TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.483162 %AT, 4425294 nt, 38699 terms. Intergenic: 0.561771 %AT, H2T: 549531 nt, 5026 terms; T2T: 161215 nt, 3535 terms; H2H: 232954 nt, 3024 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|170650740|ref|NC_010485.1| Escherichia coli SMS-3-5 plasmid pSMS35_8, complete sequence (length 8909) EcSMS35_B0001 496 - 257 - | hypothetical protein mbeA 2214 - 661 - | mobilization protein MbeA mbeC 2551 - 2204 - | mobilization protein MbeC rop 2558 - 2782 + | regulatory protein Rop EcSMS35_B0005 3096 - 2848 - | hypothetical protein TERM 1 3185 - 3197 + G 100 -10.5 -4.66609 | opp_overlap 3182 3183, overlap 3182 ACCCCAGAAAAGGCC GCGCC GGA GGCGC TTTTTCCATAGGCTC EcSMS35_B0006 3153 - 3524 + | hypothetical protein TERM 2 3684 - 3712 + F 71 -9.8 -3.05384 | gap 1 GAAGCCAGTTACCTC GGTTAAG-CAGTT CCCC AACTGACTTAACC TTCGATCAAACCGCC TERM 3 3715 - 3746 + F 85 -11.6 -3.53012 | opp_overlap 3723, overlap 3723 AACTGACTTAACCTT CGATCAAACCGCCT CCCC AGGCGGTTTTTTCG TTTACAGGCAGCAGA TERM 4 3723 - 3738 + F 100 -10.4 -5.37593 | opp_overlap 3723, overlap 3715 TAACCTTCGATCAAA CCGCCT CCCC AGGCGG TTTTTTCGTTTACAG TERM 5 3738 - 3723 - f 80 -10.4 -3.737 | opp_overlap 3715 3723 TAACCTTCGATCAAA CCGCCT CCCC AGGCGG TTTTTTCGTTTACAG TERM 6 3795 - 3779 - f 100 -7.3 -5.61596 | opp_overlap 3779 3791, overlap 3791 ACGCGCAGAAAAAAA GGATCTC AAG AAGATCC TTTGATCTTTTCTAC TERM 7 3779 - 3795 + F 70 -6.6 -4.10958 | opp_overlap 3779 3791, overlap 3791 ACGCGCAGAAAAAAA GGATCT CAAGA AGATCC TTTGATCTTTTCTAC TERM 8 4217 - 4193 - g 74 -5.9 -4.56969 | AAGTTCATAAAGAAA GATTTTTTC AGAAAAA GAAAAAATC TAAATAATGCCCCCG TERM 9 4275 - 4309 + G 100 -15.9 -4.0641 | overlap 4277 ACAATCTACTTTGTT TGGTCCTAGCAATCC CATTT GGATTGCTAGGACTG TTTATATCAATAAAG TERM 10 4277 - 4307 + G 100 -18.5 -3.6269 | overlap 4275 AATCTACTTTGTTTG GTCCTAGCAATCC CATTT GGATTGCTAGGAC TGTTTATATCAATAA imm 3992 - 4333 + | colicin-E1 immunity protein cea 5895 - 4330 - | colicin-E1 protein TERM 11 5679 - 5702 + g 77 -5.9 -4.72029 | overlap 5681 5683 CTGCGGCAGCTTTTG CCCGGGCAG CCTGTT CTGCCTGCG TTTTCTTCAATTGAG TERM 12 5977 - 5939 - H 77 -9.8 -3.71279 | overlap 5943 AATAGTTAAAAGCAA TATACTGTATATATAACC ACT GGTTTTATATACAGCTTA AAATTACGCCGCTGC TERM 13 5973 - 5943 - H 86 -12.8 -3.27177 | overlap 5939 GTTAAAAGCAATATA CTGTATATATAACC ACT GGTTTTATATACAG CTTAAAATTACGCCG EcSMS35_B0009 6155 - 6592 + | hypothetical protein TERM 14 6920 - 6910 - g 70 -5.4 -4.37534 | AAAGCGACAGGAAAA TCAC GGA GTGA TGTGCAGCAACGCAT TERM 15 7046 - 7033 - g 74 -2.3 -5.03314 | overlap 7034 7035 CTTACCCCGAAAAAA TCCAG GCTG CTGGC TGAGACGATTTCTGC EcSMS35_B0010 6676 - 7095 + | putative lipoprotein SEQUENCE gi|170650751|ref|NC_010486.1| Escherichia coli SMS-3-5 plasmid pSMS35_4, complete sequence (length 4074) repB 165 - 866 + | initiator replication protein RepB TERM 1 890 - 903 + T 100 -5.9 -5.81412 | opp_overlap 890 TTAAGGCATCTAAAA CGCGC TCTG GTGCG TTTTTTTTGCGTAAG TERM 2 1000 - 981 - T 100 -6.4 -5.47218 | overlap 982 CGCGAGCTAAAAAAA TCCCCC ATATACGG GGGGGA AGAAACTATGCGGAG TERM 3 997 - 982 - T 72 -8.2 -3.87608 | overlap 981 GCGAGCTAAAAAAAT CCCCCA TATA CGGGGG GGAAGAAACTATGCG TERM 4 1134 - 1155 + T 70 -9.3 -3.17206 | overlap 1132 GTGACCAACCGCGAT CGCGCCTCC TCTC GGTGGCGTG TGTTCGTGCATCTTC EcSMS35_C0002 3273 - 1114 - | MobA/MobL family protein TERM 5 1665 - 1639 - G 79 -3.7 -5.10064 | gap 2, opp_overlap 1609 TCCAAGACAGAAAAA CTCCGGCCATGTC TTC GGC-TGGC-GGAG ATTGCGGGTATGTTG TERM 6 2198 - 2222 + g 70 -3.5 -4.68593 | TGCTGTCGCAATTTT TCCATTTGCTG GCT CAGAGACTGGA TTTTTCCCTGCTCAC TERM 7 2522 - 2548 + g 100 -13.6 -3.98083 | opp_overlap 2512 AGAAGGTCAGCCATA CGGCGGGCAGGC TCT GTCAGCCCGCTG TTTCTGAGTTCGGTA EcSMS35_C0004 3452 - 3706 + | putative mobilization protein C EcSMS35_C0003 4040 - 3675 - | hypothetical protein TERM 8 3976 - 3993 + g 70 -4.9 -4.50218 | GTCGTTAAGTTTTTA GATCTTG TTTT TAAGATC TTGTTTTTAATACTT SEQUENCE gi|170650756|ref|NC_010487.1| Escherichia coli SMS-3-5 plasmid pSMS35_3, complete sequence (length 3565) TERM 1 571 - 552 - g 100 -3.6 -5.60993 | overlap 554 TGCCGGAGAAAAAAA CTTCATTT CAAT AAATGATG AAATAGTGAATAAAA EcSMS35_D0001 49 - 711 + | hypothetical protein TERM 2 786 - 770 - T 100 -13.7 -4.45083 | overlap 781 GCCAGATGCAGAAAA GCCCGCT AAT AGCGGGC CTCCCGATAAACCTC TERM 3 1643 - 1673 + T 100 -13.2 -3.85698 | overlap 1644 TACCATAACATCCGT TGCCCGCACCGCCT GAG AGGCGCTGAGGGCG TTTCTGACGGGAAAC TERM 4 1644 - 1672 + T 89 -14.5 -2.91276 | overlap 1643 ACCATAACATCCGTT GCCCGCACCGCCT GAG AGGCGCTGAGGGC GTTTCTGACGGGAAA EcSMS35_D0003 2223 - 1627 - | hypothetical protein EcSMS35_D0004 2842 - 2633 - | hypothetical protein TERM 5 2776 - 2790 + g 100 -12.8 -4.66609 | opp_overlap 2765 2772 AGAGCGAAAAGGCCA CGCCCC GCC GGGGCG TTTTTCCATAGGCTC SEQUENCE gi|170650760|ref|NC_010488.1| Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence (length 130440) EcSMS35_A0001 540 - 154 - | replication initiation protein repA4 TERM 1 415 - 365 - G 100 -14.6 -3.43961 | opp_overlap 365 371, overlap 371 TTACAACATTCATAA TTAAAAGCGACTCTGTTCCGGCCC TTT GGGCCGGGGCGGGGCCGCTTTTCA GTTATGAGGGAGGGG TERM 2 365 - 415 + g 100 -21.2 -2.57132 | opp_overlap 365 371, overlap 371 TTACAACATTCATAA TTAAAAGCGACTCTGTTCCGGCCC TTT GGGCCGGGGCGGGGCCGCTTTTCA GTTATGAGGGAGGGG TERM 3 409 - 371 - G 100 -13.6 -4.50058 | opp_overlap 365 371, overlap 365 CATTCATAATTAAAA GCGACTCTGTTCCGGCCC TTT GGGCCGGGGCGGGGCCGC TTTTCAGTTATGAGG TERM 4 371 - 409 + g 100 -20.2 -4.3208 | opp_overlap 371 365, overlap 365 CATTCATAATTAAAA GCGACTCTGTTCCGGCCC TTT GGGCCGGGGCGGGGCCGC TTTTCAGTTATGAGG repA1 1773 - 904 - | IncFII replication initiation protein RepA1 TERM 5 1633 - 1651 + g 70 -5.9 -4.22948 | opp_overlap 1631 1632 1633 GGCGAAATCAAAACG GGAGGTG AAGCC CACCGCC TTTTCCATCAGTTTT TERM 6 1880 - 1928 + r 100 -12.7 -5.1417 | gap 1 TACGGTTTAAGTGGG CCCCGGTAATCTTCTTCGCAGT CGCCAA ACT-TGACGAAGATTATCGGGG TTTTTGCTTTTCTGG repA2 2314 - 2054 - | replication regulatory protein RepA2 TERM 7 2495 - 2517 + r 72 -8.5 -3.57561 | opp_overlap 2486 TGGAAACGCCGGGAG CGGGGAAAA CTTGC TTTTTCCCG TTTCCGGGGTTGGAC EcSMS35_A0005 3373 - 3164 - | hypothetical protein EcSMS35_A0006 3880 - 3419 - | staphylococcal nuclease homologue TERM 8 4026 - 4010 - R 73 -2.9 -5.1615 | overlap 4011 TTAATACGGAAAAAA CTCTGTG CTA CTCAGAA CTGTCCGGTCATACT TERM 9 4081 - 4114 + r 91 -7.5 -5.26875 | gap 1, overlap 4082 AATCTCATGCATTAT TCAGCCTTC-TGACTC CTG GAGTAATGAAGGCTGC TTTTTTCGTTACCCC TERM 10 4082 - 4113 + r 85 -11 -3.75402 | gap 1, overlap 4081 ATCTCATGCATTATT CAGCCTTC-TGACTC CTG GAGTAATGAAGGCTG CTTTTTTCGTTACCC EcSMS35_A0007 4335 - 4123 - | hypothetical protein TERM 11 4323 - 4334 + g 71 -3 -4.84359 | TCCGTGAACTGTTTC TGAA TCCA TTCA TTTTTCTGCCCCTCC TERM 12 4443 - 4467 + r 100 -7.2 -6.02919 | gap 1, overlap 4439 4438 AGCCTTATTGTTTCA GCCT-CCTGAA GTTC TTCGGGGAGGC TTTTTTTATTTCTCA finO 5084 - 4473 - | fertility inhibition protein FinO TERM 13 4662 - 4676 + g 95 -7 -5.24129 | overlap 4664 ACGGGTGATGGCCTT CAGCGC CCG GCGCAG TTTTTTATGCGAGAG TERM 14 4761 - 4725 - G 70 -10 -3.14344 | CACGTCTTCCAGTAA CACGTCCCGGATACCG CAGGC CAGAAGCCGGGGCGTG TCACCGTCAAATAAT TERM 15 4821 - 4862 + g 85 -3 -5.40072 | gap 1, overlap 4823 AGCCTCATCCAGCGT GGGCAGGTTCAGATAAATG GACAG CGCTTGTCTGG-CCTGCGC TTTTTTTGCCGCCAG traX 5834 - 5088 - | type IV secretion-like conjugative transfer system pilin acetylase TraX TERM 16 5160 - 5146 - G 74 -2.8 -5.01732 | overlap 5148 AACGTCGGGAAAAAA TCTCCG GGC CAGAAA CGGGGTAATGATTTC traI 11124 - 5854 - | type IV secretion-like conjugative transfer relaxase protein TraI TERM 17 5910 - 5935 + g 100 -13.4 -4.07568 | CCATATCCCGCTCCA TCTGCTGCAG ACGCTC CTGCAGCAGA TTTTCCCGGGCAACC TERM 18 8986 - 8996 + g 86 -6.8 -5.00616 | overlap 8980 CAGACGCTCGCCGTC TGCC ACC GGCA TTTTTTCCGGCCGGA TERM 19 9576 - 9588 + g 70 -4.1 -4.60487 | overlap 9573 GCAGGGTTAACGTCT CTTTC AGG GAGAG TTTTTCGCCCTGGTC traD 13295 - 11124 - | type IV secretion-like conjugative transfer system coupling protein TraD TERM 20 13484 - 13445 - R 75 -9.4 -3.55761 | opp_overlap 13454 13458, overlap 13458 TATTTATTTCGGAAA CGCCGGGGAGAAATAAAA TTTA TTTTATTTCTTTCCGGGG TTGGACAACGAGCAA traT 14279 - 13548 - | type IV secretion-like conjugative transfer system complement resistance protein TraT TERM 21 14085 - 14103 + g 78 -5.3 -4.8048 | GCCCTGCAGCCCACT CATGTCT TTATC AGACGTG TTTTTGATCTGCAGA EcSMS35_A0013 14808 - 14311 - | putative type IV secretion-like conjugative transfer system protein TraS traG 17651 - 14829 - | type IV secretion-like conjugative transfer system protein TraG TERM 22 16125 - 16111 - G 73 -9.2 -3.57971 | ATACCGACCGGTAAA CGGGAC ATC GCCCCG CTCGCATCCATCACC TERM 23 17075 - 17054 - G 72 -8 -3.86015 | gap 1 TATTGCTGTCATAAA CGCCCC-GT AGCGG ACTGGGGCG GGAAAAAATCAGCGT traH 19024 - 17648 - | type IV secretion-like conjugative transfer system pilus assembly protein TraH trbJ 19383 - 19021 - | type IV secretion-like conjugative transfer system protein TrbJ trbB 19858 - 19313 - | type IV secretion-like conjugative transfer system pilus assembly thiol-disulfide isomerase TrbB traQ 20129 - 19845 - | type IV secretion-like conjugative transfer system pilin chaperone TraQ trbA 20595 - 20248 - | type IV secretion-like conjugative transfer system protein TrbA TERM 24 20435 - 20425 - G 72 -6.8 -4.1523 | overlap 20430 TGCACCACACAGAAA CCAG AGA CTGG CAGTCAGCACATATA traF 21354 - 20611 - | type IV secretion-like conjugative transfer system pilus assembly protein TraF TERM 25 21207 - 21237 + g 79 -3.9 -5.098 | gap 1 GTTTCTGCATAATAT CCGGTTCCTGACGG GGGG CTG-CAGGTACAGG TTTATTTTCTTTTTC trbE 21604 - 21347 - | type IV secretion-like conjugative transfer system protein TrbE traN 23439 - 21631 - | type IV secretion-like conjugative transfer system mating-pair stabilization protein TraN TERM 26 21953 - 21963 + g 75 -5.4 -4.67692 | overlap 21947 CAGAACTCTCCGACA CTGA CGG TCAG TTTGTTTGATTTTGC trbC 24074 - 23436 - | type IV secretion-like conjugative transfer system pilus assembly protein TrbC TERM 27 23910 - 23933 + g 70 -4.4 -4.58283 | overlap 23922 CACCTGTTTCTCCGC CCAGGCCTTC AGCT GATGGTCAGG TTTTTCACGCAGTTG EcSMS35_A0024 24554 - 24102 - | hypothetical protein EcSMS35_A0025 25045 - 24584 - | hypothetical protein traU 26063 - 25071 - | type IV secretion-like conjugative transfer system protein TraU traW 26692 - 26060 - | type IV secretion-like conjugative transfer system protein TraW TERM 28 26128 - 26105 - G 70 -10.2 -3.15544 | TTCCACCTTCAGGAA GCGATCGCCG GGAA CGGCGCTCAC CCGTGCCGGGACCTG trbI 27075 - 26689 - | type IV secretion-like conjugative transfer system protein TrbI traC 29699 - 27072 - | type IV secretion-like conjugative transfer system protein TraC TERM 29 28527 - 28516 - G 70 -5.8 -4.18094 | GAAATCAGCTCAAAA CCGT TTTT ACGG AAGCTGTTCAGGATG TERM 30 29175 - 29185 + g 100 -4.6 -5.7946 | opp_overlap 29175 TTCCATTTCCAGAAT GTCG GCC CGGC TTTTTTTCTTCGAGG traR 30080 - 29859 - | type IV secretion-like conjugative transfer system protein TraR TERM 31 30196 - 30174 - R 72 -6.8 -4.2074 | opp_overlap 30178, overlap 30175 TTTTGAATACAGAAA GCCCGCCGGC ATT GCCGGCTGAT ATACAACTTCAGGGC TERM 32 30195 - 30175 - R 73 -10.3 -3.11962 | opp_overlap 30178, overlap 30174 TTTGAATACAGAAAG CCCGCCGGC ATT GCCGGCTGA TATACAACTTCAGGG TERM 33 30178 - 30192 + r 81 -12.8 -2.63631 | opp_overlap 30175 30174 GAATACAGAAAGCCC GCCGGC ATT GCCGGC TGATATACAACTTCA traV 30730 - 30215 - | type IV secretion-like conjugative transfer system protein TraV TERM 34 30534 - 30563 + g 78 -9.1 -3.9941 | overlap 30547 CGGAAGTTCCCTTCA GCCAGGCGCGGCA GTGA TGCCGCAACCGGC TTTGCTTCTGAGGAC EcSMS35_A0032 30978 - 30727 - | putative type IV secretion-like conjugative transfer system protein TrbG TERM 35 30778 - 30791 + g 70 -3.8 -4.64766 | ATCATTCTTCAAATC CCTG ACCGTA CAGG TTTTTACAATGTCAG EcSMS35_A0033 31292 - 30975 - | putative type IV secretion-like conjugative transfer system protein TrbD traP 31861 - 31289 - | type IV secretion-like conjugative transfer system protein TraP traB 33278 - 31851 - | type IV secretion-like conjugative transfer system protein TraB TERM 36 32776 - 32766 - G 81 -8.2 -4.37092 | ATTCCCGGGATAAAA CGCC GTC GGCG GTGGAACAGCAACGC traK 34006 - 33278 - | type IV secretion-like conjugative transfer system secretin TraK TERM 37 33502 - 33490 - G 72 -10.5 -3.10344 | opp_overlap 33491 CTGCCACTGAAGACA GCCCC GCC GGGGC CTGCAGGGTTTCCTT TERM 38 33786 - 33774 - G 71 -10.5 -2.86164 | opp_overlap 33769 33774 GTGGCAACCACCACA CCGCC GGA GGCGG TCTGCTCATTATTGG TERM 39 33774 - 33786 + g 71 -10.5 -2.89421 | opp_overlap 33774, overlap 33769 GTGGCAACCACCACA CCGCC GGA GGCGG TCTGCTCATTATTGG traE 34559 - 33993 - | type IV secretion-like conjugative transfer system protein TraE traL 34892 - 34581 - | type IV secretion-like conjugative transfer system protein TraL traA 35266 - 34907 - | type IV secretion-like conjugative transfer system pilin TraA traY 35527 - 35300 - | type IV secretion-like conjugative transfer system protein TraY TERM 40 35588 - 35609 + r 76 -8.7 -3.98804 | opp_overlap 35590, overlap 35590 AAACCGACGAAAAAA AACACGCCA AAAT TGGCGTGTC TTATTTAACATTTAC TERM 41 35590 - 35607 + r 87 -11.3 -3.57619 | opp_overlap 35590, overlap 35588 ACCGACGAAAAAAAA CACGCCA AAAT TGGCGTG TCTTATTTAACATTT TERM 42 35607 - 35590 - R 100 -11.3 -5.86965 | opp_overlap 35590 35588 ACCGACGAAAAAAAA CACGCCA AAAT TGGCGTG TCTTATTTAACATTT traJ 36307 - 35621 - | type IV secretion-like conjugative transfer system regulator TraJ TERM 43 36335 - 36373 + r 100 -12.4 -4.37198 | overlap 36336 36337 TAAGGATTCTATGGA CAGTCGATGCAGGGAGGT CTG AACTCCCTGCATCGGCGA TTTTCAGTTTCAATT TERM 44 36336 - 36372 + r 100 -15.9 -3.21234 | overlap 36335 36337 AAGGATTCTATGGAC AGTCGATGCAGGGAGGT CTG AACTCCCTGCATCGGCG ATTTTCAGTTTCAAT TERM 45 36337 - 36371 + r 100 -19.4 -2.52017 | overlap 36336 36335 AGGATTCTATGGACA GTCGATGCAGGGAGGT CTG AACTCCCTGCATCGGC GATTTTCAGTTTCAA traM 36881 - 36498 - | type IV secretion-like conjugative transfer system protein TraM TERM 46 37090 - 37109 + H 93 -12.2 -3.81951 | GCCATAGGGTCGCCA TAGGGTCG TCAA CGACCCTA TTTAATAATGTAAAA TERM 47 37472 - 37428 - g 100 -23.1 -3.98075 | opp_overlap 37429 37445 ATATCATGGAAAGAA TCCCGTTACCGGGTTAATGCC ATC GGTATTAATCCGGTAACGGGA TATGGCAGCGGACTG EcSMS35_A0043 37158 - 37805 + | transglycosylase SLT domain-containing protein EcSMS35_A0044 37965 - 37831 - | hypothetical protein TERM 48 38051 - 38104 + r 100 -31.7 -2.56314 | opp_overlap 38051, overlap 38057 38062 38067 AGCAATGCCGAAAAA TGATAATATAAGTAAAGCCCCGAAA ATTT TTTCGGGGCTTTACTTATATTATCA TGACTTCCACTTTCT TERM 49 38104 - 38051 - R 100 -31.7 -4.62872 | opp_overlap 38051 38057 38062 38067 AGCAATGCCGAAAAA TGATAATATAAGTAAAGCCCCGAAA ATTT TTTCGGGGCTTTACTTATATTATCA TGACTTCCACTTTCT TERM 50 38057 - 38098 + r 100 -24.9 -3.44319 | opp_overlap 38051, overlap 38051 38062 38067 GCCGAAAAATGATAA TATAAGTAAAGCCCCGAAA ATTT TTTCGGGGCTTTACTTATA TTATCATGACTTCCA TERM 51 38062 - 38093 + r 100 -20.4 -3.77808 | opp_overlap 38051, overlap 38057 38051 38067 AAAATGATAATATAA GTAAAGCCCCGAAA ATTT TTTCGGGGCTTTAC TTATATTATCATGAC TERM 52 38067 - 38088 + r 100 -14.5 -4.09827 | opp_overlap 38051, overlap 38062 38057 38051 GATAATATAAGTAAA GCCCCGAAA ATTT TTTCGGGGC TTTACTTATATTATC EcSMS35_A0045 38923 - 38102 - | hypothetical protein EcSMS35_A0046 39333 - 39046 - | hypothetical protein EcSMS35_A0047 39519 - 39358 - | hypothetical protein EcSMS35_A0048 39812 - 39600 - | hypothetical protein EcSMS35_A0049 39957 - 39805 - | hypothetical protein TERM 53 40082 - 40058 - R 100 -15.7 -4.08692 | opp_overlap 40061, overlap 40061 GAAGGCGGGGGAAAA GAACGGGCGCC GCA GGCGCGCGTTC ATCCCCGTTCCTGAA TERM 54 40061 - 40079 + r 81 -11.6 -3.16921 | opp_overlap 40061 40058 GGCGGGGGAAAAGAA CGGGCGCC GCA GGCGCGCG TTCATCCCCGTTCCT TERM 55 40079 - 40061 - R 93 -11.6 -4.17048 | opp_overlap 40061, overlap 40058 GGCGGGGGAAAAGAA CGGGCGCC GCA GGCGCGCG TTCATCCCCGTTCCT TERM 56 40182 - 40157 - R 100 -14.7 -4.08546 | opp_overlap 40157 40178, overlap 40175 ATCAGCAAGGAGAAA GGGGCTACCGG CGAA CCAGCAGCCCC TTTATAAAGGCGCTT TERM 57 40157 - 40182 + r 82 -10.3 -3.86194 | opp_overlap 40157 40175, overlap 40178 ATCAGCAAGGAGAAA GGGGCTACCGG CGAA CCAGCAGCCCC TTTATAAAGGCGCTT TERM 58 40245 - 40228 - R 100 -14.1 -4.10161 | opp_overlap 40220 CATCAGTCCTGAAAA GGCGGGC CTGC GCCCGCC TCCAGGTTGCTACTT hok 40413 - 40255 - | stable plasmid inheritance protein Hok TERM 59 40319 - 40329 + g 75 -6.8 -4.35116 | opp_overlap 40318 TCTCTGTAACGAATC TCGC ACA GCGA TTTTCGTGTCAGATA TERM 60 40475 - 40520 + r 78 -8.6 -4.06419 | gap 2, overlap 40478 TGGACTAGACATAGG GAT-GCCTCGTGGT-GGTTAAT GAAA ATTAACTTACTACGGGGCTATC TTCTTTCTGCCACAC TERM 61 40478 - 40516 + r 76 -10.5 -3.38699 | gap 1, overlap 40475 ACTAGACATAGGGAT GCCTCGTGGT-GGTTAAT GAAA ATTAACTTACTACGGGGC TATCTTCTTTCTGCC EcSMS35_A0051 40693 - 40556 - | hypothetical protein psiA 41412 - 40693 - | plasmid SOS inhibition protein PsiA TERM 62 40964 - 40995 + g 100 -13 -4.02334 | gap 1 GCCAGTTCGATTTCA GCCTGAGCG-ACCAG CGC CTGGTACGCACGGGC TTTCTGCTCTGCCTC psiB 41843 - 41409 - | plasmid SOS inhibition protein PsiB TERM 63 41857 - 41890 + r 79 -9.5 -3.71848 | gap 1, overlap 41860 41863 ATCACGGTATCTCCC TTGCTGCCGCCCCGTC TCC GGCGGGGCGGT-GTGG TTGTTCATCAGGCGG TERM 64 41863 - 41885 + r 100 -18.4 -3.03203 | overlap 41857 41860 GTATCTCCCTTGCTG CCGCCCCGTC TCC GGCGGGGCGG TGTGGTTGTTCATCA EcSMS35_A0054 43862 - 41898 - | ParB-like partition protein TERM 65 42079 - 42096 + g 70 -4.1 -4.64766 | gap 1 CCGGCCTCATTCAGG GCTGC-GA TAA TCTGCGGC TTTTTCAGGTGTCCG TERM 66 42312 - 42341 + g 85 -7.1 -4.85599 | gap 1 CATGTCCCGTGACCA TCCC-TCCGGCAGC AGG GCTGCAAGACGGGA TTTTTCTGCCATCAG TERM 67 42964 - 42981 + g 75 -11.3 -3.01712 | GCGCACCATTCCCAG CCTTCGG CTTC CCGAAGG TGTTCAGCGACAGCC TERM 68 43782 - 43795 + g 72 -4.5 -4.64657 | overlap 43753 43783 CAGCAGGGCAGACAG TGCAG TTTC CTGCG TTTTTACAGATTTAC TERM 69 43884 - 43909 + r 74 -11.1 -2.50699 | overlap 43883 43881 ATAATTGCTTATGTC CTGCCGGACGT TCGC GCGTCCGGCAC CTCTCTTACTTAAGA EcSMS35_A0055 44148 - 43915 - | hypothetical protein ssb1 44731 - 44204 - | plasmid-derived single-stranded DNA-binding protein TERM 70 44904 - 44961 + r 83 -10.9 -3.60098 | opp_overlap 44913 44920, overlap 44920 CTGACGCACCTGTCC TGGGCAGAACGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTGGGCTGTTCA TTTACCCTGGACAGT TERM 71 44952 - 44913 - R 74 -9.6 -3.28712 | opp_overlap 44904 44920, overlap 44920 CTGTCCTGGGCAGAA CGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTG GGCTGTTCATTTACC TERM 72 45195 - 45165 - R 70 -9.7 -2.87564 | gap 2 CCACGGCGCGACAGA GGC-GGC-GCGACCG GAA CGGTCGCTGCAAGCC CGGGGTTTTCACGCA TERM 73 45321 - 45278 - R 91 -13 -3.14132 | CGGGTGCGCCAGCAA CTGCCTGTCGGAGTCGGGCC TGAC GACCGGATGCCGCCAGGCAG CCGGGAGCCGAAGGT EcSMS35_A0057 45622 - 45374 - | hypothetical protein TERM 74 45523 - 45546 + g 100 -15.2 -3.53012 | opp_overlap 45494 45523 GTCCGCGTAATGAAA GGGGCGGCGC GTGA GCGCGGCCCC TTTCAGCGCCACCGG TERM 75 45546 - 45523 - G 100 -15.2 -3.90112 | opp_overlap 45523, overlap 45494 GTCCGCGTAATGAAA GGGGCGGCGC GTGA GCGCGGCCCC TTTCAGCGCCACCGG EcSMS35_A0058 46185 - 45622 - | hypothetical protein TERM 76 45697 - 45670 - G 78 -9.1 -3.99678 | gap 1 ATCGGTATAAGCAAA CGTGCCGCGCGG CAGCT CCTCGCGG-ACG TCAGAAAACGGTAAC TERM 77 46107 - 46095 - G 90 -7.7 -4.88736 | CAGGAGTCACAAAAA GCTGA GAT TCAGC CCGGATTTCAGCAAC EcSMS35_A0059 47592 - 46231 - | hypothetical protein TERM 78 47043 - 47058 + g 74 -7.6 -4.0616 | TGATACGACGCCAGC GAACGT CCGG ACGTTC TTTATACTTCGCGTG TERM 79 47130 - 47146 + g 76 -7.9 -4.1899 | GTTCAACGAGCATCA CGGCACG TTT CATGCCG TTTTCAATACGCTGC EcSMS35_A0060 47874 - 47644 - | hypothetical protein TERM 80 47965 - 47949 - H 86 -12.3 -3.14344 | opp_overlap 47949 TACGGCGTGGATTAA GCAGGTC CCT GACCTGC TTTTTTCATATCTGC TERM 81 47949 - 47965 + H 100 -12.3 -5.24989 | opp_overlap 47949 TACGGCGTGGATTAA GCAGGTC CCT GACCTGC TTTTTTCATATCTGC TERM 82 48245 - 48302 + G 81 -10.9 -3.60098 | gap 1, opp_overlap 48254 48261, overlap 48261 CTGACGCACCTGTCC TGGGCAGAACGCAAAATTTTTTA-CCGG GTT CTGGGTAAAAAATTTTGTGGGCTGTTCA TTTACCCTGGACAGT EcSMS35_A0061 48137 - 48394 + | hypothetical protein EcSMS35_A0062 48738 - 48448 - | hypothetical protein TERM 83 48794 - 48747 - R 100 -22 -3.26545 | opp_overlap 48758 CGGACACATCACTAA CGGGAAGGGTAACGGGCGACGC GTCA GCGTGGCCCGCTTCCCTTCCGG CAGGCGTCAGCCTGC TERM 84 48758 - 48783 + r 74 -10.3 -3.17075 | opp_overlap 48747 CTAACGGGAAGGGTA ACGGGCGACGC GTCA GCGTGGCCCGC TTCCCTTCCGGCAGG EcSMS35_A0063 49050 - 48868 - | hypothetical protein EcSMS35_A0064 49421 - 49050 - | hypothetical protein TERM 85 49482 - 49502 + r 86 -13.9 -2.57244 | overlap 49477 TCTCGTCTCCTTTAC AGGGGCGGC ATT GCCGCCCCG TCCGTTAATCAGTCC EcSMS35_A0065 49936 - 49511 - | putative antirestriction protein EcSMS35_A0066 50016 - 50186 + | hypothetical protein EcSMS35_A0067 50338 - 51309 + | IS110 family transposase EcSMS35_A0068 51865 - 51362 - | IS1 transposase orfB EcSMS35_A0069 52088 - 51876 - | IS1 transposase orfA TERM 86 52538 - 52524 - R 70 -6.4 -4.24963 | overlap 52515 TAGAATCATTTAAAA TGTCGA TGC CCGACA CGAGAGATATCTCGC EcSMS35_A0070 52657 - 52514 - | hypothetical protein EcSMS35_A0071 53036 - 52623 - | hypothetical protein TERM 87 52771 - 52753 - GR 100 -14.6 -3.3344 | ACTGAACCCCCACAA GGCCATGC TCC GCATGGCC GGGTAAAGCGGAGCC TERM 88 52850 - 52832 - GR 100 -16 -4.72986 | opp_overlap 52825 GACCGGCAGGAAAAA GGCGGGGA TTT TCCCCGCC ATCGTCATCATTTCC TERM 89 53572 - 53555 - R 91 -11.3 -3.7697 | opp_overlap 53554 53549 AGACCGACAATACAA CTGGGAC CGTG GTCCCAG ATATAATATTCAGGC sopB 54635 - 53664 - | plasmid partition protein SopB sopA 55810 - 54635 - | plasmid partition protein SopA EcSMS35_A0074 56604 - 56101 - | IS1 transposase orfB EcSMS35_A0075 56827 - 56615 - | IS1 transposase orfA TERM 90 56916 - 56897 - R 87 -8.6 -4.49556 | opp_overlap 56897 TGGGCATTAAACAAA TCCCACTC TGAA AAGTGGGA TTTTAAGGAGCATCA TERM 91 56897 - 56916 + r 74 -7.9 -4.08216 | opp_overlap 56897 TGGGCATTAAACAAA TCCCACT CTGAAA AGTGGGA TTTTAAGGAGCATCA EcSMS35_A0076 58456 - 56954 - | hypothetical protein TERM 92 58656 - 58644 - R 81 -6.3 -5.02287 | opp_overlap 58643 GATAAAAATATAAAA CTTTG TGT CAAAG ACTTGTTACGAGATA TERM 93 58803 - 58785 - R 86 -2.2 -5.67967 | opp_overlap 58790, overlap 58786 AGTACCACAAAAAAA GCCCCCCC CCT GGATGGGA GTGTAGTTATCGTCT TERM 94 58978 - 58998 + r 73 -2.5 -5.09895 | opp_overlap 58970 58978, overlap 58980 CCGGAAAGCCAAAAA GCCCAAC CTCACCA GTTGGAC TTTTTTACCTGAATG TERM 95 58998 - 58978 - R 76 -5.4 -4.81249 | opp_overlap 58978 58980, overlap 58970 CCGGAAAGCCAAAAA GCCCAACC TCACC AGTTGGAC TTTTTTACCTGAATG EcSMS35_A0077 59481 - 59056 - | hypothetical protein EcSMS35_A0078 59638 - 60102 + | hypothetical protein TERM 96 60143 - 60115 - T 85 -11.7 -3.28924 | TAGCGCTGGGCAGAA TTCCCTGGCTGTC CAG GTGAGCCAGGGAA TTAAACGAAGGTGTA TERM 97 60178 - 60165 - T 83 -3.7 -5.43866 | opp_overlap 60165 60169 GAAGGTGTAAAAAAA GTCGC TGGC GCGGC TAGTTTGATGTTCTT EcSMS35_A0079 60372 - 60178 - | hypothetical protein EcSMS35_A0080 60602 - 60793 + | hypothetical protein sitD_1 62243 - 61386 - | iron/manganese transport system membrane protein SitD sitC_1 63097 - 62240 - | iron/manganese transport system membrane protein SitC TERM 98 62303 - 62290 - G 74 -8.1 -4.10161 | GACGATTTGCCAAAA GCCCA TGGG TGGGC GCAAAGACAAATGCT sitB_1 63921 - 63094 - | iron/manganese transport system membrane protein SitB sitA_1 64835 - 63921 - | iron/manganese transport system periplasmic binding protein SitA EcSMS35_A0085 65162 - 65374 + | IS1 transposase orfA EcSMS35_A0086 65385 - 65888 + | IS1 transposase orfB EcSMS35_A0089 67112 - 67288 + | hypothetical protein EcSMS35_A0090 67356 - 67667 + | hypothetical protein EcSMS35_A0091 67680 - 67862 + | hypothetical protein TERM 99 67974 - 67960 - gT 76 -3.5 -4.93898 | ACATCAGTATAAAAA TGCCC GTCAG GAGCA TACCAGCCTGCCGAA TERM 100 68476 - 68437 - gT 93 -12.3 -3.47494 | gap 2 ATTGAACTACTACAA CAGCGTCAGACCTCACCAT TATA ACGGTG-GG-CTGACGCCG GAAGAGTCAGAGAAC EcSMS35_A0092 67787 - 68533 + | integrase core subunit EcSMS35_A0093 68778 - 68554 - | hypothetical protein EcSMS35_A0094 68915 - 69085 + | hypothetical protein repA 69078 - 70055 + | repFIB replication protein A TERM 101 70103 - 70059 - T 89 -14.6 -3.0264 | opp_overlap 70059 70062 70063, overlap 70063 AAATCCCGCTGAACA TAAACTGTAGTCAGTGAAGA GCGCT CCTTTACTGACTACAGCTTA TATTAACCGGTGCAG TERM 102 70059 - 70103 + T 87 -13.9 -3.03124 | opp_overlap 70059 70063, overlap 70062 70063 AAATCCCGCTGAACA TAAACTGTAGTCAGTGAAG AGCGCTC CTTTACTGACTACAGCTTA TATTAACCGGTGCAG TERM 103 70062 - 70100 + T 87 -11.2 -3.66288 | opp_overlap 70059 70063, overlap 70059 70063 TCCCGCTGAACATAA ACTGTAGTCAGTGAAG AGCGCTC CTTTACTGACTACAGC TTATATTAACCGGTG TERM 104 70099 - 70063 - T 100 -13.2 -4.1891 | opp_overlap 70063 70062 70059, overlap 70059 CCCGCTGAACATAAA CTGTAGTCAGTGAAGA GCGCT CCTTTACTGACTACAG CTTATATTAACCGGT TERM 105 70063 - 70099 + T 89 -14.7 -2.79452 | opp_overlap 70059 70063, overlap 70062 70059 CCCGCTGAACATAAA CTGTAGTCAGTGAAG AGCGCTC CTTTACTGACTACAG CTTATATTAACCGGT TERM 106 70113 - 70139 + T 79 -8 -4.36854 | overlap 70114 AGCTTATATTAACCG GTGCAGTGAGTG GTC TGCTCACTGCAG TTTATATTCTGTTTC TERM 107 70114 - 70138 + T 81 -11.5 -3.20486 | overlap 70113 GCTTATATTAACCGG TGCAGTGAGTG GTC TGCTCACTGCA GTTTATATTCTGTTT EcSMS35_A0096 71080 - 70340 - | site-specific recombinase TERM 108 70752 - 70774 + g 90 -9 -4.56775 | overlap 70754 ACTTCATCTTTTGGC GGGCGTCCGC GTC GCGCACGCAC TTTTTCGGACAGGAT TERM 109 71243 - 71253 + r 70 -6.8 -4.08945 | AGGCGCGTTTTGCCG CAGG GAT CCTG TTTTAAGCCAGTCAT TERM 110 71657 - 71628 - R 100 -12.5 -4.3014 | opp_overlap 71636 ATATAGTTATCAAAA TACATTAATTTCA AATT TGAAATTAATGTA AAACGATTTAGTAAA EcSMS35_A0097 72671 - 71763 - | Mig-14 family protein TERM 111 72300 - 72324 + g 82 -2.9 -5.22481 | TTGTTTTTTTCTGGC TATTTTCCATG TTG CATTGATAATA TTTTGTTTATTTATA hlyF 73843 - 72734 - | hemolysin F TERM 112 74225 - 74191 - R 81 -3.6 -5.35459 | opp_overlap 74192, overlap 74192 ACATATTATAAAAAA TCAAAAGACCACCA TCAGAAG TGCTGGCCTTTTGT TTATCATATTTAAAG ompT 75229 - 74276 - | outer membrane protease 7 EcSMS35_A0100 75333 - 75722 + | hypothetical protein EcSMS35_A0101 76844 - 77170 + | IS629 transposase orfA TERM 113 77490 - 77478 - g 70 -4.8 -4.56597 | TCTCCGTGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC EcSMS35_A0102 77170 - 78057 + | IS629 transposase orfB TERM 114 78110 - 78072 - f 73 -5.2 -4.61199 | overlap 78074 AGTTCACAGATAAAA CACTCTCCAGGAAACCCG GGG CGGTTCACCTACAGAGTA CCGCTACCACTTGTG EcSMS35_A0103 78501 - 78713 + | IS1 transposase orfA EcSMS35_A0104 78724 - 79227 + | IS1 transposase orfB EcSMS35_A0105 80400 - 80119 - | hypothetical protein TERM 115 80786 - 80730 - H 100 -17.7 -3.33214 | opp_overlap 80738 80741 80747, overlap 80741 80747 AGTTGAATCACAAGA TCATAAAATAATTAAAAGGAAGGCAGT GTT ACTGCCTCCCTTTAAAATATTTAATGA CAAGCAATGGCATCA TERM 116 80738 - 80778 + H 91 -11.3 -3.72576 | opp_overlap 80730 80741 80747, overlap 80741 80747 CACAAGATCATAAAA TAATTAAAAGGAAGGCAGT GTT ACTGCCTCCCTTTAAAATA TTTAATGACAAGCAA TERM 117 80741 - 80775 + H 84 -13 -2.66695 | opp_overlap 80730 80741 80747, overlap 80738 80747 AAGATCATAAAATAA TTAAAAGGAAGGCAGT GTT ACTGCCTCCCTTTAAA ATATTTAATGACAAG TERM 118 80775 - 80741 - H 100 -15.2 -4.37552 | opp_overlap 80741 80738 80747, overlap 80730 80747 AAGATCATAAAATAA TTAAAAGGAAGGCAGT GTT ACTGCCTCCCTTTAAA ATATTTAATGACAAG TERM 119 80747 - 80769 + H 89 -12 -3.69902 | opp_overlap 80741 80730 80747, overlap 80741 80738 ATAAAATAATTAAAA GGAAGGCAGT GTT ACTGCCTCCC TTTAAAATATTTAAT TERM 120 80769 - 80747 - H 100 -14.2 -4.68479 | opp_overlap 80747 80741 80738, overlap 80741 80730 ATAAAATAATTAAAA GGAAGGCAGT GTT ACTGCCTCCC TTTAAAATATTTAAT EcSMS35_A0108 80919 - 81329 + | IS2 transposase orfA EcSMS35_A0110 81287 - 82192 + | IS2 transposase orfB TERM 121 82885 - 82930 + G 73 -4.2 -4.78848 | gap 1, opp_overlap 82902 82903 82907 AACCTTAACTGTTCA TGCACCATCACCATCAACT AACTTACCA AGTT-ATGGCAATGGTGCA TTTTCTCTTTCAGCA cma 82865 - 83680 + | colicin-M TERM 122 83703 - 83686 - T 75 -8.3 -3.77639 | opp_overlap 83687, overlap 83681 83687 TAAGCGATAATATAA GGGCCGG GATT CCGGCCT TTTTATGCAGCCTTT TERM 123 83687 - 83702 + T 100 -11.8 -4.84017 | opp_overlap 83686 83681 83687 AAGCGATAATATAAG GGCCGG GATT CCGGCC TTTTTATGCAGCCTT TERM 124 83702 - 83687 - T 80 -11.8 -2.85861 | opp_overlap 83687, overlap 83686 83681 AAGCGATAATATAAG GGCCGG GATT CCGGCC TTTTTATGCAGCCTT cmi 84155 - 83730 - | colicin-M immunity protein Cmi TERM 125 84263 - 84230 - R 73 -9.1 -3.48276 | opp_overlap 84230 84233 84234 84234, overlap 84234 TCTTCTTTTATAGAA TAAATCACAATTCAT AATT ATGATTTGTGACTTA TGCGTGTCTGTTTTT TERM 126 84259 - 84234 - R 79 -7.7 -4.38927 | opp_overlap 84230 84233 84234 84234, overlap 84230 CTTTTATAGAATAAA TCACAATTCAT AATT ATGATTTGTGA CTTATGCGTGTCTGT resD 85037 - 84261 - | resolvase TERM 127 84329 - 84315 - G 70 -5.6 -4.30014 | overlap 84317 CTCAGGAATCGAAAA CTGCAC CCG GTGCCG TGCAGCCACATCCAG EcSMS35_A0114 85348 - 85049 - | hypothetical protein TERM 128 85329 - 85352 + g 72 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 129 85656 - 85680 + G 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 130 85811 - 85790 - g 72 -7.9 -3.98172 | gap 1, opp_overlap 85790 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC EcSMS35_A0115 85355 - 86077 + | IS26 transposase TERM 131 86814 - 86837 + F 73 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 132 87141 - 87165 + G 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 133 87296 - 87275 - g 72 -7.9 -3.98172 | gap 1, opp_overlap 87275 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC EcSMS35_A0116 86840 - 87562 + | IS26 transposase TERM 134 87684 - 87658 - T 100 -9.5 -6.18768 | gap 1, opp_overlap 87658 AAAATATAAAAAAAA GCCACCA-ATCC TGCC GGATACGGTGGC TTAAATACAGAATTA cmlA 88347 - 87706 - | chloramphenicol acetyltransferase 2 TERM 135 88465 - 88490 + r 93 -10.5 -5.09762 | opp_overlap 88459 88457, overlap 88459 88458 88466 GTAATAATACCCGAT ACGGGCTTAAT CTGT ATTAAGCCCGG TTTTATTTATTCCGG TERM 136 88466 - 88489 + r 100 -14 -3.64772 | opp_overlap 88459 88457, overlap 88459 88458 88465 TAATAATACCCGATA CGGGCTTAAT CTGT ATTAAGCCCG GTTTTATTTATTCCG EcSMS35_A0118 88997 - 88497 - | hypothetical protein TERM 137 89033 - 89056 + H 73 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 138 89360 - 89384 + G 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 139 89515 - 89494 - g 72 -7.9 -3.98172 | gap 1, opp_overlap 89494 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC EcSMS35_A0119 89059 - 89781 + | IS26 transposase TERM 140 90010 - 90024 + T 74 -7.1 -4.208 | overlap 90002 TCAAATCGCCTGTAA CAGCC TTTCT GGCTG TTTGTCGTTTTCAGA EcSMS35_A0120 91242 - 90229 - | integrase/recombinase TERM 141 90582 - 90556 - G 74 -10.1 -3.5616 | gap 1, opp_overlap 90555 CGCAAAAACCCAGAA CCACG-GCCAGG AATG CCCGGCGCGCGG ATACTTCCGCTCAAG dhfrV 91389 - 91871 + | dihydrofolate reductase type 5 TERM 142 91897 - 91920 + F 73 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 143 92224 - 92248 + G 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 144 92379 - 92358 - g 72 -7.9 -3.98172 | gap 1, opp_overlap 92358 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC EcSMS35_A0122 91923 - 92645 + | IS26 transposase TERM 145 92786 - 92812 + F 100 -15.2 -3.14132 | ATGCTGTCGGTAATG GGCGCGTTCG CCGAGTT CGAACGCGCC TTGATCCGCGAGCGG TERM 146 93132 - 93178 + G 87 -14.3 -3.10522 | gap 1, overlap 93172 CGACCTCTCCATCAT CCGGCAGCGGCGCGGCCCGGCC AACC GGCTGGGCTTCGCCG-TGCAGC TCTGTTACCTGCGCT TERM 147 93261 - 93247 - g 74 -10 -3.53012 | CCGCCCTTGTTGAAA CTGGTC GCC GACCAG CTCAAGGTCAGCGTC TERM 148 94427 - 94413 - g 70 -10 -3.25823 | GCTGTCGGAGATGAA GAACGC GTT GCGTTC CGGCGACATCTGGGT TERM 149 94524 - 94498 - g 78 -10.9 -3.53012 | overlap 94515 GTGCCGCCCGCGAAA TTCGCCAGCCT CAAGC AGGCCAGCGAA TTGCCGCTGGCCGTG TERM 150 94536 - 94515 - g 85 -13.7 -2.72344 | overlap 94498 CGCCAGCCTCAAGCA GGCCAGCGA ATTG CCGCTGGCC GTGGCCACCGACTGC TERM 151 94686 - 94670 - g 70 -10.8 -2.74192 | overlap 94667 CAGGCTTGAAGATCA CGCCGC TCGAC GCGGCG GTACCCGACACCGCC TERM 152 95675 - 95691 + G 70 -4.3 -4.57073 | opp_overlap 95659, overlap 95673 GCGAGGCGCGCAATG CGCTGGC CAG GGCAGTG TTTTTCAACCGCCTG EcSMS35_A0124 93016 - 95982 + | Tn3 family transposase TERM 153 96930 - 96919 - g 83 -5.8 -4.99035 | overlap 96927 GTATTCATACAAAAA CTGG AACA CCAG TCTGGCAAGTTGGCC EcSMS35_A0125 96061 - 97065 + | IS5075 transposase EcSMS35_A0126 97562 - 97744 + | hypothetical protein TERM 154 98274 - 98286 + G 82 -3.3 -5.24531 | overlap 98275 CCGCCTTGTCCTTGA TCCCG GCA TGGGG TTTTTTCTGGGGGCT sul2 97753 - 98568 + | dihydropteroate synthase type-2 strA 98629 - 99432 + | aminoglycoside resistance protein A TERM 155 100139 - 100165 + G 72 -10.2 -3.38564 | gap 1, overlap 100128 GCTGGACGTCGATCC GCGT-CGCCTG CTCGAC CAGGCGTACGC TTATGGGTGCCTTTC strB 99438 - 100268 + | aminoglycoside resistance protein B TERM 156 100434 - 100417 - T 76 -5.6 -4.79223 | opp_overlap 100417 TGAGATTATCAAAAA GGATCT TCACCT AGATCC TTTTAAATTAAAAAT blaT 101359 - 100499 - | beta-lactamase TEM TERM 157 101842 - 101865 + H 73 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 158 102169 - 102193 + G 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 159 102324 - 102303 - g 72 -7.9 -3.98172 | gap 1, opp_overlap 102303 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC EcSMS35_A0132 101868 - 102590 + | IS26 transposase sat 102959 - 104038 + | streptothricin acetyltransferase Sat-1 TERM 160 104113 - 104063 - f 75 -10.7 -2.88118 | gap 2, overlap 104062 GCACCGTACAACAAG TTGCTGCACCGGAAAAATTACTCGC TGC GCTCGCAATTTT-CCGGTG-AGCAA GGCGTTAGCGCCCAC EcSMS35_A0134 104134 - 104742 + | HAD family hydrolase TERM 161 104751 - 104782 + F 100 -15.2 -3.52073 | gap 1, opp_overlap 104746 104755, overlap 104755 GCGCTAACAAGTCAT TCAAGCCGACGCCGC TTC GCGGCG-CGGCTTAA TTCTGGTGTTAGACA TERM 162 104755 - 104778 + F 100 -16 -3.49851 | gap 1, opp_overlap 104755 104746, overlap 104751 TAACAAGTCATTCAA GCCGACGCCGC TTC GCGGCG-CGGC TTAATTCTGGTGTTA TERM 163 104778 - 104755 - f 100 -16 -3.11619 | gap 1, opp_overlap 104751 104755, overlap 104746 TAACAAGTCATTCAA GCCGACGCCGC TTC GCGGCG-CGGC TTAATTCTGGTGTTA aadA 104788 - 105591 + | aminoglycoside adenylyltransferase TERM 164 105611 - 105634 + T 100 -16 -3.06133 | gap 1, opp_overlap 105603 105602, overlap 105628 TAACAATTCGTTCAA GCCGACCGCGC TAC GCGCGG-CGGC TTAACTCCGGCGTTA EcSMS35_A0136 106455 - 105733 - | IS26 transposase TERM 165 105999 - 106020 + g 72 -7.9 -3.98172 | gap 1, opp_overlap 105999 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 166 106154 - 106130 - G 81 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 167 106481 - 106458 - R 73 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG TERM 168 107246 - 107224 - R 83 -7.6 -4.75372 | opp_overlap 107228, overlap 107228 ACGACTGACCAAAAA TTAAGGCCGC TTA GCGGCCTTTT TCTTACTAAATGAAG TERM 169 107242 - 107228 - R 100 -12.8 -3.84901 | opp_overlap 107228, overlap 107224 CTGACCAAAAATTAA GGCCGC TTA GCGGCC TTTTTCTTACTAAAT TERM 170 107228 - 107242 + r 100 -12.8 -5.14163 | opp_overlap 107228 107224 CTGACCAAAAATTAA GGCCGC TTA GCGGCC TTTTTCTTACTAAAT EcSMS35_A0138 108165 - 107266 - | hypothetical protein EcSMS35_A0139 108445 - 108155 - | hypothetical protein TERM 171 108208 - 108221 + g 74 -3.1 -4.98061 | opp_overlap 108208 CTGCTCTGTCCAGAA TCTGT TGGC GCAGA TTTTCTTTCATGTGT vagC 108741 - 108971 + | plasmid maintenance protein VagC vagD 108968 - 109384 + | plasmid maintenance protein VagD TERM 172 109425 - 109442 + T 100 -12.7 -4.10925 | opp_overlap 109425 AAGGGCACCAAGAAA CAGCCCG TATA CGGGCTG TTTTAACAGATATCT TERM 173 109442 - 109425 - T 100 -12.7 -4.25458 | opp_overlap 109425 AAGGGCACCAAGAAA CAGCCCG TATA CGGGCTG TTTTAACAGATATCT EcSMS35_A0142 111684 - 109546 - | hypothetical protein TERM 174 111792 - 111806 + H 74 -10 -3.25823 | TTATACCATTGCTTA CACCTC TCC GAGGTG TTCATATCAGAAACA TERM 175 111961 - 111911 - H 91 -9.5 -4.70534 | gap 1, opp_overlap 111911 111912 111914, overlap 111914 111947 111950 111952 GAAATATATATAAAA TCATATCAGATATGGTTTTCATCA TTGA TGAT-AAAACAATATCTGATATTA TCAGAAATCATGAGC TERM 176 111914 - 111958 + H 83 -11.2 -3.30441 | gap 1, opp_overlap 111914 111911 111947 111950 111952, overlap 111912 111911 ATATATATAAAATCA TATCAGATATGGTTTTCATCA TTGA TGAT-AAAACAATATCTGATA TTATCAGAAATCATG TERM 177 111958 - 111914 - H 81 -11.2 -3.24884 | gap 1, opp_overlap 111912 111911 111914, overlap 111911 111947 111950 111952 ATATATATAAAATCA TATCAGATATGGTTTTCATCA TTGA TGAT-AAAACAATATCTGATA TTATCAGAAATCATG EcSMS35_A0143 112038 - 112295 + | hypothetical protein TERM 178 112401 - 112367 - g 75 -5.5 -4.72272 | gap 1, overlap 112369 GCGCTTGATGAAAAA CG-GCCGGGCCCCGTG CTGA CGCGGGACCTGGAACG GGTGCTGGAGCGAAG EcSMS35_A0144 112295 - 112885 + | hypothetical protein TERM 179 113604 - 113594 - g 100 -4 -5.73339 | overlap 113602 AGAATCAGAAAAAAA GAAT AAT ATTC AGTATGAAACCAGCA EcSMS35_A0145 113148 - 114704 + | hypothetical protein EcSMS35_A0146 114896 - 115513 + | hypothetical protein TERM 180 115711 - 115693 - T 89 -14.6 -2.80988 | opp_overlap 115693, overlap 115690 TTACAGGATCAATCA CCACCTCC CTA GGAGGTGG TTTAGGGATAACAAT TERM 181 115693 - 115711 + T 100 -14.6 -3.57263 | opp_overlap 115693 115690 TTACAGGATCAATCA CCACCTCC CTA GGAGGTGG TTTAGGGATAACAAT EcSMS35_A0147 116885 - 115806 - | putative permease TERM 182 116492 - 116476 - G 78 -9.5 -3.98804 | TCAAACCCTAAATAA TCCAGTA TAA TACTGGA AAGAACTGAAACACC TERM 183 117027 - 117042 + G 75 -6.8 -4.33153 | opp_overlap 117026 117027, overlap 117028 AAGCTCTAAAAGAAC TGGGTC ACCC GACCCG TTTGTTCATATTCAA EcSMS35_A0148 116990 - 117313 + | ArsR family transcriptional regulator EcSMS35_A0149 118569 - 117847 - | IS26 transposase TERM 184 118113 - 118134 + gF 72 -7.9 -3.98172 | gap 1, opp_overlap 118113 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 185 118268 - 118244 - Gf 81 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 186 118595 - 118572 - gH 73 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG TERM 187 118614 - 118628 + GH 85 -11.4 -3.49951 | opp_overlap 118610 TATTTGCAACAGTGC CAGCCG GGA CGGCTG TTCTATACCCATATC EcSMS35_A0150 118542 - 119474 + | Tn1721 transposase TERM 188 119721 - 119699 - g 100 -14.9 -4.7373 | GCAGGGCATGAAAAA GCCCGTAGC GGGCT GCTACGGGC GTCTGACGCGGTGGA EcSMS35_A0151 119532 - 119774 + | hypothetical protein tetR 120483 - 119806 - | tetracycline repressor protein, class A TERM 189 120831 - 120842 + G 70 -7.2 -4.11275 | overlap 120821 CGACTACGCCATCAT GGCG ACGG CGCC TTTCCTTTGGGTTCT tetA 120487 - 121761 + | tetracycline resistance protein, class A EcSMS35_A0154 122677 - 121793 - | drug/metabolite transporter TERM 190 122528 - 122483 - G 77 -11.9 -3.21099 | opp_overlap 122500 TGCGCCGAGGATGAA GATGCGCATCCACCAGATTCC CGTT GGAATCTGTCGGACGATCATC ACGAGCAATAAACCC EcSMS35_A0155 123222 - 122815 - | hypothetical protein EcSMS35_A0156 125564 - 124842 - | IS26 transposase TERM 191 125108 - 125129 + g 72 -7.9 -3.98172 | gap 1, opp_overlap 125108 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 192 125263 - 125239 - G 81 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 193 125590 - 125567 - R 73 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG EcSMS35_A0159 126901 - 126086 - | aminoglycoside 3'-phosphotransferase TERM 194 127008 - 127031 + H 73 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 195 127335 - 127359 + G 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 196 127490 - 127469 - g 72 -7.9 -3.98172 | gap 1, opp_overlap 127469 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC EcSMS35_A0160 127034 - 127756 + | IS26 transposase EcSMS35_A0163 128847 - 128635 - | IS1 transposase orfA pemK 129432 - 129067 - | stable plasmid inheritance protein PemK TERM 197 129304 - 129335 + gr 71 -9.4 -3.10894 | gap 1, opp_overlap 129304 129305 GGTCACGCGATTAAA GGCCGCCGGTG-TGA CAA TCAGCACCGGCCGCG TTCCCTGCTGCTCAT TERM 198 129335 - 129304 - GR 79 -9.4 -3.74693 | gap 1, opp_overlap 129304, overlap 129305 GGTCACGCGATTAAA GGCCGCCGGTG-TGA CAA TCAGCACCGGCCGCG TTCCCTGCTGCTCAT TERM 199 129334 - 129305 - GR 86 -12.9 -2.84602 | gap 1, opp_overlap 129304, overlap 129304 GTCACGCGATTAAAG GCCGCCGGTG-TGA CAA TCAGCACCGGCCGC GTTCCCTGCTGCTCA pemI 129658 - 129401 - | stable plasmid inheritance protein PemI TERM 200 129693 - 129676 - R 70 -5.7 -4.38712 | TTCACCTCCATAAAA GTTATAT TTAA ATATAAC ATCCACTAAAAAAAC EcSMS35_A0166 130404 - 129751 - | CAAX amino protease TERM 201 130106 - 130087 - G 72 -7.8 -3.86194 | AAGTTTCGTCATAAA TGGCTCAG CAGG CAGAGCCA GCGCCTTACCGAGCA SEQUENCE gi|170679574|ref|NC_010498.1| Escherichia coli SMS-3-5, complete genome (length 5068389) TERM 1 654 - 642 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTGG TERM 2 1330 - 1363 + G 71 -9.5 -3.42663 | gap 1, overlap 1330 1327 1357 GGATGGTTGGCATGG C-GGCGCGTGTCTTTG CAG CGATGTCACGCGCCCG TATTTCCGTGGTGCT TERM 3 2667 - 2654 - g 73 -3.7 -4.81249 | overlap 2655 GTTCAAAGTGAAAAA TGGCG AAAA CGCCC TGGCCTTCTATAGCC thrA 336 - 2798 + | aspartokinase/homoserine dehydrogenase I thrB 2800 - 3732 + | homoserine kinase TERM 4 4417 - 4453 + G 78 -12.4 -2.89793 | overlap 4414 TGCTACTACTTTGAA GCT-GTTGCGCAGCTGCC GCA GGAAGC-GCGCAACCAGC TGGTTGTCTCGGTGC thrC 3733 - 5019 + | threonine synthase TERM 5 5043 - 5069 + T 91 -8 -5.24129 | gap 1, opp_overlap 5042 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA EcSMS35_0004 5557 - 5309 - | hypothetical protein TERM 6 5468 - 5419 - G 72 -10 -3.31054 | overlap 5410 AAACAACATTATGAA TGGCGAGGCAATCGCTGGC-ACCC ACAC GGACCGCC-GCCATCGCCGCGCCA TAACAAGCACAATGA TERM 7 5556 - 5537 - G 86 -12.2 -3.45839 | opp_overlap 5537, overlap 5531 ATCGCTAAATATCAA TGCCGGAT TGCC ATCCGGCA TTTACTGCAAACTTA TERM 8 5537 - 5556 + g 91 -12.2 -3.737 | opp_overlap 5537 5531 ATCGCTAAATATCAA TGCCGGAT TGCC ATCCGGCA TTTACTGCAAACTTA EcSMS35_0005 6345 - 5569 - | hypothetical protein agcS 7845 - 6415 - | amino acid carrier protein TERM 9 7423 - 7402 - G 73 -3.7 -4.77036 | gap 1, overlap 7404 7416 GGCGATGAGCAAAAA GA-GGGCG AACAGAA CGCCCATC CAGCGCATCCCCAGC tal2 8061 - 9077 + | transaldolase TERM 10 9083 - 9114 + F 72 -9.4 -3.22102 | overlap 9081 9084 TCTGCTGTAATCATT CTTAGCGTGACCGG GAAG TCGGTCACGCTACC TCTTCTGAAGCCTGT TERM 11 9084 - 9113 + F 84 -12.9 -2.5294 | overlap 9083 9081 CTGCTGTAATCATTC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAGCCTG mog 9192 - 9779 + | molybdopterin biosynthesis protein Mog TERM 12 9802 - 9785 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC GGGC GGGGGGA TCTCAAAACAATTAG EcSMS35_0009 10380 - 9814 - | GPR1/FUN34/yaaH family membrane protein EcSMS35_0010 11242 - 10529 - | hypothetical protein TERM 13 10997 - 11029 + g 86 -12.1 -3.56325 | overlap 11000 TTTACCGTGTCCGCG CAGTTTGTTGGCGAT ACT ATCGCCACCAAAATG TTGTAATTCTCCGGC TERM 14 11000 - 11026 + g 76 -12.4 -2.60904 | overlap 10997 ACCGTGTCCGCGCAG TTTGTTGGCGAT ACT ATCGCCACCAAA ATGTTGTAATTCTCC TERM 15 11128 - 11140 + g 80 -5.5 -4.93968 | overlap 11119 TCAGTACGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT EcSMS35_0011 11671 - 11267 - | hypothetical protein dnaK 12047 - 13963 + | chaperone protein DnaK TERM 16 14027 - 13988 - f 87 -13.6 -2.91467 | gap 1, opp_overlap 13989 AAACGGGTAATTATA CTGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAT TERM 17 13989 - 14026 + F 100 -17.1 -3.25823 | gap 1, opp_overlap 13988 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 18 14133 - 14120 - g 71 -2.3 -4.98531 | GCGTGAAATCAAAAA GGCCT ACAA ACGCC TGGCCATGAAATACC dnaJ 14052 - 15182 + | chaperone protein DnaJ TERM 19 15211 - 15194 - f 100 -12.7 -4.09739 | CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CAGGGTAAAAATAGG TERM 20 15279 - 15258 - f 77 -11.5 -2.74792 | opp_overlap 15258 15259, overlap 15257 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 21 15258 - 15279 + F 100 -13.7 -3.39449 | opp_overlap 15258 15257, overlap 15259 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 22 15259 - 15278 + F 89 -15 -2.63348 | opp_overlap 15258 15257, overlap 15258 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG TERM 23 15503 - 15535 + F 73 -4.9 -4.64844 | gap 1, opp_overlap 15471 TTCTGCATATAGGGG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC EcSMS35_0014 16050 - 16811 + | hypothetical protein EcSMS35_0015 16831 - 18324 + | sulfatase TERM 24 18370 - 18404 + F 84 -7.2 -4.89521 | overlap 18373 CTTTCAGGGCCATGC CCGCCTGATTCAATGT TAC ACATTGAGTCAGGTTC TTTTCTTTGACATAT TERM 25 18373 - 18401 + F 100 -15.5 -4.54026 | overlap 18370 TCAGGGCCATGCCCG CCTGATTCAATGT TAC ACATTGAGTCAGG TTCTTTTCTTTGACA EcSMS35_0016 18454 - 19698 + | hypothetical protein TERM 26 19982 - 19995 + G 70 -6.7 -4.06611 | overlap 19979 ATTCTTTAGCAGTGA TGCCT CGGG AGGCA TTATTCTTATCATTG nhaA 19950 - 21116 + | sodium/proton antiporter nhaA TERM 27 21132 - 21151 + F 95 -10.7 -4.59414 | CAGGACGGTTTACCG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 21176 - 22081 + | transcriptional activator NhaR TERM 28 22119 - 22091 - T 79 -8 -4.41353 | overlap 22092 22093 22095 CGATAGATATTAAAA CTCACGCCCCGC TATAT ACGGGGCGTGCT AATGAACAAACGATG TERM 29 22118 - 22092 - T 81 -11.5 -3.24089 | overlap 22091 22093 22095 GATAGATATTAAAAC TCACGCCCCGC TATAT ACGGGGCGTGC TAATGAACAAACGAT TERM 30 22117 - 22093 - T 89 -15 -2.5373 | overlap 22092 22091 22095 ATAGATATTAAAACT CACGCCCCGC TATAT ACGGGGCGTG CTAATGAACAAACGA TERM 31 22115 - 22095 - T 79 -11.8 -2.79641 | overlap 22093 22092 22091 AGATATTAAAACTCA CGCCCCGC TATAT ACGGGGCG TGCTAATGAACAAAC EcSMS35_0019 24178 - 22139 - | glycosy hydrolase family protein TERM 32 23152 - 23171 + g 71 -2.1 -4.97158 | gap 1, opp_overlap 23145 TAGGCAAACCACGCT CGGTGTGG ACTAG CCA-GCCG TTTTCTTTCATCTCC TERM 33 23353 - 23337 - G 72 -7.3 -4.2528 | GGCCAATGGAAGAAA TCGATGA CAA TCACCGA GATCGGAAGATTGCG xlyP 25591 - 24218 - | xylose-proton symporter EcSMS35_0021 25804 - 25926 + | hypothetical protein TERM 34 25954 - 25969 + T 76 -6 -4.57341 | opp_overlap 25955, overlap 25955 TGCAGGCATAAAAAA ACCCGC TTGC GCGGGC TTTTTCACAAAGCTT TERM 35 25968 - 25955 - T 100 -9.5 -5.64274 | opp_overlap 25954 25955 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 36 25955 - 25968 + T 74 -9.5 -3.33922 | opp_overlap 25955, overlap 25954 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 37 25984 - 26015 + T 72 -10.3 -2.89683 | opp_overlap 25993, overlap 25988 25992 CTTTTTCACAAAGCT TCAGCAAATTGGC AATTAA GCCAGTTTGTTGA TCTGTGCAGTCAGGT rpsT 26262 - 25999 - | ribosomal protein S20 TERM 38 27482 - 27470 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 26591 - 27532 + | riboflavin biosynthesis protein RibF TERM 39 27741 - 27723 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 40 28793 - 28770 - g 81 -8.8 -4.38712 | overlap 28771 TGCACGTTGAGAAAA TGCAGCACAG CTAT CCGTGCTGCT GGCGTCACAAAACGC TERM 41 28792 - 28771 - g 81 -12.3 -3.22906 | overlap 28770 GCACGTTGAGAAAAT GCAGCACAG CTAT CCGTGCTGC TGGCGTCACAAAACG ileS 27575 - 30391 + | isoleucyl-tRNA synthetase TERM 42 30508 - 30474 - g 71 -9.2 -3.44848 | opp_overlap 30498, overlap 30472 TCTGGGCAGCAAATA CCTGATCCTCCAGAAC TTT GCTCTGGGGGATACGG TCCCGCTGTTCCCGT lspA 30391 - 30885 + | signal peptidase II TERM 43 30945 - 30890 - f 100 -23.6 -4.68451 | gap 1, overlap 30891 30892 AAAAACAATAATAAA CCCTGCCGGATGCAGCCTACAGATTGC TGC GAAATC-GTAGGCTGCATCCGGCAAAA ATCCTCAAAATATAA TERM 44 30944 - 30891 - f 100 -24.9 -3.37411 | gap 1, overlap 30890 30892 AAAACAATAATAAAC CCTGCCGGATGCAGCCTACAGATTGC TGC GAAATC-GTAGGCTGCATCCGGCAAA AATCCTCAAAATATA TERM 45 30943 - 30892 - f 100 -26.2 -2.60006 | gap 1, overlap 30891 30890 AAACAATAATAAACC CTGCCGGATGCAGCCTACAGATTGC TGC GAAATC-GTAGGCTGCATCCGGCAA AAATCCTCAAAATAT TERM 46 31050 - 31027 - g 88 -11 -4.14243 | CACTTCACGCTAAAA CTCGACGATG GCAC CACCGCCGAG TCTACCCGCAACAAT fkpB 30973 - 31422 + | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase TERM 47 31562 - 31588 + G 70 -5.9 -4.15788 | gap 1 AACCGCTACGTGGTC GATAG-CCTGCG CGAG CGTGGGGCTATC TTTATTGAGCAGATT ispH 31424 - 32374 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 48 32403 - 32422 + F 100 -9.3 -5.24129 | opp_overlap 32403, overlap 32420 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 49 32422 - 32403 - f 82 -9.3 -4.15453 | opp_overlap 32403 32420 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 50 33286 - 33271 - g 76 -9 -3.72576 | GGTTGCCTGAGTAAA CCTGCA AACG TGCAGG TGGCGCTGGATCTGG rihC 32440 - 33354 + | nonspecific ribonucleoside hydrolase RihC dapB 33521 - 34342 + | dihydrodipicolinate reductase EcSMS35_0030 34536 - 34354 - | hypothetical protein EcSMS35_0031 34621 - 34758 + | hypothetical protein TERM 51 35734 - 35706 - g 73 -3.7 -4.84761 | overlap 35707 35730 AGATGTTGAGAAAAA CGTGGTGATGATC ACC GCCCAGAACCACG GTTTTGCGGTGGATG carA 34771 - 35946 + | carbamoyl-phosphate synthase, small subunit TERM 52 38548 - 38529 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC GAAAGTGGCGGCGCG carB 35964 - 39185 + | carbamoyl-phosphate synthase, large subunit EcSMS35_0034 39411 - 39193 - | hypothetical protein TERM 53 39239 - 39258 + g 100 -10 -5.77853 | opp_overlap 39239 39237 ATCGAATAACTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTTGCCCATT caiF 39446 - 39841 + | transcriptional activatory protein CaiF TERM 54 39877 - 39858 - T 71 -10 -2.79183 | gap 1, opp_overlap 39867 GTCATTTCGATGATA CCGTGCGAC CTG GTCGC-CGG ATGCGATGCTGGCGC TERM 55 39983 - 40005 + T 72 -8.4 -3.70076 | overlap 39998 TCGGCGCAACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTCCCTCCATTTGC caiE 40550 - 39960 - | carnitine operon protein caiE caiD 41341 - 40556 - | carnitinyl-CoA dehydratase TERM 56 41423 - 41443 + r 85 -10.4 -4.27211 | overlap 41418 41424 AGCGTGATTATTAGC TGGCAGGG TAGTT CCCTGCCG TTTCATTTATTTCAG TERM 57 41424 - 41442 + r 83 -11.7 -3.15242 | overlap 41423 41418 GCGTGATTATTAGCT GGCAGGG TAGTT CCCTGCC GTTTCATTTATTTCA EcSMS35_0038 43003 - 41450 - | putative crotonobetaine/carnitine-CoA ligase TERM 58 42081 - 42062 - G 70 -10 -3.19003 | opp_overlap 42074, overlap 42051 ATAAGACGTCAGCAA GCGAACGC CGAA GCGTTCAC AAAATGCGTCTTTTT TERM 59 42907 - 42933 + g 75 -7.2 -4.38712 | ACCGGTTAACGACTC CGCCGCTGGATT CAC AAATCAGCGCCG TTTTATGACCGTAAA TERM 60 43038 - 43075 + r 75 -8.4 -3.79519 | gap 1, overlap 43039 GTTCGTTTGTTATTG GGCG-GGCGCTAGTCAG GCAAG CTGACTGACGCCACGCG TTTAGTCCTCAACTT TERM 61 43039 - 43074 + r 80 -11.9 -2.87229 | gap 1, overlap 43038 TTCGTTTGTTATTGG GCG-GGCGCTAGTCAG GCAAG CTGACTGACGCCACGC GTTTAGTCCTCAACT caiB 44294 - 43077 - | crotonobetainyl-CoA:carnitine CoA-transferase caiA 45565 - 44423 - | crotonobetainyl-CoA dehydrogenase TERM 62 44703 - 44719 + g 73 -3.6 -4.7497 | overlap 44704 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 47110 - 45596 - | L-carnitine/gamma-butyrobetaine antiporter TERM 63 47060 - 47088 + g 87 -4.5 -5.30339 | GACGATTATTAATGG CGGAAAGAAAACC TTC GGTTCTATTCCCG TTTTTCTCTTTTCAT TERM 64 47249 - 47266 + G 93 -6.3 -5.26316 | TCAATTGGCTGCATT CTGTGAT GTTA GTCACAG TTTTTTATCGGGTAA EcSMS35_0042 47226 - 47375 + | hypothetical protein TERM 65 47417 - 47453 + F 74 -9.7 -3.35695 | overlap 47411 TTTTGCTACGCCATG TTTTCAATATTGGTGAG GAG CTTAACAATATTGAAAG TTGGATTTATCTGCG TERM 66 47904 - 47881 - g 72 -6.7 -4.1552 | CACTGCCGCAACAAA CGGCGAGC-GC ACTG GCTGC-CGCCG CCCAGAAAGCAGGCT fixA 47583 - 48353 + | protein FixA fixB 48368 - 49309 + | electron transfer flavoprotein, alpha subunit fixC 49360 - 50646 + | protein FixC fixX 50643 - 50930 + | ferredoxin homolog FixX TERM 67 51446 - 51464 + G 77 -12.4 -2.83409 | overlap 51452 51461 CCGCGATGTGGTATG TCGGCGCG ACC TGCGCCGA TCTGGTCGGTTACTG EcSMS35_0047 50989 - 52320 + | major facilitator family transporter kefF 52428 - 52958 + | glutathione-regulated potassium-efflux system ancillary protein kefF TERM 68 53930 - 53920 - g 72 -6.8 -4.1552 | opp_overlap 53920 53919 53911 53923 CAGGTGCCGAATAAA CAGC GTC GCTG GTTTGCGGTGTTGTT kefC 52951 - 54813 + | glutathione-regulated potassium-efflux system protein KefC folA 54894 - 55484 + | dihydrofolate reductase TERM 69 55534 - 55560 + T 87 -13.8 -3.09015 | GTCTGATTTTACCAG TGAGCGCGATTT TGT GAGTCGCGCTCA TTGCGTAGGTCTAAA EcSMS35_0051 56250 - 55801 - | hypothetical protein TERM 70 55870 - 55860 - G 75 -5.4 -4.72272 | TTTGGTCATCAAAAA CATC GCC GATG ATGTCAGGGATTTCA EcSMS35_0052 56885 - 56286 - | hypothetical protein EcSMS35_0053 57758 - 56910 - | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apaG 58142 - 57765 - | protein ApaG TERM 71 57853 - 57874 + g 72 -8.7 -3.71527 | gap 1, overlap 57866 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 72 57944 - 57926 - G 76 -11 -3.30124 | opp_overlap 57912 57926 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 58966 - 58145 - | dimethyladenosine transferase pdxA 59952 - 58963 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 73 59818 - 59801 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG surA 61238 - 59952 - | chaperone/peptidyl-prolyl cis-trans isomerase SurA imp 63648 - 61291 - | LPS-assembly protein TERM 74 63146 - 63169 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 63136 63146, overlap 63136 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCGCCACGTTGT TERM 75 64038 - 64024 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 76 64041 - 64061 + G 74 -3.1 -5.00884 | opp_overlap 64043, overlap 64049 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT TERM 77 64513 - 64492 - g 76 -8 -4.183 | overlap 64493 GTAACTGGCAACAAA CCCAGCGT GGCCCG ACGCTGGA AGATGCCTGTAATGT djlA 63903 - 64718 + | DnaJ family protein DjlA TERM 78 64756 - 64742 - T 83 -11.4 -3.30124 | opp_overlap 64745, overlap 64745 GTGTAGGCCTGATAA GACGCG GCC CGCGTC GCATCAGGCAATCGG EcSMS35_0060 65495 - 64836 - | RluA family pseudouridine synthase TERM 79 65177 - 65153 - G 71 -10.7 -2.91695 | overlap 65150 65170 GCCAGTCGCAAATCA GCGGCAGATCT ACC AGACCTTCCGC AGGGGATGGATGCCC TERM 80 65228 - 65264 + g 72 -8.6 -3.72576 | gap 1, overlap 65230 GCTTTTTCGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC TERM 81 65455 - 65431 - G 95 -13.7 -3.29273 | opp_overlap 65453, overlap 65429 65453 TTGACCACCATAATA TGGTCATCCTG ATA CAGGATAACCA ACCAGGGTTCCTGCG rapA 68413 - 65507 - | RNA polymerase associated protein RapA TERM 82 65556 - 65568 + g 76 -9.1 -3.77219 | TCCAGACGCCAGCCT GCCTG ATC CAGGC TTTCCATTACCTGCT TERM 83 67023 - 67038 + g 70 -6 -4.18018 | overlap 67017 TAGAGCATATCGCGA GCGCGG TCTT CCGCAC TTTTGCGTGCGCCCA polB 70928 - 68577 - | DNA polymerase II TERM 84 68643 - 68632 - G 77 -5.8 -4.64676 | overlap 68633 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 85 70949 - 70969 + r 78 -8.3 -4.14598 | opp_overlap 70949 AAATCCAATAAAAAA CCAGGCT TGATTAT AGCCTGG TTTCGTTTGATTGGC TERM 86 70969 - 70949 - R 100 -8.3 -5.52096 | opp_overlap 70949 AAATCCAATAAAAAA CCAGGCT TGATTAT AGCCTGG TTTCGTTTGATTGGC araD 71698 - 71003 - | L-ribulose-5-phosphate 4-epimerase TERM 87 71781 - 71807 + r 73 -10.1 -2.99325 | opp_overlap 71771 71770, overlap 71780 AAGACGCGTCAGCGT CGCATCAGGCG GTGAA TGCCGGATGCG CTTTGCTTATCCGGC TERM 88 71843 - 71876 + r 71 -9.5 -3.08464 | opp_overlap 71853 71855, overlap 71864 AAATCGCAGCGTGTA GGCCTGATAAGACGC GTTA GCGTCGCATCAGGCG TTACATACCTGATGC TERM 89 71864 - 71894 + r 82 -12.6 -2.70932 | opp_overlap 71853 71855, overlap 71843 ATAAGACGCGTTAGC GTCGCATCAGGCGT TAC ATACCTGATGCGGC TACTTAGCGACGAAA araA 73400 - 71898 - | L-arabinose isomerase araB 75111 - 73411 - | L-ribulokinase TERM 90 74473 - 74450 - G 70 -5.3 -4.41616 | gap 2, opp_overlap 74453, overlap 74452 AGTTCGTCAAAGAAA CTGGCTGGCGG CAGG CCGCC--CCAG CTTTCATGCCATAGC TERM 91 75220 - 75206 - H 83 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGC ATAGCA AAGTGTGACGCCGTG araC 75450 - 76295 + | arabinose operon regulatory protein TERM 92 76299 - 76327 + F 100 -21.9 -3.28261 | opp_overlap 76299 76303, overlap 76303 GGATGTGAATAATAA GAAAGCAAGGGGG GGC CCCCCTTGCTTTC TTCATCTGACGTTAT TERM 93 76327 - 76299 - f 100 -21.9 -3.96068 | opp_overlap 76299 76303, overlap 76303 GGATGTGAATAATAA GAAAGCAAGGGGG GGC CCCCCTTGCTTTC TTCATCTGACGTTAT TERM 94 76323 - 76303 - f 100 -16.9 -4.57882 | opp_overlap 76299 76303, overlap 76299 GTGAATAATAAGAAA GCAAGGGGG GGC CCCCCTTGC TTTCTTCATCTGACG TERM 95 76303 - 76323 + F 100 -16.9 -4.29106 | opp_overlap 76303 76299, overlap 76299 GTGAATAATAAGAAA GCAAGGGGG GGC CCCCCTTGC TTTCTTCATCTGACG EcSMS35_0067 76809 - 77657 + | hypothetical protein EcSMS35_0068 77664 - 78086 + | hypothetical protein TERM 96 78779 - 78798 + G 76 -4.2 -4.91712 | overlap 78781 GTGAGTTTAAATGGT TGCTGCTG GCGA CGGCGGTA TTTTTGTGGGTTGGG EcSMS35_0069 78241 - 79005 + | hypothetical protein TERM 97 79022 - 79072 + T 82 -10.3 -4.10161 | AGATAGTTTGCACCG GCGC-TGGTTTGTTCCCCTCACCCC GGA GGGGCGAGGGGG-CTGTCCGTGCGC TTTTAACCCGTAATC thiQ 79773 - 79075 - | thiamine ABC transporter, ATP-binding protein thiP 81367 - 79757 - | thiamine/thiamine pyrophosphate ABC transporter, permease protein TERM 98 79847 - 79835 - G 78 -10.5 -3.48036 | TAGCAGCATAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA thiB 82326 - 81343 - | thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein TERM 99 82098 - 82108 + g 75 -4.6 -4.75174 | GCCCCAGCACCACAT CGGC TTT GCTG TTTTTGCCTTCCATC TERM 100 82190 - 82200 + g 74 -3.2 -5.00616 | TCGCAATTACAGTCG GCTT CAA AGGC TTTTTTAACCACCGG EcSMS35_0073 82784 - 83266 + | hypothetical protein TERM 101 83309 - 83291 - T 79 -6.6 -4.66833 | overlap 83292 GGTTAACCTGAAAAA GCTGACCG TTC CGGCCAGA ACAAGGCCAGACTGC TERM 102 83308 - 83292 - T 76 -10.1 -3.39618 | overlap 83291 GTTAACCTGAAAAAG CTGACCG TTC CGGCCAG AACAAGGCCAGACTG TERM 103 83356 - 83371 + T 72 -7.5 -4.11363 | opp_overlap 83354 83356 TCAGAATATGAAAGA GGGGC TGGAGT GCCCC TTCTTTAATCTTATT sgrR 85154 - 83496 - | sugar transport-related sRNA regulator SgrR TERM 104 83951 - 83963 + g 72 -4.7 -4.61633 | TCAGGGTGAGGCTTT CCAGC CCG GCGGG TTTTTCGCAATGTGT TERM 105 84625 - 84613 - G 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGATATTTGCTGCC EcSMS35_0075 85243 - 85374 + | hypothetical protein TERM 106 85419 - 85441 + T 100 -10.6 -5.93252 | GGTGCTAATCGCCAC GCCAGCAG TGATTAT CTGCTGGC TTTTTTCTTTTTGGC leuD 86087 - 85482 - | 3-isopropylmalate dehydratase, small subunit TERM 107 85918 - 85928 + g 72 -4.6 -4.72272 | ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCCAGAAA leuC 87498 - 86098 - | 3-isopropylmalate dehydratase, large subunit TERM 108 86906 - 86927 + g 74 -7.9 -4.12188 | AACTCCACCACATGC CCGGTGCCG CCTG CGCTACCGG TTTTACCGATAATCG TERM 109 87017 - 87029 + g 76 -9.1 -3.75629 | overlap 87004 87001 ATGGTCTTCGCACGA CCCTG TTT CAGGG TTTGCGTTGCCAGTA leuB 88592 - 87501 - | 3-isopropylmalate dehydrogenase leuA 90163 - 88592 - | 2-isopropylmalate synthase TERM 110 89297 - 89308 + g 72 -5.8 -4.41616 | TGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 111 90231 - 90214 - R 100 -14.1 -5.60993 | opp_overlap 90214 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG TERM 112 90214 - 90231 + r 100 -14.1 -5.65927 | opp_overlap 90214 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG EcSMS35_0080 90511 - 90380 - | hypothetical protein leuO 91001 - 91945 + | transcriptional regulator LeuO TERM 113 91951 - 91990 + T 100 -16 -5.49234 | opp_overlap 91951, overlap 91984 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TCAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 114 91990 - 91951 - T 72 -9.4 -3.1996 | opp_overlap 91951 91984 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TCAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT EcSMS35_0082 92103 - 91981 - | hypothetical protein TERM 115 92109 - 92125 + H 73 -5.1 -4.68612 | opp_overlap 92109 TTATTATCAATTTAA TCCTCTG TAA TGGAGGA TTTTATCGTTTCTTT TERM 116 92222 - 92234 + GH 86 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCGTCAAAC TERM 117 93576 - 93566 - gH 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 92173 - 93987 + | acetolactate synthase, large subunit, isozyme III ilvH 93960 - 94481 + | acetolactate synthase, small subunit, isozyme III TERM 118 94507 - 94527 + F 100 -9.7 -5.41143 | AATGCGCAATTTGCA GCCCAACAT GTC ACGTTGGGC TTTTTTTGCGAAATC TERM 119 94573 - 94563 - f 71 -4.6 -4.65747 | GAACCTGGAATAAAA GCAG TTG CCGC AGTTAATTTTCTGCG fruR 94661 - 95665 + | fructose repressor TERM 120 95711 - 95680 - f 93 -9.4 -5.06816 | gap 1, opp_overlap 95682, overlap 95666 95682 AGCCGCGAACAAAAA TACGCGCCAG-GTGA ATT TCTCTCTGGCGCGTT GAGTACGGGAATGGA TERM 121 95682 - 95709 + F 81 -12 -3.05596 | gap 1, opp_overlap 95666 95680 95682 CCGCGAACAAAAATA CGCGCCAG-GTGA ATT TCTCTCTGGCGCG TTGAGTACGGGAATG TERM 122 95709 - 95682 - f 95 -12 -4.16307 | gap 1, opp_overlap 95682, overlap 95666 95680 CCGCGAACAAAAATA CGCGCCAG-GTGA ATT TCTCTCTGGCGCG TTGAGTACGGGAATG mraZ 96267 - 96725 + | MraZ protein TERM 123 96966 - 96994 + G 76 -12.4 -2.52623 | overlap 96965 CCACGGACCTTTCTC CGCGCTGGGCGA ATACG TTGCCGAGCGCG ATCTTATCGGCAAGA mraW 96727 - 97668 + | S-adenosyl-methyltransferase MraW TERM 124 97989 - 97976 - g 76 -8.1 -4.20531 | opp_overlap 97975 97973 GATAGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 97665 - 98030 + | cell division protein FtsL TERM 125 98093 - 98113 + G 78 -7.6 -4.37734 | opp_overlap 98093 98091 98094, overlap 98094 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 126 99612 - 99633 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 99581, overlap 99615 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 127 99615 - 99630 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 99581, overlap 99612 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 128 99671 - 99689 + G 73 -11.6 -2.67171 | opp_overlap 99668 99665, overlap 99668 99670 99669 99685 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 98046 - 99812 + | peptidoglycan synthetase FtsI TERM 129 100910 - 100900 - g 81 -6.8 -4.62783 | overlap 100901 GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGCCTGCACTG murE 99799 - 101286 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 130 101723 - 101684 - g 75 -11.4 -3.07443 | opp_overlap 101692, overlap 101693 TTATACGGCAGGCAA TCTCAACAACGACATCGG CGTA CCGATGACGCTGTTGCGC TTAACGCCGGAATAC TERM 131 101714 - 101693 - g 77 -10.1 -3.6849 | opp_overlap 101692, overlap 101684 AGGCAATCTCAACAA CGACATCGG CGTA CCGATGACG CTGTTGCGCTTAACG TERM 132 102481 - 102463 - g 70 -5.2 -4.41348 | opp_overlap 102477, overlap 102467 GCGTGGGCAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 101283 - 102641 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 133 103228 - 103250 + G 74 -9.9 -3.5241 | gap 1, overlap 103226 GACTGATGGTCTTGA CGGTCTGGCA ATTA TGCC-GACCG TATTTGTCGCCGGTG mraY 102635 - 103717 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 134 103757 - 103774 + G 70 -6.2 -4.20783 | ATGTCGTCATTATCG GCCTGG GCCTCA CCGGGC TTTCTTGCGTGGACT TERM 135 103799 - 103819 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA TERM 136 104347 - 104334 - g 72 -6.7 -4.2828 | opp_overlap 104334, overlap 104318 GCGCATTTACGAAAA CGCAA AAAT TTGCG TGGTTAATGCTGATG murD 103720 - 105036 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase ftsW 105036 - 106280 + | cell division protein FtsW TERM 137 106785 - 106800 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 106277 - 107344 + | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase murC 107398 - 108873 + | UDP-N-acetylmuramate--alanine ligase ddlB 108866 - 109786 + | D-alanine--D-alanine ligase B ftsQ 109788 - 110618 + | cell division protein FtsQ ftsA 110615 - 111877 + | cell division protein FtsA ftsZ 111939 - 113090 + | cell division protein FtsZ TERM 138 114035 - 114025 - g 70 -6.8 -4.07568 | GCTGTCCTTGCAAAA CAGG AAG CCTG GGAATATGTGACCTT lpxC 113191 - 114108 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 139 114135 - 114178 + F 100 -4.5 -6.17292 | opp_overlap 114135 114147 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT secM 114264 - 114851 + | secretion monitor protein TERM 140 116029 - 116019 - g 77 -6.8 -4.50058 | overlap 116020 116022 GATCCAGAACGAAAA CCAG ACG CTGG CGTCGATCACCTTCC TERM 141 116688 - 116701 + G 75 -4.5 -4.8622 | opp_overlap 116688 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC TERM 142 117513 - 117473 - g 81 -11.1 -3.60098 | AGCGTTTAGCGCAAA TGCAGCAGCTTAGCCATCA GGA TGACGACTCTGCAGCTGCA GCTGCACTGGCGGCG secA 114913 - 117618 + | preprotein translocase, SecA subunit TERM 143 117657 - 117640 - f 100 -12.7 -4.42639 | opp_overlap 117640 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 144 117640 - 117657 + F 100 -12.7 -5.33866 | opp_overlap 117640 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 145 117905 - 117888 - g 70 -4.1 -4.62069 | overlap 117890 TCGCTATTTGAAAAA CTGGAAT ATGA ATTCCCG GACAGGCATATAACT mutT 117678 - 118076 + | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 146 118159 - 118109 - T 100 -20.7 -2.63301 | gap 1, opp_overlap 118119 GACATTTGCACACGA TGCCTGATGCGACGCT-GCCCG CGTCTTAT CAGGCCAGCGTCGCATCAGACA AAATGTCACTGCTTT EcSMS35_0105 118362 - 118165 - | zinc-binding protein YacG EcSMS35_0106 119115 - 118372 - | hypothetical protein TERM 147 118797 - 118827 + g 72 -6.8 -4.21462 | GAAATTGCCCGATAC GCGGCGCGGA AATTAATACGC TCCCCGCCGC TTTTAACTGCTGAAT coaE 119735 - 119115 - | dephospho-CoA kinase TERM 148 119439 - 119490 + g 74 -2.3 -5.0916 | gap 2, opp_overlap 119465 AGTTGCTTGCTGGAT CTGGTGTTGCGTCTCTTGCTGAATC AGCG GATGCAGCA-GGG-CGTTAAGCCAG TTTTTCTCTTCCGGG TERM 149 119708 - 119673 - G 76 -9 -3.81951 | overlap 119674 TCCGAGATCAGCAAA CGCATTGGCAACGGTA CTCT TGCCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 150 119707 - 119674 - G 78 -12.5 -2.88849 | overlap 119673 CCGAGATCAGCAAAC GCATTGGCAACGGTA CTCT TGCCACTGCCAATGC CTCCCGTTAAGGCAA guaC 119960 - 121003 + | guanosine monophosphate reductase TERM 151 121037 - 121012 - T 100 -16.2 -3.37493 | opp_overlap 121012, overlap 120997 CCTGTAATATACCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATTCCACT TERM 152 121012 - 121037 + T 100 -16.2 -3.36671 | opp_overlap 121012 120997 CCTGTAATATACCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATTCCACT pilC 122240 - 121038 - | type IV pilus assembly protein PilC TERM 153 121710 - 121696 - G 73 -4.2 -4.77165 | TCCGGTAGAACAAAA TGCAGC ATT GCCACA ACCACCATGATTGCC hofB 123615 - 122230 - | GspE family protein HofB pilA 124065 - 123625 - | type 4 pilus subunit PilA TERM 154 124018 - 124005 - G 70 -6.7 -4.08692 | CAATGGCGCTTAAAA TGGCA ATGA TGCCA ATAACCACCATCAGT nadC 125161 - 124268 - | nicotinate-nucleotide diphosphorylase (carboxylating) TERM 155 124533 - 124555 + g 82 -7.6 -4.57073 | TCGACTTCTACTGGC GCATCCGGGT GCA ACCAGGACGC TTTTTCGACCGCCTG ampD 125249 - 125800 + | N-acetylmuramoyl-L-alanine amidase ampE 125797 - 126651 + | protein AmpE TERM 156 126686 - 126658 - T 72 -10.2 -2.84325 | overlap 126655 TTGGTGTAAAGATTA TTGCCCTCACCC TGCAC GGGTGAGGGCGT AGAGAGATTAATGCG aroP 128064 - 126694 - | aromatic amino acid transport protein AroP TERM 157 129658 - 129642 - g 70 -6.5 -4.2558 | overlap 129643 TACGCCGTATGAAAA CGTCCGC GTG GCGAACA TGCAGTGGAACGAGC TERM 158 129767 - 129744 - g 81 -9.6 -4.09685 | overlap 129745 CTGGACGCCGGAAAA TCCGGAACAT GGGA ATGTTCCGGG CCATACCGGTAACGA TERM 159 129766 - 129745 - g 83 -13.1 -3.05597 | overlap 129744 TGGACGCCGGAAAAT CCGGAACAT GGGA ATGTTCCGG GCCATACCGGTAACG EcSMS35_0116 128593 - 130374 + | putative S-type colicin EcSMS35_0117 130377 - 130661 + | putative colicin immunity protein TERM 160 130716 - 130688 - f 70 -9 -3.18086 | opp_overlap 130688 130690, overlap 130690 AAACTATATATGGAA CATCATCGCATC TGGCT AATGCGATGATA TTAATGACATAAAAT TERM 161 130714 - 130690 - f 72 -9.4 -3.14393 | opp_overlap 130690 130688, overlap 130688 ACTATATATGGAACA TCATCGCATC TGGCT AATGCGATGA TATTAATGACATAAA EcSMS35_0118 130829 - 131068 + | putative colicin EcSMS35_0119 131069 - 131359 + | putative colicin immunity protein TERM 162 131386 - 131414 + F 72 -9.7 -3.16683 | opp_overlap 131379 131386 AAACTATATATGGAA CATCATCGCGT CTGGCTA ATGCGATGATG TTAATAACATAAAAT EcSMS35_0120 131526 - 131714 + | putative colicin TERM 163 131873 - 131861 - g 78 -7.7 -4.37506 | ACTAGCAAAGATAAA TCCCT AAA AGGGA AAAAATTAGAAAAAT EcSMS35_0121 131762 - 132058 + | putative colicin immunity protein EcSMS35_0123 132514 - 133278 + | GntR family transcriptional regulator EcSMS35_0122 133457 - 133275 - | hypothetical protein TERM 164 133402 - 133348 - Gf 70 -7.3 -3.90291 | gap 1, opp_overlap 133369, overlap 133349 133352 133355 AGCGCGGCAACTAAA CGTAGAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTCCA-G AAAACTCAACGTTAT TERM 165 133399 - 133352 - Gf 77 -11.4 -2.70979 | opp_overlap 133369, overlap 133348 133349 133355 CGGCAACTAAACGTA GAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 166 133658 - 133646 - gH 79 -9.1 -3.9461 | opp_overlap 133645 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG TERM 167 134984 - 134968 - gH 76 -8.7 -3.95324 | overlap 134978 GATGCTGAAGAACAA GTCGATC AAA GACCGAC TGGTGCCGATCATCG aceE 133439 - 136102 + | pyruvate dehydrogenase (acetyl-transferring), homodimeric type aceF 136117 - 138009 + | dihydrolipoyllysine-residue acetyltransferase TERM 168 138037 - 138016 - f 93 -11.5 -4.43477 | opp_overlap 138018, overlap 138018 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 169 138035 - 138018 - f 100 -14.1 -3.82321 | opp_overlap 138018, overlap 138016 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 170 138018 - 138035 + F 100 -14.1 -5.32882 | opp_overlap 138018 138016 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 171 139081 - 139053 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TGGACGACCGTGGTT lpdA 138154 - 139641 + | dihydrolipoamide dehydrogenase TERM 172 139676 - 139642 - T 77 -9.4 -3.62255 | opp_overlap 139632 GCGAAGAAGAAGTAA TTTTTCGTTTGCCGGA ACA TCCGGCAATTAAAAAA GCGGCTAGCCACGCC TERM 173 139677 - 139693 + T 100 -6.5 -5.51402 | opp_overlap 139677 CCGGCAATTAAAAAA GCGGC TAGCCAC GCCGC TTTTTTTACGTCTGT TERM 174 139693 - 139677 - T 87 -6.5 -5.26875 | opp_overlap 139677 CCGGCAATTAAAAAA GCGGC TAGCCAC GCCGC TTTTTTTACGTCTGT EcSMS35_0127 141469 - 139712 - | hypothetical protein TERM 175 139864 - 139849 - G 70 -4.7 -4.56597 | CTTTCTCCCGAAAAA CCTGA CGTTGT TCAGG TGATGCCGATTGTAT TERM 176 139910 - 139930 + g 73 -3.9 -4.8622 | overlap 139913 ATCACGTTGCTGTTG GTTCAGTGG GCG CTGCTGTAC TTTTTCCTTAAACAC TERM 177 141599 - 141587 - H 72 -7.7 -3.86346 | GGATTCGTTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 178 141942 - 141931 - g 77 -7.2 -4.57837 | overlap 141932 141933 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT acnB 141902 - 144421 + | aconitate hydratase 2 TERM 179 144482 - 144457 - f 95 -12.7 -3.66897 | gap 1, opp_overlap 144457, overlap 144449 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA TERM 180 144457 - 144482 + F 100 -12.7 -5.72622 | gap 1, opp_overlap 144457 144449 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA EcSMS35_0129 144596 - 144958 + | hypothetical protein TERM 181 144991 - 144964 - T 100 -17.1 -4.02535 | GCAGAAGTAAGTAAA TCAGGCGGAGC CTCCGT GCTCCGCCTGA GACGTTAAACAGCGG speD 145790 - 144996 - | S-adenosylmethionine decarboxylase speE 146672 - 145806 - | spermidine synthase TERM 182 146754 - 146729 - R 74 -10.5 -3.24255 | opp_overlap 146729 146731, overlap 146722 146731 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 183 146731 - 146752 + r 71 -8.7 -3.51934 | opp_overlap 146729 146722 146731, overlap 146729 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG TERM 184 146752 - 146731 - R 78 -10.9 -3.17362 | opp_overlap 146731 146729, overlap 146729 146722 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG EcSMS35_0132 147125 - 146778 - | hypothetical protein TERM 185 147245 - 147255 + H 74 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 186 148676 - 148664 - g 70 -5.5 -4.3739 | overlap 148671 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGACTCATCGCGCA cueO 147291 - 148841 + | copper oxidase CueO TERM 187 148883 - 148860 - T 83 -11 -3.57462 | opp_overlap 148862, overlap 148862 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTACTTCACAT TERM 188 148862 - 148881 + T 100 -13.6 -3.56727 | opp_overlap 148860 148862 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC TERM 189 148881 - 148862 - T 100 -13.6 -3.36515 | opp_overlap 148862, overlap 148860 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC gcd 151278 - 148888 - | quinoprotein glucose dehydrogenase hpt 151484 - 152020 + | hypoxanthine phosphoribosyltransferase TERM 190 152024 - 152057 + T 81 -3.1 -5.4182 | gap 1, overlap 152027 152028 CTGGACGAGTAAGTG TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA TTTTTATTTGTGGTT can 152723 - 152061 - | carbonic anhydrase TERM 191 153346 - 153362 + G 70 -3.5 -4.60924 | TGGATATTGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA EcSMS35_0137 152832 - 153758 + | ABC transporter, ATP-binding protein EcSMS35_0138 153755 - 154525 + | ABC transporter, permease protein TERM 192 154533 - 154561 + F 81 -9.6 -4.10657 | gap 1, overlap 154533 GTAGCTAAGGCTATT C-CCTCTCCTCTG GATT CGGGGGAGAGGAG TTTTGACGACTATCA TERM 193 154533 - 154560 + F 71 -9.8 -3.06073 | overlap 154533 GTAGCTAAGGCTATT CCCTCTCCTCTG GATT CGGGGGAGAGGA GTTTTGACGACTATC EcSMS35_0139 154630 - 155070 + | PTS system IIA component domain-containing protein EcSMS35_0140 155134 - 156363 + | polysaccharide deacetylase domain-containing protein panD 156747 - 156367 - | aspartate 1-decarboxylase TERM 194 156446 - 156430 - G 73 -9.4 -3.63744 | opp_overlap 156414 156440, overlap 156428 GTCGCCTTCAAAATA GGCGAC GTTGG GTCGCC AGGTGCGAGCTTCTT TERM 195 156780 - 156794 + H 85 -11.4 -3.56099 | opp_overlap 156780 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 196 156794 - 156780 - H 83 -11.4 -3.33696 | opp_overlap 156780 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 197 157040 - 157056 + G 88 -12.3 -3.61889 | opp_overlap 157042 ATGCACCGAGTACCA CACCGCA TGA TGCGGTG TTTAAACAATTTTTA EcSMS35_0142 157021 - 157941 + | ISNCY family transposase EcSMS35_0143 158010 - 158225 + | hypothetical protein TERM 198 158302 - 158272 - T 85 -12 -3.34344 | opp_overlap 158275, overlap 158275 TGACGTGGCAATGAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AATATTACGCCAGTT TERM 199 158299 - 158275 - T 77 -9.3 -3.81146 | opp_overlap 158275, overlap 158272 CGTGGCAATGAATAA CTGGCGCCA TCAGCCG TAGCGCCAG TTAAATATTACGCCA panC 159158 - 158307 - | pantoate--beta-alanine ligase panB 159964 - 159170 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 200 160036 - 160072 + r 95 -13 -3.30243 | opp_overlap 160031, overlap 160038 160039 160041 GGGGCAATGATTTAT CCGTATCGCACCGCCG TTGTC TGGCGGTGCGATAGTG TTATCAGGGGTAGGT TERM 201 160038 - 160070 + r 95 -14.2 -3.21924 | opp_overlap 160031, overlap 160036 160039 160041 GGCAATGATTTATCC GTATCGCACCGCCG TTGTC TGGCGGTGCGATAG TGTTATCAGGGGTAG TERM 202 160039 - 160069 + r 100 -17.7 -2.5294 | opp_overlap 160031, overlap 160038 160036 160041 GCAATGATTTATCCG TATCGCACCGCCG TTGTC TGGCGGTGCGATA GTGTTATCAGGGGTA TERM 203 160041 - 160067 + r 100 -15.9 -2.80074 | opp_overlap 160031, overlap 160039 160038 160036 AATGATTTATCCGTA TCGCACCGCCG TTGTC TGGCGGTGCGA TAGTGTTATCAGGGG EcSMS35_0146 161347 - 160076 - | putative fimbrial protein TERM 204 160480 - 160458 - G 74 -6.2 -4.50358 | opp_overlap 160459 160463, overlap 160459 AGTGAAATATCAAAA GGAACCGGTG TGG CACCGTTTCT TATTTGTGCTTCACT TERM 205 160459 - 160479 + g 85 -9.7 -4.1523 | opp_overlap 160458 160459, overlap 160463 GTGAAATATCAAAAG GAACCGGTG TGG CACCGTTTC TTATTTGTGCTTCAC TERM 206 160479 - 160459 - G 72 -9.7 -3.2913 | opp_overlap 160459 160463, overlap 160458 GTGAAATATCAAAAG GAACCGGTG TGG CACCGTTTC TTATTTGTGCTTCAC TERM 207 160463 - 160475 + g 91 -9.1 -4.63952 | opp_overlap 160459 160458, overlap 160459 AATATCAAAAGGAAC CGGTG TGG CACCG TTTCTTATTTGTGCT TERM 208 161080 - 161066 - G 73 -4.2 -4.73677 | GTTACAATAAAGAAA GCCTCC GCC AGAAGC AGTATCTAACTGACT TERM 209 161332 - 161346 + g 72 -7.2 -4.18197 | opp_overlap 161331 AAAAAAGAAAATATC TGAAGA ATG TCTTCA TTTTCACTCCACCAT EcSMS35_0147 161997 - 161401 - | putative fimbrial protein TERM 210 161937 - 161900 - G 100 -17.1 -2.90901 | ATATTGGCAACCATA TCCACATCCAGCCCTGC ATAT ACAGGACTGGATGTGGC AAACAATAATGCCAG EcSMS35_0148 162629 - 162024 - | hypothetical protein TERM 211 162067 - 162082 + g 85 -6.8 -4.83677 | opp_overlap 162047 162067, overlap 162047 GGTGCGGAAAACGGA CCGGCA GTGA TGTCGG TTTTGCTTTTATTTT TERM 212 162391 - 162403 + g 93 -3.5 -5.46706 | TCCTTAAACTGTAAC TTAAA TAT TTTAA TTTTTGTTTTGGCAT EcSMS35_0149 163210 - 162644 - | fimbrial protein TERM 213 163051 - 163073 + g 72 -9.9 -3.34043 | AAGTTAATGTGTAGG TGTCACTCC CATCA GGGGTGACA TTGTCGCCTGATAAC htrE 165830 - 163230 - | outer membrane usher protein HtrE TERM 214 164322 - 164343 + g 73 -3.7 -4.74103 | overlap 164320 164324 CGTAACCTGATTTTT CATGCGTGA ATAG TTACGCATA TTTTTAGGTTCCAGG EcSMS35_0151 166605 - 165865 - | periplasmic pilus chaperone family protein TERM 215 166670 - 166636 - R 79 -9.4 -3.82321 | overlap 166634 GAGTTAATTAAAATA GGGAGTAACATTCC ACTATTA AGAAAGTTACTCCC ATAGATATTCAGTTT EcSMS35_0152 167287 - 166703 - | fimbrial protein TERM 216 167497 - 167463 - R 95 -11.9 -4.15788 | opp_overlap 167468, overlap 167468 AAGCTTTTGAACAAA TTAAATTTACTTAAT TCAAG ATTAAGTAAATTTAA GTTCACAAGTGCAAT TERM 217 167492 - 167468 - R 74 -7.4 -4.21141 | opp_overlap 167468, overlap 167463 TTTGAACAAATTAAA TTTACTTAAT TCAAG ATTAAGTAAA TTTAAGTTCACAAGT TERM 218 167468 - 167492 + r 71 -8.1 -3.75332 | opp_overlap 167468 167463 TTTGAACAAATTAAA TTTACTTAATT CAA GATTAAGTAAA TTTAAGTTCACAAGT TERM 219 167655 - 167633 - R 79 -8 -4.38712 | opp_overlap 167635 GTGATTTTCAGAAAA TATTTATATT CGT AATATAAATA AATTACCATTTGCTT folK 168137 - 167658 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase pcnB 169498 - 168134 - | poly(A) polymerase gluQ 170517 - 169591 - | glutamyl-Q tRNA(Asp) synthetase TERM 220 169879 - 169869 - G 81 -6.8 -4.65895 | CTTTCCAGCCAAAAA GCTG GTA CAGC GAGATTTGTCGCACT TERM 221 170528 - 170504 - G 91 -5.6 -5.4505 | opp_overlap 170507, overlap 170507 TCTTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 222 170525 - 170507 - G 100 -11.7 -4.81306 | opp_overlap 170507, overlap 170504 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT TERM 223 170507 - 170525 + g 77 -12.4 -2.79302 | opp_overlap 170507 170504 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT dksA 171009 - 170554 - | RNA polymerase-binding protein DksA sfsA 171891 - 171187 - | sugar fermentation stimulation protein TERM 224 171534 - 171555 + g 77 -7.3 -4.48175 | gap 1, opp_overlap 171534 171529, overlap 171548 GCAACATAAAGTCAA TACGGCTGCG TTC TGC-GCCGTA TTTTACTTCGCTTTT TERM 225 171849 - 171839 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC ligT 172436 - 171906 - | 2'-5' RNA ligase TERM 226 172155 - 172143 - G 74 -10.5 -3.15544 | CGCCAGCTGGATTAA GCCGC GTG GCGGC TGTCGCATCCCTAAC TERM 227 172274 - 172253 - G 70 -7.3 -4.07568 | opp_overlap 172253 TCCGTCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC TGCGCTCACTTCGCC hrpB 172465 - 174939 + | ATP-dependent helicase HrpB TERM 228 175336 - 175348 + G 78 -9.1 -3.86346 | GGCAAGGTCTGGCAA CTGCC CGC GGCAG TTTATGGCCGGATGG TERM 229 176403 - 176389 - g 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAA mrcB 175033 - 177567 + | penicillin-binding protein 1B TERM 230 177607 - 177585 - T 89 -14.9 -2.89742 | TCTAAGCGTGACATA CCGGATGGC GAGTA GCCATCCGG TAAAATAACATCCCA EcSMS35_0161 177766 - 177632 - | hypothetical protein TERM 231 177692 - 177711 + g 73 -9.2 -3.68662 | GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT fhuA 177787 - 180045 + | ferrichrome-iron receptor FhuA TERM 232 180056 - 180077 + F 87 -11.5 -3.5774 | overlap 180057 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCG TTTCACAAGTTGGCT TERM 233 180057 - 180076 + F 89 -15 -2.74322 | overlap 180056 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC GTTTCACAAGTTGGC fhuC 180096 - 180893 + | ferrichrome transport ATP-binding protein FhuC TERM 234 180916 - 180944 + G 88 -11 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGTCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 180893 - 181783 + | ferrichrome-binding periplasmic protein FhuD TERM 235 181922 - 181936 + G 72 -4.3 -4.66163 | CGCCGGATATTGACG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 181780 - 183762 + | ferrichrome ABC transporter, permease protein FhuB TERM 236 183790 - 183768 - T 100 -19.2 -3.66288 | opp_overlap 183765, overlap 183750 GAGCCGTTAATAGAA TGCCTCGCCC GGT GGGCGAGGCA AAATCATTACAACTT hemL 185077 - 183797 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 237 183946 - 183936 - G 72 -6.8 -4.23615 | overlap 183932 ATCATATGGAAGAAA CGCT TAA AGCG TTCCACGTCACAGGC TERM 238 185354 - 185330 - g 88 -11.4 -3.85698 | overlap 185333 CTCCCTCTTTAGAAA CACCGCAGGC CGCGC GCCTGCGACG CAGACAACTGATTCG TERM 239 185351 - 185333 - g 73 -11.7 -2.70946 | overlap 185330 CCTCTTTAGAAACAC CGCAGGC CGCGC GCCTGCG ACGCAGACAACTGAT TERM 240 185877 - 185888 + G 72 -7.2 -4.18024 | GGCGGCCTTTAACGC CCCG CTAG CGGG TATTTTGTTTATTAT clcA 185302 - 186723 + | H(+)/Cl(-) exchange transporter ClcA TERM 241 187011 - 186997 - g 75 -5.6 -4.68994 | opp_overlap 186997 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 186805 - 187149 + | iron-sulfur cluster assembly accessory protein YadR TERM 242 187159 - 187187 + T 100 -14.7 -3.68024 | overlap 187161 ATCTAATCTGCTGTT CATGTGCCGGATA AAC TATCCGGCACATC TTCTCTCTTCAACGA TERM 243 187161 - 187185 + T 100 -17.3 -3.41962 | overlap 187159 CTAATCTGCTGTTCA TGTGCCGGATA AAC TATCCGGCACA TCTTCTCTCTTCAAC EcSMS35_0169 187819 - 187196 - | hypothetical protein btuF 188657 - 187857 - | cobalamin ABC transporter, periplasmic cobalamin-binding protein TERM 244 188036 - 188024 - G 71 -9.1 -3.50853 | CGCCTGTAATGACAA TCGCC TGT GGCGA GCGTGCTAACACCTG TERM 245 188640 - 188622 - G 88 -11.7 -3.79419 | overlap 188620 CGGCGCGAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGACTTAGCC mtnN 189348 - 188650 - | MTA/SAH nucleosidase dgt 189432 - 190949 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 246 191410 - 191430 + G 70 -11.1 -2.78216 | opp_overlap 191407 191410, overlap 191407 AGCAACAGAAATTCA TGGCGCTGG GTT CCGGCGTCA TCATTGATGCCGATA degP 191079 - 192503 + | protease Do TERM 247 192514 - 192537 + F 100 -14.6 -3.52093 | AGTAATCTCCCTCAA CCCCTTCCTG AAAA CGGGAAGGGG TTCTCCTTACAATCT cdaR 192658 - 193815 + | carbohydrate diacid regulator TERM 248 193855 - 193834 - T 74 -10.1 -3.15658 | overlap 193832 193830 GATGACAAAATTACA GCCGGGTGA GACT TTACCCGGC CCACAGAATGACATT EcSMS35_0175 194255 - 193869 - | hypothetical protein TERM 249 194127 - 194141 + g 75 -7.1 -4.40003 | AAACTTCACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA TERM 250 194563 - 194533 - R 80 -8.9 -4.05714 | opp_overlap 194532 194529, overlap 194537 194538 ATTCTGAACCAGAAA GCAATCGGGCAGC GTCGT GCTGCCCGTGTAC ATACTTTTAGTCGAT TERM 251 194559 - 194537 - R 78 -10.5 -3.65415 | opp_overlap 194532 194529, overlap 194533 194538 TGAACCAGAAAGCAA TCGGGCAGC GTCGT GCTGCCCGT GTACATACTTTTAGT TERM 252 194558 - 194538 - R 86 -14 -2.78526 | opp_overlap 194532 194529, overlap 194537 194533 GAACCAGAAAGCAAT CGGGCAGC GTCGT GCTGCCCG TGTACATACTTTTAG dapD 195394 - 194570 - | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 253 194911 - 194930 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATACCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC glnD 198097 - 195425 - | protein-P-II uridylyltransferase TERM 254 198133 - 198156 + r 79 -6.6 -4.73613 | opp_overlap 198137, overlap 198137 AAATTATTGCATTAA AAAAGCCGGC ATTC GCCGGCTTCA TTTTATTCGTCGTGC TERM 255 198137 - 198152 + r 93 -11.8 -3.83868 | opp_overlap 198137, overlap 198133 TATTGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC TERM 256 198152 - 198137 - R 100 -11.8 -5.15634 | opp_overlap 198137 198133 TATTGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC map 198953 - 198159 - | methionine aminopeptidase, type I TERM 257 198903 - 198913 + g 74 -2.4 -5.15381 | overlap 198892 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 258 199731 - 199720 - g 72 -7.2 -4.24413 | overlap 199717 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 199321 - 200046 + | ribosomal protein S2 EcSMS35_0179 200162 - 199998 - | hypothetical protein TERM 259 200039 - 200027 - G 76 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCAC TERM 260 200098 - 200118 + g 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 261 200353 - 200337 - g 77 -3 -5.13521 | gap 1, overlap 200338 200341 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 200181 - 201032 + | translation elongation factor Ts TERM 262 201043 - 201064 + F 100 -13.7 -4.84761 | opp_overlap 201043 201046 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 263 201064 - 201043 - f 93 -11.5 -4.23892 | opp_overlap 201043, overlap 201046 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 264 201061 - 201046 - f 81 -11.8 -3.12324 | opp_overlap 201043, overlap 201043 AATTATCGAAAAGGA GCCGCC TGAG GGCGGC TTCTTTTTGTGCCCA pyrH 201179 - 201904 + | UMP kinase TERM 265 201922 - 201966 + F 77 -11.5 -2.57501 | opp_overlap 201925, overlap 201921 201919 201918 201924 CCCGTGATGGATAAA TAAGGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCCGTA ATATGTTTAATCAGG TERM 266 201963 - 201925 - f 86 -11 -4.09117 | opp_overlap 201924 201922 201921 201919 201918 GTGATGGATAAATAA GGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCC GTAATATGTTTAATC frr 202054 - 202611 + | ribosome releasing factor TERM 267 202611 - 202591 - f 78 -8.3 -4.14627 | opp_overlap 202591 202592 202594, overlap 202592 202594 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 268 202591 - 202611 + F 78 -8.3 -4.15044 | opp_overlap 202591 202592 202594, overlap 202592 202594 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 269 202610 - 202592 - f 81 -11.8 -3.08294 | opp_overlap 202591 202592 202594, overlap 202591 202594 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 270 202592 - 202610 + F 81 -11.8 -3.08812 | opp_overlap 202592 202591 202594, overlap 202591 202594 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 271 202624 - 202672 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 202630, overlap 202625 202630 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 272 202625 - 202671 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 202630, overlap 202624 202630 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 273 202666 - 202630 - f 100 -13 -4.98255 | gap 1, opp_overlap 202625 202624 202630 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 274 202630 - 202666 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 202630, overlap 202625 202624 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC dxr 202703 - 203899 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 275 204004 - 204021 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG uppS 204085 - 204846 + | di-trans,poly-cis-decaprenylcistransferase cdsA1 204859 - 205716 + | phosphatidate cytidylyltransferase rseP 205728 - 207080 + | RIP metalloprotease RseP TERM 276 207619 - 207608 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 277 208315 - 208347 + G 71 -10.5 -2.8547 | opp_overlap 208319, overlap 208319 TGTCGATACCGATAC CCAACGTGTTCCGGG TAG CCCGGATCAGGTTGA TGTAGTCTACAAGGT TERM 278 208319 - 208343 + G 72 -9.9 -3.31269 | opp_overlap 208319, overlap 208315 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGATCAGG TTGATGTAGTCTACA TERM 279 208343 - 208319 - g 70 -9.9 -3.14026 | opp_overlap 208319 208315 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGATCAGG TTGATGTAGTCTACA yaeT 207110 - 209542 + | outer membrane protein assembly complex, YaeT protein TERM 280 209641 - 209624 - f 72 -7.7 -3.96216 | overlap 209625 GGGCCACGCAAAGAA CTGCACC TTCC GGTGCAA ATGGGATGGTAAGGA TERM 281 209897 - 209873 - g 77 -3.4 -5.10154 | AGCTAAAATGAAAAA GCTGCAGTCC ATGAA AGCCGGCAGC GATCGCACTAAGCTG TERM 282 210126 - 210098 - g 95 -14 -3.28712 | overlap 210084 210083 210116 CGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCTG ACGTACTGAAACAGG skp 209664 - 210149 + | chaperone protein Skp TERM 283 210231 - 210206 - g 82 -13.3 -2.97245 | opp_overlap 210204, overlap 210201 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 210153 - 211178 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 284 211205 - 211242 + F 100 -12.7 -4.07515 | overlap 211207 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 285 211207 - 211240 + F 100 -13.1 -3.60967 | overlap 211205 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 211283 - 211738 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 286 212115 - 212101 - g 70 -10 -3.22298 | opp_overlap 212097 CTTACTGATGATCAA TGCGCA CAT TGCGCA CGATTGTACGGTAGG lpxA 211742 - 212530 + | acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase TERM 287 212564 - 212585 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG TERM 288 212969 - 212985 + G 75 -7.3 -4.37886 | overlap 212970 TGGTGCTCGCATTTC TGCCTTT CGA AAAGGCG TTTTATGACAAATAC lpxB 212530 - 213678 + | lipid-A-disaccharide synthase TERM 289 213842 - 213831 - g 81 -7.2 -4.67011 | opp_overlap 213830 AAGCTGAGCGAAAAA CGCC GTCT GGCG CTCTGTGAAGAGATC rnhB 213675 - 214271 + | ribonuclease HII dnaE 214308 - 217790 + | DNA polymerase III, alpha subunit TERM 290 217956 - 217942 - g 74 -2.8 -5.00616 | GTCTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 217803 - 218762 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 291 218783 - 218800 + F 100 -9.1 -5.24129 | opp_overlap 218783 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 292 218800 - 218783 - f 79 -6.9 -4.61527 | opp_overlap 218783 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 293 219668 - 219650 - g 70 -6.7 -4.07568 | opp_overlap 219663 CCGGTCTGGCTAAAA CCAACAC GTAAT GCGTTGG GGATTCTTGGTGGGA TERM 294 219857 - 219873 + G 76 -8 -4.27617 | CACTTCGATTCTGCC TGGGTG CCGTA CACCCA TTTTCATCCGATCTA ldcC1 218861 - 221002 + | lysine decarboxylase, constitutive EcSMS35_0198 221059 - 221448 + | glyoxylase family protein TERM 295 221468 - 221488 + F 91 -13.3 -3.24925 | TGTCATCGCCATATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT tilS 221513 - 222811 + | tRNA(Ile)-lysidine synthase TERM 296 222850 - 222818 - T 93 -12 -3.76952 | overlap 222838 CTTAGTTAAGTGAAA GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC GAAAGTCAATCAGGA rof 223114 - 222860 - | Rof protein EcSMS35_0201 223307 - 223107 - | hypothetical protein TERM 297 223144 - 223157 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 298 223768 - 223755 - g 76 -8.1 -4.258 | opp_overlap 223764 CGACGGATTAAGAAA GCCTG CACT CAGGC CGCAGAAGTGGCGCT EcSMS35_0202 223473 - 224018 + | hypothetical protein EcSMS35_0203 224015 - 224437 + | peptidyl-tRNA hydrolase domain-containing protein cutF 224451 - 225161 + | copper homeostasis protein CutF EcSMS35_0205 226141 - 225317 - | putative lipoprotein TERM 299 226184 - 226164 - R 100 -11.1 -5.10497 | opp_overlap 226164 AATCCATGTAAAAAA GGGCCCCGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 227912 - 226194 - | prolyl-tRNA synthetase TERM 300 227960 - 227942 - R 80 -11 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA EcSMS35_0207 228730 - 228023 - | hypothetical protein TERM 301 228577 - 228602 + g 83 -12.6 -3.28924 | gap 1 AATGGCTGAACGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGGAGCAATG TERM 302 228627 - 228639 + g 70 -4.7 -4.57073 | overlap 228628 GCAATGAGATGCAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 229080 - 228727 - | exopolysaccharide synthesis regulator RcsF TERM 303 228995 - 229005 + g 74 -8.2 -3.92659 | overlap 228988 228999 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 304 229216 - 229188 - R 76 -6 -4.56775 | gap 1, opp_overlap 229189, overlap 229191 229194 AGGCGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 305 229214 - 229191 - R 95 -14.6 -3.23708 | opp_overlap 229189, overlap 229188 229194 CGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 306 229211 - 229194 - R 100 -12.7 -3.75505 | opp_overlap 229189, overlap 229191 229188 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 230064 - 229249 - | D-methionine ABC transporter, periplasmic D-methionine-binding lipoprotein metI 230757 - 230104 - | D-methionine ABC transporter, permease protein TERM 307 230697 - 230686 - G 79 -2.2 -5.24449 | CACAAACCCAAAAAA TCCG GATA CGAA GGTCATTGCCAGCGT metN 231781 - 230750 - | D-methionine ABC transporter, ATP-binding protein TERM 308 231071 - 231081 + g 77 -8.2 -4.13767 | overlap 231079 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA TERM 309 231416 - 231427 + g 70 -5.8 -4.15249 | opp_overlap 231404 CAATGACAGCAATTC CGTC ACGC GACG TTTGATTTCGTCTTT EcSMS35_0212 231969 - 232541 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 310 232694 - 232680 - f 76 -4.2 -5.0916 | opp_overlap 232680, overlap 232681 232688 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 311 232726 - 232714 - f 72 -7.7 -4.00532 | overlap 232724 CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCACGACAGTG TERM 312 234773 - 234736 - f 100 -6.3 -5.68438 | opp_overlap 234738 234753, overlap 234738 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 313 234738 - 234771 + F 77 -6.7 -4.49756 | opp_overlap 234736 234738, overlap 234753 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 314 234771 - 234738 - f 88 -8.9 -4.47052 | opp_overlap 234738 234753, overlap 234736 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 315 235381 - 235369 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 316 236682 - 236671 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 317 237869 - 237848 - f 76 -8.7 -3.91196 | opp_overlap 237865 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TGAAACAGAATTTGC TERM 318 238143 - 238162 + F 100 -10 -5.92337 | opp_overlap 238142 238143 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGAGG TTTTTTTTCGTCTAT TERM 319 239057 - 239028 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 238293 - 239096 + | 2,5-didehydrogluconate reductase B TERM 320 239107 - 239124 + T 100 -11.3 -4.68593 | ATTAAGCCTCTCTGA CAGCTCC TCCG GGAGCTG TTTTTACATGCTCGC EcSMS35_0221 240007 - 239093 - | LysR family transcriptional regulator TERM 321 240314 - 240290 - g 72 -9.9 -3.28924 | opp_overlap 240289 240285 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 322 240913 - 240936 + G 82 -3.1 -5.18371 | overlap 240907 240908 240913 240911 CGATGATCAGCGCCG TCGGGCG TTTGGTCGCC CGCTCGA TTTTGTTTTCTACCG EcSMS35_0223 240248 - 241048 + | endonuclease/exonuclease/phosphatase family protein TERM 323 241069 - 241094 + F 89 -8.3 -4.72272 | gap 1, opp_overlap 241053, overlap 241054 241053 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGCCC TTTTTAATCAAACAA EcSMS35_0224 241122 - 241892 + | UbiE/COQ5 family methlytransferase TERM 324 241891 - 241931 + T 89 -15 -3.05997 | opp_overlap 241901, overlap 241901 CACATAAAGCGGCAT AAATAAAAAAGGCACCGG GGGAA TCGGTGCCTTTTTTATTA TCTGGTTTGTCAGGA TERM 325 241921 - 241901 - T 100 -9.7 -5.72622 | opp_overlap 241891 241901 GGCATAAATAAAAAA GGCACCG GGGGAAT CGGTGCC TTTTTTATTATCTGG TERM 326 241901 - 241921 + T 100 -10.4 -5.60689 | opp_overlap 241901, overlap 241891 GGCATAAATAAAAAA GGCACCGG GGGAA TCGGTGCC TTTTTTATTATCTGG mltD 243161 - 241941 - | membrane-bound lytic murein transglycosylase D TERM 327 242640 - 242677 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 242649, overlap 242649 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 328 242649 - 242669 + g 70 -4.6 -4.46669 | opp_overlap 242649, overlap 242640 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 244126 - 243371 - | hydroxyacylglutathione hydrolase TERM 329 243752 - 243740 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT EcSMS35_0228 244160 - 244882 + | putative methyltransferase rnhA 245346 - 244879 - | ribonuclease H TERM 330 245693 - 245740 + G 70 -4.9 -4.4959 | ATCCGCGGCGCGGAG CTCGTGATCCATAACGCAG CGTTCGATAT CGGCTTTATGGACTACGAG TTTTCGTTGCTTAAG dnaQ 245402 - 246142 + | DNA polymerase III, epsilon subunit TERM 331 246358 - 246391 + T 100 -16.9 -2.9732 | opp_overlap 246363, overlap 246363 GTTCCGCCAATATTC AGAAAGCCCGAATCA TTAC TGATTCGGGCTTTCG TCGTTTAAGTTCCAG TERM 332 246363 - 246386 + T 100 -15.4 -3.89412 | opp_overlap 246363, overlap 246358 GCCAATATTCAGAAA GCCCGAATCA TTAC TGATTCGGGC TTTCGTCGTTTAAGT TERM 333 246386 - 246363 - T 100 -15.4 -3.9777 | opp_overlap 246363 246358 GCCAATATTCAGAAA GCCCGAATCA TTAC TGATTCGGGC TTTCGTCGTTTAAGT TERM 334 246439 - 246414 - T 82 -6.9 -4.9725 | overlap 246416 AGTTCCAGAGAAAAA TAGCCACGAAA CTTA TCTCGTAGCCA TATTCACCCTCTAAC TERM 335 246437 - 246416 - T 72 -7.3 -4.11141 | overlap 246414 TTCCAGAGAAAAATA GCCACGAAA CTTA TCTCGTAGC CATATTCACCCTCTA EcSMS35_0231 247220 - 246450 - | carbon-nitrogen family hydrolase TERM 336 246933 - 246913 - G 74 -3.1 -4.91109 | overlap 246917 CGCTTATCATAAAAA TGTACCGTG CCG CCCGGCTCA ACCAGCAAAAAGCGG EcSMS35_0232 247398 - 247847 + | inhibitor of vertebrate lysozyme TERM 337 247864 - 247881 + T 100 -12.7 -3.73068 | opp_overlap 247864 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG TERM 338 247881 - 247864 - T 100 -12.7 -4.56367 | opp_overlap 247864 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG fadE 250334 - 247890 - | acyl-coenzyme A dehydrogenase TERM 339 249583 - 249563 - G 77 -9.7 -3.64822 | overlap 249566 ACTCGCCCATGCAAA CAATCCCGG TAT CCGGAATCG CGCCCGCATCGGAAC TERM 340 249580 - 249566 - G 72 -7.8 -3.96216 | overlap 249563 CGCCCATGCAAACAA TCCCGG TAT CCGGAA TCGCGCCCGCATCGG TERM 341 249983 - 250002 + g 70 -4.2 -4.62069 | overlap 249967 CAGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 342 250811 - 250792 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 250786, overlap 250793 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCCATTTCTGACG gmhA 250574 - 251152 + | phosphoheptose isomerase TERM 343 251995 - 251974 - g 74 -8.7 -3.91084 | opp_overlap 251989 TGACGGGCAATGAAA CCTGGCAAA AGAT TATGCCAGG TGAATGGCGCTTATT EcSMS35_0236 251268 - 252035 + | glutamine amidotransferase, class II EcSMS35_0235 252746 - 252006 - | hypothetical protein dinJ 253442 - 253182 - | addiction module antitoxin component DinJ TERM 344 253241 - 253251 + g 86 -6.8 -4.93547 | TATGAATACCAACGC CAGC TTC GCTG TTTTTGATTGATTGA TERM 345 253877 - 253867 - g 77 -8.2 -4.13654 | overlap 253860 253868 TGCCGAAAGCAGAAA GGCG CTG CGCC AGCACAACCGCGAAC EcSMS35_0239 253652 - 254401 + | NlpC/P60 family protein EcSMS35_0240 254577 - 255074 + | hypothetical protein TERM 346 255132 - 255163 + T 70 -10 -2.57564 | opp_overlap 255142, overlap 255131 CGTGCCTGAACGGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCG GTTGTGCGCAGATGC lfhA 257279 - 255186 - | lateral flagellar export/assembly protein LfhA lfhB 258402 - 257263 - | lateral flagellar export/assembly protein LfhB lfiR 259174 - 258392 - | lateral flagellar export/assembly protein LfiR lfiQ 259448 - 259176 - | lateral flagellar export/assembly protein LfiQ lfiP 260203 - 259451 - | lateral flagellar export/assembly protein LfiP lfiN 260571 - 260200 - | lateral flagellar export/assembly protein LfiN lfiM 261415 - 260564 - | lateral flagellar export/assembly protein LfiM TERM 347 262244 - 262234 - g 90 -6.8 -5.1356 | opp_overlap 262243 CTGCACCAATAAAAA CCTG GAG CAGG AAGTTGCCGCCGGAC lafK 261788 - 262774 + | lateral flagellar RpoN-interacting regulatory protein LafK lfiE 262789 - 263130 + | lateral flagellar basal body component protein LfiE TERM 348 263232 - 263252 + G 80 -11.9 -3.41051 | TGGCGGGAGTGGGGC TTGCCGTTG CGG CGACGGCAA TTATCGTCAGCGTAC TERM 349 264010 - 263998 - g 70 -10.5 -2.78266 | overlap 263995 AACTCAGGAACACTA CGGCG ACG CGCCG AAAATCAACCGCGAA lfiF 263135 - 264781 + | lateral flagellar M-ring protein LfiF lfiG 264759 - 265769 + | lateral flagellar C-ring switch protein LfiG TERM 350 265787 - 265812 + G 74 -8.1 -4.07568 | opp_overlap 265787 265785 ATGACCATTGAAACA CTGCGCGGGCG CTAT CGCCTGCACCG TTTTCCGCCGCGCCA lfiH 265772 - 266482 + | lateral flagellar export/assembly protein LfiH TERM 351 266587 - 266610 + G 78 -12.4 -2.89564 | TGCTGGAGAGCGTCG GCTGCCCGCT AATG ACCGGGCAGC TGTGTCGCATCGAAA lfiI 266475 - 267812 + | lateral flagellar export/assembly protein LfiI TERM 352 268086 - 268062 - g 84 -3.6 -5.19212 | gap 1 AGGAGCAGGAAAAAA CGC-TGGCT AACATCAA AGCCACGCG AATGCAGAAAAACCT TERM 353 268212 - 268196 - g 70 -3.6 -4.70879 | GCGAAAGCGCAAAAA GCGGTG GATGA CATCGC CGTCCAGTGCTGGCT lfiJ 267815 - 268249 + | lateral flagellar export/assembly protein LfiJ EcSMS35_0255 268252 - 268647 + | cytidyltransferase-like protein EcSMS35_0256 268964 - 268659 - | hypothetical protein TERM 354 268765 - 268778 + g 100 -3.9 -5.77571 | TTGTTTGTTGATATC TCTAT TTCG ATAGA TTTTTCTTTTTTCAT EcSMS35_0257 270012 - 269191 - | hypothetical protein TERM 355 270295 - 270335 + r 74 -7.6 -4.15565 | gap 2, opp_overlap 270311 AATACATTGCAAGGT CGCGT-AG-GCCTGATAAGC GAA GCGCATCAGGCACTTGCGCG TTTTACCCTAGTGCC EcSMS35_0258 272782 - 270338 - | glycosyl transferase, group 2 family protein TERM 356 271054 - 271065 + g 74 -5.8 -4.46112 | AACGGTTCCAGTCGG CGTG GTTC CACG TTTCTTTGGCTAAGC TERM 357 271375 - 271361 - G 100 -10 -5.24129 | GGTTTCCATAAAAAA GCCGAT GGT ATCGGC GATAGGTAATGTAGA TERM 358 272511 - 272524 + g 72 -4.5 -4.60487 | overlap 272512 AGCATATTGCGTTTT TTGCC CAGC GGCAG TTTTTCCGGGTGATG lafV 273890 - 272961 - | lateral flagellar associated protein LafV TERM 359 273016 - 273039 + g 78 -8.8 -4.26188 | gap 1, overlap 273017 GCACATAACGACTGG AGCTGCTGGCG AAT CGCC-GCAGCA TTTTCACTCTCTCGC TERM 360 273017 - 273038 + g 81 -12.3 -3.15231 | gap 1, overlap 273016 CACATAACGACTGGA GCTGCTGGCG AAT CGCC-GCAGC ATTTTCACTCTCTCG lfgN 274446 - 274018 - | lateral flagellar chaperone protein LfgN lfgM 274737 - 274459 - | lateral flagellar anti-sigma factor 28 protein LfgM lfgA 275554 - 274817 - | lateral flagellar P-ring addition protein LfgA lfgB 275636 - 275971 + | lateral flagellar rod protein LfgB lfgC 275974 - 276405 + | lateral flagellar basal-body rod protein LfgC TERM 361 276864 - 276886 + G 72 -7.6 -3.92869 | CCGGAAGGGAGTTCG TCCGTCGGGC CAG GCCAGGTGGA TTTCTCGGTGAATCC lfgD 276405 - 277118 + | lateral flagellar rod protein LfgD TERM 362 277389 - 277414 + G 90 -9.7 -4.30719 | CGACGACGGTTTTTT TGTTACCTGCG ACAG CGCGGGCAACA TTTCTTATACCCGCG lfgE 277141 - 278343 + | lateral flagellar hook protein LfgE lfgF 278343 - 279080 + | lateral flagellar rod protein LfgF TERM 363 279409 - 279397 - g 78 -7.7 -4.42386 | TCGGTACCCAGAAAA CCTTC ACC GAAGG CAACGTTGAGACCAC TERM 364 279754 - 279742 - g 73 -9.1 -3.57263 | ACCTGTATCTGGAAA CCGCT GCC AGCGG TCAGCCGACCGAAGG lfgG 279159 - 279944 + | lateral flagellar rod protein LfgG TERM 365 280127 - 280105 - g 80 -5.5 -5.00884 | overlap 280108 ATTCTGGTCAAAAAA GACGACGCA TACTT TGCGCCACC AACCACCGAAGCGCC TERM 366 280141 - 280173 + G 78 -10.6 -3.53444 | gap 1, opp_overlap 280133 280130 280138, overlap 280142 CCAACCACCGAAGCG C-CGCCTCCGGCA GACGGGCG TGCCGGGGGCGTG TTTGAAACCGGCTAC TERM 367 280142 - 280171 + G 95 -14.3 -3.34517 | opp_overlap 280133 280130 280138, overlap 280141 CAACCACCGAAGCGC CGCCTCCGGCA GACGGGCG TGCCGGGGGCG TGTTTGAAACCGGCT TERM 368 280508 - 280492 - g 77 -7.3 -4.56775 | ATTCGCGGCGAAAAA TGGCTGA CCC TCAACCA GGGCGATGAGTACAT lfgH 280027 - 280692 + | lateral flagellar L-ring protein LfgH TERM 369 280997 - 280961 - g 77 -6.5 -4.66833 | opp_overlap 280968, overlap 280963 CCCGAAGGTGAAAAA CGTC-GCCGCGGTGGCG GTGAG CGCCAC-GCTGCCGCCG ATGTACTCGCGCGGG lfgI 280692 - 281807 + | lateral flagellar P-ring protein LfgI lfgJ 281807 - 282106 + | lateral flagellar peptidoglycan hydrolase LfgJ TERM 370 282128 - 282104 - f 78 -8.5 -4.05446 | opp_overlap 282090 282127, overlap 282107 TCGCCGAAGCATAAA TGAGGCTCCGA CGT TCGGTGCCTGA TGCGACGCTGTCTCG TERM 371 282125 - 282107 - f 73 -10.2 -3.0682 | opp_overlap 282090, overlap 282104 CCGAAGCATAAATGA GGCTCCGA CGT TCGGTGCC TGATGCGACGCTGTC TERM 372 282273 - 282240 - f 74 -9.5 -3.29511 | opp_overlap 282247 282248 282250, overlap 282207 282241 GCTATCGGTGCACAA CGCCTGATGCGACGC TGAC GCGTCTTATCAGGCC TACGGGTCCGCGCCT TERM 373 282272 - 282241 - f 84 -13 -2.57564 | opp_overlap 282247 282248 282250, overlap 282207 282240 CTATCGGTGCACAAC GCCTGATGCGACGC TGAC GCGTCTTATCAGGC CTACGGGTCCGCGCC TERM 374 282390 - 282357 - f 74 -9.5 -3.29511 | opp_overlap 282364 282365 282367, overlap 282324 282358 GCTATCGGTGCACAA CGCCTGATGCGACGC TGAC GCGTCTTATCAGGCC TACGAGTTCGCACAT TERM 375 282389 - 282358 - f 84 -13 -2.57564 | opp_overlap 282364 282365 282367, overlap 282324 282357 CTATCGGTGCACAAC GCCTGATGCGACGC TGAC GCGTCTTATCAGGC CTACGAGTTCGCACA TERM 376 283277 - 283239 - g 72 -8.9 -3.73224 | overlap 283265 TGAGCGGGCAGCAAA GCTCGACCATC-GCGCTGG AAA CCAACGCCGATGG-CACGC CGACCATGTCGCTGA TERM 377 283381 - 283366 - g 75 -6.8 -4.30576 | GTTTGATTATCAAAA CGACGT GCTG ACGCCG CTGACCGACACCATC TERM 378 283471 - 283483 + G 77 -6.9 -4.55295 | opp_overlap 283438 283436 TCTCAACGGTAACCC CGGCG AGC CGCTG TTTATTTATGACGCC TERM 379 283634 - 283614 - g 70 -9.7 -3.13522 | overlap 283612 AGGCGCTGATCAACA TCTCCACCG AAC CGCTGGAGA TAGCCAACCTTGGCA lfgK 282527 - 283903 + | lateral flagellar hook associated protein 1 lfgL 283918 - 284847 + | lateral flagellar hook associated protein 3 TERM 380 284982 - 284966 - g 70 -4.4 -4.56597 | gap 1 GCGGTGCGGCAAAAA CTC-CCG GCGA CGGCGAG TGAATATCCGGCCTC TERM 381 285199 - 285176 - g 74 -8.8 -3.87373 | opp_overlap 285175, overlap 285177 285180 CAGATGCTGGACAAA CGCACCGC GCTTTCCG GCGGCGCG GTGGACCGCCAGTTG lafW 284864 - 285841 + | lateral flagellar hook associated protein LafW TERM 382 285849 - 285887 + T 81 -11.7 -3.04792 | opp_overlap 285861, overlap 285851 TGGGGTAATTATCGG TAGGCCGGATAAGACGC GTTTA GCGTCGCATCCGGCATA TATTGGCACTCATCA TERM 383 285851 - 285885 + T 71 -9.9 -3.08073 | opp_overlap 285861, overlap 285849 GGGTAATTATCGGTA GGCCGGATAAGACGC GTTTA GCGTCGCATCCGGCA TATATTGGCACTCAT lafZ 286793 - 285900 - | lateral flagellar transmembrane regulator LafZ lafA 287229 - 288143 + | lateral flagellar flagellin LafA TERM 384 288187 - 288216 + F 100 -16.5 -3.53091 | opp_overlap 288190 288193, overlap 288190 288193 GCCTTATCCGGCTAC GAACAACACCGCC TGCG GGCGGTGTTGTGC TTTCAGCGGCAGGCT TERM 385 288190 - 288213 + F 100 -16.8 -2.90496 | opp_overlap 288190 288193, overlap 288187 288193 TTATCCGGCTACGAA CAACACCGCC TGCG GGCGGTGTTG TGCTTTCAGCGGCAG TERM 386 288213 - 288190 - f 100 -16.8 -3.14564 | opp_overlap 288187 288190 288193, overlap 288193 TTATCCGGCTACGAA CAACACCGCC TGCG GGCGGTGTTG TGCTTTCAGCGGCAG TERM 387 288210 - 288193 - f 100 -12.7 -3.71848 | opp_overlap 288193 288190 288187, overlap 288190 TCCGGCTACGAACAA CACCGCC TGCG GGCGGTG TTGTGCTTTCAGCGG TERM 388 288193 - 288210 + F 95 -12.7 -3.60151 | opp_overlap 288190 288193, overlap 288190 288187 TCCGGCTACGAACAA CACCGCC TGCG GGCGGTG TTGTGCTTTCAGCGG TERM 389 288322 - 288298 - f 84 -7.3 -4.99035 | TTATTCACATAAAAA TTATTGGCA CGCCTTT TGCCAATAA CCTGACATCGTTATC TERM 390 288463 - 288485 + G 83 -9.9 -4.07687 | opp_overlap 288452 288450 AGCAGCGGCCTGGAC TCGCTCAGC TCAGC GTTGAGCGA TTTTCAGAGCGCCGT TERM 391 288658 - 288669 + G 70 -7.2 -4.13767 | ACCACGTTCAGTATG GGCG ACGA CGCC TTTTCCGCTACCGGC lafB 288349 - 289665 + | lateral flagellar hook associated protein 2 TERM 392 289763 - 289724 - g 78 -8.5 -4.19624 | gap 1, opp_overlap 289727 TATTCGCAATACAAA GAGGTCGATCTCGCGGCG CGTAC CGCTGCGGCATCG-CCTC TTGAACTGGTGCTGG lafC 289688 - 290080 + | lateral flagellar chaperone protein LafC lafD 290085 - 290396 + | lateral flagellar chaperone protein LafD TERM 393 290734 - 290719 - g 70 -6.8 -4.07687 | gap 1 AGCGGTGGTGCAAAA CGCGGCG CAA CGCC-CG ACGCAGCAGCAGGAA lafE 290393 - 291454 + | lateral flagellar hook length control protein LafE lafF 291462 - 291929 + | lateral flagellar basal body-associated protein LafF lafS 291949 - 292668 + | lateral flagellar sigma factor 28 protein LafS TERM 394 292896 - 292885 - g 84 -3.6 -5.1861 | overlap 292887 GTGATCAGTAAAAAA CAGC TCGG GCCG GAGTTTCAGCGCCAG lafT 292681 - 293544 + | lateral flagellar motor protein A TERM 395 294342 - 294311 - g 77 -5.8 -4.62069 | gap 1, opp_overlap 294312 294313, overlap 294319 GCTGGACGCGAAAAA TCCGCAAAGCGCGGG CAA CCGGCGCATTG-AGA TTATGGTGCTGACTA TERM 396 294335 - 294319 - g 73 -9.3 -3.68853 | opp_overlap 294313 294312, overlap 294311 CGAAAAATCCGCAAA GCGCGGG CAA CCGGCGC ATTGAGATTATGGTG lafU 293547 - 294470 + | lateral flagellar motor protein B TERM 397 295433 - 295413 - g 70 -6.9 -4.05788 | GGGGGTGAAATTAAA GTTTGATGA TTT TCAGCAAAC CACTCAGGAGCACGT dinB 294541 - 295596 + | DNA polymerase IV EcSMS35_0286 295648 - 295941 + | addiction module antitoxin EcSMS35_0288 296353 - 296805 + | acetyltransferase TERM 398 296828 - 296848 + F 72 -3.1 -4.89477 | TTGCAAAGAAAATAA CGCCCGCCT AGT ATGTGCGCG TTTTCTTATTCCACA EcSMS35_0289 296996 - 298135 + | hypothetical protein EcSMS35_0290 298132 - 298746 + | peptidyl-tRNA hydrolase domain-containing protein TERM 399 298790 - 298759 - T 100 -17.3 -3.86776 | TAATGAAGGATGAAA CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG CAAATCAAATAATTA pepD 300260 - 298803 - | aminoacyl-histidine dipeptidase TERM 400 298922 - 298943 + g 71 -2.2 -5.00616 | opp_overlap 298922 TTGGCCCGATAGAAA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGACC TERM 401 299858 - 299868 + g 72 -6.8 -4.25104 | GCACTTCCAGCGGGC CGTG AAC CACG TTTTCGTCAGCCAGA TERM 402 300241 - 300218 - G 90 -9 -4.57837 | gap 1, opp_overlap 300220 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG gpt 300521 - 300979 + | xanthine phosphoribosyltransferase TERM 403 300983 - 301013 + F 83 -7.4 -4.74103 | overlap 300986 TCCGGTCGCTAATCT TTTCAACGCCTGGC ACT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 404 300986 - 301010 + F 100 -17.9 -4.47888 | overlap 300983 GGTCGCTAATCTTTT CAACGCCTGGC ACT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 405 301596 - 301619 + G 72 -4.4 -4.70659 | overlap 301597 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 301071 - 302315 + | fermentation-respiration switch protein TERM 406 302346 - 302328 - f 75 -9 -3.61889 | opp_overlap 302320, overlap 302320 TAAAAATTTGCTAAA TTTTACCA ATT TGGTAAAA CAGTTGCATCACAAC crl 302373 - 302774 + | sigma factor-binding protein Crl TERM 407 302806 - 302781 - T 75 -9.1 -3.64822 | gap 1, opp_overlap 302781, overlap 302782 ACGGCGTGAGTGAAA TGTGCCGGATGC ATC ACATCCGGCA-A TATCCATTAAAACTG TERM 408 302806 - 302782 - T 74 -10.7 -2.78679 | opp_overlap 302781, overlap 302781 CGGCGTGAGTGAAAT GTGCCGGATGC ATC ACATCCGGCAA TATCCATTAAAACTG phoE 303868 - 302813 - | outer membrane pore protein E TERM 409 303575 - 303585 + g 79 -2.4 -5.21709 | TTTCAACCCGGCAAA AGCG AGA CGCG TTTTTTGCTGTGCAG proB 304156 - 305259 + | glutamate 5-kinase proA 305271 - 306524 + | gamma-glutamyl phosphate reductase TERM 410 306531 - 306585 + F 72 -8.4 -3.69437 | opp_overlap 306531, overlap 306584 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 411 306585 - 306531 - f 89 -8.4 -4.86731 | opp_overlap 306531 306584 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 412 306606 - 306629 + F 72 -10.4 -2.90496 | overlap 306606 306608 TTTAACCTTGTCCAC CGTGATTCAC GTTC GTGAATCATG TCCTTTCAGGGCCGA TERM 413 306608 - 306627 + F 71 -9.4 -3.00525 | overlap 306606 306606 TAACCTTGTCCACCG TGATTCAC GTTC GTGAATCA TGTCCTTTCAGGGCC EcSMS35_0299 306879 - 308063 + | phage integrase family site specific recombinase EcSMS35_0300 308165 - 309130 + | hypothetical protein TERM 414 309555 - 309590 + T 95 -10.7 -4.80882 | TGAAATGATGGTGTT TTATATTGGAGCTTT ATGAGG GAAGCTCCAATATGA TTTTTAATGTGCAGT EcSMS35_0301 310773 - 309610 - | hypothetical protein TERM 415 309704 - 309722 + g 72 -7.6 -3.86202 | GCATTGGTGACATCG GAAAAAAT ATG ATTTTTTC TTTCATCTCGTGACG TERM 416 310522 - 310534 + g 71 -2.7 -4.8743 | TTTTGGAGAGTAAAA TTTAG AAT CTGAA TTTATTTGTTTTAAA EcSMS35_0302 311219 - 310770 - | response regulator EcSMS35_0303 314491 - 311216 - | hypothetical protein TERM 417 312873 - 312856 - G 78 -5.7 -4.82901 | TGCTTTTGACAAAAA TATCTAT CAAT ATAGATA AGGCCACGCTTGCAT EcSMS35_0304 314956 - 315267 + | IS911 transposase orfA TERM 418 315276 - 315294 + F 71 -8.9 -3.33087 | ACGATAGTTTCCAGA CTGAGTG ACAGC CACTCAG TTGTCAGCCTCTGTT EcSMS35_0305 315387 - 316133 + | IS911 transposase orfB TERM 419 316291 - 316327 + F 100 -16 -4.13767 | gap 1, opp_overlap 316296, overlap 316296 GACACCTGCATACTC CCA-AAGCCCCTGACGC GTCT GCGTCAGGGGCTTGTGC TTTTAAGGTACACCG TERM 420 316296 - 316321 + F 100 -20.5 -3.68761 | opp_overlap 316296, overlap 316291 CTGCATACTCCCAAA GCCCCTGACGC GTCT GCGTCAGGGGC TTGTGCTTTTAAGGT TERM 421 316321 - 316296 - f 100 -20.5 -3.59262 | opp_overlap 316296 316291 CTGCATACTCCCAAA GCCCCTGACGC GTCT GCGTCAGGGGC TTGTGCTTTTAAGGT TERM 422 316623 - 316643 + F 100 -11.1 -5.06414 | CCTTTATTTCCCATA CGCCAGCCA TCG TCGCTGGCG TTTTTATTGACGGAG EcSMS35_0307 316666 - 317124 + | antirestriction protein EcSMS35_0308 317136 - 317615 + | RadC family DNA repair protein TERM 423 317676 - 317643 - g 71 -10.9 -2.88737 | opp_overlap 317671 317672, overlap 317642 GAATTATCAGTAAAC GCCGGGCGATGACGA TTTA CCGTCAGCATCCGGC CTCCCGCATTTTTCG EcSMS35_0309 317624 - 317845 + | hypothetical protein EcSMS35_0310 317865 - 318182 + | putative antitoxin module of toxin-antitoxin system TERM 424 318653 - 318627 - f 100 -16 -3.29649 | overlap 318640 318641 ATTTGATGAGATTAA CGACTCGATGAA AGT CTCATCGAGTCG CATGAAAAACAAGGT EcSMS35_0311 318634 - 318771 + | hypothetical protein EcSMS35_0312 318976 - 319149 + | hypothetical protein TERM 425 319156 - 319138 - f 100 -11.7 -5.24129 | GTTTTGCATAAAAAA GCCCACC ATTAA GGTGGGC AAAAGGAATGATTTA EcSMS35_0313 319364 - 319978 + | hypothetical protein TERM 426 320021 - 319991 - f 95 -12.8 -3.69283 | opp_overlap 319991 319997, overlap 319997 TAATGCATTGAATAA TAAAAATGGCGC AAATGCA GCGCCATTTTTA TAGGTTAAAAACATT TERM 427 319991 - 320021 + F 81 -12.8 -2.52795 | opp_overlap 319991 319997, overlap 319997 TAATGCATTGAATAA TAAAAATGGCGC AAATGCA GCGCCATTTTTA TAGGTTAAAAACATT TERM 428 320015 - 319997 - f 91 -7.4 -5.30348 | opp_overlap 319991 319997, overlap 319991 ATTGAATAATAAAAA TGGCGC AAATGCA GCGCCA TTTTTATAGGTTAAA TERM 429 319997 - 320015 + F 84 -7.4 -4.91712 | opp_overlap 319997 319991, overlap 319991 ATTGAATAATAAAAA TGGCGC AAATGCA GCGCCA TTTTTATAGGTTAAA TERM 430 320204 - 320180 - f 75 -8.5 -3.80855 | TCCCTGAAAAACGAA GCCCCGCGA TTATAGC TGGCGGGGC AGTGCAATTAATTAT EcSMS35_0314 320437 - 320577 + | hypothetical protein EcSMS35_0315 321579 - 320869 - | hypothetical protein EcSMS35_0316 323191 - 321548 - | hypothetical protein TERM 431 322672 - 322683 + gr 70 -5.8 -4.1711 | TCATTGTAAAGCTGC TGCC GACG GGCA TTTGTTGCAGATACT EcSMS35_0317 325706 - 323181 - | hypothetical protein EcSMS35_0318 326400 - 325732 - | hypothetical protein TERM 432 326441 - 326423 - R 95 -11.7 -4.24342 | CCGTCCAGGAATAAA GCAGGGG GGCTA CCCCTGC TGGTACATCAGAGAG matB 327045 - 326458 - | fimbrillin MatB TERM 433 326660 - 326690 + g 91 -7.6 -5.0538 | overlap 326661 CCGCCCAGTACGCCG TTGGCGGTATCG ATCATCA CGGTATCGCCAG TTTTTTCGACTGCCG TERM 434 326903 - 326928 + g 91 -7.5 -5.1615 | opp_overlap 326910, overlap 326905 AGGCTACCGAGTGGC GTCACAACCAG CTTA CTGGTGGTGTC TTTTTTGGCTGTTGC TERM 435 326905 - 326926 + g 78 -8.7 -4.20118 | opp_overlap 326910, overlap 326903 GCTACCGAGTGGCGT CACAACCAG CTTA CTGGTGGTG TCTTTTTTGGCTGTT matA 327662 - 327120 - | fimbrillin MatA TERM 436 327738 - 327722 - R 75 -9.5 -3.56092 | opp_overlap 327722 TCACTACTTTCCAAA CCTGTAA TTT TTACAGG TACATTCAGTTTCTT EcSMS35_0321 328339 - 328115 - | hypothetical protein EcSMS35_0322 328398 - 328517 + | hypothetical protein TERM 437 328694 - 328662 - T 100 -13 -4.26344 | opp_overlap 328666 ACATCCCCAGGAAAA TTAATGCTGGTGTA ATAAA TACACCAACATTAA TCCGGTCTGATTATT rpmJ2 328886 - 328746 - | ribosomal protein L36 rpmE2 329149 - 328886 - | 50S ribosomal protein L31 type B TERM 438 329661 - 329639 - R 77 -4.8 -5.00616 | opp_overlap 329641, overlap 329641 CCTCGCTTTAAAAAA GAGTGCACTT CGT AAGTGCCCTT ATATAAATAACGAGT TERM 439 329659 - 329641 - R 72 -7.4 -4.13561 | opp_overlap 329641, overlap 329639 TCGCTTTAAAAAAGA GTGCACTT CGT AAGTGCCC TTATATAAATAACGA TERM 440 329677 - 329688 + r 77 -4.4 -5.08169 | ATATAAATAACGAGT TTGG TCAA CCAA TTTTTTGACATGTAT EcSMS35_0325 331231 - 330089 - | oxidoreductase, FAD/FMN-binding TERM 441 331156 - 331179 + g 82 -2.4 -5.36441 | opp_overlap 331162, overlap 331160 331162 TTGTCATAGGAGCCA TAACGATACG ATTA CGTAGCTTTA TTTTTTCTGTCAGCA TERM 442 331160 - 331175 + g 77 -3.2 -5.16969 | opp_overlap 331162, overlap 331156 331162 CATAGGAGCCATAAC GATACG ATTA CGTAGC TTTATTTTTTCTGTC TERM 443 331385 - 331415 + r 72 -7.8 -3.9093 | overlap 331388 GCTTTTTTGTTTCTT TAATGAAATTTCTT TTT GAGTAATTTCATTA TTGTTGTGTAGTCAA EcSMS35_0326 332396 - 331476 - | hypothetical protein TERM 444 333168 - 333182 + G 70 -6.4 -4.20712 | AAAAGTAGCGGTGCA CTCTCA GCA TGGGAG TTTTCGAATGTTGTG EcSMS35_0327 332553 - 333479 + | LysR family transcriptional regulator EcSMS35_0328 333679 - 334572 + | LysR family transcriptional regulator TERM 445 334594 - 334573 - T 72 -8.7 -3.70773 | opp_overlap 334573 CGCTACACCGAATAA CGGGTCC TTTATCCT GGACCCG TTTGGGTATTAGCGG TERM 446 334573 - 334594 + T 75 -8.7 -3.76373 | opp_overlap 334573 CGCTACACCGAATAA CGGGTCC TTTATCCT GGACCCG TTTGGGTATTAGCGG EcSMS35_0329 335592 - 334603 - | aldo/keto reductase family oxidoreductase TERM 447 334840 - 334863 + g 80 -5.2 -4.90013 | overlap 334842 CCCTTTCTCCGCAGC CAGTTCACCT AACA AGGTGACCAG TTTTTCATTGGCTTC EcSMS35_0330 336470 - 335619 - | organophosphate reductase TERM 448 336947 - 336924 - H 77 -11.2 -2.73529 | overlap 336920 336921 TCTTACATAAAGGTA TTTCCTTTTC TGCG GAAAAGGAAA CCGGGAAATCCCCGG TERM 449 336948 - 336962 + H 89 -8.5 -4.82901 | opp_overlap 336920 336921 336948 CTGCGGAAAAGGAAA CCGGG AAATC CCCGG TTTTTCTGACAAGCA TERM 450 336962 - 336948 - H 82 -9.2 -4.19735 | opp_overlap 336948, overlap 336920 336921 CTGCGGAAAAGGAAA CCGGGA AAT CCCCGG TTTTTCTGACAAGCA TERM 451 337248 - 337278 + G 90 -9 -4.58395 | opp_overlap 337248 TAACGTGGAGAAAAA TGTCGCGTCGTTTG CCG CAAATGCCGGGACA TTTTTAAGCAGTCAG TERM 452 337278 - 337248 - g 85 -6.8 -4.8543 | opp_overlap 337248 TAACGTGGAGAAAAA TGTCGCGTCGTTTG CCG CAAATGCCGGGACA TTTTTAAGCAGTCAG TERM 453 337741 - 337705 - g 71 -2.1 -5.00616 | TCTGGCTGGAAAAAA TCGCCGGATATTGAGGA TTA TCAGGAACGCCCGGCGA ATGGTTGGGATATCC TERM 454 338803 - 338851 + G 74 -11.2 -3.16881 | opp_overlap 338802, overlap 338787 CTGAGCGCTAACGAG CCGTCAG-GTGATGTGGTTGCTGA TGG TCAGCAATCCCA-CACGCTGACGC TTACTGCGGTGGATA TERM 455 340425 - 340410 - g 71 -2.6 -4.91109 | gap 1, opp_overlap 340411 340420 CGTTGAGGATAAAAA TGGTAAC CCT GTT-CCA GGGAGCCTGGTGACC TERM 456 340956 - 340941 - g 76 -3.9 -4.91109 | opp_overlap 340951 340955, overlap 340942 CGCGGATGATAAAAA CGCGG TGCTCG CCGCA TCATCTGATGTGACT EcSMS35_0331 337036 - 341289 + | putative invasin TERM 457 341325 - 341353 + T 100 -14.8 -4.25681 | opp_overlap 341325 341328 CATTCTAATAAACAA TAATGGCGTTGA CATCT TCAACGCCATTA TTTATTGAATTGCCT TERM 458 341353 - 341325 - T 100 -14.8 -4.21438 | opp_overlap 341325, overlap 341328 CATTCTAATAAACAA TAATGGCGTTGA CATCT TCAACGCCATTA TTTATTGAATTGCCT TERM 459 341350 - 341328 - T 95 -12.1 -4.21772 | opp_overlap 341325, overlap 341325 TCTAATAAACAATAA TGGCGTTGA CATCT TCAACGCCA TTATTTATTGAATTG EcSMS35_0332 342267 - 341410 - | AraC family transcriptional regulator EcSMS35_0333 342515 - 343384 + | aldo/keto reductase family oxidoreductase TERM 460 343513 - 343472 - T 73 -10.1 -3.08679 | CTGTTTCAGGTAATA TGGCGTCAGGCTTCACCCA TTAG CAAGGAAAGCCTGACGCCT GAAAAAGTGAACAAC EcSMS35_0334 344139 - 343546 - | hypothetical protein EcSMS35_0335 344387 - 344151 - | hypothetical protein TERM 461 344456 - 344487 + r 100 -12.4 -4.45261 | overlap 344454 344459 TAAGATTCTTTTCTC TGAGACGCCAGAAT ATTT GTTCTGGCGTCTGA TTTTGAGTTTATTTG TERM 462 344459 - 344484 + r 95 -14.1 -3.16695 | overlap 344454 344456 GATTCTTTTCTCTGA GACGCCAGAAT ATTT GTTCTGGCGTC TGATTTTGAGTTTAT EcSMS35_0336 345821 - 344496 - | pyridine nucleotide-disulphide oxidoreductase TERM 463 345256 - 345246 - G 81 -6.8 -4.65895 | TTCCCGAGGCAAAAA CAGC GAA GCTG CCTCTAAAATGGTTA TERM 464 346051 - 346031 - H 76 -2.6 -5.26875 | gap 1, overlap 346035 TTTGTAATCAAAAAA CCAC-TCAG GAGT CTGATATGG ATGCTCTTAGCCGTT EcSMS35_0337 346048 - 346902 + | AraC family transcriptional regulator EcSMS35_0338 347428 - 348147 + | hypothetical protein TERM 465 348406 - 348386 - g 71 -3.3 -4.83615 | gap 1, opp_overlap 348386 348398 CAGCTCTCAGAAAAA GTGA-CGC AAAACG GCGGTCAC GTCTATTTTGCAAAA EcSMS35_0339 348158 - 349585 + | iron-sulfur cluster binding protein EcSMS35_0340 349578 - 350273 + | hypothetical protein EcSMS35_0341 350544 - 350347 - | hypothetical protein TERM 466 350413 - 350387 - G 100 -16.8 -3.53012 | opp_overlap 350387 CTGCTCTTCTGTAAA TATCCTGGCATT ACT AATGCCAGGATA TTTAAATTGAAAAAG TERM 467 350387 - 350413 + g 100 -16.8 -3.75153 | opp_overlap 350387 CTGCTCTTCTGTAAA TATCCTGGCATT ACT AATGCCAGGATA TTTAAATTGAAAAAG TERM 468 350536 - 350549 + g 74 -2.4 -5.08601 | GCCCAGAGTTTTGTT GGTA TTCATC TACC TTTTTCTTCAGATAA TERM 469 350642 - 350632 - R 83 -5.4 -5.19275 | ATCCAGAAAATAAAA TCTG CCG CAGA TAAATGAATTAATAG betA 352493 - 350805 - | choline dehydrogenase betB 353979 - 352507 - | betaine aldehyde dehydrogenase TERM 470 353163 - 353147 - G 70 -6.5 -4.1822 | overlap 353148 CCGGAGCTGAAGAAA TTCGCCA TCA TGGCGAT ATCGGCGGCGAGATC betI 354580 - 353993 - | transcriptional repressor BetI TERM 471 354379 - 354367 - G 72 -6.9 -4.21275 | GTAATCGATTCAAAA CCGCG TCA CGCAG CTGACTGGTGATATC TERM 472 354400 - 354419 + g 81 -5.8 -4.87665 | gap 1 TGGTGATATCGCGCA TGGT-TGCT TCC AGCAGACCA TTTTTGTCCCTGAAA TERM 473 354476 - 354460 - G 78 -9.3 -3.86346 | opp_overlap 354449 354475 TGATCCCCGTAGAAA CGCCTGC ACG GCGGGCG ATCTGCGCGATCGTT TERM 474 354741 - 354786 + G 91 -10.6 -4.21812 | gap 1, opp_overlap 354739 354741 354746, overlap 354746 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 475 354786 - 354741 - g 72 -10.6 -3.11922 | gap 1, opp_overlap 354741 354746, overlap 354739 354746 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 476 354781 - 354746 - g 72 -4.7 -4.67635 | gap 1, opp_overlap 354741 354746, overlap 354741 354739 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 477 354746 - 354781 + G 81 -4.7 -5.093 | gap 1, opp_overlap 354746 354741 354739, overlap 354741 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 478 355758 - 355770 + G 71 -9.1 -3.56576 | TACCATTCGCCAGTT CGTGC TGG GCACG TTGATTATTCCGTTT betT 354709 - 356742 + | BCCT family transporter TERM 479 356784 - 356759 - f 100 -13.3 -4.36914 | opp_overlap 356759 TGTTTTTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT TERM 480 356759 - 356784 + F 100 -15.5 -4.23281 | opp_overlap 356759 TGTTTTTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT EcSMS35_0346 357618 - 358706 + | LuxR-family transcriptional regulator EcSMS35_0347 359680 - 358748 - | LysR family transcriptional regulator TERM 481 358793 - 358811 + g 81 -6 -4.7373 | opp_overlap 358792 GATCCCCGTTAATAT GCCATTTG GCG CAAATTGC TTTTTAATCCACTGC EcSMS35_0348 360269 - 359772 - | hypothetical protein TERM 482 360611 - 360597 - g 77 -2.7 -5.04601 | TCGATAAAGTAAAAA CCTGC CTTGC GCTGG GTGTCGATATTAATA EcSMS35_0349 360527 - 361132 + | ankyrin repeat-containing protein EcSMS35_0350 361172 - 362035 + | hypothetical protein TERM 483 362120 - 362106 - g 90 -10 -4.43208 | ACACGTGCAAATAAA CTCGAC GGC GTCGAG CAGGCATTTGTGGCG TERM 484 362329 - 362298 - g 86 -10.8 -3.92324 | opp_overlap 362316 CTGTTCAACACCAAA GCGCAAAGCGGCTC GCAC GAGGCGCGTTACGC CACTATTGCCAGCGC EcSMS35_0351 362025 - 363572 + | acyl-CoA synthetase TERM 485 363775 - 363729 - g 77 -11.7 -3.21395 | gap 2, overlap 363727 363730 363756 363757 AGGCGCTGGATAACA TTGCTGATTCGCCGCTGGCAGAC AAA ATC-GCC-GCCGCGAATCAGCAG GCGCCGGAGCGCATT TERM 486 363774 - 363730 - g 93 -15.2 -2.52623 | gap 2, overlap 363729 363727 363756 363757 GGCGCTGGATAACAT TGCTGATTCGCCGCTGGCAGAC AAA ATC-GCC-GCCGCGAATCAGCA GGCGCCGGAGCGCAT TERM 487 363767 - 363756 - g 74 -5.8 -4.52589 | overlap 363730 363729 363727 363757 CGCTGGCAGACAAAA TCGC CGCC GCGA ATCAGCAGGCGCCGG TERM 488 364966 - 364955 - g 74 -5.8 -4.56597 | GCCTGCTTCGAAAAA GCCA TTCT TGGC TGGTGCGAACGTTAC EcSMS35_0352 363572 - 364990 + | hypothetical protein TERM 489 365035 - 365013 - f 86 -13.5 -2.79915 | ACGCACCTTACGATA CCTTCTCCC TTTTG GGGAGAAGG GCAACCTCACTCTCA EcSMS35_0353 365085 - 366035 + | carbamate kinase family protein TERM 490 366645 - 366629 - g 72 -5.1 -4.56597 | overlap 366630 TTCCGGCCTGAAAAA TCTGCAA AAT TTGCAGG CGGTGCTGGCGCGAC EcSMS35_0354 366045 - 367427 + | amidohydrolase family protein TERM 491 367488 - 367472 - f 72 -9.4 -3.19889 | CAGTAAGAGATTTAA GCCCCA GGGAG TGGGGC GGCCTGAGTATGAGT EcSMS35_0355 367651 - 367788 + | hypothetical protein TERM 492 368459 - 368449 - g 77 -8.2 -4.14392 | CGCGAAGCGGCAAAA GCCC TGG GGGC CGATGAAGTTGTTAA EcSMS35_0356 367804 - 368853 + | zinc-binding dehydrogenase family oxidoreductase TERM 493 368929 - 368890 - f 71 -8.9 -3.37493 | gap 2, opp_overlap 368890, overlap 368891 GGTTTAACATATTAA CTTCGCTCTCCACTTAACT TTTT AGTTAAG-G-AGAGCGAAA TAATATCAAAGTAGC TERM 494 368928 - 368891 - f 70 -10.2 -2.62175 | gap 2, opp_overlap 368890, overlap 368890 GTTTAACATATTAAC TTCGCTCTCCACTTAACT TTTT AGTTAAG-G-AGAGCGAA ATAATATCAAAGTAG EcSMS35_0357 369096 - 369911 + | hypothetical protein TERM 495 370460 - 370439 - T 91 -7.2 -5.31059 | AGAGCAATGAAAAAA GCCCACAC AGGGGA GAGTGGGC TGAAATGGGAAGCTA EcSMS35_0359 371219 - 370587 - | putative homoserine/threonine efflux protein TERM 496 370848 - 370830 - G 82 -3.1 -5.30686 | AATACTGATAAAAAA TAACACG GTTTG CGGGTTA GAGAGATCGGTAATT EcSMS35_0360 371405 - 371680 + | hypothetical protein EcSMS35_0362 371707 - 371829 + | hypothetical protein prpR 373367 - 371781 - | propionate catabolism operon regulatory protein PrpR TERM 497 372548 - 372579 + g 79 -12.4 -3.04461 | gap 1 CAAACGGATGCGACT TTTTGCCCTGTCGCG CAT CGTGGC-GGGCAAAA TATTCCCGATGAATC TERM 498 373934 - 373924 - g 72 -8.2 -3.80862 | AAATCGATGATTAAA GCCG GTG CGGC AGGATTGCATATTGA TERM 499 374402 - 374390 - g 70 -5.5 -4.43501 | AAGGCACGCAGAAAA GCGTC ATC GACAC CATGCAGACCCGCAA prpB 373606 - 374496 + | methylisocitrate lyase TERM 500 374675 - 374653 - g 83 -9.9 -4.08216 | GCACCGTGGGTAAAA GCGGCAATG ATTTG CATTACCGC GGCTACGACATTCTT prpC 374541 - 375710 + | 2-methylcitrate synthase TERM 501 375946 - 375921 - g 79 -4.5 -5.02074 | overlap 375905 375922 CCAGCCTGTAAAAAA CTGCTGGGGCC AATT GTCCCCGGCAC CGTCGTACCTAACGG prpD 375744 - 377195 + | 2-methylcitrate dehydratase TERM 502 377444 - 377402 - g 72 -9.8 -3.29461 | gap 1, opp_overlap 377401, overlap 377427 377429 CAACTTGTGTCACAA CGCTATCGACCGCTGGCTG GAGAAA CAGCCAGAGG-CGCTGGCG CTGATTGCCGTCTCT prpE 377235 - 379121 + | propionate--CoA ligase codB 379358 - 380617 + | cytosine permease TERM 503 380845 - 380826 - g 72 -10 -3.30635 | CAAACCGCCGGACAA CCGAACTG GAAT CAGTCCGG CACGCTGTTTGAAGG TERM 504 381064 - 381084 + G 74 -6.2 -4.50976 | gap 1, opp_overlap 381081, overlap 381067 TTGATCTGCAAATCG TCGCCTTCC CGCA GGAAGG-GA TTTTGTCGTATCCCA codA 380607 - 381890 + | cytosine deaminase cynR 382922 - 382023 - | transcriptional regulator cynR TERM 505 382151 - 382127 - G 72 -5 -4.63218 | gap 1 TCCGCCGCAACAAAA CCGCCGTT-CT CTCC AGTAACGGTGG GGCAAGAGAAATCGC TERM 506 382493 - 382447 - G 100 -15.9 -3.72576 | gap 1 CTTTCTGTCAGTAAA GGAATTGCCTCCAGCTCCGGCG AATG CGCAGGCGC-GAAGGCAATCCC AACGTCCAGCTCGTC TERM 507 383070 - 383097 + G 71 -9.2 -3.54424 | gap 1, overlap 383073 CCTTAAATTCCAGCG CGAGGCATTTCCG AAG CGGGAA-GCCTTG TTTAAACAGCTGGCG cynT 383032 - 383691 + | carbonic anhydrase cynS 383722 - 384192 + | cyanate hydratase TERM 508 384487 - 384510 + G 81 -13.2 -2.78547 | opp_overlap 384487, overlap 384484 AGCTTTACCCCCAAA GTGCGCTGTT GCTT AGCAGCGCAC TGCTTGGTGGAGTGG TERM 509 384510 - 384487 - g 81 -11 -3.57263 | opp_overlap 384487 384484 AGCTTTACCCCCAAA GTGCGCTGTT GCTT AGCAGCGCAC TGCTTGGTGGAGTGG cynX 384225 - 385379 + | cyanate transport protein CynX TERM 510 385453 - 385416 - T 81 -11.3 -3.20236 | opp_overlap 385420, overlap 385409 385419 TAATGGAAGAGTGAA TTATTGTCGGATGTGCC CAAT GGCGCATCCGACATTTA TTTCAGTGCTTATTT TERM 511 385450 - 385419 - T 85 -13 -2.7898 | opp_overlap 385420, overlap 385416 385409 TGGAAGAGTGAATTA TTGTCGGATGTGCC CAAT GGCGCATCCGACAT TTATTTCAGTGCTTA TERM 512 385420 - 385449 + T 100 -18.7 -4.47786 | opp_overlap 385419 385416 385409 GGAAGAGTGAATTAT TGTCGGATGTGCC CAAT GGCGCATCCGACA TTTATTTCAGTGCTT lacA 386087 - 385467 - | galactoside O-acetyltransferase LacA TERM 513 386104 - 386135 + r 71 -8.6 -3.45366 | opp_overlap 386114, overlap 386105 CCGTCCTGATATGTT GGTCGGATAAGGCG CTCG CGCCGCATCCGACA TTGATTGCTTAAGCG TERM 514 386105 - 386134 + r 79 -12.1 -2.66899 | opp_overlap 386114, overlap 386104 CGTCCTGATATGTTG GTCGGATAAGGCG CTCG CGCCGCATCCGAC ATTGATTGCTTAAGC lacY 387397 - 386144 - | lactose permease TERM 515 386196 - 386182 - G 70 -7 -4.0942 | GACGCAGTAGAGAAA GCGGAC CGG GGCCGC TAAGCGTGAACACGG TERM 516 387281 - 387244 - G 78 -8.7 -4.24786 | opp_overlap 387244 387246 387262, overlap 387247 GCGAGAACAGAGAAA TAGCAGCAAAAATAATA CCCG TATCACTTTTGCTGATA TGGTTGATGTCATGT TERM 517 387330 - 387314 - G 72 -4.4 -4.64657 | overlap 387316 CCAAATCGGGAAAAA TGGGAA GTAGG CTCCCA TGATAAAAAAGTAAA TERM 518 387420 - 387442 + r 82 -9 -4.24569 | opp_overlap 387419 387421, overlap 387416 387421 TTCCTTACGCGAAAT ACGGGCAGAC ATG GCCTGCCCGG TTATTATTATTTTTG TERM 519 387421 - 387441 + r 83 -12.5 -3.12301 | opp_overlap 387419 387421, overlap 387420 387416 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT TERM 520 387441 - 387421 - R 100 -14.7 -3.38046 | opp_overlap 387421 387420 387416, overlap 387419 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT lacZ 390523 - 387449 - | beta-galactosidase TERM 521 389609 - 389630 + g 83 -10.1 -4.14392 | overlap 389610 ATAGAGATTCGGGAT TTCGGCGCT CCAC AGCGCCGGG TTTTCGACGTTCAGA TERM 522 389610 - 389629 + g 75 -11.4 -3.08314 | overlap 389609 TAGAGATTCGGGATT TCGGCGCT CCAC AGCGCCGG GTTTTCGACGTTCAG TERM 523 389965 - 389975 + g 93 -8.2 -5.00884 | AGCGCAGCACCATCA CCGC GAG GCGG TTTTTTCCGGCGCGT TERM 524 390178 - 390159 - G 79 -10 -3.73647 | gap 1 GTGAGCGAGTAACAA CCCGTCGGA TTC TCCG-CGGG AACAAAAGGCGGATT TERM 525 390340 - 390301 - G 100 -17.9 -2.55 | opp_overlap 390277, overlap 390291 GAAGATCGCAATCCA GCCAGCTTTCCGGCACC GCTTCT GGTGCCGGAAACCAGGC AAAGCGCCATTCGCC lacI 391728 - 390646 - | lactose operon repressor mhpR 392650 - 391805 - | mhp operon transcriptional activator TERM 526 392691 - 392668 - H 70 -6 -4.24602 | gap 1, opp_overlap 392682 ATATAGTTAAAACAA CG-TTGTGCAC CTG GTGCACATTCG GGCATGTTTTGATTG TERM 527 392798 - 392775 - H 73 -6 -4.43307 | gap 1, opp_overlap 392789 TTTTTAACAAAACAA GTTGCGCTGTA CTG TGC-GCGCAAC GGCATTTTGTCCGAG mhpA 392829 - 394493 + | 3-(3-hydroxy-phenyl)propionate hydroxylase mhpB 394495 - 395439 + | 2,3-dihydroxyphenylpropionate 1,2-dioxygenase TERM 528 396211 - 396223 + G 76 -10.5 -3.33671 | GTCTGCGTCTGCTGT CCGGC ATT GCCGG TTCTGAACTGCATAT mhpC 395457 - 396323 + | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase TERM 529 396892 - 396872 - g 70 -4 -4.64766 | gap 1, overlap 396873 396874 GTTAGACCTGAAAAA CTGCGCCAT GAAG ATGACGC-G TAATAACGAAGAGGT mhpD 396333 - 397142 + | 2-keto-4-pentenoate hydratase TERM 530 397423 - 397396 - g 70 -4.1 -4.62069 | opp_overlap 397400 397401 397415, overlap 397400 CGCGCATGTGAAAAA CGATGCCGCTT TGCGCG AAGCGAAACCG GATATTCGCTTAATT TERM 531 397569 - 397583 + G 80 -11.4 -3.33696 | TGGTGGCGGCAGTTT CACGCG TGG CGCGTG TTCATTACGCCGAAA TERM 532 398069 - 398049 - g 74 -2.6 -5.07567 | gap 2, overlap 398051 CGACAGCGGAAAAAA TG-GC-CCAG TCA CTGGCGCGCA AGGCAGGAGAAGCGG mhpF 397139 - 398089 + | acetaldehyde dehydrogenase mhpE 398086 - 399099 + | 4-hydroxy-2-oxovalerate aldolase TERM 533 399309 - 399329 + G 95 -9 -5.0917 | CATCATCTTCATCCC GCCTGATG CTGAC CATCGGGC TTTGTTTTTTGGTCG TERM 534 399719 - 399750 + G 74 -10 -3.53012 | overlap 399714 ATGTATTGCGGTGTT CCCATTGGCGCGGC GCTG GCGGCGACACTGGG TTTCGCGGGGGCAAA EcSMS35_0384 399275 - 400486 + | putative 3-hydroxyphenylpropionic acid transporter TERM 535 400697 - 400678 - g 81 -4.9 -5.06103 | overlap 400667 400679 AGAACGGCGAAAAAA TCGCGCG TTCAGG CGCGTGA AGCTCGGGCGGCGGT EcSMS35_0385 400588 - 401127 + | hypothetical protein fghA2 402085 - 401252 - | S-formylglutathione hydrolase TERM 536 402043 - 402067 + g 70 -3.5 -4.68424 | overlap 402045 AATGCCGATACACAT TTTGCCAGC CGCCAAA GCTGGCATG TTTTTCAATGAGTTC TERM 537 402045 - 402065 + g 74 -8.3 -3.95214 | overlap 402043 TGCCGATACACATTT TGCCAGC CGCCAAA GCTGGCA TGTTTTTCAATGAGT adhC 403286 - 402177 - | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase EcSMS35_0388 403596 - 403321 - | hypothetical protein TERM 538 403672 - 403622 - R 100 -22.4 -3.06302 | gap 1, opp_overlap 403626 403631, overlap 403624 403626 ATCATCTGCACGCAA TATACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTATA TAACACTGGAGAATA TERM 539 403670 - 403624 - R 100 -20.6 -3.08996 | gap 1, opp_overlap 403626 403631, overlap 403622 403626 CATCTGCACGCAATA TACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTA TATAACACTGGAGAA TERM 540 403668 - 403626 - R 100 -18.8 -3.10344 | gap 1, opp_overlap 403626 403631, overlap 403624 403622 TCTGCACGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 541 403626 - 403668 + r 100 -18.8 -2.88544 | gap 1, opp_overlap 403626 403624 403622, overlap 403631 TCTGCACGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 542 403631 - 403663 + r 86 -12.9 -2.88999 | gap 1, opp_overlap 403626 403624 403622, overlap 403626 ACGCAATATACTATA GGGGGGTATGCTAT ATGTCA AT-GCATACCCCCC TATAGTATATAACAC EcSMS35_0389 404554 - 403781 - | hypothetical protein EcSMS35_0390 404996 - 404556 - | putative acyltransferase EcSMS35_0391 406311 - 405115 - | glycosyl transferase, group 2 family protein TERM 543 405986 - 405975 - G 100 -5.8 -5.48825 | CATCACTTAAAAAAA CCTG GTCG CAGG TGGCGTAATTGAGGC TERM 544 406210 - 406224 + g 100 -2.1 -5.81412 | gap 1, opp_overlap 406220 ATAAGCAGGTATAAT GGC-GT CAAT ACAGCC TTTTTTTTGGCTGGG EcSMS35_0392 406992 - 406321 - | putative GlcNAc-PI de-N-acetylase TERM 545 406931 - 406946 + g 71 -3.2 -4.86731 | opp_overlap 406931 406940 GGATGTGCGCCAATA GCAAGG ATAC CCTTTC TTTTATTTGCCGAAG TERM 546 407055 - 407069 + rH 76 -10 -3.38317 | opp_overlap 407036 407033 407053, overlap 407054 407049 CTCAGAGACGTAATC TCTGGC GCA GCCAGA TGTTAATTTATAAAT TERM 547 407274 - 407262 - RH 70 -6.3 -4.17608 | opp_overlap 407261 407267 TGCATTTAAAAAATA TGTTC TGT GAACA AGTATTGTTTATATA EcSMS35_0393 407609 - 407430 - | hypothetical protein TERM 548 407719 - 407699 - gH 85 -11.1 -3.72576 | CCGTGGCGTATCAAA CCTCCGCCG AAC CGGCGAAAG TGGCTCAGGCCGACA tauA 407608 - 408570 + | taurine ABC transporter, periplasmic taurine-binding protein TERM 549 408912 - 408891 - g 74 -5.9 -4.53303 | gap 1, overlap 408895 CAGGCGTAGAGAAAA TGCAGCGACT GGA AATCGC-GCA CCAGATGCTGAAAAA TERM 550 408989 - 409030 + G 84 -10.8 -3.71848 | GGCGGTCAACGTCAG CGGGTGGGGATTACCCGC GCGCTG GCGGCGAATCCCCAGCTG TTATTACTCGACGAA tauB 408584 - 409351 + | taurine ABC transporter, ATP-binding protein TERM 551 410009 - 410021 + G 84 -10.5 -3.74749 | CGGCGGAGCTGATTG CCGCG ACG CGCGG TTTAGGATTTATGGT TERM 552 410076 - 410106 + G 88 -8.2 -4.65933 | GACTGACGTGGTGCT GGCGGGGATCGCGG TGA TTGCGATTATCGCC TTTCTTTTAGAACTG tauC 409348 - 410175 + | taurine uptake ABC transporter, permease protein TERM 553 410347 - 410359 + G 81 -9.1 -4.08767 | CGCAGCAGCAACGCG CGCTG GCC CAGCG TTTTGGCGAACTGCA tauD 410172 - 411023 + | taurine dioxygenase TERM 554 411053 - 411032 - T 100 -14.5 -3.60792 | GGGGTAAGGGGGAAA TGCCGGGTT GGAT AACCCGGCA TAATGATCATTAACG hemB 412037 - 411063 - | delta-aminolevulinic acid dehydratase TERM 555 412180 - 412196 + rH 74 -2.3 -5.24003 | opp_overlap 412171 412180 AAATAGCAATAAATT TATATTC ATT GAAAATA TTTTTAATTTTTATT EcSMS35_0399 414165 - 413260 - | IS2 transposase orfB EcSMS35_0400 412563 - 413420 + | hypothetical protein EcSMS35_0401 414533 - 414123 - | IS2 transposase orfA EcSMS35_0402 414664 - 416808 + | outer membrane autotransporter TERM 556 416876 - 416847 - f 100 -18.1 -3.76952 | opp_overlap 416850, overlap 416850 GTTATTTAATCTAAA TAATGCCCGTCAA GGAT TTGACGGGCATTA CTGCAAAGGACGCGC TERM 557 416873 - 416850 - f 100 -15.4 -4.01381 | opp_overlap 416850, overlap 416847 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 558 416850 - 416873 + F 100 -15.4 -3.14132 | opp_overlap 416850 416847 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 559 417508 - 417472 - g 82 -11.8 -3.55866 | gap 1, opp_overlap 417484, overlap 417476 CTATATCGAAATGAA TAAAGGCAAACTGGTCG CTAT CAACC-GTTTGCCTTCA GAGTATTAATCAGGA TERM 560 417504 - 417476 - g 90 -10.4 -4.40298 | gap 1, opp_overlap 417484, overlap 417472 ATCGAAATGAATAAA GGCAAACTGGTCG CTAT CAACC-GTTTGCC TTCAGAGTATTAATC EcSMS35_0403 416894 - 417517 + | hypothetical protein ampH 418675 - 417518 - | penicillin-binding protein AmpH TERM 561 418139 - 418153 + g 70 -4.9 -4.55128 | overlap 418130 418129 GGAGTACGCGGCCTG GCTGC CCGGC GCGGC TTTTAGTTTGGCAGT EcSMS35_0405 418813 - 419007 + | hypothetical protein smbA 419027 - 420247 + | protein SbmA EcSMS35_0407 420260 - 421354 + | putative lipoprotein EcSMS35_0408 421720 - 421412 - | hypothetical protein TERM 562 421493 - 421481 - G 81 -6.2 -4.7373 | GCAGCCTACTAAAAA CGGG ATCAG CCCG AAAATGGTGCCGACA TERM 563 421662 - 421634 - G 77 -8.2 -4.13711 | gap 1, overlap 421637 GCAAAACAGCACAAA CAACGCATAGGCA ATAT TGCC-AGGCGTTG AAGAGGCATTGCGAT EcSMS35_0409 421980 - 422192 + | hypothetical protein TERM 564 422207 - 422183 - T 84 -8.6 -4.42851 | opp_overlap 422183 TGAAGAAACTGAAAA CGCCCAATAA GAATA TTACCGGGCG TTTGAATATTACATT ddlA 423310 - 422216 - | D-alanine--D-alanine ligase A TERM 565 422415 - 422402 - G 70 -4.5 -4.56597 | CTCTGGGGTTAAAAA CACGT CTAC ACGCG CCATGCCTGCGCATC TERM 566 423200 - 423210 + g 75 -6.8 -4.42653 | opp_overlap 423200 423199 GCCCAGCAGCACAAC GTCG AAG CGAC TTTTATCAATGGCAT EcSMS35_0411 423388 - 423591 + | hypothetical protein EcSMS35_0412 423773 - 424033 + | hypothetical protein TERM 567 424076 - 424090 + F 79 -4.2 -5.21459 | overlap 424067 424078 AAAGCTGTCACGGCC GAGACT TAT AGTCGC TTTGTTTTTATTTTT TERM 568 424376 - 424408 + G 90 -6.9 -5.04385 | GACTCGGAAATTACT GCCGCACGCAATT ATGCCGA AGGTGCGGGCGGC TTTTTTAAAGGTATC TERM 569 424487 - 424476 - g 100 -7.2 -5.7946 | CGCTGAATAAAAAAA CCGG CAAA CCGG ACTACGTCACCGACT TERM 570 425366 - 425345 - g 79 -10.1 -3.83026 | gap 1 GCGCCGGACACCAAA GCGCC-GGGC CTC ACCCAGGCGC TAAATACCAAAGATG phoA 424133 - 425548 + | alkaline phosphatase TERM 571 425563 - 425551 - f 80 -6.2 -4.86731 | opp_overlap 425551 425553 425554 GGGGCTGAAATAAAA CCGC GCCCG GCGG TGAATTTTCGCTGTC TERM 572 425553 - 425584 + F 100 -8.6 -5.63374 | opp_overlap 425551, overlap 425551 425554 GGCTGAAATAAAACC GCGCCCGGCGGTGA ATTT TCGCTGTCGGGTGG TTTTTTTGCTGTTAG TERM 573 425554 - 425583 + F 93 -12.1 -3.96398 | opp_overlap 425551, overlap 425551 425553 GCTGAAATAAAACCG CGCCCGGCGGTGA ATTT TCGCTGTCGGGTG GTTTTTTTGCTGTTA psiF 425667 - 425987 + | phosphate starvation-inducible protein PsiF TERM 574 426001 - 426034 + F 70 -7.4 -3.86944 | GATACCTGATAGTGC TAACGGGTGAGCTA CGAAAA TGGCTCACCCGAAA TTTCATACTTCTGCC TERM 575 426490 - 426512 + G 86 -12.7 -3.5241 | overlap 426498 426503 426505 TATGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 576 426498 - 426514 + G 81 -10.1 -3.87373 | overlap 426490 426503 426505 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG TERM 577 427212 - 427172 - g 95 -9.9 -4.65182 | gap 3 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC AAAAGTCATCAGGAT EcSMS35_0415 426089 - 427204 + | MASE2 domain/diguanylate cyclase proC 428030 - 427221 - | pyrroline-5-carboxylate reductase EcSMS35_0417 428150 - 428608 + | hypothetical protein TERM 578 428674 - 428690 + F 100 -5.9 -5.64421 | opp_overlap 428674 GGGATGTATTAAAAT TTTCACT TTA AGTGGAA TTTTTTCTTTACAAT aroL 428791 - 429315 + | shikimate kinase EcSMS35_0419 429365 - 429556 + | hypothetical protein aroM 429814 - 430491 + | AroM protein EcSMS35_0421 430563 - 430847 + | hypothetical protein TERM 579 430853 - 430877 + F 80 -6.3 -4.8667 | overlap 430854 430869 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATGTC TERM 580 430854 - 430876 + F 75 -9.8 -3.51279 | overlap 430853 430869 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATGT TERM 581 430869 - 430897 + F 81 -11.1 -3.56092 | overlap 430854 430853 GCCTTCCCCTTGAAC GGGAGGGCATTTT TCT GAAATGTCCTCTC TTTAACCCATAATAA EcSMS35_0422 431055 - 431333 + | hypothetical protein TERM 582 431462 - 431448 - T 83 -11.4 -3.30124 | overlap 431451 TCGTACGCCGGATAA GACGCC GCA GGCGTC GCATCCGGCATTAAA rdgC 432402 - 431491 - | recombination-associated exonuclease RdgC TERM 583 431952 - 431964 + g 77 -3.3 -5.03314 | TACGCAACAGTGCCA GCGTA TCT TCCGC TTTTTTGGCGCTGGC mak 432527 - 433435 + | manno(fructo)kinase TERM 584 433482 - 433440 - T 83 -5.5 -5.30189 | gap 1, opp_overlap 433441 433470, overlap 433441 433444 CACAAGAGTAAAAAA CCCAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC-GCG TCTTATCAGGCCTGC TERM 585 433479 - 433444 - T 72 -10.4 -2.949 | opp_overlap 433441 433470, overlap 433440 433441 AGAGTAAAAAACCCA GGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC GCGTCTTATCAGGCC araJ 434843 - 433575 - | protein araJ TERM 586 433799 - 433809 + g 77 -8.2 -4.13945 | CACCTAATAACTCTC CGCC TTT GGCG TTTTGCAGTAACAAT TERM 587 434293 - 434283 - G 74 -2.4 -5.14163 | AGCGATCAATAAAAA GGTG TAA CGCC AGCTAAATTCCTGAC TERM 588 434355 - 434396 + g 78 -9.4 -3.96337 | gap 1, opp_overlap 434363 434364 434366, overlap 434365 ATTGGCGACTGTCAT CCCGGAAACCATCCCCGCC ACGGC GGCGGTGACT-TTTCCGGG TTTGATAATTTTTGA TERM 589 434451 - 434439 - G 77 -3.3 -5.0538 | overlap 434440 434441 GCCGACGCCAAAAAA TGCGC CAT GCGGA AAGCCGGATACCAGC sbcC 438028 - 434885 - | nuclease SbcCD, C subunit TERM 590 435235 - 435249 + g 73 -11.4 -2.77962 | overlap 435234 CAACAACCTCGACTT CCAGCG CCT CGCTGG CTTTGCGCTGTAACA TERM 591 436539 - 436554 + g 85 -10.4 -4.29396 | GCCTGTAACTGCGCG CGCTGG GCTT CCAGCG TTTTGATGCGTGCTT TERM 592 437182 - 437203 + g 87 -5 -5.29445 | GTTGTGCCAGACTGA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 439227 - 438025 - | nuclease SbcCD, D subunit TERM 593 438634 - 438650 + gH 70 -6.5 -4.25104 | opp_overlap 438633 438629 438634, overlap 438612 CGTGCCAATATAAAT GTCACGC ACG GCGTCAC TTTTACTGGCACCCA TERM 594 438766 - 438780 + gH 75 -5.7 -4.67011 | overlap 438766 ATCAGTAATAGCCGC CAGCA AATGC TGCTG TTTTTCAATACCGTT EcSMS35_0428 439213 - 439344 + | hypothetical protein phoB 439417 - 440106 + | phosphate regulon transcriptional regulatory protein PhoB TERM 595 440215 - 440241 + G 82 -2.8 -5.28481 | overlap 440213 440229 GAGCTGCTACTTTGC TGCCTCCCGGCT TTC ATCCTGGGTGCA TTTTTTGGTTACCTG phoR 440164 - 441459 + | phosphate regulon sensor protein PhoR TERM 596 441486 - 441507 + T 100 -13.1 -4.88918 | opp_overlap 441489 CATCTTTTATTGCCA TAAGCCAGC CGAT GCTGGCTTA TTTTCTTTGCAGTCG TERM 597 441504 - 441489 - T 76 -10.4 -3.31144 | opp_overlap 441486 CTTTTATTGCCATAA GCCAGC CGAT GCTGGC TTATTTTCTTTGCAG EcSMS35_0431 441821 - 441672 - | hypothetical protein TERM 598 442139 - 442151 + G 72 -6.9 -4.18018 | ACGGTGTGTTACCTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 441866 - 443185 + | branched-chain amino acid transport system II carrier protein TERM 599 443207 - 443230 + F 100 -15.3 -5.64304 | opp_overlap 443210 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 443258 - 444634 + | proline-specific permease ProY TERM 600 444651 - 444679 + F 89 -14.6 -3.03338 | overlap 444641 CCTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT TERM 601 445463 - 445483 + G 70 -11.1 -2.71924 | overlap 445441 445462 TCGATCCGCAGTTTG GCGGCGACG GAG CGTTGCTGC GTTTGCGACACCATA malZ 444790 - 446607 + | maltodextrin glucosidase TERM 602 446639 - 446688 + F 78 -10.7 -3.1512 | overlap 446639 446642 ATTACGTCGTAGTCA CCAGCCCTGACACTACGCAGC GCAAAAAA GCTGCTCAATGTCAGGGCTGA GTTTGTTAAATATTT TERM 603 446639 - 446689 + F 85 -10.5 -4.27007 | gap 1, overlap 446639 446642 ATTACGTCGTAGTCA C-CAGCCCTGACACTACGCAGC GCAAAAAA GCTGCTCAATGTCAGGGCTGAG TTTGTTAAATATTTG TERM 604 446642 - 446685 + F 74 -11 -2.76539 | overlap 446639 446639 ACGTCGTAGTCACCA GCCCTGACACTACGCAGC GCAAAAAA GCTGCTCAATGTCAGGGC TGAGTTTGTTAAATA TERM 605 448174 - 448187 + G 83 -5.3 -5.10208 | AAAGATATCGCCAAT CATTC CAGC GAATG TTTTTCTTACAGTTG EcSMS35_0435 446794 - 448239 + | hypothetical protein acpH 448841 - 448260 - | [acyl-carrier-protein] phosphodiesterase TERM 606 449247 - 449231 - g 74 -10.1 -3.53091 | overlap 449240 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGTTGCTGGG TERM 607 449470 - 449450 - g 72 -4.6 -4.70659 | gap 1, opp_overlap 449456 449461, overlap 449451 449452 GTTTATAGCGAAAAA CCGGGC-GC GGTT GCAGCCCCG ACCGCTGGTCTGCAT TERM 608 449461 - 449484 + G 70 -6.6 -4.0896 | opp_overlap 449452 449450 449451, overlap 449456 449470 AAAACCGGGCGCGGT TGCAGCCCCG ACCG CTGGTCTGCA TTTTGACGAACCTTT TERM 609 449753 - 449743 - g 72 -5.4 -4.57569 | CCAGGCGGCGAAAAA CGAT CTC ATCG AACCGTTCTTTGACG queA 448934 - 450004 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 610 450122 - 450138 + G 70 -5.1 -4.33785 | overlap 450119 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 450059 - 451186 + | queuine tRNA-ribosyltransferase yajC 451209 - 451541 + | preprotein translocase, YajC subunit TERM 611 452130 - 452084 - g 73 -3.8 -4.86731 | opp_overlap 452124, overlap 452087 452088 452090 CGTTCGTAAAGAAAA CAACTACG-GCCTGAGCATCAC TTTCC GCGATGCTAAAGCTCGT-GATG AAGCCATTGCGTATC TERM 612 452663 - 452648 - g 71 -9 -3.54029 | opp_overlap 452642 452639 CTTCACCAAGGACAA CATCGG CAAA CCGATG GCGACCCTGTTTGTG secD 451569 - 453416 + | protein-export membrane protein SecD secF 453427 - 454398 + | protein-export membrane protein SecF TERM 613 454429 - 454450 + F 100 -7.9 -5.85178 | opp_overlap 454429 GTTCTGTTAAAAAAA CCGTGGCGT ATTT GCGCTGCGG TTTTTTTTGCCTGTT TERM 614 454450 - 454429 - f 79 -2.8 -5.40072 | opp_overlap 454429 GTTCTGTTAAAAAAA CCGTGGCG TATTTG CGCTGCGG TTTTTTTTGCCTGTT EcSMS35_0442 454549 - 454791 + | CC2985 family addiction module antidote protein EcSMS35_0443 454784 - 455065 + | RelE/ParE family plasmid stabilization system protein EcSMS35_0444 455153 - 455500 + | HNH endonuclease family protein TERM 615 455528 - 455508 - T 100 -11.2 -5.3236 | opp_overlap 455508 AGAAGTGATAAAAAA TGCCGGAT ATGAA ATCCGGCA TTCTCACAATTAGAA TERM 616 455508 - 455528 + T 83 -11.2 -3.33261 | opp_overlap 455508 AGAAGTGATAAAAAA TGCCGGAT ATGAA ATCCGGCA TTCTCACAATTAGAA tsx1 456422 - 455538 - | nucleoside-specific channel-forming protein Tsx TERM 617 457056 - 457099 + H 74 -7.4 -4.29396 | opp_overlap 457072, overlap 457054 457088 457089 CCGGTGTTTTCGCTC CAGGCAGAAGGTAAACCCCA CTGC TGGATTTTGCATTCAGCCTG TTTTGCTGAGTGATT TERM 618 457134 - 457179 + H 93 -11.7 -4.11216 | opp_overlap 457147, overlap 457135 CGGTTTCTTTATCCG GTGCGCCGTAAAACCCCGTCC TTCA GGGCGGGGATATAAGGCGCGG TTTTCCACCTGACCA TERM 619 457135 - 457178 + H 93 -15.2 -3.06515 | opp_overlap 457147, overlap 457134 GGTTTCTTTATCCGG TGCGCCGTAAAACCCCGTCC TTCA GGGCGGGGATATAAGGCGCG GTTTTCCACCTGACC TERM 620 457166 - 457147 - H 86 -10.6 -4.07568 | opp_overlap 457135 457134 CGGTGCGCCGTAAAA CCCCGTCC TTCA GGGCGGGG ATATAAGGCGCGGTT TERM 621 457185 - 457198 + H 70 -6.7 -4.01135 | TAAGGCGCGGTTTTC CACCT GACC AGGTG TTTGCTGTTGTTCAA TERM 622 457580 - 457590 + H 77 -4.6 -5.04249 | ACAATGCCTTCCACG CCGG ATA TCGG TTTCTTTTTTCACAG TERM 623 457913 - 457901 - g 81 -6.3 -4.82901 | GCGGGCTTACAAAAA CTTCT TCC AGAAG CGGGCTGCTTTTCCC TERM 624 457971 - 457940 - g 95 -10.2 -4.65895 | gap 1 TCCCCGATTCAAAAA GCGGGGA-CAGAATG ATG CATTCCGCTACCCGC AGGGCGTTAAGCTCG TERM 625 458259 - 458246 - g 73 -3.8 -4.83615 | overlap 458252 458254 CAGTTTTCAGAAAAA CCAG AAGACG CTGG CGAGACTTCAGCGAC EcSMS35_0448 457626 - 458834 + | IS605 family transposase orfB TERM 626 458835 - 458818 - f 70 -9.9 -2.94888 | overlap 458809 458815 AACCCACCGAAATGA TTCAGGC GACA GCCTGAA CGTAGCAGGGATCCA nrdR 459158 - 459607 + | NrdR family transcriptional regulator ribD 459611 - 460714 + | riboflavin biosynthesis protein RibD TERM 627 461227 - 461211 - g 70 -6.5 -4.17132 | overlap 461212 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACTGCGCTTGAAAT ribH 460803 - 461273 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 628 461427 - 461416 - g 70 -5.8 -4.23723 | opp_overlap 461404 461401, overlap 461406 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 629 461566 - 461539 - g 81 -6.2 -4.87665 | gap 1, opp_overlap 461539, overlap 461540 461542 GGCCAGGTAGAAAAA GC-AGTACTGCGC ATT GCGCTGTACGAGC TGTCTAAACGTAGCG TERM 630 461562 - 461542 - g 76 -11.1 -3.32986 | opp_overlap 461539, overlap 461540 461539 CAGGTAGAAAAAGCA GTACTGCGC ATT GCGCTGTAC GAGCTGTCTAAACGT nusB 461293 - 461712 + | transcription termination/antitermination factor NusB TERM 631 461719 - 461759 + F 100 -9.1 -5.43553 | gap 2, opp_overlap 461738 AAAAAGTGATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCGCGA-TC-GCCGGCC TTTTCTTTTTTACCT TERM 632 462496 - 462509 + G 70 -4.5 -4.47328 | overlap 462497 GCGCACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT thiL 461790 - 462767 + | thiamine-monophosphate kinase TERM 633 462863 - 462885 + G 78 -10.6 -3.50492 | opp_overlap 462843 462842, overlap 462864 TCGTTCCTGGCACGA TGGGATCGCT GGC AGCGATTCCG TTCTGGTATCTGATG TERM 634 462864 - 462884 + G 73 -11.9 -2.69813 | opp_overlap 462843 462842, overlap 462863 CGTTCCTGGCACGAT GGGATCGCT GGC AGCGATTCC GTTCTGGTATCTGAT pgpA 462754 - 463263 + | phosphatidylglycerophosphatase A EcSMS35_0455 464291 - 463317 - | aldo/keto reductase family oxidoreductase TERM 635 463765 - 463775 + g 86 -6.8 -4.98255 | CTGACAAACTGCGCC CAGC CGT GCTG TTTTTGTAGTTCCAG dxs 466208 - 464346 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 636 464519 - 464532 + g 78 -5.2 -4.78237 | CTCCGCTGCCTGCGC CGCC CATAAT GGCG TTTTCTTCTACGGTG TERM 637 464722 - 464735 + g 70 -4.5 -4.56775 | overlap 464723 CGCTTCACAATGCCT TTGCC AATT GGCAG TTTTTCCAGCGGCGT ispA 467132 - 466233 - | geranyltranstransferase xseB 467374 - 467132 - | exodeoxyribonuclease VII, small subunit TERM 638 467763 - 467753 - g 77 -6.8 -4.55826 | overlap 467756 CGCAAAAGATGAAAA CCAG CGT CTGG CCATTCGCGACGCCT thiI 467580 - 469028 + | thiamine biosynthesis/tRNA modification protein ThiI TERM 639 469042 - 469065 + T 100 -15.4 -3.55444 | opp_overlap 469031 AATATGTGGTTGTAA CGTCGCATCT GGTC AGATGCGACG TTTACCGCATCCGAC thiJ 469672 - 469082 - | protein ThiJ TERM 640 469547 - 469579 + gT 77 -9.1 -3.72576 | opp_overlap 469540 GCAGGTAATCGCCAG GTTACCATCGCTGGC GAC GCTGGCAGTGGTGAC TTTGATACCGCCGCG panE 470546 - 469635 - | 2-dehydropantoate 2-reductase TERM 641 470638 - 470652 + H 76 -10 -3.38135 | opp_overlap 470586 470635, overlap 470637 ACAATTAAGGGATAC GTCCTG GTG CAGGAC TGTTGGTTATTTAAC EcSMS35_0462 470714 - 471205 + | hypothetical protein EcSMS35_0463 472697 - 471333 - | major facilitator transporter TERM 642 472527 - 472511 - G 77 -6.5 -4.67234 | overlap 472512 ACGGAATCTGAAAAA CGGCCTG AGT CAGACCA TAAATACCAATGGCA TERM 643 472816 - 472834 + H 73 -10.4 -3.10493 | AGGTATGTTTATTTT GCATTCAT AAA ATGAATGC TCTATATGTTGAAAA EcSMS35_0464 472840 - 472995 + | hypothetical protein TERM 644 473659 - 473639 - g 80 -5.3 -4.99035 | overlap 473651 TGATTGACAGAAAAA CGGTTGACG ATA CGTTACCCG TGATCACGGTTACCC TERM 645 473983 - 473963 - g 74 -9.7 -3.47227 | overlap 473957 CTGTAAGGACCACAA TCGTTGCCG CAA CGGCAACCA TTAACGGCAAGGATG EcSMS35_0465 473104 - 474039 + | hypothetical protein EcSMS35_0466 474637 - 474095 - | acetyltransferase EcSMS35_0467 474932 - 474621 - | hypothetical protein TERM 646 475038 - 475062 + r 86 -13.7 -2.62396 | opp_overlap 475040 475042 475044, overlap 475040 475042 475044 TGCTCACTCTGTCAA GAGATACGGTT ATT AGCCGTATCTC TGATCTCAGACAATA TERM 647 475040 - 475060 + r 72 -10.5 -2.85351 | opp_overlap 475040 475042 475044, overlap 475038 475042 475044 CTCACTCTGTCAAGA GATACGGTT ATT AGCCGTATC TCTGATCTCAGACAA TERM 648 475103 - 475076 - R 100 -14.4 -3.50393 | opp_overlap 475083, overlap 475083 TCTGATCTCAGACAA TAAAAAAGGTGC CGTA GCACCTTTTTTA TAGAGAGGTTGTATT TERM 649 475096 - 475083 - R 100 -8.1 -5.60689 | opp_overlap 475083, overlap 475076 TCAGACAATAAAAAA GGTGC CGTA GCACC TTTTTTATAGAGAGG TERM 650 475083 - 475096 + r 91 -8.1 -5.24129 | opp_overlap 475083 475076 TCAGACAATAAAAAA GGTGC CGTA GCACC TTTTTTATAGAGAGG cyoE 476007 - 475117 - | protoheme IX farnesyltransferase TERM 651 475928 - 475908 - G 74 -9.7 -3.45386 | overlap 475896 ACAGGGGATAATCAA TGCTGCCCT TTG AGGCCAGCA GGAATCCCCCAATCA cyoD 476348 - 476019 - | cytochrome o ubiquinol oxidase, subunit IV cyoC 476962 - 476348 - | cytochrome o ubiquinol oxidase, subunit III TERM 652 476675 - 476645 - G 72 -7.5 -4.00042 | opp_overlap 476659 TCCGGCACCAAACAA CCAGGTCAACGCC AGCCA GGAGATAACCTGG CTTTTGTTGTTTTTG TERM 653 476659 - 476676 + g 100 -8.4 -5.18715 | opp_overlap 476645 ACCAGGTCAACGCCA GCCAGG AGATAA CCTGGC TTTTGTTGTTTTTGT cyoB 478943 - 476952 - | cytochrome o ubiquinol oxidase, subunit I TERM 654 476989 - 477016 + g 76 -9.2 -3.85698 | opp_overlap 476996, overlap 476997 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 655 476997 - 477008 + g 81 -5.8 -4.84529 | opp_overlap 476996, overlap 476989 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC TERM 656 477170 - 477180 + g 72 -4.6 -4.61231 | opp_overlap 477154 477155 CCGCAATGACGATAC CGGC ACC GCTG TTTTTCGGCATATGA cyoA 479912 - 478965 - | cytochrome o ubiquinol oxidase, subunit II TERM 657 480171 - 480151 - H 77 -4.9 -4.90525 | opp_overlap 480154 CAATGCGAAATAAAA CAATTATTT AAC AAATAATTA TCATTAAGGTGACAA TERM 658 480315 - 480361 + G 76 -10.5 -3.38314 | overlap 480314 AAGCGATGCTGATGT TTATTTAGCCGTAATAATTAC GGCGA GTGATTACTACAGCTAAATAA TATTTACAGATTACG EcSMS35_0473 480214 - 480357 + | hypothetical protein EcSMS35_0474 481847 - 480372 - | permease TERM 659 481508 - 481495 - G 75 -4.5 -4.81551 | GAGGCAGAGCAAAAA GCGAT CACC ACCGC CAGTGCCGCCATCCA TERM 660 481686 - 481670 - G 71 -2.9 -4.76892 | overlap 481671 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGAGAGAAGAAACCA EcSMS35_0475 482469 - 481891 - | putative lipoprotein EcSMS35_0476 482650 - 482519 - | hypothetical protein EcSMS35_0477 482774 - 483091 + | protein BolA TERM 661 483145 - 483168 + G 91 -9.6 -4.59984 | opp_overlap 483138 483150, overlap 483150 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 662 483163 - 483150 - g 95 -9.5 -4.74132 | opp_overlap 483145 483150 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 663 483150 - 483163 + G 100 -9.5 -5.23292 | opp_overlap 483150, overlap 483145 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 664 483250 - 483235 - g 90 -6.8 -5.055 | overlap 483237 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 665 483248 - 483237 - g 72 -7.2 -4.15235 | overlap 483235 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG EcSMS35_0478 483142 - 483288 + | hypothetical protein tig 483435 - 484733 + | trigger factor TERM 666 484768 - 484791 + F 100 -12.4 -5.9873 | opp_overlap 484767 484768 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA clpP 484979 - 485602 + | ATP-dependent Clp protease, proteolytic subunit ClpP clpX 485728 - 487002 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 667 487031 - 487059 + F 82 -6.7 -4.88711 | opp_overlap 487036, overlap 487036 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 668 487054 - 487036 - f 91 -8.8 -4.88407 | opp_overlap 487036 487031 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 669 487036 - 487054 + F 90 -11 -4.3623 | opp_overlap 487036, overlap 487031 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 670 487690 - 487632 - g 100 -3.8 -5.80364 | gap 2, overlap 487633 AGCTGAACAAAAAAA TTCCACCAGAAGTG-CTGA-CGTCGCTG AATAG CATCGACGATCCGGCGCGTCTGGCGGAT ACCATTGCTGCACAT TERM 671 487689 - 487633 - g 70 -7.3 -4.06592 | gap 2, overlap 487632 GCTGAACAAAAAAAT TCCACCAGAAGTG-CTGA-CGTCGCTG AATAG CATCGACGATCCGGCGCGTCTGGCGGA TACCATTGCTGCACA TERM 672 488136 - 488123 - g 77 -3.1 -5.10029 | gap 1, overlap 488113 488125 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 673 488141 - 488125 - g 82 -9.4 -4.17355 | overlap 488113 488123 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 674 488483 - 488472 - g 70 -4.4 -4.45485 | opp_overlap 488465 ATGAGATCGACAAAA TGTC TTCT GACA TGCGAGGCGATCCGG lon 487190 - 489544 + | ATP-dependent protease La TERM 675 489577 - 489606 + F 100 -8.6 -5.72616 | gap 1, opp_overlap 489577 489576 CACTAATAAAAACAG GGCTGGCAGG-CT AATTC GGACTTGCCAGCC TTTTTTTGTCTCGCT hupB 489753 - 490025 + | DNA-binding protein HU-beta TERM 676 490061 - 490080 + F 100 -10 -5.73978 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTAAT TERM 677 492006 - 491975 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ppiD 490217 - 492088 + | peptidylprolyl isomerase TERM 678 492131 - 492158 + F 75 -10.6 -2.93447 | opp_overlap 492132 492137, overlap 492137 TTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 679 492157 - 492132 - f 89 -11.9 -3.63515 | opp_overlap 492131 492137, overlap 492137 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 680 492137 - 492152 + F 79 -8.2 -4.39571 | opp_overlap 492132 492137, overlap 492131 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 681 492152 - 492137 - f 81 -6 -4.89477 | opp_overlap 492137 492131, overlap 492132 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA EcSMS35_0485 492239 - 492610 + | competence protein ComEA TERM 682 492669 - 492647 - f 76 -10.7 -3.12351 | opp_overlap 492642 492647 492649 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAGT TERM 683 492647 - 492669 + F 75 -10.7 -2.96452 | opp_overlap 492647, overlap 492642 492649 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAGT EcSMS35_0486 492716 - 493114 + | thioesterase family protein queC 493861 - 493166 - | queuosine biosynthesis protein QueC TERM 684 493490 - 493516 + g 72 -7.3 -4.21194 | gap 1 GGAGAAATCCGTTTC GCAGACGCCGGT AATC ACCG-CTTCTGC TTTTACCTGATACGC TERM 685 493901 - 493887 - R 91 -8.6 -4.89477 | GCTTGAACAATAAAA GCGTTA TGG TAACGC CTGCGATTAACCCGG EcSMS35_0488 495626 - 493926 - | solute-binding family 5 protein TERM 686 494274 - 494292 + g 79 -2.2 -5.1925 | overlap 494275 494276 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 687 495215 - 495174 - G 74 -8.1 -4.09685 | gap 2, opp_overlap 495205, overlap 495176 GGTCAGGCCGGAAAA TATCTGCCCGGCCAGATGC TGCTCG GCA-C-GGCCGGGCAAAAA GCCCGGTTGTAGCGG TERM 688 495213 - 495176 - G 81 -10.7 -3.64716 | gap 2, opp_overlap 495205, overlap 495174 TCAGGCCGGAAAATA TCTGCCCGGCCAGATGC TGCTCG GCA-C-GGCCGGGCAAA AAGCCCGGTTGTAGC TERM 689 495205 - 495221 + g 76 -10.8 -3.33261 | opp_overlap 495176 495174 495216 495218 TGCTGCTCGGCACGG CCGGGC AAAAA GCCCGG TTGTAGCGGTTCGAG TERM 690 496149 - 496138 - g 95 -5.8 -5.44119 | overlap 496139 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 495726 - 496544 + | hydrolase Cof TERM 691 496562 - 496577 + F 100 -11.8 -5.86332 | AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTTGCGTTGA TERM 692 496684 - 496670 - f 71 -4.3 -4.6008 | AAAATAGAATTAAAA GAGAA AAAAA TTCTC TGTGGAAGGGCTATG TERM 693 496888 - 496875 - g 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG EcSMS35_0490 496697 - 497155 + | AsnC family transcriptional regulator mdlA 497185 - 498957 + | multidrug resistance, ATP-binding protein mdlA mdlB 498950 - 500731 + | multidrug ABC transporter, permease/ATP-binding protein TERM 694 500768 - 500791 + T 90 -8.9 -4.68645 | opp_overlap 500768 500763 GGTGCAATAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC EcSMS35_0493 500885 - 500745 - | hypothetical protein glnK 500912 - 501250 + | nitrogen regulatory protein P-II 2 TERM 695 501422 - 501435 + G 70 -5.9 -4.15453 | overlap 501433 TGTTTATGACTATTC CGGGG ATTG CCCTG TTTTACGGTGGGTTG amt 501280 - 502566 + | ammonium transporter TERM 696 502609 - 502583 - T 93 -9.5 -5.07053 | gap 1, opp_overlap 502583 502585, overlap 502585 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 697 502583 - 502609 + T 100 -7.3 -5.68023 | gap 1, opp_overlap 502583 502585, overlap 502585 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 698 502585 - 502607 + T 89 -9.9 -4.46828 | gap 1, opp_overlap 502583 502585, overlap 502583 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT TERM 699 502607 - 502585 - T 84 -9.9 -4.15748 | gap 1, opp_overlap 502585 502583, overlap 502583 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT tesB 503475 - 502615 - | acyl-CoA thioesterase II TERM 700 503505 - 503495 - H 72 -6.8 -4.24342 | overlap 503496 CTCTCCAGTAACAAA GCTG CCG CAGC AAGCCAAAGTGAGTT EcSMS35_0497 503693 - 504265 + | putative lipoprotein TERM 701 504272 - 504299 + T 89 -15 -2.71364 | opp_overlap 504266 504276, overlap 504276 CAATATTAAGCGCAG TTAACCCTCTCC GCCC GGAGAGGGTTAG TAGTTCCAGCGATAA TERM 702 504295 - 504276 - T 87 -13.6 -3.08173 | opp_overlap 504272 504276, overlap 504266 ATTAAGCGCAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG TERM 703 504276 - 504295 + T 93 -13.6 -3.27298 | opp_overlap 504276 504266, overlap 504272 ATTAAGCGCAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG EcSMS35_0498 504607 - 504296 - | methylated-DNA-[protein]-cysteine S-methyltransferase EcSMS35_0499 504986 - 505339 + | hypothetical protein EcSMS35_0500 506930 - 505380 - | cyclic diguanylate phosphodiesterase domain-containing protein TERM 704 505798 - 505816 + g 80 -5.2 -5.02074 | TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA EcSMS35_0501 507564 - 507094 - | hypothetical protein TERM 705 507205 - 507191 - G 77 -11.4 -3.13403 | opp_overlap 507182, overlap 507189 TGTTCTTTATGAACA TCCGCG ACA CGCGGA GAGTTCAAGATGGCT maa 508231 - 507680 - | maltose O-acetyltransferase EcSMS35_0503 508621 - 508403 - | haemolysin expression modulating protein EcSMS35_0504 509021 - 508647 - | hypothetical protein TERM 706 509532 - 509547 + r 83 -11.8 -3.27476 | opp_overlap 509532 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT TERM 707 509547 - 509532 - R 100 -11.8 -5.28176 | opp_overlap 509532 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT EcSMS35_0505 512716 - 509567 - | acriflavine resistance protein B TERM 708 510887 - 510908 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 709 512590 - 512629 + g 100 -15.8 -3.57144 | AGGCGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 513968 - 512739 - | acriflavine resistance protein A TERM 710 513903 - 513921 + g 93 -6 -5.17744 | opp_overlap 513899 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 514074 - 514721 + | transcriptional regulator AcrR TERM 711 515144 - 515131 - g 70 -3.7 -4.62783 | overlap 515114 515133 CAGCTACGGCAAAAA GTCGC TGAA GCGCC GGAAAAAATGCGTCA TERM 712 515169 - 515153 - g 74 -3 -5.01732 | gap 1, overlap 515133 AAGCGCCGGAAAAAA TGC-GTC AGGC GACCGCA GCGTTAACAGCACTT TERM 713 516685 - 516675 - g 93 -8.2 -4.83169 | AGTGTTGGAGAAAAA CGGC GTT GCCG TGCGTCACTTCGGCA kefA 514849 - 518211 + | potassium efflux system KefA EcSMS35_0509 518584 - 518423 - | hypothetical protein TERM 714 518593 - 518622 + r 72 -5.7 -4.4595 | gap 1, overlap 518596 518597 GTGACATACTTTCTC CATTGCTAGCGGGT TAA ACGCGCTAGCC-TG TTTTCGATTTTATCC TERM 715 518596 - 518620 + r 75 -8.5 -3.8221 | overlap 518593 518597 ACATACTTTCTCCAT TGCTAGCGGGT TAA ACGCGCTAGCC TGTTTTCGATTTTAT TERM 716 518597 - 518619 + r 80 -12 -2.87699 | overlap 518596 518593 CATACTTTCTCCATT GCTAGCGGGT TAA ACGCGCTAGC CTGTTTTCGATTTTA priC 519125 - 518598 - | primosomal replication protein N'' TERM 717 519035 - 519014 - G 70 -4.3 -4.57073 | overlap 519015 519029 CACGGGTCTGAAAAA GGTGCCTGT CAAA ACGGGCACT TAGCGTGGCAAATTG EcSMS35_0511 519195 - 519572 + | hypothetical protein apt 519725 - 520276 + | adenine phosphoribosyltransferase TERM 718 520328 - 520352 + F 71 -9.9 -3.09492 | opp_overlap 520277, overlap 520328 520330 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 719 520587 - 520559 - g 72 -5.2 -4.56597 | gap 1 GTGGCGTCGGAAAAA CCTCTATCGCCCG ACTG CTGGCGA-AGGGG CTAAACTGCGAAACC TERM 720 521647 - 521627 - g 74 -10.4 -3.53224 | overlap 521628 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 721 521728 - 521701 - g 76 -10.5 -3.36112 | gap 1 GCAAAAAAGAGTGAA CCGGCAGC-CGC TACCC GCGCGCGGCCGG TGAATAACGCTGCGC TERM 722 521885 - 521869 - g 75 -4.3 -4.7497 | overlap 521872 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTGAAAAA TERM 723 521882 - 521872 - g 77 -6.8 -4.4831 | overlap 521869 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTGAA TERM 724 521937 - 521921 - g 93 -6.5 -5.27779 | TGGAACATGAAAAAA CGCCG GAACTGG CGGCG AAGCTGGCGGCAGAA TERM 725 522082 - 522040 - g 71 -9.1 -3.56594 | opp_overlap 522049 522055 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 726 522252 - 522235 - g 95 -6.9 -5.17744 | opp_overlap 522232 522235 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 520405 - 522336 + | DNA polymerase III, tau subunit TERM 727 522338 - 522354 + F 78 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC TERM 728 522462 - 522450 - g 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA EcSMS35_0514 522389 - 522718 + | hypothetical protein TERM 729 522798 - 522754 - g 72 -10.6 -3.07622 | gap 1, overlap 522744 522757 ACACAGCTTATGGAA GCACTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 730 522795 - 522757 - g 81 -13.1 -2.75382 | gap 1, overlap 522754 CAGCTTATGGAAGCA CTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 731 523138 - 523127 - g 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAATC recR 522718 - 523323 + | recombination protein RecR TERM 732 523323 - 523358 + F 72 -10.4 -2.90804 | opp_overlap 523314 523329, overlap 523322 523332 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG ATCA CCTGCTCTCGCTTGAA ATTATTCTCCCTTGT TERM 733 523352 - 523329 - f 100 -16.8 -3.90112 | opp_overlap 523323 523322 523332, overlap 523314 TCGTTTTTAAGCAAA CGAGAGCAGG ATCA CCTGCTCTCG CTTGAAATTATTCTC TERM 734 523332 - 523349 + F 77 -11.3 -2.55818 | opp_overlap 523329, overlap 523323 523322 TTTTTAAGCAAACGA GAGCAGG ATCA CCTGCTC TCGCTTGAAATTATT TERM 735 523894 - 523874 - g 77 -6.2 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAA TGGCG TCTTCTGG GAATCGGCTGGCGAA TERM 736 524559 - 524543 - g 81 -7.3 -4.60487 | overlap 524545 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 737 524557 - 524545 - g 72 -7.7 -3.91506 | overlap 524543 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 523433 - 525307 + | chaperone protein HtpG TERM 738 525313 - 525340 + TF 100 -15.7 -5.50723 | GGTTTCCTGATGTCA TGCCGGATGAC CTTTGT GTCATCCGGCA TTTTTCTTTTCATCA EcSMS35_0517 525498 - 525373 - | hypothetical protein adk 525488 - 526132 + | adenylate kinase hemH 526264 - 527226 + | ferrochelatase aes 528182 - 527223 - | acetyl esterase TERM 739 527251 - 527275 + g 70 -5.7 -4.3129 | gap 1, opp_overlap 527248, overlap 527249 GTAAAGAACTGAGCG CCGTCG-CGA AGAGCC TCGTCGGCGG TTTTCATCATCCGTG TERM 740 529265 - 529244 - g 78 -7.9 -4.37198 | opp_overlap 529244 529251, overlap 529248 AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG TGCTATAGCGGAATT gsk 528334 - 529638 + | inosine kinase TERM 741 529656 - 529687 + T 84 -8.6 -4.3586 | opp_overlap 529666 529667, overlap 529657 529666 529667 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTTGCTCTCAATGC TERM 742 529657 - 529686 + T 83 -12.1 -3.21034 | opp_overlap 529666 529667, overlap 529656 529666 529667 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTTGCTCTCAATG EcSMS35_0522 531444 - 529768 - | monovalent cation:proton antiporter-2 family protein TERM 743 531678 - 531646 - R 86 -10.6 -4.13945 | opp_overlap 531636, overlap 531649 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 744 531675 - 531649 - R 93 -15.3 -3.09831 | opp_overlap 531636, overlap 531646 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT fsr 532902 - 531682 - | fosmidomycin resistance protein TERM 745 532000 - 531988 - G 81 -10.5 -3.66424 | TAAAATCAGCGTAAA CGGCG CAA CGCCG AGGATAGAGCCCCAA TERM 746 532587 - 532568 - G 74 -7.8 -4.10007 | AGAACTGCGCCAAAA CTGCCCGC CAGC GCAAGCAG CACCAGACCACTTAA TERM 747 532868 - 532883 + g 72 -6.8 -4.23045 | gap 1, overlap 532867 532868 GTTGACGCAGCCGCG CCC-GCC ACA GGCTGGG TTTGTTCACTCATTG ushA 533120 - 534772 + | UDP-sugar hydrolase/5'-nucleotidase TERM 748 534803 - 534780 - T 100 -13.2 -3.67976 | opp_overlap 534773 534778 534776, overlap 534773 GGCAGTAATCCGAAA GTGCCGGATA TTTG CATCCGGCAC AATGCTTAATCGCGG EcSMS35_0525 535288 - 534809 - | YbaK/EbsC protein TERM 749 534947 - 534958 + g 79 -2.2 -5.24129 | GGGGGCGTCGATAAT CGTT GGCA GACG TTTTTTCTGCCCCAG TERM 750 535133 - 535149 + g 78 -8 -4.3898 | TTTCATATCACCGTT CACTGC GACCA GCAGTG TTTTGTAGACCTGAT TERM 751 535465 - 535486 + r 95 -7.3 -5.40072 | overlap 535466 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 752 535466 - 535485 + r 85 -10.8 -3.83561 | overlap 535465 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA EcSMS35_0526 536286 - 535492 - | GumN family protein TERM 753 536088 - 536107 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG TERM 754 536465 - 536515 + r 93 -11.8 -3.86897 | overlap 536455 GATGCGACGCTTACG CGTCTTATCAGGCCTACAACCCTG TGC CTGAATCGTAGGCCGGATAAGGCG TTTATGCCGCATCCG copA 539094 - 536590 - | copper-exporting ATPase TERM 755 538077 - 538090 + g 91 -3.1 -5.47399 | gap 1, opp_overlap 538064, overlap 538077 538078 TACCTGGCTGAACAT C-TGCC AGC GGCACG TTTTTTTCACCTTCG TERM 756 539298 - 539286 - H 71 -7.7 -3.75153 | overlap 539289 GGGTGCTAAGTTAAA TCAGG ATG CCTGA AAATCGGCACCGGGG glsA1 539357 - 540289 + | glutaminase EcSMS35_0529 540292 - 541584 + | amino acid permease family protein TERM 757 541752 - 541734 - g 73 -3.8 -4.7497 | GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCAATCCGCTTCTA cueR 541709 - 542116 + | Cu(I)-responsive transcriptional regulator EcSMS35_0531 542287 - 542120 - | hypothetical protein EcSMS35_0532 542742 - 542320 - | putative lipoprotein TERM 758 542545 - 542557 + g 75 -5.5 -4.67353 | CGCCTGGGCATGTTG TGCGG CTT CTGCA TTTTTAAATGCCTGC EcSMS35_0533 543812 - 542796 - | hypothetical protein EcSMS35_0534 544032 - 543910 - | hypothetical protein EcSMS35_0535 544057 - 544185 + | hypothetical protein EcSMS35_0536 544178 - 544540 + | hypothetical protein EcSMS35_0537 545101 - 544643 - | nodulation efficiency family protein EcSMS35_0538 546015 - 545098 - | SPFH domain-containing protein/band 7 family protein EcSMS35_0539 546161 - 546838 + | ABC transporter, ATP-binding protein EcSMS35_0540 546825 - 547604 + | hypothetical protein ybbN 548638 - 547784 - | protein YbbN EcSMS35_0542 549469 - 548699 - | short chain dehydrogenase/reductase family oxidoreductase tesA 550121 - 549498 - | acyl-CoA thioesterase I TERM 759 550058 - 550038 - GH 79 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCA GCGG-CACG GAAGGTTAACAGGAC TERM 760 550339 - 550368 + GH 72 -4.3 -4.72386 | gap 1, opp_overlap 550333 550332 ACGAAGAAGCGCGGG CAAAG-TTGCGCGC GAA GCACGTAGGCTTTG TTTTTCAGTCATTTA TERM 761 550651 - 550612 - gH 74 -10.9 -2.56596 | gap 1, opp_overlap 550597, overlap 550608 TTGCCGACGAACCCA CCGGCAATCTTGACCGCC AGACG GGCGAT-AAAATTGCCGA CCTGCTGTTTTCCCT EcSMS35_0544 550092 - 550778 + | ABC transporter, ATP-binding protein TERM 762 551255 - 551265 + G 77 -8.2 -4.11484 | opp_overlap 551255 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAACCCCTTCCA TERM 763 553098 - 553112 + G 73 -11.4 -2.68532 | overlap 553090 GGATTGTGCTGCCGT GCAGCG GTG CGCTGC TGCTGTCGCTTTGCG EcSMS35_0545 550775 - 553189 + | efflux ABC transporter, permease protein TERM 764 553300 - 553271 - T 80 -10.7 -3.30124 | overlap 553248 553256 553272 CCGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACAGC GTGCACAGAATACCG TERM 765 553300 - 553272 - T 79 -11.8 -2.57931 | gap 1, overlap 553248 553256 553271 CGTAGGCCGGATAAG GC-GTTCACGCCG CATC CGGCATGAACAGC GTGCACAGAATACCG selU 554414 - 553320 - | tRNA 2-selenouridine synthase TERM 766 553794 - 553807 + g 72 -4.5 -4.70879 | CCACAGGCGCAAATT CTGAC GGGC GTCGG TTTTTAGCATTTCGG EcSMS35_0547 555409 - 554483 - | LysR family transcriptional regulator TERM 767 555431 - 555446 + H 71 -4 -4.82819 | gap 1, opp_overlap 555431, overlap 555433 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG allA 555639 - 556121 + | ureidoglycolate hydrolase allR 556244 - 557014 + | transcriptional regulator AllR TERM 768 557027 - 557044 + F 100 -12.7 -5.40474 | TAGTGTCTGTCGCAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT TERM 769 558088 - 558073 - g 77 -10.4 -3.59979 | opp_overlap 558073 GTCTCTGATGCTAAA GCAGCG CTGA CGCTGC TGGTTGAAGTGGCGC gcl 557104 - 558885 + | glyoxylate carboligase hyi 558898 - 559674 + | hydroxypyruvate isomerase EcSMS35_0552 559774 - 560652 + | 2-hydroxy-3-oxopropionate reductase TERM 770 560695 - 560668 - f 93 -9.3 -5.07486 | gap 1 TACCCGCAATAAAAA TGGCCGATATCA GAAAA TGA-ATCGGCCA GCAATATTAAAAAAA TERM 771 560737 - 560750 + F 89 -2.5 -5.67711 | overlap 560737 560740 AAGATGTTGCTTCAG TATTA AAAA TAATA TTTTTATTTTATTTG TERM 772 560740 - 560756 + F 79 -5.3 -5.12172 | overlap 560737 560737 ATGTTGCTTCAGTAT TAAAAAT AAT ATTTTTA TTTTATTTGTTCCTC TERM 773 561604 - 561580 - g 72 -7.1 -4.1899 | CGACTTTACGCAAAA CGCCCACTC GTTTCGT GAGCAGGCG CTGGGGCAAACGCTG EcSMS35_0553 560822 - 562276 + | cytosine/purines/uracil/thiamine/allantoin family permease TERM 774 562597 - 562583 - g 90 -10 -4.30576 | CGCGCAGCAGCAAAA GGTGGT ATC ACCACC ATGATCGAAATGCCG TERM 775 563480 - 563468 - g 72 -4.7 -4.72272 | GGTCTGCAGCAAAAA GGCCG TAT CGCCC CAGGAAAAGATGCCG allB 562337 - 563698 + | allantoinase TERM 776 563712 - 563732 + F 76 -10.4 -3.36671 | AATCTGGCCCTGCAA TGCCCGTC CTTGT GGCGGGCA TTCTCCGGTTAAGGT TERM 777 563774 - 563804 + F 100 -6.9 -5.63012 | gap 1, opp_overlap 563782 563783 CAATTTTGCAGTGGG CCGC-GAAAGCCTG TTAT CAGGATTTCAGTGG TTTTTCTTTATTTTT EcSMS35_0556 564855 - 565067 + | IS1 transposase orfA EcSMS35_0557 565078 - 565581 + | IS1 transposase orfB TERM 778 566175 - 566185 + G 72 -6.8 -4.25104 | AAGCGTAATCCGTTG CTGG CCT CCAG TTTTGGTACGGGGGA TERM 779 566318 - 566352 + G 70 -10.7 -2.72144 | gap 1, overlap 566317 TGTGCGTTTCCTTGA TGCCGACGGTCAGCCG CTGG CGGCTAACGG-CGGCA ATTTAGCGCGGGTGG EcSMS35_0559 565854 - 566999 + | glycerate kinase TERM 780 567039 - 567014 - T 89 -11.9 -3.58522 | opp_overlap 567015, overlap 567015 ACTATTACCTTTAAA GCGGATGCGAT TTAT ATCGCATCCGT TTTTTACCTGAATTT TERM 781 567038 - 567015 - T 93 -15.4 -2.74792 | opp_overlap 567015, overlap 567014 CTATTACCTTTAAAG CGGATGCGAT TTAT ATCGCATCCG TTTTTTACCTGAATT TERM 782 567015 - 567038 + T 100 -15.4 -5.10497 | opp_overlap 567015 567014 CTATTACCTTTAAAG CGGATGCGAT TTAT ATCGCATCCG TTTTTTACCTGAATT TERM 783 567086 - 567067 - T 100 -10.7 -5.44119 | TTTACCGCAAAAAAA GCCACGG AATAAA CCGTGGC AAAATCCAACATAGC EcSMS35_0560 567914 - 567129 - | hypothetical protein allC 569160 - 567925 - | allantoate amidohydrolase TERM 784 569090 - 569075 - G 70 -6.1 -4.21141 | opp_overlap 569075 GGCGAATAAAGTAAA CGGGT CATTCC ACCCG TTGGGTCAGAGCCAA allD 570231 - 569182 - | ureidoglycolate dehydrogenase TERM 785 570312 - 570289 - H 70 -6.1 -4.27861 | overlap 570291 AACATACAGGGAAAA TATCTGGAT TATGTG ATCCAGACA GGCAAAAAAATATAG TERM 786 571040 - 571029 - g 75 -7.2 -4.30448 | AAATCCAACTTAAAA CCCG CGCG CGGG AAAAAGGCTTGCTGG TERM 787 571389 - 571402 + G 75 -4.5 -4.78149 | opp_overlap 571389 AAGCAACTGGCAAAC CGACG GTGG CGTTG TTTTTAGGTTATACC EcSMS35_0563 570548 - 572215 + | acyl-CoA synthetase EcSMS35_0564 572225 - 573484 + | hypothetical protein TERM 788 574063 - 574073 + G 74 -2.4 -5.1615 | CTTTAGATGCGCGCT CCGG TCG CCCG TTTTTTGCCTGTTCC EcSMS35_0565 573495 - 574310 + | hypothetical protein TERM 789 574638 - 574654 + G 82 -7.9 -4.56597 | CGCGCATTGAGGTTT CGCCTGA TGA TCCGGCG TTTTTGCAGCCAGAG arcC 574307 - 575200 + | carbamate kinase purK 576500 - 575433 - | phosphoribosylaminoimidazole carboxylase, ATPase subunit purE 577006 - 576497 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit lpxH 577845 - 577123 - | UDP-2,3-diacylglucosamine hydrolase TERM 790 577618 - 577604 - G 74 -6.4 -4.46212 | TTGCCGAGCAGAAAA TCACGG TTG CCATGA ATGAAATAACAGGGA TERM 791 577810 - 577775 - G 100 -12.7 -5.00616 | gap 1, opp_overlap 577784 TCCCCCGCTAAAAAA CGCAGAA-AACCGGCG GTGAT CGCCGGTTCTTCCACG CAGAGATGAAGATCT TERM 792 577784 - 577800 + g 85 -11.5 -3.61398 | opp_overlap 577775 AAAAAACGCAGAAAA CCGGCGG TGA TCGCCGG TTCTTCCACGCAGAG ppiB 578342 - 577848 - | peptidylprolyl isomerase TERM 793 578099 - 578109 + g 72 -5.4 -4.58283 | GGGCCATTGCCAGCG TACC ACG GGTA TTTTTCAGACCGTTA cysS 578516 - 579901 + | cysteinyl tRNA synthetase TERM 794 579913 - 579936 + T 100 -16.8 -3.46602 | GTAATTGCGCTATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA EcSMS35_0572 580458 - 579937 - | hypothetical protein TERM 795 580315 - 580299 - G 71 -2.9 -4.77036 | opp_overlap 580301, overlap 580300 CGCGATGACCAAAAA TGTTGCC GTA AGCAACG CCAAATTTAAACGAT TERM 796 580557 - 580536 - R 100 -15.9 -3.95836 | AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GAAAGGGATCAGGCA EcSMS35_0573 580778 - 580566 - | hypothetical protein folD 581646 - 580780 - | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 797 580811 - 580825 + g 72 -7.1 -4.18494 | opp_overlap 580809 580813 TCATGATATTCAACG CACGC CTGTA GCGTG TTTTCAATCAGCGTG TERM 798 581045 - 581062 + g 70 -4.1 -4.72272 | AGTAGATCGGCATTT TCTACGT GGTG ACGCAGA TTTTTAGTGAAACGG TERM 799 581787 - 581797 + H 71 -4 -4.75372 | CACCGTCGCTGAGAT TGAA AGC TTCA TTTTTCGTCCATGAT TERM 800 582286 - 582298 + G 70 -6.3 -4.23723 | GTCACACTCGGTCAA TATCG TAC CGATA TTTTCAATGCTGTTG EcSMS35_0575 582118 - 582660 + | type-1 fimbrial protein EcSMS35_0576 582879 - 583571 + | chaperone protein FimC-like protein TERM 801 585739 - 585729 - g 72 -8.2 -3.73072 | AATGTTTTGATTAAA GCGC CAG GCGC AGGAGGTGTACGCAT sfmD 583602 - 586211 + | outer membrane usher protein SfmD EcSMS35_0578 586224 - 587231 + | mannose binding protein FimH-like protein EcSMS35_0579 587560 - 587757 + | fimbrial protein fimZ 588392 - 587760 - | fimbriae Z protein TERM 802 588477 - 588500 + G 73 -9.6 -3.59262 | overlap 588481 CGGGTTTTCTTGATT CAGACGCGCA GCGG TGTGCGTTTG TTTGCCGCTATAACG TERM 803 588481 - 588496 + G 75 -6.8 -4.43208 | overlap 588477 TTTTCTTGATTCAGA CGCGCA GCGG TGTGCG TTTGTTTGCCGCTAT EcSMS35_0581 588446 - 588601 + | hypothetical protein TERM 804 588636 - 588606 - T 79 -11.8 -2.60079 | overlap 588616 TGACCGTATAATTCA CGCGATTACACCGC ATT GCGGTATCAACGCG CCCTTAGCTCAGTTG EcSMS35_0583 589517 - 588756 - | AraC family transcriptional regulator TERM 805 589691 - 589661 - R 91 -11.2 -3.727 | opp_overlap 589673, overlap 589663 CTGACGAGAGCGAAA GAGGTAAGCCAGGT CGT ACCCGACTTACCTG GAGGAGATTTAATAC TERM 806 589689 - 589663 - R 100 -13.8 -3.44487 | opp_overlap 589673, overlap 589661 GACGAGAGCGAAAGA GGTAAGCCAGGT CGT ACCCGACTTACC TGGAGGAGATTTAAT EcSMS35_0584 590590 - 589700 - | hypothetical protein TERM 807 590309 - 590297 - G 82 -3.3 -5.24129 | CTGGTGCATAAAAAA TTCCG GAT CGGCA TTCAGCCCGACAATC EcSMS35_0585 593563 - 590591 - | bacteriophage N4 adsorption protein A precursor TERM 808 592674 - 592648 - G 76 -12.2 -2.59683 | opp_overlap 592648 592644 592649 592667, overlap 592647 ACTGTACCGTATAAT TCGCCAACGCCG GAA CGGGGTTGGCGC TGTATTTAGATAACA TERM 809 592648 - 592674 + g 81 -12.2 -3.27408 | opp_overlap 592647 592648, overlap 592644 592649 592667 ACTGTACCGTATAAT TCGCCAACGCCG GAA CGGGGTTGGCGC TGTATTTAGATAACA TERM 810 592649 - 592673 + g 95 -15.7 -2.56124 | opp_overlap 592648 592647, overlap 592648 592644 592667 CTGTACCGTATAATT CGCCAACGCCG GAA CGGGGTTGGCG CTGTATTTAGATAAC TERM 811 593127 - 593137 + g 81 -6.8 -4.72272 | overlap 593118 CGCAGGGTCGGCGCA GCGT CGC ACGC TTTTTGCTGGGCAAG TERM 812 593448 - 593433 - G 79 -4 -5.05116 | gap 1, opp_overlap 593446, overlap 593435 GGATAAATAACAAAA TG-GCGA TAA TCGCTCA GCCCCAGCTCTTCTG nfrB 595787 - 593550 - | bacteriophage N4 adsorption protein B TERM 813 594495 - 594467 - G 78 -7.4 -4.4009 | gap 1 GGTTACCCCAGAAAA GACGCAGG-ACAG ATAG CAGCCCCTGCGTC AGACCGTAGTAGCCA TERM 814 594675 - 594659 - G 72 -5.1 -4.44797 | overlap 594651 CCAGTAACAGCAAAA GCTGG ATCATCA CCAGC ATCGCGAGGAAGCTG TERM 815 595094 - 595066 - G 71 -9.6 -3.53012 | gap 1, opp_overlap 595093, overlap 595068 GCGCGGCGGCTGAAA CAGGTGCCGA-CG CCTG CGCTGGGCACCTG TCCGGCGAGGGCTTC cusS 597379 - 595937 - | sensor kinase CusS cusR 598052 - 597369 - | transcriptional regulatory protein CusR TERM 816 598114 - 598135 + GH 75 -6.7 -4.34402 | opp_overlap 598122, overlap 598113 ATGGCAATCGCTTAT TGGCAAAAT GACA ATTTTGTCA TTTTCCTGTCACCGG EcSMS35_0589 598099 - 598254 + | hypothetical protein TERM 817 599575 - 599563 - gf 72 -10.5 -2.8806 | AAATTTCTTTATATA CCGCC TTA GGCGG CGGTTGGCAGCAATA cusC 598209 - 599591 + | cation efflux system protein CusC cusF 599615 - 599947 + | cation efflux system protein CusF cusB 599963 - 601186 + | cation efflux system protein CusB TERM 818 601223 - 601235 + G 70 -4.8 -4.49311 | overlap 601213 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTCTGGTGCTGAT TERM 819 602998 - 602972 - g 76 -3.6 -5.02074 | GCATGCTGCAAAAAA CCGACAAGCTGA TTA TGAGCGTACCGG AAGTGGCGCGGGTAT cusA 601198 - 604341 + | cation efflux system protein cusA pheP 604443 - 605819 + | phenylalanine-specific permease TERM 820 605851 - 605877 + T 100 -16.7 -5.65513 | opp_overlap 605849 605848 605846 CCGACAAAACGATGT CCGCTCTCATC CATGC GATGAGAGCGG TTTTTTTAATTACTG EcSMS35_0595 607134 - 605887 - | small conductance mechanosensitive ion channel (MscS) family protein TERM 821 607234 - 607213 - R 87 -11.5 -3.61103 | overlap 607215 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GAGAGAATTACACTT TERM 822 607232 - 607215 - R 100 -14.1 -3.38224 | overlap 607213 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGAGAGAATTACAC nfnB 607895 - 607242 - | oxygen-insensitive NAD(P)H nitroreductase EcSMS35_0597 608357 - 607974 - | hypothetical protein EcSMS35_0598 608670 - 608422 - | putative lipoprotein EcSMS35_0599 609854 - 608736 - | putative carboxylate-amine ligase ybdK TERM 823 609426 - 609413 - G 70 -4.5 -4.49556 | CGTGCAGCAAATAAA TGGCA TCAT CGCCA CTGGCGCAACCAACA EcSMS35_0600 610296 - 610448 + | Hok/Gef family protein TERM 824 610449 - 610480 + T 74 -10.8 -2.59564 | opp_overlap 610448, overlap 610449 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GCAA TCCCCGCATATCCG GTTGTCAGGTCAGGA TERM 825 610449 - 610481 + T 80 -10.6 -3.32963 | gap 1, opp_overlap 610448, overlap 610449 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GCAA TCCCCGCATATCCGG TTGTCAGGTCAGGAT entD 611190 - 610570 - | 4'-phosphopantetheinyl transferase entD TERM 826 611334 - 611305 - RH 100 -14.3 -3.30124 | TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACGAC GCGCACTTTGTCAAC fepA 613605 - 611365 - | ferrienterobactin receptor TERM 827 611728 - 611759 + gH 77 -2.9 -5.11836 | gap 1, overlap 611731 TGAGTTCAACGTATA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 828 612930 - 612947 + gH 75 -6.9 -4.4017 | GGCCCTGGTTGATAT CCCACGC GTCA GCCTGGG TTTTGTCGAGGTTGC TERM 829 613072 - 613095 + gH 82 -3.1 -5.19212 | gap 1, overlap 613072 613075 GAAATAAGCATCCCA GG-AGCCGTG CCACT CACCGCTGCC TTTTTTGGTAATGAT TERM 830 613410 - 613423 + gH 70 -3.7 -4.64657 | TAATCTCCGATACAT CGCGG GCAA CCGGG TTTTTGCGGATTTCA EcSMS35_0603 613598 - 613729 + | hypothetical protein TERM 831 614113 - 614123 + G 72 -6.8 -4.24342 | ATGCCAACTGGCGCG GCAG CTA CTGC TTTATTCCTACCGAA fes 613848 - 615050 + | enterochelin esterase EcSMS35_0605 615053 - 615271 + | mbtH-like protein TERM 832 616474 - 616462 - g 82 -9.1 -4.1711 | opp_overlap 616470, overlap 616465 ATCATCGCCAATAAA CAGCG TTA CGCTG AGCCAACGTTAATCC TERM 833 616686 - 616670 - g 95 -10.1 -4.64144 | opp_overlap 616669, overlap 616661 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGTTGATGCGCGT TERM 834 617345 - 617364 + G 76 -7.8 -4.2123 | opp_overlap 617333 CGACCACGCACTTTG TGCCGTCG ATGC TGGCGGCA TTTGTTGCATCGCTG TERM 835 618484 - 618494 + G 78 -8.2 -4.18762 | CTGTTTTGTTTCCAT CCGG CCT CCGG TTTTGCCTGGCAGTT entF 615268 - 619149 + | enterobactin synthetase component F TERM 836 619162 - 619201 + F 82 -7.6 -4.65182 | gap 1, opp_overlap 619168, overlap 619162 619164 619168 TAAATTAATATTATC T-ATAAACCCATAATTA CAGGAAA TAATTATGGGTTTATCA TTTATTTAATTTATA TERM 837 619162 - 619200 + F 71 -9.2 -3.37482 | opp_overlap 619168, overlap 619162 619164 619168 TAAATTAATATTATC TATAAACCCATAATTA CAGGAAA TAATTATGGGTTTATC ATTTATTTAATTTAT TERM 838 619164 - 619198 + F 83 -11.8 -3.23149 | opp_overlap 619168, overlap 619162 619162 619168 AATTAATATTATCTA TAAACCCATAATTA CAGGAAA TAATTATGGGTTTA TCATTTATTTAATTT TERM 839 619168 - 619194 + F 76 -8.2 -4.23391 | opp_overlap 619168, overlap 619164 619162 619162 AATATTATCTATAAA CCCATAATTA CAGGAAA TAATTATGGG TTTATCATTTATTTA TERM 840 619194 - 619168 - f 79 -8.9 -3.94811 | opp_overlap 619168 619164 619162 619162 AATATTATCTATAAA CCCATAATTAC AGGAA ATAATTATGGG TTTATCATTTATTTA fepE 619364 - 620497 + | ferric enterobactin transport protein fepE fepC 621309 - 620494 - | ferric enterobactin ABC transporter, ATP-binding protein FepC fepG 622298 - 621306 - | ferric enterobactin ABC transporter, permease protein FepG TERM 841 622090 - 622064 - G 70 -4.2 -4.67353 | overlap 622065 TCAGCGACTGAAAAA TCGCGCCGCTGA CGC CCAGAGCCGCGC CAATTAACAGCGCCA fepD 623299 - 622295 - | ferric enterobactin transport system permease protein fepD EcSMS35_0611 623410 - 624660 + | siderophore transporter fepB 625620 - 624664 - | ferrienterobactin ABC transporter, ferrienterobactin-binding periplasmic protein FepB TERM 842 625284 - 625329 + g 74 -8.4 -3.89435 | gap 2, overlap 625275 625325 GATCCGGCATTTGCG CGGCAACGGCTTCTGCACTCGG TTCG CCGA-TATAG-AGCCGTTGCAG TTTGCGTTCTTTCGC entC 625809 - 626984 + | isochorismate synthase, entC TERM 843 628204 - 628219 + G 71 -3.2 -4.87626 | AGCACAATGCCAGCG CCTTTG ATGC CAACGG TTTTTACTGTTCCGG TERM 844 628589 - 628569 - g 70 -3.9 -4.72201 | overlap 628572 GTCGATAAAAAACAA TTACGTCAG TGG CTGGCGTCA CGCACATCAGCCTGA entE 626994 - 628604 + | enterobactin synthetase component E entB 628618 - 629475 + | isochorismatase TERM 845 629531 - 629546 + G 70 -6.1 -4.15044 | GAAAGGTATCGGCTA CGCCA CGGCGC TGGCG TTTGTTGAGGCGGGA entA 629475 - 630221 + | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase EcSMS35_0617 630224 - 630637 + | putative esterase YbdB TERM 846 632290 - 632302 + G 72 -6.9 -4.19177 | overlap 632289 GGTGGATGCAGGTAC GCGTG CTG CGCGC TTTATGTTGCAGGAT cstA 630818 - 632923 + | carbon starvation protein A EcSMS35_0619 633036 - 633233 + | hypothetical protein EcSMS35_0620 634331 - 633243 - | alcohol dehydrogenase, iron-containing TERM 847 635000 - 635028 + G 76 -3.8 -4.98255 | gap 1, overlap 634999 GGCTGATTTCTCCGC TCT-GTGGCAGGC GATT GCCGGGCACGAGA TTTTTGTCATTAGCG TERM 848 635567 - 635595 + G 77 -8.2 -4.14764 | gap 1, opp_overlap 635563 GAAGGAATCGACGTT GCTGGCAGCAG CAGAACGC CTGC-GCCAGC TTTAGTTATTTAACC EcSMS35_0621 634440 - 635600 + | aminotransferase, classes I and II EcSMS35_0622 636218 - 635601 - | immunoglobulin-binding regulator family protein EcSMS35_0623 637423 - 636203 - | phosphoadenosine phosphosulfate reductase family protein TERM 849 637443 - 637431 - R 74 -5.5 -4.73448 | ATAGACATCTAAAAA CGCTC TCT GAACG TTACGGGGTGACTCG EcSMS35_0624 638472 - 637570 - | LysR family transcriptional regulator dsbG 639483 - 638677 - | thiol:disulfide interchange protein DsbG TERM 850 639135 - 639158 + g 79 -4.6 -4.89063 | gap 1, overlap 639135 639138 CCATCCGTTGCCACA TTT-CGCGTCC GGC GGGTGCGTAAA TTTCTTTTTCGATAA TERM 851 639870 - 639848 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 639795 - 640358 + | alkyl hydroperoxide reductase subunit C TERM 852 640399 - 640380 - f 100 -13.6 -3.3482 | opp_overlap 640380 CAATCGCGTAATTAA TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 853 640380 - 640399 + F 100 -13.6 -4.63218 | opp_overlap 640380 CAATCGCGTAATTAA TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 854 640531 - 640514 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 640457 - 642052 + | alkyl hydroperoxide reductase subunit F TERM 855 642083 - 642106 + T 100 -13.1 -5.5074 | opp_overlap 642098 ACCTGCAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATTGCATTA TERM 856 642153 - 642126 - T 100 -11.2 -4.7373 | overlap 642098 TTATTGCATTAAAAA GCCCTGCAGGGA TGGC TCCGGGCAGGGC GGGATACTTATTCTG uspG 642601 - 642173 - | universal stress protein G TERM 857 642922 - 642903 - R 89 -12.2 -3.60805 | ATATTTGAGCGGAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 643367 - 642957 - | regulator of nucleoside diphosphate kinase TERM 858 643425 - 643447 + r 87 -11.2 -3.6608 | opp_overlap 643425 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT TERM 859 643447 - 643425 - R 100 -12.7 -5.11836 | opp_overlap 643425 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 860 643496 - 643530 + r 72 -8.6 -3.6164 | overlap 643482 CTCTTTGAAGTGATT TGCGTCACATTCAGGG AAT TCCTCAATGTAGCGCA TTATGTATAAATCTT rna 644403 - 643597 - | ribonuclease I TERM 861 644381 - 644367 - G 77 -8.5 -4.13872 | overlap 644358 644377 644378 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGCCAGAATG TERM 862 644451 - 644492 + r 76 -7.9 -4.19371 | opp_overlap 644458, overlap 644454 CTATCTATTAAATCA TAAAAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 863 644454 - 644489 + r 71 -9.6 -3.10512 | opp_overlap 644458, overlap 644451 TCTATTAAATCATAA AAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGA TGATTTATTCAGCGT TERM 864 644485 - 644458 - R 100 -18.5 -5.42265 | opp_overlap 644454 644451 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA EcSMS35_0631 645947 - 644517 - | sodium:sulfate symporter family protein TERM 865 645498 - 645482 - G 77 -6.5 -4.64598 | opp_overlap 645488, overlap 645453 645483 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 866 645497 - 645483 - G 72 -10 -3.38036 | opp_overlap 645488, overlap 645453 645482 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG citG 646908 - 646030 - | triphosphoribosyl-dephospho-CoA synthase citX 647434 - 646883 - | apo-citrate lyase phosphoribosyl-dephospho-CoA transferase citF 648970 - 647438 - | citrate lyase, alpha subunit citE 649889 - 648981 - | citrate (pro-3S)-lyase, beta subunit citD 650182 - 649886 - | citrate lyase acyl carrier protein citC 651255 - 650197 - | [citrate (pro-3S)-lyase] ligase TERM 867 650505 - 650485 - G 72 -7.5 -3.93695 | TTCAGTACCGACAAA GCGGTGAGT TAC ACCCAGCGC GGGAGCGAGGTACTG TERM 868 650757 - 650725 - G 75 -5 -4.8622 | gap 2, overlap 650727 650729 TTCTTTAACTAAAAA CAGA-TGCAAC-CAGT CGC ACTGTGCTGCAGCCTG TTGAATCAGATAACG TERM 869 650941 - 650930 - G 77 -7.2 -4.58395 | opp_overlap 650937, overlap 650932 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT TERM 870 651189 - 651203 + g 100 -2.7 -6.14618 | overlap 651190 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 871 651190 - 651202 + g 70 -6.2 -4.25111 | overlap 651189 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 872 652816 - 652828 + GH 71 -3.3 -4.7373 | TTTGCCGATCGCCAG GTGGC GGG GCTGC TTTTTGGTAAAGTGC dpiB 651634 - 653292 + | sensor histidine kinase DpiB dpiA 653261 - 653941 + | transcriptional regulatory protein DpiA TERM 873 653973 - 653951 - T 100 -13.4 -4.0162 | opp_overlap 653947 653946 653944, overlap 653962 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATGACTATTTACTTG dcuC 655367 - 653982 - | anaerobic C4-dicarboxylate transporter DcuC TERM 874 655426 - 655409 - R 89 -2.7 -5.72254 | GTAAATAATAAAAAA TTCCTAA AAAC TAAGGAA AAAATATGCCCAATA TERM 875 656130 - 656145 + r 74 -3.2 -5.03747 | opp_overlap 656132, overlap 656132 GCAAACACATCGAAT CAGCCT ATTT AGGCTA TTTTTTCCACCATTT EcSMS35_0642 657159 - 656167 - | IS5 transposase TERM 876 657380 - 657357 - H 100 -4.5 -5.73978 | overlap 657358 657373 ATGACAAAGAAAAAA CCGATCGCT ATAACG AGCGACCGT GGGGTGGCGGTTTTG TERM 877 657379 - 657358 - H 74 -8 -4.01946 | overlap 657357 657373 TGACAAAGAAAAAAC CGATCGCT ATAACG AGCGACCG TGGGGTGGCGGTTTT TERM 878 657848 - 657864 + H 72 -7.3 -4.02302 | opp_overlap 657850 GGTGTACTGGTAACC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 657890 - 658099 + | cold shock protein CspE TERM 879 658139 - 658123 - T 86 -9.4 -4.36729 | opp_overlap 658123 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTCTTT TERM 880 658123 - 658139 + T 100 -9.4 -5.9663 | opp_overlap 658123 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTCTTT crcB 658536 - 658153 - | CrcB protein TERM 881 658601 - 658589 - H 75 -9.1 -3.65314 | opp_overlap 658588 658589 TGTAACGCCGAATAA TCGCC GTT GGCGA ATTTTACGACTCTGA TERM 882 659273 - 659255 - g 77 -3 -5.06414 | opp_overlap 659257 659269, overlap 659257 GTGCGGGAACAAAAA TATCGGGC AAA GCCGGATT ATAGATCCCTTTGGC EcSMS35_0646 658632 - 659420 + | carbon-nitrogen family hydrolase EcSMS35_0647 659549 - 659752 + | twin arginine-targeting protein translocase TERM 883 659816 - 659799 - T 100 -11.3 -5.36441 | opp_overlap 659799 GTTCGATACAAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG TERM 884 659799 - 659816 + T 100 -11.3 -5.24129 | opp_overlap 659799 GTTCGATACAAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG lipA 660818 - 659853 - | lipoic acid synthetase TERM 885 660708 - 660741 + g 74 -6 -4.57073 | gap 1, overlap 660710 TTTCATCCATTCCGG CTTGCGCAGCAGGGC TTCGC GCTCTGTTGC-CACG TTTTTAACCGGGATA EcSMS35_0649 661980 - 661027 - | LysR family transcriptional regulator lipB 662881 - 662240 - | lipoyltransferase EcSMS35_0651 663245 - 662982 - | protein YbeD TERM 886 663303 - 663272 - R 70 -7.2 -3.95986 | opp_overlap 663278, overlap 663274 663278 CGTAACGTAATTAAA TAGCAACTCCCGCC AGAA GGCGGGAGTTTTTT ACTGATGCTTAGTAT TERM 887 663301 - 663274 - R 75 -9.8 -3.56675 | opp_overlap 663278, overlap 663272 663278 TAACGTAATTAAATA GCAACTCCCGCC AGAA GGCGGGAGTTTT TTACTGATGCTTAGT TERM 888 663297 - 663278 - R 100 -15 -3.50456 | opp_overlap 663278, overlap 663274 663272 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT TERM 889 663278 - 663297 + r 100 -15 -5.19212 | opp_overlap 663274 663272 663278 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT dacA 664566 - 663355 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 890 664249 - 664234 - G 77 -10.4 -3.64049 | TGAAGAACCTTTAAA CACCGG GTTA CCGGTG GCCCATGCGTCGTTG rlpA 665794 - 664706 - | rare lipoprotein A TERM 891 665386 - 665362 - G 83 -10 -4.06633 | opp_overlap 665361 665359 GAGAAAGCGAAATAA CGCGGTCGTT GCCGT AAGGACCGCG ATCATTAATGCGCAC mrdB 666917 - 665805 - | rod shape-determining protein RodA TERM 892 666858 - 666892 + g 100 -6.5 -5.80364 | CAGTAAGATCAGCAG CATTGTGGGATCGAG ATGGA CTTTATCCCAGAATG TTTTTTTATTCGGAT mrdA 668821 - 666920 - | penicillin-binding protein 2 TERM 893 667485 - 667498 + g 74 -2.3 -5.03747 | opp_overlap 667496, overlap 667476 667496 ACCGGAATGGTGTCA CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 894 668762 - 668750 - G 77 -6.2 -4.66264 | overlap 668751 CAAAATCCCCAAAAA GGCG ACCAG CGCC CGGCGCACAAACAGC EcSMS35_0656 669319 - 668852 - | hypothetical protein EcSMS35_0657 669640 - 669323 - | iojap family protein cobC 670511 - 669900 - | alpha-ribazole phosphatase nadD 671176 - 670535 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 895 670878 - 670868 - G 70 -4.6 -4.48713 | overlap 670870 CTGACCAATAATAAA CGCC AGC GGCA CGTCCGGTCCTTGTT holA 672209 - 671178 - | DNA polymerase III, delta subunit TERM 896 672188 - 672146 - G 100 -12 -4.45544 | gap 1, opp_overlap 672150, overlap 672148 672150 CGTTACCAAGTAAAA GATACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGT-TG TTCCGGGTACAACCG TERM 897 672187 - 672148 - G 100 -17.1 -3.83437 | opp_overlap 672150, overlap 672146 672150 TTACCAAGTAAAAGA TACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGTT GTTCCGGGTACAACC TERM 898 672150 - 672185 + g 100 -17.5 -3.63515 | opp_overlap 672148 672146 672150 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA TERM 899 672185 - 672150 - G 100 -19.7 -3.49321 | opp_overlap 672150, overlap 672148 672146 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA EcSMS35_0661 672790 - 672209 - | rare lipoprotein B family protein TERM 900 672559 - 672591 + g 70 -4.7 -4.55295 | opp_overlap 672564 CGATGCTCACTTTAC CCAAACGCAGGGATG GAA CGTCCTTACGCGTGG TTTCTTTATCAAGCA TERM 901 672725 - 672706 - G 72 -10 -3.36785 | overlap 672707 TCATAGTGGAAGGAA CCTGCGTG GTAT CACGCAGA TGCCAGCCACACCCG TERM 902 672724 - 672707 - G 73 -11.3 -2.6175 | overlap 672706 CATAGTGGAAGGAAC CTGCGTG GTAT CACGCAG ATGCCAGCCACACCC leuS 675387 - 672805 - | leucyl-tRNA synthetase TERM 903 672933 - 672947 + g 72 -5.6 -4.57341 | overlap 672924 672934 GTTCTTCCGTTGCGT CCACCG GAA CGGTGA TTTTTGCACGGACTT TERM 904 675042 - 675058 + g 78 -5.1 -4.84527 | opp_overlap 675040 AGTCATAACCAAAGC CCAGC ATTTTGA GCTGG TTTTTCATGTATGCG TERM 905 675147 - 675172 + g 74 -6.2 -4.57073 | gap 2, opp_overlap 675146 CAGGCAGACCAAACG CGTCC--CAGCC GATC GGCTGCAGGACG TTTTTGCCCAGCATA EcSMS35_0663 675622 - 676104 + | hypothetical protein TERM 906 676138 - 676161 + GT 70 -3.8 -4.62708 | opp_overlap 676138 676137 CAATAAAGAGAATAT GGGCCG AATAAAATTCCC CGGCCC TTGTTTTTATCTCTT EcSMS35_0665 676070 - 676183 + | hypothetical protein EcSMS35_0664 677152 - 676175 - | hypothetical protein TERM 907 676258 - 676276 + g 76 -11 -3.30039 | opp_overlap 676247, overlap 676255 GATACAGGTCGAGAG CCTGTCGG AGA TCGACAGG TCTTCCTTCTCCGTA TERM 908 677073 - 677057 - G 73 -3.7 -4.81212 | GCGATTATAATAAAA CCCAACA ATA TATTGAG CCTCGCTATCGCCTT EcSMS35_0666 677316 - 678023 + | hypothetical protein EcSMS35_0667 678020 - 679447 + | DnaJ domain-containing protein TERM 909 679472 - 679493 + T 75 -4.3 -4.9934 | overlap 679474 TTAATGTGCGGGAAG CCCGGCAAG TAAT CTTTCCGCG TTTTTGTAATGTTGT EcSMS35_0668 680011 - 679457 - | hypothetical protein TERM 910 680670 - 680652 - g 77 -10.2 -3.66784 | TCAGTGCGAAGACAA CGCTTCGC TAC GCGAGGCG CTAACCCTGTACAAA EcSMS35_0669 680113 - 680820 + | hypothetical protein EcSMS35_0670 680817 - 682268 + | DnaJ domain-containing protein TERM 911 682318 - 682353 + T 85 -11.2 -3.53811 | opp_overlap 682320 682350, overlap 682303 682332 682334 682337 GATGCGATGCTAACG CATCTTATCCGACCTA CGAG TAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 912 682351 - 682320 - T 81 -12.4 -2.53876 | opp_overlap 682303 682318 682332 682334 682337, overlap 682350 TGCGATGCTAACGCA TCTTATCCGACCTA CGAG TAGGCCGGATAAGG CGTTTACGCCGCATC hscC 684049 - 682379 - | DnaK family protein HscC TERM 913 684121 - 684084 - R 77 -9.3 -3.77089 | gap 1, overlap 684082 AAAAAGAGATAAACA GATTAAGACCACC-CAGG TAA CGCGTGGTGATCTTAATC AATGACGTGTGTTAA EcSMS35_0672 685068 - 684133 - | inosine-uridine preferring nucleoside hydrolase gltL 685911 - 685186 - | glutamate/aspartate ABC transporter, ATP-binding protein gltK 686585 - 685911 - | glutamate/aspartate ABC transporter, permease protein GltK gltJ 687325 - 686585 - | glutamate/aspartate ABC transporter, permease protein GltJ TERM 914 687016 - 686999 - G 71 -2 -5.01811 | GGATGAAAGGAAAAA CTGAAT ATTGGG ATCCAG CTCGGCCTTAAACCA TERM 915 687372 - 687345 - R 100 -16.4 -5.26316 | CTACTCCAGAAAAAA GAGGGTAGCAGC GTTA ACTGCTACCCTC GAAGATTGTTACCCA gltI 688403 - 687495 - | glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein TERM 916 687738 - 687749 + g 70 -5.8 -4.29326 | overlap 687729 CTTGCCGACGATTTC CCAG TTGT CTGG TTTCTTCGCTTTCGC EcSMS35_0677 688665 - 688546 - | hypothetical protein EcSMS35_0679 688693 - 688815 + | hypothetical protein lnt 690338 - 688800 - | apolipoprotein N-acyltransferase TERM 917 690314 - 690288 - G 81 -10.2 -3.97307 | gap 1, opp_overlap 690288 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC TERM 918 690288 - 690314 + g 70 -10.2 -3.20723 | gap 1, opp_overlap 690288 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC corC 691241 - 690363 - | magnesium and cobalt efflux protein CorC TERM 919 691300 - 691277 - R 84 -8.8 -4.43477 | overlap 691279 691296 GTTAGTTAATCAAAA CGCCGTCGTT AATC ACCAACGGCG GGGACGTCTGCCAGT EcSMS35_0681 691798 - 691331 - | hypothetical protein TERM 920 691739 - 691754 + g 73 -9 -3.67611 | CTGAAACTGGCTCTC TTCCGG TAAC CCGGAA TTATCTTCACATGCC EcSMS35_0682 692835 - 691795 - | PhoH family protein TERM 921 692474 - 692493 + g 82 -9.2 -4.26292 | overlap 692469 GCCTGGTTTGGCGTA CGCGGCTT GATT ACGCCGCG TTTGGTTTTGATATT EcSMS35_0683 693013 - 692894 - | hypothetical protein TERM 922 692983 - 692958 - GR 100 -13.3 -5.51046 | gap 1, overlap 692961 TAAAGAGAGAAAAAA CAAGGCCCACCG GAA CGGCGGGCCT-G AGAATTACGGCTGAT TERM 923 692981 - 692961 - GR 100 -16.1 -4.78477 | overlap 692958 AGAGAGAAAAAACAA GGCCCACCG GAA CGGCGGGCC TGAGAATTACGGCTG miaB 694412 - 692988 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 924 694063 - 694040 - G 72 -10.2 -3.39505 | gap 1, opp_overlap 694039 694052 AGCTGATATCTACAA CCGGGCTGCGG TCG CCGC-GCACGG AGTTGATCATCTCCG ubiF 694558 - 695733 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 925 695782 - 695762 - Tf 77 -6.7 -4.51799 | ACCAAAGCTACAAAA GCGTGCGGA CGG TCCCCTCGC CCCTCGGGTGAGGGT TERM 926 695944 - 695917 - Tf 81 -11.4 -3.2697 | opp_overlap 695923, overlap 695923 ATATACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTT AATGTGGCTGGGGTA TERM 927 695923 - 695938 + TF 100 -10.4 -5.22312 | opp_overlap 695917 695923 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 928 695938 - 695923 - Tf 93 -10.4 -5.1417 | opp_overlap 695923, overlap 695917 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 929 696032 - 696048 + TF 71 -9.5 -3.1085 | overlap 696034 TACCCCAACTGGGTG CACTTAC AAG GTAAGTG TCTTGAATAAATTGG TERM 930 696133 - 696144 + TF 73 -4.4 -4.81249 | CCGCTTGGCGATACC CCAA CAAA TTGG TTTTTGAATTTGCCG TERM 931 696996 - 697023 + TF 100 -14.2 -3.45634 | opp_overlap 696998, overlap 696992 696998 CGCCCCAGTAACTGA AATTGCCCCGGA TTTC TCCGGGGCAATA TTATACGTCTTATTT TERM 932 696998 - 697021 + TF 100 -16.8 -3.28582 | opp_overlap 696998, overlap 696996 696992 CCCCAGTAACTGAAA TTGCCCCGGA TTTC TCCGGGGCAA TATTATACGTCTTAT TERM 933 697021 - 696998 - Tf 100 -16.8 -3.78329 | opp_overlap 696998 696996 696992 CCCCAGTAACTGAAA TTGCCCCGGA TTTC TCCGGGGCAA TATTATACGTCTTAT asnB 698697 - 697033 - | asparagine synthase (glutamine-hydrolyzing) TERM 934 697397 - 697407 + gF 71 -3.2 -4.87318 | overlap 697391 GCTTCAAAACATTCA CGCA GGA TGTG TTTTTCCATTTTGCC TERM 935 698768 - 698754 - gR 100 -7.8 -5.40072 | overlap 698763 698766 GCTTGTTTAAAAAAA TGCCGC AAA GCAGCA CTGTGCGCAAGCGAT EcSMS35_0694 698666 - 698830 + | putative lipoprotein TERM 936 698925 - 698950 + Tr 86 -13.3 -3.06162 | opp_overlap 698925 698929, overlap 698929 GATGGCTAAAAATAA GAAACCACGCC CTGA GGCGTGGTTGC TATTCAGATAACGTC TERM 937 698950 - 698925 - TR 100 -13.3 -4.41633 | opp_overlap 698925 698929, overlap 698929 GATGGCTAAAAATAA GAAACCACGCC CTGA GGCGTGGTTGC TATTCAGATAACGTC TERM 938 698929 - 698946 + Tr 90 -12.7 -3.37245 | opp_overlap 698925 698929, overlap 698925 GCTAAAAATAAGAAA CCACGCC CTGA GGCGTGG TTGCTATTCAGATAA TERM 939 698946 - 698929 - TR 100 -12.7 -4.76802 | opp_overlap 698929 698925, overlap 698925 GCTAAAAATAAGAAA CCACGCC CTGA GGCGTGG TTGCTATTCAGATAA nagD 699706 - 698954 - | nagD protein nagC 700974 - 699754 - | N-acetylglucosamine repressor nagA2 702131 - 700983 - | N-acetylglucosamine-6-phosphate deacetylase TERM 940 701286 - 701276 - G 70 -4 -4.59773 | TTTTACCCGCAAAAA TGAA CTG TTCA ATGTTGGCACCTGCT nagB 702991 - 702191 - | glucosamine-6-phosphate isomerase TERM 941 702605 - 702618 + g 100 -6.7 -5.52023 | AAACAGATGAATTTT TCCGT AAGA ACGGA TTTTTTCTTCATACT EcSMS35_0699 703174 - 703040 - | hypothetical protein TERM 942 703379 - 703401 + G 74 -11.2 -3.1886 | overlap 703391 TACAGCTCCCTATCG CGGTGCTGCC GGT GGCGGCGCTG TTGCTGCGATTCGGT nagE 703324 - 705270 + | PTS system, N-acetylglucosamine-specific IICBA component EcSMS35_0700 705395 - 705240 - | hypothetical protein TERM 943 705321 - 705343 + g 100 -12 -6.15828 | opp_overlap 705321 ATCCAACAATGACAA GCGGTGGAGA TCT TCTCTGCCGC TTTTTTTTTCATCAA TERM 944 706501 - 706489 - g 86 -9.1 -4.42639 | opp_overlap 706483 706493, overlap 706491 AGATCTCAACGAAAA TGCGC CGC GCGCA ATGGCGGTTATCGAT glnS 705473 - 707137 + | glutaminyl-tRNA synthetase TERM 945 707222 - 707194 - f 82 -7.3 -4.60648 | opp_overlap 707200, overlap 707200 AAAATAGCAAACAAA CCCAAACGCCGCG CTC CGCGGCGTTTTTT TTCTGCTTTTCTTCG TERM 946 707200 - 707216 + F 100 -15.1 -6.04378 | opp_overlap 707194 707200 GCAAACAAACCCAAA CGCCGCG CTC CGCGGCG TTTTTTTTCTGCTTT TERM 947 707216 - 707200 - f 100 -15.1 -3.96542 | opp_overlap 707200, overlap 707194 GCAAACAAACCCAAA CGCCGCG CTC CGCGGCG TTTTTTTTCTGCTTT TERM 948 708430 - 708410 - g 74 -8.3 -3.86897 | opp_overlap 708409 708416 GGTACGCGCGATAAA GTTGACGAT CGC AGCGTCAAC GATCTTTATGACGGC TERM 949 708443 - 708469 + G 74 -8.7 -3.90112 | gap 1, overlap 708443 AACGATCTTTATGAC GG-CACCGCCTG GCTG CAGGCGTTGACC TTTGGTTACCGGGCG TERM 950 708692 - 708679 - g 81 -6.7 -4.63527 | GTATGACCTGAAAAA CTGGA ATCT TCCAG GCTTCGCCATCGGCG EcSMS35_0703 707579 - 708985 + | OprD family outer membrane porin EcSMS35_0704 709035 - 709361 + | putative lipoprotein TERM 951 709362 - 709381 + T 78 -5.7 -5.011 | opp_overlap 709362 709359 709364 AGTAATAACAAATAA GTGAGAG CTGTAA CTCTCGC TTTTCTTATTTCCCT TERM 952 709403 - 709430 + T 77 -11.4 -2.72463 | opp_overlap 709408, overlap 709408 TATTTCCCTTGCATA AAAAAGCCAACC CGCA GGTTGGCTTTTC TCGTTCAGGCTGGCT TERM 953 709425 - 709408 - T 100 -11.3 -5.24129 | opp_overlap 709403 709408 CCCTTGCATAAAAAA GCCAACC CGCA GGTTGGC TTTTCTCGTTCAGGC TERM 954 709408 - 709425 + T 100 -11.3 -4.5442 | opp_overlap 709408, overlap 709403 CCCTTGCATAAAAAA GCCAACC CGCA GGTTGGC TTTTCTCGTTCAGGC fur 709891 - 709445 - | ferric uptake regulation protein TERM 955 710174 - 710147 - R 100 -16.4 -3.19463 | overlap 710149 GGCATTATCTATTAA TACGGCGTAGAC ATGA GTCTACGCCGCA TCACATCAGGCATTG TERM 956 710172 - 710149 - R 100 -16.8 -3.15996 | overlap 710147 CATTATCTATTAATA CGGCGTAGAC ATGA GTCTACGCCG CATCACATCAGGCAT fldA 710710 - 710180 - | flavodoxin TERM 957 710413 - 710429 + g 70 -10.9 -2.78495 | opp_overlap 710412, overlap 710411 TGGTGCCCAATGCAT CGCAGAA GTA TTCTGCG TAATCTTCCTGGTCG EcSMS35_0707 711143 - 710850 - | CopG family protein ybfF 712047 - 711283 - | esterase YbfF TERM 958 712436 - 712454 + G 81 -11 -3.60865 | opp_overlap 712435 712436, overlap 712431 ACGATTAAAGACAAG GTTCGCGC AAT GCGTGAAC TTCTGCTTTCGGATG seqA 712232 - 712777 + | protein SeqA TERM 959 712838 - 712817 - g 78 -10.9 -3.42621 | opp_overlap 712812 AATGGCAATCCACAA TCGTGCAGG CCAA CCTGCACAA CAGAGTGATTTGATT pgm 712803 - 714443 + | phosphoglucomutase, alpha-D-glucose phosphate-specific TERM 960 714482 - 714463 - f 77 -3.4 -5.30348 | opp_overlap 714464, overlap 714464 ATTTAATAAGAAAAA GGGCGGTC AGAA GATCGCCT TTTTTTACTTATGAC TERM 961 714464 - 714481 + F 100 -9.1 -5.68023 | opp_overlap 714463 714464 TTTAATAAGAAAAAG GGCGGTC AGAA GATCGCC TTTTTTTACTTATGA TERM 962 714605 - 714576 - f 80 -10.7 -3.30124 | overlap 714578 714579 TTGTAGGCCGGATAA GACGTTCACGCCG CATC CGGCATGAACAAC GAGCACTTTGCCAAC TERM 963 714603 - 714578 - f 83 -11.9 -3.21924 | overlap 714576 714579 GTAGGCCGGATAAGA CGTTCACGCCG CATC CGGCATGAACA ACGAGCACTTTGCCA TERM 964 714602 - 714579 - f 84 -13.2 -2.5294 | overlap 714578 714576 TAGGCCGGATAAGAC GTTCACGCCG CATC CGGCATGAAC AACGAGCACTTTGCC TERM 965 714675 - 714649 - g 72 -5.9 -4.29845 | opp_overlap 714672, overlap 714642 714665 CAAGGGAATTCAAAA TGAAGACCAAA AGGAG TCTGGTCGTCA GAGTGGCATTAATTA TERM 966 715033 - 715046 + G 74 -2.3 -5.09895 | TTAATGAGGATTATG TCAGC GAAA GCGGA TTTTTTGGCTCGATG EcSMS35_0711 714648 - 715142 + | putative lipoprotein EcSMS35_0712 715833 - 715183 - | hypothetical protein EcSMS35_0713 716060 - 715911 - | hypothetical protein TERM 967 716144 - 716163 + r 100 -9.3 -5.67283 | opp_overlap 716144 GTCAACAAACAGAAA GGGCGAT CATTCA ATCGCCC TTTTTTATTTCGCTT TERM 968 716163 - 716144 - R 89 -10 -4.46072 | opp_overlap 716144 GTCAACAAACAGAAA GGGCGATC ATTC AATCGCCC TTTTTTATTTCGCTT potE 717501 - 716182 - | putrescine-ornithine antiporter speF 719696 - 717498 - | ornithine decarboxylase, inducible TERM 969 720253 - 720234 - R 83 -6.4 -5.0916 | opp_overlap 720234 TGTTTAAGATAAAAA GCCGTATT TATT ATTACGGC TTTAATTAATAAAAG kdpE 720969 - 720292 - | KDP operon transcriptional regulatory protein KdpE kdpD 723650 - 720966 - | sensor protein KdpD TERM 970 723175 - 723145 - G 88 -2.5 -5.52384 | gap 1, opp_overlap 723151, overlap 723148 GCGGCATCAAAAAAA GGAT-CGGGCACGG TTTC CCGTACCTGAATTC CGGTGACGCCGCTGA TERM 971 723320 - 723299 - G 73 -11.6 -2.66216 | opp_overlap 723299, overlap 723298 TGGGATGACGAGAAC CTGGCGCA TTACTG TGCGCCAG TTCGTCCATTAAGAT TERM 972 723299 - 723320 + g 81 -12.3 -3.22091 | opp_overlap 723299 723298 TGGGATGACGAGAAC CTGGCGCAT TACT GTGCGCCAG TTCGTCCATTAAGAT kdpC 724215 - 723643 - | K+-transporting ATPase, C subunit kdpB 726272 - 724224 - | K+-transporting ATPase, B subunit TERM 973 724522 - 724505 - G 77 -9.9 -3.61517 | opp_overlap 724503 ACGCCGCCGGAATAA TGGCGAA GTAT TTCGCCA CATCGTTGGCAATGC TERM 974 725262 - 725278 + g 74 -2.2 -5.14563 | gap 1, overlap 725263 CAGCGAAGCCAGTTG TGC-GGC GTCA GCCAGCG TTTTTTCATCCACGC TERM 975 725566 - 725550 - G 74 -7.9 -4.11216 | overlap 725551 GCCCCACGCGGAAAA CGGCCAC AGC GTGGCGG TTGCCAGTAAAAAGA TERM 976 726108 - 726084 - G 74 -9.9 -3.53343 | AATTGCCGCGCTAAA CAGCGCATTGC CAG GCATCGCGCCG CTTGCCATTGCGATG kdpA 727968 - 726295 - | K+-transporting ATPase, A subunit TERM 977 726419 - 726436 + g 75 -5.5 -4.72272 | GTAGGCAGTGTACCG GAGCTGG CGGG CTGGCTC TTTTTACTCACCAGC TERM 978 728170 - 728159 - H 80 -5.8 -5.14894 | opp_overlap 728159 AAAAAAGTATAAAAA TGGC AAAA GCCA TGATTTAACTAATGG EcSMS35_0721 728370 - 728576 + | hypothetical protein TERM 979 728629 - 728598 - f 100 -23.2 -3.59087 | opp_overlap 728598 728603, overlap 728603 AATATTACGTTCAAA GAAAACCGCCAGCG GAAA CGCTGGCGGTTTTC TTTTTTCGGCGTCTA TERM 980 728598 - 728629 + F 100 -23.2 -5.04385 | opp_overlap 728598 728603, overlap 728603 AATATTACGTTCAAA GAAAACCGCCAGCG GAAA CGCTGGCGGTTTTC TTTTTTCGGCGTCTA TERM 981 728603 - 728624 + F 100 -17.3 -5.42198 | opp_overlap 728603 728598, overlap 728598 TACGTTCAAAGAAAA CCGCCAGCG GAAA CGCTGGCGG TTTTCTTTTTTCGGC TERM 982 728624 - 728603 - f 100 -17.3 -4.87803 | opp_overlap 728598 728603, overlap 728598 TACGTTCAAAGAAAA CCGCCAGCG GAAA CGCTGGCGG TTTTCTTTTTTCGGC EcSMS35_0722 728677 - 729186 + | hypothetical protein TERM 983 730157 - 730147 - g 81 -8.2 -4.30014 | opp_overlap 730147 730146 GGCAGGAAGGCAAAA CGGG ATA CCCG ATTGTTGATGCTGCC phrB 729183 - 730601 + | deoxyribodipyrimidine photolyase TERM 984 730628 - 730596 - T 87 -13.6 -2.98381 | opp_overlap 730597, overlap 730593 GAAGCGAGGAAAGGA GCCTGATAAAACGC AGCGA GCGTTTTATCAGGT ATGGTGCTGGCCTAT TERM 985 730597 - 730627 + T 100 -17.1 -2.82834 | opp_overlap 730596 730593 AAGCGAGGAAAGGAG CCTGATAAAACGC AGCGA GCGTTTTATCAGG TATGGTGCTGGCCTA EcSMS35_0724 732124 - 730643 - | amino acid/peptide transporter TERM 986 731324 - 731338 + g 77 -2.8 -5.1417 | opp_overlap 731294 GGTAACAATCAGCCC CAGC TCCTTAC GCTG TTTTTGGTTTTCTGC TERM 987 732895 - 732924 + G 72 -6.3 -4.42386 | overlap 732897 TGAGGTGGTCCAGCG CGTTGCCTGGTGC ACGG GCGGCGGGCAAAG TTTTATCGATAGCGC TERM 988 732936 - 732960 + G 70 -3.5 -4.71426 | gap 1, overlap 732935 732939 AAAGTTTTATCGATA GCG-CCGCGC GTTTTG GCGTGGATGC TTTTATTACTGGCGA EcSMS35_0725 732395 - 733138 + | NIF3 family protein EcSMS35_0726 733161 - 733817 + | allophanate hydrolase, subunit 1 EcSMS35_0727 733811 - 734743 + | allophanate hydrolase, subunit 2 TERM 989 734909 - 734926 + G 78 -8.5 -4.25104 | TGGCGCTCACCCGAG TTTTCCC GACA GGGAAAA TTTTGGTCGCAGCGC EcSMS35_0728 734733 - 735467 + | LamB/YcsF family protein nei 735503 - 736294 + | endonuclease VIII abrB 737337 - 736291 - | protein AbrB EcSMS35_0731 737863 - 737489 - | hypothetical protein TERM 990 737867 - 737882 + r 73 -2.6 -5.11937 | opp_overlap 737860, overlap 737869 737874 AAAATCAATCACCTG TGTTTC CGGT GAAATA TTTTTTCACCTTATT TERM 991 737981 - 737956 - R 84 -7.6 -4.99035 | gap 1 TCAGCCATATAAAAA GAACCCGCTCT ATTAA AG-GCGGGTCC GGAAAGTGAACGGCT gltA 739293 - 738010 - | citrate (Si)-synthase TERM 992 739603 - 739613 + H 70 -5.4 -4.32436 | CTTCATAACTTTTAC GCAT TAT ATGC TTTTCCTGGTAATGT TERM 993 740101 - 740112 + G 70 -5.8 -4.1822 | CTCCATCGCGTTTCC GGTG TGAT CACC TTTGTTGCAGTGGGC sdhC 739987 - 740391 + | succinate dehydrogenase, cytochrome b556 subunit sdhD 740385 - 740732 + | succinate dehydrogenase, hydrophobic membrane anchor protein sdhA 740732 - 742498 + | succinate dehydrogenase, flavoprotein subunit sdhB 742514 - 743230 + | succinate dehydrogenase, iron-sulfur subunit TERM 994 743243 - 743261 + F 86 -13.1 -3.03007 | TAATTAAATGTTGAT GCCGGGG AAATC CCCCGGC TATTCAGGAAATCTT TERM 995 743313 - 743273 - f 71 -7.7 -3.76224 | opp_overlap 743273 743274, overlap 743274 743312 CGGCTATTCAGGAAA TCTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAGG TTCCTTCGCGAGCCA TERM 996 743312 - 743274 - f 78 -11.2 -2.8552 | opp_overlap 743273 743274, overlap 743273 GGCTATTCAGGAAAT CTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAG GTTCCTTCGCGAGCC TERM 997 743990 - 743974 - g 83 -5.1 -5.11063 | AGCACCGAAGAAAAA CGCTG GATCCAA CAGCG TATCGAGTCTGGTCG TERM 998 744046 - 744034 - g 100 -7.7 -5.48063 | AGCGAAGAGAAAAAA CGCTT CTT AAGCG AACTGACCGCCGCTG TERM 999 744280 - 744253 - g 71 -2 -5.00616 | gap 1, opp_overlap 744261, overlap 744255 GTGCTGGGTAAAAAA CCGCAAGACTTGT TCG ACGAGT-TTGCCG GTAAACATAAAGAAC sucA 743431 - 746232 + | oxoglutarate dehydrogenase (succinyl-transferring), E1 component sucB 746247 - 747464 + | dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex TERM 1000 747485 - 747519 + F 81 -10.8 -3.55444 | TAAGTTTCACCTGCA CTGTAGACCGACGT GGATAGG GTGTCGGTCTACGG TTTAAAAGATAACGA TERM 1001 747983 - 747963 - g 73 -4 -4.81249 | gap 1 GTGGAAATCGAAAAA GTGGCGGAA GAAA CTCCGC-AC CTGATCCACAAAGTT TERM 1002 748629 - 748616 - g 76 -9.5 -3.73068 | TCTGGAAGGTAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 747558 - 748724 + | succinate-CoA ligase, beta subunit sucD 748724 - 749593 + | succinate-CoA ligase, alpha subunit TERM 1003 749669 - 749686 + F 100 -11.3 -5.31456 | GGTTTCGACATGGTT GGCCATC ATAT GATGGCC TTTTTTATGCCTTAA TERM 1004 749885 - 749872 - g 75 -4.5 -4.85545 | opp_overlap 749872 AGTAAATCAACAAAA GCGAT GTTC ACCGC TTATCGTCAAGTCGT EcSMS35_0742 749842 - 749988 + | hypothetical protein TERM 1005 750197 - 750220 + F 100 -11.2 -5.243 | TTGCTGCTTTGGTTG CCATTACTTA GCAA TAAGTAATGG TTTTTTGATAGTTTC EcSMS35_0743 750259 - 751164 + | LysR family transcriptional regulator TERM 1006 751195 - 751167 - T 100 -16 -4.24948 | opp_overlap 751168, overlap 751168 GCAGGAGATGTAAAA CCTGCGCCTGGC GGGAT GCCAGGCGCAGT TATTACCAGTCGATA TERM 1007 751168 - 751194 + T 100 -20.2 -3.63694 | opp_overlap 751168 751167 CAGGAGATGTAAAAC CTGCGCCTGGCG GGA TGCCAGGCGCAG TTATTACCAGTCGAT TERM 1008 751194 - 751168 - T 100 -19.5 -3.14487 | opp_overlap 751168, overlap 751167 CAGGAGATGTAAAAC CTGCGCCTGGC GGGAT GCCAGGCGCAG TTATTACCAGTCGAT cobO 751800 - 751198 - | cob(I)yrinic acid a,c-diamide adenosyltransferase EcSMS35_0745 753462 - 751810 - | tartrate/fumarate family Fe-S type hydro-lyase TERM 1009 752243 - 752262 + g 77 -3.4 -5.09259 | overlap 752244 TAATCCGGCATCGGT TCGCCGCT ATCC AGCCGCGC TTTTATTTTGGCGTG TERM 1010 753320 - 753304 - G 81 -8.7 -4.38154 | AGAGGCTTCATAAAA TGCCTGC CGG GCAAGCA GCGTTAATGCTTCAG EcSMS35_0746 754850 - 753570 - | dicarboxylate/amino acid:cation family protein TERM 1011 754895 - 754928 + r 74 -11.1 -2.74371 | opp_overlap 754896 754902, overlap 754893 ATCAGAATCAGGAGA AGTAGAAGCCTGAAT AGAG ATTCAGGCATCTACC TGCTATTACAACCTT TERM 1012 754927 - 754896 - R 100 -14.6 -3.48684 | opp_overlap 754895 754893, overlap 754902 TCAGAATCAGGAGAA GTAGAAGCCTGAAT AGAG ATTCAGGCATCTAC CTGCTATTACAACCT TERM 1013 754921 - 754902 - R 83 -10.8 -3.57783 | opp_overlap 754895 754893, overlap 754896 TCAGGAGAAGTAGAA GCCTGAAT AGAG ATTCAGGC ATCTACCTGCTATTA EcSMS35_0747 755328 - 755011 - | hypothetical protein EcSMS35_0748 756695 - 755325 - | hypothetical protein EcSMS35_0749 757940 - 756699 - | methylaspartate ammonia-lyase TERM 1014 757745 - 757758 + g 81 -9.5 -4.09685 | opp_overlap 757737 757722 CAGCACAGTCACCTA CGGCG ACCG CGCCG TTTTCCAGAATCAAC mutE 759385 - 757940 - | methylaspartate mutase, E subunit EcSMS35_0751 760792 - 759404 - | putative glutamate mutase mutL TERM 1015 759845 - 759825 - G 71 -2.3 -4.98857 | opp_overlap 759829 AGGTAATGATAAAAA GCGTCCAGC TGT GCGGGTTGC TGAGCAAAATTCACA TERM 1016 760030 - 760004 - G 72 -10.9 -3.05343 | opp_overlap 759990, overlap 760006 760008 GGCACAGGCGGAATA GACATCGGTGG TTGCG CCACCCATGTC GATCAGCATGAACTC mamA 761241 - 760792 - | methylaspartate mutase, S subunit EcSMS35_0753 762210 - 761788 - | hypothetical protein TERM 1017 761911 - 761901 - G 88 -5.4 -5.17054 | ACAATATCGAAAAAA TGAC AGT GTCA GAATTAATTTCAATT EcSMS35_0754 763235 - 762291 - | hypothetical protein TERM 1018 763690 - 763703 + H 74 -3.9 -4.99435 | CATATTTGGTTGGTT TTGAT ATAA ATCAA TTTTTAATTCTTGAA cydA 764041 - 765609 + | cytochrome d ubiquinol oxidase, subunit I cydB1 765625 - 766764 + | cytochrome d ubiquinol oxidase, subunit II EcSMS35_0757 766779 - 766892 + | cyd operon protein YbgT TERM 1019 766927 - 766954 + G 81 -12.1 -3.21595 | gap 1, opp_overlap 766933, overlap 766933 766946 CTTGTATGCGGTAAT GGACAAGCGCCC CCTGC GGGCGCTT-TCC TTCGTGATGGCGCTT TERM 1020 766949 - 766933 - g 76 -10.8 -3.41878 | opp_overlap 766927 766933 766946 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 1021 766933 - 766949 + G 86 -10.8 -3.97042 | opp_overlap 766933, overlap 766927 766946 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 1022 767110 - 767123 + G 77 -3.1 -5.12707 | overlap 767115 TCGTCCGCAGAAGGT TCTCT GGCA AGGGA TTTTTTGCCCTTTGC EcSMS35_0758 766892 - 767185 + | cyd operon protein YbgE TERM 1023 767231 - 767206 - f 100 -12 -4.57341 | opp_overlap 767206 AATTCTCTTTAAAAA TTTATGGGCC GCTTCA GGCCCATAAA TTTTTACGCTCCCTT TERM 1024 767206 - 767231 + F 100 -12 -4.63184 | opp_overlap 767206 AATTCTCTTTAAAAA TTTATGGGCC GCTTCA GGCCCATAAA TTTTTACGCTCCCTT ybgC 767335 - 767739 + | tol-pal system-associated acyl-CoA thioesterase tolQ 767736 - 768428 + | protein TolQ tolR 768432 - 768860 + | protein TolR TERM 1025 769295 - 769278 - g 77 -3.4 -5.1244 | gap 1, overlap 769281 TCAGGAACAGAAAAA GCAGGCT GAAGA AGCC-GC AAAACAGGCCGAGTT TERM 1026 769496 - 769480 - g 100 -9.3 -5.27923 | GAAGCGCAGAAAAAA GCCGAGG CAG CCGCGGC GGCACTGAAGAAGAA TERM 1027 769538 - 769513 - g 70 -4.5 -4.46854 | overlap 769528 769529 GCACTGAAGAAGAAA GCGGAAGCGGC AGAA GCAGCTGCAGC TGAAGCAAGAAAGAA TERM 1028 769658 - 769636 - g 72 -6.2 -4.32177 | overlap 769618 769617 769637 GCAGCTGATAAGAAA GCGGCAGC AGAGAAA GCTGCAGC CGACAAAAAAGCAGC TERM 1029 769688 - 769669 - g 87 -4.9 -5.26316 | overlap 769670 769681 769682 GCAGCCGACAAAAAA GCAGCAG AAAAAG CGGCTGC TGAAAAGGCAGCAGC TERM 1030 769703 - 769681 - g 83 -6.2 -4.95806 | overlap 769669 769670 769682 769699 AAAGCAGCAGAAAAA GCGGCTGC TGAAAAG GCAGCAGC TGATAAGAAAGCAGC TERM 1031 769736 - 769714 - g 90 -9.8 -4.32177 | overlap 769699 769729 GCAGCTGATAAGAAA GCAGCGGC AGAAAAA GCCGCCGC AGACAAAAAAGCGGC TERM 1032 769754 - 769729 - g 85 -6.8 -4.84359 | overlap 769714 769747 769748 769749 GCAGCGGCAGAAAAA GCCGCCGC AGACAAAAAA GCGGCAGC TGCAAAAGCGGCAGC TERM 1033 769772 - 769747 - g 95 -5.9 -5.36441 | overlap 769729 769748 769749 769762 GCCGCAGACAAAAAA GCGGCAGCTGC AAAA GCGGCAGCTGC AAAAGCAGCAGCTGA TERM 1034 769814 - 769762 - g 95 -12.6 -4.11216 | opp_overlap 769807, overlap 769747 769749 769748 769792 769807 769808 GCGGCAGCTGCAAAA GCGGCAGCTGCAAAAGCAGCAGCT GAAAA AGCCGCTGCAGCAAAAGCTGCCGC AGAGGCAGATGATAT TERM 1035 769820 - 769792 - g 100 -13.1 -4.63527 | opp_overlap 769807, overlap 769762 769807 769808 GCAGCAGCTGAAAAA GCCGCTGCAGCAA AAG CTGCCGCAGAGGC AGATGATATTTTCGG tolA 768925 - 770205 + | protein TolA tolB 770335 - 771630 + | beta-propeller repeat-containing to-pal system protein TolB pal 771665 - 772186 + | peptidoglycan-associated lipoprotein TERM 1036 772200 - 772241 + G 74 -11.1 -3.25823 | gap 1, opp_overlap 772207 772210, overlap 772201 772203 772207 AAGAGAATTGCATGA GCAGTAACTACAGACATCAA CTA TTGA-GTCTGTCGTTACTGG TTGGTATAGCGGCCC TERM 1037 772201 - 772240 + G 90 -14.6 -2.55351 | gap 1, opp_overlap 772207 772210, overlap 772200 772203 772207 AGAGAATTGCATGAG CAGTAACTACAGACATCAA CTA TTGA-GTCTGTCGTTACTG GTTGGTATAGCGGCC TERM 1038 772203 - 772238 + G 73 -11.4 -2.81547 | gap 1, opp_overlap 772207 772210, overlap 772201 772200 772207 AGAATTGCATGAGCA GTAACTACAGACATCAA CTA TTGA-GTCTGTCGTTAC TGGTTGGTATAGCGG TERM 1039 772250 - 772266 + G 100 -15.1 -4.25104 | TTACTGGTTGGTATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCACC TERM 1040 772448 - 772435 - g 70 -5.3 -4.29738 | TCAGATTCAGGAAAA TCAGT ATCA ACTGA ATCAGGTCGTGGAGC ygbF 772196 - 772987 + | tol-pal system protein YbgF TERM 1041 773031 - 772995 - f 77 -10.3 -3.4285 | gap 1, opp_overlap 772999, overlap 772988 CGATGTAATGCATAA CG-CACGACCAGAAGT CGCATT ATTTCTGGTCGTGTCG TGCGAATCATAAGCA TERM 1042 772999 - 773026 + F 74 -10.7 -2.79302 | opp_overlap 772995 GTAATGCATAACGCA CGACCAGAAGT CGCATT ATTTCTGGTCG TGTCGTGCGAATCAT TERM 1043 773889 - 773857 - f 72 -9.9 -3.19463 | opp_overlap 773858 773866, overlap 773858 773866 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATTCAGGTATCCTCA TERM 1044 773858 - 773888 + F 89 -14.9 -3.08438 | opp_overlap 773857 773858 773866, overlap 773866 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATTCAGGTATCCTC TERM 1045 773888 - 773858 - f 84 -13.4 -2.51464 | opp_overlap 773858 773866, overlap 773857 773866 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATTCAGGTATCCTC TERM 1046 773866 - 773880 + F 95 -8.5 -5.27779 | opp_overlap 773858 773857 773866, overlap 773858 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATTCAG TERM 1047 773880 - 773866 - f 93 -9.2 -5.17576 | opp_overlap 773866 773858, overlap 773858 773857 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATTCAG nadA 774104 - 775147 + | quinolinate synthetase complex, A subunit TERM 1048 775895 - 775865 - g 100 -15.5 -3.15544 | CCGGATGTGGATCAA CAGCGCACGCGAA AGAGG TTCACGCGCGCTG TCCCATTAATGGTGA pnuC 775185 - 775904 + | nicotinamide mononucleotide transporter PnuC TERM 1049 776934 - 776915 - T 90 -9.3 -4.78661 | opp_overlap 776914 776915 AGGGAAAAATTAAAA GGGAGAG ACTCCG CTCTCCC ATTATTGGCTATTTC TERM 1050 776972 - 777011 + T 75 -8.6 -3.84644 | overlap 776973 TACTGCGTGGTACCG TCGGTTTTGGTATCGACA TCAT TGTTGATGCCATCACCGG TTTGGACTTTTTTAT TERM 1051 776973 - 777010 + T 70 -9.9 -2.8916 | overlap 776972 ACTGCGTGGTACCGT CGGTTTTGGTATCGACA TCAT TGTTGATGCCATCACCG GTTTGGACTTTTTTA EcSMS35_0776 777336 - 776956 - | hypothetical protein TERM 1052 777515 - 777527 + H 74 -3.3 -5.16071 | AGATCTCGTTTTTCG CGACA ATC TGGCG TTTTTCTTGCTAATT aroG 777652 - 778704 + | 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive TERM 1053 778761 - 778749 - T 71 -9.1 -3.30124 | overlap 778751 TTGCAGCCCTGATAA GACGC GCA GCGTC GCATCAGGCAATGTG TERM 1054 778806 - 778826 + T 80 -8.3 -4.2687 | opp_overlap 778806 ACGACAAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTTAAA TERM 1055 778826 - 778806 - T 100 -8.3 -5.73978 | opp_overlap 778806 ACGACAAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTTAAA gpmA 779604 - 778852 - | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase TERM 1056 778976 - 778962 - G 81 -9.2 -4.02132 | CGTCAAACTCATAAA CCAGCG GCA CGCCGG TCGGGATATTCAGCT TERM 1057 779294 - 779304 + g 78 -8.2 -4.1552 | TCGCCATACTTTTCA GCGG TTT CCGC TTTGTTCAGACCCTG TERM 1058 779472 - 779487 + g 74 -6.1 -4.45664 | overlap 779470 AACCTTCCTCTTTCA GCAGC TTACCT GCTGC TTTTGCTTCGCTTAC TERM 1059 779800 - 779784 - R 85 -10.1 -4.27467 | CAATATGAAGATAAA GCCCTCA TGA CGAGGGC TTAACATTACTCAGC galM 780847 - 779807 - | galactose mutarotase galK 781989 - 780841 - | galactokinase galT 783039 - 781993 - | galactose-1-phosphate uridylyltransferase TERM 1060 782594 - 782609 + g 75 -5.4 -4.59109 | opp_overlap 782592 782593, overlap 782592 782595 TTGTTTTCAAAGACC TGTACC CACG GGTACG TTTTTCCCAGCTCTG TERM 1061 782826 - 782842 + g 81 -6.5 -4.8667 | overlap 782827 TAGTGAAAACGTAAG TCCCGGT GTA ATCGGGG TTTTTATCGCCTGTC galE 784065 - 783049 - | UDP-glucose 4-epimerase TERM 1062 783303 - 783318 + g 77 -6.1 -4.67353 | TGTAGATGTGTACGC CTGGC TTGTTC GCCAG TTTTTCCATCGCTAC TERM 1063 783553 - 783570 + g 70 -4.1 -4.60041 | gap 1, overlap 783555 783556 GCGCAGCAGGGCAAT GCTCCAGT CCG GCTGG-GC TTTTTGCAGATCGGT modF 785799 - 784327 - | ABC transporter, ATP-binding protein TERM 1064 785360 - 785335 - G 86 -11.1 -3.90559 | opp_overlap 785355 ATCAAGAATCAACAA GTCAGGCTCCG ACAT CAGCGCCTGAC ACAGCAGGGTTTTTC modE 786655 - 785867 - | transcriptional regulator ModE TERM 1065 785957 - 785973 + g 81 -10.9 -3.57462 | CGCTTCATTTACCGG CACTGTG GCG CACAGTG TTTGCCCGTCGGGTA EcSMS35_0785 786784 - 786933 + | hypothetical protein TERM 1066 786943 - 786960 + F 100 -8.4 -5.35224 | CATTGATTCCCTGAA TGCCCG CTTAGT CGGGCA TTTTCTTTTTCTCAA TERM 1067 787725 - 787715 - g 72 -6.8 -4.17491 | AGCAAAGGGGTAAAA GTGG TTG CCAC CTTCCCGGAAGATTC modA 787100 - 787873 + | molybdate ABC transporter, periplasmic molybdate-binding protein modB 787873 - 788562 + | molybdate ABC transporter, permease protein modC 788565 - 789623 + | molybdate ABC transporter, ATP-binding protein TERM 1068 789636 - 789616 - T 74 -9.7 -3.2964 | AAAGTGTGTCGATAA CCGCCTGAT TAA ATCAGGTGG CTATAAATGAACTGG ybhA 790442 - 789624 - | phosphatase YbhA TERM 1069 791553 - 791539 - g 85 -7 -4.7373 | overlap 791541 CTACTGCATGAAAAA GGCCGC TAT GCGGTC GGGCAGGGACCAATG pgl 790597 - 791592 + | 6-phosphogluconolactonase TERM 1070 791605 - 791628 + T 93 -15.3 -3.10053 | TAACCGCTGATTTAC CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT EcSMS35_0791 792586 - 791633 - | LysR family transcriptional regulator TERM 1071 793796 - 793826 + G 71 -3.3 -4.81814 | opp_overlap 793796, overlap 793796 ACGACCAGAAAAATA TTTTCCGGTGAAG TTTAT CTTCCCTGAAAAA TTTTGTTGTCGTGAT EcSMS35_0792 792770 - 793822 + | hypothetical protein TERM 1072 793882 - 793862 - f 91 -11.3 -3.72532 | CAATCAATAAAGGAA TTCTGTATG AGT CATACAGAA AGAACAGGATATTAA TERM 1073 794164 - 794176 + G 70 -4.8 -4.51799 | TTACTCTTCCGGTAC CACC TGGCT GGTG TTTTCTGCGTTTACT EcSMS35_0793 793898 - 795331 + | anion transporter TERM 1074 795475 - 795498 + F 86 -13.2 -2.89055 | TCCATTTATTATCTT TCTGCGCACT TCAC GGTGCGCAGA TATCTGGAGCATTTG TERM 1075 795549 - 795535 - g 81 -7 -4.63184 | AAGTTATCTGAAAAA GGCGTG TTT CTCGCC AGTAATAACGAAATA TERM 1076 795627 - 795616 - g 93 -5.8 -5.2166 | opp_overlap 795616 GAAGAAGCCAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT EcSMS35_0794 795514 - 797775 + | aconitase family protein TERM 1077 797801 - 797781 - T 100 -11.2 -5.50499 | opp_overlap 797779 TCAGATGTAAAAAAA GGCGCTAT GAAAT ATAGCGCC CAGTTTCATTAACCC TERM 1078 797809 - 797840 + T 86 -2.2 -5.71638 | opp_overlap 797814, overlap 797814 ATAGCGCCCAGTTTC ATTAACCCGATGGT TCAG ACTATCGGGTTTTC TTTTTTTACTTCTTC TERM 1079 797814 - 797835 + T 100 -10.9 -5.57888 | opp_overlap 797814, overlap 797809 GCCCAGTTTCATTAA CCCGATGGT TCAG ACTATCGGG TTTTCTTTTTTTACT EcSMS35_0795 799129 - 797846 - | pectinesterase TERM 1080 799274 - 799248 - R 86 -13.8 -2.53759 | opp_overlap 799245, overlap 799253 799255 AATACCTTTAAGTGA TACCAGATGGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA EcSMS35_0796 799757 - 799281 - | phosphatidylethanolamine-binding protein bioA 801168 - 799816 - | adenosylmethionine-8-amino-7-oxononanoate transaminase TERM 1081 800131 - 800143 + g 76 -9.1 -3.78775 | opp_overlap 800130 800131 GCCAGATTCGAGAAT CGCCA GGC TGGCG TTTGCTGCTGCGCAG TERM 1082 802190 - 802164 - g 86 -10.8 -3.8591 | overlap 802167 GGCGATAACGAACAA CAGCAGCGTCTG GAG CAGGCGCTGATG ACCCCGGACACTGAC TERM 1083 802187 - 802167 - g 70 -11.1 -2.70018 | overlap 802164 GATAACGAACAACAG CAGCGTCTG GAG CAGGCGCTG ATGACCCCGGACACT bioB 801192 - 802232 + | biotin synthase TERM 1084 802272 - 802252 - g 76 -9.6 -3.77302 | overlap 802248 GCAGGAGAAAATCAA CGCGGCGC TCGAT GCGCGGCG TGCTGCCGATGCCCT bioF 802229 - 803383 + | 8-amino-7-oxononanoate synthase bioC 803370 - 804125 + | biotin biosynthesis protein BioC bioD1 804118 - 804795 + | dethiobiotin synthase TERM 1085 806182 - 806172 - g 72 -6.8 -4.18294 | GAAATTAAAGAAGAA CTGG CTG CCAG ACGCAAGGTGCTGTT TERM 1086 806225 - 806211 - g 75 -5.7 -4.67697 | overlap 806204 806213 TTGGAAAACAACAAA CTGCT GGAAG AGCAG CGGCTGACCCAGCGT uvrB 805374 - 807395 + | excinuclease ABC, B subunit TERM 1087 807433 - 807401 - T 78 -10.6 -3.21276 | opp_overlap 807404 807408, overlap 807404 807408 CGCGTCGTGACAAGA TGACGAAGCCGGAA TATTC TTCCGGCTTCGTGT TAACCTAAAGCCTGT TERM 1088 807404 - 807430 + T 100 -16.7 -3.05844 | opp_overlap 807401 807404 807408, overlap 807408 GTCGTGACAAGATGA CGAAGCCGGAA TATTC TTCCGGCTTCG TGTTAACCTAAAGCC TERM 1089 807430 - 807404 - T 100 -16.7 -2.80074 | opp_overlap 807404 807408, overlap 807401 807408 GTCGTGACAAGATGA CGAAGCCGGAA TATTC TTCCGGCTTCG TGTTAACCTAAAGCC TERM 1090 807408 - 807426 + T 76 -10.3 -3.37245 | opp_overlap 807404 807401 807408, overlap 807404 TGACAAGATGACGAA GCCGGAA TATTC TTCCGGC TTCGTGTTAACCTAA TERM 1091 807426 - 807408 - T 76 -10.3 -3.29381 | opp_overlap 807408 807404, overlap 807404 807401 TGACAAGATGACGAA GCCGGAA TATTC TTCCGGC TTCGTGTTAACCTAA EcSMS35_0803 808341 - 807433 - | hypothetical protein TERM 1092 808950 - 808936 - g 75 -5.6 -4.65895 | opp_overlap 808948, overlap 808938 CTGGGCACCGAAAAA GTCCGT CTG ACGGGC GGTGAGCCGTCTTTA moaA 808738 - 809727 + | molybdenum cofactor biosynthesis protein A moaB 809749 - 810261 + | molybdenum cofactor biosynthesis protein B moaC 810264 - 810749 + | molybdenum cofactor biosynthesis protein C moaD 810742 - 810987 + | molybdopterin converting factor, subunit 1 TERM 1093 811261 - 811271 + G 80 -5.4 -4.89852 | GGAATTATGGCCGGG CGAT GAA ATCG TTTTTGTCGGTGTCA moaE 810989 - 811441 + | molybdopterin converting factor, subunit 2 EcSMS35_0809 811578 - 812282 + | hypothetical protein TERM 1094 812303 - 812321 + F 100 -8.1 -6.13503 | opp_overlap 812301 812303 TTTTCACCATCAATA TCCCGGC CATGT GTCGGGA TTTTTTTTCTTACTA TERM 1095 812823 - 812836 + G 79 -2.3 -5.29782 | TCGTCGTATTCAGCA CAGCG GGCG CGATG TTTTTTATCAGTATG EcSMS35_0810 812489 - 813202 + | hypothetical protein EcSMS35_0811 814194 - 813238 - | hypothetical protein TERM 1096 813943 - 813957 + g 90 -11.4 -3.86015 | opp_overlap 813933 813931 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA EcSMS35_0812 815435 - 814194 - | putative cardiolipin synthetase EcSMS35_0813 816193 - 815432 - | endonuclease/exonuclease/phosphatase family protein TERM 1097 815485 - 815522 + g 77 -6.2 -4.62783 | gap 1, overlap 815488 815488 AAAGGTGTCGCCATG TCCGCAGCGGCAACGCG GTTGG CGCGCTGGCGCTG-GCA TTTTTGACGTAGATC TERM 1098 816633 - 816671 + G 72 -10.2 -3.29704 | overlap 816631 816631 816636 ACAACTTTTTGCTGG CAATTGCAGGGCTGGCAA TCC TTGCTGGCCCGGCGGTAG TGTCTTTGCTGGCGA TERM 1099 816636 - 816668 + G 70 -10.5 -2.82279 | overlap 816633 816631 816631 ACTTTTTGCTGGCAA TTGCAGGGCTGGCAA TCC TTGCTGGCCCGGCGG TAGTGTCTTTGCTGG EcSMS35_0815 816326 - 816736 + | hypothetical protein EcSMS35_0814 817804 - 816698 - | ABC-2 type transporter, permease protein TERM 1100 817630 - 817664 + g 70 -10 -3.21912 | GTTCCACCGAATGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTGGTCACTTCCAGC EcSMS35_0816 818948 - 817815 - | ABC-2 type transporter, permease protein EcSMS35_0817 820677 - 818941 - | ABC transporter, ATP-binding protein TERM 1101 820435 - 820456 + g 93 -8.7 -4.7373 | gap 1, opp_overlap 820429, overlap 820435 820437 CGGCATATAGCCGAG C-ACGGCGTG CAG CGCGCCGTCG TTTTTGATCGGATCA TERM 1102 820437 - 820453 + g 80 -11.5 -3.28472 | opp_overlap 820429, overlap 820435 820435 GCATATAGCCGAGCA CGGCGTG CAG CGCGCCG TCGTTTTTGATCGGA EcSMS35_0818 821665 - 820670 - | auxiliary protein membrane fusion protein family transporter TERM 1103 820786 - 820800 + g 70 -7 -4.1196 | opp_overlap 820771, overlap 820779 820771 GGTCGGTACGCAGAT CCGGCG TTT CGACGG TTTTCGGGGTAAATT EcSMS35_0819 822339 - 821668 - | TetR family transcriptional regulator TERM 1104 822282 - 822294 + g 81 -4.8 -5.09173 | opp_overlap 822268 ACTGTGCCAGTGCCG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 1105 822352 - 822375 + H 74 -9.8 -3.36878 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCCATAGG EcSMS35_0820 822568 - 823932 + | putative ATP-dependent RNA helicase RhlE TERM 1106 823940 - 823958 + F 100 -16 -3.01924 | opp_overlap 823933 CGCAGTAATCTTTTA TGCCGGGC GAT GCCCGGCA TATTCGCAACAAATC EcSMS35_0821 824089 - 824529 + | RelB/DinJ family addiction module antitoxin EcSMS35_0822 824529 - 824810 + | RelE/ParE family addiction module toxin TERM 1107 825236 - 825213 - g 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT GAGT ACCGCCAACG TGGCATTGCAGGATC EcSMS35_0823 824981 - 827131 + | putative ATP-dependent helicase DinG TERM 1108 827114 - 827127 + F 72 -9.5 -3.25223 | opp_overlap 827110 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 1109 827187 - 827214 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 827187 827185 827183 827206 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC EcSMS35_0824 827159 - 828121 + | glycosyl transferase family protein TERM 1110 828133 - 828156 + F 100 -12.5 -4.07568 | CTAATTCTTTTCTCA GCCGGATGA GCCATG TCATCCGGC TTTTACCCCACCGCA EcSMS35_0825 828262 - 829347 + | malate/L-lactate dehydrogenase TERM 1111 829375 - 829354 - T 100 -13.7 -5.81412 | GCCAGCTAAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT EcSMS35_0826 829747 - 829487 - | hypothetical protein TERM 1112 829563 - 829573 + g 74 -8.2 -3.8709 | TATCCACTGGCACCG GCCG CCG CGGC TTTCTCAGCCAGTTT TERM 1113 829620 - 829638 + g 71 -3.1 -4.79657 | overlap 829606 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 1114 829797 - 829812 + r 83 -4 -5.40072 | overlap 829798 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTACGAGAGA EcSMS35_0827 830278 - 830012 - | C4-type zinc finger DksA/TraR family protein EcSMS35_0828 831029 - 830352 - | 2OG-Fe(II) oxygenase family oxidoreductase TERM 1115 831063 - 831046 - R 100 -12.7 -4.58283 | CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ATCTGAATCAGAAAT fiu 833353 - 831071 - | catecholate siderophore receptor Fiu TERM 1116 831638 - 831658 + g 70 -3.9 -4.70879 | AACCTGCCATTTGGT GCCAATCTC GCT GGTGTTGGC TTTTTGCGGTTTAAA TERM 1117 832680 - 832695 + g 74 -2.4 -5.03145 | TTTTTGACTTTGTCG CGTCCG GCAT CGTGCG TTTTTTCGCCCATTA TERM 1118 833012 - 833002 - G 70 -6.8 -4.07124 | CACCACGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 1119 833063 - 833045 - G 81 -4.4 -5.03314 | opp_overlap 833053, overlap 833049 CTCACCCGCAAAAAA CGCACCCA CGC CGGGGACG TTTTTGAGCGCGTCG TERM 1120 833448 - 833493 + r 76 -6.4 -4.52857 | gap 1 ATCTCGTGATAGCGT TCGTG-CAAGTGATAATAATT TTGAT AAGCATTATCACTTGGCGCGA TTTTCTATCACCCAT TERM 1121 833603 - 833582 - R 74 -7.3 -4.29432 | opp_overlap 833582 CAAATCGGACGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT EcSMS35_0830 833878 - 833618 - | hypothetical protein TERM 1122 833686 - 833704 + g 71 -3 -4.86033 | overlap 833687 TAATGACATAACCTT TCGCGC CTTGTTC GCGCGC TTTTTCTGCCAGTTT TERM 1123 833860 - 833870 + g 71 -3.2 -4.77036 | CGGTGGCAATCAGTA GTGT GAG GCAC TTTTTCATAATGACA EcSMS35_0832 834154 - 835080 + | hypothetical protein EcSMS35_0831 837302 - 835077 - | small conductance mechanosensitive ion channel (MscS) family protein TERM 1124 837151 - 837164 + g 100 -4.5 -6.11243 | gap 1, overlap 837143 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTTGTTCGAT glnQ 838141 - 837419 - | glutamine ABC transporter, ATP-binding protein glnP 838797 - 838138 - | glutamine ABC transporter, permease protein glnH 839682 - 838936 - | glutamine ABC transporter, glutamine-binding periplasmic protein TERM 1125 839397 - 839434 + g 74 -3.4 -4.99134 | gap 1 TCGCTTTTTTACGCT CGTCGGTAATGGTGATG CCCGC CAGCGCCAG-ATCGACG TTTTTGGTTTGCAGT TERM 1126 839801 - 839791 - R 77 -6.8 -4.59109 | opp_overlap 839790 839791 GAGATGCGGTAAAAA CGTG ATG CACG ATTTATAGGGCAATA TERM 1127 839868 - 839826 - R 83 -12.8 -3.06315 | opp_overlap 839833 839867, overlap 839863 GCAATACCCTGAAGA TGCACCATTCTGGGGCACCA AAC TGGTGCGCTAAAATTGTGCA CTCAACACAGTGATT TERM 1128 839929 - 839910 - R 74 -3.6 -5.16237 | opp_overlap 839910 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATATGGAT TERM 1129 840023 - 840045 + r 77 -7.6 -4.40804 | opp_overlap 840024, overlap 840024 GGGCTGCAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGGGTACTA TERM 1130 840044 - 840024 - R 100 -13.3 -5.07652 | opp_overlap 840023 840024 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT TERM 1131 840024 - 840044 + r 78 -11.1 -3.24 | opp_overlap 840024, overlap 840023 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT dps 840589 - 840086 - | DNA protection during starvation protein TERM 1132 840493 - 840508 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTATC TERM 1133 840748 - 840762 + r 72 -5.8 -4.49556 | opp_overlap 840748 AGTTAGATATATTAA TAAGAA CAA TTCTTA TTTATTTGCTCGCCA TERM 1134 840879 - 840852 - R 100 -15.8 -4.45517 | opp_overlap 840848 AAAGTAGCGAGAAAA TCTGCATGGTTA TGCA TAACCATGCAGA AATGTAAATTTAATT rhtA 841776 - 840889 - | threonine/homoserine efflux transporter RhtA TERM 1135 841326 - 841304 - G 73 -9 -3.69373 | opp_overlap 841320 TAAATAGCCCAACAA GCCCCGGCCC CCA GAGCCAGCGC ACAGCCGGTTAAATC TERM 1136 841569 - 841555 - G 76 -7.8 -4.18164 | opp_overlap 841555 841557, overlap 841543 841564 841565 AACGCCGTAAAACAA CAGCAG TAA CCGCTG CTCTTTGGCAAAGCG TERM 1137 841968 - 841952 - H 79 -9.5 -3.72315 | opp_overlap 841951 841952, overlap 841950 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 842129 - 842644 + | outer membrane protein X TERM 1138 842660 - 842689 + T 91 -10.1 -4.70879 | opp_overlap 842666, overlap 842666 TCACTTCGGTGATAT AAAAAATCCGCCT CTCG GGGCGGATTTTTG TTTTTAAGGTTTCGG TERM 1139 842683 - 842666 - T 100 -8.4 -5.36441 | opp_overlap 842660 842666 CGGTGATATAAAAAA TCCGCC TCTCGG GGCGGA TTTTTGTTTTTAAGG TERM 1140 842666 - 842683 + T 100 -9.1 -5.61881 | opp_overlap 842666, overlap 842660 CGGTGATATAAAAAA TCCGCCT CTCG GGGCGGA TTTTTGTTTTTAAGG EcSMS35_0839 844276 - 842693 - | sulfatase family protein TERM 1141 843092 - 843117 + g 75 -4.7 -4.78077 | TAAATCGTCCGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTTGATTGCA TERM 1142 844247 - 844232 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGAGTCTTTG TERM 1143 844527 - 844550 + r 72 -8.1 -3.8709 | opp_overlap 844529, overlap 844529 ATAAAAGCAGGAGTG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCGGAAGGTTT TERM 1144 844548 - 844529 - R 76 -10.7 -3.12803 | opp_overlap 844527 844529 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT TERM 1145 844529 - 844548 + r 81 -10.7 -3.52113 | opp_overlap 844529, overlap 844527 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT EcSMS35_0840 844676 - 844548 - | hypothetical protein mntR 844862 - 845329 + | transcriptional regulator MntR TERM 1146 845587 - 845599 + G 70 -6.9 -4.04319 | overlap 845581 ATGTTTATGGTGCTG GCGGC GGC GCTGC TTTCTACCTTTCTGA EcSMS35_0842 845326 - 846444 + | citrate transporter family protein TERM 1147 846482 - 846464 - T 100 -7.4 -5.63517 | opp_overlap 846462 846460 846464 TGGCCAAATAAAAAA GGCGGA TGATGAG TCCGCC TCTGTTTTACGTTTT ybiS 847423 - 846503 - | YbiS protein EcSMS35_0844 847642 - 849234 + | ABC transporter, ATP-binding protein EcSMS35_0845 849307 - 849426 + | hypothetical protein EcSMS35_0846 850740 - 849475 - | hypothetical protein TERM 1148 849578 - 849588 + g 72 -4.6 -4.62069 | CGCGGGAAGTCGCCA GGTG ATG CGCC TTTTTCCAGTGCGGC TERM 1149 850120 - 850083 - G 74 -7.6 -4.08394 | opp_overlap 850118, overlap 850071 850084 AGACGTTGGCGAAAA CGCGCTGATACGCTGG AAGCAG CCAGCGTTCCAGTGCC CCGGAGTCGGTATGC TERM 1150 850119 - 850084 - G 72 -11.1 -3.04715 | opp_overlap 850118, overlap 850083 GACGTTGGCGAAAAC GCGCTGATACGCTGG AAGCAG CCAGCGTTCCAGTGC CCCGGAGTCGGTATG TERM 1151 850883 - 850865 - R 95 -11.7 -4.43173 | AAAAAGAAGGGAAAA CCGGAGC GCATG GCTCCGG TAGAGAGGTCAGCTG supH 851707 - 850892 - | sugar phosphatase SupH TERM 1152 851848 - 851818 - R 85 -13.2 -2.74012 | opp_overlap 851806 TGATGATGTGAATGA TTTAGCCCGGCGAC GCC GCCGCCGGGCTGAG GAGATTACAGCATAT EcSMS35_0848 854285 - 851853 - | formate C-acetyltransferase 3 TERM 1153 852140 - 852152 + g 71 -9.1 -3.53012 | opp_overlap 852138 CGCCGCCGAGAATCG CTGCC GTA GGCAG TTTACCCACCGAGCC TERM 1154 853802 - 853822 + g 71 -11.1 -2.87051 | opp_overlap 853781, overlap 853781 853801 CCAGGTGCGCATCGC CGGAGGTCA TAT TGCCCTCCG CTTTAATGATGCCGG TERM 1155 853836 - 853850 + g 71 -2.8 -4.77438 | opp_overlap 853832 CGCTTTAATGATGCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT EcSMS35_0849 855190 - 854291 - | glycyl-radical activating family protein TERM 1156 854556 - 854569 + g 79 -3.7 -5.11033 | ATGATGATTTTTTTC CCCGC CGCA GCGAG TTTTTTCAGATTATC TERM 1157 854627 - 854641 + g 76 -7.8 -4.18018 | opp_overlap 854624, overlap 854625 CCACTGTTTAAACGG CGCGTC GGC GACGTG TTTTAAATCGGCAAG fsaA 855321 - 855983 + | fructose-6-phosphate aldolase 1 TERM 1158 856016 - 856036 + T 81 -11.1 -3.50393 | TCATAAATTGCTGAT GACGTGGCG GAG TGCCGCGTC TTATCTGGCCTGGAG moeB 856808 - 856059 - | molybdopterin synthase sulfurylase MoeB TERM 1159 856147 - 856178 + g 83 -10.1 -4.0075 | overlap 856175 TACATCACGATTTTC CCGCTGGCTGGTT TGCCAT AACCTGCCAGCAG TTTGATTGCTTCCAT moeA 858043 - 856808 - | molybdopterin biosynthesis protein MoeA TERM 1160 857152 - 857140 - G 78 -10.5 -3.53444 | TCAGCGTTGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 1161 857346 - 857336 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGGGGATCGT TERM 1162 857510 - 857500 - G 87 -4.6 -5.252 | CACCGGTAGAAAAAA GCGC TAC ACGC ACTTTACGAATCACC TERM 1163 857952 - 857940 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG AAC CAGTG GCAGCGTTTCCTGGG TERM 1164 858228 - 858217 - H 70 -5.8 -4.36262 | overlap 858219 ATATTTATAGCAAAA GTGG CGAG CCAC CCTTAATGGACGAAT TERM 1165 858911 - 858925 + G 70 -5.6 -4.30719 | opp_overlap 858912, overlap 858912 GATGCTACGCCAATA ACGCCA GTG TGGCGG TTTCTTGTACCGGCA TERM 1166 858924 - 858912 - g 73 -9.1 -3.65224 | opp_overlap 858912 858911 ATGCTACGCCAATAA CGCCA GTG TGGCG GTTTCTTGTACCGGC EcSMS35_0853 858247 - 859212 + | L-asparaginase TERM 1167 859727 - 859703 - g 77 -11.4 -3.15544 | opp_overlap 859699 859717 CGTTATCCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG gsiA 859199 - 861070 + | glutathione ABC transporter, ATP-binding protein GsiA TERM 1168 862558 - 862542 - g 71 -3 -4.82901 | gap 1, overlap 862544 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG gsiB 861090 - 862628 + | glutathione ABC transporter, periplasmic glutathione-binding protein GsiB TERM 1169 863471 - 863483 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT gsiC 862646 - 863566 + | glutathione ABC transporter, permease protein GsiC gsiD 863569 - 864480 + | glutathione ABC transporter, permease protein GsiD TERM 1170 864619 - 864591 - f 80 -7.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACTATT TTGCAGCGGC ACAGCGTTCAGACAG TERM 1171 866174 - 866147 - g 70 -5.5 -4.431 | GAGTTACGCAGAAAA GCTGAAACTGG CGATTT CCAGTATCCGC AACCATATGTTCTCA TERM 1172 866341 - 866320 - g 74 -10.8 -3.19602 | opp_overlap 866317, overlap 866318 866321 TCGTTGATATTAACA CCCGCGCC ATTCTG GGCGCGGA GGCGTTGTGCCGTTG TERM 1173 866340 - 866321 - g 76 -12.1 -2.51547 | opp_overlap 866317, overlap 866320 866318 CGTTGATATTAACAC CCGCGCC ATTCTG GGCGCGG AGGCGTTGTGCCGTT EcSMS35_0858 864657 - 867005 + | cyclic diguanylate phosphodiesterase domain-containing protein TERM 1174 867044 - 867055 + F 75 -4.4 -4.95806 | overlap 867053 AATTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT TERM 1175 867533 - 867514 - g 74 -7.8 -4.11216 | opp_overlap 867528 TCTTTACTGTCAAAA TCGCTGGC GATG GACAGCGA GAACCTGATGTTCTC TERM 1176 867578 - 867568 - g 72 -8.2 -3.72051 | overlap 867561 TTTAAGAACGGTAAA CCGG TGA CCGG TGATGAATATAATGC EcSMS35_0859 867115 - 868341 + | diguanylate cyclase EcSMS35_0860 868740 - 868411 - | DNA-binding protein TERM 1177 868467 - 868479 + g 86 -6.9 -4.99947 | TCAAAATACGTAATG CCGGG CCG CTCGG TTTTATTTCATTACG EcSMS35_0861 869116 - 868730 - | hypothetical protein EcSMS35_0862 870667 - 869342 - | MiaB-like tRNA modifying enzyme YliG TERM 1178 870647 - 870635 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 870880 - 871263 + | biofilm regulator BssR TERM 1179 871259 - 871303 + F 75 -5 -4.84359 | opp_overlap 871267 871271, overlap 871267 871268 871271 CTATGCTTGAGAAGG CCTGAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 1180 871295 - 871267 - f 81 -9.6 -4.12198 | opp_overlap 871267 871259 871268 871271, overlap 871271 GAGAAGGCCTGAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1181 871268 - 871295 + F 75 -9.3 -3.59063 | gap 1, opp_overlap 871267 871271, overlap 871267 871259 871271 AGAAGGCCTGAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1182 871271 - 871291 + F 93 -12.6 -3.48703 | opp_overlap 871267 871271, overlap 871268 871267 871259 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1183 871291 - 871271 - f 95 -12.6 -3.67175 | opp_overlap 871271 871268 871267 871259, overlap 871267 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1184 871839 - 871851 + G 77 -2.7 -5.16841 | CGGCTGGTATTCGAC GGTAA AGG TTATC TTTTTATTGCTCTGG TERM 1185 872135 - 872120 - g 71 -2.4 -4.92239 | overlap 872124 GCAAAAAGGCAAAAA CTACGG CTGG CCGCTG GCAACCTGGGGAATC EcSMS35_0865 871374 - 872489 + | glucose / sorbosone dehydrogenase protein EcSMS35_0864 873112 - 872486 - | glutathione S-transferase family protein TERM 1186 873391 - 873406 + G 87 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT dacC 873350 - 874561 + | serine-type D-Ala-D-Ala carboxypeptidase TERM 1187 874597 - 874573 - T 85 -12.1 -3.30159 | opp_overlap 874573 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT TERM 1188 874573 - 874597 + T 100 -13.6 -3.39862 | opp_overlap 874573 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT deoR 875366 - 874608 - | deoxyribose operon repressor TERM 1189 875118 - 875129 + g 79 -3.6 -5.06414 | overlap 875120 CGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG EcSMS35_0868 876020 - 875424 - | undecaprenyl-diphosphatase TERM 1190 875802 - 875792 - G 72 -5.4 -4.56597 | GGTCGTGCGGAAAAA GATG CCC CATC GTCCAGGACACAAAC mdfA 876305 - 877537 + | multidrug translocase MdfA TERM 1191 877543 - 877569 + T 95 -13.1 -3.37464 | opp_overlap 877543 CGAAGGGTAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCAAATTAATGG TERM 1192 877569 - 877543 - T 100 -10.9 -5.47399 | opp_overlap 877543 CGAAGGGTAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCAAATTAATGG EcSMS35_0870 877856 - 877578 - | hypothetical protein ybjI 878763 - 877948 - | phosphatase YbjI EcSMS35_0872 879971 - 878763 - | major facilitator transporter TERM 1193 879551 - 879538 - G 71 -3.1 -4.85599 | gap 1 CCCAGGCTATAAAAA CCG-TG CAT CATCGG CAAAACCGTTTTATT EcSMS35_0873 880055 - 880591 + | TetR family transcriptional regulator TERM 1194 880712 - 880682 - T 72 -3.3 -4.97158 | gap 1, opp_overlap 880709 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG EcSMS35_0874 882451 - 880766 - | putative transporter TERM 1195 881350 - 881336 - G 83 -10 -4.09108 | opp_overlap 881335 881334 881332 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACGCG TERM 1196 881616 - 881655 + g 72 -7.8 -3.85817 | GGATCGAGTCGGGCG TGGGCGTCGGGATAGCCT ACCA ACGCTATTTCATCGCCCA TTTGTAGCACGGCAT EcSMS35_0875 882721 - 883098 + | hypothetical protein TERM 1197 883124 - 883092 - T 81 -3.3 -5.40625 | opp_overlap 883100, overlap 883100 ACAGCACAGAAAAAA TCAATAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 1198 883116 - 883100 - T 89 -10.1 -4.54301 | opp_overlap 883100, overlap 883092 GAAAAAATCAATAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG TERM 1199 883100 - 883116 + T 74 -9.4 -3.29511 | opp_overlap 883100 883092 GAAAAAATCAATAAA GCCCTC AACGC GAGGGC TTGTCAGACGATCAG grxA 883385 - 883128 - | glutaredoxin EcSMS35_0877 883545 - 883832 + | hypothetical protein nfsA 883816 - 884538 + | oxygen-insensitive NADPH nitroreductase TERM 1200 885061 - 885118 + G 95 -14.2 -3.40522 | gap 1, opp_overlap 885083, overlap 885063 885064 885083 GGCGTCGTGCTGGCG GAGACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCATA TTCTGGTGCAGGAAT TERM 1201 885063 - 885116 + G 100 -16.8 -3.27475 | gap 1, opp_overlap 885083, overlap 885061 885064 885083 CGTCGTGCTGGCGGA GACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 1202 885064 - 885115 + G 100 -20.3 -2.56271 | gap 1, opp_overlap 885083, overlap 885063 885061 885083 GTCGTGCTGGCGGAG ACGCG-TCAGGCGGCGGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 884599 - 885501 + | ribosomal protein S6 modification protein EcSMS35_0880 885589 - 886065 + | TPR repeat-containing protein TERM 1203 886119 - 886070 - gf 70 -10.1 -2.61264 | gap 1, opp_overlap 886073 886073, overlap 886069 TCCTCCACTGATAAC TCCTTTCG-AGCACGCAGTCGCTG GTG CAGTGACTGCGCGCTGCAAAATTA TCTGCTGTTTTTAAT TERM 1204 886073 - 886116 + GF 100 -14 -3.65046 | gap 1, opp_overlap 886070 886069, overlap 886073 TCCACTGATAACTCC TTTCG-AGCACGCAGTCGCTG GTG CAGTGACTGCGCGCTGCAAAA TTATCTGCTGTTTTT TERM 1205 886073 - 886115 + GF 87 -14.2 -2.77401 | opp_overlap 886070 886069, overlap 886073 TCCACTGATAACTCC TTTCGAGCACGCAGTCGCTG GTG CAGTGACTGCGCGCTGCAAA ATTATCTGCTGTTTT EcSMS35_0881 886022 - 886144 + | hypothetical protein TERM 1206 886302 - 886313 + F 71 -4.4 -4.63218 | AGCAGTGCTGGCCGG GAGA GAGT TCTC TTTTCTTACACCGCG TERM 1207 886358 - 886340 - f 77 -3.2 -5.24129 | opp_overlap 886340 CGCGCCGATAAAAAA TATGCA CGTTTAT TGCATA TCTTTCAGTGTGACA TERM 1208 886380 - 886397 + F 71 -8.5 -3.53012 | AGTGTGACAACTTTT GTTCGTT TGTT AACGAAC TTTCAGAAGGAAAGA potF 886416 - 887528 + | putrescine ABC transporter, periplasmic putrescine-binding protein TERM 1209 888190 - 888171 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 887623 - 888756 + | putrescine ABC transporter, ATP-binding protein potH 888766 - 889719 + | putrescine ABC transporter, permease protein PotH TERM 1210 890257 - 890267 + G 71 -3.2 -4.81083 | ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTCGTCATTACG potI 889716 - 890561 + | putrescine ABC transporter, permease protein PotI TERM 1211 890591 - 890615 + F 95 -12.2 -4.25104 | opp_overlap 890594, overlap 890594 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG TERM 1212 890594 - 890612 + F 95 -11.7 -4.25256 | opp_overlap 890594, overlap 890591 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG TERM 1213 890612 - 890594 - f 88 -11.7 -3.48772 | opp_overlap 890591 890594 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG EcSMS35_0886 890621 - 891109 + | hypothetical protein TERM 1214 891549 - 891565 + G 70 -4.3 -4.48741 | opp_overlap 891538, overlap 891550 GAAAGCCAGAGCGAT GGCGGCA TGA TGCTGCG TTTTGTACTGCGTTC rumB 891150 - 892277 + | 23S rRNA (uracil-5-)-methyltransferase RumB TERM 1215 892282 - 892295 + T 81 -9.5 -3.98172 | opp_overlap 892282 TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTTCTGAATCTTACT TERM 1216 892295 - 892282 - T 100 -9.5 -5.5604 | opp_overlap 892282 TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTTCTGAATCTTACT artJ 893037 - 892306 - | arginine ABC transporter, periplasmic arginine-binding protein ArtJ TERM 1217 892655 - 892679 + g 77 -7.2 -4.49781 | opp_overlap 892655 TTTTCCATCCCAATA CGTTTGCC TTTCAGATC GGCAAACG TTTTGTAGGTATTTT TERM 1218 893186 - 893160 - R 100 -10.9 -6.01187 | opp_overlap 893160 AATGAAATAAAAAAA GACGGACAGCT TAGTG AGTTGTCCGTC TTCATTATAAGAATT TERM 1219 893160 - 893186 + r 100 -13.8 -3.4489 | opp_overlap 893160 AATGAAATAAAAAAA GACGGACAGCTT AGT GAGTTGTCCGTC TTCATTATAAGAATT artM 893931 - 893263 - | arginine ABC transporter, permease protein ArtM artQ 894647 - 893931 - | arginine ABC transporter, permease protein ArtQ TERM 1220 894603 - 894593 - G 74 -8.2 -3.99898 | opp_overlap 894599, overlap 894594 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 895385 - 894654 - | arginine ABC transporter, periplasmic arginine-binding protein ArtI artP 896131 - 895403 - | arginine ABC transporter, ATP-binding protein TERM 1221 896318 - 896290 - R 79 -9 -3.96148 | gap 1, opp_overlap 896289 896290 GTCGGCGAGCATAAA TGT-CGGCATTCC TCAC GAAATGCCGGACA ATTTACGGAGTTTAT EcSMS35_0893 896864 - 896349 - | putative lipoprotein TERM 1222 896629 - 896654 + g 72 -7.5 -3.92373 | TGACTGTTATCGCGG CTGGCATCGCT AAGT AGGGTTGCCAG TTTGTCACTCAAATA TERM 1223 898325 - 898310 - g 74 -3.2 -4.88405 | opp_overlap 898310 AATTTTGAAACAAAA CCTGTT CATT ATCAGG ATTTATTAACACGAT EcSMS35_0894 897479 - 899281 + | hypothetical protein EcSMS35_0895 899492 - 899815 + | hypothetical protein amiD 899812 - 900642 + | N-acetylmuramoyl-L-alanine amidase AmiD EcSMS35_0896 901688 - 900639 - | NAD-dependent epimerase/dehydratase family protein TERM 1224 900775 - 900803 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGACGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG EcSMS35_0898 903181 - 901751 - | NAD dependent epimerase/dehydratase family protein TERM 1225 901875 - 901844 - G 72 -5.9 -4.36411 | gap 1, overlap 901847 CAGTAACCAGTAAAA CAGCCCCGGCATCC CGTGC GGATGCCAGAA-TG CGCGAACATCGATAG TERM 1226 901961 - 901972 + g 72 -4.4 -4.59773 | opp_overlap 901961 TTTCATGCCAAATAA CAAC GCAA GTTG TTTTTCCGGCTCGAC TERM 1227 902267 - 902282 + g 81 -6.1 -4.81163 | GTCGTATCCCCAGTC GCTGG AGTTGA CCAGC TTTTCTTCCTCTTTC TERM 1228 903247 - 903207 - R 74 -10.3 -3.15579 | gap 1 TTAACGCGCCAGGAA TGCGCGC-CAGTGGGCGG CGACTT CCGCCAGCTGAGCGCGCG AGACGTCAAGATGCG ltaE 904193 - 903192 - | low-specificity L-threonine aldolase poxB 905948 - 904230 - | pyruvate dehydrogenase (cytochrome) TERM 1229 906071 - 906046 - R 85 -11.9 -3.36694 | overlap 906044 ACTTACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATCAGGCGATTATGC hcr 907049 - 906081 - | NADH oxidoreductase hcr TERM 1230 906237 - 906221 - G 77 -10.1 -3.5882 | overlap 906213 TACAGCAGCCGCAAA CACCTGC GCG GCAGGCG GCGACAACCGGAACG TERM 1231 906687 - 906675 - G 70 -10.5 -2.71119 | overlap 906674 ACGCATCGACATAAT CGGCG TAA CGCCG CAGCCTGCCGCCAGC hcp 908713 - 907061 - | hydroxylamine reductase TERM 1232 908519 - 908507 - G 71 -3.3 -4.83615 | overlap 908508 CAGGGTTGAGAAAAA GGCAC GTG GTGCA AAGCTGTCTACATCG TERM 1233 908887 - 908872 - R 72 -3.2 -4.99035 | overlap 908874 TTATGCAGAGAAAAA GGCGAT GAGG ATCGGC ACTAACAGGCTAAGA EcSMS35_0903 909756 - 908857 - | hypothetical protein EcSMS35_0904 910096 - 911121 + | IS110 family transposase TERM 1234 911146 - 911104 - f 90 -12.7 -3.39187 | overlap 911127 AATACTGAATATCAA CCTCGGCAGCTCGCCTGAC ACAAG GTCAGTCAATCTGACGAGG TGCTGAAAAAAAGTT TERM 1235 911478 - 911517 + F 100 -20 -2.71364 | TTCGCCAGAGCCCGG GGGTGCAGGGGGCGGC GGCGATTG GCCGCCCCCTGCGCGC TCCTTGCGCCAGTGA TERM 1236 911932 - 911943 + G 71 -3 -4.83169 | overlap 911929 TGATTATTCCCCCAT GAAT CGTG ATTC TTTTTATCCAGCCAT TERM 1237 912877 - 912892 + G 70 -4.6 -4.46926 | GTTAAGCACTATTGA TGCGGC AAAA GCGGCA TTTTATCCTGACATC TERM 1238 913280 - 913294 + G 73 -9.2 -3.61398 | CCGGCGCTGCGTGAG CGGGCC AAT GGCCTG TTATTGCAAGGGCAG EcSMS35_0905 911930 - 913366 + | NodT family efflux transporter outer membrane lipoprotein EcSMS35_0906 913419 - 914180 + | putative 3-oxoacyl-[acyl-carrier-protein] reductase EcSMS35_0908 914190 - 914309 + | hypothetical protein TERM 1239 914304 - 914318 + T 80 -5.6 -5.06414 | GGGCAATGGTTTTAC GCCTGA TGA TCCGGC TTTTTCTTCCCGCGC EcSMS35_0907 914878 - 914300 - | hypothetical protein EcSMS35_0909 915048 - 915635 + | hypothetical protein TERM 1240 915648 - 915683 + F 100 -14.8 -3.75015 | overlap 915649 TAGAAAGTTCTTTTG CGCTGCATTGCTGGCG TAAA TGTCAGCAATGCAGCA TTTCCTCACGATTCT TERM 1241 915649 - 915682 + F 100 -18.3 -2.84527 | overlap 915648 AGAAAGTTCTTTTGC GCTGCATTGCTGGCG TAAA TGTCAGCAATGCAGC ATTTCCTCACGATTC TERM 1242 916196 - 916186 - g 81 -8.2 -4.3739 | opp_overlap 916192, overlap 916187 GATGTCTTCAGAAAA CCGC GCG GCGG CAAGCCTTGCGCACC TERM 1243 916713 - 916697 - g 100 -10.8 -5.8096 | TATAAAAAACAAAAA GCCGCC CAGAT GGCGGC GGCGGGGCAGACGGC pbpG 915800 - 916741 + | penicillin-binding protein 7 TERM 1244 916776 - 916747 - T 74 -10.1 -3.22409 | gap 1, opp_overlap 916747 916748, overlap 916750 GAACGATTAAGTGAA GTACGGATGGC-GA TAC TCTGCCATCCGTAA TTTTTACTCCACTTC TERM 1245 916747 - 916776 + T 91 -10.1 -4.74801 | gap 1, opp_overlap 916747 916750, overlap 916748 GAACGATTAAGTGAA GTACGGATGGC-GA TAC TCTGCCATCCGTAA TTTTTACTCCACTTC TERM 1246 916748 - 916775 + T 100 -13.6 -3.44158 | gap 1, opp_overlap 916747 916750, overlap 916747 AACGATTAAGTGAAG TACGGATGGC-GA TAC TCTGCCATCCGTA ATTTTTACTCCACTT TERM 1247 916773 - 916750 - T 79 -11.8 -2.79684 | gap 1, opp_overlap 916748 916747, overlap 916747 CGATTAAGTGAAGTA CGGATGGC-GA TAC TCTGCCATCCG TAATTTTTACTCCAC dld 918495 - 916780 - | D-lactate dehydrogenase TERM 1248 917762 - 917749 - G 70 -6.7 -4.01703 | opp_overlap 917748, overlap 917753 AGAAGATTCAAATAA CCGAT CCGG ATCGG CGTTATAACGTGCGG TERM 1249 919940 - 919918 - g 76 -4 -5.02074 | overlap 919919 919922 TTACCGCTGAAAAAA TCAGCCACCA TTG CGGTGGTTGG CCCGCTGGCAGACAG TERM 1250 920840 - 920822 - g 75 -6.6 -4.37658 | overlap 920833 AAGGCTTTGAGAAAA TCACCCTG AAA CCGGGCGA AACCCAGACCGTCAG TERM 1251 920890 - 920843 - g 74 -9.8 -3.56594 | opp_overlap 920850, overlap 920833 920844 TGAAACCGGGCGAAA CCCAGACCGTCAGCTTCCCGAT TGAT ATCGAGGCGCTGAAGTTCTGGA ATCAACAGATGAAAT TERM 1252 920889 - 920844 - g 70 -11.1 -2.73635 | opp_overlap 920850, overlap 920833 920843 GAAACCGGGCGAAAC CCAGACCGTCAGCTTCCCGAT TGAT ATCGAGGCGCTGAAGTTCTGG AATCAACAGATGAAA bglX 918691 - 920988 + | beta-glucosidase, periplasmic TERM 1253 921018 - 921000 - f 74 -10.2 -3.15579 | opp_overlap 921000 GTAATGCTTTAGCAA GGGCGCGA CGT TTGCGCCC TTTGCCTGATGTTCA TERM 1254 921000 - 921018 + F 100 -12.4 -3.71607 | opp_overlap 921000 GTAATGCTTTAGCAA GGGCGCGA CGT TTGCGCCC TTTGCCTGATGTTCA TERM 1255 921582 - 921569 - g 73 -3.8 -4.84529 | CGAGAAAGTCAAAAA GCTC GATGCA GAGC AAAACAAGTTAATCT TERM 1256 922080 - 922063 - g 79 -3.5 -5.14563 | gap 1, overlap 922074 GCCTCGATGAAAAAA CATTACAG CAA CTG-AATG CCAGCATTGCCGTTG EcSMS35_0913 921240 - 922157 + | quaternary amine ABC transporter periplasmic substrate-binding protein TERM 1257 922225 - 922235 + G 74 -8.2 -3.97368 | overlap 922190 TGACGGCAATCGCAG CGGC GCT GCCG TTTATCAGTTACGCG TERM 1258 922337 - 922351 + G 75 -5.6 -4.64676 | overlap 922339 GGGCGTATGTTGCGC CTGGCT GAC AGCCTG TTTTATTCCCGGTAG EcSMS35_0914 922164 - 923321 + | quaternary amine ABC transporter permease TERM 1259 923989 - 924012 + G 83 -5.2 -5.03715 | overlap 923985 923991 ACGATGCTGACTCGT CCGGCGAATG ATTT TGTTCGCCAG TTTTTTGGACGTAGT EcSMS35_0915 923314 - 924240 + | quaternary amine ABC transporter ATP-binding protein TERM 1260 924553 - 924577 + G 72 -8.5 -3.83026 | GCCCGTCGCGGTGCT GGCGATTGCCG TTC CGGTGATCGGC TTTGGTCTGCAACCC EcSMS35_0916 924245 - 924976 + | quaternary amine ABC transporter permease EcSMS35_0917 925855 - 925124 - | transcriptional regulator MlrA EcSMS35_0918 926077 - 927762 + | sensor histidine kinase EcSMS35_0919 927759 - 928478 + | DNA-binding response regulator EcSMS35_0920 928525 - 928995 + | hypothetical protein EcSMS35_0921 929497 - 929036 - | putative lipoprotein TERM 1261 929378 - 929404 + g 84 -8 -4.62392 | ATAGGTAATGGCAAT TTCAGTGCCGTT CAG ATTGGCGCTGAA TTTCTTTGATTCTTC TERM 1262 929543 - 929527 - R 81 -10.9 -3.46081 | opp_overlap 929523 TATTTAATCAAGGAA CTGGTGA CTC TCACCAG GGGCTATATAGGATA EcSMS35_0922 931622 - 929622 - | hypothetical protein TERM 1263 929762 - 929749 - G 75 -4.5 -4.85599 | opp_overlap 929753, overlap 929753 GCCAGCCGATAAAAA CCCAC CGCG GTGAG GTCATTCGCCAGCAA TERM 1264 929936 - 929953 + g 93 -8.3 -4.93296 | GCGCAGTTTCTGCGT CCAGCGC CCAG GCGCGGG TTTTTGTCATCATCA TERM 1265 931402 - 931370 - G 70 -5.5 -4.3208 | opp_overlap 931386 931388 GCTGATAACTTAAAA CCAGCATCACGCG ATGGCGG CACATGCCGCTGG CCCCGCAGCTGCATT TERM 1266 931574 - 931555 - G 70 -4.2 -4.63218 | opp_overlap 931565 931566 931569, overlap 931556 CTGCGTTTAACAAAA CCGGCATT GCTT AACGCCGT CAGGGCCTGCGGCGT EcSMS35_0923 932755 - 931619 - | von Willebrand factor type A domain-containing protein EcSMS35_0924 935027 - 932748 - | hypothetical protein EcSMS35_0925 936126 - 935038 - | AAA family ATPase TERM 1267 936281 - 936225 - R 82 -12.7 -2.92439 | opp_overlap 936230 936232 936237 936242 936245, overlap 936214 936232 936237 936245 AATATCTGGAAAGCA GATCACAGTAAATAAAAAAACCTGC TGGTGAG GCAGGTTCTTTTATTTACTATTTTC AGGCCCAACGCCGCA TERM 1268 936230 - 936276 + r 93 -11.9 -4.07568 | opp_overlap 936225 936232 936237 936245, overlap 936232 936237 936242 936245 CTGGAAAGCAGATCA CAGTAAATAAAAAAACCTGCT GGTGA GGCAGGTTCTTTTATTTACTA TTTTCAGGCCCAACG TERM 1269 936274 - 936232 - R 100 -16 -2.90725 | opp_overlap 936230 936232 936237 936242 936245, overlap 936225 936237 936245 GGAAAGCAGATCACA GTAAATAAAAAAACCTGC TGGTGAG GCAGGTTCTTTTATTTAC TATTTTCAGGCCCAA TERM 1270 936232 - 936274 + r 100 -14.5 -3.63744 | opp_overlap 936232 936225 936237 936245, overlap 936230 936237 936242 936245 GGAAAGCAGATCACA GTAAATAAAAAAACCTGCT GGTGA GGCAGGTTCTTTTATTTAC TATTTTCAGGCCCAA TERM 1271 936269 - 936237 - R 82 -10.1 -3.8766 | opp_overlap 936232 936230 936237 936242 936245, overlap 936232 936225 936245 GCAGATCACAGTAAA TAAAAAAACCTGC TGGTGAG GCAGGTTCTTTTA TTTACTATTTTCAGG TERM 1272 936237 - 936269 + r 78 -8.6 -4.07678 | opp_overlap 936237 936232 936225 936245, overlap 936232 936230 936242 936245 GCAGATCACAGTAAA TAAAAAAACCTGCT GGTGA GGCAGGTTCTTTTA TTTACTATTTTCAGG TERM 1273 936242 - 936264 + r 74 -4.1 -5.00923 | opp_overlap 936237 936232 936225 936245, overlap 936237 936232 936230 936245 TCACAGTAAATAAAA AAACCTGCT GGTGA GGCAGGTTC TTTTATTTACTATTT TERM 1274 936245 - 936261 + r 72 -5.8 -4.56436 | opp_overlap 936245 936237 936232 936225, overlap 936242 936237 936232 936230 CAGTAAATAAAAAAA CCTGCT GGTGA GGCAGG TTCTTTTATTTACTA TERM 1275 936261 - 936245 - R 100 -5.1 -5.99154 | opp_overlap 936242 936237 936232 936230 936245, overlap 936237 936232 936225 CAGTAAATAAAAAAA CCTGC TGGTGAG GCAGG TTCTTTTATTTACTA EcSMS35_0926 937022 - 936702 - | hypothetical protein TERM 1276 937075 - 937054 - R 87 -11.6 -3.61517 | opp_overlap 937053 937048 AGGTCGTGTTAATAA CGGGCAGT CGCATC ACTGCCCG CTGTGGTTTAATGGA EcSMS35_0927 940745 - 937083 - | molybdate metabolism regulator MolR-like protein TERM 1277 938329 - 938305 - G 72 -7.1 -4.19258 | opp_overlap 938294 938304, overlap 938306 AGATCCCAGGCAAAA GCTGCCAGC GTTTGTG GCTGGCAGA ACGTTTTCAGTTGTT TERM 1278 938328 - 938306 - G 72 -10.6 -3.11073 | opp_overlap 938294 938304, overlap 938305 GATCCCAGGCAAAAG CTGCCAGC GTTTGTG GCTGGCAG AACGTTTTCAGTTGT TERM 1279 939614 - 939627 + g 81 -4.5 -5.10767 | CATCTCGAGCTTTTT GCTGT GCAG GCAGC TTTTTGTCTTCGATG TERM 1280 940296 - 940255 - G 80 -11.7 -3.35679 | GTTTCTGAGCGATAA CCATAGCCATAGCCATAGC CATA GCCATAGCCATAGCCATAG TCCTCCTTCTGATAC TERM 1281 940601 - 940623 + g 70 -10.6 -2.80796 | opp_overlap 940599 940603, overlap 940600 940603 CAATGTGTAGCAATT CATCACCCAG TGT CTGGATGATG CTTTCAGTGATAACA molR 944543 - 940755 - | molybdate metabolism regulator MolR TERM 1282 941055 - 941072 + g 70 -5.5 -4.42386 | overlap 941057 ATTCGCCAGCCCCAT TACCCGA CCGC TCGGGCA TTTTCTGCCTGCCCA TERM 1283 942710 - 942684 - G 70 -3.7 -4.70659 | TTGCATAGGTAAAAA GGGAAGTGA GTTGAGATG CCACTCCCC CTGATACGGTGCATG TERM 1284 943222 - 943253 + g 100 -13.7 -3.84961 | AGTTCCGCCAGTGCT GCCAGTGCTGCGT GTGGGA ACGCAGCGCAGGC TTTCGTCATTCGATC TERM 1285 943940 - 943955 + g 70 -4 -4.67635 | overlap 943937 CCGCGAGTACAGCCA TTACCG GTGA TGGTAA TTTTGTCGTTTTCGG TERM 1286 944653 - 944672 + r 81 -11.4 -3.15758 | opp_overlap 944653 AATTTATAAAGAAAA GGCGCTGT CGAT GCAGCGCC TTGATGGGGGATTAT TERM 1287 944672 - 944653 - R 100 -10.7 -5.01553 | opp_overlap 944653 AATTTATAAAGAAAA GGCGCTG TCGATG CAGCGCC TTGATGGGGGATTAT metG 946717 - 944684 - | methionyl tRNA synthetase TERM 1288 944770 - 944793 + g 76 -7.5 -4.21194 | gap 1 CGGCAGCCATCACCA TGC-CTTCGG AGATA CCGAAGCGCA TTTTACGTGGTGCCA TERM 1289 946305 - 946318 + g 70 -3.8 -4.60487 | opp_overlap 946300 TTCACAAAACGGTCC GGCA GGAACA TGCC TTTTTCCGGATCGTA TERM 1290 946350 - 946367 + g 93 -8.5 -4.86731 | AGCTGAGAAATAGTG CGGTTTT TAAT AAAACCG TTTTCTTTCAGGCGA EcSMS35_0930 946849 - 947958 + | mrp protein TERM 1291 947988 - 948020 + F 91 -9.9 -4.85782 | opp_overlap 947992, overlap 948001 TTTGGTTGCTTTTCA TACACCGCAGAGATG TTA CATTGATGCGGTGTA TTTGTTTTTGCCGCA EcSMS35_0931 948221 - 948502 + | hypothetical protein TERM 1292 948566 - 948537 - f 86 -10.9 -3.92641 | opp_overlap 948537 AATCGGATTTAGAAA GCTGAAATCATTC GTGT GAATGATTTTAGC TTTTTTATTGATATA TERM 1293 948537 - 948566 + F 100 -13.1 -5.5353 | opp_overlap 948537 AATCGGATTTAGAAA GCTGAAATCATTC GTGT GAATGATTTTAGC TTTTTTATTGATATA EcSMS35_0932 948798 - 949340 + | fimbrial protein TERM 1294 949377 - 949398 + F 100 -12.3 -4.54727 | opp_overlap 949376 949374 949377 CCAGGTAATAAACAT GGCCGCTAT CCCC ATGGCGGCC TTTTAATTTAAGAGG TERM 1295 949398 - 949377 - f 71 -10.1 -2.81702 | opp_overlap 949377, overlap 949376 949374 CCAGGTAATAAACAT GGCCGCTAT CCCC ATGGCGGCC TTTTAATTTAAGAGG EcSMS35_0934 950111 - 952591 + | fimbrial usher protein TERM 1296 952894 - 952882 - g 79 -4.1 -5.14163 | ATGGACCAATAAAAA CAACA TCA CGTTG TCAAATACTCAGACC EcSMS35_0935 952607 - 953641 + | hypothetical protein TERM 1297 953697 - 953717 + T 95 -8.2 -5.42259 | overlap 953698 CAAGGTGTTTGCATT TCCCCCTC TCTCC GAGGGGGC TTTTTTTAGCGATGA TERM 1298 953698 - 953716 + T 93 -11.7 -3.84633 | overlap 953697 AAGGTGTTTGCATTT CCCCCTC TCTCC GAGGGGG CTTTTTTTAGCGATG EcSMS35_0936 954061 - 953723 - | hypothetical protein TERM 1299 954197 - 954179 - R 72 -7.4 -4.08919 | AAAGTGTAAATGAAA GGATGCCC TAA AAGCATCC TTAGCGAGCAGAGAG rcnA 955104 - 954280 - | nickel/cobalt efflux protein RcnA TERM 1300 954966 - 954998 + g 70 -4 -4.65895 | overlap 954969 CCTGTTTAATGGTGC CTTTGATGGCGATG ATAAA CGCCGCCATCATCG TTTTTGAGTGCCCCG rcnR 955225 - 955497 + | transcriptional repressor RcnR TERM 1301 956070 - 956058 - g 71 -3.3 -4.74103 | overlap 956059 GCCGCAAGGGAAAAA CGCAC ACT GTGCC GGGCATGGCTGGCTG TERM 1302 956223 - 956213 - g 72 -6.8 -4.15197 | CAAAGATTACATAAA GCTG GTG CAGC GTATGGATAAGCACA EcSMS35_0939 955827 - 957047 + | phage integrase family site specific recombinase EcSMS35_0940 957044 - 957898 + | hypothetical protein EcSMS35_0941 958002 - 958226 + | AlpA family transcriptional regulator TERM 1303 958273 - 958254 - g 100 -11.4 -4.85653 | GACATATAAAACAAA GACGACCG GGGG CGGTCGCC AATGGATACACACTA TERM 1304 958984 - 958936 - g 84 -3.9 -5.30448 | opp_overlap 958936 958937, overlap 958937 AAAGAAATACAAAAA GCCTTGACGTGTGTTTCATGC GCTCATA ACATGAAACACACCGAAAGGA TTGTTGAAATACAAA TERM 1305 959037 - 959006 - g 82 -11.6 -3.55033 | gap 1, overlap 959000 959002 AAATACAAAGAGCAA CGCCCCGCA-GTGCC GGA AACACATACGGGGCG TCTAACCACCAACGA EcSMS35_0942 958237 - 959055 + | hypothetical protein EcSMS35_0943 959075 - 959278 + | hypothetical protein EcSMS35_0944 959271 - 959591 + | hypothetical protein EcSMS35_0945 959598 - 959897 + | hypothetical protein TERM 1306 960297 - 960283 - g 86 -4.2 -5.45802 | GGCGGAAAAGAAAAA GGTAGT TGA ACTGCC TGTAAAGAAAAAAGA EcSMS35_0946 959894 - 961711 + | D5 family nucleoside triphosphatase EcSMS35_0947 961999 - 962244 + | hypothetical protein TERM 1307 962591 - 962574 - g 93 -8.3 -5.00616 | CCGGGCGGCAAAAAA GGCCAGC AGGG GCAGGCC ACTGACGCACTGAAC EcSMS35_0948 962241 - 962666 + | single-strand binding protein family EcSMS35_0949 962689 - 962931 + | hypothetical protein TERM 1308 962940 - 962961 + T 95 -7.2 -5.44119 | opp_overlap 962941, overlap 962941 ACGGTAAAATAATAA AGGCCTGG TAAAAT CCAGGCCA TTTTTTTACAGTAAG TERM 1309 962960 - 962941 - T 95 -10.7 -4.67697 | opp_overlap 962940 962941 CGGTAAAATAATAAA GGCCTGG TAAAAT CCAGGCC ATTTTTTTACAGTAA TERM 1310 962941 - 962960 + T 85 -10.7 -3.85748 | opp_overlap 962941, overlap 962940 CGGTAAAATAATAAA GGCCTGG TAAAAT CCAGGCC ATTTTTTTACAGTAA EcSMS35_0950 963473 - 962967 - | hypothetical protein EcSMS35_0951 963760 - 964929 + | HK97 family phage major capsid protein TERM 1311 964958 - 964943 - f 71 -10.4 -2.80195 | opp_overlap 964943, overlap 964940 AGTCATGAGTAAGGA GGAGGC TGCG GCCTCC TTTTTCAGCTTTATG TERM 1312 964943 - 964958 + F 91 -10.4 -4.72486 | opp_overlap 964940 964943 AGTCATGAGTAAGGA GGAGGC TGCG GCCTCC TTTTTCAGCTTTATG EcSMS35_0952 964984 - 965544 + | HK97 family phage prohead protease EcSMS35_0953 965546 - 966760 + | HK97 family phage portal protein EcSMS35_0954 966753 - 967055 + | DNA packaging, phage QLRG family protein EcSMS35_0955 967055 - 967495 + | HNH endonuclease family protein TERM 1313 967872 - 967850 - g 75 -4.7 -4.87291 | CAGTGGAAGGAAAAA TCGCGCCAG CTTTC CGGGCGGGA AGACCTTACCCCCGC EcSMS35_0956 967757 - 968140 + | P27 family phage terminase small subunit EcSMS35_0957 968124 - 969785 + | putative phage terminase, large subunit EcSMS35_0958 969791 - 970072 + | hypothetical protein TERM 1314 970255 - 970285 + T 79 -9.7 -3.85864 | gap 1, opp_overlap 970238, overlap 970258 GTTTCTCATATGTGA G-CACCGAGGGCGG AATT CCGCCTTCGGTTAC TTATTGTGCTCATGC TERM 1315 970258 - 970281 + T 100 -16 -3.59279 | opp_overlap 970238, overlap 970255 TCTCATATGTGAGCA CCGAGGGCGG AATT CCGCCTTCGG TTACTTATTGTGCTC TERM 1316 970497 - 970484 - T 71 -4.5 -4.71223 | opp_overlap 970484 970477 CCACAACACAGAAAA CCCAC GAAT ATGGG GTTTTTGTTATGGCA EcSMS35_0959 970723 - 970562 - | hypothetical protein thiM 970862 - 971650 + | hydroxyethylthiazole kinase TERM 1317 971992 - 971981 - g 77 -7.2 -4.57569 | opp_overlap 971981 971989, overlap 971982 TTATGCTGGCAAAAA GCGG CGAC CCGC TGCTTTCACCTTCGG TERM 1318 971981 - 971995 + G 73 -9.2 -3.66178 | opp_overlap 971981 971982, overlap 971989 TTATGCTGGCAAAAA GCGGCG ACC CGCTGC TTTCACCTTCGGCGG thiD 971647 - 972447 + | phosphomethylpyrimidine kinase EcSMS35_0962 972512 - 973330 + | glycosy hydrolase family protein TERM 1319 973433 - 973451 + G 78 -8.8 -4.25401 | AACGAACGTATTTTA GCGGCG GATAACA CGCCGC TTTATATTAAGTTTG TERM 1320 973514 - 973483 - g 83 -5.1 -5.12707 | gap 1, opp_overlap 973482 973483 CGAAACGGTAAAAAA TGCCGTGC-GCAGC GGGGT GCTGGAGCATGGCA ATATTTTGCCCGGTG TERM 1321 974067 - 974019 - g 93 -11 -4.39568 | opp_overlap 974019, overlap 974021 AGTTAGATAGCAAAA TACCGGTGCTGGTGATCAAGCA AGTGG CGCTTGACCAACAGCAACGGCC TATTGAGTACAGCAT TERM 1322 974065 - 974021 - g 100 -15.8 -3.79993 | opp_overlap 974019, overlap 974019 TTAGATAGCAAAATA CCGGTGCTGGTGATCAAGCA AGTGG CGCTTGACCAACAGCAACGG CCTATTGAGTACAGC EcSMS35_0964 973382 - 974128 + | GntR family transcriptional regulator EcSMS35_0963 975067 - 974102 - | PfkB family kinase TERM 1323 975000 - 974970 - G 80 -11.9 -3.33162 | gap 1, overlap 974989 CAGGGGAGGGCATAA GCGTCGGCGATCAC ATCA ATGACCGCCG-CGC CGACGACCATCACCG EcSMS35_0965 976068 - 975064 - | ADP-ribosylglycohydrolase family protein TERM 1324 975751 - 975763 + g 77 -3.3 -5.06414 | overlap 975745 CGCAATCTTCGAGGT CGGAC CTA GTACG TTTTTGTTAAAGGCG yegT 977342 - 976065 - | nucleoside transporter TERM 1325 976191 - 976158 - G 86 -12.5 -3.4727 | GAAAAAAATCATGAA CAGCACGGCGATAAT GGCA ATCATCACCGCGCCG AAAGTCCACATCCCG TERM 1326 976325 - 976358 + g 87 -4.5 -5.252 | overlap 976326 AGCAGAGCGTGATCA GCCCCTGCGCA GCGGTACGCATA TGCACGGGGGC TTTTTTATCGACATA TERM 1327 976564 - 976554 - G 72 -4.6 -4.65895 | overlap 976540 GCGTTTAGTGAAAAA CGGC AAT GCCA GCATAAAGAAGATTT TERM 1328 977319 - 977335 + g 85 -8.7 -4.56729 | opp_overlap 977319 977322 AACAAACATCATGAA CGACAGC TTT GCTGTTG TTTTCATCTTTTAAT TERM 1329 977498 - 977486 - H 76 -4.1 -5.08011 | overlap 977488 AAAACGCTGAAAAAA CATCC AAA AGATG GAAAAACTCGCCCGT fbaB 977599 - 978651 + | fructose-bisphosphate aldolase, class 1 TERM 1330 978736 - 978757 + F 100 -13.7 -5.83822 | ACGCGCACTTTGCTA CGGCTTCCC TAAC GGGAGGCCG TTTTTTTTGCCTGTA TERM 1331 979429 - 979448 + G 71 -3.4 -4.85599 | overlap 979428 979433 GCTCACGGTATGTAT GCCAGCGC ACCG GCGCTTGA TTTTTCTCGACTGGA EcSMS35_0968 978880 - 979734 + | tagatose bisphosphate family class II aldolase EcSMS35_0969 979763 - 981025 + | putative tagatose-6-phosphate kinase gatA 981035 - 981487 + | PTS system, galactitol-specific IIB component gatB 981518 - 981802 + | PTS system, galactitol-specific IIB component gatC 981806 - 983161 + | PTS system, galactitol-specific IIC component TERM 1332 984099 - 984075 - g 70 -9.9 -3.15544 | overlap 984078 TGGCAGTTGGATGAA CTACTCCAGCC CTT GGCCGGGGCAG GAGTGGGAAACGGCG gatD 983209 - 984249 + | galactitol-1-phosphate 5-dehydrogenase TERM 1333 984279 - 984252 - f 73 -9.1 -3.54424 | gap 1, opp_overlap 984252 984254 984255, overlap 984253 GCTCATTCCCTGAAA CCGCGGGCCAGC GTGAT GCTGGCCCG-GT ATTGTGCAAAACAGA TERM 1334 984278 - 984253 - f 82 -12.6 -2.72511 | gap 1, opp_overlap 984252 984254 984255, overlap 984252 CTCATTCCCTGAAAC CGCGGGCCAGC GTGAT GCTGGCCCG-G TATTGTGCAAAACAG TERM 1335 984254 - 984278 + F 93 -13.5 -3.21276 | opp_overlap 984253 984252, overlap 984252 984255 TCATTCCCTGAAACC GCGGGCCAGCG TGA TGCTGGCCCGG TATTGTGCAAAACAG TERM 1336 984255 - 984277 + F 100 -17 -2.52623 | opp_overlap 984253 984252, overlap 984254 984252 CATTCCCTGAAACCG CGGGCCAGCG TGA TGCTGGCCCG GTATTGTGCAAAACA TERM 1337 984506 - 984493 - g 74 -2.3 -5.06414 | opp_overlap 984494, overlap 984494 TTTCTCGAACAAAAA GGCGT GGTT ACGCG CTTTCATGGCGGTGC gatR 984349 - 985128 + | galactitol utilization operon repressor TERM 1338 985135 - 985179 + T 95 -13 -3.39595 | gap 1, opp_overlap 985151 ACGGTGTAGTATTGT TCTGTA-TGCCGGATAAGGTG TTTA CACCGCATCCGGCATTACGGA TTCTCCCTGGTTCAA EcSMS35_0975 986109 - 985210 - | diacylglycerol kinase catalytic subunit TERM 1339 985627 - 985641 + g 71 -2.7 -4.77757 | opp_overlap 985626 AATGATGTAAGAGAC GCCAC CCAGC GCGGC TTTTAATTTTTCCGG EcSMS35_0976 986564 - 986839 + | hypothetical protein TERM 1340 987035 - 987004 - T 95 -8.1 -5.37345 | overlap 986986 987007 CTTAAGCATAAAAAA TAAGCCCGTGTAA GGGAGA TTACACAGGCTAA GGAGGTGGTTCCTGG TERM 1341 987032 - 987007 - T 91 -9.8 -4.75967 | overlap 986986 987004 AAGCATAAAAAATAA GCCCGTGTAA GGGAGA TTACACAGGC TAAGGAGGTGGTTCC EcSMS35_0977 988530 - 987169 - | U32 family peptidase TERM 1342 987300 - 987310 + g 78 -8.2 -4.24948 | CGACCGGCATTGCTT CGCC TTT GGCG TTTTCCATATGCTCA TERM 1343 987826 - 987856 + g 74 -7.4 -4.07885 | AAACACTTTGTCGGT TGGCGCGCCGATGC CCA GCGTCGGCTCAACA TTTTGCACCGGAATC EcSMS35_0978 988929 - 988633 - | RelE/ParE family plasmid stabilization system protein EcSMS35_0979 989182 - 988931 - | CC2985 family addiction module antidote protein TERM 1344 989338 - 989316 - R 75 -4.9 -4.78326 | gap 1 TGGTAAACAAAGAAA GCAC-AACGA GTGC TCGTCAGTGC CCACTATTTTAATGG EcSMS35_0980 989768 - 989436 - | hypothetical protein baeR 990670 - 989948 - | DNA-binding response regulator BaeR TERM 1345 990038 - 990050 + g 78 -5.5 -4.81551 | overlap 990019 GTCGAGAGATTCCAG CTTGC GGC GCAGG TTTTTAATGTGGCTG TERM 1346 990236 - 990225 - G 70 -5.8 -4.15106 | CATGAAGCCTGAAAA CGAC CTTC GTCG ATAATCAACGGGCTT TERM 1347 990387 - 990399 + g 71 -3.4 -4.8048 | overlap 990376 AGCCCGAGCAGGCGG TCGA TCTCT TCGA TTTTTGCTGTCACCA baeS 992070 - 990667 - | sensor histidine kinase BaeS mdtD 993482 - 992067 - | multidrug resistance protein mdtD mdtC 996560 - 993483 - | multidrug resistance protein MdtC TERM 1348 993785 - 993801 + g 77 -3 -5.07486 | gap 1, opp_overlap 993785 993788, overlap 993788 CTTCAAGCGCAAAAT CGACCAT CATA ATGG-CG TTTTTCTTCACGATG TERM 1349 995829 - 995851 + g 78 -7.6 -4.30416 | opp_overlap 995828 995831, overlap 995808 995828 995831 GTTGTAATGAATAAT CAGCGGCTGA TAT TCAGCGGCAG TTTTCAGTTCGTCAT TERM 1350 996086 - 996034 - G 79 -12.7 -3.01924 | opp_overlap 996042 996043 996044 GAGCTGCCGCCAACA TCGACATCACCGACACCGTCGATTT GCG AAATCGTCGGAGCCAGCTGTGTCGA GGCGAAATCGTACAG mdtB 999683 - 996561 - | multidrug resistance protein MdtB TERM 1351 997584 - 997574 - G 70 -6.8 -4.04318 | opp_overlap 997567 TGGAGACATCAGAAA GCTG TGG CAGC TGCTGGAGTTTTTCC TERM 1352 998387 - 998399 + g 81 -6.2 -4.7657 | overlap 998396 CCGCGCCCTTGAGCG CCGC CGCCA GCGG TTTTTCGCCTTTTTC TERM 1353 999658 - 999639 - G 72 -6.4 -4.33819 | opp_overlap 999641 AGGACGCATAATAAA CAGGCG CGACGGGC CGCCTG TGCTGCTCGGGGGTA TERM 1354 999686 - 999697 + r 80 -5.8 -5.09173 | opp_overlap 999677 GTAACACCTGCATCA GGAG CGTG CTCC TTTTTTCGCGTATTC mdtA 1000930 - 999683 - | multidrug resistance protein MdtA TERM 1355 1001189 - 1001170 - H 91 -11.4 -3.71649 | opp_overlap 1001169, overlap 1001163 CGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTAAATAAGGAAAG TERM 1356 1001507 - 1001491 - H 72 -8.7 -3.57263 | opp_overlap 1001497 1001498, overlap 1001498 AGCGGGACGCTGAAA CGGGAAA CCC TCTCCCG GAGAAGAGGGCTTTT TERM 1357 1001517 - 1001498 - H 80 -10 -3.71649 | opp_overlap 1001498 1001497, overlap 1001491 CGCTGAAACGGGAAA CCCTCTCC CGGA GAAGAGGG CTTTTAATAAGGAAA TERM 1358 1002007 - 1001997 - g 72 -5.4 -4.56597 | CGCTGGCCTTAAAAA GAGT GGA ACTC GGTATTGTGACGTTC EcSMS35_0987 1001819 - 1002478 + | von Willebrand factor type A domain-containing protein EcSMS35_0988 1002556 - 1003236 + | hypothetical protein TERM 1359 1003244 - 1003275 + T 71 -8.8 -3.55761 | opp_overlap 1003240 1003261, overlap 1003245 CAGAATGAACATCGC ATGGCGGTTGAA GACAACGG TTCAACCGCCAG TTTAAGCAATCAATA TERM 1360 1003245 - 1003274 + T 82 -12.3 -2.73243 | opp_overlap 1003240 1003261, overlap 1003244 AGAATGAACATCGCA TGGCGGTTGAA GACAACGG TTCAACCGCCA GTTTAAGCAATCAAT EcSMS35_0989 1003822 - 1003301 - | hypothetical protein TERM 1361 1005915 - 1005875 - g 81 -6.1 -4.83615 | gap 1, opp_overlap 1005876, overlap 1005876 CAGGCGGCAGAAAAA CTGGCTCAGGCGCAGGCT GATTTA AGCC-GCTGCTGAGCCAT TTTTCAATTAACGAA TERM 1362 1005876 - 1005914 + G 95 -9.6 -4.74103 | gap 1, opp_overlap 1005875 1005876 AGGCGGCAGAAAAAC TGGCTCAGGCGCAGGCT GATTTA AGCC-GCTGCTGAGCCA TTTTTCAATTAACGA TERM 1363 1005914 - 1005876 - g 71 -9.6 -3.49687 | gap 1, opp_overlap 1005876, overlap 1005875 AGGCGGCAGAAAAAC TGGCTCAGGCGCAGGCT GATTTA AGCC-GCTGCTGAGCCA TTTTTCAATTAACGA EcSMS35_0990 1003964 - 1005910 + | hypothetical protein EcSMS35_0991 1007275 - 1005923 - | hypothetical protein TERM 1364 1006434 - 1006447 + g 73 -3.8 -4.81249 | CACCACGGCAGAATC GGCA GGGCGA TGCC TTTTTCGGTTTCGCC TERM 1365 1007171 - 1007189 + g 72 -5.2 -4.4874 | opp_overlap 1007172, overlap 1007172 CGCGCAAAGCATTGA AGGCAGCA GCG TGCTGTCG TTTTCCATTTTTAGC alkA 1007409 - 1008257 + | DNA-3-methyladenine glycosylase 2 EcSMS35_0993 1011684 - 1008367 - | sensory box-containing diguanylate cyclase TERM 1366 1010529 - 1010550 + g 71 -2.9 -4.75174 | overlap 1010528 ACGCCCAGACAACAT CGCCATTGC GGTT GTAGTAGCG TTTTTCCATTGAATA TERM 1367 1011128 - 1011114 - G 95 -10 -4.67353 | GCAGCGACTCAAAAA GCAACC GTG GGTTGC GATGGCGCAGCAGAT TERM 1368 1011245 - 1011220 - G 75 -4.6 -4.81551 | overlap 1011221 TACCCATATCAAAAA TGCCCTGAGA GGATCG TCTCCGGGCG TCAGCAGGATAACCA udk 1012002 - 1012643 + | uridine kinase dcd 1012735 - 1013316 + | deoxycytidine triphosphate deaminase TERM 1369 1014204 - 1014175 - g 70 -7.1 -4.128 | ACGTTGACAGAGAAA CCGGAATGGCAGC TGAG ACTGCAATTCCCG CAACTGAATCTTGAC TERM 1370 1014559 - 1014540 - g 74 -8.6 -3.8709 | overlap 1014529 1014541 AAATCCGCGGATAAA CTTCCAGC CACG GCTGGAAA ACGTTGAGATTGGCA asmA 1013338 - 1015191 + | AsmA protein TERM 1371 1015201 - 1015233 + T 100 -12.8 -3.87815 | opp_overlap 1015201, overlap 1015203 ATGTAAGACAAGTTA TGCAGATGGCGGCG TCAAT TGTCGCCATCTGTA TTTATAGCACTAAGC TERM 1372 1015203 - 1015231 + T 100 -13.2 -3.52906 | opp_overlap 1015201, overlap 1015201 GTAAGACAAGTTATG CAGATGGCGGCG TCAAT TGTCGCCATCTG TATTTATAGCACTAA EcSMS35_0997 1015533 - 1015243 - | putative DNA-binding protein EcSMS35_0998 1015744 - 1015523 - | hypothetical protein EcSMS35_0999 1017665 - 1016082 - | TerC family/CBS/transporter associated domain-containing protein TERM 1373 1016249 - 1016261 + g 70 -4.1 -4.72272 | overlap 1016250 ACAGCCCGGCAATGG TGTGA TAT TCACG TTTTTCATCCAGCGG TERM 1374 1016891 - 1016935 + g 75 -11.3 -2.90075 | opp_overlap 1016900, overlap 1016927 CATCTTCTTTTTGCC CGCTAAGCAGGCGCATTACCG CTT CGGTAGTCCGCTGGCGCAGCG TCTGGTTAGCGGAAA TERM 1375 1017838 - 1017820 - H 75 -4.6 -4.89477 | GTGGTAATAATAAAA CGTTATTT AAG AAATATCG CATGTGGAGACGCTA EcSMS35_1000 1018324 - 1019463 + | polysaccharide biosynthesis/export protein TERM 1376 1019751 - 1019720 - g 70 -5.8 -4.21194 | TTTGACCATGGAAAA GCGCCATATCGAAC GCTT ATGCGAGATGGCAC CTGAGATGCGCGGCA wzb 1019469 - 1019912 + | low molecular weight protein-tyrosine-phosphatase wzb wzc 1019915 - 1022077 + | tyrosine-protein kinase wzc wcaA 1022169 - 1023008 + | colanic acid biosynthesis glycosyl transferase WcaA EcSMS35_1004 1023011 - 1023499 + | putative colanic acid biosynthesis acetyltransferase wcaB TERM 1377 1023684 - 1023702 + GF 70 -6.7 -4.0648 | opp_overlap 1023671 TACGCCGCGGATGAC CGCGATG GCGAA CATTGCG TTGTTTCGTCTGCTT TERM 1378 1023871 - 1023861 - gf 74 -3.2 -4.92239 | CGAAAAAGTGAAAAA CCAT AAA ACGG ATGTCACTCTGGTCT wcaC 1023496 - 1024713 + | colanic acid biosynthesis glycosyl transferase WcaC TERM 1379 1024773 - 1024758 - gf 70 -6.1 -4.19238 | TGGTTAACGTCAAAA TCGCC CAGCTT GGCGA AAGTTTCCCCATTAC wcaD 1024688 - 1025905 + | colanic acid polymerase WcaD wcaE 1025916 - 1026662 + | colanic acid biosynthesis glycosyl transferase WcaE EcSMS35_1008 1026678 - 1027226 + | putative colanic acid biosynthesis acetyltransferase wcaF gmd 1027253 - 1028374 + | GDP-mannose 4,6-dehydratase fcl 1028377 - 1029342 + | GDP-L-fucose synthetase TERM 1380 1029624 - 1029634 + G 70 -6.8 -4.11692 | TATGACGATAACTTC TCCG GCA CGGA TTTTACCACTCACTA nudD 1029345 - 1029824 + | GDP-mannose mannosyl hydrolase TERM 1381 1030150 - 1030168 + G 70 -6.6 -4.07568 | GCCGGATCGCATTAT CGGCGTGG TAC CAACGCTG TTTTGCACGCCGGGA TERM 1382 1030677 - 1030653 - g 76 -3.5 -5.00616 | overlap 1030655 CGCGGCTTGAAAAAA TGGCGCAGC AGCGTGG ACTGCGCAA CATGCAATTTTTCCC wcaI 1029821 - 1031044 + | colanic acid biosynthesis glycosyl transferase WcaI TERM 1383 1032133 - 1032115 - g 72 -7.4 -3.86202 | GTCGAGCAGATCAAA GCTGATGG TCG CCATGAGC ATCGGGTGCATCGCG cpsB 1031047 - 1032483 + | mannose-1-phosphate guanylyltransferase TERM 1384 1032559 - 1032537 - f 81 -3.4 -5.3658 | overlap 1032538 ACGACAAAAACAAAA TTGGCCGT TTCGGTC AGGGCCAA CTATTGCCTGAAAAA cpsG 1032585 - 1033955 + | phosphomannomutase EcSMS35_1015 1034010 - 1035404 + | capsular polysaccharide biosynthesis protein wzxC 1035406 - 1036884 + | polysaccharide biosynthesis protein WzxC TERM 1385 1037693 - 1037662 - g 75 -4.4 -4.73682 | gap 1 CCGCACAACAGAAAA CGGTGGCAATTACCC TGC GCG-AACTGGCACCG TTCGACAAACGTCTC wcaK 1036956 - 1038236 + | colanic acid biosynthesis protein WcaK TERM 1386 1038235 - 1038247 + G 71 -3.4 -4.75404 | opp_overlap 1038235 TCGGGGAGGTGAAAT GAAG GTCGG CTTC TTTTTACTGAAATTT wcaL 1038233 - 1039453 + | colanic acid biosynthesis glycosyl transferase WcaL TERM 1387 1039502 - 1039520 + G 70 -10.3 -3.18383 | ACGCACCTTCCTGAC GGCAAGC TCCGC GCTTGCC TTCCTCCATACCCCT wcaM 1039464 - 1040858 + | colanic acid biosynthesis protein WcaM gne 1041016 - 1042011 + | UDP-N-acetylglucosamine 4-epimerase TERM 1388 1042857 - 1042847 - g 70 -4.6 -4.57474 | TGAATTCATAGAAAA GCCG GAT CAGC CGCAGACGCTGGACT galF 1042254 - 1043147 + | regulatory protein GalF TERM 1389 1043187 - 1043242 + F 80 -7.1 -4.52857 | gap 1, opp_overlap 1043202 TTGGCAAGGAAACTA TAACAGCAGTGAAGATTCGTGGCGAA AGTAA TTTGTTGCGAATATTC-CTGCCGTTA TTTTGTATAAACAAT EcSMS35_1022 1043457 - 1044278 + | glycosyl transferase, group 2 EcSMS35_1023 1044280 - 1046046 + | hypothetical protein TERM 1390 1046307 - 1046323 + G 82 -2.3 -5.32882 | AGGGCTGGACGAGTC CAAAAAT GAG ATTGTTG TTTTTTGTGATGATG EcSMS35_1024 1046050 - 1046922 + | glycosyl transferase, group 2 TERM 1391 1047143 - 1047130 - gf 79 -3.8 -5.15682 | AAAAGATAAAGAAAA GGCA TGCTTC TGCC ATAGTTCTAATTTAT EcSMS35_1025 1046922 - 1048100 + | hypothetical protein EcSMS35_1026 1048051 - 1049076 + | glycosyl transferase, group 1 TERM 1392 1050173 - 1050191 + G 70 -4.6 -4.5265 | ATTTCCGCTATATTT TCAGAGTT ATT AGTTCTGA TTTTATGCTATGGTT EcSMS35_1027 1049057 - 1050235 + | putative polysaccharide biosynthesis protein EcSMS35_1028 1050258 - 1050698 + | hypothetical protein EcSMS35_1029 1050720 - 1050932 + | IS1 transposase orfA EcSMS35_1030 1050943 - 1051446 + | IS1 transposase orfB gnd 1051833 - 1053239 + | 6-phosphogluconate dehydrogenase, decarboxylating TERM 1393 1053268 - 1053288 + F 100 -13.3 -5.77853 | opp_overlap 1053266 ACAATAAAATTGAGG CCCGGCGTA TAT TATGCCGGG TTTTTTTTACCAATT TERM 1394 1053835 - 1053851 + G 77 -8.7 -4.07687 | opp_overlap 1053835 1053836, overlap 1053836 GTTATGGTGATCAAA TCAACGG TTC CCGTTGG TTTTACCGCAGCGAT ugd 1053487 - 1054653 + | UDP-glucose 6-dehydrogenase TERM 1395 1054664 - 1054684 + F 78 -8.3 -4.09554 | opp_overlap 1054656, overlap 1054656 ACTAACATCCTGTTA TCAGGGC TATTTAC GCCCTGA TTGTCTTTTGTTACT EcSMS35_1033 1054799 - 1055779 + | chain length determinant protein TERM 1396 1055801 - 1055826 + T 100 -11.1 -5.41143 | opp_overlap 1055802, overlap 1055802 CGGTTTTAAAGAAAA AGGGCAGGGTG GTGA CACCTTGCCCG TTTTTTTGCCGGATG TERM 1397 1055802 - 1055825 + T 100 -14.6 -3.83963 | opp_overlap 1055802, overlap 1055801 GGTTTTAAAGAAAAA GGGCAGGGTG GTGA CACCTTGCCC GTTTTTTTGCCGGAT TERM 1398 1055825 - 1055802 - T 100 -12.4 -5.27335 | opp_overlap 1055801 1055802 GGTTTTAAAGAAAAA GGGCAGGGTG GTGA CACCTTGCCC GTTTTTTTGCCGGAT hisIE 1056486 - 1055875 - | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase hisF 1057256 - 1056480 - | imidazoleglycerol phosphate synthase, cyclase subunit hisA 1057975 - 1057238 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase hisH 1058565 - 1057975 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit hisB 1059632 - 1058565 - | histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisC 1060702 - 1059632 - | histidinol-phosphate aminotransferase TERM 1399 1059843 - 1059829 - G 70 -7.1 -4.13767 | opp_overlap 1059832 1059833 1059834 TTTCGGAGTCGAAAA CCTGC TCCAC GCAGG GGATCTCTTTCAGTG hisD 1062003 - 1060699 - | histidinol dehydrogenase hisG 1062908 - 1062009 - | ATP phosphoribosyltransferase TERM 1400 1062963 - 1062989 + H 100 -20.2 -3.99405 | opp_overlap 1062963 CCGCGCAATAAAAAA GCCCCCGGAAGG TGA TCTTCCGGGGGC TTTCTCATGCGTTCA TERM 1401 1062989 - 1062963 - H 100 -19.5 -5.4505 | opp_overlap 1062963 CCGCGCAATAAAAAA GCCCCCGGAAG GTGAT CTTCCGGGGGC TTTCTCATGCGTTCA EcSMS35_1042 1063273 - 1063401 + | hypothetical protein EcSMS35_1043 1063531 - 1064355 + | NAD dependent epimerase/dehydratase family protein EcSMS35_1044 1064401 - 1065330 + | LysR family transcriptional regulator TERM 1402 1065416 - 1065442 + F 91 -7.3 -5.26875 | opp_overlap 1065419, overlap 1065419 TCAAAAAATGACTAA AAACCGACGTT TCATC AGCGTCGGTTA TTTTTTGCTTCAAAC TERM 1403 1065439 - 1065419 - f 80 -6.8 -4.88129 | opp_overlap 1065416 1065419 AAAAATGACTAAAAA CCGACGTT TCATC AGCGTCGG TTATTTTTTGCTTCA TERM 1404 1065419 - 1065439 + F 90 -9 -4.72473 | opp_overlap 1065419, overlap 1065416 AAAAATGACTAAAAA CCGACGTT TCATC AGCGTCGG TTATTTTTTGCTTCA yeeF 1065597 - 1066955 + | amino acid permease TERM 1405 1066976 - 1067003 + F 100 -12.8 -6.04419 | opp_overlap 1066976 1066972 TTTTCTAATAATCAA CCGGAGTCGAAT GAAT ATTTGGCTCCGG TTTTTTTATTCTTTT TERM 1406 1067003 - 1066976 - f 71 -8.4 -3.53444 | opp_overlap 1066976, overlap 1066972 TTTTCTAATAATCAA CCGGAGTCGAAT GAAT ATTTGGCTCCGG TTTTTTTATTCTTTT EcSMS35_1046 1066986 - 1067099 + | hypothetical protein EcSMS35_1047 1067134 - 1068192 + | YeeE/YedE family membrane protein EcSMS35_1048 1068206 - 1068433 + | hypothetical protein sbcB 1069903 - 1068476 - | exodeoxyribonuclease I EcSMS35_1050 1070185 - 1070027 - | hypothetical protein TERM 1407 1070177 - 1070188 + Gg 72 -4.4 -4.62069 | overlap 1070167 GTCTGGTTTTGCGGC GGAA AACA TTCC TTTTTCACCTCAGCC TERM 1408 1070988 - 1070954 - gH 100 -10.8 -4.63218 | overlap 1070955 TTGGGGTCAACAAAA CTTTACTACGGTGCAA ATT TTGCACCGTGGGAAAA AGGTTGGTACGGAAC TERM 1409 1070987 - 1070955 - gH 85 -12.1 -3.3761 | overlap 1070954 TGGGGTCAACAAAAC TTTACTACGGTGCAA ATT TTGCACCGTGGGAAA AAGGTTGGTACGGAA dacD 1070106 - 1071278 + | serine-type D-Ala-D-Ala carboxypeptidase gyrI 1071397 - 1071870 + | DNA gyrase inhibitory protein EcSMS35_1054 1072068 - 1073126 + | hypothetical protein EcSMS35_1053 1073207 - 1073091 - | hypothetical protein TERM 1410 1073319 - 1073336 + G 70 -5.6 -4.329 | ACTACCAAGCCTTCA TTCCAG GACGTA CTGGAA TTTGTTCGTCTGTTC EcSMS35_1055 1073298 - 1073627 + | hypothetical protein TERM 1411 1073637 - 1073673 + T 83 -10.9 -3.60998 | opp_overlap 1073644, overlap 1073635 1073640 1073644 AAGTAATTCCTGTTT TATTCAATGAGGGTTGC CCG GCAACCCTCATTGCTCA TTGATTCTTATCTGT TERM 1412 1073640 - 1073670 + T 100 -17 -2.91042 | opp_overlap 1073644, overlap 1073637 1073635 1073644 TAATTCCTGTTTTAT TCAATGAGGGTTGC CCG GCAACCCTCATTGC TCATTGATTCTTATC TERM 1413 1073644 - 1073666 + T 100 -16.4 -3.30956 | opp_overlap 1073644, overlap 1073640 1073637 1073635 TCCTGTTTTATTCAA TGAGGGTTGC CCG GCAACCCTCA TTGCTCATTGATTCT TERM 1414 1073666 - 1073644 - T 100 -16.4 -3.05384 | opp_overlap 1073644 1073640 1073637 1073635 TCCTGTTTTATTCAA TGAGGGTTGC CCG GCAACCCTCA TTGCTCATTGATTCT EcSMS35_1056 1074084 - 1073728 - | hypothetical protein TERM 1415 1073911 - 1073924 + g 70 -3.7 -4.72333 | opp_overlap 1073898, overlap 1073912 GACCGGGTGATTCAT GGCCC GGTA GGGCG TTTTTACCTCTAATT TERM 1416 1074188 - 1074202 + r 77 -3.6 -5.26316 | TTCCTACCCAGACCG TGGATT TGG AATTCA TTTTTTGTCAGGTCA TERM 1417 1074368 - 1074346 - R 91 -9.9 -4.61873 | gap 1, opp_overlap 1074365 GTTTATAAATGAAAA CGCCAG-CTG TATT CAGGCTGGCG TCAGGGGAAATGAAG EcSMS35_1057 1074512 - 1074399 - | hypothetical protein EcSMS35_1058 1074716 - 1074525 - | hypothetical protein EcSMS35_1059 1075089 - 1074826 - | hypothetical protein TERM 1418 1075153 - 1075132 - R 70 -10.1 -2.55811 | overlap 1075131 1075130 TAAAAATGGAAAAGT GGCGTGGTG AAAA CACCAGGCC GTAGCAGAAGGCTAT EcSMS35_1060 1075444 - 1075178 - | hypothetical protein TERM 1419 1075293 - 1075330 + g 74 -8.5 -4.00042 | gap 1 ACGGTATGCTGATGG CGGGGATTCA-GTTCACC GCT GGTGAGCATGAGTTCCAG TTGTTTCATCAGCAG TERM 1420 1075443 - 1075422 - G 70 -10.1 -3.17075 | CGGTCGGCAAGGTAA TGCAGGCGG TTAC CCTCCTGCA CCAGACGTGCCCCGA EcSMS35_1061 1075841 - 1075620 - | hypothetical protein EcSMS35_1062 1076380 - 1075904 - | RadC family DNA repair protein EcSMS35_1063 1076875 - 1076396 - | antirestriction protein EcSMS35_1064 1077778 - 1076957 - | hypothetical protein TERM 1421 1077855 - 1077830 - H 100 -16.9 -5.46129 | CAATAAATGAAAAAA GCCGCGTCTCC CGGA GAAGACGCGGC CTGACGGGTGAAATG EcSMS35_1066 1077868 - 1078002 + | hypothetical protein EcSMS35_1065 1078409 - 1077999 - | hypothetical protein EcSMS35_1067 1079108 - 1078425 - | hypothetical protein TERM 1422 1079224 - 1079208 - R 91 -10.1 -4.85129 | opp_overlap 1079208 1079210, overlap 1079211 1079213 ACCAGACAGGAAAAA CACCACC ACA GGCGGTG GCGTTTCTTTGGGGC EcSMS35_1068 1080314 - 1079244 - | patatin family phospholipase EcSMS35_1069 1081216 - 1080311 - | hypothetical protein EcSMS35_1070 1083609 - 1081213 - | hypothetical protein TERM 1423 1083688 - 1083670 - R 93 -11.8 -3.97947 | opp_overlap 1083669 1083678 1083683, overlap 1083683 GTCATTTACTACAAA CGATCGTT TAT AACGATCG ATATGATAGTAACGA EcSMS35_1071 1084699 - 1083827 - | putative GTPase TERM 1424 1084754 - 1084729 - R 100 -12.6 -5.06052 | gap 1 TGAAAAAAGACAAAA CCCCGCGCACC GGAAA GGTG-GCGGGG GATTCACGGAAATAA EcSMS35_1072 1085934 - 1084783 - | hypothetical protein TERM 1425 1084837 - 1084860 + g 86 -3.9 -5.40072 | CAAATCATGGTACGC CTGCTCAAT CATTTC ATTCAGCAG TTTTTTTGGGAGGAC TERM 1426 1086012 - 1085990 - H 81 -3.4 -5.43974 | overlap 1085991 1085992 AAAAGCAAACAAAAA CCTCCGTACA TGA TGTACAGAAC AATCTACCAGGTAGT TERM 1427 1088034 - 1088018 - g 76 -3.7 -4.92363 | AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGTGTTAGTGC EcSMS35_1073 1087862 - 1088383 + | IS150 transposase orfA TERM 1428 1089212 - 1089182 - g 100 -11.3 -4.98531 | opp_overlap 1089181 GCCTGAAATTAAAAA GTCTGACTCCAAT TGAAT ATCGGAATCAGAC CTATATGCCTCGTGT EcSMS35_1074 1088380 - 1089231 + | IS150 transposase orfB TERM 1429 1089429 - 1089450 + T 72 -10.1 -2.92371 | GCCTGAAAGCTGACT GCCTCCTGC TGAG GTGGGAGGC TATGATTCAGTGCGT TERM 1430 1089690 - 1089716 + T 77 -10.1 -3.46304 | overlap 1089692 GATCTGTGGACGAGT GAGCGGCGTGC CTGAT GTACGCCGCTA TTACTGTATTTTACC TERM 1431 1089692 - 1089714 + T 90 -12.7 -3.29269 | overlap 1089690 TCTGTGGACGAGTGA GCGGCGTGC CTGAT GTACGCCGC TATTACTGTATTTTA TERM 1432 1089730 - 1089763 + T 100 -16.1 -3.30124 | opp_overlap 1089735 TATTACTGTATTTTA CCACAGGGCTGGT TTTCTGCT GCCAGCCCTGTGG TTCTCAGACATCAAC EcSMS35_1075 1090376 - 1089774 - | hypothetical protein EcSMS35_1076 1090676 - 1090470 - | prophage CP4-57 regulatory protein AlpA TERM 1433 1092030 - 1092040 + H 71 -2.4 -5.15969 | CTCCTCACAGCCTTA CCCG TAA CCGG TTTTTTACATTAAAA TERM 1434 1092179 - 1092199 + H 71 -10.5 -2.74263 | overlap 1092178 TTTACGACGTGGCTA TTCCGTATG AAC CATACGGAG ATTTAACCATGACCT TERM 1435 1092751 - 1092733 - g 74 -8.8 -3.94936 | AAGGAACATACCAAA GCTCACTG CAC CGGTGAGC GCAATTTTGGCTGTA EcSMS35_1077 1092208 - 1092777 + | hypothetical protein EcSMS35_1078 1093426 - 1093833 + | hypothetical protein TERM 1436 1094327 - 1094302 - f 80 -11.9 -2.87132 | opp_overlap 1094300 1094296 TCGGCGCCGGATACA GCATCTACCCT GCTC AGGGCAGACGC TATGGCTTGTATTTT EcSMS35_1079 1094513 - 1095496 + | ISL3 family transposase TERM 1437 1096109 - 1096145 + T 85 -9.3 -4.40358 | opp_overlap 1096095 1096109 1096113, overlap 1096110 1096112 1096113 ACGGCGGGGTATTAA TTGACATCCCCCGGCGC AAT GTGCCGGGGGATAATGG TTTTATGCGGTCAAT TERM 1438 1096110 - 1096144 + T 78 -10.6 -3.23733 | opp_overlap 1096095 1096109 1096113, overlap 1096109 1096112 1096113 CGGCGGGGTATTAAT TGACATCCCCCGGCGC AAT GTGCCGGGGGATAATG GTTTTATGCGGTCAA TERM 1439 1096112 - 1096142 + T 91 -13.2 -3.18044 | opp_overlap 1096095 1096109 1096113, overlap 1096110 1096109 1096113 GCGGGGTATTAATTG ACATCCCCCGGCGC AAT GTGCCGGGGGATAA TGGTTTTATGCGGTC TERM 1440 1096141 - 1096113 - T 100 -16.7 -2.56596 | opp_overlap 1096112 1096110 1096109 1096113, overlap 1096095 1096109 CGGGGTATTAATTGA CATCCCCCGGCGC AAT GTGCCGGGGGATA ATGGTTTTATGCGGT TERM 1441 1096113 - 1096141 + T 100 -16.7 -2.50345 | opp_overlap 1096095 1096113 1096109, overlap 1096112 1096110 1096109 CGGGGTATTAATTGA CATCCCCCGGCGC AAT GTGCCGGGGGATA ATGGTTTTATGCGGT EcSMS35_1081 1097182 - 1096148 - | phosphotriesterase family protein EcSMS35_1082 1098150 - 1097185 - | hypothetical protein TERM 1442 1097570 - 1097583 + g 75 -6.7 -4.35524 | ACCAGCATGGATCCC GTAGC TTCA GCTAC TTTTGCATTTCCAGC TERM 1443 1097899 - 1097913 + g 72 -5.7 -4.49644 | opp_overlap 1097899 GAGACCGGCAAACCA GTTCC AGAGA GGAAC TTTTCGGTTTTTAAT TERM 1444 1098176 - 1098197 + r 72 -7.3 -4.14147 | opp_overlap 1098176 TTCTATTATAGTAAA TGGAGTAAC TGGT GTTACCCCA TTATTATTATTATCT TERM 1445 1098197 - 1098176 - R 81 -9.5 -3.86202 | opp_overlap 1098176 TTCTATTATAGTAAA TGGAGTAAC TGGT GTTACCCCA TTATTATTATTATCT EcSMS35_1083 1098965 - 1098207 - | hypothetical protein EcSMS35_1084 1100193 - 1098979 - | PfkB family DNA-binding protein/kinase TERM 1446 1101219 - 1101200 - H 74 -5.7 -4.65838 | CAGAGATTGGAAAAA CCGTCCT GAAAAA AAGACGG TAGACGGGCTGTATT TERM 1447 1101568 - 1101551 - H 72 -5.5 -4.52857 | opp_overlap 1101550 1101551, overlap 1101553 1101563 ATTCTCGATACAAAA CTCTGCT GAAT AGCAGCG ATTTTCCCAGCGTGG EcSMS35_1086 1101945 - 1102355 + | IS2 transposase orfA EcSMS35_1087 1104309 - 1103143 - | lyase EcSMS35_1088 1102313 - 1103218 + | IS2 transposase orfB TERM 1448 1104443 - 1104421 - TR 71 -9.2 -3.27766 | opp_overlap 1104435, overlap 1104422 AACATGTGATATCAA TCTGTCAGAA TTC TTCTGACAGT CAGTAACTGAATGCA TERM 1449 1104442 - 1104422 - TR 81 -12.7 -2.56177 | opp_overlap 1104435, overlap 1104421 ACATGTGATATCAAT CTGTCAGAA TTC TTCTGACAG TCAGTAACTGAATGC EcSMS35_1089 1105830 - 1104532 - | anaerobic C4-dicarboxylate transporter TERM 1450 1104846 - 1104828 - G 76 -3.8 -4.97383 | overlap 1104832 AGGTAAAAAAAAGAA CTAATGCT AAA AGCATCGG ATAAGTTTGTAAAAT TERM 1451 1105139 - 1105125 - G 83 -10 -4.1157 | CAGCAAGAATAACAA TGGCGA TCG TCGCCA GCATGAATAATCCGA EcSMS35_1090 1106608 - 1105889 - | aspartate racemase EcSMS35_1091 1106948 - 1107847 + | LysR family transcriptional regulator EcSMS35_1092 1108117 - 1108251 + | hypothetical protein TERM 1452 1108382 - 1108404 + T 100 -10.6 -5.24129 | opp_overlap 1108380 CAAACTCATCGAATT GCACCTCC TGTTTGT GGAGGTGC TTTTTTGTGCACAGC TERM 1453 1109082 - 1109114 + T 91 -11.3 -4.15044 | opp_overlap 1109089, overlap 1109086 1109088 1109089 CCTTATAGGCGCATT TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTCTTCCCACCAGG TERM 1454 1109086 - 1109110 + T 91 -9.9 -4.67607 | opp_overlap 1109089, overlap 1109082 1109088 1109089 ATAGGCGCATTTGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCTTCCCAC TERM 1455 1109088 - 1109108 + T 100 -12.5 -3.94772 | opp_overlap 1109089, overlap 1109086 1109082 1109089 AGGCGCATTTGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCTTCCC TERM 1456 1109089 - 1109107 + T 100 -16 -2.95779 | opp_overlap 1109089, overlap 1109088 1109086 1109082 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTTCC TERM 1457 1109107 - 1109089 - T 100 -16 -4.62069 | opp_overlap 1109089 1109088 1109086 1109082 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTTCC EcSMS35_1094 1110493 - 1109201 - | d-galactonate transporter TERM 1458 1109733 - 1109723 - G 100 -3.2 -5.78622 | CCAGGTCAAAAAAAA CCAC AGT GTAG AAGTCACCGCAAATT EcSMS35_1095 1111761 - 1110613 - | mandelate racemase/muconate lactonizing enzyme family protein EcSMS35_1096 1112375 - 1111758 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase-like protein dgoK_2 1113237 - 1112359 - | 2-dehydro-3-deoxygalactonokinase dgoR_2 1113923 - 1113234 - | galactonate operon transcriptional repressor EcSMS35_1099 1114722 - 1114892 + | hypothetical protein EcSMS35_1100 1115155 - 1115466 + | IS911 transposase orfA TERM 1459 1115475 - 1115493 + F 71 -8.9 -3.33087 | opp_overlap 1115466 ACGATAGTTGCCAGA CTGAGTG ACAGC CACTCAG TTGTCAGCCTCTGTT TERM 1460 1115773 - 1115759 - g 71 -2.1 -4.93898 | ACATCAGTACAAAAA TGCTC GTCAG GAACA TACCTGCCTGCCGAA EcSMS35_1101 1115586 - 1116332 + | IS911 transposase orfB EcSMS35_1102 1116552 - 1116686 + | hypothetical protein TERM 1461 1116829 - 1116871 + F 74 -9.9 -3.35046 | opp_overlap 1116843 1116847, overlap 1116828 1116830 GGTATCCCACTCATG CTGGTTGTACACCAGACAC GCAGA GTCTCCGGTGTACAGCCAA TCTTTGGGACGATGG TERM 1462 1116830 - 1116870 + F 84 -13.4 -2.60813 | opp_overlap 1116843 1116847, overlap 1116829 1116828 GTATCCCACTCATGC TGGTTGTACACCAGACAC GCAGA GTCTCCGGTGTACAGCCA ATCTTTGGGACGATG TERM 1463 1117229 - 1117243 + F 76 -5.8 -4.79352 | opp_overlap 1117228 TCTTCCGGAAGATAT GAAAAT AAT ATTTTC TTTTGTTCTGCGTCG TERM 1464 1117342 - 1117359 + F 100 -6.9 -5.86965 | ATAGTTTACCTTCCG TCCCCTG CATC CTGGGGA TTTTTTTTACTCAGT TERM 1465 1117523 - 1117491 - f 93 -11.3 -4.25283 | opp_overlap 1117498, overlap 1117495 1117497 1117498 ACTGTGGTAGCAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA AATGCGCCTATAAGG TERM 1466 1117519 - 1117495 - f 91 -9.9 -4.72007 | opp_overlap 1117498, overlap 1117491 1117497 1117498 TGGTAGCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAAATGCGCCTAT TERM 1467 1117517 - 1117497 - f 100 -12.5 -3.97149 | opp_overlap 1117498, overlap 1117495 1117491 1117498 GTAGCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAAATGCGCCT TERM 1468 1117516 - 1117498 - f 100 -16 -2.97205 | opp_overlap 1117498, overlap 1117497 1117495 1117491 TAGCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC TERM 1469 1117498 - 1117516 + F 100 -16 -4.62069 | opp_overlap 1117498 1117497 1117495 1117491 TAGCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC TERM 1470 1117699 - 1117676 - f 100 -11 -5.26907 | opp_overlap 1117675 1117689, overlap 1117690 TAAGACAAAAGAAAA CACCCTGCTC AAAT GAGCAAGGCG CTCGTGTATTGCTGA TERM 1471 1117826 - 1117839 + F 73 -5.3 -4.65722 | CCATTGAATGGTTTA TCTAC GCGA GTAGA TTTATTTATATGTAA TERM 1472 1118091 - 1118123 + G 74 -3.3 -5.00616 | overlap 1118084 1118095 GATTTTGCCCTGTAC GGCCTTGCCGCAGGT ATT ATCTTTGGCGATGTC TTTTTTCCGGAGGCG TERM 1473 1118552 - 1118566 + G 71 -2.8 -4.87133 | TGACTTATTAAGCTG GGGATG GCG TATTCC TTTTCTTTGCAGCAT EcSMS35_1103 1117938 - 1119332 + | major facilitator family transporter TERM 1474 1119357 - 1119369 + F 73 -4.9 -4.68593 | overlap 1119340 ACGTGAGATGCGCGT TCTTT ACC AAAGA TTTTTGGGTCATAAC EcSMS35_1104 1119437 - 1120468 + | periplasmic sugar binding transcriptional regulator EcSMS35_1105 1120428 - 1121462 + | inosine-uridine preferring nucleoside hydrolase TERM 1475 1122065 - 1122043 - g 84 -10.6 -3.73224 | overlap 1122045 1122058 TTACTCTTGACGAAA GATCAGGGCT ACA AGCCCTGATA GAGTGTATTAATCAA TERM 1476 1122063 - 1122045 - g 90 -13.2 -3.45027 | overlap 1122043 1122058 ACTCTTGACGAAAGA TCAGGGCT ACA AGCCCTGA TAGAGTGTATTAATC EcSMS35_1106 1121526 - 1122239 + | mgtC family protein TERM 1477 1122850 - 1122863 + F 74 -3.7 -4.95155 | opp_overlap 1122838, overlap 1122849 1122848 ATACGTCGCGCATCG GCGGC ACTC GCCAC TTTTTCTGATGTCAG TERM 1478 1122910 - 1122960 + F 77 -3.1 -5.24531 | gap 1, overlap 1122954 CCGTCCTCTGCCTGC TCCCGGCAACAGACATACGTGAGC GGAA GCGCCTGGCCG-CTGTTGTCGGGA TTTTTTATGCCGACT TERM 1479 1123004 - 1123022 + F 100 -13.1 -4.67011 | TGAACATCCGGGCCT GGCGGGC TGCGC GCCCGCC TTTTTACATCACATT TERM 1480 1123704 - 1123689 - f 71 -10.4 -2.7094 | overlap 1123688 GGCCAGTGACACAAG GCGTCG TGTA CGACGC GGATCACCGAGACTG TERM 1481 1124684 - 1124711 + F 73 -4.9 -4.63218 | overlap 1124689 AGATGGTGAGTCAGT TCAGCGTTGAG AGCAGC CTCAACTTTGA TTTTCTTGAGCAGGC TERM 1482 1124689 - 1124706 + F 70 -5.6 -4.3295 | overlap 1124684 GTGAGTCAGTTCAGC GTTGAG AGCAGC CTCAAC TTTGATTTTCTTGAG TERM 1483 1124833 - 1124812 - f 93 -11.7 -3.85698 | opp_overlap 1124816 TTTGTCGGCCATAAA TTCACCTTC ATTT GAAGGTGAA TTGAACATATCAAAA EcSMS35_1110 1125254 - 1125532 + | hypothetical protein TERM 1484 1125551 - 1125568 + T 78 -6.2 -4.68593 | TTTTCTGATTTTTCA GGGGCT ATTGCA GGCCCC TTTTTACATCATAAA TERM 1485 1125837 - 1125817 - T 80 -7.5 -4.50627 | TATTTATTAAATAAA GGCCCGCTT TTA AAATGGGCC TTAAGGGCAAGACGA EcSMS35_1111 1126901 - 1125870 - | asparaginase family protein TERM 1486 1127322 - 1127339 + H 82 -10.5 -3.8917 | AACTTCCGCTCCCAC GGGCGCG CCAC CGCGCTC TTCTTCTCATTCACC TERM 1487 1128325 - 1128287 - g 100 -14.4 -3.67112 | overlap 1128289 ACCACAGTTGAAGAA CAGCGCCAGTCACGGCGC TAC GCGCCATGCCCGGCGCAC ATATGCAGCGAGCGC TERM 1488 1128323 - 1128289 - g 100 -21.4 -3.41325 | overlap 1128287 CACAGTTGAAGAACA GCGCCAGTCACGGCGC TAC GCGCCATGCCCGGCGC ACATATGCAGCGAGC EcSMS35_1113 1128279 - 1128464 + | hypothetical protein EcSMS35_1114 1129878 - 1128517 - | anaerobic C4-dicarboxylate transporter TERM 1489 1128763 - 1128752 - G 77 -5.8 -4.66318 | overlap 1128756 ATCAGTTCAACAAAA GCCA GAAA TGGC GCATTGCCCGATCCC TERM 1490 1128827 - 1128816 - G 75 -4.4 -4.84274 | TAACCAGAGCAAAAA CGAT GCCC ATCG CAAAAGGGGGTAACC TERM 1491 1129118 - 1129092 - G 75 -4.5 -4.82901 | gap 2, overlap 1129094 TTCCGGTGACAAAAA TCTCCGATGAGCC AAC GGC-CATCAG-GA TCGGTAGCATAGGTA TERM 1492 1129148 - 1129164 + g 70 -5.7 -4.40572 | opp_overlap 1129148 AGCAGAGCATAATAA GCCGGCG TAC TGCCTGC TTTTATGACCGTTGT EcSMS35_1115 1131131 - 1129875 - | peptidase T EcSMS35_1116 1131997 - 1133397 + | putative aspartate ammonia-lyase TERM 1493 1133779 - 1133798 + G 70 -10.8 -2.83073 | overlap 1133778 GAGGACTGGACTATC TCGTTCAG GTCG CTGAACGA ATTCTTCGTAAAAAT EcSMS35_1117 1133553 - 1134887 + | anaerobic C4-dicarboxylate transporter TERM 1494 1135146 - 1135159 + F 86 -2.3 -5.64274 | opp_overlap 1135137 GATGAATGATGTTAT CACGG AATG CGGTG TTTTTTTATCGATAG TERM 1495 1135405 - 1135394 - g 75 -7.2 -4.31397 | opp_overlap 1135391, overlap 1135391 ATTTCTATAAAAGAA CGGC ACTT GCCG CACTGGTTATGGGTT TERM 1496 1136072 - 1136086 + G 83 -10 -4.09117 | opp_overlap 1136072 1136071 1136080 CTAAGCTGAATGAAC TGCCGA AAG TCGGCA TTGTTTATAACTACG ansB_2 1135375 - 1136421 + | L-asparaginase 2 TERM 1497 1136429 - 1136449 + T 100 -14.7 -4.55625 | opp_overlap 1136425 AGTACTAATAACCTC GCCCCGGTA ACG TGCCGGGGC TTTTATAGTATTGGT EcSMS35_1119 1137740 - 1137015 - | response regulator TERM 1498 1137128 - 1137114 - G 70 -5.7 -4.3623 | overlap 1137124 ACAGGAAAAATCAAA TGCCA ATATA TGGCA ACTTACCAGCCAGAT TERM 1499 1137353 - 1137369 + g 95 -6.6 -5.20783 | opp_overlap 1137347, overlap 1137347 GATTGAATATCTTCT GACTCT CAAGA AGAGTC TTTTTATGTTTCCAT EcSMS35_1120 1139375 - 1138719 - | GntR family transcriptional regulator EcSMS35_1121 1139530 - 1140846 + | anaerobic C4-dicarboxylate transporter EcSMS35_1122 1142278 - 1140962 - | anaerobic C4-dicarboxylate transporter TERM 1500 1142322 - 1142293 - R 72 -8.7 -3.66178 | gap 1, opp_overlap 1142296, overlap 1142297 TTTTTCAACCTCAAA GATATTCCCGGATA TAA TATCCGGGGA-ATC TTAAACATTATAATT TERM 1501 1142319 - 1142297 - R 78 -10.6 -3.27489 | opp_overlap 1142296, overlap 1142293 TCAACCTCAAAGATA TTCCCGGATA TAA TATCCGGGGA ATCTTAAACATTATA EcSMS35_1123 1143719 - 1142343 - | argininosuccinate lyase ArgH-like protein TERM 1502 1142960 - 1142948 - G 71 -3.4 -4.84311 | GGCTAGAGAATAAAA TCAG TTCCT CTGA AAGGCGAGTTAGATG EcSMS35_1124 1144378 - 1144767 + | hypothetical protein EcSMS35_1125 1145153 - 1146385 + | immunoglobulin-binding regulator A-like protein EcSMS35_1127 1147385 - 1147269 - | hypothetical protein TERM 1503 1147432 - 1147422 - H 72 -6.8 -4.26344 | ATAGCTGCATTAAAA CCTG CTG CAGG AATAGTTTCATGTGC TERM 1504 1150008 - 1150020 + H 82 -7.7 -4.48333 | GGTCAGACGTTGACC TGCAG AAA CTGCA TTTTAATTGGTCTAT EcSMS35_1129 1150574 - 1150738 + | hypothetical protein EcSMS35_1130 1150929 - 1151051 + | hypothetical protein cobU 1151203 - 1151748 + | cobinamide kinase/cobinamide phosphate guanyltransferase cobS 1151745 - 1152488 + | cobalamin 5'-phosphate synthase cobT 1152500 - 1153579 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase EcSMS35_1134 1153644 - 1154576 + | ErfK/YbiS/YcfS/YnhG family protein TERM 1505 1154626 - 1154597 - f 83 -12.3 -3.02946 | opp_overlap 1154603, overlap 1154603 TTGGTAATTAGAAAG CAAAAAGCCTGCT AGAA AGCAGGCTTTTTT GAATTTGGCTCCTCT TERM 1506 1154603 - 1154620 + F 100 -11.3 -5.22039 | opp_overlap 1154597 1154603 ATTAGAAAGCAAAAA GCCTGCT AGAA AGCAGGC TTTTTTGAATTTGGC TERM 1507 1154620 - 1154603 - f 100 -11.3 -5.05505 | opp_overlap 1154603, overlap 1154597 ATTAGAAAGCAAAAA GCCTGCT AGAA AGCAGGC TTTTTTGAATTTGGC nac 1155034 - 1155951 + | nitrogen assimilation regulatory protein Nac cbl 1156053 - 1157003 + | transcriptional regulator Cbl TERM 1508 1157028 - 1157010 - f 100 -11.7 -4.86133 | opp_overlap 1157010, overlap 1156999 CAGATATAGCAAAAA GCCCGCT ATAAA AGCGGGC TTTTCAGAAATTTGG TERM 1509 1157010 - 1157028 + F 93 -11.7 -4.12942 | opp_overlap 1156999 1157010 CAGATATAGCAAAAA GCCCGCT ATAAA AGCGGGC TTTTCAGAAATTTGG TERM 1510 1157535 - 1157545 + G 91 -3.2 -5.56568 | GACAGCTTCAATATG GTCA TTA TGGC TTTTTTTGCTGCTAT TERM 1511 1157871 - 1157851 - g 72 -6.2 -4.43681 | CAGGGAATACGAAAA TACCGCTA CTGAT TAACGGTA GCCTGAATATTCTTA EcSMS35_1139 1157310 - 1158764 + | MATE efflux family protein TERM 1512 1159002 - 1158988 - f 80 -4.4 -5.19916 | overlap 1158997 AAAACAGTTAAAAAA TAAAAA TTA TTTTTA CCCGGTTACCTTGTA TERM 1513 1159003 - 1159031 + F 100 -9.6 -5.4387 | opp_overlap 1158997 TAAAAATTATTTTTA CCCGGTTACCTT GTAAA AAAGTGACCGGG TTTTTTGATTTCTGT TERM 1514 1159276 - 1159291 + G 85 -3.2 -5.31877 | TTAATAAATATTATT TCTCTG GGAA CGGGGA TTTTTTATAATCAAT EcSMS35_1141 1159179 - 1159301 + | hypothetical protein TERM 1515 1159384 - 1159350 - T 87 -13.9 -2.85847 | opp_overlap 1159355 1159359 1159378, overlap 1159355 1159359 AAGGGTTATATGAGA TTAAAGAAATCTGCC GTAAA GACAGATTTCTTTAA AAGATAATTAGAGAT TERM 1516 1159379 - 1159355 - T 81 -9.4 -3.8766 | opp_overlap 1159355 1159359 1159378, overlap 1159350 1159359 TTATATGAGATTAAA GAAATCTGCC GTAAA GACAGATTTC TTTAAAAGATAATTA EcSMS35_1142 1160108 - 1159392 - | hypothetical protein TERM 1517 1160395 - 1160363 - R 85 -12.1 -3.34013 | opp_overlap 1160370 1160384, overlap 1160368 1160370 CATTTGCCCAAGGAA GCAAACAGCCCGC GTTTATT GCAGGCTATTTGC CAGATGTCTTACTTA amn 1161905 - 1160451 - | AMP nucleosidase TERM 1518 1160592 - 1160578 - G 73 -4.2 -4.82901 | GCGCCTTCATAAAAA CGGTTA GCC TGACCG GGAAGTTTAATCTCG TERM 1519 1161108 - 1161134 + g 77 -3 -5.08824 | opp_overlap 1161115, overlap 1161110 1161115 CTGACCATCGGCGGT AATTAAATGCCA TGC TGGCATCTGATG TTTTTTCCATGCAAG TERM 1520 1161127 - 1161115 - G 72 -7.7 -3.90112 | opp_overlap 1161110 1161108 1161115 TCGGCGGTAATTAAA TGCCA TGC TGGCA TCTGATGTTTTTTCC TERM 1521 1161385 - 1161367 - G 84 -7.4 -4.65895 | overlap 1161369 CGTGCGAGGGAAAAA TCGACGCG GCG CGCATCAA AATGCGATAGGGGGG TERM 1522 1162006 - 1161971 - R 75 -4.6 -4.90525 | opp_overlap 1162002, overlap 1161972 1161973 GAATGTGAAACAAAA GTGTAAGGCGAAGATC GGAT GATCTTCGCCAGACTA TCAAGCGCGTTGATT TERM 1523 1162004 - 1161973 - R 77 -11.6 -2.70854 | opp_overlap 1162002, overlap 1161972 1161971 ATGTGAAACAAAAGT GTAAGGCGAAGATC GGAT GATCTTCGCCAGAC TATCAAGCGCGTTGA shiA 1163323 - 1162007 - | shikimate transporter TERM 1524 1162147 - 1162134 - G 70 -3.8 -4.64676 | overlap 1162146 GCAGCGGCAATAAAA GGTG TAAATC CACC GCCAACCACACTGGC TERM 1525 1164348 - 1164338 - g 76 -4 -4.88228 | ATCTAATAGCAAAAA TTCA AAG TGAA ACAGATATACCAATA EcSMS35_1145 1163638 - 1164690 + | hypothetical protein TERM 1526 1164908 - 1164929 + T 100 -14.5 -3.58533 | opp_overlap 1164908 AGGGAATGTAAAAAA GAGTGCTCC GAAT GGAGCACTC TTTAAGAAATTATAA TERM 1527 1164929 - 1164908 - T 100 -14.5 -5.16572 | opp_overlap 1164908 AGGGAATGTAAAAAA GAGTGCTCC GAAT GGAGCACTC TTTAAGAAATTATAA EcSMS35_1146 1172028 - 1164952 - | putative invasin TERM 1528 1166006 - 1166018 + g 77 -6.9 -4.56775 | GTTAATGACGTTAAT GTGGC AGA GCCGC TTTTTAAGGCGAAGT TERM 1529 1168043 - 1168070 + g 77 -11.4 -3.20573 | gap 1, overlap 1168042 TCAACGGTATCCGGT CTCGCTCCT-GAT TCT ATCGAGGAGCGGG TATTGGTATAAGTGA TERM 1530 1172252 - 1172226 - R 100 -15.9 -4.34402 | overlap 1172203 GCGTTCATAGCAAAA CGCCCTCAACC ATAAA GGTCGAGGGCG CTTAAGATGTTAAAA EcSMS35_1148 1173315 - 1172518 - | hypothetical protein EcSMS35_1150 1174576 - 1173551 - | phage integrase family site specific recombinase EcSMS35_1151 1174779 - 1174576 - | hypothetical protein EcSMS35_1152 1177279 - 1174838 - | exonuclease family protein TERM 1531 1175026 - 1175043 + g 76 -12.7 -2.55351 | opp_overlap 1175019, overlap 1175025 TGTAGTAACGCCACG GGCAGGG GATC CCCTGCC GTTCGTATGAACGGC TERM 1532 1175446 - 1175460 + g 78 -5.6 -4.79352 | CCTTAATTGGGTGAT CTGCCG TCT CGCCAG TTTTATTATCGCTGG TERM 1533 1175630 - 1175662 + g 70 -4 -4.67904 | gap 1, opp_overlap 1175619, overlap 1175641 ACAATCAGGGCAGTT GCCGCCACCGCTCTG ACCG CAG-GCGGTGCAGAC TTTTTCCGGTTCCTG TERM 1534 1175933 - 1175944 + g 70 -4.4 -4.4959 | AATTTTGTTTACTTC GTCA GCGG TGAC TTTTACTTGGTTAGC EcSMS35_1153 1177564 - 1177373 - | hypothetical protein dicB 1177749 - 1177561 - | division inhibition protein DicB EcSMS35_1155 1177766 - 1177888 + | hypothetical protein EcSMS35_1156 1178535 - 1178317 - | hypothetical protein EcSMS35_1157 1178693 - 1178565 - | hypothetical protein EcSMS35_1158 1178850 - 1178695 - | hypothetical protein EcSMS35_1159 1179525 - 1179752 + | repressor protein EcSMS35_1160 1179736 - 1180287 + | hypothetical protein EcSMS35_1161 1180259 - 1181299 + | hypothetical protein EcSMS35_1162 1181331 - 1181753 + | hypothetical protein EcSMS35_1163 1181787 - 1182557 + | hypothetical protein EcSMS35_1164 1182573 - 1182965 + | hypothetical protein EcSMS35_1165 1182962 - 1183258 + | hypothetical protein EcSMS35_1166 1183255 - 1183716 + | hypothetical protein EcSMS35_1167 1183694 - 1184050 + | hypothetical protein TERM 1535 1184121 - 1184136 + F 79 -11.8 -2.75064 | opp_overlap 1184113, overlap 1184118 CAGAACATCAGGAGG CCGCCC GAAA GGGCGG TAGTTAAATGCGAAA EcSMS35_1168 1184144 - 1184326 + | hypothetical protein EcSMS35_1169 1184319 - 1184495 + | hypothetical protein EcSMS35_1170 1184492 - 1185007 + | hypothetical protein EcSMS35_1171 1185211 - 1185339 + | hypothetical protein TERM 1536 1185486 - 1185436 - f 78 -6.3 -4.64844 | gap 1, opp_overlap 1185454 1185482 GGCAGATAGAGAAAA GCCCCAG-TTAACATTACGCGTCC TGCA AGACGTTTAACATTAATCTGAGGC CCAATCTATGCTTCA TERM 1537 1185580 - 1185565 - f 85 -9 -4.36411 | TATGAAGCAGCAAAA GGCGAT GTTA ATCGCC CTGATCGTCATCTGT TERM 1538 1185735 - 1185714 - f 77 -11.5 -2.77416 | opp_overlap 1185711 1185709, overlap 1185707 1185709 AGGAGTAAGAGACCA GGCGGGGGA GAAA TCCCTCGCC ACCTCTGATGTGTCA TERM 1539 1185777 - 1185790 + F 100 -9.5 -5.77734 | opp_overlap 1185777 CGCACCCGCACTTAA CCCGC TTCG GCGGG TTTTTGTTTTTATTT TERM 1540 1185790 - 1185777 - f 71 -9.5 -3.06183 | opp_overlap 1185777 CGCACCCGCACTTAA CCCGC TTCG GCGGG TTTTTGTTTTTATTT EcSMS35_1172 1185927 - 1186187 + | hypothetical protein EcSMS35_1173 1186332 - 1186201 - | hypothetical protein EcSMS35_1174 1186534 - 1187589 + | hypothetical protein EcSMS35_1175 1187590 - 1187955 + | crossover junction endodeoxyribonuclease RusA-like protein EcSMS35_1176 1187952 - 1188641 + | antitermination protein Q TERM 1541 1188734 - 1188699 - f 91 -11.2 -4.14243 | opp_overlap 1188709, overlap 1188704 1188709 TACGTGATGGCAAAA GCAAACAAAACCCGCC CACA AGCGGGTTTTTTGTGC CACTTATCTCGGATA TERM 1542 1188729 - 1188704 - f 80 -8.3 -4.20806 | opp_overlap 1188709, overlap 1188699 1188709 GATGGCAAAAGCAAA CAAAACCCGCC CACA AGCGGGTTTTT TGTGCCACTTATCTC TERM 1543 1188709 - 1188724 + F 91 -7.5 -5.25803 | opp_overlap 1188704 1188699 1188709 CAAAAGCAAACAAAA CCCGC CCACAA GCGGG TTTTTTGTGCCACTT TERM 1544 1188724 - 1188709 - f 87 -8.2 -5.08483 | opp_overlap 1188709, overlap 1188704 1188699 CAAAAGCAAACAAAA CCCGCC CACA AGCGGG TTTTTTGTGCCACTT TERM 1545 1189353 - 1189366 + F 100 -9.5 -5.46706 | GTATATATCGTTTCG CCCGC TTTT GCGGG TTTTTCTTTTCAAAT EcSMS35_1181 1189437 - 1189652 + | lambda phage S protein family protein EcSMS35_1182 1189657 - 1190007 + | hypothetical protein EcSMS35_1183 1190071 - 1190604 + | phage lysozyme TERM 1546 1190747 - 1190721 - g 95 -7.2 -5.252 | overlap 1190723 1190725 CAGCGTGATAAAAAA GTCAGTGAGCTG AAG CAGCTGACCGCC ACCATCGCTGACATG EcSMS35_1184 1190601 - 1191068 + | bacteriophage lysis protein EcSMS35_1185 1191610 - 1192092 + | P27 family phage terminase small subunit TERM 1547 1192167 - 1192183 + G 75 -4.4 -4.74215 | gap 1, overlap 1192170 GCTGGCGAATTTGTC CGCCTGG CCTG CCAG-CG TTTTCTTGATGATCT TERM 1548 1192297 - 1192329 + G 73 -9.1 -3.59935 | opp_overlap 1192288, overlap 1192289 1192295 1192300 TAAAAGGGGCGCTGG CAGGCCAGCCCATTG AGT TGATGGACTGGCATG TATTTATCCTCATTA TERM 1549 1192635 - 1192617 - g 75 -6.7 -4.39828 | gap 1, opp_overlap 1192619, overlap 1192619 AATATGGTCAGAAAA GCCCG-GT CGAC ACTCGGGC GGTTGTTTGATTTCA TERM 1550 1192619 - 1192637 + G 72 -6.6 -4.15396 | opp_overlap 1192617 1192619 TATGGTCAGAAAAGC CCGGTCGA CAC TCGGGCGG TTGTTTGATTTCAAC EcSMS35_1186 1192092 - 1193849 + | putative phage terminase, large subunit EcSMS35_1187 1193861 - 1194043 + | hypothetical protein TERM 1551 1194153 - 1194184 + G 74 -2.2 -5.1675 | gap 1, opp_overlap 1194155, overlap 1194155 TACCGGAAAGCAGAT CAGCAGTCAG-CG GGCCATG CGACTGACGGCGG TTTTTTCCTGCGTCA EcSMS35_1188 1194043 - 1195284 + | HK97 family phage portal protein TERM 1552 1195576 - 1195595 + G 100 -13.6 -4.21607 | opp_overlap 1195576 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG TERM 1553 1195595 - 1195576 - g 95 -13.6 -3.33261 | opp_overlap 1195576 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG TERM 1554 1195807 - 1195773 - g 100 -2.7 -5.80817 | overlap 1195774 1195779 CCGAACAGAAAAAAA TCGAAAGAGTCCTGC GTGAT GTCGGACTCTCCCGT ACCCAGGCCAAAGCA EcSMS35_1189 1195262 - 1195912 + | HK97 family phage prohead protease TERM 1555 1196049 - 1196038 - g 81 -5.8 -4.77438 | overlap 1196044 ATTGAGCAGGAAAAA GGCA AACT TGCC GGGCAGGTGGAAACC EcSMS35_1190 1195927 - 1197132 + | HK97 family phage major capsid protein TERM 1556 1197138 - 1197163 + F 100 -14.7 -3.30124 | opp_overlap 1197136, overlap 1197141 AGCGGCGTAATCATT CATGGGGCGCA GAAG TGCGCCCCCTG TTCTGACAGGTGAAA TERM 1557 1197141 - 1197160 + F 89 -15 -2.5294 | opp_overlap 1197136, overlap 1197138 GGCGTAATCATTCAT GGGGCGCA GAAG TGCGCCCC CTGTTCTGACAGGTG EcSMS35_1191 1197184 - 1197372 + | hypothetical protein EcSMS35_1192 1197384 - 1197689 + | hypothetical protein EcSMS35_1193 1198036 - 1198482 + | HK97 family phage protein EcSMS35_1194 1198479 - 1198823 + | hypothetical protein TERM 1558 1198845 - 1198859 + F 100 -12.8 -5.79595 | TAATGATTTTACCCA CCCGCC GCT GGCGGG TTTTTTATTTTCAGG EcSMS35_1195 1198883 - 1199587 + | hypothetical protein EcSMS35_1196 1199602 - 1199973 + | phage tail assembly chaperone TERM 1559 1200094 - 1200115 + G 73 -11.5 -2.62616 | AATTTGACAGGTTCA GCCCGCTGG GTGA CGAGCGGGC TGATATCCGGGCTGC EcSMS35_1197 1199985 - 1200275 + | hypothetical protein TERM 1560 1200286 - 1200297 + F 100 -7.2 -5.52384 | opp_overlap 1200286, overlap 1200285 AGTGAGTCAACATAA CCGC TTCG GCGG TTTTTTTCGTCCGGA TERM 1561 1201342 - 1201313 - g 78 -9.3 -3.92373 | overlap 1201300 TACTGCAGCCAGAAA CGAAGTGGCTCTT GCTG AAGCGCAACTTCG GGGGACACAGATAGC TERM 1562 1201942 - 1201928 - g 75 -7.2 -4.36596 | TGCAGAAGCAACAAA TCAACT GGC AGTTGA ACAGTCCCGTCTCAC EcSMS35_1198 1200321 - 1203548 + | lambda family phage tail tape measure protein EcSMS35_1199 1203541 - 1203882 + | phage minor tail protein TERM 1563 1203936 - 1203925 - g 70 -5.8 -4.2717 | ATGAGTGCACTAAAA CGGA GCAA TCCG CGCTGGTCGTGCTCT TERM 1564 1204031 - 1204017 - g 80 -5.7 -4.94972 | GAGCAGAACGAAAAA GGTGA ACCAG TCACC TGGCAGGGGCGGCAG TERM 1565 1204193 - 1204213 + G 90 -9.7 -4.42653 | overlap 1204195 CGGCGGAACGGTGGT CCGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT EcSMS35_1200 1203882 - 1204580 + | phage minor tail protein L TERM 1566 1204611 - 1204595 - gf 71 -9.5 -3.03214 | overlap 1204597 AACCCATGACAGAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA EcSMS35_1201 1204585 - 1205328 + | tail assembly protein EcSMS35_1202 1205226 - 1205873 + | bacteriophage lambda tail assembly protein I TERM 1567 1205890 - 1205913 + F 71 -9.6 -3.01125 | opp_overlap 1205895, overlap 1205895 GAAAAATGTTTTATG TGAAACCGCC TGCG GGCGGTTTTG TCGTTTATGGAGCGT TERM 1568 1205908 - 1205895 - f 77 -9.5 -3.60098 | opp_overlap 1205890 1205895 ATGTTTTATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 1569 1205895 - 1205908 + F 91 -9.5 -4.64846 | opp_overlap 1205895, overlap 1205890 ATGTTTTATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 1570 1206084 - 1206064 - g 90 -7.5 -4.7497 | TGGATGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CAGTGCTGGACAGTG TERM 1571 1208130 - 1208142 + G 78 -9.1 -3.96148 | opp_overlap 1208122 CAGATAACTGCCACG CCGCA TCT TGCGG TTTATGATCCGACGG TERM 1572 1208367 - 1208380 + G 79 -4.5 -5.00616 | overlap 1208351 CCGAGTGATGATGCA TCCGG CTAT CTGGA TTTTTTCAAAGGCGA TERM 1573 1208540 - 1208529 - g 74 -5.8 -4.45068 | ACCGTCAATAAGAAA CTGG AAGA CCAG AGTGCGGCAATTCAG EcSMS35_1203 1205934 - 1209413 + | fibronectin type III domain-containing protein TERM 1574 1209433 - 1209450 + F 100 -11.3 -5.4505 | opp_overlap 1209424 1209431 TATAACCCCAATACG GGCGTCA GAAA TGACGCC TTTTTTATTGCAGAA EcSMS35_1204 1209481 - 1210080 + | entero Ail/Lom family protein TERM 1575 1210127 - 1210108 - Tf 79 -12.1 -2.79501 | opp_overlap 1210108 CACAGTGTTATGACA GCCCGCC GGTTCA GGCGGGC TTTTTTGTGGAGTGG TERM 1576 1210108 - 1210127 + TF 100 -12.1 -5.26316 | opp_overlap 1210108 CACAGTGTTATGACA GCCCGCC GGTTCA GGCGGGC TTTTTTGTGGAGTGG TERM 1577 1210177 - 1210161 - gT 71 -3 -4.77036 | overlap 1210163 TGGCAGCAGTAAAAA TCTCAG GTGTG CTGAAA GATGGTGCGGGAAAA EcSMS35_1205 1213427 - 1212522 - | IS2 transposase orfB EcSMS35_1206 1210145 - 1212682 + | putative prophage side tail fiber protein EcSMS35_1207 1213795 - 1213385 - | IS2 transposase orfA TERM 1578 1213891 - 1213906 + G 81 -10.4 -3.86897 | overlap 1213901 CAAATTTGCCGACAG GGCCGA CTTT TCGGCC TTTATGGAGAGTGCC EcSMS35_1208 1213859 - 1214140 + | hypothetical protein EcSMS35_1209 1214150 - 1215190 + | hypothetical protein TERM 1579 1215196 - 1215212 + F 73 -5 -4.67982 | opp_overlap 1215197, overlap 1215197 GTCTAAATAATATCA AGGGGC CGAGC GCCCCG TTTTATTGGGTAGGA TERM 1580 1215211 - 1215197 - f 71 -8.5 -3.50555 | opp_overlap 1215196 1215197 TCTAAATAATATCAA GGGGC CGAGC GCCCC GTTTTATTGGGTAGG EcSMS35_1210 1215227 - 1215520 + | hypothetical protein TERM 1581 1215570 - 1215537 - T 91 -8.1 -5.2197 | opp_overlap 1215533 TATAAAAAGTAAAAA GCCGCAGTAACTTGT CATG ATAGGATACTGCGGC TGGCTGGTTAACTTT TERM 1582 1215718 - 1215688 - T 89 -2.6 -5.63504 | gap 1, overlap 1215689 AAGCTGAGAAAAAAA GCGTG-CTTACCC AATCTG GGGTAAATCACGT CTGAATGACACCTGA EcSMS35_1211 1217031 - 1216501 - | nickel-dependent hydrogenase, b-type cytochrome subunit TERM 1583 1217283 - 1217251 - R 72 -9.4 -3.14602 | gap 1, overlap 1217249 GTTAGCTTATTAATA TACAGACACG-TCAT AGTG ATGAGCATGTCTGTA GCTAGCTTGCGTTCA EcSMS35_1212 1218024 - 1217374 - | metal-binding protein EcSMS35_1213 1218916 - 1218281 - | hypothetical protein EcSMS35_1214 1219921 - 1218917 - | oxidoreductase, molybdopterin binding TERM 1584 1220001 - 1220012 + r 70 -5.8 -4.33907 | opp_overlap 1220001 TCCTCCCTAACAGTA GCAG AGAT CTGC TTTTACATATTTATG EcSMS35_1215 1220443 - 1220030 - | transthyretin family protein EcSMS35_1216 1220465 - 1221247 + | heavy metal response regulator EcSMS35_1217 1221247 - 1222605 + | heavy metal sensor histidine kinase TERM 1585 1222677 - 1222645 - T 100 -12.8 -5.055 | gap 1, opp_overlap 1222644 1222645 TTAACCGTGAAAAAA CGCAGCCACGTC-GT GAGT ACTAACGCGGCTGCG ATTGATTAGCGCTTA hchA 1223563 - 1222712 - | chaperone protein HchA EcSMS35_1219 1223727 - 1223584 - | hypothetical protein TERM 1586 1224082 - 1224111 + G 85 -13.7 -2.8032 | opp_overlap 1224082, overlap 1224079 1224077 AATGCCAATAAAAAA GCCTGAGTTCG ATGAGGGA CGAACTCAGGC TAGTGTTAAGTTTTA TERM 1587 1224111 - 1224082 - g 100 -13.7 -5.4756 | opp_overlap 1224079 1224077 1224082 AATGCCAATAAAAAA GCCTGAGTTCG ATGAGGGA CGAACTCAGGC TAGTGTTAAGTTTTA EcSMS35_1220 1223987 - 1224154 + | hypothetical protein EcSMS35_1221 1225318 - 1224155 - | porin family protein TERM 1588 1224331 - 1224311 - G 72 -10.5 -3.10612 | opp_overlap 1224310 TCCAATTTCAACATA GTTGACCAG ATC CTGATCAAC ATACTCTTGATGACC TERM 1589 1225655 - 1225639 - H 100 -13.7 -5.97575 | AAGGCATAAAAAAAA GCCGGCA TCA TGCCGGC CCAAAAAATATAAAC TERM 1590 1225805 - 1225793 - H 76 -4.1 -5.13648 | overlap 1225788 CAAAGATAAATAAAA TCGCT CAA AACGA TTTTTCCTGTATTCA EcSMS35_1222 1225949 - 1226251 + | hypothetical protein EcSMS35_1223 1226291 - 1226986 + | putative metal-dependent phosphohydrolase TERM 1591 1227024 - 1227044 + F 91 -13.3 -3.15999 | AATTATGTTAACCTG TCGGCCATC TCA GATGGCCGG TTAAATCTATGCAGG dcm 1227053 - 1228471 + | DNA-cytosine methyltransferase vsr 1228452 - 1228922 + | very short patch repair protein EcSMS35_1225 1229831 - 1228911 - | carboxylate/amino acid/amine transporter EcSMS35_1227 1230010 - 1230921 + | hypothetical protein EcSMS35_1228 1231000 - 1231182 + | hypothetical protein TERM 1592 1231225 - 1231197 - f 100 -23.3 -3.22491 | opp_overlap 1231202, overlap 1231185 AAAGGGTATCATTAA CACCAGGCCGGAT CAC ATCCGGCCTGGTG TGCCAATGCCTGCAA TERM 1593 1231202 - 1231220 + F 89 -14.6 -2.62983 | opp_overlap 1231197 1231185 GTATCATTAACACCA GGCCGGAT CAC ATCCGGCC TGGTGTGCCAATGCC EcSMS35_1230 1231371 - 1233047 + | diguanylate cyclase EcSMS35_1229 1233859 - 1233044 - | mannosyl-3-phosphoglycerate phosphatase-like protein TERM 1594 1234118 - 1234139 + r 100 -15.9 -5.88565 | opp_overlap 1234113 CTTAAGCAAGTTTCA TCCCGACCC CTCA GGGTCGGGA TTTTTTTATTGTGCA EcSMS35_1231 1234383 - 1234156 - | hypothetical protein EcSMS35_1232 1234546 - 1234734 + | hypothetical protein TERM 1595 1234782 - 1234735 - T 80 -10.6 -3.36415 | opp_overlap 1234742 1234744, overlap 1234736 GAGAAAGCAGAGTAA TCTAATTCAGCCTGACTGGTGG GAAA CCACCAGTCAGAATGTGTTAGC GCATGTTGACAAAAA TERM 1596 1234781 - 1234736 - T 87 -14.1 -2.61126 | opp_overlap 1234742 1234744, overlap 1234735 AGAAAGCAGAGTAAT CTAATTCAGCCTGACTGGTGG GAAA CCACCAGTCAGAATGTGTTAG CGCATGTTGACAAAA TERM 1597 1234742 - 1234775 + T 87 -13.9 -3.04248 | opp_overlap 1234736 1234735, overlap 1234744 CAGAGTAATCTAATT CAGCCTGACTGGTGG GAAA CCACCAGTCAGAATG TGTTAGCGCATGTTG TERM 1598 1234744 - 1234773 + T 76 -10.7 -3.07522 | opp_overlap 1234736 1234735, overlap 1234742 GAGTAATCTAATTCA GCCTGACTGGTGG GAAA CCACCAGTCAGAA TGTGTTAGCGCATGT rcsA 1235401 - 1234778 - | colanic acid capsular biosynthesis activation protein A fliR 1236476 - 1235691 - | flagellar biosynthetic protein FliR fliQ 1236754 - 1236485 - | flagellar biosynthetic protein FliQ fliP 1237501 - 1236764 - | flagellar biosynthetic protein FliP TERM 1599 1237102 - 1237114 + g 70 -4.7 -4.57073 | opp_overlap 1237098, overlap 1237096 GCATAAACTCACGCA GCGGC TGC GCCCC TTTTTCCAGCGCCTC fliO 1237866 - 1237501 - | flagellar protein FliO fliN 1238282 - 1237869 - | flagellar motor switch protein FliN fliM 1239283 - 1238279 - | flagellar motor switch protein FliM fliL 1239752 - 1239288 - | flagellar basal body-associated protein FliL fliK 1240984 - 1239857 - | flagellar hook-length control protein Flik fliJ 1241424 - 1240981 - | flagellar protein FliJ TERM 1600 1241483 - 1241465 - R 72 -8.8 -3.63922 | overlap 1241463 ACTGTCGGGAAAATA CGCTCCAG CCC CTGGAGAG ACGCTTCCCAGTCCG fliI 1242816 - 1241443 - | flagellar protein export ATPase FliI TERM 1601 1242221 - 1242197 - G 74 -8.5 -3.95584 | CGTTCACCAATCAAA CCCACGACAAT GAC ATCGGCGCGGG TGTAACGGGCCATCA TERM 1602 1242614 - 1242586 - G 70 -3.8 -4.72986 | overlap 1242588 CAGCGGCATTAAAAA CAGCCGTTGACC GTTAA AGCCAACGACTT CGCTTTCTACTTCGT fliH 1243502 - 1242816 - | flagellar assembly protein FliH fliG 1244490 - 1243495 - | flagellar motor switch protein FliG fliF 1246141 - 1244483 - | flagellar M-ring protein FliF TERM 1603 1245124 - 1245140 + g 70 -5.7 -4.38472 | overlap 1245125 TATTGCTGGTGGTGC TCGCCTG CTG CTGGCGG TTATTTTGATTTGCC TERM 1604 1246544 - 1246530 - g 79 -4.3 -4.88067 | ACGCAGGCAGAAAAA TTCAC TCTCG GTGAA CCCGGCGTGGCGTTA fliE 1246356 - 1246670 + | flagellar hook-basal body complex protein (FliE) EcSMS35_1248 1247021 - 1248160 + | hypothetical protein TERM 1605 1248293 - 1248259 - T 82 -7.9 -4.55295 | overlap 1248283 CTGGTGATAAATAAA GACGCAGCACGTC GAATGCAAG AATGTGCTGCGTC TGGCTCAAAGCAACT EcSMS35_1249 1248777 - 1248298 - | acetyltransferase EcSMS35_1250 1249556 - 1248888 - | hypothetical protein TERM 1606 1249659 - 1249631 - R 79 -11.7 -2.83748 | opp_overlap 1249627 1249626 1249624, overlap 1249623 1249628 ATACAAAGGTAACGA TGTTCCCGCTGTG GGT CACAGCGGGAATG AGGGATTACTTCTGA EcSMS35_1251 1249898 - 1249665 - | hypothetical protein EcSMS35_1252 1251100 - 1249895 - | hypothetical protein TERM 1607 1251689 - 1251674 - g 72 -8.2 -3.85698 | GCTGCGCTGGATAAA GCGCCG TTAC CGACGC CATTGCCGTAATGAA EcSMS35_1253 1251287 - 1251700 + | putative lipoprotein TERM 1608 1251706 - 1251731 + T 77 -11.2 -2.79505 | gap 1, opp_overlap 1251706, overlap 1251705 1251708 ATTGCCGTAATGAAA TC-TCCCCGGC TTGCC GCCGGGGATGA ATTTAAATCACCTCT TERM 1609 1251731 - 1251706 - T 91 -11.2 -3.90291 | gap 1, opp_overlap 1251705 1251706 1251708 ATTGCCGTAATGAAA TC-TCCCCGGC TTGCC GCCGGGGATGA ATTTAAATCACCTCT TERM 1610 1251708 - 1251728 + T 86 -14 -2.66272 | opp_overlap 1251706, overlap 1251706 1251705 TGCCGTAATGAAATC TCCCCGGC TTGCC GCCGGGGA TGAATTTAAATCACC amyA 1253221 - 1251734 - | alpha-amylase, cytoplasmic fliT 1253664 - 1253299 - | flagellar protein FliT fliS 1254074 - 1253664 - | flagellar protein FliS fliD 1255505 - 1254099 - | flagellar hook-associated protein 2 TERM 1611 1257132 - 1257122 - g 71 -3.2 -4.87592 | overlap 1257124 GCACAGAGAATAAAA CATC GAA GACG TCCGATCCATTGGCT fliC 1255771 - 1257408 + | flagellin FliC EcSMS35_1259 1257654 - 1257535 - | hypothetical protein TERM 1612 1257583 - 1257599 + g 100 -15.1 -5.28176 | opp_overlap 1257580 GTCAGCAACGTACAT CCCCGCC ACC GGCGGGG TTTTTTCTGCCTGGA TERM 1613 1257771 - 1257783 + G 71 -9.1 -3.49653 | opp_overlap 1257770 1257769 TAATGGATAAACACT CGCTG TGG CAGCG TTATGTCCCGCTGGT TERM 1614 1258333 - 1258310 - g 72 -4.6 -4.59773 | CCGGAGCGCGAAAAA CTGGTATTAA CCCT CTATTACCAG GAAGAGCTGAATCTC fliA 1257728 - 1258447 + | RNA polymerase sigma factor for flagellar operon TERM 1615 1258724 - 1258746 + G 84 -4.1 -5.17054 | overlap 1258701 CGATTTTGCGGTGAT TTACACTGC AAAAC GCAGAGTGA TTTTTTCGATATTAT EcSMS35_1261 1258493 - 1259044 + | FliZ protein TERM 1616 1259608 - 1259585 - g 79 -2.3 -5.22039 | CTGAAAGGCAAAAAA GTGGGTGTC GGTCTG GGCACCAAC TATGAAGAGTGGCTG TERM 1617 1259768 - 1259754 - g 84 -7.8 -4.63486 | ATCTGGTGAAGAAAA CCAACG ATA CGCTGG CAGTAACCGGTGAAG fliY 1259132 - 1259932 + | cystine-binding periplasmic protein TERM 1618 1259971 - 1259952 - f 87 -4.9 -5.39755 | opp_overlap 1259953, overlap 1259953 CATAATGACAAAAAA GGGCGCT TTCACT AGCGCCT TTTTTATTTACGCGT TERM 1619 1259953 - 1259970 + F 100 -8.4 -5.63517 | opp_overlap 1259953 1259952 ATAATGACAAAAAAG GGCGCT TTCACT AGCGCC TTTTTTATTTACGCG TERM 1620 1259970 - 1259953 - f 75 -8.4 -3.82226 | opp_overlap 1259953, overlap 1259952 ATAATGACAAAAAAG GGCGCT TTCACT AGCGCC TTTTTTATTTACGCG dcyD 1260037 - 1261023 + | D-cysteine desulfhydrase TERM 1621 1261189 - 1261204 + G 81 -4.6 -5.08178 | overlap 1261190 CGCCGATCTGGCCCG TGCGCT GGCT GGCGCG TTTTTATATCTCTAT TERM 1622 1261481 - 1261493 + G 72 -7.7 -3.95787 | GGTGGCGTTGCCGCC GCTGT CGA ACAGC TTTATCAGTCTGGTA EcSMS35_1264 1261038 - 1261706 + | L-cystine ABC transporter, permease protein TERM 1623 1262319 - 1262345 + G 81 -6.4 -4.82901 | opp_overlap 1262314, overlap 1262321 CGCACGAAATGAGCT TTGCCCGGGATG TTG CGGACCGGGCGA TTTTTATGGACCAGG yecC 1261703 - 1262455 + | amino acid ABC transporter, ATP-binding protein TERM 1624 1262496 - 1262466 - f 100 -5.3 -5.70522 | gap 1, opp_overlap 1262490 1262491, overlap 1262467 1262469 AATAATAAGAAAAAA TCAGCCCCGAC-GA TTCA CCTGTCGGGGCGGG ACGCCATTTCAAGCC TERM 1625 1262495 - 1262467 - f 76 -8.8 -3.98653 | gap 1, opp_overlap 1262490 1262491, overlap 1262466 1262469 ATAATAAGAAAAAAT CAGCCCCGAC-GA TTCA CCTGTCGGGGCGG GACGCCATTTCAAGC TERM 1626 1262493 - 1262469 - f 77 -10 -3.54636 | gap 1, opp_overlap 1262490 1262491, overlap 1262467 1262466 AATAAGAAAAAATCA GCCCCGAC-GA TTCA CCTGTCGGGGC GGGACGCCATTTCAA sdiA 1262685 - 1263407 + | regulatory protein SdiA TERM 1627 1263435 - 1263471 + T 86 -12.4 -3.14051 | opp_overlap 1263440, overlap 1263440 CTGCGTGCCAGATGC AAAAACCGGCTGAAAG GCACG CTCTCAGCCGGTTTTA TATTACTGACGGTAG TERM 1628 1263466 - 1263440 - T 100 -14.5 -4.70659 | opp_overlap 1263435 1263440 TGCCAGATGCAAAAA CCGGCTGAAAG GCACG CTCTCAGCCGG TTTTATATTACTGAC TERM 1629 1263440 - 1263466 + T 100 -12.3 -4.70583 | opp_overlap 1263440, overlap 1263435 TGCCAGATGCAAAAA CCGGCTGAAAG GCACG CTCTCAGCCGG TTTTATATTACTGAC EcSMS35_1267 1263698 - 1263474 - | hypothetical protein TERM 1630 1263546 - 1263557 + g 81 -5.8 -4.77986 | GGTTTCGTCTTCGAT CAGC GCAA GCTG TTTTTCCATCTTTAA EcSMS35_1268 1263790 - 1263918 + | hypothetical protein TERM 1631 1263907 - 1263918 + F 73 -4.4 -4.80167 | ATTAATGTTACATAT TCAG CGGG CTGA TTTTCATTTTTGCTG uvrY 1264157 - 1264813 + | response regulator UvrY uvrC 1264810 - 1266642 + | excinuclease ABC, C subunit pgsA 1266699 - 1267247 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1632 1267441 - 1267425 - f 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 1633 1267505 - 1267483 - f 74 -7.7 -4.13767 | CGCTCCAGTTTAAAA GACATCGGC GTCAA GCGGATGTC TGGCTGAAAGGCCTG TERM 1634 1267660 - 1267640 - f 72 -10.5 -2.89742 | overlap 1267643 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGTTCGCGCTGTGC TERM 1635 1267657 - 1267643 - f 72 -8.6 -3.5947 | overlap 1267640 AATCGGTAGACACAA GGGATT TAA AATCCC TCGGCGTTCGCGCTG TERM 1636 1267748 - 1267761 + F 100 -8.1 -5.64274 | opp_overlap 1267748 AGCAGTGTCGTGAAA CCACC TTCG GGTGG TTTTTTTGTGCCTGC TERM 1637 1267843 - 1267831 - f 78 -6.3 -4.69027 | AAAGCCACTCAAAAA GTATC TCT GATAC GGACCGGCATGTAAG EcSMS35_1275 1267897 - 1268562 + | SEC-C domain-containing protein tyrP 1269835 - 1268624 - | tyrosine-specific transport protein TERM 1638 1268874 - 1268864 - G 72 -8.2 -3.7229 | overlap 1268865 ATAAAACAGTGCAAA CGCC AAC GGCG GCAGAAACGTAATTG EcSMS35_1277 1270026 - 1270265 + | hypothetical protein TERM 1639 1270295 - 1270273 - T 100 -16.3 -3.61178 | overlap 1270286 GTCACTGATTTGAAA CGGCGGCAG TAAAC CTGCCGCCG GAGAGCATTAGTTTT ftnA 1270800 - 1270303 - | ferritin-1 EcSMS35_1279 1270825 - 1270962 + | hypothetical protein TERM 1640 1270962 - 1270940 - T 76 -10.6 -3.07816 | opp_overlap 1270933 1270932 CCGCTATTTATTTAA TCAGCGAAGA TCC CCCTCGCTGA TTAAAACGTTTAGAG EcSMS35_1280 1271226 - 1270972 - | putative lipoprotein TERM 1641 1271378 - 1271366 - R 75 -9.1 -3.64488 | opp_overlap 1271365 1271362 1271353 1271366, overlap 1271364 AATGGCCGGAAAAGA CGCCT GGC AGGCG CTATTTCTTGCCATC TERM 1642 1271454 - 1271481 + r 70 -7.2 -3.89607 | opp_overlap 1271453, overlap 1271471 ATAACATTAAAAGGG TATTTATGTGAT TTGT ATCACATAAAGA TTGATTTTTGTGATG EcSMS35_1281 1271647 - 1271501 - | hypothetical protein TERM 1643 1271672 - 1271645 - G 72 -10 -3.30007 | opp_overlap 1271645 1271652, overlap 1271652 AATATGTTCCGATAA CAAAAAACCTGC TCCG GCAGGTTTTTTT GTGTCCTGGTGACGG TERM 1644 1271665 - 1271652 - H 100 -8.1 -5.55769 | opp_overlap 1271645 1271652, overlap 1271645 TCCGATAACAAAAAA CCTGC TCCG GCAGG TTTTTTTGTGTCCTG TERM 1645 1271652 - 1271665 + H 100 -8.1 -5.74122 | opp_overlap 1271652 1271645, overlap 1271645 TCCGATAACAAAAAA CCTGC TCCG GCAGG TTTTTTTGTGTCCTG EcSMS35_1282 1271759 - 1272010 + | hypothetical protein TERM 1646 1272015 - 1272042 + T 100 -13.5 -3.86822 | opp_overlap 1272015 AATCCCATTAAAAAA CCGCTGCTTCA AAAAGA TGAGGCAGCGG TTTCTCAAAAACTTC TERM 1647 1272042 - 1272015 - T 100 -11.3 -5.16237 | opp_overlap 1272015 AATCCCATTAAAAAA CCGCTGCTTCA AAAAGA TGAGGCAGCGG TTTCTCAAAAACTTC TERM 1648 1272087 - 1272054 - T 100 -13.3 -4.56597 | gap 1, overlap 1272056 GCGGTTTCTCAAAAA CTTCATCGGCGC-AAT TGC ATTAGCGCCGATGACG ATCAATGCAGCTGAT TERM 1649 1272085 - 1272056 - T 87 -14.5 -2.60032 | gap 1, overlap 1272054 GGTTTCTCAAAAACT TCATCGGCGC-AAT TGC ATTAGCGCCGATGA CGATCAATGCAGCTG EcSMS35_1283 1272592 - 1272089 - | ferritin family protein TERM 1650 1272191 - 1272214 + g 70 -5.2 -4.41633 | ATCAAGAATGGTTTG CAGCAACAGG CCAT CATGCTGCTG TTCTTTTTCCAGATC EcSMS35_1284 1272741 - 1272890 + | hypothetical protein TERM 1651 1273149 - 1273171 + F 82 -7.8 -4.55544 | opp_overlap 1273151 1273154, overlap 1273151 ATCTGCTGTGCACTA GACAATTTGT CAG ACAAATTGGC TTTTCCTTATGTCTT TERM 1652 1273334 - 1273346 + F 78 -6.3 -4.62069 | opp_overlap 1273334 TTCCGATTAATTTAA CGAAT GTC ATTCG TTTTTGCCCTACACA araF 1273388 - 1274377 + | L-arabinose ABC transporter, periplasmic L-arabinose-binding protein TERM 1653 1274417 - 1274391 - f 93 -10.8 -4.57341 | overlap 1274392 1274393 AATTTGCCGGAAAAA TTCCCCTCTGCA TGA TGCAGAGGGGGT GTGAACGACCAGTGA TERM 1654 1274416 - 1274392 - f 100 -14.3 -3.33922 | overlap 1274391 1274393 ATTTGCCGGAAAAAT TCCCCTCTGCA TGA TGCAGAGGGGG TGTGAACGACCAGTG TERM 1655 1274415 - 1274393 - f 100 -17.8 -2.60032 | overlap 1274392 1274391 TTTGCCGGAAAAATT CCCCTCTGCA TGA TGCAGAGGGG GTGTGAACGACCAGT araG 1274447 - 1275961 + | L-arabinose ABC transporter, ATP-binding protein araH 1275976 - 1276962 + | L-arabinose ABC transporter, permease protein TERM 1656 1277001 - 1277026 + F 100 -12.6 -3.81414 | opp_overlap 1277003 CGTTTTTTCCCACCA CAGCCAGCCG CCACAA CGGTTGGCTG TTCTTCATTGCAAAT TERM 1657 1277695 - 1277708 + GF 75 -9.5 -3.5241 | overlap 1277692 1277702 GGAAGCTCCCTTTAT CGGGC GAAC GCCCG TATTTCTGGGCGATG otsB 1277129 - 1277929 + | trehalose-phosphatase otsA 1277904 - 1279328 + | alpha,alpha-trehalose-phosphate synthase (UDP-forming) uspC 1279763 - 1279335 - | universal stress protein C TERM 1658 1279421 - 1279388 - G 85 -14.1 -2.75382 | gap 1, opp_overlap 1279386, overlap 1279385 CACTTGAGGCAATCA CTCTTTTCGCCGAGCA GGA TGCTC-GCGAAAAGAA ACTGTGATTGTGATT TERM 1659 1280264 - 1280283 + H 77 -9.4 -3.63515 | AGTAATTGAGTGTTT TGTGTGAT CTGC ATCACACA TTATTGAAAATCGCA EcSMS35_1291 1280427 - 1280543 + | hypothetical protein flhD 1280543 - 1280893 + | flagellar transcriptional activator FlhD flhC 1280896 - 1281474 + | flagellar transcriptional activator FlhC TERM 1660 1281501 - 1281524 + F 100 -12.5 -5.75342 | AGGCGCAACATTCCA GCAGCGGTA ACGACG TACCGCTGC TTTTTTTTGCCCCAA TERM 1661 1282217 - 1282237 + G 70 -3.9 -4.72029 | TTATCGCACATGCGA TGGTGGGGA CTT TCCTCGGCA TTTTATTGGCTTACG motA 1281601 - 1282488 + | chemotaxis protein MotA TERM 1662 1283373 - 1283355 - g 85 -8.8 -4.56775 | AGCGCCCTGGAAAAA CCTGAGGT TGC ACCACAGG TCAGTGTTCCCACAA motB 1282485 - 1283411 + | chemotaxis protein MotB TERM 1663 1283825 - 1283803 - g 76 -11.2 -3.41527 | overlap 1283809 CAACTGGCATTAGAA GCGAAAGGCG AAA CGCCATCCGC AGTGACCCGATTAAG TERM 1664 1283819 - 1283809 - g 72 -8.2 -3.82083 | overlap 1283803 GCATTAGAAGCGAAA GGCG AAA CGCC ATCCGCAGTGACCCG TERM 1665 1285191 - 1285175 - g 72 -7.9 -3.89346 | opp_overlap 1285173 1285184 TGGTGATCTTACAAA GTGGCGG TCG CCGCTAC GCCTTGCTGGTGGAT cheA 1283422 - 1285380 + | chemotaxis protein CheA TERM 1666 1285858 - 1285848 - g 71 -3.2 -4.74706 | opp_overlap 1285856 GTGAACATCGAAAAA CTGC TGA ACAG CGAAGAGATGGCGCT cheW 1285401 - 1285904 + | chemotaxis adaptor protein CheW TERM 1667 1285933 - 1285953 + F 100 -8.3 -5.67283 | opp_overlap 1285929 1285933 CTCAATTGAAATGAA CCCGATG ATCTGCG CATCGGG TTTTTTATTTCAATT TERM 1668 1285953 - 1285933 - f 72 -8.3 -3.57106 | opp_overlap 1285933, overlap 1285929 CTCAATTGAAATGAA CCCGATG ATCTGCG CATCGGG TTTTTTATTTCAATT TERM 1669 1286804 - 1286827 + G 73 -9.6 -3.64822 | opp_overlap 1286823, overlap 1286792 GGGCGACCTGGCGCA GAGCGTTTCA CATA TGCAACGCTC TTTGACTGACACCGT tar 1286049 - 1287710 + | methyl-accepting chemotaxis protein II TERM 1670 1288145 - 1288126 - g 74 -6.4 -4.46757 | overlap 1288117 AAGAGACGGAGAAAA GTTTTGCC CGCT GGCACAAC GATCTCGAACATCAG TERM 1671 1288754 - 1288739 - g 74 -2.4 -5.055 | overlap 1288740 1288741 1288750 GGAACTGGCAAAAAA TGCCGC GACA ACGGCG CAGGCGGGCGGTGTT tap 1287756 - 1289357 + | methyl-accepting chemotaxis protein IV cheR 1289376 - 1290236 + | chemotaxis protein methyltransferase CheR cheB 1290239 - 1291288 + | chemotaxis response regulator protein-glutamate methylesterase CheB cheY 1291303 - 1291692 + | chemotaxis response regulator CheY TERM 1672 1291772 - 1291794 + G 74 -9.8 -3.53811 | overlap 1291760 GCGCGCATCGGCAGC CTGACGCGTA TGC TGCGCGACAG TTTGCGGGAGCTGGG cheZ 1291703 - 1292347 + | chemotaxis phosphatase CheZ EcSMS35_1304 1293187 - 1292435 - | hypothetical protein TERM 1673 1292548 - 1292572 + gT 82 -2.8 -5.18357 | opp_overlap 1292525 1292522 GGTAGTGCAGTACAT CGTAATGATG CCAAA CTTCATAACG TTTTTTCGTCAGTTC TERM 1674 1293110 - 1293083 - GT 70 -9.2 -3.19602 | opp_overlap 1293084, overlap 1293068 1293081 1293084 GGCCGGACAGGAACA GGCCAGAGTATC AAGT AATACTCTGGCT TTCTTATGCTCATCA TERM 1675 1293109 - 1293084 - GT 81 -12.7 -2.51547 | opp_overlap 1293084, overlap 1293068 1293083 1293081 GCCGGACAGGAACAG GCCAGAGTATC AAGT AATACTCTGGC TTTCTTATGCTCATC TERM 1676 1293084 - 1293109 + gT 95 -12 -4.36554 | opp_overlap 1293068 1293084 1293083 1293081 GCCGGACAGGAACAG GCCAGAGTAT CAAGTA ATACTCTGGC TTTCTTATGCTCATC EcSMS35_1305 1294664 - 1293156 - | putative deoxyguanosinetriphosphate triphosphohydrolase EcSMS35_1306 1294868 - 1294746 - | hypothetical protein TERM 1677 1294984 - 1294958 - g 71 -2.2 -4.9218 | overlap 1294959 CACCGACTAGAAAAA GCGCGGGA AGAGGGGCAAA TCCCGCGT TCCCGTGAACTGACC TERM 1678 1295570 - 1295554 - g 84 -7.9 -4.62783 | CAGCCACCTGAAAAA GCTGCGA ATG TCGCGGC AGGATATTCGTGATG TERM 1679 1295998 - 1296018 + G 72 -4.6 -4.63218 | ACAACCTACTCATCT TCCGGTGC CGGAA GCCCTGGA TTTTATTAACGAGAA flhB 1294901 - 1296049 + | flagellar biosynthetic protein FlhB TERM 1680 1296964 - 1296977 + G 74 -3.1 -4.88228 | GCCTGGTGCCTGGAA TGCCA AACC TGGTA TTTTTGCTGTTCACT flhA 1296042 - 1298120 + | flagellar biosynthesis protein FlhA flhE 1298120 - 1298512 + | flagellar protein FlhE TERM 1681 1298523 - 1298546 + T 100 -12.5 -4.16943 | opp_overlap 1298523 1298542 GTTAATGATAAAAAA GCCGATGTC TGCCAT GACATCGGC TTTTGCCGTATAACG TERM 1682 1298546 - 1298523 - T 100 -12.5 -5.37345 | opp_overlap 1298523, overlap 1298542 GTTAATGATAAAAAA GCCGATGTC TGCCAT GACATCGGC TTTTGCCGTATAACG argS 1300298 - 1298565 - | arginyl-tRNA synthetase TERM 1683 1300238 - 1300217 - G 70 -10.1 -3.18264 | TTGCTGACTGACGAA CCTGCGGTT CGCA ATCCGCAGG CGCGCCTGCCGCAAT TERM 1684 1300339 - 1300321 - H 78 -11 -3.20382 | CCTTACATTGATGAA GCGAGCAA AAT TTGCCCGC ACCAGTTAAAGAAAT TERM 1685 1300683 - 1300663 - g 95 -12.5 -4.25104 | opp_overlap 1300657 GCGTTGCCATCAAAA CGCCACCGC TGA GCGCTGGCG TCGCGGGTTTGAACA EcSMS35_1311 1300508 - 1301080 + | hypothetical protein TERM 1686 1301263 - 1301284 + G 70 -3.7 -4.72272 | gap 1, overlap 1301267 TCCCTGTGCATCCGA TTATCCGCCC ACG GGGTGG-TGA TTTTTGCTACAGCGA cutC 1301094 - 1301840 + | copper homeostasis protein CutC TERM 1687 1301888 - 1301912 + F 100 -10 -5.64274 | TGCTTGCTCGTACCA GGCCCCTG CAATTTCAA CAGGGGCC TTTTTTTATCCCTGA torY 1302228 - 1303328 + | trimethylamine N-oxide reductase III, c-type cytochrome subunit TorY torZ 1303353 - 1305782 + | trimethylamine N-oxide reductase III, subunit TorZ TERM 1688 1305788 - 1305815 + T 87 -11.2 -3.60792 | opp_overlap 1305793, overlap 1305793 TCAGGCATAAGACGT GAAAAGCGCCCG GAAA CGGGCGCTAATC TTTACGGCTTGCGCG TERM 1689 1305810 - 1305793 - T 100 -14.1 -4.20712 | opp_overlap 1305788 1305793 CATAAGACGTGAAAA GCGCCCG GAAA CGGGCGC TAATCTTTACGGCTT TERM 1690 1305793 - 1305810 + T 89 -14.1 -2.85069 | opp_overlap 1305793, overlap 1305788 CATAAGACGTGAAAA GCGCCCG GAAA CGGGCGC TAATCTTTACGGCTT EcSMS35_1315 1306788 - 1305817 - | putative methyltransferase EcSMS35_1316 1307528 - 1306785 - | putative methyltransferase EcSMS35_1317 1307964 - 1307569 - | putative inner membrane protein TERM 1691 1307881 - 1307858 - G 88 -11 -4.08767 | gap 1, opp_overlap 1307855 TGCAGTTCGCTAAAA CCGCCGTCGCC ATA GGCAACG-CGG TACTGCATTCGCAGG EcSMS35_1318 1308835 - 1308017 - | hypothetical protein TERM 1692 1308151 - 1308175 + g 72 -10 -3.31915 | opp_overlap 1308151 1308150, overlap 1308149 1308147 GTAAAAAAAGATAAG GCGTAGTGGT CTGAT GCCACTGCGC TAATTTTTGTAACCA TERM 1693 1308861 - 1308838 - R 77 -9.6 -3.61609 | CGATGTAAATCATAA TGCGTTGAGG ATCT CTTCAACGCA GCGCACACGGGCAAT EcSMS35_1319 1309398 - 1308832 - | isochorismatase family protein TERM 1694 1309362 - 1309376 + g 72 -7.1 -4.20354 | opp_overlap 1309360 1309359 1309362 CTTGTAAATCAATCA CCACC AGCGC GGTGG TTTTAGCATTAAGTT aspS 1309708 - 1311480 + | aspartyl-tRNA synthetase nudB 1311482 - 1311925 + | dATP pyrophosphohydrolase EcSMS35_1322 1311954 - 1312694 + | hypothetical protein TERM 1695 1313116 - 1313087 - g 86 -7.1 -5.02074 | opp_overlap 1313091 GTAGTGCCGAAAAAA GCCAGGTGCAG CATATGGT CCGCACCTTGC TGAAACTGCCTGCTA ruvC 1312729 - 1313250 + | crossover junction endodeoxyribonuclease RuvC TERM 1696 1313258 - 1313283 + T 78 -10.4 -3.61178 | opp_overlap 1313255 TGCGTTAAGTTATAC CGCCTCGGTC AGTTCA GGCTGAGGCG TTTCCACTCCCTCCG EcSMS35_1324 1313854 - 1313252 - | hypothetical protein TERM 1697 1313572 - 1313584 + g 85 -3.4 -5.35721 | GGGAGGGAACCTGTT CAAC AATTC GTTG TTTTTGTTGTTCTGT TERM 1698 1313897 - 1313907 + H 70 -2.6 -5.00616 | opp_overlap 1313897 ATATACGTAATAGCA TAAA AAA TTTA TTTTTTCAGGAGGCG TERM 1699 1314060 - 1314079 + H 100 -6.4 -5.67063 | overlap 1314061 GTTTTCTTCATCCTT CGCTGGAT ATCT ATCCAGCA TTTTTTTATCATACA TERM 1700 1314061 - 1314078 + H 81 -9.9 -3.99153 | overlap 1314060 TTTTCTTCATCCTTC GCTGGAT ATCT ATCCAGC ATTTTTTTATCATAC ruvA 1314129 - 1314740 + | Holliday junction DNA helicase RuvA ruvB 1314749 - 1315759 + | Holliday junction DNA helicase RuvB znuB 1316691 - 1315906 - | zinc uptake ABC transporter, permease protein ZnuB znuC 1317443 - 1316688 - | high-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC TERM 1701 1317926 - 1317913 - gH 77 -3.1 -5.03715 | overlap 1317914 1317923 ACCACGCGGAAAAAA GTGAC GAAG ATCAC CATCACGGCGATTTC znuA 1317396 - 1318454 + | zinc ABC transporter, periplasmic zinc-binding protein TERM 1702 1319091 - 1319075 - g 81 -10.1 -3.87815 | opp_overlap 1319062, overlap 1319089 TGCCAGCGCCAGAAA CGCCGGT TTA ACCAGCG CCGAAGTGAGCGCAG EcSMS35_1330 1318470 - 1319792 + | metalloprotease opacity-associated protein A family TERM 1703 1319809 - 1319831 + F 100 -10.6 -5.68438 | TAACATCCATTCGCA GCCGGTAC GCAGTCA GTACCGGC TTTTTTATTTGGTGC TERM 1704 1320400 - 1320412 + G 79 -4.7 -4.9755 | opp_overlap 1320400 GCGATGTTCCATAAT CAGGG CAA CCCGG TTTTTGATTATGTCT msbB 1319911 - 1320882 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1705 1320906 - 1320888 - T 100 -4.5 -5.99154 | overlap 1320889 CATCAAATAAAAAAA GCCTCTC GCGAG GATAGGC TTCCGCCGTGTGATA TERM 1706 1320968 - 1321013 + T 71 -9 -3.27994 | gap 2, opp_overlap 1320971, overlap 1320972 TGTTGAACTATCATT GAACTGTAGGCCGGATGAGGCG TTTT CGCCGCATCCGG-CAAC-GTAC TTACTCTACCGTTAA TERM 1707 1320972 - 1321010 + T 79 -11.7 -2.81725 | gap 1, opp_overlap 1320971, overlap 1320968 GAACTATCATTGAAC TGTAGGCCGGATGAGGCG TTTT CGCCGCATCCGG-CAACG TACTTACTCTACCGT pykA 1322456 - 1321014 - | pyruvate kinase II TERM 1708 1322118 - 1322129 + g 95 -5.8 -5.38054 | AGGCAGGCCTTTGTA GTCG ATAC CGAC TTTTTCTTTGTCGCC EcSMS35_1333 1323453 - 1322584 - | RpiR family transcriptional regulator TERM 1709 1323419 - 1323434 + g 81 -4.7 -5.02476 | overlap 1323429 GATTTGCTCAAATGT TCCAG CTGAGA CTGGA TTTTTTCCAGCATAT EcSMS35_1334 1323476 - 1323625 + | hypothetical protein TERM 1710 1323831 - 1323865 + G 89 -13.6 -3.22388 | overlap 1323835 CCTGTGACCTGGTCA TTTTCGGCGCGAAAGG CGA CCTTGCGCGTCGTAAA TTGCTGCCTTCCCTG TERM 1711 1323835 - 1323861 + G 90 -14.4 -2.57721 | overlap 1323831 TGACCTGGTCATTTT CGGCGCGAAAGG CGA CCTTGCGCGTCG TAAATTGCTGCCTTC zwf 1323791 - 1325266 + | glucose-6-phosphate 1-dehydrogenase TERM 1712 1325346 - 1325371 + F 100 -11.2 -5.80364 | gap 1 TTTTTACACTTTCAG GCCTCGTGCGG ATTCA CC-CACGAGGC TTTTTTTATTACACT TERM 1713 1326821 - 1326801 - g 76 -7.5 -4.25104 | overlap 1326802 GTGCGGTTATGAAAA CCTCTGCCG TGC CGGTAGAGA ACCAGGTGATTGAAG TERM 1714 1327288 - 1327271 - g 82 -7.7 -4.56597 | GCCTTGCGTGAAAAA CTGTCCG GTGC CGAACAG GGCGCAACCTGTATC edd 1325501 - 1327312 + | phosphogluconate dehydratase TERM 1715 1327394 - 1327406 + G 71 -9.1 -3.44051 | opp_overlap 1327381 1327380, overlap 1327381 ATCCTGACCACCGGC CCGGT TGT ACCGG TTATCGTGGTAAAAA eda 1327349 - 1327990 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 1716 1328000 - 1328020 + T 100 -15.5 -4.86033 | opp_overlap 1328000 CTGTAAAAGTCAAAA TGCCCGATC AAG GATCGGGCA TTTTTGTAGCGGTTT TERM 1717 1328020 - 1328000 - T 100 -15.5 -4.4267 | opp_overlap 1328000 CTGTAAAAGTCAAAA TGCCCGATC AAG GATCGGGCA TTTTTGTAGCGGTTT purT 1329224 - 1328046 - | phosphoribosylglycinamide formyltransferase 2 EcSMS35_1339 1329358 - 1329648 + | YebG protein TERM 1718 1329888 - 1329876 - g 75 -4.7 -4.73613 | overlap 1329877 TGATTACCAACAAAA TCGCG TGG CGCGC TGGGCTGATGATCAA EcSMS35_1340 1329703 - 1330071 + | putative lipoprotein TERM 1719 1330641 - 1330629 - g 74 -3.3 -4.88684 | overlap 1330631 AATACAAAGATAAAA TTCGC GCG GCGCA TCAGGACGAACCGCA EcSMS35_1341 1330388 - 1331047 + | hypothetical protein TERM 1720 1331098 - 1331048 - f 78 -10.5 -3.61517 | ACTTTGGCGGAATAA TTCCGCTCTGGATAGCCTGAAGT TGACG ATTTCGGGCTATCCAGAACCGCA CGGCCATTTGAGCAG TERM 1721 1332020 - 1332036 + G 71 -2.2 -4.96501 | gap 1, overlap 1332021 TGCTGGACGCGGAAT TGGC-CG ATGC CGAGCCG TTTGTTTTTCTGCCG prtB 1331254 - 1333314 + | oligopeptidase B exoX 1333973 - 1333311 - | exodeoxyribonuclease X TERM 1722 1333934 - 1333948 + g 70 -7.1 -4.1399 | overlap 1333938 TCTCAACGATCCCTC CCTGC AAACC GCAGG TTTCTGTATCGATAA EcSMS35_1344 1334653 - 1333997 - | carbon-nitrogen family hydrolase holE 1334985 - 1334755 - | DNA polymerase III, theta subunit EcSMS35_1346 1335124 - 1335498 + | copper resistance protein CopC TERM 1723 1335521 - 1335531 + G 70 -6.8 -4.02132 | TGGCGTTTACCTGGA TCGC GCT GCGA TTTATCCATTTCACC TERM 1724 1335602 - 1335626 + G 74 -6.4 -4.51196 | opp_overlap 1335605 GGCTGGCCCCCTTAA CGATTCGTCG CTTGC TGACGAAGCG TTTTCTGCGTTTACA EcSMS35_1347 1335502 - 1336374 + | copper resistance protein D EcSMS35_1348 1336387 - 1336728 + | hypothetical protein TERM 1725 1336794 - 1336765 - f 100 -5.1 -5.7946 | gap 2, opp_overlap 1336765 TTTCCAATAAAAAAA CCGCCTCAGTTCT TTCACC AGAAC-G-GGCGG TTTTTAACATTTAAG TERM 1726 1336765 - 1336794 + F 73 -5.1 -4.70879 | gap 2, opp_overlap 1336765 TTTCCAATAAAAAAA CCGCCTCAGTTCT TTCACC AGAAC-G-GGCGG TTTTTAACATTTAAG TERM 1727 1336955 - 1336984 + F 79 -5.1 -5.10064 | gap 1, overlap 1336956 AAGAGCCATTTCCCT G-GACCGAATAC AGGAATC GTGTTCGGTCTC TTTTTATCTGTTAAA TERM 1728 1336956 - 1336982 + F 80 -8.8 -4.16832 | overlap 1336955 AGAGCCATTTCCCTG GACCGAATAC AGGAATC GTGTTCGGTC TCTTTTTATCTGTTA pphA 1337124 - 1337780 + | serine/threonine-protein phosphatase 1 EcSMS35_1350 1337972 - 1337781 - | hypothetical protein TERM 1729 1337859 - 1337848 - G 72 -7.2 -4.21933 | opp_overlap 1337847 TCAATCGGAAAACAA CCGC CATG GCGG ATCCGTTGATCGCTC TERM 1730 1338065 - 1338049 - R 74 -7.9 -4.12857 | opp_overlap 1338046 1338049 AACCAGGACAAATAA CCCGCCA TGC CGACGGG TTCTTTTTGGATCAG TERM 1731 1338049 - 1338065 + r 71 -5 -4.44608 | opp_overlap 1338049, overlap 1338046 AACCAGGACAAATAA CCCGCC ATGCC GACGGG TTCTTTTTGGATCAG EcSMS35_1351 1338313 - 1338077 - | hypothetical protein TERM 1732 1338248 - 1338260 + g 71 -10.5 -2.90723 | TAACGTTCGATCACC CGGCG ATT CGCCG TGTAATTCGCCGTCG TERM 1733 1338299 - 1338288 - G 70 -7.2 -4.13767 | TCGTCGATTTCAAAA GCGC CTAT GCGC ACACTGGTTTTCATC rsmF 1339876 - 1338431 - | ribosomal RNA small subunit methyltransferase F TERM 1734 1339225 - 1339235 + g 86 -6.8 -5.02074 | TTTCCTGATTGCTTT CTGG TGA CCAG TTTTTTAGCGCATCG TERM 1735 1339942 - 1339917 - R 100 -14.7 -3.9712 | opp_overlap 1339910, overlap 1339918 GCAGTTTAGCATAAA CGCTCCGGCGC AGAC ACGCCGGAGCA GTGGGCATTATTTGG TERM 1736 1339941 - 1339918 - R 100 -16 -2.97951 | opp_overlap 1339910, overlap 1339917 CAGTTTAGCATAAAC GCTCCGGCGC AGAC ACGCCGGAGC AGTGGGCATTATTTG EcSMS35_1353 1342589 - 1339950 - | mce-related protein EcSMS35_1354 1343790 - 1342552 - | PqiA family integral membrane protein TERM 1737 1342750 - 1342732 - GH 78 -8.8 -4.08111 | overlap 1342734 TAAAGATATGACAAA CAGGTCGA GCA TCGACCAG CGACCAATCCAGGTC TERM 1738 1342748 - 1342734 - GH 78 -10 -3.61777 | overlap 1342732 AAGATATGACAAACA GGTCGA GCA TCGACC AGCGACCAATCCAGG TERM 1739 1343596 - 1343574 - GH 72 -9.8 -3.14125 | overlap 1343572 GCCAGATATGCAACA GCGGTTCGCC CCA GGCAAACGGC ATCAACAACAGCATA TERM 1740 1343893 - 1343917 + H 72 -6.6 -4.26903 | opp_overlap 1343904 TGATGGGAATGATCT TGAGCATTAA CGCAT TTAATGCTTA TTTTAATAGGCTGGC EcSMS35_1355 1343911 - 1344462 + | GAF domain-containing protein TERM 1741 1344967 - 1344955 - g 70 -6.9 -4.06419 | overlap 1344958 GCTGGTGAGAAAGAA GACGC ACC GCGCC GCGAACGCAAGCCAC proQ 1344559 - 1345257 + | ProP effector TERM 1742 1345702 - 1345684 - g 74 -8.1 -4.13767 | GTCGGTACTGGAAAA GCCGATG GATTT CACCGGC AACGACACTTATAAC TERM 1743 1346853 - 1346843 - g 72 -8.2 -3.77219 | AGTACGCAACGTAAA GGCG TAA CGCC AGACATCATCATGCC prc 1345283 - 1347325 + | C-terminal processing peptidase TERM 1744 1347332 - 1347355 + F 100 -14 -5.00616 | opp_overlap 1347332 GTCAAGTAACATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1745 1347355 - 1347332 - f 100 -14 -3.42147 | opp_overlap 1347332 GTCAAGTAACATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC TERM 1746 1347477 - 1347487 + F 79 -6.8 -4.65916 | opp_overlap 1347463, overlap 1347453 1347452 1347465 ATACGATGTGGGTAT CGCA TAT TGCG TTTTGTTAAACTGAG EcSMS35_1358 1347517 - 1348398 + | M48B family peptidase TERM 1747 1348444 - 1348413 - T 79 -11.7 -2.74026 | opp_overlap 1348419, overlap 1348419 ATATGAAGTAAATAC TAAAAAGCGCGTC CTGATC GACGCGCTTTTTT TATGCCATGGATCGT TERM 1748 1348438 - 1348419 - T 100 -10.7 -4.946 | opp_overlap 1348419, overlap 1348413 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCATG TERM 1749 1348419 - 1348438 + T 100 -10.7 -5.626 | opp_overlap 1348419 1348413 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCATG EcSMS35_1359 1349817 - 1348444 - | major facilitator transporter kdgR 1349994 - 1350785 + | transcriptional regulator KdgR TERM 1750 1350795 - 1350825 + T 93 -11.3 -4.44046 | opp_overlap 1350795 1350798 TTCTGATGAGAGTAA GAACCTGTCTG AATATCAAA CAGACAGGTTC TTTATTTAGCATGAG TERM 1751 1350825 - 1350795 - T 83 -11.3 -3.29471 | opp_overlap 1350795, overlap 1350798 TTCTGATGAGAGTAA GAACCTGTCTG AATATCAAA CAGACAGGTTC TTTATTTAGCATGAG EcSMS35_1361 1351168 - 1350929 - | hypothetical protein EcSMS35_1362 1351327 - 1351470 + | putative lipoprotein EcSMS35_1363 1351545 - 1351832 + | hypothetical protein TERM 1752 1351846 - 1351877 + F 72 -9.6 -3.25729 | gap 1, opp_overlap 1351854 AATCCTTCCTCAATC TTGAGTAACCCCGTC GTT GAAGG-GTTACTCAA TTCATCCTGATTATA EcSMS35_1364 1352502 - 1352645 + | hypothetical protein cspC 1352658 - 1352867 + | cold shock protein CspC TERM 1753 1352844 - 1352860 + F 70 -9.5 -2.94747 | opp_overlap 1352835 CAGAAAGGTCCGGCA GCTGTTA ACG TAACAGC TATCTGATCGAATCC TERM 1754 1352910 - 1352940 + F 83 -12.7 -3.11709 | opp_overlap 1352916, overlap 1352916 ACGCTTCAATCTCGC TATAAAGCCTCGC CGAAT GCGAGGCTTTTTA CTTTGCTTTATCTTC TERM 1755 1352934 - 1352916 - f 93 -11.7 -3.86822 | opp_overlap 1352910 1352916 CAATCTCGCTATAAA GCCTCGC CGAAT GCGAGGC TTTTTACTTTGCTTT TERM 1756 1352916 - 1352934 + F 100 -11.7 -5.05577 | opp_overlap 1352916, overlap 1352910 CAATCTCGCTATAAA GCCTCGC CGAAT GCGAGGC TTTTTACTTTGCTTT rrmA 1353033 - 1353842 + | ribosomal RNA large subunit methyltransferase A EcSMS35_1366 1354405 - 1353839 - | hypothetical protein TERM 1757 1354823 - 1354772 - R 72 -9.8 -3.1577 | gap 1, opp_overlap 1354770 1354774, overlap 1354770 1354812 AGGGAAGAGGTAATA TAGCCTAAGCTATGTCTGAT-TATT AAA AATACACTAAACATAGCTTTGGCTA AATTCATAACCTATT EcSMS35_1368 1355292 - 1354834 - | hypothetical protein TERM 1758 1355312 - 1355331 + r 74 -10.6 -2.62396 | opp_overlap 1355313 CCTCCAGATAAAAAA ACGGGGCC AAAA GGCCCCGG TAGTGTACAACAGTC TERM 1759 1355330 - 1355313 - R 100 -14.1 -5.71712 | opp_overlap 1355312 CTCCAGATAAAAAAA CGGGGCC AAAA GGCCCCG GTAGTGTACAACAGT manZ 1356198 - 1355347 - | PTS system, mannose-specific IID component TERM 1760 1356148 - 1356162 + g 82 -2.8 -5.28778 | opp_overlap 1356149, overlap 1356149 GAAGACGCCACGAAT ATCACT TTG AGTGAG TTTTTTCTCGGTGGT manY 1357011 - 1356211 - | PTS system, mannose-specific IIC component manX 1358045 - 1357074 - | PTS system, mannose-specific IIAB component TERM 1761 1357612 - 1357637 + g 100 -12.5 -4.58685 | GGAGCCGCTTTTGGT GCTGCGGCAGC GGGT GCTGGCGCGGC TTTTTCAACCGGTTT TERM 1762 1358995 - 1359038 + G 72 -6.6 -4.15222 | opp_overlap 1359027 TGGCGGCGGTAGTGA TTGCGATGGCGGTTATGCTG CTGG CATCGAAACCGCTGACGCGA TTTGTTAACCAGCAT TERM 1763 1359208 - 1359196 - g 72 -7.7 -3.90856 | opp_overlap 1359196 1359195 AAGTGTTTAACCAAA TTGCG CGT CGCAA CTTTATTCGTCACCA TERM 1764 1359678 - 1359689 + G 72 -5.8 -4.35483 | GGCGTACTGCGTCGT GCTC GCGG GAGC TTTGTTATCGTGACC EcSMS35_1372 1358508 - 1360064 + | TerC family/CBS/transporter associated domain-containing protein TERM 1765 1360109 - 1360077 - T 81 -11.3 -3.18199 | opp_overlap 1360086 1360105 TAAGTGTTAACGTAA CGGCATAACGGGCGT GAT ATGTCCATTATGCCG GGCGGGCGGCGGTTG EcSMS35_1373 1361666 - 1360068 - | cyclic diguanylate phosphodiesterase domain-containing protein TERM 1766 1360105 - 1360139 + g 100 -14.9 -3.54424 | opp_overlap 1360077 GTGATATGTCCATTA TGCCGGGCGGGCGGC GGTTG GCTGCCCGCCAGCCA TTTGGGAAAATCACG TERM 1767 1361787 - 1361761 - R 100 -13 -3.88583 | overlap 1361762 GAAAGCGGGGATAAA TTCGCCCATCCG TTG CAGATGGGCGAG TAAGAAGTATTAGTC TERM 1768 1361786 - 1361762 - R 100 -16.5 -2.92668 | overlap 1361761 AAAGCGGGGATAAAT TCGCCCATCCG TTG CAGATGGGCGA GTAAGAAGTATTAGT sdaA 1363161 - 1361797 - | L-serine ammonia-lyase 1 EcSMS35_1375 1363923 - 1363345 - | NUDIX family hydrolase pabB 1365288 - 1363927 - | aminodeoxychorismate synthase TERM 1769 1364574 - 1364561 - G 83 -5.2 -5.055 | TCAAGGCGTAAAAAA GCGC TAAACG GCGC GCGGTTGGCCTGATT TERM 1770 1365182 - 1365154 - G 72 -8.1 -3.98159 | overlap 1365155 GACCACAATATCAAA GCGGCTATACGGA TGA TCGGCATAGCCGG AGTGTAAAAGCATCG TERM 1771 1365181 - 1365155 - G 75 -11.6 -2.98173 | overlap 1365154 ACCACAATATCAAAG CGGCTATACGGA TGA TCGGCATAGCCG GAGTGTAAAAGCATC EcSMS35_1377 1365362 - 1365541 + | hypothetical protein TERM 1772 1365631 - 1365601 - T 100 -11.3 -4.84359 | TGATTGTGAGAAAAA GGACGCTTTTCAT ATGTG ATTAAAAGCGTCC TGACCCATTTATGCT EcSMS35_1378 1365960 - 1365661 - | hypothetical protein TERM 1773 1366310 - 1366336 + r 72 -9.5 -3.25668 | opp_overlap 1366307, overlap 1366309 GTAATAACTTAATCT CTGGTCGATTT ATGCA AAACCGACCAG TATTATCGATAAATT EcSMS35_1379 1366726 - 1366382 - | endoribonuclease L-PSP family protein TERM 1774 1368246 - 1368257 + G 72 -4.4 -4.64846 | opp_overlap 1368246 GATCATCGAAGCTAA CAAC GGTC GTTG TTTTATGCTTTGTAC EcSMS35_1380 1366858 - 1368768 + | hypothetical protein EcSMS35_1381 1368826 - 1369521 + | glycoprotease family protein slp 1369560 - 1370141 + | outer membrane protein Slp TERM 1775 1370187 - 1370163 - f 100 -14.4 -5.27335 | opp_overlap 1370163 1370167, overlap 1370143 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCTTACGGTA TERM 1776 1370163 - 1370187 + F 87 -14.4 -2.66106 | opp_overlap 1370143 1370163, overlap 1370167 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCTTACGGTA TERM 1777 1370167 - 1370183 + F 81 -9.4 -4.02253 | opp_overlap 1370143 1370163, overlap 1370163 TTAAAGAAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTCTTAC TERM 1778 1371301 - 1371313 + G 72 -7.7 -3.91144 | opp_overlap 1371300 1371297, overlap 1371304 1371305 TGAACAATAAAGAGT TCCAG CAG CTGGA TTTCTCCAGTCTGCA TERM 1779 1371878 - 1371889 + G 70 -4.4 -4.57569 | opp_overlap 1371878 ATCGCTTACCGAAGA GTCA CTGG TGAC TTTTTGCCGCCGTCA fadD 1370346 - 1372031 + | long-chain-fatty-acid--CoA ligase TERM 1780 1372052 - 1372068 + F 100 -10.8 -5.75342 | opp_overlap 1372043, overlap 1372041 AAGTCAGTCGTCAGA CGCCGG TTAAT CCGGCG TTTTTTTTGACGCCC rnd 1372101 - 1373228 + | ribonuclease D TERM 1781 1373274 - 1373231 - T 100 -24.8 -4.26344 | ATATCCGCAGTAAAA TCTTCCGAAGCCGGACTGAG CGCG CTCAGTCCGGCTTCGGCAAA CTACAAATCCAACAC EcSMS35_1385 1374240 - 1373275 - | oxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein TERM 1782 1373996 - 1373986 - G 88 -8.2 -4.65895 | opp_overlap 1373993 1373993 CTGCTGATGCAAAAA GCGG GAA CCGC CGCGCGAGTTTTCCT TERM 1783 1374295 - 1374260 - R 73 -5.3 -4.7373 | opp_overlap 1374260 1374265 1374268 1374287, overlap 1374263 1374264 GTACTCCATCAAAAA TCAGCCCAGCGGCGG AAAATA CCGCCGCTGATGTCA TTAGTCCTTAAACAC TERM 1784 1374291 - 1374264 - R 70 -10.5 -2.56601 | opp_overlap 1374260 1374265 1374268 1374287, overlap 1374263 1374260 TCCATCAAAAATCAG CCCAGCGGCGG AAAATA CCGCCGCTGAT GTCATTAGTCCTTAA TERM 1785 1374265 - 1374290 + r 80 -11.8 -2.95409 | opp_overlap 1374264 1374263 1374260, overlap 1374260 1374268 1374287 CCATCAAAAATCAGC CCAGCGGCGG AAAATA CCGCCGCTGA TGTCATTAGTCCTTA TERM 1786 1374268 - 1374287 + r 79 -12.1 -2.70936 | opp_overlap 1374264 1374263 1374260, overlap 1374265 1374260 TCAAAAATCAGCCCA GCGGCGG AAAATA CCGCCGC TGATGTCATTAGTCC EcSMS35_1386 1375420 - 1374296 - | Rieske (2Fe-2S) domain-containing protein EcSMS35_1387 1377062 - 1375452 - | BCCT family transporter TERM 1787 1376947 - 1376963 + g 79 -10.1 -3.78934 | AAAGTGTATATAGCG TTGGCCG CGT CGGCCGA TTGTTGTGGGAAAAG TERM 1788 1377291 - 1377275 - R 100 -13.7 -5.87996 | overlap 1377237 GAACGAATAAAAAAA CCGCGTC AGT GACGCGG TTCAAATAAACTGGT ttuC 1378398 - 1377313 - | tartrate dehydrogenase/decarboxylase TERM 1789 1377966 - 1377994 + g 76 -8.1 -4.18018 | CTTCATTCACTCTAC CGCCGAGCGAGGA ATA TTCTCCTTCGGTG TTTTCCCTGACCACG EcSMS35_1389 1378501 - 1379424 + | LysR family transcriptional regulator TERM 1790 1379451 - 1379466 + F 74 -5.4 -4.64846 | ATTATCGCGTTGATA TCGGGT TAAA ACCTGA TTTTCTCCTTTCTAA TERM 1791 1379591 - 1379602 + G 79 -2.2 -5.29716 | ATTACTGGACCTATC TGGT TGGG GCCA TTTTTATTGTGTTGG EcSMS35_1390 1379551 - 1380189 + | putative homoserine/threonine efflux protein EcSMS35_1391 1380391 - 1380257 - | hypothetical protein EcSMS35_1392 1380362 - 1380721 + | hypothetical protein EcSMS35_1393 1380725 - 1380907 + | hypothetical protein EcSMS35_1394 1380924 - 1381043 + | hypothetical protein EcSMS35_1395 1381055 - 1381303 + | hypothetical protein TERM 1792 1381315 - 1381345 + T 71 -4.8 -4.45083 | gap 1, opp_overlap 1381321, overlap 1381316 1381317 1381321 TTAACGCGTAAATTG CA-CAAAGGCTGC ACACAG GCAGCCTTTGCTA TTTTCTAGATGTGAC TERM 1793 1381316 - 1381343 + T 79 -9.9 -3.83188 | opp_overlap 1381321, overlap 1381315 1381317 1381321 TAACGCGTAAATTGC ACAAAGGCTGC ACACAG GCAGCCTTTGC TATTTTCTAGATGTG TERM 1794 1381317 - 1381342 + T 86 -13.4 -2.8919 | opp_overlap 1381321, overlap 1381316 1381315 1381321 AACGCGTAAATTGCA CAAAGGCTGC ACACAG GCAGCCTTTG CTATTTTCTAGATGT TERM 1795 1381321 - 1381338 + T 78 -8.4 -4.10958 | opp_overlap 1381321, overlap 1381317 1381316 1381315 CGTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTCTAG TERM 1796 1381338 - 1381321 - T 76 -8.4 -3.95219 | opp_overlap 1381317 1381316 1381315 1381321 CGTAAATTGCACAAA GGCTGC ACACAG GCAGCC TTTGCTATTTTCTAG EcSMS35_1396 1381552 - 1381439 - | hypothetical protein EcSMS35_1397 1382595 - 1381570 - | GAF domain/diguanylate cyclase domain-containing protein EcSMS35_1398 1382778 - 1383032 + | putative lipoprotein EcSMS35_1399 1383401 - 1383054 - | hypothetical protein TERM 1797 1383081 - 1383105 + g 86 -6.5 -5.1675 | gap 1 TAGCCAGTCGGCCAG CACCAGCGCA TGGTTC TGCG-TGGTG TTTTTTGCTGAGTAG yeaN 1384637 - 1383456 - | inner membrane transport protein yeaN TERM 1798 1385493 - 1385472 - g 93 -11.5 -4.1711 | opp_overlap 1385470, overlap 1385447 1385446 ACTATGTTTAAGAAA GGCCTGGGG CAAA CGCCAGGCC GATATATTGCGGGAT EcSMS35_1402 1384746 - 1385555 + | AraC family transcriptional regulator EcSMS35_1401 1385958 - 1385512 - | hypothetical protein EcSMS35_1403 1386080 - 1386232 + | hypothetical protein EcSMS35_1404 1386736 - 1386233 - | YbaK/prolyl-tRNA synthetase-associated domain-containing protein TERM 1799 1386625 - 1386600 - G 78 -10.5 -3.53012 | gap 1, opp_overlap 1386595 GCCCCCTGGCCTAAA GCGGTGCCACGA ATT TC-TGACACCGC TTCACATTTACCTAC EcSMS35_1405 1388269 - 1386779 - | diguanylate cyclase TERM 1800 1388432 - 1388414 - R 76 -8.1 -4.20106 | AAATTGTATGCAAAA GCCACGC AAAAA GCATGGC TCTGAATATTTTTGC EcSMS35_1406 1389784 - 1388450 - | diguanylate cyclase TERM 1801 1388486 - 1388506 + g 74 -7.5 -4.13872 | TTTGTTGCCCCCCTC GCTTTTCGC TTC GCGTAAGGC TTTATCTGCTTCCGT TERM 1802 1390066 - 1390040 - R 91 -9.4 -4.67755 | ACAGTGAGCTAAAAA TCAGCCAGGCGA TAA TGACCCGGCTGA CAGTTTTAGTCTTTA EcSMS35_1407 1391355 - 1390072 - | hypothetical protein TERM 1803 1390897 - 1390907 + g 81 -6.8 -4.68724 | opp_overlap 1390896 GTTAGCGGTATAACC CGCA CGA TGCG TTTTATATTCGGTCA EcSMS35_1408 1393402 - 1391468 - | serine kinase family protein TERM 1804 1391578 - 1391589 + g 70 -5.8 -4.19238 | CATGTTTCTTCTGCT CGTC GGTT GACG TTTTGGCGTTAAACG TERM 1805 1392439 - 1392452 + g 72 -4.5 -4.72127 | CGATGTAAACACGGT CGAGG AAGG CTTCG TTGTTTTTGTTATTA mipA 1393838 - 1394584 + | MltA-interacting protein MipA TERM 1806 1394620 - 1394636 + F 85 -10.1 -4.2803 | opp_overlap 1394620 TTTTGTGCATAAAAA CAGGGCG TCA TGCCCTG TTTTGCATTACGGTG TERM 1807 1394636 - 1394620 - f 91 -9.4 -4.82901 | opp_overlap 1394620 TTTTGTGCATAAAAA CAGGGC GTCAT GCCCTG TTTTGCATTACGGTG EcSMS35_1410 1394674 - 1395528 + | aldo/keto reductase family oxidoreductase EcSMS35_1411 1396463 - 1395579 - | aldose 1-epimerase family protein TERM 1808 1396520 - 1396503 - R 100 -11.3 -5.82316 | opp_overlap 1396503 ATCAGGTAAAAAAAA GAGCGAC CGAA GTCGCTC TTTTTAGATCACAGT TERM 1809 1396503 - 1396520 + r 100 -11.3 -4.66163 | opp_overlap 1396503 ATCAGGTAAAAAAAA GAGCGAC CGAA GTCGCTC TTTTTAGATCACAGT gapA 1397542 - 1396547 - | giyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TERM 1810 1397614 - 1397598 - H 73 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT msrB 1397884 - 1398297 + | methionine-R-sulfoxide reductase EcSMS35_1414 1398339 - 1398611 + | hypothetical protein TERM 1811 1398861 - 1398886 + F 77 -9.1 -3.76289 | opp_overlap 1398878, overlap 1398869 1398870 1398878 TTTTCTGCGTAATTG TGATCTGAGTT GTAA AACGCAGATCA TTATCTGTGTTTTAC TERM 1812 1398869 - 1398904 + F 79 -9.2 -3.93038 | opp_overlap 1398878, overlap 1398861 1398870 1398878 GTAATTGTGATCTGA GTTGTAAAACGCAGAT CATT ATCTGTGTTTTACAGA TTTAATGTTGACCTC TERM 1813 1398870 - 1398903 + F 82 -12.7 -2.95341 | opp_overlap 1398878, overlap 1398861 1398869 1398878 TAATTGTGATCTGAG TTGTAAAACGCAGAT CATT ATCTGTGTTTTACAG ATTTAATGTTGACCT TERM 1814 1398878 - 1398895 + F 70 -6.3 -4.17491 | opp_overlap 1398878, overlap 1398861 1398870 1398869 ATCTGAGTTGTAAAA CGCAGAT CATT ATCTGTG TTTTACAGATTTAAT TERM 1815 1399100 - 1399083 - g 77 -8.3 -4.08485 | GTGATTGAAATTAAA GCCGCGG CAAT CTGCGGC GCAGACATGAAGCAC EcSMS35_1415 1398981 - 1400057 + | zinc-binding dehydrogenase family oxidoreductase TERM 1816 1400112 - 1400102 - g 71 -2.4 -4.90002 | GAACAGATAACAAAA CCGC ATT GTGG TGCTCGGCTGGATCG TERM 1817 1400777 - 1400765 - g 78 -9.1 -3.9093 | CGGAGTATAGAAGAA GGCGT CAT ACGCC AGACGGGAAAACCTT ydjK 1400084 - 1401463 + | major facilitator family transporter gutB 1401480 - 1402523 + | sorbitol dehydrogenase EcSMS35_1418 1402544 - 1403380 + | fructose-bisphosphate aldolase EcSMS35_1419 1403385 - 1404332 + | PfkB family kinase TERM 1818 1404578 - 1404564 - g 86 -4.2 -5.41143 | CAGGCGTTAAAAAAA CTGCCC CGT GAACAG GTTGTAGTAGAAACC TERM 1819 1404693 - 1404665 - g 78 -5.2 -4.84359 | GCAGTTGTATAAAAA CCTTTCCCCGGA ATCTA TCCGCGAAGAGG TAGAAGCCAGCTTGC TERM 1820 1404750 - 1404767 + G 74 -3.3 -5.0133 | ATCTACATGACGCAC TGGCAGT CGGT GCCGCCA TTTTTTACGCCGATA EcSMS35_1420 1404342 - 1405322 + | aldo/keto reductase family oxidoreductase EcSMS35_1421 1405459 - 1406217 + | DeoR family transcriptional regulator TERM 1821 1406300 - 1406279 - f 78 -10.2 -3.60538 | opp_overlap 1406278 1406279, overlap 1406277 AAATGATGATAAAGA TGCGGCAA GTGAAT TTGCCGCA ATTGCTACCTTTTTA TERM 1822 1406279 - 1406300 + F 74 -10.9 -2.57261 | opp_overlap 1406279 1406277, overlap 1406278 AAATGATGATAAAGA TGCGGCAAG TGAA TTTGCCGCA ATTGCTACCTTTTTA TERM 1823 1406423 - 1406437 + G 82 -2.8 -5.2166 | overlap 1406424 TATTATAAGCTTTAG TCTGTT ATT AACGGG TTTTTTGAGTTATTC TERM 1824 1406557 - 1406578 + G 72 -7.3 -4.17048 | ATTTCATCGGCTCTC TTACCGGTG GGTT CATCGGTGA TTATTTTGGGCGGCG TERM 1825 1406631 - 1406647 + G 74 -6.5 -4.44245 | overlap 1406637 1406640 CTCATCGTCGGTATT GCGGC AACAGGG GCCGC TTTTGTCCCTGATAT TERM 1826 1406823 - 1406845 + G 100 -4.8 -5.63103 | CCCATGCTGTCTGCG GCGATAGGCG TGG TGGTTATCGC TTTTTTTAGTTGGCG ydjE 1406334 - 1407692 + | major facilitator family transporter TERM 1827 1407737 - 1407784 + T 74 -10.2 -3.23984 | gap 1 TGTACCACTGACGTG TTTTAT-CTGGCCTACAATGC CAGTACA GAATTGTAGGCCAGCGTAAAA TTACTCCTGCGTTTC pncA 1408426 - 1407785 - | pyrazinamidase/nicotinamidase ansA 1409453 - 1408437 - | L-asparaginase 1 TERM 1828 1408674 - 1408700 + g 85 -6.6 -4.77173 | overlap 1408676 AATTCCGCGATCGCT GGCTTCTTGTAA TTC TTGCAGGAAGGC TTTGTTTTGTGGCGC TERM 1829 1409611 - 1409580 - R 85 -8.1 -4.65895 | gap 1, opp_overlap 1409585, overlap 1409581 1409584 1409585 TCGTCGACGTAAAAA GTAATGTGGCCGAC GATCT GTCGGCCAC-TTAG TACATGACTTAACGC TERM 1830 1409610 - 1409581 - R 83 -11.6 -3.39216 | gap 1, opp_overlap 1409585, overlap 1409580 1409584 1409585 CGTCGACGTAAAAAG TAATGTGGCCGAC GATCT GTCGGCCAC-TTA GTACATGACTTAACG TERM 1831 1409608 - 1409584 - R 91 -11.4 -3.83042 | opp_overlap 1409585, overlap 1409581 1409580 1409585 CGACGTAAAAAGTAA TGTGGCCGAC GATCT GTCGGCCACT TAGTACATGACTTAA TERM 1832 1409607 - 1409585 - R 89 -14.9 -2.89102 | opp_overlap 1409585, overlap 1409584 1409581 1409580 GACGTAAAAAGTAAT GTGGCCGAC GATCT GTCGGCCAC TTAGTACATGACTTA TERM 1833 1409585 - 1409607 + r 100 -15.6 -3.19389 | opp_overlap 1409585 1409584 1409581 1409580 GACGTAAAAAGTAAT GTGGCCGACG ATC TGTCGGCCAC TTAGTACATGACTTA sppA 1411488 - 1409620 - | protease 4 TERM 1834 1411466 - 1411447 - G 77 -2.8 -5.08824 | overlap 1411449 CGTCCATTTAAAAAA TCCGGCAA TAAA TCGCCAAA GGGTTCGCATGTATT TERM 1835 1411893 - 1411871 - g 72 -7.6 -3.93984 | AAAGCCATCGACAAA GCGCGTAATG CGC CGTTCCGCGC ACCGCTCATCATAAC EcSMS35_1426 1411637 - 1412188 + | nitroreductase family protein selD 1412305 - 1413348 + | selenide, water dikinase TERM 1836 1413776 - 1413727 - g 88 -10.7 -4.13945 | gap 1, opp_overlap 1413733 1413774, overlap 1413728 ACTGGCACCGGAAAA GCGCCAGCAGGTACAGCGTTGTTT GAT AAACGAC-CTGAACCCGCAGGCGG TTGAGCGGGCGATCG TERM 1837 1413775 - 1413728 - g 87 -14.2 -3.08046 | gap 1, opp_overlap 1413733 1413774, overlap 1413727 CTGGCACCGGAAAAG CGCCAGCAGGTACAGCGTTGTTT GAT AAACGAC-CTGAACCCGCAGGCG GTTGAGCGGGCGATC TERM 1838 1414496 - 1414483 - g 74 -3.1 -4.91109 | gap 1 TTGGGATGACAAAAA GGT-CG ATG CGCACC ACGCCATCATTCCGA TERM 1839 1415290 - 1415268 - g 91 -5.5 -5.41143 | gap 1 GAGCGCCGAAAAAAA GCCCGTCATC AGAA GAGG-CGGGC AATGGAGTGATAATA topB 1413353 - 1415308 + | DNA topoisomerase III TERM 1840 1415344 - 1415378 + T 77 -11.5 -2.81072 | gap 1, overlap 1415343 1415355 TACTGAAGATTTTTA TG-GCCGGATAAGGCG TTTG CGCTGTATCCGGCACA ATTGTCTTAAATCAC gdhA 1416728 - 1415385 - | NADP-specific glutamate dehydrogenase TERM 1841 1416653 - 1416681 + g 70 -6.7 -4.12902 | gap 1 CTTCACGAACGGCTT GCGCGAACTCGG TTTGAT TCGGGT-CGCGC TTTTGGACATGGTTG TERM 1842 1417088 - 1417111 + G 93 -12.4 -3.87815 | overlap 1417078 CAGGCGGGCAGTCAG CGCAGCCCTG TACT CAGTGCTGCG TTTATCAGGATCAAA EcSMS35_1431 1416964 - 1417236 + | hypothetical protein nudG 1417609 - 1417202 - | CTP pyrophosphohydrolase TERM 1843 1417850 - 1417867 + G 91 -9.1 -4.63218 | CGCTGGGCTGGTATC TGGCGGC GCTA GTCGCCA TTTTGTTGAACAGGC TERM 1844 1418166 - 1418184 + G 72 -6 -4.35604 | CGGGTTAACCGAAGG CAGCGAGA CGA TTTTGCTG TTTGTTCTGAGTTGC TERM 1845 1418287 - 1418313 + G 95 -15.2 -2.75803 | GTGTGGAGTGGGTAT CTGACGCTGAAG TCG CTCCAGCGTCAG TAATTGCAATGTTAT EcSMS35_1432 1417696 - 1418316 + | CDP-alcohol phosphatidyltransferase family protein EcSMS35_1433 1419632 - 1418325 - | rhodanese-like domain-containing protein TERM 1846 1418352 - 1418367 + g 81 -4.6 -5.09895 | overlap 1418353 GTCCGGGCCGCGTTC ACCGGT TGCT ACCGGA TTTTTTGGATCGCTG TERM 1847 1418966 - 1418981 + g 70 -6.8 -4.08767 | opp_overlap 1418954 1418957 GAATGACCGTGGTGT CATGGC GAAT GCCGTG TTTTGCCAGCATCGC EcSMS35_1434 1420352 - 1419699 - | ABC transporter, ATP-binding protein TERM 1848 1419935 - 1419911 - G 80 -11.3 -3.35679 | TTGGCTGAGCGAGAA GGGCGCGTAGC AGA GCAACGCGCGC TCGCTGACCGCCAGA ynjC 1421887 - 1420352 - | ABC transporter, permease protein TERM 1849 1421165 - 1421176 + gr 74 -7.2 -4.22748 | CAGCAGCAGCAGGCT GGCG AGTG CGCC TTTCGTTTGTTGATC EcSMS35_1436 1423026 - 1421860 - | hypothetical protein TERM 1850 1421977 - 1421991 + gr 82 -7.1 -4.59773 | TTGCAATGTTTCGCG CTGCC CGTCA GGCAG TTTTTGCGGATCGAG TERM 1851 1422200 - 1422188 - GR 75 -9.1 -3.64703 | opp_overlap 1422175 1422188 CTGCTTGCAGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1852 1422188 - 1422200 + gr 95 -9.1 -5.14965 | opp_overlap 1422188, overlap 1422175 CTGCTTGCAGGCAAA TCGCC GCT GGCGA TTTTTTGCTGCGCAT TERM 1853 1422351 - 1422387 + gr 70 -5.8 -4.28045 | gap 2, opp_overlap 1422371 GATATTGCCACAAGG GCGCAGTGACGCGGGCGA AAG TCGCAT-CGTC-CGGCGC TTCTTTTAATGCTGT TERM 1854 1422667 - 1422620 - GR 73 -4.9 -4.67353 | gap 2, opp_overlap 1422655 GTAGGCACTGAAAAA TCTTCCCGCACCGGCAGCTGTGT GTCG ACATAGC-GCCAGTT-GGGCAGA GTCTCCGCCCAGCCC TERM 1855 1422956 - 1422970 + gr 73 -10 -3.06696 | TCATTTTTTATTTCC TGCCAG TCA CTGGCA TGTGTTGCCAAAGAA EcSMS35_1437 1423584 - 1423036 - | carboxymuconolactone decarboxylase family protein EcSMS35_1438 1424291 - 1423584 - | hypothetical protein TERM 1856 1423970 - 1423953 - G 88 -5.5 -5.24129 | gap 1, overlap 1423956 1423958 TCTGGCGATAAAAAA GCACAGCG CCG CGCCG-GC CATCGAACTGGTCCA EcSMS35_1439 1424983 - 1424306 - | hypothetical protein TERM 1857 1424462 - 1424472 + g 71 -2.4 -4.92791 | GCTATCCAGACACAC CAGG CAG CCCG TTTTCTTCTCTTCTG EcSMS35_1440 1425698 - 1424988 - | hypothetical protein TERM 1858 1425557 - 1425545 - G 79 -4.9 -4.92757 | TGATGAATAACAAAA TATAG AGG CTATA ACCGAACAATCCGCT xth 1426671 - 1425865 - | exodeoxyribonuclease III TERM 1859 1426304 - 1426291 - G 78 -8.1 -4.39426 | opp_overlap 1426296 CAGATTCTGATAAAA CTGCG CCTT CGCAG GGAATTTTATCGGAT TERM 1860 1426449 - 1426435 - G 73 -9.2 -3.57144 | opp_overlap 1426438 1426440 GTCGTCACCGGGAAA GCCGCG ACG CACGGC AATCGGCGTCTCTTT EcSMS35_1442 1426854 - 1426684 - | hypothetical protein TERM 1861 1427814 - 1427796 - g 74 -7.4 -4.08144 | TTGATGAAGTACAAA CCGGTG TCGGGCG CACCGG GGAACTGTATGCCTA astC 1427117 - 1428337 + | succinylornithine transaminase TERM 1862 1428690 - 1428708 + G 79 -10.2 -3.85698 | opp_overlap 1428683 CGATCACACCGGCAG CAGCGAGC TGT GCACGCTG TTTCTCGACCCGGAC TERM 1863 1429234 - 1429271 + G 70 -6.1 -4.19735 | gap 1, opp_overlap 1429225 AATTATCACCATTTC CGCGTGG-TGCTGGTGCG TAC CGATCCGGCAACCGAGCG TTTGATTTTAACCGC astA 1428334 - 1429368 + | arginine N-succinyltransferase astD 1429365 - 1430843 + | succinylglutamic semialdehyde dehydrogenase TERM 1864 1431278 - 1431293 + G 70 -4.7 -4.56597 | opp_overlap 1431278 GCCCCCGTCACCGAA TCGCT GTTAAA AGCGA TTTTTGACGACGAAG TERM 1865 1431572 - 1431553 - g 72 -7 -4.25104 | opp_overlap 1431553 1431565 TTTCGCCCAGCAAAA CCCGGACG TTAT CGACCAGG GCGTTTTTCATAATG TERM 1866 1431988 - 1431968 - g 70 -6.8 -4.06864 | TTGACAGAAGAAGAA CGCCGG GCAGTGAAT CCGGCG GTGATGATGAACGAT astB 1430840 - 1432183 + | succinylarginine dihydrolase TERM 1867 1432228 - 1432215 - g 81 -4.5 -5.055 | opp_overlap 1432204, overlap 1432204 1432216 TTAACGGGTAAAAAA CCGGT TATC ACCGA GCGAGAAATCAACGG astE 1432176 - 1433144 + | succinylglutamate desuccinylase TERM 1868 1433177 - 1433145 - f 71 -8.6 -3.43246 | gap 1, opp_overlap 1433144 1433149, overlap 1433147 1433148 GAAAAAATAAGCTAA TACTTACCCGCAGAA ATCA TTCTGCGGGTAT-TA AGTTACTTTCTTATA TERM 1869 1433176 - 1433147 - f 70 -9.3 -3.25449 | opp_overlap 1433144 1433149, overlap 1433145 1433148 AAAAATAAGCTAATA CTTACCCGCAGAA ATCA TTCTGCGGGTATT AAGTTACTTTCTTAT TERM 1870 1433175 - 1433148 - f 81 -12.8 -2.53642 | opp_overlap 1433144 1433149, overlap 1433147 1433145 AAAATAAGCTAATAC TTACCCGCAGAA ATCA TTCTGCGGGTAT TAAGTTACTTTCTTA TERM 1871 1433149 - 1433174 + F 100 -16.3 -3.2827 | opp_overlap 1433148 1433147 1433145, overlap 1433144 AAATAAGCTAATACT TACCCGCAGAA ATCA TTCTGCGGGTA TTAAGTTACTTTCTT TERM 1872 1433315 - 1433344 + F 77 -4.3 -5.12707 | opp_overlap 1433342, overlap 1433317 1433318 1433342 TCTCCATCAAATTTT CTTTTTTTCTCCA TAAT TGGCGAAAAAGTG TTTTTTACACTTTCA spy 1433474 - 1433959 + | spheroplast protein Y TERM 1873 1433980 - 1434038 + F 100 -8.3 -5.55769 | gap 2, opp_overlap 1433981 1433983, overlap 1433983 CAGCCAAAAAACTTA --AGACCGCCGGTCTTGTCCACTACCTTG CAG TAATGCGGTGGACAGGATCGGCGGTTTTC TTTTTTGTTCTCAAA TERM 1874 1434035 - 1433981 - f 88 -12.1 -3.52779 | opp_overlap 1433980 1433983, overlap 1433983 AGCCAAAAAACTTAA GACCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGGTT TTCTTTTTTGTTCTC TERM 1875 1433983 - 1434033 + F 100 -19.8 -5.55001 | opp_overlap 1433983 1433981, overlap 1433980 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTTG CAG TAATGCGGTGGACAGGATCGGCGG TTTTCTTTTTTGTTC TERM 1876 1434033 - 1433983 - f 100 -14.7 -3.3244 | opp_overlap 1433980 1433983, overlap 1433981 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTT GCAGT AATGCGGTGGACAGGATCGGCGG TTTTCTTTTTTGTTC EcSMS35_1450 1434162 - 1434737 + | hypothetical protein cho 1435584 - 1434697 - | excinuclease cho TERM 1877 1435777 - 1435748 - R 72 -8.5 -3.63515 | opp_overlap 1435745 1435742, overlap 1435749 TTGTAGGTCGAATAA GGCGTTCACGCCG CATC CGGCGTGAACAAA GTACTCTTTTTCGCA TERM 1878 1435776 - 1435749 - R 79 -12 -2.77895 | opp_overlap 1435745 1435742, overlap 1435748 TGTAGGTCGAATAAG GCGTTCACGCCG CATC CGGCGTGAACAA AGTACTCTTTTTCGC nadE 1436641 - 1435814 - | NAD+ synthetase TERM 1879 1436603 - 1436615 + g 72 -4.7 -4.69324 | overlap 1436604 ATTAATCTGCGGTTT TGCGC CCA GCGCC TTTATTATTTGTTGT osmE 1436843 - 1437181 + | osmotically-inducible lipoprotein E TERM 1880 1437216 - 1437231 + F 100 -7.5 -5.78622 | opp_overlap 1437216 GAGTTACAACGGAAA CCGGC CATTGT GCCGG TTTTTTTTGGCCTGA chbB 1437441 - 1437800 + | PTS system, N,N'-diacetylchitobiose-specific IIB component TERM 1881 1437846 - 1437865 + F 85 -7.9 -4.62904 | opp_overlap 1437846 1437844 1437840 TTTCATAAATCAATA CCGCAAT ATTTAA ATTGCGG TTTTTAAGGGTATTT chbC 1437885 - 1439243 + | PTS system, N,N'-diacetylchitobiose-specific IIC component chbA 1439294 - 1439644 + | PTS system, N,N'-diacetylchitobiose-specific EIIA component TERM 1882 1439761 - 1439749 - g 71 -3.4 -4.79352 | TTATCTACAACAAAA CTGA GAGTA TCAG CGGACTGCATCAGCA chbR 1439655 - 1440494 + | transcriptional regulator ChbR chbF 1440598 - 1441950 + | 6-phospho-beta-glucosidase EcSMS35_1458 1441963 - 1442712 + | hypothetical protein TERM 1883 1442717 - 1442757 + T 75 -9.8 -3.5394 | gap 1, opp_overlap 1442717 1442718, overlap 1442719 1442725 TTGATGTGTAAGTAA GGTGG-TAAGGTCACTCCC CAGG GGGCGTGACCTTATCCATA TTTACGCCGGAATTT TERM 1884 1442756 - 1442718 - T 74 -11.1 -2.60723 | gap 1, opp_overlap 1442717 1442719 1442725, overlap 1442717 TGATGTGTAAGTAAG GTGG-TAAGGTCACTCCC CAGG GGGCGTGACCTTATCCAT ATTTACGCCGGAATT TERM 1885 1442719 - 1442755 + T 100 -14.6 -3.34517 | gap 1, opp_overlap 1442718 1442717, overlap 1442717 1442725 GATGTGTAAGTAAGG TGG-TAAGGTCACTCCC CAGG GGGCGTGACCTTATCCA TATTTACGCCGGAAT TERM 1886 1442725 - 1442748 + T 93 -12.4 -3.452 | opp_overlap 1442718 1442717, overlap 1442719 1442717 TAAGTAAGGTGGTAA GGTCACTCCC CAGG GGGCGTGACC TTATCCATATTTACG katE 1445020 - 1442759 - | catalase HPII TERM 1887 1443601 - 1443579 - G 76 -7.6 -4.21194 | opp_overlap 1443579 1443577 1443590 1443595 TGGTATGATTCAAAA CCGCCGCG TTTCGGC CCCGGCGG TGTTTCGCGCGGCCA cedA 1445224 - 1445466 + | cell division activator CedA TERM 1888 1445501 - 1445473 - f 75 -11 -2.87769 | opp_overlap 1445478, overlap 1445468 ACTGAGTAAAGATTA CGTACCTCCCGG TTTTG CCGGGAGTTACA TGGCCTGAAATTTTG TERM 1889 1445478 - 1445496 + F 83 -12.4 -3.06796 | opp_overlap 1445473 1445468 GTAAAGATTACGTAC CTCCCGGT TTT GCCGGGAG TTACATGGCCTGAAA TERM 1890 1446136 - 1446122 - g 87 -5 -5.24129 | TTCGCCCAGAAAAAA TGACCA ATT TGATCA ATATAAAAAACAGGT TERM 1891 1446554 - 1446515 - g 73 -4.2 -4.74706 | gap 1, overlap 1446519 TGGAACATTTAAAAA GTAAGGCAACGGTCCCTAT ACA AAACGGACCGTTGCCAG-C ATAAGAATTAACGGT TERM 1892 1446551 - 1446519 - g 100 -14.9 -3.83644 | overlap 1446515 ACATTTAAAAAGTAA GGCAACGGTCCCTAT ACA AAACGGACCGTTGCC AGCATAAGAATTAAC EcSMS35_1461 1445755 - 1446558 + | hypothetical protein EcSMS35_1462 1447953 - 1446562 - | sodium/dicarboxylate symporter family protein TERM 1893 1447394 - 1447380 - G 70 -3.6 -4.59853 | GGAATGCGGCAAAAA TTACCA CGC TGATAA TTGACGTCGGATTGG EcSMS35_1463 1448676 - 1448086 - | putative metal-dependent hydrolase, membrane-bound TERM 1894 1448668 - 1448653 - G 73 -4 -4.74767 | gap 1, overlap 1448655 ACAAGCAATAGAAAA GAGAAGG TGA CCTTC-C GCCGTCATGATAAAA TERM 1895 1448667 - 1448655 - G 72 -7.7 -3.97283 | overlap 1448653 AAGCAATAGAAAAGA GAAGG TGA CCTTC CGCCGTCATGATAAA TERM 1896 1448835 - 1448808 - R 100 -17.8 -4.16301 | opp_overlap 1448808 AATTCAGATAAAGAA CCAGGAGCAGTG TGAT CACTGCCCCTGG TCATTAACCGAGAAG TERM 1897 1448808 - 1448835 + r 93 -15.6 -2.70932 | opp_overlap 1448808 AATTCAGATAAAGAA CCAGGAGCAGTG TGAT CACTGCCCCTGG TCATTAACCGAGAAG EcSMS35_1464 1449507 - 1448839 - | HAD family hydrolase TERM 1898 1449839 - 1449850 + G 90 -7.2 -5.15381 | GATCGATATGATGCA GGCG AATA CGCC TTTTTTGAATCTGTT TERM 1899 1449916 - 1449936 + G 93 -8.3 -4.84359 | overlap 1449919 GCGTGAACGTTATGT TCTGGATGA TTT TCATCCTGA TTTTTGTCGGACTGG EcSMS35_1465 1449654 - 1450190 + | hypothetical protein TERM 1900 1450197 - 1450213 + T 74 -10.8 -2.64099 | opp_overlap 1450197, overlap 1450196 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCACCCCA TERM 1901 1450213 - 1450197 - T 90 -10.8 -4.43477 | opp_overlap 1450196 1450197 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCACCCCA EcSMS35_1466 1451091 - 1450231 - | fructosamine kinase TERM 1902 1450795 - 1450783 - G 90 -9.1 -4.48713 | CTGACCAAGAATAAA TGCGC TAT GCGCA TCCAGCGGGCGAGGA EcSMS35_1467 1451487 - 1451197 - | hypothetical protein TERM 1903 1451560 - 1451579 + r 73 -9.3 -3.46068 | overlap 1451558 ACAGGTTGGTGGTGA TTCCCCC AATGCA GGGGGAA TGTTTCAGTTAGCGG pfkB 1452517 - 1451588 - | 6-phosphofructokinase TERM 1904 1452760 - 1452776 + H 100 -5.8 -5.88565 | CTTAAGAAAGTTTCC GGGACC GCGAA GGTCTC TTTTTTTGTTGTACG TERM 1905 1452937 - 1452927 - g 83 -5.4 -5.03314 | GCCAGCGCTAAAAAA CCTT TCG AAGG CAATCTGAACGCAGG TERM 1906 1453324 - 1453312 - g 73 -9.1 -3.67141 | opp_overlap 1453312 ACAATGCCAGTGAAA CCCAG CCG CTGGG TTATGCCTCCGGGGC EcSMS35_1469 1452804 - 1453562 + | hypothetical protein TERM 1907 1453569 - 1453597 + T 100 -13.1 -4.62475 | opp_overlap 1453568, overlap 1453571 AGCATGTAACATTAT CTGCCGGACCGTA GTA TGCGGTCTGGCTG TTTTCGTTTGTCACT TERM 1908 1453571 - 1453595 + T 100 -14.3 -3.91676 | opp_overlap 1453568, overlap 1453569 CATGTAACATTATCT GCCGGACCGTA GTA TGCGGTCTGGC TGTTTTCGTTTGTCA EcSMS35_1470 1453833 - 1453615 - | hypothetical protein TERM 1909 1453881 - 1453862 - R 87 -8 -4.90302 | TATGAATAAAATAAA GTATATGT ATCA ACATATAC ATCGTAAATATTTAG EcSMS35_1471 1455795 - 1453897 - | ankyrin repeat-containing protein TERM 1910 1454690 - 1454702 + g 73 -9.1 -3.62522 | ATAAGCTGTTGAGTC TGGCC TGT GGCCA TTATTAACAACATTG TERM 1911 1455488 - 1455498 + g 86 -4 -5.34555 | opp_overlap 1455488 GTTTCCAGTAATAAG GAAA TGA TTTC TTTTTTATAGTGTAA TERM 1912 1457009 - 1456999 - g 90 -4.6 -5.36441 | TGGGCAGACAAAAAA GCGC TTA ACGC TTACCTGCAGCGCCT TERM 1913 1457046 - 1457032 - g 73 -9.2 -3.61715 | CAGCGCCTGGAAGAA GCCGCG AAA CGCGAC CACCGTAAAATCGGT TERM 1914 1457247 - 1457237 - g 71 -2.4 -5.00616 | TCCTGTGGGAAAAAA CCGG TCA CTGG GACAACTACAAAGAT thrS 1456318 - 1458246 + | threonyl-tRNA synthetase TERM 1915 1458650 - 1458626 - g 72 -6.4 -4.39571 | gap 1 GTGATAAAGCCAAAA TCACG-CTGCG TTTC CGCGGTCGTGA GATGGCGCACCAGCA infC 1458358 - 1458792 + | translation initiation factor IF-3 TERM 1916 1458801 - 1458847 + F 74 -5.9 -4.66537 | gap 1, opp_overlap 1458805 1458809 1458810, overlap 1458810 1458831 ACAGTAAGGCCTTCA AGT-AGCAATGTCTGTGGAGCC TTCG GGCTTCACAGGCTTTGTTCGCC TTTGTTTCGTTTATT TERM 1917 1458810 - 1458837 + F 100 -14.2 -4.23707 | opp_overlap 1458810 1458809 1458805, overlap 1458801 1458831 CCTTCAAGTAGCAAT GTCTGTGGAGCC TTCG GGCTTCACAGGC TTTGTTCGCCTTTGT rpmI 1458889 - 1459086 + | ribosomal protein L35 rplT 1459140 - 1459496 + | ribosomal protein L20 TERM 1918 1459508 - 1459526 + F 89 -10.3 -4.54727 | opp_overlap 1459508 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1919 1459526 - 1459508 - f 78 -10.3 -3.62418 | opp_overlap 1459508 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1920 1459713 - 1459728 + F 100 -10.4 -5.71712 | opp_overlap 1459713 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1921 1459728 - 1459713 - f 77 -10.4 -3.55815 | opp_overlap 1459713 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1922 1459919 - 1459907 - g 71 -2.6 -5.0133 | TATTTGGGTAAAAAA GGGC ACTTA ACCC TTCAGATGACGACCC pheS 1459802 - 1460785 + | phenylalanyl-tRNA synthetase, alpha subunit pheT 1460800 - 1463187 + | phenylalanyl-tRNA synthetase, beta-subunit ihfA 1463192 - 1463491 + | integration host factor, alpha subunit TERM 1923 1463509 - 1463523 + F 100 -12.8 -5.80951 | opp_overlap 1463509 TGATCTAACTAAAAA GGCCGC TCT GCGGCC TTTTTTCTTTTCACT TERM 1924 1463523 - 1463509 - f 100 -12.8 -4.88407 | opp_overlap 1463509 TGATCTAACTAAAAA GGCCGC TCT GCGGCC TTTTTTCTTTTCACT btuC 1463592 - 1464572 + | vitamin B12 import system permease protein btuC btuE 1464635 - 1465186 + | vitamin B12 transport periplasmic protein btuE btuD 1465186 - 1465935 + | vitamin B12 import ATP-binding protein BtuD EcSMS35_1482 1466013 - 1466477 + | NlpC/P60 family lipoprotein TERM 1925 1466490 - 1466516 + F 100 -15.2 -3.79747 | opp_overlap 1466490 TAGTATGTCGAAAAA TGGACGGCGATG ATA CATCTCCGTCCA TTTACTCCTGAATAC TERM 1926 1466516 - 1466490 - f 100 -15.2 -4.60487 | opp_overlap 1466490 TAGTATGTCGAAAAA TGGACGGCGATG ATA CATCTCCGTCCA TTTACTCCTGAATAC EcSMS35_1483 1466724 - 1467437 + | hypothetical protein EcSMS35_1484 1467500 - 1468936 + | hypothetical protein EcSMS35_1485 1469158 - 1468940 - | hypothetical protein TERM 1927 1469257 - 1469234 - R 100 -15.4 -3.86822 | opp_overlap 1469224 CAAGTTGCGCAGAAA TGCCCATTCC GTCA GGAATGGGCA CGCATTCAGAAGCGG aroH 1470309 - 1469263 - | 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive TERM 1928 1469655 - 1469668 + g 79 -4.5 -5.00895 | opp_overlap 1469655, overlap 1469645 1469656 CACTGGTCTGATAGA TGGTC ATCT GACCG TTTTTGTCTGGTGAG TERM 1929 1470479 - 1470449 - R 70 -2.7 -4.98468 | gap 1, opp_overlap 1470458, overlap 1470454 ATAACAAAAAAATAA GT-TAATGCACTAG TTCT CTAGTACATTCGAC GGCTAAGGCCCATGA EcSMS35_1487 1471299 - 1470466 - | hypothetical protein EcSMS35_1488 1471410 - 1471577 + | hypothetical protein TERM 1930 1473319 - 1473337 + G 78 -8 -4.36914 | opp_overlap 1473318, overlap 1473331 1473334 TCTGACTGAAGGGAT CGCGACGC TGG GTGCCGCG TTTTATCCGAAGCGC ppsA 1471631 - 1474009 + | phosphoenolpyruvate synthase TERM 1931 1474039 - 1474017 - f 100 -11.9 -5.39681 | opp_overlap 1474014 1474013 1474017 ACAAGTAAATAAAAA CCCGGCGGC GTTCA GTCGCCGGG TCCATTTCTATATCC TERM 1932 1474017 - 1474039 + F 87 -14.1 -2.74987 | opp_overlap 1474017, overlap 1474014 1474013 ACAAGTAAATAAAAA CCCGGCGGC GTTCA GTCGCCGGG TCCATTTCTATATCC TERM 1933 1474478 - 1474457 - f 82 -10.1 -4.14615 | AGAAAACAGGATAAA TTCCCTCCG CGAG CGGTGGGAA ACAGCTACAGGGATT EcSMS35_1490 1474498 - 1475898 + | divalent anion:Na+ symporter (DASS) family protein TERM 1934 1476562 - 1476581 + G 70 -10.6 -2.76696 | overlap 1476561 TTCTGACGCTGCCAG GCGGCGCG AGTA CGCGCGGC GTTATTGACAAAACG EcSMS35_1491 1475934 - 1476893 + | D-isomer specific 2-hydroxyacid dehydrogenase family protein EcSMS35_1492 1476904 - 1477383 + | hypothetical protein EcSMS35_1493 1477396 - 1478139 + | short chain dehydrogenase/reductase family oxidoreductase TERM 1935 1478178 - 1478151 - T 81 -11.5 -3.14522 | opp_overlap 1478151 1478155, overlap 1478155 TTAATCGAGATTGAA TAAAGCACCTT GCGTGT AAGGTGCTTTA TTATTTATGACTTAT TERM 1936 1478151 - 1478178 + T 93 -12.2 -4.11906 | opp_overlap 1478151 1478155, overlap 1478155 TTAATCGAGATTGAA TAAAGCACCTTG CGTG TAAGGTGCTTTA TTATTTATGACTTAT TERM 1937 1478174 - 1478155 - T 76 -7.9 -4.23213 | opp_overlap 1478151 1478155, overlap 1478151 TCGAGATTGAATAAA GCACCTT GCGTGT AAGGTGC TTTATTATTTATGAC TERM 1938 1478155 - 1478174 + T 89 -8.6 -4.63048 | opp_overlap 1478155 1478151, overlap 1478151 TCGAGATTGAATAAA GCACCTTG CGTG TAAGGTGC TTTATTATTTATGAC fadK 1479830 - 1478190 - | short-chain-fatty-acid--CoA ligase TERM 1939 1478934 - 1478914 - G 78 -5.3 -4.83246 | CCACAAAGAAAGAAA CGCAGCGCT GAA AGGTCTGCG GGCTGTTTCTCTAGT TERM 1940 1478985 - 1478973 - G 91 -10.5 -4.16904 | AAGATCATAGACAAA CGGCG TTG CGCCG AGCATACAGGTGCAA TERM 1941 1479518 - 1479538 + g 70 -6.7 -4.07568 | opp_overlap 1479516 1479518 1479530, overlap 1479519 GCCAGGAAGGCAACA GCGGTACGG AAA CCGCACCGA TTTTCAGGCAGGCAA TERM 1942 1479876 - 1479851 - R 91 -11.2 -3.81755 | gap 1, overlap 1479854 ACTCTCGAAACAGAA CATCAGGCCCG AGATG CGGGCCTG-TG GGATGCATGATTAGC TERM 1943 1479874 - 1479854 - R 86 -14 -2.69057 | overlap 1479851 CTCGAAACAGAACAT CAGGCCCG AGATG CGGGCCTG TGGGATGCATGATTA EcSMS35_1495 1480180 - 1479887 - | iron-sulfur cluster-binding protein EcSMS35_1496 1481466 - 1480177 - | protein FixC-like protein TERM 1944 1480363 - 1480341 - G 71 -9.1 -3.47361 | overlap 1480339 GATACTGACTAAACA GGCGCGGAT TTTCC ATCAGCGCC GGGATCTTGCGAAAA EcSMS35_1497 1482459 - 1481521 - | protein FixB-like protein TERM 1945 1482031 - 1482052 + g 70 -5.1 -4.34402 | GGGTGCAAGGGTAAT GATCGCCAG CGGG CTGTTGATC TTTTCCTGTGCGAAC EcSMS35_1498 1483243 - 1482479 - | protein FixA-like protein EcSMS35_1499 1483280 - 1483456 + | hypothetical protein TERM 1946 1483494 - 1483526 + F 81 -6.3 -4.90869 | opp_overlap 1483478 1483501, overlap 1483502 GCGGTTGTATAACCG CAATACACGCCGTAT TTT ATCCGGCATATATTG TTTTTGCTTGCTCAT EcSMS35_1500 1483559 - 1484470 + | AraC family transcriptional regulator TERM 1947 1484509 - 1484472 - T 91 -11.2 -3.85698 | opp_overlap 1484471 1484468 1484464, overlap 1484473 1484497 GTCTTGCCGGATAAA TCTGGCGGCGCAGTTT GTTAAG AAGCTGCGCCGCCTGC AGATTATTTGTTCTG TERM 1948 1484508 - 1484473 - T 89 -14.7 -2.91276 | opp_overlap 1484471 1484468 1484464, overlap 1484472 1484497 TCTTGCCGGATAAAT CTGGCGGCGCAGTTT GTTAAG AAGCTGCGCCGCCTG CAGATTATTTGTTCT EcSMS35_1501 1485667 - 1484513 - | acyl-CoA dehydrogenase TERM 1949 1485548 - 1485560 + g 70 -6.2 -4.2558 | overlap 1485532 CCGCATAAACTCACG CGGG TATGT CCCG TTTTGATCGCAGGTG pct 1487273 - 1485678 - | propionate CoA-transferase TERM 1950 1485894 - 1485907 + g 81 -6.7 -4.62069 | opp_overlap 1485886, overlap 1485890 ACGAACATCCAGCCC TCGCT CGAG AGCGA TTTTTCCGCTGAAAG TERM 1951 1486401 - 1486389 - G 73 -9.1 -3.63515 | opp_overlap 1486387 GCGCATTTCGAATAA TGCGC GCC GCGCA ACTAATTTACGTTGG TERM 1952 1487378 - 1487411 + r 81 -9.6 -3.86312 | overlap 1487381 TAAAAATACTTTTTT TAGTTCGGCGGGGG AGGGTA TTCCCGCCGAAATA TTATTGCTTATGCCT TERM 1953 1487381 - 1487408 + r 77 -11.3 -2.70018 | overlap 1487378 AAATACTTTTTTTAG TTCGGCGGGGG AGGGTA TTCCCGCCGAA ATATTATTGCTTATG aroD 1488177 - 1487419 - | 3-dehydroquinate dehydratase, type I TERM 1954 1487472 - 1487487 + g 91 -5.4 -5.40072 | gap 1 CATTTACCGAGATTT GCC-CTG GCG CAGAGGC TTTTTTTACCGCACC EcSMS35_1504 1489074 - 1488208 - | putative shikimate 5-dehydrogenase TERM 1955 1488611 - 1488623 + g 70 -3.5 -4.66535 | opp_overlap 1488618 AACTCATCCCGACGG TTAAA GAG TTTAA TTTCTTTTAAACCTT EcSMS35_1505 1490351 - 1489086 - | major facilitator transporter ydiM 1491792 - 1490578 - | major facilitator family transporter EcSMS35_1507 1492248 - 1491892 - | hypothetical protein TERM 1956 1492413 - 1492394 - R 100 -9.3 -5.82388 | AAATGTTAAAAAAAA GCCCATC GTGGGA GATGGGC AAAGACTACACACAG TERM 1957 1492669 - 1492649 - R 100 -16.9 -3.62775 | opp_overlap 1492642 1492642 AGCAGGGGTTAACAA TCAGGCGGC AGA GCCGCCTGA TGAGAAATTACTTAT ydiK 1493789 - 1492677 - | inner membrane protein YdiK TERM 1958 1494576 - 1494597 + G 76 -3.7 -5.00616 | opp_overlap 1494573 AGACCAACTCAATCA GTACCTGAA ACCG TTCGGCTAC TTTTTTGCGCCGGAG EcSMS35_1509 1494178 - 1497234 + | oxidoreductase, FAD-binding ydiL 1497231 - 1497641 + | esterase YdiI TERM 1959 1497684 - 1497719 + F 75 -9.8 -3.48276 | overlap 1497686 1497687 ATTGCTTTTGGTCAT TATCTGCACAGTAAAC GGTG GTATACTGTGCAGGTC TTGTCTAAAAGCGAG TERM 1960 1497686 - 1497717 + F 90 -12.4 -3.31726 | overlap 1497684 1497687 TGCTTTTGGTCATTA TCTGCACAGTAAAC GGTG GTATACTGTGCAGG TCTTGTCTAAAAGCG TERM 1961 1497687 - 1497716 + F 86 -13.7 -2.58822 | overlap 1497686 1497684 GCTTTTGGTCATTAT CTGCACAGTAAAC GGTG GTATACTGTGCAG GTCTTGTCTAAAAGC EcSMS35_1511 1497741 - 1497929 + | hypothetical protein TERM 1962 1498185 - 1498155 - f 100 -19.2 -3.86897 | opp_overlap 1498155 CGGATGGGGTAGAAA CCCTTAAGCCTGTG TCG CACAGACTTAAGGG TTTTCTTATTTCTGA TERM 1963 1498155 - 1498185 + F 100 -17 -5.05116 | opp_overlap 1498155 CGGATGGGGTAGAAA CCCTTAAGCCTGTG TCG CACAGACTTAAGGG TTTTCTTATTTCTGA sufA 1498478 - 1498846 + | FeS assembly scaffold SufA TERM 1964 1499194 - 1499205 + G 70 -3.6 -4.65895 | overlap 1499179 GCGGTGCAGCAAACT GGTG CGAA CGCC TTTTTAAGTAAAGAG sufB 1498855 - 1500342 + | FeS assembly protein SufB sufC 1500352 - 1501098 + | FeS assembly ATPase SufC sufD 1501073 - 1502344 + | FeS assembly protein SufD TERM 1965 1502894 - 1502883 - g 70 -5.8 -4.27316 | GCTGGGAACGGAAAA TCCG CTGG CGGA AATGATCACGCTTGC sufS 1502341 - 1503561 + | cysteine desulfurase sufE 1503574 - 1503990 + | cysteine desulfuration protein SufE TERM 1966 1504309 - 1504288 - g 71 -2.1 -4.88388 | opp_overlap 1504289 1504291, overlap 1504289 AGAAGGGGATAAAAA CCTTCAGGC CATC GCCCGACGT TTTGATACTGCGGCA EcSMS35_1518 1504139 - 1505143 + | LysM/ErfK/YbiS/YcfS/YnhG family protein TERM 1967 1505185 - 1505167 - T 100 -14.6 -5.81412 | opp_overlap 1505167 GGCAGGCAAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCACTTCACAG TERM 1968 1505167 - 1505185 + T 100 -14.6 -4.74103 | opp_overlap 1505167 GGCAGGCAAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCACTTCACAG lpp 1505443 - 1505207 - | major outer membrane lipoprotein TERM 1969 1505281 - 1505306 + g 70 -9.7 -3.17212 | gap 1 CTTTAGCAGCCTGAA CGTCG-GAACGC ATT GCGTTCACGTCG TTGCTCAGCTGGTCA TERM 1970 1505721 - 1505706 - R 100 -11.8 -5.99154 | opp_overlap 1505706 GATTAAATAAAAAAA GCGCCC ATCA GGGCGC TTCGATATACAAATT TERM 1971 1505706 - 1505721 + r 81 -11.8 -3.12847 | opp_overlap 1505706 GATTAAATAAAAAAA GCGCCC ATCA GGGCGC TTCGATATACAAATT pykF 1507166 - 1505754 - | pyruvate kinase I TERM 1972 1506206 - 1506194 - G 81 -9.1 -4.08706 | opp_overlap 1506194 1506193 1506191 TCGCCATGATAGAAA CCGCT TCC AGCGG GTATTTACCTTTTGC EcSMS35_1521 1507762 - 1507932 + | hypothetical protein TERM 1973 1507936 - 1507967 + T 77 -8.9 -3.83675 | gap 1, opp_overlap 1507931, overlap 1507937 CTGGTAAAATGACCA T-TCAGGATGAGGC GATAA GCTTCATCCTGATA TTCTTGCTTCAGTTG TERM 1974 1507937 - 1507965 + T 100 -14 -3.4945 | opp_overlap 1507931, overlap 1507936 TGGTAAAATGACCAT TCAGGATGAGGC GATAA GCTTCATCCTGA TATTCTTGCTTCAGT TERM 1975 1508203 - 1508213 + T 76 -2.6 -5.31275 | opp_overlap 1508203 GTTAAGGGCTCAGAA TAAT CAC ATTA TTTTTTCTCCTAACC EcSMS35_1522 1508360 - 1508223 - | hypothetical protein EcSMS35_1523 1508388 - 1509014 + | iron-sulfur cluster-binding protein TERM 1976 1509961 - 1509945 - g 75 -4.3 -4.87037 | opp_overlap 1509948, overlap 1509946 AATACACAGTAAAAA TGAGCGG CTG CCACTCT TGCCCGATCCGTTGT TERM 1977 1511044 - 1511031 - g 70 -4.5 -4.55295 | opp_overlap 1511034, overlap 1511033 TGTTCTACAAAGAAA TGGGC TGGG ACCCA CAGCTTGGTTGTCCG EcSMS35_1524 1509035 - 1511137 + | aldehyde ferredoxin oxidoreductase EcSMS35_1525 1511150 - 1511788 + | hypothetical protein EcSMS35_1526 1511801 - 1512520 + | iron-sulfur cluster-binding protein EcSMS35_1527 1512517 - 1513302 + | nickel-dependent hydrogenase, b-type cytochrome subunit EcSMS35_1528 1513306 - 1514118 + | hypothetical protein TERM 1978 1514324 - 1514341 + T 73 -4.9 -4.6391 | gap 1, opp_overlap 1514326, overlap 1514326 AATCTTCGCCAACAT CA-GGGAT TTC ATCCCCTG TTTTCTGTAATTGTT TERM 1979 1515568 - 1515552 - T 76 -10.9 -3.05844 | opp_overlap 1515550 1515547 GGCGGTATTTCAATA CTGGCAA TAT TTGCCAG CATCAGTTTTGAGTT TERM 1980 1515824 - 1515838 + T 71 -8.5 -3.42379 | opp_overlap 1515824 AGACAGGGATGAAAA GGGCG CTAAC CGCCC TTGATTAAATTCTGT TERM 1981 1515838 - 1515824 - T 84 -8.5 -4.3014 | opp_overlap 1515824 AGACAGGGATGAAAA GGGCG CTAAC CGCCC TTGATTAAATTCTGT TERM 1982 1515853 - 1515871 + T 75 -9.6 -3.54676 | opp_overlap 1515849, overlap 1515849 CTTGATTAAATTCTG TCAGGCGA GTT TTGCCTGA TTGATTTGACTCAGT ydhR 1516158 - 1515853 - | YdhR protein TERM 1983 1516008 - 1515996 - G 78 -5.5 -4.77036 | opp_overlap 1516004 TTTCATCAGTAAAAA GGTAG ATC CCACC GGCTTCGTGGTTCTT TERM 1984 1516296 - 1516265 - H 80 -6.7 -4.76075 | gap 2, overlap 1516251 1516249 ACCAGATTAAGAAAA TCTGGTGCGTCCGAG TGGA CTCGAAC-CACC-GA CCCCCACCATGTCAA TERM 1985 1516555 - 1516566 + H 71 -2.2 -5.07486 | overlap 1516563 CTATATTTTGTTGAT TTGC AAGG GCGA TTTTTATTCAGGATC EcSMS35_1533 1516732 - 1517988 + | hypothetical protein TERM 1986 1518022 - 1517992 - T 100 -12.7 -4.57073 | gap 1, opp_overlap 1517996, overlap 1517996 CAGCCTGCGTAAAAA CACAGGCGCAACCC GTGA AGGTTGCGCCT-TG TCTTTACTAGCGAGC TERM 1987 1518019 - 1517996 - T 100 -14.6 -3.53855 | opp_overlap 1517996, overlap 1517992 CTGCGTAAAAACACA GGCGCAACCC GTGA AGGTTGCGCC TTGTCTTTACTAGCG TERM 1988 1517996 - 1518019 + T 100 -13.9 -3.86252 | opp_overlap 1517992 1517996 CTGCGTAAAAACACA GGCGCAACC CGTGAA GGTTGCGCC TTGTCTTTACTAGCG EcSMS35_1534 1519402 - 1518029 - | multidrug resistance protein MdtK TERM 1989 1519460 - 1519443 - H 80 -6.2 -4.85129 | overlap 1519434 ATGAGAGACTAAAAA GCCGCC TGAATG GGCAGC AAAAAGAAGAAGCAG TERM 1990 1520059 - 1520083 + G 70 -3.5 -4.69027 | gap 1, overlap 1520059 1520060 1520080 ACGGTATTAGCCTGA C-CGTCGGCG AAGTCA CGCCAACGCG TTTTTGCGTCCATTT ribE 1519617 - 1520258 + | riboflavin synthase, alpha subunit TERM 1991 1520286 - 1520266 - T 100 -18.3 -3.75897 | AAGCCTGAACTGAAA TCGCCCCCG GAG CGGGGGCGA TAGAATAGCCTCTAG cfa 1521446 - 1520298 - | cyclopropane-fatty-acyl-phospholipid synthase EcSMS35_1537 1522948 - 1521737 - | Bcr/CflA subfamily drug resistance transporter EcSMS35_1539 1523061 - 1523993 + | LysR family transcriptional regulator purR 1525015 - 1523990 - | transcriptional repressor PurR TERM 1992 1524117 - 1524133 + g 70 -6.5 -4.21462 | overlap 1524119 AGCATGTTGAACGCC GTTTCGC CCA GCGAATC TTTTGGCTGATGGAT TERM 1993 1524441 - 1524420 - G 81 -8.7 -4.37092 | gap 1, opp_overlap 1524418 1524420 ATCGCCTTCATAAAA CCGGCA-AGG CGG CCTGCGCCGG TGTTACGTTCCAGCG TERM 1994 1524478 - 1524490 + g 78 -10.5 -3.50393 | GGATAACGCCGATTT CGCGG TGA CCGCG TTCTATCAGATAACG TERM 1995 1524918 - 1524942 + g 91 -9.3 -4.71828 | overlap 1524911 GCCCACACGGCGTTG CGCGTTTCTTC AGC GACGAAACGTG TTTTGTTGATCACGT TERM 1996 1524966 - 1525000 + g 79 -4.4 -4.90079 | gap 1, opp_overlap 1524966, overlap 1524968 ATCACGTGTGACACA GTTGTAGTGGAAACG TTTGCT CGTTTC-GCTACATC TTTTATTGTTGCCAT EcSMS35_1540 1525284 - 1525403 + | hypothetical protein TERM 1997 1525452 - 1525486 + F 70 -3 -4.96276 | CTCCTTCCTGTTTGT TAGCAAAATGGCAAAA GTG TTTTCTCTTTTTGTTA TTTTCATTTTTTTGT TERM 1998 1526134 - 1526115 - g 73 -9.2 -3.68351 | TTCTCATTACCTAAA GGTGGCGC AGGG GCGCGACC TGAAGTGAAAAAAGA TERM 1999 1526722 - 1526706 - g 70 -5.1 -4.42653 | overlap 1526716 1526718 ATGTCAGCCAGAAAA CAACCTG AAA CAGTTTG CGTTGCCAACAGCTA EcSMS35_1541 1525569 - 1526738 + | major facilitator transporter TERM 2000 1526771 - 1526750 - T 100 -14.5 -5.38326 | opp_overlap 1526744 CTAATTAAACAAAAA CGCAGAAGG ATAA CCTTCTGCG TTACAGTTGCTGGCA sodB 1527465 - 1526884 - | superoxide dismutase (Fe) TERM 2001 1527589 - 1527560 - R 95 -12.3 -3.59432 | opp_overlap 1527560 1527560, overlap 1527556 1527561 GAGACAAAAGATGAA CTTACCCTGTTGC CGTA ACAACAGGGTAAA GTTTTAGCGAAGTGT TERM 2002 1527560 - 1527589 + r 71 -9.4 -3.05224 | opp_overlap 1527560 1527556 1527561, overlap 1527560 GAGACAAAAGATGAA CTTACCCTGTTG CCGTAA CAACAGGGTAAA GTTTTAGCGAAGTGT TERM 2003 1527560 - 1527590 + r 80 -9.2 -4.09511 | gap 1, opp_overlap 1527560 1527556 1527561, overlap 1527560 GAGACAAAAGATGAA CTT-ACCCTGTTG CCGTAA CAACAGGGTAAAG TTTTAGCGAAGTGTT TERM 2004 1527588 - 1527561 - R 86 -13.6 -2.74575 | opp_overlap 1527560 1527560, overlap 1527560 1527556 AGACAAAAGATGAAC TTACCCTGTTGC CGTA ACAACAGGGTAA AGTTTTAGCGAAGTG EcSMS35_1543 1528420 - 1527593 - | NlpC/P60 family protein TERM 2005 1527978 - 1527991 + g 84 -8.1 -4.62471 | ATCAGTTTATTCATT GCCAC TTTC GTGGC TTTTTGCACCTTCGC TERM 2006 1528011 - 1528040 + g 90 -7.9 -4.81249 | gap 1 TGCACCTTCGCTTTG TG-CGCGTCGGCAA GGG TTCCTGACGCGGCA TTTTTGACTTTCACA TERM 2007 1528102 - 1528113 + g 70 -3.6 -4.63486 | overlap 1528109 1528110 ACTTTTCGGTAAAGT TGGC TGAG GCCG TTTTATTGACGGCGT EcSMS35_1544 1528755 - 1529102 + | putative monothiol glutaredoxin TERM 2008 1529144 - 1529117 - T 93 -15.7 -3.01791 | opp_overlap 1529117, overlap 1529103 ATCCGTCCTGCAATA CTGACGGATGC GAACGG GCATCCGTCAG TTCTTTATCTATTCC TERM 2009 1529117 - 1529144 + T 100 -15.7 -4.21954 | opp_overlap 1529103 1529117 ATCCGTCCTGCAATA CTGACGGATGC GAACGG GCATCCGTCAG TTCTTTATCTATTCC lhr 1533769 - 1529153 - | DEAD/DEAH box helicase family protein Lhr TERM 2010 1529500 - 1529522 + g 73 -11.3 -2.75562 | overlap 1529490 1529487 1529499 1529491 1529520 GATCGTTGGCGGAGA GCGCCACTG GTGTA TAGTGGCGC GTTTGCGCGGTTTGT TERM 2011 1532572 - 1532560 - G 72 -6.9 -4.19624 | CACTGGCAACAGAAA GCGGC GTT GCCAC CTGAATCACCAGATC rnt 1534509 - 1533862 - | ribonuclease T TERM 2012 1534486 - 1534472 - G 77 -7.1 -4.45077 | opp_overlap 1534471 TAAAAACCACGAAAA CGGTC GCACA GACCG GTAAGTTGAGCGTTA TERM 2013 1534606 - 1534579 - R 88 -12.1 -3.46647 | gap 1, overlap 1534577 TCGATGCAGTAAAGA TG-CGGGCGTGA TGGGT TCACGCCCGGCA GGAGATTAGTTGCCC gloA 1535019 - 1534612 - | lactoylglutathione lyase TERM 2014 1534741 - 1534754 + g 71 -2.3 -5.01732 | overlap 1534742 ACGGGTCACGTTACC CCCGT TTTG ACGGA TTTTTTCGCACGCTT nemA 1536197 - 1535100 - | N-ethylmaleimide reductase TERM 2015 1535256 - 1535273 + g 73 -4.1 -4.8667 | ATCAATTAACCCTTT GCCGA TCAGCGTT TCGGC TTTTTCTACCGTGTA TERM 2016 1536247 - 1536228 - RH 82 -4.9 -5.24129 | overlap 1536229 TCTGGTGATAAAAAA TGCCTGC TAAACG GCAGGCG TCGCAATAATGGTTT TERM 2017 1536246 - 1536229 - RH 75 -8.4 -3.73995 | overlap 1536228 CTGGTGATAAAAAAT GCCTGC TAAACG GCAGGC GTCGCAATAATGGTT EcSMS35_1549 1536833 - 1536234 - | TetR family transcriptional regulator EcSMS35_1550 1536798 - 1537175 + | hypothetical protein ydhF 1537224 - 1538120 + | oxidoreductase YdhF TERM 2018 1538474 - 1538447 - g 81 -11.2 -3.69902 | gap 1, opp_overlap 1538446 1538444, overlap 1538440 1538438 ACCAAAGATGGCAAA GCCAGCGCCGCGG AAT CCGCAG-GCGGGC ATCTTGATCCACAAA TERM 2019 1538685 - 1538675 - g 72 -8.2 -3.78329 | opp_overlap 1538681 TCCGATCAACCTAAA CCGC TGG GCGG TGGCGGTGAACGCTA sodC_1 1538201 - 1538722 + | superoxide dismutase (Cu-Zn) EcSMS35_1553 1540735 - 1538723 - | fusaric acid resistance domain-containing protein TERM 2020 1538816 - 1538795 - G 73 -11.5 -2.6914 | opp_overlap 1538794 1538793, overlap 1538782 1538794 CAGCCGCCAGACAAT TGCCGCCAG CTCA CGGGCGGCA GGTTGATGATGACGG EcSMS35_1554 1541592 - 1540735 - | MFP family transporter TERM 2021 1540926 - 1540940 + g 73 -4.2 -4.79955 | opp_overlap 1540926 GACCGATACTGGAAA CGTGAC CCT GTAACG TTTTGTTATCACTAT TERM 2022 1541316 - 1541348 + g 72 -10.7 -3.0264 | gap 1 GGTCAGATTGCGCTT TCGCC-AGCTGAGC CTGTGC GTTCAGCTCGGCGA TCTTAAAGGGCGTTT EcSMS35_1555 1541831 - 1541595 - | hypothetical protein EcSMS35_1556 1541888 - 1542007 + | hypothetical protein EcSMS35_1557 1542032 - 1542466 + | transcriptional regulator SlyA TERM 2023 1542511 - 1542469 - T 72 -8.5 -3.63968 | gap 1, opp_overlap 1542473, overlap 1542461 1542473 GGCCAAAGGGTGAAA TGAAGGGGGCGTGTGGTCAG TAAC CTGACCACACGCAAACTT-A TTTAGCGCGGGGAAA TERM 2024 1542473 - 1542508 + T 93 -11.8 -3.90744 | opp_overlap 1542469 1542461 1542473 AAAGGGTGAAATGAA GGGGGCGTGTGGTCAG TAAC CTGACCACACGCAAAC TTATTTAGCGCGGGG TERM 2025 1542508 - 1542473 - T 88 -11.8 -3.5332 | opp_overlap 1542473, overlap 1542469 1542461 AAAGGGTGAAATGAA GGGGGCGTGTGGTCAG TAAC CTGACCACACGCAAAC TTATTTAGCGCGGGG slyB 1542980 - 1542513 - | outer membrane lipoprotein SlyB TERM 2026 1544237 - 1544199 - g 100 -16.8 -3.51924 | opp_overlap 1544213 CTGCCAGGCACAGAA GTCACCACCACCGATGCC GTT GGCATTAGTGGCGATGAC ATGGAAGCATTGGCT anmK 1543254 - 1544363 + | anhydro-N-acetylmuramic acid kinase EcSMS35_1560 1544461 - 1544790 + | putative lipoprotein TERM 2027 1544921 - 1544906 - g 72 -7.5 -3.93262 | overlap 1544899 CGTGAATACACCAAA GGCGG GTTACG CCGCC GCGATCTTCCCGCCG TERM 2028 1545101 - 1545080 - g 81 -5.9 -4.78107 | gap 1, overlap 1545084 CATTACGACGAAAAA GGCATGGTGT TTT ACACCA-ACC TCGGCAGCCGTAAAG TERM 2029 1545426 - 1545451 + G 73 -4 -4.83169 | gap 1 TTGAGTTCTGGCAGG GCGGTGA-GCA TCGCC TGCATGACCGC TTTTTGTACCAGCGT pdxH 1544849 - 1545505 + | pyridoxamine 5'-phosphate oxidase TERM 2030 1546526 - 1546509 - g 84 -4.1 -5.21506 | gap 1, overlap 1546511 1546519 1546520 1546522 AGAAGAAGATAAAAA CAGCGGTA AAG CACCGC-G CGCCCAGTATGTACT TERM 2031 1546525 - 1546511 - g 76 -7.8 -4.20977 | overlap 1546509 1546519 1546520 1546522 AAGAAGATAAAAACA GCGGTA AAG CACCGC GCGCCCAGTATGTAC tyrS 1545634 - 1546908 + | tyrosyl-tRNA synthetase TERM 2032 1546921 - 1546950 + F 95 -10.7 -4.82901 | opp_overlap 1546924, overlap 1546922 1546924 TAATGCATTAAGTGG AAAGGGGGAGTGA GAAA TCACTCCCCCTGG TTTTTATACAGGGAA TERM 2033 1546922 - 1546949 + F 100 -14.2 -3.49419 | opp_overlap 1546924, overlap 1546921 1546924 AATGCATTAAGTGGA AAGGGGGAGTGA GAAA TCACTCCCCCTG GTTTTTATACAGGGA TERM 2034 1546924 - 1546947 + F 100 -16.8 -3.31915 | opp_overlap 1546924, overlap 1546922 1546921 TGCATTAAGTGGAAA GGGGGAGTGA GAAA TCACTCCCCC TGGTTTTTATACAGG TERM 2035 1546947 - 1546924 - f 100 -16.8 -3.67976 | opp_overlap 1546922 1546921 1546924 TGCATTAAGTGGAAA GGGGGAGTGA GAAA TCACTCCCCC TGGTTTTTATACAGG pdxY 1546970 - 1547830 + | pyridoxal kinase gst 1548479 - 1547874 - | glutathione S-transferase TERM 2036 1548189 - 1548199 + g 70 -5.4 -4.36914 | GGCGATGTAATTCAG CCAT TCG ATGG TTTTATAGCGGGAAA TERM 2037 1548362 - 1548374 + g 84 -4.1 -5.28481 | opp_overlap 1548356 CAAAGTAATCGTCAC CGTTT TCG AGACG TTTTTTCATTAAATC TERM 2038 1548538 - 1548560 + r 100 -13.5 -3.30635 | opp_overlap 1548538 GCTGAACAAAAAAAA GCCGCTAAC GAAAA GTTAGCGGC TTGTAAAAGAGTTTC TERM 2039 1548560 - 1548538 - R 100 -13.5 -6.09888 | opp_overlap 1548538 GCTGAACAAAAAAAA GCCGCTAAC GAAAA GTTAGCGGC TTGTAAAAGAGTTTC tppB 1550086 - 1548584 - | tripeptide permease TppB TERM 2040 1549050 - 1549015 - G 70 -11.2 -2.7924 | gap 1, opp_overlap 1549048, overlap 1549010 1549008 CACCAGAACACATCA CCATGCCGATTGCAAAC TTG GTTGGCA-TCGGCAGGG TATCGCCCATCTTGT TERM 2041 1549639 - 1549655 + g 76 -3.5 -4.91511 | opp_overlap 1549627 ACATGGTGAATGCAC CGTCCAG ACG CGGGTCG TTTTTCTCATAGCAT TERM 2042 1550034 - 1550061 + g 74 -8.6 -3.90592 | gap 1, opp_overlap 1550021 1550018 1550040 1550049, overlap 1550027 1550035 1550045 AACGCCTTCGGTTGT TTGAAAGCGTTCA AAC TGA-CGCTTTCAG TTGGTTTTTGGTTTG TERM 2043 1550045 - 1550065 + g 76 -4 -4.99134 | opp_overlap 1550040 1550049, overlap 1550027 1550035 1550034 TTGTTTGAAAGCGTT CAAACTGA CGCTT TCAGTTGG TTTTTGGTTTGCAGT TERM 2044 1550670 - 1550689 + r 89 -8.6 -4.66987 | opp_overlap 1550670 1550669 AGAAAGGTTATGAAT GGGGTAAT CGGT GTTACCCC TTTTCTTCAGATGTC nth 1551331 - 1550696 - | endonuclease III rnfE 1552026 - 1551331 - | electron transport complex, RnfABCDGE type, E subunit TERM 2045 1551636 - 1551660 + g 74 -3.4 -5.00616 | opp_overlap 1551636, overlap 1551637 TACCAATTGAAAAGC CGTCCAGTGC CGAAA GCGCCGGACC TTTTTTGGCGGCGAA rnfG 1552650 - 1552030 - | electron transport complex, RnfABCDGE type, G subunit rnfD 1553712 - 1552654 - | electron transport complex, RnfABCDGE type, D subunit TERM 2046 1552831 - 1552812 - G 70 -6.4 -4.17048 | overlap 1552814 1552817 GCGCGCCGAAAATAA GACGACCA CGAT TGGTCGTA GAAGCGGTAACCGGG TERM 2047 1552829 - 1552814 - G 73 -9 -3.68435 | overlap 1552812 1552817 GCGCCGAAAATAAGA CGACCA CGAT TGGTCG TAGAAGCGGTAACCG TERM 2048 1553618 - 1553602 - G 79 -2.2 -5.27477 | opp_overlap 1553608, overlap 1553603 ACCCCAACCAAAAAA CCACAG TTGCG CTGCGA TTCCTGGCACGGCTG rnfC 1555743 - 1553713 - | electron transport complex, RnfABCDGE type, C subunit TERM 2049 1553774 - 1553787 + g 71 -9.5 -3.54424 | opp_overlap 1553771 ACGCGGGCAATAGCC GCGGC AACT GCCGC TTTGCGCGGATCAAC TERM 2050 1554794 - 1554767 - G 73 -11.4 -2.59191 | gap 1, overlap 1554766 1554785 1554786 1554788 GCAGAGGGGCAGAAT CCG-GCGTCATTC AAT AAATGACGCACGG GCGTCCCCAGCCGTG TERM 2051 1555230 - 1555244 + g 72 -8.6 -3.80142 | GCTCGCACTCAGCAG CGTTGA TAA TCAACG TTTCAATCTTATCTC TERM 2052 1555646 - 1555619 - G 100 -12.7 -4.4648 | overlap 1555621 AGTGGTATGACAAAA CGCTGCGCCAG TGGTAC CTGGCGCAGGG GCGTACCGTTGGACT TERM 2053 1555644 - 1555621 - G 84 -13.9 -2.56122 | overlap 1555619 TGGTATGACAAAACG CTGCGCCAG TGGTAC CTGGCGCAG GGGCGTACCGTTGGA TERM 2054 1555695 - 1555711 + g 87 -4.5 -5.28176 | overlap 1555660 GATGGATGCCGCCGT TGAAATC CCA GATTTTA TTTTTTCTGAATGCA rnfB 1556314 - 1555736 - | electron transport complex, RnfABCDGE type, B subunit rnfA 1556895 - 1556314 - | electron transport complex, RnfABCDGE type, A subunit EcSMS35_1573 1557412 - 1556972 - | hypothetical protein TERM 2055 1557374 - 1557355 - G 75 -7 -4.3014 | overlap 1557359 ACAGAGCGACTAAAA GCCAGGCC AATG GGCCAAGC AACCAGCCTCCAATA EcSMS35_1574 1557713 - 1557498 - | haemolysin expression modulating protein TERM 2056 1557965 - 1557943 - H 73 -6.3 -4.3208 | gap 1 TCCGACAAGTGAAAA CATGC-ACCC GGAC GGGCAGCATG TCGCTCTACAAGCGC EcSMS35_1575 1558354 - 1559394 + | oxidoreductase, NAD-binding TERM 2057 1559399 - 1559423 + T 100 -10 -5.1963 | opp_overlap 1559398 1559400, overlap 1559400 GCCTTGCGTGAAAAG AGGATGGTGC AATTA GCACCATCCA TTTTTGTTACTTCGC TERM 2058 1559422 - 1559400 - T 100 -13.5 -3.63744 | opp_overlap 1559400 1559399, overlap 1559398 CCTTGCGTGAAAAGA GGATGGTGC AATTA GCACCATCC ATTTTTGTTACTTCG TERM 2059 1559400 - 1559422 + T 100 -13.5 -3.70694 | opp_overlap 1559398 1559400, overlap 1559399 CCTTGCGTGAAAAGA GGATGGTGC AATTA GCACCATCC ATTTTTGTTACTTCG TERM 2060 1559450 - 1559462 + T 73 -4.7 -4.80882 | TCGCAGCGACTTTTT CTCGC AGT GCGCG TTTTTCCTCTGCGCT add 1560431 - 1559430 - | adenosine deaminase TERM 2061 1560154 - 1560174 + g 74 -11.1 -3.20387 | opp_overlap 1560153, overlap 1560153 CGCAGCTCGACATAG TGCAGGCCG TTA CGGGCTGCA TCTTCAATGTTTTCA TERM 2062 1560535 - 1560494 - R 89 -8.7 -4.652 | overlap 1560495 AAAGCAGGGTAAAAA TCCACGATTGCGCAACG ATTTTTTA CGTTGCGCAATTGGGGT TAACGAACAGCGCGG TERM 2063 1560534 - 1560495 - R 85 -12.2 -3.38036 | overlap 1560494 AAGCAGGGTAAAAAT CCACGATTGCGCAACG ATTTTTTA CGTTGCGCAATTGGGG TTAACGAACAGCGCG malY 1561707 - 1560535 - | maltose regulon modulator MalY malX 1563309 - 1561717 - | PTS system, maltose and glucose-specific IIBC component TERM 2064 1562942 - 1562952 + g 72 -6.8 -4.24342 | overlap 1562915 GCGGCGTCCGTGGTT GGCA GAA TGCC TTTATTGGTCAACCA malI 1563484 - 1564512 + | maltose regulon regulatory protein MalI TERM 2065 1564581 - 1564571 - f 87 -5.4 -5.37345 | opp_overlap 1564574 GTTAATGATAAAAAA TGTG GCA CACA GGCGGTGCCTTTTAT TERM 2066 1564574 - 1564590 + F 82 -5.1 -5.3104 | opp_overlap 1564571 AATGATAAAAAATGT GGCAC ACAGGCG GTGCC TTTTATTTTTACTGA EcSMS35_1580 1564624 - 1565391 + | short chain dehydrogenase/reductase family oxidoreductase TERM 2067 1565434 - 1565404 - f 75 -9.8 -3.456 | opp_overlap 1565405 TAATACACTAACGAA CCGGTAAACAGC CGTATGT GTTGTTTACCGG GATAGCGTGTGCAAC uidR 1565631 - 1566209 + | transcriptional regulator UidR TERM 2068 1566225 - 1566251 + F 86 -10.9 -3.87318 | gap 1 TCCTCTCTCTCTTTC CGCGGGCT-GGT GACA ACTGAGCCCGCG TTTCATATCGTAATT TERM 2069 1566537 - 1566523 - f 72 -8.6 -3.58726 | opp_overlap 1566522 GTTTCTCACAGATAA CTGTGT GCA ACACAG AATTGGTTAACTAAT TERM 2070 1566745 - 1566723 - g 72 -6.2 -4.30719 | opp_overlap 1566722 GCGCGTTACAAGAAA GCCGGGCA ATTGCTG TGCCGGGC AGTTTTAACGATCAG TERM 2071 1567814 - 1567801 - g 73 -3.8 -4.82901 | opp_overlap 1567801, overlap 1567802 TGCGCGTGACAAAAA CCAC CCAAGC GTGG TGATGTGGAGTATTG uidA 1566599 - 1568410 + | beta-glucuronidase UidA TERM 2072 1568861 - 1568827 - g 88 -12.1 -3.69395 | gap 1, opp_overlap 1568857, overlap 1568830 1568834 GCGATGACCCAACAA CCACAATCCCGCGCCC GTCT GGGCGCG-GCTCGCGG GATTGCCGCGTCATT TERM 2073 1568855 - 1568834 - g 81 -12.9 -2.76171 | overlap 1568827 1568830 CCCAACAACCACAAT CCCGCGCCC GTCT GGGCGCGGC TCGCGGGATTGCCGC uidB 1568407 - 1569780 + | glucuronide permease uidB uidC 1569837 - 1571084 + | membrane-associated protein UidC TERM 2074 1571115 - 1571092 - T 100 -13.9 -5.5604 | opp_overlap 1571092 TGAAGTAAGAAAAAA CGCCGGAGA GAAAAA TCTCCGGCG TTTTGGCTGTGAATT TERM 2075 1571092 - 1571115 + T 100 -13.9 -4.24606 | opp_overlap 1571092 TGAAGTAAGAAAAAA CGCCGGAGA GAAAAA TCTCCGGCG TTTTGGCTGTGAATT EcSMS35_1585 1572637 - 1571129 - | hypothetical protein TERM 2076 1572110 - 1572127 + g 73 -4 -4.86773 | overlap 1572108 1572112 ATTTAACTGGAACTC GCCGCC GCTAAA GGCGAC TTTTTCATCCTTTTG TERM 2077 1572680 - 1572660 - R 100 -12.6 -4.27483 | opp_overlap 1572658 1572657 1572674 ATCCATAAAATGAAA TCAGGCGG ACTGG CCGCCTGA AGGTGTTATAAGCCT manA 1573913 - 1572738 - | mannose-6-phosphate isomerase, class I TERM 2078 1574178 - 1574160 - g 74 -2.4 -5.08824 | TTTCCACTCAAAAAA GATGATAC TGA GTATTACC TGCTAACCAGCGAAC TERM 2079 1574260 - 1574288 + G 72 -7.4 -3.97947 | AAGCGTTAACTCTGT TGGCGCGTCAAG CGTTT CATGATGCGTCA TTTATGCTGCGTCCG TERM 2080 1574724 - 1574712 - g 74 -7.7 -4.11623 | TATCAGGAAACCAAA GCGTT ACT AACGC CGGGGAAACTGAAAA TERM 2081 1575138 - 1575123 - g 72 -4.7 -4.66163 | overlap 1575134 ATCTGGATCGAAAAA CTGGA ACATAA TCCAG GAAAATATATCCCGG fumA 1574112 - 1575758 + | fumarate hydratase TERM 2082 1575781 - 1575764 - f 71 -8.3 -3.48884 | opp_overlap 1575765, overlap 1575762 1575760 1575765 TGTGAAATAAACAGA GCCGCCC TTCG GGGCGGT TTTTTTACATGGCAC TERM 2083 1575780 - 1575765 - f 79 -11.8 -2.68607 | opp_overlap 1575765, overlap 1575764 1575762 1575760 GTGAAATAAACAGAG CCGCCC TTCG GGGCGG TTTTTTTACATGGCA TERM 2084 1575765 - 1575780 + F 100 -11.8 -5.47218 | opp_overlap 1575764 1575762 1575760 1575765 GTGAAATAAACAGAG CCGCCC TTCG GGGCGG TTTTTTTACATGGCA fumC 1575901 - 1577304 + | fumarate hydratase tus 1578242 - 1577301 - | DNA replication terminus site-binding protein rstB 1579607 - 1578306 - | sensor histidine kinase RstB TERM 2085 1578655 - 1578691 + g 73 -3.6 -4.87665 | ACGCGCTCCATTAAG CGCATATCCAACGCCG CATAA TGGCCTTGCATGAGCG TTTTTATCCGTACCG rstA 1580330 - 1579611 - | transcriptional regulatory protein RstA EcSMS35_1593 1580459 - 1580794 + | hypothetical protein EcSMS35_1592 1581513 - 1580791 - | short chain dehydrogenase/reductase family oxidoreductase TERM 2086 1580877 - 1580857 - G 76 -10.5 -3.34344 | opp_overlap 1580857, overlap 1580861 GCAGCTGGTAAGTAA GTAATCGAC CAG GTCGATCAC TTCTTTCTCGCCAGG TERM 2087 1580857 - 1580877 + g 77 -8.3 -4.06419 | opp_overlap 1580857 1580861 GCAGCTGGTAAGTAA GTAATCGAC CAG GTCGATCAC TTCTTTCTCGCCAGG TERM 2088 1581207 - 1581234 + g 73 -3.5 -4.85599 | gap 1, overlap 1581210 TCTGCATCATGCAAG CCA-GTACGTCG GTCAG TGATGTACCTGG TTTTTCTGCCATCCA TERM 2089 1581272 - 1581290 + g 75 -4.5 -4.81685 | opp_overlap 1581272, overlap 1581287 GCGTTATGCAAAATA GCACGCA GGCCA TGGGTGC TTTTTAGTACTTCAT arcD 1582932 - 1581550 - | arginine/ornithine antiporter TERM 2090 1582519 - 1582507 - G 73 -4.1 -4.77036 | GCGCAGGATCAAAAA GTGAA CAA TCCAC AATAAAGCCGATGCA TERM 2091 1583097 - 1583081 - R 85 -10.8 -3.81062 | opp_overlap 1583081, overlap 1583074 ACTAAAAATGCGAAA GGCGGC ATCAA GCCGCC TTATAGGAGTAACTG TERM 2092 1583081 - 1583097 + r 80 -10.8 -3.31461 | opp_overlap 1583081 1583074 ACTAAAAATGCGAAA GGCGGC ATCAA GCCGCC TTATAGGAGTAACTG ydgH 1584062 - 1583118 - | YdgH protein TERM 2093 1583152 - 1583187 + g 73 -12 -2.72855 | gap 1, overlap 1583142 CTGACGGTCAGGTTA TTACCACGTT-CCTGCC ACT GGCGGGTGATGTGGTAA TACTTAGCACCTTTC pntA 1584587 - 1586119 + | NAD(P) transhydrogenase, alpha subunit EcSMS35_1597 1586130 - 1587518 + | NAD(P) transhydrogenase, beta subunit TERM 2094 1587519 - 1587548 + T 70 -6.3 -4.18488 | overlap 1587521 1587522 CTGAAAGCTCTGTAA CCCTGACGGCCTC TGCG GAGGCCGTCACTC TTTGTTGAGATCGCT TERM 2095 1587521 - 1587546 + T 100 -13.3 -3.69068 | overlap 1587519 1587522 GAAAGCTCTGTAACC CTGACGGCCTC TGCG GAGGCCGTCAC TCTTTGTTGAGATCG TERM 2096 1587522 - 1587545 + T 100 -16.8 -2.80958 | overlap 1587521 1587519 AAAGCTCTGTAACCC TGACGGCCTC TGCG GAGGCCGTCA CTCTTTGTTGAGATC EcSMS35_1598 1588577 - 1587543 - | PerM family permease TERM 2097 1587708 - 1587693 - G 74 -3.2 -5.00765 | overlap 1587695 1587702 AATCAACGACAAAAA TACCAC CAAT GTGGAA AGCCCCAGCCCACGT TERM 2098 1588867 - 1588877 + H 72 -8.2 -3.91197 | overlap 1588866 AGGTGAGCAGCACTG GCGC AAC GCGC TTTAGTCCTTTCTCC mdtJ 1588989 - 1589354 + | multidrug resistance protein MdtJ mdtI 1589341 - 1589670 + | multidrug resistance protein MdtI TERM 2099 1589668 - 1589708 + T 85 -9.1 -4.40561 | gap 1, opp_overlap 1589675 1589677, overlap 1589668 1589677 ATGGTGAAACTTGCC TGATGAACACGCTGCCCG CACTGT CGGGCAGCGT-TTGAACA TTATTTTTGCGACAG TERM 2100 1589702 - 1589675 - T 86 -12.7 -3.14463 | opp_overlap 1589668 1589668 1589677, overlap 1589677 AACTTGCCTGATGAA CACGCTGCCCG CACTGT CGGGCAGCGTT TGAACATTATTTTTG TERM 2101 1589677 - 1589700 + T 100 -15.3 -3.65722 | opp_overlap 1589675 1589677, overlap 1589668 1589668 CTTGCCTGATGAACA CGCTGCCCG CACTGT CGGGCAGCG TTTGAACATTATTTT TERM 2102 1589700 - 1589677 - T 100 -15.3 -3.13403 | opp_overlap 1589677 1589668 1589668, overlap 1589675 CTTGCCTGATGAACA CGCTGCCCG CACTGT CGGGCAGCG TTTGAACATTATTTT EcSMS35_1601 1590530 - 1589709 - | S1A family peptidase TERM 2103 1590762 - 1590730 - R 71 -8.4 -3.53444 | opp_overlap 1590729 1590732, overlap 1590731 CTACCCTCCGCTAAA GGCGGTGCTAAACG TTAAC CGCTTAGCACCGTA ATTTTCAGGCGCGAG TERM 2104 1590761 - 1590731 - R 79 -11.9 -2.71924 | opp_overlap 1590729 1590732, overlap 1590730 TACCCTCCGCTAAAG GCGGTGCTAAACG TTAAC CGCTTAGCACCGT AATTTTCAGGCGCGA TERM 2105 1590732 - 1590760 + r 86 -13.2 -3.08032 | opp_overlap 1590731 1590730, overlap 1590729 ACCCTCCGCTAAAGG CGGTGCTAAACG TTAAC CGCTTAGCACCG TAATTTTCAGGCGCG EcSMS35_1602 1591078 - 1590806 - | acid shock repeat-containing protein TERM 2106 1590954 - 1590964 + g 72 -6.8 -4.17477 | overlap 1590937 1590934 GCCTGCGCTTTCTGG GCAG GTG CTGC TTTATGCTGTTTTTT EcSMS35_1603 1591190 - 1592398 + | IS10 transposase TERM 2107 1592871 - 1592836 - T 81 -12.1 -3.09516 | gap 2, opp_overlap 1592836, overlap 1592839 GGTTTGAGCAGGCAA TAAGTCCGGAC-G-GGT ATTT ACCTCAGTCCGGACTTA TTTTTTCAGGCGTGC TERM 2108 1592836 - 1592871 + T 100 -12.1 -5.02074 | gap 2, opp_overlap 1592836 1592839 GGTTTGAGCAGGCAA TAAGTCCGGAC-G-GGT ATTT ACCTCAGTCCGGACTTA TTTTTTCAGGCGTGC TERM 2109 1592868 - 1592839 - T 77 -9.4 -3.69395 | gap 2, opp_overlap 1592836, overlap 1592836 TTGAGCAGGCAATAA GTCCGGAC-G-GGT ATTT ACCTCAGTCCGGAC TTATTTTTTCAGGCG ynfM 1594130 - 1592877 - | major facilitator family transporter TERM 2110 1594294 - 1594319 + G 76 -11.1 -3.34398 | overlap 1594293 GCAGAAGAGCTGCAT TTCGGGCGCGC CGCT GCCCGCCTGAA TATTTCGCAACCGCC EcSMS35_1605 1594237 - 1595130 + | LysR family transcriptional regulator TERM 2111 1595527 - 1595553 + G 70 -4.4 -4.4773 | overlap 1595529 1595549 AAGCCTGGCACTATC TTTCTCTGCG CATTAGT CGCGGGGAGA TTTTCCTTGCTCTGC TERM 2112 1595822 - 1595787 - g 72 -6.8 -4.21908 | gap 1, opp_overlap 1595821, overlap 1595791 1595821 TACGAGGATGTAAAA GAGATGCCGCT-CGGCG AGG CGCTGGAGCAGCATACC GGCGTACCGGTTTAT TERM 2113 1595821 - 1595832 + G 70 -7.2 -4.0371 | opp_overlap 1595787 1595821 CGCTGGAGCAGCATA CCGG CGTA CCGG TTTATATCCAGCATG TERM 2114 1596382 - 1596395 + G 70 -5.3 -4.37092 | GTCAGCACATTAGCG TTGAG AGTA CTCAA TTTTCTAACCAGGGT mic 1595265 - 1596485 + | transcriptional regulator Mic bioD2 1596610 - 1597305 + | dethiobiotin synthase EcSMS35_1607 1598514 - 1597258 - | chloride channel (ClC) family protein TERM 2115 1597346 - 1597376 + g 77 -9.7 -3.64599 | opp_overlap 1597349, overlap 1597349 ACGCAGGCAATCAAT AAACCGGGGAGTA GCTGA TACTCCCCGGTCA TTTCACATATCATCA TERM 2116 1597373 - 1597349 - G 100 -15.8 -4.33621 | opp_overlap 1597346 1597349 CAGGCAATCAATAAA CCGGGGAGTA GCTGA TACTCCCCGG TCATTTCACATATCA TERM 2117 1597349 - 1597373 + g 95 -15.8 -2.93585 | opp_overlap 1597349, overlap 1597346 CAGGCAATCAATAAA CCGGGGAGTA GCTGA TACTCCCCGG TCATTTCACATATCA TERM 2118 1598655 - 1598641 - R 100 -4.2 -5.80248 | opp_overlap 1598641 TAAGAGATAAAAAAA CGTGAC ACT GTAACG TATTATTGCCGAATC dmsD 1599323 - 1598709 - | twin-arginine leader-binding protein DmsD TERM 2119 1598854 - 1598842 - G 72 -4.8 -4.70613 | AAAACGTCAAGAAAA CGTG TTGAC CACG GAAAAAGGTGCCATG TERM 2120 1599286 - 1599264 - G 95 -9.8 -4.65916 | overlap 1599278 TGGAGCGTAATAAAA CAGCGCGC CCAACAC GCGCGCCG CAACAGAAAAATTAT TERM 2121 1599359 - 1599340 - R 75 -9.2 -3.6106 | opp_overlap 1599340 1599339, overlap 1599341 CCTAACATCCTGAAA TGTGCGGG TTGC CCCGCACC AATTTGTTAACCTGC TERM 2122 1599358 - 1599341 - R 82 -12.7 -2.76315 | opp_overlap 1599340 1599339, overlap 1599340 CTAACATCCTGAAAT GTGCGGG TTGC CCCGCAC CAATTTGTTAACCTG dmsC2 1600220 - 1599366 - | anaerobic dimethyl sulfoxide reductase, C subunit TERM 2123 1599856 - 1599842 - G 78 -7.8 -4.3586 | TCATCCAGACGAAAA TGACGC CGA GCGCCA TGCTGACAAGTAACC TERM 2124 1600099 - 1600113 + g 72 -5.7 -4.56597 | opp_overlap 1600096 1600094, overlap 1600096 CCACGGACAATACGC TGACG GTCTG CGTCA TTTTTGGCGGCGAAC dmsB_1 1600839 - 1600222 - | dimethylsulfoxide reductase, B subunit TERM 2125 1601281 - 1601296 + r 83 -6.2 -5.15969 | TATATGCAGGAAGGG GATGAA TAAT TTCATC TTTTTTCAATTCCCA TERM 2126 1601402 - 1601434 + r 79 -2.8 -5.45652 | overlap 1601428 TGGATCTTCACGGAA TGCGCGGAA-AGCGAC GTA GT-GTTCTTCCGGGCA TTTTTTCTTAAAGAT TERM 2127 1601896 - 1601879 - R 74 -4.1 -4.93296 | opp_overlap 1601873 1601879 GTAGCACCATAAAAA CTTGATG GGGA CATCCAG TTTTTCTTTTCCACG TERM 2128 1601879 - 1601896 + r 83 -4.1 -5.45802 | opp_overlap 1601879, overlap 1601873 GTAGCACCATAAAAA CTTGATG GGGA CATCCAG TTTTTCTTTTCCACG TERM 2129 1602316 - 1602330 + r 77 -3.5 -5.1861 | GCGCGTTACGTGGTG CGTTG GCGGG CAGCG TTTTTTCATCGTAAC ynfE 1605759 - 1603333 - | anaerobic dimethyl sulfoxide reductase, A subunit YnfE TERM 2130 1603911 - 1603937 + g 91 -3.1 -5.54192 | gap 1 CGACAAAATGACCAT TGGG-ATCTTTA CGCT TATAGATACCCA TTTTTTTCAGTTCGT TERM 2131 1604731 - 1604744 + g 74 -5.9 -4.47328 | overlap 1604730 TTGCGAAGCCCACTG CGGCG TTTT CGCTG TTTTATCATCACCTT TERM 2132 1605941 - 1605919 - R 74 -10.6 -2.74144 | opp_overlap 1605919, overlap 1605918 GTTGTATGTTCAAAT CGCCGGAT GTGTCGT ATCCGGCG TTCAGTCGATAATGT TERM 2133 1605919 - 1605941 + r 81 -12 -3.08642 | opp_overlap 1605919 1605918 GTTGTATGTTCAAAT CGCCGGATGT GTC GTATCCGGCG TTCAGTCGATAATGT EcSMS35_1614 1606263 - 1605958 - | hypothetical protein EcSMS35_1615 1606335 - 1607081 + | hypothetical protein speG 1607644 - 1607084 - | diamine N-acetyltransferase EcSMS35_1617 1608020 - 1607679 - | hypothetical protein EcSMS35_1618 1608155 - 1608481 + | hypothetical protein TERM 2134 1608567 - 1608582 + F 100 -4.6 -5.67063 | TTGTCAACCATTCAC GGCGCA AATA TACGCC TTTTTTTGTGATCAC rspA 1608687 - 1609901 + | starvation-sensing protein RspA rspB 1609913 - 1610932 + | starvation sensing protein RspB ydfJ 1610990 - 1612357 + | inner membrane metabolite transport protein ydfJ TERM 2135 1612366 - 1612389 + GF 95 -9.6 -5.16841 | TCTTTAAATCCTCCA TCCCTTCTCT TACC GGAGAGGGGA TTTTTATTCATATAA EcSMS35_1622 1612320 - 1612436 + | hypothetical protein EcSMS35_1623 1612446 - 1613906 + | mannitol dehydrogenase family protein TERM 2136 1613935 - 1613912 - T 100 -11.8 -5.63103 | gap 1, overlap 1613916 CGTGAAGTAAAAAAA GCAATGCCGCC ATC GGCGGCATT-C ACACGCTTAGTTCAT TERM 2137 1613932 - 1613916 - T 100 -13.7 -4.07651 | overlap 1613912 AAGTAAAAAAAGCAA TGCCGCC ATC GGCGGCA TTCACACGCTTAGTT EcSMS35_1624 1614145 - 1613942 - | hypothetical protein TERM 2138 1614313 - 1614290 - R 100 -13.2 -4.67353 | overlap 1614278 TGACGGAGGGAAAAA CTCTCACCCC GGAT GGGATGAGAG GAAATGAATTACTCT EcSMS35_1625 1615008 - 1614322 - | GntR family transcriptional regulator TERM 2139 1615088 - 1615071 - R 80 -10.5 -3.8591 | TGTGACAAGCAATAA CCCGGCA GTTA CGCCGGG TATAAAAATTACTGA EcSMS35_1626 1615843 - 1615097 - | NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg dcp 1615980 - 1618025 + | peptidyl-dipeptidase Dcp TERM 2140 1618067 - 1618036 - f 74 -9.4 -3.31691 | opp_overlap 1618033 1618037, overlap 1618029 1618037 TATAAACACCACCAA TGGCTGGCCTGG ATTTATCG CCAGACCAGCCT CGTTATAGCAGTAAT TERM 2141 1618037 - 1618066 + F 74 -10.7 -2.83271 | opp_overlap 1618029 1618036 1618037, overlap 1618033 ATAAACACCACCAAT GGCTGGCCTGG ATTTATCG CCAGACCAGCC TCGTTATAGCAGTAA TERM 2142 1618066 - 1618037 - f 84 -12.9 -2.58292 | opp_overlap 1618037 1618033, overlap 1618029 1618036 ATAAACACCACCAAT GGCTGGCCTGG ATTTATCG CCAGACCAGCC TCGTTATAGCAGTAA TERM 2143 1618493 - 1618466 - g 76 -7.6 -4.2558 | overlap 1618469 CAGGGCGGATTAAAA CAGGATGCAGCG CCAC CGCCGCCTCATG CAATAGAAGATGGCT EcSMS35_1628 1618388 - 1618780 + | hypothetical protein EcSMS35_1629 1619035 - 1619925 + | diguanylate cyclase TERM 2144 1620043 - 1620060 + T 100 -10.5 -5.76949 | CCATGCAAGCATTCA CCGCCGG TTTA CTGGCGG TTTTTTTTCGCCGTC TERM 2145 1620119 - 1620083 - T 91 -10.2 -4.82901 | gap 1, opp_overlap 1620084, overlap 1620084 1620086 TCGCCGTCATAAAAA TCAGGCCCCTTG-TACA CAGT TGTAACAAGGGGCCGGT TAGGTGAGGGATTAT TERM 2146 1620084 - 1620118 + T 87 -13.7 -3.06133 | gap 1, opp_overlap 1620083 1620084 1620086 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAGT TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 2147 1620118 - 1620084 - T 100 -13.7 -3.49419 | gap 1, opp_overlap 1620084, overlap 1620083 1620086 CGCCGTCATAAAAAT CAGGCCCCTTG-TACA CAGT TGTAACAAGGGGCCGG TTAGGTGAGGGATTA TERM 2148 1620116 - 1620086 - T 100 -14.9 -3.31915 | gap 1, opp_overlap 1620084, overlap 1620084 1620083 CCGTCATAAAAATCA GGCCCCTTG-TACA CAGT TGTAACAAGGGGCC GGTTAGGTGAGGGAT TERM 2149 1620390 - 1620374 - T 70 -5.7 -4.40298 | overlap 1620375 ACTTAAATCAACAAA GCGCGGG CTG CCCCCAC GGTCTTGCACGAATT ydeE 1621553 - 1620366 - | major facilitator family transporter TERM 2150 1620964 - 1620976 + g 73 -9.1 -3.65351 | AAAACTTTCGGCGAC CAGGC TCT GCCTG TTTCCGTGGCGATGA TERM 2151 1622016 - 1622038 + G 84 -4 -5.23316 | overlap 1622009 CTGCTGGACTGGCTT CGCTGGTGTT ACA GGCACAGGCG TTTTTTACTATCGTG TERM 2152 1622050 - 1622062 + G 70 -6.9 -4.05788 | GGCGTTTTTTACTAT CGTGC TTG GCGCG TTTACTTTCGGGGAG TERM 2153 1622106 - 1622117 + G 77 -5.8 -4.63527 | opp_overlap 1622097 AACAATTGGCGGGGA TCGC CTTA GCGA TTTTTGGCGTACTGG eamA 1621748 - 1622647 + | drug/metabolite exporter family transporter TERM 2154 1622649 - 1622689 + T 73 -6.2 -4.36914 | gap 1, opp_overlap 1622649 1622650 1622654, overlap 1622650 AGGTTAGAGGCTAAA CCATACGCACAGAATG-TG ATGC CAGCACTCTGTGCGTCTGC TTTTATCGCGGGAAA TERM 2155 1622689 - 1622649 - T 72 -8.4 -3.63805 | gap 1, opp_overlap 1622649 1622650, overlap 1622650 1622654 AGGTTAGAGGCTAAA CCATACGCACAGAATG-TG ATGC CAGCACTCTGTGCGTCTGC TTTTATCGCGGGAAA TERM 2156 1622650 - 1622688 + T 72 -9.7 -3.21934 | gap 1, opp_overlap 1622649 1622650 1622654, overlap 1622649 GGTTAGAGGCTAAAC CATACGCACAGAATG-TG ATGC CAGCACTCTGTGCGTCTG CTTTTATCGCGGGAA TERM 2157 1622688 - 1622650 - T 79 -11.9 -2.77962 | gap 1, opp_overlap 1622650 1622649, overlap 1622649 1622654 GGTTAGAGGCTAAAC CATACGCACAGAATG-TG ATGC CAGCACTCTGTGCGTCTG CTTTTATCGCGGGAA TERM 2158 1622684 - 1622654 - T 79 -11.3 -3.01765 | gap 1, opp_overlap 1622650 1622649, overlap 1622650 1622649 AGAGGCTAAACCATA CGCACAGAATG-TG ATGC CAGCACTCTGTGCG TCTGCTTTTATCGCG EcSMS35_1632 1623390 - 1622692 - | GntR family transcriptional regulator EcSMS35_1633 1623589 - 1623900 + | PTS system lactose/cellobiose family IIB subunit TERM 2159 1624588 - 1624598 + G 82 -2.6 -5.32882 | GTTCATTTAAAGTTT TATT GCC AATA TTTTTTGTCATGGTG EcSMS35_1634 1624014 - 1625336 + | PTS system lactose/cellobiose family IIC subunit EcSMS35_1635 1625364 - 1625675 + | PTS system lactose/cellobiose-specific family IIA subunit TERM 2160 1625679 - 1625706 + F 83 -10.7 -3.68302 | CTCCATGCCTGATTT TTTCCTCCAGT GCGATA GCTGGAGGAAA TTATTACACTCTTAA bglH 1625731 - 1627404 + | glucoside specific outer membrane porin BglH TERM 2161 1628075 - 1628054 - g 85 -10.3 -4.1711 | opp_overlap 1628050, overlap 1628057 ATGAGCGCGAACAAA TAATGTACC AGGC GGTACATTA CGAGTTAGTTGCCAG TERM 2162 1628072 - 1628057 - g 76 -7.6 -4.20768 | opp_overlap 1628050, overlap 1628054 AGCGCGAACAAATAA TGTACC AGGC GGTACA TTACGAGTTAGTTGC EcSMS35_1637 1627429 - 1628868 + | putative 6-phospho-beta-glucosidase BglA marB 1629143 - 1628925 - | multiple antibiotic resistance protein MarB TERM 2163 1629039 - 1629006 - G 77 -8.9 -4.08485 | gap 1, overlap 1629007 GTGATTTAAATCAAA CGGTGGTTGTTCCTGC GAT GGGGGAACAACCAC-G ACATTGGCACAGGAA marA 1629558 - 1629175 - | multiple antibiotic resistance protein MarA TERM 2164 1629220 - 1629208 - G 72 -4.7 -4.68424 | TAATGGATGTAAAAA GCGCG ATT CGCCC TGCATATTGGTCATC marR 1630013 - 1629579 - | multiple antibiotic resistance protein MarR marC 1630225 - 1630890 + | multiple antibiotic resistance protein MarC TERM 2165 1630895 - 1630908 + TF 77 -9.5 -3.6707 | opp_overlap 1630895 CGTACCACTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT TERM 2166 1630908 - 1630895 - Tf 100 -9.5 -5.1861 | opp_overlap 1630895 CGTACCACTAAAAAA GGCCC GAAT GGGCC TTTCAACTATTGCGT sotB 1632105 - 1630915 - | sugar efflux transporter SotB EcSMS35_1643 1632023 - 1632145 + | hypothetical protein TERM 2167 1632205 - 1632238 + G 70 -11.2 -2.73364 | gap 1 GATCGCGTTTTCCGT TTCTCTGACGC-TGA TTCTT TCACGCGTCAGAGAG TCGTTCACATCACGG EcSMS35_1645 1632182 - 1632301 + | hypothetical protein EcSMS35_1644 1633370 - 1632255 - | hypothetical protein TERM 2168 1632935 - 1632924 - G 83 -5.8 -4.97405 | ATTCAGAAAAAGAAA GAGC ACAC GCTC GACGCCGGTCTGAAA EcSMS35_1646 1634329 - 1633448 - | LysR family transcriptional regulator TERM 2169 1634023 - 1634037 + g 82 -11.4 -3.53012 | GCGTGACCGGAATGC GCACCG CAG CGGTGC TTTCCAGCGAACCAA TERM 2170 1635418 - 1635406 - g 86 -9.1 -4.3898 | opp_overlap 1635410 1635411 ATCAGGTGGAGAAAA CCCTG GCG CAGGG TGCGCGTTTGTTACT EcSMS35_1647 1634430 - 1635818 + | aldehyde dehydrogenase (NAD) family protein TERM 2171 1635867 - 1635843 - f 75 -10.8 -2.87931 | gap 1 TTCAGCTCTGATATA CTCGCAGGTCT TTTC AGACCTGCG-G TCCAGGAGTAGAAAG glsA2 1635882 - 1636808 + | glutaminase EcSMS35_1649 1636808 - 1637167 + | hypothetical protein TERM 2172 1637365 - 1637375 + G 80 -5.4 -4.91109 | opp_overlap 1637365 TCATCTGCTACGTAA TAGC ATC GCTA TTTTTGTGCTAACCA TERM 2173 1638023 - 1638060 + G 89 -14.3 -3.14404 | ACATGTCTGTTGACC TTTGTCACCGGTGCGGT GGAA ATCGTACTGGTGGCAAA TTCGGTGATTGATAT EcSMS35_1650 1637306 - 1638724 + | diguanylate cyclase uxaB 1638952 - 1640403 + | tagaturonate reductase TERM 2174 1640413 - 1640428 + F 89 -10.4 -4.58585 | TGCTAATACTCTGAA CCCGGT TTCG ACCGGG TTTCTTATTTCACTA TERM 2175 1640782 - 1640795 + G 79 -2.3 -5.28166 | GTTCAGCATTCTCGG TGTCG CCAT CGCCA TTTTTCTTGGTTTTC EcSMS35_1652 1640600 - 1641514 + | hypothetical protein tam 1642276 - 1641518 - | trans-aconitate 2-methyltransferase lsrG 1642623 - 1642333 - | lsrG protein lsrF 1643522 - 1642647 - | lsrF protein lsrB 1644571 - 1643549 - | autoinducer-2 ABC transporter, periplasmic autoinducer-2-binding protein LsrB lsrD 1645575 - 1644583 - | autoinducer-2 ABC transporter, permease protein LsrD TERM 2176 1644770 - 1644759 - G 81 -7.2 -4.71828 | ATCCCACTAATAAAA CCGC AATG GCGG TGCCGATAATGGAAC TERM 2177 1645435 - 1645389 - G 83 -10.3 -4.14598 | gap 1, overlap 1645391 TCGAACCAAACGAAA TATCGATCCCACCACTGACAAT CACC ATCGTCAGCGGTAGGG-CGACA ATGCCAATGCAGATA TERM 2178 1645433 - 1645391 - G 81 -10.7 -3.66148 | gap 1, overlap 1645389 GAACCAAACGAAATA TCGATCCCACCACTGACAAT CACC ATCGTCAGCGGTAGGG-CGA CAATGCCAATGCAGA TERM 2179 1645578 - 1645589 + r 71 -2.2 -5.08824 | gap 1, opp_overlap 1645571, overlap 1645586 AGCGAATACGCATTA CGCGG CCT CC-CG TTTTTTACCTGACGA lsrC 1646603 - 1645575 - | autoinducer-2 ABC transporter, permease protein LsrC TERM 2180 1646065 - 1646050 - G 79 -4.6 -4.96848 | opp_overlap 1646048 1646050, overlap 1646052 1646061 1646062 CCCGTGACATAAAAA CTGCGT CCAA ACGCCG TCTTTGCCAGCAGCC lsrA 1648132 - 1646597 - | autoinducer-2 ABC transporter, ATP-binding protein LsrA TERM 2181 1646793 - 1646761 - G 85 -12 -3.58365 | opp_overlap 1646775 GATCAGAGGAGATAA GCAGCACAGCCACA TTCTG TGCGGCGATGCTGC GCAACAGTTGGTAGA TERM 2182 1647760 - 1647740 - G 79 -10.4 -3.85092 | ACTATGCAGATCAAA CTGGCAGC CCAGC GCCGCCAG CAAGTTATTCATTTT lsrR 1648381 - 1649334 + | transcriptional repressor LsrR TERM 2183 1650097 - 1650083 - g 70 -5.6 -4.41348 | CTCCTGTCAAAGAAA CCGGCA CAT TGCTGG GCGTGGTAAGTTCAC TERM 2184 1650639 - 1650653 + G 70 -4.2 -4.66953 | overlap 1650632 1650640 ATCAGCGTGTAACTT GCAGCA AAT TGCTGA TTTTTCGAATATTCA lsrK 1649413 - 1651005 + | autoinducer-2 kinase TERM 2185 1651011 - 1651044 + F 78 -6.1 -4.72333 | gap 1, overlap 1651012 1651015 TGGGTTATAGTTTCA TTGACAGCCAC-ATCA TGA TGACCGTGGCTGTTAG TTTTTGAGTATAGTT TERM 2186 1655892 - 1655878 - g 80 -5.7 -4.94902 | GAATGACGAGAAAAA CTGGT ATCTG ACCAG TAAATGGGACGGCGT EcSMS35_1662 1651535 - 1656415 + | pertactin family protein TERM 2187 1656481 - 1656505 + F 71 -9.3 -3.36452 | opp_overlap 1656473 1656481 TGGTAAACCGTATAA GCCGCATGT CGAAGAT GCATGCGGC TTAATATTGCCGACT EcSMS35_1663 1656724 - 1656846 + | hypothetical protein TERM 2188 1657523 - 1657537 + F 77 -7.2 -4.37886 | AGGGCAATATCCCAT CAAGAA TGA TTCTTG TTTTATAAGCAATAA EcSMS35_1664 1657614 - 1658177 + | fimbrial protein TERM 2189 1658248 - 1658217 - f 79 -9.4 -3.85165 | gap 1, overlap 1658219 CATCTGAAATTGAAA CAGGGTGTGTGTGGC ATG GCTACGCACACCC-G AGCAATTCACCAATG TERM 2190 1658247 - 1658219 - f 100 -13.1 -3.50832 | overlap 1658217 TCTGAAATTGAAACA GGGTGTGTGTGGC ATG GCTACGCACACCC GAGCAATTCACCAAT EcSMS35_1665 1658540 - 1659250 + | periplasmic pilus chaperone family protein EcSMS35_1666 1659328 - 1661943 + | fimbrial usher family protein EcSMS35_1667 1661957 - 1662487 + | protein FimF-like protein EcSMS35_1668 1663892 - 1662987 - | IS2 transposase orfB EcSMS35_1669 1662500 - 1663147 + | protein FimG-like protein EcSMS35_1670 1664260 - 1663850 - | IS2 transposase orfA TERM 2191 1665202 - 1665165 - g 71 -3.4 -4.74103 | gap 1 TGCGTAATGGAAAAA TACTGGCTAC-GGGAGA AAACG TCTCCCTGGGGACAGTA AATAAAAGCAAAGTA EcSMS35_1671 1664399 - 1665313 + | protein FimH-like protein TERM 2192 1665560 - 1665541 - f 71 -5 -4.58297 | opp_overlap 1665543, overlap 1665543 GATTAAAAATAGAAA GAGAGTAG TCCC CTACTCTT ATATATCCATATTGA TERM 2193 1665558 - 1665543 - f 70 -7.6 -3.87576 | opp_overlap 1665543, overlap 1665541 TTAAAAATAGAAAGA GAGTAG TCCC CTACTC TTATATATCCATATT EcSMS35_1672 1665652 - 1667931 + | molybdopterin oxidoreductase, alpha subunit TERM 2194 1667945 - 1667975 + F 90 -12.8 -3.28537 | opp_overlap 1667970 AATTCGCCTCCTCAT TTCTTCTGCTGT CATCCGC ACAGCAGAAGAA TTCCTCATTGACTAT EcSMS35_1673 1668179 - 1668376 + | hypothetical protein EcSMS35_1674 1668451 - 1669212 + | AraC family transcriptional regulator TERM 2195 1669281 - 1669261 - f 71 -9.7 -3.0449 | opp_overlap 1669260 1669259, overlap 1669260 ACGTAAGAATTAAAT GGGGCAG CCATTTC CTGCCCC GCGTTGTTTTTAGGC EcSMS35_1675 1669676 - 1671295 + | sulfatase TERM 2196 1671307 - 1671328 + F 87 -11.5 -3.61715 | opp_overlap 1671301, overlap 1671308 ATAACTAAACCTTCA TGCGGCGGA TTTT TCCGCCGCC TTATTGAGCGAGATA TERM 2197 1671308 - 1671327 + F 89 -15 -2.76815 | opp_overlap 1671301, overlap 1671307 TAACTAAACCTTCAT GCGGCGGA TTTT TCCGCCGC CTTATTGAGCGAGAT EcSMS35_1676 1671347 - 1672504 + | radical SAM domain-containing protein TERM 2198 1672558 - 1672583 + F 82 -10.5 -3.95424 | opp_overlap 1672557 1672556 1672560 ATGACCTTAACAAGG CACCCGACA TAAATTCC TGTCGGGTG TTTCGTCTTCATCAT TERM 2199 1673024 - 1673046 + G 76 -7.6 -4.2586 | GGCAGCTTGTCCTTT GGTTCCCTGC CCT GCTGGGGATC TTTGTATTAATATCC EcSMS35_1677 1672795 - 1674480 + | inner membrane ABC transporter ATP-binding protein TERM 2200 1676269 - 1676253 - g 78 -7.9 -4.39989 | ATCAAATCAGTAAAA GCAGTCG TAC CGACAGC GCGACTAAAACCACC EcSMS35_1678 1674518 - 1676890 + | TonB-dependent receptor TERM 2201 1677482 - 1677460 - g 91 -11.2 -4.21908 | opp_overlap 1677473 1677474, overlap 1677461 CATCAGGATGCAAAA TGGCGCACCT CTC AGGCGCGCCG CCCTTTCCTGCTGGC TERM 2202 1677481 - 1677461 - g 93 -14.7 -3.12663 | opp_overlap 1677473 1677474, overlap 1677460 ATCAGGATGCAAAAT GGCGCACCT CTC AGGCGCGCC GCCCTTTCCTGCTGG TERM 2203 1678902 - 1678883 - g 74 -7.8 -4.08767 | overlap 1678869 1678868 TTCAGGCGTTGAAAA CGCTCGAC CAGC GTCCAGCG GAGAAATTCGCCCAG TERM 2204 1679220 - 1679199 - g 90 -6.7 -5.093 | gap 1, opp_overlap 1679203, overlap 1679203 TGTAAAAGAACAAAA TGA-ACCTGT GGC ACAGGTTTCA CAGTGGAAGCGTTAT TERM 2205 1679215 - 1679203 - g 72 -7.7 -3.89307 | opp_overlap 1679203, overlap 1679199 AAAGAACAAAATGAA CCTGT GGC ACAGG TTTCACAGTGGAAGC pqqL 1676947 - 1679730 + | M16B family peptidase TERM 2206 1679767 - 1679731 - f 80 -8.7 -4.18506 | opp_overlap 1679736 1679737 1679754, overlap 1679734 1679737 TTATTGCCAAAATAA TAACAGCCCCGTCAACA CCT CGTTGGCGGGGATTTTA GCAATATTCGCCATT TERM 2207 1679764 - 1679734 - f 70 -6 -4.20868 | opp_overlap 1679736 1679737 1679754, overlap 1679731 1679737 TTGCCAAAATAATAA CAGCCCCGTCAACA CCT CGTTGGCGGGGATT TTAGCAATATTCGCC TERM 2208 1679736 - 1679762 + F 82 -10.1 -4.14472 | opp_overlap 1679734 1679731 1679737, overlap 1679737 1679754 GCCAAAATAATAACA GCCCCGTCAAC ACCTC GTTGGCGGGGA TTTTAGCAATATTCG TERM 2209 1679737 - 1679761 + F 87 -13.6 -3.08201 | opp_overlap 1679734 1679731 1679737, overlap 1679736 1679754 CCAAAATAATAACAG CCCCGTCAAC ACCTC GTTGGCGGGG ATTTTAGCAATATTC TERM 2210 1679761 - 1679737 - f 79 -12.1 -2.80636 | opp_overlap 1679737 1679736 1679754, overlap 1679734 1679731 CCAAAATAATAACAG CCCCGTCAACA CCT CGTTGGCGGGG ATTTTAGCAATATTC TERM 2211 1679754 - 1679780 + F 74 -3.7 -5.01497 | opp_overlap 1679737 1679734 1679731, overlap 1679737 1679736 CCGTCAACACCTCGT TGGCGGGGATT TTAGC AATATTCGCCA TTTTTATGTAATAAT gadA 1680092 - 1681492 + | glutamate decarboxylase GadA TERM 2212 1681511 - 1681540 + F 83 -10.8 -3.57387 | opp_overlap 1681526, overlap 1681512 CGTTTAACGGTAACG GTGTCCCGAAAC ACACCC GTTTCGGGACAA TTTCCAAAGTCTGTT TERM 2213 1681512 - 1681539 + F 87 -14.3 -2.7395 | opp_overlap 1681526, overlap 1681511 GTTTAACGGTAACGG TGTCCCGAAAC ACACCC GTTTCGGGACA ATTTCCAAAGTCTGT TERM 2214 1681606 - 1681578 - f 77 -7.6 -4.30416 | overlap 1681580 ATTAGCAACGGAAAA TATTGTTCTGAA TACGC TTCAGAACAAAA CAGGTGCGGTTCCGA TERM 2215 1681604 - 1681580 - f 80 -10.2 -3.75051 | overlap 1681578 TAGCAACGGAAAATA TTGTTCTGAA TACGC TTCAGAACAA AACAGGTGCGGTTCC TERM 2216 1681781 - 1681798 + G 75 -5.5 -4.67256 | TTTCATTAGTCTTCT TCCTGCT ATTA GGCGGGA TTTTATGGTTTATTC TERM 2217 1682630 - 1682616 - g 73 -4.2 -4.8667 | opp_overlap 1682618, overlap 1682617 1682618 CACAGCGCAGAAAAA CCTGCT GCC AGCAGC ATTCGCTAAAATGAA gadC 1681648 - 1683183 + | glutamate:gamma aminobutyrate antiporter TERM 2218 1683209 - 1683231 + F 100 -13.5 -4.81685 | opp_overlap 1683209 ATGGTTATAAGACAA GGGAGCGAT AATTC ATCGCTCCC TTTTTCGTGCTTGCT TERM 2219 1683231 - 1683209 - f 100 -14.2 -3.75378 | opp_overlap 1683209 ATGGTTATAAGACAA GGGAGCGATA ATT CATCGCTCCC TTTTTCGTGCTTGCT EcSMS35_1682 1683419 - 1684633 + | putative lipoprotein TERM 2220 1684950 - 1684960 + F 72 -6.8 -4.27062 | GCAGTTAGTCGATCT CGCA CGT TGCG TTTCGTTTTGATTCC TERM 2221 1685077 - 1685036 - g 70 -5.9 -4.20834 | gap 1, opp_overlap 1685038, overlap 1685038 TTTAAAAGAATGAAA GATGAGTGGACCGGGCTTGT CGA ACAAGCA-GATCCGCTCATT CGTGCTAAAGCCGCG EcSMS35_1683 1685009 - 1686391 + | diguanylate cyclase TERM 2222 1686439 - 1686452 + G 90 -4.5 -5.40072 | opp_overlap 1686439 AACCGATGCGGATAA TGCCG CCGA TGGCA TTTTTTTCCCCGCCC TERM 2223 1688589 - 1688571 - g 70 -4.6 -4.5852 | opp_overlap 1688571, overlap 1688573 1688580 TAACGGAAATCAAAA TTGACAAA AGT TTTGTCGA TCGTTGTCTGACCGA dos 1686392 - 1688815 + | heme-regulated cyclic AMP phosphodiesterase TERM 2224 1688829 - 1688842 + F 93 -9.5 -5.09259 | GACATTTTCCTCTCG CCCGC ACTC GCGGG TTTTCTTTTAACGTG ddpX 1689073 - 1689654 + | D-alanyl-D-alanine dipeptidase EcSMS35_1686 1689668 - 1691218 + | putative ABC transporter periplasmic-binding protein yddS precursor TERM 2225 1691924 - 1691967 + G 71 -3 -4.73682 | gap 1, overlap 1691928 1691930 ATTGAGTGAAGACTA CATTCGTACCGCCCGGGCCAG CGG CTTGCCCGGCTGGTAT-ATCG TTTTATGTTATGCGC TERM 2226 1691930 - 1691962 + G 89 -14.1 -3.18381 | overlap 1691928 1691924 TGAAGACTACATTCG TACCGCCCGGGCCAG CGG CTTGCCCGGCTGGTA TATCGTTTTATGTTA yddR 1691220 - 1692242 + | inner membrane ABC transporter permease protein yddR TERM 2227 1692692 - 1692702 + G 75 -6.8 -4.41616 | GCACTGGCAGCCGCT CTCG GGC CGAG TTTGTTTAACGCCAT yddQ 1692239 - 1693135 + | inner membrane ABC transporter permease protein yddQ EcSMS35_1689 1693132 - 1694118 + | ABC transporter, ATP-binding protein EcSMS35_1690 1694111 - 1695037 + | putative ABC transport system ATP-binding protein TERM 2228 1695077 - 1695050 - T 87 -11.3 -3.67558 | overlap 1695062 TAGAGACGCTAACAA CGCATCAGGCA ATCACG CGCCTGACGCG TCATACGGCAACGCT osmC 1695443 - 1695093 - | peroxiredoxin OsmC EcSMS35_1692 1695701 - 1695561 - | hypothetical protein EcSMS35_1693 1695868 - 1696083 + | protein bdm EcSMS35_1694 1696185 - 1696322 + | 30S ribosomal subunit S24 TERM 2229 1696376 - 1696355 - f 100 -13.1 -3.82031 | opp_overlap 1696355 TCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTGTTTTTATCT TERM 2230 1696355 - 1696376 + F 100 -13.1 -5.71295 | opp_overlap 1696355 TCAATGACGATTAAA CACCATTGC CTGC GCAATGGTG TTTTTGTTTTTATCT TERM 2231 1697262 - 1697234 - g 100 -6.8 -5.60993 | gap 1, overlap 1697219 CTTCGCACAAAAAAA TGCGAT-GCCGTT ACTT AACCGCTATCGCA ATGAAATTTGTTCTT sfcA 1696479 - 1698176 + | malate dehydrogenase (oxaloacetate-decarboxylating) TERM 2232 1698182 - 1698207 + F 74 -11.1 -2.83071 | opp_overlap 1698177, overlap 1698181 CTCCATCTAAGCCTG CGCCCGGTAGT GAAG GCTACCGGGCA ATTTCCCTCTCCCTT EcSMS35_1696 1698310 - 1699320 + | zinc-binding dehydrogenase family oxidoreductase EcSMS35_1697 1699466 - 1699750 + | addiction module antidote protein TERM 2233 1699756 - 1699775 + T 95 -12.2 -4.19506 | opp_overlap 1699756 TACGCAATAAAAAAA TGGCGCTT CTTA AAGCGCCA TTTTCAGCTTAAAGT TERM 2234 1699775 - 1699756 - T 100 -12.2 -5.8187 | opp_overlap 1699756 TACGCAATAAAAAAA TGGCGCTT CTTA AAGCGCCA TTTTCAGCTTAAAGT fdnI 1700454 - 1699801 - | formate dehydrogenase, gamma subunit fdnH 1701331 - 1700447 - | formate dehydrogenase, nitrate-inducible, iron-sulfur subunit TERM 2235 1700545 - 1700557 + g 71 -9.1 -3.5394 | opp_overlap 1700540 1700544, overlap 1700554 TGGCGATAAAGCCAG CCGCT GCC AGCGG TTTCAACGCGCCTTT fdnG 1704391 - 1701344 - | formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing TERM 2236 1702833 - 1702861 + g 76 -9 -3.73775 | gap 1 TAGCCCCAGTTGTTC TCTTTCTGC-GCG GCAT CGCCGTAGAAAGA TTTCATCAGGCTAAC TERM 2237 1703617 - 1703645 + g 90 -7.6 -4.75174 | gap 1 GCGTAAAACGGGGAT CGACAACGAT-CA AGGT TGCATCGTTGTTG TTTTTCGCTTCCATC EcSMS35_1701 1704623 - 1705504 + | hypothetical protein TERM 2238 1705510 - 1705532 + F 72 -9.8 -3.1706 | opp_overlap 1705510 1705507 1705511 TCGTGGCTAAAATAA TTGTCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT EcSMS35_1702 1705762 - 1706862 + | porin family protein TERM 2239 1706876 - 1706895 + F 100 -10.7 -5.00138 | AACATCCTCTCCTGA CCAGCCC TTCTCT GGGCTGG TTTTTGATTTAAGTG EcSMS35_1703 1707032 - 1708291 + | hypothetical protein TERM 2240 1709243 - 1709229 - g 71 -2.2 -4.91573 | opp_overlap 1709230, overlap 1709230 AAAACAGAGCAAAAA CTTAAA TTT TTTAAA TGTTTCTGGGAAGAA EcSMS35_1704 1708354 - 1709610 + | hypothetical protein TERM 2241 1710452 - 1710478 + G 71 -3.1 -4.84761 | gap 2, overlap 1710457 ACTTAGGTGTAAGTG TGATGCAGCTGGT TGC ACC-GCTG-GTCA TTTTTGTACCCGTAT TERM 2242 1710872 - 1710889 + G 71 -2.7 -4.86033 | TCGGCGGCGTGCGGG TGACGTT GATC AACTTCA TTTTTATGGCGATTT TERM 2243 1710928 - 1710950 + G 72 -8.5 -3.79021 | gap 1 CTGCTGTTCCTTACC TTACCGG-GC ACAG GCTCCGGTAA TTTCATCGCATTTTA TERM 2244 1711150 - 1711164 + G 85 -2.7 -5.4505 | TTTATCTCAGCCATT GGCGC AGTGG GCGGC TTTTTTATTCCGCAG narU 1709920 - 1711308 + | nitrite extrusion protein 2 TERM 2245 1711689 - 1711670 - g 76 -10.6 -3.32769 | overlap 1711663 CTGCCAAATCACGAA CCTCGCGG CTGC CCGCGTGG CGCAAGTTACTCCTG TERM 2246 1712320 - 1712300 - g 85 -11.9 -3.64703 | opp_overlap 1712319, overlap 1712303 TGGCTGGCACCGAAA CAAGGCACT GAT AGTGCCCTG GCAATGGCAATGGGC TERM 2247 1712317 - 1712303 - g 81 -10 -3.96216 | overlap 1712300 CTGGCACCGAAACAA GGCACT GAT AGTGCC CTGGCAATGGCAATG TERM 2248 1712626 - 1712600 - g 75 -4.5 -4.82901 | gap 1 CGCTGGGGAGAAAAA GGCAAATGGAAT CTGG AATCCATT-GCC GCCGGTACGGAAACC TERM 2249 1713801 - 1713814 + G 72 -6.7 -4.25458 | ACGATATGAACACCT CGGAT ATGC ATCCG TTTATTCATCCGCTT narZ 1711403 - 1715143 + | nitrate reductase 2, alpha subunit TERM 2250 1715237 - 1715223 - g 75 -5.6 -4.59773 | GGTGACCTGTAAAAA CGTCTG GAC CGGACG CGAAGGCATGGAGTA narY 1715140 - 1716684 + | nitrate reductase 2, beta subunit narW 1716684 - 1717379 + | nitrate reductase molybdenum cofactor assembly chaperone 2 TERM 2251 1717747 - 1717772 + G 78 -5.4 -4.79174 | overlap 1717745 CAGGGCGACGTCTTC TGGTGCGGAT ATCCTG ATCCTCGCCA TTTTGTTAATTCAGT narV 1717376 - 1718056 + | respiratory nitrate reductase 2, gamma subunit EcSMS35_1710 1718136 - 1719029 + | PhzF family phenazine biosynthesis protein TERM 2252 1719112 - 1719081 - T 74 -10.8 -2.57092 | opp_overlap 1719060 1719081, overlap 1719068 1719077 AACCGGACTAATGTA TGCCGGATTAGGCA TTTA CGCCACATCCGGCA ACCTGACATAAATTA EcSMS35_1711 1719970 - 1719125 - | N-hydroxyarylamine O-acetyltransferase EcSMS35_1712 1720145 - 1720714 + | flavin reductase domain-containing protein EcSMS35_1713 1720945 - 1720718 - | tautomerase enzyme family protein TERM 2253 1720878 - 1720891 + g 100 -8.1 -5.31855 | ACGTCGGTAATATCT GCAGC AAGT GCTGC TTTTTGTTGTTCGTC TERM 2254 1721763 - 1721751 - g 82 -3.3 -5.25803 | opp_overlap 1721751 AATCGCGACAAAAAA CCGGT AGT AGCGG TTATCTACACACACA EcSMS35_1714 1721250 - 1723226 + | metallo-beta-lactamase family protein TERM 2255 1723241 - 1723257 + G 100 -13.7 -5.26875 | opp_overlap 1723232 AATTTACTGCATACC GGGCAGG TAT CCTGCCC TTTTTTGGTTAAAAA TERM 2256 1723338 - 1723310 - g 70 -6 -4.20084 | gap 1 ATCACTCATGGAAAA CCCGCCGCGA-TA TGGT TATTCGCGGCATG ACGATTAGTTTGCCA EcSMS35_1715 1723202 - 1723339 + | hypothetical protein TERM 2257 1723364 - 1723390 + G 70 -6.1 -4.2558 | gap 1 TGCCATGGTTTGCTT TTATCAATGTCA GTTT TG-CATTGATAA TTTTGCTGCGCCGTG TERM 2258 1724115 - 1724143 + G 70 -3.9 -4.7254 | overlap 1724116 GGATGTTGTTGTCCG TTATGGTGGCGAA GAG TTTGTCATCATAC TTTTTAATGCAACAT EcSMS35_1716 1723321 - 1724370 + | diguanylate cyclase EcSMS35_1717 1724988 - 1724371 - | hypothetical protein TERM 2259 1726123 - 1726133 + G 74 -3.2 -4.9792 | AGGCGGGGCAAAGTC CGTT CGT GACG TTTTTCTCTAAACTG ansP 1725255 - 1726754 + | L-asparagine permease TERM 2260 1726785 - 1726763 - T 100 -14.9 -4.19953 | opp_overlap 1726756 GAGTTAATTGCAAAA TTGCCCGGC TACGT GCCGGGCAA ATTCAAATTACTGAC EcSMS35_1719 1727928 - 1726867 - | hypothetical protein TERM 2261 1727747 - 1727770 + g 72 -4.4 -4.72497 | overlap 1727748 TCCAGTTTGCGGCTT TGCGAAGTGG CGAG CCACAGCGCG TTTTCTTGCTGGCTA TERM 2262 1728841 - 1728826 - g 76 -4 -4.96848 | overlap 1728830 TGGCGCACAGAAAAA TTTAGC CAAT GCCAAA CTGGGCGTTCGCATT EcSMS35_1720 1728170 - 1730272 + | TonB-dependent receptor TERM 2263 1730282 - 1730301 + TF 91 -11.4 -4.06903 | GAGTAATTACCTTGA TGCCCGGT ATTT GCCGGGCA TTTACTTTAACGATT EcSMS35_1721 1730973 - 1730308 - | GntR family transcriptional regulator EcSMS35_1722 1730972 - 1731103 + | hypothetical protein EcSMS35_1724 1731072 - 1731197 + | hypothetical protein EcSMS35_1723 1732209 - 1731172 - | zinc-binding dehydrogenase family oxidoreductase EcSMS35_1725 1732390 - 1732908 + | acetyltransferase TERM 2264 1733321 - 1733348 + G 72 -7 -4.25283 | gap 1, overlap 1733323 AATTTTACTTGTGGT TG-GCGCCTGGTT GGT AGCCAGACGCTCA TTTTAATCACAGGAT TERM 2265 1733323 - 1733345 + G 70 -9.8 -3.13504 | overlap 1733321 TTTTACTTGTGGTTG GCGCCTGGTT GGT AGCCAGACGC TCATTTTAATCACAG EcSMS35_1726 1732905 - 1733354 + | hypothetical protein EcSMS35_1727 1733588 - 1733355 - | hypothetical protein EcSMS35_1728 1733922 - 1733674 - | hypothetical protein EcSMS35_1730 1734121 - 1734237 + | hypothetical protein ydcW 1735658 - 1734234 - | gamma-aminobutyraldehyde dehydrogenase TERM 2266 1735022 - 1735042 + g 72 -6.7 -4.2349 | overlap 1735040 GCACTTTGGGATGTC CGGTCAGCG GAT CGCCCACCG TTTTGCCTCTGCCAA ydcV 1736474 - 1735680 - | ABC transporter, permease protein TERM 2267 1736063 - 1736050 - G 70 -3.8 -4.68994 | ACCACTACGCAAAAA GTCG CATGAC CGAC CACGATGGTGAAAAA ydcU 1737405 - 1736464 - | ABC transporter, permease protein TERM 2268 1737102 - 1737092 - G 70 -6.8 -4.14243 | overlap 1737093 1737099 CACGCCATTGGAAAA GCCA GAA TGGC GCTGGCGATAGTGAC ydcT 1738419 - 1737406 - | ABC transporter, ATP-binding protein TERM 2269 1738074 - 1738090 + g 70 -6.5 -4.25873 | TCTCCAGCGCCTCTT GCGCCAT CGC ATGCCGC TGTTTTTTATCCACG ydcS 1739582 - 1738437 - | ABC transporter, periplasmic substrate-binding protein EcSMS35_1735 1741233 - 1739827 - | GntR family transcriptional regulator TERM 2270 1740336 - 1740324 - G 78 -7.7 -4.31688 | opp_overlap 1740329 1740330, overlap 1740329 AAGAGCAATGCAAAA CACCA TCG TGGTG ATCCCACGCTTTCGC TERM 2271 1741003 - 1741016 + g 74 -2.3 -5.12068 | AGTGACTGGAATGAC TGGCG CTTT CGGCA TTTTTATTGCCTGTG TERM 2272 1741278 - 1741295 + r 71 -4.9 -4.45151 | opp_overlap 1741278 CGGCAGTCTATATCA GTTGTTA AAAA TGACAAC TTTTCATTAACTGTT EcSMS35_1736 1741749 - 1741312 - | hypothetical protein TERM 2273 1742000 - 1741983 - H 77 -7.1 -4.30177 | GAGTATATCAACAAA GTAAACA TTAG TGTTTAC CTCCGTGTGTAATTT EcSMS35_1737 1741993 - 1742115 + | hypothetical protein EcSMS35_1738 1742232 - 1742402 + | hypothetical protein EcSMS35_1739 1744455 - 1742494 - | U32 family peptidase EcSMS35_1740 1745064 - 1744528 - | DNA-binding protein EcSMS35_1742 1745063 - 1746055 + | benzoate transporter TERM 2274 1746041 - 1746070 + Tr 88 -9.3 -4.59109 | opp_overlap 1746042, overlap 1746027 1746043 GCTGCCGTTGCAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2275 1746069 - 1746042 - TR 86 -12.8 -3.14132 | opp_overlap 1746027 1746041 1746043 CTGCCGTTGCAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 2276 1746043 - 1746068 + Tr 100 -16.3 -3.90762 | opp_overlap 1746042, overlap 1746027 1746041 TGCCGTTGCAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG EcSMS35_1741 1747380 - 1746052 - | IS4 transposase TERM 2277 1747387 - 1747412 + H 75 -9.1 -3.61398 | opp_overlap 1747387 AATGTGCATAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 2278 1747412 - 1747387 - H 100 -9.8 -5.25803 | opp_overlap 1747387 AATGTGCATAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 2279 1747465 - 1747478 + H 71 -3.8 -4.82128 | opp_overlap 1747455, overlap 1747463 ACTGATCGGCATTAC TGCC GTTGCA GGCA TTTTCTATTTGCTCG EcSMS35_1743 1747487 - 1747765 + | benzoate membrane transport protein TERM 2280 1747791 - 1747772 - T 100 -13.6 -5.21236 | AACCGATAATAAAAA GCGCCATC TAAC GATGGCGC GTCTGGAACTACTTT EcSMS35_1744 1748468 - 1747800 - | putative lipoprotein TERM 2281 1748204 - 1748228 + g 78 -8.6 -4.2558 | opp_overlap 1748204 AAATTTTATCCAGAA CTTTCTGCCC TACCT GGGTAGAAGG TTTTGGTACCGGATA TERM 2282 1748326 - 1748315 - G 70 -5.8 -4.28774 | opp_overlap 1748315 CTACCCAACGTAAAA CAGG TTTA CCTG TTGCTGAGGTTGTTT TERM 2283 1748387 - 1748371 - G 79 -3.7 -5.03145 | TAATTGTTTAAAAAA CCAGA ATATTTA TCTGG CTGGGTGATTTTAGA TERM 2284 1748735 - 1748755 + r 71 -5.3 -4.44667 | CAGTAAACCATCTCA GCGTGGGGA ATT TTCACGCGC TTTGTTCTTACCGGA tehB 1749364 - 1748771 - | tellurite resistance protein TehB tehA 1750353 - 1749361 - | tellurite resistance protein TehA TERM 2285 1749871 - 1749853 - G 72 -5.3 -4.56597 | gap 1, overlap 1749855 GCCTGCGCCTAAAAA CACCAGAC CGGC GTC-GGTG TAGCCCAACGCACCA TERM 2286 1751026 - 1751038 + G 77 -3.3 -5.0925 | opp_overlap 1751026 TATGCTTTTATTGAA CATCG CGC CGAAG TTTTTGATTTTGCCA EcSMS35_1748 1750477 - 1751457 + | hypothetical protein rimL 1751988 - 1751449 - | ribosomal-protein-serine acetyltransferase TERM 2287 1751579 - 1751543 - G 74 -6.5 -4.5442 | opp_overlap 1751547 1751555 1751577, overlap 1751544 1751547 CCTTCAAGGATAAAA CCATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTGT CCACCCGACATTTGA TERM 2288 1751578 - 1751544 - G 72 -10 -3.3217 | opp_overlap 1751547 1751555 1751577, overlap 1751543 1751547 CTTCAAGGATAAAAC CATTGCGCAAAGCGAC CTG GTTGCTTTGCGGATTG TCCACCCGACATTTG TERM 2289 1751547 - 1751575 + g 83 -12.5 -3.28791 | opp_overlap 1751547 1751544 1751543, overlap 1751555 CAAGGATAAAACCAT TGCGCAAAGCGAC CTG GTTGCTTTGCGGA TTGTCCACCCGACAT TERM 2290 1752040 - 1752024 - R 100 -10.8 -5.02074 | GCAGTTGTTAAAAAA GCCGCC TAGCT GGCGGC TTAGGAAAGTTTACA TERM 2291 1752070 - 1752082 + r 74 -7.7 -4.13282 | ACCTCTTTGACGCTC TCCTG CTG CAGGA TTTTGAGCATCTCAT EcSMS35_1749 1752275 - 1752051 - | hypothetical protein TERM 2292 1752402 - 1752379 - R 89 -14.6 -2.90075 | TCGTGTTTAACCAGA CGGCACCTCC CGAA GAAGGTGCCG AAGAAAAAACGATTA EcSMS35_1750 1754034 - 1752415 - | periplasmic glucan biosynthesis protein, MdoG EcSMS35_1751 1755638 - 1754295 - | hypothetical protein TERM 2293 1755280 - 1755263 - G 75 -5.5 -4.7078 | GTAATGAGGTAAAAA CGCGGAA GGGA TTACGCG CCAGAGAAGCATCAT EcSMS35_1752 1755855 - 1756778 + | LysR family transcriptional regulator TERM 2294 1756787 - 1756802 + T 71 -9 -3.36983 | opp_overlap 1756782 1756781 GTTCTGAAAGGTGAA GGGATC TGTC GATCCC TTCCTTGAACATTTT trg 1758457 - 1756817 - | methyl-accepting chemotaxis protein III TERM 2295 1757727 - 1757739 + g 95 -9.1 -5.10497 | TCATTCATCGTCAGA TCGCC ACT GGCGA TTTTTTCAATCCGTT EcSMS35_1754 1759250 - 1759077 - | hypothetical protein TERM 2296 1759445 - 1759477 + r 77 -4.9 -4.92385 | overlap 1759444 1759447 TAGACCCGTATTCTT CGCCTGTACCA CGGGTCGGTTT TAGTACAGGCG TTTTCTTTAAATATC EcSMS35_1755 1760061 - 1759495 - | nickel-dependent hydrogenase, b-type cytochrome subunit gapC 1760214 - 1761215 + | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TERM 2297 1761224 - 1761244 + T 87 -14 -3.08015 | opp_overlap 1761224 ACTCTGACGCACACA GGCGGAGG AAAAA CCTCCGCC TCTTCCACTCATTAA TERM 2298 1761244 - 1761224 - T 87 -14 -2.91383 | opp_overlap 1761224 ACTCTGACGCACACA GGCGGAGG AAAAA CCTCCGCC TCTTCCACTCATTAA aldA 1762695 - 1761256 - | aldehyde dehydrogenase A TERM 2299 1762856 - 1762842 - R 70 -2.8 -5.0065 | opp_overlap 1762852 1762853 GAGGCAGAAATAAAA GGCA GGAGTTA TGCC CGTTTGCAAACAAGT TERM 2300 1762852 - 1762888 + r 85 -8 -4.62069 | opp_overlap 1762842, overlap 1762853 TAAAAGGCAGGAGTT ATGCCCGTTTGCAAAC AAGTG GTTCACAAACGGGCAA TTTTTAACGTAACGA TERM 2301 1762853 - 1762887 + r 83 -11.5 -3.3692 | opp_overlap 1762842, overlap 1762852 AAAAGGCAGGAGTTA TGCCCGTTTGCAAAC AAGTG GTTCACAAACGGGCA ATTTTTAACGTAACG EcSMS35_1758 1763692 - 1762892 - | hypothetical protein hrpA 1767867 - 1763965 - | ATP-dependent helicase HrpA TERM 2302 1765930 - 1765916 - G 70 -7 -4.06179 | GGGAAAATGGAGAAA CGCGCG TTA CGTGCG CCGGTATATTCTTGT TERM 2303 1766214 - 1766235 + g 71 -2.9 -4.7373 | overlap 1766219 CGAGGAAGTCGGATT CTTTGTCGT GGAA GCGACGATG TTTTTCGTCCGATGC TERM 2304 1767872 - 1767898 + H 74 -3.1 -5.10933 | gap 1, overlap 1767878 TGTTCTGTCATAACG TTAGT-GGGCAG TAGG CTGCCTGATTAA TTTTCTTTTAAATGA azoR 1768068 - 1768673 + | FMN-dependent NADH-azoreductase EcSMS35_1761 1770019 - 1768727 - | PAP2 family protein EcSMS35_1762 1771790 - 1770033 - | hypothetical protein TERM 2305 1771086 - 1771072 - G 71 -2.8 -4.84017 | AATCTCTGATAAAAA TCAATC TGC GGTTGA CGATGCACCACATAG cdsA2 1772702 - 1771806 - | phosphatidate cytidylyltransferase TERM 2306 1771851 - 1771839 - G 100 -3.3 -6.17669 | AATAAAATAAAAAAA TACCG GAG CGGTG AAAATTAATGAGTCA EcSMS35_1764 1773307 - 1772702 - | CDP-alcohol phosphatidyltransferase family protein EcSMS35_1765 1775783 - 1773477 - | hypothetical protein TERM 2307 1774175 - 1774185 + g 72 -5.4 -4.58283 | GTTTCATCGCCGTAC TCAG ATA CTGA TTTTTCGCCAGATTA TERM 2308 1775210 - 1775226 + g 81 -5.9 -4.87665 | TCATCAGCGCTTTTT TGACATT TTC AGTGTCA TTTTTGTCACTCGCA TERM 2309 1775842 - 1775807 - R 83 -6.3 -5.15634 | opp_overlap 1775807 1775809 1775811 1775816, overlap 1775811 1775816 CATGCCATTAAAAAA GAAACAAAAGGGAAA TGCATC TTTCCCTTTTGTATA TTCGTTATTCTCGCG TERM 2310 1775809 - 1775840 + r 71 -8.9 -3.36276 | opp_overlap 1775807 1775811 1775816, overlap 1775807 1775811 1775816 TGCCATTAAAAAAGA AACAAAAGGGAAA TGCATC TTTCCCTTTTGTA TATTCGTTATTCTCG TERM 2311 1775838 - 1775811 - R 100 -11.5 -5.0917 | opp_overlap 1775811 1775809 1775807 1775816, overlap 1775807 1775816 CCATTAAAAAAGAAA CAAAAGGGAAA TGCATC TTTCCCTTTTG TATATTCGTTATTCT TERM 2312 1775811 - 1775838 + r 81 -11.5 -3.23854 | opp_overlap 1775807 1775811 1775816, overlap 1775809 1775807 1775816 CCATTAAAAAAGAAA CAAAAGGGAAA TGCATC TTTCCCTTTTG TATATTCGTTATTCT TERM 2313 1775833 - 1775816 - R 87 -5.6 -5.3472 | opp_overlap 1775816 1775811 1775809 1775807, overlap 1775811 1775807 AAAAAAGAAACAAAA GGGAAA TGCATC TTTCCC TTTTGTATATTCGTT TERM 2314 1775816 - 1775833 + r 74 -5.6 -4.70453 | opp_overlap 1775811 1775807 1775816, overlap 1775811 1775809 1775807 AAAAAAGAAACAAAA GGGAAA TGCATC TTTCCC TTTTGTATATTCGTT EcSMS35_1766 1776707 - 1775847 - | aldo/keto reductase family oxidoreductase TERM 2315 1776869 - 1776892 + r 93 -11.8 -3.92373 | gap 1, opp_overlap 1776869 TCCGGCAATAAAAAA CCGCAAC-CTG TAT CAGCGTTGCGG TTTATGCATCACATA TERM 2316 1776892 - 1776869 - R 100 -11.8 -5.4505 | gap 1, opp_overlap 1776869 TCCGGCAATAAAAAA CCGCAAC-CTG TAT CAGCGTTGCGG TTTATGCATCACATA EcSMS35_1767 1782869 - 1776915 - | putative autotransporter TERM 2317 1777307 - 1777327 + g 70 -6.8 -4.11484 | GCGTGTGACGCAGTT TCACACCG GCATA CGGGGTGA TTTTCAGCCCTTCGC TERM 2318 1777804 - 1777828 + g 72 -6.3 -4.41348 | opp_overlap 1777805, overlap 1777805 CGCGCCTCACGGAAT ACGGTGGTCGC CTG GCTACCACTGA TTTGTTTCAGCGCGC TERM 2319 1777805 - 1777827 + g 70 -9.8 -3.24488 | opp_overlap 1777805, overlap 1777804 GCGCCTCACGGAATA CGGTGGTCGC CTG GCTACCACTG ATTTGTTTCAGCGCG TERM 2320 1777947 - 1777965 + g 73 -3.9 -4.78107 | gap 1 CACTGAGCCATCGGT CG-CTACA TCGG TGTAGGCG TTTTTGCTCATGGTC TERM 2321 1779984 - 1779999 + g 79 -4 -5.08824 | gap 1 GGATGTCAGATTGAT TGTC-CC TCC GGAGACA TTTTTTGCCTGCGAG TERM 2322 1781906 - 1781920 + g 78 -7.8 -4.33274 | TCGCGGGGTCATCCA CCGTTG CGC CGACGG TTTTAGTGATATAGA EcSMS35_1768 1783650 - 1783327 - | hypothetical protein EcSMS35_1769 1783843 - 1783658 - | putative lipoprotein EcSMS35_1770 1786479 - 1783840 - | hypothetical protein TERM 2323 1784146 - 1784161 + g 74 -10.4 -3.51934 | overlap 1784144 CATATTGTCTTTCAC CACCGC ATCT GCGGTG TCTTTATCCAGCCGC TERM 2324 1785480 - 1785505 + g 72 -9.7 -3.39862 | CCTGTTTCGCTTCAC CGGTCAGTTGC ATAG GCAGCTGGCTG TTATCCATGCTTAAT TERM 2325 1786909 - 1786884 - g 84 -7.5 -4.66953 | opp_overlap 1786905, overlap 1786901 GGAAGAGCTGAAAAA GCACGGCGTTA AATA TATCGCCCTGC GCTGTGCCGGTTTCA idhA 1786687 - 1787676 + | D-lactate dehydrogenase TERM 2326 1787684 - 1787706 + F 100 -14.9 -3.66018 | TGGTTTAATCTTGCC GCTCCCCTG CATTC CAGGGGAGC TTATTCAGATAATCC hslJ 1787787 - 1788209 + | heat shock protein HslJ EcSMS35_1772 1788331 - 1788206 - | putative lipoprotein TERM 2327 1788553 - 1788568 + H 80 -4.6 -5.27769 | opp_overlap 1788521 CGTCGAGAGCTGTCC TGCGCG TTGC CCCGCA TTTTTACTTTTTTAT EcSMS35_1774 1788559 - 1788675 + | hypothetical protein TERM 2328 1789742 - 1789730 - g 70 -6.9 -4.13903 | GACAGAACCAAAGAA CCCGG TGC CCAGG CAGAACCGCTCTATC TERM 2329 1790396 - 1790377 - g 70 -10 -3.16564 | gap 1 CTTCTATGTGATTAA CGC-GGCGA AAA TCGCCCGCG AATGTGGCCTGGCGG TERM 2330 1790426 - 1790439 + G 77 -3.1 -5.1287 | overlap 1790424 GCCCGAATTAATACC GTCAT GCAG ATGGC TTTTTTCCATCTGAC ydbK 1788746 - 1792270 + | pyruvate-flavodoxin oxidoreductase TERM 2331 1792302 - 1792331 + F 86 -7.1 -5.10064 | opp_overlap 1792307, overlap 1792304 1792307 TTATCCAATTCTAAA AAAAAGCCCGGAC GACT GTTCGGGCTTGTC TTTTTATATGTTGGA TERM 2332 1792304 - 1792329 + F 84 -9.7 -4.16832 | opp_overlap 1792307, overlap 1792302 1792307 ATCCAATTCTAAAAA AAAGCCCGGAC GACT GTTCGGGCTTG TCTTTTTATATGTTG TERM 2333 1792326 - 1792307 - f 100 -9.2 -5.81032 | opp_overlap 1792304 1792302 1792307 CAATTCTAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG TERM 2334 1792307 - 1792326 + F 93 -11.4 -4.16226 | opp_overlap 1792307, overlap 1792304 1792302 CAATTCTAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG TERM 2335 1793236 - 1793226 - g 74 -8.2 -3.8613 | TCGAAACATTAAGAA CGCC AAT GGCG ACGGTTTTGGCATCT ompN 1792636 - 1793754 + | outer membrane protein N TERM 2336 1793763 - 1793781 + F 93 -10.2 -5.03945 | GTTCTAAATCCTCCT GCCCGCTG TTA TGGCGGGC TTTTTCTGCTTATTC uspF 1793895 - 1794329 + | universal stress protein F TERM 2337 1794337 - 1794356 + F 100 -10.7 -4.95957 | opp_overlap 1794336 1794337 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2338 1794356 - 1794337 - f 74 -10.7 -2.55351 | opp_overlap 1794337, overlap 1794336 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC TERM 2339 1794575 - 1794565 - g 74 -2.4 -5.0809 | AACAAATTACAAAAA CGTC TGC GTCG TAACGTGGGCGAAGC TERM 2340 1794760 - 1794748 - g 74 -6.2 -4.47707 | CTCGATCAAAAACAA CCGG GCTTT CCGG AACACGTTCTGCCCG EcSMS35_1778 1794505 - 1795440 + | PP-loop family protein dbpA 1796942 - 1795569 - | ATP-independent RNA helicase DbpA TERM 2341 1795827 - 1795853 + g 70 -4.4 -4.52857 | opp_overlap 1795828, overlap 1795828 1795832 CGGCACAATGGAACT ATTAGCTGGCGG CGT TTGCCAGTTAAG TTTTATCTGCAACAT TERM 2342 1796255 - 1796241 - G 79 -10 -3.78234 | opp_overlap 1796241 1796240 1796239 ATGCAAACTTAATAA CCGTTG CAA CAACGG AATTTTGCCTTTGCT TERM 2343 1797230 - 1797211 - R 100 -10 -5.85178 | AACAGGCAAAAAAAA GCCGACTC ATCA AAGTCGGC GTCGTACGAATCAAT TERM 2344 1797367 - 1797384 + r 70 -2.7 -4.96848 | gap 1 AGAGTTTATTGACTT CGCT-CAA ACT TTGCGGCG TTTTTGTATACAGAC zntB 1798403 - 1797420 - | zinc transport protein ZntB TERM 2345 1799027 - 1799056 + G 82 -2.9 -5.28176 | gap 1, opp_overlap 1799026, overlap 1799028 1799029 CGCTCGGCAAATTAT CAGCGCA-AAAAAC AAG GTTTTTATGCGCGC TTTTTTCTGACTAAC TERM 2346 1799426 - 1799387 - g 75 -4.3 -4.75372 | gap 3 ATTACTGAGCAAAAA CGGC-TGGAGGAGCAGC-TG GAA CATGCTGC-CCACCATGACG CGATGACCGGATTAC EcSMS35_1781 1798598 - 1799890 + | sensory box-containing diguanylate cyclase EcSMS35_1782 1800474 - 1799911 - | Smr domain-containing protein TERM 2347 1800760 - 1800788 + r 100 -12.5 -5.94713 | CTGCTGTGTGTACTG TAGAGTCTGGCGG ATG TCGACAGACTCTA TTTTTTTTATGCAGT abgR 1801713 - 1800805 - | transcriptional regulator AbgR TERM 2348 1801578 - 1801561 - G 77 -3.4 -5.03715 | ACTACGGCGAAAAAA GAGTTG TGCCGC CAACCC TTCTTCCAGTTCCTG TERM 2349 1802514 - 1802559 + G 81 -8.3 -4.36914 | gap 1, overlap 1802518 TTACTGCCGTGCACA TTGGCACTGGCGTAC-CTGCGG GCA CCGTGGTGTGCGGCAGTGATAA TTTTATGGCAACCAC TERM 2350 1802518 - 1802555 + G 72 -11.3 -2.50077 | gap 1, overlap 1802514 TGCCGTGCACATTGG CACTGGCGTAC-CTGCGG GCA CCGTGGTGTGCGGCAGTG ATAATTTTATGGCAA TERM 2351 1803158 - 1803170 + G 70 -10.5 -2.76404 | opp_overlap 1803153 1803154, overlap 1803156 1803156 GCCGTCGAAACGCTG GCGCG CAC CGCGC TCAATTTTCCCTGGA abgA 1801898 - 1803199 + | aminobenzoyl-glutamate utilization protein A abgB 1803199 - 1804644 + | aminobenzoyl-glutamate utilization protein B abgT 1804675 - 1806207 + | aminobenzoyl-glutamate transport protein ogt 1806218 - 1806733 + | methylated-DNA-[protein]-cysteine S-methyltransferase TERM 2352 1806781 - 1806798 + F 78 -8.5 -4.14739 | opp_overlap 1806777 1806781 1806778 TTTTATGTAAAGTTA CCCTTAA CAAC TTAAGGG TTTTCAAATAGATAG fnr 1806928 - 1807680 + | fumarate and nitrate reduction regulatory protein TERM 2353 1807702 - 1807750 + F 95 -14.2 -3.23638 | opp_overlap 1807698 CGCATAACTCACTAT CCTTCTGTCATATCATTAAATT TTTCT GATTTATTGATCTGACAGAAGG TTCATCACTGTTTCA uspE 1807832 - 1808782 + | universal stress protein E TERM 2354 1808802 - 1808823 + T 100 -10.1 -5.30155 | opp_overlap 1808804, overlap 1808804 TCTTCAATAACTGAC AAGGCCCGA GTTA TCGGGCCTA TTTTTTACTTACTGC TERM 2355 1808821 - 1808804 - T 93 -12.7 -3.47751 | opp_overlap 1808802 1808804 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT TERM 2356 1808804 - 1808821 + T 100 -12.7 -4.27681 | opp_overlap 1808804, overlap 1808802 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT EcSMS35_1790 1809089 - 1808832 - | hypothetical protein TERM 2357 1810236 - 1810257 + G 70 -5.1 -4.43877 | overlap 1810237 ACGGTATGGGCTGAG TGGCTTGCT GCAC AGCAAGACG TTTATTTGAAGATTA EcSMS35_1791 1809333 - 1810364 + | small conductance mechanosensitive ion channel family protein TERM 2358 1810403 - 1810376 - T 87 -14.2 -2.74525 | overlap 1810373 1810392 CTAAATCAGACATCA CTGGCGTTATCC ACAA GGGTAACGCCAG TTCCCATCACATCAA mppA 1812028 - 1810415 - | periplasmic murein peptide-binding protein TERM 2359 1811023 - 1811033 + g 70 -6.8 -4.09685 | opp_overlap 1811022 1811023 CATCTGGTGTAAAAT GCCA CGC TGGC TTTTCGCCCGTCCCC TERM 2360 1811789 - 1811803 + g 70 -7.1 -4.11884 | CTGAGTCGCAACGCC GGGGA CAATC TCCCC TTTCTCGTTCTGATT TERM 2361 1811997 - 1811980 - G 72 -6.3 -4.3851 | CATACGAAAGAGAAA TGCTGCT GACC AACAGCA CACAACACGTGACTG EcSMS35_1793 1813264 - 1812365 - | LysR family transcriptional regulator EcSMS35_1794 1813402 - 1814322 + | hypothetical protein EcSMS35_1795 1814393 - 1815031 + | NmrA family protein TERM 2362 1815051 - 1815075 + F 100 -13.7 -4.22591 | ATTATATAGCTACCA TCGTACTGTAC TAT GTGCAGTACGA TTTATTAAACTTATT TERM 2363 1815271 - 1815258 - f 73 -5.3 -4.63932 | TAGCGTTGAAGAAAA GGATT TGAT AATCC GCAAAATTTGCACAA TERM 2364 1815341 - 1815356 + G 73 -11.8 -2.72144 | overlap 1815340 CCGTAACTCGCCCAC GCGCCG AACG CGGCGC ATTTCCGCCCGGTAC EcSMS35_1797 1815322 - 1816050 + | hypothetical protein EcSMS35_1796 1816990 - 1816025 - | mandelate racemase/muconate lactonizing enzyme family protein TERM 2365 1816734 - 1816777 + g 70 -6.7 -4.1347 | gap 1, opp_overlap 1816717 1816716 AGCGCATTACGTGCT GCGCCGGCA-GGGAGGATTT TTTGC AACTCCTCCCGTGTCAGCCC TTTCTCTAATTGCGG tpx 1817109 - 1817615 + | thiol peroxidase TERM 2366 1817662 - 1817610 - T 100 -16.5 -3.64703 | opp_overlap 1817610 1817614 1817623, overlap 1817616 CTGGCTGTACTGAAA GCATAAGTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCACGCTTAC TCTTCGTTCTTCTTC TERM 2367 1817610 - 1817664 + T 83 -11.1 -3.63862 | gap 2, opp_overlap 1817610 1817616, overlap 1817614 1817623 CTGGCTGTACTGAAA GCATAAGT-T-AATATGCCTGATGGTG TTG CACCATCAGGCATATTCACGCTTACTC TTCGTTCTTCTTCTG TERM 2368 1817614 - 1817658 + T 100 -15.9 -3.4382 | opp_overlap 1817610 1817616, overlap 1817610 1817623 CTGTACTGAAAGCAT AAGTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCACGC TTACTCTTCGTTCTT TERM 2369 1817656 - 1817616 - T 100 -22.9 -3.61609 | opp_overlap 1817614 1817610 1817623, overlap 1817610 GTACTGAAAGCATAA GTTAATATGCCTGATGGTG TTG CACCATCAGGCATATTCAC GCTTACTCTTCGTTC TERM 2370 1817623 - 1817649 + T 100 -19.6 -3.06737 | opp_overlap 1817616 1817610, overlap 1817614 1817610 AAGCATAAGTTAATA TGCCTGATGGTG TTG CACCATCAGGCA TATTCACGCTTACTC tyrR 1819200 - 1817659 - | transcriptional regulatory protein TyrR TERM 2371 1819361 - 1819371 + r 71 -4.6 -4.60924 | CATTATTTTTCGCTG GGCG TTT TGCC TTTTTGCAGAGTTTC EcSMS35_1800 1820409 - 1819348 - | hypothetical protein EcSMS35_1801 1821803 - 1820406 - | hypothetical protein TERM 2372 1821506 - 1821475 - G 82 -9.4 -4.18018 | gap 1, opp_overlap 1821479, overlap 1821479 TCGTTCGATTTAAAA CGTAGCGCCAGGCGA ATT TCGC-TGACGCCGCG CGTTGGCGTTGGCCA TERM 2373 1822170 - 1822180 + G 75 -4.6 -4.84017 | CGACCAAAACTACGG CGGG TAA TCCG TTTTTCTCGGAAGTT EcSMS35_1802 1821947 - 1822945 + | LacI family transcription regulator TERM 2374 1822950 - 1822983 + T 100 -13.1 -3.58533 | opp_overlap 1822948 1822947 1822951, overlap 1822951 CGTTGAAATAAATGT ATGCCGGATTTGGCG CTCG CGCCGCATCCGGCAA TTTAACCCATTATCA TERM 2375 1822982 - 1822951 - T 87 -14.4 -2.80589 | opp_overlap 1822950 1822951, overlap 1822948 1822947 GTTGAAATAAATGTA TGCCGGATTTGGCG CTCG CGCCGCATCCGGCA ATTTAACCCATTATC TERM 2376 1822951 - 1822982 + T 100 -16.6 -2.74799 | opp_overlap 1822951 1822948 1822947, overlap 1822950 GTTGAAATAAATGTA TGCCGGATTTGGCG CTCG CGCCGCATCCGGCA ATTTAACCCATTATC ompG 1823901 - 1822996 - | monomeric porin OmpG TERM 2377 1823756 - 1823744 - G 76 -9.1 -3.76289 | TTAAAATAGACAGAA GGCTC CGC GAGCC CATCCATATCTTCGC TERM 2378 1823921 - 1823942 + r 76 -10.1 -3.36569 | overlap 1823919 1823923 GTTCCTTGTATTATC CTGGGGGAA TGCC TTCCCCCTG TATTTAGCGAATTGC TERM 2379 1823923 - 1823940 + r 81 -11.3 -3.24976 | overlap 1823921 1823919 TCCTTGTATTATCCT GGGGGAA TGCC TTCCCCC TGTATTTAGCGAATT EcSMS35_1804 1825028 - 1823946 - | sugar ABC transporter, ATP-binding protein TERM 2380 1824155 - 1824179 + g 79 -12.1 -3.05963 | TATTTTCCTCTTGCG CGTCCGGATGA ATA TCTTCCGGGCG TATTCCCATCACGAT pgmB 1825701 - 1825042 - | beta-phosphoglucomutase EcSMS35_1806 1827965 - 1825698 - | glycosy hydrolase family protein TERM 2381 1825793 - 1825766 - G 71 -2.8 -4.78848 | gap 1 CCCCTAAACAGAAAA CAGATT-CTTCAG AGA CTGAAATAAGCTG ACCGTTCAAACGCAG EcSMS35_1807 1829005 - 1827962 - | gfo/idh/mocA family protein TERM 2382 1828523 - 1828507 - G 70 -3.6 -4.59773 | CTTTATTGGTAAAAA CGCCCC AGCCG GGAACG CCGCAGCGACGCAGG TERM 2383 1828907 - 1828885 - G 100 -15.6 -3.53012 | opp_overlap 1828876 CCTGCGCCTGGGAAA GGCGGCTGTC ACA GACAGCCACC AGTTCCAGATCGTTG EcSMS35_1808 1829815 - 1829027 - | AP endonuclease TERM 2384 1829653 - 1829664 + g 77 -7.2 -4.56702 | CGCAGGCGGTGGTCA CCGG TAAA CCGG TTTCTTTGATTGCCG EcSMS35_1809 1830885 - 1829833 - | zinc-binding dehydrogenase family oxidoreductase TERM 2385 1830744 - 1830772 + g 76 -11 -3.40597 | opp_overlap 1830736, overlap 1830742 1830764 CGATAAACGGGCTGG CGGCGCGGAAGT CGACC ACTTCCGTTCCG TGTTTCGGTGCGCCG EcSMS35_1810 1831758 - 1830916 - | putative sugar ABC transporter, permease protein EcSMS35_1811 1832626 - 1831745 - | putative sugar ABC transporter, permease protein EcSMS35_1812 1833939 - 1832647 - | putative sugar ABC transporter, periplasmic sugar-binding protein TERM 2386 1832891 - 1832907 + g 76 -7.9 -4.15044 | TTGTCTTTCCAGGTG GCGGTAG TGA CAACCGC TTTGTTCACCGGCAG EcSMS35_1813 1835632 - 1833953 - | alpha amylase family protein TERM 2387 1835834 - 1835809 - R 93 -9.7 -5.0916 | opp_overlap 1835827, overlap 1835810 1835814 GGTGTAACAGAAAAA GTAAACGGCGC ATAA GCGCCGCTTAG GGTGGATTCTTTTAA TERM 2388 1835833 - 1835810 - R 100 -13.2 -3.64773 | opp_overlap 1835827, overlap 1835809 1835814 GTGTAACAGAAAAAG TAAACGGCGC ATAA GCGCCGCTTA GGGTGGATTCTTTTA TERM 2389 1835829 - 1835814 - R 95 -11.8 -4.41882 | opp_overlap 1835827, overlap 1835810 1835809 AACAGAAAAAGTAAA CGGCGC ATAA GCGCCG CTTAGGGTGGATTCT pspE 1836160 - 1835846 - | phage shock protein E pspD 1836456 - 1836235 - | phage shock protein PspD pspC 1836824 - 1836465 - | phage shock protein C pspB 1837048 - 1836824 - | phage shock protein B pspA 1837770 - 1837102 - | phage shock protein A TERM 2390 1837187 - 1837197 + g 82 -3.2 -5.27335 | opp_overlap 1837183 AGTTCGGCAAACTGA TCGT CCA GCGA TTTTTGTTTACCGAA TERM 2391 1838815 - 1838801 - g 93 -8.6 -4.77438 | opp_overlap 1838800 1838803 ATGCAGCAGGAAAAA GAGTTG CTG CAACTC AGTTTGCAACAGGGG pspF 1837937 - 1838914 + | sigma-54 dependent transcriptional regulator PspF TERM 2392 1838968 - 1838933 - T 77 -9.6 -3.65991 | opp_overlap 1838945, overlap 1838934 AGTTGGGCAATACAA CTTGCCGGATGCGGCG TGAA CGCCTTATCCGGCATA CATAATCAATACGTC TERM 2393 1838967 - 1838934 - T 74 -10.9 -2.79273 | opp_overlap 1838945, overlap 1838933 GTTGGGCAATACAAC TTGCCGGATGCGGCG TGAA CGCCTTATCCGGCAT ACATAATCAATACGT gabT1 1840310 - 1839045 - | 4-aminobutyrate transaminase TERM 2394 1839267 - 1839292 + g 78 -7.5 -4.44046 | gap 1 CATAGACCCCAGACC GCGTACC-GCCG CGA TGGCCGGAACGC TTTCTTTGGCATCAA TERM 2395 1839453 - 1839435 - G 75 -11.6 -3.11687 | GTAAGTACCACCCAA CCCGCCCG GCG CGGGCGCG TCCATAATATTCGCG TERM 2396 1839959 - 1840000 + g 77 -8.7 -4.13767 | opp_overlap 1839997, overlap 1839944 CGCGGGCGATTTTCA CCGCGTTCTCCACCGCT TCCGCACC GGTGGTGAAGAACGCAG TTTTAGCCTGCCCGC puuB 1841628 - 1840348 - | gamma-glutamylputrescine oxidoreductase TERM 2397 1840425 - 1840403 - G 70 -11.2 -2.72511 | overlap 1840402 CCCATCGCGGTAAAT GGCACGCGCA GCG TGCGCCCGCC GGGGAACGGGTAATG TERM 2398 1841058 - 1841074 + g 74 -10.1 -3.55761 | GGCGGATGGCGTCCG CTTCGCC AAT GGCGAGG TTTAGCGGATGAATA TERM 2399 1841167 - 1841178 + g 70 -5.8 -4.1822 | overlap 1841166 AGCGTTGGCGTCCAG CAGC TCCA GCTG TTTATTGCCGTAGCG puuC 1843117 - 1841630 - | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase TERM 2400 1842954 - 1842966 + g 74 -7.7 -4.07885 | TCGATATCGACGCTC TTGCC GCG GGCAA TTTTCGCCAGCGGTG TERM 2401 1843182 - 1843196 + r 87 -8.5 -4.55295 | GGGCGCAGAGATCCC CGGGC CGTAT GCCCG TTTATTTCTGGCGAC puuR 1843824 - 1843267 - | transcriptional regulator PuuR puuD 1844603 - 1843851 - | gamma-glutamyl-gamma-aminobutyrate hydrolase TERM 2402 1845619 - 1845609 - g 70 -5.4 -4.4009 | TCTGATGGCAGAAAA GCAT AAG ATGC ACGCCACTTTTATGG puuA 1844827 - 1846245 + | glutamate--putrescine ligase TERM 2403 1846248 - 1846259 + F 70 -7.2 -4.0031 | opp_overlap 1846248 GAAAAACGCGTAATA CCCC TTGC GGGG TTGTTTCATCGGCCT TERM 2404 1846426 - 1846409 - f 71 -7.7 -3.78953 | gap 1, overlap 1846410 ATGCCGATGATTAAA TCCC-CGC ATG GCGAGGGA GGCTGCGTATGCGCC TERM 2405 1847747 - 1847728 - g 71 -2.9 -4.81082 | gap 1, opp_overlap 1847729 1847730, overlap 1847729 1847730 AAGGAATGAATAAAA GCTGGAAG GATCA CTTCCA-C TATTTGCTGATGCCG EcSMS35_1826 1846548 - 1847933 + | amino acid permease TERM 2406 1847990 - 1847934 - f 71 -8.9 -3.29324 | opp_overlap 1847942 1847942 GTGAGCGAAACGTAA TTGTCGGAT-GCGCGGCGCATTATCCT GCCTG AGGGTAATGCGCCGCGCCATT-AACTA TAAAAAGATGTATGA TERM 2407 1847942 - 1847983 + F 100 -20.4 -3.12351 | gap 1, opp_overlap 1847934, overlap 1847942 AACGTAATTGTCGGA T-GCGCGGCGCATTATCCT GCCTG AGGGTAATGCGCCGCGCCA TTAACTATAAAAAGA EcSMS35_1827 1848067 - 1848312 + | hypothetical protein TERM 2408 1848521 - 1848489 - f 100 -15.7 -3.16039 | opp_overlap 1848498, overlap 1848476 AATCACGGGTACGAA TGTTGAACAGATGGC GAC GCCACCTGTTCAACG ACCAACCACACGGCC TERM 2409 1848717 - 1848728 + G 81 -7.2 -4.68545 | overlap 1848721 CCCGCATGCTGATAT CCGC GACA GCGG TTTTGTCTATTGCGT TERM 2410 1849134 - 1849154 + G 75 -5.3 -4.72201 | overlap 1849133 1849135 TCATACCGTTGAGTT CCGTCTGGC TCA GCCGGATGC TTCTTTTTTGTGGCA TERM 2411 1849831 - 1849811 - g 76 -7.6 -4.1899 | gap 1 CCAGTCCACTGAAAA CCGCC-GAA CTGA TTCAGGCGG ATATGGCACAGGTTG sapA 1848649 - 1850268 + | peptide ABC transporter, periplasmic peptide-binding protein TERM 2412 1850489 - 1850516 + G 78 -8.4 -4.20806 | AAAAGAGGTCTTCCC GGCGACGATGGA GCTG TGCATCCTCGCC TTTGGTTTTGCGCTG sapB 1850265 - 1851230 + | peptide ABC transporter, permease protein SapB TERM 2413 1851279 - 1851246 - g 91 -10.9 -4.26188 | gap 1, opp_overlap 1851245 CGTATACAGCGAAAA GCGCCCGCCGGGCACG CTG CGTACC-GCCTGGCGC AAATTTTATAGTGAC sapC 1851217 - 1852107 + | peptide ABC transporter, permease protein SapC sapD 1852107 - 1853099 + | peptide ABC transporter, ATP-binding protein SapD TERM 2414 1853158 - 1853141 - g 77 -6.9 -4.45664 | opp_overlap 1853140 1853141 1853147 1853148 GTAATTTAAGTAAAA CGTTCCG CTAC CGGACCG GTTGGTTTCGTCGTC sapF 1853101 - 1853907 + | peptide transport system, ATP-binding protein SapF TERM 2415 1853907 - 1853959 + T 88 -9.1 -4.50661 | overlap 1853911 1853915 GCGTAAGGACCGTTA GTGTTTTGCACCTCATCCTGACAGG GCC CCCCTCAGGATGAGGTGTTCATTAC TTTTGATTGTCGATT TERM 2416 1853911 - 1853955 + T 85 -10.7 -3.77325 | overlap 1853907 1853915 AAGGACCGTTAGTGT TTTGCACCTCATCCTGACAGG GCC CCCCTCAGGATGAGGTGTTCA TTACTTTTGATTGTC TERM 2417 1853915 - 1853951 + T 100 -18.1 -3.54779 | overlap 1853911 1853907 ACCGTTAGTGTTTTG CACCTCATCCTGACAGG GCC CCCCTCAGGATGAGGTG TTCATTACTTTTGAT eefD 1855119 - 1853956 - | multidrug efflux transport protein EefD eefC 1856501 - 1855128 - | multidrug efflux outer membrane protein EefC eefB 1859612 - 1856505 - | multidrug efflux transport protein EefB TERM 2418 1857950 - 1857940 - G 72 -6.8 -4.16016 | opp_overlap 1857940 TCAGTGGGTAAGAAA CTGC CGG GCAG TTTCCACATCATCAG TERM 2419 1858294 - 1858268 - G 74 -10.8 -3.22102 | opp_overlap 1858284, overlap 1858266 1858271 ATACGGCTGACAACA CCAGCGCAATGG CAA CCAGTGCGCCAG AAATCTCGCCCATTG TERM 2420 1858291 - 1858271 - G 70 -11.1 -2.80074 | opp_overlap 1858284, overlap 1858268 1858266 CGGCTGACAACACCA GCGCAATGG CAA CCAGTGCGC CAGAAATCTCGCCCA eefA 1860733 - 1859612 - | multidrug efflux transport protein EefA TERM 2421 1860861 - 1860844 - R 91 -11.3 -4.0825 | opp_overlap 1860843 1860842 1860841 TTCGCAATGAAATAA GGGGGAT TAAT ATCCCCC GCTATTGGTTAATTC eefR 1861448 - 1860882 - | transcriptional regulator EefR TERM 2422 1861474 - 1861491 + r 83 -7.1 -4.8269 | TGGCCTATCACTTGG TGAGAAT GATC ATTCTCA TTTTTGCTAATTATA EcSMS35_1838 1861764 - 1861624 - | hypothetical protein fabI 1861926 - 1862714 + | enoyl-(acyl-carrier-protein) reductase (NADH) TERM 2423 1862734 - 1862754 + F 95 -12.5 -3.71149 | opp_overlap 1862731 1862734, overlap 1862735 TCTGTTGGTAAATAT TGGGCGGCG TTC TGCCGCCCG TTATCTCTGTTATAC TERM 2424 1862735 - 1862753 + F 86 -13.8 -2.81966 | opp_overlap 1862734 1862731, overlap 1862734 CTGTTGGTAAATATT GGGCGGCG TTC TGCCGCCC GTTATCTCTGTTATA TERM 2425 1863350 - 1863361 + G 75 -4.4 -4.75309 | opp_overlap 1863350 CTGTGTGATCATTAA CCAA ATCA TTGG TTTTATTGGCTTTCA EcSMS35_1840 1862859 - 1863986 + | hypothetical protein TERM 2426 1864348 - 1864335 - g 72 -4.5 -4.62336 | opp_overlap 1864335 AGTTCAGGGCAAAAA TGACC GTCT GGCCA TCGTTCCTGATCATC TERM 2427 1865803 - 1865814 + G 72 -7.2 -4.15222 | opp_overlap 1865802 1865803 CGTTTGGTTGATAAC GGCG CTAT CGCC TTTATTCCGGCACCT rnb 1864054 - 1865988 + | exoribonuclease II TERM 2428 1865999 - 1866023 + F 100 -15.8 -4.42062 | CGTAATCTTCTTTCA CGGCCCATTC CTCAT GAATGGGCCG TTTATTTCCCCGCTC EcSMS35_1842 1866223 - 1868208 + | sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase EcSMS35_1843 1868356 - 1868529 + | hypothetical protein TERM 2429 1868946 - 1868912 - g 81 -12.8 -3.22491 | overlap 1868901 AAATGGCAGCAGCAA TGCCCTGCTCGCCCGG ACT CTGGGCGAGCAGAAGA AAAATGTCACGATCA EcSMS35_1844 1868619 - 1869368 + | DeoR family transcriptional regulator EcSMS35_1845 1869637 - 1869855 + | osmotically inducible lipoprotein B TERM 2430 1869980 - 1869944 - T 77 -7.4 -4.41956 | gap 1, opp_overlap 1869953, overlap 1869953 ATACACACAGTAAAA CATTCGAAAGCCACGGA TATA TCCGTGGCTTTTT-ATG TTAGCCGCCTGCGAG TERM 2431 1869953 - 1869972 + T 100 -13.6 -5.0916 | opp_overlap 1869944 1869953 GTAAAACATTCGAAA GCCACGGA TATA TCCGTGGC TTTTTATGTTAGCCG TERM 2432 1869972 - 1869953 - T 100 -13.6 -3.71687 | opp_overlap 1869953, overlap 1869944 GTAAAACATTCGAAA GCCACGGA TATA TCCGTGGC TTTTTATGTTAGCCG EcSMS35_1846 1870310 - 1869981 - | putative translation initation factor SUI1 pyrF 1871044 - 1870307 - | orotidine 5'-phosphate decarboxylase EcSMS35_1848 1871060 - 1871212 + | hypothetical protein EcSMS35_1849 1872405 - 1871236 - | TPR repeat-containing protein TERM 2433 1871598 - 1871612 + g 70 -7.1 -4.08945 | CGCGCTGCAGGAACT CTGCC CATTC GGCAG TTTTACCCAACTGCT EcSMS35_1850 1872720 - 1872412 - | hypothetical protein pgpB 1873633 - 1872869 - | phosphatidylglycerophosphatase B ribA 1873803 - 1874393 + | GTP cyclohydrolase II TERM 2434 1874397 - 1874371 - T 77 -6.6 -4.44974 | opp_overlap 1874372, overlap 1874343 1874372 CCAAAGCCGAGAAAA TGGGTCATTTGC TGA ACAAATAACCCT CTTGCATTGTGTAAT TERM 2435 1874396 - 1874372 - T 74 -10.1 -3.26262 | opp_overlap 1874372, overlap 1874371 CAAAGCCGAGAAAAT GGGTCATTTGC TGA ACAAATAACCC TCTTGCATTGTGTAA TERM 2436 1874450 - 1874416 - T 77 -11.6 -2.52896 | opp_overlap 1874413 GCATTGTGTAATTCA TTTGCTTGCCGG AAGCAAAATAA CCGGCAAGCAAA TACTCGTTACTTCAA acnA 1877132 - 1874457 - | aconitate hydratase 1 TERM 2437 1874838 - 1874848 + g 72 -8.2 -3.82433 | opp_overlap 1874837, overlap 1874841 TTTCCCGGCAATCAC CGCC AGC GGCG TTTGCTCCTGCTTAT TERM 2438 1875925 - 1875959 + g 76 -7.9 -4.2828 | CGATCTTTATGCGTG GCATTTACTTCCAGT TCGTT ACTGGCGGCAAATGC TTTTGGTACATCGGG TERM 2439 1876768 - 1876729 - G 75 -7.3 -4.32034 | gap 2, overlap 1876757 TCATCATCACCAAAA CGATCGA-C-GGTCACCGA GTGG TCAATGACCAGGTCGACCG GTGAGAGCGGGTTAA EcSMS35_1854 1877619 - 1877452 - | hypothetical protein EcSMS35_1855 1877750 - 1877622 - | hypothetical protein TERM 2440 1878067 - 1878034 - R 74 -9.7 -3.35613 | overlap 1878030 ACAAAAGAGAATATA TTCCGGCACCTTC GCTACATA AAAGGTGCCGAAA ATAACGCAAGAAATT cysB 1879055 - 1878081 - | HTH-type transcriptional regulator CysB TERM 2441 1879240 - 1879208 - R 80 -10.8 -3.29121 | gap 1, opp_overlap 1879215, overlap 1879215 AAAAATAATATGCAA TAAA-AAAGGGCCGC TTTC GCGACCCTTTGTTTA TAAAAACCTGACAGA TERM 2442 1879232 - 1879215 - R 100 -10.5 -5.49234 | opp_overlap 1879215, overlap 1879208 ATATGCAATAAAAAA GGGCCGC TTTC GCGACCC TTTGTTTATAAAAAC TERM 2443 1879215 - 1879232 + r 87 -8.3 -4.55295 | opp_overlap 1879215 1879208 ATATGCAATAAAAAA GGGCCGC TTTC GCGACCC TTTGTTTATAAAAAC topA 1881861 - 1879264 - | DNA topoisomerase I TERM 2444 1880940 - 1880951 + g 90 -4.4 -5.40072 | CATACAAACGCTGCG CCAT CATC ATGG TTTTTTTCACGCCAA TERM 2445 1881057 - 1881072 + g 74 -6 -4.56775 | TGTCTTCACGTTCCA GCACGC TGTA GCGCGC TTTTTCCAGCAGACT TERM 2446 1881713 - 1881724 + g 70 -4.4 -4.58395 | GTCTTGGTGGAGGTA GAGT CGGC ACTC TTTTTGGCAGCTGAG EcSMS35_1858 1882241 - 1882492 + | hypothetical protein TERM 2447 1882500 - 1882519 + T 93 -10.7 -4.46775 | opp_overlap 1882500 TTGATTAAAGCAAAA CGCGAGG TCTTAC CCTCGCG TTTGTCTTTTACATC TERM 2448 1882519 - 1882500 - T 93 -10.7 -4.58773 | opp_overlap 1882500 TTGATTAAAGCAAAA CGCGAGG TCTTAC CCTCGCG TTTGTCTTTTACATC sohB 1883577 - 1882528 - | S49 family peptidase TERM 2449 1883457 - 1883469 + g 82 -9.1 -4.2528 | TGTTGACCCGTAACT CGCCA CGC TGGCG TTTATTACGTTGAGC EcSMS35_1860 1883797 - 1884555 + | short chain dehydrogenase/reductase family oxidoreductase btuR 1884552 - 1885142 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2450 1885149 - 1885177 + T 93 -11.8 -3.82433 | opp_overlap 1885149 GATTATTAAGGGAAA GCACCTCAAAAG ATTGC CTCTTGAGGTGC TTTAATCATAATTAT TERM 2451 1885177 - 1885149 - T 100 -14.7 -3.79043 | opp_overlap 1885149 GATTATTAAGGGAAA GCACCTCAAAAGA TTG CCTCTTGAGGTGC TTTAATCATAATTAT EcSMS35_1862 1885503 - 1885195 - | hypothetical protein EcSMS35_1863 1886515 - 1885514 - | putative lipoprotein TERM 2452 1886175 - 1886200 + g 85 -3.3 -5.38054 | opp_overlap 1886179, overlap 1886179 TAAGCGCTCATGCTA TTAATGACTTC CATT GAAGCCAGTAA TTTTTCTTTCTCGAA TERM 2453 1886662 - 1886649 - R 91 -9.5 -4.84642 | opp_overlap 1886649 TTCAAATGAAGAAAA GGCCC CGCA GGGCC TTTATTTTATACTTA TERM 2454 1886649 - 1886662 + r 91 -9.5 -4.82863 | opp_overlap 1886649 TTCAAATGAAGAAAA GGCCC CGCA GGGCC TTTATTTTATACTTA rluB 1887560 - 1886685 - | ribosomal large subunit pseudouridine synthase B TERM 2455 1887253 - 1887269 + g 74 -7.9 -4.07885 | opp_overlap 1887255 CGCCCCACGGCAATC CAGCGTG CGC CACGCAG TTTTGGCAGACGGTC TERM 2456 1887641 - 1887615 - R 76 -11 -3.01712 | opp_overlap 1887606 1887605 1887621 TGCTTTTGTGCAACA GTGAGTCAGA ATTTACA TCTGACTCAC TGATAGTAAAGTCTG EcSMS35_1865 1889666 - 1887771 - | hypothetical protein TERM 2457 1889592 - 1889556 - G 90 -11.7 -3.92324 | opp_overlap 1889556 1889558 1889559, overlap 1889558 1889560 GGCTTCAACATCAAA GAGAGAGATCCCTTCTT CAT AAGAAGGGATCTCCGTG TTTTTCGCATAACTC TERM 2458 1889556 - 1889592 + g 91 -9.5 -4.62783 | opp_overlap 1889556 1889558 1889560, overlap 1889558 1889559 GGCTTCAACATCAAA GAGAGAGATCCCTTCTT CAT AAGAAGGGATCTCCGTG TTTTTCGCATAACTC TERM 2459 1889558 - 1889590 + g 93 -12.1 -3.92746 | opp_overlap 1889558 1889556 1889560, overlap 1889556 1889559 CTTCAACATCAAAGA GAGAGATCCCTTCTT CAT AAGAAGGGATCTCCG TGTTTTTCGCATAAC TERM 2460 1889589 - 1889558 - G 100 -15.4 -3.55084 | gap 1, opp_overlap 1889556 1889558 1889559, overlap 1889556 1889560 CTTCAACATCAAAGA GAGAGATCCCTTCTT CAT AAGAAGGGATCTC-C GTGTTTTTCGCATAA TERM 2461 1889559 - 1889589 + g 95 -15.6 -2.95166 | opp_overlap 1889558 1889556 1889560, overlap 1889558 1889556 TTCAACATCAAAGAG AGAGATCCCTTCTT CAT AAGAAGGGATCTCC GTGTTTTTCGCATAA TERM 2462 1889588 - 1889560 - G 100 -19.1 -3.34589 | opp_overlap 1889559 1889558 1889556, overlap 1889558 1889556 TCAACATCAAAGAGA GAGATCCCTTCTT CAT AAGAAGGGATCTC CGTGTTTTTCGCATA EcSMS35_1866 1890350 - 1889694 - | Sua5/YciO/YrdC/YwlC family protein TERM 2463 1890160 - 1890171 + gr 79 -3.6 -5.1167 | CGAATACGACAAATA CGCT CCAT GGCG TTTTTATCTTCAATT EcSMS35_1867 1891192 - 1890311 - | putative phosphoesterase TERM 2464 1891418 - 1891436 + H 100 -8.8 -5.75342 | GCAATCAGATACCCA GCCCGC CTAATTA GCGGGC TTTTTTTTGAACAAA TERM 2465 1891491 - 1891481 - g 82 -3.2 -5.20783 | ATGCAAACACAAAAA CCGA CTC TCGA ACTGCTAACTTGCAA TERM 2466 1892135 - 1892150 + G 77 -10.4 -3.6502 | opp_overlap 1892130 CTGACCGAAACCGCG CCACCG CTGC CGGTGG TTTCCGTGCCGCATA trpE 1891466 - 1893028 + | anthranilate synthase, component I TERM 2467 1893047 - 1893059 + G 72 -6.3 -4.32402 | CTGACATTCTGCTGC TCGAT AAT ATCGA TTCTTTTACTTACAA TERM 2468 1893954 - 1894004 + G 77 -11.9 -3.26933 | gap 1, opp_overlap 1893946 1893973, overlap 1893952 GGCGAAACACGGCAA CCGTAGCGTCTCCAGTAAATCCGG CTCG TCGGATCTGCTGGCGGCGTT-CGG TATTAATCTTGATAT trpD 1893028 - 1894623 + | anthranilate synthase, component II TERM 2469 1895894 - 1895882 - g 86 -10.5 -3.89614 | opp_overlap 1895881 1895880 1895878 TGGAAGCGGCACAAA CCGGC TGC GCCGG ACTTGATTTTAATTC trpC 1894624 - 1895985 + | tryptophan biosynthesis protein trpCF TERM 2470 1896126 - 1896108 - g 82 -7.4 -4.58395 | opp_overlap 1896110, overlap 1896111 GTCAGTGCGCAAAAA GATCCTGA ATT TCAGGCTC AGTTCAACGACCTGC trpB 1895997 - 1897190 + | tryptophan synthase, beta subunit trpA 1897190 - 1897996 + | tryptophan synthase, alpha subunit TERM 2471 1898003 - 1898025 + F 100 -11.2 -5.13137 | overlap 1898004 CGCAGTTAATCCCAC AGCCGCCAGT TCC GCTGGCGGCA TTTTTACTTTCTTTA TERM 2472 1898004 - 1898024 + F 100 -14.7 -3.65442 | overlap 1898003 GCAGTTAATCCCACA GCCGCCAGT TCC GCTGGCGGC ATTTTTACTTTCTTT EcSMS35_1873 1898377 - 1898556 + | hypothetical protein TERM 2473 1898556 - 1898542 - f 78 -8.6 -4.15222 | AGCGGTGGTAATAAA TCAGGA AAA TCCTGA TTCACCGTTCATTAT TERM 2474 1898600 - 1898621 + F 87 -13.7 -2.94144 | opp_overlap 1898595, overlap 1898596 TAAAGATAATTGCAT CTGCGGGCC GTAT GGCTCGCAG TGATTTCACTGGAGA yciF 1898621 - 1899142 + | YciF protein EcSMS35_1875 1899415 - 1899693 + | hypothetical protein TERM 2475 1899717 - 1899739 + T 100 -14.2 -4.84017 | overlap 1899718 1899737 ATACCATGTCCTTAT TGACCCCGTA TAT TACGGGGTCG TTTTTGTGCGGAATT TERM 2476 1899718 - 1899738 + T 100 -15.5 -3.49687 | overlap 1899717 1899737 TACCATGTCCTTATT GACCCCGTA TAT TACGGGGTC GTTTTTGTGCGGAAT ompW 1900391 - 1899753 - | outer membrane protein W TERM 2477 1900332 - 1900314 - G 82 -3 -5.28176 | overlap 1900316 TGCACGCATAAAAAA TTCGCCTG CTT CATGCGCA TAGGCACTGCCAGAG EcSMS35_1877 1900746 - 1901489 + | hypothetical protein TERM 2478 1901828 - 1901812 - g 72 -4.3 -4.7254 | overlap 1901813 ATGGGTGATGAAAAA GCCGCTA ATT CAGCGGA TGCTGGGTAAAGAAC ispZ 1901519 - 1902058 + | intracellular septation protein A TERM 2479 1902110 - 1902144 + F 88 -10.8 -4.22948 | overlap 1902116 CCTCTGTTCTCCTCA GGAAAATCATAGTAGC ATC GCGCCTGTGATTTTCC TTTTAAGTCGGTTTT yciA 1902163 - 1902561 + | acyl-CoA thioesterase YciA TERM 2480 1902595 - 1902562 - T 100 -16.9 -3.14564 | opp_overlap 1902564 1902571, overlap 1902564 1902571 TTACCTGTTGAGTAA TAGTCAAAAGCCTCC GGTC GGAGGCTTTTGACTT TATGCTTACTGAATT TERM 2481 1902593 - 1902564 - T 100 -19.5 -3.13522 | opp_overlap 1902564 1902571, overlap 1902562 1902571 ACCTGTTGAGTAATA GTCAAAAGCCTCC GGTC GGAGGCTTTTGAC TTTATGCTTACTGAA TERM 2482 1902564 - 1902593 + T 100 -19.5 -4.08144 | opp_overlap 1902564 1902562 1902571, overlap 1902571 ACCTGTTGAGTAATA GTCAAAAGCCTCC GGTC GGAGGCTTTTGAC TTTATGCTTACTGAA TERM 2483 1902586 - 1902571 - T 85 -10.4 -4.29325 | opp_overlap 1902564 1902571, overlap 1902564 1902562 GAGTAATAGTCAAAA GCCTCC GGTC GGAGGC TTTTGACTTTATGCT TERM 2484 1902571 - 1902586 + T 87 -10.4 -4.40173 | opp_overlap 1902571 1902564 1902562, overlap 1902564 GAGTAATAGTCAAAA GCCTCC GGTC GGAGGC TTTTGACTTTATGCT tonB 1903332 - 1902601 - | outer membrane receptor-mediated transport energizer protein TonB TERM 2485 1902687 - 1902697 + g 85 -6.8 -4.74103 | GCTCATAACGCCATC TGCG CAT CGCA TTTTTCACTTCACGC EcSMS35_1881 1903541 - 1903837 + | YciL domain-containing protein EcSMS35_1882 1903990 - 1904247 + | hypothetical protein TERM 2486 1905873 - 1905859 - g 82 -2.8 -5.19328 | opp_overlap 1905859 ATCGGAGAAGAAAAA GATGAA GAT TTCGTC TTTAAAATGAGCACA EcSMS35_1884 1904356 - 1906149 + | sulfatase family protein EcSMS35_1883 1906745 - 1906146 - | hypothetical protein TERM 2487 1906214 - 1906187 - G 85 -13.6 -2.8076 | opp_overlap 1906187, overlap 1906184 AATCATCATTAATTA TGTAGACGCCTA AAAT TAGGCATCTACA TTTTATTAGAAAAGA TERM 2488 1906187 - 1906214 + g 100 -11.4 -4.63218 | opp_overlap 1906187 1906184 AATCATCATTAATTA TGTAGACGCCTA AAAT TAGGCATCTACA TTTTATTAGAAAAGA TERM 2489 1906546 - 1906529 - G 75 -4.9 -4.87273 | opp_overlap 1906531, overlap 1906531 AATACCGGATAAAAA CACAGTA TAAA TACTGTA TATACACCCAGTAAA EcSMS35_1885 1907157 - 1906891 - | hypothetical protein EcSMS35_1886 1907391 - 1907738 + | IS3 family transposase EcSMS35_1887 1907782 - 1908192 + | IS2 transposase orfA EcSMS35_1888 1908150 - 1909055 + | IS2 transposase orfB EcSMS35_1889 1909030 - 1909569 + | IS911 transposase orfB TERM 2490 1909671 - 1909689 + F 70 -6.6 -4.07124 | ATCATCTCGTTTCTT GCCCAGGG ACT TCCTGAGC TTTGTGTCGGTAATC TERM 2491 1909927 - 1909957 + F 77 -9.1 -3.74178 | opp_overlap 1909930, overlap 1909933 TAGAAATTCAATATT TAAGGGCACGGTT TTTGC AACCGTGTTCTTG TTTGGCCTTTCCTTA TERM 2492 1909933 - 1909951 + F 80 -8.9 -4.1023 | opp_overlap 1909930, overlap 1909927 TTCAATATTTAAGGG CACGGTT TTTGC AACCGTG TTCTTGTTTGGCCTT kch 1910255 - 1911463 + | potassium channel protein kch TERM 2493 1911487 - 1911515 + F 72 -10.3 -2.86961 | opp_overlap 1911487 1911486 1911482 1911481 1911490, overlap 1911487 1911490 GACGGAAGAGTAAAC TTATTGGGCACCG CAA TGGTGCCCAGTAC ATTTAGATATTGTAG TERM 2494 1911487 - 1911516 + F 75 -8.7 -3.79071 | gap 1, opp_overlap 1911487 1911486 1911482 1911481 1911490, overlap 1911487 1911490 GACGGAAGAGTAAAC T-TATTGGGCACCG CAA TGGTGCCCAGTACA TTTAGATATTGTAGA TERM 2495 1911490 - 1911512 + F 79 -12 -2.67958 | opp_overlap 1911487 1911486 1911482 1911481 1911490, overlap 1911487 1911487 GGAAGAGTAAACTTA TTGGGCACCG CAA TGGTGCCCAG TACATTTAGATATTG TERM 2496 1912367 - 1912390 + G 74 -3 -5.00616 | overlap 1912371 TCATTGCCGATTGAT GCTCGACTCC GCCG GGAGTGTGGC TTTTTTCCGCAGCCC TERM 2497 1912627 - 1912656 + G 78 -8.5 -4.2461 | opp_overlap 1912629, overlap 1912630 1912631 TGATGGCGCGTATGG AAGGCCCCATCGC TACC GCGATGGGGATTA TTTATTCCTGCGACT TERM 2498 1912630 - 1912653 + G 95 -12.4 -4.24413 | opp_overlap 1912629, overlap 1912627 1912631 TGGCGCGTATGGAAG GCCCCATCGC TACC GCGATGGGGA TTATTTATTCCTGCG TERM 2499 1912631 - 1912652 + G 100 -15.9 -3.13925 | opp_overlap 1912629, overlap 1912630 1912627 GGCGCGTATGGAAGG CCCCATCGC TACC GCGATGGGG ATTATTTATTCCTGC TERM 2500 1913253 - 1913265 + G 78 -9.1 -3.88577 | overlap 1913250 CCATTATGGCAACGT GTCGC CGA GCGAC TGTTTTACTTCTTCA cls 1911834 - 1913294 + | cardiolipin synthetase EcSMS35_1892 1913329 - 1913658 + | hypothetical protein TERM 2501 1913701 - 1913682 - T 100 -13.6 -4.56597 | opp_overlap 1913682 TTTCGGCGTGAAAAA GGGCTGAC AACT GTCAGCCC TTATTGTGTTTAAAG TERM 2502 1913682 - 1913701 + T 100 -13.6 -4.03586 | opp_overlap 1913682 TTTCGGCGTGAAAAA GGGCTGAC AACT GTCAGCCC TTATTGTGTTTAAAG oppF 1914715 - 1913711 - | oligopeptide ABC transporter, ATP-binding protein OppF TERM 2503 1913859 - 1913877 + g 93 -8.8 -4.95547 | GGCGACGGTAATTCC CCTTCCAG TAA CTGGATGG TTTTGTTCTTCTCCA oppD 1915725 - 1914712 - | oligopeptide ABC transporter, ATP-binding protein OppD oppC 1916642 - 1915737 - | oligopeptide ABC transporter, permease protein OppC TERM 2504 1916613 - 1916625 + g 100 -9.1 -5.1963 | TTCACTGAAATTTTC CAGCG TCT CGCTG TTTTTCTTACTTAAC oppB 1917580 - 1916660 - | oligopeptide ABC transporter, permease protein OppB TERM 2505 1916739 - 1916722 - G 74 -2.7 -4.93877 | overlap 1916730 1916733 TGGCATTAAACAAAA TGGTTAA AGCA CCAACCA GGATGGTCAGGCTTA TERM 2506 1917171 - 1917153 - G 70 -4.4 -4.5442 | opp_overlap 1917153, overlap 1917154 1917155 GGCGCAACCACAAAA CTGGGGAT AAC AACCCCGG TCATTGCCAGCCCCA TERM 2507 1917663 - 1917623 - R 80 -7 -4.87786 | gap 2, opp_overlap 1917631, overlap 1917624 1917628 1917630 GTAATGCGATAAAAA TCAGACACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTAT-TGC CATTAGTGCTTCACA TERM 2508 1917662 - 1917624 - R 77 -10.5 -3.51948 | gap 2, opp_overlap 1917631, overlap 1917623 1917628 1917630 TAATGCGATAAAAAT CAGACACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTAT-TG CCATTAGTGCTTCAC TERM 2509 1917659 - 1917628 - R 86 -12.4 -3.22077 | gap 1, opp_overlap 1917631, overlap 1917624 1917623 1917630 GCGATAAAAATCAGA CACCGTGGAGCAGGA CAC TCCTGCCCCAC-GTA TTGCCATTAGTGCTT TERM 2510 1917658 - 1917630 - R 100 -15.3 -3.16187 | opp_overlap 1917631, overlap 1917628 1917624 1917623 GATAAAAATCAGACA CCGTGGAGCAGGA CAC TCCTGCCCCACGT ATTGCCATTAGTGCT TERM 2511 1917631 - 1917657 + r 100 -16.6 -3.10464 | opp_overlap 1917630 1917628 1917624 1917623 ATAAAAATCAGACAC CGTGGAGCAGGA CAC TCCTGCCCCACG TATTGCCATTAGTGC oppA 1919342 - 1917666 - | oligopeptide ABC transporter, periplasmic oligopeptide-binding protein TERM 2512 1919475 - 1919497 + H 74 -7.8 -4.08557 | TATGTCGATTCGTAC TGTGTCTC CCCTGTC GAGACACA TTATTCTTTCACGAC EcSMS35_1899 1919581 - 1919877 + | hypothetical protein EcSMS35_1898 1920008 - 1919853 - | hypothetical protein TERM 2513 1920001 - 1920018 + g 77 -8.4 -4.05788 | opp_overlap 1920001, overlap 1920015 TAATGACGAAGTAAA CGGAGC ATGGCA GCTCCG TTTCATTTGAAAGGA TERM 2514 1920018 - 1920001 - G 74 -8.4 -3.98113 | opp_overlap 1920001 1920015 TAATGACGAAGTAAA CGGAGC ATGGCA GCTCCG TTTCATTTGAAAGGA TERM 2515 1920050 - 1920062 + r 70 -9.1 -3.15544 | opp_overlap 1920048 TTAATTAAGCAAGCC GGGGA AAA TCCCC TTAATACCAGTAACG EcSMS35_1900 1920682 - 1920035 - | MarC family integral membrane protein TERM 2516 1920988 - 1921010 + H 71 -7.8 -3.71687 | CACCTGGAAGTGACG CATTAGAGAT AAT AACTCTAATG TTTAAACTCTTTTAG TERM 2517 1923797 - 1923787 - g 77 -3.2 -5.09225 | overlap 1923790 ACTGCAGCGAAAAAA GAAG CCG CTCC GGCTAAAGCTGAGAA TERM 2518 1923800 - 1923790 - g 88 -8.2 -4.64763 | overlap 1923787 GCAGCGAAAAAAGAA GCCG CTC CGGC TAAAGCTGAGAAAAA adhE 1921159 - 1923834 + | aldehyde-alcohol dehydrogenase TERM 2519 1923830 - 1923817 - T 80 -4.5 -5.28826 | opp_overlap 1923817 AAAGCTGAGAAAAAA GCGAA GAAA TCCGC TTAATCAGTAGCGCT TERM 2520 1923861 - 1923878 + T 100 -10.5 -6.09196 | opp_overlap 1923861 GTCTGGCAACATAAA CGGTCCC TTCT GGGGCCG TTTTTTTGTTTTACC TERM 2521 1923878 - 1923861 - T 80 -8.3 -4.1891 | opp_overlap 1923861 GTCTGGCAACATAAA CGGTCCC TTCT GGGGCCG TTTTTTTGTTTTACC tdk 1924754 - 1924137 - | thymidine kinase EcSMS35_1903 1925138 - 1925266 + | hypothetical protein TERM 2522 1925694 - 1925680 - g 77 -7.1 -4.55128 | ACGGCGAAACTAAAA CCTGG ACTGG CCAGG GCCGTACTCCAGCTG EcSMS35_1904 1925358 - 1925771 + | H-NS histone family protein TERM 2523 1925793 - 1925823 + T 100 -15.6 -3.39668 | opp_overlap 1925800, overlap 1925800 GTAGATTGCACTTGC TTAAAAATCCCGCC ATC GGCGGGATTTTTTA TTGTCCGGTTTAAGA TERM 2524 1925816 - 1925800 - T 100 -13.7 -4.57569 | opp_overlap 1925793 1925800 GCACTTGCTTAAAAA TCCCGCC ATC GGCGGGA TTTTTTATTGTCCGG TERM 2525 1925800 - 1925816 + T 100 -13.7 -5.55769 | opp_overlap 1925800, overlap 1925793 GCACTTGCTTAAAAA TCCCGCC ATC GGCGGGA TTTTTTATTGTCCGG TERM 2526 1925868 - 1925889 + T 80 -10.1 -3.76224 | opp_overlap 1925868, overlap 1925887 TAAGCTATAAAAAAA CGGCGTCGA TTGC TCAACGCCG TTTCGTGGATAACAC TERM 2527 1925889 - 1925868 - T 100 -12.3 -5.66684 | opp_overlap 1925868 1925887 TAAGCTATAAAAAAA CGGCGTCGA TTGC TCAACGCCG TTTCGTGGATAACAC galU 1926824 - 1925916 - | UTP-glucose-1-phosphate uridylyltransferase TERM 2528 1926200 - 1926212 + g 71 -3.3 -4.77757 | TAGCGAGATTAGACG GCGCA ACA TCCGC TTTTGGTTTTTCAAC EcSMS35_1906 1928039 - 1927026 - | response regulator receiver domain-containing protein EcSMS35_1907 1929075 - 1928131 - | patatin family phospholipase EcSMS35_1908 1929128 - 1929607 + | SecC motif-containing protein TERM 2529 1930454 - 1930466 + G 77 -6.9 -4.44448 | ACTCTACAAAGTACT GGCGC AGC GCGTC TTTGTTTACGGTAAT purU 1929657 - 1930499 + | formyltetrahydrofolate deformylase TERM 2530 1930993 - 1930975 - T 76 -8.8 -3.92075 | overlap 1930976 AGCGCCAGCGAGAAA GCGTTGCC GCA GGCAACGA TCCGAAGGGTGAAGC TERM 2531 1930992 - 1930976 - T 82 -12.3 -2.94924 | overlap 1930975 GCGCCAGCGAGAAAG CGTTGCC GCA GGCAACG ATCCGAAGGGTGAAG TERM 2532 1931202 - 1931187 - T 100 -8.2 -5.60993 | opp_overlap 1931187 GTGCCCATAAAAAAA CCCCGC CGAA GCAGGG TCTATGTGAACTAAA narI 1931901 - 1931224 - | respiratory nitrate reductase 1, gamma subunit narJ 1932611 - 1931901 - | nitrate reductase molybdenum cofactor assembly chaperone 1 TERM 2533 1932474 - 1932500 + g 73 -9.5 -3.5771 | opp_overlap 1932479, overlap 1932466 1932477 CGTTAAATCGCGCAG GAAAATGCCCA GCGCA TGGGCATCTTC TTTCGACAGATTTTT TERM 2534 1932495 - 1932479 - G 76 -8 -4.25848 | opp_overlap 1932477 1932474 1932466 AATCGCGCAGGAAAA TGCCCA GCGCA TGGGCA TCTTCTTTCGACAGA narH 1934146 - 1932608 - | nitrate reductase 1, beta subunit TERM 2535 1934049 - 1934063 + g 75 -5.6 -4.60041 | TATTCCACGCCTTCG CGGCTG GTC CAGACG TTTTTACAGGTAACT narG 1937886 - 1934143 - | nitrate reductase 1, alpha subunit TERM 2536 1934831 - 1934867 + g 81 -9.6 -4.09243 | gap 2 TTGTAAGAAACGTGT TCATCTTCCAGGCCAGAC CAT GTCGGGC-TGG-AGATGA TTTTGCGCGGCTGTG TERM 2537 1935485 - 1935472 - G 72 -6.7 -4.1552 | CAGCGGGTGAATAAA CGGAT GCAT ATCCG AAGTATTCATGTCGT TERM 2538 1937600 - 1937619 + g 76 -10.6 -3.32769 | opp_overlap 1937580, overlap 1937594 CAGGAGTAGCTGGCA CCGCGCGG GCAG CCGCGAGG TTCATGGTTTGGCAG TERM 2539 1938256 - 1938238 - R 100 -12.4 -5.64274 | TGACGCATAAAAAAA GCGCGACA TCA TGCCGCGC AAAGGATAATCAAAT narK 1939671 - 1938280 - | nitrite extrusion protein 1 TERM 2540 1939485 - 1939475 - G 81 -6.8 -4.67038 | opp_overlap 1939475 GTCGTAAAATTAAAA CCGA CTT TCGG TAAGTTCACCGCAAC EcSMS35_1917 1939984 - 1939766 - | hypothetical protein TERM 2541 1939804 - 1939822 + g 75 -5.4 -4.60487 | opp_overlap 1939819, overlap 1939806 TAGTGAGTACAGTGA TTTCATAA AAA TTATGAGA TTTTTCACGGTGCTG TERM 2542 1941043 - 1941067 + G 79 -12.1 -3.04792 | AGTACGGTATTTTGC TGGCGACCCTG CCG CAGGGGCGTCA TCTTAGCCATGATCA TERM 2543 1941225 - 1941250 + G 74 -8.3 -3.92542 | TCTATTGCCCAATCT CTCTCTTGCAT GAAG ATGCAGGTGAG TTGTTTACAGATGCA TERM 2544 1941732 - 1941755 + G 70 -6 -4.15044 | gap 1, opp_overlap 1941732 CGCCGTCGTGAATCA GGTGGC-ACCG AAG TGGTTGTCACC TTTATTCCCGAAAAA narX 1940010 - 1941806 + | nitrate/nitrite sensor protein NarX narL 1941799 - 1942449 + | nitrate/nitrite response regulator protein NarL EcSMS35_1920 1943844 - 1942450 - | putative invasin EcSMS35_1921 1944029 - 1944382 + | dsrE family protein EcSMS35_1922 1945121 - 1944426 - | chaC protein TERM 2545 1945166 - 1945178 + r 71 -4.1 -4.7871 | GCGACAACTTTTTGG TGTCT TCC GGACA TTTTTACTGCTCATT EcSMS35_1923 1945509 - 1945279 - | chaB protein TERM 2546 1945368 - 1945389 + g 72 -6.5 -4.30253 | overlap 1945371 GCGCGGTTTCTTCGC GACTGGCGT CATC ACGCCGATC TTCTTTATCTTTATA EcSMS35_1924 1945779 - 1946879 + | calcium/proton antiporter TERM 2547 1947218 - 1947177 - f 91 -10.1 -4.78848 | gap 1, opp_overlap 1947176, overlap 1947213 1947214 GCTGGAAAGAGAAAA CCCCCGCAC-GTTGAGAGGT AAA ACCTGACAACAGAACGGGGG CTAATCTTGAACCAT EcSMS35_1925 1947258 - 1947392 + | hypothetical protein TERM 2548 1947436 - 1947401 - f 74 -7.5 -4.21768 | gap 1, overlap 1947429 GAAGTAAGGTGAAAA CGGGCGTCAGGCTGCC GTGAT GGCAATATG-CGCCCG AAACCGGCCGCAGGG TERM 2549 1947441 - 1947468 + F 100 -9.8 -5.26155 | opp_overlap 1947429 1947440 1947441, overlap 1947442 ATATGCGCCCGAAAC CGGCCGCAGG GGTAACAG CCTGCGGCCC TTTTTGTCTTTATCT TERM 2550 1947442 - 1947467 + F 100 -13.3 -3.73253 | opp_overlap 1947429 1947441 1947440, overlap 1947441 TATGCGCCCGAAACC GGCCGCAGG GGTAACAG CCTGCGGCC CTTTTTGTCTTTATC TERM 2551 1947754 - 1947713 - f 91 -10.1 -4.78848 | gap 1, opp_overlap 1947712, overlap 1947749 1947750 GCTGGAAAGAGAAAA CCCCCGCAC-GTTGAGAGGT ACA ACCTGACAACAGAACGGGGG CTAATCTTGAACCAG EcSMS35_1926 1947793 - 1947927 + | hypothetical protein TERM 2552 1947971 - 1947936 - T 74 -7.5 -4.21768 | gap 1, overlap 1947964 GAAGTAAGGTGAAAA CGGGCGTCAGGCTGCC GTGAT GGCAATATG-CGCCCG AAACCGGCCGCAGAG TERM 2553 1947977 - 1948002 + T 100 -9.7 -5.36441 | gap 1, opp_overlap 1947964 1947976 1947975 TATGCGCCCGAAACC GGCCGCAGAGGT AAT AGC-CTGCGGCC TTTTTTGTATCCGGC TERM 2554 1948031 - 1948053 + T 80 -6.3 -4.85782 | opp_overlap 1948031 GCACCCATGAAAAAA GTCTTAACG CAGAA CGCTAAGAC TTTATTTTTCAAGCA TERM 2555 1948053 - 1948031 - T 93 -9.2 -5.1675 | opp_overlap 1948031 GCACCCATGAAAAAA GTCTTAACGC AGA ACGCTAAGAC TTTATTTTTCAAGCA kdsA 1948930 - 1948076 - | 3-deoxy-8-phosphooctulonate synthase sirB1 1949775 - 1948966 - | sirB1 protein TERM 2556 1949483 - 1949466 - G 78 -5.5 -4.79352 | CGACCCATAATAAAA CGGCACC TAAT GATACCG CACTGCCCTGTCGAT EcSMS35_1929 1950171 - 1949779 - | putative invasion gene expression up-regulator SirB TERM 2557 1950185 - 1950201 + r 76 -10.1 -3.31792 | ATTGATAATAGCGGC CGAGCGT TAC GCGCTCG TTATCACCATAGTCC hemK 1951001 - 1950168 - | protein-(glutamine-N5) methyltransferase, release factor-specific prfA 1952083 - 1951001 - | peptide chain release factor 1 TERM 2558 1951216 - 1951228 + g 70 -6.2 -4.24002 | GACGGGTAGACGCTT CGGC CTGTT GCCG TTTTGCCATTTCAGC hemA 1953381 - 1952125 - | glutamyl-tRNA reductase TERM 2559 1953992 - 1953967 - g 73 -9.1 -3.5882 | opp_overlap 1953965 GAGATGATTGGCAAA TTGACCGGAAT GCCG ATTCCGCTCAA CAGTTTGCGCCAGTG lolB 1953595 - 1954218 + | outer membrane lipoprotein LolB ispE 1954218 - 1955069 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 2560 1955089 - 1955103 + F 78 -10 -3.62522 | GGCAAGCTGAGTTTC GGTGAC AAC GTCACC TTGTTCCAGACGTTG prs 1955154 - 1956167 + | ribose-phosphate pyrophosphokinase TERM 2561 1956186 - 1956199 + F 100 -9.5 -5.76633 | opp_overlap 1956184 1956186 AACCCGGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2562 1956199 - 1956186 - f 74 -9.5 -3.34894 | opp_overlap 1956186, overlap 1956184 AACCCGGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA ychM 1956292 - 1957971 + | sulfate permease TERM 2563 1958009 - 1957980 - T 75 -10.8 -2.87963 | overlap 1957998 TTTATAAGTACGAGA TTGACCAGTCAG AGCAAA CTGACTGGTCAG TAAACTGCAGTATTT EcSMS35_1937 1958304 - 1958026 - | hypothetical protein TERM 2564 1958496 - 1958512 + H 74 -2.2 -5.24129 | CAATTATTGCGTTAT CTGCAT TTGAT ACGCAG TTTTTTGTCAAGCGG pth 1958582 - 1959166 + | peptidyl-tRNA hydrolase TERM 2565 1959744 - 1959733 - g 72 -5.8 -4.38927 | CGCGTACAGAAGAAA GCCA AAGG TGGC GATAAAGACGCGAAA TERM 2566 1959818 - 1959804 - g 70 -7.1 -4.11216 | GCCCCAGCTGGAAAA CGCAG GTATG CTGCG CGCGCTGGATTTAAG engD 1959283 - 1960374 + | GTP-binding protein EngD TERM 2567 1960408 - 1960434 + T 100 -11.7 -5.03715 | opp_overlap 1960405 1960408 GGCGGTTAATAACGA GCCATTATGTG AGTTG CACGTAATGGC TTTTTTACGCCTGCT TERM 2568 1960434 - 1960408 - T 70 -9.5 -2.93073 | opp_overlap 1960408, overlap 1960405 GGCGGTTAATAACGA GCCATTATGTG AGTTG CACGTAATGGC TTTTTTACGCCTGCT TERM 2569 1960785 - 1960750 - T 74 -9.8 -3.29096 | overlap 1960754 GCTATTAATTAGCAA TTCATAGCGGGAAAGT ACAT ACTCTCCCGCTATCCA CGGCGCTTAAACTGC TERM 2570 1960781 - 1960754 - T 89 -15 -2.58767 | overlap 1960750 TTAATTAGCAATTCA TAGCGGGAAAGT ACAT ACTCTCCCGCTA TCCACGGCGCTTAAA dhaR 1962698 - 1960779 - | PTS-dependent dihydroxyacetone kinase operon regulatory protein DhaR TERM 2571 1961451 - 1961439 - G 72 -6.9 -4.15788 | AATCTTTTCAAGAAA CAGCG TGC CGCCG TGCGCCAGTTCCAGC TERM 2572 1961817 - 1961805 - G 79 -4.7 -4.90302 | opp_overlap 1961805 GAGCAACAAAATAAA GCTGG TTC CCTGC GTTTCTATTATCGGT TERM 2573 1962811 - 1962791 - H 81 -9.9 -4.01902 | opp_overlap 1962791 1962790 1962793 ACATTCATTAAAGAA TATGTTTCA CTA TGAAACATA ATTTGGGCTAATTTT dhaK 1962926 - 1963996 + | PTS-dependent dihydroxyacetone kinase, DhaK subunit TERM 2574 1964591 - 1964535 - g 73 -9.4 -3.5774 | gap 1, opp_overlap 1964534 1964570, overlap 1964526 ATGCAAGCCCGCAAA GGCCGCGCCAGTTATCTCGGTGAAC GCAGTATT GGTCACCAGGATC-CCGGCGCGACC TCGGTGATGTTTATG dhaL 1964007 - 1964639 + | PTS-dependent dihydroxyacetone kinase, DhaL subunit TERM 2575 1965163 - 1965178 + G 74 -8.2 -4.00066 | overlap 1965162 GGCCTGCATGTACGT CCGGCC TCCC GGCTGG TTTATACCTTATCGA dhaM 1964650 - 1966068 + | PTS-dependent dihydroxyacetone kinase, DhaM subunit TERM 2576 1966076 - 1966107 + F 70 -9.6 -2.90078 | gap 1, opp_overlap 1966070 1966073, overlap 1966075 AGGGTTAAACCACCG T-TCGGATGGCATCA TTC TGATGTCATCCGGCA ATTTACTCTGCACTG EcSMS35_1944 1966095 - 1966208 + | hypothetical protein EcSMS35_1945 1966400 - 1966227 - | hypothetical protein treA 1966387 - 1968084 + | alpha,alpha-trehalase TERM 2577 1968082 - 1968064 - fH 79 -3 -5.45802 | opp_overlap 1968066, overlap 1968066 CCGCTAAAACAAAAA GAGGCGGA ACC TACGCCTT AACTTTACTGTATAT TERM 2578 1968080 - 1968066 - fH 70 -5.6 -4.3613 | opp_overlap 1968066, overlap 1968064 GCTAAAACAAAAAGA GGCGGA ACC TACGCC TTAACTTTACTGTAT TERM 2579 1968099 - 1968135 + FH 70 -6.7 -4.15044 | ACTTTACTGTATATC GAGCAATGCCATT ACATGCATAAA ATTGGCATTGCTC TTTCTTCACCACGAA TERM 2580 1968365 - 1968390 + FH 72 -5.5 -4.48987 | overlap 1968366 CAAACATGATCTTTT TCGCTATATGT GTAA GTATATAGCGG TTTTAATTATCAGGA EcSMS35_1947 1968414 - 1969436 + | iron(III) ABC transporter, periplasmic iron(III)-binding protein TERM 2581 1969575 - 1969558 - g 88 -8.5 -4.63218 | opp_overlap 1969557 TCTTCGTCAAGAAAA TGTTCCT GTGC AGGAACA AATTGTCTTCTGGCA EcSMS35_1948 1969436 - 1970416 + | iron(III) ABC transporter, permease protein TERM 2582 1970649 - 1970677 + G 74 -2.4 -5.1166 | gap 2, opp_overlap 1970620, overlap 1970621 GCGCGCGCAGGCTAT TGCC-T-GGGTGCC GCA GGCGCACGACGGCA TTTTTGCTTTTAGTG EcSMS35_1949 1970413 - 1971171 + | iron(III) ABC transporter, ATP-binding protein EcSMS35_1950 1971181 - 1971993 + | putative methyltransferase modD 1971990 - 1972844 + | modD protein TERM 2583 1973678 - 1973650 - g 72 -4.6 -4.59511 | gap 1 AATAGTGGTCAAAAA TCACGCTACTGGC AGTG GCCAG-AGTATGA CAAAGAAAGTTTTTA TERM 2584 1973824 - 1973812 - g 100 -4.7 -5.93252 | opp_overlap 1973812 TTGAAAAATAAAAAA GGCAG CTA CAGCC ATTATTCCGATTACA TERM 2585 1974695 - 1974676 - g 71 -2.7 -4.83615 | overlap 1974677 GACGGTTCACAAAAA GCCGCCG GTTTTG CGGTGAC CCACATTCGAGCCGA EcSMS35_1952 1972870 - 1974840 + | TonB-dependent receptor TERM 2586 1974847 - 1974878 + T 74 -9.4 -3.33583 | opp_overlap 1974848, overlap 1974848 ACGTTCTGATGTGAA AGCGGATAGCGGCA TCTG TATCGCTATCCGCC TTATGAAAATCTTAT TERM 2587 1974877 - 1974848 - T 100 -12.9 -3.59979 | opp_overlap 1974848 1974847 CGTTCTGATGTGAAA GCGGATAGCGGCA TCTG TATCGCTATCCGC CTTATGAAAATCTTA TERM 2588 1974848 - 1974877 + T 84 -12.9 -2.59668 | opp_overlap 1974848, overlap 1974847 CGTTCTGATGTGAAA GCGGATAGCGGCA TCTG TATCGCTATCCGC CTTATGAAAATCTTA EcSMS35_1953 1975144 - 1974890 - | transglycosylase-associated protein EcSMS35_1954 1975345 - 1976079 + | putative type IV pilus assembly protein PilZ TERM 2589 1976073 - 1976059 - T 80 -5.6 -5.03145 | GAAGCCCGGAAAAAA GCGGAC AAA GTGCGC GACTGATTTACATCG mltE 1976692 - 1976081 - | membrane-bound lytic murein transglycosylase E ldcA 1976792 - 1977706 + | muramoyltetrapeptide carboxypeptidase cvrA 1977801 - 1979537 + | cell volume regulation protein A TERM 2590 1981492 - 1981471 - g 70 -4.5 -4.58395 | gap 1, opp_overlap 1981474 TTGAGTCTGGAAAAA CAACAGGACT CGC AG-CCTGTTA ATCAACAATCTGAAC EcSMS35_1958 1980286 - 1981593 + | hypothetical protein TERM 2591 1981654 - 1981628 - T 93 -12.5 -3.53224 | opp_overlap 1981630 CAGGTTCCGGGGAAA TAGTGTCCATT CTTTT AATGGACACTA TCATGGGCAATGGCT TERM 2592 1981630 - 1981652 + T 74 -10.7 -2.78816 | opp_overlap 1981628 GGTTCCGGGGAAATA GTGTCCATT CTTTT AATGGACAC TATCATGGGCAATGG alr1 1982833 - 1981763 - | alanine racemase dadA 1984147 - 1982843 - | D-amino acid dehydrogenase, small subunit TERM 2593 1985060 - 1985048 - g 84 -4.1 -5.25803 | AACGCCCACAAAAAA TCTCG CTG CAAGA GGAGAAAGCCCGGCA EcSMS35_1961 1984471 - 1986003 + | SpoVR family protein TERM 2594 1986012 - 1986037 + T 76 -6.1 -4.56597 | opp_overlap 1986017, overlap 1986017 TCTGTAAAAACAACA AAAAACCCCTC GTTT GAGGGGTTTGC TTTTTAAACGGAAGG TERM 2595 1986017 - 1986032 + T 87 -10.4 -4.32046 | opp_overlap 1986017, overlap 1986012 AAAAACAACAAAAAA CCCCTC GTTT GAGGGG TTTGCTTTTTAAACG TERM 2596 1986032 - 1986017 - T 100 -10.4 -5.80727 | opp_overlap 1986012 1986017 AAAAACAACAAAAAA CCCCTC GTTT GAGGGG TTTGCTTTTTAAACG fadR 1986774 - 1986055 - | fatty acid metabolism transcriptional regulator FadR TERM 2597 1987442 - 1987475 + G 76 -3.7 -5.00846 | gap 1 TCCTCGATGCCTTAA CCGTC-GTGGCGGTGG TGA TCAGCGTCGCAGTCGG TTTTTATGGTATTTA nhaB 1986997 - 1988538 + | Na+/H+ antiporter NhaB TERM 2598 1988572 - 1988545 - f 79 -9.8 -3.79113 | opp_overlap 1988543 1988549, overlap 1988549 ACGCTTTGATAACAA CTTACCGGGCAT ATAA ATGCCCGGTTTG CCTTTTCGCCCGATA TERM 2599 1988549 - 1988568 + F 100 -13.6 -3.92659 | opp_overlap 1988545 1988549, overlap 1988543 TTTGATAACAACTTA CCGGGCAT ATAA ATGCCCGG TTTGCCTTTTCGCCC TERM 2600 1988568 - 1988549 - f 86 -13.6 -2.68806 | opp_overlap 1988549 1988543, overlap 1988545 TTTGATAACAACTTA CCGGGCAT ATAA ATGCCCGG TTTGCCTTTTCGCCC TERM 2601 1989057 - 1989090 + G 81 -4.5 -5.1287 | gap 1, overlap 1989057 1989060 TGCCGCAAGTGTTTG TCGCCTCTGGCGATTG TGC CGAGCGTCAGTGG-GA TTTTTTAGGTCTGGA dsbB 1988684 - 1989214 + | disulfide bond formation protein DsbB TERM 2602 1989223 - 1989240 + T 100 -12.7 -5.14965 | opp_overlap 1989219 TCGCTAATCCATTCA GCGCTCC TGCG GGAGCGC TTTTTTCCTGCCGCT umuC 1990528 - 1989260 - | protein UmuC umuD 1990947 - 1990528 - | protein UmuD sheA 1991319 - 1992230 + | silent hemolysin SheA EcSMS35_1968 1992898 - 1992437 - | hypothetical protein EcSMS35_1969 1993634 - 1992975 - | fumarylacetoacetate hydrolase family protein EcSMS35_1970 1993999 - 1993706 - | hypothetical protein EcSMS35_1971 1994242 - 1994643 + | pre-peptidase C-terminal domain-containing protein TERM 2603 1994669 - 1994655 - T 77 -11.4 -2.56046 | overlap 1994646 1994645 1994640 GTAAATGTCAACCGA CGGGGA CTC TCCCCG TCATAAACGTTAACG EcSMS35_1972 1995114 - 1994746 - | putative fels-1 prophage protein TERM 2604 1995961 - 1995946 - g 74 -2.4 -5.04222 | overlap 1995948 GAAGGAAAGGAAAAA GCGCCG CGTC CAGCTC CCGCACCGCAGGCTC minC 1995634 - 1996329 + | septum site-determining protein MinC minD 1996353 - 1997165 + | septum site-determining protein MinD minE 1997169 - 1997435 + | cell division topological specificity factor MinE TERM 2605 1997460 - 1997487 + T 100 -15 -4.72986 | overlap 1997461 AAAAGCGCATTTATC TTCAAGGCAGAG TCAT CTCTGCCTTGAG TTTTTCATCCCCCTC TERM 2606 1997461 - 1997486 + T 100 -16.3 -3.4331 | overlap 1997460 AAAGCGCATTTATCT TCAAGGCAGAG TCAT CTCTGCCTTGA GTTTTTCATCCCCCT TERM 2607 1997705 - 1997724 + T 91 -7 -5.40072 | overlap 1997706 CCATAGGATGAGGTT TCCCGCCG TAAC TGGCGGGC TTTTTTTGCCGCAGA TERM 2608 1997706 - 1997723 + T 80 -10.5 -3.83561 | overlap 1997705 CATAGGATGAGGTTT CCCGCCG TAAC TGGCGGG CTTTTTTTGCCGCAG TERM 2609 1997786 - 1997771 - T 77 -6.8 -4.54727 | opp_overlap 1997771 CCCTGTAAACGAAAA CTACGC CGAA GCGCAG TTTAATCGTTGATGG EcSMS35_1976 1998128 - 1997802 - | hypothetical protein TERM 2610 1998420 - 1998406 - H 74 -3.6 -5.07652 | opp_overlap 1998418 GTCGGCAAAATAAAA TGACTA ATG TAATCA TTGCTGATGAATATT EcSMS35_1977 1998546 - 1998719 + | hypothetical protein TERM 2611 1998945 - 1998930 - g 72 -4.7 -4.62069 | CCGCGACGGTAAAAA TGCAC GTAAAG GTGCA AAAGTGGGTGCCGCC EcSMS35_1978 1998721 - 1999065 + | hypothetical protein EcSMS35_1979 1999075 - 1999404 + | hypothetical protein TERM 2612 1999419 - 1999441 + T 100 -17.8 -5.1101 | ATATTTCATATGTTA CCGCGTCGAT GAA ATCGACGCGG TTTTTTAGCTAATGG EcSMS35_1980 2001783 - 1999462 - | autotransporter (AT) family porin TERM 2613 2000017 - 2000034 + g 82 -3.4 -5.20216 | gap 1, overlap 2000008 GCTATATTGCGCCCA GGCGTCA ATGTA TG-CGCC TTTTTTACTGATGTC TERM 2614 2001059 - 2001045 - G 79 -4.2 -5.15167 | TATTATTAATAAAAA CATCTG CAG CCGATG ATACCTCACTATCCG EcSMS35_1981 2002393 - 2002274 - | hypothetical protein EcSMS35_1982 2002728 - 2002510 - | hypothetical protein EcSMS35_1983 2004320 - 2002860 - | cyclic diguanylate phosphodiesterase domain-containing protein TERM 2615 2003605 - 2003593 - G 70 -4.8 -4.57837 | ACAGGTTGGTAAAAA GGGA CGATC TCCC CATTATTTATAGCCC TERM 2616 2004570 - 2004617 + r 100 -26.7 -3.03007 | opp_overlap 2004573 2004584, overlap 2004584 AAATTAGGCGGGATA TCAGGTGTCAAGAATGGAGAG CGAGAA CTCTCCATTCTTGGCACCTGA TATTGCGGACATATT TERM 2617 2004614 - 2004573 - R 100 -21.1 -2.62616 | opp_overlap 2004570 2004584, overlap 2004584 TTAGGCGGGATATCA GGTGTCAAGAATGGAGAGC GAGA ACTCTCCATTCTTGGCACC TGATATTGCGGACAT TERM 2618 2004603 - 2004584 - R 72 -8.6 -3.62775 | opp_overlap 2004584 2004570, overlap 2004573 ATCAGGTGTCAAGAA TGGAGAGC GAGA ACTCTCCA TTCTTGGCACCTGAT EcSMS35_1984 2004891 - 2004715 - | hypothetical protein EcSMS35_1985 2005342 - 2005076 - | hypothetical protein EcSMS35_1986 2006236 - 2007447 + | BLUF/cyclic diguanylate phosphodiesterase domain-containing protein TERM 2619 2007566 - 2007601 + F 75 -9.3 -3.70109 | CTGAAATCTTATTTA TACTTTGTACAATTT TAGCGT ATATTGTACAAAGTA TTATTGGGTCGTGTA mlrA 2007652 - 2008383 + | transcriptional regulator mlrA TERM 2620 2008949 - 2008937 - g 70 -5.5 -4.3953 | GTTAATCATAACAAA CGCAG TTA CTACG CCATTGATAATACGC EcSMS35_1988 2008604 - 2009008 + | hypothetical protein TERM 2621 2009248 - 2009222 - T 76 -6.5 -4.46757 | opp_overlap 2009226, overlap 2009226 AACATATTTATAAAA CCAACGGGCGT GCCAT ACGCCCGTTTC AATACTTAACGCACA TERM 2622 2009244 - 2009226 - T 93 -11.7 -3.76186 | opp_overlap 2009226, overlap 2009222 TATTTATAAAACCAA CGGGCGT GCCAT ACGCCCG TTTCAATACTTAACG TERM 2623 2009226 - 2009244 + T 100 -12.4 -3.71527 | opp_overlap 2009226 2009222 TATTTATAAAACCAA CGGGCGTG CCA TACGCCCG TTTCAATACTTAACG TERM 2624 2009603 - 2009617 + T 80 -4.4 -5.20328 | opp_overlap 2009595 2009603, overlap 2009595 ATATAGATAATGACA TTAATT TTT AATTAA TTTATTTTTTTGGGA TERM 2625 2010114 - 2010090 - T 93 -10 -5.05113 | opp_overlap 2010093, overlap 2010093 TCCACATAAATAAAA CAACGGGCGT GTTAT ACGCCCGTTT CAATATTTAACACAT TERM 2626 2010093 - 2010111 + T 100 -12.4 -3.81137 | opp_overlap 2010090 2010093 ACATAAATAAAACAA CGGGCGTG TTA TACGCCCG TTTCAATATTTAACA TERM 2627 2010111 - 2010093 - T 100 -11.7 -4.60302 | opp_overlap 2010093, overlap 2010090 ACATAAATAAAACAA CGGGCGT GTTAT ACGCCCG TTTCAATATTTAACA icd 2011387 - 2010137 - | isocitrate dehydrogenase, NADP-dependent TERM 2628 2011611 - 2011599 - g 77 -2.7 -5.11613 | overlap 2011600 ATACCATGCAAAAAA CTTCT TTT AGAAA TCACCAGGTTAAGCG rluE 2011589 - 2012212 + | ribosomal large subunit pseudouridine synthase E EcSMS35_1991 2012222 - 2012683 + | NUDIX family hydrolase TERM 2629 2012709 - 2012686 - f 70 -6 -4.18018 | gap 1, opp_overlap 2012680 GGGTGTCATCTAAAA GGCTGCGTGAT AGA AT-ACGCCGCC TTGAAGTTCAATGTC TERM 2630 2012827 - 2012841 + G 72 -7.8 -3.86346 | opp_overlap 2012829 CAACAACAGGGATAT CAGGTC GAA GGCCTG TTTATGAAGAACTGG trmU 2012737 - 2013843 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2631 2014019 - 2014038 + G 72 -5.7 -4.56597 | gap 1, opp_overlap 2014019, overlap 2014019 TATTATCGATATGAA CC-CCAGC TCAAC GCTGGCGG TTTTTGGCGGCAGCG EcSMS35_1993 2013879 - 2014520 + | hypothetical protein TERM 2632 2015525 - 2015505 - g 74 -8.3 -3.90588 | opp_overlap 2015493 CACCTGGCAAGCAAA CTGCCAG TTTCCCG CTGGCAG CGTGACCTGACCGAC purB 2014524 - 2015894 + | adenylosuccinate lyase TERM 2633 2015902 - 2015933 + F 87 -11.6 -3.6968 | gap 1, opp_overlap 2015897, overlap 2015897 2015903 2015906 TGAAATAAACTCGTA TCAGTGCCGGATAGC GAT GCTGTCCGGC-CTGC TTATTAAGATTATCC TERM 2634 2015903 - 2015932 + F 89 -15.1 -2.81326 | gap 1, opp_overlap 2015897, overlap 2015897 2015902 2015906 GAAATAAACTCGTAT CAGTGCCGGATAGC GAT GCTGTCCGGC-CTG CTTATTAAGATTATC TERM 2635 2015906 - 2015930 + F 80 -12.1 -2.94759 | opp_overlap 2015897, overlap 2015897 2015903 2015902 ATAAACTCGTATCAG TGCCGGATAGC GAT GCTGTCCGGCC TGCTTATTAAGATTA phoP 2016063 - 2016734 + | DNA-binding response regulator PhoP TERM 2636 2017585 - 2017575 - g 77 -8.2 -4.13014 | CCCATAGTCTGAAAA CGCC ACT GGCG GTGCTGCAAAGTACG phoQ 2016734 - 2018194 + | sensor histidine kinase PhoQ EcSMS35_1997 2018270 - 2019391 + | cupin family protein TERM 2637 2019406 - 2019432 + TF 100 -15.2 -4.32201 | opp_overlap 2019404, overlap 2019407 AGTTTGGATTTAAGC CGGATGCGGCAT CAC ATGCCGCATCCC TTTTCGCTTACTTCC TERM 2638 2019407 - 2019431 + TF 100 -18.7 -3.18598 | opp_overlap 2019404, overlap 2019406 GTTTGGATTTAAGCC GGATGCGGCAT CAC ATGCCGCATCC CTTTTCGCTTACTTC pepT 2020708 - 2019440 - | peptidase T TERM 2639 2019848 - 2019865 + gF 71 -7.7 -3.78775 | gap 1 GATGTAGTGCATATC GGC-CCGT TCA ACGGTGCC TTTCATGCTCGCCAG EcSMS35_1999 2020686 - 2020937 + | hypothetical protein potA 2020916 - 2022052 + | spermidine/putrescine ABC transporter, ATP-binding protein potB 2022036 - 2022893 + | spermidine/putrescine ABC transporter, permease protein PotB potC 2022890 - 2023684 + | spermidine/putrescine ABC transporter, permease protein PotC potD 2023681 - 2024727 + | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein TERM 2640 2024759 - 2024736 - f 72 -9.5 -3.22091 | opp_overlap 2024737, overlap 2024737 ACGTTAATTCAGCAA GCGGGCGGT GGTATT ACCGCCCGT TTTTTATTTAGCAAG TERM 2641 2024758 - 2024737 - f 84 -13 -2.52933 | opp_overlap 2024737, overlap 2024736 CGTTAATTCAGCAAG CGGGCGGT GGTATT ACCGCCCG TTTTTTATTTAGCAA TERM 2642 2024737 - 2024758 + F 100 -13.7 -5.63517 | opp_overlap 2024737 2024736 CGTTAATTCAGCAAG CGGGCGGTG GTAT TACCGCCCG TTTTTTATTTAGCAA EcSMS35_2004 2024785 - 2025246 + | hypothetical protein EcSMS35_2005 2025243 - 2026031 + | hypothetical protein npdA 2026990 - 2026169 - | NAD-dependent deacetylase TERM 2643 2026923 - 2026912 - G 82 -2.2 -5.41143 | overlap 2026914 2026916 TATCTCTGAAAAAAA TACG CTGA CGCA AACGCTCGCGCAGGC TERM 2644 2026926 - 2026942 + g 81 -5.8 -4.85782 | gap 1, opp_overlap 2026916 2026914 2026926 ATACGCTGACGCAAA CGCTCGC GCAG GCG-GCG TTTATTTTTACGAAA nagK 2027917 - 2027006 - | N-acetylglucosamine kinase lolE 2029190 - 2027946 - | lipoprotein releasing system, transmembrane protein LolE lolD 2029891 - 2029190 - | lipoprotein releasing system, ATP-binding protein lolC 2031083 - 2029884 - | lipoprotein-releasing system transmembrane protein LolC TERM 2645 2030259 - 2030247 - G 84 -10.5 -3.72051 | GGTAATAATGTTAAA CGCCG CAA CGGCG ACAATCAGGCTCAGC TERM 2646 2030353 - 2030366 + g 90 -8.1 -4.77157 | overlap 2030363 CAGTCCTGCCATTTG CTGCC TTCA GGCAG TTTTTGCTGACTTAA TERM 2647 2031999 - 2032014 + G 78 -9 -4.0031 | opp_overlap 2031983, overlap 2031984 AGGTGCCGTTGCGCC GCCATC TGCT GATGGC TTCTTTGCTGACCGT EcSMS35_2011 2031344 - 2032417 + | putative acyltransferase TERM 2648 2032422 - 2032439 + F 90 -12.7 -3.30701 | opp_overlap 2032422 ACTCCCGCTAAGCCA TCGCCCC AGCC GGGGCGA TTCAATTTGCTAAAC TERM 2649 2032439 - 2032422 - f 81 -12.7 -2.52543 | opp_overlap 2032422 ACTCCCGCTAAGCCA TCGCCCC AGCC GGGGCGA TTCAATTTGCTAAAC TERM 2650 2033667 - 2033649 - g 93 -5.9 -5.20333 | opp_overlap 2033648 CAGGCACAACAAAAA GCACCGC TGGAT GCGCTGC GTAAGTTCCTCGAGT TERM 2651 2035029 - 2035017 - g 70 -6.9 -4.01564 | GAAAACATCCAGAAA GCCGC CGA ACGGC TGGCAGAACTGGTGC mfd 2032545 - 2035991 + | transcription-repair coupling factor EcSMS35_2013 2036139 - 2037098 + | LysM/ErfK/YbiS/YcfS/YnhG family protein TERM 2652 2037141 - 2037115 - T 100 -18.8 -5.60993 | TCCTGGATAAAAAAA TCCCCGCGACAC GGC ATGTCGCGGGGA AAAAATCAGCAGTAG EcSMS35_2014 2037437 - 2037180 - | hypothetical protein TERM 2653 2037415 - 2037404 - G 70 -5.8 -4.15006 | opp_overlap 2037407 ACATTGAGCTTAAAA TCGC CGCA GCGA TGAGGGTTTTTACGT TERM 2654 2037722 - 2037712 - g 100 -2.4 -5.77853 | AATGTGTAAAAAAAA GCCG TGG CCGC CCAAAAGTGTTCGAC EcSMS35_2015 2037678 - 2038310 + | TetR family transcriptional regulator TERM 2655 2038349 - 2038323 - T 100 -10.1 -5.43866 | opp_overlap 2038323 TAAGGCGCAAAAAAA GCCCCTCAGCC TGAGC GAATGAGGGGC TAAATTGCAGAGTAC EcSMS35_2016 2038911 - 2038372 - | surface antigen domain-containing protein TERM 2656 2039071 - 2039039 - R 79 -12 -2.60723 | opp_overlap 2039048, overlap 2039038 GGAGTCTGAAGGAAT GCCTGATGCGACGC TTAAC GCGTCTTATCAGGC CTACCGCTCGTACCA ndh 2040442 - 2039138 - | NADH dehydrogenase EcSMS35_2018 2041384 - 2040842 - | hypothetical protein nagZ 2042432 - 2041407 - | beta-N-acetylhexosaminidase TERM 2657 2041538 - 2041528 - G 70 -6.8 -4.08706 | opp_overlap 2041528 CCTTTATGATACAAA CGTG TAA CACG TTCTGCCTTGATCGG thiK 2043267 - 2042443 - | thiamine kinase TERM 2658 2043238 - 2043217 - G 91 -9.4 -4.58685 | AAACTGCGGGAAAAA GCGCGACA GCAATT CGTCGCGC GTGAGGGGATTATTG EcSMS35_2021 2043889 - 2043248 - | putative lipoprotein EcSMS35_2022 2044256 - 2043903 - | putative lipoprotein hinT 2044642 - 2044283 - | purine nucleoside phosphoramidase TERM 2659 2044418 - 2044428 + g 75 -5.4 -4.59773 | TTCGGCAATACCTTC TTGC TCA GCAA TTTTTGCCGCTACGG EcSMS35_2024 2044773 - 2044943 + | hypothetical protein TERM 2660 2046470 - 2046445 - g 76 -4 -4.88736 | gap 1, opp_overlap 2046445 2046448 CAGCATGGAGAAAAA CCACACCACGC CTTAT GC-TGGTCTGG TGTTTGACATCAATG fhuE 2044976 - 2047165 + | TonB-dependent siderophore receptor FhuE TERM 2661 2047200 - 2047183 - T 100 -12.7 -5.04987 | opp_overlap 2047183 AACACCTGTAAAAAA GGCAGCC ATCT GGCTGCC TTAGTCTCCCCAACG TERM 2662 2047183 - 2047200 + T 86 -12.7 -3.25823 | opp_overlap 2047183 AACACCTGTAAAAAA GGCAGCC ATCT GGCTGCC TTAGTCTCCCCAACG ptsG 2048658 - 2047225 - | PTS system, glucose-specific IIBC component TERM 2663 2047814 - 2047831 + g 70 -4 -4.61566 | opp_overlap 2047812 2047814 GCGGAGATCATAATA CCGCCC ACTTTC GCGCGG TTTTCTGGTTTAGCA TERM 2664 2048881 - 2048908 + r 76 -8.4 -3.93057 | overlap 2048882 ATTTCAAACGTGGTT ATTCACCGCCCA ATTT TCGGCGGTGAAC TTTACTCGTTTTAGC TERM 2665 2048882 - 2048907 + r 80 -11.9 -2.95111 | overlap 2048881 TTTCAAACGTGGTTA TTCACCGCCCA ATTT TCGGCGGTGAA CTTTACTCGTTTTAG EcSMS35_2027 2049750 - 2048953 - | TatD family hydrolase holB 2050765 - 2049761 - | DNA polymerase III, delta' subunit TERM 2666 2049982 - 2049994 + g 81 -9.1 -4.09864 | TGGTCACCTGCGCAG CGCCA TGA TGGCG TTTTAGCGCATCCAT TERM 2667 2050184 - 2050157 - G 72 -7.7 -3.90922 | gap 1 ATCTCCCTGAAACAA CGCCAGTGCCGC GCCAG GCGA-ACCGGCG CTTAAGCGCAATGCG TERM 2668 2050360 - 2050346 - G 71 -2.8 -4.7497 | opp_overlap 2050336 GGTAGCCAGGAAAAA CCAG GTTTCTG CTGG TGGCTCTTCAAGCGT TERM 2669 2050716 - 2050726 + g 81 -6.8 -4.59773 | CTTCCGGCCTGATAG CTGG CTA CCAG TTTTTCGAAATCAGG tmk 2051403 - 2050762 - | thymidylate kinase EcSMS35_2030 2052415 - 2051393 - | hypothetical protein pabC 2053227 - 2052418 - | aminodeoxychorismate lyase TERM 2670 2053306 - 2053321 + r 73 -6 -4.38712 | opp_overlap 2053306 AAAGCTAAGAAAAAA GGCCCG CAAG CGGACC TTTTATAAGGGTGGG TERM 2671 2053321 - 2053306 - R 100 -8.2 -5.52096 | opp_overlap 2053306 AAAGCTAAGAAAAAA GGCCCG CAAG CGGACC TTTTATAAGGGTGGG fabF 2054588 - 2053347 - | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 2672 2053919 - 2053944 + g 74 -10.3 -3.51329 | CATCACGCTCTTTAT CCCACGGGCGG CTCG CCGCTTGCGGG TTATCATTGCGGGTA TERM 2673 2054215 - 2054235 + g 70 -3.9 -4.68384 | overlap 2054220 ATCTTACGTGGACCA CCGTTCATC AGA GATGTGTGG TTTTCTTCGATCAGT TERM 2674 2054640 - 2054668 + r 72 -9.6 -3.15056 | gap 1, opp_overlap 2054641 2054643, overlap 2054638 GGACAAAAAGATAAA ACT-CAGGCGGTC GAAC GACCGCCTGGAGA TGTTCACTTACGCCT TERM 2675 2054667 - 2054641 - R 100 -13.1 -5.02287 | gap 1, opp_overlap 2054640 2054638, overlap 2054643 GACAAAAAGATAAAA CT-CAGGCGGTC GAAC GACCGCCTGGAG ATGTTCACTTACGCC TERM 2676 2054664 - 2054643 - R 100 -15.9 -2.72919 | opp_overlap 2054640 2054638, overlap 2054641 CAAAAAGATAAAACT CAGGCGGTC GAAC GACCGCCTG GAGATGTTCACTTAC acpP 2054912 - 2054676 - | acyl carrier protein fabG 2055857 - 2055123 - | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 2677 2055818 - 2055838 + g 90 -7.5 -4.86621 | overlap 2055820 GGCCAATTCCGCGGC TTGCACCGG TTA CCAGTGCGA TTTTTCCTTCAAAAT fabD 2056799 - 2055870 - | malonyl CoA-acyl carrier protein transacylase fabH 2057768 - 2056815 - | 3-oxoacyl-[acyl-carrier-protein] synthase 3 plsX 2058906 - 2057836 - | fatty acid/phospholipid synthesis protein PlsX TERM 2678 2058850 - 2058821 - G 78 -10.7 -3.51032 | overlap 2058822 2058825 AGTTGCGAATTAGAA TTCAGTGCCTGCA ATGC TGCAGGCACTGTC ACGGAAGGGCCAAAA TERM 2679 2058849 - 2058822 - G 85 -14.2 -2.70298 | overlap 2058821 2058825 GTTGCGAATTAGAAT TCAGTGCCTGCA ATGC TGCAGGCACTGT CACGGAAGGGCCAAA TERM 2680 2058846 - 2058825 - G 90 -14.5 -2.63347 | overlap 2058822 2058821 GCGAATTAGAATTCA GTGCCTGCA ATGC TGCAGGCAC TGTCACGGAAGGGCC TERM 2681 2058971 - 2058986 + r 71 -9 -3.34895 | opp_overlap 2058955 CCTCACTAAGCTTCA TCACGC AGAC GCGTGA TTACTTAGCGATGAC rpmF 2059160 - 2058987 - | ribosomal protein L32 EcSMS35_2039 2059733 - 2059212 - | hypothetical protein TERM 2682 2059801 - 2059773 - H 80 -10.3 -3.74077 | opp_overlap 2059779, overlap 2059779 CGTCATAGAGTCAAA GAAAAAGGCAGCC TGT GGTTGCCTTTTGC CAATAATTCGCACAC TERM 2683 2059779 - 2059795 + H 82 -10.1 -4.12902 | opp_overlap 2059773 2059779 AGAGTCAAAGAAAAA GGCAGCC TGT GGTTGCC TTTTGCCAATAATTC TERM 2684 2059795 - 2059779 - H 91 -7.9 -5.31519 | opp_overlap 2059779, overlap 2059773 AGAGTCAAAGAAAAA GGCAGCC TGT GGTTGCC TTTTGCCAATAATTC maf2 2059893 - 2060516 + | septum formation protein Maf rluC 2061586 - 2060627 - | ribosomal large subunit pseudouridine synthase C TERM 2685 2062761 - 2062747 - g 88 -5.6 -5.18357 | GAAGCCATCAAAAAA GCCGCT GAA AGCCGC CCGGCTCCGTTCCTG TERM 2686 2063397 - 2063421 + G 74 -10.7 -3.19659 | overlap 2063395 2063393 2063399 CGGTACTGGTACCGT GCGTGACAACG AAT CGTTGTCGCTC TCTATTCTGCGTCTG TERM 2687 2063399 - 2063419 + G 77 -11.9 -3.15459 | overlap 2063397 2063395 2063393 GTACTGGTACCGTGC GTGACAACG AAT CGTTGTCGC TCTCTATTCTGCGTC TERM 2688 2064181 - 2064154 - g 73 -4 -4.75174 | GAGGTAACGGAAAAA GCGCGTACCACC GACG AGCAGCAAGCGC CGCGTCGTGAACGTA rne 2062159 - 2065332 + | ribonuclease E TERM 2689 2065353 - 2065372 + F 100 -11.4 -5.63517 | opp_overlap 2065353 AGCTCAAGTAATCAA GCCCTGGT AACT GCCAGGGC TTTTTTATTTCAGGG TERM 2690 2065372 - 2065353 - f 81 -10.7 -3.45634 | opp_overlap 2065353 AGCTCAAGTAATCAA GCCCTGG TAACTG CCAGGGC TTTTTTATTTCAGGG EcSMS35_2043 2065466 - 2065759 + | hypothetical protein EcSMS35_2044 2065756 - 2066250 + | acetyltransferase TERM 2691 2066303 - 2066275 - T 100 -12.4 -5.47218 | TCTCATGCAAAAAAA TGCCCGCCCCGG CGATC CCAGAGCAGGCA GACAAAACATACCCA flgL 2067298 - 2066345 - | flagellar hook-associated protein 3 TERM 2692 2066617 - 2066628 + g 77 -7.2 -4.56969 | overlap 2066616 2066615 2066625 TGGTTTTATCCAGTG CCGC AGCG GCGG TTTCTTTATCCGCTT flgK 2068953 - 2067310 - | flagellar hook-associated protein FlgK TERM 2693 2067645 - 2067656 + g 72 -5.8 -4.30014 | overlap 2067653 CCACATCTTCTTCGC TCGC CATG GCGA TTTTCGCTTCGTCAG flgJ 2069960 - 2069019 - | flagellar rod assembly protein/muramidase FlgJ flgI 2071057 - 2069960 - | flagellar P-ring protein FlgI flgH 2071767 - 2071069 - | flagellar L-ring protein FlgH TERM 2694 2071812 - 2071794 - R 72 -8.1 -3.96337 | opp_overlap 2071794 TCAAAAATCAGTAAA CCGGTGA ATCTG CCACCGG TTATGCCTTAGAGTT flgG 2072602 - 2071820 - | flagellar basal-body rod protein FlgG flgF 2073494 - 2072739 - | flagellar basal-body rod protein FlgF TERM 2695 2073426 - 2073438 + g 74 -10.5 -3.24329 | opp_overlap 2073424, overlap 2073424 ATTGGCCAGATTACT GGCGG TTA CCGCC TGTTGATTCAGCGTC flgE 2074719 - 2073514 - | flagellar hook protein FlgE TERM 2696 2073788 - 2073800 + g 70 -5.5 -4.32951 | opp_overlap 2073784 2073783, overlap 2073784 GCCAGTACAATCTGC CCCAG CAG TTGGG TTTGTTCGTTGGAAT TERM 2697 2074144 - 2074128 - G 85 -7.3 -4.77173 | overlap 2074129 TCTTCACAAAATAAA CGCTCAT ATC ATGAGCA TTACCCTGACTATCG flgD 2075439 - 2074744 - | flagellar hook capping protein FlgD flgC 2075855 - 2075451 - | flagellar basal-body rod protein FlgC TERM 2698 2075829 - 2075817 - G 72 -10.5 -3.05816 | GGACTGGGCAGTTAA CGCCG AAC CGGCG ATATCAAAAATATTC flgB 2076275 - 2075859 - | flagellar basal-body rod protein FlgB TERM 2699 2076216 - 2076234 + g 72 -10.2 -3.38991 | overlap 2076215 CACTTCCTGACGCTG GGCGCGCA GAT TGAGCGCC TCTTGTTGAAAACGT EcSMS35_2056 2076462 - 2076292 - | hypothetical protein TERM 2700 2076813 - 2076785 - gH 80 -10.2 -3.85567 | gap 1 AATGTCAAACTGAAA CGCGGCAGGCTGG ATAC CCTGCC-ACCGCG TACGGTGCTGGATAT flgA 2076431 - 2077090 + | flagella basal body P-ring formation protein FlgA TERM 2701 2077422 - 2077395 - g 73 -4 -4.86621 | overlap 2077396 2077399 ACGGTGAACTAAAAA TGGACACCGGCA AAAT TGCCGATGCGCT GATCAACGAAGCGCA flgM 2077166 - 2077459 + | negative regulator of flagellin synthesis FlgM flgN 2077464 - 2077880 + | flagella synthesis protein FlgN TERM 2702 2077884 - 2077915 + T 71 -10.2 -2.77344 | gap 1, opp_overlap 2077884 2077887, overlap 2077884 2077888 ATTTCGATCTGAAGA TTATCTCCGGCCTGC ACT GCAGGCCGGA-ATGC ATTGTTACACCGTCC TERM 2703 2077884 - 2077916 + T 72 -8.6 -3.62597 | opp_overlap 2077884 2077887, overlap 2077884 2077888 ATTTCGATCTGAAGA T-TATCTCCGGCCTGC ACT GCAGGCCGGA-ATGCA TTGTTACACCGTCCG TERM 2704 2077913 - 2077887 - T 87 -14.4 -2.75074 | opp_overlap 2077884 2077884 2077888, overlap 2077884 TCGATCTGAAGATTA TCTCCGGCCTGC ACT GCAGGCCGGAAT GCATTGTTACACCGT TERM 2705 2077888 - 2077912 + T 93 -15.7 -2.6563 | opp_overlap 2077887 2077884, overlap 2077884 2077884 CGATCTGAAGATTAT CTCCGGCCTGC ACT GCAGGCCGGAA TGCATTGTTACACCG mviN 2079455 - 2077920 - | integral membrane protein MviN TERM 2706 2079502 - 2079486 - R 100 -13.7 -4.11692 | GACCCACGGGCAAAA CGCCTGC AAG GCAGGCG CTGAAAGAGGCGAAT EcSMS35_2061 2080488 - 2079565 - | oxidoreductase family protein EcSMS35_2062 2081137 - 2080490 - | hypothetical protein rimJ 2081732 - 2081148 - | ribosomal-protein-alanine acetyltransferase TERM 2707 2081467 - 2081455 - G 84 -7.7 -4.67556 | opp_overlap 2081455 ACAACATTGGAAAAA TTGGC AAC GCCAA TAATCTCTTTTTCGT TERM 2708 2082352 - 2082371 + G 100 -4.9 -5.85178 | opp_overlap 2082351 GTGGTGAAACTAATC CGTCCAC AACAGC GTGGTCG TTTTTTTTCGCTGTT TERM 2709 2082465 - 2082481 + G 91 -7.9 -5.03227 | CGACTTTCGCCTGGT CTGCGCC ACA GGGGCAG TTTTGTTTGTGCTGT mdtH 2081968 - 2083176 + | multidrug resistance protein MdtH grxB 2083240 - 2083887 + | GrxB family glutaredoxin TERM 2710 2083890 - 2083936 + F 80 -4.3 -5.31275 | gap 1, opp_overlap 2083890, overlap 2083898 2083900 AATGGCGATTTAATA CTGACCCGCCGCGGCAGCCTGT ATTC GCGGGTTGCCGCCGTTT-TCAG TTTTTTCTGCTGGCG TERM 2711 2083898 - 2083929 + F 100 -12.2 -4.55016 | opp_overlap 2083890, overlap 2083890 2083900 TTTAATACTGACCCG CCGCGGCAGCCTGT ATTC GCGGGTTGCCGCCG TTTTCAGTTTTTTCT TERM 2712 2083900 - 2083927 + F 84 -13.4 -2.56715 | opp_overlap 2083890, overlap 2083898 2083890 TAATACTGACCCGCC GCGGCAGCCTGT ATTC GCGGGTTGCCGC CGTTTTCAGTTTTTT EcSMS35_2066 2084021 - 2084581 + | putative lipoprotein TERM 2713 2084588 - 2084603 + F 100 -11.8 -4.91852 | opp_overlap 2084585 ACTGATTAATCACGA GGGCGC ATTC GCGCCC TTTATTTTTCGTGCA pyrC 2084687 - 2085733 + | dihydroorotase, homodimeric type dinI 2085807 - 2086052 + | DNA-damage-inducible protein I TERM 2714 2086074 - 2086089 + F 100 -11.8 -5.85244 | GTGATTTTTGTTTTT GCCGGG TCGC CCCGGC TTTTTTATTTTACTT TERM 2715 2086367 - 2086356 - g 71 -3 -4.8236 | GATGGAAAAAAATAA TGAA GTCA TTCA GACTCATCCGCTCGT EcSMS35_2069 2086342 - 2086596 + | hypothetical protein TERM 2716 2086637 - 2086621 - f 84 -9.4 -4.20084 | opp_overlap 2086621 2086632 ACCATCCACCCAAAA GGCACC TCACC GGTGCC TTTACCATTTCTGGG TERM 2717 2086621 - 2086637 + F 79 -9.4 -3.74347 | opp_overlap 2086621, overlap 2086632 ACCATCCACCCAAAA GGCACC TCACC GGTGCC TTTACCATTTCTGGG TERM 2718 2086726 - 2086712 - g 100 -3.6 -5.76633 | GCAGAGAGAAAAAAA TGAAAT ACG ATCTCA TCATTATTGGCAGCG TERM 2719 2087649 - 2087660 + G 75 -4.4 -4.79352 | CACCTATGATAATTC TCCT GACG AGGA TTTTATTATCGATAC solA 2086711 - 2087829 + | N-methyl-L-tryptophan oxidase TERM 2720 2087839 - 2087858 + F 93 -10.7 -4.57837 | opp_overlap 2087833 CAATAATCATCATTA CGGCCTC CAGAAT GAGGCCG TTTTTACAGGAGTAT TERM 2721 2087918 - 2087928 + G 75 -5.4 -4.62163 | CAATAATATTCGCGA GCAT CTG ATGC TTTATCTTTTTCTCT EcSMS35_2071 2087877 - 2087990 + | hypothetical protein EcSMS35_2072 2088261 - 2088115 - | hypothetical protein TERM 2722 2088670 - 2088684 + GH 75 -5.6 -4.66609 | overlap 2088650 CGCACAGGCTGACTT TGCCGG TGC CCTGCA TTTTTGGCTCGCGTG EcSMS35_2073 2088176 - 2088817 + | nickel-dependent hydrogenase b-type cytochrome subunit yceI 2088821 - 2089396 + | YceI protein TERM 2723 2089397 - 2089443 + T 71 -9.8 -3.08798 | gap 2, opp_overlap 2089405 2089406, overlap 2089402 2089404 2089407 GTACAGCAGAAGTAA GAGTGAA-AT-GTTGCCGGATG GCACG CATCCGGCAATGATATTTACTC TGTTGGATCAGGAAT TERM 2724 2089404 - 2089434 + T 71 -8.3 -3.55205 | opp_overlap 2089405 2089406, overlap 2089402 2089397 2089407 AGAAGTAAGAGTGAA ATGTTGCCGGATG GCACG CATCCGGCAATGA TATTTACTCTGTTGG TERM 2725 2089432 - 2089406 - T 75 -10.9 -2.86618 | opp_overlap 2089404 2089402 2089397 2089407, overlap 2089405 AAGTAAGAGTGAAAT GTTGCCGGATG GCACG CATCCGGCAAT GATATTTACTCTGTT TERM 2726 2089407 - 2089431 + T 89 -14.4 -2.89361 | opp_overlap 2089406 2089405, overlap 2089404 2089402 2089397 AGTAAGAGTGAAATG TTGCCGGATG GCACG CATCCGGCAA TGATATTTACTCTGT EcSMS35_2075 2090490 - 2089438 - | rhodanese domain-containing protein TERM 2727 2089631 - 2089645 + g 70 -4.2 -4.67904 | opp_overlap 2089632, overlap 2089632 CACTGAATAAAAAGC AGATGG CAG CCATCA TTTTTACAGTTGGTA TERM 2728 2089787 - 2089763 - G 70 -4.1 -4.63218 | opp_overlap 2089784 2089786 TTTTTGCCAATAAAA CGCACCGGCAA GCC CTGCTCGCGCG CCTTACGGGCGTATT TERM 2729 2090435 - 2090448 + g 70 -6.7 -4.10429 | overlap 2090424 CGCGGTTCGCTCTCA GCCAA CATT TTGGC TTTTAACGCGTCGTT TERM 2730 2090896 - 2090874 - g 72 -8.4 -3.73224 | overlap 2090854 2090853 TTACGTTTTATGAAA CGACGCGCAA AAA TTGTGCATCG CAACCTGGAACTGTG TERM 2731 2091247 - 2091237 - g 70 -5.4 -4.42806 | TTACGCTCAAATAAA TCGA TGC TCGA CCGCAAAGATTTAAA lpxL 2090715 - 2091635 + | lipid A biosynthesis lauroyl acyltransferase mdtG 2091807 - 2093033 + | multidrug resistance protein MdtG msyB 2093116 - 2093490 + | acidic protein MsyB EcSMS35_2079 2093718 - 2093491 - | putative lipoprotein TERM 2732 2093736 - 2093766 + r 81 -11.3 -3.18094 | opp_overlap 2093742, overlap 2093742 GATACCTCTTCCGTA AAAAAATACCGGC ATAAC GCCGGTATTTTTA TTGGCTCGTTGTTTT TERM 2733 2093760 - 2093742 - R 100 -11 -5.40072 | opp_overlap 2093742 2093736 TCTTCCGTAAAAAAA TACCGGCA TAA CGCCGGTA TTTTTATTGGCTCGT TERM 2734 2093742 - 2093760 + r 93 -10.3 -5.11063 | opp_overlap 2093742, overlap 2093736 TCTTCCGTAAAAAAA TACCGGC ATAAC GCCGGTA TTTTTATTGGCTCGT mdoH 2096404 - 2093891 - | glucans biosynthesis glucosyltransferase H mdoG 2097980 - 2096427 - | glucans biosynthesis protein G TERM 2735 2097518 - 2097528 + g 88 -5.4 -5.22289 | CCCCGAGCATGCTGA CGAT TTC ATCG TTTTTATCTTTGCTG EcSMS35_2082 2098033 - 2098164 + | hypothetical protein EcSMS35_2083 2098168 - 2098311 + | hypothetical protein TERM 2736 2098876 - 2098899 + G 100 -3.2 -5.64274 | gap 1, overlap 2098878 2098879 AAACGAATAAAAAAT TC-TCGATGGT AAA ACTATCGGTGA TTTTTTTGTGCCTCG mdoC 2098356 - 2099513 + | glucans biosynthesis protein C EcSMS35_2085 2100942 - 2099521 - | phopholipase D TERM 2737 2099565 - 2099595 + g 100 -11.8 -5.00884 | opp_overlap 2099568, overlap 2099568 ACGCCAGTCTGACCA TAACCCGCTTCCAG AAA CTGGTGGCGGGTTC TTTTTTGAGAACAAT TERM 2738 2099592 - 2099568 - G 80 -11.3 -3.41051 | opp_overlap 2099565 2099568 CCAGTCTGACCATAA CCCGCTTCCAG AAA CTGGTGGCGGG TTCTTTTTTGAGAAC TERM 2739 2099568 - 2099592 + g 100 -13.5 -4.61482 | opp_overlap 2099568, overlap 2099565 CCAGTCTGACCATAA CCCGCTTCCAG AAA CTGGTGGCGGG TTCTTTTTTGAGAAC TERM 2740 2099602 - 2099613 + g 70 -4.4 -4.46112 | GGCGGGTTCTTTTTT GAGA ACAA TCTC TTTCTTTGCATGACG TERM 2741 2100301 - 2100278 - G 74 -9.7 -3.53811 | opp_overlap 2100281, overlap 2100281 2100284 TCCATTTTGCGTAAA TAACGATGC GTCATG GCATCGTTA TGCCAGGAGGCGGGT TERM 2742 2100894 - 2100882 - G 78 -5.5 -4.8048 | TCTCCAGAGGAAAAA GGCCA CAC TGACC GGGATGTTGCGAACA EcSMS35_2086 2101477 - 2100944 - | appr-1-p processing domain-containing protein EcSMS35_2087 2101727 - 2101572 - | hypothetical protein csgC 2102336 - 2102004 - | curli production protein CsgC TERM 2743 2102357 - 2102372 + r 89 -10.4 -4.49556 | opp_overlap 2102357 TCTCCCGAAAAAAAA CAGGGC TTGC GCCCTG TTTCTTTAATACAGA TERM 2744 2102372 - 2102357 - R 100 -10.4 -5.75342 | opp_overlap 2102357 TCTCCCGAAAAAAAA CAGGGC TTGC GCCCTG TTTCTTTAATACAGA csgA 2102849 - 2102394 - | major curlin protein CsgA csgB 2103372 - 2102890 - | minor curlin protein CsgB TERM 2745 2103550 - 2103564 + G 77 -2.9 -5.11836 | ACGCTGTTATCTACG CAAAA AAATA TTTTG TTTTCTTTTAAATCT EcSMS35_2091 2103448 - 2103633 + | hypothetical protein EcSMS35_2092 2104117 - 2103986 - | hypothetical protein TERM 2746 2104357 - 2104336 - g 93 -8.9 -4.77036 | opp_overlap 2104339 TTTGAGCAGGAAAAA CAACAATAT CAAA ATATTGTTG CTAAATACGCCTGAA csgD 2104178 - 2104750 + | transcriptional regulator CsgD csgE 2104755 - 2105144 + | curli production assembly/transport subunit CsgE csgF 2105169 - 2105585 + | curli production assembly/transport component CsgF TERM 2747 2105719 - 2105762 + G 85 -11.8 -3.70902 | opp_overlap 2105723, overlap 2105723 TCGTGCTCAGAGCTA CAAAGATTTGACCCATCTGC CAGC GCCGACGGGTAAGATCTTTG TTTCGGTATACAACA TERM 2748 2105723 - 2105758 + G 77 -6.8 -4.48299 | opp_overlap 2105723, overlap 2105719 GCTCAGAGCTACAAA GATTTGACCCATCTGC CAGC GCCGACGGGTAAGATC TTTGTTTCGGTATAC csgG 2105612 - 2106445 + | curli production assembly/transport subunit CsgG TERM 2749 2106475 - 2106457 - T 95 -7.4 -5.4251 | opp_overlap 2106457 2106456 CTGACAGATAAAAAA GCCGGA ATTATCA TCCGGC ATTTTACGGTTTAAG TERM 2750 2106492 - 2106518 + T 93 -9.5 -5.01811 | opp_overlap 2106496, overlap 2106496 TTTTACGGTTTAAGC GAAAGCGTGAG TGCCC CTCACGCTTTA TTTTTGATTTCCTGC TERM 2751 2106514 - 2106496 - T 80 -10.3 -3.75332 | opp_overlap 2106492 2106496 ACGGTTTAAGCGAAA GCGTGAG TGCCC CTCACGC TTTATTTTTGATTTC TERM 2752 2106496 - 2106514 + T 93 -10.3 -5.00388 | opp_overlap 2106496, overlap 2106492 ACGGTTTAAGCGAAA GCGTGAG TGCCC CTCACGC TTTATTTTTGATTTC EcSMS35_2097 2107030 - 2106509 - | hypothetical protein TERM 2753 2106563 - 2106581 + g 71 -2.2 -4.88407 | overlap 2106561 CTTTGCACTACGCGC CGCCAGCC ACA GGCCGCTG TTTTTCATTGCGTAA EcSMS35_2098 2107656 - 2107102 - | chaperone TorD EcSMS35_2099 2108417 - 2107680 - | phosphotransferase domain-containing protein TERM 2754 2108125 - 2108108 - G 72 -5.5 -4.57073 | CATGCGGCGCAAAAA CCGGCTC ATGA AAACCGG CAATAATCAGATCCA EcSMS35_2100 2109410 - 2108472 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 2755 2109520 - 2109510 - R 81 -3.2 -5.40072 | TCGGTGGCAAAAAAA GCAA ATT TCGC TTATTAAAACTGCAT TERM 2756 2109745 - 2109764 + r 100 -10 -5.92337 | opp_overlap 2109745 2109743 CATCTTTAAAGAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTTCGTATAT EcSMS35_2102 2110509 - 2109823 - | hypothetical protein TERM 2757 2111057 - 2111033 - R 100 -13.6 -4.99947 | GTTAATGAAATAAAA CAAAGCCCGG TTCGC CCGGGCTCTG CGCCGATAATACACT TERM 2758 2111087 - 2111120 + r 70 -9.7 -2.84504 | gap 1, overlap 2111085 TTAACTGTATGCATG TAGCGTACGTT-GGCA AAG TGCTGAACGTACGCAA TCCTCTTTACCGAAT phoH 2112136 - 2111072 - | protein phoH TERM 2759 2111911 - 2111894 - G 70 -10.5 -2.80816 | opp_overlap 2111894 2111893 TTTGTATTCATCACA CGCGCCG TTGG CAGCGCG ATTATGCGCACGAAC TERM 2760 2112373 - 2112360 - R 72 -9.5 -3.22884 | opp_overlap 2112368 2112370 GCATCAACGCACGAA CGCCG GATG CGGCG TGACCGCCTTATTCA EcSMS35_2104 2113752 - 2112481 - | Tat-translocated enzyme TERM 2761 2113613 - 2113588 - G 78 -7.5 -4.37092 | ATGTTCGCCATAAAA CGGCTGCGC TTCACTGC GCGCATCCG GTGAAAGCGTGCCCG TERM 2762 2113630 - 2113640 + g 82 -3.2 -5.28176 | overlap 2113622 TGAAAGCGTGCCCGG TGCA CTT TGCG TTTTTTGTGCATGAG TERM 2763 2113709 - 2113732 + g 90 -9.6 -4.44797 | opp_overlap 2113706 2113707, overlap 2113706 CCTTTCAGTAAACGT CGGCGTGA CGGTTCAT TCACGCCG TTTTCATCTTCATAC EcSMS35_2105 2114885 - 2113758 - | hypothetical protein EcSMS35_2106 2115773 - 2114943 - | iron permease FTR1 family protein TERM 2764 2115912 - 2115956 + G 85 -12.9 -3.23393 | opp_overlap 2115919 2115920, overlap 2115916 2115919 GTAAAAATATTTTGA GAAAAAACGCAGAGGGCAATC ACT GATTGCCCTCTGCCTGCTTCC TGTTATGACGTGAAA EcSMS35_2107 2115809 - 2115937 + | hypothetical protein TERM 2765 2115916 - 2115952 + T 90 -12.3 -3.42013 | opp_overlap 2115919 2115920, overlap 2115912 2115919 AAATATTTTGAGAAA AAACGCAGAGGGCAATC ACT GATTGCCCTCTGCCTGC TTCCTGTTATGACGT TERM 2766 2115919 - 2115949 + T 100 -18.4 -2.86181 | opp_overlap 2115919 2115920, overlap 2115916 2115912 TATTTTGAGAAAAAA CGCAGAGGGCAATC ACT GATTGCCCTCTGCC TGCTTCCTGTTATGA TERM 2767 2115949 - 2115919 - T 100 -18.4 -5.252 | opp_overlap 2115919 2115916 2115912, overlap 2115920 TATTTTGAGAAAAAA CGCAGAGGGCAATC ACT GATTGCCCTCTGCC TGCTTCCTGTTATGA TERM 2768 2115948 - 2115920 - T 100 -21.9 -3.74397 | opp_overlap 2115919 2115916 2115912, overlap 2115919 ATTTTGAGAAAAAAC GCAGAGGGCAATC ACT GATTGCCCTCTGC CTGCTTCCTGTTATG putP 2117501 - 2115993 - | sodium/proline symporter EcSMS35_2109 2117628 - 2117491 - | hypothetical protein EcSMS35_2110 2117869 - 2117660 - | hypothetical protein TERM 2769 2119870 - 2119856 - g 75 -5.7 -4.62336 | opp_overlap 2119847 AGTGCACTGCAAAAA TGGCA GTCCT TGCCA ATGCTGGAACAACCG TERM 2770 2120019 - 2120048 + G 70 -6.3 -4.18494 | opp_overlap 2120005 ACGCGCCAATCTGGT TTGCCACGCCTCC GGCT GAACGCGCGGCAA TTTTGCATCGCGCTG TERM 2771 2121852 - 2121867 + G 79 -10.4 -3.73775 | opp_overlap 2121843 TGAATACCGCTGCCG CTGGCG GTAA CGCCAG TTTAATGACGATCGG putA 2117924 - 2121886 + | bifunctional protein PutA TERM 2772 2121890 - 2121924 + T 87 -11.5 -3.62096 | gap 1, opp_overlap 2121888 2121890 2121891, overlap 2121893 2121894 ACGATCGGTTAAACA GGTAGCCGGAGGATGT TACA ACCTCCTCCGGC-ATC TTTAACGTGGTCGAA TERM 2773 2121924 - 2121890 - T 71 -9.3 -3.35775 | gap 1, opp_overlap 2121890 2121893 2121894, overlap 2121888 2121891 ACGATCGGTTAAACA GGTAGCCGGAGGATGT TACA ACCTCCTCCGGC-ATC TTTAACGTGGTCGAA TERM 2774 2121924 - 2121891 - T 74 -10.9 -2.61144 | opp_overlap 2121890 2121893 2121894, overlap 2121890 2121888 CGATCGGTTAAACAG GTAGCCGGAGGATGT TACA ACCTCCTCCGGCATC TTTAACGTGGTCGAA TERM 2775 2121893 - 2121922 + T 85 -12.1 -3.39018 | opp_overlap 2121890 2121891 2121888, overlap 2121890 2121894 ATCGGTTAAACAGGT AGCCGGAGGATGT TACA ACCTCCTCCGGCA TCTTTAACGTGGTCG TERM 2776 2121894 - 2121921 + T 93 -15.6 -2.63089 | opp_overlap 2121890 2121891 2121888, overlap 2121893 2121890 TCGGTTAAACAGGTA GCCGGAGGATGT TACA ACCTCCTCCGGC ATCTTTAACGTGGTC rutR 2122564 - 2121926 - | transcriptional regulator RutR TERM 2777 2122096 - 2122141 + g 74 -8.3 -3.99405 | gap 1, opp_overlap 2122096 AATGCTGCGGATCAA TCGGCGCGAGTTTGCCGCTT TTTACCC AACCGGCAATCA-GCGCCGA TTTCTCATCAATTAA TERM 2778 2122488 - 2122501 + g 82 -2.3 -5.45652 | overlap 2122488 AAAGTGTCCAGTGCT GCGCT AAGA ATCGC TTTTTTCTTCGCGCT EcSMS35_2113 2122852 - 2123943 + | putative monooxygenase rutA TERM 2779 2124429 - 2124464 + G 87 -4.6 -5.26918 | gap 1, opp_overlap 2124434, overlap 2124430 TTCACCGGTATCGCT ACCAACGTCT-GCGTCG AAT CGACGCTACGCGATGGC TTTTTTCTGGAGTAT EcSMS35_2114 2123940 - 2124635 + | putative isochorismatase family protein, rutB EcSMS35_2115 2124647 - 2125033 + | rutC protein EcSMS35_2116 2125041 - 2125853 + | putative rutD protein TERM 2780 2126281 - 2126292 + G 70 -7.2 -4.11216 | overlap 2126277 GGGGCTGGATACCGG CCCG ATGT CGGG TTTTGACCGTCAACA EcSMS35_2117 2125850 - 2126440 + | putative rutE protein TERM 2781 2126876 - 2126903 + G 79 -9.8 -3.75015 | overlap 2126877 2126899 CGAAGCGATTCATCG TCACGCCACCCC CTAC GGGCTGGTGTGG TTTGATCGCAGTTAT TERM 2782 2126877 - 2126902 + G 71 -11.1 -2.84527 | overlap 2126876 2126899 GAAGCGATTCATCGT CACGCCACCCC CTAC GGGCTGGTGTG GTTTGATCGCAGTTA EcSMS35_2118 2126451 - 2126945 + | putative flavin reductase rutF EcSMS35_2119 2126966 - 2128294 + | putative purine permease ycdG TERM 2783 2128321 - 2128303 - f 100 -13.1 -4.84918 | opp_overlap 2128300 GCCATAAACAGAAAA CCGCCGG GGTTA CCGGCGG TGATGGCTTTTTGAC TERM 2784 2128603 - 2128618 + F 74 -7.6 -4.19817 | opp_overlap 2128597 AGAATTAACGCGGCG TATGGC GGCT GCCATA TTTTCGCTACGTGGG wrbA 2128923 - 2129519 + | NAD(P)H:quinone oxidoreductase, type IV EcSMS35_2121 2129540 - 2129767 + | hypothetical protein TERM 2785 2129775 - 2129797 + T 100 -14.9 -4.84673 | opp_overlap 2129771 ACGTTTAACCAGCGA CTCCCCCGT AGCGA ACGGGGGAG TTTTCTGTTATTTCA agp 2131046 - 2129805 - | glucose-1-phosphatase TERM 2786 2130606 - 2130622 + g 87 -4.3 -5.19212 | CACCGGATTAAAGGT TGGGTCC ATA GTGCCCA TTTTTTCCTGGTGAT TERM 2787 2131195 - 2131167 - R 91 -10.3 -4.61633 | opp_overlap 2131169 ATACATCTTCAAAAA CAGGCAAGGTTTG ACG CAAACTATGCCTG ATTAGCCCCTGCCTC EcSMS35_2123 2132175 - 2131339 - | hypothetical protein TERM 2788 2133135 - 2133155 + G 72 -6.9 -4.18494 | overlap 2133124 TTAACGCCGAAGATT TTGACGATA TCT TCTCGTCAA TTTTCGGTCAGCATG TERM 2789 2133655 - 2133641 - g 86 -6.4 -5.14563 | overlap 2133623 CTGGTGAGCAAAAAA CAGACC GGC GATCTG TATGCGGTACTGAAA cbpA 2132855 - 2133775 + | curved DNA-binding protein TERM 2790 2134059 - 2134029 - g 85 -14 -2.73364 | opp_overlap 2134027 2134026 2134037, overlap 2134035 TGCGCACCTGAAGCA GGAAAACCGCCTGC TGC GCCAGCGGCTTTCC CGGTTTGTAGCTCAT TERM 2791 2134053 - 2134035 - g 78 -8 -4.3534 | opp_overlap 2134027 2134026 2134037, overlap 2134029 CCTGAAGCAGGAAAA CCGCCTGC TGC GCCAGCGG CTTTCCCGGTTTGTA cbpM 2133775 - 2134080 + | chaperone-modulator protein CbpM TERM 2792 2134196 - 2134210 + T 72 -7.1 -4.07568 | opp_overlap 2134205 2134206, overlap 2134153 CCTAATGCCTGATGC GACGC TAAAC GCGTC TTTTCAGGCGCACAA torD 2134831 - 2134232 - | chaperone protein TorD TERM 2793 2134672 - 2134690 + g 89 -13.1 -3.36823 | overlap 2134680 TTTCCAGCTCATTCA CCGCCGC AGTGA GCGGCGG TTCACTTTTCAGCAA torA 2137374 - 2134828 - | trimethylamine-N-oxide reductase TERM 2794 2135718 - 2135686 - G 81 -9.2 -4.07678 | gap 2, opp_overlap 2135686 2135685 2135683 GCGGAAAATATCAAA GTCGTTGCGCGCCTCA AAC TGCGGCG-GCA-CGAC CTGTTTCATGGCGAT TERM 2795 2137012 - 2137001 - G 72 -5.8 -4.38712 | CTCACGCGCACAAAA CGGT TATC ACCG CGCTGGGAAGTGTCG torC 2138546 - 2137374 - | cytochrome c-type protein torC torR 2138676 - 2139368 + | torCAD operon transcriptional regulatory protein TorR torT 2140369 - 2139341 - | periplasmic protein TorT TERM 2796 2139481 - 2139454 - G 72 -5.6 -4.48987 | gap 1 GCGTCAGAACTAAAA TCGGTGGGCTGAC ATT ATCAGAC-ACCGA TTGCCCCTGTAATTG TERM 2797 2139708 - 2139738 + g 72 -8.2 -3.7456 | overlap 2139695 ATTTCTGGATGGCGC TCCAGCATCTCCTG CAA CAGGTTACGCTGGA TTTCAATATCGTTAT TERM 2798 2140244 - 2140222 - G 72 -7.6 -3.86346 | opp_overlap 2140223, overlap 2140223 TCAGGCTGGGATAAA GCGCGCACAG TTT CCATGCGCGT TTGGCTTTAAGCGGC TERM 2799 2140243 - 2140223 - G 71 -11.1 -2.91593 | opp_overlap 2140223, overlap 2140222 CAGGCTGGGATAAAG CGCGCACAG TTT CCATGCGCG TTTGGCTTTAAGCGG TERM 2800 2141149 - 2141135 - g 76 -4.2 -4.89852 | overlap 2141137 2141143 2141144 GCAGATCCAGAAAAA TGCAGC AAC GCTGGA ACACCAGCTCAATAA torS 2140482 - 2143184 + | TMAO reductase system sensor TorS TERM 2801 2143304 - 2143283 - g 100 -2.9 -5.71712 | gap 1, overlap 2143286 2143287 TGGCAGAGAAAAAAA GAAC-CCGCT GGC AGCGGCGGCC AGGCACGACGGGCGG TERM 2802 2143300 - 2143286 - g 80 -5.6 -4.92669 | overlap 2143283 2143287 CAGAGAAAAAAAGAA CCCGCT GGC AGCGGC GGCCAGGCACGACGG TERM 2803 2143299 - 2143287 - g 71 -9.1 -3.53161 | overlap 2143286 2143283 AGAGAAAAAAAGAAC CCGCT GGC AGCGG CGGCCAGGCACGACG EcSMS35_2132 2143267 - 2144340 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2804 2144384 - 2144352 - T 71 -7.8 -3.79909 | gap 1, opp_overlap 2144360 2144374, overlap 2144353 CTAAATTAGCAACAA GCGGAACATCACCTC GCAC GGGGTGATGTTC-AC AAAATCACATTATTT EcSMS35_2133 2144562 - 2144389 - | GnsA/GnsB family transcriptional regulator TERM 2805 2144751 - 2144735 - R 100 -9.4 -5.4251 | opp_overlap 2144735 2144732 GGCAGATATAAAAAA GGCTCC ACGAG GGAGCC TGATATTATTTTGTG TERM 2806 2144735 - 2144751 + r 70 -9.4 -2.95962 | opp_overlap 2144735, overlap 2144732 GGCAGATATAAAAAA GGCTCC ACGAG GGAGCC TGATATTATTTTGTG EcSMS35_2134 2144876 - 2144757 - | hypothetical protein EcSMS35_2135 2145168 - 2144956 - | cold shock DNA-binding protein cspH 2145454 - 2145666 + | cold-shock DNA-binding domain-containing protein CspH appA 2146964 - 2145654 - | periplasmic AppA protein TERM 2807 2146497 - 2146510 + g 72 -4.5 -4.59853 | overlap 2146498 ATTCGCGTTATCCAG TTGGC AAAC GCCAG TTTTTAGAGGATTAA TERM 2808 2146596 - 2146610 + g 77 -10 -3.65542 | overlap 2146595 AGGTGCCAGCCCGGC GGCGAA GGC TTCGCC TGTTTTACGGGTACG TERM 2809 2146659 - 2146674 + g 70 -4.6 -4.56775 | opp_overlap 2146647 2146646, overlap 2146660 AATCGCGACCTGACC AGGCTG CGGG CAGCCC TTTTTCGCCAGCAAT appB 2148285 - 2147149 - | cytochrome bd-II oxidase, subunit II appC 2149841 - 2148297 - | cytochrome bd-II oxidase, subunit I TERM 2810 2148925 - 2148935 + g 77 -8.2 -4.0942 | ATCAAATTCTTCAGA CCCG GCA CGGG TTTATCTAATGAGTG TERM 2811 2149404 - 2149369 - G 70 -5.4 -4.34402 | gap 1, opp_overlap 2149369 GTGTCGATATCAAAA TGCGCACCGGTCGGGTA TTG CATCCAACCGTTG-GCA TTCAATATCCACAAT hyaF 2150832 - 2149975 - | hydrogenase-1 operon protein HyaF TERM 2812 2150254 - 2150232 - G 83 -6.2 -4.9792 | opp_overlap 2150233, overlap 2150233 GACGTGAGAGAAAAA GCCGATCAGC CTC GCTGATGGGT AATTGCGTCAGATTA TERM 2813 2150253 - 2150233 - G 77 -9.7 -3.58029 | opp_overlap 2150233, overlap 2150232 ACGTGAGAGAAAAAG CCGATCAGC CTC GCTGATGGG TAATTGCGTCAGATT hyaE 2151227 - 2150829 - | hydrogenase-1 expression protein HyaE hyaD 2151811 - 2151224 - | hydrogenase 1 maturation peptidase HyaD hyaC 2152515 - 2151808 - | Ni/Fe-hydrogenase 1 B-type cytochrome subunit HyaC TERM 2814 2152373 - 2152392 + g 77 -10 -3.57462 | gap 1, opp_overlap 2152363 2152361 AGATACGTCGCCTCA CCGCTGACC GAA GG-CAGCGG TTTGCCGATGAAGTA hyaB 2154327 - 2152534 - | nickel-dependent hydrogenase 1, large subunit TERM 2815 2153116 - 2153130 + g 88 -11.4 -3.72893 | TTCCATCGCGTTACC GCGCCA GCG TGGCGC TTTGATCCACGAGTA TERM 2816 2153624 - 2153647 + g 70 -4.6 -4.56597 | gap 1, opp_overlap 2153615 2153631 GCACAAGGCATCCCG CCGACAATCCA GTT TGGAT-GTGGG TTTTTACCGCCAAAG hyaA 2155442 - 2154324 - | nickel-dependent hydrogenase 1, small subunit EcSMS35_2146 2155643 - 2155855 + | hypothetical protein TERM 2817 2155994 - 2155962 - f 79 -9.2 -3.90744 | opp_overlap 2155967, overlap 2155967 GCTTCCGCCAAATAA GATAAGGGGTTAGC TAAAT GCTAACCCCTTTTT CTTTTGCCTGTCGAA TERM 2818 2155989 - 2155967 - f 100 -13.5 -3.90464 | opp_overlap 2155967, overlap 2155962 CGCCAAATAAGATAA GGGGTTAGC TAAAT GCTAACCCC TTTTTCTTTTGCCTG TERM 2819 2155967 - 2155989 + F 100 -13.5 -5.48213 | opp_overlap 2155967 2155962 CGCCAAATAAGATAA GGGGTTAGC TAAAT GCTAACCCC TTTTTCTTTTGCCTG TERM 2820 2156381 - 2156368 - g 70 -5.2 -4.42386 | TCCTGACCTATAAAA CGGC GAATAA GCCG ACCGGGATTATCTCC EcSMS35_2148 2156163 - 2156822 + | hypothetical protein TERM 2821 2156842 - 2156868 + F 100 -10.1 -5.46657 | ACCCGCTAACACTTT CATAGCCTCGC TTTAT GCGGGGCTTTG TTTTTTGTTACACTG TERM 2822 2156999 - 2156972 - g 75 -6.9 -4.44046 | opp_overlap 2156989, overlap 2156956 2156973 2156975 GCTATCTCAAAGAAA GCAGCCAGTGG AGTGAG CCACTGGCGGT GGTGATTGCAGAGAA TERM 2823 2156998 - 2156973 - g 70 -10.4 -3.25946 | opp_overlap 2156989, overlap 2156956 2156972 2156975 CTATCTCAAAGAAAG CAGCCAGTGG AGTGAG CCACTGGCGG TGGTGATTGCAGAGA TERM 2824 2156996 - 2156975 - g 77 -11.6 -3.18854 | opp_overlap 2156989, overlap 2156956 2156973 2156972 ATCTCAAAGAAAGCA GCCAGTGG AGTGAG CCACTGGC GGTGGTGATTGCAGA TERM 2825 2157179 - 2157148 - g 91 -8 -5.06414 | opp_overlap 2157153 TTTGGCGAAGAAAAA GGTAACAGCCGCTA TTTA TACCGACTGTTTCC GAAAGGTCCGGCTAA tusE 2156914 - 2157243 + | sulfurtransferase tusE EcSMS35_2149 2157518 - 2157240 - | acylphosphatase EcSMS35_2151 2157613 - 2158803 + | hypothetical protein EcSMS35_2152 2158861 - 2159178 + | hemimethylated DNA-binding protein TERM 2826 2159218 - 2159191 - Tf 100 -17.1 -4.1673 | opp_overlap 2159191 TAATCCCTGAACAAA TCCCCGGAAGG TTTTTG CCTTCCGGGGA TTTTTTATTTGGCCA TERM 2827 2159191 - 2159218 + TF 100 -17.8 -5.63517 | opp_overlap 2159191 TAATCCCTGAACAAA TCCCCGGAAGGT TTTT GCCTTCCGGGGA TTTTTTATTTGGCCA EcSMS35_2153 2159636 - 2159223 - | putative CoA-binding protein TERM 2828 2159458 - 2159476 + gF 78 -8.8 -4.08064 | overlap 2159460 GCCAGCGTGCCATAC CCCTGCTG GCC CAGCAGTG TTTTGCCGGCAACTT TERM 2829 2159460 - 2159474 + gF 78 -10 -3.63744 | overlap 2159458 CAGCGTGCCATACCC CTGCTG GCC CAGCAG TGTTTTGCCGGCAAC EcSMS35_2154 2159599 - 2159769 + | hypothetical protein TERM 2830 2159970 - 2159922 - g 81 -7.3 -4.62336 | overlap 2159923 ACTCGACGGTAAAAA GGTTTCCAGCTCTCTGCTGCGCG GTG CGGACAGCATTGAACTGGATAAC GGACCGCATCAGTTA EcSMS35_2155 2159809 - 2160471 + | hypothetical protein TERM 2831 2160481 - 2160494 + F 86 -8.1 -4.7889 | overlap 2160477 TCCTGAGATTTTTGT GCCTG TGCG CAGGC TTTTTCGGTCTTTAT mgsA 2160568 - 2161026 + | methylglyoxal synthase TERM 2832 2161034 - 2161053 + T 100 -13.6 -4.24711 | opp_overlap 2161030 2161027 TGAAGTAATATTGCA CAGGTGGC AAAC GCCACCTG TTTCTTACGGTTTTC helD 2163112 - 2161058 - | helicase IV TERM 2833 2163314 - 2163328 + G 75 -5 -4.74103 | TGTTGGCGACTCTGG TCAGTA TTG TGCTGA TTTTTACCTTACCGC TERM 2834 2163649 - 2163637 - g 71 -9.1 -3.52906 | overlap 2163635 GTATCGGTAGAAACA GCGCA AGC TGCGC GTGAAGCCAATGCAC EcSMS35_2158 2163235 - 2163681 + | hypothetical protein TERM 2835 2164546 - 2164571 + G 72 -8.3 -3.745 | gap 1, overlap 2164549 ATGTCGATGCAGGGC CAGGCGTGCCAG CAA CTGTCACGC-TG TATTTTGCTGCGTCA TERM 2836 2164549 - 2164569 + G 78 -11.1 -3.45073 | overlap 2164546 TCGATGCAGGGCCAG GCGTGCCAG CAA CTGTCACGC TGTATTTTGCTGCGT TERM 2837 2164956 - 2164967 + G 72 -4.4 -4.62441 | TCACGGGTATTGGAT CTTG CTGA CAAG TTTGTTTGTCTGCCA TERM 2838 2165098 - 2165124 + G 77 -2.9 -5.16572 | gap 1, overlap 2165091 2165092 2165091 2165100 2165102 CTGGAAGGGCAGCTG GTGC-TGCTGGT TATT ACCGGCGTGCTC TTTTTTGCCTTCCGT EcSMS35_2160 2163691 - 2165853 + | hypothetical protein EcSMS35_2159 2166445 - 2165816 - | TfoX family protein sulA 2166664 - 2167173 + | cell division inhibitor SulA EcSMS35_2161 2167327 - 2167157 - | hypothetical protein ompA 2167505 - 2168581 + | outer membrane protein A TERM 2839 2168601 - 2168616 + T 100 -11.8 -5.82388 | opp_overlap 2168601 TCGTCTGGTAAAAAA CCCCGC AGCT GCGGGG TTTTTTTTCGCCTTT TERM 2840 2168616 - 2168601 - T 100 -11.8 -5.00616 | opp_overlap 2168601 TCGTCTGGTAAAAAA CCCCGC AGCT GCGGGG TTTTTTTTCGCCTTT EcSMS35_2164 2169109 - 2168657 - | hypothetical protein EcSMS35_2165 2169295 - 2171055 + | S16 family peptidase fabA 2171124 - 2171642 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA TERM 2841 2171697 - 2171667 - T 87 -8.2 -4.96762 | opp_overlap 2171670 2171674, overlap 2171669 2171674 GACAGAGTATAAAAA GGCGAAACCTCCGC AAT GCGGAGGTTTCTTT TTAAAGAGACAGAAT TERM 2842 2171695 - 2171669 - T 93 -15.2 -2.73099 | opp_overlap 2171670 2171674, overlap 2171667 2171674 CAGAGTATAAAAAGG CGAAACCTCCGC AAT GCGGAGGTTTCT TTTTAAAGAGACAGA TERM 2843 2171670 - 2171694 + T 100 -18.7 -4.56597 | opp_overlap 2171669 2171667 2171674, overlap 2171674 AGAGTATAAAAAGGC GAAACCTCCGC AAT GCGGAGGTTTC TTTTTAAAGAGACAG TERM 2844 2171690 - 2171674 - T 100 -13.7 -3.82067 | opp_overlap 2171670 2171674, overlap 2171669 2171667 TATAAAAAGGCGAAA CCTCCGC AAT GCGGAGG TTTCTTTTTAAAGAG TERM 2845 2171674 - 2171690 + T 100 -13.7 -4.85782 | opp_overlap 2171674 2171669 2171667, overlap 2171670 TATAAAAAGGCGAAA CCTCCGC AAT GCGGAGG TTTCTTTTTAAAGAG TERM 2846 2171946 - 2171920 - T 73 -3 -5.07652 | overlap 2171922 2171934 TGGTGGAAAAGAAAA CAGTGATTAC TAAATGT GCAATCACAG TTAAGCAATACCGCG TERM 2847 2172086 - 2172112 + T 93 -12.2 -3.82202 | opp_overlap 2172086 2172101 TTAGAGACAAAAAAA CCGCCTCAGGCA ACA TACCGGAGGCGG TTATATTTACAAATC TERM 2848 2172112 - 2172086 - T 100 -14.4 -5.76633 | opp_overlap 2172086, overlap 2172101 TTAGAGACAAAAAAA CCGCCTCAGGCA ACA TACCGGAGGCGG TTATATTTACAAATC EcSMS35_2167 2172698 - 2172135 - | putative lipoprotein pqiB 2174335 - 2172695 - | paraquat-inducible protein B TERM 2849 2173545 - 2173531 - G 70 -4.3 -4.58424 | GATCATCATACAAAA CGAAA GCTGT TTTCG GTGCCACTGGCTGCC TERM 2850 2174153 - 2174167 + g 79 -10 -3.76048 | GCTACGGCTTTTAAT GGTGGT TTT ACCACC TTCTATTCCTTCCGC pqiA 2175593 - 2174340 - | paraquat-inducible protein A TERM 2851 2175195 - 2175179 - G 72 -4.3 -4.62069 | opp_overlap 2175179 TTTTGAGTTGAAAAA GCACCCG TGC CAGTTGC TCTTTTAAACGGACC TERM 2852 2175649 - 2175677 + r 82 -8.9 -4.21936 | overlap 2175650 AAAGTGTTGGTTTTC ATGCCTGATAAAC CCA GTTCATCAGGCAA TTTTACCGTTGTCAG TERM 2853 2175650 - 2175676 + r 83 -12.4 -3.1268 | overlap 2175649 AAGTGTTGGTTTTCA TGCCTGATAAAC CCA GTTCATCAGGCA ATTTTACCGTTGTCA uup 2177630 - 2175723 - | ABC transporter, ATP-binding protein TERM 2854 2175982 - 2175992 + g 74 -8.2 -3.88925 | ACAGTTTCTGCTTTT GCCG CGG CGGC TTCTTCGGTTTTTTT EcSMS35_2171 2179750 - 2177642 - | RNA methylase family protein TERM 2855 2180367 - 2180350 - g 75 -5.5 -4.62069 | opp_overlap 2180363 2180363 CGGCCAGTGTAAAAA TGGAGCA ATTC CGCCCCA ATCTGGTGGTTTCCG TERM 2856 2180775 - 2180759 - g 74 -8.7 -3.90922 | ATTTCGTGGAAATAA CCAACAG GTG CTGCTGG AGCAATTAGAAAATC EcSMS35_2173 2179848 - 2180957 + | MOSC domain-containing protein EcSMS35_2172 2181496 - 2180954 - | hypothetical protein TERM 2857 2181222 - 2181207 - G 71 -2.5 -4.88918 | CCATGGGAAACAAAA TGCCA GCTTTT CGGCA TTTGCGGTTTGAGAT TERM 2858 2181648 - 2181605 - R 93 -13.5 -3.22448 | opp_overlap 2181615 2181616 2181618, overlap 2181612 2181616 AGCAACAGTGATGAA TATAAAACAACCAGGGCTT AAAATA AAGCCCTGATTATCTTATA AAGAGGAATTCGAAG TERM 2859 2181641 - 2181612 - R 91 -9.4 -4.70583 | opp_overlap 2181615 2181616 2181618, overlap 2181605 2181616 GTGATGAATATAAAA CAACCAGGGCTT AAAATA AAGCCCTGATTA TCTTATAAAGAGGAA TERM 2860 2181637 - 2181616 - R 74 -10.2 -3.25442 | opp_overlap 2181616 2181615 2181618, overlap 2181612 2181605 TGAATATAAAACAAC CAGGGCTT AAAATA AAGCCCTG ATTATCTTATAAAGA TERM 2861 2181616 - 2181637 + r 72 -10.2 -2.84745 | opp_overlap 2181612 2181605 2181616, overlap 2181615 2181618 TGAATATAAAACAAC CAGGGCTT AAAATA AAGCCCTG ATTATCTTATAAAGA pyrD 2182680 - 2181670 - | dihydroorotate oxidase TERM 2862 2182068 - 2182081 + g 72 -5.3 -4.47707 | TATGGTGCATCGCTT GCAAA TCAT TTTGC TTATTTTTAATCGCG EcSMS35_2175 2183480 - 2182791 - | periplasmic pilus chaperone family protein EcSMS35_2176 2184006 - 2183494 - | fimbrial protein TERM 2863 2183851 - 2183837 - G 76 -4.2 -4.91109 | overlap 2183838 TTCCCATGAGAAAAA CGTGTC AGC GAGACG TCGCCTAACTGCACA EcSMS35_2177 2184469 - 2184017 - | fimbrial protein EcSMS35_2178 2185641 - 2184571 - | putative fimbrial protein EcSMS35_2179 2188232 - 2185632 - | outer membrane usher protein fimD-like protein TERM 2864 2187270 - 2187244 - G 72 -5.8 -4.32951 | overlap 2187247 2187267 ATTTCAACCAACAAA TCACCACTCGAC GAC GTAGAGTAGAGA TCACTAATCTCAAAA TERM 2865 2187314 - 2187324 + g 72 -5.4 -4.47217 | opp_overlap 2187314 CATAAGTTTGATAGA TGGT GTA ACCA TTTTGCTTAATCGTT EcSMS35_2180 2188931 - 2188257 - | periplasmic pilus chaperone family protein TERM 2866 2189014 - 2188980 - R 95 -7.3 -5.42259 | gap 1, opp_overlap 2188984 2188987, overlap 2188984 2188986 2188987 TCACTCTTAAAAAAA TGAATATCCCCTCCAG GACA CTGGAAGGG-TATTAA TTAATTAAAAATTAA TERM 2867 2189010 - 2188984 - R 74 -8.1 -4.03885 | gap 1, opp_overlap 2188984 2188987, overlap 2188980 2188986 2188987 TCTTAAAAAAATGAA TATCCCCTCCAG GACA CTGGAAGGG-TA TTAATTAATTAAAAA TERM 2868 2189009 - 2188986 - R 72 -8.8 -3.59495 | opp_overlap 2188984 2188987, overlap 2188984 2188980 2188987 TTAAAAAAATGAATA TCCCCTCCAG GACA CTGGAAGGGT ATTAATTAATTAAAA TERM 2869 2189008 - 2188987 - R 82 -12.3 -2.7407 | opp_overlap 2188984 2188987, overlap 2188986 2188984 2188980 TAAAAAAATGAATAT CCCCTCCAG GACA CTGGAAGGG TATTAATTAATTAAA TERM 2870 2188987 - 2189008 + r 76 -10.1 -3.29727 | opp_overlap 2188987 2188986 2188984 2188980, overlap 2188984 TAAAAAAATGAATAT CCCCTCCAG GACA CTGGAAGGG TATTAATTAATTAAA EcSMS35_2181 2189578 - 2189039 - | putative fimbrial protein TERM 2871 2189708 - 2189720 + H 78 -6.3 -4.69214 | AATCTTTTATTTATA GATTC CAT GAATC TTTCTTTATTACCTG EcSMS35_2182 2189933 - 2190508 + | NADPH-dependent FMN reductase TERM 2872 2191416 - 2191404 - g 74 -3.3 -5.00616 | CTGGTGCCGAAAAAA GTCGA TAT TCGCC AGCGCATCTGGCAAC EcSMS35_2183 2190501 - 2191460 + | aliphatic sulfonate ABC transporter periplasmic substrate-binding protein ssuD 2191457 - 2192602 + | alkanesulfonate monooxygenase, FMNH(2)-dependent EcSMS35_2185 2192611 - 2193405 + | putative sulfonate ABC transporter, permease protein TERM 2873 2193947 - 2193957 + G 75 -6.8 -4.30576 | opp_overlap 2193947 GCTTTGGCAGAAGCA CGGT TTT ACCG TTTTGCTGGTGACGC EcSMS35_2186 2193402 - 2194169 + | ABC transporter, ATP-binding protein TERM 2874 2194208 - 2194171 - T 77 -9.8 -3.63589 | opp_overlap 2194175, overlap 2194163 2194161 2194172 GAAAACAGGGGTAAA TTCCCCGAATGGCGGC GCTATT GCCGCCATTCGGTTAT TTATCAAGCCAGTGC TERM 2875 2194207 - 2194172 - T 85 -13.3 -2.77431 | opp_overlap 2194175, overlap 2194163 2194161 2194171 AAAACAGGGGTAAAT TCCCCGAATGGCGGC GCTATT GCCGCCATTCGGTTA TTTATCAAGCCAGTG TERM 2876 2194175 - 2194204 + T 100 -20.1 -4.06419 | opp_overlap 2194163 2194161 2194172 2194171 ACAGGGGTAAATTCC CCGAATGGCGGCG CTAT TGCCGCCATTCGG TTATTTATCAAGCCA pepN 2196824 - 2194212 - | aminopeptidase N TERM 2877 2194282 - 2194294 + g 70 -4.7 -4.47328 | overlap 2194283 CCTTTCAACTGCTCC AGCGC CGC GCGCA TTTTCTCCTGACGTT EcSMS35_2188 2196982 - 2196860 - | hypothetical protein pncB 2197090 - 2198292 + | nicotinate phosphoribosyltransferase TERM 2878 2198301 - 2198318 + F 100 -9.1 -5.22943 | opp_overlap 2198298 CAGTTAATATCATCA GGGAGCT AATC GGCTCCC TTTTTTACCTTTAAT asnS 2198460 - 2199860 + | asparagine tRNA synthetase TERM 2879 2199875 - 2199894 + F 100 -13.6 -5.75599 | opp_overlap 2199877 ATTTAGCGTCTTCAA GAGCCAGC GCCC GCTGGCTC TTTTTTTATCCTTTC TERM 2880 2199892 - 2199877 - f 73 -10.4 -3.02144 | opp_overlap 2199875 TTAGCGTCTTCAAGA GCCAGC GCCC GCTGGC TCTTTTTTTATCCTT TERM 2881 2200011 - 2200037 + F 100 -6.6 -5.4833 | opp_overlap 2200012, overlap 2200012 2200015 ATTTGCGCACAAAAA ATAATCCGCATT CTT ATTGCGGATTAG TTTTTTCTTAGCTGA TERM 2882 2200012 - 2200036 + F 82 -10.1 -3.87914 | opp_overlap 2200012, overlap 2200011 2200015 TTTGCGCACAAAAAA TAATCCGCATT CTT ATTGCGGATTA GTTTTTTCTTAGCTG TERM 2883 2200036 - 2200012 - f 100 -10.1 -5.24129 | opp_overlap 2200012 2200011 2200015 TTTGCGCACAAAAAA TAATCCGCATT CTT ATTGCGGATTA GTTTTTTCTTAGCTG TERM 2884 2200015 - 2200033 + F 72 -7.4 -4.04157 | opp_overlap 2200012, overlap 2200012 2200011 GCGCACAAAAAATAA TCCGCATT CTT ATTGCGGA TTAGTTTTTTCTTAG TERM 2885 2200172 - 2200142 - f 78 -5.6 -5.02323 | opp_overlap 2200142 CCATCAGAAACAAAA TTTCCTTTTAGTTA ATT TAAATATAAGGAAA TCATATAAATAGATA TERM 2886 2200713 - 2200683 - g 76 -9.1 -3.72621 | gap 1, opp_overlap 2200681, overlap 2200675 2200679 GGAAACACAAATCAA TTCCGATCTGACCG GCTA CGGTCAG-TGGGAA TATAACTTCCAGGGT ompF 2200462 - 2201535 + | outer membrane protein F TERM 2887 2201582 - 2201567 - f 93 -9 -5.07107 | opp_overlap 2201567 TAAATGCCGAAAAAA CAGGAC GTTG GTCCTG TTTTTTTTATGCCTT TERM 2888 2201567 - 2201582 + F 100 -9 -5.97575 | opp_overlap 2201567 TAAATGCCGAAAAAA CAGGAC GTTG GTCCTG TTTTTTTTATGCCTT TERM 2889 2202233 - 2202211 - g 89 -14.2 -3.18912 | opp_overlap 2202200 CGATGCACTGATTAA CAGCCTGAAC GAA GCTCAGGCTG GCGACGTAGTGCTGT aspC 2201720 - 2202910 + | aspartate transaminase TERM 2890 2202927 - 2202945 + T 100 -11.7 -5.30686 | opp_overlap 2202923 2202927 GGCTAGTTAAACGAA GCCCGCT GTGAA AGCGGGC TTTTTTATACGTCTT TERM 2891 2202945 - 2202927 - T 88 -11.7 -3.54408 | opp_overlap 2202927, overlap 2202923 GGCTAGTTAAACGAA GCCCGCT GTGAA AGCGGGC TTTTTTATACGTCTT EcSMS35_2193 2203607 - 2202960 - | metallo-beta-lactamase family protein EcSMS35_2194 2204182 - 2203634 - | Tat pathway signal sequence domain-containing protein TERM 2892 2204278 - 2204237 - R 74 -9.6 -3.28791 | gap 1, overlap 2204260 ACTTCTGGCGCACAA GAGGCACCTTAACCGTCAG TAAAG CTGAC-GTCAAGATGACTC AACCCCAGCAGTGAC EcSMS35_2195 2206210 - 2204363 - | peptidoglycan binding domain-containing protein TERM 2893 2206464 - 2206447 - R 100 -12.7 -4.84918 | opp_overlap 2206443 2206442 TTCAGAAATAGAAAA GGCGGCA TCGC TGCCGCC TCAATCTTAGCTCGC mukB 2210931 - 2206471 - | chromosome partition protein MukB TERM 2894 2209544 - 2209559 + g 81 -4.7 -5.10497 | GCCATGCTCATTTTC TGCTC AAGAGA GAGCA TTTTTTCGGTCGCTT TERM 2895 2209696 - 2209742 + g 70 -6.5 -4.15565 | gap 1, opp_overlap 2209737, overlap 2209700 GTTATACTGGATCGC GCGCGTTTGCTGGACGTCCAGC GCCT GCTGGTAGTC-AGCAAGCTGGC TTTTCAGCTCGTCCA mukE 2211635 - 2210931 - | chromosome partition protein MukE TERM 2896 2211564 - 2211549 - G 70 -10.4 -3.17075 | GCGGCCTGAACGTAA GGCGCT ATCC AGCGCC GGAAATAACGGATTC mukF 2212938 - 2211616 - | chromosome partition protein MukF TERM 2897 2211770 - 2211741 - G 78 -9.3 -3.99374 | gap 1, opp_overlap 2211739, overlap 2211742 2211758 CCTGATCAATAACAA TGCGCGCAACGTCA AAG TGACGT-GCACGCG GATACTGTGACAGAT TERM 2898 2211769 - 2211742 - G 79 -12.8 -2.99142 | gap 1, opp_overlap 2211739, overlap 2211741 2211758 CTGATCAATAACAAT GCGCGCAACGTCA AAG TGACGT-GCACGC GGATACTGTGACAGA TERM 2899 2211798 - 2211827 + g 70 -5.7 -4.36914 | gap 1, opp_overlap 2211758 GATATTCGCGTACCA CCAGACCAAGATCC AGC GGCACTTG-TCTGG TTTTGTACACGGCAA TERM 2900 2212060 - 2212089 + g 77 -8.7 -4.0641 | AGCAAAGACGCGGTT TTTATCCATATCG ATTG CGGTACGGATAAA TTTGTGTACGTGGCG smtA 2213720 - 2212935 - | SmtA protein TERM 2901 2213174 - 2213189 + g 100 -2.4 -5.93252 | overlap 2213176 GGTCGCGTGGATAAT CTGGCG AAAG CGTCCG TTTTTTCTTTTTCGG EcSMS35_2201 2213856 - 2214635 + | hypothetical protein EcSMS35_2200 2215505 - 2214612 - | hypothetical protein kdsB 2216405 - 2215659 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase EcSMS35_2203 2216584 - 2216402 - | hypothetical protein EcSMS35_2204 2217868 - 2216636 - | hypothetical protein TERM 2902 2216910 - 2216900 - G 70 -6.8 -4.00512 | opp_overlap 2216900 2216899 CGGCAGAACAAAATA GCCA TAC TGGC GTTTCGGCGCAGGGG TERM 2903 2216970 - 2216959 - G 74 -2.2 -5.10154 | gap 1, opp_overlap 2216959 AGCTAAAATCAAAAA GCTGC TCT GC-GC GTTTGCGATCCCAGA lpxK 2218891 - 2217905 - | tetraacyldisaccharide 4'-kinase TERM 2904 2218485 - 2218495 + g 75 -6.8 -4.4009 | ACATCAGGGTGTTGC GCCA GAA TGGC TTTTATCGCATCAGA TERM 2905 2218756 - 2218780 + g 75 -5.5 -4.61873 | overlap 2218761 CCACGACAACCGGTA CGGGGGCACGC CAG GCGCGCTTCAG TTTTAGTTTATAGCA TERM 2906 2218856 - 2218837 - G 75 -11.4 -2.88677 | overlap 2218798 CATACAACCAGGAGA GTGGCAGC AATA GCCGCCAC AAAGGGGATTCACCA msbA 2220636 - 2218888 - | lipid A export permease/ATP-binding protein MsbA TERM 2907 2219794 - 2219781 - G 77 -6.7 -4.44211 | TTGAAGAGAAAACAA CGGTA ATCG TACCG GCAGTCAGGCTATCC EcSMS35_2207 2222937 - 2220673 - | DNA internalization-related competence protein ComEC/Rec2 TERM 2908 2221952 - 2221926 - G 84 -3.6 -5.22312 | overlap 2221910 2221929 2221930 ACTGATACCAAAAAA TCAGTGCCGC GACCGCA GCGGCAGAGA GCCATAAACTTTGCG TERM 2909 2223121 - 2223091 - R 81 -9.8 -4.11404 | opp_overlap 2223099, overlap 2223092 2223099 TCCAGATTAGAGAAA TGAAAAAAGCACCC GAC AGGTGCTTTTCTCG CGTTCAAGTTTGAGT TERM 2910 2223120 - 2223092 - R 86 -13.3 -3.0636 | opp_overlap 2223099, overlap 2223091 2223099 CCAGATTAGAGAAAT GAAAAAAGCACCC GAC AGGTGCTTTTCTC GCGTTCAAGTTTGAG TERM 2911 2223099 - 2223113 + r 77 -7.1 -4.42788 | opp_overlap 2223092 2223091 2223099 AGAGAAATGAAAAAA GCACC CGACA GGTGC TTTTCTCGCGTTCAA TERM 2912 2223113 - 2223099 - R 95 -7.8 -5.4387 | opp_overlap 2223099, overlap 2223092 2223091 AGAGAAATGAAAAAA GCACCC GAC AGGTGC TTTTCTCGCGTTCAA ihfB 2223427 - 2223143 - | integration host factor, beta subunit TERM 2913 2223478 - 2223508 + r 90 -12.7 -3.33696 | gap 1, opp_overlap 2223484, overlap 2223480 2223484 TGCTGTTGCTGCATT G-ATTAAGGGCGGC CGTA GCCGCCCTTAGTGC TTGATTACAGGACGA TERM 2914 2223480 - 2223505 + r 93 -15.5 -2.84098 | opp_overlap 2223484, overlap 2223478 2223484 CTGTTGCTGCATTGA TTAAGGGCGGC CGTA GCCGCCCTTAG TGCTTGATTACAGGA TERM 2915 2223501 - 2223484 - R 95 -14.1 -3.18264 | opp_overlap 2223480 2223478 2223484 TGCTGCATTGATTAA GGGCGGC CGTA GCCGCCC TTAGTGCTTGATTAC TERM 2916 2223484 - 2223501 + r 100 -14.1 -3.30554 | opp_overlap 2223484, overlap 2223480 2223478 TGCTGCATTGATTAA GGGCGGC CGTA GCCGCCC TTAGTGCTTGATTAC TERM 2917 2223576 - 2223555 - R 84 -9.5 -4.29929 | overlap 2223571 AGTAAACTCAACAAA CTTCGGAAT AAAA ATCCCGAAG AGTCAGAGAATTACT rpsA 2225260 - 2223587 - | ribosomal protein S1 TERM 2918 2225086 - 2225096 + g 88 -8.2 -4.63527 | overlap 2225079 2225083 CCTGGATTTCCAGCT CGCC CTG GGCG TTTTTGAACTGCTCA cmk 2226054 - 2225371 - | cytidylate kinase TERM 2919 2225502 - 2225514 + g 70 -6.9 -4.04806 | CCGCTCGGTTACGAT CGCGG TCG TCGCG TTCTTTGATCTCGGC TERM 2920 2225735 - 2225698 - G 81 -10.5 -3.57561 | opp_overlap 2225733, overlap 2225730 TGGTAATTCGCGAAA CGCGCGTTGGCGACGCA ATAA TGCTTCACGAACGCGTG GGAATGCCGCGACTT TERM 2921 2226111 - 2226091 - R 75 -8.9 -3.66784 | opp_overlap 2226074, overlap 2226074 GTACCGTTAACATAA CCGCGCGCA TTA TACGCGCCG ACGCCACAAATCGTT EcSMS35_2211 2226991 - 2226227 - | M48B family peptidase TERM 2922 2227116 - 2227145 + r 88 -9.3 -4.59109 | overlap 2227118 CGGCAATGTGCCGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2923 2227118 - 2227143 + r 100 -16.3 -3.90762 | overlap 2227116 GCAATGTGCCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG EcSMS35_2212 2228455 - 2227127 - | IS4 transposase TERM 2924 2228463 - 2228488 + r 75 -9.1 -3.61398 | opp_overlap 2228463 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 2925 2228488 - 2228463 - R 100 -9.8 -5.61596 | opp_overlap 2228463 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC aroA 2229882 - 2228599 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2926 2229933 - 2229913 - R 100 -12.6 -5.4659 | CAACAGAAATAAAAA CCCCACAG GCTGG CTGTGGGG ATTAAGCAAAATTTC serC 2231041 - 2229953 - | phosphoserine aminotransferase TERM 2927 2230424 - 2230445 + g 73 -3.7 -4.82901 | gap 1, opp_overlap 2230417, overlap 2230426 ACGAACGATGACGAT TGTCAGGCCT GCC GGGCC-GATA TTTTTCTGCGCGCCA EcSMS35_2215 2231932 - 2231240 - | hypothetical protein TERM 2928 2231798 - 2231785 - G 77 -5.9 -4.66953 | overlap 2231774 TTAACACTTCAAAAA GCGAC ATCT GCCGC ACACCGCGTCTTCCG TERM 2929 2231906 - 2231889 - G 77 -6.3 -4.62054 | CCAAGGAAATCAAAA GGCACTT TATC AAATGCC ATACGGTGGAGATCG TERM 2930 2233476 - 2233466 - g 75 -6.8 -4.41047 | overlap 2233467 ATCGGTGAATTAAAA GCCA TGC TGGC GCTGGCTGGTGGCGA TERM 2931 2233696 - 2233708 + G 70 -4.7 -4.4715 | opp_overlap 2233695, overlap 2233695 CAGTGCGGCAATGAG CGGCG AAG CGGCG TTTTATGGCTTGCAA EcSMS35_2216 2232062 - 2233822 + | hypothetical protein TERM 2932 2233825 - 2233855 + F 100 -16.4 -3.30453 | opp_overlap 2233825, overlap 2233830 CTGGGCAAAATAAAA TCAAATAGCCTACG CAA TGTAGGCTATTTGA TTCATCTGAGTTATA TERM 2933 2233855 - 2233825 - f 100 -15.7 -5.07652 | opp_overlap 2233825 2233830 CTGGGCAAAATAAAA TCAAATAGCCTAC GCAAT GTAGGCTATTTGA TTCATCTGAGTTATA TERM 2934 2233830 - 2233850 + F 82 -10.5 -3.98282 | opp_overlap 2233825, overlap 2233825 CAAAATAAAATCAAA TAGCCTACG CAA TGTAGGCTA TTTGATTCATCTGAG TERM 2935 2233873 - 2233897 + F 71 -7.8 -3.78962 | opp_overlap 2233874, overlap 2233874 CATCTGAGTTATATT ACGGGGCGTT TTTTT AATGCCCCGC TTTACATATATTTGC TERM 2936 2233874 - 2233896 + F 78 -11.3 -2.86654 | opp_overlap 2233874, overlap 2233873 ATCTGAGTTATATTA CGGGGCGTT TTTTT AATGCCCCG CTTTACATATATTTG EcSMS35_2217 2234228 - 2235085 + | putative formate transporter FocA pflB2 2235140 - 2237422 + | formate acetyltransferase TERM 2937 2237497 - 2237453 - f 83 -7.2 -4.80882 | gap 1, opp_overlap 2237465, overlap 2237454 2237465 ATCGTACAGTAAAAA GCGTAC-AATAAAGGCTCCAC GAAA GTGGGGCCTTTTTTAGCACGA GAGCCTTTTTTGTCA TERM 2938 2237496 - 2237454 - f 81 -10.7 -3.47806 | gap 1, opp_overlap 2237465, overlap 2237453 2237465 TCGTACAGTAAAAAG CGTAC-AATAAAGGCTCCAC GAAA GTGGGGCCTTTTTTAGCACG AGAGCCTTTTTTGTC TERM 2939 2237484 - 2237465 - f 85 -9.2 -4.33851 | opp_overlap 2237465, overlap 2237454 2237453 AAAGCGTACAATAAA GGCTCCAC GAAA GTGGGGCC TTTTTTAGCACGAGA TERM 2940 2237465 - 2237484 + F 100 -11.4 -5.00616 | opp_overlap 2237465 2237454 2237453 AAAGCGTACAATAAA GGCTCCAC GAAA GTGGGGCC TTTTTTAGCACGAGA TERM 2941 2237791 - 2237808 + G 72 -7.7 -3.87869 | opp_overlap 2237791 GATTTGATGAAGGAA GTGGTGA CCTA TCGCCAC TTTATGAACGCTTCC TERM 2942 2237919 - 2237936 + G 71 -2.7 -4.75219 | gap 1 AGAAGGCATTCATAC CTGTCTGG ATA CCA-ACGG TTTTGTTCGTCGTTA pflA 2237614 - 2238354 + | pyruvate formate-lyase 1-activating enzyme TERM 2943 2238390 - 2238367 - T 93 -12.5 -3.53761 | opp_overlap 2238367 TAATTTCCCCGTAAA GCGGCAACT TTATTG AGTTGCCGC TTTTTTATTCCGTGC TERM 2944 2238367 - 2238390 + T 100 -13.2 -5.4833 | opp_overlap 2238367 TAATTTCCCCGTAAA GCGGCAACTT TATT GAGTTGCCGC TTTTTTATTCCGTGC EcSMS35_2220 2239994 - 2238564 - | amino acid permease family protein TERM 2945 2239896 - 2239874 - G 84 -4 -5.17353 | opp_overlap 2239878, overlap 2239877 2239878 2239880 ACACCCATGAAAAAA CAACCACCAG CCC CTGGTTGGCG TAGTTATTAACAACG TERM 2946 2239893 - 2239877 - G 77 -6.5 -4.67552 | opp_overlap 2239878, overlap 2239874 2239878 2239880 CCCATGAAAAAACAA CCACCAG CCC CTGGTTG GCGTAGTTATTAACA TERM 2947 2239944 - 2239970 + g 71 -3 -4.73388 | gap 1, opp_overlap 2239944 AGTGATAAAAGACAT CAGC-GCAATG TTGTAC CATCGCAGCTG TTTTTCCTGAACATT TERM 2948 2240192 - 2240163 - R 100 -10.9 -6.08342 | opp_overlap 2240162 2240161 2240165 GAAGAAACAAAAAAA CAGAGTGTGAA ACAGTAAG TTCACACTCTG CGTTAATTCATTTAC EcSMS35_2221 2241352 - 2240204 - | major facilitator family transporter TERM 2949 2241418 - 2241408 - g 70 -4 -4.59773 | TGCCACCGCCAAAAA CATT GTC AATG GGTGAAAATACGCGC EcSMS35_2222 2241383 - 2241511 + | hypothetical protein EcSMS35_2223 2241667 - 2242293 + | isochorismatase family protein TERM 2950 2242323 - 2242296 - T 83 -6.2 -5.04733 | opp_overlap 2242301, overlap 2242301 GAAGCAGAAATAAAA GAGAACCGGGGC CGAA ACCCCGGTTGTT ACTGATTAGCTTGCG TERM 2951 2242301 - 2242318 + T 79 -9.8 -3.77722 | opp_overlap 2242301 2242296 AGAAATAAAAGAGAA CCGGGG CCGAAA CCCCGG TTGTTACTGATTAGC TERM 2952 2242318 - 2242301 - T 82 -10.5 -4.14927 | opp_overlap 2242301, overlap 2242296 AGAAATAAAAGAGAA CCGGGGC CGAA ACCCCGG TTGTTACTGATTAGC dmsC1 2243192 - 2242329 - | anaerobic dimethyl sulfoxide reductase, C subunit dmsB_2 2243811 - 2243194 - | dimethylsulfoxide reductase, B subunit dmsA 2246266 - 2243822 - | anaerobic dimethyl sulfoxide reductase, A subunit TERM 2953 2245276 - 2245290 + g 72 -5.7 -4.4891 | GACCATTTTTCGGCG CACTG GCTGG CAGTG TTTTCTCGTCGTAGC TERM 2954 2246466 - 2246479 + r 91 -9.5 -4.74103 | opp_overlap 2246466 AGGGAGACAAAAAAA GCGCC CGCA GGCGC TTTTTAGATTCAGAA TERM 2955 2246479 - 2246466 - R 100 -9.5 -5.72616 | opp_overlap 2246466 AGGGAGACAAAAAAA GCGCC CGCA GGCGC TTTTTAGATTCAGAA TERM 2956 2246512 - 2246498 - R 70 -2.8 -4.89852 | opp_overlap 2246498 TTAGATTCAGAAAAA TTGGGT ATT AGCCAA TATATTCCAGTCCGT serS 2247797 - 2246505 - | seryl-tRNA synthetase EcSMS35_2228 2249231 - 2247888 - | putative DNA recombination-associated ATPase RarA lolA 2249853 - 2249242 - | outer membrane lipoprotein carrier protein LolA ftsK 2254121 - 2250012 - | DNA translocase FtsK TERM 2957 2252371 - 2252408 + g 74 -3.2 -5.00616 | opp_overlap 2252364 2252366, overlap 2252370 2252368 2252367 AGACTGAAGACTGGC GCGGCAACGGTTGCGG CAGCCC CCGTCGCCAGTGTCGC TTTTTTCACGCCAGA TERM 2958 2254202 - 2254166 - R 78 -8.8 -4.13767 | gap 1, opp_overlap 2254169 2254173, overlap 2254170 2254173 TGCCCGATGCTAAAA CGGACAACAGTACCAGG TTAC CCCAGTACTGTTG-CTG TATGGATTAACAGGA TERM 2959 2254199 - 2254170 - R 86 -13.7 -2.75577 | opp_overlap 2254169 2254173, overlap 2254166 2254173 CGATGCTAAAACGGA CAACAGTACCAGG TTAC CCCAGTACTGTTG CTGTATGGATTAACA TERM 2960 2254196 - 2254173 - R 75 -9.6 -3.52113 | opp_overlap 2254169 2254173, overlap 2254170 2254166 TGCTAAAACGGACAA CAGTACCAGG TTAC CCCAGTACTG TTGCTGTATGGATTA lrp 2254750 - 2254256 - | leucine responsive regulatory protein EcSMS35_2232 2255226 - 2255113 - | hypothetical protein TERM 2961 2255432 - 2255415 - g 81 -6.9 -4.66163 | overlap 2255428 ACCGGCATGGAAAAA GGCGGCC AACT GACCACC ACCACGGAAGTGGAA trxB 2255295 - 2256260 + | thioredoxin-disulfide reductase TERM 2962 2256286 - 2256320 + F 87 -6.5 -5.22794 | gap 1, opp_overlap 2256287 2256290, overlap 2256290 CAGTAACAAAAGTAA AGAAGGCGACACCATG CGAC TATGG-GTCGCCTTTA TTTTTTCCTCGTTGT TERM 2963 2256319 - 2256287 - f 77 -7.1 -4.33854 | gap 1, opp_overlap 2256286 2256290, overlap 2256290 AGTAACAAAAGTAAA GAAGGCGACACCAT GCGACT ATGG-GTCGCCTTT ATTTTTTCCTCGTTG TERM 2964 2256290 - 2256316 + F 93 -9.5 -5.0917 | gap 1, opp_overlap 2256290 2256287, overlap 2256286 AACAAAAGTAAAGAA GGCGACACCATG CGAC TATGG-GTCGCC TTTATTTTTTCCTCG TERM 2965 2256316 - 2256290 - f 80 -8.8 -4.25231 | gap 1, opp_overlap 2256286 2256290, overlap 2256287 AACAAAAGTAAAGAA GGCGACACCAT GCGACT ATGG-GTCGCC TTTATTTTTTCCTCG TERM 2966 2256976 - 2256993 + G 70 -5.5 -4.42653 | TAACTTTCTCGCTCT TGCTCGC TTAA GTGGGCA TTTTCTCGATCGCCT cydD 2256383 - 2258149 + | cysteine ABC transporter permease/ATP-binding protein cudC 2258150 - 2259871 + | cysteine ABC transporter permease/ATP-binding protein TERM 2967 2260036 - 2260048 + G 81 -6.3 -4.7329 | overlap 2260019 CGCCTGTTAATGGCT TACCA GCG TGGTA TTTTTCCGTGGTTTT aat 2259913 - 2260617 + | leucyl/phenylalanyl-tRNA--protein transferase infA 2260902 - 2261120 + | translation initiation factor IF-1 TERM 2968 2261179 - 2261163 - T 100 -12.3 -4.40037 | opp_overlap 2261163 AAAGAACGAGTAAAA GGTCGGT TTA ACCGACC TTTTTATTTTGTGAT TERM 2969 2261163 - 2261179 + T 100 -12.3 -5.56263 | opp_overlap 2261163 AAAGAACGAGTAAAA GGTCGGT TTA ACCGACC TTTTTATTTTGTGAT TERM 2970 2261494 - 2261470 - T 100 -13 -3.4678 | opp_overlap 2261470 ACCGCCAGATTATAA GCGCATGTTA TTGTT TAACATGCGC TTTTTTATTTATCCT TERM 2971 2261470 - 2261494 + T 100 -13 -5.73978 | opp_overlap 2261470 ACCGCCAGATTATAA GCGCATGTTA TTGTT TAACATGCGC TTTTTTATTTATCCT EcSMS35_2239 2262453 - 2261611 - | hypothetical protein TERM 2972 2262508 - 2262486 - R 100 -12 -4.61873 | overlap 2262480 GTTTATAAACGAAAA CGCCAGCC GTATTCA GGCTGGCG TCAGTGGAATGAAGT TERM 2973 2262524 - 2262544 + r 77 -9.7 -3.65812 | opp_overlap 2262523 2262522, overlap 2262526 TCAGTGGAATGAAGT CTGGTGAGT AAG ACTCACCTG TTCTGTTGCAGAAGC TERM 2974 2262526 - 2262542 + r 80 -10.9 -3.41024 | opp_overlap 2262523 2262522, overlap 2262524 AGTGGAATGAAGTCT GGTGAGT AAG ACTCACC TGTTCTGTTGCAGAA EcSMS35_2240 2262735 - 2262538 - | hypothetical protein EcSMS35_2241 2263240 - 2262752 - | hypothetical protein EcSMS35_2242 2263620 - 2263237 - | hypothetical protein TERM 2975 2263685 - 2263664 - R 70 -10.1 -2.55811 | overlap 2263663 2263662 2263676 GAAAAATGGAAAAGT GGCGTGGTG AAAG CACCAGGCC GGAGCAGAAGGCTAT EcSMS35_2243 2264185 - 2263697 - | YagB/YeeU/YfjZ family protein TERM 2976 2263824 - 2263861 + gr 76 -8.5 -4.00042 | gap 1 ACGGTATGCTGATGC CGGGGATTCA-GTTCACC GCT GGTGAGCATGAGTTCCAG TTGTTTCATCAGCAG TERM 2977 2264010 - 2264032 + gr 84 -8.3 -4.35483 | GGCGTCACGATGCAG GGCAGCCCC CACCA GGGGCGGTC TTTGTTGTCGTCGGG EcSMS35_2244 2264771 - 2264088 - | hypothetical protein EcSMS35_2245 2265011 - 2264790 - | hypothetical protein EcSMS35_2246 2265550 - 2265074 - | RadC family DNA repair protein EcSMS35_2247 2266051 - 2265566 - | antirestriction protein EcSMS35_2248 2266961 - 2266143 - | hypothetical protein TERM 2978 2266958 - 2266945 - G 77 -6.7 -4.48987 | TTCGTATAACCAAAA CGACT GGCT AGTCG CATAATTTGCTCCTT TERM 2979 2267028 - 2267003 - R 100 -13.3 -5.04601 | GGTATAAATGAAAAA GCCGCGTCTCC CGGA GAAGACACGGC CTGACAGATGAAATG TERM 2980 2267266 - 2267242 - R 100 -21.5 -4.54727 | TCCCTGAAAGTAAAA GGCCCCGGTCA TTA TGACCGGGGCC TGAAGGGGAGTGACC flu1 2270134 - 2267288 - | antigen 43 TERM 2981 2270193 - 2270166 - R 100 -17.8 -5.45652 | AGGGTGAATAAAAAA GCCGGTACCCAC AAAT GTGGATACCGGC AGGTACAAAACAGCA EcSMS35_2250 2270258 - 2270145 - | hypothetical protein TERM 2982 2270369 - 2270351 - R 72 -7.4 -4.02424 | opp_overlap 2270364, overlap 2270354 2270364 ATTAACCACCATAAA CGATCGAT GAC AACGATCG ATACCTGTTTTATCG TERM 2983 2270388 - 2270364 - R 71 -8.7 -3.43264 | opp_overlap 2270364, overlap 2270351 2270354 AACGATCGATGACAA CGATCGATA CCTGTTT TATCGATCG TTTTATTCTATTAAC TERM 2984 2270364 - 2270388 + r 91 -8.7 -4.90381 | opp_overlap 2270351 2270354 2270364 AACGATCGATGACAA CGATCGATA CCTGTTT TATCGATCG TTTTATTCTATTAAC EcSMS35_2251 2271378 - 2270506 - | putative GTPase TERM 2985 2271433 - 2271408 - H 100 -12.6 -5.06052 | gap 1 TGAAAAAAGACAAAA CCCCGCGCACC GGAAA GGTG-GCGGGG GATTCACGGAGATAA hsdM 2271642 - 2273213 + | type I restriction-modification system, M subunit EcSMS35_2252 2273710 - 2273207 - | IS1 transposase orfB EcSMS35_2254 2273933 - 2273721 - | IS1 transposase orfA TERM 2986 2274003 - 2274027 + r 74 -3.7 -5.01732 | ATTTACAGACAAATT TAAAATTAGCT GAA AGTTAATATTA TTTTTTCGGAGCCTT EcSMS35_2255 2276285 - 2274063 - | glycosyl transferase, group 1/glycosyl transferase, group 2 TERM 2987 2275614 - 2275626 + g 95 -9.1 -4.76478 | AAATACAAGCTCAAC GCCAG AAG CTGGC TTTTCATTTATTTTA TERM 2988 2276715 - 2276737 + G 79 -2 -5.24129 | TAGCGATTTATTCAT CAACAATATT GAT AAGTTTGTTG TTTTTTGTCGCGAAA EcSMS35_2256 2276383 - 2277192 + | hypothetical protein TERM 2989 2277220 - 2277197 - f 100 -15.4 -4.66833 | CGGCAAGTTGAAAAA GGCAGCGTAT AATA ATACGCTGCC TGAAAGCCATATAAC TERM 2990 2277836 - 2277847 + F 70 -5.8 -4.371 | opp_overlap 2277836 2277845, overlap 2277830 GATTCAGCGCCAGAA CGGT ATAA ACCG TTTTGCTCTGATAAC EcSMS35_2257 2278306 - 2279298 + | IS5 transposase TERM 2991 2279335 - 2279320 - T 74 -3.2 -5.03747 | opp_overlap 2279322, overlap 2279322 AAATGGTGGAAAAAA TAGCCT AAAT AGGCTG ATTCGATGTGTTTGC EcSMS35_2258 2280636 - 2279746 - | IS629 transposase orfB TERM 2992 2280313 - 2280325 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA EcSMS35_2259 2280959 - 2280633 - | IS629 transposase orfA TERM 2993 2281508 - 2281535 + r 73 -4.7 -4.74103 | overlap 2281483 2281483 GCCTTTGCCCTCAGT CCCTGACGGCG CAGGCT TGCCGCCACGG TTTTTACGTTAAAGG TERM 2994 2282059 - 2282069 + r 72 -8.2 -3.95435 | overlap 2282058 TTCGGGTAAGTCTCC CCCG TAG CGGG TTGTGTTTTCAGGCA EcSMS35_2261 2283001 - 2282078 - | IS903 transposase TERM 2995 2282797 - 2282777 - G 81 -8.2 -4.34223 | overlap 2282778 AATGGAATCAATAAA GCCCTGCG CAGCC CGCAGGGT CAGCCTGAATACGCG TERM 2996 2282796 - 2282778 - G 77 -11.7 -3.1945 | overlap 2282777 ATGGAATCAATAAAG CCCTGCG CAGCC CGCAGGG TCAGCCTGAATACGC EcSMS35_2262 2284208 - 2283048 - | glycosyl transferase, group 2 TERM 2997 2283481 - 2283471 - G 70 -6.8 -4.12532 | overlap 2283467 CTGCTGACAGATAAA CGCT TTA AGCG CCACCAATGCTTCAA TERM 2998 2284168 - 2284124 - G 86 -9.2 -4.37092 | opp_overlap 2284134, overlap 2284126 2284147 ATGTTTGCGACAAAA CAGTGCTCAATGTGTCGGAA ATATA TCCCGCCGCATTGTGCACAG GGATAATAACGGAAA TERM 2999 2284166 - 2284126 - G 79 -10.4 -3.79419 | opp_overlap 2284134, overlap 2284124 2284147 GTTTGCGACAAAACA GTGCTCAATGTGTCGGAA ATATA TCCCGCCGCATTGTGCAC AGGGATAATAACGGA EcSMS35_2263 2285463 - 2284330 - | glycosyl transferase, group 1 family protein TERM 3000 2285273 - 2285262 - G 71 -3 -4.87133 | AGGCCCGAAAGAAAA TCAA AACG TTGA ATGATTGGGCGACAA EcSMS35_2264 2286366 - 2285476 - | glycosyl transferase, group 2 family protein TERM 3001 2285832 - 2285811 - G 75 -4.5 -4.76478 | overlap 2285812 CAAAATAAAGGAAAA GTTCATCAT AAAT ATGATGAAG GTGCTCATTCAAGAC glf 2287517 - 2286363 - | UDP-galactopyranose mutase EcSMS35_2266 2289428 - 2287536 - | glycosyl transferase family protein TERM 3002 2289148 - 2289162 + g 79 -5 -4.95547 | TTGACTACCCCCCAG TTATCC TCA GGATGA TTTTGTTGTTCTGCA rfbB 2290183 - 2289443 - | O-antigen export system ATP-binding protein RfbB TERM 3003 2289527 - 2289537 + g 83 -5.4 -5.03314 | opp_overlap 2289527 TTCGATCCAAACAAC TCTG TCA CAGA TTTTTTCAACATCAC EcSMS35_2268 2290962 - 2290183 - | O-antigen export system permease protein RfbA EcSMS35_2269 2291713 - 2291850 + | hypothetical protein EcSMS35_2270 2292197 - 2292328 + | hypothetical protein TERM 3004 2292307 - 2292318 + F 72 -5.8 -4.53303 | opp_overlap 2292303 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTGTAAGCGTC EcSMS35_2271 2292408 - 2292560 + | hypothetical protein EcSMS35_2272 2292586 - 2294205 + | ISL3 family transposase TERM 3005 2295509 - 2295527 + T 72 -8.8 -3.57883 | overlap 2295519 GACGGTGCGTACAGT CCCCGCAT TTT ATCCGGGG TTTACCGCATATTCT EcSMS35_2274 2296513 - 2295950 - | hypothetical protein TERM 3006 2296594 - 2296580 - R 79 -7.8 -4.31164 | opp_overlap 2296580, overlap 2296581 CTGAGAGAACATAAA CGCCGT AGC ACGGCA TTAATAAACGAAGTA TERM 3007 2296593 - 2296581 - R 70 -9.1 -3.17975 | opp_overlap 2296580, overlap 2296580 TGAGAGAACATAAAC GCCGT AGC ACGGC ATTAATAAACGAAGT TERM 3008 2296865 - 2296855 - R 78 -5.4 -4.90266 | GCCATTAAGTAAAAA CAGA AAC TCTG TGAGGAAGTCTCACC EcSMS35_2275 2299546 - 2297723 - | hypothetical protein TERM 3009 2300587 - 2300550 - g 76 -10.5 -3.33492 | gap 1, opp_overlap 2300544 CCAGTCACCGTAGAA CGGGCATCC-AGACCCGG GTT CCGGGTAAAGGATTCCCG TCTCACTATGCTTAT EcSMS35_2276 2299911 - 2301476 + | hypothetical protein EcSMS35_2277 2302908 - 2301700 - | phage integrase family site specific recombinase TERM 3010 2302594 - 2302639 + g 71 -3.2 -4.8048 | opp_overlap 2302610 TGCATGTACACGCCT GGCTGCATCGGCAAATGTTG GGATAA CAACTTTTTCAGCTTCAGCC TTTTTAATCTCCAGA TERM 3011 2303096 - 2303115 + r 100 -10 -5.51165 | opp_overlap 2303096 2303094 CATATTTAAAGAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTCGCATTTT TERM 3012 2303340 - 2303313 - R 100 -15 -5.38054 | CCCTACAAACAAAAA GTCCGTAACCTC TTTC GAGATTACGGAC TTCACCAACCTACCA clpA 2305642 - 2303366 - | ATP-dependent Clp protease ATP-binding subunit ClpA TERM 3013 2303460 - 2303500 + g 90 -6.8 -5.11033 | opp_overlap 2303480 2303485 ACCGTCACCTGACCG CCGTCCACCAGCGAAC CAAACAACA GTTCGTTGGCGAGCGG TTTTTTCAGGTTGTC TERM 3014 2304970 - 2304981 + g 70 -7.2 -4.07568 | GCCAGGCAAGACCTT CCGC AATC GCGG TTTTACCGACACCAG TERM 3015 2305665 - 2305678 + r 86 -8.1 -4.85599 | TCCCCCAATTTTTAT GCCTG CATT CAGGC TTTTTCTAGCGTACA clpS 2305993 - 2305673 - | ATP-dependent Clp protease adaptor protein ClpS TERM 3016 2305881 - 2305871 - G 77 -6.8 -4.45738 | opp_overlap 2305871 CACGTCAATAACAAA CTCC ATC GGAG TGTAATCATCATTGA cspD 2306316 - 2306540 + | cold shock domain-containing protein CspD TERM 3017 2306577 - 2306597 + T 100 -12.6 -4.96848 | opp_overlap 2306577 ATCCTAAAGGCAAAA TGCCAGCC CGATC GGCTGGCA TTTTTATCTCAAAAA TERM 3018 2306597 - 2306577 - T 100 -12.6 -4.35926 | opp_overlap 2306577 ATCCTAAAGGCAAAA TGCCAGCC CGATC GGCTGGCA TTTTTATCTCAAAAA macB 2308559 - 2306613 - | macrolide-specific ABC-type efflux carrier protein MacB TERM 3019 2307292 - 2307260 - G 85 -13.5 -3.25823 | CTTCCGCCACACCAA TGACTCTGGCGGGCA TAT TGCCGACCAGAATCA CCTCGCCAACCACAT TERM 3020 2307524 - 2307536 + g 75 -5.5 -4.66163 | overlap 2307518 CAGGTGTGGCTGAGG CGACC CAC GGTTG TTTTTGGATGGCGAT TERM 3021 2308331 - 2308293 - G 72 -4.6 -4.65263 | gap 3, overlap 2308300 ACGCTGGAAAATAAA GCCGAAATGCTCGCGGCGC AGTT GCGCCA-GCGCAT--CGGC GTCCAGCGTGGCAAC macA 2309671 - 2308556 - | macrolide-specific efflux protein MacA TERM 3022 2309945 - 2309956 + G 71 -3 -4.7373 | TGGCATCGCCGTAGT TTTC GCCA GAAA TTTTTGCTGCGCTCG TERM 3023 2310753 - 2310704 - g 90 -6.6 -5.14965 | gap 3, overlap 2310705 2310706 ATCGCCAGTAAAAAA CG-GGCTGAATACCGTCG-GC-GCT ATG AGATGCTCGACGCTATTCAGCCACA AATGGCCACGATGTT TERM 3024 2310750 - 2310706 - g 73 -11.6 -2.80472 | gap 2, overlap 2310705 2310704 CGCCAGTAAAAAACG GGCTGAATACCGTCG-GC-GCT ATG AGATGCTCGACGCTATTCAGCC ACAAATGGCCACGAT EcSMS35_2284 2309786 - 2310778 + | hypothetical protein EcSMS35_2283 2312433 - 2310775 - | hypothetical protein TERM 3025 2312527 - 2312487 - H 78 -10.5 -3.70068 | opp_overlap 2312500 2312501, overlap 2312488 CAGTATAACGGGAAA GGCCATGCTAATACGTGAT GAC ATCACATTTAAGCATGGCA AATGTCTGAAAAATG TERM 3026 2312526 - 2312488 - H 86 -14 -2.81559 | opp_overlap 2312500 2312501, overlap 2312487 AGTATAACGGGAAAG GCCATGCTAATACGTGAT GAC ATCACATTTAAGCATGGC AAATGTCTGAAAAAT aqpZ 2312859 - 2313554 + | aquaporin Z TERM 3027 2313567 - 2313585 + T 100 -8.8 -5.46629 | opp_overlap 2313566 2313567 TAATTAACGCAGAAG GCCTGGCG CAA TGTCAGGC TTTTTTTAAAATGTT TERM 3028 2313713 - 2313670 - T 100 -16.1 -3.07816 | gap 2, overlap 2313673 TTGCCACTGACGCAA GGAGCGCGCAGGGGGCGGC CAATCGCC GCCGCCCCCTGC-C-CCCC GGGCTCTGGCGAACA TERM 3029 2313712 - 2313673 - T 100 -17.8 -2.75712 | overlap 2313670 CCACTGACGCAAGGA GCGCGCAGGGGGCGGC CAATCGCC GCCGCCCCCTGCCCCC CGGGCTCTGGCGAAC TERM 3030 2314043 - 2314085 + T 90 -12.7 -3.39187 | overlap 2314046 AACTTTTTTTCAGCA CCTCGTCAGATTGACTGAC CTTGT GTCAGGCGAGCTGCCGAGG TTGATATTCAGTATT EcSMS35_2286 2315093 - 2314068 - | IS110 family transposase dusC 2316271 - 2315324 - | tRNA-dihydrouridine synthase C TERM 3031 2316312 - 2316291 - H 95 -8.1 -5.42259 | gap 1, opp_overlap 2316294, overlap 2316292 2316294 TCACCCGCAAAAAAA TGAGGCGCTA TGT TAGCGCCT-A TAGTCAACGGATTAA TERM 3032 2316312 - 2316292 - H 79 -9.7 -3.84633 | opp_overlap 2316294, overlap 2316291 2316294 CACCCGCAAAAAAAT GAGGCGCTA TGT TAGCGCCTA TAGTCAACGGATTAA TERM 3033 2316294 - 2316310 + H 82 -12.3 -2.78715 | opp_overlap 2316291 2316292 2316294 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATAGTCAACGGATT TERM 3034 2316310 - 2316294 - H 93 -12.3 -3.49966 | opp_overlap 2316294, overlap 2316291 2316292 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATAGTCAACGGATT TERM 3035 2316334 - 2316373 + H 74 -9.5 -3.32993 | gap 2, opp_overlap 2316339, overlap 2316339 2316341 ACGGATTAAAGGTCT GCA-A-AGAGGGATTGCTG CAAA CTGCAATCCCTCTCTATGC TTGATGTATGCCTGA TERM 3036 2316366 - 2316339 - H 100 -14.2 -3.56594 | opp_overlap 2316339 2316334 2316341 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 3037 2316339 - 2316366 + H 89 -14.2 -3.0281 | opp_overlap 2316339, overlap 2316334 2316341 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 3038 2316341 - 2316364 + H 76 -11 -3.06361 | opp_overlap 2316339, overlap 2316339 2316334 AAAGGTCTGCAAAGA GGGATTGCTG CAAA CTGCAATCCC TCTCTATGCTTGATG TERM 3039 2316566 - 2316585 + G 90 -9.3 -4.4959 | TTTTGTCCTGATTTA TGCCTGC CTGTAT GCAGGCA TTTTCATTGCTTCCC EcSMS35_2288 2316510 - 2316908 + | LrgA family protein TERM 3040 2316937 - 2316949 + G 74 -3.4 -5.00616 | GTGGTCATTACCGCT GACA TTGAT TGTC TTTTTTGCCGCCCGC EcSMS35_2289 2316905 - 2317600 + | LrgB family protein TERM 3041 2317610 - 2317620 + F 80 -6.8 -4.82154 | overlap 2317605 GGCTAAAATTTGCGA TGCG TCG CGCA TTTTTGATGTAAGTT cdd 2317730 - 2318614 + | cytidine deaminase TERM 3042 2318682 - 2318698 + F 86 -10.9 -4.15044 | opp_overlap 2318680 TGGTGTCGAAAATCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC TERM 3043 2319355 - 2319365 + G 79 -4.6 -5.00884 | opp_overlap 2319355 CTTTATATTTTTAAA CGTG AAC CGCG TTTTTTAGGGCCGCT sanA 2318764 - 2319483 + | protein SanA TERM 3044 2319616 - 2319599 - g 75 -5.5 -4.60924 | opp_overlap 2319601, overlap 2319601 TAAACGGGTTAAAAA TGCACCG GAAC CGGTGTA TGTCTGGCGAGCAAA EcSMS35_2292 2319486 - 2319725 + | hypothetical protein TERM 3045 2320216 - 2320226 + G 85 -6.8 -4.76123 | CCCATTGATATCGGT CGCT TAC AGCG TTTTGTTACTGATTT TERM 3046 2320818 - 2320834 + G 88 -11.5 -3.72241 | AAAAGAGTTTGCCAG CGCCCGG GAG CTGGGCG TTTCGATCATTGATG EcSMS35_2293 2319919 - 2321157 + | pyridine nucleotide-disulfide oxidoreductase TERM 3047 2321654 - 2321643 - g 70 -5.8 -4.25104 | TGTCGGGCAGTAAAA CGTG GTTC CACG CTGCCAATGCTGGCG TERM 3048 2321805 - 2321794 - g 74 -5.8 -4.54821 | opp_overlap 2321794, overlap 2321777 ATCTTAATCAGAAAA TCGG TATG CCGA TCGTTAACGGTAAAT EcSMS35_2294 2321151 - 2322386 + | dihydroorotate dehydrogenase family protein TERM 3049 2322435 - 2322390 - T 74 -11.1 -2.58579 | overlap 2322389 2322419 GTAACGTTGTAGAAC CCGCGTCACATCCGGCATTTG GCAC CGAATGCCGGATGCAGCGCAT CCGGCAATACCCACA TERM 3050 2322441 - 2322419 - T 100 -17.8 -3.05816 | overlap 2322390 2322389 GCATTTGGCACCGAA TGCCGGATGC AGC GCATCCGGCA ATACCCACATTCACA mglC 2323467 - 2322457 - | galactose ABC transporter, permease protein TERM 3051 2323492 - 2323529 + r 91 -8.5 -4.96848 | opp_overlap 2323496 2323498 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGTTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2325003 - 2323483 - | galactose ABC transporter, ATP-binding protein TERM 3052 2324363 - 2324378 + g 82 -7.6 -4.54449 | opp_overlap 2324363 2324362 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGTGAGATAT TERM 3053 2325055 - 2325033 - R 100 -14.9 -3.78934 | opp_overlap 2325046, overlap 2325046 TTGGCCCTACAATAA GGGCGCAGT AAACG ACTGCGCCC AATCAGTCTTATTTC mglB 2326062 - 2325064 - | galactose ABC transporter, periplasmic galactose-binding protein TERM 3054 2325165 - 2325181 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAAATCA galS 2327382 - 2326342 - | transcriptional regulator GalS EcSMS35_2299 2328681 - 2327524 - | hypothetical protein TERM 3055 2328277 - 2328293 + g 84 -8 -4.59773 | CAGATAAAGCATGAC GCCTGT ATTAA ACAGGC TTTTTACCGATGGCG TERM 3056 2328584 - 2328614 + g 71 -9.1 -3.44848 | gap 1, opp_overlap 2328587 2328588, overlap 2328582 2328588 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAGC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 3057 2328611 - 2328587 - G 78 -10.8 -3.51924 | gap 1, opp_overlap 2328584 2328582 2328588, overlap 2328588 GCGGGATTGAGATAA GCCGCCTTTGG TAGC CCAAAGGCG-C TGATGTTTAATAGCA TERM 3058 2328611 - 2328588 - G 70 -11 -2.7094 | opp_overlap 2328584 2328582 2328588, overlap 2328587 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA TERM 3059 2328588 - 2328611 + g 71 -11 -2.87501 | opp_overlap 2328587 2328588, overlap 2328584 2328582 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA folE 2329366 - 2328698 - | GTP cyclohydrolase I TERM 3060 2329912 - 2329925 + G 70 -3.7 -4.70583 | ATGGCTACGATTTAG GCCAG GGCG CAGGC TTTTATCTTAATGCC fghA1 2329623 - 2330459 + | S-formylglutathione hydrolase TERM 3061 2330466 - 2330481 + T 79 -11.8 -2.56271 | opp_overlap 2330462 2330463, overlap 2330465 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA cirA 2332416 - 2330491 - | colicin I receptor TERM 3062 2330671 - 2330685 + g 78 -9.2 -3.87373 | CGGTGTTTTAGCCGT CGCGCT GTC GGCGCG TTTCTGCCCGGTATA TERM 3063 2330852 - 2330873 + g 72 -5.9 -4.30448 | overlap 2330865 TAGTTGATCGACAGT TTCCATTCA TCGT TGAACGGAA TTTTCAGTTCGGTTT TERM 3064 2332752 - 2332733 - R 100 -13.6 -4.75776 | AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA lysP 2334243 - 2332774 - | lysine-specific permease TERM 3065 2333111 - 2333099 - G 72 -6.2 -4.40358 | AGCCAGGCGATAAAA CCGG TCATC CCGG AGGTGTTCAGCAGCC TERM 3066 2333671 - 2333636 - G 70 -6.8 -4.08945 | gap 1, opp_overlap 2333646 2333647, overlap 2333647 ATCATCGCCGCAAAA CCACCAG-CAAACGGCG CTT CGCCGATTGTCCAGTTG CTCCAGCCCGCAGGC TERM 3067 2333659 - 2333647 - G 84 -10.5 -3.83705 | opp_overlap 2333646 2333647, overlap 2333636 AAAACCACCAGCAAA CGGCG CTT CGCCG ATTGTCCAGTTGCTC EcSMS35_2304 2335329 - 2334448 - | LysR family transcriptional regulator TERM 3068 2336125 - 2336099 - g 75 -6.6 -4.42386 | CCCGGATGCAGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 3069 2336397 - 2336379 - g 71 -2.2 -5.00884 | AGCGCGCTGAAAAAA GCCGGGGC GAA ACCTCTGC TGATGGCTCTGGTAC EcSMS35_2305 2335428 - 2336477 + | hypothetical protein nfo 2336551 - 2337408 + | endonuclease 4 TERM 3070 2337812 - 2337796 - g 82 -9.3 -4.15044 | opp_overlap 2337794 2337801 TGCTCCTGGAAGAAA CGCGCCG CGC CGGCGTG AATGTCTCCGGCTGC EcSMS35_2307 2337411 - 2338499 + | PfkB family kinase EcSMS35_2308 2339805 - 2338555 - | NupC family nucleoside transporter TERM 3071 2339009 - 2338989 - G 70 -9.8 -3.23899 | overlap 2338984 CGTTAATTAACGCAA TGATGGCA ACAAA TGCCATCA CCACTGTTGCCACAC TERM 3072 2339179 - 2339164 - G 78 -9 -3.9122 | overlap 2339151 CAGGCGGGCAAACAA GATCCC GCCT GGGATC GCCATTAACGATGCC TERM 3073 2339860 - 2339891 + r 80 -10 -3.79678 | opp_overlap 2339859 2339858 TGCCCATCAGAAATC GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT EcSMS35_2309 2340846 - 2339905 - | inosine-uridine preferring nucleoside hydrolase family protein TERM 3074 2339959 - 2339982 + g 90 -11.8 -3.92324 | opp_overlap 2339959 2339956 TAATCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTGGTATTGGCGGG TERM 3075 2341053 - 2341079 + G 71 -2.1 -5.02074 | opp_overlap 2341053, overlap 2341058 TTGCTTTTCAACGGA TGTTTCAGCCG ATGCA CGGCTGTTTCA TTTTTTAGCACGTGA TERM 3076 2341058 - 2341074 + G 86 -9.4 -4.42765 | opp_overlap 2341053, overlap 2341053 TTTCAACGGATGTTT CAGCCG ATGCA CGGCTG TTTCATTTTTTAGCA TERM 3077 2341117 - 2341131 + G 76 -7.8 -4.18018 | GTGCAGGAAGGGCAA CAGCCG TCA TGGCTG TTTTACCTGACGCGA TERM 3078 2341137 - 2341158 + G 73 -11.5 -2.72043 | overlap 2341136 GTCATGGCTGTTTTA CCTGACGCG AGGC CGCGCCAGG CTTTACGCCACGCTT nsr 2340976 - 2341674 + | regulatory protein Nsr EcSMS35_2311 2342992 - 2341742 - | NupC family nucleoside transporter TERM 3079 2342203 - 2342220 + g 70 -6.9 -4.08216 | ATACCATTACCACCG TCGCCAC ACCA GCGGCGA TTTTCAGCCCGGTCA TERM 3080 2342364 - 2342353 - G 81 -5.8 -4.87803 | overlap 2342354 TACGTGCAAACAAAA TCCC GCCA GGGA TCGCCATCAGCGATG TERM 3081 2342482 - 2342528 + g 83 -10.2 -4.07568 | overlap 2342485 CGGTAAACAACTCGT TGCGATTCATGCGATCGATAAA CGG TTTAACGATCGCCGGGATCTCA TTTTGCCCGAGGAAA TERM 3082 2342485 - 2342525 + g 72 -10.5 -3.08032 | overlap 2342482 TAAACAACTCGTTGC GATTCATGCGATCGATAAA CGG TTTAACGATCGCCGGGATC TCATTTTGCCCGAGG TERM 3083 2342980 - 2342997 + g 70 -5.7 -4.30014 | TCCCCACAACACTTC TCATTAT ATCC ATAATGA TTTTCCCTTCATGCC TERM 3084 2343019 - 2343036 + r 84 -8.3 -4.41353 | opp_overlap 2343019 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTATGA TERM 3085 2343036 - 2343019 - R 80 -10.5 -3.74693 | opp_overlap 2343019 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTATGA EcSMS35_2312 2344024 - 2343086 - | indigoidine synthase A like protein TERM 3086 2343125 - 2343137 + g 73 -9.1 -3.61517 | opp_overlap 2343133 TTTGGCAATTTCGCT CGCCA GAA TGGCG TTGTTGAACACCAGT TERM 3087 2343691 - 2343701 + g 74 -3.2 -5.00616 | TCGTTGAAGCCACAG TGGT TGC GCCA TTTTTTCCGGCGGCA EcSMS35_2313 2344953 - 2344012 - | kinase, pfkB family protein TERM 3088 2345219 - 2345200 - R 100 -9.3 -5.28683 | AGGAACACTAAAAAA GGGCAGA AATTAA TCTGCCC TTGAGGAAATAACCT TERM 3089 2345331 - 2345371 + r 78 -6.1 -4.66318 | opp_overlap 2345335, overlap 2345332 2345333 TCCCTTTGCGCTCAT CAAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACACC TTTTATTACGCTGCT TERM 3090 2345332 - 2345370 + r 74 -9.6 -3.39068 | opp_overlap 2345335, overlap 2345331 2345333 CCCTTTGCGCTCATC AAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACAC CTTTTATTACGCTGC TERM 3091 2345333 - 2345369 + r 84 -13.1 -2.62958 | opp_overlap 2345335, overlap 2345332 2345331 CCTTTGCGCTCATCA AATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACA CCTTTTATTACGCTG TERM 3092 2345367 - 2345335 - R 100 -17.9 -3.72576 | opp_overlap 2345333 2345332 2345331 TTTGCGCTCATCAAA TGTTACAGGGCAGGA AAT TTCTGCCCTGTAACA CACCTTTTATTACGC fruA 2347068 - 2345377 - | PTS system, fructose-specific, IIBC component fruK 2348023 - 2347085 - | 1-phosphofructokinase fruB 2349153 - 2348023 - | PTS system fructose-specific phosphotransferase enzyme IIA component TERM 3093 2349168 - 2349188 + H 77 -10.5 -3.48276 | TAGTTCTCCTCTCTT GCTGAATTG AAA CGATTCAGC TTCTATGAGAAAAAA TERM 3094 2349241 - 2349205 - H 89 -2.9 -5.67063 | overlap 2349206 2349207 TCTATGAGAAAAAAA GCGCCAACCTGGCTT AGGGTTA AAGACAAGATCGCGC TGAAACGTTTCAAGA EcSMS35_2317 2349319 - 2349450 + | hypothetical protein TERM 3095 2350491 - 2350502 + G 72 -4.4 -4.66535 | TTGGCATTCTGGGCG GCAT CGGG ATGC TTTATTTTCAGGATT setB 2349521 - 2350702 + | sugar efflux transporter B EcSMS35_2318 2350953 - 2350699 - | hypothetical protein TERM 3096 2350932 - 2350913 - G 72 -10 -3.27525 | gap 1, overlap 2350908 2350927 GGGCTGGAAATTGAA GGGGCAGTG CAA CAC-GCCCC GCAACCCGGACGGCA EcSMS35_2320 2351108 - 2351680 + | elongation factor P family protein TERM 3097 2351701 - 2351720 + F 100 -10 -5.46129 | opp_overlap 2351701 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA TERM 3098 2351720 - 2351701 - f 79 -7.8 -4.42386 | opp_overlap 2351701 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA EcSMS35_2321 2351903 - 2353369 + | mannitol dehydrogenase family protein TERM 3099 2353380 - 2353418 + F 74 -8.1 -4.03183 | opp_overlap 2353387 TTTAACGATTTCTGC GGTTAAAGCGGATGAAG CTCGC CTTCGTCCGCTCTCCCC TTCTCTTTTCTGCCT TERM 3100 2353411 - 2353387 - f 77 -10 -3.53091 | opp_overlap 2353380 ATTTCTGCGGTTAAA GCGGATGAAG CTCGC CTTCGTCCGC TCTCCCCTTCTCTTT EcSMS35_2322 2353487 - 2354473 + | CobW/P47K family protein TERM 3101 2354533 - 2354523 - g 73 -4 -4.81734 | opp_overlap 2354523 AAATATGATTAAAAA TTTG CCG CAAA TAGTGTTGTTGAATA TERM 3102 2354773 - 2354763 - g 75 -4.6 -4.86731 | CTGGCTGAAAGAAAA CGCC CCT GGCA GACGACGTATCGTGA EcSMS35_2323 2354512 - 2355225 + | PAP2 family protein TERM 3103 2355574 - 2355585 + F 86 -2.2 -5.61596 | AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT EcSMS35_2324 2355637 - 2356203 + | NlpC/P60 family protein TERM 3104 2356253 - 2356270 + F 100 -11.3 -5.85244 | opp_overlap 2356253 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3105 2356270 - 2356253 - f 91 -11.3 -3.77219 | opp_overlap 2356253 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3106 2356876 - 2356857 - g 70 -4.9 -4.56597 | overlap 2356859 CCCTTTGCTGAAAAA TAGCGGC GTCTTT GCCGCTC TGAATCTCAACCTGA TERM 3107 2356874 - 2356859 - g 72 -7.5 -3.90048 | overlap 2356857 CTTTGCTGAAAAATA GCGGC GTCTTT GCCGC TCTGAATCTCAACCT TERM 3108 2357088 - 2357100 + G 73 -4.1 -4.7497 | CTGGACATGGAACGA TGTGT GGT ACGCA TTTTTACTGGGTGGC TERM 3109 2357666 - 2357684 + G 71 -9.6 -3.50447 | overlap 2357654 2357678 GCGCGCTTATCTATC TTGAGCGT TTT ACGCTCGA TTATCTGAAAATTGA EcSMS35_2325 2356384 - 2357940 + | putative cyclic diguanylate phosphodiesterase TERM 3110 2358105 - 2358132 + G 77 -8.5 -4.06055 | gap 1 GGAAAGCTATGCCTT TGCCGTACTGGG CGAAC CCCGGTACG-CA TTTAATTTCAACCAT TERM 3111 2358917 - 2358898 - g 79 -2.2 -5.25803 | gap 1, overlap 2358900 2358902 AATTTCGATAAAAAA TACATCATC AAA GATGA-GCA AAAGAACGAATCAGC EcSMS35_2326 2358022 - 2359836 + | ABC transporter, periplasmic solute-binding protein TERM 3112 2360682 - 2360727 + G 80 -5.3 -5.02074 | overlap 2360695 TGTGTTCCGCAACGC CATGCTGCTGGTGATTGCCGG TTTT CCGGCGACGTTTATCAGCATG TTTTTTACCGGCTCG EcSMS35_2327 2359837 - 2360931 + | ABC transporter, permease protein EcSMS35_2328 2360931 - 2361956 + | ABC transporter, permease protein EcSMS35_2329 2361958 - 2363547 + | ABC transporter, ATP-binding protein EcSMS35_2330 2363895 - 2363551 - | hypothetical protein TERM 3113 2364213 - 2364196 - R 76 -7.7 -4.26202 | opp_overlap 2364196 ACATGCATCAACAAA GGAAGCC TTTT AGCTTCC TCGTTGTGCAATAGA bcr 2365419 - 2364229 - | bicyclomycin resistance protein rsuA 2366142 - 2365447 - | ribosomal small subunit pseudouridine synthase A EcSMS35_2333 2366292 - 2368052 + | putative helicase rplY 2368177 - 2368461 + | ribosomal L25p family protein TERM 3114 2368477 - 2368506 + T 100 -15.9 -2.90219 | opp_overlap 2368484, overlap 2368484 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCG GCGGGGTTTTTTG TCTCTGCAAATTATG TERM 3115 2368499 - 2368484 - T 100 -11.8 -5.06103 | opp_overlap 2368477 2368484 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA TERM 3116 2368484 - 2368499 + T 100 -11.8 -5.4251 | opp_overlap 2368484, overlap 2368477 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA ndpA 2369607 - 2368600 - | nucleoid-associated protein NdpA EcSMS35_2336 2369768 - 2369652 - | hypothetical protein TERM 3117 2369749 - 2369738 - G 100 -5.8 -6.04378 | opp_overlap 2369738 2369748 AAAGCAGAAAAAAAA CCGT TGCT ACGG TAATATGTTGCCCTT EcSMS35_2337 2369789 - 2370016 + | hypothetical protein TERM 3118 2370434 - 2370468 + G 81 -6.5 -4.78572 | gap 1, overlap 2370437 AAATGAGATGGCGCG CGACTGGCA-GCTGAT GTTC ATCAGCGTGCCGGTTA TTTTATTGCTTGAAC TERM 3119 2370437 - 2370465 + G 93 -10.4 -4.48997 | gap 1, overlap 2370434 TGAGATGGCGCGCGA CTGGCA-GCTGAT GTTC ATCAGCGTGCCGG TTATTTTATTGCTTG TERM 3120 2370873 - 2370886 + G 76 -8.1 -4.25104 | opp_overlap 2370866 2370871, overlap 2370885 TTCGAGAAGCAGATG CCTGC GCTG GCAGG TTTTGCTGAGCAAAA EcSMS35_2338 2370036 - 2371796 + | sulfatase family protein TERM 3121 2371981 - 2371965 - f 100 -8.7 -5.4756 | opp_overlap 2371957 2371965 AATCCCAAGAAAAAA CCAACCA TTA CGGTTGG TTTTTTTATATCTGC TERM 3122 2371965 - 2371981 + F 100 -8 -5.76633 | opp_overlap 2371965, overlap 2371957 AATCCCAAGAAAAAA CCAACC ATTAC GGTTGG TTTTTTTATATCTGC TERM 3123 2372008 - 2372039 + F 89 -8.8 -4.73682 | opp_overlap 2372012, overlap 2372012 CTGCAATTAATTCGA TAAACAGACCGTGA CACA TCACAGCCTGTTTA TTTTCTGTTATCAGA TERM 3124 2372012 - 2372035 + F 77 -5.2 -4.89519 | opp_overlap 2372012, overlap 2372008 AATTAATTCGATAAA CAGACCGTGA CACA TCACAGCCTG TTTATTTTCTGTTAT TERM 3125 2372035 - 2372012 - f 81 -9.6 -3.93638 | opp_overlap 2372008 2372012 AATTAATTCGATAAA CAGACCGTGA CACA TCACAGCCTG TTTATTTTCTGTTAT TERM 3126 2372789 - 2372816 + F 72 -9.8 -3.23853 | overlap 2372787 TGCTCAAAGCCAGCT CCCGCATCAGTG GTCA CGTTGTTGCGGG TGTTAATTGCCGAAC narP 2374961 - 2375608 + | nitrate/nitrite response regulator NarP TERM 3127 2375612 - 2375639 + T 91 -6.3 -5.35815 | gap 1, opp_overlap 2375612 2375614, overlap 2375613 2375614 GGGGCACAATAAAAA TA-GCCCGATGG CATCA CCATCGGGCCTC TTTTTATTTACTCTC TERM 3128 2375638 - 2375612 - T 100 -10.8 -5.18726 | opp_overlap 2375612 2375613 2375614, overlap 2375614 GGGGCACAATAAAAA TAGCCCGATGGC ATC ACCATCGGGCCT CTTTTTATTTACTCT TERM 3129 2375613 - 2375637 + T 93 -11.4 -4.29436 | opp_overlap 2375612 2375614, overlap 2375612 2375614 GGGCACAATAAAAAT AGCCCGATGG CATCA CCATCGGGCC TCTTTTTATTTACTC TERM 3130 2375636 - 2375614 - T 100 -15.6 -4.22377 | opp_overlap 2375613 2375612 2375614, overlap 2375612 GGCACAATAAAAATA GCCCGATGGC ATC ACCATCGGGC CTCTTTTTATTTACT TERM 3131 2375614 - 2375636 + T 95 -14.9 -3.16035 | opp_overlap 2375614 2375612, overlap 2375613 2375612 GGCACAATAAAAATA GCCCGATGG CATCA CCATCGGGC CTCTTTTTATTTACT EcSMS35_2342 2376695 - 2375643 - | cytochrome c-type biogenesis family protein TERM 3132 2376702 - 2376690 - G 77 -3.3 -5.07486 | CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT dsbE 2377249 - 2376692 - | thiol:disulfide interchange protein DsbE ccmF 2379189 - 2377246 - | cytochrome c-type biogenesis protein CcmF ccmE 2379665 - 2379186 - | cytochrome c-type biogenesis protein CcmE ccmD 2379871 - 2379662 - | heme exporter protein D TERM 3133 2379829 - 2379818 - G 95 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2380605 - 2379868 - | heme exporter protein C TERM 3134 2380025 - 2379990 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2379990 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2381309 - 2380647 - | heme exporter protein CcmB TERM 3135 2380778 - 2380762 - G 81 -10.8 -3.57797 | GGCAAATGCATAGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG ccmA 2381923 - 2381306 - | heme ABC exporter, ATP-binding protein CcmA napC 2382544 - 2381942 - | cytochrome c-type protein napC TERM 3136 2382368 - 2382394 + g 81 -6.6 -4.66163 | ACGCATTTCGTGGCA GCTAATGCAGAA CTC TTCGGTATTGGC TTTTTCCATCCCGGT napB 2383003 - 2382554 - | periplasmic nitrate reductase, diheme cytochrome c subunit TERM 3137 2382668 - 2382645 - G 70 -5.9 -4.18674 | overlap 2382646 TGCAGACAGAAATAA CGACGCGGA GCCACT TCCGCGCCC ACTTTGCCGTCGCTG napH 2383863 - 2383000 - | periplasmic nitrate reductase, NapH TERM 3138 2383336 - 2383312 - G 86 -3.5 -5.35815 | overlap 2383326 TAGATCAAATAAAAA CAGCGCG AGAATAAGCAG CGCGCCG CTACCGAAGCCCATT napG 2384545 - 2383850 - | periplasmic nitrate reductase, NapG TERM 3139 2384299 - 2384274 - G 70 -3.9 -4.63218 | overlap 2384276 2384277 TCCCGCGCAACAAAA TATGGCGTGCC CGCC GACAGGCCAGA AGCCAGCGTCGCCAG napA 2387038 - 2384552 - | periplasmic nitrate reductase, large subunit TERM 3140 2385999 - 2386017 + g 79 -3.7 -5.02476 | overlap 2385994 2386000 AACTGGTCTTTCGGC ACGCCGG TCATT TCGGCGG TTTTTTCCAGCGTAT napD 2387298 - 2387035 - | NapD protein napF 2387782 - 2387288 - | ferredoxin-type protein NapF TERM 3141 2387925 - 2387915 - g 70 -6.8 -4.08767 | CCGATCGGGGTAAAA CCTG TAG CAGG ATCAAAAGAGTGGCG TERM 3142 2388014 - 2388032 + G 73 -3.9 -4.80453 | gap 1 ATAGCGATTAATTCG CCAG-AGA TATT TCTGCTGG TTTGTTTTCTCATCA EcSMS35_2357 2387891 - 2388055 + | hypothetical protein eco 2388190 - 2388678 + | ecotin TERM 3143 2388788 - 2388824 + T 93 -15.2 -2.71011 | opp_overlap 2388790 2388809 CGCGTCTTATTAGCA TACGCCACATCCGGCA AACCA TGCCGGATGTGGCACA TCATTACAACGCAAT TERM 3144 2388822 - 2388790 - T 100 -20 -2.82516 | opp_overlap 2388788, overlap 2388809 CGTCTTATTAGCATA CGCCACATCCGGCA AACCA TGCCGGATGTGGCA CATCATTACAACGCA mqo 2390474 - 2388828 - | malate dehydrogenase (acceptor) TERM 3145 2389882 - 2389892 + g 72 -6.8 -4.19624 | CCAATTTCCGTACGC GTGG CTG CCAC TTTCTGTTGCGGATC TERM 3146 2390106 - 2390076 - G 78 -9.6 -3.92641 | overlap 2390077 2390080 AACGGTATTGATAAA TGAACGCGGTGTAC GCA GCACGCCGCGCTCG ACCTGGTGCGCCCAG TERM 3147 2390105 - 2390077 - G 82 -13.1 -2.95102 | overlap 2390076 2390080 ACGGTATTGATAAAT GAACGCGGTGTAC GCA GCACGCCGCGCTC GACCTGGTGCGCCCA TERM 3148 2390102 - 2390080 - G 81 -11.2 -3.61988 | overlap 2390077 2390076 GTATTGATAAATGAA CGCGGTGTAC GCA GCACGCCGCG CTCGACCTGGTGCGC TERM 3149 2390681 - 2390651 - R 82 -12.6 -2.79183 | opp_overlap 2390642 2390640 GGGATTTTTAGCATA TTGACCTGGCGG CAGCAGT CCGCCAGGTCAG CGTCGAAATATTATG EcSMS35_2360 2392335 - 2390692 - | ABC transporter ATP-binding protein TERM 3150 2390957 - 2390967 + g 79 -2.4 -5.28826 | opp_overlap 2390930 2390956 2390958, overlap 2390948 GCCAGCGCCAGCAAC AGCG CGA CGCG TTTTTTCTGCCCTTT alkB 2393061 - 2392411 - | alkylated DNA repair protein AlkB ada 2394125 - 2393061 - | regulatory protein Ada apbE 2395254 - 2394199 - | thiamine biosynthesis lipoprotein ApbE TERM 3151 2395351 - 2395324 - R 83 -12.8 -3.10622 | opp_overlap 2395331, overlap 2395331 TACGCTGAAAACAAT GAAAAAAGGGCC CGCA GGCCCTTTGTTC GATATAAATCGAGAT TERM 3152 2395331 - 2395344 + r 84 -9.5 -4.23213 | opp_overlap 2395324 2395331 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATAAA TERM 3153 2395344 - 2395331 - R 100 -9.5 -5.43514 | opp_overlap 2395331, overlap 2395324 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATAAA ompC 2396460 - 2395366 - | outer membrane protein C TERM 3154 2396861 - 2396879 + H 100 -14.6 -5.81032 | TTACCCCTATTTCAA CCGGATGC CTC GCATCCGG TTTTTTTTACCCTTC TERM 3155 2398566 - 2398540 - g 70 -5 -4.56978 | opp_overlap 2398548 CTGGTAAACAAGAAA CTCAAGCAGGCG CAG CGTCTGTATGAG AAAAACCAGCAGGGG yojN 2397199 - 2399871 + | sensor histidine kinase YojN rcsB 2399888 - 2400538 + | capsular synthesis regulator component B TERM 3156 2400548 - 2400581 + T 100 -14.7 -3.61178 | opp_overlap 2400558, overlap 2400549 2400560 2400561 GACTAATCACCTGTA GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA TTTGCACTGAATGCC TERM 3157 2400549 - 2400580 + T 100 -18.2 -2.76492 | opp_overlap 2400558, overlap 2400548 2400560 2400561 ACTAATCACCTGTAG GCCAGATAAGACGC GTTA GTGTCTTATCTGGC ATTTGCACTGAATGC TERM 3158 2400561 - 2400613 + T 79 -12.1 -2.62463 | opp_overlap 2400558, overlap 2400549 2400548 2400560 TAGGCCAGATAAGAC GCGTTAGTGTCTTATCTGGCATTTG CAC TGAATGCCAGATGCGGCGTAAACGC CTTATCCGTCCTACG rcsC 2403473 - 2400624 - | sensor histidine kinase/response regulator RcsC TERM 3159 2403091 - 2403070 - G 75 -4.5 -4.8543 | gap 1, overlap 2403074 TAAGCCGCAGAAAAA TTATCGCGCC AGT AGCGC-ATAA ACCACGCCAATGACT TERM 3160 2404808 - 2404766 - g 86 -9 -4.41348 | overlap 2404770 CTGCCCGCAAAGAAA CCCAGCGCCGCATGGCGC AAGCAGA ACGCCTCGCCACACTGGG TGAGCTGATGGCTGG TERM 3161 2405302 - 2405292 - g 91 -5.4 -5.40072 | opp_overlap 2405292 CTCGCTGCAAAAAAA GATC TTC GATC CCTTTTTCACCACCA atoS 2403640 - 2405466 + | sensory box histidine kinase AtoS atoC 2405463 - 2406848 + | sigma-54 dependent response regulator AtoC TERM 3162 2406857 - 2406903 + F 72 -10.2 -2.90904 | opp_overlap 2406857 2406858, overlap 2406873 TGTATAACGCCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCGC TCATTCTCCTTATAA TERM 3163 2406902 - 2406857 - f 100 -13.5 -4.21936 | gap 1, opp_overlap 2406857 2406873, overlap 2406858 TGTATAACGCCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCC-G CTCATTCTCCTTATA TERM 3164 2406902 - 2406858 - f 87 -13.7 -3.1268 | opp_overlap 2406857 2406873, overlap 2406857 GTATAACGCCAAAAC TTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCG CTCATTCTCCTTATA pcaI 2407044 - 2407706 + | 3-oxoadipate CoA-transferase, subunit A EcSMS35_2371 2407706 - 2408356 + | 3-oxoacid CoA-transferase, B subunit TERM 3165 2408369 - 2408384 + G 75 -6.8 -4.3739 | TGATTGGTCGCATAT CGCGTT TTAT GACGCG TTTTGTCAGCCGGTG TERM 3166 2408646 - 2408628 - g 82 -11.7 -3.53012 | opp_overlap 2408623 2408621 CGCCTCCGCCGCAAA GACGCCC GTACA GGGCGTC ATGCTGGTTACTTTC TERM 3167 2408857 - 2408845 - g 72 -10.5 -3.01712 | CTGTTGGCTGCAACA CCGGG CAA CCCGG TTGAGCATATCGCCG EcSMS35_2372 2408353 - 2409675 + | putative short chain fatty acid transporter atoB 2409706 - 2410890 + | acetyl-CoA acetyltransferase TERM 3168 2410934 - 2410892 - T 70 -10.1 -2.60571 | gap 1, opp_overlap 2410901 2410903, overlap 2410879 2410901 AACGGTTGAATTAAC CAATAAAAACACCCGATAGC GAAA GTTATCGGGCGTTTTC-TTG AACATCGACGGCGAA TERM 3169 2410926 - 2410901 - T 100 -9.7 -5.20534 | opp_overlap 2410901 2410903, overlap 2410892 ATTAACCAATAAAAA CACCCGATAGC GAAA GTTATCGGGCG TTTTCTTGAACATCG TERM 3170 2410901 - 2410926 + T 91 -9.7 -4.64676 | opp_overlap 2410901 2410892, overlap 2410903 ATTAACCAATAAAAA CACCCGATAGC GAAA GTTATCGGGCG TTTTCTTGAACATCG TERM 3171 2410903 - 2410924 + T 74 -10.9 -2.62512 | opp_overlap 2410901 2410892, overlap 2410901 TAACCAATAAAAACA CCCGATAGC GAAA GTTATCGGG CGTTTTCTTGAACAT EcSMS35_2374 2411740 - 2410964 - | hypothetical protein TERM 3172 2411642 - 2411613 - G 70 -3.6 -4.60041 | gap 2 ATCGATTGTGAAAAA CTGGCATCTTCGCC CTCT GCCG--GATGCCAG CCAGAGAGCGGTGCA EcSMS35_2375 2413394 - 2411745 - | hypothetical protein TERM 3173 2411983 - 2411998 + g 95 -6 -5.40072 | opp_overlap 2411983, overlap 2411984 TCGCCTTGCAATATA CGCCGC CACT GCGGCA TTTTTTTCGCCAGCC TERM 3174 2411984 - 2411997 + g 76 -9.5 -3.83561 | opp_overlap 2411983, overlap 2411983 CGCCTTGCAATATAC GCCGC CACT GCGGC ATTTTTTTCGCCAGC TERM 3175 2412353 - 2412340 - G 74 -3.1 -5.00616 | gap 1, opp_overlap 2412349 TTTTGCTGTAAAAAA GT-GCG TAT CGCCAC GGTCATGGCTTTCGC EcSMS35_2376 2417909 - 2413395 - | alpha-2-macroglobulin family protein TERM 3176 2414503 - 2414524 + g 70 -10.9 -2.79679 | GGCATGTTATCTGCC TGCTCGGCA TAAC TGTCGAGCA TATGCTGCCAGTATT TERM 3177 2417018 - 2417001 - G 71 -2.7 -4.83169 | ACTTTCGTAGAAAAA GTTCTCG GAGA CAAAAAC GCCGCCTTCAGCATC TERM 3178 2417031 - 2417018 - G 71 -2.3 -4.96848 | overlap 2417019 TCTCGGAGACAAAAA CGCCG CCTT CAGCA TCCTTACCCAGAATG TERM 3179 2417353 - 2417369 + g 70 -6.5 -4.15106 | GGCGAGATGAAATTG CTGGATG CGC CTTCCAG TTTTACCCCTTGCTG EcSMS35_2377 2418556 - 2417933 - | hypothetical protein TERM 3180 2418150 - 2418164 + g 91 -11.4 -4.08706 | opp_overlap 2418143 AAAAAAATCATATCG CCAGGC AGC GCCTGG TTTATGTCCTGGCCA EcSMS35_2378 2420241 - 2418553 - | hypothetical protein TERM 3181 2419466 - 2419481 + g 79 -4.6 -5.00616 | GCGCTGACCACGATG CGCTGG CGTA CTGGCG TTTTTTCAGCAGCAC TERM 3182 2419512 - 2419527 + g 81 -4.6 -5.03314 | opp_overlap 2419513, overlap 2419513 GCTCTTCCAGGCCAA AGCTGG CTTG CCAGCG TTTTTTACCGCTCAA TERM 3183 2420338 - 2420317 - R 87 -8.7 -4.55023 | opp_overlap 2420317, overlap 2420312 CCTAATACGACAAAA GCCCAGACT TTGC AGCCTGGAC TTTTCAATTCAAACA TERM 3184 2420368 - 2420355 - R 74 -8.1 -4.0098 | opp_overlap 2420355 TTTCAATTCAAACAA GGGAG ATAT CTCCC TTTTGGCATGAAGAC TERM 3185 2420355 - 2420368 + r 74 -8.1 -4.13767 | opp_overlap 2420355 TTTCAATTCAAACAA GGGAG ATAT CTCCC TTTTGGCATGAAGAC gyrA 2423017 - 2420390 - | DNA gyrase, A subunit TERM 3186 2422145 - 2422165 + g 82 -2.4 -5.45802 | overlap 2422137 AGACTCGTCACGCAG CGCGCTGA TACCT TCCACGCG TTTTTCTTTTACCAG TERM 3187 2422192 - 2422227 + g 72 -8.4 -3.73224 | gap 1 CCAGTTCCGCAATTT TTTCG-ATCAGGCGAGC TTT GTTCACCTGATACGGAA TTTCGTGGACGATAA TERM 3188 2423331 - 2423345 + r 70 -7.1 -3.91897 | opp_overlap 2423331 2423322 CAAGCAGCGTTCAAA TCCGC TCCAT GCGGA TTTGTCGCTCACCCC TERM 3189 2423415 - 2423394 - R 83 -11.7 -3.14132 | GCTCCTGGGGATTAA TGAGAGACA TCCA TGTCTCTCA CCGAAGGCCAGCCTG TERM 3190 2423439 - 2423421 - R 73 -10.2 -3.05463 | opp_overlap 2423419 2423430 ATGTCTCTCACCGAA GGCCAGCC TGC GGCTGGGC AAATTCGTTCCTGAC EcSMS35_2380 2424719 - 2423517 - | mandelate racemase/muconate lactonizing enzyme family protein EcSMS35_2381 2426060 - 2424732 - | major facilitator transporter TERM 3191 2425486 - 2425476 - G 71 -2.4 -4.93877 | TGGCAGTAAATAAAA GGTC AGC GCCC CCAATAACACCGTAG TERM 3192 2426047 - 2426059 + g 74 -3.4 -4.91429 | TCATACAAATCTTTC TGAG GACTG CTCA TTTTGTTTCACCTTT TERM 3193 2426534 - 2426544 + G 77 -3.2 -5.08824 | opp_overlap 2426524 TATCATTCCACGCAG CGGA ACA TTCG TTTTTTCCGTAACAG EcSMS35_2382 2426298 - 2426996 + | GntR family transcriptional regulator ubiG 2427074 - 2427796 + | 3-demethylubiquinone-9 3-O-methyltransferase TERM 3194 2427864 - 2427832 - T 81 -12 -3.08464 | opp_overlap 2427839 2427841 2427852 CGACGACCGAGCCAA GCCTGATGCGACGC TTGCC GCGTCTTATCAGGC CTACAAATGCTCCCG TERM 3195 2427852 - 2427895 + T 100 -13.3 -3.53811 | opp_overlap 2427832 2427892, overlap 2427841 ATGCGACGCTTGCCG CGTCTTATCAGGCCTAC AAATGCTCCC GTAGGCCAGATAAGGCG TTTACGCCGCATCCG EcSMS35_2384 2431699 - 2427935 - | outer membrane autotransporter TERM 3196 2427975 - 2427962 - G 73 -3.7 -4.87665 | overlap 2427963 2427964 TGTCATCGACAAAAA CCCTG CCGT CTGGG CAAAATCATCACTCC TERM 3197 2430579 - 2430563 - G 74 -8.7 -3.86916 | overlap 2430558 GACCATCAGACCAAA GCAATCC TGC GGATCGC TCTGACAGTGCGTGT TERM 3198 2430757 - 2430780 + g 72 -6 -4.36914 | overlap 2430750 2430758 CAATCGCGCCATCGT TGCTGGTATT GCCT ATTACCAGCG TTTTATCGGCGGCAA TERM 3199 2431403 - 2431416 + g 76 -8.1 -4.28487 | opp_overlap 2431403, overlap 2431398 CGAGTTATTAGCAAA CAGGG TCAT CCCTG TTTCATTTTGTGGTG nrdA 2432395 - 2434680 + | ribonucleoside-diphosphate reductase, alpha subunit nrdB 2434775 - 2435956 + | ribonucleoside-diphosphate reductase, beta subunit EcSMS35_2387 2435956 - 2436210 + | 2Fe-2S iron-sulfur cluster-binding protein EcSMS35_2388 2436914 - 2436264 - | putative lipopolysaccharide kinase InaA EcSMS35_2389 2438185 - 2436995 - | major facilitator transporter TERM 3200 2437813 - 2437779 - G 90 -4.8 -5.4251 | GCCAGAGAGAAAAAA CTGATGCCCTCCCCAC GTC GGGAGGCCGGGATCAG CCGCGCGGAAATCGT EcSMS35_2390 2438337 - 2439236 + | LysR family transcriptional regulator TERM 3201 2439247 - 2439222 - T 93 -15.5 -2.86743 | overlap 2439224 AAATTTGATATGAGA CAGGATGGCGC ATGA ACGCCATCCTG CAGTAGCATTACTCT TERM 3202 2439245 - 2439224 - T 82 -12.3 -2.97925 | overlap 2439222 ATTTGATATGAGACA GGATGGCGC ATGA ACGCCATCC TGCAGTAGCATTACT glpQ 2440332 - 2439256 - | glycerophosphoryl diester phosphodiesterase GlpQ glpT 2441695 - 2440337 - | glycerol-3-phosphate transporter TERM 3203 2440542 - 2440558 + g 79 -3.5 -5.08824 | opp_overlap 2440526 AGCCCGGTAAAACCC GCTGCCG TAC CTGCCGC TTTTTTCGGTGCCAG TERM 3204 2441431 - 2441416 - G 70 -6 -4.25104 | CTGCGGGCAGGAAAA CGCGCG GATT CGAGCG ATCCGATACCGAACC glpA 2441967 - 2443595 + | anaerobic glycerol-3-phosphate dehydrogenase subunit, A TERM 3205 2443669 - 2443654 - g 72 -4.6 -4.66833 | CTGCAACTGCAAAAA CACGGC CTGC GCTGTG CCATTGTCACTCGTG TERM 3206 2444607 - 2444597 - g 74 -8.2 -3.86897 | TTGATGTGCTACAAA CCGC CAC GCGG GGTGAATGGTATAAG glpB 2443585 - 2444844 + | anaerobic glycerol-3-phosphate dehydrogenase, subunit B glpC 2444841 - 2446031 + | sn-glycerol-3-phosphate dehydrogenase (anaerobic), K-small subunit TERM 3207 2446044 - 2446071 + F 100 -14.2 -4.56597 | TAAACTCCCTTCTGA TGCCCGGTAAGC ATGT GGTTACCGGGCA TTTTTGCGCACACGA EcSMS35_2396 2446056 - 2446181 + | hypothetical protein TERM 3208 2446279 - 2446300 + G 93 -10.9 -4.38712 | gap 1 TTAAAACCTTTATGT TCTCGC-CCG ATA CGGCGCGAGA TTTTCTGGAAATACA EcSMS35_2397 2446224 - 2447183 + | hypothetical protein EcSMS35_2398 2447196 - 2447381 + | hypothetical protein EcSMS35_2399 2448225 - 2447422 - | HpcH/HpaI aldolase/citrate lyase family protein EcSMS35_2400 2449532 - 2448243 - | major facilitator transporter TERM 3209 2449374 - 2449358 - G 77 -3 -5.03227 | gap 1 ATACCACAAAGAAAA TGC-CTG CTCC CAGCGCA TAAGCTTCATTACTC EcSMS35_2401 2450794 - 2449589 - | mandelate racemase/muconate lactonizing enzyme family protein TERM 3210 2450547 - 2450529 - G 78 -5.2 -4.77165 | TTTTCGACAATAAAA CAGCCCAT TTC ACCGGCTG TCGAAACGGCGAATC TERM 3211 2450563 - 2450573 + g 70 -4.6 -4.54821 | TCGAAACGGCGAATC CGGT CTG GCCG TTTTCTGCTTCGACT EcSMS35_2402 2451591 - 2450809 - | IclR family transcriptional regulator TERM 3212 2451808 - 2451792 - R 71 -7.9 -3.72576 | TGCCGGTGCAGTAAA CCGGCAC AGA GTGGCGG AATCAGACAGATAAG EcSMS35_2403 2453013 - 2451811 - | CinA family protein TERM 3213 2452517 - 2452499 - G 87 -4.5 -5.27335 | gap 1, overlap 2452500 TGCGGTAAAGAAAAA CGCTCGCG CAGG CGCG-GCA GGATTTCGTGCTCGA TERM 3214 2453105 - 2453083 - R 100 -14.8 -3.38832 | overlap 2453078 TAGTAAGAAACTGAA TGGCGCGGCA GAA TGCCGCGCCG GAAGGGATCAGAAAC EcSMS35_2404 2453655 - 2453113 - | outer membrane protein, YfaZ EcSMS35_2405 2453996 - 2454358 + | NUDIX family hydrolase TERM 3215 2454386 - 2454365 - T 86 -13.1 -2.93073 | opp_overlap 2454356, overlap 2454362 CTTCTGTAACAATGA TGACAGCCA TTAC TGGCTGTCA GATTGAAAATTTAGT EcSMS35_2406 2454999 - 2454397 - | phosphoglycerate mutase family protein TERM 3216 2454845 - 2454866 + g 85 -7.3 -4.79352 | gap 1, overlap 2454846 ACGACAACCGGGTGC TGCTGTGCCA GTC TGGC-CAGCG TTTTATTGTCGATAC arnB 2455289 - 2456446 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase arnC 2456450 - 2457418 + | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 3217 2457640 - 2457652 + G 77 -3.4 -5.0432 | opp_overlap 2457640 CGCATTGCCCAACTA TCAC CAGAT GTGA TTTTCTCTTTTTATT arnA 2457418 - 2459400 + | UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase EcSMS35_2410 2459397 - 2460287 + | polysaccharide deacetylase domain-containing protein TERM 3218 2461319 - 2461297 - g 81 -4.8 -5.14563 | opp_overlap 2461300 GCTGGCAGCAAAAAA TAATCCTCTG GCG CTGCGGATTA ATGGCTGGATTAACA arnT 2460287 - 2461939 + | undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase EcSMS35_2412 2461936 - 2462271 + | SMR family multidrug efflux pump TERM 3219 2462518 - 2462481 - g 70 -6.3 -4.16101 | opp_overlap 2462485 2462508, overlap 2462470 2462491 AAAACACTACATAAA CTTGCACTAAGCAAAGC CTAT GCCTTGCTCAGTATGAG TTATGTGCTGGTATG TERM 3220 2462546 - 2462569 + G 75 -5.2 -4.65895 | overlap 2462548 ATGGATTGCTTCAAT GGTACTTCCC GGCT GGGAAGGAAC TTTTTCGCTGAAAGC EcSMS35_2414 2462271 - 2462657 + | hypothetical protein pmrD 2462917 - 2462651 - | polymyxin B resistance protein pmrD menE 2464382 - 2463027 - | o-succinylbenzoate-CoA ligase menC 2465341 - 2464379 - | o-succinylbenzoic acid (OSB) synthetase TERM 3221 2464741 - 2464758 + g 70 -6.9 -4.09511 | opp_overlap 2464740 2464743 TTTCACGGGCAAACG CACGCGA ATCA TCGCGGG TTTTGCACGGCTCTT menB 2466198 - 2465341 - | naphthoate synthase TERM 3222 2466243 - 2466220 - R 82 -10.4 -3.91897 | gap 1, opp_overlap 2466233 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATTACGCCAGCGGGA EcSMS35_2418 2466971 - 2466213 - | alpha/beta fold family hydrolase TERM 3223 2466248 - 2466273 + g 74 -9.7 -3.48276 | gap 1, overlap 2466233 CCAGACTTGCGATTA CGC-CAGCGGGA TTT TCCCGATGCGCG TTATGTCCGGCGCGA TERM 3224 2466380 - 2466369 - G 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 3225 2466687 - 2466665 - G 72 -7.6 -3.95051 | CAACAACCCCACAAA GCCCCGCCAG CCC CTGGCAAGCC GCCATCATCGCCACC TERM 3226 2466925 - 2466947 + g 82 -9.2 -4.18494 | opp_overlap 2466923, overlap 2466924 2466928 TGCAAAAACACCAGC CAGGGTAAAC CTG GTTTACCGTG TTTTGCCTGCGCGTG menD 2468638 - 2466968 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 3227 2467998 - 2468008 + g 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CGC GCTG TTTTTCACTTTCCAG menF 2470022 - 2468727 - | isochorismate synthase, menaquinone-specific EcSMS35_2421 2470406 - 2470101 - | hypothetical protein EcSMS35_2422 2470922 - 2470461 - | acetyltransferase TERM 3228 2470858 - 2470842 - G 70 -4.3 -4.44667 | opp_overlap 2470844, overlap 2470844 CTGCTCAACAACAAA CACCGCG CAA CGCAGTT GTAATAAGGCATAAA rnz 2470969 - 2471904 + | ribonuclease Z EcSMS35_2423 2472067 - 2471894 - | hypothetical protein TERM 3229 2471942 - 2471924 - G 93 -8.8 -4.77036 | opp_overlap 2471924 GCTTATTATTAAAAA CAGGGCTA AAC TTGCCCTG TTATCGCAACCCACG TERM 3230 2472632 - 2472603 - R 70 -7.3 -3.91027 | gap 1 TAACCACAGATGAAA TAGCTTGCTATCTT AAA AAGATAGCC-GCTA ATGCAAAAAATACTC TERM 3231 2472732 - 2472705 - R 75 -9.3 -3.57792 | GCACTTACCTGGAAA TCGCTCTCAAT GATAAT ATTAAGAGCGA TCCATCATGGCCGAA TERM 3232 2473316 - 2473358 + r 100 -13.7 -3.73224 | gap 1, opp_overlap 2473320, overlap 2473318 TAACATCATTGTTAA TTA-ATTCGACCAGTCAGCA AATA TGCTGACTGGTCGAACATAG TTTGCTAAAAAGTCA TERM 3233 2473318 - 2473355 + r 93 -15.7 -2.96695 | opp_overlap 2473320, overlap 2473316 ACATCATTGTTAATT AATTCGACCAGTCAGCA AATA TGCTGACTGGTCGAACA TAGTTTGCTAAAAAG TERM 3234 2473353 - 2473320 - R 100 -22.7 -3.35073 | opp_overlap 2473318 2473316 ATCATTGTTAATTAA TTCGACCAGTCAGCA AATA TGCTGACTGGTCGAA CATAGTTTGCTAAAA EcSMS35_2426 2475140 - 2473374 - | von Willebrand factor type A domain-containing protein TERM 3235 2474069 - 2474084 + g 81 -4.6 -5.055 | opp_overlap 2474069, overlap 2474057 ACGTGGACAGAGAAA CACCGG ACTC CCGCTG TTTTTTGACCATTGA EcSMS35_2427 2475264 - 2475130 - | hypothetical protein TERM 3236 2475432 - 2475409 - H 83 -4 -5.38249 | gap 1 AGCAATTAGAAAAAA CAGTTCGT-TA TCT TACACAAACTG TGCATCCCCGTAGTG EcSMS35_2428 2475432 - 2476253 + | M28 family peptidase TERM 3237 2476279 - 2476256 - f 70 -2.5 -5.02606 | CAGTAAACAATAAAA TTTTCTCGA GGCGGG TCCAGAAAA AGCAACATGCGCATT EcSMS35_2429 2476353 - 2476856 + | hypothetical protein TERM 3238 2476880 - 2476900 + T 72 -8.2 -3.97368 | opp_overlap 2476881, overlap 2476881 GGGCACCAAAAAAAA ACCGCCGA ACATG TCGGCGGC TTTCTGAATTACGAA TERM 3239 2476881 - 2476899 + T 80 -11.7 -2.981 | opp_overlap 2476881, overlap 2476880 GGCACCAAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGAATTACGA TERM 3240 2476899 - 2476881 - T 100 -11.7 -6.15828 | opp_overlap 2476880 2476881 GGCACCAAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGAATTACGA nuoN 2478381 - 2476924 - | NADH-quinone oxidoreductase, N subunit TERM 3241 2477563 - 2477551 - G 73 -9.1 -3.67296 | GATGATGGAGGCAAA GGCGA TAA TCGCC AGCACCACCCGAATC nuoM 2479917 - 2478388 - | NADH-quinone oxidoreductase, M subunit TERM 3242 2479709 - 2479697 - G 75 -6.9 -4.41956 | ATAGAGATACCAAAA CGCGG GAT CCACG GCATGTCGAATTCAG TERM 3243 2480001 - 2480043 + r 72 -7.7 -3.88232 | gap 1, overlap 2480002 TCTCTTCGGACTGGG GGTAGTGTCGGATGCACCGC GAAT GCGGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 3244 2480002 - 2480042 + r 78 -11.2 -2.92618 | gap 1, overlap 2480001 CTCTTCGGACTGGGG GTAGTGTCGGATGCACCGC GAAT GCGGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2481916 - 2480081 - | NADH-quinone oxidoreductase, L subunit TERM 3245 2480577 - 2480595 + g 72 -4.6 -4.68601 | overlap 2480575 CTGTGAGTTACCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT nuoK 2482221 - 2481919 - | NADH-quinone oxidoreductase, K subunit nuoJ 2482772 - 2482218 - | NADH-quinone oxidoreductase, J subunit nuoI 2483326 - 2482784 - | NADH-quinone oxidoreductase, I subunit nuoH 2484318 - 2483341 - | NADH-quinone oxidoreductase, H subunit TERM 3246 2483711 - 2483687 - G 77 -12.1 -2.71712 | overlap 2483686 TCCGGCTGGTCAAAC GGGTGACGGTG ACA CACCGCCACGC CCGCGATGGCAAAGG nuoG 2487041 - 2484315 - | NADH-quinone oxidoreductase, G subunit TERM 3247 2486278 - 2486289 + g 70 -5.8 -4.27316 | TAGTGGTTTACTGTA CCGT TGTA ACGG TTTTCGATTCGACGC TERM 3248 2486933 - 2486914 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2488431 - 2487094 - | NADH-quinone oxidoreductase, F subunit TERM 3249 2487553 - 2487567 + g 88 -11.4 -3.84451 | opp_overlap 2487538 GTCGGTGCCCGCGCC GCCTGG CTG CCAGGC TTTGAATTTCAGACC TERM 3250 2488354 - 2488368 + g 81 -10 -3.96148 | overlap 2488353 GCTGCGGTATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2488928 - 2488428 - | NADH-quinone oxidoreductase, E subunit nuoC 2490733 - 2488931 - | NADH-quinone oxidoreductase, C/D subunit TERM 3251 2490453 - 2490442 - G 72 -5.8 -4.41548 | opp_overlap 2490451, overlap 2490450 2490451 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 3252 2490474 - 2490450 - G 74 -3.3 -4.89729 | opp_overlap 2490451, overlap 2490442 2490451 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT nuoB 2491489 - 2490827 - | NADH-quinone oxidoreductase, B subunit nuoA 2491948 - 2491505 - | NADH-quinone oxidoreductase, A subunit TERM 3253 2491650 - 2491636 - GH 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC EcSMS35_2443 2491920 - 2492051 + | hypothetical protein TERM 3254 2492501 - 2492536 + Tr 90 -8.9 -4.67556 | opp_overlap 2492485 2492504, overlap 2492502 2492504 GCTTTTTACTAAAAA AAAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTCG TTTTTACACTATTGT TERM 3255 2492502 - 2492535 + Tr 90 -12.4 -3.39449 | opp_overlap 2492485 2492504, overlap 2492501 2492504 CTTTTTACTAAAAAA AAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTC GTTTTTACACTATTG TERM 3256 2492504 - 2492533 + Tr 95 -15 -3.25567 | opp_overlap 2492485 2492504, overlap 2492502 2492501 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTACACTAT TERM 3257 2492533 - 2492504 - TR 100 -15 -5.86061 | opp_overlap 2492504 2492502 2492501, overlap 2492485 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTACACTAT lrhA 2493516 - 2492578 - | transcriptional regulator LrhA TERM 3258 2492798 - 2492826 + g 78 -8.7 -4.25104 | overlap 2492799 GGACTCATCATCTCG ACCGGCCTTGCCG TCA CGCCAAGACCGGC TTTTACTGCCGCACG TERM 3259 2492799 - 2492825 + g 81 -12.2 -3.14848 | overlap 2492798 GACTCATCATCTCGA CCGGCCTTGCCG TCA CGCCAAGACCGG CTTTTACTGCCGCAC TERM 3260 2493266 - 2493240 - G 72 -11.1 -3.12482 | opp_overlap 2493247, overlap 2493244 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGAATTTTTC TERM 3261 2494441 - 2494425 - H 74 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC EcSMS35_2445 2494436 - 2495653 + | aminotransferase, classes I and II TERM 3262 2495663 - 2495689 + F 100 -13.8 -3.28791 | CTGTAATCTTAATTT CACTGCCGGA GATTGCA TCCGGCAGTG TTATCCCGCCACAAT TERM 3263 2496042 - 2496032 - g 77 -3.2 -5.09225 | opp_overlap 2496032, overlap 2496019 2496018 AGGCGATTGAAAAAA TCGC TCA GCAA AAACTGGTCGATATG TERM 3264 2496245 - 2496218 - g 70 -4.8 -4.56597 | gap 1, overlap 2496220 2496233 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG CCGCAGCCAGGAGAT yfbR 2495737 - 2496336 + | 5'-nucleotidase TERM 3265 2496344 - 2496391 + T 80 -10.6 -3.28712 | gap 1, opp_overlap 2496340 CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCGGGC AATAAGC GCCGGATGCGACATCAGCCTC TTGTCAAAACGGAAA EcSMS35_2447 2498227 - 2496395 - | putative transporter TERM 3266 2498294 - 2498277 - R 100 -9.8 -5.24129 | TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG yfbT 2498964 - 2498314 - | sugar-phosphatase, YfbT EcSMS35_2449 2499469 - 2498975 - | YfbU domain-containing protein TERM 3267 2499526 - 2499508 - R 100 -6 -5.76949 | opp_overlap 2499508 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 3268 2499508 - 2499526 + r 76 -6 -4.55689 | opp_overlap 2499508 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT EcSMS35_2450 2500007 - 2499552 - | putative inner membrane protein YfbV EcSMS35_2451 2500207 - 2500076 - | hypothetical protein ackA 2500345 - 2501547 + | acetate kinase TERM 3269 2501551 - 2501578 + F 100 -16.4 -4.36914 | gap 1, overlap 2501553 CTGACTGCCTGATTT CA-CACCGCCAGC TAA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 3270 2501553 - 2501575 + F 100 -19.2 -2.8733 | overlap 2501551 GACTGCCTGATTTCA CACCGCCAGC TAA GCTGGCGGTG CTGTTTTGTAACCCG TERM 3271 2502129 - 2502113 - g 74 -2.9 -5.00616 | CGGCGGTGCAAAAAA CACCAAT ATT ACCGGCG TTATCGTTAACAAAC TERM 3272 2502593 - 2502608 + G 78 -9 -3.96148 | CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2501622 - 2503766 + | phosphate acetyltransferase TERM 3273 2503807 - 2503829 + F 100 -15 -5.64304 | CTGCGGATATCGGAA CCGGAAATAG TCA CTATTTCCGG TTTTTTATTCTCTTA TERM 3274 2504779 - 2504798 + G 74 -8.6 -3.87149 | overlap 2504751 TTCGTGAAAAGCAGG CGGATGTT GAAC AACGTCCG TTTACCTTTGGTGAC EcSMS35_2454 2503935 - 2505476 + | C4-dicarboxylate anaerobic carrier protein TERM 3275 2505486 - 2505503 + T 100 -12.7 -5.32944 | opp_overlap 2505481 2505488 CACTAAAAATGTTAA GAGCCGC AATT GCGGCTC TTTTTTCATTCTGCC TERM 3276 2505501 - 2505488 - T 72 -9.5 -3.17553 | opp_overlap 2505486, overlap 2505481 CTAAAAATGTTAAGA GCCGC AATT GCGGC TCTTTTTTCATTCTG EcSMS35_2455 2506051 - 2505509 - | NUDIX family hydrolase TERM 3277 2505597 - 2505615 + g 82 -9.6 -4.16016 | opp_overlap 2505596 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA EcSMS35_2456 2506660 - 2506109 - | phosphodiesterase EcSMS35_2457 2507360 - 2506716 - | glutathione S-transferase domain-containing protein TERM 3278 2507052 - 2507067 + g 86 -9 -4.42386 | CCAGGCCTGAATCTG TCGTGC ACGC GCACGA TTTTCTAAATCAAGC EcSMS35_2458 2507497 - 2508144 + | glutathione S-transferase folX 2508201 - 2508563 + | D-erythro-7,8-dihydroneopterin triphosphate epimerase TERM 3279 2509041 - 2509001 - g 78 -9 -3.93583 | gap 1, overlap 2508986 GAATTTACCCATAAA CTCTGCGCCCG-CTGGGAA GAAA TTGCCTGTCGGGCACAAAG TGACAAAACGCGAGT EcSMS35_2460 2508584 - 2509477 + | NAD-binding domain-containing protein EcSMS35_2461 2510427 - 2509525 - | hypothetical protein TERM 3280 2510403 - 2510391 - G 71 -9.1 -3.51168 | overlap 2510389 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 3281 2510619 - 2510592 - R 72 -7.6 -4.08064 | overlap 2510594 AATTTCCCTTGAAAA TACTCCGGCAGC GTTA GCTACCGGAGGG GGAATTATTTCAGCG TERM 3282 2510617 - 2510594 - R 100 -14.6 -3.63744 | overlap 2510592 TTTCCCTTGAAAATA CTCCGGCAGC GTTA GCTACCGGAG GGGGAATTATTTCAG hisP 2511397 - 2510624 - | histidine ABC transporter, ATP-binding protein hisM 2512121 - 2511405 - | histidine ABC transporter, permease protein HisM TERM 3283 2511430 - 2511443 + g 72 -4.5 -4.64766 | opp_overlap 2511421, overlap 2511431 GAAGAAGGTTTCACA TGCTG CAAC CAGCG TTTTTCCGCTCTGCG hisQ 2512804 - 2512118 - | histidine ABC transporter, permease protein HisQ hisJ 2513676 - 2512894 - | histidine ABC transporter, periplasmic histidine-binding protein TERM 3284 2513536 - 2513548 + g 93 -6.3 -5.27477 | opp_overlap 2513535 ATCGAAGCCAACCAG TTCAC CTT GTGAA TTTTTTGATTCAAAT argT 2514679 - 2513897 - | lysine-arginine-ornithine-binding periplasmic protein TERM 3285 2514023 - 2514046 + g 100 -5.2 -5.56264 | ATCTTTACGCAGCCC TACACCGGTG CCGT CACCGAAGTA TTTTTTGTCTTTCAC TERM 3286 2514936 - 2514918 - R 100 -13.2 -4.07687 | overlap 2514929 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG ubiX 2515514 - 2514945 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3287 2515596 - 2515578 - R 81 -12.4 -2.53263 | GGGAGTTGCAAGTCA GGGTGCCA GAA CGGCACCC TGAGCGAAGGCATCA purF 2517126 - 2515609 - | amidophosphoribosyltransferase TERM 3288 2516028 - 2516041 + g 73 -3.7 -4.82901 | GGACGATGGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 3289 2516897 - 2516863 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TAGGGTAACGCACAT cvpA 2517651 - 2517163 - | CvpA protein TERM 3290 2517779 - 2517754 - R 93 -9.8 -5.1356 | GCGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC EcSMS35_2470 2518549 - 2517887 - | sporulation and cell division repeat-containing protein folC 2519807 - 2518539 - | tetrahydrofolate synthase/dihydrofolate synthase TERM 3291 2519206 - 2519219 + g 70 -3.7 -4.65895 | opp_overlap 2519191 GGCATTTCCGGCTCA CCGAC AATT GCCGG TTTTTCGCTGCGGAA TERM 3292 2519783 - 2519759 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 3293 2519844 - 2519866 + r 100 -14.8 -3.45054 | opp_overlap 2519844 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 3294 2519866 - 2519844 - R 100 -17 -4.46656 | opp_overlap 2519844 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2520791 - 2519877 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 3295 2520935 - 2520923 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC GGAGTTACTTTTTAT EcSMS35_2473 2521606 - 2520947 - | DedA family membrane protein TERM 3296 2521623 - 2521679 + r 70 -7.3 -3.90241 | overlap 2521634 2521674 TTTGCCTATGCCTTG TACTCGTCATCTTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAATGTTCCGAGCG TTATTCTCGTTAGTC TERM 3297 2521634 - 2521668 + r 93 -15.2 -3.03338 | overlap 2521623 CTTGTACTCGTCATC TTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCGTTAT truA 2522501 - 2521689 - | tRNA pseudouridine synthase A TERM 3298 2522250 - 2522281 + g 100 -13.6 -3.57144 | CGCATTTACGCCCAA CGTCCACGCAGCGT CTTT GCGCTGCGCGGTCG TTTCGAAATGCACAA EcSMS35_2475 2523514 - 2522501 - | aspartate-semialdehyde dehydrogenase family protein TERM 3299 2523321 - 2523305 - GH 91 -5.7 -5.4505 | GCCTGCAACAAAAAA CGCCAGC TGC GCCTGCG TCCAGTCGAATTCAG TERM 3300 2523567 - 2523540 - gR 74 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATATTA CAGCAGAGAGC ATGAAGAAGAGATTA EcSMS35_2477 2523495 - 2523608 + | hypothetical protein pdxB 2524716 - 2523580 - | erythronate-4-phosphate dehydrogenase TERM 3301 2525262 - 2525230 - g 74 -2.8 -4.90266 | gap 2, overlap 2525233 2525260 CGGAGCAATTAAAAA CCATTCTCAC--CCTG TTG CAGGAAGGGAAAATGG TTATTCCGCAACCAC EcSMS35_2479 2524815 - 2525810 + | div protein EcSMS35_2478 2526985 - 2525807 - | major facilitator transporter TERM 3302 2526932 - 2526916 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGCGA TGCGG AAGAGCGAAAAATTG TERM 3303 2527146 - 2527177 + r 86 -12.4 -3.14132 | opp_overlap 2527153, overlap 2527153 CGATTGTCAATGATG TGAAAAAGGGAACC ATCG GGTTCCCTTTTGCG TTAGTGCCGGAGGCC TERM 3304 2527170 - 2527153 - R 100 -11.3 -4.64598 | opp_overlap 2527146 2527153 CAATGATGTGAAAAA GGGAACC ATCG GGTTCCC TTTTGCGTTAGTGCC TERM 3305 2527153 - 2527170 + r 93 -11.3 -4.30014 | opp_overlap 2527153, overlap 2527146 CAATGATGTGAAAAA GGGAACC ATCG GGTTCCC TTTTGCGTTAGTGCC fabB 2528437 - 2527217 - | 3-oxoacyl-[acyl-carrier-protein] synthase 1 TERM 3306 2528501 - 2528486 - H 70 -9 -3.24924 | overlap 2528484 TTCGCATGCACAATA GCGTAC ACTT GTACGC CGAACAAGTCCGATC mnmC 2528596 - 2530602 + | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TERM 3307 2530619 - 2530652 + T 84 -13.1 -2.64962 | overlap 2530619 CTGCTCTGGCATTGC TTGCCGGATATGGCG TGAA CGCCGCATCCGGCAC ATTACTTACTGCTGT TERM 3308 2530619 - 2530653 + T 85 -11.5 -3.42407 | gap 1, overlap 2530619 CTGCTCTGGCATTGC T-TGCCGGATATGGCG TGAA CGCCGCATCCGGCACA TTACTTACTGCTGTG EcSMS35_2482 2530936 - 2530658 - | hypothetical protein EcSMS35_2483 2531518 - 2530970 - | hypothetical protein EcSMS35_2484 2532327 - 2531518 - | hypothetical protein TERM 3309 2531851 - 2531833 - G 70 -6.6 -4.09685 | overlap 2531834 2531836 GGCCAGCGCGTAAAA CGACCCAG CAG CCGGGCCA AAGAATCCATCGTAA mepA 2533151 - 2532327 - | penicillin-insensitive murein endopeptidase TERM 3310 2533057 - 2533072 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 3311 2533097 - 2533141 + g 80 -5.5 -4.95211 | GCCACGGCGTCGCTG CCAGGCTGGCGCTACTGGC AAGCAGG GCCAGCAGCGCAATCGCGG TTTTGTTCATTTTTT aroC 2534240 - 2533155 - | chorismate synthase TERM 3312 2533797 - 2533811 + g 77 -2.8 -5.03314 | opp_overlap 2533797, overlap 2533799 GATTTCAATACCAAA TTTCTC GGC GAGATA TTTTTTGGCAATCGC TERM 3313 2533832 - 2533849 + g 72 -8.4 -3.85698 | TGGCAATCGCCCCTG CCGCCA CGCGCA TGGCGG TTTCTCGGGCGGAAG TERM 3314 2533870 - 2533896 + g 76 -7.8 -4.19587 | CGGGCGGAAGAGCGC CCGCCGCCGCGA TAA TCGCGCAGGCCG TATTTTTGTTCGTAA prmB 2535207 - 2534275 - | ribosomal large subunit L3 protein glutamine methyltransferase TERM 3315 2535634 - 2535660 + G 78 -5.1 -4.81249 | gap 1, opp_overlap 2535631, overlap 2535631 GAAGCGAAGAAACTG CGGCGC-GGTGA TTAT TCACCGGAGCTG TTTTTGGATTTGCAC EcSMS35_2488 2535373 - 2535924 + | Smr domain-containing protein EcSMS35_2489 2536010 - 2537368 + | SMC domain-containing protein EcSMS35_2490 2537352 - 2538011 + | hypothetical protein TERM 3316 2538041 - 2538017 - T 100 -14.3 -3.54951 | GACCGCATGACATAA CGGATGGCCGA TAC CCGACCATCCG TACCAGAGTCACTAC EcSMS35_2491 2538892 - 2538053 - | hypothetical protein EcSMS35_2492 2539418 - 2538894 - | putative minor fimbrial subunit EcSMS35_2493 2539864 - 2539415 - | putative minor fimbrial protein TERM 3317 2539508 - 2539518 + g 72 -8.2 -3.72576 | TACCGCCGTTAACGC CGGC AAA GCCG TTTCATCCACCACCA EcSMS35_2494 2540373 - 2539882 - | fimbrial protein TERM 3318 2540270 - 2540233 - G 77 -11.9 -3.14146 | overlap 2540225 GACAACATTACCGAA CTCCACCTCCGCGCCCG TTAC CGTACAAGGAGGCGGAG CATCAACAAGCACCC EcSMS35_2495 2541142 - 2540390 - | fimbrial chaperone protein EcSMS35_2496 2543810 - 2541162 - | fimbrial usher protein TERM 3319 2543241 - 2543266 + g 77 -9.7 -3.60792 | GATATCATGTGAGTC CTCGCCACC CTGCTCCT GGTGGCGGG TTTGCGCATTGAGGC TERM 3320 2543882 - 2543860 - R 100 -15.6 -4.56597 | opp_overlap 2543860 TTGCGTGTTGAAAAA CCCCACAGCA GAA CGCTGTGGGG TTGTCACATCAGAGA TERM 3321 2543860 - 2543882 + r 100 -14.9 -3.32844 | opp_overlap 2543860 TTGCGTGTTGAAAAA CCCCACAGC AGAAC GCTGTGGGG TTGTCACATCAGAGA EcSMS35_2497 2544457 - 2543891 - | fimbrial protein TERM 3322 2544179 - 2544191 + g 72 -5.5 -4.46112 | GTTAGTACCGGTGAA CGTGG TCT CCATG TTTGTTTCAGTGGAA TERM 3323 2545017 - 2544987 - RH 76 -8.3 -3.93695 | gap 1, opp_overlap 2544988, overlap 2544988 TGTATGACGGAGAAA CTGCCCGGTGTACG CGCA CGCA-ACCGGGCAT TGATTGCTTAAATTG TERM 3324 2545016 - 2544988 - RH 80 -11.8 -2.95896 | gap 1, opp_overlap 2544988, overlap 2544987 GTATGACGGAGAAAC TGCCCGGTGTACG CGCA CGCA-ACCGGGCA TTGATTGCTTAAATT TERM 3325 2544988 - 2545016 + rH 75 -9.6 -3.46482 | gap 1, opp_overlap 2544987 2544988 GTATGACGGAGAAAC TGCCCGGTGTACG CGCA CGCA-ACCGGGCA TTGATTGCTTAAATT sixA 2545510 - 2545025 - | phosphohistidine phosphatase SixA EcSMS35_2499 2545487 - 2545639 + | hypothetical protein fadJ 2547857 - 2545713 - | fatty oxidation complex, alpha subunit FadJ TERM 3326 2546060 - 2546072 + g 88 -2.6 -5.46698 | TGAGCGGGTAAATGG CGGG ATCGA CCTG TTTTTTGCTTTTACG fadI 2549167 - 2547857 - | acetyl-CoA C-acyltransferase FadI TERM 3327 2548316 - 2548355 + g 76 -9.4 -3.76492 | overlap 2548322 CCGCGATTCAGTCAT CAGGATCACCGCTG-CCG CGCCAT CGGTCAGCGGTG-TACTG TTTGCTGCCGTTACC TERM 3328 2548322 - 2548350 + g 78 -12.5 -2.87501 | gap 1, overlap 2548316 TTCAGTCATCAGGAT CACCGCTG-CCG CGCCAT CGGTCAGCGGTG TACTGTTTGCTGCCG TERM 3329 2549304 - 2549330 + r 87 -13.6 -2.87132 | opp_overlap 2549304 GAAGAGAAAATAAAA CGCCCCCGCCAG GAA CTGACAGGGGCG TATATACCCGAGAGG TERM 3330 2549330 - 2549304 - R 100 -18 -5.26907 | opp_overlap 2549304 GAAGAGAAAATAAAA CGCCCCCGCCAG GAA CTGACAGGGGCG TATATACCCGAGAGG EcSMS35_2502 2549632 - 2549348 - | hypothetical protein EcSMS35_2503 2550004 - 2551344 + | long-chain fatty acid transport protein TERM 3331 2551386 - 2551366 - f 100 -15.5 -3.85698 | opp_overlap 2551366 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCACACT TERM 3332 2551366 - 2551386 + F 100 -15.5 -3.64822 | opp_overlap 2551366 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCACACT EcSMS35_2504 2551711 - 2552958 + | hypothetical protein TERM 3333 2553131 - 2553092 - T 76 -10.3 -3.3785 | opp_overlap 2553102, overlap 2553102 GTAATTGAGGGATAA CAACAAAAAAGGTGAGT TTTGTG ACTCACCTTTTTTATTT GTTTCTTATTCAGAA TERM 3334 2553121 - 2553102 - T 100 -7.9 -5.68489 | opp_overlap 2553102, overlap 2553092 GATAACAACAAAAAA GGTGAGT TTTGTG ACTCACC TTTTTTATTTGTTTC TERM 3335 2553102 - 2553121 + T 100 -8.6 -5.85425 | opp_overlap 2553102 2553092 GATAACAACAAAAAA GGTGAGTT TTGT GACTCACC TTTTTTATTTGTTTC EcSMS35_2505 2553892 - 2553137 - | VacJ family lipoprotein EcSMS35_2506 2554031 - 2553918 - | hypothetical protein EcSMS35_2507 2554186 - 2555118 + | hypothetical protein TERM 3336 2555126 - 2555109 - T 74 -3.3 -5.1286 | GAAAAATGATAAAAA CCCGGCA TAAA TGGCGAG GGTTTAAGCAATCGA EcSMS35_2509 2556236 - 2555706 - | putative outer membrane protein TERM 3337 2556282 - 2556245 - R 73 -9.1 -3.44794 | gap 1, opp_overlap 2556252 AACTCATTATGACAA CCCTGAGGTGGCAGGAGG TCC CCTCCTGCCA-CTGTGTG ATTAGAATATATATT TERM 3338 2556252 - 2556276 + r 100 -20.1 -3.00774 | opp_overlap 2556245 TATGACAACCCTGAG GTGGCAGGAGG TCC CCTCCTGCCAC TGTGTGATTAGAATA EcSMS35_2510 2564197 - 2556284 - | outer membrane autotransporter TERM 3339 2562765 - 2562753 - G 75 -5.5 -4.67982 | GCCGAGTTAATAAAA GAGCC TCC AGCTC CAACATTTACACCTC TERM 3340 2563043 - 2563018 - G 79 -2.5 -5.28942 | opp_overlap 2563020, overlap 2563019 2563020 2563036 TATCCCAAACAAAAA GTGTACCATCG TTAA CAATGGTACTG TCTTGATAGGCAATC TERM 3341 2563456 - 2563470 + g 90 -7.2 -5.08824 | TTGTTCCAGCATATT TCATTG AGT CAATGA TTTTTTGAGTAACGC EcSMS35_2511 2564842 - 2564222 - | LuxR family transcriptional regulator TERM 3342 2564977 - 2564999 + r 86 -7.7 -4.78077 | opp_overlap 2564979, overlap 2564979 CTATAAATAGCACAA AACGCAGGT AAAAA ACCTGCGTA TTTATTTTAATTCAG TERM 3343 2564997 - 2564979 - R 91 -10.3 -4.59207 | opp_overlap 2564977 2564979 ATAAATAGCACAAAA CGCAGGT AAAAA ACCTGCG TATTTATTTTAATTC TERM 3344 2564979 - 2564997 + r 82 -10.3 -3.99559 | opp_overlap 2564979, overlap 2564977 ATAAATAGCACAAAA CGCAGGT AAAAA ACCTGCG TATTTATTTTAATTC EcSMS35_2512 2565789 - 2565160 - | type 1 fimbriae regulatory protein TERM 3345 2565194 - 2565210 + g 72 -8.1 -3.94773 | CAAAGATTGGGTTTA CATTTTG GGT CAAAATG TTGCTTTTTTGCGTC TERM 3346 2565490 - 2565478 - G 72 -6.3 -4.41348 | opp_overlap 2565478 TGTTCGGGAAACAAA TAACC ACG GGTTA TCATTGAAATGTTTA TERM 3347 2565714 - 2565696 - G 73 -3.8 -4.74539 | AATAAGCCAATAAAA TCATGCAA ACA TCGCGTGA AGAGCAACTCTTTTG TERM 3348 2566504 - 2566469 - H 74 -2 -5.24129 | gap 1, opp_overlap 2566469 2566473 2566479, overlap 2566479 TTTGCTTATAAAAAA CAAGCAATAA-TACCAG GCT CTGGTATTTATAGTTTA TTTTTTAACTTAATT TERM 3349 2566469 - 2566504 + H 74 -2 -5.1848 | gap 1, opp_overlap 2566469 2566479, overlap 2566473 2566479 TTTGCTTATAAAAAA CAAGCAATAA-TACCAG GCT CTGGTATTTATAGTTTA TTTTTTAACTTAATT TERM 3350 2566473 - 2566500 + H 79 -5 -5.08015 | gap 1, opp_overlap 2566469 2566479, overlap 2566469 2566479 CTTATAAAAAACAAG CAATAA-TACCAG GCT CTGGTATTTATAG TTTATTTTTTAACTT TERM 3351 2566493 - 2566479 - H 76 -8.6 -3.97003 | opp_overlap 2566473 2566469 2566479, overlap 2566469 AAAAACAAGCAATAA TACCAG GCT CTGGTA TTTATAGTTTATTTT TERM 3352 2566479 - 2566493 + H 80 -8.6 -4.24747 | opp_overlap 2566479 2566469, overlap 2566473 2566469 AAAAACAAGCAATAA TACCAG GCT CTGGTA TTTATAGTTTATTTT TERM 3353 2566742 - 2566732 - g 83 -5.4 -5.03145 | CAAGCGTTTAAAAAA TGGA TTA TCCA CAGTACATCCCCTGC TERM 3354 2566825 - 2566837 + G 71 -2.7 -4.73677 | AGTAAAAAAACCTTT TGAAG ACT CTTTA TTTCTTTCTTGTCAA EcSMS35_2513 2566538 - 2567107 + | type 1 fimbriae regulatory protein TERM 3355 2567122 - 2567139 + T 84 -9.9 -4.18058 | opp_overlap 2567121 2567122 2567133, overlap 2567133 2567135 ACCCCTGTTCTAAAG GCCTCAA TTCA TTGAGGC TTTTAGCCTCTCATT TERM 3356 2567135 - 2567149 + T 76 -10 -3.32317 | opp_overlap 2567122 2567121 2567133, overlap 2567122 2567133 AGGCCTCAATTCATT GAGGCT TTT AGCCTC TCATTTTTATGACAT TERM 3357 2567227 - 2567237 + T 79 -2.6 -5.44119 | overlap 2567221 TAAATCACCTTTTTA TTAA AAA TTAA TTTTTTTAAAGTCAC TERM 3358 2567292 - 2567282 - T 74 -3.2 -5.12971 | AATATTTAATAAAAA TGCC ACC AGCA AATATATTGCCACTT dsdC 2568449 - 2567502 - | D-serine deaminase transcriptional activator TERM 3359 2568609 - 2568620 + H 86 -2.2 -5.626 | AATTTTATCGTTTGT CAGC CTGC GTTG TTTTTTTGTCCAATA EcSMS35_2515 2568667 - 2570004 + | gluconate:H+ symporter (GntP) family protein TERM 3360 2570410 - 2570376 - g 70 -5.6 -4.36914 | opp_overlap 2570377 TCCGGCTCCATAAAA GCACGCGGCGGGATTT ATG AAGTCCTGGCACATGC AGAAAAACTGGCTCT dsdA 2570037 - 2571353 + | D-serine ammonia-lyase emrY 2572996 - 2571458 - | multidrug resistance protein Y TERM 3361 2572567 - 2572578 + g 82 -2.2 -5.31877 | TAGACCATAATGCCA GAGC AAAT GTTC TTTTTTCTGGTGGAT emrK 2574159 - 2572996 - | drug resistance MFS transporter, membrane fusion protein (MFP) subunit EmrK evgA 2574575 - 2575189 + | positive transcription regulator EvgS TERM 3362 2575493 - 2575468 - g 75 -5.5 -4.60924 | overlap 2575457 TAAATCTTTTAAAAA GAGCGTTAAAT ATCA AATTAACACTC CGGGAATACGCAGAT TERM 3363 2576431 - 2576412 - g 100 -4.3 -5.66989 | opp_overlap 2576412 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC ATATTATTATGAGCT TERM 3364 2577214 - 2577231 + G 70 -5.5 -4.42513 | CCTTATGTAATCTGC CAGCAAG CGAA CATGCTG TTTATATTTGTGGTT TERM 3365 2577325 - 2577306 - g 70 -3.6 -4.65722 | gap 1, overlap 2577314 GTAGAGAGAAATAAA GCGATCAAT GCA ACTG-TCGC AAAAAGCCAGTTTCT TERM 3366 2577343 - 2577331 - g 90 -9.1 -4.58283 | CAACTGTCGCAAAAA GCCAG TTT CTGGC AACAATGAGTCACGA evgS 2575404 - 2578787 + | sensor histidine kinase/response regulator EvgS TERM 3367 2578794 - 2578820 + T 83 -11.6 -3.34517 | opp_overlap 2578789, overlap 2578789 2578792 AATGACTAAATTGCG GCTCCCACAATG TTC TAATGTGGGAGC TATTTACCAGCACAT EcSMS35_2521 2579988 - 2578843 - | L-carnitine dehydratase TERM 3368 2578916 - 2578931 + g 75 -4.6 -4.87786 | opp_overlap 2578910, overlap 2578887 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 3369 2580033 - 2580009 - R 81 -6.5 -5.0133 | gap 1, opp_overlap 2580008 2580009 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA EcSMS35_2522 2581006 - 2580062 - | auxin efflux carrier family protein EcSMS35_2523 2582769 - 2581075 - | thiamine pyrophosphate-dependent enzyme TERM 3370 2582098 - 2582071 - G 76 -7.9 -4.16842 | gap 1, opp_overlap 2582079 GGCACTTTCAATAAA TTCACGAAGCTG TTCAT CAGCTT-GTGAA TACGCCGCGCCTTTG TERM 3371 2582591 - 2582576 - G 77 -6.1 -4.63218 | overlap 2582577 2582578 TTTTGGGTAAGAAAA CCGCT TGCCGC AGCGG CATAGCCTGCCGACT frc 2584073 - 2582823 - | formyl-coenzyme A transferase TERM 3372 2583960 - 2583922 - G 70 -10.2 -3.18849 | opp_overlap 2583920 2583916, overlap 2583920 TCGATATCAGGAATA TCTCGCAGCTGGTGACGC GTT ACGTCACCAACGCCGGGA CGTTCAATTTTAATG TERM 3373 2584530 - 2584494 - R 100 -13.3 -3.92542 | opp_overlap 2584493 2584492 GCGAGCGCCAAATAA TTTTATGGCCACAAC CTGTCGT ATTGTGGCCATAAAA AATTGTCGGCTGGAG EcSMS35_2525 2585208 - 2584585 - | hypothetical protein EcSMS35_2526 2585562 - 2585437 - | hypothetical protein TERM 3374 2585558 - 2585572 + Gg 75 -4.3 -4.85822 | GTCTCTATTATGGCA TGCAA TGTTT TTGCA TTTTCTATTTCTGGT TERM 3375 2585638 - 2585625 - gR 100 -6.7 -5.46276 | AAGAGACAGAAAAAA CGTCA ATGA TGACG ACAACTCATTCTACA EcSMS35_2527 2585504 - 2585779 + | putative lipoprotein EcSMS35_2528 2586098 - 2585856 - | hypothetical protein EcSMS35_2529 2586451 - 2587371 + | lipid A biosynthesis lauroyl acyltransferase family protein TERM 3376 2587405 - 2587432 + F 100 -11.4 -5.4756 | opp_overlap 2587405 2587402 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3377 2587432 - 2587405 - f 78 -11.4 -2.90496 | opp_overlap 2587405, overlap 2587402 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT EcSMS35_2530 2587682 - 2587798 + | hypothetical protein TERM 3378 2587821 - 2587840 + T 100 -13.6 -3.89215 | opp_overlap 2587821 CTGTGCAATGAAAAA CAGGAGCC ATCT GGCTCCTG TTTGCATTTCTGGCG TERM 3379 2587840 - 2587821 - T 100 -13.6 -4.8622 | opp_overlap 2587821 CTGTGCAATGAAAAA CAGGAGCC ATCT GGCTCCTG TTTGCATTTCTGGCG EcSMS35_2531 2589101 - 2587863 - | aminotransferase, classes I and II TERM 3380 2588309 - 2588320 + g 77 -5.8 -4.63218 | TAATACGTGCCAACG CGCT GACC AGCG TTTTGTTACCGACCA TERM 3381 2589146 - 2589163 + H 70 -6.9 -4.11394 | overlap 2589148 2589159 ACCGTCCGAGCGACG CTGCCAC GATG GTGGCTG TTTTGAAAATAGCCT TERM 3382 2590085 - 2590072 - g 70 -3.7 -4.59773 | opp_overlap 2590075, overlap 2590074 2590075 GTTGAGGGCGAAAAA GAGGC CAGC GCCGC GCGGCAGGCCAAGCT TERM 3383 2590095 - 2590074 - g 72 -7.9 -3.91506 | gap 1, opp_overlap 2590075, overlap 2590072 2590075 TGAGGGCGAAAAAGA GGCCAG-CGC CGC GCGGCAGGCC AAGCTGGCGCTGGAT TERM 3384 2590346 - 2590325 - g 81 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC EcSMS35_2532 2589496 - 2591175 + | sensor histidine kinase EcSMS35_2533 2591190 - 2591924 + | response regulator TERM 3385 2592043 - 2592064 + G 70 -5.9 -4.25437 | gap 1, overlap 2592019 GGTTTGCCAGCCAGC CTGCCTCATT GCC AGTG-GGCAG TTTATGTATTGATTT TERM 3386 2592459 - 2592475 + G 84 -7.9 -4.60797 | ATGCCACCGGGCAAT TCGCAGC CGC GCGGCGA TTTTCTCTATCACAG TERM 3387 2592528 - 2592551 + G 82 -3 -5.21709 | overlap 2592538 2592539 AATTATGCCCAGCAG CTCACCCGCG AGAG CGTGGCTCAG TTTTTTAATATCACG EcSMS35_2534 2591937 - 2592794 + | AraC family transcriptional regulator fryA 2595292 - 2592797 - | multiphosphoryl transfer protein 1 EcSMS35_2536 2596354 - 2595317 - | aminopeptidase ypdF 2597439 - 2596354 - | aminopeptidase YpdF TERM 3388 2596656 - 2596614 - G 81 -13.2 -2.71144 | CAGCCTCGGTAATCA CCCGGCGCGCGGCGTCGTCA ACC TGCTGGCAGCGCACGCCGGG GCGAATCGCGGAGAT TERM 3389 2596800 - 2596759 - G 77 -11.8 -3.22298 | gap 2 GCCATTCACCAGCAA GGTGCGCGTCATATCAGAGC AGTA GCCCTGATAC-A-GCGCACC AAAATCAAGAGTGAC TERM 3390 2596838 - 2596889 + g 81 -13 -2.62184 | gap 1, opp_overlap 2596837, overlap 2596822 CCCGCTGCAACAATC TTGTCGCTGGC-TTTGCCGTGCGGC AGC GCCCCACGCCAGCCGCTGGCGACAA TGGTATCGAAAGAGG fryC 2598701 - 2597454 - | PTS system, fructose-like, IIC component TERM 3391 2598129 - 2598155 + g 76 -12.4 -2.50994 | opp_overlap 2598131 2598136, overlap 2598128 2598131 2598136 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCACTTCAC TERM 3392 2598136 - 2598148 + g 72 -5.5 -4.56607 | opp_overlap 2598131 2598136, overlap 2598131 2598129 2598128 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC TERM 3393 2598606 - 2598616 + g 70 -6.8 -4.08767 | overlap 2598590 CTGCGGGAGTTCACC CCAG AAG CTGG TTTTAGAGGCCTGCG EcSMS35_2539 2599049 - 2598723 - | PTS system, fructose specific IIB subunit TERM 3394 2599252 - 2599233 - R 80 -12.2 -2.95081 | opp_overlap 2599233, overlap 2599230 TGATTTAAAAGATTA TCGGGAGA GTTA TCTCCCGA TTTGACAGGAAGGAT TERM 3395 2599233 - 2599252 + r 88 -12.2 -3.53091 | opp_overlap 2599230 2599233 TGATTTAAAAGATTA TCGGGAGA GTTA TCTCCCGA TTTGACAGGAAGGAT glk 2600233 - 2599268 - | glucokinase EcSMS35_2541 2600437 - 2601693 + | chloride channel (ClC) family protein EcSMS35_2542 2601808 - 2602134 + | hypothetical protein TERM 3396 2602164 - 2602152 - T 71 -9.1 -3.30243 | overlap 2602136 ACGTAGGGCGGATAA GGCGT TTT ACGCC GCATCCGCCAGTGAT mntH 2603440 - 2602202 - | manganese transport protein MntH TERM 3397 2602600 - 2602573 - G 74 -3.4 -5.00138 | gap 1 GACTTAAACCAAAAA CCGTTGCCGCAGC ATG GCTT-AACAACGG TTGCAGCGTCAGATA TERM 3398 2603471 - 2603456 - H 72 -7.6 -4.07568 | opp_overlap 2603456 2603451 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTATGTCA TERM 3399 2604369 - 2604390 + G 70 -7.3 -4.00782 | TGTCGTTGCGGCGCT GGTACTGAA CATG TTCAGCACC TTTATCGTGCTGTCG nupC 2603776 - 2604978 + | nucleoside transporter NupC TERM 3400 2605022 - 2604986 - T 87 -14 -2.9155 | gap 1, opp_overlap 2604996, overlap 2604995 2604996 TGCTGTAAGACCATA CATAAAAAAGCCGGGGA TAAT TCCCCGG-TTTTTTACG CCTGTTAATCAGCTA TERM 3401 2605014 - 2604995 - T 100 -9.2 -5.43414 | opp_overlap 2604996, overlap 2604986 2604996 ACCATACATAAAAAA GCCGGGGA TAAT TCCCCGGT TTTTTACGCCTGTTA TERM 3402 2604996 - 2605013 + T 100 -12.7 -5.04987 | opp_overlap 2604995 2604986 2604996 CCATACATAAAAAAG CCGGGGA TAAT TCCCCGG TTTTTTACGCCTGTT TERM 3403 2605013 - 2604996 - T 100 -12.7 -3.84422 | opp_overlap 2604996, overlap 2604995 2604986 CCATACATAAAAAAG CCGGGGA TAAT TCCCCGG TTTTTTACGCCTGTT EcSMS35_2545 2607216 - 2605027 - | diguanylate cyclase TERM 3404 2606452 - 2606434 - G 72 -4.4 -4.70659 | GGTGAGATTTAAAAA CGGATAGC GAA GCTTACCG ACACCGAGGGTAAAG TERM 3405 2606497 - 2606481 - G 77 -2.9 -5.03227 | AGATGATAAAGAAAA CAGGTAC CAG GTAACCG GCAATAAAGTCATTT TERM 3406 2607414 - 2607395 - H 100 -11.4 -5.43414 | opp_overlap 2607395 AGCAGAGACAAAAAA CCCCCGCT TTAC AGCGAGGG TTTGAAATTTGGTGG TERM 3407 2607395 - 2607414 + H 77 -9.2 -3.73107 | opp_overlap 2607395 AGCAGAGACAAAAAA CCCCCGCT TTAC AGCGAGGG TTTGAAATTTGGTGG EcSMS35_2548 2607850 - 2608194 + | hypothetical protein TERM 3408 2608321 - 2608307 - g 71 -2.8 -4.87318 | overlap 2608299 TGGAAAACGGAAAAA TTTCCC GGC GTGAAA GGCGGTCGTGCCAGA EcSMS35_2549 2608196 - 2608588 + | hypothetical protein TERM 3409 2608627 - 2608644 + F 70 -9.9 -2.94888 | overlap 2608625 2608640 AGGATCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT TERM 3410 2608722 - 2608708 - f 72 -8.5 -3.70773 | CTCCACAGGCAAGAA CGGCG TGCCC CGCCG CTAAAATGTTACGAG TERM 3411 2609203 - 2609216 + F 71 -3.8 -4.83615 | overlap 2609190 2609188 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG TERM 3412 2609493 - 2609524 + F 91 -10.2 -4.65895 | gap 1 CGAGCTTAACGCCCT GCGGGTAGCGGAATG CAT CATTCTG-TCCCCGC TTTTTGAATCGGGGA TERM 3413 2609551 - 2609563 + F 80 -6.3 -4.82901 | GGGAAAAGCAGCCCG CTTCT GGA AGAAG TTTTTGTAAGCCCGC TERM 3414 2609884 - 2609874 - f 77 -4.6 -5.04249 | CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT EcSMS35_2551 2609909 - 2610064 + | hypothetical protein TERM 3415 2610279 - 2610266 - T 70 -6.7 -4.01135 | TTGAACAACAGCAAA CACCT GGTC AGGTG GAAAACCGCGCCTTA TERM 3416 2610330 - 2610285 - T 93 -11.7 -4.11216 | opp_overlap 2610298, overlap 2610286 TGGTCAGGTGGAAAA CCGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACGGCGCAC CGGATAAATAAAAAA TERM 3417 2610329 - 2610286 - T 93 -15.2 -3.06515 | opp_overlap 2610298, overlap 2610285 GGTCAGGTGGAAAAC CGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACGGCGCA CCGGATAAATAAAAA TERM 3418 2610298 - 2610317 + T 86 -10.6 -4.07568 | opp_overlap 2610286 2610285 AACCGCGCCTTATAT CCCCGCCC TGAA GGACGGGG TTTTACGGCGCACCG TERM 3419 2610346 - 2610368 + T 100 -12.7 -4.51238 | opp_overlap 2610346 CGGATAAATAAAAAA CGGCAGGGG TATTT CTCCTGCCG TTTATCTTTTATGCG TERM 3420 2610368 - 2610346 - T 100 -10.5 -5.72622 | opp_overlap 2610346 CGGATAAATAAAAAA CGGCAGGGG TATTT CTCCTGCCG TTTATCTTTTATGCG gltX 2611803 - 2610388 - | glutamyl-tRNA synthetase EcSMS35_2553 2611807 - 2611938 + | hypothetical protein TERM 3421 2612493 - 2612461 - T 72 -9.9 -3.19463 | opp_overlap 2612462 2612470 2612489, overlap 2612462 2612470 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCAATTTGCGA TERM 3422 2612462 - 2612492 + T 89 -14.9 -2.9348 | opp_overlap 2612461 2612462 2612470, overlap 2612470 2612489 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCAATTTGCG TERM 3423 2612492 - 2612462 - T 84 -13.4 -2.51464 | opp_overlap 2612462 2612470 2612489, overlap 2612461 2612470 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCAATTTGCG TERM 3424 2612484 - 2612470 - T 93 -9.2 -5.17576 | opp_overlap 2612470 2612462, overlap 2612462 2612461 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3425 2612470 - 2612484 + T 95 -8.5 -5.24989 | opp_overlap 2612462 2612461 2612470, overlap 2612462 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC xapR 2613454 - 2612570 - | xanthosine operon regulatory protein XapR TERM 3426 2613379 - 2613366 - G 76 -9.5 -3.75535 | TGAGACATATTTAAA CGCGC TGCT GCGCG ACCAAAATGCAACTC EcSMS35_2559 2613654 - 2613496 - | hypothetical protein TERM 3427 2613698 - 2613676 - R 72 -5.5 -4.4648 | ACCTTTATCATAAAA GCAGCCCCA AGGAA CAGAGCTGC GAATCCTTTTAATGT xapB 2614963 - 2613707 - | xanthosine permease XapB TERM 3428 2614387 - 2614399 + g 88 -5.5 -5.24129 | overlap 2614377 CCAGCTTGCTGGCAA GCGAT GTA GTCGC TTTTTTCTCCGCAAC TERM 3429 2614728 - 2614717 - G 79 -2.2 -5.24531 | ATGCCGCATAAAAAA GTAC GCCT GCAC ACACCAGGTGACACA TERM 3430 2615007 - 2614987 - R 74 -11.1 -2.78384 | opp_overlap 2614987 2614988 CCTTGTCGCATCATA TGGCCTCAC TCA GTGAGGCCG TTTATTGTTGTTTTA TERM 3431 2614987 - 2615007 + r 100 -13.3 -4.66418 | opp_overlap 2614987, overlap 2614988 CCTTGTCGCATCATA TGGCCTCAC TCA GTGAGGCCG TTTATTGTTGTTTTA TERM 3432 2614988 - 2615006 + r 100 -14.6 -3.37411 | opp_overlap 2614987, overlap 2614987 CTTGTCGCATCATAT GGCCTCAC TCA GTGAGGCC GTTTATTGTTGTTTT xapA 2615857 - 2615024 - | xanthosine phosphorylase TERM 3433 2615311 - 2615323 + g 78 -9.1 -3.92832 | opp_overlap 2615300 2615299 ACACGCCCTCCGTCA GAGGG AAC CCCTC TTCTTTCGCCACTTT EcSMS35_2562 2616106 - 2616870 + | hypothetical protein EcSMS35_2563 2617834 - 2616908 - | LysR family transcriptional regulator EcSMS35_2565 2617924 - 2618922 + | bile acid/Na+ symporter family protein EcSMS35_2564 2619137 - 2618919 - | hypothetical protein ligA 2621154 - 2619139 - | DNA ligase, NAD-dependent TERM 3434 2621193 - 2621177 - R 95 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAAAGGAGTTA zipA 2622223 - 2621225 - | cell division protein ZipA TERM 3435 2622324 - 2622358 + H 70 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3436 2622477 - 2622487 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3437 2622756 - 2622766 + G 72 -6.8 -4.20516 | AACTGGATTGCCGCT CCGT TCA ACGG TTTATTGGCTGAACA cysZ 2622453 - 2623214 + | CysZ protein TERM 3438 2623275 - 2623252 - f 71 -8 -3.72695 | opp_overlap 2623254, overlap 2623238 2623254 ACCGTTTGTATGAAA CAGGGGTGGC TTAT GCCGCCCCTT ATTCCATCTTGCATG TERM 3439 2623254 - 2623273 + F 100 -12.8 -3.7347 | opp_overlap 2623254 2623252 CGTTTGTATGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3440 2623273 - 2623254 - f 81 -10.6 -3.44848 | opp_overlap 2623254, overlap 2623252 CGTTTGTATGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3441 2623879 - 2623865 - g 82 -3.4 -5.19261 | overlap 2623866 AAATTCACGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2623399 - 2624370 + | cysteine synthase A TERM 3442 2624399 - 2624414 + F 100 -9 -5.26316 | opp_overlap 2624399 2624390 AAAATGCGTAAAAAA GCACCT TTTC AGGTGC TTTTTTGTGGCCTGC TERM 3443 2624414 - 2624399 - f 93 -9 -5.08011 | opp_overlap 2624399, overlap 2624390 AAAATGCGTAAAAAA GCACCT TTTC AGGTGC TTTTTTGTGGCCTGC ptsH 2624754 - 2625011 + | phosphocarrier protein PtsH TERM 3444 2625379 - 2625338 - g 72 -8.9 -3.73402 | gap 1, opp_overlap 2625344 2625344, overlap 2625343 2625346 ATAGCCCTGATTAAA GATAAGCACATGA-CAGCTG ACG CAGCTGCTCATGAAGTTATC GAAGGTCAGGCTTCT TERM 3445 2625371 - 2625346 - g 75 -11.3 -3.00128 | gap 1, opp_overlap 2625344 2625344, overlap 2625343 2625338 GATTAAAGATAAGCA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2625056 - 2626783 + | phosphoenolpyruvate-protein phosphotransferase crr 2626824 - 2627333 + | PTS system, glucose-specific IIA component TERM 3446 2627444 - 2627419 - f 75 -9.1 -3.61398 | opp_overlap 2627419 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 3447 2627419 - 2627444 + F 100 -9.8 -5.61596 | opp_overlap 2627419 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT EcSMS35_2573 2627452 - 2628780 + | IS4 transposase TERM 3448 2628791 - 2628762 - T 88 -9.3 -4.59109 | overlap 2628764 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACGCCCATCGGCGC TERM 3449 2628789 - 2628764 - T 100 -16.3 -3.90762 | overlap 2628762 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACGCCCATCGGC pdxK 2629665 - 2628814 - | pyridoxal kinase TERM 3450 2629105 - 2629118 + g 77 -6.7 -4.56597 | CACCCATTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA EcSMS35_2575 2629770 - 2630138 + | hypothetical protein cysM 2631052 - 2630141 - | cysteine synthase B TERM 3451 2630213 - 2630199 - G 72 -10 -3.32997 | overlap 2630202 CCGGTAGAAAGGTAA CGATCG CCG CGATCG CAGATGATCGCCACA TERM 3452 2631164 - 2631137 - R 90 -9.1 -4.72272 | gap 1, opp_overlap 2631137 2631154 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysA 2632283 - 2631186 - | sulfate/thiosulfate ABC transporter, ATP-binding protein cysW 2633148 - 2632273 - | sulfate ABC transporter, permease protein CysW TERM 3453 2632596 - 2632539 - G 74 -8.3 -3.90318 | gap 1 GCACCACGCCATAAA GCAGC-GCCCAGCGGATGTTCGGCAGCG TGA CGCGACGGAACATCTGCCAGCCAGATGC GCCCAGCAAAATCGC cysT 2633981 - 2633148 - | sulfate ABC transporter, permease protein CysT TERM 3454 2633786 - 2633768 - G 72 -4.5 -4.58685 | opp_overlap 2633781, overlap 2633756 2633781 AAACGCCGTTAAAAA TCGACGC GACAA ACGCCGA CAGCAGCGTCACTTT cysP 2634997 - 2633981 - | sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein TERM 3455 2635142 - 2635119 - R 86 -11 -4.01135 | GGGAATAAGACGAAA TCCTCCCCAC AAAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2635946 - 2635155 - | oxidoreductase UcpA EcSMS35_2582 2636932 - 2636075 - | RpiR family transcriptional regulator TERM 3456 2636561 - 2636586 + g 79 -9.7 -3.72695 | gap 1, opp_overlap 2636579 2636580, overlap 2636561 2636579 2636580 2636582 AATGATTTTTTGCAG CC-GCGCGTAGT CAA ACAACGCGCAGG TTTGCTCCAGCGCCT TERM 3457 2637843 - 2637827 - g 77 -5.8 -4.62302 | CAATATCGTTAAAAA CGCCAC CGGAT GTAGCG CCGAACAAGCGGAAA murQ 2637096 - 2637992 + | N-acetylmuramic acid 6-phosphate etherase TERM 3458 2638823 - 2638835 + G 71 -10.5 -2.93252 | overlap 2638819 GTACCTGATCATTAT GCCGC TGG GCGGC TGGTTATTCGAAGGT murP 2637996 - 2639420 + | PTS system, N-acetylmuramic acid-specific EIIBC component TERM 3459 2639608 - 2639568 - g 76 -12.6 -2.57564 | opp_overlap 2639556 2639568 2639569 2639571 2639604 2639605, overlap 2639567 2639571 GGATCGCTGGATAAG CCAGCAAGTTGATGCCGG TTATC CCGGCGTAAACCTGCTGA TTATAAAAGATAATC TERM 3460 2639568 - 2639608 + G 72 -10.4 -3.30441 | opp_overlap 2639568 2639567 2639571, overlap 2639556 2639569 2639571 2639604 2639605 GGATCGCTGGATAAG CCAGCAAGTTGATGCCGG TTATC CCGGCGTAAACCTGCTGA TTATAAAAGATAATC TERM 3461 2639569 - 2639607 + G 84 -13.9 -2.5805 | opp_overlap 2639568 2639567 2639571, overlap 2639556 2639568 2639571 2639604 2639605 GATCGCTGGATAAGC CAGCAAGTTGATGCCGG TTATC CCGGCGTAAACCTGCTG ATTATAAAAGATAAT TERM 3462 2639571 - 2639605 + G 70 -10.7 -2.8294 | opp_overlap 2639571 2639568 2639567, overlap 2639556 2639569 2639568 2639604 TCGCTGGATAAGCCA GCAAGTTGATGCCGG TTATC CCGGCGTAAACCTGC TGATTATAAAAGATA TERM 3463 2639635 - 2639617 - g 70 -4.6 -4.46212 | opp_overlap 2639605 2639604 CTGCTGATTATAAAA GATAATCA GAT TGTTTATC GCAAAGCCTGGGGCG EcSMS35_2585 2639425 - 2640726 + | beta-lactamase TERM 3464 2640760 - 2640733 - T 100 -11.3 -5.16071 | opp_overlap 2640733 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGTT ACTGGCTGGCC TTTAATCAATGAATC TERM 3465 2640733 - 2640760 + T 100 -13.5 -3.767 | opp_overlap 2640733 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGTT ACTGGCTGGCC TTTAATCAATGAATC EcSMS35_2586 2641683 - 2640784 - | dyp-type peroxidase family protein TERM 3466 2640830 - 2640840 + g 72 -8.2 -3.72576 | GCAAAGTAATAGCCG CCGG TTA CCGG TTTGGTGAAACGCAA TERM 3467 2641218 - 2641243 + g 74 -6 -4.54047 | opp_overlap 2641211 2641209, overlap 2641220 TGATAACAGCCACTT CGCGGCGCGT CTCTTC ACCCGCCGGG TTTTCTGTACCGTCA TERM 3468 2641702 - 2641726 + r 80 -10.8 -3.39289 | opp_overlap 2641705, overlap 2641705 TCCTCCTGAAAATAA TAATGCCACG CAATC CGTGGCATTG TTGTGCGCTATTTTA TERM 3469 2641705 - 2641723 + r 80 -10.3 -3.81848 | opp_overlap 2641705, overlap 2641702 TCCTGAAAATAATAA TGCCACG CAATC CGTGGCA TTGTTGTGCGCTATT TERM 3470 2641723 - 2641705 - R 85 -10.3 -4.20868 | opp_overlap 2641702 2641705 TCCTGAAAATAATAA TGCCACG CAATC CGTGGCA TTGTTGTGCGCTATT EcSMS35_2587 2642354 - 2641779 - | putative lipoprotein TERM 3471 2642126 - 2642106 - G 77 -3.1 -5.06451 | CATCACTTCAAAAAA GCGCACCAC GTT GCCGTTCGC GGTTTTCATTCCGCT EcSMS35_2588 2642762 - 2642415 - | putative inner membrane protein YfeZ TERM 3472 2642659 - 2642643 - G 75 -4.3 -4.75372 | overlap 2642645 ACCACTCAGCAAAAA TGCCAGC ACC GCCGGAA TACCGGGAATCAACC EcSMS35_2589 2643276 - 2642851 - | acetyltransferase TERM 3473 2644291 - 2644280 - g 72 -5.8 -4.36914 | overlap 2644281 CGTTTCGCCAGAAAA TCGC CACA GCGA TTGCCGAAGGCGTGA amiA 2643490 - 2644359 + | N-acetylmuramoyl-L-alanine amidase AmiA TERM 3474 2644587 - 2644633 + G 100 -13.9 -3.69323 | gap 2 GCCTGCTTCCGCCAC CGCTCATCGTC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCG TTTCACTGGTAGTGC hemF 2644363 - 2645262 + | coproporphyrinogen III oxidase, aerobic EcSMS35_2592 2646320 - 2645268 - | putative transcriptional regulator EutR TERM 3475 2645749 - 2645783 + g 70 -7.1 -4.02456 | gap 2, opp_overlap 2645769, overlap 2645777 2645779 TTCTCGCAAAATGTC GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC TTTATGCTGCTCTTT EcSMS35_2593 2646866 - 2646366 - | putative ethanolamine utilization protein EutK TERM 3476 2646414 - 2646446 + g 70 -4.8 -4.56597 | overlap 2646416 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCCAGCGGCCA EcSMS35_2594 2647538 - 2646879 - | putative ethanolamine utilization protein EutL eutC 2648435 - 2647548 - | ethanolamine ammonia-lyase, light chain TERM 3477 2648471 - 2648501 + r 75 -8.9 -3.62096 | gap 1, opp_overlap 2648468 TCAGAAGAACAGTGA CGGATCGCCCGCCC GTTT GGTCAGGCGA-CCG TTTGCCATAATGCCC eutB 2649817 - 2648456 - | ethanolamine ammonia-lyase, large subunit eutA 2651232 - 2649829 - | ethanolamine utilization protein EutA TERM 3478 2650904 - 2650886 - G 85 -8.8 -4.46212 | CTGGCGACGACAAAA TCGCCCAG CGA CTGGGAGA GCGTCATCACCGCCG eutH 2652455 - 2651229 - | ethanolamine utilization protein EutH TERM 3479 2652438 - 2652420 - G 74 -7.5 -4.12254 | opp_overlap 2652419 2652420 2652422 TATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC eutG 2653812 - 2652625 - | ethanolamine utilization protein EutG eutJ 2654638 - 2653802 - | ethanolamine utilization protein EutJ TERM 3480 2653992 - 2654013 + g 81 -4.3 -5.14563 | opp_overlap 2653992, overlap 2653997 CCCTGCCCTTCAATA TGCCGGGCG ACAA TGTCCGCCA TTTTTTCGTACACCG TERM 3481 2654371 - 2654345 - G 79 -10.1 -3.7331 | opp_overlap 2654363, overlap 2654343 ACCTGGAGGAAAAGA GGTCGCCGCAT GGCTA AAACGGCGACC GAATTGCTGCTCGAG TERM 3482 2654670 - 2654654 - R 71 -8.7 -3.55444 | overlap 2654657 CGGTTACTCCTTAAA CAATGCG AAA CGCATCG ACTAATACACAGCGA eutE 2656052 - 2654649 - | ethanolamine utilization protein EutE TERM 3483 2654713 - 2654678 - G 70 -9.8 -3.15699 | gap 2, opp_overlap 2654682, overlap 2654676 2654680 ACGCATCGACTAATA CACAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG-G TTACCCCTTCACCGG TERM 3484 2654712 - 2654680 - G 85 -13.5 -3.13867 | gap 1, opp_overlap 2654682, overlap 2654678 2654676 GCATCGACTAATACA CAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG GTTACCCCTTCACCG TERM 3485 2655330 - 2655362 + g 72 -6.2 -4.33803 | gap 1 TTCATCCACCACTAC CGGCGGGTTGCCAGC GCCT GC-GGCAATCAGACG TTTATTGGTGTGTTT TERM 3486 2655538 - 2655554 + g 71 -2.1 -5.00616 | overlap 2655539 TGGTTGAGCAGCGTA ATCGCCC GCT GGGAGAC TTTTTTCGCCGCCGG TERM 3487 2655669 - 2655684 + g 70 -6 -4.18494 | opp_overlap 2655668 CGTCACCGAAGCCAC CACGCC CCAG GGCGCG TTTTCAATCAGGGTC TERM 3488 2655757 - 2655771 + g 70 -3.5 -4.60924 | gap 1, opp_overlap 2655743, overlap 2655753 ACGCCTGGTGTGCCG CG-CGC CTGA GCGACG TTTTTGGCAAATTTA eutN 2656351 - 2656064 - | ethanolamine utilization protein TERM 3489 2656450 - 2656425 - R 70 -9 -3.15182 | overlap 2656423 ATGAAAAAGGAGAGA GCGTGACGCC CGAATC GACGTCACAC AGGGTGATTACAGGT eutM 2656751 - 2656458 - | ethanolamine utilization protein EutM TERM 3490 2656559 - 2656592 + g 71 -9.5 -3.55444 | gap 1 CCAGCTCGCCGATAC GCTGTG-CCGCTGCGG CAC CTGCATCGGTCGCGGC TTTACAGGCTGCAAC eutD 2657806 - 2656790 - | ethanolamine utilization protein EutD TERM 3491 2657766 - 2657755 - G 70 -3.6 -4.60041 | ACGCATCCGGAAAAA CCAC TCTG GCGG GCGCTCGCAACGCCA eutT 2658606 - 2657803 - | ethanolamine utilization cobalamin adenosyltransferase TERM 3492 2658456 - 2658445 - G 70 -5.8 -4.16842 | opp_overlap 2658448 TTCATCGTCAACAAA CAGG CGGC CCTG CTCGTCAATAAACTT EcSMS35_2606 2659304 - 2658603 - | ethanolamine utilization protein EutQ eutP 2659758 - 2659279 - | ethanolamine utilization protein, EutP TERM 3493 2659657 - 2659667 + g 71 -3.2 -4.82901 | CTTATCATTAAATTC CACG GCC TGTG TTTTTCTGGCGAGGG EcSMS35_2608 2660106 - 2659771 - | ethanolamine utilization protein EutS TERM 3494 2659919 - 2659904 - G 70 -5.4 -4.39002 | overlap 2659892 AAACGGTCGAGAAAA CCGATA TGCA CATCGG CAGCTTTCAGCGCTA TERM 3495 2659941 - 2659955 + g 90 -11.4 -3.86822 | opp_overlap 2659940 TCAGCGCTAAATCAC CGGCGA TCA TCGCCG TTTCTCCGGGAGTTA TERM 3496 2660382 - 2660353 - R 100 -15.1 -3.66378 | overlap 2660354 TATATTGCAGCTAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAAAAAGA TERM 3497 2660381 - 2660354 - R 100 -18.6 -2.79505 | overlap 2660353 ATATTGCAGCTAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAAAAAG maeB 2662678 - 2660399 - | malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) TERM 3498 2661472 - 2661451 - G 72 -10.1 -3.32769 | CGTCGAAATCAGCAA TCGGACGCG TCGC CACGCCCGA CTCCATCGCCGCTTT TERM 3499 2662117 - 2662127 + g 71 -3.2 -4.82901 | opp_overlap 2662106 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3500 2662742 - 2662714 - H 76 -6.1 -4.55697 | gap 1, opp_overlap 2662732 ACGTTCACAAATAAA GTGTGTGGGCAA CAGCCC CTGCCCACA-AC GTGGCGCACATTATT TERM 3501 2663433 - 2663479 + G 83 -10.3 -4.13654 | gap 1, opp_overlap 2663419 2663474, overlap 2663436 2663437 2663474 ACTGCAACCTGACGC TGCTGTTTTCTTTTGCACAGGC GCGG GCCTGTGCAGAAGCAGGC-GTA TTTCTGATTTCGCCG TERM 3502 2663436 - 2663477 + G 93 -13.1 -3.66216 | opp_overlap 2663419 2663474, overlap 2663433 2663437 2663474 GCAACCTGACGCTGC TGTTTTCTTTTGCACAGGC GCGG GCCTGTGCAGAAGCAGGCG TATTTCTGATTTCGC TERM 3503 2663437 - 2663476 + G 90 -14.4 -2.79007 | opp_overlap 2663474, overlap 2663436 2663433 2663474 CAACCTGACGCTGCT GTTTTCTTTTGCACAGGC GCGG GCCTGTGCAGAAGCAGGC GTATTTCTGATTTCG tal1 2662967 - 2663917 + | transaldolase tktB 2663937 - 2665940 + | transketolase TERM 3504 2666084 - 2666061 - T 90 -12.4 -3.35798 | opp_overlap 2666075 ACGGGTGATCCACAA CGTGGGCCAG GCGT CTGGCCCATG CCAGTTATCGCAGGT EcSMS35_2612 2667086 - 2666043 - | hypothetical protein TERM 3505 2667085 - 2667074 - G 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAG CGCA TGGACGGTACGACCC EcSMS35_2613 2667787 - 2667212 - | NUDIX family hydrolase TERM 3506 2667788 - 2667837 + r 80 -9.3 -4.03234 | overlap 2667789 GATTTGTTGCGTCAT ACCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGGG TTTGTCTGCGCAGGC TERM 3507 2667789 - 2667836 + r 83 -12.8 -3.01726 | overlap 2667788 ATTTGTTGCGTCATA CCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGG GTTTGTCTGCGCAGG aegA1 2669834 - 2667855 - | protein aegA TERM 3508 2669047 - 2669062 + g 71 -9 -3.52909 | opp_overlap 2669046, overlap 2669046 GTCTGGTGAGAAAGC TCGACG GCGG CGTCGA TGTTTCCTGCTTTCA TERM 3509 2670058 - 2670080 + G 72 -7.6 -3.91792 | opp_overlap 2670055, overlap 2670058 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3510 2670058 - 2670081 + G 100 -5.2 -5.55698 | gap 1, opp_overlap 2670055, overlap 2670058 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3511 2670757 - 2670747 - g 71 -3.2 -4.81212 | overlap 2670749 GTCAGTAGAAGAAAA GACC CGC GATC TCCACGAGGCCAAGC narQ 2670040 - 2671740 + | nitrate/nitrite sensor histidine kinase NarQ TERM 3512 2671963 - 2671982 + G 82 -2.8 -5.26875 | gap 1, overlap 2671965 2671966 GGCAATCCTGTTGTG TCTGACAGG TAC CCTGGC-GA TTTTTTCATTGCCCG TERM 3513 2673898 - 2673881 - g 70 -6.9 -4.11363 | AACAAGATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCGCCAGCAATT acrD 2671904 - 2675017 + | acriflavine resistance protein D TERM 3514 2675057 - 2675022 - f 85 -11.4 -3.53444 | opp_overlap 2675029, overlap 2675029 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCTAATG TGTCGCCTTTTTCA ACTTTCCGATTAAGA TERM 3515 2675050 - 2675029 - f 100 -7.3 -5.57396 | opp_overlap 2675029, overlap 2675022 ATAAGCAATAAAAAA GGCGACA TGCTAATG TGTCGCC TTTTTCAACTTTCCG TERM 3516 2675029 - 2675050 + F 89 -8.7 -4.70879 | opp_overlap 2675029 2675022 ATAAGCAATAAAAAA GGCGACATG CTAA TGTGTCGCC TTTTTCAACTTTCCG TERM 3517 2675068 - 2675092 + F 77 -11.5 -2.79609 | opp_overlap 2675071 2675074, overlap 2675067 2675065 2675071 2675074 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCGGGTTCTTG CTGTTTGTACTTTGT TERM 3518 2675071 - 2675089 + F 81 -11 -3.52009 | opp_overlap 2675071 2675074, overlap 2675068 2675067 2675065 2675074 CAACTTTCCGATTAA GAACCTGC TCA GCGGGTTC TTGCTGTTTGTACTT EcSMS35_2617 2675556 - 2675912 + | ArsC family protein dapE 2675916 - 2677043 + | succinyl-diaminopimelate desuccinylase EcSMS35_2619 2677071 - 2677271 + | hypothetical protein TERM 3519 2677317 - 2677272 - T 75 -9.8 -3.55973 | opp_overlap 2677279, overlap 2677268 2677277 CAACCGAAGAAGTAA GC-TAAGTGGCCGGATAAGGCG TTAA CGCCGCATCCGGCCA-TGATGC CTGATACAGTCTTAT TERM 3520 2677312 - 2677277 - T 100 -15.4 -3.26428 | opp_overlap 2677279, overlap 2677272 2677268 GAAGAAGTAAGCTAA GTGGCCGGATAAGGCG TTAA CGCCGCATCCGGCCAT GATGCCTGATACAGT EcSMS35_2620 2678050 - 2677352 - | alpha-beta hydrolase superfamily esterase EcSMS35_2621 2680139 - 2678124 - | hypothetical protein TERM 3521 2678273 - 2678283 + g 79 -4.6 -4.96848 | opp_overlap 2678268 TGGTACATAACTGCG CGTC ACT GGCG TTTTTCTGTAAACGC TERM 3522 2679750 - 2679739 - G 72 -5.8 -4.39002 | AAATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA EcSMS35_2622 2681017 - 2680154 - | hypothetical protein purC 2681898 - 2681185 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3523 2681249 - 2681285 + g 72 -5.7 -4.55295 | opp_overlap 2681262, overlap 2681245 2681251 ATCAGGCCACCGAGG CTCTGGCGGAAACGGTC TTT GTCCATTTTCTCCAGCG TTTCTTTGTCCCACA TERM 3524 2682080 - 2682107 + r 74 -4 -4.90266 | opp_overlap 2682084, overlap 2682082 2682084 CGTATCATATCAGAA AAAAGGGCCGGA TGAC TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3525 2682082 - 2682105 + r 70 -6.6 -4.07008 | opp_overlap 2682084, overlap 2682080 2682084 TATCATATCAGAAAA AAGGGCCGGA TGAC TCCAGCCCTG TATTTTTACTTGCTA TERM 3526 2682084 - 2682103 + r 75 -9.2 -3.61182 | opp_overlap 2682084, overlap 2682082 2682080 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC TERM 3527 2682103 - 2682084 - R 100 -11.4 -5.34555 | opp_overlap 2682082 2682080 2682084 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC EcSMS35_2624 2683145 - 2682111 - | NlpB/DapX family lipoprotein TERM 3528 2682285 - 2682303 + g 76 -11 -3.41878 | GCCCAGTTCCTGCCA GTCGCTGT CAG ACAGCGGC TTGTAAGTTACGGCC TERM 3529 2682734 - 2682762 + g 77 -6 -4.62069 | opp_overlap 2682715, overlap 2682737 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2684040 - 2683162 - | dihydrodipicolinate synthase gcvR 2684186 - 2684758 + | glycine cleavage system transcriptional repressor bcp 2684758 - 2685228 + | peroxiredoxin TERM 3530 2686039 - 2686027 - g 82 -2.6 -5.35815 | opp_overlap 2686030 CAGATGAAAGAAAAA CAGC GCCTT GCCG CAAGCTGGTTTGCCA TERM 3531 2686060 - 2686072 + G 73 -9.1 -3.6682 | TGGTTTGCCAATGGC GGGGA GGA TCCCC TTTCCCTCACTCAGG hyfA 2685481 - 2686098 + | hydrogenase-4 component A TERM 3532 2687253 - 2687235 - g 70 -6.6 -4.11216 | opp_overlap 2687236, overlap 2687236 2687239 GGGGCACTGGCAAAA CGGATGCC GTG GACAGCCG CAGCATGCCTGATTG hyfB 2686098 - 2688116 + | hydrogenase-4 component B TERM 3533 2688717 - 2688729 + G 72 -7.7 -3.95022 | CTGCTTCATTGAGAT GGGAA AAA TTCCC TTTGATGTTGCTGAA TERM 3534 2688977 - 2688992 + G 79 -2.4 -5.2189 | opp_overlap 2688975 CTATCGCAGAAAACA CGCTGG CACG CGGGCG TTTTTTACTCATTCA hyfC 2688127 - 2689074 + | hydrogenase-4 component C TERM 3535 2690251 - 2690263 + G 73 -9.1 -3.69283 | GATTACTGGCGTACC GCCGT TCA ACGGC TTCTTCAGTAAATTC TERM 3536 2690278 - 2690295 + G 71 -2.5 -4.93968 | CTTCTTCAGTAAATT CCCGCTG TTTG CTGCCGG TTTTTCGTTGTCAGT hyfD 2689091 - 2690530 + | hydrogenase-4 component D hyfE 2690542 - 2691192 + | hydrogenase-4 component E TERM 3537 2692087 - 2692099 + G 95 -9.1 -4.94972 | CGGCATGTTGTCGGT TGCCG TGG CGGCA TTTTTCATTCTGGTA TERM 3538 2692353 - 2692400 + G 77 -3.2 -5.06816 | overlap 2692344 CATTTACCGCCGTGC TGTTTGGCGGCGGTGCGCTGGC GCTG GCCGGGATGCCGCCCTTCAACA TTTTTCTTAGCGAAT EcSMS35_2633 2691197 - 2692777 + | hydrogenase-4, F subunit TERM 3539 2693636 - 2693650 + G 74 -2.8 -4.89562 | TCATTTGCTCAACCT TGGC CTCTCCT GCCA TTTTGTTGGTTTTGA EcSMS35_2634 2692767 - 2694482 + | hydrogenase-4, G subunit EcSMS35_2635 2694492 - 2695037 + | iron-sulfur cluster-binding protein EcSMS35_2636 2695034 - 2695792 + | hydrogenase-4, I subunit TERM 3540 2696185 - 2696163 - g 77 -11.3 -3.16055 | GAAATTGTGCAGGAA CCGGCCATC TATCT GATGGCCAG AAAAATTGCGTGAGA EcSMS35_2637 2695785 - 2696198 + | formate hydrogenlyase maturation protein HycH hyfR 2696228 - 2698240 + | hydrogenase-4 transcriptional regulator TERM 3541 2698332 - 2698307 - g 93 -10.5 -4.38712 | gap 1 TTGAGCGCCAGAAAA GCGGCAAT-CGC TGA ACGGATTGCCGC CCATAAAATTGCCCG fnt 2698262 - 2699110 + | formate/nitrite transporter TERM 3542 2699108 - 2699149 + T 83 -10.9 -3.64283 | opp_overlap 2699114, overlap 2699111 2699112 TTACGTCAGGAACCC TAAAAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGATTA TTCTTGCGCGATTTG TERM 3543 2699111 - 2699146 + T 72 -8.2 -3.94877 | opp_overlap 2699114, overlap 2699108 2699112 CGTCAGGAACCCTAA AAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGA TTATTCTTGCGCGAT TERM 3544 2699112 - 2699145 + T 80 -11.7 -2.96444 | opp_overlap 2699114, overlap 2699111 2699108 GTCAGGAACCCTAAA AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG ATTATTCTTGCGCGA TERM 3545 2699143 - 2699114 - T 100 -16.5 -4.67904 | opp_overlap 2699112 2699111 2699108 CAGGAACCCTAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA AGATTATTCTTGCGC EcSMS35_2640 2700208 - 2699147 - | PerM family permease TERM 3546 2700900 - 2700874 - g 100 -16.6 -3.07816 | opp_overlap 2700883 2700890, overlap 2700876 GCGCGAGCGATGGAA GATCAGCAGCGC AGC GCGCCGCTGACC TGGGTCGGCGCGTTA TERM 3547 2700898 - 2700876 - g 95 -15.6 -3.09878 | opp_overlap 2700883 2700890, overlap 2700874 GCGAGCGATGGAAGA TCAGCAGCGC AGC GCGCCGCTGA CCTGGGTCGGCGCGT EcSMS35_2641 2700421 - 2701884 + | M48 family peptidase TERM 3548 2702025 - 2701982 - g 75 -4.5 -4.86731 | overlap 2702019 CCTGCTGAAAGAAAA CGGCGTGGAGCCAGAA-GTGG TGCT CTACCTTCAGACACC-CGCCG ATGCGGCAACGCTGC arsC1 2701905 - 2702264 + | arsenate reductase hda 2703116 - 2702370 - | DnaA family protein Hda TERM 3549 2703126 - 2703168 + r 76 -7.7 -4.26393 | opp_overlap 2703122, overlap 2703132 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2704455 - 2703166 - | uracil permease TERM 3550 2703675 - 2703690 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3551 2704496 - 2704530 + rH 84 -4.3 -5.44198 | opp_overlap 2704504, overlap 2704499 2704504 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3552 2704499 - 2704527 + rH 80 -6 -4.74161 | opp_overlap 2704504, overlap 2704496 2704504 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3553 2704522 - 2704504 - RH 100 -11 -5.81412 | opp_overlap 2704504 2704499 2704496 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT TERM 3554 2704504 - 2704522 + rH 85 -10.3 -4.2711 | opp_overlap 2704504, overlap 2704499 2704496 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT upp 2705167 - 2704541 - | uracil phosphoribosyltransferase EcSMS35_2646 2705144 - 2705278 + | hypothetical protein purM 2705492 - 2706529 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 3555 2706670 - 2706639 - g 100 -13.7 -3.72027 | opp_overlap 2706665, overlap 2706636 AGTTTTCAGCAATAA GGCCGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3556 2706665 - 2706677 + G 72 -10.5 -3.02144 | opp_overlap 2706639 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACACATAC purN 2706529 - 2707167 + | phosphoribosylglycinamide formyltransferase TERM 3557 2707185 - 2707204 + F 95 -10.7 -4.74504 | opp_overlap 2707184 2707185 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3558 2707204 - 2707185 - f 74 -10.7 -2.78679 | opp_overlap 2707185, overlap 2707184 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3559 2709175 - 2709138 - g 70 -6.9 -4.10657 | overlap 2709139 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2707339 - 2709405 + | polyphosphate kinase TERM 3560 2709433 - 2709459 + G 74 -10.8 -3.23853 | overlap 2709431 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2709410 - 2710951 + | exopolyphosphatase TERM 3561 2710957 - 2710985 + T 100 -18.2 -3.6279 | CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT EcSMS35_2651 2713233 - 2710990 - | putative cytochrome C-type biogenesis protein TERM 3562 2712580 - 2712591 + g 87 -4.4 -5.19261 | TAATGCCAGTAGCCA GAGT GCGA ACTC TTTTTTGGTGACTTT TERM 3563 2713118 - 2713107 - G 82 -2.2 -5.32599 | overlap 2713099 GATAAAAGAGAAAAA CCTC ACCG GAAG AAATATGCGCGAAAG EcSMS35_2652 2713567 - 2713415 - | hypothetical protein EcSMS35_2653 2713585 - 2713776 + | hypothetical protein EcSMS35_2654 2714090 - 2714605 + | surface antigen family protein EcSMS35_2655 2714621 - 2715160 + | hypothetical protein TERM 3564 2715200 - 2715229 + T 90 -12.3 -3.41693 | opp_overlap 2715205, overlap 2715205 TGATTCGTGAGTATA AAAAACCCTCTGT AGTA ACAGAGGGTTTTG TTCATTCATAGTGCA TERM 3565 2715224 - 2715205 - T 100 -12.2 -5.31275 | opp_overlap 2715200 2715205 CGTGAGTATAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA TERM 3566 2715205 - 2715224 + T 100 -12.2 -4.80178 | opp_overlap 2715205, overlap 2715200 CGTGAGTATAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA guaA 2716832 - 2715255 - | GMP synthase (glutamine-hydrolyzing) TERM 3567 2716894 - 2716872 - R 100 -14.9 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA GTCGGGCGA AGAGAATCAGGAGCC guaB 2718436 - 2716901 - | inosine-5'-monophosphate dehydrogenase TERM 3568 2717819 - 2717833 + g 73 -4.2 -4.79667 | overlap 2717830 GTCATCAACCACCAG CGCCTT TTC AACGCG TTTTTCGTGCATTTT TERM 3569 2718089 - 2718103 + g 74 -2.8 -5.00616 | CTGCGGATCAGTTAC CACG CCAGATT CGTG TTTTTTCACACGGCG xseA 2718529 - 2719896 + | exodeoxyribonuclease VII, large subunit TERM 3570 2719916 - 2719891 - T 100 -12.7 -5.10497 | gap 1, opp_overlap 2719891 AAGCCACGTAAAAAA GCCTGATAGCGC GTT GCG-TATCAGGC TTTCGGAACCTCATA TERM 3571 2719891 - 2719916 + T 93 -12.7 -3.54741 | gap 1, opp_overlap 2719891 AAGCCACGTAAAAAA GCCTGATAGCGC GTT GCG-TATCAGGC TTTCGGAACCTCATA EcSMS35_2659 2728025 - 2719950 - | RatA-like protein TERM 3572 2720391 - 2720434 + g 100 -12.6 -4.57353 | gap 1, overlap 2720385 2720388 AATCGTGTCCAGCGT CGCCGTT-ATGGTGGCGTT ATCCGTC AGCGTCACCGTCAACGGCG TTTTATATCCTGGCG TERM 3573 2720652 - 2720673 + g 73 -9.3 -3.6692 | overlap 2720650 GATAAAAGCGATATT CGGCACCGG CTTC CCGGCGCTG TCTTTTACGGTAACG TERM 3574 2720695 - 2720708 + g 83 -5.2 -5.03314 | overlap 2720697 ACGGTAACGACAATG GGCG CGGCGT CGCC TTTTTTCACCGTCGC TERM 3575 2721523 - 2721536 + g 74 -2.4 -5.08824 | overlap 2721513 ACCGTTACCACAATC GGTA TTGAGT TACC TTTTTTCGCTGACGC TERM 3576 2723742 - 2723728 - G 72 -5.7 -4.57837 | ATATGTCCCCAAAAA TTCGC TTTTG GCGAA TCCGGGCTGGTCACG TERM 3577 2723794 - 2723807 + g 70 -6.7 -4.14243 | opp_overlap 2723771 GTTGCCTTGACGCTG CTGGA CGTA TCCAG TTTTGCCGTGAGATC TERM 3578 2724946 - 2724956 + g 74 -2.4 -5.055 | GTCACCTTAACCTGT AGCG TTT CGCC TTTTTTCAGCGTTGC TERM 3579 2725080 - 2725068 - G 70 -10.5 -2.8085 | opp_overlap 2725067 2725070, overlap 2725067 GCAACTGACGTAAAC CGGCG TAT CGCCG CCGATAGCTTGTGCG TERM 3580 2725239 - 2725270 + g 71 -10.8 -2.88023 | gap 1, overlap 2725238 CGCGCTTAGCTGGGA GCGAC-GCGGCAGCA TAT TGGTGCCGCAGCCGC CTTTGCTGGTACTGG TERM 3581 2725509 - 2725528 + g 72 -5.7 -4.56597 | CAGGTAGGAATTTAC CGGTGTT ACGCTC AGCACCG TTTTTAGCCCGACGC TERM 3582 2726532 - 2726547 + g 82 -3.2 -5.20333 | GAAGTAATAATACGC CAGCGG TTGA TCGTTG TTTTTATTGTCGGTG TERM 3583 2727367 - 2727379 + g 90 -9.1 -4.56597 | opp_overlap 2727374, overlap 2727338 2727337 GTCAGCGTGATAGTG CCACC AAC GGTGG TTTTTGCCGCCGCGA TERM 3584 2727831 - 2727810 - G 72 -5.1 -4.46212 | overlap 2727811 CGGTTTAGCAGAAAA CGCCACATC ATGA GATGCAGCA GGATCAAGCTGAACG TERM 3585 2728100 - 2728054 - R 100 -12.4 -5.02323 | opp_overlap 2728086 2728094, overlap 2728049 2728055 2728056 2728091 2728094 GCATGATAAACAAAA CGTCAACCCGTTTTGCTTAACG CGT CGCTAAGCAAAACAGGCGGAAA ACAGCATTCCCATAC TERM 3586 2728099 - 2728055 - R 100 -13.7 -3.60309 | opp_overlap 2728086 2728094, overlap 2728049 2728054 2728056 2728091 2728094 CATGATAAACAAAAC GTCAACCCGTTTTGCTTAACG CGT CGCTAAGCAAAACAGGCGGAA AACAGCATTCCCATA TERM 3587 2728098 - 2728056 - R 100 -17.2 -2.75101 | opp_overlap 2728086 2728094, overlap 2728049 2728055 2728054 2728091 2728094 ATGATAAACAAAACG TCAACCCGTTTTGCTTAACG CGT CGCTAAGCAAAACAGGCGGA AAACAGCATTCCCAT TERM 3588 2728136 - 2728091 - R 95 -11.9 -4.4078 | opp_overlap 2728086 2728094 2728102, overlap 2728056 2728055 2728054 2728094 2728102 CGTCGCTAAGCAAAA CAGGCGGAAAACAGCATTCCC ATAC GGGAATGCTGTTGTGCGCATT AGTGGTGTTTGTAAA TERM 3589 2728094 - 2728133 + r 100 -18 -2.58292 | opp_overlap 2728056 2728055 2728054 2728094 2728091 2728102, overlap 2728086 2728102 CGCTAAGCAAAACAG GCGGAAAACAGCATTCCC ATAC GGGAATGCTGTTGTGCGC ATTAGTGGTGTTTGT TERM 3590 2728133 - 2728094 - R 100 -18 -2.88268 | opp_overlap 2728086 2728094 2728102, overlap 2728056 2728055 2728054 2728091 2728102 CGCTAAGCAAAACAG GCGGAAAACAGCATTCCC ATAC GGGAATGCTGTTGTGCGC ATTAGTGGTGTTTGT TERM 3591 2728102 - 2728125 + r 100 -15.4 -3.33737 | opp_overlap 2728102 2728094 2728091, overlap 2728094 2728086 AAAACAGGCGGAAAA CAGCATTCCC ATAC GGGAATGCTG TTGTGCGCATTAGTG TERM 3592 2728125 - 2728102 - R 100 -15.4 -4.16146 | opp_overlap 2728094 2728086 2728102, overlap 2728094 2728091 AAAACAGGCGGAAAA CAGCATTCCC ATAC GGGAATGCTG TTGTGCGCATTAGTG EcSMS35_2660 2729127 - 2728135 - | putative adhesin EcSMS35_2661 2731357 - 2729183 - | putative adhesin TERM 3593 2729633 - 2729651 + g 81 -4.4 -5.11389 | GCCAGGCAATGTACT GGAGAGCG TAA CGGTCCCC TTTTCTTTATCTTGT TERM 3594 2730392 - 2730406 + g 81 -10 -3.87815 | opp_overlap 2730372 2730388 2730392 GCTGCCCATAAGCGA GTGAGC AGC GCTCAC TTTGTCAGGATCAAG TERM 3595 2731287 - 2731324 + g 95 -15.7 -3.07043 | opp_overlap 2731287 TCTTTATGCTCAACA TTTATCTCTGGAGCCGC AAAA GCAGCCCCAGAGATAAA TGTTAGCATAATACA TERM 3596 2731324 - 2731287 - G 100 -20.1 -3.04144 | opp_overlap 2731287 TCTTTATGCTCAACA TTTATCTCTGGAGCCGC AAAA GCAGCCCCAGAGATAAA TGTTAGCATAATACA TERM 3597 2731450 - 2731471 + r 73 -2.5 -5.06451 | gap 1, opp_overlap 2731440 2731450 2731453, overlap 2731440 2731453 GAAAGGATAAATATA TCA-TTATTT TTT AAATAAGTGA TTTTTTCCACTCATA TERM 3598 2731551 - 2731511 - R 73 -2.7 -5.1485 | opp_overlap 2731541, overlap 2731519 2731541 CAACTAATACAAAAA TGGCATAATCATCCATATT ATA AATATGAATGATAAAATCA TATATTTAAATGATA TERM 3599 2731543 - 2731519 - R 75 -9.5 -3.45155 | opp_overlap 2731541, overlap 2731511 2731541 ACAAAAATGGCATAA TCATCCATATT ATA AATATGAATGA TAAAATCATATATTT EcSMS35_2662 2731782 - 2731567 - | hypothetical protein TERM 3600 2731798 - 2731841 + r 72 -10.4 -2.89028 | opp_overlap 2731838, overlap 2731794 2731838 AAATACTCCTCGCGT GTTATTCGGTTTCCCTCTCC GTGT GGAAAGGGAAACCAGATAAG TGATTACTTACTTTT engA 2733317 - 2731845 - | GTP-binding protein EngA TERM 3601 2733415 - 2733384 - R 100 -13.8 -3.90048 | opp_overlap 2733390, overlap 2733385 2733390 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3602 2733414 - 2733385 - R 100 -17.3 -2.93708 | opp_overlap 2733390, overlap 2733384 2733390 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3603 2733390 - 2733409 + r 80 -9.2 -4.11216 | opp_overlap 2733390 2733385 2733384 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3604 2733409 - 2733390 - R 100 -11.4 -4.60746 | opp_overlap 2733390, overlap 2733385 2733384 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG EcSMS35_2664 2734613 - 2733435 - | outer membrane assembly lipoprotein YfgL TERM 3605 2733861 - 2733845 - G 78 -8.7 -4.18506 | overlap 2733857 CCAGCGCGAAAACAA CGCCGTT AAC AACGACG GGTGTCGTGTCAACA TERM 3606 2734017 - 2734006 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC EcSMS35_2665 2735244 - 2734624 - | hypothetical protein TERM 3607 2734787 - 2734805 + g 77 -8.2 -4.07687 | GCAGCCCACCCTTCA CCTTTGAT GGT ATCAAGGG TTTTCAGCGCGGCAT TERM 3608 2735056 - 2735068 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2736536 - 2735262 - | histidyl-tRNA synthetase TERM 3609 2736500 - 2736525 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3610 2736609 - 2736563 - R 73 -3 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCC TCAATGTTTC GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 3611 2736638 - 2736618 - R 86 -13.3 -3.00298 | opp_overlap 2736612 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2737765 - 2736647 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase EcSMS35_2668 2738802 - 2737792 - | helix-turn-helix DNA-binding domain-containing protein TERM 3612 2739082 - 2739045 - R 95 -12.2 -4.42653 | gap 1, overlap 2739047 ACTTCATTCATAAAA GATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT TERM 3613 2739080 - 2739047 - R 100 -14.8 -3.82117 | gap 1, overlap 2739045 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC EcSMS35_2669 2740241 - 2739087 - | radical SAM protein TERM 3614 2739466 - 2739454 - G 78 -10.5 -3.48593 | GATTTCTCCAGATAA CGGCG CAC CGCCG CAAGGAACGTTTCGA TERM 3615 2740330 - 2740299 - R 91 -8.7 -5.04249 | gap 2, opp_overlap 2740298 2740295 2740294, overlap 2740301 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT TERM 3616 2740327 - 2740301 - R 71 -10.1 -2.75795 | gap 1, opp_overlap 2740298 2740295 2740294, overlap 2740299 TTGAAAAAAGAAACG CCCCGG-TGAGC GGCT GCTCGTCCGGGG GCGCTGCATTGTACA ndk 2740822 - 2740391 - | nucleoside diphosphate kinase pbpC 2743283 - 2740971 - | penicillin-binding protein 1C TERM 3617 2741357 - 2741373 + g 76 -8 -4.25104 | opp_overlap 2741356 CCTGAGGGCAATCAG CGGCAA CACGT TTGCCG TTTTCATCCAGCCAG TERM 3618 2742259 - 2742246 - G 70 -3.8 -4.60949 | overlap 2742242 CAGACCATAAACAAA CGGT TTGAGC ACCG ATCCTGGCGATCGGA EcSMS35_2672 2748242 - 2743284 - | alpha-2-macroglobulin domain-containing protein TERM 3619 2743559 - 2743569 + g 72 -6.8 -4.19238 | overlap 2743543 2743542 TGGCGCTACCGTTCG CCAG ATT CTGG TTTTCCAGTTCCAGA TERM 3620 2744028 - 2744045 + g 74 -2.7 -4.87892 | ATTCAGCAAAGTGTT CTGCT CATCGGGT AGCAG TTTATTTTCTTCCAG TERM 3621 2744266 - 2744279 + g 70 -3.7 -4.72272 | CAGATTTCACGCAGC GCACC CAGT GGAGC TTTTTGCTGACGGGC TERM 3622 2745818 - 2745776 - G 95 -10.9 -4.46112 | gap 2 GCGTACTCAAATAAA GATCATGACGATTCCAGGT TTTATTT ACC-GGAATCGTCA-GATC CAGCCCTTGAGCCGG TERM 3623 2747176 - 2747196 + g 79 -3.9 -5.09245 | GTCTGACCGTTTTTA CGCGCCA GCAGTAA TGCCGCG TTTTTATCATTTTCC TERM 3624 2749159 - 2749187 + G 70 -3.7 -4.64676 | overlap 2749162 ACCGATTATCGTCAG CTGCGGCTCTGGT GTA ACGGCAGCCGTGG TTTTGTTGGCACTCG sseA 2748449 - 2749294 + | 3-mercaptopyruvate sulfurtransferase TERM 3625 2749303 - 2749346 + T 100 -18.4 -2.90194 | opp_overlap 2749305 2749310 2749317, overlap 2749306 2749310 2749317 GAAATAAGCTTTTAA CAGGCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 3626 2749344 - 2749305 - T 100 -16.7 -3.05066 | opp_overlap 2749303 2749306 2749310 2749317, overlap 2749310 2749317 AATAAGCTTTTAACA GGCAATAAAAAACCGCC GAATTT GGCGGTTTTTTATTGCT GGTCTGGTTCGCGGC TERM 3627 2749306 - 2749343 + T 100 -20.9 -2.69964 | opp_overlap 2749305 2749310 2749317, overlap 2749303 2749310 2749317 ATAAGCTTTTAACAG GCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGC TGGTCTGGTTCGCGG TERM 3628 2749339 - 2749310 - T 93 -13.8 -3.1855 | opp_overlap 2749306 2749303 2749310 2749317, overlap 2749305 2749317 GCTTTTAACAGGCAA TAAAAAACCGCC GAATTT GGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3629 2749310 - 2749339 + T 95 -14.5 -3.26433 | opp_overlap 2749310 2749305 2749317, overlap 2749306 2749303 2749317 GCTTTTAACAGGCAA TAAAAAACCGCCG AATT TGGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3630 2749332 - 2749317 - T 100 -7.5 -5.49234 | opp_overlap 2749310 2749306 2749303 2749317, overlap 2749310 2749305 ACAGGCAATAAAAAA CCGCC GAATTT GGCGG TTTTTTATTGCTGGT TERM 3631 2749317 - 2749332 + T 100 -8.2 -5.52023 | opp_overlap 2749317 2749310 2749305, overlap 2749310 2749306 2749303 ACAGGCAATAAAAAA CCGCCG AATT TGGCGG TTTTTTATTGCTGGT TERM 3632 2749716 - 2749702 - T 91 -11.4 -4.10744 | opp_overlap 2749696 2749692 2749713 CGAGGTAAATAATAA CCGGAG TCT CTCCGG TAACAATTTATTGGT TERM 3633 2749765 - 2749788 + T 100 -12.4 -4.3208 | opp_overlap 2749760, overlap 2749767 CAGCAGGTAAGCCCG AATGCCGCCC TTTG GGGCGGCATA TTTTAGATTATCCGG TERM 3634 2749767 - 2749786 + T 100 -15 -3.76167 | opp_overlap 2749760, overlap 2749765 GCAGGTAAGCCCGAA TGCCGCCC TTTG GGGCGGCA TATTTTAGATTATCC sseB 2750567 - 2749791 - | sseB protein TERM 3635 2750296 - 2750325 + g 83 -13 -3.02263 | opp_overlap 2750293, overlap 2750300 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCGCCTGT pepB 2751992 - 2750709 - | peptidase B TERM 3636 2750865 - 2750844 - G 70 -6.5 -4.16284 | gap 1, overlap 2750845 2750856 ATAGTTCTCAACAAA GTGCGACAGG AAG CCCGCCGC-C GTGCTCGCGCCTGCC TERM 3637 2752045 - 2752024 - R 100 -13.7 -4.4261 | opp_overlap 2752024 CGTTTAACAGCAAAA CGGGCTACC CTCA GGCAGCCCG TTCATTCACTCGGCT TERM 3638 2752024 - 2752045 + r 83 -11.5 -3.37522 | opp_overlap 2752024 CGTTTAACAGCAAAA CGGGCTACC CTCA GGCAGCCCG TTCATTCACTCGGCT iscX 2752251 - 2752051 - | FeS assembly protein IscX fdx 2752598 - 2752263 - | ferredoxin, 2Fe-2S type, ISC system hscA 2754450 - 2752600 - | Fe-S protein assembly chaperone HscA TERM 3639 2753931 - 2753943 + g 76 -9.1 -3.74693 | CATGCAACCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2754982 - 2754467 - | Fe-S protein assembly co-chaperone HscB EcSMS35_2680 2755106 - 2754990 - | hypothetical protein TERM 3640 2755062 - 2755036 - GR 89 -8.7 -4.6951 | gap 1, opp_overlap 2755036 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2755401 - 2755078 - | iron-sulfur cluster assembly protein IscA iscU 2755804 - 2755418 - | FeS cluster assembly scaffold IscU TERM 3641 2755769 - 2755749 - G 83 -9.7 -4.07568 | opp_overlap 2755753, overlap 2755752 2755756 TCGTTGTTGTCAAAA GAACCCACG TTA CGCGGATTC TCGTAATGGTCGATA iscS 2757046 - 2755832 - | cysteine desulfurase IscS iscR 2757646 - 2757158 - | iron-sulfur cluster assembly transcription factor IscR TERM 3642 2757542 - 2757532 - G 75 -6.8 -4.38927 | GTTCCAGATAAGAAA GGGA AAT TCCC TGACGTTCGGAAATA TERM 3643 2757669 - 2757681 + r 100 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3644 2757731 - 2757778 + r 72 -8.6 -3.6715 | overlap 2757733 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 3645 2757733 - 2757776 + r 83 -11.2 -3.4149 | overlap 2757731 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT TERM 3646 2757908 - 2757876 - R 80 -10.6 -3.35679 | TCCGTGCACTTACAA GCCTGATAAGACGC GTTAA GCATCACATCAGGC AACCACTGTTATTCG EcSMS35_2685 2758657 - 2757917 - | RNA methyltransferase TERM 3647 2758336 - 2758324 - G 71 -3.3 -4.77036 | opp_overlap 2758328, overlap 2758328 GCTCACGACCAAAAA CCAGC GCC ACCGG GGTATTTGCCGCTTC TERM 3648 2758541 - 2758578 + g 76 -7.9 -4.25104 | gap 1, overlap 2758531 2758544 GGAGTCAGGTTTCAC CAGT-GGATTAACCAGCC ACA GATTGGTTAATCCCATTG TTTTCATGGCACGGG TERM 3649 2758544 - 2758575 + g 70 -6 -4.25256 | gap 1, overlap 2758541 GTCAGGTTTCACCAG T-GGATTAACCAGCC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 3650 2758794 - 2758822 + G 79 -12.3 -3.02166 | opp_overlap 2758795, overlap 2758790 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 3651 2758821 - 2758795 - g 87 -13.6 -3.04263 | opp_overlap 2758794 2758790 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2758776 - 2759579 + | inositol-1-monophosphatase EcSMS35_2687 2759724 - 2760578 + | hypothetical protein csiE 2760769 - 2762049 + | stationary phase inducible protein CsiE hcaT 2763180 - 2762041 - | 3-phenylpropionic acid transporter TERM 3652 2762586 - 2762563 - G 72 -7.4 -3.9009 | overlap 2762564 AACGCAGGCCAGAAA GCGCCAGTTC TGGC GAACCAACGC CAACCACGCAGACCA TERM 3653 2763313 - 2763302 - R 74 -2.2 -5.22794 | gap 1, opp_overlap 2763303, overlap 2763303 ACAAGCACTAAAAAA CTGCG ATC CGC-G ACGCATGTTGCAAAA hcaR 2764233 - 2763340 - | hca operon transcriptional activator hcaE 2764366 - 2765727 + | 3-phenylpropionate dioxygenase alpha subunit hcaF 2765724 - 2766242 + | 3-phenylpropionate dioxygenase beta subunit TERM 3654 2766417 - 2766444 + G 75 -5.5 -4.65895 | gap 1, opp_overlap 2766412, overlap 2766417 2766418 TGGAAGATGACGCCA C-GGTGGAGTGC CCGCT GCACGCCGCCAG TTTTTGCCTGAAAAC hcaC 2766242 - 2766562 + | 3-phenylpropionate dioxygenase ferredoxin subunit TERM 3655 2767012 - 2766990 - g 77 -10.4 -3.59262 | overlap 2766991 TTTCACACTGTCAAA TGCCGCCTGG TAT CCCGGCGGCG GTGGCCCGCTGTACA TERM 3656 2767011 - 2766991 - g 85 -13.9 -2.75343 | overlap 2766990 TTCACACTGTCAAAT GCCGCCTGG TAT CCCGGCGGC GGTGGCCCGCTGTAC hcaB 2766559 - 2767371 + | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase TERM 3657 2767709 - 2767728 + G 76 -10.7 -3.40371 | opp_overlap 2767703 2767704 TTATAGCAACCGGCG CGGCAGC CAGACC GCTGCCG TTGCTTGATGCACTG hcaD 2767381 - 2768583 + | 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component EcSMS35_2696 2768680 - 2769102 + | putative inner membrane protein YphA TERM 3658 2769142 - 2769107 - T 93 -11.8 -3.72695 | opp_overlap 2769109, overlap 2769109 ATCGGCGTTAGGAAA GATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATT TTATAAATTACAGTA TERM 3659 2769109 - 2769140 + T 100 -16.6 -4.4715 | opp_overlap 2769107 2769109 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG TERM 3660 2769140 - 2769109 - T 100 -14.4 -3.44848 | opp_overlap 2769109, overlap 2769107 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG EcSMS35_2697 2770022 - 2769150 - | aldose 1-epimerase family protein EcSMS35_2698 2771128 - 2770034 - | zinc-binding dehydrogenase family oxidoreductase EcSMS35_2699 2772159 - 2771161 - | putative sugar ABC transporter, permease protein EcSMS35_2700 2773695 - 2772184 - | putative sugar ABC transporter, ATP-binding protein TERM 3661 2772648 - 2772661 + g 70 -5.2 -4.4195 | overlap 2772635 GCCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAT EcSMS35_2701 2774701 - 2773718 - | putative sugar ABC transporter, periplasmic sugar-binding protein EcSMS35_2702 2778079 - 2774798 - | TPR repeat-containing protein TERM 3662 2776475 - 2776487 + g 95 -9.1 -5.06414 | AATCAAACTGGCCTG TCCGC ACT GCGGA TTTTTGTTCAGCGCA EcSMS35_2703 2778197 - 2779390 + | ROK family protein TERM 3663 2779410 - 2779427 + T 100 -11.3 -5.01732 | opp_overlap 2779410 GCAATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT TERM 3664 2779427 - 2779410 - T 91 -11.3 -4.02253 | opp_overlap 2779410 GCAATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT glyA 2780707 - 2779454 - | serine hydroxymethyltransferase TERM 3665 2780193 - 2780209 + g 70 -5.1 -4.40333 | opp_overlap 2780193 TATGCAGAGAAGCCA CCGATAA TCA TTTTCGG TTTGTGTTCTTTGGC TERM 3666 2781476 - 2781460 - g 72 -5.7 -4.50661 | overlap 2781462 2781471 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GCTGGGAAGGTACTC hmp 2781035 - 2782225 + | flavohemoprotein glnB 2782608 - 2782270 - | nitrogen regulatory protein P-II 1 EcSMS35_2707 2784003 - 2782669 - | sigma-54 dependent response regulator TERM 3667 2783603 - 2783633 + g 70 -11 -2.76815 | opp_overlap 2783598, overlap 2783580 2783579 2783602 2783619 CGGGTGACAATCGCC TCGCGCCAGCGTTC GTC GGTGGCTGGCGCGG ATTGTTCCAGCGCAT EcSMS35_2708 2784706 - 2783993 - | putative lipoprotein EcSMS35_2709 2786298 - 2784871 - | sensor histidine kinase TERM 3668 2785501 - 2785511 + g 71 -2.4 -4.90266 | overlap 2785499 GCCCTCGCGCATACT CGCC AGC GGGG TTTTTAATTCATGAG TERM 3669 2786386 - 2786356 - R 100 -16.3 -2.91681 | opp_overlap 2786359 2786363, overlap 2786359 2786363 GGGGAAGTTCAGATA CAACAAAGCCGGG AATGA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3670 2786359 - 2786383 + r 100 -15.8 -3.32844 | opp_overlap 2786359 2786356 2786363, overlap 2786363 GAAGTTCAGATACAA CAAAGCCGGG AATGA CCCGGCTTTG TTATGGAATAAGGCG TERM 3671 2786383 - 2786359 - R 100 -15.8 -3.60412 | opp_overlap 2786359 2786363, overlap 2786356 2786363 GAAGTTCAGATACAA CAAAGCCGGG AATGA CCCGGCTTTG TTATGGAATAAGGCG TERM 3672 2786379 - 2786363 - R 90 -10.8 -4.42974 | opp_overlap 2786359 2786363, overlap 2786359 2786356 TTCAGATACAACAAA GCCGGG AATGA CCCGGC TTTGTTATGGAATAA TERM 3673 2786363 - 2786379 + r 90 -10.8 -4.32177 | opp_overlap 2786363 2786359 2786356, overlap 2786359 TTCAGATACAACAAA GCCGGG AATGA CCCGGC TTTGTTATGGAATAA TERM 3674 2786738 - 2786719 - R 74 -10 -3.15252 | AAATCAATCAGTTAA GTGTCGCC AGAA AGCGACAC GGTAAACCACCCATT TERM 3675 2786778 - 2786795 + r 71 -9.1 -3.41527 | opp_overlap 2786778 TACAGACACAAAAAA GCTCCCG AAGT TGGGAGC TTATAATAGCGGTTG TERM 3676 2786795 - 2786778 - R 100 -8.4 -5.4492 | opp_overlap 2786778 TACAGACACAAAAAA GCTCCC GAAGTT GGGAGC TTATAATAGCGGTTG purL 2790762 - 2786875 - | phosphoribosylformylglycinamidine synthase TERM 3677 2788900 - 2788910 + g 70 -6.8 -4.05446 | CAGCGCATCACCCTT CGCT TTC AGCG TTTGTACTTCGCGGG TERM 3678 2789566 - 2789577 + g 74 -2.2 -5.14163 | overlap 2789560 2789559 CAGCTCTTCGCCATT GTGG CTGT TCAC TTTTTCTTCATAGGT TERM 3679 2790878 - 2790867 - H 73 -4.4 -4.86731 | TGCGTGGAAATAAAA TCAC CATC GTGA ATTAGCAACGCGTGC TERM 3680 2791041 - 2791031 - g 79 -2.6 -5.1848 | opp_overlap 2791031 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG EcSMS35_2712 2791022 - 2792578 + | putative transglycosylase tadA 2793078 - 2792575 - | tRNA-specific adenosine deaminase yhfB 2793771 - 2793136 - | HAD hydrolase YhfB TERM 3681 2793402 - 2793387 - G 74 -6.1 -4.46112 | overlap 2793399 GCGTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 3682 2793587 - 2793606 + g 70 -5.6 -4.42386 | gap 1, opp_overlap 2793576 AGAAGCAGACTCATC GGCC-AGCG TGC CGCACGGCC TTTTATCAATAACGC TERM 3683 2793767 - 2793745 - G 86 -6.2 -5.16572 | overlap 2793748 2793750 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT TERM 3684 2794717 - 2794685 - g 72 -7.7 -3.94877 | opp_overlap 2794703 ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCGCAGGGAATGTTA EcSMS35_2714 2793980 - 2794828 + | RpiR family transcriptional regulator EcSMS35_2715 2794860 - 2795144 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3685 2795318 - 2795289 - T 100 -13.6 -3.78022 | opp_overlap 2795289 TTTATAGTTATTAAA GGCGCGTCCGAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT TERM 3686 2795823 - 2795771 - T 85 -10 -4.26881 | opp_overlap 2795779 2795785, overlap 2795772 2795779 2795785 CTGCACAAAATTAAA GTTGTAAAGTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTACTTTATAAA GAGAACGGTATTTTT TERM 3687 2795822 - 2795772 - T 93 -13.5 -3.15405 | opp_overlap 2795779 2795785, overlap 2795771 2795779 2795785 TGCACAAAATTAAAG TTGTAAAGTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTACTTTATAA AGAGAACGGTATTTT TERM 3688 2795815 - 2795779 - T 87 -11.6 -3.65084 | opp_overlap 2795779 2795785, overlap 2795772 2795771 2795785 AATTAAAGTTGTAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTATAAAGAGAACG TERM 3689 2795779 - 2795815 + T 85 -10.9 -3.85698 | opp_overlap 2795779 2795772 2795771 2795785, overlap 2795785 AATTAAAGTTGTAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTATAAAGAGAACG TERM 3690 2795809 - 2795785 - T 71 -4.8 -4.55128 | opp_overlap 2795779 2795785, overlap 2795779 2795772 2795771 AGTTGTAAAGTAAAA CCCCCGTTCC TTACC AGTTCGGGGG TTTTACTTTATAAAG acpS 2796219 - 2795839 - | holo-(acyl-carrier-protein) synthase TERM 3691 2796095 - 2796077 - G 78 -7.4 -4.36914 | opp_overlap 2796077 CGCTTCGCCAGAAAA CGCACC GGCTGGT GGTGCG TTTTCCAGATTGCCC TERM 3692 2796077 - 2796095 + g 74 -8.1 -4.14392 | opp_overlap 2796077 CGCTTCGCCAGAAAA CGCACCG GCTGG TGGTGCG TTTTCCAGATTGCCC pdxJ 2796950 - 2796219 - | pyridoxine 5'-phosphate synthase recO 2797690 - 2796962 - | DNA repair protein RecO TERM 3693 2797113 - 2797123 + g 72 -6.8 -4.21275 | overlap 2797095 2797094 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2798607 - 2797702 - | GTP-binding protein Era TERM 3694 2798046 - 2798036 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC rnc 2799284 - 2798604 - | ribonuclease III TERM 3695 2799543 - 2799511 - R 100 -21.5 -4.07877 | opp_overlap 2799499 TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGGCTATT lepB 2800531 - 2799557 - | signal peptidase I TERM 3696 2800093 - 2800109 + g 76 -9.5 -3.76373 | overlap 2800071 GTAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2802346 - 2800547 - | GTP-binding protein LepA TERM 3697 2800645 - 2800658 + g 74 -2.3 -5.07486 | overlap 2800643 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGGCTG TERM 3698 2802550 - 2802533 - R 93 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2803022 - 2802543 - | sigma-E factor regulatory protein RseC rseB 2803975 - 2803019 - | sigma-E factor regulatory protein RseB TERM 3699 2803916 - 2803889 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 2804625 - 2803975 - | sigma-E factor negative regulatory protein TERM 3700 2804351 - 2804363 + g 78 -7.7 -4.43189 | opp_overlap 2804359, overlap 2804359 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTCTGCCATTGAT rpoE 2805233 - 2804658 - | RNA polymerase sigma-E factor TERM 3701 2805664 - 2805642 - g 84 -3.5 -5.20222 | opp_overlap 2805663 ATTAAACAAAGAAAA TGAATACTC TCCCT GAACATTCA TGTGACGTGTTGATT TERM 3702 2805788 - 2805808 + G 72 -8.9 -3.73775 | overlap 2805791 TCAACATTTTATGCC CAGGGCGGT ATA GCCGCCGTG TTTGATGAGACTGAC nadB 2805641 - 2807263 + | L-aspartate oxidase TERM 3703 2807280 - 2807267 - T 74 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA EcSMS35_2727 2807985 - 2807248 - | putative methyltransferase TERM 3704 2807364 - 2807338 - G 88 -12.4 -3.58269 | overlap 2807362 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 3705 2808023 - 2808010 - H 74 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 3706 2808554 - 2808543 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT srmB 2808117 - 2809451 + | ATP-dependent RNA helicase SrmB TERM 3707 2809455 - 2809480 + T 91 -9.7 -4.82901 | opp_overlap 2809453, overlap 2809458 ACAGAAGAGTAATCT CAATGCCGGGT TTAA GCCCGGCATTA TTTTTATCCCGGCAA TERM 3708 2809458 - 2809477 + T 100 -11.4 -4.52873 | opp_overlap 2809453, overlap 2809455 GAAGAGTAATCTCAA TGCCGGGT TTAA GCCCGGCA TTATTTTTATCCCGG EcSMS35_2730 2810365 - 2809484 - | LysR family transcriptional regulator TERM 3709 2810167 - 2810177 + g 79 -2.4 -5.26875 | TGAGTTCATAGATGT GCGG CAG CAGC TTTTTTCCTTCGCGG TERM 3710 2810279 - 2810293 + g 70 -5 -4.57569 | overlap 2810282 AAAAGTCACCGTCGA TTGTGT GCA GCACAA TTTTTGCGAAGCTCG TERM 3711 2810314 - 2810294 - G 80 -11.3 -3.40403 | TTGTGTGCAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC EcSMS35_2731 2810468 - 2811055 + | LysE family translocator protein TERM 3712 2811032 - 2811044 + T 73 -4.8 -4.70583 | CTGCTGCTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAATGAA TERM 3713 2811087 - 2811064 - T 100 -16.8 -5.30155 | opp_overlap 2811057 2811064 CTATTAATGAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 3714 2811064 - 2811087 + T 100 -16.8 -3.22884 | opp_overlap 2811064, overlap 2811057 CTATTAATGAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC grcA 2811493 - 2811110 - | autonomous glycyl radical cofactor TERM 3715 2811637 - 2811621 - H 74 -6.6 -4.31 | TTAAATCAATAGAAA CCACAT ATCGA ATGTGG TCACAAATGGATTTT TERM 3716 2812260 - 2812277 + G 88 -5.5 -5.18726 | AGCCTGATTAACCAG CATCGCG AAGG CGTGGTG TTTTTGTTGTGGGGA ung 2811798 - 2812487 + | uracil-DNA glycosylase TERM 3717 2812528 - 2812501 - T 100 -13.4 -4.0896 | opp_overlap 2812499 2812502 2812525 2812527, overlap 2812502 AAATTTGCGGGAAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 3718 2812502 - 2812527 + T 89 -14.7 -3.0169 | opp_overlap 2812501 2812502, overlap 2812499 2812525 AATTTGCGGGAAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 3719 2812527 - 2812502 - T 100 -16.9 -3.04894 | opp_overlap 2812502 2812499 2812525, overlap 2812501 AATTTGCGGGAAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT EcSMS35_2734 2813572 - 2812535 - | RNA methyltransferase TERM 3720 2813219 - 2813231 + g 70 -5.5 -4.42386 | overlap 2813200 2813220 ACGGCTCTGGAACAG TGCCT GAC AGGCG TTTTCTCCGTAGACG TERM 3721 2813371 - 2813359 - G 71 -9.1 -3.53012 | opp_overlap 2813339 CCGGCGCGCGGGAAA CCGTG CGC CACGG CGAATCTTCCCACTT EcSMS35_2735 2813779 - 2814198 + | putative thioredoxin TERM 3722 2814205 - 2814225 + F 100 -14.7 -4.50976 | TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 3723 2814300 - 2814325 + G 70 -3.9 -4.63218 | overlap 2814303 CTCCAGTTACGCGCC GAGCGTATTGC GCGC GCAACACGTCC TTTTCTTGCCCGCGG TERM 3724 2814480 - 2814464 - g 72 -10.1 -3.3782 | opp_overlap 2814463 2814461 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA EcSMS35_2736 2814267 - 2814965 + | DTW domain-containing protein TERM 3725 2815407 - 2815449 + G 70 -5.5 -4.42806 | overlap 2815392 2815403 CTGGCAAGGTCTGAA TGCCAGCTTTTCGCCTGTG CCGAT TAAACGCGGCAAGCTGGCG TTTATTTCGCAATCG EcSMS35_2737 2814997 - 2817657 + | CoA-binding domain/acetyltransferase domain-containing protein pssA 2817771 - 2819126 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 3726 2819149 - 2819133 - f 75 -9.4 -3.51032 | opp_overlap 2819133 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 3727 2819133 - 2819149 + F 93 -9.4 -5.04249 | opp_overlap 2819133 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG EcSMS35_2740 2819223 - 2819495 + | putative lipoprotein kgtP 2820790 - 2819492 - | alpha-ketoglutarate permease TERM 3728 2821098 - 2821079 - R 100 -13.6 -4.7629 | opp_overlap 2821079 GCACCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTCTGCTTAATTTGA TERM 3729 2821079 - 2821098 + r 100 -13.6 -3.58914 | opp_overlap 2821079 GCACCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTCTGCTTAATTTGA TERM 3730 2821245 - 2821266 + r 76 -8.7 -3.91196 | opp_overlap 2821236 GCAAATTCTGTTTCA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 3731 2822432 - 2822443 + r 71 -4.4 -4.7254 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTAATAAACAGT TERM 3732 2823734 - 2823746 + r 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3733 2824288 - 2824312 + r 72 -8 -3.93061 | gap 1, opp_overlap 2824294 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 3734 2824514 - 2824527 + r 74 -6.7 -4.41177 | overlap 2824479 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 3735 2826537 - 2826564 + r 82 -12.8 -2.96695 | opp_overlap 2826542, overlap 2826542 GTCTAACTTATAGAC AAAAACGAGCCC CGAA GGGCTCGTTTTA TCATTTACTGGACGG TERM 3736 2826559 - 2826542 - R 100 -12.7 -5.04597 | opp_overlap 2826537 2826542 ACTTATAGACAAAAA CGAGCCC CGAA GGGCTCG TTTTATCATTTACTG TERM 3737 2826542 - 2826559 + r 100 -12.7 -4.63172 | opp_overlap 2826542, overlap 2826537 ACTTATAGACAAAAA CGAGCCC CGAA GGGCTCG TTTTATCATTTACTG clpB 2829142 - 2826569 - | ATP-dependent chaperone protein ClpB TERM 3738 2828338 - 2828318 - G 72 -7.5 -3.86822 | opp_overlap 2828318 TAATTCGTCGATAAA CAGGATGAC GTT GCCTTCCTG TTTGGCAAGATCGTT EcSMS35_2747 2830003 - 2829272 - | hypothetical protein rluD 2830980 - 2830000 - | ribosomal large subunit pseudouridine synthase D TERM 3739 2831015 - 2831025 + H 72 -8.2 -3.8766 | ATCGTTGGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC TERM 3740 2831833 - 2831814 - g 70 -3.5 -4.66833 | overlap 2831817 2831824 2831825 2831827 GCGCAAGCTGAAAAA GTAGCGA AAATCA TCGCTGC AAACAGCAGCAATAC EcSMS35_2749 2831115 - 2831852 + | outer membrane assembly lipoprotein YfiO TERM 3741 2831906 - 2831859 - f 82 -4.8 -5.28561 | opp_overlap 2831873, overlap 2831868 2831873 AATACATAACAAAAA CCTGAAACACAAAACGGCAGCC CTTG AGCTGCCGTTTTTTTATTCTGT TAGTTGTGAAACTGA TERM 3742 2831897 - 2831868 - f 85 -11.5 -3.47713 | opp_overlap 2831873, overlap 2831859 2831873 CAAAAACCTGAAACA CAAAACGGCAGCC CTTG AGCTGCCGTTTTT TTATTCTGTTAGTTG TERM 3743 2831873 - 2831892 + F 100 -10.7 -5.94214 | opp_overlap 2831873 2831868 2831859 ACCTGAAACACAAAA CGGCAGC CCTTGA GCTGCCG TTTTTTTATTCTGTT TERM 3744 2831892 - 2831873 - f 100 -11.4 -4.79451 | opp_overlap 2831873, overlap 2831868 2831859 ACCTGAAACACAAAA CGGCAGCC CTTG AGCTGCCG TTTTTTTATTCTGTT TERM 3745 2832417 - 2832384 - g 72 -6.7 -4.1822 | gap 1, overlap 2832385 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG EcSMS35_2750 2832123 - 2832464 + | ribosomal subunit interface protein TERM 3746 2832490 - 2832505 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC TERM 3747 2832684 - 2832664 - f 82 -10.3 -4.03167 | opp_overlap 2832664 GAAGACGAACAATAA GGCCTCCCA AAT CGGGGGGCC TTTTTTATTGATAAC TERM 3748 2832664 - 2832684 + F 100 -11.8 -5.5112 | opp_overlap 2832664 GAAGACGAACAATAA GGCCTCCC AAATC GGGGGGCC TTTTTTATTGATAAC pheA 2832714 - 2833874 + | chorismate mutase/prephenate dehydratase TERM 3749 2833875 - 2833916 + T 72 -9.5 -3.17219 | opp_overlap 2833882, overlap 2833878 2833879 2833882 GTTGATCCAACCTGA TGAAAAAGTGCCGGATGAT GTGA ATCATCCGGCACTGGATTA TTACTGGCGATTGTC TERM 3750 2833878 - 2833913 + T 77 -9 -3.72592 | opp_overlap 2833882, overlap 2833875 2833879 2833882 GATCCAACCTGATGA AAAAGTGCCGGATGAT GTGA ATCATCCGGCACTGGA TTATTACTGGCGATT TERM 3751 2833879 - 2833912 + T 82 -12.5 -2.83073 | opp_overlap 2833882, overlap 2833878 2833875 2833882 ATCCAACCTGATGAA AAAGTGCCGGATGAT GTGA ATCATCCGGCACTGG ATTATTACTGGCGAT TERM 3752 2833882 - 2833909 + T 100 -18.6 -2.67428 | opp_overlap 2833882, overlap 2833879 2833878 2833875 CAACCTGATGAAAAA GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC TERM 3753 2833909 - 2833882 - T 100 -18.6 -4.74801 | opp_overlap 2833879 2833878 2833875 2833882 CAACCTGATGAAAAA GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC tyrA 2835038 - 2833917 - | chorismate mutase/prephenate dehydrogenase TERM 3754 2834212 - 2834226 + g 71 -2.8 -4.77165 | GAAAGCGCCAGAAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGG aroF 2836119 - 2835049 - | 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive EcSMS35_2754 2836329 - 2836694 + | putative lipoprotein EcSMS35_2755 2836844 - 2837362 + | hypothetical protein TERM 3755 2837934 - 2837924 - g 83 -5.4 -5.055 | overlap 2837927 TGAAGCGTTAAAAAA CATC ACC GATG TCGTACATGATGTGC EcSMS35_2756 2837355 - 2838578 + | GGDEF domain-containing protein EcSMS35_2757 2838594 - 2839076 + | OmpA family protein TERM 3756 2839122 - 2839101 - T 100 -11.5 -5.76633 | opp_overlap 2839101 2839119 2839121 TGATAGATAAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 2839500 - 2839153 - | ribosomal protein L19 trmD 2840309 - 2839542 - | tRNA (guanine-N1)-methyltransferase rimM 2840891 - 2840340 - | 16S rRNA processing protein RimM rpsP 2841155 - 2840907 - | ribosomal protein S16 TERM 3757 2841211 - 2841179 - R 90 -9.2 -4.63218 | gap 1, opp_overlap 2841182, overlap 2841182 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 3758 2841209 - 2841182 - R 95 -12 -4.43307 | opp_overlap 2841182, overlap 2841179 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 2842653 - 2841292 - | signal recognition particle protein TERM 3759 2841905 - 2841870 - G 70 -10.4 -3.16881 | gap 1, opp_overlap 2841870, overlap 2841872 CAGTGATGTGACGAA TAGACAGCGCCGCACCG CCG CGG-GCATCGCCGTCCA CTTTGGTCAACACTA TERM 3760 2841903 - 2841872 - G 74 -10.8 -3.14602 | gap 1, opp_overlap 2841870, overlap 2841870 GTGATGTGACGAATA GACAGCGCCGCACCG CCG CGG-GCATCGCCGTC CACTTTGGTCAACAC TERM 3761 2842914 - 2842900 - g 85 -2.7 -5.40072 | overlap 2842902 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC EcSMS35_2763 2842745 - 2843611 + | putative cytochrome C assembly protein TERM 3762 2844913 - 2844892 - g 82 -11.5 -3.53012 | GTTTTTCCTGTGAAA CCGCTACGC GAGA GCGTGGCGG AGTAACGCAATGGCG EcSMS35_2764 2843656 - 2844918 + | CBS/transporter associated domain-containing protein TERM 3763 2844925 - 2844942 + F 100 -11.3 -6.22802 | opp_overlap 2844924 GCGGAGTAACGCAAT GGCGAAC TCCG GTTCGCC TTTTTTTTTATCGCC TERM 3764 2845251 - 2845266 + G 70 -4 -4.63542 | gap 1, opp_overlap 2845251, overlap 2845254 CGATCTCGGAAATCA TGACCTG GCG CAGG-CA TTTTTACAGGTTCTG EcSMS35_2765 2845042 - 2845647 + | hypothetical protein TERM 3765 2845673 - 2845653 - T 100 -12.6 -5.53288 | opp_overlap 2845649 TTTAAGCTAAAAAAA TGGCCGAC TTCGC GTCGGCCA TCAGATATTTACTTC grpE 2846272 - 2845682 - | co-chaperone GrpE ppnK 2846395 - 2847273 + | NAD(+) kinase TERM 3766 2847364 - 2847354 - f 70 -5.4 -4.39166 | TTTCATACAGGAAAA CAAC TAT GTTG GCACAACTGACCATC recN 2847359 - 2849020 + | DNA repair protein RecN EcSMS35_2769 2849169 - 2849510 + | SmpA/OmlA family lipoprotein TERM 3767 2849558 - 2849542 - T 100 -12.3 -5.10077 | opp_overlap 2849542 AAAGAGGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT TERM 3768 2849542 - 2849558 + T 100 -12.3 -5.46276 | opp_overlap 2849542 AAAGAGGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT EcSMS35_2770 2849862 - 2849572 - | RnfH family protein TERM 3769 2849688 - 2849706 + g 74 -3 -4.96773 | overlap 2849690 CGCTCAGTTTGGCCG GACGGC TGTAAAT GCCGAC TTTGTTTTTAGTTAA EcSMS35_2771 2850328 - 2849852 - | polyketide cyclase/dehydrase family protein TERM 3770 2850851 - 2850839 - g 80 -5.5 -4.98531 | GGTGCAAAGTAAAAA TCGGC GTC GCCAA AGGTAAGAAACAGCA smpB 2850460 - 2850942 + | SsrA-binding protein TERM 3771 2851256 - 2851241 - T 74 -3.2 -5.08011 | overlap 2851243 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 3772 2851636 - 2851623 - T 71 -8.1 -3.75832 | AAAAGGATACGCAAA GGAGC CGCG GCTCC TGGTGATATGAAAGC TERM 3773 2851665 - 2851650 - T 80 -10.4 -3.83026 | opp_overlap 2851650 CCTGGTGATATGAAA GCCCAC AGAT GTGGGC TTTTTCGTTGATGGT TERM 3774 2851650 - 2851665 + T 93 -10.4 -4.90869 | opp_overlap 2851650 CCTGGTGATATGAAA GCCCAC AGAT GTGGGC TTTTTCGTTGATGGT EcSMS35_2773 2856377 - 2851680 - | hypothetical protein TERM 3775 2852630 - 2852651 + gT 70 -6.5 -4.26622 | overlap 2852631 2852642 2852643 GCGTTGGATCGGGAG TCGGGTCTG GTTT CGGATCCGG TTTTGGGTCTGGTTT TERM 3776 2853292 - 2853276 - GT 86 -12.3 -3.14132 | CCGTGGCGTCATTAA CGACAGG CTT CCTGTCG CGCCACTGACCGATG TERM 3777 2853446 - 2853456 + gT 72 -6.8 -4.27316 | CCTTTGTGGCGGAGT CCTG ACC CAGG TTTTGCATTGCACCA TERM 3778 2855611 - 2855629 + gT 74 -7.4 -4.1337 | TATACTCTTTGCTCA CCGCCATT TTT GATGGTGG TTGTTTCTACTGTGC EcSMS35_2774 2856432 - 2856313 - | hypothetical protein EcSMS35_2775 2857933 - 2857184 - | hypothetical protein TERM 3779 2859166 - 2859187 + H 100 -11.6 -5.03715 | opp_overlap 2859165 2859164 CACATGTAAGCAATT TGCCCGCT TGGCAT AGCGGGCA TTTTTTCCAGGTACT TERM 3780 2862205 - 2862217 + G 72 -6.9 -4.17048 | AATATCAATATTCCT GGGCG TAG CGCTC TTCTTTTAGGGAAAA EcSMS35_2778 2860012 - 2862264 + | alpha amylase family protein TERM 3781 2862270 - 2862307 + F 70 -7 -4.10552 | opp_overlap 2862270, overlap 2862273 2862274 2862275 2862277 CTATTTGTAATTTAA TGTTATATCTGCCCCG CTAAAA CGGGGCAGATAATATG TTTAGTTTACTAACG TERM 3782 2862273 - 2862305 + F 87 -11.5 -3.64541 | gap 1, opp_overlap 2862270, overlap 2862270 2862274 2862275 2862277 TTTGTAATTTAATGT TA-TATCTGCCCCG CTAAAA CGGGGCAGATAATA TGTTTAGTTTACTAA TERM 3783 2862274 - 2862303 + F 85 -12.2 -3.39117 | opp_overlap 2862270, overlap 2862273 2862270 2862275 2862277 TTGTAATTTAATGTT ATATCTGCCCCG CTAAAA CGGGGCAGATAA TATGTTTAGTTTACT TERM 3784 2862275 - 2862302 + F 93 -15.7 -2.62386 | opp_overlap 2862270, overlap 2862274 2862273 2862270 2862277 TGTAATTTAATGTTA TATCTGCCCCG CTAAAA CGGGGCAGATA ATATGTTTAGTTTAC TERM 3785 2862277 - 2862300 + F 87 -13.9 -2.83953 | opp_overlap 2862270, overlap 2862275 2862274 2862273 2862270 TAATTTAATGTTATA TCTGCCCCG CTAAAA CGGGGCAGA TAATATGTTTAGTTT TERM 3786 2863222 - 2863239 + G 71 -9.1 -3.53012 | TTCCGCCACCCGCTG GCGCGTC GCCC GATGCGC TTTGCCGCGCCGCCG EcSMS35_2779 2862601 - 2863578 + | protein CsiD TERM 3787 2864227 - 2864245 + G 70 -5.2 -4.38927 | opp_overlap 2864226, overlap 2864228 CCGGCTGGTGAAAAT GCTCGG CCTCGAA CCGGGC TTTATTATCTGCCCG TERM 3788 2864434 - 2864445 + G 70 -5.8 -4.15841 | opp_overlap 2864424 2864423 TAAACGCGAAGGCTA TCGC AAGC GCGA TTTCTCGTTTAGTGA EcSMS35_2780 2863598 - 2864866 + | FAD dependent oxidoreductase TERM 3789 2865394 - 2865446 + G 74 -9.9 -3.50393 | gap 3, opp_overlap 2865387 CCCGTAAAGCAGGTC CGGCG-CTGGC-GGCAGGCTGCA-CG ATGG TGCTGAAGCCCGCCAGTCAGACGCCG TTCTCTGCGCTGGCG gabD 2864889 - 2866337 + | succinate-semialdehyde dehydrogenase (NAD(P)(+)) gabT2 2866351 - 2867631 + | 4-aminobutyrate transaminase TERM 3790 2867661 - 2867700 + F 71 -8.6 -3.53811 | gap 1, opp_overlap 2867683 2867687 2867697, overlap 2867643 2867686 GGAGGCGACGCTTTG CGGCTTGTCCGGCCTACGA GAA TCC-AGGTCGGATAAGGCG TTTACGCCGCATCCG TERM 3791 2867718 - 2867687 - f 74 -10.8 -2.61548 | opp_overlap 2867661 2867686, overlap 2867683 2867697 GCCTACGAGAATCCA GGTCGGATAAGGCG TTTA CGCCGCATCCGACA ATCTGTACGTGAACA gabP 2867868 - 2869268 + | gamma-aminobutyrate permease TERM 3792 2869494 - 2869517 + G 70 -6.8 -4.07568 | gap 1, overlap 2869496 ATCGGGTGGCGTCTA TGTCAGAGCAG GAG CTGCTC-GATA TTTTCGACGCCCGCG TERM 3793 2869859 - 2869884 + G 73 -11.8 -2.56596 | opp_overlap 2869842, overlap 2869855 CTGACTGCGGCGGTA CTGGCGCGAG ATACCG CGCGCGCCAG TGAGTTAATGCGCCA csiR 2869289 - 2869951 + | gab operon transcriptional repressor CsiR EcSMS35_2785 2870401 - 2869952 - | phospholipid-binding protein TERM 3794 2869979 - 2870001 + g 88 -8.4 -4.63184 | overlap 2869976 2869980 2869996 AATACGCAACACTTG CCCCGGGTAA ATT TTATCCGGGC TTTTTAGCATCGGTT TERM 3795 2869980 - 2870000 + g 80 -11.9 -3.37188 | overlap 2869976 2869979 2869996 ATACGCAACACTTGC CCCGGGTAA ATT TTATCCGGG CTTTTTAGCATCGGT TERM 3796 2870017 - 2870031 + g 71 -2.8 -4.77567 | overlap 2870019 TTTTTAGCATCGGTT TATTCG CTT CGAAGA TTTTATTGTACAGAT TERM 3797 2870469 - 2870450 - R 90 -12.8 -3.29649 | AGTGTAGCAGAGGAA CGCGGCGC GTTA ACGCCGCG GGGGTGAGGACAGGT EcSMS35_2786 2870643 - 2870485 - | hypothetical protein TERM 3798 2870694 - 2870682 - H 76 -6.3 -4.58395 | CTCATTGTTTAAAAA GAGAT TTT ATCTC TTAAGCGTAGTAATT EcSMS35_2787 2870826 - 2871125 + | ArsR family transcriptional regulator EcSMS35_2788 2871135 - 2871659 + | putative inner membrane protein TERM 3799 2871702 - 2871663 - T 71 -9.2 -3.32268 | gap 1, opp_overlap 2871664, overlap 2871654 2871664 2871667 CAACGAGCTTGAGAA GCGACGCCGGACG-CGCCA TAG CGGCGGCATCCGGCCTCAG TAATTAGATCAGGAA TERM 3800 2871701 - 2871664 - T 81 -12.7 -2.59039 | gap 1, opp_overlap 2871664, overlap 2871663 2871667 AACGAGCTTGAGAAG CGACGCCGGACG-CGCCA TAG CGGCGGCATCCGGCCTCA GTAATTAGATCAGGA TERM 3801 2871698 - 2871667 - T 74 -10.8 -2.59748 | gap 1, opp_overlap 2871664, overlap 2871664 2871663 GAGCTTGAGAAGCGA CGCCGGACG-CGCCA TAG CGGCGGCATCCGGCC TCAGTAATTAGATCA stpA 2872110 - 2871706 - | H-NS histone family protein StpA TERM 3802 2871796 - 2871816 + g 81 -8.3 -4.32857 | GGTCCAGGTTTTAGT TTCACCGTT AAC ATCGGTGAA TTTATATTTCGCCGG TERM 3803 2871826 - 2871843 + g 83 -6.2 -5.00616 | overlap 2871825 GGTGAATTTATATTT CGCCGG ACGCGG CTGGCG TTTTTTACCAGCGCG TERM 3804 2872305 - 2872331 + H 85 -13 -2.71011 | opp_overlap 2872293, overlap 2872312 TAATTTCGGTTATTT GTGAGCAGAGCG GCG CTCTCTGCTCGC TAATTCCGCAAGCCT EcSMS35_2790 2872778 - 2873227 + | hypothetical protein TERM 3805 2873236 - 2873262 + T 89 -12.2 -3.68619 | overlap 2873238 AGCCTGACCCTTCTT TTCGCGACTGGC ATC GCCAGTCGCGTC TTTAACTGGCTTCGC TERM 3806 2873238 - 2873260 + T 100 -19.2 -3.42283 | overlap 2873236 CCTGACCCTTCTTTT CGCGACTGGC ATC GCCAGTCGCG TCTTTAACTGGCTTC EcSMS35_2791 2873608 - 2873264 - | hypothetical protein TERM 3807 2873430 - 2873440 + g 70 -5.4 -4.43681 | overlap 2873416 2873413 GGTTCAGCCAGTGTT GAAC TAC GTTC TTTTAATGTTGGATG EcSMS35_2792 2873760 - 2874089 + | hypothetical protein TERM 3808 2874121 - 2874141 + T 100 -16.9 -5.15969 | opp_overlap 2874111 AATACGCGTCTTTGA CCCCGAAGC CTG GCTTCGGGG TTTTTTAGCTTAAGG EcSMS35_2793 2875480 - 2874146 - | GntR family transcriptional regulator EcSMS35_2794 2875568 - 2875999 + | carboxymuconolactone decarboxylase family protein nrdH 2876208 - 2876453 + | glutaredoxin nrdI 2876450 - 2876860 + | nrdI protein TERM 3809 2878127 - 2878154 + GF 71 -8.4 -3.54129 | gap 1, overlap 2878127 ATTCCCCCGACTTTG CC-CGCACGGTAG AGA CTGCCGTACGCGG TTTAACGGCGGTGTC nrdE 2876833 - 2878977 + | ribonucleoside-diphosphate reductase, alpha subunit TERM 3810 2879384 - 2879370 - g 70 -3.5 -4.67982 | gap 1, overlap 2879371 2879372 CTGGAGTGAAGAAAA CGC-GC CGTT GCAGCG AAAAGCACAGATTAT nrdF 2878987 - 2879946 + | ribonucleoside-diphosphate reductase, beta subunit TERM 3811 2880061 - 2880085 + F 100 -7.2 -5.62219 | CTCTGTTGCATTATT CGCCTGAA ACCACAATA TTCAGGCG TTTTTTTGCTATCTT proV 2880302 - 2881504 + | glycine betaine/L-proline ABC transporter, ATP binding protein TERM 3812 2881716 - 2881729 + G 72 -6.7 -4.28018 | opp_overlap 2881707 ACTGAAGGGATCGAC TGGGT CGTT ACCCA TTTTCGTCCCGTCTT proW 2881497 - 2882561 + | glycine betaine/L-proline ABC transporter, permease protein TERM 3813 2882571 - 2882589 + F 90 -12.4 -3.31144 | AAGTAACTCTGCACT TGCCCGGT GAC GCCGGGCA TTATCACCCTGCCAA proX 2882619 - 2883611 + | glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein TERM 3814 2883603 - 2883591 - f 71 -9.1 -3.33696 | GGCTGGGTGAATGAA GCGCT GGC AGCGC AGAAGTAATTTTTAT TERM 3815 2883621 - 2883653 + F 75 -10.6 -2.87931 | gap 1 AAGTAATTTTTATTC G-GGCGGATAAGGCG TTTT TGCCTCATCCGCCGC TCTGTACACAATGCC EcSMS35_2802 2883664 - 2883810 + | hypothetical protein EcSMS35_2803 2883803 - 2884987 + | major facilitator family transporter TERM 3816 2885453 - 2885439 - g 77 -7 -4.4874 | opp_overlap 2885440, overlap 2885440 TGCAAAAATCGAAAA CCGCCC TGT GGGCGT TTGGCCTGACGGATG TERM 3817 2885440 - 2885452 + G 81 -10.5 -3.60098 | opp_overlap 2885439 2885440 GCAAAAATCGAAAAC CGCCC TGT GGGCG TTTGGCCTGACGGAT TERM 3818 2885452 - 2885440 - g 76 -10.5 -3.28159 | opp_overlap 2885440, overlap 2885439 GCAAAAATCGAAAAC CGCCC TGT GGGCG TTTGGCCTGACGGAT EcSMS35_2804 2885156 - 2885848 + | branched chain amino acid ABC transporter TERM 3819 2886075 - 2886085 + G 70 -6.8 -4.03234 | GTCGGCTTCGCGGTA CTGG GTG CCAG TTTCTATAAAACACG EcSMS35_2805 2885838 - 2886173 + | hypothetical protein mprA 2886264 - 2886794 + | transcriptional repressor MprA TERM 3820 2886842 - 2886865 + F 100 -12.5 -4.56597 | opp_overlap 2886841 2886840 2886838 2886858 AAAGAAAAAATGACT GGCCAGCAT CGCAAC ATGCTGGCC TTTTTGGCAAGCAGG TERM 3821 2887332 - 2887321 - g 86 -5.8 -5.03314 | TTGAGGTGCAAAAAA TCGC ACTC GCGA AAGCACAAAGCGACT emrA 2886921 - 2888093 + | multidrug resistance protein A emrB 2888110 - 2889648 + | multidrug resistance protein B TERM 3822 2889678 - 2889659 - T 88 -12.2 -3.50422 | opp_overlap 2889659, overlap 2889655 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT TERM 3823 2889659 - 2889678 + T 100 -12.2 -5.1848 | opp_overlap 2889655 2889659 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT luxS 2890227 - 2889712 - | S-ribosylhomocysteinase (LuxS) TERM 3824 2890346 - 2890363 + r 100 -11.3 -5.58522 | CAGAGATGAAATTTT GGCCACT CACG AGTGGCC TTTTTCTTTTCTGTC gshA 2891933 - 2890377 - | glutamate--cysteine ligase EcSMS35_2811 2892434 - 2892006 - | hypothetical protein EcSMS35_2812 2892997 - 2892431 - | HAD family hydrolase csrA 2894370 - 2894185 - | carbon storage regulator EcSMS35_2819 2894480 - 2894596 + | hypothetical protein alaS 2897235 - 2894605 - | alanyl-tRNA synthetase recX 2897864 - 2897364 - | regulatory protein RecX TERM 3825 2897918 - 2897889 - R 95 -8.5 -5.1925 | opp_overlap 2897895, overlap 2897890 2897895 TTACAACTTAAAAAA GCAAAAGGGCCGC AGAT GCGACCCTTGTGT ATCAAACAAGACGAT TERM 3826 2897917 - 2897890 - R 89 -12 -3.70465 | opp_overlap 2897895, overlap 2897889 2897895 TACAACTTAAAAAAG CAAAAGGGCCGC AGAT GCGACCCTTGTG TATCAAACAAGACGA TERM 3827 2897912 - 2897895 - R 91 -10.5 -4.86862 | opp_overlap 2897895, overlap 2897890 2897889 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA TERM 3828 2897895 - 2897912 + r 72 -8.3 -3.58726 | opp_overlap 2897895 2897890 2897889 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA recA 2898994 - 2897933 - | protein RecA EcSMS35_2823 2899571 - 2899074 - | competence/damage inducible protein CinA mltB 2900801 - 2899716 - | lytic murein transglycosylase B TERM 3829 2901272 - 2901285 + G 82 -8.1 -4.45771 | overlap 2901280 GTTACCTGCTGTTAC CGTGC ATTG GCACG TTTGTCTTTTGCAAT srlA 2901058 - 2901621 + | PTS system, glucitol/sorbitol-specific, IIC component TERM 3830 2901984 - 2901965 - g 79 -3.6 -5.093 | overlap 2901968 CGTAAAAGAAGAAAA CATCAC TGTAGTGG GTGATG CGACACCACAACCCT srlE 2901618 - 2902577 + | PTS system, glucitol/sorbitol-specific, IIB component srlB 2902588 - 2902959 + | PTS system, glucitol/sorbitol-specific, IIA component srlD 2902963 - 2903742 + | sorbitol-6-phosphate 2-dehydrogenase TERM 3831 2903774 - 2903747 - f 70 -9.2 -3.14564 | gap 1, overlap 2903749 TGATGTTCTGATCAA CAGCGGAGATCTT TTA AGGATCTCCGC-G CGACTAATAGAATGC TERM 3832 2903773 - 2903749 - f 91 -12.9 -3.13522 | overlap 2903747 ATGTTCTGATCAACA GCGGAGATCTT TTA AGGATCTCCGC GCGACTAATAGAATG gutM 2903848 - 2904207 + | glucitol operon activator protein srlR 2904274 - 2905047 + | glucitol operon repressor TERM 3833 2905241 - 2905252 + G 93 -5.8 -5.28176 | ACGCTTGCCAGCACC GGCA CTCC TGCC TTTTTTGTCCATCCG gutQ 2905040 - 2906005 + | gutQ protein norR 2907516 - 2906002 - | anaerobic nitric oxide reductase transcription regulator NorR TERM 3834 2906200 - 2906168 - G 78 -12.6 -2.90075 | TTTTGCTTAACGATA GGCACCGCCGCCGC TTCTG GCGGCGGCAACGTC ACCTCAGGAAAAGCA TERM 3835 2907802 - 2907788 - g 90 -7.8 -4.76963 | overlap 2907789 GTACAGAATATAAAA CGCTGC GCG GCAGCA GCTACAACAGCTACC TERM 3836 2907801 - 2907789 - g 71 -9.1 -3.45093 | overlap 2907788 TACAGAATATAAAAC GCTGC GCG GCAGC AGCTACAACAGCTAC norV 2907703 - 2909142 + | anaerobic nitric oxide reductase flavorubredoxin TERM 3837 2909447 - 2909471 + G 72 -7.8 -3.86015 | opp_overlap 2909448, overlap 2909448 GCAATACGACAAGTT AGTGCTGGCA ACCGG TGCCAGCGCC TTTGTCCCGCCAGTG TERM 3838 2909448 - 2909470 + G 75 -11.3 -2.91395 | opp_overlap 2909448, overlap 2909447 CAATACGACAAGTTA GTGCTGGCA ACCGG TGCCAGCGC CTTTGTCCCGCCAGT norW 2909139 - 2910272 + | nitric oxide reductase FlRd-NAD(+) reductase hypF 2912639 - 2910351 - | [NiFe] hydrogenase maturation protein HypF TERM 3839 2910938 - 2910924 - G 90 -11.4 -3.86346 | CCACTCCGGCACAAA GCGCAG GCA CTGCGC CAGCAGGTTACGCCA EcSMS35_2836 2913271 - 2912744 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein EcSMS35_2837 2913416 - 2913249 - | hypothetical protein TERM 3840 2913407 - 2913377 - G 90 -7.7 -4.77157 | gap 1, opp_overlap 2913380 2913401, overlap 2913378 2913380 GTAATGCAGGAAAAA CGATGTCATCGACA CTAG TGACGATGACAT-G TGATGACAATGTTTA TERM 3841 2913380 - 2913405 + g 70 -10.5 -2.79679 | opp_overlap 2913377 2913378 2913380, overlap 2913401 ATGCAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT TERM 3842 2913405 - 2913380 - G 76 -10.5 -3.28873 | opp_overlap 2913380 2913401, overlap 2913377 2913378 ATGCAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT ascG 2914472 - 2913420 - | transcriptional regulator AscG TERM 3843 2914064 - 2914034 - G 70 -9.8 -3.17688 | overlap 2914035 CAATGATGTCATCAA TTTCATCCACGCTT AAA AAGCGCGGATAAAT CATGATCGCGTCGCA TERM 3844 2914063 - 2914035 - G 80 -13.3 -2.50291 | overlap 2914034 AATGATGTCATCAAT TTCATCCACGCTT AAA AAGCGCGGATAAA TCATGATCGCGTCGC TERM 3845 2915238 - 2915261 + G 75 -5.2 -4.66318 | opp_overlap 2915220, overlap 2915224 2915240 GCTGGCGATTGCCAT CGCGGGTGTG CTGG TACATCCGAG TTTTATTGAACTGAT ascF 2914690 - 2916147 + | PTS system, arbutin-, cellobiose-, and salicin-specific, EIIBC component TERM 3846 2916933 - 2916944 + G 84 -3.6 -5.29782 | GCGTTGGAGAAAGAC CGGG AAAA CCTG TTTTTTATCGATGTG ascB 2916156 - 2917580 + | 6-phospho-beta-glucosidase TERM 3847 2917619 - 2917588 - T 70 -10 -2.5661 | opp_overlap 2917598 2917617, overlap 2917587 2917585 TAGAGTAAGTAACAT TGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACAAGGCCCGATAA TERM 3848 2917650 - 2917626 - T 79 -12.1 -2.57344 | opp_overlap 2917617, overlap 2917625 TATCCGGCCTACAAG GCCCGATAAGC GTT GCGCATCGGGC AATCTGGCGTTTGGC EcSMS35_2841 2918422 - 2917667 - | hypothetical protein TERM 3849 2917811 - 2917800 - G 77 -7.2 -4.48987 | GGGGTATAAGTAAAA CGCG TGAG CGCG GGATAGCTTAACTTG hycI 2918935 - 2918465 - | hydrogenase maturation peptidase HycI EcSMS35_2843 2919338 - 2918928 - | formate hydrogenlyase maturation protein hycG 2920102 - 2919335 - | formate hydrogenlyase, subunit G hycF 2920644 - 2920102 - | formate hydrogenlyase, subunit F TERM 3850 2920214 - 2920255 + g 76 -12.4 -2.59797 | gap 1, overlap 2920213 2920211 CGGTGGTTTTCCGCG CGGCTGTCGCCGTTGTGCT TAAGC AGCGCAATGGCG-TAGTCG ATCTCTTTCTGGACG hycE 2922384 - 2920654 - | formate hydrogenlyase, subunit E hycD 2923304 - 2922381 - | formate hydrogenlyase, subunit D hycC 2925133 - 2923307 - | formate hydrogenlyase, subunit C hycB 2925741 - 2925130 - | formate hydrogenlyase, subunit B TERM 3851 2925219 - 2925194 - G 74 -7.5 -4.08064 | opp_overlap 2925194 AAGTCCGTGTTAAAA GTCAGCTCACG CTTA CGTTTGCTGAC GCGGGCGATATCGGT TERM 3852 2925592 - 2925609 + g 71 -2.7 -4.86621 | gap 1, opp_overlap 2925594, overlap 2925594 2925595 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTGAGCAT TERM 3853 2925817 - 2925779 - R 80 -8.3 -4.2558 | gap 1 CATTTTTGACGAAAA CATGCCGATGAAATGTCA TTTT CGACACT-CATCGACACG CCCATCCCCAAACAG TERM 3854 2925844 - 2925830 - R 87 -11.4 -3.57263 | opp_overlap 2925842 ACGCCCATCCCCAAA CAGGCG TAA CGCCTG CAAAACGGGCAAAGC hycA 2926327 - 2925866 - | formate hydrogenlyase regulatory protein HycA hypA2 2926527 - 2926889 + | hydrogenase nickel insertion protein HypA TERM 3855 2927169 - 2927156 - g 75 -4.5 -4.82901 | CGTGCTGGACAAAAA CAACC GTCT GGCTG AACGCAACCGCGCGC hypB 2926893 - 2927765 + | hydrogenase isoenzymes nickel incorporation protein HypB hypC2 2927756 - 2928028 + | hydrogenase assembly chaperone HypC/HupF TERM 3856 2928378 - 2928366 - g 73 -9.1 -3.70902 | GCTGTTACAGGCAAA GGCAC GCG GTGCC GATGTGCGCATCGTT hypD 2928028 - 2929149 + | hydrogenase expression/formation protein HypD hypE 2929146 - 2930156 + | hydrogenase expression/formation protein HypE TERM 3857 2930196 - 2930212 + F 100 -13.7 -3.72576 | AGTCAATGACCTTTT GCACCGC TTT GCGGTGC TTTCCTGGAAGAACA TERM 3858 2930311 - 2930327 + G 72 -10.1 -3.35775 | overlap 2930310 CAGCAGCCCGATCTG GCCTCGC TGT GTGAGGC TCTTTCGCAACTGGT TERM 3859 2930398 - 2930346 - g 77 -10 -3.60792 | gap 2, opp_overlap 2930357 2930359 2930394 TTCGCAACTGGTAAA GCGTTCTGCGCTCGCCGACAACGC GGCTATT GTGTTGT-GGCAAGCGCAGA-CTC AACGTGCGTCTTATT TERM 3860 2931824 - 2931812 - g 85 -3.3 -5.44119 | overlap 2931813 GCGATCTGAAAAAAA TGGTC GCC GACCG AGAGTTCCGTAGTGA TERM 3861 2932213 - 2932200 - g 78 -5.2 -4.78326 | overlap 2932201 GCTGAAAGAAACAAA CGGC GTGGTT GCCG GGCCTAAAGGCGCTG fhlA 2930230 - 2932308 + | formate hydrogenlyase transcriptional activator EcSMS35_2857 2932314 - 2932781 + | molybdenum-pterin binding protein TERM 3862 2932790 - 2932818 + T 100 -16.1 -4.78326 | overlap 2932792 AGCGTAAACGCCTTA TTTGCCGGAGAGT ATG GCTCTCCGGCAGA TTTATTTCTTTGGAC TERM 3863 2932792 - 2932816 + T 100 -16.5 -2.66462 | overlap 2932790 CGTAAACGCCTTATT TGCCGGAGAGT ATG GCTCTCCGGCA GATTTATTTCTTTGG EcSMS35_2858 2933164 - 2932820 - | hypothetical protein EcSMS35_2859 2933375 - 2933241 - | hypothetical protein mutS 2933451 - 2936012 + | DNA mismatch repair protein MutS TERM 3864 2936019 - 2936045 + F 81 -11.7 -3.01924 | opp_overlap 2936019 CTGGTGTAATAACAA TTCCCGATAGT CTTTT GCTATCGGGAA TATTAACGACAACTG TERM 3865 2936045 - 2936019 - f 86 -11 -3.9461 | opp_overlap 2936019 CTGGTGTAATAACAA TTCCCGATAG TCTTTTG CTATCGGGAA TATTAACGACAACTG TERM 3866 2936112 - 2936077 - f 100 -10.6 -5.38326 | CGAATCAAATAAAAA TACCCTGTATAATAGG AAAT CTTATTTTACAGGGTA AAACCATGCCATCTA pphB 2936118 - 2936774 + | serine/threonine-protein phosphatase 2 TERM 3867 2936809 - 2936775 - T 74 -7.2 -4.23876 | gap 1, opp_overlap 2936776 2936779, overlap 2936772 2936767 2936776 TATAAAATTAAATAA CGTGGCCGGGTAAAG CAAAGC CTCTACCCGGC-ACT TTTTTATTAACACTT TERM 3868 2936808 - 2936776 - T 76 -10.7 -3.12699 | gap 1, opp_overlap 2936776 2936779, overlap 2936775 2936772 2936767 ATAAAATTAAATAAC GTGGCCGGGTAAAG CAAAGC CTCTACCCGGC-AC TTTTTTATTAACACT TERM 3869 2936776 - 2936808 + T 100 -8.5 -5.45652 | gap 1, opp_overlap 2936776 2936775 2936772 2936767, overlap 2936779 ATAAAATTAAATAAC GTGGCCGGGTAAAG CAAAGC CTCTACCCGGC-AC TTTTTTATTAACACT TERM 3870 2936779 - 2936806 + T 78 -11.3 -2.91061 | opp_overlap 2936776 2936775 2936772 2936767, overlap 2936776 AAATTAAATAACGTG GCCGGGTAAAG CAAAGC CTCTACCCGGC ACTTTTTTATTAACA kpdD 2937052 - 2936816 - | 4-hydroxybenzoate decarboxylase, subunit D kpdC 2938490 - 2937063 - | 4-hydroxybenzoate decarboxylase, subunit C kpdB 2939083 - 2938490 - | 4-hydroxybenzoate decarboxylase, subunit B TERM 3871 2938602 - 2938568 - G 77 -10.1 -3.60098 | gap 1, opp_overlap 2938568, overlap 2938572 ATGTTCGAGGCCAAA TTGATCCAGCACGCGG GCTA CCACGTGGTGGA-CAA TGTCATCTACCGTTT TERM 3872 2938599 - 2938572 - G 73 -12 -2.65354 | opp_overlap 2938568, overlap 2938568 TCGAGGCCAAATTGA TCCAGCACGCGG GCTA CCACGTGGTGGA CAATGTCATCTACCG TERM 3873 2939206 - 2939192 - H 91 -10 -4.65895 | TTCGTCACTGAAAAA CCGCTA TGA TAGCGG CAGATAGTTTGCCCG EcSMS35_2865 2939230 - 2939637 + | MarR family transcriptional regulator TERM 3874 2939715 - 2939738 + T 100 -12.4 -3.87075 | opp_overlap 2939715 CAAATAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT TERM 3875 2939738 - 2939715 - T 100 -14.6 -5.67711 | opp_overlap 2939715 CAAATAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT rpoS 2940749 - 2939757 - | RNA polymerase sigma factor RpoS nlpD 2941951 - 2940812 - | lipoprotein NlpD TERM 3876 2941276 - 2941290 + g 72 -5 -4.65078 | TGGTCGCAGTTGGCT TGTTGT TCG GCAACA TTTTGTTAGCACTCT TERM 3877 2941547 - 2941570 + g 83 -5.3 -5.14477 | GTTGCCAGTAATCCA GGCGATATA GAAAAG TGTGTCGCC TTTTTTCACTGTATA TERM 3878 2941920 - 2941908 - G 86 -10.5 -3.96224 | GAAACCAGTGACAAA GCCGC AAT GCGGC GAACGGTGAATTTTG pcm 2942717 - 2942091 - | protein-L-isoaspartate O-methyltransferase TERM 3879 2942230 - 2942256 + g 70 -10.9 -2.72511 | overlap 2942229 AGAATCCCGCCTTCG TCCAGCTGCGT CATTA GCGCAGTTGGA ATTTCCGGCGGTGCC surE 2943478 - 2942711 - | multifunctional protein SurE truD 2944502 - 2943453 - | tRNA pseudouridine synthase D ispF 2944978 - 2944499 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2945688 - 2944978 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 3880 2945653 - 2945641 - G 73 -9.1 -3.57462 | CATTCGACGGCCAAA TCCGG CCG CCGGA ACCACGGCGCAAACA ftsB 2946018 - 2945707 - | cell division protein FtsB EcSMS35_2874 2946125 - 2946006 - | hypothetical protein TERM 3881 2946101 - 2946123 + g 73 -11.4 -2.82142 | opp_overlap 2946099, overlap 2946100 ATACCGCGACAACGC GGGCAAATGT ACC ACATTTGTCC ATTGTTACGTATACC EcSMS35_2875 2946535 - 2946212 - | hypothetical protein cysC 2947190 - 2946585 - | adenylylsulfate kinase TERM 3882 2947130 - 2947100 - G 79 -12.6 -3.00525 | opp_overlap 2947096 2947100, overlap 2947095 2947103 GGCCGGTAAACCACA GCACTACACCACGA TGA CCGTGGTGTAGCTC GCGTTGTTGCACAGT TERM 3883 2947127 - 2947103 - G 90 -15.1 -2.7314 | opp_overlap 2947100 2947096, overlap 2947100 2947095 CGGTAAACCACAGCA CTACACCACGA TGA CCGTGGTGTAG CTCGCGTTGTTGCAC TERM 3884 2947153 - 2947189 + g 81 -9.4 -4.14627 | TGCACAGTGACTGGG TGGCTATGCCAGACGA CGTTT TCGTCATGCAGAGCCA TTATTTATCTCCCAG cysN 2948617 - 2947190 - | sulfate adenylyltransferase, subunit 1 TERM 3885 2947753 - 2947737 - G 70 -5.8 -4.26076 | opp_overlap 2947737 CGATCGCCATCAAAA GTCACG ATCCG CGCGAC GTTTGATTCCACACC cysD 2949527 - 2948619 - | sulfate adenylyltransferase, subunit 2 TERM 3886 2949679 - 2949667 - H 75 -4.8 -4.88228 | opp_overlap 2949676 AGCTAATATCAAAAA GTGC TTAAG GCAC CGGATTTCGGGCGTT TERM 3887 2950689 - 2950662 - g 75 -5.6 -4.62872 | gap 1 AGCAACGCGCAAAAA CAGCTGCATTCCC TGC GGGAA-ATAGCTG GCATGACGTAAGACT iap 2949779 - 2950816 + | alkaline phosphatase isozyme conversion peptidase TERM 3888 2951015 - 2951060 + G 73 -12 -2.79915 | opp_overlap 2951015 2951010, overlap 2951017 2951022 AGTTAAGGAACTTAA G-GCGCAACGGTTTATCCCCGC TGGC GCGGGGA-ACACTGTTGCGTAC TCTGGTCCGGTCGCT TERM 3889 2951017 - 2951057 + G 100 -17 -2.66634 | gap 1, opp_overlap 2951015 2951010, overlap 2951015 2951022 TTAAGGAACTTAAGG CGCAACGGTTTATCCCCGC TGGC GCGGGGA-ACACTGTTGCG TACTCTGGTCCGGTC EcSMS35_2880 2950813 - 2951124 + | hypothetical protein TERM 3890 2951235 - 2951258 + F 71 -8 -3.78351 | opp_overlap 2951231 2951233 GGCGCAGGGAACACT CGTGAGCGCG AGAA CGCGCGAACG TTTACTGCGGTTTAT EcSMS35_2881 2951918 - 2952031 + | hypothetical protein cas2 2952593 - 2952306 - | CRISPR-associated Cas2 family protein cas1 2953519 - 2952596 - | CRISPR-associated Cas1 family protein cse3 2954166 - 2953516 - | CRISPR-associated Cse3 family protein cas5e 2954894 - 2954148 - | CRISPR-associated Cas5 family protein TERM 3891 2954425 - 2954437 + g 70 -4.8 -4.56775 | GGCGCAAGGGGTAAT GCCA GCGGA TGGC TTTTTCGCCCCAGAT cse4 2955960 - 2954905 - | CRISPR-associated Cse4 family protein TERM 3892 2955140 - 2955154 + g 76 -3.5 -4.88405 | overlap 2955147 CAGGAGGCGTAGGCA CGGCT GGCAA AGCTG TTTTGTTTACCGGTT TERM 3893 2955824 - 2955812 - G 71 -9.1 -3.44553 | opp_overlap 2955812 2955811, overlap 2955804 TCAAAAAGTGCAGAA GTGCG CCA CGCAC GTTTCAGACTTTGCG cse2 2956511 - 2955975 - | CRISPR-associated Cse2 family protein TERM 3894 2956515 - 2956526 + r 76 -5.8 -4.87665 | TACAATACTCATTCA GCAG CCTC CTGC TTTTTCTCCCTGGCG cse1 2958070 - 2956508 - | CRISPR-associated Cse1 family protein TERM 3895 2958104 - 2958091 - R 82 -6.7 -5.00616 | opp_overlap 2958090 2958100 TCCTCTCGTAAAAAA GACCA TCCC TGGTC GGTTGTCCATCCTTC cas3 2960867 - 2958168 - | CRISPR-associated helicase Cas3 TERM 3896 2958697 - 2958658 - G 75 -11.4 -3.05844 | overlap 2958661 TGTGGCATCTGAATA GCACCTTGCTCACGCAGC ACAC GCTGCGTCAGCCAGATTC GCCCATGATCGGGAT TERM 3897 2958694 - 2958661 - G 73 -11.7 -2.75074 | overlap 2958658 GGCATCTGAATAGCA CCTTGCTCACGCAGC ACAC GCTGCGTCAGCCAGA TTCGCCCATGATCGG TERM 3898 2961272 - 2961302 + r 88 -9.1 -4.45083 | gap 1, opp_overlap 2961236 2961293 TGGGTTCGAACGCTG GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 3899 2961458 - 2961433 - R 100 -9.7 -5.45802 | opp_overlap 2961433 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 2962213 - 2961479 - | phosphoadenosine phosphosulfate reductase TERM 3900 2961868 - 2961888 + g 81 -11.1 -3.64822 | overlap 2961860 ACAGTTTGCCGTAGC GCGCTTCCT GCC AGGCAGCGC TTTCGGTAGCACGGT cysI 2963999 - 2962287 - | sulfite reductase (NADPH) hemoprotein, beta-component TERM 3901 2962671 - 2962642 - G 95 -11.5 -4.37092 | gap 1, overlap 2962654 2962655 ATTTTGTCGATAAAA GACGGCAGGAAACG CTC CGCTTCC-GCCATC GCCAGCGGGCAAGTC cysJ 2965798 - 2963999 - | sulfite reductase [NADPH] flavoprotein, alpha-component TERM 3902 2965335 - 2965381 + g 71 -2.4 -5.00616 | gap 3, opp_overlap 2965349, overlap 2965336 2965349 AATTCATAAGAGCTA TCGCCGAGGCT---AAACACGGC AAAT GCGGTGTTTTCCAGCTTCGGCGC TTTTTTGGAGAACAG TERM 3903 2965707 - 2965693 - G 70 -7.1 -4.0056 | overlap 2965685 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TGGGAGTTAAATCGG TERM 3904 2966025 - 2966045 + rH 70 -6.2 -4.21194 | ATTAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA EcSMS35_2893 2966124 - 2966011 - | hypothetical protein TERM 3905 2966457 - 2966445 - gH 91 -9.1 -4.67048 | opp_overlap 2966445 TGATGGTAAAAGAAA CCTGC ACC GCAGG TTGTATCTATCGCGG TERM 3906 2966445 - 2966457 + GH 75 -9.1 -3.64198 | opp_overlap 2966445 TGATGGTAAAAGAAA CCTGC ACC GCAGG TTGTATCTATCGCGG queD 2966117 - 2966479 + | queuosine biosynthesis protein QueD TERM 3907 2966605 - 2966636 + G 91 -11.5 -4.08689 | overlap 2966606 2966633 GCCGGTATTGCAGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGG TTTATCCGTTTTGTT TERM 3908 2966606 - 2966635 + G 93 -15 -3.03587 | overlap 2966605 2966633 CCGGTATTGCAGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG GTTTATCCGTTTTGT TERM 3909 2966633 - 2966644 + G 70 -3.6 -4.71426 | overlap 2966606 2966605 TACGCTGCGCGCGAG CGGG TTTA TCCG TTTTGTTACTGGAAC TERM 3910 2967293 - 2967309 + G 74 -10.1 -3.53811 | overlap 2967289 GTCGTGTTCCGGCAA GCGAGCT GCT GGCTCGC TTTAAAACGCATCCG EcSMS35_2895 2966557 - 2967828 + | pyridine nucleotide-disulphide oxidoreductase family protein TERM 3911 2967863 - 2967904 + G 73 -11.6 -2.61199 | overlap 2967836 2967862 2967865 2967891 TGCCGATGCGCCGCA CATTGTTCCGGCTGACTC CGTTGA GCGTCAGACGGTACAATG GTTGATTAACGCTTG TERM 3912 2968033 - 2968021 - g 79 -4.1 -5.14563 | overlap 2968031 TGTGCGACGAAAAAA CACTA CAA CAGTG GCGCTATCCACCTTC EcSMS35_2896 2967819 - 2968079 + | putative ferredoxin TERM 3913 2968165 - 2968188 + G 82 -7.4 -4.49906 | opp_overlap 2968152 AATGCCAGCCTGCAA CTGGCAATCG ACTC TGAATGCCAG TTTATTTCCGTGTTG EcSMS35_2897 2968096 - 2968671 + | glycerol-3-phosphate responsive antiterminator EcSMS35_2898 2969678 - 2968818 - | electron transfer flavoprotein EcSMS35_2899 2970454 - 2969675 - | electron transfer flavoprotein EcSMS35_2900 2971769 - 2970432 - | major facilitator family transporter TERM 3914 2971229 - 2971199 - G 72 -11.8 -2.52464 | overlap 2971215 GCGTGCCCCAACGTA GCAGCGTAATCAGC AAG GCTGGTAACGCCGC TGATGCCAGCAGCCA TERM 3915 2971821 - 2971800 - R 100 -14.5 -3.9461 | GTCCGGTAATAAGAA CGGCTTCTC GCCT GAGAAGCCG AAAAGGCAACGCCCC TERM 3916 2971855 - 2971826 - R 93 -11.4 -4.21936 | CTGAGAAGCCGAAAA GGCAACGCCCCG TCATCG CGGAACGCTGCC TCACACATTATTTTT EcSMS35_2901 2973317 - 2971863 - | FAD binding domain-containing protein TERM 3917 2972432 - 2972448 + g 70 -10.1 -3.17392 | TCCCTTCACCCGTCG CCTTCGC AAT GCGAGGG TTACCTTCAGCCATA TERM 3918 2972722 - 2972742 + g 78 -5.3 -4.76041 | overlap 2972726 TGACGAATGTCCGGG CCTGCCGCG CGG CGTGGTACG TTTTTAATACGTGTG TERM 3919 2973214 - 2973225 + g 82 -2.2 -5.34309 | GGAAATTTGCGAAAA CGGT CAAT ACTG TTTTTCTTTAATACT EcSMS35_2902 2974172 - 2973387 - | short chain dehydrogenase/reductase family oxidoreductase TERM 3920 2974205 - 2974242 + H 100 -20.1 -2.92712 | opp_overlap 2974205, overlap 2974209 GTAAAGCAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 3921 2974242 - 2974205 - H 100 -22.3 -6.02546 | opp_overlap 2974205 2974209 GTAAAGCAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 3922 2974209 - 2974238 + H 100 -15.1 -4.13 | opp_overlap 2974205, overlap 2974205 AGCAAAAAAAAGAAA GGTAACTTCCCCC GCGA GAGGGAAGTTACC TTTCTCATTATCTCT TERM 3923 2974246 - 2974268 + H 85 -7.8 -4.62069 | AAGTTACCTTTCTCA TTATCTCTGG TAA CTGGAGATAA TTTTTAGCATAAGGG TERM 3924 2974418 - 2974457 + H 100 -13 -6.08563 | opp_overlap 2974425 AATTACTAGAGACCT GAGAAAAGTAATCCACCT GAAA GGGCGGCTTACTTTTCTC TTTTTTTTGTCTATT TERM 3925 2974450 - 2974425 - H 70 -5.4 -4.4195 | opp_overlap 2974418 AGAGACCTGAGAAAA GTAATCCACC TGAAAG GGCGGCTTAC TTTTCTCTTTTTTTT EcSMS35_2903 2974490 - 2975767 + | major facilitator family transporter TERM 3926 2976145 - 2976164 + G 70 -4.2 -4.69622 | overlap 2976148 GAGCACACCAATCCT GATGTGGC ATAT GTCACCTC TTTTTCAGGTTATCT EcSMS35_2904 2975794 - 2977272 + | carbohydrate kinase, FGGY family protein TERM 3927 2977385 - 2977421 + F 71 -9.7 -3.08088 | overlap 2977389 AGCAGCGTTTATGCT TTAATTGCTAAACCGAT TTA ATTAGTTTAGCAATTAG TATATTGGAGCCTTT scrK 2977437 - 2978357 + | fructokinase TERM 3928 2978663 - 2978650 - g 79 -3.7 -5.06103 | overlap 2978651 ACAACGTTTAAAAAA TGCGG AATC CCGCG CCCAGGCGGCAGAAG scrY 2978525 - 2980042 + | sucrose porin ScrY TERM 3929 2980069 - 2980052 - f 79 -11.3 -3.00923 | opp_overlap 2980052 TTTTAATACCAGACA GCCTCAC GAAT GTGAGGC TTTTACTGAAATAAC TERM 3930 2980052 - 2980069 + F 93 -11.3 -4.26903 | opp_overlap 2980052 TTTTAATACCAGACA GCCTCAC GAAT GTGAGGC TTTTACTGAAATAAC scrA 2980103 - 2981473 + | PTS system sucrose-specific EIIBC component ScrA scrB 2981479 - 2982882 + | beta-fructofuranosidase TERM 3931 2983543 - 2983529 - g 74 -10 -3.5361 | GAAGGATTTACACAA GGCTTG CAG CAAGCC GGAGTAACGCTACAA scrR 2982908 - 2983915 + | sucrose operon repressor TERM 3932 2983932 - 2983958 + T 85 -8.1 -4.59773 | overlap 2983934 CCCGTCACTATCTTG CA-TCGCCCCTGT AAA AC-GGGGCGATTG TTTTTCAACCTGAAC TERM 3933 2983934 - 2983955 + T 90 -10.9 -4.41633 | gap 1, overlap 2983932 CGTCACTATCTTGCA TCGCCCCTGT AAA AC-GGGGCGA TTGTTTTTCAACCTG EcSMS35_2910 2984672 - 2984001 - | hypothetical protein TERM 3934 2984524 - 2984513 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 3935 2984616 - 2984603 - G 84 -3.7 -5.24551 | overlap 2984604 GTAAACGAATAAAAA TGGCG GGGA CGCCG GTAAAGTAACCCTCA EcSMS35_2911 2984706 - 2984819 + | hypothetical protein EcSMS35_2912 2984845 - 2985447 + | LemA family protein EcSMS35_2913 2985461 - 2986354 + | hypothetical protein TERM 3936 2987041 - 2987053 + G 71 -3.3 -4.84353 | overlap 2987040 GATGTCATCATTCGG CGGGT ATC GCTCG TTTGTTTTAGTTTAT EcSMS35_2914 2986369 - 2987517 + | hypothetical protein EcSMS35_2915 2987511 - 2988395 + | hypothetical protein TERM 3937 2988430 - 2988411 - f 74 -2 -5.28176 | overlap 2988413 CTCAGCCATAAAAAA TGCCAGCC CGAA GGCTGTAA TGCCGATCAGTTAAG TERM 3938 2988504 - 2988479 - f 75 -9.1 -3.61398 | opp_overlap 2988479 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT TERM 3939 2988479 - 2988504 + F 100 -9.8 -5.61596 | opp_overlap 2988479 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT EcSMS35_2916 2988512 - 2989840 + | IS4 transposase TERM 3940 2989851 - 2989822 - T 88 -9.3 -4.59109 | overlap 2989824 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGCCCGAAGGCT TERM 3941 2989849 - 2989824 - T 100 -16.3 -3.90762 | overlap 2989822 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCCCGAAGG eno 2991193 - 2989895 - | phosphopyruvate hydratase TERM 3942 2991236 - 2991264 + r 79 -11.7 -2.7458 | opp_overlap 2991238 2991241, overlap 2991235 CTGAAACTCCAGACA AACAACGCGTACC CAG GGTACGCGTTGCC GTTCTAACTTTTTTC TERM 3943 2991262 - 2991238 - R 100 -18.7 -4.07562 | opp_overlap 2991236 2991235, overlap 2991241 GAAACTCCAGACAAA CAACGCGTACC CAG GGTACGCGTTG CCGTTCTAACTTTTT TERM 3944 2991259 - 2991241 - R 100 -14.6 -4.15029 | opp_overlap 2991236 2991235, overlap 2991238 ACTCCAGACAAACAA CGCGTACC CAG GGTACGCG TTGCCGTTCTAACTT pyrG 2992917 - 2991280 - | CTP synthase TERM 3945 2992587 - 2992608 + g 78 -9.3 -3.90744 | TAACCTGTACGGTTG CGCCGAGGT AGTC GCCACGGCG TTCTTTACGCAGAAC EcSMS35_2919 2993936 - 2993145 - | MazG family protein TERM 3946 2993474 - 2993486 + g 74 -7.7 -4.11869 | opp_overlap 2993474 TCCAGTCGAAGCCAA CGTTG GCG CAACG TTTCTGGATTTTTTG chpA 2994343 - 2994008 - | pemK protein 1 TERM 3947 2994270 - 2994250 - G 78 -11.1 -3.42699 | opp_overlap 2994252, overlap 2994252 ACGGACTCAGGACAA CAGCCGGAC GAT GTCCGGCTT GCTCGCTACCTTTTG TERM 3948 2994268 - 2994252 - G 95 -13.7 -3.28447 | opp_overlap 2994252, overlap 2994250 GGACTCAGGACAACA GCCGGAC GAT GTCCGGC TTGCTCGCTACCTTT TERM 3949 2994252 - 2994268 + g 89 -13.7 -3.19656 | opp_overlap 2994252 2994250 GGACTCAGGACAACA GCCGGAC GAT GTCCGGC TTGCTCGCTACCTTT chpR 2994591 - 2994343 - | pemI protein 1 relA 2996903 - 2994669 - | GTP diphosphokinase rumA 2998252 - 2996951 - | 23S rRNA (uracil-5-)-methyltransferase RumA TERM 3950 2998848 - 2998863 + G 72 -5.4 -4.56961 | AGAGATCTTTATTTC CAGCGT GATG ATGCTG TTTTGTATCGGTATT TERM 3951 2999181 - 2999160 - g 70 -4.3 -4.57569 | opp_overlap 2999161, overlap 2999161 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 3952 3000286 - 3000273 - g 71 -2.3 -5.02323 | overlap 3000268 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGTA barA 2998309 - 3001065 + | sensor histidine kinase/response regulator BarA TERM 3953 3001280 - 3001261 - T 87 -11.4 -3.58343 | opp_overlap 3001261 GGCATCAGTCTCAAA CCGGCTCC TGAC AGAGCCGG TTTTTGTTTTCAGTC TERM 3954 3001261 - 3001280 + T 100 -10.7 -5.48213 | opp_overlap 3001261 GGCATCAGTCTCAAA CCGGCTC CTGACA GAGCCGG TTTTTGTTTTCAGTC EcSMS35_2925 3002636 - 3001296 - | glucarate dehydratase EcSMS35_2926 3003997 - 3002657 - | glucarate dehydratase gudP 3005351 - 3003999 - | glucarate permease EcSMS35_2928 3005571 - 3005446 - | hypothetical protein TERM 3955 3005522 - 3005504 - GH 79 -4.4 -4.93898 | overlap 3005467 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA EcSMS35_2929 3005565 - 3005693 + | hypothetical protein EcSMS35_2930 3006235 - 3005786 - | flavodoxin truC 3007035 - 3006253 - | tRNA pseudouridine synthase C EcSMS35_2932 3007364 - 3007035 - | hypothetical protein TERM 3956 3007415 - 3007444 + r 81 -10.7 -3.51411 | opp_overlap 3007417, overlap 3007411 3007416 TAGCAGGAATAAAAA AAGGGAGCACTGT ATTC ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 3957 3007416 - 3007443 + r 87 -14.2 -2.70525 | opp_overlap 3007417, overlap 3007415 3007411 AGCAGGAATAAAAAA AGGGAGCACTGT ATTC ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 3958 3007442 - 3007417 - R 100 -17.7 -5.84381 | opp_overlap 3007416 3007415 3007411 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGTGCTCCC GGTTCGTTTCGCAGC EcSMS35_2933 3008531 - 3007986 - | syd protein TERM 3959 3008434 - 3008411 - G 74 -8.9 -3.9392 | opp_overlap 3008411 3008410 CGGTAGTTGAAATAA TGCACGGTG AAGGAA CACCGTACA GTTCCTCACTCAACG TERM 3960 3009301 - 3009279 - g 71 -10.6 -2.86271 | opp_overlap 3009277 3009291 3009292, overlap 3009276 3009291 CCGCCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 3008599 - 3009447 + | queuine synthase TERM 3961 3010592 - 3010575 - g 73 -4.1 -4.86731 | gap 1, overlap 3010556 GCTGGTGAAAGAAAA TCGCC-GC GAC ACAGGCGA TGCCTACAGCTTTAA EcSMS35_2935 3009559 - 3010923 + | hypothetical protein TERM 3962 3010933 - 3010954 + F 91 -10.1 -4.72556 | overlap 3010951 ACGTAATCTCCCTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG TERM 3963 3011208 - 3011233 + F 78 -8.5 -4.06527 | gap 1, overlap 3011214 AGAAGTCAGATGTCG TTTAATGGGCAA ATA TTGCCC-TTAAA TTCTCTTTTACTTTT TERM 3964 3011214 - 3011228 + F 76 -10 -3.32941 | overlap 3011208 CAGATGTCGTTTAAT GGGCAA ATA TTGCCC TTAAATTCTCTTTTA EcSMS35_2936 3011479 - 3012768 + | serine transporter family protein TERM 3965 3012777 - 3012796 + F 90 -12.8 -3.27786 | overlap 3012789 3012791 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 3966 3013603 - 3013583 - g 72 -5.3 -4.4767 | opp_overlap 3013583 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA sdaB 3012826 - 3014193 + | L-serine ammonia-lyase 2 TERM 3967 3014205 - 3014223 + F 83 -12.4 -3.08774 | TTAATCTCTCCCGGA GGCCTCGT TTT GCGAGGCC TCTTCCCCGTTTCTC TERM 3968 3014473 - 3014462 - g 75 -7.2 -4.30576 | overlap 3014464 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG xni 3014304 - 3015059 + | exodeoxyribonuclease-9 fucO 3016315 - 3015164 - | lactaldehyde reductase fucA 3016987 - 3016340 - | L-fuculose phosphate aldolase TERM 3969 3017211 - 3017178 - g 73 -3.9 -4.74801 | TAACCCCATTAAAAA TGACCGCTCTTAAAA ATAT TTATCAAAACGGTCA TTTTTCTACTCTTCC EcSMS35_2941 3017177 - 3017314 + | hypothetical protein TERM 3970 3017723 - 3017740 + G 77 -6.3 -4.62957 | gap 1 ACAAATTTCCAGGCT GGCCTGAT CCA ATC-GGCC TTTTACTTTGGTTAT fucP 3017534 - 3018850 + | L-fucose:H+ symporter permease TERM 3971 3018904 - 3018893 - g 93 -2.2 -5.63103 | CTGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC fucI 3018883 - 3020658 + | L-fucose isomerase TERM 3972 3020723 - 3020750 + F 86 -12.9 -3.01791 | overlap 3020725 ACAAGCAAGAGTGGT TAGCCGGATAA GCAATG TTATCCGGCTA TATTGCAGGAGCGAT TERM 3973 3020725 - 3020748 + F 76 -11.1 -3.06696 | overlap 3020723 AAGCAAGAGTGGTTA GCCGGATAA GCAATG TTATCCGGC TATATTGCAGGAGCG fucK 3020767 - 3022185 + | L-fuculokinase fucU 3022187 - 3022609 + | fucose operon protein FucU TERM 3974 3022605 - 3022595 - f 77 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATACCGG TERM 3975 3022622 - 3022642 + F 74 -9.6 -3.34043 | overlap 3022623 TAATCTCATACCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 3976 3022623 - 3022641 + F 84 -13.1 -2.60212 | overlap 3022622 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 3977 3022915 - 3022933 + G 72 -11.6 -2.52464 | opp_overlap 3022914 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 3022667 - 3023398 + | L-fucose operon activator EcSMS35_2947 3024542 - 3023442 - | hypothetical protein EcSMS35_2948 3024930 - 3024535 - | hypothetical protein TERM 3978 3024903 - 3024889 - G 74 -8.5 -3.88603 | AGCCACAAAAATGAA GCCGC TAATG GCGGC GAAAATCAGCATAAA gcvA 3025866 - 3024949 - | glycine cleavage system transcriptional activator TERM 3979 3026108 - 3026122 + r 93 -10 -5.17576 | opp_overlap 3026107 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 3980 3026192 - 3026173 - R 74 -10.7 -2.57423 | opp_overlap 3026173 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTTACCTTG TERM 3981 3026173 - 3026192 + r 100 -10.7 -6.15259 | opp_overlap 3026173 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTTACCTTG EcSMS35_2950 3026445 - 3026218 - | putative lipoprotein csdA 3026637 - 3027842 + | cysteine desulfurase, catalytic subunit CsdA csdE 3027842 - 3028285 + | cysteine desulfurase, sulfur acceptor subunit CsdE TERM 3982 3028331 - 3028294 - T 72 -8.3 -3.59946 | opp_overlap 3028294 3028295 3028297, overlap 3028295 GGTTTAAGCACAGAA CCGGGTCGGAAAGGACG TTTG CGTCGCATCCGACCTGA TTGTTTACCCCTGAC TERM 3983 3028295 - 3028330 + T 70 -9.6 -2.95204 | opp_overlap 3028295 3028294, overlap 3028294 3028297 GTTTAAGCACAGAAC CGGGTCGGAAAGGACG TTTG CGTCGCATCCGACCTG ATTGTTTACCCCTGA EcSMS35_2953 3029136 - 3028336 - | ThiF family protein TERM 3984 3029182 - 3029162 - R 93 -10.4 -4.93365 | opp_overlap 3029162 CCTCAGAATTAAAAA GGGCGAGG TTATC CCTCACCC TGTCGTATCCGTCAA mltA 3030286 - 3029219 - | membrane-bound lytic murein transglycosylase A TERM 3985 3030843 - 3030867 + r 100 -11.5 -5.64274 | opp_overlap 3030843 TATGATGCTGATAAA CCGCAATGTGT TTC ACAAATTGCGG TTTTTTTGTACCTGA TERM 3986 3030867 - 3030843 - R 91 -11.5 -3.88291 | opp_overlap 3030843 TATGATGCTGATAAA CCGCAATGTGT TTC ACAAATTGCGG TTTTTTTGTACCTGA EcSMS35_2958 3031848 - 3030901 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 3987 3030995 - 3031009 + g 73 -11.4 -2.67902 | overlap 3030994 GACTCAACGGTGGCG GCCGCA ATA TGCGGC GTTGTAATGATATTC TERM 3988 3031890 - 3031871 - R 72 -7.8 -3.94188 | overlap 3031872 ACTCACTTCAAAGAA CGCCACCC CAAA AGATGGCG TGACCGGTTACTGTA EcSMS35_2959 3032516 - 3031920 - | KpsF/GutQ family sugar isomerase EcSMS35_2960 3033694 - 3032519 - | aminotransferase, classes I and II EcSMS35_2961 3035274 - 3033694 - | PTS system, maltose and glucose-specific IIBC component family protein TERM 3989 3034779 - 3034766 - G 71 -3.1 -4.82901 | GGGCCGCTATAAAAA CCTAA TGAT TCAGG AATGCGTAAATTAAC EcSMS35_2962 3036130 - 3035306 - | putative transcriptional antiterminator TERM 3990 3036008 - 3035995 - G 100 -8.1 -5.36441 | TTCTGACATAAAAAA TCCGG TTAG CCGGA TGCTCAGGGACCGAC TERM 3991 3036196 - 3036151 - H 100 -15.7 -6.06723 | gap 1, opp_overlap 3036148 3036151 GGCTCCAAAAAAAAA GGCAAGGC-ACGTCAGAAGTAA TGA TTACTTCAAACATTGCCTTGCC TGATTTAACAGTTAC TERM 3992 3036151 - 3036196 + H 78 -11.3 -2.92667 | gap 1, opp_overlap 3036151, overlap 3036148 GGCTCCAAAAAAAAA GGCAAGGC-ACGTCAGAAGTAA TGA TTACTTCAAACATTGCCTTGCC TGATTTAACAGTTAC EcSMS35_2963 3036226 - 3036378 + | hypothetical protein amiC1 3037641 - 3036388 - | N-acetylmuramoyl-L-alanine amidase AmiC TERM 3993 3036700 - 3036710 + g 81 -8.2 -4.4078 | opp_overlap 3036700 AGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTTACGCCAC TERM 3994 3039165 - 3039150 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 3037873 - 3039204 + | amino-acid N-acetyltransferase TERM 3995 3039209 - 3039264 + T 70 -7.6 -3.87815 | gap 1, opp_overlap 3039215 3039217, overlap 3039215 ATTTAGGGTAAGCGA TGAAAATCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAATTA-CG TTTATCCCCGTGAAC TERM 3996 3039259 - 3039215 - T 100 -14.3 -4.30978 | opp_overlap 3039209 3039215, overlap 3039217 GGTAAGCGATGAAAA TCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAA TTACGTTTATCCCCG TERM 3997 3039215 - 3039259 + T 100 -14.3 -3.32997 | opp_overlap 3039215 3039217, overlap 3039209 GGTAAGCGATGAAAA TCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAA TTACGTTTATCCCCG TERM 3998 3039257 - 3039217 - T 89 -14.7 -2.50381 | opp_overlap 3039215 3039209, overlap 3039215 TAAGCGATGAAAATC GCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGC AATTACGTTTATCCC recD 3041092 - 3039266 - | exodeoxyribonuclease V, alpha subunit TERM 3999 3040004 - 3040020 + g 79 -4.3 -5.00616 | opp_overlap 3040002 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 4000 3040796 - 3040774 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCGCC ACA GAGGATCATC GGCGTTGGTTCATCT recB 3044604 - 3041092 - | exodeoxyribonuclease V, beta subunit TERM 4001 3041238 - 3041223 - G 70 -6 -4.21954 | overlap 3041220 3041224 GGAACAGATAAATAA CGCCGC CAAA GTGGCG CTCATAGTCATAATC TERM 4002 3042599 - 3042616 + g 70 -5.5 -4.42619 | overlap 3042601 AGACGCCGCTCACCG CCTGCTG TTGC CAGCAAG TTTTCTGCAATGTTA TERM 4003 3043593 - 3043605 + g 74 -6.2 -4.57569 | overlap 3043592 3043600 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 4004 3043716 - 3043737 + g 76 -9.3 -3.76379 | CCTCAAACAGTGGAT GTCGCGGGG TTTC CCCCCCGGC TTTCGTGCGATCTTC TERM 4005 3044502 - 3044488 - G 71 -9.2 -3.53224 | overlap 3044499 CAGCGGGCGGGGAAA GGCGGC AGA ACCGCC TAGTCCAAGTAACAG TERM 4006 3044603 - 3044577 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptrA 3047515 - 3044627 - | protease III TERM 4007 3045251 - 3045268 + g 72 -5.5 -4.58395 | CGCTGCCAGTGCGGA GTCGGTG CTGT TACCGGC TTTTTCAAAGATGAC TERM 4008 3046701 - 3046729 + g 84 -3.7 -5.28755 | overlap 3046696 3046702 3046709 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT recC 3051059 - 3047691 - | exodeoxyribonuclease V, gamma subunit TERM 4009 3047839 - 3047861 + g 85 -8.4 -4.58395 | ATGTTGCCTTCGTAA GCCTGAAGGA ATT TCGTTCGGGC TTTTTGCAACGTGGA TERM 4010 3048080 - 3048068 - G 78 -5.5 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCACC ATTACCACCGCTGGC TERM 4011 3050104 - 3050086 - G 70 -4.4 -4.45083 | GTCACATCGACAAAA GCGTCCAG CTC CTGGCTGC CCTCCAGGTCAGAAA ppdC 3051419 - 3051072 - | prepilin peptidase-dependent protein C EcSMS35_2971 3051787 - 3051380 - | hypothetical protein TERM 4012 3051461 - 3051448 - GR 74 -3.1 -5.00616 | CGCGTGGCGAAAAAA CAATG TTTC CATCG ATGACTTCGCCTGTT ppdB 3052347 - 3051784 - | prepilin peptidase dependent protein B ppdA 3052808 - 3052338 - | prepilin peptidase-dependent protein A TERM 4013 3052971 - 3052952 - R 100 -10.7 -5.78622 | GGAGGGTAAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT thyA 3053787 - 3052993 - | thymidylate synthase TERM 4014 3053408 - 3053425 + g 72 -4.7 -4.64598 | GCTGAAACAATAATG CGGCGCG AATC CGGGTCG TTTTTCAGCTGGTTC TERM 4015 3053660 - 3053630 - G 72 -11.1 -3.09516 | opp_overlap 3053646 TCGTGGATGATGGAA CGCAGGTGGCAAC GTTTG GTTGTCACCAGCG GGAATCCATCCTGCA lgt 3054669 - 3053794 - | prolipoprotein diacylglyceryl transferase ptsP 3057066 - 3054820 - | phosphoenolpyruvate-protein phosphotransferase TERM 4016 3056372 - 3056412 + g 81 -10.6 -3.61398 | gap 2, opp_overlap 3056348 3056346 3056380 TCTTTTTGTGCACCG GCGGCAAA-GCGTTT-GCTG TAG CGGCGAAACTCGTTTGCCGC TTCTTCCAGCGCCCC nudH 3057609 - 3057079 - | (di)nucleoside polyphosphate hydrolase EcSMS35_2978 3058054 - 3058215 + | hypothetical protein TERM 4017 3058251 - 3058266 + F 73 -2.5 -5.04249 | TACACTGCGAATATT CGGCA CATAAT TGCTG TTTGTTTTTTAACCA TERM 4018 3058547 - 3058532 - g 76 -7.6 -4.27316 | opp_overlap 3058530 3058532 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCGCT TERM 4019 3058911 - 3058923 + G 85 -6.9 -4.86731 | CGAACGGATTCTGAC GCTGC CGC GCGGC TTTTATTTGAAGAAG mutH 3058294 - 3058983 + | DNA mismatch repair endonuclease MutH EcSMS35_2980 3059052 - 3059765 + | TerC family integral membrane protein EcSMS35_2981 3059903 - 3060121 + | putative lipoprotein TERM 4020 3060150 - 3060126 - f 80 -8.6 -4.20918 | opp_overlap 3060125 3060124, overlap 3060129 TTGAACGTTAACAAA TAAGGTCAGC ATCCG GCTGGCCTTA AGATTTTTCTCTTTC TERM 4021 3061055 - 3061045 - g 93 -8.2 -4.82855 | opp_overlap 3061044 3061042 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATAGC tas 3060229 - 3061269 + | NADP(H)-dependent aldo-keto reductase Tas TERM 4022 3061297 - 3061272 - T 86 -12.7 -3.27475 | opp_overlap 3061271 3061276, overlap 3061276 3061288 TCCGGCACCATAAGA TTAACGCCGAT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 4023 3061293 - 3061276 - T 73 -9.1 -3.43203 | opp_overlap 3061271 3061276, overlap 3061272 3061288 GCACCATAAGATTAA CGCCGAT TAAA ACCGGCG TTAAATATTAATGAC TERM 4024 3061335 - 3061305 - T 73 -9 -3.45571 | opp_overlap 3061308, overlap 3061288 3061299 3061308 GGCGTTAAATATTAA TGACGGCGCTGC CAGATCC ACAGCGCCGTTA TTGCCAGCGCAAACA TERM 4025 3061308 - 3061332 + T 78 -10 -3.61398 | opp_overlap 3061288 3061308 3061305 3061299 GTTAAATATTAATGA CGGCGCTG CCAGATCCA CAGCGCCG TTATTGCCAGCGCAA TERM 4026 3061332 - 3061308 - T 75 -10.7 -2.8742 | opp_overlap 3061308, overlap 3061288 3061305 3061299 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG TTATTGCCAGCGCAA lplT 3062494 - 3061301 - | lysophospholipid transporter TERM 4027 3061831 - 3061818 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 3064646 - 3062487 - | 2-acyl-glycerophospho-ethanolamine acyltransferase/acyl-acyl-carrier protein synthetase TERM 4028 3064759 - 3064742 - H 100 -12.7 -5.75945 | opp_overlap 3064742 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4029 3064742 - 3064759 + H 86 -12.7 -3.14132 | opp_overlap 3064742 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4030 3064962 - 3064945 - H 100 -12.7 -6.07627 | opp_overlap 3064944 3064941 3064951 ACCGGCAAAAAAAAA CCTGCGC ATCT GCGCAGG CTGGTGTAATTCATG TERM 4031 3065486 - 3065500 + G 93 -3.6 -5.5604 | GGTCGAACAGGTGGC TTATCA CAC TGGTAA TTTTTTATTGATTGG galR 3065232 - 3066263 + | transcriptional regulator GalR lysA 3067532 - 3066270 - | diaminopimelate decarboxylase lysR 3067654 - 3068589 + | transcriptional activator protein LysR EcSMS35_2987 3069268 - 3068576 - | aspartate racemase family protein TERM 4032 3069390 - 3069364 - R 100 -13 -5.30155 | CTATTAACGAAAAAA GGGCTGGATGTA CAG CACATCCGGCCC GTGAAATCAGACGCC araE 3070815 - 3069397 - | arabinose-proton symporter TERM 4033 3070872 - 3070854 - R 77 -4.6 -5.14477 | overlap 3070856 3070857 GACATAGTGAAAAAA TACGTGAA CAA TTCACACA GGTGTCAGGTCGGAA TERM 4034 3071107 - 3071090 - R 100 -12.7 -5.29782 | TACAGGTATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAA kduD 3071891 - 3071130 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4035 3071734 - 3071719 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTTGATGG kduI 3072757 - 3071921 - | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase TERM 4036 3072702 - 3072717 + g 72 -4.6 -4.65895 | overlap 3072704 AATTCATTGCGCAGC CCCTGG GTAT CCAGCG TTTTTGCATGCGCAC TERM 4037 3072803 - 3072817 + r 73 -5 -4.60797 | overlap 3072804 AATAGAAAACGATAG TGAAAC GCT GTTTCG TTTTCTCTATAAGGG TERM 4038 3072962 - 3072949 - R 80 -6.7 -4.78752 | ATGAGAATGGAAAAA TCAGG GAGC CCTGA AAATGTATGTCGACT EcSMS35_2992 3074225 - 3073044 - | acetyl-CoA acetyltransferase TERM 4039 3074313 - 3074300 - H 100 -5.3 -5.75945 | ATTGTTTAAAAAAAA GTGAT TTTT ATCAC AAAGGAAATACGCCT TERM 4040 3074522 - 3074505 - g 78 -8.5 -4.17316 | ATTTGGTCAAAAGAA GAAACTC TGTG GAGTTTC GCGCTCTACGGCACA EcSMS35_2993 3074481 - 3075710 + | serine transporter family protein TERM 4041 3075717 - 3075758 + F 100 -16.3 -4.35461 | gap 1, opp_overlap 3075713, overlap 3075718 TTTAGCTAATATCCA TTGTGAATGGTTCAAAATTG CTA CAATTTTGAACCATTC-CAG TTTTCATAATGTTCA TERM 4042 3075718 - 3075757 + F 100 -17.6 -3.20553 | gap 1, opp_overlap 3075713, overlap 3075717 TTAGCTAATATCCAT TGTGAATGGTTCAAAATTG CTA CAATTTTGAACCATTC-CA GTTTTCATAATGTTC EcSMS35_2994 3076284 - 3076802 + | hypothetical protein TERM 4043 3076837 - 3076862 + F 82 -10.5 -4.11216 | ATCATACTCTGCTTA TACGGGCATCT ATTG AAATGCCCGTA TTTTACAAATAAGCA EcSMS35_2995 3076987 - 3077199 + | IS1 transposase orfA EcSMS35_2996 3077210 - 3077713 + | IS1 transposase orfB EcSMS35_2998 3078870 - 3078118 - | M23B family peptidase TERM 4044 3078225 - 3078239 + g 76 -4.2 -5.00884 | opp_overlap 3078201 3078197 ATGCCGCATCAGTGC TCCCCA TAG TGGCGA TTTTTTGCCCAGCCT TERM 4045 3079584 - 3079564 - g 78 -8.3 -4.25658 | overlap 3079561 ACTTGACGAAAACAA GCGCGAT ACCGCCG ATCGCGC ACTGCTAACTCGCCA xdhA 3079286 - 3081583 + | xanthine dehydrogenase xdhB 3081594 - 3082472 + | xanthine dehydrogenase, FAD-binding subunit xdhC 3082469 - 3082948 + | xanthine dehydrogenase, iron-sulfur binding subunit TERM 4046 3082982 - 3082951 - T 93 -10.8 -4.5528 | opp_overlap 3082956, overlap 3082952 3082956 GAAAACGAAGTAAAA GGATATCCGGCCTG AATT CAGGCCGGATTCAC TGAGGTTATGTGTTT TERM 4047 3082980 - 3082952 - T 100 -14 -3.31541 | gap 1, opp_overlap 3082956, overlap 3082951 3082956 AAAACGAAGTAAAAG GATATCCGGCCTG AATT CAGGCCGGAT-TC ACTGAGGTTATGTGT TERM 4048 3082977 - 3082956 - T 100 -15.9 -3.14708 | opp_overlap 3082956, overlap 3082952 3082951 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG TERM 4049 3082956 - 3082977 + T 100 -15.9 -3.08471 | opp_overlap 3082956 3082952 3082951 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG EcSMS35_3002 3084766 - 3082988 - | sigma-54 dependent trancsriptional regulator TERM 4050 3085068 - 3085058 - H 70 -6.8 -4.07877 | GTATTTTACAAACAA CCAG AAG CTGG CATCAATTTGTGATC TERM 4051 3085391 - 3085381 - g 75 -6.8 -4.30576 | GCCGCAGCATTAAAA GCAC TGC GTGC TGAAAACATCTCAAC TERM 4052 3085562 - 3085538 - g 70 -6.3 -4.15328 | AAGGCAAATCACAAA TCGCTCACGGC GAA ACCGTGCGTGA AACCGCCAATATGAT TERM 4053 3085850 - 3085814 - g 100 -7.3 -5.58209 | overlap 3085816 TGAAAGGTAAAAAAA TCGCCATGACCTGGG CCTACTC CCCAAGCTATGGCAA ACCGCTCTCTGTACC EcSMS35_3003 3085243 - 3086433 + | aspartate/ornithine carbamoyltransferase family protein TERM 4054 3086440 - 3086461 + F 93 -13.7 -3.24232 | overlap 3086438 GTGAAATAACCCCTC GGGCCGATC AGCT GGTCGGCCC TCTATTTCCAGAGGC TERM 4055 3086779 - 3086767 - g 70 -4.9 -4.57569 | opp_overlap 3086775 TTATTGTGTGAAAAA TATCA TCT TGATA TCGAAACGCTGTCAT EcSMS35_3004 3086491 - 3087687 + | diaminopropionate ammonia-lyase EcSMS35_3005 3087745 - 3088956 + | M20/DapE family protein YgeY TERM 4056 3088974 - 3088993 + F 100 -15 -4.71482 | ACTCTTCACTTATTC CCCTCCGG TTCG CCGGAGGG TTTTTGGAGTTTGCT hyuA 3088997 - 3090394 + | dihydropyrimidinase EcSMS35_3007 3090442 - 3091374 + | carbamate kinase arcC-like protein TERM 4057 3091380 - 3091407 + T 89 -10.5 -4.54727 | opp_overlap 3091381, overlap 3091381 TTGTCAGTAATTAAA AGGCCGGGTGG GTAATA CCATCCGGCCA TTTTCATTTAAGCCA TERM 4058 3091381 - 3091406 + T 100 -14 -3.32354 | opp_overlap 3091381, overlap 3091380 TGTCAGTAATTAAAA GGCCGGGTGG GTAATA CCATCCGGCC ATTTTCATTTAAGCC TERM 4059 3091406 - 3091381 - T 100 -11.8 -4.45544 | opp_overlap 3091381 3091380 TGTCAGTAATTAAAA GGCCGGGTGG GTAATA CCATCCGGCC ATTTTCATTTAAGCC EcSMS35_3008 3093040 - 3091415 - | putative xanthine dehydrogenase accessory factor TERM 4060 3093084 - 3093070 - R 70 -9.2 -3.14683 | opp_overlap 3093066 ATATCCTTTCAGTAA CCCGGA ATA CCCGGG CCGCTAATTCACAAA EcSMS35_3009 3093858 - 3093088 - | hypothetical protein TERM 4061 3093231 - 3093218 - G 74 -3.1 -4.89852 | overlap 3093219 TCACATTGAGAAAAA CGGTT AATG AACCA GACTCGCCGACAACC TERM 4062 3093421 - 3093431 + g 72 -6.8 -4.2349 | opp_overlap 3093413 3093420 CATCACAGCAATCAC GCAG CAA CTGC TTTTGGGTATGCAAG EcSMS35_3010 3093961 - 3094539 + | hypothetical protein TERM 4063 3095509 - 3095473 - g 78 -5.7 -4.7373 | overlap 3095474 GGATTGCAGGAAAAA CGCGAATGCCTGCAGGC CTT ACCGGCACGCATCCCCA CCAGCATGGTAGAAG TERM 4064 3095973 - 3095983 + G 73 -4 -4.78107 | TGCCAGTCAGCTGAC TATC CGC GATA TTTTTGATACTGGTA TERM 4065 3096996 - 3096976 - g 71 -3.2 -4.84359 | opp_overlap 3096977 3096980, overlap 3096977 3096980 CCAGGCGTAGAAAAA GCAACGGT CGTTT ACCGTCGT TCACTGCAAGAGATG EcSMS35_3011 3094861 - 3097959 + | pyridine nucleotide-disulfide family oxidoreductase TERM 4066 3098377 - 3098387 + G 81 -6.8 -4.62471 | GGTCGCTCTCCACAT TGCG CAA CGCA TTTTTAAAAGTTGGC TERM 4067 3098552 - 3098567 + G 85 -11.8 -3.60098 | opp_overlap 3098551 GGTGGAAGCACATAT CGGCGC TCAC GCGCCG TTTACCGTGCCGGAT ssnA 3097962 - 3099290 + | amidohydrolase family protein SsnA TERM 4068 3099325 - 3099299 - f 100 -15.2 -4.17701 | opp_overlap 3099301, overlap 3099301 GGCATAAATGACAAA TACCCTCTTCCC GTA GGGAAGAGGGTT AAATAAGGAAAGAAG TERM 4069 3099323 - 3099301 - f 100 -17.8 -3.67823 | opp_overlap 3099301, overlap 3099299 CATAAATGACAAATA CCCTCTTCCC GTA GGGAAGAGGG TTAAATAAGGAAAGA TERM 4070 3099301 - 3099323 + F 100 -17.8 -3.05384 | opp_overlap 3099299 3099301 CATAAATGACAAATA CCCTCTTCCC GTA GGGAAGAGGG TTAAATAAGGAAAGA EcSMS35_3013 3099341 - 3100120 + | putative selenate reductase, FAD-binding subunit EcSMS35_3014 3100117 - 3102987 + | putative hypoxanthine oxidase XdhD TERM 4071 3103013 - 3102996 - f 84 -8.3 -4.39107 | opp_overlap 3102995 3102997, overlap 3102997 AATATAAGTAATAAA TGGCCGC TTCG GCGGCCT GTTTCTCTGTTTGAA TERM 4072 3103012 - 3102997 - f 83 -11.8 -3.21837 | opp_overlap 3102995 3102997, overlap 3102996 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA TERM 4073 3102997 - 3103012 + F 93 -11.8 -3.73323 | opp_overlap 3102997 3102996, overlap 3102995 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA EcSMS35_3015 3103152 - 3104552 + | xanthine/uracil permease family protein guaD 3104570 - 3105886 + | guanine deaminase TERM 4074 3106925 - 3106909 - g 73 -11.5 -2.77182 | overlap 3106906 3106919 GTTTATATCGAATCA GCGGCAG GAA CCGCCGC CGGGGGTAAAACAGG EcSMS35_3017 3105922 - 3107289 + | sulfate permease family inorganic anion transporter TERM 4075 3107319 - 3107294 - T 78 -11.1 -3.1352 | opp_overlap 3107295, overlap 3107292 3107290 GGGCAATCTAATAGA TTCTCCGCGCC TTTC AGCGCGGAGAT TTCTTTCACAGAGGA TERM 4076 3107295 - 3107318 + T 100 -13.9 -4.41348 | opp_overlap 3107294 3107292 3107290 GGCAATCTAATAGAT TCTCCGCGC CTTTCA GCGCGGAGA TTTCTTTCACAGAGG EcSMS35_3018 3107813 - 3107325 - | 4Fe-4S binding protein aegA2 3109747 - 3107813 - | protein aegA TERM 4077 3108697 - 3108669 - G 77 -10.3 -3.57792 | opp_overlap 3108668 TTATCGAGTTTGAAA GGAGGTATGCCAA AAG TCAGCATACCGCC AATTTCTGGATGGCG TERM 4078 3109248 - 3109261 + g 78 -8.1 -4.30844 | CTGCGAGATGGCTGA GCGTC TGAT GACGC TTTTCCTGCTGCCGT TERM 4079 3110014 - 3110030 + H 83 -10.9 -3.60661 | GTTCTCTTCTCATTT TCGTGGT TTA ACCACGA TTATGTGATTGCCTC EcSMS35_3020 3110039 - 3111616 + | putative xanthine permease EcSMS35_3021 3111618 - 3111743 + | hypothetical protein idi 3111866 - 3112414 + | isopentenyl-diphosphate delta-isomerase, type 1 TERM 4080 3112436 - 3112419 - T 100 -10.5 -5.33848 | opp_overlap 3112419 AGCACAATTAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAACGT lysS 3113974 - 3112457 - | lysyl-tRNA synthetase LysS prfB 3115082 - 3113984 - | peptide chain release factor 2 TERM 4081 3115075 - 3115089 + g 74 -2.8 -4.87892 | TTTACCGGATTAATT TCAAAC ATG GTCTGA TTTCTTTTCTTGAGC TERM 4082 3115125 - 3115151 + r 100 -11.7 -5.24129 | gap 1, opp_overlap 3115125 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG TERM 4083 3115151 - 3115125 - R 85 -11.7 -3.30903 | gap 1, opp_overlap 3115125 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG recJ 3116906 - 3115173 - | single-stranded-DNA-specific exonuclease RecJ TERM 4084 3115449 - 3115463 + g 73 -11.4 -2.76442 | opp_overlap 3115410, overlap 3115446 CCACGGGCCAGCATC GCGCAG CAG CTGCGC TACTTCCATGGTCAT dsbC 3117622 - 3116912 - | thiol:disulfide interchange protein DsbC TERM 4085 3117115 - 3117125 + g 84 -4 -5.19879 | CTGCCATCACATCAT CAAA CGC TTTG TTTTTATCTTTCGCA xerD 3118543 - 3117647 - | tyrosine recombinase XerD fldB 3118655 - 3119176 + | flavodoxin TERM 4086 3119183 - 3119212 + T 75 -8.5 -3.77188 | TACGCCTGATGTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TCTTTATCTTTGCGT EcSMS35_3029 3119623 - 3119216 - | hypothetical protein EcSMS35_3030 3119870 - 3119604 - | TPR repeat-containing protein ygfZ 3120113 - 3121093 + | tRNA-modifying protein ygfZ TERM 4087 3121091 - 3121143 + T 74 -7.7 -4.09685 | opp_overlap 3121095 3121096, overlap 3121093 3121096 3121097 3121098 TATTCGCTCGAAGAG TAAATCTCTGTGTCGCATCAGGC ATTTATC GCCTGATGCGACGCGGGTGTGTC TTTTCAGGCCTACAA TERM 4088 3121093 - 3121141 + T 78 -10.3 -3.64716 | opp_overlap 3121095 3121096, overlap 3121091 3121096 3121097 3121098 TTCGCTCGAAGAGTA AATCTCTGTGTCGCATCAGGC ATTTATC GCCTGATGCGACGCGGGTGTG TCTTTTCAGGCCTAC TERM 4089 3121138 - 3121095 - T 72 -8.1 -3.92324 | gap 1, opp_overlap 3121093 3121091 3121096 3121097 3121098, overlap 3121096 CGCTCGAAGAGTAAA TCTCTGTGTCGCATCAGGCA TTTAT CGCCTGATGCGACGCGG-GT GTGTCTTTTCAGGCC TERM 4090 3121096 - 3121139 + T 100 -14 -3.40175 | gap 1, opp_overlap 3121096 3121095, overlap 3121093 3121091 3121097 3121098 GCTCGAAGAGTAAAT C-TCTGTGTCGCATCAGGC ATTTATC GCCTGATGCGACGCGGGTG TGTCTTTTCAGGCCT TERM 4091 3121137 - 3121096 - T 78 -11.6 -2.95073 | gap 1, opp_overlap 3121093 3121091 3121096 3121097 3121098, overlap 3121095 GCTCGAAGAGTAAAT CTCTGTGTCGCATCAGGCA TTTAT CGCCTGATGCGACGCGG-G TGTGTCTTTTCAGGC TERM 4092 3121097 - 3121137 + T 100 -17.7 -3.26779 | opp_overlap 3121096 3121095, overlap 3121096 3121093 3121091 3121098 CTCGAAGAGTAAATC TCTGTGTCGCATCAGGC ATTTATC GCCTGATGCGACGCGGG TGTGTCTTTTCAGGC TERM 4093 3121098 - 3121136 + T 100 -19 -2.55585 | opp_overlap 3121096 3121095, overlap 3121097 3121096 3121093 3121091 TCGAAGAGTAAATCT CTGTGTCGCATCAGGC ATTTATC GCCTGATGCGACGCGG GTGTGTCTTTTCAGG EcSMS35_3032 3121829 - 3121170 - | hemolysin III family channel protein EcSMS35_3033 3122304 - 3121993 - | hypothetical protein bglA 3122343 - 3123782 + | 6-phospho-beta-glucosidase BglA TERM 4094 3123920 - 3123907 - T 91 -9.5 -4.8143 | opp_overlap 3123907 TTAACAAGCTAAAAA GGCGC CGAA GCGCC TTTAGAAGATAGTCG TERM 4095 3123907 - 3123920 + T 75 -9.5 -3.56092 | opp_overlap 3123907 TTAACAAGCTAAAAA GGCGC CGAA GCGCC TTTAGAAGATAGTCG gcvP 3126819 - 3123946 - | glycine dehydrogenase (decarboxylating) gcvH 3127327 - 3126938 - | glycine cleavage system H protein TERM 4096 3127374 - 3127354 - R 70 -8.9 -3.16667 | overlap 3127352 3127351 CAAAAAAGTAAATCA CGCGACGGC TTT GCCGTTACG CACAAAAACAGGTTT gcvT 3128445 - 3127351 - | glycine cleavage system T protein EcSMS35_3038 3128749 - 3128621 - | hypothetical protein EcSMS35_3039 3128706 - 3128819 + | hypothetical protein EcSMS35_3040 3130095 - 3128893 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 4097 3129495 - 3129507 + g 73 -9.1 -3.67775 | opp_overlap 3129483 AAACCTGCCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 3131296 - 3130118 - | 2-octaprenyl-6-methoxyphenol hydroxylase pepP 3132618 - 3131293 - | Xaa-Pro aminopeptidase TERM 4098 3132551 - 3132537 - G 75 -5.6 -4.72272 | opp_overlap 3132537 3132541, overlap 3132538 3132540 3132541 CTGGTGCAGCAAAAA TCAGCG CGG CGCTGC CGGGTTGCATTTGCT TERM 4099 3132550 - 3132538 - G 71 -9.1 -3.43042 | opp_overlap 3132537 3132541, overlap 3132537 3132540 3132541 TGGTGCAGCAAAAAT CAGCG CGG CGCTG CCGGGTTGCATTTGC EcSMS35_3043 3133228 - 3132644 - | YecA family protein TERM 4100 3133616 - 3133597 - g 77 -3.4 -5.08601 | overlap 3133604 TTAGCGCAAGAAAAA GCGAAGAC TCGT GACTACGC GGCAAGTATGGAACA EcSMS35_3044 3133390 - 3133719 + | hypothetical protein TERM 4101 3134390 - 3134413 + G 74 -3 -4.91109 | overlap 3134391 3134394 CTTTGATGAGTACGG TCAGCGCCTG GGAA TGGGCGGTGG TTTTTATGATCGAAC EcSMS35_3045 3133965 - 3134567 + | 5,10-methenyltetrahydrofolate synthetase TERM 4102 3134744 - 3134763 + T 87 -11.4 -3.66178 | ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 4103 3134908 - 3134938 + T 74 -8.2 -4.07568 | opp_overlap 3134912, overlap 3134912 TGGAAAAGGGATAAA AAAACGGGCAAGTC AGT GACCTGCCCGTTAA TTTTCAGAGAAGGGG TERM 4104 3134934 - 3134912 - T 100 -15.6 -5.68039 | opp_overlap 3134912 3134908 AAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA TERM 4105 3134912 - 3134934 + T 100 -13.4 -3.66908 | opp_overlap 3134912, overlap 3134908 AAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA serA 3136188 - 3134956 - | phosphoglycerate dehydrogenase TERM 4106 3135620 - 3135633 + g 72 -4.5 -4.70515 | overlap 3135619 3135621 TGTACCTGAGTGGCG TTGCC CAGC GGCAG TTTGTTTTCAATATC TERM 4107 3136273 - 3136255 - R 77 -3.2 -5.27399 | overlap 3136258 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCAA TERM 4108 3136270 - 3136258 - R 73 -4.9 -4.69962 | overlap 3136255 CATATCAAAAAATAA TATTG CGG CAATA TGAACGTTTGCGTCG TERM 4109 3136417 - 3136443 + r 78 -11.6 -2.91873 | opp_overlap 3136410 3136408, overlap 3136414 AATGAAGAGAATTTT TTTAACGGGGGA GGT TCCCCCGTCAGA TCATTTCACAATGGT rpiA 3137103 - 3136444 - | ribose 5-phosphate isomerase A TERM 4110 3136530 - 3136552 + g 72 -7 -4.20531 | AGCCAACAGTCACCA CGCCAGGAAT CGC ATTTATGGCG TTTTCCATCGCTATC EcSMS35_3048 3138055 - 3137159 - | LysR family transcriptional regulator EcSMS35_3049 3138156 - 3138785 + | azoreductase type 1 family protein EcSMS35_3050 3138802 - 3139062 + | hypothetical protein EcSMS35_3051 3139124 - 3140449 + | ferric reductase/oxidoreductase, FAD/NAD binding iciA 3140520 - 3141413 + | chromosome initiation inhibitor TERM 4111 3141451 - 3141423 - f 100 -13.4 -3.80114 | opp_overlap 3141416 3141426, overlap 3141426 GATTAATCCATCAAA TAATGCCTGATA GCACA TATCAGGCATTA TCCGCACGTCTTTTT TERM 4112 3141426 - 3141448 + F 80 -10.7 -3.30007 | opp_overlap 3141426 3141423, overlap 3141416 TAATCCATCAAATAA TGCCTGATA GCACA TATCAGGCA TTATCCGCACGTCTT TERM 4113 3141448 - 3141426 - f 86 -10.7 -4.02571 | opp_overlap 3141416 3141426, overlap 3141423 TAATCCATCAAATAA TGCCTGATA GCACA TATCAGGCA TTATCCGCACGTCTT TERM 4114 3142089 - 3142110 + G 90 -8.1 -4.73682 | gap 1, opp_overlap 3142087, overlap 3142088 GATGACCATGAATGG CGC-AGTACT ACC AGTACTGGCG TTTTATATTGTCGCC TERM 4115 3142486 - 3142496 + G 70 -6.8 -4.06419 | AACGTCGCCATGTTG CGTG CGG CACG TTATTTATGGAGCGA msm 3141616 - 3143760 + | methylmalonyl-CoA mutase TERM 4116 3144091 - 3144103 + G 72 -6.9 -4.1552 | opp_overlap 3144082, overlap 3144092 GAATGACCTGGCGCG TGCCG AGG CGGCG TTTATTCGCCCGGTA EcSMS35_3054 3143753 - 3144748 + | LAO/AO transport system ATPase EcSMS35_3055 3144759 - 3145544 + | methylmalonyl-CoA decarboxylase EcSMS35_3057 3145568 - 3147046 + | acetyl-CoA hydrolase/transferase EcSMS35_3056 3147939 - 3147043 - | LysR family transcriptional regulator TERM 4117 3147832 - 3147857 + g 84 -3.9 -5.24129 | opp_overlap 3147838, overlap 3147833 CGCGGCAATGCTTTT ACCAAATGGCG AAGC CGTCATATGGA TTTTTTCTGCCGCCC TERM 4118 3148101 - 3148076 - R 84 -13.3 -2.64472 | opp_overlap 3148075 3148074, overlap 3148063 3148073 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAATATTATTGTGCT EcSMS35_3058 3148847 - 3148107 - | hypothetical protein argO 3149575 - 3148940 - | arginine exporter protein ArgO TERM 4119 3150138 - 3150152 + G 76 -4.2 -4.96848 | overlap 3150140 TTACAGTTTTTCCTT GGCTAC CCG GTAGGC TTTTTCTCTACCAGG EcSMS35_3060 3149691 - 3150734 + | solute-binding family 7 protein TERM 4120 3150744 - 3150766 + T 100 -17.8 -3.71527 | opp_overlap 3150737 3150736 3150727 CGTTAAATTGGTAGT GCGCCCATGA ACT TCATGGGCGC TTTACATGATTAACG mscS 3151651 - 3150776 - | small-conductance mechanosensitive channel TERM 4121 3151816 - 3151800 - R 93 -9.3 -5.00616 | overlap 3151801 CTTTTGGCGAAAAAA TCCCCGC AGA GCGGGGC TCAGACAGATATCAA TERM 4122 3151815 - 3151801 - R 95 -12.8 -3.60048 | overlap 3151800 TTTTGGCGAAAAAAT CCCCGC AGA GCGGGG CTCAGACAGATATCA TERM 4123 3151984 - 3151968 - R 100 -11.5 -5.86061 | TTTTAGCAAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fbaA 3153088 - 3152009 - | fructose-bisphosphate aldolase TERM 4124 3153267 - 3153247 - R 77 -3.1 -5.20216 | overlap 3153248 TAGAGTATGAAAAAA TGCGTGCTC TAA AAGCGCGCT GAAACAAGGGCAGGT TERM 4125 3153271 - 3153297 + r 95 -7.3 -5.37865 | gap 1, opp_overlap 3153275, overlap 3153272 3153275 TAAAAGCGCGCTGAA ACA-AGGGCAGG TTTC CCTGCCCTGTGA TTTTTTACTTCTTAG TERM 4126 3153272 - 3153296 + r 85 -10.8 -3.81092 | gap 1, opp_overlap 3153275, overlap 3153271 3153275 AAAAGCGCGCTGAAA CA-AGGGCAGG TTTC CCTGCCCTGTG ATTTTTTACTTCTTA TERM 4127 3153275 - 3153292 + r 90 -12.7 -3.27687 | opp_overlap 3153275, overlap 3153272 3153271 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT TERM 4128 3153292 - 3153275 - R 100 -12.7 -3.90922 | opp_overlap 3153272 3153271 3153275 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT pgk 3154465 - 3153302 - | phosphoglycerate kinase epd 3155534 - 3154515 - | D-erythrose-4-phosphate dehydrogenase TERM 4129 3155612 - 3155626 + H 72 -10 -2.87756 | opp_overlap 3155604 3155605, overlap 3155609 GGGGAAACCTTACCT GTCGCA AAC TGCGAC TGATTGGTTAATTGT EcSMS35_3065 3155906 - 3156337 + | hypothetical protein EcSMS35_3066 3156360 - 3156938 + | hypothetical protein EcSMS35_3067 3156939 - 3157646 + | hypothetical protein EcSMS35_3068 3157628 - 3158311 + | ABC transporter, ATP-binding protein TERM 4130 3158886 - 3158909 + G 81 -9.6 -4.053 | opp_overlap 3158882 CATAGCAATCAGTCA TGACGCCG CATTTACC CGGCGTCA TTTCTCTCGGGTGGT EcSMS35_3070 3158305 - 3158982 + | ABC transporter, ATP-binding protein EcSMS35_3069 3159667 - 3158954 - | hypothetical protein TERM 4131 3159316 - 3159326 + g 70 -6.8 -4.10453 | overlap 3159317 AATCCCCTTCCACGA CCTG GCG CAGG TTTTCCGCCAGTTTC EcSMS35_3071 3160173 - 3159664 - | mannitol operon repressor glpX2 3161160 - 3160195 - | fructose-1,6-bisphosphatase, class II TERM 4132 3161031 - 3161069 + g 82 -2.5 -5.35224 | overlap 3161039 3161050 GAAAAGCGACGTCGT TTAATG-CCTGGCGCATCG CGG TGAC-CGCCAGGCCATCAA TTTTATTTTTGTCGC TERM 4133 3161102 - 3161121 + g 87 -13.6 -3.05384 | overlap 3161104 CATCCGGTTTGCGGC CAGGCAGC CAAC GCTGCCTG TTCCGTAACGCGAAA sorE 3162434 - 3161157 - | L-sorbose 1-phosphate reductase cmtB 3164308 - 3163865 - | mannitol-specific cryptic phosphotransferase enzyme IIA component TERM 4134 3164459 - 3164476 + H 80 -7.1 -4.54553 | opp_overlap 3164458 3164459 3164461 CATGAAATCAATAAT TACAAAG TCAA CTTTGTA TTTGTTATGTTTATC TERM 4135 3164550 - 3164567 + H 73 -2.7 -5.15634 | opp_overlap 3164553, overlap 3164553 CGCCATTTATTTATT GAATGTT CGAA AACATAC TTTTTTAATGCAATG TERM 4136 3164904 - 3164884 - g 77 -9.7 -3.64703 | TCCCTTTTATGGAAA GCGTGGAGA AAA TTTCCACGC GTAATCAGGCTGTGG TERM 4137 3165260 - 3165246 - g 72 -4.3 -4.72986 | GACGCTTATGAAAAA TCGAT TGAAG ATCGA ATGAAAGCAGAAGTC TERM 4138 3165310 - 3165299 - g 70 -4.4 -4.44548 | CACACGTAAGCAAAA TCTG GAAA CAGA GAAAATCCAGGCGCA EcSMS35_3076 3164685 - 3165593 + | SPFH domain-containing protein/band 7 family protein TERM 4139 3165616 - 3165599 - T 100 -14.1 -5.65513 | TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTGAAACTGATGGCA TERM 4140 3165796 - 3165767 - T 89 -12.1 -3.62046 | opp_overlap 3165773 GCACTTTGCCAATAA TCTGAAGGGCCGC TTTC GCGGCCCTTCTCA CAAAGCATCTTACCG TERM 4141 3165773 - 3165790 + T 100 -14.1 -3.28924 | opp_overlap 3165767 TGCCAATAATCTGAA GGGCCGC TTTC GCGGCCC TTCTCACAAAGCATC tktA 3167804 - 3165813 - | transketolase TERM 4142 3167499 - 3167515 + g 83 -10.1 -4.13945 | opp_overlap 3167498, overlap 3167500 AGCGGTGTAACCCAC TTCCGGG TGG CCCGGAG TTTTAGAGTGCAGCT TERM 4143 3167500 - 3167514 + g 75 -11.4 -3.08046 | opp_overlap 3167498, overlap 3167499 GCGGTGTAACCCACT TCCGGG TGG CCCGGA GTTTTAGAGTGCAGC EcSMS35_3078 3168082 - 3168840 + | M48B family peptidase speB 3169808 - 3168888 - | agmatinase TERM 4144 3169441 - 3169431 - G 72 -6.8 -4.1822 | CGGCAGCGTAACAAA GTGG TCA CCAC CGAAGGAGAGCATAC TERM 4145 3169768 - 3169756 - G 77 -3.4 -5.03314 | opp_overlap 3169765 GGCAGGCGTAAAAAA CCAA AGGCG TTGG AAACCAGTGAGTTAT TERM 4146 3169844 - 3169876 + r 95 -14.9 -3.27525 | opp_overlap 3169844, overlap 3169839 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC TERM 4147 3169876 - 3169844 - R 100 -14.9 -5.71712 | opp_overlap 3169844 3169839 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC EcSMS35_3080 3170675 - 3169944 - | putative lipoprotein TERM 4148 3170807 - 3170768 - R 93 -10 -5.1383 | overlap 3170772 3170799 AAGAATATATAAAAA GAAAGCGGGCCGATTTAC GTAA ATAAATCGACCCGCCAGC GGAATAATCTTAATT TERM 4149 3170803 - 3170772 - R 100 -16 -5.02777 | overlap 3170768 3170799 ATATATAAAAAGAAA GCGGGCCGATTTAC GTAA ATAAATCGACCCGC CAGCGGAATAATCTT speA 3172719 - 3170821 - | arginine decarboxylase TERM 4150 3171126 - 3171116 - G 72 -6.8 -4.2704 | CCGACCATGAAGAAA CCGA GCA TCGG CGGATTCTCTGGATC EcSMS35_3082 3172937 - 3172806 - | hypothetical protein TERM 4151 3173014 - 3172997 - R 87 -8.5 -4.52703 | opp_overlap 3172987 3173009, overlap 3172987 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC TERM 4152 3173253 - 3173277 + r 74 -2.2 -5.27335 | gap 1, overlap 3173257 ACCCGGCTGGAAGTG GCAACACGA AAGAAACG TCGTGT-GC TTTTTATTTAAGCCG TERM 4153 3173291 - 3173301 + r 79 -8.2 -4.36914 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA EcSMS35_3083 3173536 - 3173285 - | hypothetical protein TERM 4154 3174068 - 3174056 - g 91 -9.1 -4.59853 | TGAAGTGCGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 4155 3174667 - 3174655 - g 72 -5.5 -4.57482 | opp_overlap 3174655 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGTGA TERM 4156 3174732 - 3174703 - g 74 -2.7 -5.00616 | gap 1, overlap 3174711 TCCCGTGGGAAAAAA CCGACAAAGCGCAG CTG CTGCGCGATG-CTG CCGGTCTGAAGTAAT TERM 4157 3174725 - 3174711 - g 91 -11.4 -4.11869 | overlap 3174703 GAAAAAACCGACAAA GCGCAG CTG CTGCGC GATGCTGCCGGTCTG metK 3173592 - 3174746 + | S-adenosylmethionine synthetase TERM 4158 3174787 - 3174769 - f 88 -11.7 -3.53444 | opp_overlap 3174769 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4159 3174769 - 3174787 + F 100 -11.7 -5.48213 | opp_overlap 3174769 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4160 3175101 - 3175120 + F 78 -6.5 -4.68994 | overlap 3175081 GTAAGCGATTACACT GATGTGA TTTGCT TCACATC TTTTTACGTCGTACT galP 3175182 - 3176576 + | galactose-proton symporter sprT 3176653 - 3177150 + | protein SprT TERM 4161 3177483 - 3177469 - g 71 -2.7 -4.77757 | overlap 3177470 GCGCAAAAATGAAAA CCGCG CCAGC CGCGT AGAGTGGGAACACGT endA 3177245 - 3177952 + | endonuclease I TERM 4162 3178000 - 3178022 + F 71 -4.7 -4.71061 | opp_overlap 3178001, overlap 3178001 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT rsmE 3178032 - 3178763 + | 16S rRNA methyltransferase RsmE TERM 4163 3179665 - 3179685 + G 74 -11.2 -3.1552 | opp_overlap 3179663, overlap 3179663 AGATTGAAGCAGAGT TTCCGGTG TCGAT CACCGGAA TGTTAATGGATGCCA gshB 3178776 - 3179726 + | glutathione synthase EcSMS35_3090 3179835 - 3180398 + | hypothetical protein EcSMS35_3091 3180398 - 3180814 + | putative Holliday junction resolvase EcSMS35_3092 3182018 - 3180993 - | twitching motility family protein TERM 4164 3182040 - 3182061 + GH 90 -12.3 -3.28791 | GGGACAAAATCTCAG CGGCTGCAA CGCG TTGCGGCCG TTCTCCAGAAGAAAT TERM 4165 3182124 - 3182105 - gH 83 -5.7 -5.13722 | overlap 3182106 GTCAGTAAAACAAAA CCTGCGA GCGCCA TCGCAGA AGCCATTGATGCCGG TERM 4166 3182271 - 3182259 - gH 72 -4.7 -4.65916 | opp_overlap 3182262, overlap 3182226 3182260 TGCAGTCTAATAAAA GCCGC CTG GTGGC AGAGCATTTCGACTG TERM 4167 3182631 - 3182618 - gH 72 -9.5 -3.14468 | TCGGACGATATGGAA GCCGC CATT GCGGC AGGTAGCACGATGGT EcSMS35_3093 3181991 - 3182695 + | alanine racemase EcSMS35_3094 3182713 - 3183279 + | YGGT family protein TERM 4168 3183501 - 3183486 - g 70 -3.9 -4.65895 | GTGGTGATTGAAAAA GGCGA ACTTGG CCGCC ACAAACAAATTAAAA EcSMS35_3095 3183276 - 3183566 + | hypothetical protein TERM 4169 3183800 - 3183820 + G 84 -11.1 -3.73072 | overlap 3183811 GTCTGGCGGTAGATG TGCTTGGCG GAG CGCCGGGCA TTTACTCCGCGCGTT rdgB 3183574 - 3184167 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 4170 3185022 - 3185010 - g 72 -6.2 -4.30576 | opp_overlap 3185008 3185010 TGCGTACCACCAAAA CGCG TCATC CGCG TGGTTTTATGCAGGG EcSMS35_3097 3184160 - 3185296 + | putative oxygen-independent coproporphyrinogen III oxidase TERM 4171 3185348 - 3185298 - T 79 -9.8 -3.72576 | gap 1, overlap 3185299 TTCTGGCGGAGTAAA TTTG-TATTGCCGGATGCGGCGT GCGTGT ACGCAGCATCCGGCAACAACTCA TGCGTCATCGCAAAA TERM 4172 3185344 - 3185299 - T 79 -12.1 -2.83403 | gap 2, overlap 3185298 TCTGGCGGAGTAAAT TTGTATTGCCGGATGCGGCGT GCGTGT ACGCAGCATCCGGCAA--CAA CTCATGCGTCATCGC EcSMS35_3098 3186372 - 3185365 - | hypothetical protein TERM 4173 3186250 - 3186262 + g 71 -3.3 -4.76892 | opp_overlap 3186250 ATCAAGCTTGAGAAT GCCGT GAT ACTGC TTTTTGAATTGATCT TERM 4174 3186481 - 3186461 - R 100 -14.7 -4.74103 | opp_overlap 3186462 GTCTGAAGTGAAAAA GCCCCGGCA CGA TACCGGGGC GAGGTGATTAGTACT ansB_1 3187535 - 3186489 - | L-asparaginase 2 TERM 4175 3187695 - 3187673 - R 80 -9.2 -4.12315 | opp_overlap 3187673 AAACGAAGAATTAAA CGGCATAAAA AAG TATTATGCCG TCTTAAAATAGAGGA EcSMS35_3100 3188430 - 3187711 - | hypothetical protein TERM 4176 3187788 - 3187807 + g 71 -2.8 -4.75776 | overlap 3187778 3187791 CATCTTTGCCAAACT GTTGGAAA TCTT TTTCCTGC TTTTTCCATTCGGTT TERM 4177 3188359 - 3188337 - G 73 -12 -2.82623 | overlap 3188334 3188339 GCGGGCTGACAATCA CATCGTCACG CGG CGTGACGCTG CACTGGTAGTCGGCG TERM 4178 3188401 - 3188417 + g 74 -8 -4.12188 | opp_overlap 3188400 3188401 CGCCGTCACTGAAAG TGCTGC CGCCA GCAGCA TTTTGCGCATCATAG TERM 4179 3188474 - 3188451 - R 87 -8.8 -4.44667 | overlap 3188454 TCCCTCAAGAACAAA TCAGGCCAGC ATTT GCTGGCCCCA GATTGATAACAAAGT TERM 4180 3188471 - 3188454 - R 86 -12.7 -3.19055 | overlap 3188451 CTCAAGAACAAATCA GGCCAGC ATTT GCTGGCC CCAGATTGATAACAA EcSMS35_3101 3188591 - 3188451 - | hypothetical protein EcSMS35_3102 3188940 - 3188614 - | hypothetical protein trmB 3189659 - 3188940 - | tRNA (guanine-N(7)-)-methyltransferase mutY 3189820 - 3190872 + | A/G-specific adenine glycosylase TERM 4181 3191082 - 3191062 - g 73 -4 -4.78981 | overlap 3191076 ATTAATGAAAAGAAA CTCAACAT GATGA ATGCCGAG CACCGCAAGCTGCTG EcSMS35_3105 3190900 - 3191175 + | hypothetical protein TERM 4182 3191206 - 3191179 - f 100 -6.3 -5.8096 | gap 1, opp_overlap 3191181, overlap 3191181 3191182 GATAAAAAATAAAAA CAGT-GCCGGAG CACGC CTCCGGCAACTT GCATAAAACAAACAC TERM 4183 3191203 - 3191181 - f 88 -9.1 -4.48934 | opp_overlap 3191181, overlap 3191179 3191182 TAAAAAATAAAAACA GTGCCGGAG CACGC CTCCGGCAA CTTGCATAAAACAAA TERM 4184 3191202 - 3191182 - f 86 -12.6 -3.257 | opp_overlap 3191181, overlap 3191181 3191179 AAAAAATAAAAACAG TGCCGGAG CACGC CTCCGGCA ACTTGCATAAAACAA mltC 3191239 - 3192318 + | membrane-bound lytic murein transglycosylase C TERM 4185 3192353 - 3192328 - T 70 -9 -3.19653 | overlap 3192329 CGATAATTCCACTAA CCGCCCCTGA CGATGC TCAGGGGCAA AAATGTTATCCACAT TERM 4186 3192352 - 3192329 - T 70 -10.3 -2.51471 | overlap 3192328 GATAATTCCACTAAC CGCCCCTGA CGATGC TCAGGGGCA AAAATGTTATCCACA EcSMS35_3107 3192458 - 3192324 - | hypothetical protein nupG 3192520 - 3193776 + | nucleoside permease NupG TERM 4187 3193783 - 3193822 + T 100 -15.2 -3.34013 | opp_overlap 3193792, overlap 3193792 AGCCACTAATTACGC AAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTTC TTACTTCAACACATA TERM 4188 3193792 - 3193813 + T 100 -13.7 -6.15536 | opp_overlap 3193792, overlap 3193783 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTTCTTACTT TERM 4189 3193813 - 3193792 - T 100 -11.5 -5.30616 | opp_overlap 3193792 3193783 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTTCTTACTT speC 3195958 - 3193823 - | ornithine decarboxylase, constitutive TERM 4190 3194132 - 3194143 + g 76 -3.6 -4.92363 | CGGGAAACTCTGCTG GCGG AACA TCGC TTTTTGTAGGTCTTT TERM 4191 3194864 - 3194875 + g 82 -3 -5.29782 | ACGCGCCTGTCCACG GATA TGGT TATC TTTTTTATGGATCTG TERM 4192 3195551 - 3195566 + g 77 -6.8 -4.56597 | opp_overlap 3195551 GAAATCGTAAAAATG GCGTCC GGCA GGATGC TTTTTAAAAAACGCA TERM 4193 3195800 - 3195779 - G 90 -7.3 -5.0916 | overlap 3195796 TTCGGAATACAAAAA CACCGGT AGATGAAA ACCGGTG CGCTTAAGCAACGCA TERM 4194 3196062 - 3196092 + H 74 -9.9 -3.41602 | opp_overlap 3196061 3196064 3196071 CCGACCGCCAGACAT CAGTAAAAGCAGA AACGC TCTGATTTTACTG TTGTCCTGCAGTGAG TERM 4195 3196167 - 3196152 - H 70 -7.6 -3.92005 | ACATAGAAAGGGAAA CGTTTC GCGC GAAACG GCGATAAGCGAGAGA TERM 4196 3197201 - 3197185 - H 74 -10.9 -2.62616 | opp_overlap 3197184 3197183 3197180 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4197 3197362 - 3197379 + H 71 -10.5 -2.81072 | overlap 3197361 3197364 TCAAGCGTTCATTGG GGGCCCC GGTG GGGGCTC ATTGTGTTCAGTCAG TERM 4198 3197364 - 3197377 + H 70 -9.5 -2.95007 | overlap 3197362 3197361 AAGCGTTCATTGGGG GCCCC GGTG GGGGC TCATTGTGTTCAGTC EcSMS35_3112 3197411 - 3198595 + | site-specific recombinase, phage integrase family protein TERM 4199 3198637 - 3198663 + F 100 -18.2 -3.20991 | opp_overlap 3198634 3198633 3198630 ACAATCAATAACCTT TCCCTCTGATCT GTA AGATCAGAGGGA TTCCGTTAACTTACA TERM 4200 3198920 - 3198908 - g 70 -5.5 -4.32048 | opp_overlap 3198908 3198917, overlap 3198909 3198917 CAAGAAGACTCAAAA CCGGT AAA ACCGA TGCTGTCGGTCTGGT rafR 3198745 - 3199755 + | HTH-type transcriptional regulator RafR TERM 4201 3199813 - 3199777 - f 93 -15.3 -2.89881 | opp_overlap 3199778 3199784, overlap 3199784 TATCCAGCTCACATA TCCGAAACGTTTTGGTT GAT ACCCGAAACGTTTCGGA TCAACAGTAAGGCAT TERM 4202 3200741 - 3200754 + G 72 -5.3 -4.46112 | CCCTGTACATCTCAA TACCT GGGA AGGTA TTTATTTCAATCACA rafA 3199851 - 3201977 + | alpha-galactosidase TERM 4203 3201981 - 3202007 + F 70 -7.3 -3.98842 | gap 1, opp_overlap 3201983, overlap 3201984 3201987 AGAGCTGTGTGAAGA GAGGTACGGAGC CTCA GCTCCGT-CCTG TTTCTCAATATTATC TERM 4204 3202005 - 3201983 - f 71 -9.9 -3.06815 | gap 1, opp_overlap 3201981 3201984 3201987 AGCTGTGTGAAGAGA GGTACGGAGC CTCA GCTCCGT-CC TGTTTCTCAATATTA TERM 4205 3201984 - 3202005 + F 78 -10.1 -3.57639 | opp_overlap 3201983, overlap 3201981 3201987 GCTGTGTGAAGAGAG GTACGGAGC CTCA GCTCCGTCC TGTTTCTCAATATTA TERM 4206 3201987 - 3202002 + F 72 -10.4 -2.90511 | opp_overlap 3201983, overlap 3201984 3201981 GTGTGAAGAGAGGTA CGGAGC CTCA GCTCCG TCCTGTTTCTCAATA TERM 4207 3202079 - 3202066 - g 71 -2.3 -4.89339 | opp_overlap 3202066 AAGTACGCATAAAAA TCCCG ATTT CTGGA TTTTCGGTCTGTTCT rafB 3202040 - 3203317 + | raffinose permease TERM 4208 3204035 - 3204046 + G 70 -4.4 -4.57073 | overlap 3204026 CCCCTTCCGGTTATC GGTT CCGT AACC TTTTTCAGAGCGGTG TERM 4209 3204348 - 3204365 + G 77 -9.9 -3.67976 | ATGCCAGCCATTATC CCCTGTA AGGT TACAGGG TTTGCAATTACTGAC rafD 3203317 - 3204747 + | raffinose invertase rafY1 3204942 - 3206336 + | glycoporin RafY EcSMS35_3118 3207357 - 3206914 - | IS2 transposase orfB EcSMS35_3119 3207551 - 3207276 - | IS1 transposase orfA EcSMS35_3120 3207804 - 3207580 - | hypothetical protein TERM 4210 3207784 - 3207794 + g 88 -2.6 -5.53991 | opp_overlap 3207784 AAACAGACACAGAAT TAAA ATA TTTA TTTTTTTCATAACTC TERM 4211 3210586 - 3210528 - H 100 -14.1 -4.69326 | gap 2, opp_overlap 3210530, overlap 3210521 3210529 3210530 ACAGGGAACAGAAAA TCCGGTACATCGCACGCTGTCAGTCAGAT AAT ATCTGACTGACAGCGTGCGAAGAA--AGC GCTCATTTATCAGCA TERM 4212 3210587 - 3210529 - H 100 -20.4 -3.40511 | opp_overlap 3210530, overlap 3210521 3210528 3210530 CAGGGAACAGAAAAT CCGGTACATCGCACGCTGTCAGTCAGAT AAT ATCTGACTGACAGCGTGCGAAGAAAGCG CTCATTTATCAGCAA TERM 4213 3210530 - 3210588 + H 100 -17.7 -3.01125 | gap 2, opp_overlap 3210521 3210528 3210529 3210530 AGGGAACAGAAAATC -CG-GTACATCGCACGCTGTCAGTCAGAT AAT ATCTGACTGACAGCGTGCGAAGAAAGCGC TCATTTATCAGCAAT TERM 4214 3210587 - 3210530 - H 100 -23.7 -2.63584 | gap 1, opp_overlap 3210530, overlap 3210521 3210528 3210529 AGGGAACAGAAAATC CG-GTACATCGCACGCTGTCAGTCAGAT AAT ATCTGACTGACAGCGTGCGAAGAAAGCG CTCATTTATCAGCAA TERM 4215 3210685 - 3210658 - H 89 -8.6 -4.82901 | opp_overlap 3210658 3210660 CCGGCTCTACAAAAA TAATGTCCATCA TTTT TAATGGACACTA TCGTATGAAACACCG TERM 4216 3210967 - 3210957 - g 82 -2.4 -5.40072 | CCCGTGGTAAAAAAA CGTC CCC GGCG GCCCAACTTCCCTTA TERM 4217 3211198 - 3211180 - g 71 -3.1 -4.77567 | gap 1, overlap 3211181 3211182 AGCCGGATAATAAAA TCCCG-GC CCCC GCACAGGA ACCAGAGCAGATAAA EcSMS35_3124 3210660 - 3211337 + | IS66 family transposase orfA EcSMS35_3125 3211597 - 3211418 - | hypothetical protein EcSMS35_3126 3211704 - 3213278 + | IS66 family transposase orfB TERM 4218 3213416 - 3213395 - T 82 -12.3 -2.78596 | CAGTCTGTGATTATA CCCGGCCTT TCAC AAAGCCGGG GAACTGATTCATACC EcSMS35_3127 3213680 - 3213444 - | hypothetical protein TERM 4219 3214100 - 3214136 + r 71 -8 -3.79473 | gap 2, overlap 3214102 ACACCTGCATCGTGT GTTGCTGCCACTG-C-CC TCA GGTGACAGAGGCAGCATC TTTACGTATTATAAT TERM 4220 3214102 - 3214134 + r 73 -9.2 -3.47542 | gap 2, overlap 3214100 ACCTGCATCGTGTGT TGCTGCCACTG-C-CC TCA GGTGACAGAGGCAGCA TCTTTACGTATTATA EcSMS35_3128 3216262 - 3214175 - | putative exogenous TonB-dependent siderophore receptor R4 TERM 4221 3216363 - 3216352 - H 79 -3 -5.36441 | TTTTTACATAAAAAA GTAA AAAA TTAC AAAATATTACATAAG EcSMS35_3129 3216575 - 3216859 + | hypothetical protein TERM 4222 3216902 - 3216924 + F 71 -7.7 -3.85698 | ATATTTCTACTTTGA GCGCCTC TGACTTTAT GAGGCGC TTTGTCCAGCAAACC TERM 4223 3217100 - 3217080 - f 70 -7.6 -3.90744 | opp_overlap 3217079 TGTTGTTTGAAAGAA GACTCTCA TTAAG TGAGAGCC ATCTGTAAGTATCCC TERM 4224 3217459 - 3217449 - g 74 -3.2 -4.91511 | AGGCCAGTACAAAAA TCAG GTT CCGA TTGTGCAGGTGCAAC EcSMS35_3130 3217235 - 3217588 + | hypothetical protein EcSMS35_3131 3219047 - 3218016 - | IS630 transposase EcSMS35_3132 3219366 - 3219190 - | hypothetical protein TERM 4225 3219643 - 3219674 + r 74 -3.1 -5.10497 | gap 2, opp_overlap 3219643 TCAGGGAACTTGAAA CGTAGCTTGAGCTGG CGAA CCAGA--AAGCTACG TTTTTTGAGTCAGTT TERM 4226 3220591 - 3220555 - R 77 -10.3 -3.53224 | opp_overlap 3220562, overlap 3220557 3220562 CACCTGGCTCTGAAA TACAAAACGCCCTATGA CGT TCATCAGGCGTTTTACA GACAGAAAAGTGTCA TERM 4227 3220589 - 3220557 - R 80 -10.7 -3.34398 | opp_overlap 3220562, overlap 3220555 3220562 CCTGGCTCTGAAATA CAAAACGCCCTATGA CGT TCATCAGGCGTTTTA CAGACAGAAAAGTGT TERM 4228 3220584 - 3220562 - R 89 -8.4 -4.78848 | opp_overlap 3220562, overlap 3220557 3220555 CTCTGAAATACAAAA CGCCCTATGA CGT TCATCAGGCG TTTTACAGACAGAAA TERM 4229 3221229 - 3221193 - R 73 -2.9 -5.04385 | overlap 3221194 GATATTCTGAAAAAA GCGGAGGAAATCATAAA AAA TCTATGGTCACCCCCGT TTTTGCTACACTGAT TERM 4230 3221507 - 3221538 + r 74 -7.5 -4.258 | gap 2, opp_overlap 3221510 AAGCGTCAACGGAGG TAAGCGTC-A-ACGG AGCA CCGTATTGACGCTTA TTTATTGGTGAGTAC TERM 4231 3223144 - 3223174 + r 93 -9 -5.03145 | ATGAGGTATTTCTGA CTCATGACCGTTTT TAT AATGCGGTCAGGAG TTTTTTACAACATTG EcSMS35_3136 3223529 - 3223179 - | IS66 family transposase orfB EcSMS35_3137 3223951 - 3223526 - | IS66 family transposase orfA TERM 4232 3225090 - 3225058 - R 100 -22.1 -4.17048 | opp_overlap 3225085 TGCCCTCTAAAATAA CCCACCCTGTCAGCG TAC CGCTCACAGGGTGGG GGTGACCATCTCATT amiC2 3228705 - 3227446 - | N-acetylmuramoyl-L-alanine amidase AmiC TERM 4233 3227758 - 3227768 + g 78 -8.2 -4.25104 | opp_overlap 3227758 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTCACGCCGC TERM 4234 3228039 - 3228063 + g 70 -3.5 -4.69464 | overlap 3228031 TCAGAGAGCGCAGAC GGCGAGCTATT TGC AATACCACGTC TTTTTCGCGTGTTTT EcSMS35_3141 3229997 - 3229572 - | hypothetical protein TERM 4235 3230551 - 3230541 - R 73 -4.6 -4.82901 | TGTTGTGGAGAAAAA CGGG GTC CCCA GAACTTTATTGTTCT EcSMS35_3143 3231313 - 3230570 - | IS21 transposase orfB EcSMS35_3144 3232485 - 3231313 - | IS2 transposase orfA TERM 4236 3231643 - 3231663 + g 77 -9.7 -3.59979 | overlap 3231639 3231647 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGACGAAG TERM 4237 3231647 - 3231659 + g 75 -6.9 -4.44046 | overlap 3231639 3231643 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGAC TERM 4238 3234197 - 3234211 + r 83 -11.4 -3.3506 | overlap 3234210 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA TERM 4239 3235322 - 3235302 - R 100 -15.5 -3.46848 | overlap 3235292 CAAAAGTGACCATAA GCTCTCCTG AAT CAGGAGAGC AGATTACCCCCTGGA TERM 4240 3236420 - 3236405 - R 71 -9 -3.30908 | opp_overlap 3236404 3236405, overlap 3236403 CAGTAAATATCAATA CGGTTC TGGC GAACCG CTTACTGTTCAATGG ibrB 3237533 - 3236889 - | immunoglobulin-binding regulator B ibrA 3238744 - 3237518 - | immunoglobulin-binding regulator A EcSMS35_3155 3240180 - 3240031 - | hypothetical protein EcSMS35_3156 3240501 - 3240800 + | ISEc16 transposase orfA TERM 4241 3242008 - 3241993 - f 71 -8.2 -3.72893 | opp_overlap 3241989 CACGCTTTCATCAAA GGGGGC GAAT ACCCCC GGTGTTGATGGCGTG TERM 4242 3242108 - 3242120 + F 78 -10.5 -3.6682 | CACTACCAGCCCTTG CCCGC CAG GCGGG TTTACATCCCTAAAA TERM 4243 3243427 - 3243460 + F 71 -8.9 -3.29947 | gap 1, opp_overlap 3243429 3243439 CCGGTTCGGGGAGGA GAGGCAGGGAAATAGT CCG ACTACG-CCCTGCCTC TTACTCTACTGCGTA TERM 4244 3244102 - 3244116 + F 72 -3.5 -4.93898 | CTCGGCAGGCTGGTA TGCTC CTGGC GGGCA TTTTTGTACTGATAT EcSMS35_3161 3244161 - 3244352 + | hypothetical protein TERM 4245 3245200 - 3245212 + F 80 -6.3 -4.86731 | overlap 3245207 AGAACCGGACGTGAA TTCTG CGC CAGAA TTTTCTTTCGAGGAA EcSMS35_3162 3245598 - 3245822 + | hypothetical protein TERM 4246 3245921 - 3245943 + T 80 -12.1 -2.87274 | opp_overlap 3245921 3245920, overlap 3245917 3245926 CCAGGGAAGATTAAG GGTAAGGGA GGATA TCCCTTACC TGATTGATTATGGGA TERM 4247 3245943 - 3245921 - T 79 -12.1 -2.62522 | opp_overlap 3245917 3245921 3245926, overlap 3245920 CCAGGGAAGATTAAG GGTAAGGGA GGATA TCCCTTACC TGATTGATTATGGGA sodC_2 3246475 - 3245951 - | superoxide dismutase (Cu-Zn) EcSMS35_3164 3246929 - 3247294 + | IS2 transposase orfA EcSMS35_3165 3247252 - 3248157 + | IS2 transposase orfB EcSMS35_3166 3248142 - 3248258 + | hypothetical protein EcSMS35_3167 3248430 - 3248278 - | hypothetical protein TERM 4248 3248402 - 3248384 - G 70 -3.7 -4.63218 | overlap 3248385 GCCTGTTGAATAAAA CGCCGGA TGTCT CCCGGCT CTGCAAGTAATGCTT TERM 4249 3249813 - 3249831 + H 100 -16 -4.52589 | opp_overlap 3249797 CTGAAAGCTTTCCGG CCCCCAGC CTA GCTGGGGG TTTTCTGTGCACAAA TERM 4250 3249874 - 3249849 - H 71 -4 -4.82901 | TTCTGTGCACAAAAA TCCGGAAACG AGTGAG CATTTCAGGA TTCTTAAACAGACCC TERM 4251 3251122 - 3251137 + H 80 -7.6 -4.4522 | opp_overlap 3251122 GATTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG TERM 4252 3251137 - 3251122 - H 77 -7.6 -4.40804 | opp_overlap 3251122 GATTATGCTATAAAA CATAGC CGTT GCTATG TTTGTTCTAATTTTG sitA_2 3251173 - 3252087 + | iron/manganese transport system periplasmic binding protein SitA sitB_2 3252087 - 3252914 + | iron/manganese transport system inner membrane protein SitB TERM 4253 3253463 - 3253497 + G 70 -4.3 -4.49981 | gap 1 TTCACACTGCTGGCG GTATCGACCG-TTGCA GCAT TGCAAACGGTTGGGGC TTTTCTGGTGATCTG sitC_2 3252911 - 3253768 + | iron/manganese transport system inner membrane protein SitC sitD_2 3253765 - 3254643 + | iron/manganese transport system membrane protein SitD iutA 3259434 - 3257233 - | ferric aerobactin receptor IutA TERM 4254 3257676 - 3257691 + g 81 -10.4 -3.96148 | CCACCGCACCTTCCA CGCCGT AAAT ACGGCG TTTGTCGTCCACCAC TERM 4255 3258936 - 3258972 + g 77 -2.9 -5.14965 | overlap 3258937 TAAAGCCACTTTTGG TGCCAGCCTCAAACT CCATCAT GGTTTCCGGCTGGCC TTTTTTGGTCACGAT TERM 4256 3259493 - 3259509 + r 76 -7.9 -4.19817 | opp_overlap 3259494, overlap 3259494 GTAGCGAGTTAAAGA AGCAGCC TCC GGCTGCG TTTTCCCTAGGTGCC TERM 4257 3259494 - 3259508 + r 79 -11.4 -3.11569 | opp_overlap 3259494, overlap 3259493 TAGCGAGTTAAAGAA GCAGCC TCC GGCTGC GTTTTCCCTAGGTGC TERM 4258 3259508 - 3259494 - R 91 -11.4 -3.9693 | opp_overlap 3259494 3259493 TAGCGAGTTAAAGAA GCAGCC TCC GGCTGC GTTTTCCCTAGGTGC iucD 3260793 - 3259516 - | L-lysine 6-monooxygenase IucD TERM 4259 3260692 - 3260678 - G 71 -2.8 -4.7373 | GGATGCCAGGAAAAA TGAGGA TGT TCATCA AAGAAGAGACAGTCC iucC 3262532 - 3260790 - | aerobactin siderophore biosynthesis protein IucC TERM 4260 3260955 - 3260945 - G 70 -4.6 -4.54477 | TGAAAAGTGAGAAAA GCGC AAA ACGC TCTGACATTTGTGGA TERM 4261 3262187 - 3262199 + g 81 -10.5 -3.57561 | opp_overlap 3262172 GGTCACTGGCGCTCA GCCCG CGA CGGGC TTTCAGCAGTTGCAG TERM 4262 3262576 - 3262556 - R 89 -11.9 -3.61715 | GACCTCCGTGAAGAA GTGATGACG ATC CGCCATCAC CATGCGCGAGCGTTT iucB 3263479 - 3262532 - | aerobactin siderophore biosynthesis protein IucB iucA 3265204 - 3263480 - | aerobactin siderophore biosynthesis protein IucA TERM 4263 3264494 - 3264484 - G 81 -6.8 -4.72272 | GTCCTTTAGCAAAAA GTGC CTG GCAC CACACCTGCTGCAAA shiF 3265340 - 3266533 + | transport protein ShiF TERM 4264 3268710 - 3268729 + T 79 -12.2 -2.74019 | opp_overlap 3268710 TGCATTTTCTTTAAA GTGACCGT CAGG ACGGTCAC TGATTACCCATTCTG TERM 4265 3268729 - 3268710 - T 88 -12.2 -3.53811 | opp_overlap 3268710 TGCATTTTCTTTAAA GTGACCGT CAGG ACGGTCAC TGATTACCCATTCTG TERM 4266 3269966 - 3269982 + T 75 -5.1 -4.78839 | CCAATCCAGAACTGG CGGCT GGCAATG AGCCG TTTTATTATCGAGTT TERM 4267 3270811 - 3270840 + T 80 -12.1 -2.92463 | opp_overlap 3270815 ATCTCTGTACCTCAT TATATCCCGGGGG ACTT CCCCCGGGACAGA TATCTAAATCCTGAC TERM 4268 3270836 - 3270815 - T 100 -17.3 -2.79796 | opp_overlap 3270811 CTGTACCTCATTATA TCCCGGGGG ACTT CCCCCGGGA CAGATATCTAAATCC EcSMS35_3187 3271968 - 3270859 - | putative immunoglobuling-binding protein EcSMS35_3188 3272143 - 3271994 - | hypothetical protein TERM 4269 3272423 - 3272398 - R 71 -3.9 -4.87665 | overlap 3272399 3272400 TTTGAGCTACAAAAA TTTCACGTGGC ACGC ACCACGTGATC CGTAGAAAAGCCTCT TERM 4270 3272421 - 3272400 - R 74 -10.9 -2.70788 | overlap 3272399 3272398 TGAGCTACAAAAATT TCACGTGGC ACGC ACCACGTGA TCCGTAGAAAAGCCT TERM 4271 3272456 - 3272481 + r 87 -6.7 -5.28176 | opp_overlap 3272457, overlap 3272457 TTACGAATTTCGTAA ACCGCACGTCT GTCT GGTCGTGCGGA TTTTTTATCCGTCAA TERM 4272 3272480 - 3272457 - R 77 -9.5 -3.58037 | opp_overlap 3272457 3272456 TACGAATTTCGTAAA CCGCACGTC TGTCTG GTCGTGCGG ATTTTTTATCCGTCA TERM 4273 3272457 - 3272480 + r 80 -10.2 -3.76182 | opp_overlap 3272457, overlap 3272456 TACGAATTTCGTAAA CCGCACGTCT GTCT GGTCGTGCGG ATTTTTTATCCGTCA EcSMS35_3189 3272725 - 3272612 - | hypothetical protein TERM 4274 3272682 - 3272705 + g 100 -9.6 -5.33866 | opp_overlap 3272682 CCATTTTTTACTACA CCCTCTGACA GAAT TTTCAGAGGG TTTTTTATCAGTTTC EcSMS35_3190 3272848 - 3272967 + | hypothetical protein TERM 4275 3273001 - 3272968 - T 74 -9.6 -3.28712 | opp_overlap 3272970, overlap 3272970 GTTTTTGCTCCATAA CAGGCGCCCACC AGTTTGAAAA GGTGGGCACCTA CGTTACCAATACTGG TERM 4276 3272999 - 3272970 - T 74 -10 -3.21276 | opp_overlap 3272970, overlap 3272968 TTTTGCTCCATAACA GGCGCCCACC AGTTTGAAAA GGTGGGCACC TACGTTACCAATACT TERM 4277 3274760 - 3274748 - T 100 -7.7 -5.55855 | GGGAAAAAAACAAAA CCACT TAA AGTGG GGATACCTGACGACC TERM 4278 3275052 - 3275014 - T 100 -14 -3.32844 | opp_overlap 3275021, overlap 3275042 TCGTTGACTGCACAA CAGCGCTGTTCACTGA GCTGTAA TCAATGTACAGCGCTG TACCGGGCGATGGGT EcSMS35_3195 3275775 - 3275023 - | hypothetical protein EcSMS35_3196 3276008 - 3275772 - | AlpA family transcriptional regulator EcSMS35_3197 3276649 - 3276077 - | hypothetical protein TERM 4279 3276971 - 3276940 - R 74 -6.7 -4.3739 | gap 2, overlap 3276943 3276948 GACTTTTTCAGAAAA CGAGCTAAGGGCGTC AGCC AACGCCCTTA-C-CG TGGCATAAGCTCAGG TERM 4280 3276970 - 3276943 - R 78 -10.6 -3.1733 | overlap 3276940 3276948 TTTTTCAGAAAACGA GCTAAGGGCGTC AGCC AACGCCCTTACC GTGGCATAAGCTCAG TERM 4281 3276965 - 3276948 - R 70 -9.1 -3.20109 | overlap 3276943 3276940 CAGAAAACGAGCTAA GGGCGTC AGCC AACGCCC TTACCGTGGCATAAG EcSMS35_3198 3277741 - 3277010 - | hypothetical protein EcSMS35_3199 3278235 - 3278077 - | hypothetical protein TERM 4282 3278192 - 3278180 - G 74 -3.4 -4.97666 | AACACACCATAAAAA CGAT TAACC ATCG ATAACGTAAACCTCA EcSMS35_3200 3278456 - 3278337 - | hypothetical protein EcSMS35_3201 3280390 - 3279260 - | hypothetical protein TERM 4283 3279753 - 3279765 + g 77 -6.3 -4.71382 | opp_overlap 3279744 3279753 3279752, overlap 3279744 CAAACAGACAAAACT GTCTT ATA AAGAC TTTTTGAATCATTAT TERM 4284 3280548 - 3280530 - H 72 -7.4 -4.0616 | overlap 3280526 TACCTGAATGATAAA CCGGATTA GTG TGATCCGG TTCAGCGAAATCAAC EcSMS35_3202 3280575 - 3281459 + | putative GTPase EcSMS35_3203 3281478 - 3281633 + | hypothetical protein TERM 4285 3282267 - 3282278 + G 74 -5.8 -4.52857 | CATCCACAGTCTGGT CGCT GAAG AGCG TTTTATCTCCGCCCT EcSMS35_3204 3281662 - 3282342 + | hypothetical protein EcSMS35_3205 3282385 - 3283167 + | hypothetical protein EcSMS35_3206 3283173 - 3283406 + | hypothetical protein TERM 4286 3283429 - 3283454 + F 100 -16.9 -5.04601 | CATTTCATCCATCAG GCCGCGTCTTC TCCG GGAGACGCGGC TTTTTCGTTTATACC EcSMS35_3207 3283496 - 3284314 + | hypothetical protein EcSMS35_3208 3284396 - 3284875 + | antirestriction protein EcSMS35_3209 3284891 - 3285367 + | RadC family DNA repair protein EcSMS35_3210 3285430 - 3285651 + | hypothetical protein TERM 4287 3285984 - 3285947 - g 74 -8.5 -4.00042 | gap 1 CTGCTGATGAAACAA CTGGAACTCATGCTCACC AGC GGTGAAC-TGAATCCCCG CCATCAGCATACCGT EcSMS35_3211 3285851 - 3286105 + | putative antitoxin module of toxin-antitoxin system EcSMS35_3212 3286152 - 3286529 + | hypothetical protein EcSMS35_3213 3286526 - 3287014 + | hypothetical protein EcSMS35_3214 3287026 - 3287223 + | hypothetical protein TERM 4288 3287253 - 3287275 + F 100 -12.7 -4.65153 | ACTTCATTCCACTGA CGCCAGCCT GAACA GGGCTGGCG TTTTCATTTATCTGC EcSMS35_3215 3287308 - 3288174 + | hypothetical protein EcSMS35_3216 3288246 - 3288509 + | CC2985 family addiction module antidote protein TERM 4289 3289112 - 3289128 + F 86 -7.2 -5.10154 | opp_overlap 3289112 CACTATTCTAAAGAA CCCGCT CACAA GGCGGG TTTTTGCTTTTGGAT EcSMS35_3217 3289323 - 3289478 + | hypothetical protein EcSMS35_3218 3289768 - 3289646 - | hypothetical protein TERM 4290 3289955 - 3289968 + H 83 -3.9 -5.40004 | opp_overlap 3289955 TTACAAGGAAATAAT CAATT GATA AATTG TTTTTTGGTTTAATA TERM 4291 3290686 - 3290672 - g 70 -4.2 -4.65895 | opp_overlap 3290673, overlap 3290673 TCCTTCACTGAAAAA TTTCGG CAA CCGAAT TATCGCCATTACCAA kpsF 3290253 - 3291272 + | polysialic acid capsule expression protein KpsF kpsE 3291344 - 3292492 + | polysialic acid capsule export inner-membrane protein KpsE kpsD 3292516 - 3294192 + | polysialic acid capsule transport protein KpsD kpsU 3294202 - 3294942 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase KpsU TERM 4292 3294976 - 3295027 + G 81 -13.3 -2.73875 | opp_overlap 3294990, overlap 3294989 3294990 GCATCTGGCGTATTC CGCATCTGGAGAAA-TTTCTGGCGC AACC GTGCCAGAAACTTTCTCT-GCTGCG TCCTGTTCCGCAAAA TERM 4293 3294989 - 3295014 + G 77 -8.3 -4.0942 | opp_overlap 3294990, overlap 3294976 3294990 TCCGCATCTGGAGAA ATTTCTGGCGC AACC GTGCCAGAAAC TTTCTCTGCTGCGTC TERM 4294 3295013 - 3294990 - g 78 -9.6 -3.87815 | opp_overlap 3294989 3294976 3294990 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGT TERM 4295 3294990 - 3295013 + G 75 -11.8 -3.0517 | opp_overlap 3294990, overlap 3294989 3294976 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGT TERM 4296 3295098 - 3295043 - g 74 -7.4 -4.07568 | gap 1, overlap 3295044 TCCTGTTCCGCAAAA CGTCGA-TGCTATCGCCGTGTGGGGAC ATC GTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCCGCGG TERM 4297 3295780 - 3295800 + G 77 -6.1 -4.60041 | TATCTGCCCGACGCG GTTCTGCCA CGC TGGAGGAAC TTTTTGCCGCTGCAT TERM 4298 3296924 - 3296904 - g 100 -12.7 -5.44721 | opp_overlap 3296902 3296901 ATTACCCGAAAAAAA GCGGTAATA CGC TATTACCGC AAATTAATTATGTTC kpsC 3294939 - 3296972 + | polysialic acid capsule polysaccharide export protein KpsC TERM 4299 3297052 - 3297065 + G 79 -3.7 -5.09225 | TATCTGCTATTGCAG GGGCC AATG GGACC TTTTTTCAATGACGT kpsS 3296995 - 3298200 + | polysialic acid capsule biosynthesis protein KpsS neuS 3301065 - 3299836 - | polysialic acid capsule biosynthesis polysialyltransferase NeuS TERM 4300 3299952 - 3299964 + g 79 -4.8 -4.99435 | GACGCAGCGTATTAG TCCC TTTTT GGGA TTTTTCATTATTACA TERM 4301 3300413 - 3300423 + g 86 -4 -5.45802 | opp_overlap 3300401 AACTCAAAAAATTTT TTTG CAT CAAA TTTTTCTTTTAACAA TERM 4302 3300915 - 3300934 + g 100 -2.2 -5.93252 | opp_overlap 3300915 ATTGCCCTAAATGAA CAACAATA AAAA TATTTTTG TTTTTTATTTTTAAA TERM 4303 3301003 - 3300991 - G 91 -5.5 -5.32944 | TTTAGAATTAAAAAA CCATG AGT CACGG AAAAACCCAATTGGA neuE 3302230 - 3301055 - | polysialic acid capsule biosynthesis protein NeuE TERM 4304 3301170 - 3301160 - GR 71 -2.6 -5.02231 | overlap 3301168 CAAAAAGATCAAAAA TAAT ATA ATTA ATGTAGATCTTTTAA TERM 4305 3302079 - 3302069 - GR 72 -5.4 -4.56775 | ATTTTTTTTTAAAAA CTCT TGT AGAG AATTATCCAAGCAGC neuC 3303371 - 3302196 - | polysialic acid capsule biosynthesis protein NeuC neuA 3304624 - 3303368 - | polysialic acid capsule biosynthesis N-acylneuraminate cytidylyltransferase NeuA neuB 3305664 - 3304624 - | polysialic acid capsule biosynthesis sialic acid synthase NeuB neuD 3306284 - 3305661 - | polysialic acid capsule biosynthesis protein NeuD TERM 4306 3306004 - 3305972 - G 90 -7.1 -5.1356 | opp_overlap 3305998 TTTTACCAATAAAAA TTCCATCACCCAGTA TAA TATTTGGTGATAGAA TAGCAGTTTTATCTA kpsT 3306993 - 3306334 - | polysialic acid capsule biosynthesis transport protein KpsT kpsM 3307766 - 3306990 - | polysialic acid capsule biosynthesis transport protein KpsM TERM 4307 3307915 - 3307904 - R 73 -3 -5.04987 | opp_overlap 3307904, overlap 3307906 AATAGCCGCAAAAAA TTTC AGCA GAAA TTATTTCCGCAGGGA TERM 4308 3308036 - 3308053 + r 83 -5.7 -5.31855 | opp_overlap 3308039 TTTAGAATGTAGAGT TAATTTC TCAG GAAATTA TTTTTGTTATTACTG EcSMS35_3236 3309999 - 3308800 - | IS200 transposase orfB TERM 4309 3309339 - 3309355 + g 72 -7.9 -3.98907 | TGCGGCTTAACTGTC GCTGGAG TCT CGCCAGC TTCTTCTGATTTTTC EcSMS35_3237 3310058 - 3310462 + | IS200 transposase orfA gspM 3311238 - 3310702 - | general secretion pathway protein GspM gspL 3312418 - 3311240 - | general secretion pathway protein GspL TERM 4310 3311488 - 3311509 + g 71 -2.3 -5.00884 | overlap 3311493 CTGCGAGCAGCCGGG TATCGTC GGCCTGTG GGCGATA TTTTTTCAGCGCCAT gspK 3313392 - 3312415 - | general secretion pathway protein GspK TERM 4311 3313157 - 3313139 - G 100 -10.2 -5.03314 | opp_overlap 3313139 3313138, overlap 3313151 GGCAGTGGGAAAAAA CGCGGGCC AGA AGCCCACG GTTGTGCCAGATGCA gspJ 3313997 - 3313392 - | general secretion pathway protein GspJ TERM 4312 3313877 - 3313902 + g 81 -9.7 -3.90318 | overlap 3313866 GATCGTGTCCGGCGA CGGCGCTATTC ACGC GAGTAACGCCG TTTGTCACCTGCTGC TERM 4313 3313954 - 3313943 - G 77 -5.8 -4.67353 | CCAGTGAGGCAAAAA TGGC TATC GCCA CCAGCATTTCCAGTA gspI 3314365 - 3313994 - | general secretion pathway protein GspI TERM 4314 3314331 - 3314320 - G 77 -5.8 -4.62783 | opp_overlap 3314320 3314319 CAGCCAGCGCAAAAA TCGC CAGC GCGA GTATTACTTCCAGCA gspH 3314925 - 3314362 - | general secretion pathway protein GspH TERM 4315 3314692 - 3314676 - G 93 -12.3 -3.85817 | overlap 3314662 ACCGGGTCGCAGAAA CGGGCAA CCA TTGCCCG TGACGACGCTGCATA gspG 3315384 - 3314929 - | general secretion pathway protein GspG TERM 4316 3315232 - 3315255 + g 72 -5.3 -4.46072 | gap 1 CAGCGCCACGATATC GCTGAT-GGC TTTTT GCCGATCGGC TTTCTCTTTGTTGCC gspF 3316624 - 3315401 - | general secretion pathway protein GspF TERM 4317 3315645 - 3315663 + g 75 -11.6 -2.84098 | opp_overlap 3315634, overlap 3315642 AACAGGCGCAGATCC GCCAGCGC GGC GCGCAGGC TGCTTCCTTCGCGGA TERM 4318 3315825 - 3315804 - G 70 -4.3 -4.57341 | overlap 3315805 AACGTGCGGGAAAAA CGCGCCG TATTCAGT CCGCGCG CAACACGCCCCGTCA gspE 3318117 - 3316624 - | general secretory pathway protein GspE TERM 4319 3317433 - 3317446 + g 75 -4.5 -4.83169 | overlap 3317415 3317434 CCAGACGCTCCAGCG TCAGG CGGG CCTGG TTTTTGTCCAGCAGT TERM 4320 3317856 - 3317836 - G 83 -5.3 -5.05782 | opp_overlap 3317838, overlap 3317838 AGCGAGGGTAAAAAA GTCCTCGGC GGA ACCGAGATC TTCCATCAGCTGGCG gspD 3320177 - 3318117 - | general secretion pathway protein GspD TERM 4321 3319964 - 3319975 + g 72 -4.4 -4.68103 | CCTGAACGCCCGGCC CCAT AATG ATGG TTTTATTAAGGTTAG TERM 4322 3320104 - 3320082 - G 76 -10.6 -3.36492 | opp_overlap 3320076 3320075 CGGTGAACTGCATAA TGCCGCTG CCAGCAC CAGCGGCA GTAAACGCTTTTTTG gspC 3321166 - 3320207 - | general secretion pathway protein GspC TERM 4323 3320558 - 3320569 + g 84 -3.6 -5.1861 | overlap 3320557 3320556 AGCTTGCTTTGCTTC GTCG CTGA CGGC TTTTTTGCTGGTCAC TERM 4324 3320917 - 3320929 + g 70 -6.2 -4.16016 | CGAACGCTTTTGCAT CCGC ACGGA GCGG TTTATTCGCCGATGG TERM 4325 3321150 - 3321136 - G 77 -8.6 -4.13872 | ATTGAATGAGATAAA TTCGTG CGT CACGAA AAACAACCCGCGCCA EcSMS35_3249 3321594 - 3321184 - | putative lipoprotein TERM 4326 3321487 - 3321502 + g 70 -4.6 -4.50058 | overlap 3321488 TTGCGCCTGTTTTTT CGCCAG TAAA CTGGCA TTTTCATTATGGCTG pppA 3322469 - 3321660 - | leader peptidase PppA TERM 4327 3322504 - 3322516 + r 71 -9.1 -3.37796 | TAACTTGCTGGATGC GGCGT AAA ACGCC TTATCCGTCCTACGG TERM 4328 3322586 - 3322619 + r 100 -13.1 -4.00042 | opp_overlap 3322586 3322583 TAGGCCCGATAAGCA GGCGCATCGGGCAAA TGTG TTAACCCGGTGCGCC TTATTTCATGCCGGA TERM 4329 3322619 - 3322586 - R 85 -13.1 -2.8294 | opp_overlap 3322586, overlap 3322583 TAGGCCCGATAAGCA GGCGCATCGGGCAAA TGTG TTAACCCGGTGCGCC TTATTTCATGCCGGA EcSMS35_3251 3327223 - 3322667 - | hypothetical protein TERM 4330 3323431 - 3323449 + g 72 -7.5 -3.86897 | overlap 3323404 CGATGGAGATCTGCA CATCGTT GGTGA AACGATG TTTGTGCCCCGTCAA TERM 4331 3327664 - 3327706 + r 100 -13 -3.54424 | opp_overlap 3327662 3327668 3327672, overlap 3327668 3327672 TAAGACAGAATAATG TAAATGAAGCCGGATGAT ATTAACG ATCATCCGGCTTTATTGA TTTACGAGACTAACA TERM 4332 3327668 - 3327702 + r 100 -13.8 -3.51411 | opp_overlap 3327662 3327668 3327672, overlap 3327664 3327672 ACAGAATAATGTAAA TGAAGCCGGATGAT ATTAACG ATCATCCGGCTTTA TTGATTTACGAGACT TERM 4333 3327702 - 3327668 - R 91 -11.6 -3.88178 | opp_overlap 3327668 3327664 3327672, overlap 3327662 3327672 ACAGAATAATGTAAA TGAAGCCGGATGAT ATTAACG ATCATCCGGCTTTA TTGATTTACGAGACT TERM 4334 3327698 - 3327672 - R 95 -12.4 -3.58779 | opp_overlap 3327668 3327664 3327672, overlap 3327668 3327662 AATAATGTAAATGAA GCCGGATGAT ATTAACG ATCATCCGGC TTTATTGATTTACGA TERM 4335 3327672 - 3327698 + r 100 -12.4 -4.39696 | opp_overlap 3327672 3327668 3327662, overlap 3327668 3327664 AATAATGTAAATGAA GCCGGATGAT ATTAACG ATCATCCGGC TTTATTGATTTACGA glcA 3329390 - 3327708 - | glycolate permease GlcA TERM 4336 3328254 - 3328241 - G 81 -4.5 -5.06414 | overlap 3328227 3328244 TCGCCGCAATAAAAA TAGCG GTGC CGCCA GCCGAGAGGGGGTCG TERM 4337 3328560 - 3328572 + g 72 -5.5 -4.56597 | TTGTCCCATGCTGAT TGCCG TTT CGGTA TTTTTCGGCCGCCAG TERM 4338 3328894 - 3328884 - G 72 -8.2 -3.794 | GCCCAACGCACCAAA CGCC ACC GGCG CAGTATTGGCAATCA TERM 4339 3329731 - 3329706 - R 82 -12.6 -2.83164 | opp_overlap 3329706 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT TERM 4340 3329706 - 3329731 + r 93 -10.4 -5.04987 | opp_overlap 3329706 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT glcB 3331916 - 3329745 - | malate synthase G TERM 4341 3331563 - 3331590 + g 70 -10.6 -2.82803 | gap 1, opp_overlap 3331565, overlap 3331562 3331565 GTTCATTGCCGGAAC CACCAGCTGCGGC CCC GCC-TGGCTGGTG ATTTCGCTGTCAATA EcSMS35_3254 3332342 - 3331938 - | GlcG protein TERM 4342 3332144 - 3332159 + g 72 -7.5 -3.96327 | TTTCACGACGCCCCA GCGCG GCGGTA CGCGC TTTCTCCTGGGAGAT glcF 3333570 - 3332347 - | glycolate oxidase, iron-sulfur subunit GlcF glcE 3334633 - 3333581 - | glycolate oxidase, subunit GlcE glcD 3336123 - 3334633 - | glycolate oxidase, subunit GlcD glcC 3336383 - 3337153 + | Glc operon transcriptional activator EcSMS35_3259 3338371 - 3337229 - | hypothetical protein TERM 4343 3337784 - 3337795 + g 90 -4.4 -5.40072 | CACCTTTTTGCGTAC CTGA TCCA TCAG TTTTTTTAGCGCCGG TERM 4344 3338205 - 3338216 + g 74 -5.8 -4.56597 | TGCCAGATGATATGG TCCG TCCC CGGA TTTTTCGCAGACAAA TERM 4345 3338975 - 3338952 - g 91 -7.4 -5.12707 | gap 1, opp_overlap 3338957 CTAAACCTGAAAAAA GGCGATC-GCG TGG CGCTGATTGCC GAAACCAGTAGCGGG TERM 4346 3340201 - 3340213 + G 70 -4.1 -4.63218 | CGGAAATTCATTCTG GCGAT GCG ATTGC TTTTGTTACCGCCCA EcSMS35_3260 3338775 - 3340466 + | AMP-binding enzyme EcSMS35_3261 3340463 - 3341377 + | NAD dependent epimerase/dehydratase family protein EcSMS35_3262 3341409 - 3341657 + | putative acyl carrier protein EcSMS35_3263 3341657 - 3342829 + | putative serine palmitoyltransferase TERM 4347 3342836 - 3342862 + T 100 -18 -3.99878 | opp_overlap 3342830 3342831 AAGCAGTAATGTGAG CCCGCTGTGGTG TTG CGCCACGGCGGG TTTAATGTTGTCTGT EcSMS35_3264 3343943 - 3342864 - | YjgP/YjgQ permease EcSMS35_3265 3345010 - 3343940 - | YjgP/YjgQ permease TERM 4348 3344385 - 3344403 + g 73 -11.8 -2.7083 | overlap 3344380 AGAAGATAGGCGGTC CCGTTATG CAA CATAACGG TCGGTTTCTCAGGTG EcSMS35_3266 3345601 - 3345041 - | hypothetical protein EcSMS35_3267 3346437 - 3345613 - | hypothetical protein TERM 4349 3346024 - 3346014 - G 70 -4.6 -4.45117 | GAGAGCTTAAATAAA CCCG TAA CAGG TTGCCGTAATACGAC TERM 4350 3346105 - 3346092 - G 86 -3.8 -5.41746 | AACGCCCCAAAAAAA CGGT CGTTTT ACCG AATAAAAATCCGGCC EcSMS35_3268 3347786 - 3346437 - | putative polysaccharide biosynthesis protein EcSMS35_3269 3348590 - 3347832 - | hypothetical protein EcSMS35_3270 3349320 - 3348622 - | putative lipoprotein EcSMS35_3271 3349509 - 3350201 + | hypothetical protein TERM 4351 3350243 - 3350209 - T 100 -13.7 -4.68994 | opp_overlap 3350215 ATCACTAGTGAAAAA TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA GGAAGGTTAAATCAA TERM 4352 3350215 - 3350237 + T 80 -9.1 -4.08692 | opp_overlap 3350209 AGTGAAAAATGGAAA TGCCCGATC GCCAG GACCGGGCA TTTTCAGGAAGGTTA pitB 3351749 - 3350250 - | low-affinity inorganic phosphate transporter 2 EcSMS35_3273 3351809 - 3351949 + | hypothetical protein TERM 4353 3352036 - 3351978 - T 76 -10 -3.2779 | gap 2, opp_overlap 3351978, overlap 3351990 TATATAAATATTGAA TGTTTTGATTAATCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGG-TTG-CCACAACA TGTATTACTTTTTCA TERM 4354 3351978 - 3352036 + T 76 -10 -3.30457 | gap 2, opp_overlap 3351978 3351990 TATATAAATATTGAA TGTTTTGATTAATCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGG-TTGC-CACAACA TGTATTACTTTTTCA TERM 4355 3352026 - 3351990 - T 100 -16.8 -3.14881 | opp_overlap 3351978, overlap 3351978 GAATGTTTTGATTAA TCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGGT TGCCACAACATGTAT gsp 3353900 - 3352041 - | glutathionylspermidine amidase/glutathionylspermidine synthase TERM 4356 3353574 - 3353552 - G 78 -9.1 -3.88946 | gap 1 TATCCCAGATAAGAA GCGCGC-CCG CGAC CGGTGCACGC GGCGAGCCATTAGGA EcSMS35_3275 3354105 - 3354971 + | glutathione S-transferase hybG 3355289 - 3355041 - | hydrogenase assembly chaperone HybG hypA1 3355643 - 3355302 - | hydrogenase nickel insertion protein HypA hybE 3356124 - 3355636 - | hydrogenase-2 operon protein HybE TERM 4357 3355686 - 3355668 - G 83 -12.4 -3.34398 | opp_overlap 3355667, overlap 3355639 3355666 TCCTGCGGCCAAATA GCAGGGCA CGA CGCCCTGC GTGTGGTACATCCGG hybD2 3356611 - 3356117 - | hydrogenase 2 maturation peptidase TERM 4358 3356258 - 3356273 + g 70 -4.6 -4.57569 | TGATTCCGGGATCAC GCCGAC CAGG GTCAGC TTTTTCGGAAACTCG hybC 3358314 - 3356611 - | hydrogenase-2, large subunit TERM 4359 3358160 - 3358174 + g 72 -4.9 -4.61633 | opp_overlap 3358152, overlap 3358163 3358167 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 4360 3358333 - 3358344 + r 77 -4.4 -5.07652 | overlap 3358322 3358327 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3359489 - 3358311 - | Ni/Fe-hydrogenase 2 b-type cytochrome subunit hybA 3360465 - 3359479 - | hydrogenase-2 electron transfer subunit hyb0 3361586 - 3360468 - | hydrogenase-2 small chain EcSMS35_3284 3361570 - 3361698 + | hypothetical protein EcSMS35_3285 3362062 - 3361775 - | hypothetical protein TERM 4361 3362074 - 3362102 + r 70 -7 -4.07568 | gap 1, overlap 3362075 TCATCGTTCACCTCA T-TCGCTATATAT TGTC ATATATAGCGATA TTTTAGGCAAAGAAC TERM 4362 3362075 - 3362100 + r 89 -12.1 -3.63744 | overlap 3362074 CATCGTTCACCTCAT TCGCTATATAT TGTC ATATATAGCGA TATTTTAGGCAAAGA EcSMS35_3286 3363068 - 3362181 - | dienelactone hydrolase family protein EcSMS35_3287 3363225 - 3364265 + | aldo/keto reductase family oxidoreductase TERM 4363 3364297 - 3364277 - T 100 -16.1 -3.62775 | overlap 3364266 ATGACCTGTTAATAA CGGGCGCGA GAA CCGCGCCCG AATCAGATCAGTGAT EcSMS35_3288 3364799 - 3364305 - | hypothetical protein EcSMS35_3289 3364990 - 3365874 + | short chain dehydrogenase/reductase family oxidoreductase TERM 4364 3365876 - 3365908 + T 100 -8.4 -5.34381 | opp_overlap 3365879, overlap 3365859 3365877 3365879 AGCATTTAGGTTAAA AAATGCCCGGTTGT GAAAA GCAACCGGGCATCA TTTTTATTTCGCTTT TERM 4365 3365877 - 3365907 + T 93 -11.9 -3.78189 | opp_overlap 3365879, overlap 3365859 3365876 3365879 GCATTTAGGTTAAAA AATGCCCGGTTGT GAAAA GCAACCGGGCATC ATTTTTATTTCGCTT TERM 4366 3365879 - 3365905 + T 100 -14.5 -3.45131 | opp_overlap 3365879, overlap 3365859 3365877 3365876 ATTTAGGTTAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTTTTATTTCGC TERM 4367 3365905 - 3365879 - T 100 -13.8 -5.05782 | opp_overlap 3365859 3365879 3365877 3365876 ATTTAGGTTAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTTTTATTTCGC exbD 3366337 - 3365912 - | TonB system transport protein ExbD exbB 3367078 - 3366344 - | TonB-system energizer ExbB TERM 4368 3367327 - 3367317 - H 75 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 4369 3367470 - 3367458 - g 71 -3.3 -4.74103 | overlap 3367461 TGTGGAAGCCAAAAA GCACG CGA CACGC AATCGCGCCAATGGC metC 3367330 - 3368517 + | cystathionine beta-lyase TERM 4370 3369019 - 3369045 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT EcSMS35_3293 3368657 - 3369316 + | hypothetical protein TERM 4371 3369325 - 3369354 + T 72 -7.8 -3.91911 | overlap 3369327 CGCCTGACGATTTTC CCCGTTCCCGGT TGCTGT ACCGGGAACGTA TTTAATTCCCCTGCA TERM 4372 3369327 - 3369352 + T 100 -14.8 -3.5486 | overlap 3369325 CCTGACGATTTTCCC CGTTCCCGGT TGCTGT ACCGGGAACG TATTTAATTCCCCTG EcSMS35_3294 3370255 - 3369356 - | AraC family transcriptional regulator TERM 4373 3369491 - 3369515 + g 76 -10.7 -3.29144 | ACTGGCTTTCATGCC GTCGTGGATGA TCA TCATCCGCGCC TTATGCAGACGGTAA EcSMS35_3295 3370398 - 3370252 - | hypothetical protein TERM 4374 3371352 - 3371337 - g 75 -4.6 -4.8622 | CTGTGGAATGAAAAA CGCGAT ACCA AGCGCG CTAAGCTGCTGCAAT yqhD 3370449 - 3371612 + | alcohol dehydrogenase yqhD TERM 4375 3371699 - 3371670 - f 80 -10.7 -3.36968 | opp_overlap 3371673, overlap 3371672 3371673 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 4376 3371697 - 3371672 - f 91 -13.3 -3.25192 | opp_overlap 3371673, overlap 3371670 3371673 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 4377 3371673 - 3371696 + F 100 -16.8 -3.25823 | opp_overlap 3371672 3371670 3371673 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 4378 3371696 - 3371673 - f 100 -16.8 -2.54794 | opp_overlap 3371673, overlap 3371672 3371670 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3371717 - 3372544 + | 2,5-didehydrogluconate reductase A TERM 4379 3372556 - 3372586 + F 72 -7.4 -4.10429 | overlap 3372538 3372557 CTAACGGGCAAATTC TCCCGGTGGCGGTA ATG TTCCGCTACCGGAC TTTTCAGAAATCATT TERM 4380 3372557 - 3372585 + F 76 -10.9 -3.05775 | overlap 3372538 3372556 TAACGGGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT EcSMS35_3298 3372744 - 3373670 + | hypothetical protein EcSMS35_3299 3373721 - 3373978 + | putative lipoprotein TERM 4381 3373985 - 3374015 + T 93 -10.4 -5.0538 | opp_overlap 3373987, overlap 3373987 GCAGAATGATAAAAA AATCCCCGGCAGCA TTC TGTTACCGGGGATA TTTTTTAACGTCCAA TERM 4382 3373987 - 3374013 + T 100 -13 -4.15748 | opp_overlap 3373987, overlap 3373985 AGAATGATAAAAAAA TCCCCGGCAGCA TTC TGTTACCGGGGA TATTTTTTAACGTCC TERM 4383 3374013 - 3373987 - T 100 -13 -5.73339 | opp_overlap 3373987 3373985 AGAATGATAAAAAAA TCCCCGGCAGCA TTC TGTTACCGGGGA TATTTTTTAACGTCC EcSMS35_3300 3376239 - 3374020 - | radical SAM domain-containing protein TERM 4384 3374079 - 3374091 + g 90 -4.8 -5.44119 | TCTGCAGGCGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC EcSMS35_3301 3376491 - 3377240 + | GntR family transcriptional regulator TERM 4385 3378973 - 3378962 - g 95 -5.8 -5.41941 | TAAATGAAATAAAAA TCGC CTTT GCGA ATATAAAAAACAAAG EcSMS35_3302 3377563 - 3379035 + | mannitol dehydrogenase EcSMS35_3303 3379032 - 3380048 + | zinc-binding dehydrogenase family protein TERM 4386 3380513 - 3380523 + G 85 -8.2 -4.58395 | overlap 3380504 TGGCTCCCCATGGCG GCGC CGA GCGC TTTTTGGGAACTAAC EcSMS35_3304 3380059 - 3381069 + | malate/L-lactate dehydrogenase family protein EcSMS35_3305 3381142 - 3382125 + | TRAP transporter solute receptor DctP family protein TERM 4387 3382134 - 3382150 + F 84 -9.4 -4.25283 | TATGTAACCCTAATG GGCAGG TAATT CCTGCC TTTTCATGGAAGACT EcSMS35_3307 3382660 - 3383964 + | TRAP transporter, DctM subunit TERM 4388 3384028 - 3383993 - T 74 -10.5 -3.20382 | opp_overlap 3383995, overlap 3383994 CTGCATACTGAGTAA TTTTCAATGCCCCAC CACTCT GTGGGGCATTGAATT GGTCCATTACGGTAC TERM 4389 3384027 - 3383994 - T 86 -14 -2.52015 | opp_overlap 3383995, overlap 3383993 TGCATACTGAGTAAT TTTCAATGCCCCAC CACTCT GTGGGGCATTGAAT TGGTCCATTACGGTA TERM 4390 3383995 - 3384026 + T 100 -17.5 -3.22091 | opp_overlap 3383994 3383993 GCATACTGAGTAATT TTCAATGCCCCAC CACTCT GTGGGGCATTGAA TTGGTCCATTACGGT sufI 3385447 - 3384035 - | protein SufI plsC 3386259 - 3385522 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase parC 3388751 - 3386493 - | DNA topoisomerase IV, A subunit TERM 4391 3387922 - 3387943 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACGC TERM 4392 3388880 - 3388854 - R 79 -11.5 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGACGGCGA TAAAGACATCAATGT EcSMS35_3311 3390496 - 3388889 - | solute-binding family 5 protein TERM 4393 3390176 - 3390159 - G 72 -5.5 -4.46926 | overlap 3390160 CAGCCGAGGACAAAA TCCTCTG CCGT CAGAGGC TGACCGTCTGACCAC EcSMS35_3312 3391087 - 3390605 - | transcription activator effector binding domain/DNA gyrase inhibitor domain-containing protein EcSMS35_3313 3391532 - 3391140 - | hypothetical protein qseB 3391684 - 3392343 + | transcriptional regulatory protein QseB TERM 4394 3392592 - 3392571 - g 70 -3.7 -4.72863 | CCAAATAAATTAAAA CACGGTCAT GTTG ATGACGATG CGCTGACCTTTGCCA qseC 3392340 - 3393689 + | sensor histidine kinase QseC TERM 4395 3393916 - 3393861 - g 81 -12.6 -3.18199 | gap 1, opp_overlap 3393869 3393893, overlap 3393864 CAATGGTCAACTGAA CGACACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATGTCC GCATCGTTCGCGCCG TERM 4396 3393913 - 3393864 - g 81 -12.9 -2.78712 | gap 1, opp_overlap 3393869 3393893, overlap 3393861 TGGTCAACTGAACGA CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATG TCCGCATCGTTCGCG TERM 4397 3394053 - 3394039 - g 77 -2.9 -5.1287 | TGGACAGTGAAAAAA TACAT TGATG ATGTA TTCACCGAAGGTCAC mdaB 3393799 - 3394380 + | modulator of drug activity B ygiN 3394411 - 3394725 + | quinol monooxygenase YgiN TERM 4398 3394761 - 3394738 - T 74 -8.1 -4.11371 | TAACATTCCTGAAAA GAGGCCGGT GTTGCT ACCGGTCTC AGCCCAGATTAGCCA fitR 3395657 - 3394770 - | iron transport system regulatory protein FitR fitE 3396601 - 3395654 - | iron ABC transporter, periplasmic iron-binding protein FitE fitD 3397661 - 3396612 - | iron ABC transporter, permease protein FitD fitC 3398641 - 3397658 - | iron ABC transporter, permease protein FitC TERM 4399 3397797 - 3397786 - G 71 -2.2 -4.92757 | overlap 3397787 CCAGTAATAACAAAA GTGC GCCG ACAC AAGCTGAAAGAGGGA TERM 4400 3398101 - 3398128 + g 72 -8.4 -3.72374 | opp_overlap 3398100 3398098 3398097, overlap 3398098 GCCCCGCTAAATCAC CTGCTAGCCATG TCCG CATCGCCAGCAG TGTTTGTTCGTCAAG fitB 3399447 - 3398638 - | iron ABC transporter, ATP binding protein FitB EcSMS35_3323 3399646 - 3399527 - | hypothetical protein TERM 4401 3399783 - 3399800 + H 89 -8.4 -4.62069 | AAGAAACAATTTTCA CTCGCG ACAATC CGCGAG TTTTTGGGATAACAG TERM 4402 3401842 - 3401819 - g 72 -6.1 -4.30161 | GCATACAAAATGAAA TTGCAGTAT CCGGTC ACACTGCAA TTAAACGTCAAAAAC TERM 4403 3401915 - 3401902 - g 70 -6.7 -4.07133 | CATCGCCACAAATAA TCTGG GCAA CCAGA TTGGCGATCCTCGTG fitA 3399821 - 3401962 + | TonB-dependent outer membrane ferric coprogen receptor FitA TERM 4404 3401967 - 3402000 + T 100 -12.5 -4.95547 | opp_overlap 3401971, overlap 3401969 3401971 TGGAATTTTGATCAA AAAAGCCCGGTATAC ACTT GTATACCGGGCTATG TTTTATTCTTCTGGC TERM 4405 3401969 - 3401998 + T 100 -15.1 -4.08992 | opp_overlap 3401971, overlap 3401967 3401971 GAATTTTGATCAAAA AAGCCCGGTATAC ACTT GTATACCGGGCTA TGTTTTATTCTTCTG TERM 4406 3401971 - 3401996 + T 100 -17.7 -3.60952 | opp_overlap 3401971, overlap 3401969 3401967 ATTTTGATCAAAAAA GCCCGGTATAC ACTT GTATACCGGGC TATGTTTTATTCTTC TERM 4407 3401996 - 3401971 - T 100 -17.7 -5.14965 | opp_overlap 3401971 3401969 3401967 ATTTTGATCAAAAAA GCCCGGTATAC ACTT GTATACCGGGC TATGTTTTATTCTTC parE 3403918 - 3402026 - | DNA topoisomerase IV, B subunit yqiA 3404528 - 3403947 - | esterase YqiA TERM 4408 3404419 - 3404373 - G 73 -11.8 -2.61548 | opp_overlap 3404370 3404369, overlap 3404369 3404370 TTCCAGGACAATGGA TTCCAGCAGTT-CTGCCGCATC GGAAG GATACGGCGGCAACTGC-GGAA TGATCATCTCTACGT icc 3405355 - 3404528 - | protein icc EcSMS35_3328 3405802 - 3405380 - | hypothetical protein TERM 4409 3405469 - 3405479 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA TERM 4410 3405827 - 3405879 + r 72 -6.9 -4.20712 | overlap 3405835 CTCATTTTTTAACGC TTGATGATGCAGCTGCAGCCATTGC AAA GCGATGACCGACGCTGCGTTGTCGA TTTTCCCCTCTTCTA EcSMS35_3329 3406432 - 3405803 - | NUDIX family hydrolase TERM 4411 3407729 - 3407701 - g 77 -9.7 -3.61398 | TTCCTCCTTCAACAA CATTAATGCTTCT ATC AGTAGCATTAACG CCTACAAACAAGCCG tolC 3406637 - 3408118 + | outer membrane protein TolC TERM 4412 3408345 - 3408356 + G 71 -2.2 -4.9218 | overlap 3408344 CACCAGTCGCTCTCG CGGT TGCC ACTG TTTTTATGCTGGCTG TERM 4413 3408610 - 3408595 - g 70 -4.6 -4.46926 | TATGGCACCAGAAAA CCAGGC GCAG GCCCAG CAATCCAGCGGAAGT TERM 4414 3408796 - 3408766 - g 88 -8.3 -4.59773 | gap 1, overlap 3408767 3408769 CGCGACGGGTAAAAA CTATGGCGCAGCCC AGCC AGGCCGCACCAT-G ACCGTACCGAAGACG TERM 4415 3408794 - 3408769 - g 74 -11.1 -3.24422 | overlap 3408766 3408767 GACGGGTAAAAACTA TGGCGCAGCCC AGCC AGGCCGCACCA TGACCGTACCGAAGA TERM 4416 3408903 - 3408885 - g 70 -5.2 -4.41348 | CTGTTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC EcSMS35_3331 3408266 - 3408937 + | hypothetical protein TERM 4417 3409005 - 3409049 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 3409019, overlap 3409008 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGAC TERM 4418 3409008 - 3409046 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 3409019, overlap 3409005 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT EcSMS35_3332 3408943 - 3410103 + | glutathionylspermidine synthase family protein TERM 4419 3410114 - 3410138 + F 74 -10 -3.27475 | opp_overlap 3410116, overlap 3410112 3410116 AGTAATACAGCTTAA TATTGCCCCG ATAAG CGGGGCAATC TCTTATAATCCACCA TERM 4420 3410116 - 3410136 + F 86 -12.6 -3.20322 | opp_overlap 3410116, overlap 3410114 3410112 TAATACAGCTTAATA TTGCCCCG ATAAG CGGGGCAA TCTCTTATAATCCAC TERM 4421 3410136 - 3410116 - f 83 -12.6 -3.09648 | opp_overlap 3410114 3410112 3410116 TAATACAGCTTAATA TTGCCCCG ATAAG CGGGGCAA TCTCTTATAATCCAC TERM 4422 3411163 - 3411136 - g 82 -3.4 -5.24799 | gap 1, opp_overlap 3411154 TGAGAAAGATAAAAA TGCCGGTATCC TTGATGC GGGT-CCGGCA ACTGGCGCACTCCCT EcSMS35_3333 3410588 - 3412384 + | arylsulfate sulfotransferase TERM 4423 3412643 - 3412621 - g 70 -3.5 -4.62069 | CCGGTATCGGAAAAA GTGAAAG ATATCGTTG CTTTCAC GCCGTTCCATCTGGA EcSMS35_3334 3412402 - 3413070 + | DsbA family thioredoxin EcSMS35_3335 3413100 - 3413756 + | DsbB family disulfide bond formation protein TERM 4424 3413764 - 3413796 + T 100 -12 -4.66987 | opp_overlap 3413765 3413767, overlap 3413767 GAGGCTAACTCAGCA ACACCCGAAGCCAG TCATT CTGGCTTCGGGTTC TTTTATTAACCTATC TERM 4425 3413795 - 3413765 - T 100 -15.5 -3.22091 | opp_overlap 3413764 3413767, overlap 3413767 AGGCTAACTCAGCAA CACCCGAAGCCAG TCATT CTGGCTTCGGGTT CTTTTATTAACCTAT TERM 4426 3413793 - 3413767 - T 100 -18.1 -3.17319 | opp_overlap 3413767 3413764, overlap 3413765 GCTAACTCAGCAACA CCCGAAGCCAG TCATT CTGGCTTCGGG TTCTTTTATTAACCT TERM 4427 3413767 - 3413793 + T 100 -18.1 -4.43909 | opp_overlap 3413765 3413767, overlap 3413764 GCTAACTCAGCAACA CCCGAAGCCAG TCATT CTGGCTTCGGG TTCTTTTATTAACCT EcSMS35_3336 3414590 - 3413802 - | aromatic ring-opening dioxygenase TERM 4428 3414261 - 3414275 + g 81 -10 -3.86897 | overlap 3414252 CCACGAGCCGTGGTC GAAGCC CCA GGCTTC TTTATCCAGCGTCAC zupT 3414733 - 3415506 + | zinc transporter ZupT TERM 4429 3415554 - 3415509 - T 70 -7 -4.11484 | gap 1, opp_overlap 3415521 3415550, overlap 3415513 3415515 3415516 3415518 GGGAATTGGTTAAAA GCAAC-ATCAGAAGTTGTCCA GCGCA TGGACAACTTCTGCCAGCTTC ACTAAAGCCTTATTC TERM 4430 3415549 - 3415513 - T 83 -11 -3.67175 | opp_overlap 3415521, overlap 3415509 3415515 3415516 3415518 ATTGGTTAAAAGCAA CATCAGAAGTTGTCCA GCGCA TGGACAACTTCTGCCA GCTTCACTAAAGCCT TERM 4431 3415547 - 3415515 - T 100 -13.6 -3.41359 | opp_overlap 3415521, overlap 3415513 3415509 3415516 3415518 TGGTTAAAAGCAACA TCAGAAGTTGTCCA GCGCA TGGACAACTTCTGC CAGCTTCACTAAAGC TERM 4432 3415546 - 3415516 - T 100 -17.1 -2.64333 | opp_overlap 3415521, overlap 3415515 3415513 3415509 3415518 GGTTAAAAGCAACAT CAGAAGTTGTCCA GCGCA TGGACAACTTCTG CCAGCTTCACTAAAG TERM 4433 3415544 - 3415518 - T 87 -13.9 -2.85583 | opp_overlap 3415521, overlap 3415516 3415515 3415513 3415509 TTAAAAGCAACATCA GAAGTTGTCCA GCGCA TGGACAACTTC TGCCAGCTTCACTAA TERM 4434 3415521 - 3415541 + T 74 -9.8 -3.31322 | opp_overlap 3415518 3415516 3415515 3415513 3415509 AAAGCAACATCAGAA GTTGTCCA GCGCA TGGACAAC TTCTGCCAGCTTCAC EcSMS35_3338 3415758 - 3415564 - | hypothetical protein TERM 4435 3415960 - 3415939 - R 100 -5.9 -5.63236 | gap 1, opp_overlap 3415939 AGGGAAAAATAAAAA CCGAAGCCTG CTA CAA-CTTCGG TTTCTTGATTAAGGC ribB 3416649 - 3415996 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4436 3416364 - 3416392 + g 90 -10.3 -4.41206 | opp_overlap 3416369 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT TERM 4437 3416929 - 3416915 - H 71 -8.6 -3.4252 | GCGGATTCACTATAA CGCTAA TGA TTAGCG GCAGCAACGCATAGC EcSMS35_3340 3416963 - 3417322 + | hypothetical protein TERM 4438 3417351 - 3417336 - T 100 -11.8 -5.16206 | opp_overlap 3417336 AAAGCAACACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT TERM 4439 3417336 - 3417351 + T 79 -11.8 -2.67055 | opp_overlap 3417336 AAAGCAACACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT glgS 3417557 - 3417357 - | glycogen synthesis protein GlgS EcSMS35_3342 3417826 - 3418455 + | putative inner membrane protein TERM 4440 3418813 - 3418800 - g 70 -6.7 -4.07568 | TTTGTGCGGGTAAAA CCTTC AGTA GAAGG GATCGCCACCGCTGC TERM 4441 3419784 - 3419772 - g 71 -9.1 -3.50853 | CTGGCGGAAGCAGAA GCGCA ACG TGCGC TGAACGACGCTATCA EcSMS35_3343 3418482 - 3420143 + | SPFH domain-containing protein/band 7 family protein TERM 4442 3420161 - 3420183 + T 100 -8.4 -5.4251 | opp_overlap 3420161 3420159 TTTCAGCTATGAACA TCCCTGGC ACAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4443 3420362 - 3420343 - T 91 -11.4 -3.71649 | overlap 3420327 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTACAGAAGGAAAG TERM 4444 3420473 - 3420452 - T 71 -10.1 -2.79248 | opp_overlap 3420452 3420452, overlap 3420454 ATTAACAGCCAATCA GAGGGGGGA GAAA TCCTCCCTC ACCCTTGTTCCTTTA TERM 4445 3420537 - 3420559 + T 100 -8.4 -5.4251 | opp_overlap 3420535 3420533 3420537 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4446 3420719 - 3420738 + T 70 -10 -2.57132 | gap 1, opp_overlap 3420702 3420712 3420719, overlap 3420718 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC CTTATAGAAGGAAAG TERM 4447 3420738 - 3420719 - T 91 -11.4 -3.71649 | opp_overlap 3420718 3420719, overlap 3420702 3420712 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG hldE 3422370 - 3420937 - | bifunctional protein HldE glnE 3425258 - 3422418 - | glutamate-ammonia ligase adenylyltransferase TERM 4448 3424433 - 3424416 - G 70 -4 -4.6951 | ACGACGGAAAACAAA CGGGCG CAGCAT CGCACG CAACTCGTTAGCATA TERM 4449 3424682 - 3424668 - G 74 -2.8 -5.0133 | overlap 3424670 CATGCGGGTAAAAAA CTGG GCGTTAT CCAG TTCCCGGCGTCCGCC TERM 4450 3424745 - 3424730 - G 77 -6.2 -4.65895 | CCGGCCAGGCAAAAA TCAGAT CGAT ATCTGA GGAGAAATTCAGTTC EcSMS35_3346 3426582 - 3425281 - | adenylate cyclase TERM 4451 3425637 - 3425611 - G 72 -5 -4.65895 | opp_overlap 3425611, overlap 3425612 TTTGGCATCTAAAAA CGGCTGCCAGGC TTT GCTTACCAGCCA TTCGGTCAACGCCAG EcSMS35_3347 3426784 - 3426599 - | hypothetical protein TERM 4452 3427256 - 3427246 - g 83 -5.4 -5.093 | GTTAAAAGAAGAAAA TCAG AAA CTGA AAAACGAGCTGATTG EcSMS35_3348 3426824 - 3427444 + | hypothetical protein TERM 4453 3427614 - 3427641 + G 95 -11.2 -4.47397 | overlap 3427615 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTGTTTCT TERM 4454 3427615 - 3427640 + G 95 -14.7 -3.26811 | overlap 3427614 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTGTTTC TERM 4455 3427713 - 3427725 + G 82 -9.1 -4.22652 | opp_overlap 3427700 3427707 AACGGAAATCCGGTT CCGGT TAC ACCGG TTTTACCTGCTATGC TERM 4456 3427901 - 3427926 + G 78 -8.3 -4.2679 | gap 1, opp_overlap 3427900, overlap 3427901 3427908 3427916 GCTTTTGGCGAAGAT C-CGTTACGCGT GTT GCGCGTAGCGCG TTTTGCTGCGCGTTA TERM 4457 3428099 - 3428120 + G 75 -5.1 -4.63218 | gap 1, overlap 3428109 TTCTTCCAGGTACTG CGCG-ATTGC GGC GCACTGCGCG TTTTATTCCCGGAAA cca 3427508 - 3428746 + | multifunctional CCA protein TERM 4458 3428780 - 3428818 + T 78 -11.1 -3.18264 | gap 1, opp_overlap 3428775 3428792 3428801, overlap 3428782 ATTGCAAACACCGGC CAG-GTCGGATAAGACGC ACAA GCGTCATATCCGACACTA TTCCTCAATCAAAAG TERM 4459 3428782 - 3428816 + T 93 -13.7 -3.1552 | gap 1, opp_overlap 3428775 3428792 3428801, overlap 3428780 TGCAAACACCGGCCA G-GTCGGATAAGACGC ACAA GCGTCATATCCGACAC TATTCCTCAATCAAA bacA 3429639 - 3428827 - | undecaprenyl-diphosphatase BacA folB 3430107 - 3429739 - | dihydroneopterin aldolase EcSMS35_3352 3430212 - 3430829 + | hypothetical protein ttdR 3431774 - 3430842 - | HTH-type transcriptional activator TtdR TERM 4460 3431930 - 3431916 - H 73 -2.8 -5.06052 | opp_overlap 3431916 GCAAAAAATATAAAA CCAC ATTTTTA GTGG TAGTTTGTGGCGGTG ddtA 3431981 - 3432892 + | L(+)-tartrate dehydratase, alpha subunit TERM 4461 3433443 - 3433428 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 3432889 - 3433494 + | L(+)-tartrate dehydratase, beta subunit TERM 4462 3433502 - 3433521 + F 88 -9.3 -4.57073 | opp_overlap 3433495 3433496 TCAAATAACCCTCCC GGAGAGG CTCGCC CCTCTCC TTTTTCGCAGGCATA TERM 4463 3433711 - 3433740 + G 85 -11.5 -3.60525 | TGCCGGGTGCCGTGG TGGCGATGGTGGG TATC TCCATTATCGCCA TTCTCTCTCCCTGGC TERM 4464 3433947 - 3433937 - g 72 -5.4 -4.57073 | opp_overlap 3433944 GATTCTGGTGAAAAA GATG GGG CATC GCACGCTGTTTCTCG EcSMS35_3356 3433542 - 3435005 + | anion transporter gcp 3436061 - 3435048 - | O-sialoglycoprotein endopeptidase TERM 4465 3435444 - 3435432 - G 72 -5.5 -4.50976 | overlap 3435439 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 4466 3435980 - 3435995 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 4467 3436266 - 3436249 - H 76 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3436299 - 3436514 + | ribosomal protein S21 TERM 4468 3436558 - 3436591 + F 82 -7.6 -4.62475 | overlap 3436562 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 4469 3436562 - 3436588 + F 90 -10.9 -4.40882 | gap 1, overlap 3436558 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 4470 3437075 - 3437060 - g 70 -3.9 -4.60487 | CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCCCGCT TERM 4471 3437957 - 3437924 - g 70 -5.9 -4.20696 | opp_overlap 3437924 3437935, overlap 3437916 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 3436625 - 3438370 + | DNA primase rpoD 3438565 - 3440406 + | RNA polymerase sigma factor RpoD TERM 4472 3440425 - 3440442 + F 100 -8.4 -5.75342 | opp_overlap 3440425 TAAAGATGTGCATAA GCCCTC CATCGT GAGGGC TTTTTTTTAAGGAAA EcSMS35_3361 3440465 - 3441028 + | hypothetical protein mug 3441591 - 3441085 - | G/U mismatch-specific DNA glycosylase TERM 4473 3441824 - 3441803 - R 100 -14.5 -3.91597 | opp_overlap 3441803 ACCAGACATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTATATAT TERM 4474 3441803 - 3441824 + r 100 -14.5 -5.4433 | opp_overlap 3441803 ACCAGACATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTATATAT EcSMS35_3364 3442609 - 3441845 - | siderophore-interacting protein TERM 4475 3443028 - 3443062 + G 70 -4.9 -4.49556 | gap 1, overlap 3443029 GGTCAATGCTGCGGT GGTCGCC-ACGGTCGC GGCG GCGGTCGTCGGCAACG TTTCTTTGGTCACGG TERM 4476 3443483 - 3443468 - g 100 -3.3 -5.72622 | opp_overlap 3443475 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT EcSMS35_3365 3442896 - 3443519 + | PadR family transcriptional regulator TERM 4477 3443563 - 3443592 + T 87 -11.3 -3.57144 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA aer 3445068 - 3443548 - | aerotaxis receptor TERM 4478 3444797 - 3444814 + g 70 -4.1 -4.59773 | opp_overlap 3444791, overlap 3444782 CGCACCCAATAATGG TCGCC ATTTTTGC GGCGA TTTTTCACGATGCCG ygjG 3445576 - 3446865 + | putrescine aminotransferase TERM 4479 3446871 - 3446903 + T 100 -12.8 -4.85599 | opp_overlap 3446873, overlap 3446873 AGAAGCGTAATATCA AATCGGATGGCGAT TCGAC GTCGCCATCCGATC TTTTTATACGATACG TERM 4480 3446901 - 3446873 - T 100 -14.7 -3.9344 | opp_overlap 3446871 3446873 AAGCGTAATATCAAA TCGGATGGCGA TTCGACG TCGCCATCCGA TCTTTTTATACGATA TERM 4481 3446873 - 3446901 + T 100 -15.4 -4.05067 | opp_overlap 3446873, overlap 3446871 AAGCGTAATATCAAA TCGGATGGCGAT TCGAC GTCGCCATCCGA TCTTTTTATACGATA EcSMS35_3368 3447239 - 3446907 - | putative methionyl-tRNA synthetase, beta subunit TERM 4482 3447077 - 3447115 + g 79 -4.4 -5.00884 | CCATCAGCTCTTCTT CGCTGTAGTACGGCACCA GGC TGGTCACGGTTTGCAGCG TTTTTTCACCCACAT TERM 4483 3448385 - 3448365 - g 72 -6.7 -4.25104 | opp_overlap 3448378, overlap 3448366 CCTGTTGTATGAAAA GGCTCGCGA TGG TCGCGCGCT GCCGCTGTTAGTCTT TERM 4484 3448384 - 3448366 - g 70 -10.2 -3.14848 | opp_overlap 3448378, overlap 3448365 CTGTTGTATGAAAAG GCTCGCGA TGG TCGCGCGC TGCCGCTGTTAGTCT ebgR 3447457 - 3448440 + | HTH-type transcriptional regulator EbgR TERM 4485 3448447 - 3448489 + F 85 -7.8 -4.73614 | gap 1, opp_overlap 3448454, overlap 3448448 3448449 ACCCGCTAAATCCCC TTACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC TERM 4486 3448448 - 3448488 + F 73 -9.1 -3.43084 | gap 1, opp_overlap 3448454, overlap 3448447 3448449 CCCGCTAAATCCCCT TACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCC GTTTATTTTCGTGAT TERM 4487 3448449 - 3448487 + F 81 -12.6 -2.64766 | gap 1, opp_overlap 3448454, overlap 3448448 3448447 CCGCTAAATCCCCTT ACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGC CGTTTATTTTCGTGA TERM 4488 3448481 - 3448454 - f 93 -15.7 -2.8806 | opp_overlap 3448449 3448448 3448447 AAATCCCCTTACACA CTGTCCGGCAA TCGTTT TTGCCGGACAG TGCTGCCGTTTATTT TERM 4489 3448764 - 3448776 + G 91 -7.7 -5.03314 | GTCCTTAAGCGGTCA GTGGA ATT TCCAC TTTTTTGACCATCCG TERM 4490 3449447 - 3449434 - g 75 -4.5 -4.74103 | opp_overlap 3449434 TTGGCAATTGAAAAA CTGAC CAGC GCCAG CTTTGCTTTTACTGT TERM 4491 3450587 - 3450565 - g 72 -7.6 -3.8647 | ACGCAGCAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTGCA ebgA 3448624 - 3451716 + | beta-galactosidase, subunit alpha TERM 4492 3452131 - 3452143 + G 72 -7.7 -3.96216 | opp_overlap 3452128 3452127 3452131 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 3451713 - 3452162 + | evolved beta-galactosidase, beta subunit TERM 4493 3452199 - 3452163 - f 76 -8 -4.27512 | overlap 3452166 3452169 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCACCGCTA CCCTACTCATTTTCG TERM 4494 3452196 - 3452166 - f 84 -9.7 -4.24183 | overlap 3452163 3452169 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCACCG CTACCCTACTCATTT TERM 4495 3452193 - 3452169 - f 81 -12.2 -3.09866 | overlap 3452166 3452163 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCA CCGCTACCCTACTCA TERM 4496 3452471 - 3452457 - g 72 -5.6 -4.56775 | ACGCGTGGGTAAAAA GTTCGC TGG GCGGAC GTTGGGCATTTATTA TERM 4497 3453226 - 3453214 - g 70 -4.7 -4.45664 | CGAACTGAACGAAAA CGGCG TTC CGGCG CGCGCAGCGTGGATC EcSMS35_3372 3452225 - 3453658 + | amino acid permease family protein TERM 4498 3453683 - 3453719 + F 93 -11.8 -4.04922 | gap 1, opp_overlap 3453678, overlap 3453677 3453685 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAATAG TTTCTGCCTTTATAT TERM 4499 3453685 - 3453716 + F 89 -14.6 -3.05274 | opp_overlap 3453678, overlap 3453683 3453677 AAAAATGAGCAGGCA TTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAA TAGTTTCTGCCTTTA EcSMS35_3373 3453792 - 3454862 + | hypothetical protein TERM 4500 3455470 - 3455447 - g 78 -8.2 -4.15833 | gap 1 ACTATCAGCGCAAAA TCAGCGCCACC CGT GATGGC-CTGA AAGTCACCTTTGGCA EcSMS35_3374 3454879 - 3457230 + | hypothetical protein fadH 3457401 - 3459419 + | 2,4-dienoyl-CoA reductase TERM 4501 3459522 - 3459491 - T 100 -21.8 -2.52795 | opp_overlap 3459501 3459517, overlap 3459501 AATGTGCTGAACGTA TGCCAGATAAGGCG TTTA CGCCTTATCTGGCA GGTAGCTGCCAATCT EcSMS35_3376 3460673 - 3459537 - | methyltransferase family protein TERM 4502 3460186 - 3460202 + g 74 -6.5 -4.58283 | CATGCCAGTGTGGTG GTGGTCG GAC CGAGCAC TTTTTCGAACAGTTC EcSMS35_3377 3460758 - 3461261 + | hypothetical protein TERM 4503 3461487 - 3461510 + G 76 -7.4 -4.24342 | gap 1, overlap 3461487 3461490 CTGGAGCGATGTCAA CGC-CGTTCCG GCG CGGAACGTGGG TTTATTGCTGGGAGC TERM 4504 3461490 - 3461506 + G 77 -12.3 -2.77283 | overlap 3461487 3461487 GAGCGATGTCAACGC CGTTCCG GCG CGGAACG TGGGTTTATTGCTGG EcSMS35_3378 3461338 - 3462021 + | putative SanA protein TERM 4505 3462871 - 3462853 - g 70 -3.8 -4.65895 | opp_overlap 3462853 CTGGTGATTGAAAAA CTGTCTGA ATG CCAGAAAG TTTGCTTTGTTCCGC EcSMS35_3379 3462100 - 3463086 + | oxidoreductase, NAD binding TERM 4506 3463264 - 3463245 - f 83 -10.8 -3.66178 | opp_overlap 3463245 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4507 3463245 - 3463264 + F 100 -10.8 -5.56673 | opp_overlap 3463245 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4508 3463303 - 3463282 - f 70 -10.1 -2.52464 | opp_overlap 3463284 TTTTGTTGTAAGTGA GACCTTGCC GGAA GGCGAGGTC TATGCATAAAAAGCA TERM 4509 3463320 - 3463345 + F 100 -13.3 -5.76633 | opp_overlap 3463320 3463319 3463317 ATGCATAAAAAGCAG CGGCTGACGTC TTCC GACGTTGGCCG TTTTTTTATGTGTAA alx 3463370 - 3464335 + | protein Alx sstT 3464659 - 3465903 + | sodium:serine/threonine symporter TERM 4510 3465911 - 3465935 + T 100 -14.3 -4.44974 | GTAACTAATACTTAG CCCCTTTCGTC TAC GGCGGAAGGGG TTTTCTCCACTTTAA EcSMS35_3382 3466458 - 3465907 - | putative inner membrane protein TERM 4511 3466514 - 3466490 - R 100 -12.9 -4.21922 | opp_overlap 3466490 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC TERM 4512 3466490 - 3466514 + r 100 -10 -5.4505 | opp_overlap 3466490 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC uxaA 3468028 - 3466541 - | altronate dehydratase TERM 4513 3466717 - 3466743 + g 77 -8.7 -4.11216 | TCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA uxaC 3469455 - 3468043 - | glucuronate isomerase TERM 4514 3468262 - 3468241 - G 72 -7.9 -3.95787 | opp_overlap 3468242 3468254, overlap 3468254 CAGCATACCGACAAA GCGGCTCAG CAGA CCGAGCTGC GCCAGTTGGGTCATC TERM 4515 3470796 - 3470816 + G 72 -8.9 -3.83502 | overlap 3470782 3470800 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTGAACCTG TERM 4516 3470800 - 3470812 + G 73 -9.1 -3.59402 | overlap 3470782 3470796 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTGAA exuT 3469938 - 3471236 + | hexuronate transporter TERM 4517 3471250 - 3471292 + T 100 -11.5 -5.34555 | gap 1, opp_overlap 3471259 3471263, overlap 3471256 3471259 AAGAATTAACGTAAG TTGTAATGACGAAGCCGCCT CTTC AGGCGGCTTCGTTGTT-TAG TTTTTTCTGGTCTGC TERM 4518 3471256 - 3471287 + T 100 -17.4 -4.47686 | opp_overlap 3471259 3471263, overlap 3471250 3471259 TAACGTAAGTTGTAA TGACGAAGCCGCCT CTTC AGGCGGCTTCGTTG TTTAGTTTTTTCTGG TERM 4519 3471259 - 3471284 + T 100 -19.1 -4.30001 | opp_overlap 3471259 3471263, overlap 3471256 3471250 CGTAAGTTGTAATGA CGAAGCCGCCT CTTC AGGCGGCTTCG TTGTTTAGTTTTTTC TERM 4520 3471284 - 3471259 - T 100 -19.1 -2.73542 | opp_overlap 3471256 3471250 3471259, overlap 3471263 CGTAAGTTGTAATGA CGAAGCCGCCT CTTC AGGCGGCTTCG TTGTTTAGTTTTTTC TERM 4521 3471280 - 3471263 - T 86 -12.7 -3.27476 | opp_overlap 3471259 3471256 3471250, overlap 3471259 AGTTGTAATGACGAA GCCGCCT CTTC AGGCGGC TTCGTTGTTTAGTTT EcSMS35_3386 3472406 - 3471312 - | pilus biogenesis initiator TERM 4522 3472132 - 3472145 + g 76 -3.8 -4.9792 | overlap 3472119 AGTTTGACGGGCCAA CGCA TTCCAC TGCG TTTTTCTGTCAAATA TERM 4523 3472217 - 3472180 - G 74 -8.5 -3.86897 | TTCACTGTTGATAAA TTTCCTGATGCGGTACA GGTC TGCTGCACATCAGGAAA ATCGCATTTATAACT EcSMS35_3387 3475087 - 3472403 - | hypothetical protein TERM 4524 3473502 - 3473490 - G 74 -6.2 -4.4767 | opp_overlap 3473490 TCACGCATCACAAAA GCGC GAGAA GCGC TAAGTTGTACGGTCT TERM 4525 3475151 - 3475129 - R 79 -7.7 -4.35581 | opp_overlap 3475132, overlap 3475132 CTAAAATAGTTAAAA GAAGGGAGG ACTTG CCTCCCTTT ATTGCATGTTAATTC TERM 4526 3475148 - 3475132 - R 84 -9.4 -4.2651 | opp_overlap 3475132, overlap 3475129 AAATAGTTAAAAGAA GGGAGG ACTTG CCTCCC TTTATTGCATGTTAA TERM 4527 3475132 - 3475148 + r 84 -9.4 -4.254 | opp_overlap 3475129 3475132 AAATAGTTAAAAGAA GGGAGG ACTTG CCTCCC TTTATTGCATGTTAA EcSMS35_3388 3475678 - 3475178 - | CS1 type fimbrial major subunit EcSMS35_3389 3476424 - 3475708 - | putative CFA/I fimbrial subunit A EcSMS35_3390 3476632 - 3476504 - | hypothetical protein TERM 4528 3477275 - 3477248 - g 74 -2.6 -5.0538 | overlap 3477250 CCGTACTGGAAAAAA CTGCACGAACAC ATTG ATGCCCGTACCG TCGATAACTGGTGTG exuR 3476714 - 3477490 + | exu regulon transcriptional regulator TERM 4529 3477504 - 3477523 + T 86 -10.7 -4.0942 | opp_overlap 3477494 GAAATTCCTGTCCGA CAGGCGC TACAGT GCGCCTG TTTGTCTCGTCGGTA EcSMS35_3392 3477792 - 3477676 - | hypothetical protein TERM 4530 3477781 - 3477765 - G 72 -5.1 -4.48903 | opp_overlap 3477777, overlap 3477767 CAAAACATACCAAAA CAGCAAT AAC ATTGCGG TAGTGCATCATTTAA EcSMS35_3393 3477835 - 3478497 + | putative inner membrane protein EcSMS35_3394 3478516 - 3478884 + | hypothetical protein EcSMS35_3395 3479031 - 3479399 + | hypothetical protein EcSMS35_3396 3479437 - 3479742 + | hypothetical protein EcSMS35_3397 3479745 - 3480149 + | hypothetical protein TERM 4531 3480189 - 3480211 + G 78 -9.2 -3.88291 | opp_overlap 3480199 GCAACTGCTTAGCCA GATCCAGC AACAACG GCTGGATC TTTCTGCCAGTCGTC EcSMS35_3398 3480139 - 3480438 + | hypothetical protein TERM 4532 3480448 - 3480466 + F 90 -12.4 -3.37071 | GGTTAACTTCCCTCT GGCCGGAG CCA TTCCGGCC TTATCCCTCAAATTT TERM 4533 3480603 - 3480592 - g 79 -4.4 -4.89054 | overlap 3480595 TGCACAAAAAAACAA TCAG CAGC CTGA GCGGCGCAGTGGAGA TERM 4534 3480862 - 3480872 + G 82 -3.2 -5.27335 | overlap 3480860 CTGCGGGCTTTACGC TGCT GAC GGCA TTTTTATTTCACAGC EcSMS35_3399 3480534 - 3481016 + | putative inner membrane protein YqjF TERM 4535 3481044 - 3481062 + F 80 -10.3 -3.72051 | opp_overlap 3481044 CTTAACAATAAAAAA CGAGGAG GAACA CTCCTCG TTTCAGATTGTTGAC TERM 4536 3481062 - 3481044 - f 100 -10.3 -5.64873 | opp_overlap 3481044 CTTAACAATAAAAAA CGAGGAG GAACA CTCCTCG TTTCAGATTGTTGAC TERM 4537 3481087 - 3481116 + F 80 -10.7 -3.30124 | opp_overlap 3481082 GTTGACAAAGTGCGC GTTGTTCATGCCG GATG CGGCGTGAACGCC TTATCCGGCCTACAA TERM 4538 3481221 - 3481239 + F 91 -10.3 -4.87626 | opp_overlap 3481221 GCCATCAGTCTCAAA CGAGGAG AAACG CTCCTCG TTTTTGCTATTGGAG TERM 4539 3481239 - 3481221 - f 78 -10.3 -3.58343 | opp_overlap 3481221 GCCATCAGTCTCAAA CGAGGAG AAACG CTCCTCG TTTTTGCTATTGGAG EcSMS35_3400 3481264 - 3482250 + | hypothetical protein TERM 4540 3482273 - 3482256 - f 87 -5.5 -5.40072 | opp_overlap 3482256 CTTCGGTTAAAAAAA GGCACCT TACG ATGTGCC TCTGATAATTAGCTA EcSMS35_3401 3482533 - 3482898 + | putative inner membrane protein YhaH TERM 4541 3482912 - 3482934 + F 93 -10.6 -4.50583 | AAAACAAATCTCCTC GCCGGATG TCTGACT CATCCGGC TTTTATCATCATGTT EcSMS35_3402 3483140 - 3483496 + | putative inner membrane protein TERM 4542 3483507 - 3483524 + T 100 -12.7 -5.07486 | opp_overlap 3483506 3483505 ATTAATCTTAGAATT GGGGCGA TATT TCGCCCC TTTTTATTAAAAATA EcSMS35_3403 3484443 - 3483547 - | LysR family transcriptional regulator EcSMS35_3404 3484548 - 3485249 + | pirin family protein EcSMS35_3405 3485269 - 3485436 + | hypothetical protein TERM 4543 3485475 - 3485443 - T 79 -9.8 -3.81755 | gap 1, opp_overlap 3485454, overlap 3485444 ACCGCGTAAAGACAA GTGCCGGATGTGGCG TAAA CGCCTTATCCGGC-C TACAAAACACAACAA TERM 4544 3485475 - 3485444 - T 72 -10 -2.88571 | opp_overlap 3485454, overlap 3485443 CCGCGTAAAGACAAG TGCCGGATGTGGCG TAAA CGCCTTATCCGGCC TACAAAACACAACAA EcSMS35_3406 3486879 - 3485569 - | hypothetical protein TERM 4545 3486285 - 3486274 - G 75 -7.2 -4.35604 | opp_overlap 3486279 GGAATCGAGAATAAA GCGG ATCG CCGC AAACGGGACTTCATT TERM 4546 3486902 - 3486888 - R 70 -2.8 -4.90217 | overlap 3486896 CAAACATATTAAAAA CCTTAA AAT TTCAGG GAAATCAAGAAAATG EcSMS35_3407 3488238 - 3486907 - | serine transporter family protein TERM 4547 3488488 - 3488471 - R 100 -11.3 -6.00086 | AGATCACAAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG TERM 4548 3488517 - 3488500 - R 79 -9.9 -3.84961 | overlap 3488512 CACCCAAGGATGAAA GCTGACA GCAA TGTCAGC CGCAGACCACTTTAA tdcG 3489883 - 3488513 - | L-serine ammonia-lyase TdcG TERM 4549 3489942 - 3489908 - R 79 -11.5 -3.05384 | gap 1, opp_overlap 3489921 3489922, overlap 3489922 TTGCCGTTCAGTGAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCTTTACGCACT EcSMS35_3409 3490338 - 3489949 - | putative endoribonuclease L-PSP pflB1 3492646 - 3490352 - | formate acetyltransferase TERM 4550 3490842 - 3490864 + g 70 -5.5 -4.33854 | GACTGGGTAGGGACG GCGTTGCGA TAGGT TGGCAGCGC TTTAATTTTCTTCAT TERM 4551 3492242 - 3492273 + g 81 -8.8 -4.35461 | gap 1 ATATTCAAATTCACT GTCCATTTCACGACC ATA GG-CGTGGAATGAAC TTTTAATCATATTAA tdcD 3493888 - 3492680 - | propionate kinase TERM 4552 3493714 - 3493745 + g 73 -9.4 -3.57263 | gap 1, overlap 3493714 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT TERM 4553 3493714 - 3493744 + g 70 -11 -2.74144 | overlap 3493714 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA tdcC 3495245 - 3493914 - | threonine/serine transporter tdcB 3496256 - 3495267 - | threonine dehydratase, catabolic TERM 4554 3495319 - 3495340 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA tdcA 3497293 - 3496355 - | transcriptional regulator TdcA tdcR 3497482 - 3497826 + | threonine dehydratase operon activator protein EcSMS35_3416 3498045 - 3497908 - | hypothetical protein EcSMS35_3417 3498082 - 3498621 + | hypothetical protein TERM 4555 3499309 - 3499286 - g 85 -6.8 -4.75372 | ATTATTTACTAAAAA TAACGCCTGT TATA ACAAGCATTA ACGATATGTATTCTG EcSMS35_3418 3498643 - 3499830 + | hypothetical protein TERM 4556 3499930 - 3499903 - T 88 -9.2 -4.58663 | opp_overlap 3499911, overlap 3499892 3499910 ACTATGCTCCAAAAA GCAAAAACCCGC CGAA GCGGTTTTTTAC GTAAAACAGGTGAAA TERM 4557 3499923 - 3499910 - T 79 -3.7 -5.18355 | opp_overlap 3499911, overlap 3499903 TCCAAAAAGCAAAAA CCCGC CGAA GCGGT TTTTTACGTAAAACA TERM 4558 3499911 - 3499922 + T 86 -7.2 -5.08824 | opp_overlap 3499910 3499903 CCAAAAAGCAAAAAC CCGC CGAA GCGG TTTTTTACGTAAAAC TERM 4559 3500044 - 3500017 - T 100 -15 -4.56597 | opp_overlap 3500024, overlap 3500024 CCGCTCCTCCAAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAAACAGGTGAAA TERM 4560 3500037 - 3500024 - T 100 -9.5 -5.18355 | opp_overlap 3500024, overlap 3500017 TCCAAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAAACA TERM 4561 3500024 - 3500037 + T 91 -9.5 -4.65895 | opp_overlap 3500017 3500024 TCCAAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAAACA garK 3501606 - 3500461 - | glycerate kinase TERM 4562 3501629 - 3501640 + r 77 -7.2 -4.34263 | opp_overlap 3501629 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 3502587 - 3501703 - | 2-hydroxy-3-oxopropionate reductase TERM 4563 3502263 - 3502277 + g 77 -10 -3.57561 | overlap 3502257 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA TERM 4564 3502520 - 3502534 + g 73 -4.2 -4.81685 | opp_overlap 3502520 ACCACCAGCGAGTAA CCTGCT TTC AGAAGG TTTTTACTCATTGGT garL 3503393 - 3502623 - | 2-dehydro-3-deoxyglucarate aldolase garP 3504743 - 3503409 - | galactarate permease GarP TERM 4565 3504043 - 3504057 + g 76 -4.2 -4.9218 | TTGGGACCGCTTGCT GCCG CACTGCC CGGC TTTTTGTGGTCCATA EcSMS35_3423 3504764 - 3504889 + | hypothetical protein EcSMS35_3424 3504952 - 3505071 + | hypothetical protein garD 3505118 - 3506689 + | galactarate dehydratase TERM 4566 3506716 - 3506733 + F 91 -7 -5.38549 | opp_overlap 3506716 ACGTCCCTCGCAAAA CATGGC CTTAGT GCCATG TTTTTATTGTTTAAA TERM 4567 3506733 - 3506716 - f 70 -7 -4.07687 | opp_overlap 3506716 ACGTCCCTCGCAAAA CATGGC CTTAGT GCCATG TTTTTATTGTTTAAA sohA 3507033 - 3507173 + | HtrA suppressor protein SohA TERM 4568 3507590 - 3507579 - g 81 -5.8 -4.7416 | GCAAAATGTTAAAAA GAGG ACAT CCTC CTGCCGACTGGGAAA EcSMS35_3427 3507173 - 3507637 + | hypothetical protein EcSMS35_3428 3508501 - 3507692 - | DeoR family transcriptional regulator EcSMS35_3429 3508750 - 3510030 + | D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit agaV 3510053 - 3510526 + | PTS system, N-acetylgalactosamine-specific, IIB component agaW 3510537 - 3511316 + | PTS system, N-acetylgalactosamine-specific, IIC component agaE 3511306 - 3512184 + | PTS system N-acetylgalactosamine-specific, IID component agaF 3512202 - 3512636 + | PTS system, mannose/sorbose-specific, IIA component TERM 4569 3513048 - 3513035 - g 70 -5.2 -4.30987 | opp_overlap 3513040, overlap 3513037 ACGCCGCAGAATAAA GGCG CGCATC CGCC GGAGCTGTTTCGCGA nagA1 3512612 - 3513766 + | N-acetylglucosamine-6-phosphate deacetylase TERM 4570 3513785 - 3513808 + F 74 -3.2 -5.1502 | gap 1 TTTGCTCCTTTATTG GGCCTTCAC TTCCCCC GT-AAGGCC TTTCTTTTTCTTTCT EcSMS35_3435 3514117 - 3515271 + | AgaS family sugar isomerase agaY 3515284 - 3516144 + | tagatose-1,6-bisphosphate aldolase agaY TERM 4571 3516172 - 3516201 + F 70 -9.3 -3.14132 | opp_overlap 3516176, overlap 3516176 TATGATTTATCCCAA TGTACTTCCCGAT TAAT ATCGGGGAGTGCC TTAATGGAAAAGGAG TERM 4572 3516176 - 3516197 + F 74 -10.9 -2.56596 | opp_overlap 3516176, overlap 3516172 ATTTATCCCAATGTA CTTCCCGAT TAAT ATCGGGGAG TGCCTTAATGGAAAA agaB 3516311 - 3516787 + | PTS system, D galactosamine-specific, IIB component TERM 4573 3516896 - 3516906 + G 81 -6.8 -4.63592 | TGGGGATTGATTTTT GGCT GGA AGCC TTATTTTTATTCCGC agaC 3516826 - 3517629 + | PTS system, N-acetylgalactosamine-specific EIIC component agaD 3517619 - 3518410 + | PTS system, D-galactosamine-specific, IID component TERM 4574 3518418 - 3518442 + G 100 -13.6 -3.90856 | opp_overlap 3518417 3518413 3518412 3518420 TTTTGTAAATGGAAC GAGGCACTGC GTCTG GCGGTGCCTC TTTACTTAAGGAATT TERM 4575 3518637 - 3518619 - g 82 -3 -5.24531 | opp_overlap 3518623 ATCTGGTAGAAAAAA TCCACCAG CAG CAGGTTGA TGTCAGCCAGCTCAC TERM 4576 3518987 - 3518970 - g 72 -4.7 -4.65168 | overlap 3518971 ATGAGATGTTAAAAA CCGCGGG CCGT CCCGTGA CTCGTGGGATCACCT EcSMS35_3440 3518411 - 3519178 + | putative galactosamine-6-phosphate isomerase TERM 4577 3519192 - 3519222 + T 77 -11.2 -2.82015 | opp_overlap 3519192, overlap 3519181 3519193 AACTCGCCTGGTAAA GGCGTTGTAGCG CTATTCC TGCTGCAACGCC TGTAATCACTCTCCC TERM 4578 3519222 - 3519192 - T 71 -8.3 -3.53343 | opp_overlap 3519181 3519192 3519193 AACTCGCCTGGTAAA GGCGTTGTAGC GCTATTCCT GCTGCAACGCC TGTAATCACTCTCCC EcSMS35_3441 3520091 - 3519228 - | tetrapyrrole methylase family protein TERM 4579 3520151 - 3520140 - H 89 -3 -5.75945 | ATTGCGTAAAAAAAA TATC ACTG GATA CATTATGGTACCCTC TERM 4580 3520572 - 3520554 - gH 78 -5.3 -4.79352 | opp_overlap 3520561 3520564, overlap 3520534 3520532 3520530 3520529 CGATTTAGAACAAAA CCAGCAA GCGCG TTACTGG CAGGCAAAAATCGAT TERM 4581 3521110 - 3521087 - gH 72 -8.8 -3.5764 | gap 1, opp_overlap 3521095 AACCTCAGCCGCAAA CCGTGGATGGC GTT GCCAGCC-CGG CACAAGCCTCGGTTA EcSMS35_3442 3520156 - 3522192 + | putative lipoprotein EcSMS35_3443 3522150 - 3522545 + | hypothetical protein diaA 3522565 - 3523155 + | DnaA initiator-associating protein DiaA EcSMS35_3445 3523165 - 3523740 + | phospholipid-binding domain-containing protein TERM 4582 3523798 - 3523740 - T 77 -10.5 -3.45324 | gap 2, opp_overlap 3523758 3523763 3523774, overlap 3523793 TACGTTTATTAAATA GCAGCCCTTGTAATGCCTGATGCGACGCT TGC AGCGTCTTATCAGGC-CTACAACGA-TGC AAACCGTAGGTCGGA TERM 4583 3523763 - 3523777 + T 76 -10 -3.30124 | opp_overlap 3523740, overlap 3523758 3523774 TGTAATGCCTGATGC GACGCT TGC AGCGTC TTATCAGGCCTACAA TERM 4584 3523805 - 3523840 + T 76 -8.2 -4.1899 | opp_overlap 3523817, overlap 3523774 3523807 3523808 CAACGATGCAAACCG TAGGTCGGATAAGGCG TTTA CGCCGCATCCGACATG TTTTCCCTCAAATCA TERM 4585 3523807 - 3523838 + T 72 -8.6 -3.69483 | opp_overlap 3523817, overlap 3523774 3523805 3523808 ACGATGCAAACCGTA GGTCGGATAAGGCG TTTA CGCCGCATCCGACA TGTTTTCCCTCAAAT TERM 4586 3523808 - 3523837 + T 79 -12.1 -2.81208 | opp_overlap 3523817, overlap 3523774 3523807 3523805 CGATGCAAACCGTAG GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATGTTTTCCCTCAAA EcSMS35_3446 3524893 - 3523853 - | putative permease EcSMS35_3447 3525601 - 3524966 - | NAD dependent epimerase/dehydratase family protein EcSMS35_3449 3525729 - 3526247 + | PfpI family intracellular peptidase EcSMS35_3448 3526670 - 3526227 - | hypothetical protein TERM 4587 3526508 - 3526518 + g 74 -8.2 -3.87914 | overlap 3526509 GCGGCCCACTCATCT GCGC GTG GCGC GTTTTTTCTTCCGTC TERM 4588 3526509 - 3526519 + g 100 -8.2 -5.4833 | overlap 3526508 CGGCCCACTCATCTG CGCG TGG CGCG TTTTTTCTTCCGTCA EcSMS35_3451 3526721 - 3527023 + | GIY-YIG catalytic domain-containing protein EcSMS35_3450 3527513 - 3527010 - | acetyltransferase TERM 4589 3527091 - 3527047 - G 95 -15.9 -2.93164 | opp_overlap 3527084, overlap 3527042 3527083 TGATACTCAACCAGA CCAGTTACACCGTTCAGCG CGTCATC CGCTAAACGATGTACCTGG AAGGCACTTTCAGTG EcSMS35_3452 3528031 - 3527507 - | sterol-binding protein EcSMS35_3453 3528134 - 3528021 - | hypothetical protein TERM 4590 3528646 - 3528668 + G 71 -9 -3.43676 | overlap 3528648 GCCATTTTGACGTTG CCCGCGTGGT GCT GCCGCGCGTG TTGTCGATTCATCAG TERM 4591 3528648 - 3528666 + G 72 -10.2 -3.28814 | overlap 3528646 CATTTTGACGTTGCC CGCGTGGT GCT GCCGCGCG TGTTGTCGATTCATC EcSMS35_3454 3528240 - 3529235 + | U32 family peptidase TERM 4592 3530050 - 3530038 - g 70 -5.5 -4.4078 | CCGCGCCAATGAAAA TGGCG CTG CACCA CTGCCGTTGACGGCA EcSMS35_3455 3529244 - 3530122 + | U32 family peptidase EcSMS35_3456 3530203 - 3531210 + | luciferase family monooxygenase mtr 3532573 - 3531329 - | tryptophan-specific transport protein TERM 4593 3531590 - 3531600 + g 70 -6.8 -4.07568 | opp_overlap 3531596 AGGCGGGGCAAAGGT CAGC AAC GCTG TTTTCAAGCGGCCCA TERM 4594 3531679 - 3531663 - G 82 -7.9 -4.48902 | AGATAGTCAAACAAA CCCAGCG TAA CGCCGAG GAACGAACTCGCTAC TERM 4595 3532546 - 3532519 - G 76 -10.6 -3.28712 | gap 1, opp_overlap 3532518 3532538 TGGTGCCGCCGATAA TCACCA-CGCCGC CAA GCAGCGACGGTGA CGTTTGGGTGGTGGT TERM 4596 3532659 - 3532685 + r 78 -10.9 -3.26836 | opp_overlap 3532661, overlap 3532657 3532655 3532653 3532661 CAAAAGACAGAAAAA AAGCCCCGATT ATTAA AATCGGGGCTG TATATATTATTTTAC TERM 4597 3532683 - 3532661 - R 100 -13.5 -5.82281 | opp_overlap 3532661 3532659 3532657 3532655 3532653 AAAGACAGAAAAAAA GCCCCGATT ATTAA AATCGGGGC TGTATATATTATTTT TERM 4598 3532661 - 3532683 + r 93 -13.5 -3.17888 | opp_overlap 3532661, overlap 3532659 3532657 3532655 3532653 AAAGACAGAAAAAAA GCCCCGATT ATTAA AATCGGGGC TGTATATATTATTTT deaD 3534616 - 3532727 - | cold-shock DEAD box protein A TERM 4599 3533372 - 3533388 + g 70 -6.5 -4.2558 | ATCCAGCTCTTCACC TTCTGCC GTC GGCTGAA TTTTGCTCAGCAGTG TERM 4600 3534761 - 3534736 - R 72 -7.5 -4.04023 | overlap 3534737 ATTAACGAACAACAA CGCCCTCACCC GTTA AGGTGATGGCA ATCAAAAAAGATTAC nlpI 3535680 - 3534796 - | lipoprotein NlpI TERM 4601 3535777 - 3535756 - R 100 -15.1 -4.07568 | CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC pnp 3537924 - 3535789 - | polyribonucleotide nucleotidyltransferase TERM 4602 3538132 - 3538150 + r 77 -7.3 -4.38712 | opp_overlap 3538133, overlap 3538133 CGTCAGCTTGAAAAA AGGGGCC ACTCA GGCCCCC TTTTCTGAAACTCGC TERM 4603 3538149 - 3538133 - R 100 -10.8 -5.03314 | opp_overlap 3538133 3538132 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG TERM 4604 3538133 - 3538149 + r 78 -10.8 -3.22906 | opp_overlap 3538133, overlap 3538132 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG rpsO 3538440 - 3538171 - | ribosomal protein S15 TERM 4605 3538275 - 3538296 + g 85 -2.9 -5.34555 | opp_overlap 3538277, overlap 3538277 3538278 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC truB 3539533 - 3538589 - | tRNA pseudouridine synthase B rbfA 3539934 - 3539533 - | ribosome-binding factor A TERM 4606 3539872 - 3539883 + g 75 -4.4 -4.82855 | overlap 3539864 TTCACGCTGCAGGAT GAGA GCGA TCTC TTTTTGCATTTCCTG TERM 4607 3539957 - 3539971 + r 100 -11.4 -4.68506 | opp_overlap 3539957 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4608 3539971 - 3539957 - R 100 -11.4 -5.24129 | opp_overlap 3539957 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4609 3540024 - 3540070 + r 74 -10.7 -2.57931 | opp_overlap 3540021 3540023 3540024 3540046, overlap 3540023 TTGGCCTGATAAGAC GCGCCAGCGTCGCATCAGGCA ATCCA TGCCGGATGCGGCGTAAACGC CTTATCCCGCATGGA TERM 4610 3540070 - 3540024 - R 74 -10.7 -2.52623 | opp_overlap 3540024 3540023, overlap 3540021 3540023 3540046 TTGGCCTGATAAGAC GCGCCAGCGTCGCATCAGGCA ATCCA TGCCGGATGCGGCGTAAACGC CTTATCCCGCATGGA TERM 4611 3540085 - 3540046 - R 89 -15 -3.09516 | opp_overlap 3540024 3540023, overlap 3540024 3540023 CGTCGCATCAGGCAA TCCATGCCGGATGCGGCG TAAA CGCCTTATCCCGCATGGA ACCCTAAAAACCTTA infB 3542770 - 3540098 - | translation initiation factor IF-2 nusA 3544282 - 3542795 - | transcription termination/antitermination factor NusA TERM 4612 3542936 - 3542926 - G 74 -8.2 -3.89346 | opp_overlap 3542931, overlap 3542927 CTTCCAGCGTACAAA CGCC ACG GGCG GCCAGTTTGAATGCC TERM 4613 3543029 - 3543047 + g 82 -7.4 -4.57569 | TTCTTCCTGGGCCTG TGCAATGG TGG CCAGTGCA TTTTTAGCACGCTCG EcSMS35_3466 3544774 - 3544310 - | hypothetical protein TERM 4614 3544799 - 3544787 - H 100 -6.9 -5.80248 | opp_overlap 3544786 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4615 3544827 - 3544844 + H 70 -6.9 -4.0641 | opp_overlap 3544828, overlap 3544828 GTCAGATAACAAAAA ACCCCGA TAAA TCGGGGC TTTATATAACTGAAC TERM 4616 3544843 - 3544828 - H 100 -10.4 -5.60689 | opp_overlap 3544827 3544828 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 4617 3544828 - 3544843 + H 73 -10.4 -3.03525 | opp_overlap 3544828, overlap 3544827 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA argG 3545393 - 3546736 + | argininosuccinate synthase TERM 4618 3546748 - 3546768 + T 70 -8.9 -3.25356 | opp_overlap 3546748, overlap 3546762 GTAATTCGACATCAA CCCTGCCCT TCA GGGGTGGGG TTACCTTGCTTATCC yhbX 3548261 - 3546744 - | inner membrane protein yhbX TERM 4619 3548821 - 3548790 - R 90 -11 -4.32436 | opp_overlap 3548796 3548798, overlap 3548791 3548798 AGACCAGGACCAAAA CGAAAAAAGACGCT TTTC AGCGTCTCTTTTCT GGAATTTGGTACCGA TERM 4620 3548820 - 3548791 - R 95 -14.5 -3.18738 | opp_overlap 3548796 3548798, overlap 3548790 3548798 GACCAGGACCAAAAC GAAAAAAGACGCT TTTC AGCGTCTCTTTTC TGGAATTTGGTACCG TERM 4621 3548796 - 3548815 + r 76 -6.4 -4.44974 | opp_overlap 3548791 3548790 3548798, overlap 3548798 GGACCAAAACGAAAA AAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 4622 3548798 - 3548813 + r 77 -9 -3.82551 | opp_overlap 3548798 3548791 3548790, overlap 3548796 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT TERM 4623 3548813 - 3548798 - R 100 -9 -5.48054 | opp_overlap 3548796 3548798, overlap 3548791 3548790 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT secG 3549261 - 3548929 - | preprotein translocase, SecG subunit TERM 4624 3549441 - 3549419 - R 81 -3.5 -5.41746 | gap 1 AACTGCGGAAAAAAA CAGCAAA-AC CGAT GTGTTCGCTG AGAAAAAAGGCGACA TERM 4625 3549450 - 3549465 + r 78 -6 -4.60255 | opp_overlap 3549450 3549452, overlap 3549449 TTCGCTGAGAAAAAA GGCGAC AATC GCCGCC TTTTTAGCCAGTTAT TERM 4626 3549462 - 3549450 - R 100 -9.1 -5.24129 | opp_overlap 3549449 3549450, overlap 3549452 TTCGCTGAGAAAAAA GGCGA CAA TCGCC GCCTTTTTAGCCAGT glmM 3550826 - 3549489 - | phosphoglucosamine mutase folP 3551667 - 3550819 - | dihydropteroate synthase TERM 4627 3551273 - 3551262 - G 70 -7.2 -4.0942 | opp_overlap 3551262 TATGCATCAGACAAA CCGG TAAA CCGG TTTCTGCAGCCGCCT TERM 4628 3551721 - 3551702 - R 100 -12.8 -5.56673 | opp_overlap 3551702 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA TERM 4629 3551702 - 3551721 + r 88 -10.6 -4.18494 | opp_overlap 3551702 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA hflB 3553700 - 3551757 - | ATP-dependent metallopeptidase HflB rrmJ 3554420 - 3553791 - | ribosomal RNA large subunit methyltransferase J TERM 4630 3554587 - 3554570 - g 90 -4.9 -5.34309 | gap 1, overlap 3554575 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG EcSMS35_3476 3554546 - 3554839 + | putative RNA-binding protein TERM 4631 3554925 - 3554952 + T 93 -13.6 -3.25946 | gap 1, opp_overlap 3554932, overlap 3554932 CACGCTCTGTTCGTT GATAAAAGGCCGC ATA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4632 3554946 - 3554932 - T 100 -12.8 -4.36914 | opp_overlap 3554925 3554932 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA TERM 4633 3554932 - 3554946 + T 100 -12.8 -5.13137 | opp_overlap 3554932, overlap 3554925 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA greA 3555471 - 3554995 - | transcription elongation factor GreA TERM 4634 3555033 - 3555044 + g 72 -7.2 -4.25104 | CTTCAAATTCTACTT CGCC GCCC GGCG TTTTGATGACCACAA TERM 4635 3555605 - 3555574 - H 100 -5.2 -5.98781 | gap 1, overlap 3555576 CAGAAGCAAAAAAAA TA-CCGACCCGGG TACAGGT CCCAGGTCAGCTA CAATTCACATTTTGA TERM 4636 3555602 - 3555576 - H 91 -9.4 -4.61485 | overlap 3555574 GAAGCAAAAAAAATA CCGACCCGGG TACAGGT CCCAGGTCAG CTACAATTCACATTT TERM 4637 3556528 - 3556512 - g 70 -5.8 -4.24326 | AAAGATGAGTTAAAA CAGGCG GGTAT CACCTG GAGCGGAACACTGCT dacB 3555720 - 3557153 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 4638 3557160 - 3557190 + T 85 -13.3 -2.74019 | opp_overlap 3557166, overlap 3557166 AACAATTAGTCTAAA GAGAAACCCCGGC GCATG GCCGGGGTTTTGC TGATTAACGCTTGTA TERM 4639 3557184 - 3557166 - T 100 -13.1 -4.33928 | opp_overlap 3557160 3557166 TAGTCTAAAGAGAAA CCCCGGC GCATG GCCGGGG TTTTGCTGATTAACG TERM 4640 3557166 - 3557184 + T 100 -13.1 -4.3534 | opp_overlap 3557166, overlap 3557160 TAGTCTAAAGAGAAA CCCCGGC GCATG GCCGGGG TTTTGCTGATTAACG EcSMS35_3479 3558366 - 3557194 - | GTP-binding protein Obg/CgtA TERM 4641 3557544 - 3557560 + g 72 -7.9 -3.91506 | opp_overlap 3557535 3557534, overlap 3557542 3557546 ACCAACGCGGTTTCG CCGCCAG ATC CTGGCTG TATTTTTCCAGCTCG TERM 4642 3557546 - 3557558 + g 71 -9.1 -3.54256 | opp_overlap 3557535 3557534, overlap 3557544 3557542 CAACGCGGTTTCGCC GCCAG ATC CTGGC TGTATTTTTCCAGCT EcSMS35_3480 3559347 - 3558382 - | putative transporter TERM 4643 3558614 - 3558577 - G 76 -9.1 -3.74198 | gap 1, overlap 3558570 AAAAAACAGCGTAAA CAGTG-GGGTGAGCGTGA TGA TCGCGCTCACCTGCGCTG CCTGCCAGCGAGCCA TERM 4644 3558973 - 3558925 - G 74 -3.3 -5.00884 | gap 3, overlap 3558911 3558900 3558928 ACTGGTGTTAAAAAA CATCAC-CAGGCCGCTCAGGAGCA TCAA TGCCCCT-A-CAACCTGAGTGCTG CGCATTTTCTCTTTC TERM 4645 3559424 - 3559445 + r 100 -15.9 -3.794 | opp_overlap 3559424 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG TERM 4646 3559445 - 3559424 - R 100 -15.9 -4.75174 | opp_overlap 3559424 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG rpmA 3559731 - 3559474 - | ribosomal protein L27 rplU 3560063 - 3559752 - | ribosomal protein L21 TERM 4647 3560861 - 3560833 - g 70 -5.1 -4.3586 | opp_overlap 3560851 TTATCTATAGCAAAA CCGCGCGTCTG TTTGAGG CTGCCGCGCAG TGTTCCGGGATTCTG ispB 3560322 - 3561293 + | octaprenyl-diphosphate synthase TERM 4648 3561308 - 3561326 + F 100 -16 -2.7386 | ATCCCCTCCCCCTCA TCCCGCGC AGT GCGCGGGA TGATTCCAATAAGTT sfsB 3561522 - 3561800 + | sugar fermentation stimulation protein B murA 3563107 - 3561848 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4649 3562605 - 3562627 + g 86 -10.6 -3.92075 | opp_overlap 3562603 GCAGCACACATGATG GTCACCGTTG CGC CAACGCTGAC TTTATCCATCACGAT EcSMS35_3486 3563431 - 3563162 - | BolA/YrbA family protein TERM 4650 3563258 - 3563281 + g 76 -3.8 -5.00884 | CGCAATATATTCCAT CAGCGGGC CATAGACC GTCTGCTG TTTTTTAACCCGACT TERM 4651 3563516 - 3563492 - R 86 -7.2 -5.05712 | gap 1, overlap 3563511 ATAAATAAGCAAAAA GCCTCG-CTGA TAAA TCAGACAAGGC TCGACTTGCAGGCAG yrbB 3563869 - 3563576 - | YrbB ttg2D 3564504 - 3563869 - | toluene tolerance protein Ttg2D EcSMS35_3489 3565074 - 3564523 - | Mce family protein TERM 4652 3565026 - 3565011 - G 79 -2.4 -5.30616 | overlap 3565013 TCAGGCAAACAAAAA GCGCCG CAAG CAGTGC TGCTAATAAAAAGAT EcSMS35_3490 3565861 - 3565079 - | toluene ABC transporter, permease protein EcSMS35_3491 3566678 - 3565869 - | toluene ABC transporter, ATP-binding protein TERM 4653 3567389 - 3567412 + G 90 -7.4 -4.87665 | gap 1 CTTGCAGAGCTGCCG CGTGAC-GGCG GAT TGCCCGTCGCG TTTTTATGGCTCGGC TERM 4654 3567726 - 3567737 + G 70 -4.4 -4.47888 | ACTACAGCGTGATGT TGCT GGTG AGCA TTATTTTTGCGTTGC EcSMS35_3492 3566888 - 3567865 + | sodium/calcium exchanger protein TERM 4655 3568795 - 3568813 + G 84 -11 -3.79138 | ATATCACCTCCGTGA TGGTTGCC GAT GGCGACCA TTTACTCGGTGTGTT kdsD 3567879 - 3568865 + | arabinose 5-phosphate isomerase TERM 4656 3569212 - 3569192 - g 82 -7.5 -4.46112 | opp_overlap 3569196, overlap 3569194 GGGCAGTCAAACAAA CTGATCGCC TTT AGCGATCTG CTGGAAAAACTGGCG kdsC 3568886 - 3569452 + | 3-deoxy-manno-octulosonate-8-phosphatase TERM 4657 3569541 - 3569530 - gf 70 -3.6 -4.59511 | AATATGGCCGAAAAA GACG ATAC CGCC CAGGTGGTCGTCAAC EcSMS35_3495 3569449 - 3570024 + | hypothetical protein TERM 4658 3570532 - 3570518 - gf 71 -3.4 -4.80417 | overlap 3570519 GACAAAAACAACAAA GGCCAG ACC CCGGCA CAGAAGAAGGGTAAT lptA 3569993 - 3570550 + | lipopolysaccharide ABC transporter, periplasmic lipopolysaccharide-binding protein lptB 3570557 - 3571282 + | lipopolysaccharide ABC transporter, ATP-binding protein TERM 4659 3571965 - 3571955 - g 75 -6.8 -4.42788 | opp_overlap 3571964 CCCAATTCGATAAAA CCAC GCC GTGG CTGGAAGAGGCCAGA rpoN 3571330 - 3572763 + | RNA polymerase sigma-54 factor yfiA 3572786 - 3573073 + | ribosomal subunit interface protein TERM 4660 3573101 - 3573127 + F 100 -13 -3.93236 | overlap 3573102 TTAGCATGTGCATGG CGGCCTGTTGTG CGG CACAACGGGCCA TTTGTACGGTTAATG TERM 4661 3573102 - 3573126 + F 100 -16.5 -2.95459 | overlap 3573101 TAGCATGTGCATGGC GGCCTGTTGTG CGG CACAACGGGCC ATTTGTACGGTTAAT TERM 4662 3573326 - 3573338 + G 81 -6.9 -4.61231 | overlap 3573322 AAACAACTTAGCCTG CCGCC TCA GGTGG TTTTTGAAGCTATCC TERM 4663 3573436 - 3573446 + G 81 -8.2 -4.42238 | overlap 3573437 3573441 AGAAGATACTCTGCG CGCC GTT GGCG TTTTCGTTCAGCTCG ptsN 3573191 - 3573682 + | PTS IIA-like nitrogen-regulatory protein PtsN TERM 4664 3573736 - 3573722 - f 76 -8.6 -3.96148 | CGTTGTGAGGAGAAA CAGTAC ATG GTACTG ATGATCGTCAGCGGA EcSMS35_3501 3573728 - 3574582 + | hypothetical protein TERM 4665 3574636 - 3574611 - g 88 -11.1 -4.13654 | overlap 3574614 TGTTGAAATCACAAA CAAGCTGGGCA TGCA TGCCCGGCCTG CAATGAAGCTGTTTG TERM 4666 3574633 - 3574614 - g 82 -9.2 -4.1851 | overlap 3574611 TGAAATCACAAACAA GCTGGGCA TGCA TGCCCGGC CTGCAATGAAGCTGT ptsO 3574579 - 3574851 + | phosphocarrier protein NPr TERM 4667 3574839 - 3574860 + F 71 -10.3 -2.75963 | overlap 3574838 CTTTAATTCTGGTTT TGATGAAGA TTAA TCTTCATCA CTTTGACATACAACT EcSMS35_3504 3575065 - 3575697 + | hypothetical protein mtgA 3576422 - 3575694 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 4668 3575795 - 3575756 - G 77 -8.4 -4.08394 | ACATCTGCCGTAAAA TCCACGCCTGACGGCTAC GCAC GTAGCCCGATGGCGCGGA GACTTTGAAACGAAG elbB 3577072 - 3576419 - | enhancing lycopene biosynthesis protein 2 TERM 4669 3577282 - 3577304 + r 83 -5.4 -5.19261 | overlap 3577283 3577285 TGGCGCAGTATTCGC GCACCCCGGT CTA GCCGGGGTCA TTTTTTAGTAGCTTT TERM 4670 3577283 - 3577303 + r 75 -8.9 -3.6993 | overlap 3577282 3577285 GGCGCAGTATTCGCG CACCCCGGT CTA GCCGGGGTC ATTTTTTAGTAGCTT TERM 4671 3577285 - 3577301 + r 83 -11.5 -3.41701 | overlap 3577283 3577282 CGCAGTATTCGCGCA CCCCGGT CTA GCCGGGG TCATTTTTTAGTAGC arcB 3579638 - 3577302 - | aerobic respiration control sensor protein ArcB TERM 4672 3577699 - 3577715 + g 70 -6.5 -4.2704 | GTACTCTCCTCATCA TCCTGGG TAT CCCAGAA TTTCTTGATCATCGC TERM 4673 3579035 - 3579059 + g 74 -2.8 -4.92239 | CCGGTGAGTAAACAT CAGCAGGTTT CAGGT GAACCAGTTG TTTTTCGCTTTTTCC EcSMS35_3507 3580663 - 3579734 - | radical SAM family protein TERM 4674 3580107 - 3580080 - G 73 -11.3 -2.60615 | overlap 3580079 3580077 AGCGTTTGCAAACAT TCAGCCTGCCC TTCGCC AGGCAGGCCGA CAATTAAGTGAGAAC TERM 4675 3580962 - 3580978 + H 72 -7.3 -4.03234 | opp_overlap 3580964 AACACGCCTTTATGA CAGTCAG GAA TTGACTG TTTCTCTAACGACGC TERM 4676 3581139 - 3581159 + H 71 -8.3 -3.54 | overlap 3581138 3581140 3581142 CGCTGGAAGCTTTCT GGATGAGCA GCC TGCTCATCA TATTTATGCAGTAAT TERM 4677 3581140 - 3581158 + H 79 -11.8 -2.71918 | overlap 3581139 3581138 3581142 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 4678 3581909 - 3581927 + G 70 -4.5 -4.56961 | gap 1, overlap 3581913 TAAAGGTCTGTGTAT GC-CGGCG GATC TGCCGCGC TTTTATCTGGATCTT TERM 4679 3582514 - 3582501 - g 72 -5.2 -4.58283 | overlap 3582503 GAAGTGGTCGAAAAA GGCC GCGTGG GGCC AGGCGAACTGATGGT TERM 4680 3584143 - 3584130 - g 70 -4.5 -4.55287 | gap 1, overlap 3584131 3584132 GTCATTCAGATAAAA GTCGCC CAG GGCG-C GAAGCCGGGTGAAGG gltB 3581244 - 3585797 + | glutamate synthase (NADPH), large subunit TERM 4681 3586270 - 3586254 - g 74 -2.1 -5.04385 | opp_overlap 3586264, overlap 3586256 CAGACCGGTAAAAAA GTGGCGA TTA TCGGCGC AGGCCCGGCGGGTCT TERM 4682 3586584 - 3586562 - g 74 -7.6 -4.07568 | overlap 3586568 CGGCGGGCTGGAAAA CGAAGACGCC GAT GGCGTGTACG CAGCGCTGCCGTTCC gltD 3585810 - 3587228 + | glutamate synthase (NADPH), small subunit TERM 4683 3587233 - 3587277 + F 74 -7.7 -4.07746 | opp_overlap 3587230 3587259, overlap 3587271 TGGAAGTTTAAATTG CAGCCTCCCGTGTAGCCCGCT TAA AACGGGTTACACGGGATAAAG TTATCTTTTTCCGAA TERM 4684 3588377 - 3588402 + G 84 -7.5 -4.65895 | AGCACTTTATCACCG GGCAAGTCTGC CAGG GCGCGCTTGCC TTTTTCCCTGGCGCA TERM 4685 3588675 - 3588687 + G 86 -10.5 -3.99324 | GTTACTGGCGGCCAG CGGCG GCG CGCCG TTTATGCTAATGGGG EcSMS35_3510 3587461 - 3588783 + | SWIM zinc finger domain-containing protein EcSMS35_3511 3588780 - 3590384 + | hypothetical protein TERM 4686 3590606 - 3590572 - g 73 -11.5 -2.54801 | gap 1, overlap 3590571 3590569 3590595 3590596 CACGCCGAAATATAT CGGCAACAGGCGGATT ATCG AAACCGCC-GTTGCCA CGCTGGCAACCGATC EcSMS35_3512 3590381 - 3591475 + | AAA family ATPase TERM 4687 3592648 - 3592622 - g 88 -5.1 -5.27779 | gap 1, opp_overlap 3592643, overlap 3592612 3592643 CGCAACAGCAAAAAA CGCT-GCGCCTG AAGG CAGAAGCCAGCG AAAAAGTGCTGGATC TERM 4688 3593551 - 3593567 + G 82 -7.9 -4.56597 | overlap 3593541 ATCCTGCCGATGCTG CGGCGGA CAT TCGGCCG TTTTTCCAGCCCGGA EcSMS35_3513 3591493 - 3593742 + | hypothetical protein EcSMS35_3514 3593732 - 3594901 + | VWA domain-containing protein TERM 4689 3595108 - 3595091 - T 79 -2.5 -5.44119 | opp_overlap 3595093, overlap 3595092 3595093 CTGAGGGCAAAAAAA GGCCCGC CGCA GCGGGTT ATTGAAATCTTTCAT TERM 4690 3595093 - 3595106 + T 77 -9.5 -3.69373 | opp_overlap 3595092 3595091 3595093 GAGGGCAAAAAAAGG CCCGC CGCA GCGGG TTATTGAAATCTTTC TERM 4691 3595106 - 3595093 - T 70 -9.5 -2.90726 | opp_overlap 3595093, overlap 3595092 3595091 GAGGGCAAAAAAAGG CCCGC CGCA GCGGG TTATTGAAATCTTTC EcSMS35_3515 3595269 - 3595123 - | hypothetical protein TERM 4692 3595699 - 3595686 - R 74 -3.1 -5.11613 | overlap 3595672 AGATGATTTAAAAAA TCTCC CTGC GGAAA TTCCTCAAATTCATC EcSMS35_3516 3596403 - 3595939 - | hypothetical protein EcSMS35_3517 3597275 - 3596400 - | ROK family protein EcSMS35_3518 3597961 - 3597272 - | putative N-acetylmannosamine-6-phosphate 2-epimerase TERM 4693 3598001 - 3597982 - R 74 -10.7 -2.78679 | overlap 3597981 TTCCCTTAGCGAAAG GCCCGGT ACATAG ACCGGGC AACAGGATTAACTTT nanT1 3599499 - 3598009 - | major facilitator superfamily transporter sialate:H(+) symporter TERM 4694 3599512 - 3599533 + r 100 -12.3 -3.8377 | gap 1 CATTGTGAGTCTCCC GCG-GTGGGC GAT GCCCACACGC TTTGGTATGAAAATT TERM 4695 3599610 - 3599561 - R 86 -13.1 -2.89683 | gap 1, opp_overlap 3599591 3599593 ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAA-AAACTCA CCCGCGCTCTTGCAT nanA 3600501 - 3599608 - | N-acetylneuraminate lyase nanR 3601405 - 3600623 - | transcriptional regulator NanR TERM 4696 3602471 - 3602460 - g 82 -3 -5.24129 | GCTTTCGACAAAAAA GATA AACA TATC AATCACGAACAGGCA TERM 4697 3603066 - 3603076 + G 78 -8.2 -4.15565 | ACGTCAGGAATTGCA GGCG TTT CGCC TTTTGCGGTAGTGAA EcSMS35_3522 3601794 - 3603161 + | putative anaerobic C4-dicarboxylate transporter DcuD TERM 4698 3603201 - 3603175 - T 93 -11.7 -3.9993 | opp_overlap 3603175 3603180, overlap 3603180 AAGCGATTAAAAAGA CAAAACAGGCC GCCAG GGCCTGTTTTA GTATTACTTCACAAC TERM 4699 3603196 - 3603180 - T 93 -9.4 -5.00027 | opp_overlap 3603175 3603180, overlap 3603175 ATTAAAAAGACAAAA CAGGCC GCCAG GGCCTG TTTTAGTATTACTTC TERM 4700 3603180 - 3603196 + T 89 -9.4 -4.46404 | opp_overlap 3603180 3603175, overlap 3603175 ATTAAAAAGACAAAA CAGGCC GCCAG GGCCTG TTTTAGTATTACTTC sspB 3603702 - 3603205 - | stringent starvation protein B sspA 3604346 - 3603708 - | stringent starvation protein A TERM 4701 3604701 - 3604688 - g 100 -9.5 -5.64274 | opp_overlap 3604688 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG TERM 4702 3604688 - 3604701 + G 95 -9.5 -5.03145 | opp_overlap 3604688 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG EcSMS35_3526 3604600 - 3604743 + | hypothetical protein rpsI 3605132 - 3604740 - | ribosomal protein S9 rplM 3605576 - 3605148 - | ribosomal protein L13 TERM 4703 3605438 - 3605453 + g 70 -6.8 -4.05446 | CACCGGTATCTACGT GCGGAG TGTA TTCCGC TTTGTGCTTACCGCG TERM 4704 3605754 - 3605772 + r 91 -8.8 -5.06735 | opp_overlap 3605752 GATTATAGAGAAGTC GGGGTCAA AGA TCGACCCC TTTTTGTGATTTGTG EcSMS35_3528 3606922 - 3605795 - | AFG1 family ATPase TERM 4705 3607377 - 3607354 - g 88 -11 -4.1413 | opp_overlap 3607354 AACACATGGCGAAAA GCTCCAGCAG CCTG CTGCCGGAAC TGTCTGCTGAAGCAA EcSMS35_3529 3607116 - 3607514 + | hypothetical protein TERM 4706 3607525 - 3607543 + F 82 -12.4 -2.83517 | ACTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTCTCCCT degQ 3607668 - 3609035 + | serine peptidase DegQ TERM 4707 3609045 - 3609074 + F 76 -10.7 -3.11192 | opp_overlap 3609045 CGTTAATGTCGTAAA CCGGGCATCAGGC TGAC GTGTGATGTCCGG TTAACTCGTGGTATG TERM 4708 3609891 - 3609866 - g 74 -8.3 -3.96827 | gap 1, opp_overlap 3609879, overlap 3609859 AAAATTATGGATAAA CTGATC-CGCGA TGG TCGCGTGATCCG CGGCTACATTGGTAT degS 3609125 - 3610192 + | periplasmic serine peptidase DegS TERM 4709 3610239 - 3610208 - T 100 -12.5 -4.07568 | opp_overlap 3610215, overlap 3610215 GTCGTGCGCTCAAAA CAAAAAACCGGAG TCTGTG CTCCGGTTTTTTA TTATCCGCTAATCAA TERM 4710 3610215 - 3610232 + T 100 -9.1 -5.55769 | opp_overlap 3610208 3610215 GCTCAAAACAAAAAA CCGGAGT CTGT GCTCCGG TTTTTTATTATCCGC TERM 4711 3610232 - 3610215 - T 100 -8.4 -5.79595 | opp_overlap 3610215, overlap 3610208 GCTCAAAACAAAAAA CCGGAG TCTGTG CTCCGG TTTTTTATTATCCGC TERM 4712 3610274 - 3610286 + T 71 -9.1 -3.41738 | opp_overlap 3610266, overlap 3610273 TTATTAACGAACTCT TCGCC CAG GGCGA TATCTTTCTTCAGCG mdh 3611193 - 3610255 - | malate dehydrogenase, NAD-dependent TERM 4713 3611474 - 3611493 + H 70 -7.2 -3.91897 | gap 1 TTTAAGCAGAATTTG CATGCCGTG ACG CA-GGCATG TTTCTCAATAACGAA argR 3611628 - 3612098 + | arginine repressor TERM 4714 3612101 - 3612131 + F 74 -9.6 -3.30039 | overlap 3612100 CCAGGAGCTTTAATC TCTGCCCCGTCGCT TCT GGCGGCGGGGAAAA TGTTGCTTATCCCTC TERM 4715 3612249 - 3612239 - f 81 -3.2 -5.45726 | CATACGGTAAAAAAA GCAC ATT ATGC AAAATCCATTATCTA TERM 4716 3612297 - 3612309 + F 89 -2.7 -5.64873 | TTATAATAAATAACC GTGTT TTT AATAC TTTTTTGTTATTAAA ycfR 3612463 - 3612726 + | protein YcfR TERM 4717 3612754 - 3612770 + T 100 -15.1 -5.78622 | opp_overlap 3612752 TTGTCCGACGATATT GCCCCCG GTT CGGGGGC TTTTTTTTGCGCTAA EcSMS35_3535 3613054 - 3612782 - | hypothetical protein TERM 4718 3613120 - 3613138 + r 100 -12.4 -4.29176 | opp_overlap 3613120 ATAGCCATGAAAAAA CCGACGCT TTT GGCGTCGG TTTTGACTTAACTAT TERM 4719 3613138 - 3613120 - R 100 -11.7 -5.17353 | opp_overlap 3613120 ATAGCCATGAAAAAA CCGACGC TTTTG GCGTCGG TTTTGACTTAACTAT aaeB 3615113 - 3613146 - | p-hydroxybenzoic acid efflux pump subunit aaeB aaeA 3616051 - 3615119 - | p-hydroxybenzoic acid efflux pump subunit aaeA TERM 4720 3615824 - 3615838 + g 76 -4.2 -5.0133 | CGGCTGGTCGATGGT GAACAG TAC CTGTCC TTTTTTCACCAGCTG aaeX 3616331 - 3616059 - | protein AaeX aaeR 3616445 - 3617374 + | transcriptional activator AaeR tldD 3618947 - 3617502 - | protein TldD TERM 4721 3618357 - 3618328 - G 74 -6.3 -4.50661 | gap 1, opp_overlap 3618344 AACTCATAACCAAAA CGACCGCCGCCGCC ACT GGC-ACCGCGTTCG CGTTTGCCATCTTCT TERM 4722 3618497 - 3618519 + g 72 -9.8 -3.28712 | TCACTTCTTGTACGC GCTTGTCCGC TTC GCGGGCAACC TTATCGACGCGACGC TERM 4723 3618655 - 3618673 + g 76 -8.1 -4.15044 | overlap 3618661 CTATCACGGACGATG GTGCGCG CCGCT TGCGCAC TTTGTTCCAGCGCCA TERM 4724 3618990 - 3619029 + r 70 -9.8 -2.85459 | overlap 3618989 3619017 GTAGAGGATTTTTTA CGGCTGCCGGATGCGGCG TGAA CGCCCTATCCGGCCTACG GTTATGTTCTGGCTC EcSMS35_3541 3622903 - 3619103 - | hypothetical protein TERM 4725 3619721 - 3619732 + g 74 -5.8 -4.54727 | opp_overlap 3619702 GGCGGCATCAATTTT CTGC CCAC GCAG TTTTCCTTTCAGCGA TERM 4726 3620060 - 3620072 + g 71 -9.1 -3.51411 | overlap 3620056 CGCGTTATTACGCAT CGCCA GCG TGGCG TTGATTTCACGCCCT cafA 3624440 - 3622971 - | ribonuclease G TERM 4727 3624027 - 3624010 - G 75 -11.3 -3.01924 | GATTCGCTTTCAATA CGTTGGG ATAC CCCAACG TGAGAAGCACCTGGC maf1 3625023 - 3624430 - | septum formation protein Maf lytS 3625520 - 3625032 - | rod shape-determining protein MreD mreC 3626623 - 3625520 - | rod shape-determining protein MreC TERM 4728 3626300 - 3626329 + g 76 -7.7 -4.27117 | opp_overlap 3626302, overlap 3626308 ACGCAGCGGGGAACC CAGCAGTTCGCGC AGAC GCGCGTTCTCCTG TTTGTATTGTCCAAG TERM 4729 3626308 - 3626321 + g 73 -9.5 -3.59627 | opp_overlap 3626302, overlap 3626300 GGGAACCCAGCAGTT CGCGC AGAC GCGCG TTCTCCTGTTTGTAT TERM 4730 3626682 - 3626649 - R 79 -11.7 -2.78596 | opp_overlap 3626644, overlap 3626652 TATTCTCGTATCAGA CCAGGCAGGGTAAAC AGAC GCTTCCCCTGCCTGC ATCCGATTACTCTTC TERM 4731 3626679 - 3626652 - R 79 -12 -2.66316 | opp_overlap 3626644, overlap 3626649 TCTCGTATCAGACCA GGCAGGGTAAAC AGAC GCTTCCCCTGCC TGCATCCGATTACTC mreB 3627732 - 3626689 - | rod shape-determining protein MreB TERM 4732 3627484 - 3627501 + g 74 -8.3 -3.90291 | opp_overlap 3627484, overlap 3627486 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4733 3627501 - 3627484 - G 72 -8.3 -3.73647 | opp_overlap 3627484 3627486 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4734 3627486 - 3627499 + g 71 -9.5 -3.54146 | opp_overlap 3627484, overlap 3627484 CAGTCACGAAGAAGT CGGCG ATAA CGCCG TCTTTCATTGGGCGA EcSMS35_3547 3629977 - 3628037 - | cyclic diguanylate phosphodiesterase domain-containing protein TERM 4735 3628755 - 3628738 - G 72 -8.3 -3.85698 | CCGGTTTTTGATAAA GGCGCGG GCCG CCGCGAC TCAGCATTTGCTCGA TERM 4736 3630838 - 3630890 + G 70 -5.7 -4.33819 | gap 3, overlap 3630831 ATTACGGCGGCTGCG TGGCG-GCCTGTGGTCTGGC-GGGTG GTTT TACTCTGCCA-ACCACGGTCATGCCA TTTATTCTGCGTAAT EcSMS35_3548 3630129 - 3631103 + | quinone oxidoreductase EcSMS35_3549 3631140 - 3631970 + | hypothetical protein TERM 4737 3631977 - 3632006 + F 75 -10.7 -2.95476 | opp_overlap 3631976, overlap 3631986 TTGCATTAACGCAAC CTCCGTCATGCTT GAAA AAGCTTGTCGGAG TATGTGATGAATGCT TERM 4738 3632036 - 3632058 + F 100 -10.6 -5.55769 | opp_overlap 3632036 TGCAAACTCACCGAA GCCGATTTTG CCA CCAAATCGGC TTTTTTATTGTCACG TERM 4739 3632058 - 3632036 - f 76 -10.6 -3.11732 | opp_overlap 3632036 TGCAAACTCACCGAA GCCGATTTTG CCA CCAAATCGGC TTTTTTATTGTCACG accB 3632836 - 3633306 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 4740 3633811 - 3633794 - g 72 -8.3 -3.84246 | CCGGTAATTATCAAA GCCTCCG GCGG CGGCGGC GGTCGCGGTATGCGC TERM 4741 3634268 - 3634250 - g 74 -8 -4.00756 | GACCTGATCAAAGAA CAGCTGCG TAT CGCTGCCG GTCAACCGCTGTCGA accC 3633317 - 3634666 + | acetyl-CoA carboxylase, biotin carboxylase TERM 4742 3634686 - 3634702 + F 100 -13.7 -5.5112 | opp_overlap 3634686 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG TERM 4743 3634702 - 3634686 - f 100 -13.7 -4.19276 | opp_overlap 3634686 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG EcSMS35_3552 3634775 - 3635017 + | hypothetical protein panF 3635007 - 3636458 + | sodium/pantothenate symporter TERM 4744 3636533 - 3636561 + G 77 -8.9 -4.11216 | opp_overlap 3636498 3636542, overlap 3636534 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 4745 3636534 - 3636560 + G 79 -12.4 -3.06515 | opp_overlap 3636498 3636542, overlap 3636533 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3636470 - 3637351 + | ribosomal protein L11 methyltransferase TERM 4746 3637445 - 3637405 - f 70 -5.5 -4.43189 | AGCAAGGTCACAAAA GGCACGTTAATTTGC CGATTATTTAC GCAAATTTGCGTGCC AAAATTTTCATTCAT TERM 4747 3637485 - 3637470 - f 81 -3.3 -5.38958 | opp_overlap 3637470 3637479, overlap 3637477 3637478 3637481 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTTGAGTATA TERM 4748 3637645 - 3637631 - f 74 -4.2 -5.00884 | overlap 3637632 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG dusB 3637680 - 3638645 + | tRNA-dihydrouridine synthase B fis 3638671 - 3638967 + | DNA-binding protein Fis TERM 4749 3638997 - 3639022 + F 91 -8.2 -5.29782 | opp_overlap 3638997 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4750 3639022 - 3638997 - f 78 -6 -4.7254 | opp_overlap 3638997 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4751 3639888 - 3639874 - g 88 -5.6 -5.21683 | AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCAGGTT EcSMS35_3557 3639053 - 3639937 + | N4/N6-methyltransferase family DNA methylase EcSMS35_3558 3640087 - 3640200 + | hypothetical protein EcSMS35_3559 3640865 - 3640203 - | putative transcriptional regulator EnvR acrE 3641264 - 3642421 + | acriflavine resistance protein E TERM 4752 3645566 - 3645539 - f 74 -7.1 -4.18303 | opp_overlap 3645541 3645545, overlap 3645541 3645545 AGGATAAATCAGAAA CATAAAGGCAC TTTCGG GTGCCTTTATT ATTTTCAGTGAAACC TERM 4753 3645564 - 3645541 - f 77 -9.7 -3.67823 | opp_overlap 3645541 3645545, overlap 3645539 3645545 GATAAATCAGAAACA TAAAGGCAC TTTCGG GTGCCTTTA TTATTTTCAGTGAAA TERM 4754 3645541 - 3645564 + F 85 -10.4 -4.21812 | opp_overlap 3645541 3645539 3645545, overlap 3645545 GATAAATCAGAAACA TAAAGGCACT TTCG GGTGCCTTTA TTATTTTCAGTGAAA TERM 4755 3645545 - 3645560 + F 79 -6.8 -4.68601 | opp_overlap 3645541 3645539 3645545, overlap 3645541 AATCAGAAACATAAA GGCACT TTCG GGTGCC TTTATTATTTTCAGT TERM 4756 3645560 - 3645545 - f 73 -6.1 -4.42513 | opp_overlap 3645545 3645541, overlap 3645541 3645539 AATCAGAAACATAAA GGCAC TTTCGG GTGCC TTTATTATTTTCAGT EcSMS35_3562 3645783 - 3646004 + | putative lipoprotein TERM 4757 3646038 - 3646005 - f 100 -16.1 -3.90744 | opp_overlap 3646010, overlap 3646010 GCTCTGTCGAAATAA CTGAACAGAGCGCGG AGTA CCGCGCTCTGTTTAA CGATACAGTATCTCA TERM 4758 3646010 - 3646033 + F 100 -18.2 -3.57462 | opp_overlap 3646010 3646005 GTCGAAATAACTGAA CAGAGCGCGG AGTA CCGCGCTCTG TTTAACGATACAGTA TERM 4759 3646033 - 3646010 - f 100 -18.2 -3.33509 | opp_overlap 3646010, overlap 3646005 GTCGAAATAACTGAA CAGAGCGCGG AGTA CCGCGCTCTG TTTAACGATACAGTA TERM 4760 3646231 - 3646249 + F 78 -10.3 -3.695 | opp_overlap 3646219 3646228 3646226, overlap 3646229 AACGCGTAAATATTT TGCGCCA AAATG TGGCGCA TGTTTCATTTTCGCA EcSMS35_3563 3646435 - 3647460 + | amino acid ABC transporter, periplasmic amino acid-binding protein TERM 4761 3647477 - 3647498 + F 87 -13.7 -3.07233 | opp_overlap 3647476 3647479, overlap 3647479 3647494 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC TERM 4762 3647479 - 3647496 + F 73 -10.5 -3.09135 | opp_overlap 3647476 3647479, overlap 3647477 3647494 GGTGTGAGGTAACGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT TERM 4763 3648046 - 3648070 + G 75 -7.1 -4.30933 | TCGTGGGCTTTATAT TCCGTCGCC GCAGCTG GGAGACGGA TTTATTGCGTTTATC TERM 4764 3648182 - 3648156 - g 81 -5 -5.02502 | opp_overlap 3648164, overlap 3648157 3648164 CATACCAGATAAAAA CCGGACAACTGC GCC GCACCTGGCCGA TCGCCGCAGTGTTGA EcSMS35_3564 3647528 - 3648709 + | His/Glu/Gln/Arg/opine ABC transporter permease EcSMS35_3565 3648719 - 3649822 + | His/Glu/Gln/Arg/opine ABC transporter permease EcSMS35_3566 3649830 - 3650588 + | amino acid ABC transporter, ATP-binding protein TERM 4765 3650635 - 3650616 - f 100 -13.6 -4.81249 | opp_overlap 3650616 TTCGAAACGCAAAAA GGCCATCC TTTT GGATGGCC TTTCGCTTGATTTGA TERM 4766 3650616 - 3650635 + F 100 -13.6 -3.83214 | opp_overlap 3650616 TTCGAAACGCAAAAA GGCCATCC TTTT GGATGGCC TTTCGCTTGATTTGA TERM 4767 3651026 - 3651047 + F 100 -14.5 -3.95449 | opp_overlap 3651018 3651031 GGCAAATTCTGTTTA TCAGACCGC TTCT GCGGTCTGA TTTAATCTGTTATCA TERM 4768 3652214 - 3652225 + F 71 -4.4 -4.7254 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTAATAAACAGT TERM 4769 3653515 - 3653527 + F 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4770 3654069 - 3654093 + F 72 -8 -3.93061 | gap 1, opp_overlap 3654075 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4771 3654132 - 3654169 + F 100 -6.3 -5.68438 | opp_overlap 3654128 3654134, overlap 3654134 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4772 3654167 - 3654134 - f 77 -6.7 -4.49756 | opp_overlap 3654134 3654132, overlap 3654128 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4773 3654134 - 3654167 + F 88 -8.9 -4.47052 | opp_overlap 3654128 3654134, overlap 3654132 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4774 3656179 - 3656191 + F 72 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4775 3656211 - 3656225 + F 100 -4.2 -5.61913 | opp_overlap 3656211, overlap 3656200 3656212 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTTCTCTTTGTT TERM 4776 3656212 - 3656224 + F 72 -7.7 -3.93487 | opp_overlap 3656211, overlap 3656200 3656211 TCTTTCAGAGTCAAC CCTGA ATT TCAGG ATTTTTTCTCTTTGT EcSMS35_3576 3656471 - 3657025 + | hypothetical protein EcSMS35_3575 3657258 - 3657001 - | hypothetical protein aroE 3658073 - 3657255 - | shikimate 5-dehydrogenase EcSMS35_3578 3658650 - 3658078 - | Sua5/YciO/YrdC/YwlC family protein EcSMS35_3579 3659197 - 3658655 - | topoisomerase DNA-binding C4 zinc finger domain-containing protein TERM 4777 3658710 - 3658700 - G 70 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 4778 3659071 - 3659035 - G 89 -13.1 -3.34233 | overlap 3659038 3659064 CCAGAACTTTGACAA TATGTCCATCCGCTGAA GAT TTCAGAGGACGGACGTA GTCACACGCCGGATA TERM 4779 3659068 - 3659038 - G 89 -14.8 -2.53747 | overlap 3659035 3659064 GAACTTTGACAATAT GTCCATCCGCTGAA GAT TTCAGAGGACGGAC GTAGTCACACGCCGG smg 3659699 - 3659226 - | protein Smg dprA 3660795 - 3659671 - | DNA protecting protein DprA def 3660925 - 3661434 + | peptide deformylase TERM 4780 3661495 - 3661517 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 4781 3661597 - 3661587 - g 74 -3.2 -5.02074 | GGACGCGGTAAAAAA CTGA TGC CCAG CCCGGTTAAAGTTCT TERM 4782 3661680 - 3661670 - g 85 -6.8 -4.77165 | overlap 3661671 GCGTCCACAAGAAAA CCAG CAA CTGG TCGCCGATCTACAGG fmt 3661449 - 3662396 + | methionyl-tRNA formyltransferase TERM 4783 3662412 - 3662430 + F 87 -8 -5.01535 | overlap 3662413 TAGTCCACTCTTCTA AGCCCGGT CTT GCCGGGCA TTTTTATACTTATGA TERM 4784 3662413 - 3662429 + F 87 -11.5 -3.59837 | overlap 3662412 AGTCCACTCTTCTAA GCCCGGT CTT GCCGGGC ATTTTTATACTTATG TERM 4785 3662467 - 3662451 - g 88 -5.1 -5.17353 | overlap 3662454 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCCCAGGC TERM 4786 3662464 - 3662454 - g 75 -5.4 -4.67552 | overlap 3662451 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCCCA TERM 4787 3662590 - 3662604 + G 77 -10 -3.60971 | opp_overlap 3662559 AAGAGTTGTGCTTTG GCGTAC TGC GTACGC TTTCACAGTTAGACT rsmB 3662442 - 3663731 + | ribosomal RNA small subunit methyltransferase B trkA 3663753 - 3665129 + | Trk system potassium uptake protein TrkA TERM 4788 3665131 - 3665158 + F 100 -15.8 -3.89938 | opp_overlap 3665134 3665137, overlap 3665134 3665137 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT TERM 4789 3665134 - 3665155 + F 100 -13.1 -4.05629 | opp_overlap 3665134 3665137, overlap 3665131 3665137 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4790 3665155 - 3665134 - f 95 -13.1 -3.33696 | opp_overlap 3665134 3665131 3665137, overlap 3665137 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4791 3665152 - 3665137 - f 80 -10.4 -3.81146 | opp_overlap 3665137 3665134 3665131, overlap 3665134 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4792 3665137 - 3665152 + F 82 -10.4 -4.13254 | opp_overlap 3665134 3665137, overlap 3665134 3665131 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT mscL 3665259 - 3665669 + | large conductance mechanosensitive channel protein TERM 4793 3665732 - 3665686 - T 100 -19.7 -2.90992 | overlap 3665689 AAGCGCCTGAAAGCA GAAGGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCCCGATTG TERM 4794 3665729 - 3665689 - T 100 -17.8 -3.60151 | overlap 3665686 CGCCTGAAAGCAGAA GGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCCCGA zntR 3666365 - 3665940 - | Zn(II)-responsive transcriptional regulator EcSMS35_3588 3666744 - 3666376 - | hypothetical protein TERM 4795 3666807 - 3666840 + r 85 -11.9 -3.37879 | opp_overlap 3666803 3666817, overlap 3666808 3666817 TGGGGATACTACGGG TATAAAAAAACCCGC CGGG GCGGGTTTTTTTACG TTGCTTCAGATTACT TERM 4796 3666808 - 3666839 + r 84 -13.2 -2.62246 | opp_overlap 3666803 3666817, overlap 3666807 3666817 GGGGATACTACGGGT ATAAAAAAACCCGC CGGG GCGGGTTTTTTTAC GTTGCTTCAGATTAC TERM 4797 3666830 - 3666817 - R 100 -9.5 -5.61596 | opp_overlap 3666808 3666807 3666817, overlap 3666803 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4798 3666817 - 3666830 + r 100 -9.5 -5.54192 | opp_overlap 3666803 3666817, overlap 3666808 3666807 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4799 3666840 - 3666865 + r 72 -8.3 -3.67102 | overlap 3666861 GGCGGGTTTTTTTAC GTTGCTTCAGA TTAC TCTGCAGCAGC TTCTGCTTTCTCTGA TERM 4800 3666861 - 3666871 + r 70 -6.8 -4.0371 | overlap 3666840 TCAGATTACTCTGCA GCAG CTT CTGC TTTCTCTGAACGATC rplQ 3667234 - 3666851 - | ribosomal protein L17 rpoA 3668264 - 3667275 - | DNA-directed RNA polymerase, alpha subunit TERM 4801 3667358 - 3667370 + g 74 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCAAGGTT TERM 4802 3668305 - 3668287 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3668910 - 3668290 - | ribosomal protein S4 TERM 4803 3668400 - 3668410 + g 70 -6.8 -4.12188 | overlap 3668397 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4804 3668937 - 3668955 + r 75 -4.4 -5.00616 | opp_overlap 3668928 3668937 AACAAACCTGGAAAA CGAGGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3669333 - 3668944 - | ribosomal protein S11 TERM 4805 3669367 - 3669392 + r 71 -8.9 -3.39449 | overlap 3669368 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 4806 3669368 - 3669391 + r 70 -10.2 -2.63348 | overlap 3669367 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG rpsM 3669706 - 3669350 - | ribosomal protein S13p TERM 4807 3669531 - 3669549 + g 77 -8.8 -4.05446 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTCCTTCAGACA TERM 4808 3669823 - 3669794 - R 100 -12.3 -4.6645 | gap 1 CACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ1 3669969 - 3669853 - | ribosomal protein L36 secY 3671332 - 3670001 - | preprotein translocase, SecY subunit TERM 4809 3670534 - 3670488 - G 73 -9.4 -3.56921 | opp_overlap 3670494 3670502, overlap 3670486 GGGAACAGAATAATA CTGGAAGCGAAGATTGCCGGGA TTA CCCCCGCCATATTCACTTTCAG CGGTAAATGTGTGCT TERM 4810 3670899 - 3670868 - G 74 -10.2 -3.51032 | opp_overlap 3670874, overlap 3670874 AGCGGTGAAGTAGAA TGCAAAGCCCGG GTTAATCA CCAGGCCTTGCA TACCAGGCATATTCG rplO 3671774 - 3671340 - | ribosomal protein L15 TERM 4811 3671720 - 3671733 + g 75 -5.2 -4.59853 | opp_overlap 3671713, overlap 3671713 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3671957 - 3671778 - | ribosomal protein L30 rpsE 3672464 - 3671961 - | ribosomal protein S5 rplR 3672832 - 3672479 - | ribosomal protein L18 rplF 3673375 - 3672842 - | ribosomal protein L6 rpsH 3673780 - 3673388 - | ribosomal protein S8 rpsN 3674119 - 3673814 - | ribosomal protein S14p rplE 3674673 - 3674134 - | ribosomal protein L5 TERM 4812 3674511 - 3674529 + g 93 -6 -5.24531 | TTGCTGCCAGGTCTG CTGCTG CGTTATC CAGCAG TTTTTTGTCAGCGAT TERM 4813 3674617 - 3674628 + g 81 -4.4 -5.12617 | opp_overlap 3674617, overlap 3674596 AGAATTGTAGTTAAA CTCA GTCA TGAG TTTTTTAACTACTTC rplX 3675002 - 3674688 - | ribosomal protein L24 rplN 3675384 - 3675013 - | ribosomal protein L14 TERM 4814 3675499 - 3675524 + r 95 -14.9 -3.25823 | opp_overlap 3675499, overlap 3675503 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4815 3675524 - 3675499 - R 100 -14.9 -5.252 | opp_overlap 3675499 3675503 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4816 3675503 - 3675520 + r 93 -11.3 -4.29106 | opp_overlap 3675499, overlap 3675499 GGTAGAAAAAATAAA CGGCTCA TTTC TGAGCCG TTTATTCGTATCGAG rpsQ 3675803 - 3675549 - | ribosomal protein S17 TERM 4817 3675771 - 3675724 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 3675743 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA rpmC 3675994 - 3675803 - | ribosomal protein L29 rplP 3676404 - 3675994 - | ribosomal protein L16 rpsC 3677118 - 3676417 - | ribosomal protein S3 rplV 3677468 - 3677136 - | ribosomal protein L22 rpsS 3677761 - 3677483 - | ribosomal protein S19 rplB 3678599 - 3677778 - | ribosomal protein L2 TERM 4818 3678635 - 3678655 + r 77 -9.7 -3.57462 | opp_overlap 3678638, overlap 3678638 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3678919 - 3678617 - | ribosomal protein L23 TERM 4819 3678886 - 3678874 - G 78 -9.1 -3.85817 | ACGCTTTTTCAGAAA CGTGC GGT GCACG CAGCACCTTCAGCAG rplD 3679521 - 3678916 - | ribosomal protein L4 TERM 4820 3679489 - 3679501 + g 78 -10.5 -3.42663 | opp_overlap 3679484, overlap 3679488 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3680161 - 3679532 - | ribosomal protein L3 rpsJ 3680505 - 3680194 - | ribosomal protein S10 TERM 4821 3681311 - 3681276 - g 82 -3 -5.17353 | opp_overlap 3681276 AGAGTCATTAAAAAA CCCGCTGCCGTTTG GGCCATTT CTGGCGGCTGCGGG TTTCGTTGTAGGCTG TERM 4822 3681276 - 3681311 + G 74 -8.8 -4.00124 | opp_overlap 3681276 AGAGTCATTAAAAAA CCCGCTGCCGTTTGGG CCAT TTCTGGCGGCTGCGGG TTTCGTTGTAGGCTG EcSMS35_3618 3680884 - 3681351 + | A24 family peptidase TERM 4823 3681347 - 3681359 + T 79 -4.9 -5.04733 | GTTTGCTGGCAGGCC GTTAA TCT TTAAC TTTTATTTGTGATTG bfr 3681824 - 3681348 - | bacterioferritin TERM 4824 3681665 - 3681641 - G 79 -2.2 -5.26119 | gap 1, opp_overlap 3681641 3681643, overlap 3681636 3681643 CTTCTAAAAACAAAA TACGCTCGATA TATT TATC-AGCGTG TTTCATCTCATCAAT bfd 3682091 - 3681897 - | bacterioferritin-associated ferredoxin TERM 4825 3682244 - 3682229 - R 85 -8.2 -4.72986 | opp_overlap 3682229 TACGGGCAGCAAAAA GGACGC CGAA GCGCCC TTTTTAATTCGAAAC TERM 4826 3682229 - 3682244 + r 80 -6 -4.8622 | opp_overlap 3682229 TACGGGCAGCAAAAA GGACGC CGAA GCGCCC TTTTTAATTCGAAAC tuf2 3683458 - 3682274 - | translation elongation factor Tu TERM 4827 3683237 - 3683287 + g 74 -2.5 -5.06414 | overlap 3683207 3683239 GTGTGCGTAGTGACG GGTCGGGGTGTCATATTCAACGT GAGAA GTGTTGATGGTGATACCACGAGC TTTTTCTTCCGGCGC TERM 4828 3683503 - 3683478 - R 93 -15.5 -2.78935 | opp_overlap 3683474 3683473 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA fusA 3685643 - 3683529 - | translation elongation factor G TERM 4829 3685715 - 3685690 - R 87 -11.2 -3.63895 | gap 1, opp_overlap 3685680, overlap 3685680 TTTAAGTAGCCCAAA GCGGGCTGCTT ACTGG AAGC-GCCCGC CTGGTGACTAAAACT rpsG 3686210 - 3685740 - | ribosomal protein S7 rpsL 3686681 - 3686307 - | ribosomal protein S12 TERM 4830 3686751 - 3686729 - R 100 -12.8 -4.7268 | AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG dsrH 3687094 - 3686807 - | sulfur relay protein TusD/DsrH tusC 3687461 - 3687102 - | sulfur relay protein TusC/DsrF tusD 3687847 - 3687461 - | sulfurtransferase TusD EcSMS35_3627 3688569 - 3687847 - | hypothetical protein TERM 4831 3688364 - 3688395 + g 76 -7.4 -4.21194 | gap 1 ATCTTCCGGCCTGTA TGTTCA-CCGTTAGC AAT GCGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4832 3688594 - 3688581 - R 79 -6.7 -4.59226 | opp_overlap 3688591 3688592 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTAACTTT TERM 4833 3688653 - 3688665 + r 73 -9.1 -3.54919 | opp_overlap 3688651 3688649 3688653 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 4834 3688665 - 3688653 - R 70 -9.1 -3.24804 | opp_overlap 3688653, overlap 3688651 3688649 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 4835 3688692 - 3688735 + r 71 -4.7 -4.61482 | gap 2, opp_overlap 3688704, overlap 3688693 3688704 AATTATATCCGGCCT GTAATAAAAAAACCGCCGCCT GGTC AGGCGGCGG--TTCTTAATGC TTATTTTTTAGCAGA TERM 4836 3688693 - 3688738 + r 74 -4.2 -5.0133 | gap 2, opp_overlap 3688704, overlap 3688692 3688704 ATTATATCCGGCCTG TAA-TA-AAAAAACCGCCGCCT GGTC AGGCGGCGGTTCTTAATGCTTA TTTTTTAGCAGAATC TERM 4837 3688704 - 3688725 + r 100 -17.3 -3.79396 | opp_overlap 3688704, overlap 3688692 3688693 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT TERM 4838 3688725 - 3688704 - R 100 -17.3 -5.7946 | opp_overlap 3688692 3688693 3688704 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT fkpA 3689548 - 3688736 - | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA EcSMS35_3629 3689769 - 3689987 + | slyX protein TERM 4839 3689993 - 3690022 + T 87 -13.7 -2.85763 | opp_overlap 3690000, overlap 3690000 ACATTATTGAGGCGT AAAAAAAGCGGGG ATTC CCCCGCTTTTTTG TCACTTTTTCGGTAT TERM 4840 3690015 - 3690000 - T 100 -11.8 -5.42259 | opp_overlap 3689993 3690000 TGAGGCGTAAAAAAA GCGGGG ATTC CCCCGC TTTTTTGTCACTTTT TERM 4841 3690000 - 3690015 + T 100 -11.8 -5.35222 | opp_overlap 3690000, overlap 3689993 TGAGGCGTAAAAAAA GCGGGG ATTC CCCCGC TTTTTTGTCACTTTT slyD 3690627 - 3690037 - | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD TERM 4842 3690601 - 3690612 + g 72 -5.8 -4.39989 | overlap 3690585 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT EcSMS35_3631 3690922 - 3690722 - | hypothetical protein kefB 3692737 - 3690932 - | glutathione-regulated potassium-efflux system protein KefB TERM 4843 3692253 - 3692234 - G 77 -10 -3.63569 | CGAACCCGCCAACAA CGGCACTA ACGC CAGTGCCG GGATCACCGCCAGAT kefG 3693288 - 3692737 - | glutathione-regulated potassium-efflux system ancillary protein kefG TERM 4844 3694716 - 3694692 - g 73 -9.3 -3.60798 | overlap 3694704 AGGGCGATAAAGTAA CCGAAGAAACA CGC CGCTTCTCCGG TGGGGAAAAAGCCCG TERM 4845 3694743 - 3694727 - g 70 -5 -4.56597 | opp_overlap 3694727, overlap 3694704 TCCGGTGGGGAAAAA GCCCGC CTGGT GCTGGC ATTAATTGTCTGGCA EcSMS35_3634 3693419 - 3695332 + | ABC transporter, ATP-binding protein TERM 4846 3695485 - 3695498 + G 70 -4.5 -4.45083 | TGGCAGCGGCTGGAG TTGCC CGAC GGCGA TTTTGTCGATCTCGC EcSMS35_3635 3695332 - 3696354 + | alpha/beta fold family hydrolase TERM 4847 3696486 - 3696462 - g 78 -8.5 -4.20769 | ACACTTGAACAGAAA GTCGCCGACGT CAA ACGCCAGCTAC AGTGCGGAGAAGCGG EcSMS35_3636 3696348 - 3696566 + | hypothetical protein EcSMS35_3637 3696620 - 3697489 + | phosphoribulokinase/uridine kinase family protein EcSMS35_3638 3697948 - 3697544 - | OsmC family protein TERM 4848 3697894 - 3697882 - G 76 -7.7 -4.25104 | TGCCGTCCATTAAAA TCTGG TGA CCAGA GGCGGATTCGCCCAG TERM 4849 3698360 - 3698335 - g 70 -10.5 -2.76171 | overlap 3698332 ACCCATCCAAGAGCA CGCTTATTCAC CAGG GTGAAAAAGCG GAAACGCTGTACTAC crp 3698250 - 3698882 + | catabolite gene activator TERM 4850 3698894 - 3698918 + F 100 -16.5 -4.86731 | overlap 3698884 TTAATCCCGTCGGAG TGGCGCGTTAC CTG GTAGCGCGCCA TTTTGTTTCCCCCGA TERM 4851 3699529 - 3699506 - g 70 -3.6 -4.60041 | overlap 3699507 3699508 ACCGACCCTGAAAAA GCGCTGCCGC CGCT GCTGGTGCGC CAGCAAAAAGCGGTC EcSMS35_3640 3698933 - 3701023 + | YccS/YhfK family integral membrane protein TERM 4852 3701065 - 3701038 - T 89 -14.2 -2.92792 | opp_overlap 3701037 3701036 3701055 3701057, overlap 3701035 ATGCAGGCTAAACCA TCGGATACAGCG TTCA CGCCGCATCCGA CATCTTTTGCCTGAT argD 3702309 - 3701086 - | acetylornithine/succinyldiaminopimelate aminotransferase pabA 3702958 - 3702395 - | aminodeoxychorismate synthase, component II fic 3703592 - 3702990 - | cell filamentation protein Fic TERM 4853 3703287 - 3703301 + g 75 -5.6 -4.70659 | overlap 3703289 CTCCAGATCCTGCAT CAGGGC ATT GCCCTC TTTTTCGATATAAGC TERM 4854 3703289 - 3703299 + g 74 -8.2 -3.96999 | overlap 3703287 CCAGATCCTGCATCA GGGC ATT GCCC TCTTTTTCGATATAA TERM 4855 3703844 - 3703823 - R 100 -17.3 -3.46602 | GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG ppiA 3704426 - 3703854 - | peptidyl-prolyl cis-trans isomerase A EcSMS35_3645 3704716 - 3704570 - | hypothetical protein TERM 4856 3704652 - 3704671 + gH 79 -2.1 -5.26119 | overlap 3704653 AAAATCGCCCGCTCG CGGCATA TCCCGC TATGCCA TTTTATTTTTGAACG TERM 4857 3704743 - 3704766 + GH 75 -8.8 -3.78934 | GGATTAGCTTTCTCT CCTACGCACT GACC GGTGCGTTGG TTATTGTCACCGGGA TERM 4858 3705290 - 3705280 - gH 81 -6.8 -4.59511 | overlap 3705270 3705284 AACATGCGCCAAAAA CGGA CGC TCCG GTAGCGAAAGAAAAA tsgA 3704697 - 3705878 + | major facilitator family transporter TsgA TERM 4859 3705886 - 3705913 + FH 84 -8.3 -4.43213 | overlap 3705885 3705887 CTCATTAATTGCTCA TGCCGGGCGGC ACTATC GTCGTCCGGCC TTTTCCTCTCTTACC TERM 4860 3705887 - 3705912 + FH 83 -11.8 -3.25205 | overlap 3705885 3705886 TCATTAATTGCTCAT GCCGGGCGGC ACTATC GTCGTCCGGC CTTTTCCTCTCTTAC TERM 4861 3707952 - 3707929 - g 70 -5.2 -4.3467 | gap 1, opp_overlap 3707929 3707940, overlap 3707915 ATCTCTACACCAAAA TCACC-GGCTC TCA GCGCCTGGCGA TGTTTGGCGCACAGA nirB 3706140 - 3708683 + | nitrite reductase [NAD(P)H], large subunit TERM 4862 3708891 - 3708906 + G 70 -6.1 -4.27316 | opp_overlap 3708902 TGTGGGTCGCCAGCC CGCTG AAAAAA CAGCG TTTTCGCTTAAGCGA TERM 4863 3708915 - 3708902 - g 71 -2.3 -5.00884 | opp_overlap 3708891 3708906 AGCCCGCTGAAAAAA CAGCG TTTT CGCTT AAGCGACGGCTTGTG nirD 3708680 - 3709006 + | nitrite reductase [NAD(P)H], small subunit TERM 4864 3709015 - 3709035 + F 95 -11.1 -4.68994 | overlap 3709016 CGGTTAATGTTTTAA CGGGAGGCA CAA TGCCTCCCC TTTTTGCATGGTCCT TERM 4865 3709016 - 3709034 + F 100 -14.6 -3.40674 | overlap 3709015 GGTTAATGTTTTAAC GGGAGGCA CAA TGCCTCCC CTTTTTGCATGGTCC TERM 4866 3709045 - 3709077 + F 79 -5 -5.16472 | gap 1, overlap 3709046 CTCCCCTTTTTGCAT GGTCCTGTAATA-AC CTTG GTATATTGCAGGACA TTTTTTAAACTTTTT TERM 4867 3709046 - 3709076 + F 72 -8.5 -3.67443 | gap 1, overlap 3709045 TCCCCTTTTTGCATG GTCCTGTAATA-AC CTTG GTATATTGCAGGAC ATTTTTTAAACTTTT TERM 4868 3709584 - 3709567 - g 74 -7.7 -4.07568 | opp_overlap 3709567 TCGCGCTGGCTAAAA CCACTGC ACCG GCAATGG TACTGTTCTTCAAAG nirC 3709131 - 3709937 + | nitrite transporter NirC TERM 4869 3710223 - 3710201 - g 81 -13.5 -2.7035 | overlap 3710198 3710216 TGCAGCGACAGATGA TGACGCGCT TAACC AGCGCGTCA GTGAAGCCGCTGAAG TERM 4870 3710736 - 3710751 + G 82 -9 -4.25104 | ATGAATCTGGTACGC CGCGAT GCTG ATCGCG TTTTCGTCGGCAAAC TERM 4871 3711221 - 3711185 - g 81 -9.3 -4.11484 | opp_overlap 3711197, overlap 3711190 GGCAATTGTCGAAAA CGGAACGGCAGTCACGC AGC GCGTGATTGACGGTACG CTCACGCAGCTGGGC TERM 4872 3711216 - 3711190 - g 76 -10.8 -3.36823 | opp_overlap 3711197, overlap 3711185 TTGTCGAAAACGGAA CGGCAGTCACGC AGC GCGTGATTGACG GTACGCTCACGCAGC cysG 3709956 - 3711329 + | siroheme synthase TERM 4873 3711339 - 3711356 + F 100 -11.3 -4.98531 | opp_overlap 3711338 CATTAATTTAACCAG GGCCAGA GAAT TCTGGCC TTTTTCGTTTACAAC EcSMS35_3651 3711580 - 3711747 + | putative lipoprotein TERM 4874 3711787 - 3711814 + T 100 -10.6 -5.28778 | gap 1, overlap 3711789 CTGATTTAATTGCCT GACGCCCTCGAGA TTT TC-CGAGGGCGTA TTTTTTCTCCATACT TERM 4875 3711789 - 3711812 + T 100 -13.2 -4.2748 | gap 1, overlap 3711787 GATTTAATTGCCTGA CGCCCTCGAGA TTT TC-CGAGGGCG TATTTTTTCTCCATA EcSMS35_3652 3712939 - 3711854 - | hypothetical protein TERM 4876 3712853 - 3712824 - G 73 -9.3 -3.66178 | gap 1, overlap 3712827 GGCGTTAAGCCTAAA TCACCGCCAGCAAG AAA CTCGCTGCCGG-GA AAATGGCGACAAATG TERM 4877 3712851 - 3712827 - G 78 -12.1 -2.94412 | overlap 3712824 GTTAAGCCTAAATCA CCGCCAGCAAG AAA CTCGCTGCCGG GAAAATGGCGACAAA EcSMS35_3653 3714255 - 3712951 - | hypothetical protein EcSMS35_3654 3714620 - 3714267 - | hypothetical protein EcSMS35_3655 3715509 - 3714631 - | phosphotriesterase family protein EcSMS35_3656 3716732 - 3715506 - | metalloenzyme domain-containing protein EcSMS35_3657 3717895 - 3716732 - | alanine racemase TERM 4878 3717860 - 3717874 + g 76 -9.2 -3.72984 | opp_overlap 3717859, overlap 3717872 TGCGGCGGAAATTAG CGCCGG GTT CTGGCG TTTCAATGCTTCTAC TERM 4879 3717919 - 3717933 + r 83 -2.9 -5.54264 | opp_overlap 3717928, overlap 3717923 3717928 CTCGTTTCTGTTCCT TGAAT TAAAT ATTCA TTTTTTTGAATATTT EcSMS35_3658 3718341 - 3717979 - | hypothetical protein EcSMS35_3659 3719263 - 3718358 - | hypothetical protein TERM 4880 3719217 - 3719236 + g 70 -4.2 -4.67552 | overlap 3719218 AACAAATAACGGGCC AGTGTCGT GATA ACGACGCC TTCTTTTTTGATAAA TERM 4881 3719389 - 3719402 + r 91 -9.5 -4.67904 | opp_overlap 3719389 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG TERM 4882 3719402 - 3719389 - R 100 -9.5 -5.67967 | opp_overlap 3719389 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG trpS 3720427 - 3719423 - | tryptophanyl-tRNA synthetase gph 3721178 - 3720420 - | phosphoglycolate phosphatase rpe 3721848 - 3721171 - | ribulose-phosphate 3-epimerase TERM 4883 3721853 - 3721865 + r 78 -6.3 -4.61482 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTTTCGCGGG dam 3722702 - 3721866 - | DNA adenine methylase TERM 4884 3722262 - 3722282 + g 79 -2.5 -5.24129 | AGCGAAGTGATACAA CTCTGCTTC CGG GAAATAGGG TTTTTTGTAGCGGCC TERM 4885 3722393 - 3722373 - G 82 -3.1 -5.19879 | overlap 3722375 3722378 GTTCAAATATAAAAA CAGTACCGC CCG ACGGAACGG ATCCTGGCTTTTGTT TERM 4886 3722586 - 3722565 - G 100 -13.1 -4.60073 | overlap 3722580 GATATAACGAGAAAA GTCGGTGTT GAGA AACACCGAC CCGGCACCTACAAAA TERM 4887 3722798 - 3722771 - R 81 -12 -3.05596 | opp_overlap 3722766 3722766 CAGCGCTTCAGGCAA CTCCCGCGATGA TAAA CCATTGCGGGAG ATAACCTTGATTACT damX 3724095 - 3722809 - | DamX protein TERM 4888 3724171 - 3724153 - R 78 -11 -3.15621 | opp_overlap 3724150, overlap 3724151 AACCTGAAGCTAATA GACCGCTT GAT AAGCGGCC TGACCTTTCTTGTTG aroB 3725275 - 3724187 - | 3-dehydroquinate synthase aroK 3726009 - 3725332 - | shikimate kinase TERM 4889 3725641 - 3725659 + g 72 -4.5 -4.64676 | AATACCCTGTTTCTC GGTCAAC TCATT GATGACC TTTTCTTCGCGATCG TERM 4890 3725917 - 3725891 - G 83 -10 -4.05446 | TTCGTTAATGATAAA CCCGCTTCGCTC AGA GAGCGCCGCAGG ACATGAACTGAAACC TERM 4891 3726112 - 3726096 - R 83 -6.5 -5.06451 | GATTAGCGTAAAAAA GACAGCA AAA TGCCGCC TGAATGATAAATCAT EcSMS35_3667 3727492 - 3726254 - | protein transporter HofQ TERM 4892 3726420 - 3726406 - GR 75 -5.6 -4.59773 | TTTTACGGGTAAAAA TGCCGC CCA GCGCCA ACGTTTCTCCGCTTT TERM 4893 3726994 - 3727008 + gr 71 -2.7 -4.84311 | overlap 3726995 3727004 CTACCCACTGTTCAA GGGCG CTTAA CGCCG TTTTGTTATCTCGCA EcSMS35_3668 3727808 - 3727404 - | hypothetical protein EcSMS35_3669 3727995 - 3727798 - | hypothetical protein TERM 4894 3727999 - 3727977 - GH 75 -8.4 -3.74872 | overlap 3727978 ATGGATGCCAGGAAA CCAGTTGCGC GCC GGGCAACTGA AAATCCAGTGGCGAA TERM 4895 3727998 - 3727978 - GH 70 -9.7 -2.84602 | overlap 3727977 TGGATGCCAGGAAAC CAGTTGCGC GCC GGGCAACTG AAAATCCAGTGGCGA EcSMS35_3670 3727981 - 3728100 + | hypothetical protein EcSMS35_3671 3728761 - 3728222 - | PilN family protein hofM 3729540 - 3728761 - | HofM protein TERM 4896 3729560 - 3729576 + H 82 -12.3 -2.92091 | ATGATCTCCTTATCA CCCGTCA CTC TGACGGG TATATCAATGCGTCT mrcA 3729636 - 3732212 + | penicillin-binding protein 1A TERM 4897 3732214 - 3732239 + T 77 -10.5 -3.44848 | opp_overlap 3732220, overlap 3732220 AGGAATTGTTCTGAT TAAAAAGGCGC TTCG GCGCCTTTTTC TGTTTGCTGACAAAG TERM 4898 3732233 - 3732220 - T 91 -9.5 -4.72272 | opp_overlap 3732214 3732220 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTTCTGTTTGCTG TERM 4899 3732220 - 3732233 + T 100 -9.5 -5.22289 | opp_overlap 3732220, overlap 3732214 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTTCTGTTTGCTG nudE 3732940 - 3732380 - | ADP compounds hydrolase NudE EcSMS35_3675 3733144 - 3733263 + | hypothetical protein EcSMS35_3676 3733260 - 3735395 + | hypothetical protein TERM 4900 3735437 - 3735396 - f 77 -9.5 -3.67775 | gap 1, opp_overlap 3735400, overlap 3735399 AGCCTTATCGAATAA CACGTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT-TG CTTCACTCTGGAGAT TERM 4901 3735435 - 3735399 - f 81 -12.3 -2.64872 | opp_overlap 3735400, overlap 3735396 CTTATCGAATAACAC GTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT TGCTTCACTCTGGAG TERM 4902 3735400 - 3735434 + F 100 -18 -3.39142 | opp_overlap 3735399 3735396 TTATCGAATAACACG TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA EcSMS35_3677 3735460 - 3736128 + | HAD family hydrolase TERM 4903 3736184 - 3736194 + G 75 -4.6 -4.82901 | CTGGATAAATGGCTA TGGG CTG CCCG TTTTTATAAAACCCG hslR 3736139 - 3736540 + | heat shock protein 15 TERM 4904 3736892 - 3736867 - g 93 -10.4 -4.44974 | opp_overlap 3736866 CGAAATTCCAGAAAA TGCCGACCTG AAAACG CTGGTCGGCA ATGGTTACGTGGTGA hslO 3736565 - 3737443 + | chaperonin HslO TERM 4905 3737452 - 3737475 + T 100 -16.8 -4.10161 | opp_overlap 3737447 3737463 TCATTAATGAGTATG TCCGGCAGAG AGGG CTCTGCCGGA TTTTACGACGTAATG EcSMS35_3680 3739301 - 3737577 - | hypothetical protein TERM 4906 3739167 - 3739155 - G 70 -5.5 -4.34771 | overlap 3739156 TAAAACGGATGAAAA CGCGA CGG TCGCA GGCACGCCATAAACA EcSMS35_3681 3739435 - 3739307 - | hypothetical protein TERM 4907 3739543 - 3739564 + H 76 -3 -5.26918 | overlap 3739544 CGATAATAGCAACCG TTTCGTGA CAGGAA TCACGGAG TTTTTTGTCAAATAT TERM 4908 3741273 - 3741254 - g 73 -11.4 -2.59797 | overlap 3741253 3741251 CTTTGATAAATACAC CGACACCC CTGC GGGTGCCG CGCTGGTAGCGGCAG pckA 3739680 - 3741302 + | phosphoenolpyruvate carboxykinase (ATP) TERM 4909 3741322 - 3741345 + F 100 -15.4 -5.75478 | CTGATATCTCATTGA CCCCTTATCC AAAC GGATAAGGGG TTTTTTTATCTAATT EcSMS35_3683 3741417 - 3741734 + | hypothetical protein EcSMS35_3684 3741793 - 3742089 + | hypothetical protein TERM 4910 3742088 - 3742119 + T 75 -8.8 -3.75845 | opp_overlap 3742093, overlap 3742093 AATTGAAAACAATCT AAAAACGGGAGG CACCTTCA CCTCCCGTTTTA TTTACCCTTCTTTTG TERM 4911 3742114 - 3742093 - T 91 -10.1 -4.85195 | opp_overlap 3742088 3742093 AAAACAATCTAAAAA CGGGAGGCA CCTT CACCTCCCG TTTTATTTACCCTTC TERM 4912 3742093 - 3742114 + T 91 -8.7 -4.90525 | opp_overlap 3742093, overlap 3742088 AAAACAATCTAAAAA CGGGAGG CACCTTCA CCTCCCG TTTTATTTACCCTTC envZ 3743473 - 3742121 - | osmolarity sensor protein EnvZ TERM 4913 3743418 - 3743386 - G 73 -12 -2.73443 | overlap 3743385 GCACCACCAGATAAG TCGTCACCAGGCTG ACGAA CAGCAAGGTGACGA TGAGCAATAACGTGC ompR 3744189 - 3743470 - | transcriptional regulatory protein OmpR TERM 4914 3743709 - 3743695 - G 77 -10 -3.62096 | opp_overlap 3743701 3743706, overlap 3743699 CTTCAGTACCGCAAA CTCACC GCT GGTGAG CGGCATCGGCTCATC greB 3744417 - 3744893 + | transcription elongation factor GreB TERM 4915 3746883 - 3746862 - g 84 -7.9 -4.62904 | gap 1, opp_overlap 3746861 3746860, overlap 3746863 AAAGAGCTGGAAAAA CCGGGTCGCG ATC CGCGTCC-GG AATTTAAAACCGCTC EcSMS35_3688 3744990 - 3747311 + | putative transcriptional accessory protein TERM 4916 3747412 - 3747391 - f 93 -10.9 -4.52589 | gap 1, opp_overlap 3747392 3747393, overlap 3747392 3747393 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGC-C TTTTTATTCCACAAG TERM 4917 3747392 - 3747412 + F 100 -11.1 -5.06414 | opp_overlap 3747391 3747392 3747393, overlap 3747393 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAG TERM 4918 3747412 - 3747392 - f 80 -11.1 -3.31232 | opp_overlap 3747392 3747393, overlap 3747391 3747393 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAG TERM 4919 3747411 - 3747393 - f 89 -14.6 -2.58418 | opp_overlap 3747392 3747393, overlap 3747391 3747392 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA TERM 4920 3747393 - 3747411 + F 100 -14.6 -3.63367 | opp_overlap 3747393 3747391 3747392, overlap 3747392 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA feoA 3747749 - 3747976 + | ferrous iron transport protein A TERM 4921 3748840 - 3748851 + G 74 -5.8 -4.53036 | TGCTCAACCGTTTCC TCGG TCTG CCGA TTTTCCTCTTTGTGA TERM 4922 3749006 - 3749029 + G 72 -11 -3.0263 | gap 1 CTGGCTGACTATCTT CC-TCGCCCAG GGC CTGGGCGGCGG TATTAACACCGTGCT TERM 4923 3749623 - 3749605 - g 77 -8.2 -4.11216 | overlap 3749618 CGCTGAGCGGGAAAA TCGTCGAT AAC ATCAACGA CTCGGCGCTGGCGTC feoB 3747993 - 3750314 + | ferrous iron transport protein B EcSMS35_3691 3750314 - 3750550 + | hypothetical protein TERM 4924 3750577 - 3750601 + F 100 -12.2 -5.08824 | gap 1, opp_overlap 3750577 CGCCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4925 3750601 - 3750577 - f 93 -12.2 -4.07568 | gap 1, opp_overlap 3750577 CGCCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 4926 3750780 - 3750764 - g 71 -2.9 -4.77036 | overlap 3750767 CGCCATGAGCAAAAA GCAGAGT TCC ACCCCAC ACGATGCGCTGTTCA EcSMS35_3692 3750753 - 3751631 + | hypothetical protein TERM 4927 3751619 - 3751645 + T 74 -10.8 -2.71712 | overlap 3751618 AGAAGAGTTGGCTGC GGCGAGTCAGTA AAG TTCTGTCTCGCC ATTTCAAAAGCCACC EcSMS35_3693 3752430 - 3751660 - | putative pimeloyl-BioC--CoA transferase BioH TERM 4928 3751733 - 3751720 - G 70 -5.2 -4.44046 | opp_overlap 3751720 CGGATGCGAAATAAA CGGC GCATGG GCCG CTTTGGCGAAGATGT TERM 4929 3752291 - 3752266 - G 72 -8.9 -3.75665 | TGACATCGCACCAAA TCCCCGGCTAC GCCC GAAGCCGGGCA GGTCAACAAGGTGCA gntX 3752468 - 3753151 + | protein GntX gntY 3753210 - 3753785 + | protein GntY gntT 3754146 - 3755462 + | high-affinity gluconate transporter TERM 4930 3755501 - 3755466 - T 74 -9.8 -3.32963 | gap 1, overlap 3755468 3755469 ATGGTGATTTGATAA CACTGACTGCCGGATGC ATC GCATCCGGCA-TCAACC GCACTCTACTTCTTC TERM 4931 3755499 - 3755468 - T 95 -14.6 -3.23393 | gap 1, overlap 3755466 3755469 GGTGATTTGATAACA CTGACTGCCGGATGC ATC GCATCCGGCA-TCAA CCGCACTCTACTTCT TERM 4932 3755498 - 3755469 - T 100 -15.9 -2.53822 | gap 1, overlap 3755468 3755466 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGGCA-TCA ACCGCACTCTACTTC malQ 3757591 - 3755507 - | 4-alpha-glucanotransferase TERM 4933 3755606 - 3755618 + g 74 -3.3 -4.93296 | AAGCGTTGCGGAGAG CTTGC GCC GCCAG TTTTTATACTGGTAA TERM 4934 3756544 - 3756530 - G 74 -10 -3.56092 | overlap 3756531 CCAGCAGGCGGCAAA CTGGCT GTA AGCCAG CCACTGCAACCAGAG TERM 4935 3757436 - 3757462 + g 85 -13.1 -3.18582 | gap 1, overlap 3757433 3757432 3757453 3757454 GACATTCGGGACTGG CGTTACCGCCAC TTTC GTGGCGGTA-CG TTGATGCATCGCGTC malP 3759994 - 3757601 - | maltodextrin phosphorylase TERM 4936 3758511 - 3758527 + g 70 -3.7 -4.62872 | TATTGCTGACGGAAT TTCGC ATCATCA GCGAA TTTTTCCAGATTGAT TERM 4937 3759178 - 3759194 + g 72 -5.1 -4.57073 | CACACTGGAAGTATT GCTGC ATCAGGC GCAGC TTTTTACCGGCAGTA TERM 4938 3760428 - 3760445 + H 70 -6.3 -4.20084 | gap 1, opp_overlap 3760420 3760419, overlap 3760428 3760430 GTACAACCCAGCATT C-ACGCTG GAT CAGCGTCG TTTTAGGTGAGTCAT TERM 4939 3760926 - 3760914 - g 75 -5.5 -4.60255 | overlap 3760915 ACAATGGCGCAAAAA CGGCA ATA TGCCA GCCTGACGTCACTCT malT 3760617 - 3763322 + | maltose regulon activator MalT rtcA 3764381 - 3763365 - | RNA 3'-terminal phosphate cyclase TERM 4940 3763606 - 3763617 + g 70 -7.2 -4.07568 | GCCGCGACCACCTCA GCGC TGAC GCGC TTTTCACCGACGACA rtcB 3765611 - 3764385 - | RtcB protein TERM 4941 3765514 - 3765501 - G 77 -5.9 -4.65263 | opp_overlap 3765499 3765501 ATGTTTGAAAATAAA CGGCA TCTT CGCCG TATTTATCAGTTGCT TERM 4942 3765675 - 3765687 + H 87 -4.9 -5.32565 | opp_overlap 3765675 GTGCCAGAAAATTAA TTAAG CAG CTTAA TTTTTTAATTCATTG TERM 4943 3766250 - 3766234 - g 71 -2.1 -5.02074 | overlap 3766237 3766240 CCACCGCGTAAAAAA GAACAGC CGC GCGGTGC AGGTGAAGTGACGAT TERM 4944 3767233 - 3767278 + G 75 -5.3 -4.70879 | gap 1 CTGGAACATGTTATA GCTATCTGCCGGCAG-GCAAAG TCG CTTTCCGCTGCCGGACGCCAGC TTTTTGACGTTTCGC rtcR 3765799 - 3767397 + | sigma-54 dependent transcriptional regulator RtcR glpR 3768137 - 3767379 - | glycerol-3-phosphate regulon repressor TERM 4945 3767891 - 3767903 + g 90 -6.9 -5.12068 | GCTCCGCCACTTTGC GGGCG ATG CGCTC TTTTTCTTCGGTCTG EcSMS35_3704 3768984 - 3768154 - | S54 family peptidase TERM 4946 3768838 - 3768797 - G 74 -10.1 -3.48276 | opp_overlap 3768786 3768797, overlap 3768798 3768824 CTGGCCGCCAGATAA CGCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGCC CGCACGCGTTCGGCC TERM 4947 3768837 - 3768798 - G 84 -13.6 -2.68823 | opp_overlap 3768786 3768797, overlap 3768797 3768824 TGGCCGCCAGATAAC GCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGC CCGCACGCGTTCGGC TERM 4948 3768844 - 3768824 - G 75 -6.7 -4.36914 | overlap 3768798 3768797 GGGTTTTCGAGAAAA CGCGCCAGC TCC GCCCGCACG CGTTCGGCCTGGGAC glpE 3769355 - 3769029 - | thiosulfate sulfurtransferase glpE TERM 4949 3769071 - 3769059 - G 71 -9.1 -3.53224 | CACCTCTGCGGGAAA CTGGC GCT GCCAG GCTTCAAAGCCGCCA TERM 4950 3769495 - 3769510 + H 70 -7.6 -3.95219 | opp_overlap 3769495 GATTCTTTGCTAATA TGTTCG ATAA CGAACA TTTATGAACTTTAAC TERM 4951 3770155 - 3770127 - g 81 -4.4 -5.04385 | overlap 3770129 3770132 GATACCGGCAAAAAA TACACCTGGCAG GCGCG CGGCCTGGTGAA CGCCACCGGCCCGTG TERM 4952 3770153 - 3770129 - g 70 -7 -4.14633 | overlap 3770127 3770132 TACCGGCAAAAAATA CACCTGGCAG GCGCG CGGCCTGGTG AACGCCACCGGCCCG glpD 3769545 - 3771050 + | glycerol-3-phosphate dehydrogenase EcSMS35_3708 3772860 - 3771868 - | hypothetical protein TERM 4953 3772294 - 3772311 + g 75 -5.5 -4.63172 | overlap 3772295 TTGGCTTCCAGAATC TTCTGGC CGCT GCCAGAC TTTTATACTTTCGTC EcSMS35_3709 3774391 - 3772886 - | hypothetical protein TERM 4954 3774142 - 3774118 - G 100 -2.7 -5.63103 | opp_overlap 3774122 3774124 CGGGAACTAAAAAAA GACATTGTCGC CAG GCGGCTATTTC TCTGTTTTCTGGTGC TERM 4955 3774479 - 3774506 + r 74 -4 -5.01732 | opp_overlap 3774484, overlap 3774484 TAAATAAAGGCGAAA AAAAACGGGACC TTTT GGCCCCGTTCTG TTTTTTAGCGAACTT TERM 4956 3774484 - 3774501 + r 80 -8.3 -4.18465 | opp_overlap 3774484, overlap 3774479 AAAGGCGAAAAAAAA CGGGACC TTTT GGCCCCG TTCTGTTTTTTAGCG TERM 4957 3774501 - 3774484 - R 100 -10.5 -5.82388 | opp_overlap 3774484 3774479 AAAGGCGAAAAAAAA CGGGACC TTTT GGCCCCG TTCTGTTTTTTAGCG glgP 3776967 - 3774520 - | glycogen phosphorylase TERM 4958 3776585 - 3776617 + g 72 -4.5 -4.72497 | overlap 3776586 3776588 AAGCAAGCCGCCAGA CGTCCCAGGCCACCG TTA CCGAGGCCCGGGTCA TTTTCTTCATCAATC glgA 3778419 - 3776986 - | starch synthase TERM 4959 3777653 - 3777665 + g 82 -7.7 -4.46212 | opp_overlap 3777646 AACAGTAAGTCCGTC TCTGG ACT CCAGA TTTTCTCGTCCACGC glgC 3779714 - 3778419 - | glucose-1-phosphate adenylyltransferase TERM 4960 3779223 - 3779237 + g 84 -7.8 -4.60487 | opp_overlap 3779223 3779222 TGGCATACAAGCAAC GGTGCA ACG TGCGCC TTTTTCGACGTGGTC glgX 3781705 - 3779732 - | glycogen debranching enzyme GlgX TERM 4961 3781291 - 3781250 - G 71 -10.7 -2.91395 | overlap 3781249 3781252 ATGGGCTTCATAAAT GATGGTGCTGCCCCACGGC GTGC GCGGCGGGGCATCATCCTC CCAGTCATAGTGATC TERM 4962 3781338 - 3781309 - G 70 -10 -3.2056 | opp_overlap 3781325 AGTCATAGTGATCAA CCACCACTACGC ATTTCG GCGCAATGGCGG CGTTGTCGCGATAGT glgB 3783888 - 3781702 - | 1,4-alpha-glucan branching enzyme TERM 4963 3782279 - 3782289 + g 83 -5.4 -5.0538 | overlap 3782260 3782257 TCGCCCGGCATCCGG TCGA GAA TCGA TTTTTTACCGTGGAC TERM 4964 3783165 - 3783183 + g 91 -7.4 -5.09173 | CATAAATAGAGATTG GCGCATCA AAC TGATTCGC TTTTTTGCGCTCTTC TERM 4965 3784142 - 3784125 - R 72 -9.8 -3.15996 | opp_overlap 3784123 3784122, overlap 3784123 TATTACGCACTAACA GGGGCG GCATCG CGCCCC AGATTTAATGAATAA asd 3785264 - 3784161 - | aspartate-semialdehyde dehydrogenase EcSMS35_3716 3785456 - 3786049 + | MarC family integral membrane protein TERM 4966 3786058 - 3786089 + T 79 -6.6 -4.67982 | opp_overlap 3786058, overlap 3786053 GGGGTAAGGTTCAAA CAGGTGCTGC ACACAACCAGAC GCGGCACCTG TTTTATTACCTGAAC EcSMS35_3717 3787297 - 3786095 - | putative DNA protecting protein DprA EcSMS35_3718 3789393 - 3787297 - | ATP-dependent DNA helicase RecQ TERM 4967 3789523 - 3789492 - R 84 -8.8 -4.31766 | opp_overlap 3789496, overlap 3789496 AGGAGATAAGAGAAA TGAATTACTGCGAG CAAG CTCGCAGTAATTTG TCGCAGTAATTAACT TERM 4968 3789496 - 3789519 + r 100 -14 -3.88559 | opp_overlap 3789492 3789496 GATAAGAGAAATGAA TTACTGCGAG CAAG CTCGCAGTAA TTTGTCGCAGTAATT TERM 4969 3789519 - 3789496 - R 100 -14 -3.70947 | opp_overlap 3789496, overlap 3789492 GATAAGAGAAATGAA TTACTGCGAG CAAG CTCGCAGTAA TTTGTCGCAGTAATT gntU 3790873 - 3789533 - | gluconate transporter GntU TERM 4970 3790848 - 3790820 - G 73 -3.9 -4.77036 | overlap 3790822 3790823 CTTCATGACTAAAAA CAGCAGCAG TAAAACAGACC CTACTGCTG TTAAAACAAGCGTTA gntK 3791425 - 3790877 - | thermoresistant gluconokinase TERM 4971 3791462 - 3791436 - R 77 -5.2 -5.01845 | opp_overlap 3791436 TACAAGAATTAAAAA TGTTACGGGTAA CTG TTATCGGTAACA TTGTCCAGCCGGACA gntR 3792538 - 3791543 - | transcriptional regulator GntR TERM 4972 3792267 - 3792279 + g 76 -9.1 -3.75629 | opp_overlap 3792262 GTCTGATAACCGTGC GCGTC GGT GACGC TTTCGATTCCGCGTA TERM 4973 3792712 - 3792681 - g 100 -20.2 -4.10429 | AACGACGCGGCAAAA CCCCGGTCGCGTAC ATCA GCACGCGACCGGAG CGAGCGAGGAAGCCT EcSMS35_3723 3792616 - 3792765 + | hypothetical protein EcSMS35_3722 3793457 - 3792762 - | pirin family protein TERM 4974 3793074 - 3793086 + g 81 -6.9 -4.63932 | opp_overlap 3793060 3793073 ACGCTGTTCATAACG CGGCG TAA TGCCG TTTTCTTCAGGCATG EcSMS35_3724 3794617 - 3793580 - | oxidoreductase, NAD-binding TERM 4975 3794760 - 3794744 - H 100 -9.4 -6.10489 | AAGGTCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAATACTGGAA EcSMS35_3725 3794951 - 3795439 + | acetyltransferase TERM 4976 3795463 - 3795497 + T 74 -10 -3.13403 | opp_overlap 3795469, overlap 3795461 CAATCTACGTTTGTC ATTTAAGCCCTCACCT ACC GGGAGAGGGCTTAAGA TATTAATACCCCGCA TERM 4977 3795491 - 3795469 - T 73 -10.5 -3.05463 | opp_overlap 3795463 3795461 ACGTTTGTCATTTAA GCCCTCACC TACCG GGAGAGGGC TTAAGATATTAATAC ggt 3797245 - 3795500 - | gamma-glutamyltransferase TERM 4978 3797219 - 3797236 + g 90 -9.1 -4.51699 | opp_overlap 3797203 AGCAGCAATGGCCAC CCGGCGT AAAA ACGTCGG TTTTATCATCGTTAT TERM 4979 3797387 - 3797400 + G 72 -8.1 -3.95219 | overlap 3797397 GACTTCTGATTCTAA CGGCA CTCC TGCCG TTTGTCGGCTTTGCA EcSMS35_3728 3797365 - 3797805 + | hypothetical protein EcSMS35_3727 3798535 - 3797792 - | glycerophosphoryl diester phosphodiesterase TERM 4980 3797853 - 3797884 + g 95 -12.2 -4.17556 | gap 1, opp_overlap 3797851 3797847 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GCCGC-GCGCTGGGG TTTATTGACGGTATA ugpC 3799602 - 3798532 - | sn-glycerol-3-phosphate transport ATP-binding protein EcSMS35_3730 3800449 - 3799604 - | sn-glycerol 3-phosphate transport protein ugpA 3801333 - 3800446 - | sn-glycerol-3-phosphate transport system permease protein UgpA ugpB 3802747 - 3801431 - | glycerol-3-phosphate-binding periplasmic protein precursor TERM 4981 3802775 - 3802788 + r 71 -5.2 -4.46212 | opp_overlap 3802773 3802785, overlap 3802774 TTGTTGTACCGAATG CGCG AATTCA CGCG TTTTATGCTCGCGGG TERM 4982 3802977 - 3802953 - R 83 -10.8 -3.70331 | overlap 3802951 AATGCACTGAAAAGA GGCGATTAAC GGCCA GCTAATCGCC AGAACTCCTTACCAT EcSMS35_3733 3803110 - 3802958 - | hypothetical protein TERM 4983 3803037 - 3803005 - G 80 -5.6 -4.89233 | gap 1, overlap 3802998 3802996 3803006 CATGAAGAGCAAAAA TGGCAGCAAATTCTG CGTC CAGT-TTTGCTGCCC GATGAGAGCTACATT TERM 4984 3803036 - 3803006 - G 71 -9.1 -3.52455 | gap 1, overlap 3802998 3802996 3803005 ATGAAGAGCAAAAAT GGCAGCAAATTCTG CGTC CAGT-TTTGCTGCC CGATGAGAGCTACAT EcSMS35_3734 3803853 - 3803107 - | hypothetical protein TERM 4985 3803324 - 3803337 + gH 79 -2.3 -5.18726 | ACCTCAAACTCGCTT TCCGC ATCA GCGTA TTTTTCTTGTGCGGC TERM 4986 3803935 - 3803963 + Gr 100 -14.7 -3.32769 | opp_overlap 3803935 3803938, overlap 3803938 CTGTATACGGACGAA TAACCCGGCAG AACTTAG CTGCCGGGTTA TTGATAATTTACCCG TERM 4987 3803963 - 3803935 - gR 95 -14.7 -3.20382 | opp_overlap 3803935 3803938, overlap 3803938 CTGTATACGGACGAA TAACCCGGCAG AACTTAG CTGCCGGGTTA TTGATAATTTACCCG TERM 4988 3803938 - 3803960 + Gr 93 -12 -3.79909 | opp_overlap 3803935 3803938, overlap 3803935 TATACGGACGAATAA CCCGGCAG AACTTAG CTGCCGGG TTATTGATAATTTAC TERM 4989 3803960 - 3803938 - gR 93 -12 -3.74361 | opp_overlap 3803938 3803935, overlap 3803935 TATACGGACGAATAA CCCGGCAG AACTTAG CTGCCGGG TTATTGATAATTTAC EcSMS35_3736 3803852 - 3803983 + | hypothetical protein livF 3804685 - 3803972 - | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF TERM 4990 3804238 - 3804216 - G 70 -4.7 -4.51994 | TCAAGCAACAACAAA CGCGGGTTG CTCAT CAGCGCGCG CCCAATCGCCAGCAT livG 3805454 - 3804687 - | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivG TERM 4991 3804964 - 3804935 - G 72 -6.3 -4.30576 | CGTCGAGCATTAAAA TCTCCGGCTGCGT CACC ATGCAGCGGGCGA TCTCCAGACGACGCT livM 3806728 - 3805451 - | high-affinity branched-chain amino acid ABC transporter, permease protein LivM livH 3807651 - 3806725 - | high-affinity branched-chain amino acid transport system permease protein livH TERM 4992 3807532 - 3807516 - G 79 -10.1 -3.71527 | opp_overlap 3807516 TGCCAATCATGTAAA CCTCGCC GTG GGCGAAG TTGATCATGCCGATA TERM 4993 3807690 - 3807670 - R 71 -10.4 -2.73159 | overlap 3807669 GTAACCTTTCTAAAC CCGCCCGT TTTTC ACGGGCAG TGGGATGATCACTTG livK 3808808 - 3807699 - | high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK TERM 4994 3807944 - 3807966 + g 78 -10.6 -3.56092 | CTTTCTTGTCTGCTT TCAGCGCATC AAC GATGCCCTGA TTTGCCGGATCCTGG EcSMS35_3741 3809097 - 3808960 - | hypothetical protein TERM 4995 3809176 - 3809166 - H 100 -3.2 -5.88476 | AAAAGAAATAAAAAA GAGA AAG CCTC CGATTAAATTATTTC EcSMS35_3742 3809232 - 3809615 + | acetyltransferase TERM 4996 3809776 - 3809794 + T 70 -10.3 -2.5785 | opp_overlap 3809767 3809771, overlap 3809775 ATATTAGCAATTTGG CGGCAAC CCAAA GTTGCCG ATTAATGATTACTTC livJ 3810906 - 3809803 - | high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein LivJ TERM 4997 3810634 - 3810645 + g 70 -5.8 -4.15044 | CACATATTTAATGCC GTCG TTAA CGAC TTTGTTCGCCACCGC TERM 4998 3811156 - 3811137 - R 100 -7.8 -5.75538 | opp_overlap 3811137 CCCAAAAAACAAAAA CCCCGGAC TCTC ATCCAGGG TTCTCTGCTTAATAG rpoH 3812032 - 3811178 - | alternative sigma factor RpoH TERM 4999 3812115 - 3812136 + r 79 -8.1 -4.37658 | CAACGAGGTTATCAT TCACTGTTT TATC AGACAGTGA TTTTATCCACAAGTT ftsX 3813335 - 3812277 - | cell division protein FtsX TERM 5000 3812961 - 3812983 + g 77 -3.3 -5.03314 | gap 1 CTGTGCCACCACGCC CGCAGCGGCG TCAT CGTC-CAGCG TTTTTTGCAGATAAA ftsE 3813996 - 3813328 - | cell division ATP-binding protein FtsE ftsY 3815537 - 3813999 - | cell division protein FtsY TERM 5001 3814421 - 3814411 - G 72 -8.2 -3.83921 | opp_overlap 3814406 TCGAAGATAACAGAA GCGG AAT CCGC ACCGGTATGCTGGGC TERM 5002 3815709 - 3815696 - g 87 -4.5 -5.1861 | TTTATCATGAAAAAA CCGAA TCAT TCCGG CAGCGGCCAAATCCG rsmD 3815687 - 3816283 + | 16S rRNA methyltransferase RsmD TERM 5003 3816464 - 3816495 + G 80 -11.7 -3.39018 | opp_overlap 3816460, overlap 3816461 CCCGCAGATGACCAC CGCCGAAAAGG TGCGGATTTT CCTTTTCGGCG TGTTTGAACTGCTGG EcSMS35_3749 3816273 - 3816542 + | hypothetical protein EcSMS35_3750 3816904 - 3816545 - | hypothetical protein TERM 5004 3817276 - 3817290 + G 71 -3.4 -4.8048 | overlap 3817277 3817278 CGTCAACGTCTGATG TACGCC ATC GGCGCG TTTTTCCTCTCGCAC EcSMS35_3751 3817045 - 3817671 + | hypothetical protein TERM 5005 3817682 - 3817701 + F 81 -12.2 -3.01984 | opp_overlap 3817678 3817677 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA TERM 5006 3818478 - 3818457 - g 79 -10.1 -3.71649 | overlap 3818450 CGCTGAAACCGGAAA CCGCCACGC GTCT GCGTAACGG TGAGCGTGAAGAGGT zntA 3817745 - 3819943 + | heavy-metal transporting ATPase ZntA TERM 5007 3819951 - 3819975 + T 100 -18.7 -3.21099 | opp_overlap 3819947 3819948 3819946 GGAAGTAAAAGTGTT GCCTGATAGCC TCT GGCTATCAGGC TTAGTGCTGAGGCGG EcSMS35_3753 3820284 - 3819976 - | hypothetical protein TERM 5008 3820390 - 3820372 - R 81 -11 -3.4252 | overlap 3820326 TCGTAGGCATGATAA GACGCGAC AGC GTCGCATC AGGCATTGCGCACCG tusA 3820744 - 3820499 - | sulfurtransferase TusA TERM 5009 3821417 - 3821435 + G 70 -6.6 -4.0342 | overlap 3821418 CACCCTGTTTGGTAA CGTCAGCG ACA CGCTGGCC TTCTTCTTCATTGCC EcSMS35_3755 3820965 - 3821630 + | hypothetical protein EcSMS35_3756 3821703 - 3822260 + | putative lipoprotein TERM 5010 3822278 - 3822305 + T 100 -9.1 -5.52384 | opp_overlap 3822273 3822278, overlap 3822279 TTTAAGATGATGAGA TGGCCTCAGGT ACTTCC ACCGGAGGCCG TTTTTTTAATCGCCA TERM 5011 3822279 - 3822304 + T 82 -10.4 -3.90707 | opp_overlap 3822273 3822278, overlap 3822278 TTAAGATGATGAGAT GGCCTCAGGT ACTTCC ACCGGAGGCC GTTTTTTTAATCGCC EcSMS35_3757 3823514 - 3822264 - | major facilitator transporter TERM 5012 3824024 - 3824010 - g 77 -2.8 -5.03314 | opp_overlap 3824023 TGGACTCGGAAAAAA TGGTTA CCT TCACCA CGGCGCTAATGACCG EcSMS35_3758 3823613 - 3824662 + | hypothetical protein TERM 5013 3824942 - 3824910 - g 82 -11.3 -3.53224 | opp_overlap 3824900, overlap 3824931 CATTCGCGCCGGAAA CGCCGCTATGGTTCA ACT TAAGCCATAGCGGTG ACGATATCGCCCTGC acpT 3824717 - 3825304 + | 4'-phosphopantetheinyl transferase acpT TERM 5014 3825350 - 3825377 + F 70 -7.1 -3.91984 | opp_overlap 3825342 3825340 CAGAACAGGTAATCA GTATGACGAAT ACTTAA AATCGTCATAC TTATTTCCGCCATCT nikA 3825415 - 3826989 + | nickel ABC transporter, periplasmic nickel-binding protein NikA TERM 5015 3827035 - 3827055 + G 90 -7.5 -4.93296 | overlap 3827038 TGCTGATCCCGATGG TGCTCGCCG CCT CGGTGATCA TTTTTCTGATGCTGC TERM 5016 3827526 - 3827539 + G 70 -4.5 -4.55287 | CACATCATTTTGCCT GCGGT TTCC ATCGC TTTTATGTCGCTGGC nikB 3826989 - 3827933 + | nickel ABC transporter, permease protein NikB nikC 3827930 - 3828763 + | nickel ABC transporter, permease protein NikC nikD 3828763 - 3829527 + | nickel ABC transporter, ATP-binding protein NikD nikE 3829524 - 3830330 + | nickel ABC transporter, ATP-binding protein NikE nikR 3830336 - 3830737 + | nickel-responsive transcriptional regulator NikR EcSMS35_3766 3830936 - 3831682 + | GntR family transcriptional regulator EcSMS35_3767 3831707 - 3832180 + | PEP-dependent sugar transporting PTS family, IIA component EcSMS35_3768 3832177 - 3832458 + | PEP-dependent sugar transporting PTS family, IIB component EcSMS35_3769 3832532 - 3833890 + | PEP-dependent sugar transporting PTS family, IIC component EcSMS35_3770 3833883 - 3835391 + | carbohydrate kinase EcSMS35_3771 3835381 - 3835650 + | HPr family phosphocarrier protein EcSMS35_3772 3835682 - 3836542 + | fructose-bisphosphate aldolase, class II TERM 5017 3836553 - 3836591 + T 74 -9.6 -3.39595 | opp_overlap 3836545 3836555, overlap 3836554 3836557 CTTAAGAGCCACAAA AATATAGCGGCGCAACAG AAA TTGTTGGGCCGCTATAAG TTATAAATGATTCAA TERM 5018 3836554 - 3836590 + T 84 -13.1 -2.63435 | opp_overlap 3836545 3836555, overlap 3836553 3836557 TTAAGAGCCACAAAA ATATAGCGGCGCAACAG AAA TTGTTGGGCCGCTATAA GTTATAAATGATTCA TERM 5019 3836589 - 3836555 - T 100 -15.9 -4.91459 | opp_overlap 3836554 3836553 3836557, overlap 3836545 TAAGAGCCACAAAAA TATAGCGGCGCAACA GAAAT TGTTGGGCCGCTATA AGTTATAAATGATTC TERM 5020 3836557 - 3836587 + T 89 -14.8 -2.60808 | opp_overlap 3836545 3836555, overlap 3836554 3836553 AGAGCCACAAAAATA TAGCGGCGCAACAG AAA TTGTTGGGCCGCTA TAAGTTATAAATGAT EcSMS35_3773 3836924 - 3836592 - | HicB family protein EcSMS35_3774 3838419 - 3837295 - | ABC transporter, ATP-binding protein TERM 5021 3837639 - 3837623 - G 70 -10.1 -3.24232 | overlap 3837621 3837619 GTGGTGGCAAACAGA CTGAGCG CCA CGCCCAG CATAAACAGCGGGAT EcSMS35_3775 3841154 - 3838419 - | ABC transporter, ATP binding protein TERM 5022 3839931 - 3839909 - G 85 -11.3 -3.65351 | gap 1, overlap 3839891 3839888 CCACCGCCAGCGAAA GCCGCT-GGC GAAT GCCGAGCGGC AATGACTCCGGCAGA TERM 5023 3840842 - 3840823 - G 71 -2.1 -5.00884 | AGGCGGGCGAAAAAA TCGACGT TTTCAT ACACCGA CAAGGTGTGGTAGAG EcSMS35_3776 3842218 - 3841151 - | MFP family transporter TERM 5024 3841222 - 3841233 + g 72 -7.2 -4.1964 | GCACCCACGCTACGC CCGG CAAA CCGG TTTTGACATATTCCA TERM 5025 3842267 - 3842287 + r 74 -11.1 -2.80344 | opp_overlap 3842265 3842264, overlap 3842266 CGCGTGTTACAACTG CCGCCGAAC GAC GTTCAGCGG ATTCTTCCATCCGGG EcSMS35_3777 3842394 - 3842281 - | hypothetical protein EcSMS35_3778 3844206 - 3842584 - | hypothetical protein TERM 5026 3843344 - 3843357 + g 70 -5.9 -4.258 | CCCAGAAACGTACAT GGCGT CACT GCGCC TTTATTAATAACTAA TERM 5027 3844404 - 3844368 - R 77 -9.6 -3.60074 | opp_overlap 3844370 GAGAAAGTCCCTAAA GATTGTAGAGGCGT CATCAGTAC ATGCCTCTACAATC GATTAAGAAAAACTA EcSMS35_3779 3846120 - 3844468 - | hypothetical protein TERM 5028 3845600 - 3845582 - G 70 -4.6 -4.57787 | AGAAGAGTAAAGAAA TTTCTCTC TAT GATAGAAA ACCCATCAACTTTAT EcSMS35_3780 3846440 - 3847492 + | hypothetical protein TERM 5029 3847513 - 3847540 + T 75 -4.9 -4.8667 | opp_overlap 3847513 ACGTACCGGATAAAA CCAGCGTTG ATTATTTGCG TAACGCTGG TTTTTCTGAGGTATC TERM 5030 3847600 - 3847615 + T 74 -3.2 -5.04987 | opp_overlap 3847601, overlap 3847601 GTTAAGTATAAATAA ACAGCA AAGT TGCTGA TTTTTTCAACCTGTT TERM 5031 3847614 - 3847601 - T 79 -6.7 -4.62622 | opp_overlap 3847601 3847600 TTAAGTATAAATAAA CAGCA AAGT TGCTG ATTTTTTCAACCTGT TERM 5032 3847677 - 3847704 + T 71 -7.8 -3.75153 | gap 1 GTTTTAATCACCTTT CCCTCCA-CCTTA TAT TAAGCATGGAGGG TTTCAGTTCACAGGC EcSMS35_3781 3849009 - 3847807 - | pyridine nucleotide-disulfide oxidoreductase family protein TERM 5033 3849860 - 3849841 - g 70 -4.2 -4.65933 | overlap 3849837 GAGCGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 3849241 - 3850740 + | low-affinity inorganic phosphate transporter 1 TERM 5034 3850782 - 3850757 - T 70 -8.9 -3.16647 | opp_overlap 3850759, overlap 3850756 3850759 CGTACGCACCAAAAC GAGCGGGTCAG TTTA CTGGCCCGCTT TTTTTATGCGTCATT TERM 5035 3850759 - 3850780 + T 100 -13.7 -5.64274 | opp_overlap 3850757 3850756 3850759 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTCA TERM 5036 3850780 - 3850759 - T 81 -11.5 -3.14218 | opp_overlap 3850759, overlap 3850757 3850756 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTCA uspB 3851092 - 3850811 - | universal stress protein B uspA 3851537 - 3851971 + | universal stress protein A TERM 5037 3851998 - 3852015 + F 100 -14.1 -4.77757 | CGACGTGTTCCTGAA CGCCCGC ATAT GCGGGCG TTTTGCTTTTTGGCG TERM 5038 3852370 - 3852401 + G 71 -2.9 -4.78572 | overlap 3852398 GTTATGGGAGCGATT CGGCTACTACGGC GTGCAG GGCGTACTGGCTG TTTTCTTCGTTAAGC TERM 5039 3853353 - 3853363 + G 70 -4.6 -4.58395 | TCGGAATGTTTATGT GCTC GCT GGGC TTTTTGACGGCTGCA EcSMS35_3785 3852287 - 3853756 + | amino acid/peptide transporter TERM 5040 3853772 - 3853797 + T 100 -19.1 -4.19735 | opp_overlap 3853772 TTATTCTTGCAGAAA GCAGGGTAGCG ATAA CGCTACCCTGC TTTACTTTTACACCG TERM 5041 3853797 - 3853772 - T 100 -19.1 -3.86346 | opp_overlap 3853772 TTATTCTTGCAGAAA GCAGGGTAGCG ATAA CGCTACCCTGC TTTACTTTTACACCG EcSMS35_3786 3854557 - 3853805 - | hypothetical protein TERM 5042 3854511 - 3854532 + g 79 -10.1 -3.794 | opp_overlap 3854513, overlap 3854513 GCCGCCAGAACAGAT AAGGCACCG TCTC CGGTGCCTG TTTCATCAATTAAGC TERM 5043 3854513 - 3854530 + g 86 -12.7 -3.48105 | opp_overlap 3854513, overlap 3854511 CGCCAGAACAGATAA GGCACCG TCTC CGGTGCC TGTTTCATCAATTAA TERM 5044 3854530 - 3854513 - G 91 -12.7 -3.72788 | opp_overlap 3854513 3854511 CGCCAGAACAGATAA GGCACCG TCTC CGGTGCC TGTTTCATCAATTAA prlC 3856607 - 3854565 - | oligopeptidase A TERM 5045 3854649 - 3854671 + g 74 -10.6 -3.21276 | opp_overlap 3854638, overlap 3854648 CAGATCCATCGGCTC TTCTGAACCG CCA CGGCTCAGAA TGTTGTCGAGGAACG TERM 5046 3855728 - 3855738 + g 70 -4.6 -4.46581 | opp_overlap 3855722, overlap 3855722 TTAAGAAATCCAGCA CCTG CTG CGGG TTTTCTGCCATTTTA TERM 5047 3856210 - 3856223 + g 79 -2.3 -5.24531 | overlap 3856202 TCGAAGTCGCGCAGT GCGTT ATCA ACCGC TTTTTTCTGCGCCGT TERM 5048 3856763 - 3856782 + H 75 -4.8 -4.8622 | overlap 3856764 CTGATAGGCTTTTGT GCGCCCCG AATA CGGGCCGA TTTTTACTTACCGGA TERM 5049 3856764 - 3856781 + H 71 -8.3 -3.5125 | overlap 3856763 TGATAGGCTTTTGTG CGCCCCG AATA CGGGCCG ATTTTTACTTACCGG TERM 5050 3857251 - 3857233 - g 77 -6.6 -4.56597 | GCGCGCGTCGAAAAA GCCGATGG TTT CCAGCAGC TTAAGGCCAAACTGC TERM 5051 3857335 - 3857321 - g 75 -5.6 -4.58773 | CGTATGAAATGAAAA CCGACT ATC AGGCGG TGGTCAGCGGGATAG yhiR 3856810 - 3857652 + | DNA utilization protein YhiR gor 3857724 - 3859076 + | glutathione-disulfide reductase TERM 5052 3859085 - 3859111 + TF 100 -16 -3.11732 | opp_overlap 3859085, overlap 3859078 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAGCTACGTTTCCG TERM 5053 3859111 - 3859085 - Tf 100 -13.8 -3.71649 | opp_overlap 3859078 3859085 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAGCTACGTTTCCG EcSMS35_3790 3859246 - 3859127 - | hypothetical protein EcSMS35_3791 3859241 - 3859414 + | hypothetical protein TERM 5054 3859571 - 3859540 - TR 75 -9.7 -3.54543 | gap 1, opp_overlap 3859548, overlap 3859548 ACTCAGGGCTGGAAA GTAAAAAA-CCGAC GCAAA GTCGGTTTTTTTAC ATCCGGATTCGGACA TERM 5055 3859548 - 3859562 + Tr 100 -7.1 -5.47218 | opp_overlap 3859540 3859548 CTGGAAAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACATCCGG TERM 5056 3859562 - 3859548 - TR 95 -7.1 -5.37593 | opp_overlap 3859548, overlap 3859540 CTGGAAAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACATCCGG EcSMS35_3792 3859851 - 3859738 - | hypothetical protein TERM 5057 3859774 - 3859802 + g 82 -13.4 -2.86164 | opp_overlap 3859732 3859773 3859781, overlap 3859781 ACTCAGGCTGAAGAG TAAAAAACCGAC GCAAA GTCGGTTTTTTA TGTCCTGATTCAGAC TERM 5058 3859781 - 3859795 + g 95 -7.1 -5.39721 | opp_overlap 3859781 3859773, overlap 3859774 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTATGTCCTGA TERM 5059 3859795 - 3859781 - G 95 -7.1 -5.27779 | opp_overlap 3859774 3859781, overlap 3859773 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTATGTCCTGA arsR 3859954 - 3860307 + | arsenical resistance operon repressor TERM 5060 3860568 - 3860583 + G 90 -6.8 -5.08824 | TATCATCAGCTTGCT GCTGGA TGAG TCCGGC TTTTTTGAATGGGCG arsB 3860362 - 3861651 + | arsenical pump membrane protein arsC 3861664 - 3862089 + | arsenate reductase (glutaredoxin) TERM 5061 3862092 - 3862112 + T 77 -6.8 -4.48713 | opp_overlap 3862095, overlap 3862095 ACGCCTGAAATAGCT AAAGGGGG ATATG CCCCCTTA TTTGTTCTTCGTGGC TERM 5062 3862109 - 3862095 - T 75 -8.5 -3.81137 | opp_overlap 3862092 3862095 CCTGAAATAGCTAAA GGGGG ATATG CCCCC TTATTTGTTCTTCGT TERM 5063 3862095 - 3862109 + T 84 -8.5 -4.34486 | opp_overlap 3862095, overlap 3862092 CCTGAAATAGCTAAA GGGGG ATATG CCCCC TTATTTGTTCTTCGT EcSMS35_3796 3862430 - 3862110 - | ArsR family transcriptional regulator EcSMS35_3797 3862537 - 3863538 + | putative permease TERM 5064 3863733 - 3863705 - f 74 -11.1 -2.76442 | opp_overlap 3863703 3863705 3863714, overlap 3863702 ATCACCACGCAATCA TGCTTCTCTGACA TTT TATCGGAGAAGCA ATGTCTCTTTGTCTC TERM 5065 3863705 - 3863733 + F 74 -11.1 -2.5459 | opp_overlap 3863705 3863702, overlap 3863703 3863714 ATCACCACGCAATCA TGCTTCTCTGACA TTT TATCGGAGAAGCA ATGTCTCTTTGTCTC TERM 5066 3864803 - 3864813 + G 78 -5.4 -4.87133 | overlap 3864791 CCGGGTTCGTTCTAA CCTT GTC AAGG TTTTATTTCGAAGAT EcSMS35_3798 3864118 - 3865341 + | hypothetical protein TERM 5067 3866070 - 3866104 + G 74 -10.6 -3.14132 | TGGGATTACGGCTAT GGTGCATTCTGGCCGG AAC CGGGCTGGGGTGCGCC TTACTACACCAACGC EcSMS35_3799 3865431 - 3866153 + | Slp family outer membrane lipoprotein TERM 5068 3866164 - 3866194 + F 81 -12.7 -2.55015 | opp_overlap 3866165, overlap 3866160 AATAACACCACCGAA AGATGCAGATGCT TTCTC AGCATCTGCATCA TGCATTACATCAAAT TERM 5069 3866193 - 3866165 - f 100 -16.2 -3.72009 | opp_overlap 3866164 3866160 ATAACACCACCGAAA GATGCAGATGCT TTCTC AGCATCTGCATC ATGCATTACATCAAA dctR 3866306 - 3866836 + | transcriptional regulator DctR TERM 5070 3866882 - 3866855 - T 70 -6.2 -4.24075 | ATTGATTAATATAAA GAGGCCCAGCAA TAAA TAGCCAGACCTC CCGTTAATTATACGT hmuS 3867925 - 3866897 - | hemin transport protein HmuS TERM 5071 3867571 - 3867581 + g 86 -6.8 -4.97158 | opp_overlap 3867558, overlap 3867574 TACTCTGGCGTTCGC CACG AGC CGTG TTTTCTTTGATGTGG TERM 5072 3867968 - 3867949 - R 100 -13.6 -4.03234 | opp_overlap 3867947 TTCCTTCCAGATAAA TGCCCCGA AATA TCGGGGCA GATGATTACCATTGA chuA 3869956 - 3867974 - | outer membrane heme/hemoglobin receptor ChuA EcSMS35_3803 3870325 - 3870486 + | hypothetical protein EcSMS35_3804 3870640 - 3871554 + | periplasmic-binding protein TERM 5073 3872206 - 3872192 - g 71 -9.2 -3.54935 | opp_overlap 3872194 3872197 3872205 GAAAGCCTGGTTAAA CGCGAC CGT GCCGCG GTGGTCTGTGACCTG EcSMS35_3805 3871574 - 3872911 + | putative coproporphyrinogen III oxidase EcSMS35_3806 3872924 - 3873418 + | hypothetical protein TERM 5074 3873744 - 3873759 + G 75 -4.6 -4.82901 | GACCTCTTTGGGATG CGGCGA TAGC TGGCCG TTTTTATCAGAGCGG TERM 5075 3873824 - 3873844 + G 71 -9 -3.45832 | opp_overlap 3873813 3873824 AAACGCTGGCGGAAA GCTGGTTG CAAAC CAGCCAGC TTGATTATGCCATTC TERM 5076 3873840 - 3873824 - g 78 -10.9 -3.5394 | opp_overlap 3873824, overlap 3873813 AAACGCTGGCGGAAA GCTGGTT GCA AACCAGC CAGCTTGATTATGCC EcSMS35_3807 3873418 - 3874041 + | hypothetical protein TERM 5077 3874047 - 3874067 + F 93 -15.4 -2.66316 | opp_overlap 3874033 3874034, overlap 3874044 3874044 ACCGGCGTGATCCCC CGGCGCGG TATGT CCGCGCCG TAATGTCGTAACGGA EcSMS35_3808 3874090 - 3875082 + | iron chelate ABC transporter permease hmuV 3875049 - 3875849 + | hemin import ATP-binding protein HmuV TERM 5078 3875883 - 3875852 - T 79 -8.1 -4.30576 | gap 1, overlap 3875856 CCTCGATCATTAAAA CCAACAGGAGTACC GCACT GGTACTCCTGC-GA ATAAATAACTATACA TERM 5079 3875880 - 3875856 - T 100 -14.4 -3.72743 | overlap 3875852 GATCATTAAAACCAA CAGGAGTACC GCACT GGTACTCCTG CGAATAAATAACTAT EcSMS35_3810 3876560 - 3875901 - | putative Mg2+ transporter-C (MgtC) family protein TERM 5080 3876564 - 3876594 + r 100 -12.6 -4.93968 | opp_overlap 3876564 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT TERM 5081 3876594 - 3876564 - R 100 -14.8 -4.93595 | opp_overlap 3876564 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT hdeB 3876950 - 3876612 - | HdeB protein EcSMS35_3812 3877386 - 3877054 - | hns-dependent expression protein A (HdeA) TERM 5082 3877236 - 3877223 - G 72 -6.7 -4.25283 | AGTGCTTCAGCAAAA CCAAC TGCA GTTGG CTGGAAGGATTCGTC EcSMS35_3813 3877668 - 3878213 + | putative HdeD protein TERM 5083 3878230 - 3878264 + F 100 -20.3 -3.28003 | opp_overlap 3878240 TATCCCTATTTCCAC CTGGATCATAGTCAC ATTAA GTGACTATGATCCAG TTAATACTCTCTTAG TERM 5084 3878658 - 3878638 - f 100 -14.1 -4.65263 | ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC CTAAGTCGAAACAAG gadE 3879011 - 3879538 + | transcriptional regulator GadE TERM 5085 3879701 - 3879719 + TF 100 -3.1 -6.02345 | opp_overlap 3879701, overlap 3879678 AATGCTGGCAGAAAC TGTTGGC AGAAC GGCAACA TTTTTTTTGTCGTTG EcSMS35_3815 3879947 - 3879855 - | hypothetical protein TERM 5086 3879967 - 3879950 - gH 70 -9.8 -2.97475 | overlap 3879949 CCTGCGATGACAAAT CGGCGG AAAACG CCGCCG CCATGACGCCTGAGG TERM 5087 3880123 - 3880104 - gH 74 -9.4 -3.31415 | TATCATTAAACGCAA CTTTATCG AAGG CGATAAAG TGAACCAGGGCGATT TERM 5088 3880687 - 3880673 - gH 71 -7.8 -3.84712 | overlap 3880674 CAACGGTAGATGAAA CCACGG GCT CCGTGA CGTTACGGGCGATTT mdtE 3879877 - 3881034 + | multidrug resistance protein MdtE TERM 5089 3883941 - 3883928 - g 70 -5.2 -4.40311 | AGAAAGAAGGGAAAA CGCC GATAGA GGCG ATCATCGAAGCGGCG mdtF 3881059 - 3884172 + | multidrug resistance protein MdtF TERM 5090 3884184 - 3884217 + T 100 -14.8 -3.78953 | opp_overlap 3884181 3884184 3884186 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 5091 3884217 - 3884184 - T 82 -12.6 -2.92667 | opp_overlap 3884184, overlap 3884181 3884186 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 5092 3884215 - 3884186 - T 71 -9.4 -3.01269 | opp_overlap 3884184, overlap 3884184 3884181 AACGTGTAAATGAGA GTAAGGTTGAAC GTGAAG GTTCAGCCTTAC TCTTTCCTGCTAACC TERM 5093 3884463 - 3884450 - T 71 -9.5 -2.99057 | overlap 3884447 TGCGAAAGAGAATTA GCCGG TAGC CCGGC AGAAATCATCAGGGA gadW 3885263 - 3884535 - | transcriptional regulator GadW TERM 5094 3885179 - 3885196 + g 82 -2.7 -5.28683 | overlap 3885181 CCAGCAGCAGGATAC TCTCGTT ATGC AACGATA TTTTTTGCTGTTCAT TERM 5095 3885589 - 3885607 + r 100 -5.2 -6.06529 | GCAGACTATCCTCTT CCCGGT CCCCTAT GCCGGG TTTTTTTTATGTCTG gadX 3886456 - 3885632 - | transcriptional regulator GadX TERM 5096 3886800 - 3886755 - R 80 -10.5 -3.72324 | opp_overlap 3886759, overlap 3886759 TATTGCGATTAATAA GCAACCGAATGCCCAACTGTT TTTT AAAGGTTGGGCATTCGGTTTT TACAACGTTATGTTA TERM 5097 3886759 - 3886796 + r 100 -17.9 -4.60255 | opp_overlap 3886755 3886759 GCGATTAATAAGCAA CCGAATGCCCAACTGTT TTTT AAAGGTTGGGCATTCGG TTTTTACAACGTTAT TERM 5098 3886796 - 3886759 - R 100 -15.7 -3.56142 | opp_overlap 3886759, overlap 3886755 GCGATTAATAAGCAA CCGAATGCCCAACTGTT TTTT AAAGGTTGGGCATTCGG TTTTTACAACGTTAT gadB 3888216 - 3886816 - | glutamate decarboxylase GadB TERM 5099 3888417 - 3888392 - R 100 -14.1 -5.08601 | opp_overlap 3888392 3888387 TTATCGTAATAAAAA TCGCCCAAACA TTCC TGTTCGGGCGA TTAAATTAATTATTG TERM 5100 3888392 - 3888417 + r 83 -11.9 -3.26428 | opp_overlap 3888392, overlap 3888387 TTATCGTAATAAAAA TCGCCCAAACA TTCC TGTTCGGGCGA TTAAATTAATTATTG EcSMS35_3821 3889824 - 3888427 - | di-haem cytochrome c peroxidase family protein TERM 5101 3888946 - 3888969 + g 70 -3.8 -4.62471 | gap 1, overlap 3888949 CGGATAGACTTCGAG GAACTGC-GCT TTA AGCTGCGGATC TTTTTCCAGCTTAGC EcSMS35_3822 3890005 - 3890124 + | hypothetical protein TERM 5102 3891433 - 3891422 - g 72 -5.8 -4.30576 | CTGGGATGATGAAAA CGGT ATCT ACCG CGATTACGACTGGCG treF 3890229 - 3891878 + | cytoplasmic trehalase TreF TERM 5103 3891922 - 3891879 - T 85 -11.2 -3.51329 | opp_overlap 3891882 3891921, overlap 3891882 TACGGTGAACCATAA TATTTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAATTA TCCTCTTCAGGAGGA TERM 5104 3891882 - 3891919 + T 100 -12.9 -3.52073 | opp_overlap 3891882 3891879 GGTGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA TERM 5105 3891919 - 3891882 - T 84 -12.9 -2.59447 | opp_overlap 3891882, overlap 3891879 GGTGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA EcSMS35_3824 3892531 - 3891929 - | LuxR family transcriptional regulator TERM 5106 3893087 - 3893121 + G 91 -9.2 -4.62772 | opp_overlap 3893087 3893088, overlap 3893088 3893089 CAGTTGTTCATCAAA GTCGCTGAGCTGGAAA GTT TTTCCCGCGCAGCGGA TTTCTTTGCTTTGCC TERM 5107 3893120 - 3893088 - g 70 -10.5 -2.83522 | opp_overlap 3893087 3893088 3893089, overlap 3893087 AGTTGTTCATCAAAG TCGCTGAGCTGGAAA GTT TTTCCCGCGCAGCGG ATTTCTTTGCTTTGC TERM 5108 3893088 - 3893120 + G 83 -12.7 -3.36578 | opp_overlap 3893088 3893087, overlap 3893087 3893089 AGTTGTTCATCAAAG TCGCTGAGCTGGAAA GTT TTTCCCGCGCAGCGG ATTTCTTTGCTTTGC TERM 5109 3893089 - 3893119 + G 84 -14 -2.60863 | opp_overlap 3893088 3893087, overlap 3893088 3893087 GTTGTTCATCAAAGT CGCTGAGCTGGAAA GTT TTTCCCGCGCAGCG GATTTCTTTGCTTTG EcSMS35_3825 3892979 - 3893950 + | LysR family transcriptional regulator EcSMS35_3826 3893999 - 3895012 + | putative ribonuclease TERM 5110 3895485 - 3895505 + G 79 -9.7 -3.73106 | GTCCTTGTCGCCTCT CTCATTGGC ACG GCCATTGAG TTCTTCGACTTTTAC TERM 5111 3895640 - 3895650 + G 75 -4.6 -4.86773 | CGTCGCGCGCCCCAT TGGC TCT GCCG TTTTTGGTCATTTTG TERM 5112 3896382 - 3896362 - g 77 -8.3 -4.07568 | TTGGTCGCCGTAAAA GCATGGTAA TCA TCACCACGC TGATCATCCTGTTCG EcSMS35_3827 3895404 - 3896726 + | MFS transporter, metabolite:H+ symporter (MHS) family protein TERM 5113 3896763 - 3896739 - T 84 -8.5 -4.32048 | TAATAAGAGTGAAAA GCCTGATGCGC TAC GCTTATCAGGC CAGAATTTCCATACA TERM 5114 3896905 - 3896866 - T 72 -10.2 -2.90751 | gap 1, opp_overlap 3896866 3896874, overlap 3896865 GCCAACAATCTAAAT CTGTTTAATTGCCGGATGT CAG ACATCCGGCAATTAT-CAT CACTTCTTCATCTGC TERM 5115 3896874 - 3896898 + T 100 -17.3 -3.45434 | opp_overlap 3896866 3896865, overlap 3896866 TCTAAATCTGTTTAA TTGCCGGATGT CAG ACATCCGGCAA TTATCATCACTTCTT EcSMS35_3828 3898965 - 3896905 - | AsmA family protein TERM 5116 3897025 - 3896980 - G 77 -11.7 -3.15861 | gap 1, overlap 3896970 3896967 GATCAGCGCCAGTAA CGCCGCCGCTGGCGTAACCAGC GTT GCCAGTGCCGCC-GCGACGGCT CCGCGAGCAATCAAC TERM 5117 3898905 - 3898883 - G 72 -7 -4.1899 | overlap 3898896 CGATTCCAGTCAAAA GTTGCAATCA AAA TGATCGCCAC GACAATCAACAACAA EcSMS35_3829 3899649 - 3899035 - | cyclic diguanylate phosphodiesterase EcSMS35_3830 3899997 - 3899875 - | hypothetical protein TERM 5118 3900812 - 3900799 - g 82 -3.1 -5.27335 | CTGCCGAAAGAAAAA GTGAT CGAT ACCAC CGCAGCTGGCGACTC kdgK 3900034 - 3900963 + | 2-dehydro-3-deoxygluconokinase TERM 5119 3900967 - 3901008 + F 80 -10.3 -3.7829 | overlap 3900970 3900974 ATGCCTGCGTAATGG TTTTTGACGGAGAACGGGT AGAT ATTCGTTCTCCGTTAATAG TTTCGTCGGTATACT TERM 5120 3900970 - 3901005 + F 89 -14.2 -2.97934 | overlap 3900967 3900974 CCTGCGTAATGGTTT TTGACGGAGAACGGGT AGAT ATTCGTTCTCCGTTAA TAGTTTCGTCGGTAT TERM 5121 3900974 - 3901001 + F 90 -12.8 -3.34227 | overlap 3900970 3900967 CGTAATGGTTTTTGA CGGAGAACGGGT AGAT ATTCGTTCTCCG TTAATAGTTTCGTCG EcSMS35_3832 3901058 - 3902263 + | hypothetical protein TERM 5122 3903846 - 3903836 - g 100 -4 -5.77571 | AGCAAAAAATAAAAA TATC CCT GATA AACAACGCGCCCAGG EcSMS35_3834 3902250 - 3904292 + | hypothetical protein EcSMS35_3833 3904800 - 3904270 - | putative lipoprotein TERM 5123 3904947 - 3904975 + r 100 -14.6 -4.10188 | opp_overlap 3904906 3904905 TTAATTACCGTTAAT CCCGGCAGCG CAGAAGAAA CGCTGCCGGG TTATTTATCACTGTG EcSMS35_3835 3906479 - 3904983 - | M16 family peptidase TERM 5124 3906532 - 3906515 - R 91 -6.9 -5.4505 | CCTGGTAATAAAAAA CTGCCCG TTGT CGGTCAG TCTAAATGACGTTAA TERM 5125 3906633 - 3906605 - R 100 -14 -4.52669 | opp_overlap 3906612 AAGAAGTGAAATAAA CCTGAACTCACC CAGGT GGTAAGTTCAGG CACAGGGGTCAATTA TERM 5126 3906686 - 3906657 - R 75 -9.3 -3.59315 | overlap 3906659 TCAATTATGCGCAAA CACCCGCACTC GGGGAAGG GAGTGCGGGCA TAAGTGGTGAGATTA TERM 5127 3906684 - 3906659 - R 85 -11.9 -3.37259 | overlap 3906657 AATTATGCGCAAACA CCCGCACTC GGGGAAGG GAGTGCGGG CATAAGTGGTGAGAT dctA 3907985 - 3906699 - | aerobic C4-dicarboxylate transport protein TERM 5128 3907763 - 3907751 - G 74 -7.7 -4.08317 | opp_overlap 3907762 CAATTTCAAAGTAAA GCAGT GCG ACTGC GCCGGTACGACCGAC EcSMS35_3837 3907989 - 3908087 + | hypothetical protein TERM 5129 3908130 - 3908109 - T 73 -4.4 -4.7657 | opp_overlap 3908113 3908115 CAAAAAGGTTAAAAA GTTTGAGC TGGCTC GCACAAAC CAGCACTTTTTAAAG EcSMS35_3838 3910117 - 3908168 - | putative diguanylate cyclase EcSMS35_3839 3913711 - 3910238 - | cellulose synthase operon protein C, truncated TERM 5130 3911490 - 3911506 + g 77 -8.7 -4.02132 | GTCGTGGTCACACCG GATGCGA CCA TCGCGTC TTTGTAGGTTTCCAG TERM 5131 3912382 - 3912403 + g 75 -4.4 -4.8543 | gap 1, opp_overlap 3912382 GCTGACTGGCAGAGA GC-GAGGCG ATAAA CGCTTCAGC TTTTTCTGGCGATTG TERM 5132 3913187 - 3913198 + g 70 -5.8 -4.24294 | ATTGCCCGGCGTATC CGCA TTAA TGCG TTTTAGCTGATTAAT bcsZ 3914805 - 3913693 - | cellulase TERM 5133 3913858 - 3913870 + g 75 -6.9 -4.36914 | opp_overlap 3913832, overlap 3913835 3913839 CTGGCGCTGAACGGC CTGCG CAT CGCGG TTTTGTAAAAAGGGC TERM 5134 3914071 - 3914061 - G 72 -8.2 -3.71873 | CTACCCACATGTAAA CGCG GAT CGCG TCGTAGCTGCTGATC bcsB 3917115 - 3914806 - | cyclic di-GMP binding protein TERM 5135 3915787 - 3915807 + g 84 -11.1 -3.79519 | TACCGGAATCCGCAG CAGCAGGCG GTT CGCCTCCTG TTTACTGCTCAGGTT TERM 5136 3916198 - 3916173 - G 75 -11.3 -3.01712 | gap 1, opp_overlap 3916164 3916163 3916165 TCGCTGCCTGCAACA GGTCTTT-GTCG TCA CGACCAAAGACC ACCAGCAGTTTGACG TERM 5137 3916321 - 3916311 - G 70 -4 -4.60487 | CATTAGTGGCAAAAA CAAT GGC ATTG CGATCCGGCAGTTGG bcsA 3919774 - 3917156 - | cellulose synthase (UDP-forming) TERM 5138 3919679 - 3919662 - G 83 -6.3 -4.90869 | gap 1, overlap 3919664 3919665 AGGATCAACCAAAAA CAGC-CGA GCG TCGCGCTG AAAGCCGACGCACCG EcSMS35_3843 3920523 - 3919771 - | YhjQ protein TERM 5139 3919991 - 3920011 + g 70 -9.7 -3.16191 | ATATCGTCCTGAACC TGACTGCCG ATA CGGAAGTCA TTAATCAAAATATGC EcSMS35_3844 3920723 - 3920535 - | hypothetical protein EcSMS35_3845 3921007 - 3922566 + | hypothetical protein bcsF 3922563 - 3922754 + | cellulose biosynthesis protein BcsF TERM 5140 3923728 - 3923742 + G 74 -2.7 -5.00884 | opp_overlap 3923728 GATGATGGGACATAA CGGCC AGTTC GGCGG TTTTTTGAAAGAAGT EcSMS35_3847 3922751 - 3924430 + | hypothetical protein TERM 5141 3924466 - 3924441 - T 100 -14 -5.03201 | AATAAGAACGAAAAA GGCCGCAGAG TTTCAC CCCTGCGGCC TGGTCCGGGCGCAAC EcSMS35_3848 3924684 - 3924517 - | hypothetical protein TERM 5142 3924691 - 3924732 + H 100 -13.2 -4.60797 | gap 2, opp_overlap 3924690 AAGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 5143 3924896 - 3924908 + G 86 -6.3 -5.06414 | overlap 3924901 AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 5144 3924950 - 3924925 - g 100 -14 -4.72272 | opp_overlap 3924901 TTTTCTTACGAAAAA GGCCGCAGAG TTTTAT CCCTGCGGCC TGATCCGGGCGCAAA EcSMS35_3849 3924865 - 3924996 + | hypothetical protein EcSMS35_3850 3925168 - 3925001 - | hypothetical protein TERM 5145 3925175 - 3925216 + H 100 -13.2 -4.60797 | gap 2, opp_overlap 3925174 TGGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 5146 3925380 - 3925392 + G 86 -6.3 -5.06414 | overlap 3925385 AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 5147 3925434 - 3925409 - g 100 -14 -4.72272 | opp_overlap 3925385 TTTTCTTACGAAAAA GGCCGCAGAG TTTTAT CCCTGCGGCC TGGTCCGGGCGCAAA EcSMS35_3851 3925293 - 3925469 + | hypothetical protein EcSMS35_3852 3925652 - 3925485 - | hypothetical protein TERM 5148 3925659 - 3925700 + H 95 -11 -4.60797 | gap 2 TAGAGTCAAGATTAG CCCCCGTGGTGTTGTCAGGT GCAT ACCTG-CAACG-TGCGGGGG TTTTCTCTCTCCAGC TERM 5149 3925864 - 3925876 + G 86 -6.3 -5.06414 | overlap 3925869 AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 5150 3925918 - 3925893 - g 100 -14 -4.72272 | opp_overlap 3925869 TTTTCTTACGAAAAA GGCCGCAGAG TTTTAT CCCTGCGGCC TGGTCCGGGCGCAAA EcSMS35_3853 3925777 - 3925953 + | hypothetical protein EcSMS35_3854 3926136 - 3925969 - | hypothetical protein TERM 5151 3926143 - 3926184 + H 95 -11 -4.60797 | gap 2 TAGAGTCAAGATTAG CCCCCGTGGTGTTGTCAGGT GCAT ACCTG-CAACG-TGCGGGGG TTTTCTCTCTCCAGC TERM 5152 3926347 - 3926359 + G 86 -6.3 -5.06414 | overlap 3926352 AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 5153 3926401 - 3926376 - g 100 -14 -4.72272 | opp_overlap 3926352 TTTTCTTACGAAAAA GGCCGCAGAG TTTTAT CCCTGCGGCC TGGTCCGGGCGCAAA EcSMS35_3855 3926316 - 3926447 + | hypothetical protein EcSMS35_3856 3926619 - 3926452 - | hypothetical protein TERM 5154 3926626 - 3926667 + H 100 -11.8 -4.60797 | gap 2, opp_overlap 3926625 TAGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAATAT-GCGGGGG TTTTCTCTCTCCAGC EcSMS35_3857 3926634 - 3926804 + | hypothetical protein EcSMS35_3858 3927035 - 3928306 + | serine transporter family protein TERM 5155 3928326 - 3928308 - T 79 -9.5 -3.76402 | opp_overlap 3928308 AGCTGATTGAGTAAA CCGGAGC GCACG GCCCCGG TTTTGTGAGTTAACG TERM 5156 3928308 - 3928326 + T 80 -7.3 -4.4715 | opp_overlap 3928308 AGCTGATTGAGTAAA CCGGAGC GCACG GCCCCGG TTTTGTGAGTTAACG dppF 3929340 - 3928336 - | dipeptide ABC transporter, ATP-binding protein DppF TERM 5157 3928424 - 3928376 - G 78 -7.4 -4.32583 | gap 2, overlap 3928373 3928380 TCAACAGCAAAACAA GCTACCAGTTGACCGCCGTAGTCT TTT AG-CTGCGGCTG-CAACTGGGTGC AGGGGCCGAAGCGCC dppD 3930320 - 3929337 - | dipeptide ABC transporter, ATP-binding protein DppD TERM 5158 3930221 - 3930270 + g 70 -10.7 -2.83403 | gap 1, overlap 3930220 3930263 CAATCCCGACTACTT CGCCCTGTTTTACGCTGTAG-CTG ATG CGGTCTACGGCGCGGAACGGTGCG CTTTCGTCGCCGAAA dppC 3931233 - 3930331 - | dipeptide ABC transporter, permease protein DppC dppB 3932262 - 3931243 - | dipeptide ABC transporter, permease protein DppB EcSMS35_3864 3932280 - 3932423 + | hypothetical protein dppA 3934020 - 3932413 - | dipeptide ABC transporter, periplasmic dipeptide-binding protein TERM 5159 3933164 - 3933180 + g 81 -9.5 -4.02424 | TTCAGCCCCGGCATT TCCATCA GGT TGATGGA TTTATCCTGCTTCAT EcSMS35_3865 3934635 - 3934372 - | hypothetical protein TERM 5160 3934687 - 3934702 + r 71 -8.2 -3.72742 | opp_overlap 3934685, overlap 3934688 ACGTCGAATCGAACC TCCCCG CCCC CGGGGG TTCTCTTCCTCATGA TERM 5161 3934735 - 3934753 + r 100 -14.6 -4.25074 | opp_overlap 3934735 TACAGATGCAAAAAA GCCTGCTC GTT GAGCAGGC TTTTCGAATTTGGTC TERM 5162 3934753 - 3934735 - R 100 -14.6 -5.14477 | opp_overlap 3934735 TACAGATGCAAAAAA GCCTGCTC GTT GAGCAGGC TTTTCGAATTTGGTC EcSMS35_3867 3936623 - 3934932 - | membrane-associated sulfatase TERM 5163 3936862 - 3936845 - R 100 -12.7 -4.88129 | opp_overlap 3936843 3936842 AAAAAGCAGTAAAAA GGGCCAG TTAA CTGGCCC AAATTTTACGCGTCA EcSMS35_3868 3938155 - 3936947 - | major facilitator family transporter TERM 5164 3938249 - 3938235 - R 76 -6.4 -4.56775 | overlap 3938236 ATGCCTGGGGAAAAA CGGCAT GAA ATGCCA TCAGAACGGAATGAA EcSMS35_3869 3939082 - 3938384 - | hypothetical protein TERM 5165 3939411 - 3939396 - g 83 -6.1 -5.00884 | ACCGTCCTCAAAAAA CGCGA AAACTA TCGCG CCAGCTTTCATCAGT tag 3939240 - 3939803 + | DNA-3-methyladenine glycosylase I EcSMS35_3872 3939800 - 3940240 + | acetyltransferase bisC 3942542 - 3940209 - | biotin sulfoxide reductase TERM 5166 3941433 - 3941417 - G 75 -11.5 -3.10344 | CCTGCATGGAAGAGA GCACCGC AGC GCGGCGC GTGGGGTTACCACCA TERM 5167 3941655 - 3941667 + g 81 -6.2 -4.74706 | overlap 3941653 ACCACAAATCTCTGC CGCC CATTC GGCG TTTTTCGCTATTCCG TERM 5168 3941863 - 3941892 + g 72 -4.3 -4.61231 | gap 1, opp_overlap 3941850 3941855, overlap 3941864 AAGAAATCGACGGTT TCCGATC-GCATTG GAT CAATGCAGATCAGC TTTTTCCCGCTGTCA TERM 5169 3942669 - 3942642 - H 71 -9.2 -3.30124 | gap 1 GTTCACGCGGCATAA TCTCCCGCCACGG AAC CCGTGGCAA-AGA ATAAAAAGGTTATTA EcSMS35_3873 3942695 - 3943354 + | OmpA family protein TERM 5170 3943364 - 3943391 + F 85 -10.7 -3.82481 | CTGTAATCCCTTTCA TGTCAGGTGAT ACAGAA ATCACCTGGCA TTCTTCAGTTTTCCT TERM 5171 3943592 - 3943574 - g 70 -3.8 -4.64334 | overlap 3943576 3943578 AACCGTCGAACAAAA TGCAGCAA TTT TTGCCGAA GCTGAAGGCTTGCTG tkrA 3943458 - 3944432 + | 2-ketogluconate reductase TERM 5172 3944447 - 3944480 + T 85 -10.5 -4.2528 | gap 1, opp_overlap 3944454, overlap 3944454 AGCCGCGACTGCGTG GAGTAA-AGCCCGA TAATCGC TCGGGCTTTTACTC TTTATTGGGTTGCAG TERM 5173 3944454 - 3944472 + T 80 -7.4 -4.55446 | opp_overlap 3944454, overlap 3944447 ACTGCGTGGAGTAAA GCCCGA TAATCGC TCGGGC TTTTACTCTTTATTG EcSMS35_3875 3945192 - 3944482 - | putative lipoprotein EcSMS35_3876 3945626 - 3945916 + | hypothetical protein TERM 5174 3945943 - 3945962 + F 100 -13.6 -4.08692 | CTTTATTGCTGTTTA CGGTCCTG ATGA CAGGACCG TTTTCCAACCGATTA EcSMS35_3877 3946197 - 3946409 + | cold shock DNA-binding protein TERM 5175 3946438 - 3946457 + T 100 -11.4 -6.11392 | opp_overlap 3946428 3946423 3946436 3946438 GCACAGAATCTAAGA TCCCTGCC AAAT GGCGGGGA TTTTTTTATTTGTTT TERM 5176 3946457 - 3946438 - T 70 -9.2 -3.19511 | opp_overlap 3946438, overlap 3946428 3946423 3946436 GCACAGAATCTAAGA TCCCTGCC AAAT GGCGGGGA TTTTTTTATTTGTTT TERM 5177 3946589 - 3946570 - T 100 -13.6 -4.1673 | opp_overlap 3946586, overlap 3946581 CAACGCCGTAAGAAA GGCGGGAA TAAC TTCCCGCC GAAGACGCTTACTCT hokA 3946750 - 3946598 - | protein hokA TERM 5178 3947002 - 3946986 - g 76 -3.7 -4.92363 | AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGTGTTAGTGC EcSMS35_3879 3946830 - 3947351 + | IS150 transposase orfA TERM 5179 3948181 - 3948149 - g 100 -13.6 -4.55128 | opp_overlap 3948149 AGCCTGAAATTAAAA GGTCTGACTCCAAT TGAAT ATCGGAATCAGACC TATATGCCTCGTGTT EcSMS35_3880 3947348 - 3948199 + | IS150 transposase orfB TERM 5180 3948383 - 3948361 - T 86 -3.5 -5.48303 | ATAATCCTAAAAAAA TCTCATAAA ATTAA TATATGAGA CAATCTTTATTCAGC TERM 5181 3948458 - 3948441 - T 100 -12.7 -5.28176 | opp_overlap 3948441 TTTAGCGATAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGACG TERM 5182 3948441 - 3948458 + T 100 -12.7 -4.72272 | opp_overlap 3948441 TTTAGCGATAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGACG glyS 3950546 - 3948477 - | glycyl-tRNA synthetase, beta subunit TERM 5183 3949987 - 3949977 - G 74 -8.2 -3.86346 | CGACTCGCCCATAAA GCGG TGA CCGC GAATCACGCGATCGG glyQ 3951467 - 3950556 - | glycyl-tRNA synthetase, alpha subunit TERM 5184 3950762 - 3950780 + g 70 -6.7 -4.12254 | gap 1 GCAGCGGATTTTCCA GCGCCAGC AGCT GCTG-CGC TTCTTTCTCGTACTG EcSMS35_3883 3951870 - 3951562 - | hypothetical protein TERM 5185 3952200 - 3952212 + G 71 -3.3 -4.84363 | TTCTGCCTCTCGTGT CAGCG TGC CGCTA TTTTTCATGATTTCC EcSMS35_3884 3952045 - 3953040 + | acyltransferase family protein TERM 5186 3953072 - 3953047 - T 100 -11.9 -4.90778 | opp_overlap 3953047 3953038 GTGAGTTAAATAAAA GCCCGGTCA CATTGGAC TGACCGGGC TTATGTGAATTATTC TERM 5187 3953047 - 3953072 + T 89 -11.9 -3.57629 | opp_overlap 3953047, overlap 3953038 GTGAGTTAAATAAAA GCCCGGTCA CATTGGAC TGACCGGGC TTATGTGAATTATTC EcSMS35_3885 3953519 - 3953082 - | hypothetical protein EcSMS35_3886 3953906 - 3953565 - | hypothetical protein TERM 5188 3953631 - 3953613 - G 82 -2.4 -5.42131 | CAAGCAGACAAAAAA GGCGAT GGGATAG ATCACC ATTTCATAAGCATTG xylB 3955529 - 3954075 - | xylulokinase TERM 5189 3954503 - 3954488 - G 77 -3.2 -5.04868 | opp_overlap 3954489, overlap 3954489 TCAAACCAAAGAAAA CCCC CTTCGCCT GGGG ATTGTTGTGTGGCGT TERM 5190 3955579 - 3955551 - R 87 -5.3 -5.40072 | gap 1, opp_overlap 3955576, overlap 3955552 CGTTCCTTAAAAAAA TGCCCGG-TATC GCTACT GATAACCGGGCC AACGGACTGCACAGT TERM 5191 3955578 - 3955552 - R 75 -8.8 -3.83561 | gap 1, opp_overlap 3955576, overlap 3955551 GTTCCTTAAAAAAAT GCCCGG-TATC GCTACT GATAACCGGGC CAACGGACTGCACAG xylA 3956923 - 3955601 - | xylose isomerase TERM 5192 3956466 - 3956483 + g 74 -8.3 -3.86822 | GGGTTCGTCGCCGCA CCCGCGC CATA GCGAGGG TTTGTAAAGCAGTTA xylF 3957289 - 3958281 + | D-xylose ABC transporter, periplasmic D-xylose-binding protein TERM 5193 3958285 - 3958313 + F 100 -12.4 -4.0641 | opp_overlap 3958272 AGCGAGCTGTAAGCG TTACGCCCCGGC GCGGA GCGGGGGCGTGA TTTCTCTCCATGCCG TERM 5194 3958705 - 3958681 - g 78 -9.5 -3.90112 | opp_overlap 3958684 3958685, overlap 3958684 TCCTGGGTAACGAAA TAACCCATAAT GGC ATTATGGATTA TGACCTGATGACGCT TERM 5195 3958702 - 3958684 - g 70 -6.8 -4.0825 | opp_overlap 3958684 3958685, overlap 3958681 TGGGTAACGAAATAA CCCATAAT GGC ATTATGGA TTATGACCTGATGAC TERM 5196 3959608 - 3959598 - g 95 -6.8 -5.1963 | opp_overlap 3959592 3959598, overlap 3959599 GGCAATCAACAAAAA GCGA TCC TCGC TCGCTGTCTGTTACT xylG 3958359 - 3959900 + | D-xylose ABC transporter, ATP-binding protein xylH 3959878 - 3961059 + | D-xylose ABC transporter, permease protein TERM 5197 3961076 - 3961107 + F 100 -16.8 -4.7078 | opp_overlap 3961082 3961083 TTTGATAAAAATTTT CTCAAAGCCGGTAA CGTA TTACCGGTTTTGAG TTTTTGCATGATTCA TERM 5198 3961448 - 3961466 + G 81 -6 -4.81249 | opp_overlap 3961448 3961463 TGCCACCGATAACTA TGCGCT GGTTGAA AGCGCA TTTTTGCATTTAAAA TERM 5199 3961484 - 3961504 + G 74 -3.2 -4.98436 | TTTGCATTTAAAAGA GAAAGGCG TTAAC CGCTTTGC TTTTTATGGTCTTCC xylR 3961137 - 3962315 + | xylose operon regulatory protein TERM 5200 3962408 - 3962379 - T 100 -15.1 -4.33274 | CCGATACGAGCAAAA GCCTTATCCGCCT GACA AGTCGGATAAGGC TCGAGGAAATGCAAT bax 3963247 - 3962423 - | protein bax TERM 5201 3963004 - 3963014 + g 71 -2.4 -4.92777 | overlap 3963004 AAGGCATTACGGTCC GGAG AAA CGCC TTTTTCCTTGGTGTT malS 3963567 - 3965597 + | alpha-amylase, periplasmic TERM 5202 3966685 - 3966698 + G 81 -6.7 -4.63486 | opp_overlap 3966685 TGCGCCTGTCTGAAA CGGTT ATCA AACCG TTTTATTACCAGCGT TERM 5203 3966867 - 3966855 - g 71 -9.1 -3.54741 | TACCAGCGCCTGAAA GCACG GGG CGTGC TGATGGTGCCGGGGC EcSMS35_3895 3965775 - 3967028 + | putative valine--pyruvate aminotransferase EcSMS35_3896 3967653 - 3967180 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein EcSMS35_3897 3968603 - 3967755 - | IclR family transcriptional regulator TERM 5204 3968672 - 3968684 + H 73 -2.7 -5.10029 | GATAATTTATAACCA CTTGA TTT TTAAG TTTTTTGAAATTCAT TERM 5205 3968802 - 3968790 - H 81 -3.3 -5.41746 | AAGCGTTCAAAAAAA CAAGG AAG CCTGG GATGAAAGTGACATT dlgD 3968804 - 3969802 + | 3-dehydro-L-gulonate 2-dehydrogenase EcSMS35_3899 3969814 - 3970281 + | hypothetical protein EcSMS35_3900 3970399 - 3970872 + | TRAP transporter, DctQ-like membrane protein TERM 5206 3971018 - 3971057 + G 81 -10 -3.96327 | opp_overlap 3971011 3971025, overlap 3971021 GGCACAAACGCTGGT GAACGGAGCCGACAGC TTCTCCCT GCTGGCGATTCCGTTC TTTGTGCTGGCGGGT TERM 5207 3971868 - 3971886 + G 72 -8.2 -3.73088 | opp_overlap 3971872, overlap 3971878 GGCATGGTCATGGAT TTAACGCC GAC GGTGTTAA TTCTTACTCCGGTAT EcSMS35_3901 3970875 - 3972152 + | TRAP transporter, DctM subunit EcSMS35_3902 3972165 - 3973151 + | TRAP transporter solute receptor DctP family protein lyx 3973155 - 3974651 + | cryptic L-xylulose kinase sgbH 3974648 - 3975310 + | 3-keto-L-gulonate-6-phosphate decarboxylase SgbH TERM 5208 3975827 - 3975807 - g 82 -3.1 -5.22943 | overlap 3975808 AGCAAATGGAAAAAA TGGGACGAG ATG CTCGCCTCG CCGTGGTTCACCGTC EcSMS35_3905 3975303 - 3976163 + | putative hexulose-6-phosphate isomerase TERM 5209 3976191 - 3976175 - g 70 -5 -4.4773 | TTAGAGCAACTAAAA GCCGAC GTGCT GGCGGC GAATCTGGCGCTTCC TERM 5210 3976708 - 3976693 - g 83 -6 -5.00616 | overlap 3976695 CGCCTGGGGAAAAAA CGCCGC CGAT GCGGTG CATAACGCCGTGGTG sgbE 3976157 - 3976852 + | L-ribulose-5-phosphate 4-epimerase sgbE EcSMS35_3907 3977699 - 3976884 - | AraC family transcriptional regulator TERM 5211 3978035 - 3978001 - g 77 -3.4 -5.0538 | overlap 3978003 3978004 CTGTACGGGAAAAAA TAGGCTACGGCCTGGG TGA CGCAGGCGGCACCGTA ATAACTTGCCTGATC EcSMS35_3908 3977925 - 3979325 + | sugar glycoside-pentoside-hexuronide family protein TERM 5212 3980038 - 3980022 - g 70 -5 -4.44797 | CCAGGAATATGAAAA GCGCGG GCAGA CCTCGC ACTGGCACACCTACG EcSMS35_3909 3979336 - 3981306 + | hypothetical protein TERM 5213 3981460 - 3981443 - T 73 -4.7 -4.8622 | overlap 3981445 CCGGTGAATTAAAAA CGCCAGC TCAC GCCGGTG ACAAAGGTAAAACTC EcSMS35_3910 3982176 - 3981436 - | MltA-interacting protein MipA TERM 5214 3982409 - 3982427 + G 76 -7.5 -4.18197 | TCGCACAGGCCAACG TCAGCAA ATATC TTGCTGA TTTTGAATCAAAAGT TERM 5215 3982671 - 3982657 - g 72 -7.2 -4.27483 | opp_overlap 3982663, overlap 3982662 ATCGATAAAATTAAA GATATC GGT GATATC ACCTTATCGCTAAAA TERM 5216 3982783 - 3982793 + G 81 -6.8 -4.63932 | CCAAAAGATGAATCG CTGG TTG CCAG TTTTATTACCCAATA TERM 5217 3983263 - 3983210 - g 74 -9.8 -3.5394 | gap 3, overlap 3983211 AAATGCTGCGTGAAA TTCGCCACCAGCTTGCTCA-GTCGCAG CAA CTGCGGCCTGAACAAGC-GGCGG-AAA GCGAAGATTAATGAT TERM 5218 3983263 - 3983211 - g 73 -11.4 -2.72043 | overlap 3983210 AATGCTGCGTGAAAT TCGCCACCAGCTTGCTCA-GTCGCAG CAA CTGCGGCCTGAACAAGC-GGCGGAAA GCGAAGATTAATGAT EcSMS35_3912 3982300 - 3983274 + | LysR family transcriptional regulator EcSMS35_3911 3984407 - 3983271 - | membrane fusion protein family protein EcSMS35_3913 3984736 - 3984413 - | hypothetical protein TERM 5219 3984718 - 3984706 - G 84 -7.7 -4.67478 | GAAATACAAAAATAA GCACT CCC AGTGC AAAATAATCCAGGAA EcSMS35_3914 3984918 - 3985061 + | hypothetical protein aldB 3986818 - 3985280 - | aldehyde dehydrogenase B TERM 5220 3986102 - 3986090 - G 71 -9.1 -3.55444 | opp_overlap 3986089 3986096 CGTTGAGCCGGTAAA CGCCA CTT TGGCG ATGCGTTTCGAGGTC TERM 5221 3986569 - 3986549 - G 85 -11.9 -3.66356 | overlap 3986554 ATCGGCAATCTTAAA CAGAATCGC CGC GCGATCCTG CACCGAAGTATGCGC EcSMS35_3916 3988221 - 3986926 - | Fic family protein TERM 5222 3987462 - 3987452 - G 72 -5.4 -4.46212 | TGGGCCAGCATAAAA TGCA GAA TGCA GGCACGGACCAACGG TERM 5223 3988051 - 3988069 + g 71 -3 -4.76171 | overlap 3988044 3988066 CGCCAGACGGGTAAG CGTCCACG CCA CATCGACG TTTTCTCCTTTTTTG TERM 5224 3988305 - 3988276 - R 79 -8.1 -4.37506 | opp_overlap 3988279, overlap 3988270 AGCAGGAAAGAGAAA CTATCTCAAAA AAAGCAAG TTTTGAGATAG TTGAAAAAGCGGCTG adhB 3989502 - 3988351 - | alcohol dehydrogenase II TERM 5225 3989631 - 3989605 - R 80 -5.9 -5.07486 | opp_overlap 3989605 TATTTTTAATAAAAA GCACGTTACAT TCATC AAATAACGTGC CTTCTTAACATTAAT selB 3991537 - 3989693 - | selenocysteine-specific translation elongation factor TERM 5226 3990833 - 3990849 + g 85 -10.1 -4.22009 | GTTAAGCGCGATACG CTGCCCG GCA TGGGCAG TTTCTGTTGGCTGAT TERM 5227 3991092 - 3991145 + g 71 -11.2 -2.94322 | gap 2, opp_overlap 3991109, overlap 3991090 3991109 ATTCCCCGACCTTCG GTTGCTGCGGTGATAAACAGTTTTGC CTCA GCAAAACCGTAT-TC-CCGCAGCACC TCCTTTACCTGGCGT TERM 5228 3991130 - 3991109 - G 76 -9.5 -3.85698 | opp_overlap 3991109 3991092 3991090 TGCTGCGGTGATAAA CAGTTTTGC CTCA GCAAAACCG TATTCCCGCAGCACC selA 3992925 - 3991534 - | L-seryl-tRNA selenium transferase TERM 5229 3991832 - 3991875 + g 77 -3.2 -5.14563 | opp_overlap 3991839, overlap 3991835 3991836 CGTTGTGCCTGGATT TGAATGACCTCTGCG-CTGC GGGTAA GCAGGCGCAG-GGTCGGTAA TTTTTTACTCAGAGC EcSMS35_3920 3993631 - 3993023 - | glutathione S-transferase TERM 5230 3993174 - 3993160 - G 70 -10 -3.13475 | overlap 3993148 CAACGGCACAGGCAA TGGCGA TAG TCGCCA GATTGACCGTATCGG TERM 5231 3993602 - 3993589 - G 70 -5.3 -4.35348 | ACAACAGAATAGAAA GTTTG CGTA CAAAC GGGCTGGTGTAGCTA TERM 5232 3993752 - 3993721 - R 74 -9.4 -3.34455 | opp_overlap 3993724, overlap 3993716 3993723 3993724 TGATGACAAACGCAA GATGGCCCGATACG TACG CATATCGGGCCTTG TAGATGAAACGACCT TERM 5233 3993750 - 3993723 - R 83 -12 -3.23449 | opp_overlap 3993724, overlap 3993721 3993716 3993724 ATGACAAACGCAAGA TGGCCCGATACG TACG CATATCGGGCCT TGTAGATGAAACGAC TERM 5234 3993749 - 3993724 - R 93 -15.5 -2.53346 | opp_overlap 3993724, overlap 3993723 3993721 3993716 TGACAAACGCAAGAT GGCCCGATACG TACG CATATCGGGCC TTGTAGATGAAACGA TERM 5235 3993724 - 3993749 + r 95 -13.3 -3.35679 | opp_overlap 3993724 3993723 3993721 3993716 TGACAAACGCAAGAT GGCCCGATACG TACG CATATCGGGCC TTGTAGATGAAACGA EcSMS35_3921 3997597 - 3993788 - | outer membrane autotransporter TERM 5236 3995844 - 3995834 - G 79 -4.6 -5.00884 | overlap 3995836 ATGTCCCTGAAAAAA GAGG CGC CCCC CCTGCTGCGTCATAC EcSMS35_3922 3998287 - 3997769 - | putative fimbrial protein FanH TERM 5237 3998192 - 3998219 + g 84 -10.6 -3.71848 | overlap 3998183 CGTAATCGGTAGGTT TGCACTTGCCGT TTGT GCAGCAAGTGCA TTATTACTCCAGAGA EcSMS35_3923 3998702 - 3998280 - | putative fimbrial protein FanG EcSMS35_3924 3999786 - 3998815 - | putative fimbrial protein FanF EcSMS35_3925 4000496 - 3999816 - | putative fimbrial assembly chaperone FanE EcSMS35_3926 4002861 - 4000504 - | putative fimbrial usher protein FanD TERM 5238 4001643 - 4001655 + g 74 -6.3 -4.51174 | AGCCTTTTAGATTCT TACCA TTA TGGTA TTTTGCTTGTGATAA TERM 5239 4002893 - 4002920 + r 72 -9.9 -3.1332 | opp_overlap 4002894 4002897, overlap 4002897 AAACATCAGGTAATA AGAAGGGAGGA GATTAA TCCTCCCTTCC TTCGCTCATATATTA TERM 5240 4002919 - 4002894 - R 100 -13.4 -3.70511 | opp_overlap 4002893 4002897, overlap 4002897 AACATCAGGTAATAA GAAGGGAGGA GATTAA TCCTCCCTTC CTTCGCTCATATATT TERM 5241 4002916 - 4002897 - R 79 -9.3 -3.97709 | opp_overlap 4002897 4002893, overlap 4002894 ATCAGGTAATAAGAA GGGAGGA GATTAA TCCTCCC TTCCTTCGCTCATAT TERM 5242 4002897 - 4002916 + r 71 -9.3 -3.38584 | opp_overlap 4002894 4002897, overlap 4002893 ATCAGGTAATAAGAA GGGAGGA GATTAA TCCTCCC TTCCTTCGCTCATAT EcSMS35_3927 4003460 - 4002933 - | putative fimbrial protein FanC TERM 5243 4003188 - 4003212 + g 71 -2 -5.00616 | overlap 4003192 GGTTGTTAAATTATT TGATGTCCAG CTAAT CTGGGCTCCA TTTTTTGCCAAGCAA EcSMS35_3928 4004205 - 4004711 + | sigma-70 domain-containing protein EcSMS35_3929 4004902 - 4005732 + | putative fimbrial operon positive regulatory protein FanR TERM 5244 4005829 - 4005789 - T 72 -3.2 -5.00895 | gap 1, opp_overlap 4005799 TGGACTAGACAAAAA GGGCTCGAG-TTTCGCTGC CTGA ACAGCGAATTCTCATGTCC TGTATTTGCAATTTT EcSMS35_3930 4007024 - 4005888 - | auxiliary membrane fusion protein family transporter TERM 5245 4006057 - 4006078 + g 76 -10.9 -3.27774 | gap 1, opp_overlap 4006057 ATGGTTCCCAGCACA CCGTCCGTGC CGG GCACG-ACGG TTAATGATTGCAGTA TERM 5246 4006078 - 4006057 - G 70 -10.9 -2.78463 | gap 1, opp_overlap 4006057 ATGGTTCCCAGCACA CCGTCCGTGC CGG GCACG-ACGG TTAATGATTGCAGTA EcSMS35_3931 4007491 - 4007027 - | hypothetical protein TERM 5247 4007664 - 4007649 - H 95 -3.3 -5.62288 | opp_overlap 4007649 CTAACAAAACAAAAA TGTGA CATTAC TCACA TTTAAATGCCATTTT TERM 5248 4009568 - 4009545 - g 75 -5.2 -4.59773 | opp_overlap 4009545 CTGGATCGTGAAAAA CTGACCCCGA CTTA TCTGGGTGAG TCTATCGCGGTGCCA mtlA 4007925 - 4009838 + | PTS system, mannitol-specific IIABC component TERM 5249 4009849 - 4009868 + F 100 -13.6 -3.64703 | opp_overlap 4009844 AGTAATCCAATCCTA CCCTCTCC TCAC GGAGAGGG TTTGGGTGAGGGAAA mtlD 4009933 - 4011081 + | mannitol-1-phosphate 5-dehydrogenase TERM 5250 4011509 - 4011535 + G 77 -12.2 -2.74144 | overlap 4011509 TGGTGAACTGCATTG CGTGGCGGCGTT ACC ACCGCCGCCACA GTTTGAACCTGCAGA TERM 5251 4011509 - 4011536 + G 85 -12 -3.57144 | gap 1, overlap 4011509 TGGTGAACTGCATTG C-GTGGCGGCGTT ACC ACCGCCGCCACAG TTTGAACCTGCAGAC mtlR 4011081 - 4011668 + | mannitol operon repressor EcSMS35_3935 4011888 - 4011679 - | hypothetical protein EcSMS35_3936 4012172 - 4012534 + | hypothetical protein TERM 5252 4012579 - 4012602 + T 79 -11.8 -2.61144 | gap 1, overlap 4012578 4012576 ACTCACGATTTACTC GCTCCTGC-TG GCA CATGCAGGAGC CTGTTTCAGAGATCG EcSMS35_3937 4013017 - 4012790 - | hypothetical protein TERM 5253 4013675 - 4013665 - g 81 -8.2 -4.35518 | AATCTGACATTAAAA GGCG TTT CGCC TAATAACCTGAAGTA EcSMS35_3938 4013092 - 4013775 + | putative lipoprotein TERM 5254 4013793 - 4013773 - f 100 -4.7 -6.04324 | opp_overlap 4013777, overlap 4013778 CGAAAAAACAAAAAA TAAATGCAG CTT CTGCGCTTA TATCAAGGAATAGAG TERM 5255 4015167 - 4015146 - g 70 -5.1 -4.30844 | opp_overlap 4015154, overlap 4015154 ACGTCACCAGCAAAA TCACCAATG TCAC CGCTGGTGA GCTCTCTGACACCAG TERM 5256 4015656 - 4015635 - g 81 -8.7 -4.30844 | overlap 4015642 4015643 ATGCCACCAGCAAAA TCACCAACG TCAC CGCTGGCGA CCTGACTGCTGGCAG TERM 5257 4015890 - 4015869 - g 81 -8.7 -4.30844 | overlap 4015876 4015877 ATGCCACCAGCAAAA TCACCAACG TCAC CGCTGGCGA CCTGACTGCTGGCAG EcSMS35_3939 4013819 - 4018468 + | haemagluttinin family protein TERM 5258 4018519 - 4018494 - f 83 -11.9 -3.15663 | opp_overlap 4018494 ACTTAGTGTGACTAA GGGCAATTCTC TGAT GAGGATTGCCC TTTTCTTTACCAGAC TERM 5259 4018494 - 4018519 + F 100 -14.1 -4.86731 | opp_overlap 4018494 ACTTAGTGTGACTAA GGGCAATTCTC TGAT GAGGATTGCCC TTTTCTTTACCAGAC lldP 4018766 - 4020421 + | L-lactate permease TERM 5260 4020839 - 4020866 + G 70 -5.6 -4.3467 | gap 1, opp_overlap 4020825 4020824 CGCTCAGCGAAGACC CGGACCT-CGCTT CGC AAGCGGACGTTCG TTTTCATCTGGCGAT TERM 5261 4020979 - 4020991 + G 71 -2.6 -5.02074 | CGCCAGCGGATGTAT CTGG TACCC CCGG TTTTTTCACAGCTGA EcSMS35_3941 4020421 - 4021197 + | putative L-lactate dehydrogenase operon regulatory protein LldR TERM 5262 4021310 - 4021292 - g 72 -11 -3.05343 | overlap 4021294 TGCATATTCTGAATA CACGCTGC GCC GCAACGTG GAAGATTTGTCAGAA TERM 5263 4021583 - 4021598 + G 74 -8.2 -3.91897 | GTTCCAGCTTTATGT GCTGCG CGAT CGCGGC TTTATGCGTAACGCA TERM 5264 4022352 - 4022337 - g 88 -11.8 -3.76379 | CAAGAGCTGAGTAAA GCGCCG GCGG CGGCGC TGGCTCCAATGGCGA lldD 4021194 - 4022384 + | L-lactate dehydrogenase (cytochrome) TERM 5265 4022408 - 4022430 + F 79 -12 -2.79302 | opp_overlap 4022399 4022397 TGAATATCTGCTATC CTGCCCCC GCACTAA GGGGGCAG TATGCTAAACATCGT EcSMS35_3943 4022432 - 4022905 + | RNA methyltransferase cysE 4023779 - 4022958 - | serine O-acetyltransferase TERM 5266 4023833 - 4023804 - R 71 -7.9 -3.78879 | gap 1, overlap 4023807 CACACGATAAGATAA TGA-CCGACCCG TTCTGCG CGGGCCGGGTCA TAGTGGTAACAAAGG TERM 5267 4023829 - 4023807 - R 70 -9.8 -2.97393 | overlap 4023804 ACGATAAGATAATGA CCGACCCG TTCTGCG CGGGCCGG GTCATAGTGGTAACA EcSMS35_3945 4024878 - 4023859 - | NAD-dependent glycerol-3-phosphate dehydrogenase TERM 5268 4024772 - 4024798 + g 78 -8.7 -4.1552 | gap 1 ATATGTTCAGGGTCA TGGCCCCAGAGG ACAA CCTC-GTGGCCA TTTCTTGCCAGGGTG TERM 5269 4024876 - 4024892 + g 81 -10.9 -3.69283 | overlap 4024887 AGCATTACGTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 4025345 - 4024878 - | protein-export chaperone SecB grxC 4025659 - 4025408 - | glutaredoxin 3 EcSMS35_3948 4026232 - 4025801 - | rhodanese domain-containing protein gpmI 4026477 - 4028021 + | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TERM 5270 4028092 - 4028141 + G 81 -9.3 -4.07568 | gap 1, opp_overlap 4028092, overlap 4028103 GCAGGTTTGCAATCA GGCCCATCAT-CTACGCCAGCGTT CTG AGCGCTGGCGTATTGTTGTGCGCC TTTTCCGCCCACGCG TERM 5271 4028103 - 4028129 + G 100 -17.4 -3.81022 | opp_overlap 4028092, overlap 4028092 ATCAGGCCCATCATC TACGCCAGCGTT CTG AGCGCTGGCGTA TTGTTGTGCGCCTTT TERM 5272 4028423 - 4028385 - g 93 -8.6 -4.77036 | opp_overlap 4028385 4028408 4028412, overlap 4028370 4028387 CTGGAGCAGCAAAAA GCCGCCCAGGAGCGCAGC CTC GCCGCGCAACTGGATGCC GCGTTTCGTCAGGGT EcSMS35_3950 4028055 - 4029314 + | M23 peptidase domain-containing protein TERM 5273 4029450 - 4029440 - g 77 -6.8 -4.48987 | opp_overlap 4029422 CCCGCACAACGAAAA CCAG GTG CTGG CGATGCCTTCCGCTA EcSMS35_3952 4029318 - 4030277 + | polysaccharide deacetylase family protein EcSMS35_3951 4031298 - 4030264 - | glycosyl transferase, group 2 family protein TERM 5274 4031527 - 4031510 - R 100 -12.7 -4.18018 | opp_overlap 4031510 TTTCCTCAGGCAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC TERM 5275 4031510 - 4031527 + r 100 -12.7 -3.83155 | opp_overlap 4031510 TTTCCTCAGGCAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC tdh 4032562 - 4031537 - | L-threonine 3-dehydrogenase TERM 5276 4032385 - 4032402 + g 74 -2.7 -5.00884 | ATTCATGGCCCACGA CCATC GGCACCGG GATGG TTTTTTGCGACCACT kbl 4033768 - 4032572 - | 2-amino-3-ketobutyrate coenzyme A ligase EcSMS35_3955 4033963 - 4033814 - | hypothetical protein TERM 5277 4034448 - 4034478 + G 93 -12.7 -3.95071 | overlap 4034477 TTCGCCAAATCCTGC CGGAAGCCAAC TCGCAGATT GTTGGCTTCCG TTATTTCAACGTTTA TERM 5278 4034575 - 4034563 - g 73 -9.1 -3.65522 | overlap 4034573 CACCCAGCTTAATAA CGGTG AAT CACCG AAGCTGTTCGAAGGT rfaD 4033982 - 4034914 + | ADP-glyceromanno-heptose 6-epimerase rfaF 4034924 - 4035970 + | lipopolysaccharide heptosyltransferase II rfaC 4035974 - 4036945 + | lipopolysaccharide heptosyltransferase I TERM 5279 4037009 - 4036968 - T 75 -9 -3.68024 | opp_overlap 4036969 4036976 4036981, overlap 4036969 4036976 4036981 CTCTTTAATAGATAA TTTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACAT ATTCATTACTTATCT TERM 5280 4037008 - 4036969 - T 82 -12.5 -2.80493 | opp_overlap 4036969 4036976 4036981, overlap 4036968 4036976 4036981 TCTTTAATAGATAAT TTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACA TATTCATTACTTATC TERM 5281 4036969 - 4037008 + T 90 -12.5 -3.30798 | opp_overlap 4036968 4036969 4036976 4036981, overlap 4036976 4036981 TCTTTAATAGATAAT TTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACA TATTCATTACTTATC TERM 5282 4036976 - 4037001 + T 75 -9.2 -3.67918 | opp_overlap 4036969 4036968 4036976 4036981, overlap 4036969 4036981 TAGATAATTTTGAAA TAAAATCAGC TTCCTT GCTGATTTTA TTTCACATATTCATT TERM 5283 4037001 - 4036976 - T 75 -9.2 -3.63305 | opp_overlap 4036976 4036969 4036981, overlap 4036969 4036968 4036981 TAGATAATTTTGAAA TAAAATCAGC TTCCTT GCTGATTTTA TTTCACATATTCATT TERM 5284 4036996 - 4036981 - T 75 -4.7 -4.88405 | opp_overlap 4036981 4036976 4036969, overlap 4036976 4036969 4036968 AATTTTGAAATAAAA TCAGC TTCCTT GCTGA TTTTATTTCACATAT TERM 5285 4036981 - 4036996 + T 75 -4.7 -4.89521 | opp_overlap 4036976 4036969 4036968 4036981, overlap 4036976 4036969 AATTTTGAAATAAAA TCAGC TTCCTT GCTGA TTTTATTTCACATAT EcSMS35_3959 4038268 - 4037015 - | O-antigen polymerase EcSMS35_3960 4039297 - 4038314 - | glycosyl transferase, group 2 family protein waaW 4040407 - 4039379 - | lipopolysaccharide 1,2-galactosyltransferase TERM 5286 4039762 - 4039742 - G 74 -7.7 -4.05529 | ACAATGACCAAAGAA CAGAATATT TAA AATATCCTG ATCAAGGCATTTATA TERM 5287 4039906 - 4039921 + g 78 -5.4 -4.7497 | gap 1 GAAGCCCCTCTATAG CCAGACG CTT CG-CTGG TTTTTCCTGCATAAA rfaY 4041125 - 4040433 - | lipopolysaccharide core biosynthesis protein RfaY rfaJ2 4042130 - 4041135 - | lipopolysaccharide 1,2-glucosyltransferase TERM 5288 4042190 - 4042172 - R 79 -4 -5.27938 | opp_overlap 4042151 ATCTTTAAATAAAAA TAATAAAT ATA ATTCATTA TCCCGTTAATTGGTT rfaI 4043163 - 4042147 - | lipopolysaccharide 1,3-galactosyltransferase TERM 5289 4042388 - 4042410 + g 93 -2.1 -5.65513 | ATTAATACGGCTTCA TCATTAATT GGACA AATAAATGA TTTTTTTAATTCATA TERM 5290 4042575 - 4042590 + g 70 -10.4 -3.18366 | opp_overlap 4042573 4042570, overlap 4042573 4042571 TAGCAGAAACGGACT CCTGCG CCCA CGCAGG TGTATTAATTAACAG rfaP 4043976 - 4043179 - | lipopolysaccharide core biosynthesis protein RfaP rfaG 4045093 - 4043969 - | lipopolysaccharide core biosynthesis protein RfaG rfaQ 4046148 - 4045090 - | lipopolysaccharide core biosynthesis glycosyltransferase RfaQ TERM 5291 4047182 - 4047157 - g 84 -7.5 -4.61482 | opp_overlap 4047155, overlap 4047160 GGGCGCAAAAAATAA TCAGGTGACCG TCAC CGGTAGCCTGA AATTCGATATTTCTG TERM 5292 4047708 - 4047698 - g 70 -6.8 -4.08945 | opp_overlap 4047698 ACTACGCTTGCAAAA GAGG TTT CCTC TTTACTCACCGACGC waaA 4046561 - 4047838 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 4047846 - 4048325 + | pantetheine-phosphate adenylyltransferase mutM 4049173 - 4048364 - | formamidopyrimidine-DNA glycosylase TERM 5293 4049253 - 4049224 - R 100 -13.7 -3.51924 | opp_overlap 4049224 4049231, overlap 4049231 GGGGCAGGCAGATAA CAAAAAACCCCGC CGGG GCGAGGTTTTTCG TTACATCAAAGCAAA TERM 5294 4049231 - 4049246 + r 81 -6 -4.88407 | opp_overlap 4049231 4049224, overlap 4049224 GCAGATAACAAAAAA CCCCGC CGGG GCGAGG TTTTTCGTTACATCA TERM 5295 4049246 - 4049231 - R 100 -8.2 -5.60689 | opp_overlap 4049224 4049231, overlap 4049224 GCAGATAACAAAAAA CCCCGC CGGG GCGAGG TTTTTCGTTACATCA rpmG 4049438 - 4049271 - | ribosomal protein L33 TERM 5296 4049315 - 4049339 + g 70 -3.6 -4.62872 | gap 1, opp_overlap 4049315 CGTGCTGGCGAACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGCTTAGT rpmB 4049695 - 4049459 - | ribosomal protein L28 TERM 5297 4049899 - 4049886 - R 72 -6.7 -4.2074 | overlap 4049889 TCCCGAACAGACAAA GATCC CGAA GGATC GCGCATAGCGGGTTA radC 4050580 - 4049912 - | DNA repair protein RadC coaBC 4050752 - 4051972 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 5298 4052282 - 4052310 + G 77 -3 -5.08601 | opp_overlap 4052286, overlap 4052287 4052297 GGACAGCTTCACCAT TCAACCTGGCGA ACGCA TCGCCCAGATGA TTTTTGTTCCGGTAG dut 4051950 - 4052408 + | dUTP diphosphatase TERM 5299 4052461 - 4052441 - f 79 -11.9 -2.50817 | overlap 4052440 4052438 4052436 AACGTCATAACATAG CCGCAAACA TTT CGTTTGCGG TCATAGCGTGGGTGC EcSMS35_3976 4052515 - 4053111 + | transcriptional regulator domain-containing protein TERM 5300 4053115 - 4053142 + T 86 -9.8 -4.41348 | opp_overlap 4053114 4053112 4053117, overlap 4053116 4053117 CAGTTGCAGTAATAT GACGCCGGATGA CTTT TCATCCGGCGAG TTTCTTTAAACGCCA TERM 5301 4053116 - 4053141 + T 91 -13.3 -3.24488 | opp_overlap 4053114 4053112 4053117, overlap 4053115 4053117 AGTTGCAGTAATATG ACGCCGGATGA CTTT TCATCCGGCGA GTTTCTTTAAACGCC TERM 5302 4053117 - 4053140 + T 100 -16.8 -2.54371 | opp_overlap 4053114 4053112 4053117, overlap 4053116 4053115 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC TERM 5303 4053140 - 4053117 - T 100 -16.8 -2.77523 | opp_overlap 4053117 4053116 4053115, overlap 4053114 4053112 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC pyrE 4053789 - 4053148 - | orotate phosphoribosyltransferase TERM 5304 4053847 - 4053830 - R 100 -11.3 -6.06529 | TACAGACAAAAAAAA GGCGACT CATC AGTCGCC TTAAAAATCAGTTTG rph 4054571 - 4053855 - | ribonuclease PH EcSMS35_3979 4054698 - 4055561 + | hypothetical protein TERM 5305 4056170 - 4056182 + G 75 -4.8 -4.83615 | opp_overlap 4056161 AGGCAACTTCGTGAA GACG AAAAG CGTC TTTTTCTGAGAAATG dinD 4055783 - 4056607 + | DNA-damage-inducible protein D TERM 5306 4057184 - 4057194 + G 75 -5.4 -4.614 | TGCTCGATGCGCTCG GACT GGT AGTC TTTTCTATCATTGGC EcSMS35_3982 4056898 - 4057515 + | hypothetical protein TERM 5307 4057535 - 4057560 + T 93 -11.9 -3.89354 | CAAAACCTGTGATCT GCTGGGCAG CCAGCCAA CTGCCCAGC TTCTTGATTTGCGCA ligB 4059194 - 4057512 - | NAD(+)-dependent DNA ligase LigB TERM 5308 4058573 - 4058537 - G 79 -4.4 -4.9725 | gap 2, overlap 4058539 ATGCCCAGACAAAAA CAGCCAGTGAGTTTAGCG TAT CGCTATTCCC-CTGGC-G CATCATCAGGCCAGC TERM 5309 4058572 - 4058539 - G 74 -8.1 -4.11141 | gap 1, overlap 4058537 GCCCAGACAAAAACA GCCAGTGAGTTTAGCG TAT CGCTATTCCC-CTGGC GCATCATCAGGCCAG TERM 5310 4059275 - 4059294 + H 70 -6.4 -4.18488 | AACGGAGTCTGCGAG GACGCTTC CTGA GAATCGTC TTTATTGCAGTGAAT TERM 5311 4059507 - 4059519 + G 82 -9.1 -4.15044 | opp_overlap 4059507 4059503 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA gmk 4059452 - 4060075 + | guanylate kinase rpoZ 4060130 - 4060405 + | DNA-directed RNA polymerase, omega subunit TERM 5312 4060980 - 4060962 - g 70 -5.2 -4.371 | opp_overlap 4060962, overlap 4060956 TCCACCACATTAAAA CCGAACTC GAA GAGCTGGG TTTTGAGGCGCTGTA spoT 4060424 - 4062532 + | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase trmH 4062539 - 4063228 + | tRNA guanosine-2'-O-methyltransferase recG 4063234 - 4065315 + | ATP-dependent DNA helicase RecG TERM 5313 4065341 - 4065318 - T 81 -9.5 -4.14392 | opp_overlap 4065319, overlap 4065319 4065334 CTCGAATGCGTAAAA GGCGGCGGT GAGAAT ACCGCCGCT TCATCGGTTAACCGG TERM 5314 4065319 - 4065340 + T 93 -13.7 -3.21912 | opp_overlap 4065318 4065319 4065334 TCGAATGCGTAAAAG GCGGCGGTG AGAA TACCGCCGC TTCATCGGTTAACCG TERM 5315 4065340 - 4065319 - T 86 -13 -3.08314 | opp_overlap 4065319, overlap 4065318 4065334 TCGAATGCGTAAAAG GCGGCGGT GAGAAT ACCGCCGC TTCATCGGTTAACCG gltS 4066554 - 4065349 - | sodium/glutamate symporter TERM 5316 4066218 - 4066228 + g 72 -6.8 -4.18018 | opp_overlap 4066218 GGCTAGCCATACCAA TGCC AAT GGCA TTTTGCATCACCAAC TERM 5317 4066768 - 4066779 + H 73 -4.4 -4.80455 | TTAAACGAGGATGTA GCAA ACGT TTGC TTTTCTCTTTCGGTC TERM 5318 4066880 - 4066863 - g 90 -9.9 -4.42386 | CCTCGAGTCAGAAAA TGCGCAA CCGG TTGCGCA GACTCAAAACAGCGA TERM 5319 4067767 - 4067755 - g 76 -9.1 -3.83026 | overlap 4067764 CCGCTGTACATGAAA CGCCT GAA AGGCG GCGTGCTGGCAAACG TERM 5320 4068102 - 4068115 + G 72 -6.7 -4.24002 | overlap 4068082 TGGTCTGGGCGTGTC TCAGC AGCC GCTGA TTTTGCAGTTTGCCC yicE 4066834 - 4068225 + | xanthine permease TERM 5321 4068232 - 4068220 - f 74 -4.1 -4.91109 | opp_overlap 4068199, overlap 4068226 4068227 4068230 TTCCCACCAGAAAAA CAGTA ATT CACTG GCGGCGGTAAGATAA TERM 5322 4068259 - 4068230 - f 84 -13 -2.63644 | gap 1, overlap 4068220 4068227 4068226 AAAAACAGTAATTCA CTGGCGGCGGTAA GATAA TTACCGCCGC-AG TCTCACCTCTTTCAC TERM 5323 4068644 - 4068590 - g 70 -4.8 -4.56597 | CCCTGGTGGCAAAAA GTGTCGACATTGCGCTAAGCAGTCGG CAA CTGACCGAACCACGCCATGTCGATAC CATCCTGCTGGAAAA EcSMS35_3990 4068346 - 4070055 + | AsmA family protein TERM 5324 4070091 - 4070062 - T 88 -9.3 -4.47707 | opp_overlap 4070060, overlap 4070059 4070065 GTGCAGTAAAAATAA GGACGCTAGCG GATATCAG CGCTAGCGTTC CCCGTTATTAGCGCA TERM 5325 4070088 - 4070065 - T 72 -9.6 -3.19331 | opp_overlap 4070060, overlap 4070062 4070059 CAGTAAAAATAAGGA CGCTAGCG GATATCAG CGCTAGCG TTCCCCGTTATTAGC EcSMS35_3991 4070779 - 4070099 - | hypothetical protein TERM 5326 4070730 - 4070716 - G 70 -5.6 -4.41616 | opp_overlap 4070728 ACTCTGGCAAACAAA CGCGGA AGG TCTGCG CAATGGCATGTGCTT EcSMS35_3992 4071692 - 4070760 - | ROK family protein TERM 5327 4071715 - 4071732 + r 71 -8.3 -3.43676 | opp_overlap 4071716, overlap 4071716 TCCTTGTTGCGTAAA AGGCGGG TTGC CCCGCCC TTCTGGCTTAGTACA TERM 5328 4071716 - 4071731 + r 79 -11.8 -2.65884 | opp_overlap 4071716, overlap 4071715 CCTTGTTGCGTAAAA GGCGGG TTGC CCCGCC CTTCTGGCTTAGTAC TERM 5329 4071731 - 4071716 - R 93 -11.8 -4.07568 | opp_overlap 4071716 4071715 CCTTGTTGCGTAAAA GGCGGG TTGC CCCGCC CTTCTGGCTTAGTAC EcSMS35_3993 4072600 - 4071740 - | fructose-bisphosphate aldolase, class II TERM 5330 4072138 - 4072122 - G 75 -5 -4.73613 | opp_overlap 4072121 4072125 4072129, overlap 4072123 GTACGAGCAATAAAA TCGGCG GCCTG CGCCGG ATCTGTGTAGGTCAC EcSMS35_3994 4073532 - 4072681 - | fructose-bisphosphate aldolase, class II TERM 5331 4074027 - 4073979 - R 70 -7.6 -3.89822 | gap 2 GATTGAGCCGACAAA TTTC-ACGGCTT-CTGGTCCGTAG ACG CCACTGACCAGCAAGCCATCGGAA AACAGCGACATGGTT TERM 5332 4074304 - 4074290 - R 70 -5.7 -4.3534 | GTTTAAGTAGCAAAA TGGTG TAGCC CACCA GGAAACCACCCAACA TERM 5333 4074477 - 4074490 + r 75 -4.5 -5.00884 | CTGATTAAGCATCCA CGGGA TTGT TCCTG TTTTTTCACCAACAT TERM 5334 4074603 - 4074619 + r 87 -5.1 -5.34857 | TAAATGTTTTTTAAT TTCCTGT GAA ACCGGAA TTTTATTTTCTTTCA TERM 5335 4074753 - 4074770 + r 80 -5.5 -5.09259 | CACAATACGTTTATT GGTGAAG CGTT CTTCTCC TTTTATTTTCACATC EcSMS35_3996 4075462 - 4074992 - | PTS system, fructose family, IIA component EcSMS35_3997 4077042 - 4075489 - | putative PTS regulatory protein EcSMS35_3998 4077076 - 4077189 + | hypothetical protein yicI 4079655 - 4077337 - | alpha-xylosidase EcSMS35_4000 4081047 - 4079665 - | sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein TERM 5336 4079849 - 4079862 + g 78 -5.2 -4.83615 | ATGATGCTAATCGTG GCGC TGTTCT GCGC TTTTTCTGCCGCATC TERM 5337 4082384 - 4082368 - g 70 -3.7 -4.61231 | overlap 4082358 GTAGACCTCGAAAAA GGTATAT GGG AGATACC AGCGGAACGTATGAA EcSMS35_4002 4081597 - 4082760 + | phage integrase family site specific recombinase EcSMS35_4003 4082773 - 4085493 + | hypothetical protein TERM 5338 4085530 - 4085549 + T 93 -11.4 -4.28361 | gap 1 CTTTCCCCGCCTCGC CCG-CCCGC TTT GCGGGGCGG TTTTAATGCAGTTGC TERM 5339 4085634 - 4085658 + T 93 -10 -5.08824 | opp_overlap 4085625 4085624 4085634 GAAAACGCATGCAAA GCCATGCACC TTATC GATGCATGGC TTTTTTCAGTAAAAA TERM 5340 4085658 - 4085634 - T 89 -12.2 -3.71148 | opp_overlap 4085634, overlap 4085625 4085624 GAAAACGCATGCAAA GCCATGCACC TTATC GATGCATGGC TTTTTTCAGTAAAAA EcSMS35_4004 4086267 - 4085695 - | phage polarity suppression protein TERM 5341 4086204 - 4086216 + g 70 -4.7 -4.51812 | GCTCATTTTTGCGTT GCAGC CAT GCCGC TTTGTTATTCTGGCA sid 4087258 - 4086524 - | glycoprotein 3, capsid size determination protein Sid TERM 5342 4087110 - 4087121 + g 100 -5.8 -5.56568 | overlap 4087102 4087107 TCGTTTCCGTCGGCC TGCG CCAG CGCA TTTTTTTCCTGCTCT EcSMS35_4006 4087811 - 4088077 + | AlpA family transcriptional regulator TERM 5343 4088206 - 4088220 + F 100 -7.8 -5.71712 | opp_overlap 4088205 TTATCGGCGACATAT GACGCG CCA TGCGTC TTTTTTTGTGTCGCA TERM 5344 4088431 - 4088376 - g 83 -12.6 -3.28712 | gap 1, opp_overlap 4088423, overlap 4088424 GCCGGTTTCCGATAA CGCCGGTATTCTCACCCCCGTCTGG GCTATCG CCAT-CGAGCGTGAGAACTCCGGCG ATAGCGTCATTTACG EcSMS35_4007 4088260 - 4088664 + | phage protein EcSMS35_4008 4088657 - 4088944 + | hypothetical protein EcSMS35_4009 4088937 - 4089392 + | hypothetical protein EcSMS35_4010 4089528 - 4089848 + | hypothetical protein TERM 5345 4090168 - 4090111 - g 93 -12.5 -3.86346 | gap 1 CGACGCGGCCACAAA GGTGGCTGCCGTGACCGGCAG-CCTGCC CCC GGCTGACCCGGCAGTGACGGCCGCCGCC GGTGCTGAAACAGAC TERM 5346 4090683 - 4090673 - g 87 -4.6 -5.252 | overlap 4090674 GACGGCCAGAAAAAA GCCG CCG CAGC CGCAGATGCGTGTGA EcSMS35_4012 4089863 - 4092196 + | D5 family nucleoside triphosphatase EcSMS35_4011 4092267 - 4092151 - | hypothetical protein TERM 5347 4092204 - 4092221 + g 100 -12.7 -5.64274 | CAGCCTGACCCACCT GACCGGC ATCT GCCGGTC TTTTTTTATCCCTGA TERM 5348 4092415 - 4092397 - H 74 -11 -2.77899 | overlap 4092394 TCGGGGGATTAATCA CCGGTATG AGT CACACCGG CAGAATGCCGGAGGT TERM 5349 4092662 - 4092635 - H 71 -2.2 -5.16133 | gap 1, opp_overlap 4092641 4092644, overlap 4092641 4092644 ATTATAATAGAAAAA TATAAACGATTTG AAT CAAATGG-TTATA TGGCAATTTTGACTC EcSMS35_4013 4092783 - 4092929 + | hypothetical protein TERM 5350 4093455 - 4093468 + G 85 -3.1 -5.4505 | GAACTGAAAGCCCGT CCTAT AATG GTAGG TTTTTTCTTCACCGG setC 4093311 - 4094495 + | sugar efflux transporter C TERM 5351 4094534 - 4094520 - f 71 -2 -5.06414 | overlap 4094522 CTGGGCTAAGAAAAA TCGGCG TGG CGCAAA CAGAGCCATCCTCGC TERM 5352 4094978 - 4094990 + G 77 -3.3 -5.10077 | GTACGTAAATCGCGC CCGGG CAT TCTGG TTTTTTGCGCTATTT EcSMS35_4015 4094606 - 4095529 + | carboxylate/amino acid/amine transporter nlpA 4096351 - 4095533 - | lipoprotein NlpA EcSMS35_4017 4096560 - 4096853 + | hypothetical protein EcSMS35_4018 4097155 - 4097652 + | putative type III secretion chaperone SicA EcSMS35_4019 4097662 - 4097844 + | hypothetical protein EcSMS35_4020 4097900 - 4099681 + | putative type III cell invasion protein SipB TERM 5353 4099899 - 4099876 - g 93 -6 -5.30189 | overlap 4099878 TATAATATTAAAAAA TACAGACAGA GAAG TCTGTCCGGA ACTAAGAGTAAAACT TERM 5354 4099897 - 4099878 - g 78 -8.6 -4.26398 | overlap 4099876 TAATATTAAAAAATA CAGACAGA GAAG TCTGTCCG GAACTAAGAGTAAAA TERM 5355 4100225 - 4100199 - g 85 -8.6 -4.52142 | ATCAGAAAACAGAAA CCGTACACGCCA CAA TGGCAAGTTCGG CAGGTGTTCTTGCCG EcSMS35_4021 4099694 - 4100845 + | hypothetical protein EcSMS35_4022 4100889 - 4102238 + | putative type III effector protein SipD TERM 5356 4102546 - 4102534 - g 79 -4.9 -4.89063 | TTATTCAAAAACAAA GAATA TCA TATTC CCCCGAAAGAACTTG EcSMS35_4023 4102441 - 4104138 + | putative transcriptional regulator HilA TERM 5357 4104147 - 4104178 + T 89 -14.6 -2.87354 | opp_overlap 4104148 4104152, overlap 4104152 TGCGTAATAACGAAT ATAAATTGCCCTGC TGAT GCAGGGCAATTTAG TGATTACTTCGTTAA TERM 5358 4104177 - 4104148 - T 100 -18.1 -3.34089 | opp_overlap 4104147 4104152, overlap 4104152 GCGTAATAACGAATA TAAATTGCCCTGC TGAT GCAGGGCAATTTA GTGATTACTTCGTTA TERM 5359 4104152 - 4104173 + T 100 -14.5 -3.86776 | opp_overlap 4104148 4104152, overlap 4104147 AATAACGAATATAAA TTGCCCTGC TGAT GCAGGGCAA TTTAGTGATTACTTC TERM 5360 4104173 - 4104152 - T 100 -14.5 -4.30231 | opp_overlap 4104152 4104147, overlap 4104148 AATAACGAATATAAA TTGCCCTGC TGAT GCAGGGCAA TTTAGTGATTACTTC EcSMS35_4024 4112991 - 4104190 - | putative invasin TERM 5361 4108311 - 4108327 + g 71 -9.4 -3.4252 | GCGTATTCGCCATTG CGCCGT CAGCC ACGGCG TTATCCTGCGTCACC TERM 5362 4110741 - 4110764 + g 74 -7.4 -4.1413 | overlap 4110732 TGGCAACTGCGTTAT TCGCGGTGAT CTGC ATCGCAGCGA TTTTGGCGGTATCTT TERM 5363 4111782 - 4111797 + g 75 -5.4 -4.62783 | gap 1 GTCGTGCTGCAACTT CAGC-CG GAT CGAGCTG TTTTTGCAGTGAATG nepI 4114378 - 4113194 - | purine ribonucleoside efflux pump NepI TERM 5364 4113957 - 4113922 - G 72 -6.8 -4.20368 | gap 1, overlap 4113907 4113934 4113937 CCAGCGCAATAGAAA CCGCGCCGAAGATCACC GAC AGCG-CCTTCGGCACCG TACGCGGCGGTACCA TERM 5365 4114180 - 4114164 - G 75 -5.1 -4.67607 | overlap 4114165 TGGGTAATAAACAAA CTGGCAA ACA TTGCCAC AAAGGCGGTCACGGT TERM 5366 4114345 - 4114355 + g 77 -8.2 -4.09864 | opp_overlap 4114344 GTCGGGTGATGACAT CCGC GCC GCGG TTTTCGGCAATAAAT EcSMS35_4026 4114612 - 4114965 + | hypothetical protein EcSMS35_4027 4114949 - 4115272 + | putative DNA-binding protein EcSMS35_4028 4115840 - 4115388 - | hypothetical protein EcSMS35_4029 4117239 - 4115893 - | sulfate permease family inorganic anion transporter TERM 5367 4116714 - 4116736 + g 83 -5.6 -5.16237 | opp_overlap 4116689 TCACCAGGGTGTCTT TATTGGCG ACAATAA CGCCAGTA TTTTTTAATCCCATT TERM 5368 4117423 - 4117401 - H 73 -2.8 -5.09245 | TCAAAATGAGAAAAA TATGAATAAT TCT ATTAACCATA AATTTCATCACATTA ade 4117402 - 4119168 + | adenine deaminase TERM 5369 4119196 - 4119178 - T 100 -13.1 -6.22691 | GAATAATAAAAAAAA GCCCGGC GTCAT GCCGGGC AAAAGTCACCAGTTA uhpT 4120606 - 4119215 - | hexose phosphate transport protein TERM 5370 4120567 - 4120589 + g 71 -9.1 -3.53012 | CTTCGAGCGGAAGGT CCAGGGTCG GCTTG CGAACCTGG TTTAAGAAAGCCAGC uhpC 4122063 - 4120744 - | regulatory protein UhpC TERM 5371 4121026 - 4121014 - G 73 -9.1 -3.65581 | ACCAATGGTGAAGAA GCAGG TTG CCTGC ATCACGTAGCTGGCA TERM 5372 4121689 - 4121677 - G 72 -5.5 -4.57569 | CCAGCCCTGGAAAAA GGCGT TCA ACACC CAGAGCACGGCAAAC uhpB 4123575 - 4122073 - | sensor histidine kinase UhpB uhpA 4124165 - 4123575 - | transcriptional regulatory protein UhpA TERM 5373 4124214 - 4124190 - R 91 -7.8 -5.24129 | opp_overlap 4124190 4124189 CTGGCGGATAAAAAA CGCGCATACC TTAAC GATAAGCGCG ATGTTGTTCAAGTTG TERM 5374 4124269 - 4124306 + r 100 -15.1 -3.38812 | gap 1, opp_overlap 4124277, overlap 4124277 TGATGTTGGTCTTAT CGT-CAAAACGCTTACCT GAA AGGTAAGCGTTTGGTACG TGTTATTGCGAAAAA TERM 5375 4124297 - 4124277 - R 100 -14.1 -4.11216 | opp_overlap 4124269 4124277 GTCTTATCGTCAAAA CGCTTACCT GAA AGGTAAGCG TTTGGTACGTGTTAT TERM 5376 4124277 - 4124297 + r 100 -14.1 -3.79882 | opp_overlap 4124277, overlap 4124269 GTCTTATCGTCAAAA CGCTTACCT GAA AGGTAAGCG TTTGGTACGTGTTAT EcSMS35_4035 4125829 - 4124327 - | hypothetical protein TERM 5377 4124863 - 4124887 + g 75 -7.3 -4.37886 | opp_overlap 4124869, overlap 4124869 TAAATACAATTTCAC TAAAAAGCTTT TCG AAAGCTTTATA TTTTCTAACACCTCC TERM 5378 4124869 - 4124881 + g 74 -6.3 -4.51238 | opp_overlap 4124869, overlap 4124863 CAATTTCACTAAAAA GCTTT TCG AAAGC TTTATATTTTCTAAC TERM 5379 4124881 - 4124869 - G 81 -6.3 -4.74801 | opp_overlap 4124869 4124863 CAATTTCACTAAAAA GCTTT TCG AAAGC TTTATATTTTCTAAC TERM 5380 4124901 - 4124922 + g 81 -7.3 -4.71426 | TATTTTCTAACACCT CCATGGC CAGACAAA GCCATGG TTTTATTCCTCAGAA EcSMS35_4036 4127340 - 4126045 - | hypothetical protein TERM 5381 4126320 - 4126310 - G 70 -5.4 -4.39989 | overlap 4126304 ATGAAACTATCAAAA CTCT TTG AGAG TAACTCGCGAACATC TERM 5382 4127501 - 4127527 + r 100 -13.8 -3.60502 | opp_overlap 4127501 TTCAGGGCTAATAAA TTGTGCCTGAGA TGG TCTCTGGCACAA TTTCACCCTATATAT TERM 5383 4127527 - 4127501 - R 100 -13.8 -4.16842 | opp_overlap 4127501 TTCAGGGCTAATAAA TTGTGCCTGAGA TGG TCTCTGGCACAA TTTCACCCTATATAT ilvN 4127893 - 4127603 - | acetolactate synthase, isozyme I, small subunit TERM 5384 4127734 - 4127745 + g 74 -5.8 -4.45485 | overlap 4127741 CGTCATTGACCAGTA GCCA GATG TGGC TTTTGTCGCTGTCCT ilvB 4129585 - 4127897 - | acetolactate synthase, large subunit, isozyme I TERM 5385 4129663 - 4129639 - H 100 -10.7 -4.98531 | gap 1, opp_overlap 4129616 4129639 TGCTTAAACGAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG TERM 5386 4129639 - 4129663 + H 93 -11.4 -4.16279 | gap 1, opp_overlap 4129639, overlap 4129616 TGCTTAAACGAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 5387 4129940 - 4129925 - H 95 -8.2 -5.4505 | opp_overlap 4129925 GCGGGTAACAAAAAA CCCCGC CGGA GCGAGG TTTCGTCAGTCGCCT TERM 5388 4130466 - 4130487 + H 100 -17.3 -4.00934 | opp_overlap 4130466 TCAAGTCGCACCAAA GGGGAGCGG GTAA CCGCTCCCC TTTCATATTTAGCGT TERM 5389 4130487 - 4130466 - H 100 -17.3 -3.74747 | opp_overlap 4130466 TCAAGTCGCACCAAA GGGGAGCGG GTAA CCGCTCCCC TTTCATATTTAGCGT TERM 5390 4130557 - 4130576 + H 72 -3.5 -4.93288 | overlap 4130558 GCCCTACCATCCCTC CCGGCAA CATTTA TTGCCGC TTTTGTTTACATATT TERM 5391 4131471 - 4131490 + G 80 -5.6 -5.02074 | overlap 4131472 4131473 TCAGTATTTTGTTTA TTCTGCCG ATTC CGGCAGCG TTTTTTGGCGCATGG emrD 4130723 - 4131907 + | multidrug resistance protein D EcSMS35_4040 4132412 - 4131915 - | hypothetical protein TERM 5392 4132344 - 4132330 - G 73 -4.2 -4.86033 | opp_overlap 4132334 4132336 AAATTGTGATAAAAA TCGGCA GGT TGCAGA GCATCCTTGTACTCT EcSMS35_4041 4132771 - 4132409 - | hypothetical protein EcSMS35_4042 4133108 - 4132761 - | hypothetical protein TERM 5393 4133157 - 4133125 - R 81 -10.6 -3.53012 | GTTGCTCCTTGTAAA CTGTTCCTCGCCGA AAAAG TAGGCCAGGAACAG CAATAATGCATCAGA TERM 5394 4133169 - 4133179 + r 93 -5.4 -5.47159 | ACAGCAATAATGCAT CAGA ACT TCTG TTTTTTCTCTTCCAC EcSMS35_4043 4134661 - 4133168 - | sulfatase EcSMS35_4044 4136373 - 4134658 - | solute/sodium symporter (SSS) family protein TERM 5395 4135402 - 4135382 - G 70 -6.1 -4.15222 | overlap 4135383 4135386 ACCGCGCCGAAGAAA CCCACCAGT GGC ACTGGCAGA ACGTTATTGACCAGC TERM 5396 4137426 - 4137394 - g 85 -11.3 -3.61517 | overlap 4137396 4137397 AGCTGTGCTGAAGAA TACGGACCAGCACCC AAC GGATGCCAGTCCACA CAATTAACGTAACTC TERM 5397 4137424 - 4137396 - g 80 -11.7 -3.38812 | overlap 4137394 4137397 CTGTGCTGAAGAATA CGGACCAGCACCC AAC GGATGCCAGTCCA CACAATTAACGTAAC TERM 5398 4137423 - 4137397 - g 81 -13 -2.63073 | overlap 4137396 4137394 TGTGCTGAAGAATAC GGACCAGCACCC AAC GGATGCCAGTCC ACACAATTAACGTAA EcSMS35_4046 4136540 - 4137433 + | AraC family transcriptional regulator glvA 4138752 - 4137430 - | maltose-6'-phosphate glucosidase EcSMS35_4047 4140368 - 4138752 - | PTS system, alpha-glucoside-specific IIBC component TERM 5399 4139061 - 4139072 + g 70 -5.8 -4.22041 | TGCCGCGGTGGTTTG GCCT CGCG AGGC TTTGTATTCGGCTTT TERM 5400 4139508 - 4139498 - G 75 -6.8 -4.43208 | ACATCGCTAAAGAAA TGCC CAC GGCA CCAAAGATTTTTGAG TERM 5401 4140575 - 4140593 + H 83 -6.1 -5.10497 | opp_overlap 4140575 4140573 ACACAGCAACGAACA CATCTTT AAAAA AAAGATG TTTTTTCAATCGATT TERM 5402 4140907 - 4140884 - g 76 -9.5 -3.74872 | ATGTATTGCATCAAA CCGCCAGCC TGACCG GGCTGGTGG AGGTGTTAAAACGGC TERM 5403 4141369 - 4141335 - g 75 -11.5 -3.10071 | gap 1, opp_overlap 4141338 AAATGCCAGCGAATA CCAGGTGGAGT-ACCA TTTA CGGCGACTCCACCCGG AGAAGAGTTAACCGA EcSMS35_4049 4140664 - 4141380 + | GntR family transcriptional regulator EcSMS35_4048 4143038 - 4141377 - | hypothetical protein TERM 5404 4143218 - 4143198 - g 100 -14.7 -5.9667 | AAAAAGACAAAAAAA GCCCCACCA GAA TGGCGGGGC AAAGAGAATAGCTAG EcSMS35_4050 4143080 - 4143229 + | hypothetical protein ibpB 4143662 - 4143234 - | small heat shock protein IbpB TERM 5405 4143387 - 4143416 + g 88 -2.1 -5.57729 | opp_overlap 4143387 4143388, overlap 4143377 AAAGCTCAGGCTAAA TGGCTGATTCA TAAGCCCT TGATGCAGCCA TTTTTTCTCTTCTTT ibpA 4144187 - 4143774 - | small heat shock protein IbpA EcSMS35_4053 4144565 - 4144825 + | hypothetical protein EcSMS35_4054 4146041 - 4144827 - | hypothetical protein TERM 5406 4145269 - 4145230 - G 72 -8.4 -3.71649 | gap 1, opp_overlap 4145233 TGGGTAAAGGTTAAA CGTCGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGGTTG TTTCCGTTCCACTTA TERM 5407 4145233 - 4145266 + g 100 -13.1 -4.0098 | gap 1, opp_overlap 4145230 GTAAAGGTTAAACGT CGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGG TTGTTTCCGTTCCAC TERM 5408 4145513 - 4145523 + g 70 -4.6 -4.4715 | TACCGCTGTATTCAC GCGG ATG CTGC TTTTGTACGTTGACC TERM 5409 4145668 - 4145698 + g 90 -14.6 -2.66912 | opp_overlap 4145654, overlap 4145659 TGCACATGGCTGCCG CCGCGCAGTGCTCC TGG GGTGTACGGCGCGG TAATATCCATTGCAT TERM 5410 4146257 - 4146243 - g 81 -6.4 -4.82901 | overlap 4146246 4146247 CGCGCTGGATAAAAA GCACCA GTG TGGTAC TGAAGGTTTCAGCAA TERM 5411 4147017 - 4147031 + G 70 -10 -3.20348 | overlap 4147002 4147001 CTATGCGCTGGATAG CGCAGA GAT TCTGCG TTCGGTGTTACTGAA TERM 5412 4147148 - 4147127 - g 82 -9.4 -4.28375 | opp_overlap 4147127 GCAAGATAGTCAAAA GCCGATGC CTGACC GCACCGGC TTTAAGAAAGTGGAT TERM 5413 4147192 - 4147158 - g 85 -10.1 -4.15222 | opp_overlap 4147166 ACCGGCTTTAAGAAA GTGGATTATGCGC AGTGGTGTG GCGCATATTCCAC AGTTGAAAGATTAGC EcSMS35_4056 4146121 - 4147206 + | hypothetical protein EcSMS35_4055 4148495 - 4147203 - | d-galactonate transporter TERM 5414 4147735 - 4147725 - G 77 -3.2 -5.08601 | overlap 4147713 CCAGGTTAAGAAAAA CCAC AGT GTAG AAGCCACCGCAAATT EcSMS35_4057 4149763 - 4148615 - | mandelate racemase/muconate lactonizing enzyme family protein EcSMS35_4058 4150377 - 4149760 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase-like protein TERM 5415 4149939 - 4149951 + g 82 -9.1 -4.17491 | AGACCGGGATGTCCT GCGGT AAT ACCGC TTTTAACGCTTTGAT dgoK_1 4151239 - 4150361 - | 2-dehydro-3-deoxygalactonokinase dgoR_1 4151925 - 4151236 - | galactonate operon transcriptional repressor EcSMS35_4061 4152204 - 4152860 + | putative lipoprotein yidA 4153716 - 4152904 - | phosphatase yidA TERM 5416 4153624 - 4153636 + g 72 -5.5 -4.56775 | GCCACGGGCGCGAGC TGCGG CAA TCGCA TTTTTAACGGCGGGT EcSMS35_4063 4154229 - 4153831 - | hypothetical protein TERM 5417 4154332 - 4154312 - R 100 -16.9 -5.38054 | TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC GGACTGACGACTAAG gyrB 4156787 - 4154373 - | DNA gyrase, B subunit TERM 5418 4155555 - 4155569 + g 74 -10 -3.53012 | CGCCGGATCGCGTTC CTGGCA GTC TGCCAG TTTGCCCGGCAGGCC TERM 5419 4156377 - 4156400 + g 77 -6.6 -4.56597 | ACGGTGAATTTTACC CTCGCGCTGG ATAA CCAGCTCCAG TTTTTGCGACAGGGC recF 4157889 - 4156816 - | DNA replication and repair protein RecF TERM 5420 4157331 - 4157371 + g 70 -10.3 -3.1372 | overlap 4157329 GCCAGGTGCTGATTT GCTCCGCCAGCGGGATCAG TTC TTTATCCCACGGGCGTAGC TGTTCGTAACGAGTC TERM 5421 4157756 - 4157737 - G 73 -9.2 -3.63968 | overlap 4157730 CTGCAAACTGCGAAA CGCCCGAC CATG GCCGAGCG TATAGATGGCTTCCA dnaN 4158989 - 4157889 - | DNA polymerase III, beta subunit dnaA 4160397 - 4158994 - | chromosomal replication initiator protein DnaA TERM 5422 4159922 - 4159962 + g 72 -8.3 -3.75153 | gap 1, opp_overlap 4159910 4159907, overlap 4159926 4159930 GCACCGCCAGGGTTA TCT-GCCACCTGGCGAGC CGCCGC GCGCGCCAGTTGGTTAGA TTTACCTTCAACGAA TERM 5423 4159926 - 4159957 + g 80 -11.5 -3.30781 | opp_overlap 4159910 4159907, overlap 4159922 4159930 CGCCAGGGTTATCTG CCACCTGGCGAGC CGCCGC GCGCGCCAGTTGG TTAGATTTACCTTCA TERM 5424 4159930 - 4159953 + g 71 -9.5 -3.43217 | opp_overlap 4159910 4159907, overlap 4159926 4159922 AGGGTTATCTGCCAC CTGGCGAGC CGCCGC GCGCGCCAG TTGGTTAGATTTACC TERM 5425 4160068 - 4160087 + g 74 -10 -3.54129 | gap 1, opp_overlap 4160067 4160066, overlap 4160086 CGAGCGCGTAGAAGG CGCAGCACG TTG CG-GCTGCG TTTGCGCCACCTGTG EcSMS35_4068 4160891 - 4160691 - | hypothetical protein EcSMS35_4069 4161051 - 4160911 - | hypothetical protein rpmH 4161004 - 4161144 + | ribosomal protein L34 TERM 5426 4161345 - 4161325 - g 74 -2.6 -5.06816 | gap 1 AGTCGCCAAGAAAAA CGTTCGACG CGCC CAT-GAACG CAATCGGATTAAACG rnpA 4161161 - 4161520 + | ribonuclease P protein component EcSMS35_4072 4161744 - 4163390 + | inner membrane protein OxaA TERM 5427 4163434 - 4163415 - f 82 -9.2 -4.17048 | opp_overlap 4163416, overlap 4163416 TTTTCGCTAAAATAA GGGCGGTC AGTT GACCGCCT TTTTTCTTTTCGTAG TERM 5428 4163433 - 4163416 - f 83 -12.7 -3.09908 | opp_overlap 4163416, overlap 4163415 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5429 4163416 - 4163433 + F 100 -12.7 -5.83211 | opp_overlap 4163416 4163415 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5430 4164518 - 4164504 - g 76 -7.8 -4.15044 | GTGGTGCGCAATAAA GCCGAT ATC ACCGGC GAAACGTTGGGGATG trmE 4163496 - 4164860 + | tRNA modification GTPase TrmE TERM 5431 4164869 - 4164904 + F 88 -12 -3.53712 | gap 1, opp_overlap 4164861 4164874, overlap 4164868 4164870 4164892 TAAGTAACTGCGCTT ACGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCGC TTCATTGTTAGCACT TERM 5432 4164870 - 4164903 + F 93 -15.5 -2.71745 | gap 1, opp_overlap 4164861 4164874, overlap 4164868 4164869 4164892 AAGTAACTGCGCTTA CGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCG CTTCATTGTTAGCAC tnaC 4165102 - 4165176 + | tryptophanase leader peptide TERM 5433 4166046 - 4166030 - g 78 -8 -4.35524 | CTGGCAAACTTAAAA GCGATG TACAG CATCGC GAAGAAATACGATAT tnaA 4165397 - 4166812 + | tryptophanase TERM 5434 4167006 - 4167016 + F 73 -4.6 -4.85599 | TACCTGTTGATCTTG CCGG TGC CTGG TTTTTCTGGGGTGCC TERM 5435 4168160 - 4168183 + F 83 -12.5 -3.12351 | opp_overlap 4168143 4168163, overlap 4168163 GGCTGATCCCTTCAA GAAGCCAGC CATTTC GCTGGCTTC TTGCCTGTCAGGAAA TERM 5436 4168163 - 4168180 + F 72 -8.4 -3.70773 | opp_overlap 4168143 4168163, overlap 4168160 TGATCCCTTCAAGAA GCCAGC CATTTC GCTGGC TTCTTGCCTGTCAGG TERM 5437 4168180 - 4168163 - f 72 -8.4 -3.62046 | opp_overlap 4168163 4168160, overlap 4168143 TGATCCCTTCAAGAA GCCAGC CATTTC GCTGGC TTCTTGCCTGTCAGG TERM 5438 4168361 - 4168399 + GF 72 -9.4 -3.20236 | overlap 4168395 TACCTCGTTGGTTTA CCGCGCATCGCTGCCGAT CTC AATGCCAGCGAAGCGCAG TTGCATATTGCGTTC TERM 5439 4168830 - 4168844 + GF 77 -11.4 -2.57132 | opp_overlap 4168825, overlap 4168829 TAAAAGAAACGCGCC CTGCGG CCC CCGCAG CTTCTGACAAACCAC TERM 5440 4169098 - 4169110 + GF 71 -7.7 -3.71848 | ACGTACGTTGATGAT CACCT CAC AGGTG TTATTCCTGGCGGCG mdtL 4168283 - 4169458 + | multidrug resistance protein MdtL EcSMS35_4078 4169433 - 4170392 + | LysR family transcriptional regulator EcSMS35_4079 4170549 - 4171298 + | hypothetical protein TERM 5441 4171712 - 4171722 + G 72 -6.8 -4.2828 | TCAGTATCACCTGCG CCAG ATT CTGG TTTTCCTCGATGCAA EcSMS35_4080 4171320 - 4171886 + | NADPH-dependent FMN reductase TERM 5442 4171919 - 4171895 - T 100 -12.2 -5.65927 | gap 1, opp_overlap 4171895 4171911 4171913 GATCTAAATAAAAAA CCCGCCA-GCA ATCA TGCATGGCGGG TTTTTAACGCGCTAT TERM 5443 4171895 - 4171919 + T 100 -12.2 -4.57837 | gap 1, opp_overlap 4171895, overlap 4171911 4171913 GATCTAAATAAAAAA CCCGCCA-GCA ATCA TGCATGGCGGG TTTTTAACGCGCTAT EcSMS35_4081 4173277 - 4171940 - | sulfate permease family inorganic anion transporter TERM 5444 4173156 - 4173142 - G 83 -5.7 -5.06414 | GCGGGTTAACAAAAA CGATG TAAAC CATCG TCAGGAAGGTGGTAA TERM 5445 4173430 - 4173418 - H 73 -6.3 -4.30576 | TTGGCATGACGAAAA CGTTA AAC TAACG ATAAAGGAAAGACAT EcSMS35_4082 4173444 - 4174109 + | HAD family hydrolase EcSMS35_4083 4176654 - 4174246 - | hypothetical protein TERM 5446 4176801 - 4176820 + r 71 -7.8 -3.8374 | opp_overlap 4176805, overlap 4176802 TTATTTCCATTTTAA CCCAGGGT GTTC ACCCTGGA TTTGCAATTTTTTGG TERM 5447 4176802 - 4176819 + r 78 -11.3 -2.8916 | opp_overlap 4176805, overlap 4176801 TATTTCCATTTTAAC CCAGGGT GTTC ACCCTGG ATTTGCAATTTTTTG EcSMS35_4084 4176899 - 4176786 - | hypothetical protein TERM 5448 4177333 - 4177343 + G 76 -4 -5.0133 | ACTGATGAACAGATC GAAA ATA TTTC TTTTTTAAACGCATA TERM 5449 4177738 - 4177716 - g 88 -12.2 -3.7108 | opp_overlap 4177715 4177713 4177716 4177718 ATTTTCACATGCAAA CATGAAATGT TCG ACATTTCATG ATATTAATTTTGATA TERM 5450 4177716 - 4177738 + G 76 -12.2 -2.65404 | opp_overlap 4177716, overlap 4177715 4177713 4177718 ATTTTCACATGCAAA CATGAAATGT TCG ACATTTCATG ATATTAATTTTGATA EcSMS35_4085 4176955 - 4178142 + | hypothetical protein EcSMS35_4086 4181101 - 4178612 - | hypothetical protein TERM 5451 4179132 - 4179143 + g 82 -3 -5.31072 | opp_overlap 4179132 ATTTTATCAAAACTA TCAT CTTT ATGA TTTTTATTATATTCT TERM 5452 4179198 - 4179234 + g 75 -5.3 -4.7078 | opp_overlap 4179204, overlap 4179202 4179203 4179204 AAATCAAAGTGGAAG TGAAATGTTTTGCTGTT TGA AATAGCAGAACGATTTA TTTTTAAATAGTTAC TERM 5453 4179202 - 4179230 + g 76 -3.9 -4.89063 | opp_overlap 4179204, overlap 4179198 4179203 4179204 CAAAGTGGAAGTGAA ATGTTTTGCTGTT TGA AATAGCAGAACGA TTTATTTTTAAATAG TERM 5454 4180395 - 4180405 + g 83 -5.4 -5.09426 | opp_overlap 4180400, overlap 4180399 4180400 TAAGATATAGCACCA GTGA ATG TCAC TTTTTTAAAGTTACA EcSMS35_4087 4181374 - 4181261 - | hypothetical protein phoU 4182253 - 4181528 - | phosphate transport system regulatory protein PhoU pstB 4183041 - 4182268 - | phosphate ABC transporter, ATP-binding protein pstA 4184021 - 4183131 - | phosphate ABC transporter, permease protein PstA pstC 4184980 - 4184021 - | phosphate ABC transporter, permease protein PstC pstS 4186107 - 4185067 - | phosphate ABC transporter, periplasmic phosphate-binding protein PstS TERM 5455 4186319 - 4186349 + r 71 -8.3 -3.53031 | opp_overlap 4186320 4186326, overlap 4186315 4186320 ACAAAAATGCGTAAG ATGACAACGGTGT GAGGA ACACCGCTGTCAG TTCGTTTAGCGTACA TERM 5456 4186348 - 4186320 - R 87 -14 -3.10589 | opp_overlap 4186319 4186315 4186320, overlap 4186326 CAAAAATGCGTAAGA TGACAACGGTGT GAGGA ACACCGCTGTCA GTTCGTTTAGCGTAC TERM 5457 4186320 - 4186348 + r 79 -11.8 -2.71497 | opp_overlap 4186320 4186326, overlap 4186319 4186315 CAAAAATGCGTAAGA TGACAACGGTGT GAGGA ACACCGCTGTCA GTTCGTTTAGCGTAC lpfD 4187425 - 4186355 - | long polar fimbrial operon protein LpfD TERM 5458 4186624 - 4186640 + g 72 -8.1 -3.95022 | opp_overlap 4186623 TAGCATAAAAAGAGG TACTGAT ATC ATCAGTA TTTAGTATTCCTAAA lpfC 4189958 - 4187436 - | long polar fimbrial operon protein LpfC lpfB 4190714 - 4189983 - | long polar fimbrial operon protein LpfB lpfA 4191334 - 4190762 - | long polar fimbrial operon protein LpfA TERM 5459 4191621 - 4191602 - R 100 -12.8 -5.64274 | opp_overlap 4191602 TCACTTATAAAAAAA GGGCCGCC GGTC GGCAGCCC TTTTCTATCAACGAG TERM 5460 4191602 - 4191621 + r 93 -10.6 -4.52589 | opp_overlap 4191602 TCACTTATAAAAAAA GGGCCGCC GGTC GGCAGCCC TTTTCTATCAACGAG glmS 4193471 - 4191642 - | glutamine-fructose-6-phosphate transaminase (isomerizing) TERM 5461 4192660 - 4192674 + g 75 -4.9 -4.75404 | opp_overlap 4192643 TGACCGTGACTGATG CGCCC GGTAA GGGTG TTTTTGATCGCGTTT glmU 4195003 - 4193633 - | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase TERM 5462 4194241 - 4194228 - G 70 -5.2 -4.34402 | overlap 4194229 CCGCGCAGATCAAAA CGCG CCGGAT CGCG CAGCATAACGCCTGC TERM 5463 4194253 - 4194265 + g 84 -7.7 -4.62302 | CGCGCAGCATAACGC CTGCT AAC AGCAG TTTTTCAGCCTGTTC TERM 5464 4195303 - 4195334 + r 73 -10.2 -3.08032 | opp_overlap 4195308, overlap 4195308 ACGGGTCACGCGTAA AAAAAGCCAGCCTG TTTC CAGACTGGCTTTTG TGCTTTTCAAGCCGG TERM 5465 4195329 - 4195308 - R 100 -12.3 -5.42259 | opp_overlap 4195303 4195308 TCACGCGTAAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA TERM 5466 4195308 - 4195329 + r 91 -10.1 -4.67635 | opp_overlap 4195308, overlap 4195303 TCACGCGTAAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA atpC 4195771 - 4195352 - | ATP synthase F1, epsilon subunit atpD 4197174 - 4195792 - | ATP synthase F1, beta subunit TERM 5467 4196941 - 4196964 + g 76 -7.4 -4.18018 | CGCTTTACCTACCGG GACTTCGATC GGGT GTTCGAGGTC TTTTACATCCAGACC TERM 5468 4197218 - 4197232 + r 70 -10 -2.57244 | opp_overlap 4197207 4197206, overlap 4197215 AAACCGCGGCGGCCC CCGAGA CGA TCTCGG TGAGTTCCTGAGTAA atpG 4198064 - 4197201 - | ATP synthase F1, gamma subunit TERM 5469 4197889 - 4197922 + g 100 -14.7 -3.91897 | opp_overlap 4197889 TTATATTCCAGATTA CCGTGTGCAAGGTGA CCAA TCACTTTGCGCATGG TTTCTGCATAAGGAC atpA 4199656 - 4198115 - | ATP synthase F1, alpha subunit TERM 5470 4199094 - 4199130 + g 77 -8.7 -4.13014 | overlap 4199095 CATTTGATACCGGAA TCGCGCTGGTTGATGAT GGC ATCGATAGCCAGTGCGG TTTTACCGGTCTGAC atpH 4200202 - 4199669 - | ATP synthase F1, delta subunit TERM 5471 4200028 - 4200072 + g 72 -5.1 -4.50686 | gap 3, opp_overlap 4200023 4200026, overlap 4200023 4200029 CTGCGATAAACGACT CGGC-GAGCGT-T-TCTGGCGC AAGC GCGCCAGAGAGAAGCTCTGCCA TTTGTTCGTTTTTGG atpF 4200687 - 4200217 - | ATP synthase F0, B subunit TERM 5472 4200561 - 4200582 + g 70 -3.7 -4.67353 | CTGCGGAAGCAAGGC CGTCAGCAA TTTC TTTTTGACG TTTTTCGATGGCTGC TERM 5473 4200588 - 4200616 + g 73 -11.8 -2.77899 | gap 1, overlap 4200585 CTTTTTGACGTTTTT CG-ATGGCTGCCA TTAA TGGCGGCCATACG TACTTCATGCAGAAC atpE 4200988 - 4200749 - | ATP synthase F0, C subunit atpB 4201850 - 4201035 - | ATP synthase F0, A subunit TERM 5474 4201537 - 4201517 - G 74 -11.1 -3.17051 | overlap 4201515 GGTTCATCAGGAATA CCCAGACGA AGA TCGTCAGGG CCAGCGGAGCAATCA atpI 4202077 - 4201859 - | ATP synthase F0, I subunit TERM 5475 4202041 - 4202013 - G 70 -10.9 -2.7264 | opp_overlap 4202013 4202024 4202030, overlap 4202002 4202012 AAAGCTTCGCCAAAT GCGAATGTCCAGG CCA CCCGGCCTTTCGC TGGTGTATGCGCCTG TERM 5476 4202768 - 4202731 - R 100 -9.3 -5.52384 | gap 1, opp_overlap 4202730, overlap 4202759 TGCTTACCAAAAAAA GCCACGTT-ACTTTGTTG ATG CAAAAGAGTGAACGTGGC GTTAAATGTAACCAG gidB 4203479 - 4202856 - | methyltransferase GidB TERM 5477 4203504 - 4203531 + r 100 -18.6 -4.77759 | overlap 4203528 4203529 CTGTTCTTGATGCGT TGCCTGGTAAGC GGGT GCTTACCAGGCA TTTTTAATGCGTTAT gidA 4205432 - 4203543 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA mioC 4206254 - 4205811 - | MioC protein asnC 4206802 - 4206344 - | regulatory protein AsnC TERM 5478 4206866 - 4206876 + H 74 -3.2 -5.10461 | overlap 4206860 TTTAATGAATCAAAA GTCA CTA TGGC TTTTTATTGAATGAA TERM 5479 4207263 - 4207208 - g 95 -15.7 -2.75252 | gap 2 ATTAGGGCAACACGA CTTCAGTGCGGGCGAAGGGCTTTACAC GCAC ATG-AAAGCCCTTCGCCC-CGATGAAG ACCGTCTTTCTCCGT asnA 4206954 - 4207946 + | aspartate--ammonia ligase EcSMS35_4113 4209402 - 4207951 - | ViaA family protein TERM 5480 4209036 - 4209024 - G 75 -4.8 -4.84017 | AACGCTGGAGAAAAA GCGT GTGTA ACGC TGAAGTGATCGTGCT EcSMS35_4114 4210892 - 4209396 - | ATPase TERM 5481 4211043 - 4211057 + H 79 -4.2 -5.24129 | overlap 4211042 ATTTTGCCGTTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5482 4211244 - 4211267 + G 76 -3.8 -4.88736 | overlap 4211241 4211240 CAGTTTGGTTTTGGC GTTGAACGCG ATGC CGTGTTTGGC TTTTTATCGCTGATC TERM 5483 4211606 - 4211592 - g 70 -4.2 -4.68593 | TTTATGATTCAAAAA CATGGC ACG GCTATG GTCGGTAAGCTGTTT kup 4211115 - 4212983 + | potassium uptake protein TERM 5484 4212991 - 4213015 + F 100 -9.3 -5.50723 | AAATCTAACGCCAGA CGCCTCCTT TCTCCAT AAGGGGGCG TTTTTGTTTTCATGG TERM 5485 4213508 - 4213538 + G 75 -11.3 -3.00907 | gap 1, overlap 4213502 4213517 4213536 AAAGTCAGGCGGTAA TTCGCA-GCGGAGA ATGT TCTCCGTATGCGAA TATCATTCTCTGTGC rbsD 4213138 - 4213569 + | cytoplasmic D-ribose-binding protein RbsD TERM 5486 4213642 - 4213631 - g 70 -7.2 -4.07568 | TTCCCGGGCGTAAAA GCCC TCTC GGGC GCAGCGTTAAATGTC rbsA 4213577 - 4215082 + | ribose ABC transporter, ATP-binding protein rbsC 4215087 - 4216052 + | ribose ABC transporter, permease protein rbsB 4216077 - 4216967 + | ribose ABC transporter, periplasmic ribose-binding protein TERM 5487 4217049 - 4217073 + F 86 -9.9 -4.38712 | opp_overlap 4217045 4217042, overlap 4217050 AAGAAAAGCAGGGCA CGCGCCACCCT AAC ACGGTGGCGCA TTTTATGGACATCCC TERM 5488 4217050 - 4217072 + F 91 -13.4 -3.22906 | opp_overlap 4217045 4217042, overlap 4217049 AGAAAAGCAGGGCAC GCGCCACCCT AAC ACGGTGGCGC ATTTTATGGACATCC rbsK 4217078 - 4218022 + | ribokinase TERM 5489 4218046 - 4218062 + G 90 -11.5 -3.91897 | opp_overlap 4218044, overlap 4218047 TACAATGAAAGATGT TGCCCGC CTG GCGGGCG TTTCTACCTCAACAG TERM 5490 4218047 - 4218061 + G 78 -12.8 -2.94924 | opp_overlap 4218044, overlap 4218046 ACAATGAAAGATGTT GCCCGC CTG GCGGGC GTTTCTACCTCAACA rbsR 4218026 - 4219018 + | ribose operon repressor EcSMS35_4121 4220411 - 4218984 - | DHA2 family drug:H+ antiporter-1 EcSMS35_4123 4221126 - 4220434 - | GntR family transcriptional regulator TERM 5491 4223213 - 4223200 - R 74 -6.7 -4.41177 | overlap 4223204 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5492 4223439 - 4223415 - R 72 -8 -3.93061 | gap 1, opp_overlap 4223422 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5493 4223984 - 4223972 - R 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5494 4225287 - 4225276 - R 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5495 4226477 - 4226456 - R 76 -8.7 -3.95449 | opp_overlap 4226473 TGATAACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAACAGAATTTGCC TERM 5496 4226829 - 4226848 + r 100 -10.8 -6.02914 | opp_overlap 4226826 4226829 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA TERM 5497 4226848 - 4226829 - R 76 -10.8 -3.00946 | opp_overlap 4226829, overlap 4226826 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA hdfR 4227755 - 4226916 - | transcriptional regulator HdfR TERM 5498 4227113 - 4227130 + g 72 -9.9 -3.31144 | CAATCTGTTGCTGTG CCAGTTC AGCA GAACTGG TTGTCAGAATGGGAA EcSMS35_4132 4227874 - 4228212 + | hypothetical protein TERM 5499 4228219 - 4228231 + T 100 -6.9 -5.72616 | opp_overlap 4228213 4228219 GACGATTAATAAAAA GGGCG AAA TGCCC TTTTTTTATGTCAGT TERM 5500 4228231 - 4228219 - T 83 -6.2 -5.15167 | opp_overlap 4228219, overlap 4228213 GACGATTAATAAAAA GGGC GAAAT GCCC TTTTTTTATGTCAGT EcSMS35_4133 4229757 - 4228237 - | AAA family ATPase TERM 5501 4228542 - 4228571 + g 72 -7.1 -4.26076 | opp_overlap 4228532, overlap 4228525 TTACACGTTGTTTAA CGGTGGTGCTG TTTTCTCC CTGCACTACCG TTTTACTCAAAATGC TERM 5502 4229129 - 4229141 + g 71 -10.5 -2.93089 | overlap 4229126 AGTAAAAGGTTGTGC CCGCC AGC GGCGG TAATTTCCAGTCCTC TERM 5503 4229610 - 4229625 + g 70 -6 -4.22535 | opp_overlap 4229602 TGATAATGGCGCTGC GCACGC GATC GCGGGC TTCTTTTACCGTTGT TERM 5504 4230009 - 4229986 - H 74 -4 -5.00616 | opp_overlap 4229992 TTTCTTTTTAAAAAA CAACAATTTC TCTT GAAATTATTA AAGACATCATAAAAA TERM 5505 4230258 - 4230231 - H 85 -11.2 -3.45366 | opp_overlap 4230233, overlap 4230216 4230233 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGACCTTAAA TERM 5506 4230256 - 4230233 - H 100 -13.8 -3.29727 | opp_overlap 4230233, overlap 4230231 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5507 4230233 - 4230256 + H 100 -13.8 -5.81032 | opp_overlap 4230231 4230233 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5508 4231151 - 4231162 + G 70 -5.8 -4.25283 | overlap 4231133 CGATCTACTGATAGC CGTG GGCG CACG TTTTGATGACCGGGT ilvG 4230348 - 4231994 + | acetolactate synthase, large subunit, isozyme II ilvM 4231991 - 4232254 + | acetolactate synthase, isozyme II, small subunit TERM 5509 4232261 - 4232244 - f 70 -5.5 -4.3767 | overlap 4232246 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAATATAAAAATG ilvE 4232274 - 4233203 + | branched-chain-amino-acid transaminase TERM 5510 4233235 - 4233214 - f 100 -12.3 -5.61913 | opp_overlap 4233214 AATAAATACAAAAAA TGGGACGGC ACGC ACCGTCCCA TTTACGAGACAGACA TERM 5511 4233214 - 4233235 + F 85 -11.6 -3.53012 | opp_overlap 4233214 AATAAATACAAAAAA TGGGACGG CACGCA CCGTCCCA TTTACGAGACAGACA ilvD 4233268 - 4235118 + | dihydroxy-acid dehydratase TERM 5512 4235220 - 4235202 - g 70 -10.2 -3.14132 | overlap 4235175 GCGCCGGTCTACGAA GCGGCGCA GGT CACGCCGC TACAGAAAATGGAAA TERM 5513 4235399 - 4235355 - g 82 -3.4 -5.30348 | gap 1, opp_overlap 4235360 4235388 4235390, overlap 4235356 4235390 ACGGAAGAACAAAAA GCGCACGGCGTGATCA-CCGC TTCT GCGGGTAACCACGCGCAGGGC GTCGCGTTTTCTTCC ilvA 4235118 - 4236665 + | threonine ammonia-lyase, biosynthetic ilvY 4237552 - 4236662 - | transcriptional regulator IlvY TERM 5514 4236700 - 4236716 + g 100 -9.4 -5.60993 | opp_overlap 4236690 4236700 AGAACGCCTCAATCA GCGGCT CATGA AGCCGC TTTTTTTGTACGCAC TERM 5515 4237518 - 4237503 - G 83 -10.4 -4.07568 | opp_overlap 4237493 4237509 4237509 GCGCTGCGCCCAAAA TGGCGG CTTT CCGCCA GATGCAGGAAGGTTT TERM 5516 4237750 - 4237728 - g 70 -9.8 -3.19175 | CTTCAATACACTGAA TCTGCGCCAG CAG CTGGCACAGC TGGGCAAATGTCGCT ilvC 4237702 - 4239177 + | ketol-acid reductoisomerase TERM 5517 4239192 - 4239220 + T 100 -16.1 -3.24825 | overlap 4239193 4239196 AGTGCGATTCAGAGT TCAAGGCCTTCTC CCG GAGAAGGCCTTGC TGTTAGTTACGGTAA TERM 5518 4239193 - 4239219 + T 100 -19.6 -2.54574 | overlap 4239192 4239196 GTGCGATTCAGAGTT CAAGGCCTTCTC CCG GAGAAGGCCTTG CTGTTAGTTACGGTA TERM 5519 4239196 - 4239216 + T 100 -15.5 -3.42147 | overlap 4239193 4239192 CGATTCAGAGTTCAA GGCCTTCTC CCG GAGAAGGCC TTGCTGTTAGTTACG ppiC 4239504 - 4239223 - | peptidyl-prolyl cis-trans isomerase C TERM 5520 4239578 - 4239562 - H 100 -13.7 -4.18802 | ACATATATGGCAAAA GCCCGGA AAA TCCGGGC TTCGCAGGTCCCTCA TERM 5521 4239630 - 4239648 + H 73 -4.6 -4.81863 | overlap 4239620 CTATGGGCTACAGAG TCATTATC GGG GATGGTGA TTTTATTGTCAATTT TERM 5522 4241862 - 4241835 - g 84 -10.6 -3.72592 | AATGCGCATGAAGAA CGTCAACCAACT GTTT AGCTGGATGACG GAGATGCTCGAAGGC TERM 5523 4242181 - 4242166 - g 81 -10.4 -3.90922 | ACGCTGTGTAAAGAA CGCCGT CAGT ACGGCG AACTGGTGCGCCCGG rep 4240324 - 4242345 + | ATP-dependent DNA helicase Rep TERM 5524 4242409 - 4242435 + T 75 -8.8 -3.79747 | gap 1 AATGCACTTCCAGCG GCCAGTGGACA TAGCTC TG-CCACTGGC TTTCCTGATCAATAA gppA 4243876 - 4242392 - | guanosine-5'-triphosphate,3'-diphosphate diphosphatase rhlB 4245277 - 4244012 - | ATP-dependent RNA helicase RhlB TERM 5525 4244529 - 4244547 + g 100 -7.4 -5.5604 | overlap 4244530 CACTCTTCTTCGATC AGCGTTTG CAG CAAACGCA TTTTTTCTTCGTTAG TERM 5526 4244530 - 4244546 + g 86 -10.9 -3.91997 | overlap 4244529 ACTCTTCTTCGATCA GCGTTTG CAG CAAACGC ATTTTTTCTTCGTTA trx 4245408 - 4245737 + | thioredoxin TERM 5527 4246467 - 4246455 - g 70 -4.1 -4.63486 | ACGCCCGCAACAAAA TCCTC TTT GAGAA CTTAACCCCGCTGCA rho 4246064 - 4247323 + | transcription termination factor Rho TERM 5528 4247338 - 4247367 + G 95 -13.7 -3.38183 | opp_overlap 4247343, overlap 4247343 AATTTGTTTTATGCC AAAAACGCCACGT GTTT ACGTGGCGTTTTG CTTTTATATCTGTAA TERM 5529 4247362 - 4247343 - g 100 -13.6 -4.62069 | opp_overlap 4247338 4247343 GTTTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC TERM 5530 4247343 - 4247362 + G 100 -13.6 -4.75518 | opp_overlap 4247343, overlap 4247338 GTTTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC EcSMS35_4147 4247333 - 4247551 + | hypothetical protein TERM 5531 4247583 - 4247599 + G 100 -8.1 -5.7946 | TTTACTGACAGTGAG TACTGAT CTC ATCAGTA TTTTTTTATTCACGA TERM 5532 4248004 - 4248042 + G 89 -14 -3.14881 | opp_overlap 4248012, overlap 4247990 4248012 TTTGCCGTCTGGGCG GCCATTAATGCGTTCAAC ATG GTTGATGGCATTGATGGC TTGCTGGGCGGGTTG TERM 5533 4248629 - 4248619 - g 70 -6.8 -4.11751 | overlap 4248609 ATTAAGCGCGTAAAA CGCA GAC TGCG TAGAAATCGTGGTGG wecA 4247563 - 4248666 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase TERM 5534 4249092 - 4249072 - g 72 -11.1 -3.02144 | opp_overlap 4249076 4249077, overlap 4249077 GGATGGTGGGCAATA GCAAAGCCG ATG CGGCGTTGC TGGATGAAATGATCA TERM 5535 4249087 - 4249077 - g 74 -8.2 -3.92324 | opp_overlap 4249077 4249076, overlap 4249072 GTGGGCAATAGCAAA GCCG ATG CGGC GTTGCTGGATGAAAT EcSMS35_4149 4248678 - 4249724 + | lipopolysaccharide biosynthesis protein WzzE TERM 5536 4249735 - 4249760 + F 100 -14.7 -3.61517 | opp_overlap 4249725 AATAGCAACACTGCT GTGGTGAGCGC AAAG GCGCTCGCCGC TTATTCGAAGAGAAT TERM 5537 4250471 - 4250453 - g 100 -13.2 -4.15044 | GTGGCTTTGAAGAAA TCTGCCAG GCG CTGGCAGA CATCGCCACCACGCA EcSMS35_4150 4249780 - 4250910 + | UDP-N-acetylglucosamine 2-epimerase TERM 5538 4251085 - 4251100 + G 76 -3.9 -5.00616 | CGAGCGTAGTAAAAA CTGCC GTAGAA GGCGG TTTTTTACGAGCGAG wecC 4250907 - 4252169 + | UDP-N-acetyl-D-mannosamine dehydrogenase rfbB2 4252169 - 4253236 + | dTDP-glucose 4,6-dehydratase TERM 5539 4253507 - 4253521 + G 72 -7.8 -3.97947 | opp_overlap 4253494 CAGCCCAGCCCGGAC GGTCTG GCG CAGGCC TTTATCATCGGTGAA rfbA 4253255 - 4254136 + | glucose-1-phosphate thymidylyltransferase TERM 5540 4254513 - 4254500 - g 76 -8.1 -4.19258 | opp_overlap 4254503 4254504 ACAGTGGATTGAAAA TGCCG TGCG CGGCA CCTTTGATCATCAAT wecD 4254114 - 4254788 + | TDP-D-fucosamine acetyltransferase TERM 5541 4254892 - 4254920 + G 81 -9.6 -4.07568 | gap 1, opp_overlap 4254868 4254919, overlap 4254919 GATGGTGGTTTTACC CGTCGCTGCCAGC AGTG GCTGG-AGCAACG TTTTGGCAGCGCCAA wecE 4254793 - 4255923 + | TDP-4-keto-6-deoxy-D-glucose transaminase TERM 5542 4256039 - 4256059 + G 76 -11.1 -3.36289 | CCGGCGGGGCTTGGG CTGGCGGCA AAT TTCCGCCAG TTGATTACCGTGCTC EcSMS35_4156 4255925 - 4257175 + | polysaccharide biosynthesis protein TERM 5543 4257224 - 4257234 + G 72 -4.6 -4.65895 | overlap 4257196 CTCACCATAACCGAA CCGT TTT GCGG TTTTTCAATGACGCG TERM 5544 4257527 - 4257541 + G 71 -2.1 -5.02074 | ACGAGCTTTCCAGTG GCTTG AGATA TAAGC TTTTTTACCCACTAC TERM 5545 4257641 - 4257626 - g 83 -10.4 -4.07568 | opp_overlap 4257637, overlap 4257637 GCTTTTTTGCCAAAA CGCACC CAAA GGTGCG GGGCGAACTGCTGTA wecF 4257172 - 4258251 + | TDP-Fuc4NAc:lipid II Fuc4Nac transferase TERM 5546 4258552 - 4258533 - g 73 -9.2 -3.64822 | opp_overlap 4258548, overlap 4258521 ACCCGTCTACGCAAA CGCGTTGC TGAT GCACCGCG CCGTCCGCTGTTTAC TERM 5547 4258781 - 4258796 + G 71 -3.2 -4.77036 | CTTTCTGCGCCAGGA CAGCAA AGCG TGGCTG TTTTTCCTCGTCAGC wzyE 4258248 - 4259600 + | ECA biosynthesis protein WzyE EcSMS35_4159 4259603 - 4260343 + | WecB/TagA/CpsF family glycosyl transferase TERM 5548 4260357 - 4260390 + F 77 -10.3 -3.5087 | opp_overlap 4260362, overlap 4260355 4260362 GATTTTCCTCTCTTT GTAAAGCGACGGAGT GGTC ACTTCGTCGCCTTCC TGCTTTTTTATTACA TERM 5549 4260385 - 4260362 - f 81 -11 -3.53012 | opp_overlap 4260357 4260355 4260362 TCCTCTCTTTGTAAA GCGACGGAGT GGTC ACTTCGTCGC CTTCCTGCTTTTTTA TERM 5550 4260362 - 4260385 + F 84 -13.2 -2.65832 | opp_overlap 4260362, overlap 4260357 4260355 TCCTCTCTTTGTAAA GCGACGGAGT GGTC ACTTCGTCGC CTTCCTGCTTTTTTA TERM 5551 4260505 - 4260493 - f 75 -9.1 -3.57039 | TACCCATAACGATAA CCGGT AAC ACCGG AAAGCATGCAAACAC TERM 5552 4260860 - 4260870 + G 77 -8.2 -4.06892 | opp_overlap 4260859 4260856 GATCTCAGAAATCAC CGCC ATT GGCG TTTATGTCCAGTTCT TERM 5553 4261026 - 4261006 - g 71 -10.5 -2.87051 | opp_overlap 4261006, overlap 4261005 TTGCGATGATCAAAG TCACCACGA TTA TCGTGATGA TTGTCATTGGCCTGG TERM 5554 4261497 - 4261481 - g 72 -5.7 -4.58395 | CGCACTGGCGAAAAA CCGTCAG TTA CCGGCGG CAATGGCGAAAGTTT EcSMS35_4160 4260534 - 4261919 + | amino acid permease family protein TERM 5555 4262467 - 4262482 + F 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT aslB 4262605 - 4263840 + | arylsulfatase-activating protein AslB TERM 5556 4264014 - 4264059 + T 71 -7.7 -3.74077 | gap 1 TAGTCAGATTTAATC TGCGCGCGTG-GTGGATATTTT TTC AGGATCTCCATATACGCGTGCA TTTCGGTCTGTAGCG aslA 4265653 - 4263998 - | arylsulfatase TERM 5557 4265395 - 4265409 + g 100 -3.5 -5.63504 | opp_overlap 4265373, overlap 4265396 AGAAAACAACCACGT TCGGT TTCTT ACCGG TTTTTTTCTCAAGTT TERM 5558 4265427 - 4265442 + g 72 -4.6 -4.70921 | overlap 4265428 TTTTTCTCAAGTTCT GCCAGC TTCT GCTGGG TTTCTTTGTCTTGTG TERM 5559 4265770 - 4265760 - R 70 -2.6 -4.91459 | opp_overlap 4265760 TAATAGTGATAAAAA TAAA TTA TTTA TTTATCCAGAAAATG TERM 5560 4266237 - 4266262 + r 100 -11.9 -5.76633 | ACAGACCTGTTTTAA CGCCTGCTC CGTAATAA GAGCAGGCG TTTTTTTATGTATCA hemY 4267513 - 4266317 - | HemY protein EcSMS35_4168 4268709 - 4267516 - | putative uroporphyrin-III C-methyltransferase TERM 5561 4268455 - 4268466 + g 70 -3.6 -4.62336 | CAGCTCGGCTTTTTG GCTC TCCT GGGC TTTTTGCAGTGCAGT hemD 4269471 - 4268731 - | uroporphyrinogen-III synthase hemC 4270424 - 4269468 - | porphobilinogen deaminase TERM 5562 4272958 - 4272938 - g 75 -6.8 -4.30987 | overlap 4272934 ATTTCGCATAACAAA CTGCACGG CCTGT CAGTGCAG GTTGAAACCAATCAC cyaA 4270796 - 4273342 + | adenylate cyclase, class I cyaY 4273702 - 4273382 - | iron donor protein CyaY EcSMS35_4173 4274013 - 4273750 - | putative lipoprotein TERM 5563 4274305 - 4274273 - g 79 -4.7 -4.96848 | overlap 4274274 GCCTGCAGATAAAAA CGCACCGCCACCGAC CAA ACCGGTAGAGACGCA AACGCAATCCACGGT TERM 5564 4274356 - 4274333 - g 71 -3 -4.82901 | gap 1, opp_overlap 4274343, overlap 4274334 GGTGCCGGATAAAAA CGACC-GCGCC ACT GGCGATGGTCC ATCCCAGGTGAATTA EcSMS35_4174 4274172 - 4274375 + | putative lipoprotein dapF 4274412 - 4275236 + | diaminopimelate epimerase TERM 5565 4275351 - 4275388 + G 74 -10.6 -3.16564 | gap 1, opp_overlap 4275354, overlap 4275356 CGCGCGCAGTTGAAG CGATACGTGTGCCGCAT CCGGT ACGCGGCAC-CGTTTCG TTGGTCGAATGGCAC TERM 5566 4275356 - 4275383 + G 72 -7.7 -3.95852 | gap 1, opp_overlap 4275354, overlap 4275351 GCAGTTGAAGCGATA CGTGTGCCGCAT CCGGT ACGCGGCAC-CG TTTCGTTGGTCGAAT TERM 5567 4275464 - 4275487 + G 72 -5.2 -4.52047 | overlap 4275456 GCGTTGTTGATGGAA CAGGCTATTG CCAA CGAAGGCCTG TTTTATCGTCTACTC EcSMS35_4176 4275233 - 4275940 + | hypothetical protein TERM 5568 4276083 - 4276065 - g 70 -5.8 -4.18018 | TTTTGCCAGTGAAAA CGGCCTGC AAA GCTGGCAG CAATGTGATGTGACG TERM 5569 4276288 - 4276275 - g 77 -6.7 -4.57569 | TCATCTGCCGAAAAA CATCG ACGT CGATG ATATGAATCGGCTGC xerC 4275937 - 4276833 + | tyrosine recombinase XerC EcSMS35_4178 4276833 - 4277549 + | HAD-superfamily hydrolase TERM 5570 4277700 - 4277672 - g 83 -10.1 -4.05714 | opp_overlap 4277683, overlap 4277674 AGCCTTAATGACAAA CAGCGCGAAGCGG TGG CCGCGCCACGCAG CAACCTTCTGGTGCT TERM 5571 4277698 - 4277674 - g 85 -11.3 -3.6217 | opp_overlap 4277683, overlap 4277672 CCTTAATGACAAACA GCGCGAAGCGG TGG CCGCGCCACGC AGCAACCTTCTGGTG TERM 5572 4277683 - 4277705 + G 71 -9 -3.44051 | opp_overlap 4277674 4277672 CAAACAGCGCGAAGC GGTGGCCGCG CCA CGCAGCAACC TTCTGGTGCTGGCGG uvrD 4277633 - 4279795 + | DNA helicase II EcSMS35_4180 4280752 - 4279850 - | hypothetical protein TERM 5573 4280732 - 4280742 + g 100 -3.2 -5.85011 | opp_overlap 4280717 CGTTAATAAAAATAA CGTT GCG AGCG TTTTTTTCATTTTTG EcSMS35_4181 4281599 - 4280835 - | hypothetical protein EcSMS35_4182 4281612 - 4281725 + | hypothetical protein corA 4281969 - 4282919 + | magnesium and cobalt transport protein CorA TERM 5574 4282955 - 4282926 - T 82 -9.3 -4.1891 | opp_overlap 4282927, overlap 4282927 TGGTTGTAATATAAA TGCCGGGTAAAGA TTGT TCTTTATCCGGCT TATTGCTGAAAATTG TERM 5575 4282927 - 4282954 + T 100 -15 -3.72592 | opp_overlap 4282926 4282927 GGTTGTAATATAAAT GCCGGGTAAAGA TTGT TCTTTATCCGGC TTATTGCTGAAAATT TERM 5576 4282954 - 4282927 - T 83 -12.8 -3.11024 | opp_overlap 4282927, overlap 4282926 GGTTGTAATATAAAT GCCGGGTAAAGA TTGT TCTTTATCCGGC TTATTGCTGAAAATT EcSMS35_4184 4283452 - 4282955 - | hypothetical protein EcSMS35_4185 4284297 - 4283449 - | hypothetical protein TERM 5577 4284554 - 4284583 + r 93 -9.4 -5.04385 | opp_overlap 4284556, overlap 4284582 CTGTCAGCATGGCAA TATGCCCACTCT CATGCA AGAGTCGGCATA TTTTTTCAGAATATA rarD 4285497 - 4284607 - | RarD protein TERM 5578 4284695 - 4284705 + g 72 -4.6 -4.59773 | AAGGTTACCATCTTA TCGG CAC CCGG TTTTTCACCATAAAA TERM 5579 4284791 - 4284769 - G 74 -2 -5.10497 | gap 1 AATGTACTGAAAAAA GCCTAACGT TGAGAG ACGC-AGGC GTGTCGCAGCCGCAG TERM 5580 4284942 - 4284924 - G 72 -8.8 -3.82208 | TAGCAAACAGGTAAA TCGCCGCC ACG GGCAGCAA CCACATAGTTTCGAT TERM 5581 4285393 - 4285360 - G 85 -3.1 -5.40464 | gap 1, overlap 4285368 CACCATAAAGAAAAA CGACCAGATCACG-CG ATG CGTCAGGATCTCATCG GCGGGCACGTAGTAA TERM 5582 4285483 - 4285448 - G 74 -3.2 -4.89521 | gap 1, opp_overlap 4285450 4285451, overlap 4285451 ATACCCCAAATAAAA TAAGCGGCAAGAGCG AGTAATA CGC-CCTGCCGCGTT TGTTTTGCATCCATC TERM 5583 4285450 - 4285481 + g 70 -3.6 -4.68908 | gap 1, opp_overlap 4285448 4285451, overlap 4285451 ACCCCAAATAAAATA AGCGGCAAGAGCG AGTAATA CGCCCT-GCCGCG TTTGTTTTGCATCCA TERM 5584 4285480 - 4285451 - G 90 -9.3 -4.54026 | gap 1, opp_overlap 4285450 4285451, overlap 4285448 CCCCAAATAAAATAA GCGGCAAGAGCG AGTAATA CGC-CCTGCCGC GTTTGTTTTGCATCC TERM 5585 4285526 - 4285538 + r 73 -4.8 -4.67943 | opp_overlap 4285526, overlap 4285519 4285521 TTTTAATTGGTAACA GCAG TTTAC CTGC TTTTATGTCTTCAAC EcSMS35_4187 4286016 - 4285549 - | thioesterase family protein pldA 4286181 - 4287050 + | phospholipase A1 TERM 5586 4287126 - 4287147 + F 100 -12.3 -5.27335 | overlap 4287133 TTGCAGTTTCTCGCG CAGGCGCTG AAAA TAGCGCCTG TTTTTATTTCAGGCA TERM 5587 4287679 - 4287702 + G 74 -8.8 -3.87994 | overlap 4287675 4287674 GCCCTCGGTCAGCTG CGTCAGCGTT TTCC GACGCTGCCG TTTATGGCGCTGACT TERM 5588 4287775 - 4287794 + G 72 -6.4 -4.30576 | opp_overlap 4287774, overlap 4287765 4287777 CTGGGGCTGAACGAT CCGCTGAT TCAA ATCAGCAG TTTTGATCGTCCGAA TERM 5589 4288805 - 4288789 - g 71 -9.5 -3.5394 | opp_overlap 4288788 AAACTGTTCGCCAAA TTACGCA AAC TGCGTAA ATCGATTGCCGATGA recQ 4287169 - 4289004 + | ATP-dependent DNA helicase RecQ rhtC 4289068 - 4289688 + | threonine efflux protein TERM 5590 4289709 - 4289745 + T 87 -8.8 -4.58395 | gap 1, opp_overlap 4289712 4289721, overlap 4289712 GACGCGTCATCAGAG TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA TTTTTCACGCATGCC TERM 5591 4289741 - 4289712 - T 100 -14.3 -3.29471 | opp_overlap 4289712 4289709, overlap 4289721 GCGTCATCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA TERM 5592 4289712 - 4289741 + T 83 -12.1 -3.23855 | opp_overlap 4289712 4289721, overlap 4289709 GCGTCATCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA rhtB 4290370 - 4289750 - | homoserine/homoserine lactone efflux protein TERM 5593 4291436 - 4291451 + G 74 -3.2 -5.00616 | opp_overlap 4291416 TGCGCTCAGTCGCGC TCCACG CTAT CGTTGA TTTTTTCAACAGGCA pldB 4290481 - 4291503 + | lysophospholipase L2 EcSMS35_4193 4291511 - 4292311 + | Cof family hydrolase EcSMS35_4194 4292387 - 4293286 + | 10 TMS drug/metabolite exporter (DME) family protein TERM 5594 4293577 - 4293557 - f 70 -7.5 -3.89346 | opp_overlap 4293566, overlap 4293561 GCTGCACCGGATAAA TCAACAGCG TCT CGCTGGCGA GATCTTCCGGTGTAA TERM 5595 4293573 - 4293561 - f 75 -9.1 -3.61244 | opp_overlap 4293566, overlap 4293557 CACCGGATAAATCAA CAGCG TCT CGCTG GCGAGATCTTCCGGT TERM 5596 4294092 - 4294102 + F 72 -6.8 -4.23434 | overlap 4294088 GCCGCAGTTCCGCAA CGCT TGT AGCG TTTTCAGGTGTTTTA TERM 5597 4294422 - 4294400 - g 70 -4.1 -4.71426 | gap 1, opp_overlap 4294420, overlap 4294404 CTGGGAGCAACAAAA GCAAGCGGGT ATCG ACCTGCT-GC CGGTGGGCGATTTTG TERM 5598 4296458 - 4296433 - g 74 -7.5 -4.07687 | overlap 4296451 ACTGTGGCCTGAAAA CGCGCGGCT GGCCAGAA ACCCGCGCG GCACTGGCGAACATG metE 4294245 - 4296506 + | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase TERM 5599 4296545 - 4296566 + T 87 -10.2 -4.41353 | opp_overlap 4296545 ATTGCAGCACAATAA TGGCTTCC AACACC GGAAGCCA TTTTGCTATGTATGC TERM 5600 4296566 - 4296545 - T 85 -10.9 -3.84674 | opp_overlap 4296545 ATTGCAGCACAATAA TGGCTTCCA ACAC CGGAAGCCA TTTTGCTATGTATGC EcSMS35_4196 4297496 - 4296600 - | LysR family transcriptional regulator TERM 5601 4297546 - 4297521 - R 71 -10.5 -2.74144 | opp_overlap 4297518, overlap 4297520 TGGTCAGTGGTAAAG TGGCTGAATCT CTCC AGATTCAGCCG TAATCATTGCCTGAG EcSMS35_4197 4298797 - 4297574 - | cytosine/purines/uracil/thiamine/allantoin family permease TERM 5602 4298424 - 4298395 - G 73 -3.5 -4.8667 | overlap 4298419 TAGAGGCGACAAAAA TGACACAGCCAGC CGCC ACTAACAGTGCCA GTGGAACTTCCAGTC EcSMS35_4198 4299212 - 4298823 - | hypothetical protein EcSMS35_4199 4300185 - 4299229 - | putative carbamate kinase TERM 5603 4299295 - 4299309 + g 90 -11.4 -3.8646 | opp_overlap 4299294 4299295 4299297 TTGCGGTGAAGTAAT CAGGCC GCT GGCCTG TTTGCCTTGTTGCTG TERM 5604 4299309 - 4299295 - G 73 -11.4 -2.60075 | opp_overlap 4299295, overlap 4299294 4299297 TTGCGGTGAAGTAAT CAGGCC GCT GGCCTG TTTGCCTTGTTGCTG TERM 5605 4300022 - 4300009 - G 72 -5.9 -4.30719 | GCGGCGCAGAATAAA GCCCA CCTG CGGGC CATTACCGTGGGTTA EcSMS35_4200 4301602 - 4300178 - | hypothetical protein EcSMS35_4201 4303158 - 4301599 - | acyl-CoA synthetase EcSMS35_4202 4304113 - 4303253 - | hypothetical protein TERM 5606 4303302 - 4303280 - G 71 -9.1 -3.54424 | opp_overlap 4303278 GTTCAGGGTTCGAAA GCCATGCAG CATTC CTGCAAGGC AATCTACTCCTGACG TERM 5607 4303796 - 4303770 - G 70 -5.9 -4.19735 | TGCTGGAAAACCAAA GGGAATGCC TCAAGTGTC AGCATTCCC CCCACAAATGGCGAC EcSMS35_4203 4304787 - 4304119 - | isochorismatase family protein EcSMS35_4204 4304805 - 4304918 + | hypothetical protein TERM 5608 4304947 - 4304979 + G 91 -10.7 -4.19238 | opp_overlap 4304954 4304958, overlap 4304948 4304950 GGGAGTCAAAGAGTG GCATACAGCAACAAA TTT TTTGATGCTGTATGG TTTTGAGATTAAAAA TERM 5609 4304948 - 4304978 + G 87 -14.2 -3.11222 | opp_overlap 4304954 4304958, overlap 4304947 4304950 GGAGTCAAAGAGTGG CATACAGCAACAAA TTT TTTGATGCTGTATG GTTTTGAGATTAAAA TERM 5610 4304950 - 4304976 + G 72 -11 -3.11289 | opp_overlap 4304954 4304958, overlap 4304948 4304947 AGTCAAAGAGTGGCA TACAGCAACAAA TTT TTTGATGCTGTA TGGTTTTGAGATTAA EcSMS35_4205 4304897 - 4305013 + | hypothetical protein EcSMS35_4206 4305853 - 4305044 - | dienelactone hydrolase family protein EcSMS35_4207 4306101 - 4305985 - | hypothetical protein udp 4306115 - 4306879 + | uridine phosphorylase TERM 5611 4306905 - 4306884 - T 100 -13.7 -5.63517 | opp_overlap 4306881 TGCTGAAATAAAAAA CGCTCCCCA ACTT CGGGGAGCG ATATCAGTTATTGAC EcSMS35_4209 4308403 - 4306913 - | integral membrane protein EcSMS35_4210 4308922 - 4308416 - | hypothetical protein TERM 5612 4308623 - 4308611 - G 85 -6.9 -4.73682 | opp_overlap 4308611, overlap 4308612 CGTCACAATATAAAA CGCGG TTG CCGCA ATTCCTGTTGCCGTT EcSMS35_4211 4309913 - 4308939 - | periplasmic binding protein TERM 5613 4309113 - 4309129 + g 71 -2.1 -5.00616 | opp_overlap 4309112, overlap 4309115 CTTTGCCAGAACATC CACCACA TCC TGCGGCG TTTTTTGCGACACAA EcSMS35_4212 4310567 - 4309938 - | putative 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase EcSMS35_4213 4311561 - 4310557 - | 2-dehydro-3-deoxygalactonokinase EcSMS35_4214 4312439 - 4311585 - | IclR family transcriptional regulator TERM 5614 4312234 - 4312255 + g 72 -4.3 -4.68593 | overlap 4312238 GTTGTGCTCCGGGTC GTGCCGGTG AACT CGCCGATAC TTTTTAGGTCATGGC TERM 5615 4313184 - 4313170 - g 85 -7.1 -4.78839 | AAGGCGACAATAAAA CCCAG GGCAA CTGGG GCGAGGTAGTATTGA rmuC 4312569 - 4313996 + | DNA recombination protein RmuC ubiE 4314091 - 4314846 + | ubiquinone/menaquinone biosynthesis methyltransferase UbiE TERM 5616 4315006 - 4315028 + G 76 -10.6 -3.29471 | overlap 4315007 TTCGACGTCATTGAT TCTGGTGTTC AGC GAACGCCAGG TTGATGTACTGGGCG TERM 5617 4315007 - 4315027 + G 73 -11.9 -2.57468 | overlap 4315006 TCGACGTCATTGATT CTGGTGTTC AGC GAACGCCAG GTTGATGTACTGGGC EcSMS35_4217 4314860 - 4315465 + | hypothetical protein TERM 5618 4315581 - 4315544 - g 83 -9.9 -4.1196 | gap 1, opp_overlap 4315544 4315547 AACTGATCCCCAAAA TGCGTATCACCCT-GCCG CTA CGGCTATGGCGATACTCA TTATTCTGGATGCCA ubiB 4315462 - 4317102 + | 2-polyprenylphenol 6-hydroxylase tatA 4317181 - 4317450 + | sec-independent protein translocase protein TatA tatB 4317454 - 4317969 + | twin arginine-targeting protein translocase TatB tatC 4317972 - 4318748 + | twin arginine-targeting protein translocase TatC TERM 5619 4318775 - 4318750 - f 88 -8.9 -4.49364 | opp_overlap 4318752 4318755, overlap 4318751 4318752 4318755 AAACTGAAGAATAAA TTCAACCGCCC GTCA GGGCGGTTGTC ATATGGAGTACAGGA TERM 5620 4318774 - 4318751 - f 90 -12.4 -3.27992 | opp_overlap 4318752 4318755, overlap 4318750 4318752 4318755 AACTGAAGAATAAAT TCAACCGCCC GTCA GGGCGGTTGT CATATGGAGTACAGG TERM 5621 4318752 - 4318773 + F 100 -15.9 -2.63596 | opp_overlap 4318752 4318751 4318750 4318755, overlap 4318755 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5622 4318773 - 4318752 - f 100 -15.9 -2.5571 | opp_overlap 4318752 4318755, overlap 4318751 4318750 4318755 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5623 4318755 - 4318770 + F 88 -11.8 -3.47078 | opp_overlap 4318752 4318751 4318750 4318755, overlap 4318752 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA TERM 5624 4318770 - 4318755 - f 85 -11.8 -3.41554 | opp_overlap 4318755 4318752, overlap 4318752 4318751 4318750 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA tatD 4318790 - 4319572 + | deoxyribonuclease TatD rfaH 4320057 - 4319569 - | transcriptional activator RfaH TERM 5625 4320636 - 4320624 - g 85 -3.3 -5.4505 | overlap 4320625 CTTGCCAACAAAAAA TCGTC TCT GGCGA TGACGTCGATCTCAA TERM 5626 4320854 - 4320872 + G 70 -6.6 -4.04206 | TGGTGTGTGGCGCAT CCGGGCGA ACG TTTCCCGG TTTCTGTGGCGCTGG ubiD 4320224 - 4321717 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 5627 4321722 - 4321710 - f 70 -6.2 -4.24123 | opp_overlap 4321709 4321705 4321710 TTAACAACGGTAAAA GCGC CTGAT GCGC GTTTGTTTTGCCCTA fre 4321763 - 4322464 + | NAD(P)H-flavin reductase TERM 5628 4322494 - 4322476 - T 100 -9.5 -5.4251 | CTGAGATATAAAAAA CCCGCCC CTGAC AGGCGGG AAGAACGGCAACTAA TERM 5629 4322561 - 4322598 + T 70 -9.1 -3.1372 | overlap 4322531 4322563 4322570 4322573 CGGCAATCGGTGCAC GATGCCTGATGCGACGC TGGC GCGTCTTATCAGGCCTA TATTGGTGCAGGATC TERM 5630 4322563 - 4322596 + T 81 -11.7 -3.12895 | overlap 4322531 4322561 4322570 4322573 GCAATCGGTGCACGA TGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TATATTGGTGCAGGA fadA 4323818 - 4322655 - | acetyl-CoA C-acyltransferase FadA fadB 4326017 - 4323828 - | fatty oxidation complex, alpha subunit FadB TERM 5631 4325822 - 4325802 - G 76 -3.9 -4.91459 | overlap 4325803 GAACAGGGACAAAAA TTCGGTGAT ATC AGCACCGAC GATAAAGGCTGCTTT TERM 5632 4326135 - 4326113 - H 73 -4.8 -4.60648 | AAAAGATTAAAGAAA TGCCGATC TGATCAC GCTCGGCA GAAATCACGCTCTGG pepQ 4326207 - 4327538 + | Xaa-Pro dipeptidase TERM 5633 4327822 - 4327853 + G 85 -13 -3.23853 | opp_overlap 4327821 4327824, overlap 4327821 CGGCGTCGGGGAAAT TACCGCCGTGGTGG TGCG CTACTACGGCGGCA TATTGCTTGGCACCA TERM 5634 4327851 - 4327824 - g 71 -11.2 -2.90496 | opp_overlap 4327822 4327821, overlap 4327821 GCGTCGGGGAAATTA CCGCCGTGGTGG TGCG CTACTACGGCGG CATATTGCTTGGCAC EcSMS35_4229 4327538 - 4328152 + | hypothetical protein TERM 5635 4329120 - 4329150 + G 77 -9.7 -3.57144 | gap 1 TAACCAGGCGTTTTT CCAGGTGG-TGTCG ATGG CGACAACCGCCGGG TTTACAACTGACAGC trkH 4328191 - 4329642 + | Trk system potassium uptake protein TrkH hemG 4329654 - 4330199 + | protoporphyrinogen oxidase TERM 5636 4332187 - 4332174 - T 74 -6.7 -4.41177 | overlap 4332178 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5637 4332413 - 4332389 - T 72 -8 -3.93061 | gap 1, opp_overlap 4332396 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5638 4332967 - 4332955 - T 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5639 4334269 - 4334258 - T 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5640 4335456 - 4335435 - T 76 -8.7 -3.91196 | opp_overlap 4335452 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TGAAACAGAATTTGC TERM 5641 4335622 - 4335603 - T 100 -13.6 -3.83214 | opp_overlap 4335603, overlap 4335615 4335616 4335618 TCAAATTAAGCGAAA GGCCATCC AAAA GGATGGCC TTTTTGCGCTGGTGC TERM 5642 4335603 - 4335622 + T 100 -13.6 -4.63527 | opp_overlap 4335603 4335615 4335616 4335618 TCAAATTAAGCGAAA GGCCATCC AAAA GGATGGCC TTTTTGCGCTGGTGC TERM 5643 4335679 - 4335645 - T 86 -7.7 -4.82901 | opp_overlap 4335645, overlap 4335618 4335616 4335615 GCTGGTGCAGAAAAA GGCCGGCTGCGACGC TGGCT GCGTCTGATCCAGCC TACTCTTGCTTATCC mobB 4336216 - 4335689 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 5644 4335989 - 4336014 + g 100 -14.1 -3.85698 | opp_overlap 4335986, overlap 4336004 4336010 TTCCGTCATCAAGGC CCATCGTTGCT GGCT GGCAACGATGG TTTGTGCCGCGCCAG TERM 5645 4336193 - 4336203 + g 71 -3.2 -4.7373 | AGCAAAGGCGAGTAA CGGT ATC ATCG TTTTTCCTGCCATCG mobA 4336782 - 4336198 - | molybdopterin-guanine dinucleotide biosynthesis protein A EcSMS35_4239 4336852 - 4337121 + | hypothetical protein TERM 5646 4338155 - 4338143 - g 72 -6.3 -4.31043 | ATAGAACAGGCAAAA GTTCT ACA AGAAC CCCCTTTGCAATTAA EcSMS35_4240 4337198 - 4338184 + | protein serine/threonine kinase RdoA dsbA 4338201 - 4338827 + | thiol:disulfide interchange protein DsbA TERM 5647 4338841 - 4338825 - f 77 -3.1 -5.24129 | overlap 4338833 CTGTCCGAGAAAAAA TAATTCA ATG TAAATTA CATAAAGCCCGTGAA TERM 5648 4338867 - 4338848 - f 100 -13.6 -4.17516 | opp_overlap 4338848 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 5649 4338848 - 4338867 + F 100 -13.6 -6.01369 | opp_overlap 4338848 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA EcSMS35_4242 4338852 - 4338992 + | hypothetical protein TERM 5650 4339164 - 4339154 - T 74 -4 -4.91712 | opp_overlap 4339154 GTTAAGTTATAAAAA CTTT GAC AAAG GCTTTTTTAATTCTC TERM 5651 4340450 - 4340414 - T 82 -8.9 -4.25104 | gap 1, opp_overlap 4340414 4340415 4340445, overlap 4340416 4340417 TTTTGTTCATTAAAA TACTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA-A CTTACTTGTCCTGCC TERM 5652 4340449 - 4340416 - T 100 -14 -3.73042 | opp_overlap 4340415 4340414 4340445, overlap 4340414 4340417 TTGTTCATTAAAATA CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA ACTTACTTGTCCTGC TERM 5653 4340448 - 4340417 - T 93 -15.3 -2.83504 | opp_overlap 4340415 4340414 4340445, overlap 4340416 4340414 TGTTCATTAAAATAC TCACTCGCCTCTG CTCATT CAGAGGCGAGTAA AACTTACTTGTCCTG EcSMS35_4244 4341408 - 4340452 - | acyltransferase domain-containing protein TERM 5654 4340958 - 4340921 - G 70 -6.3 -4.22554 | gap 1 TGACGTAATAAATAA GCGCGGGA-ATAACGCTT CAT AAACGGCATATCCAGCGC CCAGCACGCCAGGCC TERM 5655 4341227 - 4341212 - G 77 -3.2 -5.10601 | overlap 4341213 ATAAAATCACAAAAA CGCGAA ACCT TTCGCC AAATGACTGGCACAG TERM 5656 4341314 - 4341294 - G 100 -6.9 -5.4833 | overlap 4341297 GGACGGAACAAAAAA TAGTGACCA AAA TGGTCAATA CGATACTCAGCAAAA TERM 5657 4341413 - 4341403 - G 74 -8.2 -3.9122 | overlap 4341390 CAGTGCGCTAAAGAA GCGC AAG GCGC AGATTTTAGCAGAAA EcSMS35_4245 4341689 - 4341504 - | hypothetical protein TERM 5658 4341578 - 4341555 - G 74 -6.1 -4.56642 | overlap 4341557 AAAAACAAAGATAAA CATCATGCT GTAAAA AGCATGATA ATAAATTAAAAGTGA TERM 5659 4342142 - 4342129 - g 70 -3.7 -4.66833 | opp_overlap 4342130, overlap 4342130 CGCGAAGCCGAAAAA GCCGG GCGT CCGGT GCTTATCAGCACTGG TERM 5660 4342376 - 4342346 - g 76 -3.8 -5.00616 | GCGTCGGTGAAAAAA CCGCGCAGGCATTG CTG CAAGGTCTTGGCGG ACTGGATACGCTGTA TERM 5661 4342675 - 4342657 - g 77 -10.2 -3.5936 | opp_overlap 4342672, overlap 4342649 GCTAAAGGGGCGAAA CCCGCAGC CAG GCCGCAGG AAACCAGTGTTGCAG TERM 5662 4343563 - 4343552 - g 81 -7.2 -4.64334 | AACCGCTGAAGAAAA CGCC GGGT GGCG CGCCGTCAACGTCGG polA 4341748 - 4344534 + | DNA polymerase I TERM 5663 4344758 - 4344783 + T 100 -19.1 -5.4505 | opp_overlap 4344751 GCTGAATATTTTAGC CGCCCCAGTCA GTAA TGACTGGGGCG TTTTTTATTGGGCGA EcSMS35_4247 4344902 - 4344753 - | hypothetical protein EcSMS35_4248 4345548 - 4344916 - | putative GTP-binding protein EngB TERM 5664 4346021 - 4346066 + H 100 -19.3 -3.69341 | opp_overlap 4346033, overlap 4346033 CGTTAAGGGTTATGA GTCAGGAAAAAAGGCGACAGA GTAA TCTGTCGCCTTTTTTCTTTGC TTGCTTTCTGTTAGA TERM 5665 4346033 - 4346054 + H 100 -14.5 -5.72053 | opp_overlap 4346033, overlap 4346021 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG TERM 5666 4346054 - 4346033 - H 100 -14.5 -5.1675 | opp_overlap 4346033 4346021 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG EcSMS35_4249 4346130 - 4346639 + | hypothetical protein TERM 5667 4346762 - 4346721 - Tf 72 -10.2 -2.91144 | overlap 4346718 4346723 4346744 4346746 TTATTCGTTAAACTA CAG-CGGTTGTCGCGGCGAC AAAA GTGGCTGCG-CAACCGGCTG ATGACCCGAAACGGG EcSMS35_4250 4346829 - 4346713 - | hypothetical protein TERM 5668 4346801 - 4346744 - Gf 100 -14.2 -4.36914 | gap 3, overlap 4346723 4346721 4346718 4346746 GTCGCGGCGACAAAA GTGGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCCGC CAGAGACGCCATCGG TERM 5669 4346799 - 4346746 - Gf 93 -15.4 -2.52946 | gap 3, overlap 4346723 4346721 4346718 4346744 CGCGGCGACAAAAGT GGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCC GCCAGAGACGCCATC hemN 4346828 - 4348201 + | oxygen-independent coproporphyrinogen III oxidase TERM 5670 4348246 - 4348210 - TR 74 -10.3 -3.24735 | gap 1, opp_overlap 4348206, overlap 4348205 4348203 GATTTAAATAGTGAA TGGCGC-TTCGTTTAC AAAGTA GAAAACGAAAGCGCCA TCAATGTGCTGAGAA EcSMS35_4252 4348407 - 4348294 - | hypothetical protein ntrC 4350031 - 4348613 - | nitrogen regulation protein NR(I) glnL 4351083 - 4350034 - | nitrogen regulation protein NR(II) TERM 5671 4350643 - 4350655 + g 75 -4.7 -4.83269 | opp_overlap 4350644, overlap 4350644 4350654 CGCCGCGCCACGTAA ACCGC CAA GCGGA TTTTTAATCTCATGT TERM 5672 4351195 - 4351178 - R 87 -7 -5.28176 | TTGACGGAGAAAAAA GCCCAT GCAGAG ATGGGC TGAAAGTTTCCACGG glnA 4352666 - 4351257 - | glutamine synthetase TERM 5673 4351879 - 4351889 + g 70 -6.8 -4.13945 | CCGGAACCGTTATCA CCGA ACA TCGG TTTTGGCATAAAGGT TERM 5674 4352886 - 4352872 - H 77 -10 -3.481 | opp_overlap 4352847 4352834 4352835, overlap 4352847 4352866 CAATGGAAACATTAA GCACCA TAT TGGTGC AATGACCTTTGGATA typA 4353039 - 4354862 + | GTP-binding protein TypA TERM 5675 4354903 - 4354886 - f 100 -11.3 -5.28176 | opp_overlap 4354886 TTTAGTTATAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTTTTACCTGT TERM 5676 4354886 - 4354903 + F 100 -11.3 -6.13 | opp_overlap 4354886 TTTAGTTATAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTTTTACCTGT TERM 5677 4355626 - 4355616 - g 93 -4 -5.52986 | ACGGTAGTAAAAAAA TTGA TTT TCAA ACCCGTCAGAATGCC EcSMS35_4257 4355079 - 4355789 + | GntR family transcriptional regulator EcSMS35_4258 4355899 - 4356777 + | AP endonuclease TERM 5678 4356824 - 4356808 - f 79 -6.6 -4.63486 | ACGCTGTTAATAAAA CCATTC CATAT GAATGG TCGGTATCTTATTGC EcSMS35_4259 4356879 - 4358144 + | major facilitator transporter TERM 5679 4358174 - 4358149 - T 76 -10.5 -3.37612 | opp_overlap 4358151 4358160 4358161 CTGAAGCTTAATTAA TGGCCGGAT GTGGCTTA ATCCGGCCA ACGGAAACCGTATCA TERM 5680 4358160 - 4358209 + T 72 -7.1 -4.08767 | opp_overlap 4358149 4358206, overlap 4358151 4358161 4358195 4358196 TTAATGGCCGGATGT GGCTTAATCCGGCCAACGG AAACCGTATCAA CCGTAGGCCGGATAAGGCG TTTTCGCCGCATCCG TERM 5681 4358161 - 4358208 + T 76 -10.6 -3.05046 | opp_overlap 4358149 4358206, overlap 4358151 4358160 4358195 4358196 TAATGGCCGGATGTG GCTTAATCCGGCCAACGG AAACCGTATCAA CCGTAGGCCGGATAAGGC GTTTTCGCCGCATCC TERM 5682 4358195 - 4358228 + T 70 -6.5 -4.18018 | opp_overlap 4358206, overlap 4358161 4358160 4358196 AACCGTATCAACCGT AGGCCGGATAAGGCG TTTT CGCCGCATCCGGCAG TTTTACATCAGAAGA TERM 5683 4358196 - 4358227 + T 73 -10 -3.10597 | opp_overlap 4358206, overlap 4358161 4358160 4358195 ACCGTATCAACCGTA GGCCGGATAAGGCG TTTT CGCCGCATCCGGCA GTTTTACATCAGAAG EcSMS35_4260 4358928 - 4358236 - | outer membrane porin EcSMS35_4261 4360398 - 4358995 - | sugar (glycoside-Pentoside-hexuronide) transporter family protein TERM 5684 4360331 - 4360349 + g 90 -7.4 -5.00884 | opp_overlap 4360329 AAATTCGAACCGACG TCGCCCAT ACC ATAGGCGA TTTTTTCCCGCAGAT TERM 5685 4360411 - 4360430 + r 87 -10 -4.3953 | opp_overlap 4360414, overlap 4360419 CATAATCACTCCTTA TAACGCCC CGCA GGGCGTTG TTTATTATAATTACG TERM 5686 4360427 - 4360414 - R 74 -9.5 -3.30619 | opp_overlap 4360411 4360419 AATCACTCCTTATAA CGCCC CGCA GGGCG TTGTTTATTATAATT EcSMS35_4262 4361826 - 4360441 - | sugar transporter family protein EcSMS35_4263 4363908 - 4361872 - | glycosy hydrolase family protein EcSMS35_4264 4365005 - 4364106 - | aldose-1-epimerase family protein EcSMS35_4265 4366365 - 4365124 - | N-acylglucosamine 2-epimerase EcSMS35_4266 4367259 - 4366381 - | deoxyribose-phosphate aldolase EcSMS35_4267 4368179 - 4367283 - | 3-hydroxyisobutyrate dehydrogenase TERM 5687 4367626 - 4367612 - G 75 -7 -4.36914 | overlap 4367613 GGGCTTCGCACAAAA CGGCGG CTT CTGCCG ACAACGCATTGAGCG TERM 5688 4369208 - 4369221 + G 82 -2.4 -5.35222 | GGGATCCCTGACTGT GATC AAACCC GATC TTTTTTGTCACTTTT EcSMS35_4268 4368347 - 4369243 + | PfkB family kinase EcSMS35_4269 4369277 - 4370062 + | DeoR family transcriptional regulator yihX 4370161 - 4370760 + | phosphatase YihX rbn 4370754 - 4371626 + | tRNA-processing ribonuclease BN dtd 4371623 - 4372060 + | D-tyrosyl-tRNA(Tyr) deacylase EcSMS35_4273 4372105 - 4373046 + | acetyltransferase TERM 5689 4373052 - 4373077 + F 70 -7.5 -3.95036 | overlap 4373053 4373055 AGAAGAGTAGCTGAT GGAGAGGGGCG GTGC TGCCTCTCTCA TTCTTTCAGGTCATT TERM 5690 4373053 - 4373076 + F 75 -11 -2.96298 | overlap 4373052 4373055 GAAGAGTAGCTGATG GAGAGGGGCG GTGC TGCCTCTCTC ATTCTTTCAGGTCAT TERM 5691 4373689 - 4373679 - g 71 -2.4 -4.94811 | TTAAAAATAAAGAAA CCTC ACT GTGG AAACGCAAAGTACCA TERM 5692 4374469 - 4374442 - g 77 -5.8 -4.61482 | opp_overlap 4374442 4374447, overlap 4374446 TGTGCCAAAAAATAA TAAACCAAAAAC AATC ATTTTTGATTTA CGTTTTCTTAGTGCA EcSMS35_4274 4373462 - 4375276 + | hypothetical protein TERM 5693 4375408 - 4375445 + F 86 -9.8 -4.34402 | opp_overlap 4375408 4375419 CACCAGCATTCAGAA CTCCTGTGAAAGCGGC ATAGTG GCCGCCTGTGCAGGAG TTTTGCTATGACCCG TERM 5694 4375522 - 4375503 - f 81 -2.1 -5.52986 | overlap 4375504 ATGCGATTAAAAAAA CTCATCG TCGCGC CGATGAT TGACGTCAATGCTAT EcSMS35_4275 4375972 - 4376190 + | CopG family protein EcSMS35_4276 4376433 - 4376651 + | hypothetical protein fdhE 4377909 - 4376980 - | formate dehydrogenase accessory protein FdhE TERM 5695 4377857 - 4377838 - G 86 -10.7 -3.97307 | opp_overlap 4377835 4377838 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG TERM 5696 4377838 - 4377857 + g 70 -10.7 -2.71325 | opp_overlap 4377838, overlap 4377835 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4378541 - 4377906 - | formate dehydrogenase-O, gamma subunit fdoH 4379440 - 4378538 - | formate dehydrogenase-O, iron-sulfur subunit TERM 5697 4378849 - 4378860 + g 70 -5.8 -4.28018 | overlap 4378846 GCTCCGCCACGCGCT CGCT CGCC AGCG TTTTCATCGACTCTT TERM 5698 4379255 - 4379230 - G 73 -11.3 -2.78798 | gap 1, opp_overlap 4379230, overlap 4379229 4379232 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA TERM 5699 4379230 - 4379255 + g 85 -11.3 -3.61715 | gap 1, opp_overlap 4379230 4379229 4379232 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA fdoG 4382503 - 4379453 - | formate dehydrogenase-O, major subunit, selenocysteine-containing TERM 5700 4381476 - 4381498 + g 74 -7.7 -4.02022 | GCGAAGCCGTTTTCG TCCAGCTCG TAGGT CCAGCTGGA TTTATCGTACTTGCG TERM 5701 4382047 - 4382057 + g 77 -8.2 -4.10657 | AGCGGTTAACAGTCA CGCC TTC GGCG TTTTGCGCAATGTAG TERM 5702 4382744 - 4382729 - gH 82 -7.6 -4.46617 | AAAAGAAATCGAAAA TGTGAC AAGT GTCACA GGTGTTCGTCAAATT EcSMS35_4281 4382507 - 4382761 + | hypothetical protein fdhD 4382730 - 4383533 + | formate dehydrogenase accessory protein FdhD TERM 5703 4383567 - 4383539 - Tf 74 -5.9 -4.59982 | opp_overlap 4383541, overlap 4383541 TCATAATTAAAGAAA TACCGCAATTCTG ATT CTGGATTGCGGTT TTATTTTTCTATTAA TERM 5704 4383541 - 4383565 + TF 100 -10.7 -5.40873 | opp_overlap 4383541 4383539 ATAATTAAAGAAATA CCGCAATTCTG ATT CTGGATTGCGG TTTTATTTTTCTATT TERM 5705 4383565 - 4383541 - Tf 76 -8.5 -3.89787 | opp_overlap 4383541, overlap 4383539 ATAATTAAAGAAATA CCGCAATTCTG ATT CTGGATTGCGG TTTTATTTTTCTATT EcSMS35_4283 4383852 - 4383727 - | hypothetical protein TERM 5706 4384670 - 4384694 + GH 70 -3.6 -4.59109 | CGCAACCTACGGCAC CAGCGATA ACCGCAACC TGTCGCTG TTTTTGCGCGGTATG TERM 5707 4385072 - 4385083 + GH 72 -7.2 -4.09511 | overlap 4385070 TCATATTCTGTTAAG CCGC GACG GCGG TTTTGAAGAGATGTT EcSMS35_4284 4383843 - 4385678 + | hypothetical protein TERM 5708 4385990 - 4385977 - g 75 -5.3 -4.67943 | opp_overlap 4385977, overlap 4385970 CGGGAAGAGACAAAA GATTG CCCA CAATC TATCTGCGTTACCCA TERM 5709 4387223 - 4387213 - g 86 -6.8 -4.91109 | TGGGCAGCACAAAAA CAGG AAG CCTG GGATCGACAGCTGGA EcSMS35_4285 4385680 - 4387986 + | hypothetical protein TERM 5710 4388032 - 4388044 + F 71 -4.8 -4.46775 | opp_overlap 4388032 4388034, overlap 4388036 AGCGGGTAATTAAAA TCGC TTCCT GCGA TTTATATTTTAAGTC TERM 5711 4388036 - 4388066 + F 100 -13.5 -3.64487 | opp_overlap 4388032 4388034, overlap 4388032 4388063 GGTAATTAAAATCGC TTCCTGCGATTTA TATTT TAAGTCGCAGGAA TTATTCGGAGTGTGA EcSMS35_4286 4388181 - 4389236 + | putative lipoprotein TERM 5712 4389292 - 4389260 - T 80 -10.5 -3.86015 | opp_overlap 4389252, overlap 4389261 4389264 GATTTTGGTGATAAA TGCAGTGTCGGATGC GGC GCATCCGACACAGTT CACCCCTTGTGAAGT TERM 5713 4389291 - 4389261 - T 87 -14 -2.91395 | opp_overlap 4389252, overlap 4389260 4389264 ATTTTGGTGATAAAT GCAGTGTCGGATGC GGC GCATCCGACACAGT TCACCCCTTGTGAAG TERM 5714 4389288 - 4389264 - T 100 -18.7 -2.70354 | opp_overlap 4389252, overlap 4389261 4389260 TTGGTGATAAATGCA GTGTCGGATGC GGC GCATCCGACAC AGTTCACCCCTTGTG EcSMS35_4287 4391040 - 4389292 - | putative PTS system, IIA component TERM 5715 4390127 - 4390117 - G 72 -8.2 -3.85539 | opp_overlap 4390118 4390119, overlap 4390118 CAGACTCATATCAAA GGCC GCA GGCC AGGCGGCTTTCAGGT TERM 5716 4390601 - 4390579 - G 75 -4.9 -4.87291 | CAGCGGAATTAAAAA CGGATCTTT GCGTA AAAGATTCG CCAGCAAAATAATGC TERM 5717 4390692 - 4390676 - G 71 -2.1 -4.99035 | opp_overlap 4390676 4390678 4390687, overlap 4390678 CTAGCGAGACAAAAA CCGCGTT CAT AGCGCTG TTTCAGGCGGGGCAG TERM 5718 4390867 - 4390896 + g 85 -11.4 -3.66356 | GATTTCCAGCTGATA GCCCGCGTTGCC ACTGGC GGAAATGCGGGC TTTGCCGTTAAGGGT EcSMS35_4288 4392110 - 4391040 - | aminopeptidase EcSMS35_4289 4393557 - 4392100 - | PTS system, fructose-specfic family, IIBC component TERM 5719 4393139 - 4393129 - G 74 -8.2 -3.97947 | overlap 4393112 GCCACCGATGACAAA CGGC AGC GCCG CAGAAACACCCGCCA EcSMS35_4290 4394008 - 4393562 - | PTS system, fructose family, IIA component TERM 5720 4394187 - 4394174 - H 88 -3.9 -5.4833 | opp_overlap 4394174 4394175 TCAGTGAATAAAAAA TCATT ATTT AATGA TGTTGTGAATGTTTA TERM 5721 4394810 - 4394795 - g 84 -7.6 -4.66163 | opp_overlap 4394794 4394795 ATGGCGATTTAAAAA TCTACG GCGA CGTAGA ATTTAATATGGATGC rafY2 4394485 - 4395879 + | glycoporin RafY TERM 5722 4395884 - 4395916 + T 77 -11.2 -2.71144 | opp_overlap 4395884 ACTTCTTCTGATGAA GGCGCGGTGCTGGA TATTT TCCGGCACCGCAAC TCATTAAGGCAGGTA TERM 5723 4395916 - 4395884 - T 81 -11.2 -3.14211 | opp_overlap 4395884 ACTTCTTCTGATGAA GGCGCGGTGCTGGA TATTT TCCGGCACCGCAAC TCATTAAGGCAGGTA rhaU 4396234 - 4395920 - | L-rhamnose 1-epimerase rhaD 4397068 - 4396244 - | rhamnulose-1-phosphate aldolase TERM 5724 4397115 - 4397146 + r 70 -10 -2.60615 | opp_overlap 4397125, overlap 4397114 4397131 GATGCACGACCCGTA GGCCGGATAAGGCG CTCG CGCCGCATCCGGCA GTGTTTACCCACGCT rhaA 4398410 - 4397151 - | L-rhamnose isomerase TERM 5725 4397642 - 4397626 - G 74 -10.1 -3.53444 | TCAGTCGGGTGGAAA TGCCCGG CGT CCAGGCA CAGCGCCGTCTGGCG rhaB 4399876 - 4398407 - | rhamnulokinase EcSMS35_4296 4399955 - 4400104 + | hypothetical protein rhaS 4400164 - 4401000 + | HTH-type transcriptional activator RhaS rhaR 4400984 - 4401922 + | transcriptional activator RhaR rhaT 4402953 - 4401919 - | L-rhamnose-proton symporter sodA 4403238 - 4403858 + | superoxide dismutase (Mn) TERM 5726 4403914 - 4403859 - T 73 -4.9 -4.61482 | gap 2, overlap 4403882 4403912 GCGGCGAAAAAATAA TCATTTGCTGCCTGCTGCAATGAGGCG TTTA CGCCGCATTGCAGCTTA-AA-AAATGA ACCATCGCCAACGGC EcSMS35_4301 4404015 - 4403887 - | hypothetical protein TERM 5727 4403938 - 4403912 - G 81 -5 -5.0538 | opp_overlap 4403916, overlap 4403859 4403916 TTGCAGCTTAAAAAA TGAACCATCGCC AAC GGCGGTGGTTTT TTTGTGATCAATTTC TERM 5728 4403934 - 4403916 - G 81 -10.2 -3.93769 | opp_overlap 4403916, overlap 4403912 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5729 4403916 - 4403934 + g 100 -12.4 -5.67063 | opp_overlap 4403916 4403912 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5730 4403995 - 4403981 - G 73 -3.6 -4.86001 | ATGATCCGATAAAAA TAAAAC AGT GTTTCA AATGGTGTGGTTTTG TERM 5731 4404157 - 4404146 - g 72 -5.8 -4.42386 | opp_overlap 4404150 4404152 GCTCGATTGAGAAAA TCCC GGGG GGGA TGATGCTCGTCCCGC kdgT 4404112 - 4405101 + | 2-keto-3-deoxygluconate transporter TERM 5732 4405125 - 4405148 + F 100 -13.2 -3.93038 | CCTTAATCCCCACAG CCGGATGAAC TAAC GTTCGTCCGG TTTGCTATTGAGCTC EcSMS35_4303 4405250 - 4405924 + | MOSC domain-containing protein TERM 5733 4405962 - 4405948 - T 76 -10 -3.30124 | opp_overlap 4405951, overlap 4405951 GTGTAGGCCTGATAA GACGCT ATC AGCGTC GCATCAGGCATCCTG TERM 5734 4406038 - 4406022 - T 81 -12.3 -2.57344 | opp_overlap 4406022, overlap 4406021 TATCCTGCCTACAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC TERM 5735 4406022 - 4406038 + T 90 -12.3 -3.28712 | opp_overlap 4406022 4406021 TATCCTGCCTACAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC cpxA 4407402 - 4406029 - | sensor histidine kinase CpxA TERM 5736 4406686 - 4406676 - G 70 -6.8 -4.05389 | overlap 4406681 GAGAGATATCAGAAA GCAG ACG CTGC TGAGAGGTCATCATG cpxR 4408097 - 4407399 - | transcriptional regulatory protein CpxR cpxP 4408244 - 4408747 + | periplasmic protein CpxP TERM 5737 4408788 - 4408806 + T 100 -14.6 -5.96219 | CACCATCCCTGTCTT CCCCCACA TGA TGTGGGGG TTTTTTTTATCAATC EcSMS35_4307 4409913 - 4408933 - | phage integrase family site specific recombinase cox 4410429 - 4410701 + | regulatory protein Cox TERM 5738 4410841 - 4410818 - g 81 -4.6 -5.14965 | gap 1, overlap 4410836 4410837 ATCCGCACCAAAAAA CAGAGTCCGTT AAA AAAGG-CTCTG ACCTTTCTGAAAAGC EcSMS35_4309 4410704 - 4410874 + | hypothetical protein EcSMS35_4310 4410880 - 4411371 + | putative replication gene B protein TERM 5739 4411507 - 4411524 + G 71 -3.3 -4.83722 | gap 1, opp_overlap 4411488 AGAACCGAAGCACAG GC-CGACG CAG CGACGCGC TTTTCTTCTCATCTT EcSMS35_4311 4411435 - 4411659 + | hypothetical protein TERM 5740 4411705 - 4411726 + G 72 -6.6 -4.28067 | opp_overlap 4411705 ATAACGCCCTAAAAA TCGCCGTT ATGAAA AATGGCGA TTTGTCTCTTATTCA TERM 5741 4411726 - 4411705 - g 72 -4.4 -4.60255 | opp_overlap 4411705 ATAACGCCCTAAAAA TCGCCGTT ATGAAA AATGGCGA TTTGTCTCTTATTCA EcSMS35_4312 4411659 - 4411961 + | hypothetical protein EcSMS35_4313 4411961 - 4412185 + | C4-type zinc finger DksA/TraR family protein TERM 5742 4412301 - 4412280 - g 75 -5.7 -4.64657 | opp_overlap 4412279, overlap 4412270 TGAAAGCGGTAAAAA CGCCGGTCA GGAA TGGCTGGCG GTGGTTGGTTATTAC EcSMS35_4314 4412182 - 4412457 + | hypothetical protein TERM 5743 4412499 - 4412523 + G 100 -15.1 -3.35679 | CAGCATTTGCCGCAG GCACCGGTAAG ATG TTTACCGGTGC TTATGCATGGAACGC TERM 5744 4412567 - 4412603 + G 72 -5.8 -4.386 | opp_overlap 4412567 4412565, overlap 4412569 4412596 4412600 GTCGGGCGCGAAAGA CCCCTTACACGTGATG AGATG CGTCAGGTGCAAGGTG TTTTATCCACGATTA TERM 5745 4412686 - 4412698 + G 83 -6.2 -4.93877 | opp_overlap 4412686 4412685 CCGGCGCAATAAAAG CCCG GTGCA CGGG TTTTATTTCCTCACA TERM 5746 4413141 - 4413122 - g 73 -9.2 -3.61356 | opp_overlap 4413115, overlap 4413123 ATTAGTCAGCTTAAA GGCCAGCG TATG CGCTGGCA TGAGGCGTTACTGAT TERM 5747 4413140 - 4413123 - g 77 -12.7 -2.76492 | opp_overlap 4413115, overlap 4413122 TTAGTCAGCTTAAAG GCCAGCG TATG CGCTGGC ATGAGGCGTTACTGA TERM 5748 4413646 - 4413656 + G 91 -5.4 -5.37345 | opp_overlap 4413636 CGGAACGCCGCACTG GCAT ATG ATGC TTTTTTGTAATTCGC TERM 5749 4414299 - 4414287 - g 100 -10.5 -4.62069 | opp_overlap 4414294 CTTTGACTTTAAAAA GCGGC ATC GCCGC GCCTCGGAGTCCTGT EcSMS35_4315 4412447 - 4414732 + | replication gene A protein EcSMS35_4316 4414732 - 4415184 + | hypothetical protein EcSMS35_4317 4415378 - 4415256 - | hypothetical protein TERM 5750 4415433 - 4415395 - H 89 -11.7 -3.6336 | opp_overlap 4415395 GCAGACGATAGAGAA CGCCGCCAGTCGTGAAA CTTGT TTTCAGGGCTGGCGGGG TTGAATAACGAGTGT TERM 5751 4415395 - 4415433 + H 87 -13.9 -3.05935 | opp_overlap 4415395 GCAGACGATAGAGAA CGCCGCCAGTCGTGAAA CTTGT TTTCAGGGCTGGCGGGG TTGAATAACGAGTGT TERM 5752 4416165 - 4416149 - g 70 -6.5 -4.18161 | opp_overlap 4416149 4416163 TACAAATTTCCAAAA CCAACAC ATG GTGATGG TTTGACACCATATTC TERM 5753 4416518 - 4416539 + G 70 -10.1 -3.14881 | opp_overlap 4416515 GTAGGTAATGCAGTA CCGCCTCCA TTGT TTGAGGCGG TTGCTAGAAACCTTC EcSMS35_4319 4415633 - 4416571 + | DNA-cytosine methyltransferase family protein EcSMS35_4318 4417593 - 4416568 - | hypothetical protein EcSMS35_4320 4418803 - 4417598 - | hypothetical protein EcSMS35_4321 4418887 - 4419048 + | hypothetical protein TERM 5754 4419081 - 4419066 - T 100 -11.8 -5.00884 | opp_overlap 4419064 4419078 ACGGGGTGTAAAAAA GCCGCC CGCA GGCGGC GATGTTCAGCCGTTG EcSMS35_4322 4420121 - 4419087 - | PBSX family phage portal protein TERM 5755 4419294 - 4419308 + g 100 -7.8 -5.27779 | GTGCGCGTCCAGCAG GTCAGC GGC GCTGGC TTTTTTGATATTAAA TERM 5756 4419506 - 4419519 + g 70 -5.2 -4.33105 | CGTACATGATATATC CGGC ATGAGC GCCG TTTTCGTAATACTTG TERM 5757 4420083 - 4420099 + g 74 -6.5 -4.55016 | overlap 4420085 GGCGGTCATTTTTTT TGCCGCA GGT TGCGGTG TTTTCCCTTTTTTCT TERM 5758 4420085 - 4420097 + g 76 -9.1 -3.85072 | overlap 4420083 CGGTCATTTTTTTTG CCGCA GGT TGCGG TGTTTTCCCTTTTTT EcSMS35_4323 4421893 - 4420121 - | phage large terminase subunit GpP TERM 5759 4421925 - 4421899 - H 81 -11.6 -3.14051 | overlap 4421897 TGATGGTCATGAATA CCTCGCCGTG ATGAATA CACGGCAAGG CTACTGAGTCGCGCC TERM 5760 4422224 - 4422235 + G 77 -5.8 -4.63542 | overlap 4422211 ATCTGCGAGGCATCC TGCC TGAC GGCA TTTTTAAACGTTATG TERM 5761 4422894 - 4422880 - g 88 -11.4 -3.72893 | overlap 4422884 CAGCGCCGCAGCAAA GCCACC GGC GGTGGC GGTGACGCCCTGATG EcSMS35_4324 4422067 - 4422921 + | phage capsid scaffolding protein GpO TERM 5762 4423081 - 4423070 - g 74 -3 -5.0133 | GATGTGTCGAAAAAA TTCA CCGT TGAA CCGTCGGTCACCCAG EcSMS35_4325 4422980 - 4424053 + | phage major capsid protein GpN EcSMS35_4326 4424057 - 4424800 + | phage small terminase subunit GpM TERM 5763 4425245 - 4425257 + G 78 -9.1 -3.90328 | overlap 4425255 GCCGTGTGTGCGATG GCGAC CGC GTCGC TTTATGAGCGTTATC EcSMS35_4327 4424900 - 4425409 + | phage head completion protein GPL EcSMS35_4328 4425409 - 4425612 + | phage tail protein GpX EcSMS35_4329 4425616 - 4425897 + | phage holin GpY EcSMS35_4330 4425897 - 4426394 + | phage lysozyme TERM 5764 4426619 - 4426645 + G 70 -4.4 -4.57073 | gap 1, overlap 4426621 4426621 CTGCCGCCGGAATCG CTG-GCCGTGA AGATTG TCACGGCGCTG TTTTTGCAGCCGGTG EcSMS35_4331 4426409 - 4426834 + | phage lysis protein LysA EcSMS35_4332 4426822 - 4427247 + | phage lysis timing protein LysB TERM 5765 4427320 - 4427296 - gf 74 -9.9 -3.31144 | overlap 4427297 CCGGCAGCTTGAGAA CGCGCTGGCAC GCT GTGCCAGCCAG GTAAAAATGATTAAA TERM 5766 4427318 - 4427297 - gf 74 -10.9 -2.58544 | gap 1, overlap 4427296 CGGCAGCTTGAGAAC GCGCTGGCAC GCT GTGCCAGC-C AGGTAAAAATGATTA EcSMS35_4333 4427102 - 4427392 + | phage lysis protein LysC TERM 5767 4427502 - 4427492 - gf 70 -6.8 -4.13767 | GCTGTCATTTGAAAA GCGT TAC ACGC TCAATGTCATTGTGA EcSMS35_4334 4427355 - 4427822 + | phage tail completion protein GpR EcSMS35_4335 4427815 - 4428267 + | phage virion morphogenesis protein GpS TERM 5768 4428301 - 4428329 + T 78 -10.3 -3.65426 | opp_overlap 4428300 4428303, overlap 4428293 4428303 TGATGCGCAATTAAG CATTGAGCGGCCG TGC TGGTCGCTCAATA TTTAGAGGTTTATGA TERM 5769 4428327 - 4428303 - T 72 -10 -2.84276 | opp_overlap 4428301 4428293 4428303, overlap 4428300 ATGCGCAATTAAGCA TTGAGCGGCC GTGCT GGTCGCTCAA TATTTAGAGGTTTAT TERM 5770 4428303 - 4428327 + T 95 -12.9 -3.40173 | opp_overlap 4428303 4428300, overlap 4428301 4428293 ATGCGCAATTAAGCA TTGAGCGGCCG TGC TGGTCGCTCAA TATTTAGAGGTTTAT EcSMS35_4336 4429124 - 4428339 - | hypothetical protein EcSMS35_4337 4429208 - 4429843 + | phage baseplate assembly protein GpV EcSMS35_4338 4429840 - 4430187 + | baseplate assembly protein GPW EcSMS35_4339 4430192 - 4431100 + | baseplate assembly protein GpJ TERM 5771 4431221 - 4431175 - g 79 -2.1 -5.22039 | gap 1, overlap 4431176 CGGAAATTGAAAAAA CGCCGGTCAG-TATTCGTGAGC TGTG GAACCCGGATACCTGTCCGGCA AATCTGCTGCCGTGG EcSMS35_4340 4431093 - 4431623 + | phage tail protein GpI EcSMS35_4341 4431634 - 4433655 + | putative phage tail fiber protein EcSMS35_4342 4433657 - 4434184 + | tail fiber assembly protein GpG TERM 5772 4434931 - 4434917 - g 74 -2.9 -5.00846 | GAAACAGCATAAAAA TTGTT ACTGG AACAA GTACTGTAACGTGGT EcSMS35_4343 4434400 - 4435299 + | hypothetical protein EcSMS35_4344 4435599 - 4435462 - | hypothetical protein TERM 5773 4435496 - 4435514 + g 100 -10.2 -5.08878 | opp_overlap 4435491 4435496 GTACAAATCAGGACA GGCGGGCG AAT TGCCTGCC TTTTCTTTATCTGTT EcSMS35_4345 4435619 - 4436809 + | phage tail sheath protein EcSMS35_4346 4436822 - 4437340 + | phage major tail tube protein FII EcSMS35_4347 4437397 - 4437672 + | phage tail protein E EcSMS35_4348 4437705 - 4437824 + | phage tail protein P2 TERM 5774 4437947 - 4437937 - g 88 -5.4 -5.19879 | CGGGAAACACAAAAA TCAC TGC GTGA GCTGAACGGTCAGGC TERM 5775 4438576 - 4438562 - g 81 -12.8 -3.21395 | overlap 4438560 AGCTCGGCGACAATA CCGCCG CCT CGGCGG ATGATGCGGCCGGTG TERM 5776 4438867 - 4438854 - g 79 -4.5 -5.00884 | ACCTGTGGCAAAAAA TGCCG GTGT CAGCA TTGAAGAAACCGCCG TERM 5777 4439110 - 4439088 - g 75 -4.7 -4.83615 | overlap 4439070 4439068 4439067 4439066 CAGTTTTGAGAAAAA CCGGCTCGG TACTG CCCAGCAGG CTGAATACATGAAAA TERM 5778 4439609 - 4439629 + G 72 -9.7 -3.28791 | overlap 4439614 TTATTAGCTGGCCGG TTGTGGCCG TGG TGGCCGCAA TTGTCGCCGGGGCGT EcSMS35_4349 4437817 - 4440264 + | TP901 family phage tail tape measure protein gpU 4440279 - 4440758 + | phage protein gpU TERM 5779 4441715 - 4441697 - g 74 -8.8 -3.89614 | opp_overlap 4441696 4441695 GCGAAGTGGGATAAA CTGCAACG GGG CGTTGCGG AGTTCTCCATCATCC EcSMS35_4351 4440758 - 4441921 + | phage late control gene D protein EcSMS35_4352 4442003 - 4442221 + | phage transcriptional activator, Ogr/Delta TERM 5780 4442249 - 4442278 + T 88 -9.3 -4.59109 | opp_overlap 4442250, overlap 4442251 CCCCTCAGTTGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5781 4442277 - 4442250 - T 86 -12.8 -3.16564 | opp_overlap 4442249 4442251 CCCTCAGTTGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 5782 4442251 - 4442276 + T 100 -16.3 -3.90762 | opp_overlap 4442250, overlap 4442249 CCTCAGTTGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG EcSMS35_4353 4443588 - 4442260 - | IS4 transposase TERM 5783 4443621 - 4443596 - H 100 -9.8 -5.61596 | opp_overlap 4443596 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 5784 4443596 - 4443621 + H 75 -9.1 -3.61398 | opp_overlap 4443596 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 5785 4443672 - 4443689 + H 79 -6.9 -4.59342 | opp_overlap 4443653, overlap 4443673 TAACTGATCGGCATT ACCCCTC AGTT GAGGGGC TTTATTTATGGTCGA TERM 5786 4443673 - 4443688 + H 76 -10.4 -3.34882 | opp_overlap 4443653, overlap 4443672 AACTGATCGGCATTA CCCCTC AGTT GAGGGG CTTTATTTATGGTCG TERM 5787 4443789 - 4443807 + G 100 -14.6 -5.9873 | CACCATCCCTGTCTT CCCCCACA TGA TGTGGGGG TTTTTTTTATCCTCA EcSMS35_4354 4443760 - 4443882 + | hypothetical protein TERM 5788 4444421 - 4444435 + G 72 -10 -3.30106 | overlap 4444420 4444418 4444428 GTCCTGGTACGGCTG GCATCG CGC CGATGC TCTGTTTGCATTGGG fieF 4443897 - 4444799 + | cation-efflux pump FieF TERM 5789 4445038 - 4445008 - g 76 -11.1 -3.28712 | opp_overlap 4445033, overlap 4445033 TCGGTGTGTTGACAA GCGGCGGTGATGC GCCAG GCATGAACGCCGC AATTCGCGGGGTTGT TERM 5790 4445636 - 4445625 - g 93 -5.8 -5.22039 | overlap 4445627 4445628 GCGAAAGGTAAAAAA CACG CGAT CGTG GCGATTACCGAACAT pfkA 4444980 - 4445942 + | 6-phosphofructokinase TERM 5791 4446024 - 4445998 - f 77 -5 -4.96646 | overlap 4445999 TGACAGAAGCAAAAA TGCCTGATGCGC TTC GCTTATCAGGCC TACATGAATTCTGCA TERM 5792 4446023 - 4445999 - f 72 -8.5 -3.56903 | overlap 4445998 GACAGAAGCAAAAAT GCCTGATGCGC TTC GCTTATCAGGC CTACATGAATTCTGC TERM 5793 4446128 - 4446144 + F 91 -9.4 -4.7497 | opp_overlap 4446128 4446125 TTGTCAGCAATATGA GGCGGA TTTCT TCCGCC TTTTTAATCCCTCAA TERM 5794 4447034 - 4447018 - g 84 -3.6 -5.24129 | overlap 4447020 4447029 GTGGTCGAGAAAAAA GGCACC AAAGA GGTGGC GGAAGCCTACCTGAA sbp 4446262 - 4447251 + | sulfate-binding protein TERM 5795 4447274 - 4447296 + F 100 -6.9 -5.72622 | opp_overlap 4447274 AGGATAATTATCAAA CCCGGTGGT TTCTC GCGACCGGG TTTTTTATTTGTCAC cdh 4447358 - 4448113 + | CDP-diacylglycerol pyrophosphatase TERM 5796 4448158 - 4448136 - T 100 -13.5 -3.6187 | overlap 4448132 AGTTAAGGAAAGTAA GTGCCGGAT ATGAA ATCCGGCAC CTGTCAGACTTAAGC tpiA 4448935 - 4448168 - | triosephosphate isomerase EcSMS35_4360 4449642 - 4449043 - | hypothetical protein TERM 5797 4449635 - 4449622 - G 88 -2.3 -5.53436 | ATATAAGAGAAAAAA CAGCG TACA CCCTG GCTTCATTGACAGTA EcSMS35_4361 4449743 - 4450183 + | hypothetical protein TERM 5798 4450211 - 4450258 + F 87 -13.8 -2.84566 | gap 1, overlap 4450208 CTCTTACTGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAGTGACAATGCCCGGAAAA TCCTTCTGAACTCTT EcSMS35_4362 4450395 - 4450694 + | hypothetical protein TERM 5799 4450913 - 4450891 - g 76 -10.8 -3.41024 | opp_overlap 4450885, overlap 4450886 4450889 CCCTGCAACAGAAGA TATTCTTCAA TTG TTGAAGAATA AGTCGGATAACAAGC TERM 5800 4450986 - 4450970 - g 70 -3.6 -4.66537 | overlap 4450965 4450972 TGGCCGAAGACAAAA CTGCGT ATTGA ACGCGG AGAAATGCCGGAAAC uspD 4450721 - 4451149 + | universal stress protein D fpr 4451900 - 4451154 - | ferredoxin--NADP(+) reductase TERM 5801 4451180 - 4451220 + g 72 -10.3 -3.35224 | overlap 4451178 GCTCCGCTGTCATAT GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC TCTTTCAGCAACTGT TERM 5802 4451624 - 4451610 - G 70 -5.7 -4.33417 | TTCATCCAGAACAAA GAAGC CAGCT GCTTC GCTAACCACCTGCAC TERM 5803 4451976 - 4451955 - R 100 -13.1 -5.7946 | CTCCGAACAAAAAAA TTCCAGTCC CGAA GGACTGGAA GGCTCAATCGATCAA glpX1 4453007 - 4451997 - | fructose-1,6-bisphosphatase, class II TERM 5804 4452900 - 4452918 + g 81 -5.9 -4.83169 | ACGCATGGCGTTTAC CGCTGCG CCGTC CGCGGTG TTTTTATCGCCGCGT glpK 4454650 - 4453142 - | glycerol kinase TERM 5805 4453170 - 4453183 + g 74 -3.1 -5.02074 | gap 1, overlap 4453161 TCTTCCCACGCCATC GCGCGT TTC AC-CGC TTTTTTCCAGCCTGC TERM 5806 4453624 - 4453634 + g 72 -6.8 -4.25074 | opp_overlap 4453624, overlap 4453632 CCGGAACCACATACA CACC ATT GGTG TTTTGCACTTTCGTG glpF 4455518 - 4454673 - | glycerol uptake facilitator protein TERM 5807 4456069 - 4456053 - g 74 -2.9 -5.01858 | GAAAGAAAAAAACAA CTCACTG TCG CAGGAAG TTCAAAATGCCCAGC EcSMS35_4368 4455943 - 4456188 + | hypothetical protein TERM 5808 4456201 - 4456222 + T 91 -7.9 -5.28481 | overlap 4456204 TAATCTCTTCCATGC AGAGGCGCC GCAA GGCGCCTTA TTTTTTACTTCACTG TERM 5809 4456204 - 4456219 + T 100 -11.8 -4.72473 | overlap 4456201 TCTCTTCCATGCAGA GGCGCC GCAA GGCGCC TTATTTTTTACTTCA EcSMS35_4369 4456943 - 4456227 - | hypothetical protein EcSMS35_4370 4457650 - 4456976 - | hypothetical protein TERM 5810 4457456 - 4457466 + g 74 -2.4 -5.03409 | opp_overlap 4457456 AGTGCCGCGAATAAA GCTG TGG CTGC TTCTTTTTTTTATCG TERM 5811 4457673 - 4457689 + r 86 -10.9 -4.09685 | opp_overlap 4457673 TCCATGTATAAAAAA GGGGAAT TTA ATTCCCC TTTTAACGCATGGCA TERM 5812 4457689 - 4457673 - R 100 -10.9 -5.28176 | opp_overlap 4457673 TCCATGTATAAAAAA GGGGAAT TTA ATTCCCC TTTTAACGCATGGCA rraA 4458195 - 4457710 - | regulator of ribonuclease activity A menA 4459226 - 4458288 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5813 4459250 - 4459233 - R 93 -9.1 -5.06816 | opp_overlap 4459220, overlap 4459220 ACGCGCCAATAAAAA TGGGGCC TTTC AGCCCCA TCAAACAATGATGAA hslU 4460612 - 4459281 - | heat shock protein HslVU, ATPase subunit HslU TERM 5814 4459781 - 4459745 - G 74 -10.1 -3.53012 | CGTGTTTGGTGGAAA CAGTGCAACCTTCTACC AGC GGCAGCAGGTCACGCTG AACGCCTTCACGAGA hslV 4461152 - 4460622 - | ATP-dependent protease HslV TERM 5815 4461207 - 4461188 - R 100 -13.6 -4.05991 | overlap 4461175 4461181 AATACAGAGTACAAA CCCCGTAC AAAA GTACGGGG CATAATGCAATTATA ftsN 4462204 - 4461245 - | cell division protein FtsN TERM 5816 4461661 - 4461672 + g 70 -5.8 -4.21974 | overlap 4461671 GCGACGTACGCGTCT GCTG CTGC CAGC TTTGTTCAGTCGTAC TERM 5817 4461754 - 4461776 + g 70 -11.2 -2.71011 | overlap 4461748 4461759 GGCGCTGTAGCGTTT GCTGACGCTG TTC CGGCGTCTGC TCATTCCACGGAACT cytR 4463321 - 4462296 - | transcriptional repressor CytR priA 4465675 - 4463477 - | primosomal protein N' rpmE 4465878 - 4466090 + | 50S ribosomal protein L31 TERM 5818 4466110 - 4466123 + T 100 -9.5 -5.64274 | opp_overlap 4466110 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA TERM 5819 4466123 - 4466110 - T 93 -9.5 -5.02074 | opp_overlap 4466110 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA EcSMS35_4379 4466759 - 4466151 - | hypothetical protein TERM 5820 4466807 - 4466785 - R 73 -2.6 -5.1675 | gap 1, opp_overlap 4466785 4466783 CCATGTATGAAAAAA GCGGC-TGG TTAACT CCGCGCCGC TCTTTTCCGCTTTAG metJ 4467136 - 4466819 - | met repressor TERM 5821 4467747 - 4467772 + G 78 -8.3 -4.24342 | opp_overlap 4467752, overlap 4467717 4467750 TGTTCGACAGTCTGG CAAAACGCGGT TGCT ATCGCGTGTTG TTTGTTGATCAAGGC metB 4467413 - 4468573 + | O-succinylhomoserine (thiol)-lyase TERM 5822 4470308 - 4470295 - g 76 -8.1 -4.1711 | ATCAGCGCCAACAAA CTGGC GGGA GCCAG CGACAGCAATAAATA metL 4468576 - 4471008 + | aspartokinase/homoserine dehydrogenase II TERM 5823 4471020 - 4471045 + G 100 -16.3 -3.34962 | opp_overlap 4471020 4471025, overlap 4471025 GTAGTGATTATTGAA CAAAAGCTGGC AGTT GCCAGCTTTTG TTGTCACCTCTAAAC TERM 5824 4471045 - 4471020 - g 100 -16.3 -3.10164 | opp_overlap 4471020 4471025, overlap 4471025 GTAGTGATTATTGAA CAAAAGCTGGC AGTT GCCAGCTTTTG TTGTCACCTCTAAAC TERM 5825 4471025 - 4471040 + G 100 -10.4 -4.78237 | opp_overlap 4471025 4471020, overlap 4471020 GATTATTGAACAAAA GCTGGC AGTT GCCAGC TTTTGTTGTCACCTC TERM 5826 4471040 - 4471025 - g 95 -10.4 -4.69053 | opp_overlap 4471020 4471025, overlap 4471020 GATTATTGAACAAAA GCTGGC AGTT GCCAGC TTTTGTTGTCACCTC TERM 5827 4471060 - 4471078 + G 90 -14.6 -2.88389 | opp_overlap 4471060, overlap 4471057 4471054 GTTGTCACCTCTAAA CCACCTCC TGC GGAGGTGG TGATTGATTGTCATT TERM 5828 4471078 - 4471060 - g 100 -14.6 -3.57144 | opp_overlap 4471060 4471057 4471054 GTTGTCACCTCTAAA CCACCTCC TGC GGAGGTGG TGATTGATTGTCATT TERM 5829 4471109 - 4471127 + G 72 -4.5 -4.66537 | TTGCCTTTGGTCAGT GCCCC GGTAATAAG GGGGC TTTTGTGTTGAGCGA EcSMS35_4383 4471015 - 4471158 + | hypothetical protein tsx2 4472085 - 4471225 - | nucleoside-specific channel-forming protein Tsx TERM 5830 4472120 - 4472154 + r 100 -7.3 -6.01369 | opp_overlap 4472123, overlap 4472121 4472123 TTGTTGATTTAGAGA AAATAATGCCATTCA GTGAA TGAATGGCATTATAA TTTTTTTATTATTTG TERM 5831 4472121 - 4472153 + r 88 -10.8 -4.17161 | opp_overlap 4472123, overlap 4472120 4472123 TGTTGATTTAGAGAA AATAATGCCATTCA GTGAA TGAATGGCATTATA ATTTTTTTATTATTT TERM 5832 4472123 - 4472151 + r 100 -13.4 -3.62312 | opp_overlap 4472123, overlap 4472121 4472120 TTGATTTAGAGAAAA TAATGCCATTCA GTGAA TGAATGGCATTA TAATTTTTTTATTAT TERM 5833 4472151 - 4472123 - R 100 -13.4 -4.55287 | opp_overlap 4472123 4472121 4472120 TTGATTTAGAGAAAA TAATGCCATTCA GTGAA TGAATGGCATTA TAATTTTTTTATTAT EcSMS35_4385 4473782 - 4472163 - | serine/threonine protein phosphatase family protein TERM 5834 4472733 - 4472753 + g 85 -3.2 -5.4505 | overlap 4472734 TGATTCACCCACTGG TTGGCGTA CAATA TCCGCCAG TTTTTTATTCCAGCC EcSMS35_4386 4475373 - 4473823 - | serine/threonine protein phosphatase family protein TERM 5835 4474384 - 4474346 - G 70 -6.7 -4.02817 | gap 1 CCGGTAGAAGAAGAA CTGCCATACTCACGT-GT TAAA ACTACGGGAGAATGGCCG ACAACTTCCTGTGTT TERM 5836 4474970 - 4474989 + g 72 -4.3 -4.70319 | opp_overlap 4474970, overlap 4474977 TCGGTGTAGTAAATA TTTCCCA GCAGAA TGGGGAA TTTTGCTTTTGATAA TERM 5837 4475151 - 4475170 + g 100 -2.2 -6.11243 | overlap 4475151 AATAGTCGCCTGCAT CAAAGA AAAAGACA TCTTTG TTTTTTTTCTTCGCT EcSMS35_4387 4476733 - 4475606 - | hypothetical protein TERM 5838 4475886 - 4475904 + g 74 -6 -4.51812 | opp_overlap 4475886 AAATGCCAGGGAATA TCAGCG TTACGGT CGCTGA TTTCTTCTTCTACGA EcSMS35_4388 4476866 - 4478419 + | serine/threonine protein phosphatase family protein TERM 5839 4479313 - 4479282 - g 73 -3.7 -4.86621 | gap 1 ACCCGGAAGCAAAAA GCG-CTCAGGCGGA TTTGC TCAACCTGAAACGC AAAGTCGATGCCGGA metF 4478801 - 4479691 + | 5,10-methylenetetrahydrofolate reductase TERM 5840 4479766 - 4479804 + F 70 -10.4 -2.60392 | overlap 4479763 4479768 4479777 GCTGCCTCGAAATGA GGGCGGGAAAATAAGGTT GTC AGCCTTGTTTTCTCCCTC ATTACTTGAAGGATA TERM 5841 4479768 - 4479802 + F 70 -9.4 -2.84098 | overlap 4479766 4479763 4479777 TGCCTCGAAATGAGG GCGGGAAAATAAGGTT GTC AGCCTTGTTTTCTCCC TCATTACTTGAAGGA katG 4480020 - 4482200 + | catalase/peroxidase HPI TERM 5842 4482210 - 4482242 + F 100 -25.1 -4.41616 | CTGTAATCTGACCTT CTTCAGCGACTGCCT TTC AGGCAGTCGCTGAAG TTTCTTTACCGGCGT TERM 5843 4482690 - 4482701 + G 77 -7.2 -4.53398 | TTCGCGATTCTGATT GCCG CTTT CGGC TTATTTTTGGTGTTG EcSMS35_4391 4482294 - 4483199 + | putative transporter EcSMS35_4392 4483841 - 4483224 - | hypothetical protein TERM 5844 4484003 - 4483971 - R 70 -9.8 -2.88861 | gap 1, opp_overlap 4483982, overlap 4483961 GATTACTGGCACAGA GTGCCGGATGCGGCG TGAA CGCCTTATCCGGC-C TACAAAAGCACGCAA TERM 5845 4484074 - 4484115 + r 77 -9.6 -3.65201 | gap 1, opp_overlap 4484086, overlap 4484079 4484086 AGCGCATCAGGCAAT TTTGCGTTCAAACTCCCGG ACAAG CCGGGAGTTTGGA-GTAGG TTATTCCCACTCTTG TERM 5846 4484079 - 4484111 + r 81 -12.8 -2.65808 | opp_overlap 4484086, overlap 4484074 4484086 ATCAGGCAATTTTGC GTTCAAACTCCCGG ACAAG CCGGGAGTTTGGAG TAGGTTATTCCCACT TERM 5847 4484104 - 4484086 - R 88 -11.7 -3.53343 | opp_overlap 4484079 4484074 4484086 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT TERM 5848 4484086 - 4484104 + r 89 -11.7 -3.62418 | opp_overlap 4484086, overlap 4484079 4484074 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT gldA 4485219 - 4484116 - | glycerol dehydrogenase fsaB 4485892 - 4485230 - | fructose-6-phosphate aldolase 2 TERM 5849 4485407 - 4485395 - G 71 -9.1 -3.53091 | ACGCGGCGTTTTAAA GCTGG CTG CCAGC ACCATGCTTTCTGGC ptsA 4488405 - 4485904 - | multi-phosphoryl transfer protein 2 TERM 5850 4486841 - 4486854 + g 90 -4.5 -5.45802 | overlap 4486842 TTACGTAGTTGCTGT TTGGC TTCT GCCAG TTTTTCTTTTACCCA TERM 5851 4488249 - 4488260 + g 72 -7.2 -4.19506 | opp_overlap 4488249 TATCGGTGCCAATCA GCGC AAGG GCGC TTTTGGCGTTGCCCT EcSMS35_4396 4488714 - 4489793 + | PTS system, fructose family, IIC component EcSMS35_4397 4489808 - 4490128 + | PTS system, fructose family, IIB component TERM 5852 4490137 - 4490154 + F 95 -14.1 -3.27525 | overlap 4490132 CGCTTAAGTTCTTAT CCCGCCC GTAA GGGCGGG TTCGCTTTCCCACAG TERM 5853 4490910 - 4490925 + GF 77 -9 -3.8512 | opp_overlap 4490899 4490898 TAAGCCGCAGACGTT CTGGCA GGCG TGCCAG TTATTCTGGTACATG EcSMS35_4398 4490179 - 4492476 + | formate C-acetyltransferase 2 TERM 5854 4492486 - 4492511 + GF 70 -6.7 -4.14392 | opp_overlap 4492488, overlap 4492487 CTGTAACGTTGTGGA AACGCGCCGCA ATGA TGTGGCGCGCA TTTTCAACATTCAGC TERM 5855 4492487 - 4492510 + GF 73 -10.2 -3.08314 | opp_overlap 4492488, overlap 4492486 TGTAACGTTGTGGAA ACGCGCCGCA ATGA TGTGGCGCGC ATTTTCAACATTCAG TERM 5856 4492509 - 4492488 - gf 85 -11.5 -3.54459 | opp_overlap 4492487 4492486 GTAACGTTGTGGAAA CGCGCCGCA ATGA TGTGGCGCG CATTTTCAACATTCA TERM 5857 4492838 - 4492850 + GF 85 -3.4 -5.40072 | overlap 4492831 GTGTTAATGCAGGCG GAGT TTGCT ACTC TTTTTTTACAGCGGC EcSMS35_4399 4492442 - 4493320 + | glycyl-radical activating family protein EcSMS35_4401 4493322 - 4493663 + | PTS system, fructose family, IIB component EcSMS35_4400 4494501 - 4493650 - | AraC family transcriptional regulator TERM 5858 4494154 - 4494178 + g 74 -6.3 -4.52347 | opp_overlap 4494137 4494134, overlap 4494148 4494150 AATGCGCGGGCCGCG TCGGGCGACGT GTT GCTTCGCCAGA TTTTGATATTGTTTG TERM 5859 4494575 - 4494555 - R 91 -7.6 -5.1861 | gap 1, overlap 4494539 GGCATTATGAAAAAA GGCCAC-CT GAAA AGTGTGGCC TGAGGGGAGTTCGAT TERM 5860 4494637 - 4494609 - R 74 -11 -2.63479 | overlap 4494599 4494598 4494623 4494625 AACATTGCGACAGTA TCGCATCCGGCA AATAG CGCCAGACGCGA TACAAAGGTCATTTA EcSMS35_4402 4496383 - 4494650 - | putative sulfatase TERM 5861 4496331 - 4496315 - G 75 -4.3 -4.84033 | opp_overlap 4496325, overlap 4496318 AGAGAAAAACCAAAA GTAGAGC AGT GCCCAAC CCAGGGCTTTCCAGC TERM 5862 4496548 - 4496527 - R 100 -13.7 -4.41206 | opp_overlap 4496527 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGGAGAGGAA TERM 5863 4496527 - 4496548 + r 85 -11.5 -3.53012 | opp_overlap 4496527 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGGAGAGGAA ppc 4499217 - 4496566 - | phosphoenolpyruvate carboxylase TERM 5864 4496639 - 4496649 + g 70 -4.6 -4.5448 | TCGACGCGAGGATCC GGCT CAT GGCC TTCTTTTTCTGCCTG TERM 5865 4497771 - 4497782 + g 70 -3.6 -4.62069 | GGTGGACAGCCAGTA CGTC GGAC GGCG TTTTTGCCATCGAGA TERM 5866 4499469 - 4499502 + r 72 -8.1 -3.94188 | opp_overlap 4499479 4499481, overlap 4499470 AACACCAAAGGTGTA GGTCGGATAAGATGC GCAA GCATCGCATCCGACA TTGTTTGGCCTACGT TERM 5867 4499470 - 4499501 + r 78 -11.6 -2.96031 | opp_overlap 4499479 4499481, overlap 4499469 ACACCAAAGGTGTAG GTCGGATAAGATGC GCAA GCATCGCATCCGAC ATTGTTTGGCCTACG argE 4500670 - 4499519 - | acetylornithine deacetylase TERM 5868 4500748 - 4500730 - H 71 -2.4 -5.14163 | ATTTATGAATAAAAA TACACTAA CGT TGAGCGTA ATAAAACCCACCAGC argC 4500824 - 4501828 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 5869 4502108 - 4502095 - g 71 -2.3 -4.90525 | GAACGGCAAATAAAA CCCTG CTGG CATGG GCGAAGAAACATCAG argB 4501839 - 4502612 + | acetylglutamate kinase argH 4502673 - 4504046 + | argininosuccinate lyase TERM 5870 4504071 - 4504089 + F 76 -5.9 -4.82901 | TATGTATTAATTTGA GCCTGGC TTATC GCTGGGC TTTTTATGGCAAAAA TERM 5871 4504127 - 4504109 - f 100 -11 -6.09133 | TATGGCAAAAAAAAA GCGGATCC TGG AGATCCGC AAAAGTTCACGTTGG oxyR 4504313 - 4505230 + | hydrogen peroxide-inducible genes activator sthA 4506613 - 4505213 - | soluble pyridine nucleotide transhydrogenase TERM 5872 4506993 - 4506979 - g 100 -2.7 -6.01725 | opp_overlap 4506988 AACAAAAAGAAAAAA CCCGC CGTTC GCTGG TGGAAGCCGCATTTA TERM 5873 4507575 - 4507561 - g 73 -4.2 -4.79752 | GTGAACAAGAGAAAA CCGCAA TTA TTCCGG GAAATGTGAAGGACG fabR 4506891 - 4507595 + | fatty acid biosynthesis regulator TERM 5874 4507790 - 4507803 + G 73 -3.7 -4.77567 | GTAGGCTTGCCGGGT CTGGC AGCT GCCTG TTTTATTCTCGGCGT EcSMS35_4411 4507595 - 4507954 + | putative inner membrane protein TERM 5875 4507960 - 4507991 + T 100 -15.2 -4.41494 | overlap 4507961 4507962 TGCTGAGTAATCGGT ATCATGCCGGATGC TGAT GCATCCGGCATGGG TTTTACTTCGCGGTC TERM 5876 4507961 - 4507990 + T 100 -18.7 -3.24414 | overlap 4507960 4507962 GCTGAGTAATCGGTA TCATGCCGGATGC TGAT GCATCCGGCATGG GTTTTACTTCGCGGT TERM 5877 4507962 - 4507989 + T 100 -20 -2.54166 | overlap 4507961 4507960 CTGAGTAATCGGTAT CATGCCGGATGC TGAT GCATCCGGCATG GGTTTTACTTCGCGG trmA 4509094 - 4507994 - | tRNA (uracil-5-)-methyltransferase TERM 5878 4510926 - 4510908 - g 70 -10.2 -3.16055 | opp_overlap 4510907 4510906 GAAAGCGCGGATTAA GGGGGTCG AGG CGACCGCC AATTTTGATACCGGA btuB 4509463 - 4511307 + | TonB-dependent vitamin B12 receptor TERM 5879 4511315 - 4511350 + F 100 -14 -3.41125 | gap 1, opp_overlap 4511312, overlap 4511317 CCTTCTGAACCACGT CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG TTGTCGGTCTATGAC TERM 5880 4512050 - 4512098 + G 85 -10.4 -4.18094 | gap 1, opp_overlap 4512047 4512050, overlap 4512051 GAAGCTGAACAATTA TTGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCAG TTTTAGGCTGATTTG TERM 5881 4512051 - 4512097 + G 75 -11.7 -3.10134 | gap 1, opp_overlap 4512050 4512047, overlap 4512050 AAGCTGAACAATTAT TGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCA GTTTTAGGCTGATTT murI 4511321 - 4512109 + | glutamate racemase TERM 5882 4514093 - 4514080 - f 74 -6.7 -4.41177 | overlap 4514084 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5883 4514319 - 4514295 - f 72 -8 -3.93061 | gap 1, opp_overlap 4514302 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5884 4514873 - 4514861 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5885 4516175 - 4516164 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5886 4517362 - 4517341 - f 76 -8.7 -3.91196 | opp_overlap 4517358 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TGAAACAGAATTTGC TERM 5887 4517503 - 4517537 + F 100 -15.9 -2.91395 | gap 1, opp_overlap 4517499 4517509, overlap 4517509 CAGGCATCAAATTAA GC-AGAAGGCCCAGTC GGAA GACTGGGCCTTTTTGC GTTTCTACAAACACT TERM 5888 4517509 - 4517530 + F 100 -15.9 -4.84529 | opp_overlap 4517499 4517509, overlap 4517503 TCAAATTAAGCAGAA GGCCCAGTC GGAA GACTGGGCC TTTTTGCGTTTCTAC TERM 5889 4517530 - 4517509 - f 100 -15.9 -3.58914 | opp_overlap 4517509 4517503, overlap 4517499 TCAAATTAAGCAGAA GGCCCAGTC GGAA GACTGGGCC TTTTTGCGTTTCTAC murB 4517629 - 4518657 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 5890 4519022 - 4519043 + G 74 -8.7 -3.90766 | opp_overlap 4519021, overlap 4519012 CCGGGGTCGGAAATG GTTTTCGCC TTTT GGCGCAAAC TTATATTTGTCGATG birA 4518654 - 4519619 + | bifunctional protein BirA TERM 5891 4519643 - 4519622 - Tf 80 -10.1 -3.80746 | overlap 4519620 4519624 TGCGGAAAAATAAGA TAGGGGAGC ATTA GCTCCCCTG AAAATTATTTGCGTA TERM 5892 4519641 - 4519624 - Tf 93 -12.7 -3.47868 | overlap 4519622 4519620 CGGAAAAATAAGATA GGGGAGC ATTA GCTCCCC TGAAAATTATTTGCG coaA 4520598 - 4519648 - | pantothenate kinase EcSMS35_4423 4520581 - 4520775 + | hypothetical protein TERM 5893 4521200 - 4521188 - fH 74 -7.7 -4.15222 | opp_overlap 4521184 ACCGGCTCGAATAAA GAGAG CTT CTCTC GATATTCAGTGCAGA TERM 5894 4521562 - 4521546 - g 70 -4.4 -4.4715 | gap 1, opp_overlap 4521546 TTTGAACGTACAAAA CCGCACG TTAA CGT-CGG TACTATCGGCCACGT tuf1 4521516 - 4522700 + | translation elongation factor Tu TERM 5895 4522764 - 4522723 - f 89 -14.5 -3.0792 | opp_overlap 4522724 4522735, overlap 4522735 TAACATTTGACGCAA TGCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGCT TTCGTACCAGAACCT TERM 5896 4522724 - 4522763 + F 100 -13.6 -3.72576 | opp_overlap 4522723 4522735, overlap 4522735 AACATTTGACGCAAT GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC TTTCGTACCAGAACC TERM 5897 4522752 - 4522735 - f 93 -11.3 -4.2679 | opp_overlap 4522724 4522735, overlap 4522723 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5898 4522735 - 4522752 + F 100 -11.3 -4.60924 | opp_overlap 4522735 4522723, overlap 4522724 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5899 4523133 - 4523122 - g 70 -4.4 -4.5442 | opp_overlap 4523122 CTGTTAACGACAAAA GGTA AAGC TACC GTTGCTTTTGCCCGT TERM 5900 4523222 - 4523236 + G 73 -11.4 -2.65264 | CCACGCTGATTGTGG CTGCGG TTA CCGCAG TAATGTCACTGATCC secE 4522930 - 4523313 + | preprotein translocase subunit secE nusG 4523315 - 4523860 + | transcription termination/antitermination factor NusG TERM 5901 4523895 - 4523877 - f 73 -3 -5.1675 | CCAGCGATCAAAAAA GCGGCGAT TTA ATCGTTGC ACAAGGCGCGAGATT TERM 5902 4523895 - 4523933 + F 100 -16.9 -4.8543 | opp_overlap 4523900, overlap 4523900 4523931 GCGATTTAATCGTTG CACAAGGCGCGAGATTG GAATA CAATTTCGCGCCTTTTG TTTTTATGGGCCTTG TERM 5903 4523900 - 4523928 + F 100 -15.4 -5.35224 | opp_overlap 4523900, overlap 4523895 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5904 4523928 - 4523900 - f 95 -13.2 -3.30159 | opp_overlap 4523900 4523895 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5905 4523931 - 4523960 + F 95 -7.3 -5.36441 | gap 1, overlap 4523895 4523934 ACAATTTCGCGCCTT TTGTTTTTATGGGC CTT GCCCGTA-AAACGA TTTTTTATATCACGG TERM 5906 4524343 - 4524320 - g 77 -8.2 -4.13343 | gap 1, overlap 4524312 ACAAAGTGGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4524019 - 4524447 + | ribosomal protein L11 TERM 5907 4524994 - 4524954 - g 74 -3.1 -4.98255 | opp_overlap 4524962 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4524451 - 4525155 + | ribosomal protein L1 rplJ 4525447 - 4525944 + | ribosomal protein L10 rplL 4526011 - 4526376 + | ribosomal protein L7/L12 TERM 5908 4526416 - 4526441 + F 100 -17.7 -4.64766 | opp_overlap 4526409 4526407 4526406, overlap 4526387 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5909 4527512 - 4527491 - g 81 -6.5 -4.87665 | gap 1, opp_overlap 4527490 GTGTACGTAGAAAAA GGC-CGCCGT ATT ACTGCGCGCC ATATTCGCCAGCTGG TERM 5910 4529738 - 4529722 - g 86 -6.5 -5.10033 | overlap 4529723 CGAAGAGAAACAAAA TCAGCTG GAA CAGCTGG CTGAGCAGTATGACG TERM 5911 4529737 - 4529723 - g 77 -10 -3.64393 | overlap 4529722 GAAGAGAAACAAAAT CAGCTG GAA CAGCTG GCTGAGCAGTATGAC TERM 5912 4530626 - 4530616 - g 74 -3.2 -4.91459 | overlap 4530604 TAAGATGTATAAAAA CATC GTG GACG GCAACCATCAGATGG rpoB 4526696 - 4530724 + | DNA-directed RNA polymerase, beta subunit TERM 5913 4530743 - 4530772 + F 73 -9.2 -3.4252 | opp_overlap 4530761, overlap 4530744 TCGCTCAAACAGGTC ACTGCTGTCGGG GTAAAA CCCGGCAGCGGA TTGTGCTAACTCCGA TERM 5914 4530744 - 4530771 + F 81 -12.7 -2.65298 | opp_overlap 4530761, overlap 4530743 CGCTCAAACAGGTCA CTGCTGTCGGG GTAAAA CCCGGCAGCGG ATTGTGCTAACTCCG TERM 5915 4532141 - 4532157 + G 72 -7.9 -3.87373 | opp_overlap 4532130 4532140 4532137 CGAAGGTAAAGCTAT CCAGCTG CAC CCGCTGG TTTGTGCGGCATATA TERM 5916 4532636 - 4532652 + G 78 -7.9 -4.40561 | CTGCTACCGCATTCT CGGTCTG AAA CCGACCG TTATTTTTGCGGACC rpoC 4530801 - 4535024 + | DNA-directed RNA polymerase, beta' subunit TERM 5917 4535064 - 4535051 - T 91 -9.5 -4.8384 | opp_overlap 4535051 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT TERM 5918 4535051 - 4535064 + T 100 -9.5 -5.65177 | opp_overlap 4535051 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT thiH 4536399 - 4535266 - | thiazole biosynthesis protein ThiH thiG 4537211 - 4536396 - | thiazole biosynthesis protein ThiG TERM 5919 4536640 - 4536679 + gr 75 -9.2 -3.61356 | opp_overlap 4536632 4536635, overlap 4536632 4536631 4536641 4536672 TCGACAACCACCGGA ACCGTGGCTTGCTGGATA ATAA TCTCCAGCATGGCACGGG TTTCCAGTCCCTGAT TERM 5920 4536641 - 4536678 + gr 82 -12.7 -2.76492 | opp_overlap 4536632 4536635, overlap 4536632 4536631 4536640 4536672 CGACAACCACCGGAA CCGTGGCTTGCTGGATA ATAA TCTCCAGCATGGCACGG GTTTCCAGTCCCTGA thiS 4537368 - 4537168 - | thiamine biosynthesis protein ThiS TERM 5921 4537216 - 4537194 - G 72 -4.9 -4.70626 | CAATAACTTGAAAAA GCAGGAT CTGGTCGCC ATCCTGC ACGATATGTTGCGCC thiF 4538107 - 4537352 - | thiazole biosynthesis adenylyltransferase ThiF thiE 4538735 - 4538100 - | thiamine-phosphate pyrophosphorylase thiC 4540630 - 4538735 - | thiamine biosynthesis protein ThiC rsd 4541339 - 4540863 - | regulator of sigma D TERM 5922 4541491 - 4541455 - g 75 -4.3 -4.78149 | opp_overlap 4541454, overlap 4541458 4541460 CGTATAATTGAAAAA TTAGATCACGGCTGGTG GGT CGTCAGCCATGAACAAA AATTATGGTTGCCGA nudC 4541434 - 4542207 + | NADH pyrophosphatase TERM 5923 4542365 - 4542380 + G 74 -6 -4.56358 | opp_overlap 4542362, overlap 4542366 AATATAAAGCCACGC GCGCCC AGGC GGGCGA TTTTATGTCGCTGTG TERM 5924 4542414 - 4542402 - g 74 -6.2 -4.56597 | GTCGCTGTGCAAAAA CGCC GAGCT GGCG TGCGAAGTGACTTTG hemE 4542247 - 4543311 + | uroporphyrinogen decarboxylase TERM 5925 4543408 - 4543396 - g 72 -7.7 -3.89822 | overlap 4543398 GATCGACTCGATAAA GATCC GCC GGATC TGATCGCCGGAGCCG TERM 5926 4543730 - 4543720 - g 71 -2.4 -5.00616 | opp_overlap 4543720 GGCGTGGCGAAAAAA CGGC TCT GCGG TAAATTCGAACCGCT nfi 4543321 - 4543992 + | endonuclease V EcSMS35_4447 4544035 - 4544625 + | hypothetical protein hupA 4544812 - 4545084 + | DNA-binding protein HU-alpha TERM 5927 4545130 - 4545115 - f 76 -10.4 -3.35639 | opp_overlap 4545115 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC TERM 5928 4545115 - 4545130 + F 91 -10.4 -4.84918 | opp_overlap 4545115 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC EcSMS35_4449 4545157 - 4545792 + | hypothetical protein zraP 4546213 - 4545794 - | zinc resistance-associated protein EcSMS35_4451 4546344 - 4546216 - | hypothetical protein TERM 5929 4546316 - 4546343 + g 90 -7.8 -4.81083 | gap 1, opp_overlap 4546316 ATAAACGAGTAAAAA TGACTCGCCTGCT GCG GGTAG-CGAGTCA TTTTTACTCATTGAA TERM 5930 4546343 - 4546316 - G 81 -6.2 -4.85267 | opp_overlap 4546316 ATAAACGAGTAAAAA TGACTCGCCTGC TGCG GGTAGCGAGTCA TTTTTACTCATTGAA zraS 4546451 - 4547827 + | sensor histidine kinase ZraS TERM 5931 4549100 - 4549073 - g 90 -10.4 -4.4009 | opp_overlap 4549073 CGGCACTGGAGAAAA CGGGCGGCAACA AAAC CGAAGCCGCCCG TCAGTTAGGGATCAC zraR 4547824 - 4549149 + | response regulator ZraR purD 4550435 - 4549146 - | phosphoribosylamine--glycine ligase TERM 5932 4549254 - 4549227 - G 77 -11.3 -3.15249 | opp_overlap 4549234, overlap 4549234 GATATCGGTCATTAA GGCATAAGCGC GTTTCT GCGCTTCTGCC ACGGTATGACCCAGC purH 4552036 - 4550447 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 5933 4552108 - 4552067 - H 100 -20.5 -2.96216 | opp_overlap 4552102 4552104, overlap 4552069 4552104 TTTGACTATTACAGA GAGCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGCCC CTAACGGGGCATCCT TERM 5934 4552106 - 4552069 - H 100 -19.5 -3.03443 | opp_overlap 4552102 4552104, overlap 4552067 4552104 TGACTATTACAGAGA GCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGC CCCTAACGGGGCATC TERM 5935 4552153 - 4552171 + H 74 -2.4 -5.20783 | opp_overlap 4552151, overlap 4552157 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTCTTTCAAT EcSMS35_4456 4552154 - 4552276 + | hypothetical protein TERM 5936 4552440 - 4552426 - f 76 -4.2 -5.0916 | opp_overlap 4552426, overlap 4552427 4552434 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5937 4552472 - 4552460 - f 72 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 5938 4554264 - 4554251 - f 74 -6.7 -4.41177 | overlap 4554255 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5939 4554490 - 4554466 - f 72 -8 -3.93061 | gap 1, opp_overlap 4554473 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5940 4555044 - 4555032 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGTGA GGGG AGTGAAAAAGAACCT TERM 5941 4556345 - 4556334 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5942 4557532 - 4557511 - f 76 -8.7 -3.91196 | opp_overlap 4557528 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TGAAACAGAATTTGC TERM 5943 4557679 - 4557698 + F 100 -13.6 -4.74103 | opp_overlap 4557679 TCAAATTAAGCGAAA GGCCATCC GTCA GGATGGCC TTTTTGCATTGGCGC TERM 5944 4557698 - 4557679 - f 100 -13.6 -3.83214 | opp_overlap 4557679 TCAAATTAAGCGAAA GGCCATCC GTCA GGATGGCC TTTTTGCATTGGCGC TERM 5945 4557755 - 4557722 - f 87 -6 -5.24129 | opp_overlap 4557729, overlap 4557723 TTGGCGCAGAAAAAA TGCCGGATGC-GACGC TGGC GCGTCTGC-TCCAGCT TACGCAGGCACGATA TERM 5946 4557754 - 4557723 - f 79 -9.5 -3.73995 | opp_overlap 4557729, overlap 4557722 TGGCGCAGAAAAAAT GCCGGATGC-GACGC TGGC GCGTCTGC-TCCAGC TTACGCAGGCACGAT EcSMS35_4464 4558033 - 4558344 + | IS3 family transposase orfA TERM 5947 4558353 - 4558371 + F 71 -8.9 -3.33087 | ACGATAGTTTCCAGA CTGAGTG ACAGC CACTCAG TTGTCAGCCTCTGTT EcSMS35_4465 4558464 - 4559210 + | IS3 family transposase orfB metA 4559649 - 4560578 + | homoserine O-succinyltransferase TERM 5948 4560624 - 4560639 + F 100 -10.4 -5.63517 | CAGCACCTTACCTCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4560847 - 4562448 + | malate synthase A TERM 5949 4562682 - 4562667 - g 77 -3.2 -5.0538 | GGCGAGTCGAAAAAA GGCTAC ATCA ACAGCC TCGGTGCACTGACTG aceA 4562478 - 4563782 + | isocitrate lyase TERM 5950 4564247 - 4564268 + G 79 -3.6 -5.09895 | GTTGCCGGATTACCC GCGCTTCG AGATTG CGGAGAGC TTTTTTAACTCCGTG TERM 5951 4564303 - 4564326 + G 88 -5.2 -5.20783 | overlap 4564304 GTCGGTTATTTGACC ACCGCTCG CTTACTCC CGAGCGGC TTTTTATCTTTAGCT TERM 5952 4565182 - 4565167 - g 90 -6.8 -5.07053 | opp_overlap 4565178 AAGCAGCGGAAAAAA TCACCG ATCT CGGCGA ACAAATTGTGATTCG aceK 4563966 - 4565690 + | isocitrate dehydrogenase kinase/phosphatase iclR 4566531 - 4565707 - | acetate operon repressor IclR TERM 5953 4566555 - 4566569 + H 77 -3.6 -5.30348 | overlap 4566544 CCTTTTTCTGCATCG TGGAAA TCA TTTTCA TTTTTATTGTTAGCT TERM 5954 4567884 - 4567868 - g 72 -6.5 -4.41237 | overlap 4567870 ATCAAAGAAGAGAAA TACAGCG AGG CGCTGGA TGTGGCGCGTCAGCA TERM 5955 4567882 - 4567870 - g 76 -9.1 -3.79177 | overlap 4567868 CAAAGAAGAGAAATA CAGCG AGG CGCTG GATGTGGCGCGTCAG TERM 5956 4568413 - 4568423 + G 75 -5.4 -4.62622 | overlap 4568388 ACTGATTTCCGGCGG CGTT TCT AACG TTTCTTTCTCATTCC metH 4566731 - 4570414 + | methionine synthase TERM 5957 4570443 - 4570473 + F 85 -10.4 -4.29106 | opp_overlap 4570447, overlap 4570445 4570447 CACTTTTCCTTACAA CAAACAGGGCGCTC AAT GAGTGCCCTGTCTC TTTATTAATATGAAA TERM 5958 4570445 - 4570471 + F 100 -13 -3.7456 | opp_overlap 4570447, overlap 4570443 4570447 CTTTTCCTTACAACA AACAGGGCGCTC AAT GAGTGCCCTGTC TCTTTATTAATATGA TERM 5959 4570447 - 4570469 + F 100 -15.6 -3.44527 | opp_overlap 4570447, overlap 4570445 4570443 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5960 4570469 - 4570447 - f 100 -13.4 -4.30719 | opp_overlap 4570447 4570445 4570443 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 5961 4572002 - 4572014 + G 71 -3.3 -4.84311 | overlap 4571997 CTCAGTAATTTAAAA CTGGC AAT GTCGG TTTTCTTCTCTGGCG TERM 5962 4572182 - 4572199 + G 70 -4.1 -4.68384 | TTACTGGGAGATATG CAGCG TCTGAACT CGCTG TTTTGTTCGGTGGCT pNaS 4570634 - 4572265 + | inorganic phosphate transporter, sodium-dependent TERM 5963 4572348 - 4572328 - T 85 -11.2 -3.45742 | opp_overlap 4572327 4572328, overlap 4572326 GCACGATGAACAAGA TGCCGGAT CATGC ATCCGGCA ATTCATTTAAAAACG TERM 5964 4572328 - 4572348 + T 77 -11.2 -2.70525 | opp_overlap 4572328 4572326, overlap 4572327 GCACGATGAACAAGA TGCCGGAT CATGC ATCCGGCA ATTCATTTAAAAACG pepE 4573044 - 4572355 - | dipeptidase E EcSMS35_4475 4573979 - 4573167 - | putative shikimate 5-dehydrogenase TERM 5965 4573366 - 4573355 - G 73 -3.6 -4.82667 | CCACGACATCAAAAA CGAC GCTT GCCG TTGAGACCATCGCTT EcSMS35_4476 4575201 - 4573972 - | L-sorbose 1-phosphate reductase TERM 5966 4574111 - 4574124 + g 71 -2.3 -5.00616 | AGCGGCAGATATTTC CCGGT ATAC ACCAG TTTTTTCCCGCCGCC TERM 5967 4574998 - 4575039 + g 95 -6 -5.4588 | overlap 4575002 ATCGCCGCAAAATTC GTGGCCGATGATGATGG-GA TTGG TCGCCA-CATCGTCGGGTAC TTTTTTATGGTTTTC EcSMS35_4477 4576077 - 4575253 - | PTS system mannose/fructose/sorbose family IID subunit EcSMS35_4478 4576885 - 4576088 - | PTS system mannose/fructose/sorbose family IIC subunit TERM 5968 4576282 - 4576263 - G 74 -2.8 -4.91852 | CCGAGGAAAAAGAAA GGCATCAA ATAT TTCACGCC CATCATGCGAAGCAC TERM 5969 4576451 - 4576435 - G 72 -10.1 -3.36273 | overlap 4576431 GTGCCGGAATAGCAA CGCGCAG CGC CTGCACG CCAAGCGCGGAGACA EcSMS35_4479 4577445 - 4576951 - | PTS system mannose/fructose/sorbose family IIB subunit EcSMS35_4480 4577852 - 4577445 - | PTS system mannose/fructose/sorbose family IIA subunit TERM 5970 4577851 - 4577840 - G 71 -2.2 -5.00616 | CGTGGGCGCAAAAAA TGGC ATTG ACCA TAAAGCCTCCTTAGC EcSMS35_4481 4578668 - 4577862 - | sorbitol-6-phosphate 2-dehydrogenase sorC 4579685 - 4578738 - | sorbitol operon regulator SorC TERM 5971 4580860 - 4580840 - g 72 -4.5 -4.61527 | overlap 4580842 AAAACGGCGGAAAAA GGCGGTCGC CCG GCGTCCAAC GGTAAGCGTTTTACC rluF 4580033 - 4580905 + | ribosomal large subunit pseudouridine synthase F EcSMS35_4484 4581178 - 4580906 - | hypothetical protein TERM 5972 4581462 - 4581450 - R 85 -7.7 -4.72863 | TCAAATAAATTAAAA TGCAG CTT CTGCA CCACCTGCTCGGCAT lysC 4582780 - 4581431 - | aspartokinase III, lysine-sensitive TERM 5973 4583381 - 4583414 + G 100 -14.8 -4.93318 | gap 1, opp_overlap 4583377 4583374 AAATGAAAGACGTTA CGATCGCCGATCTTT TTGCT AAAGA-CGGCGATCG TTTTTCTAAGTTCTC pgi 4583305 - 4584954 + | glucose-6-phosphate isomerase TERM 5974 4585005 - 4584964 - f 79 -11.2 -3.04468 | gap 1, opp_overlap 4584975 4585002, overlap 4584975 GGTTAATTAAATAAC CCTAATAAAAA-TGCCGAC GTTAT GTCGGCATTTTTTATCAGA TAAATCCCCTTGTCT TERM 5975 4584975 - 4584993 + F 100 -11 -5.26316 | opp_overlap 4584964 4584975 TAACCCTAATAAAAA TGCCGACG TTA TGTCGGCA TTTTTTATCAGATAA TERM 5976 4584993 - 4584975 - f 93 -10.3 -5.10208 | opp_overlap 4584975, overlap 4584964 TAACCCTAATAAAAA TGCCGAC GTTAT GTCGGCA TTTTTTATCAGATAA EcSMS35_4487 4585308 - 4585550 + | hypothetical protein TERM 5977 4585619 - 4585640 + F 85 -11.7 -3.32343 | opp_overlap 4585622, overlap 4585622 TGAAGGGATTTACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5978 4585622 - 4585637 + F 77 -9 -3.80174 | opp_overlap 4585622, overlap 4585619 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT TERM 5979 4585637 - 4585622 - f 73 -9 -3.42699 | opp_overlap 4585622 4585619 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT EcSMS35_4488 4585664 - 4586302 + | hypothetical protein EcSMS35_4489 4586299 - 4587036 + | hypothetical protein TERM 5980 4587189 - 4587160 - g 72 -7.7 -4.00038 | gap 1, overlap 4587161 TAGGATTATTACAAA CGCCCACCGCGCGC ATG GCGCGGGAAGGG-G AGTTGAGCCTGAACT EcSMS35_4490 4587036 - 4589132 + | putative lipoprotein TERM 5981 4589144 - 4589171 + T 87 -8.5 -4.48713 | opp_overlap 4589144 CTAAGTCATGGGAAA GGTGCCAGT TTTCGCACTC ACTGGCACC TTTATTCTTAATGGC TERM 5982 4589171 - 4589144 - T 72 -8.5 -3.6215 | opp_overlap 4589144 CTAAGTCATGGGAAA GGTGCCAGT TTTCGCACTC ACTGGCACC TTTATTCTTAATGGC EcSMS35_4491 4589457 - 4589179 - | hypothetical protein TERM 5983 4589459 - 4589473 + r 71 -8.6 -3.5616 | AGGTTACGTTTCATT TGTTCC AGA GGAACA TTGTCGATTTTTCGC EcSMS35_4492 4589576 - 4589454 - | hypothetical protein TERM 5984 4589509 - 4589524 + g 91 -5.4 -5.45726 | GCTGGTGGCTGGGAA TCACCT GAAT GGGTGA TTTTTTTGGGCTGTG psiE 4589672 - 4590082 + | phosphate-starvation-inducible E TERM 5985 4590105 - 4590088 - T 100 -12.7 -5.52384 | GCGGGAGTAAAAAAA GGCGCTC CGTG GAGCGCC GAATAACAGTCACAA malG 4591066 - 4590176 - | maltose/maltodextrin ABC transporter, permease protein MalG malF 4592625 - 4591081 - | maltose/maltodextrin ABC transporter, permease protein MalF malE 4593969 - 4592779 - | maltose/maltodextrin-binding periplasmic protein MalE TERM 5986 4592985 - 4593000 + g 70 -4.6 -4.46072 | CGTAAGACTTCAGCG CCACTG CACC CAGCGG TTTATCTTTATTGAC TERM 5987 4594771 - 4594795 + G 75 -4.4 -4.7497 | gap 2, overlap 4594738 TGTGGCGATTGGCCG TACGCTGGTGGC CGA GCCA--AGCGTA TTTTTGCTCGATGAA TERM 5988 4595005 - 4595029 + G 72 -7.9 -3.97368 | gap 1 GGAGCTGTACCACTA TCCGGCAGAC CGTTTT GTC-GCCGGA TTTATCGGTTCGCCA malK 4594334 - 4595449 + | maltose/maltodextrin ABC transporter, ATP-binding protein MalK malB 4595521 - 4596861 + | maltose-inducible porin TERM 5989 4596931 - 4596885 - f 79 -12.1 -2.57132 | opp_overlap 4596884 4596885 4596921, overlap 4596872 4596871 4596884 4596911 4596912 CCTGGGCCGGATAAG GTGCTTGCGCCGCATCCGGCA ACCAA CGCCTGATGCGACGCTTGCGC GTCTTATCAGGCCTA TERM 5990 4596885 - 4596931 + F 77 -11.4 -2.5294 | opp_overlap 4596872 4596871 4596885 4596884 4596911 4596912, overlap 4596884 4596921 CCTGGGCCGGATAAG GTGCTTGCGCCGCATCCGGC AACCAAC GCCTGATGCGACGCTTGCGC GTCTTATCAGGCCTA TERM 5991 4596944 - 4596911 - f 74 -9.5 -3.34344 | opp_overlap 4596885 4596884 4596921 4596931, overlap 4596885 4596884 4596912 GCATCCGGCAACCAA CGCCTGATGCGACGC TTGC GCGTCTTATCAGGCC TACAACGGCTGTCAA TERM 5992 4596943 - 4596912 - f 84 -13 -2.60392 | opp_overlap 4596885 4596884 4596921 4596931, overlap 4596885 4596884 4596911 CATCCGGCAACCAAC GCCTGATGCGACGC TTGC GCGTCTTATCAGGC CTACAACGGCTGTCA TERM 5993 4596931 - 4596978 + F 88 -12.2 -3.53811 | opp_overlap 4596884 4596912 4596911 4596961 4596965 4596976, overlap 4596884 4596921 GATGCGACGCTTGCG CGTCTTATCAGGCCTACA ACGGCTGTCAAA TGTAGGCCGGATAAGGCG TTTGCGCCGCATCCG TERM 5994 4597000 - 4596961 - f 85 -11.4 -3.54638 | opp_overlap 4596931, overlap 4596965 4596976 ACAACGGCTGTCAAA TGTAGGCCGGATAAGGCG TTTG CGCCGCATCCGGCATAAA AACAGGTTGTCATTA TERM 5995 4596996 - 4596965 - f 79 -12.2 -2.64155 | opp_overlap 4596931, overlap 4596961 4596976 CGGCTGTCAAATGTA GGCCGGATAAGGCG TTTG CGCCGCATCCGGCA TAAAAACAGGTTGTC TERM 5996 4597036 - 4597023 - f 77 -9.5 -3.62096 | opp_overlap 4597018 4597023 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT TERM 5997 4597023 - 4597036 + F 70 -9.5 -2.97017 | opp_overlap 4597023, overlap 4597018 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT malM 4597104 - 4598024 + | maltose operon protein MalM TERM 5998 4598057 - 4598076 + F 100 -11.4 -5.71983 | opp_overlap 4598056 4598055 GATTTTGCAACAACT GGTGCGTC TCCT GGCGCACC TTTTTTTATGCTTCA TERM 5999 4598390 - 4598404 + G 77 -5.8 -4.70659 | overlap 4598364 AGAGATAACTTTATT TATATC AGT GATATA TTTTTAAATATAAAA TERM 6000 4598732 - 4598744 + G 71 -2.7 -4.82901 | TTTAAATGTCGACGT TTACA CAA TGTGA TTTTTATCAAAGCGA TERM 6001 4599213 - 4599171 - g 80 -5.2 -4.88407 | opp_overlap 4599170 TGATGCAATTAAAAA TTCTTAATATTGTTAATAAA AAC TTTATTGAGAATATGAAGAA AATATTTAGCCATTG EcSMS35_4500 4598294 - 4599832 + | hypothetical protein TERM 6002 4599875 - 4599844 - f 91 -9.4 -4.62054 | gap 1, opp_overlap 4599864 TTAAGTAAAGGAAAA CATCACCGTTCCTGG CAT CCTGGG-CGGTGATG CCCCTATGGTTGACC ubiC 4600055 - 4600552 + | chorismate lyase ubiA 4600565 - 4601437 + | 4-hydroxybenzoate polyprenyl transferase TERM 6003 4601467 - 4601450 - T 100 -11.3 -5.1101 | opp_overlap 4601450 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGCTGC TERM 6004 4601450 - 4601467 + T 93 -11.3 -4.32177 | opp_overlap 4601450 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGCTGC plsB 4604075 - 4601592 - | glycerol-3-phosphate acyltransferase TERM 6005 4601797 - 4601825 + g 72 -5.1 -4.58395 | ATACCGTGCAGCACG GAGAGACGTTGCG CGA CGGTGCGGCTCTC TTTTTCCAGCGTACC dgkA 4604186 - 4604554 + | diacylglycerol kinase lexA 4604664 - 4605272 + | LexA repressor TERM 6006 4605286 - 4605309 + F 100 -16 -4.94262 | AACATATCTCTGAGA CCGCGATGCC GCCT GGCGTCGCGG TTTGTTTTTCATCTC dinF 4605345 - 4606670 + | DNA-damage-inducible protein F TERM 6007 4606762 - 4606743 - f 73 -4.3 -4.77567 | opp_overlap 4606729 ACGTTCAGAAGAAAA GTGAACG TACTCT CATTCAC AACCTAACGATGAGG EcSMS35_4507 4606786 - 4606995 + | CsbD family protein zur 4607552 - 4607037 - | zinc uptake regulation protein TERM 6008 4607434 - 4607422 - G 71 -9.1 -3.49858 | TCAAGCAGATCATAA GCGCT GAT AGCGC CATCCTGCAGACTCA TERM 6009 4608207 - 4608222 + G 71 -2.6 -5.02323 | TGGATCGGGCGATTT TTCATT ACGC GATGAA TTTTGTTTGTAATCC TERM 6010 4608709 - 4608699 - g 80 -5.4 -5.02201 | AAAACATTACAAAAA TGCA GGC TGCA GGTGAGACTTTAATT EcSMS35_4509 4607870 - 4608874 + | hypothetical protein TERM 6011 4608937 - 4608916 - f 100 -11.7 -4.52857 | opp_overlap 4608916 AGTTTTTACATAAAA GAACCCAAT ATTG ATTGGGTTC TTTTTTCTCTATCAG TERM 6012 4608916 - 4608937 + F 100 -11.7 -5.4251 | opp_overlap 4608916 AGTTTTTACATAAAA GAACCCAAT ATTG ATTGGGTTC TTTTTTCTCTATCAG TERM 6013 4609092 - 4609106 + F 86 -7.2 -5.09259 | TGAGAGCTTCATGCC TTGAGA GGA TCTCAA TTTTCTTTTGCAATG dusA 4609254 - 4610273 + | tRNA-dihydrouridine synthase A TERM 6014 4610304 - 4610327 + F 100 -13.1 -4.43681 | opp_overlap 4610301 4610298 TAGTCAAATTCACCA CGCCCTGCG CACCGT CGCGGGGCG TTTTGCTGTTAAATC pspG 4610425 - 4610649 + | phage shock protein G TERM 6015 4610784 - 4610808 + T 91 -10 -4.77775 | opp_overlap 4610786, overlap 4610786 CGAACTATAAAAAGA AAGGGCTTCC CAGGT GGAAGCCCTA TTTCTTTTATGGAAT TERM 6016 4610806 - 4610786 - T 100 -12.6 -5.00267 | opp_overlap 4610784 4610786 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA TERM 6017 4610786 - 4610806 + T 100 -12.6 -3.99938 | opp_overlap 4610786, overlap 4610784 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA qor 4611798 - 4610815 - | quinone oxidoreductase TERM 6018 4611257 - 4611267 + g 88 -8.2 -4.59853 | overlap 4611256 4611262 GCGCCGGCTTTTAGC GCGC TCT GCGC TTTTTGCGCGGTTCC TERM 6019 4612233 - 4612216 - g 74 -3.3 -5.02074 | overlap 4612218 GGAGCTGTCAAAAAA TACGCCA AGTG CGGCGAA CATCAGTGCTTATGC TERM 6020 4612553 - 4612533 - g 100 -6.7 -5.80364 | opp_overlap 4612532 4612533 ATCTCAACAAAAAAA CCGCTGGCT TGC AGCCGTCGG ATTTGATCATCGTCG TERM 6021 4613229 - 4613204 - g 74 -8.9 -3.9281 | ATTATCGGTAAACAA CGTAACGGCCC AATC GGGACGGTACG CCTGACCTTTAACGG dnaB 4611881 - 4613296 + | replicative DNA helicase alr2 4613349 - 4614428 + | alanine racemase tyrB 4614681 - 4615874 + | aromatic-amino-acid transaminase TERM 6022 4615907 - 4615884 - T 100 -14.6 -3.79668 | ATGTAATGCAGGAAA GCAGGCTGGA GCTA CCCAGCCTGC AGTGAAATTAAACTG EcSMS35_4516 4616600 - 4616097 - | hypothetical protein TERM 6023 4617275 - 4617260 - g 86 -4 -5.40072 | GGCGCGGCAAAAAAA CCTTCT CGCC AGAAAG CGAAGATTATCTGAA aphA 4617001 - 4617714 + | class B acid phosphatase TERM 6024 4617715 - 4617749 + F 90 -4.3 -5.52384 | gap 2, opp_overlap 4617719, overlap 4617718 AATTCAGAATACTGA CAG-A-GCGGGAGAGCG TGA CACTCTCCCGAATGCTG TTTTTTTAATCACAC TERM 6025 4617743 - 4617719 - f 80 -12.1 -2.95894 | opp_overlap 4617718 4617715 CAGAATACTGACAGA GCGGGAGAGCG TGA CACTCTCCCGA ATGCTGTTTTTTTAA EcSMS35_4518 4617825 - 4618241 + | hypothetical protein TERM 6026 4618413 - 4618399 - g 74 -7.8 -4.07568 | overlap 4618377 4618402 CGGTTTCGCTGAAAA CCAGCC CGG AGCTGG CGGAGCTGCTACGTC EcSMS35_4519 4618245 - 4618601 + | hypothetical protein TERM 6027 4618628 - 4618610 - T 100 -12.4 -4.55128 | ACTCTGAAAGGAAAA GGCCGCTC AGA AAGCGGCC TTAACGATTACAGCA uvrA 4621458 - 4618636 - | excinuclease ABC, A subunit ssb2 4621713 - 4622249 + | single-stranded DNA-binding protein TERM 6028 4622341 - 4622319 - T 100 -13.5 -5.37345 | opp_overlap 4622322 GCCAACCATAAAAAA GAAGCCTCC GTTAT GGAGGCTTC TACATATCAAGTCAA TERM 6029 4622322 - 4622338 + T 76 -10.1 -3.39505 | opp_overlap 4622319 AACCATAAAAAAGAA GCCTCCG TTA TGGAGGC TTCTACATATCAAGT EcSMS35_4522 4622629 - 4622348 - | hypothetical protein TERM 6030 4622752 - 4622732 - H 76 -4.1 -5.1523 | opp_overlap 4622732 TGCAGAACACAAAAA TGAAACA CTCTTTT TGTTTCA TTGATTTTGTGAACT TERM 6031 4623461 - 4623471 + G 82 -2.4 -5.38047 | TCTATCTATTATTAC CGCG ATA CGCC TTTTTTCTCTGGCTA TERM 6032 4624145 - 4624155 + G 72 -6.8 -4.2828 | GTTTCTATTAACCTG TCGG CCT CCGA TTTTCATACGTCACG TERM 6033 4624642 - 4624613 - g 85 -12.9 -3.19389 | CAATGGATGGAGCAA TTACCCGCGCG GGAGTTAA CGCGCGGGCAA TAAAACTACAGGCGG EcSMS35_4523 4623059 - 4624645 + | cyclic diguanylate phosphodiesterase domain-containing protein soxS 4624971 - 4624648 - | regulatory protein SoxS soxR 4625057 - 4625521 + | redox-sensitive transcriptional activator SoxR TERM 6034 4625542 - 4625518 - T 100 -14.4 -4.78753 | opp_overlap 4625518 GGAAGATGAACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 6035 4625518 - 4625542 + T 100 -14.4 -4.67651 | opp_overlap 4625518 GGAAGATGAACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 6036 4625689 - 4625702 + T 71 -5.3 -4.57073 | GGCGTTTCTTCGCCA GTGTA AAAG TACAC TTTTTAGCCGCAATA EcSMS35_4526 4625837 - 4625724 - | hypothetical protein TERM 6037 4626234 - 4626222 - g 78 -10.5 -3.53811 | opp_overlap 4626231 GGCATGTTGGGTAAA GCGGG CTT CCCGC CTGCGGCAGTTTTCG EcSMS35_4527 4626066 - 4627415 + | sulfate permease family inorganic anion transporter TERM 6038 4627431 - 4627462 + F 100 -12.4 -4.37658 | opp_overlap 4627437, overlap 4627437 TCTTACATAGGATTC TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA TTTTCTCCGCACATT TERM 6039 4627437 - 4627456 + F 100 -9.2 -5.54907 | opp_overlap 4627437, overlap 4627431 ATAGGATTCTGAAAA CGGGTGGC AATG GCTGCCCG TTTTTATTTTCTCCG TERM 6040 4627716 - 4627733 + G 74 -2.7 -4.94672 | TTTGGTTTGCATGTG GAGTTTG ATCC TGAACTC TTTTTAGTCTTGTTT TERM 6041 4628091 - 4628117 + G 72 -7.4 -3.87815 | gap 1 ATGGGGACGATGATC TTC-ACCGTCG GTGGTG CGACGGTCGAA TTTATGAAAGTGGCC EcSMS35_4528 4627566 - 4629215 + | Na+/H+ antiporter TERM 6042 4629232 - 4629267 + T 100 -16.4 -3.16564 | opp_overlap 4629241, overlap 4629241 GCTTGGCGGTGTAAT CGGTAAAAAGGTGC AGTACATC GCACCTTTTTACCG TTGGTCAGGTGACCA TERM 6043 4629258 - 4629241 - T 73 -4.8 -4.62471 | opp_overlap 4629232 4629241 TGTAATCGGTAAAAA GGTGCA GTACAT CGCACC TTTTTACCGTTGGTC actP 4630946 - 4629297 - | cation/acetate symporter ActP TERM 6044 4630911 - 4630939 + g 72 -6 -4.33105 | gap 1 GTTAGCTGCGAAAGG GAG-TGTGGCGGC AAGC GCCGTCAGAACTC TTTTCATGATGCTTG EcSMS35_4530 4631257 - 4630943 - | hypothetical protein TERM 6045 4631179 - 4631194 + g 75 -5.4 -4.62783 | overlap 4631180 TAATCGACAGGATGG TGGCAA ACCG TTGCCG TTTTTCGACTAACTC TERM 6046 4631420 - 4631387 - R 74 -9.5 -3.34344 | opp_overlap 4631392, overlap 4631359 4631360 4631388 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAAATCGTTTCCG TERM 6047 4631419 - 4631388 - R 84 -13 -2.60392 | opp_overlap 4631392, overlap 4631359 4631360 4631387 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAAATCGTTTCC TERM 6048 4631392 - 4631410 + r 80 -11 -3.30124 | opp_overlap 4631360 4631388 4631387 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA acsA 4633428 - 4631470 - | acetate--CoA ligase TERM 6049 4632789 - 4632826 + g 81 -4.7 -5.06414 | CCACCACATGCTCTA CGCTGGTGACGTTCGGG TTTT TCAGCGCGTCATCAACG TTTTTCTTCAGCGGA TERM 6050 4633146 - 4633162 + g 77 -6.5 -4.64676 | opp_overlap 4633146, overlap 4633147 CGCCTTCCCAGATGA TGGCGGT ACG ATCGCCG TTTTCTTGCAGATGG TERM 6051 4633802 - 4633782 - H 100 -9.7 -5.51353 | overlap 4633783 GAAAAACAATAAAAA CCGCCATTG CAA CAATGGCGC AATTCGGATGAAGCC TERM 6052 4633801 - 4633783 - H 100 -13.2 -3.87151 | overlap 4633782 AAAAACAATAAAAAC CGCCATTG CAA CAATGGCG CAATTCGGATGAAGC TERM 6053 4634433 - 4634415 - g 72 -8 -3.8709 | opp_overlap 4634429 AAACCTTTTGAGAAA GCCGGACG TTT CGACCAGC AATCGATGGTTTGCG nrfA 4633821 - 4635257 + | formate-dependent cytochrome c nitrite reductase, c552 subunit nrfB 4635303 - 4635869 + | cytochrome c nitrite reductase, pentaheme subunit TERM 6054 4635969 - 4636018 + G 75 -11.5 -2.93703 | gap 1, overlap 4635971 TGAATATCAATGGTG TGCGTTACGGCATGGTGCATGACG AGT CGTTATGCATCG-GCTGTACCGCC TGTATGGATGCTTGT nrfC 4635866 - 4636537 + | cytochrome c nitrite reductase, Fe-S protein nrfD 4636534 - 4637490 + | nrfD protein TERM 6055 4638999 - 4639011 + G 100 -10.5 -4.82901 | opp_overlap 4638999 GTATTGGTGAACTGA CGCCG GAG CGGCG TTTTTATGAAGCACG nrfE 4637546 - 4639228 + | cytochrome c-type biogenesis protein NrfE nrfF 4639221 - 4639604 + | formate-dependent nitrite reductase complex, nrfF subunit nrfG 4639601 - 4640197 + | formate-dependent nitrite reductase complex, subunit NrfG EcSMS35_4539 4640462 - 4640331 - | hypothetical protein gltP 4640539 - 4641852 + | proton glutamate symport protein TERM 6056 4641860 - 4641883 + T 70 -9.6 -2.91912 | opp_overlap 4641858 4641860 ATCAATAATTGAAGA TTGCCGGG GATATCCA CCCGGCAA TGTGTGGATGCCTGA TERM 6057 4641883 - 4641860 - T 72 -9.6 -3.21153 | gap 1, opp_overlap 4641860, overlap 4641858 ATCAATAATTGAAGA TTGCCGGG-GA TAT CCACCCGGCAA TGTGTGGATGCCTGA TERM 6058 4642008 - 4641979 - T 80 -10.7 -3.30124 | opp_overlap 4641979 4641980 4642005, overlap 4641980 4642005 4642006 TTGTAGGTCGGATAA GGCGTTTACGCCG CATC CGACATCAACGCC TGATGCGACGATTAA TERM 6059 4642026 - 4641980 - T 74 -10.9 -2.57931 | gap 1, opp_overlap 4641980 4641979 4642005 4642010, overlap 4641979 4642005 4642006 TGTAGGTCGGATAAG GCGTTTA-CGCCGCATCCGACA TCAA CGCCTGATGCGACGATTAACGC GTCTTATCAGGCCTA EcSMS35_4541 4642733 - 4642044 - | Sel1 repeat-containing protein TERM 6060 4642812 - 4642793 - R 100 -13.6 -5.66684 | GAATGGATAAAAAAA CAGCCTCC GAAA GGAGGCTG TAGAAAGGACTGTAT fdhF 4644974 - 4642827 - | formate dehydrogenase H, alpha subunit, selenocysteine-containing TERM 6061 4642885 - 4642937 + g 76 -7.9 -4.19177 | gap 4, opp_overlap 4642885 4642887 TACTCGTCAATCACA TACTGC-TCG-GCG-G-CGCGCTGATC GGC GATCGGCTCGACGCGCACGGCGCAGTA TTTGTATTCCGGCGT TERM 6062 4643660 - 4643671 + g 75 -7.2 -4.30576 | GTAAAATGACATCCG CCGC CGAC GCGG TTTTGGTCATAAAGA TERM 6063 4644145 - 4644166 + g 79 -12.3 -3.06815 | opp_overlap 4644143 GCCGCCTGACGAATC TCACTGGCG CTGA CGCCGGTGA TATCTTCAACCGACT TERM 6064 4644226 - 4644261 + g 95 -9.9 -4.69053 | gap 1 TACTCTTCAAAGCCT TCTGTACGG-GAAGCG ACGAA CGCTTTGTCGTACAGA TTTTCTTCAATAATG TERM 6065 4644297 - 4644315 + g 72 -4.4 -4.66609 | opp_overlap 4644297 4644299, overlap 4644299 GCCCATCGCATTCAA CAGCGCGA TGT TCGAGCCG TTTTTCAATGCAATG EcSMS35_4543 4645036 - 4645149 + | hypothetical protein TERM 6066 4645165 - 4645140 - T 100 -14.1 -4.10552 | opp_overlap 4645138 4645137 CGTGACGAAACGAAA TACCGCGTGAC AGCC ATCACGCGGTA GACATTTTATTTTTT EcSMS35_4544 4646638 - 4645172 - | RND efflux system outer membrane lipoprotein TERM 6067 4645657 - 4645640 - G 70 -4.1 -4.60041 | overlap 4645641 ATCCAGGCCGAAAAA CGCTTTG ATAT CAAAGCT CGGATAGAACAGCGC TERM 6068 4646484 - 4646509 + g 72 -6.9 -4.21141 | gap 1 TGCGGCCAGCCGGAG CTGGCAAGATGA ATA TCATCG-GCCAG TTTGATTTGTTCCGG mdtO 4648686 - 4646635 - | multidrug resistance protein MdtO TERM 6069 4648438 - 4648414 - G 71 -2.7 -4.8048 | overlap 4648416 4648417 TTTGTAGATCAAAAA CAGGCTGCCGA TCT CCAGCACCGTG GCAACCACAAACAAG mdtN 4649717 - 4648686 - | multidrug resistance protein MdtN TERM 6070 4648720 - 4648745 + g 70 -4.7 -4.58663 | gap 1, overlap 4648720 4648741 GCGACTGCCGAAGCG CC-GATGCGGAA CAT TTCCGGGTCAGG TTTTTCAACCATGAT TERM 6071 4649320 - 4649342 + g 90 -7.6 -4.85599 | CGTAATGTATCTGTG GCCTGTTTCG CGG CGGCACGGGC TTTTTCTACCGTGGC EcSMS35_4547 4650011 - 4649736 - | hypothetical protein EcSMS35_4548 4650247 - 4650128 - | hypothetical protein TERM 6072 4650212 - 4650181 - GR 100 -14.5 -4.65933 | opp_overlap 4650161 4650175 4650171, overlap 4650182 TATTTTTAAAATAAA TGCTTTTGGGGGC TTCAGC GCCCCCAAAAGCG AGTGGCATTAATTTG TERM 6073 4650211 - 4650182 - GR 100 -18 -3.38836 | opp_overlap 4650161 4650175 4650171, overlap 4650181 ATTTTTAAAATAAAT GCTTTTGGGGGC TTCAGC GCCCCCAAAAGC GAGTGGCATTAATTT EcSMS35_4549 4652205 - 4650220 - | metallo-beta-lactamase family protein TERM 6074 4651781 - 4651799 + gr 71 -9.6 -3.05521 | ACGATGATGCCCGTA TCGCCTTC AAT GAAGGTGA TGTTCGAGATATCCT alsK 4653407 - 4652478 - | D-allose kinase (allokinase) TERM 6075 4653377 - 4653351 - G 77 -7.3 -4.52589 | opp_overlap 4653336 TGTCCGCAGACAAAA GCGGATATGCG TTGCC CCCATATCCAC GCCCGCTACGACGTT alsE 4654086 - 4653391 - | D-allulose-6-phosphate 3-epimerase AlsE alsC 4655077 - 4654097 - | D-allose transport system permease protein AlsC alsA 4656588 - 4655056 - | D-allose transport ATP-binding protein AlsA TERM 6076 4655558 - 4655574 + g 71 -2.2 -5.0133 | overlap 4655549 4655547 TCCCGGCGGCTTTCA GTGATG TAAGC CATCCC TTTTTTCACGGCATC alsB 4657657 - 4656716 - | D-allose-binding periplasmic protein AlsB TERM 6077 4657483 - 4657497 + g 86 -7.1 -4.92777 | opp_overlap 4657483 4657479 AGGCAAAAATATCAA CGCTG ACGCC CAGCG TTTTTGCTTCATCTT TERM 6078 4657672 - 4657709 + r 93 -12.1 -3.90744 | opp_overlap 4657683, overlap 4657678 TGTTCTCACGGTAAG GGGAGAGGTAACTCCGC GATG GCGGAATTACCTTTTTC TTATTTCAGCGCGCC TERM 6079 4657678 - 4657703 + r 100 -11.9 -5.38549 | opp_overlap 4657683, overlap 4657672 CACGGTAAGGGGAGA GGTAACTCCGC GATG GCGGAATTACC TTTTTCTTATTTCAG rpiR 4658600 - 4657710 - | HTH-type transcriptional regulator RpiR (Als operon repressor) TERM 6080 4658136 - 4658115 - G 75 -5.2 -4.62471 | gap 1, overlap 4658116 4658117 GCCAATGCGTAAAAA CTTGTGCTG TACAT CAGCAC-AG ATAGCATTTGATCCT rpiB 4658959 - 4659408 + | ribose 5-phosphate isomerase B EcSMS35_4557 4659477 - 4659806 + | hypothetical protein phnP 4660599 - 4659841 - | phosphonate utilization protein EcSMS35_4559 4661035 - 4660601 - | acetyltransferase TERM 6081 4660910 - 4660960 + g 70 -6.1 -4.18197 | opp_overlap 4660864 4660925, overlap 4660914 CATGTTCGGATCGCG CAGATTGGCGTTAAACC-CCACGCG AAA CGCGTGGTGGTCAAACTCCGC-CTG TTTTAGCTCACAAAT TERM 6082 4660945 - 4660925 - G 86 -12.5 -3.54129 | opp_overlap 4660914 4660910 CAGATTGGCGTTAAA CCCCACGCG AAA CGCGTGGTG GTCAAACTCCGCCTG phnN 4661579 - 4661022 - | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN phnM 4662715 - 4661579 - | phosphonate metabolism protein PhnM TERM 6083 4662331 - 4662346 + g 74 -8.2 -3.97602 | overlap 4662295 4662338 4662343 GCAGACGGTGCTCGG CGCGGT TGAC GCCGCG TTTCTGCGTCTCTTC phnL 4663392 - 4662712 - | phosphonate C-P lyase system protein PhnL phnK 4664261 - 4663503 - | phosphonate C-P lyase system protein PhnK phnJ 4665103 - 4664258 - | phosphonate metabolism protein PhnJ TERM 6084 4664890 - 4664852 - G 74 -8.9 -3.9122 | gap 1, opp_overlap 4664866, overlap 4664856 CACGCGCTTAAAGAA GTTACGGATCGACACCGC GTTG GTGGTGTC-ATCCGCACC CTGGTCAATCACCTT TERM 6085 4664886 - 4664856 - G 70 -10.5 -2.71101 | gap 1, opp_overlap 4664866, overlap 4664852 CGCTTAAAGAAGTTA CGGATCGACACCGC GTTG GTGGTGTC-ATCCG CACCCTGGTCAATCA phnI 4666160 - 4665096 - | phosphonate metabolism protein PhnI TERM 6086 4665741 - 4665753 + g 78 -10.5 -3.53224 | GGCTGTGGTCAGCGT CGGCG CTT CGCCG TTTGCCAGCAGGGTG phnH 4666744 - 4666160 - | phosphonate metabolism protein PhnH TERM 6087 4666347 - 4666333 - G 77 -11.4 -3.14344 | overlap 4666320 TACCCGCGCCAGTAA GGCGCA GCA TGCGCC CGCCGCTCAGGCTGA TERM 6088 4666606 - 4666555 - G 72 -7.9 -3.87869 | gap 1, opp_overlap 4666556 4666575, overlap 4666544 TTAATGGCGCAGAAA GCCA-CACCGGCGTGTCGTTATCG GCCAG CGTCAGCAGCACGCTGGTGGTGGC GATATTCAGCGGCTG TERM 6089 4666615 - 4666629 + g 73 -11.4 -2.77043 | overlap 4666614 TGGTGGCGATATTCA GCGGCT GCC AGCCGC GTTTGAGCTGATGCA phnG 4667193 - 4666741 - | phosphonate C-P lyase system protein PhnG TERM 6090 4666903 - 4666926 + g 79 -10.2 -3.85698 | CATCAGCGCGTCGAT CAGCGCGCAG CGTT CGGCGTGCTG TTTGTCGCGCCCCAG phnF 4667919 - 4667194 - | phosphonates metabolism transcriptional regulator PhnF TERM 6091 4667435 - 4667414 - G 70 -5.1 -4.36914 | gap 1 TGCTCGCGCAGAAAA TCGTGCAGCG AGC CGCTGT-CGA AGCGTTGCAGCGTCG phnE 4668719 - 4667940 - | phosphonate ABC transporter, permease protein phnD 4669800 - 4668784 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein phnC 4670613 - 4669825 - | phosphonate ABC transporter, ATP-binding protein TERM 6092 4670203 - 4670223 + g 74 -8.9 -3.96327 | CATGCCAACGCGGGT CAGCGCCTG TAA CGCGCGCTG TTTCTGCTCGCGGGT EcSMS35_4572 4671189 - 4670746 - | putative phnB protein TERM 6093 4671053 - 4671072 + g 72 -7.1 -4.24002 | CCGGAAGGGCAGTTC TCGGCGC TATCCT GCGCTGA TTTTGGCATTTCGCC TERM 6094 4671287 - 4671255 - R 95 -14.2 -3.15708 | opp_overlap 4671266 4671267, overlap 4671264 4671266 4671267 ACAGATGAGAGGGAA GCCTGATAAGACGC GGTCA GCGTCGCATCAGGC AGTCGGCATCGTTGC TERM 6095 4671321 - 4671266 - R 70 -8.9 -3.23447 | gap 2, opp_overlap 4671266 4671267, overlap 4671264 4671255 4671267 GGAAGCCTGATAAGA CGCGGTCAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGC-GAGCGCC TTATCCGGCTTACCG TERM 6096 4671266 - 4671321 + r 95 -13.3 -3.33261 | gap 2, opp_overlap 4671264 4671255 4671266 4671267, overlap 4671267 GGAAGCCTGATAAGA CGCGGTCAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGC-GAGCGCC TTATCCGGCTTACCG TERM 6097 4671267 - 4671320 + r 100 -16.8 -2.59742 | gap 2, opp_overlap 4671264 4671255 4671267 4671266, overlap 4671266 GAAGCCTGATAAGAC GCGGTCAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGC-GAGCGC CTTATCCGGCTTACC TERM 6098 4671320 - 4671267 - R 81 -12.4 -2.53747 | gap 2, opp_overlap 4671266 4671267, overlap 4671264 4671255 4671266 GAAGCCTGATAAGAC GCGGTCAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGC-GAGCGC CTTATCCGGCTTACC phnA 4671762 - 4671349 - | alkylphosphonate utilization operon protein PhnA TERM 6099 4671739 - 4671727 - G 95 -9.1 -5.08011 | AAAAGCGCCAAAAAA CGGCA GAT TGCCG AAAAAGGCCGCAATT TERM 6100 4672850 - 4672838 - g 77 -3.4 -5.03314 | CGCATCTGCAAAAAA TGCT TAACC AGCA GCTGGCACGCGCCTC EcSMS35_4574 4672087 - 4674315 + | hypothetical protein EcSMS35_4575 4674312 - 4675190 + | hypothetical protein proP 4675454 - 4676956 + | proline/betaine transporter TERM 6101 4676998 - 4676968 - T 81 -12.6 -2.66593 | overlap 4676964 ATAAGCTGAAACGGA TGGCCTGATGTGAC GCT GTCTTATCAGGCCA ATTGAACTCTTAAGG TERM 6102 4677108 - 4677127 + T 73 -5 -4.65722 | gap 1, overlap 4677111 TAACTACCGTGTTCA GCGTGCTGG TGG TCAGCA-GC TTTCTTTATATCTGG basS 4678233 - 4677133 - | sensor histidine kinase BasS TERM 6103 4677808 - 4677835 + g 77 -9.8 -3.57144 | CCTTTCGTTATCCAG CGTGCTGGTCAG GCGA CTGACCAGATCG TTTAACGCTGAAACC basR 4678902 - 4678234 - | DNA-binding response regulator BasR EcSMS35_4579 4680542 - 4678899 - | putative sulfatase TERM 6104 4680623 - 4680590 - R 89 -9.7 -4.54727 | opp_overlap 4680594, overlap 4680594 GCTCGCAAAGCAAAA TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT ATGTGTGCTTGATTA TERM 6105 4680594 - 4680619 + r 100 -14.9 -4.64591 | opp_overlap 4680594 4680590 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTGTGCTTG TERM 6106 4680619 - 4680594 - R 100 -14.9 -3.78998 | opp_overlap 4680594, overlap 4680590 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTGTGCTTG adiC 4681983 - 4680646 - | arginine/agmatine antiporter TERM 6107 4681949 - 4681917 - G 80 -12 -3.33162 | overlap 4681920 CACCTGACCCCATAA TATTCCCCGACACC ATCAG GGTGACGGGGATTA AGCCCACTTTGTGAG TERM 6108 4681946 - 4681920 - G 84 -13.7 -2.53822 | overlap 4681917 CTGACCCCATAATAT TCCCCGACACC ATCAG GGTGACGGGGA TTAAGCCCACTTTGT adiY 4682881 - 4682120 - | transcriptional regulator AdiY TERM 6109 4682211 - 4682201 - GR 75 -5.4 -4.69487 | opp_overlap 4682201 4682199 AAAGACAGAAATAAA GTAC GAC GTAC TGTTGTAGCCGCAGG EcSMS35_4582 4682975 - 4682838 - | hypothetical protein TERM 6110 4683099 - 4683081 - R 100 -8.8 -5.85178 | overlap 4683082 AACAGGCAAAAAAAA GCGCGG GGTGGGA CCGCGC AAAAAGTATGACATT TERM 6111 4683100 - 4683082 - R 70 -6.6 -4.08666 | opp_overlap 4683099, overlap 4683081 ACAGGCAAAAAAAAG CGCGGGGT GGG ACCGCGCA AAAAGTATGACATTT adiA 4685487 - 4683217 - | biodegradative arginine decarboxylase TERM 6112 4683532 - 4683550 + g 90 -7.4 -4.86731 | opp_overlap 4683535 GGAATAGGCTTCATT CAACCGTG CGC CAGGGTTG TTTTCTTTCAGCCAG TERM 6113 4683819 - 4683830 + g 72 -7.2 -4.20918 | CTGTGACCAGCGCCG CCGG AACA CCGG TTTCTTCCAGTTCAC TERM 6114 4684027 - 4684038 + g 70 -5.8 -4.20367 | TTTGCCGGTTTGTGG GTCG GTGA CGAC TTCTTTGTTCCACGG TERM 6115 4684363 - 4684353 - G 70 -6.8 -4.07687 | opp_overlap 4684353 AGTGGGTGGCGAAAA CGGT AGG ACCG TTGTGATCGCCAGGT melR 4686591 - 4685683 - | melibiose operon regulatory protein TERM 6116 4686036 - 4686022 - G 72 -5.6 -4.52589 | opp_overlap 4686032, overlap 4686024 CTGGCTGACATAAAA TTGCGC ATG GCGCGA GACGCTGTTTTTGTG TERM 6117 4686032 - 4686043 + g 74 -2.2 -5.03994 | gap 1, opp_overlap 4686024 4686022 TAAAATTGCGCATGG C-GCG AGA CGCTG TTTTTGTGTGTGCGC TERM 6118 4686795 - 4686742 - H 79 -12.2 -2.54896 | gap 2, opp_overlap 4686753 4686773, overlap 4686738 4686753 TTTTTAGCTAATTTA TTCCCATAAACTCAGAT-TTAC-TGA TACT TCACGCAGGATCTGAGTTTATGGGAA TGCTCAACCTGGAAG TERM 6119 4687526 - 4687514 - g 70 -6.9 -4.14511 | opp_overlap 4687514, overlap 4687515 AACTGGAGCGCAAAA CCGCC GAC GGCAG TTACGTGAATCTCTA TERM 6120 4688119 - 4688094 - g 76 -7.6 -4.18494 | gap 1 TATTCTTACGGAAAA TCGCGACCGTG TTTAC CACG-CCGCGA TGATGGACCCGCATA melA 4686874 - 4688229 + | alpha-galactosidase melB 4688308 - 4689753 + | melibiose carrier protein TERM 6121 4689804 - 4689776 - T 76 -6.1 -4.45151 | opp_overlap 4689776 4689775 AATAGCTAACGAAAA TGGCCTGAT GTGTTATGTTT ATCAGGCCA CTTCTTAATACAATG EcSMS35_4587 4690521 - 4689892 - | hypothetical protein fumB 4692290 - 4690644 - | fumarate hydratase class I, anaerobic TERM 6122 4691264 - 4691279 + g 72 -4.7 -4.66163 | CCGGAATGTACTGGC CTGGA TTGTGT TCCAG TTTTTCGATCCAGAT TERM 6123 4691625 - 4691644 + g 75 -7.2 -4.36914 | gap 1 GTACGGCGGGCAGGC TGCAGTACC GAG GGTAC-GCA TTTTCTCGACGAGGA TERM 6124 4691645 - 4691661 + g 73 -3.7 -4.81249 | overlap 4691646 TACCGAGGGTACGCA TTTTCTC GAC GAGGAAG TTTTTCAGTTTGCCG TERM 6125 4692360 - 4692329 - R 78 -8.7 -4.13767 | opp_overlap 4692353 TTTGTTATTCGAAAA TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA AGTGCATTTATAAGA dcuB 4693708 - 4692368 - | anaerobic C4-dicarboxylate transporter DcuB TERM 6126 4692804 - 4692815 + g 74 -2.2 -5.0538 | GCGATCATACCGGAA CGGA AGAC TTCG TTTTTTGAGATAGAC EcSMS35_4590 4693776 - 4693934 + | hypothetical protein dcuR 4694998 - 4694279 - | transcriptional regulatory protein DcuR dcuS 4696626 - 4694995 - | sensory box sensor histidine kinase DcuS TERM 6127 4695444 - 4695431 - GH 74 -2.3 -5.14563 | TTGCTGATTAAAAAA CCAGC GATA ACCGG AGATTTGATCTTACC TERM 6128 4695703 - 4695715 + gH 70 -9.1 -3.19463 | opp_overlap 4695691 AACGCCATTACTGCG CACCG GAA CGGTG TTGATCAGTAATAGC TERM 6129 4696385 - 4696398 + gH 88 -5.2 -5.24129 | overlap 4696361 GCGATGGCCTGGATG CCGC TCTCCT GCGG TTTTTTCTGCAAGCC EcSMS35_4593 4696618 - 4696752 + | hypothetical protein EcSMS35_4594 4696807 - 4697037 + | hypothetical protein EcSMS35_4595 4697049 - 4697321 + | hypothetical protein EcSMS35_4596 4697640 - 4697846 + | hypothetical protein EcSMS35_4597 4697874 - 4698047 + | hypothetical protein TERM 6130 4698122 - 4698153 + T 100 -16 -3.67588 | opp_overlap 4698090 4698089 4698122 4698126 4698130, overlap 4698123 GGATTTGCGGAACGA CGAACGAAGCAGTC GCCT GACTGCTTCGTTCA TTTAAGTGAAATTTA TERM 6131 4698153 - 4698122 - T 100 -18.2 -2.71364 | opp_overlap 4698122 4698123, overlap 4698090 4698089 4698126 4698130 GGATTTGCGGAACGA CGAACGAAGCAGTC GCCT GACTGCTTCGTTCA TTTAAGTGAAATTTA TERM 6132 4698123 - 4698152 + T 100 -19.5 -2.80071 | opp_overlap 4698089 4698122 4698126 4698130, overlap 4698122 GATTTGCGGAACGAC GAACGAAGCAGTC GCCT GACTGCTTCGTTC ATTTAAGTGAAATTT TERM 6133 4698149 - 4698126 - T 100 -15.4 -3.27298 | opp_overlap 4698123 4698122, overlap 4698122 4698130 TTGCGGAACGACGAA CGAAGCAGTC GCCT GACTGCTTCG TTCATTTAAGTGAAA TERM 6134 4698145 - 4698130 - T 73 -9 -3.43151 | opp_overlap 4698123 4698122, overlap 4698126 4698122 GGAACGACGAACGAA GCAGTC GCCT GACTGC TTCGTTCATTTAAGT lysU 4699683 - 4698166 - | lysyl-tRNA synthetase LysU EcSMS35_4599 4701377 - 4699920 - | amino acid/peptide transporter TERM 6135 4700764 - 4700777 + g 79 -2.3 -5.28778 | overlap 4700765 GGTAAGGCAAATTTG ACGCT AGTG AGCGC TTTTTTATCCATACT TERM 6136 4701401 - 4701422 + r 100 -14.5 -3.30619 | opp_overlap 4701401 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT TERM 6137 4701422 - 4701401 - R 100 -14.5 -5.1861 | opp_overlap 4701401 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT ldcC2 4703583 - 4701436 - | lysine decarboxylase, constitutive TERM 6138 4703645 - 4703606 - R 73 -2.7 -5.08824 | TCTCCAGGTAAAAAA GGCCCCTCCCAACACAT GGGACA AAATGAAAGGAGGAGCC TCGGAAAATACTTTT EcSMS35_4601 4704997 - 4703663 - | putative cadaverine:lysine antiporter TERM 6139 4705291 - 4705265 - R 79 -5.1 -5.10461 | opp_overlap 4705263 4705265, overlap 4705266 4705268 TTTATGTAATAAAAA TTATGCGGCAA ATAAA TTGCCGCAACA TATTATACCAACAGG TERM 6140 4705288 - 4705268 - R 83 -11.2 -3.39664 | opp_overlap 4705265 4705263, overlap 4705266 4705265 ATGTAATAAAAATTA TGCGGCAA ATAAA TTGCCGCA ACATATTATACCAAC cadC 4706901 - 4705363 - | transcriptional activator CadC TERM 6141 4706959 - 4706974 + r 72 -5.4 -4.49906 | overlap 4706960 CCATAATCTATTTTT TCCATC TATA GATGGG TTTATTTACATATTA TERM 6142 4707486 - 4707505 + r 100 -13.6 -4.11295 | opp_overlap 4707486 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG TERM 6143 4707505 - 4707486 - R 100 -13.6 -4.98531 | opp_overlap 4707486 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG TERM 6144 4707551 - 4707567 + r 74 -10.9 -2.62616 | opp_overlap 4707550 4707548 4707545 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA EcSMS35_4604 4708275 - 4707700 - | TetR family transcriptional regulator dsbD 4710009 - 4708312 - | thiol:disulfide interchange protein DsbD cutA 4710323 - 4709985 - | divalent-cation tolerance protein CutA TERM 6145 4710408 - 4710431 + r 72 -9.4 -3.27298 | opp_overlap 4710410, overlap 4710409 AGTCGGCGGGAAAGA AAGCGGGGCG TGAA CGCCCCGCGA TTGATCATTACAGCA TERM 6146 4710409 - 4710430 + r 84 -12.9 -2.56164 | opp_overlap 4710410, overlap 4710408 GTCGGCGGGAAAGAA AGCGGGGCG TGAA CGCCCCGCG ATTGATCATTACAGC TERM 6147 4710429 - 4710410 - R 100 -16.4 -4.41348 | opp_overlap 4710409 4710408 TCGGCGGGAAAGAAA GCGGGGCG TGAA CGCCCCGC GATTGATCATTACAG dcuA 4711740 - 4710439 - | anaerobic C4-dicarboxylate transporter DcuA TERM 6148 4711809 - 4711834 + r 100 -11.9 -4.59342 | opp_overlap 4711812, overlap 4711812 ACTGCTCACAAGAAA AAAGGCACGTC ATCT GACGTGCCTTC TTTATTTGTACTACC TERM 6149 4711812 - 4711831 + r 100 -13.6 -4.39652 | opp_overlap 4711812, overlap 4711809 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTCTTTATTTGTACT TERM 6150 4711831 - 4711812 - R 100 -13.6 -5.55769 | opp_overlap 4711812 4711809 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTCTTTATTTGTACT aspA 4713294 - 4711858 - | aspartate ammonia-lyase TERM 6151 4713158 - 4713173 + g 71 -2.6 -4.92757 | gap 1, opp_overlap 4713158, overlap 4713153 ATACCGCGAACAAAT TCAG-GA ATA TCACTGA TTTTGTTGTTGCTGA TERM 6152 4713592 - 4713613 + H 71 -9.4 -3.01712 | TCGCAACCCATTCAG GTAGCCGG GGTTAA CCGGCTGC TATTACAGGAGAAAC fxsA 4713631 - 4714107 + | suppressor of F exclusion of phage T7 TERM 6153 4714116 - 4714148 + T 79 -4.8 -5.0925 | opp_overlap 4714109 4714116 GGATTAATGTCGAAA CGCCGGATTATG TGGTTATGC CATTTTCCGGCG TTTTTCGTTTTGGCA EcSMS35_4610 4715379 - 4714123 - | amino acid-polyamine-organocation (APC) permease family protein TERM 6154 4715253 - 4715241 - G 77 -6.9 -4.56314 | opp_overlap 4715246, overlap 4715242 CTAAGATAATCAAAA CGGGC CAC GCCCA CAGGCTGTTATTGCC TERM 6155 4715344 - 4715358 + g 70 -7.1 -4.10744 | opp_overlap 4715334 TAGCAGGCCAATGCC CTGGG CCAGC CCCAG TTCTTGTTTGAGTCC groS 4715655 - 4715948 + | chaperonin GroS groL 4715992 - 4717638 + | chaperonin GroL TERM 6156 4717691 - 4717668 - f 86 -8 -4.83246 | opp_overlap 4717668 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTAGTCA TERM 6157 4717668 - 4717691 + F 100 -12.4 -5.50723 | opp_overlap 4717668 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTAGTCA EcSMS35_4613 4717773 - 4718126 + | putative lipoprotein TERM 6158 4718185 - 4718195 + T 74 -6.8 -4.31692 | ATGGGATTATTTCGC CTGC GGT GCAG TTTTGCTGGTGGATT EcSMS35_4614 4719045 - 4718176 - | hypothetical protein TERM 6159 4719290 - 4719311 + r 79 -7.9 -4.30978 | ATCAGTTACTGCTGG CGTAGCTGG AGAT CCAGCGGCG TTTTGCTGGGTTCGC EcSMS35_4615 4720308 - 4719280 - | KamA family protein efp 4720350 - 4720916 + | translation elongation factor P TERM 6160 4720921 - 4720952 + F 100 -13 -3.65046 | overlap 4720925 GCGTGAAGTAATGCG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCAGGTCAGAG TERM 6161 4720925 - 4720948 + F 89 -14.6 -2.66106 | overlap 4720921 GAAGTAATGCGGTTG TGGTGCGGCC TGCA GGCTGCACCA TCACTTATTCAGGTC ecnA 4720968 - 4721093 + | entericidin A ecnB 4721204 - 4721350 + | entericidin B TERM 6162 4721354 - 4721385 + F 95 -8 -5.44721 | opp_overlap 4721358, overlap 4721358 GCGCAGCAGTAAGCA ATAACGGTACGACA GTTA TGTCGTGCCGTTTG TTTTTTTGCAATAGT TERM 6163 4721381 - 4721358 - f 85 -11 -3.84246 | opp_overlap 4721354 4721358 AGCAGTAAGCAATAA CGGTACGACA GTTA TGTCGTGCCG TTTGTTTTTTTGCAA TERM 6164 4721358 - 4721381 + F 100 -13.2 -5.20328 | opp_overlap 4721358, overlap 4721354 AGCAGTAAGCAATAA CGGTACGACA GTTA TGTCGTGCCG TTTGTTTTTTTGCAA sugE 4721525 - 4721842 + | quaternary ammonium compound-resistance protein SugE blc 4722372 - 4721839 - | outer membrane lipoprotein Blc TERM 6165 4722449 - 4722432 - R 100 -11.3 -4.46581 | overlap 4722423 GAAAAGCGGAGAAAA GGTCCGA AAAT TCGGACC CGATGAAATTTTACT ampC 4723593 - 4722460 - | beta-lactamase precursor TERM 6166 4723614 - 4723638 + r 100 -12.7 -3.75629 | opp_overlap 4723616, overlap 4723615 CTGGTTTCCATACAA AACGGCCCGCC ATA GGCGGGCCGGA TTTACATTGGCGATG TERM 6167 4723615 - 4723637 + r 100 -16.2 -2.85056 | opp_overlap 4723616, overlap 4723614 TGGTTTCCATACAAA ACGGCCCGCC ATA GGCGGGCCGG ATTTACATTGGCGAT TERM 6168 4723636 - 4723616 - R 100 -19.7 -4.52589 | opp_overlap 4723615 4723614 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCG GATTTACATTGGCGA frdD 4724015 - 4723656 - | fumarate reductase, D subunit frdC 4724421 - 4724026 - | fumarate reductase, cytochrome b subunit frdB 4725166 - 4724432 - | fumarate reductase, iron-sulfur protein frdA 4726967 - 4725159 - | fumarate reductase, flavoprotein subunit TERM 6169 4725970 - 4725995 + g 79 -2.6 -5.24129 | gap 1, overlap 4725972 GCTTTCGCCAGTTCG CAG-ATGAACG GCAGA CGTTCATGCAG TTTTTTCTCGCCGAG TERM 6170 4726059 - 4726031 - G 70 -7.3 -4.04206 | opp_overlap 4726032 4726034 4726044, overlap 4726034 4726036 GCAGGTCGAGATAAA CCACATCGCCACG TGG CGTGGAGATGGTG TTGCCTTTACGCCAT TERM 6171 4726056 - 4726034 - G 75 -12 -3.06418 | opp_overlap 4726032 4726034 4726044, overlap 4726031 4726036 GGTCGAGATAAACCA CATCGCCACG TGG CGTGGAGATG GTGTTGCCTTTACGC TERM 6172 4726034 - 4726056 + g 72 -12 -2.51888 | opp_overlap 4726034 4726031 4726036, overlap 4726032 4726044 GGTCGAGATAAACCA CATCGCCACG TGG CGTGGAGATG GTGTTGCCTTTACGC TERM 6173 4728096 - 4728108 + G 70 -10.5 -2.71712 | overlap 4728095 CAAGATAACCGTAAG CGCGC GGC GCGCG GTTTGCCGCAGCACC genX 4727292 - 4728269 + | lysyl-tRNA synthetase homolog GenX TERM 6174 4728529 - 4728508 - g 85 -3 -5.34555 | opp_overlap 4728508 4728510 4728525, overlap 4728510 TCACACGATAAAAAA GATGAGTC TGATAG GACTCATA TTGATGATCTTTACT TERM 6175 4728527 - 4728510 - g 70 -5.6 -4.30057 | opp_overlap 4728508 4728510 4728525, overlap 4728508 ACACGATAAAAAAGA TGAGTC TGATAG GACTCA TATTGATGATCTTTA TERM 6176 4729014 - 4729028 + G 83 -5.8 -4.91084 | ATTTAGTATTGCTGT TAGTAA GCA TTACTA TTTTGTTATTAAATG EcSMS35_4627 4728446 - 4729990 + | amino acid permease family protein TERM 6177 4730040 - 4730001 - f 82 -10.1 -3.8647 | gap 1, opp_overlap 4730009 ACTGATCATATGAAA TCCTG-CAACTCATCGTC TCTCC GGCGATGAGTTGTCTGGA AAGGAAGACGTTATG TERM 6178 4730009 - 4730031 + F 75 -9.9 -3.48276 | opp_overlap 4730001 TATGAAATCCTGCAA CTCATCGTC TCTCC GGCGATGAG TTGTCTGGAAAGGAA EcSMS35_4628 4730053 - 4730367 + | hypothetical protein TERM 6179 4730618 - 4730592 - g 85 -3 -5.40072 | gap 1, opp_overlap 4730610 TTGTGGCGAAAAAAA CGCGGCTGG TTTATGTACG CCA-CCGCG CTGGCTATTTTCGGC EcSMS35_4629 4730376 - 4730678 + | hypothetical protein TERM 6180 4730698 - 4730679 - T 100 -13.6 -3.28924 | CAGTTTTGCTTATAA GCCGGATG GGTT CATCCGGC CACAAAGACCTTACA EcSMS35_4630 4734032 - 4730709 - | mechanosensitive ion channel family protein TERM 6181 4731215 - 4731236 + g 72 -5.7 -4.56775 | opp_overlap 4731193 GATCGCGGATCGTTA CCGTATCGC CAAT GCGAATCGG TTTTTCGAACAGGAT TERM 6182 4732002 - 4731967 - G 74 -10.4 -3.48276 | gap 1, opp_overlap 4731982, overlap 4731986 4731989 GCCGTTGCCAGATAA CCCACCGCCGA-CGCCA GAA TAGCGACCAGCGGTGCG CTAATCATCATGTTC psd 4735022 - 4734054 - | phosphatidylserine decarboxylase rsgA 4736170 - 4735118 - | ribosome small subunit-dependent GTPase A orn 4736265 - 4736810 + | oligoribonuclease TERM 6183 4736930 - 4736912 - T 72 -3.2 -4.9792 | CACTTGAGATAAAAA CTCAAAAA AAA TTTTTTAG GGGGGTTGCAGAGGG TERM 6184 4737063 - 4737047 - T 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6185 4737121 - 4737108 - T 72 -6.7 -4.28049 | TCCAAAATTTGAAAA GTGCT GCAA AGCAC AGACCACCCAATCGC TERM 6186 4737296 - 4737280 - T 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6187 4737407 - 4737391 - T 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6188 4737463 - 4737490 + T 77 -3.4 -5.27206 | gap 1, overlap 4737466 CTCTCAATAAAATAT CCA-CAGCGACGC GAT GCGTTATTGCTGG TTTTTGTTGTCTCTG EcSMS35_4637 4738849 - 4737710 - | iron-sulfur cluster binding protein TERM 6189 4738556 - 4738542 - G 72 -10 -3.32844 | opp_overlap 4738541 4738540 CGGCCCAGCGCATAA CGGCTA ACA TAGCCG AGTTTGGGGTTTTTC TERM 6190 4739391 - 4739377 - gH 85 -11.4 -3.53012 | GCCTGCTGGCTGAAA CTGGCG CTA CGCCAG GCGCGGTGATCAACG EcSMS35_4638 4738863 - 4740395 + | YjeF family protein EcSMS35_4639 4740370 - 4740828 + | putative P-loop hydrolase amiB 4740847 - 4742184 + | N-acetylmuramoyl-L-alanine amidase AmiB TERM 6191 4742416 - 4742389 - g 83 -5.4 -5.14563 | overlap 4742392 TGCGGTATCAAAAAA GATGAGCTGGCG CTGG CGCTGGCTCGTC ATGCCACCAGTAAAA TERM 6192 4743265 - 4743255 - g 77 -8.2 -4.09685 | TGCTATTCCGGAAAA CCGC GTG GCGG CGGGGCGCAATCATT TERM 6193 4743484 - 4743451 - g 73 -3.7 -4.78661 | overlap 4743452 ATGCAAAAACCAAAA GCGCCAGAACCGCAG GAAC CTGCACTTGCGGCGA ACAGTCAGAGTTTTG TERM 6194 4743712 - 4743700 - g 74 -3.3 -4.91109 | TCGGCATTAGAAAAA GCGCA GTC TGCCC TGGCGGAATTGGGTA mutL 4742194 - 4744041 + | DNA mismatch repair protein MutL miaA 4744034 - 4744984 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 6195 4745098 - 4745125 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4745097 4745094, overlap 4745091 AATCTTTACAAGATC CGTTCCTGAACGC ACT GCGT-CGGGAACG TGTTCCAGTTTCTAT TERM 6196 4745301 - 4745291 - g 72 -8.2 -3.78778 | overlap 4745292 TCATCACAGTAACAA CGCC GGT GGCG GTACCAGCAGTAACT hfq 4745070 - 4745378 + | RNA chaperone Hfq TERM 6197 4746347 - 4746335 - g 71 -3.3 -4.77567 | ACGTGTACAAGAAAA CATCG AAG CGGTG AATACGGTTCTTGAA TERM 6198 4746498 - 4746462 - g 90 -9.5 -4.4768 | overlap 4746458 GACGAAGAGAACAAA CCGATCCGTGTCTG-GC TTTCC GCACAGAC-CGGAGCGG GGATACCACAGCTTT hflX 4745454 - 4746734 + | GTP-binding protein HflX TERM 6199 4747034 - 4747057 + G 70 -10.9 -2.73364 | opp_overlap 4746997 GTTCATCGCAAGGCC CGCGCCCGC AGCTTG GCGGTCGCG TCGTTACCATCGCAG TERM 6200 4747137 - 4747126 - g 70 -7.2 -4.03811 | opp_overlap 4747136 TATACCATTAAAGAA GCCG AACG CGGC GTGGTAACACGCTTT TERM 6201 4747832 - 4747819 - g 75 -5.3 -4.69664 | GAGACGATGGAAAAA GTGTT GGGC AACAC CCGCAAAGTGCTGGT TERM 6202 4748051 - 4748032 - g 81 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC CAAC GCGCAGCG TAACGACTACCAGCG hflK 4746820 - 4748079 + | HflK protein hflC 4748082 - 4749086 + | HflC protein TERM 6203 4749143 - 4749115 - f 84 -9.6 -4.19678 | gap 1, opp_overlap 4749116, overlap 4749116 GTACAGGTCAATAAA GCCACCG-CATCC TCAG GGATGTCGGTGGT TTTCTTTTTCTATAA TERM 6204 4749116 - 4749142 + F 100 -13.1 -5.38839 | gap 1, opp_overlap 4749115 4749116 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA TERM 6205 4749142 - 4749116 - f 86 -13.1 -3.11325 | gap 1, opp_overlap 4749116, overlap 4749115 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA EcSMS35_4647 4749168 - 4749365 + | hypothetical protein TERM 6206 4749839 - 4749829 - g 74 -8.2 -3.86194 | overlap 4749816 4749830 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 6207 4749984 - 4749952 - g 72 -5.6 -4.56775 | opp_overlap 4749952 4749974, overlap 4749975 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4749469 - 4750767 + | adenylosuccinate synthetase TERM 6208 4750822 - 4750856 + F 79 -11.6 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT nsrR 4750972 - 4751397 + | transcriptional repressor NsrR TERM 6209 4751559 - 4751535 - g 75 -5.7 -4.71482 | gap 1, overlap 4751536 ACCAAACGTGAAAAA CCGGCCAGCC GTGATG AGCTGGC-GG TAGAACTGCACATTG TERM 6210 4753774 - 4753763 - g 70 -7.2 -4.08806 | CGAGAAAAAAACGAA GCCG AAAG CGGC GAAGAAAGACGCGAG rnr 4751436 - 4753877 + | ribonuclease R TERM 6211 4753884 - 4753904 + F 81 -11.2 -3.20723 | GCAGAGTGATCATTA CCCTCTTC AAACA GAAGAGGG TTAGATTGCTGACAA TERM 6212 4754177 - 4754202 + G 76 -11.1 -3.31144 | overlap 4754178 TCTGTTGCCGCTGAT TCACGCCCTTG AGTC CCAGGGCGTGG TTATCCAGCTGGCAA TERM 6213 4754178 - 4754201 + G 76 -12.4 -2.58544 | overlap 4754177 CTGTTGCCGCTGATT CACGCCCTTG AGTC CCAGGGCGTG GTTATCCAGCTGGCA TERM 6214 4754272 - 4754242 - g 74 -6 -4.4648 | opp_overlap 4754242 4754249 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC TCGTGTGAAGCCAGG EcSMS35_4651 4754058 - 4754789 + | RNA methyltransferase TERM 6215 4754828 - 4754809 - f 73 -6.4 -4.3534 | opp_overlap 4754810, overlap 4754810 TCTGAATTATGAAAA GCCATCCA GATT TGGATGGT TTTTTTTTGTCTATA TERM 6216 4754810 - 4754827 + F 100 -9.9 -6.32216 | opp_overlap 4754809 4754810 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTTGTCTAT TERM 6217 4754827 - 4754810 - f 72 -9.9 -3.20722 | opp_overlap 4754810, overlap 4754809 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTTGTCTAT EcSMS35_4652 4754916 - 4755317 + | hypothetical protein EcSMS35_4653 4755336 - 4756034 + | PspA/IM30 family protein TERM 6218 4756038 - 4756066 + F 70 -8.9 -3.22475 | opp_overlap 4756035, overlap 4756036 4756039 CAGGGCGAGTAATTT TTTGCCAGCCT CACTGCA AGGCTGGCAAC TATTATAAGGATAAA TERM 6219 4756039 - 4756065 + F 81 -12.4 -2.53271 | opp_overlap 4756035, overlap 4756038 4756036 AGGGCGAGTAATTTT TTGCCAGCCT CACTGCA AGGCTGGCAA CTATTATAAGGATAA TERM 6220 4756479 - 4756491 + G 74 -3.3 -5.00616 | opp_overlap 4756480, overlap 4756480 AAACTGGCAGGAAAA ACGCT GGC AGCGA TTTTTTAACAGCGAA TERM 6221 4756490 - 4756480 - g 85 -6.8 -4.73388 | opp_overlap 4756480 4756479 AACTGGCAGGAAAAA CGCT GGC AGCG ATTTTTTAACAGCGA EcSMS35_4654 4756084 - 4756743 + | hypothetical protein EcSMS35_4655 4756761 - 4757159 + | putative inner membrane protein TERM 6222 4757303 - 4757314 + G 79 -2.2 -5.27779 | gap 1, overlap 4757303 AACGTTGGCGCTAAT G-GGC GGT GCCGC TTTTTTCGTATTGAA TERM 6223 4757447 - 4757459 + G 72 -6.2 -4.39828 | opp_overlap 4757447 4757454 4757455, overlap 4757454 TCATGGCTGGAACAA CGCC AAAGC GGCG TTTTATGCCGATGTT TERM 6224 4757716 - 4757706 - g 80 -5.4 -5.00616 | GGTTCTGGCAAAAAA GAGT CTT ACTC TTCGGGCGGCTTTAC EcSMS35_4656 4757169 - 4757807 + | hypothetical protein EcSMS35_4657 4757810 - 4758973 + | glutathionylspermidine synthase domain-containing protein TERM 6225 4759042 - 4759005 - f 95 -14.3 -3.14132 | opp_overlap 4759009 TCTTTCTGTCATGAA TCCATGGCAGTGACCAT ACTA ATGGTGACTGCCATTGA TGGAGGGAGACACAG TERM 6226 4759009 - 4759038 + F 93 -13.7 -3.14132 | opp_overlap 4759005 TCTGTCATGAATCCA TGGCAGTGACCAT ACTA ATGGTGACTGCCA TTGATGGAGGGAGAC TERM 6227 4759403 - 4759415 + G 100 -10.5 -4.68724 | overlap 4759384 CCGGCGCATTTGTGG CGCGC GCG GCGCG TTTTATGTTACATGC EcSMS35_4658 4759057 - 4760682 + | acyl-CoA dehydrogenase family protein TERM 6228 4760829 - 4760798 - T 78 -11.6 -2.85351 | opp_overlap 4760798 4760823 TTGCTGTAGATGATA CTCACGCATACAGG ATCG CCTGTACGCGCCAG TTATCAGGCTGCTGG EcSMS35_4659 4761086 - 4760799 - | hypothetical protein TERM 6229 4761043 - 4761085 + g 76 -3.5 -4.98531 | gap 1 GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA EcSMS35_4660 4761552 - 4761223 - | hypothetical protein EcSMS35_4662 4761734 - 4762483 + | phospholipase/carboxylesterase ulaR 4763235 - 4762480 - | transcriptional regulator UlaR TERM 6230 4763067 - 4763082 + g 87 -4.6 -5.22039 | overlap 4763068 GCTGGGTAATAGCTT CTGCGC CATT GCGCAC TTTTTTCAGTTTGCC TERM 6231 4763335 - 4763291 - R 71 -8 -3.80551 | gap 1, overlap 4763293 4763294 GAAATAGCCAGGAAA TACTACGCCGGATAGCGCGAA CTAC TCCACGCTATCCGGTATAA-A CGACAGATTACAGGA TERM 6232 4763334 - 4763293 - R 100 -13.1 -3.47762 | overlap 4763291 4763294 AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTAC TCCACGCTATCCGGTATAA ACGACAGATTACAGG TERM 6233 4763333 - 4763294 - R 87 -14.4 -2.67934 | overlap 4763293 4763291 ATAGCCAGGAAATAC TACGCCGGATAGCGCGAA CTAC TCCACGCTATCCGGTATA AACGACAGATTACAG EcSMS35_4663 4764407 - 4763343 - | putative L-ascorbate-6-phosphate lactonase ulaG TERM 6234 4764717 - 4764737 + H 70 -9 -3.24423 | opp_overlap 4764716 TGAATGCACAACATT CCGGGTGT GTGGA ATACCCGG TTACCTCTTCTTCAG ulaA 4764762 - 4766159 + | ascorbate-specific permease IIC component ulaB 4766175 - 4766480 + | ascorbate-specific phosphotransferase enzyme IIB component ulaC 4766490 - 4766954 + | ascorbate-specific phosphotransferase enzyme IIA component EcSMS35_4667 4766968 - 4767618 + | orotidine 5'-phosphate decarboxylase / HUMPS family protein TERM 6235 4767687 - 4767667 - g 100 -12.5 -4.7497 | GGCATCTATGAAAAA GCGCTCCCC GCC GGGGAGTGC TGGCTGGAACGGCTG ulaE 4767628 - 4768482 + | L-ribulose-5-phosphate 3-epimerase ulaF 4768482 - 4769168 + | L-ribulose-5-phosphate 4-epimerase TERM 6236 4769256 - 4769239 - T 100 -12.7 -5.40072 | CGTTTTTCAAAAAAA GCCCCCT GCGA AGGGGGC AAAGCAAACTATGGC EcSMS35_4670 4769572 - 4769297 - | hypothetical protein rpsF 4769900 - 4770295 + | ribosomal protein S6 TERM 6237 4770434 - 4770419 - f 74 -10.4 -3.21099 | TCTGTGCAGGAGGAA GCCGGT TTTC ACCGGC AGGCGTGGTGCCAAA rpsR 4770621 - 4770848 + | ribosomal protein S18 rplI 4770890 - 4771339 + | ribosomal protein L9 TERM 6238 4771360 - 4771388 + T 100 -16.1 -3.21934 | opp_overlap 4771365, overlap 4771365 TATTCAACGAGACGT AAAAACGCCGACC ATT GGTCGGCGTTTTG CTTTTGTAGCGAGCA TERM 6239 4771383 - 4771365 - T 100 -16 -4.72333 | opp_overlap 4771365 4771360 AACGAGACGTAAAAA CGCCGACC ATT GGTCGGCG TTTTGCTTTTGTAGC TERM 6240 4771365 - 4771383 + T 100 -16 -4.73108 | opp_overlap 4771365, overlap 4771360 AACGAGACGTAAAAA CGCCGACC ATT GGTCGGCG TTTTGCTTTTGTAGC EcSMS35_4674 4772422 - 4771451 - | TRAP transporter solute receptor DctP family protein TERM 6241 4771790 - 4771805 + g 72 -6.1 -4.41548 | overlap 4771780 GTGACGCATGGTGGT CAGCG CCATCA CGCTG TTTTCTGCCATATCG TERM 6242 4772463 - 4772446 - R 95 -12.7 -3.6761 | overlap 4772444 CTTTTCTAATAAATA TGGCGGC AGGT GCCGCCA GTGAATGCGCATCAG EcSMS35_4675 4773776 - 4772475 - | TRAP transporter, DctM subunit EcSMS35_4676 4774295 - 4773819 - | TRAP transporter, DctQ-like membrane protein EcSMS35_4677 4776397 - 4774316 - | pyridine nucleotide-disulphide oxidoreductase TERM 6243 4774986 - 4774960 - G 76 -4.2 -4.89233 | opp_overlap 4774978, overlap 4774953 4774961 4774976 GACGAACAGCAAAAA CCTGCCCGGCAT TCA ACGCCGCGCCGC CAGGTCGGGTGACGC TERM 6244 4775743 - 4775789 + g 82 -9.4 -4.26076 | gap 2, overlap 4775743 CCCATGGGTTATGGG C-GCGATGACCG-GTCGCGAGG ATTGC CCCCGCCACGCGGTCTTCGCCG TTTTCGTCACGCTGA EcSMS35_4678 4777935 - 4776394 - | CoA-transferase TERM 6245 4777583 - 4777566 - G 70 -4.7 -4.58283 | CAACGTGGGTAAAAA GCCCCGG ACGT CCGGCAC CGATCTCCCGTAGCA TERM 6246 4777902 - 4777919 + g 72 -7.7 -3.9644 | gap 1 CGTCCTGAATTTGCG CCGCC-AG TGC CTCGGCGG TTGTTATCTTACGCA EcSMS35_4679 4778721 - 4777945 - | enoyl-CoA hydratase/isomerase family protein TERM 6247 4778609 - 4778627 + g 72 -6 -4.34737 | opp_overlap 4778609 ATTTCATTTAAATAA TGGTCGAG AGA TTCGATCA TTTCTTCATTAATAG EcSMS35_4680 4779573 - 4778731 - | AP endonuclease EcSMS35_4681 4780374 - 4779583 - | oxidoreductase, short chain dehydrogenase/reductase family protein TERM 6248 4780463 - 4780440 - H 71 -3.9 -4.74504 | opp_overlap 4780443, overlap 4780442 ACTGGAAGGTAAAAA GATCAACCA TCTAGT TGGTTGATA TGCGAGAGTGATCAC TERM 6249 4781112 - 4781099 - g 72 -6.7 -4.22375 | ATATTATTTAATAAA CCAGT ACAC ACTGG GGATGGTTTATCACA TERM 6250 4781157 - 4781196 + G 82 -9.3 -4.2558 | gap 1, opp_overlap 4781182 CCTGAGGCTTTGGAA GCCAGACGCAGGGTGATC AAAGA GACCATCCTGAG-CTGGC TTTTGGTGAACCCTG EcSMS35_4682 4780584 - 4781222 + | TetR family transcriptional regulator EcSMS35_4683 4781852 - 4781223 - | opacity-associated family protein TERM 6251 4781439 - 4781459 + g 72 -9.7 -3.3095 | overlap 4781442 ATGGTCGCGGAACAG CTGGGCAAG GGT CTTGCCTGG TTCTACGCGATATGT fklB 4782070 - 4782690 + | FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase FklB cycA 4782999 - 4784402 + | D-serine/D-alanine/glycine transporter TERM 6252 4784425 - 4784440 + F 87 -10.4 -4.44187 | opp_overlap 4784425 TTTATAACTCTGAAA GGCACC TGCG GGTGCC TTTGTCTTTATATAT TERM 6253 4784440 - 4784425 - f 78 -10.4 -3.62591 | opp_overlap 4784425 TTTATAACTCTGAAA GGCACC TGCG GGTGCC TTTGTCTTTATATAT EcSMS35_4686 4784536 - 4785693 + | hypothetical protein EcSMS35_4687 4785726 - 4787219 + | hypothetical protein TERM 6254 4787254 - 4787224 - T 100 -17 -3.70853 | opp_overlap 4787228 TGAATGACTGAATAA TCAACGATCCTGCC CAT GTCAGGATCGTTGA TCGAACAAATCACTC TERM 6255 4787228 - 4787250 + T 83 -12 -3.14344 | opp_overlap 4787224 TGACTGAATAATCAA CGATCCTGCC CAT GTCAGGATCG TTGATCGAACAAATC EcSMS35_4688 4787926 - 4787264 - | regulator of cell morphogenesis and NO signaling TERM 6256 4787955 - 4787973 + r 77 -10.4 -3.53091 | opp_overlap 4787955 TTCTTAATAAGATAA GATGCATT TTA AATGCATC TTTAAGGCAAAAGCT TERM 6257 4787973 - 4787955 - R 80 -10.4 -3.83318 | opp_overlap 4787955 TTCTTAATAAGATAA GATGCATT TTA AATGCATC TTTAAGGCAAAAGCT EcSMS35_4689 4788999 - 4788034 - | hypothetical protein EcSMS35_4690 4789967 - 4789107 - | NmrA family protein EcSMS35_4691 4790056 - 4790436 + | putative transcriptional regulator TERM 6258 4790499 - 4790540 + T 71 -8.8 -3.53012 | gap 1, opp_overlap 4790493 4790495, overlap 4790505 4790506 GGCGGATAAGATGCG TCAGCA-TCGCATCCGCCA ATAAA TGCCGGATGCGGTTGATGA TTTGCAGGCCGAAAA TERM 6259 4790505 - 4790533 + T 80 -11 -3.32769 | opp_overlap 4790493 4790495, overlap 4790499 4790506 TAAGATGCGTCAGCA TCGCATCCGCCA ATAAA TGCCGGATGCGG TTGATGATTTGCAGG TERM 6260 4790506 - 4790532 + T 81 -12.3 -2.5934 | opp_overlap 4790495, overlap 4790505 4790499 AAGATGCGTCAGCAT CGCATCCGCCA ATAAA TGCCGGATGCG GTTGATGATTTGCAG cpdB 4792508 - 4790565 - | 2',3'-cyclic-nucleotide 2'-phosphodiesterase TERM 6261 4791882 - 4791827 - G 75 -11.8 -2.88663 | opp_overlap 4791869 ACGGATCGGCAGACA GCCCGGAATGCGCCAGAACGACAACG ACAT CGGCACCTTTCTCGCGCATTTCAGGC ACGTATTTGCGCACG TERM 6262 4792211 - 4792229 + g 70 -5.2 -4.39386 | opp_overlap 4792211, overlap 4792212 TTAATGCCTTATAGA CCGGGTGA ATA TCACCTGC TTTTAATCCTTTCGC cysQ 4792698 - 4793438 + | 3'(2'),5'-bisphosphate nucleotidase EcSMS35_4693 4793985 - 4793428 - | hypothetical protein EcSMS35_4695 4794310 - 4794516 + | hypothetical protein TERM 6263 4794534 - 4794567 + T 70 -7.5 -3.89614 | gap 1, opp_overlap 4794539 4794541, overlap 4794536 4794541 AAAGTGCTATGCAGT AATAAGACGGCTCCTG ATT CAGGAGCCGT-TGATG TTTCTGGGGGTTACG TERM 6264 4794536 - 4794565 + T 77 -10.1 -3.5362 | gap 1, opp_overlap 4794539 4794541, overlap 4794534 4794541 AGTGCTATGCAGTAA TAAGACGGCTCCTG ATT CAGGAGCCGT-TGA TGTTTCTGGGGGTTA TERM 6265 4794563 - 4794539 - T 100 -14.3 -3.73647 | opp_overlap 4794536 4794534 4794541, overlap 4794541 GCTATGCAGTAATAA GACGGCTCCTG ATT CAGGAGCCGTT GATGTTTCTGGGGGT TERM 6266 4794541 - 4794561 + T 100 -16.9 -3.50335 | opp_overlap 4794541 4794539, overlap 4794536 4794534 TATGCAGTAATAAGA CGGCTCCTG ATT CAGGAGCCG TTGATGTTTCTGGGG TERM 6267 4794561 - 4794541 - T 100 -16.9 -3.44998 | opp_overlap 4794536 4794534 4794541, overlap 4794539 TATGCAGTAATAAGA CGGCTCCTG ATT CAGGAGCCG TTGATGTTTCTGGGG EcSMS35_4696 4795921 - 4794578 - | putative transporter msrA 4796882 - 4796244 - | methionine-S-sulfoxide reductase TERM 6268 4797013 - 4797026 + GH 74 -2.4 -5.06816 | TAGTCTGCTTTTTAA TCCA TATTAC TGGA TTTTTGTTAAGCCGT EcSMS35_4698 4796990 - 4797118 + | hypothetical protein EcSMS35_4699 4797088 - 4798821 + | OMP85 family outer membrane protein TERM 6269 4799446 - 4799436 - g 72 -4.6 -4.72986 | opp_overlap 4799437, overlap 4799437 CAGCCTGATGAAAAA CCGC TCG GCGA AACGCTGAAAGATCT TERM 6270 4800952 - 4800913 - g 79 -2.1 -5.22794 | gap 1, overlap 4800916 ATAAGGAGCAAAAAA TCAGCAT-CGGGCCACAC TGTTG GCTTAACCCGAATGCGGA ATTGTGCGTGCCGCA TERM 6271 4802547 - 4802568 + G 70 -10.9 -2.70315 | overlap 4802545 4802544 CTATATCTGGAAGCC GTGTCTGGT GTAG ACCAGGCAC TGGATTTGCTCTATC EcSMS35_4700 4798818 - 4802597 + | hypothetical protein TERM 6272 4802677 - 4802663 - g 72 -11.4 -2.52834 | opp_overlap 4802662 4802661, overlap 4802639 4802644 4802662 CACTGGATGACCAAT GCCCAG TTA CTGGGC GATTTCAGTATCGAT EcSMS35_4701 4802600 - 4802941 + | hypothetical protein TERM 6273 4802949 - 4802973 + F 100 -10.8 -5.00616 | gap 1, opp_overlap 4802947, overlap 4802953 ATAAGTAACCATACG CATACGCCACC TTCG GGTGGCGT-TG TTTTTTGCGAGACGA TERM 6274 4802953 - 4802970 + F 100 -12.7 -4.61482 | opp_overlap 4802947, overlap 4802949 GTAACCATACGCATA CGCCACC TTCG GGTGGCG TTGTTTTTTGCGAGA TERM 6275 4802979 - 4802994 + F 80 -9 -4.05091 | GGTGGCGTTGTTTTT TGCGAG ACGA CTCGCA TTCTGTTTTGTAATT chpS 4803153 - 4803404 + | pemI protein 2 chpB 4803398 - 4803748 + | pemK protein 2 ppa 4804357 - 4803827 - | inorganic diphosphatase TERM 6276 4804855 - 4804839 - g 70 -7.3 -4.12902 | GAATTACGTTGAAAA TTGCCGA TGG TCAGCAA AAGCAGGAAAACCAG TERM 6277 4805483 - 4805493 + G 70 -6.8 -4.08767 | CTAACGCCGAATATG GCAG GCC CTGC TTTTGACGCGCTGGA EcSMS35_4705 4804667 - 4805623 + | putative sugar ABC transporter, periplasmic sugar-binding protein TERM 6278 4805655 - 4805688 + F 100 -13.8 -3.30243 | opp_overlap 4805666, overlap 4805672 4805674 ATGCCGATTTGTGGG CCGCCGGATAAGGC ATTCAC GCCGCATCCGGCGG TTGTGCGAGATGCCT TERM 6279 4805797 - 4805781 - g 72 -8.7 -3.8505 | opp_overlap 4805781, overlap 4805776 ACCAACACCAGGAAA TCCTCCG CAC CGAAGGA TTAAGTAAATTTTTC EcSMS35_4706 4805756 - 4807258 + | putative sugar ABC transporter, ATP-binding protein TERM 6280 4807781 - 4807793 + G 76 -9.1 -3.71848 | TCTCTCATGGTTCGG CAGCG GAT CGCTG TTGTTCCTGCCAACG EcSMS35_4707 4807272 - 4808294 + | putative sugar ABC transporter, permease protein TERM 6281 4808610 - 4808628 + G 70 -4.4 -4.5032 | GGGGCTTTTGATCGA CGCCCTGA AGA TCCCGGCG TTTATTATTACTCTG TERM 6282 4809148 - 4809175 + G 77 -3.4 -5.10765 | gap 1, overlap 4809150 GATGGCACGCTGAGT TCCTGGTGGACGA AAA TCG-CCATCGGTA TTTTGTTGTTTATTT EcSMS35_4708 4808281 - 4809276 + | putative sugar ABC transporter, permease protein TERM 6283 4809301 - 4809280 - T 100 -15.9 -4.87665 | GCGCAGCGATAAAAA CGCCTCTCC GTGT GGAGAGGCG CAGGAGATTACGCGT fbp 4810307 - 4809309 - | fructose-1,6-bisphosphatase TERM 6284 4810252 - 4810275 + g 81 -9.6 -4.09864 | GCAGTGAGCTCACCG GTAGCATGAG AAAA CTCGTGCTGC TTTTCGACAATAAAT EcSMS35_4710 4810370 - 4810501 + | hypothetical protein mpl 4810483 - 4811856 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 6285 4811849 - 4811839 - T 74 -8.2 -4.15044 | GGGCTGGCGAAGAAA GCGG AAG CCGC GCAGTAATTCGGCCT TERM 6286 4811915 - 4811877 - T 89 -14.7 -2.88544 | gap 1, overlap 4811880 4811891 CCTCAGCCTGATATA GTATTGCCGGATAAGGCG TTCA CGCCGCATCCGGCAA-AC CATACTCACATCAAC TERM 6287 4811913 - 4811880 - T 100 -17.5 -2.69468 | overlap 4811877 4811891 CAGCCTGATATAGTA TTGCCGGATAAGGCG TTCA CGCCGCATCCGGCAA ACCATACTCACATCA yjgA 4812490 - 4811939 - | YjgA protein TERM 6288 4812106 - 4812131 + g 76 -7.5 -4.26189 | CGATGGCATCATCAC CCTGGTCGATC AGAC GATCGCGCAGG TTTTCCAGTTTATGG pmbA 4812584 - 4813936 + | protein PmbA TERM 6289 4813963 - 4813942 - f 100 -10.1 -5.52384 | overlap 4813943 CGGGCAGTAAAAAAA CTGGCGCGA CCTG CCGCGCCAA ATCTCCATAATAAAA TERM 6290 4813962 - 4813943 - f 91 -11.4 -3.90707 | overlap 4813942 GGGCAGTAAAAAAAC TGGCGCGA CCTG CCGCGCCA AATCTCCATAATAAA cybC 4813992 - 4814378 + | soluble cytochrome b562 TERM 6291 4814383 - 4814414 + F 70 -5.8 -4.35604 | opp_overlap 4814399, overlap 4814384 4814385 AGTATCGTTAATTCC TTATTGGGCGGTGA AACG TTACCGCCCAACGC TTTCTTCTCCCTTCG TERM 6292 4814384 - 4814413 + F 70 -9.3 -3.20639 | opp_overlap 4814399, overlap 4814383 4814385 GTATCGTTAATTCCT TATTGGGCGGTGA AACG TTACCGCCCAACG CTTTCTTCTCCCTTC TERM 6293 4814385 - 4814412 + F 74 -10.6 -2.51661 | opp_overlap 4814399, overlap 4814384 4814383 TATCGTTAATTCCTT ATTGGGCGGTGA AACG TTACCGCCCAAC GCTTTCTTCTCCCTT relB 4814570 - 4814812 + | addiction module antitoxin RelB relE 4814802 - 4815092 + | addiction module toxin RelE nrdG 4815557 - 4815093 - | anaerobic ribonucleoside-triphosphate reductase activating protein NrdG nrdD 4817880 - 4815742 - | anaerobic ribonucleoside-triphosphate reductase TERM 6294 4816908 - 4816918 + g 77 -6.8 -4.56775 | GTTTCGGGAACACCG CCGT TTT ACGG TTTTTACCGAGGCCT TERM 6295 4817571 - 4817598 + g 77 -6.2 -4.67234 | gap 1, opp_overlap 4817570 4817573, overlap 4817573 TCTGCTCGACCAGAC CACGGATCTCCTG GTT CAGGCGA-CCGCG TTTTTCACGTTCAAT EcSMS35_4719 4817920 - 4818042 + | hypothetical protein TERM 6296 4818261 - 4818236 - T 84 -9.8 -4.2349 | gap 1 TGCTGACAGGCAAAA CCCCGG-AATG ACAGG CATTACCGGGG CTTAGCGAAGATTTA treC 4819929 - 4818274 - | alpha,alpha-phosphotrehalase TERM 6297 4818385 - 4818399 + g 75 -11.4 -3.1247 | GTTGCCGAGCATTTT CCCTGG CTG CCAGGG TTGGGTCTCACGGCT TERM 6298 4818988 - 4818976 - G 72 -7.7 -3.87104 | opp_overlap 4818973 GTTACACCAGAACAA GGCAT TCC ATGCC ACGTTGTGCATTCCT treB 4821400 - 4819979 - | PTS system, trehalose-specific IIBC component TERM 6299 4821479 - 4821466 - R 87 -8.1 -4.92239 | GGAAAAATTTAAAAA CGGGA ACGT TCCCG AAACGCAGCGAAGAT treR 4822466 - 4821519 - | trehalose operon repressor TERM 6300 4823178 - 4823194 + G 70 -5.1 -4.41348 | ATTCTCGGCGCTATT TCTTACG CCA CGGAAGA TTTATTTGCCGCGGG mgtA 4822845 - 4825541 + | magnesium-translocating P-type ATPase TERM 6301 4825734 - 4825715 - T 78 -10.7 -3.14468 | opp_overlap 4825715 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA TERM 6302 4825715 - 4825734 + T 83 -10.7 -3.65827 | opp_overlap 4825715 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA EcSMS35_4724 4826172 - 4825747 - | putative endoribonuclease L-PSP TERM 6303 4826162 - 4826187 + g 100 -10.5 -4.63218 | opp_overlap 4826162 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG TERM 6304 4826187 - 4826162 - G 100 -10.5 -4.61231 | opp_overlap 4826162 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG pyrI 4826667 - 4826206 - | aspartate carbamoyltransferase, regulatory subunit pyrB 4827615 - 4826680 - | aspartate carbamoyltransferase, catalytic subunit TERM 6305 4826739 - 4826774 + g 72 -6 -4.38712 | GGCGAGCGAAAATCC CGTTGCCTGCCTGCTG GAAG TACCAGGCGTGCGGCG TTTTATCAACATCGG TERM 6306 4827350 - 4827360 + g 71 -2.4 -5.02074 | GAAATGGTATCGGCC AGCG TTT CGCC TTTTTTACCCAGTGA TERM 6307 4827664 - 4827647 - R 100 -12.7 -5.75342 | CCTGGGCAAAAAAAA GCCCCTC GATT GAGGGGC TGGGAATGGGTGATC EcSMS35_4727 4827929 - 4827786 - | hypothetical protein TERM 6308 4827922 - 4827936 + g 100 -2.8 -5.93252 | TCGGTATCAATAATT GCAG ACATTTC CTGC TTTTTTCTTTTTCAC EcSMS35_4728 4828429 - 4828034 - | endoribonuclease L-PSP family protein TERM 6309 4828541 - 4828516 - R 91 -8.3 -4.93877 | opp_overlap 4828515 4828516 CGTGAGTAAACAAAA CCCAGACATCA TGGA TAATGGCTGGG CTTAATTGAGCGTAG EcSMS35_4729 4829274 - 4828561 - | short chain dehydrogenase/reductase family oxidoreductase EcSMS35_4730 4829345 - 4829938 + | TetR family transcriptional regulator EcSMS35_4731 4829938 - 4830066 + | hypothetical protein EcSMS35_4732 4830083 - 4830535 + | hypothetical protein TERM 6310 4830888 - 4830874 - T 71 -7.8 -3.74693 | GTGGATTTTAGCAAA CGCTCC AAC GAAGCG GGAAGAAATATGATG TERM 6311 4831685 - 4831646 - T 71 -4.4 -4.63218 | gap 1 GGTGTTTTAATAAAA GCATGCAATAT-TTTGATG ATT CAGCAAAGATAAAGCATGC ATGCTCTGTGATAAA argF 4833387 - 4832383 - | ornithine carbamoyltransferase EcSMS35_4735 4833549 - 4833965 + | hypothetical protein TERM 6312 4833980 - 4834005 + T 100 -9 -5.47399 | opp_overlap 4833980 ATTAATTGATTAAAA TGCCCGATAG CACATA CTAGCGGGCA TTTTTTTAGAGTTCG TERM 6313 4834005 - 4833980 - T 86 -9.7 -4.31379 | opp_overlap 4833980 ATTAATTGATTAAAA TGCCCGATAGC ACAT ACTAGCGGGCA TTTTTTTAGAGTTCG EcSMS35_4736 4834514 - 4834011 - | acetyltransferase TERM 6314 4835861 - 4835850 - g 70 -5.8 -4.17263 | opp_overlap 4835849 GAACAACCAGATAAA GGCT TCTT AGCC AGTATTTCACGGGGA EcSMS35_4737 4834680 - 4835903 + | hypothetical protein TERM 6315 4835915 - 4835934 + T 85 -10.6 -3.71672 | opp_overlap 4835915, overlap 4835911 GTAAGAGATAAAAAA GGCCGGCG CATG CTCCGGCC TTCGTTTTCATCACG TERM 6316 4835934 - 4835915 - T 100 -10.6 -5.47431 | opp_overlap 4835915 4835911 GTAAGAGATAAAAAA GGCCGGCG CATG CTCCGGCC TTCGTTTTCATCACG valS 4838812 - 4835957 - | valyl-tRNA synthetase TERM 6317 4837317 - 4837337 + g 74 -7.5 -4.07568 | overlap 4837319 ACGCTGGTTGGGTGG AACTGACGC AGG GCGTCGGTA TTTTCCGGCCAGCCA TERM 6318 4837319 - 4837335 + g 77 -10.1 -3.63744 | overlap 4837317 GCTGGTTGGGTGGAA CTGACGC AGG GCGTCGG TATTTTCCGGCCAGC TERM 6319 4838581 - 4838597 + g 72 -4.3 -4.62783 | overlap 4838584 CGGCGTGGTCAGTAC CGACCTG CCA CAGGGTG TTTTTACCCTGCATA holC 4839294 - 4838812 - | DNA polymerase III, chi subunit TERM 6320 4838976 - 4838994 + g 70 -4.5 -4.56597 | gap 1, opp_overlap 4838976 GACTAATCAATATAT CGC-GCGG GCTG CTGCTGCG TTTTTGCGGCCAGGC pepA 4840900 - 4839389 - | leucyl aminopeptidase TERM 6321 4839438 - 4839463 + g 70 -4.5 -4.54727 | opp_overlap 4839440, overlap 4839439 4839440 AGGAACTGTGCCAGC AACGCTACCGG ACGA CCGGTTGCGCC TTTTGCTTTACCAGA TERM 6322 4839461 - 4839440 - G 77 -11.5 -3.14881 | opp_overlap 4839439 4839438 4839440 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTTGCG CCTTTTGCTTTACCA TERM 6323 4839440 - 4839461 + g 73 -11.5 -2.5893 | opp_overlap 4839440, overlap 4839439 4839438 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTTGCG CCTTTTGCTTTACCA EcSMS35_4741 4841253 - 4841125 - | hypothetical protein TERM 6324 4842038 - 4842052 + GH 77 -11.4 -2.65264 | TGAGCGTGGTTAACC CGCGTC AGG GACGCG TACTATCGATGCTGC EcSMS35_4742 4841167 - 4842267 + | putative permease EcSMS35_4743 4842267 - 4843349 + | putative permease TERM 6325 4843358 - 4843373 + T 89 -10.4 -4.57882 | opp_overlap 4843358 ATCGTAATCTAACAA GGGAGC GAAA GCTCCC TTTATTATTGTTGAC TERM 6326 4843373 - 4843358 - T 80 -10.4 -3.73336 | opp_overlap 4843358 ATCGTAATCTAACAA GGGAGC GAAA GCTCCC TTTATTATTGTTGAC EcSMS35_4744 4844970 - 4843468 - | hypothetical protein TERM 6327 4844011 - 4843997 - G 70 -7 -4.07568 | overlap 4844006 TCTTTTGGCGTAAAA GCCCGC AAA GCGTGC TGAACGCGATTACCT idnR 4846046 - 4845048 - | transcriptional regulator IdnR idnT 4847432 - 4846113 - | Gnt-II system L-idonate transporter TERM 6328 4847479 - 4847462 - R 100 -12.7 -4.3898 | ATTAGTGCCAGAAAA GCAGCGC TTTC GCGCTGC ACGTAGGGTAGTAGG idnO 4848261 - 4847497 - | gluconate 5-dehydrogenase TERM 6329 4847969 - 4847983 + g 73 -9.2 -3.61398 | GTAAAAGGATGACGG CGCTGG ATA CCGGCG TTATTCACCAGCACA TERM 6330 4848094 - 4848105 + g 81 -5.8 -4.82901 | overlap 4848093 AACGGCCTGAATACC CTCC TGGT GGAG TTTTTCTACAGCAAG idnD 4849316 - 4848285 - | L-idonate 5-dehydrogenase idnK 4849533 - 4850096 + | thermosensitive gluconokinase EcSMS35_4750 4851119 - 4850100 - | zinc-binding dehydrogenase family oxidoreductase TERM 6331 4851414 - 4851429 + H 100 -9 -5.64274 | opp_overlap 4851412 4851403 4851414 AAAAGTATGTAAATA GACCTC AACT GAGGTC TTTTTTTATGCCTGA TERM 6332 4851429 - 4851414 - H 73 -9 -3.45527 | opp_overlap 4851414, overlap 4851412 4851403 AAAAGTATGTAAATA GACCTC AACT GAGGTC TTTTTTTATGCCTGA TERM 6333 4851933 - 4851918 - g 77 -3.2 -5.1356 | TGGCACCAATAAAAA GTGGTC TGAA GATCAC GCCCATCGTGTGCTA TERM 6334 4852430 - 4852418 - g 84 -7.7 -4.61633 | opp_overlap 4852406 4852418 ATAGAGGCTCAAAAA TGCGT ACA ACGCA TCTAGTGCCTCTTTC EcSMS35_4753 4851586 - 4852851 + | phage integrase family site specific recombinase TERM 6335 4852882 - 4852846 - T 74 -6.6 -4.32651 | gap 1, opp_overlap 4852853 4852854, overlap 4852848 4852855 AATAATCCATTAAAA CAGTAATCATCCCGGGC AAAT GCCCGGGA-ACTTACTC CATGAATATTTTCTT TERM 6336 4852880 - 4852848 - T 77 -9.2 -3.75571 | gap 1, opp_overlap 4852853 4852854, overlap 4852846 4852855 TAATCCATTAAAACA GTAATCATCCCGGGC AAAT GCCCGGGA-ACTTAC TCCATGAATATTTTC TERM 6337 4852854 - 4852875 + T 77 -11.5 -2.51133 | opp_overlap 4852848 4852846 4852855, overlap 4852853 ATTAAAACAGTAATC ATCCCGGGC AAAT GCCCGGGAA CTTACTCCATGAATA TERM 6338 4852874 - 4852855 - T 89 -15 -2.89607 | opp_overlap 4852854 4852853, overlap 4852848 4852846 TTAAAACAGTAATCA TCCCGGGC AAAT GCCCGGGA ACTTACTCCATGAAT TERM 6339 4853053 - 4853028 - T 100 -10.5 -5.38321 | gap 1 AAACATCATAAAAAA TCCCGCACCCAC AGG GTGA-TGCGGGA TAACTGACGTAAGGA EcSMS35_4754 4854674 - 4853175 - | sulfatase family protein TERM 6340 4854023 - 4854001 - G 75 -5.5 -4.67607 | gap 1 CCGTCAATAAATAAA CCGGGAGCTG TATT CAGC-CACGG CGTGGTTGGCACGGG TERM 6341 4854651 - 4854632 - G 93 -6.4 -5.18715 | ATAAAAACAATAAAA TCCGGG GTGTGTTT CCCGGA CAAAACAGTTTTCTG TERM 6342 4854753 - 4854722 - R 74 -2.4 -5.2291 | gap 1, opp_overlap 4854741 4854746 4854748, overlap 4854729 4854748 ACAGGATAATAAAAA TCAGAAATTATCTGT GAA ACAGATAA-CCCTGC AGTAATAGACTGCAG TERM 6343 4854747 - 4854729 - R 85 -9 -4.30635 | opp_overlap 4854741 4854746, overlap 4854722 AATAAAAATCAGAAA TTATCTGT GAA ACAGATAA CCCTGCAGTAATAGA TERM 6344 4854741 - 4854778 + r 93 -12.2 -3.90112 | gap 1, opp_overlap 4854729 4854722 4854748, overlap 4854746 4854748 AAATTATCTGTGAAA CAGATA-ACCCTGCAGT AATAG ACTGCAGGGTATTTCTG TTTAATTGCAGAAGA TERM 6345 4854746 - 4854772 + r 90 -10.9 -4.40184 | opp_overlap 4854729 4854722 4854748, overlap 4854741 4854748 ATCTGTGAAACAGAT AACCCTGCAGT AATAG ACTGCAGGGTA TTTCTGTTTAATTGC TERM 6346 4854748 - 4854770 + r 100 -13.5 -3.79096 | opp_overlap 4854722 4854748, overlap 4854746 4854741 CTGTGAAACAGATAA CCCTGCAGT AATAG ACTGCAGGG TATTTCTGTTTAATT TERM 6347 4854770 - 4854748 - R 100 -13.5 -3.76232 | opp_overlap 4854748 4854746 4854741, overlap 4854722 CTGTGAAACAGATAA CCCTGCAGT AATAG ACTGCAGGG TATTTCTGTTTAATT EcSMS35_4755 4855639 - 4854848 - | heat resistant agglutinin 1 TERM 6348 4855338 - 4855316 - G 70 -6.3 -4.15565 | overlap 4855317 TCCACGAGCGTAAAA CTCCAGTTC CGTAC GAACCGGAA TACTGAACTGCGGGT EcSMS35_4757 4856514 - 4856011 - | IS1 transposase orfB EcSMS35_4758 4856737 - 4856525 - | IS1 transposase orfA EcSMS35_4759 4856981 - 4857478 + | addiction module antitoxin EcSMS35_4760 4857545 - 4859524 + | type I restriction-modification system DNA methylase EcSMS35_4761 4859524 - 4860810 + | type I restriction modification DNA specificity domain-containing protein TERM 6349 4861320 - 4861294 - g 70 -3.7 -4.65895 | overlap 4861318 CCGCCGAGCTAAAAA CCGATTTTACC CAGTC GCTAGAATCGG CGATTGCGCAGTACA EcSMS35_4762 4860810 - 4864046 + | type I restriction-modification system endonuclease EcSMS35_4763 4864046 - 4864600 + | hypothetical protein EcSMS35_4764 4864603 - 4865442 + | hypothetical protein TERM 6350 4865503 - 4865513 + G 75 -5.4 -4.67697 | ACATCCCACAAGCTC CTCA AGG TGAG TTTGTTCTTTTCACC EcSMS35_4765 4865478 - 4866512 + | hypothetical protein TERM 6351 4866522 - 4866555 + T 76 -10.3 -3.34043 | opp_overlap 4866521 4866524 4866526, overlap 4866524 AAATAGCCGATATAG TACAGCCCTGATCTC TAAT GAGTTGAGGGCTGTG TTGTAAGATCATAAC TERM 6352 4866553 - 4866524 - T 74 -10.7 -2.69977 | opp_overlap 4866522 4866524, overlap 4866521 4866526 ATAGCCGATATAGTA CAGCCCTGATCTC TAAT GAGTTGAGGGCTG TGTTGTAAGATCATA TERM 6353 4866524 - 4866553 + T 78 -10.7 -3.23869 | opp_overlap 4866524 4866521 4866526, overlap 4866522 ATAGCCGATATAGTA CAGCCCTGATCTC TAAT GAGTTGAGGGCTG TGTTGTAAGATCATA EcSMS35_4766 4866956 - 4866570 - | hypothetical protein EcSMS35_4767 4867246 - 4867046 - | hypothetical protein EcSMS35_4768 4867751 - 4868083 + | hypothetical protein TERM 6354 4868741 - 4868725 - T 77 -9.5 -3.5882 | opp_overlap 4868719 CAGAGTATGGGTAAA CCAGTTT TGT AAACTGG TACAACTTTGAACAT EcSMS35_4770 4869703 - 4869080 - | hypothetical protein EcSMS35_4771 4870776 - 4869886 - | IS1203 transposase orfB TERM 6355 4870453 - 4870465 + g 70 -4.8 -4.56597 | GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA EcSMS35_4772 4871098 - 4870757 - | IS1203 transposase orfA EcSMS35_4773 4871403 - 4871104 - | hypothetical protein TERM 6356 4871697 - 4871738 + r 76 -8.3 -3.90045 | gap 1, opp_overlap 4871701 4871704, overlap 4871701 4871704 CATTTAAATTATTAA AGAATT-ACATTGTGGTGAA ATA TTCACCACAATGTTAATTAG TTCTCTTTAGTATTG TERM 6357 4871733 - 4871701 - R 100 -15.1 -4.06533 | opp_overlap 4871697 4871701 4871704, overlap 4871704 TAAATTATTAAAGAA TTACATTGTGGTGAA ATA TTCACCACAATGTTA ATTAGTTCTCTTTAG TERM 6358 4871701 - 4871734 + r 100 -13.5 -3.59031 | gap 1, opp_overlap 4871701 4871704, overlap 4871697 4871704 TAAATTATTAAAGAA TT-ACATTGTGGTGAA ATA TTCACCACAATGTTAA TTAGTTCTCTTTAGT TERM 6359 4871730 - 4871704 - R 100 -16.8 -3.05471 | opp_overlap 4871701 4871697 4871704, overlap 4871701 ATTATTAAAGAATTA CATTGTGGTGAA ATA TTCACCACAATG TTAATTAGTTCTCTT TERM 6360 4871704 - 4871730 + r 100 -16.8 -3.49738 | opp_overlap 4871704 4871701, overlap 4871701 4871697 ATTATTAAAGAATTA CATTGTGGTGAA ATA TTCACCACAATG TTAATTAGTTCTCTT EcSMS35_4775 4872100 - 4871735 - | hypothetical protein EcSMS35_4777 4872207 - 4873415 + | IS10 transposase EcSMS35_4776 4874056 - 4873394 - | hypothetical protein TERM 6361 4873430 - 4873441 + g 77 -5.8 -4.67552 | AGGGGATCTCTCAGT GCCA AGCA TGGC TTCTTTTTTGATAAC EcSMS35_4778 4874674 - 4874066 - | hypothetical protein TERM 6362 4874763 - 4874746 - R 89 -2.7 -5.73978 | opp_overlap 4874747, overlap 4874747 AGTAGAAATAAAAAA CTCTCTT CAAG AAGAGAT ACATTTAATTTTAGT EcSMS35_4780 4875776 - 4875264 - | hypothetical protein TERM 6363 4875748 - 4875730 - G 70 -3.7 -4.63218 | overlap 4875731 GCCTGCTGAACAAAA CGCCGGA TGTCT CCCGGCT CTGCAAGTAATGCTT EcSMS35_4781 4875995 - 4875858 - | hypothetical protein EcSMS35_4782 4876266 - 4876033 - | AlpA family transcriptional regulator EcSMS35_4783 4876910 - 4876335 - | hypothetical protein EcSMS35_4784 4877723 - 4877157 - | hypothetical protein TERM 6364 4878184 - 4878174 - R 77 -3.2 -5.23316 | TACCAGAGTAAAAAA TACC ACT GGCA TGATTTTTACCCTGC EcSMS35_4786 4880102 - 4879662 - | H-NS histone family protein TERM 6365 4881152 - 4881138 - R 70 -7.2 -3.86795 | opp_overlap 4881132 4881131, overlap 4881133 AAAAAATTTAGTAAA CCAATA TCA TATTGG TATACCGTTGTTGTA EcSMS35_4789 4882557 - 4881859 - | hypothetical protein TERM 6366 4882137 - 4882157 + g 82 -7.5 -4.4648 | opp_overlap 4882137, overlap 4882141 TTCCTTCAAATACAT GGAGGTCGG CAG CCGACGTTC TTTTCTGATGCCACT EcSMS35_4790 4882614 - 4882940 + | IS1203 transposase orfA TERM 6367 4883260 - 4883248 - g 70 -4.8 -4.56597 | TCTCCGGGGTAAAAA GGTC CGTAC GACC ATCAGCCGGAAAGCC EcSMS35_4791 4882937 - 4883827 + | IS1203 transposase orfB EcSMS35_4792 4884381 - 4884268 - | hypothetical protein EcSMS35_4793 4885109 - 4884378 - | hypothetical protein EcSMS35_4794 4885293 - 4885445 + | hypothetical protein TERM 6368 4885561 - 4885549 - T 72 -3.4 -4.9218 | TACGCACCATAAAAA CGAT TAACC ATCG ATAACGTAAACTTCA EcSMS35_4795 4887718 - 4886588 - | hypothetical protein TERM 6369 4887095 - 4887079 - G 73 -3.7 -4.76423 | opp_overlap 4887081, overlap 4887074 4887081 CACAAACAGACAAAA CAGTCTT ATA AAGACTT TTTGAATCACTATAT TERM 6370 4887081 - 4887093 + g 77 -6.3 -4.67755 | opp_overlap 4887081 4887079 4887074 CAAACAGACAAAACA GTCTT ATA AAGAC TTTTTGAATCACTAT EcSMS35_4796 4887909 - 4887775 - | hypothetical protein TERM 6371 4887876 - 4887858 - GH 74 -7.4 -4.0616 | opp_overlap 4887858, overlap 4887854 TACCTGAATGATAAA CCGGATTA GTG TGATCCGG TTCAGTGAAATCAAC TERM 6372 4887858 - 4887876 + gH 71 -9.6 -3.06796 | opp_overlap 4887858 4887854 TACCTGAATGATAAA CCGGATTA GTG TGATCCGG TTCAGTGAAATCAAC TERM 6373 4888337 - 4888351 + GH 71 -2.1 -4.91194 | gap 1, opp_overlap 4888336, overlap 4888332 TTTACTGAATGAAGG CGCAGA TCCC TC-GCG TTTTCTGTTTGTTCT EcSMS35_4797 4887903 - 4888787 + | putative GTPase EcSMS35_4798 4888806 - 4888961 + | hypothetical protein TERM 6374 4889595 - 4889606 + G 74 -5.8 -4.52857 | CATCCACAGTCTGGT CGCT GAAG AGCG TTTTATCTCCGCCCT EcSMS35_4799 4888990 - 4889670 + | hypothetical protein EcSMS35_4800 4889713 - 4890495 + | hypothetical protein EcSMS35_4801 4890585 - 4890734 + | hypothetical protein TERM 6375 4890756 - 4890783 + F 100 -19.2 -4.61873 | TCATTTCATCCATCA GGCCGCGTCTTC TCCG GGAGACGCGGCC TTTTCGTTTATACCG EcSMS35_4802 4890824 - 4891642 + | hypothetical protein EcSMS35_4803 4891734 - 4892219 + | antirestriction protein EcSMS35_4804 4892234 - 4892710 + | RadC family DNA repair protein EcSMS35_4805 4892797 - 4893018 + | hypothetical protein TERM 6376 4893351 - 4893314 - g 74 -8.5 -4.00042 | gap 1 CTGCTGATGAAACAA CTGGAACTCATGCTCACC AGC GGTGAAC-TGAATCCCCG CCATCAGCATACCGT EcSMS35_4806 4893218 - 4893466 + | hypothetical protein TERM 6377 4893491 - 4893512 + F 70 -10.1 -2.55811 | overlap 4893490 4893489 ATAACCTTCTTCTCC GGCCTGGTG CTTT CACCACGCC ACTTTTCCATTTTTC TERM 6378 4893778 - 4893763 - g 82 -7.6 -4.56597 | TTTCTCGTTGAAAAA TACGCA CTGG TGCGTA CCGACCAGCCGGGAT EcSMS35_4807 4893556 - 4893933 + | hypothetical protein EcSMS35_4808 4893930 - 4894418 + | hypothetical protein EcSMS35_4809 4894438 - 4894635 + | hypothetical protein TERM 6379 4894665 - 4894687 + T 100 -12.7 -4.65153 | ACTTCATTCCACTGA CGCCAGCCT GAACA GGGCTGGCG TTTTCATTTATCTGC TERM 6380 4895159 - 4895144 - T 73 -9 -3.45527 | opp_overlap 4895144, overlap 4895142 4895133 AAAAGTATGTAAATA GACCTC AACT GAGGTC TTTTTTTATGCCTGA TERM 6381 4895144 - 4895159 + T 100 -9 -5.64274 | opp_overlap 4895144 4895142 4895133 AAAAGTATGTAAATA GACCTC AACT GAGGTC TTTTTTTATGCCTGA TERM 6382 4896310 - 4896327 + T 73 -9.1 -3.48772 | opp_overlap 4896310 4896307 CGAACTGTTAAAGAT GTCTGCC GGGA GGCAGGC TTCTCTGAGCCACTT EcSMS35_4812 4897522 - 4896629 - | hypothetical protein TERM 6383 4896914 - 4896888 - G 70 -5.1 -4.37886 | gap 1 GGATTGGCTATAAAA CGCACGGG-GAT TATG ACCTCCCACGCG GTATCTTTGCGTGGC TERM 6384 4897650 - 4897628 - H 100 -12.2 -5.38054 | opp_overlap 4897632 TGCTATAAATAAAAA TTAAGCAAAG TTT CTTTGCTTAA TTGGCGGGCGAGTAC EcSMS35_4813 4897698 - 4899164 + | hypothetical protein EcSMS35_4814 4899167 - 4900063 + | hypothetical protein TERM 6385 4902567 - 4902555 - g 76 -7.7 -4.20042 | ATTAATACTGGAAAA TGCTG ATG CAGCA CTTAAGCAAGCTGAG EcSMS35_4815 4900066 - 4904502 + | hypothetical protein EcSMS35_4816 4904515 - 4905570 + | hypothetical protein TERM 6386 4906060 - 4906050 - g 82 -2.4 -5.42198 | TTTGAAAAAACAAAA CTGC GAT GCCG ATGCGAAAGAAAAAA EcSMS35_4817 4905697 - 4906695 + | hypothetical protein EcSMS35_4818 4907679 - 4906807 - | hypothetical protein EcSMS35_4819 4907642 - 4907764 + | hypothetical protein TERM 6387 4908093 - 4908083 - g 74 -8.2 -3.99592 | opp_overlap 4908087 4908089, overlap 4908084 ATTCATCAGGATAAA GCCG CTG CGGC TCCCATAGCCGACGT EcSMS35_4820 4907816 - 4908457 + | HNH endonuclease domain-containing protein TERM 6388 4909247 - 4909274 + T 100 -13.6 -3.63968 | overlap 4909248 AAAATTTTATTTATC TTCCGTGAAAGT CTTA ACTTTCACGGAG TTTCGGAATTTACAA TERM 6389 4909248 - 4909273 + T 89 -14.9 -2.7806 | overlap 4909247 AAATTTTATTTATCT TCCGTGAAAGT CTTA ACTTTCACGGA GTTTCGGAATTTACA EcSMS35_4822 4910387 - 4909284 - | hypothetical protein TERM 6390 4909905 - 4909893 - G 100 -6.3 -5.48303 | ATAATCTGAAAAAAA CTCAT TTA ATGAG AATGATTTAAAAATC EcSMS35_4823 4911098 - 4910391 - | hypothetical protein TERM 6391 4910705 - 4910726 + g 85 -10.3 -4.18018 | opp_overlap 4910704 4910702 GGACTTCAGTAATAT GTTCTTGAT AATT ATCAAGAAC TTTTAGGTAGCGAGG TERM 6392 4911037 - 4911005 - G 79 -3.5 -5.13344 | gap 1, opp_overlap 4911035 ATATGAACATAAAAA CCATCATCAGCCCT GCCATT AGGTCTGAC-ATGG ATACCCAGTGTTCAT EcSMS35_4824 4912757 - 4911105 - | hypothetical protein TERM 6393 4915212 - 4915223 + G 72 -4.4 -4.63218 | ACTCAGTATTAAACG CTAC GATG GTAG TTTTATTGAACACGA TERM 6394 4916105 - 4916119 + G 71 -2.8 -4.75404 | CTAGTGCGATTACTC CAGAGT TAA AATCTG TTTTTAATAAGCTTT EcSMS35_4825 4912969 - 4916328 + | hypothetical protein TERM 6395 4918619 - 4918609 - g 78 -5.4 -4.81814 | ATCAGCAGAAGAAAA CCAT GTC ATGG CAAACACTGTCTGAA TERM 6396 4921594 - 4921630 + G 70 -6.6 -4.09685 | gap 1, opp_overlap 4921623, overlap 4921595 AGATTTATGACTCCT GCTCGCTGGTTCTTGCG GGGC CGCAGGAAC-AGTGGGA TTTTGCCCAATGGCC EcSMS35_4827 4916328 - 4922642 + | DEAD/DEAH box helicase domain-containing protein EcSMS35_4826 4922745 - 4922629 - | hypothetical protein TERM 6397 4922672 - 4922690 + g 80 -5.2 -4.88129 | overlap 4922674 GAGGATATCTTCCAG GGGAGTTG ACC CAGCTCAC TTTTTAATAATTTTT TERM 6398 4922760 - 4922789 + H 95 -8.5 -5.252 | overlap 4922756 TTTTGTCACTTTGCC GGGGGCCTTCATG ATAT CTTTAAGGCCCTC TTTTTTATCGCAGTG TERM 6399 4924318 - 4924290 - g 71 -10.9 -2.88653 | overlap 4924287 4924295 GAAATTGAAAGATGA TCAGATCGCCACG CTG CGCGGCGATCAGG GCGATACGGTGTTGA TERM 6400 4924313 - 4924295 - g 78 -12.4 -2.8789 | overlap 4924290 4924287 TGAAAGATGATCAGA TCGCCACG CTG CGCGGCGA TCAGGGCGATACGGT EcSMS35_4828 4922866 - 4925724 + | helicase family protein TERM 6401 4926276 - 4926252 - g 83 -6.3 -5.00884 | opp_overlap 4926275 AGCCTGCGCAAAAAA GCCAACGGTGA ATA TCGCAGCTGGC AGGATCTGCTCTCTA EcSMS35_4829 4925727 - 4930649 + | hypothetical protein TERM 6402 4931648 - 4931667 + G 72 -10.8 -3.01791 | overlap 4931650 CTGGACCCGCAGAGT TACGCTAC CCCG GTAGCGTA TCTTAACGGGCAAAT TERM 6403 4932058 - 4932088 + G 93 -13.3 -3.5882 | gap 1 GATGCGTCGTCTGGT CGCCAG-CGTGGCG AAAA CGCCGCGACTGGTG TTTGCCGATGATGTG TERM 6404 4935616 - 4935648 + G 79 -12.1 -3.06302 | CCGCGATCAGGCGCG TCTCTTGCTGGCGAA AAT TTTGCAGGCAAGAGA TTCGATACGGGTAAT TERM 6405 4936363 - 4936348 - g 70 -5.4 -4.33165 | gap 1, opp_overlap 4936348, overlap 4936349 4936350 TGAAATGCAGGAAAA CGCGCCA GCC TGGCG-G CTAGCAGAGCTTTTG TERM 6406 4936688 - 4936662 - g 76 -9.4 -3.74872 | overlap 4936680 ATTTACCGCAGGAAA GCGTTGACGTTA AAG TTACGGCAACGC CAGAGGCAGTACCAG EcSMS35_4830 4930649 - 4936990 + | DEAD/DEAH box helicase domain-containing protein EcSMS35_4831 4936987 - 4939101 + | ATP-dependent DNA helicase UvrD TERM 6407 4939145 - 4939116 - T 100 -14.4 -3.57883 | opp_overlap 4939118 4939120, overlap 4939108 4939118 ATAATATGTCCGAAA CAGACCAGGAGC CGAAAC GCTCCTGGTCTA TATAACCGTTCTGGC TERM 6408 4939143 - 4939118 - T 100 -14.8 -3.36341 | opp_overlap 4939118 4939120, overlap 4939108 4939116 AATATGTCCGAAACA GACCAGGAGC CGAAAC GCTCCTGGTC TATATAACCGTTCTG TERM 6409 4939118 - 4939143 + T 89 -14.8 -2.90219 | opp_overlap 4939108 4939116 4939118, overlap 4939120 AATATGTCCGAAACA GACCAGGAGC CGAAAC GCTCCTGGTC TATATAACCGTTCTG TERM 6410 4939120 - 4939141 + T 79 -11.6 -2.99947 | opp_overlap 4939118 4939116, overlap 4939118 TATGTCCGAAACAGA CCAGGAGC CGAAAC GCTCCTGG TCTATATAACCGTTC EcSMS35_4832 4940265 - 4939615 - | hypothetical protein TERM 6411 4940100 - 4940090 - G 72 -6.8 -4.18908 | opp_overlap 4940090 ACAGTCGTAAAATAA CCAG ACT CTGG TGTATAAAAATCTTC TERM 6412 4940458 - 4940425 - H 76 -8.8 -3.92641 | opp_overlap 4940425 AAGGCCAGTCAGAAA CACAATGCCGTCAC TTAAGC GGGGCGGCACTGTG TTTCACCGGATAACG TERM 6413 4940425 - 4940458 + H 71 -8.8 -3.54424 | opp_overlap 4940425 AAGGCCAGTCAGAAA CACAATGCCGTCAC TTAAGC GGGGCGGCACTGTG TTTCACCGGATAACG EcSMS35_4833 4941036 - 4941221 + | hypothetical protein EcSMS35_4834 4942219 - 4941239 - | hypothetical protein TERM 6414 4942276 - 4942257 - R 79 -12.1 -2.69246 | opp_overlap 4942250 4942249, overlap 4942252 4942249 GACAAATTGATAGCA GGGCCCC TTTACC GGGGCCC TGAAGCGTTAGTTTT EcSMS35_4835 4943390 - 4942284 - | kelch repeat-containing protein TERM 6415 4942513 - 4942527 + g 70 -5 -4.4648 | TCATGCGCATAGTTC TTACCG TTC TGGTAA TTTTCTCGTGAACCT nanC 4944126 - 4943410 - | N-acetylneuraminic acid porin NanC TERM 6416 4944720 - 4944730 + r 70 -2.6 -4.89521 | overlap 4944725 TCTTTTAACTATCTG TTTT ATA AAAA TTTTATTTAGAATCT EcSMS35_4837 4944928 - 4944767 - | hypothetical protein TERM 6417 4945875 - 4945901 + G 81 -5.8 -4.85599 | AGTATCCGTACTTCT TATCCGCATGCT GAG AGCGAGTGGGTA TTTTTATCACGTAAG fimB 4945581 - 4946183 + | type 1 fimbriae regulatory protein FimB TERM 6418 4946163 - 4946175 + F 85 -9.1 -4.3898 | opp_overlap 4946160 AGAGCCAGAGGACGA CAGCG TCA CGCTG TTTTATAGAGATAGT TERM 6419 4946496 - 4946511 + F 83 -4 -5.38839 | opp_overlap 4946491, overlap 4946498 AATGAAAATAGATGT TGTCAC ATCG GTGATA TTTTATTTTTGTATG TERM 6420 4946546 - 4946575 + F 79 -5.1 -5.10064 | gap 1 TTAATGTAATTGACT GATAGCCACATCAC TTC GTG-TATGGTTATC TTTTTATCTATTGGG fimE 4946661 - 4947257 + | type 1 fimbriae regulatory protein FimE EcSMS35_4840 4947738 - 4948286 + | type-1 fimbrial protein EcSMS35_4842 4948393 - 4948890 + | type-1 fimbrial protein EcSMS35_4841 4949003 - 4948884 - | hypothetical protein TERM 6421 4949095 - 4949083 - gH 78 -6.3 -4.62069 | CCGGCAGGGCAAAAA CAAGT GCA ACTTG CCGTGACAAATAATG TERM 6422 4949238 - 4949218 - gH 88 -2.6 -5.54192 | opp_overlap 4949220, overlap 4949220 ATGAAGGGAAAAAAA GAGAATAC CTTAC GTATTCTT GATGCAACAAATAAC TERM 6423 4949236 - 4949220 - gH 70 -5.2 -4.40173 | opp_overlap 4949220, overlap 4949218 GAAGGGAAAAAAAGA GAATAC CTTAC GTATTC TTGATGCAACAAATA fimC 4949002 - 4949652 + | chaperone protein FimC TERM 6424 4949812 - 4949840 + G 83 -10.3 -4.0162 | TTTGTCCGGCTCTTT GTTGCCTGTGC TTTTGCC GCACAGGCACC TTTGTCATCTGCCGA fimD1 4949785 - 4952355 + | outer membrane usher protein fimD TERM 6425 4952428 - 4952457 + G 82 -12.9 -2.8805 | GTAAGTCACGCTTTG GCTGCGGATAGCA CGAT TACTATCCGCGGC TATGTCAGAGATAAT fimF 4952365 - 4952895 + | fimbrial protein FimF fimG 4952908 - 4953411 + | protein fimG TERM 6426 4953537 - 4953507 - g 70 -6.9 -4.07885 | gap 1, opp_overlap 4953529 4953531 CATTCGCCTGTAAAA CCGCCAAT-GGTAC CGCA ATCCCTATTGGCGG TGGCAGCGCCAATGT TERM 6427 4953529 - 4953551 + G 70 -7 -4.0492 | opp_overlap 4953507, overlap 4953531 TGGTACCGCAATCCC TATTGGCGGT GGC AGCGCCAATG TTTATGTAAACCTTG fimH 4953431 - 4954333 + | protein FimH TERM 6428 4954539 - 4954570 + T 93 -11.6 -4.19746 | gap 1, overlap 4954542 4954543 TTTAGACTTTGTCAT CAGTCAGAGCCTGCC ATT GGCAGGCTCCGG-TG TTCTTTTACGCTACC TERM 6429 4954542 - 4954568 + T 100 -14.4 -3.69506 | overlap 4954539 4954543 AGACTTTGTCATCAG TCAGAGCCTGCC ATT GGCAGGCTCCGG TGTTCTTTTACGCTA TERM 6430 4954543 - 4954567 + T 93 -15.7 -2.80981 | overlap 4954542 4954539 GACTTTGTCATCAGT CAGAGCCTGCC ATT GGCAGGCTCCG GTGTTCTTTTACGCT gntP 4955919 - 4954576 - | high-affinity gluconate transporter GntP TERM 6431 4957318 - 4957288 - g 70 -6.9 -4.0098 | gap 1 GCGGAAGGCAAAGAA GACC-TGATCCCGA TGCG TCCGGACCACGGTC ATCAGATGCTGGACG uxuA 4956259 - 4957443 + | mannonate dehydratase TERM 6432 4957450 - 4957474 + F 100 -15 -3.58329 | opp_overlap 4957446, overlap 4957446 AGCCGTTAATATCCA CCGGCATGGC TGCGC GCCGTGCCGG TTCCTTCTTCCTTGC TERM 6433 4957757 - 4957746 - g 86 -5.8 -5.15117 | GAAAACCTGAAAAAA CAGC AACT GCTG TACACCGTGGCGGAA TERM 6434 4957790 - 4957776 - g 70 -4.9 -4.56775 | ACCGTGGCGGAAAAA GGCGC AGAAA GCACC GAGCTGAAAATTATC uxuB 4957524 - 4958984 + | fructuronate reductase TERM 6435 4959009 - 4959040 + F 100 -12.5 -4.94243 | TACCCTACAGACTTA CTGGTCAATCAAA CTGATA TTTGGTTGACCAG TTTTCGTTTTTTTGC EcSMS35_4851 4959307 - 4960080 + | GntR family transcriptional regulator TERM 6436 4960118 - 4960094 - T 71 -8.6 -3.44527 | opp_overlap 4960094 4960102 4960107 4960109 4960110, overlap 4960107 4960108 GACTTATTATGATAA GCGCAAGG GTAAACGTT CCTTGCGC TTTCTTAAATTAAGA TERM 6437 4960094 - 4960118 + T 82 -9.3 -4.2528 | opp_overlap 4960094 4960107 4960108, overlap 4960102 4960107 4960109 4960110 GACTTATTATGATAA GCGCAAGGG TAAACGT TCCTTGCGC TTTCTTAAATTAAGA TERM 6438 4960109 - 4960145 + T 76 -10.3 -3.38317 | opp_overlap 4960094 4960108 4960107, overlap 4960094 4960107 4960102 4960110 GCGCAAGGGTAAACG TTCCTTGCGCTTTCTTA AAT TAAGAAATCGCAATGAG TATTACTTTGTAAAT TERM 6439 4960110 - 4960144 + T 77 -11.6 -2.62267 | opp_overlap 4960094 4960108 4960107, overlap 4960094 4960109 4960107 4960102 CGCAAGGGTAAACGT TCCTTGCGCTTTCTTA AAT TAAGAAATCGCAATGA GTATTACTTTGTAAA EcSMS35_4852 4961051 - 4960221 - | hypothetical protein TERM 6440 4961332 - 4961346 + H 70 -5.8 -4.40333 | GTATTTTTGATGTAT TTGATA TGT TATCAA TTTATATTATTTACA EcSMS35_4853 4961384 - 4961527 + | hypothetical protein EcSMS35_4854 4961623 - 4961757 + | hypothetical protein EcSMS35_4855 4961723 - 4962106 + | GPW/gp25 family protein TERM 6441 4962142 - 4962118 - T 89 -12.2 -3.65353 | opp_overlap 4962118, overlap 4962111 GTAAATGACGGGAAA CGCGATACGC GCAAG ACGTATCGCG TTAGGTCACAATTAG TERM 6442 4962118 - 4962142 + T 79 -11.5 -3.06831 | opp_overlap 4962111 4962118 GTAAATGACGGGAAA CGCGATACG CGCAAGA CGTATCGCG TTAGGTCACAATTAG ptnE 4964535 - 4962154 - | phosphoenolpyruvate-protein phosphotransferase PtnE ptnK 4965171 - 4964539 - | dihydroxyacetone kinase, subunit PtnK ptnC 4966248 - 4965184 - | dihydroxyacetone kinase, subunit PtnC TERM 6443 4966445 - 4966462 + H 77 -4.9 -5.00616 | overlap 4966447 AAAAGTGTTTTTTAT TATCATC TGCA GATGATG TTTTTTACAGCGCGA TERM 6444 4967145 - 4967135 - g 72 -6.8 -4.2558 | CAGGCGTCAGGAAAA GCCA CAA TGGC AGGTGGGGCGTCGAC cglD 4966574 - 4967656 + | glycerol dehydrogenase CglD TERM 6445 4967689 - 4967665 - f 83 -7.1 -4.80853 | opp_overlap 4967667, overlap 4967667 ACTTTAAAAAAATAA TACGGCCTG TGCAAAG CAGGCCGTT GGTGTCATTTTAAAT TERM 6446 4967667 - 4967687 + F 76 -10.4 -3.37531 | opp_overlap 4967667 4967665 TTTAAAAAAATAATA CGGCCTGT GCAAA GCAGGCCG TTGGTGTCATTTTAA TERM 6447 4967687 - 4967667 - f 81 -9.7 -4.0057 | opp_overlap 4967667, overlap 4967665 TTTAAAAAAATAATA CGGCCTG TGCAAAG CAGGCCG TTGGTGTCATTTTAA TERM 6448 4968549 - 4968568 + G 95 -10 -4.61566 | gap 1 GGACAACTGGCCGAC CGCTGTGCG TCA CGCAC-GCG TTTTATGATTTACGC cglT 4967724 - 4968992 + | major facilitator family protein CglT cglE 4969010 - 4970374 + | dihydrolipoamide dehydrogenase CglE TERM 6449 4970413 - 4970378 - f 100 -21.4 -3.78934 | gap 1, overlap 4970381 4970398 CGTCTGGCATAACAA CAAGGCGCAGAGA-GCT GAA AGCCTCTCTGCGCCTTG CAGGAGAAAGACCAT TERM 6450 4970410 - 4970381 - f 100 -17.3 -4.02817 | gap 1, overlap 4970378 4970398 CTGGCATAACAACAA GGCGCAGAGA-GCT GAA AGCCTCTCTGCGCC TTGCAGGAGAAAGAC EcSMS35_4862 4970675 - 4972216 + | putative carnitine transporter CglC TERM 6451 4972255 - 4972230 - T 74 -10.5 -3.16039 | opp_overlap 4972230 AATGATGTTCAGGAA TGCCCGGTAAT TTGC ATTATCGGGCA TTTTACCGAACGGGA TERM 6452 4972230 - 4972255 + T 100 -12.7 -4.07568 | opp_overlap 4972230 AATGATGTTCAGGAA TGCCCGGTAAT TTGC ATTATCGGGCA TTTTACCGAACGGGA gcxK 4973414 - 4972272 - | glycerate kinase GcxK TERM 6453 4973456 - 4973488 + r 93 -12.1 -3.9281 | opp_overlap 4973464, overlap 4973464 GGGCAGGGCAACGAG TGAACGAAGGGAACC GGT GGTTCCCTTAATTCA TTATTTACGGATAGT TERM 6454 4973480 - 4973464 - R 90 -12.3 -3.3903 | opp_overlap 4973456 4973464 CAACGAGTGAACGAA GGGAACC GGT GGTTCCC TTAATTCATTATTTA TERM 6455 4973464 - 4973480 + r 93 -12.3 -3.51858 | opp_overlap 4973464, overlap 4973456 CAACGAGTGAACGAA GGGAACC GGT GGTTCCC TTAATTCATTATTTA gcxR 4974376 - 4973489 - | 2-hydroxy-3-oxopropionate reductase GcxR gcxI 4975176 - 4974394 - | hydroxypyruvate isomerase Gcxl gcxC 4976928 - 4975189 - | glyoxylate carboligase GcxC EcSMS35_4867 4977307 - 4979256 + | putative regulatory protein IbeR TERM 6456 4979440 - 4979412 - f 86 -2.4 -5.72254 | opp_overlap 4979416 4979422, overlap 4979416 4979420 4979422 TGAAATAATAAAAAA CAGGCAAAGAGA GATGA TCTCCTTGTATG TCTGTATTAGCATGA TERM 6457 4979502 - 4979485 - f 87 -11.3 -3.63435 | opp_overlap 4979481, overlap 4979481 AATTAAAAATATCAA CGCGCTT ATAT AAGCGCG GGGGATTGTTTTACT ibeA 4979543 - 4980913 + | invasion protein IbeA TERM 6458 4981242 - 4981263 + G 82 -3 -5.24129 | gap 1 GTTACTGGTTGCGCC CGC-ATGGC TTTAT GCTATAGCG TTTTTTCTGAACGCA TERM 6459 4981997 - 4981985 - g 100 -4.7 -5.67711 | opp_overlap 4981985 4981983 CAAACAAAATAAAAA GTGCC TTT GGCGC TATTCTGGCAAGCGG ibeT 4980928 - 4982331 + | Na+/H+ antiporter IbeT TERM 6460 4982356 - 4982383 + T 93 -13.5 -3.26947 | overlap 4982357 GATAATAAATGCGTT TGCCGGATGGA TTAATC TCCATCCGGCG TTAATGTCAAAATTC TERM 6461 4982357 - 4982382 + T 89 -14.8 -2.55847 | overlap 4982356 ATAATAAATGCGTTT GCCGGATGGA TTAATC TCCATCCGGC GTTAATGTCAAAATT EcSMS35_4870 4983329 - 4982418 - | LysR family transcriptional regulator iadA 4984566 - 4983394 - | beta-aspartyl peptidase TERM 6462 4984400 - 4984379 - G 75 -5.1 -4.71426 | gap 1, overlap 4984380 4984381 TGTTGATCAATAAAA CCTGGGCAGA GGA TCTGCCC-GC TGAGATCGACAACCG EcSMS35_4872 4985040 - 4984579 - | hypothetical protein TERM 6463 4984992 - 4985017 + g 70 -4.7 -4.57569 | opp_overlap 4984981 4984985 4984982 TAAAGCCACGGCGCG CGCCATCGATA AACA TATCCATGACG TTTTTGCGGACCTGA EcSMS35_4873 4985720 - 4985037 - | putative transporter TERM 6464 4985723 - 4985734 + H 93 -3 -5.90231 | opp_overlap 4985723 CTTGTTGTGTCATAA CAAT CCCC ATTG TTTTTTTGTGTTTGT EcSMS35_4874 4985750 - 4985905 + | hypothetical protein kptA 4985970 - 4986554 + | RNA 2'-phosphotransferase TERM 6465 4986634 - 4986657 + T 78 -11.1 -3.17212 | opp_overlap 4986634 GTTATCAGTCGGAAA GGATACCCT CGCACA AGGGTATCC TTAATAACCTGCTGA TERM 6466 4986657 - 4986634 - T 89 -11.8 -3.58343 | opp_overlap 4986634 GTTATCAGTCGGAAA GGATACCCTC GCAC AAGGGTATCC TTAATAACCTGCTGA EcSMS35_4876 4991915 - 4986675 - | putative invasin TERM 6467 4990998 - 4990982 - G 73 -11.5 -2.71712 | opp_overlap 4990982, overlap 4990981 CTTCCGCGCGTAAAT CCCAGCC GTT GGCCGGG CGGGCTTCGTAGTCA TERM 6468 4991161 - 4991148 - G 76 -3.8 -5.00616 | GTCGTGGTCAAAAAA CAGG TTGATG CCTG ACATCCAGCTGGGGG EcSMS35_4877 4993304 - 4992126 - | major facilitator transporter EcSMS35_4878 4994361 - 4993372 - | SdiA-regulated protein TERM 6469 4994338 - 4994322 - G 88 -10.8 -4.02719 | opp_overlap 4994321 4994318 4994322 CGATGAAATAGTAAA CGCCGC AGGGG GCGGCG GTTGTCTCTGGATGG TERM 6470 4994322 - 4994338 + g 70 -10.8 -2.75993 | opp_overlap 4994322, overlap 4994321 4994318 CGATGAAATAGTAAA CGCCGC AGGGG GCGGCG GTTGTCTCTGGATGG TERM 6471 4994417 - 4994387 - R 72 -10.5 -2.954 | overlap 4994386 CATCGACTGATAAAT GCGCCTCATCCAT GAATG ATAGATGAGGCGG TTAACAATTTATATC EcSMS35_4879 4996442 - 4994469 - | pentapeptide repeat-containing protein TERM 6472 4994890 - 4994904 + g 74 -2.9 -5.00895 | opp_overlap 4994890, overlap 4994884 CTAATATTAGTAAGA TCTTT GTCTG AAAGA TTTTTCTCTGATAGA TERM 6473 4994977 - 4994966 - G 79 -4.4 -4.9138 | ATGACGGAAAGAAAA TCAC TTTT GTGA AATCTATGTGTTCAA TERM 6474 4995852 - 4995867 + g 70 -4.8 -4.57837 | GGCATCTAATTTCAC TTCAAA TGAA TTTGAA TTTTTGCAGGCATGT TERM 6475 4996287 - 4996313 + g 74 -2.4 -5.06585 | opp_overlap 4996291, overlap 4996282 4996291 4996295 AATCAAACCGTCATT CAAATGATTTAT ATC ATAATTAATTTG TTTTTGTATGGTTTC TERM 6476 4996502 - 4996534 + r 82 -12.3 -2.70932 | opp_overlap 4996506 4996511, overlap 4996506 ATCAGGGGGTGTGGG TAAAGATAAGCTTCA CAC TGAAACTTATCTTTA TCATTACCACACCCG TERM 6477 4996530 - 4996506 - R 81 -10.9 -3.53012 | opp_overlap 4996502 4996506, overlap 4996511 GGGGGTGTGGGTAAA GATAAGCTTCA CAC TGAAACTTATC TTTATCATTACCACA TERM 6478 4996506 - 4996530 + r 78 -8.7 -4.05446 | opp_overlap 4996506 4996511, overlap 4996502 GGGGGTGTGGGTAAA GATAAGCTTCA CAC TGAAACTTATC TTTATCATTACCACA EcSMS35_4880 4997030 - 4996764 - | hypothetical protein TERM 6479 4996964 - 4996981 + g 74 -7.7 -4.03234 | AAGTCATGCCCGCTG CCTGCAA CGCC TTGCGGG TTTGTATGACGCCGA hgdC 4997794 - 4997027 - | (R)-2-hydroxyglutaryl-CoA dehydratase activator TERM 6480 4997732 - 4997715 - G 84 -10.5 -3.84246 | GTTGGAACGAGGAAA CGGCGCG TAAT CACGCCG TCTGCCAGTAAGATC EcSMS35_4882 4998955 - 4997804 - | putative 2-hydroxyglutaryl-CoA dehydratase, D-component TERM 6481 4998420 - 4998434 + g 72 -5.6 -4.57073 | overlap 4998421 TAAAAATTAGCCAGT GCGCGA CGT TCGCGG TTTTTCAGCGCAATG TERM 6482 4998604 - 4998615 + g 82 -3 -5.27023 | GCTTAAACTCTGCCA TGTA TTCA TACA TTTTCTTTTTGCCGT EcSMS35_4883 5000350 - 4999070 - | hypothetical protein TERM 6483 5000325 - 5000308 - G 80 -11.3 -3.32233 | opp_overlap 5000306, overlap 5000306 5000304 TAAGCAGTAAAGAGA GCGCCAA CATT TTGGCGC GTCTGAGTTCAATGA mdtM 5001623 - 5000391 - | multidrug resistance protein MdtM TERM 6484 5001379 - 5001365 - G 81 -7.2 -4.67234 | AGGCAAGGGTAAAAA TTAACG CCC CGTTAA TCAGCACCGGCCTGC TERM 6485 5001762 - 5001741 - H 75 -10.9 -2.97166 | overlap 5001736 ATGTAATCAACCACA CTGCCTGTG AACA CACAGACAG AGAAATACCTTCTGA TERM 6486 5001794 - 5001768 - H 76 -8.1 -4.20086 | opp_overlap 5001772 ACACAGACAGAGAAA TACCTTCTGAC TCCAG GTCAGAATGTA TAACGATTACAAATA EcSMS35_4885 5002090 - 5003046 + | hypothetical protein EcSMS35_4886 5004701 - 5003289 - | GntR family transcriptional regulator EcSMS35_4887 5004878 - 5005042 + | hypothetical protein TERM 6487 5005953 - 5005938 - g 77 -6 -4.62336 | ATCTGACGGTAAAAA CGGGGG AGAT CCCTCG TACAGATGAAGTCTA EcSMS35_4888 5005139 - 5007232 + | hypothetical protein TERM 6488 5007272 - 5007245 - T 89 -12 -3.65201 | opp_overlap 5007244, overlap 5007247 TAACACGGCGAATAA TACCCGGTAGCA CTGG CGCTACCGGGTC AATGTATCAGGCGAC TERM 6489 5007270 - 5007247 - T 100 -14.6 -3.40052 | opp_overlap 5007244, overlap 5007245 ACACGGCGAATAATA CCCGGTAGCA CTGG CGCTACCGGG TCAATGTATCAGGCG EcSMS35_4889 5007677 - 5007279 - | HSP20-like domain-containing protein TERM 6490 5007828 - 5007801 - R 73 -9.2 -3.42621 | gap 1, opp_overlap 5007790 5007802, overlap 5007802 AACGTTAATTCACAA TGGCCGGATAACA AAG TGT-ATCCGGCCT TCATAATTAATTTAA TERM 6491 5007802 - 5007827 + r 90 -12.7 -3.31625 | gap 1, opp_overlap 5007801 5007802, overlap 5007790 ACGTTAATTCACAAT GGCCGGATAACA AAG TGT-ATCCGGCC TTCATAATTAATTTA TERM 6492 5007827 - 5007802 - R 81 -12.7 -2.65091 | gap 1, opp_overlap 5007802 5007790, overlap 5007801 ACGTTAATTCACAAT GGCCGGATAACA AAG TGT-ATCCGGCC TTCATAATTAATTTA TERM 6493 5008215 - 5008262 + r 88 -10.7 -4.2687 | opp_overlap 5008220 5008227, overlap 5008216 5008227 5008258 ACTAATATCTTAGAT ATACATTCATAACGCCCGGTA CAGCGT TACCGGGCGTTATGGAGATAA TTTATCATTTTTACA TERM 6494 5008216 - 5008261 + r 95 -14.2 -3.15037 | opp_overlap 5008220 5008227, overlap 5008215 5008227 5008258 CTAATATCTTAGATA TACATTCATAACGCCCGGTA CAGCGT TACCGGGCGTTATGGAGATA ATTTATCATTTTTAC TERM 6495 5008257 - 5008220 - R 100 -17.2 -3.05498 | opp_overlap 5008216 5008215 5008227, overlap 5008227 TATCTTAGATATACA TTCATAACGCCCGGTA CAGCGT TACCGGGCGTTATGGA GATAATTTATCATTT TERM 6496 5008250 - 5008227 - R 100 -13.9 -3.41839 | opp_overlap 5008227 5008216 5008215, overlap 5008220 GATATACATTCATAA CGCCCGGTA CAGCGT TACCGGGCG TTATGGAGATAATTT TERM 6497 5008227 - 5008250 + r 100 -13.9 -3.32536 | opp_overlap 5008220 5008227, overlap 5008216 5008215 GATATACATTCATAA CGCCCGGTA CAGCGT TACCGGGCG TTATGGAGATAATTT EcSMS35_4891 5010123 - 5008273 - | hypothetical protein TERM 6498 5008509 - 5008525 + g 93 -8.7 -4.96848 | CAGAAATACGCTCTT GTTCTGG CGT CCAGGAC TTTTTATCTGCAGAG TERM 6499 5009760 - 5009787 + g 93 -4.2 -5.49729 | gap 1, overlap 5009763 5009765 GATTGCCATTGTAAC GATCATCCTGTTG GCA CAATAGGG-GGTC TTTTTTTAACTGGTT EcSMS35_4892 5011410 - 5010454 - | CobW/P47K family protein EcSMS35_4893 5011624 - 5011421 - | hypothetical protein TERM 6500 5011664 - 5011647 - R 100 -14.1 -4.51812 | TCTGATAAGAACAAA GCCCCGC CGAA GCGGGGC TAAACACGGTTAGTG EcSMS35_4894 5013788 - 5011674 - | carbon starvation family protein TERM 6501 5014060 - 5014088 + r 83 -11 -3.61517 | opp_overlap 5014060 5014061, overlap 5014061 AGATCACAATAAAAA TGCCCCTTCGAT AATTA ACCGAAGGGGCG TTCTTAGAAGAGAGT TERM 6502 5014088 - 5014060 - R 100 -11 -5.2291 | opp_overlap 5014060 5014061, overlap 5014061 AGATCACAATAAAAA TGCCCCTTCGAT AATTA ACCGAAGGGGCG TTCTTAGAAGAGAGT TERM 6503 5014061 - 5014087 + r 82 -12.3 -2.76696 | opp_overlap 5014060 5014061, overlap 5014060 GATCACAATAAAAAT GCCCCTTCGAT AATTA ACCGAAGGGGC GTTCTTAGAAGAGAG TERM 6504 5014087 - 5014061 - R 100 -14.5 -3.72119 | opp_overlap 5014061 5014060, overlap 5014060 GATCACAATAAAAAT GCCCCTTCGAT AATTA ACCGAAGGGGC GTTCTTAGAAGAGAG EcSMS35_4895 5015312 - 5014092 - | putative D-serine ammonia-lyase EcSMS35_4896 5015513 - 5016955 + | N-acyl-D-amino-acid deacylase family protein EcSMS35_4897 5016965 - 5017354 + | putative endoribonuclease L-PSP TERM 6505 5017409 - 5017390 - f 74 -10.8 -2.54702 | ACAGACCGCAATTGA GTGCTGAA TACA TTCAGCAC TCCGGGAACTCTTAC EcSMS35_4898 5017457 - 5018926 + | solute/sodium symporter (SSS) family protein TERM 6506 5018962 - 5018935 - T 74 -10.6 -2.66979 | overlap 5018934 AGCATAACCGACAAT GCTAATCGCCAA GTGG CTGGCGGTTAGC GCCCCCACGGTGGCT EcSMS35_4899 5019799 - 5018936 - | RpiR family transcriptional regulator TERM 6507 5018999 - 5019022 + g 100 -12.4 -4.46233 | overlap 5018997 5019000 CACGAGTTTTATCCG CCGCAGGCGA TCTT TCGCCTGCGC TTTATTTGCCATTGC TERM 6508 5019000 - 5019021 + g 100 -15.9 -3.27017 | overlap 5018997 5018999 ACGAGTTTTATCCGC CGCAGGCGA TCTT TCGCCTGCG CTTTATTTGCCATTG TERM 6509 5020006 - 5020020 + G 72 -7.1 -4.20883 | GTATCAAGATCGTGA CCAGC TTACT GCTGG TTTTGGCCGTTTTTG TERM 6510 5020331 - 5020292 - g 91 -5.6 -5.42862 | gap 1, opp_overlap 5020326, overlap 5020308 5020309 ACAGGCGGAAAAAAA CTG-GGCGGATTACGAAGC GTT GCCGCGTGACCCGCGTCAG AGCACCGCCGCAGCG TERM 6511 5020950 - 5020970 + G 70 -9.7 -3.14963 | AACGCCGAAAATGCG CGCCAGG CCAGCCA CCTGGCG TTAAGTGCTTCTGAA TERM 6512 5021080 - 5021062 - g 70 -5.2 -4.37886 | opp_overlap 5021063, overlap 5021063 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATTGACGGCATTGC tsr 5019981 - 5021645 + | methyl-accepting chemotaxis protein I TERM 6513 5021685 - 5021658 - T 100 -12.2 -4.8543 | gap 1 TAATCGCCATAAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAGGGAGATTAATCT EcSMS35_4901 5023055 - 5021694 - | major facilitator transporter EcSMS35_4902 5024184 - 5023270 - | GntR family transcriptional regulator TERM 6514 5023911 - 5023921 + g 70 -4 -4.69656 | TGAAAAAAGCCTGCT CAAA CAC TTTG TTTTGTTCACTCATT EcSMS35_4903 5024323 - 5025345 + | zinc-binding dehydrogenase family oxidoreductase TERM 6515 5025373 - 5025399 + T 100 -5.8 -6.32017 | opp_overlap 5025364 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTTGTTTCTT mdoB 5027774 - 5025483 - | phosphoglycerol transferase I TERM 6516 5026770 - 5026756 - G 72 -5.7 -4.54047 | GTACGCGAGATAAAA CCATC CGGGT GATGG GTATCGACTGTCAGG EcSMS35_4905 5028525 - 5028028 - | hypothetical protein dnaC 5029308 - 5028571 - | DNA replication protein DnaC TERM 6517 5029186 - 5029200 + g 93 -11.4 -4.15703 | ACGTTCGAGAGCGGC GGAGCG GAT CGCTCC TTGTTCTTTCTGCCA dnaT 5029850 - 5029311 - | primosomal protein 1 TERM 6518 5029407 - 5029421 + g 77 -2.7 -5.07486 | GGCACGGCCGATTTG CAGGC TGCGC GCCAG TTTTTGTTGCCACTG TERM 6519 5029940 - 5029905 - R 91 -13.4 -3.26947 | opp_overlap 5029907 5029909 5029939 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTAAGCGAGGCAAT TERM 6520 5029907 - 5029938 + r 74 -10.9 -2.70932 | opp_overlap 5029905, overlap 5029909 ACTTTTATAGTAACA CACGGAGGAGAGG AGGCTG TCTCTCATCCGTG TGCTTAAGCGAGGCA EcSMS35_4908 5030424 - 5029957 - | hypothetical protein EcSMS35_4909 5031245 - 5030421 - | hypothetical protein TERM 6521 5031151 - 5031141 - G 70 -5.4 -4.43397 | TTGCAAAAGAAATAA TCCA CAC TGGA TACAAAGCCGTGTTA TERM 6522 5031170 - 5031158 - G 81 -9.1 -4.05747 | opp_overlap 5031155 CACACTGGATACAAA GCCGT GTT ACGGC TCGCTGTTGCTCAGT EcSMS35_4910 5031269 - 5031403 + | hypothetical protein TERM 6523 5032396 - 5032378 - gf 86 -3.9 -5.41143 | gap 1 CAGCGCCCAAAAAAA CAGTGCGA TGCG TCG-ACTG GCAATTCACAGCAAC EcSMS35_4911 5031809 - 5032534 + | LuxR family transcriptional regulator EcSMS35_4912 5032492 - 5033169 + | LuxR family transcriptional regulator fhuF 5033996 - 5033208 - | ferric iron reductase protein FhuF TERM 6524 5033526 - 5033546 + g 73 -11.9 -2.80922 | overlap 5033524 5033522 5033528 GCTGATTAACGTTTC CATTCGCTG CTG CGGCGAATG TGGTGTTGCGTTTTT EcSMS35_4914 5034098 - 5034373 + | hypothetical protein rsmC 5036066 - 5035035 - | ribosomal RNA small subunit methyltransferase C TERM 6525 5036411 - 5036395 - gH 79 -2.2 -5.26316 | overlap 5036396 TGACGCCAGAAAAAA TCGCGA TGCTG CCGCAA GGCAGTCGCTGCAAC holD 5036169 - 5036582 + | DNA polymerase III, psi subunit TERM 6526 5036849 - 5036833 - gf 70 -3.5 -4.67904 | overlap 5036834 GACGAACTGGAAAAA CGCGGCG TGG CGACGCT ATGGCTGGAAGTCCG rimI 5036551 - 5036997 + | ribosomal-protein-alanine acetyltransferase yjjG 5037012 - 5037689 + | 5-nucleotidase YjjG TERM 6527 5037745 - 5037759 + F 70 -9.2 -3.14132 | opp_overlap 5037743 5037744 TCGTTTTCAACAAGC GCGGCG CGA TGCCGC TTACTCAAGAAGAAA TERM 6528 5037798 - 5037831 + G 77 -8.9 -4.06419 | gap 1, opp_overlap 5037806, overlap 5037806 ACGTTGTCTCCTTAT TTGCAAGAG-GTGGCG AAG CGCCGCACTTTTGCCA TTATTTCTCACCCGG TERM 6529 5038708 - 5038687 - g 70 -5.9 -4.18018 | gap 1 GCTTCGTATTTAAAA TTCAGG-CCA ACA TGGACCCGAA ACACCGCGACCGCGT prfC 5037780 - 5039369 + | peptide chain release factor 3 TERM 6530 5039380 - 5039405 + F 89 -14.7 -2.8088 | overlap 5039378 5039377 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTTCCTTCCT osmY 5039762 - 5040367 + | osmotically inducible protein Y EcSMS35_4924 5040494 - 5040655 + | hypothetical protein TERM 6531 5040705 - 5040687 - f 100 -14.6 -3.67989 | opp_overlap 5040687 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6532 5040687 - 5040705 + F 100 -14.6 -4.28049 | opp_overlap 5040687 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6533 5041144 - 5041154 + G 74 -8.2 -3.90744 | opp_overlap 5041142 CGTTGCAAATGGATA CCGC CGC GCGG TTGTTTGACAGCGGC EcSMS35_4925 5040777 - 5041850 + | patatin family phospholipase EcSMS35_4926 5041847 - 5042629 + | TatD family hydrolase EcSMS35_4927 5043522 - 5042659 - | radical SAM domain-containing protein TERM 6534 5043469 - 5043445 - GT 76 -6.4 -4.57569 | gap 1, overlap 5043447 GCAGCCCTGCAAAAA CAGAGCCAGAC GACT GCCTGGCCC-G TCAACGCAGGAGAAG TERM 6535 5043468 - 5043447 - GT 82 -10.1 -3.90316 | overlap 5043445 AGCCCTGCAAAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA EcSMS35_4928 5045044 - 5043494 - | hypothetical protein EcSMS35_4929 5045020 - 5045145 + | hypothetical protein TERM 6536 5045911 - 5045891 - g 88 -5.3 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCGGCGG GCGGCGTGCGTACTG deoC 5045302 - 5046081 + | deoxyribose-phosphate aldolase deoA 5046159 - 5047481 + | thymidine phosphorylase deoB 5047533 - 5048756 + | phosphopentomutase TERM 6537 5048765 - 5048784 + F 90 -10.7 -4.38927 | GTTCTGATGGATTTG GGCGGAG CGTTGA CTCCGCC TTTGTTATGTCACAA deoD 5048813 - 5049532 + | purine nucleoside phosphorylase TERM 6538 5049566 - 5049589 + T 100 -16 -4.87037 | CGATTGCCTTGTGAA GCCGGAGCGG GAGA CTGCTCCGGC TTTTTAGTATCTATT EcSMS35_4934 5049956 - 5049693 - | hypothetical protein lplA 5051004 - 5049988 - | lipoate-protein ligase A TERM 6539 5050610 - 5050622 + g 70 -6.9 -4.07687 | overlap 5050611 CCTGAGACTTTGCGG TCGCC TTC GGCGG TTTTCACCACCAGAT EcSMS35_4936 5051676 - 5051032 - | protein smp precursor TERM 6540 5051374 - 5051388 + g 79 -10 -3.75024 | opp_overlap 5051373 5051372 GCTTTCGCCAGAACG GGCGAT AAG ATCGCC TTGTTCGTCATACAC TERM 6541 5052692 - 5052677 - g 87 -4.6 -5.29385 | opp_overlap 5052683 5052684, overlap 5052686 AAGTGAATGAAAAAA CGGAAG TCAC CATCCG TCACGCTGACCTGAT serB 5051782 - 5052750 + | phosphoserine phosphatase TERM 6542 5053588 - 5053575 - g 80 -5.2 -4.88067 | ACGCAGCCATAAAAA CCGC TTCGGC GCGG TGAATGAGCTGGGCG radA 5052799 - 5054181 + | DNA repair protein RadA TERM 6543 5055104 - 5055119 + G 70 -6.1 -4.15222 | opp_overlap 5055104 5055102 5055105 TTTTGCAGTGAAATA CGCCA ATAAAG TGGCG TTTATTGACACCGAT nadR 5054202 - 5055434 + | nicotinamide-nucleotide adenylyltransferase TERM 6544 5055507 - 5055493 - g 70 -6.4 -4.15565 | TTGATGAGTTGAAAA CCTCTC TGG AAGAGG CTGTCGAGATTAAAC TERM 6545 5055558 - 5055537 - g 77 -2.9 -5.03145 | gap 1, overlap 5055525 5055539 CAAGGTTTGAAAAAA CCTGCACGGG TGA CCCGC-CACG AAATTGAGGATGCTA EcSMS35_4940 5055468 - 5055635 + | hypothetical protein EcSMS35_4941 5057409 - 5055742 - | ABC transporter, ATP-binding protein TERM 6546 5057454 - 5057467 + GH 71 -2.3 -4.96646 | opp_overlap 5057454 TGATGAGTTTTCAAA GGCGA AGTG TAGCC TTTTTCCTTATCTAA EcSMS35_4942 5057383 - 5057511 + | hypothetical protein TERM 6547 5058535 - 5058520 - g 73 -9 -3.67517 | opp_overlap 5058520 GACGAACAGGCGAAA TGGCGT GATG ACGCCA TTATGCGTTCGCAAT TERM 6548 5058520 - 5058535 + G 71 -9 -3.42056 | opp_overlap 5058520 GACGAACAGGCGAAA TGGCGT GATG ACGCCA TTATGCGTTCGCAAT slt 5057620 - 5059557 + | soluble lytic murein transglycosylase TERM 6549 5059689 - 5059708 + G 72 -6.4 -4.3898 | opp_overlap 5059689 5059688 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 5059647 - 5059973 + | trp operon repressor EcSMS35_4944 5060491 - 5059967 - | hypothetical protein TERM 6550 5060191 - 5060207 + g 70 -5.8 -4.18018 | gap 1, opp_overlap 5060178 TAGCCGAACGCGCCT CGCC-GC GCTG GCTGGCG TTTTCAATCACCACC TERM 6551 5060316 - 5060331 + g 72 -8.2 -3.76224 | TTTGCTACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA EcSMS35_4947 5060534 - 5061181 + | phosphoglycerate mutase family protein rob 5062047 - 5061178 - | right origin-binding protein TERM 6552 5062704 - 5062692 - g 74 -6.2 -4.56775 | opp_overlap 5062691 5062692 AGGTTCGCCGAAAAA CGCG ATTAG CGCG GTTCCTGTCATGCCG EcSMS35_4948 5062258 - 5062731 + | creA protein creB 5062744 - 5063433 + | transcriptional regulatory protein CreB creC 5063433 - 5064857 + | sensor protein CreC TERM 6553 5065589 - 5065603 + G 77 -2.8 -5.13521 | opp_overlap 5065589 GACCTTAACCAGCAA CTGG CCGCATC CCAG TTTTTTAGGTGATTT TERM 6554 5065726 - 5065744 + G 70 -11 -2.75963 | overlap 5065725 CAGGCAATGATACCG GCTGGGAA AAC TTCCCGGC GTTTAGCGTCGCAGT EcSMS35_4951 5064915 - 5066267 + | inner membrane protein CreD TERM 6555 5066307 - 5066278 - T 100 -13.7 -4.64144 | opp_overlap 5066284, overlap 5066284 AATAAGGTTGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTT TGACGGTGGTAAAGC TERM 6556 5066284 - 5066301 + T 100 -12.7 -5.42259 | opp_overlap 5066278 5066284 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTGACGGTGG TERM 6557 5066301 - 5066284 - T 100 -12.7 -5.61881 | opp_overlap 5066284, overlap 5066278 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTGACGGTGG arcA 5067042 - 5066326 - | aerobic respiration control protein ArcA EcSMS35_4953 5067678 - 5068364 + | RNA methyltransferase