CAAAGGTGG TTC CCACCTTGG CCTGAAGTTTTTTCA TERM 5743 5109215 - 5109203 - G 86 -9.1 -4.46112 | overlap 5109199 GGTGATGTAAACAAA GGTGG TTC CCACC TTGGCCTGAAGTTTT TERM 5744 5109570 - 5109597 + g 84 -14.8 -2.71416 | overlap 5109570 CCCTGCATGTCTTTT CCCCGGATGGCG ATCA CGCCGTCCGTGG GTTCTGTAAATCCTG TERM 5745 5109570 - 5109598 + g 89 -14.6 -3.52896 | gap 1, overlap 5109570 CCCTGCATGTCTTTT CCC-CGGATGGCG ATCA CGCCGTCCGTGGG TTCTGTAAATCCTGC potD 5110941 - 5109874 - | PotD TERM 5746 5110915 - 5110903 - G 70 -2.7 -4.8622 | CCCTGCAATCAAAAA CATGA AAA TCATA AAACCCGCAAAAATA TERM 5747 5111305 - 5111291 - g 79 -7.1 -4.64598 | opp_overlap 5111290 GAACTATCTTAAAAA CCGCA TTGAT TGCGG CCTTGTTCAGCATGG dppA3 5111266 - 5112867 + | DppA3 TERM 5748 5112892 - 5112920 + F 80 -11.6 -2.58544 | opp_overlap 5112893, overlap 5112891 TTATTTGATCAATCC AGGCGGTGCGGG CAGCA CCCGTGCCGCCG CTTCTAAAGGTGAGA TERM 5749 5112919 - 5112893 - f 80 -11.4 -2.56914 | opp_overlap 5112892 5112891 TATTTGATCAATCCA GGCGGTGCGGGC AGC ACCCGTGCCGCC GCTTCTAAAGGTGAG TERM 5750 5113357 - 5113319 - g 90 -9.5 -4.56597 | gap 1, opp_overlap 5113325 5113338, overlap 5113340 TTGCCGGGGTAAAAA GGGGTTCCCCCATTGACC ACAC GGTCA-TGGGGGTTTCCC TGACCGGCTATTCCA TERM 5751 5113325 - 5113351 + G 83 -13.1 -3.64822 | gap 1, opp_overlap 5113319 5113340, overlap 5113338 GGGTAAAAAGGGGTT CCCCCATTGACC ACAC GGTCA-TGGGGG TTTCCCTGACCGGCT TERM 5752 5113669 - 5113659 - g 72 -8.2 -3.95022 | TGTACGAACAGCAAA GGCC AAA GGCC TATCACCGTTCCGGG dppB2 5112946 - 5113956 + | DppB2 TERM 5753 5114588 - 5114564 - g 83 -2.7 -5.41143 | CATGTCGGAAAAAAA CCTTGATTACG TCA CGGCCTCAAGG ATCTGCGGGGCCAGT dppC2 5114001 - 5114900 + | DppC2 dppD3 5114923 - 5115897 + | DppD3 dppF2 5115887 - 5116864 + | DppF2 HRM2_45510 5117486 - 5117124 - | hypothetical protein HRM2_45520 5117988 - 5118794 + | hypothetical protein HRM2_45530 5121436 - 5118818 - | putative protease TERM 5754 5122002 - 5122012 + G 70 -2.4 -5.00616 | opp_overlap 5122009 CCCCTCTGACTATGT GGAC ACA GGCC TTTTTTCAGACCACA HRM2_45540 5121595 - 5122560 + | putative SAM-dependent methyltransferase family protein HRM2_45550 5122665 - 5123345 + | hypothetical protein hisD2 5123372 - 5124670 + | HisD2 TERM 5755 5124732 - 5124675 - T 100 -11.4 -5.86976 | opp_overlap 5124687, overlap 5124687 GGACAAAATAAAAAA CCCCGTTAAAAAGCCGCCAATCCCAA GAATAT TTGGAACTGGCGGCTTTTAAATTGCG GTTCCGGCGATTCCT TERM 5756 5124687 - 5124720 + T 100 -11.7 -4.28432 | opp_overlap 5124687 5124675 AAACCCCGTTAAAAA GCCGCCAATCCCAAG AATA TTTGGAACTGGCGGC TTTTAAATTGCGGTT TERM 5757 5124720 - 5124687 - T 100 -15.4 -4.58685 | opp_overlap 5124687, overlap 5124675 AAACCCCGTTAAAAA GCCGCCAATCCCAA GAATAT TTGGAACTGGCGGC TTTTAAATTGCGGTT HRM2_45570 5125843 - 5124983 - | ABC-type zinc transport system, periplasmic binding protein TERM 5758 5125622 - 5125606 - G 80 -2.1 -5.43866 | CAATGGTGAAAAAAA GCCCGGC CTC GGCAAGC TTTGCCATCTGGGAG TERM 5759 5125907 - 5125944 + r 86 -9.7 -4.04206 | AGGCGTTTCAAAATT CGTTGAGGCCGGAGCCA TAAC TCGCTCCGGCCGTGCCG TTTATATAAAACTCG TERM 5760 5125983 - 5125956 - R 74 -6.2 -4.52589 | opp_overlap 5125956 5125975 5125981, overlap 5125958 5125980 5125981 GCCGTTTATATAAAA CTCGTTTCAACC GGCA GGCGGAAACGGG TGTTACCCTTCTCTC dctM10 5127440 - 5126148 - | DctM10 dctQ10 5127913 - 5127440 - | DctQ10 dctP10 5129016 - 5127946 - | DctP10 TERM 5761 5128481 - 5128470 - G 86 -5.8 -5.06816 | AGGTGTCAATAAAAA TGGG ACTT CCCA CCACCCGGAGTCTCA TERM 5762 5128951 - 5128930 - G 74 -10.1 -3.53563 | ATACTCTCGCTTAAA CGTTCCGGC ACTT GCCGGAAAG GCAACCATTATTGCA TERM 5763 5128984 - 5128995 + g 81 -5.8 -5.00884 | opp_overlap 5128984 5128983 CCATGTTGACACAAC GGCA ATGG TGCC TTTTTTCAGCCACAT TERM 5764 5129285 - 5129323 + r 70 -7.3 -3.79747 | opp_overlap 5129290, overlap 5129287 5129289 5129290 GGTTTTTTAGACACA GAAAATCAGCAGGGGGC AAAAA GCCCCCTGCCGAATCTA TTTAATGATGCCTGG TERM 5765 5129287 - 5129321 + r 78 -9.9 -3.48292 | opp_overlap 5129290, overlap 5129285 5129289 5129290 TTTTTTAGACACAGA AAATCAGCAGGGGGC AAAAA GCCCCCTGCCGAATC TATTTAATGATGCCT TERM 5766 5129289 - 5129319 + r 95 -12.5 -3.31162 | opp_overlap 5129290, overlap 5129287 5129285 5129290 TTTTAGACACAGAAA ATCAGCAGGGGGC AAAAA GCCCCCTGCCGAA TCTATTTAATGATGC TERM 5767 5129290 - 5129318 + r 100 -16 -2.58215 | opp_overlap 5129290, overlap 5129289 5129287 5129285 TTTAGACACAGAAAA TCAGCAGGGGGC AAAAA GCCCCCTGCCGA ATCTATTTAATGATG TERM 5768 5129318 - 5129290 - R 100 -18.2 -4.64844 | opp_overlap 5129289 5129287 5129285 5129290 TTTAGACACAGAAAA TCAGCAGGGGGC AAAAA GCCCCCTGCCGA ATCTATTTAATGATG TERM 5769 5129346 - 5129332 - R 72 -10 -2.76189 | overlap 5129329 GAATCTATTTAATGA TGCCTG GAT CAGGCA GTAAAATCAGGGTAG amt 5130653 - 5129340 - | Amt glnB4 5131059 - 5130721 - | GlnB4 TERM 5770 5130831 - 5130845 + g 79 -11.4 -3.54543 | opp_overlap 5130831 CAGCCGACTTGATAA TGGCCG CAA CGGCCA TTTCCACCAATGCGT TERM 5771 5130845 - 5130831 - G 76 -11.4 -3.33162 | opp_overlap 5130831 CAGCCGACTTGATAA TGGCCG CAA CGGCCA TTTCCACCAATGCGT TERM 5772 5131270 - 5131248 - R 100 -8.6 -4.98531 | opp_overlap 5131231, overlap 5131232 5131261 TTTTGAAATTAAAAA TTACAAAAAC TAC GTTTTTGCAA ACAGAGTCAAGACAA HRM2_45630 5132947 - 5131313 - | ABC-type transporter, ATP-binding protein TERM 5773 5131359 - 5131380 + g 71 -5.8 -4.30014 | overlap 5131362 GAAAGATAGTAGTCG TAACCGCC GCTATA GGCGGTCA TTTTCCCTTGGTCGA TERM 5774 5131452 - 5131431 - G 71 -5.1 -4.49939 | overlap 5131433 AGACAACGCAGAAAA TACCGGTCA TGAC TGACCAGAA TGAGGGTCCCGGTAA TERM 5775 5131777 - 5131760 - G 72 -9.9 -3.40775 | overlap 5131758 ATGCTGACTGAAATA GCCAATG TTGA CATTGGC TCCAACTCTTGCGCT TERM 5776 5131849 - 5131835 - G 70 -4.2 -4.60889 | opp_overlap 5131825, overlap 5131825 5131837 AAGGACCTTTAAAAA GGTGGA TTT TCCAGC ACCGTTGACCCCAAC TERM 5777 5131933 - 5131947 + g 86 -7.1 -5.00884 | TCTGAGGCTCAGTAT CCTGG CCGTT CCAGG TTTTTTCCAGGGACT HRM2_45640 5133768 - 5132956 - | hypothetical protein TERM 5778 5133735 - 5133750 + g 100 -3.9 -5.86332 | opp_overlap 5133724 ATGAGGTGGTGCCCA GCCTG AACAAC CGGGC TTTTTTTTCGATTGA cbiB 5134736 - 5133783 - | CbiB TERM 5779 5134019 - 5134030 + g 71 -7.2 -4.07568 | overlap 5134007 TGTGGCACTGCCCCT CGGC AAGG GCCG TTTTAAAAGCCCGCC TERM 5780 5134473 - 5134460 - G 100 -3.8 -5.90231 | AGAAACAGAAAAAAA GCAG TACCGT CTGC ACCACATCTCCCAGA HRM2_45660 5135853 - 5134738 - | putative histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase TERM 5781 5135376 - 5135386 + g 70 -8.2 -3.68222 | opp_overlap 5135376 5135373 GTTTTTCAACAAGCA CCCC GGT GGGG TTGTTGGGGTTGCAG TERM 5782 5135892 - 5135875 - R 74 -7 -4.386 | TAATCCTTCATAAAA TTGCGG TCCCTG CCGCAA GAAATAAAACGGCTT cobS 5136628 - 5135867 - | CobS TERM 5783 5136186 - 5136163 - G 73 -11 -2.88959 | overlap 5136160 5136158 GGATACCAAACAGCA TGCCTCCCCT TGAA AGGGCAGGCA CCATGAACAGGATCA HRM2_45680 5138156 - 5136615 - | hypothetical protein TERM 5784 5137441 - 5137474 + g 70 -9.1 -3.53855 | gap 1, overlap 5137439 CGATAATCAAGCTCA GTTTTGATC-AGGGCT AAA AGCCTTGGATTAAAAC TCTCTTTTTCAGAAA TERM 5785 5138036 - 5138025 - G 74 -2.2 -5.06414 | GTTGGGGAAGAAAAA GTAG GTCT CCAC ATCATAGACCTTTGC TERM 5786 5138079 - 5138096 + g 82 -4.1 -5.31877 | opp_overlap 5138070 5138081, overlap 5138070 GGTAAACGGGTAACC CAGCTTG ATTT CAAACTG TTTTTTATCGTGGAT HRM2_45690 5139140 - 5138190 - | putative Fe-S oxidoreductase TERM 5787 5138649 - 5138624 - G 74 -2.5 -5.18726 | opp_overlap 5138625, overlap 5138625 5138626 CGGGCAGAATAAAAA TTTCCAGGGCA AACC TGCCGTGAAAT TCTGCCCTGAAGGCG HRM2_45700 5140212 - 5139280 - | putative chemotaxis protein TERM 5788 5139749 - 5139767 + g 77 -10.2 -3.55203 | opp_overlap 5139741 5139744 5139743, overlap 5139766 ACAAAATCAGTGTTA CCGGGTAG TTC CTCCCCGG TTTCAAACAAATTTT TERM 5789 5140078 - 5140089 + g 70 -4.4 -4.59773 | overlap 5140071 5140070 ATTGTCACGCTTCAG GAGA AGCA TCTC TTTTTCCACATCCGG HRM2_45710 5140828 - 5140259 - | hypothetical protein TERM 5790 5140692 - 5140709 + g 81 -6.3 -5.00616 | gap 1, opp_overlap 5140689, overlap 5140701 GAATTTAATGCACCA TCCACCAG TGG CTGG-GGA TTTTTTCCACCCCCA TERM 5791 5140913 - 5140892 - R 74 -8.1 -3.92746 | gap 1 CCCACTTGAAAAAGA GCAC-CAAGT CAA ACTTGAGTGC AAACAAACAAATAGA HRM2_45720 5142027 - 5140975 - | putative outer membrane protein TERM 5792 5141372 - 5141397 + g 72 -8.3 -3.89346 | gap 1, overlap 5141374 TGGTTCTCAAGCCCG GC-CTGGATGAG GCT CTCCTCCAGTGC TTTCTCAACTCCAGA TERM 5793 5141849 - 5141838 - G 70 -3 -4.80453 | overlap 5141834 GGATGATAAAACAAA TCAA CGTT TTGA GCAGAGTAACCTTTC TERM 5794 5142112 - 5142094 - R 82 -3 -5.5454 | GGAAAGAAATAAAAA CCTTCGCC CGG AACGATGG GGGGGTTAACCTACA TERM 5795 5142148 - 5142176 + r 78 -10.4 -3.36341 | overlap 5142151 GATTGGCACCAAGGT CAATCCCTGG GAATACCCA CCAGGGATTG TATTTGACACCTGTT HRM2_45730 5142538 - 5142317 - | hypothetical protein TERM 5796 5142628 - 5142611 - R 78 -9.1 -3.76586 | overlap 5142609 CTTTAAACAGAAACA GACCGGG CATA CCCGATC ACTACAGGGGTCTTT TERM 5797 5142736 - 5142701 - R 100 -9.1 -5.46276 | gap 1, overlap 5142704 AACATACATAAAAAA GAAGAGGGCCATGG CGTTTCATC CCATGGCCCTCC-C TGTACAACAATTTTT TERM 5798 5142734 - 5142704 - R 100 -14.1 -4.78477 | overlap 5142701 ATACATAAAAAAGAA GAGGGCCATGG CGTTTCATC CCATGGCCCTC CCTGTACAACAATTT TERM 5799 5142812 - 5142824 + r 77 -10.5 -3.2218 | opp_overlap 5142810 AGCAGACATCATACG CCGGC CGT GCCGG TTAATAAATATTCAG glnA2 5144153 - 5142825 - | GlnA2 TERM 5800 5143478 - 5143490 + g 71 -5.5 -4.44046 | TTGGCATAAAGGTGG CGTGG AGC CCATG TTTCTTTGCAATGGA TERM 5801 5143782 - 5143758 - G 74 -6.5 -4.33928 | gap 1, opp_overlap 5143761 5143761 CAGTTTAAAGAGAAA GAAC-TCGGC CTCTGT GCCGACGTTC ATGGTAAATCCCATC HRM2_45750 5144529 - 5145014 + | hypothetical protein mip2 5145715 - 5145017 - | Mip2 HRM2_45770 5146676 - 5145879 - | putative peptidase TERM 5802 5146729 - 5146711 - H 93 -12.4 -3.19629 | overlap 5146709 TGAACAGAATAGATA CAGCCGCG AAT CACGGCTG GGAGTACAAACAACC HRM2_45780 5146745 - 5147371 + | hypothetical protein TERM 5803 5147675 - 5147661 - g 91 -4.2 -5.626 | overlap 5147670 GATCTCAGAAAAAAA GGCC ATGAATG GGCC GTGGTCCAGTCGTTG cbiK3 5147451 - 5148218 + | CbiK3 HRM2_45800 5149671 - 5148307 - | Probable aspartokinase (Aspartate kinase) TERM 5804 5149773 - 5149730 - R 100 -16.8 -3.56273 | opp_overlap 5149729, overlap 5149731 GTTATCATGATATAA GGGTATGGCCAGAGCAAGGT ATCT ACCCTACCCTGGCCACACCA AATTTCAAACGCCTC TERM 5805 5149772 - 5149731 - R 100 -20.3 -2.73443 | opp_overlap 5149729, overlap 5149730 TTATCATGATATAAG GGTATGGCCAGAGCAAGGT ATCT ACCCTACCCTGGCCACACC AAATTTCAAACGCCT HRM2_45810 5151247 - 5149943 - | Proton/sodium-glutamate symport protein TERM 5806 5150521 - 5150507 - G 80 -4.9 -5.1361 | overlap 5150517 AGAAATCCCAAAAAA GGCGA GTAAT CCGCC ATAAACAAGGACGGC HRM2_45820 5152995 - 5151598 - | Response regulator TERM 5807 5152907 - 5152923 + g 91 -6.6 -5.14563 | opp_overlap 5152907 TTGGCATCATAAAAG GGGTAT ACCCG ATACCC TTTTTTAGTCAGACC HRM2_45830 5154730 - 5152988 - | Signal transduction histidine kinase TERM 5808 5153641 - 5153654 + g 72 -3.8 -4.82667 | overlap 5153623 5153622 GGGCCGTGGTTTTAA TCCC GGCCAG GGGA TTTTTGATCTCATGG HRM2_45840 5155637 - 5154738 - | putative ABC-type amino acid transport-system, periplasmatic component HRM2_45850 5156968 - 5155655 - | putative methylthioadenine synthetase HRM2_45860 5158062 - 5156965 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 5809 5157025 - 5157012 - GR 82 -5.9 -5.00616 | overlap 5157014 5157015 CGTCCCTGTAAAAAA CAGCC ACCT GGCCG GGTGTGACGGCCAGC TERM 5810 5157171 - 5157187 + gr 74 -7.9 -4.0162 | GTGTTATCCAGTTGA GGTCGCC AAC GGCCACC TTTATCGTGTAAAGC TERM 5811 5157809 - 5157821 + gr 72 -6.3 -4.3467 | opp_overlap 5157809 AATTCAGCACTTAAA TCCAT CTG ATGGA TTTTAATATCAAGCT HRM2_45870 5158415 - 5157984 - | putative ferredoxin TERM 5812 5158031 - 5158017 - G 77 -9.2 -4.08767 | GGTATCCTTGGAAAA CAGGCC CAT GGCCCG GGTGGGGCAGGTGAG TERM 5813 5159272 - 5159306 + G 76 -6.5 -4.57341 | gap 1, opp_overlap 5159269 5159266, overlap 5159267 CCCTTGAAACCATTC CTGGATTTGCAGGAAG GATC TTTCCGGCAGA-CCAG TTTTTCAAGGCCCTT HRM2_45880 5158659 - 5159549 + | hypothetical protein HRM2_45890 5159546 - 5161543 + | Membrane carboxypeptidase (penicillin-binding protein) TERM 5814 5161868 - 5161858 - g 76 -6.8 -4.46212 | opp_overlap 5161860, overlap 5161860 CCCTTCAGGACAAAA TGGG TCG CCCA TGGCCTCCTTGCCTC HRM2_45900 5161540 - 5162808 + | hypothetical protein HRM2_45910 5163539 - 5162823 - | hypothetical protein TERM 5815 5163179 - 5163191 + g 79 -9.1 -4.25104 | overlap 5163166 CGGTCTGATCCACGG CCGGA CTT TCCGG TTTTGCTGCCGGCAG TERM 5816 5163650 - 5163621 - R 100 -10.9 -4.35524 | TTGTCAAAGTGAAAA TTTCTATGGGATC GGAC GATGCCATAGAAA ATACAATTGAAATAT TERM 5817 5163922 - 5163910 - R 86 -10.5 -3.86346 | overlap 5163911 CGAGTTTCTTATAAA CCGGC ACG GCCGG AGCGAGGGATGGCTC TERM 5818 5163948 - 5163911 - R 73 -9.7 -2.91593 | overlap 5163910 GAGTTTCTTATAAAC CGGCACGGCCGGAGCGA GGGA TGGCTCCGGCCTCAACG AATAATGAAAATGGT TERM 5819 5163978 - 5164012 + r 70 -7.6 -3.6692 | opp_overlap 5163970, overlap 5163977 TATTATACCGCCCCG GCGGGCGATGGGACCG GCC CGGGACCGTCGGCGGC TCTTTTGCCCTGCCG HRM2_45920 5164993 - 5164256 - | hypothetical protein HRM2_45930 5165144 - 5165950 + | putative SAM-dependent methyltransferase TERM 5820 5166792 - 5166778 - gf 83 -11.4 -2.94354 | TCAGATATGTATACA CGGGCA ACG TGCCCG GCATTGAAGGTGAAA HRM2_45940 5165919 - 5166929 + | Pyruvate-formate lyase-activating enzyme TERM 5821 5167009 - 5167025 + G 82 -8.1 -4.57569 | opp_overlap 5167012 GATGAAGTCAGCATT TAAGGAT CAA ATCCTTA TTTTTGGACGAATGA ubiA 5166941 - 5167864 + | UbiA HRM2_45960 5167861 - 5168469 + | putative 3-polyprenyl-4-hydroxybenzoate decarboxylase HRM2_45970 5168469 - 5169776 + | tRNA nucleotidyltransferase/poly(A) polymerase TERM 5822 5169947 - 5169910 - T 100 -6.2 -5.77677 | opp_overlap 5169910 CAAAATAATAAAAAA GGGCGTGGTGTCGAAA CTATTT TTTCGGCCTCACACCC TTTTTAATTGTTAGA TERM 5823 5169910 - 5169947 + T 100 -8.4 -4.99435 | opp_overlap 5169910 CAAAATAATAAAAAA GGGCGTGGTGTCGAAA CTATTT TTTCGGCCTCACACCC TTTTTAATTGTTAGA opuD5 5171514 - 5169970 - | OpuD5 mttB711 5172956 - 5171535 - | MttB711 TERM 5824 5172376 - 5172401 + g 70 -2.5 -5.00616 | gap 1, overlap 5172378 TTCACAGATACAATG GAGACGGGG-TG TGC CAGTTCCGTCAC TTTTTTACCCCAGAC TERM 5825 5173219 - 5173200 - H 88 -6.6 -5.22039 | opp_overlap 5173200 5173199 GTCAAATTCAAAAAA GATAATTT AATA AAATTATC ATTCTTTTTTGAAAC TERM 5826 5174045 - 5174021 - g 82 -4.1 -5.22039 | overlap 5174024 TTGAAACCGAAAAAA TCACCAACCTG AGC CTGGCCGGGGA TACAGGGTTTGAACT TERM 5827 5175370 - 5175350 - g 100 -7.6 -6.0458 | ATAAAGCAAAAAAAA TCGCCTCA TCCAT TGAAGCGA TCCGGGCCGCTTCCG HRM2_46000 5173381 - 5175909 + | Signal transduction histidine kinase TERM 5828 5176929 - 5176911 - g 74 -2.4 -5.06414 | overlap 5176913 TCTCGGTAATAAAAA TCCAGG TACCCAC CCTGAA TCAGCGCCAGGAGGA ntrC3 5175986 - 5177386 + | NtrC3 TERM 5829 5177654 - 5177620 - f 100 -10.3 -4.32607 | gap 2 TGAAAATTGAACAAA GGTTT-CCTGCA-CAAA GCG TTTGCTGCAGGCAAACC TAAAGAAGGCCAAGA TERM 5830 5178462 - 5178447 - g 71 -6.8 -4.1899 | TGATCTGATGGAAAA CACCCC CTGG GAGGTG AACATGGGCTGGGTG TERM 5831 5178691 - 5178670 - g 100 -10.9 -5.15634 | gap 1, overlap 5178672 CATCGCATGAAAAAA TC-CCTGGCC CTG GGCCAGGTGA AACCCGAGCTCAAAG TERM 5832 5178688 - 5178672 - g 79 -13.7 -2.80472 | overlap 5178670 TCGCATGAAAAAATC CCTGGCC CTG GGCCAGG TGAAACCCGAGCTCA HRM2_46020 5177704 - 5178798 + | putative glycine cleavage system T protein (aminomethyltransferase) TERM 5833 5178827 - 5178862 + F 76 -6.9 -4.55093 | gap 1, opp_overlap 5178827 5178830, overlap 5178828 5178830 GCTTTCAATAGCCAA G-CATCAGACGACCCT TTATC AGGGCCGTCTGATATC TTTATTCTTGTATAC TERM 5834 5178861 - 5178827 - f 84 -11.5 -3.1855 | opp_overlap 5178827 5178828 5178830, overlap 5178830 GCTTTCAATAGCCAA GCATCAGACGACCCT TTATC AGGGCCGTCTGATAT CTTTATTCTTGTATA TERM 5835 5178828 - 5178860 + F 86 -10.6 -3.87147 | opp_overlap 5178827 5178830, overlap 5178827 5178830 CTTTCAATAGCCAAG CATCAGACGACCCT TTATC AGGGCCGTCTGATA TCTTTATTCTTGTAT TERM 5836 5178830 - 5178858 + F 100 -13.2 -3.49969 | opp_overlap 5178830 5178827, overlap 5178828 5178827 TTCAATAGCCAAGCA TCAGACGACCCT TTATC AGGGCCGTCTGA TATCTTTATTCTTGT TERM 5837 5178858 - 5178830 - f 100 -15.4 -2.7898 | opp_overlap 5178828 5178827 5178830, overlap 5178827 TTCAATAGCCAAGCA TCAGACGACCCT TTATC AGGGCCGTCTGA TATCTTTATTCTTGT HRM2_46030 5178895 - 5179527 + | Cobalamin-dependent methionine synthase, B12-binding:Coenzyme B12-binding metH4 5179720 - 5180349 + | MetH4 ppsA9 5182985 - 5180556 - | PpsA9 TERM 5838 5181746 - 5181779 + g 100 -8.8 -5.31275 | opp_overlap 5181748 AAAGAACCCTGGTAA GATCTACAGCCGGC ACAATC GCCGGATGAGGATC TTTTTTCTGGTGCAG HRM2_46060 5187550 - 5183630 - | hypothetical outer membrane protein TERM 5839 5185687 - 5185665 - G 74 -4.9 -4.82901 | CCGCCGGGAGAAAAA CTGGGAA TTGTTTTTG TTCCCAG AGATTGAAAGGGGGT TERM 5840 5187464 - 5187493 + g 78 -3.5 -5.20222 | overlap 5187466 GCTCTTTAATTGCAT TTCATCCAGACCT TTAA GGGTGCGGATGGA TTTTATTTCTTTAAT TERM 5841 5187853 - 5187841 - H 80 -10.5 -3.52079 | overlap 5187842 CAACATTTTATATAA CCGGC ACG GCCGG AGCGAGGTATGGCTC TERM 5842 5187879 - 5187842 - H 71 -9.7 -2.70766 | overlap 5187841 AACATTTTATATAAC CGGCACGGCCGGAGCGA GGTA TGGCTCCGGCCTCAACG AATTTTGAAACGCCG TERM 5843 5187942 - 5187930 - H 89 -10.5 -4.03413 | overlap 5187931 AGTGTTTCATATAAA CCGGC ATG GCCGG AGCATGATATCTGCT TERM 5844 5188200 - 5188186 - H 100 -8.6 -5.14563 | opp_overlap 5188185 5188186 5188188 CTTTTTATTAAAAAA TACCAC AAT GTGGTA GTTTGTCAATACATA HRM2_46070 5188358 - 5188606 + | ABC-type sugar transport-system, permease component HRM2_46080 5189641 - 5188592 - | hypothetical protein TERM 5845 5188766 - 5188746 - G 71 -6.1 -4.42788 | GTCAACGGCAGAAAA CTGGCCACA GTC TGTATCCAG TGGGGGGCACCCTCC ald2 5190756 - 5189644 - | Ald2 HRM2_46100 5191765 - 5191043 - | ABC-type transport system, ATPase component TERM 5846 5191440 - 5191460 + g 72 -3.9 -4.82901 | overlap 5191441 5191442 ATACACAGTCGTCTC ACCTCTTCC ATG GGAAGAGAA TTTTTATAAAACCGG HRM2_46110 5192688 - 5191765 - | putative metal-dependent phosphoesterase TERM 5847 5191879 - 5191893 + g 83 -2.8 -5.40474 | overlap 5191881 GTCAGACCCGCCCGT AACAAC CAG GTTGTA TTTTTTTGCCCAGGT TERM 5848 5192372 - 5192352 - G 76 -11.1 -3.28712 | opp_overlap 5192360, overlap 5192353 5192356 CCCGCTGGGCCACAA GCAACGGCC CCC GGCCGTTGG CAAGGGTGTCTGAAA TERM 5849 5192371 - 5192353 - G 81 -14.6 -2.57132 | opp_overlap 5192360, overlap 5192352 5192356 CCGCTGGGCCACAAG CAACGGCC CCC GGCCGTTG GCAAGGGTGTCTGAA TERM 5850 5192368 - 5192356 - G 75 -10.5 -3.44146 | opp_overlap 5192360, overlap 5192353 5192352 CTGGGCCACAAGCAA CGGCC CCC GGCCG TTGGCAAGGGTGTCT TERM 5851 5192881 - 5192866 - g 70 -4.6 -4.69664 | overlap 5192867 TACAGCACGGAAAAA GCCGCT CCAA AGCGGA GGATTCAAAACAGCG TERM 5852 5193143 - 5193159 + G 80 -12.3 -3.36648 | opp_overlap 5193122 GGTGGTCGGCCATCT GCCGTTC ATG GAACGGC TTGTGGGCTATCTTG sixA 5192835 - 5193299 + | SixA HRM2_46130 5193874 - 5193335 - | putative formylmethanofuran dehydrogenase, subunit E HRM2_46140 5195149 - 5193917 - | putative lipoprotein HRM2_46150 5195359 - 5195526 + | hypothetical protein TERM 5853 5196408 - 5196387 - g 100 -3.7 -6.20267 | gap 1, opp_overlap 5196390, overlap 5196403 GGAAAAAGAAAAAAA CACCGG-GAT AAC ATCACCCGTG GATTACCGCCGGATC TERM 5854 5196766 - 5196755 - g 70 -2.2 -5.03314 | TCGATCTGGAAAAAA CCCT GATC AAGG AGGCTTCAGAGGCGG HRM2_46160 5195695 - 5197869 + | putative acyl-CoA synthetase HRM2_46170 5198851 - 5198102 - | hypothetical protein TERM 5855 5198885 - 5198898 + r 76 -6.7 -4.56597 | AATTTAAAAACCCGA CAGTG CCAC CACTG TTTTTCCGACAAACG HRM2_46180 5199363 - 5199001 - | putative transcriptional regulator HRM2_46190 5199470 - 5199682 + | hypothetical protein TERM 5856 5199715 - 5199686 - T 100 -15 -5.45802 | TCTGGAAAATAAAAA TCCCCCCGGCCC TTTTAC AAGCCGGGGGGA TCACAGGTGCGACTA HRM2_46200 5200576 - 5199728 - | putative uridylate kinase HRM2_46210 5201210 - 5200713 - | hypothetical protein TERM 5857 5200912 - 5200922 + g 76 -3.2 -5.21709 | AGCTCCAGGTAATCC GAGG TGG TCTC TTTTTTAATCTCGAG TERM 5858 5201787 - 5201765 - R 100 -6.9 -5.65927 | overlap 5201767 GAGGCAAATAAAAAA CAGCCTGCC GGTCT GGCAGGCAA CCATATCTGGTGGGC TERM 5859 5201785 - 5201767 - R 100 -11.7 -4.45696 | overlap 5201765 GGCAAATAAAAAACA GCCTGCC GGTCT GGCAGGC AACCATATCTGGTGG HRM2_46220 5202455 - 5201817 - | Putative endonuclease III TERM 5860 5202497 - 5202486 - H 85 -2.2 -5.78622 | TCACTGTAAAAAAAA CCAC AATT GTGA TCGAAACCAGTTGGA HRM2_46230 5202621 - 5202806 + | hypothetical protein codA 5204487 - 5203216 - | CodA TERM 5861 5204037 - 5204025 - G 73 -9.1 -3.67597 | TTTTGGACCGAAGAA CCCCA TCC TGGGG AAAGGCAACCAGCTG HRM2_46250 5205431 - 5204490 - | ABC-type sugar transport-system, permease component TERM 5862 5204873 - 5204853 - G 73 -5.3 -4.72272 | opp_overlap 5204863, overlap 5204856 GGTCCGGAGCAAAAA GACGTCCAG ACC CTGGGCTTC AACGGCCAGGGGATT TERM 5863 5205245 - 5205230 - G 74 -6.8 -4.40561 | overlap 5205227 5205231 CTGCGGCAAAAACAA CCCCTC CCCA GAGGGA TCCCCCCTGGTAGAC HRM2_46260 5206486 - 5205437 - | ABC-type sugar transport-system, permease component TERM 5864 5206037 - 5206021 - G 73 -2.9 -4.99645 | AGTTTACAAACAAAA GCACAAC AAA ATTGAGC AAAAGGGTGGTGACC TERM 5865 5206120 - 5206105 - G 80 -3.2 -5.22006 | overlap 5206106 5206107 GCACCAGAAGAAAAA GCCC GCCGGCAA GGGC ACCGGCCGTAAAGAG TERM 5866 5206334 - 5206322 - G 70 -9.1 -3.61178 | TTCACTCACGGCAAA CCTGG ACC CCAGG GCGCCCTTGAACATG HRM2_46270 5208053 - 5206476 - | putative ABC sugar transporter, fused ATPase subunits TERM 5867 5207293 - 5207306 + g 84 -2.3 -5.60993 | AAGCAGAGCACCTCT CGTCC GGGC GAACG TTTTTTTCTAACAAC TERM 5868 5207825 - 5207849 + g 87 -4.2 -5.40072 | gap 1, opp_overlap 5207806, overlap 5207825 5207826 CCCCGGCGTCCAGGG C-TGCCCGTGG AGAG CCCTGGGCAAG TTTTTTTCCGAACAC TERM 5869 5208093 - 5208067 - R 76 -9.4 -3.5026 | overlap 5208084 ATAATTACACGACAA TGGGGACCTTTT TAG AATCGGTCCCCA AGGCCTAGAAGGTTG HRM2_46280 5209090 - 5208098 - | Basic membrane lipoprotein precursor HRM2_46290 5209677 - 5209477 - | hypothetical protein HRM2_46300 5210234 - 5209680 - | hypothetical protein TERM 5870 5210111 - 5210098 - G 70 -2.3 -4.99035 | GCATTCATACAAAAA GCCAG AACC CTTGC CATCATTCGCTCAAG TERM 5871 5210538 - 5210569 + r 71 -10.1 -2.59632 | opp_overlap 5210539, overlap 5210537 5210535 TGGGTGCGGGAAAAA AGCCCTGAATGCC ACGACC GGCATGCAGGGCC CTGTCTATTTTTACC TERM 5872 5210568 - 5210539 - R 100 -14.3 -5.00616 | opp_overlap 5210538 5210537 5210535 GGGTGCGGGAAAAAA GCCCTGAATGCCA CGAC CGGCATGCAGGGC CCTGTCTATTTTTAC HRM2_46310 5210774 - 5210580 - | hypothetical protein TERM 5873 5210732 - 5210745 + g 79 -6.7 -4.67904 | overlap 5210725 CTATTGCCTTGATCT TGTCG AGAT CGACA TTTTTAACGTTGCTC luxR2 5211450 - 5210899 - | LuxR2 TERM 5874 5211133 - 5211119 - G 73 -2.8 -5.02476 | AGATGCTGCAAAAAA GGAGAT GCG ATTTCC TGGAGCCCTTTTTCA HRM2_46330 5211678 - 5212076 + | hypothetical protein dnaG6 5212377 - 5212748 + | DnaG6 TERM 5875 5212962 - 5212979 + G 70 -9.9 -3.28924 | opp_overlap 5212961 5212960 AGGTTATCAGCAATT TGTCTCC AATT GGAGACA TTCTCCCCAGCAATG HRM2_46350 5212748 - 5213329 + | hypothetical protein TERM 5876 5213472 - 5213458 - gf 86 -5.6 -5.28683 | opp_overlap 5213471 ATCAATATCAAAAAA CCGGCA TTA TTCCGG GGCCACTCCTACTTG TERM 5877 5214750 - 5214734 - gf 91 -5.1 -5.40474 | ATTGCCGGAAAAAAA TGAACTG GAC CAGATCA TCGACTTTTTGGAGC HRM2_46360 5213316 - 5215004 + | hypothetical protein HRM2_46370 5214928 - 5215674 + | hypothetical protein TERM 5878 5215800 - 5215831 + T 100 -11.1 -5.27938 | gap 1, opp_overlap 5215797 5215802 5215804 ATAATTAAATCAGGA TAGACCATTACGCT TTTTT AGCG-AATGGTCTA TTTTTGTTTACAACT TERM 5879 5215829 - 5215802 - T 71 -9.3 -2.90456 | gap 1, opp_overlap 5215800, overlap 5215797 5215804 AATTAAATCAGGATA GACCATTACGCT TTTTT AGCG-AATGGTC TATTTTTGTTTACAA HRM2_46380 5216383 - 5215982 - | sensor signal transduction histidinekinase (PAS/PAC domain protein) HRM2_46390 5216745 - 5216536 - | hypothetical protein HRM2_46400 5217820 - 5216975 - | Putative integral membrane protein TERM 5880 5217227 - 5217217 - G 80 -3.2 -5.32882 | GATGATTACAAAAAA CGTC CTT GACA ACACCCGGTCGGATA TERM 5881 5217292 - 5217280 - G 79 -9.1 -4.21676 | ACAAGGTATTCAAAA GGGAG AGA CTCCC GTAAAACCCCAAAGA TERM 5882 5217543 - 5217531 - G 70 -10.5 -2.96274 | CCCGTTACAACCAGA GGGGC TAC GCCCC GTGCCAGGGGATACA TERM 5883 5217546 - 5217564 + g 71 -10.2 -3.05816 | GGGGCTACGCCCCGT GCCAGGGG ATA CACCTGGC TTAGATCACCAATAC aapP2 5218579 - 5217842 - | AapP2 TERM 5884 5218207 - 5218230 + g 74 -6.6 -4.29396 | opp_overlap 5218208 5218209, overlap 5218208 TCACCCGTTCAAGTA ATGCCATGGC CGTT GCCATGGCCG TTTTCCTGGGTAGTT TERM 5885 5218229 - 5218208 - G 72 -10.1 -3.34013 | opp_overlap 5218208 5218207, overlap 5218209 CACCCGTTCAAGTAA TGCCATGGC CGTT GCCATGGCC GTTTTCCTGGGTAGT TERM 5886 5218228 - 5218209 - G 78 -13.6 -2.60194 | opp_overlap 5218208 5218207, overlap 5218208 ACCCGTTCAAGTAAT GCCATGGC CGTT GCCATGGC CGTTTTCCTGGGTAG HRM2_46420 5219750 - 5218596 - | ABC-type branched-chain amino acid transport-system, permease component HRM2_46430 5220913 - 5219753 - | ABC-type branched-chain amino acid transport-system, permease component TERM 5887 5220022 - 5220044 + g 71 -10.4 -3.10409 | CTTTTCTCATGGTCA GGCCCGGTGG CAA CCCCAGGGCC TTGGATGAATTGATC HRM2_46440 5221913 - 5220915 - | amino acid-binding periplasmic amino acid binding protein TERM 5888 5221440 - 5221415 - G 86 -8.3 -4.72272 | opp_overlap 5221387 TTTTGCCATCAAAAA CAAGGGCCTCA ATTT TAAGGCCGTTG GCCCTGGCAAAATCG nodC 5223501 - 5222101 - | NodC TERM 5889 5222858 - 5222868 + g 73 -5.4 -4.62471 | ACATCCAGCATCCTG GGAA TCA TTCC TTTTTCCCGGTTAAG TERM 5890 5223141 - 5223159 + g 84 -2.3 -5.65927 | overlap 5223144 CCTGGCTGCCGTCAT CAACGGC AATGA GCTGTAG TTTTTTCTTTGGATA TERM 5891 5223890 - 5223920 + G 77 -10.5 -3.53012 | gap 1 TTTATTCATGACCGG GGCCA-TGGTGACG GCAT CGTCAACAATGGCC TTTGCCGGAGACGCG amtB 5223861 - 5225156 + | AmtB HRM2_46470 5227139 - 5225151 - | AmtB TERM 5892 5225642 - 5225624 - G 100 -7.5 -5.60993 | opp_overlap 5225626 GTGCTGACAAAAAAA GATCCTT AATAA AAGGATC CGTTAAAATGTTTGA TERM 5893 5225758 - 5225780 + g 76 -11.4 -3.26471 | opp_overlap 5225757 5225756, overlap 5225762 CGGGTTTCTACAATG TTGACCATGG CTT CCATGGTTAA TTGCTGTGAACCTGC TERM 5894 5225762 - 5225776 + g 72 -10 -3.43071 | opp_overlap 5225757 5225756, overlap 5225758 TTTCTACAATGTTGA CCATGG CTT CCATGG TTAATTGCTGTGAAC TERM 5895 5226488 - 5226463 - G 89 -10.3 -4.34223 | opp_overlap 5226452 AACTCAATCAACAAA GGGGTCTGCCT GAGA AGGCCGTCCCC ATCATGCTGATTGTT ompA3 5227751 - 5227161 - | OmpA3 TERM 5896 5227746 - 5227736 - G 73 -3.2 -4.94703 | AACAGAAAAAAAGAA CCGA ATA TCGA ACCATATCAAACTCC HRM2_46490 5228222 - 5227764 - | hypothetical protein HRM2_46500 5230107 - 5228377 - | hypothetical protein TERM 5897 5229244 - 5229259 + g 74 -7.5 -4.14392 | opp_overlap 5229225 GGCCGTCTCGGTCAA GGCCC GGCTCA GGGCC TTTTCCGGATTCGGG HRM2_46510 5230765 - 5230127 - | S-adenosylmethionine-dependent (SAM) methyltransferase metX 5231966 - 5230755 - | MetX TERM 5898 5232771 - 5232743 - g 76 -12.5 -2.63913 | CATGATGGCAGAGGA GGGAGCCATCA CGGCCAT TGACGGCTCCC GGATAAAACTTGAAG HRM2_46530 5232135 - 5232896 + | putative lactam utilization protein TERM 5899 5233425 - 5233412 - g 88 -3.7 -5.64274 | TCACCCAGAAAAAAA GTGCC TGCA GGCTC GGTGGGCATCGCAAA HRM2_46540 5232893 - 5233645 + | putative allophanate hydrolase subunit 1 TERM 5900 5233788 - 5233766 - g 78 -9.8 -3.90744 | TCTTCTGGTAAACAA CCAGGCCAAC GAC GCTGTCCTGG AAATCACCTTTTTCG TERM 5901 5234199 - 5234213 + G 79 -7.1 -4.66609 | overlap 5234196 GACCATTACTTTGAT CAGGG GCTGA CCCTG TTTTTCAATGCCGTA HRM2_46550 5233623 - 5234678 + | putative allophanate hydrolase subunit 2 rseC 5234779 - 5235237 + | RseC HRM2_46580 5235535 - 5235278 - | hypothetical protein HRM2_46570 5235062 - 5235451 + | hypothetical protein TERM 5902 5235640 - 5235652 + Tr 77 -10.5 -3.14132 | AGCAGAGACCATGCT CCGGC CAT GCCGG TTAATCAGGAAAGGA uspA8 5236099 - 5235653 - | UspA8 TERM 5903 5236187 - 5236173 - H 73 -10 -3.03605 | overlap 5236168 ATAGCAACAACCATA CCACAC GAG GTGTGG GGACGTTCAATGGCA TERM 5904 5236984 - 5236968 - H 82 -2.2 -5.60993 | overlap 5236969 5236972 TTTCTTATAAAAAAA CCCACA TGTCC TGCGGA CACAACGAAGATAGA TERM 5905 5237930 - 5237918 - g 100 -5.5 -5.7946 | overlap 5237919 GCCTTAAGAAAAAAA CGCAG GAA CTGCA TAAAAGCCTTAATGG TERM 5906 5238324 - 5238307 - g 86 -2.7 -5.5604 | gap 1 GCAATCAAGAAAAAA GGCTCTTA TTA CAAG-GCC AAATATTACAAACTG HRM2_46600 5237287 - 5238543 + | transposase for insertion sequences IS116, IS110 and IS902 (IS111A/IS1328/IS1533 family protein) TERM 5907 5238932 - 5238920 - T 91 -10.5 -4.128 | AGTGTTACATATAAA CCGGC ACG GCCGG AGCGTGGTATGGCTC TERM 5908 5239024 - 5239012 - T 100 -10.5 -5.24129 | overlap 5239014 GTTTCTTATAAAAAA CCGGC ATG GCCGG AGCATGGTATCTGCC HRM2_46610 5241459 - 5239414 - | UBA/THIF-type NAD/FAD binding family protein TERM 5909 5240926 - 5240910 - G 83 -13.7 -3.28269 | AATCGTCAAATGCAA TGCCCCG ATC CGGGGCA AAAACCAGCATGGCT TERM 5910 5240943 - 5240931 - G 71 -5.5 -4.57073 | overlap 5240932 5240935 GATCCGGGGCAAAAA CCAGC ATG GCTGA GCCAAATCCCAGAGG TERM 5911 5241621 - 5241609 - H 71 -9.1 -3.29461 | CAATTTCCTCCACAA GGACC CAT GGTCC AGATACCATCTCAAT TERM 5912 5242227 - 5242214 - g 100 -8.1 -5.28481 | opp_overlap 5242214 5242213 CATTTAAGGAAAAAA GGCAG CGCC CTGCC ATTATCCTGGGGCTT HRM2_46620 5241760 - 5242500 + | hypothetical protein HRM2_46630 5243334 - 5242843 - | hypothetical protein TERM 5913 5242991 - 5242973 - G 100 -3 -5.86332 | overlap 5242975 5242984 TGAACCGAAAAAAAA TGGGTGGC AAA GGCACCAA GCACCTTACTGTAAA TERM 5914 5244571 - 5244537 - g 70 -2.8 -4.77157 | opp_overlap 5244547 TGAATCCACTAAAAA TGGAAAATTCTGGGAG GTG CTCGCCCATTTTTCCA ACATCAACTACGCCT HRM2_46640 5243893 - 5244876 + | TRAP-type C4-dicarboxylate transport system periplasmic component TERM 5915 5244899 - 5244922 + G 82 -10.3 -3.87641 | opp_overlap 5244899 5244901, overlap 5244897 CATTCAATTCATAGA GAGGCTCTC ACTTTG GGGAGCCTC TTTGTCCGCAGTGTT TERM 5916 5245112 - 5245137 + G 77 -11.1 -3.34501 | CACCCTGGTCACCTC CCTGGTGGGCG AGCG TGCCAACCAGG TTCTGAACATTATGT HRM2_46650 5244873 - 5245349 + | TRAP-type C4-dicarboxylate transport system, small permease component HRM2_46660 5245346 - 5246680 + | putative TRAP C4-dicarboxylate transport system permease DctM subunit TERM 5917 5247448 - 5247428 - g 80 -2.5 -5.42259 | GGAGTGGTAAAAAAA GGAGATAAA CTT TTGATCACC CTGAGAAAGCCGGAA TERM 5918 5247541 - 5247510 - g 79 -6.5 -4.74103 | gap 1, opp_overlap 5247520 GCGGCAAGGTAAAAA CCGGCGAGCAGGCC TCTTC GGCCTG-TGTCCGG GAACTTGCCGAAGAA mutY 5246717 - 5247811 + | MutY nrdA 5250070 - 5247860 - | NrdA TERM 5919 5248881 - 5248900 + g 70 -11.4 -2.55213 | TCAAACACTCCCCTC TCCTGGGC AAGG GCCCGGGA TGCCTTGCGTGCCTC TERM 5920 5250117 - 5250093 - R 71 -10.1 -2.70932 | opp_overlap 5250095, overlap 5250095 CCTCCCGGTTAAGTA TACCCTATCGT GTG ACCATAGGGTA TATACACACAATATG HRM2_46690 5251804 - 5250212 - | putative signal transduction protein TERM 5921 5250402 - 5250391 - G 76 -5.8 -4.6856 | CAAATACGGGAAAAA CAGC GATG GCTG AAGATATCTCATCTC TERM 5922 5250667 - 5250657 - G 85 -4 -5.45802 | TGGGTAAAATAAAAA CTTT TAA AAAG GGTCTCTACTATACT TERM 5923 5252149 - 5252161 + G 70 -3.3 -4.8622 | AAAAGAAGAATCGTT GGCCA CCC TGCCC TTTTTCCTTACGGAC TERM 5924 5252215 - 5252231 + G 73 -2.9 -4.91511 | opp_overlap 5252217 5252218, overlap 5252217 5252218 GCTGCGCGCCGGACA AATCGGT GTG ACCGGTC TTTTTGTGATCCCCT HRM2_46700 5251922 - 5252932 + | TPR-repeat-containing protein with CheY-like receiver HRM2_46710 5253759 - 5252941 - | Putative Fe-S cluster HRM2_46720 5254072 - 5253773 - | hypothetical protein braF 5255062 - 5254271 - | BraF TERM 5925 5254788 - 5254810 + gr 79 -11.2 -3.14132 | ACGTTCTGGAAGGTC CGGGTGATCC CCC GGGCCACCCG TTGGTGAACGGGCAA TERM 5926 5254876 - 5254855 - GR 73 -5.9 -4.47707 | gap 1, overlap 5254858 GTCCATTAAAAACAA TATCGCCCCG GTC CGGAGC-ATA AACCCCTGTGATCAG TERM 5927 5255029 - 5255041 + gr 91 -3.3 -5.81412 | GCACCTTTAAAAGGC GGTCA TCA TGCCC TTTTTTTTCGATAAC HRM2_46740 5255999 - 5255034 - | ABC-type branched-chain amino acid transport-system, ATP-binding protein TERM 5928 5255342 - 5255319 - GR 83 -3 -5.40474 | gap 1, overlap 5255320 5255321 ATGGGCGTAAAAAAA GCCGGCCATAG CCC CAAGGGCCG-C ACTGAACATAAAGAT HRM2_46750 5256871 - 5255996 - | ABC-type branched-chain amino acid transport-system, permease component HRM2_46760 5258039 - 5256882 - | Extracellular ligand-binding receptor TERM 5929 5257863 - 5257881 + g 87 -4.6 -5.42259 | AGCATTGATCTTATC GACCAT CATCTCC ATGGTC TTTTTTTCAGGATCG TERM 5930 5258749 - 5258727 - g 77 -10.6 -3.56593 | overlap 5258745 ACTGGACAATCACAA GATCCCCTTC CAT GAAAGGGACC ACGGCCAGCTGTTTT TERM 5931 5258953 - 5258978 + G 83 -13.3 -3.32844 | gap 1 GGCGGGCTCTCCATC CCCGGGGTGGGT GCA ACCC-CCCTGGG TTATAAAATCGCCGA HRM2_46770 5258458 - 5259639 + | hypothetical protein TERM 5932 5259634 - 5259678 + TF 100 -14.4 -3.76182 | gap 2, opp_overlap 5259642, overlap 5259634 5259636 GTGGCCGGTCAGTAT GCCTGAAACGGGCAGTCCATGG CGA CCG-GGTCTGCCTGTTTC-GGC CTTTTTTCTCCATGG TERM 5933 5259634 - 5259679 + TF 100 -13.3 -5.28778 | gap 1, opp_overlap 5259642, overlap 5259634 5259636 GTGGCCGGTCAGTAT GCCTGAAACGGGCAGTCCATGG CGA CCG-GGTCTGCCTGTTTCGGCC TTTTTTCTCCATGGT TERM 5934 5259636 - 5259677 + TF 100 -14.5 -2.84986 | gap 1, opp_overlap 5259642, overlap 5259634 5259634 GGCCGGTCAGTATGC CTGAAACGGGCAGTCCATGG CGA CCG-GGTCTGCCTGTTTCGG CCTTTTTTCTCCATG HRM2_46780 5260439 - 5259627 - | putative haloacid dehalogenase-like family protein TERM 5935 5259837 - 5259824 - Gf 76 -9.5 -3.40601 | opp_overlap 5259823 CAAAGGGAACATGAA CGGCG GTTG CGCCG ATGTTGACCACGGGC TERM 5936 5259893 - 5259911 + gF 75 -7.4 -4.26076 | opp_overlap 5259895 CCACCATCATGAACT CATGGGCT GCA ATCCCATG TTTTCGTAGCACTCG HRM2_46790 5260416 - 5260583 + | hypothetical protein HRM2_46800 5260710 - 5261627 + | putative Glycine cleavage system H protein HRM2_46810 5262748 - 5261630 - | putative NADH dehydrogenase, FAD-containing subunit HRM2_46820 5263683 - 5262763 - | rhodanese-like domain protein TERM 5937 5263692 - 5263704 + r 100 -10.5 -4.53303 | overlap 5263666 ATGCCATCCCTCGCT CCGGC CGT GCCGG TTTTATATGAAACTC HRM2_46830 5264557 - 5263949 - | hypothetical protein TERM 5938 5264353 - 5264363 + g 72 -8.2 -3.82824 | opp_overlap 5264348 GCAGAAAAGCCTCCA GGCC CTG GGCC TTGTTCTGCATCATC HRM2_46840 5265187 - 5264705 - | putative Zinc metalloprotease HRM2_46850 5266596 - 5265244 - | response regulator TERM 5939 5265886 - 5265876 - G 76 -3.2 -5.06414 | TTTCGTCAAGAAAAA GAGT CCC ACCC TCGACCACCTCAAAA TERM 5940 5266662 - 5266626 - R 73 -8.7 -3.56643 | overlap 5266627 5266629 CCTATAGGTCCGAAA CCAGGGGAAAGGTCATC TTG AACGAACTTCCCCCTGC CGCTTGGTTTGTTGC TERM 5941 5266661 - 5266627 - R 83 -12.2 -2.73771 | overlap 5266626 5266629 CTATAGGTCCGAAAC CAGGGGAAAGGTCATC TTG AACGAACTTCCCCCTG CCGCTTGGTTTGTTG HRM2_46860 5268141 - 5266612 - | signal transduction histidine kinase TERM 5942 5266875 - 5266889 + g 70 -11.4 -2.55015 | overlap 5266872 ACACAATCATGAGTC TGCCCC CCT GGGGCA TGGCTTCGATGGCGT TERM 5943 5267950 - 5267989 + g 73 -10.6 -3.25823 | opp_overlap 5267951, overlap 5267951 ATTCGTGGTGTATAT ACCCATGGCCTTGGCCAT GGTA ATGCCCTCGGCCATGGGA TTGATATCACAGACA TERM 5944 5267988 - 5267951 - G 83 -14.1 -2.87132 | opp_overlap 5267950 5267951 TTCGTGGTGTATATA CCCATGGCCTTGGCCAT GGTA ATGCCCTCGGCCATGGG ATTGATATCACAGAC TERM 5945 5267951 - 5267988 + g 81 -14.1 -2.55351 | opp_overlap 5267951, overlap 5267950 TTCGTGGTGTATATA CCCATGGCCTTGGCCAT GGTA ATGCCCTCGGCCATGGG ATTGATATCACAGAC TERM 5946 5268272 - 5268294 + H 78 -2.1 -5.5112 | CTATTTGATCCACCC CAAGAAA CAGCCGTAT TTTCTTG TTTTTTATTGATCAG TERM 5947 5268683 - 5268666 - g 70 -2.7 -4.82901 | overlap 5268639 CGGGCCGCAGAAAAA GCTGATA TTTA CATCAAC GCCTCCTGCAACGGC HRM2_46870 5268375 - 5270471 + | metal-binding protein TERM 5948 5270483 - 5270473 - f 77 -4.6 -5.04377 | overlap 5270474 5270476 5270478 TGAAAATAAAATAAA CGAC ATG GCCG GAGCAGGTTATCTGC TERM 5949 5270507 - 5270478 - f 100 -14.4 -3.18991 | gap 1, overlap 5270473 5270474 5270476 ATAAAATAAACGACA TGG-CCGGAGCAG GTTAT CTGCTCCGGTCCA ACAAATAATACACGC TERM 5950 5271536 - 5271575 + G 70 -4.3 -4.63486 | gap 1 TCGAACTTCCACCCC TGAGGGACC-GCATGG AAGATATCC CCCTGCTGGTCGCTCA TTTTATTACACGGCT HRM2_46880 5270584 - 5271969 + | sigma-54 dependent transcriptional regulator (PAS domain protein) HRM2_46890 5272283 - 5272855 + | hypothetical protein HRM2_46900 5272903 - 5273283 + | hypothetical protein TERM 5951 5273882 - 5273867 - g 74 -4 -4.99947 | TGTAATCAAAGAAAA CTTTGA CCCG CCAAAG GAGATACGGGCCATG HRM2_46910 5273289 - 5274035 + | metallo-beta-lactamase family protein TERM 5952 5274076 - 5274049 - T 84 -2.6 -5.73672 | gap 1, opp_overlap 5274049 AAATAATCAAAAAAA GCGGGGGCTGC CCATCAT AC-GCCCTCGC TTTTATTCACCTATA TERM 5953 5274049 - 5274076 + T 71 -4.8 -4.66987 | opp_overlap 5274049 AAATAATCAAAAAAA GCGGGGGC TGCCCATCATAC GCCCTCGC TTTTATTCACCTATA HRM2_46920 5275277 - 5274192 - | hypothetical protein HRM2_46930 5276386 - 5275277 - | hypothetical protein TERM 5954 5276217 - 5276206 - G 70 -2.2 -4.93877 | CGGTACGAAACAAAA CAGT ACAG ACCG CCCCCACCATCCACC TERM 5955 5276312 - 5276279 - G 71 -6.7 -4.15788 | gap 1 AAGGGCTGTAACAAA TGCC-GCAAGACAGCA TAT CGCGGCCTTACCGGCA TATCTGGCAATGAAA HRM2_46940 5277432 - 5276620 - | putative methyl-accepting chemotaxis protein TERM 5956 5277834 - 5277863 + r 93 -13.6 -2.89039 | opp_overlap 5277834 CCCCAAACCCAAAAA GCCCTGGCCATC AATAAA GATGACCAGGGC TATATAAAAATAATT TERM 5957 5277863 - 5277834 - R 100 -15.8 -4.81249 | opp_overlap 5277834 CCCCAAACCCAAAAA GCCCTGGCCATC AATAAA GATGACCAGGGC TATATAAAAATAATT TERM 5958 5278056 - 5278014 - R 73 -5.5 -4.6526 | opp_overlap 5278018, overlap 5278017 5278019 ATAAAGTCTGAAAAA GAACAGGACACCCTGAAGC ATAAA ACTTCAGGGTGCCCCTATA TAAAAATAACCCGGC TERM 5959 5278053 - 5278017 - R 100 -11.6 -4.42235 | opp_overlap 5278018, overlap 5278014 5278019 AAGTCTGAAAAAGAA CAGGACACCCTGAAGC ATAAA ACTTCAGGGTGCCCCT ATATAAAAATAACCC TERM 5960 5278018 - 5278052 + r 72 -10 -2.88544 | opp_overlap 5278017 5278014 5278019 AGTCTGAAAAAGAAC AGGACACCCTGAAG CATAAAA CTTCAGGGTGCCCC TATATAAAAATAACC TERM 5961 5278051 - 5278019 - R 100 -16.4 -3.80746 | opp_overlap 5278018, overlap 5278017 5278014 GTCTGAAAAAGAACA GGACACCCTGAAGC ATAAA ACTTCAGGGTGCCC CTATATAAAAATAAC TERM 5962 5279878 - 5279894 + r 83 -9.4 -3.93963 | TTGGGCTATCGGCGA GGGGGT TTCTC ACCCCC TTTATCGCTACTCAT TERM 5963 5281497 - 5281479 - R 76 -6.8 -4.56978 | overlap 5281491 TTGTCAAAGAACAAA GAATCAAT TAA ATTGATCC CTCAAAACCGGTTAG TERM 5964 5282379 - 5282368 - R 70 -7.2 -3.85698 | opp_overlap 5282376 GTTTCGGTCCAGAAA GGCG CCTT CGCC ACCGGTGTTCCTCCT TERM 5965 5283163 - 5283133 - R 83 -11.3 -3.03635 | opp_overlap 5283128 5283162, overlap 5283162 TAAATTCTTTGAATA TCTTTTGTGTGCT TTCAC AGCACTCAAAAGA CACGCTTCGTCTCTT TERM 5966 5283290 - 5283245 - R 85 -4.1 -5.47159 | CCTGAACACAAAAAA GTCTTTGTAAGAAGCGT TGTGAAAAATGT TCGCGTCTCACAAAGAC CCAAGCGTTTTACGT TERM 5967 5283520 - 5283553 + r 100 -13.3 -3.92324 | gap 1, opp_overlap 5283516, overlap 5283523 TGACAGATTAATTGC TAAGCCCTGACCA-GG TTT CCATGATCAGGGCTTA TTTAGTGTTCGCCCA TERM 5968 5283523 - 5283550 + r 91 -10.6 -4.08853 | gap 1, opp_overlap 5283516, overlap 5283520 CAGATTAATTGCTAA GCCCTGACCA-GG TTT CCATGATCAGGGC TTATTTAGTGTTCGC hdrD5 5284824 - 5283628 - | HdrD5 HRM2_47000 5286305 - 5284875 - | FAD-linked oxidase family protein (FAD-binding/FAD-oxidase domain protein) TERM 5969 5285954 - 5285964 + g 72 -8.2 -3.90766 | opp_overlap 5285953 GCCCCGGACCAAATT CGGC ATA GCCG TTCTCTTTATCAATA HRM2_47010 5287005 - 5286361 - | hypothetical protein TERM 5970 5287129 - 5287109 - R 75 -5.3 -4.83615 | CATGGTCTACAAAAA CCTGCAGGT TTT ACCTGTGGG GCCATACATTCCGTT HRM2_47020 5287996 - 5287319 - | putative transcriptional regulator TERM 5971 5289592 - 5289582 - H 81 -5.4 -5.09225 | AGCCGACGCAAAAAA CAAC GCG GTTG AATAGCGGTGTTTTA TERM 5972 5291032 - 5291061 + H 100 -13.7 -3.49475 | opp_overlap 5291032 TTCCAAACAAAAAAA GTCCTGACCATCA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 5973 5291061 - 5291032 - H 100 -15.9 -5.95539 | opp_overlap 5291032 TTCCAAACAAAAAAA GTCCTGACCATCA TAAA TGATGATCAGGAC TTATATAAAAATAAC TERM 5974 5292889 - 5292905 + H 83 -9.4 -3.93963 | TTGGGCTATCGGCGA GGGGGT TTCTC ACCCCC TTTATCGCTACTCAT TERM 5975 5294508 - 5294490 - H 76 -6.8 -4.56978 | overlap 5294502 TTGTCAAAGAACAAA GAATCAAT TAA ATTGATCC CTCAAAACCGGTTAG TERM 5976 5295390 - 5295379 - H 70 -7.2 -3.85698 | opp_overlap 5295387 GTTTCGGTCCAGAAA GGCG CCTT CGCC ACCGGTGTTCCTCCT TERM 5977 5296174 - 5296144 - H 83 -11.3 -3.03635 | opp_overlap 5296139 5296173, overlap 5296173 TAAATTCTTTGAATA TCTTTTGTGTGCT TTCAC AGCACTCAAAAGA CACGCTTCGTCTCTT TERM 5978 5296301 - 5296256 - H 85 -4.1 -5.47159 | CCTGAACACAAAAAA GTCTTTGTAAGAAGCGT TGTGAAAAATGT TCGCGTCTCACAAAGAC TCAAGCGTTCTACGT TERM 5979 5297385 - 5297373 - g 84 -10.5 -4.11484 | TCGAATCGTTCAAAA GGCCG CTT CGGCC CTGGAACCGGGCGGA HRM2_47060 5296621 - 5297628 + | SAM-dependent methyltransferase HRM2_47070 5297641 - 5298417 + | enoyl-CoA hydratase HRM2_47080 5298436 - 5299830 + | putative proline aminopeptidase TERM 5980 5299993 - 5300034 + G 70 -11.6 -2.54371 | opp_overlap 5299988 AACGCCAAGATTCCA GACGCCATCGCCTTCAGA ATCACC TCTGAAGTCCAGGGCGTC TGCCTTACCGTCATT TERM 5981 5301142 - 5301131 - g 73 -5.8 -4.57533 | AACAATACCAGAAAA GCAC CTAT GTGC GGTTGAGCGACGGAA TERM 5982 5301694 - 5301651 - g 74 -4 -5.02074 | gap 1, overlap 5301656 5301659 CCATGCCCGAAAAAA CAACATCATC-CTCACCAC CTATGCC GTGGTGAGAAACGACATCG AAACCCTGAAGGATG TERM 5983 5301887 - 5301902 + G 73 -6.1 -4.57073 | TGAACCCCTCCATGT TCGGC ACCACC GCCGA TTTTTCCCGCAACTA TERM 5984 5302156 - 5302140 - g 100 -8.7 -5.08169 | opp_overlap 5302139 5302150 AGAGATCGCAAAAAA GGGACTG AAA CAATCCC AATTGTTCGTTCTCC TERM 5985 5302561 - 5302545 - g 71 -5.7 -4.36914 | CGTTGCCGCAGAAAA CCAGGCC ATT GACCGGG CCCACAGGATGGGGC HRM2_47090 5299918 - 5302746 + | putative helicase TERM 5986 5303201 - 5303189 - g 74 -7.7 -4.27617 | CACATGGCAGCAAAA GGCAA ATA TTGCC CGGGCCGCCTATTGC TERM 5987 5303768 - 5303790 + G 71 -7.6 -4.03234 | opp_overlap 5303771 5303774 GCTCTATATCTGCAA GGACAAGACC TAT GGCCTTGACC TTTATATGGCCGAAC TERM 5988 5303942 - 5303920 - g 95 -15 -3.9644 | opp_overlap 5303896 5303918 TGTTCAACACAAGAA GGTCCTATAG TGG CTATAGGACC AATAAATTTGAAATC TERM 5989 5304050 - 5304060 + G 82 -6.8 -4.82901 | opp_overlap 5304050 GGAGGTGGAAAAAAA GGTG GAC CACC TTTTTATGGACAACC TERM 5990 5304060 - 5304050 - g 100 -6.8 -5.42259 | opp_overlap 5304050 GGAGGTGGAAAAAAA GGTG GAC CACC TTTTTATGGACAACC TERM 5991 5304459 - 5304445 - g 76 -4.3 -4.92756 | ATCATGAAAAACAAA TAAGG AGCCA CCTTA AAAAGATCCTGGAAT TERM 5992 5304779 - 5304767 - g 70 -2.6 -4.9218 | CAGGGAGTACAAAAA GCCC TATCT GAGC CCCTTTGATGGCCTT HRM2_47100 5302749 - 5305322 + | hypothetical protein TERM 5993 5305700 - 5305755 + G 76 -6.1 -4.60041 | overlap 5305703 AAAGAGACCGTTCAT GACCCTGGCCAGCATGCAGAATG CCATCTATAT CGTTCTGCCCATTGGCCAGGTTC TTTTTGCCGATCAGT TERM 5994 5305703 - 5305752 + G 71 -6.4 -4.41633 | overlap 5305700 GAGACCGTTCATGAC CCTGGCCAGCATGCAGAATG CCATCTATAT CGTTCTGCCCATTGGCCAGG TTCTTTTTGCCGATC TERM 5995 5305991 - 5306016 + G 100 -11.1 -5.18726 | ATCCCTGGATTTACT CGGCCAGGCGA CGGT TCCCCTGGCTG TTTTTATTCTGGGCG HRM2_47110 5305398 - 5306348 + | putative permease HRM2_47120 5307427 - 5306354 - | hypothetical protein TERM 5996 5307206 - 5307176 - G 82 -11.1 -3.74693 | gap 1 GGCCAGTCGATCAAA GGCCGCGGC-CGGA TCAT TCTGGGCCGCAGCC GCCGACTTCCATGAA TERM 5997 5307857 - 5307843 - g 100 -10 -5.18995 | AATACAATAGAAAAA CAGCAG CGT CTGCTG GCAAAGACCCTGAAG fdhE2 5307825 - 5308754 + | FdhE2 TERM 5998 5308803 - 5308819 + F 76 -10.1 -3.25823 | opp_overlap 5308800 TATTTTAAAAACCTC CGCCGGA CTG TCCGGTG TTGATATGGAAACCC TERM 5999 5309003 - 5309025 + G 70 -10.6 -3.01712 | opp_overlap 5309002 5309003, overlap 5309010 AGAAATTTTGTAAAG CTTGCATCTG CGG CAGCTGCAAG TATTGCAGCAGCACC TERM 6000 5309429 - 5309419 - g 100 -4.6 -5.7946 | CTTTGAAGAAAAAAA CGCC GAC GGCA AGGTGGTCAACCGAA TERM 6001 5309577 - 5309593 + G 70 -8.7 -3.53811 | ACAGCGCTACAGTTG CGGCTCT GGG AGAGTCG TTTGGACGCGGTGCA fdhA8 5308973 - 5312032 + | FdhA8 fdhB8 5312032 - 5312793 + | FdhB8 TERM 6002 5313111 - 5313099 - g 70 -9.1 -3.62539 | opp_overlap 5313099, overlap 5313090 5313108 CATCAATGAAACCAA GGGCT ACA AGCCC TACTTCAAGGCCATG HRM2_47160 5312818 - 5313246 + | cytochrome c, class III family protein TERM 6003 5313280 - 5313260 - f 100 -11.1 -5.21236 | AACGGATAAGAAAAA TGCACCGGC CAT GCCGGTTCA CATGGAACAACACCA TERM 6004 5313289 - 5313331 + F 100 -14.8 -3.60098 | opp_overlap 5313291, overlap 5313290 5313293 CGGTTCACATGGAAC AACACCAGGGCCGCCCAT GGCAGTA AAGGGCGGCCCTGGTGCA TTTCCCCTGGCAACT TERM 6005 5313290 - 5313330 + F 100 -18.3 -2.75844 | opp_overlap 5313291, overlap 5313289 5313293 GGTTCACATGGAACA ACACCAGGGCCGCCCAT GGCAGTA AAGGGCGGCCCTGGTGC ATTTCCCCTGGCAAC TERM 6006 5313329 - 5313291 - f 100 -21.8 -3.70773 | opp_overlap 5313290 5313289 5313293 GTTCACATGGAACAA CACCAGGGCCGCCCAT GGCAGTA AAGGGCGGCCCTGGTG CATTTCCCCTGGCAA TERM 6007 5313293 - 5313327 + F 100 -18.6 -2.65354 | opp_overlap 5313291, overlap 5313290 5313289 TCACATGGAACAACA CCAGGGCCGCCCAT GGCAGTA AAGGGCGGCCCTGG TGCATTTCCCCTGGC HRM2_47170 5313370 - 5313624 + | putative acyl carrier protein HRM2_47180 5318906 - 5313684 - | putative ATP-dependent DNA helicase TERM 6008 5314423 - 5314434 + g 74 -2.2 -5.19879 | ATCTGCCCGATCTGA TCCG TCCA TGGA TTTTTCTGTTTGAAC TERM 6009 5314746 - 5314728 - G 74 -7.4 -4.15044 | opp_overlap 5314728 5314730 5314731, overlap 5314730 5314731 CTTTTGGGCAACAAA CACCGCCT GGG AGGCGATA TCTTTAACCTGGACC TERM 6010 5315480 - 5315518 + g 71 -5.8 -4.34482 | opp_overlap 5315478 5315477, overlap 5315477 5315482 AACGATGAACAATGG TTCGGGTCTTGCCCGAGC CGG GTCCGGCCAGGACCAGTA TATTTTTTTCAGGGG TERM 6011 5315482 - 5315516 + g 70 -8.4 -3.76885 | opp_overlap 5315478 5315477, overlap 5315477 5315480 CGATGAACAATGGTT CGGGTCTTGCCCGAGC CGG GTCCGGCCAGGACCAG TATATTTTTTTCAGG TERM 6012 5315846 - 5315871 + g 81 -12.5 -3.30441 | overlap 5315847 GAAGGGTCAGGTTCA TGGCCTGGCGG AACA CCCCCAGGCCG TTCTGCAGGGTAATC TERM 6013 5315847 - 5315870 + g 78 -13.8 -2.5805 | overlap 5315846 AAGGGTCAGGTTCAT GGCCTGGCGG AACA CCCCCAGGCC GTTCTGCAGGGTAAT TERM 6014 5316830 - 5316856 + g 70 -4.3 -4.62904 | gap 1, overlap 5316853 TCAGGCGCATGATTT CCCCGG-GAGTG ATGA CTATCTCCGGGG TTTTTGCCCCTCTTT TERM 6015 5316853 - 5316866 + g 71 -5.9 -4.34482 | overlap 5316830 GTGATGACTATCTCC GGGGT TTTT GCCCC TCTTTTTTTCAGCAC TERM 6016 5318401 - 5318415 + g 74 -10 -3.53012 | opp_overlap 5318400 5318396 5318391 5318401 TAAAATGAGATCAAT CCAGGA TCT TCCTGG TTTAACACAGAAAAG TERM 6017 5318712 - 5318726 + g 78 -6.4 -4.87133 | overlap 5318699 CCCCAGGGCAGCCCG GGTATC CTT GATGCC TTTTCTTTCAAAGGT HRM2_47190 5319278 - 5320048 + | SucD4 sucD4 5322731 - 5320038 - | SucD4 acsM4 5324543 - 5322777 - | AcsM4 TERM 6018 5323673 - 5323649 - G 71 -7.9 -4.07568 | GTTCCCGGTCTAAAA TTCGATACCAG CGC CCGGCATCAAA GTCGGCTTCGTCAAC tapB 5324870 - 5326741 + | TapB HRM2_47230 5326747 - 5327583 + | putative signal transduction protein HRM2_47240 5327996 - 5328394 + | putative DNA-binding protein HRM2_47250 5328397 - 5328999 + | hypothetical protein TERM 6019 5329496 - 5329507 + G 71 -5.8 -4.4078 | overlap 5329494 TTGCCTATCTGATCG GCAG CCCG CTGC TTTTACTTCCAGCCA cbiQ3 5329027 - 5329812 + | CbiQ3 TERM 6020 5330375 - 5330361 - gf 70 -5.7 -4.26903 | CCCATGGGAGCAAAA GAGGT ATTTA ACCTC CTGCACAAACTCAAC cbiO3 5329809 - 5330660 + | CbiO3 TERM 6021 5330682 - 5330658 - gT 89 -2.2 -5.84381 | GGACTAACAAAAAAA TGAACCCAAA AGAAA TTCAAGTTCA TGCCGACAACCTGAC cbiO4 5330546 - 5331463 + | CbiO4 TERM 6022 5331526 - 5331516 - T 75 -2.4 -5.34555 | CCACAGGATAAAAAA CCAC GGG GAGG GTCAAGATGGATGGG HRM2_47290 5332205 - 5331528 - | hypothetical protein TERM 6023 5331647 - 5331670 + g 73 -11 -2.94144 | overlap 5331645 ATTGAAGCCTGACGG CCCTTACCGT ATCA ACGGCAAGGG TGCTTTCCATCCAGC HRM2_47300 5332414 - 5332995 + | putative Zn-ribbon-containing protein TERM 6024 5334711 - 5334732 + G 77 -10.9 -3.56821 | opp_overlap 5334710 AGGCAACGGCAACAC TTATGGGCG GCAT CGCCCATGA TTTCAACAATCTGCT HRM2_47310 5333024 - 5335444 + | sensory box histidine kinase/response regulator TERM 6025 5336044 - 5336099 + G 85 -4 -5.40072 | gap 2, opp_overlap 5336041 5336040, overlap 5336045 5336046 GATTTTTACAATGCC TTGACCATC-CTT-GGCCAGGCCCTG GACAGG CAGGCCCGGGCCCAAGAGGTGATCCA TTTTTTTGACGCCGA TERM 6026 5336328 - 5336347 + G 79 -5.6 -4.92363 | overlap 5336330 CAGGGAAAAAATTCT GACCCTGG ACCC CCGGGTTC TTTTTCTGGATCTTT TERM 6027 5336330 - 5336344 + G 76 -7 -4.5448 | overlap 5336328 GGGAAAAAATTCTGA CCCTGG ACC CCCGGG TTCTTTTTCTGGATC TERM 6028 5336431 - 5336413 - g 76 -5.9 -4.67904 | opp_overlap 5336392, overlap 5336415 TATGAACTCCAAAAA GACCCTG TCTAT CAGGGGC TGTCAGCGGTCAAAG HRM2_47320 5335555 - 5336676 + | iron transport periplasmic binding protein HRM2_47330 5336697 - 5337767 + | ABC-type transport system, permease component TERM 6029 5338295 - 5338273 - g 82 -12 -3.65046 | opp_overlap 5338259 5338258, overlap 5338274 CCTGGATCTGAAGAA CCAGACCCAG ATT CTGGGCCTGA TCCGCCACATCATCA TERM 6030 5338294 - 5338274 - g 79 -13.3 -2.78813 | opp_overlap 5338259 5338258, overlap 5338273 CTGGATCTGAAGAAC CAGACCCAG ATT CTGGGCCTG ATCCGCCACATCATC HRM2_47340 5337764 - 5338576 + | ABC-type transport system, ATP-binding protein HRM2_47350 5338624 - 5339184 + | hypothetical protein HRM2_47360 5339260 - 5339469 + | hypothetical protein TERM 6031 5339529 - 5339554 + TF 79 -3.4 -5.40072 | opp_overlap 5339529 5339540 ACAATGCCGATAAAA TGTTGATAAG ACCATA CTTATAAACA TTTTTTTCAAAAGCA HRM2_47370 5340084 - 5339722 - | hypothetical protein TERM 6032 5339966 - 5339955 - Gf 76 -7.2 -4.3739 | CATTCCGGCACAAAA CCGG AACA CCGG ATGGGAAGCAGAAAC TERM 6033 5340119 - 5340107 - gH 73 -5.5 -4.73432 | TTAAACAGAAAGAAA GCAGA CTC CCTGC CCTGGGTCCCCTTCG uroD 5340053 - 5341411 + | UroD TERM 6034 5342213 - 5342174 - g 76 -12.1 -2.92171 | opp_overlap 5342166 5342174 5342180, overlap 5342171 GAGAGGTGGAAACCA CCGACCGCGGTTCCCTC TTTTTT GACGGAACCTCAGCCGG TATTGAGATGCGCAA TERM 6035 5342180 - 5342190 + G 70 -2.4 -5.00616 | opp_overlap 5342174 5342171, overlap 5342166 5342174 TGGAAACCACCGACC GCGG TTC CCTC TTTTTTGACGGAACC cobW 5341408 - 5342307 + | CobW TERM 6036 5342379 - 5342332 - f 100 -10.6 -4.83169 | gap 1, overlap 5342334 ATTGGTTGAGAAAAA GCCCCCAG-CCTGATACCGGTAC AGA ATACCGGTATCGGGCCTGGTCAC GTCGGGTTCCGGTCT TERM 6037 5342376 - 5342334 - f 93 -13.4 -2.6933 | overlap 5342332 TGGTTGAGAAAAAGC CCCCAGCCTGATACCGGTAC AGA ATACCGGTATCGGGCCTGGT CACGTCGGGTTCCGG TERM 6038 5343477 - 5343504 + G 70 -8.4 -3.6608 | gap 1, opp_overlap 5343464 5343463, overlap 5343502 ATCATCCCAGGGGGG TGGT-GCTGGACG GCC CGGCCGGCGACCA TTTAAATAAGATGGT npdA 5342720 - 5343556 + | NpdA TERM 6039 5343886 - 5343902 + G 76 -5.1 -4.87665 | opp_overlap 5343886 CCCGGAGGGAGACTA CCTCTAT GGA ATCGAGG TTTTTGTGGATCCAG HRM2_47410 5343575 - 5345134 + | putative hydrolase HRM2_47420 5347048 - 5345309 - | putative K+ transport system, NAD-binding component TERM 6040 5345832 - 5345844 + g 76 -4.8 -5.03747 | overlap 5345837 TTCTCCCTCTCCAGG GTCC GTGTG GGAC TTTTTTCCACAATTT TERM 6041 5347206 - 5347158 - R 100 -12 -4.66163 | ATGTCCATTTAAAAA TTCGCACAAAGCCACAAAAA GGATCATAG CCTTTGTGGCTTTGCACGAA AATAATATTTATATC TERM 6042 5347372 - 5347347 - R 78 -9.7 -3.52787 | gap 1, opp_overlap 5347341 CATGGAAGATCAGAA CCGGCAG-GGGA ATC TCCTGCTGCCGG TCAAATTATTCTTAA HRM2_47430 5348813 - 5347455 - | putative outer membrane protein TERM 6043 5348848 - 5348837 - R 78 -5.8 -4.8622 | CCTTGCAAGCAAAAA TGCC CTGG GGCA TCAACGGCACTATAA HRM2_47440 5352185 - 5348934 - | Cation or drug efflux system protein TERM 6044 5349159 - 5349136 - G 70 -10.2 -2.9155 | overlap 5349131 GCCGTCAACATCATA GGCCGGAACC GCAC GGCTCCGGCA TCGATCACTGCCTTG TERM 6045 5350091 - 5350079 - G 73 -10.5 -3.21924 | overlap 5350077 CCAGGGTGGATAACA CCGGG GGT CCCGG GGGTACCTCTGCAAT HRM2_47450 5353354 - 5352182 - | secretion protein, HlyD family TERM 6046 5353976 - 5353939 - g 76 -4.7 -5.03314 | gap 1, overlap 5353949 5353951 5353952 GTCACCCCTAAAAAA CGACGC-AAAACACGACC CAC GGCCGGGTCTAAGCGACG CCGCCTGGAAGGCAA TERM 6047 5353965 - 5353949 - g 71 -5.7 -4.28589 | overlap 5353939 5353951 5353952 AAAAACGACGCAAAA CACGACC CAC GGCCGGG TCTAAGCGACGCCGC TERM 6048 5354041 - 5354017 - g 74 -4.1 -5.0538 | opp_overlap 5354031, overlap 5354018 5354019 5354021 GCCCAGCTTAAAAAA CTCAGGGGCAA AAT TCGCACCCGTG ATTTATAGACTGCCT HRM2_47460 5353627 - 5354049 + | hypothetical protein perM 5355111 - 5354044 - | PerM TERM 6049 5355137 - 5355156 + r 72 -6.3 -4.40561 | overlap 5355134 TTTCTAATAGGTGAA GGCGGAG AAGGCC CCCCGCC TTGTTTTTCAGGAGA acd15 5356889 - 5355183 - | Acd15 TERM 6050 5355519 - 5355542 + g 70 -11 -2.59556 | overlap 5355518 AAGGGCCATGCCTGA GCCGATGAGG AACT CCTCATAGGC CTTGATCTGATCTTT TERM 6051 5358096 - 5358069 - g 71 -7.8 -3.9712 | gap 1 GTAGCCGATTACAAA GGTCTTCAAATGC GAT GCATT-GAAGCCC CTGTCCGAATCGCCA TERM 6052 5358131 - 5358119 - g 89 -10.5 -4.31835 | AATCGCCACAACAAA GGCGC TGG GCGCC AATCCCATCCCCATC dctP11 5357562 - 5358569 + | DctP11 TERM 6053 5358631 - 5358599 - f 88 -12.7 -2.73483 | opp_overlap 5358600 AGTCTATTTTAATCA TTGCCGGGTTGGCAT TGT ACGTCAACCCGGCAC ACGGAAAAAGATAAC dctQ11 5358788 - 5359267 + | DctQ11 dctM11 5359269 - 5360552 + | DctM11 TERM 6054 5361001 - 5360986 - g 83 -3.2 -5.48213 | overlap 5360987 CATTGAAAATAAAAA GGTGAC CGAT GTCACA ATCAGAAATGTGCCG prdF2 5360567 - 5361580 + | PrdF2 HRM2_47530 5362091 - 5361669 - | hypothetical protein TERM 6055 5361796 - 5361758 - G 100 -16.1 -4.07687 | opp_overlap 5361739 5361770 5361784, overlap 5361760 5361770 ATGTGGGGGTTAAAA CAGCCCACAAAACCGGC TTCAT GCCGGTTTTACGGGCCA TGTCCATGAGCCGGT TERM 6056 5361794 - 5361760 - G 100 -18.7 -3.63744 | opp_overlap 5361739 5361770 5361784, overlap 5361758 5361770 GTGGGGGTTAAAACA GCCCACAAAACCGGC TTCAT GCCGGTTTTACGGGC CATGTCCATGAGCCG TERM 6057 5361770 - 5361784 + g 74 -8.5 -4.08394 | opp_overlap 5361770 5361760 5361758, overlap 5361739 AAACAGCCCACAAAA CCGGC TTCAT GCCGG TTTTACGGGCCATGT TERM 6058 5361784 - 5361770 - G 79 -8.5 -4.43221 | opp_overlap 5361739 5361770, overlap 5361760 5361758 AAACAGCCCACAAAA CCGGC TTCAT GCCGG TTTTACGGGCCATGT TERM 6059 5362479 - 5362458 - H 70 -5.8 -4.27316 | overlap 5362459 GTTCGTAATCCAAAA TGCCGGAA GGATTA TTCCGGCC CAAAAAAAATTGTTA TERM 6060 5362478 - 5362459 - H 72 -9.3 -3.16068 | overlap 5362458 TTCGTAATCCAAAAT GCCGGAA GGATTA TTCCGGC CCAAAAAAAATTGTT TERM 6061 5362511 - 5362562 + H 100 -9.6 -4.58466 | gap 1, opp_overlap 5362511 5362507 5362512 ATCAGACTCAATGAA GCCTGGAAGGCTTCCTTAGGATA AGAAATA TATCC-ATGGAAGGCTTTCGGGC TTTTGTCGTTCTGGG TERM 6062 5363007 - 5362997 - g 74 -2.4 -5.08824 | TGGTCATTCAAAAAA CCGG TGG CTGG TGGGGTGACCATTAT HRM2_47540 5362636 - 5364759 + | outer membrane receptor protein TERM 6063 5365345 - 5365330 - g 77 -11.8 -3.16191 | TCAGATCCCGATCAA GGGGGG TCTG CCCCCC TGGACAGACCGGATC HRM2_47550 5364922 - 5365842 + | hypothetical protein HRM2_47560 5365922 - 5366170 + | hypothetical protein lplA 5366508 - 5367488 + | LplA TERM 6064 5367601 - 5367587 - f 71 -4.9 -4.68545 | opp_overlap 5367597 ATTTAACAGATAAAA CCAGG GTTCG CCCGG CACGGGTTTTGCTAT TERM 6065 5367597 - 5367607 + F 87 -8.2 -4.41353 | opp_overlap 5367587 TAAAACCAGGGTTCG CCCG GCA CGGG TTTTGCTATATCTGA HRM2_47580 5367707 - 5368033 + | putative DNA-binding protein TERM 6066 5368046 - 5368034 - T 77 -10.5 -3.14344 | overlap 5368021 GACCTGTTCGACTAA CCGGC AGG GCCGG AGCATGGCATGGGTT TERM 6067 5368124 - 5368104 - T 100 -6.9 -5.77853 | overlap 5368108 AACCTTTAAAAAAAA CAAAGGG AGACCAG CCCTTTG GTATGAAGGGCTGTC TERM 6068 5368143 - 5368108 - T 100 -12 -5.33985 | gap 1, overlap 5368104 TTTAAAAAAAACAAA GGGAGACCAGCCCTT TGGTATG AAGGGCTG-TCCCCC TGCCACTTCCTGAAA HRM2_47590 5368478 - 5368167 - | hypothetical protein HRM2_47600 5369615 - 5368566 - | acetoin catabolism protein TERM 6069 5368669 - 5368679 + g 74 -2.4 -5.15969 | opp_overlap 5368662 GAAAGCCACACCGTC AGGG TGT CCCC TTTTTTGACTTCCAC TERM 6070 5369625 - 5369594 - G 70 -8.6 -3.65722 | AAAAGAATCTGGAAA CAGGGGCCTGCAAA CAGG TCATCAGGCCCCCG CAAGTTGAAAAACTA pdhB 5370612 - 5369638 - | PdhB pdhA 5371611 - 5370652 - | PdhA HRM2_47630 5372028 - 5371624 - | hypothetical protein pdhC 5373509 - 5372076 - | PdhC TERM 6071 5373517 - 5373563 + H 81 -10.9 -3.40403 | opp_overlap 5373528, overlap 5373528 5373552 TGGCCCATCTACCGC GTTGCACCAGAGGCCCAATAG GCCTG CTATTGCGCCTTTGGTTCGCC TTGTAATGAGCCAAA TERM 6072 5373528 - 5373552 + H 77 -8.6 -3.9377 | opp_overlap 5373528, overlap 5373517 CCGCGTTGCACCAGA GGCCCAATAG GCCTG CTATTGCGCC TTTGGTTCGCCTTGT TERM 6073 5375403 - 5375381 - g 78 -5.7 -4.77036 | TGCCACCAGCAAAAA TTTAAAGGA ACTCA TCCTTCAAA AAACATTCCGTGAGG HRM2_47650 5373819 - 5375873 + | Signal-transduction and transcriptional-control protein HRM2_47660 5376333 - 5375950 - | hypothetical protein TERM 6074 5376442 - 5376475 + H 100 -16.8 -2.71144 | gap 1 AGTCTACCACGGATA TGTCCCGGGTCCCCT TGGAC AGGGGGCCCGGG-CA TGATTGGCAGAGCTG TERM 6075 5377189 - 5377170 - g 80 -10.6 -3.71848 | CCTCTTGATCAACAA CGCTGCCG TGGA CGGCTGCG GAACGAAAAATTCTT TERM 6076 5377249 - 5377238 - g 83 -3 -5.51165 | opp_overlap 5377238 AAAATTTCAAAAAAA CAAT CGAC ATTG ATTTATCAGCGGCAG HRM2_47670 5376889 - 5377674 + | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) HRM2_47680 5377688 - 5378362 + | hypothetical protein HRM2_47690 5378471 - 5379124 + | hypothetical protein TERM 6077 5379950 - 5379936 - g 70 -4.2 -4.68593 | opp_overlap 5379936 GGTATTACCCAAAAA GGGGTA GGA TACACC TGTATCGGATCTGCG TERM 6078 5380041 - 5380018 - g 73 -5.3 -4.61199 | ATCCGAGATATAAAA TGAACTGCA ACACCA TGCAGCCCA CAGGAGGTTACAATC HRM2_47700 5379162 - 5380733 + | Xylulose kinase (Xylulokinase) TERM 6079 5380746 - 5380788 + T 100 -14.4 -3.60296 | gap 2, overlap 5380747 TGACATCACCCCTGA TGGGAAGCGTTTCGGATTCC GTTGG GGAATCCG-A-CGCTTCCCG TTTACCATCCACGTC TERM 6080 5380747 - 5380787 + T 100 -15.7 -2.75963 | gap 2, overlap 5380746 GACATCACCCCTGAT GGGAAGCGTTTCGGATTCC GTTGG GGAATCCG-A-CGCTTCCC GTTTACCATCCACGT TERM 6081 5381040 - 5381051 + T 75 -2.2 -5.3658 | CTGTTCCCGTTCACC TCTG TTAT CGGA TTTTATTTTTGTCGT nudC 5381984 - 5381181 - | NudC serA2 5382967 - 5382020 - | SerA2 TERM 6082 5382532 - 5382508 - G 73 -10.7 -3.30159 | TCAACCTTTGTACAA GGGCCTGGC CAATGCC GCCAAGCCC GATGATGCCCACGGT HRM2_47730 5383485 - 5382964 - | hypothetical protein TERM 6083 5383370 - 5383383 + g 86 -6.7 -5.05782 | GTTGCAAGCTTTTGG GCAAG GGAC CTTGC TTTTTTAAGATCCCT HRM2_47740 5384489 - 5383488 - | putative heme biosynthesis protein purF 5385910 - 5384498 - | PurF carB2 5389136 - 5385912 - | CarB2 carA 5390275 - 5389136 - | CarA HRM2_47780 5392641 - 5390308 - | putative pyridine nucleotide-disulfide oxidoreductase TERM 6084 5391141 - 5391114 - G 72 -8.4 -3.85817 | opp_overlap 5391127 ATTCGTTGGCAGAAA CGGCCCGTTC AATGCCGG GAACGGGCAG CATCCTCGGCTTTTT TERM 6085 5391682 - 5391700 + g 71 -6.6 -4.14792 | overlap 5391680 AATCCCCGTGGGGCA GGCCGTCT GAC AGGGGGCC TTGTATTTTTGATTT TERM 6086 5392582 - 5392602 + g 91 -7.5 -5.09225 | CTCTTCAAGTATTCT GGAGGAGAG GCG CTCGCCTTC TTTTTTACCTGCAAT HRM2_47790 5394289 - 5392655 - | Glutamate synthase TERM 6087 5393005 - 5393018 + gr 86 -8.1 -4.59773 | overlap 5392993 5392995 GAGCTGCTGCATTGG CGGCA ATGT TGCCG TTTTTCCCGATGCCG HRM2_47800 5395383 - 5394253 - | hypothetical protein TERM 6088 5397674 - 5397661 - g 87 -9.5 -4.3586 | opp_overlap 5397660, overlap 5397662 GTATGGACAGGAAAA GGGGG GAGT CCCCC GGGTTTGCCGCCATT TERM 6089 5397674 - 5397662 - g 73 -10.5 -3.21034 | opp_overlap 5397660, overlap 5397661 TATGGACAGGAAAAG GGGGG AGT CCCCC GGGTTTGCCGCCATT glnE 5395581 - 5398460 + | GlnE TERM 6090 5399894 - 5399908 + G 71 -6.4 -4.36914 | AGTGTTCAGAACCAT TGACGG CCT CCGTTA TTTTCTCACCGGCGA fadD7 5398548 - 5400284 + | FadD7 TERM 6091 5400280 - 5400299 + F 85 -9.2 -4.21343 | opp_overlap 5400270 5400279 5400278 ATGAAGAGATCAAGG CCTGACCC CACC GGGACAGG TTTGTATATATTGAA TERM 6092 5400352 - 5400319 - f 100 -19.8 -5.14477 | opp_overlap 5400319 TATATATTGAAAAAA GCCCGTCAGCAATA CAGGTT TATTGCTGACGGGC TTTGAAACGACTTTA TERM 6093 5400319 - 5400352 + F 100 -19.8 -3.54935 | opp_overlap 5400319 TATATATTGAAAAAA GCCCGTCAGCAATA CAGGTT TATTGCTGACGGGC TTTGAAACGACTTTA TERM 6094 5400623 - 5400584 - g 71 -7.2 -4.07568 | gap 1, opp_overlap 5400596, overlap 5400596 CTTCCTCGTTGAAAA GGGCATTAAAAAGGGGGAC AAG GTTGCCCTTTTTC-TGCCC AACATCCCCCAGTTT TERM 6095 5400596 - 5400612 + G 74 -4.3 -4.82901 | opp_overlap 5400596 5400584 AAAGGGCATTAAAAA GGGGGAC AAG GTTGCCC TTTTTCTGCCCAACA TERM 6096 5401148 - 5401127 - g 72 -3.7 -4.86293 | gap 1 CAAGAAAAATGAAAA GCC-TGACAA AAT TCGCCACGGC GGCTATCACACCTTC TERM 6097 5402059 - 5402029 - g 70 -3.2 -4.88388 | overlap 5402031 5402038 AGAAGCCCAGAAAAA TCGAATTCAGGGAC GAT ATCCCGGTATCCAA CGTGGGCAAGGTATT fadD8 5400378 - 5402111 + | FadD8 TERM 6098 5402218 - 5402179 - T 83 -11.6 -2.91467 | opp_overlap 5402208, overlap 5402181 5402205 5402207 5402208 AAATTTGCAATCATA GAGGTCAACCCATG GAAAAAAGCAAA CATGGGTTGACCCC ATTCAACCCTTTTAC TERM 6099 5402216 - 5402181 - T 76 -10.6 -3.00476 | opp_overlap 5402208, overlap 5402179 5402205 5402207 5402208 ATTTGCAATCATAGA GGTCAACCCATG GAAAAAAGCAAA CATGGGTTGACC CCATTCAACCCTTTT TERM 6100 5402208 - 5402227 + T 76 -7.9 -4.07885 | opp_overlap 5402181 5402179 5402207 5402205 5402208 GAAAAAAGCAAACAT GGGTTGA CCCCAT TCAACCC TTTTACCCAGGAATC HRM2_47840 5403085 - 5402327 - | putative enoyl-CoA hydratase TERM 6101 5402912 - 5402930 + g 80 -4.5 -5.09245 | opp_overlap 5402912, overlap 5402914 TTTGGCTGCACCAAA GATCAGG AGGAC CCTGACC TTTTTATCCTTTTCA HRM2_47850 5403872 - 5403312 - | hypothetical protein prfB 5404869 - 5403880 - | PrfB HRM2_47870 5406565 - 5405006 - | apolipoprotein N-acyltransferase TERM 6102 5405660 - 5405645 - G 83 -9 -4.30987 | ACTGCCCACAAGAAA CCAGGT TTTT ACCTGG CGAATGCATTGATCC TERM 6103 5405728 - 5405749 + g 70 -2.9 -4.7629 | gap 1, opp_overlap 5405720 5405719 5405715 AAGGAAGGGCCGTTT CCGG-CCATA CGA TGAGGTCCGG TTTTTCCGTTGCTGC TERM 6104 5406408 - 5406395 - G 71 -5.2 -4.53705 | AAGCCCCAGATAAAA CCCC TGTTTC GGGG CCATGCCCTGGACAG HRM2_47880 5406852 - 5406562 - | hypothetical protein TERM 6105 5406818 - 5406830 + g 89 -10.5 -4.36914 | overlap 5406792 GGCAGATACCCTGCT CCGGC TAT GCCGG TTTTATAAGAAACGC TERM 6106 5407095 - 5407132 + r 71 -9.7 -2.6296 | overlap 5407121 AGGCGTTTCAAAATT CGTTGAGGCCGGAGCCA TACC TCGCTCCGGCCATGCCG GTTACTTGGGGTTTG TERM 6107 5407121 - 5407133 + r 78 -10.5 -3.3907 | overlap 5407095 GAGCCATACCTCGCT CCGGC CAT GCCGG TTACTTGGGGTTTGA HRM2_47890 5413718 - 5407134 - | hypothetical protein TERM 6108 5407705 - 5407726 + g 70 -10.1 -3.29263 | overlap 5407722 GTTTTCAATTTCTGT GTGCCGGCA CTGG TGCCGTCAC TTATCCAGAGACTGT TERM 6109 5412783 - 5412773 - G 70 -8.2 -3.78934 | opp_overlap 5412773 5412772 5412777 GGCTTGCTACAATAA CGGC GAT GCCG GTTTCAGGAAAAGAA TERM 6110 5414741 - 5414757 + G 71 -5.1 -4.56597 | overlap 5414743 TCCAGGTGAGATTGT GATCAAG ACC CTTGAGC TTTTTGCCAGCAGCA TERM 6111 5415034 - 5415047 + G 74 -3.8 -5.00616 | opp_overlap 5415034, overlap 5415024 CCGAAGTTCAAGAAC GGGT GTTTGA ACCC TTTTTTACGACAAAA HRM2_47900 5413995 - 5415206 + | sensory box histidine kinase family protein HRM2_47910 5415278 - 5416726 + | hypothetical protein HRM2_47920 5417707 - 5416856 - | putative esterase/lipase TERM 6112 5417378 - 5417364 - G 79 -5.6 -5.06103 | overlap 5417353 ATAAGCGGTAAAAAA CCACCG CCA CTGTGG GCAACCCAAATGCAC HRM2_47940 5419499 - 5417904 - | putative transport protein HRM2_47930 5417740 - 5417991 + | hypothetical protein HRM2_47960 5420096 - 5419734 - | hypothetical protein HRM2_47950 5419600 - 5419827 + | hypothetical protein TERM 6113 5419831 - 5419806 - Gf 100 -10.5 -5.33848 | opp_overlap 5419806 ACCAGAATCAAAAAA GGGTCTACGAA AAAT TCCGTAAACCC TTAATTTTTTATGGT HRM2_47970 5420197 - 5420748 + | hypothetical protein TERM 6114 5420796 - 5420754 - f 95 -3.4 -6.08342 | gap 1, opp_overlap 5420757, overlap 5420756 5420757 GAAGAAATAAAAAAA GAGTTGCCCCCCAAGAGAA TTGGCG TTCTCC-GGGGGGCGATTG TCAGCACGACAAACC TERM 6115 5420794 - 5420756 - f 75 -6 -4.6372 | gap 1, opp_overlap 5420757, overlap 5420754 5420757 AGAAATAAAAAAAGA GTTGCCCCCCAAGAGAA TTGGCG TTCTCC-GGGGGGCGAT TGTCAGCACGACAAA TERM 6116 5420757 - 5420793 + F 78 -10.2 -3.28712 | gap 1, opp_overlap 5420756 5420754 5420757 GAAATAAAAAAAGAG TTGCCCCCCAAGAGAAT TGGC GTTCTCC-GGGGGGCGA TTGTCAGCACGACAA TERM 6117 5420793 - 5420757 - f 74 -9.5 -3.34572 | gap 1, opp_overlap 5420757, overlap 5420756 5420754 GAAATAAAAAAAGAG TTGCCCCCCAAGAGAA TTGGCG TTCTCC-GGGGGGCGA TTGTCAGCACGACAA HRM2_47980 5420871 - 5421179 + | hypothetical protein HRM2_47990 5421190 - 5421435 + | hypothetical protein HRM2_48000 5421444 - 5423126 + | replicative DNA helicase TERM 6118 5423348 - 5423296 - f 91 -7.2 -5.252 | gap 1, overlap 5423300 5423328 GACGGTTATAAAAAA CCACTTGTAATCGTCAAAGCCCCTA TTGA CAACGGTCTTGACGATTACAA-CGG CCACGATTATAAATG TERM 6119 5423345 - 5423300 - f 71 -9.9 -2.66157 | overlap 5423296 5423328 GTTATAAAAAACCAC TTGTAATCGTCAAAGCCCCTA TTGA CAACGGTCTTGACGATTACAA CGGCCACGATTATAA TERM 6120 5423965 - 5423983 + F 86 -10.3 -3.83437 | opp_overlap 5423962, overlap 5423963 ATCGTTAATTTATAT CTGCCCA CCGAA TGGGCAG TCTTTTGATTAGTAA HRM2_48010 5424194 - 5424517 + | hypothetical protein HRM2_48020 5424793 - 5426133 + | Phage major capsid protein, HK97 family TERM 6121 5426275 - 5426233 - f 71 -9.9 -2.71712 | opp_overlap 5426233, overlap 5426240 TTTCTGTTTGTAAAG TTGGAAAGGCCCCACTCCT GGTCG AGATACGGGGCCTTTCTAA TTTCTTACCCCTGGA TERM 6122 5426615 - 5426644 + F 73 -2.7 -5.11063 | overlap 5426616 5426618 5426620 CATTACAGGTGGTTG CGGTGGGTGGGAC ATTT GTCCCACCTGTAA TTTTTCTTGCATGAT TERM 6123 5426618 - 5426641 + F 81 -11 -3.39664 | overlap 5426616 5426615 5426620 TACAGGTGGTTGCGG TGGGTGGGAC ATTT GTCCCACCTG TAATTTTTCTTGCAT TERM 6124 5426620 - 5426639 + F 100 -13.6 -3.25358 | overlap 5426618 5426616 5426615 CAGGTGGTTGCGGTG GGTGGGAC ATTT GTCCCACC TGTAATTTTTCTTGC HRM2_48050 5426767 - 5427168 + | hypothetical protein TERM 6125 5427206 - 5427171 - f 100 -9.6 -4.84262 | overlap 5427173 GAAGAACCAATAAAA CAGCCCCACCAGGTGA CTCA CCACCCGGCAGGGCCT AACCACAAAACATCT TERM 6126 5427204 - 5427173 - f 100 -14.4 -4.01597 | overlap 5427171 AGAACCAATAAAACA GCCCCACCAGGTGA CTCA CCACCCGGCAGGGC CTAACCACAAAACAT TERM 6127 5427336 - 5427305 - f 78 -4.4 -5.09895 | gap 1, opp_overlap 5427306 CACCGATTGAAAAAA CTCCACCGTGGGATA ATT TTTCCCACCA-GGAG CTTAAGGAGATCCGG HRM2_48060 5427431 - 5427661 + | hypothetical protein TERM 6128 5427682 - 5427705 + F 100 -8.1 -5.61596 | opp_overlap 5427675 5427682 TGAGATCACCGGAAA CCAGCTCCT TTATCC GGGGGCTGG TTTTTTTGTCGGGGT TERM 6129 5428124 - 5428093 - g 73 -5.9 -4.58283 | gap 1, overlap 5428097 CAACGGGTGGAAAAA TTTATCACCGACCG ACAGG CGGCCGG-GATGAA CCTATCGACCCTGAG TERM 6130 5428200 - 5428187 - g 80 -9.5 -4.07687 | ACCTTGCGGTGAAAA GGGGC TATT GCCCC AGGAACCCCCTGGAC HRM2_48070 5427763 - 5428845 + | Phage integrase family protein TERM 6131 5428871 - 5428906 + T 82 -7.6 -4.46212 | opp_overlap 5428875, overlap 5428875 ATGGTAGCAAAATCA AAAAGGGTTTACAGCC GTTT GACTGTAAACCCTTGA TTTTATGGTAGGCAC TERM 6132 5428902 - 5428875 - T 100 -15 -5.1166 | opp_overlap 5428871 5428875 TAGCAAAATCAAAAA GGGTTTACAGCC GTTT GACTGTAAACCC TTGATTTTATGGTAG TERM 6133 5428875 - 5428902 + T 100 -12.8 -3.77302 | opp_overlap 5428875, overlap 5428871 TAGCAAAATCAAAAA GGGTTTACAGCC GTTT GACTGTAAACCC TTGATTTTATGGTAG HRM2_48090 5430291 - 5429047 - | hypothetical protein TERM 6134 5429733 - 5429743 + g 100 -6.8 -5.41143 | opp_overlap 5429733 5429742 GCCCTTTTCCCACAA GGGT GAA ACCC TTTTTTTCAAGGATA TERM 6135 5430169 - 5430189 + g 89 -2.5 -5.79595 | overlap 5430170 5430173 GTCGTTAACGATTGT CTGTTTTCC AAG GGAAATCAA TTTTTTCTTTTCCGG ispB 5431284 - 5430301 - | IspB TERM 6136 5431134 - 5431123 - G 74 -2.2 -5.13741 | TGAACTCAATAAAAA CAAC AGGG GTCG AAGCCTTTTTCCGCC HRM2_48110 5432606 - 5431281 - | 2-methylthioadenine synthetase TERM 6137 5431709 - 5431724 + g 70 -8.2 -3.65542 | overlap 5431707 TAAGAGTGGTCCTGA GCGCTG CATC CGGCGC TGTTTTGCGGATAAA TERM 6138 5432455 - 5432438 - G 74 -11.3 -3.17212 | opp_overlap 5432420 CCAGGATCGTATCAA CAGCCTC TGCC GAGGCTG CTGATATGAACCCGC htpG 5434528 - 5432603 - | HtpG TERM 6139 5435136 - 5435121 - g 70 -4.6 -4.67607 | CCTTGAACAAATAAA CCAGCG ACTG CCCTGG ATTGAACGTATCGGG HRM2_48130 5434855 - 5435724 + | putative oxygen-independent coproporphyrinogen III oxidase TERM 6140 5435753 - 5435729 - f 83 -11.5 -2.93089 | overlap 5435726 GAGCATTGTAAATCA GGGGACAGA GTCGACA TCTGTCCCC ATTAAAACAGAATAA TERM 6141 5435944 - 5435956 + G 71 -6.3 -4.36914 | overlap 5435936 CGCCCGCGGCCTTTG TCCTT TGG AAGGA TTTTCTAAAACACAA tkt1 5435814 - 5437817 + | Tkt1 TERM 6142 5437865 - 5437819 - T 86 -8.9 -4.39696 | opp_overlap 5437829, overlap 5437824 5437829 TTGTAAACGAATAAA CA-CAATATCAGCGCCAGAGCCC TGG GGGTTCTGGCGCT-ATATCCCTG ACACCCCTTTCCAAA TERM 6143 5437859 - 5437824 - T 100 -15.6 -3.99352 | gap 1, opp_overlap 5437829, overlap 5437819 5437829 AACGAATAAACACAA TATCAGCGCCAGAGCCC TGG GGGTTCTGGCGCT-ATA TCCCTGACACCCCTT TERM 6144 5437855 - 5437829 - T 100 -18 -2.88737 | opp_overlap 5437829, overlap 5437824 5437819 ATAAACACAATATCA GCGCCAGAGCCC TGG GGGTTCTGGCGC TATATCCCTGACACC TERM 6145 5437829 - 5437855 + T 100 -20.2 -2.91264 | opp_overlap 5437829 5437824 5437819 ATAAACACAATATCA GCGCCAGAGCCC TGG GGGTTCTGGCGC TATATCCCTGACACC HRM2_48150 5438723 - 5437905 - | putative hydrolase (HAD superfamily protein) TERM 6146 5438516 - 5438493 - G 78 -3.8 -5.11836 | overlap 5438513 5438514 ATAGGCAAAATAAAA GGCGCCGT TCTCTCCC ACAACGCC GTCCACCGGCCACAT TERM 6147 5438642 - 5438628 - G 76 -11.4 -3.21269 | opp_overlap 5438634, overlap 5438624 5438622 GGCAGCAAAGACACA GGCAGG TAT CCTGCC ATTGCAGGTCATGGT HRM2_48160 5438863 - 5440329 + | hypothetical protein HRM2_48170 5440562 - 5441536 + | DctP9 HRM2_48180 5441549 - 5442058 + | putative TRAP-type C4-dicarboxylate transport system, small permease component HRM2_48190 5442055 - 5443332 + | putative TRAP-type C4-dicarboxylate transport system, large permease component TERM 6148 5443729 - 5443708 - g 82 -6.5 -4.88918 | overlap 5443710 5443721 5443725 GGAGCTGAAACAAAA CGGCCTGAA TCAA CTCAGGCTG AGCTGCAGCCGATGG TERM 6149 5444132 - 5444113 - g 85 -3.6 -5.40072 | CCTGTTTGAAAAAAA TGAGCAAA ACCC TTTGTTCA ACCTCATCCGAACTG HRM2_48200 5443397 - 5444305 + | Predicted Fe-S oxidoreductase HRM2_48210 5445528 - 5444356 - | putative permease TERM 6150 5444524 - 5444502 - G 74 -6.9 -4.41494 | overlap 5444481 GACCGGCAAGCAAAA GAGCCAGGG CTGGC CCCTTGCCC ATGCCGGCCCCCAGT TERM 6151 5444884 - 5444896 + g 77 -10.5 -3.57144 | opp_overlap 5444884 5444881 CCACAAACCAATCGA GCCGG CCT CCGGC TTTGCGAATGCCGCA TERM 6152 5445857 - 5445845 - H 80 -10.5 -3.50869 | CAGCAGTCCATATAA CCGGC ACG GCCGG AGCAAGTTATCTGCT TERM 6153 5446172 - 5446160 - H 100 -10.5 -4.52589 | overlap 5446161 TTGTTTGATATAAAA CCGGC ACG GCCGG AGCGAGGTATCTGCT TERM 6154 5446199 - 5446161 - H 86 -11.7 -3.31232 | gap 1, overlap 5446160 TGTTTGATATAAAAC CGGCACGGCCGGAGC-GA GGTA TCTGCTCCGGCCACAACG AATGATGAAACGCCT TERM 6155 5446973 - 5446962 - g 70 -4.4 -4.59773 | opp_overlap 5446971, overlap 5446964 GGCTACTGCCAAAAA TACC TTCG GGTA CCGCAGGGCGGAAAT zitB 5446630 - 5447670 + | ZitB HRM2_48230 5447989 - 5448279 + | transcriptional regulator ArsR family HRM2_48240 5448399 - 5449415 + | putative permease TERM 6156 5449439 - 5449427 - f 89 -10.5 -3.97406 | TTAAAACGCTATAAA CCGGC ATG GCCGG AGCAAGTTATGGCTC HRM2_48250 5449541 - 5449777 + | hypothetical protein TERM 6157 5450163 - 5450150 - g 74 -2.3 -5.09762 | TGTTAAGAAAGAAAA CAAGG GAAG CCTAG AGGACAGGTTTGGTA HRM2_48260 5449788 - 5450579 + | hypothetical protein TERM 6158 5450962 - 5450944 - g 74 -4.6 -4.8048 | opp_overlap 5450926 5450925 TTTTTAGATGAAAAA TCCATTGT TGA ACAATTGA CAAAAATAGGTGTAG trxA3 5450605 - 5451009 + | TrxA3 TERM 6159 5451069 - 5451081 + G 71 -5.5 -4.52857 | overlap 5451060 GTGGGACAGCTTTTG CAGCT GTT GGCTG TTTTGTCTGGGGAAT HRM2_48280 5451011 - 5451715 + | hypothetical protein TERM 6160 5451811 - 5451776 - T 100 -10.4 -4.60041 | gap 1, opp_overlap 5451773 5451772, overlap 5451777 ATGTATGTTTAAAAA CGGCCGGCGGATCCC TTTTTTT GGG-TCTGCCGGCCA TAAGATTTATTCAGT TERM 6161 5451810 - 5451777 - T 86 -11.7 -3.35542 | gap 1, opp_overlap 5451773 5451772, overlap 5451776 TGTATGTTTAAAAAC GGCCGGCGGATCCC TTTTTTT GGG-TCTGCCGGCC ATAAGATTTATTCAG istB3 5452552 - 5451818 - | IstB3 TERM 6162 5452443 - 5452462 + g 71 -5 -4.57569 | opp_overlap 5452446, overlap 5452446 ATCAATTCTGATAAA AAATGGAC ATGG GTCCATTG TTTTTGAGCGGCTGC TERM 6163 5452446 - 5452459 + g 74 -6.7 -4.40561 | opp_overlap 5452446, overlap 5452443 AATTCTGATAAAAAA TGGAC ATGG GTCCA TTGTTTTTGAGCGGC TERM 6164 5452459 - 5452446 - G 100 -6.7 -5.25803 | opp_overlap 5452446 5452443 AATTCTGATAAAAAA TGGAC ATGG GTCCA TTGTTTTTGAGCGGC istA5 5454017 - 5452545 - | IstA5 HRM2_48310 5454394 - 5454014 - | hypothetical protein HRM2_48320 5454875 - 5454363 - | hypothetical protein TERM 6165 5455023 - 5455006 - R 90 -4.1 -5.62288 | GGAAGAAAATAAAAA GAAGAAG GGTA CATCTTC AAACCAGGAAGAATA TERM 6166 5455127 - 5455152 + r 91 -7.7 -4.82901 | opp_overlap 5455127 5455123 CCCTTGAAAAAGTAA TGTTCATAACG CTTA CCTTATGAACA TTTTTATGAACACAA TERM 6167 5455152 - 5455127 - R 72 -7.7 -3.80855 | opp_overlap 5455127, overlap 5455123 CCCTTGAAAAAGTAA TGTTCATAACG CTTA CCTTATGAACA TTTTTATGAACACAA TERM 6168 5455192 - 5455170 - R 73 -5.5 -4.70583 | TTTATGAACACAAAA CTACTGCTG GGAAT CAGCCGCAG GAATCCTTGCACCGG blc 5455739 - 5455170 - | Blc HRM2_48340 5456182 - 5455856 - | hypothetical protein HRM2_48350 5457061 - 5456318 - | hypothetical protein tolC 5458592 - 5457303 - | TolC TERM 6169 5457522 - 5457473 - G 73 -10.7 -3.1886 | gap 1, opp_overlap 5457473, overlap 5457464 ACCCAAGGTCAGTAA CCCGGAGGTTTTCCTGGGCCTCAA GGA TTCCGGCCCTGGAA-ACCTCAAGG TTATCAAAGGCCACA TERM 6170 5457945 - 5457921 - G 70 -8.7 -3.54424 | GGGCAGCTGGTCAAA CAGGGAAAA ATCAAGG TTTTCCCTG TCCATGGCAAGGCCT nolG 5461741 - 5458628 - | NolG TERM 6171 5458679 - 5458667 - G 78 -6.2 -4.75404 | overlap 5458669 AAACCCGATGAAAAA GGCC AGCAG GGCC GGAATTACAAACAGG TERM 6172 5460130 - 5460155 + g 72 -4 -4.82901 | gap 1, opp_overlap 5460130, overlap 5460133 GCGAGGTGAATACGA TGATGCAGACG AGACG CGTCAGCA-CA TTTTTCTGGAAAAAG TERM 6173 5461021 - 5460977 - G 82 -8.5 -4.59109 | opp_overlap 5461012 CACATCCCTTAAAAA GACCCGCTTGATGCCGTCGTC ATA GACCACCACATCCAGTGGATC CTGGTCATTCTGGAA TERM 6174 5461692 - 5461678 - G 73 -2.8 -4.97158 | overlap 5461679 TCACACCAAACAAAA CGATGA GAA TCACCA TGACCGCCGTTGTAA HRM2_48380 5462863 - 5461790 - | putative membrane-fusion protein TERM 6175 5463137 - 5463151 + r 77 -3.6 -5.24531 | GATTGAATGCCTAAT TTAAAC ATT GTTTGA TTTTTTGTCAAAACT TERM 6176 5463219 - 5463233 + r 83 -11.4 -2.98387 | opp_overlap 5463195 CTGGTTTTCACACCC GCCACC CCC GGTGGC TACTCTTTTCTGGAG HRM2_48390 5463955 - 5463233 - | putative acetyltransferase TERM 6177 5463986 - 5464021 + r 76 -9.6 -3.46602 | TGAACCTGAAACCGT CCCAGGCATCGTGGCT GAAA AGCCGGGATGCAGGGG TTATGGTGTAAAGGG HRM2_48400 5465003 - 5463963 - | hypothetical protein TERM 6178 5464185 - 5464169 - G 76 -2.9 -5.18357 | overlap 5464170 GAATCCAGGAAAAAA CCAGCCT GGC AAGCCGA AAATTGCCCATGGCA TERM 6179 5465111 - 5465128 + H 81 -7.1 -4.65305 | TTACGGCCGCCCACT CATGAAT TATA ATTCATG TTGTTTATTTTTTTC TERM 6180 5465309 - 5465296 - H 70 -3.9 -4.8622 | opp_overlap 5465296 TCTGTTAATCAAAAA TGAAT GCTC ATTCA TAAGTTGGTTGCATG TERM 6181 5465399 - 5465418 + G 77 -12.8 -2.72661 | opp_overlap 5465399 5465398 CGGGTCAGGAATAAT GGGTGGCG GAAT CGCCGCCC TCCTTGCCGGTGCTG TERM 6182 5466041 - 5466081 + G 86 -8.9 -4.56597 | CGTTCCCGAAGTGGA TGCCATTTTTGGTCCGGCC CTT GGCCGACCCAAGACTGCCA TTTTTAAGACAACAG TERM 6183 5466379 - 5466369 - g 91 -5.4 -5.4833 | overlap 5466370 GCAGCCAAGAAAAAA GCAA CCC TTGC CGAAAAGATTGTCTG TERM 6184 5467647 - 5467634 - g 76 -3.1 -5.08601 | TGATGTCAACAAAAA CACCA TGGT TGATG AGGAAGCAATCCTCA fadB 5465352 - 5467760 + | FadB TERM 6185 5468068 - 5468085 + G 82 -11.3 -3.6608 | overlap 5468060 GTCTTGAGGGCATTG CCCTTGC ATCT GCAAGGG TTTCCATGGGCTGGT fadA 5467773 - 5468951 + | FadA TERM 6186 5469012 - 5468985 - f 100 -15.6 -4.15577 | opp_overlap 5468985 TTAACAATTAAACAA GAGGCTGTTCCC GCAA GGGAGCAGCCTC TTTTTGCTTGACGAT TERM 6187 5468985 - 5469012 + F 100 -17.8 -4.86621 | opp_overlap 5468985 TTAACAATTAAACAA GAGGCTGTTCCC GCAA GGGAGCAGCCTC TTTTTGCTTGACGAT HRM2_48430 5469091 - 5469753 + | putative nuclease fdhC 5470547 - 5469756 - | FdhC TERM 6188 5470367 - 5470354 - G 76 -3.1 -5.07652 | gap 1, overlap 5470355 5470356 GCCCCGAAAATAAAA CTCTGG AGC CCAG-G ATTCGCAGCCTTGAT HRM2_48450 5470745 - 5471662 + | putative regulatory protein TERM 6189 5472352 - 5472340 - g 75 -9.1 -3.96148 | opp_overlap 5472330 TTTTTCCAGTACAAA CCGGT TTC ACCGG AAAGATGCCAGGCCT HRM2_48460 5471762 - 5472976 + | putative methyltransferase HRM2_48470 5473182 - 5473643 + | small heat shock protein TERM 6190 5473689 - 5473655 - f 100 -17.2 -3.58343 | CTGATCAGCTGTAAA TTCCGGTGGCAGGG CCTGGCT CCCAGCCACCGGAA CAAAAGACCTTAATC hgdB2 5473900 - 5475177 + | HgdB2 HRM2_48490 5476720 - 5475221 - | outer membrane protein HRM2_48500 5477918 - 5476794 - | ABC-type transport system, permease component TERM 6191 5477448 - 5477438 - G 70 -8.2 -3.78934 | TGGTGCGGACAACAA GCCC GAT GGGC AGTAGGGATTCGCCA HRM2_48510 5480665 - 5477921 - | ABC-type transport system, ATP-binding protein TERM 6192 5478420 - 5478430 + g 79 -6.8 -4.74103 | TAAAGGTTGGTTATG GAGC CCA GCTC TTTTTCCCTTACCAC TERM 6193 5478501 - 5478485 - G 71 -7.2 -3.9901 | AATGAAAATCAACAA CAGCGG AATTA CCGCCG GCACCATGGCGTAAA TERM 6194 5478839 - 5478825 - G 73 -5.6 -4.63218 | opp_overlap 5478824 5478825 5478833, overlap 5478827 GGGCGCTCAACAAAA TACCGG GAG CCGGAA ATGTTCTGGATATAA TERM 6195 5478837 - 5478827 - G 72 -8.2 -3.93367 | opp_overlap 5478825 5478824 5478833, overlap 5478825 GCGCTCAACAAAATA CCGG GAG CCGG AAATGTTCTGGATAT TERM 6196 5479331 - 5479321 - G 71 -5.4 -4.43911 | AAAGTTCAATCAAAA GTTC CCA GAAC TGATCCCGGGCCACG TERM 6197 5480557 - 5480502 - G 74 -8.2 -4.06055 | gap 1, overlap 5480506 ACCCCGGAAATCAAA GCCAGCA-GGCTGGACTTACCCACCCC GTC GGGACCGATCAGTCCAGCCATGCAACC TGCAGGAATGTTAAG TERM 6198 5480553 - 5480506 - G 82 -14.2 -2.73676 | gap 1, overlap 5480502 CGGAAATCAAAGCCA GCA-GGCTGGACTTACCCACCCC GTC GGGACCGATCAGTCCAGCCATGC AACCTGCAGGAATGT HRM2_48520 5481666 - 5480662 - | putative secretion protein HRM2_48530 5481767 - 5482012 + | hypothetical protein HRM2_48540 5482042 - 5482635 + | hypothetical protein HRM2_48550 5482660 - 5483199 + | hypothetical protein HRM2_48560 5483327 - 5484046 + | hypothetical protein TERM 6199 5484076 - 5484065 - f 78 -5.8 -4.89054 | GTTACAAAAAAACAA TCCC CAAA GGGA GGCCGAATGAACAAG TERM 6200 5484512 - 5484522 + G 91 -5.4 -5.41143 | ACCTATGTCGAAGAG TACC TCA GGTA TTTTTTTACACAATA TERM 6201 5484832 - 5484864 + G 80 -4.3 -5.07486 | gap 2, opp_overlap 5484795, overlap 5484820 5484835 ACTTCAATCCTTGTT TGACTTTCCCGACCA GATCG TGGT-GGGAAGG-CA TTTTTCTTCCGCCTG HRM2_48570 5484083 - 5485108 + | putative ADP-ribosylglycohydrolase TERM 6202 5485172 - 5485153 - f 75 -2.1 -5.40072 | CGCCGTTGAAAAAAA TGGTATG AAACAA CATGCCA AAGAAAAACCGTGGA TERM 6203 5485525 - 5485541 + G 80 -2.2 -5.42259 | opp_overlap 5485525 TGCAAAGGAAGTGAA CGAAGA CAGGT TCCTCG TTTTTTTCGAACTCG HRM2_48580 5485217 - 5485600 + | hypothetical protein TERM 6204 5485644 - 5485625 - f 84 -3.6 -5.42862 | opp_overlap 5485635, overlap 5485627 5485635 AGACGGTGAAAAAAA TGGAAAAG GATC CTTTTTCA ACGGATGATCTCGGT TERM 6205 5486132 - 5486113 - g 83 -5.6 -5.08824 | opp_overlap 5486116 5486125, overlap 5486114 TTTGCAGGTAAAAAA GCAGGCGA TCAT CCGCCTGT TGACGGTTTAATCCG TERM 6206 5486131 - 5486114 - g 70 -9.1 -3.64812 | opp_overlap 5486116 5486125, overlap 5486113 TTGCAGGTAAAAAAG CAGGCGA TCAT CCGCCTG TTGACGGTTTAATCC HRM2_48590 5485759 - 5486163 + | hypothetical protein uvdE 5487056 - 5486160 - | UvdE TERM 6207 5486259 - 5486246 - Gf 70 -8.1 -3.68506 | TAATATCCATTGAAA GCCAC AGGG GTGGC AGGTCATTGATGTCA TERM 6208 5487667 - 5487654 - gR 70 -8.1 -3.60657 | overlap 5487626 5487625 GAGAAAAAAACTGAA TCCCG ACCA CGGGA CCGCCCGGCACAACA HRM2_48620 5490594 - 5488633 - | cation-efflux family protein HRM2_48610 5487031 - 5488698 + | CdfA TERM 6209 5489846 - 5489877 + gT 78 -2.2 -5.24129 | gap 1, overlap 5489849 GCTAATGTCATGGGG CTGCCG-GGTACGGG TTT CTCGTAAAATGGCAG TTTTTTGTGGAAAAA TERM 6210 5489993 - 5490020 + gT 100 -3.3 -6.17184 | overlap 5489994 CAGGTCAAAGGTATG GCATGGGCGCG CAATAT CGCCTCCATGA TTTTTTTTTCCTGCT TERM 6211 5489994 - 5490019 + gT 74 -6.8 -4.2787 | overlap 5489993 AGGTCAAAGGTATGG CATGGGCGCG CAATAT CGCCTCCATG ATTTTTTTTTCCTGC TERM 6212 5490355 - 5490377 + gT 80 -3.3 -5.26316 | overlap 5490356 GGGTTCGTGGATGTT GTGCTCGTC CAGCA GGCGGGCAA TTTTTTGTCCCATGG HRM2_48630 5491871 - 5490591 - | predicted NAD/FAD-binding protein TERM 6213 5491694 - 5491681 - G 87 -8.1 -4.81212 | opp_overlap 5491691, overlap 5491683 TTGAGTACAATAAAA CCCGT GTCC ACGGG CAACCCCTTGTCCGG HRM2_48640 5492333 - 5492064 - | hypothetical protein TERM 6214 5492219 - 5492238 + g 100 -2.8 -6.10295 | opp_overlap 5492222, overlap 5492205 5492222 ACCTTGCCGTGAGGG AAACCTTC AGGT GAGGGTTA TTTTTTTTATCTTCA TERM 6215 5492222 - 5492235 + g 76 -4.5 -5.05442 | opp_overlap 5492222, overlap 5492205 5492219 TTGCCGTGAGGGAAA CCTTC AGGT GAGGG TTATTTTTTTTATCT TERM 6216 5493238 - 5493217 - g 70 -2.9 -4.83169 | ACGGCGGGATAAAAA GTCTGGAAC CGGC ACTCCCGAC CGCCGTCGAAACCTC HRM2_48650 5492664 - 5493596 + | hypothetical protein HRM2_48660 5494738 - 5493701 - | putative galactose-1-phosphate uridylyltransferase TERM 6217 5494522 - 5494540 + g 100 -7.4 -5.71712 | TCATGGCTTCAAGGT TGCCCG GACAGAA CGGGCA TTTTTTTGTGTCCAG TERM 6218 5494753 - 5494773 + r 86 -3.1 -5.64274 | overlap 5494752 5494754 5494758 TGGCCACTTCCTCCG GTACCCCCC CCA GGGGTATGC TTTTTTTGTGCCTAC HRM2_48670 5495717 - 5494785 - | hypothetical protein TERM 6219 5495026 - 5495012 - G 76 -4.2 -5.02074 | opp_overlap 5495012 TGACTCCGGAAAAAA CGGC CACCAAC GCCG TGTTGACAATCTGTC etfA4 5496762 - 5495728 - | EtfA4 TERM 6220 5496003 - 5495988 - G 73 -11.8 -2.62263 | opp_overlap 5495983 ATTCGGCGTAGACCA GGGGCC TTGT GGCCCC AACCTCTGCCTTCAT etfB4 5497610 - 5496759 - | EtfB4 acd16 5498752 - 5497622 - | Acd16 HRM2_48710 5499613 - 5498897 - | hypothetical protein TERM 6221 5499536 - 5499524 - G 78 -2.6 -5.23943 | CAGGAAAAAAACAAA CGCC CACAC GGCA AGGCATGCACCCGCC livF6 5500428 - 5499715 - | LivF6 livG5 5501176 - 5500412 - | LivG5 TERM 6222 5500507 - 5500495 - G 87 -7.7 -5.03314 | opp_overlap 5500506 GTGATCCGGAAAAAA TCAGG GAC CCTGA ATCCATGACATGGAT TERM 6223 5500506 - 5500524 + g 77 -10.4 -3.53811 | opp_overlap 5500495, overlap 5500509 AAAATCAGGGACCCT GAATCCAT GAC ATGGATTC TTTCGCACAGCTCAG livM5 5502053 - 5501181 - | LivM5 livH5 5502931 - 5502056 - | LivH5 TERM 6224 5502582 - 5502566 - G 82 -10.9 -3.85092 | overlap 5502581 AGCAGGCAGATTAAA GGTCTGA AAA TCAGACC CCCAGATGAGGCGGA TERM 6225 5502659 - 5502643 - G 74 -6.5 -4.43477 | overlap 5502645 TGGATGCAATTAAAA GGGCAAC CGG GTTGCTC TGCCTCAAGGGTCTG livK2 5504081 - 5502966 - | LivK2 argE 5505253 - 5504123 - | ArgE HRM2_48780 5506876 - 5505293 - | putative metal-dependent hydrolase TERM 6226 5505386 - 5505374 - G 71 -10.5 -3.06696 | opp_overlap 5505373 5505374 GTCCGCCGCAACAGA CCGGG GAT CCCGG CTTAATATGGTCAGG TERM 6227 5506735 - 5506751 + g 100 -6.5 -6.02546 | overlap 5506737 CCAGATCTATCTGTT GGGTACC CCG GGTACAC TTTTTTTTAATTTCC TERM 6228 5506940 - 5506956 + r 73 -3.6 -5.011 | opp_overlap 5506940, overlap 5506931 5506941 ACACGCCAATAGAAT GCAGGC TTTTT GCCTGG TTTTATTGTTTCCAT TERM 6229 5507210 - 5507248 + r 73 -10.4 -2.52742 | overlap 5507209 5507207 GTAATCATCAATTTT TTTCAGGCCGGAAATT GAATTGG ATTTTCCGGCCTGAAC GTCTTGTGCACCCCT HRM2_48790 5508390 - 5507272 - | hypothetical protein TERM 6230 5507369 - 5507392 + g 74 -6.8 -4.4078 | overlap 5507371 ATCCCTTCTTTTAAT TCCGAAAGAA CCTG TTCTTTCGTA TTTTCATTCCACACA TERM 6231 5507371 - 5507390 + g 75 -9.4 -3.8125 | overlap 5507369 CCCTTCTTTTAATTC CGAAAGAA CCTG TTCTTTCG TATTTTCATTCCACA HRM2_48800 5509081 - 5508770 - | hypothetical protein HRM2_48810 5511038 - 5509122 - | putative dipeptidyl anminopeptidase TERM 6232 5509608 - 5509586 - G 80 -13.5 -2.89921 | opp_overlap 5509579, overlap 5509577 AGGAACCGCCATAGA TGCCGATCC TGGCC GGATCGGCA ATCCCCTGGTCTATC TERM 6233 5510589 - 5510603 + g 76 -8.6 -4.21141 | overlap 5510579 TCTCCTGTTCATGCC GATGAG CAT CTCATC TTTGATTTCTTCCAG TERM 6234 5510884 - 5510916 + g 76 -6.9 -4.56775 | opp_overlap 5510895 GCCAGGGAAGTGCCG TCCGGAGAAAGCTGG AAC CCGGTCTGTTCCGGA TTTTTAAAAAACGAT HRM2_48820 5511301 - 5511080 - | hypothetical protein TERM 6235 5511407 - 5511394 - gR 70 -2.3 -4.9218 | overlap 5511395 GACTTATTATAAAAA CGGTC AACC GACCC TAGCTGAGACCGGTT HRM2_48830 5511272 - 5511490 + | hypothetical protein HRM2_48840 5512044 - 5511502 - | hypothetical protein TERM 6236 5512324 - 5512314 - g 83 -5.4 -5.11033 | TAGAATGGCAAAAAA TTCC CGT GGAA AACGCCCTTGTTCTA TERM 6237 5512427 - 5512417 - g 71 -6.8 -4.17048 | GCCTGCCGAAAAGAA CTCC ATC GGAG GCAATGTGAAAATTT HRM2_48850 5512303 - 5512677 + | hypothetical protein HRM2_48860 5512967 - 5513323 + | hypothetical protein HRM2_48870 5513326 - 5513877 + | hypothetical protein TERM 6238 5514009 - 5513995 - g 76 -5.6 -4.81814 | ACCAGTATAAGAAAA CGGGCA TCA TCCCCG CTCCCCTCTTACTGG TERM 6239 5514822 - 5514801 - g 70 -2.3 -5.01732 | gap 1, opp_overlap 5514812, overlap 5514803 5514806 5514808 AATCGCGGGAAAAAA GAGAAGATCA CGG TGACCCTC-C TTGATATCACCCTCA HRM2_48880 5513877 - 5515541 + | hypothetical protein HRM2_48890 5515538 - 5516200 + | hypothetical protein TERM 6240 5516224 - 5516270 + T 75 -8.9 -3.72909 | gap 1, opp_overlap 5516214 5516230, overlap 5516214 5516226 5516228 5516230 CACAACCTGTCTGAT TAAAAACAGGTCATCTCTTCGA TTAG TCGAAG-GATGGCCTGTCTGTG TTCTCTCTTCATTCA TERM 6241 5516226 - 5516268 + T 76 -9.3 -3.43636 | gap 1, opp_overlap 5516214 5516230, overlap 5516214 5516224 5516228 5516230 CAACCTGTCTGATTA AAAACAGGTCATCTCTTCGA TTAG TCGAAG-GATGGCCTGTCTG TGTTCTCTCTTCATT TERM 6242 5516228 - 5516266 + T 89 -11.9 -3.27503 | gap 1, opp_overlap 5516214 5516230, overlap 5516214 5516226 5516224 5516230 ACCTGTCTGATTAAA AACAGGTCATCTCTTCGA TTAG TCGAAG-GATGGCCTGTC TGTGTTCTCTCTTCA TERM 6243 5516230 - 5516264 + T 100 -14.5 -3.19116 | gap 1, opp_overlap 5516214 5516230, overlap 5516214 5516228 5516226 5516224 CTGTCTGATTAAAAA CAGGTCATCTCTTCGA TTAG TCGAAG-GATGGCCTG TCTGTGTTCTCTCTT TERM 6244 5516264 - 5516230 - T 100 -12.3 -4.72272 | gap 1, opp_overlap 5516214 5516228 5516226 5516224 5516230, overlap 5516214 CTGTCTGATTAAAAA CAGGTCATCTCTTCGA TTAG TCGAAG-GATGGCCTG TCTGTGTTCTCTCTT HRM2_48900 5517059 - 5516472 - | putative major facilitator superfamily protein HRM2_48910 5517430 - 5517098 - | signal transduction family protein (GGDEF domain protein) TERM 6245 5517200 - 5517210 + gr 80 -3.2 -5.27335 | overlap 5517196 TGCATTGTTTGCCTG TCCT ACC AGGG TTTTTATTTCCCGCC HRM2_48920 5517839 - 5517306 - | hypothetical protein TERM 6246 5517726 - 5517710 - GH 71 -8.7 -3.27994 | opp_overlap 5517709 TCAACTTCACATCAA TGCCCAA TGC CTGGGCA AGTTTAATCACTGGC HRM2_48930 5517987 - 5518241 + | putative transcriptional regulator TERM 6247 5518419 - 5518393 - g 76 -8 -4.20084 | opp_overlap 5518406 ACCATGTAGCGAAAA GCAGTACCCACC TGC AGTCAGTACTGC TTTTTTTGAAAACTT TERM 6248 5518406 - 5518419 + G 100 -6.7 -5.41746 | opp_overlap 5518393 AAGCAGTACCCACCT GCAGT CAGT ACTGC TTTTTTTGAAAACTT TERM 6249 5518471 - 5518447 - g 71 -5.7 -4.36914 | opp_overlap 5518451, overlap 5518450 5518451 CTTGCTTCCAGAAAA TAATGCCAGAA CGA TTCTGGCTTTC AATCATCGATTTGAC TERM 6250 5518468 - 5518450 - g 76 -7.4 -4.30995 | opp_overlap 5518451, overlap 5518447 5518451 GCTTCCAGAAAATAA TGCCAGAA CGA TTCTGGCT TTCAATCATCGATTT TERM 6251 5518467 - 5518451 - g 71 -10.9 -3.18115 | opp_overlap 5518451, overlap 5518450 5518447 CTTCCAGAAAATAAT GCCAGAA CGA TTCTGGC TTTCAATCATCGATT TERM 6252 5518451 - 5518467 + G 80 -10.9 -3.69094 | opp_overlap 5518451 5518450 5518447 CTTCCAGAAAATAAT GCCAGAA CGA TTCTGGC TTTCAATCATCGATT hipA 5518238 - 5519521 + | HipA TERM 6253 5519562 - 5519552 - gT 80 -3.2 -5.26119 | CCCTCAAAAATAAAA CCAA ATT TCGG AACTGGACCCAGGCT HRM2_48960 5520055 - 5519792 - | hypothetical protein HRM2_48950 5519533 - 5519844 + | putative transcriptional regulator higA 5520244 - 5520579 + | HigA TERM 6254 5520799 - 5520773 - g 72 -8.1 -3.85704 | gap 1, opp_overlap 5520790 CGATTAACTATGAAA CTGCGAACAAGC TTGA GCTTGT-CACAG GTGTTCCTGCAAGAT HRM2_48980 5520592 - 5521698 + | hypothetical protein TERM 6255 5521705 - 5521684 - T 100 -11.6 -5.52079 | opp_overlap 5521686 ATATTAAAACAAAAA GAGCCCCT AAGTTA AGGGGCTC TTAACATCAAACTTT HRM2_48990 5523022 - 5521940 - | hypothetical protein TERM 6256 5523180 - 5523168 - R 80 -10.5 -3.49475 | opp_overlap 5523160 CCTATTCCCATATAA CCGGC ATG GCCGG AGCATGGTATCTGTC TERM 6257 5523280 - 5523313 + r 70 -5.3 -4.43477 | gap 1, opp_overlap 5523298, overlap 5523292 CCAAAACGCATTTAT TACGCAGCGCTCGC AAAATAC GTGCGCGCT-CGTA TTTTGGTTACCTCCG HRM2_49000 5524987 - 5523320 - | putative transcriptional regulator TERM 6258 5525269 - 5525255 - R 71 -4.2 -4.88067 | AGGTATTTATAAAAA CGGTTA AGG TGACCG AATATAACCTTTTCG TERM 6259 5525294 - 5525311 + r 95 -12.7 -3.36968 | opp_overlap 5525294 TTTTCGATTACAAAA GCCCCGT ATTC ACGGGGC TTATAAAATTAAATA TERM 6260 5525311 - 5525294 - R 100 -12.7 -4.46212 | opp_overlap 5525294 TTTTCGATTACAAAA GCCCCGT ATTC ACGGGGC TTATAAAATTAAATA prkC 5526802 - 5525327 - | PrkC TERM 6261 5525825 - 5525840 + g 71 -6.1 -4.30576 | overlap 5525817 CAGATAAGCCTGCCG GGCTG CCTTTA CAGCC TTTTCATACTCCCCG HRM2_49020 5527382 - 5526804 - | hypothetical protein TERM 6262 5526888 - 5526917 + g 100 -10.7 -5.18355 | opp_overlap 5526887 5526886, overlap 5526889 TGAAAAAAGAAACTT TGCACCAGGGTTG CCAT TGACCCTGGTGCC TTTTTGATTTTTAAA TERM 6263 5526889 - 5526916 + g 93 -14.2 -3.69386 | opp_overlap 5526887 5526886, overlap 5526888 GAAAAAAGAAACTTT GCACCAGGGTTG CCAT TGACCCTGGTGC CTTTTTGATTTTTAA HRM2_49030 5529060 - 5527375 - | hypothetical protein TERM 6264 5528027 - 5528015 - G 73 -10.5 -3.25652 | opp_overlap 5528013, overlap 5528013 TTCATGGAAGCAACA GCCGC ACT GCGGC CATTCAATGCTTTGG HRM2_49040 5530197 - 5529064 - | hypothetical protein TERM 6265 5529172 - 5529204 + g 78 -13.5 -2.63159 | opp_overlap 5529189, overlap 5529168 5529162 ATTCAGCAATTTCAA CTGTTGTTGCCCCAA CAG TTGTGGCAACGGCAG TGCATTACTTCTATT HRM2_49050 5531060 - 5530197 - | hypothetical protein HRM2_49060 5535360 - 5531062 - | hypothetical protein TERM 6266 5532774 - 5532746 - G 79 -8.8 -4.19879 | opp_overlap 5532745 AGAAAAGTGGGAAAA CTTGCCTGGGCC TGGGT GGGCGAGGCAAG ATGATTGAACAAACC TERM 6267 5532963 - 5532948 - G 86 -8.2 -4.6955 | CATCAATACACAAAA GCCGCC ATGC AGCGGC CAGCAACCGTCGATC HRM2_49070 5536640 - 5535357 - | hypothetical protein HRM2_49080 5538561 - 5536630 - | hypothetical protein TERM 6268 5536741 - 5536763 + g 71 -6.4 -4.43012 | overlap 5536738 TCCCTGACTGACCAG CTTTGAAAGA TGA TTTTTCAAGG TTTTCATCTTCCGGT TERM 6269 5538130 - 5538118 - G 71 -7.7 -4.09739 | opp_overlap 5538117 5538113 GGAAGCGTCGGAAAA CATCC GCC GGATG CTCTCTTCCGTGGCA TERM 6270 5538177 - 5538190 + g 74 -8.1 -4.0156 | overlap 5538179 GGGTGCGGACATAGG TCCCC CGAA GGGGA TTGTTATTGATATAA hsdS3 5540144 - 5538558 - | HsdS3 hsdM3 5542159 - 5540141 - | HsdM3 HRM2_49110 5542627 - 5542217 - | hypothetical protein HRM2_49120 5543892 - 5542624 - | hypothetical protein TERM 6271 5544095 - 5544107 + r 74 -6.3 -4.50993 | TATCAACATTTTTTA TCCTT CGC AAGGA TTTATATTTATTTAG TERM 6272 5544239 - 5544258 + r 82 -3.4 -5.49568 | TCGTTAAAGGTTGGA GCGCTTCC TGGG GGATACGC TTTTTATTTTGGATT HRM2_49130 5545226 - 5544216 - | hypothetical protein HRM2_49140 5549681 - 5545251 - | hypothetical protein TERM 6273 5546195 - 5546226 + g 72 -8.1 -3.91676 | gap 2, opp_overlap 5546193, overlap 5546197 5546217 CATCATGGAGAATTC TGTCTATCGCCTGGG TAAT CCC-GGCGATAG-CG TCTTTTGATTTATCC TERM 6274 5547558 - 5547539 - G 73 -9.3 -3.6682 | opp_overlap 5547541 TGCTATTTACCGAAA GACCCTC TTGCTG GAGGGTC AGTTCAACCGGCCCA TERM 6275 5548342 - 5548355 + g 74 -3.7 -5.04385 | GTCTTTTGTTCATTG CGGGC GTCT GCCAG TTTTTTGCGAATATC HRM2_49150 5550394 - 5549699 - | hypothetical protein TERM 6276 5549854 - 5549838 - G 72 -3.7 -4.86731 | GTCTGGGAAATAAAA TTTCGTG ACT CAAGAAA CGAAAAAGCAAATTT TERM 6277 5549877 - 5549899 + g 83 -9.8 -4.2687 | GCAAATTTGACCGCC CACGCCAGGG ATC CCCTTGTGTG TTTCTCGTTTTTGCG HRM2_49160 5551839 - 5550391 - | hypothetical protein TERM 6278 5551483 - 5551497 + g 84 -2.1 -5.53288 | CGAATAAATACGATC GGTAA ACTCC TTGCC TTTTTTTACATTCAA TERM 6279 5552129 - 5552117 - R 70 -5.5 -4.55295 | opp_overlap 5552125, overlap 5552124 5552125 TTTTCGATAAACAAA CCCAA AAC TCGGG ACTGGGCCCAGAATT TERM 6280 5552471 - 5552451 - R 88 -9.7 -4.09864 | overlap 5552452 ACGGATCTTTTAAAA CCCCTGCTT TAA AAGCAGGGC TGGTCGAAAAGACCA TERM 6281 5552470 - 5552452 - R 95 -13.2 -3.05597 | overlap 5552451 CGGATCTTTTAAAAC CCCTGCTT TAA AAGCAGGG CTGGTCGAAAAGACC TERM 6282 5552563 - 5552538 - R 100 -6.9 -6.02914 | GTGATACAAAAAAAA GGATGTAAAAC CGAA GCCTTACACCC TAAAAGTTTACAATT HRM2_49170 5553092 - 5552595 - | single-strand binding protein (Helix-destabilizing protein) TERM 6283 5553095 - 5553108 + H 77 -3.9 -5.19998 | TAACGCCAGCCATGA TAAAC TCCT GTTTA TTTTGTTTTAATTAT TERM 6284 5554052 - 5554036 - g 84 -2.3 -5.63504 | AACGGCAGAAAAAAA TTTCC GGAACGT GGAAA CGCCCCTTATCTTTG HRM2_49180 5553254 - 5554429 + | putative N6-adenine-specific DNA methylase TERM 6285 5554436 - 5554464 + T 100 -10.2 -4.58283 | opp_overlap 5554439, overlap 5554438 5554439 ATCCACTGAAAAAGA AAAGCCCGGGTC AAAAC GACCCGGGCATG TTTTTACAGAAATTA TERM 6286 5554438 - 5554462 + T 100 -12.8 -3.90316 | opp_overlap 5554439, overlap 5554436 5554439 CCACTGAAAAAGAAA AGCCCGGGTC AAAAC GACCCGGGCA TGTTTTTACAGAAAT TERM 6287 5554439 - 5554461 + T 100 -16.3 -2.93708 | opp_overlap 5554439, overlap 5554438 5554436 CACTGAAAAAGAAAA GCCCGGGTC AAAAC GACCCGGGC ATGTTTTTACAGAAA TERM 6288 5554461 - 5554439 - T 100 -17 -5.2853 | opp_overlap 5554438 5554436 5554439 CACTGAAAAAGAAAA GCCCGGGTCA AAA CGACCCGGGC ATGTTTTTACAGAAA acd17 5556306 - 5554492 - | Acd17 TERM 6289 5554860 - 5554877 + g 71 -5.5 -4.45083 | GGATAGCGGGAATCT CCTTTGC CCCA GCAACGG TTTTCTGCATCTCAC TERM 6290 5555635 - 5555652 + g 79 -12.7 -3.05384 | CAAGGAGATGCCCTT GGTGCCC TCGG GGGCACC TTCAATGCGGGCAAG TERM 6291 5556676 - 5556701 + H 79 -11.2 -3.13566 | opp_overlap 5556676, overlap 5556674 ATCGAATATTAAAAA CAGGGGGTTA TTTACT TGACCCCCTG TCTTCCGTCTGGTAT TERM 6292 5556701 - 5556676 - H 100 -9 -4.88228 | opp_overlap 5556676 5556674 ATCGAATATTAAAAA CAGGGGGTTA TTTACT TGACCCCCTG TCTTCCGTCTGGTAT dppA4 5556810 - 5558363 + | DppA4 TERM 6293 5558404 - 5558364 - f 100 -12.6 -3.90922 | gap 1, overlap 5558365 ATTGTCGTTAAATAA CCGGCATGGCCGGA-GCCA GACA CGGCTTCCGGCCATAACGA AGCATGAAACTTAGA TERM 6294 5558403 - 5558365 - f 100 -13.9 -2.94232 | gap 1, overlap 5558364 TTGTCGTTAAATAAC CGGCATGGCCGGA-GCCA GACA CGGCTTCCGGCCATAACG AAGCATGAAACTTAG TERM 6295 5558609 - 5558597 - f 89 -10.5 -4.04206 | CGAGTTTCATATAAA CCGGC ACG GCCGG ATCGAGTTATGGTTC TERM 6296 5558722 - 5558692 - f 100 -5.4 -6.30182 | TCATATAAAAAAAAA GGGGCAGACTGT TTCAACC AAAGTCTGACCC CATTACAGAGAACAT TERM 6297 5558840 - 5558830 - g 71 -5.4 -4.47707 | TGCCATTAAAAATAA GATC GGT GATC CTGTCCGGGACCTTG dppB3 5558744 - 5559727 + | DppB3 TERM 6298 5559804 - 5559816 + G 90 -6.3 -5.32882 | CGCCAGGATCAGCTT TGTCA TTC TGACA TTTTTTCTGCTGCTG TERM 6299 5559897 - 5559939 + G 86 -11.9 -3.96148 | opp_overlap 5559897 CACGGATCTCATGAA TTCCGAGATTCCACCGGCC TTCAT GGACGGCGGAACCACGGAA TTTCTCCTGGGCACG TERM 6300 5559939 - 5559897 - g 100 -16.3 -3.16881 | opp_overlap 5559897 CACGGATCTCATGAA TTCCGAGATTCCACCGGCC TTCAT GGACGGCGGAACCACGGAA TTTCTCCTGGGCACG dppC3 5559724 - 5560644 + | DppC3 TERM 6301 5561224 - 5561198 - g 75 -10.9 -3.43676 | gap 1 CTGACGAACCCACAA CGGCCCTGGACG TAAC CATCCAG-GCCG AAATCATGGACCTTC oppD 5560651 - 5561610 + | OppD TERM 6302 5562493 - 5562477 - g 71 -5.7 -4.32571 | opp_overlap 5562487, overlap 5562478 CAACATAAAACTAAA GGGAGAG GTG CCCACCC CGGTGCACCTTCCAA appF2 5561614 - 5562642 + | AppF2 HRM2_49250 5562659 - 5563780 + | ABC-type transporter, permease protein HRM2_49260 5563785 - 5564540 + | ABC-type transporter, ATP-binding protein TERM 6303 5564628 - 5564648 + G 80 -2.4 -5.40072 | overlap 5564624 5564630 GCTGGTAACTGCCCT TGCCCTGC TCGGT GCCGGGGA TTTTTTTAAGCAGGA HRM2_49270 5564554 - 5565573 + | ABC-type transporter, periplasmic substrate-binding protein TERM 6304 5566080 - 5566068 - g 76 -2.7 -5.18357 | overlap 5566060 5566069 CAACCGACGAAAAAA CCTTT TCA AAAGA GACGGCAATCAAGGA HRM2_49280 5565563 - 5566195 + | hypothetical protein HRM2_49290 5566916 - 5566326 - | hypothetical protein HRM2_49300 5568193 - 5566928 - | GGDEF domain protein TERM 6305 5567403 - 5567419 + g 87 -4.3 -5.41746 | overlap 5567418 GCAAATGCCAGGGGA CGATCGG TTT CCAGTCG TTTTTTTAAAACGTT TERM 6306 5567418 - 5567432 + g 74 -7.2 -4.18018 | overlap 5567403 CGATCGGTTTCCAGT CGTTTT TTT AAAACG TTTTCAATGGCAACC TERM 6307 5568076 - 5568062 - G 70 -10 -3.29511 | opp_overlap 5568062 CCGACGCCCGTATAA CTCCTG GGC CAGGAG TTCATCCACCAGCTT HRM2_49310 5569381 - 5568503 - | integral membrane protein TERM 6308 5568719 - 5568706 - G 80 -4.5 -5.07107 | overlap 5568707 CAAAGGTGGAAAAAA CGGCT ATGG AGCCA AGGGCCACCCAGGCA TERM 6309 5569280 - 5569226 - G 90 -6.2 -5.29846 | overlap 5569227 5569229 5569237 5569250 5569255 AACCGCAAACAAAAA CCAGGCAAGCATTGCCCGCCAGAAGG CAA CCTCAAGGGGGGCAACCCCCTCCTGA AAGGCCATCTTCCCA TERM 6310 5569243 - 5569227 - G 73 -8.7 -3.76281 | overlap 5569226 5569229 5569237 ACCGCAAACAAAAAC CAGGCAA GCA TTGCCCG CCAGAAGGCAACCTC HRM2_49320 5569521 - 5569865 + | hypothetical protein pflD2 5572331 - 5569971 - | PflD2 pflC2 5573276 - 5572368 - | PflC2 TERM 6311 5572433 - 5572447 + g 80 -2.9 -5.24531 | TGGTAATCTGTAATT TTGAA ACCGG TTCAA TTTTTTCTCCAGGAT TERM 6312 5572947 - 5572966 + g 76 -2.7 -5.16572 | TTCCATCAGGCTGTC CGTGCTG TGACAT CGGCCCG TTTTTTCCATTGCGT ogt 5573790 - 5573296 - | Ogt TERM 6313 5573622 - 5573638 + g 90 -10.1 -4.5187 | opp_overlap 5573622 CAAAATAGGCAACGA GCTGGTC CAT GACCGGC TTTACTTTTTTTGGG HRM2_49360 5574520 - 5573783 - | hypothetical protein TERM 6314 5574595 - 5574584 - R 88 -3 -5.85244 | overlap 5574592 AATTAAAACAAAAAA TCAA TATA TTGA AATTAATTCAAGATT recD3 5576804 - 5574603 - | RecD3 TERM 6315 5575266 - 5575248 - GR 79 -5.2 -4.93877 | opp_overlap 5575248 5575254 5575256 CTCGATGAAATAAAA CTCTGACA GCC CGTCTGAG CTGTTCTCAAGGCAG TERM 6316 5575995 - 5575976 - GR 81 -9.2 -3.78934 | CCTGTTCCACAACAA CCTCGCCG GCAT CGGCCAGG GCCCCCAGGGCCTTT TERM 6317 5575995 - 5576007 + gr 91 -10.5 -4.14472 | GCCGGCATCGGCCAG GGCCC CCA GGGCC TTTTCAACATCTTCC TERM 6318 5576204 - 5576194 - GR 71 -6.8 -4.13767 | TCCGCCACCTCAAAA CCTG CCT CAGG AACGTCCTTTGATAC TERM 6319 5576670 - 5576688 + gr 100 -11.6 -4.87389 | overlap 5576672 CACCACCACAACGGC GTCCCGGG TCT CCCGGGTC TTTATTTTTGCGATG TERM 6320 5576672 - 5576686 + gr 100 -12.8 -4.04587 | overlap 5576670 CCACCACAACGGCGT CCCGGG TCT CCCGGG TCTTTATTTTTGCGA gmhB 5577343 - 5576762 - | GmhB TERM 6321 5577263 - 5577251 - GR 76 -6.9 -4.41616 | opp_overlap 5577228 5577227 ACTGCCGGAAATAAA CCGGA ACT CCCGG GGCGTTTTAATGTAC HRM2_49390 5578141 - 5577347 - | RlpA-like lipoprotein precursor TERM 6322 5577864 - 5577876 + g 82 -6.9 -4.85599 | overlap 5577865 TACATGTCGTAAATT TCGCC GTT GGCGG TTTTTCTGCCGTGGA lonA 5580501 - 5578141 - | LonA HRM2_49410 5580973 - 5580527 - | small heat shock protein (Hsp20 family protein) HRM2_49420 5582257 - 5581076 - | putative major facilitator transport protein (MFS superfamily) TERM 6323 5582307 - 5582283 - R 100 -11.4 -5.68438 | TGATTAAACAAAAAA GGGCCGGGAA AAACG CTCCCGACCC TGGATGAATCATGTC porA4 5585835 - 5582332 - | PorA4 TERM 6324 5583327 - 5583344 + g 73 -11.3 -3.02371 | overlap 5583324 AGATGGACGTACAGC CCGTTGC ATTG GCAACGG TCATTCTTTCGCCAA TERM 6325 5584434 - 5584461 + g 83 -3.4 -5.48825 | overlap 5584447 GCACATCGCCGAATC TCAGGTGGGA AATGGTGA TACCGCCTGA TTTTTTTGAATCGTA TERM 6326 5585354 - 5585330 - G 70 -2.7 -4.84017 | AACCCGTCATAAAAA TGCATGAACGG CAC CCGCCCTTCCA GGGTTGCAAGGTGGG HRM2_49440 5586118 - 5586732 + | hypothetical protein HRM2_49450 5586738 - 5587271 + | hypothetical protein TERM 6327 5587327 - 5587355 + F 100 -10.3 -5.64421 | opp_overlap 5587327 AGACACAACCTGAAA GGCATGACGATTT AAA ATACCGTCATGCC TTTTTTGTTTAAAAT TERM 6328 5587355 - 5587327 - f 100 -12.5 -3.71213 | opp_overlap 5587327 AGACACAACCTGAAA GGCATGACGATTT AAA ATACCGTCATGCC TTTTTTGTTTAAAAT HRM2_49460 5587893 - 5588315 + | hypothetical protein SEQUENCE gi|224371993|ref|NC_012109.1| Desulfobacterium autotrophicum HRM2 plasmid pHRM2a, complete sequence (length 68709) parA 181 - 1002 + | ParA-like family protein (ATPase) TERM 1 1748 - 1783 + G 76 -4.8 -5.06103 | opp_overlap 1748 1750 GCCTCTTATATGACA GACAGACAGATATATA ATAA TAAAAATCTATCTGTC TTTTTTAAAAATTCT HRM2_p00020 1004 - 2293 + | hypothetical protein HRM2_p00030 2557 - 2354 - | hypothetical protein HRM2_p00040 2688 - 2491 - | hypothetical protein HRM2_p00060 3109 - 2843 - | hypothetical protein HRM2_p00050 2782 - 3051 + | hypothetical protein HRM2_p00070 3194 - 3511 + | hypothetical protein HRM2_p00080 3607 - 4053 + | hypothetical protein TERM 2 4456 - 4470 + T 72 -7.1 -4.07568 | opp_overlap 4466 4467, overlap 4465 TTTTTTTATTGTTTC CCACC CGAAA GGTGG TTTTCGCAGAAAACC TERM 3 4925 - 4937 + T 77 -4.9 -4.96028 | overlap 4929 TTTTAAACGACTGAT TTTAC AAT GTAAA TTGTTTTTTTTACAA TERM 4 4929 - 4940 + T 88 -3 -5.75342 | opp_overlap 4939, overlap 4925 AAACGACTGATTTTA CAAT GTAA ATTG TTTTTTTTACAAAGA HRM2_p00090 6076 - 5882 - | hypothetical protein TERM 5 6511 - 6533 + r 70 -3.5 -4.89054 | opp_overlap 6511 6513, overlap 6513 TCTGTTGGGAATAAA TATTCAGAT ACGAG ATCTGAATC TTCTTTTTTTGTCAA HRM2_p00100 6770 - 6489 - | hypothetical protein TERM 6 7167 - 7148 - g 74 -12.2 -2.85193 | overlap 7145 7143 AACATAAAGAGATCA TCGGCTCA ACAT TGAGCCGA GAGGAATTGTGGAAT traA 6988 - 8637 + | TraA; conjugal transfer protein TraA HRM2_p00120 8872 - 8663 - | hypothetical protein HRM2_p00130 10036 - 9080 - | hypothetical protein TERM 7 10093 - 10107 + H 79 -8.6 -4.08651 | CTTTATTTATAGGTG GTCTAC TTA GTAGAC TTGTTTACTTAAAGT HRM2_p00140 10304 - 10474 + | hypothetical protein HRM2_p00150 10493 - 11299 + | hypothetical protein HRM2_p00160 11851 - 11315 - | hypothetical protein istB 12600 - 11860 - | IstB; ATP-binding insertion sequence protein IstB (IstB-like family protein) TERM 8 12328 - 12345 + g 76 -2.7 -5.1675 | TTCCATGTAGTCCGA GTCATAA ATGT TAATGAC TTTTTTCCTGGATAG istA 14095 - 12593 - | IstA; transposase IstA (IS21/IS408/IS1162 family protein) parB 14975 - 14052 - | predicted ParB-like family protein HRM2_p00200 15535 - 15062 - | hypothetical protein TERM 9 15506 - 15521 + g 82 -6.8 -4.89233 | opp_overlap 15497 GAAAAGGCGGCCACA GTGACG GCAA CGTCGC TTTTTAATATTCATC HRM2_p00210 15934 - 16068 + | hypothetical protein TERM 10 16179 - 16144 - f 100 -16.5 -3.55622 | opp_overlap 16149 GGCAAGGGTTTTAAA TCGAATGCTTAGTTT TGACAT AAACTAAGCATTCGA TTGAAAAAAGTAGGG TERM 11 16149 - 16174 + F 72 -9.2 -3.17075 | opp_overlap 16144 GGGTTTTAAATCGAA TGCTTAGTTT TGACAT AAACTAAGCA TTCGATTGAAAAAAG HRM2_p00220 16639 - 16791 + | hypothetical protein TERM 12 16836 - 16825 - g 74 -2.2 -5.19212 | ACCAGTATTAAAAAA CTGC TTTT ACAG AATATGCTTTTTATA TERM 13 17114 - 17104 - g 72 -4 -4.80487 | TATAATGAAAATAAA GATT CGA AATC CCATGATGAAATAAA TERM 14 17483 - 17465 - g 73 -3.1 -5.05153 | overlap 17467 ATGTCAAAAAAGAAA TTCAGGA GGAAG TCCTGGA AAGAATTTCAAAGCT HRM2_p00230 16807 - 19959 + | sensory box histidine kinase/response regulator protein resE 19952 - 20698 + | predicted sensor protein ResE TERM 15 23199 - 23183 - g 82 -8.1 -4.57837 | AGACGGGTGGAAAAA TTTCAGT ACA ACTGAAA GAGATTACATTGGAT HRM2_p00250 21283 - 23910 + | putative sensorkinase/phosphatase protein TERM 16 24209 - 24193 - f 74 -9.5 -3.29144 | opp_overlap 24191 24187 CCATCCTTCTTATAA CCTTGTT GTC AACAAGG TATACCTTATTGACA TERM 17 24826 - 24810 - g 73 -5.8 -4.58585 | CAGGTAAAGAACAAA GCAGGG ATGAA CCCTAC CATACTTTCGAATGA cin 24333 - 24893 + | DNA-invertase HRM2_p00270 25237 - 24917 - | Transcriptional regulator HRM2_p00280 25593 - 25243 - | hypothetical protein TERM 18 25301 - 25332 + g 100 -10.8 -5.75342 | opp_overlap 25299, overlap 25304 TTGATCAAATCCATA TCTGGCCTGGGTGT TGCT ATACCCTGGCCTGA TTTTTTTTGAAAACA TERM 19 25304 - 25329 + g 79 -11.1 -3.60685 | opp_overlap 25299, overlap 25301 ATCAAATCCATATCT GGCCTGGGTGT TGCT ATACCCTGGCC TGATTTTTTTTGAAA HRM2_p00290 25760 - 25626 - | hypothetical protein HRM2_p00300 26284 - 25880 - | Transposase HRM2_p00310 26635 - 26345 - | Transposase HRM2_p00320 26807 - 27025 + | DNA-invertase TERM 20 27014 - 27032 + T 81 -4.4 -5.28315 | overlap 27015 TGGGTCCCAGCCTCT GCGAACGC TTA GCGTACGA TTTTTTCCCTTTTCT TERM 21 27015 - 27031 + T 72 -7.9 -3.74549 | overlap 27014 GGGTCCCAGCCTCTG CGAACGC TTA GCGTACG ATTTTTTCCCTTTTC HRM2_p00330 27860 - 27201 - | putative transcriptional regulatory TERM 22 27652 - 27664 + g 74 -7.7 -4.18494 | GGTCTTTTTTGTTTT TGCTC TCT GAGCA TTTTGCATAAAGCTG rpfC 31936 - 27986 - | predicted sensory/regulatory protein RpfC TERM 23 28689 - 28704 + g 78 -6.1 -4.90525 | opp_overlap 28689 CCGTTGGTTACAGCA TGGGC AGCAAA GCCCA TTTTCTTTAAGATTC TERM 24 30056 - 30066 + g 95 -5.4 -5.54338 | TTCGTCTTCAAAATT TTGC TGA GCAA TTTTTCTTTTACTTA TERM 25 31148 - 31134 - G 70 -4.3 -4.63089 | opp_overlap 31134 GAGTTGAAAAAAGAA CGAAA ATTCG TTTCG CTTTTCTTGAGTCGT HRM2_p00350 32149 - 31955 - | hypothetical protein HRM2_p00360 33960 - 32320 - | transposase TERM 26 33143 - 33117 - G 78 -2.2 -5.252 | opp_overlap 33123, overlap 33123 CAGCTTCAGAAAAAA CTACAATCCAGC GTT GCTGGATCTCAT AATGCTCTATTTCAA TERM 27 33137 - 33123 - G 78 -10 -3.83985 | opp_overlap 33123, overlap 33117 CAGAAAAAACTACAA TCCAGC GTT GCTGGA TCTCATAATGCTCTA TERM 28 33992 - 34019 + H 100 -8.6 -5.28481 | CATCTTTCTTTGTGG TGATTTAAGTTG GAGG CATCTTAAATCA TTTTTTAATTAAATG resR 34338 - 34946 + | DNA-invertase HRM2_p00380 35540 - 35737 + | hypothetical protein, excisionase family member TERM 29 37650 - 37624 - g 79 -5.1 -5.02074 | overlap 37630 GTAGTCGGCAAAAAA GTCAAAGTCCT CATTC AGGACATGGAC AAGGTTCGCTGGAAG HRM2_p00390 35734 - 38973 + | putative DNA/RNA-dependent helicase, SNF II family domain protein HRM2_p00400 38963 - 39727 + | hypothetical protein TERM 30 41122 - 41102 - g 71 -6.8 -4.2416 | opp_overlap 41101 41102 CAATCCAACAAAGAA TGAGCAGC AAACA GCAGCTCA ATATTGTATCCAAAA HRM2_p00410 39744 - 41648 + | site-specific DNA-methyltransferase (Type III DNA modification enzyme) HRM2_p00420 41650 - 42120 + | putative DEAD/DEAH box helicase, Type III restriction enzyme (subunit) HRM2_p00430 42746 - 42435 - | hypothetical protein HRM2_p00440 43834 - 42935 - | transcriptional regulator (MerR family protein) HRM2_p00450 43887 - 44012 + | hypothetical protein parE 44461 - 44162 - | predicted plasmid stabilisation protein ParE HRM2_p00470 44675 - 44451 - | hypothetical protein HRM2_p00480 45306 - 44734 - | DNA integration family protein TERM 31 44922 - 44934 + g 75 -9.1 -3.91488 | overlap 44928 TGGCTGCCGCTATCC CGGCA AGC TGCCG TTCTTTGCGGAGATT TERM 32 45356 - 45328 - R 100 -13.3 -4.72272 | opp_overlap 45328 CCCCTCTATTAAAAA GGTCTAAAGTGTC AAA AACACCTTAGACC TTTTTGGAAAGGGTG TERM 33 45328 - 45356 + r 100 -10.4 -4.57073 | opp_overlap 45328 CCCCTCTATTAAAAA GGTCTAAAGTGT CAAAA ACACCTTAGACC TTTTTGGAAAGGGTG HRM2_p00490 46268 - 45684 - | hypothetical protein TERM 34 46474 - 46513 + r 93 -10.9 -4.1673 | gap 2, overlap 46480 TGTCCATTCAACGTC GCTATT-CAGCCG-CGCGG TTTT TTGCGTCGGCTGAAATAGC TTTGTTGGGCAATTG TERM 35 46480 - 46490 + r 71 -2.4 -5.09225 | overlap 46474 TTCAACGTCGCTATT CAGC CGC GCGG TTTTTTGCGTCGGCT HRM2_p00500 47411 - 46572 - | hypothetical protein TERM 36 47489 - 47528 + r 84 -10.9 -3.58428 | gap 2, opp_overlap 47497, overlap 47486 47487 ATGAGCCCCAACGCC GCTAAT-CAGCCG-CGCGG CTTT TTGCGTCGGCTGCATTAGC TTGGTTATGTTTCCG HRM2_p00510 48493 - 48182 - | hypothetical protein HRM2_p00520 49581 - 48682 - | hypothetical protein HRM2_p00530 50208 - 49909 - | hypothetical protein HRM2_p00540 50422 - 50198 - | hypothetical protein binR 51053 - 50481 - | BinR; DNA-invertase from transposon Tn552 BinR (site-specific recombinase) TERM 37 50669 - 50681 + g 75 -9.1 -3.91488 | overlap 50675 TGGCTGCCGCTATCC CGGCA AGC TGCCG TTCTTTGCGGAGATT TERM 38 51075 - 51103 + r 100 -10.4 -4.57073 | opp_overlap 51075 CCCCTCTATTAAAAA GGTCTAAAGTGT CAAAA ACACCTTAGACC TTTTTGGAAAGGGTG TERM 39 51103 - 51075 - R 100 -13.3 -4.72272 | opp_overlap 51075 CCCCTCTATTAAAAA GGTCTAAAGTGTC AAA AACACCTTAGACC TTTTTGGAAAGGGTG HRM2_p00560 52015 - 51431 - | hypothetical protein TERM 40 52221 - 52260 + r 93 -10.9 -4.1673 | gap 2, overlap 52227 TGTCCATTCAACGTC GCTATT-CAGCCG-CGCGG TTTT TTGCGTCGGCTGAAATAGC TTTGTTGGGCAATTG TERM 41 52227 - 52237 + r 71 -2.4 -5.09225 | overlap 52221 TTCAACGTCGCTATT CAGC CGC GCGG TTTTTTGCGTCGGCT HRM2_p00570 53158 - 52319 - | hypothetical protein TERM 42 53236 - 53275 + r 84 -10.9 -3.58428 | gap 2, opp_overlap 53244, overlap 53233 53234 ATGAGCCCCAACGCC GCTAAT-CAGCCG-CGCGG CTTT TTGCGTCGGCTGCATTAGC TTGGTTATGTTTCCG HRM2_p00580 54167 - 53280 - | hypothetical protein TERM 43 54202 - 54225 + r 100 -14.6 -3.11619 | gap 1, opp_overlap 54190 54202, overlap 54193 TAACGCCTGAATTAA GCCGA-GCCGC GAA GCGGCTTCGGC TTGAATGAATTGTTA TERM 44 54225 - 54202 - R 100 -14.6 -3.3482 | gap 1, opp_overlap 54202 54193, overlap 54190 TAACGCCTGAATTAA GCCGA-GCCGC GAA GCGGCTTCGGC TTGAATGAATTGTTA HRM2_p00590 54846 - 54238 - | hypothetical protein TERM 45 54875 - 54931 + r 100 -21 -3.68341 | overlap 54876 54877 CCGTTTGAGCGCTAA CGCC-GCCAGCAGGGGCTGGCGAACCGC GCA GCGGTTTGGCAGTCCCT-CTGGCTGGCC TTGTTAGGTACCCTT TERM 46 54876 - 54930 + r 100 -24.5 -2.80522 | overlap 54875 54877 CGTTTGAGCGCTAAC GCC-GCCAGCAGGGGCTGGCGAACCGC GCA GCGGTTTGGCAGTCCCT-CTGGCTGGC CTTGTTAGGTACCCT HRM2_p00600 55084 - 54935 - | hypothetical protein HRM2_p00610 55253 - 55068 - | hypothetical protein TERM 47 55306 - 55356 + r 75 -9.1 -3.73068 | gap 2, opp_overlap 55319 55325, overlap 55325 TTGTCACCTAACGCT TGAGCT-CAGCC-AACCGAAACCGC GTA GCGGTTTTGGGTCGGCTGCAGCGAA TTGTTAGGTTAAAAA TERM 48 55341 - 55319 - R 86 -12 -3.06796 | opp_overlap 55306 55325, overlap 55325 CTTGAGCTCAGCCAA CCGAAACCGC GTA GCGGTTTTGG GTCGGCTGCAGCGAA TERM 49 55335 - 55325 - R 75 -8.2 -3.76952 | opp_overlap 55306 55325, overlap 55319 CTCAGCCAACCGAAA CCGC GTA GCGG TTTTGGGTCGGCTGC TERM 50 55325 - 55335 + r 79 -8.2 -4.1899 | opp_overlap 55325 55319, overlap 55306 CTCAGCCAACCGAAA CCGC GTA GCGG TTTTGGGTCGGCTGC HRM2_p00620 55866 - 55360 - | hypothetical protein HRM2_p00630 56402 - 55884 - | hypothetical protein TERM 51 56490 - 56504 + r 88 -10 -4.18644 | ACCTGGTCAGGTTTA GCGCTA GGT TAGCGC TTTGATTTGTCTAAT HRM2_p00640 56935 - 56564 - | putative transcriptional regulator TERM 52 56881 - 56907 + g 87 -4.4 -5.50723 | GCATTAAATTTTCAA CTGCTTGCAATG CTT CAGTGTAATCAG TTTTTGTTTTGATAG HRM2_p00650 57238 - 56945 - | hypothetical protein HRM2_p00660 57869 - 57441 - | putative secreted protein TERM 53 58250 - 58263 + Gr 70 -9.5 -2.88579 | TGTTCACTTTCGTGC CGGGG AATT CCCCG TATCTGCCCCATTAC HRM2_p00670 57851 - 58450 + | hypothetical protein TERM 54 58757 - 58740 - TR 79 -8.4 -4.15044 | opp_overlap 58739 TGCCGGGGTAAGAAA CTGCCG GTGATA CGGCAG GTTAAATTGCATTAG HRM2_p00680 60059 - 58914 - | hypothetical protein TERM 55 60146 - 60180 + r 70 -2.7 -4.9792 | opp_overlap 60168, overlap 60167 60168 GTTGCGTTTCCTTGT GTTTCGCCGCCGA ACGAATTAA TCAGCGGCGCGGC TTTTTGTGTCCGCTG HRM2_p00690 60730 - 60230 - | hypothetical protein TERM 56 60338 - 60355 + g 95 -2.1 -5.87688 | gap 1, opp_overlap 60338 ACCGGGATTATAGCA CTTTACAA TGG TTG-AAAG TTTTTTTTGGGTTGT HRM2_p00700 61138 - 60740 - | hypothetical protein HRM2_p00710 62401 - 61757 - | hypothetical protein TERM 57 62623 - 62651 + r 71 -9.6 -3.06276 | gap 1, opp_overlap 62623 62624, overlap 62622 CATTCAACGTCAAAA TCAGCGG-CGCGT TTTT ATGCGTCCGCTGG ATTTACTTGTTGTGC linF 63475 - 62654 - | LinF; lincosamide nucleotidyltransferase LinF polC 64489 - 63617 - | predicted type III DNA polymerase PolC HRM2_p00740 65882 - 64962 - | hypothetical protein TERM 58 66387 - 66422 + r 100 -16.5 -3.55622 | opp_overlap 66392 CCCTGCTTTTTTCTA TCGAATGCTTAGTTT ATGTCA AAACTAAGCATTCGA TTTAAAACCCTTGCC TERM 59 66417 - 66392 - R 71 -9.2 -3.05384 | opp_overlap 66387 CTTTTTTCTATCGAA TGCTTAGTTT ATGTCA AAACTAAGCA TTCGATTTAAAACCC HRM2_p00750 67328 - 66498 - | putative phosphoesterase HRM2_p00760 68582 - 67605 - | putative ATPase TERM 60 68225 - 68235 + g 82 -6.8 -4.82667 | overlap 68223 ATAGAGCCTTATTCT CCTC TTG GAGG TTTTTAATCTGCTCA