TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.541895 %AT, 1168805 nt, 5839 terms. Intergenic: 0.574667 %AT, H2T: 119098 nt, 716 terms; T2T: 48021 nt, 653 terms; H2H: 56814 nt, 738 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|218883314|ref|NC_011766.1| Desulfurococcus kamchatkensis 1221n, complete genome (length 1365223) DKAM_0001 129 - 251 + | hypothetical protein DKAM_0002 1393 - 248 - | putative dehydrogenase (flavoprotein), FixC DKAM_0003 1761 - 1393 - | S-adenosylmethionine decarboxylase DKAM_0004 2234 - 2470 + | hypothetical protein DKAM_0005 3470 - 2457 - | ABC transporter, membrane component DKAM_0006 4876 - 3470 - | FeS assembly protein SufB DKAM_0007 5617 - 4883 - | FeS assembly ATPase SufC TERM 1 5149 - 5163 + g 70 -2.1 -4.96848 | TTAGAACCCTGGCTT GAAGT ATCTC GCTTC TTTTTCTCTCGCCAC DKAM_0008 5764 - 6753 + | carbamate kinase-like carbamoyl phosphate synthetase DKAM_0009 6913 - 7767 + | Permease of the drug/metabolite transporter (DMT) superfamily DKAM_0010 7888 - 9258 + | amidohydrolase DKAM_0011 9570 - 9280 - | hypothetical protein DKAM_0012 11063 - 9687 - | Phosphomannomutase DKAM_0013 11422 - 11060 - | hypothetical protein DKAM_0014 11520 - 11834 + | hypothetical protein DKAM_0015 12983 - 11871 - | GTP-binding protein DKAM_0016 13764 - 12997 - | Ribonuclease HII TERM 2 13987 - 14006 + H 74 -7 -4.3208 | opp_overlap 13986 AGATAAGCACTTAAT CTCCGCCC TAAA GGACGGGG TTTTCGATTGTAAAA DKAM_0017 14176 - 14526 + | hypothetical protein DKAM_0018 15011 - 14532 - | hypothetical protein DKAM_0019 15957 - 15112 - | hypothetical protein DKAM_0020 16878 - 18230 + | TATA binding protein (TBP)-interacting protein (TIP49-like) DKAM_0021 18256 - 19398 + | Pyridoxal-dependent decarboxylase DKAM_0022 19401 - 20288 + | RIO-like serine/threonine kinase DKAM_0023 20514 - 22481 + | DUF460 domain containing protein DKAM_0024 23748 - 22483 - | S-adenosylmethionine synthetase DKAM_0025 25959 - 23980 - | protein of unknown function DUF814 DKAM_0026 26008 - 26292 + | hypothetical protein DKAM_0027 26289 - 26921 + | Protein of unknown function DUF431 TERM 3 27243 - 27282 + G 73 -10.1 -3.38991 | opp_overlap 27265 27266, overlap 27241 TGATCCACAGGGGGC TCATCGGTGATGCTGAG AAAAGG CTCAGCATTGCTGAAGA TATTGTTAAAAAGAT DKAM_0028 26978 - 27712 + | Translin DKAM_0029 27831 - 28286 + | Putative transcriptional regulator, AsnC family DKAM_0030 29616 - 28297 - | Fe-S oxidoreductase family protein TERM 4 29179 - 29196 + g 71 -9.9 -3.16944 | overlap 29177 29190 TGTGGCTATCACCTT GTCTTCC TCAC GGAAGAC TATTCCCTTGGTGGT DKAM_0031 29730 - 30011 + | hypothetical protein DKAM_0032 30684 - 30001 - | phosphatases-like protein TERM 5 30045 - 30055 + g 80 -6.8 -4.69664 | opp_overlap 30045 GTATCCATTCAATGA CCTC GAA GAGG TTTTTAACTACTATC TERM 6 30767 - 30756 - H 90 -4.4 -5.61881 | TGTTAAAAATAAAAA GCTT ATTT AAGC CGAGAGACTACACAG DKAM_0033 30871 - 31356 + | hypothetical protein DKAM_0034 31384 - 32094 + | TatD-related deoxyribonuclease DKAM_0035 32359 - 32087 - | hypothetical protein TERM 7 32373 - 32391 + r 71 -3 -5.00616 | opp_overlap 32364, overlap 32387 ATTCAACCCCCTATC GGTGGATC AGG GAGGCACC TTTTTTAAAAGAGGG DKAM_0036 33129 - 32416 - | transcriptional regulators-like protein DKAM_0037 33186 - 33302 + | hypothetical protein DKAM_0038 33453 - 33761 + | hypothetical protein DKAM_0039 34820 - 33741 - | Putative translation factor DKAM_0040 34911 - 35699 + | putative circadian clock protein, KaiC DKAM_0041 38140 - 35696 - | predicted P-loop ATPase fused to an acetyltransferase TERM 8 37623 - 37613 - G 74 -6.8 -4.21631 | AACCCATTTAATAAA CACG TGA CGTG GCTCAGGGTATTGGG TERM 9 38216 - 38202 - R 71 -4.2 -4.78107 | opp_overlap 38211 GAGTACGAGTAAAAA CTAGCC GTA GGGTAG TGAAACCCTTCTAAA DKAM_0042 40442 - 38202 - | Cell division control protein 48, AAA family TERM 10 39424 - 39406 - G 73 -11 -2.71791 | opp_overlap 39416, overlap 39405 ATTTCCCTGTCAAAT CTCCCAGG TCT CCTGAGAG CGGGATCTAATGCAT TERM 11 39788 - 39815 + g 100 -13.6 -4.11692 | gap 1 CCTTAGGCGGCTCTA TACCCAGATGCTC GAA GAGC-TCTGGGTA TTTTAAAGGTAGCTC DKAM_0043 40502 - 41284 + | putative circadian clock protein, KaiC DKAM_0044 41716 - 41381 - | hypothetical protein TERM 12 41636 - 41661 + g 82 -11.3 -3.59649 | ACTGGTTGAGAGCTC CACTGCTTTAA CCGC TTGAAGCAGTG TTTCAGCAATTATTT TERM 13 42823 - 42838 + G 78 -6.1 -4.66938 | opp_overlap 42822, overlap 42807 TGGCGCGGTAGTAAT GCCTG CCTCAC CAGGC TTTTATATTAAGCCT DKAM_0045 42362 - 42949 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DKAM_0046 43494 - 43051 - | hypothetical protein DKAM_0047 44003 - 43707 - | tRNA-splicing endonuclease DKAM_0048 44959 - 44255 - | putative phosphate transport regulator TERM 14 45775 - 45788 + G 72 -5.2 -4.66953 | TGCCCAGCCAATATC CCGC CTGGTT GCGG TTTTTGCAGTGTTCC DKAM_0049 45058 - 46692 + | radical SAM domain protein DKAM_0050 47041 - 46667 - | hypothetical protein DKAM_0051 47432 - 47055 - | hypothetical protein DKAM_0052 49240 - 47489 - | Glycyl-tRNA synthetase TERM 15 48047 - 48057 + g 74 -6.8 -4.3739 | opp_overlap 48046, overlap 48047 CAGCTCTCTATAGAT CTCC TCA GGAG TTTTCTGAGCGAGTC TERM 16 49612 - 49629 + G 73 -7.7 -4.15044 | gap 1, overlap 49612 49615 GGCTTGGAGGGAGTA CC-AGGGG ATA CCCCTCGG TTTCTTAGGAGGGGA DKAM_0053 49298 - 50176 + | Agmatinase DKAM_0054 50574 - 50425 - | DNA-directed RNA polymerase subunit P DKAM_0055 50672 - 50989 + | translation initiation factor 1 (eIF-1/SUI1) DKAM_0056 52071 - 51112 - | Transcription initiation factor IIB (TFIIB) DKAM_0057 54489 - 52897 - | CTP synthase DKAM_0058 54550 - 55101 + | Phosphoribosyltransferase DKAM_0059 55840 - 55133 - | Threonyl/alanyl tRNA synthetase TERM 17 55471 - 55491 + g 74 -11.1 -2.80338 | overlap 55469 55473 CATCGTACCCGTATT CAGGCGTGA TGT TCCCGCCTG TGATTAATGCATTGT TERM 18 55920 - 55933 + r 81 -9.5 -3.75665 | GGGCGGGGATTCGAA CCCCG GTCA CGGGG TTTCCTCCCGTGTGG TERM 19 56139 - 56160 + r 100 -13.7 -3.62775 | AGACGTCCAACCTCC TTCCCGCCC TTTA GGGCGGGGA TTCTTGCAGGGTGGT DKAM_0060 56315 - 56184 - | hypothetical protein DKAM_0061 56606 - 57166 + | hypothetical protein DKAM_0062 57263 - 57144 - | hypothetical protein DKAM_0063 58074 - 57466 - | Phosphate transport system protein PhoU DKAM_0064 58854 - 58075 - | Phosphate import ATP-binding protein pstB DKAM_0065 59675 - 58827 - | phosphate ABC transporter, inner membrane subunit PstA DKAM_0066 60270 - 59668 - | phosphate ABC transporter, inner membrane subunit PstC DKAM_0067 60323 - 60460 + | hypothetical protein DKAM_0068 61693 - 60569 - | Phosphate ABC transporter, phosphate binding protein DKAM_0069 61825 - 62841 + | phosphate uptake regulator, PhoU DKAM_0070 64917 - 62821 - | Ferrous iron transport protein B DKAM_0071 65140 - 64904 - | FeoA family protein DKAM_0072 65573 - 66220 + | hypothetical protein DKAM_0073 66238 - 66966 + | heavy-metal cation transporter, ZIP family DKAM_0074 67240 - 66968 - | hypothetical protein DKAM_0075 68023 - 67247 - | Lipoate-protein ligase a TERM 20 67480 - 67468 - G 71 -7.7 -3.86346 | TCACTCCCTTAGAAA CCAGT TTA ACTGG GGGAGCTTTCAACAC DKAM_0076 68035 - 69015 + | Biotin synthase related protein DKAM_0077 69072 - 69869 + | Biotin synthase-related protein DKAM_0078 70364 - 70504 + | hypothetical protein DKAM_0079 70588 - 71253 + | hypothetical protein DKAM_0080 71271 - 72440 + | hypothetical protein DKAM_0081 72421 - 73113 + | hypothetical protein DKAM_0082 73131 - 75182 + | hypothetical protein TERM 21 75367 - 75383 + G 79 -10.1 -3.71213 | AAGAGAGCTCTTCTA TGGGGGC TTA GCTCCCA TTTCACATTATATAT DKAM_0083 75305 - 75430 + | hypothetical protein DKAM_0084 77043 - 77534 + | hypothetical protein DKAM_0085 77550 - 78581 + | hypothetical protein TERM 22 78769 - 78807 + F 75 -10.3 -2.78384 | gap 1 ATGACGTCAACAACT CTCCGTGCGGGATTGAAG CCGT CTTCGGGCCC-CACGGGG TCTCGTCCAGCCACC DKAM_0086 78954 - 79127 + | hypothetical protein DKAM_0087 79249 - 79124 - | hypothetical protein DKAM_0088 79733 - 79341 - | transcriptional regulator, XRE family DKAM_0089 80121 - 79735 - | putative PAS/PAC sensor protein TERM 23 80230 - 80240 + r 88 -6.8 -5.08367 | opp_overlap 80229, overlap 80232 CCCTAGAATACAAGC GACG AAG CGTC TTTTTGCTTTGTGTT DKAM_0090 81677 - 80358 - | hypothetical protein DKAM_0091 82005 - 82124 + | hypothetical protein DKAM_0092 82478 - 82323 - | hypothetical protein DKAM_0093 82613 - 82726 + | hypothetical protein DKAM_0094 83186 - 82905 - | Small nuclear ribonucleoprotein, LSM family DKAM_0095 83875 - 83276 - | Putative methyltransferase DKAM_0096 84231 - 83989 - | protein of unknown function DUF91 DKAM_0097 84250 - 85101 + | glycosyl transferase, conjectural TERM 24 85095 - 85077 - f 76 -10.2 -2.92102 | opp_overlap 85091, overlap 85076 AGAGCTCGTAGAAAG GGCCAGGG CCG CCCTGGGC AAGTAGCCCCCTTTA DKAM_0098 85223 - 85570 + | major facilitator superfamily MFS_1 protein DKAM_0099 86014 - 86823 + | Ferredoxin:NADP oxidoreductase, beta subunit TERM 25 87116 - 87102 - g 73 -11.4 -2.57132 | opp_overlap 87090, overlap 87101 CTTCCCCTCCATAAC GGGCAG GGT CTGCCC CCAGGAGTGGTTCTG DKAM_0100 86839 - 88251 + | Ferredoxin:NADP oxidoreductase, alpha subunit DKAM_0101 88761 - 88243 - | hypothetical protein TERM 26 88977 - 88931 - R 93 -12.3 -3.18264 | gap 2, overlap 88933 GCTCCCATCTACGAA GAGCCCTGCGGGGC--TTGGAGC AGT GCTCCCACCGCCCCGCAGGCTTC AACAACCTCTCCAAC TERM 27 88974 - 88933 - R 93 -12.4 -3.1552 | gap 3, overlap 88931 TCCCATCTACGAAGA GCCCTGCGGGGC--TTGGAGC AGT GCTCCCACCGCCCCGCAGG-C TTCAACAACCTCTCC DKAM_0102 89335 - 89069 - | Indolepyruvate oxidoreductase subunit iorB DKAM_0103 89680 - 89339 - | indolepyruvate oxidoreductase subunit iorB DKAM_0104 90114 - 89677 - | indolepyruvate ferredoxin oxidoreductase, alpha subunit TERM 28 90504 - 90490 - g 80 -7.2 -4.56597 | TCCCGCCTCGAAAAA TTCATC CAG GATGAA ATCAATAAAGGCTTG TERM 29 90548 - 90514 - g 70 -4.9 -4.41302 | gap 1, overlap 90515 GATGAAATCAATAAA GGCTTGGCACCCCTTG AAAA CATGAGGCGCC-AGCT GGCTGAGCTGATTCA TERM 30 90815 - 90800 - g 72 -9 -3.62476 | opp_overlap 90800 90799 TAAGCAAGGAGAGAA TCGCTG TCGA CAGCGA GTTTTGGAATGAGTT DKAM_0105 90292 - 90999 + | CopG domain protein DNA-binding domain protein DKAM_0106 91016 - 92104 + | exonuclease of the beta-lactamase fold involved in RNA processing-like protein DKAM_0107 92131 - 93243 + | Glycosyltransferase DKAM_0108 94037 - 93342 - | cobalt transport protein DKAM_0109 95440 - 94037 - | ABC transporter related DKAM_0110 96782 - 95535 - | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I DKAM_0111 97902 - 96775 - | Nucleotidyl transferase TERM 31 97431 - 97446 + g 71 -7.6 -3.92869 | opp_overlap 97426 97431 TATTCAGCAAGTATA CCTCTA TGGA TAGAGG TTTCTCAATGAATAA DKAM_0112 98069 - 98662 + | Phospholipase D-related protein DKAM_0113 98800 - 100248 + | Citrate transporter DKAM_0114 101508 - 100294 - | IS element ISDka1 orfB, putative transposase DKAM_0115 102220 - 101576 - | IS element ISDka1 orfA, putative resolvase DKAM_0116 102847 - 102257 - | protein of unknown function DUF84 DKAM_0117 103212 - 104285 + | aspartate/ornithine carbamoyltransferase TERM 32 104652 - 104640 - T 74 -4.1 -5.03945 | overlap 104641 CAACAACTATAAAAA CCTAC TAA GTAGA TCCAGGAATAAACCC DKAM_0118 104867 - 104688 - | hypothetical protein TERM 33 105031 - 105052 + G 85 -12.3 -3.32844 | opp_overlap 105002 105027 105029 TGCATATAGGATAGG CCTCAGCCT CGGC AGGCTGGGG TTGTCGGATACCAGC TERM 34 105953 - 105971 + G 76 -8.9 -3.75598 | ACATGGGTTGATGGA GTAAGGC AGGCA GCCTTAC TTGTTAAATTAATTA TERM 35 106328 - 106308 - g 74 -5.5 -4.68384 | opp_overlap 106324 AGTTAGTTAAGAAAA TAGCATCTC TGA AAAATGCTA GGGTGGCATCTATTA DKAM_0119 104984 - 106354 + | Phospho-sugar mutase DKAM_0120 107144 - 106368 - | hypothetical protein TERM 36 106500 - 106487 - G 72 -8.1 -3.67967 | TATATAGATATAGAA GAGGC CCAT GCCTC GAGACCTGATTGATA TERM 37 106850 - 106832 - G 79 -11 -3.42583 | overlap 106825 106823 TTAAGATAGGGATAA GCCATCCC CTA AGGATGGC AGCAGCATCCTGGCC DKAM_0121 107218 - 108870 + | hypothetical protein DKAM_0122 110371 - 109085 - | thiamine biosynthesis protein ThiC TERM 38 109436 - 109456 + g 85 -13.9 -2.96216 | ATGAGCAGCAGCTAT GGCGCCGCC TAT GGCGGCGGC TATATGGTCGTAGCC DKAM_0123 110861 - 110379 - | putative 4Fe-4S ferredoxin protein TERM 39 110912 - 110924 + H 74 -6.3 -4.45386 | opp_overlap 110912 TCCCTTGACATATTA TAGGT ATC ACCTA TTTATTAATTTATTG DKAM_0124 111196 - 112542 + | 4-aminobutyrate aminotransferase DKAM_0125 114028 - 112553 - | histone acetyltransferase, ELP3 family DKAM_0126 114100 - 115311 + | Protein of unknown function (DUF763) DKAM_0127 116486 - 115308 - | iron-containing alcohol dehydrogenase DKAM_0128 117624 - 116515 - | egghead protein-like protein DKAM_0129 118676 - 117738 - | hypothetical protein TERM 40 118379 - 118325 - G 71 -9.7 -3.22884 | gap 1, opp_overlap 118337 118339 118341 TTATCAATGTATCAA TGTGTTTATGTATATAGCTTATAACC TGGG GGTTA-AAGCTATATACTTCAACATA CCCATTGTTAAGTTC DKAM_0130 119317 - 118895 - | hypothetical protein DKAM_0131 120351 - 119401 - | mevalonate kinase DKAM_0132 120423 - 121274 + | MRP protein-like protein DKAM_0133 121529 - 121386 - | hypothetical protein DKAM_0134 121676 - 122392 + | hypothetical protein DKAM_0135 122955 - 122419 - | hypothetical protein DKAM_0136 125475 - 123019 - | Oligosaccharyl transferase subunit, putative TERM 41 123293 - 123269 - G 74 -10.7 -3.14344 | opp_overlap 123266, overlap 123233 123273 GATGCTGTTGACGAA TCAAGGAGTCC CTG GGACCCCGTGA ACCATTTAAATGTAT TERM 42 123289 - 123273 - G 73 -10.1 -3.39895 | opp_overlap 123266, overlap 123233 123269 CTGTTGACGAATCAA GGAGTCC CTG GGACCCC GTGAACCATTTAAAT DKAM_0137 126497 - 125553 - | ornithine carbamoyltransferase TERM 43 126082 - 126111 + g 100 -13.7 -4.24342 | ACATCGCTTAGTGCT TGGGCTGGGTGAT GTAG ATCACTTAGCCCA TTTATTACTGGGACC DKAM_0138 126566 - 127621 + | protein of unknown function DUF711 DKAM_0139 128023 - 127748 - | Protein of unknown function UPF0147 DKAM_0140 128115 - 128477 + | Uncharacterized Zn-finger containing protein DKAM_0141 129104 - 128484 - | thymidylate kinase DKAM_0142 129480 - 129094 - | putative aconitase, subunit DKAM_0143 130657 - 129488 - | Putative aconitase subunit 1 DKAM_0144 131937 - 130657 - | UbiD family decarboxylase TERM 44 131536 - 131522 - G 72 -8.6 -3.6608 | opp_overlap 131522 131521 ATGACTCTATGGAAA CTACTG TTA CAGTAG GTTTCATAGCATGCT DKAM_0145 133134 - 131941 - | putative GTPase or GTP-binding protein DKAM_0146 133831 - 133187 - | hypothetical protein DKAM_0147 133882 - 134502 + | AAA ATPase DKAM_0148 134493 - 135005 + | protein of unknown function DUF46 DKAM_0149 136232 - 135009 - | SufBD protein DKAM_0150 136956 - 136225 - | ABC transporter related protein DKAM_0151 139652 - 136992 - | Putative ATP-dependent helicase DKAM_0152 141099 - 139687 - | glycosyl transferase, family 2 DKAM_0153 141156 - 141806 + | Zn-dependent hydrolase of the beta-lactamase fold-like protein DKAM_0154 141820 - 142047 + | hypothetical protein DKAM_0155 142059 - 142343 + | hypothetical protein DKAM_0156 142745 - 142921 + | hypothetical protein DKAM_0157 144455 - 144087 - | hypothetical protein TERM 45 144663 - 144682 + H 73 -5.6 -4.41206 | overlap 144665 TGTGTCTGACCTCCT CACTGCCC TTTA GGGTAGGG TTTTGTGGGGTGGTT DKAM_0158 144911 - 146440 + | AMP phosphorylase DKAM_0159 146530 - 147900 + | geranylgeranyl reductase DKAM_0160 147894 - 148439 + | protein of unknown function DUF429 DKAM_0161 149458 - 148436 - | phosphoesterase, DHHA1 TERM 46 148753 - 148767 + g 76 -4.3 -4.95758 | overlap 148744 148765 ATGCCCTGAAACCAT TCATC TCTCT GATGA TTTTTCTAATATCAT DKAM_0162 149480 - 150298 + | hypothetical protein DKAM_0163 152030 - 150330 - | type II secretion system protein E TERM 47 152783 - 152814 + G 77 -11 -3.17212 | gap 1, opp_overlap 152782 GCTCTTCAACGAGAT GCTTGTCGGC-ATGA AAA TTATTGCCGACAGGC TTGGTGGGCTCCTCG DKAM_0164 152250 - 153938 + | type II secretion system protein DKAM_0165 153938 - 154702 + | hypothetical protein DKAM_0166 154843 - 155616 + | hypothetical protein DKAM_0167 155603 - 158239 + | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein DKAM_0168 158236 - 159339 + | hypothetical protein TERM 48 159643 - 159668 + G 76 -11.9 -2.74322 | opp_overlap 159636 159643, overlap 159642 GCGTAGAATCAAGGA GTGGCTCAGGG TACA CCTTGAGCTAC GTTTACAGCATTGGC DKAM_0169 159321 - 159731 + | hypothetical protein DKAM_0170 159731 - 161023 + | hypothetical protein DKAM_0171 161788 - 161372 - | hypothetical protein DKAM_0172 163275 - 161800 - | hypothetical protein DKAM_0173 164266 - 163280 - | hypothetical protein DKAM_0174 165270 - 164269 - | hypothetical protein TERM 49 165222 - 165205 - G 73 -11.3 -2.75343 | opp_overlap 165175, overlap 165204 CTCATATGGGTAAAC CCAGAGG AGAT CCTCTGG CCCTGAATTAACCCA DKAM_0175 165776 - 165267 - | hypothetical protein DKAM_0177 166550 - 166131 - | hypothetical protein DKAM_0178 166931 - 166560 - | hypothetical protein DKAM_0179 167304 - 166942 - | hypothetical protein DKAM_0180 167455 - 168333 + | hypothetical protein DKAM_0181 168359 - 169531 + | AAA family ATPase TERM 50 169578 - 169536 - f 100 -12.1 -3.9392 | opp_overlap 169567 GTGCACTCTAAAGAA CCGGGTACCCGGTGA CCAATTTATAGTT TAACCGGGTACCCGG TATCCCGGTTTTCAC TERM 51 169567 - 169586 + F 79 -8.6 -4.13728 | gap 1, opp_overlap 169536 CAATTTATAGTTTAA CCGGG-TAC CCG GTATCCCGG TTTTCACACTCTATA DKAM_0182 170109 - 170306 + | hypothetical protein TERM 52 170456 - 170471 + F 74 -4.7 -4.87291 | overlap 170447 TTATGTCTCTCTCCG TCCTG GGGGAG CAGGA TTTTTAGTTGCAATG TERM 53 171303 - 171344 + G 85 -13.9 -3.03159 | opp_overlap 171331, overlap 171312 ACTCGCATTGGCAGT TGTCTCACAGGTAGCTTTG AATA CAAAGCTACCTGTGATAGG TGTTGGAGGGATTAG TERM 54 171312 - 171335 + G 84 -14 -2.82987 | opp_overlap 171331, overlap 171303 GGCAGTTGTCTCACA GGTAGCTTTG AATA CAAAGCTACC TGTGATAGGTGTTGG DKAM_0183 170536 - 171759 + | dihydroorotate dehydrogenase family protein DKAM_0184 171877 - 173160 + | phosphoglycerate kinase DKAM_0185 173154 - 174215 + | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) DKAM_0186 174220 - 174645 + | UspA domain protein DKAM_0187 176164 - 174632 - | glycosyl transferase TERM 55 175918 - 175939 + g 72 -5.1 -4.57073 | opp_overlap 175922 TCCTAAGAGTTACTA CGAACTCCT CCTC AGGGGTTAG TTTTTCAAGGAACTC TERM 56 176494 - 176453 - g 100 -11.7 -4.40358 | gap 1, opp_overlap 176453 AGCGATTCCAGAAAA GGATTCATCGACACCCC-TG TTT CATGGGATATCGACGAAGCC TTTCTACAATTCAAA TERM 57 177264 - 177248 - g 75 -9.5 -3.55761 | opp_overlap 177237 TATCTAGCTGTGAAA GCTGTAT TTG ATACAGC ACAGTCATTCGGAGG DKAM_0188 176255 - 177892 + | aminopeptidases-like protein DKAM_0189 177898 - 179571 + | phenylalanyl-tRNA synthetase subunit beta DKAM_0190 180789 - 179629 - | Putative Na+/H+ antiporter DKAM_0191 181817 - 180861 - | Protein of unknown function (DUF1210) DKAM_0192 182327 - 181995 - | transcriptional regulator-like protein DKAM_0193 182445 - 182314 - | hypothetical protein DKAM_0194 182747 - 182463 - | methylated-DNA--protein-cysteine methyltransferase TERM 58 182935 - 182981 + H 70 -7.1 -3.85698 | overlap 182936 ACTTGCTTCACCTAG ACTGCATGGGGCTCGGTCGAG CCCAA CGCCACGGAGCCCCATCCGGG TTTCTAGCACGGCCC TERM 59 182936 - 182980 + H 76 -10.6 -2.91276 | overlap 182935 CTTGCTTCACCTAGA CTGCATGGGGCTCGGTCGAG CCCAA CGCCACGGAGCCCCATCCGG GTTTCTAGCACGGCC TERM 60 183805 - 183781 - g 85 -12.2 -3.33711 | opp_overlap 183777, overlap 183776 183784 CAGGTAGAAAGCCAA GAAGGATGGG TAGCG CCCATCCCTC CATGGTGCCTTACCA TERM 61 183802 - 183784 - g 83 -10.3 -3.80019 | opp_overlap 183777, overlap 183781 183776 GTAGAAAGCCAAGAA GGATGGG TAGCG CCCATCC CTCCATGGTGCCTTA DKAM_0195 183135 - 184313 + | formyl-CoA transferase TERM 62 184606 - 184596 - g 80 -6.8 -4.69664 | opp_overlap 184595, overlap 184597 184605 TACATTAGGGAAAAA CCTC TAA GAGG ATCTCTAACAGTAAC TERM 63 185310 - 185333 + G 72 -10.4 -2.79023 | opp_overlap 185308 185310, overlap 185307 GGAGGAGATACAACA TTCTTCATCG TCTC CGATGGAGAA TCATTGATCGGATTC DKAM_0196 184323 - 185831 + | gamma-glutamyltranspeptidase DKAM_0197 186725 - 185841 - | GhmP kinase putative ATP-binding protein DKAM_0198 187381 - 186758 - | Protein of unknown function (DUF447) DKAM_0199 188570 - 187368 - | Protein of unknown function (DUF1464) TERM 64 187701 - 187682 - G 71 -10.8 -2.73542 | overlap 187684 TGTAATCCTTAACGA CAGGGTTT CTTG AAACCCTG CCTGATAACAGTATC DKAM_0200 190065 - 188653 - | MATE efflux family protein DKAM_0201 190809 - 190081 - | Predicted hydrolase (HAD superfamily) DKAM_0202 191310 - 190816 - | molybdenum cofactor synthesis domain protein DKAM_0203 191722 - 192516 + | hypothetical protein TERM 65 192678 - 192639 - T 70 -5.6 -4.32607 | overlap 192641 192648 192651 CTAAAAGCTAAGAAA GAGGGAAAACCACTGTCA TTCA TGACAGGAGTTAACCCGC CGGGGTATAGGAAGA TERM 66 193673 - 193650 - T 74 -10.2 -2.65354 | CCTACCCTAAAGGGA CCCCTCGCTC TTTA GGGCGAGGAG GAGGTCAGATAATTT DKAM_0206 194455 - 193697 - | AAA ATPase TERM 67 194474 - 194498 + H 78 -7.3 -4.44448 | overlap 194462 TAGTGCCCCCGGTTT TATTTAATCCC AGG GGCATTAAATA TTTATTTCCGGTAGT DKAM_0207 194578 - 196047 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase DKAM_0208 196044 - 196526 + | 4Fe-4S ferredoxin, iron-sulfur binding domain protein DKAM_0209 196526 - 196810 + | BFD domain protein (2Fe-2S)-binding domain protein TERM 68 197899 - 197877 - g 85 -12.2 -3.31263 | ACCGGAGTTTGAGAA TCTTAAACCT GAT AGGTTTAAGA AGGGGAAGTTAATAA DKAM_0210 196807 - 197937 + | FAD dependent oxidoreductase DKAM_0211 198421 - 197945 - | MoaD family protein DKAM_0212 198659 - 198423 - | MoaD family protein DKAM_0213 199090 - 198662 - | molybdenum cofactor biosynthesis protein C DKAM_0214 200022 - 199108 - | Probable molybdenum cofactor biosynthesis protein A DKAM_0215 201134 - 200025 - | glycine betaine/carnitine/choline transport ATP-binding protein TERM 69 200306 - 200326 + g 71 -3.3 -4.84914 | opp_overlap 200306 CATCTATGCAGGAAC TAGCGTATG TAT TATACCCTA TTTTCTTCTCTACCT DKAM_0216 201903 - 201127 - | molybdate ABC transporter, permease protein ModB DKAM_0217 202772 - 201900 - | molybdenum ABC transporter, periplasmic molybdate-binding protein DKAM_0218 203777 - 202779 - | molybdopterin binding domain protein DKAM_0219 203914 - 204822 + | protein of unknown function DUF89 DKAM_0220 205508 - 205068 - | predicted transcription regulator, ArsR family DKAM_0221 206021 - 205551 - | hypothetical protein DKAM_0222 206702 - 206097 - | putative 6-phospho-3-hexuloisomerase TERM 70 206133 - 206147 + g 71 -7.8 -3.98083 | ATTTCTTAATTCTTC CTCGGT GAC GCCGAG TTTATCCATTAGCTC TERM 71 207097 - 207071 - H 93 -12.3 -2.92192 | opp_overlap 207070 207069, overlap 207066 GTCCATTTAAGTACA GCCTGCACCCT TACAC AGGGTGCAGCC ACTTCTGTCTTTACT DKAM_0223 207202 - 207897 + | radical SAM domain protein DKAM_0224 207897 - 208445 + | ZPR1-related zinc finger protein DKAM_0225 209545 - 208442 - | peptidase M29, aminopeptidase II DKAM_0226 209604 - 210089 + | ferritin, Dps family protein DKAM_0227 210147 - 211109 + | triphosphoribosyl-dephospho-CoA protein DKAM_0228 212043 - 211096 - | oxidoreductase, molybdopterin binding TERM 72 211512 - 211530 + g 72 -5.3 -4.58395 | overlap 211513 GTTCATAGAGGTCTT TCAGTGA CAGGC TCACTGG TTTTTCAACGCTCCC TERM 73 212207 - 212188 - g 79 -7.8 -4.38712 | overlap 212190 GTGAGGTGGATAAAA CACGGGTT GAAA AACCCGAG GATGTGGTGTGGAGT TERM 74 212205 - 212190 - g 76 -9 -3.80133 | overlap 212188 GAGGTGGATAAAACA CGGGTT GAAA AACCCG AGGATGTGGTGTGGA DKAM_0229 212088 - 212462 + | hypothetical protein DKAM_0230 213588 - 212524 - | aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain protein DKAM_0231 213697 - 215316 + | extracellular solute-binding protein, family 5 DKAM_0232 215324 - 216346 + | binding-protein-dependent transport systems inner membrane component DKAM_0233 216343 - 217239 + | binding-protein-dependent transport systems inner membrane component DKAM_0234 217221 - 218195 + | oligopeptide/dipeptide ABC transporter, ATPase subunit DKAM_0235 218185 - 218958 + | ABC transporter related DKAM_0236 219170 - 218961 - | hypothetical protein TERM 75 219194 - 219184 - H 73 -8.2 -3.65529 | ACACGGGTACCCAAA GCCC TGT GGGC GAGGCGGAAGTCCCT DKAM_0237 219610 - 221172 + | pheS; phenylalanyl-tRNA synthetase subunit alpha DKAM_0238 221190 - 222122 + | Radical SAM domain protein DKAM_0239 222301 - 222786 + | protein of unknown function DUF988 DKAM_0240 222783 - 223505 + | ABC transporter related DKAM_0241 223489 - 224064 + | hypothetical protein DKAM_0242 225966 - 224146 - | adenine deaminase DKAM_0243 226040 - 227455 + | amidohydrolase DKAM_0244 227732 - 227914 + | hypothetical protein TERM 76 227953 - 227943 - T 73 -2.6 -5.1963 | opp_overlap 227943, overlap 227937 TCTAAGGAATAAAAA TAAA TTA TTTA TTTTTTAATTACCGT TERM 77 227943 - 227953 + T 76 -2.6 -5.27477 | opp_overlap 227943 227937 TCTAAGGAATAAAAA TAAA TTA TTTA TTTTTTAATTACCGT DKAM_0245 229267 - 227993 - | cysteine desulfurase, SufS subfamily DKAM_0246 230760 - 229471 - | IS element ISDka1 orfB, putative transposase TERM 78 229655 - 229609 - G 100 -18.1 -3.18264 | gap 2, opp_overlap 229611 229634, overlap 229611 GCTCCCATCTACGAA GAGCCCTGCGGGGC--TTGGAGC GGC GCTCCCACCGCCCCGCAGGGCTT TGAGGAGTAGGTTCC TERM 79 229653 - 229611 - G 100 -20.7 -3.1552 | gap 2, opp_overlap 229611 229634, overlap 229609 TCCCATCTACGAAGA GCCCTGCGGGGC--TTGGAGC GGC GCTCCCACCGCCCCGCAGGGC TTTGAGGAGTAGGTT TERM 80 229611 - 229653 + g 100 -20.7 -3.5594 | gap 2, opp_overlap 229609 229611, overlap 229634 TCCCATCTACGAAGA GCCCTGCGGGGC--TTGGAGC GGC GCTCCCACCGCCCCGCAGGGC TTTGAGGAGTAGGTT DKAM_0247 231397 - 230753 - | IS element ISDka1 orfA, putative resolvase DKAM_0248 231588 - 231412 - | hypothetical protein DKAM_0249 231795 - 231589 - | hypothetical protein DKAM_0250 232142 - 231795 - | hypothetical protein DKAM_0251 232609 - 233130 + | hypothetical protein DKAM_0252 233539 - 233141 - | putative signal-transduction protein with CBS domain DKAM_0253 233729 - 234922 + | glycoside hydrolase, family 1 DKAM_0254 235282 - 234929 - | alkylhydroperoxidase like protein, AhpD family TERM 81 235004 - 234988 - G 71 -10.8 -2.71322 | overlap 234985 TCAAGGCATACATGA GGGCGG GCCCG CCGCCC ATGCATACAGCTACC DKAM_0255 236143 - 235343 - | hypothetical protein DKAM_0256 236952 - 236140 - | ABC-2 type transporter DKAM_0257 237943 - 236936 - | ABC transporter related DKAM_0258 239574 - 238597 - | galactose-1-phosphate uridylyltransferase DKAM_0259 240903 - 239581 - | GHMP kinase DKAM_0260 240912 - 241907 + | NAD-dependent epimerase/dehydratase DKAM_0261 241959 - 242102 + | hypothetical protein DKAM_0262 243250 - 242108 - | mgtE-like divalent cation transporter TERM 82 242568 - 242558 - G 85 -6.8 -5.0133 | opp_overlap 242558, overlap 242559 GATGGCTGCAAAAAA GCCT CCC AGGC TGCTTCCCGAGGAAG DKAM_0263 243335 - 244543 + | TrkA-C domain protein DKAM_0264 244639 - 245091 + | hypothetical protein DKAM_0265 245523 - 245248 - | hypothetical protein DKAM_0266 245695 - 246150 + | hypothetical protein DKAM_0267 246850 - 246140 - | hypothetical protein DKAM_0268 247800 - 246847 - | ABC transporter related DKAM_0269 248284 - 247820 - | Putative ABC transporter ATP-binding protein DKAM_0270 248972 - 248277 - | membrane protein-like protein TERM 83 249042 - 249021 - g 73 -9.5 -3.41051 | overlap 249024 CGAGGCGCAGTATAA GAAGGTTCA AGCC TGAACCTCC GCCAAGAGACCTGGT TERM 84 249039 - 249024 - g 71 -7.6 -3.84406 | overlap 249021 GGCGCAGTATAAGAA GGTTCA AGCC TGAACC TCCGCCAAGAGACCT DKAM_0271 248975 - 249496 + | nitroreductase DKAM_0272 250836 - 249493 - | Rhomboid family protein TERM 85 250234 - 250212 - G 83 -13.4 -3.27498 | TATATGTCAGAGCAA TGCCGGCGAC GAA GCCGCCGACA TGAGCGAAGTAAGCA DKAM_0273 251150 - 253213 + | pullulanase DKAM_0274 254102 - 253224 - | putative cation efflux system protein DKAM_0275 254862 - 254278 - | transcription factor - TATA-box-binding protein DKAM_0276 256619 - 254940 - | membrane protein-like protein TERM 86 255887 - 255907 + g 80 -12.6 -3.03124 | ACTTCTTTAATTCGC CGGGTAGC TCACT GCTACCCG TGTTCGAGAATGGGC DKAM_0277 257190 - 256624 - | PMT multi-domain protein DKAM_0278 257988 - 257221 - | hypothetical protein DKAM_0279 259857 - 258025 - | ATP-dependent DNA ligase TERM 87 258722 - 258741 + g 82 -11.4 -3.58365 | ATCTCCAATAGTTTA CCCCTCCT AACT GGGAGGGG TTCTATGGTATAGTC TERM 88 259387 - 259397 + g 74 -6.8 -4.20148 | CTCTCTGAGGAGCCC GGCT AAA AGCC TTATTTTCAGATCCT TERM 89 259952 - 259942 - H 70 -5.4 -4.41348 | CCCTGTTGAAATAAA CCAT AAT ATGG TGATGACAACCCGGC DKAM_0280 259991 - 261829 + | serine proteases-like protein DKAM_0281 262457 - 261807 - | predicted Uracil-DNA glycosylase DKAM_0282 262539 - 263288 + | GtrA family protein DKAM_0283 263285 - 263533 + | hypothetical protein TERM 90 263515 - 263528 + F 70 -8.1 -3.5882 | opp_overlap 263515 263514 CCAGCCGGTTAGAAG CCTCG TCAA CGAGG TTTAGGGGTAATGTG DKAM_0284 263539 - 263832 + | hypothetical protein DKAM_0285 265340 - 263847 - | predicted calcium-binding protein TERM 91 266732 - 266696 - g 78 -11.6 -3.01712 | opp_overlap 266706 CTTGGTGTGGGAAGA CCCTAATGCACCAGTG GTTGA CACGGGTGTATCAGGG ATAAGAAACGACCCT TERM 92 267457 - 267444 - g 76 -8.1 -4.15841 | CTATTAAAGGATAAA CCGGT GAGC ACCGG TCCATACTACGTAGC DKAM_0286 265425 - 267566 + | extracellular solute-binding protein, family 5 DKAM_0287 267624 - 268682 + | binding-protein-dependent transport systems inner membrane component TERM 93 268962 - 268993 + G 71 -10.2 -2.60244 | gap 1, overlap 268965 GATCTAAAACTACTA CCCCCATGTATCCCA CCA TGGTGTAC-TGGGGG TCCATTACTTGGAAC DKAM_0288 268686 - 269792 + | binding-protein-dependent transport systems inner membrane component DKAM_0289 269789 - 270784 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 94 271325 - 271308 - g 72 -8.5 -3.71649 | CTCTTAAAGCCTAAA TTCATCG TTCT CGATGAA CCTACCTCCGCTCTA DKAM_0290 270792 - 271757 + | oligopeptide/dipeptide ABC transporter, ATPase subunit DKAM_0291 271856 - 271978 + | hypothetical protein DKAM_0292 272267 - 272121 - | magnesium-dependent phosphatase-1 TERM 95 272275 - 272289 + H 100 -8.6 -5.05782 | TGATCCATTCATGTC CACTGT TTA ACAGTG TTTTTTAAAATGCAT DKAM_0293 272348 - 273547 + | major facilitator superfamily MFS_1 TERM 96 273549 - 273560 + F 93 -2.2 -6.09888 | AGAAAATAGTTTAAG CAGG CCCA CTTG TTTTTTTTATTAACC DKAM_0294 273622 - 273885 + | Protein of unknown function DUF131 DKAM_0295 273920 - 274174 + | Protein of unknown function DUF131 DKAM_0296 275676 - 274306 - | dihydrolipoamide dehydrogenase DKAM_0297 277238 - 275673 - | glycine dehydrogenase subunit 2 TERM 97 276686 - 276664 - G 75 -9.8 -3.62591 | opp_overlap 276664 276663 TCTATAACTCTGAAA CCAGCCATCG CCG CGCTAGCTGG GTTTGTTCCATGCGC DKAM_0298 278656 - 277238 - | glycine dehydrogenase subunit 1 DKAM_0299 278756 - 279865 + | glycine cleavage system aminomethyltransferase T DKAM_0300 279917 - 281263 + | Glycine/serine hydroxymethyltransferase DKAM_0301 281288 - 281728 + | glycine cleavage system protein H DKAM_0302 281754 - 282491 + | deoxyribose-phosphate aldolase DKAM_0303 282493 - 283353 + | Spermine synthase DKAM_0304 284262 - 283390 - | hypothetical protein DKAM_0305 284785 - 284255 - | hypothetical protein DKAM_0306 284979 - 285740 + | Predicted DNA methylase DKAM_0307 285740 - 285976 + | hypothetical protein TERM 98 286055 - 286074 + F 71 -9.3 -3.06696 | ACATGTTTTAGGTCC TGCGGTG GCACCA CACCGCA TATCTTGCACGCGAC DKAM_0308 286622 - 286795 + | hypothetical protein TERM 99 287179 - 287213 + G 81 -8.6 -4.39002 | gap 1, overlap 287183 TGGAGGCAGACCTGA GGAGGGTCAAGGCGG CGCTGA CCGCCCTGATC-TCC TTTTCTAAAAAATTT DKAM_0309 286818 - 287270 + | hypothetical protein DKAM_0310 287353 - 287228 - | hypothetical protein DKAM_0311 287876 - 287304 - | hypothetical protein DKAM_0312 288855 - 287866 - | glycosyl transferase, family 2 TERM 100 288333 - 288359 + g 72 -10.2 -2.88999 | gap 1 GCGGTATCAGGACGC CGCTC-ACCGC CTGCCT GCGGTAGAGCG TGTCATGTGTCCCGC DKAM_0313 289572 - 288907 - | hypothetical protein DKAM_0314 290346 - 289708 - | class II aldolase/adducin family protein TERM 101 289750 - 289762 + g 71 -6.9 -4.16016 | GTGATCCGGTACTAG CGGGG TCT TCCCG TTTGTTAGGAGCTCC DKAM_0315 290645 - 290815 + | hypothetical protein DKAM_0316 292132 - 290885 - | glycosyl transferase, group 1 DKAM_0317 292410 - 292234 - | hypothetical protein TERM 102 292553 - 292541 - R 82 -3.3 -5.48514 | AGCAATAAATAAAAA CCATC GAG GAGGG ACTGAAGGAGCACGT DKAM_0318 293985 - 292699 - | transport protein DKAM_0319 294387 - 294581 + | hypothetical protein DKAM_0320 295341 - 294565 - | Ser/Thr protein kinase-like protein DKAM_0321 296717 - 295317 - | tRNA nucleotidyltransferase (CCA-adding enzyme) TERM 103 295944 - 295932 - G 70 -9.1 -3.31905 | overlap 295930 ATGCGTGAGATAACA CCTGG ATG CCAGG CTGAATATTGCAAGG TERM 104 296588 - 296610 + g 71 -7.7 -3.89346 | opp_overlap 296593 TTACCTCGGCTTCGA CACCATGCT TTCTC AGCACGGTG TTTATAGCATCGGCG DKAM_0322 297314 - 296736 - | 2'-5' RNA ligase TERM 105 296783 - 296794 + g 74 -5.8 -4.71776 | overlap 296785 ATATTGGTCCACGCG GCGT TAAG ACGC TTTTCTTAACTATTA DKAM_0323 297386 - 297931 + | Dephospho-CoA kinase, CoaE DKAM_0324 297924 - 298316 + | protein of unknown function DUF54 DKAM_0325 298364 - 299104 + | DNA polymerase sliding clamp A DKAM_0326 299105 - 299740 + | hypothetical protein DKAM_0327 300027 - 301190 + | PhoH family protein DKAM_0328 303345 - 302485 - | methyltransferase DKAM_0329 304048 - 303332 - | Endonuclease III DKAM_0330 305355 - 304057 - | asparaginyl-tRNA synthetase DKAM_0331 306108 - 305554 - | ribosomal-protein-alanine acetyltransferase DKAM_0332 306184 - 307404 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase DKAM_0333 307585 - 307881 + | transposase, IS605 OrfB family DKAM_0334 307863 - 308000 + | hypothetical protein DKAM_0335 308931 - 307981 - | hypothetical protein DKAM_0336 309804 - 309025 - | protein of unknown function DUF137 DKAM_0337 310630 - 309788 - | kinase (sugar kinase superfamily)-like protein DKAM_0338 311931 - 310648 - | phosphonopyruvate decarboxylase-related protein DKAM_0339 311985 - 312770 + | Daunorubicin resistance ATP-binding protein-like protein DKAM_0340 312767 - 314026 + | ABC-type Na+ efflux pump, permease TERM 106 314215 - 314225 + T 78 -5.4 -5.0538 | opp_overlap 314210, overlap 314210 TTATCAATAAGCAGG CAGT CCT ACTG TTTTTTAGAGTAGAA DKAM_0341 315035 - 314220 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase DKAM_0342 316029 - 315094 - | 2-dehydropantoate 2-reductase DKAM_0343 316898 - 316026 - | transcriptional regulator, Fis family DKAM_0344 317550 - 316885 - | hypothetical protein TERM 107 317224 - 317236 + g 74 -10.5 -3.26546 | TATACGGGGATCATC CCCGG TCT CCGGG TTAATCGATTTCTCC DKAM_0345 317727 - 317840 + | hypothetical protein DKAM_0346 317837 - 318562 + | Daunorubicin resistance ATP-binding protein-like protein DKAM_0347 318574 - 319830 + | ABC-2 type transporter TERM 108 320106 - 320096 - g 73 -4.6 -4.84642 | GTTAAATCAAGAAAA GAGG CCT CCCC CTACATAGTGACCGA DKAM_0348 319880 - 320365 + | regulatory protein, MarR DKAM_0349 320380 - 321783 + | Alpha amylase DKAM_0350 321780 - 323324 + | Alpha-amylase TERM 109 324646 - 324630 - g 77 -7.3 -4.48299 | overlap 324631 CCATACCTAAATAAA CCTGGAT TCA ATCCAGA CTGGTATAGAAGGGT DKAM_0351 323325 - 325265 + | glycoside hydrolase, family 57 DKAM_0352 325265 - 326821 + | glycosyl transferase, group 1 TERM 110 328722 - 328685 - g 88 -14.4 -3.01912 | GGAGATCGAGATATA TCCATCCATACCATCG AATCCA CGATAGTATGGATAGA AATAAATACCACCCA DKAM_0353 326835 - 328712 + | glycoside hydrolase, family 57 TERM 111 329625 - 329613 - g 70 -10.5 -2.50035 | overlap 329608 329612 329610 GACATAGGAAGATAT CCGGG ATA CCCGG TAGAGTAGATATTGA DKAM_0354 328766 - 329710 + | hypothetical protein DKAM_0355 330336 - 329722 - | hypothetical protein DKAM_0356 330895 - 330317 - | transmembrane electron transport protein TERM 112 330616 - 330631 + g 73 -4.6 -4.84761 | opp_overlap 330615, overlap 330618 CAATATAAATTAATC CCCCTG TCTC CAGGAG TTTTTGTAAACCTAT DKAM_0357 330915 - 331037 + | hypothetical protein DKAM_0358 332127 - 331027 - | Probable protease htpX - like protein DKAM_0359 334194 - 332266 - | serine proteases-like protein DKAM_0360 335524 - 334622 - | metallophosphoesterase TERM 113 334931 - 334914 - G 70 -9.1 -3.36046 | opp_overlap 334913 334914, overlap 334912 ATTATAATTAGAATA CCCCCTG TTTC CAGAGGG ATTTTCATGAATACT TERM 114 335884 - 335854 - H 79 -11 -3.03243 | ACCTACGGGTTAAGA GCCCGCCGCTCTAC CAG GCTGAGCTACGGGC CCATGTCCAATTCAA TERM 115 336221 - 336207 - g 72 -8.6 -3.78329 | CCTGAGGAAGGCAAA GTCATC TAG GATGAC TGAGAAGAAGCCTGA DKAM_0361 336016 - 336660 + | hypothetical protein DKAM_0362 337043 - 336684 - | hypothetical protein TERM 116 338436 - 338419 - g 76 -7.7 -4.26589 | opp_overlap 338421 ATTACATAGTTAAAA CAGCCCT TAAC AAGGCTG GTATAAGAAATACTG TERM 117 339151 - 339134 - g 74 -5.5 -4.63542 | overlap 339125 GATAACTGTTAAAAA CACTCCG AGCC CTGAGTG GGAGAAACTCTGGTG DKAM_0363 337254 - 339167 + | Indolepyruvate oxidoreductase subunit iorA DKAM_0364 339174 - 339776 + | Indolepyruvate oxidoreductase subunit iorB DKAM_0365 339763 - 339969 + | hypothetical protein DKAM_0366 340448 - 340014 - | hypothetical protein DKAM_0367 340566 - 341519 + | iron-sulfur cluster loop TERM 118 341730 - 341694 - g 86 -8.8 -4.48792 | gap 1, overlap 341696 AGAAGTGAAAAAGAA GATC-CGGGAAGGAGAT AGAG ATCTCCTCCCAGAGACC GAGGATACACTCATC TERM 119 341726 - 341696 - g 86 -11.3 -3.83257 | gap 1, overlap 341694 AAGTGAAAAAGAAGA TCCGGGAAGGAGAT AGAG ATCTCC-TCCCAGA GACCGAGGATACACT DKAM_0368 341500 - 341910 + | hypothetical protein DKAM_0369 342777 - 341911 - | methyltransferase-like protein TERM 120 342776 - 342766 - G 74 -6.8 -4.32857 | GGGTTTAAATACAAA TGCC TCG GGCA CGGTTCATACCTGGA DKAM_0370 343200 - 342802 - | putative transcriptional regulator, CopG family DKAM_0371 344091 - 343201 - | ABC-type Mn2+/Zn2+ transport system, permease component DKAM_0372 345095 - 344088 - | ABC transporter, substrate binding protein DKAM_0373 345144 - 345923 + | ABC transporter, ATP binding protein TERM 121 346018 - 346043 + G 83 -9.9 -4.12532 | gap 1, opp_overlap 346018 346017 346020 GCACCCTGAAGGAAT GATCGTAGCCTA CCC TAGG-TACGATC TTTATATCTCAGGGA DKAM_0374 345944 - 346783 + | hypothetical protein DKAM_0375 349253 - 346848 - | Aldehyde oxidase and xanthine dehydrogenase family protein, large subunit TERM 122 348416 - 348394 - G 72 -10.6 -2.87132 | opp_overlap 348394 348394 TTCTTCGTGTATAGA GCTGCTAACG CGG CTTTAGCAGC TATCTCGTTGCCCAC TERM 123 348394 - 348416 + g 73 -10.6 -3.00298 | opp_overlap 348394, overlap 348394 TTCTTCGTGTATAGA GCTGCTAACG CGG CTTTAGCAGC TATCTCGTTGCCCAC DKAM_0376 349799 - 349266 - | Aldehyde oxidase and xanthine dehydrogenase family protein, small subunit DKAM_0377 350577 - 349801 - | Aldehyde oxidase and xanthine dehydrogenase family protein, middle subunit DKAM_0378 350818 - 351825 + | Pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 124 352835 - 352812 - g 76 -11.8 -2.57244 | gap 1, opp_overlap 352823, overlap 352808 352817 GGAGTTATGAATGGA TGGAAGCCTGG TGG CCAGGC-TCCA CATGGAACCCTGGAG TERM 125 352831 - 352817 - g 75 -11.4 -3.10409 | opp_overlap 352823, overlap 352812 352808 TATGAATGGATGGAA GCCTGG TGG CCAGGC TCCACATGGAACCCT DKAM_0379 351989 - 353230 + | Protein of unknown function DUF650 DKAM_0380 353232 - 354029 + | DNA repair photolyase DKAM_0381 354815 - 354069 - | hypothetical protein DKAM_0382 355116 - 354799 - | hypothetical protein DKAM_0383 355478 - 355104 - | hypothetical protein DKAM_0384 355842 - 355492 - | hypothetical protein DKAM_0385 355925 - 356809 + | hypothetical protein DKAM_0386 358025 - 356811 - | putative multiple substrate aminotransferase DKAM_0387 358095 - 359672 + | Radical SAM domain protein DKAM_0388 360401 - 359640 - | 3-hydroxy-3-methylglutaryl-coenzyme A reductase TERM 126 360395 - 360385 - G 83 -4 -5.28481 | GATTCAAGTAAAAAA TCTA TGT TAGA CTCCAACTCGCTTAA DKAM_0389 360813 - 360391 - | protein of unknown function DUF35 DKAM_0390 361875 - 360817 - | 3-hydroxy-3-methylglutaryl CoA synthase TERM 127 361047 - 361035 - G 72 -9.1 -3.56568 | CAAGCACGCGGGAAA GCCCT ATG AGGGC TGACGAATTATAGCT DKAM_0391 363034 - 361916 - | oligopeptide/dipeptide ABC transporter, ATPase subunit DKAM_0392 364005 - 363040 - | oligopeptide/dipeptide ABC transporter, ATPase subunit DKAM_0393 364172 - 364002 - | hypothetical protein DKAM_0394 364153 - 365145 + | Fe-S oxidoreductase DKAM_0395 367198 - 365267 - | binding-protein-dependent transport systems inner membrane component TERM 128 366193 - 366206 + g 72 -6.7 -4.21462 | opp_overlap 366193 TTATATTAGTTACAA CTACC GAGG GGTAG TTTTCACTCATAGCT DKAM_0396 368317 - 367211 - | binding-protein-dependent transport systems inner membrane component TERM 129 368315 - 368303 - G 71 -10.5 -2.7035 | overlap 368300 CCTAGCTATATAGTA GCCGG CTC CCGGC ATTCAACCACCATTA TERM 130 368540 - 368530 - R 74 -4 -5.01732 | opp_overlap 368530 AAGGGGGTGAAAAAA CTAA GCC TTAG GTTTTCTTACCAGGG DKAM_0397 371478 - 368530 - | Predicted solute binding protein DKAM_0398 371548 - 372093 + | hypothetical protein DKAM_0399 372385 - 372155 - | hypothetical protein TERM 131 372542 - 372595 + rH 100 -11.9 -3.92659 | gap 1, opp_overlap 372559, overlap 372545 372559 AAGTTACAATATCTT GCCGCTGTATTCCTAAACCCTTGGTT TCT AACCAAGGGTTTCG-AATCCAGCCTC TTTAGATTTTAGAAG TERM 132 372545 - 372592 + rH 100 -16.6 -2.72204 | gap 1, opp_overlap 372559, overlap 372542 372559 TTACAATATCTTGCC GCTGTATTCCTAAACCCTTGGTT TCT AACCAAGGGTTTCG-AATCCAGC CTCTTTAGATTTTAG TERM 133 372559 - 372579 + rH 100 -14.1 -3.60098 | opp_overlap 372559, overlap 372545 372542 CGCTGTATTCCTAAA CCCTTGGTT TCT AACCAAGGG TTTCGAATCCAGCCT TERM 134 372579 - 372559 - RH 100 -14.1 -3.57144 | opp_overlap 372545 372542 372559 CGCTGTATTCCTAAA CCCTTGGTT TCT AACCAAGGG TTTCGAATCCAGCCT TERM 135 372874 - 372832 - RH 100 -12.9 -3.54838 | gap 1 AATAGATGCAGAGAA CCT-CCCACCCTAAAGGG AACCCCAA CCCTTTAGAGCGGGGAGG AGGTCAGGACATCTA DKAM_0400 373170 - 372934 - | hypothetical protein DKAM_0401 373154 - 373267 + | hypothetical protein DKAM_0402 373592 - 376519 + | Beta-galactosidase DKAM_0403 377370 - 376516 - | ABC-type maltodextrin transport system, permease component TERM 136 377077 - 377065 - G 71 -7.7 -3.91897 | GTTTTTACCTAGAAA CTCGA ATC TCGAG AACGCGTACCCAGAT DKAM_0404 378709 - 377372 - | ABC-type sugar transport systems permease component DKAM_0405 380383 - 378836 - | Cyclomaltodextrin binding protein DKAM_0406 382919 - 380502 - | arabinogalactan endo-1,4-beta-galactosidase, putative TERM 137 380682 - 380692 + g 72 -5.4 -4.54608 | GGTCGTAGTTATAGT CTGT GTC ACAG TTTCTATTTGTTTTA TERM 138 382835 - 382845 + g 72 -5.4 -4.51812 | CATGTATAGTGCTAC TGCT CTG AGCA TTTATTATTATCAGG DKAM_0407 384207 - 383212 - | respiratory-chain NADH dehydrogenase, subunit 1 DKAM_0408 384565 - 384209 - | hypothetical protein DKAM_0409 386160 - 384568 - | Hydrogenase 4, component F or formate hydrogen lyase TERM 139 385091 - 385110 + g 71 -10 -3.25918 | overlap 385089 385087 TGTGAGATCATGTGG GCTATGGC GCCT GCCATGGC TATCTTTACAGCTTC DKAM_0410 386688 - 386173 - | Putative integral membrane protein, DUF68 family DKAM_0411 387089 - 386685 - | NADH-ubiquinone oxidoreductase, chain 4L DKAM_0412 387903 - 387082 - | Na+/H+ antiporter, MnhB subunit DKAM_0413 388163 - 387900 - | hypothetical protein DKAM_0414 388552 - 388160 - | Na+/H+ antiporter, MnhG subunit DKAM_0415 388830 - 388555 - | Na+/H+ antiporter MnhF subunit DKAM_0416 389228 - 388827 - | NADH-ubiquinone oxidoreductase, subunit I DKAM_0417 390418 - 389201 - | NADH-ubiquinone oxidoreductase, chain 49 kDa DKAM_0418 390866 - 390423 - | NADH dehydrogenase (ubiquinone), 30 kDa subunit DKAM_0419 391332 - 390850 - | NADH-quinone oxidoreductase, B subunit DKAM_0420 393695 - 391398 - | (NiFe) hydrogenase maturation protein HypF DKAM_0421 393944 - 393720 - | hydrogenase assembly chaperone hypC/hupF DKAM_0422 395004 - 393955 - | hydrogenase expression/formation protein HypE DKAM_0423 396596 - 395043 - | dihydropteroate synthase-related protein DKAM_0424 397319 - 396606 - | archaeal flavoprotein DKAM_0425 397721 - 397332 - | hypothetical protein DKAM_0426 398445 - 397714 - | hypothetical protein DKAM_0427 399331 - 398459 - | hypothetical protein DKAM_0428 399863 - 399318 - | hypothetical protein DKAM_0429 400052 - 400429 + | Desulfoferrodoxin, ferrous iron-binding region TERM 140 400450 - 400465 + G 72 -2.6 -5.07567 | overlap 400451 TTGGAGAAAAACCGG TTACTT CATG AAGTAG TTTTTTCCGCTCTCG TERM 141 400508 - 400496 - g 78 -5.5 -4.84914 | overlap 400497 400499 AGGCATACAATAAAA CCAGG TCT CCTGA GGCCACTGCCCGCCT DKAM_0430 400435 - 400737 + | hypothetical protein DKAM_0431 400740 - 401177 + | putative transcriptional regulator, AsnC family TERM 142 401299 - 401270 - f 100 -14.5 -2.98072 | opp_overlap 401267 401266 401260, overlap 401265 CTGACCAGAACCATA CCTACTTTATAGG ATAT CCCATAAAGTAGG ATAATGCTGTCTTTG TERM 143 401483 - 401461 - f 100 -9.2 -4.73448 | opp_overlap 401474, overlap 401471 AGAGATAGTGAAAAA CCTGATAAAG CAG CTCCATCAGG GAGTTGATGTAAAGG DKAM_0432 401520 - 401765 + | putative PAS/PAC sensor protein DKAM_0433 401938 - 402876 + | Protease DKAM_0434 404342 - 403401 - | Membrane protein of unknown function DUF63 DKAM_0435 405113 - 404349 - | PA14 domain protein TERM 144 405054 - 405076 + g 77 -10.6 -3.30124 | opp_overlap 405057, overlap 405057 CTTGACACCGTTGAG TAAGCCTGGC TTA GCCAGCCTTA TTGTGACCAATGACA TERM 145 405603 - 405587 - g 71 -9.5 -3.28924 | GAGGGTTCTTGAGAA GTTGATC ACG GATCAAC TAACCAGGACTAAGT DKAM_0436 405189 - 405980 + | Metal dependent phosphohydrolase TERM 146 406957 - 406939 - g 72 -6 -4.50583 | AAGACTATTACAAAA CCACCCTA CCC TAGGATAG ACTATGACTCAGCAC DKAM_0437 406168 - 407334 + | tRNA synthetase, class II (D, K and N) DKAM_0438 407349 - 407993 + | IS element ISDka1 orfA, putative resolvase DKAM_0439 407986 - 409275 + | IS element ISDka1 orfB, putative transposase DKAM_0440 409393 - 409665 + | hypothetical protein DKAM_0441 411064 - 409652 - | NADH:polysulfide oxidoreductase TERM 147 410730 - 410757 + g 77 -10.6 -3.36492 | gap 1, overlap 410733 ACTCCTTCAACCTTG TAGGCCTCGGGCT TGG AGCCCGTGGC-TA TTATCAGGTTGCCGA TERM 148 410733 - 410755 + g 90 -14.8 -3.25192 | overlap 410730 CCTTCAACCTTGTAG GCCTCGGGCT TGG AGCCCGTGGC TATTATCAGGTTGCC DKAM_0442 412018 - 411131 - | Predicted hydrolase (metallo-beta-lactamase superfamily) TERM 149 412134 - 412100 - R 73 -3.5 -4.91977 | overlap 412102 GACCAAAATATAAAA CACTCAGCCAGCTAC AGTAA GCAGCTTCCTGAGCA CTGAGAGAGAGGTTG DKAM_0443 412300 - 412103 - | hypothetical protein DKAM_0444 412960 - 412319 - | hypothetical protein DKAM_0445 414192 - 412960 - | hypothetical protein DKAM_0446 415178 - 414189 - | MoxR-related ATPase, AAA superfamily TERM 150 415407 - 415391 - R 71 -10.1 -2.62522 | overlap 415390 GCAGGGAACAGTAAG CCACCCT CTC AGGGCGG AGAGGAGGTCAGTCT DKAM_0447 418571 - 417219 - | serine protease DKAM_0448 419376 - 418588 - | stomatin/prohibitin - like protein DKAM_0449 419537 - 420427 + | hypothetical protein DKAM_0450 421632 - 420424 - | Permeases of the major facilitator superfamily protein DKAM_0451 422431 - 421661 - | hypothetical protein DKAM_0452 423162 - 422431 - | hypothetical protein DKAM_0453 423851 - 423159 - | hypothetical protein TERM 151 423814 - 423797 - G 73 -7.7 -4.08216 | TCATGGTGTGGAAAA CCACGGT TACA ACCGTAG CATGATCACGCCTCT DKAM_0454 423950 - 424075 + | hypothetical protein DKAM_0455 425729 - 424305 - | RNA-loop binding protein FAU-1 DKAM_0456 427207 - 425828 - | Seryl-tRNA synthetase TERM 152 427166 - 427183 + g 73 -11.3 -2.75252 | opp_overlap 427165, overlap 427163 GTGTTCCTTTAATAG CTCAGGG TTAT CCCTGAG TAGTGTTAAAATACT DKAM_0457 427654 - 427295 - | FeS assembly SUF system protein DKAM_0458 427959 - 427660 - | hypothetical protein DKAM_0459 428965 - 427967 - | Putative ribulose-1,5-bisphosphate isomerase DKAM_0460 429897 - 428962 - | Translation initiation factor eIF-2B, delta subunit DKAM_0461 430794 - 429925 - | hypothetical protein TERM 153 431173 - 431195 + G 76 -9.2 -3.77196 | overlap 431141 AATCAATCCAGGGTG CTCGTGTTAT GGA ATAGCACGGG TTTAGTGAATAATCC DKAM_0462 430852 - 432339 + | hypothetical protein DKAM_0463 432853 - 432422 - | Predicted membrane-bound metal-dependent hydrolase DKAM_0464 433590 - 432859 - | ribose 5-phosphate isomerase TERM 154 434170 - 434142 - g 79 -9.6 -3.7511 | gap 1, opp_overlap 434139 434143, overlap 434139 CGCCGGAGAACACAA CGTCCCCGTGGTA CTCT TAGC-CGGGGACG AACACCTCAGAGCCG DKAM_0465 433696 - 434550 + | peptidase M55, D-aminopeptidase DKAM_0466 435184 - 434606 - | metal dependent phosphohydrolase DKAM_0467 436608 - 435199 - | Pyruvate/oxaloacetate carboxyltransferase TERM 155 436186 - 436200 + g 79 -10 -3.72141 | opp_overlap 436184 GCCCTGGACTATAGC GCCAAG CTT CTTGGC TTTAGCTATGGATGT DKAM_0468 437976 - 436798 - | Aspartate aminotransferase (AspC), conjectural TERM 156 436835 - 436846 + g 76 -4.4 -4.92783 | GCGAGGCGTTCTATG CCTT CAAC AAGG TTTTTCTCATCCATT DKAM_0469 439495 - 438140 - | predicted DNA-binding protein DKAM_0470 440479 - 439499 - | putative deoxyhypusine synthase DKAM_0471 440582 - 441259 + | hypothetical protein DKAM_0472 441367 - 441501 + | hypothetical protein DKAM_0473 441521 - 442222 + | hypothetical protein DKAM_0474 443178 - 442270 - | Dihydroorotate dehydrogenase, PyrD DKAM_0475 443941 - 443171 - | Probable dihydroorotate dehydrogenase electron transfer subunit DKAM_0476 444548 - 443925 - | Orotate phosphoribosyltransferase, PyrE DKAM_0477 445210 - 444536 - | Orotidine-5'-phosphate decarboxylase, PyrF DKAM_0478 445851 - 445252 - | phosphoribosyltransferase DKAM_0479 447429 - 445858 - | GMP synthase DKAM_0480 448691 - 447549 - | pyridoxal-5'-phosphate-dependent protein beta subunit DKAM_0481 449306 - 448707 - | Glutamine amidotransferase subunit pdxT DKAM_0482 450316 - 449309 - | Pyridoxal biosynthesis lyase pdxS TERM 157 449808 - 449820 + g 70 -9.1 -3.30159 | TAGATTCTTCTCAAC GCCTC TGG GAGGC TTCTAGCACCATTAA TERM 158 450549 - 450522 - g 77 -10.6 -3.34895 | opp_overlap 450522 450526 TGTATCTTGAATTAA GGGATAGGGTAG CATG CCACCCTATTCC TGTCTCCGGTGAACC TERM 159 450522 - 450549 + G 72 -10.6 -2.89564 | opp_overlap 450522, overlap 450526 TGTATCTTGAATTAA GGGATAGGGTAG CATG CCACCCTATTCC TGTCTCCGGTGAACC DKAM_0483 450479 - 450673 + | hypothetical protein TERM 160 452025 - 452040 + G 72 -9 -3.53811 | CGGCCGAGTTCTCGA GGCTTG TTAA CAAGCC TTTGAAAGAGGTACA DKAM_0484 450887 - 452440 + | carbohydrate kinase, YjeF related protein DKAM_0485 453403 - 452450 - | DNA adenine modification methylase TERM 161 453468 - 453444 - H 70 -7.3 -3.86015 | opp_overlap 453443 453441 453444 453446 TATGGGGCCGAGAAA TATATTTGTTG AAA CAACGAATATA ATCTTTTAAACGATC TERM 162 453444 - 453468 + H 70 -9.5 -2.78508 | opp_overlap 453444, overlap 453443 453441 453446 TATGGGGCCGAGAAA TATATTTGTTG AAA CAACGAATATA ATCTTTTAAACGATC DKAM_0486 453661 - 453804 + | hypothetical protein DKAM_0487 454156 - 455067 + | ABC transporter related DKAM_0488 455064 - 456641 + | ABC transporter transmembrane protein DKAM_0489 457079 - 456837 - | hypothetical protein DKAM_0490 457742 - 457083 - | Aldehyde ferredoxin oxidoreductase TERM 163 457990 - 457974 - R 71 -10.1 -2.62522 | overlap 457973 GCAGGGAACAGTAAG CCACCCT CTC AGGGCGG AGAGGAGGCCGGACG DKAM_0491 458680 - 458012 - | Metallophosphoesterase, calcineurin superfamily TERM 164 459170 - 459151 - g 71 -7.8 -3.93673 | overlap 459161 GAAATAGTTGAGAAA GGGAGAGC AAGA GGTCTCCC ATACCTCCCCTGTAG TERM 165 459178 - 459196 + G 79 -8.8 -4.08767 | GGTCTCCCATACCTC CCCTGTAG CTA CTGCGGGG TTTTCCGCAGATACG DKAM_0492 458761 - 459780 + | Predicted ATPase of the PP-loop superfamily DKAM_0493 461288 - 460071 - | predicted ABC transporter DKAM_0494 464859 - 461278 - | hypothetical protein DKAM_0495 465598 - 464882 - | ABC transporter, ATP binding subunit DKAM_0496 465687 - 466142 + | transcriptional regulator, PadR-like family DKAM_0497 466146 - 467123 + | daunorubicin resistance ABC transporter ATPase subunit TERM 166 467320 - 467340 + G 78 -12.7 -2.63102 | opp_overlap 467304, overlap 467311 CTACCGTAATGCCGG TGCCAGTAA ATG TTACTGGCA TCGTGTCAAGATACT DKAM_0498 467124 - 467990 + | daunorubicin resistance ABC transporter, inner membrane subunit B DKAM_0499 468090 - 470042 + | Aldehyde ferredoxin oxidoreductase-like protein TERM 167 470361 - 470347 - g 72 -5 -4.59109 | overlap 470348 CATAGTGTTCAAAAA CTATCC AAG GGATAA ATGGGAGGAGATCGG DKAM_0500 470159 - 472435 + | Arginyl-tRNA synthetase DKAM_0501 472453 - 473292 + | protein of unknown function DUF6, transmembrane DKAM_0502 473305 - 474555 + | molybdenum cofactor synthesis domain protein TERM 168 474601 - 474639 + T 73 -7.4 -4.16016 | CAGCAATCATATTGT CCTGGTTAAGGCCTCTAC CTC GTAGAGGCTTGAGGGAGG TTTATTAAGCAATGG DKAM_0503 474849 - 474592 - | hypothetical protein DKAM_0504 475192 - 474971 - | Carbon starvation protein DKAM_0505 475398 - 475586 + | hypothetical protein DKAM_0506 477163 - 475598 - | putative polysaccharide biosynthesis protein DKAM_0507 477291 - 477506 + | hypothetical protein DKAM_0508 477775 - 478512 + | hypothetical protein DKAM_0509 478533 - 479732 + | archaeal flagellar protein J - like protein DKAM_0510 479745 - 480479 + | nitroreductase DKAM_0511 480522 - 480887 + | hypothetical protein DKAM_0512 480898 - 481173 + | hypothetical protein DKAM_0513 481337 - 481188 - | hypothetical protein DKAM_0514 481895 - 481644 - | ferredoxin DKAM_0515 482103 - 482315 + | Cation transporting ATPase (E1-E2 family) protein DKAM_0516 482772 - 482344 - | hypothetical protein DKAM_0517 484741 - 483287 - | FAD dependent oxidoreductase TERM 169 484036 - 484080 + g 86 -14.3 -2.71144 | overlap 484038 484046 CTATCCTTACCCCTA TATCGAGGGGGCCTGGCTCAG TCT CTATGCCAAGCTTCCTCGATA TAGTTGAAAACCATC TERM 170 484038 - 484078 + g 79 -12.5 -2.90075 | overlap 484036 484046 ATCCTTACCCCTATA TCGAGGGGGCCTGGCTCAG TCT CTATGCCAAGCTTCCTCGA TATAGTTGAAAACCA DKAM_0518 485766 - 484738 - | Adenylosuccinate synthase TERM 171 485686 - 485709 + g 76 -7.4 -4.21194 | AGGCTTATCGCTGAG GGCCAGGTAG GCTG CTATCTTGCC TTTTCCCTCATCCCC DKAM_0519 485908 - 486669 + | phosphoribosylaminoimidazolesuccinocarboxamide synthase DKAM_0520 486653 - 486910 + | Phosphoribosylformylglycinamidine synthase DKAM_0521 486900 - 487592 + | Phosphoribosylformylglycinamidine synthase I DKAM_0522 487586 - 489781 + | phosphoribosylformylglycinamidine synthase II TERM 172 490967 - 490949 - g 86 -11.8 -3.55563 | AGCCCACCCTTCAAA TACCCATG TTT CATGGGTA TAGATATCCCAGCAA TERM 173 491001 - 490987 - g 79 -4.2 -5.15634 | TATCCCAGCAAAAAA CGAGCT GAT AGCTGG GGATCTGACCCCGGA DKAM_0523 489809 - 491179 + | amidophosphoribosyltransferase DKAM_0524 491186 - 492466 + | Amidophosphoribosyltransferase (ATASE) DKAM_0525 492463 - 493962 + | phosphoribosylamine--glycine ligase DKAM_0526 493968 - 495224 + | Phosphoribosylglycinamide formyltransferase 2 DKAM_0527 495232 - 495618 + | phosphoribosylaminoimidazole carboxylase DKAM_0528 495611 - 496630 + | phosphoribosylformylglycinamidine cyclo-ligase DKAM_0529 496620 - 497729 + | IMP biosynthesis enzyme PurP-like protein DKAM_0530 497739 - 499082 + | Adenylosuccinate lyase DKAM_0531 499085 - 500152 + | IMP biosynthesis enzyme PurP-like protein DKAM_0532 500200 - 500919 + | adenine phosphoribosyltransferase TERM 174 501154 - 501133 - T 100 -12.9 -3.80625 | overlap 501134 GCTTTACAACTGAAA GCCCCGCCC TTTA GGGCGGGGA GGAGGTCAGGTGTTT TERM 175 501153 - 501134 - T 100 -16.4 -2.88054 | overlap 501133 CTTTACAACTGAAAG CCCCGCCC TTTA GGGCGGGG AGGAGGTCAGGTGTT DKAM_0533 501960 - 501430 - | 2-oxoglutarate oxidoreductase gamma subunit DKAM_0534 502787 - 501957 - | 2-oxoglutarate ferredoxin oxidoreductase, beta subunit DKAM_0535 503902 - 502778 - | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha DKAM_0536 504171 - 503899 - | 2-oxoglutarate ferredoxin oxidoreductase, delta subunit DKAM_0537 504489 - 504364 - | hypothetical protein DKAM_0538 505318 - 504569 - | beta-lactamase domain protein TERM 176 504722 - 504683 - G 72 -10.6 -2.79452 | opp_overlap 504683 504718, overlap 504682 ATGTGTCAACACAAG GGATGCAACCCCGGCTTC GATG GCTGTCAGGGCTGCATCC TTAGATGTTGAATGA DKAM_0539 506330 - 505308 - | putative RNA methylase TERM 177 506000 - 506022 + g 80 -6.2 -4.74706 | ATAAAGTATACTTCT CGGCGGTAGT GTT GCTAACGCTG TTTTTCAATATTGAC DKAM_0540 507243 - 506338 - | ribose-phosphate pyrophosphokinase DKAM_0541 507293 - 508375 + | Pyruvate-formate lyase-activating enzyme TERM 178 508511 - 508492 - g 86 -9.3 -4.48713 | TGCAGCAATAATAAA CCTCGAC CCAGCT GTCGAGG AGATCCCATATGACC DKAM_0542 508382 - 509167 + | predicted ATP binding protein DKAM_0543 509742 - 509134 - | Heavy metal translocating P-type ATPase DKAM_0544 510806 - 509745 - | Asparaginase TERM 179 510575 - 510600 + g 76 -9 -3.73068 | CCTCCATGCATCTCA CGGCCTCAAC TACTGT GTTGAGGGCG TTATTGGATTCCCCG DKAM_0545 510885 - 512234 + | protein of unknown function DUF95, transmembrane DKAM_0546 513265 - 512276 - | Glucokinase (ROK family protein) TERM 180 512640 - 512692 + g 77 -11.9 -2.78266 | opp_overlap 512649, overlap 512637 512678 ATTGAGATCCTCTTG GCGAGGAGACTACCTGAGGCTAGCC CTG GGTTCCTCTCAAGTAGCCACCTCGC TACTCTTGGTAAGTT DKAM_0547 514771 - 513275 - | methionyl-tRNA synthetase DKAM_0548 516353 - 514836 - | Fe-S oxidoreductase DKAM_0549 516676 - 516356 - | hypothetical protein DKAM_0550 517079 - 516696 - | hypothetical protein TERM 181 517860 - 517877 + H 78 -9.1 -3.80276 | CTTATGTTTGCGTGT CTCGGGG CCGC CCTCGAG TTGTGTTCTGTGAGT DKAM_0551 517983 - 518114 + | hypothetical protein DKAM_0552 518872 - 518423 - | hypothetical protein DKAM_0553 519297 - 518923 - | Dinitrogenase iron-molybdenum cofactor biosynthesis protein DKAM_0554 519557 - 519300 - | hypothetical protein DKAM_0555 519682 - 519554 - | hypothetical protein TERM 182 520564 - 520536 - g 79 -4.6 -5.21236 | overlap 520530 520527 520524 520561 AAGCCACAAGAAAAA GAAGTTTCTCGA GGAAT TCAAGAAGCTCC TAGAAGAGGTCGAAA DKAM_0556 519946 - 520602 + | IS element ISDka1 orfA, putative resolvase DKAM_0557 520586 - 521326 + | IS element ISDka1 orfB, putative transposase DKAM_0558 521332 - 521490 + | hypothetical protein DKAM_0559 522622 - 522155 - | hypothetical protein DKAM_0560 523469 - 522633 - | hypothetical protein TERM 183 523371 - 523337 - G 73 -4.5 -4.82333 | AGAACAACTCAAAAA CAACTTTGTAC-GCCTC CTC AAGGCTGT-CAAAGTTA ACGTATTGAAGAAGT DKAM_0561 526678 - 523466 - | hypothetical protein TERM 184 525649 - 525669 + g 70 -2.5 -4.91429 | GCACTTCACTTATCG GGGCTTTTA ACC TAACGGCTC TTTTCTTTACAATTT DKAM_0562 529643 - 526680 - | predicted DNA methylase containing a Zn-ribbon module TERM 185 528969 - 528986 + g 72 -5.5 -4.42464 | overlap 528972 ATCTTTGTTTATCTT GAACCCT ATGT AGGGTCC TTTCTTTCCGAGCTT DKAM_0563 530168 - 530022 - | hypothetical protein DKAM_0564 530341 - 530177 - | hypothetical protein DKAM_0565 531010 - 531294 + | hypothetical protein DKAM_0566 531291 - 531869 + | hypothetical protein DKAM_0567 532595 - 532149 - | GIYc domain containing protein DKAM_0568 533023 - 532604 - | hypothetical protein DKAM_0569 533591 - 533058 - | hypothetical protein DKAM_0570 533684 - 534403 + | SNARE associated Golgi protein DKAM_0571 534678 - 535304 + | hypothetical protein DKAM_0572 536559 - 535357 - | hypothetical protein TERM 186 536596 - 536576 - H 81 -11.3 -2.8076 | overlap 536573 AAGCAGCACCAATCA CTTCATGTA ATA TACATGAAG CTTAAAAGTAGATAG TERM 187 536977 - 536959 - g 74 -10.3 -3.24188 | overlap 536943 536962 CTACAGGATCATCAA GAACCCG GAGCA CGGGTTC ACCGGAGACAGGGAT DKAM_0573 536918 - 537106 + | hypothetical protein DKAM_0574 537210 - 538232 + | AIR synthase related protein domain protein DKAM_0575 538222 - 539067 + | Dual specificity protein phosphatase DKAM_0576 539244 - 539119 - | hypothetical protein DKAM_0577 539837 - 539313 - | hydrogenase maturation protease TERM 188 539809 - 539793 - G 77 -3.6 -5.2422 | AAGTAGAGTAAAAAA CCCCTG TGGAT CAGCGG TCTCGGGTCGTGGGC DKAM_0578 540882 - 539824 - | Pyruvate synthase subunit porB DKAM_0579 542144 - 540885 - | Pyruvate synthase subunit porA TERM 189 541929 - 541912 - G 70 -9.9 -3.07816 | opp_overlap 541912 GCCGCACCTACGCAA GCACTCA TAGC TGAGTGC TCTGATTCAACCGGT DKAM_0580 542431 - 542150 - | Pyruvate synthase subunit porD TERM 190 542302 - 542314 + g 76 -7.7 -4.35483 | opp_overlap 542302 AGAGCCAGCAGATCA TGCAC TTC GTGCA TTTATTATGATCCAC DKAM_0581 542993 - 542436 - | Pyruvate synthase subunit porC DKAM_0582 543850 - 543152 - | alpha-glucosidase DKAM_0583 545583 - 544030 - | sodium-dependent transporter TERM 191 545101 - 545137 + g 90 -13.1 -3.63837 | TATCATGGGTATACT CCATGTGGCAAGCACCA TGC TGGTGTTAGCTATATGG TTATTGAAGAATTCT DKAM_0584 546993 - 545746 - | proton/glutamate symporter TERM 192 546055 - 546043 - G 83 -10.5 -3.7732 | opp_overlap 546043 CTGCGAGATGAATAA GGCGC TGA GCGCC TGGTATAAGGCTGTC TERM 193 546043 - 546055 + g 71 -10.5 -2.63301 | opp_overlap 546043 CTGCGAGATGAATAA GGCGC TGA GCGCC TGGTATAAGGCTGTC DKAM_0585 547538 - 547017 - | hypothetical protein DKAM_0586 548557 - 547535 - | putative RNA methylase, NOL1/NOP2/sun family TERM 194 548144 - 548111 - G 80 -9.5 -3.92373 | gap 1, opp_overlap 548138 548138 548140 GATTTGAGCCATAAA CGTTGCCT-TACCGCC TGG GGCGGCACAGGCGTCG AGGACGTCTCCTTCA TERM 195 548315 - 548335 + g 73 -10.5 -2.96598 | TGGTATTTCCTCTAA CTGGAATCC CAG GGATTCTAG TCTCTCCATTAATTC DKAM_0587 549264 - 548572 - | hypothetical protein DKAM_0588 550498 - 549299 - | phosphate transporter TERM 196 550414 - 550433 + g 79 -10.8 -3.55761 | overlap 550417 CACCTATGATTGTCC CAATGCTG TTTG CAGCATTG TTTGCCCCATCAATC DKAM_0589 551958 - 550849 - | Aminopeptidase from family M42 TERM 197 551191 - 551207 + g 72 -6.5 -4.21908 | overlap 551192 TGGACCATATCCTAG CCGAGTG AAC CACTCGC TTTTAGCTACTCCTG TERM 198 551192 - 551206 + g 71 -10 -3.12663 | overlap 551191 GGACCATATCCTAGC CGAGTG AAC CACTCG CTTTTAGCTACTCCT DKAM_0590 552660 - 552004 - | hypothetical protein DKAM_0591 553957 - 552731 - | Radical SAM domain protein DKAM_0592 554301 - 554026 - | MoaD family protein DKAM_0593 556207 - 554357 - | Aldehyde ferredoxin oxidoreductase TERM 199 555906 - 555923 + g 72 -9.1 -3.55622 | opp_overlap 555908 TTCGCACTTGCCACA GAGCCTG TAAG CGGGCTC TTTAAAGCCATTACA DKAM_0594 556449 - 557402 + | ATPase associated with various cellular activities, AAA_3 DKAM_0595 557399 - 558481 + | hypothetical protein DKAM_0596 558474 - 559574 + | hypothetical protein DKAM_0597 559571 - 559843 + | hypothetical protein DKAM_0598 559860 - 561323 + | hypothetical protein DKAM_0599 561324 - 562643 + | protein of unknown function DUF58 DKAM_0600 562713 - 563786 + | Linocin_M18 bacteriocin protein DKAM_0601 563794 - 564252 + | hypothetical protein TERM 200 564433 - 564387 - T 93 -12.3 -3.18264 | gap 2, overlap 564389 GCTCCCATCTACGAA GAGCCCTGCGGGGC--TTGGAGC AGT GCTCCCACCGCCCCGCAGGCTTC AACAACCTCTCCAAC TERM 201 564430 - 564389 - T 93 -12.4 -3.1552 | gap 3, overlap 564387 TCCCATCTACGAAGA GCCCTGCGGGGC--TTGGAGC AGT GCTCCCACCGCCCCGCAGG-C TTCAACAACCTCTCC TERM 202 564685 - 564664 - T 70 -5.1 -4.4773 | opp_overlap 564664, overlap 564659 TGACAGGAACTAAAA TAGTGGACG CAGG CAACCACTA TTTTTTCAACGACTC TERM 203 564664 - 564685 + T 70 -2.9 -5.0133 | opp_overlap 564659 564664 TGACAGGAACTAAAA TAGTGGACG CAGG CAACCACTA TTTTTTCAACGACTC DKAM_0602 565900 - 564683 - | beta-lactamase domain protein DKAM_0603 566635 - 565976 - | Peroxiredoxin DKAM_0604 566821 - 567048 + | hypothetical protein DKAM_0605 567077 - 568738 + | metal dependent phosphohydrolase DKAM_0606 568797 - 569573 + | dolichol-phosphate mannosyltransferase DKAM_0607 569647 - 572823 + | isoleucyl-tRNA synthetase DKAM_0608 572820 - 573221 + | cytidine deaminase DKAM_0609 573870 - 573205 - | Methyltransferase type 12 DKAM_0610 576338 - 573882 - | DNA double-strand break repair rad50 ATPase TERM 204 575642 - 575658 + g 75 -2.9 -5.19879 | overlap 575634 ATCTCTGCTTCTCTT CGAGTAG TTT CTCCTTG TTTTTGTCTTTAAGC DKAM_0611 578394 - 576355 - | DNA double-strand break repair protein mre11 TERM 205 577988 - 577998 + g 79 -3.2 -5.3236 | AGGTATGCTATGGTT GATG TAT CGTC TTTTTTCTCGCTTGT DKAM_0612 579710 - 578400 - | hypothetical protein DKAM_0613 581000 - 579717 - | DNA double-strand break repair protein mre11 DKAM_0614 582322 - 581054 - | threonine synthase DKAM_0615 583371 - 582445 - | ATP-dependent 6-phosphofructokinase DKAM_0616 584214 - 583396 - | fructose-bisphosphate aldolase DKAM_0617 584809 - 584300 - | Small multidrug export protein DKAM_0618 584981 - 586366 + | ABC transporter periplasmic binding protein DKAM_0619 586471 - 587982 + | Ribose ABC transporter, ATP-binding protein DKAM_0620 587984 - 589105 + | Ribose ABC transporter, permease protein DKAM_0621 589106 - 590044 + | Ribose ABC transporter, permease protein TERM 206 590051 - 590066 + T 91 -6.2 -5.4593 | opp_overlap 590051 ACAGTATAGCATATA GCTTTT ATCA AAAAGC TTTTTCTTCTTTTCC DKAM_0622 591772 - 590132 - | lysyl-tRNA synthetase DKAM_0623 591881 - 593020 + | major facilitator superfamily MFS_1 protein DKAM_0624 593109 - 596024 + | leucyl-tRNA synthetase TERM 207 597465 - 597454 - g 72 -3 -5.04175 | GTAATCATAGAAAAA TATG AGCT CATA GGTAAAAAAGGCTTT DKAM_0625 596188 - 597519 + | amidohydrolase DKAM_0626 597526 - 598137 + | multiple antibiotic resistance (MarC)-related protein DKAM_0627 598912 - 598127 - | Cation efflux protein DKAM_0628 599012 - 599245 + | ferredoxin DKAM_0629 599291 - 600523 + | succinyl-diaminopimelate desuccinylase TERM 208 600524 - 600507 - f 74 -6.3 -4.4195 | overlap 600495 AGAGATTTGAGAAAA TCCAGGT TGAT ACCTAGA ATTGAGTAGCGGGAG TERM 209 600949 - 600935 - f 73 -10 -2.99471 | TGACCCCCATATAGA GTGGTC AGT GACCAC AGTGAAGCACGGGGC TERM 210 601882 - 601849 - g 77 -9.1 -3.88291 | gap 1, opp_overlap 601841 601837, overlap 601876 601881 TATGAGGCTGAGAAA TCTTGCAACA-ATAGA GTT TCTATATGATGCAAGA AGTCGCAGTGTCTTC DKAM_0630 601070 - 602578 + | Carbamoyl-phosphate synthase L chain, ATP-binding DKAM_0631 602736 - 605228 + | phosphoenolpyruvate synthase DKAM_0632 605361 - 606692 + | hypothetical protein DKAM_0633 608210 - 606696 - | metallophosphoesterase, calcineurin superfamily TERM 211 609722 - 609696 - g 73 -2.3 -5.1101 | gap 2, overlap 609699 GTACCAGTTAAAAAA CTACGTGGTAAGC AGG GCAT-CCACG-AG AAGATTATTGAGGAG DKAM_0634 608331 - 609899 + | PilT protein domain protein DKAM_0635 610342 - 609902 - | holliday junction resolvase DKAM_0636 610614 - 610441 - | hypothetical protein DKAM_0637 610568 - 612664 + | metallophosphoesterase TERM 212 613361 - 613325 - g 74 -6 -4.60713 | opp_overlap 613325 CAAAACATTACAAAA CCCATATTAATGCA TGGACCGGG CGCAGTAATATGGG TTGATGATCAAGGGA TERM 213 614090 - 614067 - g 73 -11.1 -2.61383 | overlap 614066 614069 ATCCGGATGGAGAAG TATCAGCCC TATATG GGGCTGATA ATAAGCTTATAGTAG DKAM_0638 612743 - 614695 + | Membrane-anchored protein predicted to be involved in regulation of amylopullulanase-like protein TERM 214 615408 - 615394 - g 73 -10 -3.41234 | TATTAACCTAAGTAA GCCTGA GTT TCAGGC AATAAAATATGAGAT DKAM_0639 614849 - 616495 + | extracellular solute-binding protein, family 1 DKAM_0640 616666 - 618813 + | binding-protein-dependent transport systems inner membrane component DKAM_0641 618820 - 619905 + | ABC transporter related DKAM_0642 620461 - 619883 - | phosphodiesterase, MJ0936 family DKAM_0643 621254 - 620505 - | Mn2+-dependent serine/threonine protein kinase DKAM_0644 621554 - 621261 - | protein of unknown function DUF211 DKAM_0645 621845 - 622150 + | hypothetical protein DKAM_0646 622566 - 622186 - | transcriptional regulator, TrmB DKAM_0647 622841 - 623512 + | Phosphate transport regulator-like protein TERM 215 623895 - 623862 - g 85 -12.5 -3.36492 | opp_overlap 623874, overlap 623863 TGTTTAAGGGGATAA TGGTGAACCCAGG TGATGTAG CCTGGGTTCACCC AGGCATATACGACTA TERM 216 623894 - 623863 - g 90 -16 -2.61681 | opp_overlap 623874, overlap 623862 GTTTAAGGGGATAAT GGTGAACCCAGG TGATGTAG CCTGGGTTCACC CAGGCATATACGACT DKAM_0648 623546 - 624169 + | Nucleotidyl transferase TERM 217 624861 - 624873 + G 70 -4.8 -4.52803 | GTCTCGGGCTTTGAA CCAC TCGAT GTGG TTTTATCCATTTATA DKAM_0649 624180 - 625307 + | hydrogenase formation HypD protein TERM 218 626028 - 626049 + G 73 -10.2 -3.08992 | opp_overlap 626028 TAGGAGTTAGACACA TCAGGCTG GGAAAG CAGCCTGA TATATTGGCATACAT TERM 219 626049 - 626028 - g 73 -10.2 -3.01416 | opp_overlap 626028 TAGGAGTTAGACACA TCAGGCTG GGAAAG CAGCCTGA TATATTGGCATACAT DKAM_0650 625307 - 626872 + | Radical SAM domain protein DKAM_0651 628654 - 626876 - | Orn/DAP/Arg decarboxylase 2 DKAM_0652 628983 - 628705 - | hypothetical protein TERM 220 628869 - 628883 + g 73 -4.2 -4.90266 | opp_overlap 628869, overlap 628871 AATCACTTGAATCAA TGCTGG ACT CCAGGA TTTTTAATTCCTCGA DKAM_0653 629175 - 629600 + | putative transcriptional regulator, CopG family DKAM_0654 630017 - 629643 - | iron dependent repressor DKAM_0655 630766 - 630029 - | glutaredoxin-like protein TERM 221 630777 - 630794 + H 77 -4.9 -4.96996 | CCCATCGTAATCACC TGTTAGG CCCA TCTAACA TTTATTTTATTTAAC TERM 222 631118 - 631098 - g 74 -3.3 -4.98103 | TAACAAAACAGAAAA CAATATCCC CAC AGAATACTG CACAGGAGAAACAAG TERM 223 631329 - 631313 - g 74 -3.7 -5.09259 | overlap 631315 GAGGTTAAAATAAAA GATCTTG ATG CAAGATT AACGAGCCTAGAGAA DKAM_0656 630905 - 631690 + | hypothetical protein DKAM_0657 632813 - 631719 - | wyosine base formation DKAM_0658 632965 - 633486 + | biotin/lipoyl attachment domain-containing protein DKAM_0659 633926 - 633804 - | hypothetical protein DKAM_0660 635680 - 634115 - | carboxyl transferase TERM 224 635333 - 635343 + g 72 -5.4 -4.39426 | overlap 635322 GATGGCTAGCTCGAT TAGC CTA GCTA TTTTCTCACCATGTA DKAM_0661 636846 - 635671 - | Thiolase DKAM_0662 637433 - 637104 - | hypothetical protein DKAM_0663 637902 - 637426 - | single-strand DNA-binding protein TERM 225 637665 - 637677 + g 93 -9.1 -4.82901 | CTGCGTCTCCCTCTT GCAGG GTA CCTGC TTTTTCTCCCCACAG DKAM_0664 638446 - 637949 - | endonuclease III (nth1) TERM 226 638151 - 638165 + gr 76 -5 -4.77036 | overlap 638148 GATAAAGCGGCCTCA CAGTCA CCG TGATTG TTTTTAATAATGAAG DKAM_0665 638807 - 638415 - | DUF296 domain containing protein DKAM_0666 638858 - 638974 + | hypothetical protein DKAM_0667 638967 - 640088 + | ATPase associated with various cellular activities, AAA_5 DKAM_0668 640085 - 641365 + | Uncharacterized protein containing a von Willebrand factor type A (vWA) domain DKAM_0669 641799 - 643028 + | Alanine glyoxylate transaminase DKAM_0670 643747 - 643082 - | phosphate transport system-like protein DKAM_0671 644352 - 643819 - | hypothetical protein DKAM_0672 644423 - 644701 + | hypothetical protein DKAM_0673 644698 - 645540 + | Xanthine and CO dehydrogenases maturation factor DKAM_0674 645670 - 646167 + | hypothetical protein TERM 227 647201 - 647222 + G 70 -9.5 -3.0752 | gap 1, opp_overlap 647194 CTCATAATGCCGGCT GTGCTAGCGG AAT CC-CTAGCAC TCTTAGACTCGTATG DKAM_0675 646652 - 647515 + | 6-phosphogluconate dehydrogenase, NAD-binding TERM 228 648095 - 648117 + G 71 -10.6 -2.73159 | overlap 648094 ATTATAGGGCCTGTG CTTGCCAGGA AGC TCCTAGCAAG GTTTAAGACCCTTAA DKAM_0676 647540 - 648256 + | ERCC4 domain protein DKAM_0677 648260 - 649264 + | glycosyl transferase, family 4 DKAM_0678 649567 - 649277 - | hypothetical protein DKAM_0679 649765 - 649932 + | hypothetical protein DKAM_0680 650057 - 649929 - | hypothetical protein DKAM_0681 650283 - 650639 + | IS element ISDka2 orfA TERM 229 651832 - 651794 - g 90 -13.9 -3.40299 | gap 1, overlap 651801 CTAGTAGACGCAGAA CCCATAACCCCGAGCCCC GGGA GGGG-TAGGGGTAATGGG CCGGAGACCCGGCCC TERM 230 651929 - 651883 - g 100 -16.4 -3.61178 | GGGATGTAGCCCAAA CCTCCCAGCCCTAACGAGCGGA ACC CCCGCCCTAAAGGGCGGGGAGG AGGTCAGAGGGCGCT DKAM_0682 650651 - 651964 + | IS element ISDka2 orfB TERM 231 651939 - 651968 + T 74 -9.3 -3.28712 | gap 1 GGGAGGAGGTCAGAG GGCGCTTTGAGGAG ATA CTCCT-GTAGCGCC TTGTAAACCCGAACA DKAM_0683 652319 - 652143 - | hypothetical protein DKAM_0684 655181 - 652497 - | Cation transport ATPase DKAM_0685 656063 - 655650 - | thioesterase family protein TERM 232 656614 - 656602 - g 77 -9.1 -3.90586 | opp_overlap 656598 ATACGAGTTCATAAA GGCTG TAC CAGCC TGGATACTCTGGACA DKAM_0686 656435 - 656695 + | hypothetical protein DKAM_0687 658808 - 656706 - | MCM family protein DKAM_0688 659406 - 658801 - | Protein of unknown function DUF1288 DKAM_0689 659483 - 660463 + | replication factor C small subunit DKAM_0690 660467 - 661747 + | replication factor C large subunit DKAM_0691 663198 - 661750 - | Thiamine biosynthesis/tRNA modification protein ThiI DKAM_0692 663592 - 664323 + | DUF432 domain containing protein DKAM_0693 664325 - 665155 + | MscS Mechanosensitive ion channel DKAM_0694 665254 - 665907 + | hypothetical protein DKAM_0695 667218 - 666451 - | hypothetical protein TERM 233 666497 - 666522 + g 72 -10.6 -2.83715 | opp_overlap 666503, overlap 666499 666501 666503 ACTTCAATCATCCCG GAGATATACG TAATAC CGTATATCTC TATACTCCTGGTGAA DKAM_0696 667589 - 667215 - | hypothetical protein DKAM_0697 669052 - 667628 - | hypothetical protein DKAM_0698 670296 - 669049 - | Flagella-related protein I TERM 234 670340 - 670298 - R 71 -9.2 -2.96274 | gap 1, opp_overlap 670308 TCTGCGACAATCATA CCAGTGTCCCGGGAGGAGA TCCCAT TCTCCTCT-GGATCACTGG ATCCGGGCCAGCATC DKAM_0699 670869 - 670447 - | FlaG_arch domain containing protein, Archaeal flagellar protein G DKAM_0700 672611 - 671019 - | hypothetical protein DKAM_0701 672725 - 673288 + | Protein of unknown function (DUF996) DKAM_0702 673487 - 673612 + | hypothetical protein DKAM_0703 673575 - 673727 + | hypothetical protein DKAM_0704 675666 - 673738 - | putative TraG protein DKAM_0705 675955 - 675680 - | hypothetical protein DKAM_0706 676011 - 677834 + | putative TrbE protein DKAM_0707 677840 - 678169 + | hypothetical protein DKAM_0708 678365 - 678826 + | hypothetical protein DKAM_0709 678796 - 678957 + | hypothetical protein DKAM_0710 681431 - 679359 - | raffinose synthase TERM 235 680220 - 680235 + g 74 -10.4 -3.29144 | CTCAATGCTCCTAGA GGCCTC AGCC GAGGCC TTGTCGCCCAGATAC TERM 236 680503 - 680480 - G 74 -10.4 -3.12847 | AACCGGTATACCTAA TCCCCATGTT CTTC AACATGGAGA CAGTGTTGCTGAGGC TERM 237 680631 - 680618 - G 72 -6.7 -4.2828 | opp_overlap 680617 680618 680620 CGTCATCTATTAAAA CCCAT TTCA ATGGG ATGTCTTTCCCGAGG TERM 238 680740 - 680755 + g 70 -9 -3.31144 | opp_overlap 680736 CCATTCATGAAGACG GGGAGA CGCT TCTCCC TTCTAAGCCTGAAGC DKAM_0711 681461 - 682912 + | Putative transporter DKAM_0712 683022 - 683957 + | putative formamidase (formamide amidohydrolase) DKAM_0713 684741 - 683959 - | putative thiazole biosynthetic enzyme TERM 239 685764 - 685746 - g 74 -8.1 -3.99592 | overlap 685747 AGCTAGGATCATAAA CCCCCTG TACGC CAGGGGA ATAAAAGACGTTGTA DKAM_0714 684814 - 686178 + | phosphomethylpyrimidine kinase DKAM_0715 688375 - 686402 - | molybdenum cofactor synthesis domain protein DKAM_0716 688431 - 690584 + | DEAD/DEAH box helicase domain protein DKAM_0717 690624 - 691325 + | Probable uracil phosphoribosyltransferase DKAM_0718 692015 - 691287 - | nucleotide-binding protein, mrp/nbp35 family DKAM_0719 692401 - 692012 - | Probable hydrogenase nickel incorporation protein DKAM_0720 692469 - 693752 + | hydroxymethylglutaryl-CoA reductase, degradative DKAM_0721 693972 - 694790 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase DKAM_0722 695786 - 694821 - | ATPase, PP-loop superfamily DKAM_0723 695940 - 695779 - | hypothetical protein DKAM_0724 696520 - 696092 - | hypothetical protein TERM 240 696144 - 696171 + g 90 -14.2 -3.35371 | opp_overlap 696144 GGCTCACCGGAGACA GGGATGGGGTGG CATG CTACCCTATCCC TTAATTCAAGATGTA DKAM_0725 697236 - 696538 - | Branched-chain acyl-CoA synthetase (ADP-forming) beta subunit / acetyl-CoA synthetase (ADP-forming) beta subunit DKAM_0726 697435 - 699339 + | iindolepyruvate ferredoxin oxidoreductase, alpha subunit DKAM_0727 699346 - 699939 + | iindolepyruvate ferredoxin oxidoreductase, beta subunit DKAM_0728 700204 - 700680 + | flavodoxin TERM 241 700760 - 700746 - f 76 -7 -4.43477 | overlap 700747 GGGAGTGAATGAAAA CGGGCC TCT GGCCCC GGGACATCACAATGA TERM 242 700759 - 700747 - f 78 -10.5 -3.25604 | overlap 700746 GGAGTGAATGAAAAC GGGCC TCT GGCCC CGGGACATCACAATG DKAM_0729 700920 - 701051 + | hypothetical protein DKAM_0730 701114 - 702697 + | predicted metal-dependent hydrolase with the TIM-barrel fold DKAM_0731 702822 - 702694 - | hypothetical protein DKAM_0732 703000 - 702794 - | Aminotransferase, class III DKAM_0733 703323 - 703171 - | hypothetical protein DKAM_0734 703984 - 703724 - | thiamineS protein DKAM_0735 704469 - 704008 - | Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS - like protein DKAM_0736 705374 - 704469 - | aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM - like protein DKAM_0737 707713 - 705371 - | Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL- like protein DKAM_0738 708175 - 707714 - | Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS - like protein DKAM_0739 709077 - 708175 - | molybdopterin dehydrogenase FAD-binding DKAM_0740 711406 - 709064 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding DKAM_0741 711479 - 712828 + | putative allantoinase TERM 243 713147 - 713126 - g 80 -12.3 -2.95388 | opp_overlap 713125 713124, overlap 713122 GAGCCAAGGGAGAGA GCCCTGAGG ACAC CCTCAGGAC AGTTGATAGCTACGA DKAM_0742 712864 - 713787 + | aspartate carbamoyltransferase catalytic subunit TERM 244 713816 - 713798 - T 70 -7.6 -3.68619 | TCTAATCGATGCAAA TTTAAATC ATG GATTTAAA GATAAATAGAGTTTT DKAM_0743 714189 - 714037 - | hypothetical protein DKAM_0744 714642 - 714235 - | Putative transcriptional regulatory protein TERM 245 715770 - 715787 + G 70 -9.9 -3.07443 | TATGTTATTGGATGC GTTGGAG GAGG CTCCAAC TTCGCTGGGCTCTCA DKAM_0745 714981 - 716267 + | tryptophan synthase subunit beta DKAM_0746 716452 - 718077 + | Amino acid transporter, putative DKAM_0747 720035 - 718365 - | hypothetical protein DKAM_0748 720146 - 720835 + | Glycerol-3-phosphate cytidylyltransferase DKAM_0749 721560 - 720832 - | NADPH-dependent FMN reductase DKAM_0750 721652 - 722158 + | ADP-ribose pyrophosphatase TERM 246 722330 - 722304 - g 72 -9.4 -3.55548 | opp_overlap 722306, overlap 722306 CAATAGTGCTTCAAA TATACCAGCCTG CCA CAGGCGGGTATT TCAACCTGGGCGAAT TERM 247 722328 - 722306 - g 82 -12 -3.35224 | opp_overlap 722306, overlap 722304 ATAGTGCTTCAAATA TACCAGCCTG CCA CAGGCGGGTA TTTCAACCTGGGCGA TERM 248 722306 - 722328 + G 86 -12 -3.57144 | opp_overlap 722304 722306 ATAGTGCTTCAAATA TACCAGCCTG CCA CAGGCGGGTA TTTCAACCTGGGCGA DKAM_0751 722231 - 722932 + | hypothetical protein DKAM_0752 722974 - 724269 + | ABC transporter related DKAM_0753 724274 - 724993 + | hypothetical protein DKAM_0754 727418 - 725130 - | DEAD/DEAH box helicase domain protein DKAM_0755 727524 - 728933 + | peptidase U62, modulator of DNA gyrase TERM 249 729943 - 729957 + G 75 -11.4 -3.03338 | overlap 729955 GCGTTCACCCGGTAG CCCGGT GCA ACCGGG TGTTACCAACCTTAT TERM 250 730019 - 730000 - g 79 -10.8 -3.6502 | TAGGGGTGATTTAAA CAGCTTCA TTAA TGAAGCTG GGAGAGCGCTAGTGG DKAM_0756 728936 - 730279 + | peptidase U62, modulator of DNA gyrase DKAM_0757 731190 - 730285 - | biotin--acetyl-CoA-carboxylase ligase TERM 251 730412 - 730425 + g 70 -5.3 -4.44245 | ATTTCACCACTGCTT GTCAT AGCT ATGAC TTTTCTACCTAGTGT DKAM_0758 731862 - 731191 - | UPF0153 domain containing protein DKAM_0759 732428 - 731880 - | cytidyltransferase-related domain protein DKAM_0760 733216 - 732488 - | anion transporter DKAM_0761 733913 - 733200 - | anion transporter DKAM_0762 734290 - 734409 + | hypothetical protein DKAM_0763 734442 - 734639 + | hypothetical protein DKAM_0764 734710 - 734910 + | Helix-turn-helix, type 11 domain protein TERM 252 735775 - 735750 - g 70 -9.1 -3.36785 | opp_overlap 735754 GGAGAGTTTAAGCAA TACATGATTGC CAAG GCAAGCATGTA TGAGCACGTATACTA DKAM_0765 734988 - 736541 + | metal-dependent phosphohydrolase, HD region DKAM_0766 736557 - 736808 + | hypothetical protein DKAM_0767 736821 - 737243 + | hypothetical protein DKAM_0768 737240 - 737638 + | hypothetical protein TERM 253 737736 - 737755 + T 70 -9.2 -2.7814 | overlap 737735 TAATTGCTTGCCTCA CCCCGCCA TAAA TGGCGAGG CTTTCAGCTGTAAAT DKAM_0769 738641 - 737781 - | hypothetical protein TERM 254 738777 - 738762 - H 70 -5.4 -4.57569 | gap 1, opp_overlap 738766 738771, overlap 738763 738766 CCATTCCTCCAAAAA GCATCGG AAG CCG-TGC CTGCGTTGTTTATAG TERM 255 738884 - 738911 + H 100 -14.3 -3.20703 | opp_overlap 738902 738903, overlap 738904 GGGGCTTCCGCCTCG CCCATAGGGAT AAGCAA ATCCCTATGGG TTCATGGGTGGTTGT TERM 256 738963 - 739003 + G 74 -5.4 -4.56597 | gap 2 CCCATCTAGGGTTAC CCGACCCGGG--ATTGGAGC AAC GCTCCCATTGCCCAGGTGGG TTTTTGAGGAGGGGG DKAM_0770 738907 - 739035 + | hypothetical protein TERM 257 739340 - 739380 + F 74 -9.4 -3.31515 | gap 1, opp_overlap 739359, overlap 739343 CTTTCGTAAATTTTA TATTTACACCTCAAAAAAA CTCA TTATTTTGAGGTGT-AATA TTGTGAGGCATGTTT TERM 258 739343 - 739378 + F 100 -13.6 -3.22102 | opp_overlap 739359, overlap 739340 TCGTAAATTTTATAT TTACACCTCAAAAAAA CTCA TTATTTTGAGGTGTAA TATTGTGAGGCATGT TERM 259 739372 - 739359 - f 78 -2.4 -5.45726 | opp_overlap 739343 739340 TACACCTCAAAAAAA CTCA TTATTT TGAG GTGTAATATTGTGAG DKAM_0771 739383 - 740039 + | hypothetical protein TERM 260 740467 - 740451 - T 71 -9.3 -3.05715 | opp_overlap 740427 740451 740452 AAGCTGTGGACTTAA GCCCGGG TTT CCCGGGT CTTCTTCTCACTCTC TERM 261 740451 - 740468 + T 78 -9.1 -3.83568 | gap 1, opp_overlap 740451, overlap 740427 740452 AAGCTGTGGACTTAA G-CCCGGG TTT CCCGGGTC TTCTTCTCACTCTCC TERM 262 740452 - 740466 + T 100 -12.8 -3.4997 | opp_overlap 740451, overlap 740427 740451 AGCTGTGGACTTAAG CCCGGG TTT CCCGGG TCTTCTTCTCACTCT DKAM_0772 741388 - 740447 - | hypothetical protein TERM 263 740665 - 740700 + g 87 -10.5 -4.19258 | TTAGAGCTGGCTCCG GCCTTAGGTTGTAGT AGACCC ACTTCAACCTCAGGC TTTTGAATAGAGTGT DKAM_0773 742287 - 741415 - | hypothetical protein DKAM_0774 744110 - 742281 - | CRISPR-associated ATP-dependent RNA helicase-like protein TERM 264 743061 - 743079 + g 74 -10.2 -3.2963 | CTCTCTACACAGTCT CCCGGCTC TTT GAGCCAGG TTCTCCAGGGGTGCT DKAM_0775 745283 - 744132 - | hypothetical protein DKAM_0776 746184 - 745276 - | CRISPR-associated protein Cas5 DKAM_0777 747262 - 746198 - | CRISPR-associated autoregulator, DevR family TERM 265 746308 - 746324 + g 81 -8.7 -4.37527 | TATGTTCATTTTTGA TCTCGGG CTC CTCGAGA TTTTCATCATTGTAG TERM 266 746444 - 746464 + g 70 -9.7 -3.01791 | opp_overlap 746444 746449 TGAGCTAGGTACGAA CTCAACAGG TCC CCTGCTGAG TGTTACAACAGCGCT TERM 267 746464 - 746444 - G 79 -11.9 -3.18912 | opp_overlap 746444, overlap 746449 TGAGCTAGGTACGAA CTCAACAGG TCC CCTGCTGAG TGTTACAACAGCGCT TERM 268 746912 - 746935 + g 72 -5.1 -4.62669 | overlap 746914 GAAGGCACTCTCCAG CCCGTCGGG GTTCAG CCCGTCGAG TTTATTATTTAGTTC DKAM_0778 747649 - 747266 - | hypothetical protein DKAM_0779 748429 - 747797 - | CRISPR-associated HTH regulatory protein, Csa3 family TERM 269 747946 - 747966 + g 72 -3.2 -5.00923 | ATATCTCCATGAATG TCGCGTTG TCTAT CAGCTCGA TTTTATTTAATATTT TERM 270 748406 - 748424 + g 70 -8.8 -3.43774 | opp_overlap 748403, overlap 748409 GTCTATGTCAAACCC GAAGCTGG CAA CCAGCGTC TTCACTTTTCTCTCC DKAM_0780 749031 - 748510 - | DUF83 domain containing protein DKAM_0781 749315 - 749028 - | CRISPR-associated protein Cas2 DKAM_0782 750304 - 749318 - | CRISPR-associated protein Cas1 DKAM_0783 751143 - 750301 - | CRISPR-associated protein, Csa1 family DKAM_0784 751894 - 751256 - | CRISPR locus-related DNA-binding protein TERM 271 751342 - 751362 + g 76 -4.7 -4.78848 | overlap 751343 CCCTGCTCTTGAGCT TCGTGAG AGTGTTC CTCACGG TTTTCTCTTTGACCC TERM 272 751956 - 751938 - H 71 -4.5 -4.60889 | AACCAGGCTTAAAAA TCCCAAG CATGC CATGGGA ATAAAAGAAAACTGA TERM 273 752612 - 752580 - H 89 -12.1 -3.31183 | overlap 752575 AGAATTGAAAGTCAA CCTTCTAAGGACGTC TAT AACGTCCTTAGAGAG AGATACGGAATACAA TERM 274 754231 - 754208 - H 74 -6.8 -4.35348 | opp_overlap 754229, overlap 754204 754211 AGAATACAATAGAAA GAATTGAAAG ACTG CTTTCAACCC TCCCGTTAGGGTCTT TERM 275 754228 - 754211 - H 75 -7.1 -4.25957 | overlap 754208 754204 ATACAATAGAAAGAA TTGAAAG ACTG CTTTCAA CCCTCCCGTTAGGGT DKAM_0785 754812 - 754928 + | hypothetical protein DKAM_0786 759076 - 758207 - | hypothetical protein DKAM_0787 762045 - 759265 - | CRISPR-associated protein, Crm2 family TERM 276 761953 - 761965 + g 87 -10.5 -4.17958 | TCCTGCCTTGTAAGC CGCGG TCA CCGCG TTTCTTAGGCCTCTT DKAM_0788 763177 - 762359 - | CRISPR-associated RAMP protein, Cmr6 family DKAM_0789 764532 - 763318 - | CRISPR-associated RAMP protein, Cmr1 family TERM 277 764410 - 764422 + g 70 -4.7 -4.46514 | opp_overlap 764396 CGCTCTAGCCCACCA GCGCC ACA GGCCC TTTATTTCCGTAGGT DKAM_0790 765008 - 764538 - | CRISPR-associated RAMP protein, Cmr5 family DKAM_0791 766020 - 765022 - | CRISPR-associated RAMP protein, Cmr4 family TERM 278 765363 - 765373 + g 74 -6.8 -4.27316 | CGGCTTTCTTTATGT CCTC CGG GAGG TTTTCGATTAGCCAC TERM 279 765577 - 765587 + g 72 -5.4 -4.48987 | opp_overlap 765576 765577 GTACCTAGAAAATAC CTCT AGG AGAG TTTTCGTTGTAACGA DKAM_0792 767855 - 766395 - | CRISPR-associated (Cas) DxTHG family protein DKAM_0793 768482 - 768601 + | hypothetical protein TERM 280 768754 - 768741 - Tf 73 -5.3 -4.58663 | AGCAGTTGTGAAAAA TCGAA AATT TTCGA GGTCAACTAGCTATA DKAM_0794 769594 - 768845 - | putative CRISPR-associated protein, APE2256 family DKAM_0795 769583 - 769705 + | hypothetical protein TERM 281 769743 - 769726 - TR 73 -2.5 -5.12474 | CAGAAGAGATAAAAA CCGTTGC GCCC GCCGCGG AGCCGAATTTTACGG DKAM_0796 770294 - 769875 - | hypothetical protein DKAM_0797 770396 - 771265 + | hypothetical protein DKAM_0798 771516 - 771295 - | hypothetical protein DKAM_0799 771649 - 771954 + | deoxyribonuclease/rho motif-related TRAM DKAM_0800 771938 - 772279 + | hypothetical protein DKAM_0801 772771 - 772283 - | protein of unknown function DUF355 TERM 282 773034 - 773005 - g 70 -9.2 -3.36289 | GAGCAGGGTAATGAA GGCCTACTCGAG AAGATG CTCGAGATGGCC GGCAACCAGTTAACC DKAM_0802 772855 - 773502 + | hypothetical protein DKAM_0803 773515 - 774237 + | purine and other phosphorylase, family 1 DKAM_0804 774242 - 775687 + | cysteinyl-tRNA synthetase DKAM_0805 775684 - 776385 + | endonuclease (RecB family)-like protein DKAM_0806 777517 - 776372 - | DNA photolyase TERM 283 778093 - 778080 - gH 74 -8.1 -3.87869 | opp_overlap 778091 TGAACGGGGTAGAAA CAGCC TGAC GGCTG AGACCCACAGTGGTT DKAM_0807 777649 - 778248 + | hypothetical protein DKAM_0808 778217 - 778864 + | phosphoserine phosphatase DKAM_0809 779195 - 778845 - | Predicted transcriptional regulator consisting of an HTH domain fused to a Zn-ribbon DKAM_0810 779592 - 779245 - | hypothetical protein DKAM_0811 780839 - 779649 - | N2,N2-dimethylguanosine tRNA methyltransferase TERM 284 780032 - 779995 - G 74 -10.8 -3.13403 | opp_overlap 779999 780004, overlap 779997 780004 TTCTCGTTATTAATA CATGTTAAATCCCTGG CTTCAT CCAGGGATTTAATATA TCCTCTTTCCAGTGT TERM 285 780030 - 779997 - G 77 -11.2 -3.12895 | opp_overlap 779999 780004, overlap 779995 780004 CTCGTTATTAATACA TGTTAAATCCCTGG CTTCAT CCAGGGATTTAATA TATCCTCTTTCCAGT TERM 286 779999 - 780028 + g 85 -13.8 -3.0362 | opp_overlap 779997 779995 780004, overlap 780004 CGTTATTAATACATG TTAAATCCCTGG CTTCAT CCAGGGATTTAA TATATCCTCTTTCCA TERM 287 780023 - 780004 - G 76 -9.3 -3.66883 | opp_overlap 780004 779999, overlap 779997 779995 TTAATACATGTTAAA TCCCTGG CTTCAT CCAGGGA TTTAATATATCCTCT TERM 288 780004 - 780023 + g 77 -9.3 -3.90358 | opp_overlap 779997 779995 780004, overlap 779999 TTAATACATGTTAAA TCCCTGG CTTCAT CCAGGGA TTTAATATATCCTCT DKAM_0812 781438 - 780890 - | Predicted nucleotide kinase TERM 289 780973 - 780984 + g 72 -3 -5.03314 | GCTCCCTGTTCTCCA TAGT TAAC ACTA TTTTTTCGGCGTCAC DKAM_0813 782447 - 781557 - | Predicted transcriptional regulator DKAM_0814 783227 - 782514 - | Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase TERM 290 782686 - 782660 - G 77 -11 -3.25823 | opp_overlap 782658 CCTTTGTCACATCAA TGCTTCTAGC CTTTATT GCTAGAAGCA AGTATCCTCCATCCC DKAM_0815 784489 - 783224 - | Pre-mRNA processing ribonucleoprotein, binding region TERM 291 783562 - 783577 + g 78 -5.4 -4.82901 | CCTGTATGGTGCTTG CTGGCA GGAC TGCTAG TTTTTCTAGCCCCCC DKAM_0816 784534 - 784686 + | Ribosomal_S30 domain containing protein TERM 292 784706 - 784696 - T 70 -2.6 -5.03994 | GCTTAGAGATAAAAA TTAT TCT ATAA CGAGTTTCTTACCTA DKAM_0817 785661 - 784696 - | NAD-dependent epimerase/dehydratase DKAM_0818 786866 - 785676 - | pyridoxal phosphate-dependent acyltransferase, putative DKAM_0819 787061 - 788416 + | glutamyl-tRNA(Gln) amidotransferase subunit D DKAM_0820 788409 - 790325 + | glutamyl-tRNA(Gln) amidotransferase subunit E TERM 293 790719 - 790701 - g 82 -6 -5.12971 | overlap 790702 AAGAGGCAATAAAAA GTGTTCTC GCT GAGAACAA GTACAAGGTCATAGT TERM 294 790718 - 790702 - g 79 -9.5 -3.66156 | overlap 790701 AGAGGCAATAAAAAG TGTTCTC GCT GAGAACA AGTACAAGGTCATAG DKAM_0821 790667 - 791017 + | hypothetical protein DKAM_0822 791052 - 791951 + | hypothetical protein DKAM_0823 792083 - 792481 + | translation initiation factor IF-5A TERM 295 792489 - 792504 + T 74 -6.1 -4.57569 | CCCGCTAGATGTCAT CCGGT AGGAAA ACCGG TTTTTCAGCAAGTGA DKAM_0824 792831 - 792478 - | hypothetical protein TERM 296 792546 - 792566 + g 81 -4.7 -5.1675 | TAGCTATGCCTGGCC TAGGGCTCT TGG AGAACTCTA TTTTTTCATCACTGG DKAM_0825 793784 - 792879 - | amidohydrolase-like protein DKAM_0826 797770 - 793766 - | reverse gyrase TERM 297 797108 - 797128 + g 88 -3.9 -5.75538 | GAAGTCTCCCTCCTT GAGCCTGGT TAA AGCAGCCTC TTTTTCTTTTTTACC DKAM_0827 799282 - 797828 - | Sodium/solute symporter DKAM_0828 799442 - 799275 - | hypothetical protein TERM 298 799570 - 799550 - g 79 -9.8 -3.8211 | GTTTACGGAGAACAA TACTGGAG CTACT CTCCAGTA TGCAGGGCAGGGAGA DKAM_0829 799525 - 800544 + | transcriptional regulator MarR family TERM 299 801229 - 801212 - g 81 -12.7 -3.12138 | overlap 801208 801206 GAAAAAGGATACATA GTCCCCG GTCT CGGGGAC GCTGGAGATAGGGCA DKAM_0830 800591 - 801256 + | uracil phosphoribosyltransferase TERM 300 801266 - 801240 - T 95 -13.8 -2.87931 | opp_overlap 801239 GGGACGCTGGAGATA GGGCATTCGGCT CTT AGCCAAATACCC GTGTAATCCACTCCA DKAM_0831 801990 - 801253 - | putative sugar-phosphate nucleotidyl transferase DKAM_0832 803388 - 802045 - | MATE efflux family protein DKAM_0833 804377 - 803388 - | hypothetical protein TERM 301 805030 - 805053 + G 74 -6.8 -4.21827 | gap 1 TAGACTTCATAGCCT CTATACTG-GC ATC GCTCGGTATAG TTTTAACGTATTTAA DKAM_0834 804528 - 805475 + | Cation efflux system protein TERM 302 805493 - 805508 + T 78 -9 -3.75863 | opp_overlap 805492 805493 TTCGTGAGGCATAAT GCAGTG TCTC CACTGC TTTAATAACCGTTTT DKAM_0835 805824 - 805525 - | hypothetical protein TERM 303 805608 - 805620 + gT 76 -9.1 -3.67141 | opp_overlap 805607 805608 ATCCCTGTTTTAAAT CGCTG AGG CAGCG TTTAACTAGCCTTAT DKAM_0836 806653 - 805799 - | hypothetical protein DKAM_0837 807582 - 806656 - | ATP-dependent 6-phosphofructokinase DKAM_0838 808454 - 807600 - | uridine phosphorylase DKAM_0839 809010 - 808474 - | phosphodiesterase, MJ0936 family DKAM_0840 809635 - 809057 - | Small heat shock protein Hsp20 DKAM_0841 809728 - 810153 + | UPF0047 domain containing protein DKAM_0842 810155 - 811330 + | Quinolinate phosphoribosyl transferase DKAM_0843 812016 - 811333 - | hypothetical protein DKAM_0844 812068 - 813069 + | hypothetical protein TERM 304 813648 - 813624 - g 77 -7.2 -4.3898 | ATTAGCTTCAGAAAA CTTCTACGTG ATCTA CACCTAGAAG CTCCATCTTTCTAAA DKAM_0845 813066 - 813662 + | phosphoesterase DKAM_0846 813778 - 815193 + | Acetyl-CoA synthetase DKAM_0847 815494 - 815168 - | methionyl-tRNA synthetase, beta subunit DKAM_0848 816178 - 815516 - | TYW3 domain containing protein DKAM_0849 817014 - 816334 - | sodium:dicarboxylate symporter DKAM_0850 817113 - 817226 + | hypothetical protein DKAM_0851 818589 - 817549 - | hypothetical protein DKAM_0852 819191 - 818994 - | hypothetical protein DKAM_0853 819513 - 820331 + | tRNA_deacylase domain containing protein DKAM_0854 821383 - 820328 - | hypothetical protein DKAM_0855 821643 - 821786 + | hypothetical protein DKAM_0856 822018 - 821800 - | ferredoxin--NADP(+) reductase subunit alpha DKAM_0857 822943 - 823884 + | phosphoglycerate dehydrogenase DKAM_0858 823887 - 824654 + | ParB domain protein nuclease TERM 305 825428 - 825406 - T 82 -10.6 -3.61398 | opp_overlap 825381 825389, overlap 825380 GTTGTTCGCGAACAA CGGGAACAAG TGG CTTGTTCACG AACGTTCGCATTGAA DKAM_0859 825879 - 825625 - | hypothetical protein DKAM_0860 827058 - 825967 - | peptide chain release factor 1 DKAM_0861 827157 - 828152 + | predicted integral membrane protein TERM 306 828184 - 828197 + T 71 -6.7 -4.16016 | TAAGTGGCTTTTGTA GCTGT TCTA ACAGC TTTCTTAGGACGTAG DKAM_0862 828344 - 828168 - | 50S ribosomal protein L40e DKAM_0863 828968 - 828414 - | hypothetical protein DKAM_0864 829070 - 829729 + | Endonuclease V DKAM_0865 831063 - 830149 - | Peptide ABC transporter, permease protein DKAM_0866 832034 - 831060 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease component DKAM_0867 833773 - 832031 - | Oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein DKAM_0868 833903 - 834592 + | Conserved archaeal protein, aspartokinase domain protein TERM 307 835076 - 835092 + G 73 -10.9 -2.71364 | opp_overlap 835065 GACACCAGTATTACC TGGTGTC AGT GACACCA TGGTTAGGAGGCTCA DKAM_0869 834714 - 835238 + | Nicotinamide-nucleotide adenylyltransferase DKAM_0870 835235 - 835984 + | molybdopterin binding domain containing protein DKAM_0871 836187 - 835981 - | hypothetical protein DKAM_0872 837330 - 836278 - | peptidase, putative DKAM_0873 837925 - 837428 - | transcriptional regulators-like protein TERM 308 837505 - 837515 + g 71 -6.8 -4.09108 | CTGCTAGCCGTGTCT CCAG TTC CTGG TTTCTCTGCCTTAAC DKAM_0874 838272 - 838141 - | hypothetical protein DKAM_0875 838421 - 838591 + | hypothetical protein DKAM_0876 840157 - 838793 - | major facilitator superfamily MFS_1 DKAM_0877 841062 - 840154 - | Hydrolases of the alpha/beta superfamily DKAM_0878 841144 - 841878 + | glycerophosphoryl diester phosphodiesterase DKAM_0879 842266 - 841892 - | DUF1667 domain containing protein DKAM_0880 843519 - 842263 - | NADH oxidase DKAM_0881 844999 - 843521 - | Glycerol-3-phosphate dehydrogenase DKAM_0882 846632 - 845058 - | glycerol kinase TERM 309 845761 - 845747 - G 72 -5.6 -4.53303 | opp_overlap 845747 CATGCTTAGAGAAAA CTGGTG TAG CCCCAG TGTTAACCAGTATGA DKAM_0883 846724 - 847578 + | alpha/beta hydrolase fold protein DKAM_0884 848899 - 847886 - | hypothetical protein DKAM_0885 850049 - 848889 - | signal peptidase type I DKAM_0886 850800 - 850123 - | hypothetical protein DKAM_0887 851481 - 850918 - | hypothetical protein DKAM_0888 852187 - 851582 - | hypothetical protein DKAM_0889 852876 - 852316 - | hypothetical protein TERM 310 852440 - 852453 + g 70 -2.3 -4.99043 | opp_overlap 852430 852440, overlap 852431 852441 ATATATCCTGGAACA GGCAG GTTA CTGCA TTTTATTTCTCCCCA DKAM_0890 853279 - 853022 - | Predicted transcription regulator containing HTH domain DKAM_0891 853583 - 853377 - | 30S ribosomal protein S27e TERM 311 853433 - 853451 + g 78 -11.8 -3.02043 | opp_overlap 853449 853450, overlap 853420 853435 TCCTGGCTTTCCCGC CAGTTGGT TGA ACCAACTG TGTTCCACAAACCTT DKAM_0892 853807 - 853580 - | 50S ribosomal protein L44e DKAM_0893 854206 - 853934 - | Molybdopterin converting factor, small subunit TERM 312 854106 - 854128 + g 72 -6.2 -4.2008 | opp_overlap 854102, overlap 854107 TCGCTAACAATCTCC AGGAGTCCTC TTA GAGTACTCCC TTTATTCAACTCTAT TERM 313 854107 - 854127 + g 70 -9.7 -3.11325 | opp_overlap 854102, overlap 854106 CGCTAACAATCTCCA GGAGTCCTC TTA GAGTACTCC CTTTATTCAACTCTA DKAM_0894 854558 - 854190 - | Predicted acetyltransferase DKAM_0895 854713 - 854579 - | hypothetical protein DKAM_0896 855571 - 855314 - | hypothetical protein DKAM_0897 855769 - 855575 - | hypothetical protein DKAM_0898 856932 - 855787 - | DNA primase, large subunit TERM 314 856546 - 856559 + g 76 -5.3 -4.79223 | ATTCTCGACGTACAC TAGGT GGAG ACCTA TTTTTGATGCTATGG TERM 315 856576 - 856596 + g 93 -14.1 -3.54638 | opp_overlap 856581 TTTTGATGCTATGGA GAGGATGAC GGA GTCATCCTC TTTGAAGAGACTTCT DKAM_0899 857339 - 857193 - | hypothetical protein DKAM_0900 858176 - 857649 - | hypothetical protein TERM 316 858164 - 858175 + g 73 -2.2 -5.26918 | overlap 858158 TGCCGTAAAGGGGTC TGGG CTCC CTCA TTTTTTCTCCACTAT DKAM_0901 859162 - 858173 - | Uncharacterized membrane-associated protein/domain DKAM_0902 859251 - 859877 + | hypothetical protein DKAM_0903 859928 - 860095 + | hypothetical protein DKAM_0904 860102 - 860626 + | putative Fe-S oxidoreductase TERM 317 861364 - 861351 - g 75 -6.7 -4.47397 | AGAAATATAGTAAAA CACCT ATAC AGGTG GCATTGAACTACCTG DKAM_0905 860702 - 861505 + | Putative oxidoreductase, aldo/keto reductase family DKAM_0906 861598 - 862134 + | putative transcriptional regulator, AsnC family DKAM_0907 862364 - 862119 - | hypothetical protein DKAM_0908 863143 - 862364 - | adenylate kinase DKAM_0909 864263 - 863121 - | myo-inositol-1-phosphate synthase DKAM_0910 864602 - 864282 - | transcriptional regulator, PadR-like family DKAM_0911 866089 - 864827 - | aspartyl-tRNA synthetase TERM 318 866340 - 866374 + r 72 -7.7 -3.76402 | overlap 866343 GGGTAGGCTACAGCT TTTCCCAGCCGGCGG AAATA CCGCCGGCTGACTGA TTTAATAACTAGACT TERM 319 866343 - 866371 + r 83 -11.6 -2.97667 | overlap 866340 TAGGCTACAGCTTTT CCCAGCCGGCGG AAATA CCGCCGGCTGAC TGATTTAATAACTAG DKAM_0912 867378 - 866524 - | hypothetical protein TERM 320 867394 - 867363 - G 79 -8.8 -4.14392 | gap 1, opp_overlap 867365, overlap 867366 TCCTAAGCCTTAAAA CCA-GGTAAGTATGC ATA GCTTACTCACCATGG GTTCGAACCTGTTTA DKAM_0913 869358 - 867859 - | protein kinase DKAM_0914 869465 - 870319 + | Inositol-1-monophosphatase DKAM_0915 871430 - 870324 - | peptidase M24 DKAM_0916 871555 - 871731 + | hypothetical protein DKAM_0917 872110 - 871703 - | hypothetical protein DKAM_0918 872486 - 873631 + | Aspartate/serine transaminase DKAM_0919 874582 - 873884 - | Putative M protein (Streptomyces avermitilis) - like protein TERM 321 874431 - 874441 + g 71 -6.8 -4.11692 | overlap 874428 ACATTCTCCACGCCC TCCC TGA GGGA TTTTAGAGCTGCCTC DKAM_0920 874730 - 875263 + | hypothetical protein TERM 322 875824 - 875814 - f 71 -6.8 -4.08945 | opp_overlap 875813 875814 AGTACTTCTGTAAAA CCGA TAT TCGG CTTGTAGTATTCGTA DKAM_0921 876898 - 878094 + | L-fucose isomerase and related proteins - like protein DKAM_0922 878879 - 878091 - | Transcription initiation factor TFIIIB DKAM_0923 879208 - 878957 - | hypothetical protein DKAM_0924 879594 - 879773 + | hypothetical protein TERM 323 879860 - 879842 - T 70 -3.9 -4.84359 | opp_overlap 879842 879858 879859 GTACTTGGATAAAAA CAATGAA TATAG TCCATTG GTTCTCAACCAGTTA DKAM_0925 880160 - 879873 - | signal recognition particle protein Srp19 TERM 324 880229 - 880255 + r 79 -10.8 -3.20345 | opp_overlap 880225, overlap 880226 CTTCTTAAGGAGGAT CCCGTTCAAGAC TCC GTCTTGTCCGGG TCTTGATGTAACCTT DKAM_0926 880597 - 880211 - | 30S ribosomal protein S8e DKAM_0927 880759 - 881544 + | undecaprenyl diphosphate synthase DKAM_0928 882472 - 881552 - | hypothetical protein DKAM_0929 883170 - 882472 - | AcdB acetate--coA ligase (ADP-forming), beta chain DKAM_0930 884622 - 883177 - | AcdA-1 acetate--coA ligase (ADP-forming), alpha chain TERM 325 884928 - 884952 + G 70 -9.4 -3.32914 | GCTACAATGGGTGTT GTATTACCAG CATAT CTGGTGATAC TTACTGTAGTTACAT DKAM_0931 884670 - 885233 + | Chromate transporter DKAM_0932 885972 - 885280 - | hypothetical protein TERM 326 886967 - 886949 - g 74 -8.1 -3.89348 | overlap 886963 AAGCGGATAGAATAA TGGGCCG GGAAG CAGCCCA GGCTGGGAAAAGCTT DKAM_0933 886162 - 887595 + | peptidase U62, modulator of DNA gyrase DKAM_0934 887601 - 888926 + | peptidase U62, modulator of DNA gyrase DKAM_0935 889197 - 888976 - | hypothetical protein DKAM_0936 890588 - 889539 - | phosphate uptake regulator, PhoU DKAM_0937 891759 - 890995 - | ParB domain protein nuclease DKAM_0938 893330 - 891747 - | hypothetical protein DKAM_0939 893695 - 893447 - | DUF134 domain containing protein DKAM_0940 893898 - 894032 + | hypothetical protein DKAM_0941 894046 - 894180 + | hypothetical protein DKAM_0942 894473 - 894628 + | hypothetical protein DKAM_0943 894841 - 894668 - | hypothetical protein TERM 327 895095 - 895121 + H 72 -10 -2.80816 | opp_overlap 895068 GGGATTCGAACCCCG GGCCTCCGGCTT AGG AGGCCGGCGCCC TATCCTGGCTAGGCG DKAM_0944 895518 - 896531 + | Probable deoxyhypusine synthase DKAM_0945 897567 - 896590 - | respiratory-chain NADH dehydrogenase, subunit 1 DKAM_0946 897920 - 897573 - | hypothetical protein DKAM_0947 898422 - 897922 - | Putative integral membrane protein, DUF68 family DKAM_0948 898828 - 898415 - | Putative integral membrane protein, DUF67 family DKAM_0949 899616 - 898825 - | Na+/H+ antiporter MnhB subunit-related protein DKAM_0950 899845 - 899606 - | hypothetical protein DKAM_0951 900213 - 899842 - | Multisubunit Na+/H+ antiporter, MnhG subunit DKAM_0952 900493 - 900221 - | multiple resistance and pH regulation protein F DKAM_0953 900971 - 900495 - | NuoI NADH dehydrogenase I, subunit I DKAM_0954 902099 - 900978 - | NADH-ubiquinone oxidoreductase, chain 49 kDa DKAM_0955 903087 - 902074 - | NADH-quinone oxidoreductase, B subunit DKAM_0956 904642 - 903095 - | Hydrogenase 4, component F or formate hydrogen lyase, subunit 3 DKAM_0957 906089 - 904851 - | succinyl-diaminopimelate desuccinylase DKAM_0958 906422 - 907915 + | peptidase M32, carboxypeptidase Taq metallopeptidase DKAM_0959 908790 - 908452 - | hypothetical protein DKAM_0960 909091 - 908780 - | ISC1913-like resolvase DKAM_0961 911891 - 909378 - | nuclease (SNase domain protein) DKAM_0962 912264 - 911998 - | 30S ribosomal protein S25e DKAM_0963 912874 - 912341 - | Protein of unknown function DUF998 DKAM_0964 913638 - 912871 - | ABC-2 type transporter DKAM_0965 914435 - 913638 - | ABC-2 type transporter DKAM_0966 915382 - 914435 - | ABC transporter related DKAM_0967 915571 - 915849 + | multiple resistance and pH regulation protein F DKAM_0968 915846 - 916202 + | monovalent cation/proton antiporter, MnhG/PhaG subunit DKAM_0969 916199 - 916447 + | hypothetical protein DKAM_0970 916450 - 917187 + | Multisubunit Na+/H+ antiporter,putative MnhB subunit DKAM_0971 917217 - 917588 + | Multisubunit Na+/H+ antiporter, MnhC subunit DKAM_0972 917585 - 918070 + | Multisubunit Na+/H+ antiporter, MnhE subunit TERM 328 919505 - 919480 - g 72 -4.7 -4.63928 | opp_overlap 919473 AGACTATTGGAAAAA GGTTCCTGCTT TCAG AAGCATCAACC CTGGCCATCGCGTTA DKAM_0973 918087 - 919649 + | Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit DKAM_0974 921132 - 919828 - | phosphoadenosine phosphosulfate reductase TERM 329 921207 - 921188 - H 80 -10 -3.70863 | gap 1 TACACAGTATTTAAA GCTG-GGGG GAT CCCCACAGC AATCATAGATTTCGC DKAM_0975 921280 - 923112 + | aldehyde ferredoxin oxidoreductase DKAM_0976 923178 - 923546 + | Riboflavin kinase DKAM_0977 924445 - 923558 - | hypothetical protein DKAM_0978 924766 - 925584 + | protein of unknown function DUF62 TERM 330 925939 - 925916 - T 71 -3.2 -5.0133 | gap 1, opp_overlap 925916 925917 925919, overlap 925917 925919 CAGGCTTTTAAAAAA CTAGGAAAAAC TAG GATTTTCCT-G TTTTGGTTCTGAACA TERM 331 925917 - 925939 + T 73 -5.6 -4.48987 | opp_overlap 925916 925917 925919, overlap 925916 925919 AGGCTTTTAAAAAAC TAGGAAAAAC TAG GATTTTCCTG TTTTGGTTCTGAACA DKAM_0979 929363 - 925926 - | Pullulanase, glycoside hydrolase, family 57 TERM 332 926308 - 926288 - G 76 -8.9 -3.68836 | ATATGTATGGAATAA CGCCGGCCA ATA TGGCCACCG AGTAGTTTGATGGCA DKAM_0980 929665 - 930906 + | major facilitator superfamily MFS_1 DKAM_0981 931612 - 930968 - | CRISPR-associated protein Cas4 DKAM_0982 932285 - 931704 - | putative adenylyl cyclase CyaB DKAM_0983 933333 - 932299 - | histone deacetylase superfamily DKAM_0984 934369 - 933350 - | phosphoesterase, RecJ domain protein DKAM_0985 934977 - 934429 - | CDP-alcohol phosphatidyltransferase DKAM_0986 935869 - 935003 - | Endonuclease IV DKAM_0987 935921 - 936472 + | ADP-ribose pyrophosphatase DKAM_0988 936508 - 936819 + | hypothetical protein DKAM_0989 936843 - 937457 + | V-type ATPase, subunit D DKAM_0990 937454 - 937876 + | DUF61 domain containing protein DKAM_0991 937888 - 938181 + | hypothetical protein TERM 333 939615 - 939597 - g 70 -8.9 -3.37796 | opp_overlap 939612 939614 GTTCATTAGGGAGAA GAGGAGA GGAGA TCTCCTC AACGAGGTTGGATTA DKAM_0992 938182 - 940155 + | V-type ATPase, 116 kDa subunit I DKAM_0993 940238 - 940711 + | V-type ATPase, subunit K DKAM_0994 940721 - 941296 + | V-type ATPase subunit E DKAM_0995 941306 - 942256 + | hypothetical protein DKAM_0996 942258 - 942575 + | hypothetical protein DKAM_0997 942635 - 944389 + | V-type ATPase subunit A DKAM_0998 944392 - 945795 + | V-type ATPase subunit B DKAM_0999 945886 - 946578 + | putative ATP binding protein DKAM_1000 946818 - 946570 - | hypothetical protein DKAM_1001 948382 - 946943 - | prolyl-tRNA synthetase DKAM_1002 949886 - 948372 - | aminopeptidase Iap family-like protein DKAM_1003 949940 - 950437 + | hypothetical protein DKAM_1004 951399 - 950434 - | phage integrase family protein DKAM_1005 951653 - 952618 + | phosphoesterase, DHHA1 DKAM_1006 953398 - 952607 - | hypothetical protein DKAM_1007 953496 - 953744 + | hypothetical protein DKAM_1008 953748 - 954221 + | hypothetical protein DKAM_1009 954881 - 954240 - | hypothetical protein DKAM_1010 954983 - 956152 + | bifunctional phosphoglucose/phosphomannose isomerase DKAM_1011 957130 - 956249 - | phosphoesterase, PA-phosphatase related DKAM_1012 958014 - 957235 - | UbiA prenyltransferase TERM 334 957625 - 957597 - G 78 -11.8 -2.99649 | gap 1, overlap 957613 ATATTGTGAGAGAGA GCCCGGCAACTAC AACT GTA-TCGCCGGGC GGTGCATCAGCCGCG TERM 335 958236 - 958209 - R 71 -8.4 -3.45737 | gap 1, opp_overlap 958231, overlap 958211 958212 CAAGCAGTAGTATAA CAC-GCCTCGCCC CCT GGGCGAAGCCACG GCGTTCGGGCTCTTG TERM 336 958233 - 958211 - R 81 -11.2 -3.29541 | opp_overlap 958231, overlap 958209 958212 AGCAGTAGTATAACA CGCCTCGCCC CCT GGGCGAAGCC ACGGCGTTCGGGCTC TERM 337 958232 - 958212 - R 100 -14.7 -2.57243 | opp_overlap 958231, overlap 958211 958209 GCAGTAGTATAACAC GCCTCGCCC CCT GGGCGAAGC CACGGCGTTCGGGCT TERM 338 958695 - 958711 + r 78 -7.3 -4.57353 | GCCCGCGACGACTCT GTTATCC CCG GGGTAAC TTTTCTGTCATGCCC TERM 339 958926 - 958970 + r 89 -11.4 -3.54146 | gap 2, overlap 958924 CCCACCTGGCGTTGT CCTCCCG--GCAACCCGGGAGT AAG GCACCCGGGTTGCGATGGGTGG TGTTTCATTGACGCC TERM 340 959524 - 959550 + r 79 -8.6 -4.07687 | overlap 959523 GTCGGTTCTCGGTAC GGTCGCAGGGGA TCG TTCCCTGCCCCC TTTTCAAGGGCCCCT TERM 341 960527 - 960556 + r 100 -12.7 -3.48063 | GCCCTTTGGGACCCC GCCCCTCGCCGCC TTGA GGCGGCTGCGGGC TTGTCGGTTTCCCTA TERM 342 960674 - 960687 + r 81 -9.5 -3.90112 | ACCCGCCTTGTACTC CCGGG TCGC CCCGG TTTCCTTCAGCGGGC TERM 343 960897 - 960867 - R 93 -11 -4.13767 | opp_overlap 960856 960853, overlap 960871 CTTCCCACGGCAAAA CCAAGCCGTGGTAC TCT GCTCCACGGCACGG GCCCCCACTGTTTAG TERM 344 960893 - 960871 - R 84 -11.2 -3.68366 | opp_overlap 960856 960853, overlap 960867 CCACGGCAAAACCAA GCCGTGGTAC TCT GCTCCACGGC ACGGGCCCCCACTGT TERM 345 961020 - 961042 + r 78 -9.1 -3.84266 | CAGTAACCCCACATC TCCCCACGG TTATC CCGTAGGGA TTTGGTCTGGGCTCT TERM 346 961432 - 961450 + r 100 -16 -3.1355 | GGGTTCACGCCTTCA CACGGGGG TAT CCCCCGTG TTGCATCTGGGTGAG TERM 347 962421 - 962465 + r 100 -13.8 -3.28924 | gap 2, opp_overlap 962422, overlap 962422 962432 CCCTAGCTCGACAGT ATCTCCTCC--AATCCTCGGGT TGA GCCCGAGGATTTAGGAGGAGAC TTGTCGAGCCGGCTA TERM 348 962422 - 962464 + r 100 -17.3 -2.57211 | gap 2, opp_overlap 962422, overlap 962421 962432 CCTAGCTCGACAGTA TCTCCTCC--AATCCTCGGGT TGA GCCCGAGGATTTAGGAGGAGA CTTGTCGAGCCGGCT TERM 349 962464 - 962422 - R 100 -16.6 -2.62983 | gap 2, opp_overlap 962422 962421 962432 CCTAGCTCGACAGTA TCTCCTCC-AA-TCCTCGGG TTGAG CCCGAGGATTTAGGAGGAGA CTTGTCGAGCCGGCT TERM 350 962432 - 962452 + r 100 -13.3 -3.53343 | opp_overlap 962422, overlap 962422 962421 CAGTATCTCCTCCAA TCCTCGGGT TGA GCCCGAGGA TTTAGGAGGAGACTT TERM 351 962610 - 962595 - R 100 -11.8 -4.10657 | opp_overlap 962599 CTACAGCGGGGAAAA GCCCCC GTAA GGGGGC ACTCGGGGTGGCCCC TERM 352 962599 - 962632 + r 70 -8.1 -3.57561 | gap 1, opp_overlap 962595 AGCGGGGAAAAGCCC CCGT-AAGGGGGCACT CGG GGTGGCCCCGTCACGG TTTCCCGCATTGCGG TERM 353 962833 - 962857 + r 72 -9.9 -2.88579 | GCCACACCTTTTCGA GGAGGGACCCT TCC AGGCCCCCTCC TCTATGGGGGATTAG TERM 354 963086 - 963137 + r 100 -12.5 -3.4724 | gap 2, opp_overlap 963096, overlap 963099 963129 GCATCCACCTTCTCG TCGG-ATTCAAGC-TTCCGGAGGGT AAGC GCCCTCCGGATTGCTTGAATCCCCA TTGGGTTTTCTTGTA TERM 355 963099 - 963122 + r 100 -14.6 -3.37344 | opp_overlap 963096, overlap 963086 CGTCGGATTCAAGCT TCCGGAGGGT AAGC GCCCTCCGGA TTGCTTGAATCCCCA DKAM_1013 964028 - 963369 - | HAD-superfamily hydrolase, subfamily IA DKAM_1014 964764 - 964009 - | Phosphoglycolate phosphatase DKAM_1015 964901 - 965992 + | putative glutamate synthase subunit beta TERM 356 966059 - 966080 + G 79 -10.1 -3.77196 | opp_overlap 966055, overlap 966060 CATGCATAGGATGCG GCGCATGCG AGGC CGCATGCGA TTTCATACATGATGG TERM 357 966060 - 966079 + G 84 -13.6 -2.85996 | opp_overlap 966055, overlap 966059 ATGCATAGGATGCGG CGCATGCG AGGC CGCATGCG ATTTCATACATGATG DKAM_1016 965989 - 966489 + | 4Fe-4S ferredoxin, iron-sulfur binding domain protein DKAM_1017 966500 - 968026 + | NADH/ubiquinone/plastoquinone (complex I) DKAM_1018 968029 - 969537 + | NADH/ubiquinone/plastoquinone (complex I) DKAM_1019 969534 - 969815 + | hypothetical protein DKAM_1020 969822 - 970697 + | hydrogenase-4 component C DKAM_1021 970697 - 972334 + | NADH dehydrogenase (ubiquinone), 30 kDa subunit DKAM_1022 972331 - 972846 + | Hydrogenase 4 Fe-S subunit DKAM_1023 972839 - 973309 + | NADH ubiquinone oxidoreductase, 20 kDa subunit DKAM_1024 973818 - 973582 - | hypothetical protein TERM 358 973861 - 973875 + H 76 -9.2 -3.56092 | opp_overlap 973840 GGGCCGGGATTTGAA CCCGGG ACC TCCGGG TTTCCACCCTCCTCA TERM 359 974683 - 974667 - g 71 -7.9 -3.86822 | opp_overlap 974670 974682, overlap 974670 TAAGTCCTCTAGAAA CGAGCCC TAC GGGCTTG AGTACACTCATCCAT DKAM_1025 974353 - 975192 + | glutamine amidotransferase-like protein DKAM_1026 975222 - 976355 + | ATP-NAD/AcoX kinase DKAM_1027 976399 - 977334 + | Serine/threonine protein phosphatase DKAM_1028 977380 - 977712 + | hypothetical protein DKAM_1029 977726 - 978565 + | hypothetical protein DKAM_1030 978929 - 978579 - | hypothetical protein DKAM_1031 979141 - 978887 - | hypothetical protein DKAM_1032 979117 - 979491 + | transposase, IS605 OrfB family DKAM_1033 979760 - 981409 + | Thermosome subunit alpha DKAM_1034 981677 - 981997 + | DNA-directed RNA polymerase subunit K TERM 360 982908 - 982880 - gf 72 -9.6 -3.17075 | GCTTCTCCAAGGCAA CGAGGCCTACAT GTTCT ACCTAGGCCTCG GGATCGTAATGATAT DKAM_1035 981954 - 983051 + | Membrane-associated metallopeptidase, M50 family DKAM_1036 983080 - 985119 + | DNA topoisomerase I family A DKAM_1037 985351 - 985220 - | hypothetical protein DKAM_1038 985976 - 985449 - | inorganic pyrophosphatase DKAM_1039 986462 - 986058 - | hypothetical protein DKAM_1040 987616 - 986741 - | succinyl-CoA synthetase, alpha subunit DKAM_1041 988758 - 987619 - | succinyl-CoA synthetase, beta subunit DKAM_1042 989057 - 989707 + | IS element ISDka1 orfA, putative resolvase TERM 361 990849 - 990807 - g 100 -20.7 -3.53343 | gap 2 AACTTGCTCCTCAAA GCCCTGCGGGGCGGTGGGAGC AGT GCTCCAA--GCCCCGCAGGGC TACCCGTAGATGGGA DKAM_1043 989700 - 990989 + | IS element ISDka1 orfB, putative transposase DKAM_1044 991447 - 991998 + | flavin reductase domain protein, FMN-binding TERM 362 992201 - 992188 - g 79 -8.1 -4.33151 | GATTATAAGGGAAAA CGGGT ACAA ACCCG AGCTCGTTGTAGCTG DKAM_1045 992096 - 992788 + | Predicted phosphoribosyltransferase TERM 363 993017 - 992990 - gf 74 -9.9 -3.22886 | overlap 992988 992991 AGGGGACATAAGATA CCGCCCCATAG AATAAA CTATAGGGCGA ACATATGGGCCCTGA TERM 364 993016 - 992991 - gf 76 -11.2 -2.53249 | overlap 992990 992988 GGGGACATAAGATAC CGCCCCATAG AATAAA CTATAGGGCG AACATATGGGCCCTG TERM 365 993249 - 993233 - gf 74 -7.9 -3.97413 | overlap 993231 CTCAGGAAGAAAATA CTCGAGG CAG CCGCGAG ACACCCAGATATAAG DKAM_1046 992792 - 993613 + | 5'-methylthioadenosine phosphorylase II DKAM_1047 993583 - 994488 + | hypothetical protein TERM 366 994978 - 994988 + G 88 -8.2 -4.75472 | CCCATACGTGGCAGC CGGC CTA GCCG TTTTCTTCATCTCAC DKAM_1048 994865 - 995203 + | hypothetical protein TERM 367 995253 - 995237 - g 84 -5.1 -5.31275 | opp_overlap 995239 GTGGATTATAAAAAA GAGCC TAGGAAG GGCTC ACTTGAACTAATGGA TERM 368 995490 - 995439 - g 74 -10.2 -3.25093 | gap 1, opp_overlap 995439 995479, overlap 995437 AGACTCTAATGAAGA GGATCGGTGTTCTCGAGGCACTTGC TTC ACAAATACC-CGTGATCAACGATCC TTCTAAATCCCTTAT DKAM_1049 995207 - 996097 + | alpha-L-glutamate ligase, RimK family DKAM_1050 997270 - 996113 - | hypothetical protein DKAM_1051 997679 - 998809 + | Pyruvate formate-lyase activating enzyme - like protein TERM 369 998972 - 998958 - g 70 -2.1 -5.05601 | GATTACACAGAAAAA TGCGT GGAAA ACACA TGTCTACTCCTAAAA TERM 370 999013 - 998991 - g 89 -11.4 -4.18506 | CTACTCCTAAAAGAA TTATCACCAG AAC CCGGTGATAA TCGATACGTGGATCT DKAM_1052 998820 - 999191 + | hypothetical protein TERM 371 1000473 - 1000446 - g 72 -2.8 -4.91712 | gap 1, overlap 1000450 1000467 TTTAATGCATAAAAA GAAACTGGTTGAC TGG ATCAA-CAGTGTC TCGACTGATTGGCCG TERM 372 1000469 - 1000450 - g 70 -2.2 -4.97405 | gap 1, overlap 1000446 1000467 ATGCATAAAAAGAAA CTGGTTGAC TGG ATCAA-CAG TGTCTCGACTGATTG DKAM_1053 999247 - 1001700 + | valyl-tRNA synthetase DKAM_1054 1002402 - 1001704 - | Predicted metal-dependent phosphoesterases (PHP family) TERM 373 1002790 - 1002772 - H 75 -8.8 -3.60151 | opp_overlap 1002772 TTCTTTAAATCATAA CCCTGTAC AAA GTCCAGGG TTGTACCACATATAG TERM 374 1002772 - 1002790 + H 71 -8.8 -3.30771 | opp_overlap 1002772 TTCTTTAAATCATAA CCCTGTAC AAA GTCCAGGG TTGTACCACATATAG TERM 375 1003286 - 1003268 - g 71 -10.3 -2.73875 | overlap 1003279 GTGGGTTCAAGAGGA GCGTTGG ATAAG CCAACGC GATGGCAGGCTAAGA DKAM_1055 1002923 - 1003630 + | metallophosphoesterase DKAM_1056 1004505 - 1003639 - | hypothetical protein DKAM_1057 1005191 - 1004565 - | metal dependent phosphohydrolase DKAM_1058 1006064 - 1005213 - | N-glycosylase/DNA lyase DKAM_1059 1006483 - 1006767 + | hypothetical protein DKAM_1060 1006798 - 1007052 + | hypothetical protein DKAM_1061 1007285 - 1007064 - | hypothetical protein DKAM_1062 1007624 - 1007298 - | hypothetical protein DKAM_1063 1007710 - 1008870 + | RNA (Cytosine-C(5)-)-methyltransferase DKAM_1064 1009363 - 1008845 - | Nucleotide binding protein, PINc DKAM_1065 1010180 - 1009353 - | Probable inorganic polyphosphate/ATP-NAD kinase TERM 376 1009442 - 1009456 + g 76 -8.6 -4.17701 | GATAGCTTGTACTAC CTGTGA TTC TCACAG TTTCTCCTTTATCAA TERM 377 1009526 - 1009512 - G 71 -10 -3.22182 | opp_overlap 1009511, overlap 1009510 ATAGAGTATAACATA GCCTCT TGA AGAGGC CTCTATGATACTGGC DKAM_1066 1010301 - 1011302 + | Predicted methyltransferase DKAM_1067 1011771 - 1012454 + | protein-L-isoaspartate O-methyltransferase DKAM_1068 1013706 - 1012615 - | Flap structure-specific endonuclease TERM 378 1013155 - 1013176 + g 75 -10.1 -3.64487 | ATCGTAATCCTGTGA GGCGGATGC ATAG GCATCCCCC TTCTTAACAATATAG DKAM_1069 1013993 - 1013733 - | hypothetical protein DKAM_1070 1016214 - 1014025 - | AAA family ATPase, CDC48 subfamily TERM 379 1014395 - 1014415 + g 76 -11.9 -2.54276 | opp_overlap 1014376 1014395, overlap 1014394 1014392 CCAGGCCTCAGTAAA GCTGGATCT AGG AGATCCGGC CTATTGGTTGCAGCT TERM 380 1014415 - 1014395 - G 79 -9.7 -3.73224 | opp_overlap 1014395 1014394 1014392, overlap 1014376 CCAGGCCTCAGTAAA GCTGGATCT AGG AGATCCGGC CTATTGGTTGCAGCT TERM 381 1014758 - 1014744 - G 78 -5.6 -4.77165 | opp_overlap 1014745, overlap 1014745 GTCCGTATAATAAAA CGCCTC TTG GAGGCT TTATCCCGTATCTCT TERM 382 1014757 - 1014745 - G 70 -9.1 -3.45817 | opp_overlap 1014745, overlap 1014744 TCCGTATAATAAAAC GCCTC TTG GAGGC TTTATCCCGTATCTC TERM 383 1014745 - 1014757 + g 77 -9.1 -3.91858 | opp_overlap 1014745 1014744 TCCGTATAATAAAAC GCCTC TTG GAGGC TTTATCCCGTATCTC DKAM_1071 1016684 - 1016421 - | HTH_DTXR domain containing protein DKAM_1072 1018049 - 1016892 - | ABC transporter, ATP binding protein DKAM_1073 1018114 - 1018251 + | hypothetical protein DKAM_1074 1018667 - 1019098 + | putative transcription elongation factor, nusA DKAM_1075 1020213 - 1019101 - | tRNA pseudouridine synthase D DKAM_1076 1020589 - 1020242 - | peptidyl-tRNA hydrolase DKAM_1077 1020730 - 1020939 + | predicted Zn-ribbon RNA-binding protein DKAM_1078 1020951 - 1021223 + | elongation factor 1-beta DKAM_1079 1021363 - 1022019 + | TrkA-N domain protein DKAM_1080 1022206 - 1022093 - | hypothetical protein DKAM_1081 1022184 - 1022993 + | hypothetical protein DKAM_1082 1024338 - 1023040 - | RNA modification enzyme, MiaB family TERM 384 1023123 - 1023139 + g 71 -10.1 -3.18728 | opp_overlap 1023123 1023120 ATCTACCATAATCTA GAGCGGG GTC TCCGCTC TTACCTGTTACCACT DKAM_1083 1024452 - 1024877 + | putative translation initiation factor aIF-2, beta subunit DKAM_1084 1024887 - 1025213 + | Protein of unknown function DUF424 DKAM_1085 1025229 - 1026299 + | NMD protein affecting ribosome stability and mRNA decay-like protein DKAM_1086 1026296 - 1026646 + | Translation initiation factor 1A TERM 385 1026688 - 1026678 - gf 74 -4.6 -4.75372 | ATTACTCAGGAAAAA GGAG GAG CCCC GTAGAAAAGATAAAG TERM 386 1026703 - 1026729 + GF 72 -8.1 -3.72576 | opp_overlap 1026703 CGTAGAAAAGATAAA GACCTCTTTGA AACGG TTGAAGAGGTC TTTGATACAGCCACA TERM 387 1027139 - 1027107 - gf 79 -10.8 -3.211 | gap 1, overlap 1027105 GAACGGAAATAGATA TCCA-CTCCTTATAG AAGC CTACAAGGAGCTGGA AGTTGAAGAGCTCAA DKAM_1087 1026643 - 1027446 + | putative kinase TERM 388 1027450 - 1027437 - gT 70 -2.4 -4.94972 | CAGGACAATGAAAAA GGAA GATTAA TTCC TGGAGTAACTAGGCT TERM 389 1027672 - 1027684 + GT 83 -9.1 -4.1964 | TAGCATACGGGTTCA GCCCT GAG AGGGC TTTTAAACTGTTCGA DKAM_1088 1027419 - 1028054 + | Predicted RNA-binding protein (contains KH domains) DKAM_1089 1028549 - 1028130 - | hypothetical protein DKAM_1090 1030165 - 1028711 - | cation transporter TERM 390 1030140 - 1030129 - G 72 -5.8 -4.37527 | CCACAATCAGTAAAA GGCT TAGA AGCC CGGTGGCTATAGACA TERM 391 1030587 - 1030613 + r 72 -10 -2.80816 | opp_overlap 1030562 1030560 1030603 GGGATTCGAACCCCG GGCCTCCGGCTT AGA AGGCCGGCGCCC TATCCTGGCTAGGCG DKAM_1091 1032103 - 1030769 - | TRAP dicarboxylate transporter, DctM subunit TERM 392 1031924 - 1031936 + g 72 -9.1 -3.5771 | TAAAGGTATCATCAT CGCTG TGA CAGCG TTTGCCAGGCTTTTT DKAM_1092 1032607 - 1032116 - | TRAP dicarboxylate transporter, DctQ subunit DKAM_1093 1033759 - 1032656 - | TRAP dicarboxylate transporter, DctP subunit DKAM_1094 1034767 - 1033970 - | short-chain dehydrogenase/reductase SDR DKAM_1095 1035704 - 1034781 - | UDP-glucose 4-epimerase (galE-2) DKAM_1096 1035858 - 1036559 + | Predicted DNA binding protein DKAM_1097 1037563 - 1036556 - | Lactate dehydrogenase-like protein DKAM_1098 1038455 - 1037556 - | Putative dihidrodipicolinate synthase DKAM_1099 1040044 - 1038554 - | Sugar (Pentulose and hexulose) kinase DKAM_1100 1042874 - 1040148 - | alanyl-tRNA synthetase TERM 393 1041774 - 1041804 + g 74 -8.3 -3.85698 | gap 1 GACCACATCTGTGAG CCT-GCTGGGTTCG ACGC CGAGCCTGGCGAGG TTTCTGAGGAGACGC DKAM_1101 1043307 - 1042984 - | 50S ribosomal protein L12P DKAM_1102 1044750 - 1043749 - | Acidic ribosomal protein P0 - like protein DKAM_1103 1045403 - 1044756 - | 50S ribosomal protein L1P DKAM_1104 1045915 - 1045403 - | 50S ribosomal protein L11P DKAM_1105 1046409 - 1045918 - | Putative transcription antitermination protein nusG DKAM_1106 1046594 - 1046415 - | preprotein translocase SecE subunit DKAM_1107 1047502 - 1046612 - | Probable signal recognition particle protein DKAM_1108 1047978 - 1047508 - | prefoldin, alpha subunit DKAM_1109 1048235 - 1047975 - | 50S ribosomal protein LX DKAM_1110 1048909 - 1048235 - | translation initiation factor IF-6 DKAM_1111 1049282 - 1049004 - | 50S ribosomal protein L31e DKAM_1112 1049454 - 1049296 - | 50S ribosomal protein L39e DKAM_1113 1049818 - 1049465 - | DNA-binding TFAR19-related protein DKAM_1114 1050322 - 1049849 - | 30S ribosomal protein S19e DKAM_1115 1050667 - 1050374 - | putative RNA-binding protein containing KH domain DKAM_1116 1050996 - 1050619 - | RNAse P, Rpr2/Rpp21 subunit DKAM_1117 1051006 - 1051710 + | Probable ribosome biogenesis protein NEP1-like protein DKAM_1118 1051809 - 1054355 + | anaerobic ribonucleoside triphosphate reductase DKAM_1119 1054398 - 1055150 + | anaerobic ribonucleoside-triphosphate reductase activating protein DKAM_1120 1055150 - 1056049 + | thymidylate synthase, flavin-dependent DKAM_1121 1057456 - 1056860 - | HTH_DTXR multi-domain protein TERM 394 1057408 - 1057426 + g 79 -8.9 -4.13014 | CTATGCGCTTGATAG CTGTCAC ACCCC GTGACAG TTTTGCGAGTATGCA DKAM_1122 1057521 - 1057751 + | hypothetical protein DKAM_1123 1057744 - 1057971 + | hypothetical protein DKAM_1124 1057955 - 1058173 + | hypothetical protein TERM 395 1058710 - 1058700 - g 74 -8.2 -3.91144 | CGCACACCGTATAAA GGCC CGC GGCC CCATGCCTCTCCGAG TERM 396 1059253 - 1059204 - g 73 -11.5 -2.75064 | gap 1, opp_overlap 1059206 1059207, overlap 1059201 TTGCTGAGGCAATTA GCCCCAGCGACGTACAGCTACC TGTACTC GCTGGCT-TATGTCGCTGGGGC TTCGCAGGACTTCAT TERM 397 1059206 - 1059238 + G 82 -11.4 -3.51924 | gap 1, opp_overlap 1059204 1059201, overlap 1059207 GCTGAGGCAATTAGC CCCAGCGACGTACAG CTAC CTGTAC-TCGCTGGC TTATGTCGCTGGGGC TERM 398 1059207 - 1059237 + G 86 -14.9 -2.7094 | gap 1, opp_overlap 1059204 1059201, overlap 1059206 CTGAGGCAATTAGCC CCAGCGACGTACAG CTAC CTGTAC-TCGCTGG CTTATGTCGCTGGGG DKAM_1125 1058406 - 1060202 + | primase DKAM_1126 1060405 - 1061415 + | phospholipase A2/esterase DKAM_1127 1061605 - 1061420 - | hypothetical protein DKAM_1128 1061810 - 1061580 - | hypothetical protein DKAM_1129 1062184 - 1062456 + | hypothetical protein DKAM_1130 1063906 - 1062560 - | integrase protein TERM 399 1064149 - 1064131 - H 82 -6 -5.05606 | TTGAACAAAAATAAA CAGGCT TAACCCC AGCCTG AAGATATGAGAAGTA DKAM_1131 1064684 - 1065055 + | hypothetical protein DKAM_1132 1065024 - 1065749 + | sugar fermentation stimulation protein A DKAM_1133 1066765 - 1065752 - | Alcohol dehydrogenase, zinc-containing DKAM_1134 1068289 - 1066958 - | PMT multi-domain protein TERM 400 1067812 - 1067793 - G 70 -5 -4.49316 | overlap 1067795 AGCAGGAAGAATAAA GCCATGTT ATCA AACATGCC ATATATCGCTGAGAT DKAM_1135 1069679 - 1068426 - | predicted glycosyltransferase TERM 401 1069535 - 1069516 - G 72 -4.9 -4.65078 | overlap 1069517 ACACCTGTAATAAAA CCCCCCA GCCTAA TGGGGGC GAGACCGGCAAGTAG DKAM_1136 1070282 - 1069737 - | deoxycytidine triphosphate deaminase DKAM_1137 1071136 - 1070285 - | Putative sugar-phosphate nucleotidyl transferase TERM 402 1070721 - 1070701 - G 71 -9.7 -3.28924 | overlap 1070704 TATCTCCGTTGATAA CTAGGAACG TGC CGTTCCTGG ATAAGACATGCTCAG DKAM_1138 1071279 - 1071857 + | peptidase, zinc-dependent DKAM_1139 1072313 - 1071846 - | DUF101 domain containing protein DKAM_1140 1072426 - 1073772 + | ribulose bisophosphate carboxylase DKAM_1141 1074075 - 1073875 - | ABC transporter ATP-binding protein DKAM_1142 1074478 - 1074654 + | pyrrolidone-carboxylate peptidase DKAM_1143 1074687 - 1075577 + | hypothetical protein DKAM_1144 1076804 - 1075569 - | Subtilisin-like serine protease TERM 403 1075781 - 1075799 + g 79 -2.5 -5.46657 | gap 1, overlap 1075784 GGGTAGCCATTGATG TACCGCTT AGAT AAGCG-TA TTTTTTATTCAGGTA TERM 404 1075784 - 1075797 + g 72 -6.7 -4.36592 | overlap 1075781 TAGCCATTGATGTAC CGCTT AGAT AAGCG TATTTTTTATTCAGG DKAM_1145 1077104 - 1076946 - | hypothetical protein TERM 405 1077220 - 1077199 - R 100 -12.9 -3.28497 | overlap 1077194 CCACCTTAAAGGGAA CCCTCGCCC TTTG GGGCGGGGG GTCAGAGCTTAAAAC TERM 406 1077372 - 1077327 - R 70 -5.9 -4.25064 | gap 1, opp_overlap 1077331 1077336 AAATCTAATAAATAA GGGATGACGCCGGGGGCGGGAT TTG AACCCGCGCG-GGCGCGAGCCC ACTGGCTCTCAAGGC DKAM_1146 1078025 - 1077423 - | Ribosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)- methyltransferase) TERM 407 1077972 - 1077987 + g 77 -10.4 -3.44527 | AAAGAGCTTCCTCTC GCCTGG CTGG CCAGGC TTATAGTAGTGCGTC DKAM_1147 1079059 - 1078001 - | tRNA pseudouridine synthase DKAM_1148 1079419 - 1079129 - | 50S ribosomal protein L14e DKAM_1149 1080005 - 1079448 - | cytidylate kinase DKAM_1150 1080294 - 1080034 - | 50S ribosomal protein L34e DKAM_1151 1080826 - 1080371 - | hypothetical protein TERM 408 1080632 - 1080611 - G 77 -10.9 -3.22774 | overlap 1080616 TATATGTATTACGAA GAGAAGGAG CATT CTCCTCCTC GCAGACCTATATAGA DKAM_1152 1082268 - 1080829 - | preprotein translocase subunit SecY DKAM_1153 1083129 - 1082662 - | 50S ribosomal protein L15P DKAM_1154 1083629 - 1083141 - | 50S ribosomal protein L30P TERM 409 1083196 - 1083212 + g 100 -10.9 -5.1675 | CGGTATCCAAGCTCA CCCTTCA TAT TGAAGGG TTTTTTACTGGATCC DKAM_1155 1084294 - 1083641 - | 30S ribosomal protein S5P DKAM_1156 1084881 - 1084291 - | 50S ribosomal protein L18P DKAM_1157 1085355 - 1084897 - | 50S ribosomal protein L19e DKAM_1158 1085728 - 1085357 - | 50S ribosomal protein L32e DKAM_1159 1086321 - 1085767 - | 50S ribosomal protein L6P DKAM_1160 1086734 - 1086333 - | 30S ribosomal protein S8P DKAM_1161 1086911 - 1086747 - | 30S ribosomal protein S14P DKAM_1162 1087490 - 1086921 - | 50S ribosomal protein L5P DKAM_1163 1088242 - 1087484 - | 30S ribosomal protein S4e TERM 410 1087935 - 1087910 - G 79 -11.2 -3.36785 | opp_overlap 1087911 1087928 1087930, overlap 1087911 CGATATCTCAATCAA CCCCAGTACC TTGGTT GGTACTGGGA TGACCCTGTAGTATT TERM 411 1087934 - 1087911 - G 78 -12.5 -2.6175 | opp_overlap 1087911 1087928 1087930, overlap 1087910 GATATCTCAATCAAC CCCAGTACC TTGGTT GGTACTGGG ATGACCCTGTAGTAT DKAM_1164 1088646 - 1088245 - | 50S ribosomal protein L24P DKAM_1165 1089088 - 1088660 - | 50S ribosomal protein L14P DKAM_1166 1089438 - 1089088 - | 30S ribosomal protein S17P DKAM_1167 1089723 - 1089445 - | Ribonuclease P protein component 1, Rpp29 TERM 412 1089475 - 1089498 + g 79 -9.6 -3.72576 | opp_overlap 1089470 TTTCAATCTATCCCA GGGTCTACCA ATAA TCGTAGACCC TTTAATAACCACGGC DKAM_1168 1089968 - 1089723 - | 50S ribosomal protein L29P DKAM_1169 1090626 - 1089955 - | 30S ribosomal protein S3P DKAM_1170 1091102 - 1090629 - | 50S ribosomal protein L22P DKAM_1171 1091559 - 1091116 - | 30S ribosomal protein S19P DKAM_1172 1093506 - 1091596 - | VWA_CoxE domain containing protein DKAM_1173 1094407 - 1093490 - | ATPase associated with various cellular activities, AAA_5 DKAM_1174 1095221 - 1094502 - | 50S ribosomal protein L2P DKAM_1175 1095496 - 1095233 - | 50S ribosomal protein L23P DKAM_1176 1096326 - 1095499 - | 50S ribosomal protein L4P DKAM_1177 1097517 - 1096327 - | 50S ribosomal protein L3P DKAM_1178 1098428 - 1097598 - | DUF171 domain containing protein DKAM_1179 1100530 - 1098581 - | phosphoadenosine phosphosulfate reductase TERM 413 1098703 - 1098720 + g 75 -6.3 -4.4648 | gap 1, overlap 1098716 TTATAGGGCATGCCT CCAGGTAG AAC CT-CCTGG TTTTATCATCCAGGT TERM 414 1099434 - 1099405 - G 70 -10 -3.03124 | opp_overlap 1099406 GCCTATGCTTGAATA TGTAGAGCCAGC ATTCCA GCTGGCTCCACT CCTGTATAGGCGACG TERM 415 1099406 - 1099433 + g 73 -11.3 -2.69151 | opp_overlap 1099405 CCTATGCTTGAATAT GTAGAGCCAGC ATTCCA GCTGGCTCCAC TCCTGTATAGGCGAC TERM 416 1100272 - 1100288 + g 76 -9.4 -3.68073 | opp_overlap 1100269 1100272 CTATCTCATACATTA GGTCCC AGTGC GGGACC TTATTAAATAGCATA TERM 417 1100588 - 1100570 - R 77 -10.4 -3.08464 | opp_overlap 1100574, overlap 1100574 1100583 TTATCATCTATCCAA TCAACCTA ATT TAGGTTGA GTTGAACCAGGTTGA DKAM_1180 1103676 - 1100878 - | DEAD/DEAH box helicase domain protein TERM 418 1102075 - 1102096 + g 78 -5.8 -4.77173 | overlap 1102077 TTCCCAGTGTGGTAT GAGCGACT CAGCGT AGTCGCCC TTTGTTTTCTCAACA TERM 419 1102991 - 1103022 + g 78 -11.6 -3.05294 | opp_overlap 1102973 1102970 1103000, overlap 1103000 TCAACGGAGTCGTCA CCCAGTAGACTCAG CGAG CTGGGTTTACCGGG TATTACAACCTTTAC DKAM_1181 1103839 - 1104183 + | YL1 domain containing protein DKAM_1182 1104610 - 1104224 - | hypothetical protein DKAM_1183 1104683 - 1104955 + | hypothetical protein DKAM_1184 1105738 - 1104974 - | DNA polymerase sliding clamp B1 DKAM_1185 1105862 - 1106452 + | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit DKAM_1186 1106456 - 1106737 + | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit DKAM_1187 1106739 - 1107920 + | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit DKAM_1188 1107917 - 1108831 + | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit DKAM_1189 1109240 - 1109028 - | Sec61_beta domain containing protein DKAM_1190 1109282 - 1109539 + | MazG nucleotide pyrophosphohydrolase DKAM_1191 1110266 - 1109520 - | geranylgeranylglyceryl phosphate synthase-like protein DKAM_1192 1110615 - 1110256 - | protein of unknown function DUF701, zinc-binding putative DKAM_1193 1111046 - 1110645 - | hypothetical protein TERM 420 1112134 - 1112117 - g 88 -8.5 -4.87803 | opp_overlap 1112120 TACGGGGAAAGAAAA CAATACC TCCA GGTATTG GATAAAAACCTTAAC DKAM_1194 1111175 - 1112662 + | hypothetical protein DKAM_1195 1113069 - 1113350 + | Predicted EndoIII-related endonuclease DKAM_1196 1113483 - 1113370 - | hypothetical protein DKAM_1197 1114386 - 1113823 - | hypothetical protein DKAM_1198 1115609 - 1114866 - | ABC transporter related TERM 421 1115256 - 1115274 + g 70 -8.8 -3.36327 | opp_overlap 1115242, overlap 1115246 ACCTAGCCCTACGAG GGTCAGGG CTC TCCTGGCC TTCTCCCTAGCCTCA DKAM_1199 1117092 - 1115599 - | binding-protein-dependent transport systems inner membrane component TERM 422 1117195 - 1117145 - H 95 -14.3 -2.88544 | opp_overlap 1117126 1117124 1117120 1117147 1117152 1117153, overlap 1117147 1117152 CTCGAGCGTTATATA TATTAAATGCTTGGGATCCTATA GTATA TTTAGGATCCCGAGCGTTTAATA TATCCACCGAGGTGC TERM 423 1117147 - 1117193 + H 100 -16.9 -2.87211 | opp_overlap 1117147 1117145 1117152, overlap 1117126 1117124 1117120 1117152 1117153 CGAGCGTTATATATA TTAAATGCTTGGGATCCTATA GTATA TTTAGGATCCCGAGCGTTTAA TATATCCACCGAGGT TERM 424 1117193 - 1117147 - H 93 -12.5 -2.99471 | opp_overlap 1117126 1117124 1117120 1117147 1117152 1117153, overlap 1117145 1117152 CGAGCGTTATATATA TTAAATGCTTGGGATCCTATA GTATA TTTAGGATCCCGAGCGTTTAA TATATCCACCGAGGT TERM 425 1117152 - 1117188 + H 100 -12.4 -3.88498 | opp_overlap 1117147 1117145 1117152, overlap 1117126 1117124 1117120 1117147 1117153 GTTATATATATTAAA TGCTTGGGATCCTATA GTATA TTTAGGATCCCGAGCG TTTAATATATCCACC TERM 426 1117188 - 1117152 - H 74 -8 -3.91196 | opp_overlap 1117126 1117124 1117120 1117152 1117147 1117153, overlap 1117147 1117145 GTTATATATATTAAA TGCTTGGGATCCTATA GTATA TTTAGGATCCCGAGCG TTTAATATATCCACC TERM 427 1117153 - 1117187 + H 100 -13.7 -2.92777 | opp_overlap 1117152 1117147 1117145, overlap 1117126 1117124 1117120 1117152 1117147 TTATATATATTAAAT GCTTGGGATCCTATA GTATA TTTAGGATCCCGAGC GTTTAATATATCCAC DKAM_1200 1117326 - 1117712 + | hypothetical protein TERM 428 1119153 - 1119135 - g 72 -10.3 -2.83233 | overlap 1119137 CAAGGAGATCAAGGA GATGGGC GTCAA GCCCATC ATGATAACAGGCGAC TERM 429 1119189 - 1119171 - g 70 -8.8 -3.37474 | overlap 1119188 GATAACAGGCGACAA CGTCTACG TGG CGAAGACG ATCTCGGAGGTCGTC DKAM_1201 1117777 - 1120110 + | H+-transporting ATPase related protein DKAM_1202 1122954 - 1121512 - | ATP-dependent Lon-type protease DKAM_1203 1126686 - 1122961 - | predicted endonuclease-methyltransferase fusion protein TERM 430 1124136 - 1124155 + g 70 -9.2 -3.33696 | overlap 1124137 GCTCGACCTTCTTTT TCTGCCCG GGCT CGGGCGGG TTAGTTACCACCAGC TERM 431 1124137 - 1124154 + g 71 -10.5 -2.60075 | overlap 1124136 CTCGACCTTCTTTTT CTGCCCG GGCT CGGGCGG GTTAGTTACCACCAG DKAM_1204 1126937 - 1126683 - | hypothetical protein TERM 432 1126867 - 1126839 - G 74 -8.1 -3.86112 | overlap 1126840 AGAATAGAACCTAAA TCTCCAAGGCCCT TTG AGGGGCTTGAAGC TCTGCCTACCCGCTT TERM 433 1126866 - 1126840 - G 77 -11.6 -2.90583 | overlap 1126839 GAATAGAACCTAAAT CTCCAAGGCCCT TTG AGGGGCTTGAAG CTCTGCCTACCCGCT DKAM_1205 1127438 - 1127581 + | hypothetical protein DKAM_1206 1127607 - 1128092 + | pyrroline-5-carboxylate reductase TERM 434 1128557 - 1128541 - f 71 -10.1 -2.61888 | opp_overlap 1128541, overlap 1128540 AAACCTGTTAAACAT CGAGGAG GGG CTCCCCG TCTCCTACGGGTATC DKAM_1207 1128743 - 1129351 + | Protein of unknown function (DUF996) DKAM_1208 1130393 - 1129620 - | SufBD protein TERM 435 1130759 - 1130717 - R 100 -10.5 -4.43189 | gap 1, overlap 1130708 1130707 1130719 AGCAACCCGATAAAA CCGGA-CTGCCCGGAGCAGG GTCG CCTGACCCGGCCAGGCCCAG CAGACAGAAGGCGGG TERM 436 1130756 - 1130719 - R 91 -13.3 -2.54632 | overlap 1130708 1130707 1130717 CAACCCGATAAAACC GGACTGCCCGGAGCAGG GTCG CCTGACCCGGCCAGGCC CAGCAGACAGAAGGC DKAM_1209 1131105 - 1130845 - | 30S ribosomal protein S25e DKAM_1210 1132685 - 1131237 - | protein of unknown function UPF0027 DKAM_1211 1134083 - 1132761 - | histidyl-tRNA synthetase TERM 437 1134048 - 1134060 + g 73 -10.5 -3.09987 | TGTTAGATCCCTCAT CCCCC TCG GGGGG TTCAATACGTCTTCC DKAM_1212 1134623 - 1134087 - | tRNA intron endonuclease, catalytic-like protein DKAM_1213 1134712 - 1135785 + | translation initiation factor, aIF-2B alpha subunit-related DKAM_1214 1135838 - 1136617 + | peptidase A24A, prepilin type IV DKAM_1215 1137683 - 1136697 - | DNA repair and recombination protein radA DKAM_1216 1137818 - 1139662 + | threonyl-tRNA synthetase DKAM_1217 1139830 - 1139675 - | hypothetical protein TERM 438 1139981 - 1139962 - R 79 -7.8 -4.33754 | overlap 1139963 AATTACAACTGAAAA TCCTGCTC TCTA GAGCAGGG AGGAGGTCAATAGTT TERM 439 1139980 - 1139963 - R 84 -11.3 -3.19168 | overlap 1139962 ATTACAACTGAAAAT CCTGCTC TCTA GAGCAGG GAGGAGGTCAATAGT DKAM_1218 1141604 - 1140303 - | Type 2 DNA topoisomerase VI subunit A DKAM_1219 1143208 - 1141616 - | Type 2 DNA topoisomerase VI subunit B TERM 440 1141927 - 1141941 + g 73 -4.2 -4.91109 | opp_overlap 1141929, overlap 1141929 TGCTCTCCTTCCCAA CACCCT TGA AGGGTA TTTTTGTACTGCACA TERM 441 1141929 - 1141939 + g 71 -6.8 -4.08042 | opp_overlap 1141929, overlap 1141927 CTCTCCTTCCCAACA CCCT TGA AGGG TATTTTTGTACTGCA TERM 442 1143117 - 1143136 + g 72 -10.8 -2.89039 | opp_overlap 1143111 TGATAAATAGCTCTA GCTGGATT GGAG AATCCAGC TATCTCACGGTACTT DKAM_1220 1143397 - 1143900 + | Probable bis(5'-adenosyl)-triphosphatase, HIT family DKAM_1221 1143881 - 1144123 + | hypothetical protein DKAM_1222 1144611 - 1144366 - | hypothetical protein DKAM_1223 1145323 - 1144595 - | hypothetical membrane protein DKAM_1224 1145561 - 1146061 + | hypothetical protein DKAM_1225 1146910 - 1146149 - | protein of unknown function DUF72 DKAM_1226 1147334 - 1146927 - | transcriptional regulator, AbrB family DKAM_1227 1148280 - 1147471 - | phosphoribosyltransferase DKAM_1228 1148437 - 1148841 + | hypothetical protein TERM 443 1150197 - 1150179 - g 77 -11 -3.2056 | ACGCATACTTATTAA CTGGTGAG GTA CCCACCAG CGAGAGGAAGCACAT DKAM_1229 1148834 - 1150495 + | Putative DNA repair helicase DKAM_1230 1151207 - 1150554 - | hypothetical protein TERM 444 1151266 - 1151253 - R 73 -5.3 -4.58663 | opp_overlap 1151251 1151253 ATGAGTTGGGAAAAA CTGTA AAAA TACAG TGTTTACTCCTTTAC DKAM_1231 1151533 - 1151270 - | DNA/RNA-binding protein Alba 1 DKAM_1232 1151820 - 1151665 - | hypothetical protein TERM 445 1152548 - 1152526 - g 76 -8.5 -4.15222 | gap 1 ACTCGTCGCAACAAA CGG-CTTCCT ATCG AGGAAGTCCG AGCTGCTTTCAAGGA TERM 446 1152687 - 1152707 + G 71 -10.5 -2.71011 | opp_overlap 1152687 1152684, overlap 1152673 TGGCTAAGAAGAGGA TTAGCCTTC TCT GGAGGCTAA TGGTTAACAAGGCCT TERM 447 1155348 - 1155329 - g 76 -7.8 -4.258 | overlap 1155330 1155332 TCATTGATGAAGAAA CTAGGCCT TGGA AGGCCAAG CACCTACTCGAAGAT DKAM_1233 1152005 - 1155643 + | Reverse gyrase DKAM_1234 1155902 - 1155627 - | DNA/RNA-binding protein Alba 2 TERM 448 1156158 - 1156142 - R 100 -13.7 -3.01924 | opp_overlap 1156137 GATGCCGGTGGAACA GGGGGTC CAA GACCCCC ACCCCTTCACTTCCA DKAM_1235 1157379 - 1156855 - | DUF367 containing protein DKAM_1236 1157539 - 1157802 + | putative transcriptional regulator, AsnC family DKAM_1237 1159403 - 1158318 - | tyrosyl-tRNA synthetase TERM 449 1158587 - 1158607 + g 79 -10.5 -3.58905 | ATTTATTTAACTCTA TCACAGGGT TCA ACTCTGTGA TTCTCTGTGGACAGT TERM 450 1159685 - 1159701 + r 71 -10.1 -2.62522 | overlap 1159684 ATTCTGACCTCCTCT CCGCCCT GAG AGGGTGG CTTACTGTTCCCTGC DKAM_1238 1160631 - 1159945 - | beta-lactamase domain protein DKAM_1239 1160712 - 1161608 + | methionine aminopeptidase DKAM_1240 1161666 - 1162760 + | DUF1512 domain containing protein DKAM_1241 1162766 - 1163050 + | hypothetical protein DKAM_1242 1163284 - 1163592 + | DUF1805 domain containing protein DKAM_1243 1163600 - 1165024 + | pyruvate kinase DKAM_1244 1166148 - 1165171 - | IS element ISDka1 orfB, putative transposase DKAM_1245 1166770 - 1166126 - | IS element ISDka1 orfA, putative resolvase TERM 451 1166502 - 1166527 + g 71 -9.8 -3.12668 | overlap 1166497 CTGTAGCCTTTTGCC GTGCAGTACT GTGTAA GGTACTGCAC TTGCCTCTCGAGGTC TERM 452 1167220 - 1167231 + r 75 -5.8 -4.59212 | overlap 1167203 CGAGGCCCTTGAGCA TGGC TTCA GCCA TTTCTTTCATTACTT DKAM_1246 1167895 - 1167200 - | triosephosphate isomerase DKAM_1247 1169076 - 1167925 - | Fructose-1,6-bisphosphatase DKAM_1248 1170974 - 1169166 - | putative ATPase RIL DKAM_1249 1171445 - 1171143 - | DNA-directed RNA polymerase, M/15 kDa subunit DKAM_1250 1171612 - 1171830 + | 30S ribosomal protein S17e DKAM_1251 1171827 - 1172339 + | hypothetical protein DKAM_1252 1172339 - 1172488 + | hypothetical protein DKAM_1253 1173524 - 1172823 - | putative dolichol kinase [Lipid metabolism], SEC59 DKAM_1254 1174142 - 1173594 - | hypothetical protein TERM 453 1173787 - 1173759 - G 100 -19.1 -2.80113 | opp_overlap 1173751 1173759 1173762, overlap 1173762 CACTACCTTATCATA TAATTCACTGGGC ACA GCCCAGTGAATTA TCCTTCCATTCCTCA TERM 454 1173759 - 1173787 + g 100 -19.1 -2.79684 | opp_overlap 1173759 1173762, overlap 1173751 1173762 CACTACCTTATCATA TAATTCACTGGGC ACA GCCCAGTGAATTA TCCTTCCATTCCTCA TERM 455 1173784 - 1173762 - G 100 -16.4 -3.54951 | opp_overlap 1173759 1173762, overlap 1173759 TACCTTATCATATAA TTCACTGGGC ACA GCCCAGTGAA TTATCCTTCCATTCC TERM 456 1173762 - 1173784 + g 100 -16.4 -3.54109 | opp_overlap 1173762 1173759, overlap 1173759 TACCTTATCATATAA TTCACTGGGC ACA GCCCAGTGAA TTATCCTTCCATTCC DKAM_1255 1174292 - 1175563 + | adenosylhomocysteinase DKAM_1256 1175571 - 1176062 + | Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit DKAM_1257 1176152 - 1176802 + | Archaeal enzymes of ATP-grasp superfamily DKAM_1258 1178321 - 1176759 - | tRNA-guanine transglycosylase, various specificities DKAM_1259 1178775 - 1178326 - | Small nuclear ribonucleoprotein (snRNP) - like protein DKAM_1260 1178949 - 1179206 + | hypothetical protein DKAM_1261 1180877 - 1179228 - | Thermosome subunit beta TERM 457 1180059 - 1180073 + g 76 -8.6 -4.14541 | AACCAGTATATCTTC TTCCTG TTG CAGGAA TTTCTCTAATTGCTC DKAM_1262 1182186 - 1181170 - | Thioredoxin reductase TERM 458 1181223 - 1181249 + g 87 -10.1 -4.21772 | TACATGCGGCGTCAG CAGCGATCGCT CCATC AGCGGCCGCTG TTATTATTTGTTCAA DKAM_1263 1182256 - 1183206 + | aldo/keto reductase DKAM_1264 1183702 - 1183250 - | RecB-family nuclease-like protein TERM 459 1183346 - 1183358 + g 76 -7.7 -4.2573 | opp_overlap 1183346 GACTTCTCTAAGCCA CACTG AGT CAGTG TTTTCCACTTCTTTC DKAM_1265 1184677 - 1183703 - | Cytosine-specific DNA methylase TERM 460 1184143 - 1184163 + g 74 -3.3 -4.99035 | overlap 1184146 TCCTCGGTGTTATGG GAATATTCG ATA TGAATACTC TTTTTCTGTGGCTAG DKAM_1266 1185159 - 1184680 - | Transcription factor TFIIE, alpha subunit DKAM_1267 1185378 - 1185659 + | hypothetical protein DKAM_1268 1186987 - 1185731 - | proteasome-activating nucleotidase DKAM_1269 1187065 - 1187565 + | Predicted transcription factor DKAM_1270 1187582 - 1188637 + | small GTP-binding protein TERM 461 1188700 - 1188716 + G 76 -8.7 -4.07568 | GTCACTACGCATGTA GCTCTTG TAT CAAGGGC TTTTGGGGCCAACGG DKAM_1271 1188634 - 1189173 + | SpoU-like RNA methylase DKAM_1272 1190123 - 1189191 - | hypothetical protein DKAM_1273 1192979 - 1190262 - | hypothetical protein TERM 462 1191241 - 1191218 - G 72 -8.9 -3.61715 | opp_overlap 1191236 TACCGCTTCCAACAA TCACAGGCG TGTAGT CACCTGTGA GCGAGGCCAACAGTA DKAM_1274 1197193 - 1193342 - | Subtilisin-like serine protease TERM 463 1193677 - 1193725 + g 77 -12 -2.90941 | gap 2 CAGGGTATGGGAACC TTACCATCAGTGTTGCAGTGCCTG ATG CCGGCA-TG-GACACTGATGGTAG TCTCTGCGGTATAGT DKAM_1275 1197389 - 1197514 + | hypothetical protein DKAM_1276 1197580 - 1198167 + | hypothetical protein TERM 464 1198301 - 1198311 + G 72 -8.2 -3.72893 | TCAATGGGCTACTAT GCCC CCA GGGC TTTAATGGAGAGGTG DKAM_1277 1198154 - 1198660 + | hypothetical protein DKAM_1278 1199017 - 1199625 + | Proteasome subunit DKAM_1279 1199883 - 1199752 - | hypothetical protein TERM 465 1199791 - 1199816 + g 82 -7.6 -4.63486 | opp_overlap 1199793 TTCGCGTATTCTAGA CATCAGCAAG CGTTTC CCTGCTGATG TTTTGTTAGCGGGGT DKAM_1280 1200026 - 1199910 - | hypothetical protein DKAM_1281 1200830 - 1200423 - | Putative nucleic acid-binding protein, contains PIN domain TERM 466 1200607 - 1200589 - G 76 -5.3 -4.74103 | opp_overlap 1200589 TCTTTAAGTGAAAAA CCGAGAA CTTCT TTCTCAG ATTCCTTTATGGTGC DKAM_1282 1201078 - 1200833 - | hypothetical protein DKAM_1283 1201562 - 1201446 - | hypothetical protein DKAM_1284 1201656 - 1202672 + | small GTP-binding protein DKAM_1285 1203717 - 1202644 - | Probable RNA 3'-terminal phosphate cyclase TERM 467 1203422 - 1203394 - G 80 -9.7 -3.90744 | overlap 1203397 TCCTTCGGCAAACAA TAATACTGGAAGC ATG GCTTGCAGTACTA GTGAAATGCTTCCAG TERM 468 1203419 - 1203397 - G 79 -9.2 -4.08557 | overlap 1203394 TTCGGCAAACAATAA TACTGGAAGC ATG GCTTGCAGTA CTAGTGAAATGCTTC DKAM_1286 1204225 - 1203698 - | nicotinamide-nucleotide adenylyltransferase DKAM_1287 1206210 - 1204267 - | mRNA 3'-end polyadenylation factor DKAM_1288 1207075 - 1206455 - | Proteasome subunit DKAM_1289 1207499 - 1208560 + | Glycerol-1-phosphate dehydrogenase (NAD(P)) DKAM_1290 1209283 - 1208573 - | peptidylprolyl isomerase, FKBP-type DKAM_1291 1209842 - 1209363 - | PUA domain containing protein DKAM_1292 1211152 - 1209926 - | DNA primase DKAM_1293 1211424 - 1211236 - | 50S ribosomal protein L37e DKAM_1294 1211672 - 1211445 - | Small nuclear ribonucleoprotein (snRNP) - like protein DKAM_1295 1214194 - 1211801 - | DNA polymerase TERM 469 1211835 - 1211854 + g 75 -2.8 -5.20154 | gap 1, overlap 1211836 1211837 TCGAACAGGCTTTTC CT-GCCAGC TGT GCTGGCTAC TTTTTTCAATTGTGT TERM 470 1211837 - 1211851 + g 79 -11.4 -3.41448 | overlap 1211836 1211835 GAACAGGCTTTTCCT GCCAGC TGT GCTGGC TACTTTTTTCAATTG TERM 471 1213909 - 1213926 + g 73 -9.9 -3.33483 | TTCTAACATACTCTG GGATCAC GGTT GTGATCC TTAATGCTTTAACTG DKAM_1296 1214294 - 1215364 + | putative translation factor Pelota - like protein DKAM_1297 1216054 - 1215338 - | DNA polymerase, beta domain protein region TERM 472 1217085 - 1217097 + G 70 -10.5 -2.54634 | overlap 1217084 TCCTCGAGTACTTAG GCGGG TTA CCCGC GTTCCTACTCTACAA DKAM_1298 1216217 - 1217281 + | peptidase M50 DKAM_1299 1217415 - 1217549 + | hypothetical protein DKAM_1300 1217540 - 1217677 + | hypothetical protein DKAM_1301 1218742 - 1217678 - | Threonine synthase DKAM_1302 1218920 - 1219207 + | 30S ribosomal protein S26e TERM 473 1219602 - 1219648 + T 93 -12.3 -3.18264 | gap 2, overlap 1219605 GTTGGAGAGGTTGTT GAAGCCTGCGGGGCGGTGGGAGC AGT GCTCCAA--GCCCCGCAGGGCTC TTCGTAGATGGGAGC TERM 474 1219605 - 1219646 + T 93 -12.4 -3.1552 | gap 3, overlap 1219602 GGAGAGGTTGTTGAA G-CCTGCGGGGCGGTGGGAGC AGT GCTCCAA--GCCCCGCAGGGC TCTTCGTAGATGGGA DKAM_1303 1220437 - 1219952 - | hypothetical protein DKAM_1304 1220722 - 1220462 - | hypothetical protein DKAM_1305 1221069 - 1221398 + | hypothetical protein DKAM_1306 1221427 - 1221906 + | putative RNA methylase DKAM_1307 1221961 - 1222083 + | hypothetical protein DKAM_1308 1222935 - 1222138 - | methyltransferase type 11 TERM 475 1222398 - 1222369 - G 74 -10.7 -3.14132 | opp_overlap 1222368 1222393 GCTTGTCTTTATTAA CCCTGCAACGGTG TTTA CAGCGTTCCAGGG ATCTGGTATATCCAG DKAM_1309 1223009 - 1223506 + | hypothetical protein DKAM_1310 1223695 - 1223537 - | putative transcriptional regulator, CopG/Arc/MetJ family DKAM_1311 1223682 - 1223801 + | hypothetical protein DKAM_1312 1225185 - 1223782 - | glycosyl transferase, family 39 TERM 476 1225418 - 1225428 + r 77 -8.2 -3.92542 | opp_overlap 1225416 CGCGGGTTCAAATCC CGCC CCC GGCG TTGTTTCCACATGGC DKAM_1313 1226696 - 1225467 - | hypothetical protein DKAM_1314 1229301 - 1226731 - | DNA polymerase TERM 477 1227400 - 1227412 + g 71 -7.7 -3.95153 | GATAGAGTCTGTGTC GCCAT ATA ATGGC TTTATCCCTAGTTCG TERM 478 1227656 - 1227708 + g 72 -5.5 -4.41241 | opp_overlap 1227659 1227702, overlap 1227657 1227702 CTAAAATCCCTCAGT ATACCCGTGATCTGTGCTGTTAAAC CAG GTTTCTCAACGCAGACCACGTGTAG TTTTCTACCCGTTTC TERM 479 1229294 - 1229316 + g 77 -10.6 -3.31931 | overlap 1229297 1229311 TTAACATGTAGTGGT GTATCCATGC TTC GCATGGATCC TTCATCCTTCTCTGA TERM 480 1229297 - 1229313 + g 74 -10.9 -2.82529 | overlap 1229294 1229311 ACATGTAGTGGTGTA TCCATGC TTC GCATGGA TCCTTCATCCTTCTC DKAM_1315 1229677 - 1229318 - | Nascent polypeptide-associated complex protein TERM 481 1229745 - 1229763 + H 77 -8.2 -3.94188 | TAAAAATATGTTTCC CTCAATGG GTT TCATTGAG TTGTTTACCATGACT DKAM_1316 1229790 - 1231067 + | Putative exonuclease TERM 482 1231093 - 1231106 + T 76 -9.5 -3.53091 | overlap 1231073 GGCGGGGACTCGAAC CCCGG ACCA CCGGG TTTCCGCACCAGGCT DKAM_1317 1233479 - 1231269 - | translation elongation factor EF-2 DKAM_1318 1233907 - 1233647 - | hypothetical protein DKAM_1319 1234316 - 1233951 - | prefoldin, beta subunit DKAM_1320 1234533 - 1234309 - | hypothetical protein DKAM_1321 1235086 - 1234553 - | Probable brix domain-containing ribosomal biogenesis protein DKAM_1322 1235352 - 1235092 - | 50S ribosomal protein L37Ae DKAM_1323 1236232 - 1235372 - | Probable exosome complex exonuclease 2 DKAM_1324 1236962 - 1236234 - | Probable exosome complex exonuclease 1 TERM 483 1236890 - 1236908 + g 72 -5.9 -4.4195 | CTAACGCTATTCTAA CCGGACG TAGTT CCTCCGG TTTTCTCCCATCTAT DKAM_1325 1237678 - 1236959 - | exosome complex RNA-binding protein Rrp4 DKAM_1326 1238381 - 1237686 - | Shwachman-Bodian-Diamond syndrome protein - like protein DKAM_1327 1239163 - 1238423 - | proteasome subunit alpha DKAM_1328 1240304 - 1239837 - | Ribonuclease P protein component 2 DKAM_1329 1240923 - 1240297 - | Ribonuclease P subunit p30 TERM 484 1240617 - 1240633 + g 72 -6.6 -4.37013 | overlap 1240630 CCCTGAACTGCTTTA CATCGA AGAAC TCGATG TTTTCATCATTCATT DKAM_1330 1241483 - 1240995 - | Protein of unknown function DUF54 DKAM_1331 1242109 - 1241447 - | 50S ribosomal protein L15e TERM 485 1241573 - 1241585 + gH 72 -7.7 -3.86015 | GTACACTGTGCCTCT GAGTC CAC GACTC TTTCTAAGGCCCCTC DKAM_1332 1242196 - 1243428 + | Predicted GTPase DKAM_1333 1243809 - 1243441 - | hypothetical protein DKAM_1334 1245092 - 1243809 - | Glucose-1-phosphate thymidylyltransferase TERM 486 1244351 - 1244373 + g 75 -6.2 -4.42491 | CCTCACCGATTATAT GGGAGGGTTC TAT GACTCTTCCC TTTATCTCTTTTTTA DKAM_1335 1245934 - 1245293 - | 30S ribosomal protein S3Ae DKAM_1336 1246331 - 1246014 - | hypothetical protein DKAM_1337 1247437 - 1246316 - | phosphoesterase, RecJ domain protein TERM 487 1247894 - 1247884 - R 73 -8.2 -3.58305 | opp_overlap 1247883, overlap 1247875 1247876 AATGAACCCCCTAAA GGGG ACC CCCC ACTCTTTAGGGCGGG DKAM_1338 1248417 - 1247917 - | 30S ribosomal protein S15P/S13e DKAM_1339 1249093 - 1248527 - | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family DKAM_1340 1249760 - 1249083 - | Mn2+-dependent serine/threonine protein kinase DKAM_1341 1250818 - 1249751 - | Putative O-sialoglycoprotein endopeptidase DKAM_1342 1251381 - 1251037 - | 30S ribosomal protein S24e DKAM_1343 1251868 - 1251395 - | Protein of unknown function (DUF359) DKAM_1344 1252076 - 1251861 - | DNA-directed RNA polymerase, subunit E'' DKAM_1345 1252632 - 1252060 - | DNA-directed RNA polymerase subunit E' DKAM_1346 1253142 - 1252720 - | Predicted nucleic acid-binding protein, containing PIN domain DKAM_1347 1254385 - 1253129 - | translation initiation factor IF-2 subunit gamma DKAM_1348 1255173 - 1254508 - | 30S ribosomal protein S6e DKAM_1349 1255503 - 1257332 + | Probable translation initiation factor IF-2, unclassified subunit DKAM_1350 1257568 - 1257350 - | 50S ribosomal protein L24e DKAM_1351 1257632 - 1257904 + | 30S ribosomal protein S28e DKAM_1352 1258166 - 1258300 + | hypothetical protein TERM 488 1258416 - 1258426 + T 73 -5.4 -4.58786 | TCAAGAACCTCGTCG TCCT GGG AGGA TTTATTATTGTTCAT DKAM_1353 1258856 - 1258473 - | 50S ribosomal protein L7Ae DKAM_1354 1260737 - 1259001 - | glutamyl-tRNA synthetase TERM 489 1259925 - 1259937 + g 73 -10.5 -3.02187 | overlap 1259921 TACAATGTATTTCTC CCCGG TGA CCGGG TGTGGTGTTTTAGAT DKAM_1355 1261221 - 1260739 - | hypothetical protein DKAM_1356 1262390 - 1261218 - | isopentenyl-diphosphate delta-isomerase DKAM_1357 1263241 - 1262390 - | Predicted dioxygenase TERM 490 1262976 - 1262959 - G 79 -9.9 -3.74792 | opp_overlap 1262959 1262954 1262961 CAGGATACACTGAAA CAGGTCT TCCA AGACCTG TGTGATTTGTACCAA TERM 491 1262959 - 1262976 + g 70 -9.9 -3.05997 | opp_overlap 1262959, overlap 1262954 1262961 CAGGATACACTGAAA CAGGTCT TCCA AGACCTG TGTGATTTGTACCAA TERM 492 1263358 - 1263339 - R 71 -5 -4.72986 | overlap 1263343 GATGCCTACGAAAAA TTTAGAGG GATG CCTCGAAA TCAGTAGGCTGCTCA DKAM_1358 1263987 - 1263340 - | 30S ribosomal protein S2P DKAM_1359 1264231 - 1264001 - | DNA-directed RNA polymerase subunit N DKAM_1360 1264632 - 1264210 - | 30S ribosomal protein S9P TERM 493 1264562 - 1264574 + g 77 -3.3 -5.10767 | GGTTTTATCACAGCC CTAGC AAT GCTTG TTTTTCTCTTGCCTG DKAM_1361 1265081 - 1264629 - | 50S ribosomal protein L13P DKAM_1362 1265449 - 1265087 - | 50S ribosomal protein L18e DKAM_1363 1266288 - 1265446 - | DNA-directed RNA polymerase subunit D TERM 494 1265796 - 1265811 + g 72 -4.7 -4.59027 | ATTTATGCGCAGCGG TGGAG ACTGGG CTCCA TTTTATATGCTCCTT DKAM_1364 1266716 - 1266315 - | 30S ribosomal protein S11P DKAM_1365 1267173 - 1266730 - | 30S ribosomal protein S4P DKAM_1366 1267772 - 1267248 - | 30S ribosomal protein S13P TERM 495 1267801 - 1267826 + r 73 -7.1 -4.19704 | gap 1, opp_overlap 1267800 AATTAACTGATAACG GT-TTTTAAAGC TTA GCTTTAAAACAC TTTTCCCTCGAGTTA DKAM_1367 1268539 - 1268201 - | 30S ribosomal protein S10P DKAM_1368 1269900 - 1268578 - | Translation elongation factor EF-1alpha DKAM_1369 1270639 - 1270043 - | 30S ribosomal protein S7P DKAM_1370 1271139 - 1270693 - | 30S ribosomal protein S12P DKAM_1371 1271608 - 1271162 - | NusA family KH domain protein DKAM_1372 1271929 - 1271615 - | 50S ribosomal protein L30e DKAM_1373 1273142 - 1271922 - | DNA-directed RNA polymerase, subunit A'' DKAM_1374 1275804 - 1273144 - | DNA-directed RNA polymerase subunit A' DKAM_1375 1279250 - 1275801 - | DNA-directed RNA polymerase, subunit B TERM 496 1279110 - 1279121 + g 85 -5.8 -5.28831 | ATCTATCCTGTATTT CTCG ATGA CGAG TTTTATTTTATTCGT DKAM_1376 1279561 - 1279310 - | DNA-directed RNA polymerase subunit H TERM 497 1279620 - 1279630 + H 73 -5.4 -4.60487 | opp_overlap 1279620 ACCTATTTCTAGAAA TCGT TAA ACGA TTTTTAAAGATAATG DKAM_1377 1279912 - 1281096 + | cell division control protein 6 - like protein, cdc6 TERM 498 1281154 - 1281194 + G 71 -7.7 -3.96892 | gap 1 AGGCCTATGACGACG GGT-TTTTCCCTCCCG AATTCAAGGG CGGGAGGGGAGACACC TTTATAGTAGGGGTT DKAM_1378 1281114 - 1281683 + | Protein of unknown function DUF99 DKAM_1379 1281770 - 1283680 + | phosphoenolpyruvate carboxykinase TERM 499 1283700 - 1283690 - T 71 -3.2 -5.02715 | AGATGAAAGGAAAAA GATG GTT CACC GGTTTAAGGCGGGTA TERM 500 1283790 - 1283760 - T 93 -11 -4.09864 | overlap 1283777 ACCTACGGGTTAAAA GCCCGCCGCTCTAC CAA GCTGAGCTACGGGC CCAACTATTTTCATG DKAM_1380 1285395 - 1284040 - | pyridoxal phosphate-dependent aminotransferase DKAM_1381 1285669 - 1285433 - | hypothetical protein TERM 501 1285625 - 1285643 + g 72 -6 -4.41206 | TACTATTAAACTAGC CATCGATC TCT GATAGATG TTTTCTCCACTCATT DKAM_1382 1285785 - 1287188 + | Sodium:alanine symporter DKAM_1383 1288957 - 1287239 - | Predicted Fe-S oxidoreductase DKAM_1384 1289048 - 1289629 + | Predicted nucleotide kinase DKAM_1385 1289622 - 1290464 + | GTP-binding protein, HSR1-related DKAM_1386 1290454 - 1290639 + | hypothetical protein DKAM_1387 1290642 - 1291409 + | MoeB/thiF molybdopterin or thiamine synthase protein DKAM_1388 1291707 - 1291387 - | Molybdopterin converting factor, small subunit DKAM_1389 1292295 - 1292077 - | hypothetical protein DKAM_1390 1292962 - 1292396 - | Uncharacterized protein containing a ferredoxin domain DKAM_1391 1293490 - 1293618 + | hypothetical protein DKAM_1392 1294832 - 1293912 - | ABC-type transport system, permease component DKAM_1393 1295862 - 1294834 - | Putative ABC-type transport system, permease component TERM 502 1295004 - 1295014 + g 72 -8.2 -3.81414 | opp_overlap 1295001 1295004 ACCCGGCTAACACCA CCCC AAT GGGG TTATTCCTTCCAAGT DKAM_1394 1297357 - 1295855 - | putative ABC sugar transport system, ATPase component TERM 503 1296118 - 1296137 + g 73 -4.3 -4.85545 | gap 1 TTGGCTTCTTCACTA GCTCCCTG CCAAC CAGG-AGC TTTTGTTGATTTCCT DKAM_1395 1298676 - 1297444 - | Membrane lipoprotein family protein TERM 504 1298783 - 1298764 - g 83 -10.6 -3.82484 | overlap 1298765 ACATTACAACTGAAA GCCCGCCC TTTA GGGCGGGA AGAAGGTTAGAGCAT TERM 505 1298782 - 1298765 - g 84 -14.1 -2.88768 | overlap 1298764 CATTACAACTGAAAG CCCGCCC TTTA GGGCGGG AAGAAGGTTAGAGCA TERM 506 1299809 - 1299786 - g 79 -12.5 -2.88427 | opp_overlap 1299783 1299779 1299793 1299799 1299803, overlap 1299788 1299799 1299803 AAGAGTTTTGAGAGA GACCAGGTG AAAATA CACCTGGTC ACCTAGGTTTATTTT DKAM_1396 1298724 - 1299815 + | alcohol dehydrogenase GroES domain protein TERM 507 1299799 - 1299820 + F 77 -3.7 -5.20783 | opp_overlap 1299788 1299786 1299799 1299803, overlap 1299783 1299779 1299793 1299803 GAGACCAGGTGAAAA TACACCTGG TCAC CTAGGTTTA TTTTTATGTTTGAAT TERM 508 1299803 - 1299816 + F 77 -4.5 -5.0707 | opp_overlap 1299788 1299786 1299799 1299803, overlap 1299783 1299779 1299799 1299793 CCAGGTGAAAATACA CCTGG TCAC CTAGG TTTATTTTTATGTTT DKAM_1397 1299830 - 1300300 + | sugar-phosphate isomerase, RpiB/LacA/LacB family DKAM_1398 1302185 - 1300347 - | D-fructose-6-phosphate amidotransferase DKAM_1399 1302244 - 1302930 + | uridylate kinase, putative DKAM_1400 1303030 - 1304142 + | archaeal ATPase DKAM_1401 1304947 - 1304159 - | short-chain dehydrogenase/reductase SDR DKAM_1402 1305338 - 1305225 - | 3-ketoacyl-(acyl-carrier-protein) reductase DKAM_1403 1306288 - 1305584 - | SpoU rRNA methylase DKAM_1404 1306841 - 1306260 - | Predicted rRNA or tRNA methylase DKAM_1405 1307707 - 1306871 - | Probable dimethyladenosine transferase DKAM_1406 1308341 - 1307691 - | DNA-binding protein DKAM_1407 1308753 - 1308379 - | RNA polymerase Rpb4 DKAM_1408 1309132 - 1308806 - | 50S ribosomal protein L21e DKAM_1409 1310547 - 1309204 - | predicted pseudouridylate synthase DKAM_1410 1311912 - 1310563 - | GTP-binding signal recognition particle SRP54, G- domain protein TERM 509 1311063 - 1311092 + g 76 -2.3 -5.27923 | gap 1 TTCTCGAGACGAATC TAGGTGGGTT-GAA TAC TTCTAATTCATCTA TTTTTTCTCCGGTTC DKAM_1411 1312215 - 1312751 + | 50S ribosomal protein L10e TERM 510 1312983 - 1312993 + G 71 -6.8 -4.06678 | CTTCACGCGCCAGAC GGCT TTA AGCC TTTATATAAATGCGT DKAM_1412 1312863 - 1313888 + | diphthamide biosynthesis protein DKAM_1413 1313892 - 1314530 + | Predicted DNA methylase DKAM_1414 1314537 - 1315082 + | Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) DKAM_1415 1315087 - 1315704 + | hypothetical protein DKAM_1416 1315723 - 1316004 + | DNA-directed RNA polymerase, subunit L DKAM_1417 1316149 - 1316391 + | hypothetical protein DKAM_1418 1316651 - 1316878 + | DNA-directed RNA polymerase subunit M TERM 511 1317492 - 1317461 - g 73 -9.5 -3.42395 | opp_overlap 1317458, overlap 1317459 1317462 TCGAGGAGTGAAATA GCTGAGGCTGAAA TAGAGC TCTCAGCCTCAGA TGGTGCGTTAATCGA TERM 512 1317491 - 1317462 - g 81 -13 -2.65116 | opp_overlap 1317458, overlap 1317461 1317459 CGAGGAGTGAAATAG CTGAGGCTGAAA TAGAGC TCTCAGCCTCAG ATGGTGCGTTAATCG DKAM_1419 1316942 - 1317691 + | DNA polymerase sliding clamp subunit B2 (PCNA - like protein) DKAM_1420 1317672 - 1318796 + | Probable DNA primase small subunit DKAM_1421 1318793 - 1319296 + | hypothetical protein DKAM_1422 1319779 - 1319324 - | hypothetical protein DKAM_1423 1320174 - 1319974 - | Nucleolar RNA-binding protein Nop10p DKAM_1424 1320965 - 1320171 - | translation initiation factor IF-2 subunit alpha DKAM_1425 1322987 - 1320981 - | putative oligosaccharyl transferase STT3 subunit (B5) (integral membrane protein 1) TERM 513 1321061 - 1321042 - G 79 -9.4 -4.0371 | overlap 1321058 TATTCGCTATATAAA CCAGTTAT ATTC ATAACTGG TACACCAATTACTGC TERM 514 1322500 - 1322528 + g 90 -13.3 -3.52906 | opp_overlap 1322498 1322497 AGCCCGGTTAAACCT GTGAGAAGCAC AGTAGGA GTGCTTCTCAC TTCTCTCGCCTTATA TERM 515 1322655 - 1322675 + g 72 -9 -3.54129 | gap 1 ATAGATTAATGTAGT GAGCCCAGC TATC GC-GGGCTC TTTAAAGAACCTGTA DKAM_1426 1323234 - 1323728 + | hypothetical protein DKAM_1427 1323734 - 1324978 + | cell division control protein 6 - like protein, cdc6 DKAM_1428 1324998 - 1325111 + | hypothetical protein DKAM_1429 1325111 - 1325230 + | hypothetical protein DKAM_1430 1325239 - 1325499 + | hypothetical protein DKAM_1431 1326338 - 1326198 - | hypothetical protein DKAM_1432 1326469 - 1326335 - | hypothetical protein DKAM_1433 1327647 - 1326889 - | ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component DKAM_1434 1328681 - 1327650 - | ABC-type Fe3+-siderophore transport system, permease component DKAM_1435 1329845 - 1328688 - | ABC-type Fe3+-hydroxamate transport system, periplasmic component TERM 516 1329736 - 1329747 + g 78 -5.8 -4.91109 | GTCTCCTCAACCTTC CCTG TATG CAGG TTTTTATCGTAGAAG TERM 517 1329817 - 1329830 + g 81 -5.3 -5.14965 | opp_overlap 1329806 ATAATCGCGACCAGG GTTGT CGTG ACAAC TTTTTTAGTAAGCAT DKAM_1436 1330524 - 1329835 - | formylmethanofuran dehydrogenase, subunit E - like protein TERM 518 1330653 - 1330633 - R 89 -7.5 -4.93968 | ATTTACAACTAAAAA TCCCGTCCT TTT AGAGCGGGA TGACGAGAGCCTATA TERM 519 1330812 - 1330790 - R 100 -11.2 -4.41302 | TAGGAAACCAATAAA CCTCCCAGCC TAG AGCGGGGAGG AGGTCAACTTGGATT DKAM_1437 1331773 - 1331315 - | signal peptidase DKAM_1438 1332084 - 1331779 - | hypothetical protein DKAM_1439 1332402 - 1332091 - | hypothetical protein DKAM_1440 1332416 - 1333723 + | enolase TERM 520 1333698 - 1333723 + T 77 -4.7 -5.0133 | opp_overlap 1333718, overlap 1333690 CGAGGTATCCTGGAT TCAGGGTGTTC CCGA GAAAACCATGA TTTTTTCACGGGATA DKAM_1441 1333974 - 1333729 - | hypothetical protein DKAM_1442 1335008 - 1334220 - | aspartate/glutamate/uridylate kinase TERM 521 1334299 - 1334276 - G 72 -8.8 -3.65201 | opp_overlap 1334275, overlap 1334267 GAATAGCGTTAACAA CGTCCTGCCT ACTG AAGCCGGACG CTATGATCACTCTAA DKAM_1443 1335109 - 1336437 + | GPI mannosyltransferase 1 (S. cerevisiae) - like protein DKAM_1444 1338037 - 1336517 - | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase TERM 522 1338228 - 1338217 - H 70 -7.2 -3.79747 | GCAGTTACTATTAAA CGCC TTTT GGCG GGGAATCAATGGCTC TERM 523 1339023 - 1339037 + H 74 -5 -4.8269 | overlap 1339024 TTAAATCTATCCTGA TCCTTT TCC AAAGGG TTTTTGATCATTATG DKAM_1445 1339317 - 1340090 + | Probable diphthine synthase DKAM_1446 1341130 - 1340378 - | Iron compound ABC transporter, ATP-binding protein DKAM_1447 1342058 - 1341120 - | Iron compound ABC transporter, permease protein TERM 524 1341751 - 1341741 - G 71 -6.8 -4.07133 | GATTGTGAGAAATAA GGCT AAA AGCC CGCCAAGCATCGAGG DKAM_1448 1343086 - 1342055 - | Iron compound ABC-type transporter, periplasmic component DKAM_1449 1343830 - 1343249 - | hypothetical protein DKAM_1450 1344394 - 1343840 - | isochorismatase hydrolase DKAM_1451 1344563 - 1345897 + | Glu/Leu/Phe/Val dehydrogenase, C terminal DKAM_1452 1346151 - 1345894 - | Protein of unknown function DUF504 TERM 525 1346067 - 1346083 + g 75 -6.7 -4.44608 | TCTCTGCCCGGTATC TTATGTA GAT TACATAA TTGTTTTTAAATCCG DKAM_1453 1346335 - 1346577 + | hypothetical protein DKAM_1454 1346817 - 1346626 - | hypothetical protein TERM 526 1346758 - 1346776 + g 74 -10.3 -3.24188 | overlap 1346761 ATCCCTGTCTCCGGT GAACCCG TGCTC CGGGTTC TTGATGATCCTGTAG DKAM_1455 1348213 - 1347152 - | Polyprenyl synthetase DKAM_1456 1348527 - 1349177 + | Hexulose-6-phosphate synthase DKAM_1457 1350322 - 1349207 - | tryptophanyl-tRNA synthetase DKAM_1458 1352251 - 1350437 - | Glutamine-fructose-6-phosphate transaminase DKAM_1459 1352322 - 1353005 + | GTP cyclohydrolase III DKAM_1460 1353380 - 1353156 - | hypothetical protein DKAM_1461 1353610 - 1354233 + | Conserved protein implicated in secretion DKAM_1462 1354772 - 1354230 - | hypothetical protein DKAM_1463 1355780 - 1354785 - | AIR synthase related protein domain protein DKAM_1464 1356969 - 1356124 - | TatD-related deoxyribonuclease DKAM_1465 1357115 - 1357645 + | ABC transporter, permease protein DKAM_1466 1357757 - 1358188 + | hypothetical protein DKAM_1467 1359017 - 1358175 - | NAD+ synthetase DKAM_1468 1359078 - 1359194 + | hypothetical protein DKAM_1469 1360694 - 1360014 - | AMMECR1 domain protein DKAM_1470 1361217 - 1360669 - | protein of unknown function DUF82 DKAM_1471 1362047 - 1361214 - | CBS domain containing protein DKAM_1472 1363064 - 1362051 - | putative signal transduction protein with CBS domain DKAM_1473 1363281 - 1363931 + | IS element ISDka1 orfA, putative resolvase TERM 527 1365072 - 1365032 - g 100 -18.4 -4.07687 | gap 2 ACTTGCTCCTCAAAA CCCTGCGGGGCGGTGGGAGC AGT GCTCCAA--GCCCCGCAGGG CTACCCGTAGATGGG DKAM_1474 1363915 - 1365213 + | IS element ISDka1 orfB, putative transposase