TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.480981 %AT, 4538886 nt, 38244 terms. Intergenic: 0.561672 %AT, H2T: 670605 nt, 4994 terms; T2T: 170212 nt, 3494 terms; H2H: 221363 nt, 2987 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|218692794|ref|NC_011749.1| Escherichia coli UMN026 plasmid p1ESCUM, complete sequence (length 122301) TERM 1 616 - 629 + G 70 -3.7 -4.64766 | TATTGTTCAGTTACA GGCTG ATCC CCGCC TTTTTGAACTGTACC RepFIB 101 - 1078 + | replication protein TERM 2 1082 - 1126 + T 100 -18.9 -3.03124 | opp_overlap 1082 1086, overlap 1086 AAATCCCGCTGAACA TAAACTGTAGTCAGATAAGAG AGA CTCTTTACTGACTACAGTTTA TATTAACAGGTGCAG TERM 3 1126 - 1082 - T 100 -18.9 -3.0264 | opp_overlap 1082 1086, overlap 1086 AAATCCCGCTGAACA TAAACTGTAGTCAGATAAGAG AGA CTCTTTACTGACTACAGTTTA TATTAACAGGTGCAG TERM 4 1086 - 1122 + T 100 -15.3 -4.19177 | opp_overlap 1082 1086, overlap 1082 CCCGCTGAACATAAA CTGTAGTCAGATAAGAG AGA CTCTTTACTGACTACAG TTTATATTAACAGGT TERM 5 1122 - 1086 - T 100 -15.3 -4.1891 | opp_overlap 1086 1082, overlap 1082 CCCGCTGAACATAAA CTGTAGTCAGATAAGAG AGA CTCTTTACTGACTACAG TTTATATTAACAGGT int 2061 - 1321 - | putative site-specific recombinase TERM 6 1733 - 1755 + g 90 -9 -4.56775 | overlap 1735 ACTTCATCTTTTGGC GGGCGTCCGC GTC GCGCACGCAC TTTTTCGGACAGGAT TERM 7 2420 - 2436 + H 74 -3.7 -4.92791 | opp_overlap 2412, overlap 2424 GTCACAACATAAGGT TATGCAT AAT AAGCATA TTTTATTATGTTATG TERM 8 2918 - 2929 + G 100 -3 -5.94743 | CAACTATTCTATCAT TGAT TATG ATCA TTTTTATTTTTTTTA p1ECUMN_0003 2737 - 3906 + | hypothetical protein TERM 9 4632 - 4602 - T 70 -2.6 -4.93661 | overlap 4603 ATATTAATAACAAAA CCTATCATTAAACA AAA TGATGAATGACAGA GTTTTCTTTAAAATA insC 6031 - 5621 - | IS2 insertion element repressor InsA TERM 10 6247 - 6228 - H 85 -8 -4.71426 | opp_overlap 6227 GTTGCATTAATAAAA TGATATGT TATA ACATATCA ATATTAACATATATT p1ECUMN_0005 6268 - 8238 + | putative Hemin receptor precursor p1ECUMN_0006 8245 - 9036 + | conserved hypothetical protein; putative exported protein, putative ABC-type Co2+ transport system p1ECUMN_0007 9617 - 9099 - | conserved hypothetical protein, putative transposase p1ECUMN_0008 10557 - 9775 - | putative transposase ORF2 IS100 TERM 11 10473 - 10487 + g 80 -11.4 -3.3506 | overlap 10486 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA p1ECUMN_0009 11576 - 10554 - | putative transposase ORF2 IS100 TERM 12 11527 - 11542 + g 70 -4.6 -4.56914 | overlap 11528 GCCCGGCTACTCATT CCCTGC TTGT GCAGGA TTTTAATTTCCATAA TERM 13 11598 - 11580 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG p1ECUMN_0010 12348 - 11590 - | putative fragment of transposase ORF2, ISEc8, IS66 family p1ECUMN_0011 12607 - 12350 - | putative transposase IS66 family (part 1) p1ECUMN_0012 13003 - 12656 - | putative transposase ORF2, ISEc8, IS66 family p1ECUMN_0013 13404 - 13000 - | putative transposase ORF 1, ISEc8, IS66 family TERM 14 13858 - 13825 - R 71 -8.9 -3.29471 | gap 1, opp_overlap 13827 13836, overlap 13793 TGCTGAGTAGAGTAA GAGGCAGGG-CGTAGT CGG ACTATTTCCCTGCCTC TCCTCCCCGAACCGG p1ECUMN_0015 15429 - 13906 - | putative reverse transcriptase-like protein from prophage or plasmid TERM 15 15277 - 15292 + g 72 -8.2 -3.72893 | CACGCCATCAACGCC GGGGGT ATGG GCCCCC TTTGATGAAAGCGTG TERM 16 17478 - 17451 - R 82 -7.1 -4.7153 | gap 1, overlap 17453 AAACAATCGGAAAAA TC-TGGGGTTCC GGCCT AGAACCCCATGA ACAGGCATAGCTGTG senB 18954 - 17680 - | Enterotoxin TieB protein TERM 17 18189 - 18203 + gr 77 -2.8 -5.1675 | overlap 18165 AATCTCTTCCGCCAA CGTAGA TTT TCTGTG TTTTTTCATCCATCG TERM 18 18655 - 18673 + gr 71 -3 -4.74801 | opp_overlap 18670 ACGATTTACACGATC GGTGACTG CTG CAAACACC TTTTTACTGGCATTA TERM 19 18843 - 18854 + gr 74 -3 -4.90266 | opp_overlap 18843 GTGCTTTGGATAAAG TGAA AATA TTCA TTTTTCGTTCCTGCA CjrC 21185 - 18924 - | outer membrane colicin Js receptor CjrB 22130 - 21354 - | periplasmic colicin Js sensitivity protein p1ECUMN_0022 23055 - 22138 - | conserved hypothetical protein, putative iron-regulated protein cjrA TERM 20 22454 - 22470 + g 93 -2.1 -5.72207 | overlap 22450 22455 CGCAGAGCTTCTTGT ACCACAG GTG CAGTGGA TTTTTTTCCTTTAGG p1ECUMN_0023 23605 - 23345 - | Similar to Rep protein (fragment) p1ECUMN_0024 23892 - 23602 - | Rep protein (fragment) TERM 21 24288 - 24304 + H 76 -6.5 -4.55287 | opp_overlap 24288 GTTCTGAATACCGAA CGGGTCA AAA TGACACG TTTTCTCTCCCTCAA TERM 22 24580 - 24569 - H 91 -2.2 -5.83226 | AATTCAACAAAAAAA CAGC CCCA GCTA TAAGCTTATTCTTAG p1ECUMN_0025 25237 - 25446 + | hypothetical protein; putative exported protein TERM 23 25488 - 25449 - T 93 -9.6 -4.90778 | gap 1, opp_overlap 25454 25458, overlap 25456 25458 GGTATTTAAATAAAA TATAAGACAGGCTGTCTAT CTT ACAGACAGCCTTT-TTATA ATAACAGAAAGAATA TERM 24 25482 - 25456 - T 78 -10.2 -3.63424 | opp_overlap 25454 25458, overlap 25449 25458 AAATAAAATATAAGA CAGGCTGTCTAT CTT ACAGACAGCCTT TTTATAATAACAGAA TERM 25 25458 - 25480 + T 100 -10.6 -4.91109 | opp_overlap 25456 25449 25458, overlap 25454 ATAAAATATAAGACA GGCTGTCTAT CTT ACAGACAGCC TTTTTATAATAACAG TERM 26 25480 - 25458 - T 90 -12.8 -3.35613 | opp_overlap 25454 25458, overlap 25456 25449 ATAAAATATAAGACA GGCTGTCTAT CTT ACAGACAGCC TTTTTATAATAACAG imm 25799 - 25464 - | Colicin-Ia immunity protein TERM 27 25775 - 25787 + g 70 -3.5 -4.7219 | opp_overlap 25772 ATCCCCACCACATAT TATTA AAA TAATA TTTTCTGTTCATCTG p1ECUMN_0027 25995 - 25777 - | conserved hypothetical protein; putative exported protein TERM 28 26012 - 25981 - Gg 81 -6.4 -4.81551 | opp_overlap 25984 25986, overlap 25984 GATGGACAGCAAAAA GATGTGGCGGAGCA ATTA TGCCCCTCCTCTTC TGCGTATTCTCTGGC ybaA 25928 - 26275 + | conserved hypothetical protein, putative membrane protein p1ECUMN_0029 26804 - 26295 - | hypothetical protein TERM 29 26670 - 26682 + g 70 -10.5 -2.83403 | overlap 26669 GTTTGGCCCGTAGAC CGGGG CTT CCCCG CTTTGCTCCAGCACC ydfA 27061 - 26801 - | hypothetical protein p1ECUMN_0031 27163 - 27489 + | transposase IS629 TERM 30 28712 - 28697 - g 72 -8.2 -3.72893 | CACGCTTTCATCAAA GGGGGC CCAT ACCCCC GGCGTTGATGGCGTG p1ECUMN_0033 28560 - 29063 + | conserved hypothetical protein, putative transposase TERM 31 29090 - 29077 - T 70 -6.7 -4.01315 | AAAAACCGGAAATAA CACCA GAAA TGGTG GAAAAAATAGCCTAA TERM 32 29113 - 29098 - T 74 -3.2 -5.03747 | opp_overlap 29100, overlap 29100 AAATGGTGGAAAAAA TAGCCT AAAT AGGCTG ATTCGATGTGTTTGC p1ECUMN_0034 29701 - 29102 - | hypothetical protein TERM 33 29234 - 29248 + gT 84 -3.5 -5.27335 | GTCTTTGGCTTCGGT CAGCG AACAC TGCTG TTTTTCTTTGCAGGA TERM 34 29405 - 29421 + gT 100 -4.3 -5.55664 | opp_overlap 29402 CACCGGATTAAACGT TGGGTCC ATC GTGCCCA TTTTTTTCCTGATGA p1ECUMN_0035 29846 - 29397 - | Glucose-1-phosphatase precursor (G1Pase) (fragment) TERM 35 29827 - 29807 - GR 85 -6.7 -4.81212 | overlap 29809 CGGACGACAATAAAA CAGCCCCTG CCA CAGCGGCGG CGAGTATCAATTTTT TERM 36 29825 - 29809 - GR 74 -7.9 -4.02119 | overlap 29807 GACGACAATAAAACA GCCCCTG CCA CAGCGGC GGCGAGTATCAATTT p1ECUMN_0036 30453 - 29968 - | hypothetical protein p1ECUMN_0037 31032 - 30478 - | putative thioredoxin-family protein TERM 37 30866 - 30898 + gr 86 -6.8 -5.00196 | gap 1, opp_overlap 30862 30863 TGCAGATCAAACGCC GCCAGC-GCCGGGGC CGGT GCCCCGACCGCCAGC TTTTCTTCTTTACAC p1ECUMN_0038 31645 - 30950 - | ABC transporter ATP binding protein TERM 38 31541 - 31555 + gr 77 -11.4 -2.57468 | opp_overlap 31536 31535, overlap 31540 GGCGACAAATTCACC CTGCGC AAT GCGCAG ATTAATGTCATCCAG p1ECUMN_0039 32810 - 31650 - | putative integral membrane protein, putative permease TERM 39 32526 - 32496 - GR 74 -9.6 -3.30124 | overlap 32497 32499 CGCCATGCCGTACAA CCACGGACTGGCGC CAT GCACCAGCCCCTGC GGCGCCTGATCGAGA TERM 40 32525 - 32497 - GR 84 -13.1 -2.57931 | overlap 32496 32499 GCCATGCCGTACAAC CACGGACTGGCGC CAT GCACCAGCCCCTG CGGCGCCTGATCGAG TERM 41 32609 - 32599 - GR 75 -5.4 -4.65895 | opp_overlap 32598 32599, overlap 32600 32601 GGCCCGATGTAAAAA TTCG CGC CGAA GGTGCGCAGTTCTTC p1ECUMN_0040 34053 - 32770 - | putative outer membrane protein, putative permease p1ECUMN_0041 35435 - 34056 - | putative membrane protein, putative YHS protein TERM 42 34948 - 34928 - G 78 -12.5 -2.87003 | overlap 34920 34923 34925 TCAGCAACAACAGCA GGTTGCCGC TCA GCGGCAGCC AGATCATCACCAGCA TERM 43 35537 - 35482 - R 100 -18.3 -2.62983 | opp_overlap 35483 35487 35530 35531 35532, overlap 35495 35505 GCGACGGGCATATGA TCGGTCTGACCAACGCGCCAGAAGG GGGAAT CCTCCTGGCGCGTTGGTTAGTCGGT TTTAGTTCAGACCGA TERM 44 35483 - 35536 + r 100 -22.5 -4.4078 | opp_overlap 35482 35495 35505, overlap 35487 35530 35531 35532 CGACGGGCATATGAT CGGTCTGACCAACGCGCCAGAAGGG GGAA TCCTCCTGGCGCGTTGGTTAGTCGG TTTTAGTTCAGACCG TERM 45 35487 - 35532 + r 100 -24.9 -2.80479 | opp_overlap 35482 35495 35505, overlap 35483 35530 35531 GGGCATATGATCGGT CTGACCAACGCGCCAGAAGGG GGAA TCCTCCTGGCGCGTTGGTTAG TCGGTTTTAGTTCAG TERM 46 35524 - 35495 - R 100 -17.2 -3.14344 | opp_overlap 35487 35483, overlap 35482 35505 GATCGGTCTGACCAA CGCGCCAGAAGG GGGAAT CCTCCTGGCGCG TTGGTTAGTCGGTTT p1ECUMN_0042 36069 - 35539 - | conserved hypothetical protein; putative exported protein TERM 47 35737 - 35754 + g 70 -4.1 -4.59109 | overlap 35735 35740 GCTGGCAACCATCGG CATGAAG GTGC CTTCCTG TTTTTCGCCCGTGTC TERM 48 35820 - 35830 + g 74 -2.4 -5.14645 | GGATCCATTCCCCTG CGCC AAA GCCG TTTTTATTGCCTTCT p1ECUMN_0043 38053 - 36107 - | putative outer membrane protein,putative Iron permease FTR1 family TERM 49 38086 - 38072 - R 70 -5.8 -4.40333 | opp_overlap 38072 38070 GCCAAAGAATACAAA TGATAA TTA TTATCA TATCTTTTTGTCGCG TERM 50 38309 - 38268 - R 87 -10.2 -4.329 | opp_overlap 38271, overlap 38258 TAACAGAGGAATAAA TCCCCCTGCCGACAGTGA TATTAT TCATTATCGGCAGGCAGA AATAAAACGCGTTAT p1ECUMN_0045 39155 - 38340 - | sodium-translocating NADH dehydrogenase (ubiquinone) gamma subunit TERM 51 39332 - 39315 - R 100 -12.7 -5.03145 | CAATGGGTTAAAAAA TGCCGGG TTTC CCCGGCA CGCTATCAAAACATG scsD 39844 - 39338 - | secreted copper-sensitivity suppressor D scsC 40061 - 39834 - | Secreted copper-sensitivity suppressor C TERM 52 40048 - 40069 + g 79 -10.1 -3.75418 | overlap 40050 GTACTATAAGGGCTT CCCCGGCAT GTCA ATGCCGGTG TTTACGGTTTCTGTC TERM 53 40050 - 40067 + g 82 -11.3 -3.44991 | overlap 40048 ACTATAAGGGCTTCC CCGGCAT GTCA ATGCCGG TGTTTACGGTTTCTG p1ECUMN_0048 40294 - 40142 - | transposase IS26 fragment insA 40455 - 40730 + | IS1 repressor protein InsA insB 40649 - 41152 + | transposase p1ECUMN_0051 41203 - 42330 + | transposase, IS4 family, IS10 tetD 42756 - 42340 - | putative transcriptionnal regulator involved in tetracycline resistance TERM 54 42542 - 42555 + g 74 -3.1 -5.00616 | overlap 42538 ATATAGCTAGCCAGT GTGAC CCCT GTTAC TTTTTTGAACAGCCG tetC 42769 - 43437 + | putative transcriptionnal regulator involved in tetracycline resistance TERM 55 43510 - 43484 - T 86 -7.4 -5.0538 | gap 1, opp_overlap 43484 43486, overlap 43486 CTTTATCGTAAAAAA TG-CCCTCTTG GGTTAT CAAGAGGGTCA TTATATTTCGCGGAA TERM 56 43484 - 43510 + T 71 -8.1 -3.81488 | gap 1, opp_overlap 43484 43486, overlap 43486 CTTTATCGTAAAAAA TG-CCCTCTTGG GTTA TCAAGAGGGTCA TTATATTTCGCGGAA TERM 57 43486 - 43507 + T 76 -10.9 -2.99057 | opp_overlap 43484 43486, overlap 43484 TTATCGTAAAAAATG CCCTCTTGG GTTA TCAAGAGGG TCATTATATTTCGCG TERM 58 43507 - 43486 - T 71 -10.2 -2.77166 | opp_overlap 43486 43484, overlap 43484 TTATCGTAAAAAATG CCCTCTTG GGTTAT CAAGAGGG TCATTATATTTCGCG tetA 44803 - 43550 - | tetracycline efflux transporter TERM 59 43915 - 43929 + g 71 -2.1 -5.01732 | gap 1 TATCTGCAATAAATC CGAGCA GTAC TGC-CG TTTTTTCGCCCCATT TERM 60 44811 - 44795 - G 82 -9.5 -4.18506 | GGAGTGGTAAAATAA CTCTATC AAT GATAGAG TGTCAACAAAAATTA tetR 44834 - 45460 + | Tetracycline repressor protein class B from transposon Tn10 jemC 46124 - 45438 - | Bacterial regulatory protein of the arsR family p1ECUMN_0057 46629 - 46132 - | conserved hypothetical protein, putative regulatory protein in the aminoacid metabolism TERM 61 46591 - 46581 - G 70 -4 -4.59853 | overlap 46567 CTAATTTTGTAAAAA TCAA ATA TTGA CTCTCGCCCTTCTTG TERM 62 46617 - 46631 + g 71 -2.8 -4.74103 | overlap 46618 TCTTGTTGAGCTTTC GCATGT AAA ACATGA TTTTTCCATTGCAGA insB 47274 - 46771 - | transposase insA 47468 - 47193 - | IS1 repressor protein InsA TERM 63 47577 - 47560 - R 71 -4.9 -4.55128 | gap 1, overlap 47562 47569 ACGTTTAAATCAAAA CT-GGTGA AAC TCACCCAG GGATTGGCTGAGACG insB 48305 - 47802 - | transposase insA 48499 - 48224 - | IS1 repressor protein InsA p1ECUMN_0064 48751 - 48647 - | hypothetical protein pemK 49212 - 48748 - | Plasmid stable inheritance protein TERM 64 49016 - 48985 - GR 79 -9.4 -3.74693 | gap 1, opp_overlap 48985, overlap 48986 GGTCACGCGATTAAA GGCCGCCGGTG-TGA CAA TCAGCACCGGCCGCG TTCCCTGCTGCTCAT TERM 65 48985 - 49016 + gr 71 -9.4 -3.10894 | gap 1, opp_overlap 48985 48986 GGTCACGCGATTAAA GGCCGCCGGTG-TGA CAA TCAGCACCGGCCGCG TTCCCTGCTGCTCAT TERM 66 49015 - 48986 - GR 86 -12.9 -2.84602 | gap 1, opp_overlap 48985, overlap 48985 GTCACGCGATTAAAG GCCGCCGGTG-TGA CAA TCAGCACCGGCCGC GTTCCCTGCTGCTCA pemI 49339 - 49082 - | Plasmid stable inheritance repressor protein TERM 67 49374 - 49357 - R 70 -5.7 -4.38712 | TTCACCTCCATAAAA GTTATAT TTAA ATATAAC ATCCACTAAAAAAAC p1ECUMN_0067 49621 - 49400 - | hypothetical protein p1ECUMN_0068 50085 - 49432 - | conserved hypothetical protein; putative membrane protein; putative CAAX amino terminal protease TERM 68 49787 - 49768 - GR 72 -7.8 -3.86194 | AAGTTTCGTCATAAA TGGCTCAG CAGG CAGAGCCA GCGCCTTACCGAGCA TERM 69 50191 - 50176 - R 71 -10.4 -2.82635 | ATCGTTACCAGGATA TGCCGC ATCA GCGGCA TGGAAGGCGGCACTC TERM 70 50251 - 50235 - R 70 -5.7 -4.34345 | opp_overlap 50243, overlap 50236 GATACAGGAGTAAAA CCGCCGA AGC CCGGCGT AAGCCGGTACTGATT TERM 71 50250 - 50236 - R 70 -9.2 -3.19884 | opp_overlap 50243, overlap 50235 ATACAGGAGTAAAAC CGCCGA AGC CCGGCG TAAGCCGGTACTGAT TERM 72 50486 - 50536 + r 100 -21.2 -2.57132 | opp_overlap 50486 50492, overlap 50492 50526 TTACAACATTCATAA TTAAAAGCGACTCTGTTCCGGCCC GAA GGGCCGGGGCGGGGCCGCTTTTCA GTTATGAGGAGGGGC TERM 73 50536 - 50486 - R 100 -14.6 -3.43961 | opp_overlap 50486 50492 50526, overlap 50492 TTACAACATTCATAA TTAAAAGCGACTCTGTTCCGGCCC GAA GGGCCGGGGCGGGGCCGCTTTTCA GTTATGAGGAGGGGC TERM 74 50530 - 50492 - R 100 -13.6 -4.50058 | opp_overlap 50492 50486 50526, overlap 50486 CATTCATAATTAAAA GCGACTCTGTTCCGGCCC GAA GGGCCGGGGCGGGGCCGC TTTTCAGTTATGAGG TERM 75 50492 - 50530 + r 100 -20.2 -4.3208 | opp_overlap 50486 50492, overlap 50486 50526 CATTCATAATTAAAA GCGACTCTGTTCCGGCCC GAA GGGCCGGGGCGGGGCCGC TTTTCAGTTATGAGG TERM 76 50987 - 51002 + r 80 -10.4 -3.79113 | AGACGTGCGGATTCC TCCGGC GCAG GCCGGA TTATTCTGAGGAGGT repA 51892 - 51023 - | Replication initiation protein TERM 77 51192 - 51226 + g 72 -4.9 -4.63218 | gap 1 GTGACGATATCCTGA CGTTCCCTGTTCGCAT CACG ACGCGCAC-GGGCACG TTTTATTCCACGGGA TERM 78 51752 - 51770 + g 70 -5.9 -4.22948 | opp_overlap 51750 51752 51751 GGCGAAATCAAAACG GGAGGTG AAGCC CACCGCC TTTTCCATCAGTTTT TERM 79 51961 - 51988 + r 77 -7 -4.44667 | opp_overlap 51952 ATATGACTATACTCC CCGCATAGCTGA ATTG TTGGCTATACGG TTTCTTGTTAGCCCC TERM 80 52000 - 52044 + r 91 -7.3 -5.25735 | gap 1 ACGGTTTCTTGTTAG CCCCGGTAATC-TTCTTCGT CGCCAA ACATAGAAAGATTATCGGGG TTTTTGCTTTTTTGG TERM 81 52171 - 52183 + r 70 -6.3 -4.20368 | opp_overlap 52170 52171, overlap 52167 CAAATGTTCAAGAAG GTAAC TTA GTTAC TTTCTATTCGCATCA repB 52440 - 52180 - | Replication regulatory protein TERM 82 52622 - 52644 + r 72 -8.5 -3.57561 | opp_overlap 52613 TGGAAACGCCGGGAG CGGGGAAAA CTTGC TTTTTCCCG TTTCCGGGGTTGGAC yihA 53270 - 52680 - | conserved hypothetical protein; putative exported protein p1ECUMN_0072 53517 - 53308 - | putative hemolysin expression-modulating protein hmo p1ECUMN_0073 54099 - 53563 - | putative nuclease TERM 83 54171 - 54155 - R 73 -2.9 -5.1615 | overlap 54156 TTAATATGGAAAAAA CTCTGTG CTA CTCAGAA CTGTCCGGTCATACT p1ECUMN_0074 54481 - 54269 - | hypothetical protein TERM 84 54555 - 54575 + r 71 -4.7 -4.60889 | opp_overlap 54533 54558, overlap 54533 54558 CTGCCGGGTATGGAA GAAGGTTTC AGA GAAGCCTTA TTTTTCCGCCTCCTT TERM 85 54558 - 54572 + r 73 -6.4 -4.41633 | opp_overlap 54533 54558, overlap 54533 54555 CCGGGTATGGAAGAA GGTTTC AGA GAAGCC TTATTTTTCCGCCTC TERM 86 54583 - 54605 + r 100 -12.8 -5.66229 | AAGCCTTATTTTTCC GCCTCCTTTA GTG TGAAGGAGGC TTTTTTATTGTTCAT finO 55170 - 54610 - | Fertility inhibition protein (Conjugal transfer repressor) TERM 87 54799 - 54813 + g 95 -7 -5.24129 | overlap 54801 ACGGGTGATGGCCTT CAGCGC CCT GCGCAG TTTTTTATGCGAGAG TERM 88 54981 - 54999 + g 88 -2.2 -5.58454 | opp_overlap 54976 54979 TCAGATAAATGGACA GCGCCTGT CTG GCCTGCGC TTTTTTTGCTGTCAG p1ECUMN_0076 56133 - 55273 - | conserved hypothetical protein, putative Alpha/beta hydrolase traX 57409 - 56192 - | F pilin acetylase TERM 89 56256 - 56239 - GR 70 -9.1 -3.22951 | overlap 56237 56251 GACAGGCGTAGAATA CCGGGAA AAAA TCCCCGG GCCAGAAACGGGGTA TERM 90 56504 - 56490 - GR 77 -9.2 -3.85698 | opp_overlap 56500 CTGGTGCCGGACAAA GGCCCC CAC AGGGCC ATCAGAAGAATGGCC traI 62228 - 56958 - | DNA helicase I TERM 91 57014 - 57039 + g 100 -13.4 -4.07568 | CCATATCCCGCTCCA TCTGCTGCAG ACGCTC CTGCAGCAGA TTTTCCCGGGCAACC TERM 92 57722 - 57687 - GR 72 -6.8 -4.15044 | gap 1, overlap 57688 TCCCGGTGCAATAAA CCGTGCAGGGCTGTC TCCCCCG GCCAGCCCTGC-CTG ACGGAGAACGGCACG TERM 93 59115 - 59094 - GR 70 -7.3 -3.91897 | gap 1, overlap 59097 CGTGTCATGCAGAAA GGACGC-CAG CGT CTGTGCATCC ACGCCGGCGCTGCGC TERM 94 60090 - 60100 + gr 86 -6.8 -5.00616 | overlap 60084 CAGTCGCTCGCCGTC TGCC ACC GGCA TTTTTTCCGGCCGGA TERM 95 60322 - 60298 - GR 71 -8.6 -3.49102 | gap 1 ATATCCCGCAGATAA CGGCTCCGGCT GTCC AGCCAGA-CCG GTGACAGGGCGGTCA TERM 96 60325 - 60370 + gr 81 -9.5 -4.14739 | overlap 60327 TCCAGCCAGACCGGT GACAGGGCGGTCATGGTCACC TCCG GGTGTCCGAGCACGCCCTGTG TTTTCAGCTCACTGC TERM 97 60327 - 60368 + gr 89 -12.1 -3.67188 | overlap 60325 CAGCCAGACCGGTGA CAGGGCGGTCATGGTCACC TCCG GGTGTCCGAGCACGCCCTG TGTTTTCAGCTCACT TERM 98 60680 - 60692 + gr 70 -4.1 -4.60487 | overlap 60677 GCAGGGTTAACGTCT CTTTC AGG GAGAG TTTTTCGCCCTGGTC p1ECUMN_0079 64525 - 62228 - | Protein traD p1ECUMN_0080 65379 - 64576 - | hypothetical protein TERM 99 65452 - 65413 - R 88 -12.2 -3.55761 | opp_overlap 65426 TATTTATTTCGGAAA CGCCGGGAGGTGACAAAA TTTA TTTTGTTACATCCCGGGG TTGGACAACGAGCAA TERM 100 65506 - 65484 - R 72 -9.8 -3.14931 | GCGAGGCGTCAGCAA GGAGGCCGGT CAG ATCAGCCTCC TGACGAGGTTCAGAG traT 66250 - 65516 - | complement resistance protein precursor TERM 101 66053 - 66071 + g 78 -5.3 -4.8048 | GCCCTGCAGCCCACT CATGTCT TTATC AGACGTG TTTTTGATCTGCAGA traS 66781 - 66296 - | Surface exclusion inner membrane protein traG 69619 - 66797 - | mating contact stabilization protein traH 70998 - 69616 - | F pilus assembly protein precursor trbF 71401 - 70976 - | hypothetical protein trbJ 71729 - 71349 - | hypothetical protein trbB 72171 - 71626 - | putative F pilus assembly periplasmic protein TERM 102 72004 - 72016 + gr 75 -4.7 -4.74285 | opp_overlap 72004, overlap 72001 GCTGAGGCGGAACCA GCGGG GAG CCGGC TTTTCTGTTCTGGCT TraQ 72442 - 72158 - | F pilin synthesis protein traF 73967 - 73194 - | F pilus assembly protein precursor TERM 103 73624 - 73634 + gr 90 -6.8 -5.03715 | TCCAGTTCGGGATGC GCCA GCA TGGC TTTTTTGGCGCTCAT trbE 74190 - 73930 - | membrane component traN 76064 - 74214 - | mating contact stablization protein TERM 104 74536 - 74546 + g 75 -5.4 -4.67692 | overlap 74530 CAGAACTCTCCGACA CTGA CGG TCAG TTTGTTTGATTTTGC trbC 76711 - 76061 - | F pilus assembly protein precursor p1ECUMN_0094 77019 - 76708 - | conserved hypothetical protein, putative membrane protein TERM 105 76912 - 76894 - G 72 -4.6 -4.6313 | overlap 76896 TGCAAAATAAAATAA TATAACGG GCA CCATTACA AGACCAAAAGGAAAT traU 78035 - 77043 - | Conjugal transfer protein precursor traW 78778 - 78032 - | F pilus assembly protein precursor TERM 106 78100 - 78077 - GR 74 -10.2 -3.15544 | TTCCACCTTCAGGAA GCGATCGCCG GGAA CGGCGCTCAC CCGTGCCGGGACCTG trbI 79047 - 78661 - | F pilus extension/retraction protein traC 81674 - 79044 - | F pilus assembly protein TERM 107 80499 - 80488 - G 70 -5.8 -4.18094 | GAAATCAGCTCAAAA CCGT TTTT ACGG AAGCTGTTCAGGATG TERM 108 81233 - 81260 + g 72 -7.6 -3.86202 | overlap 81234 GCAGATTCATCCCCT CCGGCAGCGGAA ACTG TGTCGCTGCCGC TTTCATATAATAGGC TERM 109 81234 - 81259 + g 71 -11.1 -2.914 | overlap 81233 CAGATTCATCCCCTC CGGCAGCGGAA ACTG TGTCGCTGCCG CTTTCATATAATAGG p1ECUMN_0099 81973 - 81800 - | hypothetical protein p1ECUMN_0100 82259 - 82041 - | hypothetical protein yfiA 82854 - 82339 - | conserved hypothetical protein, putative membrane protein traR 83026 - 82805 - | putative conjugal transfer protein TERM 110 83142 - 83120 - R 72 -6.8 -4.2074 | opp_overlap 83124, overlap 83121 TTTTGAATACAGAAA GCCCGCCGGC ATT GCCGGCTGAT ATACAACTTCAGGGC TERM 111 83141 - 83121 - R 73 -10.3 -3.11962 | opp_overlap 83124, overlap 83120 TTTGAATACAGAAAG CCCGCCGGC ATT GCCGGCTGA TATACAACTTCAGGG TERM 112 83124 - 83138 + r 81 -12.8 -2.63631 | opp_overlap 83121 83120 GAATACAGAAAGCCC GCCGGC ATT GCCGGC TGATATACAACTTCA traV 83676 - 83161 - | F pilus assembly protein precursor TERM 113 83445 - 83414 - G 85 -13.7 -2.80935 | gap 1, opp_overlap 83436, overlap 83369 83368 AGTGCAGTCACTACA GGC-CCGCGGCCAG ATGGG CTGGCCGCGGTGAC GGCCCGCACCGTGGT TERM 114 83436 - 83459 + g 76 -11 -3.30159 | gap 1, opp_overlap 83414 GGCCAGATGGGCTGG CCGCGGTGACG GCC CG-CACCGTGG TTGTCCGGAAGTTCC TERM 115 83480 - 83509 + g 88 -12.2 -3.70902 | overlap 83497 CGGAAGTTCCCTTCA GCCAGGC-GCGGCA GTGA TGCCGCAGCC-GGC TTTGCATCTGCAGGC TERM 116 83523 - 83533 + g 81 -6.8 -4.6902 | overlap 83497 83517 GCTTTGCATCTGCAG GCTG CTC CAGC TTTTTGGCCTTCTCA p1ECUMN_0104 83906 - 83673 - | conserved hypothetical protein trbG TERM 117 83724 - 83737 + g 70 -3.8 -4.64766 | ATCATTCTTCAAATC CCTG ACCGTA CAGG TTTTTACAATGTCAG p1ECUMN_0105 84271 - 83918 - | Conserved hypothetical protein trbD traP 84815 - 84225 - | putative conjugal transfert protein traB 86232 - 84805 - | F pilus assembly protein TERM 118 85730 - 85720 - G 81 -8.2 -4.37092 | ATTCCCGGGATAAAA CGCC GTC GGCG GTGGAACAGCAACGC traK 86960 - 86232 - | F pilus assembly protein precursor TERM 119 86456 - 86444 - G 72 -10.5 -3.10344 | opp_overlap 86445 CTGCCACTGAAGACA GCCCC GCC GGGGC CTGCAGGGTTTCCTT TERM 120 86740 - 86728 - G 70 -10.5 -2.82516 | opp_overlap 86723 86728 GTGGCCACCACCACA CCGCC GGA GGCGG TCTGCTCATTATTGG TERM 121 86728 - 86740 + g 71 -10.5 -2.89421 | opp_overlap 86728, overlap 86723 GTGGCCACCACCACA CCGCC GGA GGCGG TCTGCTCATTATTGG traE 87513 - 86947 - | F pilus assembly protein traL 87846 - 87535 - | F pilus assembly protein traA 88220 - 87861 - | Fimbrial protein precursor p1ECUMN_0112 88430 - 88254 - | hypothetical protein insH 88290 - 89306 + | transposase traY 89680 - 89453 - | conjugation transfer protein TERM 122 89552 - 89528 - G 74 -8.6 -3.918 | ATAGAAATCAGGAAA CCGTTTCAGA TGATC TCTGAGACGG ATCTGAACCTCTATA TERM 123 89760 - 89743 - R 100 -5.5 -5.86965 | overlap 89745 ACCGACGAAAAAAAA CACGCCA AAAT TGGCGCA CCTTATTTAACATTT TERM 124 89758 - 89745 - R 82 -8.1 -4.5787 | overlap 89743 CGACGAAAAAAAACA CGCCA AAAT TGGCG CACCTTATTTAACAT traJ 90520 - 89774 - | co,jugation transfer regulator protein TERM 125 90488 - 90526 + g 100 -12.4 -4.37198 | overlap 90489 90490 TAAGGATTCTATGGA CAGTCGATGCAGGGAGTT CAG ACCTCCCTGCATCGGCGA TTTTCAGTTTCAATT TERM 126 90489 - 90525 + g 100 -15.9 -3.21234 | overlap 90488 90490 AAGGATTCTATGGAC AGTCGATGCAGGGAGTT CAG ACCTCCCTGCATCGGCG ATTTTCAGTTTCAAT TERM 127 90490 - 90524 + g 100 -19.4 -2.52017 | overlap 90489 90488 AGGATTCTATGGACA GTCGATGCAGGGAGTT CAG ACCTCCCTGCATCGGC GATTTTCAGTTTCAA traM 91037 - 90654 - | Conjugal transfer protein TERM 128 91234 - 91273 + H 93 -9.5 -4.95155 | opp_overlap 91237, overlap 91215 91235 91237 TCTATGAGTTGCGTT AAATTCATTGGTGAATC ATATGC GATTCACCAATGAATCC TTTTTATAATGTAAA TERM 129 91235 - 91272 + H 100 -13 -3.5637 | opp_overlap 91237, overlap 91215 91234 91237 CTATGAGTTGCGTTA AATTCATTGGTGAATC ATATGC GATTCACCAATGAATC CTTTTTATAATGTAA TERM 130 91270 - 91237 - H 100 -16.3 -3.5393 | opp_overlap 91215 91235 91234 91237 ATGAGTTGCGTTAAA TTCATTGGTGAATCA TATG CGATTCACCAATGAA TCCTTTTTATAATGT TERM 131 91237 - 91270 + H 100 -15.6 -3.34705 | opp_overlap 91237, overlap 91215 91235 91234 ATGAGTTGCGTTAAA TTCATTGGTGAATC ATATGC GATTCACCAATGAA TCCTTTTTATAATGT TERM 132 91637 - 91593 - g 100 -23.1 -3.98075 | opp_overlap 91594 91610 ATATCATGGAAAGAA TCCCGTTACCGGGTTAATGCC ATC GGTATTAATCCGGTAACGGGA TATGGCAGCGGACTG yubQ 91368 - 91970 + | putative transglycosylase TERM 133 92268 - 92216 - T 100 -32.7 -3.63694 | opp_overlap 92216 92222 92227 92232, overlap 92227 92232 AGCGATGCCGAAGAA TGATAATATAAGTAAAGCCCCGAAA AAT TTTCGGGGCTTTACTTATATTATCA TGACTTCCACTTTCT TERM 134 92216 - 92268 + T 100 -32.7 -2.56314 | opp_overlap 92216 92227 92232, overlap 92222 92227 92232 AGCGATGCCGAAGAA TGATAATATAAGTAAAGCCCCGAAA AAT TTTCGGGGCTTTACTTATATTATCA TGACTTCCACTTTCT TERM 135 92222 - 92262 + T 100 -25.9 -3.44319 | opp_overlap 92216 92227 92232, overlap 92216 92227 92232 GCCGAAGAATGATAA TATAAGTAAAGCCCCGAAA AAT TTTCGGGGCTTTACTTATA TTATCATGACTTCCA TERM 136 92257 - 92227 - T 100 -21.4 -3.80597 | opp_overlap 92222 92216 92227 92232, overlap 92216 92232 AGAATGATAATATAA GTAAAGCCCCGAAA AAT TTTCGGGGCTTTAC TTATATTATCATGAC TERM 137 92227 - 92257 + T 100 -21.4 -3.77808 | opp_overlap 92227 92216 92232, overlap 92222 92216 92232 AGAATGATAATATAA GTAAAGCCCCGAAA AAT TTTCGGGGCTTTAC TTATATTATCATGAC TERM 138 92232 - 92252 + T 100 -15.5 -4.09827 | opp_overlap 92227 92216 92232, overlap 92227 92222 92216 GATAATATAAGTAAA GCCCCGAAA AAT TTTCGGGGC TTTACTTATATTATC TERM 139 92252 - 92232 - T 100 -15.5 -4.09827 | opp_overlap 92232 92227 92222 92216, overlap 92227 92216 GATAATATAAGTAAA GCCCCGAAA AAT TTTCGGGGC TTTACTTATATTATC yubP 93171 - 92266 - | hypothetical protein TERM 140 92450 - 92474 + g 70 -5.8 -4.20367 | gap 1, overlap 92454 CAGAGATCGTTCTGT TTATCTTCCCG ACGA CGGGGAG-TAA TTATTTGTTCAGGCG TERM 141 92488 - 92498 + g 87 -4.6 -5.17488 | AATTATTTGTTCAGG CGTC ACT GGCG TTTTATTTTCATCTT yubO 93493 - 93206 - | hypothetical protein TERM 142 93665 - 93722 + r 83 -10.9 -3.60098 | opp_overlap 93674 93681, overlap 93681 CTGACGCACCTGTCC TGGGCAGAACGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTGGGCTGTTCA TTTACCCTGGACAGT TERM 143 93713 - 93674 - R 74 -9.6 -3.28712 | opp_overlap 93665 93681, overlap 93681 CTGTCCTGGGCAGAA CGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTG GGCTGTTCATTTACC TERM 144 93956 - 93926 - R 70 -9.7 -2.87564 | gap 2 CCACGGCGCGACAGA GGC-GGC-GCGACCG GAA CGGTCGCTGCAAGCC CGGGGTTTCGCGTCA TERM 145 94234 - 94210 - R 100 -15.7 -4.08692 | opp_overlap 94213, overlap 94213 GAAGGCGGGGGAAAA GAACGGGCGCC GCA GGCGCACGTTC ATCCCCGTTCCCGGA TERM 146 94213 - 94231 + r 81 -11.6 -3.16742 | opp_overlap 94213 94210 GGCGGGGGAAAAGAA CGGGCGCC GCA GGCGCACG TTCATCCCCGTTCCC TERM 147 94231 - 94213 - R 93 -11.6 -4.17048 | opp_overlap 94213, overlap 94210 GGCGGGGGAAAAGAA CGGGCGCC GCA GGCGCACG TTCATCCCCGTTCCC TERM 148 94334 - 94309 - R 80 -8.9 -4.08144 | opp_overlap 94330, overlap 94327 GCCAGCAAGGAGAAA GGGACCACCGG CGAA CCAGCAGCCCC TTTATAAAGGCGCTT TERM 149 94399 - 94382 - R 100 -14.1 -4.10161 | opp_overlap 94374 CATCAGCCCTGAAAA GGCGGGC CTGC GCCCGCC TCCAGGTTGCTACTT flmC 94625 - 94413 - | putative F-plasmid maintenance protein TERM 150 94473 - 94483 + g 75 -6.8 -4.35116 | opp_overlap 94472 TCTCTGTAACGAATC TCGC ACA GCGA TTTTCGTGTCAGATA TERM 151 94632 - 94665 + r 80 -7.6 -4.58466 | gap 1, overlap 94662 TCTAAGCATGCAGGG GCCTCGTGGGTTAAT GAAAA ATTAACT-ACGGGGC TTTTGTCCTTCTGCC psiA 95562 - 94843 - | Plasmid SOS inhibition protein TERM 152 95114 - 95145 + g 100 -13 -4.02334 | gap 1 GCCAGTTCGATTTCA GCCTGGGCG-ACCAG CGC CTGGTACGCACGGGC TTTCTGCTCTGCCTC psiB 95996 - 95559 - | Plasmid SOS inhibition protein TERM 153 96013 - 96035 + r 83 -12.6 -3.03203 | overlap 96010 GTATCTCCCTTGCTG CCGCCCCGTC TCC GGCGGGGCGA TGTGGTTGTTCATCA ycjA 98096 - 96048 - | conserved hypothetical protein, putative ParB-like nuclease TERM 154 96229 - 96246 + gr 70 -4.1 -4.64766 | gap 1 CCTGCCTCATTCAGG GCTGC-GA TAA TCTGCGGC TTTTTCAGGTGTCCG TERM 155 96246 - 96267 + gr 70 -6.7 -4.10552 | gap 1 TGCGATAATCTGCGG CTTTTTCAGG TGT CC-GAAAAAG TTTGCTTTCGTCGGC TERM 156 98034 - 98059 + gr 74 -11.1 -2.50699 | overlap 98030 98033 98031 ATAATTGCTTATGTC CTGCCGGACGT TTGC GCGTCCGGCAC CTCTCTTACTTAAGA yubL 98325 - 98065 - | hypothetical protein ssb 98921 - 98355 - | Single-stranded DNA-binding protei TERM 157 99055 - 99112 + r 83 -10.9 -3.60098 | opp_overlap 99064 99071, overlap 99071 CTGACGCACCTGTCC TGGGCAGAACGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTGGGCTGTTCA TTTACCCTGGACAGT TERM 158 99103 - 99064 - R 74 -9.6 -3.28712 | opp_overlap 99055 99071, overlap 99071 CTGTCCTGGGCAGAA CGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTG GGCTGTTCATTTACC TERM 159 99346 - 99316 - R 70 -9.7 -2.87564 | gap 2 CCACGGCGCGACAGA GGC-GGC-GCGACCG GAA CGGTCGCTGCAAGCC GGGGGTTTTGCGTCA TERM 160 99632 - 99609 - R 100 -15.2 -3.90112 | opp_overlap 99609, overlap 99580 GTCCGCGTAATGAAA GGGGCGGCGC GTGA GCGCGGCCCC TTTCAGCGCCACCGA TERM 161 99609 - 99632 + r 100 -15.2 -3.53012 | opp_overlap 99580 99609 GTCCGCGTAATGAAA GGGGCGGCGC GTGA GCGCGGCCCC TTTCAGCGCCACCGA ydcA 100271 - 99708 - | putative adenine-specific DNA methylase TERM 162 99783 - 99756 - G 78 -9.1 -3.99678 | gap 1 ATCGGTATAAGCAAA CGTGCCGCGCGG CAGCT CCTCGCGG-ACG TCAGAAAACGGTAAC TERM 163 100193 - 100181 - G 90 -7.7 -4.88736 | CAGGACTCACAAAAA GCTGA GAT TCAGC CCGGATTTCAGCAAC TERM 164 100286 - 100313 + r 77 -11.2 -2.7487 | overlap 100284 100288 100295 TGTCATTATCTCCGT CATCCCCCGGGG ATTT CCCGGGGGGATA TACCTTATTTCTGTG ydbA 101679 - 100318 - | hypothetical protein TERM 165 101217 - 101233 + g 76 -7.9 -4.1899 | opp_overlap 101214 GTTCAAAGAGCATCA CGGCACG TTT CATGCCG TTTTCAATACGCTGC TERM 166 101851 - 101828 - R 78 -8.8 -4.07568 | opp_overlap 101816 101827 101816 CGCCCCCGGTGAAAA CTCCGGGCTA TGTG TCGCCCGAAG GCTTTCAGCACGGGG TERM 167 102032 - 102048 + r 100 -12.3 -5.24989 | opp_overlap 102032 TGCGGCATGGATTAA GCAGGTC CCT GACCTGC TTTTTTCATATCTGC TERM 168 102048 - 102032 - R 86 -12.3 -3.18264 | opp_overlap 102032 TGCGGCATGGATTAA GCAGGTC CCT GACCTGC TTTTTTCATATCTGC TERM 169 102328 - 102385 + r 83 -10.9 -3.60098 | opp_overlap 102337 102344, overlap 102344 CTGACGCACCTGTCC TGGGCAGAACGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTGGGCTGTTCA TTTACCCTGGACAGT TERM 170 102376 - 102337 - R 74 -9.6 -3.28712 | opp_overlap 102328 102344, overlap 102344 CTGTCCTGGGCAGAA CGCAAAATTTTTTACC GGGTTTTG GGTAAAAAATTTTGTG GGCTGTTCATTTACC TERM 171 102858 - 102811 - R 100 -28.6 -4.04318 | CGGACACATCACAAA CGGGAAGGGTAACGGGCGACGC GCCA GCGTGGCCCGTTACCCTTCCGG CAGGCGCCAGCCTGC p1ECUMN_0130 103115 - 102924 - | hypothetical protein p1ECUMN_0131 103486 - 103112 - | hypothetical protein TERM 172 103554 - 103574 + r 86 -13.9 -2.57244 | overlap 103549 TCTCGTCTCCTTTAC AGGGGCGGC ATT GCCGCCCCG TCCGTTAATCAGTCA p1ECUMN_0132 104008 - 103583 - | putative antirestriction protein TERM 173 103754 - 103738 - G 70 -10.9 -2.76189 | overlap 103735 CAAGGGAGGTAAGGA TGATGCC TGC GGCATCA GCACTCACGGTACGG TERM 174 104338 - 104320 - R 81 -11 -3.52515 | overlap 104313 ACTGAAAACCCACAA GGCCATGC CCC ACATGGCC GGGTAAAGAGGAGCC TERM 175 104416 - 104397 - R 91 -11.4 -4.14739 | GGACCGACTGGAAAA GGCGGAGA TTTT TCCCCGCC AGCGTCATCATTTCC ycfA 105194 - 104424 - | hypothetical protein TERM 176 104633 - 104623 - G 75 -4.6 -4.7497 | overlap 104627 TCCACCGACGAAAAA CGAG CGC CCCG GTTCAGGATGGCATC yfcB 105673 - 105239 - | hypothetical protein yfeB 105908 - 105687 - | hypothetical protein TERM 177 105872 - 105884 + g 71 -3.3 -4.8048 | overlap 105865 105869 105872 TGGCCACCTCCGCCA CGTCG GCG CGAAG TTTTTCGTGTCCGGC p1ECUMN_0137 106592 - 105909 - | putative Site-specific DNA-methyltransferase TERM 178 106966 - 106941 - R 100 -16.9 -4.13767 | overlap 106945 TCCTTTACCGGAAAA GAAACGGGCGG TTGC CCGCCCGTCTC CGTCATACTTCATCC TERM 179 106962 - 106945 - R 100 -14.1 -4.67048 | overlap 106941 TTACCGGAAAAGAAA CGGGCGG TTGC CCGCCCG TCTCCGTCATACTTC yccB 107947 - 106976 - | hypothetical protein TERM 180 107162 - 107178 + gr 73 -9.3 -3.44146 | CCAGTGCTCCAGCGT GCAGCCG AAA CGGCGGC TTAATTCTGCAACAA TERM 181 107825 - 107810 - GR 73 -6.1 -4.36914 | opp_overlap 107823 GGCGCGGCGATAAAA CGGTG TGACTG CACCG CTGGCCAGCCGTTTA TERM 182 107939 - 107923 - GR 70 -9.4 -2.87132 | TTCTCCTCTCACATA CGGCCT CCATC AGGCCG TGCCGCACCTGTAAC yuaZ 108185 - 107916 - | hypothetical protein TERM 183 108170 - 108136 - GR 79 -7.9 -4.386 | gap 1, overlap 108107 GAACCGTGCACAAAA TGCTGTGGATAAGCTG GACA CAGCAG-TCCACAGCA GGCATACAGCCACAC p1ECUMN_0141 109517 - 108297 - | putative transposase p1ECUMN_0142 110054 - 109536 - | hypothetical protein impC 110189 - 110437 + | UV protection and mutation protein impA 110434 - 110871 + | UV protection and mutation protein TERM 184 112836 - 112816 - g 77 -9.7 -3.59979 | overlap 112820 112830 CTTCGCCAGTTCAAA GAAACGCCG GAA CAGCGCTTC GCGCTGGAGCAGGAA TERM 185 112832 - 112820 - g 75 -6.9 -4.44046 | overlap 112816 112830 GCCAGTTCAAAGAAA CGCCG GAA CAGCG CTTCGCGCTGGAGCA istA 111994 - 113166 + | putative transposase ORF1, IS21 istB 113163 - 113963 + | putative transposase ORF2, IS21, putative ATP-binding protein TERM 186 114268 - 114289 + T 84 -4.5 -5.46698 | overlap 114271 GAGATCCCCATTGCT TCATTCTGA TATA TCAGAATAA TTTTTTCATTTTAAG p1ECUMN_0150 114709 - 114281 - | putative stable plasmid inheritance protein TERM 187 114320 - 114354 + gT 74 -2.7 -5.01732 | ACGCACATCATTCAT TGCCTCCTGCACCGA ATCAG TAGCAGAAGGAGGCA TTTTTTCAACAGATT parM 115649 - 114678 - | Plasmid segregation protein p1ECUMN_0152 115878 - 116522 + | hypothetical protein TERM 188 116598 - 116573 - g 72 -8.3 -3.80733 | gap 1 GTTACGGTAGAACAA GCAGAGGCTCTG GCT CAGCGCCT-TGC GGATAAACCATACGG TERM 189 116656 - 116645 - g 70 -4.4 -4.58563 | GAACCAGAAAAACAA TGTC GGAC GACA ATCTCTCTTGGTGAA p1ECUMN_0153 116516 - 116791 + | conserved hypothetical protein, putative Helix-turn-helix protein TERM 190 116861 - 116884 + T 84 -4.6 -5.41143 | opp_overlap 116848 116861 CACCCTTGCATACAA GAGATCAC ATATTGCA GTGGTCTC TTTTTTTACAGAATA TERM 191 116924 - 116898 - T 73 -9 -3.48276 | opp_overlap 116898 116902 116908, overlap 116902 116903 116908 TCTTTTTTTACAGAA TAAATCACAATT CAT AATTATGATTTA TGAATTATGCGTGTC TERM 192 116920 - 116902 - T 70 -5.4 -4.38927 | opp_overlap 116898 116902 116908, overlap 116898 116903 116908 TTTTTACAGAATAAA TCACAATT CAT AATTATGA TTTATGAATTATGCG resD 117738 - 116929 - | Resolvase TERM 193 117383 - 117396 + g 77 -5.9 -4.66609 | overlap 117381 GCAGGCGTTCTTCCT GCCGT CCTG GCGGC TTTTTCGGTCCGCTG ccdB 118071 - 117739 - | Cytotoxic protein ccdA 118324 - 118046 - | antitoxin protein (Plasmid maintenance) TERM 194 118758 - 118746 - RH 72 -5.5 -4.4518 | overlap 118754 AAGCAAAATTCAAAA CTGAC TAA GCCAG AAATAGCAACAACAA TERM 195 118984 - 118953 - RH 95 -14.6 -3.21099 | overlap 118957 CGCTGCGAGGACGAA GAAAGTATTACGGC TAAA GCCGTAATACCTCC CCATCCAGCTTCAAG TERM 196 118980 - 118957 - RH 100 -14 -4.2704 | overlap 118953 GCGAGGACGAAGAAA GTATTACGGC TAAA GCCGTAATAC CTCCCCATCCAGCTT TERM 197 119740 - 119758 + rH 100 -11.7 -5.76949 | opp_overlap 119742 AGGTTGAAGTCTCAA CACCCCC ACTAC GGGGGTG TTTTTTTTACCAATA TERM 198 119909 - 119891 - RH 91 -6.7 -5.36441 | gap 1, overlap 119893 TTTCCAGATAAAAAA CACCCTCC CGAA GGAGGG-G ACAGACACATTCATA TERM 199 119908 - 119893 - RH 87 -10.4 -4.31943 | overlap 119891 TCCAGATAAAAAACA CCCTCC CGAA GGAGGG GACAGACACATTCAT TERM 200 120205 - 120157 - RH 100 -20.5 -3.63694 | opp_overlap 120162, overlap 120162 120166 ATCTATTGCGAAGAA TCAGAGTAACAGGGCCCCATGAT ATA ATCATGGGGCCCTGTTGCTTTTA CAGATGTAAAAACGA TERM 201 120200 - 120162 - RH 100 -24.8 -3.01745 | opp_overlap 120162, overlap 120157 120166 TTGCGAAGAATCAGA GTAACAGGGCCCCATGAT ATA ATCATGGGGCCCTGTTGC TTTTACAGATGTAAA TERM 202 120162 - 120200 + rH 100 -27 -4.13014 | opp_overlap 120162 120157 120166 TTGCGAAGAATCAGA GTAACAGGGCCCCATGAT ATA ATCATGGGGCCCTGTTGC TTTTACAGATGTAAA TERM 203 120196 - 120166 - RH 100 -24.2 -3.35176 | opp_overlap 120162, overlap 120162 120157 GAAGAATCAGAGTAA CAGGGCCCCATGAT ATA ATCATGGGGCCCTG TTGCTTTTACAGATG TERM 204 120438 - 120410 - RH 100 -14.7 -3.32807 | TCAAAAGAGGAGCAA CAGTTATCCACAG ATT CTGGGGATAACTG CGAAAAGAATATGTG TERM 205 121030 - 121014 - gR 74 -2.2 -5.10767 | opp_overlap 121014 TACTGAACAGAAAAA TCGCCA GCCAA TGGTGA TCATTACAGAATGTT p1ECUMN_0160 121415 - 121095 - | hypothetical protein ydiA 120586 - 121227 + | hypothetical protein SEQUENCE gi|218703261|ref|NC_011751.1| Escherichia coli UMN026, complete genome (length 5202090) thrL 149 - 214 + | thr operon leader peptide TERM 1 239 - 260 + F 100 -13 -5.75342 | opp_overlap 239 GAAACACAGAAAAAA GCCCGCAC CTGACA GTGCGGGC TTTTTTTTCGACCAA TERM 2 260 - 239 - f 100 -13.7 -5.51046 | opp_overlap 239 GAAACACAGAAAAAA GCCCGCACC TGAC AGTGCGGGC TTTTTTTTCGACCAA TERM 3 613 - 601 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTGG TERM 4 2626 - 2613 - g 73 -3.7 -4.81249 | overlap 2592 2614 GTTCAAAGTGAAAAA CGGCG AAAA CGCCC TGGCCTTCTATAGCC thrA 295 - 2757 + | fused aspartokinase I ; homoserine dehydrogenase I TERM 5 3019 - 2997 - g 74 -8.5 -3.90291 | gap 1 AGCTGGGTAAGCAAA TTCCAGTGGC GATG GCC-CTGGAA AAGAATATGCCGATC thrB 2759 - 3691 + | homoserine kinase thrC 3692 - 4978 + | threonine synthase TERM 6 5002 - 5028 + F 91 -8 -5.24129 | gap 1, opp_overlap 5001 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA yaaX 5192 - 5488 + | conserved hypothetical protein; putative exported protein TERM 7 5516 - 5497 - T 74 -7.8 -4.13654 | overlap 5510 CCGCTAAATGACAAA TGCCGGGT AACA ATCCGGCA TTCAGCGCCTGATGC TERM 8 5522 - 5555 + T 79 -11.7 -2.62043 | opp_overlap 5510, overlap 5517 5532 CAATCCGGCATTCAG CGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACGTTAATTCTGCA TERM 9 5597 - 5628 + T 80 -10 -3.737 | opp_overlap 5607, overlap 5598 CTGCATGCTTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTTACTGCAAACTTA TERM 10 5598 - 5627 + T 87 -13.5 -2.83899 | opp_overlap 5607, overlap 5597 TGCATGCTTTTGTAG GCCGGATAAGGCG TTCA CGCCGCATCCGGC ATTTACTGCAAACTT yaaA 6417 - 5641 - | conserved hypothetical protein; family UPF0246 TERM 11 6189 - 6172 - G 73 -9.1 -3.5882 | opp_overlap 6182, overlap 6180 6181 GACATCACCTTTAAA CGCCAGA ATCG CCTGGCG GGCATTCTCCGGCGT yaaJ 7917 - 6487 - | putative amino acid sodium/proton transporter TERM 12 7495 - 7474 - G 73 -3.7 -4.77036 | gap 1, overlap 7476 7488 GGCGATGAGCAAAAA GA-GGGCG AACAGAA CGCCCATC CAGCGCATCCCCAGC talB 8196 - 9149 + | transaldolase B TERM 13 9155 - 9186 + F 72 -9.4 -3.22102 | overlap 9153 9156 TCTGCTGTAATCATT CTTAGCGTGACCGG GAAG TCGGTCACGCTACC TCTTCTGAAGCCTGT TERM 14 9156 - 9185 + F 84 -12.9 -2.5294 | overlap 9155 9153 CTGCTGTAATCATTC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAGCCTG mogA 9264 - 9851 + | molybdochelatase MogA, involved in Moco biosynthesis TERM 15 9874 - 9857 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC GAGC GGGGGGA TCTCAAAACAATTAG yaaH 10452 - 9886 - | conserved hypothetical protein; putative inner membrane protein associated with acetate transport TERM 16 10336 - 10326 - G 75 -6.8 -4.36914 | TGCCGCCGTAGAAAA TGCC CAT GGCA AGAATAATACCGTCA htpY 11314 - 10601 - | heat shock protein TERM 17 11069 - 11101 + g 86 -12.1 -3.56325 | overlap 11072 TTTACCGTGTCCGCG CAGTTTGTTGGCGAT ACT ATCGCCACCAAAATG TTGTAATTCTCCGGC TERM 18 11072 - 11098 + g 76 -12.4 -2.60904 | overlap 11069 ACCGTGTCCGCGCAG TTTGTTGGCGAT ACT ATCGCCACCAAA ATGTTGTAATTCTCC TERM 19 11200 - 11212 + g 80 -5.5 -4.93968 | overlap 11191 TCAGTACGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT yaaI 11744 - 11340 - | hypothetical protein dnaK 12120 - 14036 + | chaperone Hsp70, co-chaperone with DnaJ TERM 20 14100 - 14061 - f 75 -10.7 -2.91467 | gap 1, opp_overlap 14062 AAACGGGTAATTATA CTGACACGGGCGAAGGGG TATTT CCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAT TERM 21 14062 - 14099 + F 95 -14.2 -3.25823 | gap 1, opp_overlap 14061 AACGGGTAATTATAC TGACACGGGCGAAGGGG TATTT CCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 22 14206 - 14193 - g 71 -2.3 -4.98531 | GCGTGAAATCAAAAA GGCCT ACAA ACGCC TGGCCATGAAATACC dnaJ 14125 - 15255 + | chaperone Hsp40, co-chaperone with DnaK TERM 23 15267 - 15284 + F 83 -12.7 -3.06183 | opp_overlap 15267 CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC TTGGGTAAAAATAGG TERM 24 15284 - 15267 - f 100 -12.7 -4.09739 | opp_overlap 15267 CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC TTGGGTAAAAATAGG TERM 25 15352 - 15331 - f 77 -11.5 -2.74792 | opp_overlap 15331 15332, overlap 15330 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 26 15331 - 15352 + F 100 -13.7 -3.39449 | opp_overlap 15330 15331, overlap 15332 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 27 15332 - 15351 + F 89 -15 -2.63348 | opp_overlap 15331 15330, overlap 15331 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG TERM 28 15576 - 15608 + F 73 -4.9 -4.64844 | gap 1, opp_overlap 15544 TTCAGCATATAGGGG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC TERM 29 16129 - 16142 + G 70 -6.7 -4.06611 | overlap 16126 ATTCTTTAGCAGTGA TGCCT CGGG AGGCA TTATTCTTATCATTG nhaA 16097 - 17263 + | sodium-proton antiporter TERM 30 17279 - 17298 + F 95 -10.7 -4.59414 | CAGGACGGTTTACCG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 17323 - 18228 + | DNA-binding transcriptional activator ECUMN_0018 19225 - 18266 - | conserved hypothetical protein; putative exported protein; putative bacterial adhesin ECUMN_0019 21688 - 19238 - | putative fimbrial biogenesis outer membrane usher protein TERM 31 20295 - 20309 + g 85 -7.2 -4.84219 | TCATAAAAATCGTCA TCATCA CTC TGATGA TTTATTTTATCATTT TERM 32 20823 - 20833 + g 75 -4.6 -4.75372 | opp_overlap 20817, overlap 20817 20817 ATAGTAAATGGTCCT GGGG GAA CCTC TTTTTGGTAAATGGT ECUMN_0020 22384 - 21701 - | putative membrane-associated pilin chaperone TERM 33 22274 - 22284 + g 70 -5.4 -4.35085 | ATTCATTAACTGTAC GAGA ACT TCTC TGTTTTTTTCCGGAT TERM 34 22426 - 22404 - R 100 -14.2 -3.91716 | overlap 22406 TCACTCCGTAAATAA TACCGGTAGC AGA GCTACCGGCA AAAAACGTTAATCTG TERM 35 22424 - 22406 - R 100 -14.6 -3.54755 | overlap 22404 ACTCCGTAAATAATA CCGGTAGC AGA GCTACCGG CAAAAAACGTTAATC ECUMN_0021 22967 - 22434 - | putative fimbrial-like protein TERM 36 22623 - 22613 - G 72 -6.8 -4.28994 | opp_overlap 22612 22613 CATCATCGAGGAAAA TGGC AAA GCCA ATGTTCTCAGCAGTT ECUMN_0022 24689 - 23268 - | hypothetical protein TERM 37 23744 - 23768 + g 81 -6.6 -4.69415 | AAAGGTTGCTCTTTT CTATTGTTAT ATTTG ATAGCAATAG TTTATTTATATTAAT TERM 38 25128 - 25143 + r 76 -6 -4.57341 | opp_overlap 25114 25111 25129, overlap 25129 AGCAGGTATAAAAAA ACCCGC TTGC GCGGGC TTTTTCACAAAGCTT TERM 39 25129 - 25142 + r 74 -9.5 -3.33922 | opp_overlap 25114 25111 25129, overlap 25128 GCAGGTATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT TERM 40 25142 - 25129 - R 100 -9.5 -5.64274 | opp_overlap 25129 25128, overlap 25114 25111 GCAGGTATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT rpsT 25436 - 25173 - | 30S ribosomal subunit protein S20 yaaY 25539 - 25757 + | hypothetical protein TERM 41 26656 - 26644 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 25765 - 26706 + | bifunctional riboflavin kinase and FAD synthetase TERM 42 26915 - 26897 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 43 27967 - 27944 - g 81 -8.8 -4.38712 | overlap 27945 TGCACGTTGAGAAAA TGCAGCACAG CTAT CCGTGCTGCT GGCGTCACAAAACGC TERM 44 27966 - 27945 - g 81 -12.3 -3.22906 | overlap 27944 GCACGTTGAGAAAAT GCAGCACAG CTAT CCGTGCTGC TGGCGTCACAAAACG ileS 26749 - 29565 + | isoleucyl-tRNA synthetase lspA 29565 - 30059 + | prolipoprotein signal peptidase (signal peptidase II) TERM 45 30119 - 30064 - f 100 -25 -4.68451 | gap 1, overlap 30065 30066 AAAAACAATAATAAA CCCTGCCGGATGCGGCCTACAGATTGC TAC GAAATC-GTAGGCCGCATCCGGCAAAA ATCCTCAAAAATAAG TERM 46 30118 - 30065 - f 100 -26.3 -3.37411 | gap 1, overlap 30064 30066 AAAACAATAATAAAC CCTGCCGGATGCGGCCTACAGATTGC TAC GAAATC-GTAGGCCGCATCCGGCAAA AATCCTCAAAAATAA TERM 47 30117 - 30066 - f 100 -27.6 -2.60006 | gap 1, overlap 30065 30064 AAACAATAATAAACC CTGCCGGATGCGGCCTACAGATTGC TAC GAAATC-GTAGGCCGCATCCGGCAA AAATCCTCAAAAATA TERM 48 30223 - 30200 - g 88 -11 -4.14243 | CACTTCACGCTAAAA CTCGACGATG GCAC CACCGCCGAG TCTACCCGCAACAAC fkpB 30146 - 30595 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) TERM 49 30735 - 30761 + G 70 -5.9 -4.15788 | gap 1 AATCGCTACGTGGTC GATAG-CCTGCG CGAG CGTGGGGCTATC TTTATTGAGCAGATT ispH 30597 - 31547 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein TERM 50 31595 - 31576 - f 82 -9.3 -4.15453 | opp_overlap 31576 31593 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 51 31576 - 31595 + F 100 -9.3 -5.24129 | opp_overlap 31576, overlap 31593 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA rihC 31613 - 32527 + | ribonucleoside hydrolase 3 dapB 32694 - 33515 + | dihydrodipicolinate reductase TERM 52 34907 - 34879 - g 73 -3.7 -4.84761 | overlap 34880 34903 AGATGTGGAGAAAAA CGTGGTGATGATC ACC GCCCAGAACCACG GTTTTGCGGTGGATG carA 33971 - 35119 + | carbamoyl phosphate synthetase small subunit, glutamine amidotransferase TERM 53 35990 - 35960 - g 71 -9 -3.53012 | opp_overlap 35960 35961, overlap 35961 CGGTGCTGCGTGAAA TCGGCGTTGAAACC GGT GGTTCCAACGTCCA GTTTGCGGTGAACCC TERM 54 37718 - 37699 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC GAAAGTGGCGGCGCG carB 35137 - 38355 + | carbamoyl-phosphate synthase large subunit ECUMN_0035 38581 - 38363 - | hypothetical protein TERM 55 38409 - 38428 + g 100 -10 -5.77853 | opp_overlap 38409 38407 ATCGAATAACTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTTGCCCATT caiF 38616 - 39011 + | transcriptional activator TERM 56 39240 - 39262 + T 84 -8.4 -4.33165 | overlap 39255 TCGGCATCACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTTCCTCCATTTGC caiE 39807 - 39217 - | putative acyl transferase caiD 40637 - 39813 - | crotonobetainyl CoA hydratase TERM 57 40304 - 40272 - G 85 -11.9 -3.60296 | opp_overlap 40262, overlap 40288 CAGTGCCAGTTCAAA GCCGCCGCCAAAGGC ATA GCCGTTCACAGCGGC GATAACTGGTTTGTC TERM 58 40680 - 40700 + r 85 -10.4 -4.27211 | overlap 40675 40681 AGCGTGATTATTAGC TGGCAGGG TAGTT CCCTGCCG TTTCATTTATTTAAG TERM 59 40681 - 40699 + r 83 -11.7 -3.15242 | overlap 40680 40675 GCGTGATTATTAGCT GGCAGGG TAGTT CCCTGCC GTTTCATTTATTTAA caiC 42275 - 40707 - | putative crotonobetaine CoA ligase:carnitine CoA ligase TERM 60 41338 - 41319 - G 70 -10 -3.19003 | opp_overlap 41328 41331, overlap 41310 ATAAGACGTCAGCAA GCGAACGC TGAA GCGTTCAC AAAACGCGTCTTTTT TERM 61 41328 - 41348 + g 78 -5.4 -4.77036 | opp_overlap 41310 41319, overlap 41331 CAGCAAGCGAACGCT GAAGCGTT CACAA AACGCGTC TTTTTCCTGCTCCGA TERM 62 41402 - 41379 - G 72 -5.2 -4.53303 | opp_overlap 41384, overlap 41382 CAGGTTGAGATAAAA CATCACTTCC CGCA GGCAGTGTTG CCGATCGTTGGCTGA caiB 43551 - 42334 - | crotonobetainyl CoA:carnitine CoA transferase caiA 44822 - 43680 - | crotonobetaine reductase subunit II, FAD-binding TERM 63 43960 - 43976 + g 73 -3.6 -4.7497 | overlap 43961 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 46367 - 44853 - | L-carnitine/gamma-butyrobetaine antiporter TERM 64 46317 - 46345 + g 87 -4.5 -5.30339 | GACGATTATTAACGG CGGAAAGAAAACC TTC GGTTCTATTCCCG TTTTTCTCTTTTCAT TERM 65 46506 - 46523 + H 87 -6.3 -5.26316 | TCAATTGGCTGCGTT CTGTGAT GTTA GTCACAG TTTTTTATCGGGTAA TERM 66 46674 - 46710 + H 74 -9.7 -3.35695 | overlap 46668 TTTTGCTACGCCATG TTTTCAATATTGGTGAG GGA CTTAACAATATTGAAAG TTGGATTTATCTGCG fixA 46840 - 47610 + | putative electron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain fixB 47625 - 48566 + | putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like TERM 67 49666 - 49649 - g 71 -2.6 -4.90266 | TTCAGTAAGCAAAAA CTGGCG GAATAT CGTCAG CATCTTGAGAGTGGC fixC 48617 - 49903 + | putative oxidoreductase with FAD/NAD(P)-binding domain fixX 49900 - 50187 + | putative 4Fe-4S ferredoxin TERM 68 50512 - 50548 + G 70 -7.3 -4.08706 | opp_overlap 50500 50499, overlap 50499 50499 AATGTTCCTCATCGA TATCATCGCCATCGG CGTGATA TCGGTGGCGACGATG TTTGTCTCATCCCCC TERM 69 50703 - 50721 + G 77 -12.4 -2.83409 | overlap 50709 50718 CCGCGATGTGGTATG TCGGCGCG ACC TGCGCCGA TCTGGTCGGTTACTG yaaU 50246 - 51577 + | putative transporter kefF 51685 - 52215 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 70 53187 - 53177 - g 75 -6.8 -4.42062 | opp_overlap 53176 53177 53180 CAGGTGCCAAATAAA CAGC GTC GCTG GTTTGCGGTGTTGTT kefC 52208 - 54070 + | potassium:proton antiporter folA 54262 - 54741 + | dihydrofolate reductase TERM 71 54765 - 54799 + T 85 -12.1 -3.322 | opp_overlap 54758 54755, overlap 54766 AGAATTTACGGCTAG TGCCGGATGCGACGC CGGTC GCGTCTTATCCGGCC TTCCTGTATCAGGCT TERM 72 54766 - 54798 + T 93 -15.6 -2.58999 | opp_overlap 54758 54755, overlap 54765 GAATTTACGGCTAGT GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC CTTCCTGTATCAGGC apaH 55661 - 54819 - | diadenosine tetraphosphatase apaG 56045 - 55668 - | protein associated with Co2+ and Mg2+ efflux TERM 73 55756 - 55777 + g 72 -8.7 -3.71527 | gap 1, overlap 55769 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 74 55847 - 55829 - G 76 -11 -3.30124 | opp_overlap 55829 55815 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 56869 - 56048 - | S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase pdxA 57855 - 56866 - | 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent TERM 75 57721 - 57704 - G 73 -9.1 -3.57263 | opp_overlap 57704 AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TTGGTAAGGAGAGTG surA 59141 - 57855 - | peptidyl-prolyl cis-trans isomerase (PPIase) imp 61548 - 59194 - | exported protein required for envelope biosynthesis and integrity TERM 76 61046 - 61069 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 61036 61046, overlap 61036 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCGCCACGTTGT TERM 77 61938 - 61924 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 78 61941 - 61961 + G 74 -3.1 -5.00884 | opp_overlap 61943, overlap 61949 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 61803 - 62618 + | DnaJ-like protein, membrane anchored TERM 79 62657 - 62676 + F 91 -11.4 -3.90744 | opp_overlap 62656 62657 TGCCCACGATTAAAG GTGGCCGC CCTG GCGGTCAC TTCTTTGAGAAAAGG ECUMN_0058 62913 - 63644 + | hypothetical protein TERM 80 63684 - 63645 - T 100 -25.3 -3.83226 | AATGATCCAGAATAA GCTAAGGTTGAAGGGGC TGGAAC GCCCCTTCAACCTTAGC AGTAGCGTGGGATGA TERM 81 63984 - 63999 + T 82 -10.4 -4.03234 | opp_overlap 63984 GGCAGAAACAAAAAA TCCCCG GACT CGGGGA TTTATGTACAAGAGG TERM 82 63999 - 63984 - T 100 -10.4 -5.72622 | opp_overlap 63984 GGCAGAAACAAAAAA TCCCCG GACT CGGGGA TTTATGTACAAGAGG rluA 64711 - 64052 - | pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) TERM 83 64444 - 64480 + g 72 -8.6 -3.72576 | gap 1, overlap 64446 GCTTTTTTGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC TERM 84 64671 - 64647 - G 95 -13.7 -3.29273 | opp_overlap 64669, overlap 64645 64669 TTGACCACCATAATA TGGTCATCCTG ATA CAGGATAACCA ACCAGGGTTCCTGCG hepA 67629 - 64723 - | RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) TERM 85 64772 - 64784 + g 76 -9.1 -3.77219 | TCCAGACGCCAGCCT GCCTG ATC CAGGC TTTCCATTACCTGCT polB 70144 - 67793 - | DNA polymerase II TERM 86 67859 - 67848 - G 77 -5.8 -4.64676 | overlap 67849 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 87 68949 - 68914 - G 74 -7.5 -4.06904 | overlap 68939 GTACCGAATCATAAA GCCCTGGCCGCGA ATCCATCACA TAGCCGCCAGGGC TGGCGTGTGGCGGCA TERM 88 69954 - 69905 - G 71 -10.7 -2.89602 | gap 1, overlap 69904 69913 GGCGCGACAGTAAAG GCCATACACCGGCTGGCGGTGAAA ATC TTTTAACGCCAGC-GGCGTCAGGC GAAAGCCTTGTTCAC TERM 89 70185 - 70165 - R 100 -8.3 -5.52096 | opp_overlap 70165 AAATCCAATAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC TERM 90 70165 - 70185 + r 78 -8.3 -4.14598 | opp_overlap 70165 AAATCCAATAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC araD 70914 - 70219 - | L-ribulose-5-phosphate 4-epimerase TERM 91 70996 - 71024 + r 81 -9.5 -3.9941 | opp_overlap 70984, overlap 70997 TAAGACGCGCCAGCA TCGCATCAGGCGT TGA ATGCCGGATGCGC TTTGCTTATCCGGCC TERM 92 70997 - 71023 + r 86 -13 -2.99325 | overlap 70996 AAGACGCGCCAGCAT CGCATCAGGCGT TGA ATGCCGGATGCG CTTTGCTTATCCGGC TERM 93 71059 - 71092 + r 71 -9.5 -3.05816 | opp_overlap 71069 71071 71072, overlap 71081 71082 AAATCGCAGCGTGTA GGCCTGATAAGACGC GCCA GCGTCGCATCAGGCG TTGAATGCCGGATGC TERM 94 71081 - 71109 + r 81 -9.5 -3.9941 | opp_overlap 71069 71072 71071, overlap 71059 71082 TAAGACGCGCCAGCG TCGCATCAGGCGT TGA ATGCCGGATGCGC TTTGCTTATCCGGCC TERM 95 71082 - 71108 + r 86 -13 -2.99325 | opp_overlap 71072 71071, overlap 71059 71081 AAGACGCGCCAGCGT CGCATCAGGCGT TGA ATGCCGGATGCG CTTTGCTTATCCGGC TERM 96 71144 - 71177 + r 71 -9.5 -3.08464 | opp_overlap 71154 71156 71157, overlap 71165 AAATCGCAGCGTGTA GGCCTGATAAGACGC GCCA GCGTCGCATCAGGCG TTACATACCTGATGC araA 72701 - 71199 - | L-arabinose isomerase araB 74412 - 72712 - | L-ribulokinase TERM 97 73027 - 73051 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTAACGGCGATC TERM 98 73774 - 73751 - G 70 -5.3 -4.41616 | gap 2, opp_overlap 73754, overlap 73753 AGTTCGTCAAAGAAA CTGGCTGGCGG CAGG CCGCC--CCAG CTTTCGTGCCATAGC TERM 99 74521 - 74507 - H 83 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGC ATAGCA AAGTGTGACGCCGTG araC 74751 - 75629 + | DNA-binding transcriptional dual regulator TERM 100 76253 - 76272 + G 76 -4.2 -4.92314 | overlap 76255 GCGAGTTTAAATGGT TGCTGCTG GCGA CGGCGGTA TTTTTGTGGGTTGGT yabI 75715 - 76479 + | conserved hypothetical protein; putative inner membrane protein thiQ 77291 - 76593 - | thiamin transporter subunit ; ATP-binding component of ABC superfamily thiP 78885 - 77275 - | fused thiamin transporter subunits of ABC superfamily: membrane components TERM 101 77365 - 77353 - G 78 -10.5 -3.48036 | TAGCAGCAGAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA tbpA 79844 - 78861 - | thiamin transporter subunit ; periplasmic-binding component of ABC superfamily TERM 102 79708 - 79718 + g 85 -3.2 -5.42259 | TCGCAATTACAGTCG GCTT CAA AGGC TTTTTTTACCACTGG ECUMN_0070 80112 - 79888 - | hypothetical protein TERM 103 80676 - 80660 - g 73 -9.3 -3.65314 | opp_overlap 80659 80660 80675 TGCAATTGGGAATAA GCCCCAG TAC CGGGGGC ATTGATCTGAGTAAT ECUMN_0071 80215 - 81051 + | hypothetical protein TERM 104 81070 - 81091 + T 87 -8 -5.17576 | opp_overlap 81069 81073 AGAATAATAAATAGG GAAGGGGC AGGAAC GCCCTTTC TTTTTTAAGTTGGTG TERM 105 81337 - 81368 + T 74 -7.3 -4.17316 | overlap 81341 81360 GCAAAAGAAATTTGA GTTGGAGTCTGGA GTCGAA TCCAGACTCTGCC TTGTTTTCAGGGAGT TERM 106 81341 - 81364 + T 74 -11.1 -2.75865 | overlap 81337 81360 AAGAAATTTGAGTTG GAGTCTGGA GTCGAA TCCAGACTC TGCCTTGTTTTCAGG sgrR 83227 - 81548 - | DNA-binding transcriptional regulator TERM 107 82677 - 82665 - G 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGAAATTTGCTGCC TERM 108 83471 - 83493 + r 100 -10.6 -5.93252 | GGTGTTAATCGCCAC GCCAGCAG TGATTAT CTGCTGGC TTTTTTCTTTTTGGC leuD 84139 - 83534 - | 3-isopropylmalate isomerase subunit TERM 109 83970 - 83980 + g 72 -4.6 -4.72272 | ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCCAGAAA leuC 85550 - 84150 - | 3-isopropylmalate isomerase subunit, dehydratase component TERM 110 85069 - 85081 + g 76 -9.1 -3.75629 | overlap 85056 85053 ATGGTCTTCGCACGA CCCTG TTT CAGGG TTTGCGTTGCCAGTA leuB 86644 - 85553 - | 3-isopropylmalate dehydrogenase leuA 88215 - 86644 - | 2-isopropylmalate synthase TERM 111 87349 - 87360 + g 72 -5.8 -4.41616 | TGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 112 88283 - 88266 - R 100 -14.1 -5.60993 | opp_overlap 88266 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG TERM 113 88266 - 88283 + r 100 -14.1 -5.65927 | opp_overlap 88266 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG leuL 88394 - 88308 - | leu operon leader peptide leuO 89053 - 89997 + | DNA-binding transcriptional activator TERM 114 90003 - 90042 + F 100 -13.8 -5.49234 | opp_overlap 90003, overlap 90036 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TTAA TGTCTGGTTTGTTCTGCA TTTTTTATTGAATGT TERM 115 90161 - 90177 + F 73 -5.1 -4.68612 | opp_overlap 90161 TTATTATCAATTTAA TCCTCTG TAA TGGAGGA TTTTATCGTTTCTTT TERM 116 90274 - 90286 + F 83 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCGTCAAAC TERM 117 91628 - 91618 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 90315 - 92039 + | acetolactate synthase III, large subunit ilvH 92042 - 92533 + | acetolactate synthase III, thiamin-dependent, small subunit TERM 118 92559 - 92579 + F 100 -9.7 -5.41143 | AATGCGCAATTTGCA GCCCAACAT GTC ACGTTGGGC TTTTTTTGCGAAATC TERM 119 92625 - 92615 - f 71 -4.6 -4.65747 | GAACCTGGAATAAAA GCAG TTG CCGC AGTTAATTTTCTGCG fruR 92713 - 93717 + | DNA-binding transcriptional dual regulator TERM 120 93763 - 93732 - f 74 -3.6 -5.06816 | gap 1, opp_overlap 93734, overlap 93718 93734 AGCCGCGAACAAAAA TACGCGTCAG-GTGA ATT TCTCTCTGGCGCGTT GAGTACGGGAATGGA TERM 121 93761 - 93734 - f 70 -6.2 -4.16307 | gap 1, opp_overlap 93734, overlap 93718 93732 CCGCGAACAAAAATA CGCGTCAG-GTGA ATT TCTCTCTGGCGCG TTGAGTACGGGAATG mraZ 94319 - 94777 + | hypothetical protein TERM 122 95018 - 95046 + G 76 -12.4 -2.52623 | overlap 95017 CCACGGACCTTTCTC CGCGCTGGGCGA ATATG TTGCCGAGCGCG ATCTTATCGGCAAGA TERM 123 95112 - 95123 + G 70 -3.6 -4.61873 | CCGCAACTTGATGAT GCTG AACG CGGC TTTTCCTTTATGCGC mraW 94779 - 95720 + | S-adenosyl-dependent methyltransferase activity on membrane-located substrates TERM 124 96041 - 96028 - g 76 -8.1 -4.18494 | opp_overlap 96027 96025 GATCGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 95717 - 96082 + | membrane bound cell division protein at septum containing leucine zipper motif TERM 125 96145 - 96165 + G 78 -7.6 -4.37734 | opp_overlap 96145 96143 96146, overlap 96146 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 126 97664 - 97685 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 97633, overlap 97667 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 127 97667 - 97682 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 97633, overlap 97664 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 128 97723 - 97741 + G 73 -11.6 -2.67171 | opp_overlap 97720 97717, overlap 97720 97722 97721 97737 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 96098 - 97864 + | transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) TERM 129 98962 - 98952 - g 81 -6.8 -4.62783 | overlap 98953 GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGCCTGCACTG murE 97851 - 99338 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase TERM 130 99775 - 99736 - g 75 -11.4 -3.07443 | opp_overlap 99744, overlap 99745 TTATACGGCAGGCAA TCTCAACAACGACATCGG TGTA CCGATGACGCTGTTGCGC TTAACGCCGGAATAC TERM 131 99766 - 99745 - g 77 -10.1 -3.6849 | opp_overlap 99744, overlap 99736 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG CTGTTGCGCTTAACG TERM 132 100533 - 100515 - g 70 -5.2 -4.41348 | overlap 100519 GCGTGGGTAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 99335 - 100693 + | UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase TERM 133 101280 - 101302 + G 74 -9.9 -3.5241 | gap 1, overlap 101278 GACTGATGGTCTCGA CGGTCTGGCA ATTA TGCC-GACCG TATTTGTCGCCGGTG mraY 100687 - 101769 + | phospho-N-acetylmuramoyl-pentapeptide transferase TERM 134 101809 - 101826 + G 70 -6.2 -4.20783 | ATGTCGTCATTATCG GCCTGG GCCTCA CCGGGC TTTCTTGCGTGGACT TERM 135 101851 - 101871 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA TERM 136 102399 - 102386 - g 72 -6.7 -4.2828 | opp_overlap 102386, overlap 102370 GCGCATTTACGAAAA CGCAA AAAT TTGCG TGGTTAATGCTGATG murD 101772 - 103088 + | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase ftsW 103088 - 104332 + | integral membrane protein involved in stabilizing FstZ ring during cell division TERM 137 104837 - 104852 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 104329 - 105396 + | N-acetylglucosaminyl transferase murC 105450 - 106925 + | UDP-N-acetylmuramate:L-alanine ligase ddlB 106918 - 107838 + | D-alanine:D-alanine ligase ftsQ 107840 - 108670 + | membrane anchored protein involved in growth of wall at septum ftsA 108667 - 109929 + | ATP-binding cell division protein involved in recruitment of FtsK to Z ring ftsZ 109990 - 111141 + | GTP-binding tubulin-like cell division protein TERM 138 112086 - 112076 - g 70 -6.8 -4.07568 | GCTGTCCTTGCAAAA CAGG AAG CCTG GGAATATGTGACCTT lpxC 111242 - 112159 + | UDP-3-O-acyl N-acetylglucosamine deacetylase TERM 139 112186 - 112229 + F 100 -4.5 -6.17292 | opp_overlap 112186 112198 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT secM 112390 - 112902 + | regulator of secA translation TERM 140 114080 - 114070 - g 77 -6.8 -4.50058 | overlap 114071 114073 GATCCAGAACGAAAA CCAG ACG CTGG CGTCGATCACCTTCC TERM 141 114739 - 114752 + G 75 -4.5 -4.8622 | opp_overlap 114739 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC secA 112964 - 115669 + | preprotein translocase subunit, ATPase TERM 142 115691 - 115708 + F 100 -12.7 -5.33866 | opp_overlap 115691 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 143 115708 - 115691 - f 100 -12.7 -4.42639 | opp_overlap 115691 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 144 115956 - 115939 - g 70 -4.1 -4.62069 | overlap 115941 TCGCTATTTGAAAAA CTGGAAT ATGA ATTCCCG GACAGGCATATAACT mutT 115729 - 116127 + | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP TERM 145 116211 - 116158 - T 100 -16 -3.33315 | opp_overlap 116167 116168 116170, overlap 116160 CCAACATTTGCACAA GATGCCCGATGCGACGCTGGCGCG TCTTAT CAGGCCAGCGTCGCATCAGACAAA ATGTCACTGCTTTGG TERM 146 116209 - 116160 - T 100 -23 -3.23219 | opp_overlap 116167 116168 116170, overlap 116158 AACATTTGCACAAGA TGCCCGATGCGACGCTGGCGCG TCTTAT CAGGCCAGCGTCGCATCAGACA AAATGTCACTGCTTT yacF 117165 - 116422 - | hypothetical protein TERM 147 116777 - 116767 - G 70 -6.8 -4.10672 | TGAAGGTAAATCAAA GCTG CAA CAGC CGCCTGGGATGCTCA TERM 148 116847 - 116877 + g 72 -6.8 -4.21462 | GAAATTGCCCGATAC GCGGCGCGGA AATTAATACGC TCCCCGCCGC TTTTAACTGCTGAAT coaE 117785 - 117165 - | dephospho-CoA kinase TERM 149 117489 - 117540 + g 74 -2.3 -5.0916 | gap 2, opp_overlap 117515 AGTTGCTTGCTGGAT CTGGTGTTGCGTCTCTTGCTGAATC AGCG GATGCAGCA-GGG-CGTTAAGCCAG TTTTTCTCTTCCGGG TERM 150 117758 - 117723 - G 76 -9 -3.81951 | overlap 117724 TCCGAGATCAGCAAA CGCATTGGCAACGGTA CTCT TGCCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 151 117757 - 117724 - G 78 -12.5 -2.88849 | overlap 117723 CCGAGATCAGCAAAC GCATTGGCAACGGTA CTCT TGCCACTGCCAATGC CTCCCGTTAAGGCAA guaC 118010 - 119053 + | GMP reductase TERM 152 119062 - 119087 + T 100 -16.2 -3.36671 | CCTGTAATCTCCCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATTCCACT hofC 120290 - 119088 - | assembly protein in type IV pilin biogenesis, transmembrane protein hofB 121665 - 120280 - | putative protein transport with triphosphate hydrolase domain TERM 153 120374 - 120398 + g 71 -9.2 -3.55622 | opp_overlap 120371 TTTTCAAAAAGCGTA CGCATACCCG CCTGT CGGGCGTGCG TTTCCAGCGATTCAA ppdD 122115 - 121675 - | putative major pilin subunit TERM 154 122068 - 122055 - G 70 -6.7 -4.08692 | CAATGGCGCTTAAAA TGGCA ATGA TGCCA ATAACCACCATCAGT nadC 123211 - 122318 - | quinolinate phosphoribosyltransferase TERM 155 122583 - 122605 + g 93 -9.8 -4.57073 | TCGACTTCTACTGGC GCATCCGGGT GCA GCCAGGATGC TTTTTCGACCGCCTG ampD 123299 - 123850 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 123847 - 124701 + | conserved hypothetical protein; putative inner membrane protein TERM 156 124736 - 124708 - T 72 -10.2 -2.84325 | overlap 124705 TTGGTGTAAAGATTA TTGCCCTCACCC TGCAC GGGTGAGGGCGT AGAGAGATTAATGCG aroP 126117 - 124744 - | aromatic amino acid transporter TERM 157 125910 - 125875 - G 74 -7.6 -4.00868 | gap 1, opp_overlap 125888, overlap 125884 GTATTTATAAGCAAA GTGGCTAAAGGAGCCTG CGA CAGGTTCCTCGA-CCAC CATTTCACCTAGCTG pdhR 126658 - 127422 + | DNA-binding transcriptional dual regulator TERM 158 127546 - 127492 - f 70 -7.3 -3.90291 | gap 1, opp_overlap 127513, overlap 127493 127496 127499 AGCGCGGCAACTAAA CGTAGAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTCCA-G AAAACTCAACGTTAT TERM 159 127543 - 127496 - f 77 -11.4 -2.70979 | opp_overlap 127513, overlap 127492 127493 127499 CGGCAACTAAACGTA GAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 160 127802 - 127790 - g 78 -9.1 -3.9461 | opp_overlap 127789 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG aceE 127583 - 130246 + | pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding aceF 130261 - 132153 + | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 TERM 161 132181 - 132160 - f 93 -11.5 -4.43477 | opp_overlap 132162, overlap 132162 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 162 132162 - 132179 + F 100 -14.1 -5.32882 | opp_overlap 132160 132162 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 163 132179 - 132162 - f 100 -14.1 -3.82321 | opp_overlap 132162, overlap 132160 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 164 133225 - 133197 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TGGACGACCGTGGTT lpd 132361 - 133785 + | lipoamide dehydrogenase, E3 component is part of three enzyme complexes TERM 165 133820 - 133786 - T 77 -9.4 -3.62255 | opp_overlap 133776 133808 GCGAAGAAGAAGTAA TTTTTCGTTTGCCGGA ACA TCCGGCAATTAAAAAA GCGGCTAACCACGCC TERM 166 133837 - 133821 - T 87 -6.5 -5.26875 | opp_overlap 133808 133821 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGCCTGC TERM 167 133821 - 133837 + T 91 -6.5 -5.42259 | opp_overlap 133821, overlap 133808 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGCCTGC yacH 135709 - 133856 - | hypothetical protein TERM 168 134008 - 133993 - G 70 -4.7 -4.56597 | CTTTCTTCCGAAAAA CCTGA CGTTGC TCAGG TGATGCTGATTGAAC TERM 169 134054 - 134074 + g 73 -3.9 -4.8622 | overlap 134057 ATCACGTTGCTGTTG GTTCAGTGG GCG CTGCTGTAC TTTTTCCTTAAACAC TERM 170 135839 - 135827 - H 72 -7.7 -3.86346 | GGATTCGTTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 171 136182 - 136171 - g 77 -7.2 -4.57837 | overlap 136172 136173 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT acnB 136064 - 138661 + | bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase TERM 172 138716 - 138749 + F 100 -14.8 -5.23396 | opp_overlap 138720 CAAGTAACACTTCTT TAAACCCCCTTTCT GCTCAA GGAAAGGGGGTTTA TTTTTATTCCTTATT TERM 173 138745 - 138720 - f 77 -10.5 -3.55548 | opp_overlap 138716 TAACACTTCTTTAAA CCCCCTTTC TGCTCAAG GAAAGGGGG TTTATTTTTATTCCT yacL 138858 - 139220 + | hypothetical protein TERM 174 139253 - 139226 - T 100 -17.8 -4.59982 | GCAGAAGTAAATAAA TCTGGCGGAGCC TGGG AGCTCCGCCAGA GCCGTTAAACAGCTG speD 140052 - 139258 - | S-adenosylmethionine decarboxylase speE 140934 - 140068 - | spermidine synthase (putrescine aminopropyltransferase) TERM 175 141016 - 140991 - RH 74 -10.5 -3.24255 | opp_overlap 140991 140993, overlap 140984 140993 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 176 141014 - 140993 - RH 78 -10.9 -3.17362 | opp_overlap 140991 140993, overlap 140991 140984 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG TERM 177 140993 - 141014 + rH 71 -8.7 -3.51934 | opp_overlap 140993 140991 140984, overlap 140991 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 141558 - 141040 - | hypothetical protein TERM 178 141507 - 141517 + gH 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCACCTGC TERM 179 142938 - 142926 - gR 70 -5.5 -4.3739 | overlap 142933 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGACTCATCGCGCG cueO 141553 - 143103 + | multicopper oxidase (laccase) TERM 180 143145 - 143122 - TR 83 -11 -3.57462 | opp_overlap 143124, overlap 143124 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTACTTCACAT TERM 181 143124 - 143143 + Tr 100 -13.6 -3.56727 | opp_overlap 143122 143124 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC TERM 182 143143 - 143124 - TR 100 -13.6 -3.36515 | opp_overlap 143124, overlap 143122 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC gcd 145540 - 143150 - | glucose dehydrogenase hpt 145746 - 146282 + | hypoxanthine phosphoribosyltransferase TERM 183 146286 - 146319 + T 81 -3.1 -5.4182 | gap 1, overlap 146289 146290 CTGGACGAGTAAGTG TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA TTTTTATTTGTGGTT can 146985 - 146323 - | carbonic anhydrase TERM 184 147608 - 147624 + G 70 -3.5 -4.60924 | TGGATATCGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA yadG 147094 - 148020 + | putative transporter subunit: ATP-binding component of ABC superfamily yadH 148017 - 148787 + | putative transporter subunit: membrane component of ABC superfamily TERM 185 148794 - 148823 + F 80 -9.3 -4.10657 | overlap 148795 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT TGGGGGAGAGGAG TTTTGACGGCTATCA TERM 186 148795 - 148822 + F 76 -10.6 -3.06073 | overlap 148794 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT TGGGGGAGAGGA GTTTTGACGGCTATC yadI 148892 - 149332 + | putative PTS Enzyme IIA yadE 149396 - 150625 + | putative exported polysaccharide deacetylase panD 151009 - 150629 - | aspartate 1-decarboxylase TERM 187 151042 - 151056 + H 85 -11.4 -3.56099 | opp_overlap 151042 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 188 151056 - 151042 - H 83 -11.4 -3.33696 | opp_overlap 151042 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC yadD 151283 - 152227 + | putative transposase TERM 189 152588 - 152558 - T 85 -12 -3.37499 | opp_overlap 152561, overlap 152561 TAACATGGCAATGAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AGTATTACACCAGCT TERM 190 152585 - 152561 - T 77 -9.3 -3.8186 | opp_overlap 152561, overlap 152558 CATGGCAATGAATAA CTGGCGCCA TCAGCCG TAGCGCCAG TTAAGTATTACACCA panC 153444 - 152593 - | pantothenate synthetase panB 154250 - 153456 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 191 154357 - 154325 - R 83 -12 -3.20435 | opp_overlap 154323, overlap 154330 GCAATGATTTATCAA TTACAGCACCGCCA GATGA TGGCGGTGCGGTTA AACCTGTTACTCGTA TERM 192 154352 - 154330 - R 89 -14.9 -2.94199 | opp_overlap 154323, overlap 154325 GATTTATCAATTACA GCACCGCCA GATGA TGGCGGTGC GGTTAAACCTGTTAC ECUMN_0133 155614 - 154364 - | conserved hypothetical protein; putative exported protein ECUMN_0134 156265 - 155666 - | conserved hypothetical protein, putative fimbrial protein ECUMN_0135 156839 - 156279 - | conserved hypothetical protein; putative exported protein, putative adhesin ECUMN_0136 159533 - 156858 - | Outer membrane usher protein htrE precursor (Heat shock protein E) TERM 193 156956 - 156979 + gr 71 -2.4 -4.91511 | gap 1, overlap 156957 156960 156961 CAATACAGGTTTTGG GCATGCTGGCT TCC AGCCAG-GTGA TTTTTATCGTGCCCT TERM 194 156961 - 156975 + gr 70 -10 -2.59738 | overlap 156960 156957 156956 CAGGTTTTGGGCATG CTGGCT TCC AGCCAG GTGATTTTTATCGTG TERM 195 158627 - 158647 + gr 72 -10.4 -2.87564 | opp_overlap 158626 158624 AGTTTGCCAATACAG GCGGCAGC ATTCG GCTGTCGC TGTATAAGCGAATGC ECUMN_0137 160224 - 159493 - | Chaperone protein ecpD precursor TERM 196 160090 - 160103 + gr 84 -3.8 -5.19261 | GCCTTTATTCTCCAG GCGT ACGCTA ACGC TTTTTTGATCACTTT TERM 197 160289 - 160259 - R 93 -15.5 -3.02461 | opp_overlap 160253 160262, overlap 160262 GAATTGTTTTCAAGA CAAGGGGGCGACA ATAGG TGTCGCACCCTTG TAGTAATTTAAATCA TERM 198 160286 - 160262 - R 87 -11.4 -3.65812 | opp_overlap 160253 160262, overlap 160259 TTGTTTTCAAGACAA GGGGGCGACA ATAGG TGTCGCACCC TTGTAGTAATTTAAA TERM 199 160262 - 160286 + r 85 -11.4 -3.49924 | opp_overlap 160262 160259, overlap 160253 TTGTTTTCAAGACAA GGGGGCGACA ATAGG TGTCGCACCC TTGTAGTAATTTAAA ECUMN_0138 160913 - 160317 - | conserved hypothetical protein; putative exported protein, putative fimbrial protein folK 161717 - 161238 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 163132 - 161714 - | poly(A) polymerase I yadB 164097 - 163171 - | glutamyl-Q tRNA(Asp) synthetase TERM 200 163221 - 163237 + g 70 -4.4 -4.58395 | gap 1, overlap 163220 163225 TTGCCGACTCAGGCA CT-GCGG TGAG CCGCCAG TTTTTGACGGCTGAC TERM 201 163459 - 163449 - G 81 -6.8 -4.65895 | CTTTCCAGCCAAAAA GCTG GTA CAGC GAGATTTGCCGCACT TERM 202 164108 - 164084 - G 91 -5.6 -5.4505 | opp_overlap 164087, overlap 164087 TCGTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 203 164105 - 164087 - G 100 -11.7 -4.81306 | opp_overlap 164087, overlap 164084 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT TERM 204 164087 - 164105 + g 77 -12.4 -2.79302 | opp_overlap 164087 164084 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT dksA 164589 - 164134 - | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein sfsA 165471 - 164767 - | putative regulator TERM 205 165429 - 165419 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC ligT 166016 - 165486 - | 2'-5' RNA ligase TERM 206 165735 - 165723 - G 74 -10.5 -3.15544 | CGCCAGCTGGATTAA GCCGC GTG GCGGC TGACGCATCCCTAAC TERM 207 165854 - 165833 - G 70 -7.3 -4.07568 | opp_overlap 165833 165839, overlap 165839 TCCGCCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC GGCGCTCACTTCGCC TERM 208 167395 - 167411 + G 81 -12.3 -3.21276 | opp_overlap 167386 167407, overlap 167393 GACGAAGCTGCTACC GCGGCAA AAA TTGCCGC TATTCTCGAAGAGCC hrpB 166090 - 168519 + | ATP-dependent (RNA) helicase TERM 209 169983 - 169969 - g 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAG mrcB 168613 - 171147 + | fused glycosyl transferase ; transpeptidase TERM 210 171187 - 171165 - f 89 -14.9 -2.89742 | TCTAAGCGTGACATA CCGGATGGC GAGTA GCCATCCGG TAAAATAACATCCCA TERM 211 171272 - 171291 + F 75 -9.2 -3.68662 | GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT fhuA 171367 - 173625 + | ferrichrome outer membrane transporter TERM 212 173636 - 173657 + F 87 -11.5 -3.5774 | overlap 173637 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCG TTTCACAAGTTGGCT TERM 213 173637 - 173656 + F 89 -15 -2.74322 | overlap 173636 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC GTTTCACAAGTTGGC fhuC 173676 - 174473 + | iron-hydroxamate transporter subunit ; ATP-binding component of ABC superfamily TERM 214 174496 - 174524 + G 88 -11 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGTCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 174473 - 175363 + | iron-hydroxamate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 215 175502 - 175516 + G 72 -4.3 -4.66163 | CGCCGGATATTGACG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 175360 - 177342 + | fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components TERM 216 177370 - 177348 - T 100 -19.2 -3.17392 | GAGCCGTTAATTGAA TGCCTCGCCC GGT GGGCGAGGCA AAATCATCACAACTT hemL 178657 - 177377 - | glutamate-1-semialdehyde aminotransferase (aminomutase) TERM 217 177526 - 177516 - G 72 -6.8 -4.23615 | overlap 177512 ATCATATGGAAGAAA CGCT TAA AGCG TTCCACGTCACAGGC TERM 218 178934 - 178910 - g 88 -11.4 -3.85698 | overlap 178913 CTCCCTCTTTAGAAA CACCGCAGGC CGCGC GCCTGCGACG CAGACAACTGATTCG TERM 219 178931 - 178913 - g 73 -11.7 -2.70946 | overlap 178910 CCTCTTTAGAAACAC CGCAGGC CGCGC GCCTGCG ACGCAGACAACTGAT TERM 220 179457 - 179468 + G 72 -7.2 -4.18024 | overlap 179453 TGCGGCCTTTAACGC CCCG CTGG CGGG TATTTTGTTTATTAT clcA 178882 - 180303 + | chloride channel, voltage-gated TERM 221 180591 - 180577 - g 75 -5.6 -4.68994 | opp_overlap 180577 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 180385 - 180729 + | putative chaperone involved in Fe-S cluster assembly and activation; hesB-like TERM 222 180739 - 180767 + T 100 -14.7 -3.68024 | overlap 180741 ATCTAATCTGTTGTT CATGTGCCGGATA AAC TATCCGGCACATC TTCTCTCTTCAACGC TERM 223 180741 - 180765 + T 100 -17.3 -3.41962 | overlap 180739 CTAATCTGTTGTTCA TGTGCCGGATA AAC TATCCGGCACA TCTTCTCTCTTCAAC yadS 181399 - 180776 - | conserved hypothetical protein; putative inner membrane protein btuF 182237 - 181437 - | vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily TERM 224 182222 - 182200 - G 72 -4.7 -4.63486 | overlap 182202 AGTGGCGCAAGAAAA GACAGGGCG ACCAG CGCCCTGAA CAGTGACTTAGCCAT TERM 225 182220 - 182202 - G 90 -11.7 -3.93367 | overlap 182200 TGGCGCAAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGACTTAGCC pfs 182928 - 182230 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 183012 - 184529 + | deoxyguanosine triphosphate triphosphohydrolase TERM 226 184990 - 185010 + G 70 -11.1 -2.78216 | opp_overlap 184990 184987, overlap 184987 AGCAACAGAAATTCA TGGCGCTGG GTT CCGGCGTCA TCATTGATGCCGATA degP 184659 - 186083 + | serine endoprotease (protease Do), membrane-associated TERM 227 186094 - 186117 + F 100 -14.6 -3.52093 | AGTAATCTCCCTCAA CCCCTTCCTG AATA CGGGAAGGGG TTCTCCTTACAATCT TERM 228 187004 - 187025 + G 72 -10.1 -3.40403 | overlap 187007 GTAACTATTTTACCG GACCGGGCA GTAT TGCCCGCTC TTATCGTACGGCGAA cdaR 186238 - 187395 + | DNA-binding transcriptional activator TERM 229 187435 - 187414 - T 74 -10.1 -3.15658 | overlap 187412 187410 GATTACAAAATTACA GCCGGGTGA GACT TTACCCGGC CCACAGAATGGCATT yaeH 187835 - 187449 - | hypothetical protein TERM 230 187707 - 187721 + g 75 -7.1 -4.40003 | AAACTTCACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA TERM 231 188107 - 188145 + r 84 -9.4 -4.28994 | opp_overlap 188097 188111 188116, overlap 188110 AATTATTCTGAACCA GAAAGCAATCGGGCAGCG TCG TGCTGCCCGTGTGCATAC TTTTAGTCGATGGTA TERM 232 188110 - 188142 + r 72 -9.7 -3.14218 | opp_overlap 188111 188116, overlap 188107 TATTCTGAACCAGAA AGCAATCGGGCAGCG TCG TGCTGCCCGTGTGCA TACTTTTAGTCGATG TERM 233 188141 - 188111 - R 100 -12.5 -4.05714 | opp_overlap 188110 188107, overlap 188116 ATTCTGAACCAGAAA GCAATCGGGCAGC GTCGT GCTGCCCGTGTGC ATACTTTTAGTCGAT TERM 234 188136 - 188116 - R 86 -14 -2.78526 | opp_overlap 188110 188107, overlap 188111 GAACCAGAAAGCAAT CGGGCAGC GTCGT GCTGCCCG TGTGCATACTTTTAG dapD 188972 - 188148 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 235 188489 - 188508 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATACCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC glnD 191675 - 189003 - | uridylyltransferase TERM 236 191715 - 191730 + r 88 -11.8 -3.4758 | opp_overlap 191715, overlap 191709 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC TERM 237 191730 - 191715 - R 100 -11.8 -5.15634 | opp_overlap 191715 191709 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC map 192531 - 191737 - | methionine aminopeptidase TERM 238 192481 - 192491 + g 74 -2.4 -5.15381 | overlap 192470 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 239 193309 - 193298 - g 72 -7.2 -4.24413 | overlap 193295 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 192899 - 193624 + | 30S ribosomal subunit protein S2 TERM 240 193617 - 193605 - f 76 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCTT TERM 241 193799 - 193819 + F 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 242 194054 - 194038 - g 77 -3 -5.13521 | gap 1, overlap 194039 194042 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 193882 - 194733 + | protein chain elongation factor EF-Ts TERM 243 194744 - 194765 + F 100 -13.7 -4.84761 | opp_overlap 194744 194747 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 244 194765 - 194744 - f 93 -11.5 -4.23892 | opp_overlap 194744, overlap 194747 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 245 194762 - 194747 - f 81 -11.8 -3.12324 | opp_overlap 194744, overlap 194744 AATTATCGAAAAGGA GCCGCC TGAG GGCGGC TTCTTTTTGTGCCCA pyrH 194880 - 195605 + | uridylate kinase frr 195897 - 196454 + | ribosome recycling factor TERM 246 196434 - 196454 + F 78 -8.3 -4.15044 | opp_overlap 196434 196435 196437, overlap 196435 196437 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 247 196454 - 196434 - f 78 -8.3 -4.14627 | opp_overlap 196434 196435 196437, overlap 196435 196437 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 248 196435 - 196453 + F 81 -11.8 -3.08812 | opp_overlap 196434 196435 196437, overlap 196434 196437 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 249 196453 - 196435 - f 81 -11.8 -3.08294 | opp_overlap 196435 196434 196437, overlap 196434 196437 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 250 196467 - 196515 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 196473, overlap 196468 196473 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 251 196468 - 196514 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 196473, overlap 196467 196473 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 252 196509 - 196473 - f 100 -13 -4.98255 | gap 1, opp_overlap 196473 196468 196467 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 253 196473 - 196509 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 196473, overlap 196468 196467 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC dxr 196546 - 197742 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 254 197847 - 197864 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG ispU 197928 - 198689 + | undecaprenyl pyrophosphate synthase cdsA 198702 - 199559 + | CDP-diglyceride synthase yaeL 199571 - 200923 + | zinc metallopeptidase TERM 255 201462 - 201451 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 256 202158 - 202190 + G 71 -10.5 -2.8547 | opp_overlap 202162, overlap 202162 TGTCGATACCGATAC CCAACGTGTTCCGGG TAG CCCGGACCAGGTTGA TGTAGTCTACAAGGT TERM 257 202162 - 202186 + G 72 -9.9 -3.31269 | opp_overlap 202162, overlap 202158 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAGG TTGATGTAGTCTACA TERM 258 202186 - 202162 - g 70 -9.9 -3.14026 | opp_overlap 202162 202158 GATACCGATACCCAA CGTGTTCCGGG TAG CCCGGACCAGG TTGATGTAGTCTACA yaeT 200953 - 203385 + | outer membrane protein assembly factor TERM 259 203484 - 203467 - f 72 -7.7 -3.96216 | overlap 203468 GGGCCACGCAAAGAA CTGCACC CTCC GGTGCAA ATGGGATGGTAAGGA TERM 260 203969 - 203941 - g 80 -11.8 -3.28712 | overlap 203927 203926 203957 CGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 203507 - 203992 + | periplasmic chaperone TERM 261 204074 - 204049 - g 82 -13.3 -2.97245 | opp_overlap 204047, overlap 204044 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 203996 - 205021 + | UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase TERM 262 205048 - 205085 + F 100 -12.7 -4.07515 | overlap 205050 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 263 205050 - 205083 + F 100 -13.1 -3.60967 | overlap 205048 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 205126 - 205581 + | (3R)-hydroxymyristol acyl carrier protein dehydratase lpxA 205585 - 206373 + | UDP-N-acetylglucosamine acetyltransferase TERM 264 206407 - 206428 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG lpxB 206373 - 207521 + | tetraacyldisaccharide-1-P synthase TERM 265 207685 - 207674 - g 81 -7.2 -4.67011 | opp_overlap 207673 AAGCTGAGCGAAAAA CGCC GTCT GGCG CTCTGTGAAGAGATC rnhB 207518 - 208114 + | ribonuclease HII, degrades RNA of DNA-RNA hybrids dnaE 208151 - 211633 + | DNA polymerase III alpha subunit TERM 266 211799 - 211785 - g 74 -2.8 -5.00616 | GTCTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 211646 - 212605 + | acetyl-CoA carboxylase, carboxytransferase, alpha subunit TERM 267 212643 - 212626 - f 79 -6.9 -4.61527 | opp_overlap 212626 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 268 212626 - 212643 + F 100 -9.1 -5.24129 | opp_overlap 212626 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 269 213700 - 213716 + G 76 -8 -4.27617 | CACTTCGATTCCGCC TGGGTG CCGTA CACCCA TTTTCATCCGATCTA ldcC 212704 - 214845 + | lysine decarboxylase 2, constitutive yaeR 214902 - 215291 + | putative S-C lyase TERM 270 215311 - 215331 + F 91 -13.3 -3.24925 | TGTCATCGCCGCATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT tilS 215356 - 216651 + | tRNA(Ile)-lysidine synthetase rof 216954 - 216700 - | modulator of Rho-dependent transcription termination yaeP 217147 - 216947 - | hypothetical protein TERM 271 216984 - 216997 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 272 217608 - 217595 - g 76 -8.1 -4.24342 | CGGCGGATTAAGAAA GCCTG CACC CAGGC CGCAGAAGTAGCGCT yaeQ 217313 - 217858 + | hypothetical protein yaeJ 217855 - 218277 + | hypothetical protein nlpE 218291 - 219001 + | lipoprotein involved with copper homeostasis and adhesion TERM 273 219031 - 219002 - T 95 -15.1 -3.14211 | opp_overlap 219008, overlap 219008 AGTTTGGGGCAGTAA TTGAAAGCCGGAG CATT CTCCGGCTTTCAT CACTGAGTCAGCCCA TERM 274 219008 - 219025 + T 100 -12.7 -3.767 | opp_overlap 219002 219008 GGGCAGTAATTGAAA GCCGGAG CATT CTCCGGC TTTCATCACTGAGTC TERM 275 219025 - 219008 - T 100 -12.7 -3.78329 | opp_overlap 219008, overlap 219002 GGGCAGTAATTGAAA GCCGGAG CATT CTCCGGC TTTCATCACTGAGTC yaeF 219855 - 219031 - | putative lipoprotein TERM 276 219487 - 219501 + g 76 -4.2 -5.00616 | GACGAAAAGCTTATC GCTATG CTT CATCGC TTTTTTGAGGGAAAC TERM 277 219898 - 219878 - R 100 -13.3 -5.10497 | opp_overlap 219864 219878 AAGCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC TERM 278 219878 - 219898 + r 86 -11.1 -3.89346 | opp_overlap 219878, overlap 219864 AAGCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 221626 - 219908 - | prolyl-tRNA synthetase TERM 279 220480 - 220505 + g 74 -11.1 -3.14564 | GGATATCAGCAATTT CTGGGGTAGCG ACAT CGCGATCCCAG TTGATGCCGAAGTAG TERM 280 221674 - 221656 - R 95 -13.2 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG TGAGCCTG GGACAAAAAAAGTGA yaeB 222444 - 221737 - | hypothetical protein TERM 281 222291 - 222316 + g 83 -12.6 -3.28924 | gap 1 AATGGCTGAACGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGGAGCAATG TERM 282 222341 - 222353 + g 70 -4.7 -4.57073 | overlap 222342 GCAATGAGATGCAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 222845 - 222441 - | conserved hypothetical protein; putative outer membrane protein, signal TERM 283 222709 - 222719 + g 74 -8.2 -3.92659 | overlap 222702 222713 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 284 222930 - 222902 - R 76 -6 -4.58663 | gap 1, opp_overlap 222903, overlap 222905 222908 AGGAGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 285 222928 - 222905 - R 95 -14.6 -3.23975 | opp_overlap 222903, overlap 222902 222908 AGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 286 222925 - 222908 - R 100 -12.7 -3.75505 | opp_overlap 222903, overlap 222905 222902 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 223778 - 222963 - | DL-methionine transporter subunit ; periplasmic-binding component of ABC superfamily metI 224471 - 223818 - | DL-methionine transporter subunit ; membrane component protein of ABC superfamily TERM 287 224411 - 224400 - G 79 -2.2 -5.24449 | CACAAACCCAAAAAA TCCG GATA CGAA GGTCATTGCCAGCGT metN 225495 - 224464 - | DL-methionine transporter subunit ; ATP-binding component of ABC superfamily TERM 288 224785 - 224795 + g 77 -8.2 -4.13767 | overlap 224793 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA gmhB 225683 - 226255 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 289 226408 - 226394 - f 76 -4.2 -5.0916 | opp_overlap 226394, overlap 226395 226402 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 290 226440 - 226428 - f 72 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 291 228487 - 228450 - f 100 -6.3 -5.68438 | opp_overlap 228452 228467, overlap 228452 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 292 228485 - 228452 - f 88 -8.9 -4.47052 | opp_overlap 228452 228467, overlap 228450 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 293 228452 - 228485 + F 77 -6.7 -4.49756 | opp_overlap 228452 228450, overlap 228467 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 294 228550 - 228526 - f 72 -8 -3.93061 | gap 1, opp_overlap 228533 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 295 229104 - 229092 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 296 230406 - 230395 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 297 231594 - 231573 - f 76 -8.7 -3.91196 | opp_overlap 231590 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTTGC TERM 298 231868 - 231887 + F 100 -10 -5.90981 | opp_overlap 231867 231868 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGAGG TTTTTTTTCGTCTGG TERM 299 232782 - 232753 - g 100 -10 -5.56264 | GCCAAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 232018 - 232821 + | 2,5-diketo-D-gluconate reductase B TERM 300 232832 - 232849 + T 100 -11.3 -4.68593 | ATTAAGCCTCTCTGA CAGCTCC TCCA GGAGCTG TTTTTACATGCTCGC yafC 233732 - 232818 - | putative DNA-binding transcriptional regulator TERM 301 233943 - 233924 - H 85 -11.4 -3.54771 | opp_overlap 233908, overlap 233907 CCTATAACAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTAATAGAGG TERM 302 234039 - 234015 - g 72 -9.9 -3.28924 | opp_overlap 234014 234010 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 303 234638 - 234661 + G 82 -3.1 -5.18371 | overlap 234632 234633 234636 234638 CGATGATCAGCGCCG TCGGGCG TTTGGCCGCC CGCTCGA TTTTGTTTTCTACCG yafD 233973 - 234773 + | hypothetical protein TERM 304 234794 - 234819 + F 89 -8.3 -4.72272 | gap 1, opp_overlap 234778, overlap 234779 234778 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGCCC TTTTTAATCAAACAA yafE 234850 - 235620 + | putative S-adenosyl-L-methionine-dependent methyltransferase TERM 305 235629 - 235649 + T 100 -10.4 -5.25699 | opp_overlap 235629 AGCATAAATAAAAAA GGCACCGG GGGAA TCGGTGCC TTTTTATTATCTGGT TERM 306 235649 - 235629 - T 100 -9.7 -5.73978 | opp_overlap 235629 AGCATAAATAAAAAA GGCACCG GGGGAAT CGGTGCC TTTTTATTATCTGGT mltD 237026 - 235668 - | membrane-bound lytic murein transglycosylase D TERM 307 236367 - 236404 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 236376, overlap 236376 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 308 236376 - 236396 + g 70 -4.6 -4.46669 | opp_overlap 236376, overlap 236367 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 237853 - 237098 - | putative hydroxyacylglutathione hydrolase TERM 309 237479 - 237467 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT yafS 237887 - 238609 + | putative S-adenosyl-L-methionine-dependent methyltransferase rnhA 239073 - 238606 - | ribonuclease HI, degrades RNA of DNA-RNA hybrids dnaQ 239138 - 239869 + | DNA polymerase III epsilon subunit TERM 310 240108 - 240130 + F 100 -9.2 -5.58209 | opp_overlap 240108 AATGAGTTCAGAGAA CCGCGAGATT TTT AATTTTGCGG TTTTTTTGCATTTAA TERM 311 240966 - 240956 - g 76 -4 -4.96762 | GACAGATTATAAAAA TCAA AAA TTGA CTGACACGATGTCAC yafT 240405 - 241190 + | putative aminopeptidase TERM 312 241229 - 241243 + T 72 -3.6 -4.89567 | overlap 241226 AGTGGTACTTAGCAG GAAAGA GCA TTTTTC TTTTCTGTTTTACAC TERM 313 241413 - 241452 + T 100 -14.6 -4.2408 | opp_overlap 241412 241409 241427, overlap 241408 TCTATAAAACAGCAG GTACGGTTAATTAAGAAT TTTT ATTCGTGATTAACCGTAC TTTGTCATTTTATCC ECUMN_0214 242009 - 241530 - | Conserved hypothetical protein Aec32 (Hcp-like) ECUMN_0215 243526 - 242027 - | Conserved hypothetical protein Aec31, putative ImpA-related N-termina domain TERM 314 242261 - 242291 + gr 85 -6.8 -4.77036 | opp_overlap 242261 242264 242266, overlap 242262 CACCGTCTTGATATA CGAGAGGGTGAAAC CCT GTTTCTCCGTCTCC TTTTTCATCATCAGA TERM 315 242262 - 242290 + gr 77 -10.3 -3.4574 | opp_overlap 242261 242264 242266, overlap 242261 ACCGTCTTGATATAC GAGAGGGTGAAAC CCT GTTTCTCCGTCTC CTTTTTCATCATCAG TERM 316 242652 - 242629 - GR 85 -13.2 -2.82516 | CCTGCCACCACCAGA GTACTGCCGC GATA ACGGCAGTAC AGGCGGCACCGGCAA TERM 317 242764 - 242793 + gr 100 -20.1 -3.53811 | overlap 242758 GGTCGGGCAGGGGAG GCACGGCTTCCGC TGTG GTGGAAGCCGTGC TTTCCGGCGCATAGA ECUMN_0216 246923 - 243396 - | Conserved hypothetical protein Aec30, putative macrophage toxin, IcmF-like protein TERM 318 245352 - 245341 - GR 77 -7.2 -4.38154 | overlap 245343 ATATCCGCCAGAAAA CCGC GATC GCGG TAATCGCCATAGGCC TERM 319 245888 - 245910 + gr 72 -10.5 -2.91593 | opp_overlap 245880 245888, overlap 245887 GGGAGAAGCTGAACA CGGCGCTGC GGGGA GCAGCACCG GTTTGTGCGAGCATC TERM 320 245910 - 245888 - GR 83 -12.7 -3.11291 | opp_overlap 245888 245887, overlap 245880 GGGAGAAGCTGAACA CGGCGCTGC GGGGA GCAGCACCG GTTTGTGCGAGCATC TERM 321 246036 - 246050 + gr 100 -7.8 -5.26316 | opp_overlap 246024, overlap 246024 AAACGTGACGCCGAG GATCGC ATC GCGGTC TTTTTTATCCAGTGA TERM 322 246606 - 246617 + gr 74 -2.2 -5.1356 | overlap 246585 246584 GCGGTGGAGTTCCAC GGTC AACG GATC TTTTTCTTCCTCCCG ECUMN_0217 248451 - 246943 - | conserved hypothetical protein Aec29, contains a TPR-like_helical domain TERM 323 247439 - 247451 + gr 81 -4.7 -5.03715 | TCCAGCCAGTACGGG GCCAG CAG CAGGC TTTTTTCCACCTGCT TERM 324 247647 - 247683 + gr 72 -8 -3.99592 | gap 1, opp_overlap 247650, overlap 247650 GCTGGCGCTCACAGA GAATGGCG-GCCACCTT CAGC AGGGTGTCGCGCCATGC TTTATCGTCGTGGCT ECUMN_0218 249133 - 248390 - | conserved hypothetical protein Aec28 TERM 325 248573 - 248549 - GR 83 -11.3 -3.3514 | opp_overlap 248547 248564 ATCGATACCGGATAA CCCCCGGCTGG ACT CCAGCAGGGTG CCGTTCTCGCGCACA ECUMN_0219 251862 - 249130 - | putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity TERM 326 249980 - 249952 - G 81 -10.1 -3.98214 | overlap 249953 ACCAGCCAGCAGAAA CGCGCCAAGCGGG CGT CCCGGACGGCGCA GGTCGGCGCGTGCGG TERM 327 249979 - 249953 - G 75 -11.4 -2.98447 | overlap 249952 CCAGCCAGCAGAAAC GCGCCAAGCGGG CGT CCCGGACGGCGC AGGTCGGCGCGTGCG ECUMN_0220 252645 - 251872 - | Putative membrane protein Aec26 TERM 328 252283 - 252294 + g 70 -4.4 -4.48823 | opp_overlap 252283 GTTATGGAAATGAAC CAGT AGCG ACTG TTTTATCCATTCGTT ECUMN_0221 253996 - 252650 - | conserved hypothetical protein Aec25 ECUMN_0222 254523 - 253999 - | conserved hypothetical protein Aec24; putative lipoprotein TERM 329 254339 - 254393 + g 79 -12.1 -3.10164 | gap 2, overlap 254341 ACCGGCGCGGCTTCA CCG-TCCG-CCGTCAGGTTGCTGTCCG GCT CGGTCAGCAGCGTGACGGTCAGCTCGG TTGACTGATCCATCA TERM 330 254341 - 254389 + g 76 -12.3 -2.55544 | overlap 254339 CGGCGCGGCTTCACC GTCCGCCGTCAGGTTGCTGTCCG GCT CGGTCAGCAGCGTGACGGTCAGC TCGGTTGACTGATCC ECUMN_0223 255908 - 254520 - | conserved hypothetical protein Aec23, contains FHA domain TERM 331 254676 - 254700 + gr 71 -9.9 -3.01712 | GGCGTTGTCCATTTT CTGGCGCAGCT CAT GGCTGCGGCGG TATTGCGCAAAGCGG TERM 332 255654 - 255612 - GR 77 -11.2 -2.57132 | overlap 255611 GTCGTGCCGGATAAC GGTACAGGCACGCGCAGCAA TGC TTCCCGCCCGGTCCTGTACC TGCCAGTGACATTCC ECUMN_0224 256866 - 255817 - | conserved hypothetical protein Aec22 TERM 333 256806 - 256821 + gr 100 -11.8 -4.46155 | TGCAGTTGCGCACAT CCGCCG ATAA CGGCGG TTTTGTCGCTATATA ECUMN_0225 258689 - 256830 - | conserved hypothetical protein Aec21 TERM 334 256955 - 256944 - GR 93 -5.8 -5.24989 | GTAGAGAGCAAAAAA GTGC GAGA GCAC TGTACCAAGAAGATA ECUMN_0226 259102 - 258677 - | conserved hypothetical protein Aec19 TERM 335 258907 - 258891 - G 86 -12.3 -3.53091 | opp_overlap 258886 258891 ATTTCTCGTCTGAAA TCGCTGG AGG CCAGCGA TTCATCATTTAAATC TERM 336 258891 - 258907 + g 83 -12.3 -3.33483 | opp_overlap 258891, overlap 258886 ATTTCTCGTCTGAAA TCGCTGG AGG CCAGCGA TTCATCATTTAAATC ECUMN_0227 260591 - 259107 - | conserved hypothetical protein Aec18 TERM 337 260462 - 260451 - G 72 -7.2 -4.1552 | opp_overlap 260457 260458 CATGGCGGCAATAAA GGCG CTCA CGCC CTGGCGGGTGATATC ECUMN_0228 261117 - 260614 - | conserved hypothetical protein Aec17 TERM 338 261751 - 261778 + H 70 -9.2 -3.14132 | overlap 261754 AGCCGCATCACACTC TAACCCGTCG GGGATTAA CGACGGGTTG TTCGTAAAACAGCAG TERM 339 261754 - 261775 + H 75 -8.7 -3.71848 | overlap 261751 CGCATCACACTCTAA CCCGTCG GGGATTAA CGACGGG TTGTTCGTAAAACAG ECUMN_0229 261820 - 262338 + | Conserved hypothetical protein Aec16 (Hcp-like) TERM 340 262350 - 262377 + F 100 -14.3 -4.89852 | opp_overlap 262350 262353 ATAAATCTGAGTCAA CAACATCCTGC CTTCGT GCAGGATGTTG TTTTTGTACGTGTAA TERM 341 262377 - 262350 - f 89 -14.3 -3.09234 | opp_overlap 262350, overlap 262353 ATAAATCTGAGTCAA CAACATCCTGC CTTCGT GCAGGATGTTG TTTTTGTACGTGTAA TERM 342 262374 - 262353 - f 78 -10.2 -3.68341 | opp_overlap 262350, overlap 262350 AATCTGAGTCAACAA CATCCTGC CTTCGT GCAGGATG TTGTTTTTGTACGTG ECUMN_0230 262559 - 264517 + | conserved hypothetical protein, putative VgrG/E protein associated with Rhs elements ECUMN_0231 264514 - 265356 + | hypothetical protein TERM 343 266127 - 266113 - g 100 -2.1 -5.82281 | AAAGAGATAAAAAAA CTTCG ACAAA CAAAG CAACTGGAACAGATA TERM 344 266298 - 266309 + G 74 -2.2 -5.0809 | overlap 266293 TACCGATATCCAGGA TGGC CCCT GTCA TTTTTATGGTTTGTT TERM 345 266582 - 266596 + G 82 -2.8 -5.18726 | GTGTGGTGAGTGCGA CGTTTG AGG CGAATG TTTTTGTTGTACAAC ECUMN_0232 265378 - 266949 + | hypothetical protein ECUMN_0233 267016 - 268026 + | conserved hypothetical protein; putative exported protein TERM 346 268057 - 268093 + F 100 -9.6 -5.32608 | ACAAATCAGGATGTC CGGTAAGGTGATTA TTACTGAGT TAAGCACCTTACCG TTTTTTAAATTTTTT TERM 347 268690 - 268655 - g 84 -7.6 -4.68424 | gap 1, opp_overlap 268663 268667 268671 268680, overlap 268657 268677 268680 CAATTGATGGAAAAA CGCTCCGGC-ACTCTTA TGA CAAGAGTCGCCGCAGGG GAGCGATTCATGTCA yhhI 268336 - 269295 + | putative transposase ECUMN_0235 269463 - 269323 - | hypothetical protein TERM 348 269544 - 269522 - H 73 -6.3 -4.36262 | AGACTGACATCAAAA CCGAAGG GGCGTCCAG CCTTCGG GATAAGTCTGCGAGT ECUMN_0236 269827 - 271077 + | Putative reverse transcriptase TERM 349 271893 - 271858 - g 70 -4 -4.68424 | gap 1, opp_overlap 271866 271870 271874 271883, overlap 271860 271880 271883 CAATTGATGGAAAAA CGCTCCGAC-ACTCTTA TGA CAAGAGTCGCCGCAGGG GAGCGATTCATGTCA yhhI 271524 - 272660 + | putative transposase ECUMN_0238 272780 - 273283 + | Conserved hypothetical protein Aec8; Rhs element associated TERM 350 273609 - 273623 + G 74 -3.4 -4.99861 | opp_overlap 273597 273596 273609, overlap 273611 AACGCCAGTTATTAA CCGGCT GGG GGCCTG TTTTTATAATTGGTG ECUMN_0239 273350 - 273862 + | conserved hypothetical protein Aec7 yafV 274904 - 274134 - | putative C-N hydrolase family amidase TERM 351 275504 - 275515 + G 72 -4.4 -4.68645 | opp_overlap 275504, overlap 275496 275499 CGGCAGCCTGGAAAA CCAT CCGG ATGG TTTTAATTTTAAATA ivy 275058 - 275531 + | inhibitor of vertebrate C-lysozyme TERM 352 275565 - 275548 - T 100 -12.7 -4.56367 | opp_overlap 275548 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG TERM 353 275548 - 275565 + T 100 -12.7 -3.73068 | opp_overlap 275548 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG fadE 278018 - 275574 - | acyl coenzyme A dehydrogenase TERM 354 277264 - 277250 - G 74 -10 -3.51924 | CCCCCATGCAGACAA TTCCGG TAT CCGGAA TCGCGCCCGCATCGG TERM 355 277667 - 277686 + g 70 -4.2 -4.62069 | overlap 277651 CTGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 356 278495 - 278476 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 278470, overlap 278477 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCCATTTCCGACG lpcA 278258 - 278836 + | D-sedoheptulose 7-phosphate isomerase TERM 357 278847 - 278878 + F 82 -10 -3.90318 | opp_overlap 278838 278857 278858, overlap 278848 278857 278858 AGTAAGTCTGGCGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGTGCGCTGATGC TERM 358 278848 - 278877 + F 87 -13.5 -2.93869 | opp_overlap 278838 278857 278858, overlap 278847 278857 278858 GTAAGTCTGGCGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTGTGCGCTGATG TERM 359 278911 - 278858 - f 81 -12.3 -2.57931 | opp_overlap 278848 278847 278857 278858 278901, overlap 278857 CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATTTG TGCG CTGATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 360 278858 - 278911 + F 81 -12.3 -2.56747 | opp_overlap 278858 278857, overlap 278848 278847 278857 278901 CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATTTG TGCG CTGATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 361 279769 - 279748 - g 74 -8.7 -3.91084 | opp_overlap 279763 TGACGGGCAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGCGCTTATT yafJ 279042 - 279809 + | putative glutamine amidotransferases class-II yafK 280520 - 279780 - | hypothetical protein TERM 362 281046 - 281036 - g 77 -8.2 -4.13654 | overlap 281029 281037 TGCCGAAAGCAGAAA GGCG CTG CGCC AGCACAACCGCGAAC yafL 280812 - 281570 + | putative exported hydrolase yafM 281747 - 282244 + | hypothetical protein ECUMN_0248 283449 - 282403 - | transposase ORF B, IS3 family TERM 363 282962 - 282976 + gT 71 -2.1 -4.93898 | TTCGGCAGACAGGTA TGTTC CTGAC GAGCA TTTTTGTACTGATGT TERM 364 283260 - 283242 - GT 71 -8.9 -3.33087 | opp_overlap 283234 AACAGAGGCTGACAA CTGAGTG GCTGT CACTCAG TCTGGCAACTATCGT ECUMN_0249 283616 - 283269 - | transposase ORF A, IS3 family TERM 365 283877 - 283908 + r 70 -10 -2.57564 | opp_overlap 283887, overlap 283876 TGTGCCGGATCGGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA ATTGTGCACCGATGC fhiA 286037 - 283944 - | flagellar system protein lfhB 287160 - 286021 - | Lateral flagellar export/assembly protein (FlhB-like) lfiR 287932 - 287150 - | Flagellar biosynthetic protein fliR lfiQ 288206 - 287934 - | Lateral flagellar export/assembly protein (FliQ-like) lfiP 288961 - 288209 - | Lateral flagellar export/assembly protein, FliP-like lfiN 289329 - 288958 - | Lateral flagellar export/assembly protein, Flagellar motor switch (C ring) (FliN-like) lfiM 290173 - 289322 - | Lateral flagellar export/assembly protein Flagellar motor switch C-ring (FliM-like) TERM 366 290372 - 290341 - H 70 -10 -2.57564 | opp_overlap 290351, overlap 290340 GCATCGGTGCACAAT TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACCGTTCAGGCACA TERM 367 291016 - 291027 + G 72 -7.2 -4.26344 | opp_overlap 291015, overlap 291018 CCTTGAGCAGGAAGT CGCC GCCG GGCG TTTTCGTGAAGATCT lafK 290561 - 291541 + | Lateral flagellar RpoN-interacting regulatory protein lfiE 291556 - 291897 + | Lateral flagellar basal body component protein (FliE-like) TERM 368 291999 - 292019 + G 74 -9.7 -3.55487 | TGGCGGGAGTGGGGC TTGCCGTTG CGG CGACGGCGA TTATCGTTAGTGTGC TERM 369 292429 - 292395 - g 70 -5.1 -4.3255 | gap 1, overlap 292428 CGCTCAACGAAGAAA GCTCGTTTGTGG-TCA GCGA TGAGCCACAAAACAGC GCCTCGGTAGTGGTG TERM 370 292777 - 292765 - g 70 -10.5 -2.78266 | overlap 292762 AACCCAGGAACACTA CGGCG ACG CGCCG AAAATCAACCGCGAA lfiF 291902 - 293548 + | Lateral flagellar M-ring protein (FliF-like) lfiG 293526 - 294536 + | Lateral flagellar C-ring switch protein (LfiG-like) TERM 371 295248 - 295221 - g 78 -7.7 -4.41348 | opp_overlap 295221 295220 295210 CCGCGCTGAAAGAAA CACTCACGCCG GAGTCG CAGGGTGAGTG ATTTTTCCGCTTTCG lfiH 294539 - 295249 + | Lateral flagellar export/assembly protein (LfiH-like) lgiI 295242 - 296579 + | Flagellum-specific ATP synthase, Lateral flagellar export/assembly protein lfiJ 296582 - 297016 + | Lateral flagellar export/assembly protein (LfiJ-like) ECUMN_0264 297019 - 297423 + | Glycerol-3-phosphate cytidylyltransferase, CDP-glycerol pyrophosphorylase (Teichoic acid biosynthesis protein D) TERM 372 297551 - 297518 - T 86 -11.1 -4.13728 | opp_overlap 297518 GACATATCCCCAAAA CATGTCGATGGCATA AACG TATTCCAACGACATG TTTAAAAATCGCATT TERM 373 297518 - 297551 + T 83 -11.1 -3.5764 | opp_overlap 297518 GACATATCCCCAAAA CATGTCGATGGCATA AACG TATTCCAACGACATG TTTAAAAATCGCATT ECUMN_0265 300110 - 297567 - | putative glysosyltransferase TERM 374 298631 - 298617 - G 95 -7.1 -5.24531 | AGTTTCCATAAAAAA GCCGA TGGTG TCGGC GATGGGTAACGCGGA TERM 375 298992 - 299012 + g 70 -6.9 -4.02022 | CAGGCTCGCCAGCAG CGTGTTCAG CAC CTGAATATG TTTCTCCTGCTTGAG TERM 376 299767 - 299780 + g 72 -4.5 -4.60487 | overlap 299768 AGCATATTGCGTTTT TTGCC CAGC GGCAG TTTTTCCGGGTGATG TERM 377 300248 - 300235 - R 76 -8.1 -4.21194 | overlap 300243 300246 CGTCAGCAGCGAAAA CGCTG AAAG CAGCG GCTCTGCCGCACATA lafV 301185 - 300217 - | putative lysine-N-methylase, Lateral flagellar associated protein (FliB/FliUV-like) TERM 378 300258 - 300246 - G 71 -10.5 -2.93783 | overlap 300235 300243 AAAACGCTGAAAGCA GCGGC TCT GCCGC ACATAACGACTGAAT lfgN 301701 - 301273 - | Lateral flagellar chaperone protein (FlgN-like) TERM 379 301396 - 301422 + g 73 -3.6 -4.82901 | overlap 301398 CGCTTTTTGCTCAAG GCGTTGCCACAA CTG TTGTGCTGCCGC TTTTTGTACCGCCGG lfgM 301992 - 301714 - | Lateral flagellar anti-sigma factor 28 protein (FlgM-like) lfgA 302810 - 302073 - | Lateral flagellar P-ring addition protein (FlgA-like) lfgB 302862 - 303227 + | Lateral flagellar rod protein (FlgB-like) lfgC 303230 - 303661 + | putative Flagellar basal-body rod protein flgC ( proximal rod protein) lfdD 303661 - 304374 + | Lateral flagellar rod protein (FlgD-like) TERM 380 304766 - 304791 + G 70 -5.3 -4.30719 | CAACGATGGCTTTTT TGTGACCTGCG ACAG CGCGGGCAACA TTTCTTATACCCGCG TERM 381 304947 - 304933 - g 70 -5.6 -4.36262 | overlap 304942 ATATCCAGATCAAAA CCGGCA ATA TCCCGG CGCAGGCCAGCAGCA lfgE 304518 - 305720 + | Lateral flagellar hook protein (FlgE-like) lfgF 305720 - 306457 + | Lateral flagellar rod protein (FlgF-like) TERM 382 306488 - 306527 + F 72 -10 -2.86961 | gap 1, opp_overlap 306480, overlap 306487 306522 306524 CGGATAAGGCGTTCA CGCCGCATCCGGCAGCTAT GCG GTGG-TGCCTGATGCGACG CTTTGCGTCTTATCA TERM 383 306886 - 306874 - g 78 -7.7 -4.42386 | overlap 306885 TCGGCACCCAGAAAA CCTTC ACC GAAGG CAACGTCGAAACCAC lfgG 306510 - 307421 + | Flagellar basal-body rod protein (flgG-like) (Distal rod protein) TERM 384 307607 - 307588 - f 80 -9.2 -4.015 | GCACCCACTAAACAA CCGGCCAC CCCC GTGGCCTG CAACACTAAACAGGC TERM 385 307728 - 307706 - g 80 -5.5 -5.00884 | overlap 307709 ATTCTGGTCAAAAAA GACGACGCA TACTT TGCGCCACC CAAAACCGAAGCGCC TERM 386 307742 - 307774 + G 81 -10.6 -3.57792 | gap 1, opp_overlap 307734 307739, overlap 307743 CCCAAAACCGAAGCG C-CGCCTCCGGCA GACGGGCG TGCCGGGGGCGTG TTTGAAACTGGCTAC TERM 387 307743 - 307772 + G 95 -14.3 -3.36694 | opp_overlap 307734 307739, overlap 307742 CCAAAACCGAAGCGC CGCCTCCGGCA GACGGGCG TGCCGGGGGCG TGTTTGAAACTGGCT lfgH 307628 - 308293 + | Flagellar L-ring protein 2 precursor (Basal body L-ring protein 2) (FlgH-like) TERM 388 308601 - 308562 - g 81 -7.2 -4.66833 | gap 3, opp_overlap 308566, overlap 308564 CCCGAAGGTGAAAAA CGTC-GCGGC-G-GTGGCG GTGAG CGCCACGCTGCCGCCGATG TACTCGCGCGGGCAG TERM 389 308987 - 309015 + G 70 -6.6 -4.0371 | gap 1, overlap 308977 ACGTTACCGTGCGCG CGCCCACCAGCCC CGGC GCGCGGGTG-GCG TTTATGTCGCAACTG lfgI 308293 - 309408 + | Flagellar P-ring protein 2 precursor (Basal body P-ring protein 2)(flgL-like) lfgJ 309408 - 309707 + | Lateral flagellar peptidoglycan hydrolase (FlgJ-like) TERM 390 309729 - 309705 - f 78 -8.5 -4.05446 | opp_overlap 309691, overlap 309708 TCGCCGAAGCATAAA TGAGGCTCCGA CGT TCGGTGCCTGA TGCGACGCTGGCGCG TERM 391 309726 - 309708 - f 73 -10.2 -3.0682 | opp_overlap 309691, overlap 309705 CCGAAGCATAAATGA GGCTCCGA CGT TCGGTGCC TGATGCGACGCTGGC TERM 392 310737 - 310722 - g 75 -6.8 -4.30576 | GTTTGATTATCAAAA CGACGT GCTG ACGCCG CTGACCGACACCATC TERM 393 310827 - 310839 + G 77 -6.9 -4.55295 | TCTCAACGGCAACCC CGGCG AGC CGCTG TTTATTTATGACGCC TERM 394 310992 - 310968 - g 77 -11.5 -3.14683 | ACAGGCGCTGATCAA TATCTCCACCG AAC CGCTGGAGATA GCCAACCTCGGCAGC lfgK 309883 - 311259 + | Lateral flagellar hook associated protein 1 (FlgK-like) lfgL 311274 - 312203 + | Lateral flagellar hook associated protein 3 (FlgL-like) TERM 395 312338 - 312322 - g 70 -4.4 -4.56597 | gap 1 GCGGTGCGGCAAAAA CTC-CCG GCGA CGGCGAG TGAATATCCGGCCTC TERM 396 312437 - 312464 + G 83 -12.1 -3.40403 | AGGCGGATCACTATC TCGGGCAACTG GAGCAG CAGTTGCTCGA TTATCGTCACAGCCA TERM 397 312555 - 312532 - g 86 -11 -3.87373 | opp_overlap 312531 CAGATGCTGGACAAA CGCACCGC GCTTTCCG GCGGTGCG GTGGACCGCCAGTTG lafW 312220 - 313197 + | putative Lateral flagellar hook associated protein ECUMN_0282 313270 - 313614 + | hypothetical protein ECUMN_0283 313624 - 313923 + | Transcriptional Regulator TERM 398 313974 - 313945 - T 93 -13.8 -3.16564 | GGTGCATTTTATGAA CCGGATTAGATA AAACGG TATCTAATCCGG TAAACATCAGCATTT lafZ 314874 - 313981 - | Lateral flagellar transmembrane regulator lafA 315243 - 316223 + | Lateral flagellin (FliC-like) TERM 399 316266 - 316295 + F 100 -16.5 -3.53091 | opp_overlap 316269 316272, overlap 316269 316272 GCCTTATCCGGCCAC GAACAACACCGCC TGCG GGCGGTGTTGTGC TTTCAGCGGCAGGCT TERM 400 316269 - 316292 + F 100 -16.8 -2.90496 | opp_overlap 316269 316272, overlap 316266 316272 TTATCCGGCCACGAA CAACACCGCC TGCG GGCGGTGTTG TGCTTTCAGCGGCAG TERM 401 316292 - 316269 - f 100 -16.8 -3.14564 | opp_overlap 316269 316266 316272, overlap 316272 TTATCCGGCCACGAA CAACACCGCC TGCG GGCGGTGTTG TGCTTTCAGCGGCAG TERM 402 316289 - 316272 - f 100 -12.7 -3.71848 | opp_overlap 316269 316266 316272, overlap 316269 TCCGGCCACGAACAA CACCGCC TGCG GGCGGTG TTGTGCTTTCAGCGG TERM 403 316272 - 316289 + F 95 -12.7 -3.60151 | opp_overlap 316272 316269, overlap 316269 316266 TCCGGCCACGAACAA CACCGCC TGCG GGCGGTG TTGTGCTTTCAGCGG TERM 404 316737 - 316748 + G 70 -7.2 -4.13945 | ACCACGTTCAGTATG GGCG ACGA CGCC TTTTCCGCTACCGGT lafB 316428 - 317744 + | Lateral flagellar hook associated protein 2 (FliD-like) lafC 317767 - 318159 + | Lateral flagellar chaperone protein (FliS-like) lafD 318164 - 318475 + | Lateral flagellar chaperone protein (FliT-like) TERM 405 318597 - 318561 - g 83 -10 -4.09685 | opp_overlap 318590, overlap 318534 GGTGAGCGGTGAAAA CGCGCCCGCGTTTACC CTGCC GAAAATGGCGGGCGCG GCGGTGGCAGAGCGC lafE 318472 - 319530 + | Lateral flagellar hook length control protein (FliK-like) lafF 319538 - 320005 + | Lateral flagellar associated protein (FliL-like) ECUMN_0291 320025 - 320741 + | putative RNA polymerase sigma factor for flagellar operon (FliA/lafS-like) TERM 406 320969 - 320958 - g 84 -3.6 -5.1861 | overlap 320960 GTGATCAGTAAAAAA CAGC TCGG GCCG GAGTTTCAGCGCCAG lafT 320754 - 321617 + | Chemotaxis protein lafT, Lateral flagellar motor protein A (MotA-like) TERM 407 321705 - 321691 - g 100 -2.8 -5.90981 | overlap 321692 321694 321695 GCAGATCAAAAAAAA TCATGC CGG GCATCA CGGCGGGGCGTGGAA TERM 408 322163 - 322181 + G 76 -3.8 -4.88407 | TTCTTTAAAACTTTG CTGGTG GAGTTAG CACCGG TTTTTGATTCGCTCG TERM 409 322415 - 322384 - g 77 -5.8 -4.62069 | gap 1, opp_overlap 322385 322386, overlap 322392 GCTGGATGCCAAAAA TCCGCAAAGCGCGGG CAA CCGGCGCATTG-AGA TTATGGTGCTGACCA TERM 410 322408 - 322392 - g 73 -9.3 -3.68853 | opp_overlap 322386 322385, overlap 322384 CCAAAAATCCGCAAA GCGCGGG CAA CCGGCGC ATTGAGATTATGGTG mbhA 321620 - 322543 + | flagellar system protein dinB 322614 - 323669 + | DNA polymerase IV TERM 411 323911 - 323900 - g 83 -5.8 -4.9934 | ACAAGAGGAGAAAAA GCCT ATAA AGGC GCGCTTCCGTCCAAG yafN 323721 - 324014 + | putative antitoxin of the YafO-YafN toxin-antitoxin system yafP 324425 - 324877 + | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 412 324900 - 324920 + F 72 -3.1 -4.89477 | TTGCAATGAAAATAA CGCCCGCCT AGT ATGTGCGCG TTTTCTTATTCCACA TERM 413 325955 - 325930 - g 82 -3.1 -5.26875 | overlap 325931 TTGCGAACGAAAAAA CGCTCCACTCG CTGG CGCATGGGGCA GGGCGTAAATGGGGG ECUMN_0299 325056 - 326207 + | hypothetical protein prfH 326318 - 326818 + | putative peptide chain release factor TERM 414 326865 - 326827 - g 81 -12.5 -3.21912 | overlap 326823 TGTGTAATTGAGGAA TGTCTCCCGCCGTTTTC TATAT GAAAGCGGCGGGAAAAA CGAAAGGAATAGTCA ECUMN_0301 326826 - 327389 + | hypothetical protein ECUMN_0302 327687 - 327406 - | hypothetical protein TERM 415 327663 - 327686 + g 93 -12.4 -3.90843 | opp_overlap 327661 327659 327664, overlap 327664 TTGGCTTCAAACAGT AGTCCACGCC CGCA GGCGTGGACA TTATTGTAATTACTT TERM 416 327685 - 327664 - G 95 -15.9 -2.84325 | opp_overlap 327663 327664, overlap 327661 327659 TGGCTTCAAACAGTA GTCCACGCC CGCA GGCGTGGAC ATTATTGTAATTACT TERM 417 327664 - 327685 + g 95 -15.9 -2.93422 | opp_overlap 327664 327661 327659, overlap 327663 TGGCTTCAAACAGTA GTCCACGCC CGCA GGCGTGGAC ATTATTGTAATTACT pepD 329153 - 327696 - | aminoacyl-histidine dipeptidase (peptidase D) TERM 418 327815 - 327836 + g 71 -2.2 -5.00616 | opp_overlap 327815 TTGGCCCGATAGAAA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGACC TERM 419 328751 - 328761 + g 72 -6.8 -4.25104 | GCACTTCCAGCGGGC CGTG AAC CACG TTTTCGTCAGCCAGA TERM 420 329134 - 329111 - G 90 -9 -4.57837 | gap 1, opp_overlap 329113 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG gpt 329414 - 329872 + | guanine-hypoxanthine phosphoribosyltransferase TERM 421 329876 - 329906 + F 83 -7.4 -4.74103 | overlap 329879 TCCGGTCGCTAATCT TTTCAACGCCTGGC ACT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 422 329879 - 329903 + F 100 -17.9 -4.47888 | overlap 329876 GGTCGCTAATCTTTT CAACGCCTGGC ACT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 423 330489 - 330512 + G 72 -4.4 -4.70659 | overlap 330490 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 329964 - 331208 + | hydrolase, binds to enzyme IIA(Glc) crl 331266 - 331667 + | DNA-binding transcriptional regulator TERM 424 331699 - 331674 - T 75 -9.1 -3.64822 | gap 1, opp_overlap 331674, overlap 331675 ACGGCGTGAGTGAAA TGTGCCGGATGC ATC ACATCCGGCA-A TATCCATTAAAACTG TERM 425 331699 - 331675 - T 74 -10.7 -2.78679 | opp_overlap 331674, overlap 331674 CGGCGTGAGTGAAAT GTGCCGGATGC ATC ACATCCGGCAA TATCCATTAAAACTG phoE 332761 - 331706 - | outer membrane phosphoporin protein E TERM 426 332468 - 332478 + g 79 -2.4 -5.21709 | TTTCAACCCGGCAAA AGCG AGA CGCG TTTTTTGCTGTGCAG TERM 427 332816 - 332794 - H 76 -10.6 -3.04501 | ATTAACGCGCGAATA TTCAGCGGGA GAG TCCCGTTGAA AACAGGAAAGTTTTT proB 333049 - 334152 + | gamma-glutamate kinase proA 334164 - 335417 + | gamma-glutamylphosphate reductase TERM 428 335478 - 335424 - T 89 -8.4 -4.86731 | opp_overlap 335424 335477 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 429 335424 - 335478 + T 72 -8.4 -3.69437 | opp_overlap 335424, overlap 335477 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG ECUMN_0311 337410 - 336526 - | Putative LysR-like transcriptional regulator ECUMN_0312 337576 - 338733 + | conserved hypothetical protein; putative exported protein, putative hydrolase TERM 430 338779 - 338757 - f 100 -14.8 -3.68619 | opp_overlap 338757 CTGAATTGATGCAAA GCCACCGGCC ATA GGCTGGTGGC TTTTATCCTGATCTT TERM 431 338757 - 338779 + F 100 -17 -4.50583 | opp_overlap 338757 CTGAATTGATGCAAA GCCACCGGCC ATA GGCTGGTGGC TTTTATCCTGATCTT TERM 432 338854 - 338866 + G 70 -4.1 -4.62069 | CATCATCAGCGCGCA TACTG GGG CGGTA TTTTTGCCATGACCC TERM 433 339426 - 339410 - g 88 -8.7 -4.65916 | TGGATGCGAATAAAA GCCACAC TTC ATGTGGC GCGGTATTCCGCTTA TERM 434 339587 - 339599 + G 81 -6.9 -4.63486 | overlap 339588 339590 CGATTTTGCTGATTA TCGGC GTG GCCGG TTTTATTGGCACGCT opdE 338809 - 340002 + | Transcription regulatory protein opdE TERM 435 340046 - 340071 + T 93 -11.9 -4.12942 | gap 1, opp_overlap 340040 GTTACACAAGGCGAT GAGCGCCC-ACT ATG GGTTGGGCGCTC TTTTAAACGATTTAG yagQ 341139 - 340183 - | hypothetical protein TERM 436 340341 - 340351 + g 70 -6.8 -4.08767 | CCCTGGACCATCCCA GCTC GTG GAGC TTTTGCAGACGTAAA TERM 437 340916 - 340892 - G 83 -9.9 -4.08767 | TCCAGCGCTTCAAAA GCGGCAGCG GCCTCCA CGCAGCCGC CAGAGACAAAACCGC TERM 438 340939 - 340928 - G 70 -3.6 -4.60797 | overlap 340930 CCGCCAGAGACAAAA CCGC AGTA ACGG CCATCTTCGCGCACC yagR 343347 - 341149 - | putative oxidoreductase with molybdenum-binding domain TERM 439 341967 - 341980 + g 75 -4.5 -4.79352 | TCATGTCCGTTTCCA CGGTA ACGG TGCCG TTTTGTTCTAGGTGA TERM 440 342922 - 342933 + g 70 -5.8 -4.1552 | TTTCTCGTCCGCCAG GGAG TAAG CTCC TTTATTACGGCGATA TERM 441 343085 - 343128 + g 100 -12.5 -4.57073 | opp_overlap 343112, overlap 343077 TCGCCTTTGCCGAGT GC-CCCGGCGTTACTGGCGGT AATG ACAGCCAGT-ACGCCCGGCGC TTTTTGCGCGGCGTC yagS 344300 - 343344 - | putative oxidoreductase with FAD-binding domain ECUMN_0318 344825 - 345172 + | transposase ORF A, IS3 family TERM 442 345181 - 345199 + GF 71 -8.9 -3.33087 | opp_overlap 345172 ACGATAGTTGCCAGA CTGAGTG ACAGC CACTCAG TTGTCAGCCTCTGTT TERM 443 345479 - 345465 - gf 71 -2.1 -4.93898 | ACATCAGTACAAAAA TGCTC GTCAG GAACA TACCTGTCTGCCGAA ECUMN_0319 344992 - 346038 + | transposase ORF B, IS3 family TERM 444 346147 - 346127 - f 100 -12.5 -4.03093 | opp_overlap 346135, overlap 346130 TAGAATGAGGATAAA CCACGGCGG TCG CCGCCGTTG CGGCGCTGACTTTAA TERM 445 346144 - 346130 - f 83 -12.8 -3.05238 | opp_overlap 346135, overlap 346127 AATGAGGATAAACCA CGGCGG TCG CCGCCG TTGCGGCGCTGACTT TERM 446 346135 - 346157 + F 91 -11.2 -3.74693 | opp_overlap 346130 346127 GGATAAACCACGGCG GTCGCCGCCG TTG CGGCGCTGAC TTTAATCAGATCGCG yagU 346654 - 347268 + | conserved hypothetical protein; putative inner membrane protein TERM 447 347281 - 347311 + T 81 -12.8 -2.52795 | opp_overlap 347281 347287, overlap 347287 TAATGCATTGAATAA TAAAAATGGCGC AAATGCA GCGCCATTTTTA TAGGTTAAAAACATT TERM 448 347311 - 347281 - T 95 -12.8 -3.69283 | opp_overlap 347281 347287, overlap 347287 TAATGCATTGAATAA TAAAAATGGCGC AAATGCA GCGCCATTTTTA TAGGTTAAAAACATT TERM 449 347287 - 347305 + T 84 -7.4 -4.91712 | opp_overlap 347281 347287, overlap 347281 ATTGAATAATAAAAA TGGCGC AAATGCA GCGCCA TTTTTATAGGTTAAA TERM 450 347305 - 347287 - T 91 -7.4 -5.30348 | opp_overlap 347287 347281, overlap 347281 ATTGAATAATAAAAA TGGCGC AAATGCA GCGCCA TTTTTATAGGTTAAA yagV 348870 - 348160 - | hypothetical protein yagW 350482 - 348839 - | putative surface or exported protein TERM 451 349963 - 349974 + gr 70 -5.8 -4.1711 | TCATTGTAAAGCTGC TGCC GACG GGCA TTTGTTGCAGATACT yagX 352997 - 350472 - | hypothetical protein TERM 452 350576 - 350593 + g 70 -4 -4.65078 | GCGCCTGGTTGAGTT CCAGCG CCACTT CGCAGG TTTTATTGCCACTGT TERM 453 350999 - 351033 + g 100 -12.1 -4.62069 | overlap 351002 TGTCGAATATCACCC CAGCGTTGCCATCGG TCTGC CCGCTGGCAGCGATG TTTTTACCCTGCCAG TERM 454 351002 - 351030 + g 78 -12.4 -2.95166 | overlap 350999 CGAATATCACCCCAG CGTTGCCATCGG TCTGC CCGCTGGCAGCG ATGTTTTTACCCTGC yagY 353691 - 353023 - | hypothetical protein TERM 455 353732 - 353714 - R 95 -11.7 -4.24342 | CCGTCCAGGAATAAA GCAGGGG GGCTA CCCCTGC TGGTACATCAGAGAG ecpA 354336 - 353749 - | E. coli common pilus (ECP) TERM 456 353951 - 353981 + g 91 -7.6 -5.0538 | overlap 353952 CCGCCCAGTACGCCG TTGGCGGTATCG ATCATCA CGGTATCGCCAG TTTTTTCGACTGCCG TERM 457 354194 - 354219 + g 91 -7.5 -5.1615 | opp_overlap 354201, overlap 354196 AGGCTACCGAGTGGC GTCACAACCAG CTTA CTGGTGGTGTC TTTTTTGGCTGTTGC TERM 458 354196 - 354217 + g 78 -8.7 -4.20118 | opp_overlap 354201, overlap 354194 GCTACCGAGTGGCGT CACAACCAG CTTA CTGGTGGTG TCTTTTTTGGCTGTT ykgK 355001 - 354411 - | putative transcriptional regulator TERM 459 355029 - 355013 - R 75 -9.5 -3.56092 | opp_overlap 355013 TCACTACTTTCCAAA CCTGTAA TTT TTACAGG TACATTCAGTTTCTT TERM 460 355986 - 355954 - R 100 -13 -4.26344 | opp_overlap 355958 ACATCCCCAGGAAAA TTAATGCTGGTGTA ATAAA TACACCAACATTAA TCCGGTCTGATTATT ykgM 356441 - 356178 - | putative ribosomal protein ECUMN_0330 356728 - 356495 - | hypothetical protein TERM 461 356953 - 356931 - R 77 -4.8 -5.00616 | opp_overlap 356933, overlap 356933 CCTCGCTTTAAAAAA GAGTGCACTT CGT AAGTGCCCTT ATATAAATAACGAGT TERM 462 356951 - 356933 - R 72 -7.4 -4.13561 | opp_overlap 356933, overlap 356931 TCGCTTTAAAAAAGA GTGCACTT CGT AAGTGCCC TTATATAAATAACGA TERM 463 356969 - 356980 + r 77 -4.4 -5.08169 | ATATAAATAACGAGT TTGG TCAA CCAA TTTTTTGACATGTAT ECUMN_0331 358523 - 357381 - | putative NADH-dependent flavin oxidoreductase TERM 464 358448 - 358471 + g 82 -2.4 -5.36441 | opp_overlap 358454, overlap 358452 358454 TCGTCATAGGAGCCA TAACGATACG ATTA CGTAGCTTTA TTTTTTCTGTCAGCA TERM 465 358452 - 358467 + g 77 -3.2 -5.16969 | opp_overlap 358454, overlap 358448 358454 CATAGGAGCCATAAC GATACG ATTA CGTAGC TTTATTTTTTCTGTC TERM 466 358762 - 358734 - R 70 -6 -4.20981 | opp_overlap 358733 TCAATAAAGGATAAA TGTCAGGGAGAT AAGGA ATCTCCCTGTAA GATTATTACAAATGT ECUMN_0332 359688 - 358768 - | hypothetical protein ECUMN_0333 359782 - 360771 + | putative LysR-like transcriptional regulator TERM 467 360762 - 360752 - f 70 -5.4 -4.37886 | TTATGGTGGAGAAAA GAGT AAA ACTC GAAAATTGATGATAT ECUMN_0334 360954 - 361889 + | putative transcriptional regulator, lysR family TERM 468 361911 - 361890 - T 72 -8.7 -3.70773 | opp_overlap 361890 CGCTACACCGAATAA CGGGTCC TTTATCCT GGACCCG TTTGGGTATTAGCGG TERM 469 361890 - 361911 + T 75 -8.7 -3.76373 | opp_overlap 361890 CGCTACACCGAATAA CGGGTCC TTTATCCT GGACCCG TTTGGGTATTAGCGG ECUMN_0335 362909 - 361920 - | putative aldo-keto reductase TERM 470 362157 - 362180 + g 80 -5.2 -4.90013 | overlap 362159 CCCTTTCTCCGCAGC CAGTTCACCT AACA AGGTGACCAG TTTTTCATTGGCTTC ECUMN_0336 363787 - 362936 - | putative aldo-keto reductase TERM 471 364264 - 364241 - H 77 -11.2 -2.73529 | opp_overlap 364259, overlap 364238 364237 364260 TCTTACATAAAGGTA TTTCCTTTTC TGCG GAAAAGGAAA TCGGGGATTTCCCGG TERM 472 364276 - 364260 - H 81 -9.5 -4.07568 | opp_overlap 364259 364265 364266, overlap 364241 364238 364237 364265 364266 CTTTTCTGCGGAAAA GGAAATC GGG GATTTCC CGGTTTTTCTGACAA TERM 473 364265 - 364279 + H 76 -5.6 -4.82901 | opp_overlap 364238 364237 364260 364265 364266, overlap 364259 364266 CTGCGGAAAAGGAAA TCGGGG ATT TCCCGG TTTTTCTGACAAGCA TERM 474 365058 - 365022 - g 80 -5.7 -5.00616 | opp_overlap 365050 365051 TCTGGCTGGAAAAAA TCGCCGGATGTTGAGGA TTA TCAGGAACGCCCGGCGA ATGGCTGGGATATTC TERM 475 368273 - 368258 - g 76 -3.9 -4.91109 | overlap 368259 CGCGGATGATAAAAA CGCGG AGCTCA CCGCA TCATCTGATGTGCAA ECUMN_0337 364353 - 368606 + | putative adhesin TERM 476 368670 - 368642 - T 100 -14.8 -4.21438 | opp_overlap 368642, overlap 368645 CATTCTAATAAACAA TAATGGCGTTGA CATCT TCAACGCCATTA TTTATTGAATTGCCT TERM 477 368642 - 368670 + T 100 -14.8 -4.25681 | opp_overlap 368642 368645 CATTCTAATAAACAA TAATGGCGTTGA CATCT TCAACGCCATTA TTTATTGAATTGCCT TERM 478 368667 - 368645 - T 95 -12.1 -4.21772 | opp_overlap 368642, overlap 368642 TCTAATAAACAATAA TGGCGTTGA CATCT TCAACGCCA TTATTTATTGAATTG ykgA 369617 - 368727 - | Putatve transcriptional regulator ykgA ECUMN_0339 369817 - 370701 + | putative reductase TERM 479 370691 - 370714 + T 74 -7.6 -4.18018 | opp_overlap 370691 370708, overlap 370683 GTCTTGCTGTAAAAA TACATGATTG ATAT TAATCATGTA TTTTACCTGAGACGA TERM 480 370714 - 370691 - T 77 -6.9 -4.56597 | opp_overlap 370683 370691, overlap 370708 GTCTTGCTGTAAAAA TACATGATT GATATT AATCATGTA TTTTACCTGAGACGA ykgB 371454 - 370861 - | conserved hypothetical protein; putative inner membrane protein ykgI 371702 - 371466 - | hypothetical protein TERM 481 371771 - 371802 + r 100 -12.4 -4.45261 | overlap 371769 371774 TAAGATTCTTTTCTC TGAGACGCCAGAAT ATTT GTTCTGGCGTCTGA TTTTGAGTTTATTTG TERM 482 371774 - 371799 + r 95 -14.1 -3.16695 | overlap 371769 371771 GATTCTTTTCTCTGA GACGCCAGAAT ATTT GTTCTGGCGTC TGATTTTGAGTTTAT ykgC 373136 - 371811 - | putative pyridine nucleotide-disulfide oxidoreductase TERM 483 372571 - 372561 - G 81 -6.8 -4.65895 | opp_overlap 372560 372561 TTCCCGAGGCAAAAA CAGC GAA GCTG CTTCTAAAATGGTTA ykgD 373363 - 374217 + | putative AraC-type DNA-binding transcriptional regulator ykgE 374745 - 375464 + | putative hydroxyacid oxidoreductase (Fe-S centre) ykgF 375475 - 376902 + | putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain ykgG 376895 - 377590 + | hypothetical protein ECUMN_0347 377861 - 377664 - | hypothetical protein TERM 484 377704 - 377730 + gT 100 -16.8 -3.59979 | opp_overlap 377704 CTGCTCTTCTGTAAA TATCCTGGCATT AGT AATGCCAGGATA TTTACAGTGAAAAAG TERM 485 377730 - 377704 - GT 100 -16.8 -3.53012 | opp_overlap 377704 CTGCTCTTCTGTAAA TATCCTGGCATT AGT AATGCCAGGATA TTTACAGTGAAAAAG TERM 486 377762 - 377747 - GT 72 -7.6 -3.96999 | TTACAGTGAAAAAGA CAGGAA TCCA TTCCTG AAGACGGGCTCCCTT TERM 487 377852 - 377867 + gT 85 -3.3 -5.40072 | TGCCCAGAGTTTTGT TGGTA TTCATC TACCA TTTTTTTGACAAGGC ykgH 378501 - 377833 - | conserved hypothetical protein; putative inner membrane protein TERM 488 378020 - 378004 - GR 81 -10.9 -3.48395 | opp_overlap 377999 377997 ACCGTTCGGATACAA TGACCAG TTC CTGGTCA GGTATATCATTTTTG TERM 489 378532 - 378522 - R 83 -5.4 -5.19275 | ATCCAGAAAATAAAA TCTG CCG CAGA TAAATGAATTAATAG TERM 490 378605 - 378587 - R 87 -6 -5.2112 | AATATCAGCAAAAAA CCAGCATC ATG AATACTGG ATATGAAGCATGAGA betA 380382 - 378712 - | choline dehydrogenase, a flavoprotein TERM 491 380359 - 380337 - G 76 -11.2 -3.35996 | overlap 380338 GACGGGTAGCGAGAA CGTTGCCGGC TGA GCCGGCACCA ATAATGATGTAGTCA TERM 492 380358 - 380338 - G 76 -12.5 -2.61383 | overlap 380337 ACGGGTAGCGAGAAC GTTGCCGGC TGA GCCGGCACC AATAATGATGTAGTC betB 381868 - 380396 - | betaine aldehyde dehydrogenase, NAD-dependent betI 382469 - 381882 - | DNA-binding transcriptional repressor TERM 493 382268 - 382256 - G 72 -6.9 -4.21275 | GTAATCGATTCAAAA CCGCG TCA CGCAG CTGACTGGTGATATC TERM 494 382289 - 382308 + g 81 -5.8 -4.87665 | gap 1 TGGTGATATCGCGCA TGGT-TGCT TCC AGCAGACCA TTTTTGTCCCTGAAA TERM 495 382365 - 382349 - G 78 -9.3 -3.86346 | opp_overlap 382338 382364 TGATCCCCGTAGAAA CGCCTGC ACG GCGGGCG ATCTGCGCGATCGTT TERM 496 382675 - 382630 - g 72 -10.6 -3.11922 | gap 1, opp_overlap 382630 382635, overlap 382628 382635 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 497 382630 - 382675 + G 91 -10.6 -4.21812 | gap 1, opp_overlap 382630 382628 382635, overlap 382635 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 498 382670 - 382635 - g 72 -4.7 -4.67635 | gap 1, opp_overlap 382630 382635, overlap 382630 382628 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 499 382635 - 382670 + G 81 -4.7 -5.093 | gap 1, opp_overlap 382635 382630 382628, overlap 382630 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 500 383647 - 383659 + G 71 -9.1 -3.56576 | TACCATTCGCCAGTT CGTGC TGG GCACG TTGATTATTCCGTTT TERM 501 384036 - 384062 + G 73 -3.7 -4.73613 | opp_overlap 384027 384025, overlap 384043 AAAACACCACGGTAA TCATGGGGCTG CCGTT CAGCTTTGTGA TTTTCTTCGTGATGG betT 382598 - 384631 + | choline transporter of high affinity TERM 502 384673 - 384648 - T 100 -13.3 -4.4009 | opp_overlap 384648 TGTTATTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT TERM 503 384648 - 384673 + T 100 -15.5 -4.23281 | opp_overlap 384648 TGTTATTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT ECUMN_0353 385188 - 385000 - | hypothetical protein yahA 385508 - 386596 + | cyclic di-GMP phosphodiesterase yahB 387570 - 386638 - | putative DNA-binding transcriptional regulator yahC 388159 - 387662 - | conserved hypothetical protein; putative inner membrane protein yahD 388417 - 389022 + | putative protein with ankyrin domain yahE 389062 - 389925 + | hypothetical protein TERM 504 390010 - 389996 - g 90 -10 -4.41616 | ACGCGTGCAAATAAA CTCGAC GGC GTCGAG CAGGCATTTGTGGCG yahF 389915 - 391462 + | putative enzyme with acyl-CoA domain yahG 391462 - 392880 + | hypothetical protein TERM 505 393211 - 393174 - g 71 -10.5 -2.87132 | gap 1, opp_overlap 393170 CGCCGCGCGGAGATA GCCCACGAGCGCGAAGGG CTG CCCTTAACGC-CGCTGGC GAACTGTGTGGCGGA yahI 392976 - 393926 + | putative carbamate kinase TERM 506 394411 - 394396 - g 70 -4.6 -4.47328 | overlap 394383 394397 AACTCGAGCAGAAAA TGCTGC CGGA GCTGCA ACCGTACACTCAGGA TERM 507 394536 - 394520 - g 72 -5.1 -4.56597 | overlap 394521 TTCCGGCCTGAAAAA TCTGCAA AAT TTGCAGG CGGTGCTGGCGCGAC yahJ 393936 - 395318 + | putative deaminase/amidohydrolase with metallo-dependent hydrolase domain TERM 508 395380 - 395364 - f 79 -9.4 -3.76775 | CGTAAGAGATTTAAA GCCCCA GGGAG TGGGGC GGGAATGGTTTGTTA ECUMN_0363 395580 - 396023 + | hypothetical protein ECUMN_0364 396274 - 397260 + | putative periplasmic binding protein, substrate ribose (sugar-binding protein), ABC-type transport system TERM 509 397270 - 397287 + F 100 -12.7 -3.9461 | TATTAATCCATTTCT TCGGGGC GAAA GCCCCGA TTCTTATTGCCAGGG TERM 510 398084 - 398065 - g 76 -7.9 -4.18018 | TTGTGGCAGGGAAAA TCCAGCA TCCCAG TGCTGGA GGTGCGTAATTTAAG ECUMN_0365 397294 - 398793 + | Putative ATP-binding component of ABC sugar transport system ECUMN_0366 398786 - 399757 + | putative permease component of sugar ABC transport system TERM 511 400422 - 400434 + GF 71 -3.3 -4.79223 | TTCCGCCTTGCTTTG TGCGG TAG CGGCA TTTTTGATGATGTCG ECUMN_0367 399724 - 400710 + | putative permease component of sugar ABC transport system TERM 512 401452 - 401442 - g 77 -8.2 -4.14392 | CGCGAAGCGGCAAAA GCCC TGG GGGC CGATGAAGTTGTTAA yahK 400797 - 401846 + | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 513 401922 - 401883 - f 71 -8.9 -3.37493 | gap 2, opp_overlap 401883, overlap 401884 GGTTTAACATATTAA CTTCGCTCTCCACTTAACT TTTT AGTTAAG-G-AGAGCGAAA TAATATCAAAGTAGC TERM 514 401921 - 401884 - f 70 -10.2 -2.62175 | gap 2, opp_overlap 401883, overlap 401883 GTTTAACATATTAAC TTCGCTCTCCACTTAACT TTTT AGTTAAG-G-AGAGCGAA ATAATATCAAAGTAG yahL 402089 - 402904 + | hypothetical protein TERM 515 403452 - 403431 - g 95 -7.2 -5.31059 | AGAGCAATGAAAAAA GCCCACAC AGGGGA GAGTGGGC TGAAATGGGAAGCTA yahM 403317 - 403562 + | hypothetical protein yahO 404397 - 404672 + | hypothetical protein prpR 406359 - 404773 - | DNA-binding transcriptional activator TERM 516 405540 - 405571 + g 79 -12.4 -3.04461 | gap 1 CAAACGGATGCGACT TTTTGCCCTGTCGCG CAT CGTGGC-GGGCAAAA TATTCCCGATGAATC TERM 517 406926 - 406916 - g 72 -8.2 -3.80862 | AAATCGATGATTAAA GCCG GTG CGGC GGGATTGCATATTGA TERM 518 407394 - 407382 - g 70 -5.5 -4.43501 | AAGGCACGCAGAAAA GCGTC ATC GACAC CATGCAGACCCGCAA prpB 406598 - 407488 + | 2-methylisocitrate lyase TERM 519 407558 - 407516 - f 90 -12.7 -3.32844 | gap 1, opp_overlap 407530 GGTTGTATTCGACAA CCG-ATGCCTGATGCGCCGC TGAC GCGGCTTATCAGGCCTACGG GATGAACTGAACTGT TERM 520 407530 - 407543 + F 74 -9.5 -3.30124 | opp_overlap 407516 ACCGATGCCTGATGC GCCGC TGAC GCGGC TTATCAGGCCTACGG TERM 521 407636 - 407585 - f 90 -12.3 -3.30124 | gap 1, opp_overlap 407623, overlap 407570 407587 407609 CTGTAGGTCGGATAA GACGCAT-AGCGTCGCATCCGACA ACCGA TGCCTGATGCGCCGCTGACGCGGC TTATCAGGCCTACGG TERM 522 407634 - 407587 - f 93 -13.5 -3.21924 | gap 1, opp_overlap 407623, overlap 407570 407585 407609 GTAGGTCGGATAAGA CGCAT-AGCGTCGCATCCGACA ACCGA TGCCTGATGCGCCGCTGACGCG GCTTATCAGGCCTAC TERM 523 407651 - 407609 - f 90 -12.7 -3.32844 | gap 1, opp_overlap 407623, overlap 407570 407587 407585 CGTCGCATCCGACAA CCG-ATGCCTGATGCGCCGC TGAC GCGGCTTATCAGGCCTACGG GGTGAACTGAACTGT TERM 524 407623 - 407636 + F 74 -9.5 -3.30124 | opp_overlap 407587 407585 407609 ACCGATGCCTGATGC GCCGC TGAC GCGGC TTATCAGGCCTACGG TERM 525 407729 - 407678 - f 90 -12.3 -3.30124 | gap 1, opp_overlap 407716, overlap 407663 407680 407702 CTGTAGGTCGGATAA GACGCAT-AGCGTCGCATCCGACA ACCGA TGCCTGATGCGCCGCTGACGCGGC TTATCAGGCCTACGG TERM 526 407727 - 407680 - f 93 -13.5 -3.21924 | gap 1, opp_overlap 407716, overlap 407663 407678 407702 GTAGGTCGGATAAGA CGCAT-AGCGTCGCATCCGACA ACCGA TGCCTGATGCGCCGCTGACGCG GCTTATCAGGCCTAC TERM 527 407744 - 407702 - f 90 -12.7 -3.32844 | gap 1, opp_overlap 407716, overlap 407663 407680 407678 CGTCGCATCCGACAA CCG-ATGCCTGATGCGCCGC TGAC GCGGCTTATCAGGCCTACGG GGCGTGCTGAACTGT TERM 528 407716 - 407729 + F 74 -9.5 -3.30124 | opp_overlap 407680 407678 407702 ACCGATGCCTGATGC GCCGC TGAC GCGGC TTATCAGGCCTACGG TERM 529 407837 - 407795 - f 71 -9.1 -3.32844 | gap 1, opp_overlap 407809, overlap 407773 CGTCGCATCCGACAA CCG-ATGCCTGATGCGCCGC TGAC GCGACTTATCAGGCCTACGG GGTGAACTGAACTGT TERM 530 407864 - 407915 + F 76 -10.1 -3.30124 | gap 1, opp_overlap 407849 407864 407866 407888 CTGTAGGTCGGATAA GACGCAT-GGCGTCGCATCCGACA ACCGA TGCCTGATGCGACGCTGACGCGGC TTATCAGGCCTGCGG TERM 531 407915 - 407864 - f 90 -12.3 -3.30124 | gap 1, opp_overlap 407864, overlap 407849 407866 407888 CTGTAGGTCGGATAA GACGCAT-GGCGTCGCATCCGACA ACCGA TGCCTGATGCGACGCTGACGCGGC TTATCAGGCCTGCGG TERM 532 407913 - 407866 - f 93 -13.5 -3.21924 | gap 1, opp_overlap 407864, overlap 407849 407864 407888 GTAGGTCGGATAAGA CGCAT-GGCGTCGCATCCGACA ACCGA TGCCTGATGCGACGCTGACGCG GCTTATCAGGCCTGC TERM 533 407983 - 407942 - f 72 -9.5 -3.17075 | gap 1, overlap 407957 GCGGGGTGAACTGAA CTGTAGGTCGGATAAGACGC ATA GCGTCGCATCCGACA-ACAA TCTCGACCCTACAAA TERM 534 407969 - 407957 - f 71 -9.1 -3.30124 | overlap 407942 CTGTAGGTCGGATAA GACGC ATA GCGTC GCATCCGACAACAAT prpC 408021 - 409190 + | 2-methylcitrate synthase TERM 535 409426 - 409401 - g 79 -4.5 -5.02074 | overlap 409385 409402 CCAGCCTGTAAAAAA CTGCTGGGGCC AATT GTCCCCGGCAC CGTCGTACCTAACGG prpD 409224 - 410675 + | 2-methylcitrate dehydratase TERM 536 410924 - 410882 - g 72 -9.8 -3.29461 | gap 1, opp_overlap 410881, overlap 410907 410909 CAACTTGTGTCACAA CGCTATCGACCGCTGGCTG GAGAAA CAGCCAGAGG-CGCTGGCG CTGATTGCCGTCTCT prpE 410715 - 412601 + | propionyl-CoA synthetase TERM 537 412637 - 412606 - f 84 -13 -2.60512 | opp_overlap 412614 412615, overlap 412602 412603 TGGAAGAGTAAGGTA TTGTCGGATGCGTC GTGT GGCGCATCCGACAC CGTGCGCCGATGCCT TERM 538 412614 - 412669 + F 71 -8.9 -3.28447 | gap 1, opp_overlap 412606 412602 412603, overlap 412615 412658 TAAGGTATTGTCGGA TGCGTCGTGTGGCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGC-TGACGCG TCTTATCATGCCTAC TERM 539 412615 - 412668 + F 70 -10.2 -2.56747 | gap 1, opp_overlap 412606 412602 412603, overlap 412614 412658 AAGGTATTGTCGGAT GCGTCGTGTGGCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGC-TGACGC GTCTTATCATGCCTA TERM 540 412707 - 412765 + F 73 -9.3 -3.4252 | opp_overlap 412709 412710, overlap 412709 412710 AACCGTAGGTCGGAT AAGGCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGCGCGTC TTATCATGCCTACAG TERM 541 412763 - 412709 - f 100 -16.3 -3.30124 | opp_overlap 412707 412709 412710, overlap 412710 CCGTAGGTCGGATAA GGCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGCGCG TCTTATCATGCCTAC TERM 542 412709 - 412763 + F 85 -11.9 -3.28447 | opp_overlap 412709 412710, overlap 412707 412710 CCGTAGGTCGGATAA GGCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGCGCG TCTTATCATGCCTAC TERM 543 412762 - 412710 - f 100 -19.8 -2.57931 | opp_overlap 412709 412707 412710, overlap 412709 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGCGC GTCTTATCATGCCTA TERM 544 412710 - 412762 + F 93 -15.4 -2.56747 | opp_overlap 412710 412709, overlap 412709 412707 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGCGC GTCTTATCATGCCTA TERM 545 412856 - 412804 - f 79 -11.9 -2.57931 | opp_overlap 412804 412846, overlap 412803 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACC GTGCGCA GATGCCTGATACGACGCTGGCGC GTCTTATCATGCCTA TERM 546 412951 - 412897 - f 76 -10.5 -3.30124 | opp_overlap 412897 412898 412940, overlap 412898 CCGTAGGTCGGATAA GGCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGTGCG TCTTATCATGCCTAC TERM 547 412898 - 412950 + F 79 -11.8 -2.56747 | opp_overlap 412897 412898, overlap 412897 412940 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGTGC GTCTTATCATGCCTA TERM 548 412950 - 412898 - f 86 -14 -2.57931 | opp_overlap 412898 412897 412940, overlap 412897 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACCG TGCGC CGATGCCTGATGCGACGCTGGTGC GTCTTATCATGCCTA TERM 549 413138 - 413086 - f 79 -11.9 -2.57931 | opp_overlap 413086 413128, overlap 413085 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACC GTGCGCA GATGCCTGATACGACGCTGGCGC GTCTTATCATGCCTA TERM 550 413273 - 413329 + F 76 -10.2 -3.30124 | gap 2, opp_overlap 413273 413274 CCGTAGGTCGGATAA GGCGC-TC-GCGTCGCATCCGACACC CCGCGCC GATGCCTGATGCGACGCTGACGCGTC TTATCAGGCCTACCC TERM 551 413329 - 413273 - f 90 -12.4 -3.30124 | gap 2, opp_overlap 413273, overlap 413274 CCGTAGGTCGGATAA GGCGC-TC-GCGTCGCATCCGACACC CCGCGCC GATGCCTGATGCGACGCTGACGCGTC TTATCAGGCCTACCC TERM 552 413326 - 413274 - f 87 -14.1 -2.57931 | opp_overlap 413273, overlap 413273 CGTAGGTCGGATAAG GCGCTCGCGTCGCATCCGACACC CCGCGCC GATGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 553 413918 - 413930 + G 77 -3.3 -5.12707 | TTCCGGTTTACTGAT GACCG TCA CCGTC TTTTTTGGCATTTCG codB 413502 - 414761 + | cytosine transporter TERM 554 414989 - 414970 - g 72 -10 -3.30635 | CAAACCGCCGGACAA CCGAACTG GAAT CAGTCCGG CACGCTGTTTGAAGG TERM 555 415208 - 415228 + G 74 -6.2 -4.50976 | gap 1, opp_overlap 415225, overlap 415211 TTGATCTGCAAATTG TCGCCTTCC CTCA GGAAGG-GA TTTTGTCGTATCCCA codA 414751 - 416034 + | cytosine deaminase cynR 417066 - 416167 - | DNA-binding transcriptional dual regulator TERM 556 416637 - 416591 - G 91 -12.3 -3.72576 | gap 1 CTTTCTGTCAGTAAA GGAATTGCCTCCAGCTCCGGCG AATG CACAGGCGC-GAAGGCAATCCC AACGTCCAACTCGTC TERM 557 417214 - 417241 + G 71 -9.2 -3.54424 | gap 1, overlap 417217 CCTTAAATTCCAGCG CGAGGCATTTCCG AAG CGGGAA-GCCTTG TTTAAACAGCTGGCG cynT 417176 - 417835 + | carbonic anhydrase cynS 417866 - 418336 + | cyanate aminohydrolase TERM 558 418628 - 418657 + G 74 -10.7 -3.16564 | opp_overlap 418631, overlap 418631 GTGAGCTTTACCCCC AAAGTGCGCTGCT GCTT AGCAGCGCACTGC TTGGTGGAGTGGGGA TERM 559 418631 - 418654 + G 100 -16.8 -2.78547 | opp_overlap 418631, overlap 418628 AGCTTTACCCCCAAA GTGCGCTGCT GCTT AGCAGCGCAC TGCTTGGTGGAGTGG TERM 560 418654 - 418631 - g 100 -16.8 -3.57263 | opp_overlap 418631 418628 AGCTTTACCCCCAAA GTGCGCTGCT GCTT AGCAGCGCAC TGCTTGGTGGAGTGG cynX 418369 - 419523 + | putative cyanate transporter TERM 561 419597 - 419560 - T 81 -11.3 -3.20236 | opp_overlap 419564, overlap 419553 419563 TAATGGAAGAGTGAA TTATTGTCGGATGTGCC CAAT GGCGCATCCGACATTTA TTTCAGTGCTAATTT TERM 562 419594 - 419563 - T 85 -13 -2.7898 | opp_overlap 419564, overlap 419560 419553 TGGAAGAGTGAATTA TTGTCGGATGTGCC CAAT GGCGCATCCGACAT TTATTTCAGTGCTAA TERM 563 419564 - 419593 + T 100 -18.7 -4.47183 | opp_overlap 419563 419560 419553 GGAAGAGTGAATTAT TGTCGGATGTGCC CAAT GGCGCATCCGACA TTTATTTCAGTGCTA lacA 420222 - 419611 - | thiogalactoside acetyltransferase TERM 564 420248 - 420279 + r 71 -8.6 -3.45366 | opp_overlap 420258, overlap 420249 CCGTTATGATATGTT GGTCGGATAAGGCG CTCG CGCCGCATCCGACA TTGATTGCTTAAGCG TERM 565 420249 - 420278 + r 79 -12.1 -2.66899 | opp_overlap 420258, overlap 420248 CGTTATGATATGTTG GTCGGATAAGGCG CTCG CGCCGCATCCGAC ATTGATTGCTTAAGC lacY 421541 - 420288 - | lactose/galactose transporter TERM 566 420340 - 420326 - G 70 -7 -4.0942 | GACGCAGTAGAGAAA GCGGAC CGG GGCCGC TAAGCGTGAACACGG TERM 567 421425 - 421388 - G 78 -8.7 -4.24786 | opp_overlap 421388 421390 421406, overlap 421391 GCGAGAACAGAGAAA TAGCAGCAAAAATAATA CCCG TATCACTTTTGCTGATA TGGTTGATGTCATGT TERM 568 421564 - 421586 + r 82 -9 -4.24569 | opp_overlap 421563 421565, overlap 421560 421565 TTCCTTACGCGAAAT ACGGGCAGAC ATG GCCTGCCCGG TTATTATTATTTTTG TERM 569 421585 - 421565 - R 100 -14.7 -3.38046 | opp_overlap 421564 421560 421565, overlap 421563 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT TERM 570 421565 - 421585 + r 83 -12.5 -3.12301 | opp_overlap 421565 421563, overlap 421564 421560 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT lacZ 424667 - 421593 - | beta-D-galactosidase TERM 571 423753 - 423774 + g 83 -10.1 -4.14392 | overlap 423754 ATAGAGATTCGGGAT TTCGGCGCT CCAC AGCGCCGGG TTTTCGACGTTCAGA TERM 572 423754 - 423773 + g 75 -11.4 -3.08314 | overlap 423753 TAGAGATTCGGGATT TCGGCGCT CCAC AGCGCCGG GTTTTCGACGTTCAG TERM 573 424109 - 424119 + g 81 -8.2 -4.37092 | AGCGCAGTACCATCA CCGC GAG GCGG TTTTCTCCGGCGCGT TERM 574 424493 - 424435 - G 85 -13.2 -3.13403 | gap 1, opp_overlap 424421 TCGGCGTCAGGAAGA TCGCACTCCAGCCAGCTTTCCGGCACC GCTTCT GGTGCCGGAAACCAGGC-AAAGCGCCA TTCGCCATTCAGGCT lacI 425872 - 424790 - | DNA-binding transcriptional repressor mhpR 426896 - 425949 - | DNA-binding transcriptional activator, 3HPP-binding TERM 575 426835 - 426812 - G 70 -6 -4.23999 | gap 1, opp_overlap 426826 CTATAGTTAAAACAA CG-TTGTGCAC CTG GTGCACATTCG GGCATGTTTTGATTG TERM 576 426942 - 426919 - H 73 -6 -4.43307 | gap 1, opp_overlap 426933 TTTTTAACAAAATAA GTTGCGCTGTA CTG TGC-GCGCAAC GGCATTTTGTCCGAG mhpA 426973 - 428637 + | 3-(3-hydroxyphenyl)propionate hydroxylase mhpB 428639 - 429583 + | 2,3-dihydroxyphenylpropionate 1,2-dioxygenase TERM 577 430355 - 430367 + G 76 -10.5 -3.33671 | GTCTGCGTCTGCTGT CCGGC ATT GCCGG TTCTGAACTGCATAT mhpC 429586 - 430467 + | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase TERM 578 430604 - 430578 - g 82 -9.5 -4.18494 | gap 1 GATTGGTATTGAAAA CGCTGAAGCGGC CTAC GCCA-TTCAGCG CATCAATGTGCAACA TERM 579 431036 - 431016 - g 70 -4 -4.64766 | gap 1, overlap 431017 431018 GTTAGACCTGAAAAA CTGCGCCAT GAAG ATGACGC-G TAATAACGAAGAGGT mhpD 430477 - 431286 + | 2-keto-4-pentenoate hydratase TERM 580 431567 - 431540 - g 70 -4.1 -4.62069 | opp_overlap 431544 431545 431559, overlap 431544 TGCTCATGTGAAAAA CGATGCCGCTT TGCGCG AAGCGAAACCG GATATTCGCTTAATT TERM 581 431713 - 431727 + G 80 -11.4 -3.33696 | TGGTGGCGGCAGTTT CACGCG TGG CGCGTG TTCATTACGCCGAAA TERM 582 432213 - 432193 - g 74 -2.6 -5.07567 | gap 2, overlap 432195 CGACAGCGGAAAAAA TG-GC-CCAG TCA CTGGCGCGCA AGGCAGGAGAAGCGG mhpF 431283 - 432233 + | acetaldehyde-CoA dehydrogenase II, NAD-binding mhpE 432230 - 433243 + | 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I TERM 583 433291 - 433322 + F 83 -12.2 -3.24708 | overlap 433289 433292 433301 CCATCCCAGCACGAC TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TATATTTCGCCCGTA TERM 584 433292 - 433321 + F 93 -15.7 -2.54504 | overlap 433291 433289 433301 CATCCCAGCACGACT GCCGGATGCGGCG TAAA CGCCTTATCCGGC CTATATTTCGCCCGT TERM 585 433453 - 433473 + G 95 -9 -5.0917 | CATCATCTTCAACCC GCCTGATG CTGAC CATCGGGC TTTGTTTTTTGGTCG TERM 586 433863 - 433894 + G 74 -10 -3.53012 | overlap 433858 ATGTATTGCGGTGTT CCCATTGGCGCGGC GCTG GCGGCGACACTGGG TTTCGCGGGGGCAAA mhpT 433419 - 434630 + | hydroxy-aromatic acid transporter TERM 587 434840 - 434821 - g 81 -4.9 -5.06103 | overlap 434810 434822 AGAACGGCGAAAAAA TCGCGCG TTCAGG CGCGTGA AGCTCGGGCGGCGGT yaiL 434731 - 435270 + | nucleoprotein/polynucleotide-associated enzyme frmB 436228 - 435395 - | S-formylglutathione hydrolase TERM 588 436186 - 436210 + g 70 -3.5 -4.68424 | overlap 436188 AATGCCGATACACAT TTTGCCAGC CGCCAAA GCTGGCATG TTTTTCAATGAGTTC TERM 589 436188 - 436208 + g 74 -8.3 -3.95214 | overlap 436186 TGCCGATACACATTT TGCCAGC CGCCAAA GCTGGCA TGTTTTTCAATGAGT frmA 437429 - 436320 - | alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase frmR 437739 - 437464 - | regulator protein that represses frmRAB operon TERM 590 437815 - 437765 - R 100 -22.4 -3.06302 | gap 1, opp_overlap 437769 437774, overlap 437767 437769 ATCATCTGCATGCAA TATACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTATA TAACACTGGAGAATA TERM 591 437813 - 437767 - R 100 -20.6 -3.08996 | gap 1, opp_overlap 437769 437774, overlap 437765 437769 CATCTGCATGCAATA TACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTA TATAACACTGGAGAA TERM 592 437811 - 437769 - R 100 -18.8 -3.10344 | gap 1, opp_overlap 437769 437774, overlap 437767 437765 TCTGCATGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 593 437769 - 437811 + r 100 -18.8 -2.88544 | gap 1, opp_overlap 437769 437767 437765, overlap 437774 TCTGCATGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 594 437774 - 437806 + r 86 -12.9 -2.88999 | gap 1, opp_overlap 437769 437767 437765, overlap 437769 ATGCAATATACTATA GGGGGGTATGCTAT ATGTCA AT-GCATACCCCCC TATAGTATATAACAC yaiO 438700 - 437927 - | hypothetical protein yaiX 439412 - 438702 - | putative transferase yaiP 440457 - 439261 - | putative membrane-associated glycosyltransferase TERM 595 439679 - 439665 - GR 71 -2.8 -4.87133 | opp_overlap 439653, overlap 439660 439651 AGCGGCTAAATAAAA GCCT TTTATGC AGGC GCATACAGACCGCGT TERM 596 440132 - 440121 - GR 100 -5.8 -5.48825 | CATCACTTAAAAAAA CCTG GTCG CAGG TGGCGTAATTGAGGC TERM 597 440429 - 440410 - GR 100 -10.8 -4.66609 | TAGCGTACTTAAAAA CCATAGCA ACAT TGCTATGG ACATACAGATAAATA yaiS 441138 - 440467 - | hypothetical protein TERM 598 441077 - 441092 + g 71 -3.2 -4.86731 | opp_overlap 441077 441086 GGATGTGCGTCAATA GCAAGG ATAC CCTTTC TTTTATTTGCCGAAG tauA 441747 - 442709 + | taurine transporter subunit ; periplasmic-binding component of ABC superfamily tauB 442722 - 443489 + | taurine transporter subunit ; ATP-binding component of ABC superfamily TERM 599 444147 - 444159 + G 86 -10.5 -3.97308 | CGGCGGAGCTGATTG CCGCG ACG CGCGG TTTGGGTTTTATGGT TERM 600 444214 - 444244 + G 88 -8.2 -4.65933 | GACTGACGTGGTGCT GGCGGGGATCGCGG TGA TTGCGATTATCGCC TTTCTTTTAGAACTG tauC 443486 - 444313 + | taurine transporter subunit ; membrane component of ABC superfamily TERM 601 444485 - 444497 + G 81 -9.1 -4.08767 | CGCAGCAGCAACGCG CGCTG GCC CAGCG TTTTGGCGAGCTGCA tauD 444310 - 445161 + | taurine dioxygenase, 2-oxoglutarate-dependent TERM 602 445191 - 445170 - T 100 -14.5 -3.60792 | GGGGTAAGGGGGAAA TGCCGGGTT GGAT AACCCGGCA TAATGATCATTAACG hemB 446175 - 445201 - | porphobilinogen synthase ECUMN_0410 446701 - 449607 + | Putative flagellin-like structural protein similar to yaiT; putative exported protein TERM 603 449675 - 449646 - f 100 -18.1 -3.76952 | opp_overlap 449649, overlap 449649 GTTATTTAATCTAAA TAATGCCCGTCAA GGAT TTGACGGGCATTA CTGCAAAGGACGCGC TERM 604 449672 - 449649 - g 100 -15.4 -4.01381 | opp_overlap 449649, overlap 449646 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 605 449649 - 449672 + G 100 -15.4 -3.14132 | opp_overlap 449649 449646 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 606 450307 - 450271 - g 82 -11.8 -3.55866 | gap 1, opp_overlap 450283, overlap 450275 CTATATCGAAATGAA TAAAGGCAAACTGGTCG CTAT CAACC-GTTTGCCTTCA GAGTATTAATCAGGA TERM 607 450303 - 450275 - g 90 -10.4 -4.40298 | gap 1, opp_overlap 450283, overlap 450271 ATCGAAATGAATAAA GGCAAACTGGTCG CTAT CAACC-GTTTGCC TTCAGAGTATTAATC yaiV 449648 - 450316 + | hypothetical protein ampH 451474 - 450317 - | beta-lactamase/D-alanine carboxypeptidase TERM 608 450938 - 450952 + g 70 -4.9 -4.55128 | overlap 450929 450928 GGAGTACGCGGCCTG GCTGC CCGGC GCGGC TTTTAGTTTGGCAGT ECUMN_0413 451612 - 451806 + | hypothetical protein sbmA 451826 - 453046 + | transporter involved in cell envelope modification TERM 609 454041 - 454023 - g 72 -6.6 -4.27316 | TTGCCGAAGCGAAAA CGGGGAAA TCA CTACCCCG CGAAATGTTGCCTGG yaiW 453059 - 454153 + | putative lipoprotein TERM 610 454207 - 454165 - T 71 -8.4 -3.48269 | opp_overlap 454162, overlap 454159 GTGATCAAACAGGAA TGTCATGCCAGATAAGGCGT TTT AGGCCCTATCTGGCAAGTAA ATCTTACTGGCGACG yaiY 454519 - 454211 - | conserved hypothetical protein; putative inner membrane protein TERM 611 454292 - 454280 - G 81 -6.2 -4.7373 | GCAGCCTACTAAAAA CGGG ATCAG CCCG AAAATGGTGCCGACA TERM 612 454461 - 454433 - G 77 -8.2 -4.13711 | gap 1, overlap 454436 GCAAAACAGCACAAA CAACGCATAGGCA ATAT TGCC-AGGCGTTG AAGAGGCATTGCGAT yaiZ 454647 - 454991 + | hypothetical protein TERM 613 455005 - 454982 - T 79 -8.2 -4.42851 | opp_overlap 454982 TGAAGAAACTGAAAA CGCCCAAT AACAGAGG ATTGGGCG TTCTGGGAGCTGACA ddlA 456288 - 455194 - | D-alanine-D-alanine ligase A TERM 614 455393 - 455380 - G 70 -4.5 -4.56597 | CTCTGGGGTTAAAAA CACGT CTAC ACGCG CCATGCCTGCGCATC TERM 615 456178 - 456188 + g 75 -6.8 -4.42653 | opp_overlap 456177 456178 GCCCAGCAGCACAAC GTCG AAG CGAC TTTTATCAATGGCAT ECUMN_0419 456366 - 456524 + | hypothetical protein yaiB 456750 - 457010 + | hypothetical protein TERM 616 457053 - 457067 + F 79 -4.2 -5.21459 | overlap 457044 457055 AAAGCTGTCACGGCC GAGACT TAT AGTCGC TTTGTTTTTATTTTT TERM 617 457353 - 457385 + G 77 -3.3 -5.04385 | GACTCGGAAATTACT GCTGCACGCAATT ATGCCGA AGGTGCGGGCGGC TTTTTTAAAGGTATC TERM 618 457464 - 457453 - g 100 -7.2 -5.7946 | CGCTGAATAAAAAAA CCGG CAAA CCGG ACTACGTTACCGACT TERM 619 458343 - 458322 - g 79 -10.1 -3.83026 | gap 1 GCGCCGGACACCAAA GCGCC-GGGC CTC ACCCAGGCGC TAAATACCAAAGATG phoA 457110 - 458525 + | bacterial alkaline phosphatase TERM 620 458530 - 458561 + F 100 -10.8 -5.63374 | opp_overlap 458528 458529 458530, overlap 458531 GGCTGAAATAAAACC GCGCCCGGCAGTGA ATTT TCGCTGTCGGGTGG TTTTTTTGCTGTTAG TERM 621 458531 - 458560 + F 100 -14.3 -3.96398 | opp_overlap 458528 458529 458530, overlap 458530 GCTGAAATAAAACCG CGCCCGGCAGTGA ATTT TCGCTGTCGGGTG GTTTTTTTGCTGTTA psiF 458644 - 458964 + | phosphate starvation-inducible protein TERM 622 458978 - 459011 + F 70 -7.4 -3.86944 | GATACCTGATAGTGC TAACGGGTGAGCTA CGAAAA TGGCTCACCCGAAA TTTCATACTTCTGCC TERM 623 459467 - 459489 + G 86 -12.7 -3.5241 | overlap 459475 459480 459482 TATGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 624 459475 - 459491 + G 81 -10.1 -3.87373 | overlap 459467 459480 459482 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG TERM 625 460189 - 460149 - g 95 -9.9 -4.65182 | gap 3 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC AAAAGTCATCAGGAT yaiC 459066 - 460181 + | putative diguanylate cyclase proC 461007 - 460198 - | pyrroline-5-carboxylate reductase, NAD(P)-binding yaiI 461127 - 461585 + | hypothetical protein TERM 626 461651 - 461667 + F 100 -5.9 -5.64421 | opp_overlap 461651 GGGATGTATTAAAAT TTTCACT TTA AGTGGAA TTTTTTCTTTACAAT aroL 461768 - 462292 + | shikimate kinase II TERM 627 462422 - 462402 - g 71 -3.2 -4.78661 | ATTGAAAAAGGAAAA CCAGGACA GACGG TAACCTGG TACCAACTCAGAGCC yaiA 462342 - 462533 + | hypothetical protein aroM 462791 - 463468 + | hypothetical protein yaiE 463540 - 463824 + | hypothetical protein TERM 628 463830 - 463854 + F 80 -6.3 -4.87273 | overlap 463831 463853 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATGTT TERM 629 463831 - 463853 + F 75 -9.8 -3.51279 | overlap 463830 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATGT ykiA 464032 - 464313 + | hypothetical protein rdgC 465382 - 464471 - | DNA-binding protein, non-specific TERM 630 464932 - 464944 + g 77 -3.3 -5.03314 | overlap 464917 TACGCAGTAATGCCA GCGTA TCT TCCGC TTTTTTGGCACTGGC mak 465507 - 466415 + | manno(fructo)kinase araJ 467742 - 466558 - | putative major facilitator class transporter TERM 631 467276 - 467266 - G 74 -2.4 -5.14163 | AGCGATCAATAAAAA GGTG TAA CGCC AGCTAAATTCCTGAC sbcC 471011 - 467868 - | exonuclease, dsDNA, ATP-dependent TERM 632 468218 - 468232 + g 73 -11.4 -2.77962 | overlap 468217 CAACAACCTCGACTT CCAGCG CCT CGCTGG CTTTGCGCTGTAACA TERM 633 470165 - 470186 + g 87 -5 -5.29445 | GTTGTGCCAGACTGA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 472210 - 471008 - | exonuclease, dsDNA, ATP-dependent TERM 634 471617 - 471633 + g 70 -6.5 -4.25104 | opp_overlap 471616 471612 471617, overlap 471595 CGTGCCAATATAAAT GTCACGC ACG GCGTCAC TTTTACTGGCACCCA TERM 635 471749 - 471763 + g 75 -5.7 -4.67011 | overlap 471749 ATCAGTAATAGCCGC CAGCA AATGC TGCTG TTTTTCAATACCGTT phoB 472400 - 473089 + | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) phoR 473147 - 474442 + | sensory histidine kinase in two-component regulatory system with PhoB TERM 636 474469 - 474490 + F 100 -13.1 -4.88918 | opp_overlap 474472 CATCTTTTATTGCCA TAAGCCAGC CGAT GCTGGCTTA TTTTCTTTGCAGTCA TERM 637 474487 - 474472 - f 76 -10.4 -3.31144 | opp_overlap 474469 CTTTTATTGCCATAA GCCAGC CGAT GCTGGC TTATTTTCTTTGCAG TERM 638 475122 - 475134 + G 72 -6.9 -4.18018 | ACGGTTTGTTACCTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 474849 - 476168 + | branched chain amino acid transporter (LIV-II) TERM 639 476190 - 476213 + F 100 -15.3 -5.64304 | opp_overlap 476193 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 476244 - 477617 + | proline transporter TERM 640 477634 - 477662 + F 89 -14.6 -3.03338 | overlap 477624 CCTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT malZ 477773 - 479590 + | maltodextrin glucosidase TERM 641 479623 - 479674 + F 84 -9.5 -4.27007 | gap 1, overlap 479623 479626 TTACGTCGTTAGTCA C-CAGCCCTGACACTACGCAGC GCAAAAAAA GCTGCTCAATGTCAGGGCTGAG TTTGTTAAATATTTG TERM 642 479623 - 479673 + F 72 -9.7 -3.1512 | overlap 479623 479626 TTACGTCGTTAGTCA CCAGCCCTGACACTACGCAGC GCAAAAAAA GCTGCTCAATGTCAGGGCTGA GTTTGTTAAATATTT TERM 643 479626 - 479670 + F 71 -10 -2.76539 | overlap 479623 479623 CGTCGTTAGTCACCA GCCCTGACACTACGCAGC GCAAAAAAA GCTGCTCAATGTCAGGGC TGAGTTTGTTAAATA TERM 644 481183 - 481196 + G 70 -5.3 -4.43309 | AAAGATATCGCCAAT CATTC CAGC GAATG TTTTACTTACAGTTG ECUMN_0441 479701 - 481248 + | hypothetical protein acpH 481850 - 481269 - | acyl carrier protein phosphodiesterase TERM 645 482382 - 482366 - g 74 -10.1 -3.53091 | overlap 482375 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGCTGCTGGG TERM 646 482605 - 482585 - g 72 -4.6 -4.70659 | gap 1, opp_overlap 482591 482596, overlap 482586 482587 GTTTATAGCGAAAAA CCGGGC-GC GGTT GCAGCCCCG ACCGCTGGTCTGCAT TERM 647 482596 - 482619 + G 70 -6.6 -4.0896 | opp_overlap 482587 482585 482586, overlap 482591 482605 AAAACCGGGCGCGGT TGCAGCCCCG ACCG CTGGTCTGCA TTTTGACGAGCCTTT queA 482069 - 483139 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 648 483126 - 483150 + F 70 -9.9 -2.9162 | opp_overlap 483124, overlap 483124 AGGCAATTAATGAGC GCGTCGGGGAG TAA TTCCGCGGCGC TGGTTTAAAACGTTG TERM 649 483258 - 483274 + G 70 -5.1 -4.33785 | overlap 483255 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 483195 - 484322 + | tRNA-guanine transglycosylase yajC 484345 - 484677 + | SecYEG protein translocase auxillary subunit TERM 650 485266 - 485220 - g 73 -3.8 -4.86731 | opp_overlap 485260, overlap 485223 485224 485226 CGTTCGTAAAGAAAA CAACTACG-GCCTGAGCATCAC TTTCC GCGATGCTAAAGCTCGT-GATG AAGCCATTGCGTATC TERM 651 485799 - 485784 - g 71 -9 -3.54029 | opp_overlap 485778 485775 CTTCACCAAGGACAA CATCGG CAAA CCGATG GCGACCCTGTTTGTG secD 484705 - 486552 + | SecYEG protein translocase auxillary subunit secF 486563 - 487534 + | SecYEG protein translocase auxillary subunit TERM 652 487559 - 487578 + F 100 -10 -5.92337 | opp_overlap 487559 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT TERM 653 487578 - 487559 - f 74 -7.8 -4.11216 | opp_overlap 487559 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT yajD 487663 - 488010 + | hypothetical protein TERM 654 488018 - 488038 + T 83 -11.2 -3.33261 | opp_overlap 488018 AGAAGTGATAAAAAA TGCCGGAT ATGGA ATCCGGCA TTCTCACAATTAGAA TERM 655 488038 - 488018 - T 100 -11.2 -5.3236 | opp_overlap 488018 AGAAGTGATAAAAAA TGCCGGAT ATGGA ATCCGGCA TTCTCACAATTAGAA tsx 488932 - 488048 - | nucleoside channel, receptor of phage T6 and colicin K TERM 656 489225 - 489215 - R 74 -6.8 -4.42386 | opp_overlap 489215 489195, overlap 489194 GCGGGACGCACAAAA TCGC CCC GCGA TACGTTTACTGCATA yajI 489770 - 489231 - | putative lipoprotein TERM 657 489566 - 489609 + g 76 -7.4 -4.29396 | opp_overlap 489582, overlap 489564 489598 489599 CTGGTGTTTTCGCTC CAGGCAGAAGGTAAACCCCA CTGC TGGATTTTGCATTCAGCCTG TTTTGCTGAGTGATT nrdR 489921 - 490370 + | transcriptional repressor of nrd genes ribD 490374 - 491477 + | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase TERM 658 491990 - 491974 - g 70 -6.5 -4.17132 | overlap 491975 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACCGCGCTTGAAAT ribE 491566 - 492036 + | riboflavin synthase beta chain TERM 659 492190 - 492179 - g 70 -5.8 -4.23723 | opp_overlap 492167 492164, overlap 492169 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 660 492318 - 492302 - g 71 -2.9 -4.87665 | opp_overlap 492310, overlap 492303 492306 GGCCAGGTAGAAAAA GCAGTAC TGC GCATTGC GCTGTATGAGCTGTC nusB 492056 - 492475 + | transcription antitermination protein TERM 661 492482 - 492522 + F 100 -9.1 -5.43553 | gap 2, opp_overlap 492501 AAAAAGTGATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCGCGA-TC-GCCGGCC TTTTCTTTTTTACCT TERM 662 493259 - 493272 + G 70 -4.5 -4.47328 | overlap 493260 GCGCACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT thiL 492553 - 493530 + | thiamin-monophosphate kinase pgpA 493508 - 494023 + | phosphatidylglycerophosphatase A TERM 663 494103 - 494084 - T 76 -10 -3.38317 | opp_overlap 494084, overlap 494082 ATTTATAAATGAACA GTGCCCCA ATTT TGAGGCAC TCTGTTAAAGTAAAA ECUMN_0457 495771 - 494200 - | conserved hypothetical protein, putative Pentapeptide repeats domains TERM 664 494789 - 494813 + g 75 -11.5 -2.84504 | overlap 494787 494786 TAAAGTTTCGTGCCT TTCATCCTGAC GAT GTCAGGAAGAA TAGTGTTTGAAAGAT yajO 496976 - 496002 - | aldoketo-oxidoreductase, NADP-binding TERM 665 496450 - 496460 + g 86 -6.8 -4.98255 | CTGACAAACTGCGCC CAGC CGT GCTG TTTTTGTAGTTCCAG dxs 498893 - 497031 - | 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring TERM 666 497204 - 497217 + g 78 -5.2 -4.78237 | CTCCGCTGCCTGCGC CGCC CATAAT GGCG TTTTCTTCTACGGTG TERM 667 497407 - 497420 + g 70 -4.5 -4.56775 | overlap 497408 CGCTTCACAATGCCT TTGCC AATT GGCAG TTTTTCCAGCGGCGT ispA 499817 - 498918 - | geranyltranstransferase xseB 500059 - 499817 - | exonuclease VII small subunit TERM 668 500448 - 500438 - g 77 -6.8 -4.55826 | overlap 500441 CGCAAAAGATGAAAA CCAG CGT CTGG CCATTCGCGACGCCC thiI 500265 - 501713 + | sulfurtransferase required for thiamine and 4-thiouridine biosynthesis TERM 669 501727 - 501750 + T 100 -15.4 -3.55444 | AATTTGTGGTTTTTA CGTCGCATCT GGTC AGATGCGACG TTTGCCGCATCCGCC yajL 502357 - 501767 - | hypothetical protein panE 503231 - 502320 - | 2-dehydropantoate reductase, NADPH-specific TERM 670 503325 - 503271 - H 95 -12.5 -3.61398 | gap 2, opp_overlap 503268 503322 503323, overlap 503272 503320 CCGGGTGTTCAATAA GGC-TATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATACGTC CTGGTGCAGGACTGT TERM 671 503322 - 503272 - H 86 -13.7 -2.76696 | opp_overlap 503268, overlap 503271 503320 CGGGTGTTCAATAAG GCTATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATA-C GTCCTGGTGCAGGAC TERM 672 503323 - 503337 + H 76 -10 -3.38135 | opp_overlap 503271 503320, overlap 503322 ACAATTAAGGGATAC GTCCTG GTG CAGGAC TGTTGGTTATTTAAC yajQ 503399 - 503890 + | putative nucleotide binding protein (UPF0234 protein) yajR 505382 - 504018 - | putative transporter, major facilitator family TERM 673 505212 - 505196 - G 77 -6.5 -4.67234 | overlap 505197 ACGGAATCTGAAAAA CGGCCTG CGT CAGACCA TAAATACCAATGGCA TERM 674 505311 - 505299 - G 74 -7.7 -4.1021 | overlap 505301 CGGCAGAACCATAAA CATGC CCA GCATG CGCAACGAGAATACG TERM 675 505497 - 505510 + r 85 -8.1 -4.65895 | opp_overlap 505497 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAACTGAGAGG TERM 676 505510 - 505497 - R 100 -8.1 -5.4756 | opp_overlap 505497 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAACTGAGAGG cyoE 506421 - 505531 - | protoheme IX farnesyltransferase cyoD 506762 - 506433 - | cytochrome o ubiquinol oxidase subunit IV cyoC 507376 - 506762 - | cytochrome o ubiquinol oxidase subunit III TERM 677 507089 - 507059 - G 72 -7.5 -4.00042 | opp_overlap 507073 TCCGGCACCAAACAA CCAGGTCAACGCC AGCCA GGAGATAACCTGG CTTTTGTTGTTTTTG TERM 678 507073 - 507090 + g 100 -8.4 -5.18715 | opp_overlap 507059 ACCAGGTCAACGCCA GCCAGG AGATAA CCTGGC TTTTGTTGTTTTTGT cyoB 509357 - 507366 - | cytochrome o ubiquinol oxidase subunit I TERM 679 507403 - 507430 + g 76 -9.2 -3.85698 | opp_overlap 507410, overlap 507411 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 680 507411 - 507422 + g 81 -5.8 -4.84529 | opp_overlap 507410, overlap 507403 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC cyoA 510326 - 509379 - | cytochrome o ubiquinol oxidase subunit II TERM 681 510585 - 510565 - R 77 -4.9 -4.90525 | opp_overlap 510568 CAATGCGAAATAAAA CAATTATTT AAC AAATAATTA TCATTAAGGTGACAA TERM 682 510728 - 510777 + r 75 -9 -3.61268 | gap 1, overlap 510729 TAAGCGATGCTGATG T-TTATTTGGCCGTAATAATTAC GGCGA GTGATTACTACGGCTAAATAATA TTTACAGATTACGTC TERM 683 510729 - 510775 + r 100 -14.1 -3.38314 | overlap 510728 AAGCGATGCTGATGT TTATTTGGCCGTAATAATTAC GGCGA GTGATTACTACGGCTAAATAA TATTTACAGATTACG ampG 512261 - 510786 - | muropeptide transporter TERM 684 511413 - 511385 - G 74 -11 -3.1434 | overlap 511373 511383 511382 AAATACCGAAAATCA GCAGCGCCCG GAACAGTGA CAGGCGCTGC ATCAAAATCCCACCG TERM 685 512100 - 512084 - G 71 -2.9 -4.76892 | overlap 512085 512089 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGCGAGAAGAAACCA yajG 512883 - 512305 - | putative lipoprotein bolA 513188 - 513505 + | regulator of penicillin binding proteins and beta lactamase transcription (morphogene) TERM 686 513559 - 513582 + GF 91 -9.6 -4.59984 | opp_overlap 513552 513564, overlap 513564 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 687 513577 - 513564 - gf 95 -9.5 -4.74132 | opp_overlap 513559 513564 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 688 513564 - 513577 + GF 100 -9.5 -5.23292 | opp_overlap 513564, overlap 513559 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 689 513664 - 513649 - gf 90 -6.8 -5.055 | overlap 513651 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 690 513662 - 513651 - gf 72 -7.2 -4.15235 | overlap 513649 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG ECUMN_0475 513439 - 513702 + | hypothetical protein tig 513849 - 515147 + | peptidyl-prolyl cis/trans isomerase (trigger factor) TERM 691 515182 - 515205 + F 100 -12.4 -5.9873 | opp_overlap 515181 515182 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA clpP 515393 - 516016 + | proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases clpX 516142 - 517416 + | ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease TERM 692 517445 - 517473 + F 82 -6.7 -4.88711 | opp_overlap 517450, overlap 517450 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 693 517450 - 517468 + F 90 -11 -4.3623 | opp_overlap 517450, overlap 517445 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 694 517468 - 517450 - f 91 -8.8 -4.88407 | opp_overlap 517450 517445 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 695 518550 - 518537 - g 77 -3.1 -5.10029 | gap 1, overlap 518527 518539 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 696 518555 - 518539 - g 82 -9.4 -4.17355 | overlap 518527 518537 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 697 518897 - 518886 - g 70 -4.4 -4.45485 | opp_overlap 518879 ATGAGATCGACAAAA TGTC TTCT GACA TGCGTGGCGATCCGG lon 517604 - 519958 + | DNA-binding ATP-dependent protease La TERM 698 520023 - 519988 - f 77 -4.6 -5.14163 | opp_overlap 519991, overlap 519990 519991 ATGCACTAATAAAAA CAGGGCTGGCAGGC TAATTCGG GCTTGCCAGCCTTT TTTTGTCTCGCTAAG TERM 699 520021 - 519990 - f 74 -7.2 -4.19587 | opp_overlap 519991, overlap 519988 519991 GCACTAATAAAAACA GGGCTGGCAGGC TAATTCGG GCTTGCCAGCCT TTTTTTGTCTCGCTA TERM 700 519991 - 520020 + F 100 -13.6 -5.72616 | opp_overlap 519990 519988 519991 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT TERM 701 520020 - 519991 - f 76 -10.7 -3.10668 | opp_overlap 519991, overlap 519990 519988 CACTAATAAAAACAG GGCTGGCAGGC TAATTCGG GCTTGCCAGCC TTTTTTTGTCTCGCT hupB 520167 - 520439 + | HU, DNA-binding transcriptional regulator, beta subunit TERM 702 520475 - 520494 + F 100 -10 -5.7827 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT TERM 703 522420 - 522389 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ppiD 520631 - 522502 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 704 522545 - 522572 + F 75 -10.6 -2.93447 | opp_overlap 522546 522551, overlap 522551 TTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 705 522571 - 522546 - f 89 -11.9 -3.63515 | opp_overlap 522545 522551, overlap 522551 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 706 522551 - 522566 + F 79 -8.2 -4.39571 | opp_overlap 522546 522551, overlap 522545 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 707 522566 - 522551 - f 81 -6 -4.89477 | opp_overlap 522551 522545, overlap 522546 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA ybaV 522653 - 523024 + | hypothetical protein ybaW 523118 - 523516 + | hypothetical protein queC 524263 - 523568 - | queuosine biosynthesis protein TERM 708 523892 - 523918 + g 82 -9.4 -4.21194 | GGAGAAATCCGTTTC GCAGACGCCG GTAATTA CGGCTTCTGC TTTTACCTGATACGC TERM 709 524303 - 524289 - R 91 -8.6 -4.89477 | GCTTGAACAATAAAA GCGTTA TGG TAACGC CTGCGATTAACCCGG ybaE 526028 - 524328 - | hypothetical protein TERM 710 524676 - 524694 + g 79 -2.2 -5.1925 | overlap 524677 524678 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 711 525607 - 525623 + g 76 -10.8 -3.33261 | opp_overlap 525618 525620 TGCTGCTCGGCACGG CCGGGC AAAAA GCCCGG TTGTAGCGGTTCGAG TERM 712 526551 - 526540 - g 95 -5.8 -5.44119 | overlap 526541 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 526128 - 526946 + | thiamin pyrimidine pyrophosphate hydrolase TERM 713 526964 - 526979 + F 100 -8.2 -5.86332 | overlap 526965 AGATCCCTTCCAGCA TCGGGC AATT GCCCGG TTTTTTTTGCGTTGA TERM 714 526965 - 526978 + F 81 -9.5 -4.10173 | overlap 526964 GATCCCTTCCAGCAT CGGGC AATT GCCCG GTTTTTTTTGCGTTG TERM 715 527086 - 527072 - f 71 -4.3 -4.6008 | overlap 527084 AAAATAGAATTAAAA GAGAA AAAAA TTCTC CGTGGAAGGGCTATG TERM 716 527290 - 527277 - g 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG ybaO 527099 - 527557 + | putative DNA-binding transcriptional regulator with homology to Lrp mdlA 527587 - 529359 + | putative fused ATPase and permease component of metabolite transporter mdlB 529352 - 531133 + | putative fused ATPase and permease component of metabolite ABC transporter TERM 717 531170 - 531193 + F 90 -8.9 -4.68645 | opp_overlap 531170 531165 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC glnK 531314 - 531652 + | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB TERM 718 531824 - 531837 + G 70 -5.9 -4.15453 | overlap 531835 TGTTTATGACTATTC CGGGG ATTG CCCTG TTTTACGGTGGGTTG amtB 531682 - 532968 + | ammonium transporter TERM 719 532985 - 533011 + T 100 -7.3 -5.68023 | gap 1, opp_overlap 532985 532987, overlap 532987 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 720 533011 - 532985 - T 93 -9.5 -5.07053 | gap 1, opp_overlap 532985 532987, overlap 532987 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 721 532987 - 533009 + T 89 -9.9 -4.46828 | gap 1, opp_overlap 532985 532987, overlap 532985 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT TERM 722 533009 - 532987 - T 84 -9.9 -4.15748 | gap 1, opp_overlap 532987 532985, overlap 532985 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT tesB 533877 - 533017 - | acyl-CoA thioesterase II TERM 723 533907 - 533897 - H 72 -6.8 -4.24342 | overlap 533898 CTCTCCAGTAACAAA GCTG CCG CAGC AAGCCAAAGTGAGTT ybaY 534095 - 534667 + | putative lipoprotein TERM 724 534674 - 534701 + T 89 -15 -2.71364 | opp_overlap 534668 534678, overlap 534678 CAATATTAAGCGCAG TTAACCCTCTCC GCCC GGAGAGGGTTAG TAGTTCCAGCGATAA TERM 725 534678 - 534697 + T 93 -13.6 -3.27298 | opp_overlap 534668 534678, overlap 534674 ATTAAGCGCAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG TERM 726 534697 - 534678 - T 87 -13.6 -3.08173 | opp_overlap 534678 534674, overlap 534668 ATTAAGCGCAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG ybaZ 535087 - 534698 - | putative methylated DNA-protein cysteine alkyltransferase ybaA 535388 - 535741 + | hypothetical protein ylaB 537333 - 535783 - | conserved hypothetical protein; putative inner membrane protein TERM 727 536201 - 536219 + g 80 -5.2 -5.02074 | TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA ylaC 537967 - 537497 - | conserved hypothetical protein; putative inner membrane protein TERM 728 537608 - 537594 - G 77 -11.4 -3.13403 | opp_overlap 537585, overlap 537592 TGTTCTTTATGAACA TCCGCG ACA CGCGGA GAGTTCAAGATGGCT maa 538634 - 538083 - | maltose O-acetyltransferase hha 539024 - 538806 - | modulator of gene expression, with H-NS ybaJ 539424 - 539050 - | hypothetical protein TERM 729 539950 - 539935 - R 100 -11.8 -5.28176 | opp_overlap 539935 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT TERM 730 539935 - 539950 + r 83 -11.8 -3.27476 | opp_overlap 539935 GTTATGCATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT acrB 543119 - 539970 - | multidrug efflux system protein TERM 731 541290 - 541311 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 732 542993 - 543032 + g 100 -15.8 -3.57144 | AGGCGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 544335 - 543142 - | multidrug efflux system TERM 733 544306 - 544324 + g 93 -6 -5.17744 | opp_overlap 544302 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 544477 - 545124 + | DNA-binding transcriptional repressor TERM 734 545547 - 545534 - g 70 -3.7 -4.62783 | overlap 545517 CAGCTACGGCAAAAA GTCGC TGAA GCGCC GGAAAAAATGCGCCA TERM 735 546068 - 546054 - g 79 -4.2 -5.15969 | overlap 546032 CTTTAACCGAAAAAA CGGC GCAGGAA GCCG TCTCCCCGGATGAAG TERM 736 547088 - 547078 - g 93 -8.2 -4.85599 | GGTACTGGAGAAAAA CGGC GTT GCCG TGCGTCACTTTGGTA kefA 545252 - 548614 + | fused conserved hypothetical protein ; mechanosensitive channel protein TERM 737 548621 - 548648 + T 100 -12.8 -5.19261 | opp_overlap 548621 548625 GTAGGGTAAGGACAA TAAAGGGCGACA GTGA TGCCGCCCTTTA TTTTTTACTCGCTTT TERM 738 548648 - 548621 - T 100 -15 -3.51825 | opp_overlap 548621, overlap 548625 GTAGGGTAAGGACAA TAAAGGGCGACA GTGA TGCCGCCCTTTA TTTTTTACTCGCTTT TERM 739 548644 - 548625 - T 93 -11.4 -4.3953 | opp_overlap 548621, overlap 548621 GGTAAGGACAATAAA GGGCGACA GTGA TGCCGCCC TTTATTTTTTACTCG ybaM 548817 - 548653 - | hypothetical protein TERM 740 548830 - 548852 + r 70 -9.8 -2.88603 | overlap 548829 548826 CATACTCTCTCCATT GCTAGCGGGT TAA GCGCGCTAGC CTGTTTTCGATTTTT priC 549358 - 548831 - | primosomal replication protein N'' ybaN 549428 - 549805 + | conserved hypothetical protein; putative inner membrane protein apt 549958 - 550509 + | adenine phosphoribosyltransferase TERM 741 550561 - 550585 + F 71 -9.9 -3.09492 | opp_overlap 550510, overlap 550561 550563 550579 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 742 551880 - 551860 - g 74 -10.4 -3.53224 | overlap 551861 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 743 551961 - 551934 - g 76 -10.5 -3.36112 | gap 1 GCAAAAAAGAGTGAA CCGGCAGC-CGC TACCC GCGCGCGGCCGG TGAATAACGCTGCGC TERM 744 552118 - 552102 - g 75 -4.3 -4.7497 | overlap 552105 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTAAAAAA TERM 745 552115 - 552105 - g 77 -6.8 -4.4831 | overlap 552102 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTAAA TERM 746 552170 - 552154 - g 93 -6.5 -5.27779 | TGGAACATGAAAAAA CGCCG GAACTGG CGGCG AAGCTGGCGGCAGAA TERM 747 552315 - 552273 - g 71 -9.1 -3.56594 | opp_overlap 552282 552288 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 748 552485 - 552468 - g 95 -6.9 -5.17744 | opp_overlap 552468 552465 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 550638 - 552569 + | DNA polymerase III/DNA elongation factor III, tau and gamma subunits TERM 749 552571 - 552587 + F 78 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC TERM 750 552695 - 552683 - g 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA ybaB 552622 - 552951 + | hypothetical protein TERM 751 553031 - 552987 - g 72 -10.6 -3.07622 | gap 1, overlap 552977 552990 ACACAGCTTATGGAA GCACTGCGCTGTCTACCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 752 553028 - 552990 - g 81 -13.1 -2.75382 | gap 1, overlap 552987 CAGCTTATGGAAGCA CTGCGCTGTCTACCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 753 553371 - 553360 - g 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAACC recR 552951 - 553556 + | gap repair protein TERM 754 553556 - 553591 + F 71 -10.4 -2.79135 | opp_overlap 553547 553562, overlap 553555 553565 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG ATCA CCTGCTCTCGCTTGAA ATTATTCCCCCTTGT TERM 755 553585 - 553562 - f 100 -16.8 -3.90112 | opp_overlap 553556 553555 553565, overlap 553547 TCGTTTTTAAGCAAA CGAGAGCAGG ATCA CCTGCTCTCG CTTGAAATTATTCCC TERM 756 553565 - 553582 + F 77 -11.3 -2.55818 | opp_overlap 553562, overlap 553556 553555 TTTTTAAGCAAACGA GAGCAGG ATCA CCTGCTC TCGCTTGAAATTATT TERM 757 554127 - 554107 - g 100 -12.7 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAAC GGT GTTTTCTGG GAATCGGCTGGTGAA TERM 758 554792 - 554776 - g 81 -7.3 -4.60487 | overlap 554778 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 759 554790 - 554778 - g 72 -7.7 -3.91506 | overlap 554776 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 553666 - 555540 + | molecular chaperone HSP90 family TERM 760 555573 - 555546 - f 93 -15.7 -3.05384 | opp_overlap 555546 GGTTTCCTGATGTAA TGCCGGATGAC CTTCGT GTCATCCGGCA TTTTTCTTTTCATCA TERM 761 555546 - 555573 + F 100 -15.7 -5.50723 | opp_overlap 555546 GGTTTCCTGATGTAA TGCCGGATGAC CTTCGT GTCATCCGGCA TTTTTCTTTTCATCA adk 555721 - 556365 + | adenylate kinase TERM 762 557427 - 557382 - g 76 -4.1 -5.00616 | overlap 557384 557388 GCGGGCGGGAAAAAA TATGAATATATTCCGGCGC TTAATGCC ACGCCGGAACATATCGAGA TGATGGCTAATCTTG TERM 763 557425 - 557384 - g 70 -6.7 -4.13561 | overlap 557382 557388 GGGCGGGAAAAAATA TGAATATATTCCGGCGC TTAATGCC ACGCCGGAACATATCGA GATGATGGCTAATCT TERM 764 557421 - 557388 - g 77 -9.7 -3.66995 | overlap 557384 557382 GGGAAAAAATATGAA TATATTCCGGCGC TTAATGCC ACGCCGGAACATA TCGAGATGATGGCTA hemH 556497 - 557459 + | ferrochelatase aes 558415 - 557456 - | acetyl esterase TERM 765 557484 - 557508 + g 70 -5.7 -4.3129 | gap 1, opp_overlap 557481, overlap 557482 GTAAAGAACTGAGCG CCGTCG-CGA AGAGCC TCGTCGGCGG TTTTCATCATCCGTG TERM 766 559498 - 559477 - g 78 -7.9 -4.37198 | opp_overlap 559484 AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG CGCTATAGCGGAATT gsk 558567 - 559871 + | inosine/guanosine kinase TERM 767 559889 - 559920 + T 84 -8.6 -4.3586 | opp_overlap 559899 559900, overlap 559890 559899 559900 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTTGCTCTCAATGC TERM 768 559890 - 559919 + T 83 -12.1 -3.21034 | opp_overlap 559899 559900, overlap 559889 559899 559900 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTTGCTCTCAATG ybaL 561677 - 560001 - | putative monovalent cation:proton antiporter (CPA2 family) TERM 769 561911 - 561879 - R 86 -10.6 -4.13945 | opp_overlap 561869, overlap 561882 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 770 561908 - 561882 - R 93 -15.3 -3.09831 | opp_overlap 561869, overlap 561879 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT fsr 563135 - 561915 - | fosmidomycin efflux system, member of the major facilitator superfamily TERM 771 562233 - 562221 - G 81 -10.5 -3.66424 | TAAAATCAGCGTAAA CGGCG CAA CGCCG AGGATAGAGCCCCAA TERM 772 563101 - 563116 + g 72 -6.8 -4.23045 | gap 1, overlap 563100 563101 GTTGACGCAGCCGCG CCC-GCC ACA GGCTGGG TTTGTTCACTCATTG ushA 563353 - 565005 + | bifunctional UDP-sugar hydrolase and 5'-nucleotidase TERM 773 565036 - 565013 - T 100 -16.8 -3.67976 | opp_overlap 565006 565011 565009, overlap 565006 GGCAGTAATCCGAAA GTGCCGGATG TTCG CATCCGGCAC AATGCTTAATCGCGG ybaK 565521 - 565042 - | hypothetical protein TERM 774 565180 - 565191 + g 79 -2.2 -5.24129 | GGGGGCGTCGATAAT CGTT GGCA GACG TTTTTTCTGCCCCAG ECUMN_0521 565812 - 565537 - | hypothetical protein TERM 775 565698 - 565719 + gr 95 -7.3 -5.40072 | overlap 565699 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAACGCAAC TERM 776 565699 - 565718 + gr 85 -10.8 -3.83561 | overlap 565698 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAACGCAA ybaP 566519 - 565725 - | hypothetical protein TERM 777 566321 - 566340 + gr 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG TERM 778 566679 - 566650 - R 100 -14.3 -3.30338 | opp_overlap 566647 566674, overlap 566668 ATAATTTCCCTATAA CGGATGCGCCACC CTAA AGCAGCGCATCCG CAATGATGTACTTAT copA 569195 - 566691 - | copper transporter TERM 779 567994 - 567953 - G 72 -8.7 -3.78778 | gap 1, overlap 567946 GCACCATACGAATAA TCCGCGACAGCGTGGTATGG CTG CCA-ACCGCACTGGCACGAA ACAGCACACTGCCGT TERM 780 568178 - 568191 + g 91 -3.1 -5.47399 | gap 1, opp_overlap 568165, overlap 568178 568179 TACCTGGCTGAACAT C-TGCC AGC GGCACG TTTTTTTCACCTTCG TERM 781 569399 - 569387 - H 71 -7.7 -3.75153 | overlap 569390 GGGTGCTAAGTTAAA TCAGG ATG CCTGA AAATCGGCACCGGGG ybaS 569458 - 570390 + | amidase, possibly glutaminase ybaT 570393 - 571685 + | putative nitrogen-containing metabolite transporter TERM 782 571696 - 571720 + F 87 -10 -4.40184 | overlap 571695 571697 TATAACACCTCTCTG TGCGCAGTAC TTCCT GTACTGCGCC TTTGTCTTTAATTCA TERM 783 571697 - 571719 + F 93 -13.5 -3.23026 | overlap 571695 571696 ATAACACCTCTCTGT GCGCAGTAC TTCCT GTACTGCGC CTTTGTCTTTAATTC TERM 784 572966 - 572992 + G 81 -10 -3.86346 | opp_overlap 572956, overlap 572967 TACAACTGAACGTTA ACGCGCCGCTGT ATC AGGGCGGCGCGG TTTCTGCCCAGGTGC TERM 785 572967 - 572991 + G 82 -13.5 -2.91593 | opp_overlap 572956, overlap 572966 ACAACTGAACGTTAA CGCGCCGCTGT ATC AGGGCGGCGCG GTTTCTGCCCAGGTG siiCA 572023 - 573378 + | outer membrane transport protein, type I secretion TERM 786 574460 - 574442 - g 76 -7.4 -4.24002 | overlap 574446 CGCTAAACGGCAAAA CCTACACC ACC AGCGTAGG CGCTAACGGTGCCTG TERM 787 574766 - 574751 - g 72 -10.4 -3.34109 | overlap 574747 AAAGCCATACAGCAA CCGTCG GTAG CGACGG AACCTGGCAAGTGAC TERM 788 575272 - 575243 - g 84 -13.7 -2.66316 | overlap 575240 CTGGCGATGACATTA TCAGTGGCGCA GAAAAAGG TGCGCCACTGA CCCTTACCGGTAGCA TERM 789 575575 - 575559 - g 77 -12.3 -2.72461 | overlap 575558 CAACGCCGCCGAAAG TGGGCAG GAT CTGCCCA TCACCGGCACCACCG TERM 790 576658 - 576648 - g 70 -4.6 -4.45544 | GGTCACCAATCAAAA CGGC AAC ACCG GCAGCGGCACGCGGG TERM 791 578066 - 578037 - g 70 -7.2 -4.14392 | gap 1, overlap 578042 GCTGAACGGGCAAAA TTACACTGCGACG ACGGA CGCCGCAG-GCAA CTGGAGCACCACGGT TERM 792 578858 - 578819 - g 74 -10.7 -3.14051 | overlap 578817 578844 578845 CGATCTCCATTAACA CCGTTTCCGGCGACGAT GTGATT AACGCCGCCGAAAAAGG GGCAGATTTAACCCT TERM 793 579084 - 579105 + G 77 -10.1 -3.66178 | GACCCACGCCTACAG CGTCGATGC CACG GCACCGACG TTTGCCATTAACACC TERM 794 580150 - 580130 - g 83 -13.3 -3.01712 | opp_overlap 580129 CGCTGGGTGGCAACA CCTACACCG CCA CGGTGCAGG CTAATTTAAGCTGGA TERM 795 582953 - 582940 - g 78 -9.5 -3.91897 | GCGGTCAGCGACAAA GCCGG AAAT CCGGC CTCGGCGACGCATAA TERM 796 585156 - 585142 - g 73 -3.5 -4.73388 | AACGCCGATGAAAAA GGCCA GCCGT TGACC ATTAGCGGTAGCAGT TERM 797 588299 - 588319 + G 70 -11.1 -2.73124 | opp_overlap 588291, overlap 588298 CCAATAACGGCTACA CCCTGACCG CCA CGGTCAGCG ATTTGGCGGGTAACC TERM 798 590549 - 590522 - g 72 -7 -4.25104 | overlap 590523 CGCTGGCGAGCAAAA CCATCGCCATTG CGGG CATTAGCGATGA CACCGGGTTAAGCAG TERM 799 590822 - 590802 - g 70 -6.2 -4.2803 | gap 1, overlap 590803 GACCGCAACGCAAAA CGTGGTGGT CGAC ACCACCA-G CCCGGAAGCGGCGAA TERM 800 591466 - 591437 - g 74 -7.9 -4.07568 | gap 1, overlap 591459 CGGTGGTGTCGAAAA CGGTGGTGGTCGAT ACG ATTAACC-CCACCG CGACGCCGACCATTG TERM 801 591551 - 591568 + G 73 -11.3 -2.62184 | opp_overlap 591548 591551 CCACCGACGACACTA CGCCGTT GCTG AACGGCG TGCTCTCCGGCCCGC TERM 802 591568 - 591551 - g 73 -11.3 -2.66964 | opp_overlap 591551, overlap 591548 CCACCGACGACACTA CGCCGTT GCTG AACGGCG TGCTCTCCGGCCCGC siiEA 573487 - 594264 + | adhesin for cattle intestine colonization TERM 803 594656 - 594623 - g 85 -8.7 -4.4648 | overlap 594624 ATGTTGAGGATAAAA TCGTTGAACTGGCGC TACT GCGCCCGCTCAGCGC CATCCCTGACGCGCG TERM 804 594655 - 594624 - g 81 -12.2 -3.27406 | overlap 594623 TGTTGAGGATAAAAT CGTTGAACTGGCGC TACT GCGCCCGCTCAGCG CCATCCCTGACGCGC TERM 805 594704 - 594686 - g 71 -11 -2.84634 | opp_overlap 594685 GGGTAGATGACTATA TTCGCCCG TAT CAGGCGAA CTGGTTCTGGAGCCT TERM 806 594901 - 594923 + G 76 -10.6 -3.40112 | overlap 594899 ATCCTGTTTGAGTTC TGTATGCGCA TGG TGCGCACACA TCTTTCGGATGTGAT TERM 807 595754 - 595733 - g 71 -3 -4.80656 | ATGAAGAAGAGAAAA TTGCCGAT GTGGCG ATTGGCAA ACTCAACATTCAGGC TERM 808 596198 - 596182 - g 70 -10.1 -3.14132 | GTGCTGCTCGATGAA CCCAGCG CCT CGCTGGA CGAAATGGCGGAAGC siiBA 594268 - 596430 + | type I secretion membrane protein, ATP binding protein, protein export siiDA 596427 - 597602 + | RtxD/HlyD/CyaD protein of type I secretion system TERM 809 597642 - 597624 - g 73 -3.8 -4.7497 | GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCCATTCGCTTCTA cueR 597599 - 598006 + | DNA-binding transcriptional activator of copper-responsive regulon genes ECUMN_0531 598213 - 598010 - | hypothetical protein ECUMN_0532 598632 - 598210 - | hypothetical protein TERM 810 598435 - 598447 + g 75 -5.5 -4.67353 | GGCCTGGGCATGTTG TGCGG CTT CTGCA TTTTTAAATGCCTGC ECUMN_0533 600488 - 598686 - | putative adhesin/invasin-like protein TERM 811 599592 - 599609 + g 72 -4.9 -4.70583 | gap 1 GTCAGCCGTTGACTG GGC-ATGT GCG ACATCGCC TTTTATGTTGGTGAC TERM 812 599794 - 599804 + g 71 -3.2 -4.84363 | overlap 599788 TCCTGCCCGTTGTCG CGGA CGA TCTG TTTTTGCTCGTTTGA TERM 813 599961 - 599978 + g 72 -4.9 -4.70583 | gap 1 GTCAGCCGTTGACTG GGC-ATGT GCG ACATCGCC TTTTATGTTGGTGAC ECUMN_0534 600837 - 601199 + | hypothetical protein TERM 814 601323 - 601270 - T 74 -11 -2.56747 | gap 1, opp_overlap 601270 601313, overlap 601267 601269 601302 601303 601321 CAGGCATGATAAGAC GCGCCCGCGCCGCATCAGGC-ATCA GCGCA TAACCGCCGGATGCGGCGTAAACGC CTTATCCGGCCTACA TERM 815 601334 - 601303 - T 70 -10 -2.60212 | opp_overlap 601270 601313, overlap 601270 601269 601302 601321 GCATCAGCGCATAAC CGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACAATTCGGGCATA TERM 816 601380 - 601367 - T 76 -8.1 -4.2828 | overlap 601321 601369 601370 TTGTAGGCATGAAAA GACGC GTCA GCGTC GCATCAGGCGATGAC ybbJ 601839 - 601384 - | conserved hypothetical protein; putative inner membrane protein ybbK 602756 - 601839 - | putative protease, membrane anchored TERM 817 602637 - 602660 + g 74 -9.7 -3.47078 | GAGCCCCGGCTGTAA CGTTTTGGT ATAGCG ACCAAAACG TTCTACTGTCCACTG ybbL 602902 - 603579 + | putative transporter subunit: ATP-binding component of ABC superfamily ybbM 603566 - 604345 + | putative permease of an ABC transporter TERM 818 604374 - 604343 - T 80 -7.3 -4.4846 | opp_overlap 604348 604351, overlap 604344 604346 604347 604351 CAATTGAAGAAGAAA TGATGCAATGCCG GATGCG CAGCATCGCATCC GGCGTTGTGGTTCAT TERM 819 604373 - 604344 - T 80 -10.8 -3.27992 | opp_overlap 604348 604351, overlap 604343 604346 604347 604351 AATTGAAGAAGAAAT GATGCAATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA TERM 820 604383 - 604346 - T 72 -9.8 -3.19055 | opp_overlap 604348 604351, overlap 604344 604343 604347 604351 TTGAAGAAGAAATGA TGCAATGCCGGATGCG CAGCAT CGCATCCGGCGTTGTG GTTCATGTGCCGATC TERM 821 604382 - 604347 - T 84 -13.3 -2.5071 | opp_overlap 604348 604351, overlap 604344 604343 604346 604351 TGAAGAAGAAATGAT GCAATGCCGGATGCG CAGCAT CGCATCCGGCGTTGT GGTTCATGTGCCGAT TERM 822 604348 - 604381 + T 100 -19 -2.81547 | opp_overlap 604344 604343 604347 604346 604351, overlap 604351 GAAGAAGAAATGATG CAATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA TERM 823 604378 - 604351 - T 86 -12.7 -3.18869 | opp_overlap 604348 604351, overlap 604344 604343 604347 604346 GAAGAAATGATGCAA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC TERM 824 604351 - 604378 + T 100 -14.9 -3.55487 | opp_overlap 604344 604343 604351 604347 604346, overlap 604348 GAAGAAATGATGCAA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC TERM 825 604452 - 604429 - T 95 -12.4 -3.57629 | CAACAACGCATATAA CTGGCGGCGA TACT TCGACGCCAG CGCATCACCCGTACC ybbN 605262 - 604408 - | putative thioredoxin domain-containing protein ybbO 606132 - 605323 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain tesA 606748 - 606122 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 826 606682 - 606662 - GH 79 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCG GCGG-CACG GAAGGTTAACAGGAC TERM 827 606963 - 606992 + GH 75 -5.7 -4.72386 | gap 1, opp_overlap 606957 606956 ACGAAGAAGCGCGGG CAAAGTTG-CGCGC GAA GCACGTCGGCTTTG TTTTTCAGTCATTTA ybbA 606716 - 607402 + | putative transporter subunit: ATP-binding component of ABC superfamily TERM 828 607879 - 607889 + G 77 -8.2 -4.11484 | opp_overlap 607879 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAACCCCTTCCA TERM 829 609722 - 609736 + G 73 -11.4 -2.68532 | overlap 609715 609720 GGATTGTTCTGCCGT GCAGCG GTG CGCTGC TGCTGTCGCTTTGCG ybbP 607399 - 609813 + | putative ABC transporter permease TERM 830 610012 - 609988 - T 100 -15.8 -3.53012 | opp_overlap 609988 GTCGGTTTTTTTAAA GGCCGAAGGT GGTAA ACCTTCGGCC TTAGCTACGTTTCCT TERM 831 609988 - 610012 + T 100 -15.8 -3.11999 | opp_overlap 609988 GTCGGTTTTTTTAAA GGCCGAAGGT GGTAA ACCTTCGGCC TTAGCTACGTTTCCT TERM 832 610322 - 610357 + T 78 -10.7 -3.16203 | opp_overlap 610324 610332, overlap 610320 610324 610332 GTCTTGGGCGGAAAA AATAAAAAAACCGAC TGTCAT GTCGGTTTTTTTATA TCTGTATTCTGGTGC TERM 833 610355 - 610324 - T 100 -13.3 -5.00616 | opp_overlap 610322 610320 610324 610332, overlap 610332 CTTGGGCGGAAAAAA TAAAAAAACCGAC TGTCAT GTCGGTTTTTTTA TATCTGTATTCTGGT TERM 834 610324 - 610355 + T 91 -13.3 -3.13593 | opp_overlap 610324 610332, overlap 610322 610320 610332 CTTGGGCGGAAAAAA TAAAAAAACCGAC TGTCAT GTCGGTTTTTTTA TATCTGTATTCTGGT TERM 835 610332 - 610347 + T 100 -6.1 -5.77988 | opp_overlap 610324 610332, overlap 610324 610322 610320 GAAAAAATAAAAAAA CCGAC TGTCAT GTCGG TTTTTTTATATCTGT TERM 836 610347 - 610332 - T 100 -6.1 -6.28401 | opp_overlap 610332 610324 610322 610320, overlap 610324 GAAAAAATAAAAAAA CCGAC TGTCAT GTCGG TTTTTTTATATCTGT ybbB 611512 - 610418 - | tRNA 2-selenouridine synthase, selenophosphate-dependent TERM 837 610892 - 610905 + g 72 -4.5 -4.70879 | CCACAGGCGCAGCTC CTGAC GGGC GTCGG TTTTTAGCATTTCGG ybbS 612507 - 611581 - | putative DNA-binding transcriptional activator of the allD operon TERM 838 612529 - 612544 + H 71 -4 -4.82819 | gap 1, opp_overlap 612529, overlap 612531 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG allA 612737 - 613219 + | ureidoglycolate hydrolase allR 613297 - 614112 + | DNA-binding transcriptional repressor TERM 839 614125 - 614142 + F 100 -12.7 -5.40474 | TAGTGTCTGTCGCAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT gcl 614202 - 615983 + | glyoxylate carboligase hyi 615996 - 616772 + | hydroxypyruvate isomerase glxR 616872 - 617750 + | tartronate semialdehyde reductase, NADH-dependent TERM 840 617793 - 617766 - f 93 -9.3 -5.07486 | gap 1 TACCCGCAATAAAAA TGGCCGATATCA GAAAA TGA-ATCGGCCA GCAATATTAAAAAAA TERM 841 617835 - 617848 + F 89 -2.5 -5.67711 | overlap 617835 617838 AAGATGTTGCTTCAG TATTA AAAA TAATA TTTTTATTTTATTTG TERM 842 617838 - 617854 + F 79 -5.3 -5.12172 | overlap 617835 617835 ATGTTGCTTCAGTAT TAAAAAT AAT ATTTTTA TTTTATTTGTTCCTC TERM 843 618702 - 618678 - g 72 -7.1 -4.1899 | CGACTTTACGCAAAA CGCCCACTC GTTTCGT GAGCAGGCG CTGGGGCAAACGCTC ybbW 617920 - 619374 + | allantoin or uracil transporter TERM 844 619694 - 619680 - g 83 -10 -4.11216 | CGCGCAGCGGCAAAA GGTGGT ATC ACCACC ATGATCGAAATGCCG TERM 845 620577 - 620565 - g 72 -4.7 -4.72272 | GGTCTGCAGCAAAAA GGCCG TAT CGCCC CAGGAAAAGATGCCG allB 619434 - 620795 + | allantoinase TERM 846 620810 - 620830 + F 76 -10.4 -3.36671 | ATCTGGCCCCTGCAA TGCCCGTC CTTGC GGCGGGCA TTCTCCGGTTAAGGT TERM 847 620872 - 620902 + G 100 -6.9 -5.63012 | gap 1, opp_overlap 620880 620881 CAATTTTGCAGTCAG CCGC-GAAAGCCTG TTAT CAGGATTTCAGTGG TTTTTCTTTATTTTT ybbY 620852 - 622153 + | putative uracil/xanthine transporter TERM 848 622496 - 622506 + G 72 -6.8 -4.25104 | AAGCGTAATCCGTTG CTGG CCT CCAG TTTTGGTACGGGGGA glxK 622175 - 623320 + | glycerate kinase II TERM 849 623336 - 623359 + T 79 -5.3 -5.10497 | opp_overlap 623335 CTCTTGCCATTAGAG CGGATGC ATTTTATCCC GCATCCG TTTTTTACCTGAATT TERM 850 623407 - 623388 - T 100 -13.6 -5.44119 | TTTACCGCAAAAAAA GCCACGGT ATAA ACCGTGGC AAAATCCAACATAGC ylbA 624235 - 623450 - | hypothetical protein TERM 851 623924 - 623950 + g 88 -12.4 -3.59087 | opp_overlap 623916 623915 AAGATAGCCACCTTC GCTTAAGGCAAA TGT TTTGCCTTCAGC TTTGGCAGTGATATT allC 625481 - 624246 - | allantoate amidohydrolase TERM 852 625411 - 625396 - G 70 -6.1 -4.21141 | opp_overlap 625396 GGCGAATAAAGTAAA CGGGT CATCCC ACCCG TTGGGTCAGCGCCAA allD 626552 - 625503 - | ureidoglycolate dehydrogenase TERM 853 626633 - 626610 - H 70 -6.1 -4.27861 | overlap 626612 AACATACAGGGAAAA TATCTGGAT TATGTG ATCCAGACA GGCAAAAAAATATAG TERM 854 628310 - 628341 + G 80 -11.5 -3.40371 | TCGCGGTCGTGAGTT CGCTGCCGGAAGC CACCTT GCTGGCGGCAGCG TTAATTCATCCGCTC fdrA 626869 - 628536 + | putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain ylbE 628546 - 629805 + | hypothetical protein TERM 855 630384 - 630394 + G 74 -2.4 -5.1615 | CTTTAGATACGCGCT CCGG TCG CCAG TTTTTTGCCTGTTCC ylbF 629816 - 630631 + | hypothetical protein ybcF 630628 - 631521 + | putative carbamate kinase purK 632715 - 631648 - | N5-carboxyaminoimidazole ribonucleotide synthase purE 633221 - 632712 - | N5-carboxyaminoimidazole ribonucleotide mutase lpxH 634061 - 633339 - | UDP-2,3-diacylglucosamine pyrophosphatase TERM 856 633834 - 633820 - G 74 -6.4 -4.46212 | TTGCCGAGCAGAAAA TCACGG TTG CCATGA ATGAAATAACAGGGA TERM 857 634026 - 633991 - G 100 -16.3 -5.00616 | gap 1, opp_overlap 634000 TCCCCCGCTAAAAAA CGCAGAA-AACCGGCG GTGAT CGCCGGTTCTTCCGCG CAGAGATGAAGATCT TERM 858 634000 - 634016 + g 85 -11.5 -3.61398 | opp_overlap 633991 AAAAAACGCAGAAAA CCGGCGG TGA TCGCCGG TTCTTCCGCGCAGAG ppiB 634558 - 634064 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 859 634315 - 634325 + g 72 -5.4 -4.58283 | GGGCCATTGCCAGCG TACC ACG GGTA TTTTTCAGACCGTTG cysS 634732 - 636117 + | cysteinyl-tRNA synthetase TERM 860 636129 - 636152 + T 100 -16.8 -3.46602 | GTAATTGCGCTATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA ybcI 636674 - 636153 - | conserved hypothetical protein; putative inner membrane protein TERM 861 636531 - 636515 - G 78 -5.1 -4.77036 | opp_overlap 636517 CGCGATGACCAAAAA CATTGCC GTA AGCAACG CCAAATTTAAACGAC TERM 862 636773 - 636752 - R 100 -15.9 -3.95836 | AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GGAAGGGATCAGGCA ybcJ 636994 - 636782 - | putative RNA-binding protein folD 637862 - 636996 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 863 637027 - 637041 + g 72 -7.1 -4.18494 | opp_overlap 637025 637029 TCATGATATTCAACG CACGC CTGTA GCGTG TTTTCAATCAGCGTG TERM 864 637261 - 637278 + g 70 -4.1 -4.72272 | AATAGATCGGCATTT TCTACGT GGTG ACGCAGA TTTTTAGTGAAACGG TERM 865 638003 - 638013 + H 71 -4 -4.75372 | CACTGTCGCTGAGAT TGAA AGC TTCA TTTTTCGTCCATGAT TERM 866 638501 - 638513 + G 70 -6.3 -4.23723 | GTCACACTCGGTCAA TATCG TAC CGATA TTTTCAATGCTGTTG sfmA 638333 - 638875 + | putative fimbrial-like adhesin protein sfmC 639095 - 639787 + | pilin chaperone, periplasmic TERM 867 641955 - 641945 - g 72 -8.2 -3.73072 | overlap 641946 AATGTTTTGATTAAA GCGC CTG GCGC AGGCGGTGTACGCAT TERM 868 641960 - 641946 - g 73 -11.4 -2.83522 | overlap 641945 ATGTTTTGATTAAAG CGCCTG GCG CAGGCG GTGTACGCATTGAAA sfmD 639818 - 642427 + | putative outer membrane export usher protein sfmH 642470 - 643447 + | putative fimbrial-like adhesin protein sfmF 643458 - 643973 + | putative fimbrial-like adhesin protein fimZ 644608 - 643976 - | DNA-binding transcriptional regulator, isolated component of a two-component regulator system TERM 869 644630 - 644661 + r 75 -8.8 -3.76224 | opp_overlap 644636, overlap 644633 CAGTCTCATAGGATC GGACAATTTTCCGT TAGG GCGGGAAATTGTAC TTTGATACATGAAAA TERM 870 644853 - 644823 - R 79 -11.8 -2.60079 | overlap 644833 TGACCGTATAATTCA CGCGATTACACCGC ATT GCGGTATCAACGCG CCCTTAGCTCAGTTG intD 646106 - 644943 - | putative integrase; DLP12 prophage TERM 871 645354 - 645375 + gr 72 -7.2 -4.13341 | ACAGGCGGTATCGTT CAGCGCCA CACCAA TGGCGCGG TTTGATTTGCTCTCT ECUMN_0577 646363 - 645962 - | Excisionase from phage origin ECUMN_0578 646583 - 646305 - | conserved hypothetical protein from phage origin ECUMN_0579 646849 - 646631 - | conserved hypothetical protein from bacteriophage origin; putative Zn-finger, prokaryotic DksA/TraR C4 type; putative DnaK suppressor protein TERM 872 646925 - 646911 - R 100 -7.8 -5.64873 | GCGAACAATAAAAAA GGAGCC TGT AGCTCC CTGATGATTTTGCTT ECUMN_0580 647259 - 646942 - | hypothetical protein TERM 873 647061 - 647071 + g 71 -3.2 -4.82901 | GTACGCTACGGCAAA TGTC ATC GACG TTTTTATCCGGAAAC ECUMN_0581 647431 - 647240 - | conserved hypothetical protein from phage origin TERM 874 647520 - 647502 - R 84 -9.5 -4.27117 | opp_overlap 647498 647502 TTCTGATAACAGAAA GGCCGGG AAATA CCCAGCC TCGCTTTGTAATGGA ECUMN_0582 648263 - 647583 - | exonuclease from phage origin ECUMN_0583 649045 - 648260 - | Recombination protein bet from phage origin ECUMN_0584 649347 - 649051 - | putative host-nuclease inhibitor protein Gam of bacteriophage ECUMN_0585 649629 - 649423 - | Prophage Kil protein TERM 875 649742 - 649716 - R 74 -9.4 -3.28712 | opp_overlap 649708, overlap 649720 CGCCGGTTGTCATAA CTAAGCCGCCTC GTT GAAGCGACTAAG GTATGAAATGTTGAG TERM 876 649738 - 649720 - R 71 -8.8 -3.44146 | opp_overlap 649708, overlap 649716 GGTTGTCATAACTAA GCCGCCTC GTT GAAGCGAC TAAGGTATGAAATGT TERM 877 649936 - 649947 + r 73 -4.4 -4.85618 | opp_overlap 649920 TTGTTTTATCGTCAA CAAC AAAA GTTG TTTTATTGGTTGTTT TERM 878 650103 - 650086 - R 93 -9.8 -5.09259 | opp_overlap 650100 GAGGGCAAAAGAAAA CCCGGC ACGGTG GCCGGG TAGCATCACTATTCG ECUMN_0586 651044 - 650112 - | conserved hypothetical protein from bacteriophage origin ECUMN_0587 651514 - 651041 - | conserved hypothetical protein from bacteriophage origin ECUMN_0588 652351 - 651596 - | Regulatory protein CI from bacteriophage origin TERM 879 652350 - 652328 - G 77 -6.4 -4.58773 | opp_overlap 652328 652326 TCCATCAAACGAAAA TGGTTGTT GACTAAA AACAACCA TAGTTTTAATCTTGA cro 652390 - 652620 + | Cro ECUMN_0590 652690 - 653229 + | Regulatory protein CII (modular protein) from bacteriophage origin; putative coiled-coil TERM 880 653717 - 653690 - g 79 -3.7 -5.11063 | gap 1, opp_overlap 653695, overlap 653695 653708 653714 653715 ATCAGGTAAGAAAAA TAAAGTTTACCT GAAAG AGGTAAA-TTTA CCTGAATCAGGTAAG TERM 881 653756 - 653714 - g 76 -9.4 -3.81137 | overlap 653690 653708 653715 653737 CCTGAAAGAGGTAAA TTTACCTGAATCAGGTAA GAAAAGT TTACCCAAATCAGGTAAA GGCGTTTACCCGAAT TERM 882 653780 - 653737 - g 100 -13.4 -4.69656 | overlap 653714 653757 653758 AATCAGGTAAGAAAA GTTTACCCAAATCAGGTAAA GGCG TTTACCCGAATCAGGTAAAC ACAAAAGACAAACTA TERM 883 653782 - 653758 - g 75 -11.5 -2.84053 | overlap 653737 653757 CCAAATCAGGTAAAG GCGTTTACCCG AAT CAGGTAAACAC AAAAGACAAACTAAC ECUMN_0591 653226 - 654245 + | Replication protein O frm phage origin ECUMN_0592 654242 - 654943 + | putative replication protein P of bacteriophage ECUMN_0593 654940 - 655242 + | Ren protein from phage origin ECUMN_0594 655173 - 655382 + | hypothetical protein, putative ankyrine domain, from bacteriophage origin TERM 884 655406 - 655417 + T 71 -2.2 -5.06414 | AGTCCGTTAGTTCGT TGGT AATC ACCG TTTTTGTTAGAGAAG TERM 885 655432 - 655469 + T 70 -6.3 -4.2704 | opp_overlap 655436, overlap 655419 GTTTTTGTTAGAGAA GTAAGCATCGCTGACAA AATA TTCTCAACGATGCCTGC TTTATTGCTACTACA TERM 886 655465 - 655436 - T 77 -10.1 -3.49618 | opp_overlap 655419 655432 TTGTTAGAGAAGTAA GCATCGCTGACAA AATA TTCTCAACGATGC CTGCTTTATTGCTAC ECUMN_0595 656993 - 655491 - | Chromosome segregation ATPase from phage origin, putative coiled-coil TERM 887 656517 - 656531 + g 90 -5 -5.43329 | overlap 656519 CAGCATTAATTTCTG TTCATC CCT GATGGA TTTTATTTTGTTTTT TERM 888 657175 - 657191 + H 89 -9.5 -4.44667 | AAATGAACTCTTTAT CCTTTCA AGG TGAAAGG TTTCTTCTTCGGAAA ECUMN_0596 657369 - 657542 + | hypothetical protein, putative membrane protein TERM 889 657630 - 657642 + F 100 -6.2 -5.626 | opp_overlap 657624 657619 657628 ACTACTCAACGCATA CCGC GTTAA GCGG TTTTTTTGTGCGCTA TERM 890 657749 - 657781 + F 71 -10 -2.74012 | gap 1, overlap 657760 CCAACCTTACACAGT TCACCACCAGTCGAT TGGC GTCG-TTGGTGGTGA TGGTTAACCTGATGA TERM 891 657995 - 657975 - g 100 -15.5 -3.46563 | CAGATATGATGACAA GGGTGGTCA AAG TGACCACCC CTCGTGGAATGCAGG ECUMN_0597 657806 - 658414 + | conserved hypothetical protein from bacteriophage origin TERM 892 658434 - 658466 + F 100 -9.3 -5.88471 | gap 1, opp_overlap 658433 658434 ACTAGTTAGAAATAC TGCCAGCA-TTCTG CGATGA CGGAAGTGCTGGCA TTTTTTTTGGTAATG ECUMN_0598 658650 - 659159 + | conserved hypothetical protein; putative exported protein TERM 893 659289 - 659314 + F 83 -6.1 -5.08824 | opp_overlap 659296 AACTCTCTTCTCCCT TCACAGATGCA GAGA TGCACCTGCGA TTTTTTGCATCCAGC ybcN 659354 - 659809 + | conserved hypothetical protein; DLP12 prophage ninE 659809 - 659979 + | conserved hypothetical protein; DLP12 prophage ybcO 659972 - 660262 + | conserved hypothetical protein; DLP12 prophage rusA 660259 - 660621 + | endonuclease RUS; DLP12 prophage ybcQ 660844 - 661227 + | putative antitermination protein Q homolog; DLP12 prophage TERM 894 661279 - 661260 - T 90 -9.2 -4.88129 | overlap 661261 AAAAATTATTAAAAA TGGGGCGT TGAG ACGCCCCC AAAAATAAAGGGTAA TERM 895 661278 - 661261 - T 93 -12.7 -3.50437 | overlap 661260 AAAATTATTAAAAAT GGGGCGT TGAG ACGCCCC CAAAAATAAAGGGTA TERM 896 661366 - 661401 + T 100 -14.2 -4.77036 | gap 1, overlap 661368 CTTGAGGGAGCCACT TATATGTTG-GGGAGGC AAC GCCTCCCGCAACATATC TTTTTCGTAATCAGA TERM 897 661368 - 661399 + T 100 -16.8 -4.00443 | gap 1, overlap 661366 TGAGGGAGCCACTTA TATGTTG-GGGAGGC AAC GCCTCCCGCAACATA TCTTTTTCGTAATCA nmpC 662499 - 661417 - | putative outer membrane porin TERM 898 662931 - 662946 + H 84 -7.5 -4.95854 | opp_overlap 662931 GTCACACAGCTTAAA CCCGC CGTCGA GCGGG TTTTTCCATTTTTTG TERM 899 663131 - 663141 + G 72 -4.6 -4.60487 | overlap 663128 663126 CCTCAGCAGGTAGTG CCGG GTA CTGG TTTTTACAGCTGCTC essD 663073 - 663288 + | putative phage lysis protein S; DLP12 prophage TERM 900 663573 - 663548 - g 81 -10.5 -3.65294 | overlap 663544 CGCCAGACAAATTAA CCGGTACATCA AAGT CGATATACCGG AAACAACGCGCGGCG ybcS 663288 - 663785 + | putative lysozyme; DLP12 prophage Rz 663770 - 664249 + | Endopeptidase from phage origin (Lysis protein Rz) TERM 901 664424 - 664441 + T 93 -10.5 -5.10208 | AAATACCAGGATTTA GCCTCGC ATTC GCGGGGC TTTTTATTGCCATTA TERM 902 664450 - 664493 + T 85 -11.9 -3.32844 | opp_overlap 664462, overlap 664462 GCGGGGCTTTTTATT GCCATTACAAAAGCCACTT CCTACA GAGTGGCTTTGATAATGGC TTATACCCTACACGG TERM 903 664481 - 664462 - T 71 -5 -4.4648 | gap 1, opp_overlap 664450 664462 ATTGCCATTACAAAA GCCACTTCC TAC AGA-GTGGC TTTGATAATGGCTTA ECUMN_0608 664695 - 664531 - | Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) (fragment) ECUMN_0609 665166 - 664741 - | conserved hypothetical protein from phage origin TERM 904 664804 - 664817 + g 83 -5.3 -5.13722 | opp_overlap 664804 TAATGAATTATCAAA GGTAT AGTA ATACC TTTTGTTTTCGTGGA ynfO 665442 - 665209 - | conserved hypothetical protein; Qin prophage ECUMN_0611 665548 - 665691 + | hypothetical protein TERM 905 665749 - 665807 + F 100 -16.3 -3.91506 | opp_overlap 665751 665755, overlap 665751 665755 AAAATACCCCCTGAA AAGAAAGGAAACGACAGGTGCTGAAAA CGAAC TTTTGGGCCTCTGTCGTTTCCTTTCTC TGTTTTTGGCCGTGG TERM 906 665805 - 665751 - f 100 -14.5 -4.09511 | opp_overlap 665749 665751 665755, overlap 665755 AATACCCCCTGAAAA GAAAGGAAACGACAGGTGCTGAAAA CGAAC TTTTGGGCCTCTGTCGTTTCCTTTC TCTGTTTTTGGCCGT TERM 907 665751 - 665805 + F 100 -18.9 -3.54256 | opp_overlap 665751 665755, overlap 665749 665755 AATACCCCCTGAAAA GAAAGGAAACGACAGGTGCTGAAAA CGAAC TTTTGGGCCTCTGTCGTTTCCTTTC TCTGTTTTTGGCCGT TERM 908 665755 - 665801 + F 100 -13.9 -4.38876 | opp_overlap 665751 665755, overlap 665751 665749 CCCCCTGAAAAGAAA GGAAACGACAGGTGCTGAAAA CGAAC TTTTGGGCCTCTGTCGTTTCC TTTCTCTGTTTTTGG TERM 909 665801 - 665755 - f 91 -9.5 -4.64861 | opp_overlap 665755 665751 665749, overlap 665751 CCCCCTGAAAAGAAA GGAAACGACAGGTGCTGAAAA CGAAC TTTTGGGCCTCTGTCGTTTCC TTTCTCTGTTTTTGG nohB 665831 - 666376 + | DNA packaging protein; DLP12 prophage TERM 910 666781 - 666796 + G 70 -4 -4.63527 | gap 1, opp_overlap 666781 AGCACCGGGATAACA CGC-TCA CTA TGAAGCG TTTTTCCAATGGTCG TERM 911 667042 - 667054 + G 78 -7.7 -4.43681 | CAGCCAGTGAATCCC CGCAT TTT ATGCG TTTTCATGTTGCCTG TERM 912 667136 - 667160 + G 70 -4.1 -4.60797 | opp_overlap 667117 667135 667138, overlap 667138 GTTTGGCCTCAAATG GACGCCGGATG ATC CCTCCAGCGTG TTTTATCTCTGCGAG TERM 913 667913 - 667877 - g 95 -5.8 -5.33026 | gap 1, overlap 667898 TAAGCGAAACAAAAA CGGGGTTTACCTTACCG AAAT CGGTACGG-ATACCGCG AAAGAGCAGATTTAT TERM 914 668091 - 668077 - g 100 -5 -5.52986 | overlap 668079 ATGGCAGGAAAAAAA TACTGT GGG ACAGCA AAAAGCGACGCAATG TERM 915 668089 - 668079 - g 70 -5.4 -4.40552 | overlap 668077 GGCAGGAAAAAAATA CTGT GGG ACAG CAAAAAGCGACGCAA TERM 916 668112 - 668096 - g 73 -3.5 -4.8048 | opp_overlap 668097, overlap 668097 GTGGGACAGCAAAAA GCGACGC AAT GAGGCGC TCGACTGCTTCGTTT TERM 917 668253 - 668233 - g 79 -4.6 -4.95167 | CAACCAACAAGAAAA CACTGGCA GATTA CGCCCGTG CCTTATCCGGAGAGG ECUMN_0613 666351 - 668276 + | terminase large subunit (DNA packaging protein A) from bacteriophage origin W 668273 - 668479 + | Head-to-tail joining protein W (gpW) from bacteriophage origin TERM 918 669050 - 669023 - gf 74 -9.8 -3.42069 | gap 1, overlap 669012 669021 GCAACCCGAACAATA CCGGCGACAGCCG GAA CTGCCGT-GCCGG TGTGCAGATTAATGA TERM 919 669275 - 669223 - gf 74 -10.8 -2.71791 | gap 1, overlap 669222 669252 669255 ACTCGCGGTGCAAAT GTGTTTTACAGCGTGATGGAGCA GATGAAGA TGCTCGA-CACGCTGCAGAACAC GCAGCTGCAGAGCGC TERM 920 670009 - 669994 - g 82 -11.8 -3.53444 | opp_overlap 670006 GCAGCCGGTCTTAAA CCGCCC GCCT GGGCGG CTGCGGCATTTGAAT B 668476 - 670077 + | Portal protein B (Minor capsid protein B) from bacteriophage origin TERM 921 670127 - 670142 + GF 100 -7.5 -5.18371 | CCGCTGATGCTTGAA CCCGC CTATGC GCGGG TTTTCTTTTGTGCGC C 669944 - 671389 + | Minor capsid protein C from bacteriophage origin D 671399 - 671731 + | head decoration protein (Major capsid protein D) from bacteriophage origin TERM 922 671767 - 671752 - f 70 -6 -4.24342 | opp_overlap 671753, overlap 671753 CCCTTCATCAACAAA GGCCGC CTGT GCGGCT TTTTTTATGGAAATA TERM 923 671766 - 671753 - f 72 -9.5 -3.14284 | opp_overlap 671753, overlap 671752 CCTTCATCAACAAAG GCCGC CTGT GCGGC TTTTTTTATGGAAAT TERM 924 671753 - 671766 + F 100 -9.5 -5.61596 | opp_overlap 671753 671752 CCTTCATCAACAAAG GCCGC CTGT GCGGC TTTTTTTATGGAAAT ECUMN_0618 671787 - 672812 + | major head protein (Major coat protein) from bacteriophage origin TERM 925 672816 - 672831 + F 91 -10.4 -4.64844 | CAACTGGCGTAATCG TGGCCC TTCG GGGCCA TTTTCTCTATGTGGA fI 672854 - 673249 + | DNA packaging protein FI from bacteriophage origin fII 673261 - 673614 + | Tail attachment protein (Minor capsid protein FII) from bacteriophage origin TERM 926 673701 - 673681 - g 78 -8.1 -4.30576 | overlap 673662 673683 GCCGTATCAGCAAAA CGGCGGTGC CTG GTGCCGCCG CAATGGCCATTAACC ECUMN_0621 673626 - 674204 + | Minor tail protein Z (GpZ) TERM 927 674254 - 674288 + G 100 -10.7 -4.72272 | gap 1, opp_overlap 674256, overlap 674257 ACTGGAGAAGCATGA CACCGGGGCGACGCTT TTTG ATG-GTCGCCCCGCTG TTTTTGATGAGGCGG TERM 928 674257 - 674285 + G 72 -11 -2.98472 | gap 1, opp_overlap 674256, overlap 674254 GGAGAAGCATGACAC CGGGGCGACGCTT TTTG ATG-GTCGCCCCG CTGTTTTTGATGAGG TERM 929 674310 - 674321 + G 70 -7.2 -4.08706 | ATGAGGCGGATTTTC CGGC AATT GCCG TTTATCTCATCGGCG ECUMN_0622 674201 - 674596 + | Minor tail protein U TERM 930 675253 - 675216 - g 79 -2.6 -5.18371 | opp_overlap 675245, overlap 675217 675218 TCGGATAAAACAAAA GCCACCGTGTCGGTCA GTGGTA TGACCATCACCGTGAA CGGCGTTGCTGCAGG ECUMN_0623 674574 - 675344 + | Major tail protein V TERM 931 675542 - 675512 - g 87 -14 -3.03124 | GTTTACTGTGGAAGA CGCCATCAGAACCG GCG CGTTTCTGGTGGCG ATGTCCCTGTGGCAT ECUMN_0624 675360 - 675782 + | Minor tail protein G TERM 932 675798 - 675833 + G 81 -13.2 -2.71483 | opp_overlap 675798 675797, overlap 675788 GTTTTGCCCTGAAAC TGGCGCGTGAGATGGG GCGA CCCGACTGGCGCGCCA TGCTTGCCGGGATGT TERM 933 675928 - 675955 + G 90 -9.2 -4.58395 | gap 1 GGATATGCACTTTTC CGGGCTGACGTAC ACC GTGC-TCAGCCTG TTTTTCAGCGATCCG ECUMN_0625 675764 - 676198 + | Minor tail protein T ECUMN_0626 676191 - 678746 + | Minor tail protein precursor H TERM 934 678764 - 678750 - g 72 -6.4 -4.30576 | GGTGGACGATGAAAA CCTTCC GCT GGAAAG TGAAACCGGGTATGG ECUMN_0627 678743 - 679072 + | Minor tail protein M TERM 935 679383 - 679403 + G 90 -9.7 -4.42653 | overlap 679385 CGGCGGAACGGTGGT CAGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT ECUMN_0628 679072 - 679770 + | Minor tail protein L TERM 936 679802 - 679786 - gf 71 -9.5 -3.02649 | overlap 679788 ATCCCATGACACAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA TERM 937 680278 - 680306 + GF 76 -11 -2.98508 | overlap 680280 680281 ATCAGGTGCCGTTGT CAGCGGCACAGC CGGGC GATGTGCTGCTG TGCTGTTTTGGTTCA TERM 938 680281 - 680311 + GF 90 -9.6 -4.45945 | overlap 680280 680278 AGGTGCCGTTGTCAG CGGCACAGCCGGGC GAT GTGCTGCTGTGCTG TTTTGGTTCATCAGT TERM 939 680355 - 680336 - gf 77 -11.4 -2.7185 | ATCAGTGCCGAATCA CGCCGCAA TTTA CTGCGGCG ACGGCGAGCTGCTGC ECUMN_0629 679776 - 680519 + | putative tail fiber component K of prophage ECUMN_0630 680417 - 681088 + | Tail assembly protein I TERM 940 681104 - 681127 + F 71 -9.6 -3.01125 | opp_overlap 681109, overlap 681109 TGAAAAACGTTTATG TGAAACCGCC TCCG GGCGGTTTTG TCGTTTATGGAGCGT TERM 941 681122 - 681109 - f 77 -9.5 -3.60475 | opp_overlap 681104 681109 AACGTTTATGTGAAA CCGCC TCCG GGCGG TTTTGTCGTTTATGG TERM 942 681109 - 681122 + F 91 -9.5 -4.64846 | opp_overlap 681109, overlap 681104 AACGTTTATGTGAAA CCGCC TCCG GGCGG TTTTGTCGTTTATGG TERM 943 681298 - 681278 - g 90 -7.5 -4.7497 | TGGATGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CAGTGCTGGACAGTG TERM 944 682909 - 682884 - g 72 -9.7 -3.30441 | GAGTATCCGTGAGAA CGACGACGGCA CGTA TGCCATCACCG CCGTGCAGCATGTAC TERM 945 683344 - 683356 + G 78 -9.1 -3.96148 | opp_overlap 683336 CAGATAACCGCCACG CCGCA TCT TGCGG TTTATGATCCGACGG TERM 946 683754 - 683743 - g 74 -5.8 -4.45068 | ACCGTCAATAAGAAA CTGG AAGA CCAG AGTGCAGCGATCCAG TERM 947 683811 - 683782 - g 70 -6.5 -4.18367 | CAGCAGATACAGAAA GTTCAGGTTGATA CAAA TAATAACCTGAAC AGCATGTGGGCTGTG ECUMN_0631 681148 - 684645 + | Host specificity protein J of prophage TERM 948 684667 - 684684 + F 100 -12.7 -5.72622 | opp_overlap 684658 684665 TATAACCCCAATACG GGCGCCA GAAA TGGCGCC TTTTTTATTTGTGGA ECUMN_0632 684706 - 687075 + | conserved hypothetical protein, putative side tail fiber protein homolog from prophage TERM 949 687104 - 687119 + G 81 -10.4 -3.86194 | opp_overlap 687103 CAAATTTGCAGACAG GGCCGA CTTT TCGGCC TTTATGGAGAGCATT ECUMN_0633 687072 - 687353 + | hypothetical protein ECUMN_0634 687363 - 688067 + | hypothetical protein ECUMN_0635 688078 - 688371 + | hypothetical protein appY 689047 - 689796 + | DNA-binding transcriptional activator; DLP12 prophage TERM 950 690000 - 690030 + T 95 -11.8 -4.43309 | overlap 690001 TTGAAATGGCTAGTT ATTCCCCGGGGCGA TTT TCACCTCGGGGAAA TTTTAGTTGGCGTTC TERM 951 690001 - 690029 + T 100 -15.3 -3.25262 | overlap 690000 TGAAATGGCTAGTTA TTCCCCGGGGCGA TTT TCACCTCGGGGAA ATTTTAGTTGGCGTT ompT 690999 - 690046 - | outer membrane protease VII (outer membrane protein 3b); DLP12 prophage ECUMN_0638 691519 - 691403 - | hypothetical protein envY 692274 - 691513 - | DNA-binding transcriptional activator of porin biosynthesis TERM 952 692448 - 692418 - R 91 -11.2 -3.727 | opp_overlap 692430, overlap 692420 CTGACGAGAGCGAAA GAGGTAAGCCAGGT CGT ACCCGACTTACCTG GAGGAGATTTAATAC TERM 953 692446 - 692420 - R 100 -13.8 -3.44487 | opp_overlap 692430, overlap 692418 GACGAGAGCGAAAGA GGTAAGCCAGGT CGT ACCCGACTTACC TGGAGGAGATTTAAT ybcH 693347 - 692457 - | hypothetical protein TERM 954 693066 - 693054 - G 82 -3.3 -5.24129 | CTGGTGCATAAAAAA TTCCG GAT CGGCA TTCAGCCCGACAATC nfrA 696320 - 693348 - | bacteriophage N4 receptor, outer membrane subunit TERM 955 695406 - 695430 + g 73 -11.4 -2.56124 | opp_overlap 695405 695404, overlap 695405 695401 695409 695424 CTGTACCGTATAATT CGCCAACGCC AGAAC GGGGTTGGCG CTGTATTTAGATAAC TERM 956 696205 - 696190 - G 79 -4 -5.05116 | gap 1, opp_overlap 696203, overlap 696192 GGATAAATAACAAAA TG-GCGA TAA TCGCTCA GCCCCAGCTCTTCTG nfrB 698544 - 696307 - | bacteriophage N4 receptor, inner membrane subunit TERM 957 697252 - 697224 - G 78 -7.4 -4.36914 | gap 1 GGTTGCCCCAGAAAA GACGCAGG-ACAG ATAG CAGCCCCTGCGTC AGGCCGTAGTAGCCA TERM 958 697432 - 697416 - G 72 -5.1 -4.44797 | overlap 697408 CCAGCAACAGCAAAA GCTGG ATCATCA CCAGC ATCGCGAGGAAGCTG TERM 959 699173 - 699192 + G 81 -5 -5.14965 | AATATTGTCGATAGC GTTGCAAT TATA ATTGCCAC TTTTTTACTAGAGGT TERM 960 699236 - 699226 - g 86 -4 -5.38249 | AGTAACGACAAAAAA TATC AAT GATA TAAATAAGAAAGAAA ECUMN_0643 699092 - 699262 + | hypothetical protein ECUMN_0644 699910 - 699482 - | hypothetical protein ECUMN_0645 700384 - 699938 - | hypothetical protein ECUMN_0646 700957 - 700715 - | hypothetical protein ECUMN_0647 701227 - 700991 - | hypothetical protein yhhI 702341 - 701205 - | putative transposase ECUMN_0649 702689 - 702420 - | hypothetical protein, putative Rhs family protein ECUMN_0650 703168 - 702707 - | hypothetical protein ECUMN_0651 703371 - 703171 - | hypothetical protein TERM 961 704735 - 704759 + r 82 -10.1 -3.91897 | opp_overlap 704737, overlap 704737 704755 AGCTTATGCTTATTA CATGCAAAACG TCC CGTTTTGCATC TTTGTGCCTACGGCA TERM 962 704757 - 704737 - R 82 -12.7 -2.79183 | opp_overlap 704735 704737 704755 CTTATGCTTATTACA TGCAAAACG TCC CGTTTTGCA TCTTTGTGCCTACGG TERM 963 704737 - 704757 + r 93 -12.7 -3.5511 | opp_overlap 704737, overlap 704735 704755 CTTATGCTTATTACA TGCAAAACG TCC CGTTTTGCA TCTTTGTGCCTACGG ECUMN_0654 705043 - 704732 - | hypothetical protein ECUMN_0655 706146 - 705136 - | hypothetical protein ECUMN_0656 706492 - 706178 - | hypothetical protein ECUMN_0657 707586 - 706546 - | hypothetical protein, Putative lipoprotein ECUMN_0658 708738 - 707698 - | hypothetical protein, Putative lipoprotein ECUMN_0659 709063 - 708764 - | hypothetical protein cusS 710892 - 709432 - | sensory histidine kinase in two-component regulatory system with CusR, senses copper ions TERM 964 710815 - 710800 - G 77 -6 -4.70879 | overlap 710791 TGCAAAGGCGAAAAA CGCCGC GATG GTGGCG AGGCTGATAAAAAAG cusR 711553 - 710870 - | DNA-binding response regulator in two-component regulatory system with CusS TERM 965 711084 - 711074 - G 71 -3.2 -4.86621 | ATGGCGAAGGAAAAA CTCC AGC AGAG TAAACTCTTTACTGG TERM 966 711615 - 711636 + H 74 -6.7 -4.34402 | opp_overlap 711623, overlap 711614 ATGGCAATCGCTTAT TGGCAAAAT GACA ATTTTGTCA TTTTCCTGTCACCGG TERM 967 712603 - 712618 + G 91 -9 -4.65838 | TAATGCCAATATTGG TGCTGC ACGT GCAGCA TTTTTCCCGTCTATC TERM 968 713076 - 713064 - g 71 -10.5 -2.8806 | AAATTTCTTTATATA CCGCC TTA GGCGG CGGTTGGCAGCAATA cusC 711704 - 713092 + | copper/silver efflux system, outer membrane component cusF 713116 - 713448 + | periplasmic copper-binding protein cusB 713464 - 714687 + | copper/silver efflux system, membrane fusion protein TERM 969 714724 - 714736 + G 70 -4.8 -4.49311 | overlap 714714 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTCTGGTGCTGAT TERM 970 715879 - 715918 + G 73 -11.5 -2.83715 | gap 1, opp_overlap 715870 ATATTATGTCGCTGG GCGGCATTG-CGATTGCC GTCGG GGCGATGGTCGATGCCGC TATCGTCATGATCGA cusA 714699 - 717842 + | copper/silver efflux system, membrane component pheP 717944 - 719320 + | phenylalanine transporter TERM 971 719352 - 719378 + T 100 -16.7 -5.65513 | opp_overlap 719350 719349 719347 CCGACAAAACGATGT CCGCTCTCATC CATTC GATGAGAGCGG TTTTTTTAATTACTG ybdG 720635 - 719388 - | putative membrane protein; putative channel TERM 972 720735 - 720714 - R 87 -11.5 -3.61103 | overlap 720716 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GAGAGAATTACACTT TERM 973 720733 - 720716 - R 100 -14.1 -3.38224 | overlap 720714 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGAGAGAATTACAC nfnB 721396 - 720743 - | dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive ybdF 721978 - 721475 - | hypothetical protein ybdJ 722171 - 721923 - | conserved hypothetical protein; putative inner membrane protein ybdK 723355 - 722237 - | gamma-glutamyl:cysteine ligase TERM 974 722927 - 722914 - G 82 -8.1 -4.49556 | CGTGCAGCAAATAAA TGGCG TCAT CGCCA CTGGCGCAACCAACA ECUMN_0672 723367 - 723543 + | hypothetical protein TERM 975 723746 - 723714 - f 85 -11.4 -3.45571 | gap 1, opp_overlap 723742, overlap 723708 GTCTGGAAAGATGAA GCCCCAGGA-CGATA TTTC TATCAACCCTGGGGC TGCCACTCCAAACCC hokE 723773 - 723961 + | toxic polypeptide, small TERM 976 723962 - 723993 + F 74 -10.8 -2.59564 | opp_overlap 723961, overlap 723962 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GTAA TCCCCGCATATCCG GTTGTCAGGTCAGGG TERM 977 723962 - 723994 + F 80 -10.6 -3.32963 | gap 1, opp_overlap 723961, overlap 723962 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGGGT TERM 978 724033 - 724062 + F 100 -17.9 -4.19735 | ACCTGCTTTACACTT TCGCCCGCGGTCA GCAA TGGCTGCGGGCGA TTTCGTTTTACGAAC TERM 979 724245 - 724285 + F 75 -9.2 -3.65046 | gap 1, opp_overlap 724218 ATTTCTATCAACCCT GGGGCTGCCACTCCAAA CCAGACAA TTTGGA-TGGTAGTCCC TTCTTCGCATGGAGG hokE 724311 - 724463 + | toxic polypeptide, small TERM 980 724464 - 724495 + T 74 -10.8 -2.59564 | opp_overlap 724463, overlap 724464 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GTAA TCCCCGCATATCCG GTTGTCAGGTCAGGG TERM 981 724464 - 724496 + T 80 -10.6 -3.32963 | gap 1, opp_overlap 724463, overlap 724464 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGGGT entD 725355 - 724585 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 982 725349 - 725320 - G 95 -14.3 -3.30124 | TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACGAC GCGCACTTTGTCAAC fepA 727620 - 725380 - | iron-enterobactin outer membrane transporter TERM 983 725743 - 725774 + g 77 -2.9 -5.11836 | gap 1, overlap 725746 TGAGTTCAACGTATA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 984 726408 - 726380 - G 74 -11 -3.14602 | gap 1, opp_overlap 726356 726397, overlap 726378 CTCACGCCATCAATA GCGC-CACCGGTA TTCG TCCCGGTGAGCGC CTGGGTGTTGGAACT TERM 985 726945 - 726962 + g 75 -6.9 -4.4017 | GGCCCTGGTTGATAT CCCACGC GTCA GCCTGGG TTTTGTCGAGGTTGC fes 727941 - 729065 + | enterobactin/ferric enterobactin esterase ybdZ 729068 - 729286 + | hypothetical protein TERM 986 730701 - 730685 - g 95 -10.1 -4.64144 | opp_overlap 730684, overlap 730676 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGTTGATGCGCGT TERM 987 731427 - 731437 + G 82 -3.2 -5.252 | CCAGAGTTGCGCGAC CTTG AAA CAGG TTTTTTGTAGCGGTG TERM 988 731549 - 731561 + G 70 -6.9 -4.07687 | CGGCGGTAGATGTCA GCTGG TAT CCGGC TTTTGGCGAGGAACT entF 729283 - 733164 + | enterobactin synthase multienzyme complex component, ATP-dependent TERM 989 733177 - 733215 + F 71 -9.2 -3.37482 | opp_overlap 733166 733183, overlap 733177 733179 733183 TAAATTTATATTATC TATAAACCCATAATTA CAGAAAA TAATTATGGGTTTATC ATTTGTTTAATTTAT TERM 990 733177 - 733216 + F 82 -7.6 -4.65182 | gap 1, opp_overlap 733166 733183, overlap 733177 733179 733183 TAAATTTATATTATC T-ATAAACCCATAATTA CAGAAAA TAATTATGGGTTTATCA TTTGTTTAATTTATA TERM 991 733179 - 733213 + F 83 -11.8 -3.23149 | opp_overlap 733166 733183, overlap 733177 733177 733183 AATTTATATTATCTA TAAACCCATAATTA CAGAAAA TAATTATGGGTTTA TCATTTGTTTAATTT TERM 992 733183 - 733209 + F 76 -8.2 -4.23391 | opp_overlap 733183, overlap 733179 733177 733177 TATATTATCTATAAA CCCATAATTA CAGAAAA TAATTATGGG TTTATCATTTGTTTA TERM 993 733209 - 733183 - f 79 -8.9 -3.94409 | opp_overlap 733183 733179 733177 733177 TATATTATCTATAAA CCCATAATTAC AGAAA ATAATTATGGG TTTATCATTTGTTTA fepE 733260 - 734498 + | regulator of length of O-antigen component of lipopolysaccharide chains fepC 735325 - 734510 - | iron-enterobactin transporter subunit ; ATP-binding component of ABC superfamily fepG 736314 - 735322 - | iron-enterobactin transporter subunit ; membrane component of ABC superfamily TERM 994 736106 - 736080 - G 70 -4.2 -4.67353 | overlap 736081 TCAGCGACTGAAAAA TCGCGCCGCTGA CGC CCAGTGCCGCGC CAATCAACAGCGCCA fepD 737315 - 736311 - | iron-enterobactin transporter subunit ; membrane component of ABC superfamily ybdA 737426 - 738676 + | enterobactin exporter fepB 739636 - 738680 - | iron-enterobactin transporter subunit ; periplasmic-binding component of ABC superfamily entC 739825 - 741000 + | isochorismate synthase 1 TERM 995 742220 - 742235 + G 74 -3.2 -4.90906 | overlap 742233 AGCACAATGCCAGCG CCTTTG ATGC CAACGG TTTTTACTGTTCTGG TERM 996 742605 - 742585 - g 70 -3.9 -4.72201 | overlap 742588 GTCGATAAAAAACAA TTACGTCAG TGG CTGGCGTCA CGCGCATCAGCCTGA entE 741010 - 742620 + | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex entB 742634 - 743491 + | isochorismatase TERM 997 743547 - 743562 + G 70 -6.1 -4.15044 | GAAAGGTATCGGCTA CGCCA CGGCGC TGGCG TTTGTTGAGGCGGGA entA 743491 - 744237 + | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase ybdB 744240 - 744653 + | putative esterase TERM 998 746306 - 746318 + G 72 -6.9 -4.19177 | overlap 746305 GGTGGATGCAGGTAC GCGTG CCG CGCGC TTTATGTTGCAGGAT cstA 744834 - 746939 + | carbon starvation protein ybdD 747093 - 747290 + | hypothetical protein ybdH 748388 - 747300 - | putative oxidoreductase TERM 999 749623 - 749651 + G 72 -8.2 -3.81137 | gap 1 GAAGGAATCGACGTT GCTGGCAGCAG CTGAACGC CTGC-GCCAGC TTTAGCTATTTAACC ybdL 748496 - 749656 + | methionine aminotransferase, PLP-dependent ibrB 750286 - 749657 - | immunoglobulin-binding regulator TERM 1000 749684 - 749718 + gT 70 -7.2 -3.90588 | opp_overlap 749684 CCAGGCGCGGGAATA TTGACGGTCGGCAA ACAACTC TTGCAGGCCGTTAA TTTGCTTCAGGCGTA ibrA 751479 - 750259 - | immunoglobulin-binding regulator ybdO 752564 - 751626 - | putative DNA-binding transcriptional regulator, LysR-type TERM 1001 752679 - 752733 + r 74 -3.1 -5.09762 | gap 1, overlap 752681 752684 752687 GAGCGAGCAATTCAT GCTTTTTTA-GGATGGTTGAAAAATA GGGA TATATTTCAACCATCCATGAATTATC TTTTATTTATTCCCC TERM 1002 752684 - 752728 + r 82 -10.4 -4.14927 | gap 1, overlap 752681 752679 752687 AGCAATTCATGCTTT TTTA-GGATGGTTGAAAAATA GGGA TATATTTCAACCATCCATGAA TTATCTTTTATTTAT TERM 1003 752687 - 752724 + r 77 -11.5 -2.71742 | overlap 752684 752681 752679 AATTCATGCTTTTTT AGGATGGTTGAAAAATA GGGA TATATTTCAACCATCCA TGAATTATCTTTTAT dsbG 753482 - 752736 - | periplasmic disulfide isomerase/thiol-disulphide oxidase TERM 1004 753194 - 753217 + g 76 -3.9 -4.89063 | gap 1, overlap 753194 753197 CCATCCGTTGCCACA TTT-CGCGCC CGGCT GGTGCGTAAA TTTCTTTTTCGATAA TERM 1005 753929 - 753907 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 753854 - 754417 + | alkyl hydroperoxide reductase, C22 subunit TERM 1006 754481 - 754500 + F 100 -13.6 -4.63218 | AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 1007 754632 - 754615 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 754588 - 756153 + | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding TERM 1008 756184 - 756207 + T 100 -13.1 -5.252 | opp_overlap 756199 ACCTGCAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATGGCAATA TERM 1009 756254 - 756227 - T 100 -14.8 -5.08601 | opp_overlap 756229, overlap 756199 TTATGGCAATAAAAA GCCCCGCCGGGA TGGC TCCGGGCAGGGC GGGATATTTATTCTG uspG 756702 - 756274 - | universal stress protein UP12 TERM 1010 757023 - 757004 - R 95 -12.2 -4.19258 | ATATTTGAGCGAAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 757468 - 757058 - | regulator of nucleoside diphosphate kinase TERM 1011 757526 - 757548 + r 87 -11.2 -3.6608 | opp_overlap 757526 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT TERM 1012 757548 - 757526 - R 100 -12.7 -5.11836 | opp_overlap 757526 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 1013 757597 - 757631 + r 72 -8.6 -3.6164 | overlap 757583 CTCTTTGAAGTGATT TGCGTCACATTCAGGG AAT TCCTCAATGTAGCGCA TTATGTATAAATCTT rna 758504 - 757698 - | ribonuclease I TERM 1014 758482 - 758468 - G 77 -8.5 -4.13872 | overlap 758459 758478 758479 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGCCAGAATG TERM 1015 758552 - 758593 + r 76 -7.9 -4.19371 | opp_overlap 758559, overlap 758555 CTATCTATTAAATCA TAAAAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 1016 758555 - 758590 + r 71 -9.6 -3.10512 | opp_overlap 758559, overlap 758552 TCTATTAAATCATAA AAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGA TGATTTATTCAGCGT TERM 1017 758586 - 758559 - R 100 -18.5 -5.42265 | opp_overlap 758555 758552 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA citT 760081 - 758618 - | citrate:succinate antiporter TERM 1018 759599 - 759583 - G 77 -6.5 -4.64598 | opp_overlap 759589, overlap 759554 759584 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 1019 759598 - 759584 - G 72 -10 -3.38036 | opp_overlap 759589, overlap 759554 759583 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG citG 761009 - 760131 - | triphosphoribosyl-dephospho-CoA transferase TERM 1020 760242 - 760259 + gr 78 -6.2 -4.63928 | ATAATCGAGATCGGC GGGGGT TCGAAT GCCCCC TTTTTGCAATAATGT citX 761535 - 760984 - | apo-citrate lyase phosphoribosyl-dephospho-CoA transferase citF 763071 - 761539 - | citrate lyase, citrate-ACP transferase (alpha) subunit citE 763990 - 763082 - | citrate lyase, citryl-ACP lyase (beta) subunit citD 764283 - 763987 - | citrate lyase, acyl carrier (gamma) subunit citC 765356 - 764298 - | citrate lyase synthetase TERM 1021 764606 - 764586 - G 72 -7.5 -3.93695 | TTCAGTACCGACAAA GCGGTGAGT TAC ACCCAGCGC GGGAGCGAGGTACTG TERM 1022 764858 - 764826 - G 75 -5 -4.8622 | gap 2, overlap 764828 764830 TTCTTTAACTAAAAA CAGA-TGCAAC-CAGT CGC ACTGTGCTGCAGCCTG TTGAATCAGATAACG TERM 1023 765042 - 765031 - G 77 -7.2 -4.58395 | opp_overlap 765038, overlap 765033 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT TERM 1024 765290 - 765304 + g 100 -2.7 -6.14618 | overlap 765291 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 1025 765291 - 765303 + g 70 -6.2 -4.25111 | overlap 765290 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 1026 766918 - 766930 + GH 71 -3.3 -4.7373 | TTTGCCGATCGCCAG GTGGC GGG GCTGC TTTTTGGTAAAGTGC citA 765736 - 767394 + | sensory histidine kinase in two-component regulatory system with citB citB 767363 - 768043 + | DNA-binding response regulator in two-component regulatory system with citA TERM 1027 768075 - 768053 - T 100 -13.4 -4.0162 | opp_overlap 768049 768048 768046, overlap 768064 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATGACTATTTACTTG dcuC 769469 - 768084 - | anaerobic C4-dicarboxylate transport TERM 1028 769528 - 769511 - H 89 -2.7 -5.72254 | GTAAATAATAAAAAA TTCCTAA AACT TAAGGAA AAAATATGCCCAATA TERM 1029 770283 - 770260 - g 100 -4.5 -5.73978 | overlap 770261 770276 ACGACAAAGAAAAAA CCGATCGCT ATAACG AGCGACCGT GGGGTGGCGGTTTTG TERM 1030 770282 - 770261 - g 74 -8 -4.01946 | overlap 770260 770276 CGACAAAGAAAAAAC CGATCGCT ATAACG AGCGACCG TGGGGTGGCGGTTTT crcA 770058 - 770618 + | palmitoyl transferase for Lipid A TERM 1031 770751 - 770767 + F 72 -7.3 -4.02302 | opp_overlap 770753 GGTGTACTGGTAACC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 770793 - 771002 + | DNA-binding transcriptional repressor TERM 1032 771026 - 771042 + T 100 -9.4 -5.9663 | opp_overlap 771026 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTCTTT TERM 1033 771042 - 771026 - T 86 -9.4 -4.36729 | opp_overlap 771026 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTCTTT crcB 771439 - 771056 - | conserved hypothetical protein; putative inner membrane protein associated with chromosome condensation TERM 1034 772173 - 772155 - g 77 -3 -5.06414 | opp_overlap 772157 772169, overlap 772157 GTGCGGGAACAAAAA TATCGGGC AAA GCCGGATT ATAGATCCCTTTGGC ybeM 771757 - 772320 + | putative amidase tatE 772449 - 772652 + | TatABCE protein translocation system subunit TERM 1035 772716 - 772699 - T 100 -11.3 -5.36441 | opp_overlap 772699 GTTCGATACAAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG TERM 1036 772699 - 772716 + T 100 -11.3 -5.24129 | opp_overlap 772699 GTTCGATACAAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG lipA 773718 - 772753 - | lipoate synthase TERM 1037 773608 - 773641 + g 74 -6 -4.57073 | gap 1, overlap 773610 TTTCATCCATTCCGG CTTGCGCAGCAGGGC TTCGC GCTCTGTTGC-CACG TTTTTAACCGGGATA ybeF 774880 - 773927 - | putative DNA-binding transcriptional regulator, LysR-type ECUMN_0722 774939 - 775088 + | hypothetical protein lipB 775781 - 775140 - | lipoyl-protein ligase ybeD 776145 - 775882 - | hypothetical protein TERM 1038 776203 - 776172 - R 70 -7.2 -3.95986 | opp_overlap 776178, overlap 776174 776178 CGTAACGTAATTAAA TAGCAACTCCCGCC AGAA GGCGGGAGTTTTTT ACTGATGTTTAGTAT TERM 1039 776201 - 776174 - R 75 -9.8 -3.56675 | opp_overlap 776178, overlap 776172 776178 TAACGTAATTAAATA GCAACTCCCGCC AGAA GGCGGGAGTTTT TTACTGATGTTTAGT TERM 1040 776178 - 776197 + r 100 -15 -5.2112 | opp_overlap 776178 776174 776172 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGTT TERM 1041 776197 - 776178 - R 100 -15 -3.50456 | opp_overlap 776178, overlap 776174 776172 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGTT dacA 777466 - 776255 - | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) rlpA 778694 - 777606 - | minor lipoprotein TERM 1042 778286 - 778262 - G 83 -10 -4.06633 | opp_overlap 778261 778259 GAGAAAGCGAAATAA CGCGGTCATT GCCGT AAGGACCGCG ATCATTAATGCGCAC mrdB 779817 - 778705 - | cell wall shape-determining protein TERM 1043 779758 - 779792 + g 100 -6.5 -5.80364 | CAGTAAAATCAGCAG CATTGTGGGATCGAG ATGGA CTTTATCCCAGAATG TTTTTTTATTCGGAT mrdA 781721 - 779820 - | transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) TERM 1044 780385 - 780398 + g 74 -2.3 -5.03747 | opp_overlap 780396, overlap 780376 780396 ACCGGAATGGTGTCA CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 1045 781662 - 781650 - G 77 -6.2 -4.66264 | overlap 781651 CAAAATCCCCAAAAA GGCG ACCAG CGCC CGGCGCACAAACAGC ybeA 782219 - 781752 - | hypothetical protein ybeB 782540 - 782223 - | hypothetical protein phpB 783411 - 782800 - | putative phosphatase with phosphoglycerate mutase domain nadD 784076 - 783435 - | nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent TERM 1046 783778 - 783768 - G 70 -4.6 -4.48713 | opp_overlap 783768, overlap 783769 CTGACCAATAATAAA CGCC AGC GGCA CGTCTGGCCATTGTT holA 785109 - 784078 - | DNA polymerase III, delta subunit TERM 1047 785088 - 785046 - G 100 -12 -4.45544 | gap 1, opp_overlap 785050, overlap 785048 785050 CGTTACCAAGTAAAA GATACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGT-TG TTCCGGGTACAACCG TERM 1048 785087 - 785048 - G 100 -17.1 -3.83437 | opp_overlap 785050, overlap 785046 785050 TTACCAAGTAAAAGA TACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGTT GTTCCGGGTACAACC TERM 1049 785050 - 785085 + g 100 -17.5 -3.63515 | opp_overlap 785050 785048 785046 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA TERM 1050 785085 - 785050 - G 100 -19.7 -3.49321 | opp_overlap 785050, overlap 785048 785046 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA rlpB 785690 - 785109 - | minor lipoprotein TERM 1051 785459 - 785491 + g 70 -4.7 -4.55295 | opp_overlap 785464 CGATGCTCACTTTAC CCAAACGCAGGGATG GAA CGTCCTTACGCGTGG TTTCTTTATCAAGCA TERM 1052 785625 - 785606 - G 72 -10 -3.36785 | overlap 785607 TCATAGTGGAAGGAA CCTGCGTG GTAT CACGCAGA TGCCAGCCACACCCG TERM 1053 785624 - 785607 - G 73 -11.3 -2.6175 | overlap 785606 CATAGTGGAAGGAAC CTGCGTG GTAT CACGCAG ATGCCAGCCACACCC leuS 788287 - 785705 - | leucyl-tRNA synthetase TERM 1054 785833 - 785847 + g 72 -5.6 -4.57341 | overlap 785824 785834 GTTCTTCCGTTGCGT CCACCG GAA CGGTGA TTTTTGCACGGACTT TERM 1055 787942 - 787958 + g 78 -5.1 -4.8048 | opp_overlap 787940 AGTCATAACCAAAGC CCAGC ATTTTGA GCTGG TTTTTCATGTACGCG TERM 1056 788047 - 788072 + g 74 -6.2 -4.57073 | gap 2, opp_overlap 788046 CAGGCAGACCAAACG CGTCC--CAGCC GATC GGCTGCAGGACG TTTTTGCCCAGCATA ybeL 788522 - 789004 + | hypothetical protein ybeQ 790052 - 789075 - | hypothetical protein TERM 1057 789158 - 789176 + g 76 -11 -3.30039 | opp_overlap 789147, overlap 789155 GATACAGGTCGAGAG CCTGTCGG AGA TCGACAGG TCTTCCTTCTCCGTA TERM 1058 789482 - 789492 + g 70 -6.8 -4.07687 | AATACCAGAATGCGG CGAG TGT CTCG TTTTGAGCAACGCCT TERM 1059 789973 - 789957 - G 81 -5.9 -4.81212 | GCGATTATAATAAAA CCCAATA ATA TATTGAG CATCGCAATCGCCTT ybeR 790216 - 790923 + | hypothetical protein djlB 790920 - 792347 + | putative DnaJ-class chaperone TERM 1060 792363 - 792393 + T 70 -2.5 -4.9934 | CAGTCGACGTTAATG TGCGGGAAGCCTG GCAAG TAATCTTTCCGCA TTTTTGTAATGTTGT ybeT 792911 - 792357 - | conserved hypothetical protein; putative outer membrane protein TERM 1061 793570 - 793552 - g 77 -10.2 -3.66784 | TCAGTGCGAAGACAA CGCTTCGC TAC GCGAGGCG CTAACCCTGTACAAA ybeU 793013 - 793720 + | hypothetical protein djlC 793717 - 795168 + | Hsc56 co-chaperone of HscC TERM 1062 795183 - 795226 + T 100 -15.2 -3.56643 | overlap 795186 AGGATGTGTTTTTTG CGCCGATGCCGGATGCAGCG TTTA TGCCGCATCCGGCAGCCGTG TTTAAGGGATCTCAA hscC 796898 - 795228 - | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription TERM 1063 796970 - 796933 - R 77 -9.3 -3.77089 | gap 1, overlap 796931 AAAAAGAGATAAACA GATTAAGACCACC-CAGG TAA CGCGTGGTGATCTTAATC AATGACGTGTGTTAA rihA 797917 - 796982 - | ribonucleoside hydrolase 1 gltL 798760 - 798035 - | glutamate and aspartate transporter subunit ; ATP-binding component of ABC superfamily gltK 799434 - 798760 - | glutamate and aspartate transporter subunit ; membrane component of ABC superfamily gltJ 800174 - 799434 - | glutamate and aspartate transporter subunit ; membrane component of ABC superfamily TERM 1064 799865 - 799848 - G 71 -2 -5.01811 | GGATGAAAGGAAAAA CTGAAT ATTGGG ATCCAG CTCGGCCTTAAACCA TERM 1065 800221 - 800194 - R 100 -16.4 -5.26316 | CTACTCCAGAAAAAA GAGGGTAGCAGC GTTA ACTGCTACCCTC GAAGATTGTTACCCA gltI 801252 - 800344 - | glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1066 800587 - 800598 + g 70 -5.8 -4.29326 | overlap 800578 CTTGCCGACGATTTC CCAG TTGT CTGG TTTCTTCGCTTTCGC lnt 803187 - 801649 - | apolipoprotein N-acyltransferase TERM 1067 803163 - 803137 - G 81 -10.2 -3.97307 | gap 1, opp_overlap 803137 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC TERM 1068 803137 - 803163 + g 70 -10.2 -3.20723 | gap 1, opp_overlap 803137 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC ybeX 804090 - 803212 - | putative protein involved in divalent ion export TERM 1069 804149 - 804126 - R 84 -8.8 -4.43477 | overlap 804128 GTTAGTTAATCAAAA CGCCGTCGTT AATC ACCAACGGCG GGGACATCTGCCAGT ybeY 804647 - 804180 - | putative metal-dependent hydrolase TERM 1070 804588 - 804603 + g 73 -9 -3.67611 | CTGAAACTGGCTCTC TTCCGG TAAC CCGGAA TTATCTTCACATGCC ybeZ 805723 - 804644 - | putative enzyme with nucleoside triphosphate hydrolase domain TERM 1071 805568 - 805591 + g 81 -9.6 -4.10459 | gap 1 ATCGCGGCGATTGAT CTCG-ATGCCG AGA CGGCGTTCGAG TTGTTTGATGTTGTC TERM 1072 805832 - 805807 - R 100 -13.3 -5.51046 | gap 1, overlap 805810 TAAAGAGAGAAAAAA CAAGGCCCACCG GAA CGGCGGGCCT-G AGAATTACGGCTGAT TERM 1073 805830 - 805810 - R 100 -16.1 -4.78477 | overlap 805807 AGAGAGAAAAAACAA GGCCCACCG GAA CGGCGGGCC TGAGAATTACGGCTG miaB 807261 - 805837 - | isopentenyl-adenosine A37 tRNA methylthiolase TERM 1074 806912 - 806889 - G 72 -10.2 -3.39505 | gap 1, opp_overlap 806888 806893 806901 AGCTGATATCTACAA CCGGGCTGCGG TCG CCGC-GCACGG AGTTGATCATCTCCG TERM 1075 808349 - 808386 + G 72 -9.9 -3.34043 | gap 1 GCCCTGATTGACGTT CTGGTCAACGCT-CGC AGCCATG GCGAAGCGTGGGCCAG TTATCCGATCCTCAA ubiF 807407 - 808582 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase TERM 1076 808617 - 808648 + F 100 -13 -3.55444 | opp_overlap 808626 808628 808629 GCATGCCAACCGTAG GTCGGATAAGACGC GTCA GCGTCGCATCCGAC TTTGAAGGATAAGAC TERM 1077 808731 - 808704 - f 81 -11.4 -3.2697 | opp_overlap 808710, overlap 808710 ATATACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTT AATGTGGCTGGGGTA TERM 1078 808725 - 808710 - f 93 -10.4 -5.1417 | opp_overlap 808710, overlap 808704 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 1079 808710 - 808725 + F 100 -10.4 -5.22312 | opp_overlap 808710 808704 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT ECUMN_0757 809269 - 809421 + | hypothetical protein ECUMN_0758 809774 - 810037 + | conserved hypothetical protein; putative exported protein TERM 1080 810240 - 810217 - T 100 -13.8 -4.56133 | opp_overlap 810212, overlap 810219 GCTCAATAACTAAAA CAGCCCCGGA TTTC TCCGGGGCAG TACCGCATTTCTTAC TERM 1081 810238 - 810219 - T 100 -15 -3.88577 | opp_overlap 810212, overlap 810217 TCAATAACTAAAACA GCCCCGGA TTTC TCCGGGGC AGTACCGCATTTCTT asnB 811916 - 810252 - | asparagine synthetase B TERM 1082 810375 - 810351 - G 80 -11.3 -3.40611 | overlap 810349 TTTAGCGGAAGAACA CGCGACGGACG GGC CGCCCGGCACG CACTCAGCGGCGCTC TERM 1083 810616 - 810626 + g 71 -3.2 -4.87318 | overlap 810610 GCTTCAAAACATTCA CGCA GGA TGTG TTTTTCCATTTTGCC TERM 1084 811987 - 811973 - R 95 -7.8 -5.40072 | overlap 811982 811985 GCTTGTTTAAAAAAA TGCCGC AAA GCAGCA CTGTGCGCAAGCGAT TERM 1085 812284 - 812309 + r 86 -13.3 -3.06162 | opp_overlap 812263 812288 CGCTTGTCATCAGAG CCAACCACGTC CGCA GACGTGGGTGG TATTCAGATAACGTC TERM 1086 812305 - 812288 - R 81 -11.3 -3.14468 | opp_overlap 812284, overlap 812263 TGTCATCAGAGCCAA CCACGTC CGCA GACGTGG GTGGTATTCAGATAA nagD 813065 - 812313 - | NMP phosphatase nagC 814333 - 813113 - | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine nagA 815490 - 814342 - | N-acetylglucosamine-6-phosphate deacetylase TERM 1087 814645 - 814635 - G 70 -4 -4.59773 | TTTTACCCGCAAAAA TGAA CTG TTCA ATGTTGGCACCTGCT TERM 1088 815540 - 815515 - R 72 -6.9 -4.15748 | gap 1, overlap 815516 CGATTTTAAAAAATA TTGCCCTGAGCA AGG TG-TCAGGGCAG GGATAACAATTACAG TERM 1089 815539 - 815516 - R 73 -10.4 -3.08726 | gap 1, overlap 815515 GATTTTAAAAAATAT TGCCCTGAGCA AGG TG-TCAGGGCA GGGATAACAATTACA nagB 816350 - 815550 - | glucosamine-6-phosphate deaminase TERM 1090 815964 - 815977 + g 100 -6.7 -5.52023 | AAACAGATGAATTTT TCCGT AAGA ACGGA TTTTTTCTTCATACT TERM 1091 816738 - 816760 + G 74 -11.2 -3.1886 | overlap 816750 TACAGCTCCCTATCG CGGTGCTGCC GGT GGCGGCGCTG TTGCTGCGATTCGGT nagE 816683 - 818629 + | fused N-acetyl glucosamine specific PTS enzymes: IIC component ; IIB component ; IIA component TERM 1092 818680 - 818702 + F 100 -12 -6.15828 | opp_overlap 818680 ATCCAACAATGACAA GCGGTGGAGA TCT TCTCTGCCGC TTTTTTTTTCATCAA TERM 1093 818730 - 818740 + F 70 -5.4 -4.43272 | opp_overlap 818730 CAATCATCCCCATAA TCTC AGT GAGA TTTTCGATTTTCACT glnS 818832 - 820496 + | glutamyl-tRNA synthetase TERM 1094 820567 - 820583 + F 95 -7.9 -5.4588 | opp_overlap 820567 820568, overlap 820568 GCAAACAATTCAAAA TGCCGCG CTC TGCGGCG TTTTTTCTGCTTTTC TERM 1095 820568 - 820582 + F 77 -9.2 -3.85088 | opp_overlap 820568 820567, overlap 820567 CAAACAATTCAAAAT GCCGCG CTC TGCGGC GTTTTTTCTGCTTTT TERM 1096 821795 - 821775 - g 74 -8.3 -3.86897 | GGTACGCGCGATAAA GTTGACGAT CGC AGCGTCAAC GACCTTTACGACGGC TERM 1097 822057 - 822044 - g 81 -6.7 -4.63527 | GTATGACTTGAAAAA CTGGA ATCT TCCAG GCTTCGCCATCGGCG ybfM 820944 - 822350 + | putative outer membrane porin ybfN 822400 - 822726 + | putative lipoprotein TERM 1098 822727 - 822746 + T 78 -5.7 -5.011 | opp_overlap 822727 822724 822729 AGTAATAACAAATAA GTGAGAG CTGTAA CTCTCGC TTTTCTTATTTCCCT TERM 1099 822767 - 822796 + T 82 -12.3 -2.72463 | opp_overlap 822773, overlap 822773 TTATTTCCCTTGCAT AAAAAAGCCAACC TGCA GGTTGGCTTTTTC TCATTCAGGCTGGCT TERM 1100 822790 - 822773 - T 100 -11.3 -5.24129 | opp_overlap 822767 822773 CCCTTGCATAAAAAA GCCAACC TGCA GGTTGGC TTTTTCTCATTCAGG TERM 1101 822773 - 822790 + T 100 -11.3 -4.98255 | opp_overlap 822773, overlap 822767 CCCTTGCATAAAAAA GCCAACC TGCA GGTTGGC TTTTTCTCATTCAGG fur 823257 - 822811 - | DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport TERM 1102 823540 - 823513 - g 100 -16.4 -3.19463 | overlap 823515 GGCATTATCTATTAA TACGGCGTAGAC ATGA GTCTACGCCGCA TCACATCAGGCATTG TERM 1103 823538 - 823515 - g 100 -16.8 -3.15996 | overlap 823513 CATTATCTATTAATA CGGCGTAGAC ATGA GTCTACGCCG CATCACATCAGGCAT ECUMN_0769 823302 - 823556 + | hypothetical protein fldA 824076 - 823546 - | flavodoxin 1 ybfE 824509 - 824216 - | LexA regulated protein TERM 1104 824595 - 824632 + r 100 -14.8 -4.77157 | gap 1, opp_overlap 824581 824576 824616, overlap 824596 AGCGCGATGAGTCAC GCCAACGCCCGCG-CGC GGAAA GCGACGCGGGCGCTGGG TTTTTAATCAGTTGC TERM 1105 824596 - 824631 + r 100 -18.3 -3.45571 | gap 1, opp_overlap 824576 824616, overlap 824595 GCGCGATGAGTCACG CCAACGCCCGCG-CGC GGAAA GCGACGCGGGCGCTGG GTTTTTAATCAGTTG ybfF 825413 - 824649 - | putative esterase TERM 1106 825802 - 825820 + G 81 -11 -3.60865 | opp_overlap 825802 825801, overlap 825797 ACGATTAAAGACAAG GTTCGCGC AAT GCGTGAAC TTCTGCTTTCGGATG seqA 825598 - 826143 + | regulatory protein for replication initiation TERM 1107 826204 - 826183 - g 78 -10.9 -3.42621 | opp_overlap 826178 AATGGCAATCCACAA TCGTGCAGG CCAA CCTGCACAA CAGAGTGATTTGATT TERM 1108 827621 - 827637 + G 71 -9.4 -3.49102 | GCGCGCCTGACGGCG GCACCG GGCAA CGGTGC TTCTATCGGCGGTCT pgm 826169 - 827809 + | phosphoglucomutase TERM 1109 827829 - 827848 + F 100 -11.4 -5.32944 | opp_overlap 827829 ATTAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTACTTATGAC TERM 1110 827848 - 827829 - f 100 -9.2 -5.39905 | opp_overlap 827829 ATTAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTACTTATGAC TERM 1111 828041 - 828015 - g 72 -5.9 -4.29845 | opp_overlap 828038, overlap 828008 828031 CAAGGGAATTCAAAA TGAAGACCAAA AGGAG TCTGGTCGTCA GAGTGGCATTAATTA TERM 1112 828399 - 828412 + G 74 -2.3 -5.09895 | TTAATGAGGATTATG TCAGC GAAA GCGGA TTTTTTGGCTCGATG ybfP 828014 - 828508 + | hypothetical protein kdpE 829297 - 828620 - | DNA-binding response regulator in two-component regulatory system with KdpD kdpD 831978 - 829294 - | fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein ; sensory histidine kinase TERM 1113 831503 - 831473 - G 74 -2.5 -5.08824 | gap 1, opp_overlap 831479, overlap 831476 GCGGCATCGAAAAAA GGAT-CGGGCACGG TTTC CCGTACCTGAATTC CGGTGACGCCGCTGA TERM 1114 831648 - 831627 - G 73 -11.6 -2.66692 | opp_overlap 831627, overlap 831626 TAGGATGACGAGAAC CTGGCGCA TTACTG TGCGCCAG TTCGTCCATTAAGAT TERM 1115 831627 - 831648 + g 81 -12.3 -3.22091 | opp_overlap 831626 831627 TAGGATGACGAGAAC CTGGCGCAT TACT GTGCGCCAG TTCGTCCATTAAGAT kdpC 832543 - 831971 - | potassium translocating ATPase, subunit C kdpB 834600 - 832552 - | potassium translocating ATPase, subunit B TERM 1116 832850 - 832833 - G 77 -9.9 -3.61517 | opp_overlap 832831 ACGCCGCCGGAATAA TGGCGAA GTAT TTCGCCA CATCGTTGGCAATGC TERM 1117 833590 - 833606 + g 79 -2.2 -5.21709 | gap 1, overlap 833591 CAGCGAAGCCAGTTG TGC-GGC GTTG GCCAGCG TTTTTTCCTCTACGC TERM 1118 833894 - 833878 - G 74 -7.9 -4.11216 | overlap 833879 GCCCCACGCGGAAAA CGGCCAC AGC GTGGCGG TTGCCAGTAAAAAGA kdpA 836296 - 834623 - | potassium translocating ATPase, subunit A TERM 1119 835154 - 835142 - G 70 -5.5 -4.35483 | CGCCAGCAGAACAAA CAGCA TCA TGCCG TAAAGACCAGAACCG TERM 1120 836498 - 836487 - H 80 -5.8 -5.14894 | opp_overlap 836487 AAAAAAGTATAAAAA TGGC AAAA GCCA TGATTTAACTAATGA ybfA 836698 - 836904 + | hypothetical protein TERM 1121 836931 - 836952 + F 100 -17.3 -6.23209 | opp_overlap 836931 TGAATACATTGAAAA CCGCCAGCG GAAA CGCTGGCGG TTTTTTTTTGGTTAG TERM 1122 836952 - 836931 - f 100 -17.3 -4.28375 | opp_overlap 836931 TGAATACATTGAAAA CCGCCAGCG GAAA CGCTGGCGG TTTTTTTTTGGTTAG TERM 1123 837111 - 837090 - f 83 -11.7 -3.14132 | GCTCCTGGGGATTAA TGAGAGACA TCCA TGTCTCTCA CCGAAGGTCAGCCTG TERM 1124 837126 - 837165 + F 76 -10.2 -3.37464 | gap 1, opp_overlap 837139, overlap 837139 ACCGAAGGTCAGCCT GCGACTGGGCAAATTCGTT CCT GACGAATTTGTC-ACTCGC TTGTCGCCTTCCTGC ECUMN_0782 837429 - 837782 + | hypothetical protein ECUMN_0783 837865 - 838149 + | hypothetical protein ECUMN_0784 838162 - 838569 + | hypothetical protein TERM 1125 839001 - 838987 - g 82 -11.4 -3.50572 | opp_overlap 838987 ATTGATTCCACAGAA CGCCAG CAG CTGGCG GCGCTTATCGACAGT ybgA 838654 - 839163 + | hypothetical protein TERM 1126 840134 - 840124 - g 81 -8.2 -4.30014 | opp_overlap 840123 840124 GGCAGGAAGGCAAAA CGGG ATA CCCG ATTGTCGATGCTGCC phr 839160 - 840578 + | deoxyribodipyrimidine photolyase, FAD-binding TERM 1127 840605 - 840573 - T 87 -13.6 -2.98381 | opp_overlap 840574, overlap 840570 GAAGCGAGGAAAGGA GCCTGATAAAACGC AGCGA GCGTTTTATCAGGT ATGGTGCTGGCCTGT TERM 1128 840574 - 840604 + T 100 -17.1 -2.82834 | opp_overlap 840573 840570 AAGCGAGGAAAGGAG CCTGATAAAACGC AGCGA GCGTTTTATCAGG TATGGTGCTGGCCTG ybgH 842101 - 840620 - | putative transporter TERM 1129 842872 - 842901 + G 72 -6.3 -4.42386 | overlap 842874 TGAGGTGGTCCAGCG CGTTGCCTGGTGC ACGG GCGGCGGGCAAAG TTTTATCGATAGCGC TERM 1130 842913 - 842937 + G 70 -3.5 -4.71426 | gap 1, overlap 842912 842916 AAAGTTTTATCGATA GCG-CCGCGC GTTTTG GCGTGGATGC TTTTATTACTGGCGA ybgI 842372 - 843115 + | conserved hypothetical protein; putative metal-binding protein ybgJ 843138 - 843794 + | putative hydrolase subunit ybgK 843788 - 844720 + | putative hydrolase subunit TERM 1131 844886 - 844903 + G 78 -8.5 -4.25104 | TGGCGCTCATCCGAG TTTTCCC GACA GGGAAAA TTTTGGTCGCAGAGC ybgL 844710 - 845444 + | putative lactam utilization protein, UPF0271 family nei 845480 - 846271 + | endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase abrB 847314 - 846268 - | hypothetical protein ybgO 848527 - 847466 - | hypothetical protein ybgP 849255 - 848524 - | putative exported chaperone, PapD family TERM 1132 848883 - 848899 + g 93 -2.1 -5.60993 | opp_overlap 848886, overlap 848885 848886 GGATGGCGACCTGCA GAACGGC ATG GCCGCTG TTTTTTTCTGGGGAG TERM 1133 848885 - 848897 + g 70 -4.7 -4.45201 | opp_overlap 848886, overlap 848883 848886 ATGGCGACCTGCAGA ACGGC ATG GCCGC TGTTTTTTTCTGGGG TERM 1134 848956 - 848944 - G 71 -3.3 -4.8667 | CATATTGTAGAAAAA TAGCG TTT CGCGA TCGCCCGGTAATTTC TERM 1135 849044 - 849062 + g 70 -4.5 -4.47485 | overlap 849043 TGTATCGGTGGCAGG GCGACCA GAAGA TCGTCGC TTTTCTCCCCTTTTT ybgQ 851772 - 849271 - | conserved hypothetical protein; putative outer membrane protein TERM 1136 850403 - 850413 + g 70 -6.8 -4.0648 | GAAATCGTGCTGTTA GTGG CAT CCAC TTGTTTGCTGTAATT TERM 1137 851481 - 851500 + g 72 -4.3 -4.63184 | AATCATTAATACACG GAATGGT TTGGTC ACCGTTC TTTTTCCAGTCAATT TERM 1138 851572 - 851586 + g 75 -7 -4.37711 | AACAAAATATTCACC GGGAGC AAT GCCCCC TTTTCCCTTTAATAA TERM 1139 851770 - 851753 - G 100 -14.1 -4.21351 | AAATATTTGAAGAAA GGCGGCG ATGA CGCCGCC AAAGTGATACTTATT ECUMN_0797 852434 - 851781 - | putative fimbrial-like adhesin protein TERM 1140 852595 - 852608 + r 79 -5.3 -5.11937 | TCATTCTGCTCAGTA TGTGA CTTG TCACA TTTTTTCACCTTATT TERM 1141 852708 - 852683 - R 95 -7.6 -5.38047 | gap 1 CAGCCATATAAAAAA GAACCCGCTCT ATTAA AG-GCGGGTCC GGAAAGTAAACGGCT gltA 854020 - 852737 - | citrate synthase TERM 1142 854330 - 854340 + H 70 -5.4 -4.32436 | CTTCATAACTTTTAC GCAT TAT ATGC TTTTCCTAGTAATGT TERM 1143 854828 - 854839 + G 70 -5.8 -4.1822 | CTCCATCGCGTTTCC GGTG TGAT CACC TTTGTTGCAGTGGGC sdhC 854729 - 855118 + | succinate dehydrogenase, membrane subunit, binds cytochrome b556 sdhD 855112 - 855459 + | succinate dehydrogenase, membrane subunit, binds cytochrome b556 sdhA 855459 - 857225 + | succinate dehydrogenase, flavoprotein subunit sdhB 857241 - 857957 + | succinate dehydrogenase, FeS subunit TERM 1144 857996 - 857963 - f 79 -11.7 -2.65279 | opp_overlap 857976, overlap 857973 857982 857983 TAATGCGTAAACCCA GGCCTGATAAGACGC ACAA GCGTCGCATCAGGCA ACCAGTGCCGGATGC TERM 1145 858016 - 857982 - f 75 -9.9 -3.43961 | opp_overlap 857976 858012, overlap 857973 857963 857983 857998 858001 TGATAAGACGCACAA GCGTCGCATCAGGCA ACCAG TGCCGGATGCGGCGT GAACGCCTTATCCGG TERM 1146 858015 - 857983 - f 84 -13.4 -2.65894 | opp_overlap 857976 858012, overlap 857973 857963 857982 857998 858001 GATAAGACGCACAAG CGTCGCATCAGGCA ACCAG TGCCGGATGCGGCG TGAACGCCTTATCCG TERM 1147 858096 - 858053 - f 70 -6.6 -4.0683 | opp_overlap 858088, overlap 858054 858068 858094 AAAGAAATGCAGAAA TCGTAGGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAAACAG CGCCGGATGCGGCGT TERM 1148 858095 - 858054 - f 73 -10.1 -3.02471 | opp_overlap 858088, overlap 858053 858068 858094 AAGAAATGCAGAAAT CGTAGGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAAACA GCGCCGGATGCGGCG TERM 1149 858197 - 858140 - f 73 -4.3 -4.77173 | gap 1, opp_overlap 858149 858150, overlap 858141 858149 858150 858188 GGCCTACAAAAGAAA TGCAGGAAATCTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAGG-TTCCTTCG CGAGCCACTACGTAG TERM 1150 858189 - 858149 - f 71 -7.7 -3.83771 | opp_overlap 858149 858150, overlap 858141 858140 858150 858188 AAGAAATGCAGGAAA TCTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAGG TTCCTTCGCGAGCCA TERM 1151 858188 - 858150 - f 78 -11.2 -2.89178 | opp_overlap 858150 858149, overlap 858149 858141 858140 AGAAATGCAGGAAAT CTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAG GTTCCTTCGCGAGCC TERM 1152 858866 - 858850 - g 83 -5.1 -5.11063 | AGCACCGAAGAAAAA CGCTG GATCCAA CAGCG TATCGAGTCTGGTCG TERM 1153 858922 - 858910 - g 100 -7.7 -5.48063 | AGCGAAGAGAAAAAA CGCTT CTT AAGCG AACTGACCGCCGCTG TERM 1154 859156 - 859129 - g 71 -2 -5.00616 | gap 1, opp_overlap 859137, overlap 859131 GTGCTGGGTAAAAAA CCGCAAGACTTGT TCG ACGAGT-TTGCCG GTAAACATAAAGAAC sucA 858307 - 861108 + | 2-oxoglutarate decarboxylase, thiamin-requiring TERM 1155 861670 - 861654 - g 70 -3.6 -4.67353 | GCACGTAGCGAAAAA CGTGTC CCGAT GACTCG CCTGCGTAAGCGTGT sucB 861123 - 862340 + | dihydrolipoyltranssuccinase TERM 1156 862435 - 862404 - f 91 -13 -3.17075 | opp_overlap 862410 862411 862413 TCTCCGGCAATTGAA GCCTGATGCGACGC TGAC GCGTCTTATCAGGC CTACGGGGACCATCA TERM 1157 862487 - 862456 - f 74 -10.8 -2.57795 | opp_overlap 862466 862467, overlap 862452 862466 862467 GGGACCATCAATGTA GGTCGGATAAGGCG CTCG CGCCGCATCCGACA CGCGATGCCTGATGC TERM 1158 862514 - 862466 - f 100 -13.7 -3.30243 | opp_overlap 862466 862467 862503, overlap 862456 862452 862467 ATGTAGGTCGGATAA GGCGCTCGCGCCGCATCCGACAC GCG ATGCCTGATGCGACGCTTGCGCG TCTTATCAGGCCTAC TERM 1159 862513 - 862467 - f 100 -17.2 -2.57931 | opp_overlap 862466 862467 862503, overlap 862456 862452 862466 TGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACAC GCG ATGCCTGATGCGACGCTTGCGC GTCTTATCAGGCCTA TERM 1160 862467 - 862513 + F 79 -12.1 -2.5294 | opp_overlap 862456 862452 862467 862466, overlap 862466 862503 TGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACA CGCGA TGCCTGATGCGACGCTTGCGC GTCTTATCAGGCCTA TERM 1161 863040 - 863020 - g 73 -4 -4.81249 | gap 1 GTGGAAATCGAAAAA GTGGCGGAA GAAA CTCCGC-AC CTGATCCATAAAGTT TERM 1162 863686 - 863673 - g 76 -9.5 -3.73068 | TCTGGAAGGTAACAA CGCCG AACT CGGCG CGAAGAAACTGGCTG sucC 862615 - 863781 + | succinyl-CoA synthetase, beta subunit sucD 863781 - 864650 + | succinyl-CoA synthetase, NAD(P)-binding, alpha subunit TERM 1163 864726 - 864743 + G 100 -11.3 -5.31456 | GGTTTCGACATGGTT GGCCATC GTAT GATGGCC TTTTTTATGCCTTAA TERM 1164 864942 - 864929 - g 75 -4.5 -4.85545 | opp_overlap 864929 AGTAAATCAACAAAA GCGAT GTTC ACCGC TTATCGTCAAGTCGT ECUMN_0807 864695 - 865045 + | hypothetical protein TERM 1165 865130 - 865160 + F 86 -10.6 -3.93117 | opp_overlap 865133, overlap 865133 TAATGTGATTCCGGA TAATTCGAAAGGCG CTG TGCTTTTCGGATTA TTATTATCTGATTAA TERM 1166 865133 - 865157 + F 74 -7.9 -4.07466 | opp_overlap 865133, overlap 865130 TGTGATTCCGGATAA TTCGAAAGGCG CTG TGCTTTTCGGA TTATTATTATCTGAT ECUMN_0808 865316 - 866221 + | putative LysR-like transcriptional regulator TERM 1167 866252 - 866224 - T 100 -16 -4.24948 | opp_overlap 866225, overlap 866225 GCAGGAGATGTAAAA CCTGCGCCTGGC GGGAT GCCAGGCGCAGT TATTACCAGTCGATG TERM 1168 866251 - 866225 - T 100 -19.5 -3.14487 | opp_overlap 866225, overlap 866224 CAGGAGATGTAAAAC CTGCGCCTGGC GGGAT GCCAGGCGCAG TTATTACCAGTCGAT TERM 1169 866225 - 866251 + T 100 -20.2 -3.63694 | opp_overlap 866225 866224 CAGGAGATGTAAAAC CTGCGCCTGGCG GGA TGCCAGGCGCAG TTATTACCAGTCGAT ECUMN_0809 866857 - 866255 - | Cob(I)yrinic acid a,c-diamide adenosyltransferase ECUMN_0810 868519 - 866867 - | Fumarate hydratase class I, beta subunit, aerobic (Fumarase) TERM 1170 867170 - 867148 - G 73 -12 -2.80074 | overlap 867145 867143 CTTTCGATAACATTA CCAGACTGCC GCC AGCAGCCTGG AAGGTATCGACATAA TERM 1171 868001 - 867987 - G 72 -4.3 -4.68124 | TTAACACAGAGAAAA TGGTA CTCAT TACCA GCGACAGCGCTGATA TERM 1172 868377 - 868361 - G 81 -8.7 -4.38154 | AGAGGCTTCATAAAA TGCCTGC CGG GCAAGCA GCGTTAATGCTTCAG ECUMN_0811 869928 - 868627 - | putative symport protein TERM 1173 869952 - 869985 + r 74 -11.1 -2.74371 | opp_overlap 869944 869953, overlap 869950 ATCAGAATCAGGAGA AGTAGATGCCCGAAT AGAG ATTCAGGCATCTACC TGCTATTACAACCTT TERM 1174 869984 - 869953 - R 100 -16.8 -3.48684 | opp_overlap 869952 869950, overlap 869944 TCAGAATCAGGAGAA GTAGATGCCCGAAT AGAG ATTCAGGCATCTAC CTGCTATTACAACCT ECUMN_0812 870385 - 870068 - | hypothetical protein ECUMN_0813 871752 - 870382 - | putative 3-methylaspartate ammonia-lyase, glutamate mutase ECUMN_0814 872997 - 871756 - | Methylaspartate ammonia-lyase (Beta-methylaspartase) TERM 1175 871991 - 872003 + g 70 -4.7 -4.54727 | ATGTTGTGAATACTG CCCAG ATC CGGGG TTTTGATTTGCACCA TERM 1176 872802 - 872815 + g 81 -9.5 -4.09685 | opp_overlap 872794 872779 CAGCACAGTCACCTA CGGCG ACCG CGCCG TTTTCCAGAATCAAC ECUMN_0815 874442 - 872997 - | Methylaspartate mutase E chain (Glutamate mutase epsilon subunit) glmL 875849 - 874461 - | glutamate mutase, large subunit, B12-dependent TERM 1177 874902 - 874882 - G 71 -2.3 -4.98857 | opp_overlap 874886 AGGTAATGATAAAAA GCGTCCAGC TGT GCGGGTTGC TGAGCAAAATTCACA ECUMN_0817 876361 - 875849 - | Methylaspartate mutase S chain (Glutamate mutase sigma subunit) ECUMN_0818 876652 - 876485 - | hypothetical protein ECUMN_0819 877268 - 876846 - | hypothetical protein TERM 1178 876969 - 876959 - G 83 -5.4 -5.11613 | ACAGTATCGAAAAAA TGAC TGT GTCA GAACTAATTTCAATT ECUMN_0820 878293 - 877349 - | hypothetical protein TERM 1179 878748 - 878761 + H 74 -3.9 -4.99435 | CATATTTGGTTGGTT TTGAT ATAA ATCAA TTTTTAATTCTTGAA cydA 879099 - 880667 + | cytochrome d terminal oxidase, subunit I cydB 880683 - 881822 + | cytochrome d terminal oxidase, subunit II TERM 1180 881985 - 882012 + G 81 -12.1 -3.21595 | gap 1, opp_overlap 881991, overlap 881991 882004 CTTGTATGCGGTAAT GGACAAGCGCCC CCTGC GGGCGCTT-TCC TTCGTGATGGCGCTT TERM 1181 882007 - 881991 - g 76 -10.8 -3.41878 | opp_overlap 881985 881991 882004 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 1182 881991 - 882007 + G 86 -10.8 -3.97042 | opp_overlap 881991, overlap 881985 882004 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG ybgE 881950 - 882243 + | conserved hypothetical protein; putative inner membrane protein TERM 1183 882264 - 882289 + F 82 -7.6 -4.63184 | opp_overlap 882265, overlap 882265 AATTCTCTTTAAAAA ATTATGGGCC GCTCCA GGCCCATAAA TTTTTACGCTCCCTT TERM 1184 882288 - 882265 - f 100 -11.1 -5.00884 | opp_overlap 882264 882265 ATTCTCTTTAAAAAA TTATGGGCC GCTCCA GGCCCATAA ATTTTTACGCTCCCT TERM 1185 882265 - 882288 + F 80 -11.1 -3.37188 | opp_overlap 882265, overlap 882264 ATTCTCTTTAAAAAA TTATGGGCC GCTCCA GGCCCATAA ATTTTTACGCTCCCT ybgC 882393 - 882797 + | acyl-CoA thioesterase tolQ 882794 - 883486 + | membrane spanning protein in TolA-TolQ-TolR complex tolR 883490 - 883918 + | membrane spanning protein in TolA-TolQ-TolR complex TERM 1186 884353 - 884336 - g 77 -3.4 -5.1244 | gap 1, overlap 884339 TCAGGAACAGAAAAA GCAGGCT GAAGA AGCC-GC AAAACAGGCCGAGTT TERM 1187 884554 - 884538 - g 100 -9.3 -5.27923 | GAAGCGCAGAAAAAA GCCGAGG CAG CCGCGGC GGCACTGAAGAAGAA TERM 1188 884716 - 884694 - g 72 -6.2 -4.32177 | overlap 884676 884675 884695 GCAGCTGATAAGAAA GCGGCAGC AGAGAAA GCTGCAGC CGACAAAAAAGCAGC TERM 1189 884746 - 884727 - g 87 -4.9 -5.26316 | overlap 884728 884739 884740 GCAGCCGACAAAAAA GCAGCAG AAAAAG CGGCTGC TGAAAAGGCAGCAGC TERM 1190 884761 - 884739 - g 83 -6.2 -4.95806 | overlap 884727 884728 884740 884757 AAAGCAGCAGAAAAA GCGGCTGC TGAAAAG GCAGCAGC TGATAAGAAAGCAGC TERM 1191 884794 - 884772 - g 90 -9.8 -4.32177 | overlap 884757 884787 GCAGCTGATAAGAAA GCAGCGGC AGAAAAA GCCGCCGC AGACAAAAAAGCGGC TERM 1192 884812 - 884787 - g 85 -6.8 -4.84359 | overlap 884772 884805 GCAGCGGCAGAAAAA GCCGCCGC AGACAAAAAA GCGGCAGC TGCAAAAGCAGCAGC TERM 1193 884857 - 884805 - g 100 -12.6 -5.36441 | opp_overlap 884850, overlap 884787 884835 884850 884851 GCCGCAGACAAAAAA GCGGCAGCTGCAAAAGCAGCAGCT GAAAA AGCCGCTGCAGCAAAAGCTGCCGC AGAGGCAGATGATAT TERM 1194 884863 - 884835 - g 100 -13.1 -4.63527 | opp_overlap 884850, overlap 884805 884850 884851 GCAGCAGCTGAAAAA GCCGCTGCAGCAA AAG CTGCCGCAGAGGC AGATGATATTTTCGG tolA 883983 - 885248 + | membrane anchored protein in TolA-TolQ-TolR complex tolB 885381 - 886673 + | periplasmic protein pal 886708 - 887229 + | peptidoglycan-associated outer membrane lipoprotein TERM 1195 887293 - 887309 + G 100 -15.1 -3.40403 | TTACTGGTTGGTATA GCGGCCC CCT GGGCCGC TTATGCTCAGGCACC TERM 1196 887491 - 887478 - g 70 -5.3 -4.29738 | TCAGATTCAGGAAAA TCAGT ATCA ACTGA ATCAGGTCGTGGAGC ybgF 887239 - 888030 + | putative RNA binding protein TERM 1197 888073 - 888038 - f 73 -9.1 -3.4285 | opp_overlap 888042, overlap 888040 CGATGTAATGCATAA CACACGACCAGAAGT CGCATT ATTTCTGGTCGTGTC GTGCGAATCATAAGC TERM 1198 888071 - 888040 - f 85 -11.7 -3.28368 | opp_overlap 888042, overlap 888038 ATGTAATGCATAACA CACGACCAGAAGT CGCATT ATTTCTGGTCGTG TCGTGCGAATCATAA TERM 1199 888042 - 888069 + F 74 -10.7 -2.79302 | opp_overlap 888040 888038 GTAATGCATAACACA CGACCAGAAGT CGCATT ATTTCTGGTCG TGTCGTGCGAATCAT TERM 1200 888325 - 888310 - f 73 -9 -3.52941 | overlap 888307 888324 AAACGTGAAGGATAA CGTTGC GTCA GCAACG GCCCGAAGGGCGAGA TERM 1201 888820 - 888805 - f 73 -9 -3.51597 | overlap 888819 AAGCGTGAAGGATAA CGTTGC GCCA GCAACG GCCCGAAGGGCGAGC TERM 1202 889130 - 889098 - f 72 -9.9 -3.19463 | opp_overlap 889099 889107, overlap 889099 889107 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATACTCAA TERM 1203 889099 - 889129 + F 89 -14.9 -2.90212 | opp_overlap 889098 889099 889107, overlap 889107 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATACTCA TERM 1204 889129 - 889099 - f 84 -13.4 -2.51464 | opp_overlap 889099 889107, overlap 889098 889107 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATACTCA TERM 1205 889107 - 889121 + F 95 -8.5 -5.24989 | opp_overlap 889099 889098 889107, overlap 889099 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1206 889121 - 889107 - f 93 -9.2 -5.17576 | opp_overlap 889107 889099, overlap 889099 889098 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1207 889171 - 889149 - f 81 -10.6 -3.43773 | overlap 889147 889150 TGCGATACTCAAAGA TTCGAACCTG CAG CAGGTTCGAG TTGAGCGCAGCGAAA TERM 1208 889170 - 889150 - f 87 -14.1 -2.65942 | overlap 889149 889147 GCGATACTCAAAGAT TCGAACCTG CAG CAGGTTCGA GTTGAGCGCAGCGAA TERM 1209 889214 - 889190 - f 76 -8.6 -3.96483 | gap 2 AGCGCAGCGAAACAA CGGAGCCGCTCG CGG CGA-CGGC-CCG AAGGGCGAGCGAAGC TERM 1210 889286 - 889254 - f 72 -9.9 -3.19463 | opp_overlap 889255 889263, overlap 889255 889263 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATACTCAA TERM 1211 889255 - 889285 + F 89 -14.9 -2.90212 | opp_overlap 889254 889255 889263, overlap 889263 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATACTCA TERM 1212 889285 - 889255 - f 84 -13.4 -2.51464 | opp_overlap 889255 889263, overlap 889254 889263 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCGATACTCA TERM 1213 889277 - 889263 - f 93 -9.2 -5.17576 | opp_overlap 889255 889263, overlap 889255 889254 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 1214 889263 - 889277 + F 95 -8.5 -5.24989 | opp_overlap 889263 889255 889254, overlap 889255 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 1215 889370 - 889346 - f 76 -8.6 -3.96483 | gap 2 AGCGCAGCGAAACAA CGGAGCCGCTCG CGG CGA-CGGC-CCG AAGGGCGAGCGAAGC TERM 1216 889442 - 889410 - f 72 -9.9 -3.19463 | opp_overlap 889411 889419, overlap 889411 889419 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATTCAGGCATCTCTC TERM 1217 889411 - 889441 + F 89 -14.9 -3.0395 | opp_overlap 889410 889411 889419, overlap 889419 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATTCAGGCATCTCT TERM 1218 889441 - 889411 - f 84 -13.4 -2.51464 | opp_overlap 889411 889419, overlap 889410 889419 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATTCAGGCATCTCT TERM 1219 889419 - 889433 + F 95 -8.5 -5.27779 | opp_overlap 889411 889410 889419, overlap 889411 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATTCAG TERM 1220 889433 - 889419 - f 93 -9.2 -5.17576 | opp_overlap 889419 889411, overlap 889411 889410 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATTCAG nadA 889686 - 890729 + | quinolinate synthase, subunit A TERM 1221 891477 - 891447 - g 100 -15.5 -3.15544 | CCGGATGTGGATCAA CAGCGCACGCGAA AGAGG TTCACGCGCGCTG TCCCATTAATGGTGA pnuC 890767 - 891486 + | nicotinamide mononucleotide transporter zitB 892424 - 891483 - | zinc efflux system TERM 1222 892516 - 892497 - R 90 -9.3 -4.78661 | opp_overlap 892496 892497 AGGGAAAAATTAAAA GGGAGAG ACTCCG CTCTCCC ATTATTGGCTATTTC TERM 1223 892547 - 892601 + r 77 -4.3 -5.16841 | gap 1 GCAGGGTTACTGCGT GGTACCGTC-GGTTTTGGTATCGACA TCAT TGTTGATGCCATCACCAGTTTGTACC TTTTTATTGATATCC ybgS 892918 - 892538 - | hypothetical protein TERM 1224 893097 - 893109 + H 74 -3.3 -5.16071 | AGATCTCGTTTTTCG CGACA ATC TGGCG TTTTTCTTGCTAATT aroG 893234 - 894286 + | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible TERM 1225 894361 - 894349 - T 71 -9.1 -3.30124 | overlap 894351 CCGTAGCCCTGACAA GACGC GTA GCGTC GCATCAGGCAATGTG TERM 1226 894406 - 894426 + T 80 -8.3 -4.2687 | opp_overlap 894406 ACGACAAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTTAAG TERM 1227 894426 - 894406 - T 100 -8.3 -5.73978 | opp_overlap 894406 ACGACAAACAAAAAA GCCGACT CACTTGC AGTCGGC TTTCTCATTTTTAAG gpmA 895204 - 894452 - | phosphoglyceromutase 1 TERM 1228 895072 - 895087 + g 74 -6.1 -4.45664 | overlap 895070 AACCTTCCTCTTTCA GCAGC TTACCT GCTGC TTTTGCTTCGCTTAC TERM 1229 895400 - 895384 - R 82 -10.1 -4.01853 | overlap 895374 CAATATGAGGATAAA GCCCTCA GTA CGAGGGC TTAACATTACTCAGC galM 896447 - 895407 - | galactose-1-epimerase (mutarotase) galK 897589 - 896441 - | galactokinase galT 898639 - 897593 - | galactose-1-phosphate uridylyltransferase TERM 1230 898426 - 898442 + g 81 -6.5 -4.83615 | overlap 898427 TAGTGAAAACGTAAG TCCCGGT GTA ATCGGGG TTTTTATCGCCAGTC galE 899665 - 898649 - | UDP-galactose-4-epimerase TERM 1231 899153 - 899170 + g 70 -4.1 -4.60041 | gap 1, overlap 899155 899156 GCGCAGCAGGGCAAT GCTCCAGT CCG GCTGG-GC TTTTTGCAGATCGGT modF 901400 - 899928 - | fused molybdate transporter subunits of ABC superfamily: ATP-binding components ECUMN_0845 901474 - 901328 - | hypothetical protein modE 902256 - 901468 - | DNA-binding transcriptional dual regulator TERM 1232 901558 - 901574 + g 81 -10.9 -3.57462 | CGCTTCATTTACCGG CACTGTG GCG CACAGTG TTTGCCCGTCGGGTA ybhT 902385 - 902534 + | hypothetical protein TERM 1233 902544 - 902561 + F 100 -8.4 -5.35224 | CATTGATTCCCTGAA TGCCCG CTTAGT CGGGCA TTTTCTTTTTCTCAA TERM 1234 903326 - 903316 - g 72 -6.8 -4.17491 | AGCAAAGGGGTAAAA GTGG TTG CCAC CTTCCCGGAAGATTC modA 902701 - 903474 + | molybdate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1235 903861 - 903879 + G 79 -4.4 -4.97158 | opp_overlap 903858, overlap 903862 GCCGCAAGAACACTG GGTGCCGG GCG CTGGCGCG TTTTCTTTACTATCA modB 903474 - 904163 + | molybdate transporter subunit ; membrane component of ABC superfamily modC 904166 - 905224 + | molybdate transporter subunit ; ATP-binding component of ABC superfamily TERM 1236 905237 - 905217 - T 74 -9.7 -3.2964 | AAAGTGTGTCGATAA CCGCCTGAT TAA ATCAGGTGG CTATAAATGAACTGG ybhA 906043 - 905225 - | putative phosphatase TERM 1237 907154 - 907140 - g 85 -7 -4.7373 | overlap 907142 CTACTGCATGAAAAA GGCCGC TAT GCGGTC GGGCAGGGACCAATG pgl 906198 - 907193 + | 6-phosphogluconolactonase TERM 1238 907206 - 907229 + T 93 -15.3 -3.10053 | TAACCGCTGATTTAC CCGGCGCAG TCTCTT CTGCGCCGG TGTATTAACCTATCT ybhD 908250 - 907234 - | putative DNA-binding transcriptional regulator ybhH 908371 - 909423 + | hypothetical protein TERM 1239 909484 - 909462 - f 74 -10 -3.15732 | overlap 909460 909459 ACAATCAATAAAGGA CTTCTGTATG AGT CATACAGAAA GAACAGGATTTTAAA ybhI 909499 - 910932 + | putative anion transporter TERM 1240 911076 - 911099 + F 86 -13.2 -2.89055 | TCCATTTATTATCTT TCTGCGCACT TCTC GGTGCGCAGA TATCTGGAGCATTTG TERM 1241 911150 - 911136 - g 81 -7 -4.63184 | AAGTTATCTGAAAAA GGCGTG TTT CTCGCC AGTAATAACGAAATA TERM 1242 911228 - 911217 - g 100 -5.8 -5.71638 | opp_overlap 911217 GAAGAAGCAAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT ybhJ 911115 - 913376 + | putative enzyme TERM 1243 913435 - 913483 + T 75 -9.5 -3.53811 | opp_overlap 913480, overlap 913422 913425 913465 913468 GATGCGATGCTGGCG CATCTTATCCGACCTACAAATCG CAT CGAACCGTAGGCCGGATAAGGCG TTTACGCCGCATCCG ybhC 914800 - 913517 - | pectin methylesterase int 916005 - 914935 - | Integrase from phage TERM 1244 915733 - 915749 + g 79 -3.7 -5.14965 | TGTCTTCTGCTTGAT TCCTC TGCTGGC GAGGA TTTTTTCGTAGCGAT TERM 1245 916249 - 916234 - R 93 -10.4 -5.12068 | TACACGCAAGAAAAA GCCGCA TTGA TGCGGC GATGGTAGGTCTGGA yfdT 916660 - 916316 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage ECUMN_0860 917535 - 916657 - | Putative phosphoadenosine phosphosulfate reductase from phage origin TERM 1246 917215 - 917230 + g 75 -5.4 -4.61231 | overlap 917203 GAACGCGCCGCCGAT GTATGG CGTG CCGTAC TTTTTAACCATGTCC yfdR 918062 - 917526 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 1247 917981 - 918003 + g 80 -11.4 -3.41709 | opp_overlap 917979, overlap 917980 TTGAAAGGGAAACCG CGATATCGTT AAT AACGATGTCG TCTTGATTTATCTTG yfdQ 919014 - 918190 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage yfdP 919442 - 919080 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 1248 919517 - 919507 - H 70 -6.8 -4.02733 | CAAAACAGAGAAGAA CACC TGC GGTG ACTGCCGCCCGGATG TERM 1249 919626 - 919585 - g 74 -6.5 -4.56597 | gap 1, overlap 919586 919616 TCTGTTTTGTAAAAA GGACGGTACCAGCCGGAAGC AAG GGTACAAACTGGTACCG-CC AGGACTACACACAGC ECUMN_0864 919515 - 919739 + | hypothetical protein TERM 1250 920279 - 920293 + G 70 -7.2 -4.08216 | opp_overlap 920279 920278 920274 CTGGAGATCACAAAT TCATCA CTT TGATGA TTTTGACGAAAATGA ECUMN_0865 919911 - 920345 + | conserved hypothetical protein from phage origin ECUMN_0866 920538 - 920317 - | conserved hypothetical protein from phage origin TERM 1251 920584 - 920599 + r 100 -8.2 -5.84381 | opp_overlap 920584 TTGTTAAAGAGCGAA GCGTCC TATA GGGCGC TTTTTTTGTTGCTAA TERM 1252 920850 - 920835 - R 93 -10.4 -5.06414 | opp_overlap 920820, overlap 920820 GGTGGGTAATAAAAA GCCACC TTTC GGTGGC CGATGGATGGGATAT ECUMN_0867 921563 - 920871 - | putative transcriptional regulator from phage origin TERM 1253 921522 - 921536 + g 74 -10 -3.52668 | GGCGATTTTCATGTT CTTCGC TTG GCGAAG TTGTCTGACTCGGTT ECUMN_0868 921661 - 921921 + | putative lambda repressor-like DNA-binding domains ymfL 921914 - 922465 + | putative nucleic acid-binding protein; e14 prophage ymfM 922462 - 922800 + | conserved hypothetical protein; e14 prophage TERM 1254 923176 - 923134 - g 95 -12.3 -4.09685 | gap 1, overlap 923149 TCTGACCCGTCAAAA TCTGACGCATCAAAATCTGA CCCG TCAAAATTTGATGCGTC-GA AATCTGGCAAAAAAG TERM 1255 923206 - 923191 - g 81 -4.6 -5.03747 | overlap 923192 AAATCTGGCAAAAAA GCGGGT TTTC ACCCGT CAGAATCTGGCGGGG TERM 1256 923299 - 923263 - g 95 -7.1 -5.36441 | overlap 923264 CCGTCAGATAAAAAA CCTTCTCGTCCGGACGC TTC GCAACCGGACACGCAGA CGGCTGAACAGAATT TERM 1257 923298 - 923264 - g 72 -8.4 -3.81141 | overlap 923263 CGTCAGATAAAAAAC CTTCTCGTCCGGACGC TTC GCAACCGGACACGCAG ACGGCTGAACAGAAT TERM 1258 923441 - 923414 - g 85 -3.3 -5.40072 | overlap 923418 GGCTCTGGAAAAAAA TCATCGCCCTG TACGAG CAGGCCGCCGA ATGTGACGGCGAGGT ECUMN_0872 922810 - 923751 + | putative phage replication protein O TERM 1259 924190 - 924175 - gf 72 -6.8 -4.18018 | GGTGCTTACGGAAAA GCAGCA AGCG CGCTGC ATCGGGTGAAGAGTG yfdN 923748 - 924236 + | conserved hypothetical protein; CPS-53 (KpLE1) prophage ECUMN_0874 924203 - 924562 + | conserved hypothetical protein from phage origin with LexA DNA binding domain rusA 924559 - 924948 + | Crossover junction endodeoxyribonuclease TERM 1260 924943 - 924929 - gf 77 -7 -4.51097 | overlap 924930 GTAAGTACGAGAAAA CGGCGG GTG CAGCCG CCTGATCAAGAGGAG TERM 1261 925164 - 925140 - gf 74 -10.8 -2.56596 | opp_overlap 925146, overlap 925144 TTGTTCATGAATTGA CCAACACCCA GAATT TGGGTGTTGA CCCGGTGAGTGTGAT ECUMN_0876 924866 - 925777 + | conserved hypothetical protein from phage origin TERM 1262 926459 - 926479 + G 72 -4.6 -4.66537 | overlap 926462 GCTGGCGCTGAAAGT GGATCCGG AGTCG CCGGAGTC TTTTATGTTACGCCC TERM 1263 926554 - 926522 - g 75 -7 -4.4078 | gap 1, opp_overlap 926522 926521 926519, overlap 926525 CTGGGTTAATGAAAA GTACACGCGCTGGGT TAAG ACGCAGC-CGTGTGC ATGTTGTGGAAAGCC ECUMN_0877 925779 - 926774 + | hypothetical protein Q 926792 - 927148 + | antitermination protein from phage origin ECUMN_0879 928342 - 927128 - | hypothetical protein from bacteriophage origin TERM 1264 927756 - 927771 + g 70 -4.6 -4.55689 | opp_overlap 927757, overlap 927757 ATGGCTGAGCGTATA ACGAGC TTGC GCTCGC TTTTGTGTAAATCAT ECUMN_0880 929520 - 928345 - | hypothetical protein from phage origin, putative nucleoid-associated protein TERM 1265 929304 - 929323 + g 79 -3.6 -5.08824 | TCTCAATTCTGGTTA TGAATTCA GATG TGACTTCA TTTTTTAGATCCCAA TERM 1266 929641 - 929656 + G 84 -7.5 -4.64846 | opp_overlap 929641 GCCACACAGCTTAAA CCCGC CGTCGA GCGGG TTTTGTCGTTTCTGG ECUMN_0881 929542 - 929694 + | hypothetical protein from bacteriophage origin S 929812 - 930138 + | Holin r 930142 - 930618 + | Lysozyme (Lysis protein) (Muramidase) (Endolysin) TERM 1267 930745 - 930733 - gf 71 -7.7 -3.73224 | TGAGGCTGTACGAAA TGCTG AAT CAGCA ACTGCCATTACCCGT ECUMN_0884 930602 - 930994 + | putative Rz lytic protein from phage origin, putative coiled-coil ECUMN_0885 930813 - 931136 + | putative Rz1 lytic protein from bacteriophage origin TERM 1268 931136 - 931175 + T 100 -21 -3.78793 | opp_overlap 931136 931127, overlap 931147 ACGCAACTCACAGTA GCCATTACAAAGCTCATC TGCG GGTGGGCTTTGTAATGGC TTATTCGTAGTTGTC TERM 1269 931175 - 931136 - T 100 -16.6 -2.66912 | opp_overlap 931136 931147, overlap 931127 ACGCAACTCACAGTA GCCATTACAAAGCTCATC TGCG GGTGGGCTTTGTAATGGC TTATTCGTAGTTGTC ECUMN_0886 931481 - 931176 - | hypothetical protein from bacteriophage origin ECUMN_0887 931555 - 931905 + | putative endonuclease TERM 1270 932340 - 932321 - g 70 -4.3 -4.56775 | overlap 932323 ACGTGCCGTGAAAAA TATTGCC AGACAG GGCAACA CCATCACCGGTGCAA TERM 1271 932408 - 932397 - g 74 -2.2 -5.03314 | CTGACCGCCAAAAAA GAAC AGGA GTCC GAGATGAGCAGTACG ECUMN_0888 932022 - 932525 + | putative phage terminase, small subunit TERM 1272 933415 - 933398 - g 72 -5.6 -4.57073 | CAGGTGCTGGAAAAA GCCAAT CCAAAT ATTGGC GTGTCGGTTTATCGC TERM 1273 933517 - 933500 - g 77 -2.7 -5.07652 | gap 1 GTCTTTAAAACAAAA CACCTCAA TAT CTG-GGTG TCGGCGCGTTCGGCG ECUMN_0889 932522 - 934255 + | putative phage terminase ymfR 934267 - 934449 + | conserved hypothetical protein; e14 prophage ECUMN_0891 934449 - 935690 + | putative phage portal protein TERM 1274 936001 - 935982 - gf 100 -13.6 -3.33261 | opp_overlap 935982 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG TERM 1275 935982 - 936001 + GF 100 -13.6 -4.21607 | opp_overlap 935982 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG TERM 1276 936213 - 936179 - gf 100 -2.7 -5.80817 | overlap 936180 936185 CCGAACAGAAAAAAA TCGAAAGAGTCCTGC GTGAT GTCGGACTCTCCCGT ACCCAGGCCAAAGCA ECUMN_0892 935632 - 936318 + | putative phage pro-head protease TERM 1277 936455 - 936444 - g 81 -5.8 -4.77438 | overlap 936450 ATTGAGCAGGAAAAA GGCA AACT TGCC GGGCAGGTGGAAACC ECUMN_0893 936333 - 937538 + | putative major capsid protein TERM 1278 937569 - 937542 - f 82 -12.6 -2.71364 | opp_overlap 937544 GCAGCGGCGTAATCA CTCAGGGGCGCG GAAC CGCGCCCCTGTT CTGACGGGTGAAGAA TERM 1279 937544 - 937567 + F 100 -19.6 -3.30124 | opp_overlap 937542 AGCGGCGTAATCACT CAGGGGCGCG GAAC CGCGCCCCTG TTCTGACGGGTGAAG ECUMN_0894 937587 - 937787 + | hypothetical protein ECUMN_0895 937790 - 938113 + | hypothetical protein ECUMN_0896 938110 - 938520 + | putative phage head-tail adaptor TERM 1280 938554 - 938572 + G 78 -9.5 -3.89614 | GATGCGCTTTAACCG CGCCCGT GTCCG GCGGGCG TTTGTCACGATTGGG ECUMN_0897 938495 - 939001 + | hypothetical protein TERM 1281 939178 - 939161 - g 84 -4.1 -5.18371 | CGGGAGAAAACAAAA GCCAG ACCGACTA CTGGC AGGAGCTGAAAGAGG ECUMN_0898 938998 - 939558 + | hypothetical protein ECUMN_0899 939567 - 939737 + | hypothetical protein TERM 1282 940534 - 940554 + G 74 -9.7 -3.53012 | opp_overlap 940534 GGCACGCTGTCAGAA CTGGTGACC GCA GGTGACCAG TTTAACCAGCAGCAC TERM 1283 940554 - 940534 - g 72 -9.7 -3.29511 | opp_overlap 940534 GGCACGCTGTCAGAA CTGGTGACC GCA GGTGACCAG TTTAACCAGCAGCAC ECUMN_0900 939721 - 941217 + | Tail sheath protein ECUMN_0901 941217 - 941573 + | putative phage tail protein ECUMN_0902 941570 - 941893 + | conserved hypothetical protein from bacteriophage origin TERM 1284 942183 - 942152 - g 70 -6.6 -4.08216 | GCACTCCCTGTAAAA TCAGCCATCACC CTTGAATC GAAGATGGCTGA TGTCCGCAAAGTGGT TERM 1285 942699 - 942679 - g 78 -10.5 -3.54424 | overlap 942692 942693 CCTGACCGCGGGAAA TTCTGCGAC AAA ATCGCAGAA ACAGGCATTGCGTTT TERM 1286 942772 - 942758 - g 72 -7.8 -3.95073 | opp_overlap 942752, overlap 942761 GCTGATATGCAGAAA GATGCC CGG GGCACC ATGCTGTCTGTACTG TERM 1287 943639 - 943656 + G 91 -2.7 -5.55664 | gap 1 TAAAGGGCTGTTTCT GGC-TTCA GAC TGGACGCC TTTTTTTGATCGTAA TERM 1288 943855 - 943866 + G 81 -7.2 -4.67038 | opp_overlap 943845 AATCACGCACGATGT GGGG TATT CCCC TTTTCGTTTTCCACG ECUMN_0903 941978 - 943885 + | putative phage tail tape measure protein ECUMN_0904 943910 - 945286 + | Tail/DNA circulation protein ECUMN_0905 945283 - 946362 + | Tail protein ECUMN_0906 946362 - 946910 + | putative baseplate assembly phage protein ECUMN_0907 946907 - 947335 + | putative tail protein TERM 1289 947449 - 947471 + G 70 -10.6 -2.74461 | opp_overlap 947448, overlap 947448 ACGTGCGGGCAAAGG TGTATGCGGC GGC GCTGCATACG GTTTACGGGTACATC ECUMN_0908 947322 - 948380 + | putative baseplate J-like phage protein ymfQ 948371 - 948955 + | conserved hypothetical protein; e14 prophage TERM 1290 949007 - 948981 - g 86 -9.4 -4.41353 | overlap 948973 GTATAGACACGAAAA CCGCGCAGAA GGATAAG TTCGGCGCGG GTAAGAACGGTTTTA ECUMN_0910 948959 - 949891 + | conserved hypothetical protein; putative carbohydrate kinase; bacteriophage origin ECUMN_0911 949892 - 950296 + | Hypothetical protein; putative phage tail fiber assembly protein TERM 1291 950299 - 950338 + T 77 -11.5 -2.79796 | gap 1, opp_overlap 950302 GCGGGCCAGTTGATA TCAGGCGCAGGGGCAGCA TCAAC TGCTGTCACTGCGTC-GA TGTAGTCGAGTACCG TERM 1292 950595 - 950557 - T 95 -14.1 -3.19449 | overlap 950548 950546 950558 950561 CAAATACTTGATTAA TTTATGGCGCATCAATA TAAAG TATCGATGCGCCATAAT AATCACTGACAAATG TERM 1293 950594 - 950558 - T 100 -17.6 -2.51187 | overlap 950557 950548 950546 950561 AAATACTTGATTAAT TTATGGCGCATCAATA TAAAG TATCGATGCGCCATAA TAATCACTGACAAAT TERM 1294 950591 - 950561 - T 89 -14.9 -2.56914 | overlap 950558 950557 950548 950546 TACTTGATTAATTTA TGGCGCATCAATA TAAAG TATCGATGCGCCA TAATAATCACTGACA ECUMN_0912 952085 - 950598 - | hypothetical protein; putative membrane protein TERM 1295 950639 - 950671 + g 70 -4.3 -4.49756 | opp_overlap 950638 950641, overlap 950641 950642 950644 CAACTACAATAATAT CATCATATGAGTATA AGT TATATTCATATGCTC TTTTAATCTTTGCGG yfdH 953001 - 952072 - | bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage yfdG 953360 - 952998 - | bactoprenol-linked glucose translocase (flippase) ; CPS-53 (KpLE1) prophage TERM 1296 953557 - 953523 - R 100 -10.1 -5.31275 | opp_overlap 953523 TTTGATGACAAAAAA TTAGCGCAAGAGGAC AAAAA ATCACCTTGCGCTAA TGCTCTGTCTCAGGT TERM 1297 953802 - 953776 - R 86 -13.8 -2.53759 | opp_overlap 953773, overlap 953781 953783 AATACCTTTAAGTGA TACCAGATGGCA TAG CGCCATCTGGCA GAGTGATTAACTAAA ybhB 954285 - 953809 - | putative UPF0098 class protein bioA 955633 - 954344 - | 7,8-diaminopelargonic acid synthase, PLP-dependent TERM 1298 954659 - 954671 + g 76 -9.1 -3.72576 | opp_overlap 954658 954659 GCCAGATTCGAGAAT CGCCA GGC TGGCG TTTGCTGCCGCGCAG bioB 955720 - 956760 + | biotin synthase TERM 1299 956800 - 956780 - g 76 -9.6 -3.77302 | overlap 956776 GCAGGAGAAAATCAA CGCGGCGC TCGAT GCGCGGCG TGCTGCCGATGCCCT TERM 1300 957187 - 957202 + G 74 -7.5 -4.11216 | CTGCCAGTTTAAGCC CGGCG CAGCTT CGCCG TTTTACCCATAACGA bioF 956757 - 957911 + | 8-amino-7-oxononanoate synthase bioC 957898 - 958653 + | putative methltransferase, enzyme of biotin synthesis bioD 958646 - 959323 + | dethiobiotin synthetase TERM 1301 960661 - 960641 - g 70 -6.7 -4.14739 | CCATCTACCCGAAAA CGCACTACG TCA CGCCGCGCG AGCGCATCGTACAGG TERM 1302 960710 - 960700 - g 70 -6.8 -4.1421 | GAGATCAAAGAAGAA CTGG CCG CCAG ACGCAAAGTGCTGTT TERM 1303 960753 - 960739 - g 72 -5.7 -4.51812 | overlap 960741 TTGGAGAATAACAAA CTGCT GGAAG AGCAG CGGCTGACCCAGCGT uvrB 959902 - 961923 + | excinulease of nucleotide excision repair, DNA damage recognition component TERM 1304 961954 - 961936 - T 75 -4.5 -4.90906 | overlap 961937 TGACAAGATGAAAAA GCCGGAA TGTTC TTCCGGT TCAGATTAACGATCA ybhK 962978 - 962070 - | putative transferase with NAD(P)-binding Rossmann-fold domain; UPF0052 family ECUMN_0923 963376 - 963221 - | hypothetical protein moaA 963375 - 964364 + | molybdopterin biosynthesis protein A moaB 964386 - 964898 + | molybdopterin biosynthesis protein B TERM 1305 964987 - 964971 - g 76 -9.4 -3.71649 | opp_overlap 964966, overlap 964964 CCGCCAAAGCGGAAA CCGTGC GTGAA GCACGG GCGGAAGCCTTTGTC moaC 964901 - 965386 + | molybdopterin biosynthesis, protein C moaD 965379 - 965624 + | molybdopterin synthase, small subunit moaE 965626 - 966078 + | molybdopterin synthase, large subunit ybhL 966215 - 966919 + | conserved hypothetical protein; putative inner membrane protein TERM 1306 966939 - 966957 + F 100 -8.1 -5.84381 | opp_overlap 966939 966937 TTTTCACCATCAATA TCCCGGC CATGT GTCGGGA TTTTTTTCTTACTAA ECUMN_0931 967124 - 967513 + | hypothetical protein ybhN 968505 - 967549 - | conserved hypothetical protein; putative inner membrane protein TERM 1307 968254 - 968268 + g 90 -11.4 -3.86015 | opp_overlap 968244 968242 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA ybhO 969746 - 968505 - | cardiolipin synthase 2 ybhP 970504 - 969743 - | putative metal-dependent hydrolase TERM 1308 969796 - 969833 + g 77 -6.2 -4.62783 | gap 1, overlap 969799 969799 AAAGGTGTCGCCATG TCCGCAGCGGCAACGCG GTTGG CGCGCTGGCGCTG-GCA TTTTTGACATAGATC TERM 1309 970942 - 970984 + G 71 -9 -3.44848 | overlap 970942 970944 970947 AAACAACTTTTTGCT GGCGATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTGGTG TCTTTGCTGGCGAAA TERM 1310 970944 - 970982 + G 95 -13.8 -3.29704 | overlap 970942 970942 970947 ACAACTTTTTGCTGG CGATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTGG TGTCTTTGCTGGCGA TERM 1311 970947 - 970979 + G 85 -14.1 -2.82279 | overlap 970944 970942 970942 ACTTTTTGCTGGCGA TTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGG TGGTGTCTTTGCTGG ybhQ 970637 - 971047 + | conserved hypothetical protein; putative inner membrane protein ybhR 972115 - 971009 - | putative transporter subunit: permease component of ABC superfamily TERM 1312 971941 - 971975 + g 70 -10 -3.21912 | GCTCCACCGAATGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTAGTCACTTCCAGC ybhS 973259 - 972126 - | putative transporter subunit: permease component of ABC superfamily TERM 1313 972386 - 972361 - G 72 -6.2 -4.40358 | gap 2, overlap 972351 972348 ATCGACGGCAGAAAA GCCGCGTTCAGG GCGA CCTGA--GCGGC ATTGAACTGGTTGCG ybhF 974988 - 973252 - | putative transporter fused subunits of ABC superfamily: ATP-binding components TERM 1314 973564 - 973590 + g 74 -10.1 -3.56092 | gap 1 GTCCGGTTCATGCAT CAGCGAGCAGGC CAGT GCCAGC-CGCTG TTTAAAACCTAATGG TERM 1315 974746 - 974767 + g 93 -8.7 -4.88407 | gap 1, opp_overlap 974740, overlap 974746 974748 CGGCATATAGCCGAG C-ACGGCGTG CAG CGCGCCGTCG TTTTTGATTGGATCA TERM 1316 974748 - 974764 + g 80 -11.5 -3.32518 | opp_overlap 974740, overlap 974746 974746 GCATATAGCCGAGCA CGGCGTG CAG CGCGCCG TCGTTTTTGATTGGA ybhG 975979 - 974981 - | putative membrane fusion protein (MFP) component of efflux pump, membrane anchor; UPF0194 family TERM 1317 975097 - 975111 + g 70 -7 -4.1196 | opp_overlap 975082, overlap 975090 975082 GGTCGGTACGCAGAT CCGGCG TTT CGACGG TTTTCGGGGTAAATT TERM 1318 975500 - 975530 + g 81 -9.6 -4.13304 | TGCCGATTTCAGCGT TGCCTGCGCCTGGT CGC GCGAGGAGCGGGCA TTTTCCAGGTCATTT ybiH 976650 - 975979 - | putative DNA-binding transcriptional regulator TERM 1319 976593 - 976605 + g 81 -4.8 -5.09173 | opp_overlap 976579 976580 ACTGCGCCAGTGCGG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 1320 976663 - 976686 + H 74 -9.8 -3.37354 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCCATATG rhlE 976879 - 978243 + | RNA helicase TERM 1321 978365 - 978396 + T 77 -10 -3.53012 | opp_overlap 978375, overlap 978366 TTGCATGCTTTTGTA GGCCGGATAAGGCG TTTG CGCCGCATCCGGCA TTTCACAACAAGCAC TERM 1322 978366 - 978395 + T 86 -13.5 -2.71712 | opp_overlap 978375, overlap 978365 TGCATGCTTTTGTAG GCCGGATAAGGCG TTTG CGCCGCATCCGGC ATTTCACAACAAGCA ybiA 978961 - 978479 - | hypothetical protein TERM 1323 978654 - 978664 + g 77 -8.2 -4.14243 | opp_overlap 978654, overlap 978656 TGTTGTTCGAATTTA GCGC GAA GCGC TTTTCGCATCACCTG TERM 1324 979336 - 979313 - g 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT GAGT ACCGCCAACG TGGCGTTGCAGGATC dinG 979081 - 981231 + | ATP-dependent DNA helicase TERM 1325 981214 - 981227 + F 72 -9.5 -3.25223 | opp_overlap 981210 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 1326 981287 - 981314 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 981285 981283 981287 981306 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC ybiB 981259 - 982221 + | putative transferase/phosphorylase TERM 1327 982233 - 982256 + F 100 -12.5 -4.07885 | TTAATTTTTATCTCA GCCGGATGA GCCACG TCATCCGGC TTTTACCCCACCGTA ybiC 982362 - 983447 + | putative hydroxyacid dehydrogenase TERM 1328 983475 - 983454 - T 100 -13.7 -5.81412 | GCCAGCTAAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT TERM 1329 983611 - 983659 + T 83 -11.6 -3.37796 | opp_overlap 983609 983611 983612, overlap 983599 983612 GTAGGTCTGATAAGA CGCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 1330 983658 - 983612 - T 74 -10.7 -2.5294 | opp_overlap 983599 983611 983612, overlap 983609 983611 TAGGTCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG TERM 1331 983612 - 983658 + T 89 -15.1 -2.62463 | opp_overlap 983609 983612 983611, overlap 983599 983611 TAGGTCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG ybiJ 983936 - 983676 - | hypothetical protein TERM 1332 983809 - 983827 + g 71 -3.1 -4.79657 | overlap 983795 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 1333 983986 - 984001 + r 83 -4 -5.40072 | overlap 983987 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTACGAGAGA ybiI 984467 - 984201 - | hypothetical protein ybiX 985218 - 984541 - | conserved hypothetical protein with PKHD hydroxylase domain TERM 1334 984610 - 984620 + g 77 -8.2 -4.08767 | overlap 984608 GATCTCTTCACTTTC GCCG TAG CGGC TTTTCAGCGACTGAA TERM 1335 985252 - 985235 - R 100 -12.7 -4.58283 | CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ATCTGAATCAGAAAT fiu 987542 - 985260 - | putative TonB-dependent iron outer membrane transporter TERM 1336 985827 - 985847 + g 79 -3.9 -5.04325 | AACCTGCCATTTGGT GCCAATCTC GCT GGTGTTGGC TTTTTGTGGTTTAAA TERM 1337 986869 - 986884 + g 71 -2.4 -5.02074 | TTTTTGATTTTGTCG CGTCCG GCAT CGTGCG TTTTTTCGCCCATCA TERM 1338 987201 - 987191 - G 70 -6.8 -4.0371 | CACCGCGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 1339 987252 - 987234 - G 81 -4.4 -5.03314 | opp_overlap 987242, overlap 987238 CTCACCCGCAAAAAA CGCACCCA CGC CGGGGACG TTTTTGAGCGCGTCG TERM 1340 987637 - 987682 + r 76 -6.4 -4.52857 | gap 1 ATCTCGTGATAGCGT TCGTG-CAAGTGATAATAATT TTGAT AAGCATTATCACTTGGCGCGA TTTTCTATCACCCAT TERM 1341 987792 - 987771 - R 74 -7.3 -4.23434 | opp_overlap 987771 CAAAACAGGCGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT ybiM 988211 - 987807 - | hypothetical protein TERM 1342 987875 - 987893 + g 71 -3 -4.86033 | overlap 987876 TAATGACATAACCTT TCGCGC CTTGCTC GCGCGC TTTTTCTGCCAGTTT TERM 1343 988049 - 988059 + g 71 -3.2 -4.77036 | CGGTGGCAATCAGTA GTGT GAG GCAC TTTTTCATAATGACA ybiN 988343 - 989269 + | putative AdoMet-dependent methyltransferase ybiO 991491 - 989266 - | hypothetical protein TERM 1344 989824 - 989794 - G 72 -6.8 -4.29326 | opp_overlap 989796, overlap 989796 TTCAAACTGAATAAA TACGCCGGTGATAA TAT CTTTCACCAGCGTT TGCGAACCAAAAGAG TERM 1345 989822 - 989796 - G 76 -9.4 -3.74101 | opp_overlap 989796, overlap 989794 CAAACTGAATAAATA CGCCGGTGATAA TAT CTTTCACCAGCG TTTGCGAACCAAAAG TERM 1346 991340 - 991353 + g 100 -4.5 -6.11243 | gap 1, overlap 991332 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTTGTTCGAT glnQ 992474 - 991752 - | glutamine transporter subunit ; ATP-binding component of ABC superfamily glnP 993130 - 992471 - | glutamine transporter subunit ; membrane component of ABC superfamily glnH 994015 - 993269 - | glutamine transporter subunit ; periplasmic binding component of ABC superfamily TERM 1347 993730 - 993767 + g 74 -3.4 -4.99134 | gap 1 TCGCTTTTTTACGCT CGTCGGTAATGGTGATG CCCGC CAGCGCCAG-ATCGACG TTTTTGGTTTGCAGT TERM 1348 994134 - 994124 - R 77 -6.8 -4.59109 | opp_overlap 994124 994123 GAGATGCGGTAAAAA CGTG ATG CACG ATTTATAGGGCAATA TERM 1349 994262 - 994243 - R 74 -3.6 -5.16237 | opp_overlap 994243 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATGTGGAT TERM 1350 994356 - 994378 + r 77 -7.6 -4.40804 | opp_overlap 994357, overlap 994357 GGGCTGCAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGGGTACTA TERM 1351 994357 - 994377 + r 78 -11.1 -3.24 | opp_overlap 994357, overlap 994356 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT TERM 1352 994377 - 994357 - R 100 -13.3 -5.07652 | opp_overlap 994356 994357 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT dps 994922 - 994419 - | Fe-binding and storage protein TERM 1353 994826 - 994841 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTGTC TERM 1354 995180 - 995215 + r 74 -10.6 -2.71693 | opp_overlap 995183, overlap 995177 AGGAAAAGTAGCGAG AAATTCTGCATGGTTA TGCA TAACCATGCAGAAATG TAAATTTAATTAATG TERM 1355 995212 - 995183 - R 100 -16.7 -3.96827 | opp_overlap 995180 995177 AAAAGTAGCGAGAAA TTCTGCATGGTTA TGCA TAACCATGCAGAA ATGTAAATTTAATTA rhtA 996108 - 995221 - | threonine and homoserine efflux system TERM 1356 995658 - 995636 - G 73 -9 -3.69373 | opp_overlap 995652 TAAATAGCCCAACAA GCCCCGGCCC CCA GAGCCAGCGC ACAGCCGGTTAAATC TERM 1357 995901 - 995887 - G 93 -11.4 -4.18164 | opp_overlap 995886 995884 995887 995889, overlap 995874 AACGCCGTAAAACAA CAGCGG TAA CCGCTG CTCTTTGGCAAAGCG TERM 1358 995887 - 995901 + g 73 -11.4 -2.60496 | opp_overlap 995874 995887, overlap 995886 995884 995889 AACGCCGTAAAACAA CAGCGG TAA CCGCTG CTCTTTGGCAAAGCG TERM 1359 996300 - 996284 - H 79 -9.5 -3.72315 | opp_overlap 996284 996283, overlap 996282 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 996461 - 996976 + | outer membrane protein TERM 1360 996992 - 997021 + T 91 -10.1 -4.70879 | opp_overlap 996998, overlap 996998 TCACTTCGGTGATAT AAAAAATCCGCCT CTCG GGGCGGATTTTTG TTTTTAAGGTTTCGG TERM 1361 997015 - 996998 - T 100 -8.4 -5.36441 | opp_overlap 996998 996992 CGGTGATATAAAAAA TCCGCC TCTCGG GGCGGA TTTTTGTTTTTAAGG TERM 1362 996998 - 997015 + T 100 -9.1 -5.61881 | opp_overlap 996998, overlap 996992 CGGTGATATAAAAAA TCCGCCT CTCG GGGCGGA TTTTTGTTTTTAAGG ybiP 998608 - 997025 - | putative enzyme, UPF0141 family, inner membrane TERM 1363 997424 - 997449 + g 70 -4.7 -4.50159 | TAAATCGTCTGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTCGATTGCA TERM 1364 998579 - 998564 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGATTCTTTG TERM 1365 998859 - 998882 + H 72 -8.1 -3.8709 | opp_overlap 998861, overlap 998861 ATAAAAGCAGGAGTG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCGGAAGGTTT TERM 1366 998880 - 998861 - H 76 -10.7 -3.12803 | opp_overlap 998859 998861 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT TERM 1367 998861 - 998880 + H 81 -10.7 -3.52113 | opp_overlap 998861, overlap 998859 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT ECUMN_0960 999459 - 1000040 + | hypothetical protein int 1001116 - 1000061 - | Integrase from bacteriophage origin TERM 1368 1000331 - 1000351 + g 76 -4 -4.88918 | gap 1, overlap 1000331 GAAAGCGTTATAGCA GG-GCTTTG GAAA CAGAGCGCC TTTTGTTTCGGGTAG TERM 1369 1000738 - 1000767 + g 70 -3.5 -4.59109 | gap 1 AAACCTTAGAAACAC GGTTAGTACGGGCA TAA TGCCCTT-CAAGCC TTTTTGCACGGTATG TERM 1370 1000851 - 1000862 + g 77 -5.8 -4.67234 | GCCGCCCAGGTCATT GCGT CTTT ACGC TTTTTACCATTGCGT cI 1001699 - 1001118 - | Repressor protein from bacteriophage origin TERM 1371 1001726 - 1001714 - H 72 -7.7 -3.99898 | opp_overlap 1001713 1001714, overlap 1001702 TAACGAATCCATAAA TCTCG ATT CGAGA AATTGTGATTGACAC TERM 1372 1002005 - 1001982 - g 75 -4.4 -4.78077 | GGTAAGCAAAAGAAA GGCCTGGTCG AAGT CAACATGGCC GCGCTTACCATTCAG ECUMN_0963 1001835 - 1002056 + | putative regulator from bacteriophage origin cII 1002087 - 1002590 + | Regulatory protein from bacteriophage origin ECUMN_0965 1002600 - 1002773 + | hypothetical protein from bacteriophage origin TERM 1373 1003070 - 1003086 + G 71 -3 -4.84359 | ATGAACGGATTCGGG TCATTG CGTGA CAGTGA TTTTTCTAAAAGTAC ECUMN_0966 1002782 - 1003210 + | hypothetical protein from bacteriophage origin TERM 1374 1003457 - 1003474 + G 74 -6.3 -4.52589 | gap 1, opp_overlap 1003441 1003457 CGCAAATTGAAGCAA TTGC-CGG AAT CCGCGCAA TTTTCTATACGGCCG ECUMN_0967 1003210 - 1003611 + | hypothetical protein from bacteriophage origin TERM 1375 1003725 - 1003715 - g 75 -5.4 -4.64676 | overlap 1003716 TTACCCGCAACAAAA TCAG GCA CTGA CCTGCTGGCTATGCT ECUMN_0968 1003679 - 1003912 + | conserved hypothetical protein from bacteriophage origin TERM 1376 1004507 - 1004525 + G 90 -8 -4.85599 | ATACCGACAATTTCA CCGCGTAC CAT GAGCGCGG TTTTTCTCACATGGA ECUMN_0969 1003903 - 1004772 + | Site-specific DNA-methyltransferase (adenine-specific) from bacteriophage origin ECUMN_0970 1004769 - 1004981 + | hypothetical protein from bacteriophage origin; putative membrane protein TERM 1377 1005078 - 1005100 + GF 79 -12 -2.6176 | overlap 1005077 GATCACCGAACGCCG CCTGTGGGCT GTT AACCCACAGG ATTATGAATGGCGTT TERM 1378 1005155 - 1005134 - gf 74 -10.9 -2.79302 | opp_overlap 1005134, overlap 1005136 AGTACCTGCATGAGA TACCCGACT GGTT AGCCGGGTA TTTCGGCAACCGTTA TERM 1379 1005134 - 1005155 + GF 71 -8.7 -3.53761 | opp_overlap 1005134 1005136 AGTACCTGCATGAGA TACCCGACT GGTT AGCCGGGTA TTTCGGCAACCGTTA TERM 1380 1005929 - 1005942 + GF 71 -9.5 -3.06796 | opp_overlap 1005901 1005926 AGTTTTACACCATCA CCGCG CCAT CGCGG TTCCATGCGGTACAC TERM 1381 1006404 - 1006419 + GF 77 -10.4 -3.55801 | TGCATGGGCTTCACG CTGGCG CATT CGCCAG TTTCAGCAGATTGGT TERM 1382 1006744 - 1006757 + GF 73 -3.7 -4.82901 | overlap 1006742 AAGTTGGCCGAAGCG CCAGC GGAG GCGGG TTTTTCTGGCGGCAA A 1004947 - 1006998 + | Replication gene A protein from bacteriophage origin TERM 1383 1007293 - 1007279 - g 93 -8.5 -4.8066 | opp_overlap 1007278 1007279 AACAGAAGCTAAAAA CCCCC AGGAA GGGGG CTTATCAGGCGGCGG ECUMN_0972 1007118 - 1007324 + | hypothetical protein ECUMN_0973 1007621 - 1007298 - | conserved hypothetical protein from bacteriophage origin TERM 1384 1007493 - 1007505 + g 77 -6.2 -4.65933 | opp_overlap 1007483, overlap 1007483 AATATCCGCAATCTG CCGG TGCTT CCGG TTTGTTTTACGAATA Q 1008679 - 1007618 - | putative portal vertex protein from bacteriophage origin TERM 1385 1008335 - 1008345 + g 70 -6.8 -4.11216 | overlap 1008336 AATTACATCCCCCCA TCCG TTG CGGA TTTTGCCAATCGCAA TERM 1386 1008650 - 1008665 + g 100 -3.2 -5.88471 | overlap 1008651 ATCGCCGCGCGGGTT GCGCTT AACG AAGCGG TTTTTTTTACTCATG TERM 1387 1008651 - 1008664 + g 70 -6.7 -4.11456 | overlap 1008650 TCGCCGCGCGGGTTG CGCTT AACG AAGCG GTTTTTTTTACTCAT P 1010451 - 1008676 - | Putative Terminase, ATPase subunit from bacteriophage origin TERM 1388 1008927 - 1008940 + g 91 -3.1 -5.49569 | CCACGTCCGCCGCTT TCAGT ACCA GCTGA TTTTTTGTGTTCATG TERM 1389 1009514 - 1009527 + g 79 -3.7 -5.15634 | overlap 1009515 TCAAAGGACGGGAAC CGGGC GGCC GCGCG TTTTTTGCTGCCCTG TERM 1390 1010136 - 1010152 + g 74 -2.1 -5.04733 | overlap 1010138 CTGCCTGACCGTTAC TCTGGCC GCT GGCCATC TTTTCTTTATGCTTA TERM 1391 1010138 - 1010150 + g 81 -9.1 -4.12652 | overlap 1010136 GCCTGACCGTTACTC TGGCC GCT GGCCA TCTTTTCTTTATGCT TERM 1392 1010330 - 1010300 - G 70 -7.1 -4.11216 | opp_overlap 1010310 TCTGTACTTTCAAAA CTGAGTAAAT-CAGC CCA GCTGTATTT-CTCAG CCCAGTAGTAAACGA TERM 1393 1011343 - 1011325 - g 71 -9 -3.45395 | overlap 1011323 1011321 ATAATGCAAAAGATA TCGTTAAA CGT TTTAACGA TCTGGGTAATAAATC ECUMN_0976 1010613 - 1011416 + | Putative capsid scaffolding protein from bacteriophage origin ECUMN_0977 1011478 - 1012500 + | Putative major capsid protein precursor from phage origin ECUMN_0978 1012504 - 1013205 + | putative terminase, endonuclease subunit from bacteriophage origin TERM 1394 1013682 - 1013672 - g 72 -8.2 -3.74626 | opp_overlap 1013672 AGGAAAGTATGGAAA CCCG CGC CGGG TTACTGGCTGAGGCT ECUMN_0979 1013251 - 1013754 + | putative Head completion/stabilization protein (GpL) from bacteriophage origin TERM 1395 1014149 - 1014137 - g 72 -6.2 -4.3129 | CAGGGAGGACGAAAA CGGG GCGAT CCCG TGGCAGGGGAAACGC ECUMN_0980 1013751 - 1014257 + | conserved hypothetical protein from bacteriophage origin; putative Acyl-CoA synthetases/AMP-acid ligases II TERM 1396 1014299 - 1014283 - g 74 -2.2 -5.08601 | TGAGCTGAATAAAAA GCAGCT TGCAG AGTTGC GTAAATCACTGGCCA TERM 1397 1014673 - 1014663 - g 77 -6.8 -4.58395 | overlap 1014664 TGGAGGCCGGAAAAA TGGC CAC GCCA GCCCAGGCCAAAAAA TERM 1398 1014748 - 1014736 - g 91 -9.1 -4.60924 | TAAACGCTGGAAAAA GCCCA CGC TGGGC GAGTTAACCAAAACG ECUMN_0981 1014254 - 1014961 + | conserved hypothetical protein from bacteriophage origin TERM 1399 1015645 - 1015662 + G 72 -8.4 -3.83502 | CTGGCCACGCTTCAG GCGCTG GAAGCA CAGCGC TTTAGTGTACCGATG ECUMN_0982 1014958 - 1016085 + | Putative tail sheath protein from bacteriophage origin TERM 1400 1016315 - 1016326 + G 79 -2.2 -5.23292 | overlap 1016303 TTCGTGGCGTGGTAT TCCG CCGC TGGA TTTTCTTTTCTATGC ECUMN_0983 1016082 - 1016537 + | Putative tail tube protein from bacteriophage origin ECUMN_0984 1016548 - 1016850 + | Holin from bacteriophage origin ECUMN_0985 1016837 - 1017178 + | conserved hypothetical protein from bacteriophage origin ECUMN_0986 1017178 - 1017558 + | conserved hypothetical protein from bacteriophage origin ECUMN_0987 1017654 - 1017920 + | conserved hypothetical protein from bacteriophage origin TERM 1401 1018518 - 1018536 + G 81 -10.2 -3.86015 | opp_overlap 1018513 1018517 TGCGCTCAAATCCAC CGCAGCGG AAA CCGCTGAG TTTATGGGGCAGATG ECUMN_0988 1018108 - 1020168 + | putative tail tape measure protein from bacteriophage origin ECUMN_0989 1020165 - 1020494 + | conserved hypothetical protein from bacteriophage origin TERM 1402 1021273 - 1021291 + G 72 -8 -3.92373 | TTTATTGTTGGATAG CGGGGTGG CTT CCGCGCCG TTTGTGAATGCGGTG ECUMN_0990 1020491 - 1021675 + | conserved hypothetical protein from bacteriophage origin ECUMN_0991 1021662 - 1022255 + | conserved hypothetical protein from bacteriophage origin TERM 1403 1022568 - 1022550 - gf 78 -10.2 -3.61398 | opp_overlap 1022549 1022546 TGGTCTGCTGAATAA GGCCAGCG GCA CCCTGGCC ATGATTGTTCATGCG TERM 1404 1022609 - 1022598 - gf 70 -5.8 -4.25104 | GCCTGTGCAGCAAAA GCTG AAAA CAGC GGAAGGGCAGCAGGG TERM 1405 1023655 - 1023680 + GF 78 -7.5 -4.42386 | GGTGCCGGAGGTTTT GGTTCGCAACT TGGA AGTGGCGCACC TTTTATCAGTCCGCG ECUMN_0992 1022266 - 1024314 + | Conserved hypothetical protein from bacteriophage origin; modular protein TERM 1406 1024339 - 1024355 + GF 74 -2.9 -4.88067 | AGCAATATTACTACA GCTATTC GGC GAAGGGC TTTTTCTGGCTGAGT TERM 1407 1024431 - 1024392 - gf 81 -8.6 -4.29845 | gap 1, overlap 1024385 GAACTTAAGGGAAAA GATATTCC-CGCTGACCTG ATA CCCGTCAGCGAGGAAGATC ACGCCGCACTGTTCC ECUMN_0993 1024281 - 1024733 + | putative tail fiber assembly protein from bacteriophage origin ECUMN_0994 1024723 - 1025448 + | conserved hypothetical protein from bacteriophage origin TERM 1408 1025857 - 1025838 - gf 70 -6.4 -4.28254 | GGGCAACAGGTAAAA CGTCTGCC AAAA AACAGACG GCCGGTAATGCGGGA TERM 1409 1025945 - 1025930 - gf 76 -6.1 -4.56775 | opp_overlap 1025944 ACGTGGTTTGAAAAA CGGGT GCTGAA ACCCG TCAATGATGCTTTGG ECUMN_0995 1025420 - 1025965 + | conserved hypothetical protein from bacteriophage origin ECUMN_0996 1025965 - 1027668 + | conserved hypothetical protein from bacteriophage origin TERM 1410 1027681 - 1027697 + T 100 -7.2 -5.61596 | TGATCATCCCATTAG CCCGCG CGTAA TGCGGG TTTTTTTGTACCCAT TERM 1411 1027861 - 1027849 - T 72 -3.3 -4.96848 | opp_overlap 1027859, overlap 1027859 TTTCGCAGACAAAAA CGGCA CTA CACCG CACCCGCCTGCGGTT TERM 1412 1028145 - 1028119 - T 70 -6.4 -4.27117 | TTCTGAGAACATAAA GCCCGTGAAGAT AGG AACTACGCGGGC TGTACATACTTTGTG ECUMN_0997 1028437 - 1028213 - | hypothetical protein from bacteriophage origin ECUMN_0998 1029014 - 1028376 - | hypothetical protein from bacteriophage origin; putative membrane protein TERM 1413 1029051 - 1029030 - R 85 -11.7 -3.30513 | overlap 1029025 GAAATAAATATTTAA GCCGAATTA ATTA TAATTCGGC AATTAAAATTAGAAA ECUMN_0999 1029323 - 1029060 - | hypothetical protein from bacteriophage origin ECUMN_1000 1029960 - 1029361 - | hypothetical protein TERM 1414 1029812 - 1029825 + g 82 -3.1 -5.23016 | GGGCAGGTCTTTGCA GAGGT TGAT ACTTC TTTTTTGCATTCTTT mntR 1030164 - 1030631 + | DNA-binding transcriptional regulator of mntH TERM 1415 1030889 - 1030901 + G 70 -6.9 -4.04319 | overlap 1030883 ATGTTTATGGTGCTG GCGGC GGC GCTGC TTTCTACCTTTCTGA ybiR 1030628 - 1031746 + | putative transporter TERM 1416 1031783 - 1031765 - T 100 -7.4 -5.63517 | opp_overlap 1031763 1031761 1031765 CTGGCAAATAAAAAA GGCGGA TGATGAG TCCGCC TCTGTTTTACGTTTT ybiS 1032724 - 1031804 - | hypothetical protein TERM 1417 1033735 - 1033720 - g 70 -4.6 -4.4634 | opp_overlap 1033725, overlap 1033722 AACGCCAAGAAGAAA GCGCAG ATTG CTGAGC TGCAATCTTTCGTTA ybiT 1032943 - 1034538 + | putative transporter fused subunits of ABC superfamily: ATP-binding components ECUMN_1005 1037093 - 1034718 - | putative glucosidase TERM 1418 1037026 - 1037008 - G 71 -11 -2.87026 | TACAGGCACAGGATA TGCTGGCC ATC GACCAGCA GTTCAACGTGGTGGG ECUMN_1006 1038403 - 1037096 - | Putative hexuronate transporter TERM 1419 1037959 - 1037931 - G 72 -4.6 -4.67353 | opp_overlap 1037935, overlap 1037935 GCACCGATGGAAAAA CCGA-CGCCTGC CCAGCCT GC-GGCGATCGG GCGTTCTGATTTTGG TERM 1420 1038052 - 1038041 - G 70 -7.2 -4.06687 | ACCGCCCATAAAGAA GCGC AACA GCGC CAGATGTACCCAGTT TERM 1421 1038327 - 1038316 - G 88 -2.2 -5.53991 | CACCGAGCAAAAAAA GGAC CAGT ATCC ACCAACGCAGATTTT TERM 1422 1038423 - 1038459 + r 71 -5.1 -4.49644 | opp_overlap 1038443, overlap 1038424 CAGAATGGTATAGGG TTTGTGTGGCAACGTCA GAA TGGAGTTGTCACACCAC TTTTAACTTTTTGAT ECUMN_1007 1038589 - 1038437 - | hypothetical protein TERM 1423 1039343 - 1039359 + G 70 -7.3 -4.11216 | overlap 1039344 CACCATGACCGTCAT TTGCTGA ATA TCAGCAG TTTTAGCGCTAAAGA TERM 1424 1039408 - 1039435 + G 72 -7.6 -3.96148 | AGCGTGGCTGGATGC CGCCAATGGCAA GACG TTGCCGACGGCG TTTCTGGTCGGCGGG ECUMN_1008 1038614 - 1039795 + | putative transcriptional regulator ybiU 1041027 - 1039762 - | hypothetical protein TERM 1425 1039865 - 1039875 + g 88 -8.2 -4.62069 | CGCGGGAAGTCGCCC GGCG ATG CGCC TTTTTCCAGTGCGGC TERM 1426 1040407 - 1040370 - G 74 -7.6 -4.08394 | overlap 1040358 1040371 AGACGTTGGCGAAAA CGTGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGCC CCGGAGTCGGTATGC TERM 1427 1040406 - 1040371 - G 72 -11.1 -3.04715 | overlap 1040370 GACGTTGGCGAAAAC GTGCTGATACGCTGG AAGCAG CCAGCGTTCCAGCGC CCCGGAGTCGGTATG TERM 1428 1041170 - 1041152 - R 95 -11.7 -4.43173 | AAAAAGAAGGGAAAA CCGGAGC GCATG GCTCCGG TAGAGAGGTCAGCTG ybiV 1041994 - 1041179 - | type II HAD phosphatase TERM 1429 1042135 - 1042105 - R 85 -13.2 -2.74012 | opp_overlap 1042093 TGATGATGTGAATGA TTTAGCCCGGCGAC GCC GCCGCCGGGCTGAG GAGATTACAGCATAT ybiW 1044572 - 1042140 - | putative glycyl radical cofactor protein TERM 1430 1042375 - 1042389 + g 72 -10 -3.35526 | overlap 1042370 TTGTCAGATTCGTTC TCCAGC GTT GCTGGA TTCAGTTTCTGGTTG TERM 1431 1044123 - 1044137 + g 71 -2.8 -4.77438 | opp_overlap 1044119 CGCTTTAATGATGCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT ybiY 1045504 - 1044578 - | putative AdoMet-dependent glycyl radical activating enzyme TERM 1432 1044843 - 1044856 + g 79 -3.7 -5.11033 | overlap 1044840 ATAATGATTTTTTTG CCCGC TGCG GCGAG TTTTTTCAGGTTATC TERM 1433 1046087 - 1046071 - g 70 -6.5 -4.20084 | ACCAGTTATTGAAAA TGCATGC GCC GCAGGCA AAAGTGTTAGCCGCA fsaA 1045608 - 1046270 + | fructose-6-phosphate aldolase 1 TERM 1434 1046303 - 1046323 + T 80 -11.1 -3.30124 | TCATAAATTGCTGAT GACGTGGCG CAG TGCCGCGTC TTATCAGGCCTGGAG moeB 1047095 - 1046346 - | molybdopterin synthase sulfurylase TERM 1435 1046434 - 1046465 + g 72 -8.7 -3.79668 | opp_overlap 1046426, overlap 1046431 1046430 TACATGACGATTTTG CCACTGGCAGGTT TGCCAT AACCTGCCAGCAG TTTGATCGCTTCCAT TERM 1436 1046577 - 1046563 - G 70 -5.6 -4.41348 | overlap 1046565 TTTTCGCCAAACAAA CGGCTG AGG CAGCGG TAGCAAGGCTCGCCG moeA 1048330 - 1047095 - | molybdopterin biosynthesis protein TERM 1437 1047439 - 1047427 - G 78 -10.5 -3.53444 | TCAGCGTTGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 1438 1047633 - 1047623 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGGGGATCGT TERM 1439 1048239 - 1048227 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG TAC CAGTG GCAGCGTTTCCTGGG TERM 1440 1048515 - 1048504 - H 70 -5.8 -4.36262 | overlap 1048506 ATATTTATAGCAAAA GTGG CGAG CCAC CCTTAATGGACGAAT TERM 1441 1049211 - 1049199 - g 73 -9.1 -3.65224 | opp_overlap 1049199 1049198 ATGCTACGCCAATAA CGCCA GTG TGGCG GTTTCATGTACCGGC iaaA 1048534 - 1049499 + | isoaspartyl dipeptidase with L-asparaginase activity TERM 1442 1050014 - 1049990 - g 77 -11.4 -3.15544 | opp_overlap 1049986 1050004 CGTTATCCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG yliA 1049519 - 1051357 + | putative peptide transport fused subunits of ABC superfamily: ATP-binding components TERM 1443 1052845 - 1052829 - g 71 -3 -4.82901 | gap 1, overlap 1052831 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG yliB 1051377 - 1052915 + | putative peptide transporter subunit: periplasmic-binding component of ABC superfamily TERM 1444 1053758 - 1053770 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT yliC 1052933 - 1053853 + | putative peptide transporter permease subunit: membrane component of ABC superfamily yliD 1053856 - 1054767 + | putative peptide transporter permease subunit: membrane component of ABC superfamily TERM 1445 1054907 - 1054878 - f 76 -6.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACAATTT TTGCAGCGGC ACAGCGTTCAGATAG yliE 1054945 - 1057293 + | conserved hypothetical protein; putative inner membrane protein TERM 1446 1057332 - 1057343 + G 79 -4.4 -4.95806 | overlap 1057341 AGTTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT TERM 1447 1057866 - 1057856 - g 72 -8.2 -3.72051 | overlap 1057849 TTTAAGAACGGTAAA CCGG TGA CCGG TGATGAATATAATGC TERM 1448 1058413 - 1058393 - g 72 -7.6 -3.91402 | gap 1, opp_overlap 1058402, overlap 1058387 GTAGATAAAGGTAAA GTCTACCGC TTCG GCGGT-GAC GAATTTGCGGTGATT yliF 1057301 - 1058629 + | putative diguanylate cyclase ECUMN_1023 1059028 - 1058699 - | hypothetical protein TERM 1449 1058755 - 1058767 + g 90 -6.9 -5.04868 | TCAAAATACGTAGTG CCGGG CCG CTCGG TTTTATTTCATTTCG ECUMN_1024 1059404 - 1059018 - | hypothetical protein yliG 1060955 - 1059630 - | putative AdoMet-dependent methyltransferase, UPF0004 family TERM 1450 1060935 - 1060923 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 1061168 - 1061551 + | biofilm regulator TERM 1451 1061547 - 1061591 + F 83 -7.2 -4.84359 | opp_overlap 1061555 1061559, overlap 1061556 1061559 CCATGCTTGAGAAGG CCTAAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 1452 1061583 - 1061555 - f 91 -9.6 -4.63542 | opp_overlap 1061547 1061556 1061559, overlap 1061559 GAGAAGGCCTAAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1453 1061556 - 1061583 + F 75 -9.3 -3.59063 | gap 1, opp_overlap 1061555 1061559, overlap 1061547 1061559 AGAAGGCCTAAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1454 1061559 - 1061579 + F 93 -12.6 -3.48703 | opp_overlap 1061559 1061555, overlap 1061556 1061547 AGGCCTAAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1455 1061579 - 1061559 - f 100 -12.6 -3.81256 | opp_overlap 1061556 1061547 1061559, overlap 1061555 AGGCCTAAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1456 1062127 - 1062139 + G 77 -2.7 -5.16841 | CGGCTGGTATTCGAC GGTAA AGG TTATC TTTTTGTTGCTCTGG TERM 1457 1062423 - 1062408 - g 71 -2.4 -4.92239 | overlap 1062412 GCAAAAAGGCAAAAA CTACGG CTGG CCGCTG GCAACCTGGGGAATC yliI 1061662 - 1062777 + | PQQ-dependent aldose sugar dehydrogenase precursor (asd) yliJ 1063400 - 1062774 - | putative glutathione S-transferase TERM 1458 1063679 - 1063694 + G 87 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT dacC 1063647 - 1064849 + | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) TERM 1459 1064885 - 1064861 - T 85 -12.1 -3.30159 | opp_overlap 1064861 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT TERM 1460 1064861 - 1064885 + T 100 -13.6 -3.39862 | opp_overlap 1064861 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT deoR 1065654 - 1064896 - | DNA-binding transcriptional repressor TERM 1461 1065406 - 1065417 + g 79 -3.6 -5.06414 | overlap 1065408 CGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG ybjG 1066308 - 1065712 - | undecaprenyl pyrophosphate phosphatase TERM 1462 1066090 - 1066080 - G 72 -5.4 -4.56597 | overlap 1066082 GGTCGTGCGGAAAAA GATG TCC CATC GTCCAGGACACAAAC cmr 1066593 - 1067825 + | multidrug efflux system protein TERM 1463 1067857 - 1067831 - T 100 -10.9 -5.71983 | opp_overlap 1067831 CGAAGGATAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCAAATTAATGG TERM 1464 1067831 - 1067857 + T 95 -13.1 -3.37464 | opp_overlap 1067831 CGAAGGATAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCAAATTAATGG ybjH 1068150 - 1067866 - | hypothetical protein ybjI 1069050 - 1068235 - | putative phosphatase ybjJ 1070258 - 1069050 - | putative transporter TERM 1465 1069838 - 1069825 - G 71 -3.1 -4.85599 | gap 1 CCCAGGCTATAAAAA CCG-TG CAT CATCGG CAAAACCGTCTTATT ybjK 1070342 - 1070878 + | putative DNA-binding transcriptional regulator TERM 1466 1070999 - 1070969 - T 72 -3.3 -4.97158 | gap 1, opp_overlap 1070996 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG ybjL 1072738 - 1071053 - | putative transporter TERM 1467 1071637 - 1071623 - G 83 -10 -4.09108 | opp_overlap 1071622 1071621 1071619 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACCCG ybjM 1073008 - 1073385 + | conserved hypothetical protein; putative inner membrane protein TERM 1468 1073411 - 1073379 - T 81 -3.3 -5.40625 | opp_overlap 1073387, overlap 1073387 ACAGCACAGAAAAAA TCAATAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 1469 1073403 - 1073387 - T 89 -10.1 -4.54301 | opp_overlap 1073387, overlap 1073379 GAAAAAATCAATAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG TERM 1470 1073387 - 1073403 + T 74 -9.4 -3.29511 | opp_overlap 1073387 1073379 GAAAAAATCAATAAA GCCCTC AACGC GAGGGC TTGTCAGACGATCAG grxA 1073672 - 1073415 - | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) ybjC 1073832 - 1074119 + | conserved hypothetical protein; putative inner membrane protein nfsA 1074103 - 1074825 + | nitroreductase A, NADPH-dependent, FMN-dependent TERM 1471 1075350 - 1075403 + G 76 -11 -3.27475 | gap 1, opp_overlap 1075370, overlap 1075348 1075351 1075370 CGTCGTGCTGGCGGA GACGCG-TCAGGCGGCCGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 1472 1075351 - 1075402 + G 90 -14.5 -2.56271 | gap 1, opp_overlap 1075370, overlap 1075350 1075348 1075370 GTCGTGCTGGCGGAG ACGCG-TCAGGCGGCCGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 1074886 - 1075788 + | ribosomal protein S6 modification protein ybjN 1075876 - 1076352 + | hypothetical protein TERM 1473 1076360 - 1076402 + F 89 -15 -2.77401 | opp_overlap 1076357 1076356, overlap 1076360 TCCACTGATAACTCC TTTCGAGTACGCAGTCGCTG CCG CAGTGACTGCGTGCTGCAAA ATTATCTGCTGTTTT TERM 1474 1076360 - 1076403 + F 100 -14.8 -3.65046 | gap 1, opp_overlap 1076357 1076356, overlap 1076360 TCCACTGATAACTCC TTTCG-AGTACGCAGTCGCTG CCG CAGTGACTGCGTGCTGCAAAA TTATCTGCTGTTTTT TERM 1475 1076589 - 1076600 + F 71 -4.4 -4.63218 | AGCAGTGCTGGCCGG GAGA GAGT TCTC TTTTCTTACACCGCG TERM 1476 1076645 - 1076627 - f 77 -3.2 -5.24129 | opp_overlap 1076627 CGCGCCGATAAAAAA TATGCA CGTTTAT TGCATA TCTTTCAGTGTGACA TERM 1477 1076667 - 1076684 + F 71 -8.5 -3.53012 | AGTGTGACAACTTTT GTTCGTT TGTT AACGAAC TTTCAGAAGGAAAGA potF 1076703 - 1077815 + | putrescine transporter subunit: periplasmic-binding component of ABC superfamily TERM 1478 1078477 - 1078458 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 1077910 - 1079043 + | putrescine transporter subunit: ATP-binding component of ABC superfamily potH 1079053 - 1079997 + | putrescine transporter subunit: membrane component of ABC superfamily TERM 1479 1080535 - 1080545 + G 78 -5.4 -4.81083 | ATCTTGGTGCGACGC CACT GAA AGTG TTTTTCGTCATTACG TERM 1480 1080592 - 1080604 + G 75 -5.5 -4.62475 | CCGCGATCATTTCTG GCTGG TTA CTAGC TTTTACTTTGTCGCT potI 1079994 - 1080839 + | putrescine transporter subunit: membrane component of ABC superfamily TERM 1481 1080869 - 1080893 + F 95 -12.2 -4.25104 | opp_overlap 1080872, overlap 1080872 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG TERM 1482 1080890 - 1080872 - f 88 -11.7 -3.48772 | opp_overlap 1080869 1080872 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG TERM 1483 1080872 - 1080890 + F 95 -11.7 -4.25256 | opp_overlap 1080872, overlap 1080869 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG ybjO 1080899 - 1081387 + | conserved hypothetical protein; putative inner membrane protein rumB 1081428 - 1082555 + | 23S rRNA m(5)U747 methyltransferase TERM 1484 1082603 - 1082650 + F 100 -16.6 -3.12892 | opp_overlap 1082605 1082608, overlap 1082605 1082608 ACATCCATTCTAAAT AATAACCGTGATCGATCGATTA ATAT TAACCGATCGATCATGGTTATA TATTGCGCTATTTTT TERM 1485 1082648 - 1082605 - f 100 -19.2 -3.94188 | opp_overlap 1082603 1082605 1082608, overlap 1082608 ATCCATTCTAAATAA TAACCGTGATCGATCGATTA ATAT TAACCGATCGATCATGGTTA TATATTGCGCTATTT TERM 1486 1082605 - 1082648 + F 100 -19.2 -3.10901 | opp_overlap 1082605 1082608, overlap 1082603 1082608 ATCCATTCTAAATAA TAACCGTGATCGATCGATTA ATAT TAACCGATCGATCATGGTTA TATATTGCGCTATTT TERM 1487 1082645 - 1082608 - f 100 -16.5 -4.09628 | opp_overlap 1082605 1082603 1082608, overlap 1082605 CATTCTAAATAATAA CCGTGATCGATCGATTA ATAT TAACCGATCGATCATGG TTATATATTGCGCTA TERM 1488 1082608 - 1082645 + F 100 -16.5 -3.68738 | opp_overlap 1082608 1082605, overlap 1082605 1082603 CATTCTAAATAATAA CCGTGATCGATCGATTA ATAT TAACCGATCGATCATGG TTATATATTGCGCTA TERM 1489 1083139 - 1083115 - g 72 -8.5 -3.74693 | opp_overlap 1083114 1083112 1083115, overlap 1083116 TCCTACGCCATGAAA GCCGCAACGCA AAT TGCGTTGGGGG ATAATTTTGGTTACG TERM 1490 1083138 - 1083116 - g 75 -12 -2.84602 | opp_overlap 1083115 1083114 1083112, overlap 1083115 CCTACGCCATGAAAG CCGCAACGCA AAT TGCGTTGGGG GATAATTTTGGTTAC ECUMN_1050 1082836 - 1084179 + | Putative transport protein ECUMN_1051 1084201 - 1084521 + | Putative phosphotransferase enzyme II, B component TERM 1491 1084804 - 1084785 - g 72 -5.6 -4.57569 | GGAGCTGCTTAAAAA GGCGGGGA TCTA TACCCACC TGATAAGCGATCATT ECUMN_1052 1084534 - 1086015 + | putative sulfatase TERM 1492 1086020 - 1086062 + T 71 -10 -2.77899 | gap 1, opp_overlap 1086019, overlap 1086017 GGTTAGCGTAGAGAG GTGATGTTGCCGGAGTGGG CGAACA CCCACTCCGGCAA-ATGAA TACTTACTGCGGGAA artJ 1086797 - 1086066 - | arginine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1493 1086415 - 1086439 + g 77 -7.2 -4.46757 | opp_overlap 1086415 TTTTCCATCCCAATA CGTTTGCC TTTCAGATC GGCAAACG TTTTGTAGGTATCTT TERM 1494 1086946 - 1086920 - R 100 -15.3 -6.01187 | opp_overlap 1086920 AATGAAATAAAAAAA GACGGACAACT TAGTG AGTTGTCCGTC TTCATTATAAGAATT TERM 1495 1086920 - 1086946 + r 100 -16 -3.4489 | opp_overlap 1086920 AATGAAATAAAAAAA GACGGACAACTT AGT GAGTTGTCCGTC TTCATTATAAGAATT artM 1087691 - 1087023 - | arginine transporter subunit ; membrane component of ABC superfamily artQ 1088407 - 1087691 - | arginine transporter subunit ;membrane component of ABC superfamily TERM 1496 1088363 - 1088353 - G 74 -8.2 -3.99898 | opp_overlap 1088359, overlap 1088354 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 1089145 - 1088414 - | arginine transporter subunit ; periplasmic-binding component of ABC superfamily artP 1089891 - 1089163 - | arginine transporter subunit ; ATP-binding component of ABC superfamily TERM 1497 1090078 - 1090050 - R 79 -9 -3.96148 | gap 1, opp_overlap 1090050 1090049 GTCGGCGAGCATAAA TGT-CGGCATTCC TCAC GAAATGCCGGACA ATTTACGGGGTTTAT ybjP 1090624 - 1090109 - | conserved hypothetical protein, putative exported protein TERM 1498 1090389 - 1090414 + g 72 -7.5 -3.92373 | TGACTATTATCGCGG CTGGCATCGCT AAGT AGGGTTGCCAG TTTGTCACTCAAATA ECUMN_1059 1090820 - 1090638 - | hypothetical protein TERM 1499 1092085 - 1092070 - g 74 -3.2 -4.88405 | opp_overlap 1092070 AATTTTGAAACAAAA CCTGTT CATT ATCAGG ATTTATTAACACGAT ECUMN_1060 1091239 - 1093041 + | hypothetical protein ybjQ 1093252 - 1093575 + | hypothetical protein ybjR 1093572 - 1094402 + | putative cell wall amidase and lipoprotein ybjS 1095412 - 1094399 - | putative NAD(P)H-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 1500 1094535 - 1094563 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGACGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 1096941 - 1095511 - | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain TERM 1501 1096027 - 1096042 + g 81 -6.1 -4.81163 | GTCGTATCCCCAGTC GCTGG AGTTGA CCAGC TTTTCTTCCTCTTTC ltaE 1097953 - 1096952 - | L-allo-threonine aldolase, PLP-dependent TERM 1502 1097519 - 1097534 + g 71 -9 -3.47387 | overlap 1097513 1097511 TTTCAGGTATTCTCG CGGCAA CACT TTGCCG TTGTGAGTGTTTTCC poxB 1099708 - 1097990 - | pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding TERM 1503 1099831 - 1099806 - R 85 -11.9 -3.38581 | overlap 1099804 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATAAGGCGATTATGC hcr 1100809 - 1099841 - | HCP oxidoreductase, NADH-dependent TERM 1504 1100447 - 1100435 - G 70 -10.5 -2.71119 | overlap 1100434 ACGCATCGACATAAT CGGCG TGA CGCCG CAGCCTGCCGCCAGC hcp 1102473 - 1100821 - | hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases TERM 1505 1101322 - 1101338 + g 71 -9.4 -3.53012 | opp_overlap 1101313 1101312 ATCAATCAGCGTATC CGCTGC GCCAA GCAGCG TTTGACGACCAAAGC TERM 1506 1102279 - 1102267 - G 95 -9.1 -4.83615 | CAGGGTTGAGAAAAA TGCGC GTG GCGCA AAGCTGTCTACATCG TERM 1507 1102647 - 1102632 - R 81 -3.2 -5.42259 | overlap 1102634 TTACGCGGAAAAAAA GGCGAT GAGG ATCGGC ACTAACAGACTAAGA ybjE 1103516 - 1102617 - | putative transporter TERM 1508 1103988 - 1103968 - R 100 -11.1 -5.15381 | opp_overlap 1103968 AATATATTTAAAAAA GGCCTGACA TTG CGCCAGGCC TTCTGCGTTAATTAA aqpZ 1104695 - 1104000 - | aquaporin TERM 1509 1104588 - 1104570 - G 79 -12.4 -3.12847 | opp_overlap 1104585 AACGGTCAGACCGAA TGCCAGCG CCA CGCCGGCA AAACCAATGCCTAAT TERM 1510 1105027 - 1105067 + H 78 -10.5 -3.70068 | opp_overlap 1105040 1105041, overlap 1105028 CATTTTTCAGACATT TGCCATGCTTAAATGTGAT GTC ATCACGTATTAGCATGGCC TTTCCCGTTATACTG TERM 1511 1105028 - 1105066 + H 86 -14 -2.81559 | opp_overlap 1105040 1105041, overlap 1105027 ATTTTTCAGACATTT GCCATGCTTAAATGTGAT GTC ATCACGTATTAGCATGGC CTTTCCCGTTATACT ybjD 1105121 - 1106779 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 1512 1106801 - 1106850 + T 84 -6.6 -5.14965 | gap 3, overlap 1106803 1106804 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT ybjX 1107768 - 1106776 - | hypothetical protein TERM 1513 1106804 - 1106848 + g 73 -11.6 -2.80472 | gap 2, overlap 1106803 1106801 ATCGTGGCCATTTGT GGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC CGTTTTTTACTGGCG TERM 1514 1107609 - 1107598 - G 71 -3 -4.7373 | CGAGCGCAGCAAAAA TTTC TGGC GAAA ACTACGGCGATGCCA macA 1107883 - 1108998 + | macrolide transporter subunit, membrane fusion protein (MFP) component TERM 1515 1110030 - 1110018 - g 75 -5.5 -4.66163 | overlap 1110021 ATCGCCATCCAAAAA CAACC GTG GGTCG CCTCAGCCACACCTG TERM 1516 1110262 - 1110294 + G 85 -13.5 -3.25823 | ATGTGGTTGGCGAGG TGATTCTGGTCGGCA ATA TGCCCGCCAGAGTCA TTGGTGTGGCGGAAG macB 1108995 - 1110941 + | fused macrolide transporter subunits of ABC superfamily: ATP-binding component ; membrane component TERM 1517 1110956 - 1110976 + T 100 -12.6 -4.35926 | opp_overlap 1110956 ATTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT TERM 1518 1110976 - 1110956 - T 100 -12.6 -4.9725 | opp_overlap 1110956 ATTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT cspD 1111237 - 1111013 - | cold shock protein homolog TERM 1519 1111672 - 1111682 + G 77 -6.8 -4.45738 | opp_overlap 1111672 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG clpS 1111560 - 1111880 + | regulatory protein for ClpA substrate specificity TERM 1520 1111888 - 1111875 - f 86 -8.1 -4.85599 | TGTACGCTAGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1521 1112583 - 1112572 - g 70 -7.2 -4.07568 | CTGGTGTCGGTAAAA CCGC GATT GCGG AAGGTCTTGCCTGGC TERM 1522 1112736 - 1112756 + G 78 -8.3 -4.25056 | CTCAAGCAGCTGGAG CAGGATACT AAC AGCATCCTG TTTATTGATGAGATC TERM 1523 1112851 - 1112835 - g 76 -9.4 -3.76492 | GCTAACCTGATCAAA CCGCTG CTCTC CAGCGG TAAAATTCGCGTAAT TERM 1524 1114093 - 1114053 - g 90 -6.8 -5.11033 | opp_overlap 1114055 1114061 GACAACCTGAAAAAA CCGCTCGCCAACGAAC TGTTGTTTG GTTCGCTGGTGGACGG CGGTCAGGTGACGGT clpA 1111911 - 1114187 + | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity TERM 1525 1114213 - 1114240 + T 100 -15 -5.38054 | AGGTAGGTTGGTGAA GTCCGTAATCTC GAAA GAGGTTACGGAC TTTTTGTTTGTAGGC ECUMN_1078 1114703 - 1114305 - | hypothetical protein TERM 1526 1114616 - 1114635 + g 90 -7.8 -4.92385 | opp_overlap 1114616, overlap 1114611 TAAAATGCGAAAAAA GCTCGTAC TTTC GTACGCGC TTTTCTTTAAATATG TERM 1527 1114635 - 1114616 - G 91 -7.8 -5.15117 | opp_overlap 1114611 1114616 TAAAATGCGAAAAAA GCTCGTAC TTTC GTACGCGC TTTTCTTTAAATATG TERM 1528 1114724 - 1114736 + r 71 -9.1 -3.28791 | TCGTGGTCTGTCCAA CTGGC TGC GCCAG TTGTCGAACCCCGGT TERM 1529 1114814 - 1114795 - R 100 -10 -5.79526 | opp_overlap 1114793 1114795 ATATGCGAAAAAAAA GCTCGCAC TTTC GTACGAGC TCTTCTTTGAATATG TERM 1530 1114903 - 1114915 + r 71 -9.1 -3.28791 | TCGTGGTCTGTCCAA CTGGC TGC GCCAG TTGTCGAACCCCGGT TERM 1531 1114993 - 1114974 - R 100 -10 -5.79526 | opp_overlap 1114972 1114974 ATATGCGAAAAAAAA GCTCGCAC TTTC GTACGAGC TCTTCTTTGAATATG TERM 1532 1115305 - 1115289 - R 100 -10.1 -5.56263 | opp_overlap 1115289 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT TERM 1533 1115289 - 1115305 + r 79 -7.9 -4.40037 | opp_overlap 1115289 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT infA 1115566 - 1115348 - | translation initiation factor IF-1 aat 1116555 - 1115851 - | leucyl/phenylalanyl-tRNA-protein transferase TERM 1534 1116432 - 1116420 - G 81 -6.3 -4.7329 | overlap 1116423 AAAACCACGGAAAAA TACCA CGC TGGTA AGCCATTAACAGGCG cydC 1118318 - 1116597 - | fused cysteine transporter subunits of ABC superfamily: membrane component ; ATP-binding component cydD 1120085 - 1118319 - | fused cysteine transporter subunits of ABC superfamily: membrane component ; ATP-binding component TERM 1535 1119492 - 1119475 - G 70 -5.5 -4.42653 | AGGCGATCGAGAAAA TGCCCAC TTAA GCGAGCA AGAGCGAGAAAGTTA TERM 1536 1120182 - 1120148 - R 87 -6.5 -5.22794 | gap 1, opp_overlap 1120149 1120152, overlap 1120152 ACAACGAGGAAAAAA TAAAGGCGAC-CCATA GTCG CATGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1537 1120149 - 1120181 + r 77 -7.1 -4.33854 | gap 1, opp_overlap 1120148 1120152, overlap 1120152 CAACGAGGAAAAAAT AAAGGCGAC-CCAT AGTCGC ATGGTGTCGCCTTC TTTACTTTTGTTACT TERM 1538 1120178 - 1120152 - R 93 -9.5 -5.0917 | gap 1, opp_overlap 1120152 1120149, overlap 1120148 CGAGGAAAAAATAAA GGCGAC-CCATA GTCG CATGGTGTCGCC TTCTTTACTTTTGTT TERM 1539 1120152 - 1120178 + r 80 -8.8 -4.25231 | gap 1, opp_overlap 1120148 1120152, overlap 1120149 CGAGGAAAAAATAAA GGCGAC-CCAT AGTCGC ATGGTGTCGCC TTCTTTACTTTTGTT trxB 1121173 - 1120208 - | thioredoxin reductase, FAD/NAD(P)-binding TERM 1540 1121036 - 1121053 + g 81 -6.9 -4.66163 | overlap 1121023 TTCCACTTCCGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT lrp 1121719 - 1122213 + | DNA-binding transcriptional dual regulator, leucine-binding TERM 1541 1122267 - 1122303 + F 78 -8.8 -4.13767 | gap 1, opp_overlap 1122269 1122273, overlap 1122270 1122273 TCCTGTTAATCCATA CAG-CAACAGTACTGGG GTAA CCTGGTACTGTTGTCCG TTTTAGCATCGGGCA TERM 1542 1122270 - 1122299 + F 86 -13.7 -2.75577 | opp_overlap 1122269 1122273, overlap 1122267 1122273 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG TERM 1543 1122273 - 1122296 + F 75 -9.6 -3.52113 | opp_overlap 1122273 1122269, overlap 1122270 1122267 TAATCCATACAGCAA CAGTACTGGG GTAA CCTGGTACTG TTGTCCGTTTTAGCA TERM 1544 1124095 - 1124058 - g 74 -3.2 -5.00616 | opp_overlap 1124064 1124069, overlap 1124016 1124059 1124060 1124062 TCTGGCGTGAAAAAA GCGACACTGGCGACGG GGGCTG CCGCAACCGTTGCCGC GCCAGTCTTCAGTCT ftsK 1122348 - 1126454 + | DNA-binding membrane protein required for chromosome resolution and partitioning lolA 1126610 - 1127224 + | chaperone for lipoproteins ycaJ 1127235 - 1128578 + | recombination protein serS 1128669 - 1129961 + | seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine TERM 1545 1129954 - 1129968 + F 70 -2.8 -4.89852 | opp_overlap 1129954 ACGGACTGGAATATA TTGGCT AAT ACCCAA TTTTTCTGAATCTAA TERM 1546 1130000 - 1129987 - f 91 -9.5 -4.74103 | opp_overlap 1129987 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT TERM 1547 1129987 - 1130000 + F 100 -9.5 -5.72616 | opp_overlap 1129987 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT TERM 1548 1131190 - 1131176 - g 72 -5.7 -4.4891 | GCTACGACGAGAAAA CACTG CCAGC CAGTG CGCCGAAAAATGGTC dmsA 1130200 - 1132644 + | dimethyl sulfoxide reductase, anaerobic, subunit A dmsB 1132655 - 1133272 + | dimethyl sulfoxide reductase, anaerobic, subunit B dmsC 1133274 - 1134137 + | dimethyl sulfoxide reductase, anaerobic, subunit C TERM 1549 1134143 - 1134170 + T 91 -8.4 -5.04733 | opp_overlap 1134148, overlap 1134148 CGCAAGCTAATCAGT AACAACCGGGGT TTCG ACCCCGGTTCTC TTTTATTTCTGCTTC TERM 1550 1134165 - 1134148 - T 100 -12.7 -3.77722 | opp_overlap 1134148 1134143 GCTAATCAGTAACAA CCGGGGT TTCG ACCCCGG TTCTCTTTTATTTCT TERM 1551 1134148 - 1134165 + T 100 -12.7 -4.14927 | opp_overlap 1134148, overlap 1134143 GCTAATCAGTAACAA CCGGGGT TTCG ACCCCGG TTCTCTTTTATTTCT ycaC 1134799 - 1134173 - | putative hydrolase ycaD 1135114 - 1136262 + | putative MFS-type transporter protein TERM 1552 1136273 - 1136304 + F 100 -13.2 -5.82036 | opp_overlap 1136268 1136273 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1553 1136304 - 1136273 - f 91 -13.2 -3.26596 | opp_overlap 1136273, overlap 1136268 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT TERM 1554 1136522 - 1136496 - g 71 -3 -4.73388 | gap 1, opp_overlap 1136496 AATGTTCAGGAAAAA CAGCTGCGATG GTACAA CATTGC-GCTG ATGTCTTTTATCACT TERM 1555 1136570 - 1136592 + G 84 -4 -5.17353 | opp_overlap 1136570, overlap 1136570 1136573 1136576 CGTTGTTAATAACTA CGCCAACCAG GGG CTGGTGGTTG TTTTTTCATGGGTGT TERM 1556 1136573 - 1136589 + G 77 -6.5 -4.67552 | opp_overlap 1136570, overlap 1136570 1136570 1136576 TGTTAATAACTACGC CAACCAG GGG CTGGTGG TTGTTTTTTCATGGG ycaM 1136472 - 1137902 + | putative transporter TERM 1557 1138076 - 1138099 + T 93 -12.5 -3.53761 | opp_overlap 1138076 GAGCGGAATAAAAAA GCGGCAACT CAAAAA AGTTGCCGC TTTACGGGGAAATTA TERM 1558 1138099 - 1138076 - T 100 -13.2 -5.46657 | opp_overlap 1138076 GAGCGGAATAAAAAA GCGGCAACTC AAAA AAGTTGCCGC TTTACGGGGAAATTA pflA 1138852 - 1138112 - | pyruvate formate lyase activating enzyme 1 TERM 1559 1138547 - 1138530 - G 71 -2.7 -4.75219 | gap 1 TAACGACGAACAAAA CCGT-TGG TAT CCAGACAG GTATGAATGCCTTCT TERM 1560 1138675 - 1138658 - G 72 -7.7 -3.87869 | opp_overlap 1138658 GGAAGCGTTCATAAA GTGGCGA TAGG TCACCAC TTCCTTCATCAAATC TERM 1561 1138969 - 1139013 + r 83 -7.2 -4.80882 | gap 1, opp_overlap 1138982, overlap 1138970 1138982 TGACAAAAAAGGCTC TCGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACGC TTTTTACTGTACGAT TERM 1562 1138970 - 1139012 + r 81 -10.7 -3.47806 | gap 1, opp_overlap 1138982, overlap 1138969 1138982 GACAAAAAAGGCTCT CGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACG CTTTTTACTGTACGA TERM 1563 1138982 - 1139001 + r 85 -9.2 -4.33851 | opp_overlap 1138982, overlap 1138970 1138969 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT TERM 1564 1139001 - 1138982 - R 100 -11.4 -5.00616 | opp_overlap 1138982 1138970 1138969 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT pflB 1141326 - 1139044 - | pyruvate formate lyase I focA 1142238 - 1141381 - | formate transporter TERM 1565 1142593 - 1142569 - R 71 -7.8 -3.78962 | opp_overlap 1142570, overlap 1142570 GCAAATATATGTAAA GCGGGGCATT AAAAA AACGCCCCGT AATATAACTCAGACG TERM 1566 1142592 - 1142570 - R 78 -11.3 -2.86654 | opp_overlap 1142570, overlap 1142569 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC TERM 1567 1142611 - 1142641 + r 73 -2.5 -5.07652 | opp_overlap 1142611 1142618, overlap 1142616 1142618 TATAACTCAGACGAA TCATTAAGCCTAC ATTGC GTAGGCTATTTGA TTTTATTTTGCCCAG TERM 1568 1142616 - 1142636 + r 70 -5.4 -4.41486 | opp_overlap 1142611 1142618, overlap 1142611 1142618 CTCAGACGAATCATT AAGCCTAC ATTGC GTAGGCTA TTTGATTTTATTTTG TERM 1569 1142618 - 1142634 + r 71 -8 -3.76546 | opp_overlap 1142611 1142618, overlap 1142616 1142611 CAGACGAATCATTAA GCCTAC ATTGC GTAGGC TATTTGATTTTATTT ycaO 1144404 - 1142644 - | hypothetical protein TERM 1570 1142770 - 1142758 - G 72 -4.7 -4.61566 | opp_overlap 1142759, overlap 1142759 TTGCAAACCATAAAA CGCCG CTT CGCCG CTCATTGCCGCACTG TERM 1571 1142990 - 1143000 + g 75 -6.8 -4.41047 | overlap 1142985 TCGCCACCAGCCAGC GCCA GCA TGGC TTTTAATTCACCGAT TERM 1572 1144560 - 1144577 + G 77 -6.3 -4.62054 | TGATCTCCACCGTAT GGCATTT GATA AAGTGCC TTTTGATTTCCTTGG TERM 1573 1144668 - 1144681 + G 77 -5.9 -4.66953 | overlap 1144679 CGGAAGACGCGGTGT GCGGC AGAT GTCGC TTTTTGAAGTGTTAA ycaP 1144534 - 1145226 + | conserved hypothetical protein; putative inner membrane protein TERM 1574 1146042 - 1146021 - g 73 -3.7 -4.82901 | gap 1, opp_overlap 1146038, overlap 1146023 TGGCGCGCAGAAAAA TATC-GGCCC GGC AGGCCTGACA ATCGTCATCGTTCGT serC 1145425 - 1146513 + | 3-phosphoserine/phosphohydroxythreonine aminotransferase TERM 1575 1146533 - 1146553 + F 100 -12.6 -5.4659 | GAAATTTTGCTTAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG aroA 1146584 - 1147867 + | 5-enolpyruvylshikimate-3-phosphate synthetase TERM 1576 1147912 - 1147930 + F 100 -12.4 -5.75945 | opp_overlap 1147912 1147910 CTTTCTTTTCAAAGA CGTCGGCA CAT TGCCGGCG TTTTTTTTCGGACCT TERM 1577 1147930 - 1147912 - f 76 -10.2 -3.34398 | opp_overlap 1147912, overlap 1147910 CTTTCTTTTCAAAGA CGTCGGCA CAT TGCCGGCG TTTTTTTTCGGACCT ycaL 1148037 - 1148801 + | putative lipoprotein with metallohydrolase domain TERM 1578 1148917 - 1148937 + F 75 -8.9 -3.66784 | opp_overlap 1148930, overlap 1148930 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC TERM 1579 1149293 - 1149330 + G 81 -10.5 -3.57561 | opp_overlap 1149259, overlap 1149270 AAGTCGCGGCATTCC CACGCGTTCGTGAAGCA TTAT TGCGTCGCCAACGCGCG TTTCGCGAATTACCA TERM 1580 1149526 - 1149514 - g 70 -6.9 -4.04806 | GCCGAGATCAAAGAA CGCGA CGA CCGCG ATCGTAACCGAGCGG TERM 1581 1149634 - 1149619 - g 70 -4 -4.68424 | gap 1, overlap 1149628 1149630 CAAGTGATTGAAAAA GCGC-TA CAA TACGCGC GCCAGAAATTGGCTC cmk 1148974 - 1149657 + | cytidylate kinase TERM 1582 1149942 - 1149932 - g 88 -8.2 -4.63527 | overlap 1149933 1149934 TGAGCAGTTCAAAAA CGCC CAG GGCG AGCTGGAAATCCAGG rpsA 1149768 - 1151441 + | 30S ribosomal subunit protein S1 TERM 1583 1151452 - 1151473 + F 84 -9.5 -4.29929 | overlap 1151446 AGTAATTCTCTGACT CTTCGGGAT TTTT ATTCCGAAG TTTGTTGAGTTTACT TERM 1584 1151550 - 1151520 - f 90 -12.7 -3.33696 | gap 1, opp_overlap 1151527, overlap 1151523 1151527 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAGCAACAGCA TERM 1585 1151548 - 1151523 - f 93 -15.5 -2.84098 | opp_overlap 1151527, overlap 1151520 1151527 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAGCAACAG TERM 1586 1151527 - 1151544 + F 95 -14.1 -3.18264 | opp_overlap 1151523 1151520 1151527 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA TERM 1587 1151544 - 1151527 - f 100 -14.1 -3.30554 | opp_overlap 1151527, overlap 1151523 1151520 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA ihfB 1151601 - 1151885 + | integration host factor (IHF), DNA-binding protein, beta subunit TERM 1588 1151907 - 1151937 + F 81 -9.8 -4.11404 | opp_overlap 1151915, overlap 1151908 1151915 ACTCAAACTTGAACG CGAGAAAAGCACCT GTC GGGTGCTTTTTTCA TTTCTCTAATCTGGA TERM 1589 1151908 - 1151936 + F 86 -13.3 -3.0636 | opp_overlap 1151915, overlap 1151907 1151915 CTCAAACTTGAACGC GAGAAAAGCACCT GTC GGGTGCTTTTTTC ATTTCTCTAATCTGG TERM 1590 1151929 - 1151915 - f 77 -7.1 -4.42788 | opp_overlap 1151915 1151908 1151907 TTGAACGCGAGAAAA GCACC TGTCG GGTGC TTTTTTCATTTCTCT TERM 1591 1151915 - 1151929 + F 95 -7.8 -5.4387 | opp_overlap 1151915, overlap 1151908 1151907 TTGAACGCGAGAAAA GCACCT GTC GGGTGC TTTTTTCATTTCTCT TERM 1592 1153077 - 1153103 + G 84 -3.6 -5.22312 | overlap 1153080 1153081 1153098 CGCAAAGTTTATGGC TCTCTGCCGC TGCGGTC GCGGCACTGA TTTTTTGGTATCAGT ycaI 1152092 - 1154356 + | conserved hypothetical protein; putative inner membrane protein TERM 1593 1155235 - 1155248 + G 77 -6.7 -4.44211 | GGATAACCTGACTGC CGGTA CGAT TACCG TTGTTTTCTCTTCAA msbA 1154393 - 1156141 + | fused lipid transporter subunits of ABC superfamily: membrane component ; ATP-binding component TERM 1594 1156173 - 1156192 + G 75 -11.4 -2.88677 | overlap 1156175 TGGTGAATCCCCTTT GTGGCGGC TATT GCTGCCAC TCTCCTGGTTGTATG TERM 1595 1156273 - 1156249 - g 75 -5.5 -4.61873 | overlap 1156254 TGCTATAAACTAAAA CTGAAGCGCGC CTG GCGTGCCCCCG TACCGGTTGTCGTGG TERM 1596 1156544 - 1156534 - g 70 -6.8 -4.09685 | TCTGATGCGGTAAAA GCCA TTC TGGC GCAACACCCTGATGT TERM 1597 1156842 - 1156866 + G 74 -2.9 -5.0133 | gap 2, overlap 1156842 1156843 ACATGTAGTGGCGAT G-GCGG-GGAT TGGAC ATCCGCCGCGC TTTTTTGCCACGCTG lpxK 1156138 - 1157124 + | lipid A 4'kinase TERM 1598 1158059 - 1158070 + G 74 -2.2 -5.10154 | gap 1, opp_overlap 1158059 TCTGGGATCGCAAAC GC-GC AGA GCAGC TTTTTGATTTTAGCT TERM 1599 1158119 - 1158129 + G 70 -6.8 -4.00512 | opp_overlap 1158119 1158118 CCCCAGCGCCGAAAC GCCA GTA TGGC TATTTTGTTCTGCCG ycaQ 1157161 - 1158393 + | hypothetical protein ycaR 1158445 - 1158627 + | hypothetical protein kdsB 1158624 - 1159370 + | 3-deoxy-manno-octulosonate cytidylyltransferase ycbJ 1159524 - 1160417 + | hypothetical protein ycbC 1161173 - 1160394 - | conserved hypothetical protein; putative inner membrane protein ECUMN_1114 1161240 - 1161076 - | hypothetical protein TERM 1600 1161855 - 1161840 - g 100 -2.4 -5.93252 | overlap 1161842 CCGAAAAAGAAAAAA CGGACG CTTT CGCCAG ATTATCCACGCGACC smtA 1161309 - 1162094 + | putative AdoMet-dependent methyltransferase TERM 1601 1163231 - 1163202 - g 70 -5.7 -4.36914 | gap 1, opp_overlap 1163229 TTGCCGTGTACAAAA CCAGA-CAAGTGCC GCT GGATCTTGGTCTGG TGGTACGCGAATATC TERM 1602 1163259 - 1163288 + G 78 -9.3 -3.99374 | gap 1, opp_overlap 1163257, overlap 1163229 1163260 ATCTGTCACAGTATC CGCGTGC-ACGTCA CTT TGACGTTGCGCGCA TTGTTATTGATCAGG TERM 1603 1163260 - 1163287 + G 79 -12.8 -2.99142 | gap 1, opp_overlap 1163257, overlap 1163229 1163259 TCTGTCACAGTATCC GCGTGC-ACGTCA CTT TGACGTTGCGCGC ATTGTTATTGATCAG mukF 1162091 - 1163413 + | Involved in chromosome partioning, Ca2+ binding protein TERM 1604 1163465 - 1163480 + G 70 -10.4 -3.17075 | GAATCCGTTATTTCC GGCGCT GGAC AGCGCC TTACGTTCAGGCCGC mukE 1163421 - 1164098 + | protein involved in chromosome partitioning TERM 1605 1165485 - 1165470 - g 81 -4.7 -5.10497 | AAGCGACTGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC TERM 1606 1167492 - 1167478 - g 72 -8.5 -3.82202 | opp_overlap 1167489 CATGGTGAAAGATAA CGGCG TTGAG CGCCG CTTACACCGTCGTGA mukB 1164098 - 1168558 + | fused chromosome partitioning protein: putative nucleotide hydrolase ; conserved hypothetical protein ; conserved protein TERM 1607 1168586 - 1168561 - f 74 -7.5 -4.1899 | opp_overlap 1168565, overlap 1168565 CCAGGCGAGTTAAAA TGAAGGCGGCA GCAA TGCCGCCTTTT CTTTTTCCGAAAACT TERM 1608 1168582 - 1168565 - f 95 -12.7 -3.69605 | opp_overlap 1168565, overlap 1168561 GCGAGTTAAAATGAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1609 1168565 - 1168582 + F 100 -12.7 -5.26119 | opp_overlap 1168565 1168561 GCGAGTTAAAATGAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA ycbB 1168819 - 1170666 + | putative exported enzyme ycbK 1170847 - 1171395 + | hypothetical protein TERM 1610 1171528 - 1171489 - g 76 -7.7 -4.15044 | gap 1, overlap 1171490 TCTGGTGTGAACAAA CCCGCTTGGCCGCACTGG TCGAT CCTG-GCGGCGATGCGGA AAAAATCAAACAGGA ycbL 1171422 - 1172069 + | putative metal-binding hydrolase TERM 1611 1172077 - 1172109 + T 91 -9.9 -4.62471 | opp_overlap 1172084, overlap 1172084 TCTGGTAAAGGCGCA TAAAAAAGCCCGCTT TTT AAGCGGGCTTCATTG TTTTTAACGCTTACA TERM 1612 1172084 - 1172102 + T 100 -14.6 -3.74868 | opp_overlap 1172084, overlap 1172077 AAGGCGCATAAAAAA GCCCGCTT TTT AAGCGGGC TTCATTGTTTTTAAC TERM 1613 1172102 - 1172084 - T 100 -14.6 -5.25803 | opp_overlap 1172084 1172077 AAGGCGCATAAAAAA GCCCGCTT TTT AAGCGGGC TTCATTGTTTTTAAC aspC 1173310 - 1172120 - | aspartate aminotransferase, PLP-dependent TERM 1614 1172797 - 1172819 + g 89 -14.2 -3.18912 | opp_overlap 1172785 ACAGCACTACGTCGC CAGCCTGAGC TTC GTTCAGGCTG TTAATCAGTGCATCG TERM 1615 1173463 - 1173448 - R 100 -9 -5.97575 | opp_overlap 1173448 AAGGCATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA TERM 1616 1173448 - 1173463 + r 93 -9 -5.07107 | opp_overlap 1173448 AAGGCATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA ompF 1174583 - 1173495 - | outer membrane porin 1a (Ia;b;F) TERM 1617 1174015 - 1174035 + g 70 -4.7 -4.57569 | gap 1, overlap 1174017 CCGTCGCCGTTAGAG CG-GCGTG CAGTGT CACGCTCG TTTTTACCCAGGTAC TERM 1618 1175035 - 1175009 - R 81 -2.2 -5.4833 | opp_overlap 1175010, overlap 1175010 1175013 1175014 TCAGCTAAGAAAAAA CTAATCCGCAAT AAG AATGCGGGTTAT TTTTTGTGCGTAAAT TERM 1619 1175010 - 1175034 + r 91 -7.9 -5.28176 | opp_overlap 1175010 1175009 1175013 1175014 CAGCTAAGAAAAAAC TAATCCGCAAT AAG AATGCGGGTTA TTTTTTGTGCGTAAA TERM 1620 1175171 - 1175152 - R 100 -13.6 -5.75599 | opp_overlap 1175154 GAAAGGATAAAAAAA GAGCCAGC GGGT GCTGGCTC TTGAAGACGCTAAAT TERM 1621 1175154 - 1175169 + r 73 -10.4 -3.02144 | opp_overlap 1175152 AAGGATAAAAAAAGA GCCAGC GGGT GCTGGC TCTTGAAGACGCTAA asnS 1176586 - 1175186 - | asparaginyl tRNA synthetase TERM 1622 1175587 - 1175600 + g 76 -8.1 -4.15106 | AAGAGAGATCAACGC CCCAG TAAA CTGGG TTTTCAAACTTCCTG TERM 1623 1176746 - 1176729 - R 100 -9.1 -5.58209 | opp_overlap 1176726 TTAAAGGTAAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG pncB 1177957 - 1176755 - | nicotinate phosphoribosyltransferase TERM 1624 1180264 - 1180254 - g 72 -6.8 -4.19472 | GAAGATATTGCAAAA CGCA CTC TGCG TAATGCCTGCCTGCG TERM 1625 1180359 - 1180371 + G 78 -9.1 -3.86822 | AACAATATGACCGAT GCGCT GGC AGCGC TTTCTGCAGCGGTTG TERM 1626 1180765 - 1180753 - g 70 -4.7 -4.47328 | overlap 1180754 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAGCAGTTGAAAGG pepN 1178223 - 1180835 + | aminopeptidase N TERM 1627 1181412 - 1181402 - g 82 -2.4 -5.40072 | overlap 1181403 TCTCCTGGAAAAAAA GCGC CAG GAGC TGGAGAAAAAACGAA ECUMN_1127 1180914 - 1181444 + | transposase ORF A, IS1397 TERM 1628 1181725 - 1181713 - g 73 -9.1 -3.6761 | overlap 1181711 GCGCCTGAAGAAATA CCGGT CTT ACCGG GGAAATATGGGACTC TERM 1629 1182267 - 1182212 - g 82 -3.2 -5.22104 | gap 1, opp_overlap 1182213, overlap 1182213 1182214 1182216 CAAAAAAGAATAAAA CTCAGTCTTGGGGGACTCAGCCCGGTA GAA TACCGGACTGAGTATCAAAAAGCCG-G TTAACTGAAACTGTC ECUMN_1128 1181549 - 1182271 + | transposase ORF B, IS3 family, IS150 group ssuB 1183244 - 1182477 - | alkanesulfonate transporter subunit ; ATP-binding component of ABC superfamily ssuC 1184032 - 1183241 - | alkanesulfonate transporter subunit ; membrane component of ABC superfamily ssuD 1185189 - 1184044 - | alkanesulfonate monooxygenase, FMNH(2)-dependent ssuA 1186145 - 1185186 - | alkanesulfonate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1630 1185230 - 1185242 + g 77 -3.3 -5.03314 | GCTGCCAGATACGCT GGCGA ATA TCGAC TTTTTTCGGCATCAG TERM 1631 1185369 - 1185385 + g 70 -3.6 -4.59773 | overlap 1185381 AGAGGCAATCACCGG CGTTGG TAAGC CCATCG TTTTTGCCAGTAAAG ssuE 1186713 - 1186138 - | NAD(P)H-dependent FMN reductase TERM 1632 1187562 - 1187549 - g 72 -5.3 -4.47707 | CGCGATTAAAAATAA GCAAA ATGA TTTGC AAGCGATGCACCATA pyrD 1186950 - 1187960 + | dihydro-orotate oxidase, FMN-linked TERM 1633 1187982 - 1188025 + F 93 -13.5 -3.22448 | opp_overlap 1187992 1187993 1187995, overlap 1187989 1187993 CTTCGAATTCCTCTT TATAAGATAATCAGGGCTT TATTTT AAGCCCTGGTTGTTTTATA TTCATCGCTGTTGCT TERM 1634 1187989 - 1188018 + F 91 -9.4 -4.70583 | opp_overlap 1187992 1187993 1187995, overlap 1187982 1187993 TTCCTCTTTATAAGA TAATCAGGGCTT TATTTT AAGCCCTGGTTG TTTTATATTCATCGC TERM 1635 1187993 - 1188014 + F 74 -10.2 -3.25442 | opp_overlap 1187992 1187993 1187995, overlap 1187989 1187982 TCTTTATAAGATAAT CAGGGCTT TATTTT AAGCCCTG GTTGTTTTATATTCA TERM 1636 1188014 - 1187993 - f 72 -10.2 -2.84745 | opp_overlap 1187993 1187989 1187982, overlap 1187992 1187995 TCTTTATAAGATAAT CAGGGCTT TATTTT AAGCCCTG GTTGTTTTATATTCA ycbW 1188134 - 1188676 + | hypothetical protein ycbX 1189782 - 1188673 - | putative 2Fe-2S cluster-containing protein TERM 1637 1188855 - 1188871 + g 72 -8 -3.90922 | GATTTTCTAATTGCT CCAGCA ACACC TGCTGG TTATTTCCACGAAAT TERM 1638 1189263 - 1189280 + g 75 -5.5 -4.62069 | opp_overlap 1189254 1189255 CGGAAACCACCAGAT TGGGGCG GAAT TGCTCCA TTTTTACACTGGCCG ycbY 1190026 - 1192134 + | putative conserved AdoMet-dependent methyltransferase with RNA interaction domain uup 1192146 - 1194053 + | fused ATP-binding subunits of ABC superfamily protein involved in precise excision of transposons TERM 1639 1194127 - 1194099 - f 82 -8.9 -4.21936 | overlap 1194100 CTGACAACGGTAAAA TTGCCTGATGAAC TGG GTTAATCAGGCAT GAAAACCAACACTTT TERM 1640 1194126 - 1194100 - f 83 -12.4 -3.1268 | overlap 1194099 TGACAACGGTAAAAT TGCCTGATGAAC TGG GTTAATCAGGCA TGAAAACCAACACTT pqiA 1194183 - 1195436 + | paraquat-inducible membrane protein A TERM 1641 1196231 - 1196245 + G 70 -4.3 -4.58424 | GGCAGCCAGTGGCAC CGAAA ACAGC TTTCG TTTTGTATGATGATC pqiB 1195441 - 1197081 + | paraquat-inducible protein B ymbA 1197093 - 1197641 + | hypothetical protein TERM 1642 1197664 - 1197690 + F 100 -10.8 -6.02919 | opp_overlap 1197664 GATTTGTAAATATAA CCGTCTCCGGTA TGT TGCCTGAGGCGG TTTTTTTGTTTCTAA TERM 1643 1197830 - 1197856 + F 73 -3 -5.07652 | overlap 1197831 1197832 CGCGGTATTGCTTAA CTGTGATTGC ACATTTA GTAATCACTG TTTTCTTTTCCACCA rmf 1197897 - 1198064 + | ribosome modulation factor TERM 1644 1198079 - 1198109 + T 79 -8.2 -4.34345 | opp_overlap 1198082 1198086, overlap 1198081 1198086 ATTCTGTCTCTTTAA AAAGAAACCTCCGC ATT GCGGAGGTTTCGCC TTTTGATACTCTGTC TERM 1645 1198081 - 1198107 + T 93 -15.2 -2.51207 | opp_overlap 1198082 1198086, overlap 1198079 1198086 TCTGTCTCTTTAAAA AGAAACCTCCGC ATT GCGGAGGTTTCG CCTTTTGATACTCTG TERM 1646 1198106 - 1198082 - T 100 -18.7 -4.56597 | opp_overlap 1198081 1198079 1198086, overlap 1198086 CTGTCTCTTTAAAAA GAAACCTCCGC ATT GCGGAGGTTTC GCCTTTTGATACTCT TERM 1647 1198102 - 1198086 - T 100 -13.7 -4.85782 | opp_overlap 1198086 1198081 1198079, overlap 1198082 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA TERM 1648 1198086 - 1198102 + T 100 -13.7 -3.77484 | opp_overlap 1198082 1198086, overlap 1198081 1198079 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA fabA 1198652 - 1198134 - | beta-hydroxydecanoyl thioester dehydrase ycbZ 1200481 - 1198721 - | putative ATP-dependent protease ycbG 1200667 - 1201119 + | hypothetical protein TERM 1649 1201185 - 1201150 - T 95 -13.4 -3.36569 | opp_overlap 1201160, overlap 1201151 1201160 TCAATTTTCTAAAGA CGAAAAAAAACCCCGC AGCA GCGGGGTTTTTTACCA GACGAGAACTTAAGC TERM 1650 1201184 - 1201151 - T 89 -14.7 -2.6162 | opp_overlap 1201160, overlap 1201150 1201160 CAATTTTCTAAAGAC GAAAAAAAACCCCGC AGCA GCGGGGTTTTTTACC AGACGAGAACTTAAG TERM 1651 1201160 - 1201175 + T 100 -11.8 -5.00616 | opp_overlap 1201151 1201150 1201160 AAAGACGAAAAAAAA CCCCGC AGCA GCGGGG TTTTTTACCAGACGA TERM 1652 1201175 - 1201160 - T 100 -11.8 -5.9663 | opp_overlap 1201160, overlap 1201151 1201150 AAAGACGAAAAAAAA CCCCGC AGCA GCGGGG TTTTTTACCAGACGA ompA 1202235 - 1201195 - | outer membrane protein A (3a;II*;G;d) ECUMN_1147 1202389 - 1202607 + | hypothetical protein sulA 1203100 - 1202591 - | SOS cell division inhibitor yccR 1203319 - 1203948 + | hypothetical protein yccS 1206064 - 1203911 - | conserved hypothetical protein; putative inner membrane protein TERM 1653 1204808 - 1204797 - G 72 -4.4 -4.62441 | TGGCAGACAAACAAA CTTG TCAG CAAG ATCCAATACCCGTGA TERM 1654 1205218 - 1205193 - G 72 -8.3 -3.745 | gap 1, overlap 1205195 TGACGCAGCAAAATA CA-GCGTGACAG TTG CTGGCACGCCTG GCCCTGCATCGACAT TERM 1655 1205215 - 1205195 - G 78 -11.1 -3.45073 | overlap 1205193 ACGCAGCAAAATACA GCGTGACAG TTG CTGGCACGC CTGGCCCTGCATCGA yccF 1206529 - 1206083 - | conserved hypothetical protein; putative inner membrane protein TERM 1656 1206115 - 1206127 + g 71 -9.1 -3.52906 | overlap 1206112 GTGCATTGGCTTCAC GCGCA GCT TGCGC TGTTTCTACCGATAC TERM 1657 1206450 - 1206436 - G 75 -5 -4.74103 | GCGGTAAGGTAAAAA TCAGCA CAA TACTGA CCAGAGTCGCCAACA TERM 1658 1206962 - 1206974 + G 72 -7.7 -3.90112 | CGTCTGGTGTTTTAC TCCAG CAA CTGGA TTTGATTGCCACGCG helD 1206652 - 1208706 + | DNA helicase IV TERM 1659 1208730 - 1208711 - T 100 -13.6 -4.24711 | opp_overlap 1208707 1208704 GAAAACCGTAAGAAA CAGGTGGC GTTT GCCACCTG TGCAATATTACTTCA mgsA 1209196 - 1208738 - | methylglyoxal synthase TERM 1660 1209282 - 1209269 - R 86 -8.1 -4.7889 | overlap 1209271 AGAAAGACCGAAAAA GCCTG CGCA CAGGC ACAAAAATCTCAGGA yccT 1209954 - 1209292 - | hypothetical protein TERM 1661 1210305 - 1210287 - g 77 -8.8 -4.08064 | AAGTTGCCGGCAAAA CGCTGCTG GGC CAGCAGGG GTATGGCACGCTGGC yccU 1210127 - 1210540 + | putative CoA-binding protein TERM 1662 1210572 - 1210545 - T 100 -17.8 -5.63517 | opp_overlap 1210545 TGGCCAAATAAAAAA TCCCCGGAAGGC CAAA ACCTTCCGGGGA TTTGTTCAGGGATTA TERM 1663 1210545 - 1210572 + T 100 -17.1 -4.1673 | opp_overlap 1210545 TGGCCAAATAAAAAA TCCCCGGAAGG CCAAAA CCTTCCGGGGA TTTGTTCAGGGATTA yccV 1210902 - 1210585 - | DNA-binding protein, hemimethylated yccW 1212063 - 1210960 - | putative AdoMet-dependent methyltransferase, UPF0064 family TERM 1664 1211075 - 1211096 + gH 72 -5.9 -4.40358 | gap 1, opp_overlap 1211079, overlap 1211079 ACATCACGACCGGCA TCAATTGCGG CAT CCGCGAT-GA TTTTCTGAAATAAAT yccX 1212032 - 1212523 + | acylphosphatase tusE 1212849 - 1212520 - | subunit of enzyme for 2-thio modification of mnm5s2U of tRNA anticodon U TERM 1665 1212584 - 1212615 + g 91 -8 -5.06414 | opp_overlap 1212589 TTAGCCGGACCTTTC GGAAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCACCAAA TERM 1666 1212920 - 1212894 - R 95 -7.9 -5.46657 | overlap 1212898 CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTCGG TAAGTAACCCTGGGC TERM 1667 1212916 - 1212898 - R 100 -9.5 -5.20735 | overlap 1212894 GTAACAAAAAACAAA GCCCCGC ATAAA GCGAGGC TCGGTAAGTAACCCT yccA 1213599 - 1212940 - | conserved hypothetical protein; putative inner membrane protein TERM 1668 1213381 - 1213394 + g 70 -5.2 -4.42386 | GGAGATAATCCCGGT CGGC TTATTC GCCG TTTTATAGGTCAGGA TERM 1669 1213768 - 1213800 + r 79 -9.2 -3.90744 | opp_overlap 1213773, overlap 1213773 TTCGACAGGCAAAAG AAAAAGGGGTTAGC AGTTA GCTAACCCCTTATC TTATTTGGCGGAAGC TERM 1670 1213795 - 1213773 - R 100 -13.5 -5.48213 | opp_overlap 1213768 1213773 CAGGCAAAAGAAAAA GGGGTTAGC AGTTA GCTAACCCC TTATCTTATTTGGCG TERM 1671 1213773 - 1213795 + r 100 -13.5 -3.90464 | opp_overlap 1213773, overlap 1213768 CAGGCAAAAGAAAAA GGGGTTAGC AGTTA GCTAACCCC TTATCTTATTTGGCG ECUMN_1161 1213977 - 1213801 - | hypothetical protein TERM 1672 1215290 - 1215302 + G 71 -9.1 -3.54459 | overlap 1215296 1215298 GTACTCATTCCACCG CCGAC ACC GTCGG TTTAACCGCGCTTGG hyaA 1214320 - 1215438 + | hydrogenase 1, small subunit TERM 1673 1216646 - 1216632 - g 88 -11.4 -3.72893 | TACTCGTGGATCAAA GCGCCA CGC TGGCGC GGTAACGCGATGGAA hyaB 1215435 - 1217228 + | hydrogenase 1, large subunit hyaC 1217247 - 1217954 + | hydrogenase 1, b-type cytochrome subunit hyaD 1217951 - 1218538 + | protein involved in processing of HyaA and HyaB proteins hyaE 1218535 - 1218933 + | protein involved in processing of HyaA and HyaB proteins TERM 1674 1219509 - 1219529 + G 100 -9.7 -5.37043 | opp_overlap 1219506 1219509 AATCTGACGCAATTA CCTATCAGC GAG GCTGATCGG TTTTTTCTCTCACGT hyaF 1218930 - 1219787 + | protein involved in nickel incorporation into hydrogenase-1 proteins TERM 1675 1220358 - 1220393 + G 70 -5.4 -4.34402 | gap 1, opp_overlap 1220358 GTTGTGGATATTGAA TGC-CAACGGTTGGATG CAA TACCCGACCGGTGCGCA TTTTGATATCGACAC TERM 1676 1220424 - 1220445 + G 78 -10.9 -3.54424 | opp_overlap 1220423 1220424 1220426 CCTTCGTATGGAAAT GACCAGCTT CAGC GAGCTGGTC TTTAACCCGGTCAGC TERM 1677 1220837 - 1220827 - g 77 -8.2 -4.0942 | CACTCATTAGATAAA CCCG TGC CGGG TCTGAAGAATTTGAT appC 1219921 - 1221465 + | cytochrome bd-II oxidase, subunit I appB 1221477 - 1222613 + | cytochrome bd-II oxidase, subunit II TERM 1678 1222759 - 1222728 - f 95 -14.4 -3.24166 | overlap 1222723 AGTTAACGAACGTAA GCCTGATGAGGCGC ATTA GCGTCGCATCAGGC AATCAATAATGTCAG TERM 1679 1223166 - 1223152 - g 77 -10 -3.65542 | overlap 1223150 CGTACCCGTAAAACA GGCGAA GCC TTCGCC GCCGGGCTGGCACCT TERM 1680 1223265 - 1223252 - g 72 -4.5 -4.59853 | overlap 1223253 TTAATCCTCTAAAAA CTGGC GTTT GCCAA CTGGATAACGCGAAC appA 1222810 - 1224108 + | phosphoanhydride phosphorylase cspH 1224308 - 1224096 - | stress protein, member of the CspA-family cspG 1224594 - 1224806 + | DNA-binding transcriptional regulator TERM 1681 1225027 - 1225011 - f 70 -9.4 -2.95962 | opp_overlap 1225011, overlap 1225008 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCAGCC TERM 1682 1225011 - 1225027 + F 100 -9.4 -5.36441 | opp_overlap 1225011 1225008 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCAGCC gnsA 1225200 - 1225373 + | putative regulator of phosphatidylethanolamine synthesis TERM 1683 1225378 - 1225410 + T 71 -7.8 -3.79909 | gap 1, opp_overlap 1225370 1225385, overlap 1225377 AAATAATGTGATTTT GT-GAACATCACCCC GTGC GAGGTGATGTTCCGC TTGTTGCTAATTTAG yccM 1226495 - 1225422 - | putative 4Fe-4S membrane protein TERM 1684 1226458 - 1226479 + g 100 -2.9 -5.71712 | gap 1, overlap 1226462 1226463 CCGCCCGTCGTGCCT GGCCGCCGCT GCC AGCGG-GTTC TTTTTTTCTCTGCCA TERM 1685 1226462 - 1226476 + g 80 -5.6 -4.92669 | overlap 1226458 1226463 CCGTCGTGCCTGGCC GCCGCT GCC AGCGGG TTCTTTTTTTCTCTG TERM 1686 1226463 - 1226475 + g 71 -9.1 -3.53161 | overlap 1226462 1226458 CGTCGTGCCTGGCCG CCGCT GCC AGCGG GTTCTTTTTTTCTCT torS 1229430 - 1226578 - | hybrid sensory histidine kinase in two-component regulatory system with TorR TERM 1687 1227485 - 1227466 - GH 70 -6.4 -4.20918 | opp_overlap 1227466 1227465 GCTAACCTGAACAAA TGGCTGGA AGAT TTCAGCCA GTTTCGTGGGATCAA TERM 1688 1229518 - 1229540 + Gr 72 -7.6 -3.86346 | opp_overlap 1229519, overlap 1229519 GCCGCTTAAAGCCAA ACGCGCATGG AAA CTGTGCGCGC TTTATCCCAGCCTGA TERM 1689 1229519 - 1229539 + Gr 75 -11.1 -2.91593 | opp_overlap 1229519, overlap 1229518 CCGCTTAAAGCCAAA CGCGCATGG AAA CTGTGCGCG CTTTATCCCAGCCTG TERM 1690 1230054 - 1230024 - gR 72 -8.2 -3.7456 | overlap 1230048 ATAACGATATTGAAA TCCAGCGTAACCTG TTG CAGGAGATGCTGGA GCGCCATCCAGAAAT TERM 1691 1230281 - 1230308 + Gr 72 -5.6 -4.48987 | gap 1 CAATTACAGGGGCAA TCGGT-GTCTGAT AAT GTCAGCCCACCGA TTTTAGTTCTGACGC torT 1229393 - 1230421 + | periplasmic sensory protein associated with the TorRS two-component regulatory system torR 1231086 - 1230394 - | DNA-binding response regulator in two-component regulatory system with TorS torC 1231216 - 1232388 + | trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit TERM 1692 1232750 - 1232761 + G 72 -5.8 -4.38712 | CGACACCTCCCAGCG CGGT GATA ACCG TTTTGTGCGCGTGAG TERM 1693 1233163 - 1233153 - g 72 -6.8 -4.21908 | overlap 1233160 TACGAGCAGCTAAAA GCGA AAG TCGC CGCCGGTGAAATTGA torA 1232388 - 1234934 + | trimethylamine N-oxide (TMAO) reductase I, catalytic subunit TERM 1694 1235090 - 1235072 - g 89 -13.1 -3.36823 | overlap 1235067 TTGCTGAAAAGTGAA CCGCCGC TCACT GCGGCGG TGAATGAGCTGGAAA torD 1234931 - 1235530 + | chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I TERM 1695 1235644 - 1235674 + T 86 -14 -2.73364 | opp_overlap 1235642 1235641 1235649, overlap 1235650 ATGAGCTACAAACCG GGAAAGCCGCTGGC GCA GCAGGCGGTTTTCC TGCTTCAGGTGCGCA cbpM 1235928 - 1235623 - | modulator of CbpA co-chaperone TERM 1696 1235650 - 1235668 + g 78 -8 -4.3534 | opp_overlap 1235649 1235642 1235641, overlap 1235644 TACAAACCGGGAAAG CCGCTGGC GCA GCAGGCGG TTTTCCTGCTTCAGG cbpA 1236848 - 1235928 - | curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK TERM 1697 1236048 - 1236062 + g 86 -6.4 -5.14563 | overlap 1236057 TTTCAGTACCGCATA CAGATC GCC GGTCTG TTTTTTGCTCACCAG TERM 1698 1236568 - 1236548 - G 72 -6.9 -4.18494 | overlap 1236563 CATGCTGACCGAAAA TTGACGAGA AGA TATCGTCAA AATCTTCGGCGTTAA TERM 1699 1237227 - 1237238 + G 75 -4.4 -4.73635 | opp_overlap 1237227, overlap 1237222 CACGCTTTTTGAAAA CACA CTTG TGTG TTTTATTCAGTTGTA yccE 1237108 - 1238364 + | hypothetical protein TERM 1700 1238508 - 1238536 + F 91 -10.3 -4.61633 | opp_overlap 1238510 GAGGCAGGGGCTAAT CAGGCATAGTTTG CGT CAAACCTTGCCTG TTTTTGAAGATGTAT TERM 1701 1239097 - 1239081 - g 87 -4.3 -5.19212 | ATCACCAGGAAAAAA TGGGCAC TAT GGACCCA ACCTTTAACCCAGTG agp 1238657 - 1239898 + | glucose-1-phosphatase/inositol phosphatase TERM 1702 1239928 - 1239906 - T 100 -16.3 -4.84673 | opp_overlap 1239901 TGAAATAACAGAAAA CTCCCCCGC GTGAA GCGGGGGAG TCGCGTATTAAACGT yccJ 1240163 - 1239936 - | hypothetical protein wrbA 1240780 - 1240184 - | putative conserved flavoprotein TERM 1703 1241035 - 1241050 + GH 79 -11.8 -2.55015 | opp_overlap 1241035, overlap 1241030 CAGGATATTACTAAA CGCGGG TCTG CCCGCG TCAGTTCACTAAGCT TERM 1704 1241050 - 1241035 - gH 93 -11.8 -3.82665 | opp_overlap 1241035 1241030 CAGGATATTACTAAA CGCGGG TCTG CCCGCG TCAGTTCACTAAGCT TERM 1705 1241100 - 1241085 - gH 76 -7.6 -4.19817 | opp_overlap 1241092 CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTAATTCT ECUMN_1187 1240984 - 1241220 + | hypothetical protein ymdF 1241153 - 1241326 + | hypothetical protein TERM 1706 1241382 - 1241400 + T 100 -13.1 -4.84918 | opp_overlap 1241379 GTCAAAAAGTCATCA CCGCCGG TTACC CCGGCGG TTTTCTATTTATGGC rutG 1242851 - 1241415 - | pyrimidine transporter rutF 1243252 - 1242758 - | flavin:NADH oxidoreductase subunit of alternative pyrimidine degradation pathway rutE 1243853 - 1243263 - | oxidoreductase subunit of the alternative pyrimidine degradation pathway TERM 1707 1243447 - 1243410 - G 100 -14.1 -3.57144 | gap 1 GTGTTGACGGTCAAA GCCGGACA-TCGGGCCGG TAT CCAGCCCCAGCGCCCGGC AGGCGACGATCAGAT rutD 1244689 - 1243850 - | enzyme of the alternative pyrimidine degradation pathway rutC 1245056 - 1244670 - | enzyme of the alternative pyrimidine degradation pathway rutB 1245760 - 1245068 - | enzyme of the alternative pyrimidine degradation pathway TERM 1708 1245274 - 1245239 - G 87 -4.6 -5.26918 | gap 1, opp_overlap 1245246, overlap 1245240 ATACTCCAGAAAAAA GCCATCGCGTAGCGTCG ATT CGACGC-AGACGTTGGT AGCGATACCGGTGAA rutA 1246908 - 1245760 - | monooxygenase of the alternative pyrimidine degradation pathway TERM 1709 1247215 - 1247202 - g 82 -2.3 -5.45652 | AGCGCGAAGAAAAAA GCGAT TCTT AGCGC AGCACTGGACACTTT TERM 1710 1247607 - 1247562 - g 74 -8.3 -3.99405 | gap 1, opp_overlap 1247562 TTAATTGATGAGAAA TCGGCGC-TGATTGCCGGTT GGGTCAA AAGCGGCAAACTCGCGCCGA TTGACCCGCAGCATT rutR 1247139 - 1247777 + | DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway TERM 1711 1247812 - 1247779 - T 100 -15.3 -3.62096 | opp_overlap 1247782, overlap 1247782 TTCGACCACGTTAAA GATGCCGGAGGAGGT TGTA ACATCCTCCGGCTTC CTGCTTAACCGATCG TERM 1712 1247809 - 1247782 - T 93 -15.6 -2.63089 | opp_overlap 1247782, overlap 1247779 GACCACGTTAAAGAT GCCGGAGGAGGT TGTA ACATCCTCCGGC TTCCTGCTTAACCGA TERM 1713 1247782 - 1247809 + T 100 -15.6 -3.27298 | opp_overlap 1247782 1247779 GACCACGTTAAAGAT GCCGGAGGAGGT TGTA ACATCCTCCGGC TTCCTGCTTAACCGA TERM 1714 1247851 - 1247836 - T 80 -10.4 -3.73775 | opp_overlap 1247845 CCGATCGTCATTAAA CTGGCG TTAC CGCCAG CGGCAGCGGTATTCA putA 1251779 - 1247817 - | fused DNA-binding transcriptional regulator ; proline dehydrogenase ; pyrroline-5-carboxylate dehydrogenase TERM 1715 1249833 - 1249847 + g 75 -5.7 -4.62336 | CGGTTGTTCCAGCAT TGGCA AGGCC TGCCA TTTTTGCAGTGCACT putP 1252202 - 1253710 + | proline:sodium symporter ECUMN_1199 1255201 - 1253858 - | hypothetical protein ECUMN_1200 1256356 - 1256210 - | hypothetical protein efeU 1256383 - 1257222 + | ferrous iron permease TERM 1716 1257800 - 1257790 - g 71 -3.2 -4.78661 | ATCGAAAAAGCAAAA GCAC TGT ATGC GCCGACGCGCCAGCA TERM 1717 1258232 - 1258213 - g 72 -5 -4.6902 | CCACAACTGCAAAAA GCCAAC CCGGAACT GTTGGC AAAAGTCGATGCCAA efeO 1257280 - 1258407 + | ferrous iron transport binding protein TERM 1718 1258456 - 1258433 - g 90 -9.6 -4.44797 | opp_overlap 1258431 1258447, overlap 1258447 GTATGAAGATGAAAA CGGCGTGA ATGAACCG TCACGCCG ACGTTTACTGAAAGG TERM 1719 1258535 - 1258525 - g 82 -3.2 -5.28176 | overlap 1258531 CTCATGCACAAAAAA CGCA AAG TGCA CCGGGGACGCTTTCA TERM 1720 1258560 - 1258531 - g 77 -8.6 -4.08285 | gap 1, overlap 1258525 CACAAAAAACGCAAA GTGCA-CCGGGGA CGCTT TCACCGGATGCAC GCAATGAGAAGCAGC efeB 1258413 - 1259684 + | heme-binding periplasmic protein involved in iron transport; Tat-dependent exported TERM 1721 1259781 - 1259818 + T 72 -7.5 -4.08216 | opp_overlap 1259794 AATCGGTGCGGGTCG GTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCAAGC TTTTACCAGCCCTGC ECUMN_1204 1259954 - 1259799 - | hypothetical protein TERM 1722 1260259 - 1260276 + G 70 -10.5 -2.80816 | opp_overlap 1260259 1260258 GTTCGTGCGCATAAT CGCGCTG CCAA CGGCGCG TGTGATGAATACAAA TERM 1723 1261083 - 1261050 - g 82 -13.3 -2.84504 | gap 1, overlap 1261047 1261045 ATTCGGTAAAGAGGA TTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTA CATGCATACAGTTAA phoH 1260034 - 1261098 + | putative phosphate starvation-inducible protein with ATPase activity TERM 1724 1261113 - 1261137 + F 100 -13.6 -4.99947 | AGTGTATTATCGGCG CAGAGCCCGG GCGAA CCGGGCTTTG TTTTATTTCATTAAC TERM 1725 1261482 - 1261495 + F 73 -2.5 -5.11613 | ATTAAAAATATAAGG TTAAT CTTA ATTAA TTTTTTGGCTAATAT ECUMN_1206 1261685 - 1262371 + | conserved hypothetical protein; putative exported protein TERM 1726 1262451 - 1262432 - f 100 -10 -6.19443 | opp_overlap 1262432 1262430 TATACGAAAAAAAAA GCCCGTAC CTCC GTACGAGC TCTTCTTTAAAGATG ycdW 1262786 - 1263724 + | 2-ketoacid reductase ycdX 1263779 - 1264516 + | putative PHP hydrolase ycdY 1264540 - 1265094 + | hypothetical protein TERM 1727 1265633 - 1265615 - g 71 -2.2 -4.88407 | overlap 1265617 TTACGCAATGAAAAA CAGCGGCC TGT GGCTGGCG GCGCGTAGTACGAAG ycdZ 1265196 - 1265687 + | conserved hypothetical protein; putative inner membrane protein TERM 1728 1265704 - 1265678 - T 77 -5.2 -5.01811 | opp_overlap 1265682, overlap 1265682 GCAGCAAATCAAAAA TAAAGCGTGA CGGGCAC TCACGCTTTC GCTTAAACAGTAAAA TERM 1729 1265700 - 1265682 - T 81 -6 -5.00388 | opp_overlap 1265682, overlap 1265678 CAAATCAAAAATAAA GCGTGA CGGGCAC TCACGC TTTCGCTTAAACAGT TERM 1730 1265720 - 1265740 + T 91 -8.3 -5.03994 | opp_overlap 1265715 1265720 GCTTAAACAGTAAAA TGCCGGA TGATAAT TCCGGCA TTTTTATCTATCAGG TERM 1731 1265740 - 1265720 - T 87 -8.3 -4.49756 | opp_overlap 1265720, overlap 1265715 GCTTAAACAGTAAAA TGCCGGA TGATAAT TCCGGCA TTTTTATCTATCAGG csgG 1266584 - 1265751 - | putative outer membrane lipoprotein involved in curli production assembly/transport TERM 1732 1265789 - 1265813 + g 70 -3.5 -4.65933 | opp_overlap 1265776, overlap 1265787 1265790 TATGGCGGTATTTCA CCAGAATGTCA TTC TGCCGTTCTGC TTTATTTTGCAAATC TERM 1733 1266221 - 1266234 + g 75 -4.5 -4.77165 | opp_overlap 1266221, overlap 1266222 GGATTCGGTTATTAA TGGCA ACCG TGCCG TTTTCTTGTGCCGCA TERM 1734 1266477 - 1266434 - G 85 -11.8 -3.70902 | opp_overlap 1266438, overlap 1266438 TGTTGTATACCGAAA CAAAGATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATCTTTG TAGCTCTGAGCACGA TERM 1735 1266473 - 1266438 - G 77 -6.8 -4.48299 | opp_overlap 1266438, overlap 1266434 GTATACCGAAACAAA GATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATC TTTGTAGCTCTGAGC csgF 1267027 - 1266611 - | putative transport/assembly protein for curli synthesis csgE 1267441 - 1267052 - | putative transport/assembly protein for curli synthesis csgD 1268096 - 1267446 - | DNA-binding transcriptional activator in two-component regulatory system TERM 1736 1267839 - 1267860 + g 93 -8.9 -4.77036 | opp_overlap 1267842 TTCAGGCGTATTTAG CAACAATAT TTTG ATATTGTTG TTTTTCCTGCTCAAA TERM 1737 1268646 - 1268632 - H 73 -2.9 -5.11836 | AGATTTAAAAGAAAA CAAAA TATTT TTTTG CGTAGATAACAGCGT csgB 1268851 - 1269306 + | curlin nucleator protein, minor subunit in curli complex csgA 1269347 - 1269802 + | cryptic curlin major subunit TERM 1738 1269840 - 1269825 - gf 93 -10.4 -4.49556 | opp_overlap 1269825 TCTGTATTAAAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA TERM 1739 1269825 - 1269840 + GF 100 -10.4 -5.75342 | opp_overlap 1269825 TCTGTATTAAAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA csgC 1269702 - 1270193 + | putative curli production protein ymdA 1270314 - 1270625 + | hypothetical protein ymdB 1270720 - 1271253 + | hypothetical protein TERM 1740 1271303 - 1271315 + G 78 -5.5 -4.8048 | TGTTCGCAACATCCC GGTCA GTG TGGCC TTTTTCCTCTGGAGA TERM 1741 1272632 - 1272602 - g 100 -11.8 -5.00884 | opp_overlap 1272605, overlap 1272590 1272605 ATTGTTCTCAAAAAA GAACCCGCCACCAG TTT CTGGAAGCGGGTTA TGGTCAGACTGGCAT TERM 1742 1272605 - 1272629 + G 80 -11.3 -3.41051 | opp_overlap 1272605 1272602 GTTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG TERM 1743 1272629 - 1272605 - g 100 -13.5 -4.61482 | opp_overlap 1272605, overlap 1272602 GTTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG ymdC 1271255 - 1272676 + | putative hydrolase mdoC 1273841 - 1272684 - | membrane protein required for modification of periplasmic glucan TERM 1744 1273321 - 1273298 - G 100 -3.2 -5.64274 | gap 1, overlap 1273301 1273302 CGAGGCACAAAAAAA TCACCGATAGT TTT ACCATCGA-GA ATTTTTTATTCGTTT ECUMN_1222 1274029 - 1273886 - | hypothetical protein ECUMN_1223 1274191 - 1274033 - | hypothetical protein TERM 1745 1274679 - 1274669 - g 88 -5.4 -5.22289 | CAGCAAAGATAAAAA CGAT GAA ATCG TCAGCATGCTCGGGG mdoG 1274235 - 1275770 + | glucan biosynthesis protein, periplasmic mdoH 1275763 - 1278306 + | glucan biosynthesis: glycosyl transferase TERM 1746 1278331 - 1278310 - f 79 -5.2 -5.06414 | gap 1, opp_overlap 1278310 GCTTCGCAATAAAAA CGTAGTTGC CTGAT GCA-CTACG CTTATCGGGCCTACA TERM 1747 1278461 - 1278431 - f 81 -11.3 -3.18094 | opp_overlap 1278437, overlap 1278437 AAAACAACGAGCCAA TAAAAATACCGGC GTTAT GCCGGTATTTTTT TACGGAAGAGGTATC TERM 1748 1278455 - 1278437 - f 93 -10.3 -5.11063 | opp_overlap 1278437, overlap 1278431 ACGAGCCAATAAAAA TACCGGC GTTAT GCCGGTA TTTTTTTACGGAAGA TERM 1749 1278437 - 1278455 + F 100 -11 -5.40072 | opp_overlap 1278437 1278431 ACGAGCCAATAAAAA TACCGGCG TTA TGCCGGTA TTTTTTTACGGAAGA yceK 1278479 - 1278706 + | putative lipoprotein msyB 1279081 - 1278707 - | hypothetical protein mdtG 1280390 - 1279164 - | putative metabolite efflux transporter lpxL 1281482 - 1280562 - | lauryl-acyl carrier protein (ACP)-dependent acyltransferase TERM 1750 1280950 - 1280960 + g 70 -5.4 -4.41348 | TTTAAATCTTTGCGG TCGA GCA TCGA TTTATTTGAGCGCAA TERM 1751 1281301 - 1281323 + g 72 -8.4 -3.73224 | CACAGTTCCAGGTTG CGATGCACAA TTT TTGCGCGTCG TTTCATAAAACGTAA TERM 1752 1281762 - 1281749 - g 70 -6.7 -4.10429 | overlap 1281757 AACGACGCGTTAAAA GCCAA AATG TTGGC TGAGAGCGAACCGCG yceA 1281707 - 1282759 + | hypothetical protein TERM 1753 1282793 - 1282763 - T 75 -8.3 -3.72494 | opp_overlap 1282764 1282765, overlap 1282752 1282761 1282766 CCAACGGAATAAATA TCATTGCCGGATG CGTGC CATCCGGCAACAT TTCACTCTTACTTCT TERM 1754 1282765 - 1282791 + T 75 -10.9 -2.86618 | opp_overlap 1282752 1282763 1282761 1282766, overlap 1282764 AACGGAATAAATATC ATTGCCGGATG CGTGC CATCCGGCAAC ATTTCACTCTTACTT TERM 1755 1282790 - 1282766 - T 89 -14.4 -2.94962 | opp_overlap 1282765 1282764, overlap 1282752 1282763 1282761 ACGGAATAAATATCA TTGCCGGATG CGTGC CATCCGGCAA CATTTCACTCTTACT yceI 1283376 - 1282801 - | polyprenyl-pyrophosphate binding protein yceJ 1283946 - 1283380 - | putative cytochrome b561 TERM 1756 1283527 - 1283513 - G 75 -5.6 -4.66609 | overlap 1283514 CACGCGAGCCAAAAA TGCAGG GCA CCGGCA AAGTCAGCCTGTGCG TERM 1757 1284279 - 1284269 - R 74 -5.4 -4.62163 | AGAGAAAAAGATAAA GCAT CAG ATGC TCGCGAATATTATTG TERM 1758 1284358 - 1284339 - R 93 -10.7 -4.57837 | opp_overlap 1284344 ATACTCCTGTAAAAA CGGCCTC ATTCTG GAGGCCG TAATGATGATTATTG solA 1285486 - 1284368 - | N-methyltryptophan oxidase, FAD-binding TERM 1759 1285471 - 1285485 + g 100 -3.6 -5.76633 | CGCTGCCAATAATGA TGAGAT CGT ATTTCA TTTTTTTCTCTCTGC TERM 1760 1285560 - 1285576 + r 84 -9.4 -4.20084 | opp_overlap 1285554 1285560 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT TERM 1761 1285576 - 1285560 - R 79 -9.4 -3.74347 | opp_overlap 1285560, overlap 1285554 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT bssS 1285855 - 1285601 - | biofilm regulator TERM 1762 1285830 - 1285841 + g 71 -3 -4.8236 | ACGAGCGGATGAGTC TGAA TGAC TTCA TTATTTTTTTCCATC TERM 1763 1286123 - 1286108 - R 100 -11.8 -5.85244 | AAGTAAAATAAAAAA GCCGGG GCGA CCCGGC AAAAACAAAAATCAC dinI 1286390 - 1286145 - | DNA damage-inducible protein I pyrC 1287510 - 1286464 - | dihydro-orotase TERM 1764 1287609 - 1287594 - R 100 -11.8 -4.91852 | opp_overlap 1287591 TGCACGAAAAATAAA GGGCGC GAAT GCGCCC TCGTGATTAATCCGT yceB 1288176 - 1287616 - | putative lipoprotein TERM 1765 1288307 - 1288261 - R 80 -4.3 -5.31275 | gap 1, overlap 1288268 1288270 CGCCAGCAGAAAAAA CTGA-AAACGGCGGCAACCCGC GAAT ACAGGCTGCCGCGGCGGGTCAG GATTAAATCGCCATT TERM 1766 1288299 - 1288268 - R 100 -12.2 -4.55016 | overlap 1288261 1288270 AGAAAAAACTGAAAA CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG CGGGTCAGGATTAAA TERM 1767 1288297 - 1288270 - R 84 -13.4 -2.56715 | overlap 1288268 1288261 AAAAAACTGAAAACG GCGGCAACCCGC GAAT ACAGGCTGCCGC GGCGGGTCAGGATTA grxB 1288957 - 1288310 - | glutaredoxin 2 (Grx2) mdtH 1290229 - 1289021 - | putative metabolite efflux permease TERM 1768 1289046 - 1289056 + g 74 -8.2 -3.92373 | opp_overlap 1289043 1289046, overlap 1289025 CGTTCCAGCAAACGA CGCG CGG CGCG TTTCTGGCTAAACTG TERM 1769 1289732 - 1289716 - G 91 -7.9 -5.03227 | ACAGCACAAACAAAA CTGCCCC TGT GGCGCAG ACCAGGCGAAAGTCG TERM 1770 1289845 - 1289826 - G 87 -4.9 -5.30686 | opp_overlap 1289825 AACAGCGAGAAAAAA CGACCAC GCTGTT GTGGACG GATTAGTTTCACCAC TERM 1771 1290730 - 1290742 + G 84 -7.7 -4.67556 | opp_overlap 1290730 ACGAAAAAGAGATTA TTGGC GTT GCCAA TTTTTCCAATGTTGT rimJ 1290465 - 1291049 + | ribosomal-protein-S5-alanine N-acetyltransferase yceH 1291060 - 1291707 + | hypothetical protein mviM 1291709 - 1292632 + | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 1772 1292695 - 1292711 + F 100 -13.7 -4.11692 | ATTCGCCTCTTTCAG CGCCTGC CTT GCAGGCG TTTTGCCCGTGGGTC mviN 1292742 - 1294277 + | conserved hypothetical protein; putative inner membrane protein TERM 1773 1294313 - 1294281 - T 72 -8.6 -3.62597 | opp_overlap 1294281 1294284, overlap 1294282 1294285 CGGACGGTGTAACAA TGCAT-TCCGGCCTGC AGT GCAGGCCGGAGATA-A TCTTCAGATCGAAAT TERM 1774 1294313 - 1294282 - T 71 -10.2 -2.77344 | gap 1, opp_overlap 1294281 1294284, overlap 1294281 1294285 GGACGGTGTAACAAT GCAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TCTTCAGATCGAAAT TERM 1775 1294284 - 1294310 + T 87 -14.4 -2.75074 | opp_overlap 1294281 1294282 1294285, overlap 1294281 ACGGTGTAACAATGC ATTCCGGCCTGC AGT GCAGGCCGGAGA TAATCTTCAGATCGA TERM 1776 1294309 - 1294285 - T 93 -15.7 -2.6563 | opp_overlap 1294284 1294281, overlap 1294281 1294282 CGGTGTAACAATGCA TTCCGGCCTGC AGT GCAGGCCGGAG ATAATCTTCAGATCG flgN 1294733 - 1294317 - | export chaperone for FlgK and FlgL flgM 1295031 - 1294738 - | anti-sigma factor for FliA (sigma 28) TERM 1777 1294775 - 1294802 + g 73 -4 -4.86621 | overlap 1294776 1294779 TGCGCTTCGTTGATC AGCGCATCGGCA ATTT TGCCGGTGTCCA TTTTTAGTTCACCGT flgA 1295766 - 1295107 - | assembly protein for flagellar basal-body periplasmic P ring TERM 1778 1295707 - 1295677 - G 76 -3.8 -5.00616 | CTGGGCGCTAAAAAA GGTGTGCAATTGCG ATG CGAGATTGCTCGCC GCACTTAACGGACTG TERM 1779 1295980 - 1295962 - g 72 -10.2 -3.38991 | overlap 1295960 ACGTTTTCAACAAGA GGCGCTCA ATC TGCGCGCC CAGCGTCAGGAAGTG flgB 1295921 - 1296337 + | flagellar component of cell-proximal portion of basal-body rod TERM 1780 1296367 - 1296379 + G 72 -10.5 -3.05816 | GAATATTTTTGATAT CGCCG GGT CGGCG TTAACTGCCCAGTCC flgC 1296341 - 1296745 + | flagellar component of cell-proximal portion of basal-body rod TERM 1781 1297204 - 1297185 - g 80 -5.6 -4.88736 | opp_overlap 1297185 CATCACCGATAAAAA TGGCGCGG TTGT CCGTACCA TTGATATTGGTGAAC flgD 1296757 - 1297452 + | flagellar hook assembly protein TERM 1782 1298408 - 1298396 - g 70 -5.5 -4.32951 | opp_overlap 1298400 1298401, overlap 1298401 ATTCCAACGAACAAA CCCAA CTG CTGGG GCAGATTGTACTGGC flgE 1297477 - 1298682 + | flagellar hook protein TERM 1783 1298770 - 1298758 - g 74 -10.5 -3.24329 | opp_overlap 1298756, overlap 1298756 GACGTTGAATCAACA GGCGG TAA CCGCC AGTAATCTGGCCAAT flgF 1298702 - 1299457 + | flagellar component of cell-proximal portion of basal-body rod flgG 1299594 - 1300376 + | flagellar component of cell-distal portion of basal-body rod TERM 1784 1300384 - 1300402 + F 72 -8.1 -3.96337 | opp_overlap 1300384 AACTCTAAGGCATAA CCGGTGG CAGAT TCACCGG TTTACTGATTTTTGA flgH 1300429 - 1301127 + | flagellar protein of basal-body outer-membrane L ring flgI 1301139 - 1302236 + | flagellar basal body P-ring protein flgJ 1302236 - 1303177 + | muramidase TERM 1785 1304551 - 1304540 - g 72 -5.8 -4.30014 | overlap 1304533 CCGACGAAGCGAAAA TCGC CATG GCGA GCGCAGAAGATGCGG flgK 1303243 - 1304886 + | flagellar hook-filament junction protein 1 TERM 1786 1305579 - 1305568 - g 77 -7.2 -4.56969 | overlap 1305555 1305569 1305570 AAGCGGATAAAGAAA CCGC CGCT GCGG CACTGGATAAAACCA flgL 1304898 - 1305851 + | flagellar hook-filament junction protein TERM 1787 1305893 - 1305921 + T 100 -12.4 -5.47218 | TGGGTATGTTTTCTC TGCCTGCTCTGG GATCG CCGGGGCGGGCA TTTTTTTGCATGAGA ECUMN_1258 1306455 - 1305946 - | hypothetical protein ECUMN_1259 1306775 - 1306437 - | hypothetical protein TERM 1788 1306842 - 1306823 - R 100 -11.4 -5.63517 | opp_overlap 1306823 CCCTGAAATAAAAAA GCCCTGGC AGTT ACCAGGGC TTGATTACTTGAGCT TERM 1789 1306823 - 1306842 + r 81 -10.7 -3.45634 | opp_overlap 1306823 CCCTGAAATAAAAAA GCCCTGG CAGTTA CCAGGGC TTGATTACTTGAGCT rne 1310048 - 1306863 - | fused ribonucleaseE: endoribonuclease ; RNA-binding protein ;RNA degradosome binding protein TERM 1790 1307771 - 1307806 + g 78 -8.3 -4.15044 | gap 1, overlap 1307760 GTTCTGTGCGTGGAG CTGGCGCTTCCTGAAC AATTG GTTC-GGCAGCGACAG TTTCTTCAACCACCG TERM 1791 1309446 - 1309460 + g 88 -5.6 -5.18357 | CAGGAACGGAGCCGG GCGGCT TTC AGCGGC TTTTTTGATGGCTTC rluC 1310621 - 1311580 + | 23S rRNA pseudouridylate synthase TERM 1792 1311677 - 1311622 - T 100 -15.4 -3.28712 | opp_overlap 1311613 1311612, overlap 1311604 1311603 1311623 CGGTTGGCCTGATAA GGCGTTTACGCCGCATCAGGCTGCCA GCAC CGATTGCCGGATGCGACGTAAACGCA TCCGGCGCAAACAAC TERM 1793 1311676 - 1311623 - T 100 -18.9 -2.57132 | opp_overlap 1311613 1311612, overlap 1311604 1311603 1311622 GGTTGGCCTGATAAG GCGTTTACGCCGCATCAGGCTGCCA GCAC CGATTGCCGGATGCGACGTAAACGC ATCCGGCGCAAACAA yceF 1312276 - 1311692 - | hypothetical protein TERM 1794 1312413 - 1312429 + H 77 -3.6 -5.31519 | opp_overlap 1312413, overlap 1312407 GAATTATTGGCAAAA GGCAAC CACAT GCTGCC TTTTTCTTTGACTCT yceD 1312475 - 1312996 + | hypothetical protein rpmF 1313048 - 1313221 + | 50S ribosomal subunit protein L32 TERM 1795 1313237 - 1313222 - f 71 -9 -3.34895 | opp_overlap 1313208 GTCATCGCTAAGTAA TCACGC GTCT GCGTGA TGAAGCTTAGTGAGG TERM 1796 1313358 - 1313387 + G 78 -10.7 -3.51032 | overlap 1313359 1313362 TTTTGGCCCTTCCGT GACAGTGCCTGCA GCAT TGCAGGCACTGAA TTCTAATTCGCAACT TERM 1797 1313359 - 1313386 + G 85 -14.2 -2.70298 | overlap 1313358 1313362 TTTGGCCCTTCCGTG ACAGTGCCTGCA GCAT TGCAGGCACTGA ATTCTAATTCGCAAC TERM 1798 1313362 - 1313383 + G 90 -14.5 -2.63347 | overlap 1313359 1313358 GGCCCTTCCGTGACA GTGCCTGCA GCAT TGCAGGCAC TGAATTCTAATTCGC plsX 1313302 - 1314372 + | fatty acid/phospholipid synthesis protein fabH 1314440 - 1315393 + | 3-oxoacyl-[acyl-carrier-protein] synthase III fabD 1315409 - 1316338 + | malonyl-CoA-[acyl-carrier-protein] transacylase TERM 1799 1316390 - 1316370 - g 90 -7.5 -4.86621 | overlap 1316372 ATTTTGAAGGAAAAA TCGCACTGG TAA CCGGTGCAA GCCGCGGAATTGGCC fabG 1316351 - 1317085 + | 3-oxoacyl-[acyl-carrier-protein] reductase acpP 1317296 - 1317532 + | acyl carrier protein (ACP) TERM 1800 1317568 - 1317540 - f 72 -9.6 -3.15056 | gap 1, opp_overlap 1317541 1317544, overlap 1317538 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTTGTCC TERM 1801 1317541 - 1317567 + F 100 -13.1 -5.02287 | gap 1, opp_overlap 1317540 1317538, overlap 1317544 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTTGTC TERM 1802 1317544 - 1317565 + F 100 -15.9 -2.72919 | opp_overlap 1317540 1317538, overlap 1317541 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTTG TERM 1803 1317993 - 1317973 - g 70 -3.9 -4.68384 | overlap 1317978 ACTGATCGAAGAAAA CCACACATC TCT GATGAACGG TGGTCCACGTAAGAT TERM 1804 1318289 - 1318264 - g 74 -10.3 -3.51329 | TACCCGCAATGATAA CCCGCAAGCGG CGAG CCGCCCGTGGG ATAAAGAGCGTGATG fabF 1317620 - 1318861 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 1805 1318887 - 1318902 + F 100 -8.2 -5.55769 | opp_overlap 1318887 TCCACCCTTATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTGTGCAC TERM 1806 1318902 - 1318887 - f 73 -6 -4.38712 | opp_overlap 1318887 TCCACCCTTATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTGTGCAC TERM 1807 1318942 - 1318924 - gf 100 -16 -4.52589 | CTTGTGCACAGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC ECUMN_1271 1318910 - 1319098 + | hypothetical protein ECUMN_1272 1319004 - 1319513 + | transposase IS605 family, IS200 group TERM 1808 1319588 - 1319620 + F 93 -11.3 -4.43037 | opp_overlap 1319595, overlap 1319592 1319594 1319595 CCTTATAGGCGCATT TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTAGTTTTTATTCC TERM 1809 1319592 - 1319616 + F 91 -9.9 -4.71307 | opp_overlap 1319595, overlap 1319588 1319594 1319595 ATAGGCGCATTTGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTAGTTTTTA TERM 1810 1319594 - 1319614 + F 100 -12.5 -3.92649 | opp_overlap 1319595, overlap 1319592 1319588 1319595 AGGCGCATTTGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTAGTTTT TERM 1811 1319595 - 1319613 + F 100 -16 -2.93149 | opp_overlap 1319595, overlap 1319594 1319592 1319588 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAGTTT TERM 1812 1319613 - 1319595 - f 100 -16 -4.62069 | opp_overlap 1319595 1319594 1319592 1319588 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAGTTT pabC 1319693 - 1320502 + | 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex yceG 1320505 - 1321527 + | putative conserved membrane associated protein TERM 1813 1321976 - 1321961 - g 91 -11.8 -4.07885 | GAGGTTGGCTTAAAA CGCGCG CGTG CGCGCG GCGAGCTGGATCGTA tmk 1321517 - 1322158 + | thymidylate kinase TERM 1814 1322204 - 1322194 - g 81 -6.8 -4.59773 | CCTGATTTCGAAAAA CTGG TAG CCAG CTATCAGGCCGGAAG TERM 1815 1322560 - 1322574 + G 71 -2.8 -4.7497 | opp_overlap 1322570 ACGCTTGAAGAGCCA CCAG CAGAAAC CTGG TTTTTCCTGGCTACC TERM 1816 1322736 - 1322763 + G 90 -12 -3.90922 | gap 1 CGCATTGCGCTTAAG CGCCGGT-TCGCC TGG GGCGGCACTGGCG TTGTTTCAGGGAGAT TERM 1817 1322938 - 1322926 - g 81 -9.1 -4.09864 | ATGGATGCGCTAAAA CGCCA TCA TGGCG CTGCGCAGGTGACCA holB 1322155 - 1323159 + | DNA polymerase III, delta prime subunit ycfH 1323170 - 1323967 + | putative metallodependent hydrolase TERM 1818 1324039 - 1324012 - f 76 -8.4 -3.93057 | overlap 1324013 GCTAAAACGAGTAAA GTTCACCGCCGA AAAT TGGGCGGTGAAT AACCACGTTTGAAAT TERM 1819 1324038 - 1324013 - f 80 -11.9 -2.95111 | overlap 1324012 CTAAAACGAGTAAAG TTCACCGCCGA AAAT TGGGCGGTGAA TAACCACGTTTGAAA TERM 1820 1325106 - 1325089 - g 70 -4 -4.61566 | opp_overlap 1325089 1325087 TGCTAAACCAGAAAA CCGCGC GAAAGT GGGCGG TATTATGATCTCCGC ptsG 1324262 - 1325695 + | fused glucose-specific PTS enzymes: IIBcomponent ; IIC component TERM 1821 1325737 - 1325720 - T 86 -12.7 -3.25823 | opp_overlap 1325720 CGTTGGGGAGACTAA GGCAGCC GGAT GGCTGCC TTTTTTACAGGTGTT TERM 1822 1325720 - 1325737 + T 100 -12.7 -5.04987 | opp_overlap 1325720 CGTTGGGGAGACTAA GGCAGCC GGAT GGCTGCC TTTTTTACAGGTGTT fhuE 1327944 - 1325755 - | ferric-rhodotorulic acid outer membrane transporter TERM 1823 1326450 - 1326475 + g 79 -4.7 -4.88736 | gap 1, opp_overlap 1326448 1326450 CATTGATGTCAAACA CCAGACCAGCGT AAG GCG-TGGTGTGG TTTTTCTCCATGCTG TERM 1824 1328502 - 1328492 - g 75 -5.4 -4.59773 | CCGTAGCGGCAAAAA TTGC TGA GCAA GAAGGTATTGCCGAA hinT 1328278 - 1328637 + | purine nucleoside phosphoramidase ycfL 1328640 - 1329017 + | hypothetical protein ycfM 1329031 - 1329672 + | putative outer membrane lipoprotein TERM 1825 1329682 - 1329703 + G 91 -9.4 -4.58685 | CAATAATCCCATCAC GCGCGACG AATTGC TGTCGCGC TTTTTCCCGCAATTT ycfN 1329653 - 1330477 + | thiamin kinase TERM 1826 1331382 - 1331392 + G 70 -6.8 -4.08706 | opp_overlap 1331382 CCGATCAAGGCAGAA CGTG TTA CACG TTTGTATCATAAAGG nagZ 1330488 - 1331513 + | beta N-acetyl-glucosaminidase ycfP 1331536 - 1332078 + | hypothetical protein ndh 1332478 - 1333782 + | respiratory NADH dehydrogenase 2/cupric reductase TERM 1827 1333849 - 1333881 + F 79 -12 -2.60723 | opp_overlap 1333858, overlap 1333848 TGGTACGAGCGGTAG GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC ATTCCTTCAGACTCC ycfJ 1334009 - 1334548 + | hypothetical protein TERM 1828 1334571 - 1334597 + T 100 -10.1 -5.43866 | opp_overlap 1334571 GTACTCTGCAATTTA GCCCCTCATTC GCTCA GGCTGAGGGGC TTTTTTTGCGCCTTA ycfQ 1335242 - 1334610 - | putative DNA-binding transcriptional regulator TERM 1829 1335198 - 1335208 + g 100 -2.4 -5.77853 | GTCGAACACTTTTGG GCGG CCA CGGC TTTTTTTTACACATT TERM 1830 1335505 - 1335516 + G 70 -5.8 -4.15006 | opp_overlap 1335500 ACGTAAAAACCCTCA TCGC TGCG GCGA TTTTAAGCTCCATGT ycfR 1335483 - 1335740 + | hypothetical protein TERM 1831 1335779 - 1335805 + T 100 -18.8 -5.93809 | CTACTGCTGATTTTT TCCCCGCGACAT GCC GTGTCGCGGGGA TTTTTTTTATCCAGG ycfS 1336785 - 1335823 - | hypothetical protein TERM 1832 1336664 - 1336704 + g 70 -6.8 -4.11216 | gap 1, opp_overlap 1336670 1336673, overlap 1336665 1336670 1336673 AATTTGTTTTCGCCA ACCAGACGACTGCCCGCTG GCGG CAGCGGCCAGGTGT-TGGC TTTTGCCGGTAGCGC TERM 1833 1336670 - 1336699 + g 72 -9.9 -3.37091 | opp_overlap 1336670 1336673, overlap 1336665 1336664 1336673 TTTTCGCCAACCAGA CGACTGCCCGCTG GCGG CAGCGGCCAGGTG TTGGCTTTTGCCGGT TERM 1834 1336696 - 1336673 - G 77 -12.4 -2.69964 | opp_overlap 1336670 1336665 1336664 1336673, overlap 1336670 TCGCCAACCAGACGA CTGCCCGCTG GCGG CAGCGGCCAG GTGTTGGCTTTTGCC TERM 1835 1336673 - 1336696 + g 76 -12.4 -2.54586 | opp_overlap 1336673 1336670, overlap 1336670 1336665 1336664 TCGCCAACCAGACGA CTGCCCGCTG GCGG CAGCGGCCAG GTGTTGGCTTTTGCC mfd 1340376 - 1336930 - | transcription-repair coupling factor TERM 1836 1337892 - 1337904 + g 70 -6.9 -4.01564 | overlap 1337886 GCACCAGTTCCGCCA GCCGT TCG GCGGC TTTCTGGATGTTTTC TERM 1837 1339147 - 1339157 + g 72 -5.4 -4.45544 | opp_overlap 1339134 AAGACGCATAATGCG TTGC GGA GCAA TTTTAATTCGTGCGA TERM 1838 1339257 - 1339272 + g 82 -3.2 -5.20333 | CGAGGAACTTACGTA GCGC ATCCAGCG GCGC TTTTTGTTGTGCCTG TERM 1839 1340482 - 1340499 + r 81 -12.7 -2.52543 | opp_overlap 1340482 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGCTTAGCGGGAGT TERM 1840 1340499 - 1340482 - R 90 -12.7 -3.30701 | opp_overlap 1340482 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGCTTAGCGGGAGT ycfT 1341577 - 1340504 - | conserved hypothetical protein; putative inner membrane protein TERM 1841 1340922 - 1340907 - G 78 -9 -4.0031 | opp_overlap 1340921, overlap 1340919 ACGGTCAGCAAAGAA GCCATC AGCA GATGGC GGCGCAACGGCACCT TERM 1842 1342568 - 1342555 - g 91 -8.1 -5.13741 | TTAAGTCAACAAAAA CTGCC TGAA GGCAG CAAATGGCAGGACTG TERM 1843 1342662 - 1342674 + G 84 -10.5 -3.72051 | GCTGAGCCTGATTGT CGCCG TAG CGGCG TTTAACATTATTACC lolC 1341838 - 1343037 + | outer membrane-specific lipoprotein transporter subunit ; membrane component of ABC superfamily TERM 1844 1343406 - 1343383 - g 74 -2.4 -5.07486 | gap 1, overlap 1343385 GATTGGCAAGAAAAA GCCCG-CTG AAATCAA CAGTCGAGC GTTGGAAATGTTAAA lolD 1343030 - 1343731 + | outer membrane-specific lipoprotein transporter subunit ; ATP-binding component of ABC superfamily lolE 1343731 - 1344975 + | outer membrane-specific lipoprotein transporter subunit ; membrane component of ABC superfamily ycfX 1345004 - 1345915 + | N-acetyl-D-glucosamine kinase cobB 1345931 - 1346752 + | deacetylase of acetyl-CoA synthetase, NAD-dependent ycfZ 1347675 - 1346890 - | conserved hypothetical protein; putative inner membrane protein ymfA 1348133 - 1347672 - | conserved hypothetical protein; putative inner membrane protein TERM 1845 1348159 - 1348182 + r 72 -9.5 -3.22091 | opp_overlap 1348160, overlap 1348160 CTTGCTAAATAAAAA ACGGGCGGT AATACC ACCGCCCGC TTGCTGAATTAACGT TERM 1846 1348160 - 1348181 + r 84 -13 -2.52933 | opp_overlap 1348160, overlap 1348159 TTGCTAAATAAAAAA CGGGCGGT AATACC ACCGCCCG CTTGCTGAATTAACG TERM 1847 1348181 - 1348160 - R 100 -13.7 -5.63517 | opp_overlap 1348160 1348159 TTGCTAAATAAAAAA CGGGCGGTA ATAC CACCGCCCG CTTGCTGAATTAACG potD 1349237 - 1348191 - | polyamine transporter subunit ; periplasmic-binding component of ABC superfamily potC 1350028 - 1349234 - | polyamine transporter subunit ; membrane component of ABC superfamily TERM 1848 1350074 - 1350087 + r 83 -3.9 -5.42514 | AGCACTTTCAGGATT TTGAA TTTA TTCAA TTTTTTCCTTTCTCC int 1351313 - 1350195 - | Integrase from bacteriophage origin TERM 1849 1351206 - 1351218 + gr 74 -3.3 -4.93296 | GAGTCCGTGAAATTT TCCAG TCA CAGGA TTTTTATACTGGTAG ECUMN_1304 1351560 - 1351282 - | putative excisionase for bacteriophage origin ECUMN_1305 1354069 - 1351613 - | Exodeoxyribonuclease VIII from bacteriophage origin TERM 1850 1351801 - 1351818 + g 76 -12.7 -2.55351 | opp_overlap 1351794, overlap 1351800 TGTAGTAACGCCACG GGCAGGG GATC CCCTGCC GTTCGTATGAACGGC TERM 1851 1352414 - 1352438 + g 72 -7.2 -4.21098 | gap 1 GCAGTTGCCGCCGCC GGTCTG-ACCG CAGG CGGTGCAGATC TTTTCCGGTTCCTGT ECUMN_1306 1354350 - 1354147 - | conserved hypothetical protein from bacteriophage origin dicB 1354535 - 1354347 - | Cell division inhibition protein dicB from bacteriophage origin ECUMN_1308 1355400 - 1354546 - | conserved hypothetical protein from bacteriophage origin TERM 1852 1354833 - 1354876 + g 75 -4.8 -4.84363 | gap 2, overlap 1354857 CTTCTTTGAAAGTTG CGGCTTT-TTTACCT-GTGA ACCCCA TCACCAGGAAAACGAAGCCG TTTTTGGTGATTTGG TERM 1853 1355293 - 1355280 - G 100 -5.2 -5.64274 | opp_overlap 1355280 1355288 TGACGCATAAAAAAA CCGC CTGAGC GCGG TTATGCGCTTGATTG ECUMN_1309 1356317 - 1355931 - | hypothetical protein from bacteriophage origin dicA 1357083 - 1356676 - | repressor protein of division inhibition from bacteriophage origin TERM 1854 1356799 - 1356813 + g 74 -2.8 -4.9181 | opp_overlap 1356801, overlap 1356801 AGGCAGTGCGTCGAA CAGTTG AAG CAACTC TTTTTGATCTTCTGT TERM 1855 1357065 - 1357075 + g 80 -5.4 -4.88228 | ATAAGAGGCGAGCAC CGAA GGT TTCG TTTTTCATATTAGGT dicC 1357160 - 1357387 + | DNA-binding transcriptional regulator for DicB; Qin prophage ECUMN_1313 1357371 - 1357922 + | conserved hypothetical protein from bacteriophage origin ECUMN_1314 1357819 - 1358934 + | conserved hypothetical protein from bacteriophage origin ECUMN_1315 1358927 - 1359388 + | conserved hypothetical protein from bacteriophage origin ECUMN_1316 1359404 - 1360192 + | conserved hypothetical protein from bacteriophage origin; putative coiled-coil; putative Transcriptional regulator ECUMN_1317 1360193 - 1360600 + | conserved hypothetical protein from bacteriophage origin ECUMN_1318 1360597 - 1360893 + | conserved hypothetical protein from bacteriophage origin ECUMN_1319 1360890 - 1361351 + | conserved hypothetical protein from bacteriophage origin; putative coiled-coil ECUMN_1320 1361329 - 1361685 + | conserved hypothetical protein frmo bacteriophage origin; putative coiled-coil ECUMN_1321 1361781 - 1362188 + | conserved hypothetical protein from bacteriophage origin ECUMN_1322 1362190 - 1362555 + | putative HNH endonuclease from bacteriophage origin ECUMN_1323 1362552 - 1363538 + | conserved hypothetical protein from bacteriophage origin TERM 1856 1363773 - 1363788 + F 81 -3.2 -5.42862 | overlap 1363786 TTGATATTAATGTTT GGACAT ATAA ATGCCC TTTTTTTAGGGGTGT TERM 1857 1364033 - 1363983 - f 100 -12.1 -4.64844 | gap 1 GGCAGATAGAGAAAA GCCCCAG-TTAACATTACGCGTCC TGCA AGACGCTTAACATTAATCTGAGGC CATATCTATGCGACA TERM 1858 1364126 - 1364111 - f 85 -9 -4.36411 | TATGAAGCAGCAAAA GGCGAT GTTA ATCGCC CTGATCGTCATCTGT TERM 1859 1364281 - 1364260 - f 100 -15.9 -2.77416 | opp_overlap 1364257 1364255, overlap 1364253 1364255 1364273 AGGAGTAAGAGACCA GGCGAGGGA GAAA TCCCTCGCC ACCTCTGATGTGGCA TERM 1860 1364323 - 1364336 + F 100 -9.5 -5.77734 | opp_overlap 1364323 CGCACCCGCACTTAA CCCGC TTCG GCGGG TTTTTGTTTTTATTT TERM 1861 1364336 - 1364323 - f 71 -9.5 -3.06183 | opp_overlap 1364323 CGCACCCGCACTTAA CCCGC TTCG GCGGG TTTTTGTTTTTATTT rem 1364469 - 1364720 + | conserved hypothetical protein; Qin prophage TERM 1862 1364795 - 1364766 - f 81 -11.4 -3.13403 | overlap 1364764 TCCCGCTGAGTAACA CCGTGCCACCGG AGAAAA CCGATGGCACGC AACGCAAAATATTAC ECUMN_1325 1364787 - 1365065 + | conserved hypothetical protein from bacteriophage origin ydfU 1365067 - 1366125 + | conserved hypothetical protein from phage origin TERM 1863 1366327 - 1366277 - g 74 -9.9 -3.54676 | AGCGACTGAAATTAA GCCTGTCCGGACGGCT-GGCAATAA AAA TTATTGCAGAGCCA-CCGGATAAGC GTCGTCGTGACCTGG ECUMN_1327 1366126 - 1366494 + | putative crossover junction endodeoxyribonuclease rusA (Holliday junction nuclease rusA) (Holliday juction resolvase) (Gp67) TERM 1864 1366581 - 1366562 - g 75 -7.2 -4.37092 | gap 1, opp_overlap 1366580 AGTGGGTCGACAAAA TGCCA-GCT GGA AGCCTGGCA GGAAAATGCCCTGTT TERM 1865 1366608 - 1366588 - g 72 -6.8 -4.25283 | opp_overlap 1366580, overlap 1366589 AGCCTGGCAGGAAAA TGCCCTGT TCGAT ACAGGGCG TTACAGACGCAAAAA TERM 1866 1366607 - 1366589 - g 70 -10.3 -3.14848 | opp_overlap 1366580, overlap 1366588 GCCTGGCAGGAAAAT GCCCTGT TCGAT ACAGGGC GTTACAGACGCAAAA Q 1366481 - 1367176 + | Antitermination protein Q TERM 1867 1367266 - 1367234 - f 71 -10.2 -2.76162 | gap 1, opp_overlap 1367244, overlap 1367237 1367244 TACGTGATGGCAAAG TAAGAAAAAACCACC GCCA GGTGGTTTTTT-TTA TGTCCGAAAATCGCG TERM 1868 1367264 - 1367237 - f 77 -10 -3.53031 | opp_overlap 1367244, overlap 1367234 1367244 GTGATGGCAAAGTAA GAAAAAACCACC GCCA GGTGGTTTTTTT TATGTCCGAAAATCG TERM 1869 1367257 - 1367244 - f 100 -8.1 -5.59655 | opp_overlap 1367244, overlap 1367237 1367234 CAAAGTAAGAAAAAA CCACC GCCA GGTGG TTTTTTTTATGTCCG TERM 1870 1367244 - 1367257 + F 100 -8.1 -6.02914 | opp_overlap 1367244 1367237 1367234 CAAAGTAAGAAAAAA CCACC GCCA GGTGG TTTTTTTTATGTCCG ECUMN_1329 1367254 - 1367586 + | conserved hypothetical protein from bacteriophage origin TERM 1871 1367573 - 1367590 + GF 100 -4.1 -5.73978 | opp_overlap 1367574, overlap 1367574 TTGGTTGTTACAGAC ACCTTCA GTCC TGAAGGC TTTTTTATTTGTGGT TERM 1872 1367574 - 1367589 + GF 74 -7.6 -4.01946 | opp_overlap 1367574, overlap 1367573 TGGTTGTTACAGACA CCTTCA GTCC TGAAGG CTTTTTTATTTGTGG ECUMN_1330 1367528 - 1367824 + | hypothetical protein from bacteriophage origin TERM 1873 1367900 - 1367921 + F 100 -15.9 -4.3341 | CATAGCGCCACTCTC CAGCCCCTC TCCG GAGGGGCTG TTTATATTGATTTTG ECUMN_1332 1368737 - 1368898 + | conserved hypothetical protein from bacteriophage origin TERM 1874 1368984 - 1369006 + F 100 -9.9 -5.68489 | opp_overlap 1368984 GCATGAGTTATCAGA GCCATCAGT ACTTA ACTGGTGGC TTTTTTATTGTTGTC essD 1369048 - 1369263 + | putative phage lysis protein S; DLP12 prophage TERM 1875 1369728 - 1369717 - g 70 -5.8 -4.25104 | opp_overlap 1369717 1369716 TTCTGGCGATGAAAA GCAG TTTG CTGC GTTTGACGATTATTG ECUMN_1334 1369265 - 1370158 + | conserved hypothetical protein from bacteriophage origin; putative coiled-coil, putative Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit ydfQ 1370195 - 1370728 + | putative membrane-associated lysozyme; Qin prophage TERM 1876 1370823 - 1370847 + F 75 -4.9 -4.84918 | opp_overlap 1370823, overlap 1370818 1370836 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGAGG TTTTGTGTTTCTGAC TERM 1877 1370847 - 1370823 - f 82 -4.9 -5.17786 | opp_overlap 1370823 1370818 1370836 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGAGG TTTTGTGTTTCTGAC ECUMN_1336 1370852 - 1371067 + | conserved hypothetical protein from bacteriophage origin rz 1371210 - 1371683 + | Endopeptidase (Lysis protein) from bacteriophage origin ECUMN_1338 1371940 - 1372320 + | putative tonB-like membrane protein encoded within prophage TERM 1878 1372435 - 1372413 - T 95 -12.8 -3.70853 | opp_overlap 1372410 1372410 1372405 GGAATGATGGAAGAA GGCGTTGTAT GCC ACACAACGCC TCACTGTTCATTTCT ECUMN_1339 1372796 - 1372443 - | conserved hypothetical protein from bacteriophage origin ECUMN_1341 1373004 - 1372684 - | conserved hypothetical protein from bacteriophage origin TERM 1879 1373223 - 1373236 + H 75 -5.2 -4.85396 | opp_overlap 1373215 AAATAGACATGTAAG CCGG ACATGA CCGG TTTTGTTGTGATTGT ECUMN_1342 1373279 - 1373788 + | putative Terminase small subunit (DNA packaging protein Nu1) from bacteriophage origin TERM 1880 1374344 - 1374327 - g 70 -4.1 -4.59773 | opp_overlap 1374329, overlap 1374329 CCGGATGTCGAAAAA GAGGGTT CGCC AACCCTG CTTGGGGATAAACGT TERM 1881 1374451 - 1374463 + G 90 -7.7 -4.9792 | opp_overlap 1374435 CGGCCAACGAGTCGG CGCAT TTC ATGCG TTTTTATGTGCCCTG TERM 1882 1375117 - 1375104 - g 91 -3.1 -5.5112 | gap 1, overlap 1375106 1375107 1375108 GCGATCAACAAAAAA TACCGC CAT GCGG-A TGGCACCGAAATGAC TERM 1883 1375116 - 1375106 - g 81 -8.2 -4.39002 | overlap 1375104 1375107 1375108 GATCAACAAAAAATA CCGC CAT GCGG ATGGCACCGAAATGA TERM 1884 1375215 - 1375200 - g 95 -6.1 -5.45726 | CAGAGGTCAAAAAAA CACGG TGTTTT CCGTG TGCTGCCGGTAAAAG TERM 1885 1375287 - 1375273 - g 77 -8.5 -4.12188 | TCACCATGCCGAAAA CCCGC AATCA GCGGG GCGTTTATCTGTGTG TERM 1886 1375395 - 1375413 + G 76 -3.8 -5.00616 | overlap 1375397 TCGTATGCCATCCGT TTTCCTGA TGA TCCGGAGA TTTTTTCGCAGACAG ECUMN_1343 1373790 - 1375688 + | Terminase large subunit (Gp2) ECUMN_1344 1375672 - 1375878 + | Head stabilization protein (Head protein GP3) TERM 1887 1377388 - 1377369 - g 72 -4.9 -4.61231 | overlap 1377370 GCAGAGCGGGAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGCGCAGGC ECUMN_1345 1375875 - 1377467 + | Portal protein (Head protein GP4) TERM 1888 1377517 - 1377532 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC TERM 1889 1378736 - 1378699 - g 72 -4.6 -4.59773 | overlap 1378684 1378701 GCGCAGGCTGAAAAA CTGGCGGCCTGCCCGG GAATGA CCGTGGAGAACGCCCG GGCTGTGCTGGCTGC ECUMN_1346 1377457 - 1378905 + | Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] TERM 1890 1379256 - 1379241 - g 91 -7.6 -5.1244 | overlap 1379247 GGATGAACACAAAAA GGCAAA TGCC TTTGCC GGCACAGCCCTGAGT ECUMN_1347 1378942 - 1379289 + | Head decoration protein (Head protein GPshp) TERM 1891 1379294 - 1379322 + F 79 -9 -3.91897 | gap 1, overlap 1379296 CTCTGCCGTAACACG TTA-TCAGGCCAC CATG GTGGCCTGACTGA TTTCTGAATGAAAGG TERM 1892 1379296 - 1379319 + F 76 -11 -3.02745 | overlap 1379294 CTGCCGTAACACGTT ATCAGGCCAC CATG GTGGCCTGAC TGATTTCTGAATGAA TERM 1893 1379499 - 1379489 - g 88 -8.2 -4.652 | opp_overlap 1379489, overlap 1379480 1379490 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG ECUMN_1348 1379347 - 1380375 + | Major head protein (Head protein gp7) TERM 1894 1380381 - 1380406 + G 100 -9.7 -5.00616 | gap 1, opp_overlap 1380395 1380396, overlap 1380384 1380396 GGTGAAATAATCCGT GA-GCGGGGGCG AAA TGCCCCCGTGTC TTTTTTCACAGGGGG TERM 1895 1380384 - 1380402 + G 100 -13.8 -3.66166 | opp_overlap 1380395 1380396, overlap 1380381 1380396 GAAATAATCCGTGAG CGGGGGCG AAA TGCCCCCG TGTCTTTTTTCACAG ECUMN_1349 1380379 - 1380801 + | conserved hypothetical protein from phage origin ECUMN_1350 1380794 - 1381147 + | Tail attachment protein (Minor capsid protein FII) TERM 1896 1381231 - 1381219 - g 77 -6.9 -4.56597 | CCGGGTTCGTAAAAA CGCCA TTC CGGCG GCTTCAGCAATGACG ECUMN_1351 1381163 - 1381696 + | Minor tail protein Z (GpZ) TERM 1897 1381747 - 1381780 + G 82 -7.5 -4.56597 | gap 1, opp_overlap 1381747 1381749, overlap 1381749 CTCGAGCAGCATGAA CA-CGGGGCGAC GCTGTTTGATG GTCGCCCCGTTG TTTTTGACGAAGAGG TERM 1898 1381749 - 1381777 + G 90 -10.3 -4.40561 | opp_overlap 1381749 1381747, overlap 1381747 CGAGCAGCATGAACA CGGGGCGAC GCTGTTTGATG GTCGCCCCG TTGTTTTTGACGAAG TERM 1899 1381777 - 1381749 - g 70 -10.3 -3.18023 | opp_overlap 1381747 1381749, overlap 1381747 CGAGCAGCATGAACA CGGGGCGAC GCTGTTTGATG GTCGCCCCG TTGTTTTTGACGAAG TERM 1900 1381955 - 1381940 - g 77 -10.4 -3.6608 | ATCAGTGGATGGAAA GCCGGA TTTA TCCGGC GATGACTGCGATCCC ECUMN_1352 1381693 - 1382088 + | Minor tail protein U ECUMN_1353 1382096 - 1382845 + | Major tail protein V ECUMN_1354 1382864 - 1383295 + | Minor tail protein G TERM 1901 1383311 - 1383346 + F 85 -13.2 -2.71364 | ACTTTGCCCTCAGAC TGGCGCGTGAGATGGG GAGA CCCGACTGGCGCGCCA TGCTTGCCGGGATGA TERM 1902 1383441 - 1383468 + G 100 -11.4 -5.44119 | gap 1 GGATATGCATTTTTC CGGGCTGACGTAC GCT GTAC-TCAGCCTG TTTTTTTGCGATCCG ECUMN_1355 1383322 - 1383735 + | Minor tail protein T TERM 1903 1385089 - 1385074 - g 81 -6.8 -4.60041 | AGCGACGCTGAAAAA GCCGAA ACAG TCCGGC GTGAAGGTGTCTGCG TERM 1904 1385688 - 1385673 - g 70 -4 -4.65895 | gap 1, opp_overlap 1385673 1385673 TGTCGCAGGTAAAAA GTGCTGC CAC GCAG-AC CTTTGATGGTATTGC ECUMN_1356 1383716 - 1386277 + | Minor tail protein precursor H ECUMN_1358 1386617 - 1386501 - | hypothetical protein ECUMN_1357 1386274 - 1386603 + | Minor tail protein M TERM 1905 1386893 - 1386924 + GH 70 -9.4 -2.91429 | gap 1, opp_overlap 1386884, overlap 1386921 GGAAGACCTGCAGAG TCTGGTGG-GGGCCA CGG TGGTCCGCCGCCGGG TGTATGCCCGTTTTC TERM 1906 1386921 - 1386934 + GH 72 -5.9 -4.42653 | overlap 1386893 ACGGTGGTCCGCCGC CGGGT GTAT GCCCG TTTTCTGGATGCGGT ECUMN_1359 1386603 - 1387301 + | Minor tail protein L TERM 1907 1387584 - 1387574 - gfH 71 -2.4 -4.96848 | GGCTGCAGATAAAAA GCGC ACT GCCC TGGTGGCTGGTCTGC ECUMN_1360 1387312 - 1388055 + | tail fiber component K ECUMN_1361 1387953 - 1388633 + | Tail assembly protein I TERM 1908 1388679 - 1388648 - f 100 -5 -6.04419 | AAAAGAATAAAAAAA TCCCGCAGTGATCG CGGA CAGGAACTGCGGGA GAGTTACGAAGATTA TERM 1909 1388847 - 1388870 + F 100 -16.8 -4.33928 | opp_overlap 1388847 GGGCATGAAAGAAAA CCCCGGTATC TGCT GATACCGGGG TTTCTCTTTAGCATG TERM 1910 1388870 - 1388847 - f 100 -16.8 -4.93877 | opp_overlap 1388847 GGGCATGAAAGAAAA CCCCGGTATC TGCT GATACCGGGG TTTCTCTTTAGCATG TERM 1911 1389235 - 1389203 - g 77 -12.7 -2.83715 | overlap 1389205 GGGAGCAGGAGCAGA CACCACCGGAAGGCT TTG AGTCCTCCGGTGCTG AAACCGGACTGGGCG TERM 1912 1391535 - 1391520 - g 71 -9 -3.42069 | overlap 1391523 GCAACTGGAAGAAGA CATCCG TCAG CGGATG GACACGGATATCGCA TERM 1913 1391797 - 1391784 - g 71 -2.3 -4.88736 | overlap 1391785 GACCACGGATAAAAA GCTGG GTGA CCAGG CCGTGACCATACAGC ECUMN_1362 1388977 - 1392669 + | Host specificity protein J TERM 1914 1392689 - 1392706 + F 100 -12.7 -5.4505 | opp_overlap 1392680 1392687 TATAACCCCAATACG GGCGCCA GAAA TGGCGCC TTTTTTATTGCAGAA ECUMN_1363 1392737 - 1393336 + | Putative Lom-like outer membrane protein of phage origin TERM 1915 1393443 - 1393466 + F 100 -10.2 -5.84381 | TTACACTGTCCTGAA GCCCGTGGCG TCAC TGCTGCGGGC TTTTTTTATTGGTGG TERM 1916 1393906 - 1393875 - g 79 -4.5 -5.02074 | overlap 1393878 GCAGCCGCGAAAAAA TCAGCCAGC-GATGC CAGT GCATCAGCCAGC-GA GGCGGCAACTCATGC TERM 1917 1394100 - 1394071 - g 75 -4.9 -4.76041 | gap 1, overlap 1394072 CAGAGTCATCAAAAA GCGCGGCAGCTACC AGC GCCAG-TGCCGCGA AAACGTCAGAAACGA TERM 1918 1394328 - 1394314 - g 84 -7.8 -4.59853 | CGAAGGCGGCAAAAA CGTCCG AGA CGAACG CTAAGTCTTCTGAAA TERM 1919 1394827 - 1394784 - g 72 -8.8 -3.83998 | gap 1, overlap 1394785 GCATCTCAGAGCAAA GTTGCTGCTGAATCCGCG-GC AAC GCGCGCCGAGACAGCAGCAAA ACGGGCAGAGGATAT TERM 1920 1394826 - 1394785 - g 78 -12.3 -2.90078 | gap 1, overlap 1394784 CATCTCAGAGCAAAG TTGCTGCTGAATCCGCG-GC AAC GCGCGCCGAGACAGCAGCAA AACGGGCAGAGGATA TERM 1921 1395248 - 1395236 - g 73 -9.1 -3.61103 | TAATTTGACCGGAAA CGCAG ATA CTGCG ACCAAGATCAAGACA ECUMN_1364 1393488 - 1396514 + | Side tail fiber protein from bacteriophage origin TERM 1922 1396931 - 1396915 - g 100 -6.5 -5.80003 | overlap 1396918 GGAAGAAACAAAAAA CAACCTG ATG CAGGTAG CCAGTGAGCATATTG TERM 1923 1396928 - 1396918 - g 86 -6.8 -4.9072 | overlap 1396915 AGAAACAAAAAACAA CCTG ATG CAGG TAGCCAGTGAGCATA tfaQ 1396514 - 1397098 + | putative tail fibre chaperone; Qin prophage TERM 1924 1397103 - 1397155 + T 87 -7.8 -5.08824 | gap 1, overlap 1397105 1397113 TCAGGGAGTAATCAT TGGGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGCTA TTTTTTCCCTGAAGC TERM 1925 1397105 - 1397153 + T 76 -8.2 -4.17608 | gap 1, overlap 1397103 1397113 AGGGAGTAATCATTG GGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGC TATTTTTTCCCTGAA TERM 1926 1397113 - 1397145 + T 100 -17.2 -3.16564 | gap 1, overlap 1397105 1397103 ATCATTGGGATTATG CCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGG TTGGATGCTATTTTT ybcY 1397737 - 1397153 - | putative AdoMet-dependent methyltransferase; DLP12 prophage ECUMN_1367 1397878 - 1398144 + | Putative tail fiber assembly protein TERM 1927 1398179 - 1398212 + T 81 -11.7 -3.11291 | overlap 1398171 ATTTTGTGCTTGAAG TGCCTCCCCGACCAT TCAG ATAGTCGGGGAGGGG TATTGGGATTATACG potB 1399239 - 1398376 - | polyamine transporter subunit ; membrane component of ABC superfamily potA 1400359 - 1399223 - | polyamine transporter subunit ; ATP-binding component of ABC superfamily ECUMN_1370 1400589 - 1400338 - | hypothetical protein pepT 1400609 - 1401835 + | peptidase T TERM 1928 1401869 - 1401843 - T 100 -15.2 -4.32201 | opp_overlap 1401843, overlap 1401844 GGAAGTAAGCGAAAA GGGATGCGGCAT GTG ATGCCGCATCCG GCTTAAATCCAAACT TERM 1929 1401868 - 1401844 - T 100 -18.7 -3.18598 | opp_overlap 1401843, overlap 1401843 GAAGTAAGCGAAAAG GGATGCGGCAT GTG ATGCCGCATCC GGCTTAAATCCAAAC ycfD 1403005 - 1401884 - | hypothetical protein phoQ 1404541 - 1403081 - | sensory histidine kinase in two-compoent regulatory system with PhoP TERM 1930 1403690 - 1403700 + g 77 -8.2 -4.13014 | CGTACTTTGCAGCAC CGCC AGT GGCG TTTTCAGACTATGGG phoP 1405212 - 1404541 - | DNA-binding response regulator in two-component regulatory system with PhoQ TERM 1931 1405373 - 1405342 - R 87 -11.6 -3.6968 | gap 1, opp_overlap 1405357, overlap 1405343 1405345 1405357 GGATAATCTTAATAA GCAG-GCCGGACAGC ATC GCTATCCGGCACTGA TACGAGTTTATTTCA TERM 1932 1405372 - 1405343 - R 89 -15.1 -2.81326 | gap 1, opp_overlap 1405357, overlap 1405342 1405345 1405357 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCTATCCGGCACTG ATACGAGTTTATTTC TERM 1933 1405369 - 1405345 - R 80 -12.1 -2.94759 | opp_overlap 1405357, overlap 1405343 1405342 1405357 TAATCTTAATAAGCA GGCCGGACAGC ATC GCTATCCGGCA CTGATACGAGTTTAT purB 1406751 - 1405381 - | adenylosuccinate lyase hflD 1407396 - 1406755 - | putative inner membrane protein; lambda lysogenization regulator, UPF0274 family TERM 1934 1407256 - 1407237 - G 75 -5.7 -4.59773 | gap 1, opp_overlap 1407238, overlap 1407238 CGCTACCGCCAAAAA CCGCCAGC GTCGA GCTGG-GG TTCATATCAATAATA trmU 1408538 - 1407432 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1935 1408448 - 1408434 - G 72 -7.8 -3.86346 | opp_overlap 1408436 CCAGTTCTTCATAAA CAGGCC TTC GACCTG ATATCCCTGTTGTTG TERM 1936 1408566 - 1408589 + r 70 -6 -4.18018 | gap 1, opp_overlap 1408560 GACATTGAACTTCAA GGCGGCGT-AT TCT ATCACGCAGCC TTTTAGATGACACCC ymfB 1409053 - 1408592 - | bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase ymfC 1409716 - 1409063 - | 23S rRNA pseudouridine synthase TERM 1937 1409664 - 1409676 + g 77 -2.7 -5.11613 | overlap 1409665 CGCTTAACCTGGTGA TTTCT AAA AGAAG TTTTTTGCATGGTAT icd 1409888 - 1411138 + | isocitrate dehydrogenase, specific for NADP+; e14 prophage TERM 1938 1411161 - 1411185 + T 93 -10.7 -4.49981 | opp_overlap 1411164, overlap 1411164 ATGTGTTAAATATTT AAACGGGCGTG TTA TACGCCCGTTG TTTTATGATGATGTA TERM 1939 1411164 - 1411182 + T 100 -12.4 -4.35644 | opp_overlap 1411164, overlap 1411161 TGTTAAATATTTAAA CGGGCGTG TTA TACGCCCG TTGTTTTATGATGAT TERM 1940 1411182 - 1411164 - T 93 -11.7 -3.81137 | opp_overlap 1411164 1411161 TGTTAAATATTTAAA CGGGCGT GTTAT ACGCCCG TTGTTTTATGATGAT int 1412394 - 1411252 - | phage integrase TERM 1941 1411407 - 1411428 + g 72 -6.5 -4.39002 | opp_overlap 1411406 GCTGCTCATGAAATG TGGGCGCAG TTCC TTGCTCCCA TTTTATGCCACATTT ymfG 1412620 - 1412384 - | putative excisionase TERM 1942 1412712 - 1412754 + r 74 -2.2 -5.22289 | opp_overlap 1412714, overlap 1412695 1412713 1412714 1412716 1412720 TCTTGACTGGTCATA GAGATAAATTTAATGCTG AGAAATG CAGTATTGAATTTATCAA TTTTTCTATTTCCTG ECUMN_1383 1412999 - 1412760 - | conserved hypothetical protein from phage origin ECUMN_1384 1413265 - 1413047 - | conserved hypothetical protein from bacteriophage origin; putative Zn-finger, prokaryotic DksA/TraR C4 type; putative DnaK suppressor protein TERM 1943 1413341 - 1413327 - R 100 -7.8 -5.64873 | GCGAATAATAAAAAA GGAGCC TGT AGCTCC CTGATGATTTTGCTT ECUMN_1385 1413663 - 1413364 - | conserved hypothetical protein from bacteriophage origin; putative coiled coil TERM 1944 1413477 - 1413487 + g 71 -3.2 -4.82901 | GTACGCTACGGCAAA TGTC ATC GACG TTTTTATCCGGAAAC ECUMN_1386 1413847 - 1413656 - | conserved hypothetical protein from phage origin TERM 1945 1413936 - 1413918 - R 84 -9.5 -4.27117 | opp_overlap 1413914 1413918 TTTGGATAACAGAAA GGCCGGG AAATA CCCAGCC TCGCTTTGTAACGGA ECUMN_1387 1414679 - 1413999 - | exonuclease from phage origin TERM 1946 1414683 - 1414702 + r 74 -2.1 -5.27335 | overlap 1414672 GTCCGGTGTCATGCT GCCAC CTTCTGTTCA GTGGC TTTTTGTTTCAGGAA ECUMN_1388 1415461 - 1414676 - | Recombination protein bet from phage origin gam 1415883 - 1415467 - | Host-nuclease inhibitor protein gam from bacteriophage origin kil 1416107 - 1415838 - | Host killing protein from bacteriophage origin TERM 1947 1416161 - 1416146 - R 82 -6.8 -4.9755 | opp_overlap 1416146 1416145 ATACATAACGAAAAA CGCCTC GAGT GAAGCG TTATTGGTATGCGGT ECUMN_1391 1416555 - 1416187 - | Putative single-stranded DNA binding protein of prophage TERM 1948 1416603 - 1416582 - H 95 -8 -5.4251 | overlap 1416584 CTCACAGATAAAAAA TCGCCCTC ACATTG GAGGGCAA AGAAGATTTCCAATA TERM 1949 1416655 - 1416700 + H 100 -12.7 -4.29508 | TTTAGTTACGAGCGA CATTGCTCAGTGTATTCACTC GTTG GAATGAATACACAGTGCAGTG TTTATTAGTATGCCT TERM 1950 1416980 - 1416998 + G 76 -7.4 -4.25859 | overlap 1416977 1416982 AATCCTTCCTCATTA CTGGATGT ATT ACATCCTG TTGTTTTGCGTTAGC TERM 1951 1416982 - 1416996 + G 72 -8.6 -3.72228 | overlap 1416980 1416977 TCCTTCCTCATTACT GGATGT ATT ACATCC TGTTGTTTTGCGTTA ECUMN_1392 1416816 - 1417397 + | Superinfection exclusion protein B ECUMN_1393 1417806 - 1417414 - | putative regulatory protein N (modular protein) ECUMN_1394 1417981 - 1417808 - | hypothetical protein from bacteriophage origin TERM 1952 1418158 - 1418143 - R 100 -7.5 -5.50723 | opp_overlap 1418142 TGAGGAAAAGAAAAA CCGGC GCTGAG GCCGG GTATAATTATTTGAT ECUMN_1395 1419064 - 1418165 - | conserved hypothetical protein from bacteriophage origin cI 1419901 - 1419194 - | repressor protein of bacteriophage origin TERM 1953 1419815 - 1419793 - G 70 -5.4 -4.36903 | TGGACGAAAGAGAAA GGGCACGGGC TAT GGCCATTCCC CTACCATGTTCATCA cro 1419980 - 1420207 + | regulatory protein from bacteriophage origin TERM 1954 1420585 - 1420563 - g 100 -9.8 -5.52023 | opp_overlap 1420563 ATCACCAATAAAAAA CGCCCGGTGT GCA AGACCGAGCG TTCTGAACAAATCCA ECUMN_1398 1420314 - 1420613 + | Regulatory protein CII from phage origin TERM 1955 1421055 - 1421015 - g 85 -9.7 -4.27686 | opp_overlap 1421015, overlap 1421008 1421025 1421026 1421037 1421048 CAAAACGAGGGAAAA TCCCCTAAAACGAGGGATA AAA CATCCCTCAAATTGGGGGA TTGCTATCCCTCAAA TERM 1956 1421068 - 1421025 - g 81 -9 -4.14013 | gap 1, opp_overlap 1421015, overlap 1421015 1421026 1421037 1421048 GAAAATCCCCTAAAA CGAGGGATAAAACATCCCTCA AAT TGGGGGAT-TGCTATCCCTCA AAACAGGGGGACACA O 1420646 - 1421545 + | Replication protein from bacteriophage origin ECUMN_1400 1421542 - 1422243 + | putative replication protein P of bacteriophage ECUMN_1401 1422240 - 1422530 + | Ren protein from phage origin TERM 1957 1422557 - 1422578 + F 95 -8.7 -5.27335 | gap 1, opp_overlap 1422555 1422557 ACTGAGCTAATAACA GGCCTGCTGG TAA TC-GCAGGCC TTTTTATTTGGGGGA ECUMN_1402 1422586 - 1423044 + | recombination protein ninB from phage origin TERM 1958 1423091 - 1423101 + GF 75 -4.6 -4.7373 | overlap 1423083 1423081 GGACTGCTGGCAAAC GCCG CTT TGGC TTTTTGATGCACTGG ECUMN_1403 1422981 - 1423568 + | putative DNA N-6-adenine-methyltransferase from phage origin ECUMN_1404 1423702 - 1424085 + | conserved hypothetical protein, putative protein ninX from phage origin rusA 1424292 - 1424654 + | endonuclease RUS; DLP12 prophage ybcQ 1424862 - 1425254 + | putative antitermination protein Q homolog; DLP12 prophage TERM 1959 1425355 - 1425374 + T 100 -9.3 -5.9873 | TGTTCCCTGATTTAG CCAGCCT CCCCAA AGGCTGG TTTTTTTTCTAATAA blc 1425935 - 1425411 - | Outer membrane lipoprotein blc precursor (LIPOCALIN) from bacteriophage origin ECUMN_1408 1426128 - 1427087 + | Conserved Hypothetical protein from bacteriophage origin TERM 1960 1427613 - 1427627 + G 70 -3.6 -4.64676 | overlap 1427615 AATACACTCTCACCT TTTTCT GTA AGAAGA TTTTATTCAGCATAC TERM 1961 1427765 - 1427785 + G 100 -4 -5.65927 | TCTTGCTATTTTATC CTCGGAAA AAATG TTTCAGAG TTTTTTGTTTGGGTG ECUMN_1409 1427397 - 1428137 + | putative araC-type regulatory protein from bacteriophage origin TERM 1962 1428200 - 1428219 + F 100 -6.4 -5.56263 | TGATGCTTTCAGCTA CGCCAG AATAATCG CTGGCG TTTTTCTTTTCTAAT essD 1428305 - 1428520 + | putative phage lysis protein S; DLP12 prophage ybcS 1428520 - 1429017 + | putative lysozyme; DLP12 prophage rzpD 1429014 - 1429475 + | putative murein endopeptidase; DLP12 prophage TERM 1963 1429500 - 1429475 - T 89 -14.1 -2.90212 | overlap 1429460 1429477 TGAGCAGTGCAGATA GAGCTGCCCAT ATCG ATGGGCAACTC ATGCAATTATTGTGA TERM 1964 1429498 - 1429477 - T 76 -10.9 -3.002 | overlap 1429460 1429475 AGCAGTGCAGATAGA GCTGCCCAT ATCG ATGGGCAAC TCATGCAATTATTGT borD 1429800 - 1429507 - | putative lipoprotein; DLP12 prophage ynfO 1430354 - 1430160 - | conserved hypothetical protein; Qin prophage TERM 1965 1430503 - 1430517 + H 72 -5.8 -4.45517 | GTTGTGACATGTAGA TGATAA TTA TTATCA TTTTGTGGGTCCTTT TERM 1966 1430661 - 1430719 + H 100 -16.3 -4.06182 | opp_overlap 1430663 1430667, overlap 1430663 1430667 AAAATACCCCCTGAA AAGAAAGGAAACGACAGGTGCTGAAAG CGAGC TTTTTGGCCTCTGTCGTTTCCTTTCTC TGTTTTTGTCCGTGG TERM 1967 1430717 - 1430663 - H 91 -11.6 -4.09511 | opp_overlap 1430661 1430663 1430667, overlap 1430667 AATACCCCCTGAAAA GAAAGGAAACGACAGGTGCTGAAA GCGAGCT TTTTGGCCTCTGTCGTTTCCTTTC TCTGTTTTTGTCCGT TERM 1968 1430663 - 1430717 + H 100 -18.9 -3.61603 | opp_overlap 1430663 1430667, overlap 1430661 1430667 AATACCCCCTGAAAA GAAAGGAAACGACAGGTGCTGAAAG CGAGC TTTTTGGCCTCTGTCGTTTCCTTTC TCTGTTTTTGTCCGT TERM 1969 1430667 - 1430713 + H 100 -13.9 -4.40232 | opp_overlap 1430663 1430667, overlap 1430663 1430661 CCCCCTGAAAAGAAA GGAAACGACAGGTGCTGAAAG CGAGC TTTTTGGCCTCTGTCGTTTCC TTTCTCTGTTTTTGT TERM 1970 1430713 - 1430667 - H 79 -6.6 -4.64861 | opp_overlap 1430667 1430663 1430661, overlap 1430663 CCCCCTGAAAAGAAA GGAAACGACAGGTGCTGAAA GCGAGCT TTTTGGCCTCTGTCGTTTCC TTTCTCTGTTTTTGT nohB 1430743 - 1431288 + | DNA packaging protein; DLP12 prophage TERM 1971 1431954 - 1431966 + G 78 -7.7 -4.43681 | CAGCCAGTGAATCCC CGCAT TTT ATGCG TTTTCATGTTGCCTG TERM 1972 1432048 - 1432072 + G 70 -4.1 -4.60797 | opp_overlap 1432029 1432047 1432050, overlap 1432050 GTTTGGCCTCAAATG GACGCCGGATG ACC CCTCCAGCGTG TTTTATCTCTGCGAG TERM 1973 1432825 - 1432789 - g 95 -5.8 -5.33026 | gap 1, overlap 1432810 TAAGCGAAACAAAAA CGGGGTTTACCTTACCG AAAT CGGTACGG-ATACCGCG AAAGAGCAGATTTAT TERM 1974 1433003 - 1432989 - g 100 -5 -5.52986 | overlap 1432991 ATGGCAGGAAAAAAA TACTGT GGG ACAGCA AAAAGCGACGCAATG TERM 1975 1433001 - 1432991 - g 70 -5.4 -4.40552 | overlap 1432989 GGCAGGAAAAAAATA CTGT GGG ACAG CAAAAAGCGACGCAA TERM 1976 1433024 - 1433008 - g 73 -3.5 -4.8048 | opp_overlap 1433009, overlap 1433009 GTGGGACAGCAAAAA GCGACGC AAT GAGGCGC TCGACTGCTTCGTTT TERM 1977 1433165 - 1433145 - g 79 -4.6 -4.95167 | CAACCAACAAGAAAA CACTGGCA GATTA CGCCCGTG CCTTATCCGGAGAGG A 1431263 - 1433188 + | Terminase large subunit from bacteriophage origin W 1433185 - 1433391 + | Head-to-tail joining protein W (gpW) from bacteriophage origin TERM 1978 1433962 - 1433935 - g 74 -9.8 -3.42069 | gap 1, overlap 1433924 1433933 GCAACCCGAACAATA CCGGCGACAGCCG GAA CTGCCGT-GCCGG TGTGCAGATTAATGA TERM 1979 1434187 - 1434135 - g 70 -10.8 -2.71791 | gap 1, overlap 1434134 1434164 1434167 ACTCGCGGTGCAAAT GTGTTTTACAGCGTGATGGAGCA GATGAAGA TGCTCGA-CACGCTGCAGAACAC GCAGCTGCAGAGCGC TERM 1980 1434921 - 1434906 - g 82 -11.8 -3.53444 | opp_overlap 1434918 GCAGCCGGTCTTAAA CCGCCC GCCT GGGCGG CTGCGGCATTTGAAT B 1433388 - 1434989 + | Portal protein; minor capsid protein [Contains: Protein B*] from bacteriophage origin TERM 1981 1435039 - 1435054 + G 100 -7.5 -5.18371 | CCGCTGATGCTTGAA CCCGC CTATGC GCGGG TTTTCTTTTGTGCGC C 1434970 - 1436289 + | Minor capsid protein [Contains: Capsid assembly protein NU3] from bacteriophage origin D 1436293 - 1436631 + | Head decoration protein from bacteriophage origin TERM 1982 1436666 - 1436653 - f 70 -9.5 -2.87051 | opp_overlap 1436653, overlap 1436652 CCTTCATCACTAAAG GCCGC CTGT GCGGC TTTTTTTACGGGATT TERM 1983 1436653 - 1436666 + F 100 -9.5 -5.41746 | opp_overlap 1436653 1436652 CCTTCATCACTAAAG GCCGC CTGT GCGGC TTTTTTTACGGGATT E 1436660 - 1437712 + | Major head coat protein from bacteriophage origin TERM 1984 1437716 - 1437731 + G 95 -10.4 -4.64844 | opp_overlap 1437716 CAACTGGCGTAATCA TGGCCC TTCG GGGCCA TTTTCTCTCTGTGGA fI 1437715 - 1438149 + | DNA packaging protein from bacteriophage origin fII 1438161 - 1438514 + | Tail attachment protein from bacteriophage origin ECUMN_1424 1438526 - 1439104 + | Minor tail protein Z (GpZ) TERM 1985 1439154 - 1439188 + G 100 -10.6 -4.72272 | opp_overlap 1439156, overlap 1439157 ACTGGAGAAGCATGA CACCGGGGCGACGTTT TTT GATGGTCGCCCCGCTG TTTTTGATGAGGCGG TERM 1986 1439157 - 1439185 + G 72 -10.9 -2.98472 | opp_overlap 1439156, overlap 1439154 GGAGAAGCATGACAC CGGGGCGACGTTT TTT GATGGTCGCCCCG CTGTTTTTGATGAGG TERM 1987 1439210 - 1439221 + G 70 -7.2 -4.03234 | ATGAGGCGGATTTTC CGGC AGTT GCCG TTTATCTCACCGGCG ECUMN_1425 1439101 - 1439496 + | Minor tail protein U TERM 1988 1440153 - 1440116 - g 79 -2.6 -5.18371 | opp_overlap 1440145, overlap 1440117 1440118 GCGGATAAAACAAAA GCCACCGTGTCGGTCA GTGGTA TGACCATCACCGTGAA AGGTGTTGCTGCAGG ECUMN_1426 1439474 - 1440244 + | Major tail protein V TERM 1989 1440442 - 1440412 - g 87 -14 -3.03124 | GTTTACTGTGGAAGA CGCCATCAGAACCG GCG CGTTTCTGGTGGCG ATGTCCCTGTGGCAT ECUMN_1427 1440260 - 1440682 + | Minor tail protein G TERM 1990 1440828 - 1440855 + G 90 -9.2 -4.58395 | gap 1 GGATATGCACTTTTC CGGGCTGACGTAC ACC GTGC-TCAGCCTG TTTTTCAGCGATCCG ECUMN_1428 1440664 - 1441098 + | Minor tail protein T TERM 1991 1441234 - 1441209 - g 91 -5.3 -5.44119 | overlap 1441228 GTGATGCGAAAAAAA CAGCGGCAGTC GTTG AACAGTCGCTG AGCCGACAGGCGCTG TERM 1992 1442482 - 1442467 - g 81 -6.8 -4.60041 | AGCGACGCTGAAAAA GCCGAA GCAG TCCGGC GTGAAAGTGTCTGCG TERM 1993 1443012 - 1442959 - g 74 -2.9 -4.95155 | gap 1, overlap 1442977 GTCAGAGCAGAAAAA GACCTGGGCGGCTGAAGACCAGCTTC GCG GGAGCTGGATGGCAGGC-CTCAGGTC AGGCTGGAGTGAGTG ECUMN_1429 1441091 - 1443670 + | Minor tail protein precursor H TERM 1994 1443688 - 1443674 - g 72 -6.4 -4.30576 | GGTGGACGATGAAAA CCTTCC GCT GGAAAG TGAAACCGGGTATGG ECUMN_1430 1443667 - 1443996 + | Minor tail protein M TERM 1995 1444145 - 1444131 - g 80 -5.7 -4.94972 | opp_overlap 1444138 GAGCAGAACGAAAAA GGTGA GCCTG TCACC TGGCAGGGGCGGCAG TERM 1996 1444307 - 1444327 + G 90 -9.7 -4.42653 | overlap 1444309 CGGCGGAACGGTGGT CAGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT ECUMN_1431 1443996 - 1444694 + | Minor tail protein L TERM 1997 1444726 - 1444710 - gf 71 -9.5 -3.02649 | overlap 1444712 ATCCCATGACAGAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA TERM 1998 1445204 - 1445236 + GF 81 -9.7 -3.96298 | CAGGTGCCGTTGTCA GCGGCGCAGCCGGGC GAT GTGCTGCTGTGCTGC TTTGGTTCATCGGTG ECUMN_1432 1444700 - 1445443 + | putative tail fiber component K of prophage TERM 1999 1445929 - 1445944 + GF 73 -10.4 -3.00946 | opp_overlap 1445928 1445927, overlap 1445926 CTGTACGGTGAAATG CGCGTG GGGT CACGCG TGGTTTCTCAGGAGA ECUMN_1433 1445341 - 1446012 + | Tail assembly protein I TERM 2000 1446029 - 1446052 + F 71 -9.6 -3.01125 | opp_overlap 1446034, overlap 1446034 GCAAAATGTTTTATG TGAAACCGCC TCCG GGCGGTTTTG TCGTTTATGGAGCAT TERM 2001 1446047 - 1446034 - f 77 -9.5 -3.60098 | opp_overlap 1446029 1446034 ATGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTGTCGTTTATGG TERM 2002 1446034 - 1446047 + F 91 -9.5 -4.64846 | opp_overlap 1446034, overlap 1446029 ATGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTGTCGTTTATGG TERM 2003 1446223 - 1446203 - g 90 -7.5 -4.7497 | TGGATGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CGGTGCTGGACAGTG TERM 2004 1448506 - 1448519 + G 79 -4.5 -5.00616 | overlap 1448490 CCGAGTGATGATGCA TCCGG CTAT CTGGA TTTTTTCAAAGGCGA TERM 2005 1448679 - 1448668 - g 74 -5.8 -4.45068 | ACCGTCAATAAGAAA CTGG AAGA CCAG AGTGCGGCAATTCAG ECUMN_1434 1446073 - 1449555 + | Host specificity protein J of prophage TERM 2006 1449575 - 1449592 + F 100 -11.3 -5.72622 | opp_overlap 1449565 TAAAACCCAAATTCG GGCACCA GAAA TGGTGCC TTTTTTATTTGTGGA TERM 2007 1449754 - 1449739 - f 73 -6.1 -4.36914 | GGTGGCCTCAGAAAA TCCGG ATGAAG CCGGA CGTTACAGCATGGAT TERM 2008 1450182 - 1450154 - f 74 -9.6 -3.28712 | overlap 1450157 1450170 GCCCGTGCGTCAGAA GAAGCCTCCGCA GACAG TGAAGAGGCTTC CCGCCGTAATGCAGA TERM 2009 1450251 - 1450235 - f 72 -5.8 -4.46212 | gap 1, overlap 1450236 1450237 GTCGCCACCACAAAA GC-GCGG GAGG CCGCAGC AGACGCAACAAAGGC TERM 2010 1450641 - 1450621 - f 74 -7.7 -4.04719 | AGGACAGAGGACAAA TTATCTGAG GAA CTCAAATAA ACCAGACTCATGGAC TERM 2011 1450806 - 1450818 + F 78 -6.3 -4.7254 | overlap 1450790 TCCCGCTGGCAAGTG GTGAA TGT TTCAC TTTTTCGTGCCGGGT ECUMN_1436 1451632 - 1451910 + | conserved hypothetical protein from phage origin ECUMN_1437 1451923 - 1452216 + | hypothetical protein sitD 1453165 - 1452308 - | iron transport protein, inner membrane component TERM 2012 1452337 - 1452347 + g 81 -6.8 -4.68424 | ACAGATCCTGTGTAT GGGA GTT TCCC TTTTTGCGTGCGTTG sitC 1454019 - 1453162 - | iron transport protein, inner membrane component TERM 2013 1453225 - 1453212 - G 74 -8.1 -4.10161 | GACGATTTGCCAAAA GCCCA TGGG TGGGC GCAAAGACAAATGCT sitB 1454843 - 1454016 - | iron transport protein, ATP-binding component sitA 1455757 - 1454843 - | iron transport protein, periplasmic-binding protein TERM 2014 1455808 - 1455793 - H 80 -7.6 -4.4522 | opp_overlap 1455793, overlap 1455802 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCACAGCC TERM 2015 1455793 - 1455808 + H 77 -7.6 -4.36914 | opp_overlap 1455793 1455802 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCACAGCC ECUMN_1442 1456445 - 1457215 + | hypothetical protein TERM 2016 1457480 - 1457457 - g 93 -13.2 -3.65314 | AACTGAGACACATAA GGCCTCGCAA TGGC TTGCAAGGCC ACACATGTATTGAGA ECUMN_1443 1457338 - 1457493 + | hypothetical protein TERM 2017 1457647 - 1457626 - T 74 -3.9 -4.96657 | ACAAAGACAAGAAAA TAATATTTA TGAT TAAATATCA GCGAGTTGAATACAT TERM 2018 1457862 - 1457886 + T 93 -10 -5.05113 | opp_overlap 1457865, overlap 1457865 ATGTGTTAAATATTG AAACGGGCGT ATAAC ACGCCCGTTG TTTTATTTATGTGGA TERM 2019 1457865 - 1457883 + T 100 -11.7 -4.60302 | opp_overlap 1457865, overlap 1457862 TGTTAAATATTGAAA CGGGCGT ATAAC ACGCCCG TTGTTTTATTTATGT TERM 2020 1457883 - 1457865 - T 100 -12.4 -3.81137 | opp_overlap 1457865 1457862 TGTTAAATATTGAAA CGGGCGTA TAA CACGCCCG TTGTTTTATTTATGT elbA 1458265 - 1457942 - | conserved hypothetical protein associated with lycopene formation TERM 2021 1458373 - 1458359 - R 71 -2.2 -5.04249 | TCCCCAAAAAACAAA TTAATC AAA AATTAA AACCATTGTTTATAT TERM 2022 1458728 - 1458754 + r 76 -6.5 -4.51799 | opp_overlap 1458732, overlap 1458732 TGTGCGTTAAGTATT GAAACGGGCGT ATGGC ACGCCCGTTGG TTTTATAAATTTGCT TERM 2023 1458732 - 1458750 + r 93 -11.7 -3.76789 | opp_overlap 1458732, overlap 1458728 CGTTAAGTATTGAAA CGGGCGT ATGGC ACGCCCG TTGGTTTTATAAATT TERM 2024 1458750 - 1458732 - R 100 -12.4 -3.71527 | opp_overlap 1458732 1458728 CGTTAAGTATTGAAA CGGGCGTA TGG CACGCCCG TTGGTTTTATAAATT ycgX 1459372 - 1458968 - | hypothetical protein TERM 2025 1459027 - 1459039 + g 70 -5.5 -4.3953 | GCGTATTATCAATGG CGTAG TAA CTGCG TTTGTTATGATTAAC TERM 2026 1459376 - 1459363 - G 75 -6.7 -4.31587 | overlap 1459360 TTTGAAAAACAACAA CCTGA TCCA TCAGG ATAATAACCTCTTGT ycgE 1460324 - 1459593 - | putative DNA-binding transcriptional regulator TERM 2027 1460410 - 1460375 - R 75 -9.3 -3.70109 | TACACGACCCAATAA TACTTTGTACAATAT ACGCTA AAATTGTACAAAGTA TAAATAAGATTTCAG ycgF 1461740 - 1460529 - | putative cyclic-di-GMP phosphodiesterase; blue-light sensing protein using FAD (BLUF) ycgZ 1462054 - 1462290 + | hypothetical protein ymgA 1462333 - 1462605 + | hypothetical protein ymgB 1462634 - 1462900 + | hypothetical protein ymgC 1463013 - 1463261 + | hypothetical protein ECUMN_1453 1463737 - 1463564 - | hypothetical protein ymgF 1465252 - 1465470 + | hypothetical protein ECUMN_1456 1465618 - 1465475 - | hypothetical protein ECUMN_1458 1465870 - 1466853 + | conserved hypothetical protein; putative exported protein TERM 2028 1467977 - 1467960 - g 82 -3.4 -5.20216 | gap 1, overlap 1467970 GACATCAGTAAAAAA GGCG-CA TACAT TGACGCC TGGGCGCAATATAGC ECUMN_1459 1466883 - 1468532 + | hypothetical protein TERM 2029 1468575 - 1468549 - T 100 -16.7 -4.18018 | opp_overlap 1468547 1468544 CCCCGTTAGCTAAAA TACCGCGTCGA ATTCA TCGACGCGGTA ACATATTAAATATTA ymgD 1468917 - 1468588 - | hypothetical protein ymgG 1469202 - 1468927 - | hypothetical protein TERM 2030 1469572 - 1469586 + H 77 -3.6 -5.18371 | AATATTTATCAGCAA TGATTA CAT TAGTCA TTTTATTTTGTCGAC ECUMN_1462 1469748 - 1470191 + | hypothetical protein TERM 2031 1470222 - 1470207 - T 80 -10.4 -3.85704 | opp_overlap 1470207 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGG TERM 2032 1470207 - 1470222 + T 89 -10.4 -4.54727 | opp_overlap 1470207 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGG TERM 2033 1470265 - 1470253 - T 73 -2.7 -5.0925 | TGTTAAAAGGAAAAA TTCTG CGG CAAAA AAAGCCCGCCAGTTA TERM 2034 1470288 - 1470269 - T 91 -7 -5.40072 | overlap 1470270 TCTGCGGCAAAAAAA GCCCGCCA GTTA CGGCGGGA AACCTCATCCTATGG TERM 2035 1470287 - 1470270 - T 80 -10.5 -3.83561 | overlap 1470269 CTGCGGCAAAAAAAG CCCGCCA GTTA CGGCGGG AAACCTCATCCTATG TERM 2036 1470531 - 1470504 - T 95 -10.6 -4.72986 | overlap 1470505 1470506 1470509 1470520 GAGGGGGATGAAAAA CGCAAGGCAGAG ATGA CTCTGCCTTGAA GAGAAATGCGCTTTT TERM 2037 1470530 - 1470505 - T 88 -11.9 -3.4331 | overlap 1470504 1470506 1470509 1470520 AGGGGGATGAAAAAC GCAAGGCAGAG ATGA CTCTGCCTTGA AGAGAAATGCGCTTT TERM 2038 1470529 - 1470506 - T 93 -15.4 -2.65504 | overlap 1470505 1470504 1470509 1470520 GGGGGATGAAAAACG CAAGGCAGAG ATGA CTCTGCCTTG AAGAGAAATGCGCTT TERM 2039 1470526 - 1470509 - T 85 -11.3 -3.47218 | overlap 1470506 1470505 1470504 1470520 GGATGAAAAACGCAA GGCAGAG ATGA CTCTGCC TTGAAGAGAAATGCG minE 1470822 - 1470556 - | cell division topological specificity factor minD 1471638 - 1470826 - | membrane ATPase of the MinC-MinD-MinE system minC 1472357 - 1471662 - | cell division inhibitor TERM 2040 1472030 - 1472045 + g 74 -2.4 -5.04222 | overlap 1472032 GAGCCTGCGGTGCGG GAGCTG GACG CGGCGC TTTTTCCTTTCCTTC ycgJ 1472877 - 1473245 + | hypothetical protein TERM 2041 1473322 - 1473336 + T 77 -11.4 -2.56046 | overlap 1473314 1473313 1473308 CGTTAACGTTTATGA CGGGGA GAG TCCCCG TCGGTTGACATTTAC ycgK 1473749 - 1473348 - | hypothetical protein ycgL 1473957 - 1474283 + | hypothetical protein ycgM 1474355 - 1475014 + | putative isomerase/hydrolase ycgN 1475106 - 1475552 + | hypothetical protein hlyE 1476670 - 1475759 - | hemolysin E umuD 1477042 - 1477461 + | DNA polymerase V, subunit D umuC 1477461 - 1478729 + | DNA polymerase V, subunit C TERM 2042 1478766 - 1478749 - T 100 -12.7 -5.14965 | opp_overlap 1478745 AGTGGCAGGAAAAAA GCGCTCC CGCA GGAGCGC TGAATGGATTAGCGA dsbB 1479305 - 1478775 - | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I TERM 2043 1478932 - 1478899 - G 81 -4.5 -5.1287 | gap 1, overlap 1478901 TCCAGACCTAAAAAA TC-CCACTGACGCTCG GCG CAATCGCCAGAGGCGA CAAACACTTGCGGCA TERM 2044 1479417 - 1479444 + r 79 -9.8 -3.79113 | opp_overlap 1479415 1479421, overlap 1479421 TATCGGGCGAAAAGG CAAACCGGGCAT TTAT ATGCCCGGTAAG TTGTTATCAAAGCGT TERM 2045 1479421 - 1479440 + r 86 -13.6 -2.68806 | opp_overlap 1479415 1479421, overlap 1479417 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA TERM 2046 1479440 - 1479421 - R 100 -13.6 -3.92659 | opp_overlap 1479421 1479417, overlap 1479415 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA nhaB 1480992 - 1479451 - | sodium:proton antiporter TERM 2047 1479934 - 1479916 - G 80 -5.3 -4.88736 | gap 1 GACTACCGAGAAAAA CACCGTCA ACAG TG-CGGTG AATGGCAGAGATTCG fadR 1481214 - 1481933 + | DNA-binding transcriptional dual regulator of fatty acid metabolism TERM 2048 1481976 - 1481951 - T 76 -6.1 -4.56597 | opp_overlap 1481956, overlap 1481956 CCTTCCGTTTAAAAA GCAAACCCCTC AAAC GAGGGGTTTTT GTTGTTTTTACAGAT TERM 2049 1481971 - 1481956 - T 87 -10.4 -4.32046 | opp_overlap 1481956, overlap 1481951 CGTTTAAAAAGCAAA CCCCTC AAAC GAGGGG TTTTTGTTGTTTTTA TERM 2050 1481956 - 1481971 + T 100 -10.4 -5.51353 | opp_overlap 1481951 1481956 CGTTTAAAAAGCAAA CCCCTC AAAC GAGGGG TTTTTGTTGTTTTTA ycgB 1483516 - 1481984 - | hypothetical protein TERM 2051 1482927 - 1482939 + g 76 -4.1 -5.01732 | TGCCGGGCTTTCTCT TCTTG CAG CGAGA TTTTTTGCGGGCGTT dadA 1483846 - 1485144 + | D-amino acid dehydrogenase dadX 1485154 - 1486224 + | alanine racemase 2, PLP-binding TERM 2052 1486331 - 1486357 + T 100 -13.2 -3.53224 | opp_overlap 1486333 AGCCATTTCCCATGA TAGTGTCCATTA CAA TGATGGACACTA TTTCCCCGGAACCTG ECUMN_1480 1487828 - 1486392 - | hypothetical protein ECUMN_1481 1488154 - 1488375 + | hypothetical protein cvrA 1490213 - 1488477 - | putative cation/proton antiporter ldcA 1491222 - 1490308 - | L,D-carboxypeptidase A emtA 1491322 - 1491933 + | lytic murein endotransglycosylase E ycgR 1492669 - 1491935 - | protein involved in flagellar function ymgE 1492870 - 1493124 + | putative inner membrane protein with transglycosylase-associated domain TERM 2053 1493167 - 1493136 - T 74 -9.4 -3.33583 | opp_overlap 1493137, overlap 1493137 ATAAGATTTTCATAA GGCGGATAGCGATA CAGA TGCCGCTATCCGCT TTCACATCAGAACGT TERM 2054 1493166 - 1493137 - T 84 -12.9 -2.59668 | opp_overlap 1493137, overlap 1493136 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 2055 1493137 - 1493166 + T 100 -12.9 -3.59979 | opp_overlap 1493137 1493136 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG prrA 1495165 - 1493174 - | putative outer membrane receptor, probably tonB dependent TERM 2056 1493319 - 1493338 + g 71 -2.7 -4.83615 | overlap 1493323 TCGGCTCGAATGTGG GTCACCG CAAAAC CGGCGGC TTTTTGTGAACCGTC TERM 2057 1494190 - 1494202 + g 100 -4.7 -5.93252 | opp_overlap 1494190 TGTAATCGGAATAAT GGCTG TAG CTGCC TTTTTTATTTTTCAA TERM 2058 1494336 - 1494364 + g 72 -4.6 -4.59511 | gap 1 TAAAAACTTTCTTTG TCATACT-CTGGC CACT GCCAGTAGCGTGA TTTTTGACCACTATT modD 1496024 - 1495170 - | putative pyrophosphorylase modD ECUMN_1489 1496833 - 1496021 - | conserved hypothetical protein, putative SAM-dependent methyltransferase ECUMN_1490 1497739 - 1496843 - | putative ABC transporter, ATP-binding protein TERM 2059 1497365 - 1497337 - GR 74 -2.4 -5.1166 | gap 2, opp_overlap 1497358 CACTAAAAGCAAAAA TGCCGTCGTGCGCC TGC GGCACCC-A-GGCA ATAGCCTGCGCGCGC ECUMN_1491 1498578 - 1497598 - | putative ABC transporter permease protein TERM 2060 1498439 - 1498456 + gr 89 -8.5 -4.63218 | opp_overlap 1498438 TGCCAGAAGACAATT TGTTCCT GCAC AGGAACA TTTTCTTGACGCAGA ECUMN_1492 1499642 - 1498578 - | putative ABC transporter periplasmic binding protein TERM 2061 1499649 - 1499624 - G 72 -5.5 -4.48987 | overlap 1499625 TCCTGATAATTAAAA CCGCTATATAC TTAC ACATATAGCGA AAAAGATCATGTTTG TERM 2062 1499914 - 1499878 - R 87 -8.2 -5.00616 | gap 1 TTCGTGGCGAAAAAA GAGCAATGCCAATTTTA TGCA CATAAT-GGCATTGCTC GATATACAGCAAAGT TERM 2063 1499931 - 1499949 + r 79 -3 -5.45802 | opp_overlap 1499933, overlap 1499933 ATATACAGCAAAGTT AAGGCGTA GGT TCCGCCTC TTTTTGTTTTACCGG TERM 2064 1499933 - 1499947 + r 70 -5.6 -4.3613 | opp_overlap 1499933, overlap 1499931 ATACAGCAAAGTTAA GGCGTA GGT TCCGCC TCTTTTTGTTTTACC treA 1501626 - 1499929 - | periplasmic trehalase TERM 2065 1501914 - 1501888 - R 71 -4.5 -4.67755 | gap 1, opp_overlap 1501905, overlap 1501905 1501906 ACAGGTAGTTAAAAA CATCCGTGCA GAGTAAAT TGC-CGGATG ACATCAGAATGATGC TERM 2066 1501937 - 1501906 - R 70 -9.6 -2.89602 | gap 1, opp_overlap 1501905 1501929, overlap 1501888 1501905 CCGTGCAGAGTAAAT TGCCGGATGACATCA GAA TGATGCCATCCGA-A CGGTGGTTTAACCCT dhaH 1503363 - 1501945 - | fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component TERM 2067 1502850 - 1502835 - G 74 -8.2 -4.00066 | overlap 1502838 TCGATAAGGTATAAA CCAGCC GGGA GGCCGG ACGTACATGCAGGCC dhaL 1504006 - 1503374 - | dihydroxyacetone kinase, C-terminal domain dhaK 1505087 - 1504017 - | dihydroxyacetone kinase, N-terminal domain TERM 2068 1505202 - 1505222 + H 70 -9.9 -2.97934 | opp_overlap 1505202 1505201 1505204, overlap 1505204 AAAATTAGCCCAAAT TATGTTTCA TAG TGAAACATA TGCTTTAATGAATGT TERM 2069 1506196 - 1506208 + G 79 -4.7 -4.90302 | opp_overlap 1506196 ACCGATAATAGAAAC GCAGG GAA CCAGC TTTATTTTGTTGCTC dhaR 1505315 - 1507234 + | DNA-binding transcriptional regulator, dihydroxyacetone metabolism ycgV 1510201 - 1507334 - | putative adhesin; putative autotransporter TERM 2070 1508974 - 1508999 + g 72 -11.9 -2.50016 | opp_overlap 1508971 1508974, overlap 1508973 1508971 TACTCATATCAATGA CCAGATCGCTC GTGA GATCGATCTGG CTGTTGGTCATGGCA TERM 2071 1508999 - 1508974 - G 73 -11.9 -2.82023 | opp_overlap 1508974 1508973 1508971, overlap 1508971 TACTCATATCAATGA CCAGATCGCTC GTGA GATCGATCTGG CTGTTGGTCATGGCA TERM 2072 1510963 - 1510990 + r 79 -11.4 -3.10537 | opp_overlap 1510968, overlap 1510968 GGACTCGGTAAAATG AAAAATCCACGC AATT GCGTGGATTTTA TATACTTTTGCGCTC TERM 2073 1510968 - 1510985 + r 100 -11.3 -4.6709 | opp_overlap 1510968, overlap 1510963 CGGTAAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG TERM 2074 1510985 - 1510968 - R 100 -11.3 -5.0925 | opp_overlap 1510963 1510968 CGGTAAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG ychF 1512137 - 1511046 - | putative GTP-binding protein TERM 2075 1511602 - 1511616 + g 70 -7.1 -4.11216 | CTTAAATCCAGCGCG CGCAG CATAC CTGCG TTTTCCAGCTGCGGC TERM 2076 1511676 - 1511687 + g 72 -5.8 -4.38927 | TTTCGCGTCTTTATC GCCA CCTT TGGC TTTCTTCTGTACGCG pth 1512838 - 1512254 - | peptidyl-tRNA hydrolase TERM 2077 1512924 - 1512908 - H 74 -2.2 -5.24129 | CCGCTTGACAAAAAA CTGCGT ATCAA ATGCAG ATAACGCAATAATTG ychH 1513116 - 1513394 + | conserved hypothetical protein; putative inner membrane protein TERM 2078 1513411 - 1513440 + T 78 -11.5 -2.87963 | overlap 1513411 AAATAATGCAGTTTG CTGACCAGTCAGT TTGC GCTGACTGGTCAA TCTCGTACTTATAAA ychM 1515128 - 1513449 - | putative transporter TERM 2079 1515221 - 1515234 + r 74 -9.5 -3.34894 | opp_overlap 1515221, overlap 1515219 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT TERM 2080 1515234 - 1515221 - R 100 -9.5 -5.76633 | opp_overlap 1515221 1515219 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT prsA 1516200 - 1515253 - | phosphoribosylpyrophosphate synthase TERM 2081 1516331 - 1516317 - R 78 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAACTCAGCTTGCC ispE 1517202 - 1516351 - | 4-diphosphocytidyl-2-C-methylerythritol kinase lolB 1517825 - 1517202 - | chaperone for lipoproteins TERM 2082 1517428 - 1517453 + g 73 -9.1 -3.5882 | CACTGGCGCAAGCTG TTGAGCGGAAT TGGC ATTCCGGTCAA TTTGCCAATCATCTC hemA 1518039 - 1519295 + | glutamyl tRNA reductase TERM 2083 1519965 - 1520005 + G 72 -9.8 -3.33037 | gap 1, opp_overlap 1519960 1519975, overlap 1519974 AATGCCAGAACTGCC TGACGCAGAACTGCCGG ACATCAAC CCGGCAGATTTGCG-CA TTGATACTTTCCGCT TERM 2084 1519996 - 1519975 - g 72 -10.1 -3.35679 | opp_overlap 1519974 1519965 CTGCCTGACGCAGAA CTGCCGGAC ATCA ACCCGGCAG ATTTGCGCATTGATA TERM 2085 1520203 - 1520191 - g 70 -6.2 -4.26189 | GCAGAAATGGCAAAA CGGC AACAG GCCG AAGCGTCTACCCGTC prfA 1519336 - 1520418 + | peptide chain release factor RF-1 TERM 2086 1521234 - 1521218 - g 72 -10.1 -3.31792 | GGACTATGGTGATAA CGAGCGC GTA ACGCTCG GCCGCTATTATCAAT prmC 1520418 - 1521251 + | N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 ychQ 1521248 - 1521640 + | putative membrane protein; putative component of transcriptional regulator TERM 2087 1521936 - 1521953 + G 78 -5.5 -4.79352 | ATCGACAGGGCAGTG CGGTATC ATTA GGTGCCG TTTTATTATGGGTCG ychA 1521644 - 1522453 + | putative transcriptional regulator kdsA 1522489 - 1523343 + | 3-deoxy-D-manno-octulosonate 8-phosphate synthase TERM 2088 1523366 - 1523388 + T 100 -10.6 -5.14563 | opp_overlap 1523366 TGCTTGAAAACTAAA GCCTTAGCGT TCT GCGTTAAGGC TTTTTTCATGGGGCC TERM 2089 1523388 - 1523366 - T 76 -7.7 -4.19735 | opp_overlap 1523366 TGCTTGAAAACTAAA GCCTTAGCG TTCTG CGTTAAGGC TTTTTTCATGGGGCC TERM 2090 1523441 - 1523416 - T 100 -13.3 -5.36441 | opp_overlap 1523415 1523414 1523435 GCCGGATACAAAAAA GGCCGCAGG CTGTTACT CCTGCGGCC GGTTTCGGGCGCATA TERM 2091 1523447 - 1523482 + T 74 -7.5 -4.21768 | gap 1, overlap 1523435 TCCTGCGGCCGGTTT CGGGCG-CATATTGCC ATCAC GGCAGCCTGACGCCCG TTTTCACCTTACTTC ldrB 1523598 - 1523491 - | toxic polypeptide, small TERM 2092 1523664 - 1523705 + r 91 -10.1 -4.78848 | gap 1, opp_overlap 1523663, overlap 1523628 1523627 CTGGTTCAAGATTAG CCCCCGTTCTGTTGTCAGGT TAT ACCTCTCAAC-GTGCGGGGG TTTTCTCTTTCCAGC TERM 2093 1523976 - 1523951 - R 100 -13.3 -5.59879 | opp_overlap 1523950 1523949 1523970 GATAAAGACAAAAAA GGCCGCAGG CTGTTACC CCTGCGGCC GGTTTCGGGCGCATA TERM 2094 1523982 - 1524017 + r 74 -7.5 -4.21768 | gap 1, overlap 1523970 CCCTGCGGCCGGTTT CGGGCG-CATATTGCC ATCAC GGCAGCCTGACGCCCG TTTTCACCTTACTTC ldrB 1524193 - 1524026 - | small toxic polypeptide TERM 2095 1524200 - 1524241 + r 91 -10.1 -4.78848 | gap 1, opp_overlap 1524199, overlap 1524163 1524162 ATGGTTCAAGATTAG CCCCCGTTCTGTTGTCAGGT TTT ACCTCTCAAC-GTGCGGGGG TTTTCTCTTTCCAGC TERM 2096 1524530 - 1524502 - R 74 -11.1 -2.67209 | CAGGAATTTATATTA TCTCCCCCGAT TTCTGTC ATCGGAGGAGA TATAACTGTCAGGCA chaA 1525639 - 1524539 - | calcium/sodium:proton antiporter TERM 2097 1526050 - 1526029 - g 72 -6.5 -4.30253 | overlap 1526032 TATAAAGATAAAGAA GATCGGCGT GATG ACGCCAGTC GCGAAGAAACCGCGC chaB 1525909 - 1526139 + | putative conserved cation transport regulator TERM 2098 1526252 - 1526240 - f 71 -4.1 -4.7871 | AATGAGCAGTAAAAA TGTCC GGA AGACA CCAAAAAGTTGTCGC chaC 1526276 - 1526992 + | regulatory protein for cation transport ychN 1527389 - 1527036 - | hypothetical protein ychP 1527716 - 1528969 + | putative adhesin/invasin narL 1529620 - 1528970 - | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) narX 1531409 - 1529613 - | sensory histidine kinase in two-component regulatory system with NarL TERM 2099 1529687 - 1529664 - G 70 -6 -4.15044 | gap 1, opp_overlap 1529664 TTTTTCGGGAATAAA GGTGACCACCA CTT CGGT-GCCACC TGATTCACGACGGCG TERM 2100 1530194 - 1530169 - G 74 -8.3 -3.92542 | TGCATCTGTAAACAA CTCACCTGCAT CTTC ATGCAAGAGAG AGATTGGGCAATAGA TERM 2101 1530376 - 1530352 - G 79 -12.1 -3.04792 | TGATCATGGCTAAGA TGACGCCCCTG CGG CAGGGTCGCCA GCAAAATACCGTACT TERM 2102 1531615 - 1531597 - H 74 -5.4 -4.60487 | opp_overlap 1531573, overlap 1531599 CAGCACCGTGAAAAA TCTCATAA TTT TTATGAAA TCACTGTACTCACTA TERM 2103 1531934 - 1531944 + G 81 -6.8 -4.67038 | opp_overlap 1531934 GTTGCGGTGAACTTA CCGA AAG TCGG TTTTAATTTTACGAC narK 1531748 - 1533139 + | nitrate/nitrite transporter TERM 2104 1533163 - 1533181 + F 100 -12.4 -6.06529 | ATTTGATTATCCTTT GCGCGGCA TGA TGTCGCGC TTTTTTTTATCTGTC TERM 2105 1533820 - 1533801 - g 76 -10.6 -3.32769 | opp_overlap 1533819, overlap 1533794 CTGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG TGCCAGCTACTCCTG TERM 2106 1535935 - 1535948 + G 72 -6.7 -4.1552 | ACGACATGAATACTT CGGAT ATGC ATCCG TTTATTCACCCGCTG narG 1533534 - 1537277 + | nitrate reductase 1, alpha subunit TERM 2107 1537371 - 1537357 - g 75 -5.6 -4.60041 | AGTTACCTGTAAAAA CGTCTG GAC CAGCCG CGAAGGCGTGGAATA narH 1537274 - 1538812 + | nitrate reductase 1, beta (Fe-S) subunit TERM 2108 1538946 - 1538920 - g 73 -9.5 -3.5771 | opp_overlap 1538925, overlap 1538910 1538923 AAAAATCTGTCGAAA GAAGATGCCCA TGCGC TGGGCATTTTC CTGCGCGATTTAACG TERM 2109 1538925 - 1538941 + G 76 -8 -4.25848 | opp_overlap 1538923 1538920 1538910 TCTGTCGAAAGAAGA TGCCCA TGCGC TGGGCA TTTTCCTGCGCGATT narJ 1538809 - 1539519 + | molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 narI 1539519 - 1540196 + | nitrate reductase 1, gamma (cytochrome b(NR)) subunit TERM 2110 1540218 - 1540233 + F 100 -11.8 -5.24129 | opp_overlap 1540218 TTTAGTTTGCATAGA CCCCGC TTCG GCGGGG TTTTTTATGGGCACG TERM 2111 1540233 - 1540218 - f 80 -11.8 -2.87931 | opp_overlap 1540218 TTTAGTTTGCATAGA CCCCGC TTCG GCGGGG TTTTTTATGGGCACG TERM 2112 1540428 - 1540446 + F 76 -8.8 -3.92075 | overlap 1540417 1540429 GCTTCACCCTTCGGG TCGTTGCC TGC GGCAACGC TTTCTCGCTGGCGCT TERM 2113 1540429 - 1540445 + F 82 -12.3 -2.94924 | overlap 1540417 1540428 CTTCACCCTTCGGGT CGTTGCC TGC GGCAACG CTTTCTCGCTGGCGC ECUMN_1528 1540555 - 1541004 + | hypothetical protein purU 1541942 - 1541100 - | formyltetrahydrofolate hydrolase TERM 2114 1541145 - 1541133 - G 77 -6.9 -4.44448 | ATTACCGTAAACAAA GACGC GCT GCGCC AGTACTTTGTAGAGT ychJ 1542450 - 1541992 - | hypothetical protein rssA 1542563 - 1543468 + | putative esterase of the alpha-beta hydrolase superfamily rssB 1543560 - 1544573 + | response regulator of RpoS TERM 2115 1545399 - 1545387 - g 71 -3.3 -4.77757 | GTTGAAAAACCAAAA GCGGA TGT TGCGC CGTCTAATCTCGCTA TERM 2116 1545476 - 1545466 - g 70 -4.6 -4.56597 | CGTTGCTGGCAAAAA CCCC TCC GGGA GCTGGTGATGAAATT galU 1544775 - 1545683 + | glucose-1-phosphate uridylyltransferase TERM 2117 1545731 - 1545710 - f 80 -10.1 -3.76402 | opp_overlap 1545710, overlap 1545687 ATGTTATCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTGTGCACAG TERM 2118 1545710 - 1545731 + F 100 -12.3 -5.60993 | opp_overlap 1545687 1545710 ATGTTATCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTGTGCACAG TERM 2119 1545769 - 1545751 - gf 100 -16 -4.52589 | TTTGTGCACAGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC ECUMN_1534 1545737 - 1545925 + | hypothetical protein ECUMN_1535 1545831 - 1546340 + | transposase IS605 family, IS200 group TERM 2120 1546415 - 1546447 + T 91 -11.3 -4.02856 | opp_overlap 1546422, overlap 1546419 1546421 1546422 CCTTATAGGCGCATT TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATAGCTTATTCT TERM 2121 1546419 - 1546443 + T 89 -9.9 -4.59089 | opp_overlap 1546422, overlap 1546415 1546421 1546422 ATAGGCGCATTTGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATAGCTTA TERM 2122 1546421 - 1546441 + T 100 -12.5 -3.89305 | opp_overlap 1546422, overlap 1546419 1546415 1546422 AGGCGCATTTGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATAGCT TERM 2123 1546440 - 1546422 - T 100 -16 -4.62069 | opp_overlap 1546422 1546421 1546419 1546415 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATAGC TERM 2124 1546422 - 1546440 + T 100 -16 -2.92499 | opp_overlap 1546422, overlap 1546421 1546419 1546415 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATAGC TERM 2125 1546518 - 1546488 - T 100 -15.6 -3.39668 | opp_overlap 1546495, overlap 1546495 TCTTAAACCGGACAA TAAAAAATCCCGCC GAT GGCGGGATTTTTAA GCAAGTGCAATCTAC TERM 2126 1546511 - 1546495 - T 100 -13.7 -5.55769 | opp_overlap 1546495, overlap 1546488 CCGGACAATAAAAAA TCCCGCC GAT GGCGGGA TTTTTAAGCAAGTGC TERM 2127 1546495 - 1546511 + T 100 -13.7 -4.57569 | opp_overlap 1546488 1546495 CCGGACAATAAAAAA TCCCGCC GAT GGCGGGA TTTTTAAGCAAGTGC hns 1546953 - 1546540 - | global nucleic acid-binding transcriptional dual regulator H-NS TERM 2128 1546617 - 1546631 + g 77 -7.1 -4.55128 | CAGCTGGAGTACGGC CCTGG CCAGT CCAGG TTTTAGTTTCGCCGT tdk 1547557 - 1548174 + | thymidine kinase/deoxyuridine kinase TERM 2129 1548450 - 1548433 - T 100 -10.5 -6.09196 | opp_overlap 1548433 GGTAAAACAAAAAAA CGGCCCC AGAA GGGACCG TTTATGTTGCCAGAC TERM 2130 1548433 - 1548450 + T 80 -8.3 -4.1891 | opp_overlap 1548433 GGTAAAACAAAAAAA CGGCCCC AGAA GGGACCG TTTATGTTGCCAGAC TERM 2131 1548481 - 1548494 + T 80 -4.5 -5.28826 | opp_overlap 1548481 AGCGCTACTGATTAA GCGGA TTTC TTCGC TTTTTTCTCAGCTTT adhE 1551152 - 1548477 - | fused acetaldehyde-CoA dehydrogenase ; iron-dependent alcohol dehydrogenase ; pyruvate-formate lyase deactivase TERM 2132 1548511 - 1548521 + g 88 -8.2 -4.64763 | overlap 1548514 TTTTTCTCAGCTTTA GCCG GAG CGGC TTCTTTTTTCGCTGC TERM 2133 1548514 - 1548524 + g 77 -3.2 -5.09225 | overlap 1548511 TTCTCAGCTTTAGCC GGAG CGG CTTC TTTTTTCGCTGCAGT TERM 2134 1551323 - 1551301 - H 71 -7.8 -3.71687 | CTAAAAGAGTTTAAA CATTAGAGTT ATT ATCTCTAATG CGTCACTTCCAGGTG ychE 1551629 - 1552276 + | conserved hypothetical protein; putative inner membrane protein TERM 2135 1552310 - 1552293 - f 78 -8.4 -4.05788 | opp_overlap 1552293, overlap 1552278 TCCTTTCAAATGAAA CGGAGC TGTCAT GCTCCG TTTACTTCGTCATTA TERM 2136 1552293 - 1552310 + F 76 -8.4 -3.98113 | opp_overlap 1552278 1552293 TCCTTTCAAATGAAA CGGAGC TGTCAT GCTCCG TTTACTTCGTCATTA TERM 2137 1552836 - 1552814 - f 74 -7.8 -4.08557 | GTCGCGAAAGAATAA TGTGTCTC GACAGGG GAGACACA GTACGAATCGACATA TERM 2138 1554224 - 1554210 - g 71 -2.8 -4.84359 | opp_overlap 1554210 CGATCTGCATAAAAA GCTG GCGATTG CAGC CTCTTCATTGTGGAA oppA 1553014 - 1554645 + | oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2139 1554648 - 1554688 + F 71 -4.1 -4.87786 | gap 2, opp_overlap 1554654, overlap 1554649 1554652 1554653 TGTGAAGCACTAATG GCA-ATA-CGTGGGGCAGG CGTGT CCTGCTCCACGGTGTCTGA TTTTTATCGCATTAC TERM 2140 1554652 - 1554683 + F 72 -9.5 -3.22077 | gap 1, opp_overlap 1554654, overlap 1554649 1554648 1554653 AAGCACTAATGGCAA TA-CGTGGGGCAGG CGTGT CCTGCTCCACGGTG TCTGATTTTTATCGC TERM 2141 1554653 - 1554681 + F 86 -12.4 -3.16187 | opp_overlap 1554654, overlap 1554652 1554649 1554648 AGCACTAATGGCAAT ACGTGGGGCAGG CGTGT CCTGCTCCACGG TGTCTGATTTTTATC TERM 2142 1554680 - 1554654 - f 87 -13.7 -3.10464 | opp_overlap 1554653 1554652 1554649 1554648 GCACTAATGGCAATA CGTGGGGCAGG CGTGT CCTGCTCCACG GTGTCTGATTTTTAT TERM 2143 1555140 - 1555158 + G 70 -4.4 -4.5442 | opp_overlap 1555140, overlap 1555125 1555142 TGGGGCTGGCAATGA CCGGGGTT GTT ATCCCCAG TTTTGTGGTTGCGCC TERM 2144 1555572 - 1555589 + G 74 -2.7 -4.93877 | overlap 1555579 TAAGCCTGACTATCC TGGTTGG TGCG TTAACCA TTTTGTTTAATGCCA oppB 1554731 - 1555651 + | oligopeptide transporter subunit ; membrane component of ABC superfamily TERM 2145 1555698 - 1555686 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1555666 - 1556574 + | oligopeptide transporter subunit ; membrane component of ABC superfamily oppD 1556586 - 1557599 + | oligopeptide transporter subunit ; ATP-binding component of ABC superfamily TERM 2146 1558452 - 1558434 - g 93 -8.8 -4.95547 | TGGAGAAGAATAAAA CCATCCAG TTA CTGGAAGG GGAATTACCGTCGCC oppF 1557596 - 1558600 + | oligopeptide transporter subunit ; ATP-binding component of ABC superfamily TERM 2147 1558629 - 1558610 - T 100 -13.6 -4.03586 | opp_overlap 1558610 CTTTAAACACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCCGAAA TERM 2148 1558610 - 1558629 + T 100 -13.6 -4.56597 | opp_overlap 1558610 CTTTAAACACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCCGAAA yciU 1558982 - 1558653 - | hypothetical protein cls 1560477 - 1559017 - | cardiolipin synthase 1 TERM 2149 1559058 - 1559046 - G 78 -9.1 -3.88577 | overlap 1559044 TGAAGAAGTAAAACA GTCGC TCG GCGAC ACGTTGCCATAATGG TERM 2150 1559681 - 1559658 - G 78 -8.8 -4.24413 | opp_overlap 1559657, overlap 1559655 1559659 CGCAGGAATAAATAA TCCCCATCGC GGTA GCGATGGGAC CTTCCATACGCGCCA TERM 2151 1559680 - 1559659 - G 81 -12.3 -3.13925 | opp_overlap 1559657, overlap 1559658 1559655 GCAGGAATAAATAAT CCCCATCGC GGTA GCGATGGGA CCTTCCATACGCGCC TERM 2152 1559944 - 1559921 - G 74 -3 -5.00616 | overlap 1559925 GGGCTGCGGAAAAAA GCCACACTCC CGGC GGAGTCGAGC ATCAATCGGCAGTGA ECUMN_1547 1560509 - 1560793 + | hypothetical protein TERM 2153 1560824 - 1560795 - gT 75 -8.7 -3.79071 | gap 1, opp_overlap 1560795 1560791 1560790 1560796 1560799, overlap 1560796 1560799 TCTACAATATCTAAA TGTACTGGGCACCA TTG CGGTGCCCAATA-A GTTTACTCTTCCGTC TERM 2154 1560824 - 1560796 - gT 72 -10.3 -2.86961 | opp_overlap 1560796 1560795 1560791 1560790 1560799, overlap 1560795 1560799 CTACAATATCTAAAT GTACTGGGCACCA TTG CGGTGCCCAATAA GTTTACTCTTCCGTC TERM 2155 1560821 - 1560799 - gT 79 -12 -2.67958 | opp_overlap 1560799 1560796 1560795 1560791 1560790, overlap 1560795 1560796 CAATATCTAAATGTA CTGGGCACCA TTG CGGTGCCCAA TAAGTTTACTCTTCC kch 1562101 - 1560848 - | voltage-gated potassium channel ECUMN_1548 1560739 - 1560906 + | hypothetical protein TERM 2156 1562385 - 1562355 - TR 77 -9.1 -3.74178 | opp_overlap 1562358, overlap 1562361 TAAGGAAAGGCCAAA CAAGAACACGGTT GCAAA AACCGTGCCCTTA AATATTGAATCTCTA TERM 2157 1562379 - 1562361 - TR 80 -8.9 -4.1023 | opp_overlap 1562358, overlap 1562355 AAGGCCAAACAAGAA CACGGTT GCAAA AACCGTG CCCTTAAATATTGAA yciI 1562698 - 1562402 - | putative enzyme TERM 2158 1563555 - 1563545 - g 81 -6.8 -4.62069 | GCGTGAGGTGAAAAA TGCG ATG CGCA GATGGCGTTATGAGC tonB 1562922 - 1563641 + | membrane spanning protein in TonB-ExbB-ExbD complex TERM 2159 1563678 - 1563649 - T 100 -13.7 -4.08144 | opp_overlap 1563650 1563656, overlap 1563650 1563656 TTCAGTAAGCATAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAT TATTACTCAACAGGT TERM 2160 1563650 - 1563677 + T 100 -17.2 -3.71848 | opp_overlap 1563649 1563650 1563656, overlap 1563656 TCAGTAAGCATAAAG TCAAAAGCCTCC GACC GGAGGCTTTTGA TTATTACTCAACAGG TERM 2161 1563677 - 1563650 - T 100 -17.2 -3.04404 | opp_overlap 1563650 1563656, overlap 1563649 1563656 TCAGTAAGCATAAAG TCAAAAGCCTCC GACC GGAGGCTTTTGA TTATTACTCAACAGG TERM 2162 1563671 - 1563656 - T 87 -10.4 -4.40173 | opp_overlap 1563656 1563650, overlap 1563650 1563649 AGCATAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGATTATTACTC TERM 2163 1563656 - 1563671 + T 89 -10.4 -4.5774 | opp_overlap 1563650 1563649 1563656, overlap 1563650 AGCATAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGATTATTACTC yciA 1564079 - 1563681 - | putative hydrolase TERM 2164 1564132 - 1564098 - R 88 -10.8 -4.22948 | overlap 1564104 AAAACCGACTTAAAA GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC TGAGGAGAACAGAGG yciB 1564723 - 1564184 - | putative intracellular septation protein involved in cell division TERM 2165 1564414 - 1564430 + g 72 -4.3 -4.7254 | overlap 1564415 GTTCTTTACCCAGCA TCCGCTG AAT TAGCGGC TTTTTCATCACCCAT yciC 1565496 - 1564753 - | conserved hypothetical protein; putative inner membrane protein TERM 2166 1565912 - 1565930 + G 82 -3 -5.28176 | overlap 1565914 CTCTGGCAGTGCCTA TGCGCATG AAG CAGGCGAA TTTTTTATGCGTGCA ompW 1565853 - 1566491 + | outer membrane protein W TERM 2167 1566527 - 1566505 - T 100 -14.2 -4.84017 | overlap 1566482 1566506 AATTCCGCACAAAAA CGACCCCGTA ATA TACGGGGTCA ATAAGGACATGGTAT TERM 2168 1566526 - 1566506 - T 100 -15.5 -3.49687 | overlap 1566482 1566505 ATTCCGCACAAAAAC GACCCCGTA ATA TACGGGGTC AATAAGGACATGGTA yciE 1567057 - 1566551 - | hypothetical protein TERM 2169 1566889 - 1566905 + g 71 -2.2 -5.00138 | GATCAAGAATAGTTT CCAGTT GAATA ATCTGG TTTTTGGTTTCACTA yciF 1567603 - 1567103 - | hypothetical protein TERM 2170 1567645 - 1567624 - R 87 -13.7 -2.94144 | opp_overlap 1567621, overlap 1567621 TCTCCAGTGAAATCA CTGCGAGCC ATAC GGCCCGCAG ATGCAATTATCTTTA yciG 1567868 - 1567689 - | hypothetical protein TERM 2171 1568242 - 1568220 - R 100 -11.2 -4.45261 | opp_overlap 1568237, overlap 1568221 TAAAGAAAGTTAAAA TGCCGCCAGC GGA ACTGGCGGCT GTGGGATTAACTGCG TERM 2172 1568241 - 1568221 - R 95 -14.7 -3.2553 | opp_overlap 1568237, overlap 1568220 AAAGAAAGTTAAAAT GCCGCCAGC GGA ACTGGCGGC TGTGGGATTAACTGC trpA 1569055 - 1568249 - | tryptophan synthase, alpha subunit trpB 1570248 - 1569055 - | tryptophan synthase, beta subunit TERM 2173 1569536 - 1569521 - G 70 -5.4 -4.36914 | opp_overlap 1569496 1569531, overlap 1569529 1569531 GTTTCGTTGATAAAA TCAGCA AACA TGCCGA TGGCATTTGAACCGC TERM 2174 1570119 - 1570137 + g 72 -5.2 -4.58395 | overlap 1570122 GCAGGTCGTTGAACT GGGCCTGA AAT TCAGGATC TTTTTGCGCGCTGAC trpC 1571618 - 1570260 - | fused indole-3-glycerolphosphate synthetase ; N-(5-phosphoribosyl)anthranilate isomerase TERM 2175 1570351 - 1570363 + g 86 -10.5 -3.89614 | opp_overlap 1570350 1570349 1570346 GAATTAAAATCAAGT CCGGC GCA GCCGG TTTGTGCCGCTTCCA trpD 1573217 - 1571622 - | fused glutamine amidotransferase (component II) of anthranilate synthase ; anthranilate phosphoribosyl transferase TERM 2176 1572291 - 1572241 - G 77 -11.9 -3.26933 | gap 1, opp_overlap 1572259 1572287, overlap 1572239 ATATCAAGATTAATA CCG-AACGCCGCCAGCAGATCCGA CGAG CCGGATTTACTGGAGACGCTACGG TTGCCGTGTTTCGCC trpE 1574779 - 1573217 - | component I of anthranilate synthase TERM 2177 1574110 - 1574095 - G 77 -10.4 -3.6502 | opp_overlap 1574102 TATGCGGCACGGAAA CCACCG GCAG CGGTGG CGCGGTTTCGGTCAG TERM 2178 1574827 - 1574809 - R 100 -8.8 -5.75342 | TTTGTTCAAAAAAAA GCCCGC TCATCAG GCGGGC TGGGTATCTGATTGC trpL 1574915 - 1574871 - | trp operon leader peptide yciV 1575053 - 1575934 + | hypothetical protein TERM 2179 1576085 - 1576074 - g 79 -3.6 -5.1167 | AATTGAAGATAAAAA CGCC ATGG AGCG TATTTGTCGAATTCG yciO 1575931 - 1576551 + | hypothetical protein TERM 2180 1576688 - 1576653 - g 72 -4.8 -4.62783 | gap 1, opp_overlap 1576653 1576656 1576656, overlap 1576655 1576656 GAGTTATCCGAAAAA CACGGAGATCCCTTTTT ATG AAGAAGGGATCTC-GCT CTTTGATGTTGAAGC TERM 2181 1576686 - 1576655 - g 78 -9.6 -3.92746 | gap 1, opp_overlap 1576653 1576656 1576656, overlap 1576653 1576656 GTTATCCGAAAAACA CGGAGATCCCTTTTT ATG AAGAAGGGATCTC-G CTCTTTGATGTTGAA TERM 2182 1576656 - 1576687 + G 82 -11.8 -3.55084 | gap 1, opp_overlap 1576655 1576653 1576656, overlap 1576656 1576653 TTATCCGAAAAACAC G-GAGATCCCTTTTT ATG AAGAAGGGATCTCGC TCTTTGATGTTGAAG TERM 2183 1576656 - 1576686 + G 73 -12 -2.72568 | opp_overlap 1576655 1576653 1576656, overlap 1576653 1576656 TTATCCGAAAAACAC GGAGATCCCTTTTT ATG AAGAAGGGATCTCG CTCTTTGATGTTGAA yciQ 1576579 - 1578474 + | conserved hypothetical protein; putative inner membrane protein TERM 2184 1578604 - 1578630 + F 76 -11 -3.01712 | opp_overlap 1578594 1578593 CAGACTTTACTATCA GTGAGTCAGA TGTAAGT TCTGACTCAC TGTTGCACAAAAGCA TERM 2185 1578992 - 1578976 - g 74 -7.9 -4.07885 | opp_overlap 1578978 GACCGTCTGCCAAAA CTGCGTG GCG CACGCTG GATTGCCGTAGGTCG rluB 1578685 - 1579560 + | 23S rRNA pseudouridylate synthase TERM 2186 1579569 - 1579589 + T 89 -8.3 -4.62872 | opp_overlap 1579566 1579569 CGGTTAATCAAAGTA TGCCGGA CGTCATA TCCGGCA TTTTTACAGATTAGT btuR 1580190 - 1579600 - | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase yciK 1580945 - 1580187 - | putative oxoacyl-(acyl carrier protein) reductase TERM 2187 1581285 - 1581273 - g 82 -9.1 -4.2528 | GCTCAACGTAATAAA CGCCA GCG TGGCG AGTTACGGGTCAACA sohB 1581165 - 1582214 + | putative inner membrane peptidase TERM 2188 1582242 - 1582223 - T 93 -10.7 -4.46775 | opp_overlap 1582223 GATGTAAAAGACAAA CGCGAGG GTAAGA CCTCGCG TTTTGCTTTAATCAA TERM 2189 1582223 - 1582242 + T 93 -10.7 -4.58773 | opp_overlap 1582223 GATGTAAAAGACAAA CGCGAGG GTAAGA CCTCGCG TTTTGCTTTAATCAA yciN 1582501 - 1582250 - | hypothetical protein ECUMN_1572 1582546 - 1582758 + | hypothetical protein TERM 2190 1583029 - 1583018 - g 70 -4.4 -4.58395 | CTCAGCTGCCAAAAA GAGT GCCG ACTC TACCTCCACCAAGAC TERM 2191 1583685 - 1583670 - g 74 -6 -4.56775 | AGTCTGCTGGAAAAA GCGCGC TACA GCGTGC TGGAACGTGAAGACA TERM 2192 1583802 - 1583791 - g 90 -4.4 -5.40072 | TTGGCGTGAAAAAAA CCAT GATG ATGG CGCAGCGTTTGTATG topA 1582881 - 1585478 + | DNA topoisomerase I, omega subunit TERM 2193 1585502 - 1585534 + F 80 -10.8 -3.29121 | gap 1, opp_overlap 1585510, overlap 1585510 TCTGTCAGGTTTTTA TAAACAAAGGGTCGC GAAA GCGGCCCTTT-TTTA TTGCATATTATTTTT TERM 2194 1585510 - 1585527 + F 100 -10.5 -5.49234 | opp_overlap 1585510, overlap 1585502 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT TERM 2195 1585527 - 1585510 - f 87 -8.3 -4.55295 | opp_overlap 1585510 1585502 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT cysB 1585688 - 1586662 + | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding TERM 2196 1586669 - 1586718 + F 73 -4.5 -4.85618 | gap 2, overlap 1586673 1586676 GAAAAATAATTTCTT GCG-TTAT-TTCCGGCACCTTTT ATGTAG AGAAGGTGCCGGAATATATTCTC TTTTGTTGCTTATTT TERM 2197 1586673 - 1586713 + F 100 -12.9 -4.09554 | gap 1, overlap 1586669 1586676 AATAATTTCTTGCGT TAT-TTCCGGCACCTTTT ATGTAG AGAAGGTGCCGGAATATA TTCTCTTTTGTTGCT TERM 2198 1586676 - 1586709 + F 100 -16.2 -3.35613 | overlap 1586673 1586669 AATTTCTTGCGTTAT TTCCGGCACCTTTT ATGTAG AGAAGGTGCCGGAA TATATTCTCTTTTGT ECUMN_1575 1586957 - 1587121 + | hypothetical protein ECUMN_1576 1587103 - 1587291 + | hypothetical protein TERM 2199 1587508 - 1587523 + G 100 -11.8 -4.64464 | CTCACTGATCCCTGA CCCCGC TGCG GCGGGG TTTTCATTTGCTTTG ECUMN_1577 1587428 - 1587610 + | hypothetical protein TERM 2200 1588028 - 1588067 + G 75 -7.3 -4.32034 | gap 2, overlap 1588027 TTAACCCGCTCTCAC CGGTCGACCTGGTCATTGA CCAC TCGGTGACC-G-TCGATCG TTTTGGTGATGATGA TERM 2201 1589958 - 1589948 - g 72 -8.2 -3.82433 | opp_overlap 1589947, overlap 1589938 ATAAGCAGGAGCAAA CGCC GCT GGCG GTGATTGCCGGGAAA acnA 1587664 - 1590339 + | aconitate hydratase 1 TERM 2202 1590346 - 1590380 + T 77 -11.6 -2.52896 | opp_overlap 1590343 TTGAAGTAACGAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TGAATTACACAATGC TERM 2203 1590399 - 1590425 + T 77 -6.6 -4.44974 | opp_overlap 1590400, overlap 1590400 1590424 ATTACACAATGCAAG AGGGTTATTTGT TCA GCAAATGACCCA TTTTCTCGGCTTTGG TERM 2204 1590400 - 1590424 + T 74 -10.1 -3.26262 | opp_overlap 1590400, overlap 1590399 TTACACAATGCAAGA GGGTTATTTGT TCA GCAAATGACCC ATTTTCTCGGCTTTG ribA 1590993 - 1590403 - | GTP cyclohydrolase II pgpB 1591163 - 1591927 + | phosphatidylglycerophosphatase B yciS 1592076 - 1592384 + | conserved hypothetical protein; putative inner membrane protein TERM 2205 1593198 - 1593184 - g 70 -7.1 -4.08945 | AGCAGTTGGGTAAAA CTGCC GAATG GGCAG AATTCCTGCAGCGCG yciM 1592391 - 1593560 + | hypothetical protein pyrF 1593752 - 1594489 + | orotidine-5'-phosphate decarboxylase yciH 1594489 - 1594815 + | hypothetical protein TERM 2206 1594824 - 1594843 + T 100 -13.6 -3.71687 | opp_overlap 1594824, overlap 1594817 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC TERM 2207 1594843 - 1594824 - T 100 -13.6 -5.0916 | opp_overlap 1594817 1594824 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC osmB 1595159 - 1594941 - | lipoprotein deoT 1596177 - 1595428 - | DNA-binding transcriptional repressor, DeoR family TERM 2208 1595850 - 1595884 + g 81 -12.8 -3.22491 | overlap 1595872 TGATCGTGACATTTT TCTTCTGCTCGCCCAG AGT CCGGGCGAGCAGGGCA TTGCTGCTGCCATTT ECUMN_1588 1596482 - 1596267 - | hypothetical protein gmr 1598572 - 1596587 - | modulator of Rnase II stability TERM 2209 1598796 - 1598772 - R 87 -10 -4.42062 | overlap 1598773 GAGCGGGGAAATAAA TGGCCCATTC ATGAG GAATGGGCCG TGAAAGGAGATTACG TERM 2210 1598795 - 1598773 - R 93 -13.5 -3.24755 | overlap 1598772 AGCGGGGAAATAAAT GGCCCATTC ATGAG GAATGGGCC GTGAAAGGAGATTAC rnb 1600741 - 1598807 - | ribonuclease II TERM 2211 1600447 - 1600460 + g 72 -4.5 -4.62336 | opp_overlap 1600447 GATGATCAGGAACGA TGGCC AGAC GGTCA TTTTTGCCCTGAACT yciW 1601936 - 1600809 - | putative amidase or amidotransferase TERM 2212 1602041 - 1602061 + r 93 -15.4 -3.01712 | opp_overlap 1602041 GTATAACAGAGATAA CGGGCGGC AGGAC GCCGCCCG TCTTGACCAACAGAA TERM 2213 1602061 - 1602041 - R 100 -16.1 -3.71149 | opp_overlap 1602041 GTATAACAGAGATAA CGGGCGGCA GGA CGCCGCCCG TCTTGACCAACAGAA fabI 1602868 - 1602080 - | enoyl-[acyl-carrier-protein] reductase, NADH-dependent ECUMN_1593 1603205 - 1603038 - | hypothetical protein ycjD 1603617 - 1603252 - | hypothetical protein TERM 2214 1603613 - 1603659 + g 100 -19.8 -2.62184 | GATTTTATTTTATCC ATCACCTCATTCTGACAAGA TTTAATC TCTTGTCAGAATGAGGTGAA TAATCTGGAAGGAGG sapF 1604491 - 1603685 - | antimicrobial peptide transporter subunit ; ATP-binding component of ABC superfamily transporter TERM 2215 1604434 - 1604451 + g 77 -6.9 -4.45664 | opp_overlap 1604430 1604429 1604433 1604434 GACGACGAAACCAAC CGGTCCG GTAG CGGAACG TTTTACTTAAATTAC sapD 1605485 - 1604493 - | antimicrobial peptide transporter subunit; ATP-binding component of ABC superfamily transporter sapC 1606375 - 1605485 - | antimicrobial peptide transporter subunit ; permease component of ABC superfamily transporter TERM 2216 1606313 - 1606346 + g 91 -10.9 -4.26188 | gap 1, opp_overlap 1606312 GTCACTATAAAATTT GCGCCAGGC-GGTACG CAG CGTGCCCGGCGGGCGC TTTTCGCTGTATACG sapB 1607327 - 1606362 - | antimicrobial peptide transporter subunit ; permease component of ABC superfamily transporter sapA 1608967 - 1607324 - | antimicrobial peptide transporter subunit; periplasmic-binding component of ABC superfamily transporter TERM 2217 1608875 - 1608864 - G 81 -7.2 -4.68545 | overlap 1608857 ACGCAATAGACAAAA CCGC TGTC GCGG ATATCAGCATGCGGG ECUMN_1600 1609210 - 1609010 - | hypothetical protein; putative exported protein ymjA 1609525 - 1609280 - | hypothetical protein TERM 2218 1609602 - 1609658 + r 74 -9.7 -3.29324 | opp_overlap 1609609 1609640 TCATACATCTTTTTA TAGTT-AATGGCGCGGTGCATTACCCT CAGGC AGGATAATGCGCCGCG-CATCCGACTA TTACGTTTCGCTCAC TERM 2219 1609650 - 1609609 - R 89 -14.6 -3.12351 | gap 1, opp_overlap 1609602, overlap 1609640 TCTTTTTATAGTTAA TGGCGCGGTGCATTACCCT CAGGC AGGATAATGCGCCGCG-CA TCCGACTATTACGTT puuP 1611044 - 1609659 - | putrescine importer TERM 2220 1609845 - 1609864 + g 71 -2.9 -4.81082 | gap 1, opp_overlap 1609845 1609846, overlap 1609845 1609846 CGGCATCAGCAAATA G-TGGAAG TGATC CTTCCAGC TTTTATTCATTCCTT TERM 2221 1611166 - 1611183 + r 71 -7.7 -3.78953 | gap 1, overlap 1611168 GGCGCATACGCAGCC TCCCTCGC CAT GCG-GGGA TTTAATCATCGGCAT TERM 2222 1611344 - 1611333 - R 70 -7.2 -4.0031 | opp_overlap 1611333 AGGCCGATGAAACAA CCCC GCAA GGGG TATTACGCGTTTTTC puuA 1612765 - 1611347 - | gamma-Glu-putrescine synthase TERM 2223 1611973 - 1611983 + g 70 -5.4 -4.4009 | CCATAAAAGTGGCGT GCAT CTT ATGC TTTTCTGCCATCAGA puuD 1612977 - 1613741 + | gamma-Glu-GABA hydrolase puuR 1613768 - 1614325 + | DNA-binding transcriptional repressor TERM 2224 1614410 - 1614396 - f 87 -8.5 -4.55295 | GTCGCCAGAAATAAA CGGGC ATACG GCCCG GGGATCTCTGCGCCC TERM 2225 1615346 - 1615330 - g 77 -5.8 -4.59773 | gap 1, opp_overlap 1615341 CCGGATTTGCAAAAA GCGG-CG AGCG CGACCGC TGCGGGCATTTTCTA puuC 1614475 - 1615962 + | gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent TERM 2226 1616425 - 1616414 - g 70 -5.8 -4.1822 | overlap 1616416 CGCTACGGCAATAAA CAGC TGGA GCTG CTGGACGCCAACGCT TERM 2227 1617167 - 1617189 + G 70 -11.2 -2.72511 | overlap 1617166 CATTACCCGTTCCCC GGCGGGCGCA CGC TGCGCGTGCC ATTTACCGCGATGGG puuB 1615964 - 1617244 + | gamma-Glu-putrescine oxidase, FAD/NAD(P)-binding TERM 2228 1618094 - 1618084 - g 70 -6.8 -4.12188 | opp_overlap 1618093, overlap 1618072 1618085 TGACGATGGCGAAAA GCCT CGC AGGC GGCATGCCGCTTTCG TERM 2229 1618139 - 1618157 + G 75 -11.6 -3.11687 | CGCGAATATTATGGA CGCGCCCG CGC CGGGCGGG TTGGGTGGTACTTAC TERM 2230 1618325 - 1618300 - g 78 -7.5 -4.44046 | gap 1 TTGATGCCAAAGAAA GCGTTCCGGCCA TCG CGGC-GGTACGC GGTCTGGGGTCTATG puuE 1617282 - 1618547 + | GABA aminotransferase, PLP-dependent pspF 1619644 - 1618667 - | DNA-binding transcriptional activator TERM 2231 1618766 - 1618780 + g 93 -8.6 -4.77438 | opp_overlap 1618765 1618768, overlap 1618754 CCCTTGTTGCAAACT GAGTTG CAG CAACTC TTTTTCCTGCTGCAT TERM 2232 1620394 - 1620384 - g 82 -3.2 -5.27335 | opp_overlap 1620387 TTCGGTAAACAAAAA TCGC TGG ACGA TCAGTTTGCCGAACT pspA 1619811 - 1620479 + | regulatory protein for phage-shock-protein operon pspB 1620533 - 1620757 + | DNA-binding transcriptional regulator of psp operon pspC 1620757 - 1621116 + | DNA-binding transcriptional activator pspD 1621125 - 1621346 + | peripheral inner membrane phage-shock protein pspE 1621421 - 1621735 + | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 2233 1621748 - 1621772 + F 72 -8.6 -3.57418 | overlap 1621751 TAACAAATTACTCAT TGAGCGGTGT AAACA ACGCCGCTTA TTCATTTGATAAATC TERM 2234 1621751 - 1621769 + F 72 -8.1 -3.91541 | overlap 1621748 CAAATTACTCATTGA GCGGTGT AAACA ACGCCGC TTATTCATTTGATAA ycjX 1621854 - 1623251 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain ycjF 1623248 - 1624309 + | conserved hypothetical protein; putative inner membrane protein tyrR 1624457 - 1625998 + | DNA-binding transcriptional dual regulator, tyrosine-binding TERM 2235 1626047 - 1625993 - T 75 -8.9 -3.63862 | gap 2, opp_overlap 1625995 1626001 1626006, overlap 1625999 1626008 CAGAAGAAGAACGAA GAGTAAGCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATT-A-ACTTATGC TTTCAGTACAGCCAG TERM 2236 1625995 - 1626047 + T 89 -12.1 -3.64703 | opp_overlap 1625993 1625999 1626008, overlap 1626001 1626006 GAAGAAGAACGAAGA GTAAGCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTTATGC TTTCAGTACAGCCAG TERM 2237 1626043 - 1625999 - T 100 -13.7 -3.4382 | opp_overlap 1625995 1626001 1626006, overlap 1625993 1626008 AAGAACGAAGAGTAA GCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTT ATGCTTTCAGTACAG TERM 2238 1626001 - 1626041 + T 100 -18.5 -3.61609 | opp_overlap 1625999 1625993 1626008, overlap 1625995 1626006 GAACGAAGAGTAAGC GCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAC TTATGCTTTCAGTAC TERM 2239 1626006 - 1626036 + T 100 -21.4 -3.27601 | opp_overlap 1625999 1625993 1626008, overlap 1626001 1625995 AAGAGTAAGCGCGAA TATGCCTGATGGTG CAA CACCATCAGGCATA TTAACTTATGCTTTC TERM 2240 1626034 - 1626008 - T 100 -19.6 -3.06737 | opp_overlap 1626006 1626001 1625995, overlap 1625999 1625993 GAGTAAGCGCGAATA TGCCTGATGGTG CAA CACCATCAGGCA TATTAACTTATGCTT tpx 1626548 - 1626042 - | lipid hydroperoxide peroxidase ycjG 1626667 - 1627632 + | L-Ala-D/L-Glu epimerase mpaA 1628395 - 1627607 - | murein peptide amidase A TERM 2241 1628316 - 1628301 - G 73 -11.8 -2.71712 | overlap 1628300 GTTCCGGGCGGAAAT GCGCCG CGTT CGGCGC GTGGGCGGGTTACGG TERM 2242 1628386 - 1628399 + g 75 -5.3 -4.63932 | TTGTGCAAATTTTGC GGATT ATCA AATCC TTTTCTTCAACGCTA TERM 2243 1628606 - 1628582 - R 100 -13.7 -4.22591 | AATAAGTTTAATAAA TCGTACTGCAC ATA GTACAGTACGA AGGTAGCTATATAAT ymjC 1629264 - 1628626 - | putative NAD(P) binding enzyme ycjY 1630267 - 1629335 - | putative hydrolase ycjZ 1630393 - 1631292 + | putative nucleic acid-binding regulator TERM 2244 1631868 - 1631854 - g 70 -7.1 -4.11884 | AATCAGAACGAGAAA GGGGA GATTG TCCCC GGCGTTGCGACTCAG TERM 2245 1632634 - 1632624 - g 70 -6.8 -4.09685 | opp_overlap 1632623 1632624 GGGGACGGGCGAAAA GCCA GCG TGGC ATTTTACACCAGATG mppA 1631629 - 1633242 + | murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2246 1633254 - 1633281 + T 74 -10.6 -2.74525 | overlap 1633251 TTGATGTGATGGGAA TTGGCGTTACCC TTGT GGATAACGCCAG TGATGTCTGATTTAG ynaI 1634324 - 1633293 - | conserved hypothetical protein; putative inner membrane protein TERM 2247 1633421 - 1633400 - G 70 -5.1 -4.43877 | overlap 1633396 TAATCTTCAAATAAA CGTCTTGCT GTGC AGCAAGCCA TTCAGCCCATACCGT ynaJ 1634568 - 1634825 + | conserved hypothetical protein; putative inner membrane protein TERM 2248 1634855 - 1634834 - T 100 -10.1 -5.30155 | opp_overlap 1634836, overlap 1634836 GCAGTAAGTAAAAAA TAGGCCCGA TAAC TCGGGCCTT GTCAGTTATTGAAGA TERM 2249 1634853 - 1634836 - T 100 -12.7 -4.27681 | opp_overlap 1634836, overlap 1634834 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA TERM 2250 1634836 - 1634853 + T 93 -12.7 -3.47751 | opp_overlap 1634836 1634834 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA uspE 1635825 - 1634875 - | stress-induced protein TERM 2251 1635955 - 1635907 - R 83 -12 -3.23638 | TGAAACAGTGATGAA CCTTCTGCCAGATCAATAAATC AGAAA AATTTAATGATATGACAGAAGG ATAGTGAGTTATGCG fnr 1636729 - 1635977 - | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth TERM 2252 1636876 - 1636859 - R 78 -8.5 -4.14739 | opp_overlap 1636856 1636859 1636869 CTATCTATTTGAAAA CCCTTAA GTTG TTAAGGG TAACTTTACATAAAA ogt 1637439 - 1636924 - | O-6-alkylguanine-DNA:cysteine-protein methyltransferase abgT 1638976 - 1637450 - | para-aminobenzoyl-glutamate transporter ECUMN_1632 1639100 - 1638906 - | hypothetical protein TERM 2253 1639023 - 1639037 + gr 70 -4.2 -4.59773 | opp_overlap 1639023 1639024, overlap 1639024 TGTTGTTATTTTAAA GGTGAC GGT GTCACG TTTTTCGGGATAGGG abgB 1640458 - 1639013 - | putative peptidase, aminobenzoyl-glutamate utilization protein abgA 1641768 - 1640458 - | putative peptidase, para-aminobenzoyl-glutamate utilization protein TERM 2254 1640499 - 1640487 - G 70 -10.5 -2.76404 | opp_overlap 1640482 1640488, overlap 1640483 1640484 TCCAGGGAAAATTGA GCGCG GTG CGCGC CAGCGTTTCGACGGC TERM 2255 1641143 - 1641098 - G 81 -8.3 -4.36914 | gap 1, overlap 1641102 GTGGTTGCCATAAAA TTATCACTGCCGCACACCACGG TGC CCGCAG-GTACGCCAGTGCCAA TGTGCACGGCAGTAA TERM 2256 1641139 - 1641102 - G 72 -11.3 -2.50077 | gap 1, overlap 1641098 TTGCCATAAAATTAT CACTGCCGCACACCACGG TGC CCGCAG-GTACGCCAGTG CCAATGTGCACGGCA TERM 2257 1642079 - 1642096 + G 77 -3.4 -5.03715 | CAGGAGCTGGAAGAA GGGTTG GCGGCA CAACTC TTTTTTCGCCGTAGT abgR 1641944 - 1642852 + | DNA-binding transcriptional regulator TERM 2258 1642896 - 1642868 - f 100 -12.5 -5.63504 | AACTGCATAAAAAAA TAGAGTCTGTCGA CAT CCGCCAGACTCTA CAGTACACACAGCAG ydaL 1643182 - 1643745 + | hypothetical protein ydaM 1644998 - 1643766 - | putative diguanylate cyclase, GG[D/E]EF domain signalling protein TERM 2259 1644230 - 1644269 + g 75 -4.3 -4.75372 | gap 3 GTAATCCGGTCATCG CGTCATGGTGG-GCAGCATG TTC CA-GCTGCTCCTCCA-GCCG TTTTTGCTCAGTAAT TERM 2260 1644629 - 1644600 - G 82 -2.9 -5.28176 | gap 1, opp_overlap 1644600, overlap 1644601 1644602 GTTAGTCAGAAAAAA GCGCGCATAAAAAC CTT GTTTTT-TGCGCTG ATAATTTGCCGAGCG ydaN 1645253 - 1646236 + | putative divalent cation transporter TERM 2261 1646289 - 1646272 - f 70 -2.7 -4.96848 | gap 1 GTCTGTATACAAAAA CGCCGCAA AGT TTG-AGCG AAGTCAATAAACTCT TERM 2262 1646426 - 1646445 + F 100 -10 -6.13 | ATTGATTCGTACGAC GCCGACTT TGAT GAGTCGGC TTTTTTTTTGCCTGT ECUMN_1639 1646512 - 1646685 + | hypothetical protein TERM 2263 1646752 - 1646779 + G 81 -10 -3.92542 | gap 1 ATGTTTTGCCTCCCG CCCAACTCA-CGA ACC TTGATGAGTTGGG TTATTTAACCATGAC TERM 2264 1647830 - 1647804 - g 77 -6.6 -4.52857 | opp_overlap 1647805 1647809, overlap 1647805 ATGTTGCAGATAAAA CTTAACTGGCAA ACG CCGCCAGTTAAT AGTTCCATTGTGCCG TERM 2265 1647829 - 1647805 - g 72 -10.1 -3.31232 | opp_overlap 1647805 1647809, overlap 1647804 TGTTGCAGATAAAAC TTAACTGGCAA ACG CCGCCAGTTAA TAGTTCCATTGTGCC dbpA 1646715 - 1648088 + | ATP-dependent RNA helicase, specific for 23S rRNA ydaO 1649152 - 1648217 - | putative C32 tRNA thiolase TERM 2266 1648897 - 1648909 + g 84 -10.5 -3.71672 | CGGGCAGAACGTGTT CCGGG AAG CCCGG TTGCTTTTGATCGAG TERM 2267 1649082 - 1649092 + g 74 -2.4 -5.0809 | GCTTCGCCCACGTTA CGAC GCA GACG TTTTTGTAATTTGTT TERM 2268 1649320 - 1649301 - R 100 -10.7 -4.95957 | opp_overlap 1649300 1649301 GAAATGAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA TERM 2269 1649301 - 1649320 + r 74 -10.7 -2.55351 | opp_overlap 1649301, overlap 1649300 GAAATGAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA uspF 1649762 - 1649328 - | stress-induced protein, ATP-binding protein TERM 2270 1649894 - 1649876 - R 93 -10.2 -5.03945 | GAATAAGCAGAAAAA GCCCGCCA TAA CAGCGGGC AGGAGGATTTAGAAC ompN 1651036 - 1649903 - | outer membrane pore protein N, non-specific TERM 2271 1651342 - 1651361 + r 100 -9.2 -5.81032 | opp_overlap 1651342 CAAATAATGAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTAGAATTG TERM 2272 1651361 - 1651342 - R 87 -11.4 -3.66438 | opp_overlap 1651342 CAAATAATGAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTAGAATTG ydbK 1654922 - 1651398 - | putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein TERM 2273 1653242 - 1653229 - G 77 -3.1 -5.1615 | overlap 1653230 GTAAGATGGAAAAAA GCCAT CTGC ATGAC GGTATTAATACGGGC TERM 2274 1653272 - 1653291 + g 70 -10 -3.16564 | gap 1, opp_overlap 1653270 CCGCCAGACCACATT CGCGGGCGA TTT TCGCC-GCG TTAATCACATAGAAG TERM 2275 1653926 - 1653938 + g 70 -6.9 -4.13903 | GATAGAGCGGTTCTG CCTGG GCA CCGGG TTCTTTGGTTCTGTC TERM 2276 1655115 - 1655100 - H 80 -4.6 -5.27769 | opp_overlap 1655105 ATAAAAAAGTAAAAA TGCGGG GCAA CGCGCA GGACAGCTCTCGACG ydbJ 1655196 - 1655462 + | hypothetical protein hslJ 1655881 - 1655459 - | heat-inducible protein TERM 2277 1655984 - 1655962 - R 100 -14.9 -3.66018 | GGATTATCTGAATAA GCTCCCCTG GAATG CAGGGGAGC GGCAAGATTAAACCA ldhA 1656981 - 1655992 - | fermentative D-lactate dehydrogenase, NAD-dependent TERM 2278 1656759 - 1656784 + g 84 -7.5 -4.66953 | opp_overlap 1656749, overlap 1656757 TAAAACCGGCACAGC GCAGGGCGATA TATT TAACGCCGTGC TTTTTCAGCTCTTCC TERM 2279 1658188 - 1658163 - g 89 -13.3 -3.39862 | ATTAAGCATGGATAA CAGCCAGCTGC CTTT GCAGCTGACCG GTGAAGCGAAACAGG TERM 2280 1659522 - 1659507 - g 74 -10.4 -3.51934 | overlap 1659505 GCGGCTGGATAAAGA CACCGC AGAT GCGGTG GTGAAAGACAATATG ydbH 1657189 - 1659828 + | hypothetical protein ynbE 1659825 - 1660010 + | putative lipoprotein ydbL 1660018 - 1660341 + | hypothetical protein TERM 2281 1661541 - 1661527 - g 78 -7.8 -4.33274 | TCTATATCACCAAAA CCGTCG GCG CAACGG TGGATGACCCCGCGA TERM 2282 1662008 - 1661964 - g 70 -10.1 -3.26932 | gap 1 AGAATCAGAATGGAA GGCGGGATCAATGTCA-GCG GTGGCG CGCATGGCATTGATGCCACC GGTGATAATAACGAA TERM 2283 1663017 - 1662998 - g 77 -8.6 -4.06419 | opp_overlap 1663000 TTTGGGTACAAACAA CACCATCA ATCT CGATGGTG GTATCAATATCTCTG TERM 2284 1663218 - 1663230 + G 100 -6.3 -5.47821 | CAGAGTTCAGTGAGA GATAG TGA CTATC TTTTTTTCGATGCAT TERM 2285 1666101 - 1666090 - g 79 -3.6 -5.10033 | overlap 1666057 GCAACACAAACAAAA CGGC TGAT ACCG ACGTGAAGCAGCAGT ydbA 1660767 - 1666586 + | putative autotransported outer membrane protein involved in cell adhesion TERM 2286 1666609 - 1666632 + F 95 -8.2 -5.4505 | gap 1, opp_overlap 1666609 CATGTGATACACAAA CCGCAATGCTG ATA CAG-GTTGCGG TTTTTTATTGCCGGA ydbC 1666794 - 1667654 + | putative aldo/keto reductase, NAD(P)-binding TERM 2287 1667659 - 1667694 + F 83 -6.3 -5.15634 | opp_overlap 1667659 1667661 1667663 1667668, overlap 1667663 1667668 CGCGAGAATAACGAA TATACAAAAGGGAAA GATGCA TTTCCCTTTTGTTTC TTTTTTAATGGCATG TERM 2288 1667692 - 1667661 - f 71 -8.9 -3.36276 | opp_overlap 1667659 1667663 1667668, overlap 1667659 1667663 1667668 CGAGAATAACGAATA TACAAAAGGGAAA GATGCA TTTCCCTTTTGTT TCTTTTTTAATGGCA TERM 2289 1667690 - 1667663 - f 81 -11.5 -3.23854 | opp_overlap 1667659 1667663 1667668, overlap 1667661 1667659 1667668 AGAATAACGAATATA CAAAAGGGAAA GATGCA TTTCCCTTTTG TTTCTTTTTTAATGG TERM 2290 1667663 - 1667690 + F 100 -11.5 -5.0917 | opp_overlap 1667663 1667661 1667659 1667668, overlap 1667659 1667668 AGAATAACGAATATA CAAAAGGGAAA GATGCA TTTCCCTTTTG TTTCTTTTTTAATGG TERM 2291 1667685 - 1667668 - f 74 -5.6 -4.70453 | opp_overlap 1667663 1667659 1667668, overlap 1667663 1667661 1667659 AACGAATATACAAAA GGGAAA GATGCA TTTCCC TTTTGTTTCTTTTTT TERM 2292 1667668 - 1667685 + F 87 -5.6 -5.3472 | opp_overlap 1667668 1667663 1667661 1667659, overlap 1667663 1667659 AACGAATATACAAAA GGGAAA GATGCA TTTCCC TTTTGTTTCTTTTTT TERM 2293 1668291 - 1668275 - g 81 -5.9 -4.87665 | TGCGAGTGACAAAAA TGACACT GAA AATGTCA AAAAAGCGCTGATGA TERM 2294 1669326 - 1669316 - g 72 -5.4 -4.58283 | TAATCTGGCGAAAAA TCAG TAT CTGA GTACGGCGATGAAAC ydbD 1667718 - 1670024 + | hypothetical protein TERM 2295 1670366 - 1670376 + G 71 -2.4 -4.89852 | CATGTTTCTGCTATT GCCC ATC GTGC TTTTTGTCCGTATGG ynbA 1670193 - 1670798 + | conserved hypothetical protein; putative inner membrane protein TERM 2296 1671649 - 1671661 + G 100 -3.3 -6.17669 | TGACTCATTAATTTT CACCG CTC CGGTA TTTTTTTATTTTATT ynbB 1670798 - 1671694 + | putative membrane associated CTP-phosphosubstrate transferase ynbC 1671710 - 1673467 + | putative hydrolase ynbD 1673481 - 1674773 + | putative membrane associated phosphatase azoR 1675432 - 1674827 - | NADH-azoreductase, FMN-dependent TERM 2297 1675628 - 1675602 - H 74 -3.1 -5.10933 | gap 1, overlap 1675609 TCATTTAAAAGAAAA TTAATCAGGCAG CCTA CTGCCC-ACTAA CGTTATGACAGAACA TERM 2298 1677570 - 1677584 + G 70 -7 -4.06179 | ACAAGAATATACCGG CGCACG TAA CGCGCG TTTCTCCATTTTCCC hrpA 1675690 - 1679535 + | ATP-dependent helicase ECUMN_1661 1680431 - 1679937 - | hypothetical protein TERM 2299 1680344 - 1680332 - G 71 -3.4 -4.87803 | TATCCTCAAATAAAA GAAG GTTAT CTTC AGTTTCCGGAGCGGT TERM 2300 1680718 - 1680708 - H 74 -6.8 -4.32436 | ACAGTATGACTAAAA CCAG TGT CTGG TTCGCGATGGCGCGA ydcF 1680821 - 1681621 + | hypothetical protein TERM 2301 1681661 - 1681625 - f 85 -8 -4.62069 | overlap 1681626 TCGTTACGTTAAAAA TTGCCCGTTTGTGAAC CACTT GTTTGCAAACGGGCAT GACTCCTGACGTTTA TERM 2302 1681660 - 1681626 - f 83 -11.5 -3.3692 | overlap 1681625 CGTTACGTTAAAAAT TGCCCGTTTGTGAAC CACTT GTTTGCAAACGGGCA TGACTCCTGACGTTT aldA 1681818 - 1683257 + | aldehyde dehydrogenase A, NAD-linked TERM 2303 1683292 - 1683267 - T 80 -10.4 -3.71527 | opp_overlap 1683269, overlap 1683269 TCGTAATGAGTGAAA GAGGCGGAGG TTTTTT CCTCCGCCTG TGTGCGTCAGAGTTT TERM 2304 1683290 - 1683269 - T 100 -13 -3.43853 | opp_overlap 1683269, overlap 1683267 GTAATGAGTGAAAGA GGCGGAGG TTTTTT CCTCCGCC TGTGTGCGTCAGAGT TERM 2305 1683269 - 1683290 + T 86 -13 -2.91383 | opp_overlap 1683269 1683267 GTAATGAGTGAAAGA GGCGGAGG TTTTTT CCTCCGCC TGTGTGCGTCAGAGT gapC 1684300 - 1683299 - | glyceraldehyde-3-phosphate dehydrogenase C TERM 2306 1683591 - 1683571 - G 70 -9.7 -3.19509 | opp_overlap 1683571, overlap 1683569 1683567 1683565 1683588 TTCCAAGAATAGACA CCAGTTCAG TCA CCGAACCGG TTTTCACGGGTACGC cybB 1684489 - 1685019 + | cytochrome b561 TERM 2307 1685069 - 1685037 - f 77 -4.9 -4.92385 | overlap 1685051 1685055 GATATTTAAAGAAAA CGCCTGTACTA AAACCGACCCG TGGTACAGGCG AAGAATACGGGTCTA ydcA 1685264 - 1685437 + | hypothetical protein mokB 1685716 - 1685549 - | regulatory peptide TERM 2308 1685718 - 1685757 + H 75 -9.2 -3.6217 | overlap 1685716 1685722 ATTGCTTGGTTCATT CGTTGGCCTCGGTTGATA GAAA TATCGGTCGGGGCCTTCG TCTTTCTGATTCCCG TERM 2309 1685722 - 1685753 + H 85 -11.6 -3.52009 | overlap 1685718 1685716 CTTGGTTCATTCGTT GGCCTCGGTTGATA GAAA TATCGGTCGGGGCC TTCGTCTTTCTGATT TERM 2310 1686786 - 1686766 - g 81 -4.7 -5.10497 | AACGGATTGAAAAAA TCGCCAG TGGTGAT CTGACGA TGAATGATGAACCGG TERM 2311 1686995 - 1686966 - g 86 -10.8 -3.97307 | gap 1, overlap 1686967 CGCACTGAAGAACAA GC-GGCGGCAATT GAACA AACTGCCGCCAGC ATGGAGCAACTCACT TERM 2312 1686993 - 1686967 - g 71 -10.9 -2.97902 | overlap 1686966 GCACTGAAGAACAAG CGGCGGCAATT GAACA AACTGCCGCCA GCATGGAGCAACTCA trg 1686048 - 1687688 + | methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor TERM 2313 1687718 - 1687703 - T 71 -9 -3.36983 | opp_overlap 1687699 1687698 AAAATGTTCAAGGAA GGGATC GACA GATCCC TTCACCTTTCAGAAC ydcI 1688650 - 1687727 - | putative DNA-binding transcriptional regulator TERM 2314 1689225 - 1689242 + G 80 -5.5 -4.93547 | ATGATGCTTCTCTGG CGCGTAA TCCC TTCCGCG TTTTTACTTCATTAC ydcJ 1688867 - 1690210 + | hypothetical protein TERM 2315 1690616 - 1690634 + GT 70 -10.2 -2.54896 | opp_overlap 1690616 1690613, overlap 1690616 ACTTAGCGCAAACAG CGTGGCGT GGT GCGCCGCG TCCGTTACCTGACAC ECUMN_1673 1692214 - 1692011 - | hypothetical protein mdoD 1690465 - 1692090 + | glucan biosynthesis protein, periplasmic TERM 2316 1692103 - 1692126 + gF 90 -14.6 -2.90075 | TAATCGTTTTTTCTT CGGCACCTTC TTCG GGAGGTGCCG TCTGGTTAAACACGA TERM 2317 1692435 - 1692423 - g 74 -7.7 -4.13282 | ATGAGATGCTCAAAA TCCTG CAG CAGGA GAGCGTCAAAGAGGT ydcH 1692230 - 1692454 + | hypothetical protein TERM 2318 1692465 - 1692481 + F 100 -10.8 -5.02074 | TGTAAACTTTCCTAA GCCGCC AGCCA GGCGGC TTTTTTAACAACTGC TERM 2319 1692926 - 1692962 + G 85 -8.7 -4.5442 | opp_overlap 1692916 1692930 1692938, overlap 1692927 1692930 TCAAATGTCGGGTGG ACAATGCGCAAAGCAAC CAG GTCGCTTTGCGTAATGG TTTTATCCTTGAAGG TERM 2320 1692927 - 1692961 + G 83 -12.2 -3.3217 | opp_overlap 1692916 1692930 1692938, overlap 1692926 1692930 CAAATGTCGGGTGGA CAATGCGCAAAGCAAC CAG GTCGCTTTGCGTAATG GTTTTATCCTTGAAG TERM 2321 1692930 - 1692958 + G 76 -12.5 -2.52606 | opp_overlap 1692930 1692938, overlap 1692927 1692926 ATGTCGGGTGGACAA TGCGCAAAGCAAC CAG GTCGCTTTGCGTA ATGGTTTTATCCTTG TERM 2322 1692958 - 1692930 - g 83 -12.5 -3.28791 | opp_overlap 1692930 1692927 1692926, overlap 1692938 ATGTCGGGTGGACAA TGCGCAAAGCAAC CAG GTCGCTTTGCGTA ATGGTTTTATCCTTG rimL 1692517 - 1693056 + | ribosomal-protein-L7/L12-serine acetyltransferase ydcK 1694028 - 1693048 - | putative enzyme TERM 2323 1693479 - 1693467 - G 77 -3.3 -5.0925 | opp_overlap 1693467 TGGCAAAATCAAAAA CTTCG GCG CGATG TTCAATAAAAGCATA TERM 2324 1694634 - 1694652 + G 72 -5.3 -4.56597 | gap 1, overlap 1694631 TGGTGCATTGGGCTA CACC-GAC GCCG GTCTGGTG TTTTTAGGCGCAGGC tehA 1694152 - 1695144 + | potassium-tellurite ethidium and proflavin transporter TERM 2325 1695680 - 1695651 - g 73 -9.2 -3.58428 | GTGAAATACAATGAA GACGTCGGCGAG CTGCAC CGCACCGACGCC AACGGTAATCGTATT tehB 1695141 - 1695734 + | putative AdoMet-dependent methyltransferase TERM 2326 1696117 - 1696133 + G 79 -3.7 -5.03145 | TCTAAAATCACCCAG CCAGA TAAATAT TCTGG TTTTTTAAACAATTA TERM 2327 1696178 - 1696189 + G 70 -5.8 -4.28774 | opp_overlap 1696178 AAACAACCTCAGCAA CAGG TAAA CCTG TTTTACGTTGGGTAG ydcL 1696036 - 1696704 + | putative lipoprotein TERM 2328 1696713 - 1696732 + TF 100 -13.6 -5.21236 | AAAGTAATTCCAGCT GCGCCATC GTAA GATGGCGC TTTTTATTATCGGTT ydcO 1698034 - 1696739 - | putative benzoate transporter TERM 2329 1697039 - 1697026 - Gf 100 -3.8 -5.68438 | opp_overlap 1697032, overlap 1697027 CGAGCAAATAAAAAA TGCC TGCAAC GGCA GCTGCCAGCCAACGT TERM 2330 1697636 - 1697626 - Gf 79 -2.4 -5.18726 | TGGTGACAATAAAAA CGCC GAT GGCT TCGTTAAGTGTTAAT ydcN 1698003 - 1698539 + | putative DNA-binding transcriptional regulator TERM 2331 1698568 - 1698588 + FH 78 -6.1 -4.63527 | overlap 1698570 TTCGCAACGTCGCGC TTGTGGCTA AAA TAGCCGCCA TTTTTCAGCTACTGG ydcP 1698612 - 1700573 + | putative peptidase yncJ 1700895 - 1700665 - | hypothetical protein TERM 2332 1701067 - 1701084 + H 77 -7.1 -4.30177 | opp_overlap 1701066 AAATTACACACATAG GTAAACA CTAA TGTTTAC TTTGTTGATATACTC yncN 1701117 - 1701293 + | hypothetical protein ydcQ 1701318 - 1701755 + | putative DNA-binding transcriptional regulator TERM 2333 1702064 - 1702051 - g 74 -2.3 -5.12068 | CACAGGCAATAAAAA TGCCG AAAG CGCCA GTCATTCCAGTCACA TERM 2334 1702731 - 1702743 + G 78 -7.7 -4.31688 | opp_overlap 1702723 1702722, overlap 1702722 GCGAAAGCGTGGGAT CACCA CGA TGGTG TTTTGCATTGCTCTT ydcR 1701834 - 1703240 + | putative DNA-binding transcriptional regulator fused with a domain with PLP-binding motif TERM 2335 1704510 - 1704499 - g 72 -4.4 -4.63527 | opp_overlap 1704500 1704503 1704503, overlap 1704500 TTATTAGGCGAAAAA GGTT GTGA AACC AACGGTTTTAACTAT ydcS 1703485 - 1704630 + | putative spermidine/putrescine transporter subunit ; periplasmic-binding component of ABC superfamily transporter ydcT 1704648 - 1705661 + | putative spermidine/putrescine transporter subunit ; ATP-binding component of ABC superfamily tranporter TERM 2336 1705965 - 1705975 + G 70 -6.8 -4.14243 | overlap 1705939 1705960 GTCACTATCGCCAGC GCCA TTC TGGC TTTTCCAATGGCGTG ydcU 1705662 - 1706603 + | putative spermidine/putrescine transporter subunit ; permease of ABC superfamily transporter TERM 2337 1707004 - 1707017 + G 70 -3.8 -4.68994 | TTTTTCACCATCGTG GTCG GTCATG CGAC TTTTTGCGTAGTGGT ydcV 1706593 - 1707387 + | putative spermidine/putrescine transporter subunit; permease component of ABC superfamily TERM 2338 1708045 - 1708025 - g 72 -6.7 -4.2349 | TTGGCAGAGGCAAAA CGGTGGGCG ATC CGCTGACCG GACATCCCAAAGTAC ydcW 1707409 - 1708833 + | medium chain aldehyde dehydrogenase TERM 2339 1708840 - 1708871 + F 70 -5.8 -4.32482 | opp_overlap 1708841, overlap 1708841 1708843 AAACATTAAGTTAAA TGTTAGTGGCTGTT ATAG GGCGGCCACTATCG TTTTAGGTTCTGAGT ECUMN_1693 1709056 - 1709865 + | putative acetyltransferase ydcX 1710482 - 1710730 + | conserved hypothetical protein; putative inner membrane protein ydcY 1710816 - 1711049 + | hypothetical protein TERM 2340 1711083 - 1711056 - T 80 -8.4 -4.25283 | gap 1, overlap 1711059 ATCCTCTGATTAAAA TGAGCGTCTGGCC ACC AGCCAGGCGC-CA ACCACAAGTAAAATT TERM 2341 1711081 - 1711059 - T 81 -11.2 -3.13504 | overlap 1711056 CTCTGATTAAAATGA GCGTCTGGCC ACC AGCCAGGCGC CAACCACAAGTAAAA ydcZ 1711499 - 1711050 - | conserved hypothetical protein; putative inner membrane protein yncA 1712014 - 1711496 - | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 2342 1712226 - 1712210 - g 74 -2.2 -5.06816 | ATGGGGCAACAAAAA CAGCGT AATCG ACGTTG GGTTCTGGCCTCGCG yncB 1712195 - 1713232 + | putative conserved oxidoreductase, Zn-dependent and NAD(P)-binding TERM 2343 1713258 - 1713241 - f 71 -10.5 -2.82279 | overlap 1713236 1713238 TGATTAAAGATACGA CGGCGGC GTAA GCCGCCA TAAAAATCCAGGCAA TERM 2344 1713843 - 1713853 + G 70 -6.8 -4.02022 | opp_overlap 1713829 TGCGAACAGGCTATT TCGC TTA GCGA TTTATCATCGTTCAA yncC 1713430 - 1714095 + | putative DNA-binding transcriptional regulator TERM 2345 1714121 - 1714102 - T 91 -11.4 -4.06903 | AATCGTTAAAGTAAA TGCCCGGC AAAT ACCGGGCA TCAAGGTAATTACTC yncD 1716233 - 1714131 - | putative iron outer membrane receptor TERM 2346 1715562 - 1715577 + g 76 -4 -4.96848 | AATGCGTACGCCCAG TTTGGC ATTG GCTAAA TTTTTCTGTGCGCCA yncE 1716475 - 1717536 + | hypothetical protein TERM 2347 1717618 - 1717640 + T 100 -14.9 -4.19953 | opp_overlap 1717611 GTCAGTAATTTGAAT TTGCCCGGC ACGTA GCCGGGCAA TTTTGCAATTAACTC ansP 1719148 - 1717649 - | L-asparagine transporter TERM 2348 1717979 - 1717967 - G 70 -6.9 -4.00782 | opp_overlap 1717966 GCACACGATGATAAA CGCCC ATG AGGCG ATGATTCCCAGCGAC TERM 2349 1718280 - 1718270 - G 74 -3.2 -4.9792 | CAGTTTAGAGAAAAA CGTC ACG AACG GACTTTGCCCCGCCT yncG 1719415 - 1720032 + | putative enzyme with similarity with GST ECUMN_1704 1720572 - 1720856 + | conserved hypothetical protein, PAAR motifs TERM 2350 1721276 - 1721255 - gf 81 -10.9 -3.52652 | gap 1, opp_overlap 1721255 1721254 1721252 GTTACTGAACGAGAA CGGCGT-CAC GGA GTGGACGCCG CTGTTTTATGAGGAC TERM 2351 1721255 - 1721276 + GF 75 -10.9 -2.8733 | gap 1, opp_overlap 1721255, overlap 1721254 1721252 GTTACTGAACGAGAA CGGCGT-CAC GGA GTGGACGCCG CTGTTTTATGAGGAC ECUMN_1705 1720875 - 1723280 + | conserved hypothetical protein, putative VgrG/E protein associated with Rhs elements TERM 2352 1723725 - 1723713 - gf 100 -3.3 -5.79526 | opp_overlap 1723722 AGATGGCAAAAAAAA TCCAG TAA CGGGA AAGGATTCTCATGTT ECUMN_1706 1723234 - 1724061 + | putative zinc-dependent metallopeptidase TERM 2353 1724118 - 1724107 - g 100 -3 -5.97575 | AAGCTATAAAAAAAA TCAT AATA ATGA CAATCGTAAATATTA ECUMN_1707 1724085 - 1724744 + | conserved hypothetical protein; putative exported protein ECUMN_1708 1724725 - 1724907 + | hypothetical protein TERM 2354 1725176 - 1725160 - f 73 -3 -5.09426 | gap 1, overlap 1725162 TTTAACCGCAAAAAA GT-TCGC CACA GCGATAC GAAATCACTGGCACG ECUMN_1710 1725524 - 1726084 + | hypothetical protein ECUMN_1711 1726444 - 1727079 + | hypothetical protein ECUMN_1712 1727232 - 1727405 + | hypothetical protein yddH 1728041 - 1727472 - | hypothetical protein TERM 2355 1728168 - 1728158 - H 71 -8.2 -3.80877 | opp_overlap 1728157 CGATCGCACAAAATA GCCG GTG CGGC GTCTATTCCAGGTTA nhoA 1728216 - 1729061 + | N-hydroxyarylamine O-acetyltransferase TERM 2356 1729631 - 1729621 - g 82 -2.4 -5.40072 | overlap 1729622 TCTCCTGGAAAAAAA GCGC CAG GAGC TGGAGAAAAAACGAA ECUMN_1715 1729133 - 1729663 + | transposase ORF A, IS1397 TERM 2357 1729944 - 1729932 - g 73 -9.1 -3.6761 | overlap 1729930 GCGCCTGAAGAAATA CCGGT CTT ACCGG GGAAATATGGGACTC TERM 2358 1730486 - 1730431 - g 82 -3.2 -5.22104 | gap 1, opp_overlap 1730432, overlap 1730432 1730433 1730435 CAAAAAAGAATAAAA CTCAGTCTTGGGGGACTCAGCCCGGTA GAA TACCGGACTGAGTATCAAAAAGCCG-G TTAACTGAAACTGTC ECUMN_1716 1729768 - 1730490 + | transposase ORF B, IS3 family, IS150 group yddE 1731472 - 1730579 - | hypothetical protein narV 1732231 - 1731551 - | nitrate reductase 2 (NRZ), gamma subunit narW 1732923 - 1732228 - | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) narY 1734467 - 1732923 - | nitrate reductase 2 (NRZ), beta subunit TERM 2359 1734370 - 1734384 + g 75 -5.6 -4.59773 | TACTCCATGCCTTCG CGTCCG GTC CAGACG TTTTTACAGGTCACC narZ 1738204 - 1734464 - | nitrate reductase 2 (NRZ), alpha subunit TERM 2360 1735806 - 1735793 - G 72 -6.7 -4.25056 | TAGGGGATGAATAAA CGGAT GCAT ATCCG AGGTGTTCATATCGT TERM 2361 1736981 - 1737007 + g 75 -4.5 -4.82901 | gap 1 GGTTTCCGTACCGGC GGC-AATGGATT CAAG ATTCCATTTGCC TTTTTCTCCCCAGCG TERM 2362 1737287 - 1737307 + g 77 -9.7 -3.64703 | opp_overlap 1737265, overlap 1737290 GCCCATTGCCATCGC CAGGGCGCT ATC AGTGCCTTG TTTCGGTGCCAGCCA TERM 2363 1737290 - 1737304 + g 72 -7.8 -3.96216 | overlap 1737287 CATTGCCATCGCCAG GGCGCT ATC AGTGCC TTGTTTCGGTGCCAG TERM 2364 1737918 - 1737937 + g 74 -10.6 -3.27298 | opp_overlap 1737912 CAGGAGTAACTTGCG CCACGCGG GCAG CCGCGAGG TTCATGATTGGGCAG narU 1739687 - 1738299 - | nitrate/nitrite transporter TERM 2365 1738457 - 1738443 - G 71 -2.7 -4.8622 | CTGCGGAATGAAAAA GCCGC CCACT GCGCC AATGGCTGAGATAAA TERM 2366 1738480 - 1738502 + g 88 -12.6 -3.60412 | opp_overlap 1738473 GAGATAAAGCCCAGA GCCGCCGCCG TTT CGGTGACGGC TTCTCTCTGAGCTTG TERM 2367 1738679 - 1738657 - G 72 -8.5 -3.79021 | gap 1 TAAAATGCGATGAAA TTACCGGAGC CTGT GC-CCGGTAA GGTAAGGAACAGCAG TERM 2368 1738735 - 1738718 - G 71 -2.7 -4.86033 | AAATCGCCATAAAAA TGAAGTT GATC AACGTCA CCCGCACGCCGCCGA TERM 2369 1739155 - 1739129 - G 71 -3.1 -4.84761 | gap 2, overlap 1739133 ATACGGGTATAAAAA TGAC-CAGC-GGT GCA ACCAGCTGCATCA CACTTACACCTAAGT ECUMN_1723 1741294 - 1739999 - | hypothetical protein TERM 2370 1740366 - 1740380 + g 71 -2.2 -4.91573 | opp_overlap 1740367, overlap 1740367 TTCTTCCCAGAAACA TTTAAA AAA TTTAAG TTTTTGCTCTGTTTT TERM 2371 1741281 - 1741310 + g 82 -11.7 -3.49186 | overlap 1741279 1741278 TAGTAATACTTTCTT TTCTGATTTATCA CCCT TGATAAATCAGGA TGTGTTTTATAACTC ECUMN_1724 1742582 - 1741317 - | hypothetical protein TERM 2372 1741597 - 1741613 + g 75 -5.1 -4.6468 | opp_overlap 1741595 1741597 GATCTATAACGAATA GACATTG AGT CATTGTC TTTTATATGATTTCC TERM 2373 1742732 - 1742713 - R 100 -10.7 -5.00138 | CACTTAAATCAAAAA CCAGCCC AGAGAA GGGCTGG TCAGGAGAGGATGTT ECUMN_1725 1743846 - 1742746 - | Outer membrane porin protein ompD precursor TERM 2374 1744099 - 1744077 - R 72 -9.8 -3.1706 | opp_overlap 1744077 1744074 1744078 AATTTATCTGATTAA CTGCCGGGCC GTA GACCCGACAA TTATTTTAGCCACGA yddG 1744929 - 1744105 - | metabolite and drug efflux pump TERM 2375 1745992 - 1745964 - g 90 -7.6 -4.75174 | gap 1 GATGGAAGCGAAAAA CAACAACGATGCA ACCT TG-ATCGTTGTCG ATCCCCGTTTTACGC TERM 2376 1746233 - 1746208 - g 70 -3.9 -4.60487 | overlap 1746177 1746209 1746210 TATGACGCTGAAAAA CGCCAGTACGA TAAA TCGTCCTGGAA CTATCAGTTCGATGA fdnG 1745218 - 1748265 + | formate dehydrogenase-N, alpha subunit, nitrate-inducible TERM 2377 1749064 - 1749052 - g 71 -9.1 -3.5394 | opp_overlap 1749051 1749054 AAAGGCGCGCTGAAA CCGCT GGC AGCGG CTGGCTTTATTGCCA fdnH 1748278 - 1749162 + | formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible fdnI 1749155 - 1749808 + | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible TERM 2378 1749828 - 1749859 + T 74 -10.3 -3.21395 | overlap 1749834 TTTTGAACTTTAAGC TGAAAATGGCGCT GTAAAA GGCGTCATTTTCA TATTGTAGACAACGT TERM 2379 1750011 - 1750030 + T 100 -8.6 -5.8187 | opp_overlap 1750011 GTCATCAGTTCTAAA TGGCGCTT TATA AAGTGCCA TTTTTTTATTGCGTA ECUMN_1732 1750598 - 1750320 - | conserved hypothetical protein, putative plasmid maintenance system killer protein adhP 1751794 - 1750784 - | alcohol dehydrogenase, 1-propanol preferring TERM 2380 1751922 - 1751897 - R 74 -11.1 -2.83071 | opp_overlap 1751906, overlap 1751896 AAGGGAGAGGGAAAT TGCCCGGTAGC CTTC ACTACCGGGCG CAGGCTTAGATGGAG sfcA 1753625 - 1751928 - | malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) TERM 2381 1752842 - 1752870 + g 100 -6.8 -5.60993 | gap 1, overlap 1752864 AAGAACAAATTTCAT TGCGATAGCGGTT AAGT AACGGC-ATCGCA TTTTTTTGTGCGAAG TERM 2382 1753261 - 1753251 - G 72 -6.8 -4.2074 | overlap 1753253 CTGGTAAGAGATAAA CACG CCG CGTG AACGGCGGTAGATCT TERM 2383 1753728 - 1753749 + r 100 -13.1 -3.82031 | opp_overlap 1753728 AGATAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA TERM 2384 1753749 - 1753728 - R 100 -13.1 -5.71295 | opp_overlap 1753728 AGATAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA bdm 1754236 - 1754021 - | biofilm-dependent modulation protein osmC 1754581 - 1755012 + | osmotically inducible, stress-inducible membrane protein TERM 2385 1755028 - 1755055 + T 87 -11.3 -3.67558 | overlap 1755025 AGCGTTGCCGGATGA CGCGTCAGGCG CGTGAT TGCCTGATGCG TTGTTAGCGTCTCTA ddpF 1755994 - 1755068 - | D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily ddpD 1756973 - 1755987 - | D-ala-D-ala transporter subunit ; ATP-binding component of ABC superfamily ddpC 1757866 - 1756970 - | D-ala-D-ala transporter subunit ; membrane component of ABC superfamily TERM 2386 1757413 - 1757403 - G 75 -6.8 -4.41616 | ATGGCGTTAAACAAA CTCG GCC CGAG AGCGGCTGCCAGTGC ddpB 1758885 - 1757863 - | D-ala-D-ala transporter subunit ; membrane component of ABC superfamily TERM 2387 1758181 - 1758138 - G 71 -3 -4.73682 | gap 1, overlap 1758141 1758143 GCGCATAACATAAAA CGAT-ATACCAGCCGGGCAAG CCG CTGGCCCGGGCGGTACGAATG TAATCTTCACTCAAT TERM 2388 1758175 - 1758143 - G 89 -14.1 -3.18381 | overlap 1758141 1758138 TAACATAAAACGATA TACCAGCCGGGCAAG CCG CTGGCCCGGGCGGTA CGAATGTAATCTTCA ddpA 1760437 - 1758887 - | D-ala-D-a la transporter subunit ; periplasmic-binding component of ABC superfamily ddpX 1761032 - 1760451 - | D-ala-D-ala dipeptidase, Zn-dependent TERM 2389 1761276 - 1761263 - R 89 -9.5 -4.55798 | CACGTTAAATGAAAA CCCGC GAGT GCGGG CGGGAGAAAATTGTC dos 1763689 - 1761290 - | cAMP phosphodiesterase, heme-regulated TERM 2390 1761516 - 1761534 + g 70 -4.6 -4.5852 | opp_overlap 1761516, overlap 1761518 TCGGTCAGACAACGA TCGACAAA GCT TTTGTCAA TTTTGATTTCCGTTA TERM 2391 1762004 - 1762015 + g 74 -5.8 -4.52101 | TGCGAAGATTTGCGG CTGG TAAA CCAG TTTTAGTTGGTTATT TERM 2392 1763666 - 1763653 - G 90 -4.5 -5.40072 | opp_overlap 1763653 GGGCGGGGAAAAAAA TGCCA TCGG CGGCA TTATCCGCATCGGTT yddV 1764757 - 1763714 - | putative diguanylate cyclase TERM 2393 1765030 - 1765067 + r 72 -8.5 -3.68647 | gap 1, opp_overlap 1765030, overlap 1765028 CGGCTTTAGCACGAA TGAGCGGATC-TGCTTGT TCG ACAAGCCCGGTCCACTCA TCTTTCATTCTTTTA TERM 2394 1765155 - 1765145 - R 72 -6.8 -4.27062 | GGAATCAAAACGAAA CGCA ACG TGCG AGGTCGACTAACTGC yddW 1766791 - 1765472 - | putative lipoprotein TERM 2395 1766896 - 1766874 - R 100 -13.5 -4.81685 | opp_overlap 1766874 AGCAAGCACGAAAAA GGGAGCGAT GAATT ATCGCTCCC TTATCTTATAACCAT TERM 2396 1766874 - 1766896 + r 100 -14.2 -3.75378 | opp_overlap 1766874 AGCAAGCACGAAAAA GGGAGCGATG AAT TATCGCTCCC TTATCTTATAACCAT gadC 1768457 - 1766922 - | glutamate:gamma-aminobutyric acid antiporter TERM 2397 1767476 - 1767489 + g 71 -3.1 -4.8667 | gap 1, opp_overlap 1767474, overlap 1767474 1767476 TCATTTTAGCGAATG CC-GCT GGC AGCAGG TTTTTCTGCGCTGTG TERM 2398 1768324 - 1768307 - G 75 -5.5 -4.67256 | GAATAAACCATAAAA TCCCGCC TAAT AGCAGGA AGAAGACTAATGAAA TERM 2399 1768499 - 1768527 + r 77 -7.6 -4.30416 | overlap 1768501 TCGGAACCGCACCTG TTTTGTTCTGAA GCGTA TTCAGAACAATA TTTTCCGTTGCTAAT TERM 2400 1768501 - 1768525 + r 80 -10.2 -3.75051 | overlap 1768499 GGAACCGCACCTGTT TTGTTCTGAA GCGTA TTCAGAACAA TATTTTCCGTTGCTA TERM 2401 1768594 - 1768565 - R 100 -15.1 -3.57387 | opp_overlap 1768569 1768571, overlap 1768566 AACAGACTTTGGAAA TTGTCCCGAAACG GGTT CGTTTCGGGACAC CGTTACCGTTAAACG TERM 2402 1768593 - 1768566 - R 100 -18.6 -2.7395 | opp_overlap 1768569 1768571, overlap 1768565 ACAGACTTTGGAAAT TGTCCCGAAACG GGTT CGTTTCGGGACA CCGTTACCGTTAAAC gadB 1770013 - 1768613 - | glutamate decarboxylase B, PLP-dependent TERM 2403 1769401 - 1769411 + g 72 -6.8 -4.25283 | opp_overlap 1769392, overlap 1769392 CAAAAGTCGGCACCA CACC GAT GGTG TTTTCGTCGCAGGCT TERM 2404 1770339 - 1770325 - R 70 -2.8 -5.01497 | opp_overlap 1770338 ATTATTACATAAAAA TAGCGA ATA TTGCTA AAATCCCCCGCCAAC TERM 2405 1770371 - 1770343 - R 70 -6.6 -4.14472 | opp_overlap 1770338 1770344 1770344 1770345, overlap 1770344 CGAATATTGCTAAAA TCCCCCGCCAAC GAGGT GTTGACGGGGCT GTTATTATTTTGGCA TERM 2406 1770344 - 1770370 + r 72 -8.6 -3.69534 | opp_overlap 1770343 1770344, overlap 1770338 1770344 1770345 GAATATTGCTAAAAT CCCCCGCCAACG AGG TGTTGACGGGGC TGTTATTATTTTGGC TERM 2407 1770370 - 1770344 - R 73 -10.1 -3.08201 | opp_overlap 1770344 1770344 1770338 1770345, overlap 1770343 GAATATTGCTAAAAT CCCCCGCCAAC GAGGT GTTGACGGGGC TGTTATTATTTTGGC TERM 2408 1770345 - 1770369 + r 79 -12.1 -2.80636 | opp_overlap 1770344 1770343, overlap 1770344 1770344 1770338 AATATTGCTAAAATC CCCCGCCAACG AGG TGTTGACGGGG CTGTTATTATTTTGG pqqL 1773171 - 1770376 - | putative membrane-associated peptidase TERM 2409 1770886 - 1770907 + g 90 -6.7 -5.093 | gap 1, opp_overlap 1770891, overlap 1770891 ATAACGCTTCCACTG TGAAACCTGT GCC ACAGGT-TCA TTTTGTTCTTTTACA TERM 2410 1770891 - 1770903 + g 72 -7.7 -3.89307 | opp_overlap 1770891, overlap 1770886 GCTTCCACTGTGAAA CCTGT GCC ACAGG TTCATTTTGTTCTTT TERM 2411 1772624 - 1772646 + g 81 -11.2 -3.62572 | opp_overlap 1772622 1772621, overlap 1772625 GCCAGCAGGAAAGGG CGGCGCGCCT GAG AGGTGCGCCA TTTCGCATCCTGATG TERM 2412 1772625 - 1772645 + g 90 -14.7 -2.77222 | opp_overlap 1772622 1772621, overlap 1772624 CCAGCAGGAAAGGGC GGCGCGCCT GAG AGGTGCGCC ATTTCGCATCCTGAT TERM 2413 1773196 - 1773179 - R 80 -9.1 -4.13945 | opp_overlap 1773179 ATCTCCATGCGAAAA CCGGGCA AATT TACCCGG TTAAGTAAAATCCGA yddB 1775588 - 1773216 - | putative porin protein TERM 2414 1773837 - 1773853 + g 78 -7.9 -4.39989 | GGTGGTTTTAGTCGC GCTGTCG GTA CGACTGC TTTTACTGATTTGAT TERM 2415 1775360 - 1775376 + g 78 -7.9 -4.30719 | opp_overlap 1775363 TACTTTGCGTTGAAT CCATGCG CAC CGCAGGG TTTGTTCTCAGCAGA TERM 2416 1775504 - 1775517 + g 71 -2.4 -4.91109 | opp_overlap 1775504 TCATCTCTTCAAAAA CATG CATGTA CATG TTTTTGTCATCGACG yddA 1777311 - 1775626 - | putative multidrug transporter fused subunits of ABC superfamily transporter: permease component; ATP-binding component TERM 2417 1777082 - 1777060 - G 76 -7.6 -4.2586 | GGATATTAATACAAA GATCCCCAGC AGG GCAGGGAACC AAAGGACAAGCTGCC ydeM 1778759 - 1777602 - | hypothetical protein TERM 2418 1778799 - 1778778 - R 87 -11.5 -3.61715 | opp_overlap 1778772, overlap 1778779 TATCTCGCTCAATAA GGCGGCGGA AAAA TCCGCCGCA TGAAGGTTTAGTTAT TERM 2419 1778798 - 1778779 - R 89 -15 -2.76815 | opp_overlap 1778772, overlap 1778778 ATCTCGCTCAATAAG GCGGCGGA AAAA TCCGCCGC ATGAAGGTTTAGTTA ydeN 1780493 - 1778811 - | putative sulfatase TERM 2420 1780825 - 1780847 + r 80 -6.2 -4.78661 | opp_overlap 1780825 1780824, overlap 1780826 CGCCTAAAAACAACG CGGGGCAG GGAATGG CTGCCCCA TTTTAATTTTTACGT TERM 2421 1780826 - 1780846 + r 75 -9.7 -3.4557 | opp_overlap 1780825 1780824, overlap 1780825 GCCTAAAAACAACGC GGGGCAG GGAATGG CTGCCCC ATTTTAATTTTTACG ydeO 1781657 - 1780896 - | putative DNA-binding transcriptional activator, AraC-type ECUMN_1754 1781965 - 1781732 - | hypothetical protein TERM 2422 1782163 - 1782133 - R 86 -12.8 -3.27476 | opp_overlap 1782127 ATGGTCAATGAGGAA TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA ATGAGGAGGCGAATT ydeP 1784456 - 1782177 - | putative oxidoreductase; putative molybdoenzyme TERM 2423 1784548 - 1784567 + r 71 -5 -4.49352 | opp_overlap 1784550, overlap 1784550 TCAACATGGATATAT AAGAGTAG GGGA CTACTCTC TTTCTATTTTAATCT ydeQ 1785703 - 1784789 - | putative fimbrial-like exported adhesin protein TERM 2424 1784900 - 1784937 + g 71 -3.4 -4.74103 | gap 1 TACTTTGCTTTTATT TACTGTCCCCAGGGAGA CGTTT TCTCCC-GTAGCCAGTA TTTTTCCATTACGCA ydeR 1786265 - 1785762 - | putative fimbrial-like adhesin exported protein ydeS 1786808 - 1786278 - | putative fimbrial-like adhesin exported protein ECUMN_1759 1789473 - 1786822 - | putative fimbrial outer membrane usher protein TERM 2425 1789064 - 1789086 + g 78 -5.5 -4.83615 | TCCTGAAGTGGTGTG CATGCGCTG TTGTC CGGCACATG TTTTTCTGCCGAATG ECUMN_1760 1790234 - 1789515 - | Periplasmic chaperone precursor TERM 2426 1790517 - 1790548 + r 79 -9.4 -3.85165 | gap 1, overlap 1790518 CATTGGTGAATTGCT C-GGGTGTGCGTAGC CAT GCCACACACACCCTG TTTCAATTTCAGATG TERM 2427 1790518 - 1790546 + r 100 -13.1 -3.50832 | overlap 1790517 ATTGGTGAATTGCTC GGGTGTGCGTAGC CAT GCCACACACACCC TGTTTCAATTTCAGA ECUMN_1761 1791199 - 1790588 - | putative major fimbrial subunit FmlA TERM 2428 1791242 - 1791228 - R 77 -7.2 -4.37886 | TTATTGCTTATAAAA CAAGAA TCA TTCTTG ATGGGATATTGCCCT ECUMN_1762 1791839 - 1791585 - | Putative HTH-type transcriptional regulator yqhC (fragment) TERM 2429 1792155 - 1792119 - R 71 -10.4 -2.8154 | gap 1, opp_overlap 1792122 1792124, overlap 1792118 1792122 AATGACGATTCAAAC TCACAGTTATGAACTCA GTTT TG-GTTCATAACTGTGT TAAACGCTGTCCATA TERM 2430 1792152 - 1792122 - R 74 -10.7 -2.66748 | gap 1, opp_overlap 1792122 1792124, overlap 1792119 1792118 GACGATTCAAACTCA CAGTTATGAACTCA GTTT TG-GTTCATAACTG TGTTAAACGCTGTCC TERM 2431 1792122 - 1792152 + r 76 -10.7 -3.03771 | gap 1, opp_overlap 1792119 1792118 1792122, overlap 1792124 GACGATTCAAACTCA CAGTTATGAACTCA GTTT TG-GTTCATAACTG TGTTAAACGCTGTCC ECUMN_1763 1793057 - 1792254 - | putative carboxymuconolactone decarboxylase precursor TERM 2432 1793036 - 1793024 - G 72 -6.9 -4.18213 | overlap 1793021 1793032 AATCAGAAATAACAA GCGAC ATA GCCGC TGCTGCAAGTACGCT ECUMN_1764 1793798 - 1793073 - | putative lipoprotein TERM 2433 1793134 - 1793118 - G 70 -6.5 -4.24342 | opp_overlap 1793118 1793110, overlap 1793120 TTTGTTACGAAGAAA TACCGGT TTT ACCGGGA TTGCGTCCTTCCTGG TERM 2434 1793132 - 1793120 - G 76 -9.1 -3.72374 | opp_overlap 1793118 1793110, overlap 1793118 TGTTACGAAGAAATA CCGGT TTT ACCGG GATTGCGTCCTTCCT ECUMN_1766 1794933 - 1793914 - | putative Aryl-alcohol dehydrogenase (NADP(+)) TERM 2435 1794409 - 1794390 - G 77 -10 -3.64703 | overlap 1794394 1794395 GGCTCTGTACGGAAA CAAAGGGC GTCA GCCCTTCG CGTTCAGCAAGGGCG TERM 2436 1794405 - 1794394 - G 77 -7.2 -4.46112 | overlap 1794390 1794395 CTGTACGGAAACAAA GGGC GTCA GCCC TTCGCGTTCAGCAAG ECUMN_1767 1795508 - 1794936 - | putative NAD(P)H oxidoreductase ECUMN_1768 1795850 - 1795659 - | hypothetical protein ECUMN_1769 1796271 - 1795801 - | hypothetical protein ECUMN_1770 1796350 - 1796180 - | hypothetical protein ECUMN_1771 1797385 - 1796438 - | putative Tas protein ECUMN_1772 1798160 - 1797459 - | hypothetical protein TERM 2437 1798087 - 1798072 - G 86 -6.1 -5.14563 | TCGGCCAGGAAAAAA CCGGT TGGTAC ACCGG ATGCGCCTTTAATCG ECUMN_1773 1798468 - 1798157 - | hypothetical protein TERM 2438 1798322 - 1798312 - G 77 -3.2 -5.12068 | CACATTCAAGAAAAA TAGC GAC GCCA GGTCTGTCCTGACGG ECUMN_1774 1798605 - 1799504 + | putative LysR-family transcriptional regulator ECUMN_1775 1799891 - 1799748 - | hypothetical protein hipA 1801224 - 1799902 - | regulator with hipB hipB 1801490 - 1801224 - | DNA-binding transcriptional regulator TERM 2439 1801691 - 1801667 - R 71 -9.3 -3.36452 | opp_overlap 1801658 1801667 AGTCGGCAATATTAA GCCGCATGC ATCTTCG ACATGCGGC TTATACGGTTTACCA ECUMN_1778 1807121 - 1801701 - | conserved hypothetical protein; putative exported protein TERM 2440 1802764 - 1802778 + g 80 -5.7 -4.94902 | ACGCCGTCCCATTTA CTGGT CAGAT ACCAG TTTTTCTCGTCATTC TERM 2441 1806291 - 1806324 + g 77 -8.9 -4.10161 | gap 1, overlap 1806293 CTGCACATTCAGGGT TCCGAT-ACCGGTGGC ATT GCCACCGATAATCGTA TTTTCAGCCGTAATC TERM 2442 1806293 - 1806322 + g 85 -11.5 -3.64716 | gap 1, overlap 1806291 GCACATTCAGGGTTC CGAT-ACCGGTGGC ATT GCCACCGATAATCG TATTTTCAGCCGTAA TERM 2443 1807431 - 1807415 - R 83 -3.7 -5.43866 | overlap 1807396 1807418 TAATTGCTAAAAAAA GAAGTTT ATT AAACCCC TTTTTCATCCATTAA TERM 2444 1807428 - 1807418 - R 71 -4 -4.79949 | overlap 1807415 1807396 TTGCTAAAAAAAGAA GTTT ATT AAAC CCCTTTTTCATCCAT TERM 2445 1807633 - 1807608 - R 84 -6.9 -5.17054 | gap 1 AGAATACTCAAAAAA CAGCCACGGTCA TCA TGAT-GTGGCTG TCAATGAAACTATAA lsrK 1809235 - 1807643 - | autoinducer AI-2 kinase TERM 2446 1808551 - 1808565 + g 70 -5.6 -4.41348 | GTGAACTTACCACGC CCAGCA ATG TGCCGG TTTCTTTGACAGGAG lsrR 1810267 - 1809314 - | DNA-binding transcriptional regulator TERM 2447 1809575 - 1809603 + g 75 -11.7 -2.95139 | opp_overlap 1809572 1809573, overlap 1809572 1809569 ACCAATCATTAACTG TTCGCCCTGGCTG ATA TAGCCGGAGCGAA TGATTGTTGCGTCGT TERM 2448 1810888 - 1810908 + G 79 -10.4 -3.85092 | AAAATGAAGAACTTG CTGGCGGC GCTGG GCTGCCAG TTTGATCTGCATAGT TERM 2449 1811855 - 1811887 + G 85 -12 -3.58365 | opp_overlap 1811849 TCTACCAACTGTTGC GCAGCATCGCCGCA CAGAA TGTGGCTGTGCTGC TTATCTCCTCTGATC ego 1810516 - 1812051 + | fused AI2 transporter subunits of ABC superfamily: ATP-binding components TERM 2450 1812583 - 1812598 + G 75 -4.6 -4.82901 | opp_overlap 1812583, overlap 1812572 1812571 1812585 GGCTGCTGGCGAAGA CGGCGT TTGG ACGCAG TTTTTATGCCACGGG lsrC 1812045 - 1813073 + | AI2 transporter ; membrane component of ABC superfamily TERM 2451 1813070 - 1813059 - f 71 -2.2 -5.08824 | gap 1, opp_overlap 1813067, overlap 1813038 TCGTCAGGTAAAAAA CG-GG AGG CCGCG TAATGCGTATTCGCT TERM 2452 1813213 - 1813259 + G 83 -10.3 -4.14598 | gap 1, overlap 1813215 TATCTGCATTGGCAT TGTCG-CCCTACCGCTGACGAT GGTG ATTGTCAGTGGTGGGATCGATA TTTCGTTTGGTTCGA TERM 2453 1813215 - 1813257 + G 81 -10.7 -3.66148 | gap 1, overlap 1813213 TCTGCATTGGCATTG TCG-CCCTACCGCTGACGAT GGTG ATTGTCAGTGGTGGGATCGA TATTTCGTTTGGTTC TERM 2454 1813878 - 1813889 + G 81 -7.2 -4.71828 | GTTCCATTATCGGCA CCGC CATT GCGG TTTTATTAGTGGGAT lsrD 1813073 - 1814065 + | AI2 transporter ; membrane component of ABC superfamily lsrB 1814077 - 1815099 + | AI2 transporter ; periplasmic-binding component of ABC superfamily lsrF 1815126 - 1816001 + | putative aldolase lsrG 1816025 - 1816315 + | hypothetical protein tam 1816372 - 1817130 + | trans-aconitate methyltransferase yneE 1818048 - 1817134 - | conserved hypothetical protein; putative inner membrane protein TERM 2455 1817866 - 1817853 - G 79 -2.3 -5.28166 | GAAAACCAAGAAAAA TGGCG ATGG CGACA CCGAGAATGCTGAAC TERM 2456 1818235 - 1818220 - R 89 -10.4 -4.58585 | TAGTGAAATAAGAAA CCCGGT CGAA ACCGGG TTCAGAGTATTAGCA uxaB 1819696 - 1818245 - | altronate oxidoreductase, NAD-dependent yneF 1821341 - 1819923 - | putative membrane-associated diguanylate cyclase (GGDEF domain) TERM 2457 1820624 - 1820587 - G 89 -14.3 -3.14404 | ATATCAATCACCGAA TTTGCCACCAGTACGAT TTCC ACCGCACCGGTGACAAA GGTCAACAGACATGT TERM 2458 1821282 - 1821272 - G 75 -5.4 -4.62069 | opp_overlap 1821272 TGGTTAGCGCAAAAA TAGC GAT GCTA TTACGTAGCAGATGA yneG 1821839 - 1821480 - | hypothetical protein yneH 1822765 - 1821839 - | putative glutaminase TERM 2459 1822780 - 1822804 + r 75 -10.8 -2.87931 | gap 1 CTTTCTACTCCTGGA C-CGCAGGTCT GAAA AGACCTGCGAG TATATCAGAGCTGAA yneI 1824217 - 1822829 - | putative aldehyde dehydrogenase TERM 2460 1823229 - 1823241 + g 86 -9.1 -4.3898 | opp_overlap 1823224 1823223 AGTAACAAACGCGCA CCCTG CGC CAGGG TTTTCTCCACCTGAT TERM 2461 1824624 - 1824610 - g 82 -11.4 -3.53012 | overlap 1824613 TTGGTTCGCTGGAAA GCACCG CAG CGGTGC GCATTCCGGCCACGC TERM 2462 1824693 - 1824715 + G 85 -14.2 -2.78384 | TCACTTTCCACCGGC CCTTCCGGCA CTA TGCTGGAAGG TGTGCTGGAGGGAAA yneJ 1824318 - 1825193 + | putative DNA-binding transcriptional regulator yneK 1825277 - 1826392 + | hypothetical protein ydeA 1826542 - 1827732 + | wide-spectrum sugar (arabinose, isopropyl-beta-D-galactoside) exporter; MFS superfamily TERM 2463 1827752 - 1827739 - T 77 -9.5 -3.6707 | opp_overlap 1827739 ACGCAATAGTTGAAA GGCCC ATTC GGGCC TTTTTTAGTGGTACG TERM 2464 1827739 - 1827752 + T 100 -9.5 -5.1861 | opp_overlap 1827739 ACGCAATAGTTGAAA GGCCC ATTC GGGCC TTTTTTAGTGGTACG marC 1828422 - 1827757 - | putative wide-spectrum exporter marR 1828634 - 1829068 + | DNA-binding transcriptional repressor of multiple antibiotic resistance TERM 2465 1829426 - 1829438 + G 72 -4.7 -4.68424 | GATGACCAATATGCA GGGCG AAT CGCGC TTTTTACATCCATTA marA 1829088 - 1829471 + | DNA-binding transcriptional dual activator of multiple antibiotic resistance marB 1829503 - 1829721 + | conserved hypothetical protein associated with multiple antibiotic resistance operon TERM 2466 1829731 - 1829748 + T 100 -12.7 -3.73068 | ATGTAGTTTGTTCTG GCCCCGA CATA TCGGGGC TTATTAACTTCCCAC eamA 1830651 - 1829752 - | cysteine and O-acetyl-L-serine efflux system TERM 2467 1830293 - 1830282 - G 77 -5.8 -4.63527 | opp_overlap 1830288 CCAGTACGCCAAAAA TCGC TAAG GCGA TCCCCGCCAATTGTT TERM 2468 1830349 - 1830337 - G 70 -6.9 -4.08485 | CTCACCGAAAGTAAA CGCGC CAA GCACG ATAGTAAAAAACGCC ydeE 1830846 - 1832033 + | putative transporter TERM 2469 1832009 - 1832025 + T 70 -5.7 -4.40298 | overlap 1832008 AATTCGTGCAAGACC GTGGGGG CAG CCCGCGC TTTGTTGATTTAAGT TERM 2470 1832280 - 1832316 + T 91 -10.2 -4.82901 | gap 1, opp_overlap 1832281, overlap 1832281 1832283 ATAATCCCTCACCTA ACCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTGA TTTTTATGACGGCAA TERM 2471 1832281 - 1832315 + T 100 -13.7 -3.49419 | gap 1, opp_overlap 1832281, overlap 1832280 1832283 TAATCCCTCACCTAA CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG ATTTTTATGACGGCA TERM 2472 1832315 - 1832281 - T 87 -13.7 -3.06133 | gap 1, opp_overlap 1832281 1832280 1832283 TAATCCCTCACCTAA CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG ATTTTTATGACGGCA TERM 2473 1832283 - 1832313 + T 100 -14.9 -3.31915 | gap 1, opp_overlap 1832281, overlap 1832281 1832280 ATCCCTCACCTAACC GGCCCCTTGTTACA GTTG TGTA-CAAGGGGCC TGATTTTTATGACGG TERM 2474 1832356 - 1832339 - T 100 -10.5 -6.09133 | GACGGCAAAAAAAAA CCGCCAG TAAA CCGGCGG TGAATGCTTGCATGG ydeH 1833364 - 1832474 - | hypothetical protein ydeI 1834011 - 1833619 - | hypothetical protein TERM 2475 1833906 - 1833933 + g 74 -7.6 -4.07885 | overlap 1833909 AGCCATCTTCTATTG CATGAGGCGGCG GTGG CGCTGCATCCTG TTTTAAACCGCCCTG TERM 2476 1834326 - 1834374 + r 85 -10.2 -4.2074 | gap 1, opp_overlap 1834335, overlap 1834328 1834334 1834335 CTGCTGCAATTACTG CTCTAACCA-GGCTGGCCTGGCG ATAT CTCCAGGCCAGCCATTGGTGGTG TTTATATGTTCAAGC TERM 2477 1834328 - 1834372 + r 87 -11.4 -3.70043 | gap 1, opp_overlap 1834335, overlap 1834326 1834334 1834335 GCTGCAATTACTGCT CTAACCA-GGCTGGCCTGGCG ATAT CTCCAGGCCAGCCATTGGTGG TGTTTATATGTTCAA TERM 2478 1834334 - 1834365 + r 100 -15.8 -3.31691 | opp_overlap 1834335, overlap 1834328 1834326 1834335 ATTACTGCTCTAACC AGGCTGGCCTGGCG ATAT CTCCAGGCCAGCCA TTGGTGGTGTTTATA TERM 2479 1834335 - 1834364 + r 100 -19.3 -2.58292 | opp_overlap 1834335, overlap 1834334 1834328 1834326 TTACTGCTCTAACCA GGCTGGCCTGGCG ATAT CTCCAGGCCAGCC ATTGGTGGTGTTTAT TERM 2480 1834364 - 1834335 - R 100 -19.3 -2.71364 | opp_overlap 1834335 1834334 1834328 1834326 TTACTGCTCTAACCA GGCTGGCCTGGCG ATAT CTCCAGGCCAGCC ATTGGTGGTGTTTAT dcp 1836421 - 1834376 - | dipeptidyl carboxypeptidase II ydfG 1836558 - 1837304 + | L-allo-threonine dehydrogenase, NAD(P)-binding TERM 2481 1837313 - 1837330 + F 80 -10.5 -3.8591 | TCAGTAATTTTTATA CCCGGCG TAAC TGCCGGG TTATTGCTTGTCACA ydfH 1837393 - 1838079 + | putative DNA-binding transcriptional regulator TERM 2482 1838088 - 1838111 + F 86 -13.2 -2.87211 | overlap 1838099 1838100 AGAGTAATTCATTTC CTCTCATCCC ATTC GGGGTGAGAG TCTCTCCCCCCGCCT ydfZ 1838256 - 1838459 + | putative selenium carrying protein TERM 2483 1838466 - 1838489 + T 100 -11.8 -5.63103 | gap 1, overlap 1838469 ATGAACTAAGCGTGT G-AATGCCGCC GAT GGCGGCATTGC TTTTTTTACTTCACG TERM 2484 1838469 - 1838485 + T 100 -13.7 -4.07651 | overlap 1838466 AACTAAGCGTGTGAA TGCCGCC GAT GGCGGCA TTGCTTTTTTTACTT ydfI 1839955 - 1838495 - | putative mannonate dehydrogenase TERM 2485 1840036 - 1840013 - R 100 -9.6 -5.5353 | TATATGAATAAAAAA TCCCCTCTCC GGTA AGAGAAGGGA TGGAGGATTTACAGA ydfJ 1841328 - 1840045 - | putative transporter TERM 2486 1841574 - 1841607 + H 90 -9 -4.66953 | opp_overlap 1841574 AAATTTACCAGCCAA CCGCAG-CACGTTCTT GCAT AAGG-CGTGTCTGCGG TTTTTCAACTATTCA TERM 2487 1841675 - 1841687 + H 82 -4.9 -5.29445 | opp_overlap 1841666 AAGGCATATAGGCTA TATCA CCT TGATA TTTTTCTTCTTCAGA ydfK 1842081 - 1842347 + | conserved hypothetical protein; putative DNA-binding transcriptional regulator; Qin prophage pinR 1842664 - 1843254 + | putative site-specific recombinase; DNA invertase; Rac prophage tfaQ 1843927 - 1843352 - | putative tail fibre chaperone; Qin prophage TERM 2488 1843510 - 1843526 + g 100 -6.5 -5.80003 | overlap 1843513 CAATATGCTCACTGG CTACCTG CAT CAGGTTG TTTTTTGTTTCTTCC TERM 2489 1843513 - 1843523 + g 86 -6.8 -4.9072 | overlap 1843510 TATGCTCACTGGCTA CCTG CAT CAGG TTGTTTTTTGTTTCT ECUMN_1814 1846848 - 1843927 - | putative tail fiber protein TERM 2490 1845693 - 1845713 + g 72 -4.5 -4.63542 | opp_overlap 1845673, overlap 1845671 1845694 ATGACGCCGCCGAAC TGGCGGACG ATG CGGCAGCCG TTTTTGAGGATTCTG TERM 2491 1846002 - 1846016 + g 84 -7.8 -4.59853 | TCTCAGAAGACCTGG CGTTCG TCT CGGACG TTTTTGCCGCCTTCG TERM 2492 1846230 - 1846259 + g 100 -11.3 -4.59109 | overlap 1846231 TCGTTTCTGACGTTT TCGCGGCAGCGGC ACTG GTAGCTGCCGCGC TTTTTGAGGACTCTG TERM 2493 1846231 - 1846258 + g 100 -14.8 -3.34984 | overlap 1846230 CGTTTCTGACGTTTT CGCGGCAGCGGC ACTG GTAGCTGCCGCG CTTTTTGAGGACTCT TERM 2494 1846860 - 1846879 + r 79 -12.1 -2.79501 | opp_overlap 1846860 TCACCCCACAAAAAA GCCCGCC TGAACC GGCGGGC TGTCATAACACTGTG TERM 2495 1846879 - 1846860 - R 100 -12.1 -5.26316 | opp_overlap 1846860 TCACCCCACAAAAAA GCCCGCC TGAACC GGCGGGC TGTCATAACACTGTG ECUMN_1815 1847506 - 1846907 - | Putative Lom-like outer membrane protein of phage origin TERM 2496 1847554 - 1847537 - R 100 -11.3 -5.4505 | opp_overlap 1847536 1847535 1847553 TTCTGCAATAAAAAA GGCGTCA TTTC TGACGCC CGTTCTGGGTTATAA ECUMN_1816 1850971 - 1847573 - | Host specificity protein J TERM 2497 1849210 - 1849235 + g 72 -9.7 -3.30441 | GTACATGCTGCACGG CGGTGATGGCA TACG TGCCGTCGTCG TTCTCACGGATACTC TERM 2498 1850821 - 1850841 + g 90 -7.5 -4.7497 | CACTGTCCAGCACCG GCGTACTGT TCA GCAGCACGC TTTTTAATCCATCCA TERM 2499 1851015 - 1850992 - R 81 -11.8 -3.01125 | opp_overlap 1850997, overlap 1850997 ACGCTCCATAAACGA TAAAACCGCC CGGA GGCGGTTTCA CATAAAACATTTTGC TERM 2500 1850997 - 1851010 + r 77 -9.5 -3.60098 | opp_overlap 1850992 1850997 CCATAAACGATAAAA CCGCC CGGA GGCGG TTTCACATAAAACAT TERM 2501 1851010 - 1850997 - R 91 -9.5 -4.64846 | opp_overlap 1850997, overlap 1850992 CCATAAACGATAAAA CCGCC CGGA GGCGG TTTCACATAAAACAT ECUMN_1817 1851679 - 1851032 - | Tail assembly protein I from putative prophage ECUMN_1818 1852329 - 1851577 - | putative tail fiber component K of prophage TERM 2502 1851815 - 1851785 - GR 72 -5.2 -4.45945 | overlap 1851790 1851792 ACCGATGAACCAAAA CAGCACAGCAGCAC ATC GCCCGGCTGGGCCG CTGACAACGGCACCT TERM 2503 1852294 - 1852310 + gr 71 -9.5 -3.02649 | overlap 1852296 TCGCCGGGCGTGCGC CAGAATC GCT GATTCTG TCTCTGTCATGGGAT ECUMN_1819 1853024 - 1852326 - | Minor tail protein L TERM 2504 1852713 - 1852693 - G 90 -9.7 -4.42653 | overlap 1852695 ACCGCATCCAGAAAA CGGGCGTAA ACC TTACGCCTG ACCACCGTTCCGCCG TERM 2505 1852800 - 1852784 - G 72 -7.9 -3.89346 | CGTGCAGGTTAGAAA CCGTCAG TGT CGGACGG GCAGCACTGCCCTTG ECUMN_1820 1853363 - 1853034 - | Minor tail protein M TERM 2506 1853168 - 1853137 - G 100 -15.2 -3.35679 | overlap 1853155 GGCTTCCAGTCATAA GGTGGCGTCCAC TGAAATGC GCGGACGCCACC GTGCCGTTCCAGAAA ECUMN_1821 1856458 - 1853363 - | putative tail length tape measure protein from putative prophage TERM 2507 1856072 - 1856060 - GR 70 -4.7 -4.47328 | opp_overlap 1856061, overlap 1856061 AATCTGACGATAAAA CGCGG CAG CCGCT TTATCCTGAGCCTCC TERM 2508 1856061 - 1856071 + gr 74 -8.2 -3.96624 | opp_overlap 1856060 1856061 ATCTGACGATAAAAC GCGG CAG CCGC TTTATCCTGAGCCTC ECUMN_1822 1856729 - 1856400 - | putative minor tail protein T of putative prophage TERM 2509 1856526 - 1856513 - GR 74 -8.1 -4.07568 | TCTCTTCCGGTAAAA GGCTG AAAT CAGCC ACCGCAGCATCACTG ECUMN_1823 1857166 - 1856738 - | putative minor tail component of putative prophage TERM 2510 1857164 - 1857147 - G 100 -14.1 -5.03314 | TCCACCTGCAAAAAA GCCCCGG ATAA CCGGGGC AAATGATGAGTATCG ECUMN_1824 1857934 - 1857185 - | Major tail protein V ECUMN_1825 1858353 - 1857940 - | Minor tail protein U TERM 2511 1858287 - 1858270 - G 74 -3.3 -5.01732 | overlap 1858271 AAGCCCGTCAAAAAA CGTGGCG CTGT CTCCACA CTGTTCCCGAAGGCG ECUMN_1826 1858916 - 1858338 - | Minor tail protein Z (GPZ) of prophage TERM 2512 1858797 - 1858833 + g 72 -8 -3.86897 | gap 1 ATTCCCGGCAACCTG CCGGGTGGCGACCGAGA CCGC TTTCTGT-GCCACACGG TTTATCGCCCATGCG ECUMN_1827 1859203 - 1858928 - | conserved hypothetical protein from putative prophage TERM 2513 1859017 - 1859005 - G 70 -6.9 -4.06419 | GTCCGTCATAAACAA CGCGA TCC CCGCG CCGTGGGCGGTATCC ECUMN_1828 1859564 - 1859196 - | conserved hypothetical protein from putative prophage TERM 2514 1859453 - 1859488 + g 71 -2.4 -5.01845 | CCTGCACCAGATCTC CGCTGCTGATGGCTGC ACTG GCAACAATCGCCACCG TTTTTCCTTCTTCTA TERM 2515 1859533 - 1859551 + g 73 -11.7 -2.75844 | opp_overlap 1859522, overlap 1859532 1859535 ATAACTGTCTCCGCA CAGCCCC GTTCA GGGGCTG ATTTCAGGTACAAAA TERM 2516 1859581 - 1859570 - R 100 -7.2 -5.64274 | TCAGGTACAAAAAAA GCCC TTAC GGGC CATCAGAGTTGTTGT ECUMN_1829 1861726 - 1859606 - | putative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) TERM 2517 1861421 - 1861396 - GR 100 -14.1 -4.7373 | opp_overlap 1861416, overlap 1861416 TCAGTGCATTAAAAA TGGCGATGCCT TCAA AGACATCGCCA CCCGGTGAATTAATA ECUMN_1830 1863158 - 1861578 - | putative portal protein (head-tail preconnector protein) from putative prophage TERM 2518 1861648 - 1861689 + g 70 -5.1 -4.33165 | gap 1, overlap 1861649 CTGCTGCCTCCTTTA TCACTGGCCGGATC-GGTAT CAA ATACCAGATCCAGCTTGCGG TTTTCATCAATTTCG TERM 2519 1862450 - 1862470 + gr 90 -10.4 -4.37092 | gap 1 CTTTGGTTTCCATCT GCCG-CCCG GATA CGGGACGGC TTTTATACACCAGAT TERM 2520 1862591 - 1862565 - GR 74 -7.2 -4.1822 | opp_overlap 1862568, overlap 1862566 GGTCATGGGAATAAA GTCCGGCTCGAG CGC CTCCAGCCAGAA ATGAACACCGGCAGA TERM 2521 1862590 - 1862566 - GR 76 -10.7 -3.10611 | opp_overlap 1862568, overlap 1862565 GTCATGGGAATAAAG TCCGGCTCGAG CGC CTCCAGCCAGA AATGAACACCGGCAG ECUMN_1831 1863304 - 1863086 - | conserved hypothetical protein from putative prophage TERM 2522 1863150 - 1863138 - G 71 -10.5 -2.90075 | CGTCGTGTAATCAGA GCCGC AAG GCGGC GCTCCCACTCCTGCC ECUMN_1832 1865397 - 1863295 - | putative DNA packaging protein of putative prophage ( terminase large subunit) TERM 2523 1864549 - 1864530 - G 70 -6.4 -4.18018 | TTTGTTCAGGCAAAA TCCGTCCT GAAC AGGAAGGA CACTGAATATAAGCC ECUMN_1833 1865891 - 1865397 - | conserved hypothetical protein from putative prophage ybcW 1866660 - 1866454 - | conserved hypothetical protein; DLP12 prophage TERM 2524 1867225 - 1867213 - g 70 -4.9 -4.564 | AAGTTGAAATCAAAA GAAAT CAC ATTTC AACAATACAGGGAAA ybcV 1866946 - 1867371 + | conserved hypothetical protein; DLP12 prophage TERM 2525 1867493 - 1867478 - T 82 -6.8 -4.95302 | opp_overlap 1867478 TCAAATATAACAAAA CCCCGT AAAA ACGAGG TTTATGGATAAATTT gnsB 1867696 - 1867523 - | conserved hypothetical protein; Qin prophage ECUMN_1838 1868140 - 1867868 - | hypothetical protein TERM 2526 1868162 - 1868149 - R 91 -8.1 -5.31059 | opp_overlap 1868148 1868149 1868155 ATACCAAGCAAAAAA GCTCC CGAA GGAGC CTTCATTTTCACTTT cspI 1868582 - 1868370 - | cold shock protein; Qin prophage ydfP 1869443 - 1868946 - | conserved hypothetical protein; Qin prophage ydfQ 1869973 - 1869440 - | putative membrane-associated lysozyme; Qin prophage ydfR 1870257 - 1869970 - | conserved hypothetical protein; Qin prophage essQ 1870501 - 1870286 - | putative S lysis protein; Qin prophage TERM 2527 1870970 - 1870957 - R 100 -9.5 -5.60689 | opp_overlap 1870957 GCAGATAATAAAAAA CCCGC CTGA GCGGG TTTGAGATTGTGGTG TERM 2528 1870957 - 1870970 + r 77 -9.5 -3.70068 | opp_overlap 1870957 GCAGATAATAAAAAA CCCGC CTGA GCGGG TTTGAGATTGTGGTG cspB 1871470 - 1871255 - | cold shock protein; Qin prophage cspF 1871771 - 1871983 + | cold shock protein; Qin prophage TERM 2529 1872303 - 1872272 - T 95 -12.4 -3.64822 | opp_overlap 1872272 1872275 1872280, overlap 1872280 ATTGCCCCATTTAAA GCACAAAACCCGCT CATC AGCGGGTTTTCTAC TTTTTCTTAACGTCG TERM 2530 1872272 - 1872303 + T 93 -10.2 -5.08601 | opp_overlap 1872272 1872280, overlap 1872275 1872280 ATTGCCCCATTTAAA GCACAAAACCCGCT CATC AGCGGGTTTTCTAC TTTTTCTTAACGTCG TERM 2531 1872275 - 1872300 + T 76 -10.5 -3.39061 | opp_overlap 1872272 1872280, overlap 1872272 1872280 GCCCCATTTAAAGCA CAAAACCCGCT CATC AGCGGGTTTTC TACTTTTTCTTAACG TERM 2532 1872295 - 1872280 - T 91 -10.4 -4.62168 | opp_overlap 1872280 1872275 1872272, overlap 1872272 ATTTAAAGCACAAAA CCCGCT CATC AGCGGG TTTTCTACTTTTTCT TERM 2533 1872280 - 1872295 + T 91 -10.4 -4.73912 | opp_overlap 1872272 1872280, overlap 1872275 1872272 ATTTAAAGCACAAAA CCCGCT CATC AGCGGG TTTTCTACTTTTTCT ydfT 1873157 - 1872405 - | putative antitermination protein Q; Qin prophage ydfU 1874220 - 1873171 - | conserved hypothetical protein; Qin prophage TERM 2534 1874259 - 1874247 - R 73 -9.1 -3.53091 | overlap 1874214 ATCCGTTGCTGGAAA GTGCG GGA CGCAC GTGGTGGGCGTTCGG TERM 2535 1874464 - 1874435 - R 72 -9.9 -3.224 | opp_overlap 1874435 1874434, overlap 1874433 1874436 GAATGCGTGAGAATA CCGCCCGTGCGTG CAGG CAAGAACGGGCGA ATTATCAGAATTGTA TERM 2536 1874463 - 1874436 - R 77 -11.2 -2.53119 | opp_overlap 1874435 1874434, overlap 1874435 1874433 AATGCGTGAGAATAC CGCCCGTGCGTG CAGG CAAGAACGGGCG AATTATCAGAATTGT TERM 2537 1874492 - 1874521 + r 81 -11.4 -3.13403 | overlap 1874490 GTAATATTTTACGTT GCGTGCCATCGG TTTTCT CCGGTGGCACGG TGTTACTCAGCGGGA rem 1874818 - 1874567 - | conserved hypothetical protein; Qin prophage TERM 2538 1874951 - 1874964 + r 71 -9.5 -3.06183 | opp_overlap 1874951 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 2539 1874964 - 1874951 - R 100 -9.5 -5.77734 | opp_overlap 1874951 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG TERM 2540 1875001 - 1875032 + r 78 -10.8 -3.17229 | opp_overlap 1875001 1875003, overlap 1874987 1874999 ATGCCTGCCACATCA GAGGTGGCGAGGGA TTTC TCCCTCGCCGGGTC TCTTACTCCTCAGGT TERM 2541 1875161 - 1875176 + r 85 -9 -4.36411 | ACAGATGACGATCAG GGCGAT TAAC ATCGCC TTTTGCTGCTTCATA TERM 2542 1875255 - 1875305 + r 100 -12.1 -4.64844 | gap 1 TCTAGCATGAAATTG GCCTCAGATTAATGTTAAGCGTCT TGCA GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC ECUMN_1849 1875609 - 1875406 - | hypothetical protein TERM 2543 1875469 - 1875446 - G 70 -4.6 -4.4768 | overlap 1875448 TAGCAAGACAATAAA TCGCCATTAC AGCC GTAATAGCCA GCGCACATTTGAGAA TERM 2544 1877212 - 1877238 + G 77 -5.9 -4.7254 | gap 1, opp_overlap 1877211, overlap 1877214 ATGTTCATCAATCAT CCCTTCAT-CCC GTTT GGGCATGAAGAG TTTTTCATCAAGGGT ECUMN_1850 1875865 - 1877652 + | hypothetical protein ECUMN_1851 1878272 - 1877871 - | conserved hypothetical protein from phage origin ECUMN_1852 1879332 - 1878313 - | hypothetical protein TERM 2545 1878668 - 1878678 + gr 74 -2.4 -5.03314 | AGATCCTCCTGGCTA CCCC ACT GGCG TTTTTTCGCACTAAA TERM 2546 1878832 - 1878852 + gr 78 -8.3 -4.08767 | opp_overlap 1878845, overlap 1878816 1878833 ATCATCGGGCCATTT TGACCCGAT GAC ATTGGGTCG TTTTGAACCAATGGA TERM 2547 1878833 - 1878851 + gr 71 -9.6 -3.05046 | opp_overlap 1878845, overlap 1878816 1878832 TCATCGGGCCATTTT GACCCGAT GAC ATTGGGTC GTTTTGAACCAATGG ECUMN_1853 1879780 - 1879259 - | hypothetical protein ECUMN_1854 1880018 - 1879764 - | Repressor protein of division inhibition gene dicB dicA 1880018 - 1880476 + | putative repressor protein of division inhibition from phage origin ECUMN_1856 1880513 - 1880824 + | hypothetical protein TERM 2548 1880877 - 1880852 - gf 76 -7.5 -4.24963 | CACAATCATGGAAAA GGCTTACGAAG AATA CTTCGAAGGCC TTGCCGAAGGCGAAG TERM 2549 1881192 - 1881180 - gf 70 -6.3 -4.2704 | opp_overlap 1881182 TCCAGGACCAATAAA TCTCA CTT TGAGA GGGTGATTAATCCAC ECUMN_1857 1880784 - 1881401 + | hypothetical protein ECUMN_1859 1881783 - 1882076 + | putative regulator of cell division encoded by prophage ydfD 1882073 - 1882264 + | conserved hypothetical protein; Qin prophage TERM 2550 1883572 - 1883561 - g 71 -2.2 -4.89339 | AAGGACGGAGAAAAA TACG GTCG CGCA AACAAACTTTCTGGT TERM 2551 1884027 - 1884005 - g 88 -8.5 -4.67904 | gap 1 CAGGAAGTGGAAAAA GTCTGCACCG CCTG CGGT-CAGAC CGGCGGCGGCAACTG TERM 2552 1884641 - 1884624 - g 76 -12.7 -2.55351 | opp_overlap 1884619, overlap 1884623 GCCGTTCATACGAAC GGCAGGG GATC CCCTGCC CGTGGCGTTACTACA ECUMN_1861 1882358 - 1884829 + | putative exonuclease from phage origin xis 1884902 - 1885153 + | prophage excisionase TERM 2553 1885296 - 1885329 + G 72 -6.6 -4.16016 | opp_overlap 1885298 1885300, overlap 1885298 1885300 CCTGACACAGCAAAA AACAGGCGCGTTGC AGGTGA GCTACGCGCCTCTG TTTGTTACGCAATAA TERM 2554 1885298 - 1885327 + G 73 -9.2 -3.67877 | opp_overlap 1885298 1885300, overlap 1885296 1885300 TGACACAGCAAAAAA CAGGCGCGTTGC AGGTGA GCTACGCGCCTC TGTTTGTTACGCAAT TERM 2555 1885327 - 1885298 - g 100 -9.2 -5.24989 | opp_overlap 1885298 1885296 1885300, overlap 1885300 TGACACAGCAAAAAA CAGGCGCGTTGC AGGTGA GCTACGCGCCTC TGTTTGTTACGCAAT TERM 2556 1885300 - 1885325 + G 80 -11.8 -3.41738 | opp_overlap 1885298 1885300, overlap 1885298 1885296 ACACAGCAAAAAACA GGCGCGTTGC AGGTGA GCTACGCGCC TCTGTTTGTTACGCA TERM 2557 1885325 - 1885300 - g 93 -11.8 -4.24891 | opp_overlap 1885300 1885298 1885296, overlap 1885298 ACACAGCAAAAAACA GGCGCGTTGC AGGTGA GCTACGCGCC TCTGTTTGTTACGCA intQ 1885173 - 1886468 + | putative defective integrase; Qin prophage ynfP 1886598 - 1886488 - | hypothetical protein rspB 1887675 - 1886656 - | putative oxidoreductase, Zn-dependent and NAD(P)-binding rspA 1888901 - 1887687 - | putative enolase/dehydratase TERM 2558 1889021 - 1889006 - R 100 -4.6 -5.67063 | GTGATCACAAAAAAA GGCGTA TATT TGCGCC GTGAATGGTTGACAA ynfA 1889433 - 1889107 - | conserved hypothetical protein; putative inner membrane protein ynfB 1889568 - 1889909 + | hypothetical protein TERM 2559 1890351 - 1890334 - g 74 -3.4 -5.00412 | AAAGAGAATGAAAAA GCGATA CACATT TACCGC AAGCTTGGCTTTACG speG 1889944 - 1890504 + | spermidine N1-acetyltransferase ynfC 1891217 - 1890507 - | hypothetical protein ynfD 1891325 - 1891630 + | hypothetical protein TERM 2560 1891669 - 1891647 - f 81 -12 -3.08642 | opp_overlap 1891646 1891647 ACATTATCGACTGAA CGCCGGATAC GAC ACATCCGGCG ATTTGAACATACAAC TERM 2561 1891647 - 1891669 + F 74 -10.6 -2.74144 | opp_overlap 1891647, overlap 1891646 ACATTATCGACTGAA CGCCGGAT ACGACAC ATCCGGCG ATTTGAACATACAAC TERM 2562 1892592 - 1892573 - g 72 -5.6 -4.57073 | TATCTTCTTGAAAAA GCGCGCGA GAAA TCGAACGC AAAAATGATTGTTAT TERM 2563 1892857 - 1892844 - g 74 -5.9 -4.5265 | overlap 1892846 AAGGAGACGACAAAA CAGCG AAAA CGCCG CAGTGGGCTTCGCAA TERM 2564 1893677 - 1893651 - g 100 -3.1 -5.96521 | gap 1 ACGAATTAAAAAAAA TGGGTATCTATA AGCG TAAAGAT-CCCA ATGGTCATTTTGTCG ynfE 1891829 - 1894255 + | oxidoreductase subunit TERM 2565 1895273 - 1895259 - g 84 -3.5 -5.1861 | GTTACGATGAAAAAA CGCTG CCCGC CAACG CACCACGTAACGCGC TERM 2566 1895693 - 1895710 + G 76 -4.1 -4.93296 | opp_overlap 1895687 1895693 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2567 1895710 - 1895693 - g 86 -4.1 -5.45802 | opp_overlap 1895693, overlap 1895687 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2568 1896187 - 1896155 - g 85 -2.8 -5.45652 | overlap 1896135 ATCTTTAAGAAAAAA TGCCCGGAAGAAC-AC TAC GTCGCT-TTCCGCGCA TTCCGTGAAGATCCA TERM 2569 1896308 - 1896293 - g 86 -6.2 -5.15969 | TGGGAATTGAAAAAA GATGAA ATTA TTCATC CCCTTCCTGCGTATA ynfF 1894316 - 1896739 + | oxidoreductase subunit ynfG 1896750 - 1897367 + | oxidoreductase, Fe-S subunit TERM 2570 1897733 - 1897747 + G 78 -7.8 -4.3586 | GGTTACTTGTCAGCA TGGCGC TCG GCGTCA TTTTCGTCTGGATGA TERM 2571 1897874 - 1897888 + G 80 -11.4 -3.30701 | opp_overlap 1897858 TTGCTGCCGCAATTC TGCGGG CAG CCCGCA TTACATTTAATACCA ynfH 1897369 - 1898223 + | oxidoreductase, membrane subunit TERM 2572 1898230 - 1898249 + F 75 -9.2 -3.6106 | opp_overlap 1898229 1898228, overlap 1898231 GCAGGTTAACAAATT GGTGCGGG GCAA CCCGCACA TTTCAGGATGTTAGG TERM 2573 1898231 - 1898248 + F 82 -12.7 -2.76315 | opp_overlap 1898229 1898228, overlap 1898230 CAGGTTAACAAATTG GTGCGGG GCAA CCCGCAC ATTTCAGGATGTTAG TERM 2574 1898303 - 1898325 + G 95 -9.8 -4.65916 | overlap 1898301 ATAATTTTTCTGTCG CGGCGCGC GTGTTGG GCGCGCTG TTTTATTACGCTCCA TERM 2575 1898341 - 1898362 + G 70 -10.9 -2.74012 | gap 1, opp_overlap 1898345, overlap 1898344 TTTTATTACGCTCCA GAGAGTGCGG AAG CCGCAC-CTC TGGTTGCGGTACTCA TERM 2576 1898359 - 1898345 - g 75 -11.4 -2.8805 | opp_overlap 1898344 1898341 ATTACGCTCCAGAGA GTGCGG AAG CCGCAC CTCTGGTTGCGGTAC TERM 2577 1898416 - 1898441 + G 70 -6.9 -4.07568 | gap 1, opp_overlap 1898416 1898417, overlap 1898416 TGGCCTCTACCAGAA G-CGTCATTAGC GCC GCTGGTGACGGC TTTTCAGGCACAGAG TERM 2578 1898735 - 1898747 + G 72 -4.8 -4.70613 | CATGGCACCTTTTTC CGTG GTCAA CACG TTTTCTTGACGTTTT dmsD 1898266 - 1898880 + | twin-argninine leader-binding protein for DmsA and TorA TERM 2579 1900242 - 1900212 - g 77 -9.7 -3.64599 | opp_overlap 1900215, overlap 1900215 TGATGATATGTGAAA TGACCGGGGAGTA TCAGC TACTCCCCGGTTT ATTGATTGCCTGCGT TERM 2580 1900215 - 1900239 + G 100 -15.8 -4.33621 | opp_overlap 1900212 1900215 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG TERM 2581 1900239 - 1900215 - g 95 -15.8 -2.93585 | opp_overlap 1900215, overlap 1900212 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG clcB 1899074 - 1900330 + | putative voltage-gated chloride channel ynfK 1900978 - 1900283 - | putative synthase (similar to dethiobiotin synthetase) dgsA 1902323 - 1901103 - | DNA-binding transcriptional repressor TERM 2582 1901767 - 1901756 - G 72 -7.2 -4.19624 | opp_overlap 1901756 1901766 CATGCTGAATATAAA CCGG TACG CCGG TATGCTGCTCCAGCG TERM 2583 1901766 - 1901801 + g 72 -6.8 -4.21908 | gap 1, opp_overlap 1901756, overlap 1901756 1901770 ATAAACCGGTACGCC GGTATGCTGCTCCAGCG CCT CGCCG-AGCGGCATCTC TTTTACATCCTCGTA TERM 2584 1902061 - 1902035 - G 70 -4.4 -4.4773 | overlap 1902029 1902037 GCAGAGCAAGGAAAA TCTCCCCGCG ACTAATG CGCAGAGAAA GATAGTGCCAGGCTT ynfL 1903351 - 1902458 - | putative DNA-binding transcriptional regulator TERM 2585 1903294 - 1903269 - G 76 -11.1 -3.34398 | overlap 1903267 GGTGGTTGCGAAATA TTCAGGCGGGC AGCG GCGCGCCCGAA ATGCAGCTCTTCTGC ynfM 1903458 - 1904711 + | putative transporter; MFS type TERM 2586 1904716 - 1904751 + F 76 -10.7 -3.09516 | gap 2, opp_overlap 1904716, overlap 1904719 TGCACGCCTGAAAAA TAAGTCCGGACTGCGGT AAAT ACC-CA-TCCGGACTTA TTGCCTGCTCAAACC TERM 2587 1904751 - 1904716 - f 93 -10.7 -4.58395 | gap 2, opp_overlap 1904716 1904719 TGCACGCCTGAAAAA TAAGTCCGGACTGCGGT AAAT ACC-CA-TCCGGACTTA TTGCCTGCTCAAACC TERM 2588 1905295 - 1905285 - g 72 -6.8 -4.17477 | overlap 1905286 1905288 AAAAAACAGCATAAA GCAG CAC CTGC CCAGAAAGCGCAGGC asr 1905135 - 1905443 + | acid shock-inducible periplasmic protein TERM 2589 1905487 - 1905519 + F 71 -8.4 -3.53444 | opp_overlap 1905486 1905489, overlap 1905488 CTCGCGCCTGAAAAT TACGGTGCTAAGCG GGTAA CGTTTAGCACCGCC TTTAGCGGAGGGTAG TERM 2590 1905488 - 1905518 + F 79 -11.9 -2.71924 | opp_overlap 1905486 1905489, overlap 1905487 TCGCGCCTGAAAATT ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC CTTTAGCGGAGGGTA TERM 2591 1905517 - 1905489 - f 86 -13.2 -3.08032 | opp_overlap 1905488 1905487, overlap 1905486 CGCGCCTGAAAATTA CGGTGCTAAGCG GGTAA CGTTTAGCACCG CCTTTAGCGGAGGGT ydgD 1905719 - 1906540 + | putative exported metallopeptidase TERM 2592 1906581 - 1906541 - T 85 -9.1 -4.40561 | gap 1, opp_overlap 1906547 1906549, overlap 1906538 1906549 CTGTCGCAAAAATAA TGTTCAA-ACGCTGCCCG ACAGCG CGGGCAGCGTGTTCATCA GGCAAGTTTCACCAT TERM 2593 1906547 - 1906574 + T 86 -12.7 -3.14463 | opp_overlap 1906538 1906541 1906549, overlap 1906549 CAAAAATAATGTTCA AACGCTGCCCG ACAGCG CGGGCAGCGTG TTCATCAGGCAAGTT TERM 2594 1906572 - 1906549 - T 100 -15.3 -3.65722 | opp_overlap 1906547 1906549, overlap 1906538 1906541 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TGTTCATCAGGCAAG TERM 2595 1906549 - 1906572 + T 100 -15.3 -3.13403 | opp_overlap 1906549 1906538 1906541, overlap 1906547 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TGTTCATCAGGCAAG mdtI 1906908 - 1906579 - | multidrug efflux system transporter ECUMN_1886 1907265 - 1907089 - | hypothetical protein insH 1907125 - 1908141 + | IS5 transposase and trans-activator; CP4-44 prophage TERM 2596 1908581 - 1908571 - fH 72 -8.2 -3.92804 | overlap 1908572 GAAGAAAGGACTAAA GCGC GTT GCGC CAGTGCTGCTCACCT TERM 2597 1909740 - 1909755 + G 74 -3.2 -5.00765 | overlap 1909733 1909742 GCGTGGGCTGGGGCT TTCCAC ATTG GTGGTA TTTTTGTCGTTGATT ydgG 1908871 - 1909905 + | conserved hypothetical protein; putative inner membrane protein TERM 2598 1909929 - 1909900 - T 70 -6.3 -4.18488 | overlap 1909902 1909903 AGCGATCTCAATAAA GAGTGACGGCCTC CGCA GAGGCCGTCAGGG TTACAGAGCTTTCAG TERM 2599 1909927 - 1909902 - T 100 -13.3 -3.69068 | overlap 1909900 1909903 CGATCTCAATAAAGA GTGACGGCCTC CGCA GAGGCCGTCAG GGTTACAGAGCTTTC TERM 2600 1909926 - 1909903 - T 100 -16.8 -2.80958 | overlap 1909902 1909900 GATCTCAATAAAGAG TGACGGCCTC CGCA GAGGCCGTCA GGGTTACAGAGCTTT pntB 1911318 - 1909930 - | pyridine nucleotide transhydrogenase, beta subunit pntA 1912861 - 1911329 - | pyridine nucleotide transhydrogenase, alpha subunit TERM 2601 1914305 - 1914249 - g 70 -6 -4.15044 | gap 2, overlap 1914260 1914300 CGTGCCGCGAAGAAA GGTGCTAAGTATTACCACATCACCCGCC AGT GGCAGG-AACGTGGTAATAACCTG-ACC GTCAGCGCAGATCTG TERM 2602 1914295 - 1914260 - g 73 -12 -2.72855 | gap 1, overlap 1914249 GAAAGGTGCTAAGTA TTACCACATCACCCGCC AGT GGCAGG-AACGTGGTAA TAACCTGACCGTCAG ydgH 1913385 - 1914329 + | hypothetical protein TERM 2603 1914366 - 1914350 - f 80 -10.8 -3.31461 | opp_overlap 1914350 1914342 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2604 1914350 - 1914366 + F 85 -10.8 -3.81062 | opp_overlap 1914350, overlap 1914342 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2605 1914928 - 1914940 + G 73 -4.1 -4.77036 | TGCATCGGCTTTATT GTGGA TTG TTCAC TTTTTGATCCTGCGC ydgI 1914515 - 1915897 + | putative arginine/ornithine antiporter transporter TERM 2606 1916570 - 1916590 + G 76 -10.5 -3.34344 | opp_overlap 1916570, overlap 1916574 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGCTGC TERM 2607 1916590 - 1916570 - g 77 -8.3 -4.06419 | opp_overlap 1916570 1916574 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGCTGC folM 1915934 - 1916656 + | dihydrofolate reductase isozyme ydgC 1916988 - 1916653 - | conserved hypothetical protein; putative inner membrane protein associated with alginate biosynthesis rstA 1917108 - 1917836 + | DNA-binding response regulator in two-component regulatory system with RstB rstB 1917840 - 1919141 + | sensory histidine kinase in two-component regulatory system with RstA tus 1919217 - 1920146 + | inhibitor of replication at Ter, DNA-binding protein fumC 1921546 - 1920143 - | fumarate hydratase (fumarase C),aerobic Class II TERM 2608 1921666 - 1921683 + r 71 -8.3 -3.48884 | opp_overlap 1921667, overlap 1921664 1921662 1921667 GTGCCATGTAAAAAA ACCGCCC CGAA GGGCGGC TCTGTTTATTTCACA TERM 2609 1921682 - 1921667 - R 100 -11.8 -5.47218 | opp_overlap 1921667 1921666 1921664 1921662 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC TERM 2610 1921667 - 1921682 + r 79 -11.8 -2.68607 | opp_overlap 1921667, overlap 1921666 1921664 1921662 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC TERM 2611 1921693 - 1921718 + r 72 -8.3 -3.61902 | overlap 1921694 GGCGGCTCTGTTTAT TTCACACAGCG GGTG CACTGTGTGAG TTGTATCTGCTGGAA fumA 1923335 - 1921689 - | fumarate hydratase (fumarase A), aerobic Class I TERM 2612 1922054 - 1922035 - G 73 -9.3 -3.65812 | opp_overlap 1922034 1922033 GTTGGGCCAAGAGAA CCGGAAG CATAAC CTTCCGG CGTTTTGGCCGGACC TERM 2613 1922309 - 1922324 + g 72 -4.7 -4.66163 | CCGGGATATATTTGC CTGGA TTATGT TCCAG TTTTTCGATCCAAAT TERM 2614 1922723 - 1922735 + g 74 -7.7 -4.11623 | TTTTCAGTTTCCCCG GCGTT AGT AACGC TTTGGTTTCCTGATA TERM 2615 1923187 - 1923159 - G 72 -7.4 -3.97947 | overlap 1923174 CGGACGCAGCATAAA TGACGCATCATG AAACG CCTGACGCGCCA ACAAAGTTAACGCTT TERM 2616 1923269 - 1923287 + g 74 -2.4 -5.08824 | GTTCGCTGGTTAGCA GGTAATAC TCA GTATCATC TTTTTTGAGTGGAAA TERM 2617 1923744 - 1923783 + G 95 -15.2 -3.06583 | gap 1, opp_overlap 1923736, overlap 1923749 AAATCGACTCTGCTC GGAGAGGCCGTT-GCCAAA CGC TTTGGCGAACTGCCTTTCC TGTTCAAAGTATTAT TERM 2618 1923749 - 1923778 + G 81 -10.1 -3.92592 | gap 1, opp_overlap 1923736, overlap 1923744 GACTCTGCTCGGAGA GGCCGTT-GCCAAA CGC TTTGGCGAACTGCC TTTCCTGTTCAAAGT manA 1923534 - 1924709 + | mannose-6-phosphate isomerase TERM 2619 1924767 - 1924787 + F 100 -12.6 -4.27483 | opp_overlap 1924762 1924765 1924764 AGGCTTATAACACCT TCAGGCGG CCAGT CCGCCTGA TTTCATTTTATGGAT TERM 2620 1925337 - 1925320 - g 73 -4 -4.86773 | overlap 1925321 1925322 CAAAAGGATGAAAAA GTCGCC TTTAGC GGCGGC GAGTTCCAGTTAAAT TERM 2621 1925986 - 1925968 - g 74 -8.1 -4.04927 | gap 1 GCAACGACTAAAGAA GCGCC-GC AAAC GCTGGCGC AGGAAGTAGATCGTT ydgA 1924810 - 1926318 + | hypothetical protein TERM 2622 1926329 - 1926358 + T 87 -10 -4.3255 | opp_overlap 1926332, overlap 1926332 AGTAATTCACAGCCA AAACGCCGGAGG TTTTTC TCTCCGGCGTTA TTTCTTACTTCAGCA TERM 2623 1926332 - 1926355 + T 95 -11.7 -4.27694 | opp_overlap 1926332, overlap 1926329 AATTCACAGCCAAAA CGCCGGAGG TTTTTC TCTCCGGCG TTATTTCTTACTTCA TERM 2624 1926355 - 1926332 - T 88 -11 -4.24606 | opp_overlap 1926332 1926329 AATTCACAGCCAAAA CGCCGGAG GTTTTTCT CTCCGGCG TTATTTCTTACTTCA uidC 1927628 - 1926363 - | outer membrane porin protein for glucuronides transport uidB 1929040 - 1927667 - | glucuronide transporter TERM 2625 1928586 - 1928620 + g 100 -14.3 -3.70853 | gap 1, opp_overlap 1928577 1928578 AATGAAGCGGCAATC CCACGAGC-CGCGCCC AGAC GGGCGCGGGATTGTGG TTGTTGGGTCATTGC uidA 1930848 - 1929037 - | beta-D-glucuronidase TERM 2626 1929633 - 1929646 + g 73 -3.8 -4.82901 | opp_overlap 1929633, overlap 1929631 CAATACTCCACATCA CCAC GCTTGG GTGG TTTTTGTCACGCGCA TERM 2627 1930702 - 1930724 + g 72 -6.2 -4.30719 | opp_overlap 1930701 CTGATCGTTAAAACT GCCCGGCA CAGCAAT TGCCCGGC TTTCTTGTAACACGC TERM 2628 1930910 - 1930924 + r 72 -8.6 -3.58726 | opp_overlap 1930909 ATTAGTTAACCAATT CTGTGT TGC ACACAG TTATCTGTGAGAAAC TERM 2629 1931223 - 1931197 - R 86 -10.9 -3.87318 | gap 1 AATTACGATATGAAA CGCGGGCTCAGT TGTC ACC-AGCCCGCG GAAAGAGAGAGAGGA uidR 1931829 - 1931239 - | DNA-binding transcriptional repressor TERM 2630 1932007 - 1932037 + r 87 -14.2 -2.604 | overlap 1932004 1932003 GTTGATGAGTTTATC CCGGTAAACAAC ACGCACG GTTGTTTACCGG TCCGTTAGTGTATTA hdhA 1932817 - 1932050 - | 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent TERM 2631 1932867 - 1932851 - R 82 -5.1 -5.3104 | opp_overlap 1932860 TCAGTAAAAATAAAA GGCAC CGCCTGT GTGCC ACATTTTTTATCATT TERM 2632 1932860 - 1932870 + r 87 -5.4 -5.37345 | opp_overlap 1932851 ATAAAAGGCACCGCC TGTG TGC CACA TTTTTTATCATTAAC malI 1933957 - 1932929 - | DNA-binding transcriptional repressor TERM 2633 1934499 - 1934489 - g 72 -6.8 -4.24342 | TGGTTGACCAACAAA GGCA TTC TGCC AACCACTGACGCCGC TERM 2634 1934566 - 1934597 + G 74 -10.2 -3.47573 | gap 1 GATCCAGTCGATCGA TACCGG-GATCCTCG GTG CGGTGATCGCCGGTA TTATCGTCTGGATGC malX 1934132 - 1935724 + | fused maltose and glucose-specific PTS enzymes: IIB and IIC components malY 1935734 - 1936906 + | bifunctional beta-cystathionase, PLP-dependent and regulator of maltose regulon TERM 2635 1936906 - 1936947 + F 89 -8.7 -4.652 | overlap 1936907 CCGCGCTGTTCGTTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA TTTTTACCCTGCTTT TERM 2636 1936907 - 1936946 + F 85 -12.2 -3.38036 | overlap 1936906 CGCGCTGTTCGTTAA CCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGG ATTTTTACCCTGCTT TERM 2637 1937287 - 1937267 - g 74 -11.1 -3.20387 | opp_overlap 1937266 1937267 1937268, overlap 1937265 TGAAAACATTGAAGA TGCAGCCCG TCA CGGCCTGCA CTATGTCGAGCTGCG TERM 2638 1937991 - 1937979 - g 75 -4.7 -4.80882 | AGCGCAGAGGAAAAA CGCGC ACT GCGAG AAAAAGTCGCTGCGA add 1937010 - 1938011 + | adenosine deaminase TERM 2639 1938042 - 1938018 - T 100 -10 -5.1963 | opp_overlap 1938017 1938019, overlap 1938019 GCGAAGTAACAAAAA TGGATGGTGC TAATT GCACCATCCT CTTTTCACGCAAGGC TERM 2640 1938019 - 1938041 + T 100 -13.5 -3.63744 | opp_overlap 1938019 1938018, overlap 1938017 CGAAGTAACAAAAAT GGATGGTGC TAATT GCACCATCC TCTTTTCACGCAAGG TERM 2641 1938041 - 1938019 - T 100 -13.5 -3.70694 | opp_overlap 1938017 1938019, overlap 1938018 CGAAGTAACAAAAAT GGATGGTGC TAATT GCACCATCC TCTTTTCACGCAAGG ydgJ 1939087 - 1938047 - | putative oxidoreductase blr 1939255 - 1939455 + | beta-lactam resistance membrane protein TERM 2642 1939476 - 1939498 + F 73 -6.3 -4.3208 | gap 1 GCGCTTGTAGAGCGA CATGCTGCCC GTCC GGGT-GCATG TTTTCACTTGTCGGA ydgT 1939728 - 1939943 + | post-transcriptional regulator TERM 2643 1940067 - 1940086 + G 75 -7 -4.3014 | overlap 1940071 TATTGGAGGCTGGTT GCTTGGCC CATT GGCCTGGC TTTTAGTCGCTCTGT ydgK 1940029 - 1940469 + | conserved hypothetical protein; putative inner membrane protein rsxA 1940546 - 1941127 + | putative inner membrane subunit of an electron transport system rsxB 1941127 - 1941705 + | putative iron-sulfur protein TERM 2644 1941746 - 1941730 - g 87 -4.5 -5.28176 | overlap 1941736 TGCATTCAGAAAAAA TAAAATC TGG GATTTCA ACGGCGGCATCCATC TERM 2645 1941795 - 1941822 + G 100 -12.7 -4.4648 | overlap 1941797 AGTCCAACGGTACGC CCCTGCGCCAG GTACCA CTGGCGCAGCG TTTTGTCATACCACT TERM 2646 1941797 - 1941820 + G 84 -13.9 -2.56122 | overlap 1941795 TCCAACGGTACGCCC CTGCGCCAG GTACCA CTGGCGCAG CGTTTTGTCATACCA TERM 2647 1942211 - 1942197 - g 72 -8.6 -3.80142 | GAGATAAGATTGAAA CGTTGA TTA TCAACG CTGCTGAGTGCGAGC TERM 2648 1943859 - 1943846 - g 71 -9.5 -3.54543 | opp_overlap 1943846 ATTGATCCGCGCAAA GCGGC AGTT GCCGC GGCTATTGCCCGCGT rsxC 1941698 - 1943920 + | putative 4Fe-4S ferredoxin-type protein fused with unknown protein TERM 2649 1944015 - 1944031 + G 79 -2.2 -5.27477 | opp_overlap 1944015, overlap 1944016 CAGCCGTGCCAGGAA TCGCAG CGCAA CTGTGG TTTTTTGGTTGGGGT TERM 2650 1944802 - 1944821 + G 70 -6.4 -4.17048 | overlap 1944801 1944804 CCCGGTTACTGCTTC TACGACCA ATCG TGGTCGTC TTATTTTCGGCGCGC TERM 2651 1944804 - 1944819 + G 73 -9 -3.68435 | overlap 1944801 1944802 CGGTTACTGCTTCTA CGACCA ATCG TGGTCG TCTTATTTTCGGCGC rsxD 1943921 - 1944979 + | putative inner membrane oxidoreductase rsxG 1944983 - 1945603 + | putative oxidoreductase TERM 2652 1945997 - 1945973 - g 74 -3.4 -5.00616 | opp_overlap 1945973, overlap 1945974 TTCGCCGCCAAAAAA GGTCCGGCGC TTTCG GCACTGGACG GCTTTTCAATTGGTA TERM 2653 1946015 - 1946029 + G 72 -11.4 -2.50195 | overlap 1946014 1946011 1946016 TTTTCAATTGGTATG GGCGCA ACC TGCGCC ATGTTCGTGCTGGGT rsxE 1945607 - 1946302 + | putative inner membrane NADH-quinone reductase nth 1946302 - 1946937 + | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) TERM 2654 1946963 - 1946944 - f 89 -8.6 -4.6759 | opp_overlap 1946944 1946943 AACATCTGAAGAAAA GGGGTAAC ACCG ATTACCCC ATTCATAACCTTTCT TERM 2655 1947589 - 1947569 - g 76 -4 -4.99134 | opp_overlap 1947573 1947579, overlap 1947573 1947574 1947580 ACTGCAAACCAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTCAAACAA TERM 2656 1947600 - 1947573 - g 74 -8.6 -3.90592 | gap 1, opp_overlap 1947573 1947579 1947589 1947592, overlap 1947569 1947574 1947580 CAAACCAAAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAGGCGTT TERM 2657 1947995 - 1947979 - g 76 -3.5 -4.91511 | opp_overlap 1947994 ATGCTATGAGAAAAA CGACCCG CGT CTGGACG GTGCATTCACCATGT TERM 2658 1948584 - 1948619 + G 70 -11.2 -2.7924 | gap 1, opp_overlap 1948576, overlap 1948579 1948577 ACAAGATGGGCGATA CCCTGCCGA-TGCCAAC CAA GTTTGCAATCGGCATGG TGATGTGTTCTGGTG ydgR 1947548 - 1949050 + | putative oligopeptide transporter TERM 2659 1949096 - 1949074 - f 100 -13.5 -3.30635 | opp_overlap 1949074 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTTGTTCAG TERM 2660 1949074 - 1949096 + F 100 -13.5 -6.36459 | opp_overlap 1949074 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTTGTTCAG TERM 2661 1949273 - 1949261 - g 84 -4.1 -5.28481 | opp_overlap 1949261 GATTTAATGAAAAAA CGTCT CGA AAACG GTGACGATTACTTTG TERM 2662 1949446 - 1949436 - g 70 -5.4 -4.36914 | TTTCCCGCTATAAAA CCAT CGA ATGG CTGAATTACATCGCC gst 1949156 - 1949761 + | glutathionine S-transferase pdxY 1950668 - 1949805 - | pyridoxal kinase 2/pyridoxine kinase TERM 2663 1950714 - 1950685 - R 95 -10.7 -4.82901 | opp_overlap 1950688, overlap 1950686 1950688 TTCCCTGTATAAAAA CCAGGGGGAGTGA TTTC TCACTCCCCCTTT CCACTTAATGCATTA TERM 2664 1950713 - 1950686 - R 100 -14.2 -3.49419 | opp_overlap 1950688, overlap 1950685 1950688 TCCCTGTATAAAAAC CAGGGGGAGTGA TTTC TCACTCCCCCTT TCCACTTAATGCATT TERM 2665 1950688 - 1950711 + r 100 -16.8 -3.67976 | opp_overlap 1950686 1950685 1950688 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA TERM 2666 1950711 - 1950688 - R 100 -16.8 -3.31915 | opp_overlap 1950688, overlap 1950686 1950685 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA tyrS 1952001 - 1950727 - | tyrosyl-tRNA synthetase TERM 2667 1951109 - 1951126 + g 84 -4.1 -5.21506 | gap 1, overlap 1951084 1951081 1951106 1951110 AGTACATACTGGGCG C-GCGGTG CTT TACCGCTG TTTTTATCTTCTTCT TERM 2668 1951110 - 1951124 + g 76 -7.8 -4.20977 | overlap 1951084 1951081 1951106 1951109 GTACATACTGGGCGC GCGGTG CTT TACCGC TGTTTTTATCTTCTT pdxH 1952786 - 1952130 - | pyridoxine 5'-phosphate oxidase TERM 2669 1952209 - 1952184 - G 73 -4 -4.83169 | gap 1 ACGCTGGTACAAAAA GCGGTCATGCA GGCGA TGC-TCACCGC CCTGCCAGAACTCAA TERM 2670 1952534 - 1952555 + g 81 -5.9 -4.78107 | gap 1, overlap 1952537 CTTTACGGCTGCCGA GGT-TGGTGT AAA ACACCATGCC TTTTTCGTCGTAATG TERM 2671 1952714 - 1952729 + g 72 -7.5 -3.93262 | overlap 1952726 CGGCGGGAAGATCGC GGCGG CGTAAT CCGCC TTTGGTGTATTCACG ydhA 1953174 - 1952845 - | putative lipoprotein anmK 1954381 - 1953272 - | anhydro-N-acetylmuramic acid kinase TERM 2672 1953398 - 1953436 + g 100 -16.8 -3.51924 | opp_overlap 1953412 AGCCAATGCTTCCAT GTCATCGCCACTAATGCC AAC GGCATCGGTGGTGGTGAC TTCTGTGCCTGGCAG slyB 1954655 - 1955122 + | putative outer membrane lipoprotein TERM 2673 1955124 - 1955166 + T 72 -8.5 -3.63968 | gap 1, opp_overlap 1955127, overlap 1955116 1955127 TTTCCCCGCGCTAAA T-AAGTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCCTTCA TTTCACCCTTTGGCC TERM 2674 1955162 - 1955127 - T 93 -11.8 -3.90744 | opp_overlap 1955124 1955116 1955127 CCCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT TERM 2675 1955127 - 1955162 + T 88 -11.8 -3.5332 | opp_overlap 1955127, overlap 1955124 1955116 CCCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT slyA 1955603 - 1955169 - | DNA-binding transcriptional activator ydhI 1955804 - 1956040 + | conserved hypothetical protein; putative inner membrane protein TERM 2676 1956709 - 1956695 - g 73 -4.2 -4.79955 | opp_overlap 1956695 ATAGTGATAACAAAA CGTTAC AGG GTCACG TTTCCAGTATCGGTC ydhJ 1956043 - 1956900 + | undecaprenyl pyrophosphate phosphatase TERM 2677 1958393 - 1958424 + G 70 -5.8 -4.18197 | gap 1, overlap 1958390 TCTGGCAAAAATCGT TGGCGTTGCGCTGGC GTG GTTAGCGTT-CGCCA TTTTGCGTCCAGGGT TERM 2678 1958819 - 1958840 + G 73 -11.5 -2.6914 | opp_overlap 1958818 1958817, overlap 1958818 1958820 CCGCCATCATCAACC TGCCGCCCG CGAG CTGGCGGCA ATTGTCTGGCGGCTG ydhK 1956900 - 1958912 + | conserved hypothetical protein; putative inner membrane protein sodC 1959434 - 1958913 - | superoxide dismutase, Cu, Zn TERM 2679 1958950 - 1958960 + g 72 -8.2 -3.78329 | opp_overlap 1958931 TAGCGTTCACCGCCA CCGC CCA GCGG TTTAGGTTGATCGGA TERM 2680 1959161 - 1959188 + g 81 -11.2 -3.69902 | gap 1, opp_overlap 1959160 1959158, overlap 1959183 1959185 TTTGTGGATCAAGAT GCCCGC-CTGCGG ATT CCGCGGCGCTGGC TTTGCCATCTTTGGT ydhF 1960411 - 1959515 - | putative oxidoreductase TERM 2681 1959925 - 1959913 - G 81 -9.1 -4.13767 | GGCGTGATTGCAAAA GCGCA AAT TGCGC AGGCGTAAAGTTCGA ydhM 1960887 - 1961402 + | putative DNA-binding transcriptional regulator TERM 2682 1961389 - 1961408 + F 82 -4.9 -5.24129 | overlap 1961390 AAACCATTATTGCGA CGCCTGC CGTTTA GCAGGCA TTTTTTATCACCAGA TERM 2683 1961390 - 1961407 + F 75 -8.4 -3.73995 | overlap 1961389 AACCATTATTGCGAC GCCTGC CGTTTA GCAGGC ATTTTTTATCACCAG TERM 2684 1962380 - 1962363 - g 73 -4.1 -4.8667 | TACACGGTAGAAAAA GCCGA AACGCTGA TCGGC AAAGGGTTAATTGAT nemA 1961439 - 1962536 + | N-ethylmaleimide reductase, FMN-linked TERM 2685 1962895 - 1962882 - g 71 -2.3 -5.01732 | overlap 1962883 1962892 AAGCGTGCGAAAAAA TCCGT CAAA ACGGG GGTAACGTCACCCGT gloA 1962617 - 1963024 + | glyoxalase I, Ni-dependent TERM 2686 1963030 - 1963057 + F 75 -9.9 -3.46647 | gap 1, overlap 1963028 GGGCAACTAATCTCC TGCCGGGCGTGA ACTCA TCGCGCCCG-CA TCTTTACTGCATCGA TERM 2687 1963150 - 1963164 + G 77 -7.1 -4.45077 | opp_overlap 1963149 TAACGCTCAACTTAC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA rnt 1963127 - 1963774 + | ribonuclease T (RNase T) TERM 2688 1965064 - 1965076 + G 72 -6.9 -4.19624 | GATCTGGTGATTCAG GTGGC AAC GCCGC TTTCTGTTGCCAGTG TERM 2689 1968136 - 1968114 - g 73 -11.3 -2.81118 | overlap 1968103 1968113 1968127 1968130 ACAAGCCACGCAAAC GCGCCACTA TACAC CAGTGGCGC TCTCCGCCAACGATC lhr 1963867 - 1968483 + | putative ATP-dependent helicase TERM 2690 1968519 - 1968492 - T 100 -15.7 -4.18674 | opp_overlap 1968512 GGGATAGATAAAGAA CTGACGGATGC CCGTTC GCATCCGTCAG TACTGCAGGACGGAT ydhD 1968881 - 1968534 - | monothiol glutaredoxin TERM 2691 1969534 - 1969523 - g 70 -3.6 -4.63486 | overlap 1969510 1969509 ACGCCGTCAATAAAA CGGC CTCA GCCA GCTTTACCGAAAAGT TERM 2692 1969625 - 1969596 - g 90 -7.9 -4.81249 | gap 1 TGTGAAAGTCAAAAA TGCCGCGTCAGGAA CTC TTGCCGACGCG-CA CAAAGCGAAGGTGCA TERM 2693 1969658 - 1969645 - g 84 -8.1 -4.62471 | GCGAAGGTGCAAAAA GCCAC GAAA GTGGC AATGAATAAACTGAT ydhO 1969216 - 1970043 + | putative exported hydrolase TERM 2694 1970076 - 1970046 - f 80 -9.2 -4.09511 | gap 1, opp_overlap 1970042 1970047 1970048, overlap 1970047 AACACTTCGCTAAAA CTTTACCCTGTTG TTACGG CAACAGGGT-AAG TTCATCTTTTGTCTC TERM 2695 1970076 - 1970047 - f 71 -9.4 -3.05224 | opp_overlap 1970042 1970047 1970048, overlap 1970046 ACACTTCGCTAAAAC TTTACCCTGTTG TTACGG CAACAGGGTAAG TTCATCTTTTGTCTC TERM 2696 1970047 - 1970076 + F 95 -12.3 -3.59432 | opp_overlap 1970046 1970047, overlap 1970042 1970048 ACACTTCGCTAAAAC TTTACCCTGTTGT TACG GCAACAGGGTAAG TTCATCTTTTGTCTC TERM 2697 1970048 - 1970075 + F 86 -13.6 -2.74575 | opp_overlap 1970046 1970047, overlap 1970047 1970042 CACTTCGCTAAAACT TTACCCTGTTGT TACG GCAACAGGGTAA GTTCATCTTTTGTCT sodB 1970171 - 1970752 + | superoxide dismutase, Fe TERM 2698 1970865 - 1970886 + T 100 -14.5 -5.38326 | opp_overlap 1970859 1970869 TGCCAGCAACTGTAA CGCAGAAGG TTAT CCTTCTGCG TTTTTATTTAATTAG ydhP 1972067 - 1970898 - | putative efflux protein; MFS family TERM 2699 1971502 - 1971521 + g 73 -9.2 -3.68351 | TCTTTTTTCACTTCA GGTCGCGC CCCT GCGCCACC TTTAGGTAATGAGAA TERM 2700 1972085 - 1972100 + H 70 -9 -3.24825 | overlap 1972084 CTTATCTCCACCTCT TCGCGT CATT ACGCGA TATTCATTAAAGTGG TERM 2701 1972184 - 1972150 - H 70 -3 -4.96276 | ACAAAAAAATGAAAA TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA ACAAACAGGAAGGAG TERM 2702 1972670 - 1972636 - g 79 -4.4 -4.90079 | gap 1, opp_overlap 1972636, overlap 1972638 ATGGCAACAATAAAA GATGTAGC-GAAACG AGCAAA CGTTTCCACTACAAC TGTGTCACACGTGAT TERM 2703 1972718 - 1972694 - g 91 -9.3 -4.71828 | overlap 1972715 ACGTGATCAACAAAA CACGTTTCGTC GCT GAAGAAACGCG CAACGCCGTGTGGGC TERM 2704 1973158 - 1973146 - g 72 -10.5 -3.06796 | CGTTATCTGATTGAA CGCGG TCA CCGCG AAATCGGCGTTATCC TERM 2705 1973195 - 1973216 + G 81 -8.7 -4.37092 | gap 1, opp_overlap 1973195 1973193 CGCTGGAACGTAACA CCGGCGCAGG CCG CCT-TGCCGG TTTTATGAAGGCGAT TERM 2706 1973519 - 1973503 - g 70 -6.5 -4.21462 | overlap 1973505 ATCCATCAGCCAAAA GATTCGC TGG GCGAAAC GGCGTTCAACATGCT purR 1972621 - 1973646 + | DNA-binding transcriptional repressor, hypoxanthine-binding ydhB 1974575 - 1973643 - | putative DNA-binding transcriptional regulator; LysR-type ydhC 1974688 - 1975899 + | putative transporter; MFS superfamily cfa 1976190 - 1977338 + | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) TERM 2707 1977350 - 1977370 + T 100 -14 -3.60475 | opp_overlap 1977340 CTAAAGGCTATTCTA TCGCCCCC TCTCC GGGGGCGA TTTCAGATCAGGCTT ribC 1978019 - 1977378 - | riboflavin synthase, alpha subunit TERM 2708 1978176 - 1978193 + H 80 -6.2 -4.85129 | overlap 1978191 CTGCTTCTTCTTTTT GCTGCC CATTCA GGCGGC TTTTTAGTCTCTCAT mdtK 1978234 - 1979607 + | multidrug efflux system transporter TERM 2709 1979614 - 1979644 + T 77 -6.9 -4.57073 | gap 1, opp_overlap 1979617, overlap 1979617 GCTCGCTAGTAAAGA CA-AGGCGCAAACT TCAC GGGTTGCGCCTGTG TTTTTACGCAGGCTG TERM 2710 1979617 - 1979640 + T 71 -8.8 -3.53855 | opp_overlap 1979617, overlap 1979614 CGCTAGTAAAGACAA GGCGCAAACT TCAC GGGTTGCGCC TGTGTTTTTACGCAG TERM 2711 1979640 - 1979617 - T 72 -8.1 -3.86252 | opp_overlap 1979617 1979614 CGCTAGTAAAGACAA GGCGCAAAC TTCACG GGTTGCGCC TGTGTTTTTACGCAG ydhQ 1980904 - 1979648 - | hypothetical protein TERM 2712 1981082 - 1981071 - H 71 -2.2 -5.07486 | overlap 1981054 GATCCTGAATAAAAA TCGC CCTT GCAA ATCAACAAAATATAG TERM 2713 1981341 - 1981372 + H 80 -6.7 -4.76075 | gap 2, overlap 1981366 1981368 TTGACATGGTGGGGG TC-GGTG-GTTCGAG TCCA CTCGGACGCACCAGA TTTTCTTAATCTGGT TERM 2714 1981628 - 1981640 + G 78 -5.5 -4.77036 | opp_overlap 1981618 AAGAACCACGAAGCC GGTGG GAT CTACC TTTTTACTGATGAAA ydhR 1981478 - 1981783 + | hypothetical protein TERM 2715 1981783 - 1981765 - f 75 -9.6 -3.54676 | opp_overlap 1981761, overlap 1981761 ACTTAGTCAAATCAA TCAGGCAA AAC TCGCCTGA CAGAATTTAATCAAG TERM 2716 1981812 - 1981798 - f 71 -8.5 -3.42379 | opp_overlap 1981798 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTCATCCCTGTCT TERM 2717 1981798 - 1981812 + F 84 -8.5 -4.3014 | opp_overlap 1981798 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTCATCCCTGTCT TERM 2718 1982089 - 1982063 - g 71 -2.2 -4.88222 | opp_overlap 1982068, overlap 1982064 1982066 AGGAAAACTCAAAAA TGATGCTGGCAA ATA TTGCCAGTATTG AAATACCGCCGATTT TERM 2719 1982068 - 1982084 + G 72 -10.9 -3.05844 | opp_overlap 1982066 1982064 1982063 AACTCAAAAATGATG CTGGCAA ATA TTGCCAG TATTGAAATACCGCC TERM 2720 1983319 - 1983302 - g 72 -4.9 -4.6391 | gap 1, opp_overlap 1983305, overlap 1983305 AACAATTACAGAAAA CAGGGGAT GAA ATCCC-TG ATGTTGGCGAAGATT ydhS 1981909 - 1983513 + | conserved hypothetical protein; putative FAD/NAD(P)-binding domain ydhT 1984337 - 1983525 - | hypothetical protein ydhU 1985126 - 1984341 - | putative cytochrome b subunit of a reductase ydhX 1985791 - 1985123 - | putative 4Fe-4S ferridoxin-type subunit of oxidoreductase ydhW 1986502 - 1985855 - | hypothetical protein ydhV 1988608 - 1986506 - | putative ferredoxin:oxidoreductase subunit TERM 2721 1986599 - 1986612 + g 70 -4.5 -4.55295 | CGGACAACCAAGCAG TGGGT CCCA GCCCA TTTCTTTGTAGAACA TERM 2722 1988332 - 1988318 - G 76 -4.2 -5.00616 | TTGCGCTGCAAAAAA GCCC CCCATAT GGGC ATCGACGACTAAATT ydhY 1989255 - 1988629 - | putative 4Fe-4S ferridoxin-type subunit of oxidoreductase TERM 2723 1989440 - 1989430 - R 76 -2.6 -5.31275 | opp_overlap 1989430 GGTTAGGAGAAAAAA TAAT GTG ATTA TTCTGGGCCCTTAAC TERM 2724 1989707 - 1989676 - R 77 -8.9 -3.83675 | gap 1, opp_overlap 1989673, overlap 1989678 CAACTGAAGCAAGAA TATCAGGATGAAGC TTACC GCCTCATCCTGA-A TGGTCATTTTACCAG TERM 2725 1989706 - 1989678 - R 100 -14 -3.4945 | opp_overlap 1989673, overlap 1989676 ACTGAAGCAAGAATA TCAGGATGAAGC TTACC GCCTCATCCTGA ATGGTCATTTTACCA ydhZ 1989920 - 1989711 - | hypothetical protein TERM 2726 1991437 - 1991449 + G 81 -9.1 -4.08706 | opp_overlap 1991437 1991436 1991434 GCAAAAGGTAAATAC CCGCT GGA AGCGG TTTCTATCATGGCGA pykF 1990477 - 1991889 + | pyruvate kinase I TERM 2727 1991922 - 1991937 + F 100 -11.8 -5.99154 | opp_overlap 1991922 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2728 1991937 - 1991922 - f 81 -11.8 -3.12847 | opp_overlap 1991922 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2729 1992362 - 1992337 - g 70 -9.7 -3.17212 | gap 1 TGACCAGCTGAGCAA CGACGTGAACGC AAT GCGTTC-CGACG TTCAGGCTGCTAAAG lpp 1992200 - 1992436 + | murein lipoprotein TERM 2730 1992476 - 1992458 - T 100 -14.6 -4.74103 | opp_overlap 1992458 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTTGCCTGCC TERM 2731 1992458 - 1992476 + T 100 -14.6 -5.81412 | opp_overlap 1992458 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTTGCCTGCC ynhG 1993504 - 1992500 - | hypothetical protein sufE 1994069 - 1993653 - | sulfur acceptor protein sufS 1995302 - 1994082 - | selenocysteine lyase, PLP-dependent TERM 2732 1994749 - 1994760 + g 70 -5.8 -4.27316 | GCAAGCGTGATCATT TCCG CCAG CGGA TTTTCCGTTCCCAGC sufD 1996570 - 1995299 - | component of SufBCD complex sufC 1997291 - 1996545 - | component of SufBCD complex, ATP-binding component of ABC superfamily sufB 1998788 - 1997301 - | component of SufBCD complex TERM 2733 1998370 - 1998356 - G 72 -7.1 -4.20074 | opp_overlap 1998355 AAACAGAGTCGAAAA TGGCG TCCAC CGCCA CCTCTTTGCCTTCCC TERM 2734 1998449 - 1998438 - G 81 -7.2 -4.65895 | opp_overlap 1998437 CTCTTTACTTAAAAA GGCG TTCG CGCC AGTTTGCTGCACCGC sufA 1999165 - 1998797 - | Fe-S cluster assembly protein TERM 2735 1999488 - 1999458 - R 100 -17 -5.05116 | opp_overlap 1999458 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG TERM 2736 1999458 - 1999488 + r 100 -19.2 -3.86897 | opp_overlap 1999458 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG ydiH 1999983 - 1999714 - | hypothetical protein TERM 2737 1999959 - 1999924 - G 74 -9.8 -3.48276 | overlap 1999926 1999927 CTCGCTTTTAGACAA GACCTGCACAGTATAC CACC GTTTACTGTGCAGATA ATAACCAAAAGCAAT TERM 2738 1999957 - 1999926 - G 83 -12.4 -3.31726 | overlap 1999924 1999927 CGCTTTTAGACAAGA CCTGCACAGTATAC CACC GTTTACTGTGCAGA TAATAACCAAAAGCA TERM 2739 1999956 - 1999927 - G 84 -13.7 -2.58822 | overlap 1999926 1999924 GCTTTTAGACAAGAC CTGCACAGTATAC CACC GTTTACTGTGCAG ATAATAACCAAAAGC ydiI 2000412 - 2000002 - | putative esterase ydiJ 2003465 - 2000409 - | putative conserved FAD-linked oxidoreductase TERM 2740 2003067 - 2003046 - G 76 -3.7 -5.00616 | opp_overlap 2003060 CTCCGGCGCAAAAAA GTAGCCGAA CGGT TTCAGGTAC TGATTGAGTTGGTCT ydiK 2003854 - 2004966 + | conserved hypothetical protein; putative inner membrane protein TERM 2741 2004974 - 2004994 + F 100 -16.9 -3.62775 | opp_overlap 2004967 2004968 ATAAGTAATTTCTCA TCAGGCGGC TCT GCCGCCTGA TTGTTAACCCCTGCT TERM 2742 2005230 - 2005249 + F 100 -9.3 -5.82388 | CTGTGTGTAGTCTTT GCCCATC TCCCAC GATGGGC TTTTTTTTAACATTT ydiL 2005395 - 2005751 + | hypothetical protein TERM 2743 2006966 - 2006977 + G 70 -3.6 -4.72986 | TTCGATACCGCCATC GCTG CCAT CGGC TTTTTACTGGCACTG ydiM 2005850 - 2007064 + | putative transporter; MFS superfamily ydiN 2007291 - 2008556 + | putative transporter TERM 2744 2009031 - 2009019 - g 70 -3.5 -4.66535 | opp_overlap 2009007 AAGGTTTAAAAGAAA TTAAA CTC TTTAA CCGTCGGGATGAGTT ydiB 2008568 - 2009434 + | quinate/shikimate 5-dehydrogenase, NAD(P)-binding aroD 2009465 - 2010223 + | 3-dehydroquinate dehydratase TERM 2745 2010264 - 2010231 - f 81 -9.6 -3.86312 | overlap 2010234 AGGCATAAGCAATAA TATTTCGGCGGGAA CATCCT CCCCCGCCGAACTA AAAAAATATATTTAA TERM 2746 2010261 - 2010234 - f 77 -11.3 -2.70018 | overlap 2010231 CATAAGCAATAATAT TTCGGCGGGAA CATCCT CCCCCGCCGAA CTAAAAAAATATATT TERM 2747 2011747 - 2011734 - g 81 -6.7 -4.62069 | opp_overlap 2011740, overlap 2011736 CTTTCAGCGGAAAAA TCGCT CTCG AGCGA GGGCTGGATGTTCGT ydiF 2010368 - 2011963 + | short chain acyl-CoA transferase: fused alpha subunit ; beta subunit TERM 2748 2012093 - 2012081 - g 70 -6.2 -4.2558 | overlap 2012090 CACCTGCGATCAAAA CGGG ACATA CCCG CGTGAATTTATGCGG ydiO 2011977 - 2013128 + | putative acyl-CoA dehydrogenase TERM 2749 2013132 - 2013169 + T 91 -11.2 -3.85698 | opp_overlap 2013130 2013126, overlap 2013130 2013133 CAGAACAAATAATCT GCAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAGA TTTATCCAACAAGAC TERM 2750 2013133 - 2013168 + T 89 -14.7 -2.91276 | opp_overlap 2013130 2013126, overlap 2013130 2013132 AGAACAAATAATCTG CAGGCGGCGCAGCTT CTTAAC AAACTGCGCCGCCAG ATTTATCCAACAAGA ydiP 2014082 - 2013171 - | putative DNA-binding transcriptional regulator TERM 2751 2014056 - 2014044 - G 78 -9.1 -3.86897 | opp_overlap 2014042 TTTACCGGCGACAAA CAGCG TTT CGCTG GCGTTATCAAAACAG TERM 2752 2014147 - 2014115 - R 81 -6.3 -4.90869 | opp_overlap 2014122 2014146, overlap 2014123 ATGAGCAAGCAAAAA CAATATATGCCGGAT AAA ATACGGCGTGTATTG CGGTTATACAACCGC ECUMN_1986 2014361 - 2014185 - | hypothetical protein TERM 2753 2015000 - 2014989 - g 71 -2.2 -5.00616 | GGCGCGGGTAAAAAA CCGA TAAA TCAG TGGCAGGCAAGTGAC ydiQ 2014398 - 2015162 + | putative electron transfer flavoprotein subunit (etfB-like) TERM 2754 2015610 - 2015589 - g 70 -5.1 -4.34402 | GTTCGCACAGGAAAA GATCAACAG CCCG CTGGCGATC ATTACCCTTGCACCC ydiR 2015182 - 2016120 + | putative electron transfer flavoprotein subunit, FAD-binding TERM 2755 2017279 - 2017301 + G 71 -9.1 -3.47361 | overlap 2017277 TTTCCGCAAGATCCC GGCGCTGAT GGAAA ATCCGCGCC TGTTTAGTCAGTATC ydiS 2016176 - 2017465 + | putative oxidoreductase subunit with FAD/NAD(P)-binding domain ydiT 2017462 - 2017755 + | putative 4Fe-4S ferredoxin-type oxidoreductase subunit TERM 2756 2017766 - 2017791 + G 81 -11.2 -3.58905 | gap 1, overlap 2017768 GCTAATCATGCATCC CA-CAGGCCCG CATCT CGGGCCTGATG TTCTGTCTCGAGAGT TERM 2757 2017768 - 2017788 + G 84 -14 -2.61997 | overlap 2017766 TAATCATGCATCCCA CAGGCCCG CATCT CGGGCCTG ATGTTCTGTCTCGAG TERM 2758 2018124 - 2018104 - g 70 -6.7 -4.07568 | opp_overlap 2018093 2018104 2018102, overlap 2018105 TTGCCTGCCTGAAAA TCGGTGCGG TTT CCGTACCGC TGTTGCCTTCCTGGC TERM 2759 2018657 - 2018669 + G 91 -10.5 -4.16904 | TTGCACCTGTATGCT CGGCG CAA CGCCG TTTGTCTATGATCTT ydiD 2017758 - 2019458 + | short chain acyl-CoA synthetase, anaerobic TERM 2760 2019480 - 2019512 + T 74 -3.5 -5.10665 | gap 2, opp_overlap 2019484 2019497, overlap 2019482 2019483 2019484 TCTTCGGGGATCACA TAAA--CCCGGCGAC TGAAC GCCGCCGGGGATTTA TTTTATTTCTTCAGT TERM 2761 2019482 - 2019508 + T 77 -4.9 -5.02645 | opp_overlap 2019484 2019497, overlap 2019480 2019483 2019484 TTCGGGGATCACATA AACCCGGCGAC TGAAC GCCGCCGGGGA TTTATTTTATTTCTT TERM 2762 2019483 - 2019507 + T 72 -8.4 -3.57927 | opp_overlap 2019484 2019497, overlap 2019482 2019480 2019484 TCGGGGATCACATAA ACCCGGCGAC TGAAC GCCGCCGGGG ATTTATTTTATTTCT TERM 2763 2019484 - 2019506 + T 79 -11.9 -2.72316 | opp_overlap 2019484 2019497, overlap 2019483 2019482 2019480 CGGGGATCACATAAA CCCGGCGAC TGAAC GCCGCCGGG GATTTATTTTATTTC TERM 2764 2019506 - 2019484 - T 100 -14.1 -4.08706 | opp_overlap 2019484 2019483 2019482 2019480, overlap 2019497 CGGGGATCACATAAA CCCGGCGAC TGAAC GCCGCCGGG GATTTATTTTATTTC pps 2021893 - 2019515 - | phosphoenolpyruvate synthase TERM 2765 2020205 - 2020187 - G 78 -8 -4.36914 | opp_overlap 2020186, overlap 2020171 2020168 GCGCTTCGGATAAAA CGCGGCAC CCA GCGTCGCG ATCCCTTCAGTCAGA ECUMN_1993 2022114 - 2021947 - | hypothetical protein ydiA 2022226 - 2023059 + | hypothetical protein TERM 2766 2023047 - 2023076 + F 75 -4.3 -4.98468 | opp_overlap 2023056, overlap 2023048 CATGGGCCTTAGCCG CCGAATGTACTAG AGAA CTAGTGCATTAGC TTATTTTTTTGTTAT TERM 2767 2023870 - 2023857 - g 86 -6.7 -5.00895 | opp_overlap 2023857, overlap 2023859 CTCACCAGACAAAAA TGGTC AGAT GACCA TCTATCAGACCAGCG aroH 2023216 - 2024262 + | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible TERM 2768 2024268 - 2024291 + F 100 -15.4 -3.86822 | opp_overlap 2024286 CCGCTTCTGAATGCG TGCCCATTCC TGAC GGAATGGGCA TTTCTGCGCAACTTG ydiE 2024394 - 2024585 + | conserved hypothetical protein; putative hemin uptake protein ydiU 2026025 - 2024589 - | hypothetical protein ydiV 2026801 - 2026088 - | hypothetical protein TERM 2769 2027009 - 2027035 + r 100 -21 -4.60487 | opp_overlap 2027009 GTATTCTGGAGTAAA TGGACGGCGATG TAT CATCGCCGTCCA TTTTTCGACATACTA TERM 2770 2027035 - 2027009 - R 100 -21 -3.73224 | opp_overlap 2027009 GTATTCTGGAGTAAA TGGACGGCGATG TAT CATCGCCGTCCA TTTTTCGACATACTA nlpC 2027512 - 2027048 - | putative peptidase lipoprotein btuD 2028339 - 2027590 - | vitamin B12 transporter subunit : ATP-binding component of ABC superfamily btuE 2028890 - 2028339 - | putative glutathione peroxidase btuC 2029933 - 2028953 - | vitamin B12 transporter subunit: membrane component of ABC superfamily TERM 2771 2030002 - 2030016 + r 100 -12.8 -4.88407 | opp_overlap 2030002 AGTGAAAAGAAAAAA GGCCGC AGA GCGGCC TTTTTAGTTAGATCA TERM 2772 2030016 - 2030002 - R 100 -12.8 -5.80951 | opp_overlap 2030002 AGTGAAAAGAAAAAA GGCCGC AGA GCGGCC TTTTTAGTTAGATCA ihfA 2030333 - 2030034 - | integration host factor (IHF), DNA-binding protein, alpha subunit pheT 2032725 - 2030338 - | phenylalanine tRNA synthetase, beta subunit pheS 2033723 - 2032740 - | phenylalanine tRNA synthetase, alpha subunit TERM 2773 2033550 - 2033567 + g 76 -9.1 -3.78934 | gap 1, opp_overlap 2033549 2033550 CGCTTCGTTGATAAC CGCACCGG CTG CCGG-GCG TTCTTCTGGCGGCAG TERM 2774 2033606 - 2033618 + g 71 -2.6 -5.0133 | GGGTCGTCATCTGAA GGGT TAAGT GCCC TTTTTTACCCAAATA TERM 2775 2033797 - 2033812 + r 77 -10.4 -3.55815 | opp_overlap 2033797 GCGCATACAAAAAAA GCCTCC ACTG GGAGGC TTTCAGGCGCTGTTT TERM 2776 2033812 - 2033797 - R 100 -10.4 -5.71712 | opp_overlap 2033797 GCGCATACAAAAAAA GCCTCC ACTG GGAGGC TTTCAGGCGCTGTTT pheM 2033906 - 2033862 - | phenylalanyl-tRNA synthetase operon leader peptide TERM 2777 2033999 - 2034017 + r 78 -10.3 -3.62418 | opp_overlap 2033999 GCGTTGAAACGAAAA GAGGGAG ACTAG CTCCCTC TTTCAACTGGCTTAT TERM 2778 2034017 - 2033999 - R 89 -10.3 -4.54727 | opp_overlap 2033999 GCGTTGAAACGAAAA GAGGGAG ACTAG CTCCCTC TTTCAACTGGCTTAT rplT 2034385 - 2034029 - | 50S ribosomal subunit protein L20 rpmI 2034635 - 2034438 - | 50S ribosomal subunit protein L35 TERM 2779 2034723 - 2034677 - R 74 -5.9 -4.66537 | gap 1, opp_overlap 2034682, overlap 2034673 2034686 AATAAACGAAACAAA GGCGAACAATGCCTGTGAAGCC CAAA GGCTCCACAGACAGTGCT-ACT TGAAGGCCTTACTGT TERM 2780 2034715 - 2034686 - R 100 -15.1 -3.72593 | opp_overlap 2034682, overlap 2034673 2034677 AACAAAGGCGAACAA TGCCTGTGAAGCC CAAA GGCTCCACAGACA GTGCTACTTGAAGGC thrS 2037206 - 2035278 - | threonyl-tRNA synthetase TERM 2781 2036277 - 2036287 + g 71 -2.4 -5.00616 | ATCTTTGTAGTTGTC CCAG TGA CCGG TTTTTTCCCACAGAA TERM 2782 2036478 - 2036492 + g 73 -9.2 -3.61715 | ACCGATTTTACGGTG GTCGCG TTT CGCGGC TTCTTCCAGGCGCTG TERM 2783 2036515 - 2036525 + g 90 -4.6 -5.36441 | AGGCGCTGCAGGTAA GCGT TAA GCGC TTTTTTGTCTGCCCA TERM 2784 2038036 - 2038026 - g 86 -4 -5.34555 | opp_overlap 2038026 TTACACTATAAAAAA GAAA TCA TTTC CTTATTACTGGAAAC TERM 2785 2038834 - 2038822 - g 73 -9.1 -3.62522 | CAATGTTGTTAATAA TGGCC ACA GGCCA GACTCAACAGCTTAT ECUMN_2010 2037729 - 2039627 + | putative ankyrin repeat regulatory protein TERM 2786 2039947 - 2039919 - T 80 -10.9 -3.38317 | opp_overlap 2039918, overlap 2039917 2039921 AGTGACAAACGAAGA CAGCCAGACCGCA TAA CACGGTCCGGCAG ATAATTTTACATGCT TERM 2787 2039945 - 2039921 - T 83 -12.1 -3.25317 | opp_overlap 2039918, overlap 2039919 2039917 TGACAAACGAAGACA GCCAGACCGCA TAA CACGGTCCGGC AGATAATTTTACATG ydiY 2040712 - 2039954 - | hypothetical protein TERM 2788 2040192 - 2040204 + g 73 -9.1 -3.67141 | opp_overlap 2040192 GCCCCGGAGGCATAA CCCAG CGG CTGGG TTTCACTGGCATTAT TERM 2789 2040579 - 2040589 + g 83 -5.4 -5.03314 | opp_overlap 2040579 CCTGCGTTCAGATTA CCTT CGA AAGG TTTTTTAGCGCTGGC TERM 2790 2040756 - 2040740 - H 100 -5.8 -5.88565 | CGTACAACAAAAAAA GAGACC TTCGC GGTCCC GGAAACTTTCTTAAG pfkB 2040999 - 2041928 + | 6-phosphofructokinase II TERM 2791 2041956 - 2041937 - f 73 -9.3 -3.46068 | overlap 2041935 CCGCTAACTGAAACA TTCCCCC TGCATT GGGGGAA TCACCACCAACCTGT ydiZ 2042029 - 2042319 + | hypothetical protein TERM 2792 2042721 - 2042733 + G 90 -9.1 -4.48713 | ACCTCGCCCGCTGGA TGCGC ATA GCGCA TTTATTCTTGGTCAG yniA 2042425 - 2043285 + | putative phosphotransferase/kinase TERM 2793 2043303 - 2043319 + T 90 -10.8 -4.43477 | opp_overlap 2043302 2043303 CGGGTTGAGGATAAT GGCCGC TCCGT GCGGCC TTTTGATTAAATAAA TERM 2794 2043319 - 2043303 - T 74 -10.8 -2.64099 | opp_overlap 2043303, overlap 2043302 CGGGTTGAGGATAAT GGCCGC TCCGT GCGGCC TTTTGATTAAATAAA yniB 2043862 - 2043326 - | conserved hypothetical protein; putative inner membrane protein TERM 2795 2043600 - 2043580 - G 81 -6.1 -4.84359 | overlap 2043583 CCAGTCCGACAAAAA TCAGGATGA AAA TCACCCAGA ACATAACGTTCACGC TERM 2796 2043677 - 2043666 - G 90 -7.2 -5.15381 | AACAGATTCAAAAAA GGCG TATT CGCC TGCATCATATCGATC yniC 2044009 - 2044677 + | putative phosphoglycolate phosphatase TERM 2797 2044681 - 2044708 + F 100 -19.2 -4.16301 | opp_overlap 2044681 CTTCTCGGTTAATGA CCAGGGGCAGTG ATCA CGCTGCCCCTGG TTCTTTATCTGAATT TERM 2798 2044708 - 2044681 - f 100 -17 -2.70932 | opp_overlap 2044681 CTTCTCGGTTAATGA CCAGGGGCAGTG ATCA CGCTGCCCCTGG TTCTTTATCTGAATT TERM 2799 2044848 - 2044863 + G 73 -4 -4.74767 | gap 1, overlap 2044849 TTTTATCATGACGGC G-GAAGG TCA CCTTCTC TTTTCTATTGCTTGT TERM 2800 2044849 - 2044861 + G 72 -7.7 -3.97283 | overlap 2044848 TTTATCATGACGGCG GAAGG TCA CCTTC TCTTTTCTATTGCTT ydjM 2044840 - 2045430 + | conserved hypothetical protein; putative inner membrane protein regulated by LexA TERM 2801 2046122 - 2046136 + G 70 -3.6 -4.59853 | overlap 2046130 CCAATCCGACGTCAA TTATCA GCG TGGTAA TTTTTGCCGCATTCC ydjN 2045563 - 2046954 + | putative cation-acid symporter ydjO 2047773 - 2046958 - | hypothetical protein TERM 2802 2047380 - 2047394 + g 87 -5 -5.31275 | ACCTGTTTTTTATAT TGATCA AAT TGGTCA TTTTTTCTGGTCGGA TERM 2803 2048015 - 2048043 + r 75 -11 -2.87769 | opp_overlap 2048020, overlap 2048010 CAGAATTTCAGGCCA TGTAACTCCCGG CAAAA CCGGGAGGTACG TAATCTTTACTCAGT TERM 2804 2048038 - 2048020 - R 83 -12.4 -3.06796 | opp_overlap 2048015 2048010 TTTCAGGCCATGTAA CTCCCGGC AAA ACCGGGAG GTACGTAATCTTTAC cedA 2048313 - 2048050 - | cell division modulator katE 2048496 - 2050757 + | hydroperoxidase HPII(III) (catalase) TERM 2805 2050799 - 2050759 - T 75 -9.8 -3.5394 | gap 1, opp_overlap 2050759 2050760, overlap 2050761 2050768 AAATTCCGGCGTAAA TATGGATAAGGTCACGCCC CCTG GGGAGTGACCTTA-CCACC TTACTTACACATCAA TERM 2806 2050760 - 2050798 + T 74 -11.1 -2.60723 | gap 1, opp_overlap 2050759 2050761 2050768, overlap 2050759 AATTCCGGCGTAAAT ATGGATAAGGTCACGCCC CCTG GGGAGTGACCTTA-CCAC CTTACTTACACATCA TERM 2807 2050797 - 2050761 - T 100 -14.6 -3.34517 | gap 1, opp_overlap 2050760 2050759, overlap 2050759 2050768 ATTCCGGCGTAAATA TGGATAAGGTCACGCCC CCTG GGGAGTGACCTTA-CCA CCTTACTTACACATC TERM 2808 2050791 - 2050768 - T 93 -12.4 -3.452 | opp_overlap 2050760 2050759, overlap 2050761 2050759 CGTAAATATGGATAA GGTCACGCCC CCTG GGGAGTGACC TTACCACCTTACTTA chbG 2051553 - 2050804 - | hypothetical protein chbF 2052918 - 2051566 - | cryptic phospho-beta-glucosidase, NAD(P)-binding chbR 2053865 - 2053023 - | DNA-binding transcriptional dual regulator TERM 2809 2053756 - 2053768 + g 71 -3.4 -4.79352 | TGCTGATGCAGTCCG CTGA TACTC TCAG TTTTGTTATAGATAA chbA 2054223 - 2053873 - | N,N'-diacetylchitobiose-specific enzyme IIA component of PTS chbC 2055632 - 2054274 - | N,N'-diacetylchitobiose-specific enzyme IIC component of PTS TERM 2810 2055671 - 2055652 - R 85 -7.9 -4.62904 | opp_overlap 2055652 2055650 2055646 AAATACCCTTAAAAA CCGCAAT TTAAAT ATTGCGG TATTGATTTATGAAA chbB 2056037 - 2055717 - | N,N'-diacetylchitobiose-specific enzyme IIB component of PTS TERM 2811 2056301 - 2056286 - R 100 -7.5 -5.78622 | opp_overlap 2056286 TCAGGCCAAAAAAAA CCGGC GCAATG GCCGG TTTCCGTTGTAACTC osmE 2056674 - 2056336 - | DNA-binding transcriptional activator TERM 2812 2056914 - 2056902 - g 72 -4.7 -4.69324 | overlap 2056903 ACAACAAATAATAAA GGCGC TGG GCGCA AAACCGCAGATTAAT nadE 2056876 - 2057703 + | NAD synthetase, NH3/glutamine-dependent TERM 2813 2057740 - 2057769 + F 72 -8.5 -3.63515 | opp_overlap 2057737 2057734, overlap 2057741 TGCGAAAAAGAGTAC TTTGTTCACGCCG GATG CGGCGTGAACGCC TTATTCGACCTACAA TERM 2814 2057741 - 2057768 + F 79 -12 -2.77895 | opp_overlap 2057737 2057734, overlap 2057740 GCGAAAAAGAGTACT TTGTTCACGCCG GATG CGGCGTGAACGC CTTATTCGACCTACA TERM 2815 2058273 - 2058257 - g 70 -6.5 -4.15044 | CCGCTGTTTAATAAA CGGTTGC GCC GCAATCG CCAGCTCTGTGCCCT ydjQ 2057933 - 2058820 + | endonuclease of nucleotide excision repair ydjR 2059355 - 2058780 - | hypothetical protein TERM 2816 2059482 - 2059536 + r 88 -12.1 -3.52779 | opp_overlap 2059484, overlap 2059484 GAGAAGAGAAAAGAA AACCGCCGATCCTGTCCACCGCATT ACTGC AAGGTAGTGGACAAGACCGGCGGTC TTAAGTTTTTTGGCT TERM 2817 2059484 - 2059534 + r 100 -14.7 -3.3244 | opp_overlap 2059484, overlap 2059482 GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATT ACTGC AAGGTAGTGGACAAGACCGGCGG TCTTAAGTTTTTTGG TERM 2818 2059534 - 2059484 - R 100 -19.8 -5.26907 | opp_overlap 2059482 2059484 GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATTA CTG CAAGGTAGTGGACAAGACCGGCGG TCTTAAGTTTTTTGG spy 2060043 - 2059558 - | envelope stress induced periplasmic protein TERM 2819 2060331 - 2060380 + r 74 -3.5 -5.03145 | opp_overlap 2060334 2060343, overlap 2060334 2060340 2060341 2060342 GTATTAATTTATAAG AAAGCAACTTAATACCCGCAGAA TGAT TTCTGCGGGTAAGTATTAGCTTA TTTTTTCGAGCATTA TERM 2820 2060334 - 2060377 + r 73 -5.2 -4.61482 | opp_overlap 2060334 2060343, overlap 2060331 2060340 2060341 2060342 TTAATTTATAAGAAA GCAACTTAATACCCGCAGAA TGAT TTCTGCGGGTAAGTATTAGC TTATTTTTTCGAGCA TERM 2821 2060340 - 2060372 + r 71 -8.6 -3.43246 | gap 1, opp_overlap 2060334 2060343, overlap 2060334 2060331 2060341 2060342 TATAAGAAAGCAACT TA-ATACCCGCAGAA TGAT TTCTGCGGGTAAGTA TTAGCTTATTTTTTC TERM 2822 2060341 - 2060370 + r 70 -9.3 -3.25449 | opp_overlap 2060334 2060343, overlap 2060340 2060334 2060331 2060342 ATAAGAAAGCAACTT AATACCCGCAGAA TGAT TTCTGCGGGTAAG TATTAGCTTATTTTT TERM 2823 2060342 - 2060369 + r 81 -12.8 -2.53642 | opp_overlap 2060334 2060343, overlap 2060341 2060340 2060334 2060331 TAAGAAAGCAACTTA ATACCCGCAGAA TGAT TTCTGCGGGTAA GTATTAGCTTATTTT TERM 2824 2060368 - 2060343 - R 100 -16.3 -3.2827 | opp_overlap 2060342 2060341 2060340 2060334 2060331, overlap 2060334 AAGAAAGCAACTTAA TACCCGCAGAA TGAT TTCTGCGGGTA AGTATTAGCTTATTT astE 2061341 - 2060373 - | succinylglutamate desuccinylase TERM 2825 2061289 - 2061302 + g 81 -4.5 -5.055 | opp_overlap 2061300, overlap 2061290 CCGTTGATTTCTCGC TCGGT GATA ACCGG TTTTTTACCCGTTAA astB 2062677 - 2061334 - | succinylarginine dihydrolase TERM 2826 2061945 - 2061964 + g 72 -7 -4.25104 | opp_overlap 2061942 2061944 CATTATGAAAAACGC CCTGGTCG ATAA CGTCCGGG TTTTGCTGGGCGAAA TERM 2827 2062239 - 2062224 - G 70 -4.7 -4.56597 | opp_overlap 2062211 CTTCGTCGTTAAAAA TCGCT TTTAAC AGCGA TTCAGTGACGGGGGC astD 2064152 - 2062674 - | succinylglutamic semialdehyde dehydrogenase TERM 2828 2063759 - 2063733 - G 100 -14.4 -3.56821 | opp_overlap 2063758 ATTATACGGCCCAAA CACCGCCAGCAC GCC GTGCGGGCGATG TCGCAGGCTCGCCGC TERM 2829 2064001 - 2063989 - G 72 -10.5 -3.05769 | TCGCCAAAGGAGAGA CGCGC CCA GCGCG GAAACGCCGCACGGG astA 2065183 - 2064149 - | arginine succinyltransferase TERM 2830 2064283 - 2064246 - G 70 -6.1 -4.19735 | gap 1, opp_overlap 2064275 GCGGTTAAAATCAAA CGCTCGGTTGCCGGATCG GTA CGCACCAGCA-CCACGCG GAAATGGTGATAATT TERM 2831 2064827 - 2064809 - G 79 -10.2 -3.85698 | opp_overlap 2064801 CTCCGGGTCGAGAAA CAGCGTGC ACA GCTCGCTG CTGCCGGTGTGATCG astC 2066400 - 2065180 - | succinylornithine transaminase, PLP-dependent TERM 2832 2067069 - 2067081 + G 70 -6.9 -4.12188 | opp_overlap 2067058 2067056 AAGAGACGCCGATTG CCGTG CGT CGCGG TTTTCCGGGTGATGA xthA 2066846 - 2067652 + | exonuclease III ydjX 2067819 - 2068529 + | conserved hypothetical protein; putative inner membrane protein TERM 2833 2069055 - 2069045 - g 71 -2.4 -4.92791 | CAGAAGAGAAGAAAA CGGG CTG CCTG GTGTGTCTGGATAGC ydjY 2068534 - 2069211 + | hypothetical protein TERM 2834 2069547 - 2069564 + G 88 -5.5 -5.24129 | gap 1, overlap 2069546 2069549 TGGACCAGTTCGATG GC-CGGCG CGG CGCTGTGC TTTTTTATCGCCAGA ydjZ 2069226 - 2069933 + | conserved hypothetical protein; putative inner membrane protein ynjA 2069933 - 2070481 + | hypothetical protein TERM 2835 2070617 - 2070574 - g 74 -3.1 -5.01811 | gap 2, overlap 2070577 GCAGGAAATCAAAAA CGACGCCAAAGG-GC-AAACC GTCT GGTTTAACGCCTGGGGCGGCG ATACGGCAATTAACC TERM 2836 2070850 - 2070897 + G 72 -4.9 -4.67353 | gap 2, opp_overlap 2070835 2070834 GGGCTGGGTGGAGAC TCTGCCC-AACTGGC-GCTATGT CGAC ACACAGCTGCCGGTGCGGGAAGA TTTTTCAGTGCCTAC TERM 2837 2071166 - 2071130 - g 70 -5.8 -4.28045 | gap 2, opp_overlap 2071136 ACAGCATTAAAAGAA GCGCCG-GACG-ATGCGA CTT TCGCCCGCGTCACTGCGC CCTTGTGGCAATATC TERM 2838 2071329 - 2071317 - g 95 -9.1 -5.14965 | opp_overlap 2071317 ATGCGCAGCAAAAAA TCGCC AGT GGCGA TTTGCCGGCAAGCAG TERM 2839 2071317 - 2071329 + G 71 -9.1 -3.53012 | opp_overlap 2071317 ATGCGCAGCAAAAAA TCGCC AGT GGCGA TTTGCCGGCAAGCAG TERM 2840 2071540 - 2071526 - g 81 -7.1 -4.59773 | CTCGATCCGCAAAAA CTGCC TGACG GGCAG CGCGAAACATTGCAA ynjB 2070491 - 2071657 + | hypothetical protein TERM 2841 2072352 - 2072341 - gf 74 -7.2 -4.22748 | GATCAACAAACGAAA GGCG CACT CGCC AGCCTGCTGCTGATG ynjC 2071675 - 2073165 + | fused putative transporter subunits of ABC superfamily: membrane components TERM 2842 2073474 - 2073456 - gf 71 -10.2 -2.74605 | overlap 2073453 2073452 GTCGGGCAAAATTTA CTGCTGGC TCT GCCAGCGG CACTCAAAGGTGTTG ynjD 2073078 - 2073815 + | putative sulfate/thiosulfate transporter subunit: ATP-binding component of ABC superfamily transporter TERM 2843 2074319 - 2074299 - g 70 -4.5 -4.56597 | opp_overlap 2074301, overlap 2074301 TCCCGTCTGCAAAAA CTGCCGCAC TTT GAGCAGCTG GTTTATCCGCAATGG TERM 2844 2074551 - 2074536 - g 70 -6.8 -4.08767 | opp_overlap 2074547 2074550 GCGATGCTGGCAAAA CACGGC ATTC GCCATG ACACCACGGTCATTC TERM 2845 2075165 - 2075150 - g 81 -4.6 -5.09895 | overlap 2075151 CAGCGATCCAAAAAA TCCGGT AGCA ACCGGT GAACGCGGCCCGGAC ynjE 2073885 - 2075192 + | putative exported thiosulfate sulfur transferase / thiosulfate binding protein TERM 2846 2075230 - 2075204 - T 93 -15.2 -2.75803 | ATAACATTGCAATTA CTGACGCTGGAG CGA CTTCAGCGTCAG ATACCCACTCCACAC ynjF 2075821 - 2075201 - | putative phosphatidyl transferase, inner membrane protein TERM 2847 2075667 - 2075650 - G 75 -5.5 -4.63218 | GCCTGTTCAACAAAA TGACGAC AAGC GCCGCCA GATACCAGCCCAGCG nudG 2075908 - 2076315 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase TERM 2848 2076429 - 2076406 - f 100 -12.4 -3.87815 | overlap 2076422 TTTGATCCTGATAAA CGCAGCACTG AGTA CAGGGCTGCG CTGACTGCCCGCCTG TERM 2849 2076864 - 2076836 - g 70 -6.7 -4.12902 | gap 1 CAACCATGTCCAAAA GCGCG-ACCCGA ATCAAA CCGAGTTCGCGC AAGCCGTTCGTGAAG gdhA 2076789 - 2078132 + | glutamate dehydrogenase, NADP-specific TERM 2850 2078173 - 2078139 - T 77 -11.5 -2.81072 | gap 1, overlap 2078133 2078138 GTGATTTAAGACAAT TGTGCCGGATACAGCG CAAA CGCCTTATCCGGC-CA TAAAAATCTTCAGTA TERM 2851 2078227 - 2078249 + T 100 -11.3 -5.41143 | gap 1 TATTATCACTCCATT GCCCGCC-TC TTCT GATGGCGGGC TTTTTTTCGGCGCTC topB 2080221 - 2078209 - | DNA topoisomerase III TERM 2852 2079741 - 2079790 + gT 78 -8.5 -4.13945 | gap 1, opp_overlap 2079720 2079774, overlap 2079742 CGATCGCCCGCTCAA CCGCCTGCGGGTTCAG-GTCGTTT ATC AAGCAACGCTGCACCTGCTGGCGC TTTTCCGGTGCCAGT TERM 2853 2079742 - 2079789 + gT 81 -12 -3.08046 | gap 1, opp_overlap 2079720 2079774, overlap 2079741 GATCGCCCGCTCAAC CGCCTGCGGGTTCAG-GTCGTTT ATC AAGCAACGCTGCACCTGCTGGCG CTTTTCCGGTGCCAG selD 2081212 - 2080169 - | selenophosphate synthase ECUMN_2052 2081303 - 2081154 - | hypothetical protein ydjA 2081880 - 2081329 - | putative oxidoreductase TERM 2854 2082051 - 2082070 + G 77 -2.8 -5.08824 | overlap 2082053 AATACATGCGAACCC TTTGGCGA TTTA TTGCCGGA TTTTTTAAATGGACG ECUMN_2054 2081934 - 2082098 + | hypothetical protein TERM 2855 2083229 - 2083194 - gf 79 -11.8 -2.52464 | opp_overlap 2083185 CCGCGTCCGAAGTGA TTCGCGCTGAACTGGC TGCC GCCAGATCAGCGGGTA AACCTGTGGTTGTGT sppA 2082041 - 2083897 + | protease IV (signal peptide peptidase) TERM 2856 2083909 - 2083933 + F 100 -11.4 -5.81412 | opp_overlap 2083910, overlap 2083910 TTAAGTCTTGTACTA AGTGGCCGAC AGATC GTCGGCCACA TTTTTTTTACCTCGA TERM 2857 2083932 - 2083910 - f 100 -15.6 -3.14881 | opp_overlap 2083910 2083909 TAAGTCTTGTACTAA GTGGCCGACA GAT CGTCGGCCAC ATTTTTTTTACCTCG TERM 2858 2083910 - 2083932 + F 100 -14.9 -4.07763 | opp_overlap 2083910, overlap 2083909 TAAGTCTTGTACTAA GTGGCCGAC AGATC GTCGGCCAC ATTTTTTTTACCTCG TERM 2859 2084842 - 2084816 - g 73 -3.7 -4.77173 | overlap 2084818 GCGCCACAAAACAAA GCCTTCCTGCA GGAAT TACAAGAAGCC AGCGATCGCGGTATT ansA 2084063 - 2085079 + | cytoplasmic L-asparaginase I pncA 2085090 - 2085731 + | nicotinamidase/pyrazinamidase TERM 2860 2085779 - 2085732 - T 72 -9.6 -3.22774 | gap 1 GAGACGCAGGAGTAA TTTTATGCTGGCCTACAAT TCTGTACTGCC ATTGTAGGCCAG-ATAAAA CACGTCAGTGGTACA ydjE 2087182 - 2085824 - | putative transporter; MFS superfamily TERM 2861 2086693 - 2086671 - G 100 -4.8 -5.63103 | CGCCAACTAAAAAAA GCGATAACCA CCA CGCCTATCGC CGCAGACAACATGGG TERM 2862 2086885 - 2086869 - G 74 -6.5 -4.44245 | overlap 2086860 2086857 ATATCAGGGACAAAA GCGGC CCCTGTT GCCGC AATACCGACGATGAG TERM 2863 2086959 - 2086938 - G 72 -7.3 -4.17048 | CGCCGCCCAAAATAA TCACCGATG AACC CACCGGTAA GAGAGCCGATGAAAT TERM 2864 2087093 - 2087079 - G 82 -2.8 -5.2166 | overlap 2087080 GAATAACTCAAAAAA CCCGTT AAT AACAGA CTAAAGCTTATAATA TERM 2865 2087216 - 2087237 + r 78 -10.2 -3.60538 | opp_overlap 2087215 2087216, overlap 2087214 TAAAAAGGTAGCAAT TGCGGCAA ATTCAC TTGCCGCA TCTTTATCATCATTT TERM 2866 2087237 - 2087216 - R 74 -10.9 -2.57261 | opp_overlap 2087216 2087214, overlap 2087215 TAAAAAGGTAGCAAT TGCGGCAAA TTCA CTTGCCGCA TCTTTATCATCATTT ydjF 2088058 - 2087300 - | putative DNA-binding transcriptional regulator ydjG 2089175 - 2088195 - | putative oxidoreductase; similar to aldo/keto reductase TERM 2867 2088767 - 2088750 - G 74 -3.3 -5.0133 | GATCGGCGTAAAAAA TGGCGGC ACCG ACTGCCA GTGCGTCATGTAGAT TERM 2868 2088824 - 2088852 + g 78 -5.2 -4.84359 | GCAAGCTGGCTTCTA CCTCTTCGCGGA TAGAT TCCGGGGAAAGG TTTTTATACAACTGC TERM 2869 2088939 - 2088953 + g 86 -4.2 -5.41143 | GGTTTCTACTACAAC CTGTTC ACG GGGCAG TTTTTTTAACGCCTG ydjH 2090132 - 2089185 - | putative sugar kinase ydjI 2090973 - 2090137 - | putative aldolase ydjJ 2092037 - 2090994 - | putative iditol dehydrogenase ydjK 2093433 - 2092054 - | putative transporter; MFS superfamily TERM 2870 2092740 - 2092752 + g 78 -9.1 -3.9093 | AAGGTTTTCCCGTCT GGCGT ATG ACGCC TTCTTCTATACTCCG TERM 2871 2093405 - 2093415 + g 71 -2.4 -4.90002 | CGATCCAGCCGTGCA CCAC AAT GCGG TTTTGTTATCTGTTC ydjL 2094536 - 2093460 - | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 2872 2094417 - 2094434 + g 77 -8.3 -4.08485 | GTGCTTCATGTCTGC GCCGCAG ATTG CCGCGGC TTTAATTTCAATCAC TERM 2873 2094648 - 2094613 - R 79 -9.2 -3.93038 | opp_overlap 2094622, overlap 2094614 2094622 2094631 GAGGTCAACATTAAA TCTGTAAAACACAGAT AATG ATCTGCGTTTTACAAC TCAGATCACAATTAC TERM 2874 2094647 - 2094614 - R 82 -12.7 -2.95341 | opp_overlap 2094622, overlap 2094613 2094622 2094631 AGGTCAACATTAAAT CTGTAAAACACAGAT AATG ATCTGCGTTTTACAA CTCAGATCACAATTA TERM 2875 2094639 - 2094622 - R 70 -6.3 -4.17491 | opp_overlap 2094622, overlap 2094614 2094613 2094631 ATTAAATCTGTAAAA CACAGAT AATG ATCTGCG TTTTACAACTCAGAT TERM 2876 2094656 - 2094631 - R 77 -9.1 -3.76289 | opp_overlap 2094622, overlap 2094622 2094614 2094613 GTAAAACACAGATAA TGATCTGCGTT TTAC AACTCAGATCA CAATTACGCAGAAAA yeaC 2095178 - 2094906 - | hypothetical protein msrB 2095633 - 2095220 - | methionine sulfoxide reductase B TERM 2877 2095903 - 2095919 + H 73 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC gapA 2095975 - 2096970 + | glyceraldehyde-3-phosphate dehydrogenase A TERM 2878 2096997 - 2097014 + F 100 -11.3 -5.82316 | opp_overlap 2096997 ACTGTGATCTAAAAA GAGCGAC TTCG GTCGCTC TTTTTTTTACCTGAT TERM 2879 2097014 - 2096997 - f 100 -11.3 -4.66163 | opp_overlap 2096997 ACTGTGATCTAAAAA GAGCGAC TTCG GTCGCTC TTTTTTTTACCTGAT yeaD 2097054 - 2097938 + | hypothetical protein yeaE 2098843 - 2097989 - | putative oxidoreductase TERM 2880 2098881 - 2098897 + r 100 -13.7 -4.82901 | opp_overlap 2098881 CACCGTAATGCAAAA CAGGGCG TGA CGCCCTG TTTTTATGCACAAAA TERM 2881 2098897 - 2098881 - R 100 -13.7 -4.2803 | opp_overlap 2098881 CACCGTAATGCAAAA CAGGGCG TGA CGCCCTG TTTTTATGCACAAAA mipA 2099679 - 2098933 - | scaffolding protein for murein synthesizing machinery TERM 2882 2101078 - 2101065 - g 72 -4.5 -4.72127 | TAATAACAAAAACAA CGAAG CCTT CCTCG ATCGTGTTTACATCG TERM 2883 2101939 - 2101928 - g 70 -5.8 -4.19238 | CGTTTAACGCCAAAA CGTC AACC GACG AGCAAAAGAAACACG yeaG 2100115 - 2102049 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 2884 2102620 - 2102610 - g 81 -6.8 -4.68724 | opp_overlap 2102609 TGACCGAATATAAAA CGCA TCG TGCG GGTTATACCGCTAAC yeaH 2102162 - 2103445 + | hypothetical protein TERM 2885 2103451 - 2103477 + F 91 -9.4 -4.67755 | opp_overlap 2103451 2103449 TAAAGACTAAAACTA TCAGCCGGGTCA TTA TCGCCTGGCTGA TTTTTAGCTCACTGT TERM 2886 2104330 - 2104341 + G 71 -2.2 -4.94672 | ACAAAAATATTGGTT TGTC TGTG GGCA TTTTTACTGTTCTTT TERM 2887 2105031 - 2105011 - g 74 -7.5 -4.13872 | ACGGAAGCAGATAAA GCCTTACGC GAA GCGAAAAGC GAGGGGGGCAACAAA yeaI 2103592 - 2105067 + | putative diguanylate cyclase TERM 2888 2105085 - 2105103 + F 76 -8.1 -4.20106 | GCAAAAATATTCAGA GCCATGC TTTTT GCGTGGC TTTTGCATACAATTT yeaJ 2105248 - 2106738 + | putative diguanylate cyclase TERM 2889 2106892 - 2106917 + G 78 -10.5 -3.53012 | gap 1, opp_overlap 2106887 GTAGGTAAATGTGAA GCGGTGTCA-GA AAT TCGTGGCACCGC TTTAGGCCAGGGGGC yeaK 2106781 - 2107284 + | hypothetical protein ECUMN_2077 2107437 - 2107285 - | hypothetical protein yeaL 2107559 - 2108005 + | conserved hypothetical protein; putative inner membrane protein yeaM 2108783 - 2107962 - | putative DNA-binding transcriptional regulator TERM 2890 2108024 - 2108045 + g 93 -11.5 -4.1711 | opp_overlap 2108022, overlap 2108041 2108042 ATCCCGCAATATATC GGCCTGGCG TTTG CCCCAGGCC TTTCTTAAACATAGT TERM 2891 2108389 - 2108424 + g 82 -11.8 -3.55622 | overlap 2108418 ACCTGAATTAATCTG CGGGTCATCGGCTCAG CACG CTGAGTCGACGTCCTG TTTGCCAGGGTTAAA TERM 2892 2108594 - 2108582 - G 73 -9.1 -3.64703 | CGCCCGGTATCCAAA CCGCA TAT TGCGG TGGCACCATCCACAA yeaN 2108880 - 2110061 + | putative transporter; MFS superfamily TERM 2893 2110436 - 2110412 - g 86 -6.5 -5.1675 | gap 1 CTACTCAGCAAAAAA CACCA-CGCA GAACCA TGCGCTGGTG CTGGCCGACTGGCTA yeaO 2110116 - 2110463 + | hypothetical protein yoaF 2110739 - 2110485 - | conserved hypothetical protein; putative outer membrane protein yeaP 2110922 - 2111947 + | putative diguanylate cyclase TERM 2894 2112202 - 2112172 - T 71 -4.8 -4.45083 | gap 1, opp_overlap 2112179, overlap 2112174 2112175 2112179 GTCACATCTAGAAAA TAGCAAAGGCTGC CTGTGT GCAGCCTTTG-TG CAATTTACGCGTTAA TERM 2895 2112201 - 2112174 - T 79 -9.9 -3.83188 | opp_overlap 2112179, overlap 2112172 2112175 2112179 CACATCTAGAAAATA GCAAAGGCTGC CTGTGT GCAGCCTTTGT GCAATTTACGCGTTA TERM 2896 2112200 - 2112175 - T 86 -13.4 -2.8919 | opp_overlap 2112179, overlap 2112174 2112172 2112179 ACATCTAGAAAATAG CAAAGGCTGC CTGTGT GCAGCCTTTG TGCAATTTACGCGTT TERM 2897 2112179 - 2112196 + T 76 -8.4 -3.95219 | opp_overlap 2112179 2112175 2112174 2112172 CTAGAAAATAGCAAA GGCTGC CTGTGT GCAGCC TTTGTGCAATTTACG TERM 2898 2112196 - 2112179 - T 78 -8.4 -4.10958 | opp_overlap 2112179, overlap 2112175 2112174 2112172 CTAGAAAATAGCAAA GGCTGC CTGTGT GCAGCC TTTGTGCAATTTACG yeaQ 2112462 - 2112214 - | conserved hypothetical protein; putative inner membrane protein yoaG 2112792 - 2112610 - | hypothetical protein yeaR 2113155 - 2112796 - | hypothetical protein yeaS 2113966 - 2113328 - | putative neutral amino-acid efflux system TERM 2899 2113926 - 2113915 - G 79 -2.2 -5.29716 | CCAACACAATAAAAA TGGC CCCA ACCA GATAGGTCCAGTAAT TERM 2900 2114066 - 2114051 - R 74 -5.4 -4.64846 | TTAGAAAGGAGAAAA TCAGGT TTTA ACCCGA TATCAACCCGATAAT yeaT 2115016 - 2114093 - | putative DNA-binding transcriptional regulator TERM 2901 2115014 - 2115024 + g 71 -3.2 -4.78848 | CAGCGGTAAATTATT CATG ATT CGTG TTTTATGTTTCACCA yeaU 2115119 - 2116204 + | putative tartrate dehydrogenase TERM 2902 2116226 - 2116242 + F 100 -13.7 -5.87996 | overlap 2116235 ACCAGTTTATTTGAA CCGCGTC ACT GACGCGG TTTTTTTATTCGTTC TERM 2903 2116570 - 2116554 - g 79 -10.1 -3.78934 | CTTTTCCCACAACAA TCGGCCG ACG CGGCCAA CGCAATATACACTTT ECUMN_2092 2116455 - 2116769 + | Putative quarternary ammonium transport protein (fragment) yeaW 2118097 - 2119221 + | putative 2Fe-2S cluster-containing dioxygenase subunit TERM 2904 2119242 - 2119257 + F 71 -4.6 -4.7373 | opp_overlap 2119225 2119227, overlap 2119226 2119225 TCGGCGGCGGTATTT TCCGCC GCTG GGCTGA TTTTTGATGGAGTAC yeaX 2119277 - 2120242 + | putative dioxygenase subunit TERM 2905 2120243 - 2120293 + T 100 -18.3 -4.26344 | GTGTTGGATTTGTAG TTTGCCGAAGCCGGATGTGGCGC TGAGC GCGCCCAGTCCGGCTTCGGAAGA TTTTACTGCGGATAT rnd 2121423 - 2120296 - | ribonuclease D TERM 2906 2121472 - 2121456 - R 100 -10.8 -5.75342 | opp_overlap 2121469, overlap 2121467 GGGCGTCAAAAAAAA CGCCGG ATTAA CCGGCG TCTGACGACTGACTT fadD 2123178 - 2121493 - | acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) TERM 2907 2122223 - 2122211 - G 72 -7.7 -3.91144 | opp_overlap 2122210 2122207, overlap 2122197 2122196 TGCAGACTGGAGAAA TCCAG CTG CTGGA ACTCTTTATTGTTCA TERM 2908 2123337 - 2123361 + r 100 -14.4 -5.27335 | opp_overlap 2123337 2123341, overlap 2123356 TACCGTAAGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTTCTTTAAAAAC TERM 2909 2123361 - 2123337 - R 87 -14.4 -2.66106 | opp_overlap 2123337 2123356, overlap 2123341 TACCGTAAGAATGCA GAAACAGCGG ACCAG CCGCTGTTTC TTTTTCTTTAAAAAC TERM 2910 2123357 - 2123341 - R 81 -9.4 -4.02253 | opp_overlap 2123337 2123356, overlap 2123337 GTAAGAATGCAGAAA CAGCGG ACCAG CCGCTG TTTCTTTTTCTTTAA yeaY 2123964 - 2123383 - | putative outer membrane-associated lipoprotein yeaZ 2124698 - 2124003 - | putative peptidase yoaA 2126666 - 2124756 - | putative ATP-dependent helicase TERM 2911 2125278 - 2125267 - G 72 -4.4 -4.64846 | opp_overlap 2125267 GTACAAAGCATAAAA CAAC GACC GTTG TTAGCTTCGATGATC TERM 2912 2125491 - 2125502 + g 77 -5.8 -4.59853 | opp_overlap 2125490 2125491 TGCTGAGGTAAAGAT CCAG CTAC CTGG TTTTTGCGCCATTAA TERM 2913 2125845 - 2125825 - G 72 -6.1 -4.35518 | AATTGCAGACGAAAA TCCTGCGCA CTC TGGGCAAGA CGATCAGTGCACTTT TERM 2914 2126115 - 2126132 + g 77 -8.5 -4.09117 | CATCGCTTTTTTGCG TGCTTTG ACCA CAAAGCA TTCTTTATACATCGG yoaB 2126798 - 2127142 + | hypothetical protein TERM 2915 2127214 - 2127188 - f 72 -9.5 -3.25668 | overlap 2127186 AATTTATCGATAATA CTGGTCGGTTT TACAT AAATCGACCAG AGATTAAGATATTAC yoaC 2127504 - 2127863 + | hypothetical protein TERM 2916 2127893 - 2127923 + T 89 -8.4 -4.82901 | AGCATAAATGGGTCA GGACGCTTTTAA GCACATA TGAAAAGCGTCC TTTTTCTCACAACCA yoaH 2128162 - 2127983 - | hypothetical protein TERM 2917 2128342 - 2128370 + G 72 -8.1 -3.98159 | overlap 2128343 CGATGCTTTTACACT CCGGCTATGCCGA TCA TCCGTATAGCCGC TTTGATATTGTGGTC TERM 2918 2128343 - 2128369 + G 75 -11.6 -2.98173 | overlap 2128342 GATGCTTTTACACTC CGGCTATGCCGA TCA TCCGTATAGCCG CTTTGATATTGTGGT TERM 2919 2128950 - 2128963 + G 83 -5.2 -5.1615 | AATCAGGCCAACCGC GCGC CGTTTA GCGC TTTTTTACGTCTTGA TERM 2920 2129306 - 2129317 + G 72 -5.8 -4.3129 | overlap 2129304 ACACACCAGCGATCT GCTG CGCG CAGC TTTTCCTGGTGGCTC pabB 2128236 - 2129597 + | aminodeoxychorismate synthase, subunit I yeaB 2129601 - 2130179 + | putative NUDIX hydrolase sdaA 2130363 - 2131727 + | L-serine deaminase I TERM 2921 2131737 - 2131763 + F 100 -13 -3.88583 | overlap 2131738 GACTAATACTTCTTA CTCGCCCATCTG CAA CGGATGGGCGAA TTTATCCCCGCTTTC TERM 2922 2131738 - 2131762 + F 100 -16.5 -2.92668 | overlap 2131737 ACTAATACTTCTTAC TCGCCCATCTG CAA CGGATGGGCGA ATTTATCCCCGCTTT TERM 2923 2133419 - 2133385 - g 82 -11.3 -3.54424 | opp_overlap 2133415, overlap 2133386 CGTGATTTTCCCAAA TGGCTGGCGGGCAGC CAACC GCCGCCCGCCCAGCA TAATGGACATATCAC TERM 2924 2133419 - 2133386 - g 77 -12.4 -2.72511 | gap 1, opp_overlap 2133415, overlap 2133385 GTGATTTTCCCAAAT GGCTG-GCGGGCAGC CAACC GCCGCCCGCCCAGCA TAATGGACATATCAC adrB 2131858 - 2133456 + | putative cyclic di-GMP phosphodiesterase yoaE 2135016 - 2133460 - | putative membrane protein fused with conserved domain TERM 2925 2133846 - 2133835 - G 72 -5.8 -4.35483 | GGTCACGATAACAAA GCTC CCGC GAGC ACGACGCAGCACGCC TERM 2926 2134529 - 2134486 - G 72 -6.6 -4.15222 | opp_overlap 2134486 ATGCTGGTTAACAAA TCGCGTCAGCGGTTTCGATG CCAG CAGCATAACCGCCATCGCAA TCACTACCGCCGCCA TERM 2927 2135912 - 2135887 - g 100 -12.5 -4.58685 | AAACCGGTTGAAAAA GCCGCGCCAGC ACCC GCTGCCGCAGC ACCAAAAGCGGCTCC manX 2135479 - 2136450 + | fused mannose-specific PTS enzymes: IIA component ; IIB component manY 2136513 - 2137313 + | mannose-specific enzyme IIC component of PTS TERM 2928 2137376 - 2137362 - g 82 -2.8 -5.28778 | opp_overlap 2137363, overlap 2137363 ACCACCGAGAAAAAA CTCACT CAA AGTGAT ATTCGTGGCGTCTTC manZ 2137317 - 2138177 + | mannose-specific enzyme IID component of PTS TERM 2929 2138212 - 2138193 - f 74 -10.6 -2.62396 | opp_overlap 2138194 GACTGTTGTACACTA CCGGGGCC TTTT GGCCCCGT TTTTTTATCTGGAGG TERM 2930 2138194 - 2138211 + F 100 -14.1 -5.71712 | opp_overlap 2138193 ACTGTTGTACACTAC CGGGGCC TTTT GGCCCCG TTTTTTTATCTGGAG yobD 2138232 - 2138690 + | conserved hypothetical protein; putative inner membrane protein ECUMN_2113 2138877 - 2139122 + | hypothetical protein yebN 2139119 - 2139685 + | conserved hypothetical protein; putative inner membrane protein rrmA 2140491 - 2139682 - | 23S rRNA m1G745 methyltransferase TERM 2931 2140590 - 2140608 + r 70 -7.4 -3.86822 | opp_overlap 2140584 2140590 AAAGCAAAGTAAAAA GCCTCG CATTCGA CGAGGC TTTATAGCGAGATTG TERM 2932 2140608 - 2140590 - R 87 -8.1 -5.05577 | opp_overlap 2140590, overlap 2140584 AAAGCAAAGTAAAAA GCCTCGC ATTCG ACGAGGC TTTATAGCGAGATTG TERM 2933 2140680 - 2140664 - R 70 -9.5 -2.94747 | opp_overlap 2140655 GGATTCGATCAGATA GCTGTTA CGT TAACAGC TGCCGGACCTTTCTG cspC 2140866 - 2140657 - | stress protein, member of the CspA-family yobF 2141022 - 2140879 - | hypothetical protein TERM 2934 2141678 - 2141647 - R 72 -9.6 -3.25729 | gap 1, opp_overlap 2141654 TATAATCAGGATGAA TTGAGTAAC-CCTTC AAC GACGGGGTTACTCAA GATTGAGGTAGGATT yebO 2141979 - 2141692 - | hypothetical protein yobG 2142197 - 2142054 - | hypothetical protein TERM 2935 2142698 - 2142728 + r 83 -11.3 -3.29471 | opp_overlap 2142698, overlap 2142701 CTCATGCTAAATAAA GAACCTGTCTG TTTGATATT CAGACAGGTTC TTACTCTCATCAGAA TERM 2936 2142728 - 2142698 - R 93 -11.3 -4.44046 | opp_overlap 2142698 2142701 CTCATGCTAAATAAA GAACCTGTCTG TTTGATATT CAGACAGGTTC TTACTCTCATCAGAA kdgR 2143529 - 2142738 - | DNA-binding transcriptional repressor KdgR TERM 2937 2144892 - 2144865 - g 71 -9 -3.46117 | ACCACACCATTATAA CCTCCGCTCCGC GCGA ACGTAGCGGTGG GGCCAGTGGCATGTT yebQ 2143706 - 2145079 + | putative transporter; MFS superfamily TERM 2938 2145079 - 2145110 + T 79 -11.7 -2.74026 | opp_overlap 2145085, overlap 2145085 ACGAGCCTGGGCATA AAAAAAGCGCGTC GATCAG GACGCGCTTTTTA GTATTTACTTCATAT TERM 2939 2145085 - 2145104 + T 100 -10.7 -4.946 | opp_overlap 2145085, overlap 2145079 CTGGGCATAAAAAAA GCGCGTC GATCAG GACGCGC TTTTTAGTATTTACT TERM 2940 2145104 - 2145085 - T 100 -10.7 -5.60993 | opp_overlap 2145085 2145079 CTGGGCATAAAAAAA GCGCGTC GATCAG GACGCGC TTTTTAGTATTTACT htpX 2146006 - 2145125 - | membrane-associated Zn-dependent endopeptidase; self-cleaved TERM 2941 2146046 - 2146036 - R 79 -6.8 -4.65916 | opp_overlap 2146043, overlap 2146038 2146043 2146044 CTCAGTTTAACAAAA CGCA ATA TGCG ATACCCACATCGTAT TERM 2942 2146168 - 2146191 + r 100 -14 -3.42147 | opp_overlap 2146168 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC TERM 2943 2146191 - 2146168 - R 100 -14 -5.00616 | opp_overlap 2146168 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC prc 2148246 - 2146198 - | carboxy-terminal protease for penicillin-binding protein 3 TERM 2944 2146670 - 2146680 + g 72 -8.2 -3.77219 | GGCATGATGATGTCT GGCG TTA CGCC TTTACGTTGCGTACT TERM 2945 2147894 - 2147879 - G 77 -8.2 -4.14392 | opp_overlap 2147879 2147878, overlap 2147880 TGGTAACGCTCAAAA CGGCGC TTTT GCGCCA GATTGTAGAGATCGT proQ 2148964 - 2148266 - | ProP transporter amplifier TERM 2946 2148556 - 2148568 + g 70 -6.9 -4.06419 | overlap 2148521 GTGGCTTGCGTTCGC GGCGC GGT GCGTC TTCTTTCTCACCAGC yebR 2149612 - 2149061 - | hypothetical protein TERM 2947 2149630 - 2149606 - G 72 -6.6 -4.26903 | opp_overlap 2149609 GCCAGCCTATTAAAA TAAGCATTAA ATGCG TTAATGCTCA AGATCATTCCCATCA TERM 2948 2149927 - 2149949 + GH 72 -9.8 -3.14125 | overlap 2149924 CATGCTGTTGCTTAT GCCGTTTGCC TGG GGCGAACCGC TGTTGCATATCTGGC TERM 2949 2150773 - 2150791 + GH 78 -8.8 -4.08111 | overlap 2150775 GACCTGGATTGGTCG CTGGTCGA TGC TCGACCTG TTTGTCATATCTTTA TERM 2950 2150775 - 2150789 + GH 78 -10 -3.61777 | overlap 2150773 CCTGGATTGGTCGCT GGTCGA TGC TCGACC TGTTTGTCATATCTT yebS 2149688 - 2150971 + | conserved hypothetical protein; putative inner membrane protein yebT 2150940 - 2153573 + | hypothetical protein TERM 2951 2153581 - 2153606 + F 100 -14.7 -3.9712 | opp_overlap 2153575, overlap 2153582 CCAAATAATGCCCAC TGCTCCGGCGT GCCT GCGCCGGAGCG TTTATGCTAAACTGC TERM 2952 2153582 - 2153605 + F 100 -16 -2.97951 | opp_overlap 2153575, overlap 2153581 CAAATAATGCCCACT GCTCCGGCGT GCCT GCGCCGGAGC GTTTATGCTAAACTG TERM 2953 2153725 - 2153735 + G 70 -4 -4.63932 | ATGCCTTCGACGCTC TCAT TTG ATGA TTTTCTTGCCGCCTG TERM 2954 2154298 - 2154288 - g 86 -6.8 -5.02074 | CGATGCGCTAAAAAA CTGG TCA CCAG AAAGCAATCAGGAAA yebU 2153653 - 2155092 + | putative RNA AdoMet-dependent methyltransferase TERM 2955 2155224 - 2155235 + G 70 -7.2 -4.13767 | GATGAAAACCAGTGT GCGC ATAG GCGC TTTTGAAATCGACGA yebV 2155210 - 2155446 + | hypothetical protein TERM 2956 2155474 - 2155458 - f 71 -5 -4.47888 | opp_overlap 2155458, overlap 2155455 CTAATCCAAAAAGAA CCCGTC GGCAT GGCGGG TTATTTGTCCTGGTT TERM 2957 2155458 - 2155474 + F 74 -7.9 -4.12857 | opp_overlap 2155458 2155455 CTAATCCAAAAAGAA CCCGTCG GCA TGGCGGG TTATTTGTCCTGGTT TERM 2958 2155664 - 2155675 + G 72 -7.2 -4.19746 | opp_overlap 2155663 GAGCGATCAACGGAT CCGC CATG GCGG TTGTTTTCCAATCGA yebW 2155467 - 2155742 + | hypothetical protein pphA 2156399 - 2155743 - | serine/threonine-specific protein phosphatase 1 TERM 2959 2156568 - 2156539 - R 79 -5.1 -5.10064 | gap 1, overlap 2156541 TTTAACAGATAAAAA GAGACCGAACAC GATTCCT GTATTCGGTC-C AGGGAAATGGCTCTT TERM 2960 2156567 - 2156541 - R 80 -8.8 -4.16832 | overlap 2156539 TAACAGATAAAAAGA GACCGAACAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT TERM 2961 2156758 - 2156729 - R 73 -5.1 -4.70879 | gap 2, opp_overlap 2156729 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA TERM 2962 2156729 - 2156758 + r 100 -5.1 -5.7946 | gap 2, opp_overlap 2156729 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA yebY 2157136 - 2156795 - | hypothetical protein yebZ 2158021 - 2157149 - | conserved hypothetical protein; putative inner membrane protein TERM 2963 2157921 - 2157897 - G 74 -6.4 -4.51196 | opp_overlap 2157900 TGTAAACGCAGAAAA CGCTTCGTCA GCAAG CGACGAATCG TTAAGGGAGCCAGCC TERM 2964 2158002 - 2157992 - G 70 -6.8 -4.02132 | GGTGAAATGGATAAA TCGC AGC GCGA TCCAGGTAAACGCCA yobA 2158399 - 2158025 - | hypothetical protein holE 2158538 - 2158768 + | DNA polymerase III, theta subunit yobB 2158870 - 2159526 + | hypothetical protein TERM 2965 2159589 - 2159575 - g 70 -7.1 -4.1399 | overlap 2159571 TTATCGATACAGAAA CCTGC GGTTT GCAGG GAGGGATCGTTGAGA exoX 2159550 - 2160212 + | DNA exonuclease X ptrB 2162269 - 2160209 - | protease II TERM 2966 2161503 - 2161487 - G 71 -2.2 -4.96501 | gap 1, opp_overlap 2161488, overlap 2161488 CGGCAGAAAAACAAA CGGCTCG GCAT CG-GCCA TTTCCGCGTCCAGCA TERM 2967 2161905 - 2161895 - G 75 -5.4 -4.67982 | opp_overlap 2161903 GCCCATCGAATAAAA CTCA CTA TGAG CTGCGCGCTTGTTGG TERM 2968 2162402 - 2162362 - R 100 -13.9 -4.65895 | overlap 2162400 TTGCTTAGCGAAAAA CGCCGTAAACCCTCGCCCA ATG CGGGCGGGGATATAAGGCG AAAAGCCCGCAGGGC TERM 2969 2162417 - 2162407 - R 76 -8.2 -4.23007 | opp_overlap 2162407, overlap 2162400 GATATAAGGCGAAAA GCCC GCA GGGC TTTAAAGATCAATCA ECUMN_2141 2162851 - 2162426 - | transposase, IS200, part of IS605 with following ORF TERM 2970 2163088 - 2163073 - g 73 -9 -3.695 | CGTAAAGACCTCAAA CCACTG CTTG CAGTGG CGAAGAAATCCCGCC ECUMN_2142 2162908 - 2164077 + | transposase, part of IS605 with preceding ORF yebE 2164900 - 2164241 - | conserved hypothetical protein; putative inner membrane protein TERM 2971 2164647 - 2164659 + g 74 -3.3 -4.88684 | overlap 2164647 TGCGGTTCGTCCTGA TGCGC CGC GCGAA TTTTATCTTTGTATT yebF 2165595 - 2165227 - | hypothetical protein TERM 2972 2165410 - 2165422 + g 75 -4.7 -4.73613 | overlap 2165411 TTGATCATCTGCCCA GCGCG CCA CGCGA TTTTGTTGATAATCA yebG 2165940 - 2165650 - | conserved hypothetical protein regulated by LexA purT 2166074 - 2167252 + | phosphoribosylglycinamide formyltransferase 2 TERM 2973 2167297 - 2167277 - T 100 -15.5 -4.90296 | opp_overlap 2167277 AAAACGCTACAAAAA TGCCCGATC CTC GATCGGGCA TTTTGACTTTTACAG TERM 2974 2167277 - 2167297 + T 100 -15.5 -4.4267 | opp_overlap 2167277 AAAACGCTACAAAAA TGCCCGATC CTC GATCGGGCA TTTTGACTTTTACAG eda 2167948 - 2167307 - | multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase TERM 2975 2167903 - 2167891 - G 71 -9.1 -3.44051 | opp_overlap 2167899 2167900, overlap 2167900 TTTTTACCACGATAA CCGGT ACA ACCGG GCCGGTGGTCAGGAT TERM 2976 2168009 - 2168026 + r 82 -7.7 -4.56597 | GATACAGGTTGCGCC CTGTTCG GCAC CGGACAG TTTTTCACGCAAGGC edd 2169796 - 2167985 - | 6-phosphogluconate dehydratase TERM 2977 2168476 - 2168496 + g 76 -7.5 -4.25104 | overlap 2168477 CTTCAATCACCTGGT TCTCTACCG GCA CGGCAGAGG TTTTCATAACCGCAC TERM 2978 2169951 - 2169926 - R 100 -11.2 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGTG-GG TGAAT CCGCACGAGGC CTGAAAGTGTAAAAA zwf 2171506 - 2170031 - | glucose-6-phosphate dehydrogenase TERM 2979 2171466 - 2171432 - G 89 -13.6 -3.22388 | overlap 2171436 CAGGGAAGGCAGCAA TTTACGACGCGCAAGG TCG CCTTTCGCGCCGAAAA TGACCAGGTCACAGG TERM 2980 2171462 - 2171436 - G 90 -14.4 -2.57721 | overlap 2171432 GAAGGCAGCAATTTA CGACGCGCAAGG TCG CCTTTCGCGCCG AAAATGACCAGGTCA TERM 2981 2171878 - 2171863 - g 81 -4.7 -5.02476 | overlap 2171852 ATATGCTGGAAAAAA TCCAG TCTCAG CTGGA ACATTTGAGCAAATC yebK 2171844 - 2172713 + | putative DNA-binding transcriptional regulator TERM 2982 2173179 - 2173168 - g 95 -5.8 -5.38054 | GGCGACAAAGAAAAA GTCG GTAT CGAC TACAAAGGCCTGCCT pykA 2172841 - 2174283 + | pyruvate kinase II TERM 2983 2174329 - 2174284 - T 71 -9 -3.27994 | gap 2, opp_overlap 2174287, overlap 2174287 TTAACGGTAGAGTAA GTAC-GTTG-CCGGATGCGGCG AAAA CGCCTCATCCGGCCTACAGTTC AATGATAGTTCAACA TERM 2984 2174325 - 2174287 - T 79 -11.7 -2.81725 | gap 1, opp_overlap 2174287, overlap 2174284 ACGGTAGAGTAAGTA CGTTG-CCGGATGCGGCG AAAA CGCCTCATCCGGCCTACA GTTCAATGATAGTTC TERM 2985 2174391 - 2174409 + T 100 -10.3 -5.99154 | TATCACACGGCGGAA GCCTCTC CTCGC GAGAGGC TTTTTTTATTTGATG lpxM 2175386 - 2174415 - | myristoyl-acyl carrier protein (ACP)-dependent acyltransferase TERM 2986 2174897 - 2174885 - G 79 -4.7 -4.9755 | opp_overlap 2174885 AGACATAATCAAAAA CCGGG TTG CCCTG ATTATGGAACATCGC TERM 2987 2175489 - 2175467 - R 100 -10.6 -5.99154 | CACCAAATAAAAAAA GCCGGTAC TGACTGC GTACCGGC TGCGAATGGATGTTA yebA 2176828 - 2175506 - | putative metallopeptidase TERM 2988 2176207 - 2176223 + g 81 -10.1 -3.87815 | opp_overlap 2176218, overlap 2176194 CTGCGCTCACTTCGG CGCTGGT TAA ACCGGCG TTTCTGGCGCTGGCA znuA 2177776 - 2176844 - | zinc transporter subunit: periplasmic-binding component of ABC superfamily TERM 2989 2177120 - 2177131 + g 72 -4.4 -4.59773 | ATGACCAAGCGGTGT CAGT CCGA ACTG TTTTTCGAAATAGCC TERM 2990 2177372 - 2177385 + g 77 -3.1 -5.03715 | overlap 2177361 2177370 GAAATCGCCGTGATG GTGAT CTTC GTCAC TTTTTTCCGCGTGGT znuC 2177855 - 2178610 + | zinc transporter subunit: ATP-binding component of ABC superfamily znuB 2178607 - 2179392 + | zinc transporter subunit: membrane component of ABC superfamily ruvB 2180554 - 2179544 - | ATP-dependent DNA helicase, component of RuvABC resolvasome TERM 2991 2180209 - 2180180 - G 74 -10.1 -3.48593 | gap 1, opp_overlap 2180190 CATTGCCGGATACAA CACC-TCTTCCACC ACT GGCGAAAGACGGTG GATCTCATCAATAAA ruvA 2181174 - 2180563 - | component of RuvABC resolvasome, regulatory subunit TERM 2992 2181243 - 2181224 - H 100 -6.4 -5.67063 | overlap 2181225 TGTATGATAAAAAAA TGCTGGAT AGAT ATCCAGCG AAGGATGAAGAAAAC TERM 2993 2181242 - 2181225 - H 81 -9.9 -3.99153 | overlap 2181224 GTATGATAAAAAAAT GCTGGAT AGAT ATCCAGC GAAGGATGAAGAAAA TERM 2994 2181406 - 2181396 - H 70 -2.6 -5.00616 | opp_overlap 2181396 CGCCTCCTGAAAAAA TAAA TTT TTTA TGCTATTACGTATAT TERM 2995 2181731 - 2181719 - g 85 -3.4 -5.35721 | ACAGAACAACAAAAA CAAC GAATT GTTG AACAGGTTCCCTCCC TERM 2996 2182045 - 2182020 - g 77 -10.4 -3.61178 | opp_overlap 2182036 CGGAGGGAGTGGAAA CGCCTCAGCC GGAACT GACCGAGGCG GTATAACTTAACGCA yebB 2181449 - 2182051 + | hypothetical protein ruvC 2182574 - 2182053 - | component of RuvABC resolvasome, endonuclease TERM 2997 2182187 - 2182216 + g 86 -7.1 -5.02074 | opp_overlap 2182191 TAGCGGGCAGTTTCA GCAAGGTGCGG ACCATATG CTGCACCTGGC TTTTTTCAGCACTAC yebC 2183349 - 2182609 - | hypothetical protein nudB 2183821 - 2183378 - | dATP pyrophosphohydrolase aspS 2185595 - 2183823 - | aspartyl-tRNA synthetase yecD 2185905 - 2186471 + | putative hydrolase TERM 2998 2187152 - 2187128 - g 72 -10 -3.31915 | opp_overlap 2187127 2187128, overlap 2187126 2187125 TGGTTACAAAAATTA GCGCAGTGGC ATCAG ACCACTACGC CTTATCTTTTTTTAC yecE 2186468 - 2187286 + | hypothetical protein yecN 2187339 - 2187734 + | conserved hypothetical protein; putative inner membrane protein yecO 2187775 - 2188518 + | AdoMet-dependent methyltransferase yecP 2188515 - 2189486 + | hypothetical protein TERM 2999 2189515 - 2189488 - T 87 -11.2 -3.60792 | opp_overlap 2189493, overlap 2189493 CGCGTAAGCCGTAAA GATTAGCGCCCG TTTC CGGGCGCTTTTC ACGTCTTATGCCTGA TERM 3000 2189493 - 2189510 + T 100 -14.1 -4.20712 | opp_overlap 2189488 2189493 AAGCCGTAAAGATTA GCGCCCG TTTC CGGGCGC TTTTCACGTCTTATG TERM 3001 2189510 - 2189493 - T 89 -14.1 -2.85069 | opp_overlap 2189493, overlap 2189488 AAGCCGTAAAGATTA GCGCCCG TTTC CGGGCGC TTTTCACGTCTTATG torZ 2191950 - 2189521 - | trimethylamine N-oxide reductase system III, catalytic subunit TERM 3002 2191900 - 2191920 + g 72 -8.2 -3.794 | overlap 2191902 TGTCACCACCAGCGC CCCAGCGG CAATA CCGCTGTG TTTAATAAATTCACG TERM 3003 2191902 - 2191918 + g 71 -9.4 -3.48105 | overlap 2191900 TCACCACCAGCGCCC CAGCGG CAATA CCGCTG TGTTTAATAAATTCA torY 2193075 - 2191975 - | TMAO reductase III (TorYZ), cytochrome c-type subunit TERM 3004 2193058 - 2193046 - G 71 -2.7 -4.77036 | CGCTATCAGCAAAAA CATTA ACC CAATG CGTTTTTTCCCTCGC TERM 3005 2193349 - 2193360 + r 84 -4.4 -5.39755 | CGCTCAACTGATCAC CGAA ATCG TTCG TTTTTTATACTTCTC TERM 3006 2193413 - 2193389 - R 100 -10 -5.60993 | TCGGGGATAAAAAAA GGCCCCTG TTGAAATTG CAGGGGCC TGGTACGAGCAAGCA cutC 2194207 - 2193461 - | copper homeostasis protein yecM 2194787 - 2194221 - | putative metal-binding enzyme TERM 3007 2194962 - 2194980 + H 78 -11 -3.20382 | ATTTCTTTAACTGGT GCGGGCAA TTT TTGCTCGC TTCATCAATGTAAGG TERM 3008 2195063 - 2195084 + G 70 -10.1 -3.18264 | ATTGCGGCAGGCGCG CCTGCGGAT TGCG AACCGCAGG TTCGTCAGTCAGCAA TERM 3009 2196323 - 2196313 - g 70 -4.6 -4.57569 | overlap 2196295 GGATCTCTCCAAAAA CCGC ACC ACGG ACTACATCTTCGACT argS 2195003 - 2196736 + | arginyl-tRNA synthetase TERM 3010 2196778 - 2196755 - T 100 -12.5 -4.16943 | opp_overlap 2196746 2196755 CGTTATACGGCAAAA GCCGATGTC ATGGCA GACATCGGC TTTTTTATCATTAAC TERM 3011 2196755 - 2196778 + T 100 -12.5 -5.37345 | opp_overlap 2196755, overlap 2196746 CGTTATACGGCAAAA GCCGATGTC ATGGCA GACATCGGC TTTTTTATCATTAAC flhE 2197181 - 2196789 - | hypothetical protein flhA 2199259 - 2197181 - | putative flagellar export pore protein flhB 2200400 - 2199252 - | flagellar export pore protein TERM 3012 2199303 - 2199283 - G 72 -4.6 -4.63218 | TTCTCGTTAATAAAA TCCAGGGC TTCCG GCACCGGA AGATGAGTAGGTTGT TERM 3013 2199731 - 2199747 + g 84 -7.9 -4.62783 | CATCACGAATATCCT GCCGCGA CAT TCGCAGC TTTTTCAGGTGGCTG TERM 3014 2200317 - 2200343 + g 71 -2.2 -4.9218 | overlap 2200318 CGTTAATTCACGTGA ACGCGGGA TTTGCCCCTCT TCCCGCGC TTTTTCTAGTCGGTG cheZ 2201246 - 2200602 - | chemotaxis regulator, protein phosphatase for CheY TERM 3015 2201177 - 2201155 - G 74 -9.8 -3.53811 | overlap 2201170 CCCAGCTCCCGCAAA CTGTCGCGCA GCA TACGCGTCAG GCTGCCGATGCGCGC cheY 2201646 - 2201257 - | chemotaxis regulator transmitting signal to flagellar motor component cheB 2202710 - 2201661 - | fused chemotaxis regulator ; protein-glutamate methylesterase in two-component regulatory system with CheA cheR 2203573 - 2202713 - | chemotaxis regulator, protein-glutamate methyltransferase tap 2205193 - 2203592 - | methyl-accepting protein IV TERM 3016 2204195 - 2204210 + g 74 -2.4 -5.055 | overlap 2204189 2204192 2204196 AACACCGCCCGCCTG CGCCGT TGTC GCGGCA TTTTTTGCCAGTTCC TERM 3017 2204804 - 2204823 + g 74 -6.4 -4.46757 | overlap 2204814 CTGATGTTCGAGATC GTTGTGCC AGCG GGCAAAAC TTTTCTCCGTCTCTT tar 2206900 - 2205239 - | methyl-accepting chemotaxis protein II TERM 3018 2206145 - 2206122 - G 73 -9.6 -3.64822 | opp_overlap 2206095, overlap 2206141 ACGGTGTCAGTCAAA GAGCGTTGCA TATG TGAAACGCTC TGCGCCAGGTCGCCC TERM 3019 2207016 - 2206996 - R 100 -8.3 -5.67283 | opp_overlap 2206996 AACTGAAATAAAAAA CCCGATG CGCAGGT CATCGGG TTCATTGCAATTGAG cheW 2207548 - 2207045 - | purine-binding chemotaxis protein TERM 3020 2207091 - 2207101 + g 71 -3.2 -4.74706 | opp_overlap 2207075 AGCGCCATCTCTTCG CTGT TCA GCAG TTTTTCGATGTTCAC cheA 2209533 - 2207569 - | fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase ; signal sensing protein TERM 3021 2207758 - 2207774 + g 72 -7.9 -3.89346 | opp_overlap 2207755 2207756 ATCCACCAGCAAGGC GTAGCGG CGA CCGCCAC TTTGTAAGATCACCA TERM 3022 2209124 - 2209146 + g 76 -11.2 -3.41527 | overlap 2209130 CTTAATCGGGTCACT GCGGATGGCG TTT CGCCTTTCGC TTCTAATGCCAGTTG TERM 3023 2209130 - 2209140 + g 72 -8.2 -3.82083 | overlap 2209124 CGGGTCACTGCGGAT GGCG TTT CGCC TTTCGCTTCTAATGC motB 2210464 - 2209538 - | protein that enables flagellar motor rotation TERM 3024 2209576 - 2209594 + g 85 -8.8 -4.56775 | TTGTGGGAACACTGA CCTGTGGT GCA ACCTCAGG TTTTTCCAGGGCGCT motA 2211348 - 2210461 - | proton conductor component of flagella motor TERM 3025 2210732 - 2210712 - G 70 -3.9 -4.72029 | CGTAAGCCAATAAAA TGCCGAGGA AAG TCCCCACCA TCGCATGTGCGATAA TERM 3026 2211448 - 2211425 - R 100 -12.5 -5.75342 | TTGGGGCAAAAAAAA GCAGCGGTA CGTCGT TACCGCTGC TGGAATGTTGCGCCA flhC 2212053 - 2211475 - | DNA-binding transcriptional dual regulator with FlhD flhD 2212415 - 2212056 - | DNA-binding transcriptional dual regulator with FlhC TERM 3027 2212686 - 2212667 - H 77 -9.4 -3.63515 | TGCGATTTTCAATAA TGTGTGAT GCAG ATCACACA AAACACTCAATTACT TERM 3028 2213529 - 2213562 + G 100 -14.1 -3.71487 | gap 1, opp_overlap 2213527, overlap 2213530 2213552 AATCACAATCACAGT TTCTTTTCGC-GAGCA TCC TGCTCGGCGAAAAGAG TTATTGCCTCTAGTG TERM 3029 2213530 - 2213561 + G 95 -15.4 -2.8241 | gap 1, opp_overlap 2213527, overlap 2213529 2213552 ATCACAATCACAGTT TCTTTTCGC-GAGCA TCC TGCTCGGCGAAAAGA GTTATTGCCTCTAGT yecG 2213187 - 2213615 + | universal stress protein otsA 2215046 - 2213622 - | trehalose-6-phosphate synthase TERM 3030 2214987 - 2214965 - GT 74 -9.8 -3.29144 | opp_overlap 2214985 TCAGTGCCCCCAGAA TGCCAACGGC AAG GCCACCGGCA CTGGCGGCGTGCTCA otsB 2215821 - 2215021 - | trehalose-6-phosphate phosphatase, biosynthetic TERM 3031 2215949 - 2215924 - R 100 -12.6 -3.81414 | opp_overlap 2215926 ATTTGTAACGAAGAA CAGCCAACCG TTGTGG CGGCTGGCTG TGGTGGGAAAAAACG araH 2216977 - 2215988 - | fused L-arabinose transporter subunits of ABC superfamily: membrane components araG 2218503 - 2216989 - | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components TERM 3032 2218533 - 2218559 + r 93 -10.8 -4.57341 | overlap 2218534 2218535 TCACTGGTCGTTCAC ACCCCCTCTGCA TCA TGCAGAGGGGAA TTTTTCCGGCAAATT TERM 3033 2218534 - 2218558 + r 100 -14.3 -3.33922 | overlap 2218533 2218535 CACTGGTCGTTCACA CCCCCTCTGCA TCA TGCAGAGGGGA ATTTTTCCGGCAAAT TERM 3034 2218535 - 2218557 + r 100 -17.8 -2.60032 | overlap 2218534 2218533 ACTGGTCGTTCACAC CCCCTCTGCA TCA TGCAGAGGGG AATTTTTCCGGCAAA araF 2219562 - 2218573 - | L-arabinose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3035 2219616 - 2219604 - H 78 -6.3 -4.62069 | opp_overlap 2219604 TGTGTAGGGCAAAAA CGAAT GAC ATTCG TTAAATTAATCGGAA TERM 3036 2219801 - 2219779 - H 71 -7.8 -3.84996 | opp_overlap 2219784 AAGACATAAGGGAAA GTCAATTTGT CAG ACAAATTGTC GAATGCACAGCAGAT TERM 3037 2220760 - 2220737 - g 70 -5.2 -4.41633 | GATCTGGAAAAAGAA CAGCAGCATG ATGG CCTGTTGCTG CAAACCATTCTTGAT yecI 2220359 - 2220862 + | putative ferritin-like protein TERM 3038 2220865 - 2220897 + T 76 -6.2 -4.56597 | opp_overlap 2220868 2220870, overlap 2220866 TCAGCTGCATTGATC ATACATCGGCGCTA ATGCA TTGCGCCGATGAAG TTTTTGAGAAACCGC TERM 3039 2220866 - 2220896 + T 74 -9.7 -3.33744 | opp_overlap 2220868 2220870, overlap 2220865 CAGCTGCATTGATCA TACATCGGCGCTA ATGCA TTGCGCCGATGAA GTTTTTGAGAAACCG TERM 3040 2220894 - 2220868 - T 82 -12.3 -2.80816 | opp_overlap 2220866 2220865, overlap 2220870 GCTGCATTGATCATA CATCGGCGCTA ATGCA TTGCGCCGATG AAGTTTTTGAGAAAC TERM 3041 2220909 - 2220936 + T 100 -11.3 -5.52986 | opp_overlap 2220909 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTTTT TGAAGCAGCGG TTTTTTTAATGGGAT TERM 3042 2220936 - 2220909 - T 100 -13.5 -3.86822 | opp_overlap 2220909 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTTTT TGAAGCAGCGG TTTTTTTAATGGGAT yecJ 2221193 - 2220942 - | hypothetical protein TERM 3043 2221280 - 2221307 + H 76 -10 -3.30007 | opp_overlap 2221279 2221287, overlap 2221287 CCGTCATCAGGACAC AAAAAAACCTGC CGGA GCAGGTTTTTTG TTATCGGAACATATT TERM 3044 2221287 - 2221300 + H 100 -8.1 -5.55769 | opp_overlap 2221279 2221287, overlap 2221280 CAGGACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 3045 2221300 - 2221287 - H 100 -8.1 -5.74122 | opp_overlap 2221287 2221280, overlap 2221279 CAGGACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA ECUMN_2198 2221305 - 2221451 + | hypothetical protein TERM 3046 2221498 - 2221471 - f 70 -7.2 -3.89607 | overlap 2221458 2221456 2221455 CATCACAAAAATCAA TCTTTATGTGAT GCAA ATCACATAAATA CCCCTTTGATGTTAT TERM 3047 2221574 - 2221586 + F 75 -9.1 -3.64488 | opp_overlap 2221574 2221573 2221571 2221561, overlap 2221573 GATGGCAAGAAATAG CGCCT GCC AGGCG TCTTTTCCGGCCATT yecR 2221657 - 2221980 + | hypothetical protein TERM 3048 2222017 - 2221984 - f 74 -9.7 -3.34398 | opp_overlap 2221993, overlap 2221982 2221985 GTCTTTCTCTAAATA TTTTAATCAGCGAGG GGAT CTTCGCTGATTAAAG AAATAGCGGTAATGC TERM 3049 2222016 - 2221985 - f 84 -13.2 -2.60496 | opp_overlap 2221993, overlap 2221984 2221982 TCTTTCTCTAAATAT TTTAATCAGCGAGG GGAT CTTCGCTGATTAAA GAAATAGCGGTAATG ftn 2222151 - 2222648 + | ferritin iron storage protein (cytoplasmic) TERM 3050 2222656 - 2222678 + T 87 -11.2 -3.61178 | overlap 2222657 AAAACTAATGCTCTC AGGCGGCAGG TTT TCTGCCGCCG TTTCAAATCAGTGAC TERM 3051 2222657 - 2222677 + T 89 -14.7 -2.76492 | overlap 2222656 AAACTAATGCTCTCA GGCGGCAGG TTT TCTGCCGCC GTTTCAAATCAGTGA yecH 2222925 - 2222686 - | hypothetical protein TERM 3052 2222962 - 2222944 - H 75 -4.4 -5.00616 | overlap 2222945 TCCTCCTCGAAAAAA GGCTAGCG TAG CGATTGCC GCTTACCAAGACTTT TERM 3053 2224077 - 2224087 + G 72 -8.2 -3.7229 | overlap 2224075 CAATTACCTTTCTGC CGCC GTT GGCG TTTGCACTGTTTTAT tyrP 2223116 - 2224327 + | tyrosine transporter TERM 3054 2224350 - 2224379 + T 72 -7.9 -3.94333 | GCCTCAAATTCCTTA TTGGGTGCCAG AATTAACG CTGACACCCAA TTTGATCTCTTAATG yecA 2225054 - 2224389 - | conserved hypothetical protein; putative metal-binding protein TERM 3055 2225203 - 2225190 - R 100 -8.1 -5.64274 | opp_overlap 2225190 GCAGGCACAAAAAAA CCACC CGAA GGTGG TTTCACGACACTGCT TERM 3056 2225291 - 2225311 + r 72 -10.5 -2.89742 | overlap 2225294 GCACAGCGCGAACGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 3057 2225294 - 2225308 + r 72 -8.6 -3.5947 | overlap 2225291 CAGCGCGAACGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 3058 2225446 - 2225468 + r 74 -7.7 -4.13767 | CAGGCCTTTCAGCCA GACATCCGC TTGAC GCCGATGTC TTTTAAACTGGAGCG TERM 3059 2225510 - 2225526 + r 74 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 2226252 - 2225704 - | phosphatidylglycerophosphate synthetase uvrC 2228141 - 2226309 - | excinuclease UvrABC, endonuclease subunit uvrY 2228794 - 2228138 - | DNA-binding response regulator in two-component regulatory system with BarA TERM 3060 2229044 - 2229033 - H 73 -4.4 -4.80167 | CAGCAAAAATGAAAA TCAG CCCG CTGA ATATGTAACATTAAT TERM 3061 2229405 - 2229394 - g 81 -5.8 -4.77986 | TTAAAGATGGAAAAA CAGC TTGC GCTG ATCGAAGACGAAACC yecF 2229253 - 2229477 + | hypothetical protein TERM 3062 2229516 - 2229480 - T 86 -12.4 -3.14051 | opp_overlap 2229485, overlap 2229485 CTACCGTCAGTAATA TAAAACCGGCTGAGAG CGTGC CTTTCAGCCGGTTTTT GCATCTGGCACGCAG TERM 3063 2229511 - 2229485 - T 100 -12.3 -4.70583 | opp_overlap 2229485, overlap 2229480 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTTTTGCATCTGGCA TERM 3064 2229485 - 2229511 + T 100 -14.5 -4.70659 | opp_overlap 2229480 2229485 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTTTTGCATCTGGCA sdiA 2230267 - 2229545 - | DNA-binding transcriptional activator TERM 3065 2230456 - 2230486 + r 100 -5.3 -5.70522 | gap 1, opp_overlap 2230451 2230450, overlap 2230457 2230459 CGCTTGAAATGGCGT CCCGCCCCGACAGG TGAA TC-GTCGGGGCTGA TTTTTTCTTATTATT TERM 3066 2230457 - 2230485 + r 76 -8.8 -3.98653 | gap 1, opp_overlap 2230451 2230450, overlap 2230456 2230459 GCTTGAAATGGCGTC CCGCCCCGACAGG TGAA TC-GTCGGGGCTG ATTTTTTCTTATTAT TERM 3067 2230459 - 2230483 + r 77 -10 -3.54636 | gap 1, opp_overlap 2230451 2230450, overlap 2230457 2230456 TTGAAATGGCGTCCC GCCCCGACAGG TGAA TC-GTCGGGGC TGATTTTTTCTTATT yecC 2231249 - 2230497 - | putative transporter subunit: ATP-binding component of ABC superfamily transporter yecS 2231914 - 2231246 - | putative transporter subunit: permease component of ABC superfamily transporter TERM 3068 2231471 - 2231459 - G 72 -7.7 -3.88291 | TACCAGGCTGATAAA GCTGT TCG ACAGC GGCGGCAACGCCACC TERM 3069 2231763 - 2231748 - G 81 -4.6 -5.08178 | overlap 2231749 ATAGAGATATAAAAA CGCGCC AGCC AGCGCA CGGGCCAGATTGGCG yedO 2232915 - 2231929 - | D-cysteine desulfhydrase, PLP-dependent TERM 3070 2232981 - 2233000 + r 87 -4.9 -5.39755 | opp_overlap 2232982, overlap 2232982 ACGCGTAAATAAAAA AGGCGCT AGTGAA AGCGCCC TTTTTTGTCATTATG TERM 3071 2232982 - 2232999 + r 75 -8.4 -3.82226 | opp_overlap 2232982, overlap 2232981 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT TERM 3072 2232999 - 2232982 - R 100 -8.4 -5.63517 | opp_overlap 2232982 2232981 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT fliY 2233820 - 2233020 - | cystine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3073 2233184 - 2233198 + g 84 -7.8 -4.63486 | CTTCACCGGTTACTG CCAGCG TAT CGTTGG TTTTCTTCACCAGAT TERM 3074 2233344 - 2233367 + g 79 -2.3 -5.22039 | CAGCCACTCTTCATA GTTGGTGCC CAGACC GACACCCAC TTTTTTGCCTTTCAG fliZ 2234459 - 2233908 - | putative regulator of FliA activity fliA 2235224 - 2234505 - | RNA polymerase, sigma 28 (sigma F) factor TERM 3075 2234619 - 2234642 + g 72 -4.6 -4.59773 | GAGATTCAGCTCTTC CTGGTAATAG AGGG TTAATACCAG TTTTTCGCGCTCCGG TERM 3076 2235181 - 2235169 - G 71 -9.1 -3.49653 | opp_overlap 2235168 2235167 ACCAGCGGGACATAA CGCTG CCA CAGCG AGTGTTTATCCATTA TERM 3077 2235369 - 2235353 - R 100 -15.1 -5.36441 | opp_overlap 2235350 TGCGGACAGAAAAAA CCCCGCC GGT GGCGGGG AAGTACGTTGCTGAC ECUMN_2215 2237208 - 2235544 - | FliC Flagellin TERM 3078 2236740 - 2236756 + g 71 -9.5 -3.53444 | opp_overlap 2236738 TCTTCAGATCAATCG TGATGGT TTC ACCATCA TTTGCGCCGACCTGA fliD 2237474 - 2238880 + | flagellar filament capping protein fliS 2238905 - 2239315 + | flagellar protein potentiates polymerization fliT 2239315 - 2239680 + | putative chaperone for FliD amyA 2239758 - 2241245 + | cytoplasmic alpha-amylase TERM 3079 2241273 - 2241248 - T 77 -11.2 -2.79505 | gap 1, opp_overlap 2241248, overlap 2241247 2241251 AGAGGTGATTTAAAT TCATCCCCGGC GGCAA GCCGGGGA-GA TTTCATTACGGCAGT TERM 3080 2241248 - 2241273 + T 91 -11.2 -3.90291 | gap 1, opp_overlap 2241248 2241247 2241251 AGAGGTGATTTAAAT TCATCCCCGGC GGCAA GCCGGGGA-GA TTTCATTACGGCAGT TERM 3081 2241271 - 2241251 - T 86 -14 -2.66272 | opp_overlap 2241248, overlap 2241248 2241247 GGTGATTTAAATTCA TCCCCGGC GGCAA GCCGGGGA GATTTCATTACGGCA TERM 3082 2241290 - 2241305 + T 71 -8.2 -3.85698 | TTCATTACGGCAGTG GCGTCG GTAA CGGCGC TTTATCCAGCGCGGC yedD 2241692 - 2241279 - | hypothetical protein yedE 2241879 - 2243084 + | conserved hypothetical protein; putative inner membrane protein yedF 2243081 - 2243314 + | hypothetical protein yedK 2243421 - 2244089 + | hypothetical protein yedL 2244200 - 2244595 + | putative acyltransferase ECUMN_2226 2245033 - 2244818 - | hypothetical protein ECUMN_2227 2245932 - 2245129 - | hypothetical protein fliE 2246606 - 2246292 - | flagellar basal-body component TERM 3083 2246418 - 2246432 + g 79 -4.3 -4.88067 | TAACGCCACGCCGGG TTCAC CGAGA GTGAA TTTTTCTGCCTGCGT TERM 3084 2247838 - 2247822 - g 70 -5.7 -4.38472 | overlap 2247823 GGCAAATCAAAATAA CCGCCAG CAG CAGGCGA GCACCACCAGCAATA fliF 2246821 - 2248479 + | flagellar basal-body MS-ring and collar protein fliG 2248472 - 2249467 + | flagellar motor switching and energizing component fliH 2249460 - 2250146 + | flagellar biosynthesis protein TERM 3085 2250348 - 2250376 + G 70 -3.8 -4.72986 | overlap 2250350 ACGAAGTAGAAAGCG AAGTCGTTGGCT TTAAC GGTCAACGGCTG TTTTTAATGCCGCTG TERM 3086 2250479 - 2250462 - g 85 -11.3 -3.63895 | opp_overlap 2250475 2250477 CTGAAGGACTGCAAA GCGGCAA GCAG TTGCCGC TCGGTCCGGCGTTAT TERM 3087 2250741 - 2250765 + G 74 -8.5 -3.95584 | TGATGGCACGTTACA CCCGCGCCGAT GTC ATTGTCGTGGG TTTGATTGGTGAACG fliI 2250146 - 2251519 + | flagellum-specific ATP synthase fliJ 2251538 - 2251981 + | flagellar protein TERM 3088 2252769 - 2252750 - g 76 -7.9 -4.16842 | GCCAGGGGCAACAAA GTGCAGA GTTGCG TCTGCAC CCACAGGATTTAGGT fliK 2251978 - 2253105 + | flagellar hook-length control protein fliL 2253210 - 2253674 + | flagellar biosynthesis protein fliM 2253679 - 2254683 + | flagellar motor switching and energizing component fliN 2254680 - 2255093 + | flagellar motor switching and energizing component fliO 2255096 - 2255461 + | flagellar biosynthesis protein TERM 3089 2255860 - 2255848 - g 70 -4.7 -4.57073 | opp_overlap 2255852, overlap 2255850 GAGGCGCTGGAAAAA GGGGC GCA GCCGC TGCGTGAGTTTATGC fliP 2255461 - 2256198 + | flagellar biosynthesis protein fliQ 2256208 - 2256477 + | flagellar biosynthesis protein TERM 3090 2257172 - 2257198 + G 72 -4.4 -4.58685 | overlap 2257174 CGGTATCTCTTTAAT GGCGGCATTAAT GCC GTTAATTGCGCC TTTTTGCGAACATTT fliR 2256486 - 2257271 + | flagellar export pore protein rcsA 2257561 - 2258184 + | DNA-binding transcriptional activator, co-regulator with RcsB TERM 3091 2258180 - 2258227 + T 80 -10.6 -3.36415 | opp_overlap 2258187 2258189, overlap 2258181 TTTTTGTCAACATGC GCTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATTAGA TTACTCTGCTTTCTC TERM 3092 2258181 - 2258226 + T 87 -14.1 -2.61126 | opp_overlap 2258187 2258189, overlap 2258180 TTTTGTCAACATGCG CTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATTAG ATTACTCTGCTTTCT TERM 3093 2258220 - 2258187 - T 87 -13.9 -3.04248 | opp_overlap 2258181 2258180, overlap 2258189 CAACATGCGCTAACA CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG AATTAGATTACTCTG TERM 3094 2258218 - 2258189 - T 76 -10.7 -3.07522 | opp_overlap 2258181 2258180, overlap 2258187 ACATGCGCTAACACA TTCTGACTGGTGG TTTC CCACCAGTCAGGC TGAATTAGATTACTC dsrB 2258416 - 2258228 - | hypothetical protein yodD 2258579 - 2258806 + | hypothetical protein TERM 3095 2258845 - 2258823 - f 100 -14.9 -6.09196 | opp_overlap 2258818 TGCAAAATAAAAAAA TCCCGACCC TGAGG GGGTCGGGA TGAAACTTGCTTAAG TERM 3096 2259055 - 2259043 - f 70 -2.7 -5.00616 | TCGCTCCCGAAAAAA TCATC TTT GATAA TTTGTGCTGTTTTAA yedP 2259104 - 2259919 + | putative mannosyl-3-phosphoglycerate phosphatase (mngB-like) yedQ 2261610 - 2259916 - | putative diguanylate cyclase ECUMN_2248 2261719 - 2261531 - | hypothetical protein TERM 3097 2261738 - 2261766 + r 100 -17.5 -3.21925 | opp_overlap 2261743, overlap 2261740 TTGCAGGCATTGGCA CACCAGGCCGGAT GTG ATCCGGCCTGGTC TTAATGATACCCTGT TERM 3098 2261740 - 2261764 + r 100 -20.1 -3.17229 | opp_overlap 2261743, overlap 2261738 GCAGGCATTGGCACA CCAGGCCGGAT GTG ATCCGGCCTGG TCTTAATGATACCCT TERM 3099 2261761 - 2261743 - R 89 -14.6 -2.62983 | opp_overlap 2261740 2261738 GGCATTGGCACACCA GGCCGGAT GTG ATCCGGCC TGGTCTTAATGATAC yodC 2261963 - 2261781 - | hypothetical protein yedI 2262959 - 2262042 - | conserved hypothetical protein; putative inner membrane protein yedA 2263132 - 2264052 + | conserved hypothetical protein; putative inner membrane protein vsr 2264511 - 2264041 - | DNA mismatch endonuclease of very short patch repair dcm 2265910 - 2264492 - | DNA cytosine methylase TERM 3100 2265939 - 2265919 - R 91 -13.3 -3.15999 | CCTGCATAGATTTAA CCGGCCATC TGA GATGGCCGA CAGGTTAACATAATT yedJ 2266672 - 2265977 - | putative metal-dependent phosphohydrolase yedR 2267077 - 2266712 - | conserved hypothetical protein; putative inner membrane protein TERM 3101 2267053 - 2267068 + g 70 -4 -4.62471 | GACTTAGTACTATTA TGTGAT AAAA GTCACA TTTTTCCACATTGGA TERM 3102 2267158 - 2267170 + H 76 -4.1 -5.13648 | overlap 2267153 TGAGTACAGGAAAAA TCGTT TTG AGCGA TTTTATTTATCTTTG TERM 3103 2267308 - 2267324 + H 100 -13.7 -5.66684 | GTTTATATTTTTTGG GCCGGCA TGA TGCCGGC TTTTTTTATGCCTTC TERM 3104 2268744 - 2268706 - g 72 -6.9 -4.16909 | gap 1 ACTTCAACAAAAACA TGTCCACCTATGTTGATT ACAA AATCAACCT-GCTGGACA ACGACGACGACTTCT ECUMN_2256 2267613 - 2268821 + | Porin OmpN TERM 3105 2268896 - 2268863 - f 85 -11.1 -3.81879 | opp_overlap 2268865, overlap 2268855 2268865 TGTAAAACTTAAGAA TAGCCTGAGTTCG TCCCTCAT CGAACTCAGGCTT TTTTATTGGCATTTC TERM 3106 2268865 - 2268894 + F 100 -13.7 -5.4756 | opp_overlap 2268863 2268855 2268865 TAAAACTTAAGAATA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT TERM 3107 2268894 - 2268865 - f 100 -13.7 -3.48479 | opp_overlap 2268865, overlap 2268863 2268855 TAAAACTTAAGAATA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT hchA 2269413 - 2270264 + | Hsp31 molecular chaperone TERM 3108 2270300 - 2270332 + T 93 -9.2 -5.055 | gap 1, opp_overlap 2270300 AAGCGCATAATCAAT CGCAGCTGCGTTAGT ACTC AC-GACGTGGCTGCG TTTTTTCACGGTTAA yedV 2271730 - 2270372 - | sensory kinase in two-component regulatory system with YedW yedW 2272401 - 2271730 - | DNA-binding response regulator in two-component system with YedV yedX 2272534 - 2272947 + | hypothetical protein TERM 3109 2272976 - 2272965 - f 76 -5.8 -4.76423 | opp_overlap 2272965 CATAAATATATAAAA GCAG ATCT CTGC TACTGTTAGGGAGGT yedY 2273056 - 2274060 + | exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export yedZ 2274061 - 2274696 + | heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit yodA 2274953 - 2275603 + | conserved hypothetical protein; putative metal-binding protein TERM 3110 2275717 - 2275693 - f 70 -9.4 -2.87146 | gap 1, opp_overlap 2275693, overlap 2275690 AATAAAACAAACTCA GACACG-CTCA TGCT TGAGACGTGTC TTTTTTATTATGTCT TERM 3111 2275693 - 2275717 + F 100 -9.4 -5.62045 | gap 1, opp_overlap 2275690 2275693 AATAAAACAAACTCA GACACG-CTCA TGCT TGAGACGTGTC TTTTTTATTATGTCT yeeI 2276457 - 2277254 + | hypothetical protein TERM 3112 2278439 - 2278427 - g 72 -5.5 -4.56597 | opp_overlap 2278427, overlap 2278429 GCCGCGGGGCAAAAA TGCGA ATG CCGCA TATCGTCCCCCTCTC int 2277592 - 2278854 + | integrase TERM 3113 2278913 - 2278885 - T 71 -10.3 -2.72829 | opp_overlap 2278890, overlap 2278884 2278887 CACACTCTGGCAAAT TACCACCACCTCC ACA GGAGGTGGTTCTA TATAGACTTTTATCA TERM 3114 2278908 - 2278887 - T 72 -10.1 -2.90813 | opp_overlap 2278890, overlap 2278885 2278884 CACTCTGGCAAATTA CCACCACCT CCAC AGGAGGTGG TTCTATATAGACTTT TERM 3115 2278890 - 2278908 + T 100 -14.6 -3.60814 | opp_overlap 2278887 2278885 2278884 TCTGGCAAATTACCA CCACCTCC ACA GGAGGTGG TTCTATATAGACTTT irp 2280352 - 2279048 - | Salicylate synthase irp 2281783 - 2280380 - | putative permease of yersiniabactin-iron transporter YbtX irp 2283482 - 2281653 - | permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQ TERM 3116 2282837 - 2282868 + gr 72 -10.1 -2.91593 | overlap 2282837 2282840 CAACGATATCGCCGC TCAGACGCTGGTG CGCTTC CCCCAGCGTCTGC ATTTGTCGCCGCATC TERM 3117 2282837 - 2282869 + gr 76 -8.5 -3.86346 | gap 1, overlap 2282837 2282840 CAACGATATCGCCGC T-CAGACGCTGGTG CGCTTC CCCCAGCGTCTGCA TTTGTCGCCGCATCG TERM 3118 2282840 - 2282865 + gr 71 -10.4 -2.70354 | overlap 2282837 2282837 CGATATCGCCGCTCA GACGCTGGTG CGCTTC CCCCAGCGTC TGCATTTGTCGCCGC TERM 3119 2283380 - 2283345 - GR 91 -13.4 -3.14881 | gap 1 GAATGCCGCCAGCAA CAGCGCCAGCATACTGC GTC GCAGCATCCTGGC-CTG ACTGCCAACGCTGGA irp 2285244 - 2283442 - | permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtP TERM 3120 2285119 - 2285109 - GH 75 -4.6 -4.85599 | TCCACGCCAGAAAAA GGAG CGC CCCC AGGCTGGTTAATGCC ybtA 2285411 - 2286370 + | AraC type regulator of yersiniabactin gene cluster (HPI) TERM 3121 2286403 - 2286433 + F 100 -21.3 -3.93658 | opp_overlap 2286407 TAAACTCCTCCCTGA CAGAGGCCCGGAT ACCCC ATCCGGGCCTCTG TTCTTTCCGCCTGTT TERM 3122 2286429 - 2286407 - f 93 -15.6 -2.87132 | opp_overlap 2286403 CTCCTCCCTGACAGA GGCCCGGATA CCC CATCCGGGCC TCTGTTCTTTCCGCC TERM 3123 2286485 - 2286454 - f 100 -15.2 -3.14132 | opp_overlap 2286445, overlap 2286461 2286475 TCCGCCTGTTACCAA CCCGAAACGGGCAT AAAT AAACCCGTTTCGGG TAGCATCCAATTGTT TERM 3124 2286485 - 2286475 - f 82 -8.2 -4.55697 | opp_overlap 2286445, overlap 2286461 2286454 ACGGGCATAAATAAA CCCG TTT CGGG TAGCATCCAATTGTT TERM 3125 2287708 - 2287743 + G 70 -10.5 -2.72379 | gap 2 TTAACATCACCTTAT TCGACCGCCAGCCGCTG CACC CGGCGGTTGGCG--CGA TGCTTGCCGACTTCA TERM 3126 2288379 - 2288360 - g 70 -10.7 -2.69799 | opp_overlap 2288358, overlap 2288357 TGAGCTGACAGACTA TGCCCGC CGTTGC GCGGGCA GGTTAATCGAGTGCG TERM 3127 2288464 - 2288484 + G 72 -8.2 -3.77241 | overlap 2288476 TTGTTGCGGTTCTGG CCGTCCTG CTGGC CGGGGCGG TTTACGTTCCGGTTT TERM 3128 2289264 - 2289246 - g 70 -10.2 -3.14132 | CGGGTGGTGGATGAA CAGGGCCG GGA CTGCCCTG ACTGGGTGCCGGGTG TERM 3129 2290822 - 2290794 - g 77 -6 -4.70659 | gap 1, opp_overlap 2290796 2290797, overlap 2290796 2290797 GGCGACATTGAAAAA CAG-GTTGCCGCC CTCT GGCAGCAACTCTT ATCAACTGGCAATGT TERM 3130 2290819 - 2290796 - g 74 -8.8 -3.96999 | opp_overlap 2290796 2290797, overlap 2290794 2290797 CGACATTGAAAAACA GGTTGCCGCC CTCT GGCAGCAACT CTTATCAACTGGCAA TERM 3131 2290818 - 2290797 - g 78 -12.3 -2.97476 | opp_overlap 2290796 2290797, overlap 2290796 2290794 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 3132 2290797 - 2290818 + G 70 -10.1 -3.23393 | opp_overlap 2290797 2290796 2290794, overlap 2290796 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 3133 2291731 - 2291715 - g 86 -7.2 -5.0133 | opp_overlap 2291716 2291719, overlap 2291716 CATCGGCTGAAAAAA CGGGCG GCTGA CGCCCA TCTCACCCCGTCGGC TERM 3134 2291739 - 2291772 + G 73 -9.5 -3.60525 | overlap 2291719 2291716 GACGCCCATCTCACC CCGTCGGCCGTACTG TTGT CGGTGTGGTCAACGG TTCTCTCTGCATGGA TERM 3135 2292297 - 2292280 - g 72 -8.3 -3.78775 | TGGCCGAGGATGAAA GCGGCTG GCAA CTGCCGC TCGCCGCGCTGGTGC TERM 3136 2292368 - 2292326 - g 76 -10.5 -3.34398 | gap 1, overlap 2292324 GCCTCCCGTTAAACA CGCAGGGCA-ATGCGCAGAG CGCT CACCGCGCGTATGCCCTGAG CACTCTCAGCCACAC irp 2286543 - 2292668 + | High-molecular-weight nonribosomal peptide/polyketide synthetase 2 (HMWP2) TERM 3137 2292691 - 2292721 + F 76 -10.5 -3.33711 | gap 1, overlap 2292686 CAAACTGATTTTCCC CGGAACGCCATCGC GAAC GC-ATGGCGTTCCA TTGACTTTGTGAATC TERM 3138 2293680 - 2293640 - gf 82 -12.5 -2.93073 | overlap 2293648 2293652 CGCGGTCAACAACGA CGGCAACAGAAAGGTCGGC TAT ACCGCCCCTTCCGTCGCAG GGCAACAGGCAGTCA TERM 3139 2294196 - 2294155 - gf 90 -7.9 -4.84761 | gap 1, opp_overlap 2294162 2294163, overlap 2294158 2294159 ATAGCGGCAGAAAAA GTACCGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCGTTGC GGCGGCTGGCGACGG TERM 3140 2294192 - 2294159 - gf 79 -11.7 -2.58667 | gap 1, opp_overlap 2294162 2294163, overlap 2294158 2294155 CGGCAGAAAAAGTAC CGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCG TTGCGGCGGCTGGCG TERM 3141 2294352 - 2294326 - gf 100 -13.6 -3.64682 | CATTAAACCGTGAAA CCGCCGAGGCGC TCA GCGCCTGGGCCG GTGAGAAATCGGGGG TERM 3142 2295177 - 2295189 + GF 75 -4.7 -4.84359 | CAGGTGGCGCATCAG CTCGG CGC CCGCG TTTTTCTGGAGATGG TERM 3143 2297526 - 2297496 - gf 74 -3.2 -4.96848 | gap 1, overlap 2297497 2297498 TGGCTCAGAGAAAAA GGGGCGCGACGCA TCGCCC TGC-TGGCGCCGC GCGTGGATGAGTCAT TERM 3144 2297563 - 2297580 + GF 77 -11.3 -2.67747 | overlap 2297562 GCGACGTGGAGGGCG GGCAGAC GCGC GTCTGCC GTTGTGATGTGGGCG TERM 3145 2297714 - 2297757 + GF 71 -9.6 -3.02144 | gap 1 GCTTGATGACCACCA GTTGGC-TGCCGTTTTCGC GGTAAAA GCGCAGGCGGCAAGCCAGC TGTTGCAAACCCTGC TERM 3146 2297991 - 2297971 - gf 81 -11.1 -3.55444 | overlap 2297972 CGGCCACGCCGGAAA TGCTGGCGA CGC TCGCCAGCC GAGGTATGGGCGCGT TERM 3147 2297990 - 2297972 - gf 90 -14.6 -2.73124 | overlap 2297971 GGCCACGCCGGAAAT GCTGGCGA CGC TCGCCAGC CGAGGTATGGGCGCG TERM 3148 2298154 - 2298144 - gf 71 -2.4 -4.9725 | overlap 2298130 AGCGCCACAGAAAAA GCCG CAA CGCC GGTCATTCCTCCTGC TERM 3149 2298785 - 2298771 - gf 87 -11.4 -3.61398 | CTTTCCCCGGAAGAA CAGCGC ATC GCGCTG GAAAAACGGCGGCAT TERM 3150 2301964 - 2301944 - gf 74 -7.5 -4.07885 | overlap 2301945 TATGGTGCCGCAAAA CCTGACGCT GCA AGCGGCAGA AACGTGGCTCGACAA irp 2292756 - 2302247 + | High-molecular-weight nonribosomal peptide/polyketide synthetase 1 (HMWP1) TERM 3151 2302742 - 2302752 + GF 72 -5.4 -4.48713 | CGACAGTTGCTCTAC TCCA CTC TGGA TTTGTTGTTGCTGGC TERM 3152 2303299 - 2303310 + GF 70 -7.2 -3.86346 | GCCGCCGCACCACGA CCGG TTAG CCGG TTTCTACAACGATGA irp 2302184 - 2303344 + | Thiazolinyl-S-HMWP1 reductase YbtU irp 2303341 - 2304144 + | putative thioesterase YbtT TERM 3153 2305083 - 2305093 + G 72 -6.8 -4.2349 | overlap 2305090 CACCTTTGACTGTAC CCTG CAA CAGG TTTTCGGTATGGCGG TERM 3154 2305703 - 2305678 - g 100 -6.7 -5.46276 | opp_overlap 2305678, overlap 2305679 AAGATAGACAAAAAA CGCCTGACGGC TCTC GCCGTCGACCG TTATCGCCATTCTGC irp 2304148 - 2305725 + | salicyl-AMP ligase YbtE TERM 3155 2305772 - 2305733 - f 91 -11.5 -3.72051 | overlap 2305734 2305737 2305758 CCCAATAAGCGCAAA CCGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAGC ACCACTATTAGAAAT TERM 3156 2305771 - 2305734 - f 89 -15 -2.82749 | overlap 2305733 2305737 2305758 CCAATAAGCGCAAAC CGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAG CACCACTATTAGAAA TERM 3157 2305768 - 2305737 - f 93 -15.3 -2.66593 | overlap 2305734 2305733 2305758 ATAAGCGCAAACCGA CCCGAAACAGGTT GAAATA AACCCGTTTCGGG TAGCACCACTATTAG TERM 3158 2305768 - 2305758 - f 79 -8.2 -4.43208 | overlap 2305737 2305734 2305733 ACAGGTTGAAATAAA CCCG TTT CGGG TAGCACCACTATTAG TERM 3159 2306057 - 2306038 - g 76 -12.8 -2.60244 | overlap 2306034 GCCGGAATTAAGCGA CGCCGGCG TCAC CGCCAGCG ACAAACTCCCCAGAG TERM 3160 2307328 - 2307349 + G 70 -5.1 -4.36914 | gap 1 CTACGAAACCGCTGA CGTCAC-GCT GCA AGCCGCGACG TTTTATACCCACACC fyuA 2305856 - 2307877 + | Yersiniabactin/pesticin outer membrane receptor (IRPC) TERM 3161 2307909 - 2307889 - f 93 -11.2 -4.15565 | opp_overlap 2307889 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 3162 2307889 - 2307909 + F 91 -11.2 -4.08945 | opp_overlap 2307889 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 3163 2308777 - 2308760 - g 85 -2.7 -5.44721 | ATTATGTCAAAAAAA TATCAGC CATT GCTTATA ACTCATTATATGTCA TERM 3164 2309455 - 2309442 - g 100 -3.8 -5.72616 | opp_overlap 2309442 ATTTATACAAAAAAA GGGA GAGTCA TCCC ATTTCACCTTCCCGT ECUMN_2279 2308691 - 2309674 + | hypothetical protein TERM 3165 2309736 - 2309703 - f 100 -15.5 -3.31322 | opp_overlap 2309695 2309703 2309710, overlap 2309710 2309713 TGTAATGGCCGACAA CCCTAAATAAGGGTT TTGC ATCCCTTATTTAGGG CTCACCAGCTTTCTC ECUMN_2280 2310018 - 2310203 + | hypothetical protein ECUMN_2281 2310188 - 2310769 + | hypothetical protein ECUMN_2282 2310759 - 2310968 + | putative lambdoid prophage protein from the DksA/TraR family with a zinc finger TERM 3166 2310976 - 2311001 + F 87 -10.5 -4.34402 | GACGTTAAATCTGTA TGTGCGGAG GAGAATAG CTCCGCACA TTTTAATATGCACCA TERM 3167 2311238 - 2311222 - g 72 -4.4 -4.70169 | GCATATGGAAGAAAA GCTCAC AGGGA ATGAGC TTGAAATGCTTTATG ECUMN_2283 2311211 - 2311339 + | hypothetical protein TERM 3168 2312019 - 2311976 - f 91 -10.5 -4.84359 | TCAGGGTGAGAAAAA TACC-TGGTGGACAAAGGTCG GAGT CG-CCTTTCCCCACCACGGTA AATCCGGTCTGAATA TERM 3169 2312260 - 2312308 + G 72 -6.6 -4.1585 | gap 1 CCATGCAGTGCGCCG CCAGCATTCATCCGT-CCACGGC ATTC GACGTGGCACGGGTGGAATCCGG TTTTAACCCTTATGC ECUMN_2284 2312196 - 2312924 + | putative type IV secretory pathway VirB1 component ECUMN_2285 2312924 - 2313217 + | putative type IV secretory pathway VirB2 component TERM 3170 2314030 - 2313993 - g 93 -6.1 -5.27335 | opp_overlap 2314000 2314023 2314024, overlap 2313994 TGCTGGAAATAAAAA GCACGCTCGATACCGCG CTGT CGCGCTATGGTGCGCGG CCTCTCGGTACGTTT TERM 3171 2314029 - 2313994 - g 76 -9.6 -3.75678 | opp_overlap 2314000 2314023 2314024, overlap 2313993 GCTGGAAATAAAAAG CACGCTCGATACCGCG CTGT CGCGCTATGGTGCGCG GCCTCTCGGTACGTT TERM 3172 2314135 - 2314117 - g 74 -10.2 -3.56092 | GCACCAGTGGCGAAA GGTGCGCG TCA CCCGCACC CCGGCCTATGACGTG TERM 3173 2315762 - 2315744 - g 74 -10.3 -3.54424 | TTCGACGTGGTGAAA GGGCTTG ACCCG CAAGCCC GCCAGTATGTTGTGG ECUMN_2286 2313230 - 2315968 + | putative type IV secretory pathway VirB4 component ECUMN_2287 2315987 - 2316700 + | putative type IV secretory pathway VirB5 component ECUMN_2288 2316708 - 2316950 + | conserved hypothetical protein; putative exported protein ECUMN_2289 2316954 - 2317298 + | Type IV secretory pathway VirB6 component (fragment) insH 2318352 - 2317336 - | IS5 transposase and trans-activator; CP4-44 prophage TERM 3174 2318940 - 2318915 - gH 70 -6.7 -4.07885 | TATCTCTCCGCAAAA CTGGCCGCAGC ACTG GCCGGGGCGAG TGCTACCGTATCCAT ECUMN_2291 2318315 - 2319226 + | Type IV secretory pathway VirB6 component (fragment) TERM 3175 2319261 - 2319286 + FH 93 -9.3 -4.90013 | opp_overlap 2319263 CCCAAAGTGCCAACT TATGAAAATAT AATT ATATTTTCATA TTTTTAATTCAATTG ECUMN_2292 2319444 - 2320127 + | putative type IV secretory pathway VirB8 component ECUMN_2293 2320124 - 2321032 + | putative type IV secretory pathway VirB9 component TERM 3176 2321034 - 2321045 + F 70 -3 -5.02287 | opp_overlap 2321033, overlap 2321035 CGGAATCCAATTAAT CTAT AAAA ATAG TTTTATATTTTTATA TERM 3177 2321035 - 2321052 + F 73 -4.3 -4.82901 | opp_overlap 2321033 2321046, overlap 2321034 GGAATCCAATTAATC TATAAAA ATAG TTTTATA TTTTTATAAAAGGAA TERM 3178 2321136 - 2321094 - g 75 -4.7 -4.74518 | gap 1, opp_overlap 2321118 2321121, overlap 2321095 2321096 AACGACGAAAACAAA GTGCCTGTGCCGGATGAAGC GCAG GCATC-CCCGGCACACGCTG AGGATGATATTGCCA TERM 3179 2321134 - 2321096 - g 73 -11.7 -2.64766 | gap 1, opp_overlap 2321118 2321121, overlap 2321095 2321094 CGACGAAAACAAAGT GCCTGTGCCGGATGAAGC GCAG GCATC-CCCGGCACACGC TGAGGATGATATTGC TERM 3180 2321390 - 2321376 - g 80 -5.6 -4.88795 | overlap 2321383 ACGGAAGAAAAGAAA CAGGAC ACA GCCCCG CAGACGAACAAAACC TERM 3181 2321414 - 2321404 - g 75 -4.6 -4.75472 | opp_overlap 2321411 CGCAGACGAACAAAA CCGA TTA CCGG CAGCGTAACGATCTC TERM 3182 2321601 - 2321590 - g 70 -3.6 -4.71382 | overlap 2321579 AGAACCAGGTAAAAA CCCG GCAG CAGG AAATGACGCTGACAT TERM 3183 2321726 - 2321678 - g 70 -6.7 -4.11216 | gap 1, overlap 2321647 2321680 2321681 2321683 CGGCCAGCCGCAAAA TAC-CACCGCACCGTCGCAGGG ACAAAG CCCCGCACCAGTACGGCGCATA CCCTATAACCCTGAC TERM 3184 2321722 - 2321681 - g 77 -12.2 -2.79004 | overlap 2321647 2321680 2321678 2321683 CCAGCCGCAAAATAC CACCGCACCGTCGCAGGG ACAAAG CCCCGCACCAGTACGGCG CATACCCTATAACCC TERM 3185 2321720 - 2321683 - g 71 -11.2 -2.93891 | overlap 2321647 2321681 2321680 2321678 AGCCGCAAAATACCA CCGCACCGTCGCAGGG ACAAAG CCCCGCACCAGTACGG CGCATACCCTATAAC TERM 3186 2322164 - 2322150 - g 77 -3.4 -5.09225 | overlap 2322152 AGCGCAGGTAAAAAA GACCGC AAT ACGGAC TATACGGAAAACAGT ECUMN_2294 2321070 - 2322338 + | putative type IV secretory pathway VirB10 component TERM 3187 2322476 - 2322446 - g 71 -2.4 -4.98522 | opp_overlap 2322446 2322450, overlap 2322450 AACTGTACACAAAAA TCAACGGCGTGTGG GAG CAACATGCCGTTCC TTTGAACTATGAGGA TERM 3188 2322450 - 2322472 + G 74 -9.8 -3.53745 | opp_overlap 2322446 2322450, overlap 2322446 GTACACAAAAATCAA CGGCGTGTGG GAG CAACATGCCG TTCCTTTGAACTATG TERM 3189 2322472 - 2322450 - g 72 -7.6 -3.91281 | opp_overlap 2322450 2322446, overlap 2322446 GTACACAAAAATCAA CGGCGTGTGG GAG CAACATGCCG TTCCTTTGAACTATG TERM 3190 2322665 - 2322693 + G 78 -7.4 -4.3739 | opp_overlap 2322665 2322666, overlap 2322666 CATCAAAGGTACAAA TCCCGCATCAGT CATAT ATCGATGCGGGG TTTTATAACCGGGTA ECUMN_2295 2322328 - 2323353 + | putative type IV secretory pathway VirB11 component ECUMN_2297 2323789 - 2324091 + | kikA from plasmid origin; putative exported protein TERM 3191 2324229 - 2324247 + G 74 -11 -3.18386 | opp_overlap 2324229, overlap 2324227 2324225 ACGTTATCTAAAGAA GCCCACAG TGG TTGTGGGC TGTATTATGAGATAT TERM 3192 2324247 - 2324229 - g 81 -10.3 -3.96483 | opp_overlap 2324227 2324225 2324229 ACGTTATCTAAAGAA GCCCACA GTGGT TGTGGGC TGTATTATGAGATAT ECUMN_2298 2324136 - 2324441 + | hypothetical protein TERM 3193 2324473 - 2324458 - f 76 -2.6 -5.27206 | CACACAGAACAAAAA TGTATT GTGC AACACA CAGGCTGACAGGCGG TERM 3194 2324710 - 2324695 - f 80 -10.4 -3.73647 | opp_overlap 2324694 2324693 2324695 CCCAGCGAGCAATAA GGCACG CCCA CGTGCC GGTTTTTGTGGGGGG TERM 3195 2324695 - 2324710 + F 71 -10.4 -2.6933 | opp_overlap 2324695, overlap 2324694 2324693 CCCAGCGAGCAATAA GGCACG CCCA CGTGCC GGTTTTTGTGGGGGG TERM 3196 2325033 - 2325051 + F 72 -10.2 -2.94708 | overlap 2325032 CATGCTTTCCTGCAC ATGGCCGC ACA GCGGCCAC CTTCTTTACCCCATA TERM 3197 2325069 - 2325118 + F 100 -13.5 -3.33492 | gap 1, overlap 2325070 TCTTTACCCCATACG C-TCGCCCCGCCTTTTCGCCCGAC ACC GTGGGGCGAATTGATGGGGCGATG TTATGGGGTGAATAG TERM 3198 2325070 - 2325116 + F 100 -17.2 -3.23572 | overlap 2325069 CTTTACCCCATACGC TCGCCCCGCCTTTTCGCCCGAC ACC GTGGGGCGAATTGATGGGGCGA TGTTATGGGGTGAAT TERM 3199 2325242 - 2325270 + G 81 -4.5 -5.09895 | opp_overlap 2325232, overlap 2325243 AGCAACAACTGGTGC TGGCGTTATTAGC GGG GCTGACGATGCCG TTTTTTGCGTCGATG TERM 3200 2325467 - 2325478 + G 74 -3 -4.90906 | GGATTGCATTCACTG TAAC CGGG GTTA TTTTTCATATTATGC TERM 3201 2326900 - 2326930 + G 70 -3.8 -4.63218 | opp_overlap 2326894, overlap 2326902 GATGATAAACCAGCC ATGCCGGATGTGAT GAC AACCCATCCGGCTC TTTTCTTCGACGAAA TERM 3202 2326902 - 2326928 + G 86 -10.8 -3.93367 | opp_overlap 2326894, overlap 2326900 TGATAAACCAGCCAT GCCGGATGTGAT GAC AACCCATCCGGC TCTTTTCTTCGACGA ECUMN_2299 2325151 - 2327010 + | putative MobB mobilization protein ECUMN_2300 2327014 - 2327766 + | putative MobC mobilization protein TERM 3203 2327794 - 2327828 + T 100 -17.1 -5.46657 | overlap 2327796 GCCATCGTGATGGCC TCACCGGCCTGGCGG CGATA CCGCCAGGCCGGAAA TTTTTTATTCCACTG TERM 3204 2327796 - 2327826 + T 100 -19.7 -2.91061 | overlap 2327794 CATCGTGATGGCCTC ACCGGCCTGGCGG CGATA CCGCCAGGCCGGA AATTTTTTATTCCAC ECUMN_2301 2329098 - 2327959 - | putative Antirestriction protein ardC TERM 3205 2328972 - 2329021 + g 73 -9.4 -3.65812 | gap 2, opp_overlap 2328984, overlap 2328973 CTTTCCCGGCATCGT TCCGTCCAGCAAGGGCGCA--GCA TGCG TGCCATTTACCCTTGCTGGACGGG TTGTGTTGGGAAACG TERM 3206 2328973 - 2329020 + g 70 -10.7 -2.79273 | gap 2, opp_overlap 2328984, overlap 2328972 TTTCCCGGCATCGTT CCGTCCAGCAAGGGCGCA--GCA TGCG TGCCATTTACCCTTGCTGGACGG GTTGTGTTGGGAAAC TERM 3207 2329100 - 2329085 - G 90 -7.6 -4.79826 | overlap 2329073 ACACAGGAGGAAAAA CTATGC CCCT GCATAG CCGGACTTAGCGCCC ECUMN_2302 2329140 - 2329373 + | hypothetical protein TERM 3208 2329417 - 2329431 + F 74 -4.2 -4.95302 | TTTGGAATACCGACT GTATGC GCT GCTTAC TTTTATTGTATTTGA ECUMN_2303 2329496 - 2329807 + | hypothetical protein ECUMN_2304 2329909 - 2330904 + | conserved hypothetical protein; putative Restriction endonuclease; putqtive coiled-coil ECUMN_2305 2330901 - 2331989 + | hypothetical protein ECUMN_2306 2331974 - 2332480 + | hypothetical protein ECUMN_2307 2332477 - 2334357 + | conserved hypothetical protein; putative ATPase involved in DNA repair; putative coiled-coil protein TERM 3209 2334585 - 2334556 - T 77 -2 -5.40072 | opp_overlap 2334556 GTGGCTTTAAAAAAA CTGGGCGATG TTGTGATTCG CCGCGCCCAG TTTCAATCTCCGTAG ECUMN_2308 2335660 - 2334641 - | hypothetical protein TERM 3210 2334998 - 2334977 - G 72 -6.6 -4.15044 | gap 1, overlap 2334979 TCCTTCGCTAACAAA CAGCG-GCA CCGCT TGCTCGCTG CGCCACTCTTCAAGA ECUMN_2309 2335829 - 2335692 - | hypothetical protein TERM 3211 2336692 - 2336704 + H 81 -6.3 -4.94243 | opp_overlap 2336691 2336692 TAATAATAAAAAACT CTTCA CTT TGAAG TTTTGCTTTTTTTAG TERM 3212 2337706 - 2337683 - g 79 -2.5 -5.31275 | GGCGACTACAAAAAA TACATCACT CGCATT ACTGATGTA ATTGACACAAAACCA TERM 3213 2339155 - 2339166 + G 93 -5.8 -5.2696 | CACAAAAACTAGTGG CTGG GTTA CCAG TTTTTTGGATTTTAC ECUMN_2310 2337029 - 2339305 + | hypothetical protein TERM 3214 2339726 - 2339738 + G 70 -6.3 -4.17987 | opp_overlap 2339716 2339726 2339725, overlap 2339716 CAAAATGTCAAATAT TGTCA TCT TGACA TTGTTTCATTCTTTC ECUMN_2312 2339420 - 2340520 + | putative Retron-type reverse transcriptase TERM 3215 2340605 - 2340586 - T 76 -10.8 -3.08206 | opp_overlap 2340584 2340583, overlap 2340583 2340596 TACCATAAACAATCA GCCACAAT GATC ATTGTGGC CATGATGTTAGTAAT TERM 3216 2340667 - 2340648 - T 70 -10 -2.58714 | overlap 2340644 TTTTATATCAATTTA GCTCCGTG AATT CACAGAGC AATACATCCACGTGA TERM 3217 2340839 - 2340804 - T 79 -12 -2.66272 | opp_overlap 2340809, overlap 2340809 GGGGAGCCAAATTTA GAAAATCCCGCTTAAG GAAA CTTACGCGGGATTTTT GTTATTAATCAACTG TERM 3218 2340809 - 2340834 + T 100 -11.9 -5.31855 | opp_overlap 2340804 2340809 GCCAAATTTAGAAAA TCCCGCTTAAG GAAA CTTACGCGGGA TTTTTGTTATTAATC TERM 3219 2340834 - 2340809 - T 100 -11.9 -4.51196 | opp_overlap 2340809, overlap 2340804 GCCAAATTTAGAAAA TCCCGCTTAAG GAAA CTTACGCGGGA TTTTTGTTATTAATC TERM 3220 2341110 - 2341091 - T 77 -2.2 -5.41143 | gap 1 CAGTTGCTAAAAAAA GTTCACCAT TTT ATGG-AAAC CGCCAGCCCGTTTTC TERM 3221 2341145 - 2341180 + T 76 -2.5 -5.23292 | opp_overlap 2341111 2341110 GGTCAACATGGGCTG GCAAAAGAGTAGCGT TATTCC GCGCAACTATTTAGC TTTTATTTTCTCTAA ECUMN_2313 2341670 - 2341176 - | hypothetical protein ECUMN_2314 2342320 - 2342042 - | hypothetical protein TERM 3222 2342352 - 2342324 - R 71 -10.5 -2.7438 | overlap 2342323 2342321 2342326 TACTAAGAACAAGAC TACGATGAAAAAT CAA ATTTTACATCGTA CCGATGATAGCAATG ECUMN_2315 2342571 - 2342428 - | hypothetical protein ECUMN_2316 2342945 - 2342466 - | conserved hypothetical protein, putative transposase TERM 3223 2343251 - 2343277 + H 100 -15.9 -4.34402 | overlap 2343266 TTTTGACATCTTAAG CGCCCTCGACC TTTAT GGTTGAGGGCG TTTTGCTATGGACGC TERM 3224 2348366 - 2348339 - g 77 -11.4 -3.20573 | gap 1, overlap 2348337 TCACTTATACCAATA CCCGCTCCTCGAT AGA ATC-AGGAGCGAG ACCAGATACCGTTGA TERM 3225 2350403 - 2350391 - g 77 -6.9 -4.56775 | ACTTCGCCTTAAAAA GCGGC TCT GCCAC ATTAACGACATTAAC ECUMN_2317 2343400 - 2351457 + | putative invasin TERM 3226 2351501 - 2351480 - T 78 -10.1 -3.58533 | opp_overlap 2351480 CTATAATTCCTTAAA GAGTGCTCC ATTC GGGGCACTC TTTTTTACATTCCCT TERM 3227 2351480 - 2351501 + T 100 -12.3 -5.16572 | opp_overlap 2351480 CTATAATTCCTTAAA GAGTGCTCC ATTC GGGGCACTC TTTTTTACATTCCCT ECUMN_2318 2352771 - 2351719 - | hypothetical protein TERM 3228 2352061 - 2352071 + g 76 -4 -4.88228 | TATTGGCATATCTGT TTCA CTT TGAA TTTTTGCTATTAGAT TERM 3229 2354262 - 2354275 + G 70 -3.8 -4.64676 | GCCAGTGTGGTTGGC GGTG GATTTA CACC TTTTATTGCCGCTGC TERM 3230 2354321 - 2354331 + G 72 -5.4 -4.50627 | TGCCGGGAACTGGCA TAGC GTC GCTA TTTATTTGCTGGCTG shiA 2353086 - 2354402 + | shikimate transporter TERM 3231 2355024 - 2355042 + G 84 -7.4 -4.65895 | overlap 2355026 CCCCGCTATCGCATT TTGATGCG CGC CGCGTCGA TTTTTCCCTCGCGCG TERM 3232 2355282 - 2355294 + G 72 -7.7 -3.90112 | opp_overlap 2355280 2355278 2355277 2355282 GGAAAAAACACCAGA TGCCA GCA TGGCA TTTAATTACCGCCGA TERM 3233 2355817 - 2355831 + G 73 -4.2 -4.82901 | TGAGATTAAACTTCC CGGTCA GGC TAACCG TTTTTATGAAGGCGC amn 2354504 - 2355958 + | AMP nucleosidase TERM 3234 2356014 - 2356045 + F 100 -15.3 -3.14344 | opp_overlap 2356019 2356021, overlap 2356019 2356021 TTAGTAAGTCATCCA GCAAATAGCCTGC AATAAA GCAGGCTGTTTGC TTCCTGGGGCGGATA TERM 3235 2356019 - 2356040 + F 72 -8 -3.95584 | opp_overlap 2356019 2356021, overlap 2356014 2356021 AAGTCATCCAGCAAA TAGCCTGC AATAAA GCAGGCTG TTTGCTTCCTGGGGC TERM 3236 2356021 - 2356038 + F 71 -8.4 -3.56844 | opp_overlap 2356021 2356019, overlap 2356019 2356014 GTCATCCAGCAAATA GCCTGC AATAAA GCAGGC TGTTTGCTTCCTGGG TERM 3237 2356038 - 2356021 - f 71 -8.4 -3.46647 | opp_overlap 2356019 2356014 2356021, overlap 2356019 GTCATCCAGCAAATA GCCTGC AATAAA GCAGGC TGTTTGCTTCCTGGG yeeN 2356300 - 2357016 + | hypothetical protein TERM 3238 2357024 - 2357058 + F 87 -13.9 -2.88212 | opp_overlap 2357029 2357033, overlap 2357029 2357033 ATCTCTAATTATATT TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATCCTT TERM 3239 2357029 - 2357053 + F 81 -9.4 -3.8766 | opp_overlap 2357029 2357033, overlap 2357024 2357033 TAATTATATTTTAAA GAAATCTGTC TTTAT GGCAGATTTC TTTAATCTCATATAA TERM 3240 2357408 - 2357381 - g 100 -10.6 -5.4387 | opp_overlap 2357390 ACAGAAATCAAAAAA CCCGGTCACTTT TTAC AAGGTAACCGGG TAAAAATAATTTTTA ECUMN_2322 2357252 - 2357431 + | hypothetical protein TERM 3241 2357409 - 2357423 + T 77 -4.4 -5.15381 | overlap 2357390 TACAAGGTAACCGGG TAAAAA TAA TTTTTA TTTTTTAACTGTCTT yeeO 2359287 - 2357647 - | putative Na+-driven multidrug efflux system TERM 3242 2358540 - 2358560 + g 72 -6.2 -4.43681 | TAAGAATATTCAGGC TACCGTTA ATCAG TAGCGGTA TTTTCGTATTCCCTG TERM 3243 2358876 - 2358866 - G 85 -3.2 -5.42862 | ATAGCTGCAAAAAAA GCCA TAA TGAC CATATTGAAGCTGTC TERM 3244 2359383 - 2359401 + r 100 -11.7 -4.86133 | opp_overlap 2359383, overlap 2359392 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG TERM 3245 2359401 - 2359383 - R 93 -11.7 -4.12942 | opp_overlap 2359383 2359392 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG cbl 2360358 - 2359408 - | DNA-binding transcriptional activator of cysteine biosynthesis nac 2361377 - 2360460 - | DNA-binding transcriptional dual regulator of nitrogen assimilation TERM 3246 2361784 - 2361813 + r 83 -12.3 -3.02946 | opp_overlap 2361790, overlap 2361790 AGAGGAGCCAAATTC AAAAAAGCCTGCT TTCA AGCAGGCTTTTTG CTTTCTAATTACCAA TERM 3247 2361790 - 2361807 + r 100 -11.3 -5.05505 | opp_overlap 2361790, overlap 2361784 GCCAAATTCAAAAAA GCCTGCT TTCA AGCAGGC TTTTTGCTTTCTAAT TERM 3248 2361807 - 2361790 - R 100 -11.3 -5.22039 | opp_overlap 2361790 2361784 GCCAAATTCAAAAAA GCCTGCT TTCA AGCAGGC TTTTTGCTTTCTAAT erfK 2362766 - 2361834 - | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain cobT 2363910 - 2362831 - | nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase cobS 2364665 - 2363922 - | cobalamin 5'-phosphate synthase cobU 2365207 - 2364662 - | bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase ECUMN_2330 2365846 - 2365340 - | conserved hypothetical protein, putative Cobalamin biosynthesis protein CbiG TERM 3249 2365969 - 2365942 - H 86 -10.6 -3.87815 | gap 1, overlap 2365945 TGGTAGGGGTATAAA GACGCG-CCGGTA CTC TACCGGACGCTTC CGGGCAACCCACTTC TERM 3250 2365966 - 2365945 - H 74 -10.9 -2.71422 | gap 1, overlap 2365942 TAGGGGTATAAAGAC GCG-CCGGTA CTC TACCGGACGC TTCCGGGCAACCCAC ECUMN_2331 2365994 - 2366170 + | hypothetical protein pocR 2367176 - 2366262 - | Propanediol utilization: transcriptional regulation TERM 3251 2367300 - 2367288 - R 78 -5.5 -4.9645 | AGGACAATAACAAAA GCCTC CAT GAAGC GGGAGACTTTTTAAT pduF 2368227 - 2367379 - | Propanediol diffusion facilitator TERM 3252 2368887 - 2368865 - g 81 -9 -4.07568 | overlap 2368876 GTCGGGGCGGTAAAA GCGGCAACAG ACG CGGGTGCCGC AGCTGCGCGTAACGT ECUMN_2334 2368700 - 2368984 + | putative propanediol utilization protein, polyhedral bodies (pduA-like) ECUMN_2335 2368981 - 2369793 + | putative Propanediol utilization protein: polyhedral bodies pduB pduC 2369812 - 2371476 + | Glycerol dehydratase large subunit TERM 3253 2372012 - 2371992 - g 77 -6 -4.61231 | TCAGATTGGCAAAAA CGCCGCGC GTTAT GCGAAGCG TGAGTCTCCACAACC PduD 2371486 - 2372154 + | Propanediol utilization: diol dehydratase, medium subunit pduE 2372169 - 2372687 + | Propanediol utilization diol dehydratase, small subunit TERM 3254 2373021 - 2373010 - g 70 -5.8 -4.21936 | overlap 2373002 GTCACAACCCGAAAA CTCC GGGC GGAG TGGGGCTGGGCGTAG TERM 3255 2373453 - 2373442 - g 70 -7.2 -4.07885 | opp_overlap 2373432 CAGTGGTCGTGAAAA CGCC TTCT GGCG ACGTTAAAGCCCGTT ECUMN_2339 2372697 - 2374529 + | putative Propanediol utilization: diol dehydratase reactivation PduG TERM 3256 2374861 - 2374840 - g 100 -13.1 -4.07568 | GCCCGCCTGGTAAAA GGAATTCCC TTCC GGGAATTCC ACTCATAATCCACAG ECUMN_2340 2374519 - 2374869 + | putative diol dehydratase reactivation pduH TERM 3257 2375579 - 2375563 - g 77 -6.5 -4.59773 | opp_overlap 2375564, overlap 2375564 TGTCAGCGGCAAAAA GGTGAGC CCC GCTCACT TTGCCTGCACACCAA TERM 3258 2375578 - 2375564 - g 72 -10 -3.35542 | opp_overlap 2375564, overlap 2375563 GTCAGCGGCAAAAAG GTGAGC CCC GCTCAC TTTGCCTGCACACCA TERM 3259 2375564 - 2375578 + G 77 -10 -3.64703 | opp_overlap 2375563 2375564 GTCAGCGGCAAAAAG GTGAGC CCC GCTCAC TTTGCCTGCACACCA ECUMN_2342 2375188 - 2375610 + | putative propanediol utilization protein pduK: polyhedral bodies TERM 3260 2376194 - 2376216 + G 70 -4.9 -4.57569 | CGATGAGGCCAACGC CG-CAGGCGCT GAT AGC-CCTGACG TTTTTGCCACACTGG ECUMN_2343 2375613 - 2376245 + | Putative propanediol utilization protein pduL; putative chormophorylate of CpcA ECUMN_2344 2376242 - 2376733 + | conserved hypothetical protein, putative Propanediol utilization pduM TERM 3261 2376862 - 2376878 + G 72 -10.1 -3.37344 | opp_overlap 2376861 TCTCACGCCATTAAC CGGCGAC GAA GTTGCCG TTGATTCAGTCGGCG ECUMN_2345 2376737 - 2377012 + | putative Propanediol utilization: polyhedral bodies pduN TERM 3262 2377558 - 2377545 - g 72 -6.7 -4.25104 | CGTTGCTCATCAAAA CCTGA TGAT TCAGG AAATCACAAAACGTT ECUMN_2346 2377024 - 2378031 + | putative propanediol utilization B12 related protein (pduO-like) TERM 3263 2379282 - 2379266 - g 70 -5 -4.57341 | opp_overlap 2379270, overlap 2379268 AATCTTTGTCAAAAA CGGCCC CTCCT GGGCGG GTATTGGCGTCGGCG ECUMN_2347 2378028 - 2379413 + | putative CoA-dependent proprionaldehyde dehydrogenase pduP TERM 3264 2380080 - 2380066 - g 72 -7.1 -4.20783 | ACTGCAGTGAAGAAA GGCGA TTGTC TCGCC ACCCGTGGCAAAATG ECUMN_2348 2379424 - 2380536 + | putative Propanediol utilization propanol dehydrogenase pduQ ECUMN_2349 2380533 - 2381876 + | putative propanediol utilization protein: ferredoxin pduS ECUMN_2350 2381879 - 2382433 + | putative Propanediol utilization: polyhedral bodies pduT ECUMN_2351 2382409 - 2382783 + | putative propanediol utilization protein: polyhedral bodies pduU ECUMN_2352 2382788 - 2383231 + | putative Propanediol utilization protein pduV a.k.a. yoeF TERM 3265 2383322 - 2383286 - T 85 -10.9 -3.72982 | opp_overlap 2383293, overlap 2383282 2383289 2383293 ACAGAAAAGAATCAA TGAGCAATGAGGGTTGC CGG GCAACCCTCATTGAATA AAACAGGAATTACTT TERM 3266 2383319 - 2383289 - T 100 -17 -2.93765 | opp_overlap 2383293, overlap 2383286 2383282 2383293 GAAAAGAATCAATGA GCAATGAGGGTTGC CGG GCAACCCTCATTGA ATAAAACAGGAATTA TERM 3267 2383293 - 2383315 + T 100 -16.4 -3.05384 | opp_overlap 2383293 2383289 2383286 2383282 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACAGGA TERM 3268 2383315 - 2383293 - T 100 -16.4 -3.30956 | opp_overlap 2383293, overlap 2383289 2383286 2383282 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACAGGA yeeX 2383727 - 2383332 - | hypothetical protein TERM 3269 2383640 - 2383623 - G 70 -5.6 -4.329 | GAACAGACGAACAAA TTCCAG TACGTC CTGGAA TGAAGGCTTGGTAGT yeeA 2384891 - 2383833 - | conserved hypothetical protein; putative inner membrane protein TERM 3270 2384076 - 2384090 + g 70 -4.2 -4.62471 | overlap 2384084 TTGCTGCATCATATG CTGGGT ATC ACGCAG TTTTTGCGCGTTCAA sbmC 2385563 - 2385090 - | DNA gyrase inhibitor dacD 2386848 - 2385682 - | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) TERM 3271 2385972 - 2386006 + g 72 -5 -4.63218 | overlap 2385973 GTTCCGTACCGACCT TTTTCCCACGATGCAA AAT TTGCACCGTAGTAAAG TTTTGTTGCCCCCAA TERM 3272 2386783 - 2386772 - G 72 -4.4 -4.62069 | overlap 2386777 GGCTGAGGTGAAAAA GGAA TGTT TTCC GCCGCAAAACCAGAC sbcB 2387057 - 2388484 + | exonuclease I TERM 3273 2388514 - 2388496 - T 100 -8.1 -6.23545 | opp_overlap 2388496 2388495 CTGAAACAAAAAAAA CCGGAGC GATAA ACTCCGG CTTTTTGAGATTTAC TERM 3274 2388529 - 2388549 + T 79 -11.9 -2.62653 | overlap 2388528 GCTTTTTGAGATTTA CCGGATGAT TAT GTCATCCGG CTTGTAAGATTATGC yeeF 2389917 - 2388559 - | putative amino-acid/amine transporter TERM 3275 2390098 - 2390072 - R 91 -7.3 -5.26875 | opp_overlap 2390075, overlap 2390075 GTTTGAAGCAAAAAA TAACCGACGCT GATGA AACGTCGGTTT TTAGTCATTTTTTGA TERM 3276 2390095 - 2390075 - R 90 -9 -4.72473 | opp_overlap 2390075, overlap 2390072 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT TERM 3277 2390075 - 2390095 + r 80 -6.8 -4.88129 | opp_overlap 2390075 2390072 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT yeeY 2391113 - 2390184 - | putative DNA-binding transcriptional regulator yeeZ 2391983 - 2391159 - | putative epimerase, with NAD(P)-binding Rossmann-fold domain hisL 2392410 - 2392460 + | his operon leader peptide TERM 3278 2392525 - 2392551 + F 100 -19.5 -5.4505 | opp_overlap 2392525 TGAACGCATGAGAAA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG TERM 3279 2392551 - 2392525 - f 100 -20.2 -3.99405 | opp_overlap 2392525 TGAACGCATGAGAAA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG TERM 3280 2392909 - 2392921 + G 81 -10.5 -3.64703 | CGTCGACTGGATTTC GGCGG CTG CCGCC TTTCGCTGGCAACGC hisG 2392606 - 2393505 + | ATP phosphoribosyltransferase hisD 2393511 - 2394815 + | bifunctional histidinal dehydrogenase and histidinol dehydrogenase TERM 3281 2395671 - 2395685 + G 81 -7.1 -4.70659 | opp_overlap 2395669 2395670 CACTGAAAGAAATCT CCTGC GTGGA GCAGG TTTTTGACTCTGAAA hisC 2394812 - 2395882 + | histidinol-phosphate aminotransferase TERM 3282 2396633 - 2396646 + G 70 -5.9 -4.28487 | opp_overlap 2396633, overlap 2396628 CCCTTGGCGACAAAC GCGGT ATTT GCCGC TTTGGTTTTGTGCTG hisB 2395882 - 2396949 + | fused histidinol-phosphatase ; imidazoleglycerol-phosphate dehydratase hisH 2396949 - 2397539 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF hisA 2397539 - 2398276 + | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase hisF 2398258 - 2399034 + | imidazole glycerol phosphate synthase, catalytic subunit with HisH hisI 2399028 - 2399639 + | fused phosphoribosyl-AMP cyclohydrolase ; phosphoribosyl-ATP pyrophosphatase TERM 3283 2399770 - 2399805 + T 75 -9 -3.57144 | opp_overlap 2399775 2399776, overlap 2399775 2399776 ATCGCATCCGGCAAA AAAAACGGGCAAGGTG TCAC CACCCTGCCCATTTTC TTTAAAACTGCAAAG TERM 3284 2399775 - 2399800 + T 90 -8.9 -4.87803 | opp_overlap 2399775 2399776, overlap 2399770 2399776 ATCCGGCAAAAAAAA CGGGCAAGGTG TCAC CACCCTGCCCA TTTTCTTTAAAACTG TERM 3285 2399800 - 2399775 - T 100 -13.3 -5.75945 | opp_overlap 2399775 2399770 2399776, overlap 2399776 ATCCGGCAAAAAAAA CGGGCAAGGTG TCAC CACCCTGCCCA TTTTCTTTAAAACTG TERM 3286 2399799 - 2399776 - T 100 -14.6 -4.04482 | opp_overlap 2399776 2399775 2399770, overlap 2399775 TCCGGCAAAAAAAAC GGGCAAGGTG TCAC CACCCTGCCC ATTTTCTTTAAAACT TERM 3287 2399776 - 2399799 + T 93 -12.4 -3.51958 | opp_overlap 2399775 2399776, overlap 2399775 2399770 TCCGGCAAAAAAAAC GGGCAAGGTG TCAC CACCCTGCCC ATTTTCTTTAAAACT cld 2400802 - 2399822 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 3288 2400624 - 2400635 + g 81 -5.8 -4.86731 | TGAGTAACGATAGCT GTGG AAGT CCAC TTTTCTTTGGCAACG TERM 3289 2400934 - 2400914 - R 78 -8.3 -4.09554 | AGTAACAAAAGACAA TCAGGGC GTAAATA GCCCTGA TAACAAGATGTTAGT ugd 2402111 - 2400945 - | UDP-glucose 6-dehydrogenase TERM 3290 2401625 - 2401606 - G 78 -7.9 -4.32651 | AACAACGCAGCAAAA CGTTCAG CGCGTT CTGAACG CTCACCTATGACAAT TERM 3291 2401763 - 2401747 - G 77 -8.7 -4.07687 | opp_overlap 2401747 2401748, overlap 2401748 ATCGCTGCGGTAAAA CCAACGG GAA CCGTTGA TTTGATGACCATAAC TERM 3292 2402333 - 2402311 - R 100 -11.2 -6.07627 | opp_overlap 2402310 ATTGGCAAAAAAAAA GCCCGGTGCA ATA TACGCCGGGC CTCAATTTTATTGTT gnd 2403767 - 2402361 - | gluconate-6-phosphate dehydrogenase, decarboxylating TERM 3293 2403793 - 2403807 + r 71 -8.5 -3.56325 | TGTCAGGTGTGGTCA CCGCG ACATA CGCGG TTATGCTTGTAAAGC TERM 3294 2403923 - 2403933 + r 83 -4 -5.40072 | AGGACTCATTGATTA CATT TCG AATG TTTTTTTAGGACGCA ECUMN_2372 2405155 - 2403920 - | Putative O antigen transporter Wzx TERM 3295 2404491 - 2404470 - G 76 -3.9 -4.96848 | GTCTTGAGATAAAAA TTATCTATA CGGC TATAAATAA TTACAACAACAGCTG ECUMN_2373 2406528 - 2405197 - | Putative O antigen polymerase wzy TERM 3296 2405559 - 2405546 - G 71 -3.1 -4.73613 | opp_overlap 2405549, overlap 2405550 2405552 TGATCATCAAGAAAA CCAAG ACCG CTTAG CGGTAATACTTGTGT TERM 3297 2406694 - 2406653 - R 70 -6.7 -4.11906 | ACAATTTATAAACAA TCTATTACTGAGCGGTT AAATGACA AACCGCTCAAGAGTAGA AAAAAGTTTATATTT manB 2408175 - 2406712 - | Phosphomannomutase (PMM) cpsB 2409559 - 2408144 - | Mannose-1-phosphate guanylyltransferase [GDP] (GDP-mannose pyrophosphorylase) (GMP) wbaD 2410763 - 2409561 - | Mannosyl transferase wbaD wbaC 2411793 - 2410756 - | Mannosyl transferase WbaC galF 2413047 - 2412154 - | putative subunit with GalU wcaM 2414616 - 2413222 - | putative colanic acid biosynthesis protein TERM 3298 2413341 - 2413356 + g 79 -4 -5.03314 | CATGAACATTTGCAA GAGACA GCAG TGTTTC TTTTTTCGCCATAAA TERM 3299 2414158 - 2414175 + g 73 -4.1 -4.85782 | overlap 2414160 CAGGTTATCGATGGT CAGGTTA CGCA TAACCCG TTTGTTTTTGCCGCC TERM 3300 2414578 - 2414560 - G 70 -10.3 -3.18383 | AGGGGTATGGAGGAA GGCAAGC GCGGA GCTTGCC GTCAGGAAGGTGCGT TERM 3301 2414646 - 2414634 - R 71 -7.7 -3.85698 | GTTCTCCTCTATAAA GCTTG CAG CAAGC TGGCGAGTTCTCGAT wcaL 2415847 - 2414627 - | putative glycosyl transferase TERM 3302 2415263 - 2415273 + g 74 -2.4 -5.03145 | GGCAATTTTTTCCCT CGGG CAG CCCA TTTTTTGCAGCCTTC TERM 3303 2415698 - 2415716 + g 75 -5.2 -4.61199 | overlap 2415701 GGCAAGGTTGTATTT CGTCCATG CCG CGTGGGTG TTTTGTGTGTCGCCT TERM 3304 2415845 - 2415833 - G 71 -3.4 -4.75404 | opp_overlap 2415833 AAATTTCAGTAAAAA GAAG CCGAC CTTC ATTTCACCTCCCCGA wcaK 2417124 - 2415844 - | putative pyruvyl transferase TERM 3305 2416387 - 2416418 + g 75 -4.4 -4.73682 | gap 1 GAGACGTTTGTCGAA CGGTGCCAGTT-CGC GCA GGGTAATTGCCACCG TTTTCTGTTGTGCGG TERM 3306 2417280 - 2417239 - R 100 -12.9 -3.54951 | opp_overlap 2417244 2417254 2417255, overlap 2417254 2417255 GACCCGAGCACAGAA CCGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATTCAG TGCCTGATGCGACGC TERM 3307 2417244 - 2417275 + r 73 -10 -3.08464 | opp_overlap 2417239 2417254 2417255, overlap 2417254 2417255 GAGCACAGAACCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTCAGTGCCTGATGC TERM 3308 2417254 - 2417304 + r 76 -10.5 -3.30124 | gap 2, opp_overlap 2417239 2417254 2417255, overlap 2417244 2417255 2417301 CCGTAGGCCGGATAA GGCGT-TCA-CGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGCGTC TTATCAGGCCTACAG TERM 3309 2417302 - 2417254 - R 83 -11.6 -3.30124 | opp_overlap 2417244 2417254 2417255 2417301, overlap 2417239 2417255 CCGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGCG TCTTATCAGGCCTAC TERM 3310 2417255 - 2417301 + r 86 -13.6 -2.5294 | opp_overlap 2417239 2417255 2417254, overlap 2417244 2417254 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 3311 2417301 - 2417255 - R 89 -15.1 -2.57931 | opp_overlap 2417244 2417254 2417255, overlap 2417239 2417254 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 3312 2417301 - 2417353 + r 86 -10.6 -4.08216 | gap 1, opp_overlap 2417254 2417335 2417350, overlap 2417254 GATGCGACGCTGACG CGTCTTATCAGGCCTACAGGTCCCG AGCA CAGAACC-GTAGGACGGATAAGGCG TTTTACGCCGCATCC TERM 3313 2417362 - 2417350 - R 71 -9.1 -3.37796 | opp_overlap 2417301 CCGTAGGACGGATAA GGCGT TTT ACGCC GCATCCGGCAACCAT wzxC 2418878 - 2417400 - | colanic acid exporter wcaJ 2420274 - 2418880 - | putative UDP-sugar lipid carrier transferase TERM 3314 2420090 - 2420075 - G 74 -3.2 -4.88736 | overlap 2420077 CATGAGCGATAAAAA TCGGTG ATGC CACCCA GCATCTGGAACACCA cpsG 2421699 - 2420329 - | phosphomannomutase TERM 3315 2421725 - 2421747 + r 81 -3.4 -5.3658 | overlap 2421732 TTTTTCAGGCAATAG TTGGCCCT GACCGAA ACGGCCAA TTTTGTTTTTGTCGT TERM 3316 2421898 - 2421850 - R 76 -10.2 -3.30124 | opp_overlap 2421858 CCGTAGGTCGGATAA GGCGTTCACGCCGCATCCGACA AACTG CGCCTGATGCGACGTTTACACC CGCCCGTAGCGATCC cpsB 2423328 - 2421892 - | mannose-1-phosphate guanyltransferase wcaI 2424554 - 2423331 - | putative glycosyl transferase TERM 3317 2423698 - 2423722 + g 76 -3.5 -5.00616 | overlap 2423700 GGGAAGAATTGCATG TTGCGCAGT CCACGCT GCTGCGCCA TTTTTTCCAGCCGCG TERM 3318 2424225 - 2424207 - G 70 -6.6 -4.07568 | TCCCGGCGTGCAAAA CAGCGTTG GCA CCACGCCG ATAATGCGATCCGGC nudD 2425030 - 2424551 - | GDP-mannose mannosyl hydrolase fcl 2425998 - 2425033 - | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase gmd 2427122 - 2426001 - | GDP-D-mannose dehydratase, NAD(P)-binding wcaF 2427697 - 2427149 - | putative glycose-acyl transferase wcaE 2428459 - 2427713 - | putative glycosyl transferase wcaD 2429687 - 2428470 - | putative colanic acid polymerase TERM 3319 2429602 - 2429617 + gr 70 -6.1 -4.19238 | GTGATGGGGAAACTT TCGCC AAGCTG GGCGA TTTTGACGTTAACCA wcaC 2430879 - 2429662 - | putative glycosyl transferase wcaB 2431364 - 2430876 - | putative acyl transferase wcaA 2432206 - 2431367 - | putative glycosyl transferase wzc 2434461 - 2432299 - | protein-tyrosine kinase wzb 2434907 - 2434464 - | protein-tyrosine phosphatase TERM 3320 2434625 - 2434656 + g 70 -5.8 -4.21194 | TGCCGCGCATCTCAG GTGCCATCTCGCAT AAGC GTTCGATATGGCGC TTTTCCATGGTCAAA wza 2436052 - 2434913 - | lipoprotein required for capsular polysaccharide translocation through the outer membrane TERM 3321 2437485 - 2437441 - g 75 -11.3 -2.90075 | opp_overlap 2437450, overlap 2437439 TTTCCGCTAACCAGA CGCTGCGCCAGCGGACTACCG AAG CGGTAATGCGCCTGCTTAGCG GGCAAAAAGAAGATG yegH 2436711 - 2438294 + | fused putative membrane protein ; putative membrane protein TERM 3322 2438334 - 2438300 - f 100 -13 -4.37886 | opp_overlap 2438302 2438307, overlap 2438302 CGAGGTGTGATAAAA CATCAAATGCGCAGGT TCA AACTGCGCATTTGATT TATACAAAATTTAGT TERM 3323 2438332 - 2438302 - f 100 -15.6 -3.79687 | opp_overlap 2438302 2438307, overlap 2438300 AGGTGTGATAAAACA TCAAATGCGCAGGT TCA AACTGCGCATTTGA TTTATACAAAATTTA TERM 3324 2438302 - 2438332 + F 100 -15.6 -3.88583 | opp_overlap 2438300 2438302, overlap 2438307 AGGTGTGATAAAACA TCAAATGCGCAGGT TCA AACTGCGCATTTGA TTTATACAAAATTTA TERM 3325 2438307 - 2438327 + F 81 -9.7 -4.13995 | opp_overlap 2438302 2438300, overlap 2438302 TGATAAAACATCAAA TGCGCAGGT TCA AACTGCGCA TTTGATTTATACAAA ECUMN_2400 2438369 - 2438707 + | hypothetical protein ECUMN_2401 2438679 - 2438987 + | hypothetical protein TERM 3326 2439030 - 2438997 - T 93 -11.8 -3.87815 | opp_overlap 2438997, overlap 2438999 GCTTAGTGCTATAAA TACAGATGGCGACA AATTGA CGCCGCCATCTGCA TAACTTGTCTTACAT TERM 3327 2439028 - 2438999 - T 88 -12.2 -3.52906 | opp_overlap 2438997, overlap 2438997 TTAGTGCTATAAATA CAGATGGCGACA AATTGA CGCCGCCATCTG CATAACTTGTCTTAC asmA 2440893 - 2439040 - | putative inner membrane protein involved in outer membrane protein assembly TERM 3328 2439672 - 2439691 + g 74 -8.6 -3.8709 | overlap 2439673 2439679 TACCAATCTCAACGT TTTCCAGC CGTG GCTGGAAG TTTATCCGCGGATTT TERM 3329 2440027 - 2440056 + g 70 -7.1 -4.128 | GTCAAGATTCAGTTG CGGGAATTGCAGT CTCA GCTGCCATTCCGG TTTCTCTGTCAACGT TERM 3330 2440714 - 2440755 + g 74 -10.8 -3.14931 | opp_overlap 2440713 2440714 GGAGAGGATACTAAG TTGCGGCCAGACGTGCCA ACGCAG TGGCCCGTCGAGCTGCAA TTGATAACCGCTACG dcd 2441496 - 2440915 - | 2'-deoxycytidine 5'-triphosphate deaminase udk 2442229 - 2441588 - | uridine/cytidine kinase TERM 3331 2442986 - 2443011 + G 75 -4.6 -4.81551 | overlap 2442987 TGGTTATCCTGCTGA CGCCCGGAGA CGATCC TCTCAGGGCA TTTTTGATATGGGTA TERM 3332 2443103 - 2443117 + G 95 -10 -4.67353 | ATCTGCTGCGCCATC GCAACC CAC GGTTGC TTTTTGAGTCGCTGC TERM 3333 2443467 - 2443432 - g 88 -12 -3.75153 | gap 1, overlap 2443436 2443437 2443451 2443452 CGTGCGGAACGCAAA CACATTTCCGAAAGCGA AAC CCGCTTTCGGAA-CGCG ATGGAATATTCCGCT TERM 3334 2443464 - 2443436 - g 83 -12.5 -3.30106 | overlap 2443432 2443437 2443451 2443452 CGGAACGCAAACACA TTTCCGAAAGCGA AAC CCGCTTTCGGAAC GCGATGGAATATTCC TERM 3335 2443463 - 2443437 - g 100 -16 -2.57581 | overlap 2443436 2443432 2443451 2443452 GGAACGCAAACACAT TTCCGAAAGCGA AAC CCGCTTTCGGAA CGCGATGGAATATTC TERM 3336 2443702 - 2443681 - g 71 -2.9 -4.75174 | overlap 2443692 TATTCAATGGAAAAA CGCTACTAC AACC GCAATGGCG ATGTTGTCTGGGCGT yegE 2442547 - 2445864 + | putative diguanylate cyclase, GGDEF domain signalling protein alkA 2446759 - 2445902 - | 3-methyl-adenine DNA glycosylase II TERM 3337 2446997 - 2446979 - g 70 -5.2 -4.43272 | opp_overlap 2446980, overlap 2446980 ACTGAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG TERM 3338 2447734 - 2447721 - g 73 -3.8 -4.81249 | opp_overlap 2447721 GGCGAAACCGAAAAA GGCA TCGCCC TGCC TATTCTGCCGTGGTG yegD 2446893 - 2448245 + | putative chaperone yegI 2450204 - 2448258 - | hypothetical protein yegJ 2450405 - 2450866 + | hypothetical protein TERM 3339 2450923 - 2450892 - T 72 -8.8 -3.58037 | opp_overlap 2450896 2450917, overlap 2450893 TATTAATTGCTTAAA CTGGCGGTTGAA CTGTTGTC TTCAACCGCCAT GCGATGTTCATTCTG TERM 3340 2450922 - 2450893 - T 82 -12.3 -2.74501 | opp_overlap 2450896 2450917, overlap 2450892 ATTAATTGCTTAAAC TGGCGGTTGAA CTGTTGTC TTCAACCGCCA TGCGATGTTCATTCT yegK 2451692 - 2450931 - | hypothetical protein TERM 3341 2451197 - 2451181 - G 71 -9.5 -3.53444 | TCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC CGCATCTTCATCGGT TERM 3342 2451428 - 2451407 - G 72 -5.2 -4.56597 | gap 1, overlap 2451409 CCGCCTCGGCAAAAA GTCGCTGAC GAATG GTCAGC-AC AATATCCGTGGCGAG yegL 2452348 - 2451689 - | hypothetical protein TERM 3343 2452160 - 2452170 + g 72 -5.4 -4.56597 | GAACGTCACAATGCC GAGT TCC ACTC TTTTTAAGGCCAGCG TERM 3344 2452649 - 2452668 + H 80 -10 -3.71649 | opp_overlap 2452649 2452648, overlap 2452659 TTTCCTTATTAAAAG CCCTCTTC TCCG GGAGAGGG TTTCCCGTTTCAGCG TERM 3345 2452659 - 2452675 + H 72 -8.7 -3.57263 | opp_overlap 2452649 2452648, overlap 2452649 AAAAGCCCTCTTCTC CGGGAGA GGG TTTCCCG TTTCAGCGTCCCGCT TERM 3346 2452977 - 2452996 + H 91 -11.4 -3.71649 | opp_overlap 2452976, overlap 2452987 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 3347 2453305 - 2453324 + H 91 -11.4 -3.71649 | opp_overlap 2453304, overlap 2453315 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 3348 2453633 - 2453652 + H 91 -11.4 -3.71649 | opp_overlap 2453632, overlap 2453643 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 3349 2454564 - 2454541 - g 74 -8.2 -3.90291 | gap 1, opp_overlap 2454541 2454543 ATGTTGGTAACCAAA TCTCCAGTGGT GAT ACCACCGG-GA TTGTGGTGATCACCC mdtA 2453892 - 2455139 + | multidrug efflux system, subunit A TERM 3350 2455136 - 2455125 - f 80 -5.8 -5.09173 | opp_overlap 2455135 GAATACGCGAAAAAA GGAG CACG CTCC TGATGCAGGTGTTAC TERM 3351 2455164 - 2455183 + G 72 -6.4 -4.33819 | opp_overlap 2455166 TACCCCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 3352 2456435 - 2456423 - g 81 -6.2 -4.7657 | overlap 2456415 GAAAAAGGCGAAAAA CCGC TGGCG GCGG CGCTCAAAGGCGCAG mdtB 2455139 - 2458261 + | multidrug efflux system, subunit B TERM 3353 2458736 - 2458788 + G 72 -10.5 -3.01924 | opp_overlap 2458767 2458768, overlap 2458736 2458745 CTGTACGATTTTGCC TCGACGCAGCTGGCTCCGACGATTT CGC AAATCGACGGTGTCGGTGATGTCGA TGTTGGCGGCAGCTC TERM 3354 2458745 - 2458779 + G 73 -11.4 -2.66787 | opp_overlap 2458767 2458768, overlap 2458736 2458736 TTTGCCTCGACGCAG CTGGCTCCGACGATTT CGC AAATCGACGGTGTCGG TGATGTCGATGTTGG TERM 3355 2458993 - 2458971 - g 78 -7.6 -4.30416 | opp_overlap 2458973 2458984, overlap 2458973 2458984 2458987 ACGATGAACTGAAAA CTGCCGCTGA ATA TCAGCCGCTG ATTATTCATTACAAC TERM 3356 2461037 - 2461021 - g 77 -3 -5.07486 | gap 1, opp_overlap 2461021 2461023, overlap 2461023 CATCGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG mdtC 2458262 - 2461339 + | multidrug efflux system, subunit C mdtD 2461340 - 2462755 + | multidrug efflux system protein TERM 3357 2463075 - 2463031 - g 78 -8.4 -4.20025 | gap 1, opp_overlap 2463037, overlap 2463027 AATTCGGAAGATAAA CCCGGCCCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAGTTCTGG GTGGTCGATCAAAAC TERM 3358 2463037 - 2463069 + G 80 -12 -3.37975 | gap 1, opp_overlap 2463027 2463031 GAAGATAAACCCGGC CCGGGTATGCC-GCC GCAC GGCTGGCGTACCCAG TTCTGGGTGGTCGAT baeS 2462752 - 2464155 + | sensory histidine kinase in two-component regulatory system with BaeR TERM 3359 2464586 - 2464597 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCATG TERM 3360 2464784 - 2464772 - g 78 -5.5 -4.81551 | overlap 2464773 CAGCCACATTAAAAA CCTGC GCC GCAAG CTGGAATCTCTCGAC baeR 2464152 - 2464874 + | DNA-binding response regulator in two-component regulatory system with BaeS yegP 2465054 - 2465386 + | hypothetical protein yegQ 2465534 - 2466895 + | putative peptidase TERM 3361 2467029 - 2467060 + T 91 -8.1 -5.28176 | overlap 2467032 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTATGCATAAG TERM 3362 2467032 - 2467057 + T 91 -9.8 -4.73105 | overlap 2467029 GGAACCACCTCCTTA GCCTGTGTAA TCTCCC TTACACGGGC TTATTTTTTATGCAT TERM 3363 2467159 - 2467131 - T 85 -11.8 -3.29043 | overlap 2467150 AATCCCCCTTCATAA CACGATGCCTTT CACGT AACGGCATCGTG CTCGTACAGATTCCG yegR 2467541 - 2467224 - | hypothetical protein TERM 3364 2468438 - 2468424 - g 71 -2.7 -4.77757 | opp_overlap 2468428 CCGGAAAAATTAAAA GCCGC GCTGG GTGGC GTCTCTTACATCATT yegS 2467956 - 2468855 + | hypothetical protein TERM 3365 2468930 - 2468886 - T 74 -9.4 -3.39595 | gap 1 TTGAACCAGGGAGAA TCCGTAATGCCGGATGCGGTA TAAA CACCTTATCCGGCA-TACAGA ACAATACTACACCGT gatR 2469716 - 2468937 - | Galactitol utilization operon repressor TERM 3366 2469559 - 2469572 + g 74 -2.3 -5.06414 | opp_overlap 2469558, overlap 2469560 GCACCGCCATGAAAG CGCGT AACC ACGCC TTTTTGTTCGAGAAA TERM 3367 2469786 - 2469813 + r 73 -9.1 -3.54424 | gap 1, opp_overlap 2469785 2469787 2469788, overlap 2469787 TCTGTTTTGCACAAT AC-CGGGCCAGC ATCAC GCTGGCCCGCGG TTTCAGGGAATAAGC TERM 3368 2469787 - 2469812 + r 82 -12.6 -2.72511 | gap 1, opp_overlap 2469785 2469787 2469788, overlap 2469786 CTGTTTTGCACAATA C-CGGGCCAGC ATCAC GCTGGCCCGCG GTTTCAGGGAATAAG TERM 3369 2469811 - 2469787 - R 93 -13.5 -3.21276 | opp_overlap 2469787 2469786, overlap 2469785 2469788 CTGTTTTGCACAATA CCGGGCCAGCA TCA CGCTGGCCCGC GGTTTCAGGGAATAA TERM 3370 2469810 - 2469788 - R 100 -17 -2.52623 | opp_overlap 2469787 2469786, overlap 2469787 2469785 TGTTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCAGGGAATA gatD 2470856 - 2469816 - | galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding TERM 3371 2469966 - 2469990 + g 70 -9.9 -3.15544 | overlap 2469963 CGCCGTTTCCCACTC CTGCCCCGGCC AAG GGCTGGAGTAG TTCATCCAACTGCCG gatC 2472259 - 2470904 - | galactitol-specific enzyme IIC component of PTS gatB 2472547 - 2472263 - | galactitol-specific enzyme IIB component of PTS gatA 2473030 - 2472578 - | galactitol-specific enzyme IIA component of PTS gatZ 2474302 - 2473040 - | D-tagatose 1,6-bisphosphate aldolase 2, subunit gatY 2475185 - 2474331 - | D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit TERM 3372 2475328 - 2475307 - R 100 -13.7 -5.50499 | TGACAGGCAAAAAAA CGGCCTCCC GATA GGGAAGCCG TAGCAAAGTGCGCGT fbaB 2476465 - 2475413 - | fructose-bisphosphate aldolase class I TERM 3373 2476745 - 2476729 - g 85 -8.7 -4.56729 | opp_overlap 2476729 2476732 ATTAAAAGATGAAAA CAACAGC AAA GCTGTCG TTCATGATGTTTGTT TERM 3374 2477500 - 2477510 + G 70 -4.6 -4.56597 | overlap 2477509 AAATCTTCTTTATGC TGGC ATT GCCG TTTTTCACCAAACGC TERM 3375 2477739 - 2477706 - g 79 -2.3 -5.252 | overlap 2477708 TATGTCGATAAAAAA GCCCCCGTGCA TATGCGTACCGC CGCGCAGGGGC TGATCACGCTCTGCT TERM 3376 2477875 - 2477904 + G 80 -11.5 -3.27622 | overlap 2477873 GGATGTGGACTTTTG GCGCGGTGATGAT TGCC ATTATCGCCGTGC TGTTCATGATTTTTT yegT 2476722 - 2477999 + | putative hydrophilic substrate transporter; MFS superfamily TERM 3377 2478313 - 2478301 - g 77 -3.3 -5.06414 | overlap 2478305 CGCCTTTAACAAAAA CGTAC TAG GTCCG ACCTCGAAGATTGCG yegU 2477996 - 2479000 + | putative (phospho)hydrolase TERM 3378 2479064 - 2479094 + G 80 -11.9 -3.33162 | gap 1, opp_overlap 2479036, overlap 2479055 CGGTGATGGTCGTCG GCG-CGGCGGTCAT TGAT GTGATCGCCGACGC TTATGCCCTCCCCTG yegV 2478997 - 2479962 + | putative kinase yegW 2480682 - 2479936 - | putative DNA-binding transcriptional regulator TERM 3379 2479997 - 2480045 + g 93 -11 -4.39568 | opp_overlap 2479997, overlap 2479999 ATGCTGTACTCAATA GGCCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGGTA TTTTGCTATCTAACT TERM 3380 2479999 - 2480043 + g 100 -15.8 -3.79993 | opp_overlap 2479997, overlap 2479997 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA TERM 3381 2480550 - 2480581 + g 83 -5.1 -5.12707 | gap 1, opp_overlap 2480549 2480550 CACCGGGCAAAATAT TGCCATGCTCCAGC ACCCC GCTGC-GCACGGCA TTTTTTACCGTTTCG TERM 3382 2480631 - 2480613 - G 78 -8.8 -4.25401 | CAAACTTAATATAAA GCGGCG TGTTATC CGCCGC TAAAATACGTTCGTT yegX 2481552 - 2480734 - | putative membrane-bound hydrolase TERM 3383 2481182 - 2481164 - G 70 -5.2 -4.41633 | opp_overlap 2481170, overlap 2481167 2481169 GACGGGGAAAAATAA TGATACGC CCC GCGCAGCA GGCCATTTTCGCGGC thiD 2482417 - 2481617 - | bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase TERM 3384 2482083 - 2482069 - G 73 -9.2 -3.66178 | opp_overlap 2482070 2482072 CTGCCGAAGGTGAAA GCAGCG GGT CGCCGC TTTTTGCCAGCATAA TERM 3385 2482072 - 2482083 + g 77 -7.2 -4.57569 | opp_overlap 2482069, overlap 2482070 CCGAAGGTGAAAGCA GCGG GTCG CCGC TTTTTGCCAGCATAA thiM 2483202 - 2482414 - | hydoxyethylthiazole kinase yohL 2483697 - 2483425 - | hypothetical protein TERM 3386 2483956 - 2483924 - g 70 -4 -4.66609 | overlap 2483927 CAGGGCACTCAAAAA CGATGATGGCGGCG TTTAT CATCGCCATCAAAG ACACCATTAAACAGG rncA 2483818 - 2484642 + | nickel and cobalt resistance TERM 3387 2484725 - 2484743 + G 74 -7.4 -4.08919 | CTCTCTGCTCGCTAA GGATGCTT TTA GGGCATCC TTTCATTTACACTTT yohN 2484681 - 2485199 + | hypothetical protein TERM 3388 2485226 - 2485206 - T 95 -8.2 -5.41143 | overlap 2485207 CATCGCTGAAAAAAA GCCCCCTC GAAGA GAGGGGGA AATGCAGACACCTTA TERM 3389 2485225 - 2485207 - T 93 -11.7 -3.83963 | overlap 2485206 ATCGCTGAAAAAAAG CCCCCTC GAAGA GAGGGGG AAATGCAGACACCTT yehA 2486315 - 2485281 - | putative exported fimbrial-like adhesin protein TERM 3390 2486028 - 2486040 + g 79 -4.1 -5.14163 | GGTCTGATTATTTGA CAACG TGA TGTTG TTTTTATTGGTCCAT yehB 2488811 - 2486331 - | conserved hypothetical protein; putative outer membrane protein yehC 2489501 - 2488827 - | putative membrane-associated pilin chaperone TERM 3391 2489545 - 2489524 - R 100 -12.3 -4.54727 | opp_overlap 2489523 2489521 2489524 CCTCTTAAATTAAAA GGCCGCCAT GGGG ATAGCGGCC ATGTTTATTAACTGG TERM 3392 2489524 - 2489545 + r 71 -10.1 -2.81702 | opp_overlap 2489524, overlap 2489523 2489521 CCTCTTAAATTAAAA GGCCGCCAT GGGG ATAGCGGCC ATGTTTATTAACTGG yehD 2490124 - 2489582 - | putative fimbrial-like adhesin protein TERM 3393 2490210 - 2490225 + r 80 -6.2 -4.84642 | opp_overlap 2490223 TCAAAAAAGTTGCCG CAATGT AAAC ACATTG TTTTATTGATTTAAA TERM 3394 2490384 - 2490355 - R 100 -16.7 -5.5353 | opp_overlap 2490355 GATATCAATAAAAAA GCTGAAATCATTC ACAC GAATGATTTCAGC TTTCTAAATCCGATT TERM 3395 2490355 - 2490384 + r 100 -16.7 -3.92641 | opp_overlap 2490355 GATATCAATAAAAAA GCTGAAATCATTC ACAC GAATGATTTCAGC TTTCTAAATCCGATT yehE 2490700 - 2490419 - | hypothetical protein TERM 3396 2490933 - 2490901 - R 91 -9.9 -4.85782 | opp_overlap 2490905, overlap 2490876 TGCGGCAAAAACAAA TACACCGCATCAATG TAA CATCTCTGCGGTGTA TGAAAAGCAACCAAA mrp 2492072 - 2490963 - | antiporter inner membrane protein TERM 3397 2492571 - 2492554 - g 72 -8.5 -3.81488 | TCGCCTGAAAGAGAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 3398 2492616 - 2492603 - g 70 -3.8 -4.60487 | opp_overlap 2492608 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTAAA TERM 3399 2493245 - 2493233 - g 76 -9.1 -3.73775 | opp_overlap 2493229 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG TERM 3400 2494151 - 2494128 - g 76 -7.5 -4.21194 | gap 1 TGGCACCACGTAAAA TGCGCTTCGG TATCT CCGAAG-GCA TGGTGATGGCTGCCG metG 2492204 - 2494237 + | methionyl-tRNA synthetase TERM 3401 2494249 - 2494268 + F 100 -10.7 -5.01553 | ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT TERM 3402 2494667 - 2494657 - g 71 -2.4 -4.94262 | GAGAGTAAAAACAAA CGCC CAT GGCT GGCTGATGATGCAGT TERM 3403 2495632 - 2495645 + G 71 -9.5 -3.50326 | opp_overlap 2495626, overlap 2495626 CAAAAACATCCCGCT GCGGC TCTT GCCGC TTATGCTACTTTGCT TERM 3404 2496072 - 2496052 - g 73 -4 -4.7629 | opp_overlap 2496052 CCACTAATTGAAAAA GAAAGCTG GGAGA CATCTTTC ATTCCTTTTACACCA ECUMN_2447 2494378 - 2498175 + | putative conserved protein involved in molybdate metabolism TERM 3405 2500103 - 2500127 + G 72 -4.9 -4.69656 | overlap 2500104 AGTTTGTCATGACGC ACCTGCAACTC GCT GGGTTACAGGG TTTTATTCACTCCTT TERM 3406 2501167 - 2501153 - g 78 -5.7 -4.75309 | overlap 2501164 CCAAACCGAACAAAA GCGAT GATGA ATCGC GGTCGAACGATGCGG TERM 3407 2501650 - 2501632 - g 70 -5.3 -4.42386 | gap 1, overlap 2501612 2501634 TGGGCAGGCAGAAAA TG-CCCGA GCGG TCGGGTCA TGGGACTGGCGAATA ECUMN_2448 2498188 - 2501949 + | putative molybdate metabolism regulator (molR-like) TERM 3408 2502029 - 2502019 - g 100 -4.6 -5.56264 | overlap 2502027 2502028 CTGAAATATAAAAAA GGCA AAA CGCC GCTCAGCCATCGCAG TERM 3409 2503060 - 2503047 - g 81 -4.5 -5.10767 | CATCGAAGACAAAAA GCTGC CTGC ACAGC AAAAAGCTCGAGATG yehI 2501959 - 2505591 + | hypothetical protein TERM 3410 2505625 - 2505594 - f 84 -9.5 -4.2558 | opp_overlap 2505599, overlap 2505596 2505599 CATTTTCCATTAAAA CACAACGGGCAGT GATGCG ACTGCCCGTTATC AACACGACTTACCAT TERM 3411 2505623 - 2505596 - f 93 -12.1 -3.73042 | opp_overlap 2505599, overlap 2505594 2505599 TTTTCCATTAAAACA CAACGGGCAGT GATGCG ACTGCCCGTTA TCAACACGACTTACC TERM 3412 2505599 - 2505620 + F 83 -11.6 -3.29043 | opp_overlap 2505596 2505594 2505599 TCCATTAAAACACAA CGGGCAGT GATGCG ACTGCCCG TTATCAACACGACTT TERM 3413 2505620 - 2505599 - f 91 -11.6 -3.99481 | opp_overlap 2505599, overlap 2505596 2505594 TCCATTAAAACACAA CGGGCAGT GATGCG ACTGCCCG TTATCAACACGACTT yehK 2505652 - 2505957 + | hypothetical protein TERM 3414 2505987 - 2505968 - f 77 -9.3 -3.74519 | opp_overlap 2505968 AATAGCTTTATTAAA GGGGGAA ACGGTA TTCCCCC TTAGATGCGTTTCAA TERM 3415 2506428 - 2506380 - f 81 -9.8 -3.94853 | opp_overlap 2506388 2506396, overlap 2506383 2506393 2506396 TAACTTAACATCAAA GTAGTAAATAAAAGAACCTGCC TCACC AGCAGGTTTTTTTATTTTCTGC GATCTACTTTCCAGA TERM 3416 2506425 - 2506383 - f 73 -10.1 -3.02568 | opp_overlap 2506388 2506396, overlap 2506380 2506393 2506396 CTTAACATCAAAGTA GTAAATAAAAGAACCTGCC TCACC AGCAGGTTTTTTTATTTTC TGCGATCTACTTTCC TERM 3417 2506388 - 2506420 + F 87 -10.1 -4.41548 | opp_overlap 2506383 2506380 2506393 2506396, overlap 2506396 CATCAAAGTAGTAAA TAAAAGAACCTGC CTCACCA GCAGGTTTTTTTA TTTTCTGCGATCTAC TERM 3418 2506415 - 2506393 - f 74 -4.1 -4.96388 | opp_overlap 2506388 2506396, overlap 2506383 2506380 2506396 AAGTAGTAAATAAAA GAACCTGCC TCACC AGCAGGTTT TTTTATTTTCTGCGA TERM 3419 2506396 - 2506412 + F 100 -5.1 -6.14618 | opp_overlap 2506393 2506383 2506380 2506396, overlap 2506388 TAGTAAATAAAAGAA CCTGC CTCACCA GCAGG TTTTTTTATTTTCTG TERM 3420 2506412 - 2506396 - f 72 -5.8 -4.56436 | opp_overlap 2506396 2506388, overlap 2506393 2506383 2506380 TAGTAAATAAAAGAA CCTGCC TCACC AGCAGG TTTTTTTATTTTCTG TERM 3421 2506576 - 2506595 + F 73 -10 -3.11732 | opp_overlap 2506576, overlap 2506567 AATCATTTTATTAAA GGGGGAAG CGGT TTTCCCCC TTAGATGCGTTTCAA TERM 3422 2506595 - 2506576 - f 77 -9.3 -3.75437 | opp_overlap 2506576 2506567 AATCATTTTATTAAA GGGGGAA GCGGTT TTCCCCC TTAGATGCGTTTCAA TERM 3423 2506986 - 2507042 + F 82 -12.7 -2.92439 | opp_overlap 2506991 2506993 2506998 2507003 2507006, overlap 2506993 2506998 2507006 2507041 TGCGGTGTTGGGCCT GAAAATAGTAAATAAAAGAACCTGC CTCACCA GCAGGTTTTTTTATTTACTGTGATC TGCTTTCCAGATATT TERM 3424 2507037 - 2506991 - f 93 -11.9 -4.07568 | opp_overlap 2506986 2506993 2506998 2507006, overlap 2506993 2506998 2507003 2507006 TGTTGGGCCTGAAAA TAGTAAATAAAAGAACCTGCC TCACC AGCAGGTTTTTTTATTTACTG TGATCTGCTTTCCAG TERM 3425 2506993 - 2507035 + F 100 -16 -2.90725 | opp_overlap 2506991 2506993 2506998 2507003 2507006, overlap 2506986 2506998 2507006 TTGGGCCTGAAAATA GTAAATAAAAGAACCTGC CTCACCA GCAGGTTTTTTTATTTAC TGTGATCTGCTTTCC TERM 3426 2507035 - 2506993 - f 100 -14.5 -3.63744 | opp_overlap 2506993 2506986 2506998 2507006, overlap 2506991 2506998 2507003 2507006 TTGGGCCTGAAAATA GTAAATAAAAGAACCTGCC TCACC AGCAGGTTTTTTTATTTAC TGTGATCTGCTTTCC TERM 3427 2506998 - 2507030 + F 82 -10.1 -3.8766 | opp_overlap 2506993 2506991 2506998 2507003 2507006, overlap 2506993 2506986 2507006 CCTGAAAATAGTAAA TAAAAGAACCTGC CTCACCA GCAGGTTTTTTTA TTTACTGTGATCTGC TERM 3428 2507030 - 2506998 - f 78 -8.6 -4.07678 | opp_overlap 2506998 2506993 2506986 2507006, overlap 2506993 2506991 2507003 2507006 CCTGAAAATAGTAAA TAAAAGAACCTGCC TCACC AGCAGGTTTTTTTA TTTACTGTGATCTGC TERM 3429 2507025 - 2507003 - f 74 -4.1 -5.00923 | opp_overlap 2506998 2506993 2506986 2507006, overlap 2506998 2506993 2506991 2507006 AAATAGTAAATAAAA GAACCTGCC TCACC AGCAGGTTT TTTTATTTACTGTGA TERM 3430 2507006 - 2507022 + F 100 -5.1 -5.99154 | opp_overlap 2507003 2506998 2506993 2506991 2507006, overlap 2506998 2506993 2506986 TAGTAAATAAAAGAA CCTGC CTCACCA GCAGG TTTTTTTATTTACTG TERM 3431 2507022 - 2507006 - f 72 -5.8 -4.56436 | opp_overlap 2507006 2506998 2506993 2506986, overlap 2507003 2506998 2506993 2506991 TAGTAAATAAAAGAA CCTGCC TCACC AGCAGG TTTTTTTATTTACTG TERM 3432 2507992 - 2507973 - g 81 -5 -5.08255 | overlap 2507974 ACGGCGAAAAGAAAA CGTCAATG GATA CACTGACA GCGATTATGTCCACC yehL 2507141 - 2508229 + | putative ABC superfamily protein TERM 3433 2509577 - 2509604 + G 82 -12 -3.53224 | opp_overlap 2509565, overlap 2509565 CCAGCCGCTTAGCCA GCATGCGGCATT AATT GAGGCCGCATGC TTTGGCGCCACACTC yehM 2508240 - 2510519 + | hypothetical protein TERM 3434 2510960 - 2510984 + G 76 -4.2 -4.95155 | overlap 2510962 AAGAAATTATGGCGC GACTGGCAAA GGAAG TTCGCCAGGC TTTTTCTGGTGTCCG yehP 2510512 - 2511648 + | hypothetical protein TERM 3435 2511693 - 2511712 + G 70 -4.2 -4.63218 | opp_overlap 2511679 2511676 2511675, overlap 2511694 ACGCCGCAGGCCCTG ACGGCGTT AAGC AATGCCGG TTTTGTTAAGCGCAG TERM 3436 2511865 - 2511897 + G 70 -5.5 -4.3208 | opp_overlap 2511845 2511843 AGTGCAGCTGCGGGG CCAGCGGCATGTG CCGCCAT CGCGTGATGCTGG TTTTAAGTTATCAGC TERM 3437 2513331 - 2513314 - g 93 -8.3 -4.93296 | TGATGATGACAAAAA CCCGCGC CTGG GCGCTGG ACGCAGAAACTGCGC yehQ 2511645 - 2513645 + | hypothetical protein TERM 3438 2513724 - 2513740 + F 90 -10.9 -4.33621 | opp_overlap 2513720 TATCCTATATAGCCC CTGGTGA GAG TCACCAG TTTCTTGATTAAATA TERM 3439 2513879 - 2513863 - g 79 -2.3 -5.2166 | GAAGAATCGAAAAAA TTCAG CGCCAAT CTGAA CGGTACTGAAATTGC yehR 2513770 - 2514231 + | hypothetical protein yehS 2514743 - 2514273 - | hypothetical protein yehT 2515509 - 2514790 - | response regulator in two-component system with YehU TERM 3440 2515158 - 2515178 + g 77 -3.2 -5.0538 | gap 1, overlap 2515158 2515159 CCTGCTTGCTGCGCT C-CTGACGC AATC GCGCCAGCG TTTTTTCCAGTCGCG yehU 2517191 - 2515506 - | sensory kinase in two-component system with YehT mlrA 2517413 - 2518144 + | DNA-binding transcriptional regulator yehW 2519023 - 2518292 - | putative transporter subunit: permease component of ABC superfamily transporter TERM 3441 2518715 - 2518691 - G 72 -8.5 -3.83026 | GGGTTGCAGACCAAA GCCGATCACCG GAA CGGCAATCGCC AGCACCGCAACGGGC yehX 2519954 - 2519028 - | putative transporter subunit: ATP-binding component of ABC superfamily transporter yehY 2521104 - 2519947 - | putative transporter subunit: permease component of ABC superfamily TERM 3442 2520495 - 2520471 - G 77 -2.7 -5.1101 | overlap 2520473 TGAGTAGCGAAAAAA TCGCCCCCTGC CGC GCAGTGGAAAA GTAGCACCAGACGCC TERM 3443 2521043 - 2521033 - G 74 -8.2 -3.97368 | overlap 2521034 CGCGTAACTGATAAA CGGC AGC GCCG CTGCGATTGCCGTCA yehZ 2522028 - 2521111 - | putative transporter subunit: periplasmic-binding component of ABC superfamily TERM 3444 2521188 - 2521205 + g 79 -3.5 -5.14563 | gap 1, overlap 2521184 CCACAGCAATGCTGG CATT-CAG TTG CTGCAATG TTTTTTCATCGAGGC TERM 3445 2522147 - 2522165 + r 74 -10.2 -3.15579 | opp_overlap 2522147 AGATAAATACTTAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC TERM 3446 2522165 - 2522147 - R 100 -12.4 -3.83927 | opp_overlap 2522147 AGATAAATACTTAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC bglX 2524474 - 2522177 - | beta-D-glucoside glucohydrolase, periplasmic TERM 3447 2522325 - 2522343 + g 75 -6.6 -4.37658 | CTGACGGTCTGAGTT TCGCCCGG TTT CAGGGTGA TTTTCTCAAAGCCTT TERM 3448 2525403 - 2525416 + G 70 -6.7 -4.01703 | opp_overlap 2525402, overlap 2525402 CCGCACGTTATAACG CCGAT CCGG ATCGG TTATTTGAATCTTCT dld 2524670 - 2526385 + | D-lactate dehydrogenase, FAD-binding, NADH independent TERM 3449 2526417 - 2526389 - T 83 -7.6 -4.74801 | gap 2, opp_overlap 2526390, overlap 2526390 2526392 GAAGTGGAGTAAAAA TTACGGATGGCAGA GTA TC-GCCATCCG-AA TTCACTTAATCGTTC TERM 3450 2526390 - 2526417 + T 70 -9.2 -3.22409 | gap 1, opp_overlap 2526389 2526390 2526392 AAGTGGAGTAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGAA TTCACTTAATCGTTC TERM 3451 2526417 - 2526390 - T 73 -9.2 -3.44158 | gap 1, opp_overlap 2526390, overlap 2526389 2526392 AAGTGGAGTAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGAA TTCACTTAATCGTTC TERM 3452 2526415 - 2526392 - T 85 -11.8 -3.28472 | gap 1, opp_overlap 2526390, overlap 2526389 2526390 GTGGAGTAAAAATTA CGGATGGCAGA GTA TC-GCCATCCG AATTCACTTAATCGT pbpG 2527355 - 2526423 - | D-alanyl-D-alanine endopeptidase TERM 3453 2526451 - 2526467 + g 100 -10.8 -5.8096 | overlap 2526435 GCCGTCTGCCCCGCC GCCGCC ATTTG GGCGGC TTTTTGTTTTTTATA TERM 3454 2526968 - 2526978 + g 81 -8.2 -4.3739 | opp_overlap 2526953, overlap 2526957 GGTGCGCAAGGCTTG CCGC CGC GCGG TTTTCTGAAGACATC TERM 3455 2527516 - 2527481 - R 100 -15.6 -3.75015 | AGAATCGTGAGGAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAACA CAAAAGTACTTTCTA yohC 2528116 - 2527529 - | conserved hypothetical protein; putative inner membrane protein yohD 2528286 - 2528864 + | conserved hypothetical protein; putative inner membrane protein TERM 3456 2528860 - 2528846 - T 80 -5.6 -5.06414 | GCGCGGGAAGAAAAA GCCGGA TAA TCAGGC ATAAAGCAGTTGCCA yohF 2529744 - 2528983 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain yohG 2530885 - 2529797 - | conserved hypothetical protein; putative outer membrane protein TERM 3457 2529883 - 2529869 - G 73 -9.2 -3.61398 | opp_overlap 2529879 2529880 CTGCCCTTGCAATAA CAGGCC ATT GGCCCG CTCGCGAAGCGCCGG TERM 3458 2530286 - 2530271 - G 70 -4.6 -4.46926 | GATGTCAGGATAAAA TGCCGC TTTT GCCGCA TCAATGGTGCTTAGC TERM 3459 2531685 - 2531646 - R 100 -16.4 -2.71364 | overlap 2531634 TCACTGGCGCAAGGA GCGCGCAGGGGGCGAC CAATCGCC GCCGCCCCCTGCACCC CCGGGCTCTGGCGAA dusC 2532860 - 2531913 - | tRNA-dihydrouridine synthase C TERM 3460 2532901 - 2532880 - H 95 -8.1 -5.42259 | gap 1, opp_overlap 2532883, overlap 2532881 2532883 TCACCCGCAAAAAAA TGAGGCGCTA TGT TAGCGCCT-A TGGTCAACGGATTAA TERM 3461 2532901 - 2532881 - H 79 -9.7 -3.84633 | opp_overlap 2532883, overlap 2532880 2532883 CACCCGCAAAAAAAT GAGGCGCTA TGT TAGCGCCTA TGGTCAACGGATTAA TERM 3462 2532899 - 2532883 - H 93 -12.3 -3.49966 | opp_overlap 2532883, overlap 2532880 2532881 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAACGGATT TERM 3463 2532883 - 2532899 + H 82 -12.3 -2.78715 | opp_overlap 2532883 2532880 2532881 CCCGCAAAAAAATGA GGCGCTA TGT TAGCGCC TATGGTCAACGGATT TERM 3464 2532928 - 2532955 + H 71 -9.8 -3.0281 | opp_overlap 2532928, overlap 2532923 2532930 2532938 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCATTCCCTC TCTATGCTTGATGTA TERM 3465 2532955 - 2532928 - H 75 -9.8 -3.56594 | opp_overlap 2532923 2532928 2532930 2532938 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCATTCCCTC TCTATGCTTGATGTA TERM 3466 2533155 - 2533174 + G 90 -9.3 -4.4959 | TTTCGTCCTGATTTA TGCCTGC CTGTAT GCAGGCA TTTTCATTGCTTCAC yohJ 2533099 - 2533497 + | conserved hypothetical protein; putative inner membrane protein TERM 3467 2533526 - 2533538 + G 74 -3.4 -5.00616 | GTGGTCATTACCGCT GACA TTGAT TGTC TTTTTTGCCGCCCGC yohK 2533494 - 2534189 + | conserved hypothetical protein; putative inner membrane protein TERM 3468 2534199 - 2534209 + F 80 -6.8 -4.82154 | overlap 2534194 GGCTAAAATTTGCGA TGCG TCG CGCA TTTTTGATGTAAGTT cdd 2534319 - 2535203 + | cytidine/deoxycytidine deaminase TERM 3469 2535271 - 2535287 + F 86 -10.9 -4.15044 | opp_overlap 2535269 TGGTGTCGAAAATCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC TERM 3470 2535944 - 2535954 + G 79 -4.6 -5.00884 | opp_overlap 2535944 CTTTATATTTTTAAA CGTG AAC CGCG TTTTTTAGGGCCGCT sanA 2535353 - 2536072 + | hypothetical protein TERM 3471 2536205 - 2536188 - g 75 -5.5 -4.60924 | opp_overlap 2536190, overlap 2536190 TAAACGGGTTAAAAA TGCACCG GAAC CGGTGTA TGTCTGGCGAGCAAA yeiS 2536075 - 2536314 + | conserved hypothetical protein; putative inner membrane protein TERM 3472 2536930 - 2536940 + G 85 -6.8 -4.76123 | CCCATTGATATCGGC CGCT TAC AGCG TTTTGTTACTGATTT yeiT 2536633 - 2537871 + | putative Fe-S cluster containing oxidoreductase subunit TERM 3473 2538368 - 2538357 - g 70 -5.8 -4.25104 | TGTCGGGCAGTAAAA CGTG GTTC CACG CTGCCAATGCTGGCG yeiA 2537865 - 2539100 + | putative oxidoreductase subunit TERM 3474 2539150 - 2539103 - T 74 -8.2 -4.11484 | overlap 2539106 TGTAACGTTGTAAAA CCAGCGACGCATCCGGCATTTG GCAC CGATTGCCGGATGCGACGCATC CGGCAATACCCACAA TERM 3475 2539147 - 2539106 - T 100 -18.7 -3.08776 | overlap 2539103 AACGTTGTAAAACCA GCGACGCATCCGGCATTTG GCAC CGATTGCCGGATGCGACGC ATCCGGCAATACCCA mglC 2540181 - 2539171 - | methyl-galactoside transporter subunit ; membrane component of ABC superfamily TERM 3476 2540206 - 2540243 + r 91 -8.5 -4.96848 | opp_overlap 2540210 2540212 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGTTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2541717 - 2540197 - | fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components TERM 3477 2541077 - 2541092 + g 78 -7.6 -4.38154 | opp_overlap 2541077 2541076 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGCGAGATAT TERM 3478 2541769 - 2541747 - R 100 -14.9 -3.88232 | opp_overlap 2541760, overlap 2541760 TTGGTCATACAATAA GGGCGCAGT AATAG ACTGCGCCC AATCAGTCTTATTTC mglB 2542776 - 2541778 - | methyl-galactoside transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3479 2541879 - 2541895 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAAATCA galS 2544096 - 2543056 - | DNA-binding transcriptional repressor yeiB 2545395 - 2544238 - | conserved hypothetical protein; putative inner membrane protein ECUMN_2485 2544086 - 2544289 + | hypothetical protein TERM 3480 2544625 - 2544607 - GT 75 -8.8 -3.8186 | CATTTGAAGTAAGAA GGCGCACC AGC GATACGCC CAGTCCAGCCGCCAT TERM 3481 2544991 - 2545007 + gT 85 -8 -4.59773 | CAGATAAAGCATGAC GCCTGT ATTAA ACAGGC TTTTTACCGATGGCG TERM 3482 2545298 - 2545328 + gT 73 -9.1 -3.44848 | gap 1, opp_overlap 2545301 2545302, overlap 2545296 2545302 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAGC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 3483 2545325 - 2545301 - GT 81 -10.8 -3.51924 | gap 1, opp_overlap 2545298 2545296 2545302, overlap 2545302 GCGGGATTGAGATAA GCCGCCTTTGG TAGC CCAAAGGCG-C TGATGTTTAATAGCA TERM 3484 2545302 - 2545325 + gT 75 -11 -2.87501 | opp_overlap 2545301 2545302, overlap 2545298 2545296 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA TERM 3485 2545325 - 2545302 - GT 74 -11 -2.7094 | opp_overlap 2545302 2545298 2545296, overlap 2545301 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA folE 2546080 - 2545412 - | GTP cyclohydrolase I ECUMN_2488 2546234 - 2546410 + | hypothetical protein TERM 3486 2546627 - 2546640 + GT 70 -3.7 -4.70583 | ATGGCTACGATTTAG GCCAG GGCG CAGGC TTTTATCTTAATGCC TERM 3487 2547142 - 2547159 + GT 71 -8.4 -3.4582 | TTTATAGAGGATCAC CTGCGC TTCCAT GCGCAG TATTTACTGAAGTGA frmC 2546338 - 2547174 + | S-formylglutathione hydrolase TERM 3488 2547181 - 2547196 + T 79 -11.8 -2.56271 | opp_overlap 2547177 2547178, overlap 2547180 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA cirA 2549185 - 2547206 - | ferric iron-catecholate outer membrane transporter TERM 3489 2547567 - 2547588 + g 72 -5.9 -4.30448 | overlap 2547580 TAGTTGAGTGACAGT TTCCATTCA TCGT TGAACGGAA TTTTCAGTTCGGTTT ECUMN_2491 2549381 - 2549178 - | hypothetical protein TERM 3490 2549456 - 2549437 - R 100 -13.6 -4.75776 | AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA lysP 2550947 - 2549478 - | lysine transporter TERM 3491 2549815 - 2549803 - G 72 -6.2 -4.40358 | AGCCAGGCGATAAAA CCGG TCATC CCGG AGGTGTTCAGCAGCC TERM 3492 2550375 - 2550340 - G 70 -6.8 -4.08945 | gap 1, opp_overlap 2550350 2550351, overlap 2550351 ATCATCGCCGCAAAA CCACCAG-CAAACGGCG CTT CGCCGATTGTCCAGTTG CTCCAGCCCGCAGGC TERM 3493 2550363 - 2550351 - G 84 -10.5 -3.83705 | opp_overlap 2550350 2550351, overlap 2550340 AAAACCACCAGCAAA CGGCG CTT CGCCG ATTGTCCAGTTGCTC yeiE 2552033 - 2551152 - | putative DNA-binding transcriptional regulator TERM 3494 2552829 - 2552803 - g 75 -6.6 -4.42386 | CCCGGATGCAGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 3495 2553101 - 2553083 - g 74 -2.2 -5.09225 | AGCGCACTGAAAAAA GCCGGGGC GAA ACCTCTGC TGATGGCACTGGTAC yeiH 2552132 - 2553181 + | conserved hypothetical protein; putative inner membrane protein nfo 2553255 - 2554112 + | endonuclease IV with intrinsic 3'-5' exonuclease activity TERM 3496 2554516 - 2554500 - g 82 -9.3 -4.15044 | opp_overlap 2554498 2554505 TGCTCCTGGAAGAAA CGCGCCG CGC CGGCGTG AATGTCTCCGGCTGC yeiI 2554115 - 2555203 + | putative kinase yeiJ 2556560 - 2555310 - | putative sodium/proton nucleoside transporter TERM 3497 2555771 - 2555788 + g 70 -6.9 -4.08216 | ATGCCATCACCACTG TCGCCAC ACCT GCGGCGA TTTTCAGCCCGGTCA TERM 3498 2555934 - 2555919 - G 78 -9 -3.9122 | overlap 2555906 CAGGCGGGCAAACAA GATCCC GCCG GGGATC GCCATTAACGATGCC TERM 3499 2556648 - 2556613 - R 93 -11.8 -3.96148 | opp_overlap 2556615, overlap 2556615 TCTGCCCATCAGAAA TAGCCGGGCCTGCATC TTGC GATACTGACCCGGCTT GTTATCAACACTTAA TERM 3500 2556615 - 2556646 + r 80 -10 -3.79678 | opp_overlap 2556615 2556613 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGACCCGGC TTGTTATCAACACTT TERM 3501 2556646 - 2556615 - R 100 -14.4 -3.57406 | opp_overlap 2556615, overlap 2556613 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGACCCGGC TTGTTATCAACACTT rihB 2557601 - 2556660 - | ribonucleoside hydrolase 2 TERM 3502 2556714 - 2556737 + g 90 -11.8 -3.92324 | opp_overlap 2556714 2556711 TAATCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTGGTATTAGCGGG TERM 3503 2556908 - 2556925 + g 77 -6.3 -4.62336 | overlap 2556895 GGCCGCCAGCCAGGC CGTAGTT TTCG AACTGCG TTTTTAGAGTGAAAT TERM 3504 2557808 - 2557834 + G 71 -2.1 -5.02074 | opp_overlap 2557808, overlap 2557813 TTGCTTTTCAACGGA TGTTTCAGCCG ATACG CGGCTGTTTCA TTTTTTAGCGCGTGA TERM 3505 2557813 - 2557829 + G 86 -9.4 -4.42765 | opp_overlap 2557808, overlap 2557808 TTTCAACGGATGTTT CAGCCG ATACG CGGCTG TTTCATTTTTTAGCG TERM 3506 2557872 - 2557886 + G 82 -7.8 -4.52589 | GTGCAGGAAGGGCAA CAGCCG TCC TGGCTG TTTTATCTGACGCGA yeiL 2557770 - 2558429 + | DNA-binding transcriptional activator of stationary phase nitrogen survival yeiM 2559747 - 2558497 - | putative sodium/proton nucleoside transporter TERM 3507 2559237 - 2559283 + g 83 -10.2 -4.07568 | overlap 2559240 CCGTAAACAACTCGT TGCGATTCATGCGATCGATAAA CGG TTTAACGATCGCCGGGATCTCA TTTTGCCCGAGGAAA TERM 3508 2559240 - 2559280 + g 72 -10.5 -3.08032 | overlap 2559237 TAAACAACTCGTTGC GATTCATGCGATCGATAAA CGG TTTAACGATCGCCGGGATC TCATTTTGCCCGAGG TERM 3509 2559735 - 2559752 + g 70 -5.7 -4.30014 | TCCCCACAACACTTC TCATTAT ATCC ATAATGA TTTTCCCTTCATGCC TERM 3510 2559774 - 2559791 + r 84 -8.3 -4.39287 | opp_overlap 2559774 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA TERM 3511 2559791 - 2559774 - R 80 -10.5 -3.74693 | opp_overlap 2559774 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA yeiN 2560779 - 2559841 - | hypothetical protein TERM 3512 2559880 - 2559892 + g 73 -9.1 -3.61517 | opp_overlap 2559888 TTTGGCAATTTCGCT CGCCA GAA TGGCG TTGTTGAACACCAGT TERM 3513 2560435 - 2560456 + g 74 -2.9 -5.00616 | opp_overlap 2560431, overlap 2560431 CGCAATAATCATCGT TGAAGCAAC GGTA GTTGCGCCA TTTTTTCCGGCGGCA yeiC 2561708 - 2560767 - | putative kinase TERM 3514 2561512 - 2561540 + g 72 -6.8 -4.15044 | gap 1, opp_overlap 2561512 2561515 GATTGACCATAAAAA TCACTGCCTACTG CGCT CAGTAGCCAG-GA TTTATTCCCCAGCAA TERM 3515 2561540 - 2561512 - G 86 -6.8 -4.9218 | gap 1, opp_overlap 2561512, overlap 2561515 GATTGACCATAAAAA TCACTGCCTACTG CGCT CAGTAGCCAG-GA TTTATTCCCCAGCAA TERM 3516 2561974 - 2561955 - R 100 -9.3 -5.66229 | AGGAACAATAAAAAA GGGCAGA AATTAA TCTGCCC TTGAGGAAATAACCT TERM 3517 2562086 - 2562126 + r 78 -6.1 -4.66318 | opp_overlap 2562090, overlap 2562087 2562088 TCTCTTTGCGCGCAT CAAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACACC TTTTATTACGCTGCT TERM 3518 2562087 - 2562125 + r 74 -9.6 -3.39068 | opp_overlap 2562090, overlap 2562086 2562088 CTCTTTGCGCGCATC AAATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACAC CTTTTATTACGCTGC TERM 3519 2562088 - 2562124 + r 84 -13.1 -2.62958 | opp_overlap 2562090, overlap 2562087 2562086 TCTTTGCGCGCATCA AATGTTACAGGGCAGGA AAT TTCTGCCCTGTAACACA CCTTTTATTACGCTG TERM 3520 2562122 - 2562090 - R 100 -17.9 -3.72576 | opp_overlap 2562088 2562087 2562086 TTTGCGCGCATCAAA TGTTACAGGGCAGGA AAT TTCTGCCCTGTAACA CACCTTTTATTACGC fruA 2563823 - 2562132 - | fused fructose-specific PTS enzymes: IIBcomponent ; IIC components fruK 2564778 - 2563840 - | fructose-1-phosphate kinase fruB 2565908 - 2564778 - | fused fructose-specific PTS enzymes: IIA component ; HPr component TERM 3521 2565923 - 2565943 + H 77 -10.5 -3.48276 | TAGTTCTCCTCTCTT GCTGAATTG AAA CGATTCAGC TTCTATGAGAAAAAA TERM 3522 2565996 - 2565960 - H 89 -2.9 -5.67063 | overlap 2565961 2565962 TCTATGAGAAAAAAA GCGCCAACCTGGCTT AGGGTTA AAGACAAGATCGCGC TGAAACGTTTCAAGA setB 2566276 - 2567457 + | lactose/glucose efflux system ECUMN_2507 2567840 - 2567454 - | hypothetical protein TERM 3523 2567687 - 2567668 - Gg 72 -10 -3.27525 | gap 1, overlap 2567663 2567682 GGGCTGGAAATTGAA GGGGCAGTG CAA CAC-GCCCC GCAACCCGGACGGCA ECUMN_2508 2567608 - 2568435 + | putative elongation factor TERM 3524 2568456 - 2568475 + FH 100 -10 -5.46129 | opp_overlap 2568456 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA TERM 3525 2568475 - 2568456 - fH 79 -7.8 -4.42386 | opp_overlap 2568456 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA yeiQ 2568658 - 2570124 + | putative sugar dehydrogenase, NAD-dependent TERM 3526 2570166 - 2570142 - f 77 -10 -3.53091 | opp_overlap 2570135 ATTTCTGCGGTTAAA GCGGATGAAG CTCGC CTTCGTCCGC TCCCCCCTTCTCTTT yeiR 2570242 - 2571228 + | putative enzyme TERM 3527 2571288 - 2571278 - g 73 -4 -4.81734 | opp_overlap 2571278 AAATATGATTAAAAA TTTG CCG CAAA TAGTGTTGTTGAATA TERM 3528 2571528 - 2571518 - g 75 -4.6 -4.86731 | CTGGCTGAAAGAAAA CGCC CCT GGCA GACGACGTATCGTGA yeiU 2571267 - 2571980 + | undecaprenyl pyrophosphate phosphatase TERM 3529 2572329 - 2572340 + F 86 -2.2 -5.61596 | AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT TERM 3530 2572868 - 2572881 + G 70 -6.7 -4.08557 | overlap 2572867 GTTTGTCCATGCTTC CACCA GCAG TGGTG TTATTATTTCCAGCA spr 2572392 - 2572958 + | putative peptidase, outer membrane lipoprotein TERM 3531 2573008 - 2573025 + F 100 -11.3 -5.85244 | opp_overlap 2573008 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3532 2573025 - 2573008 - f 91 -11.3 -3.77219 | opp_overlap 2573008 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3533 2573629 - 2573614 - g 72 -7.5 -3.90048 | CTTTGCTGAAAAATA GCGGC GTCTTT GCCGC GCTGAATCTCAACCT TERM 3534 2573843 - 2573855 + G 70 -4.1 -4.72272 | CTGGACATGGAACGA TGTGT GGT ACGCA TTTTTACTGGGCGGC TERM 3535 2574354 - 2574333 - g 74 -8.7 -3.8613 | CTGAAAGAGCAAGAA GCCACGCAA CTCT TTGCCTGGC TGCACTCGGTCGGCG TERM 3536 2574421 - 2574439 + G 71 -9.6 -3.50447 | overlap 2574409 2574433 GCGCGCTTATCTACC TTGAGCGT TTT ACGCTCGA TTATCTGAAAATTGA rtn 2573139 - 2574695 + | hypothetical protein TERM 3537 2574861 - 2574887 + G 74 -7.9 -4.06055 | GAAAGCTATGCCTTT GCCGTGCTGGG CGAAC CCCGGTACGCC TTTAATTTCAACCAT yejA 2574777 - 2576591 + | putative oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily transporter TERM 3538 2577437 - 2577482 + G 80 -5.3 -5.02074 | overlap 2577450 TGTGTTCCGCAACGC CATGCTGCTGGTGATTGCCGG TTTT CCGGCGACGTTTATCAGCATG TTTTTTACCGGCTCG yejB 2576592 - 2577686 + | putative oligopeptide transporter subunit; permease component of ABC superfamily yejE 2577686 - 2578711 + | putative oligopeptide transporter subunit ; permease component of ABC superfamily transporter yejF 2578713 - 2580302 + | putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components yejG 2580650 - 2580306 - | hypothetical protein TERM 3539 2580967 - 2580950 - R 76 -7.7 -4.26202 | opp_overlap 2580950 ACATGCATCAACAAA GGAAGCC TTTT AGCTTCC TCGTTGTGCAATAGA bcr 2582173 - 2580983 - | bicyclomycin/multidrug efflux system rsuA 2582896 - 2582201 - | 16S rRNA pseudouridylate 516 synthase yejH 2583046 - 2584806 + | putative nucleic acid ATP-dependent helicase rplY 2584931 - 2585215 + | 50S ribosomal subunit protein L25 TERM 3540 2585231 - 2585260 + T 100 -15.9 -2.90219 | opp_overlap 2585238, overlap 2585238 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCG GCGGGGTTTTTTG TCTCTGCAAATTATG TERM 3541 2585238 - 2585253 + T 100 -11.8 -5.4251 | opp_overlap 2585238, overlap 2585231 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA TERM 3542 2585253 - 2585238 - T 100 -11.8 -5.06103 | opp_overlap 2585238 2585231 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA TERM 3543 2585391 - 2585350 - T 71 -3.8 -4.74285 | gap 2, opp_overlap 2585373, overlap 2585351 ATTCAGAACACAAAA CCGATTAATTGC--CGCCAG ACGT CCGGCGCTGCAATTGATCGC GCAAATTCGGCGGCG yejK 2586361 - 2585354 - | nucleotide associated protein TERM 3544 2586503 - 2586492 - H 100 -5.8 -6.04378 | opp_overlap 2586492 2586502 AAAGCAGAAAAAAAA CCGT TGCT ACGG TAATATGTTGCCCTT yejL 2586543 - 2586770 + | hypothetical protein TERM 3545 2587188 - 2587222 + G 81 -6.5 -4.78572 | gap 1, overlap 2587191 AAATGAGATGGCGCG CGACTGGCA-GCTGAT GTTC ATCAGCGTGCCGGTTA TTTTATTGCTTGAAC TERM 3546 2587191 - 2587219 + G 93 -10.4 -4.48997 | gap 1, overlap 2587188 TGAGATGGCGCGCGA CTGGCA-GCTGAT GTTC ATCAGCGTGCCGG TTATTTTATTGCTTG TERM 3547 2587300 - 2587266 - g 70 -7.1 -4.09685 | opp_overlap 2587298 2587299 GTGGAGCTGGCAAAA GCTGCGCAGC-CTGACG CGT CGTCGGCGCTTCGC-GC GCCCGCTGGCCGCAT TERM 3548 2587627 - 2587640 + G 76 -8.1 -4.25104 | opp_overlap 2587620 2587625, overlap 2587639 TTCGAGAAGCAGATG CCTGC GCTG GCAGG TTTTGCTGAGCAAAA yejM 2586790 - 2588550 + | putative hydrolase, inner membrane-associated TERM 3549 2588718 - 2588734 + T 100 -8 -6.06529 | opp_overlap 2588718 AAATCCCAAAAAAAA CCAACC TTTAC GGTTGG TTTTTTTTATATCTG TERM 3550 2588734 - 2588718 - T 100 -8 -5.82388 | opp_overlap 2588718 AAATCCCAAAAAAAA CCAACC TTTAC GGTTGG TTTTTTTTATATCTG TERM 3551 2588762 - 2588793 + T 91 -10.2 -4.73682 | opp_overlap 2588766, overlap 2588766 CTGCATTTAATTCGA TAAACAGACCGCGA CACA TCACGGCCTGTTTA TTTTCTGTTATCAGA TERM 3552 2588789 - 2588766 - T 86 -11 -3.9279 | opp_overlap 2588766 2588762 ATTTAATTCGATAAA CAGACCGCGA CACA TCACGGCCTG TTTATTTTCTGTTAT TERM 3553 2588766 - 2588789 + T 82 -6.6 -4.89519 | opp_overlap 2588766, overlap 2588762 ATTTAATTCGATAAA CAGACCGCGA CACA TCACGGCCTG TTTATTTTCTGTTAT yejO 2591314 - 2588804 - | putative autotransporter outer membrane protein; type V secretion TERM 3554 2589543 - 2589570 + g 70 -9.8 -3.23853 | overlap 2589541 TGCTCAAAGCCAGCT CCCGCATCAGTG GTCA CGTTGTTGCGGG TGTTAATTGCCGAAC narP 2591715 - 2592362 + | DNA-binding response regulator in two-component regulatory system with NarQ or NarX TERM 3555 2592366 - 2592393 + T 91 -6.3 -5.35815 | gap 1, opp_overlap 2592366 2592368, overlap 2592367 2592368 GGGGCACAATAAAAA TA-GCCCGATGG CATCA CCATCGGGCCTC TTTTTATTTACTCTC TERM 3556 2592392 - 2592366 - T 100 -10.8 -5.18726 | opp_overlap 2592366 2592367 2592368, overlap 2592368 GGGGCACAATAAAAA TAGCCCGATGGC ATC ACCATCGGGCCT CTTTTTATTTACTCT TERM 3557 2592367 - 2592391 + T 93 -11.4 -4.29436 | opp_overlap 2592366 2592368, overlap 2592366 2592368 GGGCACAATAAAAAT AGCCCGATGG CATCA CCATCGGGCC TCTTTTTATTTACTC TERM 3558 2592368 - 2592390 + T 95 -14.9 -3.16035 | opp_overlap 2592368 2592366, overlap 2592367 2592366 GGCACAATAAAAATA GCCCGATGG CATCA CCATCGGGC CTCTTTTTATTTACT TERM 3559 2592390 - 2592368 - T 100 -15.6 -4.22377 | opp_overlap 2592367 2592366 2592368, overlap 2592366 GGCACAATAAAAATA GCCCGATGGC ATC ACCATCGGGC CTCTTTTTATTTACT ccmH 2593449 - 2592397 - | heme lyase, CcmH subunit TERM 3560 2593456 - 2593444 - G 77 -3.3 -5.07486 | CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT ccmG 2594003 - 2593446 - | periplasmic thioredoxin of cytochrome c-type biogenesis ccmF 2595943 - 2594000 - | heme lyase, CcmF subunit ccmE 2596419 - 2595940 - | periplasmic heme chaperone ccmD 2596625 - 2596416 - | cytochrome c biogenesis protein TERM 3561 2596583 - 2596572 - G 95 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2597359 - 2596622 - | heme exporter subunit ; membrane component of ABC superfamily TERM 3562 2596779 - 2596744 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2596744 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2598063 - 2597401 - | heme exporter subunit ; membrane component of ABC superfamily TERM 3563 2597532 - 2597516 - G 81 -10.8 -3.57797 | GGCAAATGCATAGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG ccmA 2598683 - 2598060 - | heme exporter subunit ; ATP-binding component of ABC superfamily napC 2599298 - 2598696 - | nitrate reductase, cytochrome c-type,periplasmic TERM 3564 2599122 - 2599148 + g 81 -6.6 -4.66163 | ACGCATTTCGTGGCA GCTAATGCAGAA CTC TTCGGTATTGGC TTTTTCCATCCCGGT napB 2599757 - 2599308 - | nitrate reductase, small, cytochrome C550 subunit, periplasmic napH 2600617 - 2599754 - | ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) TERM 3565 2600090 - 2600066 - G 86 -3.5 -5.35815 | overlap 2600080 TAGATCAAATAAAAA CAGCGCG AGAATAAGCAG CGCGCCG CTGCCGAATCCCATT TERM 3566 2600094 - 2600080 - G 88 -11.4 -3.80174 | overlap 2600066 ACAGCGCGAGAATAA GCAGCG CGC CGCTGC CGAATCCCATTACCA TERM 3567 2600566 - 2600550 - G 70 -10.1 -3.13432 | opp_overlap 2600549 2600550 2600554, overlap 2600545 2600542 2600530 CGTAACACCAGCCAA CGGTGGC TGC GCCACCA GCCTTTTTTCTCCAG TERM 3568 2600554 - 2600569 + g 93 -6.1 -5.24129 | opp_overlap 2600545 2600542 2600530 2600550, overlap 2600550 2600549 ACACCAGCCAACGGT GGCTG CGCCAC CAGCC TTTTTTCTCCAGCGC napG 2601299 - 2600604 - | ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) TERM 3569 2601161 - 2601192 + g 81 -12.4 -3.21276 | gap 1, overlap 2601165 TGGCTCCGGGCGGGC GCAA-CCGCACGC CAGATGC GCGTGCGGTTTGC TGTTGTAACCCCAGC TERM 3570 2601165 - 2601187 + g 90 -12 -3.97088 | overlap 2601161 TCCGGGCGGGCGCAA CCGCACGC CAGATGC GCGTGCGG TTTGCTGTTGTAACC napA 2603792 - 2601306 - | nitrate reductase, periplasmic, large subunit napD 2604052 - 2603789 - | assembly protein for periplasmic nitrate reductase napF 2604536 - 2604042 - | ferredoxin-type protein, putative role in electron transfer to periplasmic nitrate reductase (NapA) TERM 3571 2604679 - 2604669 - g 70 -6.8 -4.08767 | CCGATCGGGGTAAAA CCTG TAG CAGG ATCAAAAGAGTGGCG ECUMN_2544 2604636 - 2604809 + | hypothetical protein TERM 3572 2605064 - 2605032 - g 77 -3.4 -5.05782 | AGCCACTGGAAAAAA TCGCGCCTTATCCA CAAGC TGAAAAAGGCATGA AGCGTCAGGTGATTC eco 2604944 - 2605432 + | ecotin, a serine protease inhibitor TERM 3573 2605540 - 2605576 + T 100 -18.1 -2.71011 | opp_overlap 2605542 CGCGTCTTATCAGCA TACGCCACATCCGGCAT ACC ATGCCGGATGTGGCACA TCATTACAACGCAAT TERM 3574 2605574 - 2605542 - T 100 -22.9 -2.82516 | opp_overlap 2605540 CGTCTTATCAGCATA CGCCACATCCGGCAT ACC ATGCCGGATGTGGCA CATCATTACAACGCA mqo 2607226 - 2605580 - | malate dehydrogenase, FAD/NAD(P)-binding domain TERM 3575 2606634 - 2606644 + g 72 -6.8 -4.19624 | CCAATTTCCGTACGC GTGG CTG CCAC TTTCTGTTGCGGATC TERM 3576 2606858 - 2606828 - G 78 -8.2 -4.25458 | overlap 2606829 2606850 AACGGTATTAATAAA TGAACGTGGGGTTC GCA GCACACCACGTTCG ACCTGGTGTGCCCAA TERM 3577 2606857 - 2606829 - G 77 -11.7 -3.14552 | overlap 2606828 2606850 ACGGTATTAATAAAT GAACGTGGGGTTC GCA GCACACCACGTTC GACCTGGTGTGCCCA TERM 3578 2607433 - 2607403 - R 82 -12.6 -2.79183 | opp_overlap 2607399 2607395 2607393 GGGATTTTTAGCATA TTGACCTGGCGG CAGCAGT CCGCCAGGTCAG CGTCGTAATATTATG yojI 2609087 - 2607444 - | fused multidrug transport subunits of ABC superfamily transporter: permease component/ATP-binding component TERM 3579 2607709 - 2607719 + g 79 -2.4 -5.28826 | opp_overlap 2607682 2607708 2607710, overlap 2607700 GCCAGCGCCAGCAAC AGCG CGA CGCG TTTTTTCTGCCCTTT alkB 2609813 - 2609163 - | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions ada 2610877 - 2609813 - | fused DNA-binding transcriptional dual regulator ; O6-methylguanine-DNA methyltransferase yojL 2612006 - 2610951 - | putative thiamine biosynthesis lipoprotein; defective assembly or repair of ThiH Fe-S cluster TERM 3580 2612103 - 2612076 - R 83 -12.8 -3.10622 | opp_overlap 2612083, overlap 2612083 TACGCTGAAAACAAT GAAAAAAGGGCC CGCA GGCCCTTTGTTC GATATCAATCGAGAT TERM 3581 2612083 - 2612096 + r 84 -9.5 -4.23213 | opp_overlap 2612076 2612083 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA TERM 3582 2612096 - 2612083 - R 100 -9.5 -5.43514 | opp_overlap 2612083, overlap 2612076 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA ompC 2613221 - 2612118 - | outer membrane porin protein C TERM 3583 2613622 - 2613640 + H 100 -14.6 -5.81032 | TTACCCCTATTTCAA CCGGATGC CTC GCATCCGG TTTTTTTTACCCTTC TERM 3584 2615327 - 2615301 - g 70 -5 -4.56978 | opp_overlap 2615309 CTGGTAAACAAGAAA CTCAAGCAGGCG CAG CGTCTGTATGAG AAAAACCAGCAGGGG rcsD 2613960 - 2616632 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC rcsB 2616649 - 2617299 + | DNA-binding response regulator in two-component regulatory system with RcsC and YojN TERM 3585 2617309 - 2617342 + T 77 -9.5 -3.61178 | opp_overlap 2617319 2617321 2617322, overlap 2617310 2617321 2617322 GACTAATCACCTGTA GGCCAGATAAGACGC GTCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 3586 2617310 - 2617341 + T 85 -13 -2.76492 | opp_overlap 2617319 2617321 2617322, overlap 2617309 2617321 2617322 ACTAATCACCTGTAG GCCAGATAAGACGC GTCA GCGTCGCATCTGGC ATTTGCACTGAATGC TERM 3587 2617321 - 2617375 + T 100 -15 -3.30124 | opp_overlap 2617319 2617321 2617322 2617354, overlap 2617310 2617309 2617322 GTAGGCCAGATAAGA CGCGTCAGCGTCGCATCTGGCATTTG CAC TGAATGCCGGATGCGGCGTAAACGCC TTATCCGGCCTACGA TERM 3588 2617375 - 2617321 - T 71 -9.2 -3.32698 | opp_overlap 2617310 2617309 2617321 2617322, overlap 2617319 2617322 2617354 GTAGGCCAGATAAGA CGCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCGGATGCGGCGTAAACGCC TTATCCGGCCTACGA TERM 3589 2617374 - 2617322 - T 81 -12.7 -2.59298 | opp_overlap 2617310 2617309 2617321 2617322, overlap 2617319 2617321 2617354 TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCGGATGCGGCGTAAACGC CTTATCCGGCCTACG TERM 3590 2617322 - 2617374 + T 100 -18.5 -2.57931 | opp_overlap 2617319 2617322 2617321 2617354, overlap 2617310 2617309 2617321 TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATTTG CAC TGAATGCCGGATGCGGCGTAAACGC CTTATCCGGCCTACG TERM 3591 2617385 - 2617354 - T 73 -10 -3.06183 | opp_overlap 2617322 2617321, overlap 2617322 2617321 GGCATTTGCACTGAA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACGATTCCCATTAT TERM 3592 2617459 - 2617420 - T 70 -5.6 -4.35885 | opp_overlap 2617423 2617424 2617433 2617437, overlap 2617421 2617423 2617433 ATGGATTACAACAAA GTAGGCCAGATAAGACGC ACCA GCGTCGCATCTGGCATTT GCACTGAATGCCAGA TERM 3593 2617458 - 2617421 - T 70 -9.1 -3.20808 | opp_overlap 2617423 2617424 2617433 2617437, overlap 2617420 2617423 2617433 TGGATTACAACAAAG TAGGCCAGATAAGACGC ACCA GCGTCGCATCTGGCATT TGCACTGAATGCCAG TERM 3594 2617456 - 2617423 - T 83 -11.7 -3.16079 | opp_overlap 2617423 2617424 2617433 2617437, overlap 2617421 2617420 2617433 GATTACAACAAAGTA GGCCAGATAAGACGC ACCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 3595 2617423 - 2617456 + T 77 -9.5 -3.61178 | opp_overlap 2617421 2617420 2617423 2617433, overlap 2617424 2617433 2617437 GATTACAACAAAGTA GGCCAGATAAGACGC ACCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 3596 2617424 - 2617455 + T 85 -13 -2.76492 | opp_overlap 2617423 2617421 2617420 2617433, overlap 2617423 2617433 2617437 ATTACAACAAAGTAG GCCAGATAAGACGC ACCA GCGTCGCATCTGGC ATTTGCACTGAATGC TERM 3597 2617489 - 2617433 - T 77 -10.4 -3.51137 | gap 2, opp_overlap 2617424 2617423 2617433 2617437, overlap 2617423 2617421 2617420 AAGTAGGCCAGATAA GACGCACCAGCGTCGCATCTGGCATT TGCACTG AATGCCAGATGCGGCG-TAA-ACGTC TTATACAGCCTACGA rcsC 2620300 - 2617499 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 3598 2619966 - 2619945 - G 75 -4.5 -4.8543 | gap 1, overlap 2619949 TAAGCCGCAGAAAAA TTATCGCGCC AGT AGCGC-ATAA ACCACGCCAATGACT ECUMN_2556 2620418 - 2620621 + | hypothetical protein TERM 3599 2621683 - 2621641 - gf 86 -9 -4.41348 | overlap 2621645 CTGCCCGCAAAGAAA CCCAGCGCCGCATGGCGC AAGCAGA ACGCCTCGCCACACTGGG TGAGCTGATGGCTGG TERM 3600 2622177 - 2622167 - gf 91 -5.4 -5.40072 | opp_overlap 2622167 CTCGCTGCAAAAAAA GATC TTC GATC CCTTTTTCACCACCA atoS 2620515 - 2622341 + | sensory histidine kinase in two-component regulatory system with AtoC atoC 2622338 - 2623723 + | fused response regulator of ato opeon, in two-component system with AtoS: response regulator ; sigma54 interaction protein TERM 3601 2623732 - 2623778 + F 73 -10.2 -3.05496 | opp_overlap 2623732 2623733, overlap 2623748 TGTATAACGCCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCGC TCATTCTTCTTATAA TERM 3602 2623777 - 2623732 - f 100 -13.5 -4.21936 | gap 1, opp_overlap 2623732 2623748, overlap 2623733 TGTATAACGCCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCC-G CTCATTCTTCTTATA TERM 3603 2623777 - 2623733 - f 87 -13.7 -3.1268 | opp_overlap 2623732 2623748, overlap 2623732 GTATAACGCCAAAAC TTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCG CTCATTCTTCTTATA atoD 2623919 - 2624581 + | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit atoA 2624581 - 2625231 + | acetyl-CoA:acetoacetyl-CoA transferase, beta subunit TERM 3604 2625244 - 2625259 + G 75 -6.8 -4.3739 | TGATTGGTCGCATAT CGCGTT TTAT GACGCG TTTTGTCAGCCGGTG TERM 3605 2625521 - 2625503 - g 82 -11.7 -3.53012 | opp_overlap 2625498 2625496 CGCCTCCGCCGCAAA GACGCCC GTACA GGGCGTC ATGCTGGTTACTTTC TERM 3606 2625732 - 2625720 - g 72 -10.5 -3.01712 | CTGTTGGCTGCAACA CCGGG CAA CCCGG TTGAGCATATCGCCG atoE 2625228 - 2626550 + | short chain fatty acid transporter atoB 2626581 - 2627765 + | acetyl-CoA acetyltransferase TERM 3607 2627810 - 2627766 - T 80 -11 -3.3482 | gap 1, opp_overlap 2627776 2627778, overlap 2627776 GAACGGTTGAATTAA TCAATAAAAACACCCGATAGC GAAA GTTATCGGGCGTTTTC-TTGA ACATCGACGGCGAAG TERM 3608 2627801 - 2627776 - T 100 -9.7 -5.20534 | opp_overlap 2627776 2627778, overlap 2627766 ATTAATCAATAAAAA CACCCGATAGC GAAA GTTATCGGGCG TTTTCTTGAACATCG TERM 3609 2627776 - 2627801 + T 91 -9.7 -4.64676 | opp_overlap 2627766 2627776, overlap 2627778 ATTAATCAATAAAAA CACCCGATAGC GAAA GTTATCGGGCG TTTTCTTGAACATCG TERM 3610 2627778 - 2627799 + T 74 -10.9 -2.62512 | opp_overlap 2627776 2627766, overlap 2627776 TAATCAATAAAAACA CCCGATAGC GAAA GTTATCGGG CGTTTTCTTGAACAT yfaP 2628615 - 2627839 - | hypothetical protein TERM 3611 2628073 - 2628085 + g 82 -7.7 -4.57073 | CGTGACATCCATATC CAGTG CAC CACTG TTTTTCAGCACGGTG TERM 3612 2628517 - 2628488 - G 70 -3.6 -4.60041 | gap 2, overlap 2628489 ATCGATTGTGAAAAA CTGGCATCTTCGCC CTCT GCCG--GATGCCAG CCAGAGAGCGGTGCG yfaQ 2630269 - 2628620 - | hypothetical protein TERM 3613 2628858 - 2628873 + g 95 -6 -5.40072 | opp_overlap 2628858, overlap 2628859 TCGCCTTGTAATATA CGCCGC CACT GCGGCA TTTTTTTCGCCAGCC TERM 3614 2628859 - 2628872 + g 76 -9.5 -3.83561 | opp_overlap 2628858, overlap 2628858 CGCCTTGTAATATAC GCCGC CACT GCGGC ATTTTTTTCGCCAGC TERM 3615 2629154 - 2629144 - G 70 -6.8 -4.05446 | opp_overlap 2629147, overlap 2629146 2629147 CTGGCGAAGCAGAAA CACG CTG CGTG GCGCTGCTGTCGGGG TERM 3616 2629228 - 2629215 - G 74 -3.1 -5.00616 | gap 1, opp_overlap 2629224, overlap 2629217 TTTTGCTGTAAAAAA GT-GCG AAT CGCCAC GGTCATGGCTTTCGC TERM 3617 2630168 - 2630194 + g 76 -10.8 -3.29829 | overlap 2630169 CAGCTGATACAGTTG ATCGTGCTGCGC ACC GCGCAGCACCAG TTGTAACGGCGTCTC TERM 3618 2630169 - 2630193 + g 84 -14.3 -2.57683 | overlap 2630168 AGCTGATACAGTTGA TCGTGCTGCGC ACC GCGCAGCACCA GTTGTAACGGCGTCT ECUMN_2565 2634889 - 2630270 - | putative large extracellular alpha-helical protein TERM 3619 2630545 - 2630563 + gr 71 -10.2 -2.72344 | opp_overlap 2630544 TTGTGCGCTCAACAT CGGCTCCC GGC GGGAGCGG TACTTCCACCTGACC TERM 3620 2631378 - 2631399 + gr 74 -10.9 -2.79302 | GGCATGTTATCTGCC TGCTCGGCA TAAC TGTCGAGCA TATGCTGCCAGTAAT TERM 3621 2633906 - 2633893 - GR 71 -2.3 -4.96848 | overlap 2633894 TCTCGGAGACAAAAA CGCCG CCTT CAGCA TCTTTACCCAGAATG TERM 3622 2634228 - 2634244 + gr 70 -6.5 -4.15106 | GGCGAGATGAAATTG CTGGATG CAC CTTCCAG TTTTACCCCTTGCTG yfaT 2635431 - 2634808 - | hypothetical protein TERM 3623 2635025 - 2635039 + gr 91 -11.4 -4.08706 | opp_overlap 2635018 AAAAAAATCATATCG CCAGGC AGC GCCTGG TTTATGTCCTGGCCA yfaA 2637116 - 2635428 - | hypothetical protein TERM 3624 2636341 - 2636356 + g 79 -4.6 -5.00616 | GCGCTGACCACGATG CGCTGG CGTA CTGGCG TTTTTTCAGCAGCAC TERM 3625 2636387 - 2636402 + g 81 -4.6 -5.03314 | opp_overlap 2636388, overlap 2636388 GCTCTTCCAGGCCAA AGCTGG CTTG CCAGCG TTTTTTACCGCTCAA TERM 3626 2636667 - 2636637 - G 72 -7.6 -3.92542 | overlap 2636640 2636662 2636663 2636665 GGTAGCGGCAAACAA CAATGGCTCCAGCA GTT TGCTTAAACCACTG CGCTGGATCAGCACC TERM 3627 2637213 - 2637192 - R 87 -8.7 -4.55023 | opp_overlap 2637192, overlap 2637187 CCTAATACGACAAAA GCCCAGACT TTGC AGCCTGGAC TTTTCAATTCAAACA TERM 3628 2637230 - 2637243 + r 74 -8.1 -4.13767 | opp_overlap 2637230 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA TERM 3629 2637243 - 2637230 - R 74 -8.1 -4.0098 | opp_overlap 2637230 TTTCAATTCAAACAA GGGAG ATAG CTCCC TTTTGGCATGAAGAA gyrA 2639892 - 2637265 - | DNA gyrase (type II topoisomerase), subunit A TERM 3630 2639020 - 2639040 + g 82 -2.4 -5.45802 | overlap 2639012 AGACTCGTCACGCAG CGCGCTGA TGCCT TCCACGCG TTTTTCTTTTACCAG ubiG 2640039 - 2640761 + | bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase TERM 3631 2640804 - 2640764 - T 100 -14.2 -5.14682 | gap 1, overlap 2640794 GCAGAATAAATAAAA TTGTTAGCCGGATAAGGTG CTCG CACCACATCCGGCTA-CAA TGCCGGGCGCAAAGC yfaL 2644535 - 2640822 - | adhesin TERM 3632 2640862 - 2640849 - G 73 -3.7 -4.87665 | overlap 2640850 2640851 CGTCATCGACAAAAA CCCTG CCGT CTGGG CAAAATCATCACTCC nrdA 2645231 - 2647516 + | ribonucleoside diphosphate reductase 1, alpha subunit TERM 3633 2647586 - 2647632 + F 74 -10.6 -2.57931 | opp_overlap 2647583 2647585 2647586 2647630, overlap 2647622 TAGGCCTGATAAGAC GCGCCAGCGTCGCATCAGGCTC CGG GTGCCGGATGCGGCGTAAACGC CTTATCCGGCCTACG TERM 3634 2647632 - 2647586 - f 74 -10.6 -2.5294 | opp_overlap 2647586 2647622, overlap 2647583 2647585 2647630 TAGGCCTGATAAGAC GCGCCAGCGTCGCATCAGGCTC CGG GTGCCGGATGCGGCGTAAACGC CTTATCCGGCCTACG TERM 3635 2647674 - 2647630 - f 93 -12.3 -3.53811 | opp_overlap 2647586 2647622 2647637, overlap 2647586 2647585 2647671 2647673 CGGATGCGGCGTAAA CGCCTTATCCGGCCTAC GGCTCGGATTT GTAGGCCTGATAAGACG CGCCAGCGTCGCATC TERM 3636 2647637 - 2647654 + F 72 -7.7 -3.88291 | gap 1, opp_overlap 2647630 GGCGTAAACGCCTTA TCCG-GCC TAC GGCTCGGA TTTGTAGGCCTGATA nrdB 2647750 - 2648880 + | ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like yfaE 2648880 - 2649134 + | putative 2Fe-2S cluster-containing protein; putative oxidoreductase subunit inaA 2649838 - 2649188 - | hypothetical protein ECUMN_2575 2651109 - 2649919 - | putative antibiotic efflux protein ( antibiotic resistance protein) TERM 3637 2650737 - 2650703 - G 90 -4.8 -5.4251 | GCCAGAGAGAAAAAA CTGATGCCCTCCCCAC GTC GGGAGGCCGGGATCAG CCGCGCGGAAATCGT ECUMN_2576 2651261 - 2652139 + | conserved hypothetical protein, putative transcriptional regulator TERM 3638 2652779 - 2652792 + G 74 -3.1 -5.00616 | opp_overlap 2652772 TCAGCAGACAGCATA GCTAA TTTA TTGGC TTTTTTCACGAAAGC ECUMN_2578 2652569 - 2653675 + | hypothetical protein TERM 3639 2653885 - 2653864 - T 82 -12.3 -2.78384 | TTTCTCTTTAGCAGA GGATGGCGC ATGA ACGCCATCC TGCAATAGCATTACT glpQ 2654972 - 2653896 - | periplasmic glycerophosphodiester phosphodiesterase glpT 2656335 - 2654977 - | sn-glycerol-3-phosphate transporter TERM 3640 2655182 - 2655198 + g 79 -3.5 -5.08824 | AGCCCGGTAAAGCCC GCTGCCG TAC CTGCCGC TTTTTTCGGTGCCAG TERM 3641 2656071 - 2656056 - G 70 -6 -4.25104 | CTGCGGGCAGGAAAA CGCGCG GATT CGAGCG ATCCGACACCGAGCC glpA 2656608 - 2658236 + | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , large subunit, FAD/NAD(P)-binding TERM 3642 2659248 - 2659238 - g 74 -8.2 -3.86897 | TTGATGTGCTACAAA CCGC CAC GCGG GGTGAATGGTATAAG glpB 2658226 - 2659485 + | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , membrane anchor subunit glpC 2659482 - 2660672 + | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit TERM 3643 2660685 - 2660712 + F 100 -13.6 -4.65895 | gap 1 TAAACTCCTTTCTGA TGCCCGGTAAGCA TGT TG-TTACCGGGCA TTTTTGCGTACACGA yfaD 2660865 - 2661824 + | Conserved hypothetical protein, putative transposase ypaA 2661837 - 2662034 + | Conserved hypothetical protein, putative transposase (fragment) yfaU 2662878 - 2662075 - | putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid-like aldolase yfaV 2664136 - 2662895 - | putative carboxylate transporter; phthalate permease family TERM 3644 2664026 - 2664010 - G 77 -3 -5.03227 | gap 1 ATACCACAAAGAAAA TGC-CTG CTCC CAGCGCA TAAGCTTCATTACTC TERM 3645 2664165 - 2664182 + r 70 -9.9 -2.94888 | overlap 2664163 2664178 TGGATCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT ydcM 2665374 - 2664166 - | putative transposase TERM 3646 2664741 - 2664754 + g 73 -3.8 -4.83615 | overlap 2664729 GTCGCTGAAGTCTCG CCAG CTTCTT CTGG TTTTTCTGAAAACTG TERM 3647 2665029 - 2665060 + g 72 -4.4 -4.65895 | gap 1 CGAGCTTAACGCCCT GCGGATAGCGGAATG CAT CATTCTG-TCCCCGC TTTTTGAATCGGGGA ECUMN_2589 2665498 - 2665352 - | hypothetical protein TERM 3648 2665420 - 2665410 - G 81 -4.6 -5.0917 | CTATGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT TERM 3649 2665816 - 2665803 - R 70 -6.7 -4.01135 | TTGAACAACAGCAAA CACCT GGTC AGGTG GAAAACCGCGCCTTA TERM 3650 2665867 - 2665822 - R 74 -8.1 -4.11216 | opp_overlap 2665835, overlap 2665823 TGGTCAGGTGGAAAA CCGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACAGCGCAC TGGATAAAGTCATGG TERM 3651 2665866 - 2665823 - R 79 -11.6 -3.06515 | opp_overlap 2665835, overlap 2665822 GGTCAGGTGGAAAAC CGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACAGCGCA CTGGATAAAGTCATG TERM 3652 2665835 - 2665854 + r 86 -10.6 -4.07885 | opp_overlap 2665823 2665822 AACCGCGCCTTATAT CCCCGCCC TGAA GGACGGGG TTTTACAGCGCACTG yfaY 2667065 - 2665857 - | hypothetical protein TERM 3653 2666569 - 2666551 - G 87 -4.5 -5.27335 | gap 1, overlap 2666552 TGCGGTAAAGAAAAA CGCTCGCG CAGG CGCG-GCA GGATTTCGTGCTCGA TERM 3654 2667157 - 2667135 - R 83 -11.2 -3.38832 | overlap 2667148 TAGTAAGAAACTGAA TGGCGCGACA GAA TGCCGCGCCG GAAGGGATCAGAAAC yfaZ 2667707 - 2667165 - | putative outer membrane porin protein yfaO 2667986 - 2668411 + | putative NUDIX hydrolase TERM 3655 2668439 - 2668418 - T 86 -13.1 -2.93073 | overlap 2668415 CTTCTGTAATAATGA TGACAGCCA TTAC TGGCTGTCA GATTGAAAATTTAGT ais 2669052 - 2668450 - | hypothetical protein TERM 3656 2668898 - 2668919 + g 85 -7.3 -4.79352 | gap 1, overlap 2668899 ACGACAACCGGATGC TGCTGTGCCA GTC TGGC-CAGCG TTTTATTGTCGATAC yfbE 2669342 - 2670499 + | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent yfbF 2670503 - 2671471 + | undecaprenyl phosphate-L-Ara4FN transferase TERM 3657 2671693 - 2671705 + G 91 -7.7 -5.0432 | overlap 2671690 2671691 CGTATTGCCCAACTC TCACC AGA GGTGA TTTTCTCTTTTTATT TERM 3658 2672931 - 2672911 - g 70 -4 -4.59773 | GCCTATGGCGAAAAA GAGGGT TTACAGTTC ACCCTC TTCCGCCCGTTTAAC yfbG 2671471 - 2673453 + | fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase yfbH 2673450 - 2674340 + | hypothetical protein TERM 3659 2674562 - 2674523 - g 75 -5.7 -4.59773 | opp_overlap 2674523 2674521 2674524 2674561, overlap 2674524 CGTTATTTCGAAAAA CCCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGGC TATTTGGCGCGAATA TERM 3660 2675372 - 2675350 - g 81 -4.8 -5.14563 | opp_overlap 2675353 GCTGGCAGCAAAAAA TAATCCTCTG GCG CTGCGGATTA ATGGCTGGATTAACA arnT 2674340 - 2675992 + | 4-amino-4-deoxy-L-arabinose transferase yfbW 2675989 - 2676324 + | conserved hypothetical protein; inner membrane protein TERM 3661 2676599 - 2676622 + GT 75 -5.2 -4.65895 | opp_overlap 2676603, overlap 2676601 ATGGATTGCATCAAT GATACTTCCC GGCT GGGAAGGAAC TTTTTCGCTGAAGGC yfbJ 2676042 - 2676710 + | hypothetical protein pmrD 2676970 - 2676704 - | polymyxin resistance protein B menE 2678435 - 2677080 - | o-succinylbenzoate-CoA ligase menC 2679394 - 2678432 - | o-succinylbenzoyl-CoA synthase TERM 3662 2678794 - 2678811 + g 81 -9.1 -4.09511 | opp_overlap 2678793 TTTCACGGGCAAACG CTCGCGA ATCA TCGCGGG TTTTGCACGGCTCTT TERM 3663 2679308 - 2679318 + g 85 -8.2 -4.57837 | opp_overlap 2679305 CAGGCAAACGTACAG CCCG TCG CGGG TTTTTAACCGCCTGT menB 2680251 - 2679394 - | dihydroxynaphthoic acid synthetase TERM 3664 2680296 - 2680273 - R 82 -10.4 -3.91897 | gap 1, opp_overlap 2680286 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATTACGCCAGCGGGA yfbB 2681024 - 2680266 - | putative thioesterase, menaquinone synthesis TERM 3665 2680301 - 2680326 + g 74 -9.7 -3.48276 | gap 1, overlap 2680286 CCAGACTTGCGATTA CGC-CAGCGGGA TTT TCCCGATGCGCG TTATGTCCGGCGCGA TERM 3666 2680433 - 2680422 - G 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 3667 2680740 - 2680718 - G 72 -7.6 -3.95051 | CAACAACTCCACAAA GCCCCGCCAG CTC CTGGCAAGCC GCCATCATCGCCACC TERM 3668 2680978 - 2681000 + g 72 -7 -4.18494 | opp_overlap 2680976 2680973, overlap 2680977 2680981 TGCAAAAACACCAGC CAGGGTAAAC CTG GTTTGCCGTG TTTTGCCTGCGCGTG menD 2682691 - 2681021 - | bifunctional 2-oxoglutarate decarboxylase and SHCHC synthase TERM 3669 2682051 - 2682061 + g 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CGC GCTG TTTTTCACTTTCCAG menF 2684075 - 2682780 - | isochorismate synthase 2 TERM 3670 2684140 - 2684110 - R 86 -13.4 -2.85847 | opp_overlap 2684098 AAGCCTCACATTATA CGGGGTACTACA AAAAAAA TGCAGTACCCCG GTGTAGGGAGGTTTT elaB 2684459 - 2684154 - | hypothetical protein elaA 2684975 - 2684514 - | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 3671 2684911 - 2684895 - G 70 -4.3 -4.44667 | opp_overlap 2684897, overlap 2684897 CTGCTCAACAACAAA CACCGCG CAA CGCAGTT GTAATAAGGCATAAA elaC 2685040 - 2685957 + | binuclear zinc phosphodiesterase TERM 3672 2685995 - 2685977 - f 89 -8.8 -4.77036 | opp_overlap 2685977 GCTTATTATTAAAAA CAGGGCGA AAC TTGCCCTG TTATCGCAACCCGCG TERM 3673 2685977 - 2685995 + F 80 -11 -3.28712 | opp_overlap 2685977 GCTTATTATTAAAAA CAGGGCGA AAC TTGCCCTG TTATCGCAACCCGCG TERM 3674 2687030 - 2687015 - g 71 -3.3 -4.83518 | AATAATAATATAAAA GTTCA TTTAAC TGAAC CCGAGATAATATTTT elaD 2686148 - 2687356 + | putative enzyme TERM 3675 2687369 - 2687411 + F 100 -13.7 -3.73224 | gap 1, opp_overlap 2687373, overlap 2687371 TAACATCATTGTTAA TTA-ATTCGACCAGTCAGCA AATA TGCTGACTGGTCGAACATAG TTTGCTAAAAAGTCA TERM 3676 2687371 - 2687408 + F 93 -15.7 -2.96695 | opp_overlap 2687373, overlap 2687369 ACATCATTGTTAATT AATTCGACCAGTCAGCA AATA TGCTGACTGGTCGAACA TAGTTTGCTAAAAAG TERM 3677 2687406 - 2687373 - f 100 -22.7 -3.35073 | opp_overlap 2687371 2687369 ATCATTGTTAATTAA TTCGACCAGTCAGCA AATA TGCTGACTGGTCGAA CATAGTTTGCTAAAA TERM 3678 2687899 - 2687876 - g 86 -4 -5.38249 | gap 1 AGCAATTAGAAAAAA CAGTTCGT-TA TCT TACACAAACTG TGCATCCACGTAGTG yfbL 2687746 - 2688717 + | putative membrane-associated peptidase yfbM 2688820 - 2689323 + | hypothetical protein TERM 3679 2689347 - 2689367 + T 72 -8.2 -3.97368 | opp_overlap 2689348, overlap 2689348 GGGCACCAAAAAAAA ACCGCCGA ACATG TCGGCGGC TTTCTGACTTACAAA TERM 3680 2689366 - 2689348 - T 100 -11.7 -6.15828 | opp_overlap 2689348 2689347 GGCACCAAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA TERM 3681 2689348 - 2689366 + T 80 -11.7 -2.981 | opp_overlap 2689348, overlap 2689347 GGCACCAAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA nuoN 2690668 - 2689391 - | NADH:ubiquinone oxidoreductase, membrane subunit N TERM 3682 2690030 - 2690018 - G 76 -9.1 -3.74792 | overlap 2690026 GATGATAGAGGCAAA GGCGA TAA TCGCC AGCACCACGCGAATC nuoM 2692384 - 2690855 - | NADH:ubiquinone oxidoreductase, membrane subunit M TERM 3683 2691818 - 2691808 - G 74 -2.4 -5.10461 | overlap 2691809 2691811 2691812 TGTAGTGAACAAAAA CCAG CGC CAGG ATGGCGATCAACATC TERM 3684 2692176 - 2692164 - G 75 -6.9 -4.41956 | ATAGAGATACCAAAA CGCGG GAT CCACG GCATGTCGAATTCAG TERM 3685 2692468 - 2692510 + r 72 -7.7 -3.88232 | gap 1, overlap 2692469 TCTCTTCGGATTGGG GGTAGTGTCGGATGCACCGC GAAT GCGGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 3686 2692469 - 2692509 + r 78 -11.2 -2.92618 | gap 1, overlap 2692468 CTCTTCGGATTGGGG GTAGTGTCGGATGCACCGC GAAT GCGGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2694389 - 2692548 - | NADH:ubiquinone oxidoreductase, membrane subunit L TERM 3687 2693044 - 2693062 + g 72 -4.6 -4.68601 | overlap 2693042 CTGTGAGTTATCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT nuoK 2694688 - 2694386 - | NADH:ubiquinone oxidoreductase, membrane subunit K nuoJ 2695239 - 2694685 - | NADH:ubiquinone oxidoreductase, membrane subunit J nuoI 2695793 - 2695251 - | NADH:ubiquinone oxidoreductase, chain I nuoH 2696785 - 2695808 - | NADH:ubiquinone oxidoreductase, membrane subunit H TERM 3688 2696178 - 2696154 - G 77 -12.1 -2.71712 | overlap 2696153 TCCGGCTGGTCAAAT GGGTGACGGTG ACA CACCGCCACGC CCGCGATGGCAAAGG TERM 3689 2696628 - 2696608 - G 90 -14.7 -2.71364 | TCATGTCCGCAACCA GCTGGAGCG AAC CGCCCCAGC CAACACGGTTAGGTC nuoG 2699514 - 2696782 - | NADH:ubiquinone oxidoreductase, chain G TERM 3690 2698745 - 2698756 + g 70 -5.8 -4.27316 | TAGTGGTTTACTGTA CCGT TGTA ACGG TTTTCGATTCGACGC TERM 3691 2699400 - 2699381 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2700898 - 2699561 - | NADH:ubiquinone oxidoreductase, chain F TERM 3692 2700020 - 2700034 + g 88 -11.4 -3.84451 | GTCAGTACCCGCGCC GCCTGG CTG CCAGGC TTTGAATTTCAGACC TERM 3693 2700821 - 2700835 + g 81 -10 -3.96148 | overlap 2700820 GCTGCGATATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2701395 - 2700895 - | NADH:ubiquinone oxidoreductase, chain E nuoC 2703200 - 2701398 - | NADH:ubiquinone oxidoreductase, chain C,D TERM 3694 2702920 - 2702909 - G 72 -5.8 -4.41548 | opp_overlap 2702918, overlap 2702917 2702918 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 3695 2702941 - 2702917 - G 74 -3.3 -4.89729 | opp_overlap 2702918, overlap 2702909 2702918 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT nuoB 2703956 - 2703294 - | NADH:ubiquinone oxidoreductase, chain B nuoA 2704415 - 2703972 - | NADH:ubiquinone oxidoreductase, membrane subunit A TERM 3696 2704117 - 2704103 - G 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC TERM 3697 2704968 - 2705003 + r 90 -8.9 -4.67556 | opp_overlap 2704952 2704971, overlap 2704969 2704971 GCTTTTTACTAAAAA AAAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTCG TTTTTACACTATTGT TERM 3698 2704969 - 2705002 + r 90 -12.4 -3.39449 | opp_overlap 2704952 2704971, overlap 2704968 2704971 CTTTTTACTAAAAAA AAGCCGCTGGGGTT TAAAAC ACCCCCAGCGGCTC GTTTTTACACTATTG TERM 3699 2704971 - 2705000 + r 95 -15 -3.25567 | opp_overlap 2704952 2704971, overlap 2704969 2704968 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTACACTAT TERM 3700 2705000 - 2704971 - R 100 -15 -5.86061 | opp_overlap 2704969 2704968 2704971, overlap 2704952 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTACACTAT lrhA 2705983 - 2705045 - | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes TERM 3701 2705265 - 2705293 + g 78 -8.7 -4.25104 | overlap 2705266 GGACTCATCATCTCG ACCGGCCTTGCCG TCA CGCCAAGACCGGC TTTTACTGCCGCACG TERM 3702 2705266 - 2705292 + g 81 -12.2 -3.14848 | overlap 2705265 GACTCATCATCTCGA CCGGCCTTGCCG TCA CGCCAAGACCGG CTTTTACTGCCGCAC TERM 3703 2705733 - 2705707 - G 72 -11.1 -3.12482 | opp_overlap 2705714, overlap 2705711 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGAATTTTTC TERM 3704 2706908 - 2706892 - H 74 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC TERM 3705 2707142 - 2707120 - g 70 -10.6 -2.75963 | overlap 2707119 ATTGCGATTCCAAAG GGCTTTACTC CGC GCGTAAAGCC ATCATGCAGCACTAC yfbQ 2706903 - 2708120 + | putative aminotransferase TERM 3706 2708130 - 2708156 + F 100 -13.8 -3.28791 | CTGTAATCTTAATTT CACTGCCGGA GATTGCA TCCGGCAGTG TTATCCCGCCACAAT TERM 3707 2708509 - 2708499 - g 77 -3.2 -5.09225 | opp_overlap 2708499, overlap 2708486 2708485 AGGCGATTGAAAAAA TCGC TCA GCAA AAACTGGTCGATATG TERM 3708 2708712 - 2708685 - g 70 -4.8 -4.56597 | gap 1, overlap 2708687 2708700 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG CCGCAGCCAGGAGAT yfbR 2708204 - 2708803 + | deoxyribonucleoside 5'-monophosphatase TERM 3709 2708811 - 2708858 + T 90 -12.8 -3.28712 | gap 1, opp_overlap 2708836 CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA yfbS 2710694 - 2708862 - | putative transporter TERM 3710 2710761 - 2710744 - R 100 -9.8 -5.24129 | TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG yfbT 2711431 - 2710781 - | putative phosphatase TERM 3711 2711333 - 2711310 - G 72 -4.5 -4.64676 | TTACCGTGAATAAAA GCCAGCACC TCTTCC GGCGCTAAC CCATGACGTCTGGCC yfbU 2711936 - 2711442 - | hypothetical protein TERM 3712 2711993 - 2711975 - R 100 -6 -5.76949 | opp_overlap 2711975 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 3713 2711975 - 2711993 + r 76 -6 -4.55689 | opp_overlap 2711975 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT yfbV 2712474 - 2712019 - | conserved hypothetical protein; putative inner membrane protein ackA 2712812 - 2714014 + | acetate kinase A and propionate kinase 2 TERM 3714 2714018 - 2714045 + F 100 -16.4 -4.36914 | gap 1, overlap 2714020 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 3715 2714020 - 2714042 + F 100 -19.2 -2.8733 | overlap 2714018 GACTGCCTGATTTCA CACCGCCAGC TCA GCTGGCGGTG CTGTTTTGTAACCCG TERM 3716 2715060 - 2715075 + G 78 -9 -3.96148 | CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2714089 - 2716233 + | phosphate acetyltransferase TERM 3717 2716274 - 2716296 + F 100 -15 -5.64304 | CTGCGGATATCGGAA CCGGAAATAG TGA CTATTTCCGG TTTTTTATTCTCTTA TERM 3718 2716602 - 2716589 - g 82 -3.1 -5.27938 | ATGGTCAAACAAAAA CACGA AAAG TCGTA GATCCACACTCATTT TERM 3719 2717246 - 2717265 + G 74 -8.6 -3.87149 | overlap 2717218 TTCGTGAAAAGCAGG CGGATGTT GAAC AACGTCCG TTTACCTTTGGTGAC yfcC 2716423 - 2717943 + | conserved hypothetical protein; putative inner membrane protein TERM 3720 2717953 - 2717970 + T 100 -12.7 -5.32944 | opp_overlap 2717948 2717955 CACTAAAAATGTTAA GAGCCGC AATT GCGGCTC TTTTTTCATTCTGCC TERM 3721 2717968 - 2717955 - T 72 -9.5 -3.17553 | opp_overlap 2717953, overlap 2717948 CTAAAAATGTTAAGA GCCGC AATT GCGGC TCTTTTTTCATTCTG yfcD 2718518 - 2717976 - | putative NUDIX hydrolase TERM 3722 2718064 - 2718082 + g 82 -9.6 -4.16016 | opp_overlap 2718063 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA yfcE 2719130 - 2718576 - | putative phosphatase yfcF 2719827 - 2719183 - | putative enzyme TERM 3723 2719419 - 2719434 + g 71 -2.4 -5.00616 | overlap 2719420 CACTGGCTTTTCCCT CCGCCG TTAA TGGCGC TTTTTTCGCACCCGC TERM 3724 2719519 - 2719534 + g 86 -9 -4.42386 | CCAGGCCTGAATCTG TCGTGC ACGC GCACGA TTTTCTAAATCAAGC TERM 3725 2719803 - 2719790 - G 79 -2.3 -5.27923 | TAAGGGGAGAAAAAA TGGGC ATCT GACCA AAACGTGATAGCGGG TERM 3726 2720230 - 2720210 - g 70 -5.4 -4.37092 | overlap 2720213 ATCTGGCTGAGAAAA CAGGACTC TTTTT GAGTCATG AAACGCGTGAGCGCG yfcG 2719963 - 2720610 + | putative S-transferase folX 2720667 - 2721029 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase TERM 3727 2721507 - 2721467 - g 93 -12.6 -3.93583 | gap 1, overlap 2721452 GAATTTACCCATAAA CTCTGCGCCC-GCTGGGAA GAAA TTGCCTGCCGGGCGCAAAG TGACAAAACGCGAGT yfcH 2721050 - 2721943 + | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain yfcI 2722881 - 2721991 - | putative transposase TERM 3728 2722857 - 2722845 - G 71 -9.1 -3.51168 | overlap 2722843 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 3729 2723070 - 2723047 - R 93 -12.4 -3.45027 | overlap 2723045 ATTCCCCATGAAATA CTCCGGCAGC GTTA GCCACCGGAG AGGAAATTATTTCAG hisP 2723850 - 2723077 - | histidine/lysine/arginine/ornithine transporter subunit ; ATP-binding component of ABC superfamily TERM 3730 2723883 - 2723896 + r 71 -4.5 -4.64766 | opp_overlap 2723874, overlap 2723884 GAAGAAGGTTTCACA TGCTG CAAC CAGCG TTTTTCCGCTCTGCG hisM 2724574 - 2723858 - | histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily hisQ 2725257 - 2724571 - | histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily hisJ 2726129 - 2725347 - | histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3731 2725989 - 2726001 + g 84 -4.1 -5.27477 | ATCGAAGCCAACCAG TTCGC CTT GTGAA TTTTTTGATTCAAAT argT 2727132 - 2726350 - | lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3732 2726476 - 2726499 + g 100 -5.2 -5.56264 | ATCTTTACGTAGCCC TACACCGGTG CCGT CACCGAAGTA TTTTTTGTCTTTCAC TERM 3733 2727389 - 2727371 - R 100 -13.2 -4.07687 | overlap 2727382 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAATGAGGTTATGCG ubiX 2727967 - 2727398 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3734 2728049 - 2728031 - R 81 -12.4 -2.53382 | AGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TGAGCGAAGGCATCA purF 2729579 - 2728062 - | amidophosphoribosyltransferase TERM 3735 2728481 - 2728494 + g 73 -3.7 -4.82901 | GGACGATGGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 3736 2729350 - 2729316 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TAGGGTAACGCACAT cvpA 2730104 - 2729616 - | membrane protein required for colicin V production TERM 3737 2730232 - 2730207 - R 93 -9.8 -5.14163 | ACGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC dedD 2731025 - 2730363 - | hypothetical protein folC 2732283 - 2731015 - | bifunctional folylpolyglutamate synthase and dihydrofolate synthase TERM 3738 2731682 - 2731695 + g 70 -3.7 -4.65895 | opp_overlap 2731667 GGCATTTCCGGCTCA CCGAC AATT GCCGG TTTTTCGCTGCGGAA TERM 3739 2732259 - 2732235 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 3740 2732342 - 2732320 - R 100 -17 -4.46656 | opp_overlap 2732320 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 3741 2732320 - 2732342 + r 100 -14.8 -3.45054 | opp_overlap 2732320 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2733267 - 2732353 - | acetyl-CoA carboxylase, beta (carboxyltranferase) subunit TERM 3742 2733411 - 2733399 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC GGAGTTACTTTTTAT dedA 2734082 - 2733423 - | conserved hypothetical protein; putative inner membrane protein TERM 3743 2734099 - 2734155 + r 81 -9.5 -4.1157 | overlap 2734110 TTAGCCTATGCCTTG TACTCGTCATCTTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAATGTTCCGAGCA TTATTCTTGTTAGTC TERM 3744 2734110 - 2734144 + r 93 -15.2 -3.03338 | overlap 2734099 CTTGTACTCGTCATC TTTCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCATTAT truA 2734977 - 2734165 - | pseudouridylate synthase I TERM 3745 2734726 - 2734757 + g 100 -13.6 -3.57144 | CGCATTTACGCCCAA CGTCCACGCAGCGT CTTT GCGCTGCGCGGTCG TTTCGAAATGCACAA usg 2735990 - 2734977 - | putative semialdehyde dehydrogenase TERM 3746 2735797 - 2735781 - G 88 -5.7 -5.24129 | overlap 2735748 GCCTGCGACAAAAAA CGCCAGC TGC GCCTGCG TCCAGTCGAATTCAG TERM 3747 2736043 - 2736016 - R 74 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATATTA CAGCAGAGAGC ATGAAGAAGAGATTA pdxB 2737192 - 2736056 - | erythronate-4-phosphate dehydrogenase flk 2737291 - 2738286 + | flagella control of anti-sigma factor FlgM secretion into the periplasm yfcJ 2739461 - 2738283 - | putative transporter; UPF0226 family TERM 3748 2739408 - 2739392 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGCGA TGCGG AAGAGTGAAAAATTG TERM 3749 2739622 - 2739653 + r 95 -14.6 -3.14132 | opp_overlap 2739629, overlap 2739629 2739650 CGATTGTCAATGATG TGAAAAAGGGAACC ATCG GGTTCCCTTTTGCA TTAGTGCCGGAGGCG TERM 3750 2739629 - 2739646 + r 93 -11.3 -4.30014 | opp_overlap 2739629, overlap 2739622 CAATGATGTGAAAAA GGGAACC ATCG GGTTCCC TTTTGCATTAGTGCC TERM 3751 2739646 - 2739629 - R 100 -11.3 -4.64598 | opp_overlap 2739629 2739622 CAATGATGTGAAAAA GGGAACC ATCG GGTTCCC TTTTGCATTAGTGCC fabB 2740966 - 2739746 - | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 3752 2741030 - 2741015 - H 71 -9 -3.281 | overlap 2741013 TTCGAATGCACAATA GCGTAC ACTT GTACGC CGAACAAGTCCGATC trmC 2741125 - 2743131 + | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase ; FAD-dependent demodification enzyme yfcL 2743530 - 2743252 - | hypothetical protein yfcM 2744112 - 2743564 - | hypothetical protein yfcA 2744921 - 2744112 - | conserved hypothetical protein; putative inner membrane protein TERM 3753 2744479 - 2744464 - G 75 -4.6 -4.84017 | AAGCCGTCATAAAAA CCGACG CAGC CACCGG CAATTAACGCGAAGG mepA 2745745 - 2744921 - | murein DD-endopeptidase TERM 3754 2745651 - 2745666 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 3755 2745691 - 2745735 + g 80 -5.5 -4.95211 | GCCACGGCGTCGCTG CCAGGCTGGCGCTACTGGC AAGCAGG GCCAGCAGCGCAATCGCGG TTTTGTTCATTTTTT aroC 2746834 - 2745749 - | chorismate synthase TERM 3756 2745846 - 2745820 - G 70 -5.9 -4.2828 | gap 1 GGTGATCCATTAAAA CGATCGCCAGCA TCGC TTCTG-CGATCG GCACCGCACGGATCC TERM 3757 2746391 - 2746405 + g 85 -2.8 -5.44119 | opp_overlap 2746391, overlap 2746393 AATCTCAATGCCAAA TTTCTC GGC GAGATA TTTTTTTGCAATCGC TERM 3758 2746393 - 2746403 + g 70 -5.4 -4.36089 | opp_overlap 2746391, overlap 2746391 TCTCAATGCCAAATT TCTC GGC GAGA TATTTTTTTGCAATC prmB 2747801 - 2746869 - | N5-glutamine methyltransferase yfcN 2747967 - 2748518 + | hypothetical protein ECUMN_2672 2749522 - 2748659 - | conserved hypothetical protein; putative exported protein TERM 3759 2749101 - 2749091 - G 71 -3.2 -4.75472 | overlap 2749094 TGTATATGAATAAAA GGAC GCG ATCC ACGGGCAACCATAAT ECUMN_2673 2750033 - 2749509 - | putative fimbrial protein (Adhesin) ECUMN_2674 2750500 - 2750030 - | putative fimbrial protein ECUMN_2675 2751111 - 2750497 - | putative minor fimbrial subunit TERM 3760 2750643 - 2750660 + gr 74 -2.7 -5.00616 | CAGACGTTAAGTCGA GTATTGA GTGA TCACTAC TTTTTTGAACCCGAA yfcS 2751769 - 2751020 - | putative periplasmic pilus exported chaperone TERM 3761 2751199 - 2751189 - GR 74 -8.2 -3.87075 | opp_overlap 2751185 ACTATTGGCGAGAAA CCGG CTG CCGG ATTGCCATTTTTCTG ECUMN_2677 2754440 - 2751789 - | conserved hypothetical protein; putative exported protein TERM 3762 2754503 - 2754480 - R 93 -11.8 -3.91897 | TTTGGTAGTTATAAA CCCCATAACT TTGC AGCTATGGGG GAAATACATTAGAGA ECUMN_2678 2755078 - 2754512 - | conserved hypothetical protein; putative exported protein TERM 3763 2755730 - 2755697 - R 89 -3 -5.61596 | opp_overlap 2755701, overlap 2755701 2755715 ATTGCCAGAAAAAAA TAAAGGCCCGATAG ATTACA CCAGCGGGCCTTGT GCATGCGTATTAAAT TERM 3764 2755726 - 2755701 - R 91 -8.2 -5.27709 | opp_overlap 2755701, overlap 2755697 2755715 CCAGAAAAAAATAAA GGCCCGATAG ATTACA CCAGCGGGCC TTGTGCATGCGTATT sixA 2756225 - 2755740 - | phosphohistidine phosphatase yfcX 2758572 - 2756428 - | fused enoyl-CoA hydratase and epimerase and isomerase ; 3-hydroxyacyl-CoA dehydrogenase TERM 3765 2756775 - 2756787 + g 88 -2.6 -5.46698 | TCAGCGGGTAAATGG CGGG ATCGA CCTG TTTTTTGCTTTTACG yfcY 2759882 - 2758572 - | beta-ketoacyl-CoA thiolase, anaerobic, subunit TERM 3766 2760045 - 2760019 - R 100 -14.4 -5.26907 | GAAGAGAAAATAAAA CGCCCCCGCCAA CAA CTGACAGGGGCG TACGTACCCGAGAGG yfcZ 2760347 - 2760063 - | hypothetical protein fadL 2760713 - 2762059 + | long-chain fatty acid outer membrane transporter TERM 3767 2762101 - 2762081 - f 100 -15.5 -3.85698 | opp_overlap 2762081 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCACACT TERM 3768 2762081 - 2762101 + F 100 -15.5 -3.64822 | opp_overlap 2762081 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCACACT yfdF 2762426 - 2763673 + | hypothetical protein TERM 3769 2763846 - 2763807 - T 76 -10.3 -3.3785 | opp_overlap 2763817, overlap 2763817 GTAATTGAGGGATAA CAACAAAAAAGGTGAGT TTTGTG ACTCACCTTTTTTATTT GTTTCTTATTCAGAA TERM 3770 2763817 - 2763836 + T 100 -8.6 -5.85425 | opp_overlap 2763807 2763817 GATAACAACAAAAAA GGTGAGTT TTGT GACTCACC TTTTTTATTTGTTTC TERM 3771 2763836 - 2763817 - T 100 -7.9 -5.68489 | opp_overlap 2763817, overlap 2763807 GATAACAACAAAAAA GGTGAGT TTTGTG ACTCACC TTTTTTATTTGTTTC vacJ 2764607 - 2763852 - | putative lipoprotein ECUMN_2687 2764803 - 2764633 - | hypothetical protein yfdC 2764901 - 2765833 + | conserved hypothetical protein; putative inner membrane protein TERM 3772 2765841 - 2765824 - f 74 -3.3 -5.1286 | GAAAAATGATAAAAA CCCGGCA TAAA TGGCGAG GGTTTAAGCAATCGA ECUMN_2689 2766193 - 2766345 + | hypothetical protein cscB 2767672 - 2766425 - | Sucrose transport protein (Sucrose permease) TERM 3773 2767722 - 2767732 + r 74 -8.2 -4.02542 | opp_overlap 2767721 2767719 2767722 ATTTAGAGATAAGAG CGGC CTC GCCG TTTACTTCTCACTTT cscK 2768657 - 2767734 - | Fructokinase cscA 2768864 - 2770306 + | Sucrose-6-phosphate hydrolase (beta-fructofuranosidase) (Sucrase) (Invertase) cscR 2771507 - 2770314 - | Sucrose operon repressor (Csc operon regulatory protein) TERM 3774 2770598 - 2770585 - G 77 -6.7 -4.47259 | opp_overlap 2770585 ATCAGAACATCAAAA TCTGG TTTG CCAGA TTTGAAGTGGTCATT TERM 3775 2772176 - 2772142 - g 70 -5.6 -4.36914 | opp_overlap 2772143 TCCGGCTCCATAAAA GCACGCGGCGGGATTT ATG AAGTCCTGGCACATGC AGAAAAACTGGCTCT dsdA 2771788 - 2773119 + | D-serine ammonia-lyase emrY 2774763 - 2773225 - | putative multidrug efflux system emrK 2775926 - 2774763 - | EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component TERM 3776 2775548 - 2775575 + g 83 -10 -4.1337 | gap 1, opp_overlap 2775548, overlap 2775551 ATTGTTGATACTGAA TAC-GTGCTGAAG CGA CTTCGGCACTGTA TTGTTTATCCTGTAA TERM 3777 2775551 - 2775571 + g 80 -11.9 -3.39301 | opp_overlap 2775548, overlap 2775548 GTTGATACTGAATAC GTGCTGAAG CGA CTTCGGCAC TGTATTGTTTATCCT evgA 2776342 - 2776956 + | DNA-binding response regulator in two-component regulatory system with EvgS TERM 3778 2777260 - 2777235 - g 75 -5.5 -4.60924 | TAAATCTGTTAAAAA GAGCGTTAAAT ATCA AATTAACACTC CGGGAATACGCCGAT TERM 3779 2778198 - 2778179 - g 100 -4.3 -5.66989 | opp_overlap 2778179 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC CTATTATTATGAGCT TERM 3780 2779092 - 2779073 - g 70 -3.6 -4.65722 | gap 1, overlap 2779081 GTAGAGAGAAATAAA GCGATCAAT GCA ACTG-TCGC AAAAAGTCAGTTTCT evgS 2776961 - 2780554 + | hybrid sensory histidine kinase in two-component regulatory system with EvgA TERM 3781 2780561 - 2780587 + T 80 -10.9 -3.34517 | opp_overlap 2780558 2780559, overlap 2780559 AATGACTAAATAGCG GCTCCCACAAT GTTCA AATGTGGGAGC TATTTACCAGCACAT yfdE 2781754 - 2780609 - | putative acyl-CoA-transferase, NAD(P)-binding TERM 3782 2780682 - 2780697 + g 75 -4.6 -4.87786 | opp_overlap 2780676, overlap 2780653 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 3783 2781484 - 2781501 + g 77 -7.1 -4.49311 | overlap 2781474 CATCCGCTTGTTTAA GCATATT TATA AATATGC TTTTATCGTGATCAT TERM 3784 2781799 - 2781775 - R 81 -6.5 -5.0133 | gap 1, opp_overlap 2781775 2781774 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA yfdV 2782772 - 2781828 - | putative transporter oxc 2784535 - 2782841 - | putative oxalyl-CoA decarboxylase TERM 3785 2783432 - 2783449 + g 73 -3.5 -4.79667 | AAAGTAATTTAATGG TTGAGTA TCTG TACTTAA TTTTTCATGCATTTT TERM 3786 2784357 - 2784342 - G 77 -6.1 -4.63218 | overlap 2784343 2784344 TTTTGGGTAAGAAAA CCGCT TGCCGC AGCGG CATAGCCTGCCGACT frc 2785839 - 2784589 - | formyl-CoA transferase, NAD(P)-binding TERM 3787 2785726 - 2785688 - G 70 -10.2 -3.18849 | opp_overlap 2785686 2785682, overlap 2785686 TCGATATCAGGAATA TCTCGCAGCTGGTGACGC GTT ACGTCACCAACGCCGGGA CGTTCAATTTTAATG TERM 3788 2786259 - 2786297 + r 74 -10.6 -2.59564 | opp_overlap 2786260, overlap 2786258 CGCGAGCGCCAAATA ATTTTATGACCACAAT CTGTCGT ATTGTGGTCATAAAAA ATTGTCGGCTGGAGG TERM 3789 2786296 - 2786260 - R 100 -14.1 -3.92542 | opp_overlap 2786259 2786258 GCGAGCGCCAAATAA TTTTATGACCACAAT CTGTCGT ATTGTGGTCATAAAA AATTGTCGGCTGGAG yfdX 2786983 - 2786351 - | hypothetical protein TERM 3790 2787333 - 2787347 + G 75 -4.3 -4.85822 | GTCTCTATTATGGCA TGCAA TGTTT TTGCA TTTTCTATTTCTGGT TERM 3791 2787413 - 2787400 - g 90 -6.7 -5.15381 | overlap 2787389 AAGAGACGGAAAAAA CGTCA GCGA TGACG ACCACACACTCTACA ypdI 2787279 - 2787554 + | putative lipoprotein yfdY 2787873 - 2787631 - | conserved hypothetical protein; putative inner membrane protein ECUMN_2707 2788181 - 2788107 - | hypothetical protein ddg 2788226 - 2789146 + | palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase TERM 3792 2789207 - 2789180 - T 78 -11.4 -2.90496 | opp_overlap 2789180, overlap 2789177 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3793 2789180 - 2789207 + T 100 -11.4 -5.4756 | opp_overlap 2789180 2789177 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3794 2789615 - 2789596 - T 100 -13.6 -4.8622 | opp_overlap 2789596 CTGTGCAATGAAAAA CAGGAGCC ATCT GGCTCCTG TTTGCATTTCTGGCG TERM 3795 2789596 - 2789615 + T 100 -13.6 -3.89215 | opp_overlap 2789596 CTGTGCAATGAAAAA CAGGAGCC ATCT GGCTCCTG TTTGCATTTCTGGCG yfdZ 2790876 - 2789638 - | putative aminotransferase, PLP-dependent TERM 3796 2790084 - 2790095 + g 77 -5.8 -4.63218 | TAATACGTGCCAGCG CGCT GACC AGCG TTTTGTTGCCAACCA TERM 3797 2790921 - 2790938 + H 70 -6.9 -4.11394 | overlap 2790923 2790934 ACCGTCCGAGCGACG CTGCCAC GATG GTGGCTG TTTTGAAAATAGCCT TERM 3798 2791860 - 2791847 - g 70 -3.7 -4.59773 | overlap 2791849 2791850 GTTGAGGGCGAAAAA GAGGC CAGC GCCGC GCGGCAGGCCAAGCT TERM 3799 2791870 - 2791849 - g 72 -7.9 -3.91506 | gap 1, overlap 2791847 2791850 TGAGGGCGAAAAAGA GGCCAG-CGC CGC GCGGCAGGCC AAGCTGGCGCTGGAT TERM 3800 2792121 - 2792100 - g 81 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC ypdA 2791253 - 2792950 + | putative sensory kinase in two-component system with YpdB ypdB 2792965 - 2793699 + | putative response regulator in two-component system with YpdA TERM 3801 2793818 - 2793839 + G 70 -5.9 -4.25437 | gap 1, overlap 2793794 GGTTTGCCAGCCAGC CTGCCTCATT GCC AGTG-GGCAG TTTATGTATTGATTT TERM 3802 2794234 - 2794250 + G 84 -7.9 -4.60797 | ATGCCACCGGGCAAT TCGCAGC CGC GCAGCGA TTTTCTCTATCACAG ypdC 2793712 - 2794569 + | putative DNA-binding protein ypdD 2797067 - 2794572 - | putative fused PTS enzymes (multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component ypdE 2798129 - 2797092 - | broad substrate metalloaminopeptidase TERM 3803 2797205 - 2797175 - G 70 -7 -4.11216 | gap 2 GCTGCATCTGCAAAA TGTCGCGGCAATCG GCAAT CGAT-GCCGC-ACA ATGTCCGTGGCGCGT ypdF 2799214 - 2798129 - | Xaa-Pro and Met-Xaa peptidase TERM 3804 2798575 - 2798534 - G 74 -11.1 -3.21099 | gap 2, opp_overlap 2798521 GCCGTTCACCAGCAA GGTGCGCGTCATATCAGAG CAGTAC CCCTGATA-GA-GCGCACC AAAATCAAGAGTGAC ypdG 2800476 - 2799229 - | putative enzyme IIC component of PTS TERM 3805 2799904 - 2799930 + g 76 -12.4 -2.54732 | opp_overlap 2799906 2799911, overlap 2799903 2799906 2799911 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCATTTCAC TERM 3806 2799911 - 2799923 + g 72 -5.5 -4.56607 | opp_overlap 2799911 2799906, overlap 2799906 2799904 2799903 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC ypdH 2800824 - 2800498 - | putative enzyme IIB component of PTS TERM 3807 2801031 - 2801006 - R 72 -8.3 -3.70674 | overlap 2801004 2801007 2801009 GTATGATTTAAAAGA TTATCGGGAGA GTTA CCTCCCGATAT AACAGGAAGGATTTA TERM 3808 2801030 - 2801007 - R 79 -11.8 -2.81922 | overlap 2801006 2801004 2801009 TATGATTTAAAAGAT TATCGGGAGA GTTA CCTCCCGATA TAACAGGAAGGATTT TERM 3809 2801028 - 2801009 - R 72 -10 -2.95081 | overlap 2801007 2801006 2801004 TGATTTAAAAGATTA TCGGGAGA GTTA CCTCCCGA TATAACAGGAAGGAT glk 2802009 - 2801044 - | glucokinase yfeO 2802213 - 2803469 + | putative ion channel protein ypeC 2803584 - 2803910 + | hypothetical protein TERM 3810 2803967 - 2803934 - T 75 -9.5 -3.44319 | opp_overlap 2803944, overlap 2803935 GTCAATGGAGCACAA TGCCTGATGCGACGC TAGC GCGTCTTATCAGGCC TACAAACCGTCTCTT TERM 3811 2803966 - 2803935 - T 84 -13 -2.6627 | opp_overlap 2803944, overlap 2803934 TCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCGTCTCT mntH 2805290 - 2804052 - | manganese/divalent cation transporter TERM 3812 2805321 - 2805306 - H 72 -7.6 -4.07568 | opp_overlap 2805306 2805301 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTATGCCA TERM 3813 2806219 - 2806240 + G 70 -7.3 -4.00782 | CGTCGTTGCGGCGCT GGTACTGAA CATG TTCAGCACC TTTATCGTGCTGTCG nupC 2805626 - 2806828 + | nucleoside (except guanosine) transporter TERM 3814 2806878 - 2806831 - T 100 -17.2 -3.01791 | opp_overlap 2806832 2806845, overlap 2806834 2806845 ACTGGTGCTGTAAGA CCATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC TERM 3815 2806832 - 2806877 + T 100 -16.3 -3.17212 | opp_overlap 2806831 2806834 2806845, overlap 2806845 CTGGTGCTGTAAGAC CATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3816 2806875 - 2806834 - T 100 -17.5 -2.73875 | opp_overlap 2806832 2806845, overlap 2806831 2806845 GGTGCTGTAAGACCA TACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCC TGTTAATCAGCTAAT TERM 3817 2806864 - 2806845 - T 100 -15 -5.43414 | opp_overlap 2806845 2806832, overlap 2806834 2806831 ACCATACATAAAAAA GCCGGGGA TAAT TCCCCGGC TTTTTTACGCCTGTT TERM 3818 2806845 - 2806864 + T 100 -15 -5.04987 | opp_overlap 2806834 2806831 2806845, overlap 2806832 ACCATACATAAAAAA GCCGGGGA TAAT TCCCCGGC TTTTTTACGCCTGTT yfeA 2809067 - 2806878 - | putative diguanylate cyclase TERM 3819 2808303 - 2808285 - G 72 -4.4 -4.70659 | GGTGAGATTTAAAAA CGGATAGC GAA GCTTACCG ACACCGAGGGTAAAG TERM 3820 2808348 - 2808332 - G 77 -2.9 -5.03227 | AGATGATAAAGAAAA CAGGTAC CAG GTAACCG GCAATAAAGTCATTC TERM 3821 2809265 - 2809246 - H 100 -11.4 -5.43414 | AGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTGGAAATTTGGTGG TERM 3822 2809806 - 2809794 - g 82 -9.1 -4.28762 | overlap 2809784 ACAACGTCACCAAAA CCTGG CGT CCAGG GTGGCAAAGCCCGAC yfeC 2809701 - 2810045 + | putative nucleic acid-binding transcriptional regulator yfeD 2810047 - 2810439 + | putative nucleic acid-binding transcriptional regulator TERM 3823 2810448 - 2810470 + T 100 -12.7 -4.51238 | opp_overlap 2810448 AGAATAAATAAAAAA CGGCAGGGG TATCT CTCCTGCCG TTTATCTTTTATGCG TERM 3824 2810470 - 2810448 - T 100 -10.5 -5.82036 | opp_overlap 2810448 AGAATAAATAAAAAA CGGCAGGGG TATCT CTCCTGCCG TTTATCTTTTATGCG gltX 2811905 - 2810490 - | glutamyl-tRNA synthetase TERM 3825 2812595 - 2812563 - H 72 -9.9 -3.19463 | opp_overlap 2812564 2812572, overlap 2812564 2812572 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATATGCGGTTTGTAA TERM 3826 2812594 - 2812564 - H 84 -13.4 -2.51464 | opp_overlap 2812564 2812572, overlap 2812563 2812572 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATATGCGGTTTGTA TERM 3827 2812564 - 2812594 + H 89 -14.9 -2.94194 | opp_overlap 2812563 2812564 2812572, overlap 2812572 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATATGCGGTTTGTA TERM 3828 2812586 - 2812572 - H 93 -9.2 -5.17576 | opp_overlap 2812572 2812564, overlap 2812564 2812563 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATATGC TERM 3829 2812572 - 2812586 + H 95 -8.5 -5.24989 | opp_overlap 2812564 2812563 2812572, overlap 2812564 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATATGC ECUMN_2729 2812681 - 2813022 + | conserved hypothetical protein, putative flxA protein yfeR 2813939 - 2813013 - | putative DNA-binding transcriptional regulator yfeH 2814029 - 2815027 + | putative sodium/bile acid symporter family (mazG-like) ECUMN_2732 2815335 - 2815024 - | hypothetical protein ligA 2817259 - 2815244 - | DNA ligase, NAD(+)-dependent TERM 3830 2816513 - 2816485 - GR 70 -7.3 -3.91897 | CCGCCGATTCACAAA GCGTTACCCGGTC GCT GACCGGCAAACCC CACTGTTTAAATTGC TERM 3831 2817298 - 2817282 - R 95 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAGGAGTTA zipA 2818316 - 2817330 - | cell division protein involved in Z ring assembly TERM 3832 2818429 - 2818463 + H 70 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3833 2818582 - 2818592 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3834 2818861 - 2818871 + G 72 -6.8 -4.20516 | AACTGGATTGCCGCT CCGT TTA ACGG TTTATTGGCTGAACA cysZ 2818558 - 2819319 + | putative inner membrane protein TERM 3835 2819359 - 2819378 + F 100 -12.8 -3.7347 | opp_overlap 2819359 2819357, overlap 2819343 CGCTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3836 2819378 - 2819359 - f 80 -10.6 -3.34398 | opp_overlap 2819343 2819359, overlap 2819357 CGCTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3837 2819984 - 2819970 - g 82 -3.4 -5.19261 | overlap 2819971 AAATTCACGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2819504 - 2820475 + | cysteine synthase A, O-acetylserine sulfhydrolase A subunit TERM 3838 2820504 - 2820519 + F 100 -9 -5.26316 | opp_overlap 2820504 2820495 AAAATGCGTAAAAAA GCACCT TTTC AGGTGC TTTTTTGTGGCCTGC TERM 3839 2820519 - 2820504 - f 93 -9 -5.08011 | opp_overlap 2820504, overlap 2820495 AAAATGCGTAAAAAA GCACCT TTTC AGGTGC TTTTTTGTGGCCTGC ptsH 2820859 - 2821116 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3840 2821484 - 2821443 - g 72 -8.9 -3.73402 | gap 1, opp_overlap 2821449 2821449, overlap 2821448 2821451 ATAGCCCTGATTAAA GATAAGCACATGA-CAGCTG ACG CAGCTGCTCATGAAGTTATC GAAGGTCAGGCTTCT TERM 3841 2821476 - 2821451 - g 75 -11.3 -3.00128 | gap 1, opp_overlap 2821449 2821449, overlap 2821448 2821443 GATTAAAGATAAGCA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2821161 - 2822888 + | PEP-protein phosphotransferase of PTS system (enzyme I) TERM 3842 2823130 - 2823107 - g 74 -3 -4.90525 | CAACTGGAAACAAAA TGGTCGCGCC TGTA GACGGCACCA TTGGTAAAATCTTTG crr 2822929 - 2823438 + | glucose-specific enzyme IIA component of PTS TERM 3843 2823451 - 2823482 + T 100 -16.8 -2.70932 | opp_overlap 2823458, overlap 2823458 2823480 TAATTCTTGCCGCAG TGAAAAATGGCGCC CATC GGCGCCATTTTTTA TGCTTCCGCCAGCGG TERM 3844 2823458 - 2823475 + T 100 -12.7 -5.37345 | opp_overlap 2823458, overlap 2823451 TGCCGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTATGCTTCCG TERM 3845 2823475 - 2823458 - T 100 -12.7 -4.65895 | opp_overlap 2823451 2823458 TGCCGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTATGCTTCCG pdxK 2824331 - 2823480 - | pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase TERM 3846 2823771 - 2823784 + g 77 -6.7 -4.56597 | CACCCATTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA yfeK 2824436 - 2824804 + | hypothetical protein cysM 2825718 - 2824807 - | cysteine synthase B (O-acetylserine sulfhydrolase B) TERM 3847 2825830 - 2825803 - R 90 -9.1 -4.72272 | gap 1, opp_overlap 2825803 2825820 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysA 2826949 - 2825852 - | sulfate/thiosulfate transporter subunit ; ATP-binding component of ABC superfamily TERM 3848 2826509 - 2826523 + g 88 -11.4 -3.85698 | AGCGAGCGCACGCGC CAGCGC CAC GCGCTG TTTCTGCCCGCCGGA cysW 2827814 - 2826939 - | sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily TERM 3849 2827262 - 2827205 - G 74 -8.3 -3.90318 | gap 1 GCACCACGCCATAAA GCAGC-GCCCAGCGGATGTTCGGCAGCG TGA CGCGACGGAACATCTGCCAGCCAGATGC GCCCAGCAAAATCGC cysU 2828647 - 2827814 - | sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily TERM 3850 2828460 - 2828447 - G 72 -8.1 -3.9009 | opp_overlap 2828447 2828450 AATTGATGCCACAAA CGCTG ACAG CAGCG TCACTTTGTAGGCCG cysP 2829663 - 2828647 - | thiosulfate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3851 2829821 - 2829798 - R 86 -11 -3.92324 | GGGTTCAAGACGAAA TCCTCCCCAC AAAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2830625 - 2829834 - | putative oxidoredutase, sulfate metabolism protein yfeT 2831611 - 2830754 - | putative DNA-binding transcriptional regulator TERM 3852 2831240 - 2831265 + g 79 -9.7 -3.72576 | gap 1, opp_overlap 2831258 2831259, overlap 2831240 AATGATTTTTTGCAG CC-GCGCGTAGT CGA ACAACGCGCAGG TTTGCTCCAGCGCCA TERM 3853 2832522 - 2832506 - g 84 -8 -4.62302 | CAATATCGTCAAAAA CGCTAC CGGAT GTAGCG CAGAGCAAGCGGAAG TERM 3854 2832639 - 2832621 - g 93 -5.9 -5.1925 | opp_overlap 2832620 GCAGAAGCTAAAAAA CGCCTTG ATCAA CACGGCG GCTTTATTCGTCAGG yfeU 2831775 - 2832671 + | putative PTS component; possibly regulatory TERM 3855 2832854 - 2832870 + GF 82 -7.9 -4.57073 | CGTCATTTTGACCAG CGACCAG GTG CAGGTCG TTTTTGGGCCAGGTA murP 2832675 - 2834099 + | putative fused PTS enzymes: IIB component ; IIC component TERM 3856 2834247 - 2834287 + GT 74 -9.6 -3.30441 | opp_overlap 2834254, overlap 2834248 2834250 2834283 2834284 GGATCGCTGGATTAG CCAGCAAGTGGACGCCGG TTATC CCGGCGTAAACCTGCTGA TTATAAAAGATAATC TERM 3857 2834248 - 2834286 + GT 84 -13.1 -2.5805 | opp_overlap 2834254, overlap 2834247 2834250 2834283 2834284 GATCGCTGGATTAGC CAGCAAGTGGACGCCGG TTATC CCGGCGTAAACCTGCTG ATTATAAAAGATAAT murQ 2834017 - 2835405 + | D-lactyl ether N-acetylmuramic-6-phosphate acid etherase; beta-lactamase family TERM 3858 2835439 - 2835412 - T 100 -11.3 -5.16071 | opp_overlap 2835412 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGAT ACTGGCTGGCC TTTAATCATCGAATC TERM 3859 2835412 - 2835439 + T 100 -13.5 -3.79251 | opp_overlap 2835412 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGAT ACTGGCTGGCC TTTAATCATCGAATC yfeX 2836362 - 2835463 - | hypothetical protein TERM 3860 2835897 - 2835922 + g 74 -6 -4.54047 | opp_overlap 2835889 2835888, overlap 2835888 2835899 TGATAACCGCCACTT CGCGGCGCGT CTCTTC ACCCGCCGGG TTTTCTGTACCGTCA TERM 3861 2836402 - 2836384 - R 85 -10.3 -4.20868 | opp_overlap 2836384 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGGGCGCTATT TERM 3862 2836384 - 2836402 + r 78 -10.3 -3.63341 | opp_overlap 2836384 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGGGCGCTATT yfeY 2837033 - 2836458 - | hypothetical protein TERM 3863 2836805 - 2836785 - G 77 -3.1 -5.06451 | CATCACTTCAAAAAA GCGCACCAC GTT GCCGTTCGC GGTTTTCATTCCGCT yfeZ 2837543 - 2837094 - | conserved hypothetical protein; putative inner membrane protein TERM 3864 2837338 - 2837322 - G 75 -4.3 -4.75372 | overlap 2837324 ACCACTCAGCAAAAA TGCCAGC ACC GCCGGAA TACCGGGAATCAACC ypeA 2837955 - 2837530 - | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 3865 2838970 - 2838959 - g 72 -5.8 -4.36914 | overlap 2838960 CGTTTCGCCAGAAAA TCGC CACA GCGA TTGCCGAAGGCGTGA amiA 2838169 - 2839038 + | N-acetylmuramoyl-l-alanine amidase I TERM 3866 2839266 - 2839312 + G 85 -11.7 -3.69323 | gap 2, overlap 2839267 GCCTGCTTCCGCCAC CGCTCATCGCC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCA TTTCACTGGTAGTGC TERM 3867 2839267 - 2839311 + G 95 -15.2 -2.81272 | gap 2, overlap 2839266 CCTGCTTCCGCCACC GCTCATCGCC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGC ATTTCACTGGTAGTG TERM 3868 2839400 - 2839390 - g 70 -4.6 -4.58395 | opp_overlap 2839391, overlap 2839391 TTTATTGCCGAAAAA CCGG GTG CCGA ACCCGTCTGGTGGTT TERM 3869 2839573 - 2839599 + G 84 -10.8 -3.81951 | opp_overlap 2839564 2839566 2839576, overlap 2839576 CTCAAACATCGCAAC GAACAGCGCGGC ATT GGCGGGCTGTTC TTTGATGATCTGAAC TERM 3870 2839576 - 2839596 + G 70 -6.7 -4.03811 | opp_overlap 2839564 2839566 2839576, overlap 2839573 AAACATCGCAACGAA CAGCGCGGC ATT GGCGGGCTG TTCTTTGATGATCTG hemF 2839042 - 2839941 + | coproporphyrinogen III oxidase yfeG 2840999 - 2839947 - | putative DNA-binding transcriptional regulator TERM 3871 2840428 - 2840462 + g 70 -7.1 -4.11081 | gap 2, opp_overlap 2840448, overlap 2840459 TTCTCGCAAAACGTC GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC TTTATGCTGTTCTTT yffI 2841545 - 2841045 - | putative ethanolaminosome structural protein with putative role in ethanolamine utilization TERM 3872 2841093 - 2841125 + g 70 -4.8 -4.56597 | overlap 2841095 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCGAGCGGCCA eutL 2842217 - 2841558 - | putative carboxysome-related structural protein with putative role in ethanolamine utilization eutC 2843114 - 2842227 - | ethanolamine ammonia-lyase, small subunit (light chain) TERM 3873 2843150 - 2843180 + r 75 -8.9 -3.62096 | gap 1, opp_overlap 2843147 TCAGAAGAACAGTGA CGGATCGCCCGCCC GTTT GGTCAGGCGA-CCG TTTGCCATAATGCCC eutB 2844496 - 2843135 - | ethanolamine ammonia-lyase, large subunit, heavy chain eutA 2845911 - 2844508 - | reactivating factor for ethanolamine ammonia lyase TERM 3874 2845583 - 2845565 - G 85 -8.8 -4.46212 | CTGGCGACGACAAAA TCGCCCAG CGA CTGGGAGA GCGTCATCACCGCCG eutH 2847134 - 2845908 - | putative ethanolamine transporter TERM 3875 2847117 - 2847099 - G 74 -7.5 -4.12254 | opp_overlap 2847099 2847098 2847101 TATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC TERM 3876 2847228 - 2847183 - R 100 -17 -3.53811 | opp_overlap 2847175, overlap 2847225 CGGATGCGGCGTAAA CGCCTTATCCGCCCTACATG TGCAAT CCTGTAGGCCGGATAAGACG CAGCAAGCGTCGCAT TERM 3877 2847278 - 2847236 - R 77 -11.2 -2.53255 | opp_overlap 2847275, overlap 2847225 2847235 ATAAGACGCAGCAAG CGTCGCATCCAGCAATTGCA CCG CGCCACTGGCGGATGCGGCG TAAACGCCTTATCCG TERM 3878 2847329 - 2847283 - R 81 -11 -3.53811 | gap 1, opp_overlap 2847275, overlap 2847284 2847327 CGGATGCGGCGTAAA CGC-CTTATCCGCCCTACATG TGCAAT CCTGTAGGCCGGATAAGAGCA GCAAGCGTTGCATCC TERM 3879 2847328 - 2847284 - R 82 -12.3 -2.72144 | gap 1, opp_overlap 2847275, overlap 2847283 2847327 GGATGCGGCGTAAAC GC-CTTATCCGCCCTACATG TGCAAT CCTGTAGGCCGGATAAGAGC AGCAAGCGTTGCATC TERM 3880 2847614 - 2847648 + r 86 -9.9 -4.31433 | opp_overlap 2847624, overlap 2847615 ATGTGCAATCCTGTA GGCCGGATAAGACGC AGCAA GCGTCGCATCCGGCA TTTATTGTGCCGCTG TERM 3881 2847615 - 2847647 + r 91 -13.4 -3.18378 | opp_overlap 2847624, overlap 2847614 TGTGCAATCCTGTAG GCCGGATAAGACGC AGCAA GCGTCGCATCCGGC ATTTATTGTGCCGCT eutG 2848837 - 2847650 - | putative alcohol dehydrogenase in ethanolamine utilization; ethanolaminosome eutJ 2849663 - 2848827 - | putative chaperonin, ethanolamine utilization protein TERM 3882 2849017 - 2849038 + g 81 -4.3 -5.14563 | opp_overlap 2849001 2849017, overlap 2849022 CCCTGCCCTTCAATA TGCCGGGCG ACAA TGTCCGCCA TTTTTTCGTACACCG TERM 3883 2849396 - 2849370 - G 79 -10.1 -3.7331 | opp_overlap 2849388, overlap 2849368 ACCTGGAGGAAAAGA GGTCGCCGCAT GGCTA AAACGGCGACC GAATTGCTGCTCGAG TERM 3884 2849695 - 2849679 - R 71 -8.7 -3.55444 | overlap 2849682 CTGTTACTCCTTAAA CAATGCG AAA CGCATCG ACTAATACACAGCGA eutE 2851077 - 2849674 - | putative aldehyde dehydrogenase, ethanolamine utilization protein TERM 3885 2849738 - 2849703 - G 70 -9.8 -3.15699 | gap 2, opp_overlap 2849707, overlap 2849701 2849705 ACGCATCGACTAATA CACAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG-G TTACCCCTTCACCGG TERM 3886 2849737 - 2849705 - G 85 -13.5 -3.13867 | gap 1, opp_overlap 2849707, overlap 2849703 2849701 GCATCGACTAATACA CAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG GTTACCCCTTCACCG TERM 3887 2850355 - 2850387 + g 72 -6.2 -4.33803 | gap 1 TTCATCCACCACTAC CGGCGGGTTGCCAGC ACCT GC-GGCAATCAGACG TTTATTGGTGTGTTT TERM 3888 2850563 - 2850579 + g 71 -2.1 -5.00616 | overlap 2850564 TGGTTGAGCAGCGTA ATCGCCC GCT GGGAGAC TTTTTTCGCCGCCGG TERM 3889 2850782 - 2850796 + g 70 -3.5 -4.60924 | gap 1, opp_overlap 2850768, overlap 2850778 ACGCCTGGTGTGCCG CG-CGC CTGA GCGACG TTTTTGGCAAATTTA cchB 2851376 - 2851089 - | putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein TERM 3890 2851475 - 2851450 - R 70 -9 -3.1458 | overlap 2851448 CTGAAAAAGGAGAGA GCGTGACGCC CGAATC GACGTCACAC AGGGTGATTACAGGT cchA 2851776 - 2851483 - | putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein TERM 3891 2851584 - 2851617 + g 71 -9.5 -3.55444 | gap 1 CCAGCTCGCCGATAC GCTGTG-CCGCTGCAG CAC CTGCGTCGGTCGCGGC TTTACAGGCTGCAAC eutI 2852831 - 2851815 - | putative phosphotransacetylase subunit TERM 3892 2852791 - 2852780 - G 70 -3.6 -4.60041 | ACGCATCCGGAAAAA CCAC TCTG GCGG GCGCTCGCAACGCCA eutT 2853631 - 2852828 - | putative cobalamin adenosyltransferase in ethanolamine utilization TERM 3893 2853481 - 2853470 - G 70 -5.8 -4.16842 | opp_overlap 2853473 TTCATCGTCAACAAA CAGG CGGC CCTG CTCGTCAATAAACTT eutQ 2854329 - 2853628 - | conserved hypothetical protein involved in degradation of ethanolamine eutP 2854783 - 2854304 - | putative nucleoside triphosphate hydrolase domain protein ypfE 2855131 - 2854796 - | putative carboxysome-like ethanolaminosome structural protein with putative role in ethanol utilization TERM 3894 2854944 - 2854929 - G 70 -5.4 -4.39002 | overlap 2854917 AAACGGTCGAGAAAA CCGATA TGCA CATCGG CGGCTTTTAGTGCTA TERM 3895 2854966 - 2854980 + g 82 -11.4 -3.53761 | opp_overlap 2854965 2854962 TTAGTGCTAAATCAC CGGCGA TCA TCGCCG TTTCGCCGGGAGTTA TERM 3896 2855407 - 2855378 - R 100 -15.1 -4.27617 | opp_overlap 2855368, overlap 2855379 TATATTTCAGGAAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAGAATGA TERM 3897 2855406 - 2855379 - R 100 -18.6 -3.16088 | opp_overlap 2855368, overlap 2855378 ATATTTCAGGAAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAGAATG maeB 2857703 - 2855424 - | putative fused malic enzyme oxidoreductase ; putative phosphotransacetylase TERM 3898 2856861 - 2856874 + g 70 -3.8 -4.6635 | CAGCGCCAGGATCAT TGGC GCACGG GCCA TTTTCTTCACCATTT TERM 3899 2857142 - 2857152 + g 71 -3.2 -4.82901 | opp_overlap 2857131 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3900 2857767 - 2857739 - H 76 -6.1 -4.55697 | gap 1, opp_overlap 2857757 ACGTTCACAAATAAA GTGTGTGGGCAA CAGCCC CTGCCCACA-AC GTGGCGCACATTATT TERM 3901 2858461 - 2858502 + G 93 -8.7 -5.04325 | opp_overlap 2858444, overlap 2858462 GCAACCTGACGCTGC TGTTTTCTTTTGCCCAGGC GCGG GCCTGTGCAGAAGCAGGCG TTTTTCTGATTTCGC TERM 3902 2858462 - 2858501 + G 77 -10 -3.6151 | overlap 2858461 CAACCTGACGCTGCT GTTTTCTTTTGCCCAGGC GCGG GCCTGTGCAGAAGCAGGC GTTTTTCTGATTTCG talA 2857992 - 2858942 + | transaldolase A TERM 3903 2859264 - 2859248 - g 84 -7.9 -4.66163 | AGTTGCATTCAAAAA CCCCAGG TCA CCCGGAG ATTGGCTATACGCCA tktB 2858962 - 2860965 + | transketolase 2, thiamin-binding TERM 3904 2861109 - 2861086 - T 90 -12.4 -3.35798 | opp_overlap 2861100 ACGGGTGATCCACAA CGTGGGCCAG GCGT CTGGCCCATG CCAGTTATCACAGGT ypfG 2862111 - 2861068 - | hypothetical protein TERM 3905 2862110 - 2862099 - G 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAG CGCA TGGACGGTACGACCC yffH 2862812 - 2862237 - | putative NUDIX hydrolase aegA 2864859 - 2862880 - | fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit TERM 3906 2865083 - 2865105 + G 72 -7.6 -3.91792 | opp_overlap 2865080, overlap 2865083 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3907 2865083 - 2865106 + G 100 -5.2 -5.55698 | gap 1, opp_overlap 2865080, overlap 2865083 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3908 2865782 - 2865772 - g 71 -3.2 -4.81212 | overlap 2865774 GTCAGTAGAAGAAAA GACC CGC GATC TCCACGAGGCCAAGC narQ 2865065 - 2866765 + | sensory histidine kinase in two-component regulatory system with NarP (NarL) TERM 3909 2866988 - 2867007 + G 82 -2.8 -5.26875 | gap 1, overlap 2866990 2866991 GGCAATCCTGTTGTG TCTGACAGG TAC CCTGGC-GA TTTTTTCATTGCCCG TERM 3910 2868923 - 2868906 - g 70 -6.9 -4.11363 | AACAAGATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCGCCAGCAATT acrD 2866929 - 2870042 + | aminoglycoside/multidrug efflux system TERM 3911 2870082 - 2870047 - f 73 -9.2 -3.53444 | opp_overlap 2870053 2870054, overlap 2870054 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCCAATG TGTCGCCCTTTTCA ACTTTCCGATTAAGA TERM 3912 2870075 - 2870054 - f 100 -7.3 -5.57396 | opp_overlap 2870054 2870053, overlap 2870047 ATAAGCAATAAAAAA GGCGACA TGCCAATG TGTCGCC CTTTTCAACTTTCCG TERM 3913 2870090 - 2870120 + F 74 -7.6 -4.19307 | opp_overlap 2870096 2870099, overlap 2870092 2870093 2870096 2870099 CCTTTTCAACTTTCC GATTAAGAACCTGC TCA GCAGGTTCTTGCTG TTTGTACTTTGTCTC TERM 3914 2870092 - 2870118 + F 78 -10.2 -3.67823 | opp_overlap 2870096 2870099, overlap 2870090 2870093 2870096 2870099 TTTTCAACTTTCCGA TTAAGAACCTGC TCA GCAGGTTCTTGC TGTTTGTACTTTGTC TERM 3915 2870093 - 2870117 + F 86 -13.7 -2.79609 | opp_overlap 2870096 2870099, overlap 2870092 2870090 2870096 2870099 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCAGGTTCTTG CTGTTTGTACTTTGT TERM 3916 2870096 - 2870114 + F 100 -13.2 -3.52009 | opp_overlap 2870096 2870099, overlap 2870093 2870092 2870090 2870099 CAACTTTCCGATTAA GAACCTGC TCA GCAGGTTC TTGCTGTTTGTACTT TERM 3917 2870114 - 2870096 - f 91 -13.2 -3.14881 | opp_overlap 2870093 2870092 2870090 2870096 2870099, overlap 2870099 CAACTTTCCGATTAA GAACCTGC TCA GCAGGTTC TTGCTGTTTGTACTT TERM 3918 2870099 - 2870111 + F 79 -9.1 -3.87737 | opp_overlap 2870096 2870099, overlap 2870096 2870093 2870092 2870090 CTTTCCGATTAAGAA CCTGC TCA GCAGG TTCTTGCTGTTTGTA TERM 3919 2870111 - 2870099 - f 77 -9.1 -3.71848 | opp_overlap 2870099 2870096 2870093 2870092 2870090, overlap 2870096 CTTTCCGATTAAGAA CCTGC TCA GCAGG TTCTTGCTGTTTGTA TERM 3920 2870830 - 2870798 - g 81 -7 -4.64676 | opp_overlap 2870805 CCACCCGCAATAAAA TCATCGATGCGGCC TCTGC GGCGGCATTAATGA CTGAAATGCCTGCAA yffB 2870581 - 2870937 + | hypothetical protein dapE 2870941 - 2872068 + | N-succinyl-diaminopimelate deacylase ypfN 2872096 - 2872296 + | hypothetical protein ypfH 2873075 - 2872377 - | putative hydrolase ypfI 2875164 - 2873149 - | putative hydrolase TERM 3921 2873298 - 2873308 + g 79 -4.6 -4.96848 | opp_overlap 2873293 TGGTACATAACTGCG CGTC ACT GGCG TTTTTCTGTAAACGC TERM 3922 2874775 - 2874764 - G 72 -5.8 -4.38154 | AGATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA ypfJ 2876042 - 2875179 - | hypothetical protein TERM 3923 2875701 - 2875664 - G 72 -9.7 -3.30338 | opp_overlap 2875672 AGAACGGCCCCATAA TGGACTGGCCCGCCCCG CAGC CGGTGCGCGTCATTCCA CGGTACATGACCAGC purC 2876923 - 2876210 - | phosphoribosylaminoimidazole-succinocarboxamide synthetase TERM 3924 2876274 - 2876310 + g 72 -5.7 -4.55295 | opp_overlap 2876287, overlap 2876270 2876276 ATCAGGCCACCGAGG CTCTGGCGGAAACGGTC TTT GTCCATTTTCTCCAGCG TTTCTTTGTCCCACA TERM 3925 2877105 - 2877132 + r 74 -4 -4.90266 | opp_overlap 2877109, overlap 2877107 2877109 CGTATCATATCAGAA AAAAGGGCCGGA TGAC TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3926 2877107 - 2877130 + r 70 -6.6 -4.07008 | opp_overlap 2877109, overlap 2877105 2877109 TATCATATCAGAAAA AAGGGCCGGA TGAC TCCAGCCCTG TATTTTTACTTGCTA TERM 3927 2877128 - 2877109 - R 100 -11.4 -5.34555 | opp_overlap 2877107 2877105 2877109 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC TERM 3928 2877109 - 2877128 + r 75 -9.2 -3.61182 | opp_overlap 2877109, overlap 2877107 2877105 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC nlpB 2878170 - 2877136 - | lipoprotein TERM 3929 2877310 - 2877328 + g 76 -11 -3.41878 | GCCCAGTTCCTGCCA GTCGCTGT CAG ACAGCGGC TTGTAAGTTACGGCC TERM 3930 2877759 - 2877787 + g 77 -6 -4.62069 | opp_overlap 2877740, overlap 2877762 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2879065 - 2878187 - | dihydrodipicolinate synthase gcvR 2879211 - 2879783 + | DNA-binding transcriptional repressor, regulatory protein accessory to GcvA bcp 2879783 - 2880253 + | thiol peroxidase, thioredoxin-dependent TERM 3931 2881064 - 2881052 - g 82 -2.6 -5.35815 | CAGATGAAAGAAAAA CAGC GCATT GCCG CAAGCTGGTTTGCCA TERM 3932 2881085 - 2881097 + G 73 -9.1 -3.6682 | TGGTTTGCCAATGGC GGGGA GGA TCCCC TTTCCCTCACTCAGG hyfA 2880506 - 2881123 + | hydrogenase 4, 4Fe-4S subunit hyfB 2881123 - 2883141 + | hydrogenase 4, membrane subunit TERM 3933 2883742 - 2883754 + G 72 -7.7 -3.95022 | CTGCTTCATTGAGAT GGGAA AAA TTCCC TTTGATGTTGCTGAA TERM 3934 2884002 - 2884017 + G 79 -2.4 -5.2189 | opp_overlap 2884000 CAATCGCAGAAAACA CGCTGG CACG CGGGCG TTTTTTACTCATTCA hyfC 2883152 - 2884099 + | hydrogenase 4, membrane subunit TERM 3935 2885276 - 2885288 + G 73 -9.1 -3.69283 | opp_overlap 2885266 AATTACCGGCGTGCC GCCGT TCA ACGGC TTCTTCAGTAAATTC hyfD 2884116 - 2885555 + | hydrogenase 4, membrane subunit hyfE 2885567 - 2886217 + | hydrogenase 4, membrane subunit TERM 3936 2887112 - 2887124 + G 95 -9.1 -4.94972 | CGGCATGTTGTCGGT TGCCG TGG CGGCA TTTTTCATTCTGGTA TERM 3937 2887378 - 2887425 + G 77 -3.2 -5.06816 | CATTTACCGCCGTGT TGTTTGGCGGCGGTGCGCTGGC GCTG GCCGGGATGCCGCCCTTCAACA TTTTTCTTAGCGAAT hyfF 2886222 - 2887802 + | hydrogenase 4, membrane subunit hyfG 2887840 - 2889507 + | hydrogenase 4, subunit hyfH 2889517 - 2890062 + | hydrogenase 4, Fe-S subunit hyfI 2890059 - 2890817 + | hydrogenase 4, Fe-S subunit TERM 3938 2891210 - 2891188 - g 77 -11.3 -3.16055 | GAAATTGTGCAGGAA CCGGCCATC TATCT GATGGCCAG AAAAATTGCGTGAGA hyfJ 2890810 - 2891223 + | putative processing element hydrogenase 4 hyfR 2891253 - 2893265 + | DNA-binding transcriptional activator, formate sensing TERM 3939 2893357 - 2893332 - g 93 -10.5 -4.38712 | gap 1 TTGAGCGCCAGAAAA GCGGCAAT-CGC TGA ACGGATTGCCGC CCATAAAATTGCCCG focB 2893287 - 2894135 + | putative formate transporter TERM 3940 2894133 - 2894174 + T 83 -10.9 -3.64283 | opp_overlap 2894139, overlap 2894136 2894137 TTACGTCAGGAACCC TAAAAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGATTA TTCTTGCGCGATTTG TERM 3941 2894136 - 2894171 + T 72 -8.2 -3.94877 | opp_overlap 2894139, overlap 2894133 2894137 CGTCAGGAACCCTAA AAATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAGA TTATTCTTGCGCGAT TERM 3942 2894137 - 2894170 + T 80 -11.7 -2.96444 | opp_overlap 2894139, overlap 2894136 2894133 GTCAGGAACCCTAAA AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG ATTATTCTTGCGCGA TERM 3943 2894168 - 2894139 - T 100 -16.5 -4.67904 | opp_overlap 2894137 2894136 2894133 CAGGAACCCTAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA AGATTATTCTTGCGC perM 2895233 - 2894172 - | putative permease yfgC 2895446 - 2896909 + | putative peptidase yfgD 2896930 - 2897289 + | putative oxidoreductase hda 2898141 - 2897395 - | ATPase regulatory factor involved in DnaA inactivation TERM 3944 2898151 - 2898193 + r 76 -7.7 -4.26393 | opp_overlap 2898147, overlap 2898157 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2899480 - 2898191 - | uracil transporter TERM 3945 2898561 - 2898535 - G 72 -8.6 -3.767 | overlap 2898550 TACCGACGCAGGAAA GCAGGATAGCGA AAA TCGCCGCCCCGC CGATAACCCAGGTAC TERM 3946 2898700 - 2898715 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3947 2899521 - 2899555 + r 84 -4.3 -5.44198 | opp_overlap 2899529, overlap 2899524 2899529 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3948 2899524 - 2899552 + r 80 -6 -4.74161 | opp_overlap 2899529, overlap 2899521 2899529 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3949 2899529 - 2899547 + r 85 -10.3 -4.2711 | opp_overlap 2899529, overlap 2899524 2899521 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT TERM 3950 2899547 - 2899529 - R 100 -11 -5.81412 | opp_overlap 2899524 2899521 2899529 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT upp 2900192 - 2899566 - | uracil phosphoribosyltransferase TERM 3951 2899700 - 2899727 + g 72 -8.4 -3.80573 | overlap 2899701 CCAGCGCTGCGATAC CTTCTGGTGCAG CTAC CAGCACCAGAAC TTTGATGCTGCTGCA TERM 3952 2899701 - 2899726 + g 75 -11.9 -2.88023 | overlap 2899700 CAGCGCTGCGATACC TTCTGGTGCAG CTAC CAGCACCAGAA CTTTGATGCTGCTGC purM 2900517 - 2901554 + | phosphoribosylaminoimidazole synthetase TERM 3953 2901695 - 2901664 - g 100 -13.7 -3.72027 | opp_overlap 2901686 2901690, overlap 2901661 AGTTTTCAGCAATAA GGCCGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3954 2901690 - 2901702 + G 72 -10.5 -3.02144 | opp_overlap 2901664, overlap 2901686 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACGCATAC purN 2901554 - 2902192 + | phosphoribosylglycinamide formyltransferase 1 TERM 3955 2902229 - 2902210 - f 74 -10.7 -2.78679 | opp_overlap 2902210, overlap 2902209 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3956 2902210 - 2902229 + F 95 -10.7 -4.74504 | opp_overlap 2902209 2902210 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3957 2904200 - 2904163 - g 70 -6.9 -4.10657 | overlap 2904164 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2902364 - 2904430 + | polyphosphate kinase, component of RNA degradosome TERM 3958 2904458 - 2904484 + G 74 -10.8 -3.23853 | overlap 2904456 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2904435 - 2905976 + | exopolyphosphatase TERM 3959 2905982 - 2906010 + T 100 -19 -3.6279 | overlap 2906003 2906003 CGCCGCTTAATGCTT TGCAGGCCGACA AGAAA TGTCGGCCTGCA TTATTCAGGCACTTT yfgF 2908258 - 2906015 - | conserved hypothetical protein; putative inner membrane protein TERM 3960 2907605 - 2907616 + g 87 -4.4 -5.19261 | TAATGCCAGTAGCCA GAGT GCGA ACTC TTTTTTGGTGACTTT TERM 3961 2908143 - 2908132 - G 82 -2.2 -5.32599 | overlap 2908124 GATAAAAGAGAAAAA CCTC ACCG GAAG AAATATGCGCGAAAG ECUMN_2818 2908765 - 2908475 - | hypothetical protein yfgH 2909112 - 2909630 + | putative outer membrane lipoprotein yfgI 2909646 - 2910185 + | hypothetical protein TERM 3962 2910254 - 2910230 - T 86 -9.9 -4.35483 | opp_overlap 2910233, overlap 2910232 2910233 CGTGAGTATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAAATGCGCCTAT TERM 3963 2910252 - 2910232 - T 100 -12.5 -3.78004 | opp_overlap 2910233, overlap 2910230 2910233 TGAGTATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAAATGCGCCT TERM 3964 2910233 - 2910251 + T 100 -16 -4.62069 | opp_overlap 2910233 2910232 2910230 GAGTATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC TERM 3965 2910251 - 2910233 - T 100 -16 -2.86079 | opp_overlap 2910233, overlap 2910232 2910230 GAGTATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC ECUMN_2821 2910842 - 2910333 - | transposase IS605 family, IS200 group ECUMN_2822 2910936 - 2910748 - | hypothetical protein TERM 3966 2910904 - 2910922 + gr 100 -16 -4.52589 | overlap 2910918 2910920 GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCTGTGCACAAA TERM 3967 2910936 - 2910965 + gr 90 -12.3 -3.41693 | opp_overlap 2910941, overlap 2910920 2910918 2910941 GGTTTTCTGTGCACA AAAAACCCTCTGT AGTA ACAGAGGGTTTTG TTCATTCATAGTGCA TERM 3968 2910960 - 2910941 - R 100 -12.2 -5.24129 | opp_overlap 2910920 2910918 2910936 2910941 TCTGTGCACAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA TERM 3969 2910941 - 2910960 + r 100 -12.2 -4.80178 | opp_overlap 2910941, overlap 2910920 2910918 2910936 TCTGTGCACAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA guaA 2912566 - 2910989 - | GMP synthetase (glutamine aminotransferase) TERM 3970 2912628 - 2912606 - R 100 -14.9 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA GTCGGGCGA AGAGAATCAGGAGCC guaB 2914101 - 2912635 - | IMP dehydrogenase TERM 3971 2913553 - 2913567 + g 73 -4.2 -4.79667 | overlap 2913564 GTCATCAACCACCAG CGCTTT TTC AACGCG TTTTTCGTGCATTTT TERM 3972 2913823 - 2913837 + g 74 -2.8 -5.00616 | CTGCGGGTCAGTCAC CACG CCAGATT CGTG TTTTTTCACACGGCG TERM 3973 2915408 - 2915383 - g 81 -10.4 -3.85817 | overlap 2915401 ATCGCCTGGCAGAAA CGTTGCGCGC GCAACT GAGCGCAACG CGAGAACGGTTTGGT TERM 3974 2915617 - 2915605 - g 86 -6.2 -5.06414 | GCGCCGTAACAAAAA CGCG TAAAC CGCG TAAGAAAGCTGCTAA xseA 2914263 - 2915639 + | exonuclease VII, large subunit TERM 3975 2915646 - 2915698 + T 70 -9.3 -3.14211 | gap 3, opp_overlap 2915640 2915642 2915643 AATCCATAAGATGCG CCAGCAT--CGCATCCGGCACTGGCT CCCA GGCCAC-GCCAGATGCGCCATGCTGG TTACTGGAAGCAGGT TERM 3976 2916345 - 2916364 + T 75 -9.2 -3.58269 | opp_overlap 2916329 GTCGCCCCAGCGTTA CGCGGCGA TGCA TCGCCACG TTTCAAAGTAAATTC TERM 3977 2917296 - 2917311 + T 79 -8.2 -4.371 | overlap 2917290 GATGCCGAAGGTGTG CCGCCG TTAC TGGCGG TTTTCGTCTCATCAA TERM 3978 2917455 - 2917441 - T 76 -10 -3.38046 | overlap 2917439 TGCTTAGGTTAAAGA CCTGGT AAT ACCAGG AGCTACCATTGGAGT TERM 3979 2918933 - 2918962 + T 74 -2 -5.2696 | overlap 2918934 TCCCTGCGCATCTTT TGTCACCACGCG AATCAC CGCGTCGTCACC TTTTTTCCGTTTTAG TERM 3980 2919090 - 2919076 - T 70 -10 -2.59748 | overlap 2919072 TAGCCCGACAACTTA GCAGTC CTA GACTGC TTGACATGACCTCCG TERM 3981 2920553 - 2920576 + T 70 -3 -4.98531 | AACCGGCGCAACCAG CGCATCACCG CTAC CGGCAATGTG TTTTTCATTTGAGCG TERM 3982 2920677 - 2920687 + T 71 -2.4 -5.09426 | GTCACCTTCACCTGT AGCG TTT CGCC TTTTTTCAGCTTCGC TERM 3983 2923775 - 2923831 + T 70 -8.9 -3.17194 | opp_overlap 2923786 2923819 2923827 TGTTAAACGGACGCT TGTCGCATCAACATATTTTGCTTAATC CGG GATTAAGCAAAATATGCGGAAACAGCA TTCCCTTGCGGGAAT TERM 3984 2923820 - 2923786 - T 100 -19 -3.14132 | opp_overlap 2923775, overlap 2923819 CGCTTGTCGCATCAA CATATTTTGCTTAATC CGG GATTAAGCAAAATATG CGGAAACAGCATTCC TERM 3985 2923850 - 2923827 - T 100 -15.4 -3.63589 | opp_overlap 2923775, overlap 2923819 CAAAATATGCGGAAA CAGCATTCCC TTGC GGGAATGCTG CTGAGTACGCGTTAT ECUMN_2828 2924839 - 2923862 - | putative outer membrane protein (sivI-like) TERM 3986 2924875 - 2924893 + r 71 -4.5 -4.69962 | overlap 2924878 CTTCAGCGACTGGCC GACTGGC CTTAC GCCAATC TTATTTTTTGGTATA ECUMN_2829 2927101 - 2924894 - | putative intimin ((attaching and effacing protein) or invasin protein (sivH-like) TERM 3987 2925352 - 2925365 + g 74 -2.3 -5.11389 | overlap 2925347 GTAAGGTACTGGAGA GGGTG ACAG TGCCC TTTTCTTTATCTTGT TERM 3988 2926328 - 2926312 - G 72 -4.3 -4.72986 | opp_overlap 2926312, overlap 2926313 TATCCGTACCAAAAA GGGCGAC TTC ATCGCCG TAATATTGCTCGAAG TERM 3989 2927001 - 2927038 + g 100 -20.1 -3.07043 | opp_overlap 2927001 TCGTTTTGCTTAACA TTTATCTCTGGTGCCGC GAAA GCAGCACCAGAGATAAA TGTTAGAATAATACA TERM 3990 2927038 - 2927001 - G 100 -22.3 -3.01712 | opp_overlap 2927001 TCGTTTTGCTTAACA TTTATCTCTGGTGCCGC GAAA GCAGCACCAGAGATAAA TGTTAGAATAATACA TERM 3991 2927265 - 2927225 - R 74 -9.4 -3.29142 | opp_overlap 2927225, overlap 2927223 2927221 TCCACTAATAACAGA TTGTTTTACCATTCACAT ATTAA ATATAAATGATAAAACAA TATATTCACATGATA ECUMN_2830 2927496 - 2927281 - | hypothetical protein TERM 3992 2927512 - 2927555 + r 72 -10.4 -2.89028 | opp_overlap 2927552, overlap 2927508 2927552 AAATACTCCTCGCGT GTTATTCGGTTTCCCTCTCC GTGT GGAAAGGGAAACCAGATAAG TGATTACTTACTTTT der 2929031 - 2927559 - | GTPase involved in ribosome synthesis and maintenance TERM 3993 2929129 - 2929098 - R 100 -13.8 -3.90048 | opp_overlap 2929104, overlap 2929099 2929104 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3994 2929128 - 2929099 - R 100 -17.3 -2.93708 | opp_overlap 2929104, overlap 2929098 2929104 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3995 2929104 - 2929123 + r 80 -9.2 -4.11216 | opp_overlap 2929099 2929098 2929104 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3996 2929123 - 2929104 - R 100 -11.4 -4.60746 | opp_overlap 2929104, overlap 2929099 2929098 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG yfgL 2930327 - 2929149 - | protein assembly complex, lipoprotein component TERM 3997 2929575 - 2929559 - G 78 -8.7 -4.18506 | overlap 2929571 CCAGCGCGAAAACAA CGCCGTT AAC AACGACG GGAGTCGTGTCAACA TERM 3998 2929731 - 2929720 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC yfgM 2930958 - 2930338 - | hypothetical protein TERM 3999 2930501 - 2930519 + g 77 -8.2 -4.07687 | GCAGCCCACCCTTCA CCTTTGAT GGT ATCAAGGG TTTTCAGCGCGGCAT TERM 4000 2930770 - 2930782 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2932250 - 2930976 - | histidyl tRNA synthetase TERM 4001 2932214 - 2932239 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 4002 2932323 - 2932277 - R 73 -3 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCC TCAATGTTTC GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 4003 2932352 - 2932332 - R 86 -13.3 -3.00298 | opp_overlap 2932326 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2933479 - 2932361 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase yfgA 2934519 - 2933506 - | conserved hypothetical protein; putative HTH-type transcriptional regulator TERM 4004 2934799 - 2934762 - R 95 -12.2 -4.42653 | gap 1, overlap 2934764 ACTTCATTCATAAAA GATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT TERM 4005 2934797 - 2934764 - R 100 -14.8 -3.82117 | gap 1, overlap 2934762 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC yfgB 2935958 - 2934804 - | putative Fe-S containing enzyme TERM 4006 2936047 - 2936016 - R 91 -8.7 -5.04249 | gap 2, opp_overlap 2936015 2936012 2936011, overlap 2936018 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT TERM 4007 2936044 - 2936018 - R 71 -10.1 -2.75795 | gap 1, opp_overlap 2936015 2936012 2936011, overlap 2936016 TTGAAAAAAGAAACG CCCCGG-TGAGC GGCT GCTCGTCCGGGG GCGCTGCATTGTACA ndk 2936539 - 2936108 - | multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase pbpC 2939000 - 2936688 - | fused transglycosylase ; transpeptidase TERM 4008 2937074 - 2937090 + g 76 -8 -4.25104 | opp_overlap 2937073 CCTGAGGGCAATCAG CGGCAA CACGT TTGCCG TTTTCATCCAGCCAG TERM 4009 2938950 - 2938979 + g 86 -10.6 -3.90112 | opp_overlap 2938948 2938947, overlap 2938973 2938974 AAAAAGGAGAAAGGG CGCGGCTGCCAG CGTTAT CCAGCAGCCGCG TTTGGTTAACAGGCG yfhM 2943962 - 2939001 - | hypothetical protein TERM 4010 2939276 - 2939286 + g 72 -6.8 -4.19238 | overlap 2939260 2939255 TGGCGCTACCGTTCG CCAG GTT CTGG TTTTCCAGTTCCAGA TERM 4011 2941538 - 2941496 - G 74 -10.9 -3.27408 | gap 2, overlap 2941494 GCGTACTTAAATACA GATCATGACGATTCCAGGT TTTATCG ACC-GGAATCGTCA-GATC CAGCCCTTGAGCCCG TERM 4012 2942896 - 2942916 + g 79 -3.9 -5.09245 | GTCTGACCGTCTTTA CGCGCCA ACAGTAA TGCCGCG TTTTTATCATTTTCC TERM 4013 2944879 - 2944907 + G 70 -3.7 -4.64676 | overlap 2944882 ACCGATTATCGTCAG CTGCGGCTCTGGT GTA ACGGCAGCCGTGG TTTTGTTGGCACTCG sseA 2944169 - 2945014 + | 3-mercaptopyruvate sulfurtransferase TERM 4014 2945023 - 2945066 + T 100 -18.4 -2.90194 | opp_overlap 2945015 2945030 2945037, overlap 2945026 2945030 2945037 AAAATAAGCTTTTTA CAGGCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 4015 2945026 - 2945063 + T 100 -20.9 -2.69964 | opp_overlap 2945015 2945030 2945037, overlap 2945023 2945030 2945037 ATAAGCTTTTTACAG GCAATAAAAAACCGCCG AATT TGGCGGTTTTTTATTGC TGGTCTGGTTCGCGG TERM 4016 2945059 - 2945030 - T 87 -13.8 -3.12351 | opp_overlap 2945026 2945023 2945030 2945037, overlap 2945015 2945037 GCTTTTTACAGGCAA TAAAAAACCGCC GAATTT GGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 4017 2945030 - 2945059 + T 95 -14.5 -3.26433 | opp_overlap 2945015 2945030 2945037, overlap 2945026 2945023 2945037 GCTTTTTACAGGCAA TAAAAAACCGCCG AATT TGGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 4018 2945037 - 2945052 + T 100 -8.2 -5.52023 | opp_overlap 2945037 2945030, overlap 2945030 2945026 2945023 ACAGGCAATAAAAAA CCGCCG AATT TGGCGG TTTTTTATTGCTGGT TERM 4019 2945052 - 2945037 - T 100 -7.5 -5.49234 | opp_overlap 2945030 2945026 2945023 2945037, overlap 2945030 ACAGGCAATAAAAAA CCGCC GAATTT GGCGG TTTTTTATTGCTGGT TERM 4020 2945329 - 2945293 - T 100 -18.3 -3.53811 | opp_overlap 2945296 2945303, overlap 2945296 2945303 TTCACTTTCTTTAAA CAACAAAAAACCGCC AAAATCA GGCGGTTTTTTGTTG CTGGTCCGGTTCGCG TERM 4021 2945326 - 2945296 - T 100 -14.2 -3.90922 | opp_overlap 2945296 2945303, overlap 2945293 2945303 ACTTTCTTTAAACAA CAAAAAACCGCC AAAATCA GGCGGTTTTTTG TTGCTGGTCCGGTTC TERM 4022 2945296 - 2945326 + T 95 -14.2 -3.22223 | opp_overlap 2945296 2945293 2945303, overlap 2945303 ACTTTCTTTAAACAA CAAAAAACCGCC AAAATCA GGCGGTTTTTTG TTGCTGGTCCGGTTC TERM 4023 2945303 - 2945319 + T 100 -6.5 -5.52023 | opp_overlap 2945296 2945293 2945303, overlap 2945296 TTAAACAACAAAAAA CCGCC AAAATCA GGCGG TTTTTTGTTGCTGGT TERM 4024 2945319 - 2945303 - T 100 -6.5 -5.72254 | opp_overlap 2945303 2945296, overlap 2945296 2945293 TTAAACAACAAAAAA CCGCC AAAATCA GGCGG TTTTTTGTTGCTGGT TERM 4025 2945699 - 2945685 - T 91 -11.4 -4.10744 | CGAGGTAAATAATAA CCGGAG TCT CTCCGG CAACAATTTACTGGT TERM 4026 2945748 - 2945771 + T 100 -12.4 -4.3208 | opp_overlap 2945743, overlap 2945750 CAGCAAGTAAGCCCG AATGCCGCCC TTTG GGGCGGCATA TTTTAGATTATCCGA TERM 4027 2945750 - 2945769 + T 100 -15 -3.76167 | opp_overlap 2945743, overlap 2945748 GCAAGTAAGCCCGAA TGCCGCCC TTTG GGGCGGCA TATTTTAGATTATCC sseB 2946550 - 2945774 - | rhodanase-like enzyme, sulfur transfer from thiosulfate TERM 4028 2946279 - 2946308 + g 83 -13 -3.02263 | opp_overlap 2946276, overlap 2946283 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCACCTGT TERM 4029 2946610 - 2946588 - R 74 -10.6 -2.82623 | overlap 2946585 TTCGGGGCACAAGTA CCTGATACGC CAC GCTTATCAGG CCTACAAGGGAGTCG TERM 4030 2946651 - 2946686 + r 88 -11.8 -3.51976 | opp_overlap 2946663, overlap 2946647 2946654 GATTTTCGCAATTTG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA TTAGTTTACGCCGTT TERM 4031 2946654 - 2946683 + r 86 -13.5 -2.59569 | opp_overlap 2946663, overlap 2946651 2946647 TTTCGCAATTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATATTAGTTTACGCC pepB 2947975 - 2946692 - | aminopeptidase B TERM 4032 2946848 - 2946827 - G 70 -6.5 -4.16284 | gap 1, overlap 2946828 2946839 ATAGTTCTCAACAAA GTGCGACAGG AAG CCCGCCGC-C GTGCTCGCGCCTGCC TERM 4033 2948018 - 2947999 - R 100 -12.8 -4.07568 | TCCTTCTTTGTAAAA GGGCCGCC AGTT GGCAGCCC CAGGATTTTTCCGCT yfhJ 2948420 - 2948220 - | hypothetical protein fdx 2948767 - 2948432 - | [2Fe-2S] ferredoxin hscA 2950619 - 2948769 - | DnaK-like molecular chaperone specific for IscU TERM 4034 2950100 - 2950112 + g 76 -9.1 -3.74693 | CGTGAAGGCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2951151 - 2950636 - | DnaJ-like molecular chaperone specific for IscU TERM 4035 2951231 - 2951205 - R 89 -8.7 -4.6951 | gap 1, opp_overlap 2951205 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2951570 - 2951247 - | FeS cluster assembly protein iscU 2951973 - 2951587 - | scaffold protein iscS 2953215 - 2952001 - | cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent iscR 2953815 - 2953327 - | DNA-binding transcriptional repressor TERM 4036 2953711 - 2953701 - G 75 -6.8 -4.38927 | GTTCCAGATAAGAAA GGGA AAT TCCC TGACGTTCGGAAATA TERM 4037 2953838 - 2953850 + r 100 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 4038 2953900 - 2953947 + r 72 -8.6 -3.6715 | overlap 2953902 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 4039 2953902 - 2953945 + r 83 -11.2 -3.4149 | overlap 2953900 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT yfhQ 2954825 - 2954085 - | putative methyltransferase TERM 4040 2954243 - 2954233 - G 72 -4.6 -4.71426 | opp_overlap 2954236 TTTTCACGAATAAAA CCGG TTG CCAG CAGCGTTTGTTCGAG TERM 4041 2954709 - 2954746 + g 85 -10.1 -4.25104 | gap 1, opp_overlap 2954720 2954729, overlap 2954699 2954712 GGAGTCAGGTTTCAC CAGT-GGATTAACCAACC ACA GATTGGTTAATCCCATTG TTTTCATGGCACGGG TERM 4042 2954712 - 2954743 + g 78 -8.2 -4.25256 | gap 1, opp_overlap 2954720 2954729, overlap 2954709 GTCAGGTTTCACCAG T-GGATTAACCAACC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 4043 2954962 - 2954990 + G 79 -12.3 -3.02166 | opp_overlap 2954963, overlap 2954958 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 4044 2954989 - 2954963 - g 87 -13.6 -3.04263 | opp_overlap 2954962 2954958 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2954944 - 2955747 + | inositol monophosphatase yfhR 2955892 - 2956746 + | putative peptidase csiE 2956937 - 2958217 + | stationary phase inducible protein hcaT 2959348 - 2958209 - | putative 3-phenylpropionic transporter TERM 4045 2958489 - 2958473 - G 70 -10.1 -3.23216 | opp_overlap 2958473 2958476 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC TERM 4046 2958754 - 2958731 - G 86 -11 -3.9009 | overlap 2958722 2958751 AACGCAGGCCAGAAA GCGCCAGTTC TGGC GAACCAGCGC CAACCACGCAGACCA TERM 4047 2959494 - 2959470 - R 73 -4.9 -4.71382 | opp_overlap 2959471, overlap 2959471 ACAAGCACTCAAAAA CTGCGACCTGC GAC GCATGTTGCAA AAATAATGCGTAATT hcaR 2960398 - 2959508 - | DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism hcaE 2960534 - 2961895 + | 3-phenylpropionate dioxygenase, large (alpha) subunit hcaF 2961892 - 2962410 + | 3-phenylpropionate dioxygenase, small (beta) subunit TERM 4048 2962585 - 2962612 + G 75 -5.5 -4.65895 | gap 1, opp_overlap 2962580, overlap 2962585 2962586 TGGAAGATGACGCCA C-GGTGGAGTGC CCGCT GCACGCCGCCAG TTTTTGCCTGAAAAC hcaC 2962410 - 2962730 + | 3-phenylpropionate dioxygenase, putative ferredoxin subunit TERM 4049 2963180 - 2963158 - g 100 -16.2 -3.59262 | TTTCACACTGTCAAA CGCCGCCTGG TAT CCCGGCGGCG GTGGCCCGCTGTACA hcaB 2962727 - 2963539 + | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase TERM 4050 2963877 - 2963896 + G 76 -10.7 -3.40371 | TTATGGCAACCGGCG CGGCAGC CCGACC GCTGCCG TTGCTTGATGCACTG hcaD 2963549 - 2964751 + | phenylpropionate dioxygenase, ferredoxin reductase subunit yphA 2964803 - 2965270 + | conserved hypothetical protein; putative inner membrane protein TERM 4051 2965309 - 2965274 - T 100 -11.8 -4.57073 | opp_overlap 2965276, overlap 2965276 GATCGGCGTTAAAAA CATGCCGGATGCGGCG TGAA CGCCTTATCCGGCATT TTATAAATTACAGTA TERM 4052 2965307 - 2965276 - T 100 -14.4 -3.90048 | opp_overlap 2965276, overlap 2965274 TCGGCGTTAAAAACA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG TERM 4053 2965276 - 2965307 + T 100 -16.6 -4.4715 | opp_overlap 2965276 2965274 TCGGCGTTAAAAACA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG yphB 2966189 - 2965317 - | hypothetical protein yphC 2967262 - 2966201 - | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 4054 2967293 - 2967320 + r 91 -11.2 -3.85567 | opp_overlap 2967289 AATACGATTAATTTT CATCCCTGCCGC ACCC GCGCCAGGGACG TTTAGGTTTAGCGTT yphD 2968326 - 2967328 - | putative sugar transporter subunit: membrane component of ABC superfamily yphE 2969862 - 2968351 - | fused putative sugar transporter subunits of ABC superfamily: ATP-binding components TERM 4055 2968815 - 2968828 + g 70 -5.2 -4.41548 | overlap 2968802 GCCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAG yphF 2970868 - 2969885 - | putative sugar transporter subunit: periplasmic-binding component of ABC superfamily yphG 2974246 - 2970965 - | hypothetical protein TERM 4056 2972642 - 2972654 + g 95 -9.1 -5.06414 | AATCAAACTCGCCTG TCCGC ACT GCGGA TTTTTGTTCAGCGCA yphH 2974364 - 2975557 + | putative DNA-binding transcriptional regulator TERM 4057 2975594 - 2975577 - T 91 -11.3 -4.00066 | opp_overlap 2975577 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCACAAAC TERM 4058 2975577 - 2975594 + T 81 -11.3 -3.21099 | opp_overlap 2975577 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCACAAAC glyA 2977008 - 2975755 - | serine hydroxymethyltransferase TERM 4059 2976002 - 2976012 + g 74 -8.2 -3.92542 | TTAGCACGGCCCAGA GCGG CGT CCGC TTCTTTACCGGTCAG TERM 4060 2976494 - 2976510 + g 70 -5.1 -4.40333 | opp_overlap 2976494 TATGCAGAGAAGCCA CCGATAA TCA TTTTCGG TTTGTGTTCTTTGGC TERM 4061 2977778 - 2977762 - g 72 -5.7 -4.50661 | overlap 2977764 2977773 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GCTGGAAAGGTACTC hmp 2977337 - 2978527 + | fused nitric oxide dioxygenase ; dihydropteridine reductase 2 glnB 2978910 - 2978572 - | regulatory protein P-II for glutamine synthetase yfhA 2980305 - 2978971 - | putative DNA-binding response regulator in two-component system TERM 4062 2979680 - 2979670 - G 72 -8.2 -3.74251 | overlap 2979671 GACAGCGCCAGTAAA CGCG CCA CGCG CATGACCAAACAGTT TERM 4063 2980033 - 2980008 - G 76 -4 -5.01811 | gap 1, overlap 2980009 TGAGGAAACTAAAAA CGCC-CTGCTG TGTTG CAGCAACGGCA TCGGGAATAGAACCA yfhG 2981008 - 2980295 - | hypothetical protein yfhK 2982600 - 2981173 - | putative sensory kinase in two-component system TERM 4064 2981803 - 2981813 + g 79 -4.6 -4.90266 | GCCCTCGCGCATACT TGCC AGC GGCG TTTTTAATTCATGAG TERM 4065 2982688 - 2982658 - R 100 -16.3 -2.91681 | opp_overlap 2982661 2982665, overlap 2982661 2982665 GGGGAAGTTCAGATA CAACAAAGCCGGG AATTA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 4066 2982685 - 2982661 - R 100 -15.8 -3.60412 | opp_overlap 2982661 2982665, overlap 2982658 2982665 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 4067 2982661 - 2982685 + r 100 -15.8 -3.32844 | opp_overlap 2982661 2982658 2982665, overlap 2982665 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 4068 2982681 - 2982665 - R 90 -10.8 -4.42974 | opp_overlap 2982661 2982665, overlap 2982661 2982658 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 4069 2982665 - 2982681 + r 90 -10.8 -4.32177 | opp_overlap 2982665 2982661 2982658, overlap 2982661 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 4070 2983039 - 2983022 - R 72 -7.7 -3.87062 | AATCAATAAGTTAAA TGTCGCC AGAA AGCGACA CGGCACACCACCCAT TERM 4071 2983097 - 2983080 - R 100 -8.4 -5.4492 | opp_overlap 2983080 TACAGACACAAAAAA GCTCCC GAAGTT GGGAGC TTATAATAGCGGTTG TERM 4072 2983080 - 2983097 + r 71 -9.1 -3.41527 | opp_overlap 2983080 TACAGACACAAAAAA GCTCCCG AAGT TGGGAGC TTATAATAGCGGTTG purL 2987063 - 2983176 - | phosphoribosylformyl-glycineamide synthetase TERM 4073 2985201 - 2985211 + g 70 -6.8 -4.05446 | CAGCGCATCACCCTT CGCT TTC AGCG TTTGTACTTCGCGGG TERM 4074 2985867 - 2985878 + g 74 -2.2 -5.14163 | overlap 2985861 2985860 CAGCTCTTCGCCATT GTGG CTGT TCAC TTTTTCTTCATAAGT TERM 4075 2987340 - 2987330 - H 76 -2.6 -5.1848 | opp_overlap 2987330 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG TERM 4076 2988616 - 2988636 + G 74 -10.4 -3.49102 | GACTTACGGCTACGC GCGTGGGC ATGAA GCCTACGC TTATGTCGAAAATAT yfhD 2987459 - 2988877 + | putative transglycosylase tadA 2989410 - 2988874 - | tRNA-specific adenosine deaminase yfhB 2990070 - 2989435 - | hypothetical protein TERM 4077 2989701 - 2989686 - G 74 -6.1 -4.46112 | overlap 2989698 GCGTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 4078 2990066 - 2990044 - G 86 -6.2 -5.16572 | overlap 2990047 2990049 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT yfhH 2990279 - 2991127 + | fused putative DNA-binding transcriptional regulator; putative isomerase yfhL 2991183 - 2991443 + | ferredoxin (4Fe-4S cluster-containing protein) (fdx-like) TERM 4079 2991618 - 2991589 - T 100 -13.5 -3.86944 | opp_overlap 2991589 TTTATAATTATTAAA GGCGCGCCTGGCT GGTT AACCTGACGCGCC TTAAGTACGTTTCCT ECUMN_2883 2991879 - 2991715 - | hypothetical protein TERM 4080 2992121 - 2992071 - R 93 -13.5 -3.15405 | opp_overlap 2992078 2992084, overlap 2992078 TGCACAAAATTAAAG TTAAAAAGTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTACTTTATAA AGAGAACGGTATTTT TERM 4081 2992114 - 2992078 - R 100 -11.6 -4.83759 | opp_overlap 2992078 2992084, overlap 2992071 AATTAAAGTTAAAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTATAAAGAGAACG TERM 4082 2992078 - 2992114 + r 85 -10.9 -3.85698 | opp_overlap 2992078 2992071, overlap 2992084 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTATAAAGAGAACG acpS 2992518 - 2992138 - | holo-[acyl-carrier-protein] synthase 1 TERM 4083 2992394 - 2992376 - G 78 -7.4 -4.36914 | opp_overlap 2992376 CGCTTCGCCAGAAAA CGCACC GGCTGGT GGTGCG TTTTCCAGATTGCCC TERM 4084 2992376 - 2992394 + g 74 -8.1 -4.14392 | opp_overlap 2992376 CGCTTCGCCAGAAAA CGCACCG GCTGG TGGTGCG TTTTCCAGATTGCCC pdxJ 2993249 - 2992518 - | pyridoxine 5'-phosphate synthase recO 2993989 - 2993261 - | gap repair protein TERM 4085 2993412 - 2993422 + g 72 -6.8 -4.21275 | overlap 2993394 2993393 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2994906 - 2994001 - | membrane-associated, 16S rRNA-binding GTPase TERM 4086 2994345 - 2994335 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC TERM 4087 2994814 - 2994825 + g 70 -5.8 -4.16284 | GGTAATGGAGATCTT CTGC CCCA GCAG TTTGTTCAACAATGT rnc 2995583 - 2994903 - | RNase III TERM 4088 2995842 - 2995810 - R 100 -21.5 -4.07877 | opp_overlap 2995798 TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGGCTATT lepB 2996830 - 2995856 - | leader peptidase (signal peptidase I) TERM 4089 2996392 - 2996408 + g 76 -9.5 -3.76373 | overlap 2996370 GTAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2998645 - 2996846 - | GTP-binding membrane protein TERM 4090 2996944 - 2996957 + g 74 -2.3 -5.07486 | overlap 2996942 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGGCTG TERM 4091 2998850 - 2998833 - R 93 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2999322 - 2998843 - | RseC protein involved in reduction of the SoxR iron-sulfur cluster rseB 3000275 - 2999319 - | anti-sigma factor TERM 4092 3000216 - 3000189 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 3000925 - 3000275 - | anti-sigma factor TERM 4093 3000651 - 3000663 + g 78 -7.7 -4.43189 | opp_overlap 3000659, overlap 3000659 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTCTGCCATTGAT rpoE 3001533 - 3000958 - | RNA polymerase, sigma 24 (sigma E) factor TERM 4094 3002088 - 3002108 + r 77 -8.9 -3.73775 | overlap 3002091 TCAACATTTTATGCC CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACTGAC TERM 4095 3003581 - 3003568 - R 74 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA yfiC 3004286 - 3003549 - | putative S-adenosyl-L-methionine-dependent methyltransferase TERM 4096 3003665 - 3003639 - G 88 -12.4 -3.58269 | overlap 3003663 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 4097 3004324 - 3004311 - H 74 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 4098 3004855 - 3004844 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT srmB 3004418 - 3005752 + | ATP-dependent RNA helicase TERM 4099 3005784 - 3005753 - f 93 -12.5 -3.44844 | overlap 3005747 ACGACAGAAGAGTAA TCTTAATTCCGGG TTTAAG CCCGGAATTAAAA GTGCTGGCAAACGCA TERM 4100 3006429 - 3006419 - g 82 -2.4 -5.40072 | overlap 3006420 TCTCCTGGAAAAAAA GCGC CAG GAGC TGGAGAAAAAACGAA ECUMN_2900 3005931 - 3006461 + | transposase ORF A, IS1397 TERM 4101 3006742 - 3006730 - g 73 -9.1 -3.6761 | overlap 3006728 GCGCCTGAAGAAATA CCGGT CTT ACCGG GGAAATATGGGACTC TERM 4102 3007284 - 3007229 - g 82 -3.2 -5.22104 | gap 1, opp_overlap 3007230, overlap 3007230 3007231 3007233 CAAAAAAGAATAAAA CTCAGTCTTGGGGGACTCAGCCCGGTA GAA TACCGGACTGAGTATCAAAAAGCCG-G TTAACTGAAACTGTC ECUMN_2901 3006566 - 3007288 + | transposase ORF B, IS3 family, IS150 group TERM 4103 3007368 - 3007393 + T 75 -5.3 -4.82901 | overlap 3007371 CTTCGTCGACAAGTT GGGTGCCGGGT TTAA GCCCGGCATTA TTTTTATCCCGGCAA TERM 4104 3007371 - 3007390 + T 100 -11.4 -4.52873 | overlap 3007368 CGTCGACAAGTTGGG TGCCGGGT TTAA GCCCGGCA TTATTTTTATCCCGG yfiE 3008278 - 3007397 - | putative DNA-binding transcriptional regulator TERM 4105 3007934 - 3007920 - G 70 -7.1 -4.0616 | GACTGCAACGATAAA CGCAC TTTTG GTGCG CGTTGCCGAAAACGC TERM 4106 3008080 - 3008090 + g 79 -2.4 -5.26875 | TGAGTTCATAGATGT GCGG CAG CAGC TTTTTTCCTTCGCGG TERM 4107 3008192 - 3008206 + g 70 -5 -4.57569 | overlap 3008195 AAAAGTCACCGTCGA TTGTGT GCA GCACAA TTTTTGCGAAGCTCG TERM 4108 3008227 - 3008207 - G 80 -11.3 -3.40403 | TTGTGTGCAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC TERM 4109 3008309 - 3008326 + H 83 -2.7 -5.52909 | opp_overlap 3008310, overlap 3008310 3008325 GAAAATATCGAATTT AGAATGT AAAA ACATTCA TTTTTTTAAATGTTA yfiK 3008381 - 3008968 + | neutral amino-acid efflux system TERM 4110 3008945 - 3008957 + T 73 -4.8 -4.70583 | CTGCTGCTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAATGAA TERM 4111 3008976 - 3008999 + T 100 -16.8 -3.22884 | opp_overlap 3008976, overlap 3008968 TCTATTAATGAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 4112 3008999 - 3008976 - T 100 -16.8 -4.90266 | opp_overlap 3008968 3008976 TCTATTAATGAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC yfiD 3009405 - 3009022 - | pyruvate formate lyase subunit TERM 4113 3009549 - 3009533 - H 80 -4.4 -5.24551 | TTAAATCAATAAAAA CCACAC ATCAA GTATGG TCGCAAATGGATTTT TERM 4114 3010172 - 3010189 + G 88 -5.5 -5.18726 | AGCCTGATTAACCAG CATCGCG AAGG CGTGGTG TTTTTGTTGTGGGGC ung 3009710 - 3010399 + | uracil-DNA-glycosylase TERM 4115 3010440 - 3010413 - T 100 -13.4 -3.5394 | opp_overlap 3010411 3010414 3010437 3010439, overlap 3010414 AAATTTGCGGGGAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 4116 3010439 - 3010414 - T 100 -16.9 -2.72043 | opp_overlap 3010411 3010414 3010437, overlap 3010413 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 4117 3010414 - 3010439 + T 89 -14.7 -3.0169 | opp_overlap 3010414 3010413, overlap 3010411 3010437 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT yfiF 3011484 - 3010447 - | putative methyltransferase ECUMN_2907 3011677 - 3011474 - | conserved hypothetical protein, putative Z3866 protein trxC 3011691 - 3012110 + | thioredoxin 2 TERM 4118 3012117 - 3012137 + F 100 -14.7 -4.50976 | TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 4119 3012212 - 3012237 + G 70 -3.9 -4.63218 | overlap 3012215 CTCCAGTTACGCGCC GAGCGTATTGC GCGC GCAACACGTCC TTTTCTTGCCCGCGG TERM 4120 3012392 - 3012376 - g 72 -10.1 -3.3782 | opp_overlap 3012375 3012373 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA yfiP 3012179 - 3012877 + | hypothetical protein TERM 4121 3013319 - 3013361 + G 70 -5.5 -4.42806 | overlap 3013304 3013315 CTGGCAAGGTCTGAA TGCCAGCTTTTCGCCTGTG CCGAT TAAACGCGGCAAGCTGGCG TTTATTTCGCAATCG yfiQ 3012909 - 3015569 + | fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit pssA 3015683 - 3017038 + | phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) TERM 4122 3017045 - 3017061 + F 93 -9.4 -5.04249 | opp_overlap 3017045 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 4123 3017061 - 3017045 - f 75 -9.4 -3.51032 | opp_overlap 3017045 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG yfiM 3017063 - 3017407 + | conserved hypothetical protein yfiM; putative exported protein kgtP 3018702 - 3017404 - | alpha-ketoglutarate transporter TERM 4124 3018975 - 3019008 + r 85 -10.9 -3.84406 | opp_overlap 3018987 CCGCAACTCTTCGTA GGTCGGGTAAGACGC GCCA GCGTCGCATCCGGCC TTCTTCTGCTCCAGC TERM 4125 3019031 - 3019050 + r 100 -13.6 -3.58914 | opp_overlap 3019031 GCTCCAGCGCAAAAA GGCCATCC TGAC GGATGGCC TTCTGCTTAATTTGA TERM 4126 3019050 - 3019031 - R 100 -13.6 -4.62069 | opp_overlap 3019031 GCTCCAGCGCAAAAA GGCCATCC TGAC GGATGGCC TTCTGCTTAATTTGA TERM 4127 3019196 - 3019217 + r 76 -8.7 -3.91196 | opp_overlap 3019188 GGCAAATTCTGTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4128 3020383 - 3020394 + r 71 -4.4 -4.7254 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTAATAAACAGT TERM 4129 3021685 - 3021697 + r 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4130 3022456 - 3022469 + r 74 -6.7 -4.41177 | overlap 3022421 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 4131 3024477 - 3024504 + r 82 -12.8 -2.77899 | opp_overlap 3024454 3024482, overlap 3024482 GTCTAATTTATAGAC AAAAACGAGCCC CGAA GGGCTCGTTTTA TCATTACTGGACGGC TERM 4132 3024482 - 3024499 + r 100 -12.7 -4.56607 | opp_overlap 3024454 3024482, overlap 3024477 ATTTATAGACAAAAA CGAGCCC CGAA GGGCTCG TTTTATCATTACTGG TERM 4133 3024499 - 3024482 - R 100 -12.7 -5.04597 | opp_overlap 3024482 3024477, overlap 3024454 ATTTATAGACAAAAA CGAGCCC CGAA GGGCTCG TTTTATCATTACTGG clpB 3027081 - 3024508 - | protein disaggregation chaperone TERM 4134 3026277 - 3026257 - G 72 -7.5 -3.86822 | opp_overlap 3026257 TAATTCGTCGATAAA CAGGATGAC GTT GCCTTCCTG TTTGGCAAGATCGTT yfiH 3027942 - 3027211 - | hypothetical protein rluD 3028919 - 3027939 - | 23S rRNA pseudouridine synthase TERM 4135 3028954 - 3028964 + H 72 -8.2 -3.8766 | ATCGTTGGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC TERM 4136 3029772 - 3029753 - g 70 -3.5 -4.66833 | overlap 3029756 3029763 3029764 3029766 GCGCAAGCTGAAAAA GTAGCGA AAATCA TCGCTGC AAACAGCAGCAATAC yfiO 3029054 - 3029791 + | putative lipoprotein TERM 4137 3029845 - 3029798 - f 82 -4.8 -5.28561 | opp_overlap 3029812, overlap 3029807 3029812 AATACATAACAAAAA CCTGAAACACAAAACGGCAGCC CTTG AGCTGCCGTTTTTTTATTCTGT TAGTTGTGAAACTGA TERM 4138 3029836 - 3029807 - f 85 -11.5 -3.47713 | opp_overlap 3029812, overlap 3029798 3029812 CAAAAACCTGAAACA CAAAACGGCAGCC CTTG AGCTGCCGTTTTT TTATTCTGTTAGTTG TERM 4139 3029831 - 3029812 - f 100 -11.4 -4.79451 | opp_overlap 3029812, overlap 3029807 3029798 ACCTGAAACACAAAA CGGCAGCC CTTG AGCTGCCG TTTTTTTATTCTGTT TERM 4140 3029812 - 3029831 + F 100 -10.7 -5.94214 | opp_overlap 3029807 3029798 3029812 ACCTGAAACACAAAA CGGCAGC CCTTGA GCTGCCG TTTTTTTATTCTGTT TERM 4141 3030356 - 3030323 - g 72 -6.7 -4.1822 | gap 1, overlap 3030324 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG yfiA 3030062 - 3030403 + | cold shock protein associated with 30S ribosomal subunit TERM 4142 3030429 - 3030444 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC TERM 4143 3030485 - 3030467 - f 72 -7.4 -4.13014 | TTGACAGCGTGAAAA CAGTACGG GTA CTGTACTG AAGTCACTTAAGGAA pheL 3030507 - 3030554 + | pheA gene leader peptide TERM 4144 3030603 - 3030623 + F 100 -11.8 -5.5112 | opp_overlap 3030603 GAAGACGAACAATAA GGCCTCCC AAATC GGGGGGCC TTTTTTATTGATAAC TERM 4145 3030623 - 3030603 - f 82 -10.3 -4.03167 | opp_overlap 3030603 GAAGACGAACAATAA GGCCTCCCA AAT CGGGGGGCC TTTTTTATTGATAAC pheA 3030653 - 3031813 + | fused chorismate mutase P ; prephenate dehydratase TERM 4146 3031849 - 3031820 - T 100 -12.9 -4.28361 | opp_overlap 3031818 3031817 3031814 3031821 3031842, overlap 3031821 3031841 CCAACCTGATGAAAA GGTGCCGGATGAT GTGA ATCACCCGGCACT GGATTATTAGTGGCG TERM 4147 3031821 - 3031848 + T 87 -14.2 -2.67428 | opp_overlap 3031821 3031820 3031841, overlap 3031818 3031817 3031814 3031842 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCACCCGGCAC TGGATTATTAGTGGC TERM 4148 3031848 - 3031821 - T 100 -16.4 -3.16534 | opp_overlap 3031818 3031817 3031814 3031821 3031842, overlap 3031820 3031841 CAACCTGATGAAAAG GTGCCGGATGAT GTGA ATCACCCGGCAC TGGATTATTAGTGGC tyrA 3032977 - 3031856 - | fused chorismate mutase T ; prephenate dehydrogenase TERM 4149 3032151 - 3032165 + g 71 -2.8 -4.77165 | GAGAGCGCCAGAAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGG aroF 3034058 - 3032988 - | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible yfiL 3034267 - 3034632 + | hypothetical protein yfiR 3034779 - 3035297 + | hypothetical protein TERM 4150 3035869 - 3035859 - g 83 -5.4 -5.055 | overlap 3035862 TGAAGCGTTAAAAAA CATC ACC GATG TCGTACATGATGTGC TERM 4151 3036028 - 3036012 - g 77 -6.5 -4.64766 | overlap 3036014 TTTACAGGCCAAAAA TGCGCAG CTT CTGCGTA CCGCGCTACATGACC yfiN 3035287 - 3036513 + | putative diguanylate cyclase yfiB 3036529 - 3037011 + | putative outer membrane lipoprotein TERM 4152 3037056 - 3037035 - T 100 -11.5 -5.51046 | opp_overlap 3037035 CAAACAGATAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 3037434 - 3037087 - | 50S ribosomal subunit protein L19 trmD 3038243 - 3037476 - | tRNA (guanine-1-)-methyltransferase TERM 4153 3037724 - 3037753 + g 73 -11.5 -2.55668 | opp_overlap 3037723 3037722, overlap 3037723 GGCAATCCAGCAATC CTTCAGCAAAGGA ATCT TCCGTTGCTGAGG CTTCATGTCCCAGTA rimM 3038822 - 3038274 - | 16S rRNA processing protein rpsP 3039089 - 3038841 - | 30S ribosomal subunit protein S16 TERM 4154 3039145 - 3039113 - R 90 -9.2 -4.63218 | gap 1, opp_overlap 3039116, overlap 3039116 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 4155 3039143 - 3039116 - R 95 -12 -4.43307 | opp_overlap 3039116, overlap 3039113 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 3040699 - 3039338 - | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) TERM 4156 3040960 - 3040946 - g 85 -2.7 -5.40072 | overlap 3040948 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC ypjD 3040791 - 3041657 + | conserved hypothetical protein; putative inner membrane protein yfjD 3041768 - 3042964 + | conserved hypothetical protein; putative inner membrane protein TERM 4157 3042968 - 3042999 + T 100 -13 -4.15044 | opp_overlap 3042971, overlap 3042971 GTGGCGGAGTAACGA AAACGGCCCTGCAT TCGC ATGCAGGGCCGTGA TTTATTACGAAAGCA TERM 4158 3042996 - 3042971 - T 100 -19.1 -4.45544 | opp_overlap 3042968 3042971 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGATTTATTACGAAA TERM 4159 3042971 - 3042996 + T 100 -19.1 -3.10244 | opp_overlap 3042971, overlap 3042968 GCGGAGTAACGAAAA CGGCCCTGCAT TCGC ATGCAGGGCCG TGATTTATTACGAAA grpE 3043612 - 3043019 - | heat shock protein yfjB 3043735 - 3044613 + | NAD kinase TERM 4160 3044704 - 3044694 - f 70 -5.4 -4.39166 | TTTCATACAGGAAAA CAAC TAT GTTG GCACAACTGACCATC recN 3044699 - 3046360 + | recombination and repair protein smpA 3046509 - 3046850 + | small membrane lipoprotein TERM 4161 3046870 - 3046909 + T 95 -12.4 -3.70444 | gap 1, opp_overlap 3046882, overlap 3046882 AAAGTTGCCCTCAAA GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC TGTTATTTATTCGCT TERM 4162 3046882 - 3046898 + T 100 -12.3 -5.46276 | opp_overlap 3046882, overlap 3046870 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT TERM 4163 3046898 - 3046882 - T 100 -12.3 -5.10077 | opp_overlap 3046870 3046882 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT yfjF 3047202 - 3046912 - | hypothetical protein TERM 4164 3047028 - 3047046 + g 74 -3 -4.96773 | overlap 3047030 CGCTGAGTTTTGCCG GACGGC TGTAAAT GCCGAC TTTGTTTTTAGTTAA yfjG 3047668 - 3047192 - | hypothetical protein TERM 4165 3048191 - 3048179 - g 70 -5.5 -4.35524 | GGTGCAAAGTGAAAA TCGGC GTC GCCAA AGGTAAGAAACAGCA smpB 3047800 - 3048282 + | trans-translation protein TERM 4166 3048596 - 3048581 - f 74 -3.2 -5.08011 | overlap 3048583 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 4167 3048921 - 3048896 - f 86 -7.6 -5.10029 | opp_overlap 3048896 ATGAACCTTAAAAAA GCCTGTAACT TCAACG AGTTGCAGGC TTTTTTGTTGCATGT TERM 4168 3048896 - 3048921 + F 100 -10.5 -5.49234 | opp_overlap 3048896 ATGAACCTTAAAAAA GCCTGTAACTT CAAC GAGTTGCAGGC TTTTTTGTTGCATGT TERM 4169 3049988 - 3049965 - g 77 -10.2 -3.58343 | CCCAGCATCCGCAAA CCGCTGGAGC ACAT GCACCAGCAG ACCGCGAACGCCGCG ECUMN_2945 3049026 - 3050273 + | Prophage CP4-57 integrase TERM 4170 3050310 - 3050353 + F 74 -11 -2.83747 | gap 1, overlap 3050313 3050314 GAATCTGTTTGAACG GGAATGCGATATGCCGCTGCT GGA AGC-GCGGCATCTCGCCCTTC TGCTTCTCGGCCTTG TERM 4171 3050313 - 3050350 + F 73 -9.1 -3.56325 | gap 1, overlap 3050310 3050314 TCTGTTTGAACGGGA ATGCGATATGCCGCTGCT GGA AGC-GCGGCATCTCGCCC TTCTGCTTCTCGGCC TERM 4172 3050314 - 3050349 + F 82 -12.6 -2.73474 | gap 1, overlap 3050313 3050310 CTGTTTGAACGGGAA TGCGATATGCCGCTGCT GGA AGC-GCGGCATCTCGCC CTTCTGCTTCTCGGC ECUMN_2946 3050320 - 3050919 + | Conserved hypothetical protein from bacteriophage origin; putative exported protein TERM 4173 3051128 - 3051150 + T 100 -13.4 -4.2828 | opp_overlap 3051122 3051119 GATCAATCACCTACT CTGCTCTGGC AGA GCCAGAGCCG TTTTACTGACTAAAG ECUMN_2947 3052441 - 3051269 - | conserved hypothetical protein frm bacteriophage origin TERM 4174 3051798 - 3051787 - G 72 -4.4 -4.60041 | opp_overlap 3051787 AGTCATTTGTAAAAA TACC TAAA GGTA TTTCAGTGTCTTCAT ECUMN_2948 3052815 - 3053432 + | conserved hypothetical protein from bacteriophage origin TERM 4175 3053466 - 3053476 + GF 75 -4.6 -4.76041 | GCATTCCAAATTTTT GGCG GAG TGCC TTTTTAGTAACTATA ECUMN_2949 3053407 - 3054033 + | hypothetical protein from bacteriophage origin; putative DNA ligase fragment TERM 4176 3054046 - 3054059 + F 74 -5.9 -4.60797 | opp_overlap 3054042 3054043 3054046 TAGAATTAACACCAA GGCTG TGCC CGGCC TTTTATCTATGCAAC ECUMN_2951 3054619 - 3056688 + | conserved hypothetical protein from bacteriophage origin TERM 4177 3056808 - 3056837 + F 73 -6.5 -4.44245 | opp_overlap 3056808 AAAAAGTGGTACAGA GTGGGACAG CCGTTGCTGAAT CTGTCCCAC TTTTCTGACTGGTAT TERM 4178 3057496 - 3057476 - g 100 -4.7 -6.02914 | opp_overlap 3057476 3057477, overlap 3057477 GGTATAGAAAAAAAA TTTCAGCCA AGT TAGCTGAAC TTCTGAATGGCGAGT TERM 4179 3057495 - 3057477 - g 78 -8.2 -4.20122 | opp_overlap 3057476 3057477, overlap 3057476 GTATAGAAAAAAAAT TTCAGCCA AGT TAGCTGAA CTTCTGAATGGCGAG ECUMN_2952 3057361 - 3058347 + | conserved hypothetical protein from bacteriophage origin; putative hydrolase (metallo-beta-lactamase superfamily) TERM 4180 3058934 - 3058960 + G 77 -6 -4.64766 | opp_overlap 3058936 3058938, overlap 3058936 TCAGAAATATTACAT GATATTGATTTC AAA GAAATTAATAAC TTTTTCGGCTGTGAA TERM 4181 3059317 - 3059337 + G 72 -9.9 -3.41359 | overlap 3059316 TTATTCCACTAGCAT TGATGATAA TAA TTATCATCA TATTCATTTTAAACA ECUMN_2953 3058340 - 3059563 + | hypothetical protein from bacteriophage origin ECUMN_2954 3059590 - 3059805 + | hypothetical protein from bacteriophage origin ECUMN_2955 3059798 - 3061000 + | hypothetical protein from bacteriophage origin; putative ERCC4-like helicases; putative Superfamily II helicase ECUMN_2956 3061039 - 3062322 + | hypothetical protein from bacteriophage origin; putative Signal transduction histidine kinase, putative Superfamily II helicase TERM 4182 3062336 - 3062302 - T 95 -12.4 -3.61983 | opp_overlap 3062292 3062298, overlap 3062303 GTAATTGATAGAGAA CTATCATGGTTGAATT TAT AATTCAGCCATGATAA ATAATAATTTGAAAG TERM 4183 3062335 - 3062303 - T 86 -13.7 -2.76708 | opp_overlap 3062292 3062298, overlap 3062302 TAATTGATAGAGAAC TATCATGGTTGAATT TAT AATTCAGCCATGATA AATAATAATTTGAAA TERM 4184 3062384 - 3062351 - T 91 -11.3 -3.73725 | opp_overlap 3062351 3062357, overlap 3062357 AATAATAATTTGAAA GATAAATAGGTTGTA ATGA TATAACCTATTTATC TTCTCGTTACATGAA TERM 4185 3062351 - 3062384 + T 100 -13.5 -3.52652 | opp_overlap 3062351 3062357, overlap 3062357 AATAATAATTTGAAA GATAAATAGGTTGTA ATGA TATAACCTATTTATC TTCTCGTTACATGAA TERM 4186 3062357 - 3062378 + T 74 -6.7 -4.30911 | opp_overlap 3062357 3062351, overlap 3062351 AATTTGAAAGATAAA TAGGTTGTA ATGA TATAACCTA TTTATCTTCTCGTTA ECUMN_2957 3062956 - 3062477 - | conserved hypothetical protein from bacetriophage origin; putative transcriptional regulator TERM 4187 3063329 - 3063343 + G 70 -5.6 -4.329 | overlap 3063330 CTTATGTGGACAGTC AGCCTC GCT GAGGCG TTTATTCATGTATTC ECUMN_2958 3063317 - 3063838 + | Glucitol/sorbitol permease IIC component from bacteriophage origin ECUMN_2959 3063988 - 3064209 + | Glucitol/sorbitol-specific phosphotransferase enzyme IIA component from bacteriophage origin srlE 3064206 - 3065186 + | Glucitol/sorbitol-specific phosphotransferase enzyme IIB component from bacteriophage origin TERM 4188 3065624 - 3065614 - g 74 -8.2 -3.92522 | GCCGAACTGGAGAAA CCGG AGA CCGG GCGGATCCTGCGCGG ECUMN_2961 3065197 - 3066210 + | putative dehydrogenase from bacteriophage origin TERM 4189 3066216 - 3066241 + F 70 -9 -3.18796 | gap 1, opp_overlap 3066216 3066217 AGATGTTTAAACAAA C-GGCGCAGGG TAGCT CCCTGTGCCAG TTCCATATGATTTTG TERM 4190 3066240 - 3066216 - f 85 -9.2 -4.43208 | opp_overlap 3066216, overlap 3066217 AGATGTTTAAACAAA CGGCGCAGGG TAGCT CCCTGTGCCA GTTCCATATGATTTT TERM 4191 3066239 - 3066217 - f 74 -10.5 -3.25202 | opp_overlap 3066216, overlap 3066216 GATGTTTAAACAAAC GGCGCAGGG TAGCT CCCTGTGCC AGTTCCATATGATTT ECUMN_2962 3066453 - 3067706 + | conserved hypothetical protein from bacteriophage origin; putative hexulose 6 phosphate synthase ECUMN_2963 3068413 - 3067778 - | putative 3-hexulose-6-phosphate synthase from bacteriophage origin ECUMN_2964 3069003 - 3068437 - | putative 3-hexulose-6-phosphate isomerase (PHI) from bacteriophage origin TERM 4192 3068894 - 3068880 - G 70 -5 -4.56597 | GCCCTGCGCCAAAAA CAAACA CCG TGTTCG CTTCAGCGATGGCCT ECUMN_2965 3069842 - 3069000 - | putative Glucose-6-phosphate isomerase from bacteriophage origin ptsG 3071365 - 3069839 - | PTS system glucose-specific EIIABC component from bacteriophage origin TERM 4193 3071104 - 3071073 - G 85 -8.6 -4.58466 | overlap 3071075 TTCATAATCAGAAAA CCGGCGATCGCCGA CAAC CCGGCAATCCCCTG ATCGTCACTCAGTCC TERM 4194 3071484 - 3071512 + H 77 -9 -3.86015 | opp_overlap 3071477 3071476 3071482 3071485, overlap 3071485 CCGACAACGAAAGTT ATTTCCGGTTTT CGCTT AAAACCGGAAAA TTTATGAGGACAATC TERM 4195 3071485 - 3071511 + H 82 -12.5 -2.91395 | opp_overlap 3071477 3071476 3071482 3071485, overlap 3071484 CGACAACGAAAGTTA TTTCCGGTTTT CGCTT AAAACCGGAAA ATTTATGAGGACAAT TERM 4196 3071511 - 3071485 - H 82 -12.5 -2.72436 | opp_overlap 3071485 3071484, overlap 3071477 3071476 3071482 CGACAACGAAAGTTA TTTCCGGTTTT CGCTT AAAACCGGAAA ATTTATGAGGACAAT ECUMN_2967 3071573 - 3073267 + | putative dipeptide/oligopeptide/nickel ABC-type transport systems, periplasmic component from bacteriophage origin TERM 4197 3073475 - 3073487 + T 70 -5.5 -4.37658 | opp_overlap 3073466, overlap 3073476 3073484 3073485 AAGATATCTGCACGA TCCAG ATC CTGGG TTTTGTAGGCCCGTT ECUMN_2968 3074158 - 3073619 - | putative Bifunctional deaminase-reductase, C-terminal from bacteriophage origin ECUMN_2969 3074332 - 3075402 + | conserved hypothetical protein from bacteriophage origin ECUMN_2970 3075698 - 3075474 - | hypothetical protein from bacteriophage origin TERM 4198 3075724 - 3075699 - R 70 -10.5 -2.50016 | opp_overlap 3075693, overlap 3075698 3075696 TCGCATTACTAACAT TGCTGCGTGTT AATC AACAGGCAGCA GGTCACTCTTATTTT ECUMN_2971 3076830 - 3075733 - | conserved hypothetical protein from bactreriophage origin; putative CBS domain TERM 4199 3076106 - 3076085 - G 77 -2.9 -5.16132 | overlap 3076086 GATAGTAAAAGAAAA GGTTCTGAC AACT GTCTGAACT GAGAACTAAGATCGG ECUMN_2972 3077864 - 3077184 - | site-specific recombinase, phage integrase family TERM 4200 3077783 - 3077823 + g 100 -19.3 -3.45054 | opp_overlap 3077794, overlap 3077784 3077794 TCCACGGTGACGTGT TCATACTCAAATCTCCTGC AAT GTGGGAGATTTGAGTATGG TTGTCCCTTATGAGC TERM 4201 3077784 - 3077822 + g 100 -20.6 -2.66711 | opp_overlap 3077794, overlap 3077783 3077794 CCACGGTGACGTGTT CATACTCAAATCTCCTGC AAT GTGGGAGATTTGAGTATG GTTGTCCCTTATGAG ECUMN_2973 3078096 - 3078722 + | hypothetical protein from bacteriophage origin ECUMN_2974 3078747 - 3079022 + | hypothetical protein from bacteriophage origin TERM 4202 3079171 - 3079125 - T 71 -9.4 -3.05268 | overlap 3079128 TAAGCATTGTGAAGA GAACGGGGCAATGAAAAAAAGC CGA GCTGTATTTCGTAGCCCCATCC CCTGACCAATATTTT ECUMN_2975 3079693 - 3079355 - | hypothetical protein from bacteriophage origin TERM 4203 3080154 - 3080141 - R 71 -8.1 -3.75832 | AAAAGGATACGCAAA GGAGC CGCG GCTCC TGGTGATATGAAAGC TERM 4204 3080183 - 3080168 - R 80 -10.4 -3.83026 | opp_overlap 3080168 CCTGGTGATATGAAA GCCCAC AGAT GTGGGC TTTTTCGTTGATGGT TERM 4205 3080168 - 3080183 + r 93 -10.4 -4.90869 | opp_overlap 3080168 CCTGGTGATATGAAA GCCCAC AGAT GTGGGC TTTTTCGTTGATGGT ypjA 3084901 - 3080198 - | adhesin-like autotransporter TERM 4206 3081148 - 3081169 + g 70 -6.5 -4.26622 | overlap 3081149 3081160 3081161 GCGTTGGAGCGGGAG TCGGGTCTG GTTT CGGATCCGG TTTTGGGTCTGGTTT TERM 4207 3081810 - 3081794 - G 81 -12.3 -3.14132 | CCGTGGCGTCATTAA CGACAGG CTT CCTGTCG CGCCACTGACCGATG TERM 4208 3081964 - 3081974 + g 72 -6.8 -4.27316 | CCTTTGTGGCGAAGT CCTG ACC CAGG TTTTGCATTGCCCCA TERM 4209 3084135 - 3084153 + g 100 -13.2 -4.1337 | TATACTCTTTGCTCA CCGCCATT TTT AATGGCGG TTGTTTCTACTGTGC TERM 4210 3085536 - 3085559 + r 100 -11 -5.34309 | opp_overlap 3085536 CACAGCGCAGATCAA GGGGTTACGT GAAA GCGTAGCCCC TTTTTCTTTGGTAGT ECUMN_2978 3087160 - 3085706 - | conserved hypothetical protein from bacteriophage origin TERM 4211 3086867 - 3086881 + g 75 -5 -4.76478 | opp_overlap 3086867, overlap 3086862 TTGATTATTATCAAA GTGTAC GTT GTATAC TTTTAATTTATTTTC ECUMN_2979 3087657 - 3087481 - | hypothetical protein insH 3087517 - 3088533 + | IS5 transposase and trans-activator; CP4-44 prophage TERM 4212 3088902 - 3088923 + Tr 100 -11.6 -5.03715 | opp_overlap 3088901 3088900 CACATGTAAGCAATT TGCCCGCT TGGCAT AGCGGGCA TTTTTTCCAGGTACT ECUMN_2981 3089209 - 3089012 - | hypothetical protein TERM 4213 3089375 - 3089361 - H 72 -7.2 -4.08689 | opp_overlap 3089360 3089361 CAGTCAACAAGCAAA TGCTAA TAC TTAGCA CTATTTATAGTTACC TERM 4214 3091944 - 3091956 + G 72 -6.9 -4.17048 | AATATCAATATTCCT GGGCG CAG CGCTC TTCTTTTAGGGAAAA ECUMN_2982 3089751 - 3092003 + | putative Alpha-amylase TERM 4215 3092009 - 3092046 + F 70 -7 -4.10552 | opp_overlap 3092009, overlap 3092012 3092013 3092014 3092016 CTATTTGTAATTTAA TGTTATATCTGCCCCG CTAAAA CGGGGCAGATAATATG TTTAGTTTACTAACG TERM 4216 3092012 - 3092044 + F 87 -11.5 -3.64541 | gap 1, opp_overlap 3092009, overlap 3092009 3092013 3092014 3092016 TTTGTAATTTAATGT TA-TATCTGCCCCG CTAAAA CGGGGCAGATAATA TGTTTAGTTTACTAA TERM 4217 3092013 - 3092042 + F 85 -12.2 -3.39117 | opp_overlap 3092009, overlap 3092012 3092009 3092014 3092016 TTGTAATTTAATGTT ATATCTGCCCCG CTAAAA CGGGGCAGATAA TATGTTTAGTTTACT TERM 4218 3092014 - 3092041 + F 93 -15.7 -2.62386 | opp_overlap 3092009, overlap 3092013 3092012 3092009 3092016 TGTAATTTAATGTTA TATCTGCCCCG CTAAAA CGGGGCAGATA ATATGTTTAGTTTAC TERM 4219 3092016 - 3092039 + F 87 -13.9 -2.83953 | opp_overlap 3092009, overlap 3092014 3092013 3092012 3092009 TAATTTAATGTTATA TCTGCCCCG CTAAAA CGGGGCAGA TAATATGTTTAGTTT TERM 4220 3092071 - 3092088 + F 82 -4.9 -5.24129 | CTAACGGTCATTTTG CAGTGAA GCCA TTTACTG TTTTTTATCGACCAG TERM 4221 3092960 - 3092977 + G 71 -9.1 -3.53012 | TTCCGCCATCCACTG GCGCGTC GCCC GATGCGC TTTGCCGCGCCGCCG ygaT 3092339 - 3093316 + | hypothetical protein TERM 4222 3093725 - 3093744 + G 73 -4.2 -4.85599 | opp_overlap 3093725 AGAGCGCGAACCGAA TATCACCG GGCT CGGCGGTA TTTTTGTGCCGTCCA TERM 4223 3093965 - 3093983 + G 86 -9.5 -4.38927 | opp_overlap 3093964 3093965, overlap 3093966 CCGGCTGGTGAAAAT GCTCGGC CTCGA GCCGGGC TTTATTATCTGCCCG ygaF 3093336 - 3094604 + | putative enzyme gabD 3094627 - 3096075 + | succinate-semialdehyde dehydrogenase I, NADP-dependent gabT 3096089 - 3097369 + | 4-aminobutyrate aminotransferase, PLP-dependent gabP 3097680 - 3099080 + | gamma-aminobutyrate transporter TERM 4224 3099306 - 3099329 + G 70 -6.8 -4.07568 | gap 1, overlap 3099308 ATCGGGTGGCGTCTA TGTCAGAGCAG GAG CTGCTC-GATA TTTTCGACGCCCGCG TERM 4225 3099671 - 3099696 + G 73 -11.8 -2.56596 | opp_overlap 3099654, overlap 3099667 CTGACAGCGGCGGTA CTGGCGCGAG ATACCG CGCGCGCCAG TGAGTTAATGCGCCA csiR 3099101 - 3099763 + | DNA-binding transcriptional dual regulator ygaU 3100213 - 3099764 - | hypothetical protein TERM 4226 3099791 - 3099813 + g 77 -8.4 -4.1196 | overlap 3099788 3099792 3099808 AATACGCAACACTTG CCCCGGGTAA ATT TTATCCGGGC TTTTGAGCATCGGTT TERM 4227 3099792 - 3099812 + g 75 -11.9 -3.06694 | overlap 3099788 3099791 3099808 ATACGCAACACTTGC CCCGGGTAA ATT TTATCCGGG CTTTTGAGCATCGGT TERM 4228 3099829 - 3099843 + g 71 -2.8 -4.77567 | overlap 3099831 TTTTGAGCATCGGTT TATTCG CTT CGAAGA TTTTATTGTACAGAT TERM 4229 3100281 - 3100262 - R 90 -12.8 -3.29649 | AGTGTAGCAGAGGAA CGCGGCGC GTTA ACGCCGCG GGGGTGAGGACAGGT yqaE 3100455 - 3100297 - | hypothetical protein TERM 4230 3100506 - 3100494 - H 76 -6.3 -4.58395 | CTCATTGTTTAAAAA GAGAT TTT ATCTC TTAAGCGTAGTAATT ygaV 3100638 - 3100937 + | putative DNA-binding transcriptional regulator ygaP 3100947 - 3101471 + | conserved hypothetical protein; putative inner membrane protein with hydrolase activity TERM 4231 3101514 - 3101475 - T 71 -9.2 -3.32268 | gap 1, opp_overlap 3101476, overlap 3101466 3101476 3101479 CAACGAGCTTGAGAA GCGACGCCGGACG-CGCCA TAG CGGCGGCATCCGGCCTCAG TAATTAGATCAGGAA TERM 4232 3101513 - 3101476 - T 81 -12.7 -2.59039 | gap 1, opp_overlap 3101476, overlap 3101475 3101479 AACGAGCTTGAGAAG CGACGCCGGACG-CGCCA TAG CGGCGGCATCCGGCCTCA GTAATTAGATCAGGA TERM 4233 3101510 - 3101479 - T 74 -10.8 -2.59748 | gap 1, opp_overlap 3101476, overlap 3101476 3101475 GAGCTTGAGAAGCGA CGCCGGACG-CGCCA TAG CGGCGGCATCCGGCC TCAGTAATTAGATCA stpA 3101922 - 3101518 - | DNA binding protein, nucleoid-associated TERM 4234 3101638 - 3101655 + g 83 -6.2 -5.00616 | overlap 3101637 AGTGAATTTATATTT CGCCGG ACGCGG CTGGCG TTTTTTACCAGCGCG ygaW 3102590 - 3103039 + | conserved hypothetical protein; putative inner membrane protein TERM 4235 3103048 - 3103074 + T 89 -12.2 -3.68619 | overlap 3103050 AGCCTGACCCTTCTT TTCGCGACTGGC ATC GCCAGTCGCGTC TTTAACTGGCTTCGC TERM 4236 3103050 - 3103072 + T 100 -19.2 -3.42283 | overlap 3103048 CCTGACCCTTCTTTT CGCGACTGGC ATC GCCAGTCGCG TCTTTAACTGGCTTC ygaC 3103420 - 3103076 - | hypothetical protein TERM 4237 3103242 - 3103252 + g 70 -5.4 -4.43681 | overlap 3103228 3103225 GGTTCAGCCAGTGTT GAAC TAC GTTC TTTTAATGTTGGATG ygaM 3103560 - 3103901 + | hypothetical protein TERM 4238 3103933 - 3103953 + T 100 -16.9 -5.15969 | opp_overlap 3103923 AATACGCGTCTTTGA CCCCGAAGC CTG GCTTCGGGG TTTTTTAGCTTAAGG ECUMN_2997 3105292 - 3103958 - | putative fused protein: aminotransaminase/transcriptional regulator, GntR family ECUMN_2998 3105380 - 3105811 + | hypothetical protein nrdH 3106020 - 3106265 + | glutaredoxin-like protein nrdI 3106262 - 3106663 + | protein that stimulates ribonucleotide reduction TERM 4239 3107167 - 3107177 + G 79 -2.4 -5.17353 | CAGCAGCGCGGCGAA CTGG TTT CCTG TTTTTTGCTGCGTAT TERM 4240 3107939 - 3107965 + G 90 -14.4 -2.72263 | overlap 3107939 ATTCCCCCGACTTTG CCCGCACGGTAG AGA CTGCCGTGCGCG GTTTAACGGCGGTGT TERM 4241 3107939 - 3107966 + G 95 -14.2 -3.54129 | gap 1, overlap 3107939 ATTCCCCCGACTTTG CC-CGCACGGTAG AGA CTGCCGTGCGCGG TTTAACGGCGGTGTC nrdE 3106645 - 3108789 + | ribonucleoside-diphosphate reductase 2, alpha subunit TERM 4242 3109196 - 3109182 - g 70 -3.5 -4.67982 | gap 1, overlap 3109183 3109184 CTGGAGTGAAGAAAA CGC-GC CGTT GCAGCG AAAAGCTCAGATTAT TERM 4243 3109436 - 3109415 - g 72 -4.3 -4.59207 | ATAAATATCAGAAAA GCCAGGAAA AGAT CTCCCAGGC ACAACGTGAAGAGTT nrdF 3108799 - 3109758 + | ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like TERM 4244 3109874 - 3109898 + F 100 -7.2 -5.62219 | CTCTGTTGCATTATT CGCCTGAA ACCACAATA TTCAGGCG TTTTTTTGCTATCTT proV 3110115 - 3111317 + | glycine betaine transporter subunit ; ATP-binding compoent of ABC superfamily proW 3111310 - 3112374 + | glycine betaine transporter subunit ; membrane component of ABC superfamily proX 3112431 - 3113423 + | glycine betaine transporter subunit ; periplasmic-binding component of ABC superfamily ECUMN_3006 3113876 - 3115060 + | putative transport protein (ousB-like) ygaZ 3115184 - 3115921 + | putative transporter TERM 4245 3116148 - 3116158 + G 70 -6.8 -4.03234 | GTCGGCTTCGCGGTA CTGG GTG CCAG TTTCTATAAAACACG ygaH 3115911 - 3116246 + | conserved hypothetical protein; putative inner membrane protein mprA 3116337 - 3116867 + | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux TERM 4246 3116915 - 3116938 + F 100 -12.5 -4.56597 | opp_overlap 3116914 3116913 3116911 3116931 AAAGAAAAAATGACT GGCCAGCAT CGCAAC ATGCTGGCC TTTTTGGCAAGCAGG TERM 4247 3117405 - 3117394 - g 86 -5.8 -5.03314 | TTGAGGTGCAAAAAA TCGC CCTC GCGA AAGCACAAAGCGACT emrA 3116994 - 3118166 + | multidrug efflux system emrB 3118183 - 3119721 + | multidrug efflux system protein TERM 4248 3119732 - 3119751 + T 100 -12.2 -5.1848 | opp_overlap 3119728 3119732 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT TERM 4249 3119751 - 3119732 - T 88 -12.2 -3.50422 | opp_overlap 3119732, overlap 3119728 ACTAAGTACAACTAA GCCAGTTC ATTT GAACTGGC TTTTTTCAATTAATT luxS 3120300 - 3119785 - | S-ribosylhomocysteinase TERM 4250 3120419 - 3120436 + r 100 -11.3 -5.58522 | CAGAGATGAAATTTT GGCCACT CACG AGTGGCC TTTTTCTTTTCTGTC gshA 3122006 - 3120450 - | gamma-glutamate-cysteine ligase yqaA 3122507 - 3122079 - | conserved hypothetical protein; putative inner membrane protein yqaB 3123070 - 3122504 - | putative hydrolase TERM 4251 3123261 - 3123276 + r 71 -9 -3.28924 | overlap 3123249 GTTCGCCCTTCAGGC CGTTGC TGGC GCAACG TTATCCACCCAGGTG TERM 4252 3123293 - 3123310 + r 71 -9.9 -3.12432 | overlap 3123285 3123281 3123291 3123289 TATCCACCCAGGTGC TGGTGGT TATT ACCACCA TCTCTTCCATACTTT TERM 4253 3123519 - 3123537 + r 72 -9.5 -3.14211 | overlap 3123536 GGATTACTCGCCTTG CGGCTCG CCCTT CGGGCCG TTGCTAAAGCAACGT TERM 4254 3123536 - 3123551 + r 73 -9 -3.54743 | overlap 3123519 GCTCGCCCTTCGGGC CGTTGC TAAA GCAACG TTATCCTTCCTGGTG TERM 4255 3123793 - 3123811 + r 72 -9.5 -3.14211 | overlap 3123810 GGATTACTCGCCTTG CGGCTCG CCCTT CGGGCCG TTGCTAAAGCAACGT TERM 4256 3123810 - 3123825 + r 73 -9 -3.42996 | overlap 3123793 GCTCGCCCTTCGGGC CGTTGC TAAA GCAACG TTATCCTCCCTGGTG TERM 4257 3124069 - 3124087 + r 72 -9.5 -3.14211 | overlap 3124086 GGATTACTCGCCTTG CGGCTCG CCCTT CGGGCCG TTGCTAAAGCAACGT TERM 4258 3124086 - 3124101 + r 73 -9 -3.42996 | overlap 3124069 GCTCGCCCTTCGGGC CGTTGC TAAA GCAACG TTATCCTCCCTGGTG csrA 3124847 - 3124662 - | pleiotropic regulatory protein for carbon source metabolism alaS 3127712 - 3125082 - | alanyl-tRNA synthetase recX 3128340 - 3127840 - | regulatory protein for RecA TERM 4259 3128394 - 3128365 - R 95 -8.5 -5.1925 | opp_overlap 3128371, overlap 3128366 3128371 TTACAACTTAAAAAA GCAAAAGGGCCGC AGAT GCGACCCTTGTGT ATCAAACAAGACGAT TERM 4260 3128393 - 3128366 - R 89 -12 -3.70465 | opp_overlap 3128371, overlap 3128365 3128371 TACAACTTAAAAAAG CAAAAGGGCCGC AGAT GCGACCCTTGTG TATCAAACAAGACGA TERM 4261 3128371 - 3128388 + r 72 -8.3 -3.58726 | opp_overlap 3128371 3128366 3128365 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA TERM 4262 3128388 - 3128371 - R 91 -10.5 -4.86862 | opp_overlap 3128371, overlap 3128366 3128365 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA recA 3129470 - 3128409 - | DNA strand exchange and recombination protein with protease and nuclease activity TERM 4263 3129211 - 3129250 + g 77 -8.6 -4.08064 | gap 1, opp_overlap 3129195, overlap 3129212 GCACAGGTTTTACCT TCACGCTG-CGCTGCGG CGATCAC CTGCAACGTCAGCGTGG TTTTACCGGAAGATT ygaD 3130047 - 3129550 - | hypothetical protein TERM 4264 3130192 - 3130148 - R 91 -7.2 -5.28778 | gap 1, opp_overlap 3130149 3130153, overlap 3130149 AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCTCCCCTCTTGCAAAT-AGT TACTGCACGCGCGCC TERM 4265 3130191 - 3130149 - R 85 -10.7 -3.76182 | gap 1, opp_overlap 3130149 3130153, overlap 3130148 GGATTCAGAAAAAAG CTGATTAGCCAGAGGGAAGC TCAC GCTCCCCTCTTGCAAAT-AG TTACTGCACGCGCGC TERM 4266 3130153 - 3130188 + r 71 -10.4 -2.77899 | opp_overlap 3130149 3130148, overlap 3130149 TCAGAAAAAAGCTGA TTAGCCAGAGGGAAGC TCAC GCTCCCCTCTTGCAAA TAGTTACTGCACGCG mltB 3131277 - 3130192 - | membrane-bound lytic murein transglycosylase B TERM 4267 3131747 - 3131760 + G 82 -8.1 -4.45771 | overlap 3131755 GTTACCTGCTGCTAC CGTGC ATTG GCACG TTTGTCTTTTGCAAT srlA 3131533 - 3132096 + | glucitol/sorbitol-specific enzyme IIC component of PTS TERM 4268 3132459 - 3132440 - g 79 -3.6 -5.093 | overlap 3132443 CGTAAAAGAAGAAAA CATCAC TGTAGTGG GTGATG CGACACCACAACCCT srlE 3132093 - 3133052 + | glucitol/sorbitol-specific enzyme IIB component of PTS srlB 3133063 - 3133434 + | glucitol/sorbitol-specific enzyme IIA component of PTS srlD 3133438 - 3134217 + | sorbitol-6-phosphate dehydrogenase TERM 4269 3134249 - 3134222 - f 83 -12.1 -3.14564 | gap 1, overlap 3134224 3134242 TGATGTTCTGATTAA CAGCGGAGATCC GTTAA GGATCTCCGC-G AGACTAATAAAATGC TERM 4270 3134248 - 3134224 - f 100 -15.8 -3.13522 | overlap 3134222 3134242 ATGTTCTGATTAACA GCGGAGATCC GTTAA GGATCTCCGC GAGACTAATAAAATG TERM 4271 3134288 - 3134262 - f 100 -15.2 -4.75472 | GCGAGACTAATAAAA TGCCTGATGCGC TAC GCTCATCAGGCA TACAGGACTTCCGCC gutM 3134323 - 3134682 + | DNA-binding transcriptional activator of glucitol operon TERM 4272 3135443 - 3135419 - g 78 -10.8 -3.55444 | opp_overlap 3135441 TTTGCAGTCTTGAAA GCGTCGATAA GCTAA TTACCGACGC AGGTATCGATCCAGC srlR 3134749 - 3135522 + | DNA-bindng transcriptional repressor TERM 4273 3135713 - 3135726 + G 100 -3.7 -5.64274 | overlap 3135714 GCAACACTTGCCAGT ACCGG CACA CCGGC TTTTTTTGTCCATCC gutQ 3135515 - 3136480 + | putative phosphosugar-binding protein norR 3137991 - 3136477 - | DNA-binding transcriptional activator TERM 4274 3138277 - 3138263 - g 90 -7.8 -4.76963 | overlap 3138264 GCACAGAATATAAAA CGCTGC GCG GCAGCA GCTACAACAGCTACC TERM 4275 3138276 - 3138264 - g 71 -9.1 -3.45093 | overlap 3138263 CACAGAATATAAAAC GCTGC GCG GCAGC AGCTACAACAGCTAC norV 3138178 - 3139617 + | flavorubredoxin oxidoreductase TERM 4276 3139789 - 3139810 + G 77 -12.3 -2.72043 | overlap 3139788 AACGTGCCGATGACC TTACCCGCC AGAC GGCGGGTGA ATTTGCCGAGCAGTT TERM 4277 3139922 - 3139946 + G 81 -10 -3.86015 | opp_overlap 3139916 GCAATACGACAAGCT GGTGCTGGCA ACTGG TGCCAGTGCC TTTGTCCCGCCAGTG norW 3139614 - 3140747 + | NADH:flavorubredoxin oxidoreductase TERM 4278 3140772 - 3140794 + T 71 -4.7 -4.68506 | overlap 3140748 TCTCCCTCGCCCAAA GGGCGAGGG GACTG TCCGCGCTC TTTTTACGCTTAGTT hypF 3143137 - 3140825 - | carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases TERM 4279 3141412 - 3141398 - G 90 -11.4 -3.86346 | CCACTCCGGCACAAA GCGCAG GCA CTGCGC CAGCAGGTTACGCCA TERM 4280 3143044 - 3143054 + g 77 -3.2 -5.09426 | opp_overlap 3143031 TACGCAGTTGGACAC CGCA AGA TGTG TTTTTTGCCATTGAG hydN 3143745 - 3143218 - | formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit TERM 4281 3143881 - 3143851 - R 86 -7.7 -4.77157 | gap 1, opp_overlap 3143854 3143875, overlap 3143852 3143854 GTAATGCAGGAAAAA CGATGTCATCGACA CTAG TGACGATGACAT-G TGATGACAATGTTTA TERM 4282 3143854 - 3143879 + r 71 -10.5 -2.79679 | opp_overlap 3143851 3143852 3143854, overlap 3143875 ATGCAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT TERM 4283 3143879 - 3143854 - R 76 -10.5 -3.28873 | opp_overlap 3143854 3143875, overlap 3143851 3143852 ATGCAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT ascG 3144907 - 3143894 - | DNA-binding transcriptional repressor TERM 4284 3145712 - 3145735 + G 75 -5.2 -4.72631 | opp_overlap 3145694, overlap 3145698 3145714 GCTGGCGATTGCCAT CGCGGGTGTG CTGG TACATCCGAG TTTTATTGAATTAAT ascF 3145164 - 3146621 + | fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component ; IIC component TERM 4285 3147407 - 3147418 + G 84 -3.6 -5.29782 | GCGCTGGAGAAAGAC CGGG AAAA CCTG TTTTTTATCGATGTG ascB 3146630 - 3148054 + | cryptic 6-phospho-beta-glucosidase TERM 4286 3148095 - 3148059 - T 75 -9.4 -3.43338 | gap 1, opp_overlap 3148072, overlap 3148061 3148062 ATTTAGAGTAAGTAA CAGTGCCGGATGCGGCG TGAA CGCCTTATCCGGC-CTA CATGTCGCACGAACC TERM 4287 3148093 - 3148061 - T 74 -9.8 -3.28487 | gap 1, opp_overlap 3148072, overlap 3148059 3148062 TTAGAGTAAGTAACA GTGCCGGATGCGGCG TGAA CGCCTTATCCGGC-C TACATGTCGCACGAA TERM 4288 3148093 - 3148062 - T 70 -10 -2.5661 | opp_overlap 3148072, overlap 3148061 3148059 TAGAGTAAGTAACAG TGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACATGTCGCACGAA hycI 3148682 - 3148212 - | protease involved in processing C-terminal end of HycE TERM 4289 3148538 - 3148548 + g 70 -6.8 -4.14243 | GCAGTTCGCGGATAG CGAC AAT GTCG TTTTCCGGTGCGCTA hycH 3149085 - 3148675 - | protein required for maturation of hydrogenase 3 hycG 3149849 - 3149082 - | hydrogenase 3 and formate hydrogenase complex, HycG subunit hycF 3150391 - 3149849 - | formate hydrogenlyase complex iron-sulfur protein hycE 3152110 - 3150401 - | hydrogenase 3, large subunit TERM 4290 3151780 - 3151807 + g 73 -12 -2.59094 | gap 1, overlap 3151779 GCTCGCCCCATACCG CCG-CCGGAACGC GCG GCGTTACGGACGG ATATTCCTGTTTGTT hycD 3153051 - 3152128 - | hydrogenase 3, membrane subunit hycC 3154880 - 3153054 - | hydrogenase 3, membrane subunit hycB 3155488 - 3154877 - | hydrogenase 3, Fe-S subunit TERM 4291 3155339 - 3155356 + g 71 -2.7 -4.86621 | gap 1, opp_overlap 3155341, overlap 3155341 3155342 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTGAGCAT TERM 4292 3155564 - 3155526 - R 80 -8.3 -4.2558 | gap 1 CATTTTTGACGAAAA CATGCCGATGAAATGTCA TTTT CGACACT-CATCGACACG CCCATCCCCAAACAG TERM 4293 3155591 - 3155577 - R 87 -11.4 -3.57263 | opp_overlap 3155589 ACGCCCATCCCCAAA CAGGCG TAA CGCCTG CAAAACGGGCAAAGC hycA 3156074 - 3155613 - | regulator of the transcriptional regulator FhlA hypA 3156286 - 3156636 + | protein involved in nickel insertion into hydrogenases 3 TERM 4294 3156916 - 3156903 - g 75 -4.5 -4.82901 | CGTGCTGGACAAAAA CAACC GTCT GGCTG AACGCAACCGCGCGC hypB 3156640 - 3157512 + | GTP hydrolase involved in nickel liganding into hydrogenases TERM 4295 3157558 - 3157588 + G 73 -9.1 -3.67976 | gap 1, opp_overlap 3157550 3157557 3157558 GCAACCAGGCGAAAG TCGACGTCTGCG GCATTCAG CGC-GACGTCGA TTTAACGTTAGTCGG TERM 4296 3157625 - 3157661 + G 88 -12.4 -3.60296 | gap 1 CGATGAAAACGGTCA GCCACGCGTGGGCCAGT GGGT ACTGGTTCACGT-TGGC TTTGCCATGAGCGTA hypC 3157503 - 3157775 + | protein required for maturation of hydrogenases 1 and 3 TERM 4297 3158125 - 3158113 - g 73 -9.1 -3.70902 | GCTGTTACAGGCAAA GGCAC GCG GTGCC GATGTGCGCATCGTT TERM 4298 3158388 - 3158409 + G 72 -5.9 -4.36914 | GTCACGTTAGTATGG TTATCGGCA CTGA TGCCTATAA TTTTATCGCCAGCGA hypD 3157775 - 3158896 + | protein required for maturation of hydrogenases TERM 4299 3159660 - 3159631 - g 76 -10.7 -3.39936 | gap 1, opp_overlap 3159651 3159652, overlap 3159632 3159649 ATTGAAATTTCAGAA GCGGCACTGCCGGT TAA ACCAGCCGTGC-GC GGCGTTTGCGAACTG hypE 3158935 - 3159903 + | carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein TERM 4300 3159943 - 3159959 + F 100 -13.7 -3.72576 | AGTCAATGACCTTTT GCACCGC TTT GCGGTGC TTTCCTGGAAGAACA TERM 4301 3160058 - 3160074 + G 74 -10.1 -3.42663 | overlap 3160057 CAGCAGCCCGATCTG GCCTCGC TGT GTGAGGC TCTTTCGCTACTGGT TERM 4302 3160145 - 3160093 - g 77 -10 -3.57144 | gap 2, opp_overlap 3160104 3160106 3160141 TTCGCTACTGGTAAA GCGTTCTGCGCTCGCCGACAACGC GGCTATT GTGTTGT-GGCAAGCGCAGA-CTC AACGTGCGTCTTATT TERM 4303 3161571 - 3161559 - g 85 -3.3 -5.44119 | overlap 3161560 GCGATCTGAAAAAAA TGGTC GCC GACCG AGAGTTCCGTAGCGA fhlA 3159977 - 3162055 + | DNA-binding transcriptional activator TERM 4304 3162234 - 3162202 - g 70 -6.9 -4.08216 | opp_overlap 3162201 3162225 GCAGGTGGTGCAAAA CTGGTGGCAATTGTG ACT CACAGCAGCCAGCAG GCTCTTGGTCTGGCA ECUMN_3055 3162061 - 3162528 + | Putative molybdenum-pterin-binding-protein TERM 4305 3162537 - 3162565 + T 100 -16.1 -4.78326 | overlap 3162539 AGCGTAAACGCCTTA TTTGCCGGAGAGT ATG GCTCTCCGGCAGA TTTATTTCTTTGGAC TERM 4306 3162539 - 3162563 + T 100 -16.5 -2.66462 | overlap 3162537 CGTAAACGCCTTATT TGCCGGAGAGT ATG GCTCTCCGGCA GATTTATTTCTTTGG ygbA 3162911 - 3162567 - | hypothetical protein TERM 4307 3164790 - 3164773 - g 70 -4.1 -4.62069 | opp_overlap 3164775 CTGGCACTGGAAAAA CAGCTTT ATGA AGAGCTG TTCGACCTGCTGTTG mutS 3163198 - 3165759 + | methyl-directed mismatch repair protein TERM 4308 3165763 - 3165796 + F 74 -10.5 -3.18118 | gap 1, opp_overlap 3165766, overlap 3165760 3165758 3165764 3165766 AGTCTGGTGTAATAT TA-ATGAGCCCCGA TTAAACT TCGGGGCTCATATA TCTCTTATCCGATAG TERM 4309 3165764 - 3165794 + F 81 -11.2 -3.15013 | opp_overlap 3165766, overlap 3165763 3165760 3165758 3165766 GTCTGGTGTAATATT AATGAGCCCCGA TTAAACT TCGGGGCTCATA TATCTCTTATCCGAT TERM 4310 3165792 - 3165766 - f 100 -13.8 -3.36273 | opp_overlap 3165764 3165763 3165760 3165758 3165766 CTGGTGTAATATTAA TGAGCCCCGA TTAAACT TCGGGGCTCA TATATCTCTTATCCG TERM 4311 3165766 - 3165792 + F 93 -13.8 -3.13191 | opp_overlap 3165766, overlap 3165764 3165763 3165760 3165758 CTGGTGTAATATTAA TGAGCCCCGA TTAAACT TCGGGGCTCA TATATCTCTTATCCG TERM 4312 3166338 - 3166326 - g 78 -7.7 -4.38843 | CAAAACATTAACAAA GCCAA GTA TTGGC TTCAGAAAGCAGTAC ECUMN_3058 3165864 - 3166727 + | hypothetical protein; putative exported protein TERM 4313 3167106 - 3167085 - g 93 -5.9 -5.20333 | opp_overlap 3167084 3167088 GATTCAGAACAAAAA GAAGCAATA GACC TGTTGCTTC GCTTTCATCATCTTC TERM 4314 3167357 - 3167390 + G 70 -5.2 -4.4009 | overlap 3167358 CAATCAGGTTTATAT TGATACCGGCTCGC CGGAAA GCGGGCGGTTATCG TTTTATAAAATAAAA pphB 3166740 - 3167408 + | serine/threonine-specific protein phosphatase 2 TERM 4315 3167412 - 3167442 + T 91 -6.9 -5.45652 | gap 2, opp_overlap 3167412 3167414, overlap 3167412 3167413 AAAATAAAATGACAA G-ACCGGGTA-AGGC AAA GCCTCTACCCGGCAC TTTTTTATTAACGCT TERM 4316 3167440 - 3167412 - T 80 -10.4 -3.79451 | opp_overlap 3167412 3167412 3167413, overlap 3167414 AAAATAAAATGACAA GACCGGGTA-AGGC AAA GCCTCTACCCGG-C ACTTTTTTATTAACG TERM 4317 3167412 - 3167441 + T 70 -7.1 -3.86307 | gap 1, opp_overlap 3167412 3167414, overlap 3167412 3167413 AAAATAAAATGACAA GACCGGGTA-AGGC AAA GCCTCTACCCGGCA CTTTTTTATTAACGC TERM 4318 3167413 - 3167440 + T 75 -10.6 -2.91061 | gap 1, opp_overlap 3167412 3167414, overlap 3167412 3167412 AAATAAAATGACAAG ACCGGGTA-AGGC AAA GCCTCTACCCGGC ACTTTTTTATTAACG TERM 4319 3167439 - 3167414 - T 100 -14.1 -3.44267 | gap 1, opp_overlap 3167413 3167412 3167412, overlap 3167412 AATAAAATGACAAGA CCGGGTA-AGGC AAA GCCTCTACCCGG CACTTTTTTATTAAC ECUMN_3060 3167686 - 3167450 - | conserved putative non-oxidative reversible hydroxyarylic acid decarboxylase ECUMN_3061 3169124 - 3167697 - | conserved putative non-oxidative hydroxyarylic acid decarboxylase activity TERM 4320 3168991 - 3168980 - G 70 -7.2 -4.11623 | overlap 3168981 TATTATCAAACCAAA GCGC GGGC GCGC CGTCGCCGATACGCC ECUMN_3062 3169717 - 3169124 - | conserved putative non-oxidative reversible hydroxyarylic acid decarboxylase TERM 4321 3169840 - 3169826 - H 91 -10 -4.65895 | TTCGTCACTGAAAAA CCGCTA TGA TAGCGG CAGATAGTTTGCCCG TERM 4322 3170099 - 3170124 + G 70 -6.7 -4.06678 | opp_overlap 3170100 3170103, overlap 3170100 TAGTCAGACGTGAAC ATGACGCCGCT GACA AGCGGCGACGC TTTGTCTGGCTGACT TERM 4323 3170120 - 3170103 - g 77 -12.7 -2.7555 | opp_overlap 3170100 3170099, overlap 3170100 CAGACGTGAACATGA CGCCGCT GACA AGCGGCG ACGCTTTGTCTGGCT ECUMN_3063 3169831 - 3170271 + | Transcriptional regulator hosA TERM 4324 3170373 - 3170350 - T 100 -14.6 -5.67711 | opp_overlap 3170350 CAAACAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT TERM 4325 3170350 - 3170373 + T 100 -12.4 -3.87075 | opp_overlap 3170350 CAAACAAAAGAAAAA GGCCAGCCTC GCTT GAGACTGGCC TTTCTGACAGATGCT rpoS 3171384 - 3170392 - | RNA polymerase, sigma S (sigma 38) factor nlpD 3172586 - 3171447 - | outer membrane lipoprotein TERM 4326 3171708 - 3171689 - G 70 -7 -4.07133 | opp_overlap 3171688 TACCGGCATAAACAA CGCGGCCA TCTG CGGTCGCG ATAATTGCCTGTCCT TERM 4327 3171911 - 3171925 + g 72 -5 -4.65078 | TGGTCGCAGTTGGCT TGTTGT TCG GCAACA TTTTGTTAGCACTCT TERM 4328 3172182 - 3172205 + g 83 -5.3 -5.04385 | GTTGCCAGTAATCCA GGCGATATA GAAAAG TGTGTCGCC TTTTTTCACGGTATA TERM 4329 3172555 - 3172543 - G 86 -10.5 -3.96224 | GAAACCAGTGACAAA GCCGC AAT GCGGC GAACGGTGAATTTTG pcm 3173352 - 3172726 - | L-isoaspartate protein carboxylmethyltransferase type II surE 3174107 - 3173346 - | broad specificity 5'(3')-nucleotidase and polyphosphatase truD 3175137 - 3174088 - | pseudoruidine synthase ispF 3175613 - 3175134 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3176323 - 3175613 - | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase TERM 4330 3176288 - 3176276 - G 73 -9.1 -3.57462 | CATTCGACGGCCAAA TCCGG CCG CCGGA ACCACGGCGCAAACA ftsB 3176653 - 3176342 - | cell division protein TERM 4331 3176736 - 3176758 + r 77 -11.4 -2.82142 | opp_overlap 3176734, overlap 3176735 ATACCGCGACAACGC GGGCAAATGT ACC ACATTTGTCC ATTGTTACGTATACC ygbE 3177170 - 3176847 - | conserved hypothetical protein; putative inner membrane protein cysC 3177825 - 3177220 - | adenosine 5'-phosphosulfate kinase TERM 4332 3177765 - 3177735 - G 79 -12.6 -3.00525 | opp_overlap 3177731 3177735, overlap 3177730 3177738 GGCCGGTAAACCACA GCACTACACCACGA TGA CCGTGGTGTAGCTC GCGTTGTTGTACAGT TERM 4333 3177762 - 3177738 - G 90 -15.1 -2.7314 | opp_overlap 3177735 3177731, overlap 3177735 3177730 CGGTAAACCACAGCA CTACACCACGA TGA CCGTGGTGTAG CTCGCGTTGTTGTAC cysN 3179252 - 3177825 - | sulfate adenylyltransferase, subunit 1 TERM 4334 3178388 - 3178372 - G 70 -5.8 -4.26076 | opp_overlap 3178372 CGATCGCCATCAAAA GTCACG ATCCG CGCGAC GTTTGATTCCACACC cysD 3180162 - 3179254 - | sulfate adenylyltransferase, subunit 2 TERM 4335 3180314 - 3180302 - H 75 -4.8 -4.88228 | opp_overlap 3180311 AGCTAATATCAAAAA GTGC TTAAG GCAC CGGATTTCGGGCGTT TERM 4336 3181324 - 3181297 - g 75 -5.6 -4.62872 | gap 1 AGCAACGCGCAAAAA CAGCTGCATTCCC TGC GGGAA-ATAGCTG GCATGACGTAAGACT iap 3180414 - 3181451 + | aminopeptidase in alkaline phosphatase isozyme conversion TERM 4337 3181470 - 3181504 + F 77 -11.5 -2.65264 | gap 1, opp_overlap 3181469 GTTTGAAAATAGGAG CTGGGAGTTCTACCGC AGGG GCGG-GGAACTCCAAG TGATGTCCATCATCG TERM 4338 3182078 - 3182116 + GF 71 -9.5 -3.01831 | gap 1 CAGCAAATGCTGGAT GTGGCGGTTTATCCCCGC TGGC GCGGGGA-ACACCACCCC TGATATTTTTGCCAC ECUMN_3078 3181806 - 3182324 + | hypothetical protein ECUMN_3079 3182233 - 3182613 + | hypothetical protein ygbF 3182988 - 3182695 - | hypothetical protein ECUMN_3083 3184693 - 3183905 - | hypothetical protein ECUMN_3084 3185283 - 3184537 - | hypothetical protein ECUMN_3085 3186349 - 3185294 - | hypothetical protein TERM 4339 3186213 - 3186201 - G 71 -9.1 -3.44553 | opp_overlap 3186200 3186201, overlap 3186193 TCAAAAAGTGCAGAA GTGCG CCA CGCAC GTTTCAGACTTTGTG ECUMN_3086 3186900 - 3186364 - | hypothetical protein TERM 4340 3186904 - 3186915 + r 76 -5.8 -4.87665 | TACAATACTCATTCA GCAG CCTC CTGC TTTTTCTCCCTGGCG ECUMN_3087 3188465 - 3186897 - | hypothetical protein TERM 4341 3187873 - 3187885 + g 72 -6.2 -4.32951 | opp_overlap 3187858, overlap 3187881 TTGAGCCACAGTTTG CGCC ACAAG GGCG TTTGTTGATTGCCCT TERM 4342 3188378 - 3188401 + g 70 -10.3 -3.26719 | overlap 3188373 3188371 TTTCATCCGCCAGAT CGACAGGCG CCAGTT TGCCTGTCG TTCCGTCTTTATAAC TERM 4343 3188493 - 3188480 - R 74 -3.8 -5.00616 | TCCTCTCGTAAAAAA GACC ATCCTA GGTC GGTTGTCCATCATTC ECUMN_3088 3191256 - 3188557 - | hypothetical protein TERM 4344 3191446 - 3191423 - R 72 -9.5 -3.2534 | opp_overlap 3191418 3191444, overlap 3191418 3191425 ACCATCACAATTCAA TACGCGGGG TTTTAC CCCCGCGTG GTGGCTACTTCTTCG TERM 4345 3191444 - 3191425 - R 83 -12.1 -3.18768 | opp_overlap 3191418, overlap 3191423 3191418 CATCACAATTCAATA CGCGGGG TTTTAC CCCCGCG TGGTGGCTACTTCTT ECUMN_3089 3191603 - 3191451 - | similar to host killing peptides encoded by hok genes TERM 4346 3191661 - 3191691 + r 88 -9.1 -4.45083 | gap 1, opp_overlap 3191625 3191682 TAGGTTCGAACGCTG GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 4347 3191847 - 3191822 - R 100 -9.7 -5.45802 | opp_overlap 3191822 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 3192602 - 3191868 - | 3'-phosphoadenosine 5'-phosphosulfate reductase cysI 3194388 - 3192676 - | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding TERM 4348 3193060 - 3193031 - G 70 -5.7 -4.37092 | gap 1 ATGTTGTCGATAAAA GACGGCAGGAAACG CTC CGCTTCG-GCCATC GCCAGCGGGCAAGTC cysJ 3196187 - 3194388 - | sulfite reductase, alpha subunit, flavoprotein TERM 4349 3195724 - 3195770 + g 71 -2.4 -5.00616 | gap 3, opp_overlap 3195738, overlap 3195725 3195738 AATTCATAAGAGCTA TCGCCGAGGCT---AAACACGGC AAAT GCGGTGTTTTCCAGCTTCGGCGC TTTTTTGGAGAACAG TERM 4350 3196096 - 3196082 - G 70 -7.1 -4.0056 | overlap 3196074 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TGGGAGTTAAATCGG TERM 4351 3196414 - 3196434 + H 70 -6.2 -4.21194 | ATTAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA TERM 4352 3196850 - 3196830 - g 77 -9.7 -3.57144 | opp_overlap 3196834, overlap 3196834 3196836 GCGGTTATGGTGAAA GAAACCTGC ACC GCAGGTTGC ATCTATCGCGGCGAA TERM 4353 3196846 - 3196834 - g 86 -9.1 -4.42806 | opp_overlap 3196834, overlap 3196830 3196836 TTATGGTGAAAGAAA CCTGC ACC GCAGG TTGCATCTATCGCGG ygcM 3196503 - 3196868 + | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) TERM 4354 3196994 - 3197025 + G 91 -11.5 -4.08689 | overlap 3196995 3197022 GCCGGTATTGCAGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGG TTTATCCGTTTTGTT TERM 4355 3196995 - 3197024 + G 93 -15 -3.03587 | overlap 3196994 3197022 CCGGTATTGCAGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG GTTTATCCGTTTTGT TERM 4356 3197022 - 3197033 + G 70 -3.6 -4.71426 | overlap 3196995 3196994 TACGCTGCGCGCGAG CGGG TTTA TCCG TTTTGTTACTGGAAC TERM 4357 3197682 - 3197698 + G 74 -10.1 -3.53811 | overlap 3197678 GTCGTGTTCCGGCAA GCGAGCT GCT GGCTCGC TTTAAAACGCATCCG ygcN 3196946 - 3198217 + | putative oxidoreductase with FAD/NAD(P)-binding domain ygcO 3198208 - 3198468 + | putative 4Fe-4S cluster-containing protein TERM 4358 3198554 - 3198577 + G 82 -7.4 -4.49906 | opp_overlap 3198541 AATGCCAGCCTGCAA CTGGCAATCG ACTC TGAATGCCAG TTTATTTCCGTGTTG ygcP 3198485 - 3199060 + | putative anti-terminator regulatory protein ygcQ 3200067 - 3199207 - | putative flavoprotein ygcR 3200843 - 3200064 - | putative flavoprotein TERM 4359 3200408 - 3200389 - G 72 -6.4 -4.34402 | opp_overlap 3200405 3200406, overlap 3200390 GCGTCGAGAGTAAAA CGCTCCAC CTGG GTGAAGCA GGGCCAGCCCAGCAT ygcS 3202158 - 3200821 - | putative transporter TERM 4360 3201549 - 3201539 - G 77 -8.2 -4.08216 | opp_overlap 3201539, overlap 3201540 TGAGCTTCTGCAAAA CGCC CCT GGCG CAGTAGCCAGCGTGG TERM 4361 3202210 - 3202189 - R 100 -14.5 -3.9461 | GTCCGGTAATAAGAA CGGCTTCTC GCCT GAGAAGCCG AAAAGGCAACGCCCC TERM 4362 3202244 - 3202215 - R 93 -11.4 -4.21936 | CTGAGAAGCCGAAAA GGCAACGCCCCG TCATCG CGGAACGCTGCC TGACACATTATTTTT ygcU 3203706 - 3202252 - | putative FAD containing dehydrogenase TERM 4363 3202821 - 3202837 + g 70 -10.1 -3.17392 | TCCCTTCGCCCGTCG CCTTCGC AAT GCGAGGG TTACCTTCAGCCATA TERM 4364 3203111 - 3203131 + g 78 -5.3 -4.76644 | overlap 3203115 TGACGAATGTCCGGG CCTGCCGCG CGG CGTGGTACG TTTTTAATGCGTGTT ygcW 3204561 - 3203776 - | putative deoxygluconate dehydrogenase TERM 4365 3204632 - 3204595 - H 100 -22.3 -6.15259 | opp_overlap 3204595 3204599 TAAGGCAAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4366 3204595 - 3204632 + H 100 -20.1 -2.92712 | opp_overlap 3204595, overlap 3204599 TAAGGCAAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4367 3204599 - 3204628 + H 100 -15.1 -4.13 | opp_overlap 3204595, overlap 3204595 GCAAAAAAAAAGAAA GGTAACTTCCCCC GCGA GAGGGAAGTTACC TTTCTCATTATCTCT TERM 4368 3204636 - 3204658 + H 87 -7.8 -4.91109 | AAGTTACCTTTCTCA TTATCTCTGG TAA CTGGAGATAA TTTTTATCATAAGGG TERM 4369 3204808 - 3204847 + H 100 -13 -6.08563 | opp_overlap 3204815 AATTACTAGAGACCT GAGAAAAGTAATCCACCT GAAA GGGCGGCTTACTTTTCTC TTTTTTTTGTCTATT TERM 4370 3204840 - 3204815 - H 70 -5.4 -4.4195 | opp_overlap 3204808 AGAGACCTGAGAAAA GTAATCCACC TGAAAG GGCGGCTTAC TTTTCTCTTTTTTTT yqcE 3204880 - 3206157 + | putative transporter TERM 4371 3206535 - 3206554 + G 70 -4.2 -4.69622 | overlap 3206538 GAACATACGAATCCT GACGTGGC ATAT GTCACCTC TTTTTCAGGTTATCT TERM 4372 3206775 - 3206790 + G 83 -10.4 -4.06419 | CTGGCGACACATTTC CCGGCA GGAC TGCCGG TTGTTTGTACCACCA ygcE 3206184 - 3207662 + | putative kinase TERM 4373 3207694 - 3207671 - T 72 -9.4 -3.21912 | overlap 3207672 TGCGTAAGTGAGGAA GGCCGGGCGG GAAA CTGCCCGGCA TGAACGTACCTGAAT TERM 4374 3207693 - 3207672 - T 84 -12.9 -2.52933 | overlap 3207671 GCGTAAGTGAGGAAG GCCGGGCGG GAAA CTGCCCGGC ATGAACGTACCTGAA TERM 4375 3209192 - 3209212 + T 75 -8.5 -3.72893 | opp_overlap 3209159 TTTACAGGTTCCACC CATTTATAA CGC TTATAAATG TTTAATCAGGCAATA ygcF 3209889 - 3209218 - | hypothetical protein TERM 4376 3209741 - 3209730 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 4377 3209833 - 3209820 - G 84 -3.7 -5.24551 | overlap 3209821 GTAAACGAATAAAAA TGGCG GGGA CGCCG GTAAAGTAACCCTCA ECUMN_3105 3210062 - 3210664 + | hypothetical protein ygcG 3210648 - 3211571 + | hypothetical protein ECUMN_3107 3211586 - 3212734 + | hypothetical protein ECUMN_3109 3212728 - 3213645 + | hypothetical protein TERM 4378 3213661 - 3213680 + T 100 -13.6 -4.66609 | opp_overlap 3213661 CTCAACCATAAAAAA TGCCAGCC CGAA GGCTGGCA TTTTTAAATCAGATA TERM 4379 3213680 - 3213661 - T 100 -13.6 -5.37345 | opp_overlap 3213661 CTCAACCATAAAAAA TGCCAGCC CGAA GGCTGGCA TTTTTAAATCAGATA eno 3215003 - 3213705 - | enolase TERM 4380 3215046 - 3215074 + r 79 -11.7 -2.7458 | opp_overlap 3215048 3215051, overlap 3215045 CTGAAACTCCAGACA AACAACGCGTACC CAG GGTACGCGTTGCC GTTCTAACTTTTTTC TERM 4381 3215072 - 3215048 - R 100 -18.7 -4.07562 | opp_overlap 3215046 3215045, overlap 3215051 GAAACTCCAGACAAA CAACGCGTACC CAG GGTACGCGTTG CCGTTCTAACTTTTT TERM 4382 3215069 - 3215051 - R 100 -14.6 -4.15029 | opp_overlap 3215046 3215045, overlap 3215048 ACTCCAGACAAACAA CGCGTACC CAG GGTACGCG TTGCCGTTCTAACTT pyrG 3216727 - 3215090 - | CTP synthetase TERM 4383 3216397 - 3216418 + g 90 -11.5 -3.90744 | TAACCTGTACGGTTG CGCCGAGGT AGTC ACCGCGGCG TTCTTTACGCAGAAC mazG 3217746 - 3216955 - | nucleoside triphosphate pyrophosphohydrolase TERM 4384 3217284 - 3217296 + g 74 -7.7 -4.11869 | opp_overlap 3217284 3217280 TCCAGTCAAAACCAA CGTTG GCG CAACG TTTCTGGATTTTTTG TERM 4385 3217838 - 3217799 - R 80 -8.6 -4.2558 | opp_overlap 3217805, overlap 3217801 3217803 TACCTTCGAGTAAAA GATATCGCTGGATACGGC TGAC GCCATATCCAGCTATGTA AGACTAACTCCCGTG TERM 4386 3217836 - 3217801 - R 91 -11.2 -3.73042 | opp_overlap 3217805, overlap 3217799 3217803 CCTTCGAGTAAAAGA TATCGCTGGATACGGC TGAC GCCATATCCAGCTATG TAAGACTAACTCCCG TERM 4387 3217834 - 3217803 - R 100 -13.8 -3.44672 | opp_overlap 3217805, overlap 3217801 3217799 TTCGAGTAAAAGATA TCGCTGGATACGGC TGAC GCCATATCCAGCTA TGTAAGACTAACTCC TERM 4388 3217805 - 3217832 + r 89 -14.2 -2.88663 | opp_overlap 3217803 3217801 3217799 CGAGTAAAAGATATC GCTGGATACGGC TGAC GCCATATCCAGC TATGTAAGACTAACT relA 3220076 - 3217842 - | (p)ppGpp synthetase I/GTP pyrophosphokinase rumA 3221425 - 3220124 - | 23S rRNA (uracil-5)-methyltransferase TERM 4389 3222021 - 3222036 + G 72 -5.4 -4.56961 | AGAGATCTTTATTTC CAGCGT GATG ATGCTG TTTTGTATCGGTATT TERM 4390 3222354 - 3222333 - g 70 -4.3 -4.57569 | opp_overlap 3222334, overlap 3222334 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 4391 3223459 - 3223446 - g 71 -2.3 -5.02323 | overlap 3223441 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGTA barA 3221482 - 3224238 + | hybrid sensory histidine kinase, in two-component regulatory system with UvrY TERM 4392 3224428 - 3224459 + T 95 -10.9 -4.67943 | opp_overlap 3224434, overlap 3224434 GCGTTTGGCATCAGT CTCAAACCGGCTC CTGAAA GAGCCGGTTTTGG TTTTCTGTCTTAACG TERM 4393 3224453 - 3224434 - T 87 -11.4 -3.58343 | opp_overlap 3224428 3224434 GGCATCAGTCTCAAA CCGGCTCC TGAA AGAGCCGG TTTTGGTTTTCTGTC TERM 4394 3224434 - 3224453 + T 95 -10.7 -4.75518 | opp_overlap 3224434, overlap 3224428 GGCATCAGTCTCAAA CCGGCTC CTGAAA GAGCCGG TTTTGGTTTTCTGTC gudD 3225809 - 3224469 - | (D)-glucarate dehydratase 1 gudX 3227170 - 3225830 - | glucarate dehydratase gudP 3228524 - 3227172 - | putative D-glucarate transporter TERM 4395 3228695 - 3228677 - R 75 -4.4 -4.93898 | overlap 3228640 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA yqcA 3229448 - 3228999 - | putative flavoprotein truC 3230248 - 3229466 - | tRNA pseudouridine synthase yqcC 3230577 - 3230248 - | hypothetical protein TERM 4396 3230628 - 3230657 + r 81 -10.7 -3.51411 | opp_overlap 3230630, overlap 3230624 3230629 TAGCAGGAATAAAAA AAGGGAGCACTGT ATTC ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 4397 3230629 - 3230656 + r 87 -14.2 -2.70525 | opp_overlap 3230630, overlap 3230628 3230624 AGCAGGAATAAAAAA AGGGAGCACTGT ATTC ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 4398 3230655 - 3230630 - R 100 -17.7 -5.84381 | opp_overlap 3230629 3230628 3230624 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGTGCTCCC GGTTCGTTTCGCAGC syd 3231744 - 3231199 - | hypothetical protein TERM 4399 3232514 - 3232492 - g 71 -10.6 -2.86271 | opp_overlap 3232490 3232504 3232505, overlap 3232489 3232504 CCGTCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 3231812 - 3232660 + | NADPH-dependent 7-cyano-7-deazaguanine reductase TERM 4400 3233805 - 3233788 - g 73 -4.1 -4.86731 | gap 1, overlap 3233769 GCTGGTGAAAGAAAA TCGCC-GC GAC ACAGGCGA TGCCTACAGCTTTAA ygdH 3232772 - 3234136 + | hypothetical protein TERM 4401 3234147 - 3234168 + F 91 -10.1 -4.72556 | overlap 3234165 CGTAATCTCCCCTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG TERM 4402 3234422 - 3234447 + F 78 -8.5 -4.06527 | gap 1, overlap 3234428 AGAAGTCAGATGTCG TTTAATGGGCAA ATA TTGCCC-TTAAA TTCTCTTTTACTTTT TERM 4403 3234428 - 3234442 + F 76 -10 -3.32941 | overlap 3234422 CAGATGTCGTTTAAT GGGCAA ATA TTGCCC TTAAATTCTCTTTTA sdaC 3234693 - 3235982 + | putative serine transporter TERM 4404 3235991 - 3236010 + F 90 -12.8 -3.27786 | overlap 3236003 3236005 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 4405 3236817 - 3236797 - g 72 -5.3 -4.4767 | opp_overlap 3236797 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA sdaB 3236040 - 3237407 + | L-serine deaminase II TERM 4406 3237419 - 3237437 + F 86 -12.4 -3.16437 | overlap 3237411 TTAATCTCTCCCGGA GGCCTCGT TTT GCGAGGCC TCTTCCCGTTTTCTC TERM 4407 3237687 - 3237676 - g 75 -7.2 -4.30576 | overlap 3237678 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG exo 3237428 - 3238273 + | exonuclease IX (5'-3' exonuclease) TERM 4408 3238362 - 3238324 - T 79 -11.7 -2.60988 | opp_overlap 3238326 3238327, overlap 3238321 3238320 3238336 AATTTAATGAACTTA TACGCCGGATAAGACGC AGCTA GCGTCGCATCCGGCATT ATCACATCAGCGCAT TERM 4409 3238326 - 3238360 + T 74 -9.9 -3.32844 | opp_overlap 3238324 3238321 3238320 3238336, overlap 3238327 TTTAATGAACTTATA CGCCGGATAAGACGC AGCTA GCGTCGCATCCGGCA TTATCACATCAGCGC TERM 4410 3238327 - 3238359 + T 84 -13.4 -2.59564 | opp_overlap 3238324 3238321 3238320 3238336, overlap 3238326 TTAATGAACTTATAC GCCGGATAAGACGC AGCTA GCGTCGCATCCGGC ATTATCACATCAGCG fucO 3239529 - 3238378 - | L-1,2-propanediol oxidoreductase TERM 4411 3238733 - 3238717 - G 70 -5.7 -4.38712 | TGGAGTGTTATAAAA CGCGCCC AGT GGATGCG CCATACCATGCACCA fucA 3240201 - 3239554 - | L-fuculose-1-phosphate aldolase TERM 4412 3240425 - 3240392 - H 71 -3.9 -4.74801 | TAACCCTATTAAAAA TGACCGCTCTTAAAA ATAT TTATCAAAACGGTCA TTTTTCCATTCCCCC TERM 4413 3240937 - 3240954 + G 77 -6.3 -4.62957 | gap 1 ACAAATTTCCAGGCT GGCCTGAT CCA ATC-GGCC TTTTACTTTGGTTAT fucP 3240748 - 3242064 + | L-fucose transporter TERM 4414 3242118 - 3242107 - g 93 -2.2 -5.65513 | CAGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC TERM 4415 3242823 - 3242807 - g 71 -3 -4.82901 | gap 1, overlap 3242809 CTGGGCTGATAAAAA CTTCCGC TATG GCG-AAG ATGAAAATAACAAAC fucI 3242097 - 3243872 + | L-fucose isomerase TERM 4416 3243937 - 3243964 + F 86 -12.9 -3.01791 | overlap 3243939 ACAAGCAAGAGTGGT TAGCCGGATAA ACAATG TTATCCGGCTA TATTGCAGGAGCGAT TERM 4417 3243939 - 3243962 + F 76 -11.1 -3.06696 | overlap 3243937 AAGCAAGAGTGGTTA GCCGGATAA ACAATG TTATCCGGC TATATTGCAGGAGCG fucK 3243951 - 3245399 + | L-fuculokinase fucU 3245401 - 3245823 + | L-fucose mutarotase TERM 4418 3245819 - 3245809 - f 77 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATACCGG TERM 4419 3245836 - 3245856 + F 74 -9.6 -3.34043 | overlap 3245837 TAATCTCATACCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 4420 3245837 - 3245855 + F 84 -13.1 -2.60212 | overlap 3245836 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 4421 3246129 - 3246147 + G 72 -11.6 -2.52464 | opp_overlap 3246128 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 3245881 - 3246612 + | DNA-binding transcriptional activator ygdE 3247756 - 3246656 - | putative methyltransferase ygdD 3248144 - 3247749 - | conserved hypothetical protein; putative inner membrane protein TERM 4422 3248117 - 3248103 - G 74 -8.5 -3.88603 | AGCCACAAAAATGAA GCCGC TAATG GCGGC AAAAATCAGCATAAA gcvA 3249080 - 3248163 - | DNA-binding transcriptional dual regulator TERM 4423 3249322 - 3249336 + rH 93 -10 -5.17576 | opp_overlap 3249321 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 4424 3249387 - 3249406 + Gr 100 -10.7 -6.15259 | opp_overlap 3249387 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTTACCTTG TERM 4425 3249406 - 3249387 - gR 74 -10.7 -2.57423 | opp_overlap 3249387 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTTACCTTG ygdI 3249659 - 3249432 - | hypothetical protein ECUMN_3138 3249375 - 3249692 + | hypothetical protein csdA 3249851 - 3251056 + | cysteine sulfinate desulfinase ygdK 3251056 - 3251499 + | putative Fe-S metabolism protein (sufE-like) TERM 4426 3251545 - 3251508 - T 100 -17.1 -3.59946 | opp_overlap 3251508 3251509 3251511, overlap 3251509 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTACCCCTGAC TERM 4427 3251508 - 3251545 + T 100 -12.7 -3.92542 | opp_overlap 3251508 3251509, overlap 3251509 3251511 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTACCCCTGAC TERM 4428 3251509 - 3251544 + T 100 -16.2 -2.95204 | opp_overlap 3251508 3251509, overlap 3251508 3251511 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTACCCCTGA TERM 4429 3251544 - 3251509 - T 100 -18.4 -2.75647 | opp_overlap 3251509 3251508 3251511, overlap 3251508 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTACCCCTGA TERM 4430 3251511 - 3251542 + T 86 -13 -3.02639 | opp_overlap 3251509 3251508, overlap 3251509 3251508 TTAAGCACAGAACCA GGTCGGATAAGACG TTCG CGTCGCATCCGACC TGATTGTTTACCCCT ygdL 3252356 - 3251550 - | hypothetical protein TERM 4431 3252396 - 3252376 - R 93 -10.4 -4.93365 | CCTCAGAATTAAAAA GGGCGAGG TTATC CCTCACCC TAAACGCATAAATGC TERM 4432 3252515 - 3252486 - R 80 -10.7 -3.30124 | opp_overlap 3252463 TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACAAC GCGCACTTAGTCAAT TERM 4433 3252560 - 3252534 - R 74 -10.8 -2.8082 | opp_overlap 3252534 3252536, overlap 3252533 3252536 CACTTAGTCAATAAT CAGGATGTGAGG TTA CCCCTCACCCTG TCATATCCGTAAAAA mltA 3253692 - 3252595 - | membrane-bound lytic murein transglycosylase A TERM 4434 3254315 - 3254328 + r 100 -8.1 -6.02919 | opp_overlap 3254315 CAACCAATTATTGAA CACCC TAAC GGGTG TTTTTTTGTTTCTGC TERM 4435 3254372 - 3254359 - R 93 -5.9 -5.60993 | opp_overlap 3254359 TCTCCCATAAAAAAA GCGCC ATTC AGCGC CTTTTTATCATCCCC amiC 3255633 - 3254380 - | N-acetylmuramoyl-L-alanine amidase TERM 4436 3254692 - 3254702 + g 78 -8.2 -4.25104 | opp_overlap 3254692 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTCACGCCAC TERM 4437 3254973 - 3254997 + g 70 -3.5 -4.61527 | opp_overlap 3254965, overlap 3254963 TCAGAGAGCGCAAAC GGCGAGCTATT TGC AATACCACGTC TTTTTCGCGCGTTTT TERM 4438 3257157 - 3257142 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 3255865 - 3257196 + | fused acetylglutamate kinase homolog (inactive) ; amino acid N-acetyltransferase TERM 4439 3257201 - 3257256 + T 70 -7.6 -3.87815 | gap 1, opp_overlap 3257207 3257209, overlap 3257207 ATTTGGGGTAAGCGA TGAAAATCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAATTA-CG TTTATCCCCGTGAAC TERM 4440 3257207 - 3257251 + T 100 -14.3 -3.32997 | opp_overlap 3257207 3257209, overlap 3257201 GGTAAGCGATGAAAA TCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAA TTACGTTTATCCCCG TERM 4441 3257251 - 3257207 - T 100 -14.3 -4.30978 | opp_overlap 3257201 3257207, overlap 3257209 GGTAAGCGATGAAAA TCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGCAA TTACGTTTATCCCCG TERM 4442 3257249 - 3257209 - T 89 -14.7 -2.50381 | opp_overlap 3257207 3257201, overlap 3257207 TAAGCGATGAAAATC GCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCCGGC AATTACGTTTATCCC recD 3259084 - 3257258 - | exonuclease V (RecBCD complex), alpha chain TERM 4443 3257996 - 3258012 + g 79 -4.3 -5.00616 | opp_overlap 3257994 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 4444 3258788 - 3258766 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCACC ACA GAGGATCATC GGCGTTGGTTCATCT recB 3262626 - 3259084 - | exonuclease V (RecBCD complex), beta subunit TERM 4445 3261273 - 3261289 + g 72 -10.1 -3.32498 | CGCTGTTCACCATTC CTGGTGC GGA GCGCCAG TTGGTATCTAAAGTG TERM 4446 3261585 - 3261597 + g 74 -6.2 -4.57569 | overlap 3261584 3261592 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 4447 3261708 - 3261729 + g 76 -9.3 -3.76379 | CCTCAAACAGTGGAT GTCGCGGGG TTTC CCCCCCGGC TTTCGTGCGATCTTC TERM 4448 3262494 - 3262480 - G 71 -9.2 -3.53224 | overlap 3262491 CAGCGGGCGGGGAAA GGCGGC AGA ACCGCC TAGTCCAAGTAACAG TERM 4449 3262595 - 3262569 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptr 3265507 - 3262619 - | protease III TERM 4450 3263243 - 3263260 + g 72 -5.5 -4.58395 | CGCTGCCAGTGCGGA GTCGGTG CTGT TACCGGC TTTTTCAAAGATGAC TERM 4451 3264693 - 3264721 + g 84 -3.7 -5.28755 | overlap 3264688 3264694 3264701 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT recC 3269051 - 3265683 - | exonuclease V (RecBCD complex), gamma chain TERM 4452 3265831 - 3265853 + g 73 -4 -4.85599 | ATGTTGCCTTCGTAA GCCTGAAGGA ATT TCGTACGGGC TTTTTGTAACGTGGA TERM 4453 3266072 - 3266060 - G 78 -5.5 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCACC ATTACCACCGCTGGC ppdC 3269387 - 3269064 - | prepilin peptidase-dependent protein C precursor ygdB 3269779 - 3269372 - | hypothetical protein TERM 4454 3269453 - 3269440 - G 74 -3.1 -5.00616 | CGCGTGGCGAAAAAA CAATG TTTC CATCG ATGACTTCACCTGTT ppdB 3270339 - 3269776 - | prepilin peptidase-dependent protein B ppdA 3270800 - 3270330 - | prepilin peptidase-dependent protein A TERM 4455 3270963 - 3270944 - R 100 -10.7 -5.78622 | GGAGGGTAAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT thyA 3271779 - 3270985 - | thymidylate synthetase TERM 4456 3271652 - 3271622 - G 72 -11.1 -3.09516 | opp_overlap 3271638 TCGTGGATGATGGAA CGCAGGTGGCAAC GTTTG GTTGTCACCAGCG GGAATCCATCCTGCA lgt 3272661 - 3271786 - | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase ptsP 3275058 - 3272812 - | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I) ; GAF domain containing protein TERM 4457 3274364 - 3274404 + g 70 -10.6 -2.70932 | gap 2, opp_overlap 3274340 3274338 3274372, overlap 3274374 TCTTTTTGTGCACCG GCGGCAAA-GCGTTT-GCTG TAG CGGCGAAACTCGTTTGCCGC TCCTTCCAGCGCCCC nudH 3275601 - 3275071 - | nucleotide hydrolase TERM 4458 3276243 - 3276258 + H 73 -2.5 -5.04249 | TACACTGCGAATATT CGGCA CATAAT TGCTG TTTGTTTTTTAACCA TERM 4459 3276539 - 3276524 - g 76 -7.6 -4.27316 | opp_overlap 3276524 3276522 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCGCT TERM 4460 3276903 - 3276915 + G 85 -6.9 -4.86731 | CGAACGGATTCTGAC GCTGC CAC GCGGC TTTTATTTGAAGAAG mutH 3276286 - 3276975 + | methyl-directed mismatch repair protein ygdQ 3277044 - 3277757 + | conserved hypothetical protein; putative inner membrane protein ygdR 3277895 - 3278113 + | hypothetical protein TERM 4461 3278115 - 3278145 + F 80 -4.7 -5.20783 | opp_overlap 3278118 3278121, overlap 3278117 TTATTGAACGTTAAC TAATAAGGTCAGC ATCCG GCTGGCCTTAAGA TTTTTCTCTTTCCCT TERM 4462 3279047 - 3279037 - g 93 -8.2 -4.82855 | opp_overlap 3279036 3279034, overlap 3279039 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATCGC tas 3278221 - 3279261 + | putative oxidoreductase, NADP(H)-dependent aldo-keto reductase TERM 4463 3279263 - 3279290 + T 86 -12.8 -3.13403 | opp_overlap 3279264 3279268 3279280, overlap 3279268 ATCCGGCACCATAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC TERM 4464 3279289 - 3279264 - T 100 -16.3 -3.27475 | opp_overlap 3279263 3279268, overlap 3279268 3279280 TCCGGCACCATAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 4465 3279268 - 3279285 + T 86 -12.7 -3.20348 | opp_overlap 3279264 3279268 3279280, overlap 3279263 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 4466 3279285 - 3279268 - T 93 -12.7 -3.43203 | opp_overlap 3279268 3279263, overlap 3279264 3279280 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 4467 3279324 - 3279300 - T 75 -10.7 -2.8742 | opp_overlap 3279299, overlap 3279280 3279297 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG CTATTGCCAGCGCAA ygeD 3280486 - 3279293 - | conserved hypothetical protein; putative inner membrane protein TERM 4468 3279823 - 3279810 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 3282638 - 3280479 - | fused 2-acylglycerophospho-ethanolamine acyl transferase ; acyl-acyl carrier protein synthetase TERM 4469 3282751 - 3282734 - H 100 -12.7 -5.75945 | opp_overlap 3282734 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4470 3282734 - 3282751 + H 86 -12.7 -3.14132 | opp_overlap 3282734 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 4471 3282954 - 3282937 - H 100 -12.7 -6.07627 | opp_overlap 3282936 3282933 3282943 ACCGGCAAAAAAAAA CCTGCGC ATCT GCGCAGG CTGGTGTAATTCATG TERM 4472 3283153 - 3283173 + H 88 -11.1 -4.18494 | opp_overlap 3283151 ACGATGAAAACACGC CGCCCCTTG AAC CAACGGGCG TTTTCCGTAACACTG TERM 4473 3283478 - 3283492 + G 93 -3.6 -5.5604 | GGTCGAACAGGTGGC TTATCA CAC TGGTAA TTTTTTATTGATTGG galR 3283224 - 3284255 + | DNA-binding transcriptional repressor lysA 3285524 - 3284262 - | diaminopimelate decarboxylase, PLP-binding lysR 3285646 - 3286581 + | DNA-binding transcriptional dual regulator ECUMN_3168 3287635 - 3286568 - | putative racemase TERM 4474 3287382 - 3287356 - GT 100 -18.8 -5.30155 | CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGACGCC araE 3288807 - 3287389 - | arabinose transporter TERM 4475 3288598 - 3288577 - GR 71 -7.9 -3.84961 | overlap 3288589 CAGCCAACCATTAAA CAGCGCACC AATT GCTGCGCCG AGCATCATGCTACTG TERM 4476 3288864 - 3288846 - R 77 -4.6 -5.14477 | overlap 3288848 3288849 GACATAGTGAAAAAA TACGTGAA CAA TTCACACA GGTGTCAGGTCGGAA TERM 4477 3289099 - 3289082 - R 100 -12.7 -5.29782 | TACAGGTATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAA kduD 3289883 - 3289122 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4478 3289726 - 3289711 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTTGATGG kduI 3290749 - 3289913 - | 5-keto 4-deoxyuronate isomerase TERM 4479 3290694 - 3290709 + g 72 -4.6 -4.65895 | overlap 3290696 AATTCATTGCGCAGC CCCTGG GTAT CCAGCG TTTTTGCATGCGCAC TERM 4480 3290795 - 3290809 + r 73 -5 -4.60797 | overlap 3290796 AATAGAAAACGATAG TGAAAC GCT GTTTCG TTTTCTCTATAAGGG TERM 4481 3290955 - 3290942 - R 80 -6.7 -4.88222 | ATGAAAATGGAAAAA TCAGG GAGC CCTGA AAATGTATGTCGACT yqeF 3292218 - 3291037 - | Acetyl-CoA acetyltransferase TERM 4482 3292306 - 3292293 - H 100 -5.3 -5.75945 | ATTGTTTAAAAAAAA GTGAT TTTT ATCAC AAAGGGAATACGCCT TERM 4483 3292515 - 3292498 - g 78 -8.5 -4.17316 | ATTTGGTCAAAAGAA GAAACTC TGTG GAGTTTC GCGCTCTACGGCACA yqeG 3292474 - 3293703 + | putative transporter TERM 4484 3293710 - 3293751 + F 100 -16.3 -4.35461 | gap 1, opp_overlap 3293706, overlap 3293711 TTTAGCTAATATCCA TTGTGAATGGTTCAAAATTG CTA CAATTTTGAACCATTC-CAG TTTTCATAATGTTCA TERM 4485 3293711 - 3293750 + F 100 -17.6 -3.20553 | gap 1, opp_overlap 3293706, overlap 3293710 TTAGCTAATATCCAT TGTGAATGGTTCAAAATTG CTA CAATTTTGAACCATTC-CA GTTTTCATAATGTTC yqeH 3294163 - 3294795 + | conserved hypothetical protein; putative bipartite regulator domain TERM 4486 3294830 - 3294855 + F 82 -10.5 -4.11216 | ATCATACTCTGCTTA TACGGGCATCT ATTG AAATGCCCGTA TTTTACAAATAAGCA TERM 4487 3295263 - 3295286 + G 76 -3.8 -5.00884 | TCTACTTGAAGCTTT TCCTGATGTG GTTG CACAACAAGA TTTTTTCACCAGAGT yqeI 3295129 - 3295938 + | putative transcriptional regulator yqeJ 3295931 - 3296413 + | hypothetical protein yqeK 3296987 - 3296562 - | hypothetical protein ECUMN_3179 3297176 - 3297027 - | hypothetical protein ygeF 3297417 - 3297908 + | hypothetical protein TERM 4488 3298309 - 3298331 + G 70 -10.8 -2.7204 | opp_overlap 3298307 3298315, overlap 3298306 3298305 3298315 GTAATATAACGGACG CAGAAATTTA TTA TAAATTTCTG TGCATTTATGCGTTC ygeG 3298134 - 3298625 + | putative chaperone TERM 4489 3299307 - 3299292 - g 71 -3.3 -4.86613 | CAAAACTAAAAGAAA TGAAG ATAACA CTTCA GACTATTCCATAGCT ygeH 3298960 - 3300336 + | putative transcriptional regulator ygeI 3300462 - 3300722 + | hypothetical protein TERM 4490 3300747 - 3300773 + F 78 -10.3 -3.6187 | opp_overlap 3300747, overlap 3300743 CACTTAAATGATTAA CGAGATACTGA ATATA TTAGTATCTCG TTCCTTTCCTTCAAT ECUMN_3184 3300806 - 3301309 + | putative peptidoglycan-binding-like protein precursor TERM 4491 3301292 - 3301321 + T 100 -2.2 -6.0427 | overlap 3301294 GAAATAGACAAGCGT AAGGCTTTAG CAAAATAAGC CTAAAGCCTC TTTTTTTTATATAGT TERM 4492 3301294 - 3301319 + T 73 -4.8 -4.65669 | overlap 3301292 AATAGACAAGCGTAA GGCTTTAG CAAAATAAGC CTAAAGCC TCTTTTTTTTATATA ECUMN_3185 3301960 - 3301328 - | conserved hypothetical protein, putative Bacterial regulatory protein LuxR family TERM 4493 3301448 - 3301462 + g 76 -3.6 -4.94811 | CCTGCTTAACTGCAA GAAATT AGC GATTTC TTTGTTTGTTTTTCC TERM 4494 3301536 - 3301548 + g 81 -4.9 -5.03314 | opp_overlap 3301536 TGATTATCAGAGGAA TATCT TGA AGATA TTTTTTCACAATCCA ECUMN_3186 3302953 - 3302183 - | hypothetical protein TERM 4495 3302402 - 3302392 - GR 100 -4 -5.76949 | GATCTGTAAAAAAAA CAAA ACG TTTG TCATCATGATATGAA TERM 4496 3302433 - 3302419 - GR 70 -7.2 -3.86916 | opp_overlap 3302419 CATCATGATATGAAA TATGGA CAT TCCATA TTGACTTGTCGACAA ECUMN_3187 3303413 - 3302832 - | hypothetical protein eprK 3304163 - 3303429 - | Putative Type III secretion system lipoprotein EprK ECUMN_3189 3304492 - 3304160 - | conserved hypothetical protein, putative type III secretion apparatus protein TERM 4497 3304378 - 3304403 + g 75 -11.9 -2.9462 | opp_overlap 3304369, overlap 3304374 AGATCATTTTATCAT CCGGGTTATCA AGAT TGAGAACCCGG TCATTTAAATCAATA prgI 3304751 - 3304512 - | Type III secretion system needle protein eprH 3305955 - 3304765 - | Putative Type III secretion EprH protein TERM 4498 3305481 - 3305465 - G 84 -3.7 -5.2015 | TTAACAATATAAAAA GCTATAA AAA TGATAGC AAAAAGAAAAAATAG ECUMN_3192 3306205 - 3306705 + | conserved hypothetical protein, putative response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain ECUMN_3193 3306707 - 3307000 + | hypothetical protein TERM 4499 3307034 - 3307005 - T 78 -8.8 -4.02571 | gap 1, opp_overlap 3307006 3307009, overlap 3307009 TAACTCATTAAATAA TGAATCTACACGC TTTTT GCGTGTAGATT-A TTTTTAAATATCTGA TERM 4500 3307006 - 3307034 + T 91 -10.4 -4.72846 | opp_overlap 3307005 3307009, overlap 3307009 AACTCATTAAATAAT GAATCTACACGC TTTTT GCGTGTAGATTA TTTTTAAATATCTGA TERM 4501 3307009 - 3307031 + T 100 -12.1 -4.46215 | opp_overlap 3307009 3307005, overlap 3307006 TCATTAAATAATGAA TCTACACGC TTTTT GCGTGTAGA TTATTTTTAAATATC TERM 4502 3307031 - 3307009 - T 89 -12.1 -3.63839 | opp_overlap 3307006 3307009, overlap 3307005 TCATTAAATAATGAA TCTACACGC TTTTT GCGTGTAGA TTATTTTTAAATATC spaS 3308183 - 3307071 - | Surface presentation of antigens protein ECUMN_3195 3308959 - 3308192 - | putative Type III secretion protein EpaR TERM 4503 3308324 - 3308291 - G 71 -2.4 -4.90136 | overlap 3308284 3308282 AATTAATATTAAAAA TGCCAGCGCACT TTTGACAGTC AGTGAGATGGCA AAAGCATTTAGTTGT spaQ 3309308 - 3308961 - | surface presentation of antigens protein ECUMN_3197 3309897 - 3309232 - | putative type III secretion system protein EpaP epaO 3310834 - 3309887 - | Type III secretion apparatus protein eivJ 3311709 - 3310834 - | type III secretion protein ECUMN_3200 3312154 - 3311687 - | type III secretion apparatus protein TERM 4504 3311992 - 3312008 + g 71 -2.9 -4.75174 | GTAATTCCTTCATAT CTAACAG TGA CTGTAGG TTTTTAAGTTGCATA ECUMN_3201 3313454 - 3312135 - | ATP synthase spaL (Invasion protein invC) invA 3315519 - 3313459 - | invasion protein TERM 4505 3313697 - 3313682 - G 71 -3.2 -4.75472 | overlap 3313683 TCGAGATTAAGAAAA GTACCG CCAG CGGTAG GCCTGACACCATCTC ECUMN_3203 3316681 - 3315512 - | secreted protein TERM 4506 3316482 - 3316504 + g 72 -9.9 -3.31144 | opp_overlap 3316472 ATAAACTGCGTTAAC GCTGCTGAC ATCTC GTCAGTAGC TTGTAAGAATCGAGC ECUMN_3204 3318365 - 3316662 - | Protein invG precursor ECUMN_3205 3319111 - 3318362 - | Invasion protein invF (Transcriptional regulator invF) TERM 4507 3318994 - 3319010 + g 77 -7.3 -4.55128 | opp_overlap 3318994 TACCAATCGTAATAA CAAGGGT TAC ATCCTTG TTTTCATTTCCCCGT TERM 4508 3319372 - 3319382 + r 74 -5.4 -4.72497 | overlap 3319369 AGTTACACATTAACG CACT GCG AGTG TTTTGTTACTCCCTG TERM 4509 3319665 - 3319688 + r 75 -9.6 -3.44325 | ACGATTTCTCTTTGA GCGGTCCT TTTAATCC AGGACCGC TTCATTATGAAAACT ECUMN_3207 3321354 - 3319702 - | hypothetical protein TERM 4510 3320155 - 3320168 + g 70 -3.9 -4.62872 | ACCATACGGACCTGC TAGTT TTTT AACTA TTTTTAGAACTTGCT TERM 4511 3320229 - 3320262 + g 74 -6.1 -4.55887 | gap 1, opp_overlap 3320229, overlap 3320240 TTGCAGGATAAATAA CATTA-AGTAAAGCCG CAT CGGCTTCTCTGTAATG TTTATCTTTTTCCAG TERM 4512 3320262 - 3320229 - G 77 -8.3 -4.11183 | gap 1, opp_overlap 3320229 3320240 TTGCAGGATAAATAA CATTA-AGTAAAGCCG CAT CGGCTTCTCTGTAATG TTTATCTTTTTCCAG ygeR 3322473 - 3321697 - | Tetratricopeptide repeat transcriptional regulator TERM 4513 3321804 - 3321818 + g 76 -4.2 -5.00884 | opp_overlap 3321780 3321776 ATGCCGCATCAGTGC TCCCCA TAG TGGCGA TTTTTTGCCCAGCCT xdhA 3322904 - 3325162 + | xanthine dehydrogenase, molybdenum binding subunit TERM 4514 3325248 - 3325226 - g 70 -9.8 -3.16564 | TGCCGATGCCATCAA CCTGCTGGCT GAC AACCCGCAGG CCAAACTGCTCGCCG xdhB 3325173 - 3326051 + | xanthine dehydrogenase, FAD-binding subunit xdhC 3326048 - 3326527 + | xanthine dehydrogenase, Fe-S binding subunit TERM 4515 3326561 - 3326530 - T 93 -10.8 -4.5528 | opp_overlap 3326535, overlap 3326531 3326535 GAAAACGAAGTAAAA GGATATCCGGCCTG AATT CAGGCCGGATTCAC TGAGGTTATGTGTTT TERM 4516 3326559 - 3326531 - T 100 -14 -3.31541 | gap 1, opp_overlap 3326535, overlap 3326530 3326535 AAAACGAAGTAAAAG GATATCCGGCCTG AATT CAGGCCGGAT-TC ACTGAGGTTATGTGT TERM 4517 3326556 - 3326535 - T 100 -15.9 -3.14708 | opp_overlap 3326535, overlap 3326531 3326530 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG TERM 4518 3326535 - 3326556 + T 100 -15.9 -3.08471 | opp_overlap 3326535 3326531 3326530 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG ygeV 3328345 - 3326567 - | putative DNA-binding transcriptional regulator TERM 4519 3328647 - 3328637 - H 70 -6.8 -4.07877 | GTATTTTACAAACAA CCAG AAG CTGG CATCAATTTGTGATC TERM 4520 3328970 - 3328960 - g 75 -6.8 -4.30576 | GCCGCAGCATTAAAA GCAC TGC GTGC TGAAAACATCTCAAC TERM 4521 3329141 - 3329117 - g 70 -6.3 -4.15328 | AAGGCAAATCACAAA TCGCTCACGGC GAA ACCGTGCGTGA AACCGCCAATATGAT TERM 4522 3329429 - 3329393 - g 100 -7.3 -5.58209 | overlap 3329395 TGAAAGGTAAAAAAA TCGCCATGACCTGGG CCTACTC CCCAAGCTATGGCAA ACCGCTCTCTGTACC ygeW 3328822 - 3330012 + | hypothetical protein TERM 4523 3330019 - 3330040 + F 93 -13.7 -3.24232 | overlap 3330017 GTGAAATAACCCCTC GGGCCGATC AGCT GGTCGGCCC TCTATTTCCAGAGGC TERM 4524 3330358 - 3330346 - g 70 -4.9 -4.57569 | opp_overlap 3330354 TTATTGTGCGAAAAA TATCA TCT TGATA TCGAAACGCTGTCAT ygeX 3330070 - 3331266 + | 2,3-diaminopropionate ammonia-lyase ygeY 3331324 - 3332535 + | putative peptidase TERM 4525 3332553 - 3332572 + F 100 -15 -4.71482 | ACTCTTCACTTATTC CCCTCCGG TTCG CCGGAGGG TTTTTGGAGTTTGCT hyuA 3332588 - 3333973 + | D-stereospecific phenylhydantoinase yqeA 3334021 - 3334953 + | amino acid (carbamate) kinase TERM 4526 3334985 - 3334960 - T 93 -11.8 -3.78329 | opp_overlap 3334955 TGTCAGTAATTTAAA GGCCGGGTGG GTAATA CCATCCGGCC AAAGATTGTCAAGTA TERM 4527 3335139 - 3335165 + T 89 -10 -4.54727 | overlap 3335140 TTTGTCATCAGTCTC AGGCCGGGGGGT AAT ACCATCCGGCCA TTTTCATTTAAGCCA TERM 4528 3335140 - 3335164 + T 100 -13.5 -3.32354 | overlap 3335139 TTGTCATCAGTCTCA GGCCGGGGGGT AAT ACCATCCGGCC ATTTTCATTTAAGCC yqeB 3336798 - 3335173 - | conserved hypothetical protein; putative NAD(P)-binding Rossman fold TERM 4529 3336842 - 3336828 - R 70 -9.2 -3.14683 | opp_overlap 3336824 ATATCCTTTCAGTAA CCCGGA ATA CCCGGG CCGCTAATTCACAAA yqeC 3337616 - 3336846 - | hypothetical protein TERM 4530 3336989 - 3336976 - G 74 -3.1 -4.89852 | overlap 3336977 TCACATTGAGAAAAA CGGTT AATG AACCA GACTCGCCGACAACC TERM 4531 3337179 - 3337189 + g 72 -6.8 -4.2349 | opp_overlap 3337171 3337178 CATCACAGCAATCAC GCAG CAA CTGC TTTTGGGTATGCAAG ygfJ 3337719 - 3338297 + | hypothetical protein TERM 4532 3339267 - 3339231 - g 78 -5.7 -4.8048 | overlap 3339232 GGCTTACAGGAAAAA CGCGAATGCTTGCAGGC CTT ACCGGCACGCATCCCCA CCAGCATGGTACAAG TERM 4533 3339731 - 3339741 + G 73 -4 -4.78107 | TGCCAGTCAGCTGAC TATC CGC GATA TTTTTGATACTGGTA TERM 4534 3340754 - 3340734 - g 71 -3.2 -4.84359 | opp_overlap 3340735 3340738, overlap 3340735 3340738 CCAGGCGTAGAAAAA GCAACGGT CGTTT ACCGTCGT TCACTGCAAGAGATG ygfK 3338619 - 3341717 + | putative oxidoreductase, Fe-S subunit TERM 4535 3342135 - 3342145 + G 81 -6.8 -4.62471 | GGTCGCTCTCCACAT TGCG CAA CGCA TTTTTAAAAGTTGGC TERM 4536 3342310 - 3342325 + G 85 -11.8 -3.60098 | opp_overlap 3342286 3342309 GGTGGAAGCACATAT CGGCGC TCAC GCGCCG TTTACCGTGCCGGAT ssnA 3341720 - 3343048 + | putative chlorohydrolase/aminohydrolase TERM 4537 3343083 - 3343057 - f 100 -15.2 -4.17701 | opp_overlap 3343059, overlap 3343059 GGCATAAATGACAAA TACCCTCTTCCC GCA GGGAAGAGGGTT AAATAAGGAAAGAAG TERM 4538 3343081 - 3343059 - f 100 -17.8 -3.67823 | opp_overlap 3343059, overlap 3343057 CATAAATGACAAATA CCCTCTTCCC GCA GGGAAGAGGG TTAAATAAGGAAAGA TERM 4539 3343059 - 3343081 + F 100 -17.8 -3.05384 | opp_overlap 3343057 3343059 CATAAATGACAAATA CCCTCTTCCC GCA GGGAAGAGGG TTAAATAAGGAAAGA ygfM 3343099 - 3343878 + | putative oxidoreductase xdhD 3343875 - 3346745 + | fused putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit ; Fe-S binding subunit TERM 4540 3346771 - 3346754 - f 84 -8.3 -4.39107 | opp_overlap 3346753 3346755, overlap 3346755 AATATAAGTAATAAA TGGCCGC TTCG GCGGCCT GTTTCTCTGTTTGAA TERM 4541 3346755 - 3346770 + F 93 -11.8 -3.73323 | opp_overlap 3346754 3346755, overlap 3346753 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA TERM 4542 3346770 - 3346755 - f 83 -11.8 -3.21837 | opp_overlap 3346755 3346753, overlap 3346754 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA ygfO 3346910 - 3348310 + | putative transporter guaD 3348325 - 3349644 + | guanine deaminase TERM 4543 3350683 - 3350667 - g 73 -11.5 -2.77182 | overlap 3350664 3350677 GTTTATATCGAATCA GCGGCAG GAA CCGCCGC CGGGGGTAAAACAGG ygfQ 3349680 - 3351047 + | putative transporter TERM 4544 3351077 - 3351052 - T 78 -11.1 -3.1352 | opp_overlap 3351053, overlap 3351050 3351048 GGGCAATCTAATAGA TTCTCCGCGCC TTTC AGCGCGGAGAT TTCTTTCACAGAGGA TERM 4545 3351053 - 3351076 + T 100 -13.9 -4.41348 | opp_overlap 3351052 3351050 3351048 GGCAATCTAATAGAT TCTCCGCGC CTTTCA GCGCGGAGA TTTCTTTCACAGAGG ygfS 3351571 - 3351083 - | putative oxidoreductase, 4Fe-4S ferredoxin-type subunit ygfT 3353490 - 3351571 - | fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit TERM 4546 3352455 - 3352427 - G 77 -10.3 -3.57792 | opp_overlap 3352426 TTATCGAGTTTGAAA GGAGGTATGCCAA AAG TCAGCATACCGCC AATTTCTGGATGGCG TERM 4547 3353006 - 3353019 + g 78 -8.1 -4.30844 | CTGCGAGATGGCTGA GCGTC TGAT GACGC TTTTCCTGCTGCCGT TERM 4548 3353772 - 3353788 + H 83 -10.9 -3.60661 | GTTCTCTTCTCATTT TCGTGGT TTA ACCACGA TTATGTGATTGCCTC ygfU 3353926 - 3355374 + | transporter idi 3355624 - 3356172 + | isopentenyl diphosphate isomerase TERM 4549 3356194 - 3356177 - T 100 -10.5 -5.33848 | opp_overlap 3356177 AGCACAATTAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAACGT lysS 3357732 - 3356215 - | lysine tRNA synthetase, constitutive prfB 3358840 - 3357742 - | peptide chain release factor RF-2 TERM 4550 3357917 - 3357928 + g 79 -2.2 -5.20333 | overlap 3357884 TTATCTTCCATCGCC TGCT TCTC GGCA TTTTTCTTCTGCATC TERM 4551 3358833 - 3358847 + g 74 -2.8 -4.87892 | TTTACCGGATTAATT TCAAAC ATG GTCTGA TTTCTTTTATTGAGC TERM 4552 3358883 - 3358909 + r 100 -11.7 -5.24129 | gap 1, opp_overlap 3358883 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG TERM 4553 3358909 - 3358883 - R 85 -11.7 -3.30903 | gap 1, opp_overlap 3358883 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG recJ 3360664 - 3358931 - | ssDNA exonuclease, 5'--> 3'-specific TERM 4554 3360065 - 3360053 - G 70 -4.7 -4.58395 | CTGATCGCGCAAAAA GGTGC GCA GCGCC AGCATCAGATAAAAC dsbC 3361380 - 3360670 - | protein disulfide isomerase II TERM 4555 3360873 - 3360883 + g 84 -4 -5.19879 | CGGCCATCACATCAT CAAA CGC TTTG TTTTTATCTTTCGCA xerD 3362301 - 3361405 - | site-specific tyrosine recombinase fldB 3362413 - 3362934 + | flavodoxin 2 TERM 4556 3362941 - 3362970 + T 75 -8.5 -3.77188 | TACGCCTGATGTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TCTTTATCTTTGCGT ygfX 3363381 - 3362974 - | hypothetical protein ygfY 3363628 - 3363362 - | hypothetical protein ygfZ 3363871 - 3364851 + | enzyme component involved in 2-methylthio-6-iodeadenosine formation TERM 4557 3364851 - 3364899 + T 75 -8.9 -3.64716 | opp_overlap 3364853 3364854, overlap 3364854 3364855 3364856 3364888 TTCGCTCGAAGAGTA AATCTCTGTGTCGCATCAGGT ATTTATC GCCTGATGCGACACGGGTGTG TCTTTTCAGGCCTAC TERM 4558 3364896 - 3364853 - T 70 -7.5 -3.92324 | gap 1, opp_overlap 3364851 3364854 3364855 3364856 3364888, overlap 3364854 CGCTCGAAGAGTAAA TCTCTGTGTCGCATCAGG TATTTATCG CCTGATGCGACACGG-GT GTGTCTTTTCAGGCC TERM 4559 3364895 - 3364854 - T 75 -11 -2.95073 | gap 1, opp_overlap 3364851 3364854 3364855 3364856 3364888, overlap 3364853 GCTCGAAGAGTAAAT CTCTGTGTCGCATCAGG TATTTATCG CCTGATGCGACACGG-G TGTGTCTTTTCAGGC TERM 4560 3364854 - 3364897 + T 90 -12.6 -3.40175 | gap 1, opp_overlap 3364854 3364853, overlap 3364851 3364855 3364856 3364888 GCTCGAAGAGTAAAT C-TCTGTGTCGCATCAGGT ATTTATC GCCTGATGCGACACGGGTG TGTCTTTTCAGGCCT TERM 4561 3364855 - 3364895 + T 100 -16.3 -3.26779 | opp_overlap 3364854 3364853, overlap 3364854 3364851 3364856 3364888 CTCGAAGAGTAAATC TCTGTGTCGCATCAGGT ATTTATC GCCTGATGCGACACGGG TGTGTCTTTTCAGGC TERM 4562 3364856 - 3364894 + T 100 -17.6 -2.55585 | opp_overlap 3364854 3364853, overlap 3364855 3364854 3364851 3364888 TCGAAGAGTAAATCT CTGTGTCGCATCAGGT ATTTATC GCCTGATGCGACACGG GTGTGTCTTTTCAGG TERM 4563 3364888 - 3364901 + T 70 -6.7 -4.09685 | opp_overlap 3364854 3364853, overlap 3364856 3364855 3364854 3364851 TTTATCGCCTGATGC GACAC GGGT GTGTC TTTTCAGGCCTACAA yqfA 3365587 - 3364928 - | putative hemolysin, inner membrane subunit TERM 4564 3364992 - 3365009 + g 71 -9.1 -3.50393 | opp_overlap 3364992 3364991 CCGCCGAGCACAAAG CCGTGCC AGAT GGCATGG TTGTATGGGATGCGC yqfB 3366062 - 3365751 - | hypothetical protein bglA 3366101 - 3367540 + | 6-phospho-beta-glucosidase A TERM 4565 3367667 - 3367680 + T 75 -9.5 -3.56092 | opp_overlap 3367667 TTAACAAGCTAAAAA GGCGC CGAA GCGCC TTTAGAAAATAGTCG TERM 4566 3367680 - 3367667 - T 91 -9.5 -4.8143 | opp_overlap 3367667 TTAACAAGCTAAAAA GGCGC CGAA GCGCC TTTAGAAAATAGTCG gcvP 3370579 - 3367706 - | glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex gcvH 3371087 - 3370698 - | glycine cleavage complex lipoylprotein TERM 4567 3371134 - 3371114 - R 70 -8.9 -3.16667 | overlap 3371112 3371111 CAAAAAAGTAAATCA CGCGACGGC TTT GCCGTTACG CACAAAAACAGGTTT gcvT 3372205 - 3371111 - | aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex TERM 4568 3371923 - 3371897 - G 70 -5.2 -4.41241 | overlap 3371901 3371905 GAAATCTTCAGAAAA GTAGTAGACGAT GAG ATCATCTATCAC ACCGCCAGAGGCATT visC 3373855 - 3372653 - | putative oxidoreductase with FAD/NAD(P)-binding domain TERM 4569 3373255 - 3373267 + g 73 -9.1 -3.67775 | opp_overlap 3373243 AAACCTGCCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 3375056 - 3373878 - | 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding pepP 3376378 - 3375053 - | proline aminopeptidase P II TERM 4570 3375779 - 3375806 + g 70 -11.2 -2.71712 | opp_overlap 3375760, overlap 3375778 3375781 CGGACGGCATTTTTC CATCGCCCGGGT ATGC GCCAGGGCGGTG ATTTCACCCGCGCGG TERM 4571 3376311 - 3376297 - G 75 -5.6 -4.72272 | opp_overlap 3376297 3376301, overlap 3376298 3376300 3376301 CTGGTGCAGCAAAAA TCAGCG CGG CGCTGC CGGGTTGCATTTGCT TERM 4572 3376310 - 3376298 - G 71 -9.1 -3.43042 | opp_overlap 3376297 3376301, overlap 3376297 3376300 3376301 TGGTGCAGCAAAAAT CAGCG CGG CGCTG CCGGGTTGCATTTGC ygfB 3376982 - 3376404 - | hypothetical protein TERM 4573 3377376 - 3377357 - g 77 -3.4 -5.08601 | overlap 3377364 TTAGCGCAAGAAAAA GCGAAGAC TCGT GACTACGC GGCAAGTATGGAACA zapA 3377150 - 3377479 + | protein that localizes to the cytokinetic ring TERM 4574 3378150 - 3378173 + G 74 -3 -4.91109 | overlap 3378151 3378154 CTTTGATGAGTACGG TCAGCGCCTG GGAA TGGGCGGTGG TTTTTATGATCGAAC ygfA 3377779 - 3378327 + | putative ligase TERM 4575 3378504 - 3378523 + T 87 -11.4 -3.66178 | overlap 3378520 ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 4576 3378668 - 3378698 + T 74 -8.2 -4.07568 | opp_overlap 3378672, overlap 3378672 TGGAGAAGGGATAAA AAAACGGGCAAGTC AGT GACCTGCCCGTTGA TTTTCAGAGAAGGGG TERM 4577 3378694 - 3378672 - T 100 -15.6 -5.66684 | opp_overlap 3378668 3378672 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTGATTTTCAGAGAA TERM 4578 3378672 - 3378694 + T 100 -13.4 -3.66908 | opp_overlap 3378672, overlap 3378668 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTGATTTTCAGAGAA serA 3379948 - 3378716 - | D-3-phosphoglycerate dehydrogenase TERM 4579 3379380 - 3379393 + g 72 -4.5 -4.70515 | overlap 3379379 3379381 TGTACCTGAGTGGCG TTGCC CAGC GGCAG TTTGTTTTCAATATC TERM 4580 3380033 - 3380015 - R 77 -3.2 -5.27399 | overlap 3380018 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCAA TERM 4581 3380030 - 3380018 - R 73 -4.9 -4.69962 | overlap 3380015 CATATCAAAAAATAA TATTG CGG CAATA TGAACGTTTGCGTCG TERM 4582 3380177 - 3380203 + r 78 -11.6 -2.91873 | opp_overlap 3380170 3380168, overlap 3380174 AATGAAGAGAATTTT TTTAACGGGGGA GGT TCCCCCGTCAGA TCATTTCACAATGGT rpiA 3380863 - 3380204 - | ribose 5-phosphate isomerase, constitutive TERM 4583 3380290 - 3380312 + g 72 -7 -4.20531 | AGCCAACAGTCACCA CGCCAGGAAT CGC ATTTATGGCG TTTTCCATCGCTATC ECUMN_3256 3381815 - 3380919 - | hypothetical protein ECUMN_3257 3381916 - 3382545 + | FMN-dependent NADH-azoreductase ECUMN_3258 3382562 - 3382822 + | conserved hypothetical protein; putative exported protein ECUMN_3259 3382884 - 3384209 + | putative Flavodoxin oxidoreductase TERM 4584 3384498 - 3384475 - g 72 -4.4 -4.70626 | overlap 3384477 GAACAAGGGCAAAAA CTGCTGGCAC TGCT GCGCCAGGTG GAGTTGCTGGAAGAA argP 3384280 - 3385173 + | DNA-binding transcriptional activator, replication initiation inhibitor TERM 4585 3385211 - 3385183 - f 77 -9 -3.80114 | opp_overlap 3385186 3385187, overlap 3385186 3385187 GATTAATCCATCAAA TAATGCCTGATA GCACA TATCAGGCGTTA TCCGCACGTCTTTTT TERM 4586 3385207 - 3385187 - f 71 -9.8 -3.0082 | opp_overlap 3385187 3385186, overlap 3385186 3385183 AATCCATCAAATAAT GCCTGATA GCACA TATCAGGC GTTATCCGCACGTCT TERM 4587 3385850 - 3385871 + G 74 -5.9 -4.57353 | gap 1, overlap 3385849 GATGACCATGAATGG CG-CAGTGCT ACC AGTACTGGCG TTTTATATCGTCGCC TERM 4588 3386247 - 3386257 + G 70 -6.8 -4.06419 | AACGTCGCCATGTTG CGTG CGG CACG TTATTTATGGAGCGA yliK 3385377 - 3387521 + | methylmalonyl-CoA mutase TERM 4589 3387852 - 3387864 + G 72 -6.9 -4.1552 | opp_overlap 3387843, overlap 3387853 GAATGACCTGGCGCG TGCCG AGG CGGCG TTTATTCGCCCGGTA argK 3387514 - 3388509 + | membrane ATPase/protein kinase ygfG 3388520 - 3389305 + | methylmalonyl-CoA decarboxylase, biotin-independent ygfH 3389329 - 3390807 + | propionyl-CoA:succinate-CoA transferase ygfI 3391700 - 3390804 - | putative DNA-binding transcriptional regulator TERM 4590 3391593 - 3391618 + g 84 -3.9 -5.24129 | opp_overlap 3391599, overlap 3391594 CGCGGCAATGCTTTT ACCAAATGGCG AAGC CGTCATATGGA TTTTTTCTGCCGCCC TERM 4591 3391862 - 3391837 - R 84 -13.3 -2.64472 | opp_overlap 3391836 3391835, overlap 3391824 3391834 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAATATTATTGTGCT yggE 3392608 - 3391868 - | hypothetical protein argO 3393336 - 3392701 - | arginine transporter TERM 4592 3393899 - 3393913 + G 76 -4.2 -4.96848 | overlap 3393901 TTACAGTTTTTCCTT GGCTAC CCG GTAGGC TTTTTCTCTACCAGG ECUMN_3268 3393452 - 3394495 + | hypothetical protein; putative exported protein TERM 4593 3394505 - 3394527 + T 100 -17.8 -3.71527 | opp_overlap 3394498 3394497 3394488 CGTTAAATTGGTAGT GCGCCCATGA ACT TCATGGGCGC TTTACATGATTAACG mscS 3395412 - 3394537 - | mechanosensitive channel TERM 4594 3395577 - 3395561 - R 93 -9.3 -5.00616 | overlap 3395562 CTTTTGGCGAAAAAA TCCCCGC AGA GCGGGGC TCAGACAGATATCAA TERM 4595 3395576 - 3395562 - R 95 -12.8 -3.60048 | overlap 3395561 TTTTGGCGAAAAAAT CCCCGC AGA GCGGGG CTCAGACAGATATCA TERM 4596 3395745 - 3395729 - R 100 -11.5 -5.86061 | TTTTAGCAAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fbaA 3396849 - 3395770 - | fructose-bisphosphate aldolase, class II TERM 4597 3397028 - 3397008 - R 77 -3.1 -5.20216 | overlap 3397009 TAGAGTATGAAAAAA TGCGTGCTC TAA AAGCGCGCT GAAACAAGGGCAGGT TERM 4598 3397032 - 3397058 + r 95 -7.3 -5.37865 | gap 1, opp_overlap 3397036, overlap 3397033 3397036 TAAAAGCGCGCTGAA ACA-AGGGCAGG TTTC CCTGCCCTGTGA TTTTTTACTTCTTAG TERM 4599 3397033 - 3397057 + r 85 -10.8 -3.81092 | gap 1, opp_overlap 3397036, overlap 3397032 3397036 AAAAGCGCGCTGAAA CA-AGGGCAGG TTTC CCTGCCCTGTG ATTTTTTACTTCTTA TERM 4600 3397036 - 3397053 + r 90 -12.7 -3.27687 | opp_overlap 3397036, overlap 3397033 3397032 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT TERM 4601 3397053 - 3397036 - R 100 -12.7 -3.90922 | opp_overlap 3397033 3397032 3397036 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT pgk 3398226 - 3397063 - | phosphoglycerate kinase epd 3399295 - 3398276 - | D-erythrose 4-phosphate dehydrogenase TERM 4602 3399373 - 3399387 + H 72 -10 -2.87756 | opp_overlap 3399365 3399366, overlap 3399370 GGGGAAACCTTACCT GTCGCA AAC TGCGAC TGATTGGTTAATTGT TERM 4603 3399796 - 3399775 - gH 71 -8.1 -3.71848 | gap 1, opp_overlap 3399785, overlap 3399778 3399779 TTCGCGCAGCAACAA CAACTCCACG CTG CGTGGA-TTG CAGGTTGTACCGGCA TERM 4604 3399793 - 3399779 - gH 73 -10 -2.99142 | opp_overlap 3399785, overlap 3399778 3399775 CGCAGCAACAACAAC TCCACG CTG CGTGGA TTGCAGGTTGTACCG ECUMN_3273 3399667 - 3400098 + | conserved hypothetical protein with PD1-like DNA-binding motif ECUMN_3274 3400022 - 3400699 + | putative ABC-type transport system ECUMN_3275 3400700 - 3401407 + | putative ABC-type transport system TERM 4605 3401481 - 3401493 + GF 71 -7.7 -3.72576 | overlap 3401478 CTATGTCAAATCGGG GATGG TCG CCATC TTTGGTGACAACGGC TERM 4606 3401835 - 3401821 - gf 73 -10 -3.03124 | CGTCACCCGGCAACA CTCTCC GGT GGAGAG ACACAGCGCGTGGTC ECUMN_3276 3401389 - 3402072 + | putative ATP-binding protein of ABC transport system TERM 4607 3402647 - 3402670 + GT 81 -9.6 -4.053 | opp_overlap 3402643 CATAGCAATCAGTCA TGACGCCG CATTTACC CGGCGTCA TTTCTCTCGGGTGGT ECUMN_3277 3402033 - 3402743 + | putative ATP-binding protein of ABC transport system yggC 3403428 - 3402715 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4608 3403077 - 3403087 + g 70 -6.8 -4.10453 | overlap 3403078 AATCCCCTTCCACGA CCTG GCG CAGG TTTTCCGCCAGTTTC yggD 3403934 - 3403425 - | putative DNA-binding transcriptional regulator yggF 3404921 - 3403956 - | putative hexoseP phosphatase TERM 4609 3404792 - 3404830 + g 82 -2.5 -5.35224 | overlap 3404800 3404811 GAAAAGCGACGTCGT TTAATG-CCTGGCGCATCG CGG TGAC-CGCCAGGCCATCAA TTTTATTTTTGTCGC TERM 4610 3404863 - 3404882 + g 87 -13.6 -3.05384 | overlap 3404865 CATCCGGTTTGCGGC CAGGCAGC CAAC GCTGCCTG TTCCGTAACGCGAAA yggP 3406195 - 3404918 - | putative dehydrogenase cmtA 3407598 - 3406210 - | fused mannitol-specific PTS enzymes: IIB component ; IIC component cmtB 3408069 - 3407626 - | putative mannitol-specific enzyme IIA component of PTS TERM 4611 3408220 - 3408237 + H 80 -7.1 -4.54553 | opp_overlap 3408220 3408219 3408222 CATGAAATCAATAAT TACAAAG TCAA CTTTGTA TTTGTTATGTTTATC TERM 4612 3408311 - 3408328 + H 73 -2.7 -5.15634 | opp_overlap 3408314, overlap 3408314 CGCCATTTATTTATT GAATGTT CGAA AACATAC TTTTTTAATGCAATG TERM 4613 3408665 - 3408645 - g 77 -9.7 -3.64703 | TCCCTTTTATGGAAA GCGTGGAGA AAA TTTCCACGC GTAATCAGGCTGTGG TERM 4614 3409021 - 3409007 - g 72 -4.3 -4.72986 | GACGCTTATGAAAAA TCGAT TGAAG ATCGA ATGAAAGCAGAAGTC TERM 4615 3409071 - 3409060 - g 70 -4.4 -4.44548 | CACACGTAAGCAAAA TCTG GAAA CAGA GAAAATCCAGGCGCA ECUMN_3284 3408410 - 3409354 + | putative membrane protease TERM 4616 3409377 - 3409360 - T 100 -14.1 -5.65513 | TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTGAAACTGATGGCA TERM 4617 3409557 - 3409528 - T 100 -16.5 -3.62046 | GCACTTTGCCAATAA TCTGAAGGGCCGC TTTC GCGGCCCTTGAGA CTGATGGCAAAGGCA TERM 4618 3409731 - 3409702 - T 89 -12.1 -3.62046 | opp_overlap 3409708 GCACTTTGCCAATAA TCTGAAGGGCCGC TTTC GCGGCCCTTCTCA CAAAGCATCTTACCG TERM 4619 3409708 - 3409725 + T 100 -14.1 -3.28924 | opp_overlap 3409702 TGCCAATAATCTGAA GGGCCGC TTTC GCGGCCC TTCTCACAAAGCATC tktA 3411739 - 3409748 - | transketolase 1, thiamin-binding TERM 4620 3411434 - 3411450 + g 83 -10.1 -4.13945 | opp_overlap 3411433, overlap 3411435 AGCGGTGTAACCTAC TTCCGGG TGG CCCGGAG TTTTAGAGTGCAGCT TERM 4621 3411435 - 3411449 + g 75 -11.4 -3.08046 | opp_overlap 3411433, overlap 3411434 GCGGTGTAACCTACT TCCGGG TGG CCCGGA GTTTTAGAGTGCAGC yggG 3412017 - 3412775 + | putative peptidase TERM 4622 3412783 - 3412808 + T 100 -14.9 -4.4078 | opp_overlap 3412773 3412772 TTAAGTGATTTCATA TTTCTCCGACA GGAA TGTCGGAGAAA TTTTCATTCAGGGCC ECUMN_3287 3414423 - 3412861 - | conserved hypothetical protein; putative exported protein TERM 4623 3414322 - 3414338 + g 83 -6.5 -5.02287 | GGCCTCTTTGTCTTG TTGCAGC TGT GCGGCAA TTTTCTGTTTTTCTG TERM 4624 3414543 - 3414521 - R 89 -12.1 -3.60151 | GGTTTTAAATGATAA GTCCCTTGT GCCAG ACAAGGGAC TGTGCAAAAAATTCA speB 3415493 - 3414573 - | agmatinase TERM 4625 3415126 - 3415116 - G 72 -6.8 -4.1822 | CGGCAGCGTAACAAA GTGG TCA CCAC CGAAGGAGAGCATAC TERM 4626 3415453 - 3415441 - G 77 -3.4 -5.03314 | opp_overlap 3415450 GGCAGGCGTAAAAAA CCAA AGGCG TTGG AAACCAGTGAGTTAT TERM 4627 3415529 - 3415561 + r 95 -14.9 -3.27525 | opp_overlap 3415529, overlap 3415524 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC TERM 4628 3415561 - 3415529 - R 100 -14.9 -5.71712 | opp_overlap 3415524 3415529 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC ECUMN_3289 3416360 - 3415629 - | conserved hypothetical protein; putative exported protein TERM 4629 3416492 - 3416453 - R 87 -7.8 -5.1383 | overlap 3416457 3416484 AAGAATATATAAAAA GAAAGCGGGCCGATTTAC GTAA ATAAACCGACCCGCCAGC GGAATAATCTTAATT TERM 4630 3416488 - 3416457 - R 100 -13.8 -5.02777 | overlap 3416453 3416484 ATATATAAAAAGAAA GCGGGCCGATTTAC GTAA ATAAACCGACCCGC CAGCGGAATAATCTT speA 3418482 - 3416506 - | biosynthetic arginine decarboxylase, PLP-binding TERM 4631 3416811 - 3416801 - G 72 -6.8 -4.2704 | CCGACCATGAAGAAA CCGA GCA TCGG CGGATTCTCTGGATC yqgB 3418637 - 3418491 - | hypothetical protein TERM 4632 3418699 - 3418682 - H 87 -8.5 -4.52703 | opp_overlap 3418672 3418694, overlap 3418672 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC TERM 4633 3418938 - 3418962 + G 79 -2.2 -5.27335 | gap 1, overlap 3418942 ACCCGGCTGGAAGTG GCAACACGA AAGAAACG TCGTGT-GC TTTTTATTTAAGCCG yqgC 3418758 - 3418973 + | hypothetical protein TERM 4634 3418976 - 3418986 + T 79 -8.2 -4.36914 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA yqgD 3419221 - 3418970 - | conserved hypothetical protein; putative inner membrane protein TERM 4635 3419753 - 3419741 - g 91 -9.1 -4.59853 | TGAAGTGCGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 4636 3420352 - 3420340 - g 72 -5.5 -4.57482 | opp_overlap 3420340 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGCGA TERM 4637 3420417 - 3420388 - g 74 -2.7 -5.00616 | gap 1, overlap 3420396 TCCCGTGGGAAAAAA CCGACAAAGCGCAG CTG CTGCGCGATG-CTG CCGGTCTGAAGTAAT TERM 4638 3420410 - 3420396 - g 91 -11.4 -4.11869 | overlap 3420388 GAAAAAACCGACAAA GCGCAG CTG CTGCGC GATGCTGCCGGTCTG metK 3419277 - 3420431 + | methionine adenosyltransferase 1 TERM 4639 3420454 - 3420472 + F 100 -11.7 -5.48213 | opp_overlap 3420454 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4640 3420472 - 3420454 - f 88 -11.7 -3.53444 | opp_overlap 3420454 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4641 3420787 - 3420806 + F 78 -6.5 -4.68994 | overlap 3420767 GTAAGCGATTACACT GATGTGA TTTGCT TCACATC TTTTTACGTCGTACT galP 3420868 - 3422262 + | D-galactose transporter sprT 3422339 - 3422836 + | hypothetical protein TERM 4642 3423169 - 3423155 - g 71 -2.7 -4.77757 | overlap 3423156 GCGCAAAAATGAAAA CCGCG CCAGC CGCGT AGAGTGGGAACACGT TERM 4643 3423427 - 3423411 - g 87 -4.3 -5.28942 | opp_overlap 3423426, overlap 3423423 GATTTCAAAGAAAAA GCTGCCG AAC CACCAGC GCGTGCACGCGGTGC endA 3422931 - 3423638 + | DNA-specific endonuclease I TERM 4644 3423686 - 3423708 + F 71 -4.7 -4.71061 | opp_overlap 3423687, overlap 3423687 TACCCCACGCGAACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT yggJ 3423718 - 3424449 + | hypothetical protein TERM 4645 3425351 - 3425371 + G 74 -11.2 -3.1552 | opp_overlap 3425349, overlap 3425349 AGATTGAAGCAGAGT TTCCGGTG TCGAT CACCGGAA TGTTAATGGATGCCA gshB 3424462 - 3425412 + | glutathione synthetase yqgE 3425521 - 3426084 + | hypothetical protein TERM 4646 3426455 - 3426438 - g 76 -7.7 -4.15044 | opp_overlap 3426451 CGGGCGCTCAACAAA GGCAAAG TTGA CTCTGCC TCTGCGGTTATCATT yqgF 3426084 - 3426500 + | Holliday junction resolvase yggR 3427595 - 3426615 - | transporter TERM 4647 3427662 - 3427683 + G 83 -12.3 -3.28791 | GGGACAAAATCTCAG CGGCTGCAA CGCG TTGCGGCCG TTCTCCAGAAGAAAT TERM 4648 3427893 - 3427881 - g 72 -4.7 -4.65916 | opp_overlap 3427884, overlap 3427848 3427882 TGCAGTCTAATAAAA GCCGC CTG GTGGC AGAGCATTTCGACTG yggS 3427613 - 3428317 + | putative enzyme yggT 3428335 - 3428901 + | conserved hypothetical protein; putative inner membrane protein TERM 4649 3429123 - 3429108 - g 70 -3.9 -4.65895 | GTGGTGATTGAAAAA GGCGA ACTTGG CCGCC ACAAACAAATTAAAA yggU 3428898 - 3429188 + | hypothetical protein TERM 4650 3429432 - 3429455 + G 77 -10.2 -3.65046 | overlap 3429424 AGATGCGCTGGGTGG CGCGCCGGGT ATTT ACTCCGCGCG TTATTCCGGTGAAGA yggV 3429196 - 3429789 + | dITP/XTP pyrophosphatase TERM 4651 3430644 - 3430632 - g 72 -6.2 -4.30576 | opp_overlap 3430630 3430632 TGCGTACCACCAAAA CGCG TCATC CGCG TGGTTTTATGCAGGG yggW 3429782 - 3430918 + | putative oxidoreductase TERM 4652 3430918 - 3430949 + F 80 -8.8 -4.17048 | opp_overlap 3430919 3430922 3430926, overlap 3430919 3430922 3430926 ATTCCTCGCTGAGTA ATCATTAATGCGCC TGCG GGCGCATTAATCAC TTCTTTTACCCCCCG TERM 4653 3430919 - 3430948 + F 83 -12.3 -3.09908 | opp_overlap 3430919 3430922 3430926, overlap 3430918 3430922 3430926 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTACCCCCC TERM 4654 3430948 - 3430919 - f 86 -12.3 -3.14132 | opp_overlap 3430918 3430919 3430922 3430926, overlap 3430922 3430926 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTACCCCCC TERM 4655 3430945 - 3430922 - f 86 -14 -2.77899 | opp_overlap 3430919 3430918 3430922 3430926, overlap 3430919 3430926 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTACCC TERM 4656 3430922 - 3430945 + F 86 -14 -2.75865 | opp_overlap 3430922 3430919 3430926, overlap 3430919 3430918 3430926 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTACCC TERM 4657 3430926 - 3430941 + F 74 -10.4 -3.26842 | opp_overlap 3430922 3430919 3430926, overlap 3430922 3430919 3430918 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT TERM 4658 3430941 - 3430926 - f 76 -10.4 -3.29096 | opp_overlap 3430926 3430922 3430919 3430918, overlap 3430922 3430919 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT ECUMN_3308 3431231 - 3432217 + | Putative c4-dicarboxylate transport system binding protein TERM 4659 3432222 - 3432243 + F 86 -10.9 -4.10429 | gap 1, opp_overlap 3432221 3432220, overlap 3432224 CTGCTCAATAATATT TC-GGGCCAG TCT CTGGCCCTGA TTTTCCAGGATGCTT TERM 4660 3432224 - 3432240 + F 87 -13.7 -3.08508 | opp_overlap 3432221 3432220, overlap 3432222 GCTCAATAATATTTC GGGCCAG TCT CTGGCCC TGATTTTCCAGGATG TERM 4661 3432295 - 3432309 + G 77 -7 -4.53303 | overlap 3432285 3432300 AAACTTGCGGTAGAC CGCGTC ATT GCCGCG TTTTCTGTCGCCGTA ECUMN_3309 3432253 - 3432765 + | putative TRAP-type C4-dicarboxylate transport system, small permease component TERM 4662 3433117 - 3433131 + G 77 -11.4 -3.14564 | CTGGTTCAGCCGTTG CGGCAG CTG CTGCCG TTGGTGGCACACTGA TERM 4663 3433404 - 3433390 - g 74 -8.6 -3.87994 | ACCCACTTTCAGAAA GAGCAA CCT TTGCTC AAGCATGTAAAGCGT ygiK 3432765 - 3434066 + | c4-dicarboxylate permease TERM 4664 3434110 - 3434071 - T 73 -3 -5.15969 | gap 1, overlap 3434074 GGCTAATGTAAAAAA TA-ATTTGCCGGATAACTT TTT ATATTATCCGGCAAAGGCA CTTAACATGAGTTAC TERM 4665 3434106 - 3434074 - T 100 -12.9 -4.67173 | overlap 3434071 TAATGTAAAAAATAA TTTGCCGGATAACTT TTT ATATTATCCGGCAAA GGCACTTAACATGAG yggM 3435129 - 3434122 - | hypothetical protein TERM 4666 3435007 - 3435019 + g 71 -3.3 -4.76892 | opp_overlap 3435007 ATCAAGCTTGAGAAT GCCGT GAT ACTGC TTTTTGAATTGATCT TERM 4667 3435238 - 3435218 - R 100 -14.7 -4.74103 | opp_overlap 3435219 GTCTGAAGTGAAAAA GCCCCGGCA CGA TACCGGGGC GAGGTGATTAGTACT ansB 3436292 - 3435246 - | periplasmic L-asparaginase II TERM 4668 3435595 - 3435581 - G 83 -10 -4.09117 | opp_overlap 3435561 3435581 3435580 CGTAGTTATAAACAA TGCCGA CTT TCGGCA GTTCATTCAGCTTAG TERM 4669 3436452 - 3436430 - R 80 -9.2 -4.12315 | opp_overlap 3436430 AAACGAAGAATTAAA CGGCATAAAA AAG TATTATGCCG TCTTAAAATAGAGGA yggN 3437187 - 3436468 - | conserved hypothetical protein; periplasmic protein TERM 4670 3436545 - 3436564 + g 71 -2.8 -4.75776 | overlap 3436535 3436548 CATCTTTGCCAAACT GTTGGAAA TCTT TTTCCTGC TTTTTCCATTCGCTT TERM 4671 3437116 - 3437094 - G 73 -12 -2.82623 | overlap 3437091 3437096 GCGGGCTGACAATCA CATCGTCACG CGG CGTGACGCTG CACTGGTAGTCGGCG TERM 4672 3437158 - 3437174 + g 74 -8 -4.12188 | opp_overlap 3437157 3437158 TGCCGTCACTGAAAG TGCTGC CGCCA GCAGCA TTTTGCGCATCATAG TERM 4673 3437231 - 3437208 - R 87 -8.8 -4.44667 | overlap 3437211 TCCCTCAAGAACAAA TCAGGCCAGC ATTT GCTGGCCCCA GATTGATAACAAAGT TERM 4674 3437228 - 3437211 - R 86 -12.7 -3.19055 | overlap 3437208 CTCAAGAACAAATCA GGCCAGC ATTT GCTGGCC CCAGATTGATAACAA yggL 3437697 - 3437371 - | hypothetical protein yggH 3438416 - 3437697 - | tRNA (m7G46) methyltransferase, SAM-dependent TERM 4675 3439405 - 3439382 - g 70 -6 -4.24342 | gap 1, opp_overlap 3439395 3439396, overlap 3439383 TTGCCGATGAAGAAA GTTTGCGGCAG TGG CTGGCGCA-AC GACAGATTTCTGCCG mutY 3438577 - 3439629 + | adenine DNA glycosylase TERM 4676 3439839 - 3439819 - g 73 -4 -4.78981 | overlap 3439833 ATTAATGAAAAGAAA CTCAACAT GATGA ATGCCGAG CACCGCAAGCTGCTT yggX 3439657 - 3439932 + | protein that protects iron-sulfur proteins against oxidative damage TERM 4677 3439963 - 3439936 - f 100 -6.3 -5.8096 | gap 1, opp_overlap 3439938, overlap 3439938 3439939 GATAAAAAATAAAAA CAGT-GCCGGAG CACGC CTCCGGCAACTT GCATAAAAACAAACA TERM 4678 3439960 - 3439938 - f 88 -9.1 -4.48934 | opp_overlap 3439938, overlap 3439936 3439939 TAAAAAATAAAAACA GTGCCGGAG CACGC CTCCGGCAA CTTGCATAAAAACAA TERM 4679 3439959 - 3439939 - f 86 -12.6 -3.257 | opp_overlap 3439938, overlap 3439938 3439936 AAAAAATAAAAACAG TGCCGGAG CACGC CTCCGGCA ACTTGCATAAAAACA mltC 3439997 - 3441076 + | membrane-bound lytic murein transglycosylase C nupG 3441278 - 3442534 + | nucleoside transporter TERM 4680 3442539 - 3442582 + T 100 -14 -3.34013 | opp_overlap 3442550, overlap 3442550 TTAGCCACTAATTAC GCAAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTATTC TTACTTCAACACATA TERM 4681 3442550 - 3442571 + T 100 -13.7 -5.95946 | opp_overlap 3442550, overlap 3442539 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC TERM 4682 3442571 - 3442550 - T 100 -11.5 -5.30616 | opp_overlap 3442550 3442539 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC speC 3444718 - 3442583 - | ornithine decarboxylase, constitutive TERM 4683 3442892 - 3442903 + g 76 -3.6 -4.92363 | CGGGAAACTCTGCTG GCGG AACA TCGC TTTTTGTAGGTCTTT TERM 4684 3443623 - 3443610 - G 72 -5.2 -4.57569 | opp_overlap 3443596 TTATGCGGGCAAAAA CGCG CCTGCC CGCG AATATGGTTATCTTT TERM 4685 3444311 - 3444326 + g 77 -6.8 -4.56597 | opp_overlap 3444311 GAAATCGTAAAAATG GCGTCC GGCA GGATGC TTTTTAAAGAACGCA TERM 4686 3444560 - 3444539 - G 90 -7.3 -5.0916 | overlap 3444556 TTCGGAATACAAAAA CACCGGT AGATGAAA ACCGGTG CGCTTAAGCAACGCA TERM 4687 3444739 - 3444729 - H 76 -8.2 -4.21936 | TTCATAAGCGCAAAA CCCG TTT CGGG GAAGTAAGAATACCG TERM 4688 3444823 - 3444853 + H 74 -9.9 -3.41602 | opp_overlap 3444822 3444825 3444832 CCGACCGCCAGACAT CAGTAAAAGCAGA AACGC TCTGATTTTACTG TTGTCCTGCAGTGAG yqgA 3445111 - 3445818 + | conserved hypothetical protein; putative inner membrane protein TERM 4689 3445966 - 3445950 - f 74 -10.9 -2.62616 | opp_overlap 3445949 3445948 3445945 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4690 3446012 - 3446031 + F 100 -13.6 -4.98531 | opp_overlap 3446012 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 4691 3446031 - 3446012 - f 100 -13.6 -3.31196 | opp_overlap 3446012 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 4692 3446411 - 3446398 - g 70 -5.2 -4.386 | GAAGCTCGTACAAAA CGGG ATGAGG CCCG AAAACTGATTTCGGA ECUMN_3322 3446197 - 3447462 + | integrase TERM 4693 3447508 - 3447483 - f 81 -11.9 -3.0094 | CGCCATTTACACACA TGCTCTTCCTC TTAA GGGGAAGAGCA CCCGCCTCAATCAAT TERM 4694 3447542 - 3447565 + F 71 -10.4 -2.75712 | gap 1, opp_overlap 3447548, overlap 3447546 3447558 TTTTTTATGCCGGCG GAACCATCAGC CAG GCTGA-GGTTC TCATTCAATAACTCA ECUMN_3323 3447688 - 3448761 + | putative homolog to shiA (SHI-2 pathogenicity island of Shigella flexneri) TERM 4695 3448832 - 3448854 + F 83 -12 -3.2006 | overlap 3448831 3448833 CTGTTAATGCCCCCT TCCCCTGGTT GTC AGCCAGGGGG TATCTTCTGAATATT TERM 4696 3448833 - 3448853 + F 84 -13.3 -2.51313 | overlap 3448832 3448831 TGTTAATGCCCCCTT CCCCTGGTT GTC AGCCAGGGG GTATCTTCTGAATAT ECUMN_3326 3450184 - 3450588 + | Conserved hypothetical protein, putative transposase ECUMN_3327 3450585 - 3450932 + | conserved hypothetical protein, putative transposase ORF2, IS66 family TERM 4697 3451325 - 3451314 - T 82 -7.2 -4.72272 | overlap 3451315 3451316 CCCCGCGATGAAAAA CGGC TGCT GCCG GCAGCGTCATGCTGC TERM 4698 3451799 - 3451835 + T 72 -9.4 -3.17075 | gap 1, opp_overlap 3451766 CTACGTTCGTGACGA CCGTAACGCCGG-GTCA ACGC TGGCGCCGGCGGTGTGG TTCGCTTACAGCCCG ECUMN_3330 3453420 - 3452869 - | Putative HTH-type transcriptional regulator papG 3454693 - 3453683 - | Fimbrial PapG protein (P pilus class II adhesin) (PapGII) TERM 4699 3454082 - 3454095 + g 70 -6.7 -4.10007 | GAATAACATTTCATT CTCTC TTGG GAGAG TTTTGGCCACATTGT papF 3455267 - 3454737 - | Fimbrial adapter PapF precursor prsE 3455857 - 3455312 - | Fimbrial protein precursor papK 3456405 - 3455866 - | Fimbrial adapter PapK precursor TERM 4700 3456240 - 3456254 + g 70 -7 -4.07687 | opp_overlap 3456239 3456240 GCGGATACCAGAAAT CCCTGG ACG CCCGGG TTTTGAAGACGACAT papJ 3456993 - 3456412 - | Protein PapJ precursor, P pilus assembly TERM 4701 3456581 - 3456547 - G 75 -5 -4.8048 | overlap 3456551 CCGGCACAGTAAAAA GGTATCACCATCGTGT ATA ACAAGATGGTCACAGC CGGATAGCTTACGGT papD 3457764 - 3457030 - | Chaperone protein PapD precursor TERM 4702 3457444 - 3457432 - G 77 -3.3 -5.16132 | GAGATTAAAATAAAA CAGTG ATT CCCTG TCCTGAGGAAGTTTA papC 3460366 - 3457835 - | Outer membrane usher protein PapC precursor TERM 4703 3460321 - 3460290 - G 71 -9.6 -3.48115 | opp_overlap 3460295, overlap 3460288 3460286 3460292 GCGTTACAAAACAGA GACAACAATATCAC ACAG GTAATATTGTTGAC TGCAAAAGGTATTCT TERM 4704 3460319 - 3460292 - G 76 -10.8 -3.30825 | opp_overlap 3460295, overlap 3460290 3460288 3460286 GTTACAAAACAGAGA CAACAATATCAC ACAG GTAATATTGTTG ACTGCAAAAGGTATT papH 3460991 - 3460404 - | minor pilin protein PapH TERM 4705 3461036 - 3461010 - R 100 -16.8 -3.89903 | opp_overlap 3461014, overlap 3461014 AAATACCCTGAGAAA TAAACAGCGGAA TAT TTCCGCTGTTTA CCGGACCAGATTATC TERM 4706 3461014 - 3461032 + r 100 -13.2 -3.53091 | opp_overlap 3461010 3461014 ACCCTGAGAAATAAA CAGCGGAA TAT TTCCGCTG TTTACCGGACCAGAT TERM 4707 3461032 - 3461014 - R 100 -13.2 -4.55697 | opp_overlap 3461014, overlap 3461010 ACCCTGAGAAATAAA CAGCGGAA TAT TTCCGCTG TTTACCGGACCAGAT papA 3461597 - 3461061 - | P-fimbriae major subunit precursor papB 3462118 - 3461804 - | pap operon regulatory protein PapB TERM 4708 3462392 - 3462382 - H 72 -5.4 -4.49716 | overlap 3462384 AAATAAAACGCAAAA TGTG ATA CACA TCAAATAAATCCAAT papI 3462523 - 3462756 + | pap operon regulatory protein PapI TERM 4709 3463556 - 3463571 + T 74 -5.4 -4.67123 | AGTCGCCTGTACTCC CTGTTG ATGC CAGCAG TTTTGCTTCTTTTAA ECUMN_3344 3464532 - 3464206 - | transposase ORF A, IS629 ECUMN_3345 3464981 - 3464805 - | hypothetical protein ECUMN_3346 3466010 - 3465378 - | putative transposase (fragment) TERM 4710 3466087 - 3466075 - H 71 -4.7 -4.59773 | overlap 3466047 3466046 TGTCACCGTGAAAAA CGACG GTG CGACG GCAAAAGCCAATAAC TERM 4711 3466159 - 3466177 + H 82 -7.4 -4.65916 | TCTTAGAACGTAGAG GCCTGG ATTGCTG CCAGGC TTTTATTGCACTACC ECUMN_3347 3466562 - 3466822 + | conserved hypothetical protein; putative exported protein ECUMN_3348 3466864 - 3467424 + | conserved hypothetical protein, putative transcriptional regulator ECUMN_3349 3467434 - 3467892 + | hypothetical protein ECUMN_3350 3468448 - 3468176 - | Neurotensin receptor R8 ECUMN_3351 3468660 - 3468445 - | hypothetical protein ECUMN_3352 3469047 - 3468664 - | hypothetical protein ECUMN_3353 3469235 - 3469044 - | hypothetical protein ECUMN_3354 3469643 - 3469323 - | hypothetical protein ECUMN_3355 3470193 - 3469969 - | hypothetical protein TERM 4712 3470129 - 3470115 - G 85 -11.4 -3.58269 | opp_overlap 3470108 GAATCGAGCCGGAAA CGTGGC TAC GCCACG TGATCAGTGTAATCA TERM 4713 3470395 - 3470355 - R 78 -11.1 -3.19371 | opp_overlap 3470355 ATGCACTTAACCTAA TACGTTGCCACTGTTCCGC CAG GAGTTGCAGTGGCAACGTA TTCTACCGTCAGTGA TERM 4714 3470355 - 3470395 + r 95 -13.3 -3.33492 | opp_overlap 3470355 ATGCACTTAACCTAA TACGTTGCCACTGTTCCGC CAG GAGTTGCAGTGGCAACGTA TTCTACCGTCAGTGA ECUMN_3356 3472517 - 3470427 - | putative Iha adhesin ( receptor) TERM 4715 3472390 - 3472404 + g 74 -2.8 -4.91109 | ACAGAAACACTGGCG GCTG CGTTAGT CAGC TTTTTCTCATAGCCG insD 3473922 - 3473017 - | IS2 insertion element transposase InsAB'; CP4-44 prophage insC 3474289 - 3473915 - | IS2 insertion element repressor InsA; KpLE2 phage-like element ECUMN_3360 3474461 - 3474619 + | Transposase ORF A (fragment), IS3 family TERM 4716 3474594 - 3474625 + F 74 -7.5 -4.258 | gap 2 AAAAGCAGGTGCGTG TAAGCGTC-A-ACGG AGCA CCGTATTGACGCTTA TTTATTAGTGAGTAC ECUMN_3362 3474872 - 3476005 + | transposase, IS110 family TERM 4717 3476192 - 3476224 + T 74 -5.5 -4.67904 | opp_overlap 3476199 3476203 GGTTCTTTAATCCGC GATATAACGAAGCTC CCG GAGCTGCGTAAGGTC TTTTTGGGCTTAATA TERM 4718 3476217 - 3476199 - T 71 -8.8 -3.494 | opp_overlap 3476192, overlap 3476203 TAATCCGCGATATAA CGAAGCTC CCG GAGCTGCG TAAGGTCTTTTTGGG TERM 4719 3477625 - 3477643 + T 72 -8.8 -3.57144 | TGACGGAGGGCTTCA GCCTGCTC AGA GAGCAGCC TTTCCAGCTCAGCGA TERM 4720 3477679 - 3477709 + T 84 -6.8 -5.03145 | ATGAGGTATTTCTGA CTCATGGCCGTTTT TAT AATGCGGTCAGGAG TTTTTTACAACATTG ECUMN_3364 3478064 - 3477714 - | conserved hypothetical protein, putative transposase ORF2, IS66 family ECUMN_3365 3478498 - 3478061 - | conserved hypothetical protein, putative transposase TERM 4721 3478529 - 3478499 - R 83 -12 -3.18383 | opp_overlap 3478499 3478498 3478501, overlap 3478504 AGGTTTATCCATCAA TAGAACTCCGTCTA ATT TAGAAGGAGCTCTA ATTTAGTCTGCAAGG TERM 4722 3478499 - 3478529 + r 70 -9.8 -2.89602 | opp_overlap 3478499 3478504, overlap 3478498 3478501 AGGTTTATCCATCAA TAGAACTCCGTCTA ATT TAGAAGGAGCTCTA ATTTAGTCTGCAAGG TERM 4723 3478524 - 3478504 - R 75 -8.3 -3.71998 | opp_overlap 3478501 3478499 3478498, overlap 3478499 TATCCATCAATAGAA CTCCGTCTA ATT TAGAAGGAG CTCTAATTTAGTCTG TERM 4724 3478781 - 3478754 - R 100 -18.6 -3.06133 | opp_overlap 3478748 3478746 GAAGCTGTTAGCGAA TGACCGGCGTTT GTAT AAACGCCGGTCA TGATGAATGATATTT ECUMN_3366 3479582 - 3478833 - | hypothetical protein TERM 4725 3479451 - 3479434 - GR 100 -14.1 -3.78934 | opp_overlap 3479431 3479431 3479446, overlap 3479444 TCTCCGGTAGAAGAA GGGCCGC AAAC GCGGCCC GGGCTGTTATCAGAA sat 3483360 - 3479461 - | Serine protease precursor (Secreted autotransporter toxin) TERM 4726 3482138 - 3482158 + gH 72 -8.3 -3.65754 | opp_overlap 3482135 3482130 3482150 TGTAAAACATCATCA CTGGAATAC AAT GCATTCCAG TTTACAATGCTTTCT TERM 4727 3484268 - 3484221 - g 82 -12.9 -2.8547 | opp_overlap 3484232 3484235, overlap 3484232 3484235 AGGCTGTATATTATA CTGGCTGTAAACAACATGGCC ACCAAG GACCATGTTGTTTACAGCATA CCCTTGTTGCAAAAG TERM 4728 3484257 - 3484232 - g 74 -9.8 -3.54129 | opp_overlap 3484232 3484235, overlap 3484221 3484235 TATACTGGCTGTAAA CAACATGGCC ACCAAG GACCATGTTG TTTACAGCATACCCT ECUMN_3369 3484109 - 3484306 + | hypothetical protein iutA 3486571 - 3484292 - | Ferric aerobactin receptor precursor TERM 4729 3485995 - 3486031 + gT 77 -2.9 -5.14965 | overlap 3485996 TAAAGCCACTTTTTG TGCCAGCCTCAAACT CCATCAT GGTTTCCGGCTGGCC TTTTTTGGTCACGAT iucD 3487830 - 3486493 - | L-lysine 6-monooxygenase (Lysine N(6)-hydroxylase) TERM 4730 3486528 - 3486546 + g 100 -10.2 -5.03314 | opp_overlap 3486527 3486530, overlap 3486530 TATAGTGAGTTAAAG CAGCAGCC TCC GGCTGCGG TTTTTTCCGGCTGCC TERM 4731 3486530 - 3486544 + g 73 -11.4 -2.76422 | opp_overlap 3486527 3486530, overlap 3486528 TAGTGAGTTAAAGCA GCAGCC TCC GGCTGC GGTTTTTTCCGGCTG TERM 4732 3486544 - 3486530 - G 75 -11.4 -2.9462 | opp_overlap 3486530 3486528, overlap 3486527 TAGTGAGTTAAAGCA GCAGCC TCC GGCTGC GGTTTTTTCCGGCTG TERM 4733 3487729 - 3487715 - GR 71 -2.8 -4.7373 | GGATGCCAGGAAAAA TGAGGA TGT TCGTCA AAGAAGAGACAGTTC iucC 3489569 - 3487827 - | Aerobactin siderophore biosynthesis protein TERM 4734 3487992 - 3487982 - G 70 -4.6 -4.4727 | TGAAGAGTGAGAAAA GCGC AAA ACGC TCTGACATTTGTGGA TERM 4735 3489613 - 3489593 - R 89 -11.9 -3.61715 | GACCTCCGTGAAGAA GTGATGACG ATC CGCCATCAC CATGCGCGAGCGCTT iucB 3490516 - 3489569 - | aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase iucA 3492304 - 3490517 - | aerobactin siderophore biosynthesis protein TERM 4736 3491716 - 3491705 - G 70 -5.8 -4.19817 | overlap 3491706 TTTATCCACCGAAAA CCAC CGCA GTGG GAAGTGGGGTGCCAT TERM 4737 3492201 - 3492220 + g 82 -7.8 -4.56597 | overlap 3492202 TTCAGGAAGCACTGC GCAGCCAC ATCT GTGGCTGG TTTTTCAGAGGGCAG TERM 4738 3492202 - 3492219 + g 80 -11.3 -3.33744 | overlap 3492201 TCAGGAAGCACTGCG CAGCCAC ATCT GTGGCTG GTTTTTCAGAGGGCA shiF 3492377 - 3493570 + | putative membrane transport protein, major facilitator superfamily ECUMN_3377 3494718 - 3493729 - | hypothetical protein TERM 4739 3494846 - 3494834 - g 100 -4.7 -5.88565 | CCGACAACAAAAAAA CCGTG TTA CCCGG GCTAACAACGACCAG TERM 4740 3495079 - 3495067 - g 74 -3.3 -4.94222 | AACAAGGGAGAAAAA GCCAG TGT CTGCC GTCCATCACCAGAAA nanR 3494815 - 3495549 + | Transcriptional regulator ECUMN_3379 3496520 - 3495585 - | putative hydrolase, conserved protein TERM 4741 3496228 - 3496215 - G 71 -2.4 -4.96848 | GCCCTGAGATAAAAA CTCT GGAGCA AGAG CTGTACCTTCCTTAT TERM 4742 3496566 - 3496526 - R 80 -8.4 -4.29432 | opp_overlap 3496533, overlap 3496546 TAAACCCCATTAAAA TAACTCAGGTGACTGAAC AACTA ATACAGTCACCTGCATTA CAGTTATTTAACAAT ECUMN_3380 3497688 - 3496570 - | conserved hypothetical protein; putative exported protein ECUMN_3381 3498432 - 3497692 - | putative N-acetylneuraminic acid outer membrane channel protein nanC precursor ECUMN_3382 3499278 - 3498448 - | hypothetical protein TERM 4743 3498485 - 3498495 + g 71 -2.4 -4.9792 | overlap 3498477 3498483 AGCCATTCCAGAAGC AGGC TTT GCCA TTTTTCTATCGGATA ECUMN_3383 3500790 - 3499282 - | sialic acid transporter 2 (Sialic acid permease 2) TERM 4744 3500586 - 3500561 - G 74 -3.2 -5.0065 | opp_overlap 3500564, overlap 3500564 3500574 CATCGAGAAATAAAA GCAGCGGAAA TAAGGC TTGCCGCTTC TATTGTCGTCAAGCC nanK 3501678 - 3500803 - | N-acetylmannosamine kinase 2 ECUMN_3385 3502629 - 3501712 - | N-acetylneuraminate lyase 2 ECUMN_3386 3503085 - 3502822 - | hypothetical protein ECUMN_3387 3503263 - 3503060 - | hypothetical protein TERM 4745 3503543 - 3503576 + G 70 -5.2 -4.41206 | opp_overlap 3503552, overlap 3503545 3503552 GAGATAACGCCTGAT GAGCAGAAAGAGCC TATGGC GGCTCTTACTCCGC TTTTATCCACTCCTT ECUMN_3388 3503291 - 3503716 + | Conserved hypothetical protein, putative transposase ECUMN_3389 3503713 - 3504063 + | conserved hypothetical protein, putative transposase ORF2, IS66 family TERM 4746 3504152 - 3504134 - f 72 -8.8 -3.57792 | TCACTGAGCTGGAAA GGCTGCTC TCT GAGCAGGC TGAAGCCCTCCGTCA ECUMN_3391 3505155 - 3506729 + | putative transposase ORF 1, IS66 family ECUMN_3392 3507333 - 3506950 - | hypothetical protein ECUMN_3393 3508105 - 3507500 - | hypothetical protein TERM 4747 3508098 - 3508078 - G 70 -10.5 -2.74263 | overlap 3508077 AGGTCATGGTTAAAT CTCCGTATG GTT CATACGGAA TAACCACGTCGTAAA TERM 4748 3510547 - 3510532 - g 71 -9 -3.5394 | AAACCGGCTGGCAAA CAGGCT GAAC AGCCTG CTCCGGCGTTTCGAC ECUMN_3396 3510155 - 3510754 + | hypothetical protein ECUMN_3397 3512383 - 3510875 - | hypothetical protein TERM 4749 3513229 - 3513250 + H 79 -11.7 -2.53876 | overlap 3513217 3513215 TTCCTCTCTATTCGA TCACGGTTT GGCC AAACCGTGA TCGATTCAGATGCCA TERM 4750 3513642 - 3513667 + H 100 -12.6 -5.06052 | gap 1 TTATCTCCGTGAATC CCCCGC-CACC TTTCC GGTGCGCGGGG TTTTGTCTTTTTTCA ECUMN_3399 3513658 - 3514569 + | conserved hypothetical protein with GTPase domain TERM 4751 3514674 - 3514698 + F 78 -8.7 -4.07124 | opp_overlap 3514674 GATAATAGAATAAAA CGATCGATA CTTATTT TATCGATCG TTTATATCGATCGTC TERM 4752 3514698 - 3514674 - f 91 -8.7 -4.92791 | opp_overlap 3514674 GATAATAGAATAAAA CGATCGATA CTTATTT TATCGATCG TTTATATCGATCGTC TERM 4753 3514838 - 3514865 + F 100 -20 -5.45652 | TGTAATCCTTTACCT GCCGGTATCCAC ATCT GTGGATACCGGC TTTTTTATTCACCCT flu 3514897 - 3518022 + | antigen 43 (Ag43) phase-variable biofilm formation autotransporter; CP4-44 prophage TERM 4754 3518239 - 3518219 - g 85 -13.3 -3.24747 | opp_overlap 3518219 3518218 TGTTCAGAGCATTAA CCAGCACAG CGT CTGCGCTGG CAGGGTTCATATTGC ECUMN_3401 3518137 - 3520659 + | conserved hypothetical protein; putative membrane protein, yeeR ECUMN_3402 3520735 - 3521190 + | conserved hypothetical protein; putative exported protein similar to Aec69 TERM 4755 3521214 - 3521244 + T 100 -12.6 -3.85698 | overlap 3521216 GTCAGTTTCATGCTT CAGCCTCTGCCACA ACG TATGGCAGAGGCTA TTTATCAGGAGAAAC TERM 4756 3521216 - 3521242 + T 100 -15.2 -3.51934 | overlap 3521214 CAGTTTCATGCTTCA GCCTCTGCCACA ACG TATGGCAGAGGC TATTTATCAGGAGAA ECUMN_3403 3521497 - 3521309 - | hypothetical protein TERM 4757 3521524 - 3521549 + H 100 -16.9 -5.46129 | GATTTCATCCATCAG GCCGCGTCTTC TCCG GGAGACGCGGC TTTTTTCATTTATTA TERM 4758 3521604 - 3521617 + G 77 -6.7 -4.51174 | AAGGAGCAAATTATG CGACT AGCC AGTCG TTTTGGTTATGCTGC ECUMN_3404 3521601 - 3522422 + | hypothetical protein yeeS 3523205 - 3523651 + | putative DNA repair protein; CP4-44 prophage yeeT 3523714 - 3523935 + | conserved hypothetical protein; CP4-44 prophage ECUMN_3409 3523954 - 3524598 + | hypothetical protein TERM 4759 3524715 - 3524693 - gf 84 -8.3 -4.35483 | CCCGACGACAACAAA GACCGCCCC TGGTG GGGGCTGCC CTGCACCGTGACGCC TERM 4760 3524901 - 3524864 - gf 76 -8.5 -4.00042 | gap 1 CTGCTGATGAAACAA CTGGAACTCATGCTCACC AGC GGTGAAC-TGAATCCCCG CCATCAGCATACCGT ECUMN_3410 3524540 - 3525028 + | conserved hypothetical protein from phage origin TERM 4761 3525338 - 3525314 - gf 70 -7.2 -3.90048 | gap 2 TCTCGTTGAAAAATA CGCGCTGGTACG TAC CG-ACCAGC-CG GGATTCAGCGCAGGA ECUMN_3411 3524946 - 3525482 + | conserved hypothetical protein of phage origin yeeW 3525479 - 3525967 + | hypothetical protein ECUMN_3413 3525750 - 3526181 + | hypothetical protein TERM 4762 3526195 - 3526175 - f 77 -9.7 -3.65812 | opp_overlap 3526174 3526173, overlap 3526177 GCTTCTGCAACAGAA CAGGTGAGT CTT ACTCACCAG ACTTTATTCCACTGA TERM 4763 3526193 - 3526177 - f 80 -10.9 -3.41024 | opp_overlap 3526174 3526173, overlap 3526175 TTCTGCAACAGAACA GGTGAGT CTT ACTCACC AGACTTTATTCCACT TERM 4764 3526211 - 3526233 + F 100 -12 -4.61873 | overlap 3526205 ACTTTATTCCACTGA CGCCAGCC TGAATAC GGCTGGCG TTTTCGTTTATAAAC ECUMN_3414 3526263 - 3527111 + | hypothetical protein TERM 4765 3527205 - 3527192 - g 70 -4.5 -4.50583 | overlap 3527195 AACATGACTACAAAA GACCG TATT CAGTC CCAACTGAACCGTTC ECUMN_3415 3527180 - 3527575 + | hypothetical protein ECUMN_3416 3527568 - 3528308 + | hypothetical protein ECUMN_3417 3528280 - 3528501 + | hypothetical protein TERM 4766 3528716 - 3528744 + F 83 -11.8 -3.1926 | opp_overlap 3528722, overlap 3528722 GGCACCACTAATTCT TAAGAACCCGCC CACAA GGCGGGTTTTTG CTTTTGGATCTTTAT TERM 4767 3528722 - 3528738 + F 100 -10.8 -5.10154 | opp_overlap 3528722, overlap 3528716 ACTAATTCTTAAGAA CCCGCC CACAA GGCGGG TTTTTGCTTTTGGAT TERM 4768 3528738 - 3528722 - f 87 -11.5 -3.65581 | opp_overlap 3528722 3528716 ACTAATTCTTAAGAA CCCGCCC ACA AGGCGGG TTTTTGCTTTTGGAT ECUMN_3418 3528933 - 3529088 + | hypothetical protein TERM 4769 3529565 - 3529578 + F 74 -3.9 -4.89233 | opp_overlap 3529565 TTACAAGAAAATAAT CAATT GATA AATTG TTTTTGGTATTAATA TERM 4770 3530296 - 3530282 - g 70 -4.2 -4.65895 | opp_overlap 3530283, overlap 3530283 TCCTTCACTGAAAAA TTTCGG CAA CCGAAT TATCGCCATTACCAA kpsF 3529863 - 3530882 + | Polysialic acid capsule expression protein kpsE 3530954 - 3532102 + | Capsule polysaccharide export inner-membrane protein kpsD 3532123 - 3533802 + | Polysialic acid transport protein precursor kpsU 3533812 - 3534552 + | 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) TERM 4771 3534599 - 3534624 + G 77 -8.3 -4.08706 | opp_overlap 3534600, overlap 3534600 TCCGCATCTGGAGAA ATTTCTGGCGC AACC GTGCCAGAAAC TTTCTCTGCTGCGCC TERM 4772 3534623 - 3534600 - g 78 -9.6 -3.87815 | opp_overlap 3534600 3534599 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGC TERM 4773 3534600 - 3534623 + G 75 -11.8 -3.04902 | opp_overlap 3534600, overlap 3534599 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGC TERM 4774 3535390 - 3535410 + G 77 -6.1 -4.60041 | TATCTGCCCGACGCG GTTCTGCCA CGC TGGAGGAAC TTTTTGCCGCTGCAT kpsC 3534549 - 3536576 + | Capsule polysaccharide export protein TERM 4775 3536668 - 3536681 + G 79 -3.7 -5.11613 | TATCTGCTATTGCAG GGGCC GATG GGACC TTTTTTCAATGATGT kpsS 3536611 - 3537843 + | Capsule polysaccharide export protein TERM 4776 3538370 - 3538349 - T 71 -2.3 -5.09225 | ACGTTATCGAAAAAA GCTTTAAAA CCAG TCTTTAAGC GTGAGCAGGTCACTC ECUMN_3425 3538763 - 3538491 - | hypothetical protein ECUMN_3426 3538833 - 3538934 + | Putative integrase core domain protein (fragment) ECUMN_3427 3540993 - 3539416 - | hypothetical protein TERM 4777 3539582 - 3539569 - G 74 -2.5 -5.03405 | opp_overlap 3539569 AATATTAGACAAAAA TTTAT ATTC ATAAA ATTCTTGCTGAATAC TERM 4778 3540291 - 3540310 + g 76 -3.6 -4.90013 | TATACCAATTCGTTT CAGCAAGA ATTT TTTTGTTG TTTTTGCTTGACTTC ECUMN_3428 3541430 - 3540990 - | hypothetical protein ECUMN_3429 3542088 - 3541342 - | hypothetical protein ECUMN_3430 3544627 - 3542126 - | hypothetical protein TERM 4779 3544379 - 3544408 + g 100 -5.9 -5.75822 | overlap 3544381 TTTACTAGCTTTAGC TTTAATGTTTTCA TCGA TGAAAACGTTACA TTTTTTTGCTTTATC kpsT 3545521 - 3544835 - | Polysialic acid transport ATP-binding protein ECUMN_3432 3549433 - 3545687 - | hypothetical protein TERM 4780 3545738 - 3545748 + g 70 -5.4 -4.31329 | AACTAATGTGTCATA GTCA TCA TGAC TTTTCCAGTTTTTGG TERM 4781 3546679 - 3546695 + g 100 -5.2 -5.81412 | TATCGACACCATTAT TCATTC CAAAA GAATGA TTTTTTTTAAGTGCC ECUMN_3433 3550445 - 3549453 - | putative Capsule biosynthesis protein TERM 4782 3550107 - 3550095 - G 71 -2.6 -4.89567 | TGGCAAAATATAAAA CGGC TTTAT GCCA GATTTTATTTTCTCT TERM 4783 3550372 - 3550385 + g 75 -5.3 -4.60073 | overlap 3550361 3550362 TTTTTTGTTGCCTCA GCAAT ATTT ATTGC TTTTCTAATTATATC kpsM 3551381 - 3550545 - | Polysialic acid transport protein TERM 4784 3551485 - 3551459 - R 77 -4.4 -5.04987 | opp_overlap 3551459, overlap 3551461 AATAGCCGCAAAAAA TTTCAGCAGAAA TTA TTTCCGCAGAGA TAAATAGATCTATTT TERM 4785 3551591 - 3551608 + r 76 -5.7 -4.75308 | opp_overlap 3551594 TTTAGAATGCAGAGT TAATTTC TCAG GAAATTA TTTTTCACTATTACT yghD 3552914 - 3552378 - | putative secretion pathway M-type protein, membrane anchored yghE 3554094 - 3552916 - | putative secretion pathway protein, L-type protein TERM 4786 3553164 - 3553185 + g 71 -2.3 -5.00884 | overlap 3553169 CTGCGAGCAGCCGGG TATCGTC GGCCTGTG GGCGATA TTTTTTCAGCGCCAT ECUMN_3437 3555068 - 3554091 - | putative type II secretion protein (GspK-like) TERM 4787 3554218 - 3554236 + g 73 -3.8 -4.81752 | AGCCAGAAGTAATTG CTGTCC ACGCTCA GGACGG TTTTTAGCTGTTTTT TERM 4788 3554833 - 3554815 - G 91 -8 -5.03314 | opp_overlap 3554815 3554814, overlap 3554827 GGCAGTGGGAAAAAA CGAGGGCC AGA AGCCCACG GTTGTGCCAGATGCA ECUMN_3438 3555670 - 3555065 - | conserved hypothetical protein; putative exported protein TERM 4789 3555627 - 3555616 - G 77 -5.8 -4.67353 | overlap 3555617 CCAGTGAGGCAAAAA TGGC GATT GCCA CCAGCATTTCCAGTA ECUMN_3439 3556038 - 3555667 - | putative type II secretion protein (GspI-like) TERM 4790 3556004 - 3555993 - G 77 -5.8 -4.62783 | CAGCCAGCGCAAAAA TCGC CAGT GCGA GCATCACTTCCAGCA ECUMN_3440 3556598 - 3556035 - | conserved hypothetical protein; putative exported protein ECUMN_3441 3557084 - 3556602 - | putative general secretion pathway protein G precursor (epsG-like) epsF 3558297 - 3557074 - | General secretion pathway protein F TERM 4791 3557494 - 3557477 - G 70 -4.7 -4.57341 | AATGTGCGGGAAAAA CGCGCCG TATT CAGCCCG CGCGCAACACGCCCC epsE 3559790 - 3558297 - | general secretion pathway protein E TERM 4792 3559106 - 3559119 + g 75 -4.5 -4.83169 | overlap 3559088 3559107 CCAGACGCTCCAGCG TCAGG CGGG CCTGG TTTTTGTCCAGCAGT TERM 4793 3559532 - 3559506 - G 73 -9.4 -3.59979 | opp_overlap 3559511, overlap 3559509 TTCTGCGAGGGTAAA GAAGTCCTCGGC GGA ACCGAGATCTTC CATCAACTGGCGAGC epsD 3561850 - 3559790 - | general secretion pathway protein D precursor TERM 4794 3561125 - 3561152 + g 73 -4.1 -4.73388 | gap 1, overlap 3561124 3561125 GACAATCTGTGATTT CAGCGTCGCAGG CTGGT TCT-CGCCGCTG TTTTTCGTCAGGCTT TERM 4795 3561239 - 3561259 + g 74 -9.8 -3.48593 | AGTGCGATTACCCGC GTGATCCA CGCGC TGGATCAC TTCTGTCAACCGCTC TERM 4796 3561637 - 3561648 + g 72 -4.4 -4.68103 | CCTGTACGCCCGGCC CCAT AATG ATGG TTTTATTAAGGTTAG TERM 4797 3561777 - 3561755 - G 76 -10.6 -3.36492 | opp_overlap 3561749 3561748 CGGTGAACTGCATAA TGCCGCTG CCAACAC CAGCGGCA GTAAACGCTTTTTTG yghF 3562839 - 3561880 - | putative secretion pathway protein, C-type protein TERM 4798 3562231 - 3562242 + g 88 -2.2 -5.5112 | overlap 3562230 AGCTTGCTTTGCTTC GTCA CTGA TGGC TTTTTTGTTGGTCAC TERM 4799 3562823 - 3562809 - G 77 -8.6 -4.13872 | ATTGAATGAGATAAA TTCGTG CGT CACGAA AAACAACCCGCGCCA yghG 3563267 - 3562857 - | hypothetical protein TERM 4800 3563160 - 3563175 + g 70 -4.6 -4.50058 | overlap 3563161 TTGCGCCTGTTTTTT CGCCAG TAAA CTGGCA TTTTCATTATGGCTG pppA 3564142 - 3563333 - | bifunctional prepilin leader peptidase and methylase TERM 4801 3563400 - 3563412 + g 71 -2.6 -4.91109 | GGTCCAAAAGGCAGC GGGG TTGAT CCTC TTTTTGTAATAACGG TERM 4802 3563951 - 3563973 + g 70 -4 -4.67353 | overlap 3563954 GCAATGCGGACAGTG CGAGCGTGGC AGC GCCAGGCTTA TTTTTGACTGCGTAC TERM 4803 3563954 - 3563970 + g 82 -7.9 -4.44608 | overlap 3563951 ATGCGGACAGTGCGA GCGTGGC AGC GCCAGGC TTATTTTTGACTGCG TERM 4804 3564243 - 3564254 + r 72 -7.2 -4.09685 | TTTCATGCCGGATGC GGCG CGAG CGCC TTTTCCGGCATACAG yghJ 3568834 - 3564272 - | inner membrane lipoprotein ECUMN_3449 3568985 - 3569194 + | conserved hypothetical protein; putative exported protein TERM 4805 3569283 - 3569311 + T 77 -8.9 -3.73068 | opp_overlap 3569280 3569275 3569284, overlap 3569284 GAATAATGTAAATGT AGCCGGATGAT ATTAACG ATCATCCGGCA TTATTGACTTACGAA TERM 4806 3569284 - 3569310 + T 82 -12.4 -2.8352 | opp_overlap 3569284 3569280 3569275, overlap 3569283 AATAATGTAAATGTA GCCGGATGAT ATTAACG ATCATCCGGC ATTATTGACTTACGA TERM 4807 3569310 - 3569284 - T 81 -12.4 -2.69186 | opp_overlap 3569283 3569284, overlap 3569280 3569275 AATAATGTAAATGTA GCCGGATGAT ATTAACG ATCATCCGGC ATTATTGACTTACGA yghK 3571002 - 3569320 - | glycolate transporter TERM 4808 3569866 - 3569853 - G 81 -4.5 -5.06414 | TCGCTGCAATAAAAA TAGCG GTGC CGCCA GCAGAGAGAGGGTCG TERM 4809 3570172 - 3570184 + g 72 -5.5 -4.56597 | TTGTCCCATGCTGAT TGCCG TTT CGGTA TTTTTCGGCCGCCAG TERM 4810 3570506 - 3570496 - G 72 -8.2 -3.794 | GCCCAACGCACCAAA CGCC ACC GGCG CAGTATTGGCAATCA TERM 4811 3571343 - 3571318 - R 82 -12.6 -2.83164 | opp_overlap 3571318 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT TERM 4812 3571318 - 3571343 + r 93 -10.4 -5.04987 | opp_overlap 3571318 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT glcB 3573528 - 3571357 - | malate synthase G TERM 4813 3573175 - 3573202 + g 70 -10.6 -2.82803 | gap 1, opp_overlap 3573177, overlap 3573174 3573177 ATTCATTGCCGGAAC CACCAGCTGTGGC CCC GCC-TGGCTGGTG ATTTCGCTGTCAATG glcG 3573954 - 3573550 - | hypothetical protein TERM 4814 3573756 - 3573771 + g 72 -7.5 -3.96327 | TTTCACGACGTCCCA GCGCG GCGGTA CGCGC TTTCTCCTGGGAGAT glcF 3575182 - 3573959 - | glycolate oxidase iron-sulfur subunit glcE 3576245 - 3575193 - | glycolate oxidase FAD binding subunit TERM 4815 3575912 - 3575890 - G 72 -5.4 -4.46212 | overlap 3575891 3575892 3575902 GTGCCGAGGACAAAA TCGCGGACCG AAC CGCTCCACGG GCGACGCGGCCCCGC glcD 3577744 - 3576245 - | glycolate oxidase subunit, FAD-linked glcC 3577995 - 3578759 + | DNA-binding transcriptional dual regulator, glycolate-binding yghO 3579908 - 3578766 - | putative DNA-binding transcriptional regulator TERM 4816 3579321 - 3579332 + g 90 -4.4 -5.40072 | CACCTTCTTACGCAC CTGA TCCA TCAG TTTTTTTAGCGCCGG TERM 4817 3579742 - 3579753 + g 74 -5.8 -4.56597 | TGCCAGATGATATGG TCCG TCCC CGGA TTTTTCGCAGACAAA TERM 4818 3580513 - 3580490 - g 91 -7.4 -5.09426 | gap 1, opp_overlap 3580495 CTGAACCTGAAAAAA GGCGATC-GCG TGG CGCTGATTGCC GAAACGAGTAGCGGG TERM 4819 3581739 - 3581751 + G 70 -4.1 -4.63218 | CGGAAATTCATTCTG GCGAT GCG ATTGC TTTTGTTACCGCCCA ECUMN_3458 3580253 - 3582934 + | Putative AMP-dependent synthetase ECUMN_3460 3582966 - 3583214 + | hypothetical protein ECUMN_3461 3583214 - 3584386 + | Putative 8-amino-7-oxononanoate synthase TERM 4820 3584393 - 3584419 + T 100 -18 -3.94184 | opp_overlap 3584387 3584388 AAGCAGTAATGTGAG CCCGCTGTGGTG CTG CGCCACGGCGGG TTTAATGTTGACTGT ECUMN_3464 3586567 - 3585497 - | hypothetical protein TERM 4821 3585942 - 3585960 + g 73 -11.8 -2.7083 | overlap 3585937 AGAAGATAGGCGGTC CCGTTATG CAA CATAACGG TCGGTTTCTCAGGTG ECUMN_3465 3587161 - 3586598 - | Putative transcriptional regulator TERM 4822 3586739 - 3586796 + g 93 -2 -5.61824 | gap 1, opp_overlap 3586743, overlap 3586734 3586743 CTGCAAGTGCCAGGC AACACGTCCCTGTCCATTGCCGTCAAT AACGA ATTG-CGCCCATGGATAGCGGCGTTTA TTTTTTTCGATTTTG TERM 4823 3586743 - 3586792 + g 95 -7.2 -5.21683 | gap 1, opp_overlap 3586743, overlap 3586734 3586739 AAGTGCCAGGCAACA CGTCCCTGTCCATTGCCGTCAAT AACGA ATTG-CGCCCATGGATAGCGGCG TTTATTTTTTTCGAT ECUMN_3466 3587994 - 3587170 - | hypothetical protein TERM 4824 3587581 - 3587571 - G 70 -4.6 -4.45117 | GAGAGCTTAAATAAA CCCG TAA CAGG TTGCCGTAATACGAC ECUMN_3467 3589343 - 3587994 - | putative membrane protein, conserved protein yghR 3590147 - 3589389 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain yghS 3590892 - 3590179 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain yghT 3591066 - 3591758 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4825 3591800 - 3591766 - T 100 -13.7 -4.68994 | opp_overlap 3591772 ATCACTAGTCAAAAA TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA GGAAGGTTAAATCAA TERM 4826 3591772 - 3591794 + T 80 -9.1 -4.08692 | opp_overlap 3591766 AGTCAAAAATGGAAA TGCCCGATC GCCAG GACCGGGCA TTTTCAGGAAGGTTA pitB 3593306 - 3591807 - | phosphate transporter TERM 4827 3593537 - 3593593 + r 70 -9.1 -3.20955 | opp_overlap 3593535 3593537 3593547, overlap 3593548 3593587 TATAAATATTGAATA TTTTG-ATTAATCCCCGCACTGATTAT TCTTC ATAATCAGTGCGGGG-TTGCTACAACA TGTATTACTCTTTCA TERM 4828 3593583 - 3593547 - R 100 -18.2 -3.16668 | opp_overlap 3593537 3593548, overlap 3593535 3593537 GAATATTTTGATTAA TCCCCGCACTGATTAT TCTTC ATAATCAGTGCGGGGT TGCTACAACATGTAT TERM 4829 3593548 - 3593582 + r 100 -21.7 -3.15249 | opp_overlap 3593547 3593535 3593537, overlap 3593537 AATATTTTGATTAAT CCCCGCACTGATTAT TCTTC ATAATCAGTGCGGGG TTGCTACAACATGTA gss 3595457 - 3593598 - | fused glutathionylspermidine amidase ; glutathionylspermidine synthetase TERM 4830 3595131 - 3595109 - G 78 -9.1 -3.88946 | gap 1 TATCCCAGATAAGAA GCGCGC-CCG CGAC CGGTGCACGC GGCGAGCCATTAGGA yghU 3595662 - 3596528 + | S-transferase TERM 4831 3596590 - 3596579 - T 72 -7.2 -4.09864 | overlap 3596580 AGGTAGGCCGGAAAA GGCG TTCA CGCC GCATCCGGCAATCGT TERM 4832 3596645 - 3596612 - T 74 -9.5 -3.31322 | opp_overlap 3596619 3596620 3596622, overlap 3596580 3596613 GGCAATCGTGCATAA TGCCTGATGCGACGC TGCC GCGTCTTATCAGGCC TACAATCGGCACCCG TERM 4833 3596644 - 3596613 - T 84 -13 -2.58579 | opp_overlap 3596619 3596620 3596622, overlap 3596580 3596612 GCAATCGTGCATAAT GCCTGATGCGACGC TGCC GCGTCTTATCAGGC CTACAATCGGCACCC TERM 4834 3596744 - 3596711 - T 74 -9.5 -3.31322 | opp_overlap 3596716, overlap 3596679 3596712 GGCAATCGTGCACAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACGAAAGCTAATCA TERM 4835 3596743 - 3596712 - T 84 -13 -2.58579 | opp_overlap 3596716, overlap 3596679 3596711 GCAATCGTGCACAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACGAAAGCTAATC TERM 4836 3596716 - 3596734 + T 80 -11 -3.30124 | opp_overlap 3596679 3596712 3596711 TCGTGCACAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACGA hybG 3597008 - 3596760 - | hydrogenase 2 accessory protein hybF 3597362 - 3597021 - | protein involved with the maturation of hydrogenases 1 and 2 TERM 4837 3597264 - 3597229 - G 88 -8.4 -4.67641 | gap 2, opp_overlap 3597229 3597230, overlap 3597230 3597231 3597233 ATTTCAAAACTAAAA CGGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CCA ATTTCCAGCCACACG TERM 4838 3597263 - 3597230 - G 72 -9.7 -3.395 | gap 2, opp_overlap 3597229 3597230, overlap 3597229 3597231 3597233 TTTCAAAACTAAAAC GGACGGCGCTCTCCT CAACGC AGGAGAGCGC-G-CC AATTTCCAGCCACAC TERM 4839 3597263 - 3597231 - G 76 -12.1 -2.62977 | gap 1, opp_overlap 3597230 3597229, overlap 3597230 3597229 3597233 TTCAAAACTAAAACG GACGGCGCTCTCCT CAACGC AGGAGAGCGC-GCC AATTTCCAGCCACAC TERM 4840 3597261 - 3597233 - G 71 -11.1 -2.84272 | gap 1, opp_overlap 3597230 3597229, overlap 3597230 3597231 3597229 CAAAACTAAAACGGA CGGCGCTCTCCT CAACGC AGGAGAGCGC-G CCAATTTCCAGCCAC hybE 3597843 - 3597355 - | hydrogenase 2-specific chaperone TERM 4841 3597408 - 3597385 - G 90 -13.2 -3.53091 | gap 1, opp_overlap 3597372 3597386, overlap 3597358 3597387 ACTCCTGCGGCCAAA CA-GCAGGGCG CGA CGCCCTGCGTG TGGTACATCCGGATT TERM 4842 3597386 - 3597406 + g 77 -12.5 -2.80816 | opp_overlap 3597358 3597385 3597387, overlap 3597372 CTCCTGCGGCCAAAC AGCAGGGCG CGA CGCCCTGCG TGTGGTACATCCGGA TERM 4843 3597405 - 3597387 - G 100 -16 -3.34398 | opp_overlap 3597386 3597372, overlap 3597358 3597385 TCCTGCGGCCAAACA GCAGGGCG CGA CGCCCTGC GTGTGGTACATCCGG hybD 3598330 - 3597836 - | maturation element for hydrogenase 2 TERM 4844 3597977 - 3597992 + g 70 -4.6 -4.57569 | CGATTCCGGGATCAC GCCGAC CAGG GTCAGC TTTTTCGGAAACTCA hybC 3600033 - 3598330 - | hydrogenase 2, large subunit TERM 4845 3599879 - 3599893 + g 72 -4.9 -4.61633 | opp_overlap 3599871, overlap 3599882 3599886 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 4846 3600052 - 3600063 + r 77 -4.4 -5.07652 | overlap 3600041 3600046 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3601208 - 3600030 - | hydrogenase 2 cytochrome b type component hybA 3602184 - 3601198 - | hydrogenase 2 4Fe-4S ferredoxin-type component TERM 4847 3601515 - 3601536 + g 79 -3.6 -5.0538 | overlap 3601516 GATAGTGGTATTCGC TGCCTGGC TTCAGC GCCAGACG TTTTTTCGCCTCCGC TERM 4848 3601841 - 3601854 + g 72 -6.7 -4.29106 | CAGTTCGGATCGACG CAGTG CATA CACTG TTTCTTAATGTACGC hybO 3603305 - 3602187 - | hydrogenase 2, small subunit ECUMN_3482 3603497 - 3603312 - | hypothetical protein yghW 3603781 - 3603494 - | hypothetical protein TERM 4849 3603793 - 3603821 + r 70 -7 -4.07568 | gap 1, overlap 3603794 TCATCGTTCACCTCA T-TCGCTATATAT TGCC ATATATAGCGATA TTTTAGGCAAAGAAC TERM 4850 3603794 - 3603819 + r 89 -12.1 -3.63744 | overlap 3603793 CATCGTTCACCTCAT TCGCTATATAT TGCC ATATATAGCGA TATTTTAGGCAAAGA ECUMN_3484 3604826 - 3603900 - | putative enzyme yghZ 3604944 - 3605984 + | aldo-keto reductase TERM 4851 3606016 - 3605996 - T 100 -16.1 -3.62775 | ATGATCTGTTAATAA CGGGCGCGA GAA CCGCGCCCG AATCAGATCAGTGAT yqhA 3606518 - 3606024 - | conserved hypothetical protein; putative inner membrane protein yghA 3606709 - 3607593 + | putative glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain TERM 4852 3607628 - 3607596 - T 91 -11.3 -4.14739 | opp_overlap 3607603, overlap 3607600 3607602 3607603 GCATTTAGGTTAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA AATGCGCCTATAAGG TERM 4853 3607624 - 3607600 - T 91 -9.9 -4.67048 | opp_overlap 3607603, overlap 3607596 3607602 3607603 TTAGGTTAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAAATGCGCCTAT TERM 4854 3607622 - 3607602 - T 100 -12.5 -3.94471 | opp_overlap 3607603, overlap 3607600 3607596 3607603 AGGTTAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAAATGCGCCT TERM 4855 3607603 - 3607621 + T 100 -16 -4.62069 | opp_overlap 3607602 3607600 3607596 3607603 GGTTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC TERM 4856 3607621 - 3607603 - T 100 -16 -2.95598 | opp_overlap 3607603, overlap 3607602 3607600 3607596 GGTTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC ECUMN_3488 3608212 - 3607703 - | transposase IS605 family, IS200 group ECUMN_3489 3608306 - 3608118 - | hypothetical protein TERM 4857 3608274 - 3608292 + gr 100 -16 -4.52589 | GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCTGTGCACAAA TERM 4858 3608300 - 3608346 + gr 91 -13.1 -3.19522 | opp_overlap 3608310, overlap 3608307 3608310 GCTGGGGGTTTTCTG TGCACAAAAATGCCCGGTTGT GAAAA GCAACCGGGCATCATTGTGAA TTCACTCTTACCTGA TERM 4859 3608307 - 3608339 + r 71 -8.4 -3.43117 | opp_overlap 3608310, overlap 3608300 3608310 GTTTTCTGTGCACAA AAATGCCCGGTTGT GAAAA GCAACCGGGCATCA TTGTGAATTCACTCT TERM 4860 3608310 - 3608336 + r 89 -14.5 -2.86539 | opp_overlap 3608310, overlap 3608307 3608300 TTCTGTGCACAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTGTGAATTCAC TERM 4861 3608336 - 3608310 - R 100 -13.8 -4.82901 | opp_overlap 3608310 3608307 3608300 TTCTGTGCACAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTGTGAATTCAC TERM 4862 3608541 - 3608567 + r 74 -10.8 -2.78298 | overlap 3608540 GCAATAGATTTTGTA GGCCTGATGAGC GTA GCGCATCAGGCA ATTCTACTTTACTTC exbD 3609001 - 3608576 - | membrane spanning protein in TonB-ExbB-ExbD complex exbB 3609742 - 3609008 - | membrane spanning protein in TonB-ExbB-ExbD complex TERM 4863 3609991 - 3609981 - H 75 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 4864 3610141 - 3610125 - g 70 -5.8 -4.21792 | AGAAGCCAAAAAACA CGCGAC ACGTA ATCGCG CCAATGGAGAGTTGT metC 3609994 - 3611181 + | cystathionine beta-lyase, PLP-dependent TERM 4865 3611683 - 3611709 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT yghB 3611321 - 3611980 + | conserved hypothetical protein; putative inner membrane protein TERM 4866 3611989 - 3612018 + T 72 -7.8 -3.91911 | overlap 3611991 CGCCTGACGATTTTC CCCGTTCCCGGT TGCTGT ACCGGGAACGTA TTTAATTCCCCTGCA TERM 4867 3611991 - 3612016 + T 100 -14.8 -3.5486 | overlap 3611989 CCTGACGATTTTCCC CGTTCCCGGT TGCTGT ACCGGGAACG TATTTAATTCCCCTG yqhC 3612976 - 3612020 - | putative DNA-binding transcriptional regulator TERM 4868 3614016 - 3614001 - g 75 -4.6 -4.8622 | CTGTGGAATGAAAAA CGCGAT ACCA AGCGCG CTAAGCTGCTGCAAT yqhD 3613113 - 3614276 + | alcohol dehydrogenase, NAD(P)-dependent TERM 4869 3614363 - 3614334 - f 80 -10.7 -3.36968 | opp_overlap 3614337, overlap 3614336 3614337 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 4870 3614361 - 3614336 - f 91 -13.3 -3.25192 | opp_overlap 3614337, overlap 3614334 3614337 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 4871 3614337 - 3614360 + F 100 -16.8 -3.25823 | opp_overlap 3614336 3614334 3614337 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 4872 3614360 - 3614337 - f 100 -16.8 -2.54794 | opp_overlap 3614337, overlap 3614336 3614334 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3614381 - 3615208 + | 2,5-diketo-D-gluconate reductase A TERM 4873 3615220 - 3615250 + F 72 -7.4 -4.10429 | overlap 3615221 CTAACATGCAAATTC TCCCGGTGGCGGTA ATG TTCCGCTACCGGAC TTTTCAGAAATCATT TERM 4874 3615221 - 3615249 + F 76 -10.9 -3.05775 | overlap 3615220 TAACATGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT yqhG 3615408 - 3616334 + | hypothetical protein yqhH 3616385 - 3616642 + | putative outer membrane lipoprotein TERM 4875 3616649 - 3616680 + T 91 -8.7 -5.0538 | opp_overlap 3616651, overlap 3616651 GCAGAATGATAAAAA AATCCCCGGTAGC GTGTCA GTTGCCGGGGATA TTTTTTAACGTCCAA TERM 4876 3616678 - 3616651 - T 100 -6.9 -5.73339 | opp_overlap 3616651 3616649 AGAATGATAAAAAAA TCCCCGGTAGC GTGTCA GTTGCCGGGGA TATTTTTTAACGTCC TERM 4877 3616651 - 3616678 + T 93 -11.3 -4.15748 | opp_overlap 3616651, overlap 3616649 AGAATGATAAAAAAA TCCCCGGTAGC GTGTCA GTTGCCGGGGA TATTTTTTAACGTCC ygiQ 3618904 - 3616685 - | hypothetical protein TERM 4878 3616744 - 3616756 + g 90 -4.8 -5.44119 | TCACCGGACGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC TERM 4879 3618097 - 3618109 + g 70 -5.5 -4.30719 | overlap 3618098 TGGCTTCCTGCTTTT TCGGT GCC ACCGG TTTGTTATCCGCGCA TERM 4880 3619018 - 3618977 - R 70 -7.4 -3.93913 | gap 1, overlap 3618978 3618981 AAAGAGAAATCGAAA GGTAT-TCCATACTCGCCC TCCTC GGGCGAGTATGAAGATTAC GGTACCGGATTGACC TERM 4881 3619013 - 3618981 - R 82 -12.8 -2.6993 | overlap 3618977 3618978 AGAAATCGAAAGGTA TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG ATTACGGTACCGGAT sufI 3620427 - 3619015 - | repressor protein for FtsI plsC 3621239 - 3620502 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase ECUMN_3502 3621442 - 3621287 - | hypothetical protein parC 3623731 - 3621473 - | DNA topoisomerase IV, subunit A TERM 4882 3622902 - 3622923 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACGC TERM 4883 3623860 - 3623834 - R 79 -11.5 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGACGGCGA TAAAGGCATCAATGT ygiS 3625476 - 3623869 - | transporter subunit: periplasmic-binding component of ABC superfamily TERM 4884 3625156 - 3625139 - G 72 -5.5 -4.46926 | overlap 3625140 CAGCCGAGGACAAAA TCCTCTG CCGT CAGAGGC TGACCGTCGGACCAC TERM 4885 3625597 - 3625583 - R 100 -4.9 -5.63517 | opp_overlap 3625583 CCGGTAAAGAAAAAA GCGAG TTGCC CCCGC TTTTCCATTAATTAA TERM 4886 3625650 - 3625629 - R 81 -11.7 -3.09327 | GGATTTCATTCAATA GTTCTGGAT GCTT ATCCAGAAC ACGTAAAAGTTTGAT ygiT 3626004 - 3625609 - | putative DNA-binding transcriptional regulator TERM 4887 3625742 - 3625765 + g 74 -2.5 -5.03145 | gap 1, overlap 3625744 CCAAAAATTTCGCTT GC-CTCTTTT TGGGT AAGAGAGAGC TTTTTTCGAACCTTC mqsR 3626302 - 3626006 - | motility quorum-sensing regulator TERM 4888 3626085 - 3626065 - G 78 -8.9 -4.21439 | opp_overlap 3626064 TAATTTTAAGATAAA CCTGGCCTG TAA CAAGCCTGG GTCTGTAAACATCCT ygiV 3626989 - 3626507 - | putative transcriptional regulator ygiW 3627434 - 3627042 - | hypothetical protein qseB 3627586 - 3628245 + | DNA-binding response regulator in two-component regulatory system with QseC qseC 3628242 - 3629591 + | sensory histidine kinase in two-component regulatory system with QseB TERM 4889 3629600 - 3629631 + T 100 -14.6 -4.30576 | opp_overlap 3629609 CTGGTAACTTCTCTG TCTATGAGAGCCGT TAAA ACGACTCTCATAGA TTTTACTAATAGCAA ygiZ 3629969 - 3629637 - | conserved hypothetical protein; putative inner membrane protein TERM 4890 3630551 - 3630537 - g 77 -2.9 -5.1287 | TGGACAGTGAAAAAA TACAT TGATG ATGTA TTCACCGAAGGTCAC mdaB 3630297 - 3630878 + | NADPH quinone reductase ygiN 3630909 - 3631223 + | quinol monooxygenase TERM 4891 3631233 - 3631261 + T 74 -7.3 -4.15396 | overlap 3631235 ATTTAATCCTGCCTT GTTTGCCCGGCCA TCC TGACCGGGCAATG TTCTTTCCTTTAAAC TERM 4892 3631235 - 3631259 + T 100 -14.3 -3.66578 | overlap 3631233 TTAATCCTGCCTTGT TTGCCCGGCCA TCC TGACCGGGCAA TGTTCTTTCCTTTAA parE 3633163 - 3631271 - | DNA topoisomerase IV, subunit B TERM 4893 3632181 - 3632193 + g 75 -5.5 -4.72272 | opp_overlap 3632181 GTCTGCCCGGCAAAC TGCGG ATC CTGCA TTTTTACTGACAGCA TERM 4894 3632835 - 3632852 + g 77 -3.3 -5.06816 | overlap 3632838 CCCACGCCATGCAGG CCGCCAG AGAA CTGGTAG TTTTTGTTAGAGAAT TERM 4895 3632892 - 3632867 - G 78 -10.5 -3.48276 | GTTTTTGTTAGAGAA TTTACCGCCTG CATG CAGACGGCAAA GAATCAGTTCAACCG yqiA 3633773 - 3633192 - | putative esterase TERM 4896 3633664 - 3633618 - G 73 -11.8 -2.61548 | opp_overlap 3633615 3633614, overlap 3633614 3633615 TTCCAGGACAATGGA TTCCAGCAGTT-CTGCCGCATC GGAAG GATACGGCGGCAACTGC-GGAA TGATCATCTCTACGT cpdA 3634600 - 3633773 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 3635047 - 3634625 - | putative dehydrogenase TERM 4897 3634714 - 3634724 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA TERM 4898 3635072 - 3635124 + r 72 -6.9 -4.20712 | overlap 3635080 CTCATTTTTTAACGC TTGATGATGCAGCTGCAGCCATTGC AAA GCGATGACCGACGCTGCGTTGTCGA TTTTCCCCTCTTCTA nudF 3635677 - 3635048 - | ADP-ribose pyrophosphatase TERM 4899 3636974 - 3636946 - g 77 -9.7 -3.61398 | TTCCTCCTTCAACAA CATTAATGCTTCT ATC AGTAGCATTAACG CCTACAAACAAGCCG tolC 3635882 - 3637363 + | transport channel TERM 4900 3637855 - 3637840 - g 70 -4.6 -4.46926 | TATGGCACCAGAAAA CCAGGC GCAG GCCCAG CAATCCAGCGGAAGT TERM 4901 3638148 - 3638130 - g 70 -5.2 -4.41348 | CTGTTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC ygiB 3637607 - 3638182 + | conserved hypothetical protein; putative outer membrane protein TERM 4902 3638250 - 3638294 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 3638264, overlap 3638253 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAA CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGAC TERM 4903 3638253 - 3638291 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 3638264, overlap 3638250 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAA CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT ygiC 3638188 - 3639348 + | putative enzyme TERM 4904 3639361 - 3639381 + F 100 -12.6 -4.3953 | opp_overlap 3639361 TAATACTGTTCAATA TTGCCCCG TTTAC CGGGGCAA TTTATTATACTTCGC TERM 4905 3639381 - 3639361 - f 83 -12.6 -3.04248 | opp_overlap 3639361 TAATACTGTTCAATA TTGCCCCG TTTAC CGGGGCAA TTTATTATACTTCGC TERM 4906 3639869 - 3639855 - g 83 -5.6 -5.1634 | opp_overlap 3639864 ATAAATATAGAAAAA CTCTGG TAG CCGGAG CTGTGGCGATAACTC TERM 4907 3640408 - 3640381 - g 82 -3.4 -5.24799 | gap 1, opp_overlap 3640397 TGAGAAAGATAAAAA TGCCGGTATCC TTGATGC GGGT-CCGGCA ACCGGCGCACTACCT assT 3639833 - 3641629 + | arylsulfate sulfotransferase dsbA 3641647 - 3642315 + | Thiol:disulfide interchange protein dsbA precursor ECUMN_3525 3642330 - 3643001 + | putative protein-disulfide oxidoreductase TERM 4908 3643009 - 3643041 + T 100 -12 -4.66987 | opp_overlap 3643010 3643012, overlap 3643012 GAGGCTAACTCAGCA ACACCCGAAGCCAG TCGTT CTGGCTTCGGGTTC TTTTATTAACCTATC TERM 4909 3643040 - 3643010 - T 100 -15.5 -3.22091 | opp_overlap 3643009 3643012, overlap 3643012 AGGCTAACTCAGCAA CACCCGAAGCCAG TCGTT CTGGCTTCGGGTT CTTTTATTAACCTAT TERM 4910 3643038 - 3643012 - T 100 -18.1 -3.17319 | opp_overlap 3643009 3643012, overlap 3643010 GCTAACTCAGCAACA CCCGAAGCCAG TCGTT CTGGCTTCGGG TTCTTTTATTAACCT TERM 4911 3643012 - 3643038 + T 100 -18.1 -4.43909 | opp_overlap 3643012 3643010, overlap 3643009 GCTAACTCAGCAACA CCCGAAGCCAG TCGTT CTGGCTTCGGG TTCTTTTATTAACCT zupT 3643862 - 3643047 - | putative dioxygenase ygiE 3643978 - 3644751 + | zinc transporter TERM 4912 3644798 - 3644755 - T 71 -4.7 -4.59853 | gap 1, opp_overlap 3644766 3644795, overlap 3644758 3644760 3644761 3644763 GGAATTGGTTAAAAA CAAC-ATCAGAAGTTGTCCA GCGCA TGGACAACTTCTGCCAGCTT CACGAAAGCCTTATT TERM 4913 3644794 - 3644758 - T 90 -11 -4.40963 | opp_overlap 3644766, overlap 3644755 3644760 3644761 3644763 ATTGGTTAAAAACAA CATCAGAAGTTGTCCA GCGCA TGGACAACTTCTGCCA GCTTCACGAAAGCCT TERM 4914 3644792 - 3644760 - T 100 -13.6 -3.80746 | opp_overlap 3644766, overlap 3644758 3644755 3644761 3644763 TGGTTAAAAACAACA TCAGAAGTTGTCCA GCGCA TGGACAACTTCTGC CAGCTTCACGAAAGC TERM 4915 3644791 - 3644761 - T 100 -17.1 -2.87725 | opp_overlap 3644766, overlap 3644760 3644758 3644755 3644763 GGTTAAAAACAACAT CAGAAGTTGTCCA GCGCA TGGACAACTTCTG CCAGCTTCACGAAAG TERM 4916 3644789 - 3644763 - T 87 -13.9 -2.97636 | opp_overlap 3644766, overlap 3644761 3644760 3644758 3644755 TTAAAAACAACATCA GAAGTTGTCCA GCGCA TGGACAACTTC TGCCAGCTTCACGAA TERM 4917 3644766 - 3644786 + T 74 -9.8 -3.31322 | opp_overlap 3644763 3644761 3644760 3644758 3644755 AAAACAACATCAGAA GTTGTCCA GCGCA TGGACAAC TTCTGCCAGCTTCAC ECUMN_3528 3645003 - 3644809 - | hypothetical protein TERM 4918 3645205 - 3645184 - R 100 -5.9 -5.63236 | gap 1, opp_overlap 3645184 AGGGAAAAATAAAAA CCGAAGCCTG CTA CAA-CTTCGG TTTCTTGATTAAGGC ribB 3645894 - 3645241 - | 3,4-dihydroxy-2-butanone-4-phosphate synthase TERM 4919 3645609 - 3645637 + g 90 -10.3 -4.41206 | opp_overlap 3645614 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT TERM 4920 3646174 - 3646160 - H 71 -8.6 -3.4252 | GCGGATTCACTATAA CGCTAA TGA TTAGCG CCAGCAACGCATAGC yqiC 3646208 - 3646567 + | hypothetical protein TERM 4921 3646596 - 3646581 - T 100 -11.8 -5.16206 | opp_overlap 3646581 AAAGCAACACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT TERM 4922 3646581 - 3646596 + T 79 -11.8 -2.67055 | opp_overlap 3646581 AAAGCAACACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT glgS 3646802 - 3646602 - | putative glycogen synthesis protein yqiJ 3647071 - 3647700 + | conserved hypothetical protein; putative inner membrane protein TERM 4923 3647756 - 3647792 + G 72 -5.1 -4.4634 | overlap 3647758 TAATTCTGTGCCCTC CTGGATGTTTACCGCAA TTA TTGCCGTATGCATTCTG TTTATTATTGGAATT TERM 4924 3648058 - 3648045 - g 70 -6.7 -4.07568 | TTTGTGCGGGTAAAA CCTTC AGTT GAAGG GATTGCCACCGCCGC TERM 4925 3648958 - 3648942 - g 70 -4.4 -4.45259 | gap 1, overlap 3648943 3648952 AAAGCTGAAAAAGAA GCC-GCA GAGA TGCAGGC GGCGGCAATCGTTGA TERM 4926 3649029 - 3649017 - g 71 -9.1 -3.50853 | CTGGCGGAAGCAGAA GCGCA ACG TGCGC TGAACGACGCTATCA yqiK 3647727 - 3649388 + | hypothetical protein TERM 4927 3649407 - 3649429 + T 100 -8.4 -5.4251 | opp_overlap 3649407 CTCTTCTATGAATAA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4928 3649608 - 3649589 - T 91 -11.4 -3.71649 | opp_overlap 3649589 3649588, overlap 3649582 GGCTGAAACGGGAAA GCCCCTCC CGAA GAAGGGGC CTTATAGAAGGAAAG TERM 4929 3649784 - 3649806 + T 100 -8.4 -5.4251 | TTTCTCTATCCCACA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4930 3649985 - 3649966 - T 91 -11.4 -3.71649 | opp_overlap 3649966 3649965, overlap 3649949 3649959 GGCTGAAACGGGAAA GCCCCTCC CGAA GAAGGGGC CTTGTATAAGGAAAG TERM 4931 3650096 - 3650075 - T 71 -10.1 -2.79248 | opp_overlap 3650075 3650075, overlap 3650077 ATTAACAGCCAATCA GAGGGGGGA GAAA TCCTCCCTC ACCCTTGTTCCTTTA rfaE 3651617 - 3650184 - | fused heptose 7-phosphate kinase ; heptose 1-phosphate adenyltransferase glnE 3654505 - 3651665 - | fused deadenylyltransferase ; adenylyltransferase for glutamine synthetase TERM 4932 3653680 - 3653663 - G 70 -4 -4.65263 | ACGGCGGAAAACAAA CGGGCG CAGCAT CGCACG CAACTCGTTAGCATA TERM 4933 3653992 - 3653977 - G 77 -6.2 -4.65895 | CTGGCCAGGCAAAAA TCAGAT CGAT ATCTGA GGAGAAATTCAGTTC ygiF 3655829 - 3654528 - | putative adenylate cyclase TERM 4934 3654884 - 3654858 - G 72 -5 -4.65895 | opp_overlap 3654858, overlap 3654859 TTTGGCATCTAAAAA CGGCTGCCAGGC TTT GCTTACCAGCCA TTCGGTCAATGCCAG ECUMN_3537 3656052 - 3655846 - | hypothetical protein TERM 4935 3656503 - 3656493 - g 83 -5.4 -5.093 | GTTAAAAGAAGAAAA TCAG AAA CTGA AAAACGAGCTGATTG htrG 3656071 - 3656691 + | putative signal transduction protein (SH3 domain) TERM 4936 3656861 - 3656888 + G 100 -11.2 -4.62102 | overlap 3656862 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTTTTTCT TERM 4937 3656862 - 3656887 + G 100 -14.7 -3.34821 | overlap 3656861 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTTTTTC TERM 4938 3656960 - 3656972 + G 82 -9.1 -4.22652 | opp_overlap 3656947 3656954 AACGGAAATCCGGTT CCGGT TAC ACCGG TTTTACCTGCTATGC TERM 4939 3657163 - 3657173 + G 78 -8.2 -4.2679 | overlap 3657162 3657163 CCGTTACGCGTACTG CGCG TGG CGCG TTTTGCTGCGCGTTA TERM 4940 3657346 - 3657367 + G 75 -5.1 -4.63218 | gap 1, overlap 3657356 TTCTTCCAGGTACTG CGCG-ATTGC GGC GCACTGCGCG TTTTATTCCCGGAAA cca 3656755 - 3657993 + | fused tRNA nucleotidyl transferase ; 2'3'-cyclic phosphodiesterase and 2'nucleotidase and phosphatase bacA 3658905 - 3658084 - | undecaprenyl pyrophosphate phosphatase folB 3659364 - 3658996 - | bifunctioal dihydroneopterin aldolase ; dihydroneopterin triphosphate 2'-epimerase plsY 3659469 - 3660086 + | 1-acyl glycerol-3-phosphate synthetase component ygiP 3661031 - 3660099 - | putative DNA-binding transcriptional regulator TERM 4941 3661187 - 3661173 - H 73 -2.8 -5.06052 | opp_overlap 3661173 GCAAAAAATATAAAA CCAC ATTTTTA GTGG TAGTTTGTGGCGGTG TERM 4942 3661441 - 3661424 - g 71 -3.4 -4.76312 | GACAACATGCAAAAA GCGATC GACCTG AATCGC CCAGCCTGTCAGGAC ttdA 3661238 - 3662149 + | L-tartrate dehydratase, alpha subunit TERM 4943 3662700 - 3662685 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 3662146 - 3662751 + | L-tartrate dehydratase, beta subunit TERM 4944 3662759 - 3662779 + F 87 -8.3 -4.57073 | opp_overlap 3662752 3662753 TCAAATAACCCTCCC GGAGAGG CTCACCC CCTCTCC TTTTTCGCAGGCATA TERM 4945 3662969 - 3662998 + G 85 -11.5 -3.61983 | TGCCGGGTGCCGTGG TGGCGATGGTGGG TATC TCCATTATCGCCA TTCTCTCTCCCTTGC TERM 4946 3663205 - 3663195 - g 72 -5.4 -4.57073 | GATTCTGGTGAAAAA GATG GGG CATC GTACGCTGTTTCTCG ygjE 3662800 - 3664263 + | putative tartrate:succinate antiporter gcp 3665319 - 3664306 - | O-sialoglycoprotein endopeptidase TERM 4947 3664702 - 3664690 - G 72 -5.5 -4.50976 | overlap 3664697 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 4948 3665238 - 3665253 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 4949 3665524 - 3665507 - H 76 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3665557 - 3665772 + | 30S ribosomal subunit protein S21 TERM 4950 3665816 - 3665849 + F 82 -7.6 -4.62475 | overlap 3665820 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 4951 3665820 - 3665846 + F 90 -10.9 -4.40882 | gap 1, overlap 3665816 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 4952 3666333 - 3666318 - g 70 -3.9 -4.60487 | CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCCCGCT TERM 4953 3667215 - 3667182 - g 70 -5.9 -4.20696 | opp_overlap 3667182 3667193, overlap 3667174 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 3665883 - 3667628 + | DNA primase TERM 4954 3668596 - 3668576 - g 73 -9.1 -3.60948 | GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTGCCG rpoD 3667823 - 3669664 + | RNA polymerase, sigma 70 (sigma D) factor TERM 4955 3669738 - 3669720 - T 93 -11.7 -3.85698 | opp_overlap 3669720 GGCCCTCTGCACAAA CGCCACC TTTTC GGTGGCG TTTTTTATCGCCCAC TERM 4956 3669720 - 3669738 + T 100 -11.7 -5.24129 | opp_overlap 3669720 GGCCCTCTGCACAAA CGCCACC TTTTC GGTGGCG TTTTTTATCGCCCAC ygjF 3670249 - 3669743 - | G/U mismatch-specific DNA glycosylase TERM 4957 3670461 - 3670482 + r 100 -14.5 -5.71295 | opp_overlap 3670461 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 4958 3670482 - 3670461 - R 100 -14.5 -3.91597 | opp_overlap 3670461 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT yqjH 3671267 - 3670503 - | putative siderophore interacting protein TERM 4959 3671667 - 3671710 + G 82 -8 -4.49556 | gap 1, overlap 3671668 CATGAACACGGTCAA TGCTG-CGGTGGTCGCCACGG TCG CGGCGGCGGTCGTCGGCAGCG TTTCTTTGGTCACGG TERM 4960 3672131 - 3672116 - g 100 -3.3 -5.72622 | opp_overlap 3672123 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT yqjI 3671544 - 3672167 + | putative transcriptional regulator TERM 4961 3672207 - 3672239 + T 71 -9.1 -3.28712 | opp_overlap 3672217 3672219, overlap 3672208 CCCTACCCCCCCGTA GGCCTGATAAGATGC GCC GCATCGCATCAGGCA TTGTGCGCCAACCGC TERM 4962 3672208 - 3672238 + T 81 -12.6 -2.57132 | opp_overlap 3672217 3672219, overlap 3672207 CCTACCCCCCCGTAG GCCTGATAAGATGC GCC GCATCGCATCAGGC ATTGTGCGCCAACCG TERM 4963 3672287 - 3672316 + T 91 -11.3 -4.13767 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTTACCATCGCCGA aer 3673792 - 3672272 - | fused signal transducer for aerotaxis sensory component ; methyl accepting chemotaxis component TERM 4964 3673521 - 3673538 + g 70 -4.1 -4.59773 | opp_overlap 3673515, overlap 3673506 CGCACCCAATAATGG TCGCC ATTTTTGC GGCGA TTTTTCACGATGCCG ygjG 3674183 - 3675589 + | putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent TERM 4965 3675626 - 3675596 - T 74 -9.8 -3.37959 | opp_overlap 3675596 3675597, overlap 3675597 GAAGCGTAATATCAA GTCGAATGGCGA TACGACG TCGCCATTCGAT CTTTTTATACAATAC TERM 4966 3675596 - 3675627 + T 91 -10.3 -4.85599 | gap 1, opp_overlap 3675596 3675597, overlap 3675597 GAAGCGTAATATCAA G-TCGAATGGCGAT ACGAC GTCGCCATTCGATC TTTTTATACAATACG TERM 4967 3675625 - 3675597 - T 84 -13.3 -2.62293 | opp_overlap 3675596 3675597, overlap 3675596 AAGCGTAATATCAAG TCGAATGGCGA TACGACG TCGCCATTCGA TCTTTTTATACAATA TERM 4968 3675597 - 3675625 + T 100 -14 -4.05067 | opp_overlap 3675597 3675596, overlap 3675596 AAGCGTAATATCAAG TCGAATGGCGAT ACGAC GTCGCCATTCGA TCTTTTTATACAATA ygjH 3675963 - 3675631 - | tRNA-binding protein TERM 4969 3675826 - 3675839 + g 71 -2.3 -5.00884 | overlap 3675811 CGGCACCAGGCTGGT CACGG TTTG CAGTG TTTTTTCCCCCACAT TERM 4970 3676694 - 3676714 + G 72 -4.6 -4.64676 | opp_overlap 3676694 CGACTTCTATATCAA CCAGGGCG TTAAT CGCATTGG TTTTATTGGCGGTGA TERM 4971 3677110 - 3677090 - g 72 -6.7 -4.25104 | opp_overlap 3677103, overlap 3677091 CCTGTTGTATGAAAA GGCTCGCGA TGG TCGCGCGCT GCCGCTGTTAGTCTT TERM 4972 3677109 - 3677091 - g 70 -10.2 -3.14848 | opp_overlap 3677103, overlap 3677090 CTGTTGTATGAAAAG GCTCGCGA TGG TCGCGCGC TGCCGCTGTTAGTCT ebgR 3676182 - 3677165 + | DNA-binding transcriptional repressor TERM 4973 3677172 - 3677214 + F 85 -7.8 -4.73614 | gap 1, opp_overlap 3677179, overlap 3677173 3677174 ACCCGCTAAATCCCC TTACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC TERM 4974 3677173 - 3677213 + F 73 -9.1 -3.43084 | gap 1, opp_overlap 3677179, overlap 3677172 3677174 CCCGCTAAATCCCCT TACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCC GTTTATTTTCGTGAT TERM 4975 3677174 - 3677212 + F 81 -12.6 -2.64766 | gap 1, opp_overlap 3677179, overlap 3677173 3677172 CCGCTAAATCCCCTT ACA-CACTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGC CGTTTATTTTCGTGA TERM 4976 3677206 - 3677179 - f 93 -15.7 -2.8806 | opp_overlap 3677174 3677173 3677172 AAATCCCCTTACACA CTGTCCGGCAA TCGTTT TTGCCGGACAG TGCTGCCGTTTATTT TERM 4977 3677489 - 3677501 + G 90 -7.7 -5.00616 | GCCCTTAAGCGGTCA GTGGA ATT TCCAC TTTTTTGACCACCCG TERM 4978 3678172 - 3678159 - g 75 -4.5 -4.74103 | opp_overlap 3678159 3678167 CTGGCAATTGAAAAA CTGAC CAGC GCCAG CTTTGCGTTTACTGT TERM 4979 3678415 - 3678380 - g 72 -9.8 -3.41527 | gap 1 CAACCGCCACGACAA CGATC-ATCGCAAAGGC CGC GCCGTTGGGATGGATCG CGTCGAGAAAGATCT TERM 4980 3679312 - 3679290 - g 72 -7.6 -3.8647 | ACGCAGCAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTGCA ebgA 3677349 - 3680441 + | cryptic beta-D-galactosidase, alpha subunit TERM 4981 3680856 - 3680868 + G 72 -7.7 -3.96216 | opp_overlap 3680853 3680852 3680856 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 3680438 - 3680887 + | cryptic beta-D-galactosidase, beta subunit TERM 4982 3680927 - 3680885 - f 70 -5.5 -4.31433 | overlap 3680888 3680891 3680894 TATTTCCATAACAAA TAACAACTACGGCGGCAAA AGGAG TTTGCCGCCGCCGCTACCC TACTCATTTTCGGAG TERM 4983 3680924 - 3680888 - f 93 -11.6 -4.27512 | overlap 3680885 3680891 3680894 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCGCCGCTA CCCTACTCATTTTCG TERM 4984 3680921 - 3680891 - f 100 -13.3 -4.24183 | overlap 3680888 3680885 3680894 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCGCCG CTACCCTACTCATTT TERM 4985 3680918 - 3680894 - f 100 -15.8 -3.09866 | overlap 3680891 3680888 3680885 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCG CCGCTACCCTACTCA TERM 4986 3681650 - 3681661 + G 71 -2.2 -4.89852 | TCGTTAAAGTGATCA TCCT CGCC GGGA TTTTTATCGGTGTGC TERM 4987 3681951 - 3681939 - g 70 -4.7 -4.45664 | CGAACTTAACGAAAA CGGCG TTC CGGCG CGTGCAGCGTGGATC ygjI 3680950 - 3682383 + | putative transporter TERM 4988 3682408 - 3682444 + F 93 -11.8 -4.04922 | gap 1, opp_overlap 3682403, overlap 3682402 3682410 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAATAG TTTCTGCCTTTATAT TERM 4989 3682410 - 3682441 + F 89 -14.6 -3.05274 | opp_overlap 3682403, overlap 3682408 3682402 AAAAATGAGCAGGCA TTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAA TAGTTTCTGCCTTTA ygjJ 3682517 - 3683587 + | hypothetical protein TERM 4990 3684195 - 3684172 - g 78 -8.2 -4.15833 | gap 1 ACTACCAGCGCAAAA TCAGCGCCACC CGT GATGGC-CTGA AAGTCACCTTTGGCA ygjK 3683604 - 3685955 + | putative glycosyl hydrolase TERM 4991 3686005 - 3685957 - f 79 -11.7 -2.56164 | opp_overlap 3685985, overlap 3685956 TCCGTAAGCAGTAAT TTTTCCCGATGCCGGACGACTGT ATT ACCGCCGTCCGGCATGACGAACA GGCGTATTCTTTTTG fadH 3686126 - 3688144 + | 2,4-dienoyl-CoA reductase, NADH and FMN-linked TERM 4992 3688152 - 3688188 + T 70 -9.3 -3.18264 | overlap 3688153 AGATTTAAATCGTTA TTTGAAGCGCCGGATGC GAC GCATCCGGCACGTCGCG TTAATCAATAAACAA TERM 4993 3688153 - 3688187 + T 74 -10.6 -2.50816 | overlap 3688152 GATTTAAATCGTTAT TTGAAGCGCCGGATGC GAC GCATCCGGCACGTCGC GTTAATCAATAAACA ygjM 3688605 - 3688189 - | putative DNA-binding transcriptional regulator ygjN 3688916 - 3688602 - | hypothetical protein TERM 4994 3688981 - 3688955 - R 77 -10.2 -3.52073 | opp_overlap 3688954 3688957 TTGGCAATATGATAA CATCCGTTGACA GAT TGGCAACGAATG AATTTATCTGTGTGA TERM 4995 3689186 - 3689155 - R 100 -21.8 -2.52795 | opp_overlap 3689165 3689181, overlap 3689165 AATGTGCTGAACGTA TGCCAGATAAGGCG TTTA CGCCTTATCTGGCA GGTAGCTGCCAATCT ygjO 3690337 - 3689201 - | putative methyltransferase small domain TERM 4996 3689850 - 3689866 + g 74 -6.5 -4.58283 | CATGCCAGCGTGGTG GTGGTCG GGC CGAGCAC TTTTTCGAACAGTTC ygjP 3690422 - 3690925 + | putative metal dependent hydrolase ygjQ 3691002 - 3691685 + | putative thioredoxin-like TERM 4997 3692535 - 3692517 - g 70 -3.8 -4.65895 | opp_overlap 3692517 CTGGTGATTGAAAAA CTGTCTGA ATG CCAGAAAG TTTGCTTTGTTCCGC ygjR 3691746 - 3692750 + | putative NAD(P)-binding dehydrogenase TERM 4998 3692927 - 3692908 - f 83 -10.8 -3.66178 | opp_overlap 3692908 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4999 3692908 - 3692927 + F 100 -10.8 -5.56673 | opp_overlap 3692908 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 5000 3692966 - 3692945 - f 70 -10.1 -2.52464 | opp_overlap 3692947 TTTTGTTGTAAGTGA GACCTTGCC GGAA GGCGAGGTC TATGCATAAAAAGCA TERM 5001 3692983 - 3693008 + F 100 -13.3 -5.76633 | opp_overlap 3692982 3692980 3692983 ATGCATAAAAAGCAG CGGCTGACGTC TTCC GACGTTGGCCG TTTTTTTATGTGTAA alx 3693033 - 3693998 + | conserved hypothetical protein; putative inner membrane protein, part of terminus sstT 3694614 - 3695858 + | sodium:serine/threonine symporter TERM 5002 3695867 - 3695891 + T 100 -14.3 -4.6468 | TAATTAATTGTTTAA CCCCTTTCGTC TAC GGCGGAAGGGG TTTTCTCTACTTTAA ygjV 3696414 - 3695863 - | conserved hypothetical protein; putative inner membrane protein TERM 5003 3696470 - 3696446 - R 100 -12.9 -4.21922 | opp_overlap 3696446 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC TERM 5004 3696446 - 3696470 + r 100 -10 -5.4505 | opp_overlap 3696446 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC uxaA 3697984 - 3696497 - | altronate hydrolase TERM 5005 3696673 - 3696699 + g 77 -8.7 -4.11216 | TCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA uxaC 3699411 - 3697999 - | uronate isomerase TERM 5006 3698218 - 3698197 - G 72 -7.9 -3.95787 | opp_overlap 3698198 3698210, overlap 3698210 CAGCATACCGACAAA GCGGCTCAG CAGA CCGAGCTGC GCCAGTTGGGTCATC TERM 5007 3700752 - 3700772 + G 74 -8.9 -3.93038 | overlap 3700738 3700756 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTTAACCTG TERM 5008 3700756 - 3700768 + G 73 -9.1 -3.61589 | overlap 3700738 3700752 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTTAA exuT 3699774 - 3701192 + | hexuronate transporter TERM 5009 3701241 - 3701224 - f 93 -12.7 -3.53224 | opp_overlap 3701224 TAGTTTCCCTTCAAA GCCGCCT TCTC AGGCGGC TTTTTCATCACTGTG TERM 5010 3701224 - 3701241 + F 100 -12.7 -4.76041 | opp_overlap 3701224 TAGTTTCCCTTCAAA GCCGCCT TCTC AGGCGGC TTTTTCATCACTGTG exuR 3701322 - 3702098 + | DNA-binding transcriptional repressor TERM 5011 3702112 - 3702131 + F 86 -10.7 -3.96298 | GAAATTTCCATCCGA CAGGCGC TGCAAT GCGCCTG TTTGCTTCGTCGGTA TERM 5012 3702389 - 3702373 - f 71 -5.1 -4.48903 | opp_overlap 3702385, overlap 3702375 CAAAACATACCAAAA CAGCAAT AAC ATTGCGG TAGTGCATCTTTTAA yqjA 3702443 - 3703105 + | conserved hypothetical protein; putative inner membrane protein yqjB 3703109 - 3703492 + | conserved hypothetical protein; puttaive outer membrane protein TERM 5013 3703555 - 3703582 + F 81 -10.6 -3.48924 | opp_overlap 3703555 3703556 3703558, overlap 3703556 3703559 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG TERM 5014 3703556 - 3703581 + F 79 -11.9 -2.6914 | opp_overlap 3703556 3703555 3703558, overlap 3703555 3703559 CTGTCTATGATTAAT GAGGCGGTGGT TAAC ACTACCGCTTC GTTGTCTGGACAATC TERM 5015 3703559 - 3703578 + F 77 -10 -3.49618 | opp_overlap 3703558 3703556 3703555, overlap 3703556 3703555 TCTATGATTAATGAG GCGGTGGT TAAC ACTACCGC TTCGTTGTCTGGACA yqjC 3703639 - 3704007 + | hypothetical protein yqjD 3704045 - 3704350 + | hypothetical protein yqjE 3704353 - 3704757 + | conserved hypothetical protein; putative inner membrane protein TERM 5016 3704797 - 3704819 + G 78 -9.2 -3.88291 | opp_overlap 3704807 GCAACTGCTTAGCCA GATCCAGC AACAACG GCTGGATC TTTCTGCCAGTCGTC yqjK 3704747 - 3705046 + | hypothetical protein TERM 5017 3705057 - 3705075 + F 90 -12.4 -3.37071 | GTTAATAACCTCTCT GGCCGGAG CCA TTCCGGCC TTATCCCTCAAATTT TERM 5018 3705215 - 3705198 - f 88 -4.1 -5.60993 | overlap 3705201 3705204 CCTTGCACAAAAAAA CAATCAG CAGC CTGAGTG GCGCAGTGGAGAGTA TERM 5019 3705212 - 3705201 - f 75 -4.4 -4.89054 | overlap 3705198 3705204 TGCACAAAAAAACAA TCAG CAGC CTGA GTGGCGCAGTGGAGA TERM 5020 3705471 - 3705481 + G 82 -3.2 -5.27335 | overlap 3705469 CTGCGGGCTTTACGC TGCT GAC GGCA TTTTTATTTCACAGC yqjF 3705233 - 3705625 + | putative quinol oxidase subunit TERM 5021 3705653 - 3705670 + F 100 -11.3 -4.87626 | opp_overlap 3705653 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG TERM 5022 3705670 - 3705653 - f 100 -11.3 -5.37345 | opp_overlap 3705653 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG yqjG 3705695 - 3706681 + | S-transferase TERM 5023 3706687 - 3706704 + F 79 -11.3 -3.02459 | opp_overlap 3706687, overlap 3706682 3706679 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATTATTAGCTA TERM 5024 3706704 - 3706687 - f 100 -11.3 -5.40072 | opp_overlap 3706687 3706682 3706679 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATTATTAGCTA yhaH 3706973 - 3707338 + | conserved hypothetical protein; putative inner membrane protein TERM 5025 3707352 - 3707374 + F 93 -10.6 -4.50583 | AAAACAAATCTGCTC GCCGGATG TCTGACT CATCCGGC TTTTATCATCATGTT yhaI 3707580 - 3707936 + | conserved hypothetical protein; putative inner membrane protein TERM 5026 3707966 - 3707945 - f 72 -5.7 -4.47307 | opp_overlap 3707947, overlap 3707946 3707947 AAATTAATATTAAAA TTGGGGCGA TATT TCGCCCCTT GTTAGGTGATGCTGC TERM 5027 3707965 - 3707946 - f 70 -9.2 -3.26758 | opp_overlap 3707947, overlap 3707945 3707947 AATTAATATTAAAAT TGGGGCGA TATT TCGCCCCT TGTTAGGTGATGCTG TERM 5028 3707947 - 3707964 + F 95 -12.7 -3.69663 | opp_overlap 3707946 3707945 3707947 ATTAATATTAAAATT GGGGCGA TATT TCGCCCC TTGTTAGGTGATGCT TERM 5029 3707964 - 3707947 - f 81 -12.7 -2.5497 | opp_overlap 3707947, overlap 3707946 3707945 ATTAATATTAAAATT GGGGCGA TATT TCGCCCC TTGTTAGGTGATGCT insA 3708026 - 3708301 + | IS1 repressor protein InsA insB 3708220 - 3708723 + | IS1 transposase InsAB'; CP4-6 prophage yhaJ 3709660 - 3708764 - | putative DNA-binding transcriptional regulator yhaK 3709765 - 3710466 + | putative pirin-related protein yhaL 3710489 - 3710653 + | hypothetical protein yhaM 3712096 - 3710786 - | hypothetical protein TERM 5030 3711502 - 3711491 - G 75 -7.2 -4.36206 | opp_overlap 3711496 AGAATCGAGAATAAA GCGG ATCG CCGC AAACGGGACTTCATT TERM 5031 3712119 - 3712105 - R 70 -2.8 -4.90217 | CAAACATATTAAAAA CCTTAA AAT TTCAGG TAAATCAAGAAAATG yhaO 3713392 - 3712124 - | putative transporter TERM 5032 3713706 - 3713689 - R 100 -11.3 -6.26417 | GATCACAAAAAAAAA GGTGCAC ATTT GTGCACC CAATGATGAAAGCTG TERM 5033 3713735 - 3713718 - R 79 -9.9 -3.84961 | overlap 3713730 CACCCAATGATGAAA GCTGACA GTAA TGTCAGC CGCAGACCACTTTAA tdcG 3715095 - 3713731 - | L-serine dehydratase 3 TERM 5034 3715160 - 3715126 - R 79 -11.5 -3.05384 | gap 1, opp_overlap 3715139 3715140, overlap 3715140 TTGCCGTTCAGTGAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCTTTACGCACT tdcF 3715556 - 3715167 - | L-PSP (mRNA) endoribonuclease tdcE 3717864 - 3715570 - | pyruvate formate-lyase 4/2-ketobutyrate formate-lyase TERM 5035 3716060 - 3716082 + g 70 -5.5 -4.33854 | GACTGGGTAGGGACG GCGTTGCGA TAGGT TGGCAGCGC TTTAATTTTCTTCAT TERM 5036 3717460 - 3717491 + g 81 -8.8 -4.35461 | gap 1 ATATTCAAATTCACT GTCCATTTCACGGCC ATA GGC-GTGGAATGAAC TTTTAATCATATTAA tdcD 3719118 - 3717898 - | propionate kinase/acetate kinase C, anaerobic TERM 5037 3718932 - 3718962 + g 70 -11 -2.74144 | overlap 3718932 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA TERM 5038 3718932 - 3718963 + g 73 -9.4 -3.57263 | gap 1, overlap 3718932 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT tdcC 3720463 - 3719132 - | L-threonine/L-serine transporter tdcB 3721474 - 3720485 - | catabolic threonine dehydratase, PLP-dependent TERM 5039 3720537 - 3720558 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA tdcA 3722511 - 3721573 - | DNA-binding transcriptional activator tdcR 3722688 - 3723044 + | Threonine dehydratase operon activator protein yhaB 3723300 - 3723839 + | hypothetical protein TERM 5040 3723815 - 3723829 + F 76 -2.9 -5.23396 | CTTTTTTTCACCCGA TCATT TTAAT AATGA TTTTTATTGATTATT TERM 5041 3724527 - 3724504 - g 77 -6.8 -4.58663 | ATTATTTGCTAAAAA TAACGCCTGT TATA ACAAGCATTA ACGATATGTATTCTG yhaC 3723861 - 3725048 + | hypothetical protein TERM 5042 3725148 - 3725121 - T 100 -15 -4.58663 | opp_overlap 3725128, overlap 3725110 3725128 ACTATGCTCCAAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAATCAGGTGAAA TERM 5043 3725141 - 3725128 - T 100 -9.5 -5.18355 | opp_overlap 3725128, overlap 3725121 TCCAAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA TERM 5044 3725128 - 3725141 + T 91 -9.5 -4.67353 | opp_overlap 3725128 3725121 TCCAAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA garK 3726791 - 3725565 - | glycerate kinase I TERM 5045 3726733 - 3726744 + g 75 -7.2 -4.34263 | opp_overlap 3726733 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 3727697 - 3726807 - | tartronate semialdehyde reductase TERM 5046 3727367 - 3727381 + g 77 -10 -3.57561 | overlap 3727361 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA TERM 5047 3727624 - 3727638 + g 73 -4.2 -4.81685 | opp_overlap 3727624 ACCACCAGCGAGTAA CCTGCT TTC AGAAGG TTTTTACTCATTGGT garL 3728497 - 3727727 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase garP 3729847 - 3728513 - | putative (D)-galactarate transporter TERM 5048 3729147 - 3729161 + g 76 -4.2 -4.9218 | TTGGGACCGCTTGCT GCCG CACTGCC CGGC TTTTTATGGTCCATA garD 3730222 - 3731793 + | (D)-galactarate dehydrogenase TERM 5049 3731820 - 3731837 + F 91 -7 -5.38549 | opp_overlap 3731820 ACGTCCCTCGCAAAA CATGGC CTTAGT GCCATG TTTTTATTGTTTAAA TERM 5050 3731837 - 3731820 - f 70 -7 -4.07687 | opp_overlap 3731820 ACGTCCCTCGCAAAA CATGGC CTTAGT GCCATG TTTTTATTGTTTAAA sohA 3731942 - 3732277 + | putative regulator TERM 5051 3732694 - 3732683 - g 81 -5.8 -4.7416 | GCAAAATGTTAAAAA GAGG ACAT CCTC CTGCCGACTGGGAAA yhaV 3732277 - 3732741 + | hypothetical protein agaR 3733605 - 3732796 - | DNA-binding transcriptional dual regulator kbaZ 3733854 - 3735134 + | tagatose 6-phosphate aldolase 1, kbaZ subunit agaV 3735157 - 3735630 + | N-acetylgalactosamine-specific enzyme IIB component of PTS ECUMN_3616 3735641 - 3736420 + | putative enzyme IIC component of PTS ECUMN_3617 3736404 - 3737288 + | putative hexose/hexosamine family PTS permease IID component ECUMN_3618 3737306 - 3737740 + | putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component) TERM 5052 3738152 - 3738139 - g 70 -5.2 -4.30987 | opp_overlap 3738144, overlap 3738141 ACGCCGCAGAATAAA GGCG CGCATC CGCC GGAGCTGTTTCGCGA agaA 3737716 - 3738870 + | N-acetylglucosamine-6-phosphate deacetylase (GlcNAc 6-P deacetylase) TERM 5053 3738889 - 3738912 + F 74 -3.2 -5.12987 | gap 1 TTTGCTCCTTTATTG GGCCTTCAC TTCCCCC GT-AAGGCC TTTCTTTTTCTTTCG TERM 5054 3738955 - 3738968 + F 72 -8.1 -3.9392 | overlap 3738953 3738952 CAGGGTATCGGATGC GACGC TGAC GCGTC TTCTTTGACCTACGG agaS 3739220 - 3740374 + | tagatose-6-phosphate ketose/aldose isomerase kbaY 3740387 - 3741247 + | tagatose 6-phosphate aldolase 1, kbaY subunit TERM 5055 3741275 - 3741304 + F 70 -9.3 -3.21099 | opp_overlap 3741279, overlap 3741276 3741279 TATGATTTATCCCAA TGTACTTCCCGAT TAAT ATCGGGGAGTGCC TTAATGGTAAAGGAG TERM 5056 3741276 - 3741303 + F 81 -12.8 -2.52516 | opp_overlap 3741279, overlap 3741275 3741279 ATGATTTATCCCAAT GTACTTCCCGAT TAAT ATCGGGGAGTGC CTTAATGGTAAAGGA TERM 5057 3741279 - 3741300 + F 74 -10.9 -2.57795 | opp_overlap 3741279, overlap 3741276 3741275 ATTTATCCCAATGTA CTTCCCGAT TAAT ATCGGGGAG TGCCTTAATGGTAAA agaB 3741414 - 3741890 + | N-acetylgalactosamine-specific enzyme IIB component of PTS TERM 5058 3741999 - 3742009 + G 81 -6.8 -4.63592 | TGGGGATTGATTTTT GGCT GGA AGCC TTATTTTTATTCCGC agaC 3741929 - 3742732 + | N-acetylgalactosamine-specific enzyme IIC component of PTS agaD 3742722 - 3743513 + | N-acetylgalactosamine-specific enzyme IID component of PTS TERM 5059 3743551 - 3743515 - g 78 -10.8 -3.55444 | opp_overlap 3743521, overlap 3743516 3743520 3743523 TCGGCATTTTGTAAA TGGAACGAGGCACCGC GTCTG GCGGTGCCTCTTTACT TAAGGAATTTCATCC TERM 5060 3743550 - 3743516 - g 85 -14.3 -2.73124 | opp_overlap 3743521, overlap 3743515 3743520 3743523 CGGCATTTTGTAAAT GGAACGAGGCACCGC GTCTG GCGGTGCCTCTTTAC TTAAGGAATTTCATC TERM 5061 3743546 - 3743520 - g 95 -13.7 -3.27704 | opp_overlap 3743521, overlap 3743516 3743515 3743523 ATTTTGTAAATGGAA CGAGGCACCGC GTCTG GCGGTGCCTCT TTACTTAAGGAATTT TERM 5062 3743521 - 3743545 + G 100 -17.2 -3.90856 | opp_overlap 3743520 3743516 3743515 3743523 TTTTGTAAATGGAAC GAGGCACCGC GTCTG GCGGTGCCTC TTTACTTAAGGAATT TERM 5063 3743543 - 3743523 - g 85 -14 -2.81888 | opp_overlap 3743521, overlap 3743520 3743516 3743515 TTGTAAATGGAACGA GGCACCGC GTCTG GCGGTGCC TCTTTACTTAAGGAA TERM 5064 3743740 - 3743722 - g 82 -3 -5.24531 | opp_overlap 3743726 ATCTGGTAGAAAAAA TCCACCAG CAG CAGGTTGA TGTCAGCCAGCTCAC agaI 3743514 - 3744281 + | galactosamine-6-phosphate isomerase yraL 3745194 - 3744331 - | putative methyltransferase TERM 5065 3744395 - 3744411 + g 83 -6.5 -5.00616 | overlap 3744393 3744405 ACGCCGTGAATTTCT GCGGC CAGCGCC GCCGC TTTTTTCAGCGGCAG TERM 5066 3745254 - 3745243 - H 89 -3 -5.75945 | ATTGCGTAAAAAAAA TATC ACTG GATA CATTATGGTACCCTC TERM 5067 3745675 - 3745657 - gH 78 -5.3 -4.79955 | opp_overlap 3745664 3745667, overlap 3745637 3745635 3745633 AGATTTAGAACAAAA CCAGCAA GCGCG TTACTGG CAGGCAAAAATCGAT TERM 5068 3746213 - 3746190 - gH 72 -8.8 -3.5764 | gap 1, opp_overlap 3746198 AACCTCAGCCGCAAA CCGTGGATGGC GTT GCCAGCC-CGG CACAAGCCTCGGTTA yraM 3745259 - 3747295 + | hypothetical protein yraN 3747253 - 3747648 + | hypothetical protein yraO 3747668 - 3748258 + | DnaA initiator-associating factor for replication initiation ecfH 3748268 - 3748843 + | conserved hypothetical protein; putative periplasmic or secreted lipoprotein yraQ 3750005 - 3748965 - | putative permease yraR 3750713 - 3750078 - | putative nucleoside-diphosphate-sugar epimerase TERM 5069 3751304 - 3751282 - g 79 -9.8 -3.85698 | overlap 3751284 GTGGTGGTCGATAAA GATCAGCTGG TTA CCAGCCGAAC GCCGGACGATCTGCC TERM 5070 3751302 - 3751284 - g 78 -11 -3.51934 | overlap 3751282 GGTGGTCGATAAAGA TCAGCTGG TTA CCAGCCGA ACGCCGGACGATCTG yhbO 3750841 - 3751359 + | putative intracellular protease yhbP 3751782 - 3751339 - | hypothetical protein TERM 5071 3751620 - 3751630 + g 74 -8.2 -3.87914 | overlap 3751621 GCGGCCCACTCATCT GCGC GTG GCGC GTTTTTTCTTCCGTC TERM 5072 3751621 - 3751631 + g 100 -8.2 -5.4833 | overlap 3751620 CGGCCCACTCATCTG CGCG TGG CGCG TTTTTTCTTCCGTCA yhbQ 3751833 - 3752135 + | putative endonuclease yhbS 3752625 - 3752122 - | putative acyltransferase with acyl-CoA N-acyltransferase domain yhbT 3753143 - 3752619 - | putative lipid carrier protein TERM 5073 3753758 - 3753780 + G 90 -13.4 -3.43676 | GCCATTTTGACGTTG CACGCGTGGT GCT GCCGCGCGTG TTGTCGATTCATCAG yhbU 3753352 - 3754347 + | peptidase (collagenase-like) TERM 5074 3755162 - 3755150 - g 86 -9.1 -4.4078 | CCGCGCCAATGAAAA TGGCG CTG CGCCA CTGCCGTTGACGGCA yhbV 3754356 - 3755234 + | protease yhbW 3755315 - 3756322 + | putative enzyme ECUMN_3641 3757019 - 3756300 - | hypothetical protein TERM 5075 3756330 - 3756366 + g 91 -5.1 -5.42259 | opp_overlap 3756331, overlap 3756331 TGGGCTGATTTTATA ACGCCGGTTTTCAAC GGTGATG GTTGGCAATCGGCGA TTTTTTTCAAAGTAA TERM 5076 3756331 - 3756365 + g 72 -8.6 -3.84633 | opp_overlap 3756331, overlap 3756330 GGGCTGATTTTATAA CGCCGGTTTTCAAC GGTGATG GTTGGCAATCGGCG ATTTTTTTCAAAGTA TERM 5077 3756430 - 3756442 + g 78 -9.1 -3.97413 | overlap 3756428 TATTCCGGCCATACC TGCGC CTG GCGCA TATTTTCTTCGTCCA TERM 5078 3756874 - 3756864 - G 70 -6.8 -4.07535 | AATGCGGATAAATAA CTGG TCA CCAG GATGAATGATTTTTA ECUMN_3642 3757177 - 3757707 + | putative cytoplasmic protein TERM 5079 3757735 - 3757759 + T 77 -11.5 -2.79684 | opp_overlap 3757733 TACTTGTGAATTATT GCCGGATGA AAACTGC TCATCCGGC TCGTTCAATTACTGA mtr 3759012 - 3757768 - | tryptophan transporter of high affinity TERM 5080 3758118 - 3758102 - G 70 -4.3 -4.48902 | AGATAGTCAAACAAA CCCAGCG TTA CGCCAAG GAACGAACTTGCTAC TERM 5081 3758985 - 3758958 - G 76 -10.6 -3.28712 | gap 1, opp_overlap 3758957 3758977 TGGTGCCGCCGATAA TCACCA-CGCCGC CAA GCAGCGACGGTGA CGTTTGGGTGGTGGT TERM 5082 3759122 - 3759100 - R 100 -10.6 -5.82281 | opp_overlap 3759098 3759096 3759094 3759100 AAAGACAGAAAAAAA GCCCCGAT GGTAAAA ATCGGGGC TGTATATATTATTTT TERM 5083 3759100 - 3759122 + r 78 -10.6 -3.17888 | opp_overlap 3759100, overlap 3759098 3759096 3759094 AAAGACAGAAAAAAA GCCCCGAT GGTAAAA ATCGGGGC TGTATATATTATTTT deaD 3761133 - 3759166 - | ATP-dependent RNA helicase TERM 5084 3761212 - 3761187 - R 72 -7.5 -4.04023 | overlap 3761188 ATTAACGAACAACAA CGCCCTCACCC GTTA AGGTGATGGCA ATCAAAAAAGATTAC nlpI 3762131 - 3761247 - | lipoprotein precursor TERM 5085 3762228 - 3762207 - R 100 -15.1 -4.07568 | CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC pnp 3764444 - 3762240 - | polynucleotide phosphorylase/polyadenylase TERM 5086 3764583 - 3764601 + r 77 -7.3 -4.38712 | opp_overlap 3764584, overlap 3764584 CGTCAGCTTGAAAAA AGGGGCC ACTCA GGCCCCC TTTTCTGAAACTCGC TERM 5087 3764584 - 3764600 + r 78 -10.8 -3.22906 | opp_overlap 3764584, overlap 3764583 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG TERM 5088 3764600 - 3764584 - R 100 -10.8 -5.03314 | opp_overlap 3764584 3764583 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG rpsO 3764891 - 3764622 - | 30S ribosomal subunit protein S15 TERM 5089 3764726 - 3764747 + g 85 -2.9 -5.34555 | opp_overlap 3764728, overlap 3764728 3764729 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC truB 3765984 - 3765040 - | tRNA pseudouridine synthase rbfA 3766385 - 3765984 - | 30s ribosome binding factor TERM 5090 3766323 - 3766334 + g 75 -4.4 -4.82855 | overlap 3766315 TTCACGCTGCAGGAT GAGA GCGA TCTC TTTTTGCATTTCCTG TERM 5091 3766421 - 3766408 - R 100 -9.5 -5.24129 | opp_overlap 3766408 TCTCCTGACAAAAAA GGGGC CATA GCCCC TTTTAAAATTAATCT TERM 5092 3766408 - 3766421 + r 84 -9.5 -4.21098 | opp_overlap 3766408 TCTCCTGACAAAAAA GGGGC CATA GCCCC TTTTAAAATTAATCT infB 3769216 - 3766544 - | translation initiation factor IF-2 nusA 3770728 - 3769241 - | transcription termination/antitermination L factor TERM 5093 3769382 - 3769372 - G 74 -8.2 -3.89346 | opp_overlap 3769377, overlap 3769373 CTTCCAGCGTACAAA CGCC ACG GGCG GCCAGTTTGAATGCC TERM 5094 3769475 - 3769493 + g 82 -7.4 -4.57569 | TTCTTCCTGGGCCTG TGCAATGG TGG CCAGTGCA TTTTTAGCACGCTCG yhbC 3771208 - 3770756 - | hypothetical protein TERM 5095 3771245 - 3771233 - H 100 -6.9 -5.80248 | opp_overlap 3771232 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 5096 3771273 - 3771290 + H 70 -6.9 -4.0641 | opp_overlap 3771274, overlap 3771274 GTCAGATAACAAAAA ACCCCGA TAAA TCGGGGC TTTATATAACTGAAC TERM 5097 3771289 - 3771274 - H 100 -10.4 -5.60689 | opp_overlap 3771273 3771274 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 5098 3771274 - 3771289 + H 73 -10.4 -3.03525 | opp_overlap 3771274, overlap 3771273 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA argG 3771839 - 3773182 + | argininosuccinate synthetase TERM 5099 3773194 - 3773214 + T 70 -8.9 -3.25356 | opp_overlap 3773194, overlap 3773208 GTAATTCGACATCAA CCCTGCCCT TCA GGGGTGGGG TTACCTTGCTTATCC yhbX 3774815 - 3773190 - | putative hydrolase, inner membrane TERM 5100 3775267 - 3775236 - R 90 -11 -4.32436 | opp_overlap 3775242 3775244, overlap 3775237 3775244 AGACCAGGACCAAAA CGAAAAAAGACGCT TTTC AGCGTCTCTTTTCT GGAATTTGGTACCGA TERM 5101 3775266 - 3775237 - R 95 -14.5 -3.18738 | opp_overlap 3775242 3775244, overlap 3775236 3775244 GACCAGGACCAAAAC GAAAAAAGACGCT TTTC AGCGTCTCTTTTC TGGAATTTGGTACCG TERM 5102 3775242 - 3775261 + r 76 -6.4 -4.44974 | opp_overlap 3775237 3775236 3775244, overlap 3775244 GGACCAAAACGAAAA AAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 5103 3775259 - 3775244 - R 100 -9 -5.48054 | opp_overlap 3775242 3775244, overlap 3775237 3775236 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT TERM 5104 3775244 - 3775259 + r 77 -9 -3.82551 | opp_overlap 3775244 3775237 3775236, overlap 3775242 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT TERM 5105 3775399 - 3775421 + r 79 -7.7 -4.32607 | overlap 3775417 GATATCGCTGGTCGG CTTAGCCGG AGCAG CTGGCTGAG TTTGTTCGGTTTTCG secG 3775707 - 3775375 - | preprotein translocase membrane subunit TERM 5106 3775887 - 3775865 - R 81 -3.5 -5.41746 | gap 1 AACTGCGGAAAAAAA CAGCAAA-AC TGAT GTGTTCGCTG AGAAAAAAGGCGACA TERM 5107 3775911 - 3775896 - R 91 -8.2 -5.24129 | opp_overlap 3775896 TTCGCTGAGAAAAAA GGCGAC AACC GCCGCC TTTTTAGCCAGTTAT TERM 5108 3775896 - 3775911 + r 78 -6 -4.60255 | opp_overlap 3775896 TTCGCTGAGAAAAAA GGCGAC AACC GCCGCC TTTTTAGCCAGTTAT glmM 3777272 - 3775935 - | phosphoglucosamine mutase folP 3778113 - 3777265 - | 7,8-dihydropteroate synthase TERM 5109 3778167 - 3778148 - R 100 -12.8 -5.56673 | opp_overlap 3778148 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA TERM 5110 3778148 - 3778167 + r 88 -10.6 -4.18494 | opp_overlap 3778148 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA ftsH 3780137 - 3778203 - | protease, ATP-dependent zinc-metallo rrmJ 3780866 - 3780237 - | 23S rRNA methyltransferase TERM 5111 3781033 - 3781016 - g 90 -4.9 -5.34309 | gap 1, overlap 3781021 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG yhbY 3780992 - 3781285 + | putative RNA-binding protein TERM 5112 3781371 - 3781398 + T 93 -13.6 -3.25946 | gap 1, opp_overlap 3781378, overlap 3781378 CACGCTCTGTTCGTT GATAAAAGGCCGC ATA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 5113 3781378 - 3781392 + T 100 -12.8 -5.13137 | opp_overlap 3781378, overlap 3781371 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA TERM 5114 3781392 - 3781378 - T 100 -12.8 -4.36914 | opp_overlap 3781378 3781371 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA greA 3781917 - 3781441 - | transcription elongation factor TERM 5115 3781479 - 3781490 + g 72 -7.2 -4.25104 | CTTCAAATTCTACTT CGCC GCCC GGCG TTTTGATGACCACAA TERM 5116 3782050 - 3782019 - H 100 -5.2 -5.68023 | gap 1, overlap 3782021 CCAGAAGCAAAAAAA TA-CCGACCCGGG TACAAGT CCCAGGTCAGCTA CAATTCACATTTTGA TERM 5117 3782047 - 3782021 - H 89 -9.4 -4.46828 | overlap 3782019 AGAAGCAAAAAAATA CCGACCCGGG TACAAGT CCCAGGTCAG CTACAATTCACATTT dacB 3782165 - 3783598 + | D-alanyl-D-alanine carboxypeptidase TERM 5118 3783628 - 3783610 - T 100 -13.1 -4.46854 | opp_overlap 3783610 TTAGTCAATAAGAAA CCCCGGC ACATG GCCGGGG TTTTGCTGATTAACG TERM 5119 3783610 - 3783628 + T 100 -13.1 -4.3534 | opp_overlap 3783610 TTAGTCAATAAGAAA CCCCGGC ACATG GCCGGGG TTTTGCTGATTAACG obgE 3784810 - 3783638 - | GTPase involved in cell partioning and DNA repair TERM 5120 3783988 - 3784004 + g 72 -7.9 -3.91506 | opp_overlap 3783975, overlap 3783986 3783990 ACCAACGCGGTTTCG CTGCCAG ATC CTGGCTG TATTTTTCCAGCTCG TERM 5121 3783990 - 3784002 + g 71 -9.1 -3.54256 | overlap 3783988 3783986 CAACGCGGTTTCGCT GCCAG ATC CTGGC TGTATTTTTCCAGCT yhbE 3785791 - 3784826 - | conserved hypothetical protein; putative inner membrane protein TERM 5122 3785058 - 3785021 - G 76 -9.1 -3.74198 | gap 1, overlap 3785014 AAAAAACAGCGTAAA CAGTG-GGGTGAGCGTGA TGA TCGCGCTCACCTGCGCTG CCTGCCAGCGAGCCA TERM 5123 3785889 - 3785868 - R 100 -15.9 -4.75174 | opp_overlap 3785868 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG TERM 5124 3785868 - 3785889 + r 100 -15.9 -3.794 | opp_overlap 3785868 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG rpmA 3786175 - 3785918 - | 50S ribosomal subunit protein L27 rplU 3786507 - 3786196 - | 50S ribosomal subunit protein L21 TERM 5125 3787305 - 3787277 - g 70 -5.1 -4.3586 | opp_overlap 3787295 TTATCTATAGCAAAA CCGCGCGTCTG TTTGAGG CTGCCGCGCAG TGTTCCGGGATTCTG TERM 5126 3787453 - 3787443 - g 81 -6.8 -4.67755 | ACAGTTAGGTAAAAA CGTC GGC GACG ATCTGAACGAAGGTA ispB 3786766 - 3787737 + | octaprenyl diphosphate synthase TERM 5127 3787751 - 3787769 + F 100 -16 -2.7386 | AATCCCCTCCCCTCA TCCCGCGC AGC GCGCGGGA TGATTCCAGTAAATT sfsB 3787964 - 3788242 + | DNA-binding transcriptional activator of maltose metabolism murA 3789549 - 3788290 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 5128 3789047 - 3789069 + g 86 -10.6 -3.92075 | opp_overlap 3789045 GCAGCACACATGATG GTCACCGTTG CGC CAACGCTGAC TTTATCCATCACGAT yrbA 3789858 - 3789604 - | putative DNA-binding transcriptional regulator TERM 5129 3789697 - 3789723 + g 74 -2.9 -5.00884 | gap 1, overlap 3789703 ATCCGCAATATATTC CATCAG-CGGCC CATA GACCGTCTGCTG TTTTTTAACCCGACT TERM 5130 3789958 - 3789934 - R 86 -7.2 -5.05712 | gap 1, overlap 3789953 ATAAATAAGCAAAAA GCCTCG-CTGA TAAA TCAGACAAGGC TCGACTTGCAGGCAG yrbB 3790310 - 3790017 - | hypothetical protein yrbC 3790945 - 3790310 - | toluene transporter subunit: membrane component of ABC superfamily yrbD 3791515 - 3790964 - | toluene transporter subunit: membrane component of ABC superfamily yrbE 3792302 - 3791520 - | toluene transporter subunit: membrane component of ABC superfamily yrbF 3793119 - 3792310 - | toluene transporter subunit: ATP-binding component of ABC superfamily TERM 5131 3794052 - 3794039 - g 72 -6.7 -4.24002 | TCGCAAAGGTGAAAA CGACA TTGC TGTCG GAAACATCATTGGCG TERM 5132 3794167 - 3794178 + G 70 -4.4 -4.47888 | ACTACAGCGTGATGT TGCT GGTG AGCA TTATTTTTGCGTTGC yrbG 3793329 - 3794306 + | putative calcium/sodium:proton antiporter TERM 5133 3795236 - 3795254 + G 84 -11 -3.79138 | ATATCACCTCCGTGA TGGTTGCC GAT GGCGACCA TTTACTCGGTGTGTT kdsD 3794320 - 3795306 + | D-arabinose 5-phosphate isomerase kdsC 3795327 - 3795893 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 5134 3795982 - 3795971 - gf 70 -3.6 -4.59511 | AATATGGCCGAAAAA GACG ATAC CGCC CAGGTGGTCGTCAAC yrbK 3795890 - 3796465 + | hypothetical protein TERM 5135 3796973 - 3796959 - gf 71 -3.4 -4.80417 | overlap 3796960 GACAAAAACAACAAA GGCCAG ACC CCGGCA CAGAAGAAGGGTAAT lptA 3796434 - 3796991 + | putative lipopolysaccharide transport protein A: periplasmic-binding component of ABC superfamily lptB 3796998 - 3797723 + | putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily TERM 5136 3798406 - 3798396 - g 75 -6.8 -4.42788 | opp_overlap 3798405 CCCAATTCGATAAAA CCAC GCC GTGG CTGGAAGAGGCCAGA rpoN 3797771 - 3799204 + | RNA polymerase, sigma 54 (sigma N) factor yhbH 3799227 - 3799514 + | ribosome-associated, sigma 54 modulation protein TERM 5137 3799542 - 3799568 + F 100 -13 -3.93236 | overlap 3799543 TTAGCATGTGCATGG CGGCCTGTTGTG CGG CACAACGGGCCA TTTGTACGGTTAATG TERM 5138 3799543 - 3799567 + F 100 -16.5 -2.95459 | overlap 3799542 TAGCATGTGCATGGC GGCCTGTTGTG CGG CACAACGGGCC ATTTGTACGGTTAAT TERM 5139 3799767 - 3799779 + G 81 -6.9 -4.61231 | AAACAACTTAGTCTG CCGCC TCA GGTGG TTTTTGAAGCTATCC TERM 5140 3799877 - 3799887 + G 81 -8.2 -4.42238 | overlap 3799878 3799882 AGAAGATACTCTTCG CGCC GTT GGCG TTTTCGTTCAGCTCG ptsN 3799632 - 3800123 + | sugar-specific enzyme IIA component of PTS TERM 5141 3800177 - 3800163 - f 76 -8.6 -3.96148 | CGTTGTGAGGAGAAA CAGTAC ATG GTACTG ATGATCGTCAGCGGA yhbJ 3800169 - 3801023 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 5142 3801077 - 3801052 - g 88 -11.1 -4.13654 | overlap 3801055 TGTTGAAATCACAAA CAAGCTGGGCA TGCA TGCCCGGCCTG CAATGAAGCTGTTTG TERM 5143 3801074 - 3801055 - g 82 -9.2 -4.1851 | overlap 3801052 TGAAATCACAAACAA GCTGGGCA TGCA TGCCCGGC CTGCAATGAAGCTGT npr 3801020 - 3801292 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 5144 3801280 - 3801301 + F 71 -10.3 -2.79671 | overlap 3801279 CTTTAACTCTGGTTT TGATGAAGA TTAA TCTTCATCA CTTTGACATTCAAAT yrbL 3801505 - 3802137 + | hypothetical protein mtgA 3802862 - 3802134 - | biosynthetic peptidoglycan transglycosylase elbB 3803512 - 3802859 - | isoprenoid biosynthesis protein with amidotransferase-like domain TERM 5145 3803722 - 3803744 + r 83 -5.4 -5.19261 | overlap 3803723 3803725 TGGCGCAGTATTCGC GCACCCCGGT CTA GCCGGGGTCA TTTTTTAGTGGCTTT TERM 5146 3803723 - 3803743 + r 75 -8.9 -3.6993 | overlap 3803722 3803725 GGCGCAGTATTCGCG CACCCCGGT CTA GCCGGGGTC ATTTTTTAGTGGCTT TERM 5147 3803725 - 3803741 + r 83 -11.5 -3.41701 | overlap 3803723 3803722 CGCAGTATTCGCGCA CCCCGGT CTA GCCGGGG TCATTTTTTAGTGGC arcB 3806078 - 3803742 - | hybrid sensory histidine kinase in two-component regulatory system with ArcA TERM 5148 3804139 - 3804155 + g 70 -6.5 -4.2704 | GTACTTTCCTCATCA TCCTGGG TAT CCCAGAA TTTCTTGATCATCGC TERM 5149 3805475 - 3805499 + g 74 -2.8 -4.92239 | CCGGTGAGTAAACAT CAGCAGGTTT CAGGT GAACCAGTTG TTTTTCGCTTTTTCC yhcC 3807103 - 3806174 - | putative Fe-S oxidoreductase TERM 5150 3806547 - 3806520 - G 73 -11.3 -2.60615 | overlap 3806519 3806517 AGCGTTTGCAAACAT TCAGCCTGCCC TTCGCC AGGCAGGCCGA CAATTAAGTGGGAAC TERM 5151 3807581 - 3807601 + H 71 -8.3 -3.54 | overlap 3807580 3807582 3807584 CGCTGGAAGCTTTCT GGATGAGCA GCC TGCTCATCA TATTTATGCAGTAAT TERM 5152 3807582 - 3807600 + H 79 -11.8 -2.71918 | overlap 3807581 3807580 3807584 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 5153 3808351 - 3808369 + G 70 -4.5 -4.56961 | gap 1, overlap 3808355 TAAAGGTCTGTGTAT GC-CGGCG GATC TGCCGCGC TTTTATCTGGATCTT TERM 5154 3808956 - 3808943 - g 72 -5.2 -4.58283 | GAAGTGGTCGAAAAA GGCC GCGTCG GGCC AGGCGAACTGATGGT TERM 5155 3811417 - 3811390 - g 70 -6.2 -4.1899 | opp_overlap 3811412, overlap 3811393 CTACTGCACCGAAAA CAACCCGCCGTT TGAT AACGGCCTGCTG AACGCGCAGTTGCTG gltB 3807686 - 3812239 + | glutamate synthase, large subunit TERM 5156 3812712 - 3812696 - g 74 -2.1 -5.04385 | opp_overlap 3812706, overlap 3812698 CAGACCGGTAAAAAA GTGGCGA TTA TCGGCGC AGGCCCGGCGGGTCT TERM 5157 3812782 - 3812765 - g 70 -6.9 -4.11484 | overlap 3812766 CGCAACGGCGTAAAA GCGGTCG TCTT CGACCGT CACCCGGAAATTGGC TERM 5158 3813026 - 3813004 - g 74 -7.6 -4.07568 | overlap 3813010 CGGCGGGCTGGAAAA CGAAGACGCC GAT GGCGTATACG CAGCGCTGCCGTTCC gltD 3812252 - 3813670 + | glutamate synthase, 4Fe-4S protein, small subunit TERM 5159 3814180 - 3814158 - g 100 -16.4 -3.6106 | TTCAACATGTTGAAA TTCGCCAGAC AGT GTCTGGCGAA TTAACACCATTGGGA TERM 5160 3814231 - 3814185 - g 100 -15.2 -3.33696 | overlap 3814187 TGTCTGGCGAATTAA CACCATTGGGAATGCCGCAGAC ACC GTCTGCAGAATTCCCATCGGCA AAGATTTGGCAGACG TERM 5161 3814229 - 3814187 - g 100 -17.8 -3.23853 | overlap 3814185 TCTGGCGAATTAACA CCATTGGGAATGCCGCAGAC ACC GTCTGCAGAATTCCCATCGG CAAAGATTTGGCAGA TERM 5162 3814234 - 3814260 + G 100 -18.2 -3.57462 | opp_overlap 3814234 ATTCCCATCGGCAAA GATTTGGCAGAC GCT GTCTGCCAAATC TTTCCCCCTGCCCTG TERM 5163 3814260 - 3814234 - g 100 -18.2 -3.57263 | opp_overlap 3814234 ATTCCCATCGGCAAA GATTTGGCAGAC GCT GTCTGCCAAATC TTTCCCCCTGCCCTG yhcG 3813854 - 3814981 + | hypothetical protein TERM 5164 3814996 - 3815022 + T 93 -12.4 -3.53444 | opp_overlap 3814991, overlap 3814998 ATTTCAGCAATTTCG AATTCTGCAGAC AGT GTCTGCAGAATC TTTAAAACGAACTAA TERM 5165 3814998 - 3815020 + T 100 -15 -3.34517 | opp_overlap 3814991, overlap 3814996 TTCAGCAATTTCGAA TTCTGCAGAC AGT GTCTGCAGAA TCTTTAAAACGAACT yhcH 3815505 - 3815041 - | hypothetical protein nanK 3816377 - 3815502 - | putative N-acetylmannosamine kinase nanE 3817063 - 3816374 - | putative N-acetylmannosamine-6-P epimerase TERM 5166 3817103 - 3817084 - R 74 -10.7 -2.78679 | overlap 3817083 TTCCCTTAGCGAAAG GCCCGGT ACAGAG ACCGGGC AACAGGATTAACTTT nanT 3818601 - 3817111 - | sialic acid transporter TERM 5167 3818614 - 3818635 + r 100 -12.3 -3.8377 | gap 1 CATTGTGAGTCTCCC GCG-GTGGGC GAT GCCCACACGC TTTGGTATGAAAATT TERM 5168 3818712 - 3818663 - R 75 -10.9 -2.89683 | gap 1, opp_overlap 3818693 3818695 ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAC-AACTCA CCCGCGCTCTTGCAT nanA 3819603 - 3818710 - | N-acetylneuraminate lyase nanR 3820517 - 3819726 - | DNA-binding transcriptional dual regulator TERM 5169 3821574 - 3821563 - g 82 -3 -5.24129 | GCTTTCGACAAAAAA GATA AAAA TATC AATCACGAACAGGCA TERM 5170 3822169 - 3822179 + G 78 -8.2 -4.15565 | ACGTCAGGAATTGCA GGCG TTT CGCC TTTTGCGGTAGTGAA dcuD 3820897 - 3822264 + | putative transporter TERM 5171 3822304 - 3822278 - T 93 -11.7 -3.9993 | opp_overlap 3822278 3822283, overlap 3822283 AAGTCATTAAAAAGA CAAAACAGGCC GCCAG GGCCTGTTTTA GTATTACTTCACAAC TERM 5172 3822299 - 3822283 - T 93 -9.4 -5.00027 | opp_overlap 3822283 3822278, overlap 3822278 ATTAAAAAGACAAAA CAGGCC GCCAG GGCCTG TTTTAGTATTACTTC TERM 5173 3822283 - 3822299 + T 89 -9.4 -4.46404 | opp_overlap 3822278 3822283, overlap 3822278 ATTAAAAAGACAAAA CAGGCC GCCAG GGCCTG TTTTAGTATTACTTC sspB 3822805 - 3822308 - | ClpXP protease specificity-enhancing factor sspA 3823449 - 3822811 - | stringent starvation protein A TERM 5174 3823792 - 3823805 + r 93 -9.5 -5.03145 | opp_overlap 3823792 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG TERM 5175 3823805 - 3823792 - R 100 -9.5 -5.64274 | opp_overlap 3823792 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG rpsI 3824236 - 3823844 - | 30S ribosomal subunit protein S9 rplM 3824680 - 3824252 - | 50S ribosomal subunit protein L13 TERM 5176 3824542 - 3824557 + g 70 -6.8 -4.05446 | CACCGGTATCTACGT GCGGAG TGTA TTCCGC TTTGTGCTTACCGCG TERM 5177 3824858 - 3824876 + r 91 -8.8 -5.06735 | opp_overlap 3824856 GATTATAGAGAAGTC GGGGTCAA AGA TCGACCCC TTTTTGTGATTTGTG yhcM 3826026 - 3824899 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 5178 3826481 - 3826458 - g 88 -11 -4.13282 | opp_overlap 3826458 AGCACATGGCGAAAA GCTCCAGCAG CCTG CTGCCGGAAC TGTCTGCTGAAGCAA yhcB 3826220 - 3826618 + | putative cytochrome d ubiquinol oxidase subunit III TERM 5179 3826629 - 3826647 + F 82 -12.4 -2.83517 | ACTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTCTCCCT degQ 3826772 - 3828139 + | serine endoprotease, periplasmic TERM 5180 3828149 - 3828178 + F 76 -10.7 -3.11192 | opp_overlap 3828149 CGTTAATGTCGTAAA CCGGGCATCAGGC TGAC GTGTGATGTCCGG TTAACTCGTGGTATG TERM 5181 3828995 - 3828970 - g 74 -8.3 -3.96827 | gap 1, opp_overlap 3828983, overlap 3828963 AAAATTATGGATAAA CTGATC-CGCGA TGG TCGCGTGATCCG CGGCTACATTGGTAT degS 3828229 - 3829296 + | serine endoprotease, periplasmic TERM 5182 3829343 - 3829312 - T 100 -12.5 -4.07568 | opp_overlap 3829319, overlap 3829319 GTCGTGCGCTCAAAA CAAAAAACCGGAG TCTGCG CTCCGGTTTTTTA TTATCCGCTAATCAA TERM 5183 3829336 - 3829319 - T 100 -8.4 -5.79595 | opp_overlap 3829319, overlap 3829312 GCTCAAAACAAAAAA CCGGAG TCTGCG CTCCGG TTTTTTATTATCCGC TERM 5184 3829319 - 3829336 + T 100 -9.1 -5.55769 | opp_overlap 3829319 3829312 GCTCAAAACAAAAAA CCGGAGT CTGC GCTCCGG TTTTTTATTATCCGC mdh 3830297 - 3829359 - | malate dehydrogenase, NAD(P)-binding TERM 5185 3830578 - 3830597 + H 70 -7.2 -3.91897 | gap 1 TTTAAGCAGAATTTG CATGCCGTG ACG CA-GGCATG TTTCTCAATAACGAA argR 3830732 - 3831202 + | DNA-binding transcriptional dual regulator, L-arginine-binding TERM 5186 3831205 - 3831235 + F 74 -9.6 -3.30039 | overlap 3831204 CCAGGAGCTTTAATC TCTGCCCCGTCGCT TCT GGCGGCGGGGAAAA TGTTGCTTATCCCTC TERM 5187 3831353 - 3831343 - f 81 -3.2 -5.45726 | CATACGGTAAAAAAA GCAC ATT ATGC AAAATTCATTATCTA yhcN 3831567 - 3831830 + | hypothetical protein TERM 5188 3831858 - 3831874 + T 100 -15.1 -5.78622 | opp_overlap 3831856 TTGTCCGACGATATT GCCCCCG GTT CGGGGGC TTTTTTTTGCGCTAA yhcO 3832158 - 3831886 - | putative barnase inhibitor TERM 5189 3832242 - 3832224 - R 100 -11.7 -5.17353 | opp_overlap 3832224 ATAGCCATGAAAAAA CCGACGC TTTTG GCGTCGG TTTTGACTTAACTAT TERM 5190 3832224 - 3832242 + r 100 -12.4 -4.29176 | opp_overlap 3832224 ATAGCCATGAAAAAA CCGACGCT TTT GGCGTCGG TTTTGACTTAACTAT aaeB 3834217 - 3832250 - | p-hydroxybenzoic acid efflux system component aaeA 3835155 - 3834223 - | p-hydroxybenzoic acid efflux system component TERM 5191 3834928 - 3834942 + g 76 -4.2 -5.0133 | CGGCTGGTCGATGGT GAACAG TAC CTGTCC TTTTTTCACCAGCTG aaeX 3835366 - 3835163 - | membrane protein of efflux system aaeR 3835549 - 3836478 + | DNA-binding transcriptional regulator, efflux system tldD 3838051 - 3836606 - | putative peptidase TERM 5192 3837461 - 3837432 - G 74 -6.3 -4.50661 | gap 1, opp_overlap 3837448 AACTCATAACCAAAA CGACCGCCGCCGCC ACT GGC-ACCGCGTTCG CGTTTGCCATCTTCT TERM 5193 3837601 - 3837623 + g 72 -9.8 -3.28712 | TCACTTCTTGTACGC GCTTGTCCGC TTC GCGGGCAACC TTATCGACGCGACGC yhdP 3842007 - 3838207 - | conserved hypothetical protein; putative membrane protein, putative transporter TERM 5194 3838825 - 3838836 + g 74 -5.8 -4.54727 | opp_overlap 3838806 GGCGGCATCAATTTT CTGC CCAC GCAG TTTTCCTTTCAGCGA TERM 5195 3839164 - 3839176 + g 71 -9.1 -3.51411 | overlap 3839160 CGCGTTATTACGCAT CGCCA GCG TGGCG TTGATTTCACGCCCT rng 3843544 - 3842075 - | ribonuclease G TERM 5196 3842703 - 3842718 + g 82 -9 -4.20136 | AGTTCTACTTTGCGT TCCAGC GCTC GCTGGA TTTCGTTTTCGACAT yhdE 3844127 - 3843534 - | putative septum formation protein mreD 3844624 - 3844136 - | cell wall structural complex MreBCD transmembrane component MreD TERM 5197 3844358 - 3844345 - G 70 -6.7 -4.08216 | CGAGGTTGCGGAAAA GCTGA TATT TCAGC GCCACCAGGTAAGCA mreC 3845640 - 3844624 - | cell wall structural complex MreBCD transmembrane component MreC TERM 5198 3845317 - 3845346 + g 76 -7.7 -4.27117 | opp_overlap 3845319, overlap 3845325 ACGCAGCGGGGAACC CAGCAGCTCGCGC AGAC GCGCGTTCTCCTG TTTGTATTGTCCAAG TERM 5199 3845325 - 3845338 + g 73 -9.5 -3.59627 | opp_overlap 3845319, overlap 3845317 GGGAACCCAGCAGCT CGCGC AGAC GCGCG TTCTCCTGTTTGTAT TERM 5200 3845699 - 3845666 - R 71 -10.3 -2.78596 | opp_overlap 3845661, overlap 3845669 3845680 TATTCTCGTATCAGA CCAGGCAGGGTAAAC AGAC ATTTCCCCTGCCTGC ATCCGATTACTCTTC TERM 5201 3845696 - 3845669 - R 74 -10.6 -2.66316 | opp_overlap 3845661, overlap 3845666 3845680 TCTCGTATCAGACCA GGCAGGGTAAAC AGAC ATTTCCCCTGCC TGCATCCGATTACTC mreB 3846749 - 3845706 - | cell wall structural complex MreBCD, actin-like component MreB TERM 5202 3846518 - 3846501 - G 72 -8.3 -3.73647 | opp_overlap 3846501 3846503 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 5203 3846501 - 3846518 + g 74 -8.3 -3.90291 | opp_overlap 3846501, overlap 3846503 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 5204 3846503 - 3846516 + g 71 -9.5 -3.54146 | opp_overlap 3846501, overlap 3846501 CAGTCACGAAGAAGT CGGCG ATAA CGCCG TCTTTCATTGGGCGA ECUMN_3725 3846857 - 3847045 + | hypothetical protein csrD 3848994 - 3847054 - | inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways TERM 5205 3847772 - 3847755 - G 72 -8.3 -3.85698 | CCGGTTTTTGATAAA GGCGCGG GCCG CCGCGAC TCAGCATTTGCTCGA TERM 5206 3849855 - 3849907 + G 70 -5.7 -4.33819 | gap 3, overlap 3849848 ATTACGGCGGCTGCG TGGCG-GCCTGTGGTCTGGC-GGGTG GTTT TACTCTGCCA-ACCACGGTCATGCCA TTTATTCTGCGTAAT yhdH 3849146 - 3850120 + | putative oxidoreductase, Zn-dependent and NAD(P)-binding ECUMN_3728 3850157 - 3850987 + | hypothetical protein TERM 5207 3850994 - 3851023 + F 75 -10.7 -2.95476 | opp_overlap 3850993, overlap 3851003 TTGCATTAACGCAAC CTCCGTCATGCTT GAAA AAGCTTGTCGGAG TATGTGATGAATGCT TERM 5208 3851053 - 3851075 + F 100 -10.6 -5.55769 | opp_overlap 3851053 TGCAAACTCACCGAA GCCGATTTTG CTA CTAAATCGGC TTTTTTATTGTCACG TERM 5209 3851075 - 3851053 - f 76 -10.6 -3.11732 | opp_overlap 3851053 TGCAAACTCACCGAA GCCGATTTTG CTA CTAAATCGGC TTTTTTATTGTCACG accB 3851853 - 3852323 + | acetyl CoA carboxylase, BCCP subunit TERM 5210 3852828 - 3852811 - g 72 -8.3 -3.78775 | CCGGTGATTATCAAA GCCTCCG GCGG CGGCGGC GGTCGCGGTATGCGC TERM 5211 3853285 - 3853267 - g 74 -8 -4.00756 | GACCTGATCAAAGAA CAGCTGCG TAT CGCTGCCG GTCAACCGCTGTCGA accC 3852334 - 3853683 + | acetyl-CoA carboxylase, biotin carboxylase subunit TERM 5212 3853719 - 3853703 - f 100 -13.7 -4.19276 | opp_overlap 3853703 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG TERM 5213 3853703 - 3853719 + F 100 -13.7 -5.5112 | opp_overlap 3853703 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG yhdT 3853792 - 3854034 + | conserved hypothetical protein; putative inner membrane protein TERM 5214 3854068 - 3854116 + G 76 -11.2 -3.41134 | gap 2, opp_overlap 3854103 CGCCTATCTGGTGGT GGTGTTCGGTATCTCTGTTTATGC GAT GCGTAAACGGAGC-ACCG-GCACC TTCCTTAATGAGTAT TERM 5215 3854541 - 3854553 + G 70 -10.5 -2.71791 | overlap 3854540 GCATTGCGCTCTACA CCGCC TTC GGCGG CTTTCGCGCCAGCGT panF 3854024 - 3855475 + | pantothenate:sodium symporter TERM 5216 3855550 - 3855578 + G 77 -8.9 -4.11216 | opp_overlap 3855559, overlap 3855551 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 5217 3855551 - 3855577 + G 79 -12.4 -3.06515 | opp_overlap 3855559, overlap 3855550 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3855487 - 3856368 + | methylase for 50S ribosomal subunit protein L11 TERM 5218 3856462 - 3856422 - f 70 -5.5 -4.40358 | AGCGATGTCACAAAA GGCACGTTAATTTGC CGATTATTTAC GCAAATTTGCGTGCC AAAATTTTCATTCAT TERM 5219 3856502 - 3856487 - f 81 -3.3 -5.38958 | opp_overlap 3856487 3856496, overlap 3856498 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTTGAGTGTA TERM 5220 3856662 - 3856648 - f 74 -4.2 -5.00884 | overlap 3856649 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG dusB 3856697 - 3857662 + | tRNA-dihydrouridine synthase B fis 3857688 - 3857984 + | global DNA-binding transcriptional dual regulator TERM 5221 3858039 - 3858014 - f 78 -6 -4.7254 | opp_overlap 3858014 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 5222 3858014 - 3858039 + F 91 -8.2 -5.29782 | opp_overlap 3858014 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 5223 3858905 - 3858891 - g 88 -5.6 -5.21683 | AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCAGGTT yhdJ 3858070 - 3858954 + | methyltransferase yhdU 3859038 - 3859217 + | hypothetical protein envR 3859882 - 3859220 - | DNA-binding transcriptional regulator acrE 3860281 - 3861438 + | cytoplasmic membrane lipoprotein acrF 3861450 - 3864554 + | multidrug efflux system protein TERM 5224 3864590 - 3864563 - f 74 -7.1 -4.18303 | opp_overlap 3864565 3864569, overlap 3864565 3864569 AGGATAAATCAGAAA CATAAAGGCAC TTTCGG GTGCCTTTATT ATTTTCAGTGAAACC TERM 5225 3864565 - 3864588 + F 85 -10.4 -4.21812 | opp_overlap 3864565 3864563 3864569, overlap 3864569 GATAAATCAGAAACA TAAAGGCACT TTCG GGTGCCTTTA TTATTTTCAGTGAAA TERM 5226 3864588 - 3864565 - f 77 -9.7 -3.67823 | opp_overlap 3864565 3864569, overlap 3864563 3864569 GATAAATCAGAAACA TAAAGGCAC TTTCGG GTGCCTTTA TTATTTTCAGTGAAA TERM 5227 3864584 - 3864569 - f 73 -6.1 -4.42513 | opp_overlap 3864565 3864569, overlap 3864565 3864563 AATCAGAAACATAAA GGCAC TTTCGG GTGCC TTTATTATTTTCAGT TERM 5228 3864569 - 3864584 + F 79 -6.8 -4.68601 | opp_overlap 3864569 3864565 3864563, overlap 3864565 AATCAGAAACATAAA GGCACT TTCG GGTGCC TTTATTATTTTCAGT yhdV 3864807 - 3865028 + | conserved hypothetical protein; putative outer membrane protein TERM 5229 3865034 - 3865057 + F 78 -10.2 -3.57462 | opp_overlap 3865030 3865029 GTCGAAATAACTGCA CAGGGCGCGG AGTA CCGCACTCTG TTTAACGATACAGTA TERM 5230 3865255 - 3865273 + G 77 -10.3 -3.695 | opp_overlap 3865243 3865252 3865250, overlap 3865253 AACGCGTAAATATTT TGCGCCA AAATG TGGCGCA TGTTTCATTTTCGCA ECUMN_3742 3865254 - 3865430 + | hypothetical protein TERM 5231 3865424 - 3865408 - f 84 -9.5 -4.27259 | opp_overlap 3865410, overlap 3865421 CACAGACAGGTAAAA GACGTTT CCC AAACGTC CTATAACGATAATTT aapJ 3865567 - 3866484 + | amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5232 3866501 - 3866522 + F 87 -13.7 -3.07233 | opp_overlap 3866500 3866503, overlap 3866503 3866518 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC TERM 5233 3866503 - 3866520 + F 73 -10.5 -3.09135 | opp_overlap 3866503 3866500, overlap 3866501 3866518 GGTGTGAGGTAACGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT TERM 5234 3867070 - 3867094 + G 75 -7.1 -4.30933 | TCGTGGGCTTTATAT TCCGTCACC GCAGCTG GGAGACGGA TTTATTGCGTTTATC TERM 5235 3867208 - 3867178 - g 77 -8.2 -4.13077 | AACATACCAGATAAA GACCGGACAACTGC GCC GCACCTGGCCGATC GCCGCTGTGTTGATC aapQ 3866552 - 3867733 + | amino-acid transporter subunit ; membrane component of ABC superfamily aapM 3867743 - 3868846 + | amino-acid transporter subunit ; membrane component of ABC superfamily aapP 3868854 - 3869612 + | amino-acid transporter subunit ; ATP-binding component of ABC superfamily TERM 5236 3869639 - 3869658 + F 100 -13.6 -3.83214 | opp_overlap 3869639, overlap 3869628 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 5237 3869658 - 3869639 - f 100 -13.6 -5.0925 | opp_overlap 3869639 3869628 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 5238 3871238 - 3871249 + F 71 -4.4 -4.7254 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTAATAAACAGT TERM 5239 3872540 - 3872552 + F 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 5240 3873094 - 3873118 + F 72 -8 -3.93061 | gap 1, opp_overlap 3873100 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 5241 3873157 - 3873194 + F 100 -6.3 -5.68438 | opp_overlap 3873153 3873159, overlap 3873159 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 5242 3873159 - 3873192 + F 88 -8.9 -4.47052 | opp_overlap 3873153 3873159, overlap 3873157 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 5243 3873192 - 3873159 - f 77 -6.7 -4.49756 | opp_overlap 3873159 3873157, overlap 3873153 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 5244 3875203 - 3875215 + G 74 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 5245 3875235 - 3875249 + G 100 -4.2 -5.61913 | opp_overlap 3875235, overlap 3875224 3875236 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTTCTCTTTGTT TERM 5246 3875236 - 3875248 + G 72 -7.7 -3.93487 | opp_overlap 3875235, overlap 3875224 3875235 TCTTTCAGAGTCAAC CCTGA ATT TCAGG ATTTTTTCTCTTTGT yrdA 3875168 - 3876049 + | hypothetical protein yrdB 3876282 - 3876025 - | hypothetical protein aroE 3877097 - 3876279 - | dehydroshikimate reductase, NAD(P)-binding yrdC 3877674 - 3877102 - | putative ribosome maturation factor yrdD 3878221 - 3877679 - | putative DNA topoisomerase TERM 5247 3877734 - 3877724 - G 70 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 5248 3878093 - 3878061 - G 73 -11.3 -2.8001 | overlap 3878088 AGAACTTTGACGATA TGTCCATCCGCTGAA GAT TTCAGAGGACGGACG TAGTCACACGCCGGA smg 3878723 - 3878250 - | hypothetical protein smf 3879819 - 3878695 - | hypothetical protein def 3879949 - 3880458 + | peptide deformylase TERM 5249 3880519 - 3880541 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 5250 3880621 - 3880611 - g 74 -3.2 -5.02074 | GGACGCGGTAAAAAA CTGA TGC CCAG CCCGGTTAAAGTTCT TERM 5251 3880704 - 3880694 - g 85 -6.8 -4.77165 | overlap 3880695 GCGTCCACAAGAAAA CCAG CAA CTGG TCGCCGATCTACAGG fmt 3880473 - 3881420 + | 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase TERM 5252 3881436 - 3881454 + F 87 -8 -5.01535 | overlap 3881437 TAGTCCACTCTTCTA AGCCCGGT CTT GCCGGGCA TTTTTATACTTATGA TERM 5253 3881437 - 3881453 + F 87 -11.5 -3.59837 | overlap 3881436 AGTCCACTCTTCTAA GCCCGGT CTT GCCGGGC ATTTTTATACTTATG TERM 5254 3881491 - 3881475 - g 88 -5.1 -5.17353 | overlap 3881478 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCCCAGGC TERM 5255 3881488 - 3881478 - g 75 -5.4 -4.67552 | overlap 3881475 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCCCA TERM 5256 3881614 - 3881628 + G 77 -10 -3.60971 | opp_overlap 3881583 AAGAGTTGTGCTTTG GCGTAC TGC GTACGC TTTCGCAGTTAGACT TERM 5257 3882356 - 3882339 - g 75 -7 -4.33151 | TACGACAATTTAAAA CGCCTT GGTATG AAGGCG ACCGTGAAACAAGGT rsmB 3881466 - 3882755 + | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent trkA 3882777 - 3884153 + | NAD-binding component of TrK potassium transporter TERM 5258 3884155 - 3884182 + F 100 -15.8 -3.89938 | opp_overlap 3884158 3884161, overlap 3884158 3884161 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT TERM 5259 3884179 - 3884158 - f 95 -13.1 -3.33696 | opp_overlap 3884155 3884158 3884161, overlap 3884161 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 5260 3884158 - 3884179 + F 100 -13.1 -4.05629 | opp_overlap 3884158 3884161, overlap 3884155 3884161 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 5261 3884176 - 3884161 - f 80 -10.4 -3.81146 | opp_overlap 3884158 3884155 3884161, overlap 3884158 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 5262 3884161 - 3884176 + F 82 -10.4 -4.13254 | opp_overlap 3884161 3884158, overlap 3884158 3884155 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT mscL 3884283 - 3884693 + | mechanosensitive channel TERM 5263 3884756 - 3884710 - T 100 -19.7 -2.90992 | overlap 3884713 AAGCGCCTGAAAGCA GAAGGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCCCGATTG TERM 5264 3884753 - 3884713 - T 100 -17.8 -3.60151 | overlap 3884710 CGCCTGAAAGCAGAA GGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCCCGA yhdL 3884908 - 3884690 - | hypothetical protein zntR 3885389 - 3884964 - | DNA-binding transcriptional activator in response to Zn(II) TERM 5265 3885052 - 3885026 - G 70 -5.9 -4.26871 | gap 1, overlap 3885018 3885028 GAATCGAGCAATAAA CACTGCTATGGG CGGT CCCACAACAG-G CATCGTTAAGGCGTT TERM 5266 3885051 - 3885028 - G 76 -9.6 -3.72775 | overlap 3885018 3885026 ATCGAGCAATAAACA CTGCTATGGG CGGT CCCACAACAG GCATCGTTAAGGCGT yhdN 3885768 - 3885400 - | hypothetical protein TERM 5267 3885831 - 3885864 + r 85 -11.9 -3.37879 | opp_overlap 3885828 3885841, overlap 3885832 3885841 TGGGGATACTAAGGG TATAAAAAAACCCGC CGGG GCGGGTTTTTTTACG TTGCTTCAGATTACT TERM 5268 3885832 - 3885863 + r 84 -13.2 -2.62246 | opp_overlap 3885828 3885841, overlap 3885831 3885841 GGGGATACTAAGGGT ATAAAAAAACCCGC CGGG GCGGGTTTTTTTAC GTTGCTTCAGATTAC TERM 5269 3885854 - 3885841 - R 100 -9.5 -5.63504 | opp_overlap 3885832 3885831 3885841, overlap 3885828 AAGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 5270 3885841 - 3885854 + r 100 -9.5 -5.54192 | opp_overlap 3885828 3885841, overlap 3885832 3885831 AAGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 5271 3885864 - 3885889 + r 72 -8.3 -3.67102 | overlap 3885885 GGCGGGTTTTTTTAC GTTGCTTCAGA TTAC TCTGCAGCAGC TTCTGCTTTCTCTGA TERM 5272 3885885 - 3885895 + r 70 -6.8 -4.0371 | overlap 3885864 TCAGATTACTCTGCA GCAG CTT CTGC TTTCTCTGAACGATC rplQ 3886258 - 3885875 - | 50S ribosomal subunit protein L17 rpoA 3887288 - 3886299 - | RNA polymerase, alpha subunit TERM 5273 3886382 - 3886394 + g 74 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCAAGGTT TERM 5274 3887329 - 3887311 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3887934 - 3887314 - | 30S ribosomal subunit protein S4 TERM 5275 3887424 - 3887434 + g 70 -6.8 -4.12188 | overlap 3887421 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 5276 3887961 - 3887979 + r 75 -4.4 -5.00616 | opp_overlap 3887961 3887965 AACAAACCTGGAAAA CGAAGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3888357 - 3887968 - | 30S ribosomal subunit protein S11 TERM 5277 3888391 - 3888416 + r 71 -8.9 -3.39449 | overlap 3888392 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 5278 3888392 - 3888415 + r 70 -10.2 -2.63348 | overlap 3888391 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG rpsM 3888730 - 3888374 - | 30S ribosomal subunit protein S13 TERM 5279 3888555 - 3888573 + g 77 -8.8 -4.05446 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTCCTTCAGACA TERM 5280 3888847 - 3888818 - R 100 -12.3 -4.6645 | gap 1 CACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA secY 3890356 - 3889025 - | preprotein translocase membrane subunit TERM 5281 3889558 - 3889512 - G 73 -9.4 -3.56921 | opp_overlap 3889518 3889526, overlap 3889510 GGGAACAGAATAATA CTGGAAGCGAAGATTGCCGGGA TTA CCCCCGCCATATTCACTTTCAG CGGTAAATGTGTGCT TERM 5282 3889923 - 3889892 - G 74 -10.2 -3.51032 | opp_overlap 3889898, overlap 3889898 AGCGGTGAAGTAGAA TGCAAAGCCCGG GTTAATGA CCAGGCCTTGCA TACCAGGCATATTCG rplO 3890798 - 3890364 - | 50S ribosomal subunit protein L15 TERM 5283 3890744 - 3890757 + g 75 -5.2 -4.59853 | opp_overlap 3890737, overlap 3890737 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3890981 - 3890802 - | 50S ribosomal subunit protein L30 rpsE 3891488 - 3890985 - | 30S ribosomal subunit protein S5 rplR 3891856 - 3891503 - | 50S ribosomal subunit protein L18 rplF 3892399 - 3891866 - | 50S ribosomal subunit protein L6 rpsH 3892804 - 3892412 - | 30S ribosomal subunit protein S8 rpsN 3893143 - 3892838 - | 30S ribosomal subunit protein S14 rplE 3893697 - 3893158 - | 50S ribosomal subunit protein L5 TERM 5284 3893535 - 3893553 + g 93 -6 -5.24531 | TTGCTGCCAGGTCTG CTGCTG CGTTATC CAGCAG TTTTTTGTCAGCGAT TERM 5285 3893641 - 3893652 + g 81 -4.4 -5.12617 | opp_overlap 3893641, overlap 3893620 AGAATTGTAGTTAAA CTCA GTCA TGAG TTTTTTAACTACTTC rplX 3894026 - 3893712 - | 50S ribosomal subunit protein L24 rplN 3894408 - 3894037 - | 50S ribosomal subunit protein L14 TERM 5286 3894548 - 3894523 - R 100 -14.9 -5.252 | opp_overlap 3894523 3894527 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 5287 3894523 - 3894548 + r 95 -14.9 -3.25823 | opp_overlap 3894523, overlap 3894527 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 5288 3894527 - 3894544 + r 93 -11.3 -4.29106 | opp_overlap 3894523, overlap 3894523 GGTAGAAAAAATAAA CGGCTCA TTTC TGAGCCG TTTATTCGTATCGAG rpsQ 3894827 - 3894573 - | 30S ribosomal subunit protein S17 TERM 5289 3894795 - 3894748 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 3894767 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA rpmC 3895018 - 3894827 - | 50S ribosomal subunit protein L29 rplP 3895428 - 3895018 - | 50S ribosomal subunit protein L16 rpsC 3896142 - 3895441 - | 30S ribosomal subunit protein S3 rplV 3896492 - 3896160 - | 50S ribosomal subunit protein L22 rpsS 3896785 - 3896507 - | 30S ribosomal subunit protein S19 rplB 3897623 - 3896802 - | 50S ribosomal subunit protein L2 TERM 5290 3897659 - 3897679 + r 77 -9.7 -3.57462 | opp_overlap 3897662, overlap 3897662 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3897943 - 3897641 - | 50S ribosomal subunit protein L23 TERM 5291 3897910 - 3897898 - G 78 -9.1 -3.85817 | ACGCTTTTTCAGAAA CGTGC GGT GCACG CAGCACCTTCAGCAG rplD 3898545 - 3897940 - | 50S ribosomal subunit protein L4 TERM 5292 3898513 - 3898525 + g 78 -10.5 -3.42663 | opp_overlap 3898508, overlap 3898512 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3899185 - 3898556 - | 50S ribosomal subunit protein L3 rpsJ 3899529 - 3899218 - | 30S ribosomal subunit protein S10 ECUMN_3795 3899819 - 3899658 - | hypothetical protein TERM 5293 3900335 - 3900300 - g 82 -3 -5.17353 | opp_overlap 3900300 AGAGTCATTAAAAAA CCCGCTGCCGTTTG GTCCATTT CTGGCGGCTGCGGG TTTCGTTGTAGGCTG TERM 5294 3900300 - 3900335 + G 72 -8.1 -4.00124 | opp_overlap 3900300 AGAGTCATTAAAAAA CCCGCTGCCGTTTGG TCCATT TCTGGCGGCTGCGGG TTTCGTTGTAGGCTG ECUMN_3796 3899908 - 3900375 + | putative bifunctional prepilin peptidase HopD: leader peptidase; methyl transferase (General Secretory Pathway) TERM 5295 3900371 - 3900383 + T 79 -4.9 -5.04733 | GTTTGCTGGCAGGCC GTTAA TCT TTAAC TTTTATTTGTGATTG bfr 3900848 - 3900372 - | bacterioferritin, iron storage and detoxification protein TERM 5296 3900689 - 3900665 - G 79 -2.2 -5.26119 | gap 1, opp_overlap 3900665 3900667, overlap 3900660 3900667 CTTCTAAAAACAAAA TACGCTCGATA TATT TATC-AGCGTG TTTCATCTCATCGAT bfd 3901115 - 3900921 - | bacterioferritin-associated ferredoxin TERM 5297 3901268 - 3901253 - R 100 -11.8 -4.72986 | opp_overlap 3901253 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTTAATTCGAAAC TERM 5298 3901253 - 3901268 + r 100 -11.8 -4.8622 | opp_overlap 3901253 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTTAATTCGAAAC tufA 3902482 - 3901298 - | protein chain elongation factor EF-Tu (duplicate of tufB) TERM 5299 3902261 - 3902311 + g 74 -2.5 -5.06414 | overlap 3902231 3902263 GTGTGCGTAGTGACG GGTCGGGGTGTCATATTCAACGT GAGAA GTGTTGATGGTGATACCACGAGC TTTTTCTTCCGGCGC TERM 5300 3902527 - 3902502 - R 93 -15.5 -2.78935 | opp_overlap 3902498 3902497 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA fusA 3904667 - 3902553 - | protein chain elongation factor EF-G, GTP-binding TERM 5301 3904739 - 3904714 - R 87 -11.2 -3.63895 | gap 1, opp_overlap 3904704, overlap 3904704 TTTAAGTAGCCCAAA GCGGGCTGCTT ACTGG AAGC-GCCCGC CTGGTGACTAAAACT rpsG 3905234 - 3904764 - | 30S ribosomal subunit protein S7 rpsL 3905705 - 3905331 - | 30S ribosomal subunit protein S12 TERM 5302 3905775 - 3905753 - R 100 -12.8 -4.7268 | AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG tusB 3906118 - 3905831 - | methylsulfur transfer protein tusC 3906485 - 3906126 - | methylsulfur transfer protein tusD 3906871 - 3906485 - | methylsulfur transfer protein yheO 3907593 - 3906871 - | putative DNA-binding transcriptional regulator TERM 5303 3907388 - 3907419 + g 76 -7.4 -4.21194 | gap 1 ATCTTCCGGCCTGTA TGTTCA-CCGTTAGC AAT GCGAATGGCTGAACA TTTTAGATCCTGCAA TERM 5304 3907618 - 3907605 - R 79 -6.7 -4.59226 | opp_overlap 3907615 3907616 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTAACTTT TERM 5305 3907689 - 3907677 - R 70 -9.1 -3.24804 | opp_overlap 3907677, overlap 3907675 3907673 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 5306 3907677 - 3907689 + r 73 -9.1 -3.54919 | opp_overlap 3907677 3907675 3907673 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 5307 3907716 - 3907759 + r 71 -4.7 -4.61482 | gap 2, opp_overlap 3907728, overlap 3907717 3907728 AATTATATCCGGCCT GTAATAAAAAAACCGCCGCCT GGTC AGGCGGCGG--TTCTTAATGC TTATTTTTTAGCAGA TERM 5308 3907717 - 3907762 + r 74 -4.2 -5.0133 | gap 2, opp_overlap 3907728, overlap 3907716 3907728 ATTATATCCGGCCTG TAA-TA-AAAAAACCGCCGCCT GGTC AGGCGGCGGTTCTTAATGCTTA TTTTTTAGCAGAATC TERM 5309 3907749 - 3907728 - R 100 -17.3 -5.7946 | opp_overlap 3907716 3907717 3907728 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT TERM 5310 3907728 - 3907749 + r 100 -17.3 -3.79396 | opp_overlap 3907728, overlap 3907716 3907717 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT fkpA 3908572 - 3907760 - | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) slyX 3908793 - 3909011 + | hypothetical protein TERM 5311 3909017 - 3909045 + T 89 -14.7 -2.85763 | opp_overlap 3909024, overlap 3909024 ACATTATTGAGGCGT AAAAAAAGCGGGG ATT CCCCGCTTTTTTG TCACTTTTTCGGTAT TERM 5312 3909038 - 3909024 - T 100 -12.8 -5.42259 | opp_overlap 3909017 3909024 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACTTTT TERM 5313 3909024 - 3909038 + T 100 -12.8 -5.35222 | opp_overlap 3909024, overlap 3909017 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACTTTT slyD 3909650 - 3909060 - | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) TERM 5314 3909624 - 3909635 + g 72 -5.8 -4.39989 | overlap 3909608 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3909945 - 3909745 - | hypothetical protein kefB 3911760 - 3909955 - | potassium:proton antiporter TERM 5315 3911276 - 3911257 - G 77 -10 -3.62046 | CGACCCCGCCAACAA CGGCACTA ACGC CAGTGCCG GGATCACCGCCAGAT kefG 3912314 - 3911760 - | component of potassium effux complex with KefB TERM 5316 3913766 - 3913750 - g 70 -5 -4.56597 | opp_overlap 3913750, overlap 3913724 TCCGGTGGGGAAAAA GCCCGC CTGGT GCTGGC ATTAATTGTCTGGCA yheS 3912442 - 3914355 + | fused putative transporter subunits of ABC superfamily: ATP-binding components TERM 5317 3914508 - 3914521 + G 70 -4.5 -4.45083 | TGGCAGCGACTGGAG TTGCC CGAC GGCGA TTTTGTCGATCTCGC yheT 3914355 - 3915377 + | putative hydrolase TERM 5318 3915509 - 3915485 - g 78 -8.5 -4.20769 | ACACTTGAACAGAAA GTCGCCGACGT CAA ACGCCAGCTAC AGTGCGGAGAAGCGG yheU 3915371 - 3915589 + | hypothetical protein prkB 3915643 - 3916512 + | phosphoribulokinase yhfA 3916971 - 3916567 - | hypothetical protein TERM 5319 3916917 - 3916905 - G 76 -7.7 -4.25104 | TGCCGTCCATTAAAA TCTGG TGA CCAGA GGCGGATTCGCCCAG ECUMN_3819 3917051 - 3917266 + | hypothetical protein TERM 5320 3917383 - 3917358 - g 70 -10.5 -2.76171 | overlap 3917355 ACCCATCCAAGAGCA CGCTTATTCAC CAGG GTGAAAAAGCG GAAACGCTGTACTAC crp 3917273 - 3917905 + | DNA-binding transcriptional dual regulator TERM 5321 3917917 - 3917941 + F 100 -16.5 -4.86731 | overlap 3917907 TTAATCCCGTCGGAG TGGCGCGTTAC CTG GTAGCGCGCCA TTTTGTTTCCCCCGA TERM 5322 3918552 - 3918529 - g 70 -3.6 -4.60041 | overlap 3918530 3918531 ACCGACCCTGAAAAA GCGCTGCCGC CGCT GCTGGTGCGC CAGCAAAAAGCGGTC yhfK 3917944 - 3920046 + | conserved hypothetical protein; putative inner membrane protein argD 3921333 - 3920113 - | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase pabA 3921982 - 3921419 - | aminodeoxychorismate synthase, subunit II fic 3922616 - 3922014 - | stationary-phase protein, cell division TERM 5323 3922311 - 3922325 + g 75 -5.6 -4.70659 | overlap 3922313 CTCCAGATCCTGCAT CAGGGC ATT GCCCTC TTTTTCGATATAAGC TERM 5324 3922313 - 3922323 + g 74 -8.2 -3.96999 | overlap 3922311 CCAGATCCTGCATCA GGGC ATT GCCC TCTTTTTCGATATAA yhfG 3922773 - 3922606 - | hypothetical protein TERM 5325 3922868 - 3922847 - R 100 -17.3 -3.46602 | GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG ppiA 3923450 - 3922878 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 5326 3923676 - 3923695 + H 87 -6.4 -5.26119 | overlap 3923677 AAAATCGCCCGCTCG CGGCATAG CCCG CTATGCCA TTTTATTTTTGAACG TERM 5327 3923677 - 3923694 + H 79 -9.9 -3.74587 | overlap 3923676 AAATCGCCCGCTCGC GGCATAG CCCG CTATGCC ATTTTATTTTTGAAC TERM 5328 3923767 - 3923790 + G 72 -8.8 -3.78934 | GGATTAGCTTTCTCT CCTACGCACT GACC GGTGCGTTGG TTATTGTCACCGGGA TERM 5329 3924105 - 3924122 + G 72 -7.7 -3.91716 | gap 1, overlap 3924109 ATGTATGAAGGGCGT CAGCGCGG TTC CCGC-CTG TTATTTACCGACTCC TERM 5330 3924314 - 3924304 - g 85 -6.8 -4.76644 | AACATGCACCAAAAA CGGA TGC TCCG GTAGAGAAAGAAAAG tsgA 3923721 - 3924902 + | putative transporter TERM 5331 3924910 - 3924937 + F 87 -10.5 -4.39166 | overlap 3924909 3924911 CTCATTAATTGCTCA TGCCGGACGGC ACTATC GTCGTCCGGCC TTTTCCTCTCTAACC TERM 5332 3924911 - 3924936 + F 93 -14 -3.23018 | overlap 3924909 3924910 TCATTAATTGCTCAT GCCGGACGGC ACTATC GTCGTCCGGC CTTTTCCTCTCTAAC TERM 5333 3926976 - 3926953 - g 70 -5.2 -4.3467 | gap 1, opp_overlap 3926961 3926964, overlap 3926939 3926954 ATCTCTACACCAAAA TCACC-GGCTC CCA GCGCCTGGCGA TGTTTGGCGCACAGA nirB 3925164 - 3927707 + | nitrite reductase, large subunit, NAD(P) H-binding TERM 5334 3927915 - 3927930 + G 70 -6.1 -4.27316 | opp_overlap 3927926 TGTGGGTCGCCAGCC CGCTG AAAAAA CAGCG TTTTCGCTTAAGCGA TERM 5335 3927939 - 3927926 - g 71 -2.3 -5.00884 | opp_overlap 3927915 3927930 AGCCCGCTGAAAAAA CAGCG TTTT CGCTT AAGCGACGGCTTGTG nirD 3927704 - 3928030 + | nitrite reductase, NAD(P)H-binding, small subunit TERM 5336 3928069 - 3928102 + F 73 -2.5 -5.16472 | gap 1, overlap 3928070 CTCCCCTTTTTGCAT GGTCCTGTAATA-ACC TTC GATATATTGCAGGACA TTTTTTAAACTTTTT TERM 5337 3928609 - 3928592 - g 82 -7.7 -4.56597 | opp_overlap 3928592 TCGCGCTGGCAAAAA CCACTGC ACCG GCAATGG TACTGTTCTTCAAAG nirC 3928156 - 3928962 + | nitrite transporter TERM 5338 3929761 - 3929776 + G 82 -9 -4.25104 | ATGAATCTGGTACGC CGCGAT GCGG ATCGCG TTTTCGTCGGCAAAC TERM 5339 3930246 - 3930210 - g 81 -9.3 -4.11484 | opp_overlap 3930222, overlap 3930215 GGCAATTGTCGAAAA CGGAACGGCAGTCACGC AGC GCGTGATTGACGGTACG CTCACGCAGCTGGGC TERM 5340 3930241 - 3930215 - g 76 -10.8 -3.36823 | opp_overlap 3930222, overlap 3930210 TTGTCGAAAACGGAA CGGCAGTCACGC AGC GCGTGATTGACG GTACGCTCACGCAGC cysG 3928981 - 3930354 + | fused siroheme synthase 1, 3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase ; uroporphyrinogen methyltransferase TERM 5341 3930364 - 3930381 + F 100 -11.3 -4.98531 | opp_overlap 3930363 CATTAATTTAACCAG GGCCAGA GAAG TCTGGCC TTTTTCGTTTACAAC yhfL 3930606 - 3930773 + | conserved hypothetical protein; putative secreted peptide TERM 5342 3930813 - 3930840 + T 100 -17 -4.59089 | overlap 3930815 CCGGTTTAATTGCCT GACGCCCTCGGG GTTA CCCGAGGGCGTA TTTATTTCTGCATTC TERM 5343 3930815 - 3930838 + T 100 -19.6 -3.89305 | overlap 3930813 GGTTTAATTGCCTGA CGCCCTCGGG GTTA CCCGAGGGCG TATTTATTTCTGCAT yhfS 3931965 - 3930880 - | hypothetical protein yhfT 3933281 - 3931977 - | conserved hypothetical protein; putative inner membrane protein yhfU 3933646 - 3933293 - | hypothetical protein php 3934535 - 3933657 - | putative hydrolase yhfW 3935758 - 3934532 - | putative mutase TERM 5344 3934655 - 3934636 - G 74 -7.8 -4.0162 | CCCCCACATCAGAAA GCGTGGTG CGCA CACCAAGC TGCGTAGCGACCATC yhfX 3936921 - 3935758 - | putative amino acid racemase TERM 5345 3936886 - 3936900 + g 76 -9.2 -3.72984 | opp_overlap 3936885, overlap 3936898 TGCGGCGGAAATTAG CGCCGG GTT CTGGCG TTTCAATGCTTCTAC TERM 5346 3936945 - 3936959 + r 83 -2.9 -5.54264 | opp_overlap 3936954, overlap 3936949 3936954 CTCGTTTCTGTTCCT TGAAT TAAAT ATTCA TTTTTTTGAATATTT yhfY 3937367 - 3937005 - | hypothetical protein yhfZ 3938289 - 3937384 - | hypothetical protein TERM 5347 3938243 - 3938262 + g 70 -4.2 -4.67552 | overlap 3938244 AACAAATAACGGGCC AGTGTCGT GATG ACGACGCC TTCTTTTTTGATAAA TERM 5348 3938428 - 3938415 - R 100 -9.5 -5.67967 | opp_overlap 3938415 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG TERM 5349 3938415 - 3938428 + r 91 -9.5 -4.67904 | opp_overlap 3938415 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG trpS 3939453 - 3938449 - | tryptophanyl-tRNA synthetase gph 3940204 - 3939446 - | phosphoglycolate phosphatase rpe 3940874 - 3940197 - | D-ribulose-5-phosphate 3-epimerase TERM 5350 3940879 - 3940891 + r 78 -6.3 -4.61482 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTTTCGCGGG dam 3941728 - 3940892 - | DNA adenine methylase TERM 5351 3941288 - 3941308 + g 79 -2.5 -5.24129 | AGCGAAGTGATACAA CTCTGCTTC CGG GAAATAGGG TTTTTTGTAGCGGCC TERM 5352 3941419 - 3941399 - G 82 -3.1 -5.19879 | overlap 3941401 3941404 GTTCAAATATAAAAA CAGTACCGC CCG ACGGAACGG ATCCTGGCTTTTGTT TERM 5353 3941612 - 3941591 - G 100 -13.1 -4.60073 | overlap 3941606 GATATAACGAGAAAA GTCGGTGTT GAGA AACACCGAC CCGGCACCTACAAAA TERM 5354 3941824 - 3941797 - R 89 -14.2 -3.05596 | opp_overlap 3941792 3941792 CAGCGCTTCAGGCAA CTCCCGCAACGA TAAA CCATTGCGGGAG ATAACCTTGATTACT damX 3943121 - 3941835 - | hypothetical protein TERM 5355 3943197 - 3943179 - R 78 -11 -3.15621 | opp_overlap 3943176, overlap 3943177 AACCTGAAGCTAATA GACCGCTT GAT AAGCGGCC TGACCTTTCTTGTTG aroB 3944301 - 3943213 - | 3-dehydroquinate synthase aroK 3944879 - 3944358 - | shikimate kinase I TERM 5356 3944667 - 3944685 + g 72 -4.5 -4.64676 | AATACCCTGTTTCTC GGTCAAC TCATT GATGACC TTTTCTTCGCGATCG TERM 5357 3944943 - 3944917 - R 82 -10 -4.05446 | TTCGTTAATGATAAA CCCGCTTCGCTC AGA GAGCGCCGCAGG ACATGAACTGAAACC TERM 5358 3945138 - 3945122 - R 83 -6.5 -5.06451 | GATTAGCGTAAAAAA GACAGCA AAA TGCCGCC TGAATGATAAATCAT hofQ 3946518 - 3945280 - | fimbrial transporter yrfA 3946834 - 3946430 - | hypothetical protein yrfB 3947264 - 3946824 - | hypothetical protein yrfC 3947787 - 3947248 - | putative fimbrial assembly protein (pilN-like) yrfD 3948566 - 3947787 - | putative pilus assembly protein TERM 5359 3948586 - 3948602 + H 82 -12.3 -2.92091 | ATGATCTCCTTATCA CCCGTCA CTC TGACGGG TATATCAATGCGTCT mrcA 3948686 - 3951238 + | fused penicillin-binding protein 1a: murein transglycosylase ; murein transpeptidase TERM 5360 3951239 - 3951266 + T 77 -11.4 -2.83522 | opp_overlap 3951246, overlap 3951246 3951255 3951257 CAGGAATTGTTCTGA TTAAAAAGGCGC TTCA GCGCCTTTTTCA GTTTGCTGACAAAGT TERM 5361 3951259 - 3951246 - T 91 -9.5 -4.72272 | opp_overlap 3951239 3951246 3951255 3951257 TGTTCTGATTAAAAA GGCGC TTCA GCGCC TTTTTCAGTTTGCTG TERM 5362 3951246 - 3951259 + T 91 -9.5 -4.82855 | opp_overlap 3951246, overlap 3951239 3951255 3951257 TGTTCTGATTAAAAA GGCGC TTCA GCGCC TTTTTCAGTTTGCTG nudE 3951966 - 3951406 - | ADP-ribose diphosphatase igaA 3952286 - 3954421 + | intracellular growth attenuator protein TERM 5363 3954463 - 3954422 - f 77 -9.5 -3.67775 | gap 1, opp_overlap 3954426, overlap 3954425 AGCCTTATCGAATAA CACGTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT-TG CTTCACTCTGGAGAT TERM 5364 3954461 - 3954425 - f 81 -12.3 -2.64872 | opp_overlap 3954426, overlap 3954422 CTTATCGAATAACAC GTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT TGCTTCACTCTGGAG TERM 5365 3954426 - 3954460 + F 100 -18 -3.39142 | opp_overlap 3954425 3954422 TTATCGAATAACACG TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA yrfG 3954486 - 3955154 + | putative hydrolase TERM 5366 3955210 - 3955220 + G 75 -4.6 -4.82901 | CTGGATAAATGGCTA TGGG CTG CCCG TTTTTATAAAACCCG hslR 3955165 - 3955566 + | ribosome-associated heat shock protein Hsp15 TERM 5367 3955918 - 3955893 - g 93 -10.4 -4.45577 | opp_overlap 3955892 AGAAATTCCAGAAAA TGCCGACCTG AAAACG CTGGTCGGCA ATGGTTACGTGGTGA TERM 5368 3956040 - 3956050 + G 74 -2.4 -5.06414 | opp_overlap 3956037 GCGTTCTGAACAGCT GCCG ACG CGCC TTTTTATTCGCACCG hslO 3955591 - 3956469 + | heat shock protein Hsp33 TERM 5369 3956478 - 3956501 + T 100 -16.8 -4.12188 | opp_overlap 3956473 3956489 TCATTAATGAGTATG TCCGGCAGAG AGGG CTCTGCCGGA TTTTACGACTAATAC yhgE 3958256 - 3956532 - | conserved hypothetical protein; putative inner membrane protein TERM 5370 3957873 - 3957859 - G 77 -6.4 -4.60041 | opp_overlap 3957858 ACTGACTGGTAAAAA TAGCCA TAG CGGCTA CTGTCATTGCGGATG TERM 5371 3958122 - 3958110 - G 78 -7.7 -4.34771 | TAAAACGGATGAAAA TGCGA CGG TCGCA GGCACGCCATAAACA ECUMN_3861 3958463 - 3958332 - | hypothetical protein TERM 5372 3958498 - 3958519 + H 76 -3 -5.26918 | overlap 3958499 CGATAATAGCAACCG TTTCGTGA CAGGAA TCACGGAG TTTTTTGTCAAATAT TERM 5373 3960228 - 3960209 - g 73 -11.4 -2.59797 | overlap 3960208 3960206 CTTCGATAAATACAC CGACACCC CTGC GGGTGCCG CGCTGGTAGCGGCTG pck 3958635 - 3960257 + | phosphoenolpyruvate carboxykinase TERM 5374 3960306 - 3960327 + T 100 -13 -4.46835 | opp_overlap 3960306 TTATAGAAAGCAAAA CGGGAGGC ACCTTC GCCTCCCG TTTATTTACCCTTCT TERM 5375 3960327 - 3960306 - T 100 -13.7 -4.65153 | opp_overlap 3960306 TTATAGAAAGCAAAA CGGGAGGCA CCTT CGCCTCCCG TTTATTTACCCTTCT envZ 3961685 - 3960333 - | sensory histidine kinase in two-component regulatory system with OmpR TERM 5376 3961630 - 3961598 - G 73 -12 -2.73443 | overlap 3961597 GCACCACCAGATAAG TCGTCACCAGGCTG ACGAA CAGCAAGGTGACGA TGAGCAATAACGTAC ompR 3962401 - 3961682 - | DNA-binding response regulator in two-component regulatory system with EnvZ TERM 5377 3961921 - 3961907 - G 77 -10 -3.62096 | opp_overlap 3961913 3961918, overlap 3961911 CTTCAGTACCGCAAA CTCACC GCT GGTGAG CGGCATCGGCTCATC greB 3962629 - 3963105 + | transcription elongation factor TERM 5378 3965095 - 3965074 - g 84 -7.9 -4.62904 | gap 1, opp_overlap 3965073 3965072, overlap 3965075 AAAGAGCTGGAAAAA CCGGGTCGCG ATC CGCGTCC-GG AATTTAAAACCGCTC yhgF 3963202 - 3965523 + | transcriptional accessory protein TERM 5379 3965643 - 3965622 - f 93 -10.9 -4.52589 | gap 1, opp_overlap 3965623 3965624, overlap 3965623 3965624 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGC-C TTTTTATTCCACAGC TERM 5380 3965643 - 3965623 - f 80 -11.1 -3.31232 | opp_overlap 3965623 3965624, overlap 3965622 3965624 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAGC TERM 5381 3965623 - 3965643 + F 100 -11.1 -5.06414 | opp_overlap 3965622 3965623 3965624, overlap 3965624 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAGC TERM 5382 3965642 - 3965624 - f 89 -14.6 -2.58418 | opp_overlap 3965623 3965624, overlap 3965622 3965623 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAG TERM 5383 3965624 - 3965642 + F 100 -14.6 -3.63367 | opp_overlap 3965624 3965622 3965623, overlap 3965623 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAG feoA 3965980 - 3966207 + | ferrous iron transporter, protein A TERM 5384 3967071 - 3967082 + G 74 -5.8 -4.53036 | TGCTCAACCGTTTCC TCGG TCTG CCGA TTTTCCTCTTTGTGA TERM 5385 3967854 - 3967836 - g 77 -8.2 -4.11216 | overlap 3967849 CTCTGAGCGGGAAAA TCGTCGAT AAC ATCAACGA CTCGGCGCTGGCTTC feoB 3966224 - 3968545 + | fused ferrous iron transporter, protein B: GTP-binding protein ; membrane protein yhgG 3968545 - 3968781 + | putative DNA-binding transcriptional regulator TERM 5386 3968808 - 3968832 + F 100 -12.2 -4.66163 | gap 1, opp_overlap 3968808 CGCCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTGCGTGCGGCT TERM 5387 3968832 - 3968808 - f 93 -12.2 -4.07568 | gap 1, opp_overlap 3968808 CGCCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTGCGTGCGGCT TERM 5388 3968871 - 3968859 - f 80 -6.3 -4.82901 | GGCTTTCCATAAAAA TGCAA CCC TTGCA ACGCGACGTAAATTC TERM 5389 3969010 - 3968994 - g 71 -2.9 -4.77036 | overlap 3968997 CGCCATGAGCAAAAA GCAGAGT TCC ACCCCAC ACGATGCGCTGTTCA yhgA 3968983 - 3969876 + | putative transposase TERM 5390 3970055 - 3970081 + T 74 -10.8 -2.71712 | overlap 3970054 AGAAGAGTTGGCTGC GGCGAGTCAGTA AAG TTCTGTCTCGCC ATTTCAAAAGCCACC bioH 3970866 - 3970096 - | carboxylesterase of pimeloyl-CoA synthesis TERM 5391 3970169 - 3970156 - G 70 -5.2 -4.44046 | opp_overlap 3970156 CGGATGCGAAATAAA CGGC GCATGG GCCG CTTTGGCGAAGATGT TERM 5392 3970552 - 3970541 - G 72 -7.2 -4.27443 | overlap 3970538 CGAGCACTAAAACAA GGCG ACGA CGCC ACGGTGACCAGTGCC gntX 3970904 - 3971587 + | gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system gntY 3971646 - 3972221 + | putative gluconate transport associated protein gntT 3972582 - 3973898 + | gluconate transporter, high-affinity GNT I system TERM 5393 3973937 - 3973902 - T 74 -9.8 -3.32963 | gap 1, overlap 3973904 3973905 ATGGTGATTTGATAA CACTGACTGCCGGATGC ATC GCATCCGGCA-TCAACC GCACCCTACTACTTC TERM 5394 3973935 - 3973904 - T 95 -14.6 -3.23393 | gap 1, overlap 3973902 3973905 GGTGATTTGATAACA CTGACTGCCGGATGC ATC GCATCCGGCA-TCAA CCGCACCCTACTACT TERM 5395 3973934 - 3973905 - T 100 -15.9 -2.53822 | gap 1, overlap 3973904 3973902 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGGCA-TCA ACCGCACCCTACTAC malQ 3976027 - 3973946 - | 4-alpha-glucanotransferase (amylomaltase) TERM 5396 3974042 - 3974054 + g 74 -3.3 -4.93296 | AAGCGTTGCGGAGAG CTTGC GCC GCCAG TTTTTATACTGGTAA TERM 5397 3974980 - 3974966 - G 74 -10 -3.56092 | overlap 3974967 CCAGCAGGCGGCAAA CTGGCT GTA AGCCAG CCACTGCAACCAGAG TERM 5398 3975872 - 3975898 + g 85 -13.1 -3.18582 | gap 1, overlap 3975869 3975868 3975889 3975890 GACATTCGGGACTGG CGTTACCGCCAC TTTC GTGGCGGTA-CG TTGATGCATCGCGTC malP 3978430 - 3976037 - | maltodextrin phosphorylase TERM 5399 3976947 - 3976963 + g 70 -3.7 -4.62872 | TATTGCTGACGGAAT TTCGC ATCATCA GCGAA TTTTTCCAGATTGAT TERM 5400 3977614 - 3977630 + g 72 -5.1 -4.57073 | CACACTGGAAGTATT GCTGC ATCAGGC GCAGC TTTTTACCGGCAGTA TERM 5401 3978864 - 3978881 + H 70 -6.3 -4.20084 | gap 1, overlap 3978864 3978866 GTACAACCCAGCATT C-ACGCTG TAT CAGCGTCG TTTTAGGTGAGTCAT TERM 5402 3979362 - 3979350 - g 72 -5.5 -4.58663 | overlap 3979351 ACGATGGCGCAAAAA CGGCA ATA TGCCA GTCTGACGTCACTCT TERM 5403 3981221 - 3981203 - g 70 -4.4 -4.46267 | opp_overlap 3981206 3981209, overlap 3981205 AGAACTCAATGAAAA CGCCCGCA GTC TGCGGTTG ATGAGCGATCTCAAC malT 3979053 - 3981758 + | fused conserved hypothetical protein ; DNA-binding transcriptional activator, maltotriose-ATP-binding rtcA 3982817 - 3981801 - | RNA 3'-terminal phosphate cyclase rtcB 3984047 - 3982821 - | hypothetical protein TERM 5404 3983950 - 3983937 - G 77 -5.9 -4.65263 | opp_overlap 3983935 3983937 ATGTTTGAAAATAAA CGGCA TCTT CGCCG TATTAATAAGTTGCT TERM 5405 3984316 - 3984326 + G 77 -6.8 -4.55295 | opp_overlap 3984315 GCGCTGGTCGAAATG GCGT CCG ACGC TTTGTTTATGCCAGC TERM 5406 3984692 - 3984674 - g 81 -6.6 -4.61482 | overlap 3984677 CCGCGCAAAAAAGAA CAACCGCG CGG CGCAGGTG AAGTGACGATTATCG TERM 5407 3984689 - 3984677 - g 75 -6.9 -4.40692 | overlap 3984674 CGCAAAAAAGAACAA CCGCG CGG CGCAG GTGAAGTGACGATTA TERM 5408 3985703 - 3985715 + G 72 -4.7 -4.70879 | AAGTCACTTTCTGCT GCCGG ACG CCAGC TTTTTGACGTTTCGC rtcR 3984236 - 3985834 + | sigma 54-dependent transcriptional regulator of rtcBA expression glpR 3986574 - 3985816 - | DNA-binding transcriptional repressor TERM 5409 3986328 - 3986340 + g 74 -2.6 -5.12068 | GCTCCGCCACTTTGC GGGC AATAC GCTC TTTTTCTTCGGTCTG glpG 3987421 - 3986591 - | putative intramembrane serine protease TERM 5410 3987275 - 3987234 - G 74 -10.1 -3.48276 | opp_overlap 3987223 3987234, overlap 3987235 3987261 CTGGCCGCCAGATAA CGCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGCC CGCACGCGCTCGGCC TERM 5411 3987274 - 3987235 - G 84 -13.6 -2.68823 | opp_overlap 3987223 3987234, overlap 3987234 3987261 TGGCCGCCAGATAAC GCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGC CCGCACGCGCTCGGC TERM 5412 3987281 - 3987261 - G 75 -6.7 -4.36914 | overlap 3987235 3987234 GGGTTTTCGAGAAAA CGCGCCAGC TCC GCCCGCACG CGCTCGGCCTGGGAC TERM 5413 3987395 - 3987377 - G 72 -5.8 -4.33621 | overlap 3987373 3987379 CATGTAATCAACAAA CGCCTGCG CCA CGCGGGGG TTAGCAAAAGAGGTA glpE 3987792 - 3987466 - | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 5414 3987932 - 3987947 + H 70 -7.6 -3.95219 | opp_overlap 3987932 GATTCTTTGCTAATA TGTTCG ATAA CGAACA TTTATGAGCTTTAAC TERM 5415 3988898 - 3988888 - g 81 -4.6 -5.0538 | GTGCACTTTAAAAAA CAGC TTA GCCG TGACGATATCGTCTG glpD 3987982 - 3989487 + | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding ECUMN_3885 3991145 - 3989994 - | putative fimbrial adhesin TERM 5416 3990099 - 3990117 + g 72 -6.6 -4.15453 | overlap 3990095 AGTCACATCTGCCGT CTGAGCTG ACT CAGCCCGG TTTTCAACTAACTTA ECUMN_3886 3991941 - 3991138 - | putative periplasmic pilin chaperone TERM 5417 3991758 - 3991768 + gr 70 -4 -4.62069 | TAACCAGCATATCTT TACT GGC AGTA TTTTTAAGCTCGACC ECUMN_3887 3992407 - 3991883 - | putative exported fimbrial-like adhesin protein TERM 5418 3992067 - 3992056 - GR 72 -4.4 -4.72272 | TGTTGTTATCAAAAA TAGC CAGT GCTA ACCCATCGACTGAGC ECUMN_3888 3992987 - 3992415 - | putative fimbrial minor structural subunit TERM 5419 3992510 - 3992520 + g 70 -6.8 -4.1023 | opp_overlap 3992510 3992509 GTTTAAAGGTTAAAC TGGC ATC GCCA TTATTATTTAAAATT aufC 3995569 - 3992978 - | putative outer membrane export usher protein AufC TERM 5420 3993934 - 3993946 + g 74 -6.3 -4.51224 | TATTATAGCCGACCT GATAC AAG GTATC TTTATTATTCGTATT ECUMN_3890 3996363 - 3995611 - | putative fimbria chaperone protein precursor TERM 5421 3996480 - 3996427 - R 73 -5 -4.59342 | gap 2, opp_overlap 3996406 3996404 3996437 3996440, overlap 3996437 3996440 3996473 TTTATTACAAATAAA CATGTAATATTAATTTCAGGTTACAA GTAA CTGTAACCTGAAATTA-TCTTGC-TG TAATTATTCGTACAG TERM 5422 3996437 - 3996472 + r 95 -15.1 -3.2326 | opp_overlap 3996437 3996427 3996440, overlap 3996440 ATAAACATGTAATAT TAATTTCAGGTTACA AGTAAC TGTAACCTGAAATTA TCTTGCTGTAATTAT TERM 5423 3996472 - 3996437 - R 100 -15.8 -2.5084 | opp_overlap 3996437 3996440, overlap 3996427 3996440 ATAAACATGTAATAT TAATTTCAGGTTACAA GTAA CTGTAACCTGAAATTA TCTTGCTGTAATTAT TERM 5424 3996469 - 3996440 - R 95 -13.1 -3.39187 | opp_overlap 3996437 3996440, overlap 3996437 3996427 AACATGTAATATTAA TTTCAGGTTACAA GTAA CTGTAACCTGAAA TTATCTTGCTGTAAT TERM 5425 3996440 - 3996469 + r 100 -12.4 -3.74383 | opp_overlap 3996440 3996437 3996427, overlap 3996437 AACATGTAATATTAA TTTCAGGTTACA AGTAAC TGTAACCTGAAA TTATCTTGCTGTAAT aufA 3997188 - 3996484 - | Auf fimbriae major fimbrial subunit AufA TERM 5426 3996632 - 3996644 + g 82 -9.1 -4.21142 | opp_overlap 3996632 3996629 GCTGCTGAAGAACTA CTCCC CTG GGGAG TTTGTGTGTTCAGCT TERM 5427 3997611 - 3997655 + r 71 -8.6 -3.47349 | gap 1, opp_overlap 3997612, overlap 3997612 TTATCTGATATAAAA ATGCCGTGTG-CCCCTTAACG ATAG CTTTGAGGGAACACACGGCAG TTATCACTTTGCAAA TERM 5428 3997612 - 3997654 + r 79 -12.1 -2.68088 | gap 1, opp_overlap 3997612, overlap 3997611 TATCTGATATAAAAA TGCCGTGTG-CCCCTTAACG ATAG CTTTGAGGGAACACACGGCA GTTATCACTTTGCAA TERM 5429 3997654 - 3997612 - R 100 -12.1 -4.9792 | gap 1, opp_overlap 3997612 3997611 TATCTGATATAAAAA TGCCGTGTG-CCCCTTAACG ATAG CTTTGAGGGAACACACGGCA GTTATCACTTTGCAA glgP 4000119 - 3997672 - | glycogen phosphorylase TERM 5430 3997911 - 3997890 - G 72 -10.1 -3.38316 | opp_overlap 3997889 TGATCAGCGAATCAA CCAGATCGC GATA GCGACCCGG ATCTTCCGGACTGAA TERM 5431 3999737 - 3999769 + g 72 -4.5 -4.72497 | overlap 3999738 3999740 AAGCAAGCCGCCAGA CGTCCCAGGCCACCG TTA CCGAGGCCCGGGTCA TTTTCTTCATCAATC glgA 4001571 - 4000138 - | glycogen synthase TERM 5432 4000805 - 4000817 + g 82 -7.7 -4.46212 | opp_overlap 4000798 AACAGTAAGTCCGTC TCTGG ACT CCAGA TTTTCTCGTCCACGC glgC 4002866 - 4001571 - | glucose-1-phosphate adenylyltransferase TERM 5433 4002375 - 4002389 + g 84 -7.8 -4.60487 | opp_overlap 4002374 4002375 TGGCATACAAGCAAC GGTGCA ACG TGCGCC TTTTTCGACGTGGTC glgX 4004857 - 4002884 - | glycogen debranching enzyme TERM 5434 4004490 - 4004461 - G 70 -10 -3.2056 | opp_overlap 4004477 AGTCATAGTGATCAA CCACCACTACGC ATTTCG GCGCAATGGCGG CGTTGTCGCGATAGT glgB 4007040 - 4004854 - | 1,4-alpha-glucan branching enzyme TERM 5435 4005431 - 4005441 + g 83 -5.4 -5.0538 | overlap 4005412 4005409 TCGCCCGGCATCCGG TCGA GAA TCGA TTTTTTACCGTGGAC TERM 5436 4006317 - 4006335 + g 91 -7.4 -5.09173 | CATAAATAGAGATTG GCGCATCA AAC TGATTCGC TTTTTTGCGCTCTTC TERM 5437 4007294 - 4007277 - R 72 -9.8 -3.15996 | opp_overlap 4007275 4007274, overlap 4007275 TATTACGCACTAACA GGGGCG GCATCG CGCCCC AGATTTAATGAATAA asd 4008416 - 4007313 - | aspartate-semialdehyde dehydrogenase, NAD(P)-binding yhgN 4008608 - 4009201 + | putative antibiotic transporter TERM 5438 4009249 - 4009224 - T 95 -12.6 -3.63922 | overlap 4009222 AGTTTTTCGAAAAGA GCCCGGTAGC GTCACA ACTACCGGGC GAACAAACTTAACTC gntU 4010598 - 4009258 - | gluconate transporter, low affinity GNT 1 system TERM 5439 4010155 - 4010131 - G 85 -13.5 -3.21099 | CCCCGGTACCAGGAA CGCAGCCGCGG CCG CCACGCCTGCG AATAATGGGATTACC TERM 5440 4010573 - 4010545 - G 73 -3.9 -4.77036 | overlap 4010547 4010548 CTTCATGACTAAAAA CAGCAGCAG TAAAACAGACC CTACTGCTG TTAAAACAAGCGTTA gntK 4011129 - 4010602 - | gluconate kinase 2 ; gluconate transport, GNT I system TERM 5441 4011187 - 4011161 - R 93 -5.2 -5.50774 | opp_overlap 4011161 TACAAGAAATAAAAA TGTTACGGGTAA CTG TTATCGGTAACA TTGTCCGGCCGGACA gntR 4012263 - 4011268 - | DNA-binding transcriptional repressor TERM 5442 4011992 - 4012004 + g 76 -9.1 -3.75629 | opp_overlap 4011987 GTTTGATAACCGTGC GCGTC GGT GACGC TTTCGATTCCGCGTA TERM 5443 4012437 - 4012406 - R 82 -10 -4.10429 | overlap 4012396 AACGACGCGGCAAAA CCCCGGAAGCGTAC ATCA GCACGCGACCGGAG CGAGTGAGGAAGCCT yhhW 4013182 - 4012487 - | hypothetical protein yhhX 4014342 - 4013305 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain ECUMN_3904 4014561 - 4014376 - | hypothetical protein TERM 5444 4014485 - 4014469 - G 100 -9.4 -6.21477 | AAGATCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAATACTGGAA yhhY 4014677 - 4015165 + | putative acetyltransferase TERM 5445 4015173 - 4015197 + F 72 -10.1 -2.90723 | TGAAGTAAGATAGTG CCCTTTTTCTG AGA TGGAAAAAGGG TGTCATTCAAAATCG TERM 5446 4015216 - 4015232 + F 73 -5.2 -4.65933 | CATTCAAAATCGGCA TACCTT CCTTT AAGGTA TTTATTTTCCCAATA yhhZ 4015401 - 4016579 + | hypothetical protein yrhA 4016576 - 4017070 + | hypothetical protein yrhB 4017520 - 4017804 + | hypothetical protein TERM 5447 4017838 - 4017808 - T 100 -14.9 -3.28712 | gap 1, opp_overlap 4017805, overlap 4017810 GGCTTGCCCTGACAA TA-CGGCCCTCTTC CCAC GAAGAGGGCCGCTA ACCTTAATACCCCGC TERM 5448 4017835 - 4017810 - T 100 -19.1 -3.21276 | opp_overlap 4017805, overlap 4017808 CTTGCCCTGACAATA CGGCCCTCTTC CCAC GAAGAGGGCCG CTAACCTTAATACCC ggt 4019584 - 4017842 - | gamma-glutamyltranspeptidase TERM 5449 4019558 - 4019575 + g 90 -9.1 -4.51699 | opp_overlap 4019542 AGCAGCAATGGCCAC CCGGCGT AAAA ACGTCGG TTTTATCATCGTTAT TERM 5450 4019726 - 4019739 + G 72 -8.1 -3.95219 | overlap 4019736 GACTTCTGATTCTTA CGGCA CTCC TGCCG TTTGTCGGCTTTGCA yhhA 4019704 - 4020144 + | hypothetical protein ugpQ 4020874 - 4020131 - | glycerophosphodiester phosphodiesterase, cytosolic TERM 5451 4020192 - 4020223 + g 95 -12.2 -4.17556 | gap 1, opp_overlap 4020190 4020186 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GCCGC-GCGCTGGGG TTTATTGACGGTATA ugpC 4021941 - 4020871 - | glycerol-3-phosphate transporter subunit ; ATP-binding component of ABC superfamily TERM 5452 4021535 - 4021479 - G 81 -11 -3.65071 | gap 4, overlap 4021477 4021480 4021497 CATCAAACAAGAACA CCGACGGATC-GCGCACAATCGCGCGGC CCATC GCCACACG-CTG-GCGCTGA-CCGCCGG AAAGCTCGCGCGGGC TERM 5453 4021511 - 4021480 - G 77 -12.2 -2.77958 | overlap 4021477 4021479 4021497 ATCAAACAAGAACAC CGACGGATCGCGCA CAAT CGCGCGGCCCATCG CCACACGCTGGCGCT ugpE 4022788 - 4021943 - | glycerol-3-phosphate transporter subunit ; membrane component of ABC superfamily TERM 5454 4022246 - 4022232 - G 75 -5.7 -4.65263 | ATGTCGCAAAAGAAA CGCAT TGGTG ATGCG CCGTCGATCCGCGCG ugpA 4023672 - 4022785 - | glycerol-3-phosphate transporter subunit ; membrane component of ABC superfamily ugpB 4025086 - 4023770 - | glycerol-3-phosphate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5455 4025114 - 4025127 + r 71 -5.2 -4.46212 | opp_overlap 4025112 4025124, overlap 4025113 TTGTTGTACCGAATG CGCG AATTCA CGCG TTTTATGCTCGCGGG TERM 5456 4025465 - 4025450 - R 73 -9 -3.54459 | opp_overlap 4025442 4025444 4025450 GTAACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG TERM 5457 4025450 - 4025465 + r 71 -9 -3.35996 | opp_overlap 4025450, overlap 4025442 4025444 GTAACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG livF 4026197 - 4025484 - | leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily TERM 5458 4025750 - 4025728 - G 70 -4.7 -4.51994 | TCAAGCAACAATAAA CGCGGGTTG CTCAT CAGCGCGCG ACCAATCGCCAGCAT livG 4026966 - 4026199 - | leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily livM 4028240 - 4026963 - | leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily livH 4029163 - 4028237 - | leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily TERM 5459 4029044 - 4029028 - G 83 -10.1 -4.14541 | opp_overlap 4029028 TACCAATCATATAAA CCTCGCC GTG GGCGAAG TTGATCATGCCGATA TERM 5460 4029203 - 4029181 - R 77 -10.5 -3.55622 | overlap 4029182 GGTAACCTTTCTAAA CCCGCCCGT TTTTC ACGGGCGGT GGGATGATCACTTGG TERM 5461 4029202 - 4029182 - R 86 -14 -2.73159 | overlap 4029181 GTAACCTTTCTAAAC CCGCCCGT TTTTC ACGGGCGG TGGGATGATCACTTG livK 4030320 - 4029211 - | leucine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5462 4029746 - 4029710 - G 74 -8.7 -3.87075 | ATCAGCGCGGAGAAA TCTTTCTCCCCGGCGGT AAT ACCGTCGAAGAAAACGA CGTTGGCATTGGCTG TERM 5463 4030688 - 4030678 - H 100 -3.2 -5.88476 | AAAAGAAATAAAAAA GAGA AAG CCTC CGATTAAATTATTTC yhhK 4030744 - 4031127 + | hypothetical protein TERM 5464 4031299 - 4031319 + T 74 -9.7 -3.30554 | opp_overlap 4031291 4031295, overlap 4031300 GATATTAGCAATTTG GCGGCAACT CCA AGTTGCCGA TTAATGATTACTTCG TERM 5465 4031300 - 4031318 + T 84 -13.2 -2.5785 | opp_overlap 4031291 4031295, overlap 4031299 ATATTAGCAATTTGG CGGCAACT CCA AGTTGCCG ATTAATGATTACTTC livJ 4032430 - 4031327 - | leucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5466 4032158 - 4032169 + g 70 -5.8 -4.15044 | CACATATTTAATGCC GTCG TTAA CGAC TTTGTTCGCCACCGC TERM 5467 4032680 - 4032661 - R 100 -10 -5.75538 | opp_overlap 4032661 CCCAAAAAACAAAAA CCCCGGAT TCTC ATCCAGGG TTCTCTGCTTAATAG rpoH 4033556 - 4032702 - | RNA polymerase, sigma 32 (sigma H) factor ftsX 4034859 - 4033801 - | transporter subunit: membrane component of ABC superfamily ftsE 4035520 - 4034852 - | transporter subunit: ATP-binding component of ABC superfamily ftsY 4037019 - 4035523 - | fused Signal Recognition Particle (SRP) receptor: membrane binding protein ; conserved hypothetical protein TERM 5468 4037191 - 4037178 - gH 87 -4.5 -5.1861 | overlap 4037186 TTTATCATGAAAAAA CCGAA TCAT TCCGG CAGCGGCCAGATCCG yhhF 4037169 - 4037765 + | putative methyltransferase TERM 5469 4037943 - 4037979 + GT 75 -8.9 -3.62572 | gap 1, opp_overlap 4037926 4037942, overlap 4037946 TGGCCCGCAGATGAC CACCGCCGAAAAGG TGCGGATTTT CCTTTTCGGCG-TG TTTGAACTGCTGGTC TERM 5470 4037946 - 4037977 + GT 85 -11.7 -3.39018 | opp_overlap 4037942, overlap 4037943 CCCGCAGATGACCAC CGCCGAAAAGG TGCGGATTTT CCTTTTCGGCG TGTTTGAACTGCTGG ECUMN_3928 4037632 - 4038024 + | hypothetical protein yhhM 4038386 - 4038027 - | hypothetical protein TERM 5471 4038758 - 4038772 + G 71 -3.4 -4.8048 | overlap 4038759 4038760 CGTCAACGTCTGATG TACGCC ATC GGCGCG TTTTTCCTCTCGCAC yhhN 4038527 - 4039153 + | conserved hypothetical protein; putative inner membrane protein TERM 5472 4039164 - 4039183 + F 81 -12.2 -3.01984 | opp_overlap 4039160 4039159 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA TERM 5473 4039960 - 4039939 - g 83 -10.1 -4.14725 | CACTGAAACCAGAAA CCGCCACGC GCCT GCGTAACGG TGAGCGTGAAGAGGT zntA 4039227 - 4041425 + | zinc, cobalt and lead efflux system TERM 5474 4041433 - 4041457 + T 100 -18.7 -3.21099 | opp_overlap 4041429 4041430 4041428 GGAAGTAAAAGTGTT GCCTGATAGCC TCT GGCTATCAGGC TTAGTGCTGAGGCGG ECUMN_3932 4041766 - 4041458 - | hypothetical protein; putative membrane protein TERM 5475 4041870 - 4041856 - R 82 -7.8 -4.4767 | overlap 4041857 GTAGCCATGATAAAA CGCGAC AGC GTCGCA TCAGGCATTGCGCAC TERM 5476 4041869 - 4041857 - R 71 -9.1 -3.2812 | overlap 4041856 TAGCCATGATAAAAC GCGAC AGC GTCGC ATCAGGCATTGCGCA tusA 4042226 - 4041981 - | sulfurtransferase TERM 5477 4042081 - 4042065 - G 70 -4.3 -4.52803 | overlap 4042076 CATAAAGGTACAAAA CCCAGGA ATA TCGCGGG TCGTCGCCGGATCGT TERM 5478 4042899 - 4042917 + G 95 -6.6 -5.1963 | overlap 4042900 CACACTGTTCGGTAA CGTCAGCG ACA CGCTGGCC TTTTTCTTCATTGCC TERM 5479 4042900 - 4042916 + G 77 -10.1 -3.70694 | overlap 4042899 ACACTGTTCGGTAAC GTCAGCG ACA CGCTGGC CTTTTTCTTCATTGC yhhQ 4042447 - 4043112 + | conserved hypothetical protein; putative inner membrane protein dcrB 4043185 - 4043742 + | periplasmic protein TERM 5480 4043760 - 4043787 + T 100 -6.2 -5.52384 | opp_overlap 4043755 4043760 4043772, overlap 4043761 TTTAAGATGATGAGA TGGCCTCAGG AACTTCCA CCGGAGGCCG TTTTTTTAATCGCCA TERM 5481 4043761 - 4043786 + T 70 -7.5 -3.90707 | opp_overlap 4043755 4043760 4043772, overlap 4043760 TTAAGATGATGAGAT GGCCTCAGG AACTTCCA CCGGAGGCC GTTTTTTTAATCGCC yhhS 4044963 - 4043746 - | putative transporter TERM 5482 4045507 - 4045491 - g 75 -5.1 -4.60041 | opp_overlap 4045505 ATGGACTCGGAAAAA GTGGTTA CCT TCACCAC GGCGCTAATGACCGG yhhT 4045095 - 4046144 + | conserved hypothetical protein; putative inner membrane protein TERM 5483 4046166 - 4046192 + F 86 -10.9 -4.05788 | opp_overlap 4046166 CTCCTGAGCAGGCAA TGGCCACCGTT TATCT AACAGTGGCCA TTTGATTTGAGGAAA TERM 5484 4046192 - 4046166 - f 86 -13.1 -3.09516 | opp_overlap 4046166 CTCCTGAGCAGGCAA TGGCCACCGTT TATCT AACAGTGGCCA TTTGATTTGAGGAAA TERM 5485 4046311 - 4046323 + F 79 -4.9 -5.11063 | CAAAGAATGCACTGA TAACA TTG TGTTA TTTTTATTGCCTCAT ECUMN_3938 4046524 - 4046913 + | putative lipoprotein TERM 5486 4046944 - 4046926 - f 71 -10.2 -2.72461 | opp_overlap 4046923 4046921 4046920, overlap 4046925 TAATTCTTCCTAAAG TCGGGCCG CTG CGGTCCGA TAATAATTTAATTCC ECUMN_3939 4046973 - 4048040 + | putative methyltransferase ECUMN_3940 4048057 - 4048803 + | hypothetical protein ECUMN_3941 4048782 - 4049621 + | putative 1-acylglycerol-3-phosphate O-acyltransferase ECUMN_3942 4049596 - 4049853 + | putative acyl carrier protein ECUMN_3943 4049865 - 4050116 + | putative acyl carrier protein 2 ECUMN_3944 4050121 - 4050702 + | hypothetical protein TERM 5487 4050861 - 4050877 + GF 70 -5.1 -4.39652 | GGTGAACGCTGGGCG CTGTGCT TTG AGAACAG TTATTTGTTTATCGT TERM 5488 4050941 - 4050925 - gf 72 -5 -4.59109 | opp_overlap 4050916, overlap 4050927 TACACGCCGGAAAAA CGCCGG TGCTT CCGGGG CATAACCGTGTCATC TERM 5489 4051397 - 4051410 + GF 71 -8.1 -3.85698 | opp_overlap 4051396 GGCATTTTTGAAACG GCTGG ATAC CCAGC TTTCTCCGCCGCCCG ECUMN_3945 4050660 - 4052060 + | putative fatty acid degradation enzyme TERM 5490 4052216 - 4052228 + GF 70 -6.2 -4.28375 | CGCTCACTCTGCTCG CGCC TGGCT GGCG TTTTCACTCTATTCA ECUMN_3946 4052017 - 4052400 + | putative fatty acid degradation enzyme TERM 5491 4053406 - 4053388 - g 75 -6.7 -4.37886 | gap 1, overlap 4053389 4053390 CCATGCTCGACAAAA TCGCCAGC TGGC GC-GGCGA GCTGCAACTCGGGCG TERM 5492 4053998 - 4054016 + G 90 -10.3 -4.43669 | GGAACATTACGCGCT CCAGTCG CCCCT CGACTGG TTTAATTTTTTCGAT ECUMN_3947 4052391 - 4054067 + | putative acyltransferase ECUMN_3948 4054071 - 4054493 + | putative thioesterase ECUMN_3949 4054490 - 4055095 + | putative outer membrane lipoprotein carrier protein TERM 5493 4056191 - 4056204 + GF 82 -8.1 -4.57569 | CCCCTTCCCCGGCAT TCGCC AGAT GGCGA TTTTTGCCGCCGTCG TERM 5494 4056714 - 4056696 - gf 75 -4.4 -4.75472 | overlap 4056707 CCGACAGTAACAAAA GCACTGCA AAA TGCCGGGC TGGCGGCAGTGAATC TERM 5495 4056722 - 4056707 - gf 70 -6.1 -4.18697 | overlap 4056696 AAAAGCACTGCAAAA TGCCG GGCTGG CGGCA GTGAATCCGGATCTC TERM 5496 4056834 - 4056821 - gf 70 -3.7 -4.59773 | overlap 4056830 GCTGACGCTGAAAAA CGGCG AAAG CGGCG TACTGGTGCCGGTTG ECUMN_3950 4055064 - 4057382 + | putative transporter ECUMN_3951 4057379 - 4057963 + | putative lipoprotein TERM 5497 4058358 - 4058374 + G 70 -5.7 -4.3739 | opp_overlap 4058358, overlap 4058360 4058362 TATGCACAACAAGAG CTCGGCG ATC CGTCGCG TTTTCTCAGCCACTG ECUMN_3952 4057956 - 4059134 + | putative 3-oxoacyl-[acyl-carrier-protein] synthase TERM 5498 4059531 - 4059514 - g 72 -8.3 -3.75024 | GTGCAGCATCAACAA CGGCACG GCAA CGGGCCG CATTAACACCTTCCA ECUMN_3953 4059131 - 4059595 + | putative 3-hydroxy-fatty acyl-(acyl carrier protein) dehydratase ECUMN_3954 4059595 - 4060326 + | putative 3-oxoacyl-[acyl-carrier-protein] reductase ECUMN_3955 4060323 - 4061552 + | putative beta-ketoacyl-ACP synthase TERM 5499 4061743 - 4061728 - g 72 -8.2 -3.85389 | opp_overlap 4061737, overlap 4061729 GGCGAACAAGGCAAA CCGGCA TTCG CGCCGG AAACGCCGCTATGGT TERM 5500 4061779 - 4061747 - g 82 -11.3 -3.53224 | opp_overlap 4061737, overlap 4061729 4061768 CATTCGCGCCGGAAA CGCCGCTATGGTTCA ACT TAAGCCATAGCGGTG ACGATATCGCCCTGC acpT 4061554 - 4062141 + | holo-(acyl carrier protein) synthase 2 TERM 5501 4062187 - 4062214 + F 70 -7.1 -3.91984 | opp_overlap 4062179 4062177 CAGAACAGGTAATCA GTATGACGAAT ACTTAA AATCGTCATAC TTATTTCCGCCATCT TERM 5502 4062914 - 4062896 - g 81 -6 -4.7497 | GCCAGCGATTAAAAA GATCACCT TTA ACGTGATC CCGGACCCGACTACC nikA 4062252 - 4063826 + | nickel transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5503 4063872 - 4063892 + G 100 -7.5 -5.55664 | overlap 4063875 TGCTGATCCCGATGG TGCTCGCCG CCT CGGTGATCA TTTTTTTGATGCTGC nikB 4063826 - 4064770 + | nickel transporter subunit ; membrane component of ABC superfamily nikC 4064767 - 4065600 + | nickel transporter subunit ; membrane component of ABC superfamily nikD 4065600 - 4066364 + | nickel transporter subunit ; ATP-binding component of ABC superfamily nikE 4066361 - 4067167 + | nickel transporter subunit ; ATP-binding component of ABC superfamily nikR 4067172 - 4067573 + | DNA-binding transcriptional repressor, Ni-binding ECUMN_3963 4067763 - 4068518 + | putative transcriptional regulator ECUMN_3964 4068531 - 4069016 + | putative phosphotransferase system enzyme subunit IIA ECUMN_3965 4069013 - 4069294 + | putative phosphotransferase system enzyme IIB ECUMN_3966 4069341 - 4070729 + | putative phosphotransferase system permease component IIC TERM 5504 4071414 - 4071395 - g 74 -7.8 -4.07687 | opp_overlap 4071403 AGTCGCTCTGCAAAA CGGTTGGG TTCT CGCAACCG GTCAGCGTGACGCTG ECUMN_3967 4070722 - 4072230 + | putative carbohydrate kinase ECUMN_3968 4072220 - 4072489 + | putative phosphocarrier HPr protein of a carbohydrate phosphotransferase system ECUMN_3969 4072520 - 4073371 + | putative aldolase yhhJ 4074586 - 4073462 - | putative transporter subunit: membrane component of ABC superfamily TERM 5505 4073806 - 4073790 - G 70 -10.1 -3.25204 | overlap 4073788 4073786 GTAGTGGCAAACAGA CTGAGCG CCA CGCCCAG CATAAACAGCGGGAT rbbA 4077321 - 4074586 - | fused ribosome-associated ATPase: ATP-binding protein ; ATP-binding protein ; putative membrane protein TERM 5506 4077009 - 4076990 - G 71 -2.1 -5.00884 | AGGCGGGCGAAAAAA TCGACGT TTTCAT ACACCGA CAAGGTGTGGTAGAG yhiI 4078385 - 4077318 - | putative HlyD family secretion protein TERM 5507 4077389 - 4077400 + g 72 -7.2 -4.1964 | overlap 4077381 GCACCCACGCTATGC CCGG CAAA CCGG TTTTGACATATTCCA TERM 5508 4077835 - 4077851 + g 71 -9.4 -3.53012 | ATGATATTGGTGCGT GCCGCT TCTAT AGCGGC TTTAGAAGCCGAAAC TERM 5509 4078434 - 4078454 + r 74 -11.1 -2.80344 | opp_overlap 4078432 4078431, overlap 4078433 CGCGTGTTACAACTG CCGCCGAAC GAC GTTCAGCGG ATTCTTCCATCCGGG yhiJ 4080373 - 4078751 - | hypothetical protein TERM 5510 4078847 - 4078859 + g 71 -9.1 -3.52918 | AGTGGTTATCTCAGG CCCTG CAC CAGGG TTAATTTGGCAATTA TERM 5511 4080571 - 4080535 - R 78 -10.4 -3.60074 | gap 1, opp_overlap 4080537 GAGAAAGTCCCTAAA GATTGTAGAGGCGTCAT CAGT AT-ATGCCTCTACAATC GATTAAGAAAAACTA ECUMN_3974 4082308 - 4080635 - | hypothetical protein ECUMN_3975 4082408 - 4082199 - | hypothetical protein TERM 5512 4082274 - 4082286 + g 77 -6.3 -4.63527 | opp_overlap 4082272 4082274 AAAATAAATGACACA TGTCT GAA AGACA TTTTTACGATGATAC yhiM 4082607 - 4083659 + | conserved hypothetical protein; putative inner membrane protein TERM 5513 4083707 - 4083680 - T 73 -6.4 -4.40358 | gap 1, opp_overlap 4083680 ACGTACCGGATAAAA CCAGCGTTGAC CATTTGC GT-AACGCTGG TTTTTCTCAGGTATC TERM 5514 4083680 - 4083707 + T 80 -6.4 -4.8667 | gap 1, opp_overlap 4083680 ACGTACCGGATAAAA CCAGCGTTGAC CATTTGC GT-AACGCTGG TTTTTCTCAGGTATC TERM 5515 4083767 - 4083782 + T 74 -3.2 -5.04987 | opp_overlap 4083768, overlap 4083768 GTTAAGTATAAAAAA ACAGCA AAGT TGCTGA TTTTTTCAACCTGTT TERM 5516 4083781 - 4083768 - T 100 -6.7 -5.71983 | opp_overlap 4083767 4083768 TTAAGTATAAAAAAA CAGCA AAGT TGCTG ATTTTTTCAACCTGT yhiN 4085176 - 4083974 - | putative oxidoreductase with FAD/NAD(P)-binding domain TERM 5517 4086027 - 4086008 - g 70 -4.2 -4.65933 | overlap 4086004 GAGCGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 4085408 - 4086907 + | phosphate transporter, low-affinity TERM 5518 4086949 - 4086924 - T 70 -8.9 -3.16647 | opp_overlap 4086926, overlap 4086923 4086926 CGCACGCACCAAAAC GAGCGGGTCAG TTTA CTGGCCCGCTT TTTTTATGCGTTATT TERM 5519 4086926 - 4086947 + T 100 -13.7 -5.66684 | opp_overlap 4086924 4086923 4086926 CACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTTA TERM 5520 4086947 - 4086926 - T 81 -11.5 -3.14218 | opp_overlap 4086926, overlap 4086924 4086923 CACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTTA yhiO 4087313 - 4086978 - | putative universal stress (ethanol tolerance) protein B uspA 4087704 - 4088138 + | universal stress global response regulator TERM 5521 4088165 - 4088182 + F 100 -14.1 -4.77757 | CGACGTGTTCCTGAA CGCCCGC ATAT GCGGGCG TTTTGCTTTTTGGCG TERM 5522 4088473 - 4088498 + G 71 -2.5 -4.88129 | gap 1, opp_overlap 4088467 4088464 ATACAACAACACCCA TGGG-GATGCTG CAG CAACCTCGCCCA TTTTTCATGATTTTT TERM 5523 4089490 - 4089471 - g 70 -6.4 -4.1552 | opp_overlap 4089485 4089487 CATCTGGGTAACAAA GGCAAAGA TCTC TCTATGCC GATGAAATTTACTCT TERM 5524 4089520 - 4089530 + G 70 -4.6 -4.58395 | TCGGCATGTTTATGT GCTC ACT GGGC TTTTTGACGGCTGCA yhiP 4088454 - 4089923 + | transporter TERM 5525 4089964 - 4089939 - T 100 -19.1 -3.86346 | opp_overlap 4089939 TTATTCTTGCAGAAA GCAGGGTAGCG ATAA CGCTACCCTGC TTTACTTTTACACCG TERM 5526 4089939 - 4089964 + T 100 -19.1 -4.19735 | opp_overlap 4089939 TTATTCTTGCAGAAA GCAGGGTAGCG ATAA CGCTACCCTGC TTTACTTTTACACCG yhiQ 4090724 - 4089972 - | putative SAM-dependent methyltransferase TERM 5527 4090583 - 4090560 - G 70 -4.6 -4.49531 | gap 1 AACAAAATCAACAAA GATGCCGCCAA GTT TTGGCT-CATC ACGCTTGCGCAATTC TERM 5528 4090678 - 4090699 + g 79 -10.1 -3.794 | opp_overlap 4090680, overlap 4090680 GCCGCCAGAACAGAT AAGGCACCG TCTC CGGTGCCTG TTTCATCAATTAAGC TERM 5529 4090680 - 4090697 + g 86 -12.7 -3.48105 | opp_overlap 4090680, overlap 4090678 CGCCAGAACAGATAA GGCACCG TCTC CGGTGCC TGTTTCATCAATTAA TERM 5530 4090697 - 4090680 - G 91 -12.7 -3.72788 | opp_overlap 4090680 4090678 CGCCAGAACAGATAA GGCACCG TCTC CGGTGCC TGTTTCATCAATTAA prlC 4092774 - 4090732 - | oligopeptidase A TERM 5531 4090816 - 4090838 + g 74 -10.6 -3.21276 | opp_overlap 4090805, overlap 4090815 CAGATCCATCGGCTC TTCTGAACCG CCA CGGCTCAGAA TGTTGTCGAGGAACG TERM 5532 4092377 - 4092390 + g 79 -2.3 -5.24531 | overlap 4092369 TCGAAGTCGCGCAGT GCGTT ATCA ACCGC TTTTTTCTGAGCCGT TERM 5533 4092930 - 4092949 + H 75 -4.8 -4.8622 | overlap 4092931 CTGATAGGCTTTTGT GCGCCCCG AATA CGGGCCGA TTTTTACTTACCGGA TERM 5534 4092931 - 4092948 + H 71 -8.3 -3.5125 | overlap 4092930 TGATAGGCTTTTGTG CGCCCCG AATA CGGGCCG ATTTTTACTTACCGG TERM 5535 4093418 - 4093400 - g 77 -6.6 -4.56597 | GCGCGCGTCGAAAAA GCCGATGG CTT CCAGCAGC TTAAGGCCAAACTGC TERM 5536 4093502 - 4093488 - g 75 -5.6 -4.58773 | CGTATGAAATGAAAA CCGACT ATC AGGCGG TGGTCAGCGGGATAG yhiR 4092977 - 4093819 + | putative DNA (exogenous) processing protein gor 4093891 - 4095243 + | glutathione oxidoreductase TERM 5537 4095278 - 4095252 - f 100 -13.8 -3.71649 | opp_overlap 4095245 4095252 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG TERM 5538 4095252 - 4095278 + F 100 -16 -3.43217 | opp_overlap 4095252, overlap 4095245 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG ECUMN_3987 4095402 - 4095581 + | hypothetical protein TERM 5539 4095739 - 4095707 - f 100 -16.6 -3.03243 | opp_overlap 4095716, overlap 4095716 ACTCAGGGCTGAAGA GTAAAAAAACCGAC GCGAA GTCGGTTTTTTTAC ATCCGGATTCGGACA TERM 5540 4095716 - 4095730 + F 100 -7.1 -5.47218 | opp_overlap 4095707 4095716 TGAAGAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACATCCGG TERM 5541 4095730 - 4095716 - f 100 -7.1 -5.63374 | opp_overlap 4095716, overlap 4095707 TGAAGAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACATCCGG TERM 5542 4095969 - 4095938 - f 71 -9.7 -3.0464 | gap 1, opp_overlap 4095946, overlap 4095897 4095946 AACTCAGGCTGAAGA GTAAAAAA-CCGAC GCAAA GTCGGTTTTTTTAC GTCCTGATTCAGACC TERM 5543 4095960 - 4095946 - f 91 -7.1 -5.27779 | opp_overlap 4095946, overlap 4095938 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG TERM 5544 4095946 - 4095960 + F 100 -7.1 -5.48825 | opp_overlap 4095946 4095938 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACGTCCTG arsR 4096120 - 4096473 + | DNA-binding transcriptional repressor TERM 5545 4096585 - 4096603 + G 74 -6 -4.57837 | overlap 4096587 TCTGTGGTTCTGATG TTGATCAG GTG CTGGTCGA TTTTTCCGCAGATGT arsD 4096521 - 4096883 + | Arsenical resistance operon trans-acting repressor TERM 5546 4097308 - 4097318 + G 70 -4 -4.72272 | TCTGCTGGCCCGCTT TGAT CAC ATCA TTTTTGATACCGCGC TERM 5547 4097462 - 4097444 - g 74 -6 -4.56597 | GCTGGGCTGGAAAAA CAGCGT GAGCAGT ACGCTG ATGCGGTAGAAGCAT arsA 4096877 - 4098652 + | Arsenical pump-driving ATPase TERM 5548 4098680 - 4098664 - f 87 -13.7 -2.88579 | opp_overlap 4098653 4098676 TTAATTTTTTATACA GGGCGAC CAT GTCGCCC TGTCAGGAGGGTGTA TERM 5549 4098702 - 4098713 + G 71 -2.2 -4.91109 | GAGGGTGTATGTTAC TGGC AGGC GCTA TTTTTGTCCTGACCA TERM 5550 4098901 - 4098916 + G 90 -6.8 -5.08824 | TATCATCAGCCTGCT GCTGGA TGAG TCCGGC TTTTTTGAATGGGCG TERM 5551 4099270 - 4099280 + G 70 -5.4 -4.41348 | overlap 4099257 TGTTGCCACGCTGGT GATG TTG CATC TTTATTTCCGCAAAG TERM 5552 4099652 - 4099639 - g 81 -9.5 -4.07568 | CGTGCTGGCGGAAAA CGGCC TGTG GGCCG CGACGCTCGGCACCG arsB 4098695 - 4099984 + | arsenite/antimonite transporter arsC 4099997 - 4100422 + | arsenate reductase ECUMN_3994 4100852 - 4100556 - | hypothetical protein ECUMN_3995 4100948 - 4101961 + | hypothetical protein TERM 5553 4102126 - 4102159 + F 71 -8.3 -3.49486 | gap 1, opp_overlap 4102125 4102128, overlap 4102128 4102137 CAATCACCACGCAAT CAT-GCTTCTCTGACA TTT TATCGGAGAAGCAATG TCTCTTTGTTTCAGT TERM 5554 4102128 - 4102156 + F 74 -11.1 -2.57313 | opp_overlap 4102125 4102128, overlap 4102126 4102137 ATCACCACGCAATCA TGCTTCTCTGACA TTT TATCGGAGAAGCA ATGTCTCTTTGTTTC TERM 5555 4102156 - 4102128 - f 74 -11.1 -2.76442 | opp_overlap 4102128 4102126 4102137, overlap 4102125 ATCACCACGCAATCA TGCTTCTCTGACA TTT TATCGGAGAAGCA ATGTCTCTTTGTTTC TERM 5556 4103227 - 4103237 + G 78 -5.4 -4.87133 | overlap 4103215 CCGGGTTCGTTCTAA CCTT GTC AAGG TTTTATTTCGAAGAT TERM 5557 4103591 - 4103566 - g 71 -2.7 -4.84311 | CCCGATACAATAAAA TTCAAACAT GGGCAGAA ATGTCTGAA TATCAATTCGTAGTA ECUMN_3996 4102542 - 4103765 + | hypothetical protein slp 4104010 - 4104576 + | outer membrane lipoprotein TERM 5558 4104587 - 4104617 + F 81 -12.7 -2.55015 | opp_overlap 4104590, overlap 4104583 AATAACACCACCGAG AGATGCAGATGCT TTCTC AGCATCTGCATCA TGCATTACATCAAAT TERM 5559 4104614 - 4104590 - f 86 -13 -2.93207 | opp_overlap 4104587 4104583 AACACCACCGAGAGA TGCAGATGCT TTCTC AGCATCTGCA TCATGCATTACATCA yhiF 4104729 - 4105259 + | putative DNA-binding transcriptional regulator TERM 5560 4105305 - 4105278 - T 70 -6.2 -4.24075 | ATTGATTAATATAAA GAGGCCCAGCAA TAAA TAGCCAGACCTC CCGTTAATTATACGT chuS 4106348 - 4105320 - | Heme oxygenase TERM 5561 4105994 - 4106004 + g 80 -5.4 -4.97158 | overlap 4105989 TACTCTGGCGTTCGC TACG AGT CGTA TTTTCTTTAATGTGA TERM 5562 4106391 - 4106372 - R 100 -13.6 -4.03234 | opp_overlap 4106370 TTCCTTCCAGATAAA TGCCCCGA AATA TCGGGGCA GATGATTACCATTGA chuA 4108379 - 4106397 - | outer membrane hemin receptor chuT 4108985 - 4109977 + | putative periplasmic binding protein ECUMN_4003 4109997 - 4111334 + | putative oxygen independent coproporphyrinogen III oxidase (chuW-like) ECUMN_4004 4111347 - 4111841 + | conserved hypothetical protein (chuX protein) TERM 5563 4112167 - 4112182 + G 75 -4.6 -4.82901 | GACCTCTTTGGGATG CGGCGA TAGC TGGCCG TTTTTATCGGAGCGG TERM 5564 4112263 - 4112247 - g 78 -10.9 -3.5394 | opp_overlap 4112247, overlap 4112236 AAACGCTGGCGGAAA GCTGGTT GCA AACCAGC CAGCTTGATTACGCC ECUMN_4005 4111841 - 4112464 + | conserved hypothetical protein (chuY) TERM 5565 4112470 - 4112490 + F 100 -18.3 -2.66316 | opp_overlap 4112456 4112457, overlap 4112467 4112455 ACCGGCGTGATACCC CGGCGCGGA ATC TCCGCGCCG TAATGTCGTAACGGA chuU 4112513 - 4113505 + | putative hemin transport system permease chuV 4113349 - 4114272 + | putative hemin ABC-type transport system ATP-binding protein TERM 5566 4114306 - 4114275 - T 87 -10.3 -4.30576 | gap 1, opp_overlap 4114284, overlap 4114279 CCTCGATCATTAAAA CCAACAGGAGTACC GCTCT GGTACTCCTGT-GA ATAAATAACTATACA TERM 5567 4114303 - 4114279 - T 100 -14.4 -3.72743 | opp_overlap 4114284, overlap 4114275 GATCATTAAAACCAA CAGGAGTACC GCTCT GGTACTCCTG TGAATAAATAACTAT yhiD 4114971 - 4114324 - | putative Mg(2+) transport ATPase inner membrane protein TERM 5568 4114987 - 4115017 + r 100 -12.6 -4.93968 | opp_overlap 4114987 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT TERM 5569 4115017 - 4114987 - R 100 -14.8 -4.93595 | opp_overlap 4114987 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT hdeB 4115361 - 4115035 - | acid-resistance protein TERM 5570 4115440 - 4115393 - R 76 -10.8 -3.00259 | gap 1, opp_overlap 4115397, overlap 4115397 TATAGAGATTATATA TGAACAGG-AGGAATAGCTGCTT TTA AAGAAGATATTCCGGCCTGTTCA ATATGCAAGGAAGTA hdeA 4115809 - 4115477 - | stress response protein acid-resistance protein TERM 5571 4115659 - 4115646 - G 72 -6.7 -4.25283 | AGCGCTTCAGCAAAA CCAAC TGCA GTTGG CTGGAAGGATTCGTC hdeD 4116064 - 4116636 + | acid-resistance membrane protein TERM 5572 4116653 - 4116687 + F 100 -15.9 -3.26545 | opp_overlap 4116663, overlap 4116654 TATCCCAGTTGTCAC CCGGATCATAGTCAC TTGAT GTGACTATGATCCGA TTAATACTCTCTCCG TERM 5573 4116654 - 4116686 + F 100 -19.4 -2.55606 | opp_overlap 4116663, overlap 4116653 ATCCCAGTTGTCACC CGGATCATAGTCAC TTGAT GTGACTATGATCCG ATTAATACTCTCTCC TERM 5574 4117080 - 4117060 - f 100 -14.1 -4.65263 | opp_overlap 4117060 ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC TTAAGTCGAAACAAG TERM 5575 4117060 - 4117080 + F 89 -14.1 -3.05384 | opp_overlap 4117060 ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC TTAAGTCGAAACAAG gadE 4117433 - 4117960 + | DNA-binding transcriptional activator TERM 5576 4118123 - 4118141 + F 100 -3.1 -6.02345 | overlap 4118100 AATGCTGGCAGGAAC TGTTGGC AGAAC GGCAACA TTTTTTTTGTCGTTG TERM 5577 4118652 - 4118614 - g 71 -9.6 -3.55622 | gap 1 CTGAACTCCGCCAAA GGCAC-GCTGGCGAAAG CGCTCT CTACCGCCAGCAATGCC CGCATCACCTTTAAC mdtE 4118299 - 4119456 + | multidrug resistance efflux transporter TERM 5578 4122363 - 4122350 - g 70 -5.2 -4.40311 | AGAAAGAAGGGAAAA CGCC GATAGA GGCG ATCATCGAAGCGGCG mdtF 4119481 - 4122594 + | multidrug transporter, RpoS-dependent TERM 5579 4122639 - 4122606 - T 82 -12.6 -2.92667 | opp_overlap 4122606, overlap 4122603 4122608 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAGG GTTCAGCCTTACTC TTTCCTGCCAACCAT TERM 5580 4122606 - 4122639 + T 100 -14.8 -3.72695 | opp_overlap 4122606 4122603 4122608 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAGG GTTCAGCCTTACTC TTTCCTGCCAACCAT TERM 5581 4122637 - 4122608 - T 71 -9.4 -3.01269 | opp_overlap 4122606, overlap 4122606 4122603 AACGTGTAAATGAGA GTAAGGTTGAAC GTGAGG GTTCAGCCTTAC TCTTTCCTGCCAACC TERM 5582 4122885 - 4122872 - T 71 -9.5 -2.99057 | overlap 4122869 TGCGAAAGAGAACTA GCCGG TAGC CCGGC AGAAATCATCAGGGA gadW 4123685 - 4122957 - | DNA-binding transcriptional activator TERM 5583 4123601 - 4123618 + g 82 -2.7 -5.28683 | overlap 4123603 CCAGTAACAGGATAC TCTCGTT GTGC AACGATA TTTTTTGCTGTTCAT TERM 5584 4124011 - 4124029 + r 100 -5.2 -6.06529 | GCAGACTATCCTCTT CCCGGT CCCCTAT GCCGGG TTTTTTTTATGTCTG gadX 4124878 - 4124054 - | DNA-binding transcriptional dual regulator TERM 5585 4125222 - 4125177 - R 80 -10.5 -3.72324 | opp_overlap 4125181, overlap 4125181 TATTGCGATTAATAA GCAACCGAATGCCCAACTGTT TTTT AAAGGTTGGGCATTCGGTTTT TACAACGTTATGTTA TERM 5586 4125218 - 4125181 - R 100 -15.7 -3.56142 | opp_overlap 4125181, overlap 4125177 GCGATTAATAAGCAA CCGAATGCCCAACTGTT TTTT AAAGGTTGGGCATTCGG TTTTTACAACGTTAT TERM 5587 4125181 - 4125218 + r 100 -17.9 -4.60255 | opp_overlap 4125181 4125177 GCGATTAATAAGCAA CCGAATGCCCAACTGTT TTTT AAAGGTTGGGCATTCGG TTTTTACAACGTTAT gadA 4126638 - 4125238 - | glutamate decarboxylase A, PLP-dependent TERM 5588 4126814 - 4126839 + r 83 -11.9 -3.26428 | opp_overlap 4126814, overlap 4126809 TTATCGTAATGAAAA TCGCCCAAACA TTCC TGTTCGGGCGA TTAAATTAATTATTG TERM 5589 4126839 - 4126814 - R 100 -14.1 -4.42238 | opp_overlap 4126814 4126809 TTATCGTAATGAAAA TCGCCCAAACA TTCC TGTTCGGGCGA TTAAATTAATTATTG yhjA 4128246 - 4126849 - | cytochrome C peroxidase (cpp-like) TERM 5590 4127368 - 4127391 + g 70 -3.8 -4.62471 | gap 1, overlap 4127371 CGGATAGACTTCGAG GAACTGC-GCT TTA AGCTGCGGATC TTTTTCCAGCTTAGC TERM 5591 4129855 - 4129844 - g 72 -5.8 -4.30576 | CTGGGATGATGAAAA CGGT ATCT ACCG CGATTACGACTGGCG TERM 5592 4130258 - 4130272 + G 74 -7.8 -4.06001 | opp_overlap 4130258, overlap 4130260 4130263 GTTTGGCTGGACTAA CGGTGT GGT ACGCCG TTTAATTGGTTTGTA treF 4128651 - 4130300 + | cytoplasmic trehalase TERM 5593 4130344 - 4130301 - T 85 -11.2 -3.51329 | opp_overlap 4130304 4130343, overlap 4130304 TACGGCGAACCATAA TATTTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAATTA TCCTCTTCAGGAGGA TERM 5594 4130341 - 4130304 - T 84 -12.9 -2.59447 | opp_overlap 4130304, overlap 4130301 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA TERM 5595 4130304 - 4130341 + T 100 -12.9 -3.52073 | opp_overlap 4130304 4130301 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA yhjB 4130953 - 4130351 - | putative DNA-binding response regulator in two-component regulatory system TERM 5596 4131509 - 4131543 + G 91 -9.2 -4.62772 | opp_overlap 4131509 4131510, overlap 4131510 4131511 CAGTTGTTCATCAAA GTCGCTGAGCTGGAAA GTT TTTCCCGCGCAGCGGA TTTCTTTGCTTTGCC TERM 5597 4131542 - 4131510 - g 70 -10.5 -2.83522 | opp_overlap 4131509 4131510 4131511, overlap 4131509 AGTTGTTCATCAAAG TCGCTGAGCTGGAAA GTT TTTCCCGCGCAGCGG ATTTCTTTGCTTTGC TERM 5598 4131510 - 4131542 + G 83 -12.7 -3.36578 | opp_overlap 4131510 4131509, overlap 4131509 4131511 AGTTGTTCATCAAAG TCGCTGAGCTGGAAA GTT TTTCCCGCGCAGCGG ATTTCTTTGCTTTGC TERM 5599 4131511 - 4131541 + G 84 -14 -2.60863 | opp_overlap 4131510 4131509, overlap 4131510 4131509 GTTGTTCATCAAAGT CGCTGAGCTGGAAA GTT TTTCCCGCGCAGCG GATTTCTTTGCTTTG yhjC 4131401 - 4132372 + | putative DNA-binding transcriptional regulator yhjD 4132421 - 4133434 + | conserved hypothetical protein; putative inner membrane protein TERM 5600 4133907 - 4133927 + G 100 -9.7 -4.7416 | GTCCTTGTCGCCTCT CTCATTGGC ACG GCCATTGAG TTTTTCGACTTTTAC TERM 5601 4134062 - 4134072 + G 75 -4.6 -4.86773 | CGTCGCGCGCCCCAT TGGC TCT GCCG TTTTTGGTCATTTTG TERM 5602 4134417 - 4134428 + G 70 -5.8 -4.27117 | TTTATGAGCTGGGGC TGGC GTGT GCCA TTTATCTTCTCAGCG TERM 5603 4134540 - 4134524 - g 71 -2.9 -4.81249 | overlap 4134535 CGCTAAAGCGAAAAA GCAGG TGAAGAT CCCGC TGGGTACGCTGCTGA TERM 5604 4134804 - 4134784 - g 77 -8.3 -4.07568 | TTGGTCGCCGTAAAA GCATGGTAA TCA TCACCACGC TGATCATCCTGTTCG yhjE 4133826 - 4135148 + | putative transporter TERM 5605 4135185 - 4135161 - T 84 -8.5 -4.32048 | opp_overlap 4135160 TAATAAGAGTGAAAA GCCTGATGCGC TAC GCTTATCAGGC CTGAATTTCCATACA TERM 5606 4135330 - 4135291 - T 71 -10.2 -2.7976 | gap 1, opp_overlap 4135291 4135299, overlap 4135290 GCCAACACTCTAAAT CTGTTTAATTGCCGGATGT CAG ACATCCGGCAATTAT-CAT CACTTCTTCATCTGC TERM 5607 4135299 - 4135323 + T 100 -17.3 -3.45434 | opp_overlap 4135291 4135290, overlap 4135291 TCTAAATCTGTTTAA TTGCCGGATGT CAG ACATCCGGCAA TTATCATCACTTCTT yhjG 4137405 - 4135330 - | putative outer membrane biogenesis protein TERM 5608 4136193 - 4136216 + g 77 -3 -5.06103 | opp_overlap 4136189 4136193 AGCGGTCATAAGGCA GCACTTTGCC CGCA GGCTGAATGC TTTTTTCACCCTTCT TERM 5609 4137330 - 4137308 - G 72 -7 -4.1899 | overlap 4137321 CGATTCCAGTCAAAA GTTGCAATCA AAA TGATCGCCAC GACAATCAACAACAA yhjH 4138227 - 4137460 - | EAL domain containing protein involved in flagellar function ECUMN_4027 4138196 - 4138375 + | hypothetical protein TERM 5610 4139237 - 4139224 - g 82 -3.1 -5.27335 | CTGCCGAAAGAAAAA GTGAT CGAT ACCAC CGCAGCTGGCGACTC kdgK 4138459 - 4139388 + | ketodeoxygluconokinase ECUMN_4029 4139944 - 4139360 - | hypothetical protein; putative exported protein TERM 5611 4139399 - 4139426 + g 81 -12.8 -3.18681 | AATAATGGTTTTTGA CGGAGAACGGGT AGAT ATTCGTTCTCCG TTAATCGCCTTGCAG ECUMN_4030 4140326 - 4140006 - | hypothetical protein ECUMN_4031 4140809 - 4140330 - | hypothetical protein ECUMN_4033 4141612 - 4141163 - | hypothetical protein TERM 5612 4141752 - 4141787 + r 93 -11.3 -4.29106 | gap 1, overlap 4141756 CTAATTTATTACCGT TAATCCCGGCAGCG CAGAAGAAA CGCTGCCGGG-TTA TTTATTACTGTGCGG TERM 5613 4141756 - 4141784 + r 100 -14.6 -4.2602 | overlap 4141752 TTTATTACCGTTAAT CCCGGCAGCG CAGAAGAAA CGCTGCCGGG TTATTTATTACTGTG yhjJ 4143288 - 4141792 - | putative zinc-dependent peptidase TERM 5614 4143341 - 4143324 - R 91 -6.9 -5.4505 | CCTGGTAATAAAAAA CTGCCCG TTGT CGGTCAG TCTAAATGACGTTAA TERM 5615 4143442 - 4143414 - R 100 -14 -4.52669 | opp_overlap 4143421 AAGAAGTGAAATAAA CCTGAACTCACC CAGGT GGTAAGTTCAGG CACAGGGGTCAATTA TERM 5616 4143495 - 4143466 - R 75 -9.3 -3.59315 | overlap 4143468 TCAATTATGCGCAAA CACCCGCACTC GGGGAAGG GAGTGCGGGCA TAAGTGGTGAGATTA TERM 5617 4143493 - 4143468 - R 85 -11.9 -3.37259 | overlap 4143466 AATTATGCGCAAACA CCCGCACTC GGGGAAGG GAGTGCGGG CATAAGTGGTGAGAT dctA 4144794 - 4143508 - | C4-dicarboxylic acid, orotate and citrate transporter TERM 5618 4144572 - 4144560 - G 74 -7.7 -4.08317 | opp_overlap 4144571 CAATTTCAAAGTAAA GCAGT GCG ACTGC GCCGGTACGACCGAC TERM 5619 4144939 - 4144918 - R 73 -4.4 -4.7657 | opp_overlap 4144922 4144924 CAAAAAGGTTAAAAA GTTTGAGC TGGCTC GCACAAAC CAGCACTTTTTAAAG yhjK 4146926 - 4144977 - | putative diguanylate cyclase TERM 5620 4148299 - 4148315 + r 78 -8.7 -4.02132 | GTCGTGGTCACACCG GATGCGA CCA TCGCGTC TTTGTAGGTTTCCAG TERM 5621 4148492 - 4148517 + r 77 -8.9 -3.71848 | overlap 4148483 CCTGTGCCAGCGCCA CGCGCCGCTGA GTGT TCAGCGAGGCG TTATTGGTGGCAGGC TERM 5622 4149191 - 4149212 + r 73 -4.4 -4.8543 | gap 1, opp_overlap 4149168 4149191 GCTGACTGGCAGAGA GC-GAGGCG ATAAA CGCTTCAGC TTTTTCTGGCGATTG TERM 5623 4149561 - 4149572 + r 70 -7.2 -3.87815 | ATTCGCCACCGCATT GGCG CGAT CGCC TTTCTGAGAATACGC bcsZ 4151608 - 4150502 - | endo-1,4-D-glucanase TERM 5624 4150667 - 4150679 + g 75 -6.9 -4.36914 | opp_overlap 4150641, overlap 4150644 4150648 CTGGCGCTGAACGGC CTGCG CAT CGCGG TTTTGTAAAAAGGGC TERM 5625 4150763 - 4150775 + g 71 -2.6 -4.88067 | CACATCCACTTTTTC TGGC GGATA GCCG TTTTTCTCGGTGAAT TERM 5626 4150880 - 4150870 - G 72 -8.2 -3.71873 | CTACCCACATGTAAA CGCG GAT CGCG TCGTAGCTGCTGATC bcsB 4153954 - 4151615 - | regulator of cellulose synthase, cyclic di-GMP binding TERM 5627 4152596 - 4152616 + g 84 -11.1 -3.79519 | opp_overlap 4152583 TACCGGAATCCGCAG CAGCAGGCG ATT CGCCTCCTG TTTGCTGCTCAGGTT TERM 5628 4156364 - 4156346 - R 70 -10.2 -2.64765 | overlap 4156342 GAATGAGATAACGGA CCGGGTCC AGC GGACGCGG ACGCGAGGCGTTGAT TERM 5629 4156487 - 4156470 - R 81 -6.3 -4.90869 | gap 1, overlap 4156472 4156473 AGGATCAACCAAAAA CAGC-CGA GCG TCGCGCTG AAAGCCGACGCGCCG ECUMN_4043 4157331 - 4156579 - | hypothetical protein TERM 5630 4156799 - 4156819 + g 70 -9.7 -3.16191 | ATATCGTCCTGAACT TGACTGCCG ATA CGGAAGTCA TTAATCAAAATATGC yhjR 4157531 - 4157343 - | hypothetical protein bcsE 4157803 - 4159374 + | putative protease involved in cellulose biosynthesis bcsF 4159371 - 4159562 + | hypothetical protein TERM 5631 4160109 - 4160093 - g 76 -12.3 -2.52543 | opp_overlap 4160105 ACGGGTGGTAACGCA GCGGCAA CCG TTGCCGC GACGGGTGGCGCACC TERM 5632 4160536 - 4160550 + G 74 -2.7 -5.00884 | opp_overlap 4160536 GATGATGGGACATAA CGGCC AGTTC GGCGG TTTTTTGAAAGAAGT TERM 5633 4161070 - 4161083 + G 70 -5.3 -4.36914 | TCTGGTGGTTCGCGT TCTTG ATGG CAAGA TTTTCTCCGAAGACA bcsG 4159559 - 4161238 + | putative endoglucanase involved in cellulose biosynthesis TERM 5634 4161274 - 4161249 - T 100 -14 -5.03201 | AATAAGAACGAAAAA GGCCGCAGAG TTTCAC CCCTGCGGCC TGATCCGGGCGCAAA TERM 5635 4161499 - 4161540 + T 100 -13.2 -4.60797 | gap 2, opp_overlap 4161498 TGGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 5636 4161703 - 4161715 + T 76 -4.1 -5.06414 | overlap 4161698 4161708 AGAATATTATCCGCT TGCAG CCG TTGCA TTTTTCTTACGAAAA TERM 5637 4161757 - 4161732 - T 100 -14 -4.72272 | opp_overlap 4161708 TTTTCTTACGAAAAA GGCCGCAGAG TTTTAT CCCTGCGGCC TGATCCGGGCGCAAA TERM 5638 4161982 - 4162023 + T 100 -13.2 -4.60797 | gap 2, overlap 4161946 TAGGTTCAAGAATGG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC ECUMN_4048 4162241 - 4162080 - | hypothetical protein yhjV 4162391 - 4163662 + | transporter TERM 5639 4163682 - 4163664 - T 79 -9.5 -3.76402 | opp_overlap 4163664 AGCTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGTGAGTTACCG TERM 5640 4163664 - 4163682 + T 80 -7.3 -4.4715 | opp_overlap 4163664 AGCTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGTGAGTTACCG dppF 4164696 - 4163692 - | dipeptide transporter ; ATP-binding component of ABC superfamily TERM 5641 4163780 - 4163732 - G 78 -7.4 -4.32583 | gap 2, overlap 4163729 4163736 TCAACAGCAAAACAA GCTACCAGTTGACCGCCGTAGTCT TTT AG-CTGCGGCTG-CAACTGGGTGC AGGGGCCGAAGCGCC dppD 4165676 - 4164693 - | dipeptide transporter ; ATP-binding component of ABC superfamily TERM 5642 4165577 - 4165626 + g 70 -10.7 -2.83403 | gap 1, overlap 4165576 4165619 CAATCCCGACCACTT CGCCCTGTTTTACGCTGTAG-CTG ATG CGGTCTACGGCGCGGAACGGTGCG CTTTCGTCGCCGAAA dppC 4166589 - 4165687 - | dipeptide transporter ; membrane component of ABC superfamily dppB 4167618 - 4166599 - | dipeptide transporter; membrane component of ABC superfamily TERM 5643 4167708 - 4167678 - g 74 -8.2 -3.86897 | overlap 4167682 TGTATTGCTCACAAA TCAATTCCCGCCCA GGT CGGGCAGGGAATGA AGTATTGCTGCCGGA TERM 5644 4167705 - 4167682 - g 73 -9.6 -3.6053 | gap 1, overlap 4167678 TTGCTCACAAATCAA TTCCC-GCCCA GGT CGGGCAGGGAA TGAAGTATTGCTGCC ECUMN_4054 4167636 - 4167779 + | hypothetical protein dppA 4169376 - 4167769 - | dipeptide transporter ; periplasmic-binding component of ABC superfamily TERM 5645 4168520 - 4168536 + g 81 -9.5 -4.02424 | TTAAGCCCCGGCATT TCCATCA GAT TGATGGA TTTATCCTGCTTCAT TERM 5646 4170049 - 4170104 + r 77 -3.2 -5.22104 | gap 1, opp_overlap 4170049, overlap 4170049 4170050 4170052 GACAGTTTCAGTTAA C-CGGCTTTTTGATACTCAGTCCGGTA TTC TACCGGGCTGAGTCCCCCAAGACTGAG TTTTATTCTTTTTTG ECUMN_4056 4170767 - 4170045 - | transposase ORF B, IS3 family, IS150 group TERM 5647 4170591 - 4170603 + g 73 -9.1 -3.6761 | overlap 4170589 GAGTCCCATATTTCC CCGGT AAG ACCGG TATTTCTTCAGGCGC ECUMN_4057 4171402 - 4170872 - | transposase ORF A, IS1397 TERM 5648 4170904 - 4170914 + g 82 -2.4 -5.40072 | overlap 4170899 TTCGTTTTTTCTCCA GCTC CTG GCGC TTTTTTTCCAGGAGA TERM 5649 4171527 - 4171547 + r 85 -11.1 -3.73107 | opp_overlap 4171528, overlap 4171519 4171528 CTACAAATGCAAAAA AGCCTGCTC GCT GAGCAGGCA TTTCGAATTTGGTCG TERM 5650 4171528 - 4171546 + r 89 -14.6 -2.83382 | opp_overlap 4171528, overlap 4171527 4171519 TACAAATGCAAAAAA GCCTGCTC GCT GAGCAGGC ATTTCGAATTTGGTC TERM 5651 4171546 - 4171528 - R 100 -14.6 -5.24449 | opp_overlap 4171528 4171527 4171519 TACAAATGCAAAAAA GCCTGCTC GCT GAGCAGGC ATTTCGAATTTGGTC eptB 4173416 - 4171725 - | putative metal dependent hydrolase TERM 5652 4173655 - 4173638 - R 100 -12.7 -4.88129 | opp_overlap 4173636 4173635 AAAAAGCAGTAAAAA GGGCCAG TTAA CTGGCCC AAATTTTACGCGTCA yhjX 4174948 - 4173740 - | putative transporter TERM 5653 4175042 - 4175028 - R 76 -6.4 -4.56775 | overlap 4175029 ATGCCTGGGGAAAAA CGGCAT GAA ATGCCA TCAGAACGGAATGAA yhjY 4175875 - 4175177 - | hypothetical protein TERM 5654 4175467 - 4175437 - G 79 -12.6 -3.06133 | overlap 4175439 4175454 CAAGCCGGGAGTCAA CACGCCAGCCTAAG GTA CTCACGCTGGCATG CCATAACGGATCGGC TERM 5655 4176204 - 4176189 - g 83 -6.1 -5.00884 | ACCGTCCTCAAAAAA CGCGA AAACTA TCGCG CCAGCTTTCATCAGT tag 4176033 - 4176596 + | 3-methyl-adenine DNA glycosylase I, constitutive TERM 5656 4176846 - 4176888 + G 70 -10.5 -2.82635 | CCGTCAGACGCGGTA TTGGTAAGGCGCTGATGCA GTATG TGCAGCAGCGCCATCCCCA TCTGATGCTGGAGGT yiaC 4176593 - 4177033 + | putative acyltransferase with acyl-CoA N-acyltransferase domain bisC 4179281 - 4177002 - | biotin sulfoxide reductase TERM 5657 4177096 - 4177118 + g 73 -11.3 -2.66695 | overlap 4177095 4177094 TTACCCGCACAGCCA TTCCCCAGC CGCGA GCTGGGGAG ATCTTTGGTCAGAAC TERM 5658 4177540 - 4177552 + g 71 -3.3 -4.7497 | opp_overlap 4177519, overlap 4177541 GAGAAGATTTCAATC TTGCC GCT GGCGG TTTTTAATGGATGCG TERM 5659 4178447 - 4178461 + g 78 -8.5 -4.28656 | CCCCACAAATCCCTG CCGCC CATTC GGCGG TTTTGGCTATTCCGT TERM 5660 4178656 - 4178685 + g 72 -4.3 -4.61231 | gap 1, overlap 4178657 AAGAACTCAACGGTT TCCGATC-GCATTG GAT CAATGCAGATCAGC TTTTTCCCGCTGTCA TERM 5661 4179103 - 4179119 + g 77 -5.8 -4.62069 | ACAAATTCATCCTGC CCGCGA ATGCC TTGCGG TTTTTCCGGTGACGC TERM 5662 4179462 - 4179435 - H 71 -9.2 -3.30124 | gap 1 GTTCACGCGGCATAA TCTCCCGCCACGG AAC CCGTGGCAA-AGA ATAAAAAGGTTATTA yiaD 4179488 - 4180147 + | putative outer membrane lipoprotien TERM 5663 4180157 - 4180184 + F 100 -14.3 -3.82481 | CTGTAATCCCTTTCA TGCCAGGTGAT GCAGAA ATCACCTGGCA TTCTTCAGTTTTCCT TERM 5664 4180385 - 4180367 - g 70 -3.8 -4.69656 | overlap 4180369 4180371 AACCATCGAACAAAA TGCAGCAA TTT TTGCCGAA GCTGAAGGTTTACTG tiaE 4180251 - 4181225 + | 2-oxo-carboxylic acid reductase (glyoxalate reductase) (2-ketoaldonate reductase) TERM 5665 4181241 - 4181207 - T 78 -10 -3.59247 | gap 1, opp_overlap 4181240 GAAGAACTGTGTAAA TCCGCAC-GTCGCGG ACTAAG CCGCGACTGCGTGGA GTAAAGCCCGATAAT TERM 5666 4181240 - 4181273 + T 85 -10.5 -4.2528 | gap 1, opp_overlap 4181207 4181247, overlap 4181247 AGCCGCGACTGCGTG GAGTAA-AGCCCGA TAATCGC TCGGGCTTTTACTC TTTATTGGGTTGCAG TERM 5667 4181247 - 4181265 + T 80 -7.4 -4.55446 | opp_overlap 4181247, overlap 4181240 ACTGCGTGGAGTAAA GCCCGA TAATCGC TCGGGC TTTTACTCTTTATTG yiaF 4181985 - 4181275 - | hypothetical protein yiaG 4182419 - 4182709 + | putative transcriptional regulator TERM 5668 4182736 - 4182755 + F 100 -13.6 -4.08692 | CTTTATTGCTGTTTA CGGTCCTG ATGA CAGGACCG TTTTCCAACCGATTA cspA 4182990 - 4183202 + | major cold shock protein TERM 5669 4183250 - 4183231 - T 70 -9.2 -3.19511 | opp_overlap 4183231, overlap 4183221 4183216 4183229 GCACAGAATCTAAGA TCCCTGCC ATTT GGCGGGGA TTTTTTTATTTGTTT TERM 5670 4183231 - 4183250 + T 100 -11.4 -6.11392 | opp_overlap 4183221 4183216 4183231 4183229 GCACAGAATCTAAGA TCCCTGCC ATTT GGCGGGGA TTTTTTTATTTGTTT TERM 5671 4183381 - 4183362 - T 100 -13.6 -4.20749 | opp_overlap 4183378 CAACACCGTAAGAAA GGCGGGAA TAAT TTCCCGCC GAAGACGCTTACTCT TERM 5672 4183609 - 4183638 + T 78 -6.5 -4.64844 | gap 1 TCTATGCATAGAGGG GCCTCACTTTGATT TAT AGTCAG-GTGGGGC TTTTCTCTGTCTGCC TERM 5673 4183770 - 4183748 - T 86 -3.5 -5.48303 | ATAATCCTAAAAAAA TCTCATAAA ATTAA TATATGAGA CAATCTTTATTCAGC TERM 5674 4183845 - 4183828 - T 100 -12.7 -5.28176 | opp_overlap 4183828 TTTAGCGATAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAATGGCG TERM 5675 4183828 - 4183845 + T 100 -12.7 -4.77036 | opp_overlap 4183828 TTTAGCGATAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAATGGCG glyS 4185933 - 4183864 - | glycine tRNA synthetase, beta subunit TERM 5676 4185374 - 4185364 - G 72 -8.2 -3.85698 | CGGCTCGCCCATAAA GCGG TGG CCGC GAATCACGCGATCGG glyQ 4186854 - 4185943 - | glycine tRNA synthetase, alpha subunit TERM 5677 4186149 - 4186167 + g 70 -6.7 -4.12254 | gap 1 GCAGCGGATTTTCCA GCGCCAGC AGCT GCTG-CGC TTCTTTCTCGTACTG ysaB 4187257 - 4186949 - | hypothetical protein TERM 5678 4187587 - 4187599 + G 71 -3.3 -4.84363 | TTCTGCCTCTCGTGT CAGCG TGC CGCTA TTTTTCATGATTTCC yiaH 4187432 - 4188427 + | conserved hypothetical protein; putative inner membrane protein TERM 5679 4188459 - 4188434 - T 100 -11.9 -4.90778 | opp_overlap 4188425 4188434 GTGAGTTAAATAAAA GCCCGGTCA CATTGGAC TGACCGGGC TTATGTGAATTATTC TERM 5680 4188434 - 4188459 + T 89 -11.9 -3.57629 | opp_overlap 4188434, overlap 4188425 GTGAGTTAAATAAAA GCCCGGTCA CATTGGAC TGACCGGGC TTATGTGAATTATTC yiaA 4188906 - 4188469 - | conserved hypothetical protein; putative inner membrane protein yiaB 4189292 - 4188951 - | conserved hypothetical protein; putative inner membrane protein TERM 5681 4189017 - 4188999 - G 82 -2.4 -5.42131 | CAAGCAGACAAAAAA GGCGAT GGGGTAG ATCACC ATTTCATAAGCATTG xylB 4190915 - 4189461 - | xylulokinase TERM 5682 4189889 - 4189874 - G 77 -3.2 -5.04868 | opp_overlap 4189875, overlap 4189875 TCAAACCAAAGAAAA CCCC CTTCGCCT GGGG ATTATTGTGTGGTGT TERM 5683 4190965 - 4190937 - R 100 -9.6 -5.40072 | gap 1, opp_overlap 4190962, overlap 4190938 CGTTCCTTAAAAAAA TGCCCGG-TATCG CTAC CGATAACCGGGCC AACGGACTGCACAGT TERM 5684 4190964 - 4190938 - R 100 -13.1 -3.83561 | gap 1, opp_overlap 4190962, overlap 4190937 GTTCCTTAAAAAAAT GCCCGG-TATCG CTAC CGATAACCGGGC CAACGGACTGCACAG TERM 5685 4190984 - 4191008 + r 72 -8.7 -3.60818 | overlap 4190962 GGACTGCACAGTTAG CCGTTATTTGT CGA ACAGATAATGG TTTACCAGATTTTCC xylA 4192309 - 4190987 - | D-xylose isomerase xylF 4192675 - 4193667 + | D-xylose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5686 4193671 - 4193699 + F 100 -12.4 -4.0641 | opp_overlap 4193658 AGCGAGCTGTAAGCG TTACGCCCCGGC GAGGA GCGGGGGCGTGA TTTCTCTCCATGCCG TERM 5687 4194994 - 4194984 - g 85 -6.8 -4.81083 | overlap 4194977 4194985 GGTAATCAGCAAAAA GCGA TCC TCGC TCGCTGCCTGTTACT xylG 4193745 - 4195286 + | fused D-xylose transporter subunits of ABC superfamily: ATP-binding components xylH 4195264 - 4196445 + | D-xylose transporter subunit ; membrane component of ABC superfamily TERM 5688 4196462 - 4196493 + GF 100 -16.8 -4.7078 | opp_overlap 4196468 4196469 TTTGATAAAAATTTT CTCAAAGCCGGTAA CGTA TTACCGGTTTTGAG TTTTTGCATGATTCA ECUMN_4080 4196357 - 4196533 + | hypothetical protein TERM 5689 4196834 - 4196852 + G 81 -6 -4.81249 | opp_overlap 4196834 4196849 TGCCACCGATAACTA TGCGCT GGTTGAA AGCGCA TTTTTGCATTTAAAA TERM 5690 4196870 - 4196890 + G 74 -3.2 -4.98436 | TTTGCATTTAAAAGA GAAAGGCG TTAAC CGCTTTGC TTTTTATGGTCTTCC xylR 4196523 - 4197701 + | DNA-binding transcriptional activator, xylose-binding TERM 5691 4197794 - 4197765 - T 100 -13 -4.26903 | CTGATGCGAGCAAAA GCCTTATCCGAC AGACAA ATCGGATAAGGC TCGAGGAAATGCAAT bax 4198633 - 4197809 - | hypothetical protein TERM 5692 4198390 - 4198400 + g 71 -2.4 -4.92777 | overlap 4198390 AAGGCATTACAGTCC GGAG AAA CGCC TTTTTCCTTGGTGTT TERM 5693 4199989 - 4199977 - g 91 -3.4 -5.54192 | ACGAAGTGAAAAAAA CGTT GGGTG AACG CTGGAGCGACTGGAA TERM 5694 4200908 - 4200926 + G 72 -6.6 -4.2461 | overlap 4200915 ACAAACGACACTTTC GCTGAAGC AGG GCTACGGC TTTGTTCGTGAGCAT malS 4198953 - 4200983 + | alpha-amylase TERM 5695 4202253 - 4202241 - g 71 -9.1 -3.54741 | TATCAGCGCCTGAAA GCACG CGG CGTGC TGATGGTGCCGGGGC avtA 4201161 - 4202414 + | valine-pyruvate aminotransferase TERM 5696 4202462 - 4202407 - T 71 -8.5 -3.53012 | gap 2, opp_overlap 4202399 4202398 4202417, overlap 4202415 4202417 4202460 GCGCCTGGGCTGAAA GCC-ATT-AATACGCTATTCCGGCGTT GAGA AACGCCGGAAAAACGTTTCAAACAGGC TGCTGCCGTAGCCGA TERM 5697 4202452 - 4202415 - T 93 -13.5 -3.25088 | opp_overlap 4202417, overlap 4202407 4202417 GCTGAAAGCCATTAA TACGCTATTCCGGCGTT GAGA AACGCCGGAAAAACGTT TCAAACAGGCTGCTG TERM 5698 4202417 - 4202450 + T 100 -13.9 -3.53444 | opp_overlap 4202415 4202407 4202417 TGAAAGCCATTAATA CGCTATTCCGGCGTT GAGA AACGCCGGAAAAACG TTTCAAACAGGCTGC TERM 5699 4202450 - 4202417 - T 100 -16.1 -3.18776 | opp_overlap 4202417, overlap 4202415 4202407 TGAAAGCCATTAATA CGCTATTCCGGCGTT GAGA AACGCCGGAAAAACG TTTCAAACAGGCTGC yiaI 4202926 - 4202453 - | putative hydrogenase, 4Fe-4S ferredoxin-type component yiaJ 4203876 - 4203028 - | DNA-binding transcriptional repressor TERM 5700 4203945 - 4203957 + H 73 -2.7 -5.10029 | GATAATTTATAACCA CTTGA TTT TTAAG TTTTTTGAAATTCAT yiaK 4204078 - 4205076 + | 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent yiaL 4205087 - 4205554 + | hypothetical protein yiaM 4205672 - 4206145 + | transporter TERM 5701 4206291 - 4206330 + G 81 -10 -3.96327 | opp_overlap 4206284 4206298, overlap 4206294 GGCACAAACGCTGGT GAACGGAGCCGACAGC TTCTCCCT GCTGGCGATTCCGTTC TTTGTGCTGGCGGGT yiaN 4206148 - 4207425 + | transporter yiaO 4207438 - 4208424 + | transporter TERM 5702 4208557 - 4208614 + G 81 -12.7 -3.23216 | gap 1 CCGCAGCCAGGTTGG GCAGAGCGCGATATGGCAGAACTGTGGC AAT GCTGCATGGCTGTCAT-TCGCGCCCTGC TTACTCATACTGGCG lyxK 4208428 - 4209924 + | L-xylulose kinase sgbH 4209921 - 4210583 + | 3-keto-L-gulonate 6-phosphate decarboxylase TERM 5703 4210784 - 4210811 + G 75 -11.3 -2.90349 | overlap 4210783 CGGGTGTTGCCATTC CGTCGATGTGC CTGTCC GCACATCGTCG CTTTCCCTTTGGCAG TERM 5704 4211101 - 4211079 - g 78 -5.4 -4.82855 | overlap 4211081 CAGCAAATGGAAAAA GTGGGACGAG ATG CTCGCCTCGC CGTGGTTCACCGTCT sgbU 4210576 - 4211436 + | putative L-xylulose 5-phosphate 3-epimerase sgbE 4211430 - 4212125 + | L-ribulose-5-phosphate 4-epimerase ECUMN_4097 4212972 - 4212157 - | putative transcriptional regulator protein TERM 5705 4213308 - 4213274 - g 77 -3.4 -5.0538 | overlap 4213276 4213277 CTGTACGGGAAAAAA TAGGCTACGGCCTGGG TGA CGCAGGCGGCACCGTA ATAACTTGCCTGATC ECUMN_4098 4213198 - 4214598 + | putative permease of the major facilitator superfamily TERM 5706 4215311 - 4215295 - g 70 -5 -4.44797 | CCAGGAATATGAAAA GCGCGG GCAGA CCTCGC ACTGGCACACCTACG TERM 5707 4215984 - 4215970 - g 70 -5.6 -4.37092 | opp_overlap 4215956, overlap 4215956 4215971 AGTGCCGGTAGAAAA TGGCAC GTT GTGCCT GCGGGTTAGCGGGAA ECUMN_4099 4214609 - 4216573 + | hypothetical protein TERM 5708 4216672 - 4216650 - T 80 -10.5 -3.85114 | opp_overlap 4216650 4216649, overlap 4216651 4216662 AAACGCGAGATTAAA CGCCCGGCA ATACA CGCCGGGCA GCTTCTGCCAGAAAC TERM 5709 4216671 - 4216651 - T 80 -11.8 -2.90345 | opp_overlap 4216650 4216649, overlap 4216650 4216662 AACGCGAGATTAAAC GCCCGGCA ATACA CGCCGGGC AGCTTCTGCCAGAAA ECUMN_4100 4217055 - 4216645 - | hypothetical protein TERM 5710 4216854 - 4216837 - G 72 -6.9 -4.15044 | opp_overlap 4216845 TTGCCCGCCAATAAA GTCCTGC GCAC GCTGGAC CAGATGTGTTTCCAC TERM 5711 4217024 - 4217006 - G 74 -2.2 -5.11613 | overlap 4217008 ACATCAGGGAAAAAA CCGCTGGC GCT GCCGTCAG GATCACTGTGGATAT ECUMN_4101 4217257 - 4217072 - | conserved hypothetical protein, putative YcfA-like protein ECUMN_4102 4217232 - 4217405 + | hypothetical protein TERM 5712 4217522 - 4217492 - TR 71 -10.5 -2.79919 | overlap 4217491 ATAAAACGCGCAAAC GTCGCATCAGGCA ATGAA TACCCAATGCGAC CAGCTTCTTATATCA aldB 4219073 - 4217535 - | aldehyde dehydrogenase B TERM 5713 4218357 - 4218345 - G 71 -9.1 -3.55444 | opp_overlap 4218344 4218351 CGTTGAGCCGGTAAA CGCCA CTT TGGCG ATGCGTTTCGAGGTC TERM 5714 4218824 - 4218804 - G 85 -11.9 -3.66356 | overlap 4218809 ATCGGCAATCTTAAA CAGAATCGC CGC GCGATCCTG CACCGAGGTATGCGC TERM 5715 4219228 - 4219199 - R 71 -5.1 -4.5464 | opp_overlap 4219199 4219202, overlap 4219194 4219211 CAGAGATAACTAAAA CTCTCTCAAAAAT CGCA AATTTTGAGATAG TTTAAAAAATGGCTG TERM 5716 4219258 - 4219238 - R 93 -9 -5.08169 | AGATAGTTTAAAAAA TGGCTGAC AATTA GCCAGCCA TTGGGGGAATGATGA yiaY 4220425 - 4219274 - | Fe-containing alcohol dehydrogenase TERM 5717 4220564 - 4220517 - R 77 -8.9 -3.71672 | gap 1, opp_overlap 4220528, overlap 4220528 GTTTATCAAAATTAA TCTAATAAAAAGCACATTGTAT TCATT AAACAATGTGCTTTTT-TTAAA TTCATAAGAATTTTG TERM 5718 4220528 - 4220554 + r 100 -8.1 -5.54192 | opp_overlap 4220517 4220528 TTAATCTAATAAAAA GCACATTGTAT TCATT AAACAATGTGC TTTTTTTAAATTCAT TERM 5719 4220554 - 4220528 - R 87 -8.1 -5.13741 | opp_overlap 4220528, overlap 4220517 TTAATCTAATAAAAA GCACATTGTAT TCATT AAACAATGTGC TTTTTTTAAATTCAT TERM 5720 4220646 - 4220636 - R 70 -6.8 -4.08557 | TTCCGGAAATAATAA TGCG TCG CGCA ATAAATGATCATTTC selB 4222459 - 4220615 - | selenocysteinyl-tRNA-specific translation factor TERM 5721 4222014 - 4222067 + g 71 -11.2 -2.94322 | gap 2, opp_overlap 4222031, overlap 4222012 4222031 ATTCCCCGACCTTCG GTTGCTGCGGTGATAAACAGTTTTGC CTCA GCAAAACCGTAT-TC-CCGCAGCACC TCCTTTACCTGGCGT TERM 5722 4222052 - 4222031 - G 76 -9.5 -3.85698 | opp_overlap 4222014 4222012 4222031 TGCTGCGGTGATAAA CAGTTTTGC CTCA GCAAAACCG TATTCCCGCAGCACC selA 4223847 - 4222456 - | selenocysteine synthase yibF 4224553 - 4223945 - | putative glutathione S-transferase TERM 5723 4224096 - 4224082 - G 70 -10 -3.12999 | CGACGGCACAGGCAA TGGCGA TAG TCGCCA GATTGACCGTATCGG TERM 5724 4224524 - 4224511 - G 70 -5.3 -4.35348 | ACAACAGAATAGAAA GTTTG CGTA CAAAC GGGCTGGTGTAGCTA yibH 4225760 - 4224624 - | hypothetical protein yibI 4226125 - 4225763 - | conserved hypothetical protein; putative inner membrane protein TERM 5725 4226401 - 4226386 - H 95 -3.3 -5.62288 | opp_overlap 4226386 CTAACAAAACAAAAA TGTGA CATTAC TCACA TTTAAATGCCATTTT TERM 5726 4228196 - 4228163 - g 70 -10.4 -3.21276 | overlap 4228161 TGGGCGCGGAGAACA TCTTCCTCGGTCGC AAAGCG GCAACCAAAGAAGA AGCGATTCGTTTTGC TERM 5727 4228305 - 4228282 - g 75 -5.2 -4.59773 | opp_overlap 4228282 CTGGATCGTGAAAAA CTGACCCCGA CTTA TCTGGGTGAG TCTATCGCGGTGCCA mtlA 4226662 - 4228575 + | fused mannitol-specific PTS enzymes: IIA components ; IIB components ; IIC components TERM 5728 4228580 - 4228610 + F 72 -8.3 -3.69395 | gap 1, opp_overlap 4228581, overlap 4228581 GTCGTAAGTAATCCA ATCCCACC-TCTCC ACAT GGAGAAGGTGGGGC TTATTGCCTGATGCG TERM 5729 4228581 - 4228609 + F 79 -11.8 -2.81316 | gap 1, opp_overlap 4228581, overlap 4228580 TCGTAAGTAATCCAA TCCCACC-TCTCC ACAT GGAGAAGGTGGGG CTTATTGCCTGATGC TERM 5730 4228609 - 4228581 - f 72 -9.6 -3.23899 | gap 1, opp_overlap 4228581 4228580 TCGTAAGTAATCCAA TCCCACC-TCTCC ACAT GGAGAAGGTGGGG CTTATTGCCTGATGC TERM 5731 4228720 - 4228739 + F 100 -13.6 -3.64703 | CGCATCCGGCACGGC CCCTCTCC ACAT GGAGAGGG TTTGGGTGAGGGAAA TERM 5732 4229187 - 4229169 - g 74 -7.4 -4.07885 | CATCGCCTGTGAAAA CATGGTAC GCG GCACCACG CAGCTGAAAGGCCAT mtlD 4228804 - 4229952 + | mannitol-1-phosphate dehydrogenase, NAD(P)-binding TERM 5733 4230380 - 4230406 + G 77 -12.2 -2.74144 | overlap 4230380 TGGTGAACTGCATTG CGTGGCGGCGTT ACC ACCGCCGCCACA GTTTGAACCTGCAGA TERM 5734 4230380 - 4230407 + G 85 -12 -3.57144 | gap 1, overlap 4230380 TGGTGAACTGCATTG C-GTGGCGGCGTT ACC ACCGCCGCCACAG TTTGAACCTGCAGAC mtlR 4229952 - 4230539 + | DNA-binding repressor TERM 5735 4230554 - 4230536 - T 74 -8.2 -4.10855 | AAAAGCCTTCCAAAA GTAAGCAA CGT CTGCTTAC TGCCCCTCTACCTGC yibT 4230760 - 4230551 - | hypothetical protein yibL 4231044 - 4231406 + | hypothetical protein TERM 5736 4231451 - 4231474 + F 79 -11.8 -2.61144 | gap 1, overlap 4231450 4231448 ACTCACGATTTACTC GCTCCTGC-TG GCA CATGCAGGAGC CTGTTTCAGAGATCG TERM 5737 4231994 - 4231983 - g 71 -2.2 -4.94058 | TGAACCTAAAGAAAA CACT GTTA AGCG TGTTAATAATAGTGC TERM 5738 4232550 - 4232540 - g 81 -8.2 -4.35518 | AATCTGACATTAAAA GGCG TTT CGCC TAATAACCTGAAGTA ECUMN_4115 4231967 - 4232650 + | conserved hypothetical protein; putative exported protein TERM 5739 4232668 - 4232648 - f 100 -4.7 -6.04324 | opp_overlap 4232652, overlap 4232653 CGAAAAAACAAAAAA TAAATGCAG CTT CTGCGCTTA TATCAAGGAATAGAG TERM 5740 4234811 - 4234790 - f 84 -8.7 -4.30844 | overlap 4234797 4234798 ATGCCACCAGCAAAA TCACCAACG TCAC CGCTGGCGA CCTGACGGCTGGCAG TERM 5741 4236427 - 4236405 - f 74 -9.8 -3.28712 | overlap 4236406 GGCTGTGGGTTATAA CGCTGTCGCC TCA GGCGAAAGCA GCGTAGCCATTGGTC TERM 5742 4236426 - 4236406 - f 74 -11.1 -2.57132 | overlap 4236405 GCTGTGGGTTATAAC GCTGTCGCC TCA GGCGAAAGC AGCGTAGCCATTGGT TERM 5743 4237332 - 4237320 - f 71 -9.1 -3.28712 | TGCTGCCGCTGACAA CAGCG TCG CGCTG GGTACAGGCTCCGTG TERM 5744 4238072 - 4238097 + F 100 -14.1 -4.79174 | CAGTTCAACAATCTG GGGCAATTCTC TGAT GGGAATTGCCC TTTTCTTCATTACCT lldP 4238337 - 4239992 + | L-lactate permease TERM 5745 4240405 - 4240374 - g 76 -3.8 -4.98672 | gap 1, overlap 4240375 GCGAAAAAGAGAAAA TTCAGCTTTGCTTTG AAG CAACGCTAAG-TGAA GACCCGGATCTCGCC TERM 5746 4240550 - 4240562 + G 71 -2.6 -5.02074 | CGCCAGCGAATGTAT CTGG TACCC CCGG TTTTTTCACAGCTGA lldR 4239992 - 4240768 + | DNA-binding transcriptional repressor TERM 5747 4240881 - 4240863 - g 72 -11 -3.05343 | overlap 4240865 TGCATATTCTGAATA CACGCTGC GCC GCAACGTG GAAGATTTGTCAGAA TERM 5748 4241154 - 4241169 + G 74 -8.2 -3.91897 | GTTCCAGCTTTATGT GCTGCG CGAT CGCGGC TTTATGCGTAACGCA lldD 4240765 - 4241955 + | L-lactate dehydrogenase, FMN-linked TERM 5749 4242004 - 4242026 + F 79 -12 -2.79302 | opp_overlap 4241992 CAATTTTCTGCTATC CTGCCCCC GCACTAA GGGGGCAG TATGCTAAACATCGT yibK 4242028 - 4242501 + | putative rRNA methylase TERM 5750 4242562 - 4242617 + T 77 -3.2 -5.22104 | gap 1, opp_overlap 4242562, overlap 4242562 4242563 4242565 GACAGTTTCAGTTAA C-CGGCTTTTTGATGCTCAGTCCGGTA TTC TACCGGACTGAGTCCCCCAAGACTGAG TTTTATTCTTTTTTG ECUMN_4122 4243280 - 4242558 - | transposase ORF B, IS3 family, IS150 group TERM 5751 4243104 - 4243116 + g 73 -9.1 -3.6761 | overlap 4243102 GAGTCCCATATTTCC CCGGT AAG ACCGG TATTTCTTCAGGCGC ECUMN_4123 4243915 - 4243385 - | transposase ORF A, IS1397 TERM 5752 4243417 - 4243427 + g 82 -2.4 -5.40072 | overlap 4243412 TTCGTTTTTTCTCCA GCTC CTG GCGC TTTTTTTCCAGGAGA cysE 4244810 - 4243989 - | serine acetyltransferase TERM 5753 4244864 - 4244835 - R 87 -11.5 -3.56987 | gap 1, overlap 4244838 CACACGATGAGATAA TGA-CCGGCCCG TTCTGCG CGGGCCGGGTCA TAGAGGTAACAAAGG TERM 5754 4244860 - 4244838 - R 86 -13.4 -2.90888 | overlap 4244835 ACGATGAGATAATGA CCGGCCCG TTCTGCG CGGGCCGG GTCATAGAGGTAACA gpsA 4245909 - 4244890 - | glycerol-3-phosphate dehydrogenase (NAD+) TERM 5755 4245803 - 4245829 + g 78 -8.7 -4.1552 | gap 1 ATATGTTCAGGGTCA TGGCCCCAGAGG ACAA CCTC-GTGGCCA TTTCTTGCCAGGGTG TERM 5756 4245907 - 4245923 + g 81 -10.9 -3.69283 | overlap 4245918 AGCATTACGTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 4246376 - 4245909 - | protein export chaperone grxC 4246690 - 4246439 - | glutaredoxin 3 yibN 4247264 - 4246833 - | putative rhodanese-related sulfurtransferase TERM 5757 4248042 - 4248025 - g 83 -5.6 -5.11112 | AAATTCGAAGAAAAA TTTGCC GCACTG GGCAAA GGCCGCGTAGCGTCC gpmI 4247509 - 4249053 + | phosphoglycero mutase III, cofactor-independent TERM 5758 4249124 - 4249173 + G 81 -9.3 -4.07568 | gap 1, opp_overlap 4249124, overlap 4249135 GCAGGTTTGCAATCA GGCCCATCAT-CTACGCCAGCGTT CTT AGCGCTGGCGTATTGTTGTGCGCC TTTTCCGCCCACGCG TERM 5759 4249135 - 4249161 + G 100 -17.4 -3.81022 | opp_overlap 4249124, overlap 4249124 ATCAGGCCCATCATC TACGCCAGCGTT CTT AGCGCTGGCGTA TTGTTGTGCGCCTTT TERM 5760 4249308 - 4249267 - g 83 -10.1 -4.0911 | CAAAAGCAACAACAA CGCTCCAGCCTGCTTGCTC AGTT GAAAAAGCAGGAAGAAGCG ATCTCGGAAGCCACC TERM 5761 4249455 - 4249417 - g 75 -5 -4.77036 | overlap 4249402 4249419 CTGGAGCAGCAAAAA GCCGCCCAGGAGCGCAGC CTC GCCGCACAACTGGATGCC GCATTCCGTCAGGGC envC 4249087 - 4250346 + | protease with a role in cell division TERM 5762 4250482 - 4250472 - g 77 -6.8 -4.48987 | opp_overlap 4250454 CCCGCACAACGAAAA CCAG GTG CTGG CGATGCCTTCCGCTA yibQ 4250350 - 4251309 + | putative polysaccharide deacetylase yibD 4252330 - 4251296 - | putative glycosyl transferase TERM 5763 4252539 - 4252562 + r 88 -11 -4.23674 | opp_overlap 4252526 4252542, overlap 4252542 GATTATCCTCAGGAA AAAGGGCTGG AATA CCAGCCCTTG TTTGTGTTAATCCCA TERM 5764 4252542 - 4252559 + r 100 -12.7 -4.2338 | opp_overlap 4252542, overlap 4252539 TATCCTCAGGAAAAA GGGCTGG AATA CCAGCCC TTGTTTGTGTTAATC TERM 5765 4252559 - 4252542 - R 100 -12.7 -4.72986 | opp_overlap 4252539 4252542 TATCCTCAGGAAAAA GGGCTGG AATA CCAGCCC TTGTTTGTGTTAATC tdh 4253594 - 4252569 - | threonine 3-dehydrogenase, NAD(P)-binding TERM 5766 4253417 - 4253434 + g 74 -2.7 -5.00884 | ATTCATGGCCCACGA CCATC GGCACCGG GATGG TTTTTTGCGACCACT kbl 4254800 - 4253604 - | glycine C-acetyltransferase TERM 5767 4255000 - 4255031 + r 80 -11.8 -2.95091 | opp_overlap 4255001 4255008, overlap 4255008 TGCATTGATATAAAA AGAAAAAATGATGC CAAA GCATCATTTTTTCC TATCTCAGTTGGCAT TERM 5768 4255030 - 4255001 - R 100 -15.3 -4.99035 | opp_overlap 4255000 4255008, overlap 4255008 GCATTGATATAAAAA GAAAAAATGATGC CAAA GCATCATTTTTTC CTATCTCAGTTGGCA TERM 5769 4255008 - 4255023 + r 91 -7.6 -5.24989 | opp_overlap 4255001 4255008, overlap 4255000 TATAAAAAGAAAAAA TGATGC CAAA GCATCA TTTTTTCCTATCTCA TERM 5770 4255023 - 4255008 - R 100 -7.6 -5.98675 | opp_overlap 4255008 4255000, overlap 4255001 TATAAAAAGAAAAAA TGATGC CAAA GCATCA TTTTTTCCTATCTCA htrL 4255933 - 4255076 - | hypothetical protein TERM 5771 4255594 - 4255607 + g 82 -2.3 -5.32944 | opp_overlap 4255587 4255586, overlap 4255588 4255595 AAACATACTCTGGTG ACCAG TACT CTGGG TTTTTTAATTGTCGA TERM 5772 4255975 - 4255965 - H 70 -2.6 -4.94703 | AATATAAAAAAAGAA TTAT ATC ATAA ATATTAACAGAATGT TERM 5773 4256658 - 4256642 - g 81 -6.5 -4.87626 | opp_overlap 4256642, overlap 4256635 CGCGAATATGAAAAA CCGTTGA ATG TCTACGG TTACTCAAAATTCCT TERM 5774 4256830 - 4256818 - g 73 -9.1 -3.65522 | opp_overlap 4256815 4256829 CACTCAGCTTAACAA CGGTG AAT CACCG AAGCTGTTTGAAGGT waaD 4256237 - 4257169 + | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding waaF 4257179 - 4258225 + | ADP-heptose:LPS heptosyltransferase II waaC 4258229 - 4259221 + | ADP-heptose:LPS heptosyl transferase I TERM 5775 4259719 - 4259730 + G 82 -2.2 -5.33405 | CACCGTAGCATTTCT GACT CGAT GGTC TTTTTATTTCCTGCA rfaL 4259218 - 4260426 + | O-antigen ligase TERM 5776 4260434 - 4260462 + T 86 -11.1 -4.15222 | opp_overlap 4260440, overlap 4260440 ACAAGTAAAAAAAAT AAAAAAGGCTGCA TAA TGCGGCCTTTTTA TTTATTCAAACCAAT TERM 5777 4260440 - 4260456 + T 100 -10.1 -5.47159 | opp_overlap 4260440, overlap 4260434 AAAAAAAATAAAAAA GGCTGCA TAA TGCGGCC TTTTTATTTATTCAA TERM 5778 4260456 - 4260440 - T 100 -7.9 -6.17033 | opp_overlap 4260434 4260440 AAAAAAAATAAAAAA GGCTGCA TAA TGCGGCC TTTTTATTTATTCAA rfaK 4261606 - 4260464 - | Lipopolysaccharide 1, 2-N-acetylglucosaminetransferase rfaJ 4262628 - 4261615 - | Lipopolysaccharide 1,2-glucosyltransferase rfaY 4263360 - 4262653 - | Lipopolysaccharide core biosynthesis protein rfaY rfaI 4264393 - 4263386 - | Lipopolysaccharide 1,3-galactosyltransferase waaP 4265242 - 4264436 - | kinase that phosphorylates core heptose of lipopolysaccharide TERM 5779 4264625 - 4264605 - G 77 -3.3 -5.10461 | TTCATCGAAGAAAAA TAAAGCCCT ATA AGATCTTTA TCGCGCCAACGACGT waaG 4266350 - 4265226 - | glucosyltransferase I waaQ 4267405 - 4266347 - | lipopolysaccharide core biosynthesis protein TERM 5780 4268439 - 4268414 - g 84 -7.5 -4.61482 | opp_overlap 4268412 GGGCGCAAAAAATAA TCAGGTGACCG TTAC CGGTAGCCTGA AATTCGATATTTCTG TERM 5781 4268965 - 4268955 - g 70 -6.8 -4.08945 | opp_overlap 4268955 ACTACGCTTGCAAAA GAGG TTT CCTC TTTACTCACCGACGC kdtA 4267818 - 4269095 + | 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) coaD 4269103 - 4269582 + | pantetheine-phosphate adenylyltransferase mutM 4270430 - 4269621 - | formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase TERM 5782 4270510 - 4270481 - R 100 -13.7 -3.51924 | opp_overlap 4270481 4270488, overlap 4270488 GGGGCAGGCAGATAA CAAAAAACCCCGC CGGG GCGAGGTTTTTCG TTACATCAAAGCAAA TERM 5783 4270488 - 4270503 + r 81 -6 -4.88407 | opp_overlap 4270481 4270488, overlap 4270481 GCAGATAACAAAAAA CCCCGC CGGG GCGAGG TTTTTCGTTACATCA TERM 5784 4270503 - 4270488 - R 100 -8.2 -5.60689 | opp_overlap 4270488 4270481, overlap 4270481 GCAGATAACAAAAAA CCCCGC CGGG GCGAGG TTTTTCGTTACATCA rpmG 4270695 - 4270528 - | 50S ribosomal subunit protein L33 TERM 5785 4270572 - 4270596 + g 70 -3.6 -4.62872 | gap 1, opp_overlap 4270572 CGTGCTGGCGAACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGCTTAGT rpmB 4270952 - 4270716 - | 50S ribosomal subunit protein L28 TERM 5786 4271156 - 4271143 - R 72 -6.7 -4.2074 | overlap 4271146 TCCCGAACAGACAAA GATCC CGAA GGATC GCGCATAGCGGGTTA yicR 4271837 - 4271169 - | protein associated with replication fork, putative DNA repair protein dfp 4272009 - 4273229 + | fused 4'-phosphopantothenoylcysteine decarboxylase ; phosphopantothenoylcysteine synthetase, FMN-binding TERM 5787 4273539 - 4273567 + G 77 -3 -5.08601 | opp_overlap 4273543, overlap 4273544 4273554 GGACAGCTTCACCAT TCAACCTGGCGA ACGCA TCGCCCAGATGA TTTTTGTTCCGGTAG dut 4273210 - 4273665 + | deoxyuridinetriphosphatase TERM 5788 4273718 - 4273698 - f 79 -11.9 -2.50817 | overlap 4273697 4273695 4273693 AACGTCATAACATAG CCGCAAACA TTT CGTTTGCGG TCATAGCGTGGGTGC ttk 4273772 - 4274368 + | division inhibitor TERM 5789 4274372 - 4274399 + T 86 -9.8 -4.41348 | opp_overlap 4274371 4274369 4274374, overlap 4274373 4274374 CAGTTGCAGTAATAT GACGCCGGATGA CTTT TCATCCGGCGAG TTTCTTTAAACGCCG TERM 5790 4274373 - 4274398 + T 91 -13.3 -3.24488 | opp_overlap 4274371 4274369 4274374, overlap 4274372 4274374 AGTTGCAGTAATATG ACGCCGGATGA CTTT TCATCCGGCGA GTTTCTTTAAACGCC TERM 5791 4274374 - 4274397 + T 100 -16.8 -2.54371 | opp_overlap 4274371 4274369 4274374, overlap 4274373 4274372 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC TERM 5792 4274397 - 4274374 - T 100 -16.8 -2.77523 | opp_overlap 4274374 4274373 4274372, overlap 4274371 4274369 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC pyrE 4275046 - 4274405 - | orotate phosphoribosyltransferase TERM 5793 4275104 - 4275087 - R 100 -11.3 -6.06529 | TACAGACAAAAAAAA GGCGACT CATC AGTCGCC TTAAAAATCAGTTTG rph 4275852 - 4275112 - | ribonuclease PH yicC 4275955 - 4276818 + | hypothetical protein TERM 5794 4277244 - 4277213 - g 100 -16 -2.63079 | opp_overlap 4277198 4277210, overlap 4277209 4277210 TGGTCACACAATTGA TGACCATTTCGAGG AGAT CCTCGATATGGTCA AAATTGGCTCAAATG TERM 5795 4277427 - 4277439 + G 75 -4.8 -4.83615 | opp_overlap 4277418 AGGCAACTTCGTGAA GACG AAAAG CGTC TTTTTCTGAGAAATG dinD 4277040 - 4277864 + | DNA-damage-inducible protein yicG 4278155 - 4278772 + | conserved hypothetical protein; putative inner membrane protein TERM 5796 4278792 - 4278817 + T 93 -11.9 -3.89354 | CAAAACCTGTGATCT GCTGGGCAG CCAGCCAA CTGCCCAGC TTCTTGATTTGCGCA ligB 4280451 - 4278769 - | DNA ligase, NAD(+)-dependent TERM 5797 4280532 - 4280551 + H 70 -6.4 -4.18488 | AACGGAGTCTGCGAG GACGCTTC CTGA GAATCGTC TTTATTGCAGTGAAT TERM 5798 4280764 - 4280776 + G 82 -9.1 -4.15044 | opp_overlap 4280764 4280760 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA gmk 4280709 - 4281332 + | guanylate kinase rpoZ 4281387 - 4281662 + | RNA polymerase, omega subunit TERM 5799 4282237 - 4282219 - g 70 -5.2 -4.371 | opp_overlap 4282219, overlap 4282213 TCCACCACATTAAAA CCGAACTC GAA GAGCTGGG TTTTGAGGCGCTGTA TERM 5800 4282755 - 4282738 - g 72 -7.7 -3.90318 | gap 1 GCACCACCGCACAAA TCC-GCGC CCA GCGCTGGA TGCAAAGCCTGCTGG spoT 4281681 - 4283789 + | bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase trmH 4283796 - 4284485 + | tRNA (Guanosine-2'-O-)-methyltransferase recG 4284491 - 4286572 + | ATP-dependent DNA helicase TERM 5801 4286598 - 4286575 - T 81 -9.5 -4.14392 | opp_overlap 4286576, overlap 4286576 4286591 CTCGAATGCGTAAAA GGCGGCGGT GAGAAG ACCGCCGCT TCATCGGTTAACCGG TERM 5802 4286576 - 4286597 + T 91 -13 -3.21912 | opp_overlap 4286576 4286575 4286591 TCGAATGCGTAAAAG GCGGCGGT GAGAAG ACCGCCGC TTCATCGGTTAACCG TERM 5803 4286597 - 4286576 - T 86 -13 -3.08314 | opp_overlap 4286576, overlap 4286575 4286591 TCGAATGCGTAAAAG GCGGCGGT GAGAAG ACCGCCGC TTCATCGGTTAACCG gltS 4287811 - 4286606 - | glutamate transporter TERM 5804 4287475 - 4287485 + g 72 -6.8 -4.18018 | opp_overlap 4287475 GGCTAGCCATACCAA TGCC AAT GGCA TTTTGCATCACCAAC TERM 5805 4288024 - 4288035 + H 73 -4.4 -4.80455 | TTAGATGAGGATGTG GCAA ACGT TTGC TTTTATCTTTCGGTC TERM 5806 4288136 - 4288119 - g 90 -9.9 -4.42386 | CCTCGAGTCAGAAAA TGCGCAA CCGG TTGCGCA GACTCAAAACAGCGA TERM 5807 4289023 - 4289011 - g 76 -9.1 -3.83026 | overlap 4289020 CCGCTGTACATGAAA CGCCT GAA AGGCG GCGTGCTGGCAAACG TERM 5808 4289358 - 4289371 + G 72 -6.7 -4.24002 | CGGTCTGGGCGTGTC TCAGC AGCC GCTGA TTTTGCAGTTTGCCC yicE 4288090 - 4289481 + | putative transporter TERM 5809 4289488 - 4289476 - f 74 -4.1 -4.91109 | opp_overlap 4289455, overlap 4289482 4289483 4289486 TTCCCACCAGAAAAA CAGTA ATT CACTG GCGGCGGTAAGATAA TERM 5810 4289515 - 4289486 - f 84 -13 -2.63644 | gap 1, overlap 4289476 4289483 4289482 AAAAACAGTAATTCA CTGGCGGCGGTAA GATAA TTACCGCCGC-AG TCTCACCTCTTTCAC yicH 4289602 - 4291311 + | hypothetical protein TERM 5811 4291352 - 4291320 - f 70 -9.7 -2.90218 | opp_overlap 4291322, overlap 4291319 4291315 GCAGTAAAAATCAAT CTCGCCGGGTACGAC TCA GACGTACCCGGCATT CCGTCAATAGATTAC TERM 5812 4291322 - 4291350 + F 89 -14.5 -3.08312 | opp_overlap 4291320 4291319 4291315 AGTAAAAATCAATCT CGCCGGGTACGAC TCA GACGTACCCGGCA TTCCGTCAATAGATT TERM 5813 4292594 - 4292619 + F 100 -9.8 -5.61596 | opp_overlap 4292594 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT TERM 5814 4292619 - 4292594 - f 75 -9.1 -3.61398 | opp_overlap 4292594 GTGGCTGTGTAAGAA TCCGGAAAC GCTCACTT GTTTCCGGA TTTTTTTATGCACAT insG 4292627 - 4293955 + | putative IS4 transposase; KpLE2 phage-like element TERM 5815 4293966 - 4293937 - T 88 -9.3 -4.59109 | overlap 4293939 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACAGACCTGGCTGC TERM 5816 4293964 - 4293939 - T 100 -16.3 -3.90762 | overlap 4293937 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGACCTGGCT yicJ 4296512 - 4295130 - | putative transporter TERM 5817 4295314 - 4295327 + g 78 -5.2 -4.83615 | ATGATGCTAATCGTG GCGC TGTTCT GCGC TTTTTCTGCCGCATC TERM 5818 4297681 - 4297694 + G 85 -3.1 -5.4505 | GAACTGAAAGCCCGT CCTAT AATG GTAGG TTTTTTCTTCACCGG setC 4297537 - 4298721 + | putative sugar efflux system TERM 5819 4298760 - 4298746 - f 71 -2 -5.06414 | overlap 4298748 CTGGGCTAAGAAAAA TCGGCG TGG CGCAAA CAGAGCCATCCTCGC yicL 4298832 - 4299755 + | conserved hypothetical protein; putative inner membrane protein nlpA 4300577 - 4299759 - | cytoplasmic membrane lipoprotein-28 yicS 4300718 - 4301080 + | hypothetical protein TERM 5820 4301190 - 4301211 + F 74 -6.6 -4.39375 | CCCGTTCATCAGGAT TGTGGAGG AATTTC CCTCTACA TTGTTTTCATTTCAT ECUMN_4181 4301382 - 4301879 + | conserved hypothetical protein, putative type III secretion chaperone ECUMN_4182 4302126 - 4303907 + | hypothetical protein TERM 5821 4304125 - 4304102 - g 93 -6 -5.30189 | overlap 4304104 TATAATATTAAAAAA TACAGACAGA GAAG TCTGTCCGGA ACTAAGAGTAAAACT TERM 5822 4304123 - 4304104 - g 78 -8.6 -4.26398 | overlap 4304102 TAATATTAAAAAATA CAGACAGA GAAG TCTGTCCG GAACTAAGAGTAAAA TERM 5823 4304374 - 4304355 - g 78 -9.3 -3.99228 | opp_overlap 4304353 4304355 ACATCAATGTATAAA GCCTCAG CTATGT CTGAGGC TATTATGAGCAATGT TERM 5824 4304451 - 4304425 - g 73 -3.6 -4.84146 | overlap 4304426 ATCAGAGAAAAGAAA CCGAACGCGCCA CAG CAGCAAGTTCGA TAGGTGTTATTATCG ECUMN_4183 4303920 - 4305071 + | hypothetical protein TERM 5825 4305211 - 4305184 - g 78 -10.6 -3.54307 | gap 1, overlap 4305173 4305171 4305165 4305201 AACATTCCTCTCAAA GAGGCATCCTCGC AAA GTGAGGA-GCCTC ATCAACTGGGAAACA ECUMN_4184 4305115 - 4306464 + | hypothetical protein TERM 5826 4306772 - 4306760 - g 79 -4.9 -4.89063 | TTATTCAAAAACAAA GAATA TCA TATTC CACCGAAAGAACTTG ECUMN_4185 4306667 - 4308364 + | putative Transcriptional regulator TERM 5827 4308403 - 4308374 - T 100 -15.9 -3.34089 | opp_overlap 4308371 4308378, overlap 4308378 GCGTAATAACGAATA TAAATTGCCCTGC TGAA GCAGGGCAATCTA GTGATTACTTCGTTA TERM 5828 4308399 - 4308378 - T 100 -14.5 -4.30231 | opp_overlap 4308371 4308378, overlap 4308374 AATAACGAATATAAA TTGCCCTGC TGAA GCAGGGCAA TCTAGTGATTACTTC TERM 5829 4308378 - 4308399 + T 89 -14.5 -2.8785 | opp_overlap 4308378 4308374, overlap 4308371 AATAACGAATATAAA TTGCCCTGC TGAA GCAGGGCAA TCTAGTGATTACTTC ECUMN_4186 4318672 - 4308416 - | Hypothetical protein, putative Bacterial Ig-like domain (group 1), putative Autotransporter adhesin TERM 5830 4312828 - 4312844 + g 71 -9.4 -3.4252 | GTGTGTTCGCCATTG CGCCGT CAGCC ACGGCG TTATCCTGCGTCACC TERM 5831 4313410 - 4313426 + g 71 -9.4 -3.4252 | GCGTGTTCGCCATTG CGCCGT CAGCC ACGGCG TTATCCTGCGTCACC TERM 5832 4315782 - 4315800 + g 75 -6.6 -4.42386 | overlap 4315784 GTAACTTTTATCGCA CCGCCTGC GGT GTAGGCCG TTTTGTCGGTAACGA TERM 5833 4316422 - 4316445 + g 74 -7.4 -4.1413 | overlap 4316413 TGGCAACTGCGTTAT TCGCGGTGAT CTGC ATCGCAGCGA TTTTGGCGGTATCTT TERM 5834 4317463 - 4317478 + g 75 -5.4 -4.62783 | gap 1 GTCGTGCTGCAACTT CAGC-CG GAT CGAGCTG TTTTTGCAGTGAATG yicM 4320232 - 4318874 - | transporter TERM 5835 4319580 - 4319565 - G 80 -5.4 -5.00884 | gap 1 AGCTCGCCTAAAAAA CTGC-CC AAC GGCGCAG CAATCACCAGCGCAA TERM 5836 4319637 - 4319602 - G 72 -6.8 -4.20368 | gap 1, overlap 4319587 4319584 4319614 4319617 CCAGCGCAATAGAAA CCGCGCCGAAGATCACC GAC AGCG-CCTTCGGCACCG TACGCGGCGGTACCA TERM 5837 4319860 - 4319844 - G 75 -5.1 -4.67607 | overlap 4319845 TGGGTAATAAACAAA CTGGCAA ACA TTGCCAC AAAGGCGGTCACGGT TERM 5838 4320025 - 4320035 + g 77 -8.2 -4.09864 | GTCGGGTGATGGCAT CCGC GCC GCGG TTTTCGGCAATAAAT ECUMN_4188 4320285 - 4320644 + | hypothetical protein ECUMN_4189 4320628 - 4320951 + | conserved hypothetical protein, putative transcriptional regulator yicN 4321519 - 4321067 - | hypothetical protein yicO 4322906 - 4321572 - | putative xanthine/uracil permease TERM 5839 4322393 - 4322415 + g 77 -3.4 -5.16237 | opp_overlap 4322368, overlap 4322395 4322396 TCACCAGGGTGTCTT TATTGGCG ACAATAA CGCCAGTG TTTTTTAATCCCATT TERM 5840 4323102 - 4323080 - H 73 -2.8 -5.09245 | TCAAAATGAGAAAAA TATGAATAAT TCT ATTAACCATA AATTTCATCACATTA ade 4323081 - 4324847 + | cryptic adenine deaminase TERM 5841 4324884 - 4324852 - T 100 -11.3 -4.46854 | opp_overlap 4324859, overlap 4324856 4324858 4324859 TCACTGAATAATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA AATGCGCCTATAAGG TERM 5842 4324880 - 4324856 - T 91 -9.9 -4.78597 | opp_overlap 4324859, overlap 4324852 4324858 4324859 TGAATAATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCAAATGCGCCTAT TERM 5843 4324878 - 4324858 - T 100 -12.5 -3.98538 | opp_overlap 4324859, overlap 4324856 4324852 4324859 AATAATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCAAATGCGCCT TERM 5844 4324859 - 4324877 + T 100 -16 -4.62069 | opp_overlap 4324858 4324856 4324852 4324859 ATAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC TERM 5845 4324877 - 4324859 - T 100 -16 -2.96683 | opp_overlap 4324859, overlap 4324858 4324856 4324852 ATAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCAAATGCGCC ECUMN_4193 4325468 - 4324959 - | transposase IS605 family, IS200 group ECUMN_4194 4325595 - 4325374 - | hypothetical protein TERM 5846 4325530 - 4325548 + gr 100 -16 -4.52589 | GAAAGCTTTCCGGAA CCCCCAGC CTA GCTGGGGG TTTTCTGTGCACAAA TERM 5847 4325586 - 4325568 - GR 100 -13.1 -5.60993 | CTGTGCACAAAAAAA GCCCGGC GTCAT GCCGGGC AAAAGTCACCAGTTA uhpT 4326996 - 4325605 - | hexose phosphate transporter TERM 5848 4326429 - 4326415 - G 70 -6.4 -4.20368 | overlap 4326417 CGACGGGAAGATAAA CATGCC GAT GACATG GCCATCGAACAGGTA uhpC 4328453 - 4327134 - | membrane protein regulates uhpT expression TERM 5849 4327416 - 4327404 - G 76 -9.1 -3.73872 | ACCAATAGTGAAGAA GCAGG TTG CCTGC ATCACGTAGCTGGCA uhpB 4329965 - 4328463 - | sensory histidine kinase in two-component regulatory sytem with UhpA uhpA 4330555 - 4329965 - | DNA-binding response regulator in two-component regulatory system wtih UhpB TERM 5850 4330604 - 4330580 - R 91 -7.8 -5.24129 | opp_overlap 4330579 4330580 CTGGCGGATAAAAAA CGCGCATACC TTAAC GATAAGCGCG ATGTTGTTCAAGTTG TERM 5851 4330659 - 4330696 + r 100 -15.1 -3.38812 | gap 1, opp_overlap 4330667, overlap 4330667 TGATGTTGGTCTTAT CGT-CAAAACGCTTACCT GAA AGGTAAGCGTTTGGTACG TGTTATTGCGAAAAA TERM 5852 4330687 - 4330667 - R 100 -14.1 -4.11216 | opp_overlap 4330659 4330667 GTCTTATCGTCAAAA CGCTTACCT GAA AGGTAAGCG TTTGGTACGTGTTAT TERM 5853 4330667 - 4330687 + r 100 -14.1 -3.79882 | opp_overlap 4330667, overlap 4330659 GTCTTATCGTCAAAA CGCTTACCT GAA AGGTAAGCG TTTGGTACGTGTTAT ECUMN_4199 4332207 - 4330717 - | hypothetical protein TERM 5854 4331003 - 4330989 - G 71 -2.9 -4.79667 | AAAAGTCAGCAAAAA GAAAA TTTGT TTTTC CCATCAAAGCACAAA TERM 5855 4331499 - 4331517 + g 70 -6.8 -4.06491 | TTAATTTATCTGGAA TCAATTCA TAT TGGATTGA TTTATCTGGAGTTGA TERM 5856 4332307 - 4332323 + r 74 -8.1 -4.11394 | TAATAAGACCATGTG TCGTTAA TTT TTAACGA TTTTCCCAATGCAAT ECUMN_4200 4333769 - 4332462 - | hypothetical protein TERM 5857 4333584 - 4333595 + g 71 -2.2 -4.97158 | ACCGGACATAATATT TGCT ATTA AGCG TTTTATTTCCTGTAA TERM 5858 4333919 - 4333945 + r 100 -13.8 -3.60502 | opp_overlap 4333919 TCCTGGGCTAATAAA TTGTGCCTGAGA TGG TCTCTGGCACAA TTTCACCCTATATAT TERM 5859 4333945 - 4333919 - R 100 -13.8 -4.15044 | opp_overlap 4333919 TCCTGGGCTAATAAA TTGTGCCTGAGA TGG TCTCTGGCACAA TTTCACCCTATATAT ilvN 4334312 - 4334022 - | acetolactate synthase I, small subunit TERM 5860 4334153 - 4334164 + g 74 -5.8 -4.45485 | CGTCATTGACCAGTA GCCA GATA TGGC TTTTGTCGCTGTCCT ilvB 4336004 - 4334316 - | acetolactate synthase I, large subunit TERM 5861 4336058 - 4336082 + r 93 -11.4 -4.16279 | gap 1, opp_overlap 4336058, overlap 4336035 TGCTTAAACGAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 5862 4336082 - 4336058 - R 100 -10.7 -4.98531 | gap 1, opp_overlap 4336035 4336058 TGCTTAAACGAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG ivbL 4336208 - 4336110 - | ilvB operon leader peptide TERM 5863 4336145 - 4336181 + g 70 -5.8 -4.27584 | gap 1, overlap 4336154 CCACCACCACACGCA CGACGACC-ACTGCGGC GGAT GGCGCAGTTGGTAGTAG TTTTGCGTTGAACAT TERM 5864 4336359 - 4336344 - H 100 -8.2 -5.4833 | opp_overlap 4336344 GCAGGTAACAAAAAA CCCCGC CGGA GCGAGG TTTCGTCAGTCGCCT ECUMN_4204 4336482 - 4336640 + | hypothetical protein TERM 5865 4336906 - 4336885 - f 100 -17.3 -3.74747 | opp_overlap 4336885 TCAAGTCGCACTAAA GGGGAGCGG GTAA CCGCTCCCC TTTTATATTTAGCGT TERM 5866 4336885 - 4336906 + F 100 -17.3 -4.79451 | opp_overlap 4336885 TCAAGTCGCACTAAA GGGGAGCGG GTAA CCGCTCCCC TTTTATATTTAGCGT TERM 5867 4336976 - 4336995 + F 72 -3.5 -4.93288 | overlap 4336977 GCCCTACCATCCCTC CCGGCAA CATTTA TTGCCGC TTTTGTTTACATATT TERM 5868 4337890 - 4337909 + G 80 -5.6 -5.02074 | overlap 4337892 TCAGTATTTTGTTTA TTCTGCCG ATTC CGGCGGCA TTTTTTGGGGCATGG emrD 4337142 - 4338326 + | multidrug efflux system protein yidF 4338831 - 4338334 - | putative DNA-binding transcriptional regulator TERM 5869 4338461 - 4338427 - G 90 -7.7 -4.92757 | opp_overlap 4338427 GGAGTAAGAATAAAA CGCCTGATAGCCCGC ACATA GCACGCTGTCTGGCG TCTCCTCCCGAGCGT TERM 5870 4338763 - 4338749 - G 73 -4.2 -4.86033 | opp_overlap 4338753 4338755 AAATTGTGATAAAAA TCGGCA GGT TGCAGA GCATCCTTGTACTCT yidG 4339190 - 4338828 - | conserved hypothetical protein; putative inner membrane protein yidH 4339527 - 4339180 - | conserved hypothetical protein; putative inner membrane protein TERM 5871 4339901 - 4339916 + G 70 -6.1 -4.17556 | CGCACTGGCCATTGC TGCGC TACTTT GCGCA TTTATTGGCGGTATG yidI 4339635 - 4340084 + | conserved hypothetical protein; putative inner membrane protein TERM 5872 4340124 - 4340098 - T 72 -8.7 -3.64259 | opp_overlap 4340098 AAGCAGCCTGAATAA TGCCCGCCG GGTGATCAT CAGCGGGCA TTATCGTCAGAACTT TERM 5873 4340132 - 4340142 + T 83 -5.4 -5.31275 | AGCGGGCATTATCGT CAGA ACT TCTG TTTTTTCTCCTCCAC yidJ 4341624 - 4340131 - | putative sulfatase/phosphatase yidK 4343336 - 4341621 - | transporter TERM 5874 4344389 - 4344357 - g 85 -11.3 -3.61517 | overlap 4344359 4344360 AGCTGTGCTGAAGAA TACGGACCAGCACCC AAC GGATGCCAGTCCACA CAATTAACGTAACTC TERM 5875 4344387 - 4344359 - g 80 -11.7 -3.38812 | overlap 4344357 4344360 CTGTGCTGAAGAATA CGGACCAGCACCC AAC GGATGCCAGTCCA CACAATTAACGTAAC TERM 5876 4344386 - 4344360 - g 81 -13 -2.63073 | overlap 4344359 4344357 TGTGCTGAAGAATAC GGACCAGCACCC AAC GGATGCCAGTCC ACACAATTAACGTAA yidL 4343473 - 4344396 + | putative DNA-binding transcriptional regulator ECUMN_4213 4345715 - 4344393 - | 6-phospho-glucosidase ECUMN_4214 4347592 - 4345715 - | putative PTS system alpha-glucoside-specific EIICB component TERM 5877 4346024 - 4346035 + g 70 -5.8 -4.22041 | TGCCGCGGTGGTTTG GCCT CGCG AGGC TTTGTATTCGGCTTT TERM 5878 4346471 - 4346461 - G 75 -6.8 -4.43208 | ACATCGCTAAAGAAA TGCC CAC GGCA CCAAAGATTTTTGAG TERM 5879 4347540 - 4347554 + g 100 -2.9 -5.81412 | opp_overlap 4347540, overlap 4347543 ACAGCATCGAACACA TCTTT AAAAA AAAGA TTTTTTTTCAATCGA TERM 5880 4347870 - 4347847 - g 76 -9.5 -3.74872 | ATGTATTGCATCAAA CCGCCAGCC TGACCG GGCTGGTGG AGGTGTTAAAACGCC TERM 5881 4348332 - 4348298 - g 75 -11.5 -3.10071 | gap 1, opp_overlap 4348301 AAATGCCAGCGAATA CCAGGTGGAGT-ACCA TTTA CGGCGACTCCACCCGG AGAAGAGTTAACCGA yidP 4347627 - 4348343 + | putative DNA-binding transcriptional regulator yidE 4350001 - 4348340 - | putative transporter TERM 5882 4350181 - 4350161 - R 100 -14.7 -5.90231 | AGAAAGACAAAAAAA GCCCCACCA GAA TGGCGGGGC AAAGAGAATAGCTAG ibpB 4350625 - 4350197 - | heat shock chaperone TERM 5883 4350350 - 4350379 + g 88 -2.1 -5.57729 | opp_overlap 4350350 4350351, overlap 4350340 AAAGCTCAGGCTAAA TGGCTGATTCA TAAGCCCT TGATGCAGCCA TTTTTTCTCTTCTTT ibpA 4351150 - 4350737 - | heat shock chaperone yidQ 4351456 - 4351788 + | conserved hypothetical protein; putative outer membrane protein yidR 4353004 - 4351790 - | hypothetical protein TERM 5884 4352196 - 4352229 + g 70 -7.3 -4.0098 | gap 1, opp_overlap 4352193 4352206 GTAAAGGTTAAACGT CGCTGCACAACGCCAC GCG GTGGCGCGG-GCAGGG TTGTTTCCGTTCCGC TERM 5885 4352220 - 4352206 - G 80 -11.4 -3.29043 | opp_overlap 4352196, overlap 4352193 AACGTCGCTGCACAA CGCCAC GCG GTGGCG CGGGCAGGGTTGTTT TERM 5886 4352476 - 4352486 + g 72 -4.6 -4.67943 | TGCCGCTGTATTCAC GCGG ATG CTGC TTTTGTATGTTGACC TERM 5887 4353220 - 4353206 - g 81 -6.4 -4.82901 | overlap 4353209 4353210 CGCGCTGGATAAAAA GCACCA GCA TGGTAC TGAAGGTTTCAGCAA TERM 5888 4353980 - 4353994 + G 70 -10 -3.20348 | overlap 4353965 4353964 CTATGCGCTGGATAG CGCAGA GAT TCTGCG TTCGGTGTTACTGAA TERM 5889 4354111 - 4354090 - g 95 -9.4 -4.87807 | opp_overlap 4354090 GTAAGATAGTAAAAA GCCGATGC CTGACC GCACCGGC TTTAAGAAAGTGGAT TERM 5890 4354155 - 4354121 - g 85 -10.1 -4.15222 | opp_overlap 4354129 ACCGGCTTTAAGAAA GTGGATTATGCGC AGTGGTGTG GCGCATATTCCAC AGTTGAAAGATTATC cbrA 4353084 - 4354205 + | putative oxidoreductase with FAD/NAD(P)-binding domain dgoT 4355458 - 4354166 - | D-galactonate transporter TERM 5891 4354698 - 4354688 - G 77 -3.2 -5.08601 | overlap 4354676 CCAGGTTAAGAAAAA CCAC AGT GTAG AAGCCACCGCAAATT dgoD 4356726 - 4355578 - | galactonate dehydratase dgoA 4357340 - 4356723 - | 2-oxo-3-deoxygalactonate 6-phosphate aldolase dgoK 4358202 - 4357324 - | 2-oxo-3-deoxygalactonate kinase dgoR 4358888 - 4358199 - | putative DNA-binding transcriptional regulator yidX 4359049 - 4359822 + | putative lipoprotein C TERM 5892 4359829 - 4359857 + T 93 -14 -3.1485 | gap 1, overlap 4359827 4359823 AATTGTTAATCGCTG CGGGCAAAC-GCA TTCA TGCCGTTTGCCCG TTCACTGATTAATTC yidA 4360678 - 4359866 - | putative hydrolase TERM 5893 4360586 - 4360598 + g 72 -5.5 -4.56775 | GCCACGGGCGCGAGC TGCGG CAA TCGCA TTTTTAACGGCGGGT TERM 5894 4360758 - 4360786 + r 79 -8.2 -4.4078 | gap 2, opp_overlap 4360758 4360757 4360745, overlap 4360757 4360757 4360784 CACCCGAAGGAAAAG GGGGATGCAACGCG CGT TGCGT-GC-TCCCC TTTTGCTTAGCGGAA yidB 4361191 - 4360793 - | hypothetical protein TERM 5895 4361269 - 4361299 + r 85 -11.2 -3.47751 | opp_overlap 4361274, overlap 4361274 GCGGATTGCAGAAAT AAAAAGGGCGAAGA TGA TCTCCGCCCTTTTC TTATAGCTTCTTGCC TERM 5896 4361294 - 4361274 - R 100 -13.3 -5.38054 | opp_overlap 4361269 4361274 TTGCAGAAATAAAAA GGGCGAAGA TGA TCTCCGCCC TTTTCTTATAGCTTC TERM 5897 4361274 - 4361294 + r 95 -11.1 -4.80959 | opp_overlap 4361274, overlap 4361269 TTGCAGAAATAAAAA GGGCGAAGA TGA TCTCCGCCC TTTTCTTATAGCTTC gyrB 4363845 - 4361431 - | DNA gyrase, subunit B TERM 5898 4363184 - 4363204 + g 76 -3.9 -4.88918 | ACGAACGCCTTGATG CCGCCTTCA TAG TGGAAGTGG TTTTCTTTACCGTCG TERM 5899 4363435 - 4363458 + g 77 -6.6 -4.56597 | ACGGTGAATTTTACC CTCGCGCTGG ATAA CCAGCTCCAG TTTTTGCGACAGGGC recF 4364947 - 4363874 - | gap repair protein TERM 5900 4364389 - 4364429 + g 70 -10.3 -3.15078 | overlap 4364387 GCCAGGTACTGATTT GCTCCGCCAGCGGGATCAG TTC TTTATCCCACGGGCGTAGC TGTTCGTAACGTGTC TERM 5901 4364814 - 4364795 - G 73 -9.2 -3.63968 | overlap 4364788 CTGCAAACTGCGAAA CGCCCGAC CATG GCCGAGCG TATAGATGGCTTCCA dnaN 4366047 - 4364947 - | DNA polymerase III, beta subunit dnaA 4367455 - 4366052 - | chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator TERM 5902 4366980 - 4367020 + g 72 -8.3 -3.75153 | gap 1, overlap 4366984 4366988 GCACCGCCAGGGTTA TCT-GCCACCTGGCGAGC CGCCGC GCGCGCCAGTTGGTTAGA TTTACCTTCAACGAA TERM 5903 4366984 - 4367015 + g 80 -11.5 -3.30781 | overlap 4366980 4366988 CGCCAGGGTTATCTG CCACCTGGCGAGC CGCCGC GCGCGCCAGTTGG TTAGATTTACCTTCA TERM 5904 4366988 - 4367011 + g 71 -9.5 -3.43217 | overlap 4366984 4366980 AGGGTTATCTGCCAC CTGGCGAGC CGCCGC GCGCGCCAG TTGGTTAGATTTACC TERM 5905 4367126 - 4367145 + g 74 -10 -3.54129 | gap 1, opp_overlap 4367125 4367124, overlap 4367144 TGAGCGCGTAGAAGG CGCAGCACG TTG CG-GCTGCG TTTGCGCCACCTGTG rpmH 4368062 - 4368202 + | 50S ribosomal subunit protein L34 TERM 5906 4368403 - 4368383 - gf 74 -2.6 -5.06816 | gap 1 AGTCGCCAAGAAAAA CGTTCGACG CGCC CAT-GAACG CAATCGGATTAAACG rnpA 4368219 - 4368578 + | protein C5 component of RNase P yidD 4368542 - 4368799 + | hypothetical protein yidC 4368802 - 4370448 + | cytoplasmic insertase into membrane protein, Sec system TERM 5907 4370492 - 4370473 - f 82 -9.2 -4.17048 | opp_overlap 4370474, overlap 4370474 TTTTCGCTAAAATAA GGGCGGTC AGTT GACCGCCT TTTTTCTTTTCGTAG TERM 5908 4370491 - 4370474 - f 83 -12.7 -3.09908 | opp_overlap 4370474, overlap 4370473 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5909 4370474 - 4370491 + F 100 -12.7 -5.83211 | opp_overlap 4370474 4370473 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5910 4371576 - 4371562 - g 76 -7.8 -4.20516 | overlap 4371572 GTGGTACGCAATAAA GCCGAT ATA ACCGGC GAAACGCTGGGAATG trmE 4370554 - 4371918 + | GTPase TERM 5911 4371927 - 4371962 + F 88 -12 -3.53712 | gap 1, opp_overlap 4371919 4371932, overlap 4371926 4371928 4371950 TAAGTAACTGCGCTT ACGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCGC TTCATTGTTAGCACT TERM 5912 4371928 - 4371961 + F 93 -15.5 -2.71745 | gap 1, opp_overlap 4371919 4371932, overlap 4371926 4371927 4371950 AAGTAACTGCGCTTA CGAAGCCGTATTCTGA CTG TCAGA-TGCGGCTTCG CTTCATTGTTAGCAC tnaC 4372160 - 4372234 + | tryptophanase leader peptide TERM 5913 4373104 - 4373088 - g 78 -8 -4.35524 | CTGGCAAACTTAAAA GCGATG TACAG CATCGC GAAGAAATACGATAT tnaA 4372455 - 4373870 + | tryptophanase/L-cysteine desulfhydrase, PLP-dependent TERM 5914 4374064 - 4374074 + G 75 -4.6 -4.85599 | TACCTGTTGATCTTG CCGG TGC CTGG TTTTTCTGGGGTGCC tnaB 4373961 - 4375208 + | tryptophan transporter of low affinity TERM 5915 4375238 - 4375221 - f 72 -8.4 -3.62046 | opp_overlap 4375221, overlap 4375201 TGATCCCTTCAAGAA GCCAGC CATTTC GCTGGC TTATTGCCTGTCAGG TERM 5916 4375221 - 4375238 + F 72 -8.4 -3.70773 | opp_overlap 4375201 4375221 TGATCCCTTCAAGAA GCCAGC CATTTC GCTGGC TTATTGCCTGTCAGG mdtL 4375341 - 4376516 + | multidrug efflux system protein yidZ 4376491 - 4377450 + | putative DNA-binding transcriptional regulator yieE 4377595 - 4378356 + | putative phosphopantetheinyl transferase TERM 5917 4378770 - 4378780 + G 72 -6.8 -4.2828 | TCAGTATCACCTGCG CCAG ATT CTGG TTTTCCTCGATGCAA yieF 4378378 - 4378944 + | chromate reductase, Class I, flavoprotein TERM 5918 4378977 - 4378953 - T 100 -12.2 -5.65927 | gap 1, opp_overlap 4378953 4378969 4378971 GATCTAAATAAAAAA CCCGCCA-GCA ATCA TGCATGGCGGG TTTTTAACGCGCTAT TERM 5919 4378953 - 4378977 + T 100 -12.2 -4.57837 | gap 1, opp_overlap 4378953, overlap 4378969 4378971 GATCTAAATAAAAAA CCCGCCA-GCA ATCA TGCATGGCGGG TTTTTAACGCGCTAT yieG 4380335 - 4378998 - | conserved hypothetical protein; putative inner membrane protein TERM 5920 4380214 - 4380200 - G 83 -5.7 -5.06414 | GCGGGTTAACAAAAA CGATG TAAAC CATCG TCAGGAAGGTGGTAA TERM 5921 4380488 - 4380476 - H 73 -6.3 -4.30576 | TTGGCATGACGAAAA CGTTA AAC TAACG ATAAAGGAAAGACAT yieH 4380502 - 4381167 + | putative hydrolase ECUMN_4247 4383712 - 4381304 - | conserved hypothetical protein, putative ATPase involved in DNA repair TERM 5922 4383864 - 4383883 + H 71 -7.8 -3.8046 | opp_overlap 4383868, overlap 4383865 TTATTTCCATTTTAA CCCAGGGT GTTC ACCCTGGA TTTGCAATTTTTAGG TERM 5923 4383865 - 4383882 + H 78 -11.3 -2.87553 | opp_overlap 4383868, overlap 4383864 TATTTCCATTTTAAC CCAGGGT GTTC ACCCTGG ATTTGCAATTTTTAG TERM 5924 4384396 - 4384406 + G 76 -4 -5.0133 | ACTGATGAACAGATC GAAA ATA TTTC TTTTTTAAACGCATA ECUMN_4248 4384018 - 4385205 + | hypothetical protein ECUMN_4249 4388194 - 4385675 - | conserved hypothetical protein, putative ATPase involved in DNA repair phoU 4389317 - 4388592 - | negative regulator of PhoR/PhoB two-component regulator pstB 4390105 - 4389332 - | phosphate transporter subunit ; ATP-binding component of ABC superfamily pstA 4391086 - 4390196 - | phosphate transporter subunit ; membrane component of ABC superfamily pstC 4392045 - 4391086 - | phosphate transporter subunit ; membrane component of ABC superfamily pstS 4393173 - 4392133 - | phosphate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5925 4393414 - 4393386 - R 71 -9.6 -3.10589 | opp_overlap 4393385 4393386, overlap 4393392 CAAAAATGCGTAAGA TGACAACGGTGT GAGGA ACACCGCGGTCA GTTCGTTTAGCGTAC lpfD 4394491 - 4393421 - | putative fimbrial protein LpfD; putative adhesin TERM 5926 4393690 - 4393706 + g 72 -8.1 -3.95022 | opp_overlap 4393689 TAGCATAAAAAGAGG TACTGAT ATC ATCAGTA TTTAGTATTCCTAAA lpfC 4397024 - 4394502 - | Putative fimbrial usher lfpB 4397780 - 4397049 - | putative fimbrial chaperone protein lpfA 4398400 - 4397828 - | Putative major fimbrial subunit TERM 5927 4398442 - 4398459 + r 70 -7.1 -3.98256 | opp_overlap 4398441, overlap 4398441 TTTACCATGAATCAT CACTTAT ATTA ATAAGTG TATTTTTGATCCAAA TERM 5928 4398698 - 4398657 - R 86 -13.9 -2.6574 | opp_overlap 4398668 4398691, overlap 4398668 GAATTATTGATATCA CTTATAAAAAAGGGCCGCC GGTC GGCAGCCCTTTTCTATCAA CGAGAGATATTACTC TERM 5929 4398668 - 4398687 + r 93 -10.6 -4.52589 | opp_overlap 4398657 4398668 ATCACTTATAAAAAA GGGCCGCC GGTC GGCAGCCC TTTTCTATCAACGAG TERM 5930 4398687 - 4398668 - R 100 -12.8 -5.28778 | opp_overlap 4398668, overlap 4398657 ATCACTTATAAAAAA GGGCCGCC GGTC GGCAGCCC TTTTCTATCAACGAG glmS 4400537 - 4398708 - | L-glutamine:D-fructose-6-phosphate aminotransferase TERM 5931 4399706 - 4399740 + g 81 -6.4 -4.74801 | gap 1, opp_overlap 4399705 4399709, overlap 4399709 CCAGCTCGCTTAAAT CAACCTGACCGTGGC TGATGC GCC-CGGTAAGGGTG TTTTTGATCGCGTTC glmU 4402069 - 4400699 - | fused N-acetyl glucosamine-1-phosphate uridyltransferase ; glucosamine-1-phosphate acetyl transferase TERM 5932 4401307 - 4401294 - G 70 -5.2 -4.34402 | overlap 4401295 CCGCGCAGATCAAAA CGCG CCGGAT CGCG CAGCATAACGCCTGC TERM 5933 4401319 - 4401331 + g 84 -7.7 -4.62302 | CGCGCAGCATAACGC CTGCT AAC AGCAG TTTTTCAGCCTGTTC TERM 5934 4402371 - 4402402 + r 73 -10.2 -3.08032 | opp_overlap 4402376, overlap 4402376 GGGGCAACGCGTAAA AAAAAGCCAGCCTG TTTC CAGACTGGCTTTTG TGCTTTTCAAGCCGG TERM 5935 4402376 - 4402397 + r 91 -10.1 -4.67635 | opp_overlap 4402376, overlap 4402371 AACGCGTAAAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA TERM 5936 4402397 - 4402376 - R 100 -12.3 -5.77853 | opp_overlap 4402376 4402371 AACGCGTAAAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA atpC 4402839 - 4402420 - | F1 sector of membrane-bound ATP synthase, epsilon subunit atpD 4404242 - 4402860 - | F1 sector of membrane-bound ATP synthase, beta subunit TERM 5937 4404009 - 4404032 + g 76 -7.4 -4.18018 | CGCTTTACCTACCGG GACTTCGATC GGGT GTTCGAGGTC TTTTACATCCAGACC TERM 5938 4404286 - 4404300 + r 70 -10 -2.57244 | opp_overlap 4404275 4404274, overlap 4404283 AAACCGCGGCGGCCC CCGAGA CGA TCTCGG TGAGTTCCTGAGTAA atpG 4405132 - 4404269 - | F1 sector of membrane-bound ATP synthase, gamma subunit TERM 5939 4404957 - 4404990 + g 100 -14.7 -3.91897 | opp_overlap 4404957 TTATATTCCAGATTA CCGTGTGCAAGGTGA CCAA TCACTTTGCGCATGG TTTCTGCATAAGGAC atpA 4406724 - 4405183 - | F1 sector of membrane-bound ATP synthase, alpha subunit TERM 5940 4406162 - 4406198 + g 77 -8.7 -4.13014 | overlap 4406163 CATTTGATACCGGAA TCGCGCTGGTTGATGAT GGC ATCGATAGCCAGTGCGG TTTTACCGGTCTGAC atpH 4407270 - 4406737 - | F1 sector of membrane-bound ATP synthase, delta subunit TERM 5941 4407096 - 4407140 + g 72 -5.1 -4.50686 | gap 3, opp_overlap 4407091 4407094, overlap 4407091 4407097 CTGCGATAAACGACT CGGC-GAGCGT-T-TCTGGCGC AAGC GCGCCAGAGAGAAGCTCTGCCA TTTGTTCGTTTTTGG atpF 4407755 - 4407285 - | F0 sector of membrane-bound ATP synthase, subunit b TERM 5942 4407629 - 4407650 + g 70 -3.7 -4.67353 | CTGCGGAAGCAAGAC CGTCAGCAA TTTC TTTTTGACG TTTTTCGATGGCTGC TERM 5943 4407656 - 4407684 + g 73 -11.8 -2.77899 | gap 1, overlap 4407653 CTTTTTGACGTTTTT CG-ATGGCTGCCA TTAA TGGCGGCCATACG TACTTCATGCAGAAC atpE 4408056 - 4407817 - | F0 sector of membrane-bound ATP synthase, subunit c atpB 4408918 - 4408103 - | F0 sector of membrane-bound ATP synthase, subunit a TERM 5944 4408605 - 4408585 - G 74 -11.1 -3.17051 | overlap 4408583 GGTTCATCAGGAATA CCCAGACGA AGA TCGTCAGGG CCAGCGGAGCAATCA atpI 4409307 - 4408927 - | ATP synthase, membrane-bound accesory subunit TERM 5945 4409836 - 4409799 - R 100 -9.3 -5.52384 | gap 1, opp_overlap 4409798, overlap 4409827 TGCTTACCAAAAAAA GCCACGTT-ACTTTGTTG ATG CAAAAGAGTGAACGTGGC GTTAAATGTAACCAG gidB 4410547 - 4409924 - | methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein TERM 5946 4410572 - 4410599 + r 100 -14.2 -4.77759 | overlap 4410596 4410597 CTGTTCTTGATGCGT TGCCCGGTAAGC GGGT GCTTACCAGGCA TTTTTAATGCGTTAT gidA 4412500 - 4410611 - | glucose-inhibited cell-division protein mioC 4413322 - 4412879 - | FMN-binding protein MioC asnC 4413870 - 4413412 - | DNA-binding transcriptional dual regulator TERM 5947 4414064 - 4414075 + G 70 -4.4 -4.46926 | CGTCAAATTAGCTTC GTGA AATC TCAC TTTTCTCGTCAACTG TERM 5948 4414331 - 4414276 - g 100 -17.1 -2.75074 | gap 2 CTTAGGGCAACACGA CTTCAGCGCGGGCGAAGGGCTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGTCTTTCCCCGT asnA 4414022 - 4415014 + | asparagine synthetase A yieM 4416470 - 4415019 - | putative von Willibrand factor containing protein TERM 5949 4416104 - 4416092 - G 75 -4.8 -4.84017 | AACGCTGGAGAAAAA GCGT GTGTA ACGC TGAAGTGATCGTGCT ravA 4417960 - 4416464 - | fused regulatory ATPase variant A ; conserved hypothetical protein TERM 5950 4418111 - 4418125 + H 79 -4.2 -5.24129 | overlap 4418110 ATTTTGCCGTTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5951 4418312 - 4418335 + G 76 -3.8 -4.88736 | overlap 4418309 4418308 CAGTTTGGTTTTGGC GTTGAACGCG ATGC CGTGTTTGGC TTTTTATCGCTGATC TERM 5952 4418674 - 4418660 - g 70 -4.2 -4.68593 | TTTATGATTCAAAAA CATGGC ACG GCTATG GTCGGTAAGCTGTTT trkD 4418183 - 4420051 + | potassium transporter TERM 5953 4420059 - 4420083 + F 100 -9.3 -5.50723 | AAATCTAACGCCAGA CGCCTCCTT TCTCCAT AAGGGGGCG TTTTTGTTTTCATGG TERM 5954 4420576 - 4420606 + G 75 -11.3 -3.00907 | gap 1, overlap 4420570 4420585 4420604 AAAGTCAGGCGGTAA TTCGCA-GCGGAGA ATGT TCTCCGTATGCGAA TATCATTCTCTGTGC rbsD 4420218 - 4420637 + | putative cytoplasmic sugar-binding protein rbsA 4420645 - 4422150 + | fused D-ribose transporter subunits of ABC superfamily: ATP-binding components rbsC 4422155 - 4423120 + | D-ribose transporter subunit ; membrane component of ABC superfamily rbsB 4423145 - 4424035 + | D-ribose transporter subunit ; periplasmic-binding compoent of ABC superfamily TERM 5955 4424117 - 4424141 + F 86 -9.9 -4.38712 | opp_overlap 4424113 4424110, overlap 4424118 AAGAAAAGCAGGGCA CGCGCCACCCT AAC ACGGTGGCGCA TTTTATGGACATCCC TERM 5956 4424118 - 4424140 + F 91 -13.4 -3.22906 | opp_overlap 4424113 4424110, overlap 4424117 AGAAAAGCAGGGCAC GCGCCACCCT AAC ACGGTGGCGC ATTTTATGGACATCC rbsK 4424161 - 4425090 + | ribokinase TERM 5957 4425114 - 4425130 + G 90 -11.5 -3.91897 | opp_overlap 4425112, overlap 4425115 TACAATGAAAGATGT TGCCCGC CTG GCGGGCG TTTCTACCTCAACAG TERM 5958 4425115 - 4425129 + G 78 -12.8 -2.94924 | opp_overlap 4425112, overlap 4425114 ACAATGAAAGATGTT GCCCGC CTG GCGGGC GTTTCTACCTCAACA rbsR 4425094 - 4426086 + | DNA-binding transcriptional repressor of ribose metabolism hsrA 4427479 - 4426052 - | multidrug or homocysteine efflux system yieP 4428194 - 4427502 - | putative transcriptional regulator TERM 5959 4430286 - 4430273 - R 74 -6.7 -4.41177 | overlap 4430277 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGACAC TERM 5960 4430512 - 4430488 - R 72 -8 -3.93061 | gap 1, opp_overlap 4430495 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5961 4431066 - 4431054 - R 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5962 4432367 - 4432356 - R 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5963 4433554 - 4433533 - R 76 -8.7 -3.91196 | opp_overlap 4433550 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAACAGAATTTGCC TERM 5964 4433906 - 4433925 + r 100 -10.8 -6.02914 | opp_overlap 4433903 4433906 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA TERM 5965 4433925 - 4433906 - R 76 -10.8 -3.00946 | opp_overlap 4433906, overlap 4433903 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA hdfR 4434832 - 4433993 - | DNA-binding transcriptional regulator TERM 5966 4434190 - 4434207 + g 72 -9.9 -3.31144 | CAATCTGTTGCTGTG CCAGTTC AGCA GAACTGG TTGTCAGAATGGGAA yifE 4434951 - 4435289 + | hypothetical protein TERM 5967 4435296 - 4435308 + T 100 -6.9 -6.02914 | opp_overlap 4435290 4435296, overlap 4435279 GACGATTAATAAAAA GGGCG AAA TGCCC TTTTTTTTATGTCAG TERM 5968 4435308 - 4435296 - T 83 -6.2 -5.15167 | opp_overlap 4435296 4435279, overlap 4435290 GACGATTAATAAAAA GGGC GAAAT GCCC TTTTTTTTATGTCAG yifB 4436865 - 4435315 - | putative bifunctional enzyme and transcriptional regulator TERM 5969 4435620 - 4435649 + g 82 -9.3 -4.26076 | opp_overlap 4435610 TTACACGTTGTTTAA CGGTGGTGCTG CTTTCTCC CGGCACTACCG TTTTACTCAAAATGC TERM 5970 4436207 - 4436219 + g 71 -10.5 -2.90813 | overlap 4436204 AGTAAAAGGTTGTGC CCGCC AGC GGCGG TAATTTCCAGCCCTC TERM 5971 4436688 - 4436703 + g 70 -6 -4.22535 | opp_overlap 4436680 TGATAATGGCGCTGC GCACGC GATC GCGAGC TTCTTTTACCGTTGT TERM 5972 4437087 - 4437064 - H 74 -4 -5.00616 | opp_overlap 4437070 TTTCTTTTTAAAAAA CAACAATTTC TCTT GAAATTATTA AAGACATCATAAAAA ilvL 4437188 - 4437286 + | ilvG operon leader peptide TERM 5973 4437336 - 4437309 - f 85 -11.2 -3.45366 | opp_overlap 4437311, overlap 4437294 4437311 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGACCTTAAA TERM 5974 4437311 - 4437334 + F 100 -13.8 -5.81032 | opp_overlap 4437309 4437311 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5975 4437334 - 4437311 - f 100 -13.8 -3.29727 | opp_overlap 4437311, overlap 4437309 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5976 4437859 - 4437882 + G 74 -10.2 -3.43492 | AAGCATTCGACGTTG CCGGCTCAGG TCGT CCTGGTCCGG TTCTGGTCGATATCC TERM 5977 4438229 - 4438240 + G 70 -5.8 -4.25283 | CGACTTGCTGATCGC CGTG GGTG CACG TTTTGATGACCGGGT ilvG 4437426 - 4439072 + | Acetolactate synthase isozyme II large subunit (ALS-II) (Acetohydroxy-acid synthase II large subunit) (AHAS-II) ilvM 4439069 - 4439332 + | acetolactate synthase II, small subunit TERM 5978 4439339 - 4439322 - f 70 -5.5 -4.3767 | overlap 4439324 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAATATAAAAATG ilvE 4439352 - 4440281 + | branched-chain amino-acid aminotransferase TERM 5979 4440292 - 4440313 + F 85 -11.6 -3.53012 | opp_overlap 4440292 AATAAATACAAAAAA TGGGACGG CACGCA CCGTCCCA TTTACGAGACAGACA TERM 5980 4440313 - 4440292 - f 100 -12.3 -5.61913 | opp_overlap 4440292 AATAAATACAAAAAA TGGGACGGC ACGC ACCGTCCCA TTTACGAGACAGACA ilvD 4440346 - 4442196 + | dihydroxyacid dehydratase TERM 5981 4442298 - 4442280 - g 70 -10.2 -3.14132 | overlap 4442253 GCGCCGGTCTACGAA GCGGCGCA GGT CACGCCGC TACAGAAAATGGAAA TERM 5982 4442443 - 4442433 - g 79 -2.4 -5.30348 | overlap 4442434 4442435 ACGGAAGAACAAAAA GCGC ACG GCGT GATTACCGCTTCTGC TERM 5983 4442468 - 4442483 + G 75 -5.4 -4.63218 | gap 1, opp_overlap 4442434 4442435 4442468 TTCTGCAGGTAACCA CGCG-CA GGG TGTCGCG TTTTCTTCCGCACGG TERM 5984 4442892 - 4442909 + G 72 -8.3 -3.72893 | overlap 4442894 GGTCATCCCGTTGAT CTGCCCC GCGT GGGGCTG TTTGCTGAAGGCGTA TERM 5985 4442894 - 4442907 + G 71 -9.5 -3.44848 | overlap 4442892 TCATCCCGTTGATCT GCCCC GCGT GGGGC TGTTTGCTGAAGGCG ilvA 4442199 - 4443743 + | threonine deaminase ilvY 4444714 - 4443740 - | DNA-binding transcriptional dual regulator TERM 5986 4443778 - 4443794 + g 100 -9.4 -5.40072 | opp_overlap 4443768 4443778 AGAATGCCTCAATCA GCGGCT CATGC AGCCGC TTTTTTTGCGCACAC TERM 5987 4444596 - 4444581 - G 83 -10.4 -4.11216 | opp_overlap 4444572 4444571 4444587 4444587 GCGCTACGGCCAAAA TGGCGG CTTT CCGCCA GATGCAGGAAGGTTT TERM 5988 4444828 - 4444806 - g 70 -9.8 -3.19175 | CTTCAATACACTGAA TCTGCGCCAG CAG CTGGCACAGC TGGGCAAATGTCGCT TERM 5989 4445595 - 4445578 - g 76 -9.1 -3.71794 | overlap 4445569 ACCGAAGCACTGAAA CAGGGCG GCAT CACCCTG ATGATGGACCGTCTC ilvC 4444780 - 4446255 + | ketol-acid reductoisomerase, NAD(P)-binding TERM 5990 4446270 - 4446298 + T 100 -16.1 -3.24825 | overlap 4446271 4446274 AGTGCGATTCAGAGT TCAAGGCCTTCTC CCG GAGAAGGCCTTGC TGTTAGTTACGGTAA TERM 5991 4446271 - 4446297 + T 100 -19.6 -2.54574 | overlap 4446270 4446274 GTGCGATTCAGAGTT CAAGGCCTTCTC CCG GAGAAGGCCTTG CTGTTAGTTACGGTA TERM 5992 4446274 - 4446294 + T 100 -15.5 -3.42147 | overlap 4446271 4446270 CGATTCAGAGTTCAA GGCCTTCTC CCG GAGAAGGCC TTGCTGTTAGTTACG ppiC 4446582 - 4446301 - | peptidyl-prolyl cis-trans isomerase C (rotamase C) TERM 5993 4447133 - 4447111 - g 72 -6.9 -4.17425 | AGAACGATCTCAAAA CTCCGGCGC AGGCG GCGGCAGAG GCAAAGGGCGAGCGG TERM 5994 4448207 - 4448180 - g 84 -10.6 -3.72592 | AATGCGCATGAAGAA CGTCAACCAACT GTTT AGCTGGATGACG GAGATGCTGGAAGGC TERM 5995 4448526 - 4448511 - g 81 -10.4 -3.90922 | ACGCTGTGTAAAGAA CGCCGT CAGT ACGGCG AACTAGTGCGCCCGG rep 4446669 - 4448690 + | DNA helicase and single-stranded DNA-dependent ATPase TERM 5996 4448727 - 4448696 - T 74 -10.8 -2.76911 | opp_overlap 4448695 4448695, overlap 4448695 4448692 4448705 AGGGAAATAATCAAG GCCGGAAAAGATGC GTCA GCATCGCATCCGGC ACTTACTCATTAATG TERM 5997 4448718 - 4448705 - T 70 -6.7 -4.11751 | opp_overlap 4448695 4448695, overlap 4448696 4448695 4448692 ATCAAGGCCGGAAAA GATGC GTCA GCATC GCATCCGGCACTTAC TERM 5998 4448754 - 4448780 + T 75 -8.8 -3.73224 | gap 1 AATGCACTTCCAGCG GCCAGTGGACA TAGCTC TG-CCACTGGC TTTCCTGAGCAATAA gpp 4450221 - 4448737 - | guanosine pentaphosphatase/exopolyphosphatase TERM 5999 4449507 - 4449517 + g 70 -5.4 -4.40804 | overlap 4449502 TGGCTCGCTGTTTCA GTTG CTG CAAC TTTTCTAGGGTAATG TERM 6000 4449817 - 4449839 + g 71 -9.1 -3.48276 | GCCTATATCCACCAC CAGGCGCTG ATCGG CACCGCCTG TTGTGTGGGCCACCC rhlB 4451622 - 4450357 - | ATP-dependent RNA helicase TERM 6001 4450874 - 4450892 + g 100 -7.4 -5.5604 | overlap 4450875 CATTCTTCTTCGATC AGCGTTTG CAG CAAACGCA TTTTTTCTTCGTTAG TERM 6002 4450875 - 4450891 + g 86 -10.9 -3.91997 | overlap 4450874 ATTCTTCTTCGATCA GCGTTTG CAG CAAACGC ATTTTTTCTTCGTTA trxA 4451753 - 4452082 + | thioredoxin 1 rhoL 4452223 - 4452324 + | rho operon leader peptide TERM 6003 4452812 - 4452800 - g 70 -4.1 -4.63486 | ACGCCCGCAACAAAA TCCTC TTT GAGAA CTTAACCCCGCTGCA rho 4452409 - 4453668 + | transcription termination factor TERM 6004 4453683 - 4453712 + G 95 -13.7 -3.38183 | opp_overlap 4453688, overlap 4453688 AATTTGTCTTATGCC AAAAACGCCACGT GTTT ACGTGGCGTTTTG CTTTTATATCTGTAA TERM 6005 4453707 - 4453688 - g 100 -13.6 -4.62069 | opp_overlap 4453683 4453688 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC TERM 6006 4453688 - 4453707 + G 100 -13.6 -4.75518 | opp_overlap 4453688, overlap 4453683 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC ECUMN_4308 4453678 - 4453896 + | hypothetical protein TERM 6007 4453928 - 4453944 + G 100 -8.1 -5.7946 | TTTACTGACAGTGAG TACTGAT CTC ATCAGTA TTTTTTTATTCACGA TERM 6008 4454349 - 4454387 + G 89 -14 -3.14881 | opp_overlap 4454357, overlap 4454335 4454357 TTTGCCGTCTGGGCG GCCATTAATGCGTTCAAC ATG GTTGATGGCATTGATGGC TTGCTGGGCGGGTTG TERM 6009 4454974 - 4454964 - g 70 -6.8 -4.11751 | overlap 4454954 ATTAAGCGCGTAAAA CGCA GAC TGCG TAGAAATCGTGGTGG rfe 4453908 - 4455011 + | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase TERM 6010 4455437 - 4455417 - g 72 -11.1 -3.02144 | opp_overlap 4455421 4455422, overlap 4455422 GGATGGTGGGCAACA GCAAAGCCG ATG CGGCGTTGC TGGATGAAATGATTA TERM 6011 4455432 - 4455422 - g 74 -8.2 -3.92324 | opp_overlap 4455422 4455421, overlap 4455417 GTGGGCAACAGCAAA GCCG ATG CGGC GTTGCTGGATGAAAT wzzE 4455023 - 4456069 + | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein TERM 6012 4456080 - 4456105 + F 100 -18.3 -3.61517 | opp_overlap 4456069 4456073 4456076 AATAGCAACACTGCT GCGGTGAGCGC AAAG GCGCTCGCCGC TTATTCGAAGAGAAT TERM 6013 4456816 - 4456798 - g 78 -8.9 -4.15044 | GTGGCTTTGAAGAAA TCTGCCA TGCGC TGGCAGA CATCGCCACCACGCA rffE 4456125 - 4457255 + | UDP-N-acetyl glucosamine-2-epimerase TERM 6014 4457430 - 4457445 + G 76 -3.9 -5.00616 | CGAGCGTAGTAAAAA CTGCC GTAGAA GGCGG TTTTTTACGAGCGAG TERM 6015 4457907 - 4457922 + G 70 -5.4 -4.31692 | CCGAAAACAGCTTCC GCGATG TGAA TATCGC TTTTGCTAATGAATT rffD 4457252 - 4458514 + | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase TERM 6016 4459036 - 4459006 - g 74 -7.5 -4.07885 | gap 1, opp_overlap 4459023 4459032 4459033 TATTCCGCTTCAAAA GCCAGCAGCG-ACC ATCT GGTACGCGCCTGGC TGCGGACCTATGGTC rffG 4458514 - 4459581 + | dTDP-glucose 4,6-dehydratase TERM 6017 4459852 - 4459866 + G 72 -7.8 -3.97947 | opp_overlap 4459830 4459839 CAGCCCAGTCCGGAC GGTCTG GCG CAGGCC TTTATCATCGGTGAA rffH 4459600 - 4460481 + | glucose-1-phosphate thymidylyltransferase TERM 6018 4460858 - 4460845 - g 76 -8.1 -4.19258 | opp_overlap 4460848 4460849 ACAGTGGATTGAAAA TGCCG TGCG CGGCA CCTTTGATCATCAAT rffC 4460459 - 4461133 + | TDP-fucosamine acetyltransferase TERM 6019 4461237 - 4461265 + G 81 -9.6 -4.07568 | gap 1, opp_overlap 4461264, overlap 4461264 GATGGCGGTTTTACC CGTCGCTGCCAGC AGTG GCTGG-AGCAACG TTTTGGCAGCGCCAA rffA 4461138 - 4462268 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 6020 4462384 - 4462404 + G 76 -11.1 -3.36289 | CCGGCGGGGCTTGGG CTGGCGGCA AAT TTCCGCCAG TTGATTACCGTGCTC wzxE 4462270 - 4463520 + | O-antigen translocase TERM 6021 4463569 - 4463579 + G 70 -4.6 -4.56597 | overlap 4463541 CTCACCATAACCGAA CCGT TCT GCGG TTTTTCAACGACGCG TERM 6022 4463790 - 4463825 + G 72 -6.8 -4.27617 | overlap 4463820 AATCCCACACTGTGG CTGGCTCTGCTGAGTG GTGG CATTAAGCCCAGCCAG TTTTACTGGCATATC TERM 6023 4463872 - 4463886 + G 71 -2.1 -5.02074 | ACGAGCTTTCCAGTG GCTTG AGATA TAAGC TTTTTTACCCACTAC rffT 4463517 - 4464596 + | TDP-Fuc4NAc:lipidIIFuc4NAc transferase TERM 6024 4465058 - 4465075 + G 71 -3.3 -4.80167 | overlap 4465061 AGTGAAGTCTCCGGC GTGGCGT TAAA ACGCTTC TTTTACTTTTTCATC TERM 6025 4465061 - 4465072 + G 74 -5.8 -4.47007 | overlap 4465058 GAAGTCTCCGGCGTG GCGT TAAA ACGC TTCTTTTACTTTTTC TERM 6026 4465126 - 4465141 + G 71 -3.2 -4.77036 | CTTTCTGCGCCAGGA CAGCAA AGCG TGGCTG TTTTTCCTCGTCAGC wzyE 4464593 - 4465945 + | putative Wzy protein involved in ECA polysaccharide chain elongation rffM 4465948 - 4466688 + | UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 6027 4466702 - 4466738 + F 79 -2.5 -5.4505 | gap 3, opp_overlap 4466707, overlap 4466700 4466702 4466704 4466706 GATTTTCCTCTCTTT GTA-A-AG-CGACGGAGT GGTC ACTCCGTCGCCTGTCTGC TTTTTTATTACACAA TERM 6028 4466702 - 4466735 + F 75 -9.5 -3.5087 | opp_overlap 4466707, overlap 4466700 4466702 4466704 4466706 GATTTTCCTCTCTTT GTAAAGCGACGGAGT GGTC ACTCCGTCGCCTGTC TGCTTTTTTATTACA TERM 6029 4466704 - 4466733 + F 80 -10.7 -3.30867 | opp_overlap 4466707, overlap 4466702 4466700 4466702 4466706 TTTTCCTCTCTTTGT AAAGCGACGGAGT GGTC ACTCCGTCGCCTG TCTGCTTTTTTATTA TERM 6030 4466706 - 4466731 + F 91 -13.3 -3.18764 | opp_overlap 4466707, overlap 4466704 4466702 4466700 4466702 TTCCTCTCTTTGTAA AGCGACGGAGT GGTC ACTCCGTCGCC TGTCTGCTTTTTTAT TERM 6031 4466730 - 4466707 - f 100 -16.8 -3.53012 | opp_overlap 4466706 4466704 4466702 4466700 4466702 TCCTCTCTTTGTAAA GCGACGGAGT GGTC ACTCCGTCGC CTGTCTGCTTTTTTA TERM 6032 4466850 - 4466838 - f 75 -9.1 -3.57039 | TACCCATAACGATAA CCGGT AAC ACCGG AAAGCATGCAAACAC TERM 6033 4467205 - 4467215 + G 77 -8.2 -4.06892 | opp_overlap 4467204 4467201 GATCTCAGAAATCAC CGCC ATT GGCG TTTATGTCCAGTTCT TERM 6034 4467371 - 4467351 - g 71 -10.5 -2.87051 | opp_overlap 4467351, overlap 4467350 TCGCGATGATCAAAG TCACCACGA TTA TCGTGATGA TTGTCATTGGCCTGG TERM 6035 4467842 - 4467826 - g 93 -10.1 -4.58395 | CGCACTGGCGAAAAA CCGTCAG TTA CCGACGG CGATGGCGAAAGTTT yifK 4466879 - 4468264 + | putative amino acid transporter TERM 6036 4468812 - 4468827 + F 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT aslB 4468950 - 4470185 + | regulator of arylsulfatase activity TERM 6037 4470208 - 4470190 - T 100 -11.7 -5.37865 | TGAATAAGTAAAAAA GCGGCCA TTTTG TGGCCGC CTGCGGTTGATTGCC aslA 4471942 - 4470287 - | arylsulfatase-like enzyme TERM 6038 4471684 - 4471698 + g 100 -3.5 -5.63504 | overlap 4471685 AGAAAACAACCACGT TCGGT TTTTT ACCGG TTTTTTTCTCAAGTT TERM 6039 4471716 - 4471731 + g 72 -4.6 -4.70921 | overlap 4471717 TTTTTCTCAAGTTCT GCCAGC TTCT GCTGGG TTTCTTTGTCTTGTG TERM 6040 4472541 - 4472566 + r 100 -11.9 -5.76633 | ACAGACCTGTTTTAA CGCCTGCTC CGTAATAA GAGCAGGCG TTTTTTTATGTATCA hemY 4473817 - 4472621 - | putative protoheme IX synthesis protein TERM 6041 4472660 - 4472680 + g 88 -12.5 -3.66028 | opp_overlap 4472658 4472659 CGTTAACATCAAACC GTCGCGGCG CAT CGCTGCGGC TTCTTCCGGCTTGTG hemX 4475031 - 4473820 - | putative uroporphyrinogen III methylase TERM 6042 4474777 - 4474788 + g 70 -3.6 -4.62336 | CAGCTCGGCTTTTTG GCTC TCCT GGGC TTTTTGCAATGCCGT hemD 4475793 - 4475053 - | uroporphyrinogen III synthase hemC 4476731 - 4475790 - | hydroxymethylbilane synthase TERM 6043 4479280 - 4479260 - g 75 -6.8 -4.30987 | overlap 4479256 ATTTCGCATAACAAA CTGCACGG CCTGT CAGTGCAG GTTGAAACCAATCAC cyaA 4477118 - 4479664 + | adenylate cyclase cyaY 4480024 - 4479704 - | frataxin, iron-binding and oxidizing protein TERM 6044 4480674 - 4480651 - g 71 -3 -4.82901 | gap 1, opp_overlap 4480661, overlap 4480652 GGTGCCGGATAAAAA CGACC-GCGCC ACT GGCGATGGTCC ATCCCAGGTGAATTA yifL 4480490 - 4480693 + | putative lipoprotein TERM 6045 4480942 - 4480966 + G 77 -10 -3.67737 | gap 1, opp_overlap 4480937, overlap 4480940 TGGCAGTGAAGTGGC GCAGTGCG-GC AACG GCGCGCGCTGC TTTGCCCGTTTTGTG dapF 4480730 - 4481554 + | diaminopimelate epimerase TERM 6046 4481669 - 4481706 + G 74 -10.6 -3.16564 | gap 1, opp_overlap 4481672, overlap 4481674 CGCGCGCAGTTGAAG CGATACGTGTGCCGCAT CCGGT ACGCGGCAC-CGTTTCG TTGGTCGAATGGCAC TERM 6047 4481674 - 4481701 + G 72 -7.7 -3.95852 | gap 1, opp_overlap 4481672, overlap 4481669 GCAGTTGAAGCGATA CGTGTGCCGCAT CCGGT ACGCGGCAC-CG TTTCGTTGGTCGAAT TERM 6048 4481782 - 4481805 + G 72 -5.2 -4.48221 | overlap 4481767 4481777 4481774 GCGCTGTTGATGGAA CAGGCTATTG CCAA CGAAGGCCTG TTTTATCGCTTACTC yigA 4481551 - 4482258 + | hypothetical protein TERM 6049 4482606 - 4482593 - g 77 -6.7 -4.57569 | TCATCTGCCGAAAAA CATCG ACGT CGATG ATATGAATCGGCTGC TERM 6050 4482839 - 4482870 + G 79 -5 -4.96848 | overlap 4482810 4482868 GCACTGGCTTGATTT GCGCGACCTGTTTG GTAG CGAAGACGACGCGC TTTTTCTGTCGAAAC xerC 4482255 - 4483151 + | site-specific tyrosine recombinase yigB 4483151 - 4483867 + | putative hydrolase TERM 6051 4484018 - 4483990 - g 83 -10.1 -4.05714 | opp_overlap 4484001, overlap 4483992 AGCCTTAATGACAAA CAGCGCGAAGCGG TGG CCGCGCCACGCAG CAACCTTCTGGTGCT TERM 6052 4484016 - 4483992 - g 85 -11.3 -3.6217 | opp_overlap 4484001, overlap 4483990 CCTTAATGACAAACA GCGCGAAGCGG TGG CCGCGCCACGC AGCAACCTTCTGGTG TERM 6053 4484001 - 4484023 + G 71 -9 -3.44051 | opp_overlap 4483992 4483990 CAAACAGCGCGAAGC GGTGGCCGCG CCA CGCAGCAACC TTCTGGTGCTGGCGG uvrD 4483951 - 4486113 + | DNA-dependent ATPase I and helicase II TERM 6054 4486109 - 4486157 + T 100 -17.4 -3.34192 | overlap 4486110 CCCGGTTGGAGACGG TGTGACGTTGCGGGATGCGGTG CGCCA CACCGCATCCCGCATCAGCACC TTACTTAGCGCACTT TERM 6055 4486110 - 4486156 + T 100 -20.9 -2.60194 | overlap 4486109 CCGGTTGGAGACGGT GTGACGTTGCGGGATGCGGTG CGCCA CACCGCATCCCGCATCAGCAC CTTACTTAGCGCACT TERM 6056 4487040 - 4487050 + T 100 -3.2 -5.85011 | opp_overlap 4487025 CGTTAATAAAAATAA CGTT GCG AGCG TTTTTTTCATTTTTG yigE 4487907 - 4487143 - | hypothetical protein corA 4488277 - 4489227 + | magnesium/nickel/cobalt transporter TERM 6057 4489272 - 4489232 - T 77 -4.8 -5.00884 | gap 2, opp_overlap 4489238 4489239, overlap 4489233 4489235 4489237 ACTGGTTGTAAAAAA CGA-GAGC-GGTGGCTTAGC CTG GCTAAGCCACCTGTTATTCA AAGGCTCCAGGTATT TERM 6058 4489267 - 4489235 - T 71 -9.1 -3.37655 | opp_overlap 4489238 4489239, overlap 4489233 4489232 4489237 GGTTGTAAAAAACGA GAGCGGTGGCTTAGC CTG GCTAAGCCACCTGTT ATTCAAAGGCTCCAG TERM 6059 4489265 - 4489237 - T 83 -11.7 -3.25177 | opp_overlap 4489238 4489239, overlap 4489235 4489233 4489232 TTGTAAAAAACGAGA GCGGTGGCTTAGC CTG GCTAAGCCACCTG TTATTCAAAGGCTCC TERM 6060 4489238 - 4489265 + T 100 -15 -3.62046 | gap 1, opp_overlap 4489237 4489235 4489233 4489232, overlap 4489239 TGTAAAAAACGAGAG C-GGTGGCTTAGC CTG GCTAAGCCACCTG TTATTCAAAGGCTCC TERM 6061 4489239 - 4489263 + T 100 -18.7 -3.38991 | opp_overlap 4489237 4489235 4489233 4489232, overlap 4489238 GTAAAAAACGAGAGC GGTGGCTTAGC CTG GCTAAGCCACC TGTTATTCAAAGGCT yigF 4489650 - 4489270 - | conserved hypothetical protein; putative inner membrane protein yigG 4490044 - 4489664 - | conserved hypothetical protein; putative inner membrane protein TERM 6062 4490086 - 4490115 + r 93 -9.4 -5.04385 | opp_overlap 4490088, overlap 4490114 CTGTCAGCATGGCAA TATGCCCACTCT CATGCA AGAGTCGGCATA TTTTTTCAGAATATA rarD 4491029 - 4490139 - | putative chloramphenicol resistance permease TERM 6063 4490220 - 4490208 - G 72 -5.5 -4.46112 | opp_overlap 4490208 4490211 CGCCACCCAAATAAA GGCGA AGG TCACC ATCTTATCGGCACCC TERM 6064 4490227 - 4490237 + g 72 -4.6 -4.59773 | AAGGTCACCATCTTA TCGG CAC CCGG TTTTTCGCCATAAAA TERM 6065 4490323 - 4490301 - G 74 -2 -5.10497 | gap 1 AATGTACTGAAAAAA GCCTAACGT TGAGAG ACGC-AGGC GTGTCGCAGCCGCAG TERM 6066 4490474 - 4490456 - G 72 -8.8 -3.82208 | TAGCAAACAGGTAAA TCGCCGCC ACG GGCAGCAA CCACATAGTTTCGAT TERM 6067 4490925 - 4490892 - G 85 -3.1 -5.40464 | gap 1, overlap 4490900 CACCATAAAGAAAAA CGACCAGATCACG-CG ATG CGTCAGGATCTCATCG GCGGGCACGTAGTAA TERM 6068 4491015 - 4490980 - G 74 -3.2 -4.89521 | gap 1, opp_overlap 4490982 4490983, overlap 4490983 ATACCCCAAATAAAA TAAGCGGCAAGAGCG AGTAATA CGC-CCTGCCGCGTT TGTTTTGCATCCATC TERM 6069 4490982 - 4491013 + g 70 -3.6 -4.68908 | gap 1, opp_overlap 4490980 4490983, overlap 4490983 ACCCCAAATAAAATA AGCGGCAAGAGCG AGTAATA CGCCCT-GCCGCG TTTGTTTTGCATCCA TERM 6070 4491012 - 4490983 - G 90 -9.3 -4.54026 | gap 1, opp_overlap 4490983 4490982, overlap 4490980 CCCCAAATAAAATAA GCGGCAAGAGCG AGTAATA CGC-CCTGCCGC GTTTGTTTTGCATCC yigI 4491548 - 4491081 - | hypothetical protein pldA 4491713 - 4492582 + | outer membrane phospholipase A TERM 6071 4492666 - 4492687 + F 100 -12.3 -5.27335 | overlap 4492673 TTGCAGTTTCTCGCG CAGGCGCTG AAAA TAGCGCCTG TTTTTATTTCAGGCA TERM 6072 4493219 - 4493242 + G 74 -8.8 -3.87994 | overlap 4493215 4493214 GCCCTCGGTCAGCTG CGTCAGCGTT TTCC GACGCTGCCG TTTATGGCGCTGACT TERM 6073 4494345 - 4494329 - g 71 -9.5 -3.5394 | opp_overlap 4494328 AAACTGTTCGCCAAA TTACGCA AAC TGCGTAA ATCGATTGCCGATGA recQ 4492715 - 4494544 + | ATP-dependent DNA helicase rhtC 4494608 - 4495228 + | threonine efflux system TERM 6074 4495249 - 4495285 + T 87 -8.8 -4.58395 | gap 1, opp_overlap 4495252 4495261, overlap 4495252 GACGCGTCATCAGAG TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA TTTTTCACGCATGCC TERM 6075 4495281 - 4495252 - T 100 -14.3 -3.29471 | opp_overlap 4495249 4495252, overlap 4495261 GCGTCATCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA TERM 6076 4495252 - 4495281 + T 83 -12.1 -3.23855 | opp_overlap 4495252 4495261, overlap 4495249 GCGTCATCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTTCACGCA rhtB 4495910 - 4495290 - | neutral amino-acid efflux system TERM 6077 4496976 - 4496991 + G 74 -3.2 -5.00616 | opp_overlap 4496956 TGCGCTCAGTCGCGC TCCACG CTAT CGTTGA TTTTTTCAACAGGCA pldB 4496021 - 4497043 + | lysophospholipase L(2) yigL 4497051 - 4497851 + | putative hydrolase metR 4499667 - 4498714 - | DNA-binding transcriptional activator, homocysteine-binding yigM 4497927 - 4498826 + | conserved hypothetical protein; putative inner membrane protein TERM 6078 4499117 - 4499097 - Gf 72 -7.5 -3.89346 | opp_overlap 4499106, overlap 4499101 GCTGCACCGGATAAA TCAACAGCG TCT CGCTGGCGA GATCTTCCGGTGTAA TERM 6079 4499113 - 4499101 - Gf 75 -9.1 -3.61244 | opp_overlap 4499106, overlap 4499097 CACCGGATAAATCAA CAGCG TCT CGCTG GCGAGATCTTCCGGT TERM 6080 4499632 - 4499642 + gF 72 -6.8 -4.23434 | overlap 4499628 GCCGCAGTTCCGCAA CGCT TGT AGCG TTTTCAGGTGTTTTA TERM 6081 4500077 - 4500058 - g 75 -5.7 -4.71426 | gap 1 CTGGGATCAACAAAA GCAGG-CG GGTAT CGACCTGC TGCCGGTGGGCGATT TERM 6082 4501383 - 4501401 + G 71 -3 -4.78848 | overlap 4501384 4501385 4501397 ACATGGTGGAATACT TTGGCGAG CAC CTCGACGG TTTTGTCTTTACGCA TERM 6083 4502116 - 4502091 - g 74 -7.5 -4.07687 | overlap 4502109 ACTGTGGCCTGAAAA CGCGCGGCT GGCCAGAA ACCCGCGCG GCACTGGCGAACATG metE 4499903 - 4502164 + | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase TERM 6084 4502170 - 4502194 + T 100 -14.3 -4.5442 | opp_overlap 4502172, overlap 4502172 TCGGGGGTAAATCCA AACCGGGTGGT AAT ACCACCCGGTC TTTTCTCATTACAGC TERM 6085 4502172 - 4502192 + T 100 -16.9 -3.8823 | opp_overlap 4502172, overlap 4502170 GGGGGTAAATCCAAA CCGGGTGGT AAT ACCACCCGG TCTTTTCTCATTACA TERM 6086 4502192 - 4502172 - T 100 -16.9 -3.84451 | opp_overlap 4502170 4502172 GGGGGTAAATCCAAA CCGGGTGGT AAT ACCACCCGG TCTTTTCTCATTACA ysgA 4503018 - 4502203 - | putative hydrolase udp 4503280 - 4504041 + | uridine phosphorylase TERM 6087 4504061 - 4504077 + F 93 -9.4 -4.98672 | CTTCTCCTGTCTGAA GGCCGA CGCGT TCGGCC TTTTGTATTTTTGCG TERM 6088 4504797 - 4504783 - g 85 -7.1 -4.78839 | AAGGCGACAATAAAA CCCAG GGCAA CTGGG GCGAGGTAGTATTGA rmuC 4504182 - 4505609 + | recombination limiting protein ubiE 4505704 - 4506459 + | bifunctional 2-octaprenyl-6-methoxy-1, 4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase TERM 6089 4506619 - 4506641 + G 76 -10.6 -3.29471 | overlap 4506620 TTCGACGTCATTGAT TCTGGTGTTC AGC GAACGCCAGG TTGATGTACTGGGCG TERM 6090 4506620 - 4506640 + G 73 -11.9 -2.57468 | overlap 4506619 TCGACGTCATTGATT CTGGTGTTC AGC GAACGCCAG GTTGATGTACTGGGC yigP 4506473 - 4507078 + | hypothetical protein TERM 6091 4507194 - 4507157 - g 83 -9.9 -4.1196 | gap 1, opp_overlap 4507157 4507160 AACTGATCCCCAAAA TGCGTATCACCCT-GCCG CTA CGGCTATGGCGATACTCA TTATTCTGGATGCCA ubiB 4507075 - 4508715 + | 2-octaprenylphenol hydroxylase tatA 4508794 - 4509063 + | TatABCE protein translocation system subunit tatB 4509067 - 4509582 + | TatABCE protein translocation system subunit tatC 4509585 - 4510361 + | TatABCE protein translocation system subunit TERM 6092 4510388 - 4510363 - f 90 -8.9 -4.64024 | opp_overlap 4510365 4510368, overlap 4510364 4510365 4510368 AAACTAAAGAATAAA CTCAACCGCCC GTCA GGGCGGTTGTC ATATGGAGTTCAGGA TERM 6093 4510387 - 4510364 - f 90 -12.4 -3.35974 | opp_overlap 4510365 4510368, overlap 4510363 4510365 4510368 AACTAAAGAATAAAC TCAACCGCCC GTCA GGGCGGTTGT CATATGGAGTTCAGG TERM 6094 4510386 - 4510365 - f 100 -15.9 -2.59958 | opp_overlap 4510365 4510368, overlap 4510364 4510363 4510368 ACTAAAGAATAAACT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTTCAG TERM 6095 4510365 - 4510386 + F 100 -15.9 -2.64794 | opp_overlap 4510365 4510364 4510363 4510368, overlap 4510368 ACTAAAGAATAAACT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTTCAG TERM 6096 4510383 - 4510368 - f 88 -11.8 -3.42458 | opp_overlap 4510365 4510368, overlap 4510365 4510364 4510363 AAAGAATAAACTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTT TERM 6097 4510368 - 4510383 + F 88 -11.8 -3.47345 | opp_overlap 4510368 4510365 4510364 4510363, overlap 4510365 AAAGAATAAACTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTT tatD 4510403 - 4511185 + | DNase, magnesium-dependent rfaH 4511670 - 4511182 - | DNA-binding transcriptional antiterminator TERM 6098 4512249 - 4512237 - g 85 -3.3 -5.4505 | overlap 4512238 CCTGCCAACAAAAAA TCGTC TCT GGCGA TGACGTCGATCTCAA TERM 6099 4512467 - 4512485 + G 70 -6.6 -4.04206 | TGGTGTGCGGCGCAT CCGGGCGA ACG TTTCCCGG TTTCTGTGGCGCTGG ubiD 4511837 - 4513330 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 6100 4513335 - 4513323 - f 70 -6.2 -4.24123 | opp_overlap 4513323 4513322 4513318 TTAACAACGGTAAAA GCGC CTGAT GCGC GTTTGTTTTGCCCTA fre 4513376 - 4514077 + | flavin reductase TERM 6101 4514107 - 4514089 - T 100 -9.5 -5.4251 | CTGAGATATAAAAAA CCCGCCC CTGAC AGGCGGG AAGAACGGCAACTAA TERM 6102 4514176 - 4514209 + T 79 -11.7 -2.56596 | overlap 4514183 4514186 GCAATTGGTGCACGA TGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACATTGGTGCCGGA fadA 4515431 - 4514268 - | 3-ketoacyl-CoA thiolase (thiolase I) fadB 4517630 - 4515441 - | fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase TERM 6103 4517435 - 4517415 - G 79 -3.9 -5.09685 | overlap 4517416 GAACAGAGACAAAAA TTCGGTGAT ATC AGCACCGAC GATAAAGGCTGCTTT TERM 6104 4517748 - 4517726 - H 73 -4.8 -4.60648 | AAAATATTAAAGAAA TGCCGATC TGATCAC GCTCGGCA GAAATCACGCTCTGG pepQ 4517820 - 4519151 + | proline dipeptidase yigZ 4519151 - 4519765 + | putative elongation factor TERM 6105 4520044 - 4520063 + G 78 -5.6 -4.73682 | TTCTGGACCGTGCTG GGTAGCGT CGGT GCGCTCCC TTTTATCTTCTCGGA TERM 6106 4520981 - 4521000 + G 75 -5 -4.84761 | CACTGCCGGAACGTA TCCTCGAA GCCG TTTGGGGA TTTTTCTCCGCCTAT trkH 4519804 - 4521255 + | potassium transporter hemG 4521267 - 4521812 + | protoporphyrin oxidase, flavoprotein TERM 6107 4524055 - 4524018 - T 100 -6.3 -5.68438 | opp_overlap 4524020 4524035, overlap 4524020 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 6108 4524053 - 4524020 - T 88 -8.9 -4.47052 | opp_overlap 4524020 4524035, overlap 4524018 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 6109 4524020 - 4524053 + T 77 -6.7 -4.49756 | opp_overlap 4524020 4524018, overlap 4524035 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 6110 4524118 - 4524094 - T 72 -8 -3.93061 | gap 1, opp_overlap 4524101 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 6111 4524672 - 4524660 - T 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 6112 4525973 - 4525962 - T 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 6113 4527158 - 4527137 - T 76 -8.7 -3.91196 | opp_overlap 4527154 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAACAGAATTTGCC TERM 6114 4527304 - 4527323 + T 100 -13.6 -4.62069 | opp_overlap 4527304 TCAAATTAAGCAGAA GGCCATCC GTCA GGATGGCC TTTTTGCGCTGGAGC TERM 6115 4527323 - 4527304 - T 100 -13.6 -3.58914 | opp_overlap 4527304 TCAAATTAAGCAGAA GGCCATCC GTCA GGATGGCC TTTTTGCGCTGGAGC TERM 6116 4527337 - 4527389 + T 83 -11.2 -3.3854 | opp_overlap 4527346, overlap 4527341 CCTTTTTGCGCTGGA GCAGAAGAAGGCCGGATGCGACGC TGGCT GCGTCTGATCCAGCCTACTCTTGC TTATCCGTCCTGATT TERM 6117 4527380 - 4527346 - T 93 -12.1 -3.84406 | opp_overlap 4527341 4527337 GCTGGAGCAGAAGAA GGCCGGATGCGACGC TGGCT GCGTCTGATCCAGCC TACTCTTGCTTATCC mobB 4527902 - 4527390 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 6118 4527690 - 4527715 + g 79 -9.7 -3.85698 | overlap 4527703 4527703 TTCCGTCATCAAGGC CCATCGCTGCT GGCT GGCAACGATGG TTTGTGCCGCGCCAG TERM 6119 4527894 - 4527904 + g 71 -3.2 -4.7373 | GGCAAAGGCGAGTAA CGGT ATC ATCG TTTTTCCTGCCATCG mobA 4528483 - 4527899 - | molybdopterin-guanine dinucleotide synthase yihD 4528553 - 4528822 + | hypothetical protein TERM 6120 4529856 - 4529844 - g 72 -6.3 -4.31043 | ATAGAACAGGCAAAA GTTCT ACA AGAAC CCCCTTTGCAATTAA yihE 4528899 - 4529885 + | putative kinase TERM 6121 4530011 - 4530001 - g 77 -6.8 -4.58663 | opp_overlap 4529992 4530001, overlap 4530002 4530005 ACTACCCTGGAAAAA CCAG TTG CTGG CGCGCCGCAAGTGCT dsbA 4529902 - 4530528 + | periplasmic protein disulfide isomerase I TERM 6122 4530542 - 4530526 - f 77 -3.1 -5.24129 | overlap 4530534 CTGTCCGAGAAAAAA TAATTCA ATG TAAATTA CATAAAGCCCGTGAA TERM 6123 4530549 - 4530568 + F 100 -13.6 -6.01369 | opp_overlap 4530549 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 6124 4530568 - 4530549 - f 100 -13.6 -4.17516 | opp_overlap 4530549 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 6125 4530866 - 4530856 - g 76 -4 -4.91712 | opp_overlap 4530856 GTTAAGTTATAAAAA CTTT GAC AAAG GCTTTTTTAATTCTC TERM 6126 4531109 - 4531094 - g 71 -3.2 -4.85782 | GCCGCGAAAAATAAA TCGCCC GTGG AAGCGA CATTGCGATTCGCGT yihF 4530683 - 4532113 + | hypothetical protein TERM 6127 4532152 - 4532116 - T 82 -8.9 -4.25104 | gap 1, opp_overlap 4532116 4532117 4532147, overlap 4532118 4532119 TTTTGTTCATTAAAA TACTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA-A CTTACTTATTCTGAC TERM 6128 4532151 - 4532118 - T 100 -14 -3.73042 | opp_overlap 4532117 4532116 4532147, overlap 4532116 4532119 TTGTTCATTAAAATA CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA ACTTACTTATTCTGA TERM 6129 4532150 - 4532119 - T 93 -15.3 -2.83504 | opp_overlap 4532117 4532116 4532147, overlap 4532118 4532116 TGTTCATTAAAATAC TCACTCGCCTCTG CTCATT CAGAGGCGAGTAA AACTTACTTATTCTG yihG 4533086 - 4532154 - | putative endonuclease TERM 6130 4532660 - 4532623 - G 70 -6.3 -4.22554 | gap 1, overlap 4532647 TGACGTAATAAATAA GCGCGGGA-ATAACGCTT CAT AAACGGCATATCCAGCGC CCAGCATGCCAGGCC TERM 6131 4532929 - 4532914 - G 77 -3.2 -5.10601 | overlap 4532915 ATAAAATCACAAAAA CGCGAA ACCT TTCGCC AAATGACTGGCACAG TERM 6132 4533016 - 4532996 - G 90 -6.9 -5.1675 | overlap 4532999 GGACGGAGCAAAAAA TAGTGACCA AAA TGGTCAATA CGATACTCAGCAAAA TERM 6133 4533115 - 4533105 - H 72 -8.2 -3.9122 | overlap 4533092 CAGTGCGCTAAAGAA GCGC AAG GCGC AGATTTTAGCAGAAA TERM 6134 4533280 - 4533257 - H 76 -6.1 -4.56642 | overlap 4533259 AAAAACAAAGACAAA CATCATGCT GTAAAA AGCATGATA ATAAATTAAAAGCGA TERM 6135 4533844 - 4533831 - g 70 -3.7 -4.66833 | overlap 4533832 CGGGAAGCCGAAAAA GCCGG GCGT CCGGT GCTGATCAGCACTGG TERM 6136 4534078 - 4534048 - g 76 -3.8 -5.00616 | GCGTCGGTGAAAAAA CCGCGCAGGCATTG CTG CAAGGTCTTGGCGG ACTGGATACGCTGTA TERM 6137 4534377 - 4534359 - g 77 -10.2 -3.5936 | opp_overlap 4534374, overlap 4534351 GCTAAAGGGGCGAAA CCCGCAGC CAG GCCGCAGG AAACCAGTGTTGCAG TERM 6138 4535265 - 4535254 - g 81 -7.2 -4.64334 | AACCGCTGAAGAAAA CGCC GGGT GGCG CGCCGTCAACGTCGG polA 4533450 - 4536236 + | fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ; 3'->5' exonuclease TERM 6139 4536460 - 4536485 + T 100 -19.1 -5.4505 | opp_overlap 4536453 GCTGAATATTTTAGC CGCCCCAGTCA GTAA TGACTGGGGCG TTTTTTATTGGGCGA yihA 4537214 - 4536618 - | GTP-binding protein TERM 6140 4537195 - 4537162 - G 74 -8.1 -4.08692 | GAACGGCCTGCAAAA GCCACTTCAATTCCG GTAT CGGAAGGTAAGTGGC GAATATCAGGCGCAC TERM 6141 4537723 - 4537768 + H 100 -19.3 -3.69341 | opp_overlap 4537735, overlap 4537735 CGTTAAGGGTTATGA GTCAGGAAAAAAGGCGACAGA GTAA TCTGTCGCCTTTTTTCTTTGC TTGCTTTCTGTTAGA TERM 6142 4537756 - 4537735 - H 100 -14.5 -5.1675 | opp_overlap 4537723 4537735 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG TERM 6143 4537735 - 4537756 + H 100 -14.5 -5.72053 | opp_overlap 4537735, overlap 4537723 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG yihI 4537832 - 4538341 + | hypothetical protein TERM 6144 4538464 - 4538423 - f 72 -10.2 -2.91144 | overlap 4538420 4538425 4538446 4538448 TTATTCGTTAAACTA CAG-CGGTTGTCGCGGCGAC AAAA GTGGCTGCG-CAACCGGCTG ATGACCCGAAACGGG TERM 6145 4538503 - 4538446 - f 100 -14.2 -4.36914 | gap 3, overlap 4538425 4538423 4538420 4538448 GTCGCGGCGACAAAA GTGGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCCGC CAGAGACGCCATCGG TERM 6146 4538501 - 4538448 - f 93 -15.4 -2.52946 | gap 3, overlap 4538425 4538423 4538420 4538446 CGCGGCGACAAAAGT GGCTGC-GCA-ACCGGCTGATGACCCG AAA CGGG-CATCCGCCGGTACGCCGTAGCC GCCAGAGACGCCATC hemN 4538530 - 4539903 + | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent TERM 6147 4539948 - 4539912 - T 74 -10.3 -3.24735 | gap 1, opp_overlap 4539908, overlap 4539907 4539905 GATTTAAATAGTGAA TGGCGC-TTCGTTTAC AAAGTA GAAAACGAAAGCGCCA TCAATGTGCTGAGAA glnG 4541724 - 4540315 - | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator ; sigma54 interaction protein glnL 4542785 - 4541736 - | sensory histidine kinase in two-component regulatory system with GlnG TERM 6148 4542345 - 4542357 + g 75 -4.7 -4.83269 | opp_overlap 4542346, overlap 4542346 4542356 CGCCGCGCCACGTAA ACCGC CAA GCGGA TTTTTAATCTCATGT TERM 6149 4542897 - 4542880 - R 87 -7 -5.28176 | TTGACGGAGAAAAAA GCCCAT GCAGAG ATGGGC TGAAAGTTTCCACGG TERM 6150 4542942 - 4542921 - R 76 -8.6 -3.91911 | overlap 4542922 TCCACGGCAACTAAA TCCCGGCG TTGTTG CGCCGGGT AGTACAACTTCAACT TERM 6151 4542941 - 4542922 - R 80 -12.1 -2.94825 | overlap 4542921 CCACGGCAACTAAAT CCCGGCG TTGTTG CGCCGGG TAGTACAACTTCAAC glnA 4544368 - 4542959 - | glutamine synthetase TERM 6152 4543581 - 4543591 + g 70 -6.8 -4.13945 | CCGGAGCCGTTATCA CCGA ACA TCGG TTTTGGCATAAAGGT ECUMN_4394 4544648 - 4544502 - | hypothetical protein TERM 6153 4544592 - 4544538 - G 100 -14.7 -3.30443 | gap 1, opp_overlap 4544536 4544537 4544542 4544549, overlap 4544539 4544568 4544574 GCACCATGATATGAA TGTTGCACCAATATAGTGCTTCAATG GAAA CATT-AAGCACCATATTGGTGCAATG ACCTTTGGATAACCC TERM 6154 4544591 - 4544539 - G 100 -18.2 -2.57944 | gap 1, opp_overlap 4544536 4544537 4544542 4544549, overlap 4544538 4544568 4544574 CACCATGATATGAAT GTTGCACCAATATAGTGCTTCAATG GAAA CATT-AAGCACCATATTGGTGCAAT GACCTTTGGATAACC TERM 6155 4544588 - 4544574 - G 74 -10 -3.481 | opp_overlap 4544549 4544536 4544537, overlap 4544539 4544538 4544568 CAATGGAAACATTAA GCACCA TAT TGGTGC AATGACCTTTGGATA bipA 4544741 - 4546564 + | GTP-binding protein TERM 6156 4546588 - 4546605 + F 100 -11.3 -6.13 | opp_overlap 4546588 TTCAGTCATAAAAAA CCTGCCA TTGC TGGCAGG TTTTTTTTTACCTGT TERM 6157 4546605 - 4546588 - f 100 -11.3 -5.28176 | opp_overlap 4546588 TTCAGTCATAAAAAA CCTGCCA TTGC TGGCAGG TTTTTTTTTACCTGT TERM 6158 4547222 - 4547238 + G 72 -4.3 -4.63486 | opp_overlap 4547222 GAAACATATATTAAT CCTGAAG TTG CTCCGGG TTTTATTGAACAACT TERM 6159 4547328 - 4547318 - g 93 -4 -5.52986 | ACGGTAGTAAAAAAA TTGA TTT TCAA ACCCGTCAGAATGCC yihL 4546781 - 4547491 + | putative DNA-binding transcriptional regulator ECUMN_4398 4548910 - 4547864 - | transposase ORF B, IS3 family TERM 6160 4548423 - 4548437 + gT 71 -2.1 -4.93898 | TTCGGCAGACAGGTA TGTTC CTGAC GAGCA TTTTTGTACTGATGT TERM 6161 4548721 - 4548703 - GT 71 -8.9 -3.33087 | opp_overlap 4548695 AACAGAGGCTGACAA CTGAGTG GCTGT CACTCAG TCTGGCAACTATCGT ECUMN_4399 4549077 - 4548730 - | transposase ORF A, IS3 family TERM 6162 4549787 - 4549771 - H 79 -6.6 -4.68384 | ACGCAGTTAATAAAA CCATTC GATAT GAATGG TCGGTATCTTATTGC yihN 4549842 - 4551107 + | putative transporter TERM 6163 4551137 - 4551112 - T 74 -10.5 -3.16742 | opp_overlap 4551114 4551123 4551124 CTGAAGCTTGATTAA TGGCCGGAT GTGGCTTA ATCCGGCCA ACGGAAACCGTATCA TERM 6164 4551123 - 4551172 + T 72 -7.1 -4.08767 | opp_overlap 4551112 4551169, overlap 4551114 4551124 4551158 4551159 TTAATGGCCGGATGT GGCTTAATCCGGCCAACGG AAACCGTATCAA CCGTAGGCCGGATAAGGCG TTTTCGCCGCATCCG TERM 6165 4551124 - 4551171 + T 76 -10.6 -3.05046 | opp_overlap 4551112 4551169, overlap 4551114 4551123 4551158 4551159 TAATGGCCGGATGTG GCTTAATCCGGCCAACGG AAACCGTATCAA CCGTAGGCCGGATAAGGC GTTTTCGCCGCATCC TERM 6166 4551158 - 4551191 + T 70 -6.5 -4.18018 | opp_overlap 4551169, overlap 4551124 4551123 4551159 AACCGTATCAACCGT AGGCCGGATAAGGCG TTTT CGCCGCATCCGGCAG TTTTACATCAGAAGA TERM 6167 4551159 - 4551190 + T 73 -10 -3.10597 | opp_overlap 4551169, overlap 4551124 4551123 4551158 ACCGTATCAACCGTA GGCCGGATAAGGCG TTTT CGCCGCATCCGGCA GTTTTACATCAGAAG ompL 4551891 - 4551199 - | putative outer membrane porin L yihO 4553361 - 4551958 - | putative transporter TERM 6168 4552792 - 4552768 - G 74 -2.8 -4.98911 | overlap 4552770 CATCATAAAAATAAA GCCACCAATG GAGAA CATCAGTGCC GCGCAGGCATAACCG TERM 6169 4553294 - 4553312 + g 90 -7.4 -5.00884 | opp_overlap 4553292 AAATTCGAACCGACG TCGCCCAT GCC ATAGGCGA TTTTTTCCCGCAGAT TERM 6170 4553374 - 4553393 + r 91 -10 -4.67968 | opp_overlap 4553377 CATAATCACTCCTTA TAACGCCC CGCA GGGCGTTG TTTATTATTTATTCC TERM 6171 4553390 - 4553377 - R 74 -9.5 -3.30619 | opp_overlap 4553374 AATCACTCCTTATAA CGCCC CGCA GGGCG TTGTTTATTATTTAT yihP 4554808 - 4553402 - | putative transporter TERM 6172 4554284 - 4554338 + g 73 -4 -4.77036 | gap 1, opp_overlap 4554277, overlap 4554285 CGTACACAGCAGCAG GCCCAGCG-TAGCGCCGCCCTGACG CCATGC CGCCAGTGAGGCGCGCTCGTTGGGA TTTTTGGTGATGGCA yihQ 4556869 - 4554833 - | alpha-glucosidase yihR 4557985 - 4557074 - | putative aldose-1-epimerase TERM 6173 4558032 - 4557996 - R 83 -12.4 -3.06183 | opp_overlap 4557996 4558008, overlap 4557999 GGCACCTTTATTGAA TAACGACATACCCGGC ATGTA GCCTGATATGCCGTTA TTTCAGCTCAGTTAT TERM 6174 4558029 - 4557999 - R 77 -9.7 -3.67775 | opp_overlap 4557996 4558008, overlap 4557996 ACCTTTATTGAATAA CGACATACCCGGC ATGTA GCCTGATATGCCG TTATTTCAGCTCAGT yihS 4559285 - 4558044 - | putative glucosamine isomerase yihT 4560179 - 4559301 - | putative aldolase yihU 4561099 - 4560203 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 6175 4561736 - 4561702 - g 71 -2.6 -5.0133 | opp_overlap 4561706 GACGGTGCTAAAAAA GCCTTCACTCTGGCCC GGC AGGCGGGCGTGATGAC TGTTCTGGACGGGGA TERM 6176 4562128 - 4562141 + G 82 -2.4 -5.35222 | GGGATCCCTGACTGT GATC AAACCC GATC TTTTTTGTCACTTTT yihV 4561267 - 4562163 + | putative sugar kinase yihW 4562197 - 4562982 + | putative DNA-binding transcriptional regulator yihX 4563081 - 4563680 + | putative hydrolase rbn 4563674 - 4564546 + | conserved hypothetical protein; putative inner membrane protein dtd 4564543 - 4564980 + | D-tyr-tRNA(Tyr) deacylase TERM 6177 4565495 - 4565454 - g 70 -4.3 -4.46212 | gap 1, opp_overlap 4565456 TTTTTGATGATAAAA CCTGTCGCCACTCTGGATGA CAT TC-TGCATCGCGGCGACTGG TGCGCGCAGCTGCAA yiiD 4564977 - 4565966 + | putative acetyltransferase TERM 6178 4565972 - 4565997 + F 70 -7.5 -3.95036 | overlap 4565973 4565975 AGAAGAGTAGCTGAT GGAGAGGGGCG GTGC TGCCTCTCTCA TTCTTTCAGGTCATT TERM 6179 4565973 - 4565996 + F 75 -11 -2.96298 | overlap 4565972 4565975 GAAGAGTAGCTGATG GAGAGGGGCG GTGC TGCCTCTCTC ATTCTTTCAGGTCAT TERM 6180 4566609 - 4566599 - g 71 -2.4 -4.94811 | TTAAAAATAAAGAAA CCTC ACT GTGG AAACGCAAAGTACCA TERM 6181 4567389 - 4567362 - g 77 -5.8 -4.61482 | opp_overlap 4567362 4567367, overlap 4567366 TGTGCCAAAAAATAA TAAACCAAAAAC AATC ATTTTTGATTTA CGTTTTCTTAGTGCA ECUMN_4416 4566343 - 4568196 + | hypothetical protein ECUMN_4417 4568246 - 4568347 + | hypothetical protein TERM 6182 4568328 - 4568365 + F 86 -9.8 -4.34402 | opp_overlap 4568328 4568339 CACTAGCATTCAGAA CTCCTGTGAAAGCGGC ATAGTG GCCGCCTGTGCAGGAG TTTTGCTATGACCCG TERM 6183 4568442 - 4568423 - f 81 -2.1 -5.52986 | overlap 4568424 ATGCGATTAAAAAAA CTCATCG TCGCGC CGATGAT TGACGACAATGCTAG yiiE 4568892 - 4569110 + | putative transcriptional regulator yiiF 4569329 - 4569571 + | hypothetical protein TERM 6184 4569598 - 4569613 + T 76 -6.2 -4.45083 | overlap 4569594 TTTGGCTATTTGATA TCGATA TCCT TATCGA TTTTCTCAGTGTGAA fdhE 4570682 - 4569753 - | formate dehydrogenase formation protein TERM 6185 4570611 - 4570630 + g 70 -10.7 -2.71325 | opp_overlap 4570611, overlap 4570608 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG TERM 6186 4570630 - 4570611 - G 86 -10.7 -3.97307 | opp_overlap 4570611 4570608 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4571314 - 4570679 - | formate dehydrogenase-O, cytochrome b556 subunit fdoH 4572213 - 4571311 - | formate dehydrogenase-O, Fe-S subunit TERM 6187 4571622 - 4571633 + g 70 -5.8 -4.28018 | overlap 4571619 GCTCCGCCACGCGCT CGCT CGCC AGCG TTTTCATCGACTCTT TERM 6188 4572028 - 4572003 - G 73 -11.3 -2.78798 | gap 1, opp_overlap 4572003, overlap 4572002 4572005 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA TERM 6189 4572003 - 4572028 + g 85 -11.3 -3.61715 | gap 1, opp_overlap 4572002 4572003 4572005 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA fdoG 4575276 - 4572226 - | formate dehydrogenase-O, large subunit TERM 6190 4574820 - 4574830 + g 77 -8.2 -4.10657 | AGCGGTTAACAGTCA CGCC TTC GGCG TTTTGCGCAATGTAG fdhD 4575470 - 4576303 + | formate dehydrogenase formation protein TERM 6191 4576310 - 4576344 + F 100 -13.8 -3.5782 | opp_overlap 4576310, overlap 4576313 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 6192 4576344 - 4576310 - f 100 -11.6 -4.50193 | opp_overlap 4576310 4576313 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTGCAGGACTTA TTCATTTCGTGAATT TERM 6193 4576313 - 4576341 + F 86 -11.1 -3.91541 | opp_overlap 4576310, overlap 4576310 AATTAATTAAAATAA GTCCTGCGATATA TAT TAAATTGCAGGAC TTATTCATTTCGTGA TERM 6194 4576345 - 4576357 + F 73 -2.7 -5.14949 | AAATTGCAGGACTTA TTCAT TTC GTGAA TTTTATTATTTTATT TERM 6195 4577761 - 4577746 - g 84 -7.6 -4.66163 | opp_overlap 4577745 4577746 ATGGCGATTTAAAAA TCTACG GCGA CGTAGA ATTTAATATGGATGC ECUMN_4428 4577436 - 4578830 + | putative glycoporin TERM 6196 4578835 - 4578867 + T 77 -11.2 -2.71144 | opp_overlap 4578835 ACTTCTTCTGATGAA GGCGCGGTGCTGGA TATTT TCCGGCACCGCAAC TCATTAGGGCAGGTA TERM 6197 4578867 - 4578835 - T 81 -11.2 -3.14211 | opp_overlap 4578835 ACTTCTTCTGATGAA GGCGCGGTGCTGGA TATTT TCCGGCACCGCAAC TCATTAGGGCAGGTA yiiL 4579185 - 4578871 - | L-rhamnose mutarotase rhaD 4580019 - 4579195 - | rhamnulose-1-phosphate aldolase rhaA 4581361 - 4580102 - | L-rhamnose isomerase TERM 6198 4580593 - 4580577 - G 74 -10.1 -3.53444 | TCAGTCGGGTGGAAA TGCCCGG CGT CCAGGCA CAGCGCCGTCTGGCG rhaB 4582827 - 4581358 - | rhamnulokinase rhaS 4583115 - 4583951 + | DNA-binding transcriptional activator, L-rhamnose-binding rhaR 4583935 - 4584873 + | DNA-binding transcriptional activator, L-rhamnose-binding rhaT 4585904 - 4584870 - | L-rhamnose:proton symporter sodA 4586189 - 4586809 + | superoxide dismutase, Mn TERM 6199 4586889 - 4586863 - f 79 -5 -5.06451 | opp_overlap 4586867, overlap 4586867 TATCAGCTTAAAAAA TGAACCATCGCC AAC GGCGGTGGTTTT TTTGTGATCAATTTC TERM 6200 4586867 - 4586885 + F 100 -12.4 -5.67063 | opp_overlap 4586867 4586863 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 6201 4586885 - 4586867 - f 82 -10.2 -3.93769 | opp_overlap 4586867, overlap 4586863 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA kdgT 4587087 - 4588052 + | 2-keto-3-deoxy-D-gluconate transporter TERM 6202 4588076 - 4588099 + F 100 -13.2 -3.93038 | CCTTAATCCCCACAG CCGGATGAAC TAAC GTTCGTCCGG TTTGCTATTGAGCTC yiiM 4588201 - 4588875 + | hypothetical protein TERM 6203 4588913 - 4588899 - T 76 -10 -3.30124 | opp_overlap 4588902, overlap 4588902 GTGTAGGCCTGATAA GACGCT ATC AGCGTC GCATCAGGCATCCTG TERM 6204 4588973 - 4588989 + T 90 -12.3 -3.28712 | opp_overlap 4588972 4588973 TATCCTGCCTACAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC TERM 6205 4588989 - 4588973 - T 81 -12.3 -2.57344 | opp_overlap 4588973, overlap 4588972 TATCCTGCCTACAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC cpxA 4590353 - 4588980 - | sensory histidine kinase in two-component regulatory system with CpxR TERM 6206 4589637 - 4589627 - G 70 -6.8 -4.05389 | overlap 4589632 GAGAGATATCAGAAA GCAG ACG CTGC TGAGAGGTCATCATG cpxR 4591048 - 4590350 - | DNA-binding response regulator in two-component regulatory system with CpxA cpxP 4591198 - 4591698 + | periplasmic protein combats stress TERM 6207 4591739 - 4591757 + F 100 -14.6 -5.9873 | CACCATCCCTGTCTT CCCCCACA TGA TGTGGGGG TTTTTTTTATCCTCA TERM 6208 4592371 - 4592385 + G 72 -10 -3.30106 | overlap 4592370 4592368 4592378 GTCCTGGTACGGCTG GCATCG CGC CGATGC TCTGTTTGCATTGGG fieF 4591847 - 4592749 + | zinc transporter TERM 6209 4592988 - 4592958 - g 76 -11.1 -3.28712 | opp_overlap 4592983, overlap 4592983 TCGGTGTGTTGACAA GCGGCGGTGATGC GCCAG GCATGAACGCCGC AATTCGCGGGGTTGT TERM 6210 4593218 - 4593206 - g 77 -3.3 -5.15117 | GAAAACCTGAAAAAA CGTGG TAT CGACG CGCTGGTGGTTATCG TERM 6211 4593586 - 4593575 - g 93 -5.8 -5.22039 | overlap 4593577 4593578 GCGAAAGGTAAAAAA CACG CGAT CGTG GCGATTACCGAACAT pfkA 4592930 - 4593892 + | 6-phosphofructokinase I TERM 6212 4593974 - 4593948 - f 77 -5 -4.96646 | overlap 4593949 TGACAGAAGCAAAAA TGCCTGATGCGC TTC GCTTATCAGGCC TACATGAATTCTGCA TERM 6213 4593973 - 4593949 - f 72 -8.5 -3.56903 | overlap 4593948 GACAGAAGCAAAAAT GCCTGATGCGC TTC GCTTATCAGGC CTACATGAATTCTGC TERM 6214 4594078 - 4594094 + F 91 -9.4 -4.72272 | opp_overlap 4594075 4594078 TTGTCAGCAATATGA GGCGGA TTTCT TCCGCC TTTTTAATCCCCCAA TERM 6215 4594984 - 4594968 - g 84 -3.6 -5.24129 | overlap 4594970 4594979 GTGGTCGAGAAAAAA GGCACC AAAGA GGTGGC GGAAGCCTACCTGAA sbp 4594212 - 4595201 + | sulfate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 6216 4595224 - 4595246 + F 100 -6.9 -5.72622 | opp_overlap 4595224 AGGATAATTATCAAA CCCGGTGGT TTCTC GCGACCGGG TTTTTTATTTGTCAC cdh 4595308 - 4596063 + | CDP-diacylglycerol phosphotidylhydrolase TERM 6217 4596113 - 4596082 - T 72 -8.1 -3.94002 | gap 1, opp_overlap 4596085 4596086, overlap 4596086 GAGGAGTTAAGGAAA GTAA-GTGCCGGAT ATGAA ATCCGGCACCTTTC AGACTTAAGCCTGTT TERM 6218 4596085 - 4596109 + T 78 -10 -3.60792 | opp_overlap 4596082 4596086, overlap 4596086 GAGTTAAGGAAAGTA AGTGCCGGAT ATGAA ATCCGGCACC TTTCAGACTTAAGCC TERM 6219 4596086 - 4596108 + T 86 -13.5 -2.76261 | opp_overlap 4596082 4596086, overlap 4596085 AGTTAAGGAAAGTAA GTGCCGGAT ATGAA ATCCGGCAC CTTTCAGACTTAAGC TERM 6220 4596108 - 4596086 - T 100 -13.5 -3.6187 | opp_overlap 4596086 4596085, overlap 4596082 AGTTAAGGAAAGTAA GTGCCGGAT ATGAA ATCCGGCAC CTTTCAGACTTAAGC tpiA 4596885 - 4596118 - | triosephosphate isomerase yiiQ 4597592 - 4596993 - | hypothetical protein TERM 6221 4597585 - 4597572 - G 88 -2.3 -5.53436 | ACATAAGAGAAAAAA CAGCG TACA CCCTG GCTTCATTGACAGTA yiiR 4597693 - 4598133 + | conserved hypothetical protein; putative inner membrane protein TERM 6222 4598161 - 4598208 + F 100 -16 -2.84566 | gap 1, overlap 4598158 CTCTTACTGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAATGACAATACCCGGAAAA TCCTTCTGAACTCTT yiiS 4598345 - 4598644 + | hypothetical protein TERM 6223 4598863 - 4598841 - g 76 -10.8 -3.41024 | opp_overlap 4598835, overlap 4598836 4598839 CCCTGCAACAGAAGA TATTCTTCAA TTG TTGAAGAATA AGTCGGATAACAAGC TERM 6224 4598936 - 4598920 - g 70 -3.6 -4.66537 | overlap 4598915 4598922 TGGCCGAAGACAAAA CTGCGT ATTGA ACGCGG AGAAATGCCGGAAAC yiiT 4598671 - 4599099 + | stress-induced protein fpr 4599850 - 4599104 - | ferredoxin-NADP reductase TERM 6225 4599130 - 4599170 + g 72 -10.3 -3.41836 | overlap 4599128 GCTCCGCTGTCATAT GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC TCTTTCAGTAACTGT TERM 6226 4599926 - 4599905 - R 100 -13.1 -5.7946 | CTCCGAACAAAAAAA TTCCAGTCC CGAA GGACTGGAA GGCTCAATCGATCAA glpX 4600957 - 4599947 - | fructose 1,6-bisphosphatase II TERM 6227 4600850 - 4600868 + g 95 -9.5 -4.83169 | opp_overlap 4600837 4600836 ACGCATGGCGTTTAC CGCCGCG CCGTC CGCGGTG TTTTTATCGCCGCGT glpK 4602600 - 4601092 - | glycerol kinase TERM 6228 4601120 - 4601133 + g 74 -3.1 -5.02074 | gap 1, overlap 4601111 TCTTCCCACGCCATC GCGCGT TTG AC-CGC TTTTTTCCAGCCTGC TERM 6229 4601574 - 4601584 + g 72 -6.8 -4.25074 | opp_overlap 4601574, overlap 4601582 CCGGAACCACATATA CACC ATT GGTG TTTTGCACTTTGGTG glpF 4603468 - 4602623 - | glycerol facilitator TERM 6230 4604019 - 4604003 - g 74 -2.9 -5.01858 | GAAAGAAAAAAACAA CTCACTG TCG CAGGAAG TTCAAAATGCCCAGC yiiU 4603893 - 4604138 + | hypothetical protein TERM 6231 4604151 - 4604172 + T 91 -7.9 -5.28481 | overlap 4604154 TAATCTCTTCCACGC AGAGGCGCC GCAA GGCGCCTTA TTTTTTACTTCACTG TERM 6232 4604154 - 4604169 + T 100 -11.8 -4.72473 | overlap 4604151 TCTCTTCCACGCAGA GGCGCC GCAA GGCGCC TTATTTTTTACTTCA ECUMN_4457 4604893 - 4604177 - | hypothetical protein ECUMN_4458 4605612 - 4604926 - | hypothetical protein TERM 6233 4605406 - 4605416 + g 74 -2.4 -5.03409 | opp_overlap 4605406, overlap 4605394 AGTGCCGCGAATAAA GCTG CGG CTGC TTCTTTTTTTTATCG TERM 6234 4605639 - 4605623 - R 100 -10.9 -5.28176 | opp_overlap 4605623 TCCATGTATAAAAAA GGGGAAT TTA ATTCCCC TTTTAACGCATGGCA TERM 6235 4605623 - 4605639 + r 86 -10.9 -4.09685 | opp_overlap 4605623 TCCATGTATAAAAAA GGGGAAT TTA ATTCCCC TTTTAACGCATGGCA rraA 4606145 - 4605660 - | ribonuclease E (RNase E) inhibitor protein menA 4607164 - 4606238 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 6236 4607200 - 4607183 - R 93 -9.1 -5.06816 | opp_overlap 4607170, overlap 4607170 ACGCGCCAATAAAAA TGGGGCC TTTC AGCCCCA TCAAACAATGATGAA hslU 4608562 - 4607231 - | molecular chaperone and ATPase component of HslUV protease hslV 4609102 - 4608572 - | peptidase component of the HslUV protease TERM 6237 4609157 - 4609138 - R 100 -13.6 -4.05991 | overlap 4609125 4609131 AATACAGAGTACAAA CCCCGTAC AAAA GTACGGGG CATAATGCAATTATA ftsN 4610154 - 4609195 - | essential cell division protein TERM 6238 4609611 - 4609622 + g 70 -5.8 -4.21974 | overlap 4609621 GCGACGCACGCGTCT GCTG CTGC CAGC TTTGTTCAGTCGTAC TERM 6239 4609707 - 4609723 + g 70 -10.1 -3.23853 | overlap 4609698 4609705 GCTGTAGCGTTTGCT GACGCTG TTC CGGCGTC TGTTCATTCCACGGA cytR 4611271 - 4610246 - | DNA-binding transcriptional dual regulator priA 4613625 - 4611427 - | Primosome factor n' (replication factor Y) TERM 6240 4611921 - 4611908 - G 74 -8.1 -4.10453 | overlap 4611897 TAAAGCTGGGCAAAA CGCTC TGCC GAGCG AAAATCGGCAGAAAA TERM 6241 4612482 - 4612510 + g 76 -7.9 -4.29153 | CCGGACGCGCATTCC CCGCCCGACGCGT CAG GCGCAGCAGGCGG TATTTTTTCTGCTGG rpmE 4613828 - 4614040 + | 50S ribosomal subunit protein L31 TERM 6242 4614060 - 4614073 + T 100 -9.5 -5.64274 | opp_overlap 4614060 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA TERM 6243 4614073 - 4614060 - T 93 -9.5 -5.02074 | opp_overlap 4614060 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA yiiX 4614709 - 4614101 - | putative peptidoglycan peptidase TERM 6244 4614757 - 4614735 - R 100 -4.8 -5.64274 | gap 1, opp_overlap 4614735 CCATGTATAAAAAAA GCGGCA-GG TTAACT CCGCGCCGC TCTTTTCCGCTTTAG metJ 4615224 - 4614769 - | DNA-binding transcriptional repressor, S-adenosylmethionine-binding metB 4615363 - 4616523 + | cystathionine gamma-synthase, PLP-dependent TERM 6245 4618258 - 4618245 - g 76 -8.1 -4.1711 | ATCAGTGCCAACAAA CTGGC AGGA GCCAG CGACAGCAATAAATA metL 4616526 - 4618958 + | fused aspartokinase II ; homoserine dehydrogenase II ECUMN_4471 4620052 - 4618922 - | hypothetical protein TERM 6246 4618974 - 4619032 + g 70 -6.8 -4.0371 | gap 2, opp_overlap 4618975 4618976 4618978, overlap 4618976 4618981 TCCTGAGTCAGAGAA -AG-CAGTATTTGCGTAACGCGCCCTGC GGAAA GCGGGGCGCTGTGCGTAAATTCTGTCTG TTTATGTAGCCAGTC TERM 6247 4618976 - 4619028 + g 100 -15.6 -3.38294 | opp_overlap 4618975 4618976 4618978, overlap 4618974 4618981 CTGAGTCAGAGAAAG CAGTATTTGCGTAACGCGCCCTGC GGAAA GCGGGGCGCTGTGCGTAAATTCTG TCTGTTTATGTAGCC TERM 6248 4618981 - 4619023 + g 91 -12.7 -3.74615 | opp_overlap 4618978 4618976 4618975, overlap 4618976 4618974 TCAGAGAAAGCAGTA TTTGCGTAACGCGCCCTGC GGAAA GCGGGGCGCTGTGCGTAAA TTCTGTCTGTTTATG TERM 6249 4619731 - 4619746 + g 77 -3.2 -5.09426 | TTTCTTTCTGATATT GTTTGG GTGT CCATAC TTTTTTGCAGTTACG ECUMN_4472 4620185 - 4621738 + | putative phosphoesterase metF 4622120 - 4623010 + | 5,10-methylenetetrahydrofolate reductase katG 4623339 - 4625519 + | catalase/hydroperoxidase HPI(I) TERM 6250 4625529 - 4625560 + F 100 -23.2 -4.41616 | CTGTAATCTGACCTT CTTCAGCGACTGCC TGAT GGCAGTCGCTGAAG TTTCTTTACCGGCGT TERM 6251 4626008 - 4626019 + G 77 -7.2 -4.53398 | TTCGCGATACTGATT GCCG CTTT CGGC TTATTTTTGGTGTTG yijE 4625612 - 4626517 + | putative permease yijF 4627161 - 4626544 - | hypothetical protein TERM 6252 4627448 - 4627491 + r 83 -10.6 -3.65201 | gap 3, opp_overlap 4627462, overlap 4627452 4627454 4627462 GAGTGAGCCACTTTG CCTGCACTCTCAAACTCCCGG ACAAG CCGGGAGTTTG-GAGT--AGG TTATTCCCACTCTTG TERM 6253 4627452 - 4627490 + r 85 -13.4 -2.78639 | opp_overlap 4627462, overlap 4627448 4627454 4627462 GAGCCACTTTGCCTG C-ACTCTCAAACTCCCGG ACAAG CCGGGAGTTTG-GAGTAG GTTATTCCCACTCTT TERM 6254 4627454 - 4627487 + r 100 -16.2 -2.65808 | gap 1, opp_overlap 4627462, overlap 4627452 4627448 4627462 GCCACTTTGCCTGCA CTCTCAAACTCCCGG ACAAG CCGGGAGTTTG-GAG TAGGTTATTCCCACT TERM 6255 4627480 - 4627462 - R 89 -11.7 -3.57144 | opp_overlap 4627454 4627452 4627448 4627462 GCCTGCACTCTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT TERM 6256 4627462 - 4627480 + r 89 -11.7 -3.62418 | opp_overlap 4627462, overlap 4627454 4627452 4627448 GCCTGCACTCTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT gldA 4628595 - 4627492 - | glycerol dehydrogenase, NAD fsaB 4629268 - 4628606 - | fructose-6-phosphate aldolase 2 TERM 6257 4628783 - 4628771 - G 71 -9.1 -3.53091 | opp_overlap 4628778 ACGCGGCGTTTTAAA GCTGG CCG CCAGC ACCATGCTTTCTGGT ptsA 4631781 - 4629280 - | fused putative PTS enzymes: Hpr component ; enzyme I component ; enzyme IIA component TERM 6258 4630217 - 4630230 + g 87 -4.5 -5.27335 | overlap 4630218 TTACGCAGTTGCTGT TTGGC TTCC GCCAG TTTTTCTTTCACCCA TERM 6259 4630270 - 4630249 - G 80 -11.7 -3.35679 | overlap 4630267 TTCTTTCACCCATAA GATCTCTTC CATT GAAGAGATC ATCGGGATCATGATT TERM 6260 4631625 - 4631636 + g 72 -7.2 -4.19506 | opp_overlap 4631625 TGTCGGTGCCAATCA GCGC AAGG GCGC TTTTGGCGTTGCCCT frwC 4632090 - 4633169 + | enzyme IIC component of PTS frwB 4633184 - 4633504 + | putative enzyme IIB component of PTS TERM 6261 4633513 - 4633530 + F 95 -14.1 -3.27525 | overlap 4633508 CGCTTAAGTTCTTAT CCCGCCC GTAA GGGCGGG TTCGCTTTCCCACAG TERM 6262 4634286 - 4634301 + GF 77 -9 -3.8512 | opp_overlap 4634275 4634274 TAAGCCGCAGACGTT CTGGCA GGCG TGCCAG TTATTCTGGTACATG pflD 4633555 - 4635852 + | putative formate acetyltransferase 2 (pyruvate formate lyase II) TERM 6263 4635862 - 4635887 + GF 70 -6.7 -4.14392 | opp_overlap 4635864, overlap 4635863 CTGTAACGTTGTGGA AACGCGCCGCA ATGA TGTGGCGCGCA TTTTCAACATTCAGC TERM 6264 4635863 - 4635886 + GF 73 -10.2 -3.08314 | opp_overlap 4635864, overlap 4635862 TGTAACGTTGTGGAA ACGCGCCGCA ATGA TGTGGCGCGC ATTTTCAACATTCAG TERM 6265 4635885 - 4635864 - gf 85 -11.5 -3.54459 | opp_overlap 4635863 4635862 GTAACGTTGTGGAAA CGCGCCGCA ATGA TGTGGCGCG CATTTTCAACATTCA pflC 4635818 - 4636696 + | pyruvate formate lyase II activase frwD 4636698 - 4637039 + | enzyme IIB component of PTS yijO 4637877 - 4637026 - | putative DNA-binding transcriptional regulator TERM 6266 4637951 - 4637931 - R 91 -7.6 -5.1861 | gap 1, overlap 4637915 GGCATTATTAAAAAA GGCCAC-CT GAAA AGTGTGGCC TGAGGGGAGTTCGAT TERM 6267 4638062 - 4638018 - R 100 -15.1 -3.53811 | opp_overlap 4638010 4638041, overlap 4638059 CGGATGCGGCGTAAA CGCCTTATCCTGCCTACCG CCGCGAT CTGTAGGCCGGATAAGACG CGTCAAGCGTCGCAT yijP 4639836 - 4638103 - | conserved hypothetical protein; putative inner membrane protein TERM 6268 4639784 - 4639768 - G 75 -4.3 -4.84033 | opp_overlap 4639778, overlap 4639771 AGAGAAAAACCAAAA GTAGAGC AGT GCCCAAC CCAGGGCTTTCCAGC TERM 6269 4639980 - 4640001 + r 85 -11.5 -3.53012 | opp_overlap 4639980 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGGAGGGGAA TERM 6270 4640001 - 4639980 - R 100 -13.7 -4.41206 | opp_overlap 4639980 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGGAGGGGAA ppc 4642670 - 4640019 - | phosphoenolpyruvate carboxylase argE 4644233 - 4643082 - | acetylornithine deacetylase TERM 6271 4644311 - 4644293 - H 71 -2.4 -5.14163 | ATTTATGAATAAAAA TACACTAA CGT TGAGCGTA ATAAAACCCACCAGC argC 4644387 - 4645391 + | N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding TERM 6272 4645671 - 4645658 - g 71 -2.3 -4.90525 | GAACGGCAAATAAAA CCCTG CTGG CATGG GCGAAGAAACATCAG argB 4645402 - 4646175 + | acetylglutamate kinase TERM 6273 4647469 - 4647447 - g 72 -10.6 -3.03635 | opp_overlap 4647445, overlap 4647436 CAAACCGCTGGAAGA TCTGCCACTC AGT GAGTTGCAGA AATTCAGTCAGGTGA argH 4646236 - 4647609 + | argininosuccinate lyase TERM 6274 4647634 - 4647652 + F 100 -9.5 -5.24129 | TATGTACAAATTTGA GCCTGGC TTATC GCCGGGC TTTTTTATGGCAAAA TERM 6275 4647690 - 4647672 - f 100 -11 -5.78622 | TTATGGCAAAAAAAA GCGGATCC TGG AGATCCGC AAAAGTTCACGTTGG oxyR 4647876 - 4648793 + | DNA-binding transcriptional dual regulator sthA 4650176 - 4648776 - | pyridine nucleotide transhydrogenase, soluble TERM 6276 4650556 - 4650542 - g 100 -2.7 -6.01725 | opp_overlap 4650551 AACAAAAAGAAAAAA CCCGC CGTTC GCTGG TGGAAGCCGCATTTA TERM 6277 4651138 - 4651124 - g 73 -4.2 -4.79752 | GTGAACAAGAGAAAA CCGCAA TTA TTCCGG GAAATGTGAAGGACG fabR 4650454 - 4651158 + | DNA-binding transcriptional repressor TERM 6278 4651353 - 4651366 + G 73 -3.7 -4.77567 | GTAGGCTTGCCGGGT CTGGC TGCT GCCTG TTTTATTCTCGGCGT yijD 4651158 - 4651517 + | conserved hypothetical protein; putative inner membrane protein TERM 6279 4651523 - 4651554 + T 100 -15.2 -4.41494 | opp_overlap 4651518 4651527, overlap 4651524 4651525 TGCTGAGTAATCGGA ATCATGCCGGATGC TGAT GCATCCGGCATGGG TTTTACTTCGCGGTC TERM 6280 4651524 - 4651553 + T 100 -18.7 -3.24414 | opp_overlap 4651518 4651527, overlap 4651523 4651525 GCTGAGTAATCGGAA TCATGCCGGATGC TGAT GCATCCGGCATGG GTTTTACTTCGCGGT TERM 6281 4651525 - 4651552 + T 100 -20 -2.54166 | opp_overlap 4651518 4651527, overlap 4651524 4651523 CTGAGTAATCGGAAT CATGCCGGATGC TGAT GCATCCGGCATG GGTTTTACTTCGCGG TERM 6282 4651550 - 4651527 - T 100 -16.8 -2.75957 | opp_overlap 4651525 4651524 4651523, overlap 4651518 GAGTAATCGGAATCA TGCCGGATGC TGAT GCATCCGGCA TGGGTTTTACTTCGC trmA 4652657 - 4651557 - | tRNA (uracil-5-)-methyltransferase TERM 6283 4651621 - 4651648 + g 82 -12 -3.45839 | opp_overlap 4651619 4651617 4651621, overlap 4651617 AACTGATCAAACAGA GCCAGACGTTCA ACCT TGTGCGTCTGGC TTAATGTTTCCAGAT TERM 6284 4651648 - 4651621 - G 72 -9.8 -3.3082 | opp_overlap 4651621 4651617, overlap 4651619 4651617 AACTGATCAAACAGA GCCAGACGTTCA ACCT TGTGCGTCTGGC TTAATGTTTCCAGAT TERM 6285 4653489 - 4653471 - gH 71 -9.6 -3.01712 | GCGGGGTGGTGAATA TCATCACG ACG CGCGATGA ACCCGGAACGGAAAT btuB 4653026 - 4654870 + | vitamin B12/cobalamin outer membrane transporter TERM 6286 4654878 - 4654913 + GF 100 -14 -3.41125 | gap 1, opp_overlap 4654875, overlap 4654880 CCTTCTGAACCACGT CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG TTGTCGGTCTATGAC TERM 6287 4655613 - 4655661 + GF 85 -10.4 -4.18094 | gap 1, opp_overlap 4655610 4655613, overlap 4655614 GAAGCTGAACAATTA TTGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCAG TTTTAGGCTGATTTG TERM 6288 4655614 - 4655660 + GF 81 -11.7 -3.10134 | gap 1, opp_overlap 4655613 4655610, overlap 4655613 AAGCTGAACAATTAT TGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCA GTTTTAGGCTGATTT murI 4654803 - 4655672 + | glutamate racemase TERM 6289 4657656 - 4657643 - f 74 -6.7 -4.41177 | overlap 4657647 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 6290 4657882 - 4657858 - f 72 -8 -3.93061 | gap 1, opp_overlap 4657865 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 6291 4658436 - 4658424 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 6292 4659738 - 4659727 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 6293 4661068 - 4661102 + F 82 -12.3 -2.92102 | gap 1, opp_overlap 4661074, overlap 4661074 CAGGCATCAAATTTA GCAGAA-GGCTCAGTC GGAA GACTGGGCCTTTTTGC GTTTCTACAAACTCT TERM 6294 4661074 - 4661095 + F 100 -12.3 -4.84529 | opp_overlap 4661074, overlap 4661068 TCAAATTTAGCAGAA GGCTCAGTC GGAA GACTGGGCC TTTTTGCGTTTCTAC TERM 6295 4661095 - 4661074 - f 77 -10.1 -3.45776 | opp_overlap 4661074 4661068 TCAAATTTAGCAGAA GGCTCAGTC GGAA GACTGGGCC TTTTTGCGTTTCTAC murB 4661194 - 4662222 + | UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding TERM 6296 4662587 - 4662608 + G 74 -8.7 -3.90766 | opp_overlap 4662586, overlap 4662577 CCGGGGTCGGAAATG GTTTTCGCC TTTT GGCGCAAAC TTATATTTGTCGATG birA 4662219 - 4663184 + | bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding TERM 6297 4663208 - 4663187 - T 80 -10.1 -3.80746 | overlap 4663185 4663189 TGCGGAAAAATAAGA TAGGGGAGC ATTA GCTCCCCTG AAAATTATTTGCGTA TERM 6298 4663206 - 4663189 - T 93 -12.7 -3.47868 | overlap 4663187 4663185 CGGAAAAATAAGATA GGGGAGC ATTA GCTCCCC TGAAAATTATTTGCG coaA 4664163 - 4663213 - | pantothenate kinase TERM 6299 4664765 - 4664753 - H 74 -7.7 -4.15222 | opp_overlap 4664749 ACCGGCTCGAATAAA GAGAG CTT CTCTC GATATTCAGTGCAGA TERM 6300 4665127 - 4665111 - g 70 -4.4 -4.4715 | gap 1, opp_overlap 4665111 TTTGAACGTACAAAA CCGCACG TTAA CGT-CGG TACTATCGGCCACGT tufB 4665081 - 4666265 + | protein chain elongation factor EF-Tu (duplicate of tufA) TERM 6301 4666329 - 4666288 - f 89 -14.5 -3.0792 | opp_overlap 4666289 4666300, overlap 4666300 TAACATTTGACGCAA TGCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGCT TTCGTACCAGAACCT TERM 6302 4666289 - 4666328 + F 100 -13.6 -3.72576 | opp_overlap 4666288 4666300, overlap 4666300 AACATTTGACGCAAT GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC TTTCGTACCAGAACC TERM 6303 4666317 - 4666300 - f 93 -11.3 -4.2679 | opp_overlap 4666300 4666289, overlap 4666288 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 6304 4666300 - 4666317 + F 100 -11.3 -4.60924 | opp_overlap 4666288 4666300, overlap 4666289 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 6305 4666698 - 4666687 - g 70 -4.4 -4.5442 | opp_overlap 4666687 CTGTTAACGACAAAA GGTA AAGC TACC GTTGCTTTTGCCCGT TERM 6306 4666787 - 4666801 + G 73 -11.4 -2.65264 | CCACGCTGATTGTGG CTGCGG TTA CCGCAG TAATGTCACTGATCC secE 4666495 - 4666878 + | preprotein translocase membrane subunit nusG 4666880 - 4667425 + | transcription termination factor TERM 6307 4667460 - 4667442 - f 73 -3 -5.1675 | CCAGCGATCAAAAAA GCGGCGAT TTA ATCGTTGC ACAAGGCGCGAGATT TERM 6308 4667460 - 4667498 + F 100 -16.9 -4.8543 | opp_overlap 4667465, overlap 4667465 4667497 GCGATTTAATCGTTG CACAAGGCGCGAGATTG GAATA CAATTTCGCGCCTTTTG TTTTTATGGGCCTTG TERM 6309 4667465 - 4667493 + F 100 -15.4 -5.35224 | opp_overlap 4667465, overlap 4667460 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 6310 4667493 - 4667465 - f 95 -13.2 -3.30159 | opp_overlap 4667465 4667460 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 6311 4667497 - 4667525 + F 95 -7.5 -5.36441 | overlap 4667460 4667499 4667500 CAATTTCGCGCCTTT TGTTTTTATGGGC CTT GCCCGTAAAACTA TTTTTTATATCACGG TERM 6312 4667499 - 4667523 + F 79 -7.9 -4.31943 | overlap 4667497 4667500 ATTTCGCGCCTTTTG TTTTTATGGGC CTT GCCCGTAAAAC TATTTTTTATATCAC TERM 6313 4667500 - 4667522 + F 81 -11.4 -3.18081 | overlap 4667499 4667497 TTTCGCGCCTTTTGT TTTTATGGGC CTT GCCCGTAAAA CTATTTTTTATATCA TERM 6314 4667908 - 4667885 - g 77 -8.2 -4.13343 | gap 1, overlap 4667877 ACAAAGTGGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4667584 - 4668012 + | 50S ribosomal subunit protein L11 TERM 6315 4668559 - 4668519 - g 74 -3.1 -4.98255 | opp_overlap 4668527 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4668016 - 4668720 + | 50S ribosomal subunit protein L1 rplJ 4669012 - 4669509 + | 50S ribosomal subunit protein L10 rplL 4669576 - 4669941 + | 50S ribosomal subunit protein L7/L12 TERM 6316 4669981 - 4670006 + F 100 -17.7 -4.64766 | opp_overlap 4669974 4669972 4669971, overlap 4669952 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 6317 4671077 - 4671056 - g 81 -6.5 -4.87665 | gap 1 GTGTACGTAGAAAAA GGC-CGCCGT ATC ACTGCGCGCC ACATTCGCCAGCTGG TERM 6318 4673303 - 4673287 - g 86 -6.5 -5.10033 | overlap 4673288 CGAAGAGAAACAAAA TCAGCTG GAA CAGCTGG CTGAGCAGTATGACG TERM 6319 4673302 - 4673288 - g 77 -10 -3.64393 | overlap 4673287 GAAGAGAAACAAAAT CAGCTG GAA CAGCTG GCTGAGCAGTATGAC TERM 6320 4674191 - 4674181 - g 74 -3.2 -4.91459 | overlap 4674169 TAAGATGTATAAAAA CATC GTG GACG GCAACCATCAGATGG rpoB 4670261 - 4674289 + | RNA polymerase, beta subunit TERM 6321 4674308 - 4674337 + F 73 -9.2 -3.4252 | opp_overlap 4674326, overlap 4674309 TCGCTCAAACAGGTC ACTGCTGTCGGG GTAAAA CCCGGCAGCGGA TTGTGCTAACTCCGA TERM 6322 4674309 - 4674336 + F 81 -12.7 -2.65298 | opp_overlap 4674326, overlap 4674308 CGCTCAAACAGGTCA CTGCTGTCGGG GTAAAA CCCGGCAGCGG ATTGTGCTAACTCCG TERM 6323 4675706 - 4675722 + G 72 -7.9 -3.87373 | opp_overlap 4675695 4675705 4675702 CGAAGGTAAAGCTAT CCAGCTG CAC CCGCTGG TTTGTGCGGCATATA TERM 6324 4676201 - 4676217 + G 78 -7.9 -4.40561 | CTGCTACCGCATTCT CGGTCTG AAA CCGACCG TTATTTTTGCGGACC rpoC 4674366 - 4678589 + | RNA polymerase, beta prime subunit TERM 6325 4678616 - 4678629 + F 100 -9.5 -5.93809 | opp_overlap 4678616 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTTATGGGGG TERM 6326 4678629 - 4678616 - f 91 -9.5 -4.8384 | opp_overlap 4678616 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTTATGGGGG htrC 4678803 - 4679342 + | heat shock protein TERM 6327 4679368 - 4679343 - T 100 -14.1 -4.17762 | opp_overlap 4679348, overlap 4679348 CAGCCCTCAAAATAA CAAAACCCACC TTAA GGTGGGTTTCG CCAGAGAATTATCTC TERM 6328 4679348 - 4679363 + T 77 -10.4 -3.53343 | opp_overlap 4679343 4679348 CTCAAAATAACAAAA CCCACC TTAA GGTGGG TTTCGCCAGAGAATT TERM 6329 4679363 - 4679348 - T 93 -10.4 -5.093 | opp_overlap 4679348, overlap 4679343 CTCAAAATAACAAAA CCCACC TTAA GGTGGG TTTCGCCAGAGAATT TERM 6330 4679369 - 4679386 + T 71 -9.9 -3.01791 | TTAAGGTGGGTTTCG CCAGAGA ATTA TCTCTGG TATTCAGAACGCCAT thiH 4680885 - 4679752 - | thiamin biosynthesis ThiGH complex subunit thiG 4681652 - 4680882 - | thiamin biosynthesis ThiGH complex subunit TERM 6331 4681126 - 4681165 + g 73 -9.2 -3.61356 | opp_overlap 4681118 4681121, overlap 4681118 4681117 4681127 4681158 TCGACAACCACCGGA ACCGTGGCTTGCTGGATA ATAA TCTCCAGCATGGCACGGG TTTCCAGTCCCTGAT TERM 6332 4681127 - 4681164 + g 77 -12.7 -2.76492 | opp_overlap 4681118 4681121, overlap 4681118 4681117 4681126 4681158 CGACAACCACCGGAA CCGTGGCTTGCTGGATA ATAA TCTCCAGCATGGCACGG GTTTCCAGTCCCTGA thiS 4681854 - 4681654 - | sulphur carrier protein TERM 6333 4681702 - 4681680 - G 72 -4.9 -4.70626 | overlap 4681671 CAATAACCTGAAAAA GCAGGAT CTGGTCGCC ATCCTGC ACGATATGTTGCGCC thiF 4682593 - 4681838 - | thiamin (thiazole moiety) biosynthesis protein thiE 4683221 - 4682586 - | thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) thiC 4685116 - 4683221 - | thiamin (pyrimidine moiety) biosynthesis protein TERM 6334 4683569 - 4683592 + g 70 -6 -4.20367 | GGCGGCAATCTTATA GGTGATAAGC CCCT GCTTAACATC TTCTTTATTAGGCAG rsd 4685825 - 4685349 - | stationary phase protein, binds sigma 70 RNA polymerase subunit TERM 6335 4685977 - 4685941 - g 75 -4.3 -4.78149 | opp_overlap 4685940, overlap 4685944 4685946 CGTATAATTGAAAAA TTAGATCACGGCTGGTG GGT CGTCAGCCATGAACAAA AATTATGGTTGCCGA nudC 4685920 - 4686693 + | NADH pyrophosphatase TERM 6336 4686851 - 4686866 + G 74 -6 -4.56358 | opp_overlap 4686848, overlap 4686852 AATATAAAGCCACGC GCGCCC AGGC GGGCGA TTTTATGTCGCTGTG TERM 6337 4686900 - 4686888 - g 74 -6.2 -4.56597 | GTCGCTGTGCAAAAA CGCC GAGCT GGCG TGCGAAGTGACTTTG hemE 4686733 - 4687797 + | uroporphyrinogen decarboxylase TERM 6338 4687894 - 4687882 - g 72 -7.7 -3.89822 | overlap 4687884 GATCGACTCGATAAA GATCC GCC GGATC TGATCGCCGGAGCCG TERM 6339 4688216 - 4688206 - g 74 -2.4 -5.08824 | opp_overlap 4688206 GGCGTAGCGAAAAAA CGGC TCT GCGG TAAATTCGAACCGCT nfi 4687807 - 4688478 + | endonuclease V yjaG 4688521 - 4689111 + | hypothetical protein hupA 4689298 - 4689570 + | HU, DNA-binding transcriptional regulator, alpha subunit TERM 6340 4689601 - 4689616 + G 100 -10.4 -4.84918 | opp_overlap 4689601 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC TERM 6341 4689616 - 4689601 - g 72 -10.4 -3.35639 | opp_overlap 4689601 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC yjaH 4689583 - 4690278 + | hypothetical protein zraP 4690699 - 4690280 - | Zn-binding periplasmic protein TERM 6342 4690810 - 4690790 - H 71 -9.7 -3.09803 | opp_overlap 4690802, overlap 4690802 CAATCTGACGTAATA GGCGAGTAA AAA TGACTCGCC TGCTGCGGGTAGCGA TERM 6343 4690802 - 4690829 + H 86 -7.8 -4.81083 | gap 1, opp_overlap 4690790 4690802 ATAGGCGAGTAAAAA TGACTCGCCTGCT GCG GGTAG-CGAGTCA TTTTTACTCATTGAA TERM 6344 4690829 - 4690802 - H 80 -6.2 -4.74132 | opp_overlap 4690802, overlap 4690790 ATAGGCGAGTAAAAA TGACTCGCCTGC TGCG GGTAGCGAGTCA TTTTTACTCATTGAA zraS 4690937 - 4692313 + | sensory histidine kinase in two-component regulatory system with ZraR TERM 6345 4693257 - 4693237 - g 77 -12.5 -2.75064 | opp_overlap 4693233, overlap 4693234 GTGGCGATTGAAGTA CCGTCGCTG CGT CAGCGGCGG GAAGATATTCCTCTG TERM 6346 4693586 - 4693559 - g 90 -10.4 -4.4009 | opp_overlap 4693559 CGGCACTGGAGAAAA CGGGCGGCAACA AAAC CGAAGCCGCCCG TCAGTTAGGGATCAC zraR 4692310 - 4693635 + | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator ; sigma54 interaction protein purD 4694921 - 4693632 - | phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase TERM 6347 4693740 - 4693713 - G 77 -11.3 -3.15249 | opp_overlap 4693720, overlap 4693720 GATATCGGTCATTAA GGCATAAGCGC GTTTCT GCGCTTCTGCC ACGGTATGACCCAGC purH 4696522 - 4694933 - | fused IMP cyclohydrolase ; phosphoribosylaminoimidazolecarboxamide formyltransferase TERM 6348 4695428 - 4695445 + g 74 -9.9 -3.5393 | opp_overlap 4695405, overlap 4695414 4695413 CCACTGACCGCAGGT CAGAACG CGTA CGTTCTG TTTGGCGGCGGTGAT TERM 6349 4696594 - 4696553 - R 100 -20.5 -2.96216 | opp_overlap 4696588 4696590, overlap 4696555 4696590 TTTGACTATTACAGA GAGCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGCCC CTAACGGGGCATCCT TERM 6350 4696592 - 4696555 - R 100 -19.5 -3.03443 | opp_overlap 4696588 4696590, overlap 4696553 4696590 TGACTATTACAGAGA GCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGC CCCTAACGGGGCATC TERM 6351 4696639 - 4696657 + r 74 -2.4 -5.20783 | opp_overlap 4696637, overlap 4696643 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTCTTTCAAT TERM 6352 4696926 - 4696912 - R 76 -4.2 -5.0916 | opp_overlap 4696912, overlap 4696913 4696920 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 6353 4696958 - 4696946 - R 72 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 6354 4698750 - 4698737 - R 74 -6.7 -4.41177 | overlap 4698741 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 6355 4698976 - 4698952 - R 72 -8 -3.93061 | gap 1, opp_overlap 4698959 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 6356 4699530 - 4699518 - R 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 6357 4700832 - 4700821 - R 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 6358 4702154 - 4702203 + r 100 -23.3 -4.09117 | opp_overlap 4702158 4702163 4702168, overlap 4702163 4702168 GGAACTGCCAGGCAT CAAATAAAACAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TTGTTTGTCGGTGAA TERM 6359 4702199 - 4702158 - R 100 -20.5 -3.76224 | opp_overlap 4702154 4702163 4702168, overlap 4702163 4702168 CTGCCAGGCATCAAA TAAAACAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTA TCTGTTGTTTGTCGG TERM 6360 4702163 - 4702194 + r 100 -18.2 -4.74989 | opp_overlap 4702158 4702163 4702168, overlap 4702154 4702168 AGGCATCAAATAAAA CAAAAGGCTCAGTC GAAA GACTGGGCCTTTTG TTTTATCTGTTGTTT TERM 6361 4702194 - 4702163 - R 100 -16 -4.9448 | opp_overlap 4702163 4702154 4702168, overlap 4702158 4702168 AGGCATCAAATAAAA CAAAAGGCTCAGTC GAAA GACTGGGCCTTTTG TTTTATCTGTTGTTT TERM 6362 4702189 - 4702168 - R 100 -10.1 -5.34857 | opp_overlap 4702168 4702163 4702154, overlap 4702163 4702158 TCAAATAAAACAAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 6363 4702168 - 4702189 + r 100 -12.3 -5.24647 | opp_overlap 4702163 4702158 4702168, overlap 4702163 4702154 TCAAATAAAACAAAA GGCTCAGTC GAAA GACTGGGCC TTTTGTTTTATCTGT TERM 6364 4702254 - 4702240 - R 72 -7.8 -3.99324 | opp_overlap 4702240 CCTGAGTAGGACAAA TCCGCC GGG AGCGGA TTTGAACGTTGCGAA TERM 6365 4702336 - 4702355 + r 100 -13.6 -4.7629 | opp_overlap 4702336 TCAAATTAAGCGAAA GGCCATCC GTCA GGATGGCC TTTTTGCGTTGGTGC TERM 6366 4702355 - 4702336 - R 100 -13.6 -3.83214 | opp_overlap 4702336 TCAAATTAAGCGAAA GGCCATCC GTCA GGATGGCC TTTTTGCGTTGGTGC TERM 6367 4702412 - 4702379 - R 89 -2.9 -5.75342 | opp_overlap 4702386 4702387 4702389, overlap 4702380 TTGGTGCAAAAAAAA TGCCGGATGCGACGC TGGC GCGTCTTCTCCAGCC TGGGCAGGCACGGCA yjaB 4702879 - 4702436 - | putative acetyltransferase metA 4703036 - 4703965 + | homoserine transsuccinylase TERM 6368 4704011 - 4704026 + F 100 -10.4 -5.63517 | CAGCACCTTACCTCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4704234 - 4705835 + | malate synthase A TERM 6369 4706069 - 4706054 - g 77 -3.2 -5.0538 | GGCGAGTCGAAAAAA GGCTAC ATCA ACAGCC TCGGTGCACTGACTG aceA 4705865 - 4707169 + | isocitrate lyase TERM 6370 4707202 - 4707177 - f 77 -10.3 -3.53712 | AGTTCTAACAACCAA CGCCCCTTTCC GTAA GGCGAGGGGCG AATTAAGGAGAGGCG TERM 6371 4707499 - 4707520 + G 79 -3.6 -5.09895 | GTTGCCGGATTACCC GCGCTTCG AGATTG CGGAGAGC TTTTTTAACTCCGTG TERM 6372 4707555 - 4707578 + G 88 -5.2 -5.20783 | overlap 4707556 GTCGGTTATTTGACC ACCGCTCG CTTACTCC CGAGCGGC TTTTTATCTTTAGCT TERM 6373 4708434 - 4708419 - g 90 -6.8 -5.07053 | opp_overlap 4708430 AAGCAGCGGAAAAAA TCACCG ATCT CGGCGA ACAAATTGTGATTCG TERM 6374 4708461 - 4708485 + G 78 -12.2 -2.91264 | TTCGCCATCTTTATA TTGAGCGGCG GATGG TGCCGCTCAA TATCTGGCTGGAGCA aceK 4707218 - 4708954 + | isocitrate dehydrogenase kinase/phosphatase arpA 4711109 - 4708923 - | regulator of acetyl CoA synthetase iclR 4712250 - 4711426 - | DNA-binding transcriptional repressor TERM 6375 4711607 - 4711572 - G 70 -6.1 -4.18018 | opp_overlap 4711574, overlap 4711574 GGTGCTCATCGAAAA TACATGCCGCGAGAC AACGCA GTCCCAGGGCATGTT CTTCATCATCAAATG TERM 6376 4712274 - 4712288 + H 77 -3.6 -5.30348 | CCTTTTTCTGTATCG TGGAAA TCA TTTTCA TTTTTATTGTTAGCT TERM 6377 4715436 - 4715424 - g 81 -4.7 -5.03145 | TAAGCGCCGAAAAAA CGCTG AAT CCGCG TGGCGTGGTGGGCCT metH 4712450 - 4716133 + | homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent TERM 6378 4716162 - 4716192 + F 85 -10.4 -4.29106 | opp_overlap 4716166, overlap 4716164 4716166 CACTTTTCCTTACAA CAAACAGGGCGCTC AAT GAGTGCCCTGTCTC TTTATTAATATGAAA TERM 6379 4716164 - 4716190 + F 100 -13 -3.7456 | opp_overlap 4716166, overlap 4716162 4716166 CTTTTCCTTACAACA AACAGGGCGCTC AAT GAGTGCCCTGTC TCTTTATTAATATGA TERM 6380 4716166 - 4716188 + F 100 -15.6 -3.44527 | opp_overlap 4716166, overlap 4716164 4716162 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 6381 4716188 - 4716166 - f 100 -13.4 -4.30719 | opp_overlap 4716166 4716164 4716162 TTTCCTTACAACAAA CAGGGCGCTC AAT GAGTGCCCTG TCTCTTTATTAATAT TERM 6382 4716429 - 4716447 + G 77 -10.2 -3.70417 | overlap 4716430 4716439 TTCGAACCGGCGTAA TGCGCGTC TTC GGCGCGCG TTTGCGTACTGTCCT TERM 6383 4716430 - 4716446 + G 73 -11.5 -2.81768 | overlap 4716429 4716439 TCGAACCGGCGTAAT GCGCGTC TTC GGCGCGC GTTTGCGTACTGTCC TERM 6384 4717721 - 4717733 + G 71 -3.3 -4.84311 | overlap 4717716 CTCAGTAATTTAAAA CTGGC AAT GTCGG TTTTCTTCTCTGGCG yjbB 4716353 - 4717984 + | putative transporter TERM 6385 4718067 - 4718047 - T 81 -11.2 -3.25896 | opp_overlap 4718046, overlap 4718045 GCACTATGTACAAGA TGCCGGAT CATGC ATCCGGCA ATTCACTTAAAAACG pepE 4718763 - 4718074 - | (alpha)-aspartyl dipeptidase TERM 6386 4718673 - 4718659 - G 81 -9.2 -4.02534 | AGCGAAAGGGATAAA CACCGC TGA GCGGCG ACCCTGCAACTGTTC TERM 6387 4719011 - 4719036 + r 81 -3.2 -5.39755 | opp_overlap 4719011, overlap 4719013 4719016 GTACTTTGCCACCAA TTTGAGCGCC CCTTAA GGCGCTGATA TTTTTTATCCTTCTC TERM 6388 4719013 - 4719034 + r 70 -5.8 -4.31563 | opp_overlap 4719011, overlap 4719011 4719016 ACTTTGCCACCAATT TGAGCGCC CCTTAA GGCGCTGA TATTTTTTATCCTTC ECUMN_4548 4720386 - 4719145 - | L-sorbose 1-phosphate reductase TERM 6389 4720171 - 4720212 + g 95 -6.6 -5.4588 | gap 1, overlap 4720175 ATCGCCGCAAAACTC GTGGCCGATGATGATGGGG TTGGT CGCCA-CATCGTCGGGTAC TTTTTTATGGTTTTC ECUMN_4549 4721280 - 4720426 - | sorbose permease IID component ECUMN_4550 4722058 - 4721261 - | sorbose permease IIC component (PTS system) TERM 6390 4721455 - 4721436 - G 74 -2.8 -4.91852 | CCGAGGAAAAAGAAA GGCATCAA ATAT TTCACGCC CATCATACGTAGCAC TERM 6391 4721624 - 4721608 - G 72 -10.1 -3.36273 | overlap 4721604 GTGCCGGAATAGCAA CGCGCAG CGC CTGCACG CCAAGCGCGGAGACA ECUMN_4551 4722618 - 4722124 - | sorbose-specific phosphotransferase enzyme IIB component (PTS system) ECUMN_4552 4723025 - 4722618 - | sorbose-specific phosphotransferase enzyme IIA component (PTS system) TERM 6392 4723024 - 4723013 - G 79 -2.2 -5.24129 | CGTGGGCACAAAAAA TGGC GTTG ACCA TAAAGCCTCCTTAGC ECUMN_4553 4723841 - 4723035 - | sorbitol-6-phosphate 2-dehydrogenase TERM 6393 4723286 - 4723298 + g 73 -9.1 -3.59649 | GCGCGATACCGACTA CACGG ATA CCGTG TTTACCCAATTCTTT ECUMN_4554 4724942 - 4723911 - | sorbitol/sorbose operon activator TERM 6394 4726033 - 4726013 - g 72 -4.5 -4.61527 | overlap 4726015 AAAACGGCGGAAAAA GGCGGTCGC CCG GCGTCCAAC GGTAAGCGTTTTACC yjbC 4725206 - 4726078 + | 23S rRNA pseudouridine synthase yjbD 4726351 - 4726079 - | hypothetical protein TERM 6395 4726599 - 4726564 - R 100 -12.7 -5.24416 | opp_overlap 4726562 4726564 4726567 TAATGACAAGAAAAA CAATACGGCCCGAAA TATAGC TTCCGGGCCATACTG TGTTTACTCAAACAA TERM 6396 4726634 - 4726622 - R 85 -7.7 -4.72863 | TCAAACAAATTAAAA TGCAG CTT CTGCA CCACCTGCTCGGCAT lysC 4727952 - 4726603 - | aspartokinase III TERM 6397 4728553 - 4728586 + G 100 -14.8 -4.93318 | gap 1, opp_overlap 4728549 4728546 AAATGAAAGACGTTA CGATCGCCGATCTTT TTGCT AAAGA-CGGCGATCG TTTTTCTAAGTTCTC pgi 4728477 - 4730126 + | glucosephosphate isomerase TERM 6398 4730278 - 4730260 - T 82 -10.3 -3.97139 | opp_overlap 4730260 TAACCTTAATAACAA TGCCGAC GTTAT GTCGGCA TTTTTTTATCAGATA TERM 6399 4730260 - 4730278 + T 100 -11 -5.626 | opp_overlap 4730260 TAACCTTAATAACAA TGCCGACG TTA TGTCGGCA TTTTTTTATCAGATA ECUMN_4559 4730823 - 4730575 - | hypothetical protein TERM 6400 4730905 - 4730926 + H 85 -11.7 -3.32343 | opp_overlap 4730908, overlap 4730908 TGAAGGGATTTACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 6401 4730923 - 4730908 - H 73 -9 -3.42699 | opp_overlap 4730905 4730908 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT TERM 6402 4730908 - 4730923 + H 77 -9 -3.80174 | opp_overlap 4730908, overlap 4730905 AGGGATTTACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT yjbF 4730950 - 4731588 + | putative lipoprotein yjbG 4731585 - 4732322 + | hypothetical protein yjbH 4732322 - 4734418 + | putative porin TERM 6403 4734457 - 4734430 - gT 80 -8.5 -4.21275 | opp_overlap 4734429 CTAAGTCATGGAAAA GGTGCCAGT TTTCGCACTC ACTGGCACC CTCATTCTTAATGGC ECUMN_4564 4734743 - 4734465 - | conserved hypothetical protein; putative exported protein ECUMN_4563 4734422 - 4734583 + | hypothetical protein TERM 6404 4734745 - 4734759 + FH 71 -8.6 -3.5616 | AGGTTACGTTTCATT TGTTCC AGA GGAACA TTGTCGATTTTTCGC TERM 6405 4734795 - 4734810 + FH 78 -5.4 -5.02476 | GCTGGTGGCTGGGAA TCACCT GAAT GGGTGA TTTTTTGGACAGTGT yjbA 4734957 - 4735367 + | putative phosphate starvation inducible protein TERM 6406 4735390 - 4735373 - T 100 -12.7 -5.52384 | GCGGGAGTAAAAAAA GGCGCTC CGTG GAGCGCC GAATAACAGTCACAA malG 4736351 - 4735461 - | maltose transporter subunit ; membrane component of ABC superfamily malF 4737910 - 4736366 - | maltose transporter subunit ; membrane component of ABC superfamily malE 4739254 - 4738064 - | maltose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 6407 4740056 - 4740080 + G 75 -4.4 -4.7497 | gap 2, overlap 4740023 TGTGGCGATTGGCCG TACGCTGGTGGC CGA GCCA--AGCGTA TTTTTGCTCGATGAA TERM 6408 4740290 - 4740314 + G 72 -7.9 -3.97368 | gap 1 GGAGCTGTACCACTA TCCGGCAGAC CGTTTT GTC-GCCGGA TTTATCGGTTCGCCA malK 4739619 - 4740734 + | fused maltose transport subunit, ATP-binding component of ABC superfamily ; regulatory protein lamB 4740806 - 4742146 + | maltose outer membrane porin (maltoporin) TERM 6409 4742194 - 4742155 - f 74 -7 -4.4261 | overlap 4742156 4742157 4742169 4742170 GTGGTAATAGCAAAA CCTGGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATAAA ACAGGTTGTCATTAT TERM 6410 4742229 - 4742216 - f 77 -9.5 -3.62096 | opp_overlap 4742211 4742216 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT TERM 6411 4742216 - 4742229 + F 70 -9.5 -2.97017 | opp_overlap 4742216, overlap 4742211 TGTCATTATCTGAAA GGGGC GAAA GCCCC TCTGATTATCGGGTT malM 4742296 - 4743216 + | maltose regulon periplasmic protein TERM 6412 4743249 - 4743268 + F 100 -11.4 -5.71983 | opp_overlap 4743248 4743247 GATTTTGCAACAACT GGTGCGTC TCCT GGCGCACC TTTTTTTATGCTTCA TERM 6413 4743925 - 4743937 + G 71 -2.7 -4.82901 | TTTAAATGTCGACGT TTACA CAA TGTGA TTTTTATCAAAGCGA TERM 6414 4744406 - 4744364 - g 80 -5.2 -4.88407 | opp_overlap 4744363 TGATGCAATTAAAAA TTCTTAATATTGTTAATAAA AAC TTTATTGAGAATATGAAGAA AATATTTAGCCATTG yjbI 4743445 - 4745025 + | hypothetical protein ubiC 4745248 - 4745745 + | chorismate pyruvate lyase ubiA 4745758 - 4746630 + | p-hydroxybenzoate octaprenyltransferase TERM 6415 4746660 - 4746643 - T 100 -11.3 -5.1101 | opp_overlap 4746643 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGCTGC TERM 6416 4746643 - 4746660 + T 93 -11.3 -4.32177 | opp_overlap 4746643 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGCTGC plsB 4749208 - 4746785 - | glycerol-3-phosphate O-acyltransferase dgkA 4749379 - 4749747 + | diacylglycerol kinase lexA 4749857 - 4750465 + | DNA-binding transcriptional repressor of SOS regulon TERM 6417 4750479 - 4750502 + F 100 -16 -4.94262 | AACATATCTCTGAGA CCGCGATGCC GCCT GGCGTCGCGG TTTGTTTTTCATCTC dinF 4750484 - 4751863 + | DNA-damage-inducible SOS response protein TERM 6418 4751955 - 4751936 - f 73 -4.3 -4.77567 | opp_overlap 4751922 ACGTTCAGAAGAAAA GTGAACG TACTCT CATTCAC AACCTAACGATGAGG yjbJ 4751979 - 4752188 + | putative stress response protein zur 4752745 - 4752230 - | DNA-binding transcriptional repressor, Zn(II)-binding TERM 6419 4752627 - 4752615 - G 71 -9.1 -3.49858 | TCAAGCAGATCATAA GCGCT GAT AGCGC CATCCTGCAGACTCA ECUMN_4582 4753063 - 4754025 + | hypothetical protein TERM 6420 4754088 - 4754067 - f 80 -7.3 -4.57755 | opp_overlap 4754067, overlap 4754070 AGGCATTATATAAAA GGACCCAAT GCTT ATTGGGTTC TTTTTTTCTCTATCA TERM 6421 4754067 - 4754088 + F 100 -9.5 -5.76633 | opp_overlap 4754067 4754070 AGGCATTATATAAAA GGACCCAAT GCTT ATTGGGTTC TTTTTTTCTCTATCA TERM 6422 4754244 - 4754258 + F 86 -7.2 -5.09259 | TGAGAACTTCATGCC TTGAGA GGA TCTCAA TTTTCTTTTGCAATG yjbN 4754388 - 4755425 + | tRNA-dihydrouridine synthase A TERM 6423 4755456 - 4755479 + GT 100 -13.1 -4.43681 | opp_overlap 4755453 4755450 TAGTCAAATTCACCA CGCCCTGCG CACCGT CGCGGGGCG TTTTGCTGTTAAATC yjbO 4755349 - 4755801 + | putative membrane protein of unknown function TERM 6424 4755936 - 4755960 + T 91 -10 -4.77775 | opp_overlap 4755938, overlap 4755938 CGAACTATAAAAAGA AAGGGCTTCC CAGGT GGAAGCCCTA TTTCTTTTATGGAAT TERM 6425 4755938 - 4755958 + T 100 -12.6 -3.99938 | opp_overlap 4755938, overlap 4755936 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA TERM 6426 4755958 - 4755938 - T 100 -12.6 -5.00267 | opp_overlap 4755938 4755936 AACTATAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC TATTTCTTTTATGGA qor 4756950 - 4755967 - | quinone oxidoreductase, NADPH-dependent TERM 6427 4756407 - 4756419 + g 91 -9.1 -4.59853 | ATGCGCCCGCTTTTA GCGCA CTC TGCGC TTTTTGCGCGGTTCC TERM 6428 4756454 - 4756464 + g 77 -8.2 -4.09685 | GTGCCGATAAGTTTC GCCC CAA GGGC TTTTGCCCACTGGCA TERM 6429 4757705 - 4757685 - g 100 -6.7 -5.80364 | opp_overlap 4757684 4757685 ATCTCAACAAAAAAA CCGCTGGCT TGC AGCCGTCGG ATTTGATCATCGTCG TERM 6430 4758381 - 4758356 - g 74 -8.9 -3.9281 | ATTATCGGTAAACAA CGTAACGGCCC AATC GGGACGGTACG CCTGACCTTTAACGG dnaB 4757033 - 4758448 + | replicative DNA helicase TERM 6431 4759073 - 4759089 + G 72 -5.8 -4.34402 | opp_overlap 4759059 AGGTCAACGTTCCAT TGCCGC ATCGG GTGGCA TTTTACTCTGGCCAC alr 4758501 - 4759580 + | alanine racemase 1, PLP-binding, biosynthetic tyrB 4759833 - 4761026 + | tyrosine aminotransferase, tyrosine-repressible, PLP-dependent TERM 6432 4761059 - 4761036 - T 100 -16.8 -3.79668 | ATGTAATGCAGGAAA GCAGGCTGGA GTTA TCCAGCCTGC AGTGAAATTAAACTG ECUMN_4590 4761790 - 4761248 - | hypothetical protein TERM 6433 4762426 - 4762411 - g 86 -4 -5.40072 | GGCGCGGCAAAAAAA CCTTCT CGCC AGAAAG CGAAGATTATCTGAA aphA 4762152 - 4762865 + | acid phosphatase/phosphotransferase, class B, non-specific TERM 6434 4762866 - 4762900 + F 90 -4.3 -5.52384 | gap 2, opp_overlap 4762870, overlap 4762869 AATTCAGAATACTGA CAG-A-GCGGGAGAGCG TGA CACTCTCCCGAATGCTG TTTTTTTAATCACAC TERM 6435 4762894 - 4762870 - f 80 -12.1 -2.95894 | opp_overlap 4762869 4762866 CAGAATACTGACAGA GCGGGAGAGCG TGA CACTCTCCCGA ATGCTGTTTTTTTAA yjbQ 4762976 - 4763392 + | hypothetical protein TERM 6436 4763564 - 4763550 - g 74 -7.8 -4.07568 | overlap 4763528 4763553 CGGTTTCGCTGAAAA CCAGCC CGG AGCTGG CGGAGCTGCTACGTC yjbR 4763396 - 4763752 + | hypothetical protein TERM 6437 4763779 - 4763761 - T 100 -12.4 -4.55128 | ACTCTGAAAGGAAAA GGCCGCTC AGA AAGCGGCC TTAACGATTACAGCA uvrA 4766609 - 4763787 - | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC ssb 4766864 - 4767400 + | Single-stranded DNA-binding protein TERM 6438 4767470 - 4767492 + T 89 -14.2 -3.00022 | opp_overlap 4767470, overlap 4767473 GCCAGCCGTAAAAAA GAAGCCTCCG TTT TGGAGGCTTC TATATATCAAGTCAA TERM 6439 4767492 - 4767470 - T 100 -13.5 -5.03314 | opp_overlap 4767470 4767473 GCCAGCCGTAAAAAA GAAGCCTCC GTTTT GGAGGCTTC TATATATCAAGTCAA TERM 6440 4767473 - 4767489 + T 78 -10.1 -3.64466 | opp_overlap 4767470, overlap 4767470 AGCCGTAAAAAAGAA GCCTCCG TTT TGGAGGC TTCTATATATCAAGT yjcB 4767780 - 4767499 - | conserved hypothetical protein; putative inner membrane protein TERM 6441 4767903 - 4767883 - H 74 -4.1 -5.00895 | opp_overlap 4767883 TGCAGGACACAAAAA TGAAACA CTCTGTT TGTTTCA TTAATTTTGTGAACT TERM 6442 4768611 - 4768621 + G 82 -2.4 -5.38047 | TCTATCTATTATTAC CGCG ATA CGCC TTTTTTCTCTGGCTA TERM 6443 4769295 - 4769305 + G 72 -6.8 -4.2828 | GTTTCTATTAACCTG TCGG CCT CCGA TTTTCATACGTCACG TERM 6444 4769792 - 4769763 - g 95 -15.1 -3.19389 | CAATGGATGGAGCAA TTACCCGCGCG GGAGTTAA CGCGCGGGTAA TAAAACTACAGGCGG yjcC 4768200 - 4769792 + | putative signal transduction protein (EAL domain containing protein) soxS 4770121 - 4769798 - | DNA-binding transcriptional dual regulator soxR 4770207 - 4770671 + | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing TERM 6445 4770870 - 4770846 - f 100 -14.4 -4.78848 | opp_overlap 4770846 TTCGCAAACACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 6446 4770846 - 4770870 + F 100 -14.4 -4.67651 | opp_overlap 4770846 TTCGCAAACACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 6447 4771567 - 4771551 - g 71 -9.4 -3.53811 | opp_overlap 4771560 GGCATGTTGGGTAAA GCAGGC TTCCC GCCTGC GGCAGTTTTCGTTGC yjcD 4771395 - 4772744 + | putative permease TERM 6448 4772760 - 4772791 + F 100 -12.4 -4.37658 | opp_overlap 4772766, overlap 4772766 TCTTTCATATGATTC TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA TTTTCTCCGCACATT TERM 6449 4772766 - 4772785 + F 100 -9.2 -5.54907 | opp_overlap 4772766, overlap 4772760 ATATGATTCTGAAAA CGGGTGGC AATG GCTGCCCG TTTTTATTTTCTCCG TERM 6450 4773045 - 4773062 + G 74 -2.7 -4.94672 | TTTGGTTTGCATGTG GAGTTTG ATCC TGAACTC TTTTTAGTCTTGTTT TERM 6451 4773420 - 4773446 + G 72 -7.4 -3.87815 | gap 1, overlap 4773388 ATGGGGACGATGATC TTC-ACCGTCG GCGGTG CGACGGTCGAA TTTATGAAAGTGGCC yjcE 4772895 - 4774544 + | putative cation/proton antiporter TERM 6452 4774585 - 4774602 + T 77 -9.9 -3.5774 | opp_overlap 4774585 AGGTAATTTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT TERM 6453 4774602 - 4774585 - T 91 -9.9 -4.67234 | opp_overlap 4774585 AGGTAATTTGAAAAA GGTGCAA TCTT TTGCACC TTTAACAGGTTAGCT yjcF 4775990 - 4774698 - | hypothetical protein TERM 6454 4776158 - 4776135 - R 100 -16.8 -2.79321 | overlap 4776132 TGCAGAGGAAGAGTA TTCCCCGGTC AGGC GACCGGGGAA GGGGAGAGATTAATG actP 4777817 - 4776168 - | acetate transporter TERM 6455 4777782 - 4777810 + g 72 -6 -4.33105 | gap 1 GTTAGCTGCGAAAGG GAG-TGTGGCGGC AAGC GCCGTCAGAACTC TTTTCATGATGCTTG yjcH 4778128 - 4777814 - | conserved hypothetical protein; putative inner membrane protein involved in acetate transport TERM 6456 4778050 - 4778065 + g 75 -5.4 -4.62783 | overlap 4778051 TAATCGACAGGATGG TGGCAA ACCG TTGCCG TTTTTCGACTAACTC TERM 6457 4778251 - 4778220 - R 79 -12.2 -2.52464 | opp_overlap 4778231, overlap 4778230 4778231 CCCTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATCAACGCCTGATGC TERM 6458 4778277 - 4778324 + r 100 -15.6 -3.29144 | opp_overlap 4778258 4778257 4778311, overlap 4778262 4778323 GATGCGTCGCTGTCG CGTCTTATCAGGCCTACAGCCG TTGC CGAATGTAGGCCGGGTAAGGCG TTATACGCCGCATCC TERM 6459 4778369 - 4778416 + r 100 -17.8 -3.53811 | opp_overlap 4778350 4778349 4778403 4778413 4778414, overlap 4778323 4778354 4778413 GATGCGTCGCTGTCG CGTCTTATCAGGCCTACAGCCG TTGC CGAATGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 6460 4778434 - 4778403 - R 79 -12.2 -2.52464 | opp_overlap 4778369 4778413, overlap 4778413 4778414 CCGTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATCAATGCCTGATGC TERM 6461 4778460 - 4778506 + r 81 -10.9 -3.53811 | gap 1, opp_overlap 4778441 4778440 4778493 4778503 4778504, overlap 4778413 4778492 4778493 GATGCGTCGCTGTCG CGTCT-ATCAGGCCTACAGCCG TTGC CGAATGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 6462 4778524 - 4778493 - R 79 -12.2 -2.52464 | opp_overlap 4778460 4778492 4778493, overlap 4778503 4778504 CCGTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATTAATGCCTGATGC TERM 6463 4778493 - 4778524 + r 70 -10 -2.51464 | opp_overlap 4778493 4778503 4778504, overlap 4778460 4778492 CCGTTGCCGAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA ATTAATGCCTGATGC TERM 6464 4778550 - 4778504 - R 74 -10.7 -2.57931 | opp_overlap 4778460 4778493 4778492 4778535, overlap 4778493 4778503 4778530 4778531 TGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCA ATTAA TGCCTGATGCGACGCTGTCGC GTCTTATCAGGCCTA TERM 6465 4778563 - 4778530 - R 74 -9.5 -3.34344 | opp_overlap 4778535, overlap 4778504 4778503 4778531 GCATCCGGCAATTAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAAACCGTTACCG TERM 6466 4778562 - 4778531 - R 84 -13 -2.60392 | opp_overlap 4778535, overlap 4778504 4778503 4778530 CATCCGGCAATTAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAAACCGTTACC TERM 6467 4778535 - 4778553 + r 80 -11 -3.30124 | opp_overlap 4778504 4778503 4778531 4778530 CGGCAATTAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA acs 4780559 - 4778601 - | acetyl-CoA synthetase TERM 6468 4779250 - 4779260 + g 78 -8.2 -4.19817 | AAGAACGGACGTGTT GCCG AAC CGGC TTTTAGCTCGGTAGC TERM 6469 4780277 - 4780293 + g 77 -6.5 -4.64676 | opp_overlap 4780277, overlap 4780278 CGCCTTCCCAGATGA TGGCGGT ACG ATCGCCG TTTTCTTGCAGATGG TERM 6470 4780933 - 4780913 - H 100 -9.7 -5.51353 | overlap 4780914 GAAAAACAATAAAAA CCGCCATTG CAA CAATGGCGC AATTCGGATGAAGCC TERM 6471 4780932 - 4780914 - H 100 -13.2 -3.87151 | overlap 4780913 AAAAACAATAAAAAC CGCCATTG CAA CAATGGCG CAATTCGGATGAAGC TERM 6472 4781563 - 4781545 - g 72 -8 -3.8709 | opp_overlap 4781559 AAACCTTTTGAGAAA GCCGGACG TTT CGACCAGC AATCGATGGTTTGCG nrfA 4780951 - 4782387 + | nitrite reductase, formate-dependent, cytochrome nrfB 4782432 - 4782998 + | nitrite reductase, formate-dependent, penta-heme cytochrome c TERM 6473 4783098 - 4783147 + G 75 -11.5 -2.93703 | gap 1, overlap 4783100 TGAATATCAATGGGG TGCGTTACGGCATGGTGCATGACG AGT CGTTATGCATCG-GCTGTACCGCC TGTATGGATGCTTGT nrfC 4782995 - 4783666 + | formate-dependent nitrite reductase, 4Fe4S subunit TERM 6474 4784300 - 4784286 - g 70 -4.2 -4.62336 | overlap 4784288 ATGTCAGCGCAAAAA TCCGCA TTC CACGGA AGCGCACTTTGTACA nrfD 4783663 - 4784619 + | formate-dependent nitrite reductase, membrane subunit TERM 6475 4786128 - 4786140 + G 100 -10.5 -4.82901 | opp_overlap 4786128 GCATTGGTGAACTGA CGCCG GAG CGGCG TTTTTATGAAGCACG nrfE 4784699 - 4786357 + | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE nrfF 4786350 - 4786733 + | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF nrfG 4786730 - 4787326 + | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG TERM 6476 4788791 - 4788807 + G 70 -6.5 -4.17958 | overlap 4788802 GCAGCGTAGGGATCC CGCTGGA AGG TCTGGCG TTTATTGCCGGTGTT gltP 4787668 - 4788981 + | glutamate/aspartate:proton symporter TERM 6477 4788989 - 4789012 + T 70 -9.6 -2.91912 | opp_overlap 4788987 4788989 ATCAATAATTGAAGA TTGCCGGG GATATCCA CCCGGCAA TGTGTGGATGCCTGA TERM 6478 4789012 - 4788989 - T 72 -9.6 -3.21153 | gap 1, opp_overlap 4788989, overlap 4788987 ATCAATAATTGAAGA TTGCCGGG-GA TAT CCACCCGGCAA TGTGTGGATGCCTGA TERM 6479 4789247 - 4789281 + T 74 -10.7 -2.53911 | opp_overlap 4789222 4789247 4789248, overlap 4789229 4789228 4789252 CGCATCCGACATCAA TGCCTGATGCGACGC TTGTC GCGTCTTATCAGGCC TACCTTAACCGTTGG TERM 6480 4789280 - 4789248 - T 79 -12 -2.55999 | opp_overlap 4789229 4789228 4789247 4789252, overlap 4789222 4789247 GCATCCGACATCAAT GCCTGATGCGACGC TTGTC GCGTCTTATCAGGC CTACCTTAACCGTTG TERM 6481 4789252 - 4789271 + T 76 -10 -3.30243 | opp_overlap 4789222 4789248 4789247, overlap 4789229 4789228 4789247 CCGACATCAATGCCT GATGCGAC GCTT GTCGCGTC TTATCAGGCCTACCT TERM 6482 4789286 - 4789300 + T 70 -7.2 -3.89501 | CTTATCAGGCCTACC TTAACC GTT GGTTAA TTTCTCAAACTCTTC yjcO 4789975 - 4789286 - | hypothetical protein TERM 6483 4790054 - 4790035 - R 100 -13.6 -5.66684 | GAATGGATAAAAAAA CAGCCTCC GGAA GGAGGCTG TAGAAAGGACTGTAT fdhF 4792216 - 4790069 - | formate dehydrogenase-H, selenopolypeptide subunit TERM 6484 4790355 - 4790388 + g 74 -8.3 -3.91897 | gap 1 ACCAATGCCTCATCT TCAATACC-CAGACGT TTG GCGTCTTCGGTATTGA TTTGTGCGTAGCCAG TERM 6485 4790902 - 4790913 + g 75 -7.2 -4.30576 | opp_overlap 4790899 GTAAAATAACATCCG CCGC CGAC GCGG TTTTGGTCATAAAGA TERM 6486 4791387 - 4791408 + g 79 -12.3 -3.06815 | opp_overlap 4791385 GCCGCCTGACGAATC TCACTGGCG CTGA CGCCGGTGA TATCTTCAACCGACT TERM 6487 4791468 - 4791503 + g 77 -6.3 -4.69053 | gap 1 TACTCTTCAAAGCCT TCTGTACGG-GAAGCG ACGAA TGCTTTGTCGTACAGA TTTTCTTCAATAATG TERM 6488 4791539 - 4791557 + g 72 -4.4 -4.66609 | opp_overlap 4791539 4791541, overlap 4791541 GCCCATCGCATTCAA CAGCGCGA TGT TCGAGCCG TTTTTCAGTGCAATG TERM 6489 4792407 - 4792382 - R 93 -11.9 -4.10552 | overlap 4792384 CGTGACGAAACGAAA TACCGCGTGAC AGCC ATCACGCGGCA GACATTTTATTTTTT TERM 6490 4792405 - 4792384 - R 95 -12.3 -3.64541 | overlap 4792382 TGACGAAACGAAATA CCGCGTGAC AGCC ATCACGCGG CAGACATTTTATTTT yjcP 4793880 - 4792414 - | outer membrane factor of efflux pump TERM 6491 4792601 - 4792640 + g 75 -11.4 -2.92642 | gap 1, overlap 4792599 GCGGCCTCGGCAGCG CGCTGGGTGAAGCGCGTGG CTT CCACGCG-TTCAGCCTGCA TCTCTCGCTCGTCGT TERM 6492 4792899 - 4792882 - G 70 -4.1 -4.60041 | overlap 4792883 ATCCAGGCCGAAAAA CGCTTTG ATAT CAAAGCT CGGATAGAACAGCGC TERM 6493 4793726 - 4793751 + g 93 -11.3 -4.21141 | gap 1, overlap 4793721 TGCGGCCAGCCGGAG CTGGCAAGATGA ATA TCATCT-GCCAG TTTGATTTGTTCAGG yjcQ 4795928 - 4793877 - | multidrug efflux system component yjcR 4796959 - 4795928 - | membrane fusion protein of efflux pump TERM 6494 4796562 - 4796584 + g 90 -7.6 -4.85599 | CGTAATGTATCTGTG GCCTGTTTCG CGG CGGCACGGGC TTTTTCTACCGTGGC TERM 6495 4797454 - 4797423 - R 84 -8.7 -4.42062 | opp_overlap 4797403, overlap 4797424 4797425 TATTTTTTAAATAAA TGCTTTTGGGGGC TTAAGG GCCCCCAAAAGTG AGTGGCATTAATTTG TERM 6496 4797453 - 4797424 - R 83 -12.2 -3.24755 | opp_overlap 4797403, overlap 4797423 4797425 ATTTTTTAAATAAAT GCTTTTGGGGGC TTAAGG GCCCCCAAAAGT GAGTGGCATTAATTT TERM 6497 4797452 - 4797425 - R 93 -15.7 -2.54371 | overlap 4797424 4797423 TTTTTTAAATAAATG CTTTTGGGGGC TTAAGG GCCCCCAAAAG TGAGTGGCATTAATT yjcS 4799447 - 4797462 - | putative alkyl sulfatase TERM 6498 4797540 - 4797554 + g 70 -5.7 -4.32607 | CAGTTTCGCACCATT GCCAA TAATT TTGGC TTTCTTCGCTTTTAC TERM 6499 4799753 - 4799789 + G 81 -5.8 -4.73613 | overlap 4799754 AATGGGCGGTCATGT CGCTGGCACCGCAG GATTCTGCG TTGCTGTGCCAGCC TTTTATTCATGGTCA TERM 6500 4799754 - 4799788 + G 71 -9.3 -3.43445 | overlap 4799753 ATGGGCGGTCATGTC GCTGGCACCGCAG GATTCTGCG TTGCTGTGCCAGC CTTTTATTCATGGTC TERM 6501 4799865 - 4799884 + G 86 -9.3 -4.41047 | GATTATCCGCATTAC GCCAGTG AAGTTG CACTGGC TTTTGGTTCACGAGT ECUMN_4621 4799700 - 4800017 + | putative ribose-5-phosphate isomerase B (rpiB-like) yjdP 4800086 - 4800415 + | hypothetical protein phnP 4801208 - 4800450 - | carbon-phosphorus lyase complex accessory protein phnO 4801644 - 4801210 - | putative acyltransferase with acyl-CoA N-acyltransferase domain phnN 4802188 - 4801631 - | ribose 1,5-bisphosphokinase phnM 4803324 - 4802188 - | carbon-phosphorus lyase complex subunit TERM 6502 4802940 - 4802955 + g 74 -8.2 -3.97602 | overlap 4802929 4802947 4802952 GCAGGCGGTGCTCGG CGCGGT TGAC GCCGCG TTTCTGCGTCTCTTC phnL 4804001 - 4803321 - | carbon-phosphorus lyase complex subunit phnK 4804870 - 4804112 - | carbon-phosphorus lyase complex subunit phnJ 4805712 - 4804867 - | carbon-phosphorus lyase complex subunit phnI 4806769 - 4805705 - | carbon-phosphorus lyase complex subunit TERM 6503 4806350 - 4806362 + g 78 -10.5 -3.53224 | GGCTGTGGTCAGCGT CGGCG CTT CGCCG TTTGCCAGCAGGGTG phnH 4807353 - 4806769 - | carbon-phosphorus lyase complex subunit TERM 6504 4806956 - 4806942 - G 77 -11.4 -3.14344 | overlap 4806929 TACCCGCGCCAGTAA GGCGCA GCA TGCGCC CGCCGCTCAGGCTGG TERM 6505 4807224 - 4807238 + g 73 -11.4 -2.77043 | overlap 4807223 TGGTGGCGATATTCA GCGGCT GCC AGCCGC GTTTGAGCTGATGCA phnG 4807802 - 4807350 - | carbon-phosphorus lyase complex subunit TERM 6506 4807512 - 4807535 + g 79 -10.2 -3.85698 | CATCAGCGCGTCGAT CAGCGCGCAG CGTT CGGCGTGCTG TTTGTCGCGCCCCAG phnF 4808528 - 4807803 - | putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation TERM 6507 4808044 - 4808023 - G 70 -5.1 -4.36914 | gap 1 TGCTCGCGCAGAAAA TCGTGCAGCG AGC CGCTGT-CGA AGCGTTGCAGCGTCG phnE 4809328 - 4808549 - | phosphonates transport system, permease protein phnD 4810405 - 4809389 - | phosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily TERM 6508 4809458 - 4809477 + g 75 -5.7 -4.60255 | gap 1, overlap 4809460 GTCCAGGTCATCCAG CT-GCGCC TGAAT GGCGCTAG TTTTTGCCAGCTTGT phnC 4811218 - 4810430 - | phosphonate/organophosphate ester transporter subunit ; ATP-binding component of ABC superfamily TERM 6509 4810808 - 4810828 + g 74 -8.9 -3.96327 | CATGCCAACGCGGGT CAGCGCCTG TAA CGCGCGCTG TTTCTGCTCGCGGGT TERM 6510 4810892 - 4810871 - G 72 -10.1 -3.29263 | opp_overlap 4810862 4810863, overlap 4810860 ACAGGTGCGCCAGAA TGGCGTGCT GCCG AGCGCGCCA ATCAGCACGTTCTCC phnB 4811794 - 4811351 - | hypothetical protein TERM 6511 4811658 - 4811677 + g 72 -7.1 -4.24002 | CCGGAAGGGCAGTTC TCGGCGC TGTCCT GCGCTGA TTTTGGCATTTCGCC TERM 6512 4811892 - 4811860 - R 95 -14.2 -3.15708 | opp_overlap 4811871 4811872, overlap 4811869 4811871 4811872 ACAGATGAGAGGGAA GCCTGATAAGACGC GGTCA GCGTCGCATCAGGC AGTCGGCATCGTTGC TERM 6513 4811926 - 4811871 - R 70 -8.9 -3.23447 | gap 2, opp_overlap 4811871 4811872, overlap 4811869 4811860 4811872 GGAAGCCTGATAAGA CGCGGTCAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGC-GAGCGCC TTATCCGGCTTACCG TERM 6514 4811871 - 4811926 + r 95 -13.3 -3.33261 | gap 2, opp_overlap 4811869 4811860 4811871 4811872, overlap 4811872 GGAAGCCTGATAAGA CGCGGTCAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGC-GAGCGCC TTATCCGGCTTACCG TERM 6515 4811925 - 4811872 - R 81 -12.4 -2.53747 | gap 2, opp_overlap 4811871 4811872, overlap 4811869 4811860 4811871 GAAGCCTGATAAGAC GCGGTCAGCGTCGCATCAGGCAGTCG GCAT CGT-TGCCGGATGCGGCGC-GAGCGC CTTATCCGGCTTACC TERM 6516 4811872 - 4811925 + r 100 -16.8 -2.59742 | gap 2, opp_overlap 4811869 4811860 4811872 4811871, overlap 4811871 GAAGCCTGATAAGAC GCGGTCAGCGTCGCATCAGGCAGTCG GCAT CG-TTGCCGGATGCGGCGC-GAGCGC CTTATCCGGCTTACC phnA 4812289 - 4811954 - | hypothetical protein TERM 6517 4812344 - 4812332 - H 93 -9.1 -5.08011 | AAAAGCGCCAAAAAA CGGCA GAT TGCCG AAAAAGGCCGCAATT TERM 6518 4813454 - 4813442 - g 77 -3.4 -5.03314 | CGCATCTGCAAAAAA TGCT TAACC AGCA GCTGGCACGCGCCTC yjdA 4812691 - 4814919 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain yjcZ 4814916 - 4815794 + | hypothetical protein proP 4816058 - 4817560 + | proline/glycine betaine transporter TERM 6519 4817602 - 4817572 - T 81 -12.6 -2.66593 | overlap 4817568 ATAAGCTGAAACGGA TGGCCTGATGTGAC GCT GTCTTATCAGGCCA ATTGAAGTCTTAAGG TERM 6520 4817712 - 4817731 + T 73 -5 -4.65722 | gap 1, overlap 4817715 TAACTACCGTGTTCA GCGTGCTGG TGG TCAGCA-GC TTTCTTTATATCTGG basS 4818828 - 4817737 - | sensory histidine kinase in two-component regulatory system with BasR basR 4819506 - 4818838 - | DNA-binding response regulator in two-component regulatory system with BasS eptA 4821146 - 4819503 - | putative metal dependent hydrolase TERM 6521 4821227 - 4821194 - R 89 -9.7 -4.54727 | opp_overlap 4821198, overlap 4821198 GCTCGCAAAGCAAAA TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT ATGTTTGCTTGATTA TERM 6522 4821223 - 4821198 - R 100 -14.9 -3.78998 | opp_overlap 4821198, overlap 4821194 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTTG TERM 6523 4821198 - 4821223 + r 100 -14.9 -4.84539 | opp_overlap 4821198 4821194 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTTG adiC 4822587 - 4821250 - | arginine/agmatine antiporter adiY 4823485 - 4822724 - | DNA-binding transcriptional activator TERM 6524 4822815 - 4822805 - G 75 -5.4 -4.69487 | opp_overlap 4822803 4822805 AAAGACAGAAATAAA GTAC GAC GTAC TGTTGTAGCCGCAGG TERM 6525 4823703 - 4823685 - R 100 -8.8 -5.85178 | overlap 4823686 AACAGGCAAAAAAAA GCGCGG GGTGGGA CCGCGC AAAAAGCATGACATT TERM 6526 4823704 - 4823686 - R 70 -6.6 -4.08666 | overlap 4823685 ACAGGCAAAAAAAAG CGCGGGGT GGG ACCGCGCA AAAAGCATGACATTT adiA 4826091 - 4823821 - | biodegradative arginine decarboxylase TERM 6527 4824136 - 4824154 + g 90 -7.4 -4.86731 | GGAATAGGCTTCGTT CAACCGTG CGC CAGGGTTG TTTTCTTTCAGCCAG TERM 6528 4824423 - 4824434 + g 72 -7.2 -4.20918 | CTGTGACCAGCGCCG CCGG AACA CCGG TTTCTTCCAGTTCAC TERM 6529 4824631 - 4824642 + g 70 -5.8 -4.20367 | TTTGCCGGTTTGTGG GTCG GTGA CGAC TTCTTTGTTCCACGG TERM 6530 4824967 - 4824957 - G 70 -6.8 -4.07687 | opp_overlap 4824957 AGTGGGTGGCGAAAA CGGT AGG ACCG TTGTGATCGCCAGGT TERM 6531 4826190 - 4826170 - R 76 -6.3 -4.58685 | opp_overlap 4826174 4826184, overlap 4826174 4826185 AAAGCGCGTGAAAAA CAAACATTT TTG AAATGTTTA TTTTTATAAACAATA TERM 6532 4826186 - 4826174 - R 75 -4.9 -4.85782 | opp_overlap 4826174 4826184, overlap 4826170 4826185 CGCGTGAAAAACAAA CATTT TTG AAATG TTTATTTTTATAAAC TERM 6533 4826174 - 4826186 + r 77 -4.9 -4.96501 | opp_overlap 4826174 4826170 4826185, overlap 4826184 CGCGTGAAAAACAAA CATTT TTG AAATG TTTATTTTTATAAAC melR 4827195 - 4826287 - | DNA-binding transcriptional dual regulator TERM 6534 4826640 - 4826626 - G 75 -5.6 -4.66537 | opp_overlap 4826636, overlap 4826628 CTGGCTAACATAAAA TTGCGC ATG GCGCGA GACGCTGTTTTTGTG TERM 6535 4826636 - 4826647 + g 74 -2.2 -5.03994 | gap 1, opp_overlap 4826628 4826626 TAAAATTGCGCATGG C-GCG AGA CGCTG TTTTTGTGTGTGCGC TERM 6536 4828130 - 4828118 - g 70 -6.9 -4.14511 | opp_overlap 4828118 4828120, overlap 4828119 AACTGGAGCGCAAAA CCGCC GAC GGCAG TTACGTGAATCTCTA TERM 6537 4828120 - 4828163 + G 80 -11.6 -3.28712 | opp_overlap 4828118 4828119, overlap 4828118 CTGGAGCGCAAAACC GCCGACGGCAGTTACGTGAA TCTC TACCCGGAACTGCTGGCGGC TTATGAAGCAGGGCA melA 4827478 - 4828833 + | alpha-galactosidase, NAD(P)-binding melB 4828948 - 4830357 + | melibiose:sodium symporter TERM 6538 4830408 - 4830380 - T 76 -6.1 -4.45151 | opp_overlap 4830378 4830380 AATAGCTAACGAAAA TGGCCTGAT GCGATATGTTT ATCAGGCCA TGTCTTAATGTAATG TERM 6539 4830481 - 4830460 - T 71 -8.7 -3.45386 | overlap 4830464 AGACCGGATAAGGAA TTCACGCCG CATC CGGCGTCAA CAAAGCGCACGTTGT yjdF 4831125 - 4830496 - | conserved hypothetical protein; putative inner membrane protein fumB 4832894 - 4831248 - | anaerobic class I fumarate hydratase (fumarase B) TERM 6540 4831868 - 4831883 + g 72 -4.7 -4.66163 | GTGGAATGTACTGGC CTGGA TTGCGT TCCAG TTTTTCGATCCAGAT TERM 6541 4832229 - 4832248 + g 75 -7.2 -4.36914 | gap 1, overlap 4832232 GTACGGCGGGCAGGC TGCCGTACC GAG GGTAC-GCA TTTTCTCAACGAGGA TERM 6542 4832249 - 4832265 + g 73 -3.7 -4.81249 | overlap 4832250 TACCGAGGGTACGCA TTTTCTC AAC GAGGAAG TTTTTCAGTTTGCCG TERM 6543 4832964 - 4832933 - R 78 -8.7 -4.13767 | opp_overlap 4832957 TTTGTTATTCGAAAA TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA AGTGCATTTATAAGA dcuB 4834312 - 4832972 - | C4-dicarboxylate antiporter TERM 6544 4833408 - 4833419 + g 74 -2.2 -5.0538 | GCGATCATACCGGAA CGGA AGAC TTCG TTTTTTGAGATAGAC dcuR 4835602 - 4834883 - | DNA-binding response regulator in two-component regulatory system with DcuS dcuS 4837230 - 4835599 - | sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration TERM 6545 4836048 - 4836035 - G 74 -2.3 -5.14563 | TTGCTGATTAAAAAA CCAGC GATA ACCGG AGATTTGATCTTACC TERM 6546 4836989 - 4837002 + g 88 -5.2 -5.24129 | overlap 4836965 GCGATGGCCTGGATG CCGC TCTCCT GCGG TTTTTTCTGCAAGCC yjdI 4837411 - 4837641 + | hypothetical protein yjdJ 4837653 - 4837925 + | putative acyltransferase with acyl-CoA N-acyltransferase domain yjdK 4838154 - 4838450 + | hypothetical protein TERM 6547 4838620 - 4838630 + G 70 -6.8 -4.01646 | CCTGGCCAATGAGTC TGCC TGT GGCA TTACTTTTTTCTCTC yjdO 4838478 - 4838651 + | hypothetical protein TERM 6548 4838726 - 4838757 + T 100 -16 -3.78351 | opp_overlap 4838694 4838693 4838726 4838730 4838734, overlap 4838715 4838727 GGATTTGCGGAACGA CGAACGAAGCAGTC GCCT GACTGCTTCGTTCA TTTAGTGAAATTTAT TERM 6549 4838757 - 4838726 - T 100 -18.2 -2.71364 | opp_overlap 4838715 4838726 4838727, overlap 4838694 4838693 4838730 4838734 GGATTTGCGGAACGA CGAACGAAGCAGTC GCCT GACTGCTTCGTTCA TTTAGTGAAATTTAT TERM 6550 4838727 - 4838756 + T 100 -19.5 -2.86288 | opp_overlap 4838693 4838726 4838730 4838734, overlap 4838726 4838715 GATTTGCGGAACGAC GAACGAAGCAGTC GCCT GACTGCTTCGTTC ATTTAGTGAAATTTA TERM 6551 4838753 - 4838730 - T 100 -15.4 -3.27298 | opp_overlap 4838727 4838726 4838715, overlap 4838726 4838734 TTGCGGAACGACGAA CGAAGCAGTC GCCT GACTGCTTCG TTCATTTAGTGAAAT TERM 6552 4838749 - 4838734 - T 73 -9 -3.43151 | opp_overlap 4838727 4838726 4838715, overlap 4838730 4838726 GGAACGACGAACGAA GCAGTC GCCT GACTGC TTCGTTCATTTAGTG lysU 4840286 - 4838769 - | lysine tRNA synthetase, inducible yjdL 4841980 - 4840523 - | putative transporter TERM 6553 4841367 - 4841380 + g 79 -2.3 -5.28778 | opp_overlap 4841368, overlap 4841368 GGTAAGGCAAATTTA ACGCT AGTG AGCGC TTTTTTATCCATACT TERM 6554 4842004 - 4842025 + r 100 -14.5 -3.30619 | opp_overlap 4842004 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT TERM 6555 4842025 - 4842004 - R 100 -14.5 -5.1861 | opp_overlap 4842004 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT cadA 4844186 - 4842039 - | lysine decarboxylase 1 TERM 6556 4844248 - 4844209 - R 73 -2.7 -5.08824 | TCTCCAGGTAAAAAA GGCCCCTCCCAACACAT GGGACA AAATGAAAGGAGGAGCC TCGGAAAATACTTTT cadB 4845600 - 4844266 - | putative lysine/cadaverine transporter TERM 6557 4845894 - 4845868 - R 79 -5.1 -5.10461 | opp_overlap 4845866 4845868, overlap 4845869 4845871 TTTATGTAATAAAAA TTATGCGGCAA ATAAA TTGCCGCAACA TATTATACCAACAGG TERM 6558 4845891 - 4845871 - R 83 -11.2 -3.39664 | opp_overlap 4845868 4845866, overlap 4845869 4845868 ATGTAATAAAAATTA TGCGGCAA ATAAA TTGCCGCA ACATATTATACCAAC TERM 6559 4845943 - 4845922 - R 76 -3.7 -5.10968 | AGGAACATACAAAAA CTCAACAAC AAAT ATTGCCGAG CATAAATCAACCCGG cadC 4847504 - 4845966 - | DNA-binding transcriptional activator ECUMN_4668 4847740 - 4848009 + | hypothetical protein TERM 6560 4848108 - 4848089 - T 100 -13.6 -4.98531 | opp_overlap 4848089 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG TERM 6561 4848089 - 4848108 + T 100 -13.6 -4.11295 | opp_overlap 4848089 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG TERM 6562 4848154 - 4848170 + T 74 -10.9 -2.62616 | opp_overlap 4848153 4848151 4848148 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA dipZ 4850602 - 4848905 - | fused thiol:disulfide interchange protein: activator of DsbC ; conserved hypothetical protein cutA 4850916 - 4850578 - | copper binding protein, copper sensitivity TERM 6563 4851021 - 4851003 - R 100 -13.8 -4.41348 | opp_overlap 4851002 4851001 TCGGCGGGAAAGAAA GCGGGGCC TGA AGCCCCGC GATTGATCATTACAG dcuA 4852332 - 4851031 - | C4-dicarboxylate antiporter TERM 6564 4852401 - 4852426 + r 100 -11.9 -4.59342 | opp_overlap 4852404, overlap 4852404 ACTGCTCACAAGAAA AAAGGCACGTC ATCT GACGTGCCTTC TTTATTTGTACTACC TERM 6565 4852423 - 4852404 - R 100 -13.6 -5.55769 | opp_overlap 4852401 4852404 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTCTTTATTTGTACT TERM 6566 4852404 - 4852423 + r 100 -13.6 -4.39652 | opp_overlap 4852404, overlap 4852401 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTCTTTATTTGTACT aspA 4853886 - 4852450 - | aspartate ammonia-lyase TERM 6567 4853315 - 4853327 + g 74 -7.7 -4.13282 | overlap 4853306 ACTGCGTCCTGCAGC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 6568 4853750 - 4853765 + g 71 -2.6 -4.92757 | gap 1, opp_overlap 4853750, overlap 4853745 ATACCGCGAACAAAT TCAG-GA ATA TCACTGA TTTTGTTGTTGCTGA TERM 6569 4854184 - 4854205 + H 71 -9.4 -3.01712 | overlap 4854181 TCGCAACCCATTCAG GTAGCCGG GTTTAA CCGGCTGC TATTACAGGAGAAAC fxsA 4854223 - 4854699 + | inner membrane protein TERM 6570 4854708 - 4854740 + T 79 -4.8 -5.0925 | opp_overlap 4854701 4854708 GGATTAATGTCGAAA CGCCGGATTATG TGGTTATGC CATTTTCCGGCG TTTTTCGTTTTGGCA yjeH 4855971 - 4854715 - | transporter TERM 6571 4855845 - 4855833 - G 77 -6.9 -4.56314 | opp_overlap 4855838, overlap 4855834 CTAAGATAATCAAAA CGGGC CAC GCCCA CAGGCTGTTATTGCC TERM 6572 4855936 - 4855950 + g 70 -7.1 -4.10744 | opp_overlap 4855926 TAGCAGGCCAATGCC CTGGG CCAGC CCCAG TTCTTGTTTGAGTCC groS 4856247 - 4856540 + | Cpn10 chaperonin GroES, small subunit of GroESL groL 4856584 - 4858230 + | Cpn60 chaperonin GroEL, large subunit of GroESL TERM 6573 4858260 - 4858283 + F 100 -12.4 -5.50723 | opp_overlap 4858260 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA TERM 6574 4858283 - 4858260 - f 86 -8 -4.83246 | opp_overlap 4858260 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA yjeI 4858368 - 4858721 + | hypothetical protein yjeJ 4859640 - 4858771 - | hypothetical protein TERM 6575 4859885 - 4859906 + r 79 -7.9 -4.30978 | ATCAGTTACTGCTGG CGTAGCTGG AGAT CCAGCGGCG TTTTGCTGGGTTCGC yjeK 4860903 - 4859875 - | putative lysine aminomutase efp 4860945 - 4861511 + | Elongation factor EF-P TERM 6576 4861516 - 4861547 + T 100 -13 -3.65046 | overlap 4861520 GCGTGAAGTAATGCG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCAGGTCAGAG TERM 6577 4861520 - 4861543 + T 89 -14.6 -2.66106 | overlap 4861516 GAAGTAATGCGGTTG TGGTGCGGCC TGCA GGCTGCACCA TCACTTATTCAGGTC ECUMN_4683 4862034 - 4861783 - | hypothetical protein TERM 6578 4861949 - 4861980 + g 100 -8 -5.44721 | opp_overlap 4861953, overlap 4861953 GCGCAGCAGTAAGCA ATAACGGTACGACA GTTA TGTCGTGCCGTTTG TTTTTTTGCGATAGT TERM 6579 4861976 - 4861953 - G 84 -11 -3.84246 | opp_overlap 4861949 4861953 AGCAGTAAGCAATAA CGGTACGACA GTTA TGTCGTGCCG TTTGTTTTTTTGCGA TERM 6580 4861953 - 4861976 + g 100 -13.2 -5.20328 | opp_overlap 4861953, overlap 4861949 AGCAGTAAGCAATAA CGGTACGACA GTTA TGTCGTGCCG TTTGTTTTTTTGCGA sugE 4862120 - 4862437 + | multidrug efflux system protein blc 4862967 - 4862434 - | outer membrane lipoprotein (lipocalin) TERM 6581 4863045 - 4863028 - R 82 -7.7 -4.46581 | GAAAAGCGGAGAAAA GGTCCAA AAAT TCGGACC CGATGAAATTTTACT ampC 4864189 - 4863056 - | beta-lactamase/D-alanine carboxypeptidase TERM 6582 4864210 - 4864234 + r 100 -12.7 -3.75629 | opp_overlap 4864212, overlap 4864211 CTGGTTTCCATACAA AACGGCCCGCC ATA GGCGGGCCGGA TTTACATTGGCGATG TERM 6583 4864211 - 4864233 + r 100 -16.2 -2.85056 | opp_overlap 4864212, overlap 4864210 TGGTTTCCATACAAA ACGGCCCGCC ATA GGCGGGCCGG ATTTACATTGGCGAT TERM 6584 4864232 - 4864212 - R 100 -19.7 -4.52589 | opp_overlap 4864211 4864210 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCG GATTTACATTGGCGA frdD 4864611 - 4864252 - | fumarate reductase (anaerobic), membrane anchor subunit frdC 4865017 - 4864622 - | fumarate reductase (anaerobic), membrane anchor subunit frdB 4865762 - 4865028 - | fumarate reductase (anaerobic), Fe-S subunit frdA 4867563 - 4865755 - | fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit TERM 6585 4866566 - 4866591 + g 79 -2.6 -5.24129 | gap 1, overlap 4866568 GCTTTCGCCAGTTCG CAG-ATGAACG GCAGA CGTTCATGCAG TTTTTTCTCGCCGAG TERM 6586 4866647 - 4866627 - G 77 -8.9 -4.04206 | opp_overlap 4866628 4866630, overlap 4866630 4866632 GCAGGTCGAGATAAA CCACATCGC CAC GCGGCGTGG AGATGGTGTTGCCTT TERM 6587 4866630 - 4866652 + g 72 -12 -2.51888 | opp_overlap 4866627 4866630 4866632, overlap 4866628 4866651 GGTCGAGATAAACCA CATCGCCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 6588 4866652 - 4866630 - G 75 -12 -3.06418 | opp_overlap 4866630 4866628 4866651, overlap 4866627 4866632 GGTCGAGATAAACCA CATCGCCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 6589 4868692 - 4868704 + G 70 -10.5 -2.71712 | overlap 4868691 CAAGATAACCGTAAG CGCGC GGC GCGCG GTTTGCCGCAGCACC poxA 4867888 - 4868865 + | lysyl-tRNA synthetase TERM 6590 4869125 - 4869104 - g 85 -3 -5.34555 | opp_overlap 4869104 4869106 4869121, overlap 4869106 TCACACGATAAAAAA GATGAGTC TGATAG GACTCATA TTGATGATCTTTACT TERM 6591 4869123 - 4869106 - g 70 -5.6 -4.30057 | opp_overlap 4869106 4869104 4869121, overlap 4869104 ACACGATAAAAAAGA TGAGTC TGATAG GACTCA TATTGATGATCTTTA TERM 6592 4869610 - 4869624 + G 83 -5.8 -4.91084 | ATTTAGTATTGCTGT TAGTAA GCA TTACTA TTTTGTTATTAAATG yjeM 4869084 - 4870586 + | putative transporter TERM 6593 4870636 - 4870597 - T 100 -18.9 -3.74872 | gap 1, opp_overlap 4870605 ACTGATCCTATGAAA TCCTG-CAACTCATCGTC TCTCC GACGATGAGTTGTCAGGA AGTAATGCGTATGGA TERM 6594 4870605 - 4870627 + T 85 -12.1 -3.2963 | opp_overlap 4870597 TATGAAATCCTGCAA CTCATCGTC TCTCC GACGATGAG TTGTCAGGAAGTAAT TERM 6595 4870693 - 4870728 + T 78 -10.6 -3.21912 | gap 1, opp_overlap 4870687 4870705 TGAAGATGATGTTAA GCTGCTAAATGA-GCCA CGT TGACATCATTTGGCAGC TTCATGCATTACAAA yjeP 4874060 - 4870737 - | putative mechanosensitive channel TERM 6596 4871243 - 4871264 + g 72 -5.7 -4.56775 | GATCGCGGATCGTTA CCGTATCGC CAAT GCGAATCGG TTTTTCGAACAGGAT TERM 6597 4872177 - 4872167 - G 75 -4.6 -4.80453 | overlap 4872168 TGAGGATAAAACAAA GCCG TCC CAGC GAACCGGAGAATTCA psd 4875050 - 4874082 - | phosphatidylserine decarboxylase rsgA 4876199 - 4875147 - | ribosome small subunit-dependent GTPase A orn 4876294 - 4876839 + | oligoribonuclease TERM 6598 4876959 - 4876941 - Tf 72 -3.2 -4.9792 | CATTTGAGATAAAAA CTCAAAAA AAA TTTTTTAG GGGGGTTGCAGAGGG TERM 6599 4877092 - 4877076 - Tf 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6600 4877150 - 4877137 - Tf 72 -6.7 -4.28049 | TCCAAAATTTGAAAA GTGCT GCAA AGCAC AGACCACCCAATCGC TERM 6601 4877325 - 4877309 - Tf 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6602 4877436 - 4877420 - Tf 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6603 4877492 - 4877519 + TF 77 -3.4 -5.27206 | gap 1, overlap 4877495 CTCTCAATAAAATAT CCA-CAGCGACGC GAT GCGTTATTGCTGG TTTTTGTTGTCTCTG TERM 6604 4877659 - 4877681 + TF 75 -4.9 -4.78753 | overlap 4877661 4877677 AATTAAGATTTCGTT TTGTCGAGT CGATC ACTTGACGA TTTTATTCGTCTTGA yjeS 4878878 - 4877739 - | putative Fe-S electron transport protein TERM 6605 4878585 - 4878571 - Gf 76 -10 -3.32844 | opp_overlap 4878570 4878569 CGGCCCAGCGCATAA CGGCTA ACA TAGCCG AGTTTGGGGTTTTTC TERM 6606 4879420 - 4879406 - gH 85 -11.4 -3.53012 | GCCTGCTGGCTGAAA CTGGCG CTA CGCCAG GCGCGGTGATCAACG yjeF 4878877 - 4880424 + | putative carbohydrate kinase TERM 6607 4880646 - 4880685 + GF 76 -7.8 -4.17048 | TTGATTTGTACCGCC TCGCCGATCCCGAGGAGC TGGA GTTTATGGGGATCCGCGA TTATTTTGCCAACGA yjeE 4880396 - 4880857 + | ATPase with strong ADP affinity TERM 6608 4881200 - 4881190 - g 72 -6.8 -4.1899 | TGATCTTACCGAAAA CGGT AAA ACCG AAGCGGTGAAGCGGC amiB 4880876 - 4882213 + | N-acetylmuramoyl-l-alanine amidase II TERM 6609 4882445 - 4882418 - g 83 -5.4 -5.14563 | overlap 4882421 TGCGGTATCAAAAAA GATGAGCTGGCG CTGG CGCTGGCTCGTC ATGCCACCAGTAAAA TERM 6610 4883294 - 4883284 - g 77 -8.2 -4.09685 | opp_overlap 4883288 TGCCATTCCGGAAAA CCGC GTG GCGG CGGGGCGCAATCACT TERM 6611 4883513 - 4883480 - g 73 -3.7 -4.78661 | overlap 4883481 ATGCAAAAACCAAAA GCGCCAGAACCGCAG GAAC CTGCACTTGCGGCGA ACAGTCAGAGTTTTG TERM 6612 4883741 - 4883729 - g 74 -3.3 -4.91109 | TCGGCATTAGAAAAA GCGCA GTC TGCCC TGGCGGAATTGGGTA mutL 4882223 - 4884070 + | methyl-directed mismatch repair protein miaA 4884063 - 4885013 + | delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase TERM 6613 4885127 - 4885154 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4885126 4885123, overlap 4885120 AATCTTTACAAGATC CGTTCCTGAACGC ACT GCGT-CGGGAACG TGTTCCAGTTTCTAT hfq 4885099 - 4885407 + | HF-I, host factor for RNA phage Q beta replication TERM 6614 4886377 - 4886365 - g 71 -3.3 -4.77567 | ACGTGTACAAGAAAA CATCG AAG CGGTG AATACGGTTCTTGAA TERM 6615 4886528 - 4886492 - g 90 -9.5 -4.4768 | overlap 4886488 GATGAAGAGAACAAA CCGATCCGTGTCTG-GC TTTCC GCACAGAC-CGGAGCGG GGATACCACAGCTTT hflX 4885484 - 4886764 + | putative GTPase TERM 6616 4887862 - 4887849 - g 75 -5.3 -4.69664 | GAGACGATGGAAAAA GTGTT GGGT AACAC CCGCAAAGTGCTGGT TERM 6617 4888081 - 4888062 - g 81 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC CAAC GCGCAGCG TAACGACTACCAGCG hflK 4886850 - 4888109 + | modulator for HflB protease specific for phage lambda cII repressor hflC 4888112 - 4889116 + | modulator for HflB protease specific for phage lambda cII repressor TERM 6618 4889173 - 4889145 - f 84 -9.6 -4.19678 | gap 1, opp_overlap 4889146, overlap 4889146 GTACAGGTCAATAAA GCCACCG-CATCC TCAG GGATGTCGGTGGT TTTCTTTTTCTATAA TERM 6619 4889172 - 4889146 - f 86 -13.1 -3.11325 | gap 1, opp_overlap 4889146, overlap 4889145 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA TERM 6620 4889146 - 4889172 + F 100 -13.1 -5.38839 | gap 1, opp_overlap 4889145 4889146 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA yjeT 4889198 - 4889395 + | conserved hypothetical protein; putative inner membrane protein TERM 6621 4889869 - 4889859 - g 74 -8.2 -3.86194 | overlap 4889846 4889860 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 6622 4890014 - 4889982 - g 72 -5.6 -4.56775 | opp_overlap 4889982 4890004, overlap 4890005 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4889499 - 4890797 + | adenylosuccinate synthetase TERM 6623 4890852 - 4890886 + F 79 -11.6 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGGTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT nsrR 4891002 - 4891427 + | DNA-binding transcriptional regulator TERM 6624 4891589 - 4891565 - g 75 -5.7 -4.71482 | gap 1, overlap 4891566 ACCAAACGTGAAAAA CCGGCCAGCC GTGATG AGCTGGC-GG TAGAACTGCACATTG TERM 6625 4893804 - 4893793 - g 70 -7.2 -4.08806 | TGAGAAAAAAACGAA GCCG AAAG CGGC GAAGAAAGACGCGAG rnr 4891466 - 4893907 + | exoribonuclease R, RNase R TERM 6626 4893911 - 4893937 + F 79 -11.7 -2.61264 | opp_overlap 4893898, overlap 4893910 GTGGCAGAGTGATCA TTACCCTCTTC AAACA GAAGAGGGTGA ATTATCCGTAGGCCG TERM 6627 4894117 - 4894142 + G 76 -11.1 -3.36492 | overlap 4894118 TCTGTTACCGCTGAT TCACGCCCTTG AGTC CCAGGGCGTGG TTATCCAGTTGGCGA TERM 6628 4894118 - 4894141 + G 76 -12.4 -2.61681 | overlap 4894117 CTGTTACCGCTGATT CACGCCCTTG AGTC CCAGGGCGTG GTTATCCAGTTGGCG TERM 6629 4894212 - 4894182 - g 74 -6 -4.4648 | opp_overlap 4894189 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC CCGTGTGAAGCCAGG rlmB 4893998 - 4894729 + | 23S rRNA (Gm2251)-methyltransferase TERM 6630 4894768 - 4894749 - f 73 -6.4 -4.3534 | opp_overlap 4894750, overlap 4894750 TCTGAATTATGAAAA GCCATCCA GATT TGGATGGT TTTTTTTTGTCTATA TERM 6631 4894767 - 4894750 - f 72 -9.9 -3.20722 | opp_overlap 4894750, overlap 4894749 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTTGTCTAT TERM 6632 4894750 - 4894767 + F 100 -9.9 -6.32216 | opp_overlap 4894750 4894749 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTTGTCTAT yjfI 4894856 - 4895257 + | hypothetical protein yjfJ 4895276 - 4895974 + | putative transcriptional regulator effector protein TERM 6633 4895979 - 4896007 + F 75 -8.9 -3.65542 | overlap 4895977 4895980 AGGGCGAGTAATTTT TTTGCCAGCCT CACTGCA AGGCTGGCAAC TATTTTAAGGATAAA TERM 6634 4895980 - 4896006 + F 82 -12.4 -2.79004 | overlap 4895979 4895977 GGGCGAGTAATTTTT TTGCCAGCCT CACTGCA AGGCTGGCAA CTATTTTAAGGATAA TERM 6635 4896420 - 4896432 + G 77 -3.3 -5.03314 | opp_overlap 4896421, overlap 4896421 AAACTGGCAGGAAAA ACGCT GGC AGCGA TTTTTTAACAGTGAA TERM 6636 4896431 - 4896421 - g 85 -6.8 -4.73388 | opp_overlap 4896420 4896421 AACTGGCAGGAAAAA CGCT GGC AGCG ATTTTTTAACAGTGA TERM 6637 4896513 - 4896501 - g 71 -3.4 -4.74012 | opp_overlap 4896511 AGTAGAAAATCAAAA CCAT GCCAA ATGG GAGGTCCATAATTTT yjfK 4896025 - 4896684 + | hypothetical protein TERM 6638 4897049 - 4897071 + G 72 -5.5 -4.57341 | gap 1, overlap 4897051 4897062 AGGAATGTTTATGGG AACCGCC-GC ACTG GCTGGCGGTA TTTTTAACGCAGCTT TERM 6639 4897051 - 4897069 + G 72 -8.1 -3.90048 | gap 1, overlap 4897049 4897062 GAATGTTTATGGGAA CCGCC-GC ACTG GCTGGCGG TATTTTTAACGCAGC yjfL 4896702 - 4897100 + | conserved hypothetical protein; putative inner membrane protein TERM 6640 4897244 - 4897255 + G 79 -2.2 -5.27779 | gap 1, overlap 4897244 AACGTTGGCGCTAAT G-GGC GGT GCCGC TTTTTTCGTATTGAA TERM 6641 4897388 - 4897400 + G 72 -6.2 -4.39828 | opp_overlap 4897388 4897395 4897396, overlap 4897395 TCATGGCTGGAACAA CGCC AAAGC GGCG TTTTATGCCGATGTT TERM 6642 4897657 - 4897647 - g 80 -5.4 -5.00616 | GGTTCTGGCAAAAAA GAGT CTT ACTC TTCGGGCGGCTTTAC yjfM 4897110 - 4897748 + | hypothetical protein yjfC 4897751 - 4898914 + | putative synthetase/amidase TERM 6643 4898983 - 4898946 - f 95 -14.3 -3.14132 | opp_overlap 4898950 TCTTTCTGTCATGAA TCCATGGCAGTGACCAT ACTA ATGGTGACTGCCATTGA TGGAGGGAGACACAG TERM 6644 4898950 - 4898979 + F 93 -13.7 -3.14132 | opp_overlap 4898946 TCTGTCATGAATCCA TGGCAGTGACCAT ACTA ATGGTGACTGCCA TTGATGGAGGGAGAC TERM 6645 4899344 - 4899356 + G 100 -10.5 -4.66537 | overlap 4899325 CCGGCGCATTTGTGG CGCGC GCG GCGCG TTTTATGTTGCACGC aidB 4898998 - 4900623 + | isovaleryl CoA dehydrogenase TERM 6646 4900715 - 4900684 - T 73 -10 -3.10537 | opp_overlap 4900684 4900685, overlap 4900682 4900694 TATGTGAAAATTATA GGCCGGACAAGGCG CTCG CGCCGCATCCGGCA TTGTTCATTTGCTGT yjfN 4901015 - 4900740 - | hypothetical protein TERM 6647 4900984 - 4901026 + g 76 -3.5 -4.98531 | gap 1 GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA yjfO 4901493 - 4901164 - | hypothetical protein yjfP 4901675 - 4902424 + | putative hydrolase ulaR 4903176 - 4902421 - | DNA-binding transcriptional dual regulator TERM 6648 4903276 - 4903232 - R 71 -8 -3.80551 | gap 1, overlap 4903234 4903235 GAAATAGCCAGGAAA TACTACGCCGGATAGCGCGAA CTAC TCCACGCTATCCGGTATAA-A CGACAGATTACAGGA TERM 6649 4903275 - 4903234 - R 100 -13.1 -3.47762 | overlap 4903232 4903235 AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTAC TCCACGCTATCCGGTATAA ACGACAGATTACAGG TERM 6650 4903274 - 4903235 - R 87 -14.4 -2.67934 | overlap 4903234 4903232 ATAGCCAGGAAATAC TACGCCGGATAGCGCGAA CTAC TCCACGCTATCCGGTATA AACGACAGATTACAG ulaG 4904348 - 4903284 - | putative L-ascorbate 6-phosphate lactonase TERM 6651 4904658 - 4904678 + H 70 -9 -3.24423 | opp_overlap 4904657 TGAGTGCACAACATT CCGGGTGT GTGGA ATACCCGG TTACCTCTTCTTCAG ulaA 4904703 - 4906100 + | L-ascorbate-specific enzyme IIC component of PTS ulaB 4906116 - 4906421 + | L-ascorbate-specific enzyme IIB component of PTS ulaC 4906431 - 4906895 + | L-ascorbate-specific enzyme IIA component of PTS ulaD 4906909 - 4907559 + | 3-keto-L-gulonate 6-phosphate decarboxylase TERM 6652 4907608 - 4907628 + G 90 -14.7 -2.71144 | opp_overlap 4907608 GGCATCTATGAAAAA GCGCTCCCC GCC GGGGAGTGC TGGTTGGAACGGCTG TERM 6653 4907628 - 4907608 - g 100 -12.5 -4.7497 | opp_overlap 4907608 GGCATCTATGAAAAA GCGCTCCCC GCC GGGGAGTGC TGGTTGGAACGGCTG ulaE 4907569 - 4908423 + | L-xylulose 5-phosphate 3-epimerase ulaF 4908423 - 4909109 + | L-ribulose 5-phosphate 4-epimerase TERM 6654 4909198 - 4909181 - T 100 -12.7 -5.75342 | GTTTTTCAAAAAAAA GCCCCCT GCGA AGGGGGC AAAGCAAACTATGGC yjfY 4909514 - 4909239 - | hypothetical protein rpsF 4909841 - 4910236 + | 30S ribosomal subunit protein S6 TERM 6655 4910375 - 4910360 - g 70 -10.4 -3.21099 | TCTGTGCAGGAGGAA GCCGGT TTTC ACCGGC AGGCGTGGTGCCAAA priB 4910243 - 4910557 + | primosomal protein N rpsR 4910562 - 4910789 + | 30S ribosomal subunit protein S18 rplI 4910831 - 4911280 + | 50S ribosomal subunit protein L9 TERM 6656 4911294 - 4911336 + T 89 -8.4 -4.74132 | opp_overlap 4911282 4911306, overlap 4911301 4911306 AATTCGTTATTCAAC GAGACGTAAAAACGCCGACC AGT GGTCGGCGTTTTGCTTTCTA TTTTTCGTCAGGTAT TERM 6657 4911301 - 4911329 + T 100 -16.1 -3.33352 | opp_overlap 4911306, overlap 4911294 4911306 TATTCAACGAGACGT AAAAACGCCGACC AGT GGTCGGCGTTTTG CTTTCTATTTTTCGT TERM 6658 4911306 - 4911324 + T 100 -16 -4.68919 | opp_overlap 4911306, overlap 4911301 4911294 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTCTATTT TERM 6659 4911324 - 4911306 - T 100 -16 -4.72333 | opp_overlap 4911306 4911301 4911294 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTCTATTT yjfZ 4912145 - 4911351 - | hypothetical protein TERM 6660 4912454 - 4912482 + H 79 -6.7 -4.63542 | AAATCATCGATTTTA CCTGGGATTATTA TAT TGCTAATCCCTGG TTTTTAAAAATTGTG TERM 6661 4912717 - 4912762 + H 93 -11.7 -4.12188 | opp_overlap 4912730, overlap 4912718 GGCCTGGTTTATCCG GTGCGCCGTAAAACCCCGTCC TTCA GGGCGGGGATATAAGGCGCGG TTTTCCACCTGATCA TERM 6662 4912718 - 4912761 + H 93 -15.2 -3.06991 | opp_overlap 4912730, overlap 4912717 GCCTGGTTTATCCGG TGCGCCGTAAAACCCCGTCC TTCA GGGCGGGGATATAAGGCGCG GTTTTCCACCTGATC TERM 6663 4912749 - 4912730 - H 86 -10.6 -4.07568 | opp_overlap 4912718 4912717 CGGTGCGCCGTAAAA CCCCGTCC TTCA GGGCGGGG ATATAAGGCGCGGTT TERM 6664 4912768 - 4912781 + H 70 -6.7 -4.01135 | TAAGGCGCGGTTTTC CACCT GATC AGGTG TTTGCTGTTGTTCAA TERM 6665 4913164 - 4913174 + G 75 -4.6 -4.77173 | ACAATGCCTTCCACG CCGG ATA TCGG TTTCTTTTCTCACAG ECUMN_4739 4913086 - 4913232 + | hypothetical protein TERM 6666 4913497 - 4913485 - g 81 -6.3 -4.82901 | GCGGGCTTACAAAAA CTTCT TCC AGAAG CGGGCTGCTTTTCCC TERM 6667 4913555 - 4913524 - g 95 -10.2 -4.65895 | gap 1 TCCCCGATTCAAAAA GCGGGGA-CAGAATG ATG CATTCCGCTACCCGC AGGGCGTTAAGCTCG TERM 6668 4913843 - 4913830 - g 73 -3.8 -4.83615 | overlap 4913839 CAGTTTTCAGAAAAA CCAG AAGAAG CTGG CGAGACTTCAGCGAC ydcM 4913210 - 4914406 + | putative transposase ytfB 4915191 - 4914553 - | putative cell envelope opacity-associated protein TERM 6669 4914632 - 4914662 + g 74 -7.4 -4.13014 | opp_overlap 4914624, overlap 4914633 4914642 4914655 GTATCAATGGTTAAG CCCGTCACCACGCC GCT GGCGTTCTGGCGGA TTTTCACCATCTGCC TERM 6670 4914633 - 4914661 + g 72 -10.9 -3.07487 | opp_overlap 4914624, overlap 4914632 4914642 4914655 TATCAATGGTTAAGC CCGTCACCACGCC GCT GGCGTTCTGGCGG ATTTTCACCATCTGC TERM 6671 4914943 - 4914960 + g 72 -7.7 -3.88232 | opp_overlap 4914945, overlap 4914945 4914949 ATTTTGTGGCGTAAC TAGCTGC GCCC GCAGCTG TTCTTCTGTCGGCGG TERM 6672 4915003 - 4915034 + g 70 -10.8 -2.79796 | CTGAATATCTAACTG CGCTTCACGCGTCA CCAC TGGCGCGTTGGGCG TATCATCAGATGGAA fklB 4915409 - 4916029 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) cycA 4916338 - 4917741 + | D-alanine/D-serine/glycine transporter TERM 6673 4917764 - 4917779 + F 87 -10.4 -4.44187 | opp_overlap 4917764 TTTATAGCTCTGAAA GGCACC TGCG GGTGCC TTTGTCTTTATATAT TERM 6674 4917779 - 4917764 - f 77 -10.4 -3.56643 | opp_overlap 4917764 TTTATAGCTCTGAAA GGCACC TGCG GGTGCC TTTGTCTTTATATAT TERM 6675 4917985 - 4917968 - g 71 -3.4 -4.77036 | gap 1 CGCCAGCATGAAAAA GGC-ACG GTTTA CGTTGCC GAACAGAAGGGAAAA ECUMN_4744 4917875 - 4919038 + | conserved hypothetical protein (exported) TERM 6676 4919998 - 4920021 + G 70 -6.8 -4.08767 | CTGCCGGGTTGCGAC TATTCCTGAT GTTG ATCCGGAATA TTTTCGCCCGCTGAC ECUMN_4745 4919072 - 4920556 + | conserved hypothetical protein, putative exported protein TERM 6677 4920591 - 4920561 - T 100 -17 -3.70853 | opp_overlap 4920565 TGAATGACTGAATAA TCAACGATCCTGCC CAT GTCAGGATCGTTGA TCGAACAAATCACTC TERM 6678 4920565 - 4920587 + T 83 -12 -3.14344 | opp_overlap 4920561 TGACTGAATAATCAA CGATCCTGCC CAT GTCAGGATCG TTGATCGAACAAATC ytfE 4921263 - 4920601 - | regulator of cell morphogenesis and cell wall metabolism ytfF 4922345 - 4921371 - | conserved hypothetical protein; putative inner membrane protein ytfG 4923305 - 4922445 - | NAD(P)H:quinone oxidoreductase ytfH 4923393 - 4923773 + | putative transcriptional regulator TERM 6679 4923800 - 4923776 - T 72 -9.9 -3.21395 | overlap 4923774 ACGTGCGGCATAACA GCCGGATGCGC TGC GCTTATCCGGC CTACGGTTCATGACT TERM 6680 4923848 - 4923830 - T 74 -9.6 -3.30124 | opp_overlap 4923836 4923842 4923843, overlap 4923842 TTGTAGGGCGGATAA GATGCGAC AGC ATCGCATC CGCCAATAAATGCCG TERM 6681 4923842 - 4923870 + T 80 -11 -3.35467 | opp_overlap 4923830 4923842, overlap 4923836 4923843 TAAGATGCGACAGCA TCGCATCCGCCA ATAAA TGCCGGATGCGG TTGATGATTTGTAGG TERM 6682 4923843 - 4923869 + T 81 -12.3 -2.60798 | opp_overlap 4923830 4923842, overlap 4923842 4923836 AAGATGCGACAGCAT CGCATCCGCCA ATAAA TGCCGGATGCG GTTGATGATTTGTAG cpdB 4925845 - 4923902 - | 2':3'-cyclic-nucleotide 2'-phosphodiesterase TERM 6683 4924556 - 4924567 + g 77 -5.8 -4.59773 | opp_overlap 4924556 GGCGGCATTACGGAA GGTC AACT GACC TTTTTCCACCTCCAC cysQ 4926035 - 4926775 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase ytfJ 4927322 - 4926765 - | putative transcriptional regulator ytfK 4927647 - 4927853 + | hypothetical protein TERM 6684 4927900 - 4927876 - T 79 -9.9 -3.73647 | opp_overlap 4927873 4927871 4927878, overlap 4927878 GCTATGCAGTAATAA GACGGCTCCTG ATT CGGGAGCCGTT GATGTTTCTGGGGTT TERM 6685 4927898 - 4927878 - T 93 -12.5 -3.44998 | opp_overlap 4927873 4927871 4927878, overlap 4927876 TATGCAGTAATAAGA CGGCTCCTG ATT CGGGAGCCG TTGATGTTTCTGGGG TERM 6686 4927878 - 4927898 + T 100 -14.7 -3.50335 | opp_overlap 4927878 4927876, overlap 4927873 4927871 TATGCAGTAATAAGA CGGCTCCTG ATT CGGGAGCCG TTGATGTTTCTGGGG ytfL 4929257 - 4927914 - | conserved hypothetical protein; putative inner membrane protein msrA 4930218 - 4929580 - | methionine sulfoxide reductase A TERM 6687 4930349 - 4930362 + H 71 -2.4 -5.06816 | TAGTCTGCTTTTTAA TCCA TATTAC TGGA TTTTTGTTAAGCCGT ytfM 4930424 - 4932157 + | conserved hypothetical protein; putative outer membrane protein and surface antigen TERM 6688 4932764 - 4932753 - g 72 -5.8 -4.43272 | ACCGAAAATTGAAAA TCCG CAGC CGGA TGAAAAACCGCTCGG TERM 6689 4932782 - 4932772 - g 72 -4.6 -4.72986 | opp_overlap 4932773, overlap 4932773 CAGCCGGATGAAAAA CCGC TCG GCGA AACGCTGAAAGATCT TERM 6690 4934288 - 4934249 - g 79 -2.1 -5.22794 | gap 1, overlap 4934252 ATAAGGAGCAAAAAA TCAGCAT-CGGGCCACAC TGTTG GCTTAACCCGAATGCGGA ATTGTGCGTGCCGCA TERM 6691 4935883 - 4935904 + G 70 -10.9 -2.70315 | overlap 4935881 4935880 CTATATCTGGAAGCC GTGTCTGGT GTAG ACCAGGCAC TGGATTTGCTCTATC ytfN 4932154 - 4935933 + | hypothetical protein TERM 6692 4936013 - 4935999 - g 72 -11.4 -2.52834 | opp_overlap 4935998 4935997, overlap 4935975 4935980 4935998 CACTGGATGACCAAT GCCCAG TTA CTGGGC GATTTCAGTATCGAT ytfP 4935936 - 4936277 + | hypothetical protein TERM 6693 4936314 - 4936281 - T 86 -11.1 -3.86312 | opp_overlap 4936287 4936289, overlap 4936286 4936289 AGGGATAAGTAATAA TAAAAGCACGCCACC TTCG GGTGGCGTTGTTTTA TGCGATGTATCTCGC TERM 6694 4936309 - 4936286 - T 82 -6.6 -4.95167 | opp_overlap 4936287 4936289, overlap 4936281 4936289 TAAGTAATAATAAAA GCACGCCACC TTCG GGTGGCGTTG TTTTATGCGATGTAT TERM 6695 4936287 - 4936309 + T 86 -9.9 -4.4195 | gap 1, opp_overlap 4936286 4936281 4936289, overlap 4936289 AAGTAATAATAAAAG CA-CGCCACC TTCG GGTGGCGTTG TTTTATGCGATGTAT TERM 6696 4936289 - 4936306 + T 100 -12.7 -4.32067 | opp_overlap 4936289 4936286 4936281, overlap 4936287 GTAATAATAAAAGCA CGCCACC TTCG GGTGGCG TTGTTTTATGCGATG TERM 6697 4936306 - 4936289 - T 90 -12.7 -3.32865 | opp_overlap 4936287 4936289, overlap 4936286 4936281 GTAATAATAAAAGCA CGCCACC TTCG GGTGGCG TTGTTTTATGCGATG ppa 4937187 - 4936657 - | inorganic pyrophosphatase TERM 6698 4937685 - 4937669 - g 81 -9.5 -4.12902 | GAATTACGTTGAAAA TTGCTGA TGG TCAGCAA AAGCAGGAAAACCAG ytfQ 4937497 - 4938453 + | putative sugar transporter subunit: periplasmic-binding component of ABC superfamily TERM 6699 4938804 - 4938788 - g 72 -8.7 -3.8505 | opp_overlap 4938788, overlap 4938783 ACCAACACCAGGAAA TCCTCCG CAC CGAAGGA TTAAGTAAATTTTTC ytfR 4938763 - 4940265 + | putative sugar transporter subunit: ATP-binding component of ABC superfamily TERM 6700 4940788 - 4940800 + G 76 -9.1 -3.71848 | TCTCTCATGGTTTGG CAGCG GAT CGCTG TTGTTCCTGCCAACG ytfT 4940279 - 4941301 + | putative sugar transporter subunit: membrane component of ABC superfamily TERM 6701 4941305 - 4941329 + G 72 -7.8 -3.97388 | overlap 4941307 GATAAAACGTAACTT GCCGCTGATG ATCAC CATCGGCGTC TTTGTGCTGGGCTAT TERM 6702 4941307 - 4941327 + G 73 -9 -3.57674 | overlap 4941305 TAAAACGTAACTTGC CGCTGATG ATCAC CATCGGCG TCTTTGTGCTGGGCT TERM 6703 4941582 - 4941596 + G 72 -7.8 -3.92143 | overlap 4941536 GTGCTGGTGATGGGC TGTGCC TTT GGCGCA TTTATGGGGCTTTTG yjfF 4941288 - 4942283 + | putative sugar transporter subunit: membrane component of ABC superfamily TERM 6704 4942308 - 4942287 - T 100 -15.9 -4.87665 | GCGCAGCGATAAAAA CGCCTCTCC GTGT GGAGAGGCG CAGGAGATTACGCGT fbp 4943314 - 4942316 - | fructose-1,6-bisphosphatase I TERM 6705 4943259 - 4943282 + g 81 -9.6 -4.09864 | GCAGTGAGCTCACCG GTAGCATGAG AAAA CTCGTGCTGC TTTTCGACAATAAAT mpl 4943490 - 4944863 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 6706 4944920 - 4944887 - T 85 -13.1 -2.69468 | opp_overlap 4944888 4944905 4944906, overlap 4944898 CAGCCTGATATAGCA TTGCCGGATAAGGCG TTTA CGCCGCATCCGGCAT TTGAGCATAGTGCCT TERM 6707 4944888 - 4944919 + T 100 -14.4 -3.58343 | opp_overlap 4944887 4944898, overlap 4944905 4944906 AGCCTGATATAGCAT TGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGAGCATAGTGCC TERM 6708 4944906 - 4944944 + T 74 -11 -2.53255 | opp_overlap 4944898 4944887 4944930, overlap 4944888 4944905 4944941 CGGATAAGGCGTTTA CGCCGCATCCGGCATT TGAGCAT AGTGCCTGATGCGACG CTTGATGCGTCTTAT yjgA 4945565 - 4945014 - | hypothetical protein pmbA 4945659 - 4947011 + | peptidase required for the maturation and secretion of the antibiotic peptide MccB17 TERM 6709 4947037 - 4947016 - f 71 -2.1 -5.14563 | overlap 4947017 CCGGGCAGTAAAAAA CTGGCGCGA CCTG CCGCGCTAT AAACTAAAAAATTAC cybC 4947194 - 4947580 + | soluble cytochrome b562 TERM 6710 4947588 - 4947621 + T 100 -14.7 -3.4072 | overlap 4947589 ATCGTTAATTCCTCA TTTCCCTGTTGCCTG CACT CAGGTAACAGGGAAC TTATCATCGCAAATG TERM 6711 4947589 - 4947620 + T 100 -18.2 -2.64218 | overlap 4947588 TCGTTAATTCCTCAT TTCCCTGTTGCCTG CACT CAGGTAACAGGGAA CTTATCATCGCAAAT nrdG 4948089 - 4947625 - | anaerobic ribonucleotide reductase activating protein TERM 6712 4948172 - 4948139 - R 74 -9.5 -3.34344 | opp_overlap 4948144 4948159, overlap 4948140 GCATCCGGTAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TGGAGCCGTTGCCAA TERM 6713 4948171 - 4948140 - R 84 -13 -2.60392 | opp_overlap 4948144 4948159, overlap 4948139 CATCCGGTAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTGGAGCCGTTGCCA TERM 6714 4948144 - 4948162 + r 80 -11 -3.30124 | opp_overlap 4948140 4948139, overlap 4948159 CGGTAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTGGAG TERM 6715 4948193 - 4948224 + r 82 -10 -3.90112 | opp_overlap 4948189 4948193 4948203, overlap 4948159 4948194 CCGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAGCGCAGA TERM 6716 4948224 - 4948193 - R 79 -12.2 -2.64155 | opp_overlap 4948159 4948193 4948194, overlap 4948189 4948203 CCGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAGCGCAGA TERM 6717 4948194 - 4948223 + r 87 -13.5 -2.93853 | opp_overlap 4948193 4948189 4948203, overlap 4948159 4948193 CGTTGCCAAATGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTGCTTAGCGCAG nrdD 4950385 - 4948247 - | anaerobic ribonucleoside-triphosphate reductase TERM 6718 4950076 - 4950103 + g 77 -6.2 -4.67234 | gap 1, opp_overlap 4950075 4950078, overlap 4950078 TCTGCTCGACCAGAC CACGGATCTCCTG GTT CAGGCGA-CCGCG TTTTTCACGTTCAAT TERM 6719 4950765 - 4950741 - R 91 -10 -4.60797 | TGCTGACAGACAAAA CCCCGGAATG ACAGG CATTCCCGGG GCTTAGCGGATACTT treC 4952434 - 4950779 - | trehalose-6-P hydrolase TERM 6720 4950890 - 4950904 + g 75 -11.4 -3.1247 | GTTGCCGCGCATTTG CCCTGG CTG CCAGGG TTGGATCTCACGGCT TERM 6721 4951493 - 4951481 - G 72 -7.7 -3.87104 | opp_overlap 4951478 GTTACACCAGAACAA GGCAT TCC ATGCC ACGTTGTGCATTCCT TERM 6722 4951785 - 4951772 - G 74 -8.1 -4.07568 | CCCGTCGGTGTAAAA GCGAC GCCC GTCGC CATCCAGGTCTTCAG treB 4953905 - 4952484 - | fused trehalose(maltose)-specific PTS enzyme: IIB component ; IIC component TERM 6723 4953344 - 4953358 + g 91 -5.6 -5.41143 | opp_overlap 4953332 4953337 4953341 4953344, overlap 4953346 GCACGATACCAAGGA TCGGCG TGC CGCCCA TTTTTTTCACCGCTG TERM 6724 4953984 - 4953971 - R 87 -8.1 -4.92239 | GGAAAAATTTAAAAA CGGGA ACGT TCCCG AAACGCAGCGAAGAT treR 4954971 - 4954024 - | DNA-binding transcriptional repressor TERM 6725 4955683 - 4955699 + G 70 -5.1 -4.41348 | ATTCTCGGCGCTATT TCTTACG CCA CGGAAGA TTTATTTGCCGCGGG TERM 6726 4956198 - 4956231 + G 72 -8.1 -4.00038 | GAATGCCTTTCAGCA GGGGATCAGCCGCGT CAGT ATGCTGCTGATTCGC TTTATGCTGGTGATG mgtA 4955350 - 4958046 + | magnesium transporter TERM 6727 4958220 - 4958239 + T 83 -10.7 -3.65827 | opp_overlap 4958220 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA TERM 6728 4958239 - 4958220 - T 78 -10.7 -3.14468 | opp_overlap 4958220 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA yjgF 4958638 - 4958252 - | ketoacid-binding protein TERM 6729 4958667 - 4958692 + r 91 -10.5 -4.63218 | opp_overlap 4958667 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG TERM 6730 4958692 - 4958667 - R 91 -10.5 -4.61231 | opp_overlap 4958667 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG pyrI 4959172 - 4958711 - | aspartate carbamoyltransferase, regulatory subunit pyrB 4960120 - 4959185 - | aspartate carbamoyltransferase, catalytic subunit pyrL 4960258 - 4960124 - | pyrBI operon leader peptide TERM 6731 4960169 - 4960152 - G 100 -12.7 -5.75342 | CCTGGGCAAAAAAAA GCCCCTC GATT GAGGGGC TGGGAATGGGTGATC TERM 6732 4960427 - 4960441 + r 100 -2.8 -5.93252 | TCGGTATCAATAATT GCAG ACATTTC CTGC TTTTTTCTTTTTCAC yjgH 4960934 - 4960539 - | putative mRNA endoribonuclease TERM 6733 4960867 - 4960842 - G 70 -5.3 -4.41348 | overlap 4960849 TTGCCCGGAAACAAA CAGCAAATCGC CGGA GCGAATAGCCG CAGAATAACGATGTT TERM 6734 4961045 - 4961020 - R 78 -5.4 -4.93877 | opp_overlap 4961020 CGTGAGTAAACAAAA CCCAGACATC ATGGGA AATGGCTGGG CTTAATTGAGCGTAG yjgI 4961778 - 4961065 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain yjgJ 4961849 - 4962442 + | putative transcriptional regulator yjgK 4962587 - 4963039 + | hypothetical protein TERM 6735 4963046 - 4963077 + T 79 -9.6 -3.85698 | overlap 4963047 ATGGCGTGATGACTT TTCGCCGTAAAT AACTCCAG ATTTACGGCGAG TTTGTGAAAAGAGCG TERM 6736 4963047 - 4963076 + T 75 -10.9 -2.91276 | overlap 4963046 TGGCGTGATGACTTT TCGCCGTAAAT AACTCCAG ATTTACGGCGA GTTTGTGAAAAGAGC TERM 6737 4963391 - 4963377 - T 71 -7.8 -3.74693 | GTGGATTTTAGCAAA CGCTCC AAC GAAGCG GGTAGAAATATGATG TERM 6738 4964774 - 4964805 + T 86 -10.9 -3.88787 | opp_overlap 4964773 TGCATAAAATAATGT GATGCCGGGATGT TTTTGT ATTTCCCGGCATC TTTATAGCGATATCA argI 4965826 - 4964822 - | ornithine carbamoyltransferase 1 yjgD 4965988 - 4966404 + | hypothetical protein TERM 6739 4966444 - 4966419 - T 86 -9.7 -4.31379 | opp_overlap 4966419 ATTAATTGATTAAAA TGCCCGATAGC ACAC ACTAGCGGGCA TTTTTTTAGAGTTCG TERM 6740 4966419 - 4966444 + T 100 -9 -5.47399 | opp_overlap 4966419 ATTAATTGATTAAAA TGCCCGATAG CACACA CTAGCGGGCA TTTTTTTAGAGTTCG yjgM 4966953 - 4966450 - | putative acetyltransferase TERM 6741 4968300 - 4968289 - g 70 -5.8 -4.17263 | GAACAACCAGATAAA GGCT TCTT AGCC AGGATTTCACGGGGA yjgN 4967146 - 4968342 + | conserved hypothetical protein; putative inner membrane protein TERM 6742 4968350 - 4968377 + T 89 -9.8 -4.48333 | opp_overlap 4968354, overlap 4968354 TTCTGTAAGAGATAA AAAAGGCCGGAG CATG CTCCGGCCTTCG TTTTCATTACTGTGT TERM 6743 4968373 - 4968354 - T 100 -15 -5.47431 | opp_overlap 4968350 4968354 GTAAGAGATAAAAAA GGCCGGAG CATG CTCCGGCC TTCGTTTTCATTACT TERM 6744 4968354 - 4968373 + T 100 -15 -3.76321 | opp_overlap 4968354, overlap 4968350 GTAAGAGATAAAAAA GGCCGGAG CATG CTCCGGCC TTCGTTTTCATTACT valS 4971253 - 4968398 - | valyl-tRNA synthetase TERM 6745 4969758 - 4969778 + g 74 -7.5 -4.07568 | overlap 4969760 ACGCTGGTTGGGTGG AACTGACGC AGG GCGTCGGTA TTTTCCGGCCAGCCA TERM 6746 4969760 - 4969776 + g 77 -10.1 -3.63744 | overlap 4969758 GCTGGTTGGGTGGAA CTGACGC AGG GCGTCGG TATTTTCCGGCCAGC TERM 6747 4971022 - 4971038 + g 72 -4.3 -4.62783 | overlap 4971025 CGGCGTGGTCAGTAC CGACCTG CCA CAGGGTG TTTTTGCCCTGCATG holC 4971696 - 4971253 - | DNA polymerase III, chi subunit TERM 6748 4971417 - 4971435 + g 70 -4.5 -4.56597 | gap 1, opp_overlap 4971417 GACTAATCAATATAT CGC-GCGG GCTG CTGCTGCG TTTTTGCGGCCAGGC TERM 6749 4971742 - 4971787 + r 71 -9.8 -3.12606 | opp_overlap 4971727 4971742, overlap 4971740 4971758 4971768 CGCATCAGGTATACA C-CGCAGCGCCTGATGCGACGC TGCC GCGTCTTATCAGGC-CTACGAG TTCGGTGCTGTGTAG TERM 6750 4971786 - 4971742 - R 80 -12.2 -2.92463 | gap 1, opp_overlap 4971740 4971742 4971758 4971768, overlap 4971727 CGCATCAGGTATACA CCGCAGCGCCTGATGCGACGC TGCC GCGTCTTATCAGGC-CTACGA GTTCGGTGCTGTGTA TERM 6751 4971768 - 4971815 + r 70 -9.3 -3.14931 | gap 1, opp_overlap 4971742, overlap 4971740 4971758 4971742 4971793 GATGCGACGCTGCCG CGTCTTATCAGGCCTACG-AGT TCGGT GCTGTGTAGGTCGGATAAGGCG TTCATGCCGCATCCG pepA 4973463 - 4971952 - | aminopeptidase A, a cyteinylglycinase TERM 6752 4972001 - 4972026 + g 77 -6.7 -4.54727 | opp_overlap 4972003, overlap 4972002 4972003 AGGAACTGTGCCAGC AACGCTACCGG ACGA CCGGTGGCGCC TTTTGCTTTACCAGA TERM 6753 4972002 - 4972025 + g 72 -10.2 -3.32354 | opp_overlap 4972003, overlap 4972001 4972003 GGAACTGTGCCAGCA ACGCTACCGG ACGA CCGGTGGCGC CTTTTGCTTTACCAG TERM 6754 4972003 - 4972024 + g 84 -13.7 -2.5893 | opp_overlap 4972003, overlap 4972002 4972001 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTGGCG CCTTTTGCTTTACCA TERM 6755 4972024 - 4972003 - G 77 -11.5 -3.14881 | opp_overlap 4972002 4972001 4972003 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTGGCG CCTTTTGCTTTACCA TERM 6756 4974620 - 4974651 + G 75 -4.4 -4.73613 | gap 1, overlap 4974623 TCAGGGACGCGTACT GTCGATGCTGCCAGC CAT GCTG-CTGTATCTAC TTTTCTTCCTGATCC yjgP 4973730 - 4974830 + | conserved hypothetical protein; putative inner membrane protein yjgQ 4974830 - 4975912 + | conserved hypothetical protein; putative inner membrane protein TERM 6757 4975926 - 4975949 + T 100 -14 -3.9461 | opp_overlap 4975926 4975930, overlap 4975930 AACCGAATGAACGAA TAAAGGGAGC GAAA GCTCCCTTTA TTATTGTTAGCAAAG TERM 6758 4975949 - 4975926 - T 100 -14 -3.46482 | opp_overlap 4975926 4975930, overlap 4975930 AACCGAATGAACGAA TAAAGGGAGC GAAA GCTCCCTTTA TTATTGTTAGCAAAG TERM 6759 4975945 - 4975930 - T 87 -10.4 -4.36343 | opp_overlap 4975930 4975926, overlap 4975926 GAATGAACGAATAAA GGGAGC GAAA GCTCCC TTTATTATTGTTAGC TERM 6760 4975930 - 4975945 + T 89 -10.4 -4.57882 | opp_overlap 4975926 4975930, overlap 4975926 GAATGAACGAATAAA GGGAGC GAAA GCTCCC TTTATTATTGTTAGC yjgR 4977575 - 4976073 - | putative ATPase idnR 4978651 - 4977653 - | DNA-binding transcriptional repressor, 5-gluconate-binding idnT 4980037 - 4978718 - | L-idonate and D-gluconate transporter TERM 6761 4980084 - 4980067 - R 100 -12.7 -4.3898 | ATTAGTGCCAGAAAA GCAGCGC TTTC GCGCTGC ACGTAGGGGGGCTGT idnO 4980863 - 4980099 - | 5-keto-D-gluconate-5-reductase TERM 6762 4980571 - 4980585 + g 73 -9.2 -3.61398 | GTAAAAGGATGACGG CGCTGG ATA CCGGCG TTATTCACCAGCACA TERM 6763 4980696 - 4980707 + g 81 -5.8 -4.82901 | overlap 4980695 AACGGCCTGAATACC CTCC TGGT GGAG TTTTTCTACAGCAAG idnD 4981918 - 4980887 - | L-idonate 5-dehydrogenase, NAD-binding idnK 4982135 - 4982698 + | D-gluconate kinase, thermosensitive yjgB 4983721 - 4982702 - | putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding TERM 6764 4983832 - 4983816 - R 71 -9.5 -3.05596 | CATCGCTGTATGCAA TGCTGAA AAT TTCAGCA CTTAGCGAGGTGCGA ECUMN_4802 4984023 - 4983796 - | hypothetical protein TERM 6765 4984016 - 4984031 + g 100 -9 -5.64274 | opp_overlap 4984014 4984005 4984016 AAAAGTATGTAAATA GACCTC AACT GAGGTC TTTTTTTATGCCTGA TERM 6766 4984031 - 4984016 - G 71 -9 -3.45527 | opp_overlap 4984016, overlap 4984014 4984005 AAAAGTATGTAAATA GACCTC AACT GAGGTC TTTTTTTATGCCTGA TERM 6767 4984534 - 4984519 - g 77 -3.2 -5.1356 | TGGCACCAATAAAAA GTGGTC TGAA GATCAC GCCCATCGTGTGCTA TERM 6768 4985031 - 4985019 - g 84 -7.7 -4.61633 | opp_overlap 4985019 4985007 ATAGAGGCTCAAAAA TGCGT ACA ACGCA TCTAGTGCCTCTTTC intB 4984262 - 4985452 + | putative integrase; KpLE2 phage-like element TERM 6769 4985455 - 4985476 + T 91 -11.5 -3.82592 | opp_overlap 4985453 4985449 4985447 4985456, overlap 4985456 4985470 ATTAAAACAGTAATC ATCCCGGGC AAAT GCCCGGGAA TTATTCTAGGATTAT TERM 6770 4985475 - 4985456 - T 89 -15 -2.89607 | opp_overlap 4985455 4985456 4985470, overlap 4985453 4985449 4985447 TTAAAACAGTAATCA TCCCGGGC AAAT GCCCGGGA ATTATTCTAGGATTA TERM 6771 4985456 - 4985475 + T 89 -15 -2.88832 | opp_overlap 4985456 4985453 4985449 4985447, overlap 4985455 4985470 TTAAAACAGTAATCA TCCCGGGC AAAT GCCCGGGA ATTATTCTAGGATTA insB 4986129 - 4985626 - | IS1 transposase InsAB'; CP4-6 prophage insA 4986323 - 4986048 - | IS1 repressor protein InsA cat 4987136 - 4986477 - | Chloramphenicol acetyltransferase TERM 6772 4986690 - 4986673 - G 70 -4.9 -4.55128 | gap 1, overlap 4986675 4986682 ACGTTTAAATCAAAA CT-GGTGA AAC TCACCCAG GGATTGGCTGAGACG TERM 6773 4987089 - 4987123 + g 93 -2.3 -5.68039 | gap 1, overlap 4987090 ATGTTCTTTACGATG CCATTGGGATATATCA ACGG TGGTATATC-CAGTGA TTTTTTTCTCCATTT TERM 6774 4987274 - 4987299 + G 71 -3.2 -4.73677 | opp_overlap 4987260 AGTTGGCCCAGGGCT TCCCGGTATC AACAGG GACACCAGGA TTTATTTATTCTGCG ECUMN_4807 4987190 - 4987381 + | hypothetical protein insA 4987415 - 4987690 + | IS1 repressor protein InsA insB 4987609 - 4988097 + | IS1 transposase InsAB'; CP4-6 prophage TERM 6775 4988100 - 4988123 + TF 73 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 6776 4988427 - 4988451 + GT 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 6777 4988582 - 4988561 - gT 72 -7.9 -3.98172 | gap 1, opp_overlap 4988561 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC ECUMN_4811 4991865 - 4988794 - | transposase TnpA, Tn21 ECUMN_4810 4988126 - 4988848 + | Transposase, IS26 TERM 6778 4990195 - 4990211 + gT 74 -10.8 -2.73875 | overlap 4990191 CGCGGTGTCGGGCAC CGCCGC ATCCA GCGGCG TGATCTTCAAGCCCG TERM 6779 4990807 - 4990836 + gT 72 -10 -2.84574 | gap 1, opp_overlap 4990806 4990803, overlap 4990805 ATCCCAGGACATGAC GGCCTCGATGGCG GCAAA CGC-ATCGCGGCC TGATTGCTTGGCGTC ECUMN_4812 4992428 - 4991868 - | Resolvase transposon Tn21 ECUMN_4813 4993168 - 4992554 - | Protein TnpM, transposon Tn21 TERM 6780 4992809 - 4992782 - GR 70 -9 -3.14564 | overlap 4992791 CCATTGGTTGACGAA GCCGACGAAGGC CGCC GCCGGCATCGGC CTGGCGAACAGGAAA ECUMN_4814 4994120 - 4993107 - | Integrase/recombinase (E2 protein) aadA 4994882 - 4995670 + | Streptomycin 3''-adenylyltransferase TERM 6781 4995859 - 4995882 + F 73 -6 -4.30576 | CTGTTGCAAATAGTC GGTGGTGATA AACT TATCATCCCC TTTTGCTGATGGAGC TERM 6782 4996186 - 4996210 + G 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 6783 4996341 - 4996320 - g 72 -7.9 -3.98172 | gap 1, opp_overlap 4996320 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC ECUMN_4817 4995885 - 4996607 + | Transposase, IS26 ECUMN_4818 4997945 - 4996740 - | putative chromate ion transporter TERM 6784 4997917 - 4997904 - G 73 -3.8 -4.80417 | opp_overlap 4997904, overlap 4997906 CAGAAAAATAAGAAA GACC GACCAT GGTC TGCTGTCATCGGTAG TERM 6785 4998074 - 4998099 + r 73 -4.7 -4.75954 | gap 1, opp_overlap 4998074 GTGGCTTTCACAGGA GCACGCTTA-CT TAC GGCTTAGCGTGC TTTATTTTCCGTTTT sulI 4999271 - 4998432 - | Dihydropteroate synthase type-1 TERM 6786 4998765 - 4998741 - G 93 -8.5 -5.06414 | overlap 4998742 GGGGCTCAAGAAAAA TCCCATCCCCG GAT CGAGGATGAGC CGGTCGGCAGCGACC TERM 6787 4998764 - 4998742 - G 85 -12 -3.63367 | overlap 4998741 GGGCTCAAGAAAAAT CCCATCCCCG GAT CGAGGATGAG CCGGTCGGCAGCGAC TERM 6788 4999194 - 4999216 + g 81 -13.4 -2.78384 | CGCCGCGGTGACAGC GCCGGCGG GGTCTAG CCGCCGGC TCTCATCGAAGAAGG ebr 4999612 - 4999265 - | putative ethidium bromide resistance protein ECUMN_4822 5000431 - 4999709 - | Transposase, IS26 TERM 6789 4999975 - 4999996 + g 72 -7.9 -3.98172 | gap 1, opp_overlap 4999975 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 6790 5000130 - 5000106 - G 81 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 6791 5000457 - 5000434 - R 73 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG TERM 6792 5000502 - 5000483 - R 89 -12.2 -3.63341 | AACAGTGCCCAATAA CGTGATCG AGGC CGATCACG GAAAGCTCAAGATAC TERM 6793 5000604 - 5000655 + r 90 -12.8 -3.29043 | opp_overlap 5000587 5000604 5000607 5000609 CGAGCCCTGCGCAAA GGACAGGCTCGCCCCTGGTGCCTG CAGC CCGGCATCAGGGGCGAGGTGCGCC TTGTGGAGAGAGCTT TERM 6794 5000654 - 5000604 - R 93 -12.5 -3.53444 | gap 1, opp_overlap 5000604, overlap 5000587 5000607 5000609 CGAGCCCTGCGCAAA GGACAGGCTCGCCCCTGGTGCCTG CAGC CCGGCATCAGGGGCGAGG-TGCGC CTTGTGGAGAGAGCT TERM 6795 5000651 - 5000607 - R 89 -15 -2.90496 | gap 1, opp_overlap 5000604, overlap 5000587 5000604 5000609 GCCCTGCGCAAAGGA CAGGCTCGCCCCTGGTGCCTG CAGC CCGGCATCAGGGGCGAGG-TG CGCCTTGTGGAGAGA TERM 6796 5000650 - 5000609 - R 89 -14.3 -3.00525 | opp_overlap 5000604, overlap 5000587 5000607 5000604 CCTGCGCAAAGGACA GGCTCGCCCCTGGTGCCTG CAGC CCGGCATCAGGGGCGAGGT GCGCCTTGTGGAGAG ECUMN_4824 5001288 - 5000932 - | hypothetical protein from plasmid origin mphR 5001818 - 5001234 - | regulator of macrolide 2'-phosphotransferase I ECUMN_4826 5003056 - 5001818 - | conserved hypothetical protein mrx TERM 6797 5001845 - 5001869 + g 76 -12.7 -2.58579 | overlap 5001844 TTCTGTATGGGTTGG GGCGGAGGCTG TGG CTGCCGCCGCC ATTGTAGCAAATTGA TERM 6798 5002440 - 5002428 - G 70 -4.7 -4.52589 | overlap 5002429 TCGCTCCAGAGAAAA GCGAC GCC GGCGC GCATGGAGAGAGTCG TERM 6799 5003057 - 5003092 + r 77 -11.2 -2.80699 | gap 1, overlap 5003053 5003051 TCGACGTTCGCTCAT TC-CGCTGCGGCGAG CTGCGCC TTCGCCGCAGCGAGG TACTCTTCGTTACCC mphA 5003958 - 5003053 - | macrolide 2'-phosphotransferase I TERM 6800 5003300 - 5003253 - G 73 -9 -3.57908 | gap 1 CACCAAAGACCATAA GGTGCGCGGCC-ATGTCGATGGC AGG GTCATCAACGCGGGCCTCGCTCC AGTCGATCATCCCGC TERM 6801 5003414 - 5003384 - G 74 -8.3 -3.93963 | gap 1, opp_overlap 5003413, overlap 5003385 ACCACCACGGAGAAA TCTGGCCACGACGA ATCG TCGTCG-AGCCAGC GCTGCCACCGGTGGA TERM 6802 5003413 - 5003385 - G 75 -11.8 -2.95896 | gap 1, overlap 5003384 CCACCACGGAGAAAT CTGGCCACGACGA ATCG TCGTCG-AGCCAG CGCTGCCACCGGTGG ECUMN_4828 5004802 - 5004080 - | Transposase, IS26 TERM 6803 5004346 - 5004367 + g 72 -7.9 -3.98172 | gap 1, opp_overlap 5004346 GTTTGAGCAGAGCAA GCGCGCGACC ATA GG-CGGGCGC TTTATCCGTGTTGAT TERM 6804 5004501 - 5004477 - G 81 -5 -5.05601 | gap 1 GAGGAGAGATAAAAA TCGACAGTGCG GCCC CGG-CTGTCGA CGGCCCGGTACAGAT TERM 6805 5004828 - 5004805 - H 73 -6 -4.30576 | GCTCCATCAGCAAAA GGGGATGATA AGTT TATCACCACC GACTATTTGCAACAG bla 5005369 - 5006229 + | Beta-lactamase TEM precursor (penicillinase) TERM 6806 5006294 - 5006311 + T 76 -5.6 -4.79223 | opp_overlap 5006294 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA insB 5007289 - 5006786 - | IS1 transposase InsAB'; CP4-6 prophage insA 5007483 - 5007208 - | IS1 repressor protein InsA TERM 6807 5007576 - 5007561 - R 77 -3.2 -5.27923 | overlap 5007562 TAACCTCATAAAAAA TCCTGT ACTC ACAGGG TGATGCGGGATAACT ECUMN_4836 5009011 - 5008544 - | hypothetical protein ECUMN_4837 5009146 - 5009340 + | conserved hypothetical protein from bacteriophage origin ECUMN_4838 5009394 - 5009615 + | conserved hypothetical protein from bacteriophage origin ECUMN_4839 5010044 - 5010187 + | hypothetical protein TERM 6808 5010204 - 5010233 + T 88 -9.3 -4.59109 | overlap 5010206 CATCTTGGTTCTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 6809 5010206 - 5010231 + T 100 -16.3 -3.90762 | overlap 5010204 TCTTGGTTCTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG insG 5011561 - 5010215 - | putative IS4 transposase; KpLE2 phage-like element TERM 6810 5011551 - 5011576 + g 73 -9.1 -3.61398 | opp_overlap 5011551 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC TERM 6811 5011576 - 5011551 - G 100 -9.8 -5.61596 | opp_overlap 5011551 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC yjhB 5012170 - 5013387 + | putative transporter; KpLE2 phage-like element yjhC 5013399 - 5014517 + | putative oxidoreductase; KpLE2 phage-like element TERM 6812 5014526 - 5014551 + TF 74 -5.4 -4.62984 | opp_overlap 5014526, overlap 5014527 AATGTAAAAACTATA CGCCTCTTGA TTTAAT TCAGGAGGCC TTTTATGTATGATCA TERM 6813 5014527 - 5014550 + TF 71 -8.9 -3.37067 | opp_overlap 5014526, overlap 5014526 ATGTAAAAACTATAC GCCTCTTGA TTTAAT TCAGGAGGC CTTTTATGTATGATC ECUMN_4843 5015133 - 5014738 - | conserved hypothetical protein from bacteriophage origin ECUMN_4844 5014973 - 5015221 + | hypothetical protein TERM 6814 5015716 - 5015696 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 6815 5016068 - 5016057 - g 77 -5.8 -4.63218 | opp_overlap 5016062 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG ECUMN_4846 5015637 - 5016476 + | transposase ORF B, IS911 TERM 6816 5016879 - 5016859 - T 79 -8.9 -3.88232 | opp_overlap 5016858 5016860, overlap 5016860 CGGCCGAGATAATAA TTGCCGCCC CCA GGACGGCAT GTTGCTATTAACGAA TERM 6817 5016860 - 5016878 + T 74 -10.2 -3.25073 | opp_overlap 5016859 5016860, overlap 5016858 GGCCGAGATAATAAT TGCCGCCC CCA GGACGGCA TGTTGCTATTAACGA TERM 6818 5016878 - 5016860 - T 82 -12.4 -2.92618 | opp_overlap 5016860 5016858, overlap 5016859 GGCCGAGATAATAAT TGCCGCCC CCA GGACGGCA TGTTGCTATTAACGA ECUMN_4848 5018890 - 5016887 - | betaine-carnitine-choline transporter family member BetU ECUMN_4849 5019856 - 5019038 - | transposase ORF B, IS600 insI 5021092 - 5019941 - | IS30 transposase; KpLE2 phage-like element TERM 6819 5021073 - 5021056 - GR 81 -7 -4.64766 | opp_overlap 5021058 TCCATAGTTCAAAAA CAGAGG CTTTTT CCTCTG CTGTAAATGTTCGTC insM 5021417 - 5021049 - | transposase ORF A, IS600 TERM 6820 5021509 - 5021489 - g 75 -4.6 -4.7373 | CTACCTCAGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 6821 5021861 - 5021850 - g 77 -5.8 -4.63218 | opp_overlap 5021855 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG insO 5021433 - 5022029 + | transposase ORF B (fragment), IS911 TERM 6822 5022211 - 5022196 - g 76 -9 -3.71552 | ACCGCACGAATATAA TGGTGG GTTA CCACCA AACGAATCAGAAAAC yjhV 5022195 - 5022608 + | conserved hypothetical protein; KpLE2 phage-like element TERM 6823 5022799 - 5022821 + TF 87 -6.2 -5.21709 | overlap 5022800 ACCAGCTCCGTGAAT GTCCGCTCTG GCA CAGAGCGAAA TTTTTTGATCTCCCC TERM 6824 5022800 - 5022820 + TF 79 -9.7 -3.72302 | overlap 5022799 CCAGCTCCGTGAATG TCCGCTCTG GCA CAGAGCGAA ATTTTTTGATCTCCC TERM 6825 5023102 - 5023084 - Tf 72 -7.4 -4.10657 | opp_overlap 5023095 TCAGAGTCCGGAAAA GTTCAGCC CCA GTCTGAAC AGGCTTGCTGGCGCC fecE 5023932 - 5023165 - | iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element ECUMN_4856 5023736 - 5023900 + | hypothetical protein fecD 5024889 - 5023933 - | iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element fecC 5025884 - 5024886 - | iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element TERM 6826 5025863 - 5025833 - G 93 -11.8 -4.22309 | overlap 5025830 AGAAAATAATAATAA GTGCTGCAACGGGA AGC CCCCACAGCAGCAC CGGGTGTTTTATCGC fecB 5026783 - 5025881 - | iron-dicitrate transporter subunit ; periplasmic-binding component of ABC superfamily; KpLE2 phage-like element TERM 6827 5026658 - 5026677 + g 86 -6.4 -5.07567 | overlap 5026660 GAACGAGAGTTCCAG CACCACAA TCCG TTGTGGCG TTTTTTCGAGTGTAA TERM 6828 5026818 - 5026803 - R 95 -11.8 -4.19258 | ACATTCCAGCTAAAA GCCCGG CAAG CCGGGC GTTAACACATCAGAA fecA 5029152 - 5026828 - | ferric citrate outer membrane transporter; KpLE2 phage-like element fecR 5030192 - 5029239 - | transmembrane signal transducer for ferric citrate transport; KpLE2 phage-like element fecI 5030710 - 5030189 - | RNA polymerase, sigma 19 factor; KpLE2 phage-like element insA 5031002 - 5031277 + | IS1 repressor protein InsA; KpLE2 phage-like element ECUMN_4866 5033072 - 5032881 - | hypothetical protein TERM 6829 5033660 - 5033646 - g 85 -11.4 -3.57144 | CTGTTCACCGGTAAA CAGGGC GAT GCCCTG ACATTCGCAACCATT TERM 6830 5033736 - 5033720 - g 70 -3.7 -4.6856 | GAAAGAGGGGAAAAA CGAAACT AAA ATTTTCG TTACGCCAGATTTCG TERM 6831 5034288 - 5034256 - g 70 -4.1 -4.66833 | gap 1 CGGCAAGCGGAAAAA CCGCGATGTACGGT TATCCT ATCG-ACAGCGCGG CCTACAGCAAAAACA TERM 6832 5034312 - 5034302 - g 71 -3.2 -4.8048 | GGCCTACAGCAAAAA CAGC GAC GCTA AAATCGGAGACATCG ECUMN_4867 5033436 - 5034809 + | conserved hypothetical protein; putative exported protein ECUMN_4868 5036433 - 5035048 - | conserved hypothetical protein, putative transposase TERM 6833 5036433 - 5036456 + r 73 -9 -3.48276 | gap 1, opp_overlap 5036436, overlap 5036436 AAGAGATGTCGTTCA TAAGCCCG-TA TTT TACCGGGCTTA TTCTGTGACAACCAG ECUMN_4869 5036830 - 5036483 - | conserved hypothetical protein, putative transposase ORF2, IS66 family ECUMN_4870 5037228 - 5036827 - | conserved hypothetical protein, putative transposase, IS3 family TERM 6834 5037239 - 5037249 + r 70 -6.8 -4.14541 | overlap 5037237 5037242 CCCACTACTTATTTG GTGG ACA CCAC TTTGTCTAATTCGTC TERM 6835 5037579 - 5037559 - R 73 -10.5 -3.05384 | opp_overlap 5037558 5037559 CTGCTCCGGAGGCAA CCATTACAG CCT CTGTAACGG ATTATCAGCCCTGGC ECUMN_4871 5038083 - 5037562 - | hypothetical protein ECUMN_4872 5038391 - 5037984 - | hypothetical protein ECUMN_4873 5039250 - 5038645 - | hypothetical protein TERM 6836 5038671 - 5038689 + g 74 -8.8 -3.87318 | TACAGCCAAAATTGC GCTCACCG GTG CAGTGAGC TTTGGTATACTCCTT TERM 6837 5039243 - 5039223 - G 70 -10.5 -2.74263 | overlap 5039222 AGGTCATGGTTAAAT CTCCGTATG GTT CATACGGAA TAGCCACGTCGTAAA TERM 6838 5039392 - 5039382 - R 71 -2.4 -5.15969 | TTTTAATGTAAAAAA CCGG TTA CGGG TAAGGCTGTGAGGAG ECUMN_4875 5039995 - 5039828 - | hypothetical protein from bacteriophage origin TERM 6839 5040863 - 5040840 - g 100 -13.9 -3.83169 | overlap 5040831 TACAAACTCATCAAA GATGGGGGC TTTCCT GCCCCCATC AAAATGGGGCGCAGC ECUMN_4876 5040543 - 5040944 + | conserved hypothetical protein; putative InterPro motifs Prophage CP4-57 regulatory protein (AlpA) TERM 6840 5040993 - 5041013 + F 73 -8.9 -3.49475 | opp_overlap 5040982, overlap 5040991 5040995 GTAATCTCCGGCCTG CCGGCGGCA TTC TGCTGCCTG TTATATCCCCGTGAG TERM 6841 5040995 - 5041011 + F 76 -10.1 -3.32202 | opp_overlap 5040982, overlap 5040991 5040993 AATCTCCGGCCTGCC GGCGGCA TTC TGCTGCC TGTTATATCCCCGTG ECUMN_4877 5041024 - 5041641 + | hypothetical protein ECUMN_4878 5043516 - 5041963 - | conserved hypothetical protein from bacteriophage origin TERM 6842 5042383 - 5042401 + g 79 -3.8 -5.14525 | opp_overlap 5042383, overlap 5042386 GAAATACTGAAATAA CGCTGCAA TTC TTGCAATG TTTTCTGTTTTTTTT TERM 6843 5043514 - 5043476 - G 72 -4.7 -4.6645 | gap 1, overlap 5043477 5043479 TACACAGATATAAAA GCACTGCAATTCTGGCTA TTAA TAGCAAAAATAGCAGT-C AAATCAATATGAGGT ECUMN_4879 5044091 - 5044351 + | hypothetical protein from bacteriophage origin TERM 6844 5044623 - 5044648 + F 100 -12.6 -5.06052 | gap 1 TTATCTCCGTGAATC CCCCGC-CACC TTTCC GGTGCGCGGGG TTTTGTCTTTTTTCA ECUMN_4880 5044639 - 5045550 + | conserved hypothetical protein with GTPase domain TERM 6845 5045692 - 5045668 - f 91 -8.7 -4.90381 | opp_overlap 5045668 5045686 5045687, overlap 5045683 GTTAATAGAATAAAA CGATCGATA AAACAGG TATCGATCG TTGCTATCGATCGTT TERM 6846 5045687 - 5045705 + F 72 -7.4 -4.02424 | opp_overlap 5045668 5045683, overlap 5045668 5045686 CGATAAAACAGGTAT CGATCGTT GCT ATCGATCG TTTATAGTGGTTAAT TERM 6847 5045863 - 5045890 + F 100 -17.8 -5.45652 | TGCTGTTTTGTACCT GCCGGTATCCAC ATTT GTGGGTACCGGC TTTTTTATTCACCCT TERM 6848 5046252 - 5046239 - g 82 -8.1 -4.58076 | ACAATGGATACAAAA TGGCG GTAT CGCCA ACAACACTACTGTCA flu 5045922 - 5049041 + | antigen 43 (Ag43) phase-variable biofilm formation autotransporter; CP4-44 prophage TERM 6849 5049064 - 5049086 + F 100 -19.2 -4.98531 | GTCACTCTCCTTCAG GCCCCGGTCA TCA TGACCGGGGC TTTTTACTTTCAGGG ECUMN_4882 5049076 - 5049270 + | hypothetical protein TERM 6850 5049349 - 5049374 + F 100 -13.3 -5.09521 | CATTTCATCTGTCAG GCCGCGTCTTC TCCG GGAGACGTGGC TTTTTCATTTATTAC TERM 6851 5049428 - 5049441 + GF 77 -6.7 -4.48987 | AAGGAGCAAATTATG CGACT AGCC AGTCG TTTTGGTTATGCGAA ECUMN_4883 5049425 - 5050243 + | hypothetical protein TERM 6852 5050287 - 5050316 + GF 100 -16.5 -3.34455 | gap 1, opp_overlap 5050285 5050282, overlap 5050282 GGCACCAGAATCACC CGACGCCCCGG-AG GCG CTGCCGGGGTGTCG TTCCATTTCTGATGA TERM 6853 5050396 - 5050379 - gf 75 -8.5 -3.85817 | ACCGTCCCGGAGAAA TCAGTCT GTGC AGACTGA GTATACAGGCAATGG ECUMN_4884 5050204 - 5051058 + | conserved hypothetical protein; putative antirestriction protein yeeS 5051059 - 5051550 + | putative DNA repair protein; CP4-44 prophage yeeT 5051613 - 5051834 + | conserved hypothetical protein; CP4-44 prophage ECUMN_4887 5051834 - 5051947 + | hypothetical protein TERM 6854 5052150 - 5052191 + GF 72 -8.8 -3.62572 | gap 2, opp_overlap 5052150 CGTGCCGGTATCAGA GGCC-GGTTCAGA-GATGCG GATG CGTACCCTCTGGACCAGGCC TTTCCGCTGCTGATG ECUMN_4888 5051889 - 5052365 + | hypothetical protein TERM 6855 5052894 - 5052914 + F 81 -11.9 -3.04263 | AGACTCACCTCTGTT GCTCCATCA TGA TGATGGGGC TGTTGGCCCTCGAAT TERM 6856 5053006 - 5052995 - f 73 -4.4 -4.80729 | AAAGACAATAGAAAA GTAC ATAT GTAC AAAAAGTGTGATTTA mtnK 5053293 - 5054552 + | Methylthioribose kinase (MTR kinase) mtnA 5054562 - 5055677 + | methyl-thioribose-1-phosphate isomerase TERM 6857 5055759 - 5055736 - g 91 -5.4 -5.31877 | AGTTAGCAGAAAAAA TCATTTCC ACTTGTCG GGAAATGA ATGCGTCAGGTCTTA mtnB 5055708 - 5056349 + | methyl-thioribulose-1-phosphate dehydratase TERM 6858 5056404 - 5056378 - f 76 -10.2 -3.31329 | opp_overlap 5056378 5056380 5056383, overlap 5056374 5056376 5056381 5056383 TTAATTAATAACATA TGACAGCCATTC GCA GAATGGCTGCTA TTCCCTCTGTCCACA TERM 6859 5056378 - 5056404 + F 74 -10.2 -3.15999 | opp_overlap 5056378 5056374 5056376 5056381 5056383, overlap 5056380 5056383 TTAATTAATAACATA TGACAGCCATTC GCA GAATGGCTGCTA TTCCCTCTGTCCACA TERM 6860 5056380 - 5056402 + F 78 -10.6 -3.14125 | opp_overlap 5056378 5056374 5056376 5056381 5056383, overlap 5056378 5056383 AATTAATAACATATG ACAGCCATTC GCA GAATGGCTGC TATTCCCTCTGTCCA TERM 6861 5056401 - 5056381 - f 87 -14.1 -2.81625 | opp_overlap 5056380 5056378 5056383, overlap 5056378 5056374 5056376 5056383 ATTAATAACATATGA CAGCCATTC GCA GAATGGCTG CTATTCCCTCTGTCC TERM 6862 5056383 - 5056399 + F 74 -10.9 -2.77232 | opp_overlap 5056381 5056378 5056374 5056376 5056383, overlap 5056380 5056378 TAATAACATATGACA GCCATTC GCA GAATGGC TGCTATTCCCTCTGT TERM 6863 5056399 - 5056383 - f 75 -10.9 -2.94704 | opp_overlap 5056383 5056380 5056378, overlap 5056381 5056378 5056374 5056376 TAATAACATATGACA GCCATTC GCA GAATGGC TGCTATTCCCTCTGT TERM 6864 5057162 - 5057152 - g 77 -3.2 -5.14563 | CTGGTCATGAAAAAA CCTA TTT CAGG AGAACCGGTCAACGG ECUMN_4892 5056453 - 5057457 + | putative integral membrane protein; putative sugar permease TERM 6865 5057487 - 5057460 - T 80 -6.2 -4.78572 | opp_overlap 5057462, overlap 5057461 5057462 CGCTAATCAATAAAA TCCTGCCCCATA TCTA CATGGGGCAGTT GTTCATTCTTTTAGT TERM 6866 5057486 - 5057461 - T 75 -9.7 -3.4642 | opp_overlap 5057462, overlap 5057460 5057462 GCTAATCAATAAAAT CCTGCCCCATA TCTA CATGGGGCAGT TGTTCATTCTTTTAG TERM 6867 5057485 - 5057462 - T 84 -13.2 -2.67129 | opp_overlap 5057462, overlap 5057461 5057460 CTAATCAATAAAATC CTGCCCCATA TCTA CATGGGGCAG TTGTTCATTCTTTTA TERM 6868 5057462 - 5057485 + T 100 -12.5 -3.95647 | opp_overlap 5057462 5057461 5057460 CTAATCAATAAAATC CTGCCCCAT ATCTAC ATGGGGCAG TTGTTCATTCTTTTA yjhU 5058484 - 5057498 - | putative DNA-binding transcriptional regulator; KpLE2 phage-like element ECUMN_4894 5058775 - 5058584 - | hypothetical protein TERM 6869 5058644 - 5058680 + g 100 -22.6 -3.15544 | opp_overlap 5058653, overlap 5058653 CCCGCTGTTCCCCCA TACTGTAAAGCCGGAG ACATG CTCCGGCTTTACAGTA TTACTGAGAATACAC TERM 6870 5058653 - 5058671 + g 85 -11.7 -3.67517 | opp_overlap 5058653, overlap 5058644 CCCCCATACTGTAAA GCCGGAG ACATG CTCCGGC TTTACAGTATTACTG TERM 6871 5058671 - 5058653 - G 85 -11.7 -3.63627 | opp_overlap 5058653 5058644 CCCCCATACTGTAAA GCCGGAG ACATG CTCCGGC TTTACAGTATTACTG yjhF 5060180 - 5058831 - | putative transporter; KpLE2 phage-like element TERM 6872 5058874 - 5058863 - G 87 -4.4 -5.22006 | overlap 5058867 CGAGCAGAATAAAAA TCAG CCCA CTGA TGGATAAGAGTGTGG yjhG 5062254 - 5060287 - | putative dehydratase; KpLE2 phage-like element TERM 6873 5061633 - 5061619 - G 77 -10 -3.58726 | opp_overlap 5061623 GTCCTGTAGAGATAA TTCGCC ATT GGCGAA GCGTGCGCCAATGGT TERM 6874 5061623 - 5061647 + g 93 -12.9 -3.60971 | opp_overlap 5061619, overlap 5061639 TGTAGAGATAATTCG CCATTGGCGAA GCG TGCGCCAATGG TTTGCACCTTGCCGT yjhH 5063170 - 5062265 - | putative lyase/synthase (dapA-like); KpLE2 phage-like element yjhI 5063963 - 5063175 - | putative DNA-binding transcriptional regulator; KpLE2 phage-like element sgcR 5065048 - 5064266 - | putative DNA-binding transcriptional regulator; KpLE2 phage-like element sgcE 5065697 - 5065065 - | putative epimerase; KpLE2 phage-like element TERM 6875 5065152 - 5065180 + g 73 -11.7 -2.71731 | ATGTTGCGCCCCAGC TGCTGCCAGTTGC TGT GCAGCTGCCAGCG TAATTCCACCGTCGG sgcA 5066140 - 5065709 - | putative phosphotransferase enzyme IIA component; KpLE2 phage-like element TERM 6876 5066240 - 5066270 + r 76 -10.4 -3.32819 | overlap 5066242 5066243 GGGTTATTGCTCTTT GCCGGGGATAAGCG CTC TGCTTATCCCCATC TTATCGGCGTATATG TERM 6877 5066242 - 5066268 + r 81 -11.6 -3.22951 | overlap 5066240 5066243 GTTATTGCTCTTTGC CGGGGATAAGCG CTC TGCTTATCCCCA TCTTATCGGCGTATA TERM 6878 5066243 - 5066267 + r 89 -15.1 -2.53449 | overlap 5066242 5066240 TTATTGCTCTTTGCC GGGGATAAGCG CTC TGCTTATCCCC ATCTTATCGGCGTAT sgcQ 5067077 - 5066271 - | putative nucleoside triphosphatase; KpLE2 phage-like element TERM 6879 5066441 - 5066455 + g 78 -7.8 -4.42464 | opp_overlap 5066438 5066441 TGTTGGCCAACACGA CGGTGT CAG GCACCG TTTCTTTGACCCGTT sgcC 5068403 - 5067090 - | putative phosphotransferase enzyme IIC component; KpLE2 phage-like element TERM 6880 5067409 - 5067399 - G 72 -6.8 -4.2028 | CATACAGATAAAGAA CGGT GCT ACCG GCAGGTCTGCGAGGG TERM 6881 5067798 - 5067814 + g 90 -6.6 -5.1675 | AGCATCGATATTGCG TCCCTT CATGA AAGGGA TTTTTTCATAGATAG sgcB 5068693 - 5068415 - | putative enzyme IIB component of PTS; KpLE2 phage-like element sgcX 5069811 - 5068690 - | putative endoglucanase with Zn-dependent exopeptidase domain; KpLE2 phage-like element yjhP 5071343 - 5070597 - | putative methyltransferase; KpLE2 phage-like element yjhQ 5071944 - 5071399 - | putative acetyltransferase; KpLE2 phage-like element yjhX 5072213 - 5071956 - | conserved hypothetical protein; KpLE2 phage-like element TERM 6882 5072548 - 5072561 + r 79 -6.7 -4.67982 | overlap 5072538 CGGCTTTTCCCTTCG GGAGA TTAT TCTCC TTTTGTTAAATCCAG ECUMN_4909 5072835 - 5072704 - | hypothetical protein TERM 6883 5072927 - 5072950 + H 87 -13.8 -3.10975 | opp_overlap 5072928 ACTGCCCACGATTAA AGGTGGCCGC TCAG GCGGCCACCG TATTCGATAATAAAT TERM 6884 5072949 - 5072928 - H 100 -17.3 -3.78775 | opp_overlap 5072927 CTGCCCACGATTAAA GGTGGCCGC TCAG GCGGCCACC GTATTCGATAATAAA yjhR 5073175 - 5074191 + | putative frameshift suppressor; KpLE2 phage-like element ECUMN_4912 5074482 - 5074306 - | hypothetical protein insH 5074342 - 5075358 + | IS5 transposase and trans-activator; CP4-44 prophage TERM 6885 5075817 - 5075827 + Tr 71 -4.6 -4.63542 | AATAACAACGGTTTA TGCG GTG CGCG TTTTTCACCCTTGTG yjhS 5076953 - 5075973 - | hypothetical protein TERM 6886 5077010 - 5076991 - R 79 -12.1 -2.69246 | opp_overlap 5076984 5076983, overlap 5076986 5076983 GACAAATTGATAGCA GGGCCCC TTTACC GGGGCCC TGAAGCGTTAGTTTT yjhT 5078124 - 5077018 - | hypothetical protein TERM 6887 5077247 - 5077261 + g 70 -5 -4.4648 | TCATGCGCATAGTTC TTACCG TTC TGGTAA TTTTCTCGTGAACCT yjhA 5078860 - 5078144 - | N-acetylnuraminic acid outer membrane channel protein ECUMN_4917 5079229 - 5079378 + | hypothetical protein TERM 6888 5079440 - 5079450 + T 71 -4 -4.7878 | opp_overlap 5079430, overlap 5079449 AAAAACTAAAGATCT TAGT TTA ACTA TTTGTTTTATAAATA ECUMN_4918 5080055 - 5079660 - | hypothetical protein TERM 6889 5080279 - 5080256 - H 75 -4.6 -4.94902 | overlap 5080277 TAATCAGGATAAAAA TGTTGGATTA TTGC TAACCCAGCA CAGCTAGTGCGCGTC TERM 6890 5080610 - 5080636 + G 95 -9.4 -4.85599 | AGTATCCGTACTTCG TACCCGCATGCT GAG AGCGAGTGGGTA TTTTTATCACGTAAG fimB 5080316 - 5080918 + | tyrosine recombinase/inversion of on/off regulator of fimA TERM 6891 5080898 - 5080910 + F 85 -9.1 -4.3898 | opp_overlap 5080895 AGAGCCAGAGGACGA CAGCG TCA CGCTG TTTTATAGAGATAGT TERM 6892 5081231 - 5081246 + F 83 -4 -5.38839 | opp_overlap 5081226, overlap 5081233 AATGAAAATAGATGT TGTCAC ATCA GTGATA TTTTATTTTTGTATG TERM 6893 5081281 - 5081310 + F 100 -10.9 -5.10064 | gap 1 TTAATGTAATTGACT GATAGCCACATCAC TCC GTG-TGTGGTTATC TTTTTATCTATTGGG fimE 5081396 - 5081992 + | tyrosine recombinase/inversion of on/off regulator of fimA fimA 5082474 - 5083022 + | major type 1 subunit fimbrin (pilin) fimI 5083087 - 5083626 + | fimbrial protein involved in type 1 pilus biosynthesis TERM 6894 5083831 - 5083819 - g 77 -6.3 -4.62069 | CCGGCAGGGCAAAAA CAAGT GCA ACTTG CCGTGACAAATAATG TERM 6895 5083974 - 5083954 - g 88 -2.6 -5.54192 | opp_overlap 5083956, overlap 5083956 ATGAAGGGAAAAAAA GAGAATAC CTTAC GTATTCTT GATGCAACAAATAAC TERM 6896 5083972 - 5083956 - g 70 -5.2 -4.40173 | opp_overlap 5083956, overlap 5083954 GAAGGGAAAAAAAGA GAATAC CTTAC GTATTC TTGATGCAACAAATA fimC 5083663 - 5084388 + | chaperone, periplasmic TERM 6897 5086424 - 5086412 - g 81 -10.5 -3.56643 | GCTATAGCGTGCAAA CCGGC TAT GCCGG GGGAGGCGATGGAAA fimD 5084455 - 5087091 + | outer membrane usher protein, type 1 fimbrial synthesis TERM 6898 5087164 - 5087193 + G 82 -12.9 -2.87931 | GTGAGTCACGCTTTG GCTGCGGATAGCA CGAT TACTATCCGCGGC TATGTCAGGGATAAC fimF 5087101 - 5087631 + | minor component of type 1 fimbriae fimG 5087644 - 5088147 + | minor component of type 1 fimbriae TERM 6899 5088273 - 5088243 - g 70 -6.9 -4.07885 | gap 1, opp_overlap 5088265 5088267 CATTCGCCTGTAAAA CCGCCAAT-GGTAC CGCT ATCCCTATTGGCGG TGGCAGCGCCAATGT TERM 6900 5088265 - 5088287 + G 70 -7 -4.0492 | opp_overlap 5088243, overlap 5088267 TGGTACCGCTATCCC TATTGGCGGT GGC AGCGCCAATG TTTATGTAAACCTTG fimH 5088167 - 5089069 + | minor component of type 1 fimbriae TERM 6901 5089278 - 5089304 + T 89 -14.4 -3.10537 | overlap 5089281 AGACTTTGTCATCAG TCTGAGCCTGCC ATT GGCAGGCTCTGG TGTCCTTTTACGCTA TERM 6902 5089281 - 5089301 + T 100 -16.9 -2.75838 | overlap 5089278 CTTTGTCATCAGTCT GAGCCTGCC ATT GGCAGGCTC TGGTGTCCTTTTACG gntP 5090655 - 5089312 - | fructuronate transporter ECUMN_4929 5090735 - 5091043 + | hypothetical protein TERM 6903 5091865 - 5091837 - gf 71 -8.9 -3.28712 | opp_overlap 5091828 5091841 CGTGCGTGCTGACAA CGATCTGGTTGAT ATG ATCAAGCAGTTCG GTCCGCGTATTTACT TERM 6904 5092054 - 5092024 - gf 70 -6.9 -4.0098 | gap 1 GCGGAAGGCAAAGAA GACC-TGATCCCGA TGCG TCCGGACCACGGTC ATCAGATGCTGGACG uxuA 5090995 - 5092179 + | mannonate hydrolase TERM 6905 5092186 - 5092210 + F 100 -15 -3.58329 | opp_overlap 5092182, overlap 5092182 AGCCGTTAATATCCA CCGGCATGGC TGCGC GCCGTGCCGG TTCCTTCTTCCTTGC TERM 6906 5092493 - 5092482 - g 86 -5.8 -5.15117 | GAAAACCTGAAAAAA CAGC AACT GCTG TACACCGTAGCGGAA TERM 6907 5092526 - 5092512 - g 72 -4.9 -4.62336 | ACCGTAGCGGAAAAA GGCGC AGAGA GCACC GAGCTGAAAATTATC uxuB 5092260 - 5093720 + | D-mannonate oxidoreductase, NAD-binding TERM 6908 5093745 - 5093776 + F 100 -12.5 -4.94243 | TACCCTACAGACTTA CTGGTCAATCAAA CTGATA TTTGGTTGACCAG TTTTCGTTTTTTTGC uxuR 5093935 - 5094708 + | DNA-binding transcriptional repressor TERM 6909 5094722 - 5094746 + T 82 -9.3 -4.2528 | opp_overlap 5094722, overlap 5094730 5094735 5094737 5094738 GACTTATTATAATAA GCGCAAGGG TAAACGT TCCTTGCGC TTTCTTAAATTAAGA TERM 6910 5094746 - 5094722 - T 75 -8.6 -3.8512 | opp_overlap 5094722 5094730 5094735 5094737 5094738 GACTTATTATAATAA GCGCAAGG GTAAACGTT CCTTGCGC TTTCTTAAATTAAGA yjiC 5095679 - 5094849 - | hypothetical protein TERM 6911 5095961 - 5095975 + H 70 -5.8 -4.40333 | GTATTTTTGATGTAT TTGATA TGT TATCAA TTTATATTATTTACA ECUMN_4934 5096243 - 5096386 + | hypothetical protein TERM 6912 5096409 - 5096434 + GT 70 -9.8 -2.84103 | opp_overlap 5096405 GGCAATAAAACGTCA TCGCTGCGTA AATCGG TATGCAGCGA TCTCCTCACTCTTTT yjiD 5096352 - 5096744 + | DNA replication/recombination/repair protein yjiE 5097648 - 5096737 - | putative DNA-binding transcriptional regulator iadA 5098885 - 5097713 - | isoaspartyl dipeptidase TERM 6913 5098720 - 5098698 - G 77 -6.2 -4.71426 | overlap 5098699 5098700 TGTTGATCAATAAAA CCTGGGCAGA GGA TCTGCCCACT GAGATCGACAACCGT TERM 6914 5098719 - 5098699 - G 74 -9.7 -3.42374 | overlap 5098698 5098700 GTTGATCAATAAAAC CTGGGCAGA GGA TCTGCCCAC TGAGATCGACAACCG TERM 6915 5098718 - 5098700 - G 81 -13.2 -2.64942 | overlap 5098699 5098698 TTGATCAATAAAACC TGGGCAGA GGA TCTGCCCA CTGAGATCGACAACC yjiG 5099359 - 5098898 - | conserved hypothetical protein; putative inner membrane protein TERM 6916 5099072 - 5099056 - G 70 -6.5 -4.25104 | opp_overlap 5099055 TCGCGGGCAGTAAAA CGGTGAC ATC GTGACCG GTTAATGCGCCAGCG TERM 6917 5099311 - 5099336 + g 70 -4.7 -4.57569 | opp_overlap 5099300 5099304 5099301 TAAAGCCACGGCGCG CGCCATCGATA AACA TATCCATGACG TTTTTGCGGACCTGA yjiH 5100039 - 5099356 - | conserved hypothetical protein; putative inner membrane protein TERM 6918 5100042 - 5100053 + H 93 -3 -5.90231 | opp_overlap 5100042 CTTGTTGTGTCATAA CAAT CCCC ATTG TTTTTTTGTGTTTGT kptA 5100289 - 5100843 + | 2'-phosphotransferase yjiJ 5102034 - 5100856 - | conserved hypothetical protein; putative inner membrane protein TERM 6919 5100956 - 5100916 - G 76 -7.5 -4.25458 | gap 2, opp_overlap 5100936 5100938, overlap 5100903 5100919 5100938 AAGCGCAGCAATAAA CAACGCC-GCC-GCGCCGC AGAGA GTGGCGCTGGCAAGCGCCG ATGTTCCATTGCTGA TERM 6920 5100953 - 5100919 - G 76 -7.8 -4.24413 | gap 2, opp_overlap 5100936 5100938, overlap 5100903 5100916 5100938 CGCAGCAATAAACAA CGCC-GCC-GCGCCGC AGAGA GTGGCGCTGGCAAGCG CCGATGTTCCATTGC TERM 6921 5101840 - 5101828 - G 79 -4.1 -5.07652 | overlap 5101833 TGCGCCAAAAGAAAA TAGCA GAC TGCCA GCCAGATACCCCGCA yjiK 5103070 - 5102102 - | hypothetical protein TERM 6922 5102480 - 5102462 - GR 71 -2.4 -5.00616 | TTTCTCTTTAAAAAA CCAGAA AGTGTGA TCCTGG CGAGAATAAGCCAAC ECUMN_4944 5103284 - 5103027 - | hypothetical protein TERM 6923 5103218 - 5103235 + gr 74 -7.7 -4.03234 | overlap 5103213 AAGTCATGCCCGCTG CCTGCAA CGCT TTGCGGG TTTGTATGACGCCGA hgdC 5104048 - 5103281 - | ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase TERM 6924 5103986 - 5103969 - G 84 -10.5 -3.84246 | GTTGGAACGAGGAAA CGGCGCG TAAT CACGCCG TCTGCCAGTAAGATC yjiM 5105209 - 5104058 - | putative 2-hydroxyglutaryl-CoA dehydratase (hgdB-like) TERM 6925 5104674 - 5104688 + g 72 -5.6 -4.57073 | overlap 5104675 TAAAAATTAGCCAGT GCGCGA CGT TCGCGG TTTTTCAGCGCAATG TERM 6926 5104858 - 5104869 + g 82 -3 -5.27023 | GCTTAAACTCCGCCA TGTA TTCA TACA TTTTCTTTTTGCCGT TERM 6927 5105261 - 5105277 + r 71 -5.1 -4.55209 | GAGGCCACATTATTA CCATTCT TTT AGTATGG TTTATTTGATCTCTC yjiN 5106605 - 5105325 - | conserved hypothetical protein; putative inner membrane protein TERM 6928 5105910 - 5105935 + g 78 -7.5 -4.36595 | CAACTCCGCGCTATG TTCGCCCAACC ATTC GGTGGGGAGAA TTTTGGCTTTCAGTG TERM 6929 5106580 - 5106563 - G 80 -11.3 -3.32233 | opp_overlap 5106561, overlap 5106561 5106559 TAAGCAGTAAAGAGA GCGCCAA CCTT TTGGCGC GTCTGAGTTCGATGA yjiO 5107878 - 5106646 - | multidrug efflux system protein TERM 6930 5108028 - 5108007 - H 75 -10.9 -2.97166 | overlap 5108002 ATGTAATCAACCACA CTGCCTGTG AACA CACAGACAG AGAAATACTTTCTGA TERM 6931 5108060 - 5108034 - H 76 -8.1 -4.20086 | opp_overlap 5108030 5108038 ACACAGACAGAGAAA TACTTTCTGAC TTCGG GTCAGAATGTA TAACGATTACAAATA ECUMN_4949 5108357 - 5109277 + | Conserved hypothetical protein, putative transposase yjiR 5110933 - 5109521 - | fused putative DNA-binding transcriptional regulator ; putative aminotransferase TERM 6932 5111419 - 5111455 + H 77 -11.2 -2.64981 | gap 1, opp_overlap 5111417, overlap 5111416 5111415 CTCATGTCGATAACG GTCAAAAAACGCACAGT GATT ACT-TGTGTTTTTTGAC TGACTTTACAACTCT yjgt 5111725 - 5115063 + | hypothetical protein ECUMN_4953 5115076 - 5121420 + | conserved hypothetical protein, putative DEAD-box helicase-related protein (modular protein) TERM 6933 5121426 - 5121456 + T 100 -11.8 -4.53705 | overlap 5121428 CGCCTCCTGATGATG AGCCGCTCCCGATG TGG TGTCGGGAGCGGTA TTTTCTATAAAACTT TERM 6934 5121428 - 5121454 + T 100 -16.6 -3.87627 | overlap 5121426 CCTCCTGATGATGAG CCGCTCCCGATG TGG TGTCGGGAGCGG TATTTTCTATAAAAC mcrC 5122523 - 5121477 - | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC mcrB 5123902 - 5122523 - | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB yjiW 5124462 - 5124064 - | hypothetical protein TERM 6935 5124619 - 5124601 - R 100 -11.7 -5.38549 | GTGAAATAATAAAAA GCGCACC GGAAA GGTGCGC CAGAAAATAATGTTC hsdS 5126027 - 5124633 - | specificity determinant for hsdM and hsdR TERM 6936 5125796 - 5125810 + g 93 -3.6 -5.52347 | opp_overlap 5125796, overlap 5125771 5125772 ACATTGCAATAACAA TATCTT CAG GAGATA TTTTTTGATTTTCTT hsdM 5127613 - 5126024 - | DNA methylase M TERM 6937 5126449 - 5126463 + g 70 -10 -3.13522 | overlap 5126448 TAAACGGTGTGCGCT TGCCGA AAC TCGGCA TATTGGTACGCAGGT TERM 6938 5126595 - 5126584 - G 71 -2.2 -5.00616 | CCTGCGCGTAAAAAA TACC GGTC GGCA GACGCAGAATGGTGT hsdR 5131326 - 5127814 - | endonuclease R TERM 6939 5129133 - 5129147 + g 74 -2.7 -5.00616 | CATGGGCATTGGTGA CGCAG AAGAC CAGCG TTTTTTGCGACCCGG TERM 6940 5130474 - 5130489 + g 76 -7.6 -4.15044 | CATCTTTCCCGGTCG GCCATT CGGC AATGGC TTTATTGACGCCGGG mrr 5131514 - 5132428 + | methylated adenine and cytosine restriction protein TERM 6941 5132468 - 5132431 - T 77 -9.9 -3.65351 | gap 1, overlap 5132436 CTATTTTGAGTGAAA TATCAGGCCGGATGCGGC TGC GCCTTATCCGGCCC-ATA ACCCCTTACTTCCTC TERM 6942 5132464 - 5132436 - T 89 -14.5 -2.86124 | overlap 5132431 TTGAGTGAAATATCA GGCCGGATGCGGC TGC GCCTTATCCGGCC CATAACCCCTTACTT yjiA 5133430 - 5132474 - | putative GTPase yjiX 5133644 - 5133441 - | hypothetical protein TERM 6943 5133684 - 5133667 - R 100 -14.1 -4.51812 | TCTGATAAGAACAAA GCCCCGC CGAA GCGGGGC TAAACACGGTTAGTG yjiY 5135844 - 5133694 - | conserved hypothetical protein; putative inner membrane protein ECUMN_4964 5136158 - 5136012 - | hypothetical protein TERM 6944 5136231 - 5136203 - R 100 -9.6 -5.2291 | gap 1, overlap 5136204 AGATCACAATAAAAA TGCCCCTTCGACG AATG CGT-GAAGGGGCT GGAGCTTAAATCGCA TERM 6945 5136230 - 5136204 - R 100 -13.1 -3.72119 | gap 1, overlap 5136203 GATCACAATAAAAAT GCCCCTTCGACG AATG CGT-GAAGGGGC TGGAGCTTAAATCGC hpaC 5136749 - 5136237 - | 4-hydroxyphenylacetate 3-monooxygenase small component, Flavin:NADH reductase hpaB 5138329 - 5136767 - | 4-hydroxyphenylacetate 3-monooxygenase large component TERM 6946 5138480 - 5138492 + r 85 -7.7 -4.67904 | GTTTTGTGATCGAGG TCGCT TTT AGCGA TTTTTGACGTTACTA TERM 6947 5138537 - 5138510 - R 100 -14.2 -3.74693 | overlap 5138534 TTTGACGTTACTAAA TCCCCTTGCTCC AGGC GGAGAAAGGGGA ATAGCAGGTGGTGCC hpaA 5139470 - 5138580 - | Regulator of the 4HPA-hydroxylase operon ECUMN_4968 5140916 - 5139480 - | putative 4-hydroxyphenylacetate permease hpaX TERM 6948 5140842 - 5140855 + g 74 -2.4 -5.16841 | overlap 5140820 5140841 CTCCGGTATGGCAGG TGAG GTGTCG CTCA TTTTTCTTCCTCTAA TERM 6949 5141016 - 5140970 - R 77 -10.3 -3.53811 | gap 1, opp_overlap 5140946 5140962 5140947 5141004, overlap 5140971 CGGATGCGGCGTAAA CGCCTTATCCGGCCTACGGT TTGGTGCG AGTGTAGGCCGGATAAG-CG CAGCGCATCCGGCAT TERM 6950 5141017 - 5140971 - R 71 -10.3 -2.72144 | gap 1, opp_overlap 5140946 5140962 5140947 5141004, overlap 5140970 GGATGCGGCGTAAAC GC-CTTATCCGGCCTACGGT TTGGTGCG AGTGTAGGCCGGATAAGCGC AGCGCATCCGGCATT hpaI 5141837 - 5141031 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 6951 5141110 - 5141073 - G 76 -9.1 -3.72695 | gap 1, opp_overlap 5141073 AGCCTGCGCACCAAA CCGTGCT-GCCAGCGC TTCGGCG GCGCGGGCGAGCAGGG TGGTGTCAACGCCGA TERM 6952 5141781 - 5141801 + g 73 -9 -3.63589 | gap 1, overlap 5141777 TAATCCGATCTGCGG GCGGC-CTG CTTT CAGCGCCGC TTTAAAACTGTTTTC TERM 6953 5141857 - 5141886 + r 88 -9.3 -4.59109 | opp_overlap 5141858 5141859, overlap 5141859 GCAGCTAATGGAGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 6954 5141885 - 5141858 - R 86 -12.8 -3.22388 | opp_overlap 5141857 5141859, overlap 5141859 CAGCTAATGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 6955 5141859 - 5141884 + r 100 -16.3 -3.90762 | opp_overlap 5141858 5141859, overlap 5141857 AGCTAATGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 6956 5141884 - 5141859 - R 100 -16.3 -2.53112 | opp_overlap 5141859 5141857, overlap 5141858 AGCTAATGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG insG 5143214 - 5141868 - | putative IS4 transposase; KpLE2 phage-like element TERM 6957 5143229 - 5143204 - G 100 -9.8 -5.61596 | opp_overlap 5143204 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 6958 5143204 - 5143229 + g 73 -9.1 -3.61398 | opp_overlap 5143204 ATGTGCATAAAAAAA TCCGGAAAC AAGTGAGC GTTTCCGGA TTCTTACACAGCCAC hpaH 5144089 - 5143253 - | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase hpaF 5144519 - 5144139 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpaD 5145380 - 5144529 - | 3,4-dihydroxyphenylacetate 2,3-dioxygenase (Homoprotocatechuate 2,3-dioxygenase) TERM 6959 5144842 - 5144823 - G 82 -9.2 -4.16842 | overlap 5144839 CTGATCGTCAATAAA GCGGTGCG ATAA CGAACCGC TGGCAAGGACCGCCA hpaE 5146848 - 5145382 - | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase TERM 6960 5146820 - 5146834 + g 93 -6.4 -5.25976 | overlap 5146806 CCTGCAACATTTTTG CCGTTG ATC CAATGG TTTATTTTTTTCATT hpaG 5148140 - 5146845 - | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase TERM 6961 5148159 - 5148184 + H 73 -4.9 -4.65747 | overlap 5148155 5148160 5148163 TCGGATTCGATCATC TTAATCATTAA TATG TTAATGATTAC TTTTATTCCCGATTG TERM 6962 5148658 - 5148642 - g 72 -8.7 -3.72695 | overlap 5148651 AGTGTTGCGATTAAA GCCGATC AAT GATCAGC GGAAGCTCTATATCT hpaR 5148352 - 5148852 + | 4-hydroxyphenylacetate degradative operon repressor TERM 6963 5148871 - 5148881 + F 79 -6.8 -4.67353 | opp_overlap 5148871 TTTAATATCTGATAA CCAG CGC CTGG TTTTTCCATGGATGG TERM 6964 5148907 - 5148918 + F 70 -3 -4.98531 | GATGGCGGGTTACAC CTTT TCAT AAAG TTTTTCCTTTCCAGG TERM 6965 5148996 - 5149010 + G 72 -7.1 -4.20883 | GTATCAAAATTGTGA CCAGC TTACT GCTGG TTTTGGCCGTTTTTG TERM 6966 5149321 - 5149282 - g 91 -5.6 -5.42862 | gap 1, opp_overlap 5149316, overlap 5149298 5149299 ACAGGCGGAAAAAAA CTG-GGCGGATTACGAAGC GTT GCCGCGTGACCCGCGTCAG AGCACCGCCGCAGCG TERM 6967 5149940 - 5149960 + G 70 -9.7 -3.14963 | AACGCCGAGAATGCG CGCCAGG CCAGCCA CCTGGCG TTAAGTGCTTCTGAA TERM 6968 5150070 - 5150052 - g 70 -5.2 -4.37886 | opp_overlap 5150053, overlap 5150053 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATTGACGGCATTGC TERM 6969 5150589 - 5150569 - g 71 -2.4 -5.00616 | GGCTGTGGTAAAAAA CGTGACGC CAGCT ACGCCGCG TAAAATGGCAGTGGC tsr 5148971 - 5150635 + | methyl-accepting chemotaxis protein I, serine sensor receptor TERM 6970 5150675 - 5150648 - T 100 -12.2 -4.8543 | gap 1 TAATCGCCATAAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAGGGAGTTTAATCT yjjM 5153174 - 5152260 - | putative DNA-binding transcriptional regulator TERM 6971 5152901 - 5152911 + g 70 -4 -4.69656 | TGAAAAAAGCCTGCT CAAA CAC TTTG TTTTGTTCACTCATT yjjN 5153313 - 5154335 + | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 6972 5154363 - 5154389 + T 100 -5.8 -6.15717 | opp_overlap 5154354 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTTCTGTTTC TERM 6973 5154465 - 5154431 - T 100 -22.4 -3.30124 | TTGTAGGCCGGAGAA GATGTGTAGGTCGCAC CTT ATGCGACCTACACATC AGTCAGAAATTACCC mdoB 5156766 - 5154475 - | phosphoglycerol transferase I TERM 6974 5155762 - 5155748 - G 72 -5.7 -4.54047 | GTACGCGAGATAAAA CCATC CGGGT GATGG GTATCGACTGTCAGG TERM 6975 5156108 - 5156097 - G 81 -7.2 -4.60924 | CAAATGGGGCAAAAA GCGG AATG CCGC ACTGAGAAGCCACCA yjjA 5157514 - 5157020 - | hypothetical protein dnaC 5158300 - 5157563 - | DNA biosynthesis protein TERM 6976 5158178 - 5158192 + g 72 -7 -4.15703 | ACGTTCGAGAGCGGC GGAGCG GAT CGCCCC TTGTTCTTTCTGCCA dnaT 5158842 - 5158303 - | DNA biosynthesis protein (primosomal protein I) TERM 6977 5158399 - 5158413 + g 77 -2.7 -5.07486 | GGCACGACCGATTTG CAGGC TGCGC GCCAG TTTTTGTTGCCACTG TERM 6978 5158932 - 5158897 - R 91 -13.4 -3.26947 | opp_overlap 5158899 5158901 5158931 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTAAGCGAGGCAAT TERM 6979 5158899 - 5158930 + r 74 -10.9 -2.70932 | opp_overlap 5158897, overlap 5158901 ACTTTTATAGTAACA CACGGAGGAGAGG AGGCTG TCTCTCATCCGTG TGCTTAAGCGAGGCA ECUMN_4986 5159437 - 5158949 - | hypothetical protein yjjP 5160183 - 5159413 - | conserved hypothetical protein; putative inner membrane protein TERM 6980 5160143 - 5160133 - G 70 -5.4 -4.43397 | TTGCAAAAGAAATAA TCCA CAC TGGA TACAAAGCCGTGTTA TERM 6981 5160162 - 5160150 - G 81 -9.1 -4.05747 | opp_overlap 5160147 CACACTGGATACAAA GCCGT GTT ACGGC TCGCTGTTGCTCAGT TERM 6982 5161389 - 5161371 - g 86 -3.9 -5.41143 | gap 1 CAGCGCCCAAAAAAA CAGTGCGA TGCG TCG-ACTG GCAATTCACAGCAAC yjjQ 5160802 - 5161527 + | putative DNA-binding transcriptional regulator bglJ 5161539 - 5162162 + | DNA-binding transcriptional activator fhuF 5162988 - 5162200 - | ferric iron reductase involved in ferric hydroximate transport TERM 6983 5162518 - 5162538 + g 73 -11.9 -2.80922 | overlap 5162515 5162512 5162520 ACTGATTAACGTTTC CATTCGCTG CTG CGGCGAATG TAGTGTTGCGTTTTT ECUMN_4991 5163018 - 5163365 + | hypothetical protein rsmC 5165136 - 5164105 - | 16S RNA m2G1207 methylase TERM 6984 5165481 - 5165465 - gH 79 -2.2 -5.26316 | overlap 5165466 TGACGCCAGAAAAAA TCGCGA TGCTG CCGCAA GGCAGTCGCTGCAAC holD 5165239 - 5165652 + | DNA polymerase III, psi subunit TERM 6985 5165919 - 5165903 - gf 70 -3.5 -4.67904 | overlap 5165904 GACGAACTGGAAAAA CGCGGCG TGG CGACGCT ATGGCTGGAAGTCCG rimI 5165621 - 5166067 + | acetylase for 30S ribosomal subunit protein S18 TERM 6986 5166367 - 5166382 + G 70 -6.8 -4.1347 | gap 1 GCGGAAATCTGTACG CCGCTGC CGG GC-GCGG TTTCTCTGCTTAACG yjjG 5166082 - 5166759 + | dUMP phosphatase TERM 6987 5166815 - 5166829 + F 70 -9.2 -3.14132 | opp_overlap 5166813 5166814 TCGTTTTCAACAAGC GCGGCG CGA TGCCGC TTACTCAAGAAGAAA TERM 6988 5166868 - 5166901 + G 77 -8.9 -4.06419 | gap 1, opp_overlap 5166876, overlap 5166876 ACGTTGTCTCCTTAT TTGCAAGAG-GTGGCG AAG CGCCGCACTTTTGCCA TTATTTCTCACCCGG TERM 6989 5167778 - 5167757 - g 70 -5.9 -4.18018 | gap 1 GCTTCGTATTTAAAA TTCAGG-CCA ACA TGGACCCGAA ACACCGCGACCGCGT prfC 5166850 - 5168439 + | peptide chain release factor RF-3 TERM 6990 5168450 - 5168475 + F 89 -14.7 -2.68338 | overlap 5168448 5168447 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTCCCTTCCT osmY 5168832 - 5169437 + | periplasmic protein ytjA 5169546 - 5169725 + | hypothetical protein TERM 6991 5169757 - 5169775 + F 100 -14.6 -4.28049 | opp_overlap 5169757 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6992 5169775 - 5169757 - f 100 -14.6 -3.67989 | opp_overlap 5169757 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6993 5170214 - 5170224 + G 74 -8.2 -3.90744 | opp_overlap 5170212 CGTTGCAAATGGATA CCGC CGC GCGG TTGTTTGACAGCGGC yjjU 5169847 - 5170920 + | putative esterase TERM 6994 5171395 - 5171420 + G 81 -9.7 -3.87815 | gap 1 TGGTTCACGGTTTTT CCG-GCAGCCTG CAA CAGGCTGAACGG TTTGTACAGCTGGGC yjjV 5170917 - 5171696 + | putative DNase TERM 6995 5171862 - 5171808 - T 77 -11.6 -2.57931 | opp_overlap 5171808 5171807 5171851, overlap 5171807 CGTAGGCCGGATAAG GCGTTCA-CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCAGATGCGACGCTTGACGC GTCTTATCATGCCTA TERM 6996 5171963 - 5171908 - T 74 -9.7 -3.30124 | gap 1, opp_overlap 5171908 5171909 5171952, overlap 5171909 5171942 5171943 CCGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGCG TCTTATCATGCCTAC TERM 6997 5171962 - 5171909 - T 84 -13.2 -2.57931 | gap 1, opp_overlap 5171909 5171908 5171952, overlap 5171908 5171942 5171943 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 6998 5171909 - 5171962 + T 74 -11 -2.56747 | gap 1, opp_overlap 5171908 5171909 5171942 5171943, overlap 5171908 5171952 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 6999 5172063 - 5172008 - T 74 -9.7 -3.30124 | gap 1, opp_overlap 5172008 5172009 5172052, overlap 5172009 5172042 5172043 CCGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGCG TCTTATCATGCCTAC TERM 7000 5172009 - 5172062 + T 74 -11 -2.56747 | gap 1, opp_overlap 5172008 5172009 5172042 5172043, overlap 5172008 5172052 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 7001 5172062 - 5172009 - T 84 -13.2 -2.57931 | gap 1, opp_overlap 5172009 5172008 5172052, overlap 5172008 5172042 5172043 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA yjjW 5173078 - 5172215 - | putative pyruvate formate lyase activating enzyme TERM 7002 5172493 - 5172447 - GT 100 -12.3 -3.80573 | gap 1, opp_overlap 5172447 5172446 GGGATTACCAGCAAA CGCAG-TTCCGCCAGCTTGCCG CGCT CGGCAAGCAAACAGATGCTGCG CTTAATCTGCTGATT TERM 7003 5173025 - 5173001 - GT 76 -6.4 -4.57569 | gap 1, overlap 5173003 GCAGCCCTGCAAAAA CAGAGCCAGAC GACT GCCTGGCCC-G TCAACGCAGGAGAAG TERM 7004 5173024 - 5173003 - GT 82 -10.1 -3.90316 | overlap 5173001 AGCCCTGCAAAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA yjjI 5174600 - 5173050 - | hypothetical protein TERM 7005 5174504 - 5174520 + gH 74 -9.4 -3.4072 | opp_overlap 5174516 TGTTTTCTGCTTCCA GCGCCA GAAAA TGGCGC TTCTGCTCCGGGCTA TERM 7006 5175467 - 5175447 - g 88 -5.3 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCGGCGG GCGGCGTGCGTACTG deoC 5174858 - 5175637 + | 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked TERM 7007 5175747 - 5175689 - f 100 -17.5 -3.30441 | gap 1, opp_overlap 5175691 5175692, overlap 5175691 5175692 CAGTAGGCCTGATAA GACGCGTCAGCGTCGCATCAGGCAGTCA GCAG TG-CTGCCTGATGCGGCGCGAACGCCTT ATCCGGCCTACGGGC TERM 7008 5175745 - 5175691 - f 100 -20.1 -3.21924 | gap 1, opp_overlap 5175691 5175692, overlap 5175689 5175692 GTAGGCCTGATAAGA CGCGTCAGCGTCGCATCAGGCAGTCA GCAG TG-CTGCCTGATGCGGCGCGAACGCC TTATCCGGCCTACGG TERM 7009 5175691 - 5175745 + F 100 -20.1 -3.30124 | gap 1, opp_overlap 5175691 5175689 5175692, overlap 5175692 GTAGGCCTGATAAGA CGCGTCAGCGTCGCATCAGGCAGTCA GCAG TG-CTGCCTGATGCGGCGCGAACGCC TTATCCGGCCTACGG TERM 7010 5175744 - 5175692 - f 100 -23.6 -2.5294 | gap 1, opp_overlap 5175691 5175692, overlap 5175691 5175689 TAGGCCTGATAAGAC GCGTCAGCGTCGCATCAGGCAGTCA GCAG TG-CTGCCTGATGCGGCGCGAACGC CTTATCCGGCCTACG TERM 7011 5175692 - 5175744 + F 100 -23.6 -2.57931 | gap 1, opp_overlap 5175692 5175691 5175689, overlap 5175691 TAGGCCTGATAAGAC GCGTCAGCGTCGCATCAGGCAGTCA GCAG TG-CTGCCTGATGCGGCGCGAACGC CTTATCCGGCCTACG deoA 5175863 - 5177185 + | thymidine phosphorylase deoB 5177237 - 5178460 + | phosphopentomutase TERM 7012 5178469 - 5178488 + F 90 -10.7 -4.38927 | GTTCTGATGGATTTG GGCGGAG CGTTGA CTCCGCC TTTGTTATGTCACAA deoD 5178517 - 5179236 + | purine-nucleoside phosphorylase TERM 7013 5179270 - 5179293 + T 91 -10.2 -4.87037 | CGATTGCCTTGTGAA GCCGGAACGG GAGA CTGCTCCGGC TTTTTAGTATCTATT ECUMN_5009 5179647 - 5179420 - | conserved hypothetical protein, putative transcriptionnal regulator lplA 5180695 - 5179679 - | lipoate-protein ligase A TERM 7014 5180301 - 5180313 + g 70 -6.9 -4.07687 | overlap 5180302 CCTGAGACTTTGCGG TCGCC TTC GGCGG TTTTCACCACCAGAT ytjB 5181367 - 5180723 - | hypothetical protein TERM 7015 5181065 - 5181079 + g 79 -10 -3.76482 | opp_overlap 5181064 5181063 GCTTTCACCAGAACG GGCGAT AAG ATCGCC TTGTTCATCATATAC TERM 7016 5182385 - 5182366 - g 82 -7.8 -4.48175 | opp_overlap 5182374 5182375, overlap 5182377 AAAAGTGAATGAAAA GACGGAAG TCAC CATCCGTC ACGCTGACCTGATGG serB 5181473 - 5182441 + | 3-phosphoserine phosphatase TERM 7017 5183279 - 5183266 - g 78 -5.2 -4.87665 | GCGCAGCCATAAAAA CCGC TTCGGC GCGG TGAATGAGCTGGGCG radA 5182490 - 5183872 + | repair protein radA homolog nadR 5183893 - 5185125 + | bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase ECUMN_5015 5185437 - 5185312 - | hypothetical protein ECUMN_5016 5185537 - 5185352 - | hypothetical protein ECUMN_5017 5185798 - 5185586 - | conserved hypothetical protein; putative exported protein TERM 7018 5185947 - 5185921 - R 83 -10.8 -3.62046 | opp_overlap 5185922 5185937, overlap 5185922 5185924 TGATTTTGTTAATAA TCAGACGCCGGA CGT TCCGACGCCTGT CGATTGCATCAGGCA TERM 7019 5185946 - 5185922 - R 87 -14.3 -2.77013 | opp_overlap 5185922 5185937, overlap 5185921 5185924 GATTTTGTTAATAAT CAGACGCCGGA CGT TCCGACGCCTG TCGATTGCATCAGGC TERM 7020 5185944 - 5185924 - R 75 -11.1 -2.93073 | opp_overlap 5185922 5185937, overlap 5185922 5185921 TTTTGTTAATAATCA GACGCCGGA CGT TCCGACGCC TGTCGATTGCATCAG ECUMN_5018 5186372 - 5185956 - | hypothetical protein ECUMN_5019 5187297 - 5186398 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase, putative fabG protein ECUMN_5020 5188225 - 5187215 - | putative Aldo/keto reductase TERM 7021 5187385 - 5187397 + gH 75 -9.1 -3.66921 | overlap 5187382 TTGCCAGCGCGAACT GCAGC GCA GCTGC TTTAACGTTCACATT ECUMN_5021 5188266 - 5189246 + | putative HTH-type transcriptional regulator alsR TERM 7022 5189281 - 5189249 - T 74 -5.5 -4.63218 | opp_overlap 5189251, overlap 5189250 5189251 GCGCGGTGAATAAAA CGTTAAGCGGGAACC ATG AGTTCCCGCTTGATT TGAGGTGTCAGTCCG TERM 7023 5189280 - 5189250 - T 71 -9 -3.3761 | opp_overlap 5189251, overlap 5189249 5189251 CGCGGTGAATAAAAC GTTAAGCGGGAACC ATG AGTTCCCGCTTGAT TTGAGGTGTCAGTCC TERM 7024 5189251 - 5189279 + T 100 -14 -3.64103 | opp_overlap 5189250 5189249 5189251 GCGGTGAATAAAACG TTAAGCGGGAAC CATGA GTTCCCGCTTGA TTTGAGGTGTCAGTC TERM 7025 5189279 - 5189251 - T 81 -12.5 -2.62244 | opp_overlap 5189251, overlap 5189250 5189249 GCGGTGAATAAAACG TTAAGCGGGAACC ATG AGTTCCCGCTTGA TTTGAGGTGTCAGTC TERM 7026 5189392 - 5189359 - T 95 -13.1 -3.3903 | opp_overlap 5189359, overlap 5189361 TAATCATTTAACTAA TACCGGATGCGATGC TGGC GCGCCGCACCCGGCA TTTTACGCATTACTT TERM 7027 5189359 - 5189392 + T 80 -8.7 -4.15508 | opp_overlap 5189359 5189361 TAATCATTTAACTAA TACCGGATGCGATGC TGGC GCGCCGCACCCGGCA TTTTACGCATTACTT TERM 7028 5189390 - 5189361 - T 93 -13.5 -3.25919 | opp_overlap 5189359, overlap 5189359 ATCATTTAACTAATA CCGGATGCGATGC TGGC GCGCCGCACCCGG CATTTTACGCATTAC yjjK 5191069 - 5189402 - | fused putative transporter subunits of ABC superfamily: ATP-binding components TERM 7029 5189452 - 5189464 + g 90 -4.7 -5.36965 | overlap 5189443 GCTCCAGCGCGTCTG CGCCC AGC GTGCG TTTTTTGTACTCTTC TERM 7030 5192180 - 5192195 + G 71 -9 -3.42056 | opp_overlap 5192180 GACGAACAGGCGAAA TGGCGT GATG ACGCCA TTATGCGTTCGCAAT TERM 7031 5192195 - 5192180 - g 73 -9 -3.67517 | opp_overlap 5192180 GACGAACAGGCGAAA TGGCGT GATG ACGCCA TTATGCGTTCGCAAT slt 5191280 - 5193217 + | lytic murein transglycosylase, soluble TERM 7032 5193288 - 5193262 - f 88 -12.2 -3.4252 | overlap 5193263 CTTTAGCGAGTACAA CCGGGGGAGGCA TTT TGCTTCCCCCGC TAACAATGGCGACAT TERM 7033 5193287 - 5193263 - f 93 -15.7 -2.65298 | overlap 5193262 TTTAGCGAGTACAAC CGGGGGAGGCA TTT TGCTTCCCCCG CTAACAATGGCGACA TERM 7034 5193349 - 5193368 + G 72 -6.4 -4.3898 | opp_overlap 5193348 5193349 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 5193307 - 5193633 + | DNA-binding transcriptional repressor, tryptophan-binding yjjX 5194151 - 5193627 - | thiamin metabolism associated protein TERM 7035 5193976 - 5193991 + g 72 -8.2 -3.76224 | TTTGCTACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA ytjC 5194194 - 5194841 + | phosphoglyceromutase 2, co-factor independent rob 5195707 - 5194838 - | DNA-binding transcriptional activator TERM 7036 5196364 - 5196352 - g 74 -6.2 -4.56775 | opp_overlap 5196351 5196352 AGGTTCGCCGAAAAA CGCG ATTAG CGCG GTTCCTGTCATGCCG creA 5195918 - 5196391 + | hypothetical protein creB 5196404 - 5197093 + | DNA-binding response regulator in two-component regulatory system with CreC creC 5197093 - 5198517 + | sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon TERM 7037 5199249 - 5199263 + G 77 -2.8 -5.13521 | opp_overlap 5199249 GACCTTAACCAGCAA CTGG CCGCATC CCAG TTTTTTAGGTGATTT creD 5198575 - 5199927 + | inner membrane protein TERM 7038 5199967 - 5199938 - T 100 -13.7 -4.64144 | opp_overlap 5199944, overlap 5199944 AATAAGGTTGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTT TTGACGGTGGTAAAG TERM 7039 5199944 - 5199961 + T 100 -12.7 -5.76949 | opp_overlap 5199938 5199944 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTTGACGGTG TERM 7040 5199961 - 5199944 - T 100 -12.7 -5.61881 | opp_overlap 5199944, overlap 5199938 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTTGACGGTG arcA 5200703 - 5199987 - | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA TERM 7041 5200212 - 5200224 + g 71 -9.1 -3.44051 | opp_overlap 5200199 CATGGCGCGGAACTC GCTGC GCG GCAGC TTGTACTGCTCGCCA yjtD 5201339 - 5202025 + | rRNA methyltransferase