TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.48284 %AT, 4480090 nt, 37216 terms. Intergenic: 0.564419 %AT, H2T: 777232 nt, 4726 terms; T2T: 207488 nt, 3537 terms; H2H: 334340 nt, 3298 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|91206245|ref|NC_007941.1| Escherichia coli UTI89 plasmid pUTI89, complete sequence (length 114230) UTI89_P001 1 - 591 + | hypothetical protein TERM 1 649 - 627 - f 72 -8.5 -3.57561 | opp_overlap 618 GTCCAACCCCGGAAA CGGGAAAAA GCAAG TTTTCCCCG CTCCCGGCGTTTCCA repB 831 - 1091 + | replication protein TERM 2 1100 - 1088 - f 70 -6.3 -4.20368 | opp_overlap 1088 1087, overlap 1084 TGATGCGAATAGAAA GTAAC TAA GTTAC CTTCTTGAACATTTG TERM 3 1271 - 1227 - f 91 -7.3 -5.25735 | gap 1 CCAAAAAAGCAAAAA CCCCGATAATCTTTCTATGT TTGGCG ACGAAGAA-GATTACCGGGG CTAACAAGAAACCGT TERM 4 1310 - 1283 - f 77 -7 -4.44667 | opp_overlap 1303 GGGGCTAACAAGAAA CCGTATAGCCAA CAAT TCAGCTATGCGG GGAGTATAGTCATAT UTI89_P003 1324 - 1398 + | leader peptide RepL TERM 5 1519 - 1501 - g 70 -5.9 -4.22948 | opp_overlap 1501 1500 1503 AAAACTGATGGAAAA GGCGGTG GGCTT CACCTCC CGTTTTGATTTCGCC TERM 6 2079 - 2045 - g 72 -4.9 -4.63218 | gap 1 TCCCGTGGAATAAAA CGTGCCC-GTGCGCGT CGTG ATGCGAACAGGGAACG TCAGGATATCGTCAC repA1 1391 - 2248 + | replication protein TERM 7 2284 - 2269 - Tf 80 -10.4 -3.79113 | ACCTCCTCAGAATAA TCCGGC CTGC GCCGGA GGAATCCGCACGTCT TERM 8 2785 - 2735 - Tf 100 -21.2 -2.57132 | opp_overlap 2735 2741, overlap 2720 2741 GCCCCTCCTCATAAC TGAAAAGCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 9 2735 - 2785 + TF 100 -14.6 -3.43961 | opp_overlap 2720 2735 2741, overlap 2741 GCCCCTCCTCATAAC TGAAAAGCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGCTTTTAA TTATGAATGTTGTAA TERM 10 2741 - 2779 + TF 100 -13.6 -4.50058 | opp_overlap 2720 2741 2735, overlap 2735 CCTCATAACTGAAAA GCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGC TTTTAATTATGAATG TERM 11 2779 - 2741 - Tf 100 -20.2 -4.3208 | opp_overlap 2735 2741, overlap 2720 2735 CCTCATAACTGAAAA GCGGCCCCGCCCCGGCCC GAA GGGCCGGAACAGAGTCGC TTTTAATTATGAATG TERM 12 3022 - 3036 + TF 70 -9.2 -3.16088 | opp_overlap 3011, overlap 3021 ATCAGTACCGGCTTA CGCCGG GCT TCGGCG GTTTTACTCCGGTAT TERM 13 3081 - 3096 + TF 71 -10.4 -2.79501 | opp_overlap 3068 GAGCGCCGCCTTCCA TGCCGC TGGC GCGGCA TATCCTGGACGTATA TERM 14 3140 - 3126 - Tf 76 -2.8 -5.22943 | AGGAAATTGAAAAAA CAATCG ATA CCATTG TCCACGCCTTATGCC TERM 15 3177 - 3191 + TF 74 -7.1 -4.20086 | ACCTTTCTGCTTTTC CCACC ACTCC GGTGG TTTCTCTCTCTGTAT TERM 16 3261 - 3282 + TF 71 -3.7 -4.77036 | overlap 3263 3265 TGTTGCAAATAGTCG GTGGTGATA AACT TATCATCCC TTTTTGCTGATGGAG UTI89_P005 3831 - 3238 - | putative transposase TERM 17 3587 - 3611 + Gg 81 -5 -5.05601 | gap 1 ATCTGTACCGGGCCG TCGACAG-CCG GGGC CGCACTGTCGA TTTTTATCTCTCCTC TERM 18 3742 - 3721 - Gg 72 -7.9 -3.98172 | gap 1, opp_overlap 3721 ATCAACACGGATAAA GCGCCCG-CC TAT GGTCGCGCGC TTGCTCTGCTCAAAC UTI89_P006 3292 - 4008 + | transposase for IS26 scsC 4056 - 4265 + | secreted copper-sensitivity suppressor C scsD 4255 - 4761 + | secreted copper-sensitivity suppressor D TERM 19 4767 - 4784 + F 100 -12.7 -5.03145 | CATGTTTTGATAGCG TGCCGGG GAAA CCCGGCA TTTTTTAACCCATTG UTI89_P009 4998 - 5759 + | Na(+)-translocating NADH-quinone reductase subunit C TERM 20 5790 - 5831 + F 87 -10.2 -4.329 | opp_overlap 5815, overlap 5827 ATAACGCGTTTTATT TCTGCCTGCCGATAATGA ATAATA TCACTGTCGGCAGGGGGA TTTATTCCTCTGTTA TERM 21 6013 - 6027 + F 70 -5.8 -4.40333 | opp_overlap 6011 6013 CGCGACAAAAAGATA TGATAA TAA TTATCA TTTGTATTCTTTGGC UTI89_P010 6106 - 7992 + | hypothetical protein TERM 22 8279 - 8269 - g 74 -2.4 -5.14645 | AGAAGGCAATAAAAA CGGC TTT GGCG CAGGGGAATGGATCC TERM 23 8362 - 8345 - g 70 -4.1 -4.59109 | overlap 8348 8351 GACACGGGCGAAAAA CAGGAAG GCAC CTTCATG CCGATGGTTGCCAGC UTI89_P011 8033 - 8560 + | hypothetical protein TERM 24 8562 - 8617 + F 100 -18.3 -2.62983 | opp_overlap 8546 8545 8543 8563 8567, overlap 8575 8582 TCGGTCTGAACTAAA ACCGACTAACCAACGCGCCAGGAGG ATTCCC CCTTCTGGCGCGTTGGTCAGACCGA TCATATGCCCGTCGC TERM 25 8616 - 8563 - f 100 -22.5 -4.4078 | opp_overlap 8562 8575 8582, overlap 8546 8545 8543 8567 CGGTCTGAACTAAAA CCGACTAACCAACGCGCCAGGAGGA TTCC CCCTTCTGGCGCGTTGGTCAGACCG ATCATATGCCCGTCG TERM 26 8612 - 8567 - f 100 -24.9 -2.80479 | opp_overlap 8562 8575 8582, overlap 8545 8543 8563 CTGAACTAAAACCGA CTAACCAACGCGCCAGGAGGA TTCC CCCTTCTGGCGCGTTGGTCAG ACCGATCATATGCCC TERM 27 8575 - 8604 + F 100 -17.2 -3.14344 | opp_overlap 8567 8563, overlap 8562 8582 AAACCGACTAACCAA CGCGCCAGGAGG ATTCCC CCTTCTGGCGCG TTGGTCAGACCGATC TERM 28 9151 - 9171 + G 78 -12.5 -2.87003 | overlap 9148 9164 9167 TGCTGGTGATGATCT GGCTGCCGC TGA GCGGCAACC TGCTGTTGTTGCTGA UTI89_P012 8664 - 10043 + | hypothetical protein UTI89_P013 10046 - 11329 + | hypothetical protein TERM 29 11490 - 11500 + G 75 -5.4 -4.65895 | opp_overlap 11482 11481, overlap 11484 11483 GAAGAACTGCGCACC TTCG GCG CGAA TTTTTACATCGGGCC TERM 30 11574 - 11602 + G 81 -13.1 -2.57931 | overlap 11573 11576 CTCGATCAGGCGCCG CAGGGGCTGGTGC ATG GCGCCAGTCCGTG GTTGTACGGCATGGC UTI89_P014 11319 - 12449 + | putative integral membrane protein TERM 31 12558 - 12544 - g 73 -11.4 -2.57468 | opp_overlap 12539 12538, overlap 12543 CTGGATGACATTAAT CTGCGC ATT GCGCAG GGTGAATTTGTCGCC UTI89_P015 12454 - 13149 + | ABC transporter, ATP-binding protein TERM 32 13233 - 13201 - g 86 -6.8 -5.00196 | gap 1, opp_overlap 13201 13227 GTGTAAAGAAGAAAA GCTGGCGGTCGGGGC ACCG GCCCCGGC-GCTGGC GGCGTTTGATCTGCA UTI89_P016 13136 - 13621 + | putative thioredoxin-family protein UTI89_P017 13751 - 14131 + | hypothetical protein TERM 33 14272 - 14292 + F 80 -6.7 -4.81212 | overlap 14274 AAAAATTGATACTCG CCGCCGCTG TGG CAGGGGCTG TTTTATTGTCGTCCG TERM 34 14274 - 14290 + F 74 -7.9 -4.02119 | overlap 14272 AAATTGATACTCGCC GCCGCTG TGG CAGGGGC TGTTTTATTGTCGTC TERM 35 14611 - 14590 - f 71 -9.5 -3.06671 | gap 1, overlap 14602 ATACCTATGCCAACA GTCTGCAACG CAC CGTTGC-GAC GGCACAATTCTTTAT TERM 36 14694 - 14678 - f 90 -4.3 -5.55664 | opp_overlap 14684 TCATCAGGAAAAAAA TGGGCAC GAT GGACCCA ACGTTTAATCCGGTG TERM 37 14865 - 14851 - f 77 -3.5 -5.27335 | TCCTGCAAAGAAAAA CAGCA GTGTT CGCTG ACCGAAGCCAAAGAC TERM 38 14986 - 15001 + F 74 -3.2 -5.03747 | opp_overlap 14988, overlap 14988 GCAAACACATCGAAT CAGCCT ATTT AGGCTA TTTTTTCCACCATTT TERM 39 15009 - 15022 + F 70 -6.7 -4.01315 | TTAGGCTATTTTTTC CACCA TTTC TGGTG TTATTTCCGGTTTTT TERM 40 15387 - 15402 + F 71 -8.2 -3.72893 | CACGCCATCAACGCC GGGGGT ATGG GCCCCC TTTGATGAAAGCGTG UTI89_P018 15493 - 15918 + | hypothetical protein UTI89_P019 15809 - 16204 + | hypothetical protein UTI89_P021 16936 - 16610 - | putative transposase OrfA protein of insertion sequence IS629 UTI89_P020 16439 - 16855 + | hypothetical protein UTI89_P022 17038 - 17298 + | hypothetical protein TERM 41 17429 - 17417 - g 70 -10.5 -2.83403 | overlap 17416 GGTGCTGGAGCAAAG CGGGG AAG CCCCG GTCTACGGGCCAAAC UTI89_P023 17295 - 17804 + | hypothetical protein UTI89_P024 18132 - 17824 - | hypothetical protein TERM 42 18087 - 18118 + g 81 -6.4 -4.81551 | opp_overlap 18090 18092, overlap 18090 GCCAGAGAATACGCA GAAGAGGAGGGGCA TAAT TGCTCCGCCACATC TTTTTGCTGTCCATC UTI89_P025 18200 - 18322 + | hypothetical protein TERM 43 18324 - 18312 - g 70 -3.5 -4.7219 | opp_overlap 18312 CAGATGAACAGAAAA TATTA TTT TAATA ATATGTGGTGGGGAT UTI89_P026 18300 - 18635 + | immunity protein TERM 44 18611 - 18650 + F 93 -9.6 -4.90778 | gap 1, opp_overlap 18619 18635, overlap 18617 18619 TATTCTTTCTGTTAT TATAA-AAAGGCTGTCTGT AAG ATAGACAGCCTGTCTTATA TTTTATTTAAATACC TERM 45 18617 - 18643 + F 78 -10.2 -3.63424 | opp_overlap 18619 18635, overlap 18611 18619 TTCTGTTATTATAAA AAGGCTGTCTGT AAG ATAGACAGCCTG TCTTATATTTTATTT TERM 46 18641 - 18619 - f 100 -10.6 -4.91109 | opp_overlap 18617 18611 18619, overlap 18635 CTGTTATTATAAAAA GGCTGTCTGT AAG ATAGACAGCC TGTCTTATATTTTAT TERM 47 18619 - 18641 + F 90 -12.8 -3.35613 | opp_overlap 18619 18635, overlap 18617 18611 CTGTTATTATAAAAA GGCTGTCTGT AAG ATAGACAGCC TGTCTTATATTTTAT TERM 48 19519 - 19530 + F 91 -2.2 -5.83226 | CTAAGAATAAGCTTA TAGC TGGG GCTG TTTTTTTGTTGAATT TERM 49 19811 - 19795 - f 76 -6.5 -4.55287 | opp_overlap 19795 TTGAGGGAGAGAAAA CGTGTCA TTT TGACCCG TTCGGTATTCAGAAC TERM 50 21664 - 21648 - g 93 -2.1 -5.72207 | overlap 21649 21652 CCTAAAGGAAAAAAA TCCACTG CAC CTGTGGT ACAAGAAGCTCTGCG cjrA 21105 - 21980 + | putative inner membrane lipoprotein cjrB 21988 - 22764 + | putative periplasmic colicin Js sensitivity protein CjrB cjrC 22933 - 25194 + | putative outer membrane colicin Js receptor TERM 51 25275 - 25264 - gT 74 -3 -4.90266 | opp_overlap 25264 TGCAGGAACGAAAAA TGAA TATT TTCA CTTTATCCAAAGCAC TERM 52 25463 - 25445 - gT 71 -3 -4.74801 | opp_overlap 25409 TAATGCCAGTAAAAA GGTGTTTG CAG CAGTCACC GATCGTGTAAATCGT TERM 53 25929 - 25915 - gT 77 -2.8 -5.1675 | overlap 25928 CGATGGATGAAAAAA CACAGA AAA TCTACG TTGGCGGAAGAGATT senB 25164 - 26438 + | enterotoxin TieB protein TERM 54 26640 - 26667 + T 82 -7.1 -4.7153 | gap 1, overlap 26643 CACAGCTATGCCTGT TCATGGGGTTCT AGGCC GGAACCCCA-GA TTTTTCCGATTGTTT UTI89_P031 27227 - 26961 - | transposase UTI89_P032 27292 - 27618 + | hypothetical protein TERM 55 27752 - 27770 + T 71 -8.1 -3.75105 | TGGCCGCACCCTTCA GTGCGAC ATCAA GTCGCGC TTGTTACTGCCTTCG UTI89_P033 28515 - 27760 - | insertion sequence ATP-binding protein TERM 56 28279 - 28245 - G 90 -14.4 -2.87132 | opp_overlap 28236 28234 CTGTCGTTTCACAGA GTTGCCGGAACTGA GCTCCAT TCAGTTCCGGCACC TGACTGAAGTCGTAT UTI89_P034 30011 - 28512 - | hypothetical protein TERM 57 29860 - 29874 + g 83 -5.7 -5.02476 | overlap 29852 TCTTTGCGTGTGCGC CAGTG CCGAA CACTG TTTTTTGCCCACTCT UTI89_P035 30811 - 30440 - | hypothetical protein UTI89_P036 31151 - 30726 - | hypothetical protein TERM 58 31257 - 31242 - gH 72 -8.2 -3.72893 | CACGCTTTCATCAAA GGGGGC CCAT ACCCCC GGCGTTGATGGCGTG UTI89_P037 31120 - 32628 + | hypothetical protein TERM 59 32676 - 32709 + FH 71 -8.9 -3.29471 | gap 1, opp_overlap 32678 32688, overlap 32694 CCGGTTCGGGGAGGA GAGGCAGGGAAATAGT CCG ACTACG-CCCTGCCTC TTACTCTACTCAGCA UTI89_P038 33130 - 33534 + | hypothetical protein UTI89_P039 33531 - 33878 + | hypothetical protein TERM 60 34755 - 34791 + F 72 -9.4 -3.17075 | gap 1, opp_overlap 34722 CTACGTTCGTGACGA CCGTAACGCCGG-GTCA ACGC TGGCGCCGGCGGTGTGG TTCGCTTACAGCCCG TERM 61 34936 - 34954 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT TERM 62 35007 - 34992 - g 70 -4.6 -4.56914 | overlap 34993 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC UTI89_P040 34958 - 35980 + | putative transposase TERM 63 36061 - 36047 - g 80 -11.4 -3.3506 | overlap 36038 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG UTI89_P041 35977 - 36759 + | transposase/IS protein UTI89_P042 38286 - 37498 - | hypothetical protein UTI89_P043 40266 - 38296 - | putative hemin receptor TERM 64 40287 - 40306 + H 85 -8 -4.71426 | opp_overlap 40286 AATATATGTTAATAT TGATATGT TATA ACATATCA TTTTATTAATGCAAC UTI89_P044 40548 - 40913 + | insertion sequence 2 OrfA protein pixB 41509 - 41781 + | hypothetical protein TERM 65 41902 - 41932 + F 70 -2.6 -4.93661 | overlap 41903 TATTTTAAAGAAAAC TCTGTCATTCATCA TTT TGTTTAATGATAGG TTTTGTTATTAATAT TERM 66 43616 - 43605 - f 100 -3 -5.94743 | TAAAAAAAATAAAAA TGAT CATA ATCA ATGATAGAATAGTTG TERM 67 44114 - 44098 - f 74 -3.7 -4.92791 | opp_overlap 44111, overlap 44088 CATAACATAATAAAA TATGCTT ATT ATGCATA ACCTTATGTTGTGAC UTI89_P046 44164 - 44352 + | serine-threonine protein kinase UTI89_P047 44334 - 44462 + | hypothetical protein TERM 68 44801 - 44779 - gT 90 -9 -4.56775 | overlap 44781 ATCCTGTCCGAAAAA GTGCGTGCGC GAC GCGGACGCCC GCCAAAAGATGAAGT TERM 69 44799 - 44781 - gT 70 -10.2 -2.60032 | overlap 44779 CCTGTCCGAAAAAGT GCGTGCGC GAC GCGGACGC CCGCCAAAAGATGAA TERM 70 44881 - 44901 + GT 76 -10.4 -3.30124 | gap 1, opp_overlap 44864 TGGATGATCACCACC CGGC-CCCG CCGG CGGGAGCCG TTATGGCCGGTCACG UTI89_P049 45219 - 44902 - | hypothetical protein int 44473 - 45213 + | site-specific recombinase TERM 71 45408 - 45452 + TFrH 100 -18.9 -3.0264 | opp_overlap 45408 45412, overlap 45412 CTGCACCTGTTAATA TAAACTGTAGTCAGTAAAGAG TCT CTCTTATCTGACTACAGTTTA TGTTCAGCGGGATTT TERM 72 45452 - 45408 - TfRH 100 -18.9 -3.03124 | opp_overlap 45408 45412, overlap 45412 CTGCACCTGTTAATA TAAACTGTAGTCAGTAAAGAG TCT CTCTTATCTGACTACAGTTTA TGTTCAGCGGGATTT TERM 73 45412 - 45448 + TFrH 100 -15.3 -4.1891 | opp_overlap 45408 45412, overlap 45408 ACCTGTTAATATAAA CTGTAGTCAGTAAAGAG TCT CTCTTATCTGACTACAG TTTATGTTCAGCGGG TERM 74 45448 - 45412 - TfRH 100 -15.3 -4.19177 | opp_overlap 45412 45408, overlap 45408 ACCTGTTAATATAAA CTGTAGTCAGTAAAGAG TCT CTCTTATCTGACTACAG TTTATGTTCAGCGGG UTI89_P050 46433 - 45456 - | replication protein RepFIB (P307 replicon) TERM 75 45918 - 45905 - GfH 70 -3.7 -4.64766 | GGTACAGTTCAAAAA GGCGG GGAT CAGCC TGTAACTGAACAATA UTI89_P051 46171 - 46500 + | hypothetical protein ydiA 48249 - 47608 - | hypothetical protein TERM 76 47805 - 47821 + gFH 74 -2.2 -5.10767 | opp_overlap 47805 AACATTCTGTAATGA TCACCA TTGGC TGGCGA TTTTTCTGTTCAGTA TERM 77 48397 - 48425 + Gr 100 -14.7 -3.32807 | CACATATTCTTTTCG CAGTTATCCCCAG AAT CTGTGGATAACTG TTGCTCCTCTTTTGA UTI89_P053 48236 - 48466 + | hypothetical protein TERM 78 48630 - 48678 + Tr 100 -20.5 -3.63694 | opp_overlap 48635, overlap 48635 48639 TCGTTTTTACATCTG TAAAAGCAACAGGGCCCCATGAT TAT ATCATGGGGCCCTGTTACTCTGA TTCTTCGCAATAGAT TERM 79 48673 - 48635 - TR 100 -27 -4.13014 | opp_overlap 48630 48635 48639 TTTACATCTGTAAAA GCAACAGGGCCCCATGAT TAT ATCATGGGGCCCTGTTAC TCTGATTCTTCGCAA TERM 80 48635 - 48673 + Tr 100 -24.8 -3.01745 | opp_overlap 48635, overlap 48630 48639 TTTACATCTGTAAAA GCAACAGGGCCCCATGAT TAT ATCATGGGGCCCTGTTAC TCTGATTCTTCGCAA TERM 81 48639 - 48669 + Tr 100 -24.2 -3.35176 | opp_overlap 48635, overlap 48635 48630 CATCTGTAAAAGCAA CAGGGCCCCATGAT TAT ATCATGGGGCCCTG TTACTCTGATTCTTC TERM 82 48926 - 48944 + Tr 91 -6.7 -5.36441 | gap 1, overlap 48927 TATGAATGTGTCTGT C-CCCTCC TTCG GGAGGGTG TTTTTTATCTGGAAA TERM 83 48927 - 48942 + Tr 87 -10.4 -4.31943 | overlap 48926 ATGAATGTGTCTGTC CCCTCC TTCG GGAGGG TGTTTTTTATCTGGA TERM 84 49095 - 49077 - TR 100 -11.7 -5.76949 | opp_overlap 49079 TATTGGTAAAAAAAA CACCCCC GTAGT GGGGGTG TTGAGACTTCAACCT UTI89_P054 49379 - 49212 - | hypothetical protein yeaA 49933 - 49706 - | hypothetical protein TERM 85 49851 - 49882 + g 95 -14.6 -3.21099 | overlap 49855 CTTGAAGCTGGATGG GGAGGTATTACGGC TTTA GCCGTAATACTTTC TTCGTCCTCGCAGCG TERM 86 49855 - 49878 + g 100 -14 -4.2704 | overlap 49851 AAGCTGGATGGGGAG GTATTACGGC TTTA GCCGTAATAC TTTCTTCGTCCTCGC TERM 87 50077 - 50089 + H 72 -5.5 -4.4518 | overlap 50070 TTGTTGTTGCTATTT CTGGC TTA GTCAG TTTTGAATTTTGCTT ccdA 50571 - 50789 + | plasmid maintenance protein CcdA ccdB 50770 - 51096 + | plasmid maintenance protein CcdB UTI89_P059 51780 - 51100 - | hypothetical protein TERM 88 51452 - 51439 - Gg 77 -5.9 -4.66609 | overlap 51440 CAGCGGACCGAAAAA GCCGC CAGG ACGGC AGGAAGAACGCCTGC rsvB 51097 - 51906 + | resolvase TERM 89 51911 - 51937 + Tr 73 -9 -3.48276 | opp_overlap 51907 51911 51915, overlap 51907 51902 51915 GACACGCATAATTCA TAAATCATAATT ATG AATTGTGATTTA TTCTGTAAAAAAAGA TERM 90 51915 - 51933 + Tr 70 -5.4 -4.38927 | opp_overlap 51907 51911 51915, overlap 51907 51902 51911 CGCATAATTCATAAA TCATAATT ATG AATTGTGA TTTATTCTGTAAAAA TERM 91 51974 - 51951 - TR 84 -4.6 -5.41143 | opp_overlap 51951 51972 TATTCTGTAAAAAAA GAGACCAC TGCAATAT GTGATCTC TTGTATGCAAGGGTG UTI89_P060 52319 - 52044 - | hypothetical protein TERM 92 52179 - 52190 + g 70 -4.4 -4.58563 | TTCACCAAGAGAGAT TGTC GTCC GACA TTGTTTTTCTGGTTC TERM 93 52237 - 52262 + g 72 -8.3 -3.80733 | gap 1 CCGTATGGTTTATCC GCA-AGGCGCTG AGC CAGAGCCTCTGC TTGTTCTACCGTAAC UTI89_P061 52957 - 52313 - | hypothetical protein stbA 53186 - 54157 + | stable plasmid inheritance protein TERM 94 54515 - 54481 - g 74 -2.7 -5.01732 | AATCTGTTGAAAAAA TGCCTCCTTCTGCTA CTGAT TCGGTGCAGGAGGCA ATGAATGATGTGCGT stbB 54162 - 54554 + | stable plasmid inheritance protein TERM 95 54567 - 54546 - T 84 -4.5 -5.46698 | overlap 54549 CTTAAAATGAAAAAA TTATTCTGA TATA TCAGAATGA AGCAATGGGGATCTC impA 56266 - 55829 - | UV protection and mutation protein impC 56511 - 56263 - | UV protection and mutation protein UTI89_P066 56646 - 57164 + | hypothetical protein UTI89_P067 57183 - 58403 + | transposase TERM 96 58530 - 58564 + G 78 -7.9 -4.386 | gap 1, overlap 58562 GTGTGGCTGTATGCC TGCTGTGGA-CTGCTG TGTC CAGCTTATCCACAGCA TTTTGTGCACGGTTC UTI89_P068 58515 - 58784 + | hypothetical protein TERM 97 58761 - 58777 + F 70 -9.4 -2.87132 | GTTACAGGTGCGGCA CGGCCT GATGG AGGCCG TATGTGAGAGGAGAA TERM 98 58875 - 58890 + G 72 -6.1 -4.36914 | opp_overlap 58864 TAAACGGCTGGCCAG CGGTG CAGTCA CACCG TTTTATCGCCGCGCC TERM 99 59538 - 59522 - g 71 -9.3 -3.44146 | TTGTTGCAGAATTAA GCCGCCG TTT CGGCTGC ACGCTGGAGCACTGG yccB 58798 - 59652 + | hypothetical protein istB 60443 - 59646 - | IS21 putative ATP-binding protein istA 61615 - 60443 - | transposase for insertion sequence element IS21 TERM 100 60773 - 60793 + gH 77 -9.7 -3.59979 | overlap 60769 60777 TTCCTGCTCCAGCGC GAAGCGCTG TTC CGGCGTTTC TTTGAACTGGCGAAG TERM 101 60777 - 60789 + gH 75 -6.9 -4.44046 | overlap 60769 60773 TGCTCCAGCGCGAAG CGCTG TTC CGGCG TTTCTTTGAACTGGC UTI89_P072 61466 - 61687 + | hypothetical protein UTI89_P073 61656 - 61859 + | hypothetical protein TERM 102 61869 - 61894 + G 100 -16.9 -4.13767 | overlap 61873 GGATGAAGTATGACG GAGACGGGCGG GCAA CCGCCCGTTTC TTTTCCGGTAAAGGA TERM 103 61873 - 61890 + G 100 -14.1 -4.67048 | overlap 61869 GAAGTATGACGGAGA CGGGCGG GCAA CCGCCCG TTTCTTTTCCGGTAA yfbA 61856 - 62167 + | hypothetical protein UTI89_P075 62243 - 62926 + | putative methylase TERM 104 62963 - 62951 - g 71 -3.3 -4.8048 | overlap 62935 62932 62953 GCCGGACACGAAAAA CTTCG CGC CGACG TGGCGGAGGTGGCCA yfeB 62927 - 63148 + | hypothetical protein yfcB 63162 - 63596 + | hypothetical protein TERM 105 64202 - 64212 + G 75 -4.6 -4.7497 | overlap 64192 GATGCCATCCTGAAC CGGG GCG CTCG TTTTTCGTCGGTGGA ycfA 63641 - 64411 + | hypothetical protein TERM 106 64419 - 64438 + F 91 -11.4 -4.14739 | GGAAATGATGACGCT GGCGGGGA AAAA TCTCCGCC TTTTCCAGTCGGTCC TERM 107 64497 - 64515 + F 81 -11 -3.52515 | overlap 64490 GGCTCCTCTTTACCC GGCCATGT GGG GCATGGCC TTGTGGGTTTTCAGT TERM 108 65081 - 65097 + G 70 -10.9 -2.76189 | overlap 65078 CCGTACCGTGAGTGC TGATGCC GCA GGCATCA TCCTTACCTCCCTTG yciB 64827 - 65252 + | hypothetical protein TERM 109 65281 - 65261 - f 86 -13.9 -2.57244 | overlap 65257 TGACTGATTAACGGA CGGGGCGGC AAT GCCGCCCCT GTAAAGGAGACGAGA UTI89_P080 65299 - 65721 + | hypothetical protein UTI89_P081 65718 - 65909 + | hypothetical protein UTI89_P083 66380 - 65886 - | hypothetical protein TERM 110 65975 - 66022 + GgF 100 -28.6 -4.04318 | GCAGGCTGGCGCCTG CCGGAAGGGTAACGGGCCACGC TGGC GCGTCGCCCGTTACCCTTCCCG TTTGTGATGTGTCCG ycjB 65773 - 66156 + | hypothetical protein UTI89_P084 66029 - 66388 + | hypothetical protein UTI89_P085 66613 - 66356 - | hypothetical protein TERM 111 66505 - 66448 - G 81 -10.9 -3.60098 | opp_overlap 66457 66464, overlap 66464 ACTGTCCAGGGTAAA TGAACAGCCCACAAAATTTTTTACC CAAAACCC GGTAAAAAATTTTGCGTTCTGCCCA GGACAGGTGCGTCAG TERM 112 66801 - 66785 - RH 100 -12.3 -5.24989 | opp_overlap 66785 GCAGATATGAAAAAA GCAGGTC AGG GACCTGC TTAATCCATGCCGCA TERM 113 66785 - 66801 + rH 86 -12.3 -3.18264 | opp_overlap 66785 GCAGATATGAAAAAA GCAGGTC AGG GACCTGC TTAATCCATGCCGCA UTI89_P087 67150 - 66890 - | hypothetical protein TERM 114 66982 - 67005 + Gg 77 -8.8 -4.07568 | opp_overlap 66981 66967 66998 CCCCGTGCTGAAAGC CTTCGGGCGA CACA TAGCCCGGAG TTTTCACCGGGGGCG UTI89_P086 66872 - 67102 + | hypothetical protein TERM 115 67616 - 67600 - g 76 -7.9 -4.1899 | opp_overlap 67597 GCAGCGTATTGAAAA CGGCATG AAA CGTGCCG TGATGCTCTTTGAAC ydbA 67154 - 68515 + | hypothetical protein TERM 116 68547 - 68520 - f 77 -11.2 -2.7487 | overlap 68516 68517 68535 CACAGAAATAAGGTA TATCCCCCCGGG AAAT CCCCGGGGGATG ACGGAGATAATGACA TERM 117 68640 - 68652 + G 90 -7.7 -4.88736 | GTTGCTGAAATCCGG GCTGA ATC TCAGC TTTTTGTGAGTCCTG TERM 118 69050 - 69077 + G 78 -9.1 -3.99678 | gap 1 GTTACCGTTTTCTGA CGT-CCGCGAGG AGCTG CCGCGCGGCACG TTTGCTTATACCGAT UTI89_P089 68562 - 69125 + | hypothetical protein TERM 119 69224 - 69201 - T 100 -15.2 -3.53012 | opp_overlap 69201 69220 TCGGTGGCGCTGAAA GGGGCCGCGC TCAC GCGCCGCCCC TTTCATTACGCGGAC TERM 120 69201 - 69224 + T 100 -15.2 -3.90112 | opp_overlap 69201, overlap 69220 TCGGTGGCGCTGAAA GGGGCCGCGC TCAC GCGCCGCCCC TTTCATTACGCGGAC UTI89_P090 69669 - 69211 - | hypothetical protein UTI89_P091 69906 - 69670 - | hypothetical protein TERM 121 69798 - 69741 - G 81 -10.9 -3.60098 | opp_overlap 69750 69757, overlap 69757 ACTGTCCAGGGTAAA TGAACAGCCCACAAAATTTTTTACC CAAAACCC GGTAAAAAATTTTGCGTTCTGCCCA AGACAGGTGCGTCAG ssb 69932 - 70498 + | single-stranded DNA-binding protein ydeA 70549 - 70788 + | hypothetical protein TERM 122 70819 - 70794 - f 74 -11.1 -2.50699 | overlap 70793 70791 70810 TCTTAAGTAAGAGAG GTGCCGGACGC GCAA ACGTCCGGCAG GACATAAGCAATTAT TERM 123 72607 - 72586 - g 70 -6.7 -4.10552 | gap 1 GCCGACGAAAGCAAA CTTTTTC-GG ACA CCTGAAAAAG CCGCAGATTATCGCA TERM 124 72624 - 72607 - g 70 -4.1 -4.64766 | gap 1 CGGACACCTGAAAAA GCCGCAGA TTA TC-GCAGC CCTGAATGAGGCAGG ycjA 70847 - 72805 + | hypothetical protein TERM 125 72840 - 72818 - f 83 -12.6 -3.03203 | overlap 72813 TGATGAACAACCACA TCGCCCCGCC GGA GACGGGGCGG CAGCAAGGGAGATAC psb1 72860 - 73294 + | plasmid SOS inhibition protein B TERM 126 73739 - 73708 - g 100 -13 -4.02334 | gap 1 GAGGCAGAGCAGAAA GCCCGTGCGTACCAG GCG CTGGT-CGCCCAGGC TGAAATCGAACTGGC UTI89_P096 73291 - 74010 + | plasmid SOS inhibition protein A TERM 127 74221 - 74188 - f 80 -7.6 -4.58466 | gap 1, overlap 74180 GGCAGAAGGACAAAA GCCCCGT-AGTTAAT TTTTC ATTAACCCACGAGGC CCCTGCATGCTTAGA TERM 128 74380 - 74370 - g 75 -6.8 -4.35116 | opp_overlap 74369 TATCTGACACGAAAA TCGC TGT GCGA GATTCGTTACAGAGA UTI89_P097 74228 - 74440 + | modulator of post-segregation killing protein flmA 74286 - 74444 + | small toxic polypeptide TERM 129 74454 - 74471 + T 100 -14.1 -4.10161 | opp_overlap 74448 AAGTAGCAACCTGGA GGCGGGC GCAG GCCCGCC TTTTCAGGGCTGATG TERM 130 74519 - 74544 + T 80 -8.9 -4.08144 | opp_overlap 74506, overlap 74503 AAGCGCCTTTATAAA GGGGCTGCTGG TTCG CCGGTGGTCCC TTTCTCCTTGCTGGC TERM 131 74619 - 74643 + T 100 -15.7 -4.08692 | opp_overlap 74622, overlap 74622 TCCGGGAACGGGGAT GAACGTGCGCC TGC GGCGCCCGTTC TTTTCCCCCGCCTTC TERM 132 74640 - 74622 - T 81 -11.6 -3.16742 | opp_overlap 74619 74622 GGGAACGGGGATGAA CGTGCGCC TGC GGCGCCCG TTCTTTTCCCCCGCC TERM 133 74622 - 74640 + T 93 -11.6 -4.17048 | opp_overlap 74622, overlap 74619 GGGAACGGGGATGAA CGTGCGCC TGC GGCGCCCG TTCTTTTCCCCCGCC TERM 134 74897 - 74927 + T 70 -9.7 -2.87564 | gap 2 TGACGCGAAACCCCG GGCTTGCAGCGACCG TTC CGGTCGC-GCC-GCC TCTGTCGCGCCGTGG UTI89_P099 75296 - 75060 - | hypothetical protein TERM 135 75188 - 75131 - G 81 -10.9 -3.60098 | opp_overlap 75140 75147, overlap 75147 ACTGTCCAGGGTAAA TGAACAGCCCACAAAATTTTTTACC CAAAACCC GGTAAAAAATTTTGCGTTCTGCCCA GGACAGGTGCGTCAG UTI89_P100 75360 - 75647 + | hypothetical protein TERM 136 76365 - 76355 - g 87 -4.6 -5.17488 | AAGATGAAAATAAAA CGCC AGT GACG CCTGAACAAATAATT TERM 137 76403 - 76379 - g 70 -5.8 -4.20367 | gap 1, overlap 76382 CGCCTGAACAAATAA TTA-CTCCCCG TCGT CGGGAAGATAA ACAGAACGATCTCTG UTI89_P101 75766 - 76587 + | hypothetical protein TERM 138 76637 - 76585 - T 100 -32.7 -2.56314 | opp_overlap 76585 76596 76601, overlap 76591 76596 76601 AGAAAGTGGAAGTCA TGATAATATAAGTAAAGCCCCGAAA ATT TTTCGGGGCTTTACTTATATTATCA TTCTTCGGCATCGCT TERM 139 76585 - 76637 + T 100 -32.7 -3.63694 | opp_overlap 76585 76591 76596 76601, overlap 76596 76601 AGAAAGTGGAAGTCA TGATAATATAAGTAAAGCCCCGAAA ATT TTTCGGGGCTTTACTTATATTATCA TTCTTCGGCATCGCT TERM 140 76631 - 76591 - T 100 -25.9 -3.44319 | opp_overlap 76585 76596 76601, overlap 76585 76596 76601 TGGAAGTCATGATAA TATAAGTAAAGCCCCGAAA ATT TTTCGGGGCTTTACTTATA TTATCATTCTTCGGC TERM 141 76626 - 76596 - T 100 -21.4 -3.77808 | opp_overlap 76585 76596 76601, overlap 76591 76585 76601 GTCATGATAATATAA GTAAAGCCCCGAAA ATT TTTCGGGGCTTTAC TTATATTATCATTCT TERM 142 76596 - 76626 + T 100 -21.4 -3.80597 | opp_overlap 76596 76591 76585 76601, overlap 76585 76601 GTCATGATAATATAA GTAAAGCCCCGAAA ATT TTTCGGGGCTTTAC TTATATTATCATTCT TERM 143 76621 - 76601 - T 100 -15.5 -4.09827 | opp_overlap 76596 76585 76601, overlap 76596 76591 76585 GATAATATAAGTAAA GCCCCGAAA ATT TTTCGGGGC TTTACTTATATTATC TERM 144 76601 - 76621 + T 100 -15.5 -4.09827 | opp_overlap 76601 76596 76591 76585, overlap 76596 76585 GATAATATAAGTAAA GCCCCGAAA ATT TTTCGGGGC TTTACTTATATTATC UTI89_P102 77392 - 76883 - | lytic transglycosylase TERM 145 77216 - 77260 + g 100 -23.1 -3.98075 | opp_overlap 77233 77248 CAGTCCGCTGCCATA TCCCGTTACCGGATTAATACC GAT GGCATTAACCCGGTAACGGGA TTCTTTCCATGATAT TERM 146 77619 - 77580 - H 93 -9.5 -4.95155 | opp_overlap 77583, overlap 77581 77583 77605 TTTACATTATAAAAA GGATTCATTGGTGAATC GCATAT GATTCACCAATGAATTT AACGCAACTCATAGA TERM 147 77618 - 77581 - H 100 -13 -3.5637 | opp_overlap 77583, overlap 77580 77583 77605 TTACATTATAAAAAG GATTCATTGGTGAATC GCATAT GATTCACCAATGAATT TAACGCAACTCATAG TERM 148 77616 - 77583 - H 100 -15.6 -3.34705 | opp_overlap 77583, overlap 77581 77580 77605 ACATTATAAAAAGGA TTCATTGGTGAATC GCATAT GATTCACCAATGAA TTTAACGCAACTCAT TERM 149 77583 - 77616 + H 100 -16.3 -3.5393 | opp_overlap 77583 77581 77580 77605 ACATTATAAAAAGGA TTCATTGGTGAATCG CATA TGATTCACCAATGAA TTTAACGCAACTCAT traM 77816 - 78199 + | conjugal transfer protein TraM TERM 150 78365 - 78327 - f 100 -12.4 -4.37198 | overlap 78328 78329 AATTGAAACTGAAAA TCGCCGATGCAGGGAGGT CTG AACTCCCTGCATCGACTG TCCATAGAATCCTTA TERM 151 78364 - 78328 - f 100 -15.9 -3.21234 | overlap 78327 78329 ATTGAAACTGAAAAT CGCCGATGCAGGGAGGT CTG AACTCCCTGCATCGACT GTCCATAGAATCCTT TERM 152 78363 - 78329 - f 100 -19.4 -2.52017 | overlap 78328 78327 TTGAAACTGAAAATC GCCGATGCAGGGAGGT CTG AACTCCCTGCATCGAC TGTCCATAGAATCCT traJ 78333 - 79079 + | functional relaxosome complex initiator TERM 153 79093 - 79110 + F 100 -5.5 -5.86965 | overlap 79095 AAATGTTAAATAAGG TGCGCCA ATTT TGGCGTG TTTTTTTTCGTCGGT TERM 154 79095 - 79108 + F 82 -8.1 -4.5787 | overlap 79093 ATGTTAAATAAGGTG CGCCA ATTT TGGCG TGTTTTTTTTCGTCG TERM 155 79301 - 79325 + G 74 -8.6 -3.918 | TATAGAGGTTCAGAT CCGTCTCAGA GATCA TCTGAAACGG TTTCCTGATTTCTAT traY 79173 - 79400 + | plasmid nicking protein traA 79434 - 79793 + | conjugal transfer pilin subunit TraA traL 79808 - 80119 + | conjugal transfer pilus assembly protein TraL traE 80141 - 80707 + | conjugal transfer pilus assembly protein TraE TERM 156 80926 - 80914 - g 71 -10.5 -2.89421 | opp_overlap 80914, overlap 80909 CCAATAATGAGCAGA CCGCC TCC GGCGG TGTGGTGGTGGCCAC TERM 157 80914 - 80926 + G 70 -10.5 -2.82516 | opp_overlap 80909 80914 CCAATAATGAGCAGA CCGCC TCC GGCGG TGTGGTGGTGGCCAC TERM 158 81198 - 81210 + G 72 -10.5 -3.10344 | opp_overlap 81190 AAGGAAACCCTGCAG GCCCC GGC GGGGC TGTCTTCAGTGGCAG traK 80694 - 81422 + | conjugal transfer protein TraK TERM 159 81924 - 81934 + G 81 -8.2 -4.37092 | GCGTTGCTGTTCCAC CGCC GAC GGCG TTTTATCCCGGGAAT traB 81422 - 82849 + | conjugal transfer pilus assembly protein TraB traP 82839 - 83429 + | conjugal transfer protein TraP trbD 83368 - 83736 + | conjugal transfer protein TrbD TERM 160 84131 - 84121 - g 81 -6.8 -4.6902 | overlap 84122 84123 TGAGAAGGCCAAAAA GCTG GAG CAGC CTGCAGATGCAAAGC TERM 161 84174 - 84145 - g 88 -12.2 -3.70902 | overlap 84123 GCCTGCAGATGCAAA GCC-GGCTGCGGCA TCAC TGCCGC-GCCTGGC TGAAGGGAACTTCCG TERM 162 84218 - 84195 - g 76 -11 -3.30159 | gap 1, opp_overlap 84209 GGAACTTCCGGACAA CCACGGTG-CG GGC CGTCACCGCGG CCAGCCCATCTGGCA traV 83978 - 84493 + | conjugal transfer protein TraV TERM 163 84512 - 84534 + F 72 -6.8 -4.2074 | opp_overlap 84516, overlap 84513 GCCCTGAAGTTGTAT ATCAGCCGGC AAT GCCGGCGGGC TTTCTGTATTCAAAA TERM 164 84513 - 84533 + F 73 -10.3 -3.11962 | opp_overlap 84516, overlap 84512 CCCTGAAGTTGTATA TCAGCCGGC AAT GCCGGCGGG CTTTCTGTATTCAAA TERM 165 84530 - 84516 - f 81 -12.8 -2.63631 | opp_overlap 84513 84512 TGAAGTTGTATATCA GCCGGC AAT GCCGGC GGGCTTTCTGTATTC traR 84628 - 84849 + | conjugal transfer protein TraR yfiA 84842 - 85315 + | hypothetical protein UTI89_P116 85395 - 85613 + | hypothetical protein TERM 166 86421 - 86394 - g 72 -7.6 -3.86202 | overlap 86395 GCCTATTATATGAAA GCGGCAGCGACA CAGT TTCCGCTGCCGG AGGGGATGAATCTGC TERM 167 86420 - 86395 - g 71 -11.1 -2.914 | overlap 86394 CCTATTATATGAAAG CGGCAGCGACA CAGT TTCCGCTGCCG GAGGGGATGAATCTG TERM 168 87155 - 87166 + G 70 -5.8 -4.18094 | CATCCTGAACAGCTT CCGT AAAA ACGG TTTTGAGCTGATTTC traC 85980 - 88610 + | conjugal transfer ATP-binding protein TraC trbI 88607 - 88993 + | conjugal transfer protein TrbI TERM 169 89554 - 89577 + G 70 -10.2 -3.15544 | CAGGTCCCGGCACGG GTGAGCGCCG TTCC CGGCGATCGC TTCCTGAAGGTGGAA traW 88990 - 89622 + | conjugal transfer pilus assembly protein TraW traU 89619 - 90611 + | conjugal transfer pilus assembly protein TraU TERM 170 90742 - 90760 + G 72 -4.6 -4.6313 | overlap 90744 ATTTCCTTTTGGTCT TGTAATGG TGC CCGTTATA TTATTTTATTTTGCA UTI89_P121 90635 - 90946 + | hypothetical protein trbC 90955 - 91593 + | conjugal transfer pilus assembly protein TrbC TERM 171 93118 - 93108 - g 75 -5.4 -4.67692 | overlap 93112 GCAAAATCAAACAAA CTGA CCG TCAG TGTCGGAGAGTTCTG traN 91590 - 93440 + | conjugal transfer mating pair stabilization protein TraN trbE 93464 - 93724 + | conjugal transfer protein TrbE TERM 172 94030 - 94020 - gf 90 -6.8 -5.03715 | ATGAGCGCCAAAAAA GCCA TGC TGGC GCATCCCGAACTGGA traF 93687 - 94460 + | conjugal pilus assembly protein TraF trbA 94474 - 94815 + | conjugal transfer protein TrbA artA 95131 - 94796 - | hypothetical protein traQ 95212 - 95496 + | conjugal transfer pilin chaperone TraQ TERM 173 95650 - 95638 - gf 75 -4.7 -4.74285 | opp_overlap 95638, overlap 95639 AGCCAGAACAGAAAA GCCGG CTC CCCGC TGGTTCCGCCTCAGC trbB 95483 - 96028 + | conjugal transfer protein TrbB trbJ 95958 - 96305 + | conjugal transfer protein TrbJ trbF 96253 - 96678 + | conjugal transfer protein TrbF traH 96656 - 98038 + | conjugal transfer pilus assembly protein TraH traG 98035 - 100857 + | conjugal transfer mating pair stabilization protein TraG traS 100873 - 101358 + | surface exclusion inner membrane protein TERM 174 101601 - 101583 - g 78 -5.3 -4.8048 | TCTGCAGATCAAAAA CACGTCT GATAA AGACATG AGTGGGCTGCAGGGC traT 101407 - 102138 + | conjugal transfer surface exclusion protein TraT TERM 175 102148 - 102170 + F 72 -9.8 -3.14931 | CTCTGAACCTCGTCA GGAGGCTGAT CTG ACCGGCCTCC TTGCTGACGCCTCGC TERM 176 102202 - 102241 + F 88 -12.2 -3.55761 | opp_overlap 102215 TTGCTCGTTGTCCAA CCCCGGGATGTAACAAAA TAAA TTTTGTCACCTCCCGGCG TTTCCGAAATAAATA yhfA 102296 - 103078 + | hypothetical protein traD 103129 - 105273 + | conjugal transfer protein TraD TERM 177 106821 - 106809 - gT 70 -4.1 -4.60487 | overlap 106810 GACCAGGGCGAAAAA CTCTC CCT GAAAG AGACGTTAACCCTGC TERM 178 107176 - 107131 - gT 81 -9.5 -4.14739 | overlap 107133 GCAGTGAGCTGAAAA CACAGGGCGTGCTCGGACACC CGGA GGTGACCATGACCGCCCTGTC ACCGGTCTGGCTGGA TERM 179 107174 - 107133 - gT 89 -12.1 -3.67188 | overlap 107131 AGTGAGCTGAAAACA CAGGGCGTGCTCGGACACC CGGA GGTGACCATGACCGCCCTG TCACCGGTCTGGCTG TERM 180 107179 - 107203 + GT 71 -8.6 -3.49102 | gap 1 TGACCGCCCTGTCAC CGG-TCTGGCT GGAC AGCCGGAGCCG TTATCTGCGGGATAT UTI89_P139 107875 - 107306 - | hypothetical protein TERM 181 107411 - 107401 - Gg 86 -6.8 -5.00616 | overlap 107402 TCCGGCCGGAAAAAA TGCC GGT GGCA GACGGCGAGCGACTG TERM 182 108386 - 108407 + GH 70 -7.3 -3.91897 | gap 1, overlap 108377 GCGCAGCGCCGGCGT GGATGCACAG ACG CTG-GCGTCC TTTCTGCATGACACG TERM 183 109779 - 109814 + GH 72 -6.8 -4.15044 | gap 1, overlap 109779 CGTGCCGTTCTCCGT CAG-GCAGGGCTGGC CGGGGGA GACAGCCCTGCACGG TTTATTGCACCGGGA TERM 184 110487 - 110462 - gH 100 -13.4 -4.07568 | GGTTGCCCGGGAAAA TCTGCTGCAG GAGCGT CTGCAGCAGA TGGAGCGGGATATGG traI 105273 - 110543 + | conjugal transfer nickase/helicase TraI TERM 185 110997 - 111011 + GF 77 -9.2 -3.85698 | opp_overlap 110980 GGCCATTCTTCTGAT GGCCCT GTG GGGGCC TTTGTCCGGCACCAG TERM 186 111245 - 111262 + GF 70 -9.1 -3.22951 | overlap 111232 111243 TACCCCGTTTCTGGC CCGGGGA TTTT TTCCCGG TATTCTACGCCTGTC traX 110506 - 111309 + | conjugal transfer pilus acetylation protein TraX UTI89_P141 111368 - 112228 + | hypothetical protein TERM 187 112520 - 112502 - g 88 -2.2 -5.58454 | opp_overlap 112505 112511 CTGACAGCAAAAAAA GCGCAGGC CAG ACAGGCGC TGTCCATTTATCTGA TERM 188 112702 - 112688 - g 95 -7 -5.24129 | overlap 112690 CTCTCGCATAAAAAA CTGCGC AGG GCGCTG AAGGCCATCACCCGT finO 112331 - 112891 + | conjugal transfer fertility inhibition protein FinO TERM 189 112918 - 112896 - f 100 -12.8 -5.66229 | ATGAACAATAAAAAA GCCTCCTTCA CAC TAAAGGAGGC GGAAAAATAAGGCTT TERM 190 112946 - 112926 - f 71 -4.7 -4.60889 | opp_overlap 112929 112942, overlap 112929 112942 AAGGAGGCGGAAAAA TAAGGCTTC TCT GAAACCTTC TTCCATACCCGGCAG TERM 191 112943 - 112929 - f 73 -6.4 -4.41633 | opp_overlap 112929 112942, overlap 112926 112942 GAGGCGGAAAAATAA GGCTTC TCT GAAACC TTCTTCCATACCCGG UTI89_P143 113020 - 113232 + | hypothetical protein TERM 192 113330 - 113346 + F 73 -2.9 -5.1615 | overlap 113331 AGTATGACCGGACAG TTCTGAG TAG CACAGAG TTTTTTCCATATTAA UTI89_P144 113465 - 113938 + | hypothetical protein hmo 113984 - 114193 + | putative regulator SEQUENCE gi|91209055|ref|NC_007946.1| Escherichia coli UTI89, complete genome (length 5065741) thrL 190 - 255 + | thr operon leader peptide TERM 1 280 - 301 + F 100 -13 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGACA GTGCGGGC TTTTTTTTCGACCAA TERM 2 301 - 280 - f 100 -13.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAC AGTGCGGGC TTTTTTTTCGACCAA TERM 3 654 - 642 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTGG TERM 4 2667 - 2654 - g 73 -3.7 -4.81249 | overlap 2655 GTTCAAAGTGAAAAA TGGCG AAAA CGCCC TGGCCTTCTATAGCC thrA 336 - 2798 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2800 - 3732 + | homoserine kinase TERM 5 4417 - 4453 + G 78 -12.4 -2.89793 | overlap 4414 TGCTACTACTTTGAA GCT-GTTGCGCAGCTGCC GCA GGAAGC-GCGCAACCAGC TGGTTGTCTCGGTGC thrC 3733 - 5019 + | threonine synthase TERM 6 5043 - 5069 + TF 91 -8 -5.24129 | gap 1, opp_overlap 5042 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA UTI89_C0006 5557 - 5309 - | hypothetical protein TERM 7 5468 - 5419 - Gg 72 -10 -3.31054 | overlap 5410 AAACAACATTATGAA TGGCGAGGCAATCGCTGGC-ACCC ATAT GGACCGCC-GCCATCGCCGCGCCA TAACAAGCACAATGA yaaX 5233 - 5529 + | hypothetical protein TERM 8 5563 - 5531 - GT 100 -13 -3.59087 | gap 1, opp_overlap 5537, overlap 5533 AACATCATCGCTAAA TA-TCAATGCCGGAT TACC ATCCGGCATTGACTA CAAACTTAACGCTGC TERM 9 5560 - 5533 - GT 100 -17.2 -3.36991 | opp_overlap 5537, overlap 5531 CATCATCGCTAAATA TCAATGCCGGAT TACC ATCCGGCATTGA CTACAAACTTAACGC TERM 10 5537 - 5556 + gT 81 -12.2 -3.06133 | opp_overlap 5533 5531 ATCGCTAAATATCAA TGCCGGAT TACC ATCCGGCA TTGACTACAAACTTA yaaA 6345 - 5569 - | hypothetical protein TERM 11 6117 - 6100 - G 73 -9.1 -3.5882 | opp_overlap 6109, overlap 6109 GACATCACCTTTAAA CGCCAGA ATTG CCTGGCG GGCATTCTCCGGTGT yaaJ 7845 - 6415 - | putative transporter YaaJ talB 8124 - 9077 + | transaldolase B TERM 12 9083 - 9114 + F 72 -9.4 -3.22102 | opp_overlap 9083, overlap 9081 9084 TCTGCTGTAATCATA CTTAGCGTGACCGG GAAG TCGGTCACGCTACC TCTTCTGAAACCTGT TERM 13 9084 - 9113 + F 84 -12.9 -2.5294 | opp_overlap 9083, overlap 9083 9081 CTGCTGTAATCATAC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAACCTG mogA 9189 - 9779 + | molybdenum cofactor biosynthesis protein TERM 14 9802 - 9785 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC AAGC GGGGGGA TCAGACTGATGACAA yaaH 10550 - 9984 - | hypothetical protein TERM 15 10434 - 10424 - G 75 -6.8 -4.36914 | TGCCGCCGTAGAAAA TGCC CAT GGCA AGAATAATACCGTCC yaaW 11412 - 10699 - | hypothetical protein TERM 16 10844 - 10804 - G 72 -11.2 -3.07994 | TTTAACCCCATTTAA TGCTGCGC-CCACAGGGCCT CCC AGACCC-GCGCCGCGCAGCA AACCATGCCCAAGCA TERM 17 11166 - 11200 + g 90 -14.4 -2.96274 | overlap 11160 ATTTACCGTGTCCGC GCAGTTTGTTGGCGAT ACT ATCGCCACCAAAATGC TGTAATTCTCCGGCA TERM 18 11298 - 11310 + g 80 -5.5 -4.93968 | overlap 11289 TCAGTACGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT yaaI 11842 - 11438 - | hypothetical protein UTI89_C0015 14208 - 12172 - | putative glutamate dehydrogenase dnaK 12214 - 14130 + | molecular chaperone DnaK TERM 19 14194 - 14155 - Gf 87 -13.6 -2.91467 | gap 1, opp_overlap 14156 AAACGGGTAATTATA CTGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAA TERM 20 14156 - 14193 + gF 100 -17.1 -3.25823 | gap 1, opp_overlap 14155 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 21 14300 - 14287 - g 71 -2.3 -4.98531 | GCGTGAAATCAAAAA GGCCT ACAA ACGCC TGGCCATGAAATACC dnaJ 14219 - 15349 + | chaperone protein DnaJ TERM 22 15378 - 15361 - T 100 -12.7 -4.09739 | CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CAGGGTAAAAACCAG TERM 23 15426 - 15447 + T 100 -13.7 -3.39449 | opp_overlap 15425 15426, overlap 15427 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 24 15447 - 15426 - T 77 -11.5 -2.74792 | opp_overlap 15426 15427, overlap 15425 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 25 15427 - 15446 + T 89 -15 -2.63348 | opp_overlap 15426 15425, overlap 15426 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG gef 15663 - 15454 - | gef membrane toxin TERM 26 15671 - 15703 + H 73 -4.9 -4.64844 | gap 1, opp_overlap 15639 TTCTGCATATAGGGG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC UTI89_C0019 16218 - 16979 + | hypothetical protein UTI89_C0020 16963 - 18492 + | hypothetical protein TERM 27 18541 - 18569 + F 100 -16.9 -4.21933 | TTAGGGCTATGCCCG CCTGATTCAGTGC TAC GCATTGAATCAGG TTCTTTTCGCGTTGA UTI89_C0021 18621 - 19880 + | hypothetical protein TERM 28 20721 - 20733 + G 72 -6.2 -4.30911 | AATCTGTGTGGTGTA CGCC GCACG GGCG TTTATATTCTGGTTG nhaA 20115 - 21281 + | pH-dependent sodium/proton antiporter TERM 29 21297 - 21316 + F 95 -10.7 -4.59414 | CAGGACGATGTACTG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 21347 - 22246 + | transcriptional activator NhaR TERM 30 22311 - 22298 - gT 100 -9.5 -5.72616 | opp_overlap 22298 ATGGATATAAAAAAA CCCGC CAGA GCGGG TTTTTTTACAAAGCT TERM 31 22298 - 22311 + GT 100 -9.5 -5.40474 | opp_overlap 22298 ATGGATATAAAAAAA CCCGC CAGA GCGGG TTTTTTTACAAAGCT rpsT 22605 - 22342 - | 30S ribosomal protein S20 UTI89_C0024 22258 - 22590 + | hypothetical protein yaaY 22708 - 22926 + | hypothetical protein TERM 32 23825 - 23813 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 22934 - 23875 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 33 24084 - 24066 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 34 25136 - 25113 - g 70 -5.2 -4.38712 | overlap 25114 TGCACGTTGAGAAAA TGCAACACAG CTAT CCGTGCTGCT GGCGTCATAAAACGC ileS 23918 - 26734 + | isoleucyl-tRNA synthetase TERM 35 26851 - 26817 - g 71 -9.2 -3.44848 | opp_overlap 26841, overlap 26815 TCTGGGCAGCAAATA CCTGATCCTCCAGAAC TTT GCTCTGGGGGATACGG TCCCGCTGTTCCCGT lspA 26734 - 27228 + | lipoprotein signal peptidase slpA 27336 - 27785 + | FKBX-type 16kD peptidyl-prolyl cis-trans isomerase (a rotamase) TERM 36 27925 - 27951 + G 70 -5.9 -4.15788 | gap 1 AACCGCTACGTGGTC GATAG-CCTGCG CGAG CGTGGGGCTATC TTTATTGAGCAGATT ispH 27787 - 28737 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 37 28766 - 28785 + F 100 -9.3 -5.24129 | opp_overlap 28766, overlap 28783 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 38 28785 - 28766 - f 82 -9.3 -4.15453 | opp_overlap 28766 28783 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA yaaF 28803 - 29717 + | ribonucleoside hydrolase RihC UTI89_C0033 29740 - 30105 + | hypothetical protein TERM 39 30114 - 30143 + F 78 -10.1 -3.70149 | opp_overlap 30113 GGCATAATGACAGAG GGTATGACGCA TCACTTTC TGCGTCATGCC TTTCACTGATATCCC dapB 30266 - 31087 + | dihydrodipicolinate reductase UTI89_C0035 31296 - 31099 - | hypothetical protein TERM 40 32469 - 32451 - g 71 -3 -4.84761 | overlap 32452 AGATGTTGAGAAAAA TGTGGTGA TGA TCACCGCC CAGAACCACGGTTTT carA 31516 - 32691 + | carbamoyl phosphate synthase small subunit TERM 41 33562 - 33532 - g 71 -9 -3.54424 | opp_overlap 33532 33533, overlap 33533 CGGTACTGCGTGAAA TCGGCGTTGAAACC GGT GGTTCCAACGTCCA GTTTGCGGTGAACCC TERM 42 35293 - 35274 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC AAAAGTGGCGGCGCG carB 32709 - 35930 + | carbamoyl phosphate synthase large subunit TERM 43 35984 - 36003 + F 100 -10 -5.60993 | opp_overlap 35984 35982 ATCGAATAACTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTGTGCACAG TERM 44 36041 - 36023 - f 100 -16 -4.52589 | TTTGTGCACAGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC UTI89_C0038 36103 - 36612 + | transposase UTI89_C0039 36867 - 36649 - | hypothetical protein TERM 45 36691 - 36715 + g 90 -9.9 -4.43877 | opp_overlap 36694, overlap 36693 36694 ATAGGCGCATTTGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGCCCATTA TERM 46 36693 - 36713 + g 91 -12.5 -3.81958 | opp_overlap 36694, overlap 36691 36694 AGGCGCATTTGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGCCCAT TERM 47 36694 - 36712 + g 100 -16 -2.88452 | opp_overlap 36694, overlap 36693 36691 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCA TERM 48 36712 - 36694 - G 100 -16 -4.62069 | opp_overlap 36694 36693 36691 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCA caiF 36902 - 37297 + | DNA-binding transcriptional activator CaiF TERM 49 37439 - 37461 + T 84 -8.4 -4.33165 | overlap 37454 TCGGCGTCACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTTCCTCCATTTGC caiE 38027 - 37416 - | carnitine operon protein CaiE caiD 38905 - 38012 - | carnitinyl-CoA dehydratase TERM 50 38503 - 38471 - G 85 -11.9 -3.60296 | opp_overlap 38462 38482, overlap 38450 38483 CAGCGCCAGTTCAAA GCCGCCGCCAAAGGC ATA GCCGTTCACAGCGGC GATGACCGGTTTGTC caiC 40474 - 38906 - | putative crotonobetaine/carnitine-CoA ligase TERM 51 39537 - 39518 - G 70 -10 -3.19003 | opp_overlap 39527 39530 ATAAGACGTCAGCAA GCGAACGC CGAA GCGTTCAC AAAACGCGTCTTTTT TERM 52 39527 - 39547 + g 78 -5.4 -4.87626 | opp_overlap 39518, overlap 39530 CAGCAAGCGAACGCC GAAGCGTT CACAA AACGCGTC TTTTTCCTGTTCCGA TERM 53 40363 - 40389 + g 75 -7.2 -4.38712 | ACCGGTTAACGACTC CGCCGCTGGATT CAC AAATCAGCGCCG TTTTATGACCGTAAA caiB 41749 - 40532 - | crotonobetainyl-CoA:carnitine CoA-transferase TERM 54 41781 - 41818 + r 83 -11.9 -3.21747 | opp_overlap 41771 41802, overlap 41784 41794 ATTTATGTAGCGCAT GACTGCCGGATGCGGCG TAAA CGCCTTATCCGGCCATC TTCGTGCTCCCGTAG TERM 55 41784 - 41815 + r 79 -12.2 -2.50016 | opp_overlap 41771 41802, overlap 41781 41794 TATGTAGCGCATGAC TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC ATCTTCGTGCTCCCG caiA 43019 - 41877 - | crotonobetainyl-CoA dehydrogenase TERM 56 42157 - 42173 + g 73 -3.6 -4.7497 | overlap 42158 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 44564 - 43050 - | L-carnitine/gamma-butyrobetaine antiporter TERM 57 44514 - 44542 + g 87 -4.5 -5.30339 | GACGATTATTAACGG CGGAAAGAAAACC TTC GGTTCTATTCCCG TTTTTCTCTTTTCAT TERM 58 44704 - 44719 + H 87 -6.2 -5.28942 | CAATAAGCTGCATTC TGTGAT TGTT ATCACA TTTTTGTTTCGGGTG TERM 59 44871 - 44907 + H 74 -9.7 -3.35695 | overlap 44865 TTTTGCTACGCCATG TTTTCAATATTGGTGAG GAG CTTAACAATATTGAAAG TTGGATTTATCTGCG fixA 45037 - 45807 + | putative electron transfer flavoprotein FixA fixB 45822 - 46763 + | putative electron transfer flavoprotein FixB fixC 46814 - 48100 + | putative oxidoreductase FixC fixX 48097 - 48384 + | putative ferredoxin TERM 60 48709 - 48745 + G 70 -7.3 -4.08706 | opp_overlap 48714, overlap 48711 48715 AATGTTCCTCATTGA TATCATCGCCATCGG CGTGATA TCGGTGGCGACGATG TTTGTCTCATCCCCC TERM 61 48900 - 48918 + G 91 -12.4 -3.76379 | overlap 48914 CCGCGATGTGGTATG TCGGCGCG ACC TGCGCCGA TTTGGTCGGCTATTG yaaU 48443 - 49774 + | metabolite transport protein YaaU yabF 49882 - 50412 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 62 50698 - 50713 + G 72 -4.6 -4.70453 | GATGGTGATTTGCGG CGGCCT GCTG GGGCTG TTTTGTATGTTACTT TERM 63 51384 - 51374 - g 75 -6.8 -4.42062 | opp_overlap 51373 51374 51376 CAGGTGCCAAATAAA CAGC GTC GCTG GTTTGCGGTGCTGTT kefC 50405 - 52267 + | glutathione-regulated potassium-efflux system protein KefC folA 52324 - 52938 + | dihydrofolate reductase TERM 64 53135 - 53109 - g 83 -12.3 -3.36694 | overlap 53107 ATGCAGGCTTAAATA TGAGCGCCACC CTTAC GGTTGCGCTCA ATGCTGAACTTAAAA UTI89_C0055 53024 - 53257 + | putative antitoxin of gyrase inhibiting toxin-antitoxin system TERM 65 53284 - 53301 + T 81 -9.8 -3.95772 | overlap 53291 ACGGTATACCGCAGT CGCGGC AGGAAC GCCGCG TTTCCCTTTGTTATT TERM 66 53524 - 53491 - T 76 -10.9 -3.05715 | AACTGTTCCAGTTAA CGCGCTGGGAACGAA ATTT TGCGATGCCAGCGCG CACCGAACGTTGATT apaH 54420 - 53572 - | diadenosine tetraphosphatase apaG 54804 - 54427 - | ApaG TERM 67 54515 - 54536 + g 72 -8.7 -3.71527 | gap 1, overlap 54528 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 68 54606 - 54588 - G 76 -11 -3.30124 | opp_overlap 54574 54588 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 55628 - 54807 - | dimethyladenosine transferase pdxA 56614 - 55625 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 69 56480 - 56463 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG TERM 70 56524 - 56512 - G 74 -7.7 -4.07133 | CATCGGCACAAACAA CCAGT TCG ACTGG CCACTCACGCTGTGC surA 57900 - 56614 - | peptidyl-prolyl cis-trans isomerase SurA imp 60307 - 57953 - | organic solvent tolerance protein TERM 71 59805 - 59828 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 59795 59805, overlap 59795 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCGCCACGTTGT TERM 72 60697 - 60683 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 73 60700 - 60720 + G 74 -3.1 -5.00884 | opp_overlap 60702, overlap 60708 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 60562 - 61377 + | DNA-J like membrane chaperone protein TERM 74 61452 - 61401 - T 83 -11.4 -3.30124 | GTGTAGGCCTGATAA GACGCGGTAGGCCGGATAAGACGC GCCA GCGTCGCATCCGGCGAGCAGCATC AGACAATCGGCGCAA rluA 62186 - 61527 - | 23S rRNA/tRNA pseudouridine synthase A TERM 75 61919 - 61955 + g 72 -8.6 -3.72576 | gap 1, overlap 61921 GCTTTTTCGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC TERM 76 62146 - 62122 - G 80 -11.5 -3.29273 | overlap 62120 62144 TTGACCACCATAATA TGGTCATCCTG ATA CAGGACAACCA GCCAGGGGTCCTGCG hepA 65104 - 62198 - | ATP-dependent helicase HepA TERM 77 62247 - 62259 + g 76 -9.1 -3.77219 | TCCAGACGCCAGCCT GCCTG ATC CAGGC TTTCCATTACCTGCT polB 67619 - 65268 - | DNA polymerase II TERM 78 65334 - 65323 - G 77 -5.8 -4.64676 | overlap 65324 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 79 67429 - 67380 - G 71 -10.7 -2.89602 | gap 1, overlap 67379 67388 GGCGCGACAGTAAAG GCCATACACCGGCTGGCGGTGAAA ATC TTTTAACGCCAGC-GGCGTCAGGC GAAAGCCTTGTTCAC TERM 80 67640 - 67660 + r 78 -8.3 -4.14598 | opp_overlap 67640 AAATCCAATAAAAAA CCAGGCT TGATTAT AGCCTGG TTTCGTTTGATTGGC TERM 81 67660 - 67640 - R 100 -8.3 -5.52096 | opp_overlap 67640 AAATCCAATAAAAAA CCAGGCT TGATTAT AGCCTGG TTTCGTTTGATTGGC araD 68389 - 67694 - | L-ribulose-5-phosphate 4-epimerase TERM 82 68472 - 68498 + r 73 -10.1 -2.99325 | opp_overlap 68462 68461, overlap 68471 AAGACGCGTCGGCGT CGCATCAGGCG GTGAA TGCCGGATGCG CTTTGCTTATCCGGC TERM 83 68557 - 68583 + r 73 -10.1 -2.99325 | opp_overlap 68544, overlap 68556 AAGACGCGCCAGCGC CGCATCAGGCG GTGAA TGCCGGATGCG CTTTGCTTATCCGGC TERM 84 68619 - 68652 + r 71 -9.5 -3.08464 | opp_overlap 68606 68629 68631 68632, overlap 68640 AATCCGGAACGCGTA GGCCTGATAAGACGC GTCA GCGTCGCATCAGGCG TTACATACCTGATGC TERM 85 68640 - 68670 + r 82 -12.6 -2.70932 | opp_overlap 68629 68632 68606 68631, overlap 68619 ATAAGACGCGTCAGC GTCGCATCAGGCGT TAC ATACCTGATGCGGC TACTTAGCGACGAAA araA 70176 - 68674 - | L-arabinose isomerase araB 71887 - 70187 - | ribulokinase TERM 86 70502 - 70526 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTGACGGCGATC TERM 87 71996 - 71982 - H 83 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGC ATAGCA AAGTGTGACGCCGTG araC 72175 - 73071 + | DNA-binding transcriptional regulator AraC TERM 88 73075 - 73103 + F 100 -13.9 -3.28261 | opp_overlap 73075 73079 73082, overlap 73079 73083 GGTTGTGAATAATAA GAAAGAAGGGGGG GAA CCCCCTTGCTTTC TTCATCTGACGTTAT TERM 89 73103 - 73075 - f 100 -12.6 -3.9461 | gap 1, opp_overlap 73075 73079 73083, overlap 73079 73082 GGTTGTGAATAATAA GAAAG-AAGGGGG GGAA CCCCCTTGCTTTC TTCATCTGACGTTAT TERM 90 73098 - 73079 - f 82 -7.8 -4.57882 | opp_overlap 73075 73079 73083, overlap 73075 73082 GTGAATAATAAGAAA GAAGGGGG GGAA CCCCCTTG CTTTCTTCATCTGAC TERM 91 73079 - 73099 + F 82 -8.9 -4.29106 | opp_overlap 73079 73075 73082, overlap 73075 73083 GTGAATAATAAGAAA GAAGGGGGG GAA CCCCCTTGC TTTCTTCATCTGACG TERM 92 73095 - 73082 - f 86 -9.5 -4.37348 | opp_overlap 73079 73075 73083, overlap 73079 73075 AATAATAAGAAAGAA GGGGG GGAA CCCCC TTGCTTTCTTCATCT TERM 93 73083 - 73095 + F 80 -10.5 -3.71527 | opp_overlap 73082 73079 73075, overlap 73079 73075 ATAATAAGAAAGAAG GGGGG GAA CCCCC TTGCTTTCTTCATCT UTI89_C0070 73336 - 73458 + | hypothetical protein UTI89_C0071 73583 - 74194 + | hypothetical protein UTI89_C0072 74440 - 74862 + | hypothetical protein TERM 94 75464 - 75475 + G 70 -4.4 -4.45544 | ATTATCGGCTGCTTG CTGT GGCC ACAG TTTTACTTCCTGCCG TERM 95 75555 - 75574 + G 76 -4.2 -4.91712 | opp_overlap 75552, overlap 75557 GTGAGTTTAAATGGT TGCTGCTG GCAA CAGCGGTG TTTTTGTGGGTTGGA TERM 96 75557 - 75572 + G 70 -6.8 -4.07789 | opp_overlap 75552, overlap 75555 GAGTTTAAATGGTTG CTGCTG GCAA CAGCGG TGTTTTTGTGGGTTG yabI 75017 - 75781 + | putative integral membrane protein YabI thiQ 76614 - 75895 - | thiamine transporter ATP-binding subunit thiP 78187 - 76577 - | thiamine transporter membrane protein TERM 97 76667 - 76655 - GR 78 -10.5 -3.48036 | CAGCAGCAGAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA TERM 98 77680 - 77643 - GR 82 -3.3 -5.22943 | gap 1, opp_overlap 77644 77668, overlap 77644 ACGAAACGGAAAAAA TGCCAGCCGTGCATCCCA AGT TGGGCGGCA-AGCTGACG TTGTTCGCCGGGAAT tbpA 79146 - 78163 - | thiamine transporter substrate binding subunit TERM 99 79010 - 79020 + g 77 -3.2 -5.08824 | TCGCAATTACAGTCT GCTT CAA AGGC TTTTTTGACTACCGG yabN 80986 - 79310 - | transcriptional regulator SgrR TERM 100 80436 - 80424 - G 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGATATTTGCTGCC TERM 101 81230 - 81252 + r 100 -10.6 -5.93252 | GGTGTTAATCGCCAC GCCAGCAG TGATTAT CTGCTGGC TTTTTTCTTTTTGGC leuD 81898 - 81293 - | isopropylmalate isomerase small subunit TERM 102 81729 - 81739 + g 72 -4.6 -4.72272 | ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCCAGAAA leuC 83309 - 81909 - | isopropylmalate isomerase large subunit TERM 103 82039 - 82068 + g 70 -9.9 -3.14132 | overlap 82042 TTGCTGGTGGAGGCG CAACGTTCGCCCG GATT CAGGCGGTCGTTG TTCATCGCCAGGCAC TERM 104 82717 - 82738 + g 74 -7.9 -4.12902 | AATTCCACCACATGC CCGGTACCG CCTG CGCTGCCGG TTTTACCAATAATTG TERM 105 82828 - 82840 + g 76 -9.1 -3.75629 | ATGGTCTTCGCCCGG CCCTG TTT CAGGG TTTGCGTTGCCAGTA leuB 84406 - 83312 - | 3-isopropylmalate dehydrogenase leuA 85974 - 84403 - | 2-isopropylmalate synthase TERM 106 85108 - 85119 + g 72 -5.8 -4.41616 | TGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 107 86019 - 86048 + r 100 -15.1 -3.67296 | opp_overlap 86025, overlap 86025 CTCGCTTCGGGCATA AAAAAACCCGCGC AATG GCGCGGGTTTTTG TTTGACTGCGTGCTG TERM 108 86042 - 86025 - R 100 -14.1 -5.60993 | opp_overlap 86019 86025 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTGTTTGACTGC TERM 109 86025 - 86042 + r 100 -14.1 -5.30616 | opp_overlap 86025, overlap 86019 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTGTTTGACTGC leuL 86152 - 86066 - | leu operon leader peptide UTI89_C0083 86611 - 86733 + | hypothetical protein TERM 110 87110 - 87120 + G 70 -6.8 -4.07568 | GTACAAAATGAATTG CCTG GTT CAGG TTTTGAACCCGCGAG leuO 86810 - 87754 + | leucine transcriptional activator TERM 111 87799 - 87760 - f 72 -9.4 -3.1996 | opp_overlap 87760 87793 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TCAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 112 87760 - 87799 + F 100 -16 -5.49234 | opp_overlap 87760, overlap 87793 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TCAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 113 87918 - 87934 + F 73 -5.1 -4.68612 | TTATTATCAATTTCA TCCTCTG TAA TGGAGGA TTTTATCGTTTCTTT TERM 114 88031 - 88043 + F 83 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCGTCAAAC TERM 115 89385 - 89375 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 88072 - 89796 + | acetolactate synthase 3 catalytic subunit ilvH 89799 - 90290 + | acetolactate synthase 3 regulatory subunit TERM 116 90316 - 90336 + GF 100 -9.7 -5.41143 | AATGCGCAATTTGCA GCCCAACAT GTC ACGTTGGGC TTTTTTTGCGAAATC fruL 90293 - 90388 + | FruR leader peptide TERM 117 90382 - 90372 - gf 72 -4.6 -4.65747 | GAACCTGGAATAAAA GCAG TTG CCGC AGTTAATTTTCTGCG TERM 118 90420 - 90442 + GF 71 -2.8 -4.87318 | gap 1 GTTAATGAATTTAAT CCATA-CCA GTACAA TGGCTATGG TTTTTACATTTTACG UTI89_C0088 90342 - 90473 + | hypothetical protein fruR 90470 - 91474 + | DNA-binding transcriptional regulator FruR TERM 119 91521 - 91488 - f 74 -5.9 -4.64334 | gap 1, opp_overlap 91491, overlap 91475 91489 91491 AAGCCGCGAACAAAA GTACGCGCCAG-GTGA ATT TCTCTCTGGCGCGTTG AGTACGGGAATGGAC TERM 120 91520 - 91489 - f 74 -9.4 -3.37877 | gap 1, opp_overlap 91491, overlap 91475 91488 91491 AGCCGCGAACAAAAG TACGCGCCAG-GTGA ATT TCTCTCTGGCGCGTT GAGTACGGGAATGGA TERM 121 91518 - 91491 - f 83 -12 -3.25538 | gap 1, opp_overlap 91491, overlap 91475 91489 91488 CCGCGAACAAAAGTA CGCGCCAG-GTGA ATT TCTCTCTGGCGCG TTGAGTACGGGAATG TERM 122 91491 - 91518 + F 81 -12 -3.05596 | gap 1, opp_overlap 91475 91491 91489 91488 CCGCGAACAAAAGTA CGCGCCAG-GTGA ATT TCTCTCTGGCGCG TTGAGTACGGGAATG TERM 123 91571 - 91588 + F 72 -7.1 -4.07568 | ATAAGACTATTCCTG GCATTTA TTGA TAAATGC TTTTAAACCCGCCCG mraZ 92040 - 92534 + | cell division protein MraZ TERM 124 92775 - 92803 + G 76 -12.4 -2.52623 | overlap 92774 CCACGGACCTTTCTC CGCGCTGGGCGA ATACG TTGCCGAGCGCG ATCTTATCGGCAAGA TERM 125 92869 - 92880 + G 70 -3.6 -4.61873 | CCGCAACTTGATGAT GCTG AGCG CGGC TTTTCCTTTATGCGC mraW 92536 - 93477 + | S-adenosyl-methyltransferase MraW TERM 126 93534 - 93552 + G 72 -10.2 -3.35996 | overlap 93551 ATGGGAAGCCACGAG CGCCATGC CTT GCCTGGCG TTATCGGTGACGATC TERM 127 93798 - 93785 - g 76 -8.1 -4.20932 | opp_overlap 93784 93782 AATAGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 93474 - 93839 + | cell division protein FtsL TERM 128 93902 - 93922 + G 78 -7.6 -4.37734 | opp_overlap 93902 93900 93903, overlap 93903 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 129 95421 - 95442 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 95390, overlap 95424 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 130 95424 - 95439 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 95390, overlap 95421 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 131 95480 - 95498 + G 73 -11.6 -2.67171 | opp_overlap 95477 95474, overlap 95477 95479 95478 95494 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 93855 - 95621 + | peptidoglycan synthetase FtsI precursor TERM 132 96719 - 96709 - g 81 -6.8 -4.62783 | overlap 96710 GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGCCTGCACTG murE 95608 - 97095 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 133 97523 - 97502 - g 77 -10.1 -3.6849 | opp_overlap 97501 AGGCAATCTCAATAA CGACATCGG TGTA CCGATGACG CTGTTGCGCTTAACG TERM 134 98290 - 98272 - g 70 -5.2 -4.41348 | opp_overlap 98286, overlap 98276 GTGTGGGTAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 97092 - 98450 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 135 99037 - 99059 + G 74 -9.9 -3.5241 | gap 1, opp_overlap 99019, overlap 99035 GACCGATGGTCTCGA CGGTCTGGCA ATTA TGCC-GACCG TATTTGTCGCCGGTG mraY 98444 - 99526 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 136 99566 - 99583 + G 70 -6.2 -4.20783 | ATGTCGTCATTATCG GCCTGG GCCTCA CCGGGC TTTCTTGCGTGGACT TERM 137 99608 - 99628 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA TERM 138 100156 - 100143 - g 72 -6.7 -4.2828 | opp_overlap 100143, overlap 100127 GCGCATTTACGAAAA CGCAA AAGT TTGCG TGGTTAATGCTGATG murD 99529 - 100845 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 100842 - 102089 + | cell division protein FtsW TERM 139 102594 - 102609 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 102086 - 103153 + | N-acetylglucosaminyl transferase murC 103207 - 104682 + | UDP-N-acetylmuramate--L-alanine ligase ddl 104675 - 105595 + | D-alanine--D-alanine ligase ftsQ 105597 - 106427 + | cell division protein FtsQ ftsA 106424 - 107686 + | cell division protein FtsA ftsZ 107747 - 108898 + | cell division protein FtsZ TERM 140 109443 - 109453 + G 74 -3.2 -5.01546 | TGGGCTGAATTTAAG CCGT ACA ATGG TTTTTCTCTGGATTT TERM 141 109843 - 109833 - g 70 -6.8 -4.07568 | GCTGTCCTTGCAAAA CAGG AAG CCTG GGAATATGTGACCTT lpxC 108999 - 109916 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 142 109943 - 109986 + F 100 -4.5 -6.17292 | opp_overlap 109943 109955 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT secM 110147 - 110659 + | SecA regulator SecM TERM 143 112496 - 112509 + G 75 -4.5 -4.8622 | opp_overlap 112496 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC secA 110721 - 113426 + | preprotein translocase subunit SecA TERM 144 113465 - 113448 - f 100 -12.7 -4.42639 | opp_overlap 113448 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 145 113448 - 113465 + F 100 -12.7 -5.33866 | opp_overlap 113448 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 146 113713 - 113696 - g 70 -4.1 -4.62069 | overlap 113698 TCGCTATTTGAAAAA CTGGAAT ATGA ATTCCCG GACAGGCATATAACT mutT 113486 - 113884 + | nucleoside triphosphate pyrophosphohydrolase TERM 147 113966 - 113917 - T 100 -19.4 -2.63301 | opp_overlap 113924 113925, overlap 113886 GACATTTGCATATGA TGCCTGATGCGACGCTGGCGCG TTTTAT CAGGCCAGCGTCGCATCAGATA GAATGTCACTGCTTT yacG 114169 - 113972 - | zinc-binding protein yacF 114922 - 114179 - | hypothetical protein TERM 148 114534 - 114524 - G 70 -6.8 -4.08485 | TGTAGGTAAATCAAA GCTG CAA CAGC CGCCCGGGATGCTCA TERM 149 114604 - 114634 + g 91 -11.1 -4.21462 | GAAATTGCCCGATAC GCGGCGCGGAG ATTAATACG CTCCCCGCCGC TTTTAACTGCTGAAT coaE 115542 - 114922 - | dephospho-CoA kinase TERM 150 115246 - 115297 + g 74 -2.3 -5.0916 | gap 2, opp_overlap 115272 AGTAGCTTGCTGGAT CTGGTGTTGCGTCTCTTGCTGAATC AGCG GATGCAGCA-GGG-CGTTAAGCCAG TTTTTCTCTTCCGGG TERM 151 115515 - 115480 - G 76 -9 -3.81951 | overlap 115481 TCCGAGATTAGCAAA CGCATTGGCAACGGTA CTCT TGCCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 152 115514 - 115481 - G 78 -12.5 -2.88849 | overlap 115480 CCGAGATTAGCAAAC GCATTGGCAACGGTA CTCT TGCCACTGCCAATGC CTCCCGTTAAGGCAA guaC 115767 - 116810 + | guanosine 5'-monophosphate oxidoreductase TERM 153 116844 - 116819 - T 100 -16.2 -3.37493 | opp_overlap 116819, overlap 116804 CCTGTAATATACCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATTCCACT TERM 154 116819 - 116844 + T 100 -16.2 -3.36671 | opp_overlap 116819 116804 CCTGTAATATACCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATTCCACT hofC 118047 - 116845 - | type IV pilin biogenesis protein hofB 119422 - 118037 - | hypothetical protein TERM 155 118102 - 118115 + g 74 -8.1 -4.08064 | TTAAGCCTTGCTCCA CGGCT AGGC AGCCG TTTTCAAAAAGCGTT TERM 156 118131 - 118155 + g 71 -9.2 -3.55622 | TTTTCAAAAAGCGTT CGCATACCCG CCTGT CGGGCGTGCG TTTCCAGCGATTCAA ppdD 119872 - 119432 - | putative major pilin subunit TERM 157 119825 - 119812 - G 70 -6.7 -4.08692 | CAATGGCGCTTAAAA TGGCA ATGA TGCCA ATAACCACCATCAGT TERM 158 120035 - 120066 + G 83 -13.2 -3.06261 | gap 1, overlap 120037 AGTTGGGGAAGGGGA GATTTATCCGC-CCG CGA TGGAGCGGATAAATC TGTTAGCAATTAGCG UTI89_C0116 119890 - 120063 + | hypothetical protein nadC 120969 - 120076 - | quinolinate phosphoribosyltransferase TERM 159 120341 - 120363 + g 82 -7.6 -4.57073 | TCGACTTCTACTGGC GCATCCGGGT GCA ACCAGGACGC TTTTTCGACCGCCTG ampD 121057 - 121608 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 121605 - 122459 + | regulatory protein AmpE TERM 160 122494 - 122466 - T 72 -10.2 -2.84325 | overlap 122463 TTGGTGTAAAGATTA TTGCCCTCACCC TGCAC GGGTGAGGGCGT AGAGAGATTAATGCG aroP 123872 - 122502 - | aromatic amino acid transporter TERM 161 124537 - 124562 + G 77 -11.9 -3.25823 | opp_overlap 124537 CTTTGCACTCACCAA CGCCATTACCA GTAC TGGTAAAGGCG TTAATCTACAGGGGC TERM 162 124562 - 124537 - g 77 -11.9 -3.18264 | opp_overlap 124537 CTTTGCACTCACCAA CGCCATTACCA GTAC TGGTAAAGGCG TTAATCTACAGGGGC TERM 163 125465 - 125449 - g 70 -6.5 -4.2558 | overlap 125450 TACGCCGTATGAAAA CGTCCGC GTG GCGAACA TGCAGTGGAACGAGC TERM 164 125574 - 125551 - g 81 -9.6 -4.09685 | overlap 125552 CTGGACGCCGGAAAA TCCGGAACAT GGGT ATGTTCCGGG CCATACCGGTAACGA TERM 165 125573 - 125552 - g 83 -13.1 -3.05597 | overlap 125551 TGGACGCCGGAAAAT CCGGAACAT GGGT ATGTTCCGG GCCATACCGGTAACG usp 124400 - 126181 + | uropathogenic specific protein TERM 166 126287 - 126271 - g 70 -5.2 -4.32903 | ATGAAAGATGGAAAA TCCTTA AAAGG TAAGGA GCTAGAAATGTACTG UTI89_C0122 126184 - 126468 + | hypothetical protein TERM 167 126523 - 126495 - f 70 -9 -3.18086 | opp_overlap 126495 126497, overlap 126497 AAACTATATATGGAA CATCATCGCATC TGGCT AATGCGATGATA TTAATGACATAAAAT TERM 168 126521 - 126497 - f 72 -9.4 -3.14393 | opp_overlap 126497 126495, overlap 126495 ACTATATATGGAACA TCATCGCATC TGGCT AATGCGATGA TATTAATGACATAAA UTI89_C0123 126876 - 127166 + | hypothetical protein TERM 169 127193 - 127221 + F 72 -9.7 -3.16683 | opp_overlap 127186 127193 AAACTATATATGGAA CATCATCGCGT CTGGCTA ATGCGATGATG TTAATAACATAAAAT TERM 170 127680 - 127668 - g 78 -7.7 -4.37506 | ACTAGCAAAGATAAA TCCCT AAA AGGGA AAAAATTAGAAAAAT UTI89_C0124 127575 - 127865 + | hypothetical protein pdhR 128321 - 129085 + | transcriptional regulator PdhR UTI89_C0126 129264 - 129082 - | hypothetical protein TERM 171 129209 - 129155 - Gf 70 -7.3 -3.90291 | gap 1, opp_overlap 129176, overlap 129156 129159 129162 AGCGCGGCAACTAAA CGTAGAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTCCA-G AAAACTCAACGTTAT TERM 172 129206 - 129159 - Gf 77 -11.4 -2.70979 | opp_overlap 129176, overlap 129155 129156 129162 CGGCAACTAAACGTA GAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 173 129465 - 129453 - gH 79 -9.1 -3.9461 | opp_overlap 129452 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG aceE 129246 - 131909 + | pyruvate dehydrogenase subunit E1 TERM 174 132237 - 132206 - g 75 -11.4 -3.12788 | overlap 132200 132203 132204 GAGAAGAAAGAAGCA GCTCCGGCAGCAGC ACCA GCGGCTGCCGCGGC AAAAGACGTTAACGT aceF 131924 - 133816 + | dihydrolipoamide acetyltransferase TERM 175 133844 - 133823 - f 93 -11.5 -4.43477 | opp_overlap 133825, overlap 133825 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 176 133825 - 133842 + F 100 -14.1 -5.32882 | opp_overlap 133823 133825 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 177 133842 - 133825 - f 100 -14.1 -3.82321 | opp_overlap 133825, overlap 133823 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 178 134888 - 134860 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGTT lpdA 134024 - 135448 + | dihydrolipoamide dehydrogenase TERM 179 135478 - 135506 + T 71 -8.1 -3.7282 | opp_overlap 135481 135484 GAACATCCTGCAAAT TAAGAAGCGGCTA TTC TGGCCGCTTCAGA TTGTTGATAAAGTGC TERM 180 135503 - 135481 - T 88 -12 -3.51708 | opp_overlap 135478, overlap 135484 CATCCTGCAAATTAA GAAGCGGCTA TTC TGGCCGCTTC AGATTGTTGATAAAG TERM 181 135500 - 135484 - T 72 -7.9 -3.89354 | opp_overlap 135478, overlap 135481 CCTGCAAATTAAGAA GCGGCTA TTC TGGCCGC TTCAGATTGTTGATA TERM 182 135656 - 135672 + T 83 -6.5 -5.03314 | TGTCATCAGTCTTAA GCGGC TAACAAC GCCGC TTTTTTACGCCTGCA yacH 137447 - 135690 - | hypothetical protein TERM 183 135842 - 135827 - G 70 -4.7 -4.56597 | CTTTCTCTCGAAAAA CCTGA CGCTGC TCAGG CGAGGCAGACTGGAT TERM 184 137577 - 137565 - H 72 -7.7 -3.86346 | GGATTCGTTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 185 137920 - 137909 - g 77 -7.2 -4.57837 | overlap 137910 137911 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT TERM 186 140000 - 139986 - g 72 -7.8 -3.87815 | CTGGATGCGCACAAA GGTCAG TTG CCGACC CGCCTGTGGGTGGCA acnB 137802 - 140399 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 187 140435 - 140460 + F 100 -12.7 -5.72622 | gap 1, opp_overlap 140427 140435 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA TERM 188 140460 - 140435 - f 95 -12.7 -3.66897 | gap 1, opp_overlap 140435, overlap 140427 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA yacL 140574 - 140936 + | hypothetical protein TERM 189 140969 - 140942 - T 100 -17.1 -4.02535 | GCAGAAGTAAGTAAA TCAGGCGGAGC CTCCGT GCTCCGCCTGA GACGTTAAACAGCGG speD 141768 - 140974 - | S-adenosylmethionine decarboxylase speE 142650 - 141784 - | spermidine synthase TERM 190 142732 - 142707 - RH 74 -10.5 -3.24255 | opp_overlap 142707 142709, overlap 142700 142709 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 191 142709 - 142730 + rH 71 -8.7 -3.51934 | opp_overlap 142707 142700 142709, overlap 142707 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG TERM 192 142730 - 142709 - RH 78 -10.9 -3.17362 | opp_overlap 142709 142707, overlap 142707 142700 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 143274 - 142756 - | hypothetical protein TERM 193 143223 - 143233 + gH 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 194 144654 - 144642 - gR 70 -5.5 -4.3739 | overlap 144649 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGACGCATCGTGCA cueO 143269 - 144819 + | multicopper oxidase TERM 195 144861 - 144838 - TR 83 -11 -3.57462 | opp_overlap 144840, overlap 144840 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTACTTCACAT TERM 196 144859 - 144840 - TR 100 -13.6 -3.36515 | opp_overlap 144840, overlap 144838 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC TERM 197 144840 - 144859 + Tr 100 -13.6 -3.56727 | opp_overlap 144840 144838 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC gcd 147274 - 144866 - | glucose dehydrogenase hpt 147423 - 147998 + | hypoxanthine phosphoribosyltransferase yadF 148701 - 148039 - | carbonic anhydrase TERM 198 149324 - 149340 + G 70 -3.5 -4.60924 | TGGATATTGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA yadG 148810 - 149736 + | hypothetical protein yadH 149733 - 150503 + | hypothetical protein TERM 199 150510 - 150539 + F 80 -9.3 -4.10657 | overlap 150511 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT TGGGGGAGAGGAG TTTTGACGGCTATCA TERM 200 150511 - 150538 + F 76 -10.6 -3.06073 | overlap 150510 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT TGGGGGAGAGGA GTTTTGACGGCTATC yadI 150608 - 151048 + | putative PTS system IIA component YadI yadE 151112 - 152341 + | hypothetical protein panD 152725 - 152345 - | aspartate alpha-decarboxylase TERM 201 152424 - 152408 - Gf 77 -9.4 -3.63744 | opp_overlap 152392 152418, overlap 152406 GTCGCCTTCAAAATA GGCGAC GTTGG GTCGCC AGGTGCGAGCTTCTT TERM 202 152772 - 152758 - gH 83 -11.4 -3.33696 | opp_overlap 152758 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 203 152758 - 152772 + GH 85 -11.4 -3.56099 | opp_overlap 152758 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC UTI89_C0145 152693 - 152878 + | hypothetical protein TERM 204 153018 - 153034 + G 88 -12.3 -3.61889 | opp_overlap 153020 ATGCACCGAGTACCA CACCGCA TGA TGCGGTG TTTAAACAATTTTTA yadD 152999 - 153883 + | hypothetical protein TERM 205 153960 - 153930 - T 85 -12 -3.3482 | overlap 153933 TAACGTGGCAATGAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AGCATTACGCCAGTT TERM 206 153957 - 153933 - T 77 -9.3 -3.81146 | overlap 153930 CGTGGCAATGAATAA CTGGCGCCA TCAGCCG TAGCGCCAG TTAAGCATTACGCCA panC 154816 - 153965 - | pantoate--beta-alanine ligase panB 155622 - 154828 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 207 155694 - 155730 + r 95 -13 -3.30243 | opp_overlap 155689, overlap 155696 155697 155699 GGGGCAATGATTTAT CCGTATCGCACCGCCG TTGTC TGGCGGTGCGATAGTG TTATCAGGGGTAGGT TERM 208 155696 - 155728 + r 95 -14.2 -3.21924 | opp_overlap 155689, overlap 155694 155697 155699 GGCAATGATTTATCC GTATCGCACCGCCG TTGTC TGGCGGTGCGATAG TGTTATCAGGGGTAG TERM 209 155697 - 155727 + r 100 -17.7 -2.5294 | opp_overlap 155689, overlap 155696 155694 155699 GCAATGATTTATCCG TATCGCACCGCCG TTGTC TGGCGGTGCGATA GTGTTATCAGGGGTA TERM 210 155699 - 155725 + r 100 -15.9 -2.80074 | opp_overlap 155689, overlap 155697 155696 155694 AATGATTTATCCGTA TCGCACCGCCG TTGTC TGGCGGTGCGA TAGTGTTATCAGGGG yadC 157023 - 155734 - | putative fimbrial-like adhesin protein TERM 211 155943 - 155953 + g 83 -5.4 -5.055 | TCAGTACCATTTGTG CACT TTT AGTG TTTTTTAAACCTTCA TERM 212 156984 - 156998 + g 85 -7.2 -4.77759 | opp_overlap 156983 AAAAAAGAAAGTATC TGAAGA ATA TCTTCA TTTTTACTCCATTGT TERM 213 157015 - 157040 + g 76 -7.6 -4.28067 | opp_overlap 157029, overlap 157010 157016 TTTTACTCCATTGTC ATGCTGCAAG ATAATG CTTGCAGCAC TTTGTCTGTTATTCG TERM 214 157016 - 157039 + g 74 -11.1 -3.15756 | opp_overlap 157029, overlap 157010 157015 TTTACTCCATTGTCA TGCTGCAAG ATAATG CTTGCAGCA CTTTGTCTGTTATTC yadK 157645 - 157049 - | putative fimbrial subunit YadK precursor TERM 215 157510 - 157523 + g 71 -3.1 -4.8277 | CGTTGTTGCTGATTC CACTT TGGC AGGTG TTATTTTTTATATTT yadL 158286 - 157672 - | putative fimbrial subunit YadL precursor yadM 158858 - 158292 - | putative fimbrial subunit YadM precursor TERM 216 158808 - 158833 + g 77 -6.3 -4.5954 | opp_overlap 158796 158811 AAATACCGAAGGCGA TAACAATAGTC CCAT GAGTATTGTTA TTTTATGTGGTGTGA htrE 161463 - 158875 - | putative outer membrane usher protein TERM 217 159965 - 159990 + g 81 -10.5 -3.60296 | ACCGTGACCTGATTT TTCATGCGCGA GTAA TTGCGCATGGA TTTAGGCTCAAGATC TERM 218 160223 - 160211 - G 79 -4.7 -4.99638 | opp_overlap 160210 160213, overlap 160212 160213 ACATCGACAGAAAAA GCCCC CAC GGGGG TATTCATACCAAGCC ecpD 162238 - 161498 - | putative chaperone protein EcpD TERM 219 161564 - 161553 - G 81 -4.4 -5.055 | TTAATGGCGAAAAAA TGCA CTTT TGCA GAGCTTGTTCTGCCA yadN 162961 - 162347 - | putative fimbrial subunit YadN precursor folK 163778 - 163299 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 165193 - 163775 - | poly(A) polymerase I yadB 166128 - 165232 - | glutamyl-Q tRNA(Asp) synthetase TERM 220 165520 - 165510 - G 81 -6.8 -4.65895 | opp_overlap 165512, overlap 165511 165512 CTTTCCAGCCAAAAA GCTG GTA CAGC GAGATTTGCCGCACC TERM 221 166169 - 166145 - R 87 -5.6 -5.4505 | opp_overlap 166148, overlap 166148 TCTTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 222 166148 - 166166 + r 82 -12.4 -2.79302 | opp_overlap 166145 166148 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT TERM 223 166166 - 166148 - R 100 -11.7 -4.81306 | opp_overlap 166148, overlap 166145 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT dksA 166650 - 166195 - | DnaK transcriptional regulator DksA sfsA 167532 - 166828 - | sugar fermentation stimulation protein A TERM 224 167175 - 167196 + g 77 -6.6 -4.48175 | gap 1, opp_overlap 167170 167175, overlap 167189 GCAACATAAAGTCAA TACGGCTGC GTTCG GC-GCCGTA TTTTACTTCGCTTTT TERM 225 167490 - 167480 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC ligT 168086 - 167547 - | 2'-5' RNA ligase TERM 226 167796 - 167784 - G 74 -10.5 -3.15544 | CGCCAGCTGGATTAA GCCGC GTG GCGGC TGTCGCATCCCTAAC TERM 227 167915 - 167894 - G 70 -7.3 -4.07568 | opp_overlap 167894 TCCGTCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC TGCGCTCACTTCGCC UTI89_C0163 170675 - 170508 - | hypothetical protein hrpB 168106 - 170580 + | ATP-dependent RNA helicase HrpB TERM 228 172044 - 172030 - gRH 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAG mrcB 170674 - 173208 + | penicillin-binding protein 1b TERM 229 173248 - 173226 - TfRH 89 -14.9 -2.89742 | TCTAAGCGTGATATA CCGGATGGC GAGCT GCCATCCGG TAAAATAACATCCCC UTI89_C0165 173455 - 173273 - | hypothetical protein TERM 230 173333 - 173352 + gFH 75 -9.2 -3.68662 | GCGCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT TERM 231 174791 - 174772 - gH 87 -11.4 -3.66654 | opp_overlap 174765 GACTTCAATGCGAAA GACCCGGA TAAC TCCGGGCC GTACCGCATTCTGAA fhuA 173428 - 175671 + | ferrichrome outer membrane transporter TERM 232 175682 - 175703 + FH 87 -11.5 -3.5774 | overlap 175683 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCG TTTCACAAGTTGGCT TERM 233 175683 - 175702 + FH 89 -15 -2.74322 | overlap 175682 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC GTTTCACAAGTTGGC fhuC 175722 - 176519 + | iron-hydroxamate transporter ATP-binding subunit TERM 234 176542 - 176570 + G 70 -6.6 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGCCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 176516 - 177409 + | iron-hydroxamate transporter substrate-binding subunit TERM 235 177548 - 177562 + G 72 -4.3 -4.66163 | CGCCGGATATTGACG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 177406 - 179388 + | iron-hydroxamate transporter permease subunit TERM 236 179416 - 179394 - T 100 -19.2 -3.17392 | GAGCCGTTAATTGAA TGCCTCGCCC GGT GGGCGAGGCA AAATCATCACAACTT hemL 180703 - 179423 - | glutamate-1-semialdehyde aminotransferase TERM 237 180980 - 180956 - g 88 -11.4 -3.85698 | overlap 180959 CTCCCTCTTTAGAAA CACCGCAGGC CGCGC GCCTGCGACG CAGACAACTGATTCG TERM 238 180977 - 180959 - g 73 -11.7 -2.70946 | overlap 180956 CCTCTTTAGAAACAC CGCAGGC CGCGC GCCTGCG ACGCAGACAACTGAT TERM 239 181498 - 181516 + G 81 -4.4 -5.14682 | overlap 181500 CTGGCTGCGGCCTTT AACGCGCC GCT GGCGGGTA TTTTGTTTATTATCG TERM 240 181500 - 181514 + G 72 -7 -4.18024 | overlap 181498 GGCTGCGGCCTTTAA CGCGCC GCT GGCGGG TATTTTGTTTATTAT yadQ 180928 - 182349 + | chloride channel protein TERM 241 182637 - 182623 - g 75 -5.6 -4.68994 | opp_overlap 182623 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 182398 - 182775 + | iron-sulfur cluster insertion protein ErpA TERM 242 182782 - 182816 + T 73 -10 -3.06696 | overlap 182787 AGTATCTAATCTGCT GTTCATGTGCCGGATA AAC TATCCGGCACATCTCC TCTCTTCAACGACCA TERM 243 182787 - 182811 + T 100 -17.3 -2.92175 | overlap 182782 CTAATCTGCTGTTCA TGTGCCGGATA AAC TATCCGGCACA TCTCCTCTCTTCAAC yadS 183445 - 182822 - | hypothetical protein yadT 184283 - 183483 - | vitamin B12-transporter protein BtuF TERM 244 183662 - 183650 - G 71 -9.1 -3.50853 | CGCCTGTAATGACAA TCGCC TGT GGCGA GCGTGCTAACACCTG TERM 245 184266 - 184248 - G 88 -11.7 -3.79419 | overlap 184246 CGGCGCGAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGACTTAGCC mtn 184974 - 184276 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 185058 - 186575 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 246 187039 - 187053 + G 71 -9.2 -3.54029 | AACAGAAATTCATGG CGCTGG GTT CCGGCG TTATCATTGATGCCG degP 186705 - 188129 + | serine endoprotease TERM 247 188140 - 188163 + F 100 -14.6 -3.52093 | AGTAATCTCCCTCAA CCCCTTCCTG AAAA CGGGAAGGGG TTCTCCTTACAATCT TERM 248 189295 - 189311 + G 78 -8.7 -4.27441 | ATGTGCAACCGCTGG CAACGTC AAA GGCGTTG TTTATTCATCGTAAT cdaR 188307 - 189437 + | carbohydrate diacid transcriptional activator CdaR TERM 249 189477 - 189456 - T 74 -10.1 -3.15658 | overlap 189454 189452 GATTACAAAATTACA GCCGGGTGA GACT TTACCCGGC CCACAGAATGGCATT yaeH 189877 - 189491 - | hypothetical protein TERM 250 189749 - 189763 + g 75 -7.1 -4.40003 | AAACTTCACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA TERM 251 190182 - 190152 - R 79 -8.9 -3.92075 | opp_overlap 190151 190148, overlap 190156 190157 ATTCTGAGCCAGAAA GCAATCGGGCAGC GTCGT GCTGCCCGTGTAC ATACTTTTAGTCGAT TERM 252 190178 - 190156 - R 78 -10.5 -3.61988 | opp_overlap 190151 190148, overlap 190152 190157 TGAGCCAGAAAGCAA TCGGGCAGC GTCGT GCTGCCCGT GTACATACTTTTAGT TERM 253 190177 - 190157 - R 86 -14 -2.76711 | opp_overlap 190151 190148, overlap 190156 190152 GAGCCAGAAAGCAAT CGGGCAGC GTCGT GCTGCCCG TGTACATACTTTTAG dapD 191013 - 190189 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 254 190530 - 190549 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATACCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC glnD 193716 - 191044 - | PII uridylyl-transferase TERM 255 193752 - 193775 + r 79 -6.6 -4.73613 | opp_overlap 193756, overlap 193756 AAATTATTGCATTAA AAAAGCCGGC ATTC GCCGGCTTCA TTTTATTCGTCGTGC TERM 256 193756 - 193771 + r 93 -11.8 -3.83868 | opp_overlap 193756, overlap 193752 TATTGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC TERM 257 193771 - 193756 - R 100 -11.8 -5.15634 | opp_overlap 193756 193752 TATTGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC map 194572 - 193778 - | methionine aminopeptidase TERM 258 194522 - 194532 + g 74 -2.4 -5.15381 | overlap 194511 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 259 195350 - 195339 - g 72 -7.2 -4.24413 | overlap 195336 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 194940 - 195665 + | 30S ribosomal protein S2 UTI89_C0184 196546 - 195617 - | hypothetical protein TERM 260 195658 - 195646 - Gf 76 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCAC TERM 261 195717 - 195737 + gF 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 262 195972 - 195956 - Gg 77 -3 -5.13521 | gap 1, overlap 195957 195960 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 195800 - 196651 + | elongation factor Ts TERM 263 196662 - 196683 + FH 100 -13.7 -4.84761 | opp_overlap 196662 196665 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 264 196683 - 196662 - fH 93 -11.5 -4.23892 | opp_overlap 196662, overlap 196665 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 265 196680 - 196665 - fH 81 -11.8 -3.12324 | opp_overlap 196662, overlap 196662 AATTATCGAAAAGGA GCCGCC TGAG GGCGGC TTCTTTTTGTGCCCA pyrH 196798 - 197523 + | uridylate kinase TERM 266 197541 - 197585 + F 77 -11.5 -2.57501 | opp_overlap 197544, overlap 197540 197538 197537 197543 CCCGTGATGGATAAA TAAGGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCCGTA ATATGTTTAATCAGG TERM 267 197582 - 197544 - f 86 -11 -4.09117 | opp_overlap 197543 197541 197540 197538 197537 GTGATGGATAAATAA GGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCC GTAATATGTTTAATC frr 197673 - 198230 + | ribosome recycling factor TERM 268 198210 - 198230 + F 78 -8.3 -4.15044 | opp_overlap 198210 198211 198213, overlap 198211 198213 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 269 198230 - 198210 - f 78 -8.3 -4.14627 | opp_overlap 198210 198211 198213, overlap 198211 198213 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 270 198229 - 198211 - f 81 -11.8 -3.08294 | opp_overlap 198210 198211 198213, overlap 198210 198213 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 271 198211 - 198229 + F 81 -11.8 -3.08812 | opp_overlap 198211 198210 198213, overlap 198210 198213 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 272 198243 - 198291 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 198249, overlap 198244 198249 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 273 198244 - 198290 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 198249, overlap 198243 198249 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 274 198249 - 198285 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 198249, overlap 198244 198243 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 275 198285 - 198249 - f 100 -13 -4.98255 | gap 1, opp_overlap 198249 198244 198243 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC dxr 198322 - 199518 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 276 199623 - 199640 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG uppS 199704 - 200465 + | undecaprenyl pyrophosphate synthase cdsA 200478 - 201335 + | CDP-diglyceride synthase TERM 277 202179 - 202197 + GF 72 -8.8 -3.67976 | opp_overlap 202179, overlap 202194 CGTTAGAAATCGAAA GGCAGGGG AGT CCCTTGTC TTTGACATTAATCCC ecfE 201302 - 202699 + | zinc metallopeptidase TERM 278 203238 - 203227 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 279 203934 - 203966 + G 72 -10.5 -3.00704 | opp_overlap 203938, overlap 203930 203938 TGTCGATACCGATAC CCAACGTGTTCCGGG GAG CCCGGATCAGGTTGA TGTAGTTTACAAGGT TERM 280 203938 - 203962 + G 72 -9.9 -3.35344 | opp_overlap 203938, overlap 203934 203930 GATACCGATACCCAA CGTGTTCCGGG GAG CCCGGATCAGG TTGATGTAGTTTACA TERM 281 203962 - 203938 - g 70 -9.9 -3.14026 | opp_overlap 203938 203934 203930 GATACCGATACCCAA CGTGTTCCGGG GAG CCCGGATCAGG TTGATGTAGTTTACA ecfK 202729 - 205161 + | outer membrane protein assembly factor YaeT TERM 282 205260 - 205243 - f 72 -7.7 -3.96216 | overlap 205244 GGGCCACGCAAAGAA CTGCACC CTCC GGTGCAA ATGGGATGGTAAGGA TERM 283 205745 - 205717 - g 80 -11.8 -3.28712 | overlap 205702 205733 TGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 205283 - 205768 + | periplasmic chaperone TERM 284 205850 - 205825 - g 82 -13.3 -2.97245 | opp_overlap 205823, overlap 205820 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 205772 - 206797 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 285 206824 - 206861 + G 95 -12.7 -4.07515 | overlap 206826 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 286 206826 - 206859 + G 93 -13.1 -3.60967 | overlap 206824 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 206809 - 207357 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 287 207734 - 207720 - g 70 -10 -3.22298 | opp_overlap 207716 CTTACTGATGATCAA TGCGCA CAT TGCGCA CGATTGTACGGTAGG lpxA 207361 - 208149 + | UDP-N-acetylglucosamine acyltransferase TERM 288 208183 - 208204 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG lpxB 208149 - 209297 + | lipid-A-disaccharide synthase rnhB 209294 - 209890 + | ribonuclease HII dnaE 209927 - 213409 + | DNA polymerase III subunit alpha TERM 289 213575 - 213561 - g 74 -2.8 -5.00616 | GTTTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 213422 - 214381 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 290 214418 - 214401 - f 70 -6.9 -4.10453 | opp_overlap 214401 CAAATGTTCTGAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 291 214401 - 214418 + F 100 -9.1 -5.24129 | opp_overlap 214401 CAAATGTTCTGAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 292 215475 - 215491 + G 76 -8 -4.27617 | CACTTCGATTCTGCC TGGGTG CCGTA CACCCA TTTTCATCCAATCTA ldcC 214479 - 216620 + | lysine decarboxylase, constitutive TERM 293 216627 - 216610 - f 74 -5.5 -4.60487 | TACGAGTCCTAAAAA TGGCAGG ATAA CTTGCCA GAGCGGCTTCCGGGC yaeR 216677 - 217066 + | hypothetical protein TERM 294 217349 - 217328 - g 78 -8.7 -4.15543 | overlap 217331 217340 GAAACATTGTGAAAA CATCTGCCA ACAG TGGCAGGTG CCGCTGGTGGTCGAA tilS 217131 - 218429 + | tRNA(Ile)-lysidine synthetase TERM 295 218468 - 218436 - T 93 -12 -3.76952 | overlap 218456 CTTAGTTAAGTGAAA GCCGGATAAGACGC AACAA ACGTCGCATCCGGC GAAGTCAATCAGGAC rof 218737 - 218477 - | Rho-binding antiterminator yaeP 218942 - 218724 - | hypothetical protein TERM 296 218761 - 218774 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 297 219385 - 219372 - g 76 -8.1 -4.258 | opp_overlap 219381 CGACGGATTAAGAAA GCCTG CACC CAGGC CGCAGAAGTGGCGCT yaeQ 219090 - 219635 + | hypothetical protein yaeJ 219632 - 220054 + | hypothetical protein cutF 220068 - 220778 + | lipoprotein involved with copper homeostasis and adhesion TERM 298 220878 - 220909 + T 82 -10 -4.07568 | opp_overlap 220888, overlap 220879 TAGCACAATTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTTTGCGCACGAGGC TERM 299 220879 - 220908 + T 87 -13.5 -3.04398 | opp_overlap 220888, overlap 220878 AGCACAATTTTGTAG GCCGGATAAGGCG TTCA CGCCGCATCCGGC ATTTTGCGCACGAGG yaeF 221758 - 220934 - | hypothetical protein TERM 300 221801 - 221781 - R 100 -11.1 -5.10497 | opp_overlap 221781 AATCCATGTAAAAAA GGGCCCCGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 223529 - 221811 - | prolyl-tRNA synthetase TERM 301 223577 - 223559 - R 80 -11 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA yaeB 224347 - 223640 - | hypothetical protein TERM 302 224194 - 224219 + g 83 -12.6 -3.28924 | gap 1 AATGGCTGAATGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGGAGCAATG TERM 303 224244 - 224256 + g 70 -4.7 -4.57073 | overlap 224245 GCAATGAGATGTAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 224748 - 224344 - | outer membrane lipoprotein TERM 304 224612 - 224622 + g 74 -8.2 -3.92659 | overlap 224605 224616 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 305 224833 - 224805 - R 76 -6 -4.56775 | gap 1, opp_overlap 224806, overlap 224808 224811 AGGCGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 306 224831 - 224808 - R 95 -14.6 -3.23708 | opp_overlap 224806, overlap 224805 224811 CGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 307 224828 - 224811 - R 100 -12.7 -3.75505 | opp_overlap 224806, overlap 224808 224805 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 225681 - 224866 - | DL-methionine transporter substrate-binding subunit metI 226374 - 225721 - | DL-methionine transporter permease subunit metN 227398 - 226367 - | DL-methionine transporter ATP-binding subunit TERM 308 226688 - 226698 + g 77 -8.2 -4.13767 | overlap 226696 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA TERM 309 227922 - 227933 + G 75 -4.4 -4.82901 | opp_overlap 227922 GACTGCCGCAAACCA CATC CGGG GATG TTTTTGTCAGCACGC yaeD 227586 - 228158 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 310 228311 - 228297 - f 76 -4.2 -5.0916 | opp_overlap 228297, overlap 228298 228305 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 311 228343 - 228331 - f 72 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 312 229788 - 229778 - f 72 -3.2 -4.96848 | TGGCGCATACAAAAA GAAG CGA CCTC GCGAGAGCAAGCGGA TERM 313 230390 - 230353 - f 100 -6.3 -5.68438 | opp_overlap 230355 230370, overlap 230355 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 314 230355 - 230388 + F 77 -6.7 -4.49756 | opp_overlap 230353 230355, overlap 230370 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 315 230388 - 230355 - f 88 -8.9 -4.47052 | opp_overlap 230355 230370, overlap 230353 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 316 230998 - 230986 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 317 232299 - 232288 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 318 233641 - 233655 + F 71 -10 -2.82742 | opp_overlap 233641 233640 AAATTTAGCAGTAAG CCGGTT ATA AACCGG TGGTTGTAAAAGAAT TERM 319 233655 - 233641 - f 70 -10 -2.53908 | opp_overlap 233641, overlap 233640 AAATTTAGCAGTAAG CCGGTT ATA AACCGG TGGTTGTAAAAGAAT TERM 320 233765 - 233784 + F 100 -10 -6.0458 | opp_overlap 233764 233765 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGAGG TTTTTTTTCGTTTGT TERM 321 234679 - 234650 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 233915 - 234718 + | 2,5-diketo-D-gluconate reductase B TERM 322 234729 - 234746 + T 100 -11.3 -4.70659 | ATTAAGCCTCTCTGA CAGCTCC TCCG GGAGCTG TTTTTACATGTCCGC UTI89_C0227 235629 - 234715 - | putative transcriptional regulator LYSR-type TERM 323 235840 - 235821 - H 85 -11.4 -3.54771 | opp_overlap 235805 235806, overlap 235804 CCTATAACAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTGATAGAGG TERM 324 235936 - 235912 - g 72 -9.9 -3.28924 | opp_overlap 235911 235907 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 325 236535 - 236558 + G 82 -3.1 -5.18371 | overlap 236529 236530 236535 236533 CGATGATCAGCGCCG TCGGGCG TTTGGTCGCC CGCTCGA TTTTGTTTTCTACCG yafD 235846 - 236670 + | hypothetical protein TERM 326 236691 - 236716 + F 87 -8.3 -4.46212 | gap 1, opp_overlap 236675 236703, overlap 236676 236675 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGCCC TTTTATACTCAAACA yafE 236748 - 237518 + | hypothetical protein TERM 327 237547 - 237527 - T 100 -9.7 -5.73978 | opp_overlap 237527 AGCATAAATAAAAAA GGCACCG GGGGAAT CGGTGCC TTTCATTATCTGGTT TERM 328 237527 - 237547 + T 82 -10.4 -4.05848 | opp_overlap 237527 AGCATAAATAAAAAA GGCACCGG GGGAA TCGGTGCC TTTCATTATCTGGTT dniR 238923 - 237565 - | membrane-bound lytic murein transglycosylase D TERM 329 238264 - 238301 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 238273, overlap 238273 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 330 238273 - 238293 + g 70 -4.6 -4.46669 | opp_overlap 238273, overlap 238264 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 239750 - 238995 - | hydroxyacylglutathione hydrolase TERM 331 239376 - 239364 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT yafS 239766 - 240506 + | hypothetical protein rnhA 241081 - 240503 - | ribonuclease H dnaQ 241026 - 241766 + | DNA polymerase III subunit epsilon TERM 332 242005 - 242027 + FH 100 -11.4 -5.22312 | opp_overlap 242004 AATGAGTTCAGAGAG CCGCAAGATT TTT AATTTTGCGG TTTTTTCATCTAAAT TERM 333 242865 - 242855 - g 76 -4 -4.96762 | GACAGATTATAAAAA TCAA AAA TTGA CTGACACGATGTCAC yafT 242304 - 243089 + | putative aminopeptidase TERM 334 243312 - 243351 + T 100 -14.6 -4.2408 | opp_overlap 243311 243308 243326, overlap 243307 TCTATAAAACAGCAG GTACGGTTAATTAAGAAT TTTT ATTCGTGATTAACCGTAC TTTGTCATTTTATCC UTI89_C0237 243908 - 243429 - | hypothetical protein UTI89_C0238 245368 - 243926 - | hypothetical protein TERM 335 244666 - 244689 + gr 74 -11 -2.52543 | overlap 244620 CGGGTAGGGGGGGCA TGGTTTCCGC TGTG GCGGAAGCCG TGCCTTCAGGCGCAT TERM 336 244928 - 244915 - GR 76 -8.1 -4.19735 | opp_overlap 244914 TTTCGGAAAAGGAAA CCTGC TGGC GCAGG ATATTCCCGGTGCGG UTI89_C0239 248762 - 245295 - | hypothetical protein TERM 337 246876 - 246901 + gr 89 -11.9 -3.57263 | gap 1 ATCATAGGGGGTCCA GCGGCTGACAGC ATC GCTGTC-GCTGC TTTGGCGCTGCGCGT TERM 338 247935 - 247949 + gr 100 -7.8 -5.26316 | AAATGTGACGCCGAG GATCGC ATC GCGGTC TTTTTTATCCAGTGA TERM 339 248505 - 248516 + gr 74 -2.2 -5.1356 | overlap 248484 248483 GCGGTGGAGTTCCAC GGTC AACG GATC TTTTTCTTCCTCCCG UTI89_C0240 250284 - 248842 - | hypothetical protein TERM 340 249338 - 249350 + g 81 -4.7 -5.03715 | TCCAGCCAGTACGGG GCCAG CAG CAGGC TTTTTTCCACCTGCT TERM 341 249546 - 249582 + g 74 -8 -4.0044 | gap 1, opp_overlap 249549, overlap 249549 GCTGGCGCTCACAGA GAATGGCG-GCCACCTT TAGC AGGGTGTCGCGCCATGC TTTATCGTCGTGGTT UTI89_C0241 251032 - 250289 - | hypothetical protein TERM 342 250472 - 250448 - G 80 -11.3 -3.3514 | opp_overlap 250446 250463 ATCGATACCGGATAA CCCCCGGCTGG ACT CCAGCAGGGTG CCGTTCTCGCGCACA TERM 343 250705 - 250717 + g 71 -2.6 -4.9181 | GCAGCTCCGTGGTGT TGCC CTGGC GGCG TTTTTCCTGTTCTGT TERM 344 250891 - 250944 + g 70 -6.8 -4.03234 | overlap 250895 GTAACGTGGCTGTCG CATCCGGCGGT-GTCGCTGTGGCG ACAGCTAC CGCCACACCGGCCACTGAC-GATG TTTCTGTGGGCGCGG UTI89_C0242 253788 - 251029 - | hypothetical protein UTI89_C0243 254562 - 253798 - | hypothetical protein UTI89_C0244 255913 - 254567 - | hypothetical protein TERM 345 255367 - 255377 + g 74 -2.4 -5.07486 | overlap 255361 255360 TGTCCAGCACCAGCG CGCC GGT GGCA TTTTTATTGAGGATA UTI89_C0245 256440 - 255916 - | hypothetical protein TERM 346 256256 - 256310 + g 72 -10.7 -3.10164 | gap 2, overlap 256259 ACCGGCGCGGCTTCG CC-ATCCG-CCGTCAGGTTGCTGTCCG GCT CGGTCAGCAGCGTGACGGTCAGCTCGG TTGACTGATCCATCA UTI89_C0246 257729 - 256437 - | hypothetical protein UTI89_C0247 258783 - 257734 - | hypothetical protein TERM 347 258527 - 258515 - GR 77 -6.9 -4.56597 | opp_overlap 258515 TGGCTGCCGGAAAAA CCCAG GAA CCGGG TTTGCAGTACATACT TERM 348 258723 - 258738 + gr 100 -11.8 -4.46155 | TGCAGTTGCGCACAT CCGCCG GTAA CGGCGG TTTTGTCGCTATATC UTI89_C0248 260588 - 258747 - | hypothetical protein TERM 349 259308 - 259290 - GR 71 -8.9 -3.32022 | opp_overlap 259290 GTTGGTACAGATTAA TGACGTG GTGAT CACGTCA TCGTTAAACCGTGAG TERM 350 259805 - 259794 - GR 72 -4.4 -4.70659 | GCGCAGATGGAAAAA GAAG AAGG CTTC GGGATAGCAGAAATA TERM 351 259926 - 259891 - GR 81 -9.6 -4.07568 | gap 1, opp_overlap 259895 TCCCGGTTGTCAAAA CCCGCCGCCTCCAG-CC ACA GATCCGGCAGCGGCAGG CGGTACTCTCCGGCA UTI89_C0249 261019 - 260594 - | hypothetical protein TERM 352 260808 - 260824 + g 83 -12.3 -3.33483 | opp_overlap 260808, overlap 260803 ATTTCTCGTCTGAAA TCGCTGG AGG CCAGCGA TTCATCATTTAAATC TERM 353 260824 - 260808 - G 86 -12.3 -3.53091 | opp_overlap 260808 260803 ATTTCTCGTCTGAAA TCGCTGG AGG CCAGCGA TTCATCATTTAAATC UTI89_C0250 262508 - 261024 - | hypothetical protein TERM 354 261662 - 261640 - G 78 -7.6 -4.29738 | CGATACTTAGCAAAA CTTTCCGCCA GGT TGGCGGCCAG TAAAAACGAGGTATT TERM 355 262379 - 262368 - G 72 -7.2 -4.1552 | opp_overlap 262374 262375 CATGGCGGCAATAAA GGCG CTCA CGCC CTGGCGGGTGATATC UTI89_C0251 263034 - 262531 - | hypothetical protein TERM 356 263400 - 263388 - H 73 -6.3 -4.38273 | opp_overlap 263384, overlap 263384 263381 ATACATCATAAGAAA TTCCT TTA AGGAA TATCTTAATTGCGTG UTI89_C0252 263740 - 264258 + | hypothetical protein TERM 357 264297 - 264270 - f 89 -14.3 -3.09234 | opp_overlap 264270, overlap 264273 ATAAATCTGAGTCAA CAACATCCTGC CTCCGT GCAGGATGTTG TTTTTGTACGTGTAA TERM 358 264270 - 264297 + F 100 -14.3 -4.89852 | opp_overlap 264270 264273 ATAAATCTGAGTCAA CAACATCCTGC CTCCGT GCAGGATGTTG TTTTTGTACGTGTAA TERM 359 264294 - 264273 - f 78 -10.2 -3.68341 | opp_overlap 264270, overlap 264270 AATCTGAGTCAACAA CATCCTGC CTCCGT GCAGGATG TTGTTTTTGTACGTG TERM 360 264880 - 264859 - g 78 -10.9 -3.52919 | gap 1, opp_overlap 264858 264856 264859, overlap 264871 ATTACTGAACGAGAA CGGCGT-CAC AGA GTGGACGCCG CTGTTTTATGAGGAC TERM 361 264859 - 264880 + G 71 -10.9 -2.8733 | gap 1, opp_overlap 264859 264871, overlap 264858 264856 ATTACTGAACGAGAA CGGCGT-CAC AGA GTGGACGCCG CTGTTTTATGAGGAC UTI89_C0253 264479 - 266461 + | hypothetical protein UTI89_C0254 266568 - 267614 + | hypothetical protein UTI89_C0255 267607 - 269046 + | hypothetical protein UTI89_C0256 269021 - 269311 + | hypothetical protein TERM 362 269939 - 269903 - f 78 -6 -4.68424 | gap 2, opp_overlap 269928, overlap 269905 269928 CAATTGATGGAAAAA CGCTT-CGGC-ACTCTTA TGA CAAGAGTCGCCGCAAGGG AGCGATTTATGTCAT TERM 363 270153 - 270138 - f 73 -9 -3.52192 | TTTAACCGCAGAGAA GTTCGC CACA GCGAAC CGAAATCACTGGTAC TERM 364 271039 - 271065 + G 82 -3.1 -5.20154 | gap 1, opp_overlap 271053, overlap 271040 TTTAACTTGAGTGGT ACATTG-CCAAT TCAC ATTGGTCAATGA TTTTTTAAATTGTGT UTI89_C0257 270562 - 271065 + | hypothetical protein TERM 365 271394 - 271408 + G 74 -3.4 -4.99861 | opp_overlap 271382 271394, overlap 271396 AACGTCAGTTATTAA CCGGCT GGG GGCCTG TTTTTATAATTGGTG UTI89_C0258 271135 - 271647 + | hypothetical protein UTI89_C0259 272697 - 271918 - | hypothetical protein TERM 366 272401 - 272381 - G 74 -3.1 -4.91109 | overlap 272385 CGCTTATCATAAAAA TGTACCGTG CCG CCCGGCTCA ACCAGCAAAAAGCGG ykfE 272842 - 273315 + | vertebrate C-lysozyme inhibitor TERM 367 273332 - 273349 + T 100 -12.7 -3.73068 | opp_overlap 273332 TAGCCGATAAAAAAA CGGAGCC GAAA GGCTCCG TTATTCAATTACGCG TERM 368 273349 - 273332 - T 100 -12.7 -5.626 | opp_overlap 273332 TAGCCGATAAAAAAA CGGAGCC GAAA GGCTCCG TTATTCAATTACGCG fadE 275802 - 273358 - | acyl-CoA dehydrogenase TERM 369 275451 - 275470 + g 70 -4.2 -4.62069 | overlap 275435 CTGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 370 276279 - 276260 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 276254, overlap 276261 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCCATTTCTGACG gmhA 276042 - 276620 + | phosphoheptose isomerase TERM 371 276631 - 276662 + F 82 -10 -4.03078 | opp_overlap 276622 276641 276642, overlap 276632 276641 276642 AGTAAGTCTGGCGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGTGCTCTGATGC TERM 372 276632 - 276661 + F 87 -13.5 -3.01365 | opp_overlap 276622 276641 276642, overlap 276631 276641 276642 GTAAGTCTGGCGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTGTGCTCTGATG TERM 373 276642 - 276695 + F 81 -12.3 -2.56747 | opp_overlap 276641 276642, overlap 276632 276631 276641 276685 CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATTTG TGCT CTGATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 374 276695 - 276642 - f 81 -12.3 -2.57931 | opp_overlap 276632 276631 276642 276641 276685, overlap 276641 CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATTTG TGCT CTGATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 375 277552 - 277531 - g 74 -8.7 -3.91084 | opp_overlap 277546 TGACGGGCAATGAAA CCTGGCAAA AGAT TATGCCAGG TGAATGGCGCTTATT yafJ 276810 - 277592 + | putative amidotransferase yafK 278303 - 277563 - | hypothetical protein UTI89_C0265 278697 - 278560 - | hypothetical protein yafL 278672 - 279364 + | lipoprotein YafL precursor TERM 376 279364 - 279395 + FH 70 -10 -2.57683 | opp_overlap 279374, overlap 279363 279390 AGAGACGATTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCG GTTGTGCGCCGGTGT TERM 377 279390 - 279407 + FH 70 -9.8 -2.94099 | overlap 279364 279363 GCGTTCACGCCGCAT CCGGCG GTTGTG CGCCGG TGTCTGATGCGACGC TERM 378 279418 - 279430 + FH 73 -9.1 -3.4252 | overlap 279417 GCCGGTGTCTGATGC GACGC TAC GCGTC TTATCATGCCTACAA yafM 279540 - 280037 + | hypothetical protein TERM 379 280105 - 280136 + T 70 -10 -2.57564 | opp_overlap 280091 280090 280115, overlap 280104 280116 CCGCGCTCACCCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCG GTTGTGCACCGGTGC UTI89_C0268 280329 - 280120 - | hypothetical protein fhiA 282096 - 280357 - | FhiA protein TERM 380 282698 - 282667 - gH 77 -5.8 -4.62069 | gap 1, opp_overlap 282668 282669, overlap 282675 GCTGGATGCCAAAAA TCCGCAAAGCGCGGG CAA CCGGCGCATTG-AGA TTATGGTGCTGACCA TERM 381 282691 - 282675 - gH 75 -9.3 -3.68853 | opp_overlap 282669 282668, overlap 282667 CCAAAAATCCGCAAA GCGCGGG CAA CCGGCGC ATTGAGATTATGGTG mbhA 282038 - 282826 + | hypothetical protein dinP 282897 - 283952 + | DNA polymerase IV TERM 382 284194 - 284183 - g 76 -3.6 -4.9934 | ACAAGAGGAGAAAAA GCCC ATAA AGGC GCGCTTCCGTCCGAG yafN 284004 - 284297 + | putative antitoxin of the YafO-YafN toxin-antitoxin system yafO 284300 - 284698 + | putative toxin YafO yafP 284708 - 285160 + | hypothetical protein TERM 383 286237 - 286212 - g 95 -6.7 -5.26875 | TTGCGAACGAAAAAA CGCTCCACTCG CTGG CGCATGGGGCG GGGCGTAAATGGGGG UTI89_C0275 285338 - 286489 + | hypothetical protein prfH 286600 - 287100 + | peptide chain release factor-like protein TERM 384 287144 - 287113 - T 100 -17.3 -2.8785 | overlap 287105 287132 TAATGAAGGATGATA CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG CAAATCAAATAATTA pepD 288614 - 287157 - | aminoacyl-histidine dipeptidase (peptidase D) TERM 385 287276 - 287297 + g 71 -2.2 -5.00616 | opp_overlap 287276, overlap 287270 TTGGCCCGATAGACA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGGCC TERM 386 288212 - 288222 + g 72 -6.8 -4.25104 | GCACTTCCAGCGGGC CGTG AAC CACG TTTTCGTCAGCCAGA TERM 387 288595 - 288572 - G 90 -9 -4.57837 | gap 1, opp_overlap 288574 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG UTI89_C0279 289459 - 289007 - | hypothetical protein gpt 288875 - 289333 + | xanthine-guanine phosphoribosyltransferase TERM 388 289337 - 289367 + gF 90 -7.4 -4.74103 | overlap 289340 TCCGGTCGCTAATCT TTTCAACGCCTGGC ACT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 389 289340 - 289364 + gF 100 -17.9 -4.47888 | overlap 289337 GGTCGCTAATCTTTT CAACGCCTGGC ACT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 390 289950 - 289973 + GH 72 -4.4 -4.70659 | overlap 289951 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 289425 - 290669 + | fermentation/respiration switch protein TERM 391 290700 - 290682 - fH 75 -9 -3.61889 | opp_overlap 290674, overlap 290674 TAAAAATTTGCTAAA TTTTACCA ATT TGGTAAAA CAGTTGCATCACAAC crl 290727 - 291128 + | DNA-binding transcriptional regulator Crl TERM 392 291199 - 291230 + T 70 -10 -2.54276 | opp_overlap 291209, overlap 291198 291197 TTCGTAGTTTTCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA ATATTCATTAAAACT phoE 292299 - 291238 - | outer membrane phosphoporin protein E TERM 393 291835 - 291855 + g 76 -9 -3.79519 | gap 1 GTCGGTGTTCCGATA CGTCGCCAG ACCG CTGGCG-CG TTTGGTCATAAAGTT TERM 394 292000 - 292010 + g 79 -2.4 -5.21709 | TTTCAACCCGGCAAA AGCG AGA CGCG TTTTTTGCTGTGCAG TERM 395 292348 - 292326 - H 76 -10.6 -3.04501 | ATTAACGCGCGAATA TTCAGCGGGA GAG TCCCGTTGAA AACAGGAAAGTTTTT proB 292582 - 293685 + | gamma-glutamyl kinase proA 293697 - 294950 + | gamma-glutamyl phosphate reductase TERM 396 294957 - 295011 + F 72 -8.4 -3.69437 | opp_overlap 294957, overlap 295010 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 397 295011 - 294957 - f 89 -8.4 -4.86731 | opp_overlap 294957 295010 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG UTI89_C0286 295228 - 297168 + | putative integrase TERM 398 297192 - 297215 + T 100 -11.8 -5.45652 | gap 1 TCTCTCTTTCTCTAA CGCGCTCAGAA CGA TTCTG-GCGCG TTTTTTATTAAGGGT UTI89_C0287 297624 - 297292 - | hypothetical protein UTI89_C0288 299625 - 297787 - | hypothetical protein TERM 399 299166 - 299187 + g 87 -4.5 -5.27335 | gap 1, opp_overlap 299166 ATGTGAATTTATATA CGTCTGATAA GTT TTG-CAGACG TTTTTCTTTGGAAAC TERM 400 299493 - 299516 + g 77 -8.2 -4.07568 | opp_overlap 299510 TCTTCAAAATCATTT CCAGAACATT AACT AAAGTTCTGG TTTTACCAGAGCCAG TERM 401 299528 - 299510 - G 74 -7.4 -4.01071 | opp_overlap 299493 AGAACATTAACTAAA GTTCTGGT TTT ACCAGAGC CAGCTCCAGCATAAA UTI89_C0289 301769 - 299622 - | hypothetical protein UTI89_C0290 302117 - 302680 + | putative resolvase UTI89_C0291 303335 - 302838 - | hypothetical protein TERM 402 303900 - 303911 + G 70 -5.8 -4.26681 | opp_overlap 303899 AGTAGGAGATAAAGC CGCT CAGA AGCG TTTTGGCTCGTTTAT UTI89_C0292 303574 - 304038 + | putative transcription regulator TERM 403 304266 - 304246 - T 84 -6.9 -5.08824 | opp_overlap 304250, overlap 304250 GGTGGATTCAAAAAA TAAACTCAC TCC GTGAGTTTT TGTAAGTTTTATTTT TERM 404 304262 - 304250 - T 87 -7.7 -5.0666 | opp_overlap 304250, overlap 304246 GATTCAAAAAATAAA CTCAC TCC GTGAG TTTTTGTAAGTTTTA TERM 405 304250 - 304262 + T 87 -7.7 -4.97402 | opp_overlap 304250 304246 GATTCAAAAAATAAA CTCAC TCC GTGAG TTTTTGTAAGTTTTA TERM 406 304345 - 304330 - T 70 -10.4 -2.61548 | opp_overlap 304341, overlap 304327 304326 TTCTATGATAACTCA GGCTGC GTAA GCAGCC CGTCGCGACAAAGTC TERM 407 304346 - 304366 + T 74 -11.1 -2.75471 | opp_overlap 304327 304326, overlap 304345 304341 GCTGCGTAAGCAGCC CGTCGCGAC AAA GTCGCGACC CTGTTATTTGGTAAT UTI89_C0293 305459 - 304545 - | hypothetical protein TERM 408 304828 - 304844 + g 87 -4.3 -5.17576 | CCTTGTTGAAGTTTC CGCCATG AAT CACGGTG TTTTTTAGATTGATA UTI89_C0296 306371 - 305979 - | hypothetical protein UTI89_C0295 305929 - 306267 + | CP4-like integrase TERM 409 306510 - 306538 + Tr 100 -3.2 -6.01369 | opp_overlap 306510 TCTTTTAAATAACAA CGCCATTAAAAA CGCTT TGTTTAATGACG TTTTTTTATTGTTTC UTI89_C0297 307226 - 306702 - | hypothetical protein TERM 410 307129 - 307143 + g 82 -2.7 -5.31158 | opp_overlap 307118 307116, overlap 307130 AACAGACTCTCCTGA GCCGG GTATG CCGGA TTTTTGATTTTTTTG TERM 411 307347 - 307309 - H 95 -12.5 -3.60214 | opp_overlap 307319, overlap 307310 307319 307327 ACCGTAATCAGATAA TCGCAGCAAAGGGACAA AGCAA TAGTCCCTTTGCTGCAC AGCATCAGAATGAAT TERM 412 307346 - 307310 - H 100 -16 -2.75647 | opp_overlap 307319, overlap 307309 307319 307327 CCGTAATCAGATAAT CGCAGCAAAGGGACAA AGCAA TAGTCCCTTTGCTGCA CAGCATCAGAATGAA TERM 413 310562 - 310551 - H 80 -5.8 -5.1675 | opp_overlap 310550 310551 TGAGGCATTAAAAAA GACG GGAG CGTC ATTATCCTCTGAATA TERM 414 311332 - 311312 - H 72 -9.7 -3.14344 | GATTGTTGCCACCAA CCGTTGATG CAC CAGCAACGG TTGGGAGTAATGCAG TERM 415 311593 - 311616 + H 100 -11.2 -4.86621 | opp_overlap 311593 311597, overlap 311597 TTAGCTATATAATTA TAAATGTGAC ATAT GTCACATTTA TTTTTGCTTAAAACT TERM 416 311616 - 311593 - H 78 -11.2 -2.89793 | opp_overlap 311593 311597, overlap 311597 TTAGCTATATAATTA TAAATGTGAC ATAT GTCACATTTA TTTTTGCTTAAAACT TERM 417 311597 - 311612 + H 84 -7.6 -4.96773 | opp_overlap 311593 311597, overlap 311593 CTATATAATTATAAA TGTGAC ATAT GTCACA TTTATTTTTGCTTAA TERM 418 311612 - 311597 - H 72 -7.6 -4.12397 | opp_overlap 311597 311593, overlap 311593 CTATATAATTATAAA TGTGAC ATAT GTCACA TTTATTTTTGCTTAA TERM 419 311786 - 311802 + H 88 -3.7 -5.49568 | overlap 311784 TGGTATATATGGATA TCGACGA TAT TTGTTGA TTTTTATTTTAAATT UTI89_C0298 311796 - 311993 + | hypothetical protein insA 312076 - 312291 + | InsA protein TERM 420 312342 - 312381 + TF 78 -10 -3.60412 | opp_overlap 312330 312348 AGCTCTCGCCCCAGC GGATAACATCTGCGTCAG TCAG CTCACGCTGATGTTGCCC TTATCTGTGAACTTG insB 312757 - 312482 - | hypothetical protein UTI89_C0301 312593 - 312769 + | InsB protein UTI89_C0302 313148 - 313378 + | hypothetical protein TERM 421 313385 - 313367 - f 100 -11.7 -5.24129 | GTTTTGCATAAAAAA GCCCACC ATTAA GGTGGGC AAAAGGAATGATTTA yagU 313593 - 314207 + | hypothetical protein TERM 422 314226 - 314244 + T 91 -8.8 -4.91712 | opp_overlap 314226 TTTGAATGATAAAAA TGGCGCAA ATA TAGCGCCA TTTTTATAGGTTAAA TERM 423 314244 - 314226 - T 91 -8.8 -4.98255 | opp_overlap 314226 TTTGAATGATAAAAA TGGCGCAA ATA TAGCGCCA TTTTTATAGGTTAAA TERM 424 314433 - 314409 - T 79 -9.9 -3.80855 | TCCCTGAAAAACGAA GCCCCGCTATT ACA ACTGGCGGGGC AATGCAATTAATTAT ykgJ 314785 - 314456 - | putative ferredoxin yagV 315847 - 315092 - | hypothetical protein TERM 425 315403 - 315418 + gr 73 -6 -4.42788 | overlap 315402 CCGTGCTGACCTCAC CGCCGC TTGG GCTGCG TTTTGTCAGGTTACG TERM 426 315715 - 315702 - GR 72 -4.5 -4.66609 | GACGGCAGTGAAAAA GTCAG ATTG CCGAC CGAAATCGCCTGTGT yagW 317414 - 315771 - | hypothetical protein TERM 427 316895 - 316906 + gr 70 -5.8 -4.1711 | TCATTGTAAAGCTGC TGCC GACG GGCA TTTGTTGCAGATACT yagX 319929 - 317404 - | hypothetical protein TERM 428 317931 - 317965 + g 100 -12.1 -4.62069 | overlap 317934 TGTCGAATATCACCC CAGCGTTGCCATCGG TCCGC CCGCTGGCAGCGATG TTTTTACCCTGCCAG TERM 429 317934 - 317962 + g 78 -12.4 -2.95166 | overlap 317931 CGAATATCACCCCAG CGTTGCCATCGG TCCGC CCGCTGGCAGCG ATGTTTTTACCCTGC yagY 320671 - 319955 - | hypothetical protein TERM 430 320663 - 320646 - G 95 -12.7 -4.24342 | CCGTCCAGGAATAAA GCAGGGG GGTA CCCCTGC TGGTACATCAGAGAG matB 321297 - 320680 - | MatB precursor TERM 431 320882 - 320912 + g 91 -7.6 -5.07567 | overlap 320883 CCGCCCAGTACGCCG TTGGCGGTATCG ATCATCA CGGTATCGCCAG TTTTTTCGACTGTCG TERM 432 321125 - 321150 + g 91 -7.5 -5.1615 | opp_overlap 321132, overlap 321127 AGGCTACCGAGTGGC GTCACAACCAG CTTA CTGGTGGTGTC TTTTTTGGCTGTTGC TERM 433 321127 - 321148 + g 78 -8.7 -4.20118 | opp_overlap 321132, overlap 321125 GCTACCGAGTGGCGT CACAACCAG CTTA CTGGTGGTG TCTTTTTTGGCTGTT matA 321930 - 321340 - | hypothetical protein TERM 434 321958 - 321942 - RH 75 -9.5 -3.56092 | opp_overlap 321942 TCACTACTTTCCAAA CCTGTAA TTT TTACAGG TACATTCAGTTTCTT UTI89_C0311 322559 - 322335 - | hypothetical protein UTI89_C0312 322354 - 322644 + | hypothetical protein TERM 435 322914 - 322882 - TR 100 -13 -4.26344 | opp_overlap 322886 ACATCCCCAGGAAAA TTAATGCTGGTGTA ATAAA TACACCAACATTAA TCCGGTCTGATTATT rpmJ 323109 - 322966 - | 50S ribosomal protein L36 rpmE2 323369 - 323106 - | 50S ribosomal protein L31 type B TERM 436 323881 - 323859 - R 77 -4.8 -5.00616 | opp_overlap 323861, overlap 323861 CCTCGCTTTAAAAAA GAGTGCACTT CGT AAGTGCCCTT ATATAAATAACGAGT TERM 437 323879 - 323861 - R 72 -7.4 -4.13561 | opp_overlap 323861, overlap 323859 TCGCTTTAAAAAAGA GTGCACTT CGT AAGTGCCC TTATATAAATAACGA TERM 438 323897 - 323908 + r 77 -4.4 -5.08169 | ATATAAATAACGAGT TTGG TCAA CCAA TTTTTTGACATGTAT UTI89_C0315 325451 - 324309 - | putative NADH-dependent flavin oxidoreductase TERM 439 325376 - 325399 + g 82 -2.4 -5.36441 | opp_overlap 325382, overlap 325380 325382 TTGTCATAGGAGCCA TAACGATACG ATTA CGTAGCTTTA TTTTTTCTGTCAGCA TERM 440 325380 - 325395 + g 77 -3.2 -5.16969 | opp_overlap 325382, overlap 325376 325382 CATAGGAGCCATAAC GATACG ATTA CGTAGC TTTATTTTTTCTGTC TERM 441 325616 - 325589 - R 82 -9.3 -4.20981 | gap 1, opp_overlap 325588 TCAATAAAGGATAAA TGTCAGGGAGAT AATGA ATCTCCCTG-CA AGGTTATTACAAATG ycjY 326543 - 325623 - | hypothetical protein TERM 442 327315 - 327329 + G 70 -6.4 -4.20712 | AAAAGTAGCGGTGCA CTCTCA GCA TGGGAG TTTTCGAATGTTGTG UTI89_C0317 326637 - 327626 + | putative LysR-like transcriptional regulator ycjZ 327751 - 328719 + | transcriptional regulator YcjZ TERM 443 328741 - 328720 - T 72 -8.7 -3.70773 | opp_overlap 328720 CGCTACACCGAATAA CGGGTCC TTTATCCT GGACCCG TTTGGGTATTAGCGG TERM 444 328720 - 328741 + T 75 -8.7 -3.76373 | opp_overlap 328720 CGCTACACCGAATAA CGGGTCC TTTATCCT GGACCCG TTTGGGTATTAGCGG UTI89_C0319 329739 - 328750 - | putative aldo/keto reductase TERM 445 328987 - 329010 + g 80 -5.2 -4.90013 | overlap 328989 CCCTTTCTCCGCAGC CAGTTCACCT AACA AGGTGACCAG TTTTTCATTGGCTTC UTI89_C0320 330617 - 329766 - | 2,5-diketo-D-gluconic acid reductase A TERM 446 330439 - 330460 + g 70 -6.5 -4.23781 | GCGATACCGCTTTGT TTCAGGGCG TTCC CGACCTGGA TTTCATTTTGATAAG TERM 447 331094 - 331071 - H 77 -11.2 -2.73529 | overlap 331067 331068 TCTTACATAAAGGTA TTTCCTTTTC TGTG GAAAAGGAAA CCGGGAAATCCCCGG TERM 448 331109 - 331095 - H 82 -9.2 -4.19735 | opp_overlap 331095, overlap 331067 331068 CTGTGGAAAAGGAAA CCGGGA AAT CCCCGG TTTTTCTGACAAGCA TERM 449 331095 - 331109 + H 89 -8.5 -4.82901 | opp_overlap 331067 331068 331095 CTGTGGAAAAGGAAA CCGGG AAATC CCCGG TTTTTCTGACAAGCA TERM 450 331888 - 331852 - g 80 -5.7 -5.00616 | opp_overlap 331880 331881 TCTGGCTGGAAAAAA TCGCCGGATGTTGAGGA TTA TCAGGAACGCCCGGCGA ATGGCTGGGATATTC TERM 451 335098 - 335088 - g 71 -2.4 -4.91109 | CGCGGATGATAAAAA CGCG GTG CTCG CTGCATCTCCAGAGC eaeH 331183 - 335433 + | attaching and effacing protein, pathogenesis factor TERM 452 335483 - 335455 - T 74 -7.5 -4.22554 | opp_overlap 335455 335458 CGATGTAATAAATAA TAATGGCGTTG ACATGCG CAGCGCCATTA TTTACTGAATACCTA TERM 453 335455 - 335483 + T 79 -9.7 -3.767 | opp_overlap 335455, overlap 335458 CGATGTAATAAATAA TAATGGCGTTG ACATGCG CAGCGCCATTA TTTACTGAATACCTA TERM 454 335458 - 335480 + T 70 -7 -4.015 | opp_overlap 335455, overlap 335455 TGTAATAAATAATAA TGGCGTTG ACATGCG CAGCGCCA TTATTTACTGAATAC TERM 455 335490 - 335537 + T 71 -8.6 -3.55219 | gap 2, opp_overlap 335495, overlap 335492 GCGCCATTATTTACT GA-ATACC-TACCCTGGCACCG ATTAGA CGGTGGCAGGGTAGGGTAAATC TTATGTGATGGAGTT TERM 456 335492 - 335534 + T 77 -11.4 -2.6062 | gap 1, opp_overlap 335495, overlap 335490 GCCATTATTTACTGA ATACC-TACCCTGGCACCG ATTAGA CGGTGGCAGGGTAGGGTAA ATCTTATGTGATGGA TERM 457 335530 - 335495 - T 100 -19.1 -3.10056 | opp_overlap 335492 335490 ATTATTTACTGAATA CCTACCCTGGCACCG ATTAGA CGGTGGCAGGGTAGG GTAAATCTTATGTGA ykgA 336448 - 335558 - | transcriptional regulator YkgA UTI89_C0323 336648 - 337532 + | 2,5-diketo-D-gluconic acid reductase A ykgB 338294 - 337692 - | hypothetical protein ykgI 338548 - 338297 - | hypothetical protein TERM 458 338602 - 338633 + r 100 -12.4 -4.45261 | overlap 338600 338605 TAAGATTCTTTTCTC TGAGACGCCAGAAT ATTT GTTCTGGCGTCTGA TTTTGAGTTTATTTG TERM 459 338605 - 338630 + r 95 -14.1 -3.16695 | overlap 338600 338602 GATTCTTTTCTCTGA GACGCCAGAAT ATTT GTTCTGGCGTC TGATTTTGAGTTTAT ykgC 339967 - 338642 - | pyridine nucleotide-disulfide oxidoreductase TERM 460 339402 - 339392 - G 81 -6.8 -4.65895 | TTCCCGAGGCAAAAA CAGC GAA GCTG CCTCTAAAATGGTTA TERM 461 340197 - 340177 - g 79 -2.6 -5.26875 | gap 1, overlap 340181 TTTGTAATCAAAAAA CCAC-TCAG GAGT CTGATATGG ATGCTCTTAGCCGTT ykgD 340143 - 341048 + | transcriptional regulator YkgD ykgE 341575 - 342294 + | hypothetical protein ykgF 342305 - 343732 + | putative electron transport protein YkgF ykgG 343572 - 344420 + | hypothetical protein UTI89_C0332 344587 - 344375 - | hypothetical protein TERM 462 344534 - 344560 + g 81 -11 -3.66178 | opp_overlap 344534 CAGCTCTTCTGTAAA TATCCTGACATT AAT AATGCCAGGATA TTTACAGTTAAAAAG TERM 463 344560 - 344534 - G 90 -13.2 -3.53224 | opp_overlap 344534 CAGCTCTTCTGTAAA TATCCTGACATT AAT AATGCCAGGATA TTTACAGTTAAAAAG TERM 464 344592 - 344577 - G 72 -7.6 -3.96999 | TTACAGTTAAAAAGA CAGGAA TCCA TTCCTG AAGACGGGCTCCTTC TERM 465 344681 - 344696 + r 81 -3.3 -5.40072 | TGCCCAGAGTTTTGT TGGTA TTCATC TACCA TTTTTTTGACAAGGC ykgH 345330 - 344662 - | hypothetical protein UTI89_C0334 347844 - 345514 - | hypothetical protein UTI89_C0335 348614 - 347853 - | hypothetical protein TERM 466 347903 - 347925 + g 70 -7.1 -4.09243 | gap 1, opp_overlap 347908 CTGCATTTACCACCA CGG-AATACC TGTT GGTATTTCCG TTTTCACGCAATGTC TERM 467 348393 - 348381 - G 87 -4.7 -5.24129 | CGGTGGCAGAAAAAA GGGCG CGA CGCAC AACACCACCACGAAT TERM 468 348435 - 348411 - G 73 -11.5 -2.80492 | opp_overlap 348411 348410 CACCACCACGAATGA GTGATCCCGAT AAA ATCGGAACCAC ATTTCAGCGCATTCG UTI89_C0336 349472 - 348768 - | hypothetical protein UTI89_C0337 349599 - 349444 - | hypothetical protein TERM 469 349587 - 349623 + gr 100 -18.3 -3.74872 | opp_overlap 349592, overlap 349592 TCCACGCCATTGCTA CAAAACCTGACATTTTG ATT CAAAATGTCAGGTTTGG TTTAATAGCCTGAAT TERM 470 349592 - 349618 + gr 100 -16.8 -4.10552 | opp_overlap 349592, overlap 349587 GCCATTGCTACAAAA CCTGACATTTTG ATT CAAAATGTCAGG TTTGGTTTAATAGCC TERM 471 349618 - 349592 - GR 100 -16.8 -4.38712 | opp_overlap 349592 349587 GCCATTGCTACAAAA CCTGACATTTTG ATT CAAAATGTCAGG TTTGGTTTAATAGCC fimX 350494 - 349892 - | type 1 fimbriae regulatory protein FimX TERM 472 350962 - 350973 + H 76 -3 -5.2197 | opp_overlap 350962 ATAAATTAAAAATAT TCAT TTAA ATGA TTTTTACTTTTTGTA UTI89_C0339 351273 - 351500 + | hypothetical protein betA 353213 - 351525 - | choline dehydrogenase TERM 473 353190 - 353168 - G 76 -11.2 -3.35996 | overlap 353169 GACGGGTAGCGAGAA CGTTGCCGGC TGA GCCGGCACCA ATAATGATGTAGTCA TERM 474 353189 - 353169 - G 76 -12.5 -2.61383 | overlap 353168 ACGGGTAGCGAGAAC GTTGCCGGC TGA GCCGGCACC AATAATGATGTAGTC betB 354702 - 353227 - | betaine aldehyde dehydrogenase betI 355318 - 354713 - | transcriptional regulator BetI TERM 475 355099 - 355087 - G 72 -6.9 -4.21275 | GTAATCGATTCAAAA CCGCG TCA CGCAG CTGACTGGTGATATC TERM 476 355120 - 355139 + g 81 -5.8 -4.87665 | gap 1 TGGTGATATCGCGCA TGGT-TGCT TCC AGCAGACCA TTTTTGTCCCTGAAA TERM 477 355196 - 355180 - G 78 -9.3 -3.86346 | opp_overlap 355169 355195 TGATCCCCGTAGAAA CGCCTGC ACG GCGGGCG ATCTGCGCGATCGTT TERM 478 355461 - 355506 + G 91 -10.6 -4.21812 | gap 1, opp_overlap 355459 355461 355466, overlap 355466 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 479 355506 - 355461 - g 72 -10.6 -3.11922 | gap 1, opp_overlap 355461 355466, overlap 355459 355466 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 480 355501 - 355466 - g 72 -4.7 -4.67635 | gap 1, opp_overlap 355461 355466, overlap 355461 355459 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 481 355466 - 355501 + G 81 -4.7 -5.093 | gap 1, opp_overlap 355466 355461 355459, overlap 355461 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 482 356478 - 356490 + G 71 -9.1 -3.56576 | TACCATTCGCCAGTT CGTGC TGG GCACG TTGATTATTCCGTTT TERM 483 357157 - 357147 - g 74 -2.4 -5.08824 | overlap 357148 CGTGGAGCTAAAAAA CCTG CCG CCGG AAGAGGGACAACAGT betT 355429 - 357462 + | choline transport protein BetT TERM 484 357479 - 357504 + F 100 -15.5 -4.23281 | opp_overlap 357479 TGTTATTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT TERM 485 357504 - 357479 - f 100 -13.3 -4.4009 | opp_overlap 357479 TGTTATTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT TERM 486 358766 - 358813 + G 76 -7.6 -4.29106 | opp_overlap 358791 358792, overlap 358770 358797 ACGGGCTGTGAAGTG CTTGTCCGCTGGGAACATCCAC AAAC GGGAATGATCCCACCGGATCAG TTTATTCCTCTGGCG yahA 358334 - 359428 + | hypothetical protein yahB 360402 - 359470 - | transcriptional regulator YahB TERM 487 359516 - 359532 + g 79 -3.7 -5.15634 | overlap 359519 ATCCCCGTTAATATG CCATTTG GCG CAAATTG TTTTTTAATCCACTG TERM 488 359519 - 359529 + g 70 -4 -4.67552 | overlap 359516 CCCGTTAATATGCCA TTTG GCG CAAA TTGTTTTTTAATCCA yahC 360991 - 360494 - | hypothetical protein UTI89_C0347 361068 - 361310 + | hypothetical protein yahD 361249 - 361854 + | putative transcription factor yahE 361894 - 362757 + | hypothetical protein TERM 489 362842 - 362828 - g 90 -10 -4.41616 | ACGCGTGCAAATAAA CTCGAC GGC GTCGAG CAGGCATTTGTGGCG TERM 490 363051 - 363020 - g 86 -10.8 -3.92324 | opp_overlap 363038 CTGTTCAACACCAAA GCGCAAAGCGGCTC GCAC GAGGCGCGTTACGC CACTATTGCCAGCGC yahF 362747 - 364294 + | hypothetical protein TERM 491 364489 - 364478 - g 72 -5.8 -4.3739 | overlap 364479 CACTGGCGGACAAAA TCGC CTCC GCGA ATCAGCAGGCGCTGG yahG 364294 - 365712 + | hypothetical protein yahI 365866 - 366816 + | putative carbamate kinase TERM 492 367064 - 367032 - g 72 -6.2 -4.30576 | gap 1 TTTTGACTACGAAAA TGGCGTGGCGGTGCA GACC CGCACGGCG-CGCCA GACTGTGGAAATTCA TERM 493 367426 - 367410 - g 72 -5.1 -4.56597 | overlap 367411 TTCCGGCCTGAAAAA TCTGCAA AAT TTGCAGG CGGTGCTGGCGCGAC yahJ 366826 - 368208 + | deaminase TERM 494 368269 - 368253 - f 72 -9.4 -3.19889 | opp_overlap 368248, overlap 368246 CAGTAAGAGATTTAA GCCCCA GGGAG TGGGGC ATCAATGGTTTGCTA UTI89_C0354 368476 - 368916 + | hypothetical protein UTI89_C0355 369167 - 370153 + | putative periplasmic binding protein, substrate ribose TERM 495 370163 - 370180 + F 100 -12.7 -3.9461 | TATTAATCCATTTCT TCGGGGC GAAA GCCCCGA TTCTTATTGCCAGGG TERM 496 370977 - 370958 - g 95 -12.2 -4.18018 | overlap 370962 TTGTGGCAGGGAAAA TCCAGCAC CCCG GTGCTGGA GGTGCGTAATTTAAG UTI89_C0356 370187 - 371686 + | ABC transporter ATP-binding protein UTI89_C0357 371679 - 372650 + | permease TERM 497 373315 - 373327 + G 71 -3.3 -4.79223 | TTCCGCCTTGCTTTG TGCGG TAG CGGCA TTTTTGATGATGTCG UTI89_C0358 372647 - 373603 + | permease TERM 498 374345 - 374335 - g 77 -8.2 -4.14392 | CGCGAAGCGGCAAAA GCCC TGG GGGC CGATGAAGTTGTTAA yahK 373690 - 374739 + | zinc-type alcohol dehydrogenase-like protein YahK TERM 499 374813 - 374776 - f 95 -12.9 -3.37493 | opp_overlap 374776, overlap 374777 GGTTTAACATATTAA CTTCGCTCCACTTAACT TTTT AGTTAAGGAGAGCGAAA TAATATCAAAGTAGT TERM 500 374812 - 374777 - f 87 -14.2 -2.62175 | opp_overlap 374776, overlap 374776 GTTTAACATATTAAC TTCGCTCCACTTAACT TTTT AGTTAAGGAGAGCGAA ATAATATCAAAGTAG TERM 501 375496 - 375475 - g 95 -7.2 -5.31059 | AGAGCAATGAAAAAA GCCCACAC AGGGGA GAGTGGGC TGAAATGGGAAGCTA yahM 375331 - 375606 + | hypothetical protein yahN 376294 - 375623 - | putative cytochrome subunit of dehydrogenase TERM 502 376118 - 376100 - G 72 -4.4 -4.65747 | overlap 376101 CAACCCGGAATAAAA CGCATCGC CCA GCGCCACG CCCAGTCCGGTCAGC yahO 376441 - 376716 + | hypothetical protein TERM 503 377584 - 377615 + F 83 -12.4 -3.04461 | gap 1 CAAACGGATGCGACT TTTTGCCCTGTCGCG CAT CGTGGC-GGGCAAAA TATTCCCGATGAATC TERM 504 378970 - 378960 - g 72 -8.2 -3.80862 | AAATCGATGATTAAA GCCG GTG CGGC AGGATTGCATATTGA TERM 505 379438 - 379426 - g 70 -5.5 -4.43501 | AAGGCACGCAGAAAA GCGTC ATC GACAC CATGCAGACCCGCAA prpB 378642 - 379532 + | 2-methylisocitrate lyase prpC 379577 - 380746 + | methylcitrate synthase TERM 506 380982 - 380957 - g 79 -4.5 -5.02074 | overlap 380941 380958 CCAGCCTGTAAAAAA CTGCTGGGGCC AATT GTCCCCGGCAC CGTCGTCCCCAACGG prpD 380780 - 382231 + | 2-methylcitrate dehydratase TERM 507 382841 - 382822 - g 76 -12.8 -2.60079 | opp_overlap 382821 382820 382820, overlap 382818 382819 CGATGCGATAAGTCA GGCGCAGC ATCA GCCGCGCC ACGTTTTACTGGTGG prpE 382271 - 384157 + | propionyl-CoA synthetase TERM 508 384188 - 384157 - f 74 -10.8 -2.75992 | opp_overlap 384168 384169, overlap 384154 384167 384168 GGCGATGGAAGAGTA GGTCGGATAAGGCG CTCG CGCCGCATCCGACA CCGTGCGCAGATGCC TERM 509 384223 - 384167 - f 76 -10.2 -3.30441 | gap 2, opp_overlap 384168 384169 384210, overlap 384157 384154 384168 GAGTAGGTCGGATAA GGCGC-TC-GCGCCGCATCCGACACC GTGCGCA GATGCCTGATGCGACGCTGACGCGTC TTATCATGCCTACAG TERM 510 384220 - 384168 - f 79 -11.9 -2.5805 | opp_overlap 384168 384169 384210, overlap 384157 384154 384167 AGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACC GTGCGCA GATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 511 384317 - 384261 - f 76 -10.2 -3.30124 | gap 2, opp_overlap 384262 384263 384304, overlap 384262 CCGTAGGTCGGATAA GGCGC-TC-GCGCCGCATCCGACACC ATGCGCA GATGCCTGATGCGACGCTGACGCGTC TTATCATGCCTACCC TERM 512 384314 - 384262 - f 79 -11.9 -2.57931 | opp_overlap 384262 384263 384304, overlap 384261 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACC ATGCGCA GATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA codB 384482 - 385741 + | cytosine permease TERM 513 385969 - 385950 - g 72 -10 -3.30635 | CAAACCGCCGGACAA CCGAACTG GAAT CAGTCCGG CACGCTGTTTGAAGG TERM 514 386188 - 386208 + G 74 -6.2 -4.50976 | gap 1, opp_overlap 386205, overlap 386191 TTGATCTGCAAATCG TCGCCTTCC CGCA GGAAGG-GA TTTTGTCGTATCCCA codA 385716 - 387014 + | cytosine deaminase lacA 387797 - 387135 - | galactoside O-acetyltransferase TERM 515 387773 - 387802 + g 76 -12.1 -2.66899 | opp_overlap 387782, overlap 387772 CGCCCTGATATGTTG GTCGGATAAGGCG CTCG CGCCGCATCCGAC ATTGATTGCTTAAGC lacY 389065 - 387812 - | galactoside permease TERM 516 389088 - 389110 + r 82 -9 -4.24569 | opp_overlap 389087 389089, overlap 389084 389089 TTCCTTACGCGAAAT ACGGGCAGAC ATG GCCTGCCCGG TTATTATTATTTTTG TERM 517 389109 - 389089 - R 100 -14.7 -3.38046 | opp_overlap 389088 389084 389089, overlap 389087 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT TERM 518 389089 - 389109 + r 83 -12.5 -3.12301 | opp_overlap 389089 389087, overlap 389088 389084 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT lacZ 392191 - 389117 - | beta-D-galactosidase TERM 519 391633 - 391643 + g 81 -8.2 -4.38154 | AGCGCAGCACCATCA CCGC GAG GCGG TTTTCTCCGGCGTGT TERM 520 392017 - 391959 - G 85 -13.2 -3.13403 | gap 1, opp_overlap 391945 TCGGCGTCAGGAAGA TCGCACTCCAGCCAGCTTTCCGGCACC GCTTCT GGTGCCGGAAACCAGGC-AAAGCGCCA TTCGCCATTCAGGCT lacI 393405 - 392314 - | lac repressor UTI89_C0373 393531 - 393433 - | putative AraC-like transcriptional regulator TERM 521 393707 - 393688 - g 81 -4.9 -5.06103 | overlap 393677 393689 AGAACGGCGAAAAAA TCGCGCG TTCAGG CGCGTGA AGCTCGGGCTGCGGT UTI89_C0374 393598 - 394137 + | hypothetical protein TERM 522 394154 - 394198 + T 71 -8.6 -3.53224 | gap 1 CATAGATAAGCCGTG CAGTGATGCCTGATGCGACGC TTAC GCGTCTTATCAGGCCT-ACGG TTTACGGGCGAAGTG TERM 523 394233 - 394274 + T 80 -8.5 -4.20712 | opp_overlap 394226 394227, overlap 394234 394268 394270 CCGGATAAGGCGTTC ACGCCGCATCCGGCAGCCG TGCG CAGATGCCTGATGCGACGC TTTTCGCGTCTTATC TERM 524 394234 - 394273 + T 81 -12 -3.11704 | opp_overlap 394226 394227, overlap 394233 394268 394270 CGGATAAGGCGTTCA CGCCGCATCCGGCAGCCG TGCG CAGATGCCTGATGCGACG CTTTTCGCGTCTTAT TERM 525 394281 - 394330 + T 85 -11.5 -3.53811 | opp_overlap 394313 394314 394317 394327, overlap 394270 ATGCGACGCTTTTCG CGTCTTATCAGGCCTACGGCTTA CGGG TGAAATGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 526 394348 - 394317 - T 79 -12.2 -2.64472 | opp_overlap 394281, overlap 394314 394313 394327 TACGGGTGAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA GTCGTGCACTATTAT yaiM 395196 - 394363 - | hypothetical protein TERM 527 395154 - 395178 + g 70 -3.5 -4.68424 | overlap 395156 AATGCCGATACACAT TTTGCCAGC CGCCAAA GCTGGCATG TTTTTCAATGAGTTC TERM 528 395156 - 395176 + g 74 -8.3 -3.95214 | overlap 395154 TGCCGATACACATTT TGCCAGC CGCCAAA GCTGGCA TGTTTTTCAATGAGT adhC 396398 - 395289 - | alcohol dehydrogenase class III; formaldehyde dehydrogenase, glutathione-dependent TERM 529 396059 - 396087 + g 93 -13.1 -3.66908 | overlap 396055 GCATCAAGCCTTTGC CCTGCGTTTCGCG AAC CGCGACACACAGG TTGGTTTTGCCAGAA yaiN 396729 - 396433 - | regulator protein FrmR TERM 530 396784 - 396734 - gR 100 -22.4 -3.06302 | gap 1, opp_overlap 396738 396743, overlap 396736 396738 ATCATCTGCACGCAA TATACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTATA TAACACTGGAGAATA TERM 531 396782 - 396736 - gR 100 -20.6 -3.08996 | gap 1, opp_overlap 396738 396743, overlap 396734 396738 CATCTGCACGCAATA TACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTA TATAACACTGGAGAA TERM 532 396738 - 396780 + Gr 100 -18.8 -2.88544 | gap 1, opp_overlap 396738 396736 396734, overlap 396743 TCTGCACGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 533 396780 - 396738 - gR 100 -18.8 -3.10344 | gap 1, opp_overlap 396738 396743, overlap 396736 396734 TCTGCACGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 534 396743 - 396775 + Gr 86 -12.9 -2.88999 | gap 1, opp_overlap 396738 396736 396734, overlap 396738 ACGCAATATACTATA GGGGGGTATGCTAT ATGTCA AT-GCATACCCCCC TATAGTATATAACAC UTI89_C0378 396478 - 396780 + | hypothetical protein yaiO 397670 - 396897 - | hypothetical protein UTI89_C0380 398196 - 397672 - | putative transferase yaiP 399427 - 398231 - | hypothetical protein TERM 535 399102 - 399091 - G 100 -5.8 -5.48825 | CATCACTTAAAAAAA CCTG ATCG CAGG TGGCGTAATTGAGGC TERM 536 399399 - 399380 - G 74 -8.6 -3.93583 | TAACGTACTCAGAAA CCATAGCA ATAT TGCTACGG CCATACATATAAAGA UTI89_C0382 400123 - 399437 - | hypothetical protein TERM 537 400047 - 400062 + g 71 -3.2 -4.86731 | opp_overlap 400056 GGATGCGCGCCAATG GCAAGG ATAC CCTTTC TTTTATTTGCCGAAG UTI89_C0383 400762 - 400568 - | hypothetical protein TERM 538 400827 - 400807 - gH 85 -11.1 -3.72576 | CCGTGGCGTATCAAA CCTCCGCCG AAC CGGCGAAAG TGGCTCAGGCCGACA tauA 400716 - 401678 + | taurine transporter substrate binding subunit TERM 539 402096 - 402137 + G 84 -10.8 -3.71848 | GGTGGTCAACGTCAG CGGGTGGGGATTGCCCGC GCGTTG GCGGCAAATCCCCAGCTG TTATTACTCGACGAA tauB 401691 - 402458 + | taurine transporter ATP-binding subunit TERM 540 403183 - 403213 + G 88 -8.2 -4.65933 | GACTGACGTGGTGCT GGCGGGGATCGCGG TGA TTGCGATTATCGCC TTTCTTTTAGAACTG tauC 402455 - 403282 + | taurine transporter subunit TERM 541 403454 - 403466 + G 81 -9.1 -4.08767 | CGCAGCAGCAACGCG CGCTG GCC CAGCG TTTTGGCGAGCTGCA tauD 403279 - 404130 + | taurine dioxygenase TERM 542 404160 - 404139 - T 100 -14.5 -3.60792 | GGGGTAAGGGGGAAA TGCCGGGTT GGAT AACCCGGCA TAATGATCATTAACG hemB 405177 - 404170 - | delta-aminolevulinic acid dehydratase UTI89_C0389 405670 - 408657 + | putative structural protein TERM 543 408725 - 408696 - f 100 -18.1 -3.78409 | opp_overlap 408699, overlap 408699 GTAATTTAATCTAAA TAATGCCCGTCAA GGAT TTGACGGGCATTA CTGCAAAGGACGCGC TERM 544 408699 - 408722 + G 100 -15.4 -3.14132 | opp_overlap 408699 408696 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 545 408722 - 408699 - g 100 -15.4 -4.01381 | opp_overlap 408699, overlap 408696 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 546 409357 - 409321 - g 82 -11.8 -3.55866 | gap 1, opp_overlap 409333, overlap 409325 CTATATCGAAATGAA TAAAGGCAAACTGGTCG CTAT CAACC-GTTTGCCTTCA GAGTATTAATCAGGA TERM 547 409353 - 409325 - g 90 -10.4 -4.40298 | gap 1, opp_overlap 409333, overlap 409321 ATCGAAATGAATAAA GGCAAACTGGTCG CTAT CAACC-GTTTGCC TTCAGAGTATTAATC yaiV 408698 - 409366 + | putative DNA-binding transcriptional regulator TERM 548 409374 - 409401 + T 79 -11.4 -3.07816 | gap 1 AGTATTAATCAGGAT GCGGGGAT-AACC AAC GGTTTATTCCCGC TTAGCTCGGTCACCA yaiH 410524 - 409367 - | beta-lactamase/D-alanine carboxypeptidase TERM 549 409988 - 410002 + g 70 -4.9 -4.55128 | overlap 409979 409978 GGAGTACGCGGCCTG GCTGC CCGGC GCGGC TTTTAGTTTGGCAGT UTI89_C0392 410662 - 410856 + | hypothetical protein TERM 550 411748 - 411776 + G 70 -4.4 -4.57569 | gap 1, opp_overlap 411739 TGAAGACGATGCCAC GCGCGCGACGCCG CCTA CGGTA-CGCGAGC TTTTTAGCGCCGTAC sbmA 410870 - 412096 + | transport protein yaiW 412109 - 413203 + | hypothetical protein yaiY 413570 - 413262 - | hypothetical protein TERM 551 413512 - 413484 - Gf 77 -8.2 -4.13711 | gap 1, overlap 413487 GCAAAACAGCACAAA CAACGCATAGGCA ATAT TGCC-AGGCGTTG AAGATGCATTGCGAT UTI89_C0396 413500 - 413634 + | hypothetical protein yaiZ 413698 - 414042 + | hypothetical protein TERM 552 414057 - 414033 - T 84 -8.6 -4.42851 | opp_overlap 414033 TGAAGAAACTGAAAA CGCCCAATAA GAATA TTACCGGGCG TTTGAATATTACATT ddl 415160 - 414066 - | D-alanyl-alanine synthetase A TERM 553 414265 - 414252 - G 70 -4.5 -4.56597 | CTCTGGGGTTAAAAA CACGT CTAC ACGCG CCATGCCTGCGCATC TERM 554 414866 - 414885 + g 70 -5.6 -4.431 | opp_overlap 414862, overlap 414868 GGAAAATGACATCCA CCGTCGGC AACG GCTGACCG TTTTGTGCGTCGATA UTI89_C0399 415238 - 415360 + | hypothetical protein UTI89_C0400 415738 - 415475 - | hypothetical protein yaiB 415623 - 415883 + | hypothetical protein TERM 555 415926 - 415940 + G 84 -4.2 -5.21459 | overlap 415917 415928 AAAGTTGTCACGGCC GAGACT TAT AGTCGC TTTGTTTTTATTTTT TERM 556 416227 - 416259 + G 90 -6.9 -5.04987 | GACTCGGAAATTACT GCCGCACGCAATT ATGCCGA AGGTGCGGGCGGC TTTTTTAAAGGTATT TERM 557 416338 - 416327 - g 100 -7.2 -5.7946 | CGCTGAATAAAAAAA CCGG CAAA CCGG ACTACGTCACCGACT phoA 415915 - 417399 + | alkaline phosphatase TERM 558 417436 - 417402 - f 80 -6.3 -4.86731 | gap 1, opp_overlap 417404 417405 417435, overlap 417397 417403 417404 GGGGCTGAAATAAAA CCGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-GT TTTTTTGCTGTTAGC TERM 559 417435 - 417403 - f 75 -9.8 -3.51557 | gap 1, opp_overlap 417404 417405, overlap 417402 417397 417404 GGGCTGAAATAAAAC CGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-G TTTTTTTGCTGTTAG TERM 560 417435 - 417404 - f 71 -10 -2.70452 | opp_overlap 417404 417405, overlap 417403 417402 417397 GGCTGAAATAAAACC GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG TTTTTTTGCTGTTAG TERM 561 417404 - 417435 + F 100 -14.4 -5.63374 | opp_overlap 417403 417404 417402 417397, overlap 417405 GGCTGAAATAAAACC GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG TTTTTTTGCTGTTAG TERM 562 417405 - 417434 + F 100 -17.9 -3.96398 | opp_overlap 417403 417404 417402 417397, overlap 417404 GCTGAAATAAAACCG CGCCCGGCAGTGA ATTT TCGCTGCCGGGTG GTTTTTTTGCTGTTA psiF 417500 - 417838 + | hypothetical protein TERM 563 417852 - 417885 + F 70 -7.4 -3.86944 | GATACCTGATAGTGC TAACGGGTGAGCTA CGAAAA TGGCTCACCCGAAA TTTCATACTTCTGCC TERM 564 418341 - 418363 + G 86 -12.7 -3.5241 | overlap 418349 418354 418356 TATGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 565 418349 - 418365 + G 81 -10.1 -3.87373 | overlap 418341 418354 418356 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG TERM 566 419063 - 419023 - g 95 -9.9 -4.65182 | gap 3 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC AAAAGCCATCAGGAT yaiC 417940 - 419055 + | diguanylate cyclase AdrA proC 419881 - 419072 - | pyrroline-5-carboxylate reductase yaiI 419881 - 420459 + | hypothetical protein TERM 567 420525 - 420541 + F 100 -6.6 -5.64421 | GGGATGTATTGAGAT TTCCAC CTTAA GTGGAA TTTTTTCTTTACAAT aroL 420642 - 421166 + | shikimate kinase II UTI89_C0408 421488 - 421156 - | hypothetical protein yaiA 421216 - 421407 + | hypothetical protein aroM 421665 - 422342 + | hypothetical protein yaiE 422414 - 422698 + | hypothetical protein TERM 568 422704 - 422728 + TF 80 -6.3 -4.8667 | overlap 422705 422720 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATGTC TERM 569 422705 - 422727 + TF 75 -9.8 -3.51279 | overlap 422704 422720 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATGT TERM 570 422720 - 422748 + TF 81 -11.1 -3.56092 | overlap 422705 422704 GCCTTCCCCTTGAAC GGGAGGGCATTTT TCT GAAATGTCCTCTC TTTAACCCATAATAA UTI89_C0412 422957 - 422802 - | hypothetical protein ykiA 422906 - 423187 + | hypothetical protein rdgC 424256 - 423345 - | recombination associated protein TERM 571 423806 - 423818 + g 77 -3.3 -5.03314 | overlap 423791 TACGCAGCAGTGCCA GCGTA TCT TCCGC TTTTTTGGCGCTGGC TERM 572 425263 - 425216 - g 77 -9.8 -3.69354 | gap 1, opp_overlap 425211 425245 425246 GCGGAGAATGTGAAA CGCCG-GTACGCAAGGCGAAACA TGG TGATTCGAGCGGCGTACGCGGCG CTGCATGGTTATGGC yajF 424381 - 425289 + | fructokinase araJ 426826 - 425558 - | protein AraJ TERM 573 426276 - 426266 - G 74 -2.4 -5.14163 | AGCGATCAACAAAAA GGTG TAG CGCC AGCTAAATTCCTGAC TERM 574 426580 - 426565 - G 74 -3.2 -5.00884 | overlap 426576 AGCGGCTGGAAAAAA GCGC GATTATAG GCGC ACCGACCACCACCCC sbcC 430011 - 426868 - | exonuclease subunit SbcC TERM 575 427218 - 427232 + g 73 -11.4 -2.77962 | overlap 427217 CAACAACCTCAACTT CCAGCG CTT CGCTGG CTTTGCGCTGTAACA TERM 576 428522 - 428537 + g 85 -10.4 -4.27192 | GCTTGTAACTGCGCG CGCTGG GCTT CCAGCG TTTTAATGCGAGTTT TERM 577 429165 - 429186 + g 87 -5 -5.29445 | GTTGTGCCAGACTGA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 431210 - 430008 - | exonuclease subunit SbcD TERM 578 430617 - 430633 + gH 70 -6.5 -4.25104 | opp_overlap 430617 430616 430612, overlap 430595 CGTGCCAATATAAAT GTCACGC ACG GCGTCAC TTTTACTGGCACCCA TERM 579 430749 - 430763 + gH 75 -5.7 -4.67011 | overlap 430749 ATCAGTAATAGCCGC CAGCA AATGC TGCTG TTTTTCAATACCGTT UTI89_C0419 431196 - 431327 + | hypothetical protein TERM 580 432056 - 432070 + G 74 -6.4 -4.57341 | GGTGCAGACCGTGCG CGGTAC AGG GTATCG TTTTTCAACCCGCTT phoB 431400 - 432089 + | transcriptional regulator PhoB TERM 581 432198 - 432224 + G 82 -2.8 -5.28481 | overlap 432196 432212 GAGCTGCTACTTTGC TGCCTCCCGGCT TTC ATCCTGGGTGCA TTTTTTGGTTACCTG phoR 432147 - 433442 + | phosphate regulon sensor protein TERM 582 433469 - 433490 + T 100 -13.1 -4.88918 | opp_overlap 433472 CATCTTTTATTGCCA TAAGCCAGC CGAT GCTGGCTTA TTTTCTTTGCAGTCG TERM 583 433487 - 433472 - T 76 -10.4 -3.31144 | opp_overlap 433469 CTTTTATTGCCATAA GCCAGC CGAT GCTGGC TTATTTTCTTTGCAG UTI89_C0422 433804 - 433655 - | hypothetical protein TERM 584 434122 - 434134 + G 72 -6.9 -4.18018 | ACAGTTTGTTACCTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 433849 - 435168 + | branched-chain amino acid transport system II carrier protein TERM 585 435190 - 435213 + F 100 -15.3 -5.64304 | opp_overlap 435193 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 435241 - 436617 + | putative proline-specific permease TERM 586 436634 - 436662 + F 89 -14.6 -3.03338 | overlap 436624 CCTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT malZ 436773 - 438590 + | maltodextrin glucosidase yajB 439176 - 438595 - | acyl carrier protein phosphodiesterase TERM 587 439673 - 439662 - g 77 -5.8 -4.7254 | ATGCTCGACGAAAAA CGCA TTCT TGCG CATATTCGCGCCTCG TERM 588 439708 - 439692 - g 74 -10.1 -3.53091 | overlap 439701 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGCTGCTGGG queA 439395 - 440465 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 589 440583 - 440599 + G 70 -5.1 -4.33785 | overlap 440580 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 440520 - 441647 + | queuine tRNA-ribosyltransferase TERM 590 441839 - 441822 - g 93 -6.3 -5.23765 | gap 1 CAAAGAACACAAAAA GCTGATGG ACT CCATC-GC TAAAGGTGATGAAGT yajC 441670 - 442002 + | preprotein translocase subunit YajC TERM 591 442591 - 442545 - gf 73 -3.8 -4.86731 | opp_overlap 442585, overlap 442548 442549 442551 CGTTCGTAAAGAAAA CAACTACG-GCCTGAGCATCAC TTTCC GCGATGCTAAAGCTCGT-GATG AAGCCATTGCGTATC TERM 592 443124 - 443109 - gf 73 -9 -3.54029 | CTTCACCAAGGACAA CATCGG CAAA CCGATG GCAACCCTATTTGTG secD 442030 - 443877 + | preprotein translocase subunit SecD secF 443843 - 444859 + | preprotein translocase subunit SecF TERM 593 444903 - 444884 - f 74 -7.8 -4.11394 | opp_overlap 444884 AGCTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAA TERM 594 444884 - 444903 + F 100 -10 -5.90981 | opp_overlap 444884 AGCTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAA yajD 444920 - 445336 + | hypothetical protein TERM 595 445364 - 445344 - T 100 -11.2 -5.3236 | opp_overlap 445344 AGAAGTGATAAAAAA TGCCGGAT ATGAA ATCCGGCA TTCTCACAATTAGAA TERM 596 445344 - 445364 + T 83 -11.2 -3.33261 | opp_overlap 445344 AGAAGTGATAAAAAA TGCCGGAT ATGAA ATCCGGCA TTCTCACAATTAGAA tsx 446306 - 445374 - | nucleoside channel; receptor of phage T6 and colicin K yajI 447095 - 446556 - | hypothetical protein TERM 597 446891 - 446934 + g 76 -7.4 -4.29396 | opp_overlap 446907, overlap 446889 446923 446924 CTGGTGTTTTTGCTC CAGGCAGAAGGTAAACCCCA CTGC TGGATTTTGCATTCAGCCTG TTTTGCTGAGTGATT TERM 598 446988 - 447003 + g 71 -9 -3.53018 | overlap 446972 446986 CGTCATCTCCTGGTT CAGCGT GCTG ACGCTG TGTTTCATCTGTCGC ybaD 447246 - 447695 + | transcriptional regulator NrdR ribD 447699 - 448802 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 599 449315 - 449299 - g 70 -6.5 -4.17132 | overlap 449300 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACCGCGCTTGAAAT ribH 448891 - 449361 + | riboflavin synthase subunit beta UTI89_C0438 449884 - 449351 - | hypothetical protein TERM 600 449515 - 449504 - Gg 70 -5.8 -4.23723 | opp_overlap 449492 449489, overlap 449494 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 601 449654 - 449627 - Gg 81 -6.2 -4.87665 | gap 1, opp_overlap 449627, overlap 449628 449630 GGCCAGGTAGAAAAA GC-AGTACTGCGC ATT GCGCTGTACGAGC TGTCTAAACGTAGCG TERM 602 449650 - 449630 - Gg 76 -11.1 -3.32986 | opp_overlap 449627, overlap 449628 449627 CAGGTAGAAAAAGCA GTACTGCGC ATT GCGCTGTAC GAGCTGTCTAAACGT nusB 449381 - 449800 + | transcription antitermination protein NusB TERM 603 449807 - 449847 + gF 100 -9.1 -5.43553 | gap 2, opp_overlap 449826 AAAAAGTAATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCGCGA-TC-GCCGGCC TTTTCTTTTTTACCT TERM 604 450584 - 450597 + GH 70 -4.5 -4.47328 | overlap 450585 GCGCACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT thiL 449878 - 450855 + | thiamine monophosphate kinase pgpA 450833 - 451351 + | phosphatidylglycerophosphatase A yajO 452379 - 451405 - | oxidoreductase YajO TERM 605 451853 - 451863 + g 86 -6.8 -4.98255 | CTGACAAACTGCGCC CAGC CGT GCTG TTTTTGTAGTTCCAG dxs 454296 - 452434 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 606 452607 - 452620 + g 78 -5.2 -4.78237 | CGCCGCTACCTGCGC CGCC CATAAT GGCG TTTTCTTCTACGGTG TERM 607 452810 - 452823 + g 72 -4.5 -4.62336 | overlap 452811 CGCTTCACAATGCCT TTGCC AATT GGCAG TTTTTCCAGTGGCGT ispA 455220 - 454321 - | geranyltranstransferase xseB 455462 - 455220 - | exodeoxyribonuclease VII small subunit TERM 608 455851 - 455841 - g 77 -6.8 -4.55826 | opp_overlap 455840, overlap 455844 CGCAAAAGATGAAAA CCAG CGT CTGG CTATTCGCGACGCCC yajK 455668 - 457116 + | thiamine biosynthesis protein ThiI TERM 609 457130 - 457153 + T 100 -15.4 -3.55444 | opp_overlap 457119 AATATGTGGTTGTAA CGTCGCATCT GGTC AGATGCGACG TTTACCGCATCCGAC thiJ 457766 - 457170 - | hypothetical protein TERM 610 457635 - 457667 + gT 77 -9.1 -3.72576 | opp_overlap 457628 GCAGGTAATCGCCAG GTTACCATCGCTGGC GAC GCTGGCAGTGGTGAC TTTGATACCGCCGCG apbA 458634 - 457723 - | 2-dehydropantoate 2-reductase TERM 611 458728 - 458674 - g 88 -12.5 -3.61398 | gap 2, opp_overlap 458671 458725, overlap 458675 CCGGGTGTTCAATAA GGC-TATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATACGTC CTGGTGCGGGACTGT TERM 612 458725 - 458675 - g 85 -13.7 -2.76696 | opp_overlap 458671, overlap 458674 CGGGTGTTCAATAAG GCTATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATA-C GTCCTGGTGCGGGAC yajQ 458634 - 459293 + | nucleotide-binding protein yajR 460983 - 459421 - | transport protein YajR TERM 613 460615 - 460599 - GT 78 -6.5 -4.67234 | overlap 460600 ACGGAATCTGAAAAA CGGCCTG AGT CAGACCA TAAATACCAATGGCA TERM 614 460900 - 460913 + gT 85 -8.1 -4.65895 | opp_overlap 460900 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAACTGAGAGG TERM 615 460913 - 460900 - GT 100 -8.1 -5.4756 | opp_overlap 460900 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAACTGAGAGG cyoE 461869 - 460934 - | protoheme IX farnesyltransferase TERM 616 461745 - 461725 - GRH 75 -9.7 -3.45386 | overlap 461713 ACAGGGGATAATCAA TGCTGCCCT TTG AGGCCAGCA AGAATCCCCCAATCA cyoD 462165 - 461836 - | cytochrome o ubiquinol oxidase subunit IV UTI89_C0453 461858 - 462115 + | hypothetical protein cyoC 462779 - 462165 - | cytochrome o ubiquinol oxidase subunit III TERM 617 462476 - 462493 + g 100 -8.4 -5.18715 | ACCATGTCAACGCCA GCCAGG AGACAA CCTGGC TTTTGTTGTTTTTGT cyoB 464760 - 462769 - | cytochrome o ubiquinol oxidase subunit I TERM 618 462806 - 462833 + g 76 -9.2 -3.85698 | opp_overlap 462813, overlap 462814 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 619 462814 - 462825 + g 81 -5.8 -4.84529 | opp_overlap 462813, overlap 462806 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC TERM 620 462987 - 462997 + g 81 -4.6 -5.07567 | opp_overlap 462971 462972 CCGCAATGACGATAC CGGC ACC GCTG TTTTTTGGCATATGA cyoA 465729 - 464782 - | cytochrome o ubiquinol oxidase subunit II TERM 621 465988 - 465968 - R 82 -4.9 -5.26907 | opp_overlap 465971 CAATATAAAATAAAA CAATTATTT AAC AAATAATTA TCATTGAGGTGACAA TERM 622 466132 - 466178 + r 73 -10.5 -3.0644 | overlap 466132 AAGCGATGCTGATGT TTATTTAGCCGTAATAATTAC GGCGA GTGATTACTACAGCTAAATAA TATTACAGATTACGT ampG 467663 - 466188 - | muropeptide transporter TERM 623 467324 - 467311 - G 75 -4.5 -4.81551 | GAGGCAGAGCAAAAA GCGAT CACC ACCGC CAGTGCCGCCATCCA TERM 624 467502 - 467486 - G 71 -2.9 -4.76892 | overlap 467487 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGAGAGAAGAAACCA yajG 468285 - 467707 - | hypothetical protein UTI89_C0459 468466 - 468347 - | hypothetical protein UTI89_C0461 469256 - 468834 - | hypothetical protein bolA 468590 - 468907 + | transcriptional regulator BolA TERM 625 468961 - 468984 + GgTF 91 -9.6 -4.59984 | opp_overlap 468954 468966, overlap 468966 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 626 468979 - 468966 - GgTf 95 -9.5 -4.74132 | opp_overlap 468966 468961 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 627 468966 - 468979 + GgTF 100 -9.5 -5.23292 | opp_overlap 468966, overlap 468961 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 628 469066 - 469051 - GgTf 90 -6.8 -5.055 | overlap 469053 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 629 469064 - 469053 - GgTf 72 -7.2 -4.15235 | overlap 469051 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG UTI89_C0462 468841 - 469104 + | hypothetical protein UTI89_C0464 470561 - 469260 - | hypothetical protein TERM 630 469420 - 469472 + Gg 72 -9.8 -3.34013 | gap 1 ATATCGTTGCTCAGC GTTATGGCGCGTCTGTACG-CCAGG ACGT CCTGGGCGACCTGATGAGCCGTAAC TTCATTGACGCCATC tig 469251 - 470540 + | trigger factor TERM 631 470584 - 470607 + FH 100 -12.4 -5.9873 | opp_overlap 470584 470583 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA clpP 470795 - 471418 + | ATP-dependent Clp protease proteolytic subunit clpX 471544 - 472818 + | ATP-dependent protease ATP-binding subunit TERM 632 472847 - 472875 + F 82 -6.7 -4.88711 | opp_overlap 472852, overlap 472852 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 633 472870 - 472852 - f 91 -8.8 -4.88407 | opp_overlap 472847 472852 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 634 472852 - 472870 + F 90 -11 -4.3623 | opp_overlap 472852, overlap 472847 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 635 473952 - 473939 - g 77 -3.1 -5.10029 | gap 1, overlap 473929 473941 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 636 473957 - 473941 - g 82 -9.4 -4.17355 | overlap 473929 473939 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 637 474299 - 474288 - g 70 -4.4 -4.45485 | opp_overlap 474281 ATGAGATCGACAAAA TGTC TTCT GACA TGCGTGGCGATCCGG TERM 638 475001 - 474989 - g 75 -5.5 -4.72986 | GATTTTTACGAAAAA CGTGA CAT CCACG TCCACGTACCGGAAG lon 472961 - 475360 + | DNA-binding ATP-dependent protease La TERM 639 475425 - 475390 - f 77 -4.6 -5.14163 | opp_overlap 475393, overlap 475392 475393 ATGCACTAATAAAAA CAGGGCTGGCAGGC TAATTCGG GCTTGCCAGCCTTT TTTTGTCTCGCTAAG TERM 640 475423 - 475392 - f 74 -7.2 -4.19587 | opp_overlap 475393, overlap 475390 475393 GCACTAATAAAAACA GGGCTGGCAGGC TAATTCGG GCTTGCCAGCCT TTTTTTGTCTCGCTA TERM 641 475422 - 475393 - f 76 -10.7 -3.10668 | opp_overlap 475393, overlap 475392 475390 CACTAATAAAAACAG GGCTGGCAGGC TAATTCGG GCTTGCCAGCC TTTTTTTGTCTCGCT TERM 642 475393 - 475422 + F 100 -13.6 -5.72616 | opp_overlap 475392 475390 475393 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT hupB 475569 - 475841 + | transcriptional regulator HU subunit beta TERM 643 475877 - 475896 + F 100 -10 -5.7827 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT TERM 644 477822 - 477791 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ybaU 476033 - 477904 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 645 477947 - 477974 + F 75 -10.6 -2.93447 | opp_overlap 477948 477953, overlap 477953 TTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 646 477973 - 477948 - f 89 -11.9 -3.63515 | opp_overlap 477947 477953, overlap 477953 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 647 477953 - 477968 + F 79 -8.2 -4.39571 | opp_overlap 477953 477948, overlap 477947 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 648 477968 - 477953 - f 81 -6 -4.89477 | opp_overlap 477947 477953, overlap 477948 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA ybaV 478055 - 478426 + | hypothetical protein TERM 649 478485 - 478463 - f 76 -10.7 -3.12351 | opp_overlap 478458 478463 478465 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAGT TERM 650 478463 - 478485 + F 75 -10.7 -2.96452 | opp_overlap 478463, overlap 478458 478465 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAGT ybaW 478532 - 478930 + | hypothetical protein ybaX 479677 - 478982 - | queuosine biosynthesis protein QueC TERM 651 479306 - 479332 + g 82 -9.4 -4.21194 | GGAGAAATCCGTTTC GCAGACGCCG GTAATTA CGGCTTCTGC TTTTACCTGATACGC TERM 652 479716 - 479704 - R 87 -6.3 -5.29445 | CTTGAACAATAAAAA CGTTA TGG TAACG CCTGCGATTAACCCG ybaE 481457 - 479742 - | hypothetical protein TERM 653 480090 - 480108 + g 79 -2.2 -5.1925 | overlap 480091 480092 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 654 481031 - 480990 - G 74 -8.1 -4.09685 | gap 2, opp_overlap 481021, overlap 480992 GGTCAGGCCGGAAAA TATCTGCCCGGCCAGATGC TGCTCG GCA-C-GGCCGGGCAAAAA GCCCGGTTGTAGCGG TERM 655 481029 - 480992 - G 81 -10.7 -3.64716 | gap 2, opp_overlap 481021, overlap 480990 TCAGGCCGGAAAATA TCTGCCCGGCCAGATGC TGCTCG GCA-C-GGCCGGGCAAA AAGCCCGGTTGTAGC TERM 656 481021 - 481037 + g 76 -10.8 -3.33261 | opp_overlap 480992 480990 481032 481034 TGCTGCTCGGCACGG CCGGGC AAAAA GCCCGG TTGTAGCGGTTCGAG TERM 657 481965 - 481954 - g 95 -5.8 -5.44119 | overlap 481955 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 481530 - 482360 + | hypothetical protein TERM 658 482378 - 482393 + F 100 -11.8 -5.86332 | AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTTGCGTTGA TERM 659 482500 - 482486 - g 72 -4.3 -4.6008 | AAAATAGAATTAAAA GAGAA AAAAA TTCTC TGTGGAAGGGCTATG TERM 660 482704 - 482691 - g 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG ybaO 482405 - 482971 + | transcriptional regulator YbaO mdlA 483001 - 484773 + | putative multidrug transporter membrane\ATP-binding components mdlB 484652 - 486547 + | putative multidrug transporter membrane\ATP-binding components TERM 661 486584 - 486607 + F 90 -8.9 -4.68645 | opp_overlap 486584 486579 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC glnK 486728 - 487066 + | nitrogen regulatory protein P-II 2 TERM 662 487238 - 487251 + G 72 -5.9 -4.3739 | overlap 487246 TGTTTATGACCGTTC CGGGG ATTG CCCTG TTTTATGGAGGGCTG TERM 663 487537 - 487549 + G 76 -4.1 -4.93898 | opp_overlap 487530, overlap 487530 GAACGAATCCGCTTC TCAGC TGT GTTGA TTTTTGTGGTGGTAT amtB 487096 - 488382 + | ammonium transporter TERM 664 488399 - 488425 + T 100 -7.3 -5.68023 | gap 1, opp_overlap 488399 488401, overlap 488401 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 665 488425 - 488399 - T 93 -9.5 -5.07053 | gap 1, opp_overlap 488399 488401, overlap 488401 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 666 488423 - 488401 - T 84 -9.9 -4.15748 | gap 1, opp_overlap 488399 488401, overlap 488399 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT TERM 667 488401 - 488423 + T 89 -9.9 -4.46828 | gap 1, opp_overlap 488401 488399, overlap 488399 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT tesB 489375 - 488431 - | acyl-CoA thioesterase II TERM 668 489321 - 489311 - G 72 -6.8 -4.24342 | overlap 489312 CTCTCCAGTAACAAA GCTG CCG CAGC AAGCCAAAGTGAGTT ybaY 489509 - 490081 + | hypothetical protein TERM 669 490116 - 490087 - T 70 -9.3 -3.23979 | opp_overlap 490088 490092, overlap 490082 490092 GCAATATTAAGCGAA GTTAACCCTCTCC GCCC GGAGAGGGTTAGT AGTTCCAGCGATAAA TERM 670 490088 - 490115 + T 89 -15 -2.71364 | opp_overlap 490082 490087 490092, overlap 490092 CAATATTAAGCGAAG TTAACCCTCTCC GCCC GGAGAGGGTTAG TAGTTCCAGCGATAA TERM 671 490092 - 490111 + T 93 -13.6 -3.27298 | opp_overlap 490082 490087 490092, overlap 490088 ATTAAGCGAAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG TERM 672 490111 - 490092 - T 93 -13.6 -3.21258 | opp_overlap 490092 490088, overlap 490082 490087 ATTAAGCGAAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG ybaZ 490522 - 490112 - | hypothetical protein TERM 673 490505 - 490495 - G 72 -6.8 -4.16016 | GCATTGCGCAAGAAA CCAG CAT CTGG CACGCAATGGGTTGC ybaA 490802 - 491155 + | hypothetical protein ylaB 492753 - 491197 - | hypothetical protein TERM 674 491615 - 491633 + g 80 -5.2 -5.02074 | TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA TERM 675 492873 - 492896 + r 86 -13.2 -2.88663 | ATCGTTGTCATTTGA CCAGGCGTAG AGCT TTACGCCTGG TATGTACCCCTAACT ylaC 493420 - 492911 - | hypothetical protein TERM 676 493022 - 493008 - G 77 -11.4 -3.13403 | opp_overlap 492999, overlap 493006 TGTTCTTTATGAACA TCCGCG ACA CGCGGA GAGTTCAGGATGGCT maa 494048 - 493497 - | maltose O-acetyltransferase hha 494452 - 494222 - | hemolysin expression-modulating protein ybaJ 494840 - 494466 - | hypothetical protein TERM 677 495365 - 495350 - R 100 -11.8 -5.28176 | opp_overlap 495350 GTTATGTATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT TERM 678 495350 - 495365 + r 83 -11.8 -3.27476 | opp_overlap 495350 GTTATGTATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT acrB 498534 - 495385 - | acridine efflux pump TERM 679 496705 - 496726 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 680 497494 - 497507 + g 70 -3.8 -4.62872 | overlap 497488 GAACACGAGGATGAT CGCT TCGACC AGCG TTTTTACCACTTCGT TERM 681 498408 - 498447 + g 100 -15.8 -3.57144 | AGGCGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 499786 - 498557 - | acriflavine resistance protein A precursor TERM 682 499721 - 499739 + g 93 -6 -5.17744 | opp_overlap 499717 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 499892 - 500539 + | DNA-binding transcriptional repressor AcrR TERM 683 500962 - 500949 - g 70 -3.7 -4.62783 | overlap 500932 CAGCTACGGCAAAAA GTCGC TGAA GCGCC GGAAAAAATGCGCCA TERM 684 501483 - 501469 - g 79 -4.2 -5.15969 | overlap 501447 CTTTAACCGAAAAAA CGGC GCAGGAA GCCG TCTCCCCGGATGAAG TERM 685 504016 - 504000 - g 78 -9.3 -3.98236 | AAACGCGACTACAAA GGCGACG ATC CGACGCC AGCGGTAGGGTAATA kefA 500667 - 504029 + | potassium efflux protein KefA ybaM 504402 - 504241 - | hypothetical protein priC 504943 - 504416 - | primosomal replication protein N'' ybaN 505013 - 505390 + | hypothetical protein apt 505489 - 506094 + | adenine phosphoribosyltransferase TERM 686 506146 - 506170 + F 71 -9.9 -3.09492 | overlap 506146 506148 506164 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 687 506405 - 506377 - g 72 -5.2 -4.56597 | gap 1, opp_overlap 506346 GTGGCGTCGGAAAAA CCTCTATCGCCCG ACTG CTGGCGA-AGGGG CTAAACTGCGAAACT TERM 688 507465 - 507445 - g 74 -10.4 -3.53224 | overlap 507446 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 689 507546 - 507519 - g 76 -10.5 -3.36112 | gap 1 GCAAAAAAGAGTGAA CCGGCAGC-CGC TACCC GCGCGCGGCCGG TGAATAACGCTGCGC TERM 690 507703 - 507687 - g 75 -4.3 -4.7497 | overlap 507690 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTGAAAAA TERM 691 507700 - 507690 - g 77 -6.8 -4.4831 | overlap 507687 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTGAA TERM 692 507755 - 507739 - g 93 -6.5 -5.27779 | TGGAACATGAAAAAA CGCCG GAACTGG CGGCG AAGCTGGCGGCAGAA TERM 693 507900 - 507858 - g 71 -9.1 -3.56594 | opp_overlap 507867 507873 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 694 508070 - 508053 - g 95 -6.9 -5.17744 | opp_overlap 508050 508053 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 506223 - 508154 + | DNA polymerase III subunits gamma and tau TERM 695 508156 - 508172 + TF 78 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC UTI89_C0498 508560 - 508183 - | hypothetical protein TERM 696 508280 - 508268 - Gg 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA ybaB 508192 - 508536 + | hypothetical protein TERM 697 508616 - 508572 - gH 76 -10.6 -3.07622 | gap 1, overlap 508562 508575 ACACAGCTTATGGAA GCACTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 698 508613 - 508575 - gH 85 -13.1 -2.75382 | gap 1, overlap 508572 CAGCTTATGGAAGCA CTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 699 508956 - 508945 - gH 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAACC recR 508536 - 509141 + | recombination protein RecR TERM 700 509141 - 509176 + FH 72 -10.4 -2.90804 | opp_overlap 509132 509147, overlap 509140 509150 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG ATCA CCTGCTCTCGCTTGAA ATTATTCTCCCTTGT TERM 701 509170 - 509147 - fH 100 -16.8 -3.90112 | opp_overlap 509141 509140 509150, overlap 509132 TCGTTTTTAAGCAAA CGAGAGCAGG ATCA CCTGCTCTCG CTTGAAATTATTCTC TERM 702 509150 - 509167 + FH 77 -11.3 -2.55818 | opp_overlap 509147, overlap 509141 509140 TTTTTAAGCAAACGA GAGCAGG ATCA CCTGCTC TCGCTTGAAATTATT TERM 703 509712 - 509692 - g 100 -10.5 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAAC GGC GTCTTCTGG GAATCGGCTGGCGAA TERM 704 510377 - 510361 - g 81 -7.3 -4.60487 | overlap 510363 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 705 510375 - 510363 - g 72 -7.7 -3.91506 | overlap 510361 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 509251 - 511125 + | heat shock protein 90 TERM 706 511131 - 511158 + F 100 -15.7 -5.62288 | GGTTTCCTGATGTCA TGCCGGATGAC CTTCGT GTCATCCGGCA TTTTTCTTTTCTTCA adk 511246 - 511950 + | adenylate kinase TERM 707 513012 - 512967 - g 76 -4.1 -5.00616 | overlap 512969 512973 GCGGGCGGGAAAAAA TATGAATATATTCCGGCGC TTAATGCC ACGCCGGAACATATCGAAA TGATGGCTAATCTTG TERM 708 513010 - 512969 - g 70 -6.7 -4.13561 | overlap 512967 512973 GGGCGGGAAAAAATA TGAATATATTCCGGCGC TTAATGCC ACGCCGGAACATATCGA AATGATGGCTAATCT TERM 709 513006 - 512973 - g 77 -9.7 -3.66995 | overlap 512969 512967 GGGAAAAAATATGAA TATATTCCGGCGC TTAATGCC ACGCCGGAACATA TCGAAATGATGGCTA hemH 512082 - 513044 + | ferrochelatase ybaC 514000 - 513041 - | acetyl esterase TERM 710 513069 - 513093 + g 70 -5.7 -4.3129 | gap 1, opp_overlap 513066, overlap 513067 GTAAAGAACTGAGCG CCGTCG-CGA AGAGCC TCGTCGGCGG TTTTCATCATCCGTG TERM 711 515083 - 515062 - g 78 -7.9 -4.37198 | opp_overlap 515062 515069, overlap 515066 AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG TGCTATAGCGGAATT gsk 514152 - 515456 + | inosine-guanosine kinase TERM 712 515474 - 515505 + T 84 -8.6 -4.3586 | opp_overlap 515484 515485, overlap 515475 515484 515485 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTTGCTCTCAATGC TERM 713 515475 - 515504 + T 83 -12.1 -3.21034 | opp_overlap 515484 515485, overlap 515474 515484 515485 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTTGCTCTCAATG ybaL 517262 - 515586 - | putative cation:proton antiport protein TERM 714 517497 - 517465 - R 86 -10.6 -4.13945 | opp_overlap 517455, overlap 517468 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 715 517494 - 517468 - R 93 -15.3 -3.09831 | opp_overlap 517455, overlap 517465 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT fsr 518721 - 517501 - | fosmidomycin resistance protein TERM 716 518687 - 518702 + g 72 -6.8 -4.23045 | gap 1, overlap 518686 518687 GTTGACGCAGCCGCG CCC-GCC ACA GGCTGGG TTTGTTCACTCATTG TERM 717 520442 - 520463 + G 70 -10.1 -3.14132 | opp_overlap 520411 AACTTCAATGCCACC GGCGGGGAT GGCT ATCCGCGCC TTGATAACAAACCGG ushA 518939 - 520591 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 718 520601 - 520627 + T 100 -15.2 -3.9777 | opp_overlap 520596 520597 520617, overlap 520592 CAGTAATGAACCCCG TCGCGGCGTCAT GAT ATGACGCCGCCA TTTATGAATATTGAA UTI89_C0509 521132 - 520629 - | hypothetical protein UTI89_C0510 521785 - 521129 - | hypothetical protein TERM 719 521793 - 521766 - G 73 -11.4 -2.8071 | gap 1, opp_overlap 521765 CCAACAACAAATTCA TCGAGCT-GTGCT TTC AGCACCAGCCCGA ATTCCTCACGATACC ybaK 522432 - 521953 - | hypothetical protein TERM 720 522091 - 522102 + g 79 -2.2 -5.24129 | GGGGGCGTCGATAAT CGTT GGCA GACG TTTTTTCTGCCCCAG TERM 721 522609 - 522630 + r 95 -7.3 -5.40072 | overlap 522610 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 722 522610 - 522629 + r 85 -10.8 -3.83561 | overlap 522609 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA ybaP 523430 - 522636 - | putative ligase TERM 723 523232 - 523251 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG UTI89_C0513 523533 - 523865 + | hypothetical protein UTI89_C0514 523901 - 524242 + | hypothetical protein TERM 724 524288 - 524259 - T 100 -14.3 -3.30338 | opp_overlap 524256 524283, overlap 524277 ATAATTTCCCTATAA CGGATGCGCCACC CTAA AGCAGCGCATCCG CAATGATGTACTTAT ybaR 526804 - 524300 - | copper exporting ATPase TERM 725 525603 - 525562 - G 72 -8.7 -3.78778 | gap 1, overlap 525555 GCACCATACGAATAA TCCGCGACAGCGTAGTATGG CTG CCA-ACCGCACTGGCGCGAA ACAGCACGCTACCGT TERM 726 525787 - 525800 + g 91 -3.1 -5.47399 | gap 1, opp_overlap 525774, overlap 525787 525788 TACCTGGCTGAACAT C-TGCC AGC GGCACG TTTTTTTCACCTTCG ybaS 527066 - 527998 + | glutaminase TERM 727 528563 - 528582 + G 72 -7.8 -3.88175 | ATATTTCCGTTTCTG CGCCCC CCAGTTCC GGGGCG TTCTTCTCCTGTATC ybaT 528001 - 529293 + | transport protein YbaT TERM 728 529461 - 529443 - g 73 -3.8 -4.7497 | GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCCATTCGCTTCTA cueR 529418 - 529825 + | DNA-binding transcriptional regulator CueR UTI89_C0519 529996 - 529829 - | hypothetical protein UTI89_C0520 530451 - 530029 - | hypothetical protein TERM 729 530254 - 530266 + g 75 -5.5 -4.67353 | CGCCTGGGCATGTTG TGCGG CTT CTGCA TTTTTAAATGCCTGC UTI89_C0521 531553 - 530537 - | adhesin/invasin-like protein UTI89_C0522 531920 - 532282 + | hypothetical protein ybbJ 532843 - 532385 - | hypothetical protein ybbK 533757 - 532840 - | putative protease YbbK ybbL 533903 - 534580 + | putative ABC transporter ATP-binding protein YbbL TERM 730 535331 - 535305 - gT 74 -10.9 -2.6348 | overlap 535304 CGTAAATTTTATAAT TCGCGCCACCA GTTGG TGGTGACGCAA TTGAAGAAGAAATGA ybbM 534540 - 535346 + | putative metal resistance protein TERM 731 535375 - 535344 - T 93 -10.9 -4.4846 | opp_overlap 535349 535352, overlap 535345 CAATTGAAGAAGAAA TGATGCGATGCCG GATGCG CAGCATCGCATCC GGCGTTGTGGTTCAT TERM 732 535374 - 535345 - T 100 -14.4 -3.27992 | opp_overlap 535349 535352, overlap 535344 AATTGAAGAAGAAAT GATGCGATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA TERM 733 535349 - 535382 + T 100 -16.8 -2.81547 | opp_overlap 535345 535344, overlap 535352 GAAGAAGAAATGATG CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA TERM 734 535352 - 535379 + T 100 -14.9 -3.55487 | opp_overlap 535345 535344, overlap 535349 GAAGAAATGATGCGA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC ybbN 536299 - 535409 - | putative thioredoxin-like protein ybbO 537133 - 536324 - | short chain dehydrogenase tesA 537779 - 537123 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 735 537683 - 537663 - GH 79 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCG GCGG-CACG GAAGGTTAACAGGAC TERM 736 537964 - 537993 + GH 72 -4.3 -4.72386 | gap 1, opp_overlap 537958 537957 ACGAAGAAGCGCGGG CAAAG-TTGCGCGC GAA GCACGTAGGCTTTG TTTTTCAGTCATTTA ybbA 537717 - 538403 + | putative ABC transporter ATP-binding protein YbbA TERM 737 538880 - 538890 + G 81 -8.2 -4.39386 | opp_overlap 538880, overlap 538876 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAATCCTTTCCA ybbP 538400 - 540814 + | hypothetical protein ybbB 541967 - 540873 - | tRNA 2-selenouridine synthase TERM 738 541347 - 541360 + g 72 -4.5 -4.70879 | CCACAAGCGCAAATT CTGAC GGGC GTCGG TTTTTAGCATTTCGG ybbS 542962 - 542036 - | DNA-binding transcriptional activator AllS TERM 739 542984 - 542999 + H 71 -4 -4.82819 | gap 1, opp_overlap 542984, overlap 542986 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG ybbT 543192 - 543674 + | ureidoglycolate hydrolase ybbU 543752 - 544567 + | DNA-binding transcriptional repressor AllR TERM 740 544580 - 544597 + F 100 -12.7 -5.40474 | TAGTGTCTGTCGTAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT gcl 544657 - 546438 + | glyoxylate carboligase hyi 546451 - 547227 + | hydroxypyruvate isomerase ybbQ 547327 - 548205 + | 2-hydroxy-3-oxopropionate reductase TERM 741 548248 - 548221 - f 93 -9.3 -5.07486 | gap 1 TACCCGCAATAAAAA TGGCCGATATCA GAAAA TGA-ATCGGCCA GCAATATTAAAAAAA TERM 742 548290 - 548303 + F 89 -2.5 -5.67711 | overlap 548290 548293 AAGATGTTGCTTCAG TATTA AAAA TAATA TTTTTATTTTATTTG TERM 743 548293 - 548309 + F 79 -5.3 -5.12172 | overlap 548290 548290 ATGTTGCTTCAGTAT TAAAAAT AAT ATTTTTA TTTTATTTGTTCCTC TERM 744 549157 - 549133 - g 72 -7.1 -4.1899 | CGACTTTACGCAAAA CGCCCACTC GTTTCGT GAGCAGGCG CTGGGGCAAACGCTG ybbW 548375 - 549829 + | allantoin permease TERM 745 550011 - 549977 - g 73 -3.7 -4.77986 | gap 2, overlap 549978 TTAAAGACGGAAAAA TTGCTGCTATCGGCCAG GAT CTGGGCGAT-GCAA-AA GACGTTATGGATGCG TERM 746 550149 - 550135 - g 90 -10 -4.30576 | CGCGCAGCAGCAAAA GGTGGT ATC ACCACC ATGATCGAAATGCCG TERM 747 551032 - 551020 - g 72 -4.7 -4.72272 | GGTCTGCAGCAAAAA GGCCG TAT CGCCC CAGGAAAAGATGCCG ybbX 549889 - 551250 + | allantoinase TERM 748 551264 - 551284 + F 76 -10.4 -3.36671 | AATCTGGCCCTGCAA TGCCCGTC CTTGT GGCGGGCA TTCTCCGGTTAAGGT TERM 749 551326 - 551356 + G 100 -6.9 -5.63012 | gap 1, opp_overlap 551334 551335 CAATTTTGCAGTGGG CCGC-GAAAGCCTG TTAT CAGGATTTCAGTGG TTTTTCTTTATTTTT ybbY 551300 - 552607 + | putative purine permease YbbY ybbZ 552623 - 553774 + | glycerate kinase II TERM 750 553792 - 553811 + T 100 -10.8 -5.47821 | opp_overlap 553790 ATTACCTTTAAAGCG GATGCGAT TTAT ATCGCATC TTTTTTTACCTGAAT TERM 751 553860 - 553841 - T 100 -13.6 -5.67063 | TTGACTACAAAAAAA GCCACGGT ATAA ACCGTGGC AAAATCCAACATAGC ylbA 554688 - 553903 - | hypothetical protein ylbB 555952 - 554699 - | allantoate amidohydrolase TERM 752 555864 - 555849 - G 70 -6.1 -4.21141 | GGCGAATAAAGTAAA CGGGT CATCCC ACCCG CTGGGTCAGCGCCAA allD 557005 - 555956 - | ureidoglycolate dehydrogenase TERM 753 557086 - 557063 - H 70 -6.1 -4.27861 | overlap 557065 AACATACAGGGAAAA TATCTGGAT TATGTG ATCCAGACA GGCAAAAAAATATAG TERM 754 557814 - 557803 - g 75 -7.2 -4.30448 | AAATCCAACTTAAAA CCCG CGCG CGGG AAAAAGGCTTGCTGG fdrA 557322 - 558989 + | membrane protein FdrA ylbE 558999 - 560258 + | hypothetical protein TERM 755 560837 - 560847 + GF 74 -2.4 -5.1615 | CTTTAGATGCGCGCT CCGG TCG CCCG TTTTTTGCCTGTTCC ylbF 560176 - 561084 + | hypothetical protein TERM 756 561412 - 561428 + G 82 -7.9 -4.56597 | CGCGCATTGAGGTTT CGCCTGA TGA TCCGGCG TTTTTACAGCCAGAG arcC 561081 - 561974 + | carbamate kinase purK 563194 - 562127 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 563727 - 563191 - | phosphoribosylaminoimidazole carboxylase catalytic subunit UTI89_C0552 564125 - 563796 - | hypothetical protein ybbF 564958 - 564236 - | UDP-2,3-diacylglucosamine hydrolase TERM 757 564731 - 564717 - G 74 -6.4 -4.46212 | TTGCCGAGCAGAAAA TCACGG TTG CCATGA ATGAAATAACAGGGA TERM 758 564923 - 564888 - G 100 -12.7 -5.00616 | gap 1, opp_overlap 564897 TCCCCCGCTAAAAAA CGCAGAA-AACCGGCG GTGAT CGCCGGTTCTTCCACG CAGAGATGAAGATCT TERM 759 564897 - 564913 + g 85 -11.5 -3.61398 | opp_overlap 564888 AAAAAACGCAGAAAA CCGGCGG TGA TCGCCGG TTCTTCCACGCAGAG ppiB 565455 - 564961 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 760 565212 - 565222 + g 72 -5.4 -4.58283 | GGGCCATTGCCAGCG TACC ACG GGTA TTTTTCAGACCGTTG cysS 565629 - 567014 + | cysteinyl-tRNA synthetase TERM 761 567026 - 567049 + T 100 -16.8 -3.46602 | GTAATTGCGCTATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA ybcI 567571 - 567050 - | hypothetical protein TERM 762 567428 - 567412 - G 78 -5.1 -4.77036 | opp_overlap 567414 CGCGATGACCAAAAA CATTGCC GTA AGCAACG CCAAATTTAAACGAC TERM 763 567670 - 567649 - RH 100 -15.9 -3.95836 | AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GAAAGGGATCAGGCA ybcJ 567891 - 567679 - | hypothetical protein UTI89_C0557 567657 - 567914 + | hypothetical protein folD 568759 - 567893 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 764 567924 - 567938 + g 72 -7.1 -4.18494 | opp_overlap 567922 567926 TCATGATATTCAACG CACGC CTGTA GCGTG TTTTCAATCAGCGTG TERM 765 568158 - 568175 + g 70 -4.1 -4.72272 | AGTAGATCGGCATTT TCTACGT GGTG ACGCAGA TTTTTAGTGAAACGG UTI89_C0560 568809 - 568997 + | hypothetical protein intD 569467 - 569114 - | prophage DLP12 integrase UTI89_C0563 569834 - 569442 - | prophage DLP12 integrase tfaQ 569748 - 570104 + | lambdoid prophage Qin tail fiber assembly protein-like protein TERM 766 570109 - 570161 + Tr 84 -7 -5.08824 | gap 1, overlap 570111 570114 TCAGAGAGTAATCAT TGGGATTATGCCGCAGCACG-TCGT GCGC AAGAACGTGCTGCGGCTGGATGCTA TTTTTTCCCTGAAGC TERM 767 570111 - 570159 + Tr 74 -7.4 -4.17608 | gap 1, overlap 570109 570114 AGAGAGTAATCATTG GGATTATGCCGCAGCACG-TCGT GCGC AAGAACGTGCTGCGGCTGGATGC TATTTTTTCCCTGAA UTI89_C0565 570824 - 570159 - | hypothetical protein TERM 768 570258 - 570284 + g 76 -3.8 -4.93968 | overlap 570272 TGTTAAGCCTTCTTC GGAATCTTTT GTGTTTG AAAAGATGCC TTTTTGATTGTAAAT TERM 769 570824 - 570834 + g 76 -4 -5.01553 | overlap 570816 TTTTCATTAGTTTCA CTAT GTT ATAG TTTTATTTGTGAATT TERM 770 571040 - 571010 - R 82 -8.2 -4.46233 | overlap 570978 571011 TTAACGGTAAACAAA TTCCCCGGGGCTAT ACA ATACCACCGGGGAG AAAATCTATTTAACG TERM 771 571039 - 571011 - R 83 -11.7 -3.27017 | overlap 570978 571010 TAACGGTAAACAAAT TCCCCGGGGCTAT ACA ATACCACCGGGGA GAAAATCTATTTAAC ompT 572012 - 571059 - | outer membrane protease TERM 772 572335 - 572354 + r 73 -6.4 -4.35581 | opp_overlap 572334 572330 CTGAGACACATAAGG CCTCGCAA TGGC TTGCAAGG TTTTACATATTTTGA TERM 773 572591 - 572581 - R 76 -5.4 -4.78029 | CGAATAAAATGAAAA CAGA AAT TCTG CTAAACAATTCATCT TERM 774 572660 - 572641 - R 76 -7.9 -4.24432 | opp_overlap 572640 572641 AAAGTGAAAAGGAAA GGAGCAA ACTAAG TTGCTCC CTTTAATCATTAATA ybcH 573560 - 572670 - | hypothetical protein nfrA 576554 - 573561 - | bacteriophage N4 receptor, outer membrane subunit TERM 775 575953 - 575977 + gr 71 -2.9 -4.8622 | gap 1 TTCAGGTAGATTGCC CGTTGC-AGC AGATCG GTTCGCAACG TTTTTCCTTCCGGCG TERM 776 576418 - 576403 - GR 79 -4 -5.05116 | gap 1, opp_overlap 576416, overlap 576405 GGATAAATAACAAAA TG-GCGA TAA TCGCTCA GCCCCAGCTCTTCTG nfrB 578757 - 576520 - | bacteriophage N4 adsorption protein B TERM 777 577465 - 577437 - GR 78 -7.4 -4.36914 | gap 1 GGTTGCCCCAGAAAA GACGCAGG-ACAG ATAG CAGCCCCTGCGTC AGGCCGTAGTAGCCA TERM 778 577645 - 577629 - GR 72 -5.1 -4.44797 | overlap 577621 CCAGCAACAGCAAAA GCTGG ATCATCA CCAGC ATCGCGAGGAAGCTG TERM 779 578064 - 578036 - GR 75 -9.6 -3.53012 | gap 1, opp_overlap 578063, overlap 578038 GCGCGGCGGCTGAAA CAGGTGCCGA-CG CCTG CGCTGGGCACCTG TCCGGCGAGGGCTTC TERM 780 578176 - 578190 + gr 72 -8.6 -3.59979 | GAACGGATACACTGG GATCTG AAT CAGATC TTTACGCTCGACCAG cusS 580349 - 578907 - | sensor kinase CusS TERM 781 579285 - 579267 - G 70 -5.9 -4.15044 | opp_overlap 579268, overlap 579268 CTCGTCGCCAACAAA CCGCAGC TCCAC GCCGCGA TCTTCTGCTAACGCC TERM 782 580284 - 580269 - G 77 -6 -4.70879 | overlap 580260 TGCAAAGGCGAAAAA CGCCGC GATG GTGGCG AGGCTGATAAAAAAG ylcA 581022 - 580339 - | DNA-binding transcriptional activator CusR TERM 783 581084 - 581105 + H 74 -6.7 -4.34402 | opp_overlap 581092, overlap 581083 ATGGCAATCGCTTAT TGGCAAAAT GACA ATTTTGTCA TTTTCCTGTCACCGG TERM 784 582072 - 582087 + G 81 -6.8 -4.65838 | overlap 582083 TAATGCCAATATTGG TGCTGC GCGT GCGGCA TTTTTCCCGTCTATC TERM 785 582545 - 582533 - g 71 -10.5 -2.8806 | AAATTTCTTTATATA CCGCC TTA GGCGG CGGTTGGCAGCAATA cusC 581179 - 582561 + | copper/silver efflux system outer membrane protein CusC ylcC 582585 - 582917 + | periplasmic copper-binding protein UTI89_C0574 582933 - 584156 + | copper/silver efflux system membrane fusion protein CusB TERM 786 584193 - 584205 + G 70 -4.8 -4.49311 | overlap 584183 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTCTGGTGCTGAT TERM 787 585968 - 585942 - g 76 -3.6 -5.02074 | GCATGCTGCAAAAAA CCGACAAGCTGA TTA TGAGCGTACCGG AAGTGGCGCGGGTAT cusA 584168 - 587311 + | putative cation efflux system protein CusA TERM 788 587644 - 587679 + G 84 -11.2 -3.71873 | gap 1, opp_overlap 587655 CAGCTCGGCGAGATG GTGGTCGAA-GAGCCGG TAT CCGGTTCATTTGCCCAC TTTGCCTATAAATAC pheP 587377 - 588789 + | phenylalanine transporter TERM 789 588801 - 588790 - T 70 -7.2 -3.90744 | CTGCGTCGGAAATAA GGCG TTCA CGCC GCATCCGACAAAATG TERM 790 588862 - 588834 - T 85 -11 -3.72051 | opp_overlap 588835, overlap 588835 GTCAACAATCTGAAA GCCGCTCTCACC CATTC GATGAGAGCGGT TTTTTTAATTACTGC TERM 791 588861 - 588835 - T 87 -14.5 -2.82749 | opp_overlap 588835, overlap 588834 TCAACAATCTGAAAG CCGCTCTCACC CATTC GATGAGAGCGG TTTTTTTAATTACTG TERM 792 588835 - 588861 + T 100 -12.3 -5.65513 | opp_overlap 588835 588834 TCAACAATCTGAAAG CCGCTCTCACC CATTC GATGAGAGCGG TTTTTTTAATTACTG ybdG 590118 - 588871 - | hypothetical protein TERM 793 590218 - 590197 - R 87 -11.5 -3.61103 | overlap 590199 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GGGAGAATTACACTT TERM 794 590216 - 590199 - R 100 -14.1 -3.38224 | overlap 590197 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGGGAGAATTACAC nfnB 590879 - 590226 - | dihydropteridine reductase ybdF 591341 - 590958 - | hypothetical protein TERM 795 591118 - 591140 + g 74 -9.9 -3.52909 | overlap 591116 TTTTTATTCATGTGA TACCCAGGC TTGAT GCTTGGGTA TATTTGCTGATTTAG ybdJ 591654 - 591406 - | hypothetical protein ybdK 592838 - 591720 - | carboxylate-amine ligase TERM 796 592410 - 592397 - G 82 -8.1 -4.49556 | CGTGCAGCAAATAAA TGGCG TCAT CGCCA CTGGCGCAGCCAACA UTI89_C0582 593323 - 593054 - | hypothetical protein TERM 797 593229 - 593197 - G 82 -11.4 -3.45571 | gap 1, opp_overlap 593225, overlap 593191 GTCTGGAAAGATGAA GCCCCAGGA-CGATA TTTC TATCAACCCTGGGGC TACCTACCCAAACCT TERM 798 593445 - 593477 + r 80 -10.6 -3.32963 | gap 1, opp_overlap 593444, overlap 593445 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GCAA TCCCCGCATATCCGG TTGTCAGGTCAGGGT TERM 799 593445 - 593476 + r 74 -10.8 -2.59564 | opp_overlap 593444, overlap 593445 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GCAA TCCCCGCATATCCG GTTGTCAGGTCAGGG entD 594336 - 593566 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 800 593909 - 593892 - G 73 -9.1 -3.59979 | TTGGTTGACGGGAAA CCACGGC TAAT GCCGTAG TCCCACAGTGACTAA fepA 596601 - 594361 - | outer membrane receptor FepA TERM 801 594724 - 594755 + gH 77 -2.9 -5.11836 | gap 1, overlap 594727 TGAGTTCAACGTATA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 802 595926 - 595943 + gH 75 -6.9 -4.4017 | GGCCCTGGTTGATAT CCCACGC GTCA GCCTGGG TTTTGTCGAGGTTGC TERM 803 596406 - 596419 + gH 70 -3.7 -4.64657 | TGATCTCCGATACAT CGCGG GCAA CCGGG TTTTTGCGGATTTCA UTI89_C0585 596594 - 596725 + | hypothetical protein TERM 804 597109 - 597119 + G 72 -6.8 -4.2704 | opp_overlap 597095, overlap 597106 ATGCCAACTGGCGTG GCAG CTA CTGC TTTATTCCTACTGAA fes 596844 - 598046 + | enterobactin/ferric enterobactin esterase UTI89_C0587 598043 - 598267 + | hypothetical protein TERM 805 599682 - 599666 - g 95 -10.1 -4.64144 | overlap 599657 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGCAGATGCGCGT TERM 806 600341 - 600360 + G 76 -7.8 -4.2123 | opp_overlap 600329 CGACCACGCACTTTG TGCCGTCG ATGC TGGCGGCA TTTGTTGCATCGCTG TERM 807 601480 - 601490 + G 78 -8.2 -4.18762 | CTGTTTTGTTTCCAT CCGG CAT CCGG TTTTGCCTGGCAGTT entF 598264 - 602145 + | enterobactin synthase subunit F TERM 808 602158 - 602196 + F 71 -9.2 -3.37482 | opp_overlap 602147 602164, overlap 602158 602160 602164 TAAATTTATATTATC TATAAACCCATAATTA CAGAAAA TAATTATGGGTTTATC ATTTGTTTAATTTAT TERM 809 602158 - 602197 + F 82 -7.6 -4.65182 | gap 1, opp_overlap 602147 602164, overlap 602158 602160 602164 TAAATTTATATTATC T-ATAAACCCATAATTA CAGAAAA TAATTATGGGTTTATCA TTTGTTTAATTTATA TERM 810 602160 - 602194 + F 83 -11.8 -3.23149 | opp_overlap 602147 602164, overlap 602158 602158 602164 AATTTATATTATCTA TAAACCCATAATTA CAGAAAA TAATTATGGGTTTA TCATTTGTTTAATTT TERM 811 602164 - 602190 + F 76 -8.2 -4.23391 | opp_overlap 602164, overlap 602160 602158 602158 TATATTATCTATAAA CCCATAATTA CAGAAAA TAATTATGGG TTTATCATTTGTTTA TERM 812 602190 - 602164 - f 79 -8.9 -3.94409 | opp_overlap 602164 602160 602158 602158 TATATTATCTATAAA CCCATAATTAC AGAAA ATAATTATGGG TTTATCATTTGTTTA fepE 602361 - 603494 + | ferric enterobactin transport protein FepE fepC 604306 - 603491 - | iron-enterobactin transporter ATP-binding protein fepG 605295 - 604303 - | iron-enterobactin transporter permease TERM 813 605087 - 605061 - G 95 -10 -4.67353 | overlap 605062 TCAGCGACTGAAAAA TCGCGCCGCTGA CGC CCAGCGCCGCGC CAATCAACAGCGCCA TERM 814 605086 - 605062 - G 89 -13.5 -3.3993 | overlap 605061 CAGCGACTGAAAAAT CGCGCCGCTGA CGC CCAGCGCCGCG CCAATCAACAGCGCC fepD 606308 - 605292 - | iron-enterobactin transporter membrane protein TERM 815 607268 - 607247 - g 70 -5.9 -4.17023 | gap 1, opp_overlap 607247 TTAACCAGTGGAAAA CTGGCGCATA GCG TACG-GCCAG GTCTGTTGATGTTGC ybdA 606407 - 607657 + | enterobactin exporter EntS fepB 608617 - 607661 - | iron-enterobactin transporter periplasmic binding protein TERM 816 608281 - 608326 + g 74 -8.4 -3.89435 | gap 2, overlap 608272 608322 GATCCGGCATTTGCG CGGCAACGGCTTCTGCACTCGG TTCG CCGA-TATAG-AGCCGTTGCAG TTTGCGTTCTTTCGC TERM 817 608377 - 608387 + g 74 -8.2 -3.94634 | AAAAGCCCTGGTCAT CCGC GAC GCGG TTATTTGGCGTGGTC entC 608794 - 609981 + | isochorismate synthase TERM 818 611201 - 611216 + G 71 -3.2 -4.87626 | AGCACAATGCCAGCG CCTTTG ATGC CAACGG TTTTTACTGTTCCGG TERM 819 611586 - 611566 - g 70 -3.9 -4.72201 | overlap 611569 GTCGATAAAAAACAA TTACGTCAG TGG CTGGCGTCA CGCACATCAGCCTGA entE 609991 - 611601 + | enterobactin synthase subunit E entB 611615 - 612472 + | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase entA 612472 - 613218 + | 2,3-dihydroxybenzoate-2,3-dehydrogenase ybdB 613221 - 613634 + | hypothetical protein TERM 820 615287 - 615299 + G 72 -6.9 -4.19177 | overlap 615286 GGTGGATGCGGGTAC GCGTG CTG CGCGC TTTATGTTGCAGGAT cstA 613815 - 615920 + | carbon starvation protein A ybdD 616033 - 616230 + | hypothetical protein ybdH 617328 - 616240 - | hypothetical protein TERM 821 616546 - 616536 - G 70 -6.8 -4.07568 | opp_overlap 616536, overlap 616516 616544 CGGTTTGTGGCAAAA CGGT AAG ACCG TTATGCACGGCATGG TERM 822 618008 - 618036 + G 76 -3.8 -4.98255 | gap 1, overlap 618007 GACTGATTTCGCCGC TCT-GTGGCAGGC GATC GCCGGGCACGAGA TTTTTGTCATTAGCG ybdL 617448 - 618608 + | putative aminotransferase ybdM 619238 - 618609 - | hypothetical protein TERM 823 618636 - 618670 + gT 70 -7.2 -3.90588 | opp_overlap 618636 618640 CCAGGCGCGGGAAAA TTGACGGTCGGCAA ACAACTC TTGCAGGCCGTTAA TTTGCTTCAGGCGTA ybdN 620431 - 619211 - | hypothetical protein TERM 824 620451 - 620439 - R 74 -5.5 -4.73448 | ATAGACATCTAAAAA CGCTC TCT GAACG TTACGGGGTGACTCG ybdO 621516 - 620578 - | transcriptional regulator YbdO dsbG 622431 - 621685 - | disulfide isomerase/thiol-disulfide oxidase TERM 825 622878 - 622856 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 622803 - 623366 + | alkyl hydroperoxide reductase subunit C TERM 826 623430 - 623449 + F 100 -13.6 -4.63218 | AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 827 623581 - 623564 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 623507 - 625102 + | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides TERM 828 625133 - 625156 + T 100 -13.1 -5.5074 | opp_overlap 625148 ACCTGTAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATTGCATTA TERM 829 625203 - 625176 - T 100 -11.2 -4.7373 | overlap 625148 TTATTGCATTAAAAA GCCCTGCAGGGA TGGC TCCGGGCAGGGC GGGAGACTTATTCTG uspG 625684 - 625223 - | universal stress protein UspG TERM 830 625972 - 625953 - gR 89 -12.2 -3.60805 | ATATTTGAGCGGAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 626417 - 626007 - | nucleoside diphosphate kinase regulator UTI89_C0611 625935 - 626318 + | hypothetical protein TERM 831 626497 - 626475 - TR 100 -12.7 -5.11836 | opp_overlap 626475 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 832 626475 - 626497 + Tr 87 -11.2 -3.6608 | opp_overlap 626475 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT TERM 833 626546 - 626580 + Tr 72 -8.6 -3.6164 | overlap 626532 CTCTTTGAAGTGATT TGCGTCACATTCAGGG AAT TCCTCAATGTAGCGCA TTATGTATAAATCTT rna 627471 - 626647 - | ribonuclease I TERM 834 627431 - 627417 - G 77 -8.5 -4.13872 | overlap 627408 627427 627428 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGCCAGAATG TERM 835 627501 - 627542 + r 76 -7.9 -4.19371 | opp_overlap 627508, overlap 627504 TTATCTATTAAATCA TAAAAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 836 627504 - 627539 + r 71 -9.6 -3.10512 | opp_overlap 627508, overlap 627501 TCTATTAAATCATAA AAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGA TGATTTATTCAGCGT TERM 837 627535 - 627508 - R 100 -18.5 -5.42265 | opp_overlap 627504 627501 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA citT 629030 - 627567 - | citrate DASS carrier/transporter TERM 838 628548 - 628532 - G 77 -6.5 -4.64598 | opp_overlap 628538, overlap 628503 628533 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 839 628547 - 628533 - G 72 -10 -3.38036 | opp_overlap 628538, overlap 628503 628532 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG citG 629959 - 629081 - | triphosphoribosyl-dephospho-CoA synthase citX 630485 - 629934 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase citF 632021 - 630489 - | citrate lyase alpha chain UTI89_C0617 630453 - 631847 + | hypothetical protein citE 632955 - 632032 - | citrate lyase beta chain (acyl lyase subunit) citD 633233 - 632937 - | citrate lyase subunit gamma UTI89_C0619 632023 - 633069 + | hypothetical protein citC 634393 - 633248 - | citrate lyase synthetase (citrate (pro-3S)-lyase ligase) TERM 840 633556 - 633536 - G 72 -7.5 -3.93695 | TTCAGTACCGACAAA GCGGTGAGT TAC ACCCAGCGC GGGAGCGAGGTACTG TERM 841 633992 - 633981 - G 77 -7.2 -4.58395 | opp_overlap 633988, overlap 633983 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT TERM 842 634240 - 634254 + g 100 -2.7 -6.14618 | overlap 634241 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 843 634241 - 634253 + g 70 -6.2 -4.25111 | overlap 634240 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 844 634334 - 634381 + g 90 -7.3 -5.13343 | gap 1, overlap 634335 CCTGAAGGTGCATGT TGTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAATTGATAACC TTTTATTTTCACTTG TERM 845 634335 - 634380 + g 81 -10.8 -3.66379 | gap 1, overlap 634334 CTGAAGGTGCATGTT GTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAATTGATAAC CTTTTATTTTCACTT TERM 846 635867 - 635879 + GH 71 -3.3 -4.7373 | TTTGCCGATCGCCAG GTGGC GGG GCTGC TTTTTGGTAAAGTGC dpiB 634625 - 636343 + | sensor kinase DpiB dpiA 636312 - 636992 + | two-component response regulator DpiA TERM 847 636995 - 637031 + T 76 -8.7 -3.94746 | opp_overlap 637002 637014, overlap 636997 636998 637001 637002 CCACAGTGGGTGACA TGATAAAGCCGGAGGAA ACT TGCCTCCGGCATTACTA TTTACTTGCCTGTGA TERM 848 636997 - 637029 + T 73 -9.1 -3.56006 | opp_overlap 637002 637014, overlap 636995 636998 637001 637002 ACAGTGGGTGACATG ATAAAGCCGGAGGAA ACT TGCCTCCGGCATTAC TATTTACTTGCCTGT TERM 849 636998 - 637028 + T 82 -12.6 -2.72881 | opp_overlap 637002 637014, overlap 636997 636995 637001 637002 CAGTGGGTGACATGA TAAAGCCGGAGGAA ACT TGCCTCCGGCATTA CTATTTACTTGCCTG TERM 850 637001 - 637025 + T 75 -9.9 -3.50456 | opp_overlap 637002 637014, overlap 636998 636997 636995 637002 TGGGTGACATGATAA AGCCGGAGGAA ACT TGCCTCCGGCA TTACTATTTACTTGC TERM 851 637024 - 637002 - T 100 -13.4 -4.0162 | opp_overlap 637001 636998 636997 636995 637002, overlap 637014 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG TERM 852 637002 - 637024 + T 85 -13.4 -2.6955 | opp_overlap 637002 637014, overlap 637001 636998 636997 636995 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG dcuC 638418 - 637033 - | C4-dicarboxylate transporter DcuC TERM 853 638477 - 638460 - H 89 -2.7 -5.72254 | GTAAATAATAAAAAA TTCCTAA AAGT TAAGGAA AAAATATGCCCAATA TERM 854 639230 - 639207 - g 100 -4.5 -5.73978 | opp_overlap 639224, overlap 639208 639223 ACGACAAAGAAAAAA CCGATCGCT ATAACG AGCGACCGT GGGGCGGCGGTTTTG TERM 855 639229 - 639208 - g 74 -8 -4.01946 | opp_overlap 639224, overlap 639207 639223 CGACAAAGAAAAAAC CGATCGCT ATAACG AGCGACCG TGGGGCGGCGGTTTT crcA 639005 - 639565 + | palmitoyl transferase for Lipid A TERM 856 639698 - 639714 + G 70 -7.3 -4.02302 | opp_overlap 639700 GGTGTACTGGTAACC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 639656 - 639949 + | cold shock protein CspE TERM 857 639973 - 639989 + T 100 -9.4 -6.11019 | opp_overlap 639973 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTTTTT TERM 858 639989 - 639973 - T 86 -9.4 -4.36729 | opp_overlap 639973 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTTTTT crcB 640386 - 640003 - | hypothetical protein TERM 859 640451 - 640439 - H 75 -9.1 -3.65314 | opp_overlap 640439 640438 TGTAACGCCGAATAA TCGCC GTT GGCGA ATTTTACGACTCTGA TERM 860 641123 - 641105 - g 77 -3 -5.06414 | opp_overlap 641107 641119, overlap 641107 GTGCGGGAACAAAAA TATCGGGC AAA GCCGGATT ATAGATCCCTTTGGC ybeM 640476 - 641270 + | putative amidase tatE 641399 - 641602 + | twin arginine translocase protein E TERM 861 641648 - 641665 + T 100 -11.3 -5.24129 | opp_overlap 641648 TGTTCGATACAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG TERM 862 641665 - 641648 - T 100 -11.3 -4.96848 | opp_overlap 641648 TGTTCGATACAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG lipA 642667 - 641702 - | lipoyl synthase TERM 863 642557 - 642590 + g 74 -6 -4.57073 | gap 1, overlap 642559 TTTCATCCATTCCGG CTTGCGCAGCAGGGC TTCGC GCTCTGTTGC-CACG TTTTTAACCGGGATA lipB 644128 - 643487 - | lipoyltransferase ybeD 644492 - 644229 - | hypothetical protein TERM 864 644550 - 644519 - R 70 -7.2 -3.95986 | opp_overlap 644525, overlap 644521 644525 CGTAACGTAATTAAA TAGCAACTCCCGCC AGAA GGCGGGAGTTTTTT ACTGATGCTTAGTAT TERM 865 644548 - 644521 - R 75 -9.8 -3.56675 | opp_overlap 644525, overlap 644519 644525 TAACGTAATTAAATA GCAACTCCCGCC AGAA GGCGGGAGTTTT TTACTGATGCTTAGT TERM 866 644525 - 644544 + r 100 -15 -5.19212 | opp_overlap 644525 644521 644519 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT TERM 867 644544 - 644525 - R 100 -15 -3.50456 | opp_overlap 644525, overlap 644521 644519 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT dacA 645813 - 644602 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 868 645496 - 645481 - G 77 -10.4 -3.64049 | CGAAGAACCTTTAAA CACCGG GTTA CCGGTG GCCCATGCGTCGTTG rlpA 647041 - 645953 - | rare lipoprotein A mrdB 648164 - 647052 - | cell wall shape-determining protein TERM 869 648105 - 648139 + g 100 -6.5 -5.80364 | CAGTAAGATCAGCAG CATTGTGGGATCGAG ATGGA CTTTATCCCAGAATG TTTTTTTATTCGGAT mrdA 650068 - 648167 - | penicillin-binding protein 2 TERM 870 648732 - 648745 + g 74 -2.3 -5.03747 | opp_overlap 648743, overlap 648723 648743 ACCGGAATGGTGTCA CCCTG ATAC CACGG TTTTTTAAAGCGTTT TERM 871 650009 - 649997 - G 77 -6.2 -4.66264 | overlap 649998 CAAAATCCCCAAAAA GGCG ACCAG CGCC CGGCGCACAAACAGC ybeA 650566 - 650099 - | SPOUT methyltransferase superfamily protein ybeB 650887 - 650570 - | hypothetical protein UTI89_C0640 650901 - 651191 + | hypothetical protein phpB 651761 - 651147 - | alpha-ribazole-5'-phosphate phosphatase nadD 652486 - 651782 - | nicotinic acid mononucleotide adenylyltransferase TERM 872 652125 - 652115 - GR 70 -4.6 -4.48713 | overlap 652117 CTGACCAATAATAAA CGCC AGC GGCA CGTCCGGTCCTTGCT holA 653456 - 652425 - | DNA polymerase III subunit delta TERM 873 653435 - 653393 - GR 100 -12 -4.45544 | gap 1, opp_overlap 653397, overlap 653395 653397 CGTTACCAAGTAAAA GATACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGT-TG TTCCGGGTACAACCG TERM 874 653434 - 653395 - GR 100 -17.1 -3.83437 | opp_overlap 653397, overlap 653393 653397 TTACCAAGTAAAAGA TACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGTT GTTCCGGGTACAACC TERM 875 653397 - 653432 + gr 100 -17.5 -3.63515 | opp_overlap 653395 653393 653397 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA TERM 876 653432 - 653397 - GR 100 -19.7 -3.49321 | opp_overlap 653397, overlap 653395 653393 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA rlpB 654037 - 653456 - | LPS-assembly lipoprotein RplB TERM 877 653806 - 653838 + g 70 -4.7 -4.55295 | opp_overlap 653811 CGATGCTCACTTTAC CCAAACGCAGGGATG GAA CGTCCTTACGCGTGG TTTCTTTATCAAGCA TERM 878 653972 - 653953 - G 72 -10 -3.36785 | overlap 653954 TCATAGTGGAAGGAA CCTGCGTG GTGT CACGCAGA TGCCAGCCACACCCG TERM 879 653971 - 653954 - G 73 -11.3 -2.6175 | overlap 653953 CATAGTGGAAGGAAC CTGCGTG GTGT CACGCAG ATGCCAGCCACACCC leuS 656775 - 654052 - | leucyl-tRNA synthetase TERM 880 654180 - 654194 + g 72 -5.6 -4.57341 | overlap 654171 654181 GTTCTTCCGTTGCGT CCACCG GAA CGGTGA TTTTTGCACGGACTT TERM 881 656289 - 656305 + g 78 -5.1 -4.8048 | opp_overlap 656287 AGTCATAACCAAAGC CCAGC ATTTTGA GCTGG TTTTTCATATACGCG TERM 882 656394 - 656419 + g 74 -6.2 -4.57073 | gap 2, opp_overlap 656393 CAGGCAGACCAAATG CGTCC--CAGCC GATT GGCTGCAGGACG TTTTTGCCCAGCATA ybeL 656869 - 657351 + | hypothetical protein rihA 658331 - 657396 - | ribonucleoside hydrolase 1 gltL 659174 - 658449 - | ATP-binding protein of glutamate/aspartate transport system gltK 659848 - 659174 - | glutamate/aspartate transport system permease gltJ 660588 - 659848 - | GltJ, subunit of glutamate ABC transporter TERM 883 660279 - 660262 - G 71 -2 -5.01811 | overlap 660255 GGATGAAAGGAAAAA CTGAAT ATTGGG ATCCAG CTCTGCCTTAAACCA TERM 884 660635 - 660608 - R 100 -16.4 -5.26316 | CTACTCCAGAAAAAA GAGGGTAGCAGC GTTA ACTGCTACCCTC GAAGATTGTTACCCA ybeJ 661735 - 660758 - | glutamate and aspartate transporter subunit TERM 885 661001 - 661012 + g 70 -5.8 -4.29326 | overlap 660992 CTTGCCGACGATTTC CCAG TTGT CTGG TTTCTTCGCTTTCGC TERM 886 661216 - 661244 + g 81 -7.3 -4.72272 | overlap 661205 CGGCTTTGCCTTTCA GGTCGGCAAAATC TTT GATATCGCCGCCC TTTTTGGTCAGCAGG UTI89_C0652 661801 - 661923 + | hypothetical protein UTI89_C0653 662120 - 663997 + | hypothetical protein TERM 887 664023 - 664005 - gT 100 -13.2 -5.4756 | AACCGTAAGAAAAAA GGGCATGA TAA TCATGCCC CAGAGCGTGTTGAAA UTI89_C0654 663966 - 664142 + | hypothetical protein lnt 665665 - 664124 - | apolipoprotein N-acyltransferase TERM 888 665615 - 665641 + g 70 -10.2 -3.20723 | gap 1, opp_overlap 665615 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC TERM 889 665641 - 665615 - G 81 -10.2 -3.97307 | gap 1, opp_overlap 665615 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC ybeX 666568 - 665690 - | putative transport protein TERM 890 666627 - 666604 - R 84 -8.8 -4.43477 | overlap 666606 666623 GTTAGTTAATCAAAA CGCCGTCGTT AATC ACCAACGGCG GGGACGTCTGCCAGT ybeY 667125 - 666658 - | putative metalloprotease TERM 891 667066 - 667081 + g 73 -9 -3.67611 | CTGAAACTGGCTCTC TTCCGG TAAC CCGGAA TTATCTTCACATGCC ybeZ 668201 - 667122 - | putative ATP-binding protein in pho regulon TERM 892 667289 - 667269 - G 72 -8.3 -3.85389 | overlap 667288 GTGGAAGAAGTTAAA GCTGATCTC TTC GACATCAGC CAGCACTTCGATGGC TERM 893 667801 - 667820 + g 82 -9.2 -4.26292 | overlap 667782 GCCTGGTTTGGCGTG CGCGGCTT AATT ACGCCGCG TTTGGTTTTGATATT TERM 894 668046 - 668069 + g 81 -9.6 -4.10459 | gap 1 ATCGCGGCGATTGAT CTCG-ATGCCG AGA CGGCGTTCGAG TTGTTTGATGTTGTC TERM 895 668310 - 668285 - R 100 -13.3 -5.51046 | gap 1, overlap 668288 TAAAGAGAGAAAAAA CAAGGCCCACCG GAA CGGCGGGCCT-G AGAATTACGGCTGAT TERM 896 668308 - 668288 - R 100 -16.1 -4.78477 | overlap 668285 AGAGAGAAAAAACAA GGCCCACCG GAA CGGCGGGCC TGAGAATTACGGCTG UTI89_C0659 669739 - 668315 - | hypothetical protein TERM 897 669390 - 669367 - G 72 -10.2 -3.39505 | gap 1, opp_overlap 669366 669371 669379 AGCTGATATCTACAA CCGGGCTGCGG TCG CCGC-GCACGG AGTTGATCATCTCCG ubiF 669885 - 671060 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 898 671095 - 671126 + T 100 -13 -3.87815 | opp_overlap 671104 671106 671107 GCATGCCAACCGTAG GTCGGATAAGACGC GGCA GCGTCGCATCCGAC TTTGTAAGGATAAGA TERM 899 671210 - 671183 - T 81 -11.4 -3.2697 | opp_overlap 671189, overlap 671189 ATATACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTT AATGTGGCTGGGGTA TERM 900 671204 - 671189 - T 93 -10.4 -5.1417 | opp_overlap 671189, overlap 671183 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 901 671189 - 671204 + T 100 -10.4 -5.22312 | opp_overlap 671189 671183 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 902 671399 - 671410 + T 73 -4.4 -4.81249 | CCGCTTGGCGATACC CCAA CAAA TTGG TTTTTGAATTTGCCG TERM 903 672266 - 672289 + T 100 -16.8 -3.06583 | opp_overlap 672266, overlap 672260 672258 CCCCAGTAACTGAAA TTGCCCCGGA TTTC TCCGGGGCAA TATTACACGTCTTAT TERM 904 672289 - 672266 - T 100 -16.8 -3.78329 | opp_overlap 672266 672260 672258 CCCCAGTAACTGAAA TTGCCCCGGA TTTC TCCGGGGCAA TATTACACGTCTTAT asnB 674199 - 672301 - | asparagine synthetase B TERM 905 672665 - 672675 + g 71 -3.2 -4.87318 | overlap 672659 GCTTCAAAACATTCA CGCA GGA TGTG TTTTTCCATTTTGCC TERM 906 674035 - 674021 - G 100 -7.8 -5.40072 | overlap 674030 674033 TGCTTGTTAAAAAAA TGCCGC AAA GCAGCA CGGTGCGCAAGCGAT TERM 907 674123 - 674140 + g 70 -3.5 -4.61527 | GGCTTTTGGGTATAT TTATTGA TGGA TCGATAA TTTTTGACGGGTTTT TERM 908 674192 - 674217 + g 83 -13.3 -3.06162 | opp_overlap 674192 674196, overlap 674196 GATGGGTAAAAATAA GAAACCACGCC CTGA GGCGTGGTTGC TATTCAGATAACGTC TERM 909 674217 - 674192 - G 100 -13.3 -4.41633 | opp_overlap 674192 674196, overlap 674196 GATGGGTAAAAATAA GAAACCACGCC CTGA GGCGTGGTTGC TATTCAGATAACGTC TERM 910 674213 - 674196 - G 100 -12.7 -4.76802 | opp_overlap 674192 674196, overlap 674192 GGTAAAAATAAGAAA CCACGCC CTGA GGCGTGG TTGCTATTCAGATAA TERM 911 674196 - 674213 + g 83 -12.7 -3.37245 | opp_overlap 674196 674192, overlap 674192 GGTAAAAATAAGAAA CCACGCC CTGA GGCGTGG TTGCTATTCAGATAA nagD 674973 - 674221 - | UMP phosphatase nagC 676241 - 675021 - | transcriptional repressor of nag (N-acetylglucosamine) operon nagA 677398 - 676250 - | N-acetylglucosamine-6-phosphate deacetylase TERM 912 676553 - 676543 - G 70 -4 -4.59773 | TTTTACCCGCAAAAA TGAA CTG TTCA ATGTTGGCACCTGCT TERM 913 677448 - 677423 - R 72 -6.9 -4.15748 | gap 1, overlap 677424 CGATTTTAAAAAATA TTGCCCTGAGCA AGG TG-TCAGGGCAG GGATAATAATTACAG TERM 914 677447 - 677424 - R 73 -10.4 -3.08726 | gap 1, overlap 677423 GATTTTAAAAAATAT TGCCCTGAGCA AGG TG-TCAGGGCA GGGATAATAATTACA nagB 678258 - 677458 - | glucosamine-6-phosphate deaminase TERM 915 677872 - 677885 + g 100 -6.7 -5.52023 | AAACAGATGAATTTT TCCGT AAGA ACGGA TTTTTTCTTCATACT UTI89_C0673 678441 - 678307 - | hypothetical protein TERM 916 678646 - 678668 + G 74 -11.2 -3.1886 | overlap 678658 TACAGCTCCCTATCG CGGTGCTGCC GGT GGCGGCGCTG TTGCTGCGATTCGGT nagE 678591 - 680537 + | N-acetyl glucosamine specific PTS system components IIABC UTI89_C0675 680659 - 680507 - | hypothetical protein TERM 917 680592 - 680534 - GT 80 -5.59999 -5.01811 | gap 3, opp_overlap 680528 680572 680588, overlap 680538 680539 680579 680588 GTATGAAATCAAAAA GTAATCTGCTTTA-TGTCTGATGCGACGC GGCA GCGTCGCATCAGACAATAAAA-AG-CGGC AGGGATCTTCTCTGC TERM 918 680589 - 680538 - GT 100 -14.1 -3.90592 | opp_overlap 680528 680572 680588, overlap 680534 680539 680579 680588 GAAATCAAAAAGTAA TCTGCTTTA-TGTCTGATGCGACGC GGCA GCGTCGCATCAGACAATAAAA-AGC GGCAGGGATCTTCTC TERM 919 680588 - 680539 - GT 100 -17.6 -2.92728 | opp_overlap 680528 680572, overlap 680538 680534 680579 AAATCAAAAAGTAAT CTGCTTTA-TGTCTGATGCGACGC GGCA GCGTCGCATCAGACAATAAAA-AG CGGCAGGGATCTTCT TERM 920 680572 - 680625 + gT 100 -18.5 -3.17194 | gap 1, opp_overlap 680539 680538 680534 680579 680588, overlap 680588 GACGCGGCAGCGTCG CATCAGACAATAAAAAGCGGCAGGGA TCT TCTCTGCCGCTTTTT-TTGTCTGAGA TTACATTGGGAAGAT TERM 921 680618 - 680579 - GT 100 -16 -2.78596 | gap 1, opp_overlap 680572 680588, overlap 680539 680538 680534 680588 CAGCGTCGCATCAGA CAATAAAAAGCGGCAGGGA TCT TCTCTGCCGCTTTTT-TTG TCTGAGATTACATTG TERM 922 680610 - 680588 - GT 100 -13.4 -5.25699 | opp_overlap 680572 680588, overlap 680538 680534 680579 ATCAGACAATAAAAA GCGGCAGGGA TCT TCTCTGCCGC TTTTTTTGTCTGAGA TERM 923 680588 - 680610 + gT 100 -15.6 -5.71712 | opp_overlap 680538 680534 680588 680579, overlap 680572 ATCAGACAATAAAAA GCGGCAGGGA TCT TCTCTGCCGC TTTTTTTGTCTGAGA TERM 924 680666 - 680646 - GT 77 -3.2 -5.0916 | overlap 680648 TTGGGAAGATAAAAA CAGCGCCT GCACA AAGCGCCA GAATGCGGATGAGAT TERM 925 680664 - 680648 - GT 70 -5.8 -4.17211 | overlap 680646 GGGAAGATAAAAACA GCGCCT GCACA AAGCGC CAGAATGCGGATGAG UTI89_C0676 681906 - 680626 - | hypothetical protein TERM 926 681648 - 681689 + gr 84 -3.6 -5.24129 | AACTGCCTTTATTGA CCAGGCTTATCATCGCAG ATTTAA CGTTGCTGATAAGCCGGG TTTTTTGTAGCGCCG UTI89_C0677 682390 - 681920 - | hypothetical protein UTI89_C0678 683556 - 682387 - | hypothetical protein TERM 927 682658 - 682671 + g 72 -8.1 -3.93256 | opp_overlap 682650 682649 CAGAAAGCGGAGCGT CCGAC GGCT GTCGG TTCTTTGCGGCTGTC TERM 928 682685 - 682700 + g 76 -9 -3.78775 | GGTTCTTTGCGGCTG TCGTCG CCAT CGACGA TTTCGTCATAAAGCG TERM 929 683614 - 683633 + r 80 -7.2 -4.56978 | GAGTGCGATTCATGC GTTTCGAT CAAT GTCGAAAC TTTCTTCTTTCACGG UTI89_C0679 685289 - 684402 - | dihydrodipicolinate synthase UTI89_C0680 686450 - 685293 - | putative alcohol dehydrogenase TERM 930 685612 - 685599 - G 70 -5.9 -4.16016 | CCAGGGGCGAACAAA CGCCA TGCA CGGCG CCAGCAAGATGGCAT UTI89_C0681 686725 - 687855 + | putative inner membrane protein pdxA 687848 - 688834 + | 4-hydroxythreonine-4-phosphate dehydrogenase 2 TERM 931 689185 - 689214 + G 91 -2.7 -5.47821 | CACATTTACCGCTTC GCGTGATCACCAG CGAC CTGCATATCGCGC TTTTTTTGGCTGAAT TERM 932 689426 - 689412 - g 85 -10 -4.27192 | opp_overlap 689410 AAAGCCGCACTAAAA CGCGAT CTT ATCGCG CATGCTTCGCGCAAA UTI89_C0683 688836 - 689597 + | putative transcriptional regulator TERM 933 690845 - 690833 - g 86 -9.1 -4.42639 | opp_overlap 690827 690837, overlap 690835 AGATCTCAACGAAAA TGCGC CGC GCGCA ATGGCGGTTATCGAT glnS 689817 - 691481 + | glutaminyl-tRNA synthetase TERM 934 691552 - 691568 + F 100 -11.5 -6.04378 | opp_overlap 691552 GCAAACAATCCCAAA CGCCGCG CTC TGCGGCG TTTTTTTTCTGCTTT TERM 935 691568 - 691552 - f 85 -10.8 -3.74238 | opp_overlap 691552 GCAAACAATCCCAAA CGCCGC GCTCT GCGGCG TTTTTTTTCTGCTTT TERM 936 692781 - 692761 - g 74 -8.3 -3.86897 | opp_overlap 692760 692767 GGTACGCGCGATAAA GTTGACGAT CGC AGCGTCAAC GATCTTTATGACGGC TERM 937 692794 - 692820 + G 74 -8.7 -3.90112 | gap 1, overlap 692794 AACGATCTTTATGAC GG-CACCGCCTG GCTG CAGGCGTTGACC TTTGGTTACCGGGCG TERM 938 693043 - 693030 - g 81 -6.7 -4.63527 | GTATGACCTGAAAAA CTGGA ATCT TCCAG GCTTCGCCATCGGCG TERM 939 693189 - 693205 + G 79 -12.3 -3.0464 | CACCATTCAGGACGG TCGTGCC AAG GGCACGA TGTTCAAACTGCATT ybfM 691930 - 693336 + | hypothetical protein ybfN 693386 - 693712 + | lipoprotein YbfN precursor TERM 940 693713 - 693732 + T 80 -5.7 -5.10656 | opp_overlap 693713 693710 693715 AGTAATAACAAATAA GTGAGAG CTGTAA CTCTCGC TTTTCTTATTTTCCT TERM 941 693754 - 693781 + T 77 -11.4 -2.72463 | opp_overlap 693759, overlap 693759 TATTTTCCTTGTATA AAAAAGCCAACC TGCA GGTTGGCTTTTC TCGTTCAGGCTGGCT TERM 942 693776 - 693759 - T 100 -11.3 -5.24129 | opp_overlap 693759 693754 TCCTTGTATAAAAAA GCCAACC TGCA GGTTGGC TTTTCTCGTTCAGGC TERM 943 693759 - 693776 + T 100 -11.3 -4.5442 | opp_overlap 693759, overlap 693754 TCCTTGTATAAAAAA GCCAACC TGCA GGTTGGC TTTTCTCGTTCAGGC fur 694242 - 693796 - | ferric uptake regulator TERM 944 694525 - 694498 - g 100 -16.4 -3.19463 | overlap 694500 GGCATTATCTATTAA TACGGCGTAGAC ATGA GTCTACGCCGCA TCACATCAGGCATTG TERM 945 694523 - 694500 - g 100 -16.8 -3.15996 | overlap 694498 CATTATCTATTAATA CGGCGTAGAC ATGA GTCTACGCCG CATCACATCAGGCAT ybfJ 694287 - 694541 + | hypothetical protein fldA 695178 - 694531 - | flavodoxin FldA TERM 946 694764 - 694780 + g 70 -10.9 -2.78495 | opp_overlap 694763, overlap 694762 TGGTGCCCAATGCAT CGCAGAA GTA TTCTGCG TAATCTTCCTGGTCG ybfE 695563 - 695201 - | LexA regulated protein TERM 947 695580 - 695617 + r 83 -7.6 -4.77157 | gap 1, opp_overlap 695566 695561 695559 695601, overlap 695581 AGCGCGATGAGTCAC GCCAACGTCCACG-CGC GGAAA GCGACGCGGACGCTGGG TTTTTAATCAGTTGC TERM 948 695581 - 695616 + r 81 -11.1 -3.45571 | gap 1, opp_overlap 695561 695559 695601, overlap 695580 GCGCGATGAGTCACG CCAACGTCCACG-CGC GGAAA GCGACGCGGACGCTGG GTTTTTAATCAGTTG ybfF 696398 - 695634 - | hypothetical protein TERM 949 696787 - 696805 + GH 83 -11 -3.60151 | opp_overlap 696786 696787 ACGATTAAAGACAAG GTTCGCGC AAT GCGTGAAC TTCTGCTTTCGGACG seqA 696583 - 697128 + | replication initiation regulator SeqA TERM 950 697189 - 697168 - gT 81 -10.9 -3.42621 | opp_overlap 697163 AATGGCAATCCACAA TCGTGCAGG CCAA CCTGCACAA CAGAGTGATTTGATT pgm 697103 - 698794 + | phosphoglucomutase TERM 951 698833 - 698814 - T 100 -9.2 -5.39905 | opp_overlap 698814 ATCAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTGCTTTGCTT TERM 952 698814 - 698833 + T 100 -11.4 -5.41359 | opp_overlap 698814 ATCAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTGCTTTGCTT potE 700170 - 698851 - | putrescine transporter speF 702374 - 700167 - | ornithine decarboxylase TERM 953 700503 - 700526 + g 77 -6 -4.7153 | overlap 700507 CATGCTGACGCGTGG GAAGTGTTCC TTAC GGAACATCTC TTTTTGCAGTTGTTT TERM 954 701662 - 701648 - G 74 -7.8 -4.03234 | CTGTTTCCAGATAAA CCGGTG TTG CACCAG CCTGTAGCAAGGCCC UTI89_C0696 702531 - 702379 - | hypothetical protein UTI89_C0697 702898 - 703032 + | hypothetical protein kdpE 703731 - 703054 - | DNA-binding transcriptional activator KdpE TERM 955 703100 - 703125 + g 81 -6 -4.83615 | overlap 703102 TCAGTAATAAAATGG CGGGGGCGGG TGGGAT CCTGCTCCAG TTTTTGTCGCAGATG kdpD 706415 - 703728 - | sensor protein KdpD TERM 956 705070 - 705056 - G 73 -11.4 -2.82519 | overlap 705053 TCACCACATTAATGA CGGTGG CAA CCACCG AAGGCCAGCGTCCGT TERM 957 705930 - 705907 - G 74 -2.2 -5.08824 | opp_overlap 705913, overlap 705910 GCGGCATCGAAAAAA GGATCGGGCA CGGT TTCCCGCACC TGAATTCCGGTGACG TERM 958 706082 - 706061 - G 73 -11.6 -2.66692 | opp_overlap 706061, overlap 706060 TAGGATGACGAGAAC CTGGCGCA TTACTG TGCGCCAG TTCGTCCATTAAGAT TERM 959 706061 - 706082 + g 81 -12.3 -3.22091 | opp_overlap 706061 706060 TAGGATGACGAGAAC CTGGCGCAT TACT GTGCGCCAG TTCGTCCATTAAGAT kdpC 707001 - 706405 - | potassium-transporting ATPase subunit C kdpB 709034 - 706986 - | potassium-transporting ATPase subunit B TERM 960 707284 - 707267 - G 77 -9.9 -3.61517 | opp_overlap 707265 ACGCCGCTGGAATAA TGGCGAA GTAT TTCGCCA CATCGTTGGCAATGC TERM 961 708023 - 708041 + g 72 -4.5 -4.72272 | gap 1 CCAGCGAAGCCAGTT GTGC-GGC GTCG GCCAGCGC TTTTTCCTCCACGCC TERM 962 708328 - 708312 - G 74 -7.9 -4.11216 | overlap 708313 GCCCCACGCGGAAAA CGGCCAC AGC GTGGCGG TTGCCAGTAAAAAGA kdpA 710730 - 709057 - | potassium-transporting ATPase subunit A TERM 963 710186 - 710170 - G 82 -2.2 -5.4505 | TTGTTGAATAAAAAA CAGTGC GATCA GCAATG CTACGGGGGTTAACA UTI89_C0703 710933 - 710730 - | hypothetical protein TERM 964 710802 - 710784 - G 77 -3 -5.14163 | opp_overlap 710786, overlap 710786 ACCCAGTAATAAAAA CACCAGCA ACA CGCCGGTT ATCACGCCTGCACTC TERM 965 710932 - 710921 - G 86 -5.8 -5.14894 | opp_overlap 710921 AAAAAAGTATAAAAA TGGC AAAA GCCA TGATTTAACTAATGT ybfA 711132 - 711338 + | hypothetical protein TERM 966 711391 - 711360 - f 100 -13 -3.59087 | opp_overlap 711360 711365, overlap 711365 AACATGACGTTTAAA GAAAACCGCCGGTG GAAA CGCTGGCGGTTTTC TTTTTTCGGCGTCTA TERM 967 711360 - 711391 + F 100 -17.4 -5.04385 | opp_overlap 711360 711365, overlap 711365 AACATGACGTTTAAA GAAAACCGCCGGTG GAAA CGCTGGCGGTTTTC TTTTTTCGGCGTCTA TERM 968 711386 - 711365 - f 83 -7.1 -4.87803 | opp_overlap 711360 711365, overlap 711360 GACGTTTAAAGAAAA CCGCCGGTG GAAA CGCTGGCGG TTTTCTTTTTTCGGC TERM 969 711365 - 711386 + F 100 -11.5 -5.42198 | opp_overlap 711365 711360, overlap 711360 GACGTTTAAAGAAAA CCGCCGGTG GAAA CGCTGGCGG TTTTCTTTTTTCGGC TERM 970 711786 - 711772 - g 82 -11.4 -3.50572 | opp_overlap 711772 ATTGATTCCACAGAA CGCCAG CAG CTGGCG GCGCTTATCGACAGT ybgA 711439 - 711948 + | hypothetical protein TERM 971 712028 - 712078 + G 73 -11.9 -2.69151 | gap 1, opp_overlap 712062, overlap 712008 712024 712025 CTGCCGCAATTCGTC TGCG-CGCGTGCTGGCGTTGTATA TCGC TACACCACGCCAGTGGGCGGCGCA TAATGTGTCGCCGCG TERM 972 712919 - 712909 - g 78 -8.2 -4.15565 | opp_overlap 712909 712908 GGCAGGAGGGCAAAA CGGG ATA CCCG ATTGTCGATGCTGCC phrB 711945 - 713363 + | deoxyribodipyrimidine photolyase TERM 973 713393 - 713355 - T 77 -8.9 -3.81929 | opp_overlap 713351 713346, overlap 713358 GAAGAAGCGAGGAAA GGAGCCTGATAAAACGC AGCGA GCGTTTTATCAGGCATG GTGCTGGCTTATTAA TERM 974 713390 - 713358 - T 100 -19.4 -2.98381 | opp_overlap 713351 713346, overlap 713355 GAAGCGAGGAAAGGA GCCTGATAAAACGC AGCGA GCGTTTTATCAGGC ATGGTGCTGGCTTAT ybgH 714886 - 713405 - | transporter YbgH TERM 975 714086 - 714100 + g 77 -2.8 -5.1417 | opp_overlap 714056 GGTAACAATCAGCCC CAGC TCCTTAC GCTG TTTTTGGTTTTCTGC TERM 976 715698 - 715722 + G 70 -3.5 -4.71426 | gap 1, overlap 715697 715701 AAAGTTTTATCGATA GCG-CCGCGC GTTTTG GCGTGGATGC TTTTATTACTGGCGA ybgI 715157 - 715900 + | putative hydrolase-oxidase ybgJ 715923 - 716579 + | hypothetical protein ybgK 716573 - 717505 + | hypothetical protein TERM 977 717671 - 717688 + G 78 -8.5 -4.25104 | TGGCGCGCACCCGAG TTTTCCC GACA GGGAAAA TTTTGGTCGCAGCGC ybgL 717495 - 718229 + | hypothetical protein nei 718265 - 719056 + | endonuclease VIII abrB 720144 - 719053 - | putative transport protein AbrB ybgO 720625 - 720251 - | hypothetical protein TERM 978 720629 - 720644 + rH 73 -2.6 -5.06103 | opp_overlap 720622, overlap 720631 720635 720636 CAAATCAATCACCAG TGTTTC CGGT GAAATA TTTTTTCACCATTAT TERM 979 720744 - 720719 - RH 84 -7.6 -4.99035 | gap 1 TCAGCCATATAAAAA GAACCCGCTCT ATTAA AG-GCGGGTCC GGAAAGTGAACGGCT gltA 722056 - 720773 - | type II citrate synthase TERM 980 721323 - 721310 - GH 71 -8.1 -3.74077 | TGCGATACAGGCAAA CGGGT TCGC ACCCG AAGAGCCAGCGGTAC UTI89_C0716 722038 - 722229 + | hypothetical protein TERM 981 722366 - 722376 + FH 70 -5.4 -4.32436 | CTTCATAACTTTTAC GCAT TAT ATGC TTTTCCTGGTAATGT TERM 982 722864 - 722875 + G 70 -5.8 -4.1822 | CTCCATCGCGTTTCC GGTG TGAT CACC TTTGTTGCAGTGGGC sdhC 722750 - 723154 + | succinate dehydrogenase cytochrome b556 large membrane subunit sdhD 723148 - 723495 + | succinate dehydrogenase cytochrome b556 small membrane subunit sdhA 723483 - 725261 + | succinate dehydrogenase flavoprotein subunit sdhB 725277 - 725993 + | succinate dehydrogenase iron-sulfur subunit TERM 983 726032 - 725999 - f 79 -11.7 -2.65279 | opp_overlap 726011 726012, overlap 726009 726011 726012 TAATGCGTAAACCCA GGCCTGATAAGACGC GCAA GCGTCGCATCAGGCA ACCAGTGCCGGATGC TERM 984 726012 - 726058 + F 74 -10.7 -2.57931 | opp_overlap 726009 725999 726012 726011 726034 726037, overlap 726011 CAGGCCTGATAAGAC GCGCAAGCGTCGCATCAGGCA ACCAG TGCCGGATGCGGCGTGAACGC CTTATCCGGCCTACA TERM 985 726132 - 726089 - f 100 -12.4 -4.0683 | opp_overlap 726124, overlap 726081 726130 AAAGAAATGCAGAAA CCGTAGGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAAACAG CGCCGGATGCGGCGT TERM 986 726225 - 726185 - f 71 -7.7 -3.83771 | opp_overlap 726185 726186, overlap 726186 AAGAAATGCAGGAAA TCTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAGG TTCCTTAGCGGACGC TERM 987 726224 - 726186 - f 78 -11.2 -2.89178 | opp_overlap 726185 726186, overlap 726185 AGAAATGCAGGAAAT CTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAG GTTCCTTAGCGGACG TERM 988 726913 - 726897 - g 83 -5.1 -5.11063 | opp_overlap 726895 726897, overlap 726880 AGCACTGAAGAAAAA CGCTG GATCCAA CAGCG TATTGAGTCTGGTCG TERM 989 726969 - 726957 - g 100 -7.7 -5.48063 | AGCGAAGAGAAAAAA CGCTT CTT AAGCG AACTGACCGCCGCTG TERM 990 727203 - 727176 - g 71 -2 -5.00616 | gap 1, opp_overlap 727184, overlap 727178 GTGCTGGGTAAAAAA CCGCAAGACTTGT TCG ACGAGT-TTGCCG GTAAACATAAAGAAC kgd 726354 - 729155 + | alpha-ketoglutarate decarboxylase sucB 729170 - 730387 + | dihydrolipoamide acetyltransferase TERM 991 730408 - 730442 + F 81 -10.8 -3.55444 | TAAGCTTCACCTGCA CTGTAGACCGACGT GGATAGG GTGTCGGTCTACGG TTTAAAAGATAACGA TERM 992 730906 - 730886 - g 73 -4 -4.81249 | gap 1 GTGGAAATTGAAAAA GTGGCGGAA GAAA CTCCGC-AC CTGATCCACAAAGTT sucC 730481 - 731647 + | succinyl-CoA synthetase subunit beta sucD 731647 - 732516 + | succinyl-CoA synthetase subunit alpha TERM 993 732574 - 732534 - f 88 -9.1 -4.45068 | opp_overlap 732531 732534 732573, overlap 732536 732537 ATCTGTAATAAGAAA TAGCCCT-CGCCGCTTCCC CCTAC AGGAAG-GGCGAAGGGCTG TCGGTTTCGACATGG TERM 994 732534 - 732574 + F 74 -10.6 -2.64803 | opp_overlap 732534 732536 732537, overlap 732531 732573 ATCTGTAATAAGAAA TAGCCC-TCGCCGCTTCC CCCTACA GGAAG-GGCGAAGGGCTG TCGGTTTCGACATGG TERM 995 732572 - 732536 - f 93 -11.7 -3.82963 | opp_overlap 732534 732531, overlap 732534 732537 CTGTAATAAGAAATA GCCCT-CGCCGCTTCCC CCTAC AGGAAG-GGCGAAGGGC TGTCGGTTTCGACAT TERM 996 732570 - 732537 - f 80 -11.8 -2.89055 | gap 1, opp_overlap 732534 732531, overlap 732536 732534 TGTAATAAGAAATAG CCCTCGCCGCTTCCC CCTAC AGGAAG-GGCGAAGG GCTGTCGGTTTCGAC TERM 997 732592 - 732609 + F 100 -11.3 -5.4505 | GGTTTCGACATGGTT GGCCATC TTAT GATGGCC TTTTTTATTCGGGCA TERM 998 733547 - 733529 - gf 76 -7.4 -4.18197 | ACCTGCGATGCAAAA CAGTGGAG ATA CTCAACTG GCAAGAAAATATAAT UTI89_C0725 732756 - 733871 + | hypothetical protein TERM 999 734010 - 733999 - gTf 71 -3 -4.84492 | opp_overlap 733999 TTAATGATAATAAAA CATA TTCT TATG TTATTTAATCACGAA UTI89_C0726 733753 - 734097 + | hypothetical protein TERM 1000 734850 - 734863 + TF 74 -3.9 -4.99435 | CATATGTGGTTGATT TTGAT ATAA ATCAA TTTTTAATTCTTGAA UTI89_C0728 737954 - 736674 - | hypothetical protein cydA 735198 - 736769 + | cytochrome d terminal oxidase, polypeptide subunit I cydB 736785 - 737924 + | cytochrome d terminal oxidase polypeptide subunit II UTI89_C0730 737939 - 738052 + | hypothetical protein TERM 1001 738087 - 738114 + G 81 -12.1 -3.21595 | gap 1, opp_overlap 738093, overlap 738093 CTTGTATGCGGTAAT GGACAAGCGCCC CCTGC GGGCGCTT-TCC TTCGTGATGGCACTT TERM 1002 738109 - 738093 - g 76 -10.8 -3.41878 | opp_overlap 738087 738093 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 1003 738093 - 738109 + G 86 -10.8 -3.97042 | opp_overlap 738093, overlap 738087 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 1004 738270 - 738283 + G 77 -3.1 -5.055 | TCGTCCGCAGAAGGT TCTCT GGCA AGGGA TTTTTTGCCCATTGC ybgE 738052 - 738345 + | hypothetical protein TERM 1005 738391 - 738366 - f 100 -12 -4.57341 | opp_overlap 738366 AATTCTCTTTAAAAA TTTATGGGCC GAGTCA GGCCCATAAA TTTTTACGCTCCCTT TERM 1006 738366 - 738391 + F 100 -12 -4.63184 | opp_overlap 738366 AATTCTCTTTAAAAA TTTATGGGCC GAGTCA GGCCCATAAA TTTTTACGCTCCCTT ybgC 738495 - 738899 + | acyl-CoA thioester hydrolase YbgC tolQ 738896 - 739588 + | colicin uptake protein TolQ tolR 739592 - 740020 + | colicin uptake protein TolR TERM 1007 740455 - 740438 - g 74 -3.4 -4.93296 | gap 1, overlap 740441 TCAGGAGCAGAAAAA GCAGGCT GAAGA AGCC-GC AAAACAGGCCGAGTT TERM 1008 740659 - 740640 - g 87 -4.8 -5.27923 | GAAGCGCAGAAAAAA GCCGAGGC TGCT GCTGCGGC GCTGAAGAAGAAAGC TERM 1009 740698 - 740673 - g 85 -8.9 -4.44667 | overlap 740689 740691 GCGCTGAAGAAGAAA GCTGAAGCGGC AGAA GCAGCTGCAGC TGAAGCAAGAAAGAA TERM 1010 740804 - 740777 - g 77 -8.4 -4.07687 | overlap 740764 740796 AGCGGCTGCTGAAAA GGCTGCAGCT GATAAGAA AGCGGCAGCC GACAAAAAAGCAGCA TERM 1011 740833 - 740814 - g 87 -4.9 -5.26316 | overlap 740815 740826 740827 GCAGCCGACAAAAAA GCAGCAG AAAAAG CGGCTGC TGAAAAGGCAGCAGC TERM 1012 740848 - 740826 - g 83 -6.2 -4.95806 | overlap 740814 740815 740827 740844 AAAGCAGCAGAAAAA GCGGCTGC TGAAAAG GCAGCAGC TGATAAGAAAGCAGC TERM 1013 740881 - 740859 - g 90 -9.8 -4.32177 | overlap 740844 740874 740876 GCAGCTGATAAGAAA GCAGCGGC AGAAAAA GCCGCCGC AGACAAAAAAGCGGC TERM 1014 740899 - 740874 - g 85 -6.8 -4.84359 | overlap 740859 740876 740892 GCAGCGGCAGAAAAA GCCGCCGC AGACAAAAAA GCGGCAGC GGCAAAAGCAGCAGC TERM 1015 740944 - 740892 - g 100 -8.2 -5.36441 | opp_overlap 740937, overlap 740874 740876 740907 740922 740937 740938 GCCGCAGACAAAAAA GCGGCAGCGGCAAAAGCAGCAGCT GAAAA AGCCGCTGCAGCAAAAGCTGCCGC AGAGGCAGATGATAT TERM 1016 740929 - 740907 - g 91 -11.3 -4.11216 | overlap 740892 740922 GCGGCAGCGGCAAAA GCAGCAGCT GAAAA AGCCGCTGC AGCAAAAGCTGCCGC TERM 1017 740950 - 740922 - g 100 -13.1 -4.63527 | opp_overlap 740937, overlap 740907 740892 740937 740938 GCAGCAGCTGAAAAA GCCGCTGCAGCAA AAG CTGCCGCAGAGGC AGATGATATTTTCGG tolA 740085 - 741335 + | cell envelope integrity inner membrane protein TolA tolB 741465 - 742760 + | translocation protein TolB UTI89_C0737 743346 - 742729 - | hypothetical protein pal 742771 - 743316 + | peptidoglycan-associated outer membrane lipoprotein TERM 1018 743380 - 743396 + GH 100 -15.1 -4.25104 | TTACTGGTTGGTATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCACC TERM 1019 743578 - 743565 - gH 70 -5.3 -4.29738 | TCAGATTCAGGAAAA TCAGT ATCA ACTGA ATCAGGTCGTGGAGC ybgF 743326 - 744117 + | hypothetical protein TERM 1020 744160 - 744125 - fH 73 -9.1 -3.4285 | opp_overlap 744129, overlap 744127 CGATGTAATGCATAA CACACGACCAGAAGT CGCATT ATTTCTGGTCGTGTC GTGCGAATCATAAGC TERM 1021 744158 - 744127 - fH 85 -11.7 -3.28368 | opp_overlap 744129, overlap 744125 ATGTAATGCATAACA CACGACCAGAAGT CGCATT ATTTCTGGTCGTG TCGTGCGAATCATAA TERM 1022 744129 - 744156 + FH 74 -10.7 -2.79302 | opp_overlap 744127 744125 GTAATGCATAACACA CGACCAGAAGT CGCATT ATTTCTGGTCG TGTCGTGCGAATCAT TERM 1023 745019 - 744987 - fH 100 -15.7 -3.19463 | opp_overlap 744988 744996, overlap 744988 744996 TGCACGACCCACCAA TGCAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATTCAGGCATCTCTC TERM 1024 745018 - 744988 - fH 100 -19.2 -2.51464 | opp_overlap 744988 744996, overlap 744987 744996 GCACGACCCACCAAT GCAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATTCAGGCATCTCT TERM 1025 744988 - 745018 + FH 100 -18.5 -3.0395 | opp_overlap 744988 744987 744996, overlap 744996 GCACGACCCACCAAT GCAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATTCAGGCATCTCT TERM 1026 745010 - 744996 - fH 93 -9.2 -5.17576 | opp_overlap 744988 744996, overlap 744988 744987 CACCAATGCAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATTCAG TERM 1027 744996 - 745010 + FH 95 -8.5 -5.27779 | opp_overlap 744996 744988 744987, overlap 744988 CACCAATGCAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATTCAG nadA 745263 - 746306 + | quinolinate synthetase TERM 1028 747054 - 747024 - g 100 -15.5 -3.15544 | CCGGATGTGGATCAA CAGCGCACGCGAA AGAGG TTCACGCGCGCTG TCCCATTAATGGTGA pnuC 746344 - 747063 + | PnuC NMN transporter UTI89_C0749 748001 - 747060 - | zinc transporter ZitB TERM 1029 747706 - 747695 - G 70 -4.4 -4.53034 | CCCAGACAATCAAAA TGGT AATC ACCA CCAGGGCGATAGCAT TERM 1030 748093 - 748074 - R 90 -9.3 -4.78661 | opp_overlap 748073 748074 AGGGAAAAATTAAAA GGGAGAG ACTCCG CTCTCCC ATTATTGGCTATTTT UTI89_C0750 748495 - 748115 - | putative homeobox protein TERM 1031 748674 - 748686 + H 74 -3.3 -5.16071 | AGATCTCGTTTTTCG CGACA ATC TGGCG TTTTTCTTGCTAATT aroG 748811 - 749863 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1032 749858 - 749848 - T 71 -8.2 -3.794 | overlap 749849 GGCGAATGCAGTAAA CGCG CGT CGCG GGTAAAGTTTAATTG TERM 1033 749874 - 749903 + T 91 -12.9 -3.14132 | GGTAAAGTTTAATTG TCGGATGCGCCGT CAGA GTGGCGTATCCGA TTAATCACCGGAGGC TERM 1034 750011 - 749976 - T 100 -11.4 -4.90266 | gap 1, opp_overlap 749976 749983, overlap 749983 GGTAGCAACGAAAAA TAAAAAAGCCGACT-CA TTT TGCAGTCGGCTTTCTCA TTTTTAAGCGAATGA TERM 1035 749976 - 750011 + T 77 -7 -4.57569 | gap 1, opp_overlap 749976 749983, overlap 749983 GGTAGCAACGAAAAA TAAAAAAGCCGACT-CA TTT TGCAGTCGGCTTTCTCA TTTTTAAGCGAATGA TERM 1036 750004 - 749983 - T 100 -9.5 -5.95286 | gap 1, opp_overlap 749976 749983, overlap 749976 ACGAAAAATAAAAAA GCCGACT-CA TTT TGCAGTCGGC TTTCTCATTTTTAAG TERM 1037 749983 - 750004 + T 84 -9.5 -4.2687 | gap 1, opp_overlap 749983 749976, overlap 749976 ACGAAAAATAAAAAA GCCGACT-CA TTT TGCAGTCGGC TTTCTCATTTTTAAG gpmA 750797 - 750030 - | phosphoglycerate mutase 1 TERM 1038 750154 - 750140 - G 81 -9.2 -4.02132 | CGTCAAACTCATAAA CCAGCG GCA CGCCGG TCGGGATATTCAGCT TERM 1039 750472 - 750482 + g 78 -8.2 -4.1552 | TCGCCATACTTTTCA GCGG TTT CCGC TTTGTTCAGACCCTG TERM 1040 750650 - 750665 + g 74 -6.1 -4.45664 | overlap 750648 AACCTTCCTCTTTCA GCAGC TTACCT GCTGC TTTTGCTTCGCTTAC TERM 1041 750978 - 750962 - R 85 -10.1 -4.27467 | CAATATGAAGATAAA GCCCTCA TGA CGAGGGC TTAACATTACTGAGC galM 752025 - 750985 - | aldose 1-epimerase galK 753167 - 752019 - | galactokinase galT 754217 - 753171 - | galactose-1-phosphate uridylyltransferase TERM 1042 754004 - 754020 + g 81 -6.5 -4.8667 | overlap 754005 TAGTGAAAACGTAAG TCCCGGT GTA ATCGGGG TTTTTATCGCCTGTC UTI89_C0756 755243 - 754227 - | UDP-galactose-4-epimerase TERM 1043 754481 - 754496 + g 77 -6.1 -4.65895 | TGTAGATGTGTACGC CTGGC TTGTTC GCCAG TTTTTCCATCGCCAC TERM 1044 754731 - 754748 + g 70 -4.1 -4.60041 | gap 1, overlap 754733 754734 GCGCAGCAGGGCAAT GCTCCAGT CCG GCTGG-GC TTTTTGCAGATCGGT modF 756978 - 755506 - | putative molybdenum transport ATP-binding protein ModF TERM 1045 756204 - 756177 - G 75 -7.1 -4.31433 | gap 1, opp_overlap 756177 756180 GATCGTTATAAGAAA CCACGCCATTGT TCAGC ACAAT-GCGCGG TTCGTTGGCGGGTAA TERM 1046 756539 - 756514 - G 84 -11.1 -3.78124 | opp_overlap 756534 ATCAAGGATCAACAA GTCAGGCTCCG ACAT CAGCGCCTGAC ACAGCAGGGTTTTTC modE 757834 - 757046 - | DNA-binding transcriptional regulator ModE TERM 1047 757136 - 757152 + g 81 -10.9 -3.57462 | CGCTTCATTTACCGG CACTGTG GCG CACAGTG TTTGCCCGTCGGGTA ybhT 757957 - 758112 + | hypothetical protein TERM 1048 758122 - 758139 + GF 100 -8.4 -5.35224 | CATTGATTCCCTGAA TGCCCG CTTAGT CGGGCA TTTTCTTTTTCTCAA UTI89_C0760 758048 - 758257 + | hypothetical protein TERM 1049 758904 - 758894 - g 72 -6.8 -4.17491 | AGCAAAGGGGTAAAA GTGG TTG CCAC CTTCCCGGAAGATTC modA 758279 - 759052 + | molybdate transporter periplasmic protein TERM 1050 759444 - 759457 + G 76 -3.7 -4.97158 | opp_overlap 759436, overlap 759440 AAGAACACTGGGGGC CGGGC GCTG GCGCG TTTTCTTTACTATCA modB 759052 - 759741 + | molybdate ABC transporter permease protein modC 759744 - 760802 + | molybdate transporter ATP-binding protein TERM 1051 760815 - 760795 - T 74 -9.7 -3.2964 | AAAGTGTGTCGATAA CCGCCTGAT TAA ATCAGGTGG CTATAAATGAACTGG ybhA 761621 - 760803 - | phosphotransferase ybhE 761776 - 762771 + | 6-phosphogluconolactonase TERM 1052 762784 - 762807 + T 93 -15.3 -3.10053 | opp_overlap 762784 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT TERM 1053 762807 - 762784 - T 93 -15.3 -3.06133 | opp_overlap 762784 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT ybhD 763828 - 762812 - | transcriptional regulator YbhD TERM 1054 764975 - 765005 + G 71 -3.3 -4.81814 | opp_overlap 764975, overlap 764975 ACGACCAGAAAAATA TTTTCCGGTGAAG TTTAT CTTCCCTGAAAAA TTTTGTTGTCGTGAT ybhH 763949 - 765001 + | hypothetical protein TERM 1055 765061 - 765041 - f 87 -11.3 -3.69809 | TACTCAATAAAGGAA TTCTGTATG AGT CATACAGAA AGAACAGGATATTAA TERM 1056 765343 - 765355 + G 70 -4.8 -4.51799 | TTACTCTTCCGGTAC CACC TGGCT GGTG TTTTCTGCGTTTACT ybhI 765077 - 766510 + | hypothetical protein TERM 1057 766654 - 766677 + F 86 -13.2 -2.89055 | TCCATTTATTATCTT TCTGCGCACT TCAC GGTGCGCAGA TATCTGGAGCATTTG TERM 1058 766728 - 766714 - g 81 -7 -4.63184 | AAGTTATCTGAAAAA GGCGTG TTT CTCGCC AGCAATAACGAAATA TERM 1059 766806 - 766795 - g 100 -5.8 -5.71638 | opp_overlap 766795 GAAGAAGCAAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT ybhJ 766693 - 768954 + | hypothetical protein ybhC 770378 - 769095 - | putative pectinesterase TERM 1060 770523 - 770497 - R 86 -13.8 -2.53759 | opp_overlap 770494, overlap 770502 770504 AATACCTTTAAGTGA TACCAGATGGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA ybhB 771006 - 770530 - | putative kinase inhibitor protein bioA 772465 - 771065 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 1061 771380 - 771392 + gH 77 -9.1 -3.78775 | opp_overlap 771379 771380 GCCAGATTCAAGAAT CGCCA GGC TGGCG TTTGCTGCTGCGCAG TERM 1062 772862 - 772879 + GH 70 -10.5 -2.58714 | AATCTCAAGCGCAGC GCCTGGC GAAT GCCGGGC TGGATTACTATAACC TERM 1063 773439 - 773413 - gH 86 -10.8 -3.8591 | overlap 773416 GGCGATAACGAACAA CAGCAGCGTCTG GAG CAGGCGCTGATG ACCCCGGACACTGAC TERM 1064 773436 - 773416 - gH 74 -11.1 -2.70018 | overlap 773413 GATAACGAACAACAG CAGCGTCTG GAG CAGGCGCTG ATGACCCCGGACACT bioB 772441 - 773481 + | biotin synthase TERM 1065 773501 - 773521 + GFH 72 -9.6 -3.17794 | opp_overlap 773498 773497 773501, overlap 773499 GCAGGAGAAAATCGA CGCGGCGC TTGAT GCGCGGCG TGTTGCTGATGCCTT TERM 1066 773650 - 773680 + GFH 80 -11.8 -2.90573 | opp_overlap 773650 773653, overlap 773650 773653 GCCATCATCCGCAAA TTATCCGCGCCTGG CAG CAGGGCGCGGATCA ATTTGGTGTCGGTAG TERM 1067 773650 - 773681 + GFH 80 -10.2 -3.84825 | gap 1, opp_overlap 773650 773653, overlap 773650 773653 GCCATCATCCGCAAA TT-ATCCGCGCCTGG CAG CAGGGCGCGGATCAA TTTGGTGTCGGTAGC TERM 1068 773680 - 773650 - gfH 81 -10.5 -3.58343 | gap 1, opp_overlap 773650 773650 773653, overlap 773653 GCCATCATCCGCAAA TTATCCGCG-CCTG GCAG CAGGGCGCGGATCA ATTTGGTGTCGGTAG TERM 1069 773653 - 773677 + GFH 86 -13.5 -2.69601 | opp_overlap 773650 773653, overlap 773650 773650 ATCATCCGCAAATTA TCCGCGCCTGG CAG CAGGGCGCGGA TCAATTTGGTGTCGG TERM 1070 773677 - 773653 - gfH 80 -12.2 -2.91873 | gap 1, opp_overlap 773653 773650 773650, overlap 773650 ATCATCCGCAAATTA TCCGCG-CCTG GCAG CAGGGCGCGGA TCAATTTGGTGTCGG bioF 773478 - 774632 + | 8-amino-7-oxononanoate synthase bioC 774580 - 775374 + | biotin biosynthesis protein BioC bioD 775367 - 776044 + | dithiobiotin synthetase TERM 1071 776840 - 776825 - g 72 -4.6 -4.63218 | opp_overlap 776826, overlap 776826 TTGCGCCCAACAAAA CGCTGG CGGC CCAGCT GTATGGCGAAATGAA TERM 1072 777382 - 777362 - g 70 -6.7 -4.14739 | CCATCTACCCGAAAA CGCACTACG TCA CGCCGCGCG AGCGCATCGTACAGG TERM 1073 777431 - 777421 - g 70 -6.8 -4.1421 | GAGATCAAAGAAGAA CTGG CCG CCAG ACGCAAAGTGCTGTT uvrB 776623 - 778644 + | excinuclease ABC subunit B TERM 1074 778682 - 778650 - T 78 -10.6 -3.21276 | opp_overlap 778653 778657, overlap 778653 778657 CGCGTCGTGACAAGA TGACGAAGCCGGAA TATTC TTCCGGCTTCGTGT TAACCTAAAGCCTGT TERM 1075 778653 - 778679 + T 100 -16.7 -3.05844 | opp_overlap 778650 778653 778657, overlap 778657 GTCGTGACAAGATGA CGAAGCCGGAA TATTC TTCCGGCTTCG TGTTAACCTAAAGCC TERM 1076 778679 - 778653 - T 100 -16.7 -2.80074 | opp_overlap 778653 778657, overlap 778650 778657 GTCGTGACAAGATGA CGAAGCCGGAA TATTC TTCCGGCTTCG TGTTAACCTAAAGCC TERM 1077 778657 - 778675 + T 76 -10.3 -3.37245 | opp_overlap 778653 778650 778657, overlap 778653 TGACAAGATGACGAA GCCGGAA TATTC TTCCGGC TTCGTGTTAACCTAA TERM 1078 778675 - 778657 - T 76 -10.3 -3.29381 | opp_overlap 778657 778653, overlap 778653 778650 TGACAAGATGACGAA GCCGGAA TATTC TTCCGGC TTCGTGTTAACCTAA ybhK 779650 - 778682 - | hypothetical protein UTI89_C0779 779988 - 779833 - | hypothetical protein moaA 779906 - 780976 + | molybdenum cofactor biosynthesis protein A UTI89_C0782 781743 - 781252 - | hypothetical protein moaB 780998 - 781510 + | molybdopterin biosynthesis, protein B moaC 781513 - 781998 + | molybdenum cofactor biosynthesis protein C moaD 781991 - 782236 + | molybdopterin synthase small subunit MoaE 782238 - 782690 + | molybdopterin synthase large subunit UTI89_C0787 783594 - 783463 - | hypothetical protein ybhL 782827 - 783531 + | hypothetical protein TERM 1079 783551 - 783569 + gF 100 -8.1 -6.13503 | opp_overlap 783551 783549 TTTTCACCATCAATA TCCCGGC CATGT GTCGGGA TTTTTTTTCTTACTA ybhM 783710 - 784450 + | hypothetical protein ybhN 785442 - 784486 - | hypothetical protein TERM 1080 785191 - 785205 + g 90 -11.4 -3.86015 | opp_overlap 785181 785179 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA ybhO 786683 - 785442 - | cardiolipin synthase 2 ybhP 787441 - 786680 - | putative DNase TERM 1081 787879 - 787921 + G 71 -9 -3.44848 | overlap 787879 787881 787884 AAACAACTTTGTGCT GGCGATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTAGTG TCTTTGCTGGCGAAA TERM 1082 787881 - 787919 + G 95 -13.8 -3.29704 | overlap 787879 787879 787884 ACAACTTTGTGCTGG CGATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTAG TGTCTTTGCTGGCGA TERM 1083 787884 - 787916 + G 85 -14.1 -2.82279 | overlap 787881 787879 787879 ACTTTGTGCTGGCGA TTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGG TAGTGTCTTTGCTGG ybhQ 787574 - 787984 + | hypothetical protein ybhR 789052 - 787946 - | hypothetical protein TERM 1084 788878 - 788912 + g 70 -10 -3.21912 | GTTCTACCGAGTGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTGGTCACTTCCAGC ybhS 790196 - 789063 - | hypothetical protein TERM 1085 789323 - 789298 - G 72 -6.2 -4.40358 | gap 2, opp_overlap 789303, overlap 789288 789285 789300 ATCGACGGCAGAAAA GCCGCGTTCAGG GCCA CCTGA--GCGGC GTTGAACTGGTTGCG ybhF 791940 - 790189 - | putative ABC-type transport protein YbhF TERM 1086 791045 - 791029 - G 70 -5.1 -4.41302 | CAGCAAATCAATAAA CGCATCT TCA AAACGCG GCGTAGTTTCGTTGA TERM 1087 791685 - 791704 + g 81 -6.4 -4.7373 | gap 1, opp_overlap 791677 GCATATAGCCGAGCA CGGCG-TGC AGC GCAGCGTCG TTTTTGATCGGATCA ybhG 792916 - 791918 - | hypothetical protein TERM 1088 792093 - 792103 + g 72 -6.8 -4.15044 | ACGAAACCAATCTGC CCGT GAT ACGG TTTGTTCGGACGACC ybiH 793599 - 792916 - | putative DNA-binding transcriptional regulator TERM 1089 793530 - 793542 + g 81 -4.8 -5.09173 | opp_overlap 793516 ACTGTGCCAGTGCCG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 1090 793600 - 793623 + H 74 -9.8 -3.36878 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCCATAGG rhlE 793816 - 795177 + | ATP-dependent RNA helicase RhlE TERM 1091 795296 - 795327 + TF 77 -10 -3.53012 | opp_overlap 795306, overlap 795297 GTGCATGTTTTTGTA GGCCGGATAAGGCG CTCG CGCCGCATCCGGCA TTTCACAACAAGCAC TERM 1092 795297 - 795326 + TF 86 -13.5 -2.71712 | opp_overlap 795306, overlap 795296 TGCATGTTTTTGTAG GCCGGATAAGGCG CTCG CGCCGCATCCGGC ATTTCACAACAAGCA UTI89_C0801 795715 - 795410 - | hypothetical protein TERM 1093 795969 - 795946 - gH 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT AAGT ACCGCCAACG TGGCATTGCAGGATC dinG 795714 - 797864 + | ATP-dependent DNA helicase DinG TERM 1094 797847 - 797860 + FH 72 -9.5 -3.25223 | opp_overlap 797843 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 1095 797920 - 797947 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 797918 797916 797920 797939 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC ybiB 797892 - 798854 + | hypothetical protein TERM 1096 798866 - 798889 + F 100 -12.5 -4.07568 | TTAATTTTTATCTCA GCCGGATGA GCCATG TCATCCGGC TTTTACCCCACCGCA ybiC 798995 - 800080 + | hypothetical protein TERM 1097 800107 - 800086 - T 100 -13.7 -5.47821 | AGCCAGCTAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT TERM 1098 800243 - 800291 + T 83 -11.6 -3.37796 | opp_overlap 800241 800243 800244, overlap 800231 800244 GTAGGTCTGATAAGA CGCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 1099 800244 - 800290 + T 89 -15.1 -2.62463 | opp_overlap 800241 800243 800244, overlap 800231 800243 TAGGTCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG TERM 1100 800290 - 800244 - T 74 -10.7 -2.5294 | opp_overlap 800231 800244 800243, overlap 800241 800243 TAGGTCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG ybiJ 800568 - 800308 - | hypothetical protein TERM 1101 800384 - 800394 + g 74 -8.2 -3.8709 | TATCCACTGGCACCG GCCG CCG CGGC TTTCTCAGCCAGTTT TERM 1102 800441 - 800459 + g 71 -3.1 -4.79657 | overlap 800427 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 1103 800618 - 800633 + r 83 -4 -5.40072 | overlap 800619 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTACGAGAGA UTI89_C0806 801099 - 800833 - | hypothetical protein ybiX 801886 - 801173 - | putative hydroxylase TERM 1104 801242 - 801252 + g 77 -8.2 -4.08767 | overlap 801240 GATCTCTTCACTTTC GCCG TAG CGGC TTTTCAGCGACTGAA TERM 1105 801884 - 801867 - G 100 -12.7 -4.58283 | opp_overlap 801864 CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ACCGATTTTTAACAG ybiL 804348 - 802066 - | catecholate siderophore receptor Fiu TERM 1106 802633 - 802653 + g 70 -3.9 -4.70879 | AACCTGCCATTTGGT GCCAATCTC GCT GGTGTTGGC TTTTTGCGGTTTAAA TERM 1107 803675 - 803690 + g 74 -2.4 -5.03145 | TTTTTGACTTTGTCG CGTCCG GCAT CGTGCG TTTTTTCGCCCATTA TERM 1108 804007 - 803997 - G 70 -6.8 -4.0371 | CACCGCGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 1109 804058 - 804040 - G 81 -4.4 -5.03314 | opp_overlap 804048, overlap 804044 CTCACCCGCAAAAAA CGCACCCA CGC CGGGGACG TTTTTGAGCGCGTCG TERM 1110 804443 - 804488 + r 76 -6.4 -4.52857 | gap 1, overlap 804444 ATCCCGTGATAGCGT CCGTG-CAAGTGATAATAATT TTGAT AAGTATTATCACTTGGCGCGA TTTTCTATCACCCAT TERM 1111 804444 - 804487 + r 74 -9.9 -3.31232 | gap 1, overlap 804443 TCCCGTGATAGCGTC CGTG-CAAGTGATAATAATT TTGAT AAGTATTATCACTTGGCGCG ATTTTCTATCACCCA TERM 1112 804598 - 804577 - R 74 -7.3 -4.29432 | opp_overlap 804577 CAAATCGGACGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT ybiM 805017 - 804613 - | hypothetical protein TERM 1113 804681 - 804699 + g 71 -3 -4.86033 | overlap 804682 TAATGACATAACCTT TCGCGC CTTGTTC GCGCGC TTTTTCTGCCAGTTT TERM 1114 804855 - 804865 + g 71 -3.2 -4.77036 | CGGTGGCAATCAGTA GTGT GAG GCAC TTTTTCATAATGACA TERM 1115 805375 - 805402 + G 72 -8.4 -3.71552 | gap 1 TCCCGGACGGTTTTC TCTGCCC-ACCAG TAC CGGGTCGGGCGGA TTATATTCATCACCT ybiN 805059 - 806075 + | putative SAM-dependent methyltransferase ybiO 808297 - 806072 - | hypothetical protein TERM 1116 808146 - 808159 + g 100 -4.5 -6.11243 | gap 1, overlap 808138 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTTGTTCGAT glnQ 809136 - 808414 - | glutamine ABC transporter ATP-binding protein glnP 809792 - 809133 - | glutamine ABC transporter permease protein glnH 810677 - 809931 - | glutamine ABC transporter periplasmic protein UTI89_C0815 811016 - 810723 - | hypothetical protein TERM 1117 810863 - 810821 - G 79 -12.8 -3.06315 | opp_overlap 810828 810862, overlap 810858 GCAATACCCTGAAGA TGCACCATTCTGGGGCACCA AAC TGGTGCGCTAAAATTGTGCA CTCAACACAGTGATT TERM 1118 810924 - 810905 - G 79 -3.6 -5.16237 | opp_overlap 810905 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATGTGGAT TERM 1119 811018 - 811040 + r 80 -7.6 -4.52047 | opp_overlap 811019, overlap 811019 GGGCTACAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGTGTACTA TERM 1120 811019 - 811039 + r 80 -11.1 -3.30505 | opp_overlap 811019, overlap 811018 GGCTACAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGTGTACT TERM 1121 811039 - 811019 - R 100 -13.3 -5.18371 | opp_overlap 811019 811018 GGCTACAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGTGTACT dps 811677 - 811081 - | DNA starvation/stationary phase protection protein Dps TERM 1122 811488 - 811503 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTGTC TERM 1123 811742 - 811756 + r 72 -5.8 -4.50627 | AGTTAGATATATTGA TAAGAA CAA TTCTTA TTTATTTGCTCGCTA TERM 1124 811873 - 811846 - R 100 -15.8 -4.45517 | opp_overlap 811842 AAAGTAGCGAGAAAA TCTGCATGGTTA TGCA TAACCATGCAGA AATGTAAATTTAATT ybiF 812782 - 811883 - | threonine and homoserine efflux system TERM 1125 812962 - 812946 - H 79 -9.5 -3.72315 | opp_overlap 812946 812945, overlap 812944 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 813117 - 813638 + | outer membrane protein X TERM 1126 813677 - 813660 - T 100 -8.4 -5.36441 | opp_overlap 813660 CGGTGATATAAAAAA TCCGCC TCTCGG GGCGGA TTTTTTTGTTTTAAG TERM 1127 813660 - 813677 + T 100 -9.1 -6.09196 | opp_overlap 813660 CGGTGATATAAAAAA TCCGCCT CTCG GGGCGGA TTTTTTTGTTTTAAG ybiP 815271 - 813688 - | hypothetical protein TERM 1128 814087 - 814112 + g 70 -4.7 -4.50159 | TAAATTGTCTGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTCGATTGCA TERM 1129 815242 - 815227 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGATTCTTTG TERM 1130 815522 - 815545 + r 72 -8.1 -3.8709 | opp_overlap 815524, overlap 815524 ATAAAAGCAGGAGTG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCGGAAGGTTT TERM 1131 815524 - 815543 + r 81 -10.7 -3.52113 | opp_overlap 815524, overlap 815522 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT TERM 1132 815543 - 815524 - R 76 -10.7 -3.12803 | opp_overlap 815522 815524 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT UTI89_C0820 815671 - 815543 - | hypothetical protein mntR 815857 - 816324 + | manganese transport regulator MntR TERM 1133 816582 - 816594 + G 70 -6.9 -4.04319 | ATGTTTATGGTACTG GCGGC AGC GCTGC TTTCTACCTTTCTGA ybiR 816321 - 817439 + | hypothetical protein TERM 1134 817476 - 817458 - T 91 -8.8 -4.98531 | opp_overlap 817458 CTGTCAAATTAAAAA GGCGGATT ATG AGTCCGCC TTTGCTTTACGTTTT TERM 1135 817458 - 817476 + T 86 -11 -4.13183 | opp_overlap 817458 CTGTCAAATTAAAAA GGCGGATT ATG AGTCCGCC TTTGCTTTACGTTTT ybiS 818417 - 817497 - | hypothetical protein ybiT 818636 - 820228 + | ABC transporter ATP-binding protein TERM 1136 820268 - 820233 - T 87 -14.3 -2.57244 | gap 1, opp_overlap 820236, overlap 820229 GGATCGAGTAAGTTA TTATCAGTAGCCCTGA TATGG TCAGGGCTACTGA-AA CTGATGACAAACGCA TERM 1137 820377 - 820366 - T 70 -7.2 -3.9392 | TTGTATGCCAAATAA GGCG GTCA CGCC GTATCCGGCATAATG ybiV 821243 - 820428 - | hypothetical protein ybiW 823821 - 821389 - | putative formate acetyltransferase 3 TERM 1138 821676 - 821688 + g 71 -9.1 -3.53012 | opp_overlap 821674 CGCCGCCGAGAATTG CTGCC GTA GGCAG TTTACCCACCGAGCC TERM 1139 823338 - 823358 + g 71 -11.1 -2.87051 | overlap 823320 823337 CCAGGTGCGCATCGC CGGAGGTCA TAT TGCCCTCCG CTTTAATGATGCCGG TERM 1140 823372 - 823386 + g 71 -2.8 -4.77438 | opp_overlap 823368 CGCTTTAATGATGCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT UTI89_C0827 824753 - 823827 - | putative pyruvate formate-lyase 3 activating enzyme TERM 1141 824088 - 824105 + g 83 -5.5 -5.11033 | overlap 824089 GCGGATAATGATTTT TTTGCCG GCTG CGGCGAG TTTTTTCAGGTTATC UTI89_C0828 824857 - 825519 + | fructose-6-phosphate aldolase TERM 1142 825503 - 825532 + T 70 -10.1 -2.6627 | gap 1, opp_overlap 825509, overlap 825497 825502 GGCAAGGAGCGTTTG GCAGAACGT-CGAT TTA ACCGGACGTTCTGC ATTCTCATAAATTGC TERM 1143 825552 - 825572 + T 81 -11.1 -3.50393 | TCATAAATTGCTGAT GACGTGGCG GAG TGCCGCGTC TTATCTGGCCTGGAG moeB 826344 - 825595 - | molybdopterin biosynthesis protein MoeB TERM 1144 825683 - 825714 + g 79 -10.1 -3.79668 | opp_overlap 825675 TACATCACGATTTTT CCGCTGGCAGGTT TGCCAT AACCGGCCAGCAG TTTAATCGCTTCCAT moeA 827579 - 826344 - | molybdopterin biosynthesis protein MoeA TERM 1145 826688 - 826676 - G 78 -10.5 -3.53444 | TCAGCGTCGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 1146 826882 - 826872 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGGGGATCGT TERM 1147 827046 - 827036 - G 87 -4.6 -5.252 | CACCGGTAGAAAAAA GCGC TAC ACGC ACTTTACGAATCACC TERM 1148 827488 - 827476 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG AAC CAGTG GCAGCGTTTCCTGGG TERM 1149 828460 - 828448 - gH 75 -9.1 -3.65224 | opp_overlap 828447 828448 ATGCTATGCCAATAA CGCCA GTG TGGCG GTTTCCTGTACCGGT ybiK 827783 - 828748 + | L-asparaginase TERM 1150 829028 - 829056 + GF 70 -9.5 -2.84325 | opp_overlap 829027 829028 GAGTGCTGCACAAAT GCGCCATGTGCGC GGG GCGGATATGGCGA TGATATTTCAGGAGC TERM 1151 829263 - 829239 - gf 81 -11.4 -3.15544 | opp_overlap 829235 829253 CGTTATCCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG UTI89_C0832 828627 - 830606 + | glutathione transporter ATP-binding protein TERM 1152 831847 - 831881 + GF 72 -10 -2.88427 | CGGATGTTCTACACT GGCTGGTCGGCTTC AACCGGC GAAGCCGACTGGGC TCTATCGCCGCTGTT TERM 1153 832094 - 832078 - gf 71 -3 -4.82901 | gap 1, overlap 832080 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG UTI89_C0833 830368 - 832164 + | Heme-binding protein precursor (hemin-binding lipoprotein) TERM 1154 832762 - 832776 + G 70 -7.1 -4.08064 | overlap 832747 832745 832744 CGCGCTTTACCCGCG CGTCG TTTGT CGACG TTTTAAGCGAAGATT TERM 1155 833007 - 833019 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT yliC 832182 - 833102 + | putative ABC transporter permease protein UTI89_C0835 833105 - 834016 + | putative transport system permease protein TERM 1156 834155 - 834127 - f 80 -7.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACTATT TTGCAGCGGC ACAGCGTTCAGACAG TERM 1157 835710 - 835683 - g 70 -5.5 -4.431 | GAGTTACGCAGAAAA GCTGAAACTGG CGATTT CCAGTATCCGC AACCATATGTTCTCA TERM 1158 836140 - 836127 - g 71 -2.3 -4.95484 | opp_overlap 836132 CATCATGAAAGAAAA TGGCC TGAA GGCGA ACAGCCTTTGTGTTG yliE 834193 - 836541 + | hypothetical protein TERM 1159 836580 - 836591 + G 79 -4.4 -4.95806 | overlap 836589 AATTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT yliF 836549 - 837877 + | hypothetical protein TERM 1160 837926 - 837878 - T 72 -9.8 -3.1505 | gap 1, opp_overlap 837862 837886 837890, overlap 837881 ATTAGCTGGCAGTAA TCATTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAATTA AACCCGGCTACCCCA TERM 1161 837923 - 837881 - T 77 -11.5 -2.78018 | gap 1, opp_overlap 837886 837890, overlap 837878 AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC TERM 1162 837886 - 837919 + T 74 -9.5 -3.33696 | opp_overlap 837881 837878, overlap 837890 GCAGTAATCATTATT CGCAGGCCGGACAAA TGAT TTTGCCCGGCCTGAA TTAATTAAACCCGGC TERM 1163 837890 - 837915 + T 84 -13.3 -2.60244 | opp_overlap 837881 837878, overlap 837886 TAATCATTATTCGCA GGCCGGACAAA TGAT TTTGCCCGGCC TGAATTAATTAAACC yliG 839249 - 837924 - | hypothetical protein TERM 1164 839229 - 839217 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 839462 - 839845 + | biofilm formation regulatory protein BssR TERM 1165 839841 - 839885 + F 75 -5 -4.84359 | opp_overlap 839849 839853, overlap 839849 839850 839853 CCATGCTTGAGAAGG CCTGAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 1166 839877 - 839849 - f 81 -9.6 -4.12198 | opp_overlap 839849 839841 839850 839853, overlap 839853 GAGAAGGCCTGAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1167 839850 - 839877 + F 75 -9.3 -3.59063 | gap 1, opp_overlap 839849 839853, overlap 839849 839841 839853 AGAAGGCCTGAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1168 839853 - 839873 + F 93 -12.6 -3.48703 | opp_overlap 839849 839853, overlap 839850 839849 839841 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1169 839873 - 839853 - f 95 -12.6 -3.67175 | opp_overlap 839853 839850 839849 839841, overlap 839849 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1170 840421 - 840433 + G 77 -2.7 -5.16841 | CGGATGGTATTTGAC GGTAA AGG TTATC TTTTTATTGCTCTGG TERM 1171 840717 - 840702 - g 71 -2.4 -4.92239 | overlap 840706 GCAAAAAGGCAAAAA CTACGG CTGG CCGCTG GCAACCTGGGGAATC yliI 839956 - 841071 + | hypothetical protein yliJ 841700 - 841068 - | GST-like protein TERM 1172 841973 - 841988 + G 87 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT dacC 841920 - 843143 + | D-alanyl-D-alanine carboxypeptidase fraction C TERM 1173 843179 - 843155 - T 85 -12.1 -3.30159 | opp_overlap 843155 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT TERM 1174 843155 - 843179 + T 100 -13.6 -3.39862 | opp_overlap 843155 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT deoR 843948 - 843190 - | DNA-binding transcriptional repressor DeoR TERM 1175 843700 - 843711 + g 79 -3.6 -5.06414 | overlap 843702 CGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG ybjG 844602 - 844006 - | undecaprenyl pyrophosphate phosphatase TERM 1176 844384 - 844374 - G 72 -5.4 -4.56597 | overlap 844376 GGTCGTGCGGAAAAA GATG TCC CATC GTCCAGGACACAAAC cmr 844857 - 846119 + | MdfA/Cmr MFS multidrug transporter TERM 1177 846125 - 846151 + T 95 -13.1 -3.37464 | opp_overlap 846125 CGAAGGGTAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCGAATTAATGG TERM 1178 846151 - 846125 - T 100 -10.9 -5.47399 | opp_overlap 846125 CGAAGGGTAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCGAATTAATGG ybjH 846426 - 846160 - | hypothetical protein ybjI 847329 - 846511 - | hypothetical protein ybjJ 848597 - 847326 - | putative DEOR-type transcriptional regulator TERM 1179 848114 - 848101 - GH 71 -3.1 -4.85599 | gap 1, opp_overlap 848112 CCCAGGCTATAAAAA CCG-TG CAT CATCGG TAAAACCGTCTTATT ybjK 848588 - 849154 + | putative DEOR-type transcriptional regulator TERM 1180 849216 - 849180 - TR 88 -3.7 -5.4833 | TCAGGCAACAAAAAA CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG CTCCACAAAATGGGG TERM 1181 849275 - 849245 - TR 72 -3.3 -4.97158 | gap 1, opp_overlap 849272 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG ybjL 851014 - 849329 - | hypothetical protein TERM 1182 849913 - 849899 - G 83 -10 -4.09108 | opp_overlap 849898 849897 849895 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACGCG TERM 1183 850179 - 850218 + g 72 -7.8 -3.85817 | GGATCGAGTCGTGCG TGGGCGTCGGGATAGCCT ACCA ACGCTATTTCATCGCCCA TTTGTAGCACAGCAT ybjM 851284 - 851661 + | hypothetical protein TERM 1184 851687 - 851655 - T 81 -3.3 -5.40625 | opp_overlap 851663, overlap 851663 ACAGCACAGAAAAAA TCAATAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 1185 851663 - 851679 + T 74 -9.4 -3.29511 | opp_overlap 851655 851663 GAAAAAATCAATAAA GCCCTC AACGC GAGGGC TTGTCAGACGATCAG TERM 1186 851679 - 851663 - T 89 -10.1 -4.54301 | opp_overlap 851663, overlap 851655 GAAAAAATCAATAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG grxA 851948 - 851691 - | glutaredoxin 1 ybjC 852108 - 852395 + | hypothetical protein nfsA 852379 - 853101 + | nitroreductase A TERM 1187 853626 - 853679 + G 76 -11 -3.27475 | gap 1, opp_overlap 853646, overlap 853624 853627 853646 TGTCGTGCTGGCGGA GACGCG-TCAGGCGGCCGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 1188 853627 - 853678 + G 90 -14.5 -2.56271 | gap 1, opp_overlap 853646, overlap 853626 853624 853646 GTCGTGCTGGCGGAG ACGCG-TCAGGCGGCCGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 853162 - 854064 + | ribosomal protein S6 modification protein ybjN 854104 - 854628 + | putative sensory transduction regulator TERM 1189 854680 - 854633 - f 74 -10.6 -2.61264 | gap 1, opp_overlap 854636 854636, overlap 854632 TCCTCCACTGATAAC TCCTTTCGAGCACGCAGTCGCTG CCG CAGTGACTGCGTGC-CGCAAAAT TATCCGCTGTTTTTA TERM 1190 854636 - 854679 + F 100 -14 -3.39892 | gap 1, opp_overlap 854633 854632, overlap 854636 TCCACTGATAACTCC TTTCGAG-CACGCAGTCGCTG CCG CAGTGACTGCGTGCCGCAAAA TTATCCGCTGTTTTT TERM 1191 854636 - 854678 + F 100 -17.3 -2.62851 | opp_overlap 854633 854632, overlap 854636 TCCACTGATAACTCC TTT-CGAGCACGCAGTCGCTG CCG CAGTGACTGCGTGC-CGCAAA ATTATCCGCTGTTTT TERM 1192 854865 - 854876 + G 72 -4.4 -4.63218 | AGCAGTGCAGGCCGG GAGA GAGT TCTC TTTTCTTACACCGCG TERM 1193 854920 - 854902 - g 71 -3.2 -4.82901 | opp_overlap 854902 CCGCGCCGATAAAAA TATGCA CGTTTAT TGCATA TCTTTCAGTGTGACA TERM 1194 855947 - 855935 - g 72 -6.9 -4.20918 | GCTAACGCCAATAAA GCAGC CAC GCCGC TGGTGAGTGCGGAAG potF 854834 - 856090 + | putrescine ABC transporter periplasmic substrate-binding protein TERM 1195 856752 - 856733 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 856185 - 857318 + | putrescine transporter ATP-binding subunit potH 857328 - 858281 + | putrescine ABC transporter membrane protein TERM 1196 858819 - 858829 + GF 85 -3.2 -5.37345 | ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTTGTCATTACG potI 858236 - 859123 + | putrescine ABC transporter membrane protein TERM 1197 859153 - 859177 + F 95 -12.2 -4.25104 | opp_overlap 859156, overlap 859156 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG TERM 1198 859156 - 859174 + F 95 -11.7 -4.25256 | opp_overlap 859156, overlap 859153 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG TERM 1199 859174 - 859156 - f 88 -11.7 -3.48772 | opp_overlap 859153 859156 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG ybjO 859183 - 859671 + | hypothetical protein TERM 1200 860111 - 860127 + G 70 -4.3 -4.48741 | opp_overlap 860100, overlap 860112 GAAAGCCAGAGCGAT GGCGGCA TGA TGCTGCG TTTTGTACTGCGTTC rumB 859712 - 860839 + | 23S rRNA methyluridine methyltransferase TERM 1201 860844 - 860857 + T 81 -9.5 -3.98172 | opp_overlap 860844 TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTTCTGAATCTTACT TERM 1202 860857 - 860844 - T 100 -9.5 -5.5604 | opp_overlap 860844 TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTTCTGAATCTTACT artJ 861650 - 860868 - | arginine-binding periplasmic protein 2 precursor TERM 1203 861136 - 861151 + g 75 -4.7 -4.86621 | opp_overlap 861136 AAGGCATTCTGATAA CTGTC ATAGGA GACAG TTTTTACTTCCGGGT TERM 1204 861217 - 861241 + g 77 -7.2 -4.46757 | opp_overlap 861217 TTTTCCATCCCAATA CGTTTGCC TTTCAGATC GGCAAACG TTTTGTAGGTATCTT TERM 1205 861748 - 861722 - R 100 -8 -5.99154 | opp_overlap 861722 TATGAAATAAAAAAA GACGGACAGC TTAGTGG GTTGTCCGTC TTCATAATAAGAATT TERM 1206 861722 - 861748 + r 81 -11.6 -3.21595 | opp_overlap 861722 TATGAAATAAAAAAA GACGGACAGCTT AGT GGGTTGTCCGTC TTCATAATAAGAATT artM 862493 - 861825 - | arginine transporter permease subunit ArtM artQ 863209 - 862493 - | arginine transporter permease subunit ArtQ TERM 1207 863165 - 863155 - G 74 -8.2 -3.99898 | opp_overlap 863161, overlap 863156 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 863947 - 863216 - | arginine-binding periplasmic protein 1 precursor artP 864693 - 863965 - | arginine transporter ATP-binding subunit TERM 1208 864880 - 864852 - R 79 -9 -3.96148 | gap 1, opp_overlap 864851 864852 864873 864874, overlap 864873 GTCGGCGAGCATAAA TGT-CGGCATTCC TCAC GAAATGCCGTACA ATTTACGGGGTTTAT ybjP 865450 - 864911 - | putative lipoprotein TERM 1209 865191 - 865216 + g 72 -7.5 -3.92373 | TGACTATTATCGCGG CTGGCATCGCT AAGT AGGGTTGCCAG TTTGTCACTCAAATA ybjQ 865552 - 865875 + | hypothetical protein ybjR 865872 - 866702 + | N-acetylmuramoyl-L-alanine amidase ybjR ybjS 867775 - 866699 - | hypothetical protein TERM 1210 866835 - 866863 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGACGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 869316 - 867811 - | hypothetical protein TERM 1211 867933 - 867907 - GR 70 -5.9 -4.29049 | gap 1, overlap 867904 867908 TAACCAGTAAAACAA CCCTGGCATACC GTGC GG-ATGCCAGAA TGCGCGAACATCGAT TERM 1212 868328 - 868341 + gr 84 -3.8 -5.20606 | TCATATCCCCAGTCG CTGG AGTTGA CCAG TTTTTCTTCCTCTTT ybjU 870253 - 869252 - | L-threonine aldolase TERM 1213 870142 - 870118 - GR 72 -8.5 -3.59979 | opp_overlap 870106 CTTCTTTACCGGAAA GCTCTGCTGCA TAG TCCTGCAGAGC ATTAACGGTAGGGTC poxB 872008 - 870290 - | pyruvate dehydrogenase TERM 1214 872131 - 872106 - R 85 -11.9 -3.38581 | overlap 872104 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATCAGGCGATTATGC hcr 873115 - 872141 - | HCP oxidoreductase, NADH-dependent TERM 1215 872747 - 872735 - G 70 -10.5 -2.71119 | overlap 872734 ACGCATCGACATAAT CGGCG TGA CGCCG CAGCCTGCCGCCAGC ybjW 874779 - 873121 - | hydroxylamine reductase TERM 1216 874947 - 874932 - R 72 -3.2 -4.99035 | overlap 874934 TTATGCAGAGAAAAA GGCGAT GAGA ATCGGC ACTAACAGACTAAGA ybjE 875816 - 874917 - | hypothetical protein TERM 1217 876038 - 875989 - R 100 -18.5 -4.06491 | gap 1 GCAATGCCATATAAA GCCACTGGCGCAGGGAGCGGCCAG TCG CCG-CCGCCCCCTGCACCCCCGGC CTTCGGGGAACGCCT aqpZ 876838 - 876137 - | aquaporin Z UTI89_C0879 877200 - 877045 - | hypothetical protein TERM 1218 877164 - 877204 + g 81 -10.5 -3.70068 | opp_overlap 877177 877178, overlap 877165 CATTTTTCAGACATT TGCCATGCTTAAATGTGAT GTC ATCACGTATTAGCATGGCC TTTCCCGTTATACTG TERM 1219 877165 - 877203 + g 85 -14 -2.81559 | opp_overlap 877177 877178, overlap 877164 ATTTTTCAGACATTT GCCATGCTTAAATGTGAT GTC ATCACGTATTAGCATGGC CTTTCCCGTTATACT ybjD 877258 - 878916 + | hypothetical protein TERM 1220 878938 - 878987 + T 84 -6.6 -5.14965 | gap 3, overlap 878940 878941 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT ybjX 879905 - 878913 - | hypothetical protein TERM 1221 878941 - 878985 + g 73 -11.6 -2.80472 | gap 2, overlap 878940 878938 ATCGTGGCCATTTGT GGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC CGTTTTTTACTGGCG TERM 1222 879746 - 879735 - G 71 -3 -4.7373 | CGAGCGCAGCAAAAA TTTC TGGC GAAA ACTACGGCGATGCCA UTI89_C0882 879974 - 880108 + | hypothetical protein macA 880020 - 881135 + | macrolide transporter subunit MacA TERM 1223 881360 - 881398 + G 72 -4.6 -4.65263 | gap 3, overlap 881365 GTTGCCACGCTGGAC GCCG--ATGCGC-TGGCGC AACT GCGCCGCGAGCATTTCGGC TTTATTTTCCAGCGT TERM 1224 882167 - 882155 - g 84 -7.7 -4.66163 | overlap 882159 ATCGCCATCCAAAAA CAACC GTG GGTTG CCTCTGCCACGCCCG TERM 1225 882399 - 882431 + G 85 -13.5 -3.25823 | ATGTGGTTGGCGAGG TGATTCTGGTCGGCA ATA TGCCCGCCAGAGTCA TTGGTGTGGCGGAAG ybjZ 881132 - 883078 + | macrolide transporter ATP-binding /permease protein TERM 1226 883114 - 883094 - T 100 -12.6 -4.96848 | opp_overlap 883094 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT TERM 1227 883094 - 883114 + T 100 -12.6 -4.35926 | opp_overlap 883094 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT cspD 883405 - 883151 - | stationary phase/starvation inducible regulatory protein CspD UTI89_C0886 883533 - 883249 - | hypothetical protein TERM 1228 883810 - 883820 + G 77 -6.8 -4.45738 | opp_overlap 883810 TCAATGATGATTATA CTCC GAT GGAG TTTGTTATTGACGTG clpS 883698 - 884018 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1229 884026 - 884013 - f 86 -8.1 -4.85599 | TGTACGCTAGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1230 884721 - 884710 - g 70 -7.2 -4.07568 | CTGGTGTCGGTAAAA CCGC GATT GCGG AGGGGCTTGCATGGC TERM 1231 886231 - 886191 - g 90 -6.8 -5.11033 | opp_overlap 886193 GACAACCTGAAAAAA CCGCTCGCCAACGAAC TGCTGTTTG GTTCGCTGGTGGACGG CGGTCAGGTCACCGT clpA 884049 - 886325 + | ATP-dependent Clp protease ATP-binding subunit TERM 1232 886351 - 886378 + T 100 -10.6 -5.38054 | AGGTAGGTTGGTTAA GTCCGTGATCTC GTCA GGGGTTACGGAC TTTTTATTTATGGGG UTI89_C0889 886715 - 886443 - | hypothetical protein TERM 1233 887218 - 887200 - H 73 -4.6 -4.78848 | opp_overlap 887204, overlap 887204 CCTTCAAATATAAAA TAATCACA GGA TGTGTTTA TGTCTTCGAATTACC UTI89_C0890 887218 - 888201 + | hypothetical protein TERM 1234 889077 - 889044 - g 90 -9.5 -4.56775 | gap 1, opp_overlap 889044 889061 AGCTGGCGGGAAAAA GCGCGTCAGATAGCCC GCC GGGCAAGC-AACGCGC TCGGTTTAAAGACAT TERM 1235 891121 - 891134 + G 79 -2.3 -5.29782 | overlap 891120 891121 TTCGTTATTCCCCTT TGCCG GAGG CGGTG TTTTTTCTGCATATG TERM 1236 891266 - 891285 + G 90 -7.8 -4.75309 | CGTCGCTTGCTGGGG CGTGATGG ATTA CCAACACG TTTTGTTGAATTTAG UTI89_C0891 888198 - 891431 + | hypothetical protein TERM 1237 891612 - 891622 + F 74 -5.4 -4.64048 | opp_overlap 891611 891612, overlap 891611 TCTTTTAGAAGATAT CTCT AGG AGAG TTTGTTTGTGTGATC TERM 1238 893010 - 892994 - g 86 -6.5 -5.06414 | opp_overlap 892994 892996, overlap 892997 GCTGTCGAACAAAAA GAGTGGC GCA GCCAGTC TCTGTTCGCTCAACG UTI89_C0892 891761 - 893068 + | hypothetical protein UTI89_C0893 893065 - 893280 + | hypothetical protein TERM 1239 893484 - 893497 + G 72 -4.5 -4.72986 | gap 1, overlap 893483 CAGCATTGTCAGTAT GC-GCG ATC CGCAGC TTTTTCATGCGCCTG UTI89_C0894 893347 - 893988 + | hypothetical protein UTI89_C0895 893999 - 895000 + | hypothetical protein UTI89_C0896 895011 - 895565 + | hypothetical protein TERM 1240 895585 - 895606 + F 86 -7.9 -4.82901 | overlap 895584 895583 TTGCAATTTTTAACA GGCCTGGCC ATGT GGTTGGGCC TTTTTATGCGCGCCA TERM 1241 895662 - 895643 - f 100 -10 -5.71712 | opp_overlap 895641 895643 CCGCATACAAAAAAA GCCCGTAC TTTC GTACGAGC TCTTCTTTAAAGATG UTI89_C0898 896133 - 896453 + | hypothetical protein TERM 1242 896564 - 896548 - T 93 -10.1 -5.14477 | opp_overlap 896548 CATAGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTACTCATTCTTT TERM 1243 896548 - 896564 + T 79 -7.9 -4.40037 | opp_overlap 896548 CATAGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTACTCATTCTTT infA 896825 - 896607 - | translation initiation factor IF-1 aat 897814 - 897110 - | leucyl/phenylalanyl-tRNA--protein transferase cydC 899577 - 897856 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 901344 - 899578 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1244 901305 - 901320 + g 72 -6.2 -4.40561 | TGACGCTTTGCTGTT TTAACC AGCG GGTTAA TTCTTTTTGACGGGA TERM 1245 901441 - 901407 - R 83 -6.5 -5.06103 | gap 1, opp_overlap 901408 901411, overlap 901411 ACAACGGGGAAAAAA TAAAGGCGAC-CCATA GTCG CATGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1246 901408 - 901440 + r 77 -7.1 -4.33854 | gap 1, opp_overlap 901407 901411, overlap 901411 CAACGGGGAAAAAAT AAAGGCGAC-CCAT AGTCGC ATGGTGTCGCCTTC TTTACTTTTGTTACT TERM 1247 901437 - 901411 - R 93 -9.5 -5.04249 | gap 1, opp_overlap 901408 901411, overlap 901407 CGGGGAAAAAATAAA GGCGAC-CCATA GTCG CATGGTGTCGCC TTCTTTACTTTTGTT TERM 1248 901411 - 901437 + r 80 -8.8 -4.25231 | gap 1, opp_overlap 901411 901407, overlap 901408 CGGGGAAAAAATAAA GGCGAC-CCAT AGTCGC ATGGTGTCGCC TTCTTTACTTTTGTT trxB 902552 - 901467 - | thioredoxin reductase TERM 1249 902295 - 902312 + g 81 -6.9 -4.66163 | overlap 902282 TTCCACTTCCGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT lrp 902976 - 903470 + | leucine-responsive transcriptional regulator TERM 1250 903524 - 903560 + F 78 -8.8 -4.13767 | gap 1, opp_overlap 903526 903530, overlap 903527 903530 TCCTGTTAATCCATA CAG-CAACAGTACTGGG GTAA CCTGGTACTGTTGTCCG TTTTAGCATCGGGCA TERM 1251 903527 - 903556 + F 86 -13.7 -2.75577 | opp_overlap 903526 903530, overlap 903524 903530 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG TERM 1252 903530 - 903553 + F 75 -9.6 -3.52113 | opp_overlap 903530 903526, overlap 903527 903524 TAATCCATACAGCAA CAGTACTGGG GTAA CCTGGTACTG TTGTCCGTTTTAGCA TERM 1253 905352 - 905315 - g 74 -3.2 -5.00616 | opp_overlap 905321 905326, overlap 905316 905317 905319 TCTGGTGTGAAAAAA GCGACACTGGCGACGG GGGCTG CCGCAACCGTTGCCGC GCCAGTCTTCAGTCT ftsK 903605 - 907648 + | DNA translocase FtsK TERM 1254 907664 - 907693 + F 85 -12.1 -3.32698 | opp_overlap 907672, overlap 907662 TTAATGCAACGTAGG CCGGATAAGACGC GATA GCGTCGCATCCGG TATTCTATCAACTGA lolA 907804 - 908418 + | outer-membrane lipoprotein carrier protein ycaJ 908429 - 909772 + | recombination factor protein RarA serS 909863 - 911155 + | seryl-tRNA synthetase TERM 1255 911148 - 911162 + TF 70 -2.8 -4.89852 | opp_overlap 911148 ACGGACTGGAATATA TTGGCT AAT ACCCAA TTTTTCTGAATCTAA TERM 1256 911181 - 911194 + TF 77 -9.5 -3.65199 | opp_overlap 911181 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTAAGTAGAGGCTT TERM 1257 911194 - 911181 - Tf 91 -9.5 -4.74103 | opp_overlap 911181 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTAAGTAGAGGCTT TERM 1258 911277 - 911300 + GT 90 -8.1 -4.94262 | opp_overlap 911277, overlap 911293 CTTTGAATGCAAAAA GCCCACAAC TTCTAT GCTGTGGGC TTTGTTTTTGGTGTC TERM 1259 911300 - 911277 - gT 100 -10.3 -4.74103 | opp_overlap 911277 911293 CTTTGAATGCAAAAA GCCCACAAC TTCTAT GCTGTGGGC TTTGTTTTTGGTGTC TERM 1260 911293 - 911350 + GT 100 -18.7 -4.62069 | opp_overlap 911277 911344, overlap 911277 911343 911344 CCCACAACTTCTATG CTGTGGGCTTTGTTTTTGGTGTCCTCA TGAG TGAGGGAACCAAAAAGAAAACCCGCAG TTTTTACGCTGCGGG TERM 1261 911344 - 911365 + GT 70 -9.4 -2.97158 | opp_overlap 911344, overlap 911293 911343 GAACCAAAAAGAAAA CCCGCAGT TTTTAC GCTGCGGG CTTGTTGTTCACGTC TERM 1262 911365 - 911344 - gT 100 -8.7 -5.34655 | opp_overlap 911293 911344 911343 GAACCAAAAAGAAAA CCCGCAG TTTTTACG CTGCGGG CTTGTTGTTCACGTC TERM 1263 911416 - 911457 + GT 90 -12.4 -3.27774 | gap 2, opp_overlap 911425, overlap 911410 911421 TTCGACCTTTACCCT GGCAACCGATTGACGGGGGA TTGC TCCCCCGTCG--CGGTTTCC TTACTGCTTACACTG TERM 1264 911421 - 911452 + GT 81 -9.5 -3.98113 | gap 2, opp_overlap 911425, overlap 911410 911416 CCTTTACCCTGGCAA CCGATTGACGGGGGA TTGC TCCCCCGTCG--CGG TTTCCTTACTGCTTA UTI89_C0910 911598 - 911458 - | hypothetical protein UTI89_C0909 911268 - 911546 + | hypothetical protein TERM 1265 911660 - 911692 + Gr 75 -9.2 -3.59262 | gap 1, opp_overlap 911673, overlap 911622 AGGTAGATATGTTAG GGCCTCGGTTAAACA GAAA TGTTTT-CCGGGGCC TTTCCACATCTGGCC UTI89_C0911 911530 - 911793 + | hypothetical protein UTI89_C0912 912050 - 911790 - | hypothetical protein TERM 1266 911877 - 911891 + g 70 -5.6 -4.37534 | opp_overlap 911879, overlap 911879 ACCTTCTGAAGAGTG AACGCC GGA GGCGTG TTTTGATGTGAATTT TERM 1267 911879 - 911889 + g 72 -8.2 -3.78208 | opp_overlap 911879, overlap 911877 CTTCTGAAGAGTGAA CGCC GGA GGCG TGTTTTGATGTGAAT UTI89_C0913 913202 - 912093 - | putative bacteriophage late gene regulator TERM 1268 912453 - 912470 + g 100 -4.1 -5.93252 | gap 1, overlap 912453 912454 GGGTTTTGGCGGTTT G-CGGCGT TTC ACGCTGAC TTTTTTCTTTTTCCC TERM 1269 914162 - 914141 - g 73 -3.7 -4.78597 | TCAACAACAAAGAAA TTACGACCA TTAT TCGTCGCAA CGGGTTCCGCTTCTG UTI89_C0914 913360 - 914544 + | putative tail sheath protein of prophage CP-933T UTI89_C0915 914544 - 915056 + | putative tail fiber component of prophage CP-933T TERM 1270 915391 - 915401 + GF 71 -3.2 -4.73635 | ATGATTAAAAAAATG TCGT CAC GCGA TTTTATTCAGTTGTG UTI89_C0916 915112 - 915486 + | prophage CP-933T unknown protein TERM 1271 915523 - 915540 + GF 89 -8.4 -4.68593 | overlap 915518 ACATCGAAGATCTGG TGGCGG ATATTG CCGCCA TTTTTAACTGGTCGC UTI89_C0917 915414 - 915650 + | putative phage tail protein TERM 1272 915857 - 915817 - g 72 -8.2 -3.72893 | gap 1, opp_overlap 915816 GACGCTGTCAGTAAA GCG-GATGCGGGCATCGTG AAAG CACGACGCCAGCTTAACGC CCTTAATCAGTTACA TERM 1273 915919 - 915909 - g 90 -6.8 -5.16681 | overlap 915901 CGAAAAACAACAAAA GCTG ATG CAGC AGTTAAGCACCCGGC TERM 1274 916199 - 916223 + G 95 -9.1 -5.02074 | overlap 916195 CAATTGGTGCGGCAG CGGCGGGCGGC TAT GCTGCCGGGCG TTTTTTGCAGCCTGC TERM 1275 918400 - 918425 + G 88 -8.9 -4.62069 | gap 1, opp_overlap 918396 918395 918400, overlap 918400 918401 AGGGCAGAAATGGAA C-GGCGCGCCCG TGC CGGGCGTGGCAG TTTTTACGATAAAGA TERM 1276 918401 - 918423 + G 76 -12.6 -2.61831 | opp_overlap 918396 918395 918400, overlap 918400 918400 GGGCAGAAATGGAAC GGCGCGCCCG TGC CGGGCGTGGC AGTTTTTACGATAAA UTI89_C0918 915637 - 918444 + | putative phage tail protein TERM 1277 918567 - 918549 - g 72 -4.6 -4.62069 | GCGGCATGTGAAAAA TGAACG CGTTAAC CGTTCA GCAAGCTGGCAGTAT TERM 1278 918825 - 918861 + G 83 -13.2 -3.1211 | gap 1 GACTCTTGAACGCTG TGATGAGGATTTGCGGG AGCG CCTGCAA-TCCTCATCG TTCAGTGATATGCTG UTI89_C0919 918451 - 918945 + | putative tail fiber protein of prophage CP-933T TERM 1279 918986 - 918953 - T 71 -9.8 -3.08679 | opp_overlap 918954 918959, overlap 918959 TGTTCTGATTTAACA CAAAAACCGCTAAT GGTCAG ATTAGCGGTTTTCA TTTTCCTGAGTCTGC TERM 1280 918954 - 918985 + T 70 -8.9 -3.17361 | opp_overlap 918953 918959, overlap 918959 GTTCTGATTTAACAC AAAAACCGCTAAT GGTCAG ATTAGCGGTTTTC ATTTTCCTGAGTCTG TERM 1281 918980 - 918959 - T 91 -8.8 -5.10767 | opp_overlap 918954 918959, overlap 918953 GATTTAACACAAAAA CCGCTAAT GGTCAG ATTAGCGG TTTTCATTTTCCTGA TERM 1282 918959 - 918980 + T 89 -8.8 -4.70319 | opp_overlap 918959 918953, overlap 918954 GATTTAACACAAAAA CCGCTAAT GGTCAG ATTAGCGG TTTTCATTTTCCTGA pin 919573 - 918974 - | putative DNA-invertase UTI89_C0921 919678 - 920514 + | tail fiber protein gpH UTI89_C0922 920518 - 921045 + | tail fiber assembly UTI89_C0923 921607 - 921074 - | tail fiber assembly protein TERM 1283 921208 - 921219 + g 72 -5.8 -4.42386 | overlap 921199 GCCGTAGCTGTGAGT CCCA TAGC TGGG TTTTATCCCTGACAA TERM 1284 921444 - 921456 + g 74 -7.7 -4.13728 | ATAATAACGCCGTTA TGGTC ATA GACCA TTTTCAAAGTGTCTG UTI89_C0924 923595 - 921610 - | putative phage protein gpH TERM 1285 922175 - 922186 + g 70 -5.8 -4.1822 | overlap 922161 CCAGCAATTTTTCGT GCTG TTTT CAGC TTTGTTGCAGTAGCG TERM 1286 923517 - 923538 + g 90 -4.3 -5.40474 | overlap 923518 923520 GGACAGGCTTACCAT CTGGCGCGG CTGC CTGCGCTAA TTTTTTTGCACCCGT TERM 1287 923550 - 923567 + g 70 -4.9 -4.44277 | gap 1 CTAATTTTTTTGCAC CCGT-ATC GGT GATAACGG TTTTAAATTTTCGTG UTI89_C0925 924128 - 923598 - | putative phage protein gpI UTI89_C0926 925017 - 924121 - | phage baseplate assembly protein UTI89_C0927 925371 - 925021 - | phage baseplate assembly protein UTI89_C0928 925949 - 925368 - | putative phage protein gp15 UTI89_C0929 926590 - 925946 - | tail completion phage protein UTI89_C0930 927041 - 926574 - | tail completion phage protein UTI89_C0931 927730 - 927179 - | hypothetical protein UTI89_C0932 927975 - 927583 - | putative endolysin UTI89_C0933 928295 - 927972 - | phage holin TERM 1288 928105 - 928068 - G 81 -9.9 -3.86346 | gap 1, overlap 928098 TGATGCGCCGATAAA CGTCACGGCATCTTCAGG AAA CCCGAAGAAGC-GCAACG ACCCGGCCACGGTCA UTI89_C0934 928498 - 928298 - | putative phage tail protein TERM 1289 928397 - 928415 + g 72 -6.6 -4.18018 | CTGCTGACAGAGTCC GGGGTTGG CAT CCAGCACC TTTTCGGTGACGCCC UTI89_C0935 928992 - 928498 - | putative capsid completion protein TERM 1290 928590 - 928612 + g 74 -10.4 -3.46511 | overlap 928604 ATGTCTGTATATCCA GTGCGTCCGC CCG GCGGTCGCCC TTGTCCGTTGTGTCC UTI89_C0936 929894 - 929094 - | hypothetical protein TERM 1291 929215 - 929225 + g 71 -2.4 -5.00616 | TCTTCTGGTGCGGCT GCGG AAT CGGC TTTTTTCAGGGCGCG TERM 1292 929814 - 929828 + g 80 -11.4 -3.33696 | ATGCGCGGTACGCGC GGCGTG GTC CACGCC TTCATTCGCCCGGCC TERM 1293 929906 - 929935 + r 71 -9.3 -3.39142 | gap 1, overlap 929907 TCATTTTTTCTCTCC GTTACAGGCGGGCA TGA TGCCCGCC-GTGAG TTGATTAGCTGTCGG TERM 1294 929907 - 929934 + r 81 -12.8 -2.63164 | gap 1, overlap 929906 CATTTTTTCTCTCCG TTACAGGCGGGCA TGA TGCCCGCC-GTGA GTTGATTAGCTGTCG UTI89_C0937 930992 - 929940 - | major capsid protein UTI89_C0938 931852 - 931016 - | putative capsid scaffolding protein TERM 1295 931082 - 931093 + g 83 -5.8 -4.88407 | overlap 931068 CTGCGGATCGCCGTC CTGC GTGC GCAG TTTTTCCTTCAGTGC TERM 1296 931805 - 931835 + g 100 -6.9 -5.63103 | gap 1 AACAGTTGATCCGGA GACAGCCACGCGAA ACTT TTTGCG-GGATGTC TTTTTTTCATTAGCC UTI89_C0939 932007 - 933758 + | putative phage protein gpP UTI89_C0940 933758 - 934804 + | hypothetical protein TERM 1297 935135 - 935151 + G 93 -6.5 -5.24129 | TTCCCCCGTCACCTG CGCGC AGAAAAA GCGCG TTTTTTGTGCACGCA TERM 1298 935247 - 935228 - g 82 -2.1 -5.40474 | opp_overlap 935228 935230, overlap 935230 AGTCGTTCAAAAAAA TTGTGCA AATTTG TGCACTA TTGTGCATTAAAATA UTI89_C0941 934907 - 935263 + | hypothetical protein TERM 1299 935281 - 935265 - T 91 -9.4 -4.72007 | opp_overlap 935265 GTGCATTAAAATAAA CGCCCT GGAAG AGGGCG TTTTGGCTCATTTCT TERM 1300 935265 - 935281 + T 84 -9.4 -4.26681 | opp_overlap 935265 GTGCATTAAAATAAA CGCCCT GGAAG AGGGCG TTTTGGCTCATTTCT UTI89_C0942 935555 - 935295 - | hypothetical protein TERM 1301 935329 - 935345 + g 70 -5.8 -4.25283 | TGGGCTAGATGCAAG GGTTGG ACATA CCAGCC TTTTGATAACCAACT UTI89_C0943 935829 - 935566 - | prophage CP-933R unknown protein UTI89_C0944 936328 - 935831 - | hypothetical protein TERM 1302 935929 - 935955 + g 79 -3.6 -5.06414 | overlap 935952 935954 GATCGCGTTTACTCC GCAGGGCG ACGCTTGATTC CGCCCAGC TTTTTCTTGGAGGAA TERM 1303 936242 - 936253 + g 75 -7.2 -4.39998 | overlap 936242 AATGCTGAATTTATG CCCC ACCG GGGG TTTATTGTGTCGGTG UTI89_C0945 936639 - 936325 - | hypothetical protein UTI89_C0946 936968 - 936636 - | ATP-dependent specificity component of ClpP serine protease, chaperone TERM 1304 936756 - 936784 + g 88 -11.9 -3.74693 | overlap 936757 936759 TGTGACTTCGTACTG GGATTTATTGCAG AAG CTGCAATAAATCG TTTCCTCGCCTGAAG TERM 1305 936757 - 936783 + g 95 -15.4 -2.84602 | overlap 936756 936759 GTGACTTCGTACTGG GATTTATTGCAG AAG CTGCAATAAATC GTTTCCTCGCCTGAA TERM 1306 936759 - 936781 + g 78 -12.2 -2.97171 | overlap 936757 936756 GACTTCGTACTGGGA TTTATTGCAG AAG CTGCAATAAA TCGTTTCCTCGCCTG TERM 1307 937028 - 937001 - R 75 -9.8 -3.53012 | opp_overlap 937003, overlap 937002 937005 TGTTCCCGGGTTAAA GTCATCAGGGCG GATG CGCCCTGATGTT GTGTTATTCGGGAAA TERM 1308 937027 - 937002 - R 85 -13.3 -2.71712 | opp_overlap 937003, overlap 937001 937005 GTTCCCGGGTTAAAG TCATCAGGGCG GATG CGCCCTGATGT TGTGTTATTCGGGAA TERM 1309 937003 - 937026 + r 100 -16.8 -3.83318 | opp_overlap 937002 937001 937005 TTCCCGGGTTAAAGT CATCAGGGCG GATG CGCCCTGATG TTGTGTTATTCGGGA TERM 1310 937024 - 937005 - R 86 -13.6 -2.64155 | opp_overlap 937003, overlap 937002 937001 CCCGGGTTAAAGTCA TCAGGGCG GATG CGCCCTGA TGTTGTGTTATTCGG UTI89_C0947 937343 - 937032 - | prophage CP-933T putative stability/partitioning protein UTI89_C0948 938307 - 937348 - | prophage CP-933T putative stability/partitioning protein TERM 1311 937520 - 937505 - G 70 -3.9 -4.66833 | opp_overlap 937510 937513, overlap 937506 CCGTAACCCGAAAAA CCCGC CAGCGC GCGGA TCACGCGTTGTTTCA TERM 1312 937510 - 937530 + g 72 -8.9 -3.84931 | opp_overlap 937506 937505, overlap 937513 ACCCGAAAAACCCGC CAGCGCGCG GAT CACGCGTTG TTTCAGTGTTTCTTC TERM 1313 937513 - 937527 + g 70 -7 -4.02707 | opp_overlap 937506 937505, overlap 937510 CGAAAAACCCGCCAG CGCGCG GAT CACGCG TTGTTTCAGTGTTTC TERM 1314 937761 - 937738 - G 70 -6.6 -4.13767 | opp_overlap 937741, overlap 937741 GTGTGGATCGCAAAA CACCTGGCTG ATAC CTGCCAGTTG TCCCTGAACCTTTGC TERM 1315 938343 - 938360 + r 91 -9.9 -4.80396 | TTAATTAATCGTTTA CGGGATT CTGA AATCCCG TTTTTGCCTGTTTTA TERM 1316 938378 - 938400 + r 79 -4 -5.243 | opp_overlap 938391 TTTGCCTGTTTTATG CGCGCTTC ATATATC GCGGCGCG TTTTTTGCTCATTTA UTI89_C0949 941206 - 938384 - | prophage CP-933T putative replication protein TERM 1317 938416 - 938433 + g 85 -9.9 -4.28389 | TTTTTTGCTCATTTA CGGGATT TGTG AATCCCG TTTCTGTCTGTTTTT TERM 1318 939963 - 939990 + g 75 -11.4 -3.0263 | AGGCCGTCGCGGTTC AGTTTTTTGCGG ACCG CCGCAAAAAACG TGTTAACCAGGTAAT UTI89_C0950 941578 - 941213 - | prophage CP-933T unknown protein UTI89_C0951 941881 - 941651 - | prophage CP-933T unknown protein TERM 1319 941845 - 941864 + Gg 78 -10.6 -3.43919 | overlap 941844 941848 TCTGGATGTGACGAC GCTCCGCG ATAG CGCGGTGC TGTTTGCGGTTTGCC TERM 1320 941949 - 941914 - gR 73 -10.4 -3.04322 | GGTAAGTTTTGAATA CTCACCATCCAGAGGT TCCA AGCTCGGGGTGGTGAG ACGTACAGGGTTGGA TERM 1321 942011 - 941986 - gR 81 -4.5 -5.09762 | overlap 941987 GGTCAACAAAGAAAA CCCGGCCCGAC CGAA GTCGGCCCCGT ACGCCCCACCATAAT UTI89_C0952 941750 - 942025 + | hypothetical protein TERM 1322 942082 - 942071 - TR 100 -7.2 -5.64274 | opp_overlap 942071 942077 GTACGCACAAAAAAA CCGC TGGC GCGG TTGTGCGCTTTGTTG TERM 1323 942157 - 942178 + Tr 81 -2.2 -5.60993 | GGAAATGTAACCTGA CTGATTGC GGCATG GCAAGCGG TTTTTTTGTGAGAAC TERM 1324 942220 - 942246 + Tr 100 -14.4 -4.00348 | overlap 942221 AAATCCTGATACTGC TCCGGCCAGCGA TTT TCACTGGCCGGG TTTAATTACTTCACC TERM 1325 942221 - 942245 + Tr 93 -15.7 -2.99727 | overlap 942220 AATCCTGATACTGCT CCGGCCAGCGA TTT TCACTGGCCGG GTTTAATTACTTCAC UTI89_C0953 943076 - 942252 - | putative serine protease UTI89_C0954 943285 - 943073 - | hypothetical protein TERM 1326 943132 - 943118 - G 75 -5.6 -4.67353 | overlap 943126 GTAGTTACTGAAAAA GCGAAC AAC GCCCGC CGGGTACAGCAAGGC UTI89_C0956 943596 - 943297 - | prophage CP-933T unknown protein TERM 1327 943326 - 943367 + g 77 -8.7 -4.05446 | gap 1, overlap 943337 AAAAATCAAAAACCT TGTC-GATGCGTTGCAGCAG CTC CTGCTGCATTGCTTCCGGCG TTTCTGGTTCACCAG TERM 1328 943337 - 943355 + g 89 -13.2 -3.35088 | overlap 943326 ACCTTGTCGATGCGT TGCAGCAG CTC CTGCTGCA TTGCTTCCGGCGTTT UTI89_C0957 943859 - 943593 - | hypothetical protein TERM 1329 943683 - 943693 + g 70 -6.8 -4.07568 | opp_overlap 943682 TACGTGGTAAGAAGC CTGG CCT CCAG TTTTGCGAGCGCGAC UTI89_C0958 944059 - 943856 - | hypothetical protein UTI89_C0959 944493 - 944083 - | prophage CP-933T unknown protein TERM 1330 944283 - 944298 + g 76 -9 -3.7511 | opp_overlap 944282 944283 CGGTGTTAGACAAAT CCAGTC CGGT GACTGG TTGTGTTCTGAGAAC TERM 1331 944518 - 944552 + r 77 -4.3 -5.03961 | gap 1, opp_overlap 944526, overlap 944506 944519 944526 944528 TCCGTTATTTGCGTG TGCGAATACC-TCCGT TAAT ACGGATGGTTTTCACG TTTTCTTATTTAATT UTI89_C0960 944939 - 944697 - | hypothetical protein TERM 1332 944875 - 944906 + g 70 -5.9 -4.2461 | GCATGAGCGCCTGAT GCACTTAAGCG AAAATAAAAA CGCTCAAGTGC TTTGTTAATGAGAGT UTI89_C0961 945238 - 944951 - | hypothetical protein UTI89_C0962 945599 - 945249 - | hypothetical protein TERM 1333 945671 - 945702 + r 72 -10.2 -2.93456 | overlap 945670 GTATTTTTTGTGTGT CTAGGACTTGGACT GGCC GGTTCAGGTCCTGG CTTATGTTTAATTAA TERM 1334 945934 - 945956 + r 71 -9.1 -3.36327 | overlap 945936 945950 ATTTTTAATTTGATT TATGCCGGG CTGCT CCCGGCATC TTCTAGCTGCCATAA TERM 1335 945936 - 945954 + r 83 -11.7 -3.25102 | overlap 945934 945950 TTTTAATTTGATTTA TGCCGGG CTGCT CCCGGCA TCTTCTAGCTGCCAT UTI89_C0963 946355 - 945933 - | hypothetical protein UTI89_C0964 946881 - 946360 - | hypothetical protein UTI89_C0965 946985 - 947326 + | bacteriophage WPhi putative phage protein C TERM 1336 948060 - 948049 - g 73 -3.6 -4.87626 | CTTTAACACCAAAAA CGGA AAAT CCCG TTCGGTTCCTGTGGC TERM 1337 948114 - 948102 - g 82 -9.1 -4.25104 | opp_overlap 948101 948102 TGCCTCTGATTAAAA CCCGT CGA ACGGG GTTATTGTATCAGGT UTI89_C0966 947396 - 948388 + | putative phage integrase TERM 1338 948488 - 948475 - f 77 -9.5 -3.69434 | opp_overlap 948475 GCAATGAACGTTAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT TERM 1339 948475 - 948488 + F 100 -9.5 -5.72616 | opp_overlap 948475 GCAATGAACGTTAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT dmsA 948688 - 951132 + | anaerobic dimethyl sulfoxide reductase chain A precursor dmsB 951143 - 951760 + | anaerobic dimethyl sulfoxide reductase subunit B dmsC 951762 - 952625 + | anaerobic dimethyl sulfoxide reductase subunit C TERM 1340 952632 - 952658 + T 79 -5.1 -5.04733 | gap 1, opp_overlap 952636, overlap 952633 952636 GCAAGTTAATCAGTA AC-AACCGGGGT TTCG GCCCCGGTTCGC TTTTATTTCTGCTTC TERM 1341 952633 - 952657 + T 72 -8.6 -3.61213 | gap 1, opp_overlap 952636, overlap 952632 952636 CAAGTTAATCAGTAA C-AACCGGGGT TTCG GCCCCGGTTCG CTTTTATTTCTGCTT TERM 1342 952653 - 952636 - T 79 -9.8 -3.77722 | opp_overlap 952633 952632 952636 GTTAATCAGTAACAA CCGGGG TTTCGG CCCCGG TTCGCTTTTATTTCT TERM 1343 952636 - 952653 + T 77 -10.5 -3.49818 | opp_overlap 952636, overlap 952633 952632 GTTAATCAGTAACAA CCGGGGT TTCG GCCCCGG TTCGCTTTTATTTCT ycaC 953386 - 952661 - | protein YcaC UTI89_C0971 953570 - 953442 - | hypothetical protein TERM 1344 953535 - 953545 + g 70 -4 -4.59773 | GCGCGTATTTTCACC CATT GAC AATG TTTTTGGCGGTGGCA ycaD 953601 - 954749 + | MFS family transporter TERM 1345 954791 - 954760 - T 91 -13.2 -3.26596 | opp_overlap 954760, overlap 954755 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTCTGTGCACAAA TERM 1346 954760 - 954791 + T 100 -13.2 -4.52589 | opp_overlap 954760 954755 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTCTGTGCACAAA TERM 1347 954833 - 954810 - T 100 -15.4 -5.24129 | opp_overlap 954810 TCTGTGCACAAAAAA GCGGCAACTT AATA AAGTTGCCGC TTTACGGGGAAATTA TERM 1348 954810 - 954833 + T 100 -15.4 -3.53761 | opp_overlap 954810 TCTGTGCACAAAAAA GCGGCAACTT AATA AAGTTGCCGC TTTACGGGGAAATTA pflA 955586 - 954846 - | pyruvate formate lyase-activating enzyme 1 TERM 1349 954910 - 954932 + g 72 -6.3 -4.34263 | overlap 954911 TCCATGGTCTCTTTC TTCGGTGGT TTAAC ACCATCGAG TTTGTATTCTTCACC TERM 1350 955281 - 955264 - G 71 -2.7 -4.75219 | gap 1 TAACGACGAACAAAA CCGT-TGG TGT CCAGACAG GTATGAATGCCTTCT TERM 1351 955409 - 955392 - G 72 -7.7 -3.87869 | opp_overlap 955392 GGAAGCGTTCATAAA GTGGCGA TAGG TCACCAC TTCCTTCATCAAATC TERM 1352 955703 - 955747 + r 83 -7.2 -4.80882 | gap 1, opp_overlap 955716, overlap 955704 955716 TGACAAAAAAGGCTC TCGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACGC TTTTTACTGTACGAT TERM 1353 955704 - 955746 + r 81 -10.7 -3.47806 | gap 1, opp_overlap 955716, overlap 955703 955716 GACAAAAAAGGCTCT CGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACG CTTTTTACTGTACGA TERM 1354 955716 - 955735 + r 85 -9.2 -4.33851 | opp_overlap 955716, overlap 955704 955703 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT TERM 1355 955735 - 955716 - R 100 -11.4 -5.00616 | opp_overlap 955716 955704 955703 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT pflB 958060 - 955778 - | formate acetyltransferase 1 focA 959311 - 958115 - | formate transporter TERM 1356 959326 - 959304 - G 75 -11.3 -2.86654 | opp_overlap 959304, overlap 959303 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC TERM 1357 959345 - 959375 + r 73 -2.5 -5.07652 | opp_overlap 959345 959352, overlap 959350 959352 TATAACTCAGACGAA TCATTAAGCCTAC ATTGC GTAGGCTATTTGA TTTTATTTTGCCCAG TERM 1358 959350 - 959370 + r 70 -5.4 -4.41486 | opp_overlap 959345 959352, overlap 959345 959352 CTCAGACGAATCATT AAGCCTAC ATTGC GTAGGCTA TTTGATTTTATTTTG TERM 1359 959352 - 959368 + r 71 -8 -3.76546 | opp_overlap 959345 959352, overlap 959350 959345 CAGACGAATCATTAA GCCTAC ATTGC GTAGGC TATTTGATTTTATTT ycaO 961171 - 959378 - | hypothetical protein TERM 1360 959504 - 959492 - G 70 -4.7 -4.4715 | opp_overlap 959493, overlap 959493 TTGCAAGCCATAAAA CGCCG CTT CGCCG CTCATTGCCGCACTG TERM 1361 959724 - 959734 + g 75 -6.8 -4.41047 | overlap 959719 TCGCCACCAGCCAGC GCCA GCA TGGC TTTTAATTCACCGAT ycaP 961268 - 961960 + | hypothetical protein TERM 1362 962776 - 962755 - g 71 -3 -4.82901 | gap 1, opp_overlap 962772, overlap 962757 TGGCGCGCAGAAAAA TATC-GGCC CGGCT GGCCTGACA ATCGTCATCGTTCGT serC 962159 - 963247 + | phosphoserine aminotransferase TERM 1363 963288 - 963266 - f 71 -9.1 -3.32294 | opp_overlap 963267, overlap 963267 CGAAATTTTGCATAA TCCCCACAG CCAGC CTGTGGGGT TTTTATTTCTGTTGT TERM 1364 963267 - 963287 + F 100 -12.6 -5.4659 | opp_overlap 963266 963267 GAAATTTTGCATAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG TERM 1365 963287 - 963267 - f 81 -12.6 -2.59055 | opp_overlap 963267, overlap 963266 GAAATTTTGCATAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG aroA 963318 - 964601 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1366 964646 - 964664 + F 100 -12.4 -5.75945 | opp_overlap 964644 964646 CTTTCTTTTCAAAGA CGTCGGCA CAT TGCCGGCG TTTTTTTTCGGACCT TERM 1367 964664 - 964646 - f 76 -10.2 -3.34398 | opp_overlap 964646, overlap 964644 CTTTCTTTTCAAAGA CGTCGGCA CAT TGCCGGCG TTTTTTTTCGGACCT ycaL 964762 - 965535 + | putative metalloprotease YcaL TERM 1368 965651 - 965671 + F 75 -8.9 -3.66784 | opp_overlap 965664, overlap 965664 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC TERM 1369 966027 - 966064 + G 81 -10.5 -3.57561 | opp_overlap 965993, overlap 966004 AAGTCGCGGCATTCC CACGCGTTCGTGAAGCA TTAT TGCGTCGCCAACGCGCG TTTCGCGAATTACCA TERM 1370 966260 - 966248 - g 70 -6.9 -4.04806 | GCCGAGATCAAAGAA CGCGA CGA CCGCG ATCGTAACCGAGCGG TERM 1371 966368 - 966353 - g 70 -4 -4.68424 | gap 1, overlap 966362 966364 CAAGTGATTGAAAAA GCGC-TA CAA TACGCGC GCCAGAAATTGGCTC cmk 965708 - 966391 + | cytidylate kinase TERM 1372 966676 - 966666 - g 88 -8.2 -4.63527 | overlap 966667 966668 TGAGCAGTTCAAAAA CGCC CAG GGCG AGCTGGAAATCCAGG rpsA 966502 - 968175 + | 30S ribosomal protein S1 TERM 1373 968186 - 968207 + F 84 -9.5 -4.29929 | overlap 968180 AGTAATTCTCTGACT CTTCGGGAT TTTT ATTCCGAAG TTTGTTGAGTTTACT TERM 1374 968284 - 968254 - f 90 -12.7 -3.33696 | gap 1, opp_overlap 968261, overlap 968257 968261 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAGCAACAGCA TERM 1375 968282 - 968257 - f 93 -15.5 -2.84098 | opp_overlap 968261, overlap 968254 968261 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAGCAACAG TERM 1376 968261 - 968278 + F 95 -14.1 -3.18264 | opp_overlap 968257 968254 968261 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA TERM 1377 968278 - 968261 - f 100 -14.1 -3.30554 | opp_overlap 968261, overlap 968257 968254 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA ihfB 968335 - 968619 + | integration host factor subunit beta TERM 1378 968641 - 968671 + F 81 -9.8 -4.11404 | opp_overlap 968649, overlap 968642 968649 ACTCAAACTTGAACG CGAGAAAAGCACCT GTC GGGTGCTTTTTTCA TTTCTCTAATCTGGA TERM 1379 968642 - 968670 + F 86 -13.3 -3.0636 | opp_overlap 968649, overlap 968641 968649 CTCAAACTTGAACGC GAGAAAAGCACCT GTC GGGTGCTTTTTTC ATTTCTCTAATCTGG TERM 1380 968649 - 968663 + F 95 -7.8 -5.4387 | opp_overlap 968649, overlap 968642 968641 TTGAACGCGAGAAAA GCACCT GTC GGGTGC TTTTTTCATTTCTCT TERM 1381 968663 - 968649 - f 77 -7.1 -4.42788 | opp_overlap 968649 968642 968641 TTGAACGCGAGAAAA GCACC TGTCG GGTGC TTTTTTCATTTCTCT TERM 1382 969479 - 969466 - g 79 -3.9 -5.13137 | CAAAGAAATCAAAAA TATCA TGCG TGATA CTGGAACGGCGCATT ycaI 968825 - 971089 + | hypothetical protein TERM 1383 971968 - 971981 + G 77 -6.7 -4.44211 | GGATAGCCTGACTGC CGGTA CGAT TACCG TTGTTTTCTCTTCAA msbA 971126 - 972874 + | lipid transporter ATP-binding/permease protein TERM 1384 973006 - 972982 - g 75 -5.5 -4.61873 | overlap 972987 TGCTATAAACTAAAA CTGAAGCGCGC CTG GCGTGCCCCCG TACCGGTTGTCGTGG TERM 1385 973277 - 973267 - g 70 -6.8 -4.09685 | TCTGACGCGGTAAAA GCCA TTC TGGC GCAACACCCTGATGT lpxK 972871 - 973857 + | tetraacyldisaccharide 4'-kinase TERM 1386 974792 - 974803 + G 74 -2.2 -5.10154 | gap 1, opp_overlap 974792 TCTGGGATCGCAAAC GC-GC GGA GCAGC TTTTTGATTTTAGCT ycaQ 973894 - 975126 + | hypothetical protein ycaR 975178 - 975360 + | hypothetical protein kdsB 975357 - 976103 + | 3-deoxy-manno-octulosonate cytidylyltransferase ycbJ 976257 - 977150 + | hypothetical protein ycbC 977906 - 977127 - | hypothetical protein UTI89_C0992 977973 - 977809 - | hypothetical protein smtA 978030 - 978827 + | putative metallothionein SmtA TERM 1387 979964 - 979935 - gf 70 -5.7 -4.36914 | gap 1, opp_overlap 979962 TTGCCGTGTACAAAA CCAGA-CAAGTGCC GCT GGATCTTGGTCTGG TGGTACGCGAATATC TERM 1388 979992 - 980021 + GF 79 -9.3 -3.99374 | gap 1, opp_overlap 979990, overlap 979962 979993 ATCTGTCACAGTATC CGCGTGC-ACGTCA CTT TGACGTTGCGCGCA TTGTTATTGATCAGG TERM 1389 979993 - 980020 + GF 83 -12.8 -2.99142 | gap 1, opp_overlap 979990, overlap 979962 979992 TCTGTCACAGTATCC GCGTGC-ACGTCA CTT TGACGTTGCGCGC ATTGTTATTGATCAG mukF 978824 - 980146 + | condesin subunit F TERM 1390 980198 - 980213 + GF 74 -10.4 -3.17194 | GAATCCGTTATTTCC GGCGCT GGAT AGCGCC TTACGTTCAGGCCGT mukE 980100 - 980831 + | condesin subunit E TERM 1391 982066 - 982020 - g 70 -6.5 -4.15565 | gap 1, opp_overlap 982012, overlap 982024 TGGACGAGCTGAAAA GCCAGCTTGCT-GACTACCAGC AGGC GCTGGACGTCCAGCAAACGCGC GCGATCCAGTATAAC TERM 1392 982218 - 982203 - g 81 -4.7 -5.10497 | AAGCGACCGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC mukB 980831 - 985291 + | cell division protein MukB TERM 1393 985319 - 985294 - f 74 -7.5 -4.1899 | opp_overlap 985298, overlap 985298 TCAGGCGAGTTAAAA TTAAGGCGGCA GCAA TGCCGCCTTTT CTTTTTCCGAAAACT TERM 1394 985315 - 985298 - f 95 -12.7 -3.69605 | opp_overlap 985298, overlap 985294 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1395 985298 - 985315 + F 100 -12.7 -5.26119 | opp_overlap 985294 985298 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1396 986471 - 986459 - g 82 -7.7 -4.57482 | TGATGGACAAACAAA CTACG TCT CGTAG TAAACCTGCGCCTGC ycbB 985552 - 987399 + | hypothetical protein ycbK 987571 - 988128 + | hypothetical protein ycbL 988155 - 988802 + | hypothetical protein TERM 1397 988810 - 988841 + T 85 -8 -4.62471 | opp_overlap 988817, overlap 988817 TCTGGTAAAGGTGCA TAAAAAAGCCCGCT TTCA AGCGGGCTTCATTG TTTTTAACGCTTACA TERM 1398 988817 - 988834 + T 100 -12.7 -3.74868 | opp_overlap 988817, overlap 988810 AAGGTGCATAAAAAA GCCCGCT TTCA AGCGGGC TTCATTGTTTTTAAC TERM 1399 988834 - 988817 - T 100 -12.7 -5.25803 | opp_overlap 988817 988810 AAGGTGCATAAAAAA GCCCGCT TTCA AGCGGGC TTCATTGTTTTTAAC aspC 990042 - 988852 - | aromatic amino acid aminotransferase TERM 1400 989529 - 989551 + g 77 -12 -3.18912 | ACAGCACTACGTCGC CAGCCTGGGC TTC GTTCAGGCTG TTAATCAGTGCATCG TERM 1401 990195 - 990180 - R 100 -9 -5.97575 | opp_overlap 990180 AAGGCATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA TERM 1402 990180 - 990195 + r 93 -9 -5.07107 | opp_overlap 990180 AAGGCATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA ompF 991315 - 990227 - | outer membrane protein F TERM 1403 990747 - 990767 + g 70 -4.7 -4.57569 | gap 1, overlap 990749 CCGTCGCCGTTAGAG CG-GCGTG CAGTGT CACGCTCG TTTTTACCCAGGTAC TERM 1404 991766 - 991740 - R 83 -3 -5.4833 | opp_overlap 991741, overlap 991741 991744 TCAGCTAAGAAAAAA CTAATCCGCAAT AAG AATGCAGATTAT TTTTTGTGCGTAAAT TERM 1405 991741 - 991765 + r 80 -4.3 -5.28176 | opp_overlap 991740 991741 991744 CAGCTAAGAAAAAAC TAATCCGCAAT AAG AATGCAGATTA TTTTTTGTGCGTAAA TERM 1406 991902 - 991883 - R 100 -13.6 -5.75599 | opp_overlap 991885 GAAAGGATAAAAAAA GAGCCAGC GGGC GCTGGCTC TTGAAGACGCTAAAT TERM 1407 991885 - 991900 + r 73 -10.4 -3.02144 | opp_overlap 991883 AAGGATAAAAAAAGA GCCAGC GGGC GCTGGC TCTTGAAGACGCTAA asnC 993317 - 991917 - | asparaginyl-tRNA synthetase TERM 1408 993477 - 993460 - R 100 -9.1 -5.58209 | opp_overlap 993457 TTAAAGGTAAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG pncB 994736 - 993486 - | nicotinate phosphoribosyltransferase TERM 1409 996995 - 996985 - g 72 -6.8 -4.19472 | GAAGATATTGCAAAA CGCA CTC TGCG TAATGCCTGCCTGCG TERM 1410 997496 - 997484 - g 70 -4.7 -4.47328 | overlap 997485 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAACAGTTGAAAGG pepN 994954 - 997566 + | aminopeptidase N TERM 1411 997702 - 997646 - T 100 -17.4 -3.30124 | gap 1, opp_overlap 997646 997646 997647, overlap 997647 TTGTAGGCTGGATAA GGCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCG TCTTATCAGGCCTAC TERM 1412 997646 - 997704 + T 83 -11.2 -3.30124 | gap 3, opp_overlap 997646 997647, overlap 997646 997647 TTGTAGGCTGGATAA GGCGT-TCACGC--CGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCGTC TTATCAGGCCTACAA TERM 1413 997646 - 997702 + T 100 -15.2 -3.21924 | gap 1, opp_overlap 997646 997647, overlap 997646 997647 TTGTAGGCTGGATAA GGCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCG TCTTATCAGGCCTAC TERM 1414 997647 - 997701 + T 100 -18.7 -2.5294 | gap 1, opp_overlap 997647 997646, overlap 997646 997646 TGTAGGCTGGATAAG GCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGC GTCTTATCAGGCCTA TERM 1415 997701 - 997647 - T 100 -20.9 -2.57931 | gap 1, opp_overlap 997646 997646 997647, overlap 997646 TGTAGGCTGGATAAG GCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGC GTCTTATCAGGCCTA ssuB 998528 - 997761 - | aliphatic sulfonates transport ATP-binding subunit ssuC 999319 - 998525 - | alkanesulfonate transporter permease subunit ycbN 1000473 - 999328 - | alkanesulfonate monooxygenase ycbO 1001429 - 1000470 - | alkanesulfonate transporter substrate-binding subunit TERM 1416 1000514 - 1000526 + g 74 -3.3 -5.00616 | GCTGCCAGATGCGCT GGCGA ATA TCGAC TTTTTTCGGCACCAG ycbP 1001997 - 1001422 - | NAD(P)H-dependent FMN reductase TERM 1417 1002845 - 1002834 - g 74 -3 -4.91852 | GCGATTAAAAATAAA CAAA ATGA TTTG CAAGTGATGCACCAT TERM 1418 1003076 - 1003057 - g 70 -4.2 -4.65895 | overlap 1003061 CGCTTCAGTTAAAAA GCACCGAA ATTA TTCGCCGC TTGTCACAGGAATTA pyrD 1002207 - 1003244 + | dihydroorotate dehydrogenase 2 TERM 1419 1003266 - 1003309 + F 78 -10.6 -3.22448 | opp_overlap 1003276 1003277 1003279, overlap 1003273 1003277 CTTCAAATTCCTCTT TATAAGATAATCAGGGCT TTATTTTC AGCCCTGGTTGTTTTATA TTCATCGCTGTTGCT TERM 1420 1003273 - 1003302 + F 78 -6.5 -4.70583 | opp_overlap 1003276 1003277 1003279, overlap 1003266 1003277 TTCCTCTTTATAAGA TAATCAGGGCT TTATTTTC AGCCCTGGTTG TTTTATATTCATCGC ycbW 1003382 - 1003960 + | hypothetical protein ycbX 1005066 - 1003957 - | hypothetical protein TERM 1421 1004139 - 1004155 + g 74 -8.7 -3.90922 | GATTTTCTAATTGCT CCAGCAG CAC CTGTTGG TTATTTCCACGAAAT TERM 1422 1004547 - 1004564 + g 75 -5.5 -4.62069 | opp_overlap 1004538 1004539 CGGAAACCACCAGAT TGGGGCG GAAT TGCTCCA TTTTTACACTGGCCG ycbY 1005164 - 1007272 + | 23S rRNA m(2)G2445 methyltransferase uup 1007284 - 1009191 + | ABC transporter ATPase component TERM 1423 1009265 - 1009237 - f 82 -8.9 -4.21936 | overlap 1009238 CTGACAACGGTAAAA TTGCCTGATGAAC TGG GTTTATCAGGCAT GAAAACCAACACTTT TERM 1424 1009264 - 1009238 - f 83 -12.4 -3.1268 | overlap 1009237 TGACAACGGTAAAAT TGCCTGATGAAC TGG GTTTATCAGGCA TGAAAACCAACACTT TERM 1425 1009719 - 1009735 + GF 72 -4.3 -4.62069 | opp_overlap 1009719 GGTCCGTTTAAAAGA GCAACTG GCA CGGGTGC TTTTTCAACTCAAAA TERM 1426 1009821 - 1009853 + GF 71 -3.3 -4.84146 | overlap 1009826 GATGGCTTACGGCAG CATTGGGGTAGGCAG CAG CTTTCTCCCCTGGTG TTTATTTTGTGTCCT pqiA 1009321 - 1010574 + | paraquat-inducible protein A TERM 1427 1011369 - 1011383 + GF 70 -4.3 -4.58424 | GGCAGCCAGTGGCAC CGAAA ACAGC TTTCG TTTTGTATGATGATC pqiB 1010519 - 1012219 + | paraquat-inducible protein B ymbA 1012216 - 1012779 + | hypothetical protein TERM 1428 1012802 - 1012828 + F 100 -10.8 -6.02919 | opp_overlap 1012802 GATTTGTAAATATAA CCGTCTCCGGTA TGT TGCCTGAGGCGG TTTTTTTGTTTCTAA TERM 1429 1012968 - 1012994 + F 73 -3 -5.07652 | overlap 1012970 CGCGGTATTGCTTAA CTGTGATTGC ATATTTA GTAATCACTG TTTTCTTTTCCACCA rmf 1013035 - 1013202 + | ribosome modulation factor TERM 1430 1013217 - 1013247 + T 74 -8.2 -4.12475 | opp_overlap 1013220 1013224, overlap 1013224 ATTCTGTCTCTTTAA AAAGAAACCTCCGC ATT GCGGAGGTTTCGCC TTTATATACTCTGTC TERM 1431 1013244 - 1013220 - T 100 -18.7 -4.56597 | opp_overlap 1013217 1013224, overlap 1013224 CTGTCTCTTTAAAAA GAAACCTCCGC ATT GCGGAGGTTTC GCCTTTATATACTCT TERM 1432 1013240 - 1013224 - T 100 -13.7 -4.85782 | opp_overlap 1013217 1013224, overlap 1013220 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTATATA TERM 1433 1013224 - 1013240 + T 100 -13.7 -3.75418 | opp_overlap 1013224 1013220, overlap 1013217 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTATATA fabA 1013790 - 1013272 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase UTI89_C1020 1015619 - 1013859 - | putative protease La-like protein ycbG 1015805 - 1016257 + | hypothetical protein TERM 1434 1016314 - 1016299 - T 100 -11.8 -6.10489 | opp_overlap 1016299 AAGGCGAAAAAAAAA CCCCGC AGCT GCGGGG TTTTTCTACCAGACG TERM 1435 1016299 - 1016314 + T 100 -11.8 -4.82901 | opp_overlap 1016299 AAGGCGAAAAAAAAA CCCCGC AGCT GCGGGG TTTTTCTACCAGACG ompA 1017462 - 1016335 - | outer membrane protein A UTI89_C1023 1017529 - 1017747 + | hypothetical protein sulA 1018246 - 1017731 - | SOS cell division inhibitor yccR 1018459 - 1019088 + | hypothetical protein yccS 1021213 - 1019051 - | hypothetical protein TERM 1436 1019806 - 1019780 - G 77 -2.9 -5.16572 | gap 1, overlap 1019782 1019785 1019800 ACGGAAGGCAAAAAA GAGCACGCCGGT AATA ACCAGCA-GCAC CAACTGCCCTTCCAG TERM 1437 1019948 - 1019937 - G 72 -4.4 -4.62441 | TGGCAGACAAACAAA CTTG TCAG CAAG ATCCAATACCCGTGA TERM 1438 1020358 - 1020333 - G 72 -8.3 -3.745 | gap 1, overlap 1020335 TGACGCAGCAAAATA CA-GCGTGACAG TTG CTGGCACGCCTG GCCCTGCATCGACAT TERM 1439 1020355 - 1020335 - G 78 -11.1 -3.45073 | overlap 1020333 ACGCAGCAAAATACA GCGTGACAG TTG CTGGCACGC CTGGCCCTGCATCGA yccF 1021669 - 1021223 - | hypothetical protein TERM 1440 1021255 - 1021267 + g 71 -9.1 -3.52906 | overlap 1021258 GTGCATTGGCTTCGC GCGCA GCT TGCGC TGTTTCTACCGATAC TERM 1441 1021590 - 1021576 - G 75 -5 -4.74103 | GTGGTAAGGTAAAAA TCAGCA CAA TACTGA CCAGAGTCGCCAACA helD 1021792 - 1023846 + | DNA helicase IV TERM 1442 1023870 - 1023851 - T 100 -13.6 -4.24711 | opp_overlap 1023847 1023844 GAAAACCGTAAGAAA CAGGTGGC GTTT GCCACCTG TGCAATATTACTTCA mgsA 1024345 - 1023878 - | methylglyoxal synthase TERM 1443 1024422 - 1024409 - R 86 -8.1 -4.7889 | overlap 1024411 ATAAAGACTGAAAAA GCCTG CGCA CAGGC ACAAAAATCTCAGGA yccT 1025094 - 1024432 - | hypothetical protein TERM 1444 1025445 - 1025427 - gH 78 -8.8 -4.08064 | overlap 1025429 AAGTTGCCGGCAAAA CACTGCTG GGC CAGCAGGG GTATGGCACGCTGGC TERM 1445 1025443 - 1025429 - gH 78 -10 -3.63744 | overlap 1025427 GTTGCCGGCAAAACA CTGCTG GGC CAGCAG GGGTATGGCACGCTG UTI89_C1031 1025186 - 1025680 + | hypothetical protein TERM 1446 1025712 - 1025685 - gT 100 -17.8 -5.63517 | opp_overlap 1025685 TGGCCAAATAAAAAA TCCCCGGAAGGC AAAA ACCTTCCGGGGA TTTGTTCAGGGATTA TERM 1447 1025685 - 1025712 + GT 100 -17.1 -4.1673 | opp_overlap 1025685 TGGCCAAATAAAAAA TCCCCGGAAGG CAAAAA CCTTCCGGGGA TTTGTTCAGGGATTA yccV 1026093 - 1025725 - | hypothetical protein UTI89_C1032 1025649 - 1026044 + | hypothetical protein yccW 1027290 - 1026100 - | hypothetical protein TERM 1448 1026215 - 1026236 + gFH 72 -5.9 -4.40358 | gap 1, opp_overlap 1026219, overlap 1026219 ACATCACGACCGGCA TCAATTGCGG CAT CCGCGAT-GA TTTTCTGAAATAAAT TERM 1449 1026767 - 1026795 + gFH 70 -3.8 -4.64763 | overlap 1026769 GGCGGCAACTCGCCG GTGATGGGGC CCTGAGTCA GCTCCATCCC TTCTTTTTTACGTAC UTI89_C1035 1027265 - 1027663 + | putative acylphosphatase TERM 1450 1027683 - 1027708 + Tr 75 -9.7 -3.54935 | ATTTTACCGGTTTAG GCAGGCCAGCA ATTT TGGTGGCTTGC TTTGCCGGACCTTTC yccK 1027989 - 1027660 - | sulfurtransferase TusE TERM 1451 1027724 - 1027755 + g 91 -8 -5.06414 | opp_overlap 1027729 TTTGCCGGACCTTTC GGAAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCGCCAAA TERM 1452 1027904 - 1027931 + g 75 -6.9 -4.44046 | opp_overlap 1027902, overlap 1027902 1027905 1027907 1027926 TTCTCTGCAATCACC ACCGCCAGTGG TTCACT CCACTGGCTGC TTTCTTTGAGATAGC TERM 1453 1027905 - 1027930 + g 70 -10.4 -3.25946 | opp_overlap 1027902, overlap 1027902 1027904 1027907 1027926 TCTCTGCAATCACCA CCGCCAGTGG TTCACT CCACTGGCTG CTTTCTTTGAGATAG TERM 1454 1027907 - 1027928 + g 77 -11.6 -3.18854 | opp_overlap 1027902, overlap 1027902 1027905 1027904 1027926 TCTGCAATCACCACC GCCAGTGG TTCACT CCACTGGC TGCTTTCTTTGAGAT TERM 1455 1028061 - 1028035 - R 95 -7.9 -5.46657 | overlap 1028039 CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTCGG TAAGTAACCCTGGGC TERM 1456 1028057 - 1028039 - R 100 -9.5 -5.20735 | overlap 1028035 GTAACAAAAAACAAA GCCCCGC ATAAA GCGAGGC TCGGTAAGTAACCCT yccA 1028740 - 1028081 - | hypothetical protein TERM 1457 1028522 - 1028535 + g 70 -5.2 -4.42386 | GGAGATAATCCCGGT CGGC TTATTC GCCG TTTTGTAGGTCAGGA TERM 1458 1028909 - 1028941 + H 79 -9.2 -3.90744 | opp_overlap 1028914, overlap 1028914 TTCGACAGGCAAAAG AAAAAGGGGTTAGC ATTTA GCTAACCCCTTATC TTATTTGGCGGAAGC TERM 1459 1028914 - 1028936 + H 100 -13.5 -3.90464 | opp_overlap 1028914, overlap 1028909 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG TERM 1460 1028936 - 1028914 - H 100 -13.5 -5.48213 | opp_overlap 1028914 1028909 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG TERM 1461 1030431 - 1030443 + G 71 -9.1 -3.54459 | overlap 1030437 1030439 GTACCCATTCCACCG CCGAC ACC GTCGG TTTAACCGCGCTTGG hyaA 1029434 - 1030579 + | hydrogenase-1 small chain precursor TERM 1462 1031787 - 1031773 - g 88 -11.4 -3.72893 | TACTCGTGGATCAAA GCGCCA CGC TGGCGC GGTAACGCGATGGAA TERM 1463 1032025 - 1032012 - g 72 -4.5 -4.67904 | overlap 1032013 GACCAACCTGAAAAA CGGCA ATCT TGCCA CCGCTTCCACGGAAA hyaB 1030576 - 1032369 + | hydrogenase 1 large subunit hyaC 1032388 - 1033095 + | hydrogenase 1 b-type cytochrome subunit hyaD 1033092 - 1033679 + | hydrogenase 1 maturation protease hyaE 1033676 - 1034074 + | hydrogenase-1 operon protein HyaE hyaF 1034071 - 1034928 + | hydrogenase-1 operon protein HyaF TERM 1464 1035499 - 1035534 + G 70 -5.4 -4.34402 | gap 1, opp_overlap 1035499 GTTGTGGATATTGAA TGC-CAACGGTTGGATG CAA TACCCGACCGGTGCGCA TTTTGATATCGACAC TERM 1465 1035978 - 1035968 - g 77 -8.2 -4.0942 | CACTCATTAGATAAA CCCG TGC CGGG TCTGAAGAATTTGAT appC 1035062 - 1036606 + | third cytochrome oxidase, subunit I appB 1036618 - 1037754 + | putative third cytochrome oxidase subunit II yccB 1037767 - 1037859 + | hypothetical protein TERM 1466 1037900 - 1037869 - f 95 -14.4 -3.24166 | overlap 1037864 AGTTAACGAAGGTAA GCCTGATGAGGCGC ATTA GCGTCGCATCAGGC AATCAATAATGTCGG TERM 1467 1038307 - 1038293 - g 77 -10 -3.65542 | overlap 1038282 1038291 CGTACCCGTAAAACA GGCGAA GCC TTCGCC GCCGGGCTGGCACCT TERM 1468 1038406 - 1038393 - g 72 -4.5 -4.59853 | overlap 1038394 TTAATCCTCTAAAAA CTGGC GTTT GCCAA CTGGATAACGCGAAT appA 1037909 - 1039249 + | phosphoanhydride phosphorylase cspH 1039449 - 1039237 - | cold shock-like protein H cspG 1039735 - 1039947 + | cold shock protein CspG TERM 1469 1040152 - 1040168 + G 100 -9.4 -5.4251 | opp_overlap 1040149 1040152 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCTGCC sfa 1040088 - 1040351 + | cold shock gene UTI89_C1054 1040529 - 1040356 - | hypothetical protein gnsB 1040341 - 1040514 + | protein that affects unsaturated fatty acid abundance TERM 1470 1040519 - 1040551 + gT 71 -7.8 -3.79909 | gap 1, opp_overlap 1040511 1040526, overlap 1040518 AAATAATGTGATTTT GT-GAACATCACCCC GTGC GAGGTGATGTTCCGC TTGTTGCTAATTTAG yccM 1041636 - 1040563 - | putative electron transport protein YccM TERM 1471 1041599 - 1041620 + g 100 -2.9 -5.71712 | gap 1, overlap 1041603 1041604 CCGCCCGTCGTGCCT GGCCGCCGCT GCC AGCGG-GTTC TTTTTTTCTCTGCCA TERM 1472 1041603 - 1041617 + g 80 -5.6 -4.92669 | overlap 1041599 1041604 CCGTCGTGCCTGGCC GCCGCT GCC AGCGGG TTCTTTTTTTCTCTG TERM 1473 1041604 - 1041616 + g 71 -9.1 -3.53161 | overlap 1041603 1041599 CGTCGTGCCTGGCCG CCGCT GCC AGCGG GTTCTTTTTTTCTCT torS 1044451 - 1041719 - | hybrid sensory histidine kinase TorS TERM 1474 1043349 - 1043361 + g 70 -5.5 -4.30719 | overlap 1043342 1043350 CCATCCAGCAAGCGT TGCAG CGC CTGCG TTTGTTCTGCAAGAG TERM 1475 1044659 - 1044681 + G 72 -7.6 -3.91072 | opp_overlap 1044660, overlap 1044660 GCCGCTAAAAGCCAA ACGCGCATGG AAA CTGTGCGCGC TTTATCCCAGTTTGA TERM 1476 1044660 - 1044680 + G 71 -11.1 -2.94161 | opp_overlap 1044660, overlap 1044659 CCGCTAAAAGCCAAA CGCGCATGG AAA CTGTGCGCG CTTTATCCCAGTTTG TERM 1477 1044688 - 1044710 + G 71 -9.2 -3.52093 | TGTGCGCGCTTTATC CCAGTTTGAA AGA TTCATACTGG TTATCGTTGAACTAT TERM 1478 1045195 - 1045165 - g 72 -8.2 -3.7456 | overlap 1045189 ATAACGATATTGAAA TCCAGCGTAACCTG CTG CAGGAGATGCTGGA ACGCCATCCAGAAAT TERM 1479 1045422 - 1045449 + G 70 -5.6 -4.30576 | gap 1 CAATTACAGGGGCAA TCGGT-GTCTGAT AAT GTCAGCCCACCGA TTTTAGTCATGACGC torT 1044534 - 1045562 + | periplasmic sensory protein associated with the TorRS two-component regulatory system torR 1046227 - 1045535 - | DNA-binding transcriptional regulator TorR torC 1046319 - 1047539 + | cytochrome c-type protein TorC TERM 1480 1047901 - 1047912 + GF 72 -5.8 -4.38712 | CGACACCTCCCAACG CGGT GATA ACCG TTTTGTGCGCGTGAG TERM 1481 1048314 - 1048304 - gf 72 -6.8 -4.21908 | overlap 1048311 TACGAGCAGCTAAAA GCGA AAG TCGC CGCCGGTGAAATTGA torA 1047539 - 1050085 + | trimethylamine-N-oxide reductase 1 precursor torD 1050049 - 1050681 + | chaperone protein TorD TERM 1482 1050935 - 1050987 + T 71 -4 -4.84359 | gap 1, opp_overlap 1050908 1050960, overlap 1050908 1050952 GCATCAGGCATTATG GCGCAGTTGCCGGATGCGGCGAGAA CGCC TTATC-CGGCCTACGGGAACAGCGC TTTTTGTGGGCCTGA TERM 1483 1051058 - 1051088 + T 86 -14 -2.73364 | opp_overlap 1051056 1051055 1051063, overlap 1051064 GTGAGCCACAAACCG GGAAAGCCGCTGGC GCA GCAGGCGGTTTTCC TGCTTCAGGTGCGCA yccD 1051342 - 1051037 - | chaperone-modulator protein CbpM TERM 1484 1051064 - 1051082 + g 78 -8 -4.3534 | opp_overlap 1051063 1051056 1051055, overlap 1051058 CACAAACCGGGAAAG CCGCTGGC GCA GCAGGCGG TTTTCCTGCTTCAGG cbpA 1052262 - 1051342 - | curved DNA-binding protein CbpA TERM 1485 1051462 - 1051476 + g 86 -6.4 -5.14563 | overlap 1051471 TTTCAGTACCGCATA CAGATC GCC GGTCTG TTTTTTGCTCACCAG TERM 1486 1051982 - 1051962 - G 72 -6.9 -4.18494 | overlap 1051977 CATGCTGACCGAAAA TTGACGAGA AGA TATCGTCAA AATCTTCGGCGTTAA TERM 1487 1052648 - 1052676 + H 77 -6.9 -4.56775 | gap 1, opp_overlap 1052650 GAGGCCGGGGCTAAT CAGGCATAGTTT GCGTCA AAACT-TGCCTG TTTTTAAAGGGGAAT agp 1052797 - 1054038 + | glucose-1-phosphatase/inositol phosphatase TERM 1488 1054068 - 1054046 - T 100 -16.3 -4.84673 | opp_overlap 1054042 TGAAATAACAGAAAA CTCCCCCGC GTGAA GCGGGGGAG TCGCTGGTTAAACGT yccJ 1054303 - 1054076 - | hypothetical protein wrbA 1054920 - 1054324 - | TrpR binding protein WrbA TERM 1489 1055175 - 1055190 + H 79 -11.8 -2.55015 | opp_overlap 1055175, overlap 1055171 CAGGATATTACCAAA CGCGGG TCTG CCCGCG TCAGTTCACTAAGCT TERM 1490 1055190 - 1055175 - H 93 -11.8 -3.82665 | opp_overlap 1055175 1055171 CAGGATATTACCAAA CGCGGG TCTG CCCGCG TCAGTTCACTAAGCT TERM 1491 1055240 - 1055225 - H 74 -7.6 -4.19817 | opp_overlap 1055232 CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTAATTCT UTI89_C1068 1055324 - 1055482 + | hypothetical protein TERM 1492 1055522 - 1055540 + G 100 -13.1 -4.84918 | opp_overlap 1055519 GTCAAAAAGCCATCA CCGCCGG TTACC CCGGCGG TTTTCTGTTTATGGC UTI89_C1069 1055479 - 1055616 + | hypothetical protein nmoB 1057367 - 1056792 - | 4-hydroxyphenylacetate 3-monooxygenase small chain UTI89_C1071 1057887 - 1057297 - | hypothetical protein TERM 1493 1057457 - 1057444 - GR 77 -9.5 -3.57792 | GTATTGACGGTCAAA GCCCG ACAT CGGGC CGGTATCCAGCCCCA ycdJ 1058724 - 1057897 - | hypothetical protein ycdK 1059091 - 1058705 - | hypothetical protein ycdL 1059837 - 1059103 - | isochorismatase family protein YcdL TERM 1494 1059292 - 1059274 - GR 79 -2.2 -5.26918 | opp_overlap 1059275 1059276 1059276, overlap 1059275 1059276 ATACTCCAGAAAAAA GCCGTCGC GTA GCGTCGAT TCTACGCAGACGTTG ycdM 1060976 - 1059795 - | putative monooxygenase YcdM TERM 1495 1061249 - 1061236 - g 82 -2.3 -5.45652 | overlap 1061222 AGCGCGAAGAAAAAA GCGAT TCTT AGCGC AGCACTGGACACTTT ycdC 1061146 - 1061811 + | transcriptional regulator YcdC TERM 1496 1061813 - 1061846 + T 74 -10.9 -2.61144 | opp_overlap 1061813 1061815 1061816, overlap 1061811 1061813 TTCGACCACGTTAAA GATGCCGGAGGAGGT TGTA ACATCCTCCGGCTAC CTGTTTAACCGATCG TERM 1497 1061847 - 1061813 - T 87 -11.5 -3.62096 | gap 1, opp_overlap 1061813 1061811 1061813, overlap 1061815 1061816 TTCGACCACGTTAAA GAT-GCCGGAGGAGGT TGTA ACATCCTCCGGCTACC TGTTTAACCGATCGT TERM 1498 1061813 - 1061847 + T 71 -9.3 -3.35775 | gap 1, opp_overlap 1061813 1061815 1061816, overlap 1061813 1061811 TTCGACCACGTTAAA GAT-GCCGGAGGAGGT TGTA ACATCCTCCGGCTACC TGTTTAACCGATCGT TERM 1499 1061844 - 1061815 - T 85 -12.1 -3.39018 | opp_overlap 1061813 1061813 1061811, overlap 1061813 1061816 CGACCACGTTAAAGA TGCCGGAGGAGGT TGTA ACATCCTCCGGCT ACCTGTTTAACCGAT TERM 1500 1061843 - 1061816 - T 93 -15.6 -2.63089 | opp_overlap 1061813 1061813 1061811, overlap 1061815 1061813 GACCACGTTAAAGAT GCCGGAGGAGGT TGTA ACATCCTCCGGC TACCTGTTTAACCGA TERM 1501 1061885 - 1061870 - T 80 -10.4 -3.73775 | opp_overlap 1061879 CCGATCGTCATTAAA CTGGCG TTAC CGCCAG CAGCAGCGGTATTCA putA 1065813 - 1061851 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1502 1063867 - 1063881 + g 75 -5.7 -4.62336 | opp_overlap 1063876 CGATTGTTCCAGCAT TGGCA AGGAC TGCCA TTTTTGCAGTGCACT TERM 1503 1065381 - 1065394 + g 93 -2.3 -5.63103 | opp_overlap 1065377 CCTGAACCATACCTG CGCGA CCAC TGGCG TTTTTTTGATTACGC TERM 1504 1065507 - 1065491 - G 70 -10.9 -2.82516 | overlap 1065495 TGTTCCAGCAGCATA GAAACCG CTT CGGTTTC CGGGCGGCGATAGGC UTI89_C1078 1065868 - 1066077 + | hypothetical protein putP 1066236 - 1067744 + | sodium/proline symporter TERM 1505 1067818 - 1067788 - f 87 -14.1 -2.76453 | opp_overlap 1067788 1067789, overlap 1067779 TCATAACCGGAAGCA GGCAGAGGGCAAT CAGTT ATTGCCCTCTGCG TTTTTTCTCAAAATA TERM 1506 1067788 - 1067818 + F 100 -14.1 -5.252 | opp_overlap 1067779 1067788, overlap 1067789 TCATAACCGGAAGCA GGCAGAGGGCAAT CAGTT ATTGCCCTCTGCG TTTTTTCTCAAAATA TERM 1507 1067789 - 1067817 + F 100 -17.6 -3.74397 | opp_overlap 1067788, overlap 1067788 CATAACCGGAAGCAG GCAGAGGGCAAT CAGTT ATTGCCCTCTGC GTTTTTTCTCAAAAT UTI89_C1080 1067955 - 1068794 + | hypothetical protein ycdO 1068852 - 1069979 + | hypothetical protein TERM 1508 1070028 - 1070005 - g 90 -9.6 -4.44797 | opp_overlap 1070003 1070019, overlap 1070019 GTATGAAGATGAAAA CGGCGTGA ATGAACCG TCACGCCG ACGTTTACTGAAAGG TERM 1509 1070107 - 1070097 - g 95 -6.8 -5.28176 | CTCATGCACAAAAAA CGCA AAG TGCG CCGGGTACGCTTTCA ycdB 1069985 - 1071256 + | hypothetical protein TERM 1510 1071353 - 1071390 + F 72 -7.5 -4.12188 | opp_overlap 1071366 AATCGGTGCGGGTCG GTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCAAGC TTTTACCAGTACTGC TERM 1511 1071831 - 1071848 + G 70 -10.5 -2.80816 | opp_overlap 1071831 1071830 GTTCGTGCGCATAAT CGCGCTG CCAA CGGCGCG TGTGATGAATACAAA TERM 1512 1072655 - 1072622 - g 82 -13.3 -2.84504 | gap 1, overlap 1072619 1072617 ATTCGGTAAAGAGGA TTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTA CATGCATACAGTTAA phoH 1071747 - 1072670 + | hypothetical protein TERM 1513 1072685 - 1072709 + T 100 -13.6 -4.323 | overlap 1072689 AGTGTATTATCGGCG CAGAGCCCGG GCGAA CCGGGCTTTG TTTTGGGTGTTTACG TERM 1514 1072689 - 1072705 + T 95 -10.8 -4.71418 | overlap 1072685 TATTATCGGCGCAGA GCCCGG GCGAA CCGGGC TTTGTTTTGGGTGTT ycdP 1073133 - 1072720 - | hypothetical protein ycdQ 1074460 - 1073135 - | N-glycosyltransferase PgaC ycdR 1076471 - 1074453 - | lipoprotein YcdR precursor ycdS 1078903 - 1076480 - | outer membrane protein PgaA TERM 1515 1077889 - 1077910 + g 100 -4.3 -5.48825 | opp_overlap 1077889, overlap 1077894 CCTTGTGATAAAAGA GCTCTGTCA TTAT TGACTGTGC TTTTTTTGGCTGCTG TERM 1516 1079390 - 1079358 - H 72 -7.9 -3.918 | opp_overlap 1079367, overlap 1079359 ATATAAAGCATTAAA GTGATAATAATTGCA TTC TGCAACTATCATCAT CGGTATTGTTTGTGG TERM 1517 1079389 - 1079359 - H 78 -11.4 -2.93995 | opp_overlap 1079367, overlap 1079358 TATAAAGCATTAAAG TGATAATAATTGCA TTC TGCAACTATCATCA TCGGTATTGTTTGTG ycdT 1079368 - 1080858 + | hypothetical protein TERM 1518 1080928 - 1080951 + F 81 -9.6 -3.98913 | opp_overlap 1080930, overlap 1080930 CAATATACGAAAAAA AAGCTCGTAC TTTC GTACGAGCTC TTCTTTAAATATGGC TERM 1519 1080930 - 1080949 + F 89 -12.2 -3.58256 | opp_overlap 1080930, overlap 1080928 ATATACGAAAAAAAA GCTCGTAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1520 1080949 - 1080930 - f 100 -12.2 -5.92337 | opp_overlap 1080930 1080928 ATATACGAAAAAAAA GCTCGTAC TTTC GTACGAGC TCTTCTTTAAATATG UTI89_C1089 1081137 - 1082339 + | P4 family integrase TERM 1521 1082472 - 1082492 + T 80 -6.9 -4.83615 | opp_overlap 1082470 1082472 GTATTTTGATTAACA GGGGATT ACTTAAC AATCCCC TTTTTATAAAAAATA UTI89_C1090 1084343 - 1082526 - | hypothetical protein TERM 1522 1084499 - 1084469 - H 71 -10.4 -2.77148 | opp_overlap 1084468 1084466 1084465, overlap 1084466 1084477 CGTATTAACAGATTA TGTCAGAAGGCCCC GGT GATGCCTTCTGACG ATAGATTAATGTGGT UTI89_C1091 1084628 - 1084792 + | hypothetical protein UTI89_C1092 1084840 - 1085304 + | putative transposase UTI89_C1093 1085457 - 1085753 + | prophage regulatory protein TERM 1523 1085893 - 1085859 - f 76 -10 -3.35597 | opp_overlap 1085862 1085866, overlap 1085857 TTCATTGTTGAAAGA GCAGCTATTGTCGCTA TTG TAGCGGTAATTGCTGC TATAACCGAAACGTA TERM 1524 1086323 - 1086361 + F 100 -16.2 -4.25848 | opp_overlap 1086325 AGCATCAGGTCTGAA TAGCAGCTATTTTCGCTA TTG TAGCGGAAGTTGCTGCTA TTTTACTAACCCATT TERM 1525 1086359 - 1086325 - f 73 -10 -3.03441 | opp_overlap 1086323 CATCAGGTCTGAATA GCAGCTATTTTCGCTA TTG TAGCGGAAGTTGCTGC TATTTTACTAACCCA yfjI 1086378 - 1087829 + | hypothetical protein TERM 1526 1087884 - 1087854 - f 73 -10.5 -3.12895 | opp_overlap 1087853 1087849, overlap 1087857 TCGTTGAGTAACATA TAATCTCCTCTGC TACTT GCGGAGGAGACTA ATGCCTTTACCATGT TERM 1527 1087881 - 1087857 - f 78 -10 -3.70722 | opp_overlap 1087853 1087849, overlap 1087854 TTGAGTAACATATAA TCTCCTCTGC TACTT GCGGAGGAGA CTAATGCCTTTACCA TERM 1528 1088171 - 1088202 + F 93 -11.7 -4.06361 | GTGTAATGCGTCTAT CCCCATATACTAC AGTGTG GTGGTGTATGGGG TTTAGTTATGTGTAA TERM 1529 1088423 - 1088433 + F 78 -5.4 -4.90869 | overlap 1088416 1088412 TGTGGGCTCTCTCTG CAGA GTC TCTG TTTTTACTTAATGGT UTI89_C1095 1088785 - 1089378 + | hypothetical protein UTI89_C1096 1089734 - 1089477 - | hypothetical protein UTI89_C1097 1089480 - 1089686 + | hypothetical protein TERM 1530 1089798 - 1089774 - TR 91 -12.9 -3.16039 | opp_overlap 1089768 AAGTATGCGCAGGAA CAGCAGGGG GACTAAG CCCCTGCTG CCGGTTTTGCCGGGT UTI89_C1098 1091855 - 1089855 - | hypothetical protein TERM 1531 1090561 - 1090586 + gTr 73 -10.5 -3.03124 | gap 1 AATAGATTCGGGTTT GCTCTGC-GCAT ATT GTGCAGCAGAGC TATTGACGCATCAAA TERM 1532 1090802 - 1090790 - GTR 75 -9.1 -3.59979 | CTTTTGCATGCGAAA CGCGA ACG TCGCG CGGCTTATTGTAACC TERM 1533 1090967 - 1090957 - GTR 77 -6.8 -4.46212 | TCGTCCAGCAGAAAA GCGT CTA ACGC CACTCCGCGGCCGCT UTI89_C1099 1092936 - 1091770 - | putative aminotransferase UTI89_C1100 1093336 - 1093070 - | tagatose-bisphosphate aldolase 2 UTI89_C1101 1093981 - 1093358 - | hypothetical protein UTI89_C1102 1094297 - 1094034 - | hypothetical protein TERM 1534 1095303 - 1095316 + H 76 -3.7 -5.06414 | overlap 1095304 CCTTCTTTACCACGT TGGCG AGGC CGCCC TTTTTGTTGCCCGGC UTI89_C1103 1095846 - 1096370 + | hypothetical protein TERM 1535 1096437 - 1096455 + GT 70 -3.7 -4.63218 | overlap 1096438 AAGCCTTAATTTCAG AGCCGGG AGACA TCCGGCG TTTTGTTCAGCAGGC UTI89_C1105 1096609 - 1096433 - | hypothetical protein UTI89_C1104 1096409 - 1096921 + | hypothetical protein UTI89_C1106 1097163 - 1097732 + | hypothetical protein TERM 1536 1097815 - 1097785 - T 100 -9.1 -5.26875 | gap 1 GGCGTAACGAAAAAA CAGCCTCCGTTACC GGAT AGCAA-GGAGGCTG AATGGAGTTTACAGG sfaC 1098291 - 1098007 - | putative S fimbrial switch regulatory protein TERM 1537 1098165 - 1098179 + g 72 -7.1 -4.21676 | TTACCGCCAGCGCCT CCGCA ATTTC TGCGG TTTTCCCTCCATTAT sfaB 1098647 - 1098976 + | putative S fimbrial switch regulatory protein TERM 1538 1099621 - 1099636 + G 84 -4 -5.24129 | overlap 1099609 GATTCCACAACATCT GGATCT GTGA AGATTC TTTTTTCTGGCACAC sfaA 1099351 - 1099896 + | S fimbriae major subunit SfaA TERM 1539 1099925 - 1099940 + F 71 -3.9 -4.87665 | TAACGGATATATACC CGGCC AGGGAG GGCTG TTTTTATCCATGCGG sfaD 1099958 - 1100506 + | S fimbriae minor subunit SfaD sfaE 1100547 - 1101242 + | S fimbriae periplasmic chaperone SfaE TERM 1540 1101403 - 1101413 + G 95 -6.8 -5.252 | opp_overlap 1101402 TGAAATTTAATATAC TGCC GCT GGCA TTTTTTATCGGGATA TERM 1541 1101532 - 1101558 + G 81 -9.5 -4.07124 | gap 1, opp_overlap 1101521, overlap 1101533 CACAGGGGCAGGAGC T-TCCGCCCGGT GTGT ACCGGGTGGATA TTTATCTGAATGATA TERM 1542 1101533 - 1101556 + G 100 -14.6 -3.6269 | opp_overlap 1101521, overlap 1101532 ACAGGGGCAGGAGCT TCCGCCCGGT GTGT ACCGGGTGGA TATTTATCTGAATGA TERM 1543 1102665 - 1102687 + G 70 -4.1 -4.60797 | TTACCGGATGAAAGC CGGCATGAC GGTCA GTCATATCG TTTTCTGTATAACAA TERM 1544 1103116 - 1103077 - g 78 -9.4 -3.93038 | gap 1, opp_overlap 1103078 1103086 1103112 CATGGCAACATGAAA CTGACCGG-ATACTGTCAT TTG ATGTCAGCATTCCGTTCAG CCACTGGATGCGTTC sfaF 1101264 - 1103942 + | S fimbriae outer membrane usher sfaG 1103955 - 1104482 + | S fimbriae minor subunit SfaG sfaS 1104504 - 1104995 + | S fimbriae minor subunit SfaS TERM 1545 1105040 - 1105019 - g 75 -5.7 -4.63218 | opp_overlap 1105020, overlap 1105020 CCCTCTTTAAGAAAA GCACCGTCC TTAA GGGCGGTGT TTTATTCACACTTAT TERM 1546 1105020 - 1105039 + G 100 -11.4 -4.65747 | opp_overlap 1105019 1105020 CCTCTTTAAGAAAAG CACCGTCC TTAA GGGCGGTG TTTTATTCACACTTA TERM 1547 1105335 - 1105301 - g 72 -5.8 -4.34402 | gap 1, overlap 1105305 1105306 CTCTGGATACCAAAA CATACGGACGACTCG ATTTTA CAAGTCGTCCA-ACG GGGTATGCCAGGCAA TERM 1548 1105332 - 1105305 - g 74 -9.9 -3.46858 | overlap 1105301 1105306 GGATACCAAAACATA CGGACGACTCG ATTTTA CAAGTCGTCCA ACGGGGTATGCCAGG sfaH 1104988 - 1105956 + | S fimbriae minor subunit SfaH UTI89_C1116 1106260 - 1107000 + | hypothetical protein focX 1107147 - 1107698 + | putative regulatory protein TERM 1549 1110151 - 1110136 - g 79 -4.6 -4.9792 | TATGGCAGACAAAAA CCGCGT ACTC ATGCGG AAACCCGCAGTGAAG iroN 1108192 - 1110369 + | outer membrane receptor FepA TERM 1550 1110387 - 1110412 + T 100 -12.6 -3.79668 | overlap 1110389 GTAGTGTTTCAGGCG TACTGCCCGC GTAAAA GCGGGCAGTG TTTAGTGGCTTAACT TERM 1551 1110389 - 1110410 + T 100 -13 -3.48105 | overlap 1110387 AGTGTTTCAGGCGTA CTGCCCGC GTAAAA GCGGGCAG TGTTTAGTGGCTTAA iroE 1111370 - 1110414 - | IroE protein TERM 1552 1111032 - 1111042 + g 82 -3.2 -5.25803 | CCCGACAGCCACGAT CACT GGC GGTG TTTTTTCTGACAATT TERM 1553 1111130 - 1111118 - G 91 -9.1 -4.64591 | CAAGCATATATAAAA TCGGG TAA CCCGA TGCCGGTGCGGTTGT iroD 1112684 - 1111455 - | IroD protein iroC 1116573 - 1112788 - | IroC protein TERM 1554 1114152 - 1114162 + g 77 -8.2 -4.07568 | opp_overlap 1114139 GACTGGTGGCCGCAC CGGC AAG GCCG TTTTGCAGAAAGCGG TERM 1555 1114656 - 1114673 + g 70 -9.9 -3.21924 | overlap 1114639 1114636 1114654 TCGCTGGTTCAGCCG GCCACAA TTCG TTGTGGC TATTGTGGGACGTGG TERM 1556 1115180 - 1115162 - G 71 -3.1 -4.78848 | overlap 1115157 1115175 CCGGCAAACAGAAAA GCATCTT CAAAT ACGATGC CTACCCGGCGACGAA TERM 1557 1116022 - 1116059 + g 74 -10.7 -3.1552 | gap 1, opp_overlap 1115999, overlap 1116023 TGCCAGCGGCACCGG GCACATCTGCAGCAGG GTATGCA CCTGCTGCAGATC-GC TGTTGGTCCGTGAAA iroB 1117750 - 1116587 - | putative glucosyltransferase TERM 1558 1117563 - 1117576 + g 73 -3.7 -4.8543 | opp_overlap 1117534 1117563, overlap 1117564 TCAAACACCACCAAC CCGGC CTCT GCCGC TTTTTGTGCGAATTG UTI89_C1123 1118244 - 1118558 + | hypothetical protein TERM 1559 1118572 - 1118545 - T 70 -9.2 -3.17212 | opp_overlap 1118536 1118544 1118546, overlap 1118546 CCATTACTGGAGTAA TGCCAGTCAATT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT TERM 1560 1118546 - 1118571 + T 82 -10.5 -3.90762 | opp_overlap 1118545 1118546, overlap 1118536 1118544 CATTACTGGAGTAAT GCCAGTCAATT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 1561 1118571 - 1118546 - T 81 -12.7 -2.50113 | opp_overlap 1118536 1118546 1118544, overlap 1118545 CATTACTGGAGTAAT GCCAGTCAATT AAGC AACTGACTGGC TCTTTTTCGGGGCTG UTI89_C1124 1118959 - 1118597 - | hypothetical protein TERM 1562 1119287 - 1119272 - H 73 -4.8 -4.65895 | TGTCTTACTGAAAAA TGAATA TAGA TATTCA TCTGGCGATTTGAGA TERM 1563 1119450 - 1119460 + H 79 -2.6 -5.4505 | AACGTTTTACGGATA TAAA AAG TTTA TTTTTTGTTAAGAGA TERM 1564 1119502 - 1119513 + H 86 -3.6 -5.60993 | CAGACAACTTGAACT CGCT GCAG GGCG TTTTTTTATGCCCGA UTI89_C1125 1119826 - 1120260 + | hypothetical protein TERM 1565 1120814 - 1120844 + T 100 -17.1 -3.14564 | opp_overlap 1120828 TCTCCCTGTGCGGCT GTCTCTTGATCAG ATCTC CTGATCAAGAGAC TTCATCACCAGGTAA UTI89_C1127 1121281 - 1120823 - | putative transposase TERM 1566 1120976 - 1120996 + g 70 -5.3 -4.41895 | GGCCCATTTCAGTGT CGGCGTCTG TGA CGGAAGCTG TTTTCCTTCCAGCTT TERM 1567 1121268 - 1121281 + g 76 -3.7 -4.95155 | opp_overlap 1121256, overlap 1121267 1121266 ATACGTCGCGCATCG GCGGC ACTC GCCAC TTTTTCTGATGTCAG UTI89_C1128 1122186 - 1121293 - | hypothetical protein TERM 1568 1121421 - 1121435 + g 76 -12.8 -2.55361 | overlap 1121420 1121421 TGAACATCCGGGCCT GGCGGG CTG CCCGCC CTCCTTTTTGCATCA TERM 1569 1121421 - 1121439 + g 81 -7.3 -4.67011 | overlap 1121420 1121421 TGAACATCCGGGCCT GGCGGGC TGCCC GCCCTCC TTTTTGCATCACATT TERM 1570 1122317 - 1122336 + H 75 -10.8 -2.87211 | opp_overlap 1122317 1122321, overlap 1122321 GACTGACAGACATAA CAAATCCC CGGG GGGATTTG TGTATAAGAGACAGT TERM 1571 1122336 - 1122317 - H 83 -10.8 -3.64912 | opp_overlap 1122317 1122321, overlap 1122321 GACTGACAGACATAA CAAATCCC CGGG GGGATTTG TGTATAAGAGACAGT TERM 1572 1122332 - 1122321 - H 72 -5.8 -4.4458 | opp_overlap 1122317 1122321, overlap 1122317 GACAGACATAACAAA TCCC CGGG GGGA TTTGTGTATAAGAGA TERM 1573 1122506 - 1122492 - H 78 -5.8 -4.99043 | GTTGCACAAATAAAA TGTTAT GAT ATAACA TAACAATCACAACAT UTI89_C1129 1122532 - 1124502 + | outer membrane heme/hemoglobin receptor UTI89_C1130 1124521 - 1125312 + | hypothetical protein TERM 1574 1125322 - 1125347 + F 72 -10.5 -2.87132 | gap 1, opp_overlap 1125321 1125313 AATTAATGATACTAT TCCTGCCCTGTA TTT TAC-GGGCAGGG TATATCAACCGGAAA TERM 1575 1125665 - 1125644 - g 75 -5.1 -4.72986 | CACTCTTATGAAAAA CCTGCTCAC ACAG GCAAACAGG AATCACTTAGCTGTA UTI89_C1131 1125513 - 1126775 + | hypothetical protein UTI89_C1132 1127064 - 1126882 - | hypothetical protein TERM 1576 1127554 - 1127570 + H 70 -6.6 -4.0371 | GGAAAGACAGTGGTA TGCAAC CGGGC GTTGCA TTTGTCTCAAGCATA TERM 1577 1127675 - 1127652 - H 71 -10.4 -2.81088 | gap 1, opp_overlap 1127648, overlap 1127648 1127651 AAGGTAGTTAACAAT CTTCCAGACTG GGA CAGTCTGGA-G TAAAGATCTTTGTAG TERM 1578 1127963 - 1127938 - g 77 -6.1 -4.7254 | gap 1, overlap 1127940 ATTTGGTATGAAAAA GC-CGCTGACCA AAA TGATCCGCGTGC GCAGGCCAAACTCGG UTI89_C1133 1127725 - 1128861 + | hypothetical protein UTI89_C1134 1129989 - 1129663 - | hypothetical protein UTI89_C1135 1130736 - 1130377 - | hypothetical protein UTI89_C1136 1131274 - 1130945 - | hypothetical protein UTI89_C1137 1131593 - 1131288 - | hypothetical protein TERM 1579 1132353 - 1132378 + H 76 -3.9 -5.06052 | gap 1 TTATCTCCGTGAATC CCCCGC-CTC CTTTCCT GTGTGCGGGG TTTTGTCTTTTTTCA UTI89_C1138 1132408 - 1133280 + | hypothetical protein TERM 1580 1133423 - 1133399 - f 91 -8.7 -4.91285 | opp_overlap 1133402 1133417 1133418, overlap 1133413 1133414 ATTAATAGAATAAAA CGATCGATA AAACAGG TATCGATCG TTACCATCGATCGTT TERM 1581 1133418 - 1133436 + F 72 -7.4 -4.02424 | opp_overlap 1133399 1133413 1133414, overlap 1133402 1133417 CGATAAAACAGGTAT CGATCGTT ACC ATCGATCG TTTATAGTGGTTAAT TERM 1582 1133594 - 1133621 + F 100 -17.8 -5.45652 | TGCTGTTTTGTACCT GCCGGTATCCAC ATTT GTGGGTACCGGC TTTTTTATTCACCCT TERM 1583 1133983 - 1133970 - g 82 -8.1 -4.57474 | GCAATGGATACAAAA TGGCG GTAT CGCCA ACAACACTACTGTCA TERM 1584 1134802 - 1134782 - g 74 -10.5 -3.17075 | CCGGTGGTAAGGCAA CAGATGTCA CCA TGACATCCG GTGGTGCCCTGATTG UTI89_C1139 1133653 - 1136499 + | putative autotransporter TERM 1585 1136521 - 1136545 + TF 100 -21.5 -4.54727 | GGTCACTCCCCTTCA GGCCCCGGTCA TTA TGACCGGGGCC TTTTACTTTCAGGGA TERM 1586 1136754 - 1136779 + TF 100 -13.3 -5.09521 | CATTTCATTTGTCAG GCCGCGTCTTC TCCG GGAGACGTGGC TTTTTCATTTATTAC TERM 1587 1136833 - 1136846 + GT 77 -6.7 -4.51174 | AAGGAGCAAATTATG CGACT AGCC AGTCG TTTTGGTTATGCTGC UTI89_C1141 1137693 - 1136836 - | hypothetical protein TERM 1588 1137092 - 1137076 - Gg 72 -4.3 -4.60797 | CGGGGATACACAAAA CACATGC TGC GCCTGCG CCGTAACGGAGAGAT yafZ1 1136830 - 1137651 + | hypothetical protein TERM 1589 1137695 - 1137724 + GrH 100 -16.5 -3.34455 | gap 1, opp_overlap 1137693 1137690, overlap 1137690 GGCACCAGAATCACC CGACGCCCCGG-AG GCG CTGCCGGGGTGTCG TTCCATTTCTGATGA TERM 1590 1137804 - 1137787 - gRH 75 -8.5 -3.85817 | ACCGTCCCGGAGAAA TCAGTCT GTGC AGACTGA GTACAGGCAATGGCA UTI89_C1142 1137672 - 1137896 + | hypothetical protein UTI89_C1144 1138943 - 1137984 - | hypothetical protein yafX1 1137918 - 1138463 + | hypothetical protein yeeS3 1138479 - 1138955 + | putative radC-like protein YeeS yeeT3 1139018 - 1139239 + | hypothetical protein UTI89_C1147 1139258 - 1139902 + | hypothetical protein TERM 1591 1140205 - 1140168 - gf 76 -8.5 -4.00042 | gap 1 CTGCTGATGAAACAA CTGGAACTCATGCTCACC AGC GGTGAAC-TGAATCCCCG CCATCAGCATACCGT UTI89_C1148 1139862 - 1140329 + | intergenic-region protein TERM 1592 1140598 - 1140583 - g 70 -4.7 -4.56597 | overlap 1140585 TTTCTCGTGGAAAAA TACGC GCTGGT GCGTA CCGACCAGCCGGGAT UTI89_C1149 1140376 - 1140750 + | hypothetical protein UTI89_C1150 1140750 - 1141238 + | hypothetical protein UTI89_C1151 1141250 - 1141447 + | hypothetical protein TERM 1593 1141485 - 1141507 + F 90 -9.1 -4.61873 | opp_overlap 1141485 ACTTCATTCCAATGA CGTCAGCCT GAACA GGGCTGGCG TTTTCGTTTATAAAC UTI89_C1152 1141540 - 1142382 + | hypothetical protein TERM 1594 1142499 - 1142523 + F 100 -13 -3.4678 | opp_overlap 1142499 AGGATAAATAAAAAA GCGCATGTTA AACAA TAACATGCGC TTGTAATCTGGCGGT TERM 1595 1142523 - 1142499 - f 100 -13 -5.73978 | opp_overlap 1142499 AGGATAAATAAAAAA GCGCATGTTA AACAA TAACATGCGC TTGTAATCTGGCGGT TERM 1596 1142743 - 1142753 + F 81 -3.2 -5.40072 | overlap 1142704 ATGCAGTTTTAATAA GCGA AAT TTGC TTTTTTTGCCACCGA ycdW 1142814 - 1143791 + | putative dehydrogenase ycdX 1143846 - 1144583 + | putative hydrolase ycdY 1144607 - 1145161 + | hypothetical protein TERM 1597 1145700 - 1145682 - g 71 -2.2 -4.88407 | overlap 1145684 TTACGCAATGAAAAA CAGCGGCC TGT GGCTGGCG GCGCGTAGTACGAAG ycdZ 1145215 - 1145754 + | hypothetical protein TERM 1598 1145771 - 1145745 - T 93 -9.5 -5.01811 | opp_overlap 1145749, overlap 1145749 GCAGCAAATCAAAAA TAAAGCGTGAG GGGCA CTCACGCTTTC GCTTAAACAGTAAAA TERM 1599 1145749 - 1145767 + T 80 -10.3 -3.75332 | opp_overlap 1145745 1145749 CAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1600 1145767 - 1145749 - T 93 -10.3 -5.00388 | opp_overlap 1145749, overlap 1145745 CAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1601 1145787 - 1145808 + T 91 -8.7 -5.03994 | opp_overlap 1145782 1145787 GCTTAAACAGTAAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTATCAGG TERM 1602 1145808 - 1145787 - T 87 -8.7 -4.49756 | opp_overlap 1145787, overlap 1145782 GCTTAAACAGTAAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTATCAGG csgG 1146652 - 1145819 - | curli production assembly/transport component CsgG precursor TERM 1603 1146289 - 1146302 + g 75 -4.5 -4.77165 | opp_overlap 1146289, overlap 1146290 GGATTCGGTTATTAA TGGCA ACCG TGCCG TTTTCTTGTGCCGCA TERM 1604 1146545 - 1146502 - G 85 -11.8 -3.70902 | opp_overlap 1146506, overlap 1146506 TGTTGTATACCGAAA CAAAGATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATCTTTG TAGCTCTGAGCACGA TERM 1605 1146541 - 1146506 - G 77 -6.8 -4.48299 | opp_overlap 1146506, overlap 1146502 GTATACCGAAACAAA GATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATC TTTGTAGCTCTGAGC csgF 1147095 - 1146679 - | curli assembly protein CsgF csgE 1147509 - 1147120 - | curli assembly protein CsgE csgD 1148164 - 1147514 - | DNA-binding transcriptional regulator CsgD TERM 1606 1147907 - 1147928 + gH 93 -8.9 -4.77036 | opp_overlap 1147910 TTCAGGCGTATTTAG CAACAATAT TTTG ATATTGTTG TTTTTCCTGCTCAAA UTI89_C1162 1148138 - 1148278 + | hypothetical protein TERM 1607 1148712 - 1148700 - TR 79 -4.9 -5.11836 | AGATTTAAAAGAAAA CAAAA TAT TTTTG CGTAGATAACAGCGT UTI89_C1163 1148823 - 1148689 - | hypothetical protein csgB 1148890 - 1149372 + | curlin minor subunit csgA 1149413 - 1149868 + | cryptic curlin major subunit TERM 1608 1149906 - 1149891 - f 89 -10.4 -4.49556 | opp_overlap 1149891 TCTGTATTAAAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA TERM 1609 1149891 - 1149906 + F 100 -10.4 -5.75342 | opp_overlap 1149891 TCTGTATTAAAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA csgC 1149927 - 1150259 + | putative autoagglutination protein UTI89_C1167 1150380 - 1150691 + | hypothetical protein ymdB 1150786 - 1151319 + | hypothetical protein TERM 1610 1151369 - 1151381 + GT 78 -5.5 -4.8048 | TGTTCGCAACATCCC GGTCA GTG TGGCC TTTTTCCTCTGGAGA TERM 1611 1152661 - 1152650 - gT 70 -4.4 -4.46112 | CGTCATGCAAAGAAA GAGA TTGT TCTC AAAAAAGAACCCGCC TERM 1612 1152698 - 1152668 - gT 100 -11.8 -5.00884 | opp_overlap 1152671, overlap 1152671 ATTGTTCTCAAAAAA GAACCCGCCACCAG TTT CTGGAAGCGGGTTA TGGTCAGACTGGCGT TERM 1613 1152671 - 1152695 + GT 83 -11.3 -3.41051 | opp_overlap 1152668 1152671 GTTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG TERM 1614 1152695 - 1152671 - gT 100 -13.5 -4.61482 | opp_overlap 1152671, overlap 1152668 GTTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG ymdC 1151261 - 1152742 + | putative synthase mdoC 1153907 - 1152750 - | glucans biosynthesis protein TERM 1615 1153387 - 1153364 - G 100 -3.2 -5.64274 | gap 1, overlap 1153367 1153368 CGAGGCACAAAAAAA TCACCGATAGT TTT ACCATCGA-GA ATTTTTTATTCGTTT UTI89_C1171 1154095 - 1153952 - | hypothetical protein TERM 1616 1154610 - 1154593 - gH 70 -9.9 -2.88088 | overlap 1154592 TCAAAATAAATGAAG TGACTGC CACC GCAGTCA AACGAATCAAATACA TERM 1617 1154745 - 1154735 - gH 88 -5.4 -5.22289 | CAGCAAAGATAAAAA CGAT GAA ATCG TCAGCATGCTCGGGG mdoG 1154283 - 1155836 + | glucan biosynthesis protein G mdoH 1155799 - 1158372 + | glucosyltransferase MdoH TERM 1618 1158527 - 1158497 - gf 81 -11.3 -3.18094 | opp_overlap 1158503, overlap 1158503 AAAACAACGAGCCAA TAAAAATACCGGC GTTAT GCCGGTATTTTTT ACGGAAGAGGTATCA TERM 1619 1158521 - 1158503 - gf 100 -10.3 -5.11063 | opp_overlap 1158503, overlap 1158497 ACGAGCCAATAAAAA TACCGGC GTTAT GCCGGTA TTTTTTACGGAAGAG TERM 1620 1158503 - 1158521 + GF 100 -11 -5.00616 | opp_overlap 1158503 1158497 ACGAGCCAATAAAAA TACCGGCG TTA TGCCGGTA TTTTTTACGGAAGAG UTI89_C1174 1158381 - 1158596 + | hypothetical protein yceK 1158544 - 1158771 + | hypothetical protein msyB 1159149 - 1158772 - | hypothetical protein yceE 1160455 - 1159229 - | drug efflux system protein MdtG htrB 1161610 - 1160627 - | lipid A biosynthesis lauroyl acyltransferase TERM 1621 1161015 - 1161025 + g 70 -5.4 -4.41348 | TTTAAATCTTTGCGG TCGA GCA TCGA TTTATTTGAGCGCAA TERM 1622 1161366 - 1161388 + g 72 -8.4 -3.73224 | CACAGTTCCAGGTTG CGATGCACAA TTT TTGCGCGTCG TTTCATAAAACGTAA TERM 1623 1161827 - 1161814 - g 70 -6.7 -4.10429 | overlap 1161822 AACGACGCGTTAAAA GCCAA AATG TTGGC TGAGAGCGAACCGCG TERM 1624 1162475 - 1162499 + G 70 -4.1 -4.63218 | opp_overlap 1162464 AATACGCCCGTAAGG CGCGCGAGCAG GGC TTGCCGGTGCG TTTTATTGGCAAAAA TERM 1625 1162631 - 1162617 - g 70 -4.2 -4.67904 | opp_overlap 1162618, overlap 1162618 TACCAACTGTAAAAA TGATGG CTG CCATCT GTTGTTTATTCAGTG yceA 1161718 - 1162824 + | hypothetical protein TERM 1626 1162860 - 1162826 - T 72 -5.7 -4.46675 | opp_overlap 1162829 1162830, overlap 1162828 1162831 ATCCAACAGAATAAA TATCATTGCCGGATG CGTGC CATCCGGCAACATTT CACTCTTACTTCTGC TERM 1627 1162858 - 1162828 - T 75 -8.3 -3.83144 | opp_overlap 1162829 1162830, overlap 1162826 1162831 CCAACAGAATAAATA TCATTGCCGGATG CGTGC CATCCGGCAACAT TTCACTCTTACTTCT TERM 1628 1162830 - 1162856 + T 75 -10.9 -2.86618 | opp_overlap 1162828 1162826 1162831, overlap 1162829 AACAGAATAAATATC ATTGCCGGATG CGTGC CATCCGGCAAC ATTTCACTCTTACTT TERM 1629 1162855 - 1162831 - T 89 -14.4 -2.9735 | opp_overlap 1162830 1162829, overlap 1162828 1162826 ACAGAATAAATATCA TTGCCGGATG CGTGC CATCCGGCAA CATTTCACTCTTACT yceI 1163441 - 1162866 - | hypothetical protein UTI89_C1181 1164023 - 1163445 - | cytochrome b561-like protein 2 TERM 1630 1163592 - 1163578 - GH 75 -5.6 -4.66609 | overlap 1163579 CACGCGAGCCAAAAA TGCAGG GCA CCGGCA AAGTCAGCCTGTGCG UTI89_C1182 1164001 - 1164147 + | hypothetical protein yceO 1164412 - 1164272 - | hypothetical protein TERM 1631 1164344 - 1164334 - G 75 -5.4 -4.62163 | AGAGAAAAAGATAAA GCAT CAG ATGC TCGCGAATATTATTG TERM 1632 1164423 - 1164404 - G 95 -10.7 -4.57837 | opp_overlap 1164409 ATACTCCTGTAAAAA CGGCCTC ATTCTG GAGGCCG TAATGATGATTATTG solA 1165551 - 1164433 - | N-methyltryptophan oxidase TERM 1633 1165536 - 1165550 + g 100 -3.6 -5.76633 | CGCTGCCAATAATGA TGAGAT CGT ATTTCA TTTTTTTCTCTCTGC TERM 1634 1165641 - 1165625 - R 79 -9.4 -3.74347 | opp_overlap 1165625, overlap 1165619 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT TERM 1635 1165625 - 1165641 + r 84 -9.4 -4.20084 | opp_overlap 1165619 1165625 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT bssS 1165920 - 1165666 - | biofilm formation regulatory protein BssS TERM 1636 1165895 - 1165906 + g 71 -3 -4.8236 | ACGAGCGGATGAGTC TGAA TGAC TTCA TTATTTTTTTCCATC TERM 1637 1166188 - 1166173 - R 100 -11.8 -5.85244 | AAGTAAAATAAAAAA GCCGGG GCGA CCCGGC AAAAACAAAAATCAC UTI89_C1186 1166512 - 1166210 - | DNA damage-inducible protein I pyrC 1167575 - 1166529 - | dihydroorotase TERM 1638 1167674 - 1167659 - R 100 -11.8 -4.91852 | opp_overlap 1167656 TGCACGAAAAATAAA GGGCGC GAAT GCGCCC TCGTGATTAATCAGT yceB 1168298 - 1167681 - | hypothetical protein TERM 1639 1168372 - 1168326 - R 80 -4.3 -5.31275 | gap 1, overlap 1168333 1168335 CGCCAGCAGAAAAAA CTGA-AAACGGCGGCAACCCGC GAAT ACAGGCTGCCGCGGCGGGTCAG GATTAAATCGCCATT TERM 1640 1168364 - 1168333 - R 100 -12.2 -4.55016 | overlap 1168326 1168335 AGAAAAAACTGAAAA CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG CGGGTCAGGATTAAA TERM 1641 1168362 - 1168335 - R 84 -13.4 -2.56715 | overlap 1168333 1168326 AAAAAACTGAAAACG GCGGCAACCCGC GAAT ACAGGCTGCCGC GGCGGGTCAGGATTA grxB 1169022 - 1168375 - | glutaredoxin 2 TERM 1642 1169111 - 1169121 + r 72 -8.2 -3.92373 | opp_overlap 1169108 1169111, overlap 1169090 CGTTCAAGCAAACGA CGCG CGG CGCG TTTCTGGCTAAACTG yceL 1170294 - 1169086 - | multidrug resistance protein MdtH TERM 1643 1169797 - 1169781 - G 91 -7.9 -5.03227 | ACAGCACAAACAAAA CTGCCCC TGT GGCGCAG ACCAGGCGAAAGTCG TERM 1644 1169910 - 1169891 - G 87 -4.9 -5.30686 | opp_overlap 1169890 AACAGCGAGAAAAAA CGACCAC GCTGCT GTGGACG GATTAATTTCACCAC TERM 1645 1170795 - 1170807 + G 84 -7.7 -4.67556 | opp_overlap 1170795 ACGAAAAAGAGATTA TTGGC GTT GCCAA TTTTTCCAATGTTGT rimJ 1170530 - 1171114 + | ribosomal-protein-S5-alanine N-acetyltransferase yceH 1171125 - 1171772 + | hypothetical protein mviM 1171774 - 1172697 + | putative virulence factor TERM 1646 1172760 - 1172776 + F 100 -13.7 -4.11692 | ATTCGCCTCTTTCAG CGCCTGC CTT GCAGGCG TTTTGCCCGTGGGTC mviN 1172807 - 1174342 + | putative virulence factor TERM 1647 1174378 - 1174346 - T 83 -10.8 -3.62597 | opp_overlap 1174347 1174349, overlap 1174347 1174350 CGGACGGTGTAACAA TGTAT-TCCGGCCTGC AGT GCAGGCCGGAGATA-A TCTTCAGATCGAAAT TERM 1648 1174347 - 1174378 + T 83 -12.4 -3.05963 | gap 1, opp_overlap 1174346 1174347 1174350, overlap 1174349 GGACGGTGTAACAAT GTAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TCTTCAGATCGAAAT TERM 1649 1174378 - 1174347 - T 82 -12.4 -2.77344 | gap 1, opp_overlap 1174347 1174349, overlap 1174346 1174350 GGACGGTGTAACAAT GTAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TCTTCAGATCGAAAT TERM 1650 1174349 - 1174375 + T 87 -14.4 -2.75074 | opp_overlap 1174346 1174347 1174350, overlap 1174347 ACGGTGTAACAATGT ATTCCGGCCTGC AGT GCAGGCCGGAGA TAATCTTCAGATCGA TERM 1651 1174374 - 1174350 - T 93 -15.7 -2.6563 | opp_overlap 1174349 1174347, overlap 1174346 1174347 CGGTGTAACAATGTA TTCCGGCCTGC AGT GCAGGCCGGAG ATAATCTTCAGATCG flgN 1174798 - 1174382 - | flagella synthesis protein FlgN flgM 1175096 - 1174803 - | anti-sigma28 factor FlgM TERM 1652 1174840 - 1174867 + g 73 -4 -4.86621 | overlap 1174841 1174844 TGCGCTTCGTTGATC AGCGCATCGGCA ATTT TGCCGGTGTCCA TTTTTAGTTCACCGT flgA 1175831 - 1175172 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 1653 1176045 - 1176027 - g 72 -10.2 -3.38991 | overlap 1176025 ACGTTTTCAACAAGA GGCGCTCA ATC TGCGCGCC CAGCGTCAGGAAGTG flgB 1175986 - 1176402 + | flagellar basal body rod protein FlgB TERM 1654 1176432 - 1176444 + G 72 -10.5 -3.05816 | GAATATTTTTGATAT CGCCG GGT CGGCG TTAACTGCCCAGTCC flgC 1176406 - 1176810 + | flagellar basal body rod protein FlgC TERM 1655 1177240 - 1177224 - g 77 -8.7 -4.0371 | overlap 1177211 CAGGCGGCAGACAAA GTGACGG CCA CCATCAC CGATAAAAACGGCGC TERM 1656 1177264 - 1177250 - g 76 -3.5 -4.88736 | gap 1, opp_overlap 1177251, overlap 1177251 CATCACCGATAAAAA CGG-CG CGGT CGTCCG TACCATTGATATCGG flgD 1176822 - 1177517 + | flagellar basal body rod modification protein TERM 1657 1178473 - 1178461 - g 70 -5.5 -4.32951 | opp_overlap 1178465 1178466, overlap 1178466 ATTCCAACGAACAAA CCCAA CTG CTGGG GCAGATTGTACTGGC flgE 1177542 - 1178747 + | flagellar hook protein FlgE TERM 1658 1178835 - 1178823 - g 74 -10.5 -3.24329 | opp_overlap 1178821, overlap 1178821 GACGCTGAATCAACA GGCGG TAA CCGCC AGTAATCTGGCCAAT flgF 1178767 - 1179522 + | flagellar basal body rod protein FlgF flgG 1179694 - 1180476 + | flagellar basal body rod protein FlgG TERM 1659 1180484 - 1180502 + F 72 -8.1 -3.96337 | AACTCTAAGGCTTAA CCGGTGG CAGGT TCACCGG TTTACTGATTTTTGA flgH 1180514 - 1181227 + | flagellar basal body L-ring protein flgI 1181236 - 1182336 + | flagellar basal body P-ring protein flgJ 1182336 - 1183277 + | peptidoglycan hydrolase TERM 1660 1184651 - 1184640 - g 72 -5.8 -4.30014 | overlap 1184633 CTGACGAAGCGAAAA TCGC CATG GCGA GCGAAGAAGATGCGG flgK 1183343 - 1184986 + | flagellar hook-associated protein FlgK TERM 1661 1185679 - 1185668 - g 77 -7.2 -4.56969 | overlap 1185655 1185669 1185670 AAGCGGATAAAGAAA CCGC CGCT GCGG CACTGGATAAAACCA flgL 1184998 - 1185951 + | flagellar hook-associated protein FlgL TERM 1662 1185993 - 1186021 + T 100 -16 -5.54264 | overlap 1186018 TGGGTATGTTTTGTC TGCCCGCTCTGG GATCG CCGGGGCGGGCA TTTTTTTGCCTATTT TERM 1663 1186106 - 1186125 + T 81 -10.7 -3.45634 | opp_overlap 1186106 AGATGAAATAAAAAA GCCCTGG CAGTTA CCAGGGC TTGATTGCTTGAGCT TERM 1664 1186125 - 1186106 - T 100 -11.4 -5.69793 | opp_overlap 1186106 AGATGAAATAAAAAA GCCCTGGC AGTT ACCAGGGC TTGATTGCTTGAGCT rne 1189331 - 1186146 - | ribonuclease E TERM 1665 1187054 - 1187089 + g 78 -8.3 -4.15044 | gap 1, overlap 1187043 GTTCTGTGCGTGGAG CTGGCGCTTCCTGAAC AATTG GTTC-GGCAGCGACAG TTTCTTCAACCACCG TERM 1666 1187309 - 1187336 + g 71 -3.3 -4.75174 | overlap 1187306 1187302 TACGTTCACGACGCG GCGCTTGCTGC TCGTCT GTGGTACGCGC TTTTTCCGTTACCTC TERM 1667 1188729 - 1188743 + g 88 -5.6 -5.18357 | CAGGAACGGAGCCGG GCGGCT TTC AGCGGC TTTTTTGATGGCTTC UTI89_C1210 1189412 - 1189786 + | hypothetical protein yceC 1189904 - 1190863 + | 23S rRNA pseudouridylate synthase C TERM 1668 1190934 - 1190887 - T 79 -11.8 -2.64194 | opp_overlap 1190895 1190896, overlap 1190886 1190906 TATAAACCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCAGCAC CGATTGCCGGATGCG yceF 1191598 - 1190975 - | Maf-like protein TERM 1669 1191690 - 1191718 + H 80 -10.3 -3.74077 | opp_overlap 1191696, overlap 1191696 GTGTGCGAATTATTG GCAAAAGGCAACC ACA GGCTGCCTTTTTC TTTGACTCTATGACG TERM 1670 1191696 - 1191712 + H 91 -7.9 -5.31519 | opp_overlap 1191696, overlap 1191690 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT TERM 1671 1191712 - 1191696 - H 82 -10.1 -4.12902 | opp_overlap 1191696 1191690 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT yceD 1191758 - 1192279 + | hypothetical protein rpmF 1192331 - 1192504 + | 50S ribosomal protein L32 TERM 1672 1192520 - 1192505 - f 71 -9 -3.34895 | opp_overlap 1192491 GTCATCGCTAAGTAA TCACGC GTCT GCGTGA TGAAGCTTAGTGAGG TERM 1673 1192641 - 1192670 + G 78 -10.7 -3.51032 | overlap 1192642 1192645 TTTTGGCCCTTCCGT GACAGTGCCTGCA GCAT TGCAGGCACTGAA TTCTAATTCGCAACT TERM 1674 1192642 - 1192669 + G 85 -14.2 -2.70298 | overlap 1192641 1192645 TTTGGCCCTTCCGTG ACAGTGCCTGCA GCAT TGCAGGCACTGA ATTCTAATTCGCAAC TERM 1675 1192645 - 1192666 + G 90 -14.5 -2.63347 | overlap 1192642 1192641 GGCCCTTCCGTGACA GTGCCTGCA GCAT TGCAGGCAC TGAATTCTAATTCGC plsX 1192585 - 1193655 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1676 1193844 - 1193796 - g 79 -3.9 -5.03314 | gap 1, opp_overlap 1193805, overlap 1193798 CCGATTTGGAAAAAA TGGTGGATACCTCTGACGAGTG GATTGT CACTCGT-ACCGGTATCCGCGA ACGCCACATTGCCGC fabH 1193723 - 1194676 + | 3-oxoacyl-(acyl carrier protein) synthase III fabD 1194692 - 1195621 + | malonyl CoA-acyl carrier protein transacylase TERM 1677 1195673 - 1195653 - g 90 -7.5 -4.86621 | overlap 1195655 ATTTTGAAGGAAAAA TCGCACTGG TAA CCGGTGCAA GCCGCGGAATTGGCC fabG 1195634 - 1196368 + | 3-ketoacyl-(acyl-carrier-protein) reductase UTI89_C1219 1196899 - 1196525 - | hypothetical protein acpP 1196579 - 1196815 + | acyl carrier protein TERM 1678 1196851 - 1196823 - Gf 72 -9.6 -3.15056 | gap 1, opp_overlap 1196824 1196827, overlap 1196821 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTGTCCC TERM 1679 1196824 - 1196850 + gF 100 -13.1 -4.94487 | gap 1, opp_overlap 1196823 1196821, overlap 1196827 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTGTCC TERM 1680 1196827 - 1196848 + gF 100 -15.9 -2.71413 | opp_overlap 1196823 1196821, overlap 1196824 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTGT TERM 1681 1197275 - 1197255 - g 70 -3.9 -4.68384 | overlap 1197260 ACTGATCGAAGAAAA CCACACATC TCT GATGAACGG TGGTCCACGTAAGAT TERM 1682 1197571 - 1197546 - g 74 -10.3 -3.51329 | TACCCGCAATGATAA CCCGCAAGCGG CGAG CCGCCCGTGGG ATAAAGAGCGTGATG fabF 1196902 - 1198143 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1683 1198169 - 1198184 + F 100 -8.2 -5.52096 | opp_overlap 1198169 TCCACCCTTATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT TERM 1684 1198184 - 1198169 - f 73 -6 -4.38712 | opp_overlap 1198169 TCCACCCTTATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT pabC 1198263 - 1199072 + | 4-amino-4-deoxychorismate lyase yceG 1199075 - 1200097 + | hypothetical protein TERM 1685 1200546 - 1200531 - g 91 -11.8 -4.07885 | GAGGTTGGCTTAAAA CGCGCG CGTG CGCGCG GCGAGCTGGATCGTA tdk 1200087 - 1200728 + | thymidylate kinase TERM 1686 1200774 - 1200764 - gf 81 -6.8 -4.59773 | CCTGATTTCGAAAAA CTGG TAG CCAG CTATCAGGCCGGAAG TERM 1687 1201306 - 1201333 + GF 93 -12 -3.90922 | gap 1 CGCATTGCGCTTAAG CGCCGGT-TCGCC TGG GGCGGCACTGGCG TTGTTTCAGGGAGAT TERM 1688 1201508 - 1201496 - gf 81 -9.1 -4.09864 | ATGGATGCGCTAAAA CGCCA TCA TGGCG CTGCGCAGGTGACCA holB 1200725 - 1201729 + | DNA polymerase III subunit delta' TERM 1689 1201910 - 1201920 + GF 70 -6.8 -4.00512 | TCTGGTAGGCGAACG CGAC AAC GTCG TATTTTCTTGTGGCG ycfH 1201680 - 1202537 + | putative metallodependent hydrolase TERM 1690 1202609 - 1202582 - f 79 -9.2 -3.93057 | gap 1, overlap 1202583 GCTAAAACGAGTAAA GTTCACCG-CCGA AAA TCGGGCGGTGAAT AACCACGTTTGAAAT TERM 1691 1202608 - 1202583 - f 82 -12.7 -2.95111 | gap 1, overlap 1202582 CTAAAACGAGTAAAG TTCACCG-CCGA AAA TCGGGCGGTGAA TAACCACGTTTGAAA TERM 1692 1203676 - 1203659 - g 70 -4 -4.61566 | opp_overlap 1203659 1203657 TGCTAAACCAGAAAA CCGCGC GAAAGT GGGCGG TATTATGATCTCCGC UTI89_C1228 1202832 - 1204265 + | glucose-specific PTS system IIBC components TERM 1693 1204290 - 1204307 + T 100 -12.7 -5.04987 | opp_overlap 1204290 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT TERM 1694 1204307 - 1204290 - T 86 -12.7 -3.25823 | opp_overlap 1204290 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT fhuE 1206514 - 1204325 - | ferric-rhodotorulic acid outer membrane transporter TERM 1695 1205020 - 1205045 + g 79 -4.7 -4.88736 | gap 1, opp_overlap 1205018 1205020 CATTGATGTCAAACA CCAGACCAGCGT AAG GCG-TGGTGTGG TTTTTCTCCATGCTG UTI89_C1230 1206717 - 1206547 - | hypothetical protein TERM 1696 1207072 - 1207062 - g 75 -5.4 -4.59773 | CCGTAGCGGCAAAAA TTGC TGA GCAA GAAGGTATTGCCGAA ycfF 1206848 - 1207207 + | purine nucleoside phosphoramidase ycfL 1207210 - 1207587 + | hypothetical protein UTI89_C1233 1207598 - 1208242 + | fibronectin-binding protein B TERM 1697 1208252 - 1208273 + G 91 -9.4 -4.58685 | CAATAATCCCCTCAC GCGCGACG AATTGC TGTCGCGC TTTTTCCCGCAGTTT thiK 1208223 - 1209047 + | thiamine kinase TERM 1698 1209952 - 1209962 + GF 70 -6.8 -4.08706 | opp_overlap 1209952 CCGATCAAGGCAGAA CGTG TTA CACG TTTGTATCATAAAGG ycfO 1209058 - 1210083 + | beta-hexosaminidase ycfP 1210049 - 1210648 + | hypothetical protein ndh 1211020 - 1212351 + | NADH dehydrogenase TERM 1699 1212418 - 1212450 + F 79 -12 -2.60723 | opp_overlap 1212427, overlap 1212417 TGGTACGAGCGGTAG GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC ATTCCTTCAGACTCC ycfJ 1212539 - 1213117 + | hypothetical protein TERM 1700 1213140 - 1213166 + T 91 -6.6 -5.41143 | opp_overlap 1213140 GTACTCTGCAATTTA GCCCCTCA TTCGCTCAAGC TGAGGGGC TTTTTTTGCGACCTA ycfQ 1213889 - 1213179 - | YcfQ gene product TERM 1701 1213767 - 1213777 + g 100 -2.4 -5.77853 | GTCGAACACTTTTGG GCGG CCA CGGC TTTTTTTTACACATT TERM 1702 1214082 - 1214069 - g 79 -2.3 -5.30575 | opp_overlap 1214074 GAAAAACGTAAAAAA CCTCA TCGC TGCGG CGATTTTAAGCTCCA TERM 1703 1214074 - 1214085 + G 70 -5.8 -4.15006 | opp_overlap 1214069 ACGTAAAAAACCTCA TCGC TGCG GCGA TTTTAAGCTCCATGT ycfR 1214052 - 1214309 + | hypothetical protein TERM 1704 1214348 - 1214374 + T 100 -18.8 -5.60993 | CTACTGCTGATTTTT TCCCCGCGACAT GCC GTGTCGCGGGGA TTTTTTTATCCGAGC ycfS 1215353 - 1214391 - | hypothetical protein mfd 1219007 - 1215498 - | transcription-repair coupling factor TERM 1705 1216460 - 1216472 + g 70 -6.9 -4.01564 | GTACCAGTTCTGCCA GCCGT TCG GCGGC TTTCTGGATGTTTTC TERM 1706 1217715 - 1217725 + g 70 -5.4 -4.4078 | opp_overlap 1217702 AAGACGCATAATGCG TTGC GGA GCAA TTTTAATTCGCGCGA TERM 1707 1217825 - 1217840 + g 82 -3.2 -5.20333 | opp_overlap 1217821, overlap 1217821 CGAGGAACTTACGCA GCGC ATCCAGCG GCGC TTTTTGTTGTGCCTG TERM 1708 1219050 - 1219067 + r 81 -12.7 -2.52543 | opp_overlap 1219050 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGCTTAGCGGGAGT TERM 1709 1219067 - 1219050 - R 90 -12.7 -3.30701 | opp_overlap 1219050 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGCTTAGCGGGAGT ycfT 1220145 - 1219072 - | hypothetical protein TERM 1710 1219490 - 1219475 - G 78 -9 -4.0031 | opp_overlap 1219489 ACGGCCAGCAAAGAA GCCATC AGCA GATGGC GGCGCAACGGTACCG TERM 1711 1221137 - 1221124 - g 90 -8.1 -4.77157 | overlap 1221117 TTAAGTCAGCAAAAA CTGCC TGAA GGCAG CAAATGGCAGGACTG TERM 1712 1221231 - 1221243 + G 84 -10.5 -3.72051 | GCTGAGCCTGATTGT CGCCG TTG CGGCG TTTAACATTATTACC ycfU 1220407 - 1221606 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1221599 - 1222300 + | lipoprotein transporter ATP-binding subunit lolE 1222300 - 1223544 + | outer membrane-specific lipoprotein transporter subunit LolE ycfX 1223573 - 1224484 + | N-acetyl-D-glucosamine kinase TERM 1713 1224564 - 1224548 - g 75 -4.4 -4.85782 | gap 1, opp_overlap 1224548 1224551 1224554, overlap 1224550 TTTCGTAAAAATAAA CG-TCGC CTGC GCGAGCG TTTGCGTCAGCGTAT TERM 1714 1224567 - 1224578 + G 82 -2.2 -5.41143 | overlap 1224554 1224551 GCCTGCGCGAGCGTT TGCG TCAG CGTA TTTTTTTCAGAGATA cobB 1224500 - 1225321 + | NAD-dependent deacetylase ycfZ 1226247 - 1225459 - | hypothetical protein TERM 1715 1226083 - 1226071 - G 70 -4.7 -4.4522 | opp_overlap 1226071 TAAAACCACAATAAA CGGTG CAA CTCCG GTTTGTTGGCGAAAA ymfA 1226747 - 1226244 - | hypothetical protein TERM 1716 1226753 - 1226732 - G 100 -10.1 -5.63517 | opp_overlap 1226732 1226731, overlap 1226733 TTGCTAAATAAAAAA CGGGCGGTA ATAC CACCGCCCA CTTGCTGAATTAACG TERM 1717 1226752 - 1226733 - G 90 -11.4 -3.97026 | opp_overlap 1226732 1226731, overlap 1226732 TGCTAAATAAAAAAC GGGCGGTA ATAC CACCGCCC ACTTGCTGAATTAAC potD 1227809 - 1226763 - | spermidine/putrescine ABC transporter periplasmic substrate-binding protein potC 1228600 - 1227806 - | spermidine/putrescine ABC transporter membrane protein potB 1229454 - 1228597 - | spermidine/putrescine ABC transporter membrane protein potA 1230574 - 1229438 - | putrescine/spermidine ABC transporter ATPase protein UTI89_C1255 1230804 - 1230553 - | hypothetical protein pepT 1230824 - 1232050 + | peptidase T TERM 1718 1232084 - 1232058 - T 100 -15.2 -4.32201 | opp_overlap 1232058, overlap 1232059 GGAAGTAAGCGAAAA GGGATGCGGCAT GTG ATGCCGCATCCG GCTTAAATCCAAACT TERM 1719 1232083 - 1232059 - T 100 -18.7 -3.18598 | opp_overlap 1232058, overlap 1232058 GAAGTAAGCGAAAAG GGATGCGGCAT GTG ATGCCGCATCC GGCTTAAATCCAAAC UTI89_C1257 1233229 - 1232099 - | YcfD protein phoQ 1234756 - 1233296 - | sensor protein PhoQ TERM 1720 1233905 - 1233915 + g 77 -8.2 -4.13014 | CGTACTTTGCAGCAC CGCC AGT GGCG TTTTCAGACTATGGG phoP 1235427 - 1234756 - | DNA-binding transcriptional regulator PhoP TERM 1721 1235587 - 1235556 - R 77 -9.4 -3.6968 | gap 1, opp_overlap 1235557, overlap 1235557 1235559 GGATAATCTTAATAA GCAG-GCCGGACAGC ATC GCCATCCGGCACTGT TTTGAGGCTTATTTC TERM 1722 1235586 - 1235557 - R 85 -12.9 -2.81326 | gap 1, opp_overlap 1235557, overlap 1235556 1235559 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG TTTTGAGGCTTATTT TERM 1723 1235557 - 1235586 + r 80 -8.5 -4.17523 | gap 1, opp_overlap 1235557 1235556 1235559 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG TTTTGAGGCTTATTT TERM 1724 1235583 - 1235559 - R 70 -9.9 -2.94759 | opp_overlap 1235557, overlap 1235557 1235556 TAATCTTAATAAGCA GGCCGGACAGC ATC GCCATCCGGCA CTGTTTTGAGGCTTA purB 1236966 - 1235596 - | adenylosuccinate lyase TERM 1725 1235965 - 1235985 + g 74 -8.3 -3.90588 | opp_overlap 1235979 GTCGGTCAGGTCACG CTGCCAG CGGGAAA CTGGCAG TTTGCTTGCCAGGTG ycfC 1237617 - 1236970 - | hypothetical protein TERM 1726 1237471 - 1237452 - G 75 -5.7 -4.59773 | gap 1, opp_overlap 1237453, overlap 1237453 CGCTACCGCCAAAAA CCGCCAGC GTTGA GCTGG-GG TTCATATCGATAATA trmU 1238798 - 1237647 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1727 1238663 - 1238649 - G 72 -7.8 -3.86346 | opp_overlap 1238651 CCAGTTCTTCATAAA CAGGCC TTC GACCTG ATATCCCTGTTGTTG TERM 1728 1238781 - 1238804 + g 70 -6 -4.18018 | gap 1, opp_overlap 1238775 GACATTGAACTTCAA GGCGGCGT-AT TCT ATCACGCAGCC TTTTAGATGACACCC ymfB 1239268 - 1238807 - | NUDIX family hydrolase rluE 1239901 - 1239278 - | 23S rRNA pseudouridine synthase E TERM 1729 1239879 - 1239891 + g 77 -2.7 -5.11613 | overlap 1239880 CGCTTAACCTGGTGA TTTCT AAA AGAAG TTTTTTGCATGGTAT UTI89_C1265 1241200 - 1240019 - | hypothetical protein icdA 1240103 - 1241353 + | isocitrate dehydrogenase TERM 1730 1241376 - 1241400 + Tr 89 -10 -4.49981 | opp_overlap 1241379, overlap 1241379 ATGTGTTAAATATTG AAACGGGCGT ATAAC ACGCCCGTTG TTTTATGATGATGTA TERM 1731 1241397 - 1241379 - TR 100 -12.4 -3.81137 | opp_overlap 1241376 1241379 TGTTAAATATTGAAA CGGGCGTA TAA CACGCCCG TTGTTTTATGATGAT TERM 1732 1241379 - 1241397 + Tr 95 -11.7 -4.35644 | opp_overlap 1241379, overlap 1241376 TGTTAAATATTGAAA CGGGCGT ATAAC ACGCCCG TTGTTTTATGATGAT UTI89_C1267 1242609 - 1241467 - | prophage lambda integrase TERM 1733 1241622 - 1241643 + g 72 -6.5 -4.39002 | opp_overlap 1241621 GCTGCTCATGAAATG TGGGCGCAG TTCC TTGCTCCCA TTTTATGCCACATTT UTI89_C1268 1242835 - 1242599 - | excisionase TERM 1734 1242927 - 1242969 + rH 74 -2.2 -5.22289 | opp_overlap 1242929, overlap 1242910 1242928 1242929 1242931 1242935 TCTTGACTGGTCATA GAGATAAATTTAATGCTG AGAAATG CAGTATTGAATTTATCAA TTTTTCTATTTCCTG UTI89_C1269 1243214 - 1242975 - | hypothetical protein UTI89_C1271 1243527 - 1243198 - | hypothetical protein UTI89_C1272 1243745 - 1243524 - | putative C4-type zinc finger protein UTI89_C1270 1243132 - 1243596 + | hypothetical protein TERM 1735 1243821 - 1243807 - TfRH 100 -7.8 -5.64873 | GCGAACAATAAAAAA GGAGCC TGT AGCTCC CTGATAATTTTGCTT UTI89_C1273 1244323 - 1244132 - | hypothetical protein UTI89_C1275 1245155 - 1244475 - | putative exonuclease encoded by prophage CP-933K UTI89_C1274 1244275 - 1244601 + | hypothetical protein bet 1245937 - 1245152 - | putative recombination protein Bet of prophage gamW 1246239 - 1245943 - | putative host-nuclease inhibitor protein Gam of bacteriphage UTI89_C1278 1246360 - 1246208 - | hypothetical protein kil1 1246584 - 1246315 - | Kil protein UTI89_C1280 1246591 - 1246427 - | lambda regulatory protein CIII TERM 1736 1246638 - 1246623 - R 82 -6.8 -4.9755 | opp_overlap 1246623 ATACATAACGAAAAA CGCCTC GAGT GAAGCG TAATTGGTATGCGGT UTI89_C1281 1247032 - 1246664 - | bacteriophage lambda putative single-stranded DNA binding protein TERM 1737 1247080 - 1247059 - R 95 -8 -5.4251 | overlap 1247061 CTCATAGATAAAAAA TCGCCCTC ACACTG GAGGGCAA AGAAGATTTCCAATA TERM 1738 1247132 - 1247177 + r 100 -12.7 -4.53119 | TTTAGTTACGAGCGA CATTGCTCCGTGTATTCACTC GTTG GAATGAATACACAGTGCAGTG TTTATTCTGTTATTT UTI89_C1282 1247415 - 1247215 - | lambda ant-restriction protein TERM 1739 1247793 - 1247811 + G 76 -7.4 -4.25859 | overlap 1247790 1247795 AATCCTTCCTCATTA CTGGATGT ATT ACATCCTG TTGTTTTGCGTTAGC TERM 1740 1247795 - 1247809 + G 72 -8.6 -3.72228 | overlap 1247793 1247790 TCCTTCCTCATTACT GGATGT ATT ACATCC TGTTGTTTTGCGTTA UTI89_C1283 1247629 - 1248210 + | putative superinfection exclusion protein B of prophage UTI89_C1284 1248571 - 1248227 - | N protein UTI89_C1285 1248659 - 1248477 - | hypothetical protein TERM 1741 1248930 - 1248913 - R 93 -9.8 -4.90778 | opp_overlap 1248913 GTGAGGCAAAGAAAA CCCGGC GCTGAG GCCGGG TTGTATTATGCTGCA TERM 1742 1248913 - 1248930 + r 79 -9.8 -3.77808 | opp_overlap 1248913 GTGAGGCAAAGAAAA CCCGGC GCTGAG GCCGGG TTGTATTATGCTGCA UTI89_C1286 1249688 - 1248936 - | hypothetical protein UTI89_C1287 1250242 - 1249685 - | hypothetical protein UTI89_C1288 1250935 - 1250282 - | putative CI repressor of bacteriophage TERM 1743 1250977 - 1250989 + H 74 -4.1 -4.99056 | TACTGGAACCATCCA TGCAC AAT GTGTA TTTTTACTTGTATTC TERM 1744 1251011 - 1251021 + H 100 -4 -5.85737 | opp_overlap 1251011 CTTGTATTCGCAAAG TACA TAT TGTA TTTTTTTATTCGTGT TERM 1745 1251276 - 1251260 - H 70 -6.5 -4.1891 | opp_overlap 1251256 1251270, overlap 1251261 CCGCCGGAACACAAA GCCGCTT AAT AAGCGGA TCCGCTCTTTGTAAC TERM 1746 1251275 - 1251261 - H 73 -10 -3.11024 | opp_overlap 1251256 1251270, overlap 1251260 CGCCGGAACACAAAG CCGCTT AAT AAGCGG ATCCGCTCTTTGTAA TERM 1747 1251678 - 1251659 - g 100 -9.2 -5.5112 | opp_overlap 1251659 CTCACCAATAAAAAA CGCCCGGC GGCA ACCGAGCG TTCTGAACAAATCCA UTI89_C1289 1251410 - 1251706 + | putative regulatory protein CII of bacteriophage TERM 1748 1252148 - 1252108 - g 85 -9.7 -4.27686 | opp_overlap 1252108, overlap 1252082 1252101 1252118 1252119 1252130 1252141 CAAAACGAGGGAAAA TCCCCTAAAACGAGGGATA AAA CATCCCTCAAATTGGGGGA TTGCTATCCCTCAAA TERM 1749 1252161 - 1252118 - g 81 -9 -4.14013 | gap 1, opp_overlap 1252108, overlap 1252108 1252119 1252130 1252141 GAAAATCCCCTAAAA CGAGGGATAAAACATCCCTCA AAT TGGGGGAT-TGCTATCCCTCA AAACAGGGGGACACA TERM 1750 1252238 - 1252207 - g 100 -4.4 -5.58051 | opp_overlap 1252212, overlap 1252209 1252210 1252212 1252224 AAAGAAAAAAGAAAA GATTATTCGTCAGA GAAT TCTGGCGAATCCTC TGACCAGCCAGAAAA UTI89_C1290 1251739 - 1252638 + | putative replication protein O of bacteriophage UTI89_C1291 1252635 - 1253336 + | putative replication protein P of bacteriophage UTI89_C1292 1253333 - 1253623 + | putative exclusion protein Ren of prophage TERM 1751 1253650 - 1253671 + F 95 -8.7 -5.27335 | gap 1, opp_overlap 1253648 1253650 ACTGAGCTAATAACA GGCCTGCAGG TAA TC-GCAGGCC TTTTTATTTGGGGGA TERM 1752 1253671 - 1253650 - f 74 -9.4 -3.42256 | opp_overlap 1253650, overlap 1253648 ACTGAGCTAATAACA GGCCTGCA GGTAAT CGCAGGCC TTTTTATTTGGGGGA ninB1 1253697 - 1254137 + | putative NinB protein encoded within prophage TERM 1753 1254184 - 1254194 + GF 75 -4.6 -4.7373 | overlap 1254176 1254174 GGACTGCTGGCAAAC GCCG CTT TGGC TTTTTGATGCACTGG UTI89_C1294 1254104 - 1254661 + | putative DNA N-6-adenine-methyltransferase of bacteriophage ninE1 1254658 - 1254834 + | NinE protein (phage 82- and lambda-like) proteins UTI89_C1296 1254837 - 1255178 + | hypothetical protein UTI89_C1297 1255171 - 1255365 + | hypothetical protein rusA 1255385 - 1255747 + | endodeoxyribonuclease RUS UTI89_C1299 1255744 - 1255884 + | hypothetical protein ybcQ1 1255955 - 1256353 + | lambdoid prophage DLP12 antitermination protein Q-like protein TERM 1754 1256404 - 1256385 - T 90 -9.2 -4.79667 | overlap 1256386 AAAAGTTATTAAAAA TGGGGCGT GGAA ACGCCCCC AAAATAAAGGGTAAT TERM 1755 1256403 - 1256386 - T 93 -12.7 -3.46174 | overlap 1256385 AAAGTTATTAAAAAT GGGGCGT GGAA ACGCCCC CAAAATAAAGGGTAA TERM 1756 1256490 - 1256525 + T 100 -14.2 -4.7497 | gap 1, overlap 1256492 CTTGAGGGCTCCACT TATATGTTGC-GGAGGC AAA GCCTCCCGCAACATATC TTTTTCGTAAGTCAG TERM 1757 1256492 - 1256523 + T 100 -16.8 -3.99327 | gap 1, overlap 1256490 TGAGGGCTCCACTTA TATGTTGC-GGAGGC AAA GCCTCCCGCAACATA TCTTTTTCGTAAGTC nmpC 1257684 - 1256542 - | outer membrane porin protein NmpC precursor TERM 1758 1258054 - 1258069 + H 84 -7.5 -4.95854 | opp_overlap 1258054 GTCACACAGCTTAAA CCCGC CGTCGA GCGGG TTTTTCCATTTTTTG TERM 1759 1258271 - 1258281 + G 72 -4.6 -4.67904 | overlap 1258253 1258266 CCTCAGCAGGTAGTG CCGG GTA CTGG TTTTTACAGTTGCTC ybcR1 1258213 - 1258428 + | hypothetical protein ybcS1 1258428 - 1258925 + | lysozyme from lambdoid prophage DLP12 UTI89_C1304 1258910 - 1259383 + | putative Rz endopeptidase from lambdoid prophage DLP12 TERM 1760 1259408 - 1259383 - T 89 -14.1 -2.90212 | overlap 1259368 1259385 TGAGCAGTGCAGATA GAGCTGCCCAT ATCG ATGGGCAACTC ATGCAATTATTGTGA TERM 1761 1259406 - 1259385 - T 76 -10.9 -3.002 | overlap 1259368 1259383 AGCAGTGCAGATAGA GCTGCCCAT ATCG ATGGGCAAC TCATGCAATTATTGT ybcU 1259756 - 1259415 - | lambdoid prophage DLP12 precursor Bor-like protein UTI89_C1307 1260315 - 1260163 - | hypothetical protein UTI89_C1306 1260135 - 1260515 + | TonB-like membrane protein encoded within prophage TERM 1762 1260630 - 1260608 - TfRH 95 -12.8 -3.70853 | opp_overlap 1260605 1260605 1260600 GGAATGATGGAAGAA GGCGTTGTAT GCC ACACAACGCC TCACTGTTCATTTCT UTI89_C1308 1260991 - 1260638 - | hypothetical protein UTI89_C1309 1260722 - 1260904 + | hypothetical protein TERM 1763 1261282 - 1261295 + G 73 -3.7 -4.7889 | overlap 1261281 CAACAGGTTACGGGG CGGCG ACCT CGCGG TTTTTCACTATTTAT TERM 1764 1261388 - 1261442 + G 100 -20.3 -3.87323 | opp_overlap 1261388 TATTGCATCCGTAAA GGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG TERM 1765 1261442 - 1261388 - g 85 -11.5 -3.57462 | opp_overlap 1261388 TATTGCATCCGTAAA GGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG UTI89_C1310 1261134 - 1261478 + | hypothetical protein TERM 1766 1261756 - 1261741 - gf 73 -6.1 -4.3739 | TACCGGCTCACAAAA GCGCA GGCAGA TGCGC AGGAACTGAAAAATG nohA1 1261468 - 1262016 + | Qin prophage packaging protein NU1-like protein TERM 1767 1262418 - 1262433 + GF 73 -4 -4.74132 | gap 1, opp_overlap 1262418 AACACCGCGATAATA CGC-TCA CCC TGAAGCG TTTTTCCTCCGGTGT TERM 1768 1262572 - 1262555 - gf 70 -4.1 -4.59773 | overlap 1262557 CCGGATGTTGAAAAA GAGGGTT CGCC AACCCTG CTGGGGGATAAACGT TERM 1769 1262679 - 1262663 - gf 72 -4.4 -4.70659 | gap 1 TGCCAGATCGAAAAA GCCG-CT AACG AGTCGGC ACACTTCATGCGTTT TERM 1770 1262741 - 1262757 + GF 71 -7.9 -3.77087 | CAGTATCTGAAATTT GGCGATG ATG CCTCGCC TTTCGGTCTTAAGTG TERM 1771 1262897 - 1262878 - gf 72 -7.1 -4.09685 | GTGGATCTGTGAAAA CACGGGC ATGTGG ACCCGTG ACGGCCTGATGTTTT TERM 1772 1263350 - 1263332 - gf 88 -2.3 -5.5112 | overlap 1263334 GCGATCAACAAAAAA TACCGCC ATGCA GACGGAA CCGAAATGACCATTT TERM 1773 1263515 - 1263501 - gf 89 -8.5 -4.63527 | TCACCATGCCAAAAA CCCGC AATCA GCGGG GCGTGTATCTGTGTG TERM 1774 1263623 - 1263641 + GF 76 -3.8 -5.00616 | overlap 1263625 TCGTATGCTATCCGT TTTCCTGA TGA TCCGGAGA TTTTTTCGCAGACAG UTI89_C1312 1261964 - 1263916 + | putative DNA packaging protein of prophage; terminase large subunit UTI89_C1313 1263900 - 1264106 + | putative DNA packaging protein of prophage TERM 1775 1264519 - 1264487 - g 93 -10.6 -4.41494 | opp_overlap 1264484, overlap 1264489 GACGTGGAAGGAAAA CGCACGTTCACGGA ATTTA TCCGTGAAGGTGTG GGCGTTCATGCGTTT TERM 1776 1264517 - 1264489 - g 72 -11.8 -2.54166 | opp_overlap 1264484, overlap 1264487 CGTGGAAGGAAAACG CACGTTCACGGA ATTTA TCCGTGAAGGTG TGGGCGTTCATGCGT TERM 1777 1265616 - 1265597 - g 72 -4.9 -4.61231 | overlap 1265598 GCAGAGCGGCAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGAGCAGGC UTI89_C1314 1264103 - 1265695 + | putative capsid protein of prophage TERM 1778 1265745 - 1265760 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC UTI89_C1315 1265685 - 1267190 + | head-tail preconnector protein gp5 of bacteriophage TERM 1779 1267551 - 1267526 - g 74 -2.4 -5.1244 | overlap 1267520 1267527 GGATGAACACAAAAA GGCCAACGCC TTTGCT GGCAGTGCCC TGAGTCACGCGGCGC UTI89_C1316 1267227 - 1267574 + | putative capsid protein small subunit of bacteriophage TERM 1780 1267579 - 1267607 + F 79 -9 -3.91897 | gap 1, overlap 1267581 CGCTGCCGTAACACG TTA-TCAGGCCAC CGCG GTGGCCTGACTGA TTTCTGAATGAAAGG TERM 1781 1267581 - 1267604 + F 76 -11 -3.02745 | overlap 1267579 CTGCCGTAACACGTT ATCAGGCCAC CGCG GTGGCCTGAC TGATTTCTGAATGAA TERM 1782 1267784 - 1267774 - g 88 -8.2 -4.652 | opp_overlap 1267774 1267776, overlap 1267765 1267775 1267776 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG UTI89_C1317 1267632 - 1268660 + | putative capsid protein gp7 of prophage TERM 1783 1268666 - 1268691 + GF 100 -9.7 -5.00616 | gap 1, opp_overlap 1268680 1268681, overlap 1268669 1268681 GGTGAAATAATCCGT GA-GCGGGGGCG AAA TGCCCCCGTGTC TTTTTTCACAGGGGG TERM 1784 1268669 - 1268687 + GF 100 -13.8 -3.66166 | opp_overlap 1268680 1268681, overlap 1268666 1268681 GAAATAATCCGTGAG CGGGGGCG AAA TGCCCCCG TGTCTTTTTTCACAG UTI89_C1318 1268664 - 1269086 + | hypothetical protein UTI89_C1319 1269058 - 1269432 + | putative head-tail joining protein of prophage UTI89_C1320 1269444 - 1270022 + | putative tail fiber component Z of prophage TERM 1785 1270072 - 1270106 + G 81 -7.1 -4.72272 | gap 1, overlap 1270075 ACTGGAGAAGCATGA CACCGGGGCGACGCTT TTTG ATG-GTCGCCCTGCTG TTTTTGATGAGGAAG TERM 1786 1270128 - 1270139 + G 70 -7.2 -4.03234 | ATGAGGAAGATTTTC CGGC AATT GCCG TTTATCTCACCGGCG UTI89_C1321 1270019 - 1270414 + | putative tail component of prophage TERM 1787 1271071 - 1271034 - g 79 -2.6 -5.18371 | opp_overlap 1271063, overlap 1271035 1271036 GCGGATAAAACAAAA GCCACCGTGTCGGTCA GTGGTA TGACCATCACCGTGAA CGGCGTTGCTGCAGG UTI89_C1322 1270392 - 1271162 + | putative tail component of prophage CP-933X TERM 1788 1271212 - 1271226 + G 81 -10 -3.91144 | opp_overlap 1271210 1271207 1271211 CATTTGAACATAACG GCGTGA CCG TCACGC TTTCTGAACTGTCAG UTI89_C1323 1271178 - 1271600 + | putative tail component of prophage TERM 1789 1271746 - 1271773 + G 90 -9.2 -4.58395 | gap 1 GGATATGCACTTTTC CGGGCTGACGTAC ACT GTGC-TCAGCCTG TTTTTCAGCGATCCG UTI89_C1324 1271582 - 1272016 + | putative tail component of prophage TERM 1790 1272152 - 1272127 - g 91 -5.3 -5.44119 | overlap 1272146 GTGATGCGAAAAAAA CAGCGGCAGTC GTTG AACAGTCGCTG AGCCGACAGGCGCTG TERM 1791 1273382 - 1273367 - g 81 -6.8 -4.60041 | AGCGACGCTGAAAAA GCCGAA ACAG TCCGGC GTGAAGGTGTCTGCG UTI89_C1325 1272009 - 1274570 + | putative tail component of prophage TERM 1792 1274588 - 1274574 - gT 73 -6.4 -4.30576 | GGTGGACGATGAAAA CCTTCC GCT GGAAAG TGAAACCCGGGATGG UTI89_C1327 1275450 - 1274800 - | hypothetical protein UTI89_C1326 1274567 - 1274896 + | minor tail protein TERM 1793 1275045 - 1275031 - Gg 80 -5.7 -4.94972 | GAGCAGAACGAAAAA GGTGA GCCGG TCACC TGGCAGGGGCGACAG TERM 1794 1275207 - 1275227 + Gg 90 -9.7 -4.42653 | overlap 1275209 CGGCGGAACGGTGGT CAGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT UTI89_C1328 1274896 - 1275594 + | putative tail component of prophage TERM 1795 1275626 - 1275610 - gfH 71 -9.5 -3.02649 | overlap 1275612 ATCCCATGACAGAGA CAGAATC AGC GATTCTG GCGCATGCCCGGCGA TERM 1796 1276104 - 1276136 + GFH 81 -9.7 -3.96298 | CAGGTGCCGTTGTCA GCGGCGCAGCCGGGC GAT GTGCTGCTGTGCTGC TTTGGTTCATCGGTG UTI89_C1329 1275600 - 1276343 + | putative tail component of prophage TERM 1797 1276829 - 1276844 + GF 73 -10.4 -3.00946 | opp_overlap 1276828 1276827, overlap 1276826 CTGTACGGTGAAATG CGCGTG GGGT CACGCG TGGTTTCTCAGGAGA UTI89_C1330 1276280 - 1276912 + | putative tail component of prophage TERM 1798 1276929 - 1276952 + F 81 -11.8 -3.01125 | opp_overlap 1276934, overlap 1276934 GCAAAATGTTTTATG TGAAACCGCC TCCG GGCGGTTTTA TCGTTTATGGAGCAT TERM 1799 1276947 - 1276934 - f 77 -9.5 -3.60098 | opp_overlap 1276929 1276934 ATGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTATCGTTTATGG TERM 1800 1276934 - 1276947 + F 91 -9.5 -4.64846 | opp_overlap 1276934, overlap 1276929 ATGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTATCGTTTATGG TERM 1801 1277123 - 1277103 - g 90 -7.5 -4.7497 | TGGATGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CGGTGCTGGACAGTG TERM 1802 1278734 - 1278709 - g 80 -11.9 -3.30441 | GAGTATCCGTGAGAA CGATGACGGCA CGTA TGCCATCACCG CCGTGCAGCATGTAC TERM 1803 1279169 - 1279181 + G 78 -9.1 -3.96148 | opp_overlap 1279161 CAGATAACCGCCACG CCGCA TCT TGCGG TTTATGATCCGACGG TERM 1804 1279579 - 1279568 - g 74 -5.8 -4.45068 | ACCGTCAATAAGAAA CTGG AAGA CCAG AGTGCAGCGATCCAG UTI89_C1331 1276973 - 1280455 + | putative tail component of prophage TERM 1805 1280475 - 1280492 + F 100 -12.7 -5.72622 | opp_overlap 1280465 1280473 TATAACCCAGATACG GGCGCCA GAAA TGGCGCC TTTTTTATTTGTGGA TERM 1806 1280654 - 1280639 - g 72 -6.1 -4.36914 | GGTGGCCTCAGAAAA TCCGG ATGAAG CCGGA CGTTACAGCATGGAT TERM 1807 1281151 - 1281135 - g 74 -5.8 -4.46212 | gap 1, overlap 1281136 1281137 GTCGCCACCACAAAA GC-GCGG GAGG CCGCAGC AGACGCAACAAAGGC UTI89_C1332 1280508 - 1282574 + | hypothetical protein UTI89_C1333 1282571 - 1282849 + | hypothetical protein UTI89_C1335 1283317 - 1282877 - | hypothetical protein UTI89_C1334 1282862 - 1283155 + | hypothetical protein sitD 1284104 - 1283247 - | SitD protein TERM 1808 1283276 - 1283286 + g 81 -6.8 -4.68424 | ACAGATCCTGTGTAT GGGA GTT TCCC TTTTTGCGTGCGTTG sitC 1284958 - 1284101 - | SitC protein TERM 1809 1284164 - 1284151 - G 74 -8.1 -4.10161 | GACGATTTGCCAAAA GCCCA TGGG TGGGC GCAAAGACAAATGCT sitB 1285782 - 1284955 - | SitB protein sitA 1286696 - 1285782 - | putative iron transport protein, periplasmic-binding protein SitA TERM 1810 1286732 - 1286747 + H 77 -7.6 -4.36914 | opp_overlap 1286732 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCACAACC TERM 1811 1286747 - 1286732 - H 80 -7.6 -4.4522 | opp_overlap 1286732 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCACAACC UTI89_C1340 1286975 - 1287259 + | hypothetical protein UTI89_C1341 1287383 - 1288153 + | hypothetical protein TERM 1812 1288418 - 1288395 - f 100 -13.2 -3.65314 | AACTGAGACACATAA GGCCTCGCAA TGGC TTGCAAGGCC ACACATGTATTGAGA TERM 1813 1288585 - 1288564 - f 74 -3.9 -4.96657 | ACAAAGACAAGAAAA TAATATTTA TGAT TAAATATCA GCGAGTTGAATACAT UTI89_C1342 1288625 - 1288777 + | isocitrate dehydrogenase, specific for NADP+ TERM 1814 1288800 - 1288824 + T 93 -10 -4.90455 | opp_overlap 1288803, overlap 1288803 ATGTGTTAAATATTG AAACGGGCGT ATAAC ACGCCCGTTG TTTTTATAAATATGT TERM 1815 1288803 - 1288821 + T 100 -11.7 -4.5448 | opp_overlap 1288803, overlap 1288800 TGTTAAATATTGAAA CGGGCGT ATAAC ACGCCCG TTGTTTTTATAAATA TERM 1816 1288821 - 1288803 - T 100 -12.4 -3.81137 | opp_overlap 1288800 1288803 TGTTAAATATTGAAA CGGGCGTA TAA CACGCCCG TTGTTTTTATAAATA ycgX 1289443 - 1289039 - | hypothetical protein TERM 1817 1289098 - 1289110 + g 70 -5.5 -4.3953 | GCGTATTATCAATGG CGTAG TAA CTGCG TTTGTTATGATTAAC ycgE 1290395 - 1289664 - | transcriptional regulator YcgE UTI89_C1345 1290457 - 1290305 - | hypothetical protein TERM 1818 1290481 - 1290446 - GR 75 -9.3 -3.70109 | TACACGACCCAATAA TACTTTGTACAATAT ATGCTA AAATTGTACAAAGTA TAAATAAGATTTCAG ycgF 1291889 - 1290600 - | hypothetical protein ycgZ 1292125 - 1292361 + | hypothetical protein UTI89_C1348 1292511 - 1292338 - | hypothetical protein ymgA 1292404 - 1292676 + | hypothetical protein UTI89_C1350 1293218 - 1292715 - | hypothetical protein UTI89_C1351 1293441 - 1293229 - | hypothetical protein TERM 1819 1293655 - 1293639 - g 81 -9.4 -4.13945 | ATCCTTATTGCAAAA CCCAGC ACCGG GCTGGG AGAAGTGCTTGTGAC UTI89_C1352 1293507 - 1293761 + | hypothetical protein UTI89_C1353 1295151 - 1295678 + | hypothetical protein TERM 1820 1295721 - 1295699 - T 100 -14.9 -5.1101 | CCATTAGCTAAAAAA CCGCGTCGA ATTCA TCGACGCGG TAACATATGAAATAT ymgD 1296071 - 1295736 - | hypothetical protein UTI89_C1355 1296419 - 1296075 - | hypothetical protein UTI89_C1356 1296594 - 1296421 - | hypothetical protein UTI89_C1357 1297012 - 1297338 + | hypothetical protein TERM 1821 1297354 - 1297369 + F 74 -2.4 -5.27335 | overlap 1297356 CCATCAACGATTAAA CTGCGT TTCG GCGCTG TTTTTGTTTACCGGG UTI89_C1358 1297384 - 1297569 + | hypothetical protein TERM 1822 1297686 - 1297659 - T 100 -15 -4.76041 | overlap 1297660 GAGAGGGATGAAAAA CTCAAGGCAGAG ATGA CTCTGCCTTGAA GATAAATGCGCTTTT TERM 1823 1297685 - 1297660 - T 100 -16.3 -3.44902 | overlap 1297659 AGAGGGATGAAAAAC TCAAGGCAGAG ATGA CTCTGCCTTGA AGATAAATGCGCTTT minE 1297977 - 1297711 - | cell division topological specificity factor MinE minD 1298793 - 1297981 - | cell division inhibitor MinD minC 1299512 - 1298817 - | septum formation inhibitor TERM 1824 1299185 - 1299200 + g 74 -2.4 -5.04222 | overlap 1299187 GAGCCTGCGGTGCGG GAGCTG GACG CGGCGC TTTTTCCTTTCCTTC UTI89_C1362 1299652 - 1299879 + | hypothetical protein ycgJ 1300032 - 1300400 + | hypothetical protein TERM 1825 1300490 - 1300512 + T 75 -9.8 -3.50456 | overlap 1300487 1300491 GGGGCGTTAACGTTT ATGACGGGGA GAG TCCCCGTCGG TTGATATTTACTTAA TERM 1826 1300491 - 1300511 + T 85 -13.3 -2.6955 | overlap 1300490 1300487 GGGCGTTAACGTTTA TGACGGGGA GAG TCCCCGTCG GTTGATATTTACTTA ycgK 1300921 - 1300520 - | protein YcgK precursor ycgL 1301130 - 1301456 + | hypothetical protein ycgM 1301528 - 1302187 + | hypothetical protein ycgN 1302279 - 1302725 + | hypothetical protein UTI89_C1368 1303214 - 1302996 - | hypothetical protein umuD 1303519 - 1303938 + | DNA polymerase V subunit UmuD umuC 1303938 - 1305206 + | DNA polymerase V subunit UmuC TERM 1827 1305242 - 1305225 - T 100 -12.7 -4.72986 | overlap 1305213 TAGCGGCAGGAAAAA GCGCTCC CGCA GGAGCGC CGAATGGATTAGCGA dsbB 1305787 - 1305251 - | disulfide bond formation protein B TERM 1828 1305893 - 1305920 + r 79 -9.8 -3.79113 | opp_overlap 1305891 1305897, overlap 1305897 TATCGGGCGAAAAGG CAAACCGGGCAT TTAT ATGCCCGGTAAG TTGTTATCAAAGCGT TERM 1829 1305916 - 1305897 - R 100 -13.6 -3.92659 | opp_overlap 1305893 1305897, overlap 1305891 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA TERM 1830 1305897 - 1305916 + r 86 -13.6 -2.68806 | opp_overlap 1305897 1305891, overlap 1305893 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA nhaB 1307522 - 1305927 - | sodium/proton antiporter TERM 1831 1306410 - 1306392 - G 80 -5.3 -4.88736 | gap 1 GACTACTGAGAAAAA CACCGTCA ACAG TG-CGGTG AATGGCAGAGATTCG fadR 1307690 - 1308409 + | fatty acid metabolism regulator TERM 1832 1308570 - 1308544 - T 89 -10.3 -4.58395 | gap 1, opp_overlap 1308545 1308547, overlap 1308545 1308547 CGCATCCGGCAAAAA TGAGTCCTCCTC AAAC GAGGAGGACT-A TTTACAGATTTCCCA TERM 1833 1308545 - 1308570 + T 89 -11.9 -3.63968 | opp_overlap 1308544 1308545 1308547, overlap 1308547 GCATCCGGCAAAAAT GAGTCCTCCTC AAAC GAGGAGGACTA TTTACAGATTTCCCA TERM 1834 1308570 - 1308545 - T 85 -11.9 -3.34716 | opp_overlap 1308545 1308547, overlap 1308544 1308547 GCATCCGGCAAAAAT GAGTCCTCCTC AAAC GAGGAGGACTA TTTACAGATTTCCCA TERM 1835 1308547 - 1308568 + T 100 -14.5 -3.39772 | opp_overlap 1308544 1308545 1308547, overlap 1308545 ATCCGGCAAAAATGA GTCCTCCTC AAAC GAGGAGGAC TATTTACAGATTTCC TERM 1836 1308568 - 1308547 - T 95 -14.5 -3.23975 | opp_overlap 1308547 1308545, overlap 1308544 1308545 ATCCGGCAAAAATGA GTCCTCCTC AAAC GAGGAGGAC TATTTACAGATTTCC ycgB 1310104 - 1308572 - | hypothetical protein TERM 1837 1309515 - 1309527 + g 76 -4.1 -5.01732 | TGCCGGGCTTTCTCT TCTTG CAG CGAGA TTTTTTGCGGGCGTT TERM 1838 1310890 - 1310880 - g 81 -8.2 -4.36063 | ACAACAGTATGAAAA CGCG ACC CGCG ATATCGCCGTGCTGG dadA 1310428 - 1311732 + | D-amino acid dehydrogenase small subunit dadX 1311742 - 1312812 + | alanine racemase ycgO 1314605 - 1312869 - | potassium/proton antiporter ldcA 1315614 - 1314700 - | L,D-carboxypeptidase A TERM 1839 1315555 - 1315569 + gH 71 -7.8 -3.74693 | overlap 1315551 GCGCTGGATACCACG CAGCGC GGC GTGCTG TTTAATGCAGTAACC mltE 1315600 - 1316325 + | murein transglycosylase E ycgR 1317061 - 1316327 - | hypothetical protein TERM 1840 1316393 - 1316451 + g 70 -10.4 -3.14257 | AATAATCCGCTGTAA TTGCCGCTCCACCGTC-GGGCTGACGTT AAGAA AACGGAAGCTCAGACGG-GGAGTGGTGA TGGTTTCATTTTTGC ymgE 1317229 - 1317516 + | transglycosylase associated protein TERM 1841 1317559 - 1317528 - T 74 -9.4 -3.33583 | opp_overlap 1317529, overlap 1317529 ATAAGATTTTCATAA GGCGGATAGCGATA CAGA TGCCGCTATCCGCT TTCACATCAGAACGT TERM 1842 1317558 - 1317529 - T 84 -12.9 -2.59668 | opp_overlap 1317529, overlap 1317528 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 1843 1317529 - 1317558 + T 100 -12.9 -3.59979 | opp_overlap 1317529 1317528 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG prrA 1319557 - 1317566 - | TonB dependent outer membrane receptor TERM 1844 1317711 - 1317730 + g 71 -2.7 -4.83615 | overlap 1317715 TCGGCTCGAATGTGG GTCACCG CAAAAC CGGCGGC TTTTTGTGAACCGTC TERM 1845 1318582 - 1318594 + g 100 -4.7 -5.93252 | opp_overlap 1318582 TGTAATCGGAATAAT GGCTG TAG CTGCC TTTTTTATTTTTCAA modD 1320416 - 1319562 - | molybdenum transport protein ModD UTI89_C1385 1321225 - 1320413 - | hypothetical protein UTI89_C1386 1321993 - 1321235 - | putative iron compound ABC transporter, ATP-binding protein TERM 1846 1321757 - 1321729 - G 74 -2.4 -5.1166 | gap 2, opp_overlap 1321729, overlap 1321730 CACTAAAAGCAAAAA TGCCGTCGTGCGCC TGC GGCACCC-A-GGCA ATAGCCTGCGCGCGC UTI89_C1387 1322970 - 1321990 - | putative iron compound ABC transporter, permease protein TERM 1847 1322831 - 1322848 + g 88 -8.5 -4.63218 | opp_overlap 1322830 TGCCAGAAGACAATT TGTTCCT GCAC AGGAACA TTTTCTTGACGAAGA UTI89_C1388 1323992 - 1322970 - | hypothetical protein TERM 1848 1323871 - 1323905 + g 72 -8.7 -3.72984 | gap 1 ACGATGCGTGTAATG TTTTGGGCTTCG-GGA AGCG TCCGTGAGGCCCAGAA TTTGACTGATTGTGC TERM 1849 1324041 - 1324016 - RH 72 -5.5 -4.48987 | overlap 1324017 TCCTGATAATTAAAA CCGCTATATAC TTAC ACATATAGCGA AAAAGATCATGTTTG TERM 1850 1324314 - 1324278 - RH 72 -6.7 -4.24342 | TTCGTGATGAAGAAA GAGCAATGCCAAT TTTATGCACGT AATGGCATTGCTC GATATACAGTAAAGT TERM 1851 1324331 - 1324349 + rH 79 -3 -5.45802 | opp_overlap 1324333, overlap 1324333 ATATACAGTAAAGTT AAGGCGTA GGT TCCGCCTC TTTTTGTTTTAGCGG TERM 1852 1324333 - 1324347 + rH 70 -5.6 -4.3613 | opp_overlap 1324333, overlap 1324331 ATACAGTAAAGTTAA GGCGTA GGT TCCGCC TCTTTTTGTTTTAGC treA 1326026 - 1324329 - | trehalase UTI89_C1390 1325971 - 1326186 + | hypothetical protein TERM 1853 1326337 - 1326306 - TR 70 -9.6 -2.90078 | gap 1, opp_overlap 1326305 1326329, overlap 1326305 CAGTGCAGAGTAAAT TGCCGGATGACATCA GAA TGATGCCATCCGA-A CGGTGGTTTAACCCT ycgC 1327769 - 1326345 - | dihydroxyacetone kinase subunit M TERM 1854 1327250 - 1327235 - G 74 -8.2 -4.00066 | overlap 1327238 TCGATAAGGTATAAA CCAGCC GGGA GGCCGG ACGTACATGCAGGCC ycgS 1328484 - 1327774 - | dihydroxyacetone kinase ADP-binding subunit TERM 1855 1327822 - 1327878 + gr 77 -9.4 -3.5774 | gap 1, opp_overlap 1327815 1327869, overlap 1327876 CATAAACATCACCGA GGTCGCGCCGG-GATCCTGGTGACC AATACTGC GTTCACCGAGATAACTGGCGCGGCC TTTGCGGGCTTGCAT ycgT 1329517 - 1328417 - | dihydroxyacetone kinase subunit DhaK TERM 1856 1329602 - 1329622 + H 70 -9.9 -2.97934 | opp_overlap 1329601 1329602 1329604, overlap 1329604 AAAATTAGCCCAAAT TATGTTTCA TAG TGAAACATA TGCTTTAATGAATGT TERM 1857 1330596 - 1330608 + G 79 -4.7 -4.90302 | opp_overlap 1330596 ACCGATAATAGAAAC GCAGG GAA CCAGC TTTATTTTATTGCTC TERM 1858 1330962 - 1330974 + G 72 -6.9 -4.15788 | GCTGGAACTGGCGCA CGGCG GCA CGCTG TTTCTTGAAAAGATT UTI89_C1394 1329706 - 1331634 + | DNA-binding transcriptional regulator DhaR TERM 1859 1331632 - 1331660 + TF 81 -12.6 -2.58767 | gap 1, overlap 1331627 TTTAAGCGCCGTGGA TA-GCGGGAGAGT ATGC ACTCTCCCGCGTA TGACTTGCTAATTAA UTI89_C1396 1331902 - 1331672 - | hypothetical protein UTI89_C1395 1331644 - 1331829 + | hypothetical protein TERM 1860 1331980 - 1332006 + Tr 87 -13.9 -2.93073 | opp_overlap 1331980, overlap 1331969 1331977 AGCAGGCGTAAAAAA GCCATTATGTG CGACT CACATAATGGC TCGTTATTAACCGCC TERM 1861 1332006 - 1331980 - TR 100 -13.9 -5.03715 | opp_overlap 1331969 1331980 1331977 AGCAGGCGTAAAAAA GCCATTATGTG CGACT CACATAATGGC TCGTTATTAACCGCC ychF 1333129 - 1332038 - | translation-associated GTPase TERM 1862 1332594 - 1332608 + g 70 -7.1 -4.11216 | CTTAAATCCAGCGCA CGCAG CATAC CTGCG TTTTCCAGCTGGGGC TERM 1863 1332668 - 1332679 + g 72 -5.8 -4.38927 | TTTCGCGTCTTTATC GCCA CCTT TGGC TTTCTTCTGTACGCG pth 1333830 - 1333246 - | peptidyl-tRNA hydrolase TERM 1864 1333916 - 1333900 - H 74 -2.2 -5.24129 | opp_overlap 1333912, overlap 1333912 1333913 CCGCTTGACAAAAAA CTGCGT ATCAA ATGCAG ATAATGCAATTATTG ychH 1334108 - 1334386 + | hypothetical protein TERM 1865 1334403 - 1334432 + T 78 -11.5 -2.87963 | overlap 1334403 AAATAATGCAGTTTG CTGACCAGTCAGT TTGC GCTGACTGGTCAA TCTCGTACTTATAAA ychM 1336120 - 1334441 - | putative sulfate transporter YchM TERM 1866 1336226 - 1336213 - R 100 -9.5 -5.76633 | opp_overlap 1336211 1336213 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT TERM 1867 1336213 - 1336226 + r 74 -9.5 -3.34894 | opp_overlap 1336213, overlap 1336211 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT prsA 1337258 - 1336245 - | ribose-phosphate pyrophosphokinase TERM 1868 1337323 - 1337309 - R 78 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAACTCAGCTTGCC ychB 1338194 - 1337343 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 1338883 - 1338194 - | outer membrane lipoprotein LolB TERM 1869 1338420 - 1338445 + gH 75 -9.1 -3.5882 | CACTGGCGCAAGCTG TTGAGCGGAAT TGGC ATTCCGGTCAA TTTGCCAATCATCTC hemA 1338833 - 1340287 + | glutamyl-tRNA reductase TERM 1870 1341196 - 1341184 - g 70 -6.2 -4.24002 | GCTGAAATGGCAAAA CGGC AACAG GCCG AAGCGTCTACCCGTC prfA 1340329 - 1341411 + | peptide chain release factor 1 TERM 1871 1342227 - 1342211 - g 72 -10.1 -3.31792 | TGACTATGGGGATAA CGAGCGC GTA ACGCTCG GCCGCTATTATCAAT hemK 1341411 - 1342244 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase sirB2 1342241 - 1342633 + | putative transcriptional regulator ychA 1342637 - 1343446 + | putative transcriptional regulator kdsA 1343482 - 1344336 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1872 1344358 - 1344380 + G 100 -9.2 -5.64274 | opp_overlap 1344358 TGTTTGAAAAATAAA GTCTTAGCGT TCT GCGTTAAGAC TTTTTTTATGGGTGC TERM 1873 1344380 - 1344358 - g 81 -6.3 -4.85782 | opp_overlap 1344358 TGTTTGAAAAATAAA GTCTTAGCG TTCTG CGTTAAGAC TTTTTTTATGGGTGC TERM 1874 1344434 - 1344409 - g 100 -13.3 -5.36441 | opp_overlap 1344408 1344407 1344428 GCCGGATACAAAAAA GGCCGCAGG CTGTTACC CCTGCGGCC GGTTTCGGGCGCATA TERM 1875 1344440 - 1344475 + G 76 -7.5 -4.21768 | gap 1, overlap 1344428 CCCTGCGGCCGGTTT CGGGCG-CATATTGCC ATCAC GGCAGCCTGACGCCCG TTTTCACCTTACTTC UTI89_C1410 1344346 - 1344609 + | hypothetical protein TERM 1876 1344658 - 1344699 + T 91 -10.1 -4.78848 | gap 1, opp_overlap 1344657, overlap 1344621 1344620 ATGGTTCAAGATTAG CCCCCGTTCTGTTGTCAGGT TTT ACCTCTCAAC-GTGCGGGGG TTTTCTCTTTCCAGC TERM 1877 1344988 - 1344960 - T 74 -11.1 -2.67209 | CAGGAATTTATATTA TCTCCCCCGAT TTCCGTC ATCGGAGGAGA TATAACTGTCAGGCA chaA 1346184 - 1344997 - | calcium/sodium:proton antiporter UTI89_C1412 1346660 - 1346361 - | hypothetical protein TERM 1878 1346508 - 1346487 - Gg 72 -6.5 -4.30253 | overlap 1346490 TATAAAGATAAAGAA GATCGGCGT GATG ACGCCAGTC GCGAAGAAACAGCGC chaB 1346367 - 1346597 + | cation transport regulator TERM 1879 1346710 - 1346698 - fH 71 -4.1 -4.7871 | AATGAGCAGTAAAAA TGTCC GGA AGACA CCAAAAAGTTGTCGC chaC 1346719 - 1347450 + | cation transport protein ChaC ychN 1347847 - 1347494 - | hypothetical protein ychP 1348032 - 1349426 + | hypothetical protein narL 1350143 - 1349427 - | transcriptional regulator NarL narX 1351866 - 1350070 - | nitrate/nitrite sensor protein NarX TERM 1880 1350144 - 1350121 - G 70 -6 -4.15044 | gap 1, opp_overlap 1350121 TTTTTCGGGAATAAA GGTGACCACCA CTT CGGT-GCCACC TGATTCACGACGGCG TERM 1881 1350833 - 1350809 - GH 81 -12.1 -3.04792 | TGATCATGGCTAAGA TGACGCCCCTG CGG CAGGGTCGCCA GCAAAATACCGTACT TERM 1882 1352072 - 1352054 - g 75 -5.4 -4.60487 | opp_overlap 1352030, overlap 1352056 CAGCACCGTGAAAAA TCTCATAA TTT TTATGAAA TCACTGTACTCACTA UTI89_C1419 1351892 - 1352110 + | hypothetical protein TERM 1883 1352391 - 1352401 + G 81 -6.8 -4.67038 | opp_overlap 1352391 GTTGCGGTGAACTTA CCGA AAG TCGG TTTTAATTTTACGAC narK 1352199 - 1353596 + | nitrite extrusion protein TERM 1884 1353620 - 1353638 + F 100 -12.4 -5.64274 | ATTTGATTATCCTTT GCGCGGCA TGA TGTCGCGC TTTTTTTATGCGTCA TERM 1885 1354275 - 1354256 - g 76 -10.6 -3.32769 | opp_overlap 1354274, overlap 1354249 CTGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG TGCCAGCTACTCCTG TERM 1886 1356390 - 1356403 + G 72 -6.7 -4.1552 | ACGACATGAATACTT CGGAT ATGC ATCCG TTTATTCACCCGCTG narG 1353989 - 1357732 + | respiratory nitrate reductase 1 alpha chain TERM 1887 1357826 - 1357812 - g 75 -5.6 -4.60041 | AGTGACCTGTAAAAA CGTCTG GAC CAGCCG TGAAGGCGTGGAATA narH 1357729 - 1359267 + | respiratory nitrate reductase 1 beta chain TERM 1888 1359380 - 1359396 + G 76 -8 -4.25848 | opp_overlap 1359380 1359375, overlap 1359386 TCTGCCAAAAGAGGA TGCCCA TGCGC TGGGCA TTTTCCTGCGCGATT narJ 1359264 - 1359974 + | nitrate reductase 1 delta subunit narI 1359974 - 1360651 + | nitrate reductase 1, cytochrome b(NR), gamma subunit UTI89_C1425 1361933 - 1360704 - | Tpn1330-like protein TERM 1889 1360756 - 1360778 + g 78 -8.4 -4.19238 | opp_overlap 1360757 1360760, overlap 1360757 CTGGTGAGGTGATTA AGAATGGTGC TTA GCACCGTTCG TTTTAAAATTAGCGG TERM 1890 1360777 - 1360757 - G 70 -9.7 -3.16564 | opp_overlap 1360756 1360757, overlap 1360760 TGGTGAGGTGATTAA GAATGGTGC TTA GCACCGTTC GTTTTAAAATTAGCG TERM 1891 1360757 - 1360777 + g 75 -11.9 -3.11222 | opp_overlap 1360757 1360760, overlap 1360756 TGGTGAGGTGATTAA GAATGGTGC TTA GCACCGTTC GTTTTAAAATTAGCG TERM 1892 1360820 - 1360787 - G 95 -12.5 -4.07568 | opp_overlap 1360798 CCGTTCGTTTTAAAA TTAGCGGGGAGTGTC GTAA GACATTCTCCGCTAA CGTCAGATACGAGAT TERM 1893 1361972 - 1362009 + r 100 -4.7 -5.93809 | gap 1 GCCTGTCTTTTTTTA CCCGCC-CATTACTGGGG ATT CCTCAGCGCTCCGGCGGG TTTTTTTTATGGGCA purU 1363538 - 1362696 - | formyltetrahydrofolate deformylase TERM 1894 1362741 - 1362729 - G 77 -6.9 -4.44448 | ATTACCGTAAACAAA GACGC GCT GCGCC AGTACTTTGTATAGC ychJ 1364046 - 1363588 - | hypothetical protein ychK 1364120 - 1365064 + | hypothetical protein rssB 1365156 - 1366169 + | response regulator of RpoS TERM 1895 1366995 - 1366983 - g 71 -3.3 -4.77757 | GTTGAAAAACCAAAA GCGGA TGT TGCGC CGTCTAATCTCGCTA galU 1366371 - 1367279 + | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 1896 1367306 - 1367327 + TF 100 -12.3 -5.66684 | opp_overlap 1367283 1367306 GTGTTTTCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1897 1367327 - 1367306 - Tf 80 -10.1 -3.72576 | opp_overlap 1367306, overlap 1367283 GTGTTTTCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1898 1367395 - 1367379 - Tf 100 -13.7 -5.55769 | opp_overlap 1367379 CCGGACAATAAAAAA TCCCGCC GAT GGCGGGA TTTTTAGCATGTGCA TERM 1899 1367379 - 1367395 + TF 100 -13.7 -4.64766 | opp_overlap 1367379 CCGGACAATAAAAAA TCCCGCC GAT GGCGGGA TTTTTAGCATGTGCA hns 1367836 - 1367423 - | global DNA-binding transcriptional dual regulator H-NS TERM 1900 1367500 - 1367514 + Gg 77 -7.1 -4.55128 | CAGCTGGAGTACGGC CCTGG CCAGT CCAGG TTTTAGTTTCGCCGT UTI89_C1433 1367387 - 1367740 + | hypothetical protein UTI89_C1435 1368056 - 1367928 - | hypothetical protein tdk 1368440 - 1369057 + | thymidine kinase UTI89_C1437 1370389 - 1369184 - | transposase InsG for insertion sequence element IS4 TERM 1901 1369331 - 1369360 + g 91 -9.3 -4.59109 | overlap 1369333 GCCCCAGAAGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1902 1369333 - 1369358 + g 100 -16.3 -3.90762 | overlap 1369331 CCCAGAAGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 1903 1370428 - 1370391 - R 89 -14.4 -2.86164 | opp_overlap 1370397, overlap 1370397 TGCCCAATGAGCATA CAAAAATCCGGAAACG AGTGAG CGTTTCCGGATTCTTA CACAGCCACTGGATC TERM 1904 1370422 - 1370397 - R 100 -13.4 -5.01497 | opp_overlap 1370397, overlap 1370391 ATGAGCATACAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1905 1370397 - 1370422 + r 100 -13.4 -3.61398 | opp_overlap 1370397 1370391 ATGAGCATACAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1906 1370519 - 1370532 + r 80 -4.5 -5.28826 | opp_overlap 1370519 AGCGCTACTGATTAA GCGGA TTTT TTCGC TTTTTTCTCAGCTTT adhE 1373190 - 1370515 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1907 1370549 - 1370559 + g 78 -8.2 -4.22554 | overlap 1370552 TTTTTCTCAGCTTTA GCCG GAG CGGC TTCTTTCTTCGCTGC TERM 1908 1373361 - 1373339 - H 71 -7.8 -3.71687 | CTAAAAGAGTTTAAA CATTAGAGTT ATT ATCTCTAATG CGTCACTTCCAGGTG ychE 1373667 - 1374314 + | hypothetical protein TERM 1909 1374331 - 1374348 + T 76 -8.4 -3.98113 | opp_overlap 1374316 1374331 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA TERM 1910 1374348 - 1374331 - T 78 -8.4 -4.05788 | opp_overlap 1374331, overlap 1374316 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA UTI89_C1440 1374786 - 1374472 - | hypothetical protein TERM 1911 1374874 - 1374852 - H 74 -7.8 -4.08557 | GTCGCGAAAGAATAA TGTGTCTC GACAGGG GAGACACA GTACGAATCGACATA oppA 1374980 - 1376683 + | periplasmic oligopeptide-binding protein precursor TERM 1912 1376686 - 1376726 + F 80 -7 -4.87786 | gap 2, opp_overlap 1376692, overlap 1376687 1376690 1376691 TGTGAAGCACTAATG GCA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTGA TTTTTATCGCATTAC TERM 1913 1376687 - 1376725 + F 77 -10.5 -3.51948 | gap 2, opp_overlap 1376692, overlap 1376686 1376690 1376691 GTGAAGCACTAATGG CA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTG ATTTTTATCGCATTA TERM 1914 1376690 - 1376721 + F 86 -12.4 -3.22077 | gap 1, opp_overlap 1376692, overlap 1376687 1376686 1376691 AAGCACTAATGGCAA TAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTG TCTGATTTTTATCGC TERM 1915 1376691 - 1376719 + F 100 -15.3 -3.16187 | opp_overlap 1376692, overlap 1376690 1376687 1376686 AGCACTAATGGCAAT ACGTGGGGCAGGA GTG TCCTGCTCCACGG TGTCTGATTTTTATC TERM 1916 1376718 - 1376692 - f 100 -16.6 -3.10464 | opp_overlap 1376691 1376690 1376687 1376686 GCACTAATGGCAATA CGTGGGGCAGGA GTG TCCTGCTCCACG GTGTCTGATTTTTAT TERM 1917 1377178 - 1377196 + G 70 -4.4 -4.5442 | opp_overlap 1377178, overlap 1377163 1377180 TGGGGCTGGCAATGA CCGGGGTT GTT ATCCCCAG TTTTGTGGTTGCGCC TERM 1918 1377610 - 1377627 + G 74 -2.7 -4.93877 | overlap 1377617 TAAGTCTGACCATTC TGGTTGG CGCG TTAACCA TTTTGTTTAATGCCA oppB 1376769 - 1377689 + | oligopeptide transporter permease TERM 1919 1377736 - 1377724 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1377704 - 1378612 + | oligopeptide transport system permease protein oppC oppD 1378624 - 1379637 + | oligopeptide transporter ATP-binding component TERM 1920 1380490 - 1380472 - g 93 -8.8 -4.95547 | TGGAGAAGAACAAAA CCATCCAG TTA CTGGAAGG GGAATTACCGTCGCC oppF 1379634 - 1380638 + | oligopeptide transport ATP-binding protein OppF TERM 1921 1380673 - 1380641 - T 82 -10 -4.08216 | gap 1, opp_overlap 1380648, overlap 1380648 CGATCCGCTTTAAAA GCAATAAGGGCTGAC AGTT GTCAGCCCTTTTT-C ACGCCAAAAGCGATT TERM 1922 1380667 - 1380648 - T 100 -13.6 -3.965 | opp_overlap 1380648, overlap 1380641 CTTTAAAAGCAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCCAAAA TERM 1923 1380648 - 1380667 + T 100 -13.6 -4.56597 | opp_overlap 1380641 1380648 CTTTAAAAGCAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCCAAAA yciU 1381098 - 1380691 - | dsDNA-mimic protein cls 1382515 - 1381055 - | cardiolipin synthetase TERM 1924 1381096 - 1381084 - G 78 -9.1 -3.88577 | overlap 1381082 TGAAGAAGTAAAACA GTCGC TCG GCGAC ACGTTGCCATAATGG TERM 1925 1381722 - 1381693 - GH 80 -8.5 -4.2461 | opp_overlap 1381695, overlap 1381696 1381697 AGTCGCAGGAATAAA TAATCCCCATCGC GGTG GCGATGGGGCCTT CCATACGCGCCATCA TERM 1926 1381719 - 1381696 - GH 100 -12.4 -4.24413 | opp_overlap 1381695, overlap 1381693 1381697 CGCAGGAATAAATAA TCCCCATCGC GGTG GCGATGGGGC CTTCCATACGCGCCA TERM 1927 1381718 - 1381697 - GH 100 -15.9 -3.13925 | opp_overlap 1381695, overlap 1381696 1381693 GCAGGAATAAATAAT CCCCATCGC GGTG GCGATGGGG CCTTCCATACGCGCC TERM 1928 1381982 - 1381959 - GH 74 -3 -5.00616 | overlap 1381963 GGGCTGCGGAAAAAA GCCACACTCC CGGC GGAGTCGAGC ATCAATCGGCAATGA UTI89_C1448 1382547 - 1382831 + | hypothetical protein TERM 1929 1382862 - 1382833 - T 75 -8.7 -3.79071 | gap 1, opp_overlap 1382833 1382829 1382828 1382834 1382837, overlap 1382834 1382837 TCTACAATATCTAAA TGTACTGGGCACCA TTG CGGTGCCCAATA-A GTTTACTCTTCCGTC TERM 1930 1382862 - 1382834 - T 72 -10.3 -2.86961 | opp_overlap 1382834 1382833 1382829 1382828 1382837, overlap 1382833 1382837 CTACAATATCTAAAT GTACTGGGCACCA TTG CGGTGCCCAATAA GTTTACTCTTCCGTC TERM 1931 1382859 - 1382837 - T 79 -12 -2.67958 | opp_overlap 1382837 1382834 1382833 1382829 1382828, overlap 1382833 1382834 CAATATCTAAATGTA CTGGGCACCA TTG CGGTGCCCAA TAAGTTTACTCTTCC kch 1384157 - 1382886 - | voltage-gated potassium channel TERM 1932 1384422 - 1384392 - R 77 -9.1 -3.74178 | opp_overlap 1384395, overlap 1384398 TAAGGAAAGGCCAAA CAAGAACACGGTT GCAAA AACCGTGCCCTTA AATATTGAATTTCTA TERM 1933 1384416 - 1384398 - R 80 -8.9 -4.1023 | opp_overlap 1384395, overlap 1384392 AAGGCCAAACAAGAA CACGGTT GCAAA AACCGTG CCCTTAAATATTGAA yciI 1384735 - 1384439 - | YciI-like protein UTI89_C1452 1385386 - 1385141 - | hypothetical protein TERM 1934 1385589 - 1385579 - gR 81 -6.8 -4.62069 | GCGTGAGGTGAAAAA TGCG ATG CGCA GATGGCGTTATGAGC tonB 1384908 - 1385675 + | transport protein TonB TERM 1935 1385712 - 1385683 - TR 100 -13.7 -4.08144 | opp_overlap 1385684 1385690, overlap 1385684 1385690 TTCAGTAAGCATAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAT TATTACTCAACGGGT TERM 1936 1385684 - 1385711 + Tr 100 -17.2 -3.71848 | opp_overlap 1385683 1385684 1385690, overlap 1385690 TCAGTAAGCATAAAG TCAAAAGCCTCC GACC GGAGGCTTTTGA TTATTACTCAACGGG TERM 1937 1385711 - 1385684 - TR 100 -17.2 -3.04404 | opp_overlap 1385684 1385690, overlap 1385683 1385690 TCAGTAAGCATAAAG TCAAAAGCCTCC GACC GGAGGCTTTTGA TTATTACTCAACGGG TERM 1938 1385690 - 1385705 + Tr 89 -10.4 -4.5774 | opp_overlap 1385684 1385683 1385690, overlap 1385684 AGCATAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGATTATTACTC TERM 1939 1385705 - 1385690 - TR 87 -10.4 -4.40173 | opp_overlap 1385690 1385684, overlap 1385684 1385683 AGCATAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGATTATTACTC yciA 1386113 - 1385715 - | acyl-CoA thioester hydrolase TERM 1940 1386166 - 1386132 - R 88 -10.8 -4.22948 | overlap 1386138 AAAACCGACTTAAAA GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC TGAGGAGAACAGAGG ispZ 1386758 - 1386219 - | intracellular septation protein A TERM 1941 1386449 - 1386465 + g 72 -4.3 -4.7254 | overlap 1386450 GTTCTTTACCCAGCA TCCGCTG AAT TAGCGGC TTTTTCATCACCCAT yciC 1387531 - 1386788 - | hypothetical protein ompW 1387809 - 1388525 + | outer membrane protein W TERM 1942 1388582 - 1388564 - T 93 -11.8 -4.08064 | opp_overlap 1388564 AACCCCTCTGCAAAA CTGGTCAT CAA ATGACCAG TTTTTTCCATTCCTT TERM 1943 1388564 - 1388582 + T 100 -11.8 -5.1848 | opp_overlap 1388564 AACCCCTCTGCAAAA CTGGTCAT CAA ATGACCAG TTTTTTCCATTCCTT intO 1389701 - 1388571 - | putative integrase for prophage CP-933O TERM 1944 1388943 - 1388953 + g 79 -2.4 -5.27779 | CAGAGGGATGGCAAT CCGG GTT CCTG TTTTTTGCTGTTCGA TERM 1945 1389012 - 1389000 - G 70 -6.3 -4.16943 | opp_overlap 1388999 CCGGATATCCGAAAA TTGCA TTT TGCAA ATATCTGAAAGGCGC TERM 1946 1389138 - 1389149 + g 95 -7.2 -5.43866 | TCGCTGTCTTGATAT CCGC ACCT GCGG TTTTTTTGCCGATTC TERM 1947 1389665 - 1389676 + g 76 -3.6 -4.89567 | opp_overlap 1389654 AATACGGAGATAATC CCGG AACA TCGG TTTTATATTTTCGCG UTI89_C1458 1389927 - 1389679 - | putative excisionase TERM 1948 1390004 - 1390018 + r 71 -5 -4.58395 | ACATTAAAAATCAGC CTGATT TGG GATCAG TTTTTGCCAGATAGC exoO 1392463 - 1389992 - | putative exonuclease VIII, ds DNA exonuclease encoded by prophage CP-933O TERM 1949 1390180 - 1390197 + g 76 -12.7 -2.55351 | opp_overlap 1390173, overlap 1390179 TGTAGTAACGCCACG GGCAGGG GATC CCCTGCC GTTCGTATGAACGGC TERM 1950 1390794 - 1390816 + g 77 -6.3 -4.67904 | gap 1 CAGTTGCCGCCGCCG GTCTG-ACCG CAGG CGGTGCAGGC TTTTTCCACTTCCTG TERM 1951 1391249 - 1391260 + g 71 -2.2 -4.89339 | ACCAGAAAGTTTGTT TGCG CGAC CGTA TTTTTCTCCGTCCTT UTI89_C1460 1392756 - 1392556 - | hypothetical protein UTI89_C1461 1393037 - 1392744 - | putative regulator of cell division encoded by prophage CP-933O UTI89_C1462 1393043 - 1393198 + | hypothetical protein ydfC 1393719 - 1393498 - | hypothetical protein ydfB 1393919 - 1393749 - | hypothetical protein TERM 1952 1393826 - 1393851 + gr 76 -7.5 -4.24963 | CTTCGCCTTCGGCAA GGCCTTCGAAG TATT CTTCGTAAGCC TTTTCCATGATTGTG ydfA 1394115 - 1393879 - | hypothetical protein TERM 1953 1394236 - 1394226 - R 71 -4 -4.87786 | TTAAGTTTAGAAAAA TGAA CTT TTCA GGTCAATGTTTTTTT UTI89_C1466 1394965 - 1394327 - | putative repressor protein encoded within prophage CP-933O TERM 1954 1395146 - 1395130 - g 70 -3.7 -4.67904 | TAGGAACGTCAAAAA CCACA GTCAGCA TGTGG GGGGAAGAGGTTCCG UTI89_C1467 1395045 - 1395299 + | hypothetical protein UTI89_C1468 1395283 - 1395708 + | hypothetical protein TERM 1955 1396298 - 1396259 - g 70 -4.3 -4.49937 | gap 1, overlap 1396261 1396264 TCAAGAAGATCAAAA CACTATGGTCCATGGCGT AAAAA ACGCCACGAACCAG-GCA GGGGATGTTCAGACC TERM 1956 1396294 - 1396264 - g 86 -14.1 -2.97995 | overlap 1396261 1396259 AAGATCAAAACACTA TGGTCCATGGCGT AAAAA ACGCCACGAACCA GGCAGGGGATGTTCA UTI89_C1469 1395849 - 1396850 + | hypothetical protein UTI89_C1470 1396891 - 1397313 + | unknown protein encoded within prophage TERM 1957 1397381 - 1397406 + G 77 -11.3 -3.19642 | gap 1, overlap 1397376 TAGAGCTAGCGTGGT TGTCCGCT-TTG TGC CAATAGCGGACA TTGCTGGCTCATGGT UTI89_C1471 1397376 - 1398467 + | hypothetical protein UTI89_C1472 1398483 - 1399484 + | hypothetical protein UTI89_C1473 1399596 - 1399886 + | hypothetical protein TERM 1958 1400037 - 1399987 - f 100 -14.3 -4.64844 | gap 1, opp_overlap 1399998 GGCAGATAGAGAAAA GCCCCAG-TTAATATTACGCGTCC TGCA AGACGCTTAACATTAATCTGAGGC TCAATCTATGAACGG TERM 1959 1400131 - 1400116 - g 86 -9 -4.36411 | TATGAAGCAGCAAAA GGCGAT GTTA ATCGCC CTGATCGTCATCTGT UTI89_C1474 1400045 - 1400257 + | putative cell killing protein encoded within cryptic prophage CP-933M TERM 1960 1400291 - 1400260 - f 78 -10.8 -3.17229 | opp_overlap 1400260 1400262, overlap 1400258 ACCTGAGGAGTAAGA GACCCGGCGAGGGA GAAA TCCCTCGCCACCTC TGATGTGTCAGGCAT TERM 1961 1400328 - 1400341 + F 100 -9.5 -5.45813 | opp_overlap 1400328 CGCACCCGCACGTAA CCCGC TTCG GCGGG TTTTGTTTTTTCCTG TERM 1962 1400341 - 1400328 - f 71 -9.5 -3.06183 | opp_overlap 1400328 CGCACCCGCACGTAA CCCGC TTCG GCGGG TTTTGTTTTTTCCTG UTI89_C1475 1400425 - 1400703 + | hypothetical protein UTI89_C1476 1400705 - 1401751 + | hypothetical protein UTI89_C1478 1401764 - 1402138 + | endodeoxyribonuclease RusA (Holliday junction resolvase) UTI89_C1479 1402135 - 1402956 + | cryptic prophage CP-933M antitermination protein Q-like protein TERM 1963 1402990 - 1403028 + F 74 -3.8 -5.00616 | overlap 1402992 1402992 AATCTGTGGTAAATT TGCTCTAACGATGGGCGT TTT ATGCCTGACGTTAGAAGA TTTTTTACACCCCGC TERM 1964 1403039 - 1403054 + F 100 -11.8 -5.28176 | GAAGATTTTTTACAC CCCGCC GCCT GGCGGG TTTTTTATGACTGAA UTI89_C1480 1403181 - 1403378 + | hypothetical protein TERM 1965 1403365 - 1403382 + F 100 -7 -5.73978 | opp_overlap 1403364 TCGGTTGTTACAGAC GCCTTC CGCAGT GAAGGC TTTTTTATTTGTGGT TERM 1966 1403441 - 1403401 - f 73 -8.9 -3.53811 | opp_overlap 1403405, overlap 1403402 TTTATTTGTGGTAAA TGGGCGGCTGGTGGGTG TTAGGGG CACCCACCAGCCATCTG CTCATGCGTCCGGAT TERM 1967 1403440 - 1403402 - f 82 -12.4 -2.72144 | opp_overlap 1403405, overlap 1403401 TTATTTGTGGTAAAT GGGCGGCTGGTGGGTG TTAGGGG CACCCACCAGCCATCT GCTCATGCGTCCGGA TERM 1968 1403405 - 1403437 + F 100 -16.3 -2.83164 | opp_overlap 1403402 1403401 TTTGTGGTAAATGGG CGGCTGGTGGGTGTT AGG GGCACCCACCAGCCA TCTGCTCATGCGTCC TERM 1969 1404440 - 1404451 + G 74 -2.2 -5.15634 | TAGCCGTCCTGGTGA TCTG GTTG CGGA TTTTTTCATGGGGTC UTI89_C1481 1403529 - 1404578 + | putative DNA adenine methyltransferase encoded by prophage CP-933O TERM 1970 1404893 - 1404908 + F 100 -8.2 -5.83822 | CACTTATTTTCCCTG GCTCGC TTTT GCGGGC TTTTTTTTAAATGTC TERM 1971 1405114 - 1405131 + G 100 -12.7 -4.52857 | TAGCGCCACTCTCCA GCCCCTC TCCG GAGGGGC TTTTCTGTGCCGGAT UTI89_C1484 1405049 - 1405312 + | hypothetical protein TERM 1972 1405327 - 1405348 + F 100 -12.3 -4.72272 | gap 1, overlap 1405340 ACCGCTATCCTTCCA GGCCCATCCG CTC CGG-TGGGCC TTTTTACTGCAGAAA TERM 1973 1405602 - 1405617 + F 91 -10.4 -4.77165 | GATACGCGGCTTTAG CCCCTC TCCG GAGGGG TTTTCTTGTGGGCAA TERM 1974 1405659 - 1405638 - f 100 -12.3 -5.40072 | gap 1 TTGTGGGCAAAAAAA GCCCGCG-CT GGG AGACGCGGGC GGCAAGGAATAAACA TERM 1975 1405728 - 1405743 + F 72 -8.2 -3.94933 | CCCATAGTAATCACT CTGCGC AACT GCGCGG TCTTTTTCGAATTGC UTI89_C1485 1405853 - 1406080 + | hypothetical protein UTI89_C1486 1406038 - 1406199 + | hypothetical protein TERM 1976 1406285 - 1406307 + G 100 -9.9 -5.77677 | opp_overlap 1406285 GCATGAGTTATCAGA GCCATCAGT AGTTA ACTGGTGGC TTTTTTATTGTTTTC UTI89_C1487 1406244 - 1406564 + | lambdoid prophage DLP12 lysis protein S-like protein ydfR 1406569 - 1406913 + | hypothetical protein UTI89_C1489 1407151 - 1406879 - | hypothetical protein UTI89_C1490 1407257 - 1407790 + | putative phage lysozyme TERM 1977 1407880 - 1407914 + F 81 -10.8 -3.46647 | opp_overlap 1407885, overlap 1407885 TAAGTGAATAAAAGT AAAAACCCCGTTTGTT GGC ACCAAGCGGGGTTTTG TGTTTCCTGACTCCG TERM 1978 1407909 - 1407885 - f 95 -8.5 -5.17786 | opp_overlap 1407880 1407885 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGGGG TTTTGTGTTTCCTGA TERM 1979 1407885 - 1407909 + F 95 -10.7 -4.82128 | opp_overlap 1407885, overlap 1407880 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGGGG TTTTGTGTTTCCTGA UTI89_C1491 1407914 - 1408087 + | hypothetical protein UTI89_C1492 1408089 - 1408553 + | bacteriophage lambda cell lysis protein ydfO 1409286 - 1408861 - | hypothetical protein TERM 1980 1408924 - 1408937 + g 83 -5.3 -5.13722 | opp_overlap 1408924 TAATGAATTATCAAA GGTAT AGTA ATACC TTTTGTTTTCGTGGA UTI89_C1494 1409562 - 1409329 - | unknown protein encoded within prophage TERM 1981 1409765 - 1409778 + G 73 -3.7 -4.7889 | overlap 1409764 CGACAGGTTACGGGG CGGCG ACCT CGCGG TTTTTCACTATTTAT UTI89_C1495 1409710 - 1409868 + | hypothetical protein TERM 1982 1409870 - 1409924 + F 100 -14.5 -3.87323 | opp_overlap 1409870 1409871, overlap 1409871 TATTGCATTCATAAA TGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG TERM 1983 1409871 - 1409923 + F 100 -18 -2.91671 | opp_overlap 1409870 1409871, overlap 1409870 ATTGCATTCATAAAT GTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGC CTTGTATTTGATAAT TERM 1984 1410237 - 1410222 - gf 73 -6.1 -4.3739 | TACCGGCTCACAAAA GCGCA GGCAGA TGCGC AGGAACTGAAAAATG nohA2 1409949 - 1410497 + | prophage Qin DNA packaging protein NU1-like protein TERM 1985 1410899 - 1410914 + GF 73 -4 -4.74132 | gap 1, opp_overlap 1410899 AACACCGCGATAATA CGC-TCA CCC TGAAGCG TTTTTCCTCCGGTGT TERM 1986 1411053 - 1411036 - gf 70 -4.1 -4.59773 | overlap 1411038 CCGGATGTTGAAAAA GAGGGTT CGCC AACCCTG CTGGGGGATAAACGT TERM 1987 1411160 - 1411144 - gf 72 -4.4 -4.70659 | gap 1 TGCCAGATCGAAAAA GCCG-CT AACG AGTCGGC ACATTTCATGCGTTT TERM 1988 1411222 - 1411238 + GF 71 -7.9 -3.77087 | CAGTATCTGAAATTT GGCGATG ATG CCTCGCC TTTCGGTCTTAAGTG TERM 1989 1411831 - 1411813 - gf 88 -2.3 -5.5112 | overlap 1411815 GCGATCAACAAAAAA TACCGCC ATGCA GACGGAA CCGAAATGACCATTT TERM 1990 1411996 - 1411982 - gf 89 -8.5 -4.63527 | TCACCATGCCAAAAA CCCGC AATCA GCGGG GCGTGTATCTGTGCG TERM 1991 1412104 - 1412122 + GF 76 -3.8 -5.00616 | overlap 1412106 TCGTATGCCATCCGT TTTCCTGA TGA TCCGGAGA TTTTTTCGCAGACAG UTI89_C1497 1410445 - 1412397 + | putative DNA packaging protein of prophage; terminase large subunit UTI89_C1498 1412381 - 1412587 + | putative DNA packaging protein of prophage TERM 1992 1413000 - 1412968 - g 93 -10.6 -4.41494 | opp_overlap 1412965, overlap 1412970 GACGTGGAAGGAAAA CGCACGTTCACGGA ATTTA TCCGTGAAGGTGTG GGCGTTCATGCGTTT TERM 1993 1412998 - 1412970 - g 72 -11.8 -2.54166 | opp_overlap 1412965, overlap 1412968 CGTGGAAGGAAAACG CACGTTCACGGA ATTTA TCCGTGAAGGTG TGGGCGTTCATGCGT TERM 1994 1414097 - 1414078 - g 72 -4.9 -4.61231 | overlap 1414079 GCAGAGCGGGAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGCGCAGGC UTI89_C1499 1412584 - 1414176 + | putative capsid protein of prophage TERM 1995 1414226 - 1414241 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC TERM 1996 1415376 - 1415357 - g 72 -5.6 -4.58663 | gap 1, overlap 1415358 1415359 ATGACGGTGGAAAAA GCCCGCCCG ATC CTGGCGG-C TGCACCACTGGCGGA TERM 1997 1415502 - 1415465 - g 72 -4.6 -4.59773 | overlap 1415450 1415467 GCGCAGGCTGAAAAA CTGGCGGCCTGCCCGG GAATGA CCGTGGAGAACGCCCG GGCTGTGCTGGCTGC UTI89_C1500 1414166 - 1415671 + | putative capsid assembly protein of prophage TERM 1998 1416022 - 1416007 - g 91 -7.6 -5.1244 | overlap 1416013 GGATGAACACAAAAA GGCAAA TGCC TTTGCC GGCACAGCCCTGAGT UTI89_C1501 1415708 - 1416055 + | putative capsid protein small subunit of prophage CP-933O TERM 1999 1416265 - 1416255 - g 88 -8.2 -4.652 | opp_overlap 1416255, overlap 1416246 1416256 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG UTI89_C1502 1416113 - 1417141 + | putative capsid protein of prophage TERM 2000 1417147 - 1417172 + G 100 -9.7 -5.00616 | gap 1, opp_overlap 1417162, overlap 1417150 GGTGAAATAATCCGT GA-GCGGGGGCG AAA TGCCCCCGTGTC TTTTTTCACAGGAGG TERM 2001 1417150 - 1417168 + G 100 -13.8 -3.66166 | opp_overlap 1417162, overlap 1417147 GAAATAATCCGTGAG CGGGGGCG AAA TGCCCCCG TGTCTTTTTTCACAG UTI89_C1503 1417145 - 1417576 + | hypothetical protein UTI89_C1504 1417569 - 1417922 + | putative head-tail joining protein of prophage TERM 2002 1418006 - 1417994 - g 77 -6.9 -4.56597 | CCGGGTTCGTAAAAA CGCCA TTC CGGCG GCTTCAGCAATGGCC UTI89_C1505 1417938 - 1418471 + | putative minor tail protein TERM 2003 1418522 - 1418555 + G 82 -7.5 -4.56597 | gap 1, opp_overlap 1418522 1418524, overlap 1418524 CTCGAGCAGCATGAA CA-CGGGGCGAC GCTGTTTGATG GTCGCCCCGTTG TTTTTGACGAAGAGG TERM 2004 1418524 - 1418552 + G 90 -10.3 -4.40561 | opp_overlap 1418524 1418522, overlap 1418522 CGAGCAGCATGAACA CGGGGCGAC GCTGTTTGATG GTCGCCCCG TTGTTTTTGACGAAG TERM 2005 1418552 - 1418524 - g 70 -10.3 -3.18023 | opp_overlap 1418522 1418524, overlap 1418522 CGAGCAGCATGAACA CGGGGCGAC GCTGTTTGATG GTCGCCCCG TTGTTTTTGACGAAG UTI89_C1506 1418468 - 1418863 + | putative tail component of prophage UTI89_C1507 1418871 - 1419623 + | putative tail fiber component V of prophage CP-933U UTI89_C1508 1419637 - 1420068 + | putative tail component of prophage TERM 2006 1420084 - 1420119 + F 85 -13.2 -2.71364 | ACTTTGCCCTCAGAC TGGCGCGTGAGATGGG GAGA CCCGACTGGCGCGCCA TGCTTGCCGGGATGA TERM 2007 1420214 - 1420241 + G 100 -11.4 -5.44119 | gap 1 GGATATGCATTTTTC CGGGCTGACGTAC GCT GTAC-TCAGCCTG TTTTTTTGCGATCCG UTI89_C1509 1420095 - 1420508 + | putative tail component of prophage CP-933O TERM 2008 1420674 - 1420660 - g 71 -2.7 -4.82901 | CTGGCTGCACAAAAA GCCGG GATTT CCGTC GGGCAGTATAAAGCG TERM 2009 1420888 - 1420924 + G 85 -11.6 -3.64682 | gap 2 GCGGTGGCGACAGGT GCGCTGGCGTACGCCTGG TAC CAGGGCG-ACGCCA-CGC TTTCAGAATTTAATA TERM 2010 1421516 - 1421503 - g 82 -3.1 -5.252 | GAGGCGGATAAAAAA TGGCA GTGG TACCA GAGCCGGAGCCAGCG TERM 2011 1421654 - 1421641 - g 70 -3.7 -4.70659 | TCGGATATGGAAAAA GCCGG TGAA CTGGC GGCAAGGGACAGGGC TERM 2012 1421973 - 1421962 - g 70 -4.4 -4.58663 | AGGACGCTGGAAAAA CACA GCGG TGTG AATGAGAAAATCAGC TERM 2013 1422263 - 1422238 - g 72 -6.8 -4.17023 | gap 1, overlap 1422239 GCAATCAGCGCAAAA GCCCG-CGGCC TCACC GACCGTCAGGC GCAGCGGGAGTCGGA UTI89_C1510 1420489 - 1423062 + | putative tail component of prophage CP-933O TERM 2014 1423080 - 1423066 - gT 73 -6.4 -4.30576 | GGTGGACGATGAAAA CCTTCC GCT GGAAAG TGAAACCCGGGATGG UTI89_C1512 1424092 - 1423292 - | hypothetical protein UTI89_C1511 1423059 - 1423388 + | minor tail protein TERM 2015 1423537 - 1423523 - Ggf 80 -5.7 -4.94972 | GAGCAGAACGAAAAA GGTGA GCCGG TCACC TGGCAGGGGAGGCAG TERM 2016 1423699 - 1423719 + GgF 90 -9.7 -4.42653 | overlap 1423701 CGGCGGAACGGTGGT CCGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT TERM 2017 1423701 - 1423717 + GgF 74 -10.9 -2.54745 | overlap 1423699 GCGGAACGGTGGTCC GGCGTAA GGT TTACGCC CGTTTTCTGGATGCG UTI89_C1513 1423388 - 1424086 + | minor tail protein TERM 2018 1424117 - 1424101 - gfH 71 -9.5 -3.02649 | overlap 1424103 ATCCCATGACAGAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA UTI89_C1514 1424049 - 1424834 + | putative tail fiber component K of prophage UTI89_C1515 1424732 - 1425373 + | putative tail component of prophage CP-933K UTI89_C1516 1425447 - 1425785 + | hypothetical protein TERM 2019 1425811 - 1425827 + F 100 -11.5 -4.63048 | opp_overlap 1425808 TGTCGTAACTCATGA GCCGCCT TTT GGGCGGC TTTGTTGTTTATGGA TERM 2020 1426002 - 1425982 - g 90 -7.5 -4.7497 | TGGACGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CGGTGCTGGACAGTG TERM 2021 1427613 - 1427588 - g 80 -11.9 -3.30441 | GAGTATCCGTGAGAA CGATGACGGCA CGTA TGCCATCACCG CCGTGCAGCATGTAC TERM 2022 1428458 - 1428447 - g 95 -5.8 -5.45652 | ACCGTCAATAAAAAA CTGG AAGA CCAG AGTGCGGCAATCCAG TERM 2023 1428515 - 1428486 - g 70 -6.5 -4.18367 | CAGCAGATACAGAAA GTTCAGGTTGATA CAAA TAATAACCTGAAC AGCATGTGGGCCGTG UTI89_C1517 1425852 - 1429331 + | putative tail component of prophage TERM 2024 1429351 - 1429368 + F 100 -12.7 -5.4505 | opp_overlap 1429341 1429342 1429349 TATAACCCATATACG GGCGCCA GAAA TGGCGCC TTTTTTATTGCAGAA UTI89_C1518 1429399 - 1429998 + | putative membrane protein precursor TERM 2025 1430105 - 1430128 + TF 100 -10.2 -5.84381 | TTACACTGTCCTGAA GCCCGTGGCG TCAC TGCTGCGGGC TTTTTTTATTGGTGG TERM 2026 1430568 - 1430537 - gT 79 -4.5 -5.02074 | overlap 1430540 GCAGCCGCGAAAAAA TCAGCCAGC-GATGC CAGT GCATCAGCCAGC-GA GGCGGCAACTCATGC UTI89_C1520 1431396 - 1430647 - | hypothetical protein TERM 2027 1430762 - 1430733 - Gg 75 -4.9 -4.76041 | gap 1, overlap 1430734 CAGAGTCATCAAAAA GCGCGGCAGCTACC AGC GCCAG-TGCCGCGA AAACGTCAGAAACGA TERM 2028 1430990 - 1430976 - Gg 84 -7.8 -4.59853 | CGAAGGCGGCAAAAA CGTCCG AGA CGAACG CCAGGTCTTCTGAAA TERM 2029 1431299 - 1431279 - Gg 72 -4.5 -4.63542 | opp_overlap 1431283, overlap 1431280 1431281 CAGAATCCTCAAAAA CGGCTGCCG CAT CGTCCGCCA GTTCGGCGGCGTCAT UTI89_C1519 1430150 - 1433257 + | putative tail fiber protein TERM 2030 1433674 - 1433658 - g 100 -6.5 -5.80003 | overlap 1433661 GGAAGAAACAAAAAA CAACCTG ATG CAGGTAG CCAGTGAGCATATTG TERM 2031 1433671 - 1433661 - g 86 -6.8 -4.9072 | overlap 1433658 AGAAACAAAAAACAA CCTG ATG CAGG TAGCCAGTGAGCATA ynaC 1433257 - 1433841 + | phage-related tail fiber assembly protein G TERM 2032 1433846 - 1433898 + T 87 -7.8 -5.08824 | gap 1, overlap 1433848 1433856 TCAGGGAGTAATCAT TGGGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGCTA TTTTTTCCCTGAAGC TERM 2033 1433848 - 1433896 + T 76 -8.2 -4.17608 | gap 1, overlap 1433846 1433856 AGGGAGTAATCATTG GGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGC TATTTTTTCCCTGAA TERM 2034 1433856 - 1433888 + T 100 -17.2 -3.16564 | gap 1, overlap 1433848 1433846 ATCATTGGGATTATG CCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGG TTGGATGCTATTTTT UTI89_C1522 1434561 - 1433896 - | hypothetical protein UTI89_C1524 1435048 - 1434710 - | hypothetical protein ylcE 1434621 - 1434890 + | hypothetical protein UTI89_C1525 1434894 - 1435175 + | hypothetical protein TERM 2035 1435388 - 1435374 - TR 81 -3.6 -5.46698 | TGCAAAACTAAAAAA GATTTC AAT AAAATC AGACAGTTAAAAACA TERM 2036 1435639 - 1435618 - TR 100 -14.5 -4.84017 | AATTCCGCACAAAAA TGACCCCGT AATT ACGGGGTCA ATAAGGACATGGTAT yciE 1436169 - 1435663 - | hypothetical protein yciF 1436715 - 1436215 - | putative structural proteins TERM 2037 1436757 - 1436736 - R 87 -13.7 -2.94144 | opp_overlap 1436733, overlap 1436733 TCTCCAGTGAAATCA CTGCGAGCC ATAC GGCCCGCAG ATGCAATTATCTTTA TERM 2038 1436797 - 1436819 + r 76 -10 -3.32562 | overlap 1436801 ATTAATAATTAACGG TGAATCAGGA TTT TCCTGATTTA TTATCACCGCTTTGT TERM 2039 1436801 - 1436815 + r 84 -8.6 -4.30987 | overlap 1436797 ATAATTAACGGTGAA TCAGGA TTT TCCTGA TTTATTATCACCGCT yciG 1437037 - 1436801 - | hypothetical protein TERM 2040 1437354 - 1437332 - R 100 -11.2 -4.45261 | opp_overlap 1437326, overlap 1437333 TAAAGAAAGTTAAAA TGCCGCCAGC GGA ACTGGCGGCT GTGGAATTAACTGCG TERM 2041 1437353 - 1437333 - R 95 -14.7 -3.2553 | opp_overlap 1437326, overlap 1437332 AAAGAAAGTTAAAAT GCCGCCAGC GGA ACTGGCGGC TGTGGAATTAACTGC trpA 1438167 - 1437361 - | tryptophan synthase subunit alpha trpB 1439360 - 1438167 - | tryptophan synthase subunit beta TERM 2042 1439231 - 1439249 + g 82 -7.4 -4.58395 | opp_overlap 1439233, overlap 1439234 GCAGGTCGTTGAACT GAGCCTGA AAT TCAGGATC TTTTTGCGCGCTGAC trpC 1440730 - 1439372 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 2043 1439463 - 1439475 + g 86 -10.5 -3.89614 | opp_overlap 1439462 1439461 1439458 GAATTAAAATCAAGC CCGGC GCA GCCGG TTTGTGCCGCTTCCA trpD 1442329 - 1440734 - | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase TERM 2044 1440864 - 1440891 + g 71 -10.6 -2.88054 | gap 1, opp_overlap 1440848, overlap 1440861 1440861 1440863 1440889 ATGGCGACATTCGCC GCGACGGCTGCTT CGT GAGCGGC-GTCGC CTTTACCTTGTAACA TERM 2045 1441201 - 1441224 + g 78 -7.4 -4.30014 | GGTTAATTAATGGCC CCAGCACATT GAAC AGTGTGCGGG TTTTCAGTTGCTGGC TERM 2046 1441403 - 1441353 - G 77 -11.9 -3.26933 | gap 1, opp_overlap 1441371 1441399, overlap 1441351 ATATCAAGATTAATA CCG-AACGCCGCCAGCAGATCCGA CGAG CCGGATTTACTGGAGACGCTACGG TTGCCGTGTTTCGCC trpE 1443891 - 1442329 - | anthranilate synthase component I TERM 2047 1443866 - 1443876 + g 82 -3.2 -5.20783 | TTGCAGGTTAGCAGT TCGA GAG TCGG TTTTTGTGTTTGCAT TERM 2048 1443939 - 1443921 - H 100 -8.8 -5.75342 | TTTGTTCAAAAAAAA GCCCGC TCATTAG GCGGGC TGGGTATCTGATTGC trpH 1444165 - 1445046 + | putative enzyme TERM 2049 1445102 - 1445085 - gf 70 -9.1 -3.17219 | GATAACCCGCAGCAA CGCCTGA TCAA CCAGGCG GTGGAGATCGTGCGT yciO 1445007 - 1445663 + | hypothetical protein TERM 2050 1445800 - 1445765 - g 100 -10.6 -4.62783 | gap 1, opp_overlap 1445765 1445768 1445768, overlap 1445767 1445768 GAGTTATGCGAAAAA CACGGAGATCCCTTCTT ATG AAGAAGGGATCT-CGCT CTTTGATGTTGAAGC TERM 2051 1445765 - 1445801 + G 78 -9.5 -3.92324 | opp_overlap 1445765 1445767 1445768, overlap 1445768 1445768 GAGTTATGCGAAAAA CACGGAGATCCCTTCTT ATG AAGAAGGGATCTCGCTC TTTGATGTTGAAGCC TERM 2052 1445798 - 1445767 - g 100 -15.4 -3.92746 | gap 1, opp_overlap 1445765 1445768 1445768, overlap 1445765 1445768 GTTATGCGAAAAACA CGGAGATCCCTTCTT ATG AAGAAGGGATCT-CG CTCTTTGATGTTGAA TERM 2053 1445768 - 1445798 + G 95 -15.6 -2.72568 | opp_overlap 1445767 1445765 1445768, overlap 1445765 1445768 TTATGCGAAAAACAC GGAGATCCCTTCTT ATG AAGAAGGGATCTCG CTCTTTGATGTTGAA TERM 2054 1445768 - 1445799 + G 100 -15.4 -3.55084 | gap 1, opp_overlap 1445767 1445765 1445768, overlap 1445768 1445765 TTATGCGAAAAACAC G-GAGATCCCTTCTT ATG AAGAAGGGATCTCGC TCTTTGATGTTGAAG TERM 2055 1445798 - 1445768 - g 95 -15.6 -2.95166 | opp_overlap 1445768 1445768 1445765, overlap 1445767 1445765 TTATGCGAAAAACAC GGAGATCCCTTCTT ATG AAGAAGGGATCTCG CTCTTTGATGTTGAA yciQ 1445688 - 1447586 + | hypothetical protein TERM 2056 1447719 - 1447743 + F 72 -8.7 -3.61398 | AGACTTTACTATCAG TGAGTCAGA TGTAAGT TCTGACTCA TTGTTGCACAAAAGC yciL 1447799 - 1448674 + | 23S rRNA pseudouridylate synthase B TERM 2057 1448683 - 1448703 + T 89 -8.3 -4.62872 | opp_overlap 1448680 1448683 CGGTTAATCAAAGTA TGCCGGA CGTCATA TCCGGCA TTTTTACAGATTAGT btuR 1449304 - 1448714 - | cob(I)yrinic acid a,c-diamide adenosyltransferase yciK 1450059 - 1449301 - | short chain dehydrogenase TERM 2058 1450399 - 1450387 - g 82 -9.1 -4.2528 | GCTCAACGTAATAAA CGCCA GCG TGGCG AGTTACGAGTCAACA sohB 1450279 - 1451328 + | putative periplasmic protease TERM 2059 1451356 - 1451337 - Tf 93 -10.7 -4.46775 | opp_overlap 1451337 GATGTAAAAGACAAA CGCGAGG ATAAGA CCTCGCG TTTTGCTTTAATCAA TERM 2060 1451337 - 1451356 + TF 93 -10.7 -4.58773 | opp_overlap 1451337 GATGTAAAAGACAAA CGCGAGG ATAAGA CCTCGCG TTTTGCTTTAATCAA yciN 1451615 - 1451364 - | hypothetical protein UTI89_C1542 1451608 - 1451763 + | hypothetical protein TERM 2061 1452143 - 1452132 - g 72 -4.4 -4.62471 | CTCAACTGCCAAAAA GAGT GCCG ACTC TACCTCCACCAAGAC TERM 2062 1452799 - 1452784 - g 74 -6 -4.56775 | AGTCTGCTGGAAAAA GCGCGC TACA GCGTGC TGGAACGTGAAGACA TERM 2063 1452916 - 1452905 - g 90 -4.4 -5.40072 | TTGGCGTGAAAAAAA CCAT GATG ATGG CTCAGCGTTTGTATG topA 1451953 - 1454592 + | DNA topoisomerase I TERM 2064 1454616 - 1454648 + F 80 -10.8 -3.29121 | gap 1, opp_overlap 1454624, overlap 1454624 TCTGTCTGGTTTTTA TAAACAAAGGGTCGC GAAA GCGGCCCTTT-TTTA TTGCATATTATTTTT TERM 2065 1454624 - 1454641 + F 100 -10.5 -5.49234 | opp_overlap 1454624, overlap 1454616 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT TERM 2066 1454641 - 1454624 - f 87 -8.3 -4.55295 | opp_overlap 1454624 1454616 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT cysB 1454802 - 1455776 + | transcriptional regulator CysB TERM 2067 1455790 - 1455823 + F 72 -9.7 -3.25809 | overlap 1455787 AATTTCTTGCGTTAT TTTCGGCACCTTT TATGTAGC GAAGGTGCCGGAA TATATTCTCCTTTGT UTI89_C1545 1456071 - 1456235 + | hypothetical protein UTI89_C1546 1456217 - 1456405 + | hypothetical protein TERM 2068 1457128 - 1457167 + G 75 -7.3 -4.32034 | gap 2, overlap 1457127 TTAACCCACTCTCAC CGGTCGACCTGGTCATTGA CCAC TCGGTGACC-G-TCGATCG TTTTGGTGATGATGA TERM 2069 1458426 - 1458400 - g 70 -7.3 -4.07687 | gap 2, opp_overlap 1458400 1458417 ATCCGCTGGTTAAAA CCAACTGGCTGGC CTC GCC-GCC-GCTGG TGGTTGCCTATGCGC TERM 2070 1459058 - 1459048 - g 72 -8.2 -3.82433 | opp_overlap 1459047, overlap 1459038 ATAAGCAGGAGCAAA CGCC GCT GGCG GTGATTGCCGGGAAA acnA 1456764 - 1459439 + | aconitate hydratase TERM 2071 1459446 - 1459480 + T 77 -11.6 -2.52896 | opp_overlap 1459443 TTGAAGTAACGAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TCAATTACACAATGC TERM 2072 1459499 - 1459525 + T 77 -6.6 -4.44974 | opp_overlap 1459500, overlap 1459500 1459524 ATTACACAATGCAAG AGGGTTATTTGT TCA GCAAATGACCCA TTTTCTCGGCTTTGG TERM 2073 1459500 - 1459524 + T 74 -10.1 -3.26262 | opp_overlap 1459500, overlap 1459499 TTACACAATGCAAGA GGGTTATTTGT TCA GCAAATGACCC ATTTTCTCGGCTTTG ribA 1460156 - 1459503 - | GTP cyclohydrolase II pgpB 1460263 - 1461027 + | phosphatidylglycerophosphatase B yciS 1461176 - 1461484 + | hypothetical protein TERM 2074 1462298 - 1462284 - g 70 -7.1 -4.08945 | AGCAGTTGGGTAAAA CTGCC GAATG GGCAG AATTCCTGCAGCGCG yciM 1461491 - 1462660 + | hypothetical protein pyrF 1462851 - 1463588 + | orotidine 5'-phosphate decarboxylase yciH 1463588 - 1463914 + | translation initiation factor Sui1 TERM 2075 1463923 - 1463942 + TF 100 -13.6 -3.71687 | opp_overlap 1463923, overlap 1463916 CGGCTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC TERM 2076 1463942 - 1463923 - Tf 100 -13.6 -5.0916 | opp_overlap 1463916 1463923 CGGCTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC osmB 1464258 - 1464040 - | lipoprotein UTI89_C1554 1463938 - 1464090 + | hypothetical protein UTI89_C1556 1465276 - 1464527 - | putative DEOR-type transcriptional regulator UTI89_C1557 1465539 - 1465366 - | hypothetical protein yciR 1467672 - 1465687 - | RNase II stability modulator TERM 2077 1467895 - 1467871 - R 100 -13.6 -4.42062 | GAGCGGGGAAATAAA CGGCCCATCC ATGAG GAATGGGCCG TGAAAGGAGATTACG rnb 1469840 - 1467906 - | exoribonuclease II TERM 2078 1468091 - 1468080 - G 72 -7.2 -4.15222 | opp_overlap 1468079 1468080 AGGTGCTGGAATAAA GGCG ATAG CGCC GTTATCAACCAAACG TERM 2079 1469546 - 1469559 + g 72 -4.5 -4.62336 | opp_overlap 1469546 GATGATCAGGAACGA TGGCC AGAC GGTCA TTTTTGCCCTGAACT yciW 1471113 - 1469908 - | hypothetical protein TERM 2080 1470544 - 1470533 - G 75 -4.4 -4.75309 | opp_overlap 1470533 TGAAAGCCAATAAAA CCAA TGAT TTGG TTAATGATCACACAG TERM 2081 1471160 - 1471140 - R 95 -12.5 -3.71149 | opp_overlap 1471137 1471140, overlap 1471141 GTATAACAGAGATAA CGGGCGGCA GAA CGCCGCCCA ATATTTACCAACAGA TERM 2082 1471159 - 1471141 - R 86 -13.8 -2.81966 | opp_overlap 1471140 1471137, overlap 1471140 TATAACAGAGATAAC GGGCGGCA GAA CGCCGCCC AATATTTACCAACAG fabI 1471968 - 1471180 - | enoyl-(acyl carrier protein) reductase TERM 2083 1472420 - 1472403 - g 75 -4.9 -4.8269 | TATAATCAGCAAAAA TGAGAAC GATC ATTCTCA CCAAGTGATAGGCCA UTI89_C1562 1472347 - 1473012 + | putative transcriptional repressor TERM 2084 1473033 - 1473050 + F 91 -11.3 -4.0825 | opp_overlap 1473032 1473031 1473029 GAATTAACCAATAGC GGGGGAT ATTA ATCCCCC TTATTTCATTGCGAA UTI89_C1563 1473128 - 1474282 + | acriflavine resistance protein A precursor TERM 2085 1475600 - 1475626 + G 74 -10.8 -3.22102 | opp_overlap 1475585, overlap 1475598 1475603 CAATGGGCGAGATTT CTGGCGCACTGG TTG CCATTGCGCTGG TGTTGTCAGCCGTAT TERM 2086 1475603 - 1475623 + G 70 -11.1 -2.80074 | opp_overlap 1475585, overlap 1475600 1475598 TGGGCGAGATTTCTG GCGCACTGG TTG CCATTGCGC TGGTGTTGTCAGCCG TERM 2087 1475944 - 1475954 + G 72 -6.8 -4.16016 | CTGATGATGTGGAAG CTGC CGG GCAG TTTCTTACCCACTGA UTI89_C1564 1474282 - 1477389 + | acriflavine resistance protein B UTI89_C1565 1477393 - 1478766 + | putative outer membrane channel protein UTI89_C1566 1478775 - 1479938 + | putative membrane transport protein TERM 2088 1479986 - 1479935 - T 77 -6.6 -4.50661 | gap 1, overlap 1479939 1479943 AATCGACAACCAAAA GTAATGAACACCTCATCCTGA-GGG GGG CCTGTCAGGATGAGGTGCAAAACAC TAACGGTCCTTACGC TERM 2089 1479982 - 1479939 - T 71 -8.2 -3.77325 | gap 1, overlap 1479935 1479943 GACAACCAAAAGTAA TGAACACCTCATCCTGA-GGG GGG CCTGTCAGGATGAGGTGCAAA ACACTAACGGTCCTT TERM 2090 1479978 - 1479943 - T 100 -15.6 -3.54779 | gap 1, overlap 1479939 1479935 ACCAAAAGTAATGAA CACCTCATCCTGA-GGG GGG CCTGTCAGGATGAGGTG CAAAACACTAACGGT sapF 1480792 - 1479986 - | peptide transport system ATP-binding protein sapF TERM 2091 1480735 - 1480752 + g 77 -6.9 -4.45664 | opp_overlap 1480730 1480733 GACGACGAAACCAGC CGGTCCG GTAG CGGAACG TTTTACTTAAATTGC sapD 1481786 - 1480794 - | putative ATP-binding protein of peptide transport system sapC 1482676 - 1481786 - | peptide transport system permease protein SapC TERM 2092 1482392 - 1482371 - G 86 -10.9 -3.96892 | gap 1 AAGCGTCACCACAAA TGCGCC-ACC TAC GGTTGGCGCA GCTCCGCTCAGTAAA TERM 2093 1482614 - 1482647 + g 91 -10.9 -4.26188 | gap 1, opp_overlap 1482613 GTCACTATAAAATTT GCGCCAGGC-GGTACG CAG CGTGCCCGGCGGGCGC TTTTCGCTGTATACG sapB 1483628 - 1482663 - | peptide transport system permease protein SapB sapA 1485268 - 1483625 - | peptide transport periplasmic protein SapA precursor TERM 2094 1484062 - 1484082 + g 76 -7.6 -4.1899 | gap 1 CAACCTGTGCCATAT CCGCCTGAA TCAG TTC-GGCGG TTTTCAGTGGACTGG TERM 2095 1485176 - 1485165 - G 70 -3.6 -4.68545 | overlap 1485158 ACGCAATAGACAAAA CCGC TGTC ACGG ATATCAGCATGCGGG ymjA 1485826 - 1485581 - | hypothetical protein TERM 2096 1485903 - 1485959 + r 100 -14.1 -3.29324 | opp_overlap 1485910 1485941 TCATACATATTTTTA TAGTT-AATGGCGCGGTGCATTACCCT CAGGC AGGATAATGCGCCGCG-CATTCGACTA TTACGTTTCGCTCAC TERM 2097 1485951 - 1485910 - R 89 -14.6 -3.12668 | gap 1, opp_overlap 1485903, overlap 1485941 TATTTTTATAGTTAA TGGCGCGGTGCATTACCCT CAGGC AGGATAATGCGCCGCG-CA TTCGACTATTACGTT pspF 1487230 - 1486253 - | phage shock protein operon transcriptional activator TERM 2098 1486352 - 1486366 + g 93 -8.6 -4.77438 | opp_overlap 1486351 1486354 CCCCTGTTGCAAACT GAGTTG CAG CAACTC TTTTTCCTGCTGCAT TERM 2099 1487979 - 1487969 - g 82 -3.2 -5.27335 | opp_overlap 1487972 TTCGGTAAACAAAAA TCGC TGG ACGA TCAGTTTGCCGAACT pspA 1487396 - 1488064 + | phage shock protein PspA pspB 1488118 - 1488342 + | phage shock protein B pspC 1488342 - 1488701 + | DNA-binding transcriptional activator PspC pspD 1488710 - 1488931 + | peripheral inner membrane phage-shock protein pspE 1489006 - 1489320 + | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 2100 1489337 - 1489352 + TF 100 -11.8 -5.36441 | AGAATTCACCATGAG CGGCGC TTAT GCGCCG TTTTTTCTGTCACAC TERM 2101 1490749 - 1490760 + GT 81 -5.8 -4.75309 | GTGCCAGGTTTATTC TCGC CCAT GCGA TTTTGTTAAGTTTCC UTI89_C1580 1491224 - 1491024 - | hypothetical protein ycjM 1489503 - 1491209 + | putative sucrose phosphorylase TERM 2102 1492271 - 1492255 - gH 76 -7.9 -4.15044 | CTGCCGGTGAACAAA GCGGTGG TGA CTACCGC CACCTGGAAAGACAA ycjN 1491223 - 1492515 + | putative ABC transporter periplasmic binding protein ycjN precursor ycjO 1492536 - 1493417 + | putative binding-protein dependent transport protein TERM 2103 1493927 - 1493891 - g 88 -10.9 -4.11216 | TGTTTATGCTGAAAA GCTACTTCGACACCATC CCT GATGAGATCGAAGAAGC GGCGATGATGGATGG ycjP 1493404 - 1494246 + | ABC transporter permease ycjQ 1494277 - 1495329 + | zinc-type alcohol dehydrogenase-like protein YcjQ TERM 2104 1495510 - 1495499 - g 77 -7.2 -4.58308 | CAGCAATCAAAGAAA CCGG TTTA CCGG TGACCACCGCCTGCG ycjR 1495339 - 1496136 + | putative transient receptor potential locus TERM 2105 1496256 - 1496278 + G 100 -15.6 -3.53012 | opp_overlap 1496247 CAATGATCTGGAACT GGTGGCTGTC TGT GACAGCCGCC TTTCCCAGGCGCAGG ycjS 1496146 - 1497201 + | oxidoreductase YcjS ycjT 1497198 - 1499465 + | transport protein YcjT ycjU 1499462 - 1500121 + | putative beta-phosphoglucomutase TERM 2106 1501008 - 1500984 - g 79 -12.1 -3.09671 | ATCGTAATGGGAATA CGCCCGGAAGA TAT TCATCCGGACG CGCAAGAGGAAAATA ycjV 1500135 - 1501217 + | ABC transporter ATP-binding protein ompG 1501211 - 1502167 + | outer membrane protein G precursor TERM 2107 1502212 - 1502181 - T 74 -10.8 -2.74799 | opp_overlap 1502181, overlap 1502180 GATAATGTGCTAAAT TGCCGGATGCGGGG CGAG CGCCAAATCCGGCA TACATTTATTTCAAC ycjW 1503216 - 1502218 - | transcriptional regulator YcjW TERM 2108 1502337 - 1502351 + g 77 -11.4 -3.25823 | overlap 1502345 TCGGAACATCGATGC CGCCTG GTG CAGGCG TTAATATAAACGACA TERM 2109 1502993 - 1502983 - G 75 -4.6 -4.84017 | AACTTCCGAGAAAAA CGGA TTA CCCG CCGTAGTTTTGGTCG ycjX 1503300 - 1504769 + | hypothetical protein ycjF 1504766 - 1505827 + | hypothetical protein tyrR 1505948 - 1507516 + | DNA-binding transcriptional regulator TyrR TERM 2110 1507565 - 1507511 - T 83 -11.1 -3.63862 | gap 2, opp_overlap 1507513 1507519, overlap 1507517 1507526 CAGAAGAAGAACGAA GAGTAAGCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATT-A-ACTTATGC TTTCAGTACAGCCAG TERM 2111 1507513 - 1507565 + T 100 -16.5 -3.64703 | opp_overlap 1507511 1507517 1507526, overlap 1507519 GAAGAAGAACGAAGA GTAAGCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTTATGC TTTCAGTACAGCCAG TERM 2112 1507561 - 1507517 - T 100 -15.9 -3.4382 | opp_overlap 1507513 1507519, overlap 1507511 1507526 AAGAACGAAGAGTAA GCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTT ATGCTTTCAGTACAG TERM 2113 1507519 - 1507559 + T 100 -22.9 -3.61609 | opp_overlap 1507517 1507511 1507526, overlap 1507513 GAACGAAGAGTAAGC GTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAC TTATGCTTTCAGTAC TERM 2114 1507552 - 1507526 - T 100 -19.6 -3.06737 | opp_overlap 1507519 1507513, overlap 1507517 1507511 GAGTAAGCGTGAATA TGCCTGATGGTG CAA CACCATCAGGCA TATTAACTTATGCTT tpx 1508066 - 1507560 - | thiol peroxidase TERM 2115 1508441 - 1508398 - g 70 -6.7 -4.1347 | gap 1, opp_overlap 1508434 1508435 CCGCAATTAGAGAAA GGGCTGACACGGGAGGAGTT GCAAA AAATCCTCCC-TGCCGGCGC AGCACGTAATGCGCT ycjG 1508185 - 1509150 + | hypothetical protein ycjI 1509913 - 1509125 - | murein peptide amidase A TERM 2116 1509834 - 1509819 - G 73 -11.8 -2.71712 | overlap 1509818 GTTCCGGGCGGAAAT GCGCCG CGTT CGGCGC GTGGGCGAGTTACGG TERM 2117 1509904 - 1509917 + g 75 -5.3 -4.63932 | TTGTGCAAATTTTGC GGATT ATCA AATCC TTTTCTTCAACGCTA TERM 2118 1510124 - 1510100 - R 100 -13.7 -4.22591 | AATAAGTTTAATAAA TCGTACTGCAC ATA GTACAGTACGA TGGTAGCTATATAAT UTI89_C1598 1510782 - 1510144 - | hypothetical protein UTI89_C1599 1511785 - 1510853 - | hypothetical protein UTI89_C1600 1511911 - 1512810 + | transcriptional regulator YcjZ TERM 2119 1513386 - 1513372 - g 70 -7.1 -4.11884 | AATCAGAACGAGAAA GGGGA GATTG TCCCC GGCGTTGCGACTCAG TERM 2120 1514152 - 1514142 - g 70 -6.8 -4.09685 | opp_overlap 1514141 1514142 GGGGACGGGCGAAAA GCCA GCG TGGC ATTTTACACCAGATG mppA 1513126 - 1514760 + | periplasmic murein peptide-binding protein precursor TERM 2121 1514772 - 1514799 + T 87 -14.2 -2.74525 | overlap 1514767 1514769 TTAATGTGATGGGAA CTGGCGTTACCC TTGT GGATAACGCCAG TGATGTCTGATTTAG ynaI 1515842 - 1514811 - | hypothetical protein ynaJ 1516086 - 1516343 + | hypothetical protein TERM 2122 1516373 - 1516352 - T 100 -10.1 -5.30155 | opp_overlap 1516354, overlap 1516354 GCAGTAAGTAAAAAA TAGGCCCGA TAAC TCGGGCCTT GTCAGTTATTGAAGA TERM 2123 1516354 - 1516371 + T 93 -12.7 -3.47751 | opp_overlap 1516354 1516352 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA TERM 2124 1516371 - 1516354 - T 100 -12.7 -4.27681 | opp_overlap 1516354, overlap 1516352 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA ydaA 1517343 - 1516393 - | universal stress protein UspE TERM 2125 1517473 - 1517425 - R 95 -14.2 -3.23638 | opp_overlap 1517421 TGAAACAGTGATGAA CCTTCTGTCAGATCAATAAATC AGAAA AATTTAATGATATGACAGAAGG ATAGTGAGTTATGCG fnr 1518247 - 1517495 - | fumarate/nitrate reduction transcriptional regulator TERM 2126 1518394 - 1518377 - R 78 -8.5 -4.14739 | opp_overlap 1518374 1518377 CTATCTATTTGAAAA CCCTTAA GTTG TTAAGGG TGACTTTACATAAAA ogt 1518957 - 1518442 - | O-6-alkylguanine-DNA:cysteine-protein methyltransferase UTI89_C1607 1519159 - 1518968 - | hypothetical protein TERM 2127 1519360 - 1519332 - R 100 -10.3 -5.9003 | AAATGAATAAAAAAA TAGAGCCTGTCGA CAT CCGCCAGACTCTA CAGTACACACAGCAG UTI89_C1608 1520304 - 1519489 - | hypothetical protein TERM 2128 1521313 - 1521303 - g 77 -6.8 -4.53303 | opp_overlap 1521303 1521302 GATTCCGATAGAAAA TGCC ACT GGCA ATTTCACCAAAATTG UTI89_C1609 1520401 - 1521429 + | putative secretion protein TERM 2129 1521576 - 1521559 - g 74 -7.7 -4.01603 | opp_overlap 1521563 CAGGTAAAGACGAAA TGGCCTG GCTT CAGACCA GCTATTTAATTGCCG UTI89_C1610 1521426 - 1522940 + | transporter ydaL 1523135 - 1523698 + | hypothetical protein ydaM 1525011 - 1523719 - | hypothetical protein TERM 2130 1524582 - 1524553 - G 82 -2.9 -5.28176 | gap 1, opp_overlap 1524553, overlap 1524554 1524555 GTTAGTCAGAAAAAA GCGCGCATAAAAAC CTT GTTTTT-TGCGCTG ATAATTTGCCGAGCG zntB 1525206 - 1526189 + | zinc transporter TERM 2131 1526379 - 1526398 + F 100 -10 -5.85178 | ATTGATTCGTACGAC GCCGACTT TGAT GAGTCGGC TTTTTTTTGCCTGTT dbpA 1526667 - 1528040 + | ATP-dependent RNA helicase DbpA TERM 2132 1528158 - 1528135 - T 89 -14.6 -2.80074 | opp_overlap 1528132 1528124, overlap 1528132 1528130 GCCTCCATAAGAGTA GCCCGATACG CTTG CGCATCGGGC GCTATCCTGGTTATT ydaO 1529104 - 1528169 - | C32 tRNA thiolase TERM 2133 1528849 - 1528861 + g 84 -10.5 -3.71672 | CGGGCAGAACGTGTT CCGGG AAG CCCGG TTGCTTTTGATCGAG TERM 2134 1529034 - 1529044 + g 74 -2.4 -5.0809 | GCTTCGCCCACGTTA CGAC GCA GACG TTTTTGTAATTTGTT UTI89_C1616 1529464 - 1529156 - | hypothetical protein TERM 2135 1530292 - 1530314 + r 81 -3.4 -5.4659 | overlap 1530293 1530294 ATTGATGTTTGGTCA TGCCAATGCA CTA TGTATTGGGG TTTTTATTTCTATTA TERM 2136 1531002 - 1530988 - R 71 -4.3 -4.59853 | TTAATGTGGCAAAAA TGGTA GGCGA TACCA TGCAGAGTAAACCGT TERM 2137 1531108 - 1531089 - R 71 -2.1 -5.03747 | opp_overlap 1531090, overlap 1531090 AAATTCCTGAAAAAA CGATACC TATAAT GGTATCT TTCTTTATGATGCTA TERM 2138 1531090 - 1531107 + r 74 -5.6 -4.59944 | opp_overlap 1531090 1531089 AATTCCTGAAAAAAC GATACC TATAAT GGTATC TTTCTTTATGATGCT TERM 2139 1531226 - 1531203 - R 74 -9.6 -3.39327 | GCGGCATACCTATAA TCCAGGCATA GAAC TATGCCAGGA AACATTGCGTGGTTC TERM 2140 1531423 - 1531404 - R 100 -10.7 -5.13137 | opp_overlap 1531403 1531404 GAAATAAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA TERM 2141 1531404 - 1531423 + r 74 -10.7 -2.55351 | opp_overlap 1531404, overlap 1531403 GAAATAAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA ynaF 1531937 - 1531431 - | hypothetical protein TERM 2142 1531997 - 1531979 - R 93 -10.2 -4.91459 | overlap 1531969 GAATAGGCAGAAAAA GCCCGCCA AAA CAGCGGGC AGGGGGATTTAGAAC ompN 1533139 - 1532006 - | outer membrane protein N precursor TERM 2143 1533473 - 1533444 - R 70 -7.1 -3.97043 | opp_overlap 1533449, overlap 1533449 TCCAACACATAAGAA GACAAGCCCGAAC AGTC GTCCGGGCTTTTT TTTAGAATTGGATAA TERM 2144 1533468 - 1533449 - R 91 -11.4 -3.88971 | opp_overlap 1533449, overlap 1533444 CACATAAGAAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTAGAATTG TERM 2145 1533449 - 1533468 + r 100 -9.2 -5.81032 | opp_overlap 1533449 1533444 CACATAAGAAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTAGAATTG ydbK 1537029 - 1533505 - | pyruvate-flavodoxin oxidoreductase TERM 2146 1535349 - 1535336 - G 77 -3.1 -5.1287 | overlap 1535337 GTCAGATGGAAAAAA GCCAT CTGC ATGAC GGTATTAATACGGGC TERM 2147 1535379 - 1535398 + g 70 -10 -3.16564 | gap 1 CCGCCAGGCCACATT CGCGGGCGA TTT TCGCC-GCG TTAATCACATAGAAG TERM 2148 1536033 - 1536045 + g 70 -6.9 -4.13903 | GATAGAGCGGTTCTG CCTGG GCA CCGGG TTCTTTGGTTCTGTC UTI89_C1620 1537435 - 1537100 - | hypothetical protein TERM 2149 1537222 - 1537207 - GH 87 -4.6 -5.27769 | opp_overlap 1537212 ATAAAAAAGTAAAAA TGCGGG GCAA CGCGCA GGACAGCTCTCGACG UTI89_C1621 1537303 - 1537569 + | hypothetical protein hslJ 1538000 - 1537566 - | heat-inducible protein TERM 2150 1538091 - 1538069 - R 87 -11.3 -3.66018 | GGATTATCTGAATAA GCTCCCCTG GAATG CAGGAGAGC GGCAAGATTAAACCA ldhA 1539088 - 1538099 - | D-lactate dehydrogenase TERM 2151 1538866 - 1538891 + g 84 -7.5 -4.66953 | overlap 1538864 TGAAACCGGCACAGC GCAAGGCGATA TATT TAACGCCGTGC TTTTTCAGCTCTTCC TERM 2152 1540295 - 1540270 - g 89 -13.3 -3.39862 | ATTAAGCATGGATAA CAGCCAGCTGC CTCT GCAGCTGACCG GTGAAGCGAAACAGG TERM 2153 1541629 - 1541614 - g 74 -10.4 -3.51934 | overlap 1541612 GCGGCTGGATAAAGA CACCGC AGAT GCGGTG GTGAAAGACAATATG ydbH 1539296 - 1541935 + | hypothetical protein ynbE 1541932 - 1542117 + | hypothetical protein ydbL 1542092 - 1542451 + | hypothetical protein TERM 2154 1542777 - 1542798 + F 76 -8 -4.21773 | opp_overlap 1542776 TTTAAATAATCAATT GGTCGGGT CAGGGT ATCCGACC TTCTTTATATTCGCC TERM 2155 1542924 - 1542912 - g 70 -5.5 -4.43283 | overlap 1542913 TTACAGAAATAGAAA CCACC ACA GGTGA AAAGAAAAATACCAA TERM 2156 1543116 - 1543096 - g 86 -10.5 -3.92625 | CATAGTGGAACTAAA CGACGATGA TGA TCATCATCG CAATAATTCTCCACT TERM 2157 1543536 - 1543524 - g 75 -5.5 -4.67556 | overlap 1543528 ACAACACTGGAAAAA CCATC GTC GACGG CAAAGGCGCCACCGG TERM 2158 1544560 - 1544546 - g 70 -5.6 -4.30987 | overlap 1544548 ACGGTGGATAACAAA GGCGGT ATG ACCGTC ACCGATCCGGACTCC TERM 2159 1545064 - 1545044 - g 81 -9.7 -3.91473 | overlap 1545034 1545058 ATAAACGGTGACAAA GCCATCGTC AAC AACGACGGC GACAGCACGATCCTT TERM 2160 1547237 - 1547223 - g 77 -8.5 -4.06185 | opp_overlap 1547223 1547218 TAGATAAAGATCAAA CCGCG ACTAA CGCGG TAGATTATTTTTACG entS 1542827 - 1551142 + | EntS/YbdA MFS transporter TERM 2161 1551188 - 1551165 - f 95 -11.8 -4.21811 | gap 1, opp_overlap 1551165 CATGTAATACATAAA CCGCAACGCTG ATA CAG-GTTGCGG TTTTTTTATTGCCGG TERM 2162 1551165 - 1551188 + F 100 -11.8 -5.7946 | gap 1, opp_overlap 1551165 CATGTAATACATAAA CCGCAACGCTG ATA CAG-GTTGCGG TTTTTTTATTGCCGG UTI89_C1628 1551362 - 1552222 + | putative oxidoreductase TERM 2163 1552227 - 1552262 + T 83 -6.3 -5.15634 | opp_overlap 1552227 1552229 1552231 1552236, overlap 1552231 1552236 CGCGAGAATAACGAA TATACAAAAGGGAAA GATGCA TTTCCCTTTTGTTTC TTTTTTAATGGCATG TERM 2164 1552260 - 1552229 - T 71 -8.9 -3.36276 | opp_overlap 1552227 1552231 1552236, overlap 1552227 1552231 1552236 CGAGAATAACGAATA TACAAAAGGGAAA GATGCA TTTCCCTTTTGTT TCTTTTTTAATGGCA TERM 2165 1552258 - 1552231 - T 81 -11.5 -3.23854 | opp_overlap 1552227 1552231 1552236, overlap 1552229 1552227 1552236 AGAATAACGAATATA CAAAAGGGAAA GATGCA TTTCCCTTTTG TTTCTTTTTTAATGG TERM 2166 1552231 - 1552258 + T 100 -11.5 -5.0917 | opp_overlap 1552231 1552229 1552227 1552236, overlap 1552227 1552236 AGAATAACGAATATA CAAAAGGGAAA GATGCA TTTCCCTTTTG TTTCTTTTTTAATGG TERM 2167 1552253 - 1552236 - T 74 -5.6 -4.70453 | opp_overlap 1552231 1552227 1552236, overlap 1552231 1552229 1552227 AACGAATATACAAAA GGGAAA GATGCA TTTCCC TTTTGTTTCTTTTTT TERM 2168 1552236 - 1552253 + T 87 -5.6 -5.3472 | opp_overlap 1552236 1552231 1552229 1552227, overlap 1552231 1552227 AACGAATATACAAAA GGGAAA GATGCA TTTCCC TTTTGTTTCTTTTTT UTI89_C1629 1552491 - 1552267 - | hypothetical protein TERM 2169 1552694 - 1552704 + G 71 -2.4 -4.89852 | CCTCTTTTTGCTATT GCCC ATC GTGC TTTTTATCCGTATGA ynbA 1552521 - 1553126 + | hypothetical protein TERM 2170 1553977 - 1553989 + G 100 -3.3 -6.17669 | TGACTCATTAATTTT CACCG CTC CGGTA TTTTTTTATTTTATT ynbB 1553126 - 1554022 + | putative phosphatidate cytidiltransferase TERM 2171 1554215 - 1554203 - gf 70 -9.1 -3.15249 | opp_overlap 1554200 1554200 CATATCGTTGATGAA CTGGC GAT GCCAG ATACTGCTTTTTATG TERM 2172 1554932 - 1554959 + GF 76 -8.4 -3.96148 | gap 1, opp_overlap 1554925 1554935 CATGAAGACCGCACA GGA-CCATCAGCG GAT CGCTGGCGGCTCC TTTCTGGTGGACCCG ynbC 1554038 - 1555795 + | putative methylase ynbD 1555710 - 1557101 + | putative enzyme YnbD acpD 1557760 - 1557155 - | azoreductase TERM 2173 1557956 - 1557930 - H 74 -3.1 -5.10933 | gap 1, overlap 1557937 TCATTTAAAAGAAAA TTAATCAGGCAG ACTA CTGCCC-ACTAA CGTTATGACAGAACA TERM 2174 1559614 - 1559593 - g 71 -2.9 -4.7373 | overlap 1559595 GCATCGGACGAAAAA CATCGTCGC TTCC ACGACAAAG AGTCTGACTTCCTCG TERM 2175 1559688 - 1559670 - g 75 -6.7 -4.30576 | opp_overlap 1559670 TGGCGAGCAGCAAAA GGCGCTT TCTTC AAACGCC TTCCGTCGCCTGTGC TERM 2176 1561803 - 1561831 + G 70 -6.8 -4.08216 | gap 1, overlap 1561805 CGCTCAACAACTTGG CACGCCTTATCCG ATTT CGGATAAG-CGTA TTTTGCAGGCGATGG TERM 2177 1561805 - 1561829 + G 73 -9.4 -3.63922 | gap 1, overlap 1561803 CTCAACAACTTGGCA CGCCTTATCCG ATTT CGGATAAG-CG TATTTTGCAGGCGAT hrpA 1558018 - 1561863 + | ATP-dependent RNA helicase HrpA ydcF 1562136 - 1562936 + | hypothetical protein TERM 2178 1562976 - 1562940 - f 74 -5.8 -4.62069 | opp_overlap 1562941, overlap 1562941 TCGTTACGTTAAAAA TTGCCCGTTCGTGAAC CAATT GTTTGCAAACGGGCAT GACTTCTGACTTTTA TERM 2179 1562941 - 1562975 + F 77 -11.5 -2.62718 | opp_overlap 1562940 1562941 CGTTACGTTAAAAAT TGCCCGTTCGTGAAC CAATT GTTTGCAAACGGGCA TGACTTCTGACTTTT TERM 2180 1562975 - 1562941 - f 71 -9.3 -3.3692 | opp_overlap 1562941, overlap 1562940 CGTTACGTTAAAAAT TGCCCGTTCGTGAAC CAATT GTTTGCAAACGGGCA TGACTTCTGACTTTT aldA 1563133 - 1564572 + | aldehyde dehydrogenase A TERM 2181 1564607 - 1564582 - T 80 -10.4 -3.71527 | overlap 1564584 TCGTAATGAGTGAAA GAGGCGGAGG TTTTTT CCTCCGCCTG TGCGCGTCAGAGTTT TERM 2182 1564605 - 1564584 - T 100 -13 -3.43853 | overlap 1564582 GTAATGAGTGAAAGA GGCGGAGG TTTTTT CCTCCGCC TGTGCGCGTCAGAGT UTI89_C1638 1565615 - 1564614 - | glyceraldehyde 3-phosphate dehydrogenase A TERM 2183 1565778 - 1565761 - H 73 -4.9 -4.6971 | gap 1, overlap 1565762 1565763 GAAATTTTAAGAAAA GCCCGTTA TGT TAACGG-C AAATTATGTTAAAGC cybB 1565804 - 1566334 + | cytochrome b561 TERM 2184 1566384 - 1566352 - f 77 -4.9 -4.92385 | overlap 1566366 1566370 GATATTTAAAGAAAA CGCCTGTACTA AAACCGACCCG TGGTACAGGCG AAGAATACGGGCCTA TERM 2185 1566608 - 1566623 + G 70 -5.4 -4.38712 | ACTTATCCTGGTTAT GGGAAC GCTT GTTTCC TTTTATGCCGATGCC ydcA 1566579 - 1566752 + | hypothetical protein hok 1567316 - 1566825 - | hypothetical protein UTI89_C1642 1566910 - 1567380 + | hypothetical protein TERM 2186 1567412 - 1567391 - TR 75 -8.7 -3.76413 | opp_overlap 1567389, overlap 1567394 TGTGAAAATGTTAAA GGAGGGATC GACA GATCCCTTC ACCTTTCAGAACGGC ydcI 1568482 - 1567418 - | transcriptional regulator YdcI TERM 2187 1568916 - 1568933 + G 75 -5.5 -4.7078 | ATGATGCTTCTCTGG CGCGTAA TCCC TTCCGCG TTTTTACCTCGTTAC ydcJ 1568558 - 1569901 + | hypothetical protein mdoD 1570126 - 1571781 + | glucan biosynthesis protein D TERM 2188 1571794 - 1571817 + F 75 -11 -2.90075 | TAATCGTTTTTTCTT CGGCATCTTC TTCG GGAGGTGCCG TCTGGTTAAACACGA ydcH 1571915 - 1572145 + | hypothetical protein TERM 2189 1572156 - 1572172 + F 100 -10.8 -5.02074 | overlap 1572163 TGTAAACTTTCCTAA GCCGCC AGCCA GGCGGC TTTTTTAACAGCTGC rimL 1572193 - 1572747 + | ribosomal-protein-L7/L12-serine acetyltransferase ydcK 1573719 - 1572739 - | hypothetical protein TERM 2190 1573170 - 1573158 - G 77 -3.3 -5.0925 | opp_overlap 1573158 TGGCAAAATCAAAAA CTTCG GCG CGATG TTCAATAAAAGCATA TERM 2191 1574325 - 1574343 + G 72 -5.3 -4.56597 | gap 1, overlap 1574322 TGGTGCGTTGGGCTA CACC-GAC GCCG GTCTGGTG TTTTTAGGCGCAGGC tehA 1573735 - 1574835 + | potassium-tellurite ethidium and proflavin transporter TERM 2192 1575371 - 1575342 - g 73 -9.2 -3.58428 | GTGAAATACAATGAA GACGTCGGCGAG CTGCAC CGCACCGACGCC AACGGTAATCGTATT tehB 1574832 - 1575425 + | tellurite resistance protein TehB TERM 2193 1575461 - 1575441 - f 71 -5.3 -4.44667 | TCCGGTAAGAACAAA GCGCGTGAA AAT TCCCCACGC TGAGATGGTTTACTG TERM 2194 1575809 - 1575825 + G 79 -3.7 -5.03145 | TCTAAAATCACCCAG CCAGA TAAATAT TCTGG TTTTTTAAACAATTA TERM 2195 1575870 - 1575881 + G 70 -5.8 -4.28774 | AAACAACCTCGGCAA CAGG TAAA CCTG TTTTACGTTGGGTAG UTI89_C1651 1575728 - 1576396 + | hypothetical protein TERM 2196 1576405 - 1576424 + TF 100 -13.6 -5.21236 | AAAGTAGTTCCAGAC GCGCCATC GTTA GATGGCGC TTTTTATTATCGGTT ydcO 1577726 - 1576431 - | hypothetical protein TERM 2197 1576731 - 1576718 - Gf 100 -8.1 -5.68438 | overlap 1576720 CGATCAAATAAAAAA TGCCG GCAA CGGCA GCGGCCAGCCAACGT ydcN 1577695 - 1578231 + | hypothetical protein TERM 2198 1578260 - 1578280 + FH 78 -6.1 -4.63527 | overlap 1578262 TTCGCAACGTCGCGC TTGTGGCTA AAA TAGCCGCCA TTTTTCAGCTACTGG ydcP 1578262 - 1580265 + | putative protease YdcP precursor yncJ 1580587 - 1580357 - | hypothetical protein UTI89_C1656 1580772 - 1580644 - | hypothetical protein UTI89_C1657 1580799 - 1581002 + | hypothetical protein TERM 2199 1581311 - 1581298 - g 81 -4.5 -5.12068 | CACAGGCAATAAAAA TGCCG AAAG CGACA GTCATTCCAGTCACA TERM 2200 1581978 - 1581990 + G 70 -5.5 -4.31688 | opp_overlap 1581970 1581969, overlap 1581969 GCGAAAGCGTGGGAT CGCCA CGA TGGTG TTTTGCATTGCTCTT ydcR 1581081 - 1582487 + | hypothetical protein ydcS 1582732 - 1583877 + | putative ABC transporter periplasmic binding protein ydcS precursor ydcT 1583895 - 1584908 + | ABC transporter ATP-binding protein TERM 2201 1584948 - 1584964 + G 72 -6.5 -4.32177 | CCTTCACGTCCAGGT CTGGGTA AGG TGCCCGG TTTCTTCTGGCGTAA TERM 2202 1585212 - 1585222 + G 70 -6.8 -4.14243 | overlap 1585186 1585207 GTGACTATCGCCAGC GCCA TTC TGGC TTTTCCAATGGCGTG TERM 2203 1585656 - 1585672 + G 71 -2.9 -4.77165 | TCTATCTTTACCTTC TCACTCA CGC TGGGCGA TTTTATTGTCCCGCA ydcU 1584909 - 1585850 + | ABC transporter permease TERM 2204 1586251 - 1586264 + G 70 -3.8 -4.68994 | TTTTTCACCATCGTG GTCG GTCATG CGAC TTTTTGCGTAGTGGT TERM 2205 1586439 - 1586465 + G 74 -8.1 -4.08216 | gap 1 GCTGGCGTTTGCCTT GTCGTT-CGATG AAAT CATCGTGACGAC TTTTACGGCAGGTCA UTI89_C1662 1585840 - 1586634 + | putative transport system permease protein ydcW 1586656 - 1588080 + | gamma-aminobutyraldehyde dehydrogenase UTI89_C1664 1588547 - 1588269 - | hypothetical protein ydcX 1588392 - 1588640 + | hypothetical protein ydcY 1588726 - 1588959 + | hypothetical protein TERM 2206 1588993 - 1588966 - T 80 -8.4 -4.25283 | gap 1, overlap 1588969 ATCCTCTGATTAAAA TGAGCGTCTGGCC ACC AGCCAGGCGC-CA ACCACAAGTAAAATT TERM 2207 1588991 - 1588969 - T 81 -11.2 -3.13504 | overlap 1588966 CTCTGATTAAAATGA GCGTCTGGCC ACC AGCCAGGCGC CAACCACAAGTAAAA ydcZ 1589409 - 1588960 - | hypothetical protein yncA 1589987 - 1589406 - | acetyltransferase YncA UTI89_C1669 1590131 - 1590367 + | hypothetical protein TERM 2208 1590397 - 1590374 - T 91 -8.8 -4.99645 | overlap 1590377 AGCCGATAAATAAAA TACGCCCGGC AAAT ACCGGGCTTA AAGATAATTACTCAA TERM 2209 1590394 - 1590377 - T 73 -10.5 -3.05964 | overlap 1590374 CGATAAATAAAATAC GCCCGGC AAAT ACCGGGC TTAAAGATAATTACT yncD 1592507 - 1590405 - | tonB-dependent receptor YncD precursor TERM 2210 1591836 - 1591851 + g 76 -4 -4.96848 | AATGCGTACGCCCAG TTTGGC ATTG GCTAAA TTTTTCTGTGCGCCG TERM 2211 1592930 - 1592907 - g 72 -4.4 -4.72497 | overlap 1592908 TAGCCAGCAAGAAAA CGCGCTGTGG CTTG CCACTTCGCA AAGCCGCAAACTGGA yncE 1592749 - 1593810 + | hypothetical protein TERM 2212 1593892 - 1593914 + T 100 -14.9 -4.19953 | GTCAGTAGTCTGAAT TTGCCCGGC ACGTA GCCGGGCAA TTTTGCAATTAACTC ansP 1595473 - 1593923 - | L-asparagine permease TERM 2213 1594554 - 1594544 - G 74 -3.2 -4.9792 | CAGTTTAGAGAAAAA CGTC ACG AACG GACTTTGCCCCGCCT TERM 2214 1595575 - 1595597 + H 70 -7.1 -3.87815 | gap 1, opp_overlap 1595564 1595573 1595575 AAACGATGCAAAACA TCCCCTTACA ATCC TG-AAGGGGA TTTATACAACTGACG UTI89_C1673 1595689 - 1595865 + | putative transferase UTI89_C1674 1595978 - 1596289 + | hypothetical protein UTI89_C1675 1596830 - 1597114 + | hypothetical protein TERM 2215 1597513 - 1597534 + GF 75 -10.9 -2.8733 | gap 1, opp_overlap 1597513, overlap 1597512 1597510 ATTACTGAACGAGAA CGGCGT-CAC GGA GTGGACGCCG CTGTTTTATGAGGAC TERM 2216 1597534 - 1597513 - gf 81 -10.9 -3.52919 | gap 1, opp_overlap 1597513 1597512 1597510 ATTACTGAACGAGAA CGGCGT-CAC GGA GTGGACGCCG CTGTTTTATGAGGAC UTI89_C1676 1597133 - 1599538 + | hypothetical protein TERM 2217 1599983 - 1599971 - gf 100 -3.3 -5.79526 | opp_overlap 1599980 AGATGGCAAAAAAAA TCCAG TAA CGGGA AAGGATTCTCATGTT UTI89_C1677 1599492 - 1600289 + | hypothetical protein TERM 2218 1600375 - 1600364 - f 100 -3 -5.97575 | AAGCTATAAAAAAAA TCAT AATA ATGA CAATCGTAAATATTA UTI89_C1678 1600660 - 1601127 + | hypothetical protein UTI89_C1679 1601240 - 1601383 + | hypothetical protein yddH 1602562 - 1601993 - | hypothetical protein nhoA 1602737 - 1603582 + | N-hydroxyarylamine O-acetyltransferase TERM 2219 1603595 - 1603626 + T 79 -12.2 -2.52795 | opp_overlap 1603613, overlap 1603605 1603621 TAATTTATGTCAGGT TGCCGGATGTGGCG TAAA CGCCTTATCCGGCC TACATTAGCCCGGTT yddE 1604571 - 1603678 - | hypothetical protein narV 1605331 - 1604651 - | respiratory nitrate reductase 2 gamma chain TERM 2220 1604960 - 1604935 - G 78 -5.4 -4.79174 | overlap 1604952 ACTGAATTAACAAAA TGGCGAGGAT CAGGAT ATCCGCACCA GAAGACGTCGCCCTG TERM 2221 1605292 - 1605274 - G 71 -2.3 -4.98255 | overlap 1605275 TTCCAAGGATAAAAA CCGTGCC GCACA AGTACGG GTAGATATCGTAAAA narW 1606023 - 1605328 - | cryptic nitrate reductase 2 delta subunit narY 1607567 - 1606023 - | cryptic nitrate reductase 2, beta subunit TERM 2222 1607470 - 1607484 + g 75 -5.6 -4.59773 | TACTCCATGCCTTCG CGTCCG GTC CAGACG TTTTTACAGGTCACC narZ 1611427 - 1607564 - | respiratory nitrate reductase 2 alpha chain TERM 2223 1610081 - 1610107 + gr 71 -3.1 -4.82901 | gap 1 GGTTTCCGTACCGGC GGCA-ATGGA TTCCAGGT TCCATTTGCC TTTTTCTCCCCAGCG TERM 2224 1610387 - 1610407 + gr 89 -11.9 -3.64703 | opp_overlap 1610365, overlap 1610390 GCCCATTGCCATTGC CAGGGCACT ATC AGTGCCTTG TTTCGGTGCCAGCCA TERM 2225 1610390 - 1610404 + gr 82 -10 -3.96216 | overlap 1610387 CATTGCCATTGCCAG GGCACT ATC AGTGCC TTGTTTCGGTGCCAG TERM 2226 1611018 - 1611037 + gr 80 -10.6 -3.32769 | opp_overlap 1611012, overlap 1611011 CAGGAGTAACTTGCG CCACGCGG GCAG CCGCGAGG TTCATGATTTGGCAG narU 1612787 - 1611399 - | nitrite extrusion protein 2 TERM 2227 1611557 - 1611543 - GR 85 -2.7 -5.4505 | CTGCGGAATAAAAAA GCCGC CCACT GCGCC AATGGCTGAGATAAA TERM 2228 1611779 - 1611757 - GR 75 -8.5 -3.79021 | gap 1 TAAAATGCGATGAAA TTACCGGAGC CTGT GC-CCGGTAA GGTAAGGAACAGCAG TERM 2229 1611835 - 1611818 - GR 71 -2.7 -4.86033 | AAATCGCCATAAAAA TGAAGTT GATC AACGTCA CCCGCACGCCGCCGA TERM 2230 1612255 - 1612229 - GR 71 -3.1 -4.84761 | gap 2, overlap 1612233 ATACGGGTACAAAAA TGAC-CAGC-GGT GCA ACCAGCTGCATCA CACTTACACCTAAGT TERM 2231 1613054 - 1613032 - R 72 -9.8 -3.1706 | opp_overlap 1613032 1613029 1613033 AATTTATCTGATTAA CTGCCGGGCC GTA GACCCGACAA TTATTTTAGCCACGA yddG 1613941 - 1613060 - | hypothetical protein TERM 2232 1614947 - 1614919 - g 90 -7.6 -4.75174 | gap 1 GATGGAAGCGAAAAA CAACAACGATGCA ACCT TG-ATCGTTGTCG ATCCCCGTTTTACGC TERM 2233 1615731 - 1615703 - g 76 -9 -3.73775 | gap 1 GTTAGCCTGATGAAA TCTTTCTACGGCG ATGC CGC-GCAGAAAGA GAACAACTGGGGCTA fdnG 1614173 - 1617220 + | FdnG, alpha subunit of formate dehydrogenase-N UTI89_C1690 1618138 - 1617197 - | hypothetical protein TERM 2234 1618019 - 1618007 - Gg 71 -9.1 -3.5394 | opp_overlap 1618006 1618009, overlap 1617996 AAAGGCGCGTTGAAA CCGCT GGC AGCGG CTGGCTTTATTGCCA fdnH 1617233 - 1618117 + | formate dehydrogenase-N beta subunit fdnI 1618110 - 1618763 + | formate dehydrogenase-N subunit gamma TERM 2235 1618808 - 1618789 - TfRH 70 -6.4 -4.19238 | opp_overlap 1618789 GCTTTAAGCTGAAAA TGGCGC TGTAAAAG GCGCCA TTTTTTTATTGTAGA TERM 2236 1618789 - 1618808 + TFrH 100 -7.1 -5.88565 | opp_overlap 1618789 GCTTTAAGCTGAAAA TGGCGCT GTAAAA GGCGCCA TTTTTTTATTGTAGA TERM 2237 1618967 - 1618986 + GTr 100 -6.4 -5.8187 | GTCATCAGTTTCAAA TGGCGCTT TATA AGGTGCCA TTTTTTTATTGCGTA UTI89_C1694 1619276 - 1618992 - | hypothetical protein UTI89_C1693 1618966 - 1619238 + | hypothetical protein UTI89_C1695 1619548 - 1619276 - | hypothetical protein adhP 1620780 - 1619740 - | alcohol dehydrogenase TERM 2238 1620879 - 1620852 - R 77 -7.6 -4.37534 | opp_overlap 1620862, overlap 1620853 1620854 AAAGGGAGAGGAAAA TTGCCCGGTAGC CTTC ACTACCGGGCGC AGGCTTAGATGGAGG TERM 2239 1620878 - 1620853 - R 78 -11.1 -3.21436 | opp_overlap 1620862, overlap 1620852 1620854 AAGGGAGAGGAAAAT TGCCCGGTAGC CTTC ACTACCGGGCG CAGGCTTAGATGGAG TERM 2240 1620877 - 1620854 - R 89 -14.6 -2.52138 | opp_overlap 1620862, overlap 1620853 1620852 AGGGAGAGGAAAATT GCCCGGTAGC CTTC ACTACCGGGC GCAGGCTTAGATGGA sfcA 1622608 - 1620884 - | malate dehydrogenase TERM 2241 1621798 - 1621826 + g 100 -6.8 -5.60993 | gap 1, overlap 1621820 AAGAACAAATTTCAT TGCGATAGCGGTT AAGT AACGGC-ATCGCA TTTTTTTGTGCGAAG TERM 2242 1622704 - 1622683 - R 100 -13.1 -5.71295 | opp_overlap 1622683 AGATAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA TERM 2243 1622683 - 1622704 + r 100 -13.1 -3.82031 | opp_overlap 1622683 AGATAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA rpsV 1622874 - 1622737 - | 30S ribosomal subunit S22 bdm 1623191 - 1622976 - | biofilm-dependent modulation protein UTI89_C1700 1623358 - 1623498 + | hypothetical protein osmC 1623536 - 1623967 + | osmotically inducible protein OsmC TERM 2244 1624143 - 1624130 - T 100 -9.5 -5.28942 | CACGTTAAATAAAAA CCCGC GAGT GCGGG CGAGAGGAATTTATC UTI89_C1702 1626580 - 1624157 - | cAMP phosphodiesterase TERM 2245 1626533 - 1626520 - G 90 -4.5 -5.40072 | GGGCGGGGAAAAAAA TGCCA TCGG CGGCA GTATCCGCATCGGTT UTI89_C1703 1626799 - 1626581 - | hypothetical protein UTI89_C1704 1626825 - 1626652 - | hypothetical protein yddW 1628442 - 1627123 - | lipoprotein YddW precursor TERM 2246 1628547 - 1628525 - R 100 -13.5 -4.83593 | opp_overlap 1628525 AACAAGCACGAAAAA GGGAGCGAT GAATT ATCGCTCCC TTGTCTTATAACCAT TERM 2247 1628525 - 1628547 + r 100 -14.2 -3.75378 | opp_overlap 1628525 AACAAGCACGAAAAA GGGAGCGATG AAT TATCGCTCCC TTGTCTTATAACCAT xasA 1630108 - 1628573 - | amino acid antiporter TERM 2248 1629127 - 1629140 + g 71 -3.1 -4.8667 | gap 1, opp_overlap 1629125, overlap 1629125 1629127 TCATTTTAGCGAATG CC-GCT GGC AGCAGG TTTTTCTGCGCTGTG TERM 2249 1629975 - 1629958 - G 75 -5.5 -4.67256 | GAATAAACCATAAAA TCCCGCC TAAT AGCAGGA AGAAGACTAATGAAA TERM 2250 1630150 - 1630178 + r 77 -7.6 -4.30416 | overlap 1630152 TCGGAACCGCACCTG TTTTGTTCTGAA GCGTA TTCAGAACAATA TTTTCCGTTGCTAAT TERM 2251 1630152 - 1630176 + r 80 -10.2 -3.75051 | overlap 1630150 GGAACCGCACCTGTT TTGTTCTGAA GCGTA TTCAGAACAA TATTTTCCGTTGCTA TERM 2252 1630245 - 1630216 - R 100 -15.1 -3.57387 | opp_overlap 1630220 1630222 1630243, overlap 1630217 AACAGACTTTGGAAA TTGTCCCGAAACG GCTT CGTTTCGGGACAC CGTTACCGTTAAACG TERM 2253 1630244 - 1630217 - R 100 -18.6 -2.7395 | opp_overlap 1630220 1630222 1630243, overlap 1630216 ACAGACTTTGGAAAT TGTCCCGAAACG GCTT CGTTTCGGGACA CCGTTACCGTTAAAC gadB 1631733 - 1630264 - | glutamate decarboxylase beta TERM 2254 1632019 - 1631993 - R 89 -10.1 -4.4727 | opp_overlap 1631991 1631988 1631985 1631993, overlap 1631994 CGAATATTGATAAAA TCCCCGCCAAC GATGT GTTGACGGGGC TGTGATTATTTTGGC TERM 2255 1632018 - 1631994 - R 93 -13.6 -3.27639 | opp_overlap 1631993 1631991 1631988 1631985, overlap 1631993 GAATATTGATAAAAT CCCCGCCAAC GATGT GTTGACGGGG CTGTGATTATTTTGG pqqL 1634820 - 1632025 - | zinc protease PqqL TERM 2256 1632535 - 1632556 + g 74 -2.3 -5.093 | gap 1, opp_overlap 1632540, overlap 1632540 ATAACGCTTCCACTG TGAAACCTGT GCC ACTGGTT-CA TTTTGTTCTTTTACA TERM 2257 1632853 - 1632872 + g 74 -7.8 -4.08767 | overlap 1632865 1632866 CTGGGCGAATTTCTC CGCTGGAC GCTG GTCGAGCG TTTTCAACGCCTGAA TERM 2258 1634273 - 1634295 + g 81 -11.2 -3.62572 | opp_overlap 1634271 1634270, overlap 1634274 GCCAGCAGGAAAGGG CGGCGCGCCT GAG AGGTGCGCCA TTTCGCATCCTGATG TERM 2259 1634274 - 1634294 + g 90 -14.7 -2.77222 | opp_overlap 1634271 1634270, overlap 1634273 CCAGCAGGAAAGGGC GGCGCGCCT GAG AGGTGCGCC ATTTCGCATCCTGAT yddB 1637237 - 1634865 - | hypothetical protein TERM 2260 1634905 - 1634926 + g 76 -10.9 -3.32023 | gap 1, opp_overlap 1634899 1634896, overlap 1634903 CAGAAAGTACGGCCA CTGGCGTAGG TCG CC-ACGCCAG TATTCGTTGTATCAA TERM 2261 1635486 - 1635502 + g 78 -7.9 -4.39989 | GGTGGTTTTAGTCGC GCTGTCG GTA CGACTGC TTTTGCTGATTTGAT yddA 1638960 - 1637275 - | ABC transporter ATP-binding protein TERM 2262 1638731 - 1638709 - G 76 -7.6 -4.2586 | GGATATTAATACAAA GATCCCCAGC AGG GCAGGGAACC AAAGGACAAGCTGCC TERM 2263 1639197 - 1639172 - R 82 -10.5 -3.95424 | opp_overlap 1639171 1639170 1639174 ATGATGAAGACGAAA CACCCGACA GGAATTTA TGTCGGGTG CCTTGTTAAGGTCAT ydeM 1640423 - 1639251 - | hypothetical protein TERM 2264 1640448 - 1640427 - R 87 -11.5 -3.61715 | opp_overlap 1640421, overlap 1640428 TATCTCGCTCAATAA GGCGGCGGA AAAA TCCGCCGCA TGAAGGTTAAGTTAT TERM 2265 1640447 - 1640428 - R 89 -15 -2.76815 | opp_overlap 1640421, overlap 1640427 ATCTCGCTCAATAAG GCGGCGGA AAAA TCCGCCGC ATGAAGGTTAAGTTA ydeN 1642175 - 1640460 - | putative sulfatase YdeN precursor TERM 2266 1642475 - 1642495 + r 71 -9.7 -3.04089 | opp_overlap 1642474 1642473, overlap 1642474 GCCTAAAAACAACGC GGGGCAG GGAATGG CTGCCCC ATTTAATTCTTACGC UTI89_C1713 1643305 - 1642544 - | transcriptional regulator YdeO UTI89_C1714 1643577 - 1643380 - | hypothetical protein TERM 2267 1643811 - 1643781 - R 90 -12.8 -3.28537 | opp_overlap 1643775 ATAGTCAATGAGGAA TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA ATGAGGAGGCGAATT ydeP 1646104 - 1643825 - | putative oxidoreductase fmlD 1647357 - 1646443 - | putative Fml fimbrial adhesin FmlD precursor fmlC 1649232 - 1647682 - | putative outer membrane usher FmlC protein fmlB 1649984 - 1649274 - | periplasmic chaperone FmlB protein TERM 2268 1650275 - 1650306 + r 79 -9.4 -3.85165 | gap 1, overlap 1650276 CATTGGTGAATTTCT C-GGGTGTGCGTAGC CAT GCCACACACACCCTG TTTCAATTTCAGATG TERM 2269 1650276 - 1650304 + r 100 -13.1 -3.50832 | overlap 1650275 ATTGGTGAATTTCTC GGGTGTGCGTAGC CAT GCCACACACACCC TGTTTCAATTTCAGA fmlA 1650957 - 1650346 - | putative Fml fimbriae subunit TERM 2270 1651000 - 1650986 - R 77 -7.2 -4.37886 | opp_overlap 1650985 TTATTGCTTATAAAA CAAGAA TCA TTCTTG ATTGGATGTTGCCCT UTI89_C1720 1651679 - 1651437 - | hypothetical protein UTI89_C1721 1652467 - 1651685 - | hypothetical protein TERM 2271 1652276 - 1652266 - G 70 -4 -4.62336 | opp_overlap 1652266 AGCCGAGTGTAAAAA TGAT GGC ATCA ATATCTTTCGGTAAA UTI89_C1722 1652577 - 1652834 + | hypothetical protein UTI89_C1723 1653403 - 1653155 - | hypothetical protein TERM 2272 1653438 - 1653477 + Gr 71 -7.8 -3.81488 | opp_overlap 1653451, overlap 1653476 GTACGGCTTGGCCAA CCCCGGACAGCAACAAAA CAAG TTTTGTCACTGACCGGCG TTATCTTTCAAAACA UTI89_C1724 1653363 - 1653728 + | hypothetical protein TERM 2273 1653749 - 1653783 + Tr 78 -5.7 -5.0133 | gap 1, opp_overlap 1653752 CACGACGATAAGACT TAAGGCG-GCCACCGG GAAG TCGGTCACGCGCCTTA TTTTTTACAGACATA TERM 2274 1653831 - 1653804 - TR 72 -5.7 -4.4458 | TACAGACATAATAAA TCCTCTAAGTA ACTGAA TACCTAGAAGA TGTCGTACTGTTCAT UTI89_C1725 1655130 - 1653886 - | putative phage-related secreted protein UTI89_C1726 1656155 - 1655130 - | putative phage-related membrane protein UTI89_C1728 1656446 - 1656159 - | putative phage-related membrane protein UTI89_C1727 1656130 - 1656462 + | hypothetical protein UTI89_C1729 1658171 - 1656459 - | hypothetical protein TERM 2275 1658223 - 1658203 - R 86 -9.7 -4.43309 | overlap 1658204 TAACCTCAAGTAAAA CGGGCGATA TTG CATCGCCCA TGAATAATGAATTTA TERM 2276 1658222 - 1658204 - R 78 -11 -3.25262 | overlap 1658203 AACCTCAAGTAAAAC GGGCGATA TTG CATCGCCC ATGAATAATGAATTT UTI89_C1730 1658469 - 1658236 - | putative phage-related membrane protein UTI89_C1731 1658755 - 1658504 - | putative phage-related membrane protein UTI89_C1732 1659075 - 1658758 - | hypothetical protein UTI89_C1733 1660139 - 1659087 - | hypothetical protein UTI89_C1734 1660335 - 1660757 + | hypothetical protein TERM 2277 1660788 - 1660812 + F 93 -11.5 -4.20367 | opp_overlap 1660788 CAGGAATGAGACAAA CGTGCAGTATT ACC AACACTGCACG TTCTTTATTGCGCGA TERM 2278 1660812 - 1660788 - f 100 -13.7 -4.14541 | opp_overlap 1660788 CAGGAATGAGACAAA CGTGCAGTATT ACC AACACTGCACG TTCTTTATTGCGCGA UTI89_C1735 1660857 - 1661279 + | hypothetical protein TERM 2279 1661287 - 1661302 + F 80 -10.4 -3.72576 | opp_overlap 1661287 ACTGGTAATTTCAAA CCGTGG GAAA CCACGG TTTAATAAGAGGAAA TERM 2280 1661302 - 1661287 - f 78 -10.4 -3.66356 | opp_overlap 1661287 ACTGGTAATTTCAAA CCGTGG GAAA CCACGG TTTAATAAGAGGAAA TERM 2281 1661599 - 1661587 - g 100 -2.7 -6.04953 | overlap 1661588 AGAGAAAGAAAAAAA CGTAA CCA TTACA ATACCAAAAAGCAAG UTI89_C1736 1661387 - 1662496 + | hypothetical protein TERM 2282 1662569 - 1662534 - T 75 -9 -3.60627 | opp_overlap 1662536, overlap 1662536 TGACGTTATGCTAAA GAGGCCGCTGCG GGATTCGATTTT CGCAGCGGCCTT TTCAACATAACGAGT TERM 2283 1662536 - 1662567 + T 100 -15.9 -4.11216 | opp_overlap 1662534 1662536 ACGTTATGCTAAAGA GGCCGCTGCGGGA TTCGAT TTTCGCAGCGGCC TTTTCAACATAACGA TERM 2284 1662567 - 1662536 - T 83 -11.6 -3.38224 | opp_overlap 1662536, overlap 1662534 ACGTTATGCTAAAGA GGCCGCTGCG GGATTCGATTTT CGCAGCGGCC TTTTCAACATAACGA hipB 1664286 - 1664002 - | DNA-binding transcriptional regulator HipB TERM 2285 1664029 - 1664044 + g 83 -5.4 -5.09225 | ATCTTGCTGTTCTGT TGCTTC TGGC GAGGCA TTTTTTGCGTCGCAT tam 1664576 - 1665334 + | trans-aconitate 2-methyltransferase yneE 1666303 - 1665338 - | hypothetical protein TERM 2286 1666070 - 1666057 - G 79 -2.3 -5.28166 | GAAAACCAAGAAAAA TGGCG ATGG CGACA CCGAGAATGCTGAAC TERM 2287 1666378 - 1666345 - R 100 -14.1 -3.38291 | opp_overlap 1666351, overlap 1666337 1666351 CCTACAAGCTTACAA CATTAACAGGTGC TGCATGTG GCACCTGTTAATG ATAAAGGCACACAGA TERM 2288 1666439 - 1666424 - R 89 -10.4 -4.58585 | TAGCGAAATAAGAAA CCCGGT CGAA ACCGGG TTCAGAGTATTAGCA uxaB 1667900 - 1666449 - | altronate oxidoreductase yneF 1669545 - 1668127 - | hypothetical protein TERM 2289 1668828 - 1668791 - G 81 -12.1 -3.14404 | ATATCAATCACCGAA TTTGCCACCAGTACGAC TTCC ACCGCACCGGTGACAAA GGTCAACAGACATGT TERM 2290 1669486 - 1669476 - G 80 -5.4 -4.91109 | opp_overlap 1669476 TGGTTAGCACAAAAA TAGC GAT GCTA TTACGTAGCAGATGA yneG 1670043 - 1669684 - | hypothetical protein TERM 2291 1669817 - 1669799 - G 82 -11.7 -3.524 | opp_overlap 1669794 CACTTAGCCAGACAA CCGCGAC AACAG GTCGCGG TGGCGTGTTGAGCGA yneH 1670969 - 1670043 - | glutaminase TERM 2292 1670984 - 1671008 + r 75 -10.8 -2.87931 | gap 1 CTTTCTACTCCTGGA C-CGCAGGTCT GAAA AGACCTGCGAG TATATCAGAGCTGAA yneI 1672445 - 1671033 - | aldehyde-dehydrogenase like protein YneI TERM 2293 1671433 - 1671445 + g 77 -3.3 -5.03715 | opp_overlap 1671428 1671427, overlap 1671426 AGTAACAAACGCGCA CCCTG CGC CAGTG TTTTTTCCACCTGAT TERM 2294 1672897 - 1672919 + G 85 -14.2 -2.78384 | TCACTTTCCACCGGC CCTTCCGGCA CTA TGCTGGAAGG TGTGCTGGAGGGAAA yneJ 1672522 - 1673403 + | transcriptional regulator YneJ yneK 1673481 - 1673600 + | hypothetical protein TERM 2295 1673918 - 1673941 + G 70 -3.8 -4.70583 | GACAATTTATGCATG GGTAGTGGCG CTAA TGTCATTGCC TTTTATGTTAATGAC sotB 1673742 - 1674932 + | sugar efflux transporter TERM 2296 1674952 - 1674939 - T 77 -9.5 -3.68662 | opp_overlap 1674939 ACACAATAGTCGAAA GGCCC ATTC GGGCC TTTTTTAATGATACG TERM 2297 1674939 - 1674952 + T 100 -9.5 -5.1861 | opp_overlap 1674939 ACACAATAGTCGAAA GGCCC ATTC GGGCC TTTTTTAATGATACG marC 1675622 - 1674957 - | multiple drug resistance protein MarC marR 1675834 - 1676268 + | DNA-binding transcriptional repressor MarR marA 1676289 - 1676672 + | DNA-binding transcriptional activator MarA TERM 2298 1676808 - 1676841 + G 77 -8.9 -4.08485 | gap 1, overlap 1676808 TTCCTGTGGCAATGT C-GTGGTTGTTCCCAC ATC GCAGGAACAACCACCG TTTGATTTAAATCAC marB 1676704 - 1676922 + | hypothetical protein TERM 2299 1676927 - 1676954 + T 100 -18.6 -3.71265 | opp_overlap 1676914 ACGCTATGTAGTTAT TGTCAGGCTCTG ATCA CAGAGCCTGACA TTTCCGTAATATCTT celA 1678424 - 1676979 - | 6-phospho-beta-glucosidase TERM 2300 1677772 - 1677793 + g 85 -10.3 -4.1711 | opp_overlap 1677772 1677775, overlap 1677775 CTGGCAACTAACTCA TAATGTACC GCCT GGTACATTA TTTGTTCGCGCTCAT TERM 2301 1677775 - 1677790 + g 76 -7.6 -4.20768 | opp_overlap 1677775 1677772, overlap 1677772 GCAACTAACTCATAA TGTACC GCCT GGTACA TTATTTGTTCGCGCT UTI89_C1753 1680115 - 1678442 - | putative outer membrane protein YieC precursor UTI89_C1754 1680484 - 1680170 - | PTS system, cellobiose-specific IIA component UTI89_C1755 1681870 - 1680509 - | hypothetical protein TERM 2302 1681257 - 1681247 - G 82 -2.6 -5.32882 | CACCATGACAAAAAA TATT GGC AATA AAACTTTAAATGAAC UTI89_C1756 1682257 - 1681946 - | PTS system, cellobiose-specific IIB component TERM 2303 1682370 - 1682358 - H 73 -6.3 -4.329 | overlap 1682360 TAATACAGCAATAAA GTTGT TCA ACAAC AGGGTGATAATTAAA UTI89_C1757 1682456 - 1683154 + | hypothetical protein TERM 2304 1683197 - 1683157 - T 73 -6.2 -4.36914 | gap 1, opp_overlap 1683157 1683158 1683162, overlap 1683158 TTTTCCGCGATAAAA GCAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATGG TTTAGCCTCTGACCT TERM 2305 1683157 - 1683197 + T 72 -8.4 -3.63805 | gap 1, opp_overlap 1683157 1683158, overlap 1683158 1683162 TTTTCCGCGATAAAA GCAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATGG TTTAGCCTCTGACCT TERM 2306 1683158 - 1683196 + T 79 -11.9 -2.77962 | gap 1, opp_overlap 1683157 1683158, overlap 1683157 1683162 TTTCCGCGATAAAAG CAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATG GTTTAGCCTCTGACC TERM 2307 1683196 - 1683158 - T 72 -9.7 -3.21934 | gap 1, opp_overlap 1683158 1683157 1683162, overlap 1683157 TTTCCGCGATAAAAG CAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATG GTTTAGCCTCTGACC TERM 2308 1683162 - 1683192 + T 79 -11.3 -3.01765 | gap 1, opp_overlap 1683158 1683157, overlap 1683158 1683157 CGCGATAAAAGCAGA CGCACAGAGTGCTG GCAT CA-CATTCTGTGCG TATGGTTTAGCCTCT ydeD 1684098 - 1683199 - | O-acetylserine/cysteine export protein TERM 2309 1683574 - 1683607 + g 77 -3.1 -5.07486 | gap 1, opp_overlap 1683579, overlap 1683576 1683580 CCAGATTACCAGCGA CATCACTGCCGGACGC GTT GCGTGCGACA-TGATC TTTTTATTGAAGATG TERM 2310 1683740 - 1683729 - G 77 -5.8 -4.63527 | opp_overlap 1683735 CCAGTACGCCAAAAA TCGC TAAG GCGA TCCCCGCCAATTGTT TERM 2311 1683830 - 1683808 - G 79 -2.6 -5.23316 | CACGATAGTAAAAAA CGCTTGTGCC TGT AACACCAACG AGGCCAGTCCAGCAG ydeF 1684293 - 1685480 + | putative MFS-type transporter YdeE TERM 2312 1685456 - 1685472 + T 70 -5.7 -4.40298 | overlap 1685455 AATTCGTGCAAGACC GTGGGGG CAG CCCGCGC TTTGTTGATTTAAGT TERM 2313 1685727 - 1685763 + T 91 -10.2 -4.82901 | gap 1, opp_overlap 1685728, overlap 1685728 1685730 ATAATCCCTCACCTA ACCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTGA TTTTTATGACGGCGA TERM 2314 1685762 - 1685728 - T 87 -13.7 -3.06133 | gap 1, opp_overlap 1685727 1685728 1685730 TAATCCCTCACCTAA CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG ATTTTTATGACGGCG TERM 2315 1685728 - 1685762 + T 100 -13.7 -3.49419 | gap 1, opp_overlap 1685728, overlap 1685727 1685730 TAATCCCTCACCTAA CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG ATTTTTATGACGGCG TERM 2316 1685730 - 1685760 + T 100 -14.9 -3.31915 | gap 1, opp_overlap 1685728, overlap 1685728 1685727 ATCCCTCACCTAACC GGCCCCTTGTTACA GTTG TGTA-CAAGGGGCC TGATTTTTATGACGG TERM 2317 1685803 - 1685786 - T 100 -10.5 -5.76949 | GACGGCGAAAAAAAA CCGCCAG TAAA CCGGCGG TGAATGCTTGCATGG ydeH 1686817 - 1685921 - | hypothetical protein TERM 2318 1687057 - 1687022 - R 70 -9.1 -3.26188 | opp_overlap 1687022 1687025, overlap 1687018 1687025 AATAGCATAACCCAA TAACCTAATGGCCCA GTAGTT CAGGCCATCAGGCTA ATTTATTTTTATTTC TERM 2319 1687054 - 1687025 - R 75 -8.6 -3.76168 | opp_overlap 1687025 1687022, overlap 1687018 1687022 AGCATAACCCAATAA CCTAATGGCCCA GTAGTT CAGGCCATCAGG CTAATTTATTTTTAT TERM 2320 1687277 - 1687308 + r 77 -9.4 -3.60035 | opp_overlap 1687275 1687278, overlap 1687274 1687270 1687278 1687303 ATTACTGCTATAACG AGGCTGGTCTGG CGATAAAT CCAGGCCAGCCA TTGGTTGTGTTTATA TERM 2321 1687307 - 1687278 - R 74 -10.7 -2.83271 | opp_overlap 1687278 1687277 1687274 1687270 1687303, overlap 1687275 TTACTGCTATAACGA GGCTGGTCTGG CGATAAAT CCAGGCCAGCC ATTGGTTGTGTTTAT TERM 2322 1687278 - 1687307 + r 85 -12.9 -2.74937 | opp_overlap 1687275 1687278, overlap 1687277 1687274 1687270 1687303 TTACTGCTATAACGA GGCTGGTCTGG CGATAAAT CCAGGCCAGCC ATTGGTTGTGTTTAT dcp 1689430 - 1687319 - | dipeptidyl carboxypeptidase II ydfG 1689486 - 1690247 + | 3-hydroxy acid dehydrogenase TERM 2323 1690256 - 1690273 + F 80 -10.5 -3.8591 | TCAGTAATTTTTATA CCCGGCG TAAC TGCCGGG TTATTGCTTGTCACA ydfH 1690336 - 1691022 + | hypothetical protein TERM 2324 1691031 - 1691054 + TF 100 -13.2 -3.63922 | overlap 1691029 1691043 AGAGTAATTCATTTC CTCTCATCCC ATCC GGGGTGAGAG TCTTTTCCCCCGACT UTI89_C1764 1691429 - 1691157 - | hypothetical protein ydfZ 1691199 - 1691402 + | hypothetical protein TERM 2325 1691409 - 1691432 + gT 100 -11.8 -5.63103 | gap 1, overlap 1691412 ATGAACTAAGCGTGT G-AATGCCGCC GAT GGCGGCATTGC TTTTTTTACTTCACG TERM 2326 1691412 - 1691428 + gT 100 -13.7 -4.07651 | overlap 1691409 AACTAAGCGTGTGAA TGCCGCC GAT GGCGGCA TTGCTTTTTTTACTT ydfI 1692898 - 1691438 - | oxidoreductase YdfI TERM 2327 1692978 - 1692955 - R 93 -9.6 -5.16841 | TTATATGAATAAAAA TCCCCTCTCC GGTA AGAGAAGGGA TTGAGGATTTACAGA rspB 1694442 - 1693399 - | putative dehydrogenase rspA 1695677 - 1694430 - | starvation sensing protein RspA TERM 2328 1694751 - 1694740 - G 74 -5.8 -4.44548 | TACAGCGAAGCAAAA TCGG CAAT CCGA CGCATACCGGTAATT TERM 2329 1695764 - 1695749 - R 100 -4.6 -5.67063 | GTGATCACAAAAAAA GGCGTA TATT TGCGCC GTGAATGGTTGACAA ynfA 1696185 - 1695850 - | hypothetical protein ynfB 1696311 - 1696652 + | hypothetical protein speG 1696687 - 1697247 + | spermidine N(1)-acetyltransferase ynfC 1697996 - 1697250 - | hypothetical protein ynfD 1698026 - 1698373 + | hypothetical protein TERM 2330 1698412 - 1698390 - f 81 -12 -3.08642 | opp_overlap 1698390 1698389 ACATTATCGACTGAA CGCCGGATAC GAC ACATCCGGCG ATTTGAACATACAAC TERM 2331 1698390 - 1698412 + F 74 -10.6 -2.74144 | opp_overlap 1698390, overlap 1698389 ACATTATCGACTGAA CGCCGGAT ACGACAC ATCCGGCG ATTTGAACATACAAC TERM 2332 1699600 - 1699587 - g 74 -5.9 -4.47328 | overlap 1699589 AAGGCGATGATAAAA CAGCG AAAA CGCCG CAGTGGGCTTCGCAA TERM 2333 1700420 - 1700394 - g 100 -3.1 -5.96521 | gap 1 ACGAATTAAAAAAAA TGGGTATCTATA AGCG TAAAGAT-CCCA ATGGTCATTTTGTCG ynfE 1698572 - 1700998 + | putative dimethyl sulfoxide reductase chain YnfE precursor TERM 2334 1702453 - 1702436 - g 86 -4.1 -5.45802 | opp_overlap 1702436, overlap 1702430 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2335 1702436 - 1702453 + G 76 -4.1 -4.93296 | opp_overlap 1702436 1702430 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2336 1702930 - 1702898 - g 85 -2.8 -5.45652 | overlap 1702878 ATCTTTAAGAAAAAA TGCCCGGAAGAAC-AC TAC GTCGCT-TTCCGCGCA TTCCGTGTAGATCCA TERM 2337 1703051 - 1703036 - g 86 -6.2 -5.15969 | opp_overlap 1703035 1703038 TGGGAATTGAAAAAA GATGAA ATTA TTCATC CTCTTCCAGCTTATA ynfF 1701056 - 1703482 + | dimethyl sulfoxide reductase chain YnfF precursor ynfG 1703493 - 1704110 + | Fe-S subunit oxidoreductase ynfH 1704112 - 1704966 + | anaerobic dimethyl sulfoxide reductase chain ynfH TERM 2338 1704973 - 1704992 + F 75 -9.2 -3.6106 | opp_overlap 1704972 1704971, overlap 1704974 GCAGGTTAACAAATT GGTGCGGG GCAA CCCGCACA TTTCAGGATGTTAGG TERM 2339 1704974 - 1704991 + F 82 -12.7 -2.76315 | opp_overlap 1704972 1704971, overlap 1704973 CAGGTTAACAAATTG GTGCGGG GCAA CCCGCAC ATTTCAGGATGTTAG TERM 2340 1705046 - 1705068 + G 95 -9.8 -4.65916 | overlap 1705044 ATAATTTTTCTGTCG CGGCGCGC GTGTTGG GCGCGCTG TTTTATTACGCTCCA TERM 2341 1705084 - 1705105 + G 70 -10.9 -2.74012 | gap 1, opp_overlap 1705088, overlap 1705087 TTTTATTACGCTCCA GAGAGTGCGG AAG CCGCAC-CTC TGGTTGCGGTACTCA TERM 2342 1705102 - 1705088 - g 75 -11.4 -2.8805 | opp_overlap 1705087 1705084 ATTACGCTCCAGAGA GTGCGG AAG CCGCAC CTCTGGTTGCGGTAC TERM 2343 1705159 - 1705184 + G 70 -6.9 -4.07568 | gap 1, opp_overlap 1705159 1705160, overlap 1705159 TGGCCTCTACCAGAA G-CGTCATTAGC GCC GCTGGTGACGGC TTTTCAGACACAGAG TERM 2344 1705478 - 1705490 + G 72 -4.8 -4.70613 | CATGGCACCTTTTTC CGTG GTCAA CACG TTTTCTTGACGTTTT ynfI 1705009 - 1705623 + | twin-argninine leader-binding protein DmsD TERM 2345 1705600 - 1705612 + F 71 -9.1 -3.41073 | overlap 1705599 CTGTTGATTCCTGTC GCGGT TAA ACCGC TGTTTCGATAGGATC TERM 2346 1705987 - 1706013 + G 76 -7.9 -4.2704 | gap 1 GCGACGGCTGCTAAC CCCGGCGCTCGG CGGA CTG-GCGGCGGG TTTGTTGCTGATGGG TERM 2347 1706913 - 1706883 - g 77 -9.7 -3.64599 | opp_overlap 1706886, overlap 1706886 TGATGATATGTGAAA TGACCGGGGAGTA TCAGC TACTCCCCGGTTT ATTGATTGCCTGCGT TERM 2348 1706886 - 1706910 + G 100 -15.8 -4.33621 | opp_overlap 1706883 1706886 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG TERM 2349 1706910 - 1706886 - g 95 -15.8 -2.93585 | opp_overlap 1706886, overlap 1706883 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG ynfJ 1705820 - 1707001 + | putative voltage-gated ClC-type chloride channel ClcB ynfK 1707661 - 1706954 - | putative dithiobiotin synthetase mlc 1708994 - 1707774 - | putative NAGC-like transcriptional regulator TERM 2350 1708438 - 1708427 - G 72 -7.2 -4.19624 | opp_overlap 1708427 1708437 CATGCTGAATATAAA CCGG TACG CCGG TATGCTGCTCCAGCG TERM 2351 1708437 - 1708472 + g 72 -6.8 -4.21908 | gap 1, opp_overlap 1708427, overlap 1708427 1708441 ATAAACCGGTACGCC GGTATGCTGCTCCAGCG CCT CGCCG-AGCGGCATCTC TTTTACATCCTCGTA TERM 2352 1708732 - 1708706 - G 70 -4.4 -4.5287 | overlap 1708696 1708708 GCAAAGCAAGGAAAA TCTCCCCGCG ACTAATG CGCAGAGAAA GATAGTGCCAGGCTT ynfL 1710022 - 1709129 - | transcriptional regulator YnfL TERM 2353 1709965 - 1709940 - G 76 -11.1 -3.34398 | overlap 1709938 GGTGGTTGCGAAATA TTCAGGCGGGC AGCG GCACGCCCGAA ATGCAGCTCTTCTGC TERM 2354 1710235 - 1710249 + G 82 -7.8 -4.52589 | CGCCGCAATTTATGC GCGTCA CCC TGGCGC TTTTCTCTGCCGGAC TERM 2355 1710672 - 1710683 + G 74 -2.2 -5.08824 | overlap 1710668 CGCTTAATTAGCGGT GTCT TCAC GGAC TTTTTTAACTGGCGA ynfM 1710129 - 1711382 + | transport protein YnfM TERM 2356 1711423 - 1711388 - f 100 -12.1 -5.02074 | gap 2, opp_overlap 1711388 1711391 GCACGCCTGAAAAAA TAAGTCCGGACTGAGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2357 1711388 - 1711423 + F 81 -12.1 -3.09516 | gap 2, opp_overlap 1711388, overlap 1711391 GCACGCCTGAAAAAA TAAGTCCGGACTGAGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2358 1711391 - 1711420 + F 77 -9.4 -3.69395 | gap 2, opp_overlap 1711388, overlap 1711388 CGCCTGAAAAAATAA GTCCGGACTGAGGT AAAT ACC-C-GTCCGGAC TTATTGCCTGCTCAA TERM 2359 1711967 - 1711957 - g 72 -6.8 -4.17477 | overlap 1711958 1711960 AAAAAACAGCATAAA GCAG CAC CTGC CCAGAAAGCGCAGGC UTI89_C1784 1711780 - 1712115 + | acid shock protein precursor TERM 2360 1712159 - 1712191 + F 71 -8.4 -3.53444 | opp_overlap 1712158 1712161, overlap 1712160 CTCGCGCCTGAAAAT TACGGTGCTAAGCG GGTAA CGTTTAGCACCGCC TTTAGCGGAGGGTAG TERM 2361 1712160 - 1712190 + F 79 -11.9 -2.71924 | opp_overlap 1712158 1712161, overlap 1712159 TCGCGCCTGAAAATT ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC CTTTAGCGGAGGGTA TERM 2362 1712189 - 1712161 - f 86 -13.2 -3.08032 | opp_overlap 1712160 1712159, overlap 1712158 CGCGCCTGAAAATTA CGGTGCTAAGCG GGTAA CGTTTAGCACCG CCTTTAGCGGAGGGT UTI89_C1786 1712391 - 1713212 + | hypothetical protein TERM 2363 1713253 - 1713213 - T 85 -9.1 -4.40561 | gap 1, opp_overlap 1713219 1713221, overlap 1713210 1713221 CTGTCGCAAAAATAA TGTTCAA-ACGCTGCCCG ACAGCG CGGGCAGCGTGTTCATCA GGCAAGTTTCACCAT TERM 2364 1713219 - 1713246 + T 86 -12.7 -3.14463 | opp_overlap 1713210 1713213 1713221, overlap 1713221 CAAAAATAATGTTCA AACGCTGCCCG ACAGCG CGGGCAGCGTG TTCATCAGGCAAGTT TERM 2365 1713244 - 1713221 - T 100 -15.3 -3.65722 | opp_overlap 1713219 1713221, overlap 1713210 1713213 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TGTTCATCAGGCAAG TERM 2366 1713221 - 1713244 + T 100 -15.3 -3.13403 | opp_overlap 1713221 1713210 1713213, overlap 1713219 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TGTTCATCAGGCAAG ydgE 1713580 - 1713251 - | multidrug efflux system protein MdtI ydgF 1713932 - 1713567 - | multidrug efflux system protein MdtJ TERM 2367 1713757 - 1713769 + g 90 -4.7 -5.40072 | opp_overlap 1713758, overlap 1713758 CACAGCGCATAAGCT ACGCC TAA GGCGA TTTTTTTAACGGCGA TERM 2368 1713758 - 1713768 + g 72 -8.2 -3.83561 | opp_overlap 1713758, overlap 1713757 ACAGCGCATAAGCTA CGCC TAA GGCG ATTTTTTTAACGGCG TERM 2369 1714054 - 1714044 - H 72 -8.2 -3.92804 | overlap 1714045 GAAGAAAGGACTAAA GCGC GTT GCGC CAGTGCTGCTCACCT TERM 2370 1715212 - 1715227 + G 74 -3.2 -5.00765 | overlap 1715205 1715214 GCGTGGGCTGGGGCT TTCCAC ATTG GTGGTA TTTTTGTCGTTGATT tqsA 1714343 - 1715377 + | putative transport protein TERM 2371 1715401 - 1715372 - T 70 -6.3 -4.18488 | overlap 1715374 1715375 AGCGATCTCAATAAA GAGTGACGGCCTC CGCA GAGGCCGTCAGGG TTACAGAGCTTTCAG TERM 2372 1715399 - 1715374 - T 100 -13.3 -3.69068 | overlap 1715372 1715375 CGATCTCAATAAAGA GTGACGGCCTC CGCA GAGGCCGTCAG GGTTACAGAGCTTTC TERM 2373 1715398 - 1715375 - T 100 -16.8 -2.80958 | overlap 1715374 1715372 GATCTCAATAAAGAG TGACGGCCTC CGCA GAGGCCGTCA GGGTTACAGAGCTTT pntB 1716790 - 1715402 - | pyridine nucleotide transhydrogenase pntA 1718387 - 1716801 - | NAD(P) transhydrogenase subunit alpha TERM 2374 1719777 - 1719721 - g 70 -6 -4.15044 | gap 2, overlap 1719732 1719772 CGTGCCGCGAAGAAA GGTGCTAAGTATTACCACATCACCCGCC AGT GGCAGG-AACGTGGTAATAACCTG-ACC GTCAGCGCAGATCTG TERM 2375 1719767 - 1719732 - g 73 -12 -2.72855 | gap 1, overlap 1719721 GAAAGGTGCTAAGTA TTACCACATCACCCGCC AGT GGCAGG-AACGTGGTAA TAACCTGACCGTCAG UTI89_C1792 1718857 - 1719801 + | hypothetical protein TERM 2376 1719838 - 1719822 - f 80 -10.8 -3.31461 | opp_overlap 1719814 1719822 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2377 1719822 - 1719838 + F 85 -10.8 -3.81062 | opp_overlap 1719822, overlap 1719814 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2378 1720400 - 1720412 + G 73 -4.1 -4.77036 | TGCATCGACTTTATT GTGGA TTG TTCAC TTTTTGATCCTGCGC TERM 2379 1720706 - 1720716 + G 70 -4.6 -4.51743 | GCTGGCGGTTCTCTC CGCT CTG GGCG TTTATTTGCTGGTAA ydgI 1719987 - 1721369 + | putative arginine/ornithine antiporter TERM 2380 1721647 - 1721629 - g 75 -4.5 -4.81685 | opp_overlap 1721629, overlap 1721619 ATGAAGTACTAAAAA GCACCCA TGGTC TGCGTGC TATTTTGCATAACGC TERM 2381 1722062 - 1722042 - g 77 -8.3 -4.06419 | opp_overlap 1722042 1722046 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGCTGC TERM 2382 1722042 - 1722062 + G 76 -10.5 -3.34344 | opp_overlap 1722042, overlap 1722046 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGCTGC ydgB 1721406 - 1722128 + | short chain dehydrogenase ydgC 1722460 - 1722125 - | hypothetical protein rstA 1722529 - 1723308 + | DNA-binding transcriptional regulator RstA rstB 1723312 - 1724613 + | sensor protein RstB tus 1724677 - 1725618 + | DNA replication terminus site-binding protein fumC 1727018 - 1725615 - | fumarate hydratase TERM 2383 1726135 - 1726104 - G 76 -12.2 -2.50443 | gap 1, opp_overlap 1726103, overlap 1726103 TGAGATTTCACCAAT TCCGCAGCGCGGGCC AGA GGCCAGC-CAGCGGA CATCATTGGCAATTT TERM 2384 1727138 - 1727155 + r 71 -8.3 -3.48884 | opp_overlap 1727139, overlap 1727136 1727134 1727139 GTGCCATGTAAAAAA ACCGCCC CGAA GGGCGGC TCTGTTTATTTCACA TERM 2385 1727154 - 1727139 - R 100 -11.8 -5.47218 | opp_overlap 1727139 1727138 1727136 1727134 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC TERM 2386 1727139 - 1727154 + r 79 -11.8 -2.68607 | opp_overlap 1727139, overlap 1727138 1727136 1727134 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC fumA 1728807 - 1727161 - | fumarase A TERM 2387 1727781 - 1727796 + g 72 -4.7 -4.66163 | CCGGGATATATTTGC CTGGA TTATGT TCCAG TTTTTCGATCCAGAT TERM 2388 1728659 - 1728631 - G 72 -7.4 -3.97947 | overlap 1728646 CGGACGCAGCATAAA TGACGCATCATG AAACG CCTGACGCGCCA ACAGAGTTAACGCTT TERM 2389 1728741 - 1728759 + g 74 -2.4 -5.08824 | GTTCGCTGGTTAGCA GGTAATAC TCA GTATCATC TTTTTTGAGTGGAAA manA 1729006 - 1730181 + | mannose-6-phosphate isomerase TERM 2390 1730239 - 1730259 + F 100 -12.6 -4.27483 | opp_overlap 1730234 1730237 1730236 AGGCTTATAACACCT TCAGGCGG CCAGT CCGCCTGA TTTCATTTTATGGAT TERM 2391 1730809 - 1730792 - g 73 -4 -4.86773 | overlap 1730793 1730794 CAAAAGGATGAAAAA GTCGCC TTTAGC GGCGGC GAGTTCCAGTTAAAT TERM 2392 1731458 - 1731440 - g 74 -8.1 -4.04927 | gap 1 GCAACGACTAAAGAA GCGCC-GC AAAC GCTGGCGC AGGAAGTGGACCGCT ydgA 1730282 - 1731790 + | hypothetical protein TERM 2393 1731827 - 1731804 - T 100 -13.9 -4.24606 | opp_overlap 1731804 AATTCACAGCCAAAA CGCCGGAGA TTTTTC TCTCCGGCG TTTTTTCTTACTTCA TERM 2394 1731804 - 1731827 + T 100 -13.9 -5.5604 | opp_overlap 1731804 AATTCACAGCCAAAA CGCCGGAGA TTTTTC TCTCCGGCG TTTTTTCTTACTTCA uidC 1733100 - 1731835 - | putative outer membrane porin protein uidB 1734512 - 1733139 - | glucuronide transporter TERM 2395 1734058 - 1734092 + g 88 -12.1 -3.69395 | gap 1, opp_overlap 1734049 1734050, overlap 1734053 1734064 AATGAAGCGGCAATC CCGCGAGC-CGCGCCC AGAC GGGCGCGGGATTGTGG TTGTTGGGTCATCGC TERM 2396 1734064 - 1734085 + g 81 -12.9 -2.76171 | opp_overlap 1734050, overlap 1734053 1734058 GCGGCAATCCCGCGA GCCGCGCCC AGAC GGGCGCGGG ATTGTGGTTGTTGGG uidA 1736320 - 1734509 - | beta-D-glucuronidase TERM 2397 1734600 - 1734579 - G 70 -4.3 -4.46212 | opp_overlap 1734580, overlap 1734580 TTTTGCAGCAGAAAA GCCGCAGAC TTCG GTTTGCGGT CGCGAGTGAAGATCC TERM 2398 1735105 - 1735118 + g 73 -3.8 -4.82901 | opp_overlap 1735105, overlap 1735103 CAATACTCCACATCA CCAC GCTTGG GTGG TTTTTGTCACGCGCA TERM 2399 1736174 - 1736196 + g 72 -6.2 -4.30719 | opp_overlap 1736173 CTGATCGTTAAAACT GCCCGGCA CAGCAAT TGCCCGGC TTTCTTGTAACGCGC TERM 2400 1736382 - 1736396 + r 72 -8.6 -3.58726 | opp_overlap 1736381 ATTAGTTAACCAATT CTGTGT TGC ACACAG TTATCTGTGAGAAAC TERM 2401 1736694 - 1736668 - R 86 -10.9 -3.87318 | gap 1 AATTACGATATGAAA CGCGGGCTCAGT TGTC ACC-AGCCCGCG GAAAGAGAGAGAGGA uidR 1737300 - 1736710 - | repressor for uid operon TERM 2402 1737407 - 1737435 + r 95 -12.6 -3.65827 | gap 1, overlap 1737409 TTCGTAAGCTTTTTA TC-CGGCTATTGG TTAA CCAATAGCCGTGA TTTGGCTGCCAGTTG TERM 2403 1737409 - 1737432 + r 93 -15.4 -2.94144 | overlap 1737407 CGTAAGCTTTTTATC CGGCTATTGG TTAA CCAATAGCCG TGATTTGGCTGCCAG TERM 2404 1737486 - 1737516 + r 75 -9.8 -3.456 | opp_overlap 1737503 GTTGCACACGCTATC CCGGTAAACAAC ACATACG GCTGTTTACCGG TTCGTTAGTGTATTA hdhA 1738296 - 1737529 - | 7-alpha-hydroxysteroid dehydrogenase TERM 2405 1738346 - 1738330 - RH 82 -5.1 -5.3104 | opp_overlap 1738339 TCAGTAAAAATAAAA GGCAC CGCCTGT GTGCC ACATTTTTTATCATT TERM 2406 1738339 - 1738349 + rH 87 -5.4 -5.37345 | opp_overlap 1738330 ATAAAAGGCACCGCC TGTG TGC CACA TTTTTTATCATTAAC malI 1739436 - 1738408 - | DNA-binding transcriptional repressor MalI TERM 2407 1739978 - 1739968 - gH 72 -6.8 -4.24342 | TGGTTGACCAATAAA GGCA TTC TGCC AACCACGGACGCCGC malX 1739407 - 1741203 + | bifunctional maltose and glucose-specific PTS system components IICB malY 1741213 - 1742385 + | maltose regulon modulator TERM 2408 1742385 - 1742426 + F 89 -8.7 -4.652 | overlap 1742386 CCGCGCTGTTGGTTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA TTTTTACCCTGCTTT TERM 2409 1742386 - 1742425 + F 85 -12.2 -3.38036 | overlap 1742385 CGCGCTGTTGGTTAA CCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGG ATTTTTACCCTGCTT TERM 2410 1742766 - 1742746 - g 74 -11.1 -3.20387 | opp_overlap 1742745, overlap 1742744 TGAAAACATTGAAGA TGCAGCCCG TAA CGGCCTGCA CTATGTCGAGCTGCG TERM 2411 1743470 - 1743458 - g 75 -4.7 -4.80882 | AGCGCAGAGGAAAAA CGCGC ACT GCGAG AAAAAGTCGCCGCGA add 1742489 - 1743490 + | adenosine deaminase TERM 2412 1743497 - 1743521 + T 73 -10 -3.04398 | opp_overlap 1743497 1743498, overlap 1743496 GCGAAGTAACAAAAA TGGATGGTGC TAATT GCACCATCCC CTTTTCACGCAAGGC TERM 2413 1743521 - 1743497 - T 100 -10 -5.1963 | opp_overlap 1743497 1743496, overlap 1743498 GCGAAGTAACAAAAA TGGATGGTGC TAATT GCACCATCCC CTTTTCACGCAAGGC TERM 2414 1743520 - 1743498 - T 100 -13.5 -3.70694 | opp_overlap 1743497 1743496, overlap 1743497 CGAAGTAACAAAAAT GGATGGTGC TAATT GCACCATCC CCTTTTCACGCAAGG ydgJ 1744566 - 1743526 - | putative oxidoreductase UTI89_C1813 1744809 - 1744934 + | putative beta-lactam resistance protein TERM 2415 1744955 - 1744977 + F 73 -6.3 -4.3208 | gap 1 GCACTTGTTGAGCGA CATGCTGCCC GTCC GGGT-GCATG TTTTCACTTGTCGGA UTI89_C1814 1745023 - 1745286 + | hypothetical protein ydgT 1745207 - 1745422 + | oriC-binding nucleoid-associated protein TERM 2416 1745546 - 1745565 + G 75 -7 -4.3014 | overlap 1745550 TATTGGAGGCTGGTT GCTTGGCC CGTT GGCCTGGC TTTTAGTCGCTCTGT ydgK 1745484 - 1745948 + | hypothetical protein rnfA 1746025 - 1746606 + | Na(+)-translocating NADH-quinone reductase subunit E rnfB 1746606 - 1747184 + | electron transport complex protein RnfB TERM 2417 1747225 - 1747209 - g 87 -4.5 -5.28176 | overlap 1747215 TGCATTCAGAAAAAA TAAAATC TGG GATTTCA ACGGCGGCATCCATC TERM 2418 1747274 - 1747301 + G 100 -12.7 -4.54821 | overlap 1747276 AGTCCAACGGTACGC CCCTGCGCCAG GTACCA CTGGCGCAGCG TTTTGTCATTCCACT TERM 2419 1747276 - 1747299 + G 84 -13.9 -2.5882 | overlap 1747274 TCCAACGGTACGCCC CTGCGCCAG GTACCA CTGGCGCAG CGTTTTGTCATTCCA TERM 2420 1747690 - 1747676 - g 72 -8.6 -3.80142 | GAGATAAGATTGAAA CGTTGA TTA TCAACG CTGCTGAGTGCGAGC rnfC 1747177 - 1749303 + | electron transport complex protein RnfC TERM 2421 1749398 - 1749414 + G 79 -2.2 -5.27477 | opp_overlap 1749398, overlap 1749399 CAGCCGTGCCAGGAA TCGCAG CGCAA CTGTGG TTTTTTGGTTGGGGT TERM 2422 1750185 - 1750204 + G 70 -6.4 -4.17048 | overlap 1750184 1750187 CCCGGTTACCGCTTC TACGACCA ATCG TGGTCGTC TTATTTTCGGCGCGC TERM 2423 1750187 - 1750202 + G 73 -9 -3.68435 | overlap 1750184 1750185 CGGTTACCGCTTCTA CGACCA ATCG TGGTCG TCTTATTTTCGGCGC rnfD 1749304 - 1750362 + | electron transport complex protein RnfD rnfG 1750366 - 1750986 + | electron transport complex protein RnfG TERM 2424 1751380 - 1751356 - g 74 -3.4 -5.00616 | opp_overlap 1751356, overlap 1751357 TTCGCCGCCAAAAAA GGTCCGGCGC TTTCG GCACTGGACG GCTTTTCAATTGGTA TERM 2425 1751398 - 1751412 + G 72 -11.4 -2.50195 | overlap 1751397 1751394 1751399 TTTTCAATTGGTATG GGCGCA ACC TGCGCC ATGTTCGTGCTGGGT ydgQ 1750990 - 1751685 + | SoxR-reducing system protein RsxE nth 1751685 - 1752320 + | endonuclease III UTI89_C1824 1752448 - 1752648 + | hypothetical protein TERM 2426 1752972 - 1752952 - g 76 -4 -4.99134 | opp_overlap 1752956 1752962, overlap 1752957 1752962 ACTGCAAACCAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTTAAACAA TERM 2427 1753378 - 1753362 - g 76 -3.5 -4.91511 | opp_overlap 1753377 ATGCTATGAGAAAAA CGACCCG CGT CTGGACG GTGCATTCACCATGT tppB 1752931 - 1754433 + | putative tripeptide transporter permease TERM 2428 1754457 - 1754479 + F 100 -13.5 -6.09888 | opp_overlap 1754457 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTGTTCAGC TERM 2429 1754479 - 1754457 - f 100 -13.5 -3.30635 | opp_overlap 1754457 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTGTTCAGC TERM 2430 1754655 - 1754643 - g 84 -4.1 -5.28481 | GATTTAATGAAAAAA CGTCT CGA AAACG GTGACAATTACTTTG TERM 2431 1754828 - 1754818 - g 70 -5.4 -4.36914 | TTTCCCGCTATAAAA CCAT CGA ATGG CTGAATTACATCGCC gst 1754538 - 1755143 + | glutathionine S-transferase pdxY 1756050 - 1755187 - | pyridoxamine kinase TERM 2432 1755898 - 1755875 - G 78 -11 -3.54638 | opp_overlap 1755874 1755870 1755867 ACAATTTCGGTTAAA TGGCTGGGTG GCAT CACACAGCCA GTCCATTTGCCGTAT TERM 2433 1756096 - 1756067 - R 95 -10.7 -4.82901 | opp_overlap 1756070, overlap 1756068 1756070 TTCCCTGTATAAAAA CCAGGGGGAGTGA TTTC TCACTCCCCCTTT CCACTTAATGCATTA TERM 2434 1756095 - 1756068 - R 100 -14.2 -3.49419 | opp_overlap 1756070, overlap 1756067 1756070 TCCCTGTATAAAAAC CAGGGGGAGTGA TTTC TCACTCCCCCTT TCCACTTAATGCATT TERM 2435 1756093 - 1756070 - R 100 -16.8 -3.31915 | opp_overlap 1756070, overlap 1756068 1756067 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA TERM 2436 1756070 - 1756093 + r 100 -16.8 -3.67976 | opp_overlap 1756068 1756067 1756070 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA tyrS 1757395 - 1756109 - | tyrosyl-tRNA synthetase TERM 2437 1756491 - 1756508 + g 84 -4.1 -5.21506 | gap 1, overlap 1756488 1756492 AGCACATACTGGGCG C-GCGGTG CTT TACCGCTG TTTTTATCTTCTTCT TERM 2438 1756492 - 1756506 + g 76 -7.8 -4.20977 | overlap 1756488 1756491 GCACATACTGGGCGC GCGGTG CTT TACCGC TGTTTTTATCTTCTT pdxH 1758168 - 1757512 - | pyridoxamine 5'-phosphate oxidase TERM 2439 1757591 - 1757566 - G 73 -4 -4.83169 | gap 1 ACGCTGGTACAAAAA GCGGTCATGCA GGCGA TGC-TCACCGC CCTGCCAGAACTCAA TERM 2440 1757916 - 1757937 + g 81 -5.9 -4.78107 | gap 1, overlap 1757919 CTTTACGGCTGCCGA GGT-TGGTGT AAA ACACCATGCC TTTTTCGTCGTAATG TERM 2441 1758096 - 1758111 + g 72 -7.5 -3.93262 | overlap 1758108 CGGCGGGTAGATCGC GGCGG CGTAAC CCGCC TTTGGTGTATTCACG ydhA 1758556 - 1758227 - | lysozyme inhibitor anmK 1759763 - 1758654 - | anhydro-N-acetylmuramic acid kinase TERM 2442 1758780 - 1758818 + g 100 -16.8 -3.51924 | opp_overlap 1758794 CGCCAATGCTTCCAT GTCATCGCCACTAATGCC AAC GGCATCGGTGGTGGTGAC TTCTGTGCCTGGCAG slyB 1760037 - 1760504 + | outer membrane lipoprotein SlyB precursor TERM 2443 1760506 - 1760548 + T 72 -8.5 -3.63968 | gap 1, opp_overlap 1760509, overlap 1760498 1760509 TTTCCCCGCGCTAAA T-AAGTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCCTTCA TTTCACCCTTTGGCC TERM 2444 1760544 - 1760509 - T 93 -11.8 -3.90744 | opp_overlap 1760509 1760506 1760498 CCCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT TERM 2445 1760509 - 1760544 + T 88 -11.8 -3.5332 | opp_overlap 1760509, overlap 1760506 1760498 CCCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT slyA 1760991 - 1760551 - | transcriptional regulator SlyA ydhI 1761186 - 1761422 + | hypothetical protein TERM 2446 1762091 - 1762077 - gf 73 -4.2 -4.79955 | ATAGTGATAACAAAA CGTTAC AGG GTCACG TGTCCAGTATCGGTC ydhJ 1761383 - 1762282 + | hypothetical protein TERM 2447 1764201 - 1764222 + G 73 -11.5 -2.6914 | opp_overlap 1764200 1764199, overlap 1764200 1764202 CCGTCATCATCAACC TGCCGCCCG AGAA CTGGCGGCA ATTGTCTGGCGGCTG ydhK 1762282 - 1764294 + | hypothetical protein sodC 1764867 - 1764295 - | superoxide dismutase TERM 2448 1764332 - 1764342 + g 72 -8.2 -3.78329 | opp_overlap 1764313, overlap 1764335 TAGCGTTCACCGCCA CCGC CCA GCGG TTTGGGTTGATCGGA ydhF 1765793 - 1764897 - | oxidoreductase YdhF ydhL 1766219 - 1765842 - | hypothetical protein ydhM 1766184 - 1766783 + | hypothetical protein TERM 2449 1766770 - 1766789 + FH 82 -4.9 -5.24129 | overlap 1766771 AAAACATTATTGCGA CGCCTGC CGTTTA GCAGGCA TTTTTTATCACCAGA TERM 2450 1766771 - 1766788 + FH 75 -8.4 -3.73995 | overlap 1766770 AAACATTATTGCGAC GCCTGC CGTTTA GCAGGC ATTTTTTATCACCAG TERM 2451 1767045 - 1767021 - g 72 -7.2 -4.18018 | gap 1 TCTGCCCAGGCAAAA GGATACGCAGG TGCA CCTG-GCATCC ATAGCCCGGAACAAA nemA 1766820 - 1767917 + | N-ethylmaleimide reductase TERM 2452 1768276 - 1768263 - g 71 -2.3 -5.01732 | overlap 1768264 AAGCGTGCGAAAAAA TCCGT CAAA ACGGG GGTAACGTAACCCGT gloA 1767998 - 1768405 + | glyoxalase I TERM 2453 1768411 - 1768438 + F 75 -9.9 -3.46647 | gap 1, overlap 1768409 GGGCAACTAATCTCC TGCCGGGCGTGA ACTCA TCGCGCCCG-CA TCTTTACTGCATCGA TERM 2454 1768531 - 1768545 + G 77 -7.1 -4.45077 | opp_overlap 1768530 TAACGCTCAACTTAC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA rnt 1768508 - 1769155 + | ribonuclease T UTI89_C1844 1769248 - 1769391 + | hypothetical protein TERM 2455 1769515 - 1769482 - T 81 -9.6 -4.12532 | opp_overlap 1769485 1769505, overlap 1769485 TTGGGGATAGAGAAA GGACTGACGGATGC CCGTTC GCATCCGTCAGTAT TGCAGGACGGATTAT TERM 2456 1769485 - 1769512 + T 93 -15.7 -3.01791 | opp_overlap 1769485 1769482, overlap 1769505 GGGATAGAGAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT TERM 2457 1769512 - 1769485 - T 93 -15.7 -3.09116 | opp_overlap 1769485 1769505, overlap 1769482 GGGATAGAGAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT ydhD 1769874 - 1769527 - | hypothetical protein TERM 2458 1770515 - 1770504 - g 70 -3.6 -4.65078 | overlap 1770492 ACACCGTCAATAAAA CGGC CTCA GCCA ACTTTACCGAAAAGT TERM 2459 1770606 - 1770577 - g 90 -7.9 -4.81249 | gap 1 TGTGAAAGTCAAAAA TGCCGCGTCAGGAA CCC TTGCCGACGCG-CA CAAAGCGAAGGTGCA TERM 2460 1770639 - 1770626 - g 84 -8.1 -4.62471 | GCGAAGGTGCAAAAA GCCAC AAAA GTGGC AATGAATAAACTGAT ydhO 1770209 - 1771024 + | putative lipoprotein TERM 2461 1771057 - 1771027 - f 80 -9.2 -4.09511 | gap 1, opp_overlap 1771023 1771028 1771029, overlap 1771028 AACACTTCGCTAAAA CTTTACCCTGTTG TTACGG CAACAGGGT-AAG TTCATCTTTTGTCTC TERM 2462 1771057 - 1771028 - f 71 -9.4 -3.05224 | opp_overlap 1771023 1771028 1771029, overlap 1771027 ACACTTCGCTAAAAC TTTACCCTGTTG TTACGG CAACAGGGTAAG TTCATCTTTTGTCTC TERM 2463 1771028 - 1771057 + F 95 -12.3 -3.59432 | opp_overlap 1771027 1771028, overlap 1771023 1771029 ACACTTCGCTAAAAC TTTACCCTGTTGT TACG GCAACAGGGTAAG TTCATCTTTTGTCTC TERM 2464 1771029 - 1771056 + F 86 -13.6 -2.74575 | opp_overlap 1771027 1771028, overlap 1771028 1771023 CACTTCGCTAAAACT TTACCCTGTTGT TACG GCAACAGGGTAA GTTCATCTTTTGTCT sodB 1771152 - 1771733 + | superoxide dismutase TERM 2465 1771846 - 1771867 + T 100 -14.5 -5.38326 | opp_overlap 1771840 TGCCAGCAACTGTAA CGCAGAAGG TTAT CCTTCTGCG TTTTTGTTTAATTAG ydhP 1773048 - 1771879 - | putative transport protein TERM 2466 1772483 - 1772502 + g 73 -9.2 -3.68351 | TCTTTTTTCACTTCA GGTCGCGC CCCT GCGCCACC TTTAGGTAATGAGAA TERM 2467 1773165 - 1773131 - H 70 -3 -4.96276 | ACAAAAAAATGAAAA TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA ACAAACAGGAAGGAG TERM 2468 1773651 - 1773617 - g 79 -4.4 -4.90079 | gap 1, opp_overlap 1773617, overlap 1773619 ATGGCAACAATAAAA GATGTAGC-GAAACG AGCAAA CGTTTCCACTACAAC TGTGTCACACGTGAT TERM 2469 1773699 - 1773675 - g 91 -9.3 -4.71828 | overlap 1773696 ACGTGATCAACAAAA CACGTTTCGTC GCT GAAGAAACGCG CAATGCCGTGTGGGC TERM 2470 1774176 - 1774197 + G 81 -8.7 -4.37092 | gap 1, opp_overlap 1774176 1774174 CGCTGGAACGTAACA CCGGCGCAGG CCG CCT-TGCCGG TTTTATGAAGGCGAT TERM 2471 1774500 - 1774484 - g 70 -6.5 -4.21462 | overlap 1774486 ATCCATCAGCCAAAA GATTCGC TGG GCGAAAC AGCGTTCAACATGCT purR 1773602 - 1774627 + | DNA-binding transcriptional repressor PurR ydhB 1775556 - 1774624 - | putative DNA-binding transcriptional regulator TERM 2472 1775428 - 1775415 - G 70 -4.5 -4.57073 | gap 1, overlap 1775396 1775416 GACGTCGTTCAAAAA GC-GGC ACC GCCAGC CACTCTTCCAGCTGA ydhC 1775669 - 1776880 + | inner membrane transport protein YdhC cfa 1777171 - 1778319 + | cyclopropane fatty acyl phospholipid synthase TERM 2473 1778331 - 1778351 + T 100 -14 -3.60475 | opp_overlap 1778321 CTAAAGGCTATTCTA TCGCCCCC TCTCC GGGGGCGA TTTCAGATCAGGCTT ribC 1779000 - 1778359 - | riboflavin synthase subunit alpha TERM 2474 1779157 - 1779174 + H 80 -6.2 -4.85129 | overlap 1779172 CTGCTTCTTCTTTTT GCTGCC CATTCA GGCGGC TTTTTAGTCTCTCAT ydhE 1779215 - 1780588 + | multidrug efflux protein TERM 2475 1780595 - 1780625 + T 100 -12.7 -4.57073 | gap 1, opp_overlap 1780598, overlap 1780598 GCTCGCTAGTAAAGA CA-AGGCGCAACCT TCAC GGGTTGCGCCTGTG TTTTTACGCAGGCTG TERM 2476 1780621 - 1780598 - T 100 -13.9 -3.86252 | opp_overlap 1780595 1780598 CGCTAGTAAAGACAA GGCGCAACC TTCACG GGTTGCGCC TGTGTTTTTACGCAG TERM 2477 1780598 - 1780621 + T 100 -14.6 -3.53855 | opp_overlap 1780598, overlap 1780595 CGCTAGTAAAGACAA GGCGCAACCT TCAC GGGTTGCGCC TGTGTTTTTACGCAG ydhQ 1781885 - 1780629 - | hypothetical protein TERM 2478 1782063 - 1782052 - H 71 -2.2 -5.07486 | overlap 1782035 GATCCTGAATAAAAA TCGC CCTT GCAA ATCAACAAAATATAG TERM 2479 1782322 - 1782353 + H 80 -6.7 -4.76075 | gap 2, overlap 1782347 1782349 TTGACATGGTGGGGG TC-GGTG-GTTCGAG TCCA CTCGGACGCACCAGA TTTTCTTAATCTGGT TERM 2480 1782609 - 1782621 + G 83 -5.5 -5.1356 | opp_overlap 1782599 AAGAACCACGAAGCC GGTGG GAT CTACC TTTTTATTAATGAAA UTI89_C1859 1782459 - 1782764 + | hypothetical protein TERM 2481 1782764 - 1782746 - f 75 -9.6 -3.54676 | opp_overlap 1782742, overlap 1782742 ACTTAGTCAAATCAA TCAGGCAA AAC TCGCCTGA CAGAATTTAATCAAG TERM 2482 1782793 - 1782779 - f 71 -8.5 -3.42379 | opp_overlap 1782779 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTTATCCCTGTCT TERM 2483 1782779 - 1782793 + F 91 -8.5 -4.90455 | opp_overlap 1782779 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTTATCCCTGTCT TERM 2484 1783049 - 1783065 + G 72 -10.9 -3.05844 | opp_overlap 1783047 1783044 AACTCAAAACTGATG CTGGCAA ACA TTGCCAG TATTGAAATACCGCC TERM 2485 1784300 - 1784283 - g 72 -4.9 -4.6391 | gap 1, opp_overlap 1784286, overlap 1784286 AACAATTACAGAAAA CAGGGGAT GAA ATCCC-TG ATGTTGGCGAAGATT ydhS 1782890 - 1784494 + | hypothetical protein ydhT 1785318 - 1784506 - | hypothetical protein ydhU 1786107 - 1785322 - | YdhU (PhsC)-like protein UTI89_C1863 1786823 - 1786104 - | putative oxidoreductase Fe-S subunit ydhW 1787483 - 1786836 - | hypothetical protein ydhV 1789589 - 1787487 - | putative oxidoreductase TERM 2486 1787580 - 1787593 + g 70 -4.5 -4.55295 | opp_overlap 1787576, overlap 1787575 CGGACAACCAAGCTG TGGGT CCCA GCCCA TTTCTTTGTAGAACA TERM 2487 1788663 - 1788679 + g 81 -6.5 -4.87037 | opp_overlap 1788666, overlap 1788664 ACAACGGATCGGGCA AGAGTGG CAG CCACTCA TTTTTACTGTGTATT TERM 2488 1788664 - 1788678 + g 74 -10 -3.50595 | opp_overlap 1788666, overlap 1788663 CAACGGATCGGGCAA GAGTGG CAG CCACTC ATTTTTACTGTGTAT TERM 2489 1789313 - 1789299 - G 76 -4.2 -5.00616 | TTGCGCTGCAAAAAA GCCC CCCATAT GGGC ATCGACGACTAAATT ydhY 1790236 - 1789610 - | hypothetical protein TERM 2490 1790421 - 1790411 - R 76 -2.6 -5.31275 | opp_overlap 1790411 GGTTAGGAGAAAAAA TAAT GTG ATTA TTCTGGGCTCTTAAC TERM 2491 1790688 - 1790657 - R 77 -8.9 -3.83675 | gap 1, opp_overlap 1790654, overlap 1790659 CAACTGAAGCAAGAA TATCAGGATGAAGC TTACC GCCTCATCCTGA-A TGGTCATTTTACCAG TERM 2492 1790687 - 1790659 - R 100 -14 -3.4945 | opp_overlap 1790654, overlap 1790657 ACTGAAGCAAGAATA TCAGGATGAAGC TTACC GCCTCATCCTGA ATGGTCATTTTACCA ydhZ 1790901 - 1790692 - | hypothetical protein TERM 2493 1792418 - 1792430 + G 81 -9.1 -4.08706 | opp_overlap 1792417 1792415 1792418 GCAAAAGGTAAATAC CCGCT GGA AGCGG TTTCTATCATGGCGA pykF 1791242 - 1792870 + | pyruvate kinase TERM 2494 1792918 - 1792903 - f 81 -11.8 -3.12847 | opp_overlap 1792903 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2495 1792903 - 1792918 + F 100 -11.8 -5.99154 | opp_overlap 1792903 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2496 1793343 - 1793318 - g 70 -9.7 -3.17212 | gap 1 TGACCAGCTGAGCAA CGACGTGAACGC AAT GCGTTC-CGACG TTCAGGCTGCTAAAG lpp 1793181 - 1793417 + | murein lipoprotein TERM 2497 1793457 - 1793439 - T 100 -14.6 -4.74103 | opp_overlap 1793439 CTGTGAAGTGAAAAA TGGCGCAC GAT GTGCGCCA TTTTTTTGCCTGCTA TERM 2498 1793439 - 1793457 + T 100 -14.6 -5.48825 | opp_overlap 1793439 CTGTGAAGTGAAAAA TGGCGCAC GAT GTGCGCCA TTTTTTTGCCTGCTA ynhG 1794484 - 1793480 - | hypothetical protein TERM 2499 1794314 - 1794335 + g 71 -2.1 -4.88388 | opp_overlap 1794315 1794317, overlap 1794315 TGCCGCAGTATCAAA ACGTCGGGC GATG GCCTGAAGG TTTTTATCCCCTTCT sufE 1795049 - 1794633 - | cysteine desufuration protein SufE TERM 2500 1794839 - 1794795 - G 74 -6.3 -4.57581 | opp_overlap 1794815 1794821 ATCGTAAAGAATAAA GACGACCGCAATAAGCCCTTT TAC AATGGCCGCATCGCTGTCGCC ATGTAATTCAATAAT sufS 1796282 - 1795062 - | selenocysteine lyase TERM 2501 1795729 - 1795740 + g 74 -5.8 -4.52589 | GCAAGTGTGATCATC TCCG CCAG CGGA TTTTCTGTCCCAAGC sufD 1797550 - 1796279 - | cysteine desulfurase activator complex subunit SufD sufC 1798271 - 1797525 - | cysteine desulfurase ATPase component sufB 1799807 - 1798281 - | cysteine desulfurase activator complex subunit SufB TERM 2502 1799429 - 1799418 - GR 82 -7.2 -4.65895 | opp_overlap 1799417 CTCTTTACTTAAAAA GGCG TTCG CGCC AGTTTGCTGCACCGC sufA 1800145 - 1799777 - | iron-sulfur cluster assembly scaffold protein TERM 2503 1800468 - 1800438 - R 100 -17 -5.05116 | opp_overlap 1800438 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG TERM 2504 1800438 - 1800468 + r 100 -19.2 -3.86897 | opp_overlap 1800438 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG ydiH 1800963 - 1800694 - | hypothetical protein TERM 2505 1800939 - 1800904 - G 74 -9.8 -3.48276 | overlap 1800906 1800907 CTCGCTTTTAGACAA GACCTGCACAGTATAC CACC GTTTACTGTGCAGATA ATAACCAAAAGCAAT TERM 2506 1800937 - 1800906 - G 83 -12.4 -3.31726 | overlap 1800904 1800907 CGCTTTTAGACAAGA CCTGCACAGTATAC CACC GTTTACTGTGCAGA TAATAACCAAAAGCA TERM 2507 1800936 - 1800907 - G 84 -13.7 -2.58822 | overlap 1800906 1800904 GCTTTTAGACAAGAC CTGCACAGTATAC CACC GTTTACTGTGCAG ATAATAACCAAAAGC ydiI 1801392 - 1800982 - | hypothetical protein ydiJ 1804445 - 1801389 - | hypothetical protein TERM 2508 1802931 - 1802913 - G 81 -4.5 -5.14563 | opp_overlap 1802922 TTCCTCACCAAAAAA CGCCG GGCTGTATT CGGCG CGAAAACCTTTGCCG ydiK 1804659 - 1805771 + | putative inner membrane protein TERM 2509 1805779 - 1805799 + F 100 -16.9 -3.62775 | opp_overlap 1805772 1805773 ATAAGTAATTTCTCA TCAGGCGGC TCT GCCGCCTGA TTGTTAACCCCTGCT TERM 2510 1806035 - 1806054 + F 100 -9.3 -5.82388 | CTGTGTGTAGTCTTT GCCCATC TCCCAC GATGGGC TTTTTTTTAACATTT ydiL 1806173 - 1806556 + | hypothetical protein ydiM 1806656 - 1807870 + | transport protein YdiM ydiN 1808091 - 1809362 + | transport protein YdiN TERM 2511 1809837 - 1809825 - g 70 -3.5 -4.66535 | opp_overlap 1809813 AAGGTTTAAAAGAAA TTAAA CTC TTTAA CCGTCGGGATGAGTT ydiB 1809374 - 1810240 + | quinate/shikimate dehydrogenase TERM 2512 1810976 - 1810961 - g 91 -5.4 -5.40072 | gap 1 GGTGCGGTAAAAAAA GCCTCTG CGC CAG-GGC AAATCTCGGTAAATG aroD 1810271 - 1811029 + | 3-dehydroquinate dehydratase TERM 2513 1811070 - 1811037 - f 81 -9.6 -3.86312 | overlap 1811040 AGGCATAAGCAATAA TATTTCGGCGGGAA TACCCT CCCCCGCCGAACTA AAAAAAGTATTTTTA TERM 2514 1811067 - 1811040 - f 77 -11.3 -2.70018 | overlap 1811037 CATAAGCAATAATAT TTCGGCGGGAA TACCCT CCCCCGCCGAA CTAAAAAAAGTATTT TERM 2515 1812554 - 1812541 - g 81 -6.7 -4.62069 | opp_overlap 1812547, overlap 1812543 CTTTCAGTGGAAAAA TCGCT CTCA AGCGA GGGCTGGATGTTCGT ydiF 1811175 - 1812770 + | hypothetical protein TERM 2516 1812900 - 1812888 - g 70 -6.2 -4.2558 | overlap 1812897 CACCTGCGATCAAAA CGGG ACATA CCCG CGTGAGTTTATGCGG ydiO 1812784 - 1813935 + | putative acyl-CoA dehydrogenase TERM 2517 1813940 - 1813975 + T 72 -10.4 -2.91276 | opp_overlap 1813937 1813933 1813929, overlap 1813939 AGAACAAATAATCTG CAGGCGGCGCAG CCTCTTAACAAA CTGCGCCGCCAG ATTTATCCGGCAAGA ydiP 1814889 - 1813978 - | transcriptional regulator YdiP TERM 2518 1814954 - 1814922 - R 91 -6.3 -5.34309 | opp_overlap 1814929 1814953, overlap 1814930 ATGAGCAAACAAAAA CAATATATGCCGGAT AAA ATACGGCGTGTATTG CGGTTATACAACCGC UTI89_C1889 1815168 - 1814992 - | hypothetical protein TERM 2519 1815350 - 1815331 - g 72 -10.8 -3.07994 | CTCAATGCCATTGAA GTTGCAAG CCAG CTTGCAAC AGATGACGATGAGAT ydiQ 1815205 - 1815969 + | putative electron transfer flavoprotein YdiQ ydiR 1815989 - 1816927 + | electron transfer flavoprotein subunit YdiR ydiS 1816982 - 1818271 + | hypothetical protein ydiT 1818268 - 1818561 + | ferredoxin-like protein YdiT TERM 2520 1818572 - 1818597 + G 84 -11.2 -3.81755 | gap 1, overlap 1818574 GCTAATCATGCATCC CA-CAGGCCCG CATCT CGGGCCTGATG TTCTGTTTCGAGAGT TERM 2521 1818574 - 1818594 + G 84 -14 -2.69057 | overlap 1818572 TAATCATGCATCCCA CAGGCCCG CATCT CGGGCCTG ATGTTCTGTTTCGAG TERM 2522 1818754 - 1818739 - g 72 -5.4 -4.54047 | CGATGCCAGACAAAA TTGCCG TGGT CGACAA TCATGGTGCAACGTA TERM 2523 1819463 - 1819475 + G 91 -10.5 -4.16904 | TTGCACCTGTATGCT CGGCG CAA CGCCG TTTGTCTATGATCTT ydiD 1818564 - 1820264 + | short chain acyl-CoA synthetase TERM 2524 1820284 - 1820318 + T 76 -4.1 -5.10665 | opp_overlap 1820290, overlap 1820288 1820290 CATCTTCGGGGATCA CATAAACCCGGCGAC AAAAC GCCGCCGGGTATTTA TTTTATTTCTTCAGT TERM 2525 1820288 - 1820314 + T 93 -9.3 -5.02645 | opp_overlap 1820290, overlap 1820284 1820290 TTCGGGGATCACATA AACCCGGCGAC AAAAC GCCGCCGGGTA TTTATTTTATTTCTT TERM 2526 1820290 - 1820312 + T 93 -11.9 -4.08474 | opp_overlap 1820290, overlap 1820288 1820284 CGGGGATCACATAAA CCCGGCGAC AAAAC GCCGCCGGG TATTTATTTTATTTC TERM 2527 1820312 - 1820290 - T 100 -14.8 -4.08706 | opp_overlap 1820288 1820284 1820290 CGGGGATCACATAAA CCCGGCGACA AAA CGCCGCCGGG TATTTATTTTATTTC ppsA 1822699 - 1820321 - | phosphoenolpyruvate synthase TERM 2528 1821011 - 1820993 - G 78 -8 -4.36914 | opp_overlap 1820992, overlap 1820977 1820974 GCGCTTCGGATAAAA CGCGGCAC CCA GCGTCGCG ATCCCTTCAGTCAGA ydiA 1823032 - 1823865 + | hypothetical protein TERM 2529 1823852 - 1823882 + F 81 -9.9 -4.05512 | gap 1, opp_overlap 1823862 TCATGGGCCTTAGCC GCCGAATGTACTAG AGAA CTAGTGCATT-GGC TTACTTTTTTGTTAT TERM 2530 1824676 - 1824663 - g 86 -6.7 -4.96848 | opp_overlap 1824663, overlap 1824665 CTCGCCAGACAAAAA TGGTC AGAT GACCA TCTATCAGACCAGCG aroH 1824022 - 1825068 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2531 1825074 - 1825097 + F 100 -13.2 -3.86822 | TCGCTTCTGAATGCG TGCCCATTCC TGAC GGGATGGGCA TTTCTGCGCAACTTG ydiE 1825173 - 1825391 + | hypothetical protein ydiU 1826831 - 1825395 - | hypothetical protein ydiV 1827607 - 1826894 - | hypothetical protein TERM 2532 1827815 - 1827841 + r 100 -21 -4.60487 | opp_overlap 1827815 GTATTCAGGAGTAAA TGGACGGCGATG TAT CATCGCCGTCCA TTTTTCGACATACTA TERM 2533 1827841 - 1827815 - R 100 -21 -3.79747 | opp_overlap 1827815 GTATTCAGGAGTAAA TGGACGGCGATG TAT CATCGCCGTCCA TTTTTCGACATACTA nlpC 1828318 - 1827854 - | lipoprotein NlpC TERM 2534 1828025 - 1828010 - G 72 -5.4 -4.56775 | gap 1, overlap 1828012 ACCCGTTTTGAAAAA GACCAGG TCA CCTGG-C AGCAACTCGTCTTTA TERM 2535 1828024 - 1828012 - G 78 -9.1 -3.90048 | overlap 1828010 CCGTTTTGAAAAAGA CCAGG TCA CCTGG CAGCAACTCGTCTTT btuD 1829145 - 1828396 - | vitamin B12-transporter ATPase btuE 1829696 - 1829145 - | putative glutathione peroxidase btuC 1830738 - 1829758 - | vtamin B12-transporter permease TERM 2536 1830807 - 1830821 + r 100 -12.8 -4.88407 | opp_overlap 1830807 AGTGAAAAGAAAAAA GGCCGC AGA GCGGCC TTTTTAGTTAGATCA TERM 2537 1830821 - 1830807 - R 100 -12.8 -5.80951 | opp_overlap 1830807 AGTGAAAAGAAAAAA GGCCGC AGA GCGGCC TTTTTAGTTAGATCA ihfA 1831138 - 1830839 - | integration host factor subunit alpha pheT 1833530 - 1831143 - | phenylalanyl-tRNA synthetase subunit beta pheS 1834528 - 1833545 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2538 1834411 - 1834423 + g 71 -2.6 -5.0133 | GGGTCGTCATCTGAA GGGT TAAGT GCCC TTTTTTACCCAAATA TERM 2539 1834699 - 1834714 + G 100 -6.1 -5.61881 | opp_overlap 1834698 GGCTGCGACAATTAC GCCTG ATGAGA CAGGC TTTTTATTTTTCAAA TERM 2540 1834747 - 1834762 + G 74 -10.4 -3.55815 | opp_overlap 1834747 GCGCATACAAAAAAA GCCTCC ACTG GGAGGC TTTCAGGCGCTGTTT TERM 2541 1834762 - 1834747 - g 100 -10.4 -5.71712 | opp_overlap 1834747 GCGCATACAAAAAAA GCCTCC ACTG GGAGGC TTTCAGGCGCTGTTT UTI89_C1908 1834608 - 1834916 + | hypothetical protein TERM 2542 1834949 - 1834967 + T 78 -10.3 -3.62418 | opp_overlap 1834949 GCGTTGAAACGAAAA GAGGGAG ACTAG CTCCCTC TTTCAACTGGCTTAT TERM 2543 1834967 - 1834949 - T 89 -10.3 -4.54727 | opp_overlap 1834949 GCGTTGAAACGAAAA GAGGGAG ACTAG CTCCCTC TTTCAACTGGCTTAT rplT 1835335 - 1834979 - | 50S ribosomal protein L20 rpmI 1835585 - 1835388 - | 50S ribosomal protein L35 TERM 2544 1835673 - 1835627 - R 74 -5.9 -4.66537 | gap 1, opp_overlap 1835632, overlap 1835623 1835636 AATAAACGAAACAAA GGCGAACAATGCCTGTGAAGCC CAAA GGCTCCACAGACAGTGCT-ACT TGAAGGCCTTACTGT TERM 2545 1835665 - 1835636 - R 100 -15.1 -3.72593 | opp_overlap 1835632, overlap 1835623 1835627 AACAAAGGCGAACAA TGCCTGTGAAGCC CAAA GGCTCCACAGACA GTGCTACTTGAAGGC infC 1836116 - 1835682 - | translation initiation factor IF-3 TERM 2546 1835824 - 1835848 + g 72 -6.4 -4.39571 | gap 1 TGCTGGTGCGCCATC TCACGACCGCG GAAA CGCAG-CGTGA TTTTGGCTTTATCAC thrS 1838156 - 1836228 - | threonyl-tRNA synthetase TERM 2547 1837227 - 1837237 + g 71 -2.4 -5.00616 | ATCTTTGTAGTTGTC CCAG TGA CCGG TTTTTTCCCACAGGA TERM 2548 1837428 - 1837442 + g 73 -9.2 -3.62522 | ACCGATTTTACGGTG GTCGCG TTT CGCGGC TTCTTCCAGGCGTTG TERM 2549 1837465 - 1837475 + g 90 -4.6 -5.36441 | AGGCGTTGCAGGTAA GCGT TAA GCGC TTTTTTGTCTGCCCA TERM 2550 1838986 - 1838976 - g 86 -4 -5.34555 | opp_overlap 1838976 TTACACTATAAAAAA GAAA TCA TTTC CTTATTTCTGGAAAC UTI89_C1913 1838679 - 1839113 + | hypothetical protein UTI89_C1914 1839225 - 1839602 + | hypothetical protein TERM 2551 1840033 - 1840005 - T 95 -10.9 -4.62475 | opp_overlap 1840004, overlap 1840007 AGTGACAAACGAAAA CAGCCAGACCGCA TAA CACGGTCCGGCAG ATAATTTTACATGCT TERM 2552 1840031 - 1840007 - T 93 -12.1 -3.91676 | opp_overlap 1840004, overlap 1840005 TGACAAACGAAAACA GCCAGACCGCA TAA CACGGTCCGGC AGATAATTTTACATG ydiY 1840798 - 1840040 - | hypothetical protein TERM 2553 1840278 - 1840290 + g 73 -9.1 -3.67141 | opp_overlap 1840264, overlap 1840263 GCCCCGGAGGCATAG CCCAG CGG CTGGG TTTCACTGGCATTGT TERM 2554 1840665 - 1840675 + g 83 -5.4 -5.03314 | opp_overlap 1840665 CCTGCGTTCAGATTA CCTT CGA AAGG TTTTTTAGCGCTGGC TERM 2555 1840842 - 1840826 - H 100 -6.5 -5.88565 | CGTACAACAAAAAAA GAGACCA TCG CGGTCCC GGAAACTTTCTTAAG pfkB 1841081 - 1842013 + | 6-phosphofructokinase 2 TERM 2556 1842043 - 1842020 - Tf 84 -6.7 -5.06414 | overlap 1842022 TCCCGCTAACAAAAA CATTCCCCC TGCATT GGGGGAATC ACCACCAACCTGTCG TERM 2557 1842041 - 1842022 - Tf 82 -9.3 -4.16307 | overlap 1842020 CCGCTAACAAAAACA TTCCCCC TGCATT GGGGGAA TCACCACCAACCTGT UTI89_C1917 1842419 - 1842042 - | hypothetical protein ydiZ 1842114 - 1842404 + | hypothetical protein TERM 2558 1842806 - 1842818 + G 90 -9.1 -4.48713 | ACCTCGCCCGCTGGA TGCGC ATA GCGCA TTTATTCTTGGTCAG yniA 1842510 - 1843370 + | hypothetical protein TERM 2559 1843388 - 1843404 + T 90 -10.8 -4.43477 | opp_overlap 1843387 1843388 TGGGTTGAGGATAAT GGCCGC TCCGT GCGGCC TTTTGATTAAATAAA TERM 2560 1843404 - 1843388 - T 74 -10.8 -2.64099 | opp_overlap 1843388, overlap 1843387 TGGGTTGAGGATAAT GGCCGC TCCGT GCGGCC TTTTGATTAAATAAA yniB 1843947 - 1843411 - | hypothetical protein TERM 2561 1843685 - 1843665 - G 81 -6.1 -4.84359 | overlap 1843668 CCAGTCCGACAAAAA TCAGGATGA AAA TCACCCAGA ACATAACGTTCACGC TERM 2562 1843762 - 1843751 - G 90 -7.2 -5.15381 | AACACATTCAAAAAA GGCG TATT CGCC TGCATCATATCGATC yniC 1844094 - 1844762 + | 2-deoxyglucose-6-phosphatase TERM 2563 1844794 - 1844766 - f 93 -15.4 -2.70932 | gap 1, opp_overlap 1844766 1844770 CTTCTCGGTTAATGA CCAGGGGGCAGTG ATCG CACTGCCCC-TGG TTCTTTATCTGAATT TERM 2564 1844766 - 1844794 + F 100 -15.4 -4.16301 | gap 1, opp_overlap 1844766, overlap 1844770 CTTCTCGGTTAATGA CCAGGGGGCAGTG ATCG CACTGCCCC-TGG TTCTTTATCTGAATT TERM 2565 1844770 - 1844791 + F 100 -15.9 -3.09322 | opp_overlap 1844766, overlap 1844766 TCGGTTAATGACCAG GGGGCAGTG ATCG CACTGCCCC TGGTTCTTTATCTGA TERM 2566 1844916 - 1844887 - f 73 -4.3 -4.85599 | gap 1, opp_overlap 1844889 1844894, overlap 1844889 TGCACTGTATAAAAA CCCTATACTGTACG TAT CG-ACAGTTTAGTG AGTTTTATCATGACG TERM 2567 1844934 - 1844949 + G 73 -4 -4.74767 | gap 1, overlap 1844935 TTTTATCATGACGGC G-GAAGG TCA CCTTCTC TTTTCTATTGCTTGT TERM 2568 1844935 - 1844947 + G 72 -7.7 -3.97283 | overlap 1844934 TTTATCATGACGGCG GAAGG TCA CCTTC TCTTTTCTATTGCTT UTI89_C1922 1844926 - 1845516 + | hypothetical protein TERM 2569 1845532 - 1845520 - f 76 -5.5 -4.87626 | opp_overlap 1845520, overlap 1845513 GTTGAATACTAAAAA GGCAA AAA TCGCC TTTCTGGAATAAGCA TERM 2570 1846208 - 1846222 + G 70 -3.6 -4.59853 | CCAATCCGACGTCAA TTATCA GCG TGGTAA TTTTTGCCGCATTCC ydjN 1845649 - 1847040 + | symporter protein YdjN TERM 2571 1847061 - 1847081 + T 100 -9 -5.95946 | opp_overlap 1847061 ATTTGTTACGTTAAA CGCCTGTC ATCCC GACAGGTG TTTTTTTATTCTTCG cedA 1847350 - 1847087 - | cell division modulator TERM 2572 1848952 - 1848974 + G 76 -7.6 -4.21194 | opp_overlap 1848936 1848937 1848952 1848950 TGGCCGCGCGAAACA CCGCCGGG GCCGAAA CGCGGCGG TTTTGAATCATACCA katE 1847533 - 1849794 + | hydroperoxidase II TERM 2573 1849835 - 1849796 - T 81 -10.8 -3.5394 | gap 1, opp_overlap 1849796 1849797, overlap 1849798 1849805 AAATCCCGGCGTAAA TATGGATAAGGTCACGCCC CTG GGGAGTGACCTTA-CCACC TTACTTACACATCAT TERM 2574 1849797 - 1849834 + T 79 -12.1 -2.60723 | gap 1, opp_overlap 1849796 1849798 1849805, overlap 1849796 AATCCCGGCGTAAAT ATGGATAAGGTCACGCCC CTG GGGAGTGACCTTA-CCAC CTTACTTACACATCA TERM 2575 1849833 - 1849798 - T 100 -15.6 -3.34517 | gap 1, opp_overlap 1849797 1849796, overlap 1849796 1849805 ATCCCGGCGTAAATA TGGATAAGGTCACGCCC CTG GGGAGTGACCTTA-CCA CCTTACTTACACATC TERM 2576 1849827 - 1849805 - T 100 -13.4 -3.452 | opp_overlap 1849797 1849796, overlap 1849798 1849796 CGTAAATATGGATAA GGTCACGCCC CTG GGGAGTGACC TTACCACCTTACTTA ydjC 1850598 - 1849840 - | hypothetical protein celF 1852032 - 1850611 - | 6-phospho-beta-glucosidase celD 1852909 - 1852067 - | DNA-binding transcriptional regulator ChbR TERM 2577 1852643 - 1852613 - G 79 -4.7 -5.00884 | ATGCTGCTCAAAAAA GCGTTTACTGATC CCAAC GTTCAATATACGC GTGGCACCAAATTCA TERM 2578 1852800 - 1852812 + g 71 -3.4 -4.79352 | TGCTGATGCAGTCCG CTGA TACTC TCAG TTTTATTGTAGATAA celC 1853267 - 1852917 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 2579 1853094 - 1853113 + g 70 -3.6 -4.72272 | gap 1 TTCATTCAATGCCAT CCGTGACTG ATC CA-TCATGG TTTTTGCTGCGGCAA celB 1854676 - 1853318 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC TERM 2580 1854715 - 1854696 - R 74 -7.9 -4.11773 | opp_overlap 1854690 1854696 AAATACCCTTTAAAA CCGCAAT TTAAAT ATTGCGG TATTGATTTATGAAA celA 1855081 - 1854761 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB UTI89_C1932 1855362 - 1855102 - | hypothetical protein TERM 2581 1855345 - 1855330 - G 100 -7.5 -5.79526 | opp_overlap 1855330 ACAGGCCAAAAAAAA CCGGC GCAATG GCCGG TTTCCGTTGTTACTC TERM 2582 1855330 - 1855345 + g 72 -7.5 -3.8646 | opp_overlap 1855330 ACAGGCCAAAAAAAA CCGGC GCAATG GCCGG TTTCCGTTGTTACTC osmE 1855718 - 1855380 - | DNA-binding transcriptional activator OsmE TERM 2583 1856661 - 1856645 - g 71 -3 -4.74103 | gap 1 TCTGGAAGGGAAAAA CGTACCT GAAC AGGT-CG CCAGAACAATAGAGA nadE 1855920 - 1856747 + | NAD synthetase TERM 2584 1856819 - 1856778 - f 89 -10.1 -4.56597 | opp_overlap 1856784 GGTTTGTGCGAAAAA GAGTACTTTGTTCACGCCG GATG CGGCGTGAACGCCTTACTC GACCTACAAAACTAT TERM 2585 1857317 - 1857301 - g 70 -6.5 -4.16016 | opp_overlap 1857306 CCACTGTTTAATAAA CGCTTGC GGC GCAATCG CCAGCTCTGTGCCCT ydjQ 1856977 - 1857864 + | nucleotide excision repair endonuclease ydjR 1858462 - 1857824 - | hypothetical protein TERM 2586 1858526 - 1858580 + rH 88 -12.1 -3.52779 | opp_overlap 1858528, overlap 1858528 GAGAAGAGAAAAGAA AACCGCCGATCCTGTCCACCGCATT ACTGC AAGGTAGTGGACAAGACCGGCGGTC TTACGTTTTTTGGCT TERM 2587 1858528 - 1858578 + rH 100 -14.7 -3.3244 | opp_overlap 1858528, overlap 1858526 GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATT ACTGC AAGGTAGTGGACAAGACCGGCGG TCTTACGTTTTTTGG TERM 2588 1858578 - 1858528 - RH 100 -19.8 -5.26907 | opp_overlap 1858528 1858526 GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATTA CTG CAAGGTAGTGGACAAGACCGGCGG TCTTACGTTTTTTGG spy 1859087 - 1858602 - | periplasmic protein UTI89_C1937 1858590 - 1859078 + | hypothetical protein TERM 2589 1859375 - 1859424 + Tr 74 -3.5 -5.03145 | opp_overlap 1859378 1859387, overlap 1859378 1859384 1859385 1859386 GTATTAATTTATAAG AAAGCAACTTAATACCCGCAGAA TGAT TTCTGCGGGTAAGTATTAGCTTA TTTTTTCGAGCATTA TERM 2590 1859378 - 1859421 + Tr 73 -5.2 -4.61482 | opp_overlap 1859378 1859387, overlap 1859375 1859384 1859385 1859386 TTAATTTATAAGAAA GCAACTTAATACCCGCAGAA TGAT TTCTGCGGGTAAGTATTAGC TTATTTTTTCGAGCA TERM 2591 1859384 - 1859416 + Tr 71 -8.6 -3.43246 | gap 1, opp_overlap 1859378 1859387, overlap 1859378 1859375 1859385 1859386 TATAAGAAAGCAACT TA-ATACCCGCAGAA TGAT TTCTGCGGGTAAGTA TTAGCTTATTTTTTC TERM 2592 1859385 - 1859414 + Tr 70 -9.3 -3.25449 | opp_overlap 1859378 1859387, overlap 1859384 1859378 1859375 1859386 ATAAGAAAGCAACTT AATACCCGCAGAA TGAT TTCTGCGGGTAAG TATTAGCTTATTTTT TERM 2593 1859386 - 1859413 + Tr 81 -12.8 -2.53642 | opp_overlap 1859378 1859387, overlap 1859385 1859384 1859378 1859375 TAAGAAAGCAACTTA ATACCCGCAGAA TGAT TTCTGCGGGTAA GTATTAGCTTATTTT TERM 2594 1859412 - 1859387 - TR 100 -16.3 -3.2827 | opp_overlap 1859386 1859385 1859384 1859378 1859375, overlap 1859378 AAGAAAGCAACTTAA TACCCGCAGAA TGAT TTCTGCGGGTA AGTATTAGCTTATTT ydjS 1860385 - 1859417 - | succinylglutamate desuccinylase TERM 2595 1860333 - 1860346 + g 81 -4.5 -5.055 | overlap 1860334 CCGTTGATTTCTCGC TCGGT GATG ACCGG TTTTTTACCCGTTAA astB 1861721 - 1860378 - | succinylarginine dihydrolase TERM 2596 1861283 - 1861268 - G 70 -4.7 -4.56597 | opp_overlap 1861255 CTTCGTCGTTAAAAA TCGCT TTTAAC AGCGA TTCGGTGACGGGGGC astD 1863196 - 1861718 - | succinylglutamic semialdehyde dehydrogenase TERM 2597 1862803 - 1862777 - G 100 -14.4 -3.56821 | opp_overlap 1862802 ATTATACGGCCCAAA CACCGCCAGCAC GCC GTGCGGGCGATG TCGCAGGCTCGCCGC astA 1864227 - 1863193 - | arginine succinyltransferase TERM 2598 1863327 - 1863290 - G 78 -8.3 -4.19735 | gap 1, opp_overlap 1863319 GCGGTTAAAATCAAA CGCTCGGTCGCTGGATCG GTA CGCACCAGC-ACCACGCG GAAATGGTGATAATT TERM 2599 1863871 - 1863853 - G 79 -10.2 -3.85698 | opp_overlap 1863845 CTTCGGGTCGAGAAA CAGCGTGC ACA GCTCGCTG CTGCCGGTGTGATCG astC 1865444 - 1864224 - | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 2600 1864747 - 1864765 + g 74 -7.4 -4.08144 | CAGGCATACAGTTCC CCGGTG CGCCCGA CACCGG TTTGTACTTCATCAA UTI89_C1944 1865707 - 1865877 + | hypothetical protein TERM 2601 1866112 - 1866126 + G 76 -9.2 -3.78775 | opp_overlap 1866102 1866100 AAAGAGACGCCGATT GCCGTG CGT CGCGGC TTTCCTGGTGACGAC xthA 1865890 - 1866696 + | exonuclease III ydjX 1866815 - 1867573 + | hypothetical protein TERM 2602 1868099 - 1868089 - gf 71 -2.4 -4.92791 | CAGAAGAGAAGAAAA CGGG TTG CCTG GTGTGTCTGGATAGC ydjY 1867416 - 1868255 + | hypothetical protein TERM 2603 1868594 - 1868607 + G 79 -2.3 -5.24129 | overlap 1868589 CCAGTTCGATGGCCG GCGCG GCAC TGTGC TTTTTTATCGCCAGA ydjZ 1868269 - 1868976 + | hypothetical protein ynjA 1868976 - 1869524 + | hypothetical protein TERM 2604 1869604 - 1869590 - gf 73 -10 -3.06696 | TTCTTTGGCAACACA TGCCAG TGA CTGGCA GGAAATAAAAAATGA TERM 2605 1870209 - 1870173 - gf 70 -5.8 -4.28045 | gap 2, opp_overlap 1870179 ACAGCATTAAAAGAA GCGCCG-GACG-ATGCGA CTT TCGCCCGCGTCACTGCGC CCTTGTGGCAATATC TERM 2606 1870372 - 1870360 - gf 95 -9.1 -5.14965 | opp_overlap 1870360, overlap 1870362 ATGCGCAGCAAAAAA TCGCC AGC GGCGA TTTGCCTGCAAGCAG TERM 2607 1870360 - 1870372 + GF 75 -9.1 -3.64703 | opp_overlap 1870360 1870362 ATGCGCAGCAAAAAA TCGCC AGC GGCGA TTTGCCTGCAAGCAG TERM 2608 1870583 - 1870569 - gf 82 -7.1 -4.59773 | CTCGATCCGCAAAAA CTGCC TGACG GGCAG CGCGAATCATTGCAA ynjB 1869534 - 1870700 + | hypothetical protein ynjC 1870649 - 1872208 + | ABC transporter permease TERM 2609 1872625 - 1872649 + GF 71 -9.1 -3.35679 | overlap 1872613 TCTGGCGGTCAGCGA GCGCGCGTTGC TCT GCTGCGCGCCC TTCTCGCTCAGCCAA ynjD 1872175 - 1872861 + | ABC transporter ATP-binding protein TERM 2610 1874208 - 1874193 - g 81 -4.6 -5.09895 | overlap 1874194 CAGCGATCCAAAAAA TCCGGT AGCA ACCGGT GAACGCGGCCCGGAC UTI89_C1953 1872913 - 1874235 + | putative thiosulfate sulfurtransferase YnjE precursor TERM 2611 1874273 - 1874247 - T 93 -15.2 -2.75803 | ATAACATTGCAATTA CTGACGCTGGAG CGA CTTCAGCGTCAG ATACCCACTCCACAC ynjF 1874870 - 1874244 - | hypothetical protein TERM 2612 1874394 - 1874376 - G 72 -6 -4.35604 | GCAACTCAGAACAAA CAGCAAAA TCG TCTCGCTG CCTTCGGTTAACCCG TERM 2613 1874528 - 1874541 + g 70 -5.9 -4.26903 | opp_overlap 1874517 1874512 1874519 1874522 CAAACAGCAGCCAGC CGCCT GCCA GGGCG TTTTGCTCCGGTGCG ynjG 1874951 - 1875358 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase ynjH 1875596 - 1875324 - | hypothetical protein TERM 2614 1875472 - 1875449 - G 93 -12.4 -3.87815 | overlap 1875465 TTTGATCCTGATAAA CGCAGCACTG AGTA CAGGGCTGCG CTGACTGCCCGCCTG TERM 2615 1875907 - 1875879 - g 70 -6.7 -4.12902 | gap 1 CAACCATGTCCAAAA GCGCG-ACCCGA ATCAAA CCGAGTTCGCGC AAGCCGTTCGTGAAG gdhA 1875832 - 1877175 + | glutamate dehydrogenase TERM 2616 1877216 - 1877182 - T 77 -11.5 -2.81072 | gap 1, overlap 1877176 1877181 GTGATTTAAGACAAT TGTGCCGGATACAGCG CAAA CGCCTTATCCGGC-CA TAAAAATCTTCAGTA TERM 2617 1877270 - 1877292 + T 100 -11.3 -5.41143 | gap 1 TGTTATCACTCCATT GCCCGCC-TC TTCT GATGGCGGGC TTTTTTTCGGCGCTC topB 1879207 - 1877252 - | DNA topoisomerase III TERM 2618 1877819 - 1877831 + g 81 -6.9 -4.71426 | opp_overlap 1877814 CGCCACCACAGGCAG CGGCG TGC CGTCG TTTTCTTCATCGCGC TERM 2619 1878064 - 1878077 + g 74 -3.1 -4.91109 | gap 1 TCGGAATGATGGCGT GGTGCG CAT CG-ACC TTTTTGTCATCCCAA TERM 2620 1878784 - 1878833 + g 70 -7.1 -4.13945 | gap 1, opp_overlap 1878765 1878817, overlap 1878785 CGATCGCCCGCTCAA CCGCCTGCGGGTTCAG-GTCGTTT ATC AAACAACGCTGTATCTGCTGGCGC TTTTCCGGTGCCAGT TERM 2621 1878785 - 1878832 + g 72 -10.6 -3.08046 | gap 1, opp_overlap 1878765 1878817, overlap 1878784 GATCGCCCGCTCAAC CGCCTGCGGGTTCAG-GTCGTTT ATC AAACAACGCTGTATCTGCTGGCG CTTTTCCGGTGCCAG selD 1880261 - 1879212 - | selenophosphate synthetase ydjA 1880941 - 1880372 - | hypothetical protein TERM 2622 1880667 - 1880689 + g 74 -7.6 -4.005 | overlap 1880670 GTTATGATGAGCGGT GCGCGGAACG GCG CATTACGCGC TTTGTCGATTGCTTT TERM 2623 1881094 - 1881113 + G 77 -2.8 -5.08824 | overlap 1881096 AATACATGCGAACCC TTTGGCGA TTTA TTGCCGGA TTTTTTAAATGGACG UTI89_C1961 1880977 - 1881141 + | hypothetical protein TERM 2624 1881977 - 1881964 - gf 79 -2.4 -5.22039 | CCGAAATCGAAAAAA CTCT GACCAA AGAG TTCGGCTGGAGTAAA sppA 1881084 - 1882940 + | protease 4 TERM 2625 1882949 - 1882980 + F 85 -8.1 -4.65895 | gap 1, opp_overlap 1882953, overlap 1882950 1882952 1882953 GCGTTAAGTCTTGTA CTAA-GTGGCCGAC AGATC GTCGGCCACATTAC TTTTTACGTCGACGA TERM 2626 1882950 - 1882979 + F 83 -11.6 -3.39216 | gap 1, opp_overlap 1882953, overlap 1882949 1882952 1882953 CGTTAAGTCTTGTAC TAA-GTGGCCGAC AGATC GTCGGCCACATTA CTTTTTACGTCGACG TERM 2627 1882952 - 1882976 + F 91 -11.4 -3.83042 | opp_overlap 1882953, overlap 1882950 1882949 1882953 TTAAGTCTTGTACTA AGTGGCCGAC AGATC GTCGGCCACA TTACTTTTTACGTCG TERM 2628 1882953 - 1882975 + F 89 -14.9 -2.89102 | opp_overlap 1882953, overlap 1882952 1882950 1882949 TAAGTCTTGTACTAA GTGGCCGAC AGATC GTCGGCCAC ATTACTTTTTACGTC TERM 2629 1882975 - 1882953 - f 100 -15.6 -3.14881 | opp_overlap 1882953 1882952 1882950 1882949 TAAGTCTTGTACTAA GTGGCCGACA GAT CGTCGGCCAC ATTACTTTTTACGTC TERM 2630 1883886 - 1883860 - g 73 -3.7 -4.77173 | overlap 1883862 GCGCCACAAAACAAA GCCTTCCTGCA GGAAT TACAAGAAGCC AGCGATCGCGGTATT ansA 1883107 - 1884123 + | cytoplasmic asparaginase I ydjB 1884134 - 1884775 + | nicotinamidase/pyrazinamidase TERM 2631 1884823 - 1884776 - T 74 -10.2 -3.23984 | gap 1, opp_overlap 1884814 GAAACGCAGGAGTAA TTTTACGCTGGCCTACAATTC TGTACTG GCATTGTAGGCCAG-ATAAAA CACATCAGTGATACA ydjE 1886295 - 1884868 - | metabolite transport protein YdjE TERM 2632 1885737 - 1885715 - G 100 -4.8 -5.63103 | CGCCAACTAAAAAAA GCGATAACCA CCA CGCCTATCGC CGCAGACAGCATGGG TERM 2633 1885929 - 1885913 - G 74 -6.5 -4.44245 | overlap 1885904 1885901 ATATCAGGGACAAAA GCGGC CCCTGTT GCCGC AATACCGACGATGAG TERM 2634 1886261 - 1886282 + g 77 -10.2 -3.60538 | opp_overlap 1886261 1886260, overlap 1886259 AAAAAAGGTAGCAAT TGCGGCAA ATTCAC TTGCCGCA TCTTTATCATCATTT ydjF 1887102 - 1886344 - | putative DEOR-type transcriptional regulator ydjG 1888219 - 1887239 - | oxidoreductase YdjG TERM 2635 1887811 - 1887794 - G 74 -3.3 -5.0133 | TATCGGCGTAAAAAA TGGCGGC ACCG ACTGCCA GTGCGTCATGTAGAT TERM 2636 1887983 - 1887997 + g 86 -4.2 -5.41143 | GGTTTCTACTACAAC CTGTTC ACG GGGCAG TTTTTTTAACGCCTG ydjH 1889197 - 1888229 - | sugar kinase YdjH ydjI 1890017 - 1889181 - | putative membrane protein YdjI ydjJ 1891081 - 1890038 - | zinc-type alcohol dehydrogenase-like protein YdjJ ydjK 1892477 - 1891098 - | metabolite transport protein YdjK TERM 2637 1891784 - 1891796 + g 78 -9.1 -3.9093 | AAGGTTTACCCGTCT GGCGT ATG ACGCC TTCTTCTATACTCCG TERM 2638 1892449 - 1892459 + g 71 -2.4 -4.90002 | CGATCCAGCCGTGCA CCAC AAT GCGG TTTTGTTATCTGTTC ydjL 1893580 - 1892504 - | putative oxidoreductase TERM 2639 1893461 - 1893478 + g 77 -8.3 -4.08485 | GTGCTTCATGTCTGC GCCGCAG ATTG CCGCGGC TTTAATTTCAATCAC TERM 2640 1893697 - 1893652 - R 76 -10.7 -3.05844 | opp_overlap 1893639 1893657 1893666, overlap 1893657 1893658 1893666 TTTTTGAGGTCAACA TCAAATCTGTAAAACACAGAT AATG ATCTGCGTTTTACAACTTGGA TCACAATTACGCAGA TERM 2641 1893692 - 1893657 - R 79 -9.2 -3.93038 | opp_overlap 1893657 1893666, overlap 1893652 1893658 1893666 GAGGTCAACATCAAA TCTGTAAAACACAGAT AATG ATCTGCGTTTTACAAC TTGGATCACAATTAC TERM 2642 1893691 - 1893658 - R 82 -12.7 -2.95341 | opp_overlap 1893657 1893666, overlap 1893657 1893652 1893666 AGGTCAACATCAAAT CTGTAAAACACAGAT AATG ATCTGCGTTTTACAA CTTGGATCACAATTA TERM 2643 1893683 - 1893666 - R 70 -6.3 -4.17491 | opp_overlap 1893657 1893666, overlap 1893658 1893657 1893652 ATCAAATCTGTAAAA CACAGAT AATG ATCTGCG TTTTACAACTTGGAT yeaC 1894267 - 1893950 - | hypothetical protein msrB 1894707 - 1894264 - | methionine sulfoxide reductase B TERM 2644 1894947 - 1894963 + H 73 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC gapA 1895010 - 1896014 + | glyceraldehyde-3-phosphate dehydrogenase A TERM 2645 1896041 - 1896058 + F 100 -11.3 -5.82316 | opp_overlap 1896041 TCTGTGATCTAAAAA GAGCGAC TTCG GTCGCTC TTTTTTTTACCTGAT TERM 2646 1896058 - 1896041 - f 100 -11.3 -4.65895 | opp_overlap 1896041 TCTGTGATCTAAAAA GAGCGAC TTCG GTCGCTC TTTTTTTTACCTGAT TERM 2647 1896314 - 1896304 - g 81 -6.8 -4.59109 | CACACCGTTCAAAAA TGGC GTC GCCA TTCGCGGTGGCATAC yeaD 1896077 - 1896982 + | hypothetical protein yeaE 1897932 - 1897033 - | hypothetical protein TERM 2648 1897941 - 1897925 - G 85 -10.1 -4.2803 | opp_overlap 1897925 CACCGTAATGCAAAA CAGGGCA TGA CGCCCTG TTTTTATGCACAAAA TERM 2649 1897925 - 1897941 + g 95 -9.4 -4.82901 | opp_overlap 1897925 CACCGTAATGCAAAA CAGGGC ATGAC GCCCTG TTTTTATGCACAAAA yeaF 1898723 - 1897977 - | hypothetical protein TERM 2650 1900122 - 1900109 - g 72 -4.5 -4.72127 | TAATAACAAAAACAA CGAAG CCTT CCTCG ACCGTGTTTACATCG TERM 2651 1900983 - 1900972 - g 70 -5.8 -4.19238 | CGTTTAACGCCAAAA CGTC AACC GACG AGCAGAAGAAACACG yeaG 1899159 - 1901093 + | hypothetical protein yeaH 1901206 - 1902489 + | hypothetical protein TERM 2652 1902495 - 1902521 + F 91 -9.4 -4.67755 | TAAAGACTAAAACTG TCAGCCGGGTCA TTA TCGCCTGGCTGA TTTTTAGCTCACTGT TERM 2653 1904075 - 1904055 - g 74 -7.5 -4.13872 | ACGGAAGCAGATAAA GCCTTACGC GAA GCGAAAAGC GAAGGGGGCAACAAA yeaI 1902636 - 1904111 + | hypothetical protein TERM 2654 1904129 - 1904147 + G 76 -8.1 -4.20106 | GCAAAAATATTCAGA GCCATGC TTTTT GCGTGGC TTTTGCATACAATTT yeaJ 1904112 - 1905782 + | hypothetical protein TERM 2655 1905936 - 1905961 + G 78 -10.5 -3.53012 | gap 1, opp_overlap 1905931 GTAGGTAAATGTGAA GCGGTGTCA-GA AAT TCGTGGCACCGC TTTAGGCCAGGGGGC UTI89_C1983 1905825 - 1906328 + | hypothetical protein UTI89_C1984 1906481 - 1906329 - | hypothetical protein yeaL 1906603 - 1907049 + | hypothetical protein yeaM 1907827 - 1907006 - | transcriptional regulator YeaM TERM 2656 1907068 - 1907089 + g 93 -11.5 -4.1711 | opp_overlap 1907066, overlap 1907085 1907086 ATCCCGCAATATATC GGCCTGGCG TTTG CCCCAGGCC TTTCTTAAACATAGT UTI89_C1987 1907924 - 1909105 + | putative amino acid/amine transport protein TERM 2657 1909480 - 1909456 - g 86 -6.5 -5.1675 | gap 1 CTACTCAGCAAAAAA CACCA-CGCA GAACCA TGCGCTGGTG CTGGCAGACTGGCTA yeaO 1909160 - 1909507 + | hypothetical protein yoaF 1909783 - 1909529 - | hypothetical protein yeaP 1909837 - 1910991 + | hypothetical protein TERM 2658 1911246 - 1911216 - T 79 -4.8 -5.1287 | gap 1, opp_overlap 1911223, overlap 1911218 1911219 GTCACATCTAAAAAA TAGCAAAGGCTGC CTGTGT GCAGCCTTTG-TG CAATTTACGCGTTAA TERM 2659 1911245 - 1911218 - T 84 -9.9 -4.19215 | opp_overlap 1911223, overlap 1911216 1911219 CACATCTAAAAAATA GCAAAGGCTGC CTGTGT GCAGCCTTTGT GCAATTTACGCGTTA TERM 2660 1911244 - 1911219 - T 86 -13.4 -3.10444 | opp_overlap 1911223, overlap 1911218 1911216 ACATCTAAAAAATAG CAAAGGCTGC CTGTGT GCAGCCTTTG TGCAATTTACGCGTT TERM 2661 1911223 - 1911240 + T 76 -8.4 -3.95219 | opp_overlap 1911219 1911218 1911216 CTAAAAAATAGCAAA GGCTGC CTGTGT GCAGCC TTTGTGCAATTTACG yeaQ 1911506 - 1911258 - | hypothetical protein UTI89_C1993 1911640 - 1911518 - | hypothetical protein yoaG 1911836 - 1911654 - | hypothetical protein yeaR 1912199 - 1911840 - | hypothetical protein yeaS 1913010 - 1912372 - | leucine export protein LeuE TERM 2662 1912970 - 1912959 - G 79 -2.2 -5.29716 | CCAACACAATAAAAA TGGC CCCA ACCA GATAGGTCCAGTAAT TERM 2663 1913110 - 1913095 - H 74 -5.4 -4.64846 | TTAGAAAGGAGAAAA TCAGGT TTTA ACCCGA TATCAACCCGATAAT TERM 2664 1913359 - 1913349 - g 70 -4.6 -4.56597 | CGTGGTCCGGAAAAA CACC GAA GGCG AATATTCCTCGCTAG UTI89_C1997 1913293 - 1913463 + | hypothetical protein TERM 2665 1913507 - 1913550 + T 100 -20.4 -4.36262 | overlap 1913509 CTGTTGGATTTGTAG TTTGCCGAAGCCGGACTGAG CGCG CCCAGTCCGGCTTCGGAAGA TTTTACTGTGGATAT TERM 2666 1913509 - 1913548 + T 100 -20.8 -2.52138 | overlap 1913507 GTTGGATTTGTAGTT TGCCGAAGCCGGACTGAG CGCG CCCAGTCCGGCTTCGGAA GATTTTACTGTGGAT rnd 1914680 - 1913553 - | ribonuclease D TERM 2667 1914729 - 1914713 - R 100 -10.8 -5.75342 | opp_overlap 1914726, overlap 1914724 GGGCGTCAAAAAAAA CGCCGG ATTAA CCGGCG TCTGACGACTGACTT fadD 1916501 - 1914750 - | long-chain-fatty-acid--CoA ligase TERM 2668 1914903 - 1914892 - G 70 -4.4 -4.57569 | opp_overlap 1914892 TGACGGCGGCAAAAA GTCA CCAG TGAC TCTTCGGTAAGCGAT TERM 2669 1915480 - 1915468 - G 72 -7.7 -3.91144 | opp_overlap 1915467 1915464, overlap 1915454 1915453 TGCAGACTGGAGAAA TCCAG CTG CTGGA ACTCTTTATTGTTCA TERM 2670 1916618 - 1916594 - R 87 -14.4 -2.66106 | opp_overlap 1916594 1916613, overlap 1916598 TACCGTAAGAATGCA GAAACAGCGG ACCGG CCGCTGTTTC TTTTTCTTTAAAAAC TERM 2671 1916594 - 1916618 + r 100 -14.4 -5.27335 | opp_overlap 1916594 1916598, overlap 1916613 TACCGTAAGAATGCA GAAACAGCGG ACCGG CCGCTGTTTC TTTTTCTTTAAAAAC TERM 2672 1916614 - 1916598 - R 81 -9.4 -4.02253 | opp_overlap 1916594 1916613, overlap 1916594 GTAAGAATGCAGAAA CAGCGG ACCGG CCGCTG TTTCTTTTTCTTTAA yeaY 1917221 - 1916640 - | putative outer membrane protein yeaZ 1917956 - 1917261 - | O-sialoglycoprotein endopeptidase UTI89_C2002 1919924 - 1918014 - | putative enzyme TERM 2673 1918536 - 1918525 - G 72 -4.4 -4.64846 | opp_overlap 1918525 GTACAAAGCATAAAA CAAC GACC GTTG TTAGCTTCGATGATC UTI89_C2003 1920319 - 1919957 - | hypothetical protein UTI89_C2004 1920008 - 1920400 + | hypothetical protein TERM 2674 1920472 - 1920446 - fH 72 -9.5 -3.25668 | overlap 1920444 AATTTATCGATAATA CTGGTCGGTTT TACAT AAATCGACCAG AGATTAAGATATTAC yoaC 1920762 - 1921121 + | hypothetical protein TERM 2675 1921151 - 1921181 + TF 100 -11.3 -4.84359 | AGCATAAATGGGTCA GGACGCTTTTAAT CACAT ATGAAAAGCGTCC TTTTTCTCACAATCA yoaH 1921420 - 1921241 - | hypothetical protein UTI89_C2006 1921238 - 1921402 + | hypothetical protein TERM 2676 1922208 - 1922221 + G 83 -5.2 -5.055 | AATCAGGCCAACCGC GCGC CGTTTA GCGC TTTTTTACGCCTTGA pabB 1921494 - 1922855 + | para-aminobenzoate synthase component I yeaB 1922859 - 1923437 + | hypothetical protein TERM 2677 1924461 - 1924445 - g 73 -3.5 -4.79174 | opp_overlap 1924447, overlap 1924447 AGTTAACGAAGAAAA CGCCGCC GGT GGCCGTG TGGTAACTGCGCCAA sdaA 1923621 - 1924985 + | L-serine dehydratase 1 TERM 2678 1924995 - 1925021 + F 100 -17.4 -4.19371 | GACTAATACTTCTTA TTCGCCCATCTG CAA CGGATGGGCGAA TTTATTCCCGCTTTC TERM 2679 1926677 - 1926643 - g 100 -14.9 -3.54424 | opp_overlap 1926673 TGTGATTTTCCCAAA TGGCTGGCGGGCAGC CAACC GCCGCCCGCCCGGCA TAATGGACATATCAC UTI89_C2011 1925086 - 1926714 + | hypothetical protein yoaE 1928274 - 1926718 - | putative transmembrane protein TERM 2680 1927104 - 1927093 - G 72 -5.8 -4.35483 | GGTCACGATAACAAA GCTC CCGC GAGC ACGACGCAGCACGCC UTI89_C2013 1928471 - 1928262 - | hypothetical protein TERM 2681 1928492 - 1928469 - G 72 -8.2 -3.72678 | opp_overlap 1928473 TAAACAGGAGTTAAA CATATCAGAG ACGC CTCTGATTTG GCAAAGATTTACCTT TERM 2682 1929170 - 1929145 - g 88 -8.9 -4.58685 | AAACCGGTTGAAAAA GCCGCGCCAGC ACCC GCTACCGCAGC ACCAAAAGCGGCTCC manX 1928737 - 1929708 + | PTS system, mannose-specific IIAB component UTI89_C2016 1930628 - 1929867 - | hypothetical protein manY 1929771 - 1930571 + | PTS enzyme IIC, mannose-specific TERM 2683 1930634 - 1930620 - Gg 82 -2.8 -5.28778 | opp_overlap 1930621, overlap 1930621 ACCACCGAGAAAAAA CTCACT CAA AGTGAT ATTCGTGGCGTCTTC manZ 1930575 - 1931435 + | mannose-specific PTS system protein IID TERM 2684 1931470 - 1931451 - fH 74 -10.6 -2.62396 | opp_overlap 1931452 GACTGTTGTACACTA CCGGGGCC TTTT GGCCCCGT TTTTTTATCTGGAGG TERM 2685 1931452 - 1931469 + FH 100 -14.1 -5.71712 | opp_overlap 1931451 ACTGTTGTACACTAC CGGGGCC TTTT GGCCCCG TTTTTTTATCTGGAG yobD 1931490 - 1931948 + | hypothetical protein TERM 2686 1931959 - 1932010 + F 72 -9.8 -3.1577 | gap 1, opp_overlap 1931957 1931961, overlap 1931959 1931957 AATAAGTTATGAATT TAGCCAAAGCTATGTTTAGTGTATT TTT AATA-ATCAGACATAGCTTAGGCTA TATTACCTCTTCCCT UTI89_C2019 1932323 - 1932943 + | hypothetical protein rrmA 1933749 - 1932940 - | 23S rRNA methyltransferase A TERM 2687 1933872 - 1933842 - R 73 -9.1 -3.51271 | opp_overlap 1933848, overlap 1933848 GAAGATAAAACAAAG TAAAAAGCCTCGC ATTCG ACGAGGCTTTATA GCGAGATTGAAGCGT TERM 2688 1933866 - 1933848 - R 87 -8.1 -5.1517 | opp_overlap 1933848, overlap 1933842 AAAACAAAGTAAAAA GCCTCGC ATTCG ACGAGGC TTTATAGCGAGATTG TERM 2689 1933848 - 1933866 + r 70 -7.4 -3.86822 | opp_overlap 1933842 1933848 AAAACAAAGTAAAAA GCCTCG CATTCGA CGAGGC TTTATAGCGAGATTG TERM 2690 1933938 - 1933922 - R 70 -9.5 -2.94747 | opp_overlap 1933913 GGATTCGATCAGATA GCTGTTA CGT TAACAGC TGCCGGACCTTTCTG cspC 1934124 - 1933915 - | cold shock-like protein CspC yobF 1934280 - 1934137 - | hypothetical protein UTI89_C2023 1934242 - 1934505 + | hypothetical protein TERM 2691 1934937 - 1934906 - TR 72 -9.6 -3.25729 | gap 1, opp_overlap 1934913 TATAATCAGCATGAA TTGAGTAAC-CCTTC AAC GACGGGGTTACTCAA GATTGAGGAAGGATT yebO 1935238 - 1934951 - | hypothetical protein mgrB 1935456 - 1935313 - | hypothetical protein UTI89_C2027 1935615 - 1935854 + | hypothetical protein TERM 2692 1935988 - 1935958 - T 93 -11.3 -4.44046 | opp_overlap 1935958 1935961 CTCATGCTAAATAAA GAACCTGTCTG TTTGATATT CAGACAGGTTC TTACTCTCATCAGAA TERM 2693 1935958 - 1935988 + T 83 -11.3 -3.29471 | opp_overlap 1935958, overlap 1935961 CTCATGCTAAATAAA GAACCTGTCTG TTTGATATT CAGACAGGTTC TTACTCTCATCAGAA kdgR 1936789 - 1935998 - | transcriptional regulator KdgR yebQ 1936855 - 1938339 + | transport protein YebQ TERM 2694 1938339 - 1938370 + T 79 -11.7 -2.74026 | opp_overlap 1938345, overlap 1938345 ACGATCCAGGGCATA AAAAAAGCGCGTC GATCAG GACGCGCTTTTTA GTATTTACTTCATAT TERM 2695 1938364 - 1938345 - T 100 -10.7 -5.626 | opp_overlap 1938339 1938345 CAGGGCATAAAAAAA GCGCGTC GATCAG GACGCGC TTTTTAGTATTTACT TERM 2696 1938345 - 1938364 + T 100 -10.7 -4.946 | opp_overlap 1938345, overlap 1938339 CAGGGCATAAAAAAA GCGCGTC GATCAG GACGCGC TTTTTAGTATTTACT htpX 1939266 - 1938385 - | heat shock protein HtpX TERM 2697 1939306 - 1939296 - R 79 -6.8 -4.65916 | opp_overlap 1939303, overlap 1939298 1939303 1939304 CTCAGTTTAACAAAA CGCA ATA TGCG ATACCCACATCGTAT TERM 2698 1939428 - 1939451 + r 100 -14 -3.42147 | opp_overlap 1939428 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC TERM 2699 1939451 - 1939428 - R 100 -14 -5.00616 | opp_overlap 1939428 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC prc 1941506 - 1939458 - | carboxy-terminal protease TERM 2700 1939930 - 1939940 + g 72 -8.2 -3.77219 | GGCATGATGATGTCT GGCG TTA CGCC TTTACGTTGCGTACT TERM 2701 1941081 - 1941099 + g 74 -8.1 -4.13767 | GTTATAAGTGTCGTT GCCGGTG AAATC CATCGGC TTTTCCAGTACCGAC TERM 2702 1941154 - 1941139 - G 77 -8.2 -4.14392 | opp_overlap 1941139 1941138, overlap 1941140 TGGTAACGTTCAAAA CGGCGC TTTT GCGCCA GATTGTAGAGATCGT proQ 1942224 - 1941526 - | putative solute/DNA competence effector TERM 2703 1941816 - 1941828 + g 70 -6.9 -4.06419 | overlap 1941781 GTGGCTTGCGTTCGC GGCGC GGT GCGTC TTCTTTCTCACCAGC UTI89_C2033 1942872 - 1942321 - | hypothetical protein TERM 2704 1942890 - 1942866 - G 72 -6.6 -4.26903 | opp_overlap 1942869 GCCAGCCTATTAAAA TAAGCATTAA ATGCG TTAATGCTCA AGATCATTCCCATCA TERM 2705 1943187 - 1943209 + GH 72 -9.8 -3.14125 | overlap 1943184 CATGCTGTTGCTTAT GCCGTTTGCC TGG GGCGAACCGC TGTTGCATATCTGGC TERM 2706 1944033 - 1944051 + GH 78 -8.8 -4.08111 | overlap 1944035 GACCTGGATTGGTCG CTGGTCGA TGC TCGACCTG TTTGTCATATCTTTA TERM 2707 1944035 - 1944049 + GH 78 -10 -3.61777 | overlap 1944033 CCTGGATTGGTCGCT GGTCGA TGC TCGACC TGTTTGTCATATCTT yebS 1942948 - 1944231 + | hypothetical protein TERM 2708 1945064 - 1945052 - gf 79 -4.8 -4.89477 | overlap 1945054 GGCGTAATAATAAAA CTGG AACTG CCAG GCGGTGCCGGATTAA yebT 1944158 - 1946833 + | hypothetical protein TERM 2709 1946841 - 1946866 + F 100 -14.7 -3.9712 | opp_overlap 1946835, overlap 1946842 CCAAATAATGCCCAC TGCTCCGGCGT GCCT GCGCCGGAGCG TTTATGCTAAACTGC TERM 2710 1946842 - 1946865 + F 100 -16 -2.97951 | opp_overlap 1946835, overlap 1946841 CAAATAATGCCCACT GCTCCGGCGT GCCT GCGCCGGAGC GTTTATGCTAAACTG TERM 2711 1947422 - 1947433 + G 70 -5.8 -4.25283 | TGGCATCAGTAATGT TGCG CTCA CGCA TTTTGATGGCCGCGT TERM 2712 1947558 - 1947548 - g 86 -6.8 -5.02074 | CGATGCGCTAAAAAA CTGG TCA CCAG AAAGCAATCAGGAAA yebU 1946907 - 1948352 + | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 2713 1948484 - 1948495 + G 70 -7.2 -4.13767 | GATGAAAACCAGTGT GCGC ATAG GCGC TTTTGAAATCGACGA TERM 2714 1948535 - 1948523 - g 71 -10.5 -2.90723 | CGACGGCGAATTACA CGGCG AAT CGCCG GGTGATCGAACGTTA yebV 1948455 - 1948706 + | hypothetical protein TERM 2715 1948734 - 1948718 - f 71 -5 -4.44608 | opp_overlap 1948718, overlap 1948715 CTGATCCAAAAAGAA CCCGTC GGCAT GGCGGG TTATTTGTCCGGGTT TERM 2716 1948718 - 1948734 + F 74 -7.9 -4.07535 | opp_overlap 1948718 1948715 CTGATCCAAAAAGAA CCCGTCG GCA TGGCGGG TTATTTGTCCGGGTT TERM 2717 1948924 - 1948935 + G 72 -7.2 -4.21933 | opp_overlap 1948923 GAGCGATCAACGGAT CCGC CATG GCGG TTGTTTTCCGATTGA yebW 1948727 - 1949002 + | hypothetical protein pphA 1949662 - 1949003 - | serine/threonine protein phosphatase 1 TERM 2718 1949828 - 1949799 - R 79 -5.1 -5.10064 | gap 1, overlap 1949801 TTTAACAGATAAAAA GAGACCGAACAC GATTCCT GTATTCGGTC-C AGGGAAATGGCTCTT TERM 2719 1949827 - 1949801 - R 80 -8.8 -4.16832 | overlap 1949799 TAACAGATAAAAAGA GACCGAACAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT UTI89_C2040 1950036 - 1949884 - | hypothetical protein TERM 2720 1950018 - 1949989 - G 75 -5.1 -4.70879 | gap 2, opp_overlap 1949989 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTATTGGAAAT TERM 2721 1949989 - 1950018 + g 91 -5.1 -5.45652 | gap 2, opp_overlap 1949989 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTATTGGAAAT yebY 1950395 - 1950054 - | hypothetical protein yebZ 1951280 - 1950408 - | hypothetical protein TERM 2722 1951180 - 1951156 - G 74 -6.4 -4.51196 | opp_overlap 1951159 TGTAAACGCAGAAAA CGCTTCGTCA GCAAG CGACGAATCG TTAAGGGGGCCAGCC TERM 2723 1951261 - 1951251 - G 70 -6.8 -4.02132 | GGTGAAATGGATAAA TCGC AGC GCGA TCCAGGTAAACGCCA yobA 1951658 - 1951284 - | hypothetical protein holE 1951797 - 1952027 + | DNA polymerase III subunit theta UTI89_C2045 1952129 - 1952785 + | hypothetical protein TERM 2724 1952847 - 1952833 - g 70 -7.1 -4.1399 | overlap 1952829 TTATCGATACAGAAA CCTGC GGTTT GCAGG GAGGGATCGTAGAGA exoX 1952808 - 1953470 + | exodeoxyribonuclease X ptrB 1955527 - 1953467 - | protease 2 TERM 2725 1954761 - 1954745 - G 71 -2.2 -4.97405 | gap 1, opp_overlap 1954746, overlap 1954746 AGGCAGAAAAACAAA CGGCTCG GCAT CG-GCCA TTTCCGCGTCCAGCA TERM 2726 1955163 - 1955153 - G 75 -5.4 -4.67982 | opp_overlap 1955161 GCCCATCGAATAAAA CTCA CTA TGAG CCGCGCGCTTGTTGG yebE 1956395 - 1955736 - | hypothetical protein TERM 2727 1956142 - 1956154 + Gg 74 -3.3 -4.88684 | overlap 1956142 TGCGGTTCATCCTGA TGCGC CGC GCGAA TTTTATCTTTGTATT UTI89_C2048 1955613 - 1956215 + | hypothetical protein yebF 1957090 - 1956722 - | hypothetical protein TERM 2728 1956905 - 1956917 + g 75 -4.7 -4.73613 | overlap 1956906 TTGATCATCAGCCCA GCGCG CCA CGCGA TTTTGTTGGTAATCA yebG 1957435 - 1957145 - | DNA damage-inducible protein YebG purT 1957569 - 1958747 + | phosphoribosylglycinamide formyltransferase 2 TERM 2729 1958801 - 1958762 - T 72 -3.1 -5.01732 | gap 3, opp_overlap 1958773, overlap 1958773 AACCCGGCCAAAAAA CGCTACAAAAATGCCCGATC CTC GATCGGGCATTTT-G-A-CT TTTACAGCTTAGCGC TERM 2730 1958773 - 1958793 + T 100 -15.5 -4.4267 | opp_overlap 1958762 1958773 AAAACGCTACAAAAA TGCCCGATC CTC GATCGGGCA TTTTGACTTTTACAG TERM 2731 1958793 - 1958773 - T 100 -15.5 -4.90296 | opp_overlap 1958773, overlap 1958762 AAAACGCTACAAAAA TGCCCGATC CTC GATCGGGCA TTTTGACTTTTACAG eda 1959444 - 1958803 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2732 1959399 - 1959387 - G 71 -9.1 -3.44051 | opp_overlap 1959395 1959396, overlap 1959396 TTTTTACCACGATAA CCGGT ACA ACCGG GCCGGTGGTCAGGAT TERM 2733 1959505 - 1959522 + r 82 -7.7 -4.56597 | GATACAGGTTGCGCC CTGTTCG GCAC CGGACAG TTTTTCACGCAAGGC edd 1961358 - 1959481 - | phosphogluconate dehydratase TERM 2734 1959972 - 1959992 + g 76 -7.5 -4.2558 | overlap 1959973 CTTCAATCACCTGGT TCTCTACCG GCA CGGCAGAGG TTTTCATAACCGCTC TERM 2735 1961447 - 1961422 - R 100 -11.2 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGTG-GG TGAAT CCGCACGAGGC CTGAAAGTGTAAAAA zwf 1963002 - 1961527 - | glucose-6-phosphate 1-dehydrogenase TERM 2736 1962962 - 1962928 - G 89 -13.6 -3.22388 | overlap 1962932 CAGGGAAGGCAGCAA TTTACGACGCGCAAGG TCG CCTTTCGCGCCGAAAA TGACCAGGTCACAGG TERM 2737 1962958 - 1962932 - G 90 -14.4 -2.57721 | overlap 1962928 GAAGGCAGCAATTTA CGACGCGCAAGG TCG CCTTTCGCGCCG AAAATGACCAGGTCA UTI89_C2056 1963317 - 1963168 - | hypothetical protein TERM 2738 1963374 - 1963359 - g 81 -4.7 -5.02476 | overlap 1963348 ATATGCTGGAAAAAA TCCAG TCTCAG CTGGA ACATTTGAGCAAATC yebK 1963340 - 1964209 + | DNA-binding transcriptional regulator HexR TERM 2739 1964196 - 1964222 + F 72 -10.2 -2.87146 | opp_overlap 1964182 1964196 AGTTACTTAATTTAA GTGACGATCGCT AAA AACGATTGTCAC TGTCCTAATCTTATA TERM 2740 1964222 - 1964196 - f 74 -10.2 -3.19371 | opp_overlap 1964196, overlap 1964182 AGTTACTTAATTTAA GTGACGATCGCT AAA AACGATTGTCAC TGTCCTAATCTTATA TERM 2741 1964675 - 1964664 - g 95 -5.8 -5.38054 | GGCGACAAAGAAAAA GTCG GTAT CGAC TACAAAGGCCTGCCT pykA 1964196 - 1965779 + | pyruvate kinase TERM 2742 1965825 - 1965780 - T 71 -9 -3.27994 | gap 2, opp_overlap 1965783, overlap 1965783 TTAACGGTAGAGTAA GTAC-GTTG-CCGGATGCGGCG AAAA CGCCTCATCCGGCCTACAGTTC AATGATAATTCAACA TERM 2743 1965821 - 1965783 - T 79 -11.7 -2.81725 | gap 1, opp_overlap 1965783, overlap 1965780 ACGGTAGAGTAAGTA CGTTG-CCGGATGCGGCG AAAA CGCCTCATCCGGCCTACA GTTCAATGATAATTC TERM 2744 1965886 - 1965906 + T 100 -6.8 -5.68438 | overlap 1965887 TTATCATCAGTCGAA GGCCTCTC CTCGC GAGAGGCA TTTTTTATTTGATGG TERM 2745 1965887 - 1965905 + T 82 -10.3 -3.99436 | overlap 1965886 TATCATCAGTCGAAG GCCTCTC CTCGC GAGAGGC ATTTTTTATTTGATG msbB 1966882 - 1965911 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2746 1966393 - 1966381 - G 79 -4.7 -4.9755 | opp_overlap 1966381 AGACATAATCAAAAA CCGGG TTG CCCTG ATTATGGAACATCGC TERM 2747 1966984 - 1966962 - R 100 -10.6 -5.68438 | GCACCAAATAAAAAA GCCGGTAC TGACTGC GTACCGGC TGCGAATGGATGTTA yebA 1968323 - 1967001 - | hypothetical protein TERM 2748 1967702 - 1967718 + g 81 -10.1 -3.87815 | opp_overlap 1967713, overlap 1967689 CTGCGCTCACTTCGG CGCTGGT TAA ACCGGCG TTTCTGGCGCTGGCA znuA 1969397 - 1968339 - | high-affinity zinc transporter periplasmic component TERM 2749 1968615 - 1968626 + gH 72 -4.4 -4.59773 | ATGACCAAGCGGTGT CAGT CCGA ACTG TTTTTCGAAGTAGCC TERM 2750 1968867 - 1968880 + gH 77 -3.1 -5.03715 | overlap 1968856 1968865 GAAATCGCCGTGATG GTGAT CTTC GTCAC TTTTTTCCGCGTGAT TERM 2751 1968980 - 1968998 + gH 75 -5.3 -4.65895 | TTACCTGTTTCGCTT CTGGTAA TTTAC TTACCGG TTTTTGCATGAACGC znuC 1969350 - 1970105 + | high-affinity zinc transporter ATPase znuB 1970102 - 1970887 + | high-affinity zinc transporter membrane component TERM 2752 1970906 - 1970937 + T 85 -10.8 -3.76568 | overlap 1970907 TTCGCTGAACATATT TGTCGGATGCGGCG CGAG CGCCTTATCCGACC TTGTATTATCCCTCC TERM 2753 1970907 - 1970936 + T 89 -14.3 -2.85459 | overlap 1970906 TCGCTGAACATATTT GTCGGATGCGGCG CGAG CGCCTTATCCGAC CTTGTATTATCCCTC TERM 2754 1971087 - 1971049 - T 76 -10.2 -3.27771 | overlap 1971041 1971047 CTGATAAGACGAACA GCGTCGCATCAGGCAC ACTGCCA GTGTCGGATGCGGCGC GAGCGACCAATCCGA ruvB 1972114 - 1971104 - | Holliday junction DNA helicase B TERM 2755 1971769 - 1971740 - G 86 -12.3 -3.48593 | gap 1, opp_overlap 1971738 CATTGCCGGATACAA CACC-TCTTCCACC ACT GGTGAAAGACGGTG GATCTCATCAATAAA ruvA 1972734 - 1972123 - | Holliday junction DNA helicase motor protein TERM 2756 1972803 - 1972784 - H 100 -6.4 -5.67063 | overlap 1972785 TGTATGATAAAAAAA TGCTGGAT AGAT ATCCAGCG AAGGATGAAGAAAAC TERM 2757 1972802 - 1972785 - H 81 -9.9 -3.99153 | overlap 1972784 GTATGATAAAAAAAT GCTGGAT AGAT ATCCAGC GAAGGATGAAGAAAA TERM 2758 1972967 - 1972957 - H 79 -2.6 -5.40072 | opp_overlap 1972957 GCCCCCTGAAAAAAA TAAA TTT TTTA TGCTATTACGTATAT TERM 2759 1973292 - 1973280 - g 85 -3.4 -5.35721 | ACAGAACAACAAAAA CAAC GAATT GTTG AACAGGTTCCCTCCC TERM 2760 1973606 - 1973581 - g 77 -10.4 -3.59979 | opp_overlap 1973597 CGGTGGGAGTTGAAA CGCCTCAGCC TGAACT GACCGAGGCG GTATAACTTAACGCA yebB 1973010 - 1973612 + | hypothetical protein ruvC 1974135 - 1973614 - | Holliday junction resolvase TERM 2761 1973748 - 1973777 + g 86 -7.1 -5.02074 | opp_overlap 1973752 TAGCGGGCAGTTTCA GCAAGGTGCGG ACCATATG CTGCACCTGGC TTTTTTCGGCACTAC yebC 1974910 - 1974170 - | hypothetical protein ntpA 1975382 - 1974939 - | dATP pyrophosphohydrolase aspS 1977156 - 1975384 - | aspartyl-tRNA synthetase TERM 2762 1977502 - 1977488 - g 72 -7.1 -4.20354 | opp_overlap 1977488 1977488 1977489 AACTTAATGCTAAAA CCACC GCGCT GGTGG TGATTGATTTACAAG yecD 1977466 - 1978032 + | hypothetical protein TERM 2763 1978120 - 1978140 + G 74 -8.2 -3.89346 | CCCGCAACTTTAACT GCGTGGAG GGTAA CACCACGC TTTATGCCCTGCCGA yecE 1978029 - 1978847 + | hypothetical protein TERM 2764 1978983 - 1979006 + G 88 -11 -4.08767 | gap 1, opp_overlap 1978980 CCTGCGAATGCAGTA CCG-CGTTGCC TAT GGCGACGGCGG TTTTAGCGAACTGCA yecN 1978870 - 1979295 + | hypothetical protein yecO 1979336 - 1980079 + | hypothetical protein yecP 1980076 - 1981047 + | hypothetical protein TERM 2765 1981184 - 1981201 + T 100 -14.1 -4.20712 | opp_overlap 1981180 GTTTGCATAACCTCA GCGCCCG TTTC CGGGCGC TTTTCACGTCTTATG bisZ 1983659 - 1981212 - | trimethylamine-N-oxide reductase 2 precursor TERM 2766 1982905 - 1982918 + g 74 -2.3 -5.06451 | opp_overlap 1982897 1982906, overlap 1982897 1982906 GGATCAATGGCAATC ACTGG TTTG CCAGA TTTTTTCAGCTGATG yecK 1984766 - 1983666 - | cytochrome c-type protein TorY TERM 2767 1985106 - 1985082 - R 100 -10 -5.64274 | TCAGGGATAAAAAAA GGCCCCTG TTGAAATTG CAGGGGCC TGGTACGAGCAAGCA UTI89_C2078 1985900 - 1985154 - | copper homeostasis protein CutC yecM 1986486 - 1985914 - | hypothetical protein TERM 2768 1986655 - 1986673 + H 78 -11 -3.20382 | ATTTCTTTAACTGGT GCGGGCAA TTT TTGCTCGC TTCATCAATGTAAGG TERM 2769 1986756 - 1986777 + G 70 -10.1 -3.18264 | ATTGCGGCAGGCGCG CCTGCGGAT TGCG AACCGCAGG TTCGTCAGTCAGCAA TERM 2770 1988016 - 1988006 - g 70 -4.6 -4.57569 | overlap 1987988 GGATCTCTCCAAAAA CCGC ACC ACGG ACTACATCTTCGACT argS 1986696 - 1988429 + | arginyl-tRNA synthetase TERM 2771 1988448 - 1988471 + T 100 -12.5 -5.37345 | opp_overlap 1988448, overlap 1988439 CGTTATACGGCAACA GCCGATGTC ATTGCA GACATCGGC TTTTTTATCATTAAC TERM 2772 1988471 - 1988448 - T 83 -12.5 -3.07962 | opp_overlap 1988439 1988448 CGTTATACGGCAACA GCCGATGTC ATTGCA GACATCGGC TTTTTTATCATTAAC flhE 1988874 - 1988482 - | flagellar protein FlhE precursor flhA 1990952 - 1988874 - | flagellar biosynthesis protein FlhA flhB 1992093 - 1990945 - | flagellar biosynthesis protein FlhB TERM 2773 1990996 - 1990976 - G 72 -4.6 -4.63218 | opp_overlap 1990982 TTCTCGTTAATAAAA TCCAGGGC TTCCG GCACCGGA AGATGTGTAGGTTGT TERM 2774 1991424 - 1991440 + g 72 -4.3 -4.62783 | CATCACGAATATCCT GCCGTGA CAT TCGCAGC TTTTTCAGGTGGCTG TERM 2775 1992010 - 1992036 + g 71 -2.2 -4.9218 | opp_overlap 1992000, overlap 1992011 AGTCAGTTCACGGGA ACGCGGGA TTTGCCCCTCT TCCCGCGC TTTTTCTAGTCGGTG UTI89_C2084 1992126 - 1992272 + | hypothetical protein TERM 2776 1992292 - 1992263 - T 79 -11.5 -3.0644 | ATCCAACCTTGAAGA TCTGATGTGACGC GGCC ACGTCACATCAGG CAATACAAATCAAAA cheZ 1992946 - 1992302 - | chemotaxis regulator CheZ TERM 2777 1992877 - 1992855 - G 74 -9.8 -3.53811 | overlap 1992870 CCCAGCTCCCGCAAA CTGTCGCGCA GCA TACGCGTCAG GCTGCCGATGCGCGC cheY 1993346 - 1992957 - | chemotaxis regulatory protein CheY cheB 1994410 - 1993361 - | chemotaxis-specific methylesterase cheR 1995273 - 1994413 - | chemotaxis methyltransferase CheR tar 1997246 - 1995564 - | methyl-accepting chemotaxis protein II TERM 2778 1995955 - 1995986 + g 74 -7.4 -4.10657 | gap 1 CCGGTATCAACGCGC GAGA-CGGAGTCTTC AAT GAGGACTTTGATCTC TTTTGCCGCCTGTGC TERM 2779 1996470 - 1996447 - G 73 -9.6 -3.64822 | opp_overlap 1996420, overlap 1996466 ACGGTGTCAGTCAAA GAGCGTTGCA TATG TGAAACGCTC TGCGCCAGGTCGCCC TERM 2780 1997341 - 1997321 - R 100 -8.3 -5.67283 | opp_overlap 1997317 1997321 AATTGAAATAAAAAA CCCGATG CGCAGAT CATCGGG TTCATTTCAATTGAG TERM 2781 1997321 - 1997341 + r 72 -8.3 -3.57106 | opp_overlap 1997321, overlap 1997317 AATTGAAATAAAAAA CCCGATG CGCAGAT CATCGGG TTCATTTCAATTGAG cheW 1997873 - 1997370 - | purine-binding chemotaxis protein TERM 2782 1997416 - 1997426 + g 71 -3.2 -4.74706 | opp_overlap 1997400 AGCGCCATCTCTTCG CTGT TCA GCAG TTTTTCGATGTTCAC cheA 1999912 - 1997894 - | chemotaxis protein CheA TERM 2783 1998083 - 1998099 + gr 72 -7.9 -3.89346 | opp_overlap 1998080 1998081 ATCCACCAGCAAGGC GTAGCGG CGA CCGCCAC TTTGTAAGATCACCA TERM 2784 1999449 - 1999471 + gr 83 -11.2 -3.41527 | overlap 1999455 CTTAATCGGGTCACT GCGGATGGCG TTT CGCCTTTCGC TTCTAATGCCAGTTG TERM 2785 1999455 - 1999465 + gr 72 -8.2 -3.82083 | overlap 1999449 CGGGTCACTGCGGAT GGCG TTT CGCC TTTCGCTTCTAATGC motB 2000789 - 1999863 - | flagellar motor protein MotB TERM 2786 1999901 - 1999919 + g 85 -8.8 -4.56775 | TTGTGGGAACACTGA CCTGTGGT GCA ACCTCAGG TTTTTCCAGGGCGCT motA 2001673 - 2000786 - | flagellar motor protein MotA TERM 2787 2001773 - 2001750 - R 100 -12.5 -4.65933 | opp_overlap 2001746 TAGGGGCAAAAGAAA GCAGCGGTA CATCGT TACCGCTGC TGGAATGTTTCGCCA flhC 2002378 - 2001800 - | transcriptional activator FlhC flhD 2002740 - 2002381 - | transcriptional activator FlhD TERM 2788 2003010 - 2002991 - H 77 -9.4 -3.63515 | TGCGATTTTCAATAA TGTGTGAT GCAG ATCACACA AAACGCTCAATTACT TERM 2789 2003853 - 2003886 + G 85 -14.1 -2.75382 | gap 1, opp_overlap 2003851, overlap 2003850 AATCACAATCACAGT TTCTTTTCGC-GAGCA TCC TGCTCGGCGAAAAGAG TGATTACCTCAAGTG yecG 2003511 - 2003939 + | universal stress protein UspC otsA 2005379 - 2003946 - | trehalose-6-phosphate synthase otsB 2006202 - 2005345 - | trehalose-6-phosphate phosphatase TERM 2790 2005579 - 2005566 - GR 75 -9.5 -3.5241 | overlap 2005553 2005564 CATCGCCCAGAAATA CGGGC GTTC GCCCG ATAAAGGGAGCTTCC TERM 2791 2006273 - 2006248 - R 100 -12.6 -3.81414 | opp_overlap 2006250 ATTTGCAACGAAGAA CAGCCAACCG TTGTGG CGGCTGGCTG TGGTGGGAAAAAATG araH 2007301 - 2006312 - | L-arabinose transporter permease protein araG 2008827 - 2007313 - | L-arabinose transporter ATP-binding protein TERM 2792 2008857 - 2008883 + r 93 -10.8 -4.57341 | overlap 2008858 2008859 TCACTGGTCGTTCAC ACCCCCTCTGCA TCA TGCAGAGGGGAA TTTTTCCGGCAAATT TERM 2793 2008858 - 2008882 + r 100 -14.3 -3.33922 | overlap 2008857 2008859 CACTGGTCGTTCACA CCCCCTCTGCA TCA TGCAGAGGGGA ATTTTTCCGGCAAAT TERM 2794 2008859 - 2008881 + r 100 -17.8 -2.60032 | overlap 2008858 2008857 ACTGGTCGTTCACAC CCCCTCTGCA TCA TGCAGAGGGG AATTTTTCCGGCAAA araF 2009937 - 2008897 - | L-arabinose-binding periplasmic protein precursor TERM 2795 2009940 - 2009928 - G 77 -6.3 -4.62069 | opp_overlap 2009928 TGTGTAGGGCAAAAA CGAAT GAC ATTCG TTAAATTAATCGGAA yecI 2010683 - 2011186 + | ferritin-like protein TERM 2796 2011188 - 2011220 + T 100 -12 -4.56597 | overlap 2011190 ATCAGCTACATTGAT CATCATCGGCGCTA ATGCA TTGCGCCGATGAAG TTTTTGAGAAACCGC TERM 2797 2011190 - 2011218 + T 84 -13.2 -2.60032 | overlap 2011188 CAGCTACATTGATCA TCATCGGCGCTA ATGCA TTGCGCCGATGA AGTTTTTGAGAAACC TERM 2798 2011259 - 2011232 - T 100 -13.5 -3.86822 | opp_overlap 2011232 GAAGTTTTTGAGAAA CCGCTGCCTCA TTTTTT TGAAGCAGCGG TTTTTTAATGGGATT TERM 2799 2011232 - 2011259 + T 100 -11.3 -5.16237 | opp_overlap 2011232 GAAGTTTTTGAGAAA CCGCTGCCTCA TTTTTT TGAAGCAGCGG TTTTTTAATGGGATT yecJ 2011515 - 2011264 - | hypothetical protein TERM 2800 2011629 - 2011601 - H 72 -9.8 -3.27653 | gap 1, opp_overlap 2011602 2011609, overlap 2011609 ACCGTCATCAGAACA CAAAAAAACCTGC CGGA GCAGG-TTTTTTG TTATCGGAACATATT TERM 2801 2011602 - 2011629 + H 76 -10 -3.30007 | opp_overlap 2011601 2011609, overlap 2011609 CCGTCATCAGAACAC AAAAAAACCTGC CGGA GCAGGTTTTTTG TTATCGGAACATATT TERM 2802 2011622 - 2011609 - H 100 -8.1 -5.84432 | opp_overlap 2011602 2011609, overlap 2011601 CAGAACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 2803 2011609 - 2011622 + H 100 -8.1 -5.55769 | opp_overlap 2011609 2011601, overlap 2011602 CAGAACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 2804 2011820 - 2011793 - H 70 -7.2 -3.89607 | overlap 2011780 2011778 2011777 CATCACAAAAATCAA TCTTTATGTGAT GTAA ATCACATAAATA CCCCTTTAATGTTAT TERM 2805 2011897 - 2011909 + H 75 -9.1 -3.64488 | opp_overlap 2011896 2011894 2011884 2011897, overlap 2011896 GATGGCAAGAAATAG CGCCT GCC AGGCG TCTTTTCCGGCCATT yecR 2011980 - 2012303 + | hypothetical protein TERM 2806 2012313 - 2012335 + F 76 -10.6 -3.07816 | opp_overlap 2012306 2012305 CTCTAAACGTTTTAA TCAGCGAGGG GGA TCTTCGCTGA TTAAATAAATAGCGG ftnA 2012460 - 2012972 + | ferritin TERM 2807 2012980 - 2013002 + T 100 -17 -3.61178 | overlap 2012979 AAAACTAATGCTCTC CGGCGGCAGG TTT TCTGCCGCCG TTTCAAATCAGTGAC yecH 2013249 - 2013010 - | hypothetical protein TERM 2808 2013060 - 2013047 - G 77 -6.7 -4.57569 | opp_overlap 2013037 2013045 TGATCGGTTGAAAAA CCTTC TTCT GAAGG TATAAATTTGCCTTT TERM 2809 2014401 - 2014411 + G 72 -8.2 -3.7229 | overlap 2014399 CAATTACCTTTCTGC CGCC ACT GGCG TTTGCACTGTTTTAT tyrP 2013440 - 2014651 + | tyrosine-specific transport protein yecA 2015367 - 2014702 - | hypothetical protein TERM 2810 2015421 - 2015433 + r 78 -6.3 -4.69027 | CTTACATGCCGGTCC GTATC AGA GATAC TTTTTGAGTGGCTTT TERM 2811 2015516 - 2015503 - R 100 -8.1 -5.64274 | opp_overlap 2015503 GCAGGCACAAAAAAA CCACC CGAA GGTGG TTTCACGACACTGCT TERM 2812 2015604 - 2015624 + r 72 -10.5 -2.89742 | overlap 2015607 GCACAGCGCGAACGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2813 2015607 - 2015621 + r 72 -8.6 -3.5947 | overlap 2015604 CAGCGCGAACGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2814 2015758 - 2015780 + r 74 -7.7 -4.13767 | TCAGGCCTTTAGCCA GACATCCGC TTGAC GCCGATGTC TTTTAAACTGGAGCG TERM 2815 2015822 - 2015838 + r 74 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 2016564 - 2016016 - | phosphatidylglycerophosphate synthetase uvrC 2018453 - 2016621 - | excinuclease ABC subunit C uvrY 2019106 - 2018450 - | response regulator TERM 2816 2019356 - 2019345 - H 73 -4.4 -4.80167 | CAGCAAAAATGAAAA TCAG CCCG CTGA ATATGTAACATTAAT TERM 2817 2019717 - 2019706 - g 81 -5.8 -4.77986 | TTAAAGATGGAAAAA CAGC TTGC GCTG ATCGAAGACGAAACC yecF 2019565 - 2019789 + | hypothetical protein TERM 2818 2019828 - 2019792 - T 86 -12.4 -3.14051 | opp_overlap 2019797, overlap 2019797 CTACCGTCAGTAATA TAAAACCGGCTGAGAG CGTGC CTTTCAGCCGGTTTTT GCATCTGGCACGCAG TERM 2819 2019797 - 2019823 + T 100 -14.5 -4.70659 | opp_overlap 2019792 2019797 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTTTTGCATCTGGCA TERM 2820 2019823 - 2019797 - T 100 -12.3 -4.70583 | opp_overlap 2019797, overlap 2019792 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTTTTGCATCTGGCA sdiA 2020579 - 2019857 - | DNA-binding transcriptional activator SdiA TERM 2821 2020768 - 2020798 + r 100 -5.3 -5.70522 | gap 1, opp_overlap 2020763 2020762, overlap 2020769 2020771 CGTTTGAAATGGCGT CCCGCCCCGACTGG TGAA TC-GTCGGGGCTGA TTTTTTCTTATTATT TERM 2822 2020769 - 2020797 + r 76 -8.8 -3.98653 | gap 1, opp_overlap 2020763 2020762, overlap 2020768 2020771 GTTTGAAATGGCGTC CCGCCCCGACTGG TGAA TC-GTCGGGGCTG ATTTTTTCTTATTAT TERM 2823 2020771 - 2020795 + r 77 -10 -3.54636 | gap 1, opp_overlap 2020763 2020762, overlap 2020769 2020768 TTGAAATGGCGTCCC GCCCCGACTGG TGAA TC-GTCGGGGC TGATTTTTTCTTATT yecC 2021561 - 2020809 - | putative amino-acid ABC transporter ATP-binding protein YecC TERM 2824 2020945 - 2020919 - G 81 -6.4 -4.82901 | opp_overlap 2020940, overlap 2020921 CCTGGTCCATAAAAA TCGCCCGGTCCG CAA CATCCCGGGCAA AGCTCATTTCGTGCG yecS 2022226 - 2021558 - | putative transport system permease protein TERM 2825 2021783 - 2021771 - G 72 -7.7 -3.88291 | TACCAGGCTGATAAA GCTGT TCG ACAGC GGCGGCAACGCCACC TERM 2826 2022075 - 2022060 - G 81 -4.6 -5.08178 | overlap 2022061 ATAGAGATATAAAAA CGCGCC AGCC AGCGCA CGGGCCAGATTGGCG UTI89_C2120 2023227 - 2022241 - | D-cysteine desulfhydrase TERM 2827 2023293 - 2023312 + r 87 -4.9 -5.39755 | opp_overlap 2023294, overlap 2023294 ACGCGTAAATAAAAA AGGCGCT AGTGAA AGCGCCC TTTTTTGTCATTATG TERM 2828 2023311 - 2023294 - R 100 -8.4 -5.63517 | opp_overlap 2023293 2023294 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT TERM 2829 2023294 - 2023311 + r 75 -8.4 -3.82226 | opp_overlap 2023294, overlap 2023293 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT fliY 2024189 - 2023332 - | cystine transporter subunit TERM 2830 2023496 - 2023510 + g 84 -7.8 -4.63486 | CTTCACCGGTTACTG CCAGCG TAT CGTTGG TTTTCTTCACCAGAT TERM 2831 2023656 - 2023679 + g 79 -2.3 -5.22039 | CAGCCACTCTTCATA GTTGGTGCC CAGACC GACACCCAC TTTTTTGCCTTTCAG fliZ 2024807 - 2024220 - | protein FliZ fliA 2025536 - 2024817 - | flagellar biosynthesis sigma factor TERM 2832 2025493 - 2025481 - G 71 -9.1 -3.49653 | opp_overlap 2025480 2025479 ACCAGCGGGACATAA CGCTG CCA CAGCG AGTGTTTATCCATTA TERM 2833 2025682 - 2025666 - R 100 -15.1 -5.60993 | GCGGGCAGAAAAAAA CCCCGCC GTT GGCGGGG AAGCACATTGCTGAC fliC 2027613 - 2025856 - | flagellin TERM 2834 2026424 - 2026434 + g 77 -8.2 -4.08485 | GTAATTGAAGATGTC GCGG CAG CCGC TTTGGTTTCGCTCAA fliD 2027879 - 2029285 + | flagellar capping protein fliS 2029310 - 2029720 + | flagellar protein FliS fliT 2029720 - 2030085 + | flagellar biosynthesis protein FliT amyA 2030163 - 2031650 + | cytoplasmic alpha-amylase TERM 2835 2031655 - 2031677 + T 72 -10.5 -2.93853 | opp_overlap 2031653 2031652 2031656, overlap 2031654 AGGTGATTTAAATCC ATCCCCGGC GGCAA GCCGGGGAG ATTTCATTACGGCAG TERM 2836 2031676 - 2031656 - T 86 -14 -2.66272 | opp_overlap 2031655 2031654, overlap 2031653 2031652 GGTGATTTAAATCCA TCCCCGGC GGCAA GCCGGGGA GATTTCATTACGGCA TERM 2837 2031695 - 2031710 + T 71 -8.2 -3.85698 | TTCATTACGGCAGTG GCGTCG GTAA CGGCGC TTTATCCAGCGCGGC yedD 2032100 - 2031684 - | hypothetical protein TERM 2838 2032606 - 2032590 - g 79 -10.1 -3.72051 | opp_overlap 2032591 GCCAACAATGTCAAA CTGCGCA TGC CGCGCAG CCGTATCCGCATTAT yedE 2032284 - 2033489 + | putative inner membrane protein yedF 2033486 - 2033719 + | hypothetical protein TERM 2839 2033725 - 2033753 + F 79 -11.7 -2.78422 | opp_overlap 2033721 2033720 2033716 2033713, overlap 2033722 2033747 TCAGAAGTAATCCCT CATTCCCGCTGTG GCC CACAGCGGGAACA TCGTTACCTCTCTAT yedK 2033828 - 2034496 + | hypothetical protein UTI89_C2133 2035063 - 2036091 + | outer membrane porin protein NmpC precursor TERM 2840 2036141 - 2036106 - T 100 -14.2 -3.68529 | gap 1, overlap 2036108 ATCTGATTACTCAAA GATATGTTGTGGGAGGC TTT GCCTCCC-CAACATATA AGTGGCCCCCTCAAG TERM 2841 2036139 - 2036108 - T 100 -16.8 -3.42395 | gap 1, overlap 2036106 CTGATTACTCAAAGA TATGTTGTGGGAGGC TTT GCCTCCC-CAACATA TAAGTGGCCCCCTCA TERM 2842 2036228 - 2036247 + T 100 -13.6 -4.78107 | TTACCCTTTATTTTC TGGGGCGT TTCA ACGCCCCA TTTTTAATAATACTC ybcM 2037390 - 2036593 - | transcriptional regulator YbcM ybcL 2037951 - 2037400 - | putative kinase inhibitor emrE 2038632 - 2038120 - | multidrug efflux protein fliE 2039111 - 2038797 - | flagellar hook-basal body protein FliE TERM 2843 2038923 - 2038937 + g 93 -8.6 -4.88067 | TAGCGCCACGCCGGG TTCACC GAG GGTGAA TTTTTCTGCCTGCGT TERM 2844 2040343 - 2040327 - g 70 -5.7 -4.38472 | overlap 2040328 GGCAAATCAAAATAA CCGCCAG CAG CAGGCGA GCACCACCAGCAATA fliF 2039326 - 2040984 + | flagellar MS-ring protein fliG 2040977 - 2041972 + | flagellar motor switch protein G fliH 2041944 - 2042651 + | flagellar assembly protein H TERM 2845 2042853 - 2042881 + G 77 -6 -4.72986 | opp_overlap 2042855, overlap 2042855 ACGAAGTAGAAAGCG AAGTCGTTGGCT TTAAC GGTCAACGACTG TTTTTAATGCCGCTG TERM 2846 2042855 - 2042879 + G 74 -8.6 -3.98256 | opp_overlap 2042855, overlap 2042853 GAAGTAGAAAGCGAA GTCGTTGGCT TTAAC GGTCAACGAC TGTTTTTAATGCCGC TERM 2847 2042984 - 2042967 - g 82 -11.3 -3.55622 | opp_overlap 2042980 2042982 CTGAAGGGCTGCAAA GCGGCAA GCAG TTGCCGC TCGGTCCGGCGTTAT TERM 2848 2043246 - 2043270 + G 74 -8.5 -3.95584 | TGATGGCCCGTTACA CCCGCGCCGAT GTC ATTGTCGTGGG TTTGATTGGTGAACG fliI 2042651 - 2044024 + | flagellum-specific ATP synthase fliJ 2044043 - 2044486 + | flagellar biosynthesis chaperone TERM 2849 2045274 - 2045255 - g 76 -7.9 -4.16842 | GCCAGGGGCAACAAA GTGCAGA GTTGCG TCTGCAC CCACAGGATTTAGGT fliK 2044483 - 2045610 + | flagellar hook-length control protein fliL 2045715 - 2046179 + | flagellar basal body-associated protein FliL fliM 2046139 - 2047188 + | flagellar motor switch protein FliM fliN 2047185 - 2047598 + | flagellar motor switch protein FliN TERM 2850 2047791 - 2047770 - g 72 -10.9 -3.08211 | gap 1, opp_overlap 2047743, overlap 2047743 2047742 ACGGTCTGAAAATTA GCGC-CAGTG CTT CACTGGGCGC GCGTGAACGGGTTGT fliO 2047598 - 2047966 + | flagellar biosynthesis protein FliO fliP 2047966 - 2048703 + | flagellar biosynthesis protein FliP fliQ 2048713 - 2048982 + | flagellar biosynthesis protein FliQ TERM 2851 2049677 - 2049703 + G 72 -4.4 -4.58685 | overlap 2049679 CGGTATCTCTTTAAT GGCGGCATTAAT GCC GTTAATTGCGCC TTTTTGCGAACATTT fliR 2048991 - 2049776 + | flagellar biosynthesis protein FliR rcsA 2050066 - 2050689 + | positive DNA-binding transcriptional regulator of capsular polysaccharide synthesis, activates its own expression, subunit of RcsB transcriptional activator TERM 2852 2050685 - 2050732 + TF 80 -10.6 -3.36415 | opp_overlap 2050692 2050694, overlap 2050686 TTTTTGTCAACATGC GCTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATTAGA TTACTCTGCTTTCTC TERM 2853 2050686 - 2050731 + TF 87 -14.1 -2.61126 | opp_overlap 2050692 2050694, overlap 2050685 TTTTGTCAACATGCG CTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATTAG ATTACTCTGCTTTCT TERM 2854 2050725 - 2050692 - Tf 87 -13.9 -3.04248 | opp_overlap 2050686 2050685, overlap 2050694 CAACATGCGCTAACA CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG AATTAGATTACTCTG TERM 2855 2050723 - 2050694 - Tf 76 -10.7 -3.07522 | opp_overlap 2050686 2050685, overlap 2050692 ACATGCGCTAACACA TTCTGACTGGTGG TTTC CCACCAGTCAGGC TGAATTAGATTACTC dsrB 2050921 - 2050733 - | hypothetical protein UTI89_C2153 2050766 - 2051041 + | hypothetical protein UTI89_C2154 2051368 - 2051018 - | hypothetical protein yodD 2051069 - 2051311 + | hypothetical protein TERM 2856 2051350 - 2051328 - Gf 100 -14.9 -5.88565 | opp_overlap 2051323 TGCACAATAAAAAAA TCCCGACCC TGAGG GGGTCGGGA TGAAACTTGCTTAAG TERM 2857 2051560 - 2051548 - fH 70 -2.7 -5.00616 | TCGCTCCCGAAAAAA TCATC TTT GATAA TTTGTGCTGTTTTGA UTI89_C2156 2051609 - 2052424 + | mannosyl-3-phosphoglycerate phosphatase UTI89_C2157 2054130 - 2052421 - | hypothetical protein TERM 2858 2052489 - 2052477 - GT 81 -9.1 -4.0641 | opp_overlap 2052488 GTTTAGCGAGATAAA GCCGA CGG TCGGC CAGTGACTGGAGTTG UTI89_C2158 2054224 - 2054036 - | hypothetical protein TERM 2859 2054232 - 2054283 + r 78 -10.2 -3.64049 | gap 1, opp_overlap 2054248, overlap 2054243 ACTATCATTCATTGC AGGCATTG-GGACACCAGGCCGGAT GTG ATCCGGCCTGGTGTTAATGATACCC TTTCAAACTTCTTCC TERM 2860 2054243 - 2054271 + r 100 -23.3 -3.22491 | opp_overlap 2054248, overlap 2054232 TTGCAGGCATTGGGA CACCAGGCCGGAT GTG ATCCGGCCTGGTG TTAATGATACCCTTT TERM 2861 2054266 - 2054248 - R 89 -14.6 -2.62983 | opp_overlap 2054243 2054232 GGCATTGGGACACCA GGCCGGAT GTG ATCCGGCC TGGTGTTAATGATAC UTI89_C2159 2055464 - 2054547 - | hypothetical protein yedA 2055637 - 2056557 + | hypothetical protein vsr 2057016 - 2056546 - | DNA mismatch endonuclease, patch repair protein dcm 2058415 - 2056997 - | DNA cytosine methylase TERM 2862 2058444 - 2058424 - R 91 -13.3 -3.15999 | CCTGCATAGATTTAA CCGGCCATC TGA GATGGCCGA CAGGTTAACATAATT yedJ 2059204 - 2058482 - | hypothetical protein UTI89_C2164 2059600 - 2059217 - | hypothetical protein TERM 2863 2059558 - 2059573 + g 77 -6.2 -4.62471 | opp_overlap 2059555 GACTTAGAACCATTA TGTGAT AAAA ATCACA TTTTTCCACATTGGA TERM 2864 2059663 - 2059675 + H 76 -4.1 -5.13648 | overlap 2059658 TGAATACAGGAAAAA TCGTT TTG AGCGA TTTTATTTATCTTTG TERM 2865 2059813 - 2059829 + H 100 -13.7 -5.66684 | GTTTATATTTTTTGG GCCGGCA TGA TGCCGGC TTTTTTTATGCCTTC UTI89_C2165 2060118 - 2061263 + | outer membrane protein N precursor TERM 2866 2061336 - 2061307 - f 86 -13.7 -2.8032 | opp_overlap 2061307, overlap 2061304 2061302 TAAAACTTAACACTA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT TERM 2867 2061307 - 2061336 + F 100 -13.7 -5.4756 | opp_overlap 2061304 2061302 2061307 TAAAACTTAACACTA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT hchA 2061860 - 2062711 + | chaperone protein HchA TERM 2868 2062747 - 2062779 + T 100 -12.8 -4.62872 | gap 1, opp_overlap 2062746 2062747 AAGCGCATAATCAAT CGCAGCCGCGTTAGT ACTC AC-GACGTGGCTGCG TTTTTCACGGTTAAT yedV 2064176 - 2062818 - | putative 2-component sensor protein yedW 2064847 - 2064176 - | transcriptional regulatory protein YedW UTI89_C2169 2064980 - 2065393 + | hypothetical protein yedY 2065502 - 2066506 + | putative sulfite oxidase subunit YedY yedZ 2066507 - 2067142 + | putative sulfite oxidase subunit YedZ yodA 2067399 - 2068049 + | hypothetical protein TERM 2869 2068027 - 2068049 + F 81 -3.4 -5.44119 | overlap 2068032 GTAGCAAAGAAGTGG TCGAGGAGAT GAT GTCTCATTGA TTTTTTTGCGCTGAC TERM 2870 2068139 - 2068163 + G 100 -9.4 -5.62045 | gap 1, opp_overlap 2068136 2068139 AATAAGACAAACTCA GACACG-CTCA TGCT TGAGACGTGTC TTTTTTATTATGTCT UTI89_C2173 2068085 - 2068414 + | hypothetical protein UTI89_C2175 2068863 - 2069699 + | hypothetical protein TERM 2871 2070305 - 2070276 - g 76 -10.7 -3.36273 | GGCGCTGAATATCAA CCCGGTACAGCAG CGGG CTGCTGTACGTGG CTCACGAACACCGGA TERM 2872 2070884 - 2070872 - g 72 -5.5 -4.56597 | opp_overlap 2070872, overlap 2070874 GCCGCGGGGCAAAAA TGCGA ATG CCGCA TATCGTCCCCCTCTC UTI89_C2177 2070256 - 2071218 + | putative integrase TERM 2873 2071358 - 2071330 - T 71 -10.3 -2.72829 | opp_overlap 2071335, overlap 2071329 2071332 CACACTCTGGCAAAT TACCACCACCTCC ACA GGAGGTGGTTCTA TATAGACTTTTATCA TERM 2874 2071353 - 2071332 - T 72 -10.1 -2.90813 | opp_overlap 2071335, overlap 2071330 2071329 CACTCTGGCAAATTA CCACCACCT CCAC AGGAGGTGG TTCTATATAGACTTT TERM 2875 2071335 - 2071353 + T 100 -14.6 -3.60814 | opp_overlap 2071332 2071330 2071329 TCTGGCAAATTACCA CCACCTCC ACA GGAGGTGG TTCTATATAGACTTT ybtS 2072797 - 2071493 - | salicylate synthase Irp9 TERM 2876 2072156 - 2072126 - G 82 -9 -4.21607 | gap 1 CTGACGGAACATAAA CGAGCGCACAGGC GTGTTT GCCTGC-CGCCCG TATAACAGCGTGGCG ybtX 2074228 - 2072825 - | hypothetical protein UTI89_C2180 2075927 - 2074098 - | putative ABC transporter protein TERM 2877 2075282 - 2075313 + gr 72 -10.1 -2.91593 | overlap 2075282 2075285 CAACGATATCGCCGC TCAGACGCTGGTG CGCTTC CCCCAGCGTCTGC ATTTGTCGCCGCATC TERM 2878 2075282 - 2075314 + gr 76 -8.5 -3.86346 | gap 1, overlap 2075282 2075285 CAACGATATCGCCGC T-CAGACGCTGGTG CGCTTC CCCCAGCGTCTGCA TTTGTCGCCGCATCG TERM 2879 2075285 - 2075310 + gr 71 -10.4 -2.70354 | overlap 2075282 2075282 CGATATCGCCGCTCA GACGCTGGTG CGCTTC CCCCAGCGTC TGCATTTGTCGCCGC TERM 2880 2075825 - 2075790 - GR 91 -13.4 -3.14881 | gap 1 GAATGCCGCCAGCAA CAGCGCCAGCATACTGC GTC GCAGCATCCTGGC-CTG ACTGCCAACGCTGGA ybtP 2077689 - 2075887 - | putative inner membrane ABC-transporter TERM 2881 2077564 - 2077554 - GH 75 -4.6 -4.85599 | TCCACGCCAGAAAAA GGAG CGC CCCC AGGCTGGTTAATGCC UTI89_C2182 2077856 - 2078815 + | putative AraC type regulator TERM 2882 2078848 - 2078878 + F 100 -21.3 -3.93658 | opp_overlap 2078852 TAAACTCCTCCCTGA CAGAGGCCCGGAT ACCTC ATCCGGGCCTCTG TTCTTTCCGCCTGTT TERM 2883 2078874 - 2078852 - f 93 -15.6 -2.87132 | opp_overlap 2078848 CTCCTCCCTGACAGA GGCCCGGATA CCT CATCCGGGCC TCTGTTCTTTCCGCC TERM 2884 2078930 - 2078899 - f 100 -15.2 -3.14132 | opp_overlap 2078894, overlap 2078906 2078920 TCCGCCTGTTACCAA CCCGAAACGGGCAT AAAT AAACCCGTTTCGGG TAGCATTCAATTGTT TERM 2885 2078930 - 2078920 - f 82 -8.2 -4.55697 | opp_overlap 2078894, overlap 2078906 2078899 ACGGGCATAAATAAA CCCG TTT CGGG TAGCATTCAATTGTT TERM 2886 2080153 - 2080188 + G 70 -10.5 -2.72379 | gap 2 TTAACATCACCTTAT TCGACCGCCAGCCGCTG CACC CGGCGGTTGGCG--CGA TGCTTGCCGACTTCA TERM 2887 2080824 - 2080805 - g 70 -10.7 -2.69799 | opp_overlap 2080803, overlap 2080802 TGAGCTGACAGACTA TGCCCGC CGTTGC GCGGGCA GGTTAATCGAGTGCG TERM 2888 2080909 - 2080929 + G 72 -8.2 -3.77241 | overlap 2080921 TTGTTGCGGTTCTGG CCGTCCTG CTGGC CGGGGCGG TTTACGTTCCGGTTT TERM 2889 2081709 - 2081691 - g 70 -10.2 -3.14132 | CGGGTGGTGGATGAA CAGGGCCG GGA CTGCCCTG ACTGGGTGCCGGGTG TERM 2890 2083267 - 2083239 - g 77 -6 -4.70659 | gap 1, opp_overlap 2083241 2083242, overlap 2083241 2083242 GGCGACATTGAAAAA CAG-GTTGCCGCC CTCT GGCAGCAACTCTT ATCAACTGGCAATGT TERM 2891 2083264 - 2083241 - g 74 -8.8 -3.96999 | opp_overlap 2083241 2083242, overlap 2083239 2083242 CGACATTGAAAAACA GGTTGCCGCC CTCT GGCAGCAACT CTTATCAACTGGCAA TERM 2892 2083263 - 2083242 - g 78 -12.3 -2.97476 | opp_overlap 2083241 2083242, overlap 2083241 2083239 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 2893 2083242 - 2083263 + G 70 -10.1 -3.23393 | opp_overlap 2083242 2083241 2083239, overlap 2083241 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 2894 2084176 - 2084160 - g 86 -7.2 -5.0133 | opp_overlap 2084161 2084164, overlap 2084161 CATCGGCTGAAAAAA CGGGCG GCTGA CGCCCA TCTCACCCCGTCGGC TERM 2895 2084184 - 2084217 + G 73 -9.5 -3.60525 | overlap 2084164 2084161 GACGCCCATCTCACC CCGTCGGCCGTACTG TTGT CGGTGTGGTCAACGG TTCTCTCTGCATGGA TERM 2896 2084742 - 2084725 - g 72 -8.3 -3.78775 | TGGCCGAGGATGAAA GCGGCTG GCAA CTGCCGC TCGCCGCGCTGGTGC TERM 2897 2084813 - 2084771 - g 76 -10.5 -3.34398 | gap 1, overlap 2084769 GCCTCCCGTTAAACA CGCAGGGCA-ATGCGCAGAG CGCT CACCGCGCGTATGCCCTGAG CACTCTCAGCCACAC irp2 2078988 - 2085113 + | putative peptide synthetase-like protein TERM 2898 2085136 - 2085166 + F 76 -10.5 -3.33711 | gap 1, overlap 2085131 CAAACTGATTTTCCC CGGAACGCCATCGC GAAC GC-ATGGCGTTCCA TTGACTTTGTGAATC TERM 2899 2086125 - 2086085 - g 78 -12.5 -2.93073 | overlap 2086093 2086097 CGCGGTCAACAACGA CGGCAACAGAAAGGTCGGC TAT ACCGCCCCTTCCGTCGCAG GGCAACAGGCAGTCA TERM 2900 2086641 - 2086600 - g 90 -7.9 -4.84761 | gap 1, opp_overlap 2086607 2086608, overlap 2086603 2086604 ATAGCGGCAGAAAAA GTACCGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCGTTGC GGCGGCTGGCGACGG TERM 2901 2086637 - 2086604 - g 73 -11.7 -2.58667 | gap 1, opp_overlap 2086607 2086608, overlap 2086603 2086600 CGGCAGAAAAAGTAC CGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCG TTGCGGCGGCTGGCG TERM 2902 2086797 - 2086771 - g 100 -13.6 -3.64682 | CATTAAACCGTGAAA CCGCCGAGGCGC TCA GCGCCTGGGCCG GTGAGAAATCGGGGG TERM 2903 2087622 - 2087634 + G 75 -4.7 -4.84359 | CAGGTGGCGCATCAG CTCGG CGC CCGCG TTTTTCTGGAGATGG TERM 2904 2089971 - 2089941 - g 74 -3.2 -4.96848 | gap 1, overlap 2089942 2089943 TGGCTCAGAGAAAAA GGGGCGCGACGCA TCGCCC TGC-TGGCGCCGC GCGTGGATGAGTCAT TERM 2905 2090008 - 2090025 + G 73 -11.3 -2.67747 | overlap 2090007 GCGACGTGGAGGGCG GGCAGAC GCGC GTCTGCC GTTGTGATGTGGGCG TERM 2906 2090159 - 2090202 + G 83 -13.2 -3.02144 | gap 1 GCTTGATGACCACCA GCTGGC-TGCCGTTTTCGC GGTAAAA GCGCAGGCGGCAAGCCAGC TGTTGCAAACCCTGC TERM 2907 2090436 - 2090416 - g 78 -11.1 -3.55444 | overlap 2090417 CGGCCACGCCGGAAA TGCTGGCGA CGC TCGCCAGCC GAGGTATGGGCGCGT TERM 2908 2090435 - 2090417 - g 90 -14.6 -2.73124 | overlap 2090416 GGCCACGCCGGAAAT GCTGGCGA CGC TCGCCAGC CGAGGTATGGGCGCG TERM 2909 2090599 - 2090589 - g 71 -2.4 -4.9725 | overlap 2090575 AGCGCCACAGAAAAA GCCG CAA CGCC GGTCATTCCTCCTGC TERM 2910 2091230 - 2091216 - g 85 -11.4 -3.61398 | CTTTCCCCGGAAGAA CAGCGC ATC GCGCTG GAAAAACGGCGGCAT TERM 2911 2094409 - 2094389 - g 74 -7.5 -4.07885 | overlap 2094390 TATGGTGTCGCAAAA CCTGACGCT GCA AGCGGCAGA AACGTGGCTCGACAA irp1 2085201 - 2094692 + | HMWP1 nonribosomal peptide/polyketide synthase TERM 2912 2095187 - 2095197 + G 72 -5.4 -4.48713 | CGACAGTTGCTCTAC TCCA CTC TGGA TTTGTTGTTGCTGGC ybtU 2094689 - 2095789 + | thiazolinyl-S-HMWP1 reductase ybtT 2095801 - 2096589 + | YbtT protein TERM 2913 2097528 - 2097538 + G 72 -6.8 -4.2349 | overlap 2097535 CACCTTTGACTGTAC CCTG CAA CAGG TTTTCGGTATGGCGG TERM 2914 2098148 - 2098123 - g 100 -6.7 -5.46276 | opp_overlap 2098123, overlap 2098124 AAGATAGACAAAAAA CGCCTGACGGC TCTC GCCGTCGACCG TTATCGCCATTCTGC ybtE 2096593 - 2098170 + | yersiniabactin siderophore biosynthetic protein TERM 2915 2098217 - 2098178 - f 91 -11.5 -3.72051 | overlap 2098179 2098182 2098203 CCCAATAAGCGCAAA CCGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAGC ACCACCATTAGAAAT TERM 2916 2098216 - 2098179 - f 89 -15 -2.82749 | overlap 2098178 2098182 2098203 CCAATAAGCGCAAAC CGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAG CACCACCATTAGAAA TERM 2917 2098213 - 2098182 - f 93 -15.3 -2.66593 | overlap 2098179 2098178 2098203 ATAAGCGCAAACCGA CCCGAAACAGGTT GAAATA AACCCGTTTCGGG TAGCACCACCATTAG TERM 2918 2098213 - 2098203 - f 79 -8.2 -4.43208 | overlap 2098182 2098179 2098178 ACAGGTTGAAATAAA CCCG TTT CGGG TAGCACCACCATTAG TERM 2919 2098503 - 2098484 - g 76 -12.8 -2.60244 | overlap 2098480 GCCGGAATTAAGCGA CGCCGGCG TCAC CGCCAGCG ACAAACTCCCCAGAG TERM 2920 2099774 - 2099795 + G 70 -5.1 -4.36914 | gap 1 CTACGAAACCGCTGA CGTCAC-GCT GCA AGCCGCGACG TTTTATACCCACACC fyuA 2098302 - 2100323 + | putative pesticin receptor precursor TERM 2921 2100355 - 2100335 - f 93 -11.2 -4.15565 | opp_overlap 2100335 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 2922 2100335 - 2100355 + F 91 -11.2 -4.08945 | opp_overlap 2100335 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 2923 2101003 - 2100986 - gf 85 -2.7 -5.44721 | ATTATGTCAAAAAAA TATCAGC CATT GCTTATA ACTCATTATATGTCA UTI89_C2189 2100917 - 2101723 + | hypothetical protein UTI89_C2190 2101650 - 2101820 + | hypothetical protein UTI89_C2191 2101856 - 2103325 + | hypothetical protein UTI89_C2192 2103338 - 2103814 + | hypothetical protein UTI89_C2193 2104994 - 2103942 - | hypothetical protein TERM 2924 2104284 - 2104294 + g 76 -4 -4.88228 | TATTGGAATATCTGT TTCA CTT TGAA TTTTTGCTATTAGAT TERM 2925 2106544 - 2106554 + G 72 -5.4 -4.50627 | TGCCGGGAACTGGCA TAGC GTC GCTA TTTATTTGCTGGCTG shiA 2105309 - 2106625 + | shikimate transporter TERM 2926 2106659 - 2106628 - f 71 -9.4 -3.03159 | opp_overlap 2106628 2106627 TCAACGCGCTTAATA GCCTGGCGAAGATC ATCC GATCTTCGCCTTAC ACTTTTGTTTCACAT TERM 2927 2107505 - 2107517 + G 72 -7.7 -3.91084 | opp_overlap 2107505 2107503 2107501 2107500 GGAAAAAACACCAGA TGCCA GCA TGGCA TTTAATTACCGCTGA amn 2106727 - 2108181 + | AMP nucleosidase TERM 2928 2108237 - 2108269 + F 85 -12.1 -3.34013 | opp_overlap 2108234 2108244, overlap 2108242 2108244 TAAGTAAGACATCTG GCAAATAGCCTGC AATAAAC GCGGGCTGTTTGC TTCCTTGGGCAGATG yeeN 2108524 - 2109240 + | hypothetical protein TERM 2929 2109248 - 2109282 + T 87 -13.9 -2.88212 | opp_overlap 2109253 2109257, overlap 2109253 2109257 ATCTCTAATTATATG TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATCCTT TERM 2930 2109253 - 2109277 + T 81 -9.4 -3.8766 | opp_overlap 2109253 2109257, overlap 2109248 2109257 TAATTATATGTTAAA GAAATCTGTC TTTAT GGCAGATTTC TTTAATCTCATATAA UTI89_C2197 2109583 - 2109296 - | hypothetical protein TERM 2931 2109355 - 2109340 - G 82 -3.2 -5.24531 | ATTGCTTATAAAAAA TCCCCG TTCC CAGAGA AATAATATTTATTAA TERM 2932 2109631 - 2109603 - R 100 -11.8 -5.07011 | CACAGAAATCAAAAA CCCGACCACTTT TTTAC AAAGTGACCGGG TAAAAATAATTTTTA TERM 2933 2109632 - 2109646 + r 77 -4.4 -5.13473 | TACAAAGTGACCGGG TAAAAA TAA TTTTTA TTTTTTAACTGTCCT yeeO 2111507 - 2109870 - | hypothetical protein TERM 2934 2110760 - 2110780 + g 72 -6.2 -4.43681 | TAAGAATATTCAGGC TACCGTTA ATCAG TAGCGGTA TTTTCGTATTCCCTG TERM 2935 2111096 - 2111086 - G 85 -3.2 -5.42862 | ATAGCTGCAAAAAAA GCCA TAA TGAC CATATTGAAGCTGTC TERM 2936 2111603 - 2111621 + r 100 -11.7 -4.86133 | opp_overlap 2111603, overlap 2111612 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG TERM 2937 2111621 - 2111603 - R 93 -11.7 -4.12942 | opp_overlap 2111603 2111612 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG cbl 2112578 - 2111628 - | transcriptional regulator Cbl nac 2113597 - 2112680 - | nitrogen assimilation transcriptional regulator TERM 2938 2113151 - 2113189 + g 78 -5.4 -4.8622 | AGCCACAGGGGAATG CTCATAAATCACCGCC ATATCGA GTTGGTGATTTATCAG TTTTTCGTTAAGCAC UTI89_C2204 2114161 - 2115432 + | prophage P4 integrase TERM 2939 2115489 - 2115456 - T 72 -8.1 -3.9243 | opp_overlap 2115460 2115482, overlap 2115459 TAATCTTGTAAAGAA CCAGGCCGTATCAGC AAAC GCTGATACGGCTTTT CATCCACAGGCCGTT TERM 2940 2115486 - 2115459 - T 89 -14.2 -3.02371 | opp_overlap 2115460 2115482, overlap 2115456 TCTTGTAAAGAACCA GGCCGTATCAGC AAAC GCTGATACGGCT TTTCATCCACAGGCC UTI89_C2205 2115727 - 2115434 - | hypothetical protein TERM 2941 2115460 - 2115485 + g 100 -17.7 -4.25104 | opp_overlap 2115459 2115456, overlap 2115482 CTTGTAAAGAACCAG GCCGTATCAGC AAAC GCTGATACGGC TTTTCATCCACAGGC TERM 2942 2115482 - 2115502 + g 74 -3.2 -4.90906 | opp_overlap 2115459 2115456, overlap 2115460 CAGCAAACGCTGATA CGGCTTTT CATCC ACAGGCCG TTTTTCATCTTCTAA UTI89_C2206 2116224 - 2115712 - | hypothetical protein TERM 2943 2115989 - 2116008 + g 70 -5.8 -4.29325 | opp_overlap 2115979 TTAAATCCTTCCTCA GGAAAAAT AATA GTTTTTCC TTTTGCCTCTTGGTC UTI89_C2207 2116981 - 2116259 - | putative thioesterase UTI89_C2208 2118488 - 2116974 - | hypothetical protein UTI89_C2209 2120960 - 2118501 - | putative polyketide synthase TERM 2944 2118886 - 2118857 - G 70 -5.7 -4.41348 | overlap 2118859 2118881 TTTCCGGTAAACAAA TAGTCACTCCTCG TTGC CAAAGAGTGCCCA ACAGCGGCAGGATGT TERM 2945 2119670 - 2119641 - G 79 -4.2 -5.06414 | overlap 2119644 GGCGCTGAAGAAAAA CAGGCGGCGC TCATTTTCTT GCACCGCTTG CGCAGGCGTCTCGCA UTI89_C2210 2125445 - 2120991 - | putative peptide synthetase UTI89_C2211 2126794 - 2125355 - | hypothetical protein TERM 2946 2125793 - 2125775 - GR 71 -8 -3.73859 | CAGCACAATAGAGAA GGCCAGCG CGA CGGCGGCC CAATAGGCATTCAGC UTI89_C2212 2128343 - 2126856 - | putative amidase TERM 2947 2127126 - 2127083 - GR 100 -13.8 -3.4252 | overlap 2127120 2127121 CGCCATTGACGATAA GCTTGCGCTTACGCACCGGC TGCT GCATGTGCGCAAACGCCAGC ACCGGGCTGACAGGT TERM 2948 2128243 - 2128231 - GR 70 -4.1 -4.64766 | GCCATACGTGAAAAA TAGTG ATT CACCA ACGCCACTGAGGTGG UTI89_C2213 2134776 - 2128312 - | putative peptide synthetase TERM 2949 2130793 - 2130813 + gr 72 -4.7 -4.65895 | gap 1, opp_overlap 2130784 2130783, overlap 2130782 2130792 2130791 TAAAATGCCGTGTAC GGC-GGCA ATCTGC TGCCAGCC TTTTTCCATCACCAC TERM 2950 2133177 - 2133134 - GR 74 -7.5 -4.13767 | gap 1, opp_overlap 2133117 GGTTCGAGCGGAAAA TGCTC-GAGCAGTTGTCCCA CCGCC TGTGACAACACCTCAGAGCA CGCCAGCCAGTCACT TERM 2951 2133406 - 2133418 + gr 70 -6.2 -4.28375 | ATGTGCGGCCAGTTT CGCC AGCAG GGCG TTTTGCATCTGTTCC TERM 2952 2134680 - 2134694 + gr 87 -11.4 -3.59979 | CCAAAATGTTGCATC CGGTGC GAA GCACCG TTTCGAATGCCGCAA UTI89_C2214 2141287 - 2134787 - | putative peptide synthetase TERM 2953 2136446 - 2136466 + g 72 -4.7 -4.65895 | gap 1, opp_overlap 2136437 2136436, overlap 2136435 2136445 2136444 TAAAATGCCGTGTAC GGC-GGCA ATCTGC TGCCAGCC TTTTTCCATCACCAC TERM 2954 2136862 - 2136842 - G 87 -14.1 -3.06133 | overlap 2136830 CAACTCCCCAGCCAA CTCGATCAC CTG GTGATCGAG CCACACCTGCGGTGT TERM 2955 2136925 - 2136912 - G 70 -5.2 -4.41353 | GGACACAGAGTAAAA CGGG TTGTGT CCCG AGGGTCTTGCGCAGT TERM 2956 2139527 - 2139495 - G 72 -7.8 -3.91597 | gap 1, overlap 2139496 ACCAGACAGACCAAA CGCGCGCGTTGCA TAAGGCGT TGCAA-ACGCGCG GCAGGCTGATGAATA UTI89_C2215 2144363 - 2141331 - | putative polyketide synthase TERM 2957 2141662 - 2141634 - G 72 -6.6 -4.21275 | gap 1, opp_overlap 2141646, overlap 2141627 2141635 GTAAGGCACCGAAAA CGCCGG-ACGCGG CTGA CGGCGCACCGACG GTTCGCTAGGGATGA TERM 2958 2142794 - 2142771 - G 72 -6.6 -4.17048 | opp_overlap 2142777, overlap 2142768 CTGCCCGGAAAACAA CAGCCCCAGC CCGA GCTGTGTCTG CGCTACACCACGAGC TERM 2959 2143251 - 2143267 + g 75 -4.3 -4.83615 | opp_overlap 2143224 2143225 GGGAATTATTCCCTG CTGCACT GCC AGCGCGG TTTTTATCAACCCTG UTI89_C2216 2149224 - 2144413 - | hypothetical protein TERM 2960 2145504 - 2145481 - G 70 -6 -4.15029 | gap 1 ACCGCACAGAAACAA GCGCAG-CGAT CCC ATCGACTGAGC CAGCACAGAGAGGCT TERM 2961 2145655 - 2145625 - G 72 -9.7 -3.36273 | gap 1 TTGCGCCAATACTAA GGTACCGCCAGCGG CGAG CAGC-GGCAGTACC TCCCCGACAAAGCTA TERM 2962 2146916 - 2146894 - G 78 -11.2 -3.54436 | CAGATAGTTATACAA CGACACGCGC TGC GCACGCGCCG CCGCCAACACTCGCT TERM 2963 2147070 - 2147094 + g 72 -8.5 -3.75292 | overlap 2147073 AACGCATCGCGTCCT GATAGGCGTCA CTC TGACGCCACTC TTCTTGGTACTCCAT TERM 2964 2148880 - 2148870 - G 70 -6.8 -4.0942 | opp_overlap 2148870 2148862 TACCGATCAGACAAA CAGC GCC GCTG TTGCTCAGTATATTT TERM 2965 2148983 - 2148966 - G 81 -8.5 -4.30441 | TTACAATAGCGAAAA TGGCAAT CAGC ATTGCCA TGCCGCGCGGCAGGC UTI89_C2217 2150525 - 2149257 - | putative transacylase TERM 2966 2149449 - 2149500 + g 95 -14.4 -3.14344 | gap 1, opp_overlap 2149430 CAATTCTTTCAATTG CGCACTGGCAGCCACATCGGCGGCG CGG TGATGGCG-TGTGGCTGTCAGGGCG TTAGTGAGCAGCGTG TERM 2967 2149618 - 2149650 + g 72 -5.5 -4.57341 | opp_overlap 2149619, overlap 2149619 TTGTCAAATGCGTAA ACTGGTGCTGGATAG CGA TTCTCCAGCAGCAGG TTTTTCAGCACACTT UTI89_C2218 2151550 - 2150522 - | putative acyl-CoA dehydrogenase UTI89_C2219 2151904 - 2151656 - | hypothetical protein UTI89_C2220 2152803 - 2151934 - | putative 3-hydroxyacyl-CoA dehydrogenase UTI89_C2221 2155422 - 2152813 - | putative polyketide synthase TERM 2968 2153153 - 2153188 + g 78 -10.5 -3.48276 | opp_overlap 2153159, overlap 2153154 2153156 TCGGGTTGGGTCTCC ACACTACCCATTACC CGTCCA GGCAATGGGTAGTGG TTGTGTGCGAAGGGA TERM 2969 2153154 - 2153187 + g 84 -14 -2.68823 | opp_overlap 2153159, overlap 2153153 2153156 CGGGTTGGGTCTCCA CACTACCCATTACC CGTCCA GGCAATGGGTAGTG GTTGTGTGCGAAGGG TERM 2970 2153156 - 2153185 + g 71 -10.8 -2.88822 | opp_overlap 2153159, overlap 2153154 2153153 GGTTGGGTCTCCACA CTACCCATTACC CGTCCA GGCAATGGGTAG TGGTTGTGTGCGAAG UTI89_C2222 2165083 - 2155454 - | putative peptide/polyketide synthase TERM 2971 2155613 - 2155595 - G 70 -6.7 -4.07568 | gap 1, opp_overlap 2155598 2155609 2155610 CGGGGGCTGGCAAAA CGT-CGCC AGCT GGCGCACG GTGGCGTGGTTGTAC TERM 2972 2157788 - 2157776 - G 71 -10.5 -2.88544 | CGCCAGCGCCAGATA GCCGG TTC CCGGC AGCGTGGCGATACCG TERM 2973 2160991 - 2161008 + g 76 -4.1 -4.90079 | overlap 2160997 ATTGCCCGATCACAC TCGGC GCGGTATA GCCGA TTTTGTTATTGCCAT TERM 2974 2162168 - 2162178 + g 81 -6.8 -4.64766 | overlap 2162155 CGCCAAGTCGGCCTT GCCA CTA TGGC TTTTTGCAATCTCCG TERM 2975 2162352 - 2162388 + g 76 -9.3 -3.82098 | opp_overlap 2162350 2162351 ACCGCCTCGATAATG CCGGAGCACTCCAGCAG GCG CTGCTCGATCTCTCCGG TTTCAATTCGTTGTC TERM 2976 2162545 - 2162527 - G 86 -7.3 -4.88736 | opp_overlap 2162526 2162527 GATCAGGGACAAAAA CCGTCGC ACTTA GCGCCGG GTTGTTCTGATAGCC TERM 2977 2163126 - 2163108 - G 95 -12.4 -4.1711 | opp_overlap 2163105 2163108 2163112, overlap 2163109 ATCAGGCGCAATAAA CCGCGGTG CGC CACCGCGA TACCTTTTGGCTTAC TERM 2978 2163125 - 2163109 - G 87 -13.7 -3.09784 | opp_overlap 2163108 2163105 2163112, overlap 2163108 TCAGGCGCAATAAAC CGCGGTG CGC CACCGCG ATACCTTTTGGCTTA TERM 2979 2163245 - 2163224 - G 81 -10.9 -3.59979 | GGGCGCGACGGGAAA TGCACAGAG GTCA CTCTGCGCA ACGTTTAATGCATCT TERM 2980 2164919 - 2164883 - G 72 -7.9 -3.90922 | opp_overlap 2164891, overlap 2164884 ATGCTTTCGAAATAA CGTTTCCAGCGCCCACT TGA AGTGGGCGCTATCTACA TGCTGAGAAAAAATG TERM 2981 2164891 - 2164911 + g 100 -16.9 -2.92463 | opp_overlap 2164884 2164883 GAAATAACGTTTCCA GCGCCCACT TGA AGTGGGCGC TATCTACATGCTGAG TERM 2982 2165877 - 2165861 - g 73 -3.7 -4.81734 | opp_overlap 2165861 2165863 AAACAGCACTAAAAA GATATCA ACC TGATGTC TCATTACAATCATGG UTI89_C2223 2165689 - 2166423 + | hypothetical protein TERM 2983 2166747 - 2166735 - g 81 -6.3 -4.75472 | CTGATATTAAGAAAA TCAAG GAT CTTGA GGACGAGAACCGCCG UTI89_C2224 2166569 - 2166835 + | putative transposase TERM 2984 2167188 - 2167174 - g 75 -5.7 -4.7268 | AAACATGCAATAAAA CTGGA GTTTA TCCAG CCGGGTAAGCCGACG UTI89_C2225 2166940 - 2167419 + | putative transposase UTI89_C2226 2167410 - 2167637 + | putative transposase UTI89_C2227 2168152 - 2167727 - | hypothetical protein TERM 2985 2168394 - 2168423 + r 83 -12.3 -3.02946 | opp_overlap 2168400, overlap 2168400 AGAGGAGCCAAATTC AAAAAAGCCTGCT TTCG AGCAGGCTTTTTA CTTTCTAATTACCAA TERM 2986 2168400 - 2168417 + r 100 -11.3 -5.05505 | opp_overlap 2168400, overlap 2168394 GCCAAATTCAAAAAA GCCTGCT TTCG AGCAGGC TTTTTACTTTCTAAT TERM 2987 2168417 - 2168400 - R 100 -11.3 -5.22039 | opp_overlap 2168400 2168394 GCCAAATTCAAAAAA GCCTGCT TTCG AGCAGGC TTTTTACTTTCTAAT erfK 2169379 - 2168444 - | hypothetical protein cobT 2170520 - 2169441 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 2171311 - 2170532 - | cobalamin synthase cobU 2171817 - 2171272 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase UTI89_C2232 2172091 - 2171969 - | hypothetical protein TERM 2988 2172172 - 2172160 - R 70 -6.3 -4.17048 | TGCGCTGTAAAAGAA GTTGT AAA ACAAC GCAATAAAATTATCC UTI89_C2233 2172446 - 2172282 - | hypothetical protein TERM 2989 2173012 - 2173000 - H 82 -7.7 -4.48333 | ATAGACCAATTAAAA TGCAG TTT CTGCA GGTCAACGTCTGACC TERM 2990 2174738 - 2174718 - g 78 -7.5 -4.3898 | ACTATTCGCACAAAA TGACTGGCG ATT CGCCGATCA CTGGACATGGACAAT TERM 2991 2174762 - 2174773 + G 70 -5.8 -4.183 | GGACAATGGGAGTTC GCCA ATAC TGGC TTTCTTCAAAGTTGA TERM 2992 2175589 - 2175599 + G 72 -6.8 -4.26344 | GCACATGAAACTATT CCTG CAG CAGG TTTTAATGCAGCTAT UTI89_C2234 2173489 - 2175636 + | putative outer membrane receptor for iron compound or colicin UTI89_C2235 2175895 - 2175611 - | hypothetical protein UTI89_C2236 2175624 - 2175752 + | hypothetical protein ibrB 2176651 - 2176007 - | hypothetical protein ibrA 2177925 - 2176636 - | hypothetical protein TERM 2993 2178832 - 2178844 + H 72 -3.5 -4.93296 | opp_overlap 2178816 2178815 AAATATAAAGTATAT TTAAT AAG ATTAA TTTTTATGATAGTGA TERM 2994 2179192 - 2179177 - g 90 -7.6 -4.87803 | TATTTGCAAATAAAA GAGATG ATAT CATCTC TGGAATACATAATTG UTI89_C2239 2178850 - 2179560 + | hypothetical protein TERM 2995 2179602 - 2179621 + G 100 -10.8 -4.66609 | TATTTATCTTCATGA CCATAGCA ATGT TGCTATGG TTTTTAAGTACGCTA TERM 2996 2179868 - 2179855 - g 93 -3.8 -5.47218 | CGTCACGCAAAAAAA CACC GGTAAA GGTG GCGCACTAATGCATG UTI89_C2240 2179574 - 2180770 + | polysaccharide metabolism UTI89_C2241 2180805 - 2181329 + | putative transferase UTI89_C2242 2181283 - 2182104 + | hypothetical protein TERM 2997 2182199 - 2182244 + F 100 -22.3 -3.62046 | opp_overlap 2182199 AATTTCGGGCAATAA CTTATTCGTATAGAGCACC AGAGAAAA GGTGCTCTATACGAATAAG TTATTGCCCGAATCG TERM 2998 2182244 - 2182199 - f 100 -22.3 -3.61894 | opp_overlap 2182199 AATTTCGGGCAATAA CTTATTCGTATAGAGCACC AGAGAAAA GGTGCTCTATACGAATAAG TTATTGCCCGAATCG TERM 2999 2182475 - 2182492 + F 70 -5.5 -4.37092 | opp_overlap 2182474 2182475, overlap 2182464 2182477 CCACGCTGGGAAAAT CGCTGCT ATTC AGCAGAG TTTTGTACCGAGAAT UTI89_C2243 2182495 - 2182815 + | hypothetical protein TERM 3000 2182857 - 2182825 - T 74 -5.5 -4.67904 | opp_overlap 2182832 2182836 TATTAAGCCCAAAAA GACCTTACGCAGCTC CGG GAGCTTCGTTATATC GCGGATTAAAGAACC TERM 3001 2182832 - 2182850 + T 71 -8.8 -3.494 | opp_overlap 2182825, overlap 2182836 CCCAAAAAGACCTTA CGCAGCTC CGG GAGCTTCG TTATATCGCGGATTA UTI89_C2244 2184177 - 2183044 - | hypothetical protein TERM 3002 2185575 - 2185564 - H 70 -7.2 -3.90048 | CGGTCGTTAAAAATA CGGC AGGA GCCG GGGATGCTTTTAACG UTI89_C2245 2185780 - 2186538 + | hypothetical protein TERM 3003 2186566 - 2186545 - f 100 -13.1 -4.10144 | opp_overlap 2186545 GCAAGATAATAATAA TGGGGTAAC TCCA GTTACCCCA TTTACTATAATAGAA TERM 3004 2186545 - 2186566 + F 100 -13.1 -3.86202 | opp_overlap 2186545 GCAAGATAATAATAA TGGGGTAAC TCCA GTTACCCCA TTTACTATAATAGAA TERM 3005 2186843 - 2186829 - f 72 -5.7 -4.49644 | opp_overlap 2186829 ATTAAAAACCGAAAA GTTCC TCTCT GGAAC TGGTTTGCCGGTCTC TERM 3006 2187172 - 2187159 - f 74 -6.7 -4.35524 | GCTGGAAATGCAAAA GTAGC TGAA GCTAC GGGATCCATGCTGGT UTI89_C2246 2187560 - 2188594 + | putative phosphotriesterase-related protein TERM 3007 2188633 - 2188597 - T 85 -9.3 -4.40358 | opp_overlap 2188597 2188601 2188618, overlap 2188598 2188600 2188601 ATTGACCGCATAAAA CCATTATCCCCCGGCAC ACT GCGCCGGGGGATGTCAA TTAATACCCCGCCGT TERM 3008 2188632 - 2188598 - T 78 -10.6 -3.23733 | opp_overlap 2188597 2188601 2188618, overlap 2188597 2188600 2188601 TTGACCGCATAAAAC CATTATCCCCCGGCAC ACT GCGCCGGGGGATGTCA ATTAATACCCCGCCG TERM 3009 2188630 - 2188600 - T 91 -13.2 -3.18044 | opp_overlap 2188597 2188601 2188618, overlap 2188598 2188597 2188601 GACCGCATAAAACCA TTATCCCCCGGCAC ACT GCGCCGGGGGATGT CAATTAATACCCCGC TERM 3010 2188601 - 2188629 + T 100 -16.7 -2.56596 | opp_overlap 2188601 2188600 2188598 2188597, overlap 2188597 2188618 ACCGCATAAAACCAT TATCCCCCGGCAC ACT GCGCCGGGGGATG TCAATTAATACCCCG TERM 3011 2188629 - 2188601 - T 100 -16.7 -2.50345 | opp_overlap 2188597 2188601 2188618, overlap 2188600 2188598 2188597 ACCGCATAAAACCAT TATCCCCCGGCAC ACT GCGCCGGGGGATG TCAATTAATACCCCG UTI89_C2247 2190625 - 2190362 - | putative transposase TERM 3012 2190415 - 2190440 + g 75 -11.9 -2.87132 | opp_overlap 2190413 2190409 AAAATACAAGCCATA GCGTCTGCCCT GAGC AGGGTAGATGC TGTATCCGGCGCCGA UTI89_C2248 2191319 - 2190909 - | hypothetical protein UTI89_C2249 2191708 - 2191307 - | hypothetical protein UTI89_C2250 2192479 - 2191874 - | hypothetical protein TERM 3013 2191900 - 2191918 + g 74 -8.8 -3.87318 | TGCAGCCAAAGTTGC GCTCACCG GTG CAGTGAGC TTTGGTATGCTCCTT TERM 3014 2192472 - 2192452 - G 70 -10.5 -2.74263 | overlap 2192451 AGGTCATGGTTAAAT CTCCGTATG GTT CATACGGAA TAGCCACGTCGTAAA TERM 3015 2192621 - 2192611 - RH 71 -2.4 -5.15969 | TTTTAATGTAAAAAA CCGG TTA CGGG TAAGGCTGTGAGGAG UTI89_C2251 2193259 - 2193083 - | hypothetical protein UTI89_C2252 2193210 - 2193590 + | hypothetical protein TERM 3016 2194186 - 2194161 - g 71 -3.3 -4.74518 | gap 1, opp_overlap 2194169, overlap 2194162 2194176 AACGACGAAAACAAA CTCAGGTC-GCT AAT ATCTGACCTGAA ACAACATGGTCAGAT TERM 3017 2195166 - 2195194 + G 71 -3.2 -4.82901 | AGACGACGCTGCGAC GTTCTGTTCGC-CA TGA TGCGCGA-CGGGAC TTTTTATACCCCGCA UTI89_C2253 2194023 - 2195219 + | putative transposase TERM 3018 2195540 - 2195517 - g 76 -9.5 -3.83169 | TACAAACTCATCAAA GTTGGGGGC TTTCCT GCCCCCATC AAAATGGGGCGCAGC UTI89_C2254 2195343 - 2195621 + | hypothetical protein UTI89_C2255 2195709 - 2196317 + | hypothetical protein TERM 3019 2196361 - 2196328 - f 100 -16.1 -3.30124 | opp_overlap 2196333 GTTGATGTCTGATAA CCACAGGGCTGGC AGCAGAAA ACCAGCCCTGTGG TAAAATACAGTAATA TERM 3020 2196401 - 2196375 - f 77 -10.1 -3.46304 | overlap 2196377 GGTAAAATACAGTAA TAGCGGCGTAC ATCAG GCACGCCGCTC ACTCGTCCACAGATC TERM 3021 2196399 - 2196377 - f 90 -12.7 -3.29269 | overlap 2196375 TAAAATACAGTAATA GCGGCGTAC ATCAG GCACGCCGC TCACTCGTCCACAGA TERM 3022 2196662 - 2196641 - f 72 -10.1 -2.92371 | ACGCACTGAATCATA GCCTCCCAC CTCA GCAGGAGGC AGTCAGCTTTCAGGC UTI89_C2256 2196746 - 2197006 + | hypothetical protein UTI89_C2257 2198125 - 2197343 - | transposase/IS protein TERM 3023 2198041 - 2198055 + g 80 -11.4 -3.3506 | overlap 2198054 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA UTI89_C2258 2199144 - 2198122 - | putative transposase TERM 3024 2199095 - 2199110 + g 70 -4.6 -4.56914 | overlap 2199096 GCCCGGCTACTCATT CCCTGC TTGT GCAGGA TTTTAATTTCCATAA TERM 3025 2199167 - 2199147 - H 100 -15.5 -3.46848 | overlap 2199137 CAAAAGTGACCATAA GCTCTCCTG AAT CAGGAGAGC AGATTACCCCCTGGA UTI89_C2259 2199197 - 2199469 + | putative transposase UTI89_C2260 2200072 - 2199695 - | hypothetical protein TERM 3026 2200590 - 2200612 + H 81 -3.4 -5.41941 | overlap 2200585 2200591 2200592 CAGATTGTTCTGTAC ATTCTGTACA TCA TGTACGGAGG TTTTTGTTTGCTTTC TERM 3027 2201765 - 2201742 - g 86 -3.9 -5.40072 | GTCCTCCCAAAAAAA CTGCTGAAT GAAATG ATTGAGCAG GCGTACCAGGACTTT UTI89_C2261 2200641 - 2201813 + | hypothetical protein UTI89_C2262 2202601 - 2202344 - | hypothetical protein UTI89_C2263 2203422 - 2202655 - | putative ABC transporter UTI89_C2264 2204477 - 2203419 - | ABC transporter TERM 3028 2204457 - 2204429 - G 72 -5.1 -4.57073 | GACGCTGGCGAAAAA GCTGGCGATAGCG GTT CTCGACCGACAGC GTACTTTCCAATACA UTI89_C2265 2205488 - 2204496 - | hypothetical protein TERM 3029 2205401 - 2205420 + g 78 -7.9 -4.42386 | overlap 2205391 2205391 GCCACGGTGACGCGA TACGCAC CTCCTT GTGCGTA TTTTCTGCGTGCAGG UTI89_C2266 2207661 - 2205496 - | putative TonB dependent receptor TERM 3030 2208035 - 2208060 + H 84 -6.8 -5.06052 | gap 1 TTATCTCCGTGAATC CCCCG-CCACC TTTCC GGTGCACGGGG TTTTGTCTTTTTTCA UTI89_C2267 2208090 - 2208524 + | hypothetical protein TERM 3031 2208663 - 2208681 + F 93 -11.8 -3.97947 | opp_overlap 2208645 2208640 2208662, overlap 2208645 TCGTTACTATCATAT CGATCGTT ATA AACGATCG TTTGTAGTAAATGAC UTI89_C2268 2208742 - 2211126 + | hypothetical protein UTI89_C2269 2211123 - 2212028 + | hypothetical protein TERM 3032 2212259 - 2212276 + G 85 -8.5 -4.45544 | overlap 2212256 AATCAGGTGCTGTCG GTAAACC GATT GGTTTAC TTTTCATTGCTGAAA UTI89_C2270 2212025 - 2213095 + | hypothetical protein TERM 3033 2213115 - 2213131 + F 91 -10.1 -4.75372 | opp_overlap 2213114 2213112, overlap 2213114 2213112 GCCCCAAAGAAACGC CACCGCC TGT GGTGGTG TTTTTCCTGGCTGGT TERM 3034 2213324 - 2213308 - g 84 -3.7 -5.19879 | overlap 2213311 CGGGAAATATAAAAA TTACATC CGG GATGAAA TAAAATACTGGCGAT UTI89_C2271 2213123 - 2213908 + | hypothetical protein UTI89_C2272 2213924 - 2214334 + | hypothetical protein TERM 3035 2214478 - 2214503 + TF 100 -13.3 -5.46129 | CATTTCACCCGTCAG GCCGCGTCTTC TCCG GGAGACGTGGC TTTTTTCATTTATTA UTI89_C2274 2215469 - 2214561 - | hypothetical protein TERM 3036 2214817 - 2214801 - Gg 72 -4.3 -4.60797 | CGGGGATACACAAAA CACATGC TGC GCCTGCG CCGTAACGGAGAGAT yafZ2 2214555 - 2215376 + | hypothetical protein yafX2 2215567 - 2216112 + | hypothetical protein yeeS1 2216127 - 2216603 + | hypothetical protein yeeT1 2216672 - 2216893 + | hypothetical protein TERM 3037 2217220 - 2217183 - g 72 -7.7 -4.00042 | gap 1 TTGCTGATGAAACAA CTGGAGCTCATGCTCACC AGT GGTGAAC-TCAGCCCCCG CTATCAGCATACCGT yeeU1 2216967 - 2217335 + | hypothetical protein TERM 3038 2217646 - 2217631 - g 70 -4.7 -4.56597 | overlap 2217633 TTTCTCGTGGAAAAA TACGC GCTGGT GCGTA CCGACCAGCCGGGAT yeeV1 2217424 - 2217798 + | hypothetical protein yeeW1 2217795 - 2217989 + | hypothetical protein TERM 3039 2218146 - 2218168 + F 91 -9.9 -4.61873 | gap 1, opp_overlap 2218129 CTTCATTTCCCCTGA CGCCAGCCTG AATA CAG-CTGGCG TTTTCATTTATAAAC TERM 3040 2218326 - 2218312 - f 77 -3.6 -5.26316 | TGACCTGACAAAAAA TGAATT CCA AATCCA CGGTCTGGGTAGGAA TERM 3041 2218375 - 2218406 + F 74 -7.5 -4.24342 | gap 2, opp_overlap 2218374 2218375 2218378, overlap 2218378 GAAAACGGATTAAAG TAAGCGTC-A-ACGG AGCA CCGTATTGACGCTTA TTTATTGGTGAGAAC TERM 3042 2218603 - 2218590 - g 70 -3.7 -4.72333 | opp_overlap 2218597, overlap 2218591 AATTAGAGGTAAAAA CGCCC TACC GGGCC ATGAATCACCCGGTC UTI89_C2281 2218430 - 2218786 + | hypothetical protein TERM 3043 2218877 - 2218841 - T 83 -10.9 -3.60998 | opp_overlap 2218848, overlap 2218837 2218844 2218848 ACAGATAAGAATCAA TGAGCAATGAGGGTTGC CGG GCAACCCTCATTGAATA AAACGGGAATTACTT TERM 3044 2218874 - 2218844 - T 100 -17 -2.91042 | opp_overlap 2218848, overlap 2218841 2218837 2218848 GATAAGAATCAATGA GCAATGAGGGTTGC CGG GCAACCCTCATTGA ATAAAACGGGAATTA TERM 3045 2218848 - 2218870 + T 100 -16.4 -3.05384 | opp_overlap 2218844 2218841 2218837 2218848 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA TERM 3046 2218870 - 2218848 - T 100 -16.4 -3.30956 | opp_overlap 2218848, overlap 2218844 2218841 2218837 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA yeeX 2219282 - 2218887 - | hypothetical protein TERM 3047 2219195 - 2219178 - G 70 -5.6 -4.329 | GAACAGACGAACAAA TTCCAG TACGTC CTGGAA TGAAGGCTTGGTAGT yeeA 2220446 - 2219388 - | hypothetical protein sbmC 2221117 - 2220644 - | DNA gyrase inhibitor TERM 3048 2221526 - 2221560 + H 95 -10.8 -4.63218 | overlap 2221527 GTTCCGTACCAACCT TTTTCCCACGGTGCAA AAT TTGCACCGTAGTAAAG TTTTGTTGACCCCAA TERM 3049 2221527 - 2221559 + H 85 -12.1 -3.3761 | overlap 2221526 TTCCGTACCAACCTT TTTCCCACGGTGCAA AAT TTGCACCGTAGTAAA GTTTTGTTGACCCCA TERM 3050 2222336 - 2222325 - H 71 -4.4 -4.62069 | overlap 2222330 GGTTGAGGTGAAAAA GGAA TGTT TTCC GCCGCAAAACCAGAC sbcB 2222610 - 2224037 + | exonuclease I TERM 3051 2224067 - 2224047 - T 100 -10.4 -5.63517 | opp_overlap 2224047 GTCTGAAACAAAAAA GCCGGAGC GACAA ACTCCGGC TTTTTGAGATTTACC TERM 3052 2224047 - 2224067 + T 91 -9.7 -4.70879 | opp_overlap 2224047 GTCTGAAACAAAAAA GCCGGAG CGACAAA CTCCGGC TTTTTGAGATTTACC TERM 3053 2224081 - 2224101 + T 93 -11.9 -3.92522 | GCTTTTTGAGATTTA CCGGATGAT TAT GTCATCCGG TTTGTAAGATTACGC yeeF 2225475 - 2224111 - | transport protein YeeF TERM 3054 2225650 - 2225624 - R 91 -7.3 -5.26875 | opp_overlap 2225627, overlap 2225627 GTTTGAAGCAAAAAA TAACCGACGCT AATTA AACGTCGGTTT TTAGTCATTTTTTGA TERM 3055 2225627 - 2225647 + r 80 -6.8 -4.88129 | opp_overlap 2225624 2225627 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTTAGTCATTTTT TERM 3056 2225647 - 2225627 - R 90 -9 -4.72473 | opp_overlap 2225627, overlap 2225624 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTTAGTCATTTTT UTI89_C2287 2225788 - 2225651 - | hypothetical protein yeeY 2226686 - 2225736 - | transcriptional regulator YeeY UTI89_C2289 2227535 - 2226711 - | protein YeeZ precursor UTI89_C2290 2227872 - 2227618 - | hypothetical protein yefM 2228120 - 2227869 - | antitoxin YefM TERM 3057 2228544 - 2228518 - H 100 -20.2 -3.99405 | opp_overlap 2228518 TGAACGCATGAGAAA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG TERM 3058 2228518 - 2228544 + H 100 -19.5 -5.4505 | opp_overlap 2228518 TGAACGCATGAGAAA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG hisG 2228599 - 2229498 + | ATP phosphoribosyltransferase hisD 2229495 - 2230808 + | histidinol dehydrogenase TERM 3059 2231664 - 2231678 + G 72 -7.1 -4.16943 | opp_overlap 2231661 2231662 2231659 CACTGAAAGAGATCC CCTGC GTGGA GCAGG TTTTCGACTCTGAAA hisC 2230805 - 2231875 + | histidinol-phosphate aminotransferase TERM 3060 2232626 - 2232639 + G 70 -5.9 -4.28487 | opp_overlap 2232626, overlap 2232615 CCCTCGGCGATAAAC GCGGT ATTT GCCGC TTTGGTTTTGTGCTG hisB 2231872 - 2232942 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2232942 - 2233532 + | imidazole glycerol phosphate synthase subunit HisH hisA 2233529 - 2234269 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 2234251 - 2235027 + | imidazole glycerol phosphate synthase subunit HisF hisI 2235021 - 2235632 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 3061 2235794 - 2235769 - T 100 -14.7 -5.75945 | opp_overlap 2235769 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA TERM 3062 2235769 - 2235794 + T 100 -14.7 -4.21607 | opp_overlap 2235769 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA cld 2236831 - 2235818 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 3063 2236237 - 2236265 + g 72 -4.5 -4.65895 | GCTCCTGCGCGACCA CTTCCTGGGTTCT TAA AGAGTCCTGCAAG TTTTTCCGTCCCAGA TERM 3064 2236930 - 2236910 - R 78 -8.3 -4.0865 | GGTAACAAAAGACAA TCAGGGC GTAAATA GCCCTGA TAACAAGATGTTAGT ugd 2238107 - 2236941 - | UDP-glucose 6-dehydrogenase TERM 3065 2237759 - 2237743 - G 77 -8.7 -4.07687 | opp_overlap 2237743 2237744, overlap 2237744 ATCGCTGCGGTAAAA CCAACGG GAA CCGTTGA TTTGATTACCATAAC TERM 3066 2238325 - 2238305 - R 100 -13.3 -5.43866 | opp_overlap 2238303 TAATTGGCAAAAAAA CCCGGTGCA ATA TACACCGGG CCTCAATTTTATTGT gnd 2239760 - 2238354 - | 6-phosphogluconate dehydrogenase wbgM 2241006 - 2239903 - | putative galactosyltransferase WbgM TERM 3067 2241306 - 2241295 - R 80 -4.4 -5.19879 | opp_overlap 2241295, overlap 2241296 2241297 2241305 TTTGAAATACAAAAA TCTC AATT GAGA TTGAATTAAATTCAA wbdM 2242454 - 2241348 - | putative glycosyltransferase WbdM UTI89_C2305 2243239 - 2242451 - | putative glycosyltransferase TERM 3068 2242557 - 2242570 + g 74 -2.3 -5.07053 | opp_overlap 2242559 TTGTAATAAATCTTA AACCC CTTT GGGTA TTTTTTAAGCTGGTT wciP 2244171 - 2243236 - | putative rhamnosyltransferase TERM 3069 2243992 - 2244003 + g 72 -4.4 -4.67168 | ATCAACTAGCCGAAT TCTG GAGT CAGA TTTTTGGAAGTTTTT UTI89_C2307 2245343 - 2244153 - | bacteriophage HK620 O-antigen modification protein rfbE 2246647 - 2245400 - | putative O-antigen transporter rfbC 2247201 - 2246644 - | dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase) rfbA 2248084 - 2247209 - | glucose-1-phosphate thymidylyltransferase rfbD 2249041 - 2248142 - | dTDP-4-dehydrorhamnose reductase rfbB 2250126 - 2249041 - | dTDP-glucose 4,6 dehydratase TERM 3070 2250459 - 2250404 - g 95 -10.7 -4.52857 | gap 1 ATTGTTTATATAAAA CAACGGCAG-GAAAATTCGCAACAAA TTACT TTCGCCGCTAATCTTCACTGCCGTTA TAATTTTCTTATCAA UTI89_C2313 2250199 - 2250444 + | hypothetical protein galF 2251404 - 2250499 - | UTP--glucose-1-phosphate uridylyltransferase subunit GalF TERM 3071 2250910 - 2250923 + g 72 -8.1 -3.90112 | opp_overlap 2250910 2250909 GCGTTTTGCCAGAAC CTGGC TGCG GCCAG TTTCGTTAAAGCGCG wcaM 2252961 - 2251567 - | putative colanic acid biosynthesis protein TERM 3072 2251646 - 2251656 + g 71 -2.4 -4.88407 | opp_overlap 2251629, overlap 2251630 CTGTCGATATCGACG GAGC TTT GCCC TTTTTCATTCACTGC TERM 3073 2252923 - 2252905 - G 72 -10.3 -3.40073 | AGGGGTATGAAGGAA GGCAAGC GCCGA GCTTGCC GTCAGGAAGGTGCGT TERM 3074 2252991 - 2252979 - R 71 -7.7 -3.85698 | GTTCTCCTCTATAAA GCTTG CAG CAAGC TGGCGAGTTCTCGAT wcaL 2254192 - 2252972 - | putative colanic acid biosynthesis glycosyltransferase TERM 3075 2253608 - 2253618 + g 74 -2.4 -5.03145 | GACGATTTTTTCCCT CGGG CAG CCCA TTTTTTGCAGCCTTC TERM 3076 2254043 - 2254061 + g 75 -5.2 -4.61199 | overlap 2254046 GGCAAGGTTGTATTT CGTCCATG CCG CGTGGGTG TTTTGTGTGTCGCCT TERM 3077 2254190 - 2254178 - G 71 -3.4 -4.75404 | opp_overlap 2254178 AAATTTCAGTAAAAA GAAG CCGAC CTTC ATTTTGCCTCCCCGA wcaK 2255469 - 2254189 - | putative pyruvyl transferase TERM 3078 2254732 - 2254763 + g 75 -4.4 -4.73682 | gap 1 GAGACGTTTGTCGAA CGGTGCCAGTT-CGC GCA GGGTAATTGCCACCG TTTTCTGTTGTGCGG TERM 3079 2255611 - 2255599 - R 71 -9.1 -3.37796 | opp_overlap 2255550 2255589 2255599 CCGTAGGACGGATAA GGCGT TTT ACGCC GCATCTGGCATTCAG TERM 3080 2255723 - 2255681 - R 71 -9 -3.36968 | opp_overlap 2255686 2255696, overlap 2255696 2255697 GATCCAAGCCCAGAA CCGTAGGACGGATAAGGCGT TTT ACGCCGCATCCGGCATTCAG TGCCTGATGCGACGC TERM 3081 2255745 - 2255696 - R 76 -10 -3.37796 | gap 1, opp_overlap 2255686 2255696, overlap 2255681 2255697 CCGTAGGACGGATAA GGCGTTTTACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCT-AACGCG TCTTATCAGACCTAC TERM 3082 2255696 - 2255747 + r 83 -11.6 -3.30124 | gap 1, opp_overlap 2255681 2255696 2255697, overlap 2255686 CCGTAGGACGGATAA GGCGTTTTA-CGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTAACGCGTC TTATCAGACCTACAA TERM 3083 2255744 - 2255697 - R 86 -13.5 -2.62463 | gap 1, opp_overlap 2255686 2255696, overlap 2255681 2255696 CGTAGGACGGATAAG GCGTTTTACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCT-AACGC GTCTTATCAGACCTA TERM 3084 2255841 - 2255793 - R 83 -11.6 -3.37796 | opp_overlap 2255783 2255793 2255794, overlap 2255778 2255794 CCGTAGGACGGATAA GGCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGCG TCTTATCAGGCCTAC TERM 3085 2255793 - 2255843 + r 76 -10.5 -3.30124 | gap 2, opp_overlap 2255778 2255793 2255794, overlap 2255783 2255794 CCGTAGGACGGATAA GGCGT-TCA-CGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGCGTC TTATCAGGCCTACAA TERM 3086 2255794 - 2255840 + r 86 -13.6 -2.5294 | opp_overlap 2255778 2255794 2255793, overlap 2255783 2255793 CGTAGGACGGATAAG GCGTTCACGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 3087 2255840 - 2255794 - R 89 -15.1 -2.62463 | opp_overlap 2255783 2255793 2255794, overlap 2255778 2255793 CGTAGGACGGATAAG GCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA UTI89_C2318 2256127 - 2255816 - | ribonucleoside diphosphage reductase 1, beta subunit, B2 TERM 3088 2256012 - 2255971 - G 90 -12.9 -3.54951 | opp_overlap 2255976 2255986 2255987, overlap 2255986 2255987 GATCCGAGCACAGAA CCGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATTCAG TGCCTGATGCGACGC TERM 3089 2255987 - 2256033 + g 72 -11.4 -2.5294 | opp_overlap 2255971 2255986 2255987, overlap 2255976 2255986 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGGCGC GTCTTATAAGGCCTA wzxC 2257610 - 2256132 - | colanic acid exporter wcaJ 2259006 - 2257612 - | putative UDP-glucose lipid carrier transferase cpsG 2260478 - 2259060 - | phosphomannomutase TERM 3090 2260456 - 2260478 + gH 85 -3.4 -5.3658 | overlap 2260463 TTTTTCAGGCAATAG TTGGCCCT GACCGAA ACGGCCAA TTTTGTTTTTGTCGT UTI89_C2322 2260456 - 2260614 + | hypothetical protein cpsB 2262059 - 2260623 - | mannose-1-phosphate guanylyltransferase TERM 3091 2260973 - 2260991 + g 72 -7.4 -3.86202 | CGCGATGCACCCGAT GCTCATGG CGA CCATCAGC TTTGATCTGCTCGAC wcaI 2263285 - 2262062 - | glycosyl transferase TERM 3092 2262436 - 2262422 - G 79 -3.5 -5.0538 | opp_overlap 2262429 2262431 TTGCAGCGGAAAAAA CTGCA TGTTG CGCAG TCCACGCTGCTGCGC TERM 3093 2262429 - 2262453 + g 76 -3.5 -5.00616 | opp_overlap 2262422, overlap 2262431 GGAAAAAACTGCATG TTGCGCAGT CCACGCT GCTGCGCCA TTTTTTCCAGCCGCG TERM 3094 2262956 - 2262938 - G 70 -6.6 -4.07568 | TCCCGGCGTGCAAAA CAGCGTTG GCA CTACGCCG ATAATGCGATCCGGC wcaH 2263764 - 2263282 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 3095 2263482 - 2263472 - G 70 -6.8 -4.11692 | TAGTGAGTGGTAAAA TCCG AGC CGGA GAAGTTATCGTCATA wcaG 2264729 - 2263764 - | GDP-fucose synthetase chain A gmd 2265853 - 2264732 - | subunit of GDP-mannose 4,6-dehydratase wcaF 2266428 - 2265880 - | putative colanic acid biosynthesis acetyltransferase WcaF wcaE 2267190 - 2266444 - | glycosyl transferase wcaD 2268563 - 2267271 - | putative colanic acid biosynthesis protein TERM 3096 2268406 - 2268421 + gr 70 -6.1 -4.19238 | GTGATGGGGAAACTT TCGCC AAGCTG GGCGA TTTTGACGTTAACCA wcaC 2269683 - 2268466 - | glycosyl transferase TERM 3097 2269495 - 2269477 - GR 70 -6.7 -4.09503 | opp_overlap 2269489 AAACAGACGAAACAA CGCAATG TTCGC CATCGCG GTCATCCGCGGCGTA wcaB 2270168 - 2269680 - | putative colanic acid biosynthesis acetyltransferase WcaB wcaA 2271010 - 2270171 - | glycosyl transferase TERM 3098 2271128 - 2271095 - R 70 -10.3 -2.52464 | opp_overlap 2271085 2271122, overlap 2271105 2271107 TGCGGCGTGAACGTA GGTCGGATAAGATGC GTCA GCATCGCATCCGACA ACGGATCTCGTTATT UTI89_C2334 2273301 - 2271139 - | tyrosine kinase wzb 2273747 - 2273304 - | tyrosine phosphatase TERM 3099 2273465 - 2273496 + g 70 -5.8 -4.21194 | TGCCGCGCATCTCAG GTGCCATCTCGCAT AAGC GTTCGATATGGCGC TTTTCCATGGTCAAA wza 2274892 - 2273753 - | putative polysaccharide export protein TERM 3100 2276966 - 2276954 - g 70 -4.1 -4.72272 | overlap 2276955 CCGCTGGATGAAAAA CGTGA ATA TCACA CCATTGCCGGGCTAT UTI89_C2337 2275484 - 2277133 + | putative transport protein TERM 3101 2277173 - 2277139 - f 100 -13 -4.4017 | opp_overlap 2277141 2277146, overlap 2277141 CGAAGTGTGATAAAA CATCAAATGCGCAGGT TCA AACTGCGCATTTGATT TATACAAAATTTAGT TERM 3102 2277171 - 2277141 - f 100 -15.6 -3.80535 | opp_overlap 2277141 2277146, overlap 2277139 AAGTGTGATAAAACA TCAAATGCGCAGGT TCA AACTGCGCATTTGA TTTATACAAAATTTA TERM 3103 2277141 - 2277171 + F 100 -15.6 -3.88583 | opp_overlap 2277139 2277141, overlap 2277146 AAGTGTGATAAAACA TCAAATGCGCAGGT TCA AACTGCGCATTTGA TTTATACAAAATTTA TERM 3104 2277146 - 2277166 + F 81 -9.7 -4.13995 | opp_overlap 2277141 2277139, overlap 2277141 TGATAAAACATCAAA TGCGCAGGT TCA AACTGCGCA TTTGATTTATACAAA UTI89_C2338 2277208 - 2277546 + | hypothetical protein UTI89_C2339 2277536 - 2277826 + | hypothetical protein TERM 3105 2277869 - 2277836 - T 93 -11.8 -3.87815 | opp_overlap 2277836, overlap 2277838 GCTTAGTGCTATAAA TACAGATGGCGACA AATTGA CGCCGCCATCTGCA TAACTTGTCTTACAT TERM 3106 2277867 - 2277838 - T 88 -12.2 -3.52906 | opp_overlap 2277836, overlap 2277836 TTAGTGCTATAAATA CAGATGGCGACA AATTGA CGCCGCCATCTG CATAACTTGTCTTAC asmA 2279732 - 2277879 - | putative assembly protein TERM 3107 2278511 - 2278530 + g 74 -8.6 -3.8709 | overlap 2278512 2278518 TACCAATCTCAACGT TTTCCAGC CGTG GCTGGAAG TTTATCCGCGGATTT TERM 3108 2278866 - 2278895 + g 70 -7.1 -4.128 | GTCAAGATTCAGTTG CGGGAATTGCAGT CTCA GCTGCCATTCCGG TTTCTCTGTCAACGT dcd 2280335 - 2279754 - | deoxycytidine triphosphate deaminase udk 2281131 - 2280427 - | uridine kinase TERM 3109 2281825 - 2281850 + G 75 -4.6 -4.81551 | overlap 2281826 TGGTTATCCTGCTGA CGCCCGGAGA CGATCC TCTCAGGGCA TTTTTGATATGGGTA TERM 3110 2281942 - 2281956 + G 95 -10 -4.67353 | ATCTGCTGCGCCATC GCAACC CAC GGTTGC TTTTTGAGTCGCTGC TERM 3111 2282541 - 2282520 - g 71 -2.9 -4.75174 | overlap 2282531 TATTCAATGGAAAAA CGCTACTAC AACC GCAATGGCG ATGTTGTCTGGGCGT yegE 2281386 - 2284703 + | putative sensor protein alkA 2285662 - 2284814 - | 3-methyl-adenine DNA glycosylase II TERM 3112 2285900 - 2285882 - g 72 -5.2 -4.4874 | opp_overlap 2285883, overlap 2285883 GCTAAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG TERM 3113 2286637 - 2286624 - g 73 -3.8 -4.81249 | GGCGAAACCGAAAAA GGCA TCGCGC TGCC GATTCTGCCGTGGTG yegD 2285796 - 2287148 + | putative chaperone TERM 3114 2287195 - 2287157 - T 80 -6 -4.74103 | gap 1, opp_overlap 2287157 2287156 TCGTTAATTGAAAAA TGGCTCAG-CAGCGGCT TAAATC AGCCTTCGCCTGAGCCA GTTTTTCTGCCGCCT yegI 2289110 - 2287161 - | hypothetical protein TERM 3115 2287903 - 2287890 - G 76 -8.1 -4.18164 | AAGGCCGCAAAACAA CAGCG ATAA CGCTG ACAGTGCGATCTCAA yegK 2289859 - 2289098 - | hypothetical protein TERM 3116 2289364 - 2289348 - G 71 -9.5 -3.53444 | TCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC GGCATCTTCATCGGT TERM 3117 2289595 - 2289574 - G 72 -5.2 -4.56597 | gap 1, overlap 2289576 CCGCCTCGGCAAAAA GTCGCTGAC GAATG GTCAGC-AC AATGTCCGTTGCGAG yegL 2290515 - 2289856 - | hypothetical protein TERM 3118 2290327 - 2290337 + g 72 -5.4 -4.56597 | GAACGTCACAATGCC GAGT TCC ACTC TTTTTAAGGCCAGCG TERM 3119 2290809 - 2290828 + H 91 -11.4 -3.71649 | opp_overlap 2290808, overlap 2290819 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 3120 2290836 - 2290854 + H 81 -11.8 -3.09968 | overlap 2290848 GGAGGGGCTTTCCCG TTTCAGCG TCC CGCTGAAA TCTTCGGCTTACCTC TERM 3121 2291137 - 2291156 + H 93 -11.4 -4.35524 | opp_overlap 2291136, overlap 2291147 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTTCCGTTTCAGCG TERM 3122 2292379 - 2292355 - g 70 -4.1 -4.70169 | overlap 2292356 CGATACCGAACAAAA CGCCGTGGTGA TCC CCACCGCCGCA CTGCAAATGGGCAAC yegM 2291396 - 2292643 + | multidrug efflux system subunit MdtA TERM 3123 2292640 - 2292629 - f 80 -5.8 -5.09173 | opp_overlap 2292639 GAATACGCGAAAAAA GGAG CGCG CTCC TGATGCAGGTGTTAC TERM 3124 2292668 - 2292687 + G 72 -6.4 -4.33819 | opp_overlap 2292670 TACCTCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 3125 2293939 - 2293927 - g 81 -6.2 -4.7657 | overlap 2293919 GAAAAAGGCGAAAAA CCGC TGGCG GCGG CGCTCAAGGGCGCGG TERM 3126 2294742 - 2294752 + G 70 -6.8 -4.04318 | opp_overlap 2294736 GGAAAAACTCCAGCA GCTG CCA CAGC TTTCTGATGTCTCCA yegN 2292643 - 2295765 + | multidrug efflux system subunit MdtB TERM 3127 2296240 - 2296292 + G 79 -12.7 -3.01924 | opp_overlap 2296248 2296271 2296272 CTGTACGATTTCGCC TCGACACAGCTGGCTCCGACGATTT CGC AAATCGACGGTGTCGGTGATGTCGA TGTTGGCGGCAGCTC TERM 3128 2297830 - 2297815 - g 86 -6.1 -5.08011 | opp_overlap 2297822 2297826 AAAATCCGCAAAAAA CTGGC GACATT GCCAG AGCTGGCTGATGTTA TERM 3129 2298541 - 2298525 - g 77 -3 -5.07486 | gap 1, opp_overlap 2298525 2298527, overlap 2298527 CATCGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTTGAAG yegO 2295766 - 2298843 + | multidrug efflux system subunit MdtC TERM 3130 2300172 - 2300184 + G 72 -6.2 -4.32857 | CATGGCGTTTATCAT CGCC CTTCC GGCG TTTGTCTTTGCCAGA yegB 2298844 - 2300259 + | multidrug efflux system protein MdtE baeS 2300256 - 2301659 + | signal transduction histidine-protein kinase BaeS TERM 3131 2302090 - 2302101 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCCTG TERM 3132 2302288 - 2302276 - g 78 -5.5 -4.81551 | overlap 2302277 CAGCCACATTAAAAA CCTGC GCC GCAAG CTGGAATCTCTCGAC baeR 2301656 - 2302378 + | DNA-binding transcriptional regulator BaeR yegP 2302519 - 2302890 + | hypothetical protein UTI89_C2356 2303629 - 2303015 - | hypothetical protein UTI89_C2357 2305828 - 2303681 - | hypothetical protein TERM 3133 2304623 - 2304594 - GR 76 -6 -4.52589 | gap 1, opp_overlap 2304594 2304593 2304598, overlap 2304599 TTTTGGCAGATAAAA TTATATATCCAGA ATGAA TCTGGATA-ATAA CTTAATGCAAATTTT UTI89_C2358 2306516 - 2305800 - | hypothetical protein UTI89_C2359 2307730 - 2306516 - | hypothetical protein TERM 3134 2307613 - 2307600 - G 80 -5.3 -4.88067 | opp_overlap 2307600, overlap 2307611 AGCCATCGATAAAAA TGGTT GAGT AACCA TTTTTGGATGGTCTC TERM 3135 2307600 - 2307613 + g 75 -5.3 -4.69664 | opp_overlap 2307600 2307611 AGCCATCGATAAAAA TGGTT GAGT AACCA TTTTTGGATGGTCTC TERM 3136 2308964 - 2308950 - g 73 -9.2 -3.69395 | overlap 2308947 TTTATGATCGAAGAA GCCCAG CGT CCGGGC GAGTATATGACCGCG yegQ 2308218 - 2309579 + | hypothetical protein TERM 3137 2309713 - 2309744 + T 91 -8.1 -5.28176 | overlap 2309716 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTATGCATAAG TERM 3138 2309716 - 2309741 + T 91 -9.8 -4.73105 | overlap 2309713 GGAACCACCTCCTTA GCCTGTGTAA TCTCCC TTACACGGGC TTATTTTTTATGCAT UTI89_C2361 2310456 - 2310079 - | hypothetical protein TERM 3139 2311294 - 2311280 - g 71 -2.7 -4.77757 | opp_overlap 2311284 CCGGAAAAATTAAAA GCCGC GCTGG GTGGC GTCTCTTACATCATT UTI89_C2362 2310812 - 2311711 + | lipid kinase TERM 3140 2311786 - 2311742 - T 100 -18.8 -3.646 | gap 1 TTGAACCAGAGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTCATCCGGCAT-ACAGA ACAATACTACACCGT UTI89_C2363 2312572 - 2311793 - | hypothetical protein TERM 3141 2312415 - 2312428 + g 74 -2.3 -5.06414 | opp_overlap 2312414, overlap 2312416 GCACCGCCATGAAAG CGCGT AACC ACGCC TTTTTGTTCGAGAAA TERM 3142 2312642 - 2312669 + r 73 -9.1 -3.54424 | gap 1, opp_overlap 2312641 2312643 2312644, overlap 2312643 TCTGTTTTGCACAAT AC-CGGGCCAGC ATCAC GCTGGCCCGCGG TTTCAGGGAATGAGC TERM 3143 2312667 - 2312643 - R 93 -13.5 -3.21276 | opp_overlap 2312643 2312642, overlap 2312641 2312644 CTGTTTTGCACAATA CCGGGCCAGCA TCA CGCTGGCCCGC GGTTTCAGGGAATGA TERM 3144 2312643 - 2312668 + r 82 -12.6 -2.72511 | gap 1, opp_overlap 2312641 2312643 2312644, overlap 2312642 CTGTTTTGCACAATA C-CGGGCCAGC ATCAC GCTGGCCCGCG GTTTCAGGGAATGAG TERM 3145 2312666 - 2312644 - R 100 -17 -2.52623 | opp_overlap 2312643 2312642, overlap 2312643 2312641 TGTTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCAGGGAATG gatD 2313712 - 2312672 - | galactitol-1-phosphate dehydrogenase TERM 3146 2312822 - 2312846 + g 70 -9.9 -3.15544 | overlap 2312819 CGCCGTTTCCCACTC CTGCCCCGGCC AAG GGCTGGAGTAG TTCATCCAACTGCCG TERM 3147 2313748 - 2313732 - R 72 -9.4 -3.21218 | ACTCCTGATTATTAA GGGGGA TAACC TCCCCC TCAGGTAAAAATTAT gatC 2315115 - 2313760 - | PTS system, galactitol-specific IIC component gatB 2315403 - 2315119 - | galactitol-specific PTS system component IIB gatA 2315886 - 2315434 - | galactitol-specific PTS system component IIA gatZ 2317158 - 2315896 - | putative tagatose 6-phosphate kinase GatZ gatY 2318041 - 2317187 - | tagatose-bisphosphate aldolase TERM 3148 2317492 - 2317473 - GH 71 -3.4 -4.85599 | overlap 2317477 2317478 TCCAGTCGAGAAAAA TCAAGCGC CGGT GCGCTGGC ATACATCCCATGAGC TERM 3149 2317488 - 2317477 - GH 70 -7.2 -3.88001 | overlap 2317473 2317478 GTCGAGAAAAATCAA GCGC CGGT GCGC TGGCATACATCCCAT TERM 3150 2318078 - 2318088 + Gr 71 -2.6 -4.89966 | opp_overlap 2318078 TTCGATTTCAAAACA TAAT GAA ATTA TTTGTTTTTAAATGT TERM 3151 2318185 - 2318166 - gR 100 -11.4 -5.89947 | GAAAGGCAAAAAAAA CGGCCTCC CGGG GGAAGCCG TAACAAAGTACGCGT TERM 3152 2318218 - 2318229 + Gr 72 -7.2 -4.09685 | TTTTATGCCGGATGT GGCG TTAA CGCC TTTTCCGGCCTACGG UTI89_C2370 2318023 - 2318280 + | hypothetical protein UTI89_C2371 2319322 - 2318270 - | fructose-bisphosphate aldolase TERM 3153 2319423 - 2319435 + H 76 -4.1 -5.08011 | overlap 2319421 ACGGGCGAGTTTTTC CATCT TTT GGATG TTTTTTCAGCGTTTT TERM 3154 2319602 - 2319586 - g 85 -8.7 -4.56729 | opp_overlap 2319586 2319589 ATTAAAAGATGAAAA CAACAGC AAA GCTGTCG TTCATGATGTTTGTT TERM 3155 2320357 - 2320367 + G 70 -4.6 -4.56597 | overlap 2320366 AAATCTTCTTTATGC TGGC ATT GCCG TTTTTCACCAAACGC TERM 3156 2320596 - 2320563 - g 79 -2.3 -5.252 | TATGTCGATAAAAAA GCCCCCGTGCA TATGCGTACTGC CGCGCAGGGGC TGATCACGCTCTGCT TERM 3157 2320730 - 2320763 + G 86 -12.5 -3.4727 | CGGGATGTGGACTTT CGGCGCGGTGATGAT TGCC ATTATCGCCGTGCTG TTCATGATTTTTTTC yegT 2319579 - 2320856 + | putative nucleoside transporter YegT TERM 3158 2321170 - 2321158 - g 77 -3.3 -5.06414 | overlap 2321162 CGCCTTTAACAAAAA CGTAC TAG GTCCG ACCTCGAAGATTGCG UTI89_C2373 2320853 - 2321857 + | hypothetical protein TERM 3159 2321921 - 2321951 + G 80 -11.9 -3.33162 | gap 1, opp_overlap 2321893, overlap 2321912 CGGTGATGGTCGTCG GCG-CGGCGGTCAT TGAT GTGATCGCCGACGC TTATGCCCTCCCCTG yegV 2321854 - 2322819 + | sugar kinase YegV yegW 2323539 - 2322793 - | putative transcriptional regulator TERM 3160 2322854 - 2322902 + g 93 -11 -4.39568 | opp_overlap 2322854, overlap 2322856 ATGCTGTACTCAATA GGCCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGGTA TTTTGCTATCTAACT TERM 3161 2322856 - 2322900 + g 100 -15.8 -3.79993 | opp_overlap 2322854, overlap 2322854 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA TERM 3162 2323407 - 2323438 + g 83 -5.1 -5.12707 | gap 1, opp_overlap 2323407 2323406 CACCGGGCAAAATAT TGCCATGCTCCAGC ACCCC GCTGC-GCACGGCA TTTTTTACCGTTTCG TERM 3163 2323488 - 2323470 - G 78 -8.8 -4.25401 | CAAACTTAATATAAA GCGGCG TGTTATC CGCCGC TAAAATACGCTCGTT yegX 2324418 - 2323591 - | hypothetical protein TERM 3164 2324039 - 2324021 - G 70 -5.2 -4.41633 | opp_overlap 2324027, overlap 2324024 2324026 GACGGGGAAAAATAA TGATACGC CCC GCGCAGCA GGCCATTTTCGCGGC thiD 2325274 - 2324474 - | phosphomethylpyrimidine kinase TERM 3165 2324940 - 2324926 - G 73 -9.2 -3.57144 | opp_overlap 2324927 2324929, overlap 2324911 CCGCCGATGGTGAAA GCAGCG GGT CGCCGC TTTTTGCCAGCATAA TERM 3166 2324929 - 2324940 + g 77 -7.2 -4.57569 | opp_overlap 2324911 2324926, overlap 2324927 CCGATGGTGAAAGCA GCGG GTCG CCGC TTTTTGCCAGCATAA thiM 2326059 - 2325271 - | hydroxyethylthiazole kinase yohL 2326554 - 2326282 - | hypothetical protein TERM 3167 2326813 - 2326781 - g 70 -4 -4.65895 | overlap 2326784 CGGGGCACTCAAAAA CGATGATGGCGGCG TTTAT CATCGCCATCAAAG GCACCATTAAACAGG yohM 2326675 - 2327499 + | nickel/cobalt efflux protein RcnA TERM 3168 2327582 - 2327600 + G 74 -7.4 -4.08919 | CTCTCTGCTCGCTAA GGATGCTT TTA GGGCATCC TTTCATTTACACTTT yohN 2327538 - 2328056 + | hypothetical protein TERM 3169 2328083 - 2328063 - T 100 -8.2 -5.76949 | overlap 2328064 CATCGCTAAAAAAAA GCCCCCTC GGAGA GAGGGGGG AATGCAGACACCTTA TERM 3170 2328082 - 2328064 - T 93 -11.7 -4.05085 | overlap 2328063 ATCGCTAAAAAAAAG CCCCCTC GGAGA GAGGGGG GAATGCAGACACCTT yehA 2329172 - 2328138 - | putative Yeh fimbiral adhesin YehA precursor TERM 3171 2328885 - 2328897 + g 79 -4.1 -5.14163 | GGTCTGATTATTTGA CAACG TAA TGTTG TTTTTATTGGTCCAT yehB 2331683 - 2329188 - | putative outer membrane usher protein YehB precursor yehC 2332358 - 2331684 - | putative periplasmic chaperone YehC precursor TERM 3172 2332381 - 2332402 + r 70 -10.1 -2.5507 | opp_overlap 2332381, overlap 2332380 2332378 CCTCTTAAATTAAAA GGCCGCCAT GGAG ATAGCGGCC ATGTTAATTACCTGA TERM 3173 2332402 - 2332381 - R 100 -12.3 -4.54727 | opp_overlap 2332380 2332378 2332381 CCTCTTAAATTAAAA GGCCGCCAT GGAG ATAGCGGCC ATGTTAATTACCTGA yehD 2332981 - 2332439 - | putative Yeh fimbriae subunit YehD precursor TERM 3174 2333067 - 2333082 + r 80 -6.2 -4.84642 | CCCAAAAAGTTGCCG CAATGT AAAC ACATTG TTTTATTGATTTAAA TERM 3175 2333212 - 2333241 + r 86 -11 -3.92641 | opp_overlap 2333212 2333233 AATATCAATAAAAAA GCTTAAATCATT CATGTA AATGATTTAAGC TTTCTAAATCCGATT TERM 3176 2333241 - 2333212 - R 100 -11.7 -5.54885 | opp_overlap 2333212, overlap 2333233 AATATCAATAAAAAA GCTTAAATCATTC ATGT AAATGATTTAAGC TTTCTAAATCCGATT yehE 2333555 - 2333274 - | hypothetical protein TERM 3177 2333788 - 2333756 - R 91 -9.9 -4.85782 | opp_overlap 2333760, overlap 2333731 TGCGGCAAAAACAAA TACACCGCATCAATG TAA CATCTCTGCGGTGTA TGAAGAATAATCAGA mrp 2334927 - 2333818 - | putative ATPase TERM 3178 2335426 - 2335409 - g 93 -8.5 -4.86731 | TCGTCTGAAAGAAAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 3179 2335471 - 2335458 - g 70 -3.8 -4.60487 | opp_overlap 2335463 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTAAA TERM 3180 2336100 - 2336088 - g 76 -9.1 -3.73775 | opp_overlap 2336084 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG TERM 3181 2337006 - 2336983 - g 76 -7.5 -4.21194 | gap 1 TGGCACCACGTAAAA TGCGCTTCGG TATCT CCGAAG-GCA TGGTAATGGCTGCTG metG 2335050 - 2337092 + | methionyl-tRNA synthetase TERM 3182 2337104 - 2337123 + F 100 -10.7 -5.01553 | ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT TERM 3183 2338554 - 2338523 - g 100 -13.7 -3.84961 | GATCGAATGACGAAA GCCTGCGCTGCGT TCCCAC ACGCAGCACTGGC AGCACTGGCGGAACT TERM 3184 2339066 - 2339092 + G 70 -3.7 -4.70659 | CATGCACCGTATCAG GGGGAGTGG CATCTCAAC TCACTTCCC TTTTTACCTATGCAA TERM 3185 2340239 - 2340225 - g 74 -2.1 -5.04868 | CCAAACCAAACAAAA GCGAT GATGA ATCAC AGGCGAACGATGCTG TERM 3186 2340452 - 2340442 - g 70 -6.8 -4.10657 | opp_overlap 2340437 2340442 TTATAGCGCCGAAAA CCAG CTA CTGG CTTGCTTTCGCGTAG TERM 3187 2340572 - 2340590 + G 82 -7.4 -4.58395 | opp_overlap 2340563 ATATCACCGACGGAT GCTGCC GCCTTCG GGCAGC TTTTTGCCGACTACG TERM 3188 2340721 - 2340704 - g 72 -5.5 -4.45083 | overlap 2340706 TGGACAGGCAGAAAA TGCCCGA GTGG TCGGGTA ATGGGGCTGGCGAAT UTI89_C2389 2337233 - 2341021 + | hypothetical protein TERM 3189 2342060 - 2342026 - g 71 -2.1 -4.90217 | gap 1, overlap 2342027 TAAATACAGTAAAAA CTTCCCCCA-TGCGAC GCTC GCCGCACTGGCAGAAC TGCTGGCGTTAAAAG TERM 3190 2342132 - 2342119 - g 81 -4.5 -5.10767 | CATCGAAGACAAAAA GCTGC CTGC ACAGC AAAAAGCACGTGATG TERM 3191 2342359 - 2342349 - g 100 -2.4 -5.8187 | GAGGTAAGAAAAAAA CGGC ATT GCTG CGCCTTGATTTAGTG yehI 2341031 - 2344663 + | hypothetical protein TERM 3192 2344695 - 2344668 - f 71 -7.7 -3.73042 | opp_overlap 2344671, overlap 2344666 2344670 2344671 TTTTCCATTAAAACA CAGCGGGCAGT GATGCA ACTGCCCGTTA TCAACACGACCTACC TERM 3193 2344671 - 2344692 + F 83 -11.6 -3.28791 | opp_overlap 2344671 2344670 2344668 2344666 TCCATTAAAACACAG CGGGCAGT GATGCA ACTGCCCG TTATCAACACGACCT TERM 3194 2344692 - 2344671 - f 77 -11.6 -2.66321 | opp_overlap 2344671, overlap 2344670 2344668 2344666 TCCATTAAAACACAG CGGGCAGT GATGCA ACTGCCCG TTATCAACACGACCT UTI89_C2391 2344724 - 2344909 + | hypothetical protein TERM 3195 2345149 - 2345127 - f 79 -12.1 -2.72049 | opp_overlap 2345131, overlap 2345131 GACAGGGGTGAACGA CAAATCCGC ATGGA GCGGATTTG AACGCTACTTGTAGC TERM 3196 2345145 - 2345131 - f 72 -7.1 -4.05446 | opp_overlap 2345131, overlap 2345127 GGGGTGAACGACAAA TCCGC ATGGA GCGGA TTTGAACGCTACTTG TERM 3197 2345276 - 2345257 - f 77 -9.3 -3.75461 | opp_overlap 2345252 2345248 2345257 TAAAGCTTTATTAAA GGGGGAA ACGGTA TTCCCCC TTAAATGCGTTTCAA TERM 3198 2345709 - 2345677 - f 72 -8.6 -3.63968 | opp_overlap 2345677 2345685, overlap 2345682 2345685 CGTCAAAGTTGTAAA TAAAAGAACCTGCC TCACC AGCAGGTTTTTTTA TTTTTTGCGATCTGC TERM 3199 2345677 - 2345709 + F 93 -10.1 -5.07567 | opp_overlap 2345677 2345682 2345685, overlap 2345685 CGTCAAAGTTGTAAA TAAAAGAACCTGC CTCACCA GCAGGTTTTTTTA TTTTTTGCGATCTGC TERM 3200 2345704 - 2345682 - f 74 -4.1 -4.88405 | opp_overlap 2345677 2345685, overlap 2345677 2345685 AAGTTGTAAATAAAA GAACCTGCC TCACC AGCAGGTTT TTTTATTTTTTGCGA TERM 3201 2345701 - 2345685 - f 72 -5.8 -4.54026 | opp_overlap 2345677 2345685, overlap 2345682 2345677 TTGTAAATAAAAGAA CCTGCC TCACC AGCAGG TTTTTTTATTTTTTG TERM 3202 2345685 - 2345701 + F 100 -5.1 -6.28401 | opp_overlap 2345685 2345682 2345677, overlap 2345677 TTGTAAATAAAAGAA CCTGC CTCACCA GCAGG TTTTTTTATTTTTTG TERM 3203 2346671 - 2346652 - g 81 -5 -5.08255 | overlap 2346653 ACGGCGAAAAGAAAA CGTCAATG GATA CACTGACA GCGATTATGTCCACC yehL 2345754 - 2346908 + | hypothetical protein yehP 2349121 - 2350320 + | hypothetical protein TERM 3204 2350365 - 2350384 + G 70 -4.2 -4.63218 | opp_overlap 2350351, overlap 2350366 ACACCACAGGCACTG ACGGCGTT AAGC AATGCCGG TTTTGTTAAGCGCAG TERM 3205 2351926 - 2351938 + G 70 -5.5 -4.36914 | overlap 2351917 CCGTGAGCCTGGTTT CTGGC TTT GTCAG TTTTGTAGAGGGGCA TERM 3206 2352006 - 2351989 - g 93 -8.3 -4.93296 | TGATGATGACAAAAA CCCGCGC CTGG GCGCTGG ACGCAGAAACTGCGC TERM 3207 2352180 - 2352193 + G 75 -4.5 -4.85599 | opp_overlap 2352179, overlap 2352179 TTGCTGGCGAATGAC CTCAC CGCG GTGGG TTTTTATCGGCTGGC yehQ 2350317 - 2352320 + | hypothetical protein TERM 3208 2352399 - 2352415 + F 81 -10.9 -3.46081 | opp_overlap 2352395 TATCCTATATAGCCC CTGGTGA GAG TCACCAG TTCCTTGATTAAATA TERM 3209 2352564 - 2352538 - g 84 -8 -4.62392 | GAAGAATCAAAGAAA TTCAGCGCCAAT CTG AACGGCACTGAA ATTGCCATTACCTAT yehR 2352433 - 2352906 + | lipoprotein YehR precursor yehS 2353474 - 2352947 - | hypothetical protein yehT 2354198 - 2353464 - | putative two-component response-regulatory protein YehT yehU 2355880 - 2354180 - | putative 2-component sensor protein yehV 2356087 - 2356818 + | putative transcriptional regulator UTI89_C2400 2356878 - 2356985 + | hypothetical protein yehW 2357697 - 2356966 - | putative transport system permease protein TERM 3210 2357389 - 2357365 - G 72 -8.5 -3.83026 | TGGTTTCAGACCAAA GCCGATCACCG GAA CGGCAATCGCC AGCACTGCAACGGGC TERM 3211 2357474 - 2357452 - G 76 -9 -3.75169 | CACCAGTGGACGAAA TCCCGCGCCC CAA GGGCGAGTGA CAGCAATTCCGGCAC yehX 2358628 - 2357702 - | ABC transporter ATP-binding protein yehY 2359778 - 2358621 - | ABC transporter permease TERM 3212 2359605 - 2359591 - G 75 -5.6 -4.64676 | overlap 2359567 2359593 TTAGCGGGAATAAAA CAGGCT GTC AGCCAG GCGCAACCAACGCCC TERM 3213 2359717 - 2359707 - G 74 -8.2 -3.97368 | overlap 2359708 TGCGTAACTGATAAA CGGC AGC GCCG CTGCGATTGCCGTCA yehZ 2360702 - 2359785 - | hypothetical protein TERM 3214 2359862 - 2359879 + g 79 -3.5 -5.14563 | gap 1 CCACTGCAATGCTGG CATT-CAG CTG CTGCAATG TTTTTTCATCGAGGC UTI89_C2405 2360885 - 2360733 - | hypothetical protein bglX 2363189 - 2360892 - | beta-D-glucoside glucohydrolase TERM 3215 2361040 - 2361058 + g 75 -6.6 -4.37658 | CTGACGGTCTGAGTT TCGCCCGG TTT CAGGGTGA TTTTCTCAAAGCCTT TERM 3216 2361903 - 2361876 - G 70 -9.8 -3.16785 | overlap 2361874 2361872 TAGCACAGTAACAGA TTGATCGGCGAC ACCT GCCGCCGACCAG CTTCCCATCACGTCA dld 2363385 - 2365100 + | D-lactate dehydrogenase TERM 3217 2365133 - 2365104 - T 100 -10.1 -5.33026 | gap 1, opp_overlap 2365104 2365100 2365105 2365107, overlap 2365105 GAAGTGAAATAAAAA TTACGGATGGCAGA GTA TC-GCCATCCGTAC TTCATTTAATCGTTC TERM 3218 2365104 - 2365133 + T 78 -10.1 -3.59233 | gap 1, opp_overlap 2365104 2365105, overlap 2365100 2365105 2365107 GAAGTGAAATAAAAA TTACGGATGGCAGA GTA TC-GCCATCCGTAC TTCATTTAATCGTTC TERM 3219 2365132 - 2365105 - T 100 -13.6 -3.78189 | gap 1, opp_overlap 2365105 2365104 2365100 2365107, overlap 2365104 AAGTGAAATAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGTA CTTCATTTAATCGTT TERM 3220 2365105 - 2365132 + T 86 -13.6 -2.74817 | gap 1, opp_overlap 2365104 2365105, overlap 2365104 2365100 2365107 AAGTGAAATAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGTA CTTCATTTAATCGTT TERM 3221 2365107 - 2365130 + T 80 -11.8 -2.91027 | gap 1, opp_overlap 2365105 2365104, overlap 2365105 2365104 2365100 GTGAAATAAAAATTA CGGATGGCAGA GTA TC-GCCATCCG TACTTCATTTAATCG pbpG 2366080 - 2365139 - | D-alanyl-D-alanine endopeptidase TERM 3222 2365167 - 2365183 + g 100 -10.8 -5.8096 | overlap 2365151 GCCGTCTGCCCCGCC GCCGCC ATTTG GGCGGC TTTTTGTTTTTTATA TERM 3223 2365684 - 2365694 + g 81 -8.2 -4.3739 | opp_overlap 2365669 GGTGCGCAAGACTTG CCGC CGC GCGG TTTTCTGAAGACATC TERM 3224 2366232 - 2366197 - R 100 -14.8 -3.75015 | overlap 2366198 AGAATCGTGAGGAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAGCG CAAAAGAACTTTCTA TERM 3225 2366231 - 2366198 - R 100 -18.3 -2.84527 | overlap 2366197 GAATCGTGAGGAAAT GCTGCATTGCTGACA TTTA CGCCAGCAATGCAGC GCAAAAGAACTTTCT yohC 2366856 - 2366245 - | hypothetical protein yohD 2366966 - 2367580 + | hypothetical protein TERM 3226 2367576 - 2367562 - T 80 -5.6 -5.06414 | GCGCGGGAAGAAAAA GCCGGA TCA TCAGGC GTAAAACTATTGCCC UTI89_C2411 2368461 - 2367700 - | acetoin dehydrogenase yohG 2369950 - 2368514 - | multidrug resistance outer membrane protein MdtQ TERM 3227 2368600 - 2368586 - G 73 -9.2 -3.61398 | CTGCCCTTGCAATAA CAGGCC ATT GGCCCG CTCACGCAGCGCCGG TERM 3228 2368670 - 2368651 - G 77 -12.1 -2.81815 | overlap 2368648 GGGAACCAGCAATGA GGCCCGC GTTAAA GCGGGCC TGCGCAAGACCTACT TERM 3229 2369003 - 2368988 - G 70 -4.6 -4.46926 | GATGTCAGGATAAAA TGCCGC TTTT GCCGCA TCAATAGTGCTTAAC TERM 3230 2370500 - 2370539 + r 100 -17.2 -2.71364 | TTCGCCAGAGCCCGG GGGTGCAGGGGGAGGA GGCGATTG TCCTCCCCCTGCGCGC TCCTTGCGCCAGTGG yohI 2371661 - 2370645 - | tRNA-dihydrouridine synthase C TERM 3231 2371637 - 2371615 - G 100 -12 -5.42259 | overlap 2371616 TCACCCGCAAAAAAA TGAGGCGCTA TGT TAGCGCCTCC GGTCAACGGATTAAA TERM 3232 2371636 - 2371616 - G 100 -15.5 -3.84633 | overlap 2371615 CACCCGCAAAAAAAT GAGGCGCTA TGT TAGCGCCTC CGGTCAACGGATTAA TERM 3233 2371690 - 2371663 - H 100 -14.2 -3.56594 | opp_overlap 2371663 2371658 2371665 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 3234 2371663 - 2371690 + H 89 -14.2 -3.0281 | opp_overlap 2371663, overlap 2371658 2371665 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 3235 2371665 - 2371688 + H 76 -11 -3.06361 | opp_overlap 2371663, overlap 2371663 2371658 AAAGGTCTGCAAAGA GGGATTGCTG CAAA CTGCAATCCC TCTCTATGCTTGATG TERM 3236 2371890 - 2371909 + G 90 -9.3 -4.4959 | TTTCGTCCTGATTTA TGCCTGC CTGTAT GCAGGCA TTTTCATTGCTTCCC yohJ 2371798 - 2372232 + | hypothetical protein yohK 2372229 - 2372924 + | hypothetical protein TERM 3237 2372934 - 2372944 + F 80 -6.8 -4.82154 | overlap 2372929 GGCTAAAATTTGCGA TGCG TCG CGCA TTTTTGATGTAAGTT cdd 2373054 - 2373938 + | cytidine deaminase TERM 3238 2374006 - 2374022 + F 86 -10.9 -4.15044 | opp_overlap 2374004 TGGTGTCGAAAATCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC TERM 3239 2374679 - 2374689 + G 79 -4.6 -5.00884 | opp_overlap 2374679 CTTTATATTTTTAAA CGTG AAC CGCG TTTTTTAGGGCCGCT sanA 2374088 - 2374807 + | hypothetical protein TERM 3240 2374940 - 2374923 - g 75 -5.5 -4.60924 | opp_overlap 2374925, overlap 2374925 TAAACGGGTTAAAAA TGCACCG GAAC CGGTGTA TGTCTGGCGAGCGAA UTI89_C2418 2374810 - 2375049 + | hypothetical protein TERM 3241 2375540 - 2375550 + G 85 -6.8 -4.76123 | CCCATTGATATCGGT CGCT TAC AGCG TTTTGTTACTGATTT yeiT 2375243 - 2376481 + | putative oxidoreductase TERM 3242 2376978 - 2376967 - g 70 -5.8 -4.25104 | TGTCGGGCAGTAAAA CGTG GTTC CACG CTGCCAATGCTGGCG yeiA 2376469 - 2377710 + | dihydropyrimidine dehydrogenase TERM 3243 2377813 - 2377846 + T 81 -9.5 -3.98282 | overlap 2377814 2377826 GTTGTGCTCATTGTA GGCCGGATAAAACGC GCCA GCGTTGCATCCGGCA TTTGGTTCCTGTCGC TERM 3244 2377814 - 2377845 + T 86 -13 -2.98487 | overlap 2377813 2377826 TTGTGCTCATTGTAG GCCGGATAAAACGC GCCA GCGTTGCATCCGGC ATTTGGTTCCTGTCG mglC 2378963 - 2377953 - | beta-methylgalactoside transporter inner membrane component TERM 3245 2378988 - 2379025 + r 74 -4.1 -4.96848 | opp_overlap 2378994 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGCTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2380499 - 2378979 - | galactose/methyl galaxtoside transporter ATP-binding protein TERM 3246 2379859 - 2379874 + g 78 -7.6 -4.38154 | opp_overlap 2379858 2379859 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGCGAGATAT TERM 3247 2380551 - 2380529 - R 100 -14.9 -3.88232 | opp_overlap 2380542, overlap 2380542 TTGGCCATACAATAA GGGCGCAGT AAACG ACTGCGCCC AATCAGTCTTATTTC mglB 2381558 - 2380560 - | galactose-binding transport protein TERM 3248 2380661 - 2380677 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAGATCA galS 2382884 - 2381838 - | DNA-binding transcriptional regulator GalS TERM 3249 2382981 - 2382992 + Gr 70 -3.6 -4.63932 | TCACAGCAATGGAAA CGGT TACA GCCG TTTTGTTAACGAATG UTI89_C2426 2384177 - 2383020 - | hypothetical protein UTI89_C2425 2382868 - 2383071 + | hypothetical protein TERM 3250 2383407 - 2383389 - GT 75 -8.8 -3.8186 | CATCTGAAGTAAGAA GGCGCACC AAC GATACGCC CAGTCCAGTCGCCAT TERM 3251 2383773 - 2383789 + gT 70 -3.6 -4.59773 | CAGATAAAGCATGAC GCCGGT ATTAA ACAGGC TTTTTACCGATGGCG TERM 3252 2384080 - 2384110 + gT 73 -9.1 -3.44848 | gap 1, opp_overlap 2384083 2384084, overlap 2384078 2384084 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAGC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 3253 2384107 - 2384083 - GT 81 -10.8 -3.51924 | gap 1, opp_overlap 2384080 2384078 2384084, overlap 2384084 GCGGGATTGAGATAA GCCGCCTTTGG TAGC CCAAAGGCG-C TGATGTTTAATAGCA TERM 3254 2384107 - 2384084 - GT 74 -11 -2.7094 | opp_overlap 2384080 2384078 2384084, overlap 2384083 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA TERM 3255 2384084 - 2384107 + gT 75 -11 -2.87501 | opp_overlap 2384083 2384084, overlap 2384080 2384078 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA folE 2384862 - 2384194 - | GTP cyclohydrolase I yeiG 2385120 - 2385956 + | hypothetical protein TERM 3256 2385963 - 2385978 + T 79 -11.8 -2.56271 | opp_overlap 2385959 2385960, overlap 2385962 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA cirA 2388060 - 2385988 - | colicin I receptor TERM 3257 2386168 - 2386182 + g 78 -9.2 -3.87373 | CGGTGTTTTAGCCGT CGCGCT GTC GGCGCG TTTCTGCCCGGTATA TERM 3258 2386349 - 2386370 + g 72 -5.9 -4.30448 | overlap 2386362 TAGTTGATCGACAGT TTCCATTCA TCGT TGAACGGAA TTTTCAGTTCGGTTT TERM 3259 2388249 - 2388230 - R 100 -13.6 -4.75776 | AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA lysP 2389740 - 2388271 - | lysine transporter TERM 3260 2389168 - 2389133 - G 70 -6.8 -4.08945 | gap 1, opp_overlap 2389143 2389144, overlap 2389144 ATCATCGCCGCAAAA CCACCAG-CAAACGGCG CTT CGCCGATTGTCCAGTTG CTCCAGCCCGCAGGC TERM 3261 2389156 - 2389144 - G 84 -10.5 -3.83705 | opp_overlap 2389144 2389143, overlap 2389133 AAAACCACCAGCAAA CGGCG CTT CGCCG ATTGTCCAGTTGCTC UTI89_C2431 2389972 - 2389724 - | hypothetical protein yeiE 2390826 - 2389945 - | putative DNA-binding transcriptional regulator TERM 3262 2389995 - 2389984 - GH 70 -7.2 -3.92602 | GCAATAGTCCAGAAA GCGC CGTA GCGC GTTGGAAAGGTGTTT TERM 3263 2391622 - 2391596 - g 75 -6.6 -4.42386 | CCCGGATGCAGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 3264 2391894 - 2391876 - g 71 -2.2 -5.00884 | AGCGCGCTGAAAAAA GCCGGGGC GAA ACCTCTGC TGATGGCACTGGTAC yeiH 2390925 - 2391974 + | hypothetical protein nfo 2392048 - 2392905 + | endonuclease IV TERM 3265 2393304 - 2393294 - g 78 -8.2 -4.18934 | overlap 2393295 CATTACTGGAAGAAA CGCG CCG CGCG GGCGTGAACGTTTCA yeiI 2392909 - 2393997 + | hypothetical protein TERM 3266 2394253 - 2394218 - T 93 -11.8 -3.96148 | opp_overlap 2394220, overlap 2394220 TCTGCCCATCATAAA TAGCCGGGCCTGCATC TTGC GATACTGACCCGGCTT GTTATCAACACTTAA TERM 3267 2394251 - 2394220 - T 100 -14.4 -3.57406 | opp_overlap 2394220, overlap 2394218 TGCCCATCATAAATA GCCGGGCCTGCATC TTGC GATACTGACCCGGC TTGTTATCAACACTT TERM 3268 2394220 - 2394251 + T 80 -10 -3.79678 | opp_overlap 2394218 2394220 TGCCCATCATAAATA GCCGGGCCTGCATC TTGC GATACTGACCCGGC TTGTTATCAACACTT rihB 2395206 - 2394265 - | ribonucleoside hydrolase 2 TERM 3269 2394319 - 2394342 + g 100 -11.8 -4.66537 | opp_overlap 2394316 2394319 TAATCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTTGTATTGGCGGG TERM 3270 2395413 - 2395439 + G 71 -2.1 -5.02074 | opp_overlap 2395413, overlap 2395418 TTGCTTTTCAACGGA TGTTTCAGCCG ATACG CGGCTGTTTCA TTTTTTAGCGCGTGA TERM 3271 2395418 - 2395434 + G 86 -9.4 -4.42765 | opp_overlap 2395413, overlap 2395413 TTTCAACGGATGTTT CAGCCG ATACG CGGCTG TTTCATTTTTTAGCG TERM 3272 2395477 - 2395491 + G 76 -7.8 -4.18018 | GTGCAGGAAGGGCAA CAGCCG TCC TGGCTG TTTTACCTGACGCGA TERM 3273 2395497 - 2395518 + G 73 -11.5 -2.79175 | overlap 2395496 GTCCTGGCTGTTTTA CCTGACGCG AGGC CGCGCCAGG CTTTACGTCACGCTT yeiL 2395336 - 2396034 + | DNA-binding transcriptional activator YeiL yeiM 2397351 - 2396101 - | transport protein YeiM TERM 3274 2396562 - 2396579 + g 70 -6.9 -4.08216 | overlap 2396560 ATGCCATTACCACCG TCGCCAC ACCG GCGGCGA TTTTCAGCCCAGTCA TERM 3275 2397339 - 2397356 + g 70 -5.7 -4.30014 | TCCCCACAACACTTC TCATTAT ATCC ATAATGA TTTTCCCTTCATGCC TERM 3276 2397395 - 2397378 - R 80 -10.5 -3.74693 | opp_overlap 2397378 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTTTGA TERM 3277 2397378 - 2397395 + r 87 -8.3 -4.46493 | opp_overlap 2397378 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTTTGA yeiN 2398383 - 2397445 - | hypothetical protein TERM 3278 2397484 - 2397496 + g 73 -9.1 -3.61517 | TTTGGCAATTTCGCT CGCCA GAA TGGCG TTATTAAAGACCAGT yeiC 2399426 - 2398371 - | hypothetical protein TERM 3279 2399580 - 2399561 - gR 95 -9.3 -5.10461 | opp_overlap 2399574 GGCAGGCAAGAAAAA GGGCAGA GATGTT TCTGCCC TCAGATTGTTGACAA TERM 3280 2399714 - 2399767 + Gr 89 -12 -3.6185 | gap 2, opp_overlap 2399712 GCGCATCAGGCAATT TTGCGTTTGTCATCATCGGGGCAGAG ATGT CTCAGCCCCGATGATGA-AGA-GAAA TTATGCGTTTTTTTC fruA 2401459 - 2399768 - | fructose-specific PTS system IIBC component UTI89_C2441 2399528 - 2399950 + | hypothetical protein TERM 3281 2401189 - 2401168 - GT 78 -10.9 -3.14344 | gap 1, opp_overlap 2401155 GACCGCTGGCAGCAA CCGGT-GCTG TCG CAGCGACCGG CGCAGTGTAAGGTTT fruK 2402414 - 2401476 - | 1-phosphofructokinase UTI89_C2444 2403544 - 2402414 - | bifunctional fructose-specific PTS IIA/HPr protein TERM 3282 2403559 - 2403579 + H 77 -10.5 -3.48276 | TAGTTCTCCTCTCTT GCTGAATTG AAA CGATTCAGC TTCTATGAGAAAAAA TERM 3283 2403631 - 2403595 - H 76 -2.9 -5.31275 | opp_overlap 2403597, overlap 2403596 2403597 TTCTATGAGAAAAAA GCGCCAACCTGGCTT ATGGTTA AAGACAAGATCGCGC TGAAACGTTTCAAGA UTI89_C2445 2403709 - 2403840 + | hypothetical protein yeiO 2403911 - 2405092 + | YeiO MFS transporter (sugar efflux transporter B) UTI89_C2447 2405277 - 2405089 - | hypothetical protein TERM 3284 2405322 - 2405303 - gH 74 -10 -3.27525 | gap 1, overlap 2405298 2405317 GGGCTGGAAATTGAA GGGGCAGTG CAA CAC-GCCCC GCAACCCGGACGGCA yeiP 2405243 - 2406070 + | elongation factor P TERM 3285 2406110 - 2406091 - fH 79 -7.8 -4.42386 | opp_overlap 2406091 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA TERM 3286 2406091 - 2406110 + FH 100 -10 -5.46129 | opp_overlap 2406091 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA yeiQ 2406284 - 2407759 + | oxidoreductase YeiQ TERM 3287 2407770 - 2407808 + F 74 -8.1 -4.03183 | opp_overlap 2407777 TTTAACGATTTCTGC GGTTAAAGCGGATGAAG CTCGC CTTCGTCCGCTCTCCCC TTCTCTTTTCTGCCT TERM 3288 2407801 - 2407777 - f 77 -10 -3.53091 | opp_overlap 2407770 ATTTCTGCGGTTAAA GCGGATGAAG CTCGC CTTCGTCCGC TCTCCCCTTCTCTTT yeiR 2407877 - 2408863 + | hypothetical protein TERM 3289 2408923 - 2408913 - g 73 -4 -4.81734 | opp_overlap 2408913 AAATATGATTAAAAA TTTG CCG CAAA TAGTGTTGTTGAATA TERM 3290 2409163 - 2409153 - g 75 -4.6 -4.86731 | CTGGCTGAAAGAAAA CGCC CCT GGCA GACGACGTATCGTGA UTI89_C2451 2408866 - 2409615 + | hypothetical protein TERM 3291 2409964 - 2409975 + F 86 -2.2 -5.61596 | AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT TERM 3292 2410503 - 2410516 + G 70 -6.7 -4.08557 | overlap 2410502 GTTTGTCCATGCTTC CACCA GCAG TGGTG TTATTATTTCCAGCA spr 2410027 - 2410593 + | putative outer membrane lipoprotein TERM 3293 2410643 - 2410660 + F 100 -11.3 -5.85244 | opp_overlap 2410643 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3294 2410660 - 2410643 - f 91 -11.3 -3.77219 | opp_overlap 2410643 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3295 2411266 - 2411247 - g 70 -4.9 -4.56597 | overlap 2411249 CCCTTTGCTGAAAAA TAGCGGC GTGTTT GCCGCTC TGAATCTCAACCTGA TERM 3296 2411264 - 2411249 - g 72 -7.5 -3.90048 | overlap 2411247 CTTTGCTGAAAAATA GCGGC GTGTTT GCCGC TCTGAATCTCAACCT TERM 3297 2411478 - 2411490 + G 73 -4.1 -4.7497 | CTGGACATGGAACGA TGTGT GGT ACGCA TTTTTACTGGGTGGC TERM 3298 2411608 - 2411639 + G 73 -9.6 -3.57144 | gap 1, overlap 2411608 CGCGAACAATTTTAC G-TGGTGTATCAACC GGT GGTTGATACACAAGC TTTGCGGGTAACGGG TERM 3299 2412056 - 2412074 + G 71 -9.6 -3.50447 | overlap 2412044 2412068 GCGCGCTTATCTATC TTGAGCGT TTT ACGCTCGA TTATCTGAAAATTGA rtn 2410774 - 2412330 + | hypothetical protein TERM 3300 2412495 - 2412522 + G 77 -8.5 -4.06055 | gap 1 GGAAAGCTATGCCTT TGCCGTACTGGG CGAAC CCCGGTACG-CA TTTAATTTCAACCAT TERM 3301 2413307 - 2413288 - g 79 -2.2 -5.25803 | gap 1, overlap 2413290 2413292 AATTTCGATAAAAAA TACATCATC AAA GATGA-GCA AAAGAACGAATCAGC yejA 2412406 - 2414226 + | hypothetical protein TERM 3302 2415072 - 2415117 + G 80 -5.3 -5.02074 | overlap 2415085 TGTGTTCCGCAACGC CATGCTGCTGGTGATTGCCGG TTTT CCGGCGACGTTTATCAGCATG TTTTTTACCGGCTCG UTI89_C2455 2414227 - 2415321 + | oligopeptide transport system permease protein OppB TERM 3303 2416186 - 2416206 + G 70 -11.2 -2.73875 | overlap 2416183 TCGGTCTGCCGCTCG GTTCACCG TCACT CGGTGAAC TGCTGTTACAAGGGA yejE 2415321 - 2416346 + | putative transport system permease protein yejF 2416348 - 2417937 + | ABC transporter ATP-binding protein yejG 2418285 - 2417941 - | hypothetical protein TERM 3304 2418603 - 2418586 - R 76 -7.7 -4.26202 | opp_overlap 2418586 ACATGCATCAACAAA GGAAGCC TTTT AGCTTCC TCGTTGTGCAATAGA bcr 2419809 - 2418619 - | bicyclomycin/multidrug efflux system TERM 3305 2419301 - 2419287 - G 80 -11.4 -3.41878 | TTGCCGAAGCCAGAA TCGCCG CCA CGGCGA GGATCCAGAAGATGT rsuA 2420532 - 2419837 - | 16S rRNA pseudouridylate synthase A yejH 2420682 - 2422442 + | hypothetical protein UTI89_C2463 2422983 - 2422552 - | hypothetical protein rplY 2422567 - 2422851 + | 50S ribosomal protein L25 TERM 3306 2422867 - 2422896 + gT 100 -15.9 -2.90219 | opp_overlap 2422874, overlap 2422874 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCG GCGGGGTTTTTTG TCTCTGCAAATTATG TERM 3307 2422889 - 2422874 - GT 100 -11.8 -5.06103 | opp_overlap 2422874 2422867 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA TERM 3308 2422874 - 2422889 + gT 100 -11.8 -5.4251 | opp_overlap 2422874, overlap 2422867 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA TERM 3309 2423027 - 2422986 - TR 71 -3.8 -4.74285 | gap 2, opp_overlap 2423009, overlap 2422987 ATTCAGAACACAAAA CCGATTAATTGC--CGCCAG ACGT CCGGCGCTGCAATTGATCGC GCAAGTTCGGCGGCG yejK 2423997 - 2422990 - | nucleoid-associated protein NdpA TERM 3310 2424139 - 2424128 - H 100 -5.8 -6.04378 | opp_overlap 2424128 2424138 AAAGCAGAAAAAAAA CCGT TGCT ACGG TAATATGTTGCCCTT yejL 2424179 - 2424406 + | hypothetical protein TERM 3311 2424936 - 2424902 - g 70 -7.1 -4.09685 | opp_overlap 2424934 2424935 GTGGAGCTGGCAAAA GCTGCGCAGC-CTGACG CGT CGTCGGCGCTTCGC-GC GCCCGCTGGCCGCAT TERM 3312 2425263 - 2425276 + G 76 -8.1 -4.25104 | opp_overlap 2425256 2425261, overlap 2425275 TTCGAGAAGCAGATG CCTGC GCTG GCAGG TTTTGCTGAGCAAAA yejM 2424426 - 2426186 + | putative sulfatase TERM 3313 2426370 - 2426353 - T 79 -7 -4.70613 | opp_overlap 2426345 2426353 AAAATCCCAAGAAAA CCAACC TATTGC GGTTGG TTTTTTTATATCTGC TERM 3314 2426353 - 2426370 + T 100 -7 -5.76633 | opp_overlap 2426353, overlap 2426345 AAAATCCCAAGAAAA CCAACC TATTGC GGTTGG TTTTTTTATATCTGC TERM 3315 2426397 - 2426428 + T 71 -4.4 -4.73682 | opp_overlap 2426401 CTGCATTTAATTCGA TAAACAGACAGCGA CACA TCACGGCCTGTTTA TTTTCTGTTATCAGA UTI89_C2468 2426594 - 2426439 - | hypothetical protein yejO 2427236 - 2427033 - | outer membrane protein YejO UTI89_C2470 2427524 - 2427267 - | hypothetical protein narP 2427526 - 2428203 + | transcriptional regulator NarP TERM 3316 2428206 - 2428234 + T 100 -8.8 -5.35815 | opp_overlap 2428207 2428209, overlap 2428207 CGGGGCACAATAAAA ATAGCCCGATGG CATCA CCATCGGGCCAC TTTTTATTTACTCTC TERM 3317 2428233 - 2428207 - T 100 -15.2 -5.18726 | opp_overlap 2428207 2428206, overlap 2428209 GGGGCACAATAAAAA TAGCCCGATGGC ATC ACCATCGGGCCA CTTTTTATTTACTCT TERM 3318 2428207 - 2428233 + T 100 -12.3 -3.79862 | opp_overlap 2428207 2428209, overlap 2428206 GGGGCACAATAAAAA TAGCCCGATGG CATCA CCATCGGGCCA CTTTTTATTTACTCT TERM 3319 2428231 - 2428209 - T 100 -15.6 -4.22377 | opp_overlap 2428207 2428206, overlap 2428207 GGCACAATAAAAATA GCCCGATGGC ATC ACCATCGGGC CACTTTTTATTTACT ccmH 2429290 - 2428238 - | cytochrome c-type biogenesis protein CcmH precursor TERM 3320 2428516 - 2428526 + g 81 -6.8 -4.62069 | CAGCGTATCCCAGTG CAGC ATC GCTG TTTTTCGGATCGAGG TERM 3321 2429297 - 2429285 - G 77 -3.3 -5.07486 | CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT ccmG 2429844 - 2429287 - | disulfide oxidoreductase ccmF 2431784 - 2429841 - | cytochrome c-type biogenesis protein CcmF TERM 3322 2430302 - 2430280 - G 72 -7 -4.2558 | TAGTTCTGACTAAAA GCAATGCCAA CAA TTGTCACTGC CAGCCCCAGGTGAGC TERM 3323 2431696 - 2431665 - G 78 -9.4 -3.9693 | gap 1 CAGCCAGGCAAACAA GCGGGAAGACGC-CA TCA TGCGCGCGTCCCCGC GCGCCACGCCCCATA ccmE 2432260 - 2431781 - | cytochrome c-type biogenesis protein CcmE ccmD 2432466 - 2432257 - | heme exporter protein C TERM 3324 2432424 - 2432413 - G 95 -7.2 -5.42131 | CAACCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2433224 - 2432463 - | heme exporter protein C TERM 3325 2432620 - 2432585 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2432585 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2433904 - 2433242 - | heme exporter protein B TERM 3326 2433373 - 2433357 - G 81 -10.8 -3.57797 | GGCAAATGCATAGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG ccmA 2434524 - 2433901 - | cytochrome c biogenesis protein CcmA napC 2435139 - 2434537 - | cytochrome c-type protein NapC TERM 3327 2434963 - 2434989 + g 81 -6.6 -4.66163 | ACGCATTTCGTGGCA GCTAATGCAGAA CTC TTCGGTATTGGC TTTTTCCATCCCGGT napB 2435598 - 2435149 - | diheme cytochrome c550 TERM 3328 2435263 - 2435240 - G 70 -5.9 -4.18674 | overlap 2435241 TGCAGACAGAAATAA CGACGCGGA GCCACT TCCGCGCCC ACTTTGCCGTCGCTG napH 2436458 - 2435595 - | quinol dehydrogenase membrane component TERM 3329 2435931 - 2435907 - G 86 -3.5 -5.35815 | overlap 2435921 TAGATCAAATAAAAA CAGCGCG AGAATAAGCAG CGCGCCG CTGCCGAAGCCCATT TERM 3330 2435935 - 2435921 - G 88 -11.4 -3.80174 | overlap 2435907 ACAGCGCGAGAATAA GCAGCG CGC CGCTGC CGAAGCCCATTACCA napG 2437140 - 2436445 - | quinol dehydrogenase periplasmic component TERM 3331 2437002 - 2437033 + g 81 -12.4 -3.21276 | gap 1, overlap 2437006 TGGCTCCGGGCGGGC GCAA-CCGCACGC CAGATGC GCGTGCGGTTTGC TGTTGTAACCCCAGC TERM 3332 2437006 - 2437028 + g 90 -12 -3.97088 | overlap 2437002 TCCGGGCGGGCGCAA CCGCACGC CAGATGC GCGTGCGG TTTGCTGTTGTAACC napA 2439633 - 2437147 - | nitrate reductase TERM 3333 2438594 - 2438612 + g 79 -3.7 -5.02476 | overlap 2438589 2438595 AACTGGTCTTTCGGC ACGCCGG TCATT TCGGCGG TTTTTTCCAGCGTAT napD 2439893 - 2439630 - | assembly protein for periplasmic nitrate reductase napF 2440377 - 2439883 - | ferredoxin-type protein TERM 3334 2440520 - 2440510 - gR 70 -6.8 -4.08767 | CCGATCGGGGTAAAA CCTG TAG CAGG ATCAAAAGAGTGGCG UTI89_C2488 2440698 - 2440570 - | hypothetical protein TERM 3335 2440609 - 2440627 + Gg 73 -3.9 -4.80453 | gap 1 ATAGCGATTAATTCG CCAG-AGA TATT TCTGCTGG TTTGTTTTCTCATCA UTI89_C2487 2440477 - 2440650 + | hypothetical protein eco 2440764 - 2441273 + | ecotin precursor TERM 3336 2441383 - 2441419 + T 93 -15.2 -2.71011 | opp_overlap 2441385 2441404 CGCGTCTTATCAGCA TACGCCACATCCGGCA AACCA TGCCGGATGTGGCACA TCATTACAACGCAAT TERM 3337 2441417 - 2441385 - T 100 -20 -2.82516 | opp_overlap 2441383, overlap 2441404 CGTCTTATCAGCATA CGCCACATCCGGCA AACCA TGCCGGATGTGGCA CATCATTACAACGCA mqo 2443069 - 2441423 - | malate:quinone oxidoreductase TERM 3338 2442477 - 2442487 + g 72 -6.8 -4.19624 | CCAATTTCCGTACGC GTGG CTG CCAC TTTCTGTTGCGGATC TERM 3339 2442701 - 2442671 - G 78 -9.6 -3.92641 | overlap 2442672 2442675 AACGGTATTGATAAA TGAACGCGGTGTAC GCA GCACGCCGCGCTCG ACCTGGTGCGCCCAG TERM 3340 2442700 - 2442672 - G 82 -13.1 -2.95102 | overlap 2442671 2442675 ACGGTATTGATAAAT GAACGCGGTGTAC GCA GCACGCCGCGCTC GACCTGGTGCGCCCA TERM 3341 2442697 - 2442675 - G 81 -11.2 -3.61988 | overlap 2442672 2442671 GTATTGATAAATGAA CGCGGTGTAC GCA GCACGCCGCG CTCGACCTGGTGCGC TERM 3342 2443276 - 2443246 - R 86 -12.6 -3.22475 | opp_overlap 2443238 2443236, overlap 2443244 2443247 GGTATTTTTAGAATA TTGACCTGGCGG CAGCAGT CCGCCAGGTCAG CGTCGTAATATTATG TERM 3343 2443275 - 2443247 - R 100 -16.1 -2.53271 | opp_overlap 2443238 2443236, overlap 2443246 2443244 GTATTTTTAGAATAT TGACCTGGCGG CAGCAGT CCGCCAGGTCA GCGTCGTAATATTAT yojI 2444930 - 2443287 - | multidrug transporter membrane component/ATP-binding component TERM 3344 2443552 - 2443562 + g 79 -2.4 -5.28826 | opp_overlap 2443551 2443553, overlap 2443543 GCCAGCGCCAGCAAC AGCG CCA CGCG TTTTTTCTGCCCTTT TERM 3345 2444452 - 2444440 - G 72 -5.5 -4.4891 | overlap 2444441 2444444 GCCACCAGTATAAAA CCACC CCA GATGG TGACTGCCATCCAGA alkB 2445656 - 2445006 - | AlkB repair system protein for alkylated DNA and RNA ada 2446720 - 2445656 - | Ada transcriptional dual regulator / O-6-methylguanine-DNA methyltransferase UTI89_C2494 2446454 - 2446672 + | hypothetical protein apbE 2447849 - 2446794 - | thiamine biosynthesis lipoprotein ApbE TERM 3346 2447946 - 2447919 - gR 83 -12.8 -3.10622 | opp_overlap 2447926, overlap 2447926 TACGCTGAAAACAAT GAAAAAAGGGCC CGCA GGCCCTTTGTTC GATATCAATCGAGAT TERM 3347 2447939 - 2447926 - gR 100 -9.5 -5.43514 | opp_overlap 2447926, overlap 2447919 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA TERM 3348 2447926 - 2447939 + Gr 84 -9.5 -4.23213 | opp_overlap 2447926 2447919 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA ompC 2449052 - 2447961 - | outer membrane porin protein C UTI89_C2496 2447901 - 2448959 + | hypothetical protein TERM 3349 2449453 - 2449471 + FH 100 -14.6 -5.81032 | TTACCCCTATTTCAA CCGGATGC CTC GCATCCGG TTTTTTTTACCCTTC TERM 3350 2451158 - 2451132 - gfH 71 -5 -4.56978 | opp_overlap 2451140 CTGGTAAACAAGAAA CTCAAGCAGGCG CAG CGTCTGTATGAG AAAAACCAGCAGGGG TERM 3351 2451574 - 2451559 - gfH 71 -3.2 -4.81083 | CGCAATTAGGAAAAA TCACCC TTGA GGTTGA TCAGGATGAGTCCTC yojN 2449791 - 2452463 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC rcsB 2452435 - 2453130 + | transcriptional regulator RcsB TERM 3352 2453140 - 2453173 + T 100 -14.7 -3.55622 | opp_overlap 2453150, overlap 2453141 2453153 GACTAATCACCTGTA GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA TTTGCACGGATTGCC TERM 3353 2453141 - 2453172 + T 100 -18.2 -2.73159 | opp_overlap 2453150, overlap 2453140 2453153 ACTAATCACCTGTAG GCCAGATAAGACGC GTTA GTGTCTTATCTGGC ATTTGCACGGATTGC TERM 3354 2453254 - 2453287 + T 77 -9.5 -3.61178 | opp_overlap 2453254 2453251 2453264 2453266 2453267, overlap 2453255 2453266 2453267 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 3355 2453287 - 2453254 - T 81 -11.7 -3.00585 | opp_overlap 2453254 2453255 2453266 2453267, overlap 2453251 2453264 2453266 2453267 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 3356 2453255 - 2453286 + T 85 -13 -2.76492 | opp_overlap 2453254 2453251 2453264 2453266 2453267, overlap 2453254 2453266 2453267 ATTACATTAAAGTAG GCCAGATAAGACGC GTCA GCGTCGCATCTGGC ATTTGCACTGAATGC TERM 3357 2453322 - 2453264 - T 81 -11 -3.51137 | opp_overlap 2453255 2453254 2453266 2453267, overlap 2453254 2453251 2453266 2453267 AAGTAGGCCAGATAA GACGCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCAGATGCGGCGTAAACGCCTT ATCCGTCCTACGATT TERM 3358 2453320 - 2453266 - T 100 -13.6 -3.32698 | opp_overlap 2453255 2453254 2453266 2453267, overlap 2453254 2453251 2453264 2453267 GTAGGCCAGATAAGA CGCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCAGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 3359 2453266 - 2453320 + T 100 -17.2 -3.37796 | opp_overlap 2453254 2453251 2453266 2453264 2453267, overlap 2453255 2453254 2453267 GTAGGCCAGATAAGA CGCGTCAGCGTCGCATCTGGCATTTG CAC TGAATGCCAGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 3360 2453319 - 2453267 - T 100 -17.1 -2.59298 | opp_overlap 2453255 2453254 2453266 2453267, overlap 2453254 2453251 2453266 2453264 TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCAGATGCGGCGTAAACGC CTTATCCGTCCTACG TERM 3361 2453267 - 2453319 + T 100 -20.7 -2.62463 | opp_overlap 2453254 2453251 2453267 2453266 2453264, overlap 2453255 2453254 2453266 TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATTTG CAC TGAATGCCAGATGCGGCGTAAACGC CTTATCCGTCCTACG rcsC 2456179 - 2453330 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 3362 2455575 - 2455543 - G 70 -7 -4.0371 | gap 1, overlap 2455530 2455565 2455566 GATTCGCCAGATAAA CTGGCGTCAAGGCGT AAAA ATACCC-GACGCCAG GGCGCGGACCTTCGC TERM 3363 2455797 - 2455776 - G 75 -4.5 -4.8543 | gap 1, overlap 2455780 TAAGCCGCAGAAAAA TTATCGCGCC AGT AGCGC-ATAA ACCACGCCAATGACT TERM 3364 2457514 - 2457472 - g 86 -9 -4.41348 | overlap 2457476 CTGCCCGCAAAGAAA CCCAGCGCCGCATGGCGC AAGCAGA ACGCCTCGCCACACTGGG TGAGCTGATGGCTGG TERM 3365 2458008 - 2457998 - g 91 -5.4 -5.40072 | opp_overlap 2457998 CTCGCTGCAAAAAAA GATC TTC GATC CCTTTTTCACTACCA atoS 2456334 - 2458172 + | sensory histidine kinase AtoS atoC 2458169 - 2459554 + | acetoacetate metabolism regulatory protein AtoC TERM 3366 2459608 - 2459563 - f 100 -13.5 -4.21936 | gap 1, opp_overlap 2459563 2459579, overlap 2459564 TGTATAACGCCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCC-G CTCATTCTCCTTATG TERM 3367 2459563 - 2459609 + F 72 -10.2 -2.90904 | opp_overlap 2459563 2459564, overlap 2459579 TGTATAACGCCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCGC TCATTCTCCTTATGA TERM 3368 2459608 - 2459564 - f 87 -13.7 -3.1268 | opp_overlap 2459563 2459579, overlap 2459563 GTATAACGCCAAAAC TTGCTATGCAGAAATTTGCAC AGT GCGCAATTTTCTGCATAGCCG CTCATTCTCCTTATG atoD 2459750 - 2460412 + | acetyl-CoA:acetoacetyl-CoA transferase subunit alpha atoA 2460412 - 2461062 + | acetate CoA-transferase beta subunit TERM 3369 2461075 - 2461090 + G 75 -6.8 -4.3739 | TGATTGGTCGCATAT CGCGTT TTAT GACGCG TTTTGTCAGCCGATG TERM 3370 2461352 - 2461334 - g 82 -11.7 -3.53012 | opp_overlap 2461329 2461327 CGCCTCCGCCGCAAA GACGCCC GTACA GGGCGTC ATGCTGGTTACTTTC TERM 3371 2461563 - 2461551 - g 72 -10.5 -3.01712 | CTGTTGGCTGCAACA CCGGG CAA CCCGG TTGAGCATATCGCCG atoE 2461059 - 2462381 + | short-chain fatty acids transporter atoB 2462412 - 2463596 + | acetyl-CoA acetyltransferase TERM 3372 2463607 - 2463632 + T 95 -11.1 -4.65747 | opp_overlap 2463607 ATTAACATGTAAAAA CGCCCGATAGC GAAA GTCATCGGGCG TTTTCTTGAACATTG TERM 3373 2463632 - 2463607 - T 95 -11.1 -4.75308 | opp_overlap 2463607 ATTAACATGTAAAAA CGCCCGATAGC GAAA GTCATCGGGCG TTTTCTTGAACATTG yfaP 2464446 - 2463670 - | hypothetical protein TERM 3374 2463904 - 2463916 + g 82 -7.7 -4.57073 | CGTGACATCCATATC CAGTG CAC CACTG TTTTTCAGCACGGTG yfaQ 2466100 - 2464451 - | hypothetical protein TERM 3375 2464689 - 2464704 + g 95 -6 -5.40072 | overlap 2464690 TCATCTTGTAACACG CGCCGC CACT GCGGCA TTTTTTTCGCCAGCC TERM 3376 2464690 - 2464703 + g 76 -9.5 -3.83561 | overlap 2464689 CATCTTGTAACACGC GCCGC CACT GCGGC ATTTTTTTCGCCAGC TERM 3377 2465397 - 2465371 - G 70 -7.3 -4.11216 | gap 1 TCGGCACTGGCAAAA CCCGATTAAGCG CCGT CGCATAA-CGGG TCAGTACCGTTTTGC UTI89_C2509 2470630 - 2466101 - | hypothetical protein TERM 3378 2467209 - 2467230 + g 72 -10.9 -3.08639 | GGCATGTTGTCCGCC TGCTCGGCA TAAC TGTCGAGCA TATGTTGCCAGTATT TERM 3379 2469724 - 2469707 - G 71 -2.7 -4.82901 | GCTTTCGTAGAAAAA GTTCTCG GAGA CAAAAAC GCCGCCTTCAGCATC TERM 3380 2469737 - 2469724 - G 71 -2.3 -4.96848 | overlap 2469725 TCTCGGAGACAAAAA CGCCG CCTT CAGCA TCCTTACCCAGAATA TERM 3381 2470059 - 2470075 + g 70 -6.5 -4.16921 | GGCGAAATGAAATTG CTGGATG CGC CTTCCAG TTTTACCCCTTGTTG TERM 3382 2470565 - 2470544 - G 72 -5.1 -4.4831 | gap 1, opp_overlap 2470544 AGCGAGCAAAAAGAA TGTTCC-CCC GGC GGGCGGCACA TAGTTACTGGAAGGA yfaT 2471289 - 2470639 - | hypothetical protein TERM 3383 2470856 - 2470870 + gr 91 -11.4 -4.08706 | opp_overlap 2470849 AAAAAAATCATATCG CCAGGC AGT GCCTGG TTTATGTCCTGGCCA yfaA 2472947 - 2471259 - | hypothetical protein TERM 3384 2472172 - 2472187 + gr 79 -4.6 -5.02074 | overlap 2472177 GCGCTGACCACGATG CGCTGG CGTA CTGGCG TTTTTTCGGCAGTAC TERM 3385 2472177 - 2472204 + gr 79 -11.3 -3.01712 | overlap 2472172 GACCACGATGCGCTG GCGTACTGGCG TTTTTT CGGCAGTACGC TCTTCCAGGCCAAAG TERM 3386 2472218 - 2472233 + gr 81 -4.6 -5.03314 | opp_overlap 2472219, overlap 2472219 GCTCTTCCAGGCCAA AGCTGG CTTG CCAGCG TTTTTTACCACTCAA TERM 3387 2472693 - 2472683 - GR 78 -5.4 -4.73682 | TCTGATAATAGAAAA CGAA ATC TTCG CTCAGAACATCGTGG TERM 3388 2472800 - 2472826 + gr 79 -2.3 -5.24129 | gap 1, overlap 2472801 GATCGATTTGCAGAT TGTTGTGCACCA CCAG TGGCG-ACAACG TTTTTTCTGGCCCAC TERM 3389 2473044 - 2473023 - R 87 -8.7 -4.55023 | opp_overlap 2473023, overlap 2473018 CCTAATACGACAAAA GCCCAGACT TTAC AGCCTGGAC TTTTCAATTCAAAAA TERM 3390 2473061 - 2473074 + r 74 -8.1 -4.13767 | opp_overlap 2473061 TTTCAATTCAAAAAA GGGAG ATGG CTCCC TTTTGGCATGAAGCG TERM 3391 2473074 - 2473061 - R 87 -8.1 -5.15969 | opp_overlap 2473061 TTTCAATTCAAAAAA GGGAG ATGG CTCCC TTTTGGCATGAAGCG gyrA 2475723 - 2473096 - | DNA gyrase subunit A TERM 3392 2474851 - 2474871 + g 82 -2.4 -5.45802 | overlap 2474843 AGACTCGTCACGCAG CGCGCTGA TGCCT TCCACGCG TTTTTCTTTTACCAG ubiG 2475870 - 2476592 + | 3-demethylubiquinone-9 3-methyltransferase TERM 3393 2476648 - 2476692 + T 100 -16.7 -3.53811 | opp_overlap 2476689, overlap 2476620 2476637 ATGCGACGCTTGCCG CGTCTTATCAGGCCTAC AAATGCTCCCC GTAGGCCTGATAAGGCG TTTACGCCGCATCCG yfaL 2480496 - 2476732 - | adhesin TERM 3394 2476772 - 2476759 - G 73 -3.7 -4.87665 | overlap 2476760 2476761 TGTCATCGACAAAAA CCCTG CCGT CTGGG CAAAATCATCACTCC TERM 3395 2479370 - 2479354 - G 74 -8.7 -3.86916 | overlap 2479349 GACCATCAGACCAAA GCAATCC TGC GGATCGC TCTGACAGTGCGTGT TERM 3396 2479548 - 2479571 + g 72 -6 -4.36914 | overlap 2479541 2479549 CAATCGCGCCATCGT TGCTGGTATT GCCT ATTACCAGCG TTTTATCGGCGGCAA TERM 3397 2480194 - 2480207 + g 76 -8.1 -4.28487 | opp_overlap 2480194, overlap 2480189 CGAGTTATCAGCAAA CAGGG TCAT CCCTG TTTCATTTTGTGGTG TERM 3398 2482147 - 2482134 - g 77 -6.7 -4.56597 | GCTGGTGTTGAAAAA CAACC GTGG GGTTG AAGGCAACCGCGTGC nrdA 2481172 - 2483457 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3399 2483492 - 2483507 + F 74 -6.8 -4.3898 | gap 1, opp_overlap 2483470 GCGTGAACGCCTTAT CCG-GCC TAC GGCTCGG TTTTGTAGGCCTGAT nrdB 2483604 - 2484734 + | ribonucleotide-diphosphate reductase subunit beta yfaE 2484734 - 2484988 + | 2Fe-2S ferredoxin YfaE inaA 2485692 - 2485042 - | hypothetical protein TERM 3400 2485859 - 2485888 + r 77 -11.5 -2.76833 | opp_overlap 2485855, overlap 2485858 2485861 TTTAATGAAGAGTGG TATCGGATAGCAC ATAA GTGCCATCCGGTA GTTAATTTACTCTTT TERM 3401 2485861 - 2485886 + r 70 -9.7 -2.91429 | opp_overlap 2485855, overlap 2485859 2485858 TAATGAAGAGTGGTA TCGGATAGCAC ATAA GTGCCATCCGG TAGTTAATTTACTCT glpQ 2486971 - 2485895 - | glycerophosphodiester phosphodiesterase glpT 2488334 - 2486976 - | sn-glycerol-3-phosphate transporter TERM 3402 2487181 - 2487197 + g 79 -3.5 -5.08824 | opp_overlap 2487165 AGCCCGGTAAAACCC GCTGCCG TAC CTGCCGC TTTTTTCGGTGCCAG TERM 3403 2487613 - 2487632 + g 76 -4.2 -4.94972 | gap 1 ATGAAGATCTGCTTC GCGG-TCAG CTC CTGTTCCGC TTTTTCGTTATAGTC TERM 3404 2488070 - 2488055 - G 70 -6 -4.25104 | CTGCGGGCAGGAAAA CGCGCG GATT CGAGCG ATCCGATACCGAACC TERM 3405 2489530 - 2489555 + GH 71 -10.4 -2.71144 | opp_overlap 2489520, overlap 2489500 GAAAACGCGCATTTT GCGGGCCTAC TCTGGC GTACGCCCGC TGGTTGCCAGCGATG glpA 2488607 - 2490235 + | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 3406 2490309 - 2490294 - gf 72 -4.6 -4.66833 | CTGCAACTGCAAAAA CACGGC CTGC GCTGTG CCATTGTCACTCGTG TERM 3407 2491247 - 2491237 - gf 74 -8.2 -3.86897 | TTGATGTGCTACAAA CCGC TAC GCGG GGTGAATGGTATAAG glpB 2490153 - 2491484 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 2491481 - 2492671 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 3408 2492684 - 2492711 + F 100 -14.2 -4.65895 | TAAACTCCTTTCTGA TGCCCGGTAAGC ATGT GGTTACCGGGCA TTTTTGCGTACACGA UTI89_C2524 2492696 - 2492821 + | hypothetical protein TERM 3409 2493005 - 2492966 - g 71 -9.4 -3.4376 | gap 1, opp_overlap 2493002 ATACATTTACCAGAA CCACTGCGCAAGCTTTGCA ACC TGCAAACCTTACGCC-TGG AACCCACCAGTTTTA TERM 3410 2493002 - 2493015 + G 70 -3.8 -4.63218 | opp_overlap 2492966 CTGCAAACCTTACGC CTGG AACCCA CCAG TTTTATTGAAAAAAG yfaD 2492864 - 2493823 + | hypothetical protein UTI89_C2526 2493836 - 2494021 + | hypothetical protein yfaU 2494865 - 2494062 - | putative aldolase yfaV 2496211 - 2494883 - | transport protein YfaV TERM 3411 2496014 - 2495998 - G 77 -3 -5.03227 | gap 1 ATACCACAAAGAAAA TGC-CTG CTCC CAGCGCA TAAGCTTCATTACTC yfaW 2497446 - 2496229 - | hypothetical protein TERM 3412 2497187 - 2497169 - G 78 -5.2 -4.77165 | TTTTCGACAATAAAA CAGCCCAT TTC ACCGGCTG TCGAAACGGCGAATC TERM 3413 2497203 - 2497213 + g 70 -4.6 -4.54821 | TCGAAACGGCGAATC CGGT CTG GCCG TTTTCTGCTTCGACT yfaX 2498231 - 2497449 - | transcriptional regulator YfaX TERM 3414 2498448 - 2498432 - R 71 -7.9 -3.72576 | TGCCGGTGCAGTAAA CCGGCAC AGA GTGGCGG AATCAGACAGATAAG UTI89_C2531 2499653 - 2498451 - | competence damage-inducible protein A TERM 3415 2499157 - 2499139 - G 87 -4.5 -5.27335 | gap 1, overlap 2499140 TGTGGTAAAGAAAAA CGCTCGCG CAGG CGCG-GCA GGATTTCGTGCTCGA TERM 3416 2499745 - 2499723 - R 71 -9 -3.38832 | overlap 2499736 2499737 TAGTAAGAAACTGAA TGGCGCGACA GAA CGCCGCGCCG GAAGGCGTCAGAAGC yfaZ 2500316 - 2499753 - | hypothetical protein yfaO 2500574 - 2500999 + | putative Nudix hydrolase YfaO TERM 3417 2501027 - 2501006 - T 86 -13.1 -2.93073 | opp_overlap 2500996, overlap 2500989 2501003 CTTCTTTAACAATGA TGACAGCCA TCAC TGGCTGTCA GATTGAAAATTTAGT ais 2501667 - 2501038 - | Ais protein TERM 3418 2501486 - 2501507 + g 73 -3.7 -4.79352 | gap 1, overlap 2501488 ACGACAACCGGGTGC TGCTGTGCCA GTC TGGC-CAGTG TTTTATTGTCGATGC TERM 3419 2502058 - 2502069 + G 72 -4.4 -4.62471 | TCCGAAGAATCAGGC GCTT GAAC AAGC TTTTTGCCAGTTGAC yfbE 2501948 - 2503087 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase UTI89_C2536 2503091 - 2504059 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 3420 2504281 - 2504293 + G 91 -7.7 -5.0432 | opp_overlap 2504281 CGCATTGCCCAACTA TCACC AGA GGTGA TTTTCTCTTTTTATT yfbG 2504059 - 2506041 + | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase yfbH 2506038 - 2506928 + | hypothetical protein TERM 3421 2507150 - 2507111 - g 75 -5.7 -4.59773 | opp_overlap 2507109 2507111 2507112 2507149, overlap 2507112 CGTTATTTCGAAAAA CCCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGGC TATTTGGCGCGAATA arnT 2506928 - 2508580 + | 4-amino-4-deoxy-L-arabinose transferase UTI89_C2540 2508577 - 2508912 + | hypothetical protein yfbJ 2508630 - 2509298 + | hypothetical protein pmrD 2509588 - 2509292 - | polymyxin B resistance protein PmrD menE 2511023 - 2509668 - | O-succinylbenzoic acid--CoA ligase menC 2511982 - 2511020 - | O-succinylbenzoate synthase TERM 3422 2511382 - 2511399 + g 70 -6.9 -4.09511 | opp_overlap 2511381 2511384 TTTCACGGGCAAACG CACGCGA ATCA TCGCGGG TTTTGCACGGCTCTT TERM 3423 2511896 - 2511906 + g 85 -8.2 -4.57837 | opp_overlap 2511896 2511895 2511893 CAGGCAAACATACAG CCCG TCG CGGG TTTTTAACCGCCTGT menB 2512839 - 2511982 - | naphthoate synthase TERM 3424 2512884 - 2512861 - gR 82 -10.4 -3.91897 | gap 1, opp_overlap 2512874 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATTACGCCAGCGGGA yfbB 2513612 - 2512854 - | acyl-CoA thioester hydrolase YfbB TERM 3425 2512889 - 2512914 + Gg 74 -9.7 -3.48276 | gap 1, overlap 2512874 CCAGACTTGCGATTA CGC-CAGCGGGA TTT TCCCGGTGCGCG TTATGTCCGGCGCGA UTI89_C2546 2512171 - 2513004 + | hypothetical protein TERM 3426 2513021 - 2513010 - GT 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 3427 2513078 - 2513097 + gT 70 -7.2 -3.99374 | gap 1, opp_overlap 2513045 2513044 2513066 2513065 AAGTCGCCTCCAGCA TGGCGGCAA GGG TTGC-GCCA TTATTGTTGCTGCGC TERM 3428 2513227 - 2513252 + gT 75 -8.9 -3.67843 | opp_overlap 2513212 CGCTGCGCCCATTGG CGATCGGAACG CTGA CGTTCCGCGCG TTGTTCAGCATTTTG TERM 3429 2513583 - 2513561 - GT 72 -7.7 -3.91164 | opp_overlap 2513565 2513566 2513569, overlap 2513559 2513566 AACCGTGCAAAAACA CCAACCAGG GTAAA CCTGGTTTG CCGTGTTTTGCCTGC TERM 3430 2513566 - 2513588 + gT 72 -7 -4.18494 | opp_overlap 2513561 2513559 2513566, overlap 2513565 2513569 TGCAAAAACACCAAC CAGGGTAAAC CTG GTTTGCCGTG TTTTGCCTGCGCGTG menD 2515468 - 2513609 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 3431 2514639 - 2514649 + gTr 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CAC GCTG TTTTTCACTTTCCCG menF 2516663 - 2515368 - | menaquinone-specific isochorismate synthase TERM 3432 2515901 - 2515919 + gr 80 -10.2 -3.85698 | CTACCGTTCCCGCCA GCGCTTCG GTA CGCAGCGC TTTGTCACGCCGCCG TERM 3433 2516104 - 2516116 + gr 70 -9.1 -3.18268 | overlap 2516103 2516107 ACAACTTTGTCGAGC TCGCC TTC GGCGA TGGTTTTCGTTGCCA elaB 2517047 - 2516742 - | hypothetical protein elaA 2517563 - 2517102 - | hypothetical protein elaC 2517628 - 2518545 + | ribonuclease Z TERM 3434 2518613 - 2518655 + T 72 -10.1 -2.85182 | gap 1, overlap 2518612 TTTGACATTTTTTCA TCTGTTTGCCGGATA-CG TTTGATGT CGATATCAGGCAAACAGA ATTATCATTTTTAGT yfbK 2520408 - 2518666 - | hypothetical protein TERM 3435 2520376 - 2520394 + g 82 -3.2 -5.28942 | CAAAATCAAACTACT TATAAGCA ACA TGATTATA TTTTTATTTCGCATA yfbL 2520540 - 2521517 + | putative aminopeptidase yfbM 2521620 - 2522123 + | hypothetical protein TERM 3436 2522146 - 2522166 + T 72 -8.2 -3.97368 | opp_overlap 2522147, overlap 2522147 AGGGCACCAAAAAAA ACCGCCGA ACATG TCGGCGGC TTTCTGACTTACAAA TERM 3437 2522147 - 2522165 + T 80 -11.7 -2.981 | opp_overlap 2522147, overlap 2522146 GGGCACCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA TERM 3438 2522165 - 2522147 - T 100 -11.7 -5.86061 | opp_overlap 2522146 2522147 GGGCACCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA nuoN 2523647 - 2522190 - | NADH dehydrogenase subunit N TERM 3439 2522829 - 2522817 - G 73 -9.1 -3.67296 | GATGATGGAGGCAAA GGCGA TAA TCGCC AGCACTACGCGAATC nuoM 2525183 - 2523654 - | NADH dehydrogenase subunit M TERM 3440 2524975 - 2524963 - G 75 -6.9 -4.41956 | ATAGAGATACCAAAA CGCGG GAT CCACG GCATGTCGAATTCAG TERM 3441 2525267 - 2525309 + r 79 -9.2 -3.88232 | gap 1, overlap 2525268 TCTCTTCGGACTGGG GGTAGTGTCGGATGCGCCG CGAAGA CGGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 3442 2525268 - 2525308 + r 82 -12.7 -2.92618 | gap 1, overlap 2525267 CTCTTCGGACTGGGG GTAGTGTCGGATGCGCCG CGAAGA CGGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2527188 - 2525347 - | NADH dehydrogenase subunit L TERM 3443 2525843 - 2525861 + g 72 -4.6 -4.68601 | overlap 2525841 CTGTGAGTTACCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT nuoK 2527487 - 2527185 - | NADH dehydrogenase subunit K nuoJ 2528038 - 2527484 - | NADH dehydrogenase subunit J nuoI 2528592 - 2528050 - | NADH dehydrogenase subunit I nuoH 2529584 - 2528607 - | NADH dehydrogenase subunit H TERM 3444 2528977 - 2528953 - G 77 -12.1 -2.71712 | overlap 2528952 TCCGGCTGGTCAAAC GGGTGACGGTG ACA CACCGCCACGC CCGCGATGGCAAAGG TERM 3445 2529427 - 2529407 - G 90 -14.7 -2.71364 | TCATGTCCGCAACCA GCTGGAGCG AAC CGCCCCAGC CAACACGGTTAGGTC nuoG 2532313 - 2529581 - | NADH dehydrogenase subunit G TERM 3446 2531544 - 2531555 + g 70 -5.8 -4.18018 | TAGTGGTTTACCGTA CCGT TGTA ACGG TTTTCGATACGACGC TERM 3447 2532199 - 2532180 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2533697 - 2532360 - | NADH dehydrogenase I subunit F TERM 3448 2532819 - 2532833 + g 88 -11.4 -3.84451 | GTCAGTCCCCGCGCC GCCTGG CTG CCAGGC TTTGAATTTCAGACC TERM 3449 2533620 - 2533634 + g 81 -10 -3.96148 | overlap 2533619 GCTGCGATATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2534194 - 2533694 - | NADH dehydrogenase subunit E nuoC 2535999 - 2534197 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 3450 2535719 - 2535708 - G 72 -5.8 -4.41548 | opp_overlap 2535717, overlap 2535716 2535717 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 3451 2535740 - 2535716 - G 74 -3.3 -4.89729 | opp_overlap 2535717, overlap 2535708 2535717 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT UTI89_C2567 2536755 - 2536093 - | NADH dehydrogenase subunit B nuoA 2537214 - 2536771 - | NADH dehydrogenase subunit A TERM 3452 2536916 - 2536902 - G 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC UTI89_C2569 2537630 - 2537361 - | hypothetical protein TERM 3453 2537767 - 2537802 + r 78 -6.2 -4.67556 | gap 1, opp_overlap 2537752 2537770 2537771, overlap 2537771 GCTTTTTACTAAAAA AAAGCCGCTGGGGTTTA AAA TAAACC-CAGCGGTTCG TTTTTACACTATTGT TERM 3454 2537799 - 2537770 - R 100 -10.1 -5.86061 | gap 1, opp_overlap 2537767 2537771, overlap 2537752 2537771 TTTTACTAAAAAAAA GCCGCTGGGGTTTA AAA TAAACC-CAGCGGT TCGTTTTTACACTAT TERM 3455 2537771 - 2537798 + r 100 -13.6 -3.81926 | gap 1, opp_overlap 2537770 2537771, overlap 2537767 TTTACTAAAAAAAAG CCGCTGGGGTTTA AAA TAAACC-CAGCGG TTCGTTTTTACACTA TERM 3456 2537798 - 2537771 - R 100 -13.6 -4.10552 | gap 1, opp_overlap 2537771 2537767, overlap 2537770 TTTACTAAAAAAAAG CCGCTGGGGTTTA AAA TAAACC-CAGCGG TTCGTTTTTACACTA lrhA 2538782 - 2537844 - | transcriptional regulator LrhA TERM 3457 2538065 - 2538091 + g 77 -12.2 -2.78679 | overlap 2538064 GACTCATCATCTCGA CCGGCCTTGCCG TCA CGCCAAGACCGG CTTTCACTGCCGCAC TERM 3458 2538532 - 2538506 - G 72 -11.1 -3.12482 | opp_overlap 2538513, overlap 2538510 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGGATTTTCC TERM 3459 2538552 - 2538535 - G 72 -6.3 -4.30576 | gap 1, overlap 2538537 GCCTCATCATTAAAA CG-CAGGA TTT TCCTGGCG TAACCAAGAAGTTGA UTI89_C2571 2539022 - 2539276 + | hypothetical protein TERM 3460 2539707 - 2539691 - f 74 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC UTI89_C2572 2539702 - 2540919 + | aminotransferase AlaT TERM 3461 2540929 - 2540955 + F 100 -13.8 -3.28791 | CTGTAATCTTAATTT CACTGCCGGA GATTGCA TCCGGCAGTG TTATCCCGCCACAAT TERM 3462 2541308 - 2541298 - g 77 -3.2 -5.09225 | opp_overlap 2541298 AGGCTATTGAAAAAA TCGC TCA GCAA AAACTGGTCGATATG TERM 3463 2541511 - 2541484 - g 70 -4.8 -4.56597 | gap 1, overlap 2541486 2541499 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG CCGCAGCCAGGAGAT TERM 3464 2541531 - 2541545 + G 72 -7.2 -4.1673 | AGCCAGGAGATGGAC TACTTC ATG GAAGTA TTTGTTCCCAGCTTC yfbR 2541003 - 2541602 + | hypothetical protein TERM 3465 2541610 - 2541657 + T 90 -12.8 -3.28712 | gap 1, opp_overlap 2541635 CGCTGTAAGCAGTCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA yfbS 2543493 - 2541661 - | putative transport protein TERM 3466 2543560 - 2543543 - R 100 -9.8 -5.24129 | TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG yfbT 2544230 - 2543580 - | putative phosphatase TERM 3467 2543856 - 2543875 + g 72 -6.4 -4.3739 | gap 1, opp_overlap 2543850, overlap 2543860 GGTTACAAACACCTC TGGCGCGGG AAG CCC-CGCTA TTTTATGACGCGCTC TERM 3468 2543860 - 2543873 + g 76 -9.5 -3.79419 | overlap 2543856 ACAAACACCTCTGGC GCGGG AAGC CCCGC TATTTTATGACGCGC UTI89_C2576 2544753 - 2544241 - | hypothetical protein TERM 3469 2544792 - 2544774 - R 100 -6 -5.76949 | opp_overlap 2544774 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 3470 2544774 - 2544792 + r 76 -6 -4.55689 | opp_overlap 2544774 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT yfbV 2545273 - 2544818 - | hypothetical protein UTI89_C2578 2545473 - 2545342 - | hypothetical protein UTI89_C2579 2545611 - 2546813 + | acetate kinase TERM 3471 2546817 - 2546844 + TF 100 -16.4 -4.36914 | gap 1, overlap 2546819 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 3472 2546819 - 2546841 + TF 100 -19.2 -2.8733 | overlap 2546817 GACTGCCTGATTTCA CACCGCCAGC TCA GCTGGCGGTG CTGTTTTGTAACCCG UTI89_C2580 2549086 - 2546816 - | hypothetical protein TERM 3473 2547395 - 2547379 - Gg 74 -2.9 -5.00616 | CGGCGGTGCAAAAAA CACCAAT ATT ACCGGCG TTATCGTTAACAAAC TERM 3474 2547859 - 2547874 + Gg 78 -9 -3.96148 | CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2546888 - 2549032 + | phosphate acetyltransferase TERM 3475 2549044 - 2549064 + gF 82 -12.6 -2.87132 | GTAATCTCGTCATCA TCCGCAGC TTTGC GCTGCGGA TATCTGAACCGGAAA TERM 3476 2549073 - 2549095 + gF 100 -15 -5.64304 | CTGCGGATATCTGAA CCGGAAATAG TCA CTATTTCCGG TTTTTTATTCTATTA yfcC 2549222 - 2550742 + | hypothetical protein TERM 3477 2550752 - 2550769 + T 100 -12.7 -5.32944 | opp_overlap 2550747 2550754 CACTAAAAATGTTAA GAGCCGC GATT GCGGCTC TTTTTTCATTCTGCC TERM 3478 2550767 - 2550754 - T 72 -9.5 -3.17553 | opp_overlap 2550752, overlap 2550747 CTAAAAATGTTAAGA GCCGC GATT GCGGC TCTTTTTTCATTCTG UTI89_C2583 2551317 - 2550775 - | putative regulator TERM 3479 2550863 - 2550881 + g 82 -9.6 -4.16016 | opp_overlap 2550862 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA yfcE 2551929 - 2551375 - | phosphodiesterase yfcF 2552626 - 2551982 - | hypothetical protein TERM 3480 2552318 - 2552333 + g 86 -9 -4.42386 | CCAGGCCTGAATCTG TCGTGC TCGC GCACGA TTTTCTAAATCAAGC TERM 3481 2552602 - 2552589 - G 79 -2.3 -5.27923 | TAAGGGGAGAAAAAA TGGGC ATCT GACCA AAGCGTGATAGCGGG yfcG 2552762 - 2553409 + | putative S-transferase folX 2553466 - 2553828 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 3482 2554306 - 2554266 - g 78 -9 -3.93583 | gap 1, overlap 2554251 GAATTTACCCATAAA CTCTGCGCCC-GCTGGGAA GAAA TTGCCTGCCGGGCACAAAG TGACAAAACGCGAGT yfcH 2553849 - 2554742 + | putative sugar nucleotide epimerase yfcI 2555680 - 2554790 - | hypothetical protein TERM 3483 2555018 - 2555000 - G 70 -5.9 -4.25056 | opp_overlap 2555013 TATCTCACCAATAAA TGCACGG AAACG CCGGGCA TCCCCCGTTTGTAAT TERM 3484 2555656 - 2555644 - G 71 -9.1 -3.51168 | overlap 2555642 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 3485 2555869 - 2555846 - R 71 -8.8 -3.45027 | overlap 2555844 ATTCCCCATGAAATA CTCCGGCAGC GTTA ACCACCGGAG AGGAAATTATTTCAG hisP 2556649 - 2555876 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2557373 - 2556657 - | histidine transport system membrane protein M TERM 3486 2556682 - 2556695 + g 72 -4.5 -4.64766 | opp_overlap 2556673, overlap 2556683 GAAGAAGGTTTCACA TGCTG CAAC CAGCG TTTTTCAGCTCTACG TERM 3487 2557304 - 2557286 - G 70 -5.2 -4.33182 | overlap 2557297 CTACCGACAAAATAA GCAGCCAC AGA GTGATTGC CACGCCAGTAAAGCG hisQ 2558056 - 2557370 - | histidine transport system permease protein hisQ hisJ 2558928 - 2558146 - | histidine-binding periplasmic protein of high-affinity histidine transport system TERM 3488 2558788 - 2558800 + g 93 -6.3 -5.27477 | opp_overlap 2558787 ATCGAAGCCAACCAG TTCAC CTT GTGAA TTTTTTGATTCAAAT argT 2559931 - 2559149 - | lysine-arginine-ornithine-binding periplasmic protein precursor TERM 3489 2559275 - 2559298 + g 100 -5.2 -5.56264 | ATCTTTACGCAGCCC TACACCGGTG CCGT CACCGAAGTA TTTTTTGTCTTTCAC TERM 3490 2560188 - 2560170 - R 100 -13.2 -4.07687 | overlap 2560181 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG ubiX 2560766 - 2560197 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3491 2560848 - 2560830 - R 81 -12.4 -2.53263 | GGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TGAGCGAAGGCATCA purF 2562378 - 2560861 - | amidophosphoribosyltransferase TERM 3492 2561280 - 2561293 + g 73 -3.7 -4.82901 | GGACGATAGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 3493 2562149 - 2562115 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TGGGGTAACGCACAT cvpA 2562903 - 2562415 - | colicin V production protein TERM 3494 2563031 - 2563006 - g 100 -9.8 -5.1356 | GCGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC TERM 3495 2563153 - 2563120 - g 73 -11.7 -2.78384 | opp_overlap 2563133, overlap 2563130 2563133 TTCTGCTCCAGCACA GGCCTGATAAGACGC GCTG GCGTCACATCAGGCA ACGGCTGTCGGATGC UTI89_C2598 2563005 - 2563175 + | hypothetical protein dedD 2564097 - 2563435 - | hypothetical protein folC 2565355 - 2564087 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3496 2564754 - 2564767 + g 70 -3.7 -4.65895 | GGCATCTCCGGCTCA CCGAC AATT GCCGG TTTTTCGCTGCGAAA TERM 3497 2565331 - 2565307 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 3498 2565414 - 2565392 - R 100 -17 -4.46656 | opp_overlap 2565392 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 3499 2565392 - 2565414 + r 100 -14.8 -3.45054 | opp_overlap 2565392 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2566339 - 2565425 - | acetyl-CoA carboxylase subunit beta TERM 3500 2566483 - 2566471 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC AGAGTTACTTTTTAT dedA 2567154 - 2566495 - | hypothetical protein TERM 3501 2567182 - 2567216 + r 76 -10.8 -3.03338 | overlap 2567171 CTTGTACTCGTCATC TATCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCATTAT truA 2568049 - 2567237 - | tRNA pseudouridine synthase A TERM 3502 2567798 - 2567829 + g 100 -13.6 -3.57144 | CGCATTTACGCCTAA CGTCCACGCAGCGT CTTT GCGCTGCGCGGTCG TTTCGAAATGCACCA usg 2569062 - 2568049 - | putative semialdehyde dehydrogenase TERM 3503 2568869 - 2568853 - G 88 -5.7 -5.24129 | GCCTGCGACAAAAAA CGCCAGC TGC GCCTGCG TCCAGTCGAATTCAG TERM 3504 2569115 - 2569088 - R 74 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATGTTA CAGCAGAGAGC ATGAAGAAGAGATTA pdxB 2570264 - 2569128 - | erythronate-4-phosphate dehydrogenase TERM 3505 2571219 - 2571255 + G 70 -6.6 -4.08945 | gap 1, opp_overlap 2571219 AACGGCGGGTTAAAG GGATTGAGCCGCGTGAT ATGC AAC-CGCTGCTTAATCC TTTTCCACCGATGAT div 2570363 - 2571358 + | flagella biosynthesis regulator yfcJ 2572533 - 2571355 - | hypothetical protein TERM 3506 2572480 - 2572464 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGCGA TGCGG AAGAGCGAAAAATTG TERM 3507 2572695 - 2572724 + r 100 -13.7 -3.72576 | opp_overlap 2572701, overlap 2572701 GATTGTCAATGATGT GAAAAAGGGAACC ATAG GGTTCCCTTATTC TTTAGTACCGGAGGC TERM 3508 2572718 - 2572701 - R 100 -11.3 -4.64598 | opp_overlap 2572695 2572701 CAATGATGTGAAAAA GGGAACC ATAG GGTTCCC TTATTCTTTAGTACC TERM 3509 2572701 - 2572718 + r 91 -11.3 -4.12603 | opp_overlap 2572701, overlap 2572695 CAATGATGTGAAAAA GGGAACC ATAG GGTTCCC TTATTCTTTAGTACC fabB 2574018 - 2572798 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 3510 2574082 - 2574067 - H 71 -9 -3.281 | overlap 2574065 TTCGAATGCACAATA GCGTAC ACTT GTACGC CGAACAAGTCCGATC mnmC 2574177 - 2576183 + | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 3511 2576261 - 2576219 - T 88 -12 -3.53811 | opp_overlap 2576211, overlap 2576258 CGGATGCGGCGTAAA CGCCTTATCCGACCTACGCG TTA CCTGTAGGCCTGATAAGACG CGATAAGCGTCGCAT yfcL 2576582 - 2576304 - | hypothetical protein yfcM 2577164 - 2576616 - | hypothetical protein yfcA 2577973 - 2577164 - | hypothetical protein mepA 2578797 - 2577973 - | penicillin-insensitive murein endopeptidase TERM 3512 2578703 - 2578718 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 3513 2578743 - 2578787 + g 80 -5.5 -4.95211 | GCCACGGCGTCGCTG CCAGGCTGGCGCTACTGGC AAGCAGA GCCAGCAGCGCAATCGCGG TTTTGTTCATTTTTT aroC 2579889 - 2578801 - | chorismate synthase TERM 3514 2578898 - 2578872 - G 70 -5.9 -4.2828 | gap 1 GGTGATCCATTAAAA CGATCGCCAGCA TCGC TTCTG-CGATCG GCACCGCGCGGATCC TERM 3515 2579260 - 2579292 + g 71 -2 -5.00616 | overlap 2579248 2579263 TACGCCACTGGCAAC GACGGTGACTTT CGCACCAAT AGAGTCGCCTTC TTTTTTCAGCGCGCG TERM 3516 2579443 - 2579457 + g 85 -2.8 -5.44119 | opp_overlap 2579443, overlap 2579445 AATCTCAATGCCAAA TTTCTC GGC GAGATA TTTTTTTGCAATCGC TERM 3517 2579445 - 2579455 + g 70 -5.4 -4.36089 | opp_overlap 2579443, overlap 2579443 TCTCAATGCCAAATT TCTC GGC GAGA TATTTTTTTGCAATC prmB 2581186 - 2579921 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase yfcN 2581019 - 2581570 + | hypothetical protein TERM 3518 2581880 - 2581849 - TR 100 -14.4 -3.54951 | opp_overlap 2581853 2581856, overlap 2581853 GACCGCATGACATAA CGGACAACGGGGCC AGAT GGCCCCGTTGTGTG GTGTATACGCTACAG TERM 3519 2581876 - 2581853 - TR 100 -18.2 -2.64051 | opp_overlap 2581853 2581856, overlap 2581849 GCATGACATAACGGA CAACGGGGCC AGAT GGCCCCGTTG TGTGGTGTATACGCT TERM 3520 2581853 - 2581876 + Tr 100 -18.2 -2.89177 | opp_overlap 2581853 2581849, overlap 2581856 GCATGACATAACGGA CAACGGGGCC AGAT GGCCCCGTTG TGTGGTGTATACGCT TERM 3521 2581856 - 2581873 + Tr 100 -14.1 -3.59109 | opp_overlap 2581853 2581849, overlap 2581853 TGACATAACGGACAA CGGGGCC AGAT GGCCCCG TTGTGTGGTGTATAC yfcO 2582747 - 2581890 - | putative fimbrial adhesin YfcO precursor TERM 3522 2582123 - 2582149 + g 74 -6.5 -4.44915 | CGTCACAGAGCTTGC CGCTTTCCATC AAGAA GGTGGGCAGCG TTTTCTCAATCGTTC yfcP 2583261 - 2582734 - | putative Yfc fimbriae subunit YfcP precursor TERM 3523 2582886 - 2582900 + g 91 -7.8 -5.08824 | TATTGTTAATCGGCA CCGGTG TTC CATCGG TTTTTTCCATGCCAA yfcQ 2583737 - 2583258 - | putative Yfc fimbriae subunit YfcQ precursor yfcR 2584237 - 2583734 - | putative Yfc fimbriae subunit YfcR precursor yfcS 2585006 - 2584254 - | putative periplasmic chaperone YfcS precursor yfcU 2587680 - 2585026 - | putative outer membrane usher YfcU precursor yfcV 2588297 - 2587548 - | putative Yfc fimbriae subunit YfcV precursor TERM 3524 2588019 - 2588031 + gr 72 -5.5 -4.47183 | GTTAGTGCCGGTGAA CGTGG TCT CCATG TTTGTTTCAGTGGTA TERM 3525 2588855 - 2588825 - R 82 -10.5 -3.93695 | gap 1, opp_overlap 2588826, overlap 2588826 TGTATGACGGAGAAA CTGCCCGGTGTACG CGCA CGTA-ACCGGGCAT TGATTGCTTAAATTG TERM 3526 2588826 - 2588854 + r 100 -14 -3.46482 | gap 1, opp_overlap 2588826 2588825 GTATGACGGAGAAAC TGCCCGGTGTACG CGCA CGTA-ACCGGGCA TTGATTGCTTAAATT TERM 3527 2588854 - 2588826 - R 87 -14 -2.95896 | gap 1, opp_overlap 2588826, overlap 2588825 GTATGACGGAGAAAC TGCCCGGTGTACG CGCA CGTA-ACCGGGCA TTGATTGCTTAAATT UTI89_C2624 2589348 - 2588863 - | phosphohistidine phosphatase fadJ 2591695 - 2589551 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3528 2589898 - 2589910 + g 88 -2.6 -5.46698 | TGAGCGGGTAAATGG CGGG ATCGA CCTG TTTTTTGCTTTTACG fadI 2593005 - 2591695 - | 3-ketoacyl-CoA thiolase TERM 3529 2593168 - 2593142 - R 100 -20.2 -5.26907 | opp_overlap 2593142 GAAGAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG TATGTACCCGAGAGG TERM 3530 2593142 - 2593168 + r 100 -18 -2.87132 | opp_overlap 2593142 GAAGAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG TATGTACCCGAGAGG yfcZ 2593494 - 2593186 - | hypothetical protein UTI89_C2628 2593806 - 2593555 - | hypothetical protein fadL 2593836 - 2595182 + | long-chain fatty acid outer membrane transporter TERM 3531 2595228 - 2595209 - T 100 -7.9 -5.64873 | opp_overlap 2595209 CTTAATAAGAAAAAA GGTGAGT TTTGCG ACTCACC TTTTTTGTTTCTTAT TERM 3532 2595209 - 2595228 + T 100 -8.6 -5.82036 | opp_overlap 2595209 CTTAATAAGAAAAAA GGTGAGTT TTGC GACTCACC TTTTTTGTTTCTTAT vacJ 2595995 - 2595240 - | VacJ lipoprotein precursor UTI89_C2631 2596191 - 2596021 - | hypothetical protein TERM 3533 2596689 - 2596670 - g 70 -4.2 -4.65895 | opp_overlap 2596670 CCCGTCATGCAAAAA CCGACAAT GAGC AACGTCGG CTTACTTATGCGGTT yfdC 2596289 - 2597221 + | putative transport TERM 3534 2597229 - 2597212 - f 74 -3.3 -5.1286 | GAAAAATGATAAAAA CCCGGCA TAAA TGGCGAG GGTTTAAGCAATCGA TERM 3535 2597519 - 2597497 - g 95 -10 -4.60487 | CATGACGGGTAAAAA GTGGATAAAA TAA TTTTACCCAC CGGATTTTTACCCAT intC 2597497 - 2598690 + | prophage integrase TERM 3536 2598842 - 2598861 + T 100 -9.2 -5.3236 | ATTACCGCGGTTAAT GCCCGTCG CTTC CAACGGGC TTTTTTGTAAATTAT UTI89_C2635 2599265 - 2598930 - | hypothetical protein TERM 3537 2599797 - 2599810 + r 74 -3.1 -5.04385 | TTTTATATTTAATTT CGTTG ACGT CAATG TTTTTTGCCAATGTA sia 2602819 - 2599874 - | endo-alpha-sialidase TERM 3538 2601568 - 2601558 - G 70 -5.4 -4.43307 | CCGTCAACAAAAGAA GGAA TAG TTCC AAGACTGGTTTTTCT TERM 3539 2601871 - 2601883 + g 78 -7.7 -4.44046 | opp_overlap 2601870 GGCGATCCCACAACT CTGCA ACC TGCAG TTTATTTCCGCTCAC TERM 3540 2602844 - 2602866 + r 71 -9.8 -3.06515 | opp_overlap 2602844, overlap 2602843 TCCAGATACAAGGAA TCGCCGAAGC ATG GCTACGGTGA ATTTTGGGCATAAAA TERM 3541 2602885 - 2602900 + r 71 -10.4 -2.80398 | opp_overlap 2602885, overlap 2602882 TTGGGCATAAAAAAA CCCAGC CGAA GCTGGG TCGTTGCGTTGGTTA TERM 3542 2602900 - 2602885 - R 100 -10.4 -5.60993 | opp_overlap 2602882 2602885 TTGGGCATAAAAAAA CCCAGC CGAA GCTGGG TCGTTGCGTTGGTTA ant 2603843 - 2602920 - | antirepressor protein TERM 3543 2603672 - 2603650 - G 83 -12.8 -3.31263 | ACCCCACCGGCAGAA GGTATGGTGA TTT CCACCATACC ATTCGAGAATCGTTG UTI89_C2638 2604353 - 2604610 + | hypothetical protein mnt 2604634 - 2604882 + | regulatory protein UTI89_C2640 2604925 - 2605524 + | hypothetical protein TERM 3544 2605740 - 2605751 + G 74 -3 -4.93696 | CCAATACATCGTAGA GTTA GCGA TAAC TTTTTGATATTTGCG UTI89_C2641 2605509 - 2605928 + | hypothetical protein hkcB 2605951 - 2606274 + | hypothetical protein UTI89_C2643 2608434 - 2606275 - | DNA transfer protein UTI89_C2644 2609783 - 2608434 - | DNA transfer protein UTI89_C2645 2610486 - 2609794 - | DNA transfer protein TERM 3545 2610192 - 2610204 + g 72 -7.7 -3.99324 | TCTGATAGCGAGCCT GACCT GCA AGGTC TTTATACTGCTGAGA UTI89_C2646 2610944 - 2610489 - | head assembly protein UTI89_C2647 2611645 - 2610944 - | DNA stabilization protein UTI89_C2648 2613063 - 2611645 - | DNA stabilization protein TERM 3546 2612795 - 2612813 + g 78 -8.8 -4.17701 | ACGCGACCACTTCCG GCGACGTC ACC GACTTCGC TTTCTCCTTTGTACA UTI89_C2649 2613534 - 2613073 - | hypothetical protein TERM 3547 2613337 - 2613349 + g 91 -9.1 -4.60797 | opp_overlap 2613337 ATCATCGTCAGGTAA CGGCA TGA TGCCG TTTTCTGTATCAGCA UTI89_C2650 2613742 - 2613515 - | hypothetical protein TERM 3548 2613738 - 2613723 - G 100 -10.4 -5.06414 | TTCTCCCAATAAAAA TGGGGC CGAA GCCCCA CCAAAATTACTGCCC UTI89_C2651 2614998 - 2613745 - | hypothetical protein UTI89_C2652 2615910 - 2615017 - | scaffold protein UTI89_C2653 2618199 - 2616001 - | portal protein TERM 3549 2616739 - 2616720 - G 81 -12.2 -3.14132 | TGCCGTCCTCATTAA CGATACGC ATCG GCGTATCG CTGCCATAGACTTCA TERM 3550 2617050 - 2617060 + g 74 -2.4 -5.08601 | overlap 2617042 TGACCATCGGCAGGA ACGC CGG GCGC TTTTTGTTGCGCTCC TERM 3551 2618169 - 2618185 + g 93 -2.2 -5.626 | opp_overlap 2618153 TGCACAGCACCTTGC GATGCC AGTCA GTCATC TTTTTTTCTGCCATA UTI89_C2654 2619616 - 2618201 - | terminase large subunit UTI89_C2655 2620053 - 2619613 - | hypothetical protein hkbM 2620298 - 2620056 - | hypothetical protein TERM 3552 2620399 - 2620359 - R 76 -10.5 -3.32844 | opp_overlap 2620372 CCGTGTAGGGTATAA GCCATTGTCGAGACCACTC ATT GAATGGTCTCTGCAATAAC CGATGTCTTTCCATC UTI89_C2657 2621137 - 2620526 - | hypothetical protein TERM 3553 2620879 - 2620892 + g 70 -6.7 -4.04206 | opp_overlap 2620879 TGTTTTTATAGCAAA GCTCA AAGT TGAGC TTTGTATCAAACTCA TERM 3554 2621239 - 2621222 - R 100 -10.5 -5.4251 | TGCAGATATAAAAAA GCCCCGC GAAT GCGAGGC TAAATCCTGGTATTT UTI89_C2658 2621426 - 2621274 - | hypothetical protein UTI89_C2659 2621851 - 2621414 - | hypothetical protein UTI89_C2660 2622324 - 2621848 - | lysin UTI89_C2661 2622631 - 2622308 - | holin TERM 3555 2622787 - 2622756 - H 100 -15.3 -4.11692 | opp_overlap 2622730, overlap 2622757 TATGCACGGGCAAAA CGGCATGAGGTTG TTAGCG CAACCTCATGCCA CCCGCTTTCACGAAG TERM 3556 2622786 - 2622757 - H 100 -16.6 -3.06694 | opp_overlap 2622730, overlap 2622756 ATGCACGGGCAAAAC GGCATGAGGTTG TTAGCG CAACCTCATGCC ACCCGCTTTCACGAA UTI89_C2662 2622856 - 2623062 + | hypothetical protein TERM 3557 2623210 - 2623176 - T 100 -6.5 -5.63517 | gap 1, overlap 2623205 TGTGCAAACAAAAAA GCCACCGTT-GCAACT TAAG AGTCACTAACGGCAGC TTACCTTCTAATTAT UTI89_C2663 2623746 - 2623228 - | bacteriophage ST64T antitermination protein gp23 ninH 2623931 - 2623743 - | hypothetical protein rus 2624290 - 2623928 - | Holliday-junction resolvase hkbD 2624577 - 2624287 - | hypothetical protein roi 2625299 - 2624577 - | DNA-binding protein Roi TERM 3558 2624910 - 2624932 + g 70 -4.9 -4.46212 | gap 1, opp_overlap 2624910, overlap 2624916 TTTAGGTGCGACAAT TGCGAGCTGG TTTT CCAG-TTGCA TTTTCTGCTCAGCAA UTI89_C2668 2625808 - 2625461 - | hypothetical protein ninE2 2625987 - 2625811 - | bacteriophage lambda nin 60-like protein ninB2 2626424 - 2625984 - | hypothetical protein UTI89_C2671 2626702 - 2626604 - | bacteriophage HK97 gp56 TERM 3559 2626671 - 2626651 - G 100 -7.6 -5.5074 | opp_overlap 2626651 TAATCCAATAAAAAA GGGCTACT GTGTA AATAGCCC CTGTTATTAGCTCAG UTI89_C2672 2628075 - 2626699 - | bacteriophage Nil2 gene P DnaB analogue UTI89_C2673 2628959 - 2628072 - | hypothetical protein UTI89_C2674 2629294 - 2629022 - | hypothetical protein UTI89_C2675 2629610 - 2629317 - | bacteriophage 343 regulatory protein CII TERM 3560 2629345 - 2629364 + g 100 -9.2 -5.5112 | opp_overlap 2629345 TGTATTTGATCAGAA CGCTCGGT TGCC GCCGGGCG TTTTTTATTGGTGAG cro 2629904 - 2629719 - | Cro protein UTI89_C2677 2629985 - 2630635 + | repressor protein TERM 3561 2630637 - 2630650 + T 100 -9.5 -6.4753 | opp_overlap 2630636 2630637 CAAACCTTCCATAAG GGGGC ATTC GCCCC TTTTTTTTTATTTCC UTI89_C2678 2631145 - 2630756 - | hypothetical protein UTI89_C2679 2631157 - 2631456 + | phage regulatory protein N ral 2631535 - 2631735 + | bacteriophage lambda restriction inhibitor protein ral TERM 3562 2631726 - 2631743 + F 82 -6.9 -4.97405 | opp_overlap 2631723 2631726 TAAACAGAATAACAA GGCTGCC TGAT GGTGGCC TTTATTTTTGTCCGT TERM 3563 2632048 - 2632069 + G 75 -5.3 -4.66987 | gap 1, opp_overlap 2632048, overlap 2632067 AGATGGATGTCCAAA CGATAGATAT TTT ATATCT-TCG TTTTATTACGATATA UTI89_C2681 2631794 - 2632216 + | hypothetical protein TERM 3564 2632222 - 2632237 + F 83 -7.5 -4.87389 | opp_overlap 2632218 GGTTAAGTAATTTCA GGCCG CATAGT CGGCC TTTATTTTTGGCATA TERM 3565 2632312 - 2632267 - f 100 -12.7 -4.53119 | AAACAACAGAATAAA CACTGCACTGTGTATTCATTC CAAC GAGTGAATACACGGAGCAATG TCGCTCGTAACTAAA TERM 3566 2632364 - 2632385 + F 100 -10.2 -5.86061 | TGTTGGAAATCTTCT TTGCCCTC CAGTGT GAGGGCAA TTTTTTTTGATGGAG UTI89_C2682 2633400 - 2633531 + | protease inhibitor FtsH kil2 2633516 - 2633668 + | kil protein of bacteriophage HK97 UTI89_C2684 2633665 - 2633823 + | hypothetical protein UTI89_C2685 2633744 - 2633914 + | hypothetical protein erf 2633925 - 2634530 + | bacteriophage HK97 gp40 TERM 3567 2634770 - 2634757 - g 70 -5.3 -4.41206 | opp_overlap 2634757 AATTACCGGAGAAAA CATCA GGGT TGATG TTTATCAGGGGCAAA UTI89_C2687 2634530 - 2634913 + | bacteriophage HK97 gp40 TERM 3568 2634979 - 2635007 + G 72 -11.7 -2.52464 | GACCCGCGCCGCTGT TCCGGCAATTCCG TAT CGGAGGTGCTGGA TAAATTCAGAAAAAA hkaJ 2634937 - 2635233 + | hypothetical protein hkaH 2635310 - 2635846 + | hypothetical protein UTI89_C2690 2636144 - 2636716 + | hypothetical protein UTI89_C2691 2637289 - 2636939 - | hypothetical protein UTI89_C2692 2636993 - 2637277 + | hypothetical protein TERM 3569 2637281 - 2637298 + gF 95 -9.1 -4.83243 | opp_overlap 2637281 GACAATGAATGATAA TCCTCGC ACTC GCGGGGA TTTCTTTTATCTGAA TERM 3570 2637314 - 2637327 + FH 83 -5.9 -5.18371 | TTTCTTTTATCTGAA CTCGC TACG GCGGG TTTTGTTTTATGGAG UTI89_C2693 2637350 - 2637517 + | hypothetical protein TERM 3571 2637510 - 2637523 + F 100 -9.5 -5.4833 | opp_overlap 2637503 2637509 2637510, overlap 2637509 2637519 TGAAAGAACACCAAG CCGCC TGAT GGCGG TTTTTTATTGCCTGA hkaC 2637575 - 2637775 + | hypothetical protein dsdC 2638903 - 2637962 - | DNA-binding transcriptional regulator DsdC TERM 3572 2639057 - 2639068 + H 86 -2.2 -5.626 | AATTTTATCGTTTGT CAGC CTGC GTTG TTTTTTTGTCCAATA UTI89_C2696 2639115 - 2640452 + | permease DsdX TERM 3573 2640763 - 2640737 - g 77 -5.8 -4.65895 | overlap 2640757 CCTGCTATGCAAAAA CGGCTGGAAA AGGAATA TCACCAGCCG ATCGCCGGGCAATTG dsdA 2640470 - 2641798 + | D-serine dehydratase emrY 2643444 - 2641906 - | multidrug resistance protein Y TERM 3574 2642710 - 2642732 + gF 71 -8.6 -3.42574 | opp_overlap 2642709 2642710 2642713, overlap 2642713 GATCAGAGAAATAAC TGATACTACT GTT AGTAGTATTA TTGTACTCGAGTTGA TERM 3575 2642713 - 2642729 + gF 71 -8.1 -3.84674 | opp_overlap 2642710 2642709 2642713, overlap 2642710 CAGAGAAATAACTGA TACTACT GTT AGTAGTA TTATTGTACTCGAGT TERM 3576 2643015 - 2643026 + gF 82 -2.2 -5.31877 | TTGACCATAATGCCA GAGC AAAT GTTC TTTTTTCTGGTGGAT UTI89_C2699 2643131 - 2643469 + | hypothetical protein emrK 2644607 - 2643444 - | multidrug resistance protein K TERM 3577 2644229 - 2644256 + g 83 -10 -4.1337 | gap 1, opp_overlap 2644229, overlap 2644232 ATTGTTGATACTGAA TAC-GTGCTGAAG CGA CTTCGGCACTGTA TTGTTTATCCTGTAA TERM 3578 2644232 - 2644252 + g 80 -11.9 -3.39301 | opp_overlap 2644229, overlap 2644229 GTTGATACTGAATAC GTGCTGAAG CGA CTTCGGCAC TGTATTGTTTATCCT evgA 2645023 - 2645637 + | DNA-binding transcriptional activator EvgA TERM 3579 2645941 - 2645916 - g 75 -5.5 -4.60924 | overlap 2645905 TAAATCTTTTAAAAA GAGCGTTAAAT ATCA AATTAACACTC CGGGAATACGCAGAT TERM 3580 2646879 - 2646860 - g 100 -4.3 -5.66989 | opp_overlap 2646860 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC ATATTATTATGAGCT TERM 3581 2647662 - 2647679 + G 70 -5.5 -4.42513 | CCTTATGTAATCTGC CAGCAAG CGAA CATGCTG TTTATATTTGTGGTT TERM 3582 2647773 - 2647754 - g 70 -3.6 -4.65722 | gap 1, overlap 2647762 GTAGAGAGAAATAAA GCGATCAAT GCA ACTG-TCGC AAAAAGCCAGTTTCT TERM 3583 2647791 - 2647779 - g 90 -9.1 -4.58283 | CAACTGTCGCAAAAA GCCAG TTT CTGGC AACAATGAGTCACGA evgS 2645642 - 2649235 + | hybrid sensory histidine kinase in two-component regulatory system with EvgA TERM 3584 2649242 - 2649268 + T 80 -10.9 -3.34517 | opp_overlap 2649239 2649240, overlap 2649240 AATGACTAAATAGCG GCTCCCACAAT GTTCA AATGTGGGAGC TATTTACCAGCACAT yfdE 2650475 - 2649291 - | hypothetical protein TERM 3585 2649364 - 2649379 + g 75 -4.6 -4.87786 | opp_overlap 2649358, overlap 2649335 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 3586 2650481 - 2650457 - G 83 -6.5 -5.0133 | gap 1, opp_overlap 2650456 2650457 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA yfdV 2651454 - 2650510 - | putative transporter YfdV UTI89_C2705 2653218 - 2651524 - | putative oxalyl-CoA decarboxylase TERM 3587 2653040 - 2653025 - G 77 -6.1 -4.63218 | overlap 2653027 TTTTGGGTAAGAAAA CCGCT TGCTGC AGCGG CATAGCCTGCCGACT yfdW 2654522 - 2653272 - | formyl-coenzyme A transferase TERM 3588 2654979 - 2654943 - R 93 -11.9 -3.92542 | opp_overlap 2654942 2654941 GCGAGCGCCAAATAA TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA AATTGTCGACTGGAG yfdX 2655669 - 2655034 - | hypothetical protein TERM 3589 2656019 - 2656033 + G 75 -4.3 -4.85822 | GTCTCTATTATGGCA TGCAA TGTTT TTGCA TTTTCTATTTCTGGT TERM 3590 2656099 - 2656086 - g 100 -6.7 -5.46276 | AAGAGACAGAAAAAA CGTCA GCGA TGACG ACAACTCACTCTACA ypdI 2655965 - 2656240 + | hypothetical protein yfdY 2656559 - 2656317 - | hypothetical protein ddg 2656846 - 2657832 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 3591 2657893 - 2657866 - T 78 -11.4 -2.90496 | opp_overlap 2657866, overlap 2657863 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3592 2657866 - 2657893 + T 100 -11.4 -5.4756 | opp_overlap 2657866 2657863 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3593 2658282 - 2658301 + T 100 -13.6 -3.89215 | opp_overlap 2658282 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGGCG TERM 3594 2658301 - 2658282 - T 100 -13.6 -4.8622 | opp_overlap 2658282 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGGCG UTI89_C2711 2659562 - 2658324 - | aminotransferase TERM 3595 2658770 - 2658781 + g 77 -5.8 -4.63218 | TAATACGTGCCAACG CGCT GACC AGCG TTTTGTTACCGACCA TERM 3596 2660546 - 2660533 - g 70 -3.7 -4.59773 | overlap 2660535 2660536 GTTGAGGGCGAAAAA GAGGC CAGC GCCGC GCGGCAGGCCAAGCT TERM 3597 2660556 - 2660535 - g 72 -7.9 -3.91506 | gap 1, overlap 2660533 2660536 TGAGGGCGAAAAAGA GGCCAG-CGC CGC GCGGCAGGCC AAGCTGGCGCTGGAT TERM 3598 2660807 - 2660786 - g 81 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC ypdA 2659939 - 2661636 + | hypothetical protein ypdB 2661633 - 2662388 + | hypothetical protein TERM 3599 2662923 - 2662939 + G 84 -7.9 -4.60797 | overlap 2662910 ATGCCGCCGGGCAAT TCGCAGC CGC GCGGCGA TTTTCTCTATCACAG TERM 3600 2662992 - 2663015 + G 82 -3 -5.21709 | overlap 2663002 2663003 AATTATGCCCAGCCG CTCACCCGCG AGAG CGTGGCTCAG TTTTTTAATATCACG ypdC 2662401 - 2663258 + | transcriptional regulator YpdC UTI89_C2715 2665756 - 2663261 - | putative phosphoenolpyruvate-protein phosphotransferase ypdD TERM 3601 2664114 - 2664090 - G 78 -8.5 -4.23213 | opp_overlap 2664090 CCGATACTGAAGAAA TCGACCTCATC GCA GAAGTGGTCGA TGATGTAGCACACCG TERM 3602 2664642 - 2664676 + g 75 -5.1 -4.72486 | gap 2, opp_overlap 2664647, overlap 2664645 2664647 2664647 CGCTTTTTATCACGG GAATAGGC-CA-GCTGC GCG GCAGCTTGCGCCTGTTG TTTTTGGCGTTTATC TERM 3603 2664645 - 2664673 + g 77 -6.8 -4.45259 | gap 2, opp_overlap 2664647, overlap 2664642 2664647 2664647 TTTTTATCACGGGAA TAGGC-CA-GCTGC GCG GCAGCTTGCGCCTG TTGTTTTTGGCGTTT ypdE 2666818 - 2665781 - | exoaminopeptidase UTI89_C2717 2667903 - 2666818 - | aminopeptidase TERM 3604 2667264 - 2667223 - G 100 -15.4 -3.22298 | gap 2 GCCATTCACCAGCAA GGTGCGCGTCATATCAGAGC AGTA GCCCTGATA-GA-GCGCACC GAAATCGAGAGTGAC TERM 3605 2667302 - 2667353 + g 81 -13 -2.62184 | gap 1, opp_overlap 2667301 CCCGCTGTAACAATC TTGTCGCTGGC-TTTGCCGTGCGGC AGC GCCCCACGCCAGCCGCTGGCGACAA TGGTGTCAAAAGAGG UTI89_C2718 2669166 - 2667919 - | putative transport protein TERM 3606 2668594 - 2668620 + g 76 -12.4 -2.54732 | opp_overlap 2668596 2668601, overlap 2668593 2668596 2668601 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCATTTCAC TERM 3607 2668601 - 2668613 + g 72 -5.5 -4.56607 | opp_overlap 2668596 2668601, overlap 2668596 2668594 2668593 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC UTI89_C2719 2669565 - 2669188 - | putative PTS system IIB component YpdH TERM 3608 2669720 - 2669695 - R 72 -8.3 -3.70674 | overlap 2669693 2669696 2669698 GTATGATTTAAAAGA TTATCGGGAGA GTTA CCTCCCGATAT AACAGGAAGGATTTA TERM 3609 2669719 - 2669696 - R 79 -11.8 -2.81922 | overlap 2669695 2669693 2669698 TATGATTTAAAAGAT TATCGGGAGA GTTA CCTCCCGATA TAACAGGAAGGATTT TERM 3610 2669717 - 2669698 - R 72 -10 -2.95081 | overlap 2669696 2669695 2669693 TGATTTAAAAGATTA TCGGGAGA GTTA CCTCCCGA TATAACAGGAAGGAT glk 2670698 - 2669733 - | glucokinase yfeO 2670902 - 2672158 + | hypothetical protein ypeC 2672273 - 2672599 + | hypothetical protein TERM 3611 2672656 - 2672623 - T 75 -9.5 -3.44319 | opp_overlap 2672633, overlap 2672601 2672624 GTCAATGGAGCACAA TGCCTGATGCGACGC TAGC GCGTCTTATCAGGCC TACAAACCAGCTCTT TERM 3612 2672655 - 2672624 - T 84 -13 -2.6627 | opp_overlap 2672633, overlap 2672601 2672623 TCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCAGCTCT mntH 2673978 - 2672740 - | manganese transport protein MntH TERM 3613 2674009 - 2673994 - H 72 -7.6 -4.07568 | opp_overlap 2673994 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTACGTTA TERM 3614 2674907 - 2674928 + G 70 -7.3 -4.00782 | CGTCGTTGCGGCGCT GGTACTGAA CATG TTCAGCACC TTTATCGTGCTGTCG nupC 2674275 - 2675516 + | nucleoside permease NupC TERM 3615 2675566 - 2675519 - T 100 -17.2 -3.01791 | opp_overlap 2675520 2675533, overlap 2675522 2675533 ACTGGTGCTGTAAGA CCATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC TERM 3616 2675520 - 2675565 + T 100 -16.3 -3.17212 | opp_overlap 2675519 2675522 2675533, overlap 2675533 CTGGTGCTGTAAGAC CATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3617 2675563 - 2675522 - T 100 -17.5 -2.73875 | opp_overlap 2675520 2675533, overlap 2675519 2675533 GGTGCTGTAAGACCA TACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCC TGTTAATCAGCTAAT TERM 3618 2675533 - 2675552 + T 100 -15 -5.04987 | opp_overlap 2675533 2675522 2675519, overlap 2675520 ACCATACATAAAAAA GCCGGGGA TAAT TCCCCGGC TTTTTTACGCCTGTT TERM 3619 2675552 - 2675533 - T 100 -15 -5.43414 | opp_overlap 2675520 2675533, overlap 2675522 2675519 ACCATACATAAAAAA GCCGGGGA TAAT TCCCCGGC TTTTTTACGCCTGTT yfeA 2677815 - 2675566 - | hypothetical protein TERM 3620 2677036 - 2677020 - G 77 -2.9 -5.03227 | AGATGATAAAGAAAA CAGGTAC CAG GTAACCG GCAATAAAGTCATTT TERM 3621 2677834 - 2677846 + H 79 -4.8 -5.09895 | opp_overlap 2677827, overlap 2677822 GAAGCAAACAGGGGC CAGC CTGTT GCTG TTTTTTCAGTCAGTG TERM 3622 2677952 - 2677933 - H 100 -11.4 -5.4251 | opp_overlap 2677933 GGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTTGAAATTTGGTGG TERM 3623 2677933 - 2677952 + H 77 -9.2 -3.73107 | opp_overlap 2677933 GGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTTGAAATTTGGTGG yfeC 2678373 - 2678732 + | hypothetical protein TERM 3624 2678859 - 2678845 - g 71 -2.8 -4.87318 | overlap 2678837 TGGAAAACGGAAAAA TTTCCC GGC GTGAAA GGCGGTCGTGCCAGA yfeD 2678734 - 2679126 + | hypothetical protein TERM 3625 2679171 - 2679121 - T 89 -14.9 -2.84059 | opp_overlap 2679135 2679170, overlap 2679135 GACATAGATGAATCA GCATAAATAAAAAACGGCAGGGG TATCT CTCCTGCCGTTTATCTTTTATGC GCTAATTAGTGCTGA TERM 3626 2679157 - 2679135 - T 100 -10.5 -5.73978 | opp_overlap 2679135, overlap 2679121 AGCATAAATAAAAAA CGGCAGGGG TATCT CTCCTGCCG TTTATCTTTTATGCG TERM 3627 2679135 - 2679157 + T 100 -12.7 -4.51238 | opp_overlap 2679121 2679135 AGCATAAATAAAAAA CGGCAGGGG TATCT CTCCTGCCG TTTATCTTTTATGCG gltX 2680592 - 2679177 - | glutamyl-tRNA synthetase TERM 3628 2681282 - 2681250 - R 72 -9.9 -3.19463 | opp_overlap 2681251 2681259 2681278, overlap 2681251 2681259 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCAATTTGCGA TERM 3629 2681251 - 2681281 + r 89 -14.9 -2.9348 | opp_overlap 2681251 2681250 2681259, overlap 2681259 2681278 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCAATTTGCG TERM 3630 2681281 - 2681251 - R 84 -13.4 -2.51464 | opp_overlap 2681251 2681259 2681278, overlap 2681250 2681259 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCAATTTGCG TERM 3631 2681273 - 2681259 - R 93 -9.2 -5.17576 | opp_overlap 2681251 2681259, overlap 2681251 2681250 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC TERM 3632 2681259 - 2681273 + r 95 -8.5 -5.24989 | opp_overlap 2681259 2681251 2681250, overlap 2681251 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC xapR 2682258 - 2681359 - | DNA-binding transcriptional activator XapR TERM 3633 2682168 - 2682155 - G 76 -9.5 -3.75535 | TGAGACATATTTAAA CGCGC TGCT GCGCG ACCAAAATGCAACTC UTI89_C2737 2682442 - 2682284 - | hypothetical protein TERM 3634 2682486 - 2682464 - R 72 -5.5 -4.4648 | ACCTTTATCATAAAA GCAGCCCCA AGGAA CAGAGCTGC GAATCCTTTTAATGT xapB 2683751 - 2682495 - | xanthosine permease TERM 3635 2683175 - 2683187 + g 88 -5.5 -5.24129 | overlap 2683165 CCAGCTTGCTGGCAA GCGAT GTA GTCGC TTTTTTCTCCGCAAC TERM 3636 2683516 - 2683505 - G 79 -2.2 -5.24531 | ATGCCGCATAAAAAA GTAC GCCC GCAC ACACCAGGTGACACA TERM 3637 2683795 - 2683775 - R 74 -11.1 -2.78384 | opp_overlap 2683775 2683776 CCTTGTCGCATCATA TGGCCTCAC TCA GTGAGGCCG TTTATTGTTGTTTTA TERM 3638 2683775 - 2683795 + r 100 -13.3 -4.66418 | opp_overlap 2683775, overlap 2683776 CCTTGTCGCATCATA TGGCCTCAC TCA GTGAGGCCG TTTATTGTTGTTTTA TERM 3639 2683776 - 2683794 + r 100 -14.6 -3.37411 | opp_overlap 2683775, overlap 2683775 CTTGTCGCATCATAT GGCCTCAC TCA GTGAGGCC GTTTATTGTTGTTTT xapA 2684645 - 2683812 - | purine nucleoside phosphorylase TERM 3640 2684099 - 2684111 + g 78 -9.1 -3.92832 | opp_overlap 2684088 ACACGCCCTCCGTCA GAGGG ACC CCCTC TTCTTTCGCCACTTT TERM 3641 2685378 - 2685402 + r 70 -9.3 -3.18199 | opp_overlap 2685378 ACCAAACCTATTATA CCGGCGATA ACGGTTA TGTCGCCGG TTGGGTTGCAGGTTA TERM 3642 2685664 - 2685686 + r 86 -13.5 -2.59526 | overlap 2685659 TAATTTCTGATTGAT TACTGCCGG AGCTC CCGGCAGTA TGAATTCACTTTATA yfeR 2686623 - 2685697 - | putative transcriptional regulator LysR-type TERM 3643 2686931 - 2686946 + G 73 -9 -3.69354 | TTTGTGGGTAATGTG CAGCAC CTTC GTGCTG TTTCCGATTCTGGGC yfeH 2686713 - 2687711 + | putative cytochrome oxidase UTI89_C2742 2687926 - 2687708 - | hypothetical protein ligA 2689943 - 2687928 - | NAD-dependent DNA ligase LigA TERM 3644 2689982 - 2689966 - RH 95 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAGGAGTTA zipA 2691063 - 2690014 - | cell division protein ZipA algP 2690481 - 2690786 + | regulatory protein AlgP TERM 3645 2691113 - 2691147 + FH 70 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3646 2691266 - 2691276 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3647 2691545 - 2691555 + G 72 -6.8 -4.20516 | AACTGGATTGCTGCT CCGT TCA ACGG TTTATTGGCTGAACA cysZ 2691242 - 2692003 + | putative sulfate transport protein CysZ TERM 3648 2692062 - 2692043 - f 80 -10.6 -3.34398 | opp_overlap 2692043, overlap 2692041 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3649 2692043 - 2692062 + F 100 -12.8 -3.7347 | opp_overlap 2692041 2692043 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3650 2692668 - 2692654 - g 82 -3.4 -5.19261 | overlap 2692655 AAATTCATGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2692188 - 2693159 + | cysteine synthase A TERM 3651 2693203 - 2693188 - Tf 93 -9 -5.08011 | opp_overlap 2693188, overlap 2693179 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC TERM 3652 2693188 - 2693203 + TF 100 -9 -5.26316 | opp_overlap 2693179 2693188 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC UTI89_C2748 2693770 - 2693477 - | hypothetical protein ptsH 2693543 - 2693800 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3653 2694168 - 2694127 - g 72 -8.9 -3.73402 | gap 1, opp_overlap 2694133 2694133, overlap 2694132 2694135 ATAGCCCTGATTAAA GATAAGCACATGA-CAGCTG ACG CAGCTGCTCATGAAGTTATC GAAGGTCAGGCTTCT TERM 3654 2694160 - 2694135 - g 75 -11.3 -3.00128 | gap 1, opp_overlap 2694133 2694133, overlap 2694132 2694127 GATTAAAGATAAGCA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2693845 - 2695572 + | phosphoenolpyruvate-protein phosphotransferase crr 2695613 - 2696122 + | glucose-specific PTS system component TERM 3655 2696159 - 2696142 - T 100 -12.7 -4.65895 | opp_overlap 2696142 TGCTGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTTATGCTTCA TERM 3656 2696142 - 2696159 + T 100 -12.7 -5.71983 | opp_overlap 2696142 TGCTGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTTATGCTTCA pdxK 2697016 - 2696165 - | pyridoxal kinase TERM 3657 2696456 - 2696469 + g 77 -6.7 -4.56597 | CACCCACTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA yfeK 2697121 - 2697489 + | hypothetical protein cysM 2698403 - 2697492 - | cysteine synthase B TERM 3658 2697565 - 2697549 - G 77 -12.3 -2.70354 | overlap 2697545 CCCGGTAGAAAGGTA GCGATCG CCA CGATCGC AGATGATCGCCACCA TERM 3659 2698516 - 2698489 - R 90 -9.1 -4.72272 | gap 1, opp_overlap 2698489 2698506 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysA 2699635 - 2698538 - | sulfate/thiosulfate transporter subunit TERM 3660 2698655 - 2698632 - G 72 -7.4 -3.99228 | gap 1, overlap 2698635 AGACCAACGTATAAA CGATCGCCACG CTG CGGGGC-ATCG TCGCCATGCATCACG cysW 2700500 - 2699625 - | sulfate/thiosulfate transporter permease subunit cysU 2701333 - 2700500 - | sulfate/thiosulfate transporter subunit cysP 2702349 - 2701333 - | thiosulfate transporter subunit TERM 3661 2702494 - 2702471 - R 86 -11 -4.01135 | GGGAATAAGACGAAA TCCTCCCCAC AAAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2703364 - 2702507 - | short chain dehydrogenase murQ 2703578 - 2704474 + | N-acetylmuramic acid-6-phosphate etherase murP 2704478 - 2705902 + | N-acetylmuramic acid phosphotransfer permease UTI89_C2762 2706065 - 2705922 - | hypothetical protein TERM 3662 2706056 - 2706029 - Gf 100 -11.3 -5.16071 | opp_overlap 2706029 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGTT ACTGGCTGGCC TTTAATCAATGAATC TERM 3663 2706029 - 2706056 + gF 100 -13.5 -3.767 | opp_overlap 2706029 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGTT ACTGGCTGGCC TTTAATCAATGAATC TERM 3664 2706087 - 2706077 - gR 70 -6.8 -4.10331 | TCAATGAATCAGAAA CGCT TAC AGCG CCATCAGCTTGTCCA yfeX 2707006 - 2706080 - | hypothetical protein TERM 3665 2706514 - 2706539 + Gg 74 -6 -4.54047 | opp_overlap 2706507 2706505, overlap 2706516 TGATAACAGCCACTT CGCGGCGCGT CTCTTC ACCCGCCGGG TTTTCTGTACCGTCA UTI89_C2763 2706065 - 2706991 + | hypothetical protein TERM 3666 2707001 - 2707019 + gT 78 -10.3 -3.63341 | opp_overlap 2707001 TCCTGAAAATAATAA TGCCACG CAATC CGTGGCA TTGTTGGGCGCTATT TERM 3667 2707019 - 2707001 - GT 85 -10.3 -4.20868 | opp_overlap 2707001 TCCTGAAAATAATAA TGCCACG CAATC CGTGGCA TTGTTGGGCGCTATT yfeY 2707650 - 2707075 - | hypothetical protein TERM 3668 2707422 - 2707402 - G 77 -3.1 -5.06451 | CATCACTTCAAAAAA GCGCACCAC GTT GCCGTTCGC GGTTTTCATTCCGCT yfeZ 2708166 - 2707711 - | hypothetical protein TERM 3669 2707955 - 2707939 - G 75 -4.3 -4.75372 | overlap 2707941 ACCACTCAGCAAAAA TGCCAGC ACC GCCGGAA TACCGGGAATCAACC ypeA 2708683 - 2708147 - | putative acetyltransferase TERM 3670 2709587 - 2709576 - g 72 -5.8 -4.36914 | overlap 2709577 CGTTTCGCCAGAAAA TCGC CACA GCGA TTGCCGAAGGCGTGA amiA 2708786 - 2709655 + | N-acetylmuramoyl-l-alanine amidase I TERM 3671 2709883 - 2709929 + G 100 -13.9 -3.69323 | gap 2 GCCTGCTTCCGCCAC CGCTCATCGTC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCG TTTCACTGGTAGTGC TERM 3672 2710190 - 2710216 + G 84 -10.8 -3.81951 | opp_overlap 2710181 2710183 2710193, overlap 2710193 CTCAAACATCGTAAC GAACAGCGCGGC ATT GGCGGGCTGTTC TTTGATGATCTGAAC TERM 3673 2710193 - 2710213 + G 70 -6.7 -4.03811 | opp_overlap 2710181 2710183 2710193, overlap 2710190 AAACATCGTAACGAA CAGCGCGGC ATT GGCGGGCTG TTCTTTGATGATCTG TERM 3674 2710342 - 2710322 - g 75 -6.7 -4.29738 | GTAGAGCGACGAAAA GCGATGGCC TAC GGCGAGCGC GAGCGCAATTTTCAG hemF 2709656 - 2710558 + | coproporphyrinogen III oxidase yfeG 2711616 - 2710564 - | transcriptional regulator EutR eutK 2712168 - 2711662 - | ethanolamine utilization protein EutK TERM 3675 2711710 - 2711742 + g 70 -4.8 -4.56597 | overlap 2711712 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCCAGCGGCCA eutL 2712834 - 2712175 - | ethanolamine utilization protein EutL eutC 2713731 - 2712844 - | ethanolamine ammonia-lyase small subunit TERM 3676 2713767 - 2713797 + r 75 -8.9 -3.62096 | gap 1, opp_overlap 2713764 TCAGAAGAACAGTGA CGGATCGCCCGCCC GTTT GGTCAGGCGA-CCG TTTGCCATAATGCCC eutB 2715113 - 2713752 - | regulatory subunit of ethanolamine ammonia-lyase eutA 2716528 - 2715125 - | reactivating factor for ethanolamine ammonia lyase TERM 3677 2716192 - 2716182 - G 77 -6.8 -4.46212 | overlap 2716183 CTGGCGACGACAAAA TCGC CCA GCGA CCGGGAGAGCGCCAT eutH 2717751 - 2716525 - | ethanolamine utilization transport protein EutH TERM 3678 2717734 - 2717716 - G 74 -7.5 -4.12254 | opp_overlap 2717716 2717715 2717718 TATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC TERM 3679 2717882 - 2717913 + r 81 -12.2 -3.00022 | opp_overlap 2717845, overlap 2717845 2717892 ATTGCACCGCGCCAC TGGCGGATGCGGCG TGAA CGCCTTATCCGCCC TATATGTGCAATCCC TERM 3680 2717932 - 2717966 + r 84 -9.9 -4.1552 | opp_overlap 2717942 2717945, overlap 2717933 ATGTGCAATCCCGTC GGCCGGATAAGACGC GGCAA GCGTCGCATCCGGCA TTTATTGCGCCGCTG TERM 3681 2717933 - 2717965 + r 86 -13.4 -3.08991 | opp_overlap 2717942 2717945, overlap 2717932 TGTGCAATCCCGTCG GCCGGATAAGACGC GGCAA GCGTCGCATCCGGC ATTTATTGCGCCGCT eutG 2719182 - 2717968 - | ethanolamine utilization protein EutG iron-containing alcohol dehydrogenase eutJ 2719981 - 2719145 - | ethanolamine utilization protein EutJ TERM 3682 2719335 - 2719356 + gr 79 -3.6 -5.14563 | CCCTGCCCTTCAATA TGCCGGGC CACAAT GTCCGCCA TTTTTTCGTACACCG TERM 3683 2719714 - 2719688 - GR 73 -10.1 -2.98761 | opp_overlap 2719706, overlap 2719685 ACCAGGAGGAAATGA GGTCGCCGCAT GGCTA AAACGGCGACC GAATTGCTGCTCAAG TERM 3684 2720013 - 2719997 - R 71 -8.7 -3.55444 | overlap 2720000 CGGTTACTCCTTAAA CAATGCG AAA CGCATCG ACTAATACACAGCGA eutE 2721395 - 2719992 - | ethanolamine utilization protein EutE acetaldehyde dehydrogenase TERM 3685 2720056 - 2720021 - G 70 -9.8 -3.15699 | gap 2, opp_overlap 2720025, overlap 2720019 2720023 ACGCATCGACTAATA CACAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG-G TTACCCCTTCACCGG TERM 3686 2720055 - 2720023 - G 85 -13.5 -3.13867 | gap 1, opp_overlap 2720025, overlap 2720021 2720019 GCATCGACTAATACA CAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG GTTACCCCTTCACCG TERM 3687 2720673 - 2720705 + g 72 -6.2 -4.33803 | gap 1 TTCATCCACCACTAC CGGCGGGTTGCCAGC GCCT GC-GGCAATCAGACG TTTATTGGTGTGTTT TERM 3688 2720881 - 2720897 + g 71 -2.1 -5.00616 | overlap 2720882 TGGTTGAGCAGCGTG ATCGCCC GCT GGGAGAC TTTTTTCGCCGCCGG TERM 3689 2721100 - 2721114 + g 70 -3.5 -4.60924 | gap 1, opp_overlap 2721086, overlap 2721096 ACGCCTGGTGTGCCG CG-CGC CTGA GCGACG TTTTTGGCAAATTTA eutN 2721694 - 2721407 - | detox protein TERM 3690 2721793 - 2721768 - R 70 -9 -3.15182 | overlap 2721766 ATGAAAAAGGAGAGA GCGTGACGCC CGAATC GACGTCACAC AGGGTGATTACAGGT eutM 2722136 - 2721801 - | detox protein TERM 3691 2721902 - 2721935 + g 71 -9.5 -3.55444 | gap 1 CCAGCTCGCCGATAC GCTGTG-CCGCTGCGG CAC CTGCATCGGTCGCGGC TTTACAGGCTGCAAC eutD 2723149 - 2722133 - | phosphotransacetylase eutT 2723949 - 2723146 - | ethanolamine utilization cobalamin adenosyltransferase TERM 3692 2723799 - 2723788 - G 70 -5.8 -4.16842 | opp_overlap 2723791 TTCATCGTCAACAAA CAGG CGGC CCTG CTCGTCAATAAACTT eutQ 2724647 - 2723946 - | ethanolamine utilization protein EutQ eutP 2725101 - 2724622 - | ethanolamine utilization protein EutP TERM 3693 2725000 - 2725010 + gr 77 -3.2 -5.06414 | ATTATCATTAAATTC CACG GCC TGTG TTTTTCTTGCGAGGG eutS 2725521 - 2725114 - | ethanolamine utilization protein EutS TERM 3694 2725284 - 2725298 + g 90 -11.4 -3.86822 | opp_overlap 2725283 TCAACGCTAAATCAC CGGCGA TCA TCGCCG TTTCTCCGGGAGTTA TERM 3695 2725725 - 2725696 - R 100 -15.1 -3.66378 | overlap 2725697 TATATTGCAGCTAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAAAAAGA TERM 3696 2725724 - 2725697 - R 100 -18.6 -2.79505 | overlap 2725696 ATATTGCAGCTAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAAAAAG maeB 2728021 - 2725742 - | malic enzyme TERM 3697 2726815 - 2726794 - G 72 -10.1 -3.32769 | CGTCGAAATCAGCAA TCGGACGCG TCGC CACGCCCGA CTCCATCGCCGCTTT TERM 3698 2727179 - 2727192 + g 70 -3.8 -4.6635 | CAGCGCCAGGATCAT TGGC GCACGG GCCA TTTTCTTCACCATTT TERM 3699 2727460 - 2727470 + g 71 -3.2 -4.82901 | opp_overlap 2727449 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3700 2728779 - 2728820 + G 100 -13.1 -5.04325 | opp_overlap 2728762, overlap 2728780 GCAACCTGACGCTGC TGTTTTCTTTTGCACAGGC GCGG GCCTGTGCAGAAGCAGGCG TTTTTCTGATTTCGC TERM 3701 2728780 - 2728819 + G 100 -14.4 -3.6151 | overlap 2728779 CAACCTGACGCTGCT GTTTTCTTTTGCACAGGC GCGG GCCTGTGCAGAAGCAGGC GTTTTTCTGATTTCG talA 2728310 - 2729260 + | transaldolase A TERM 3702 2730194 - 2730183 - g 85 -7.2 -4.7657 | overlap 2730184 2730185 GAAAAAGGCGAAAAA GCGC AGCA GCGC TGGAATGAGAAGTTT tktB 2729280 - 2731283 + | transketolase TERM 3703 2731401 - 2731378 - Tf 90 -12.4 -3.35798 | opp_overlap 2731392 ACGGGTGATCCACAA CGTGGGCCAG GCGT CTGGCCCATG CCAGTTATCGCAGGT ypfG 2732403 - 2731360 - | hypothetical protein UTI89_C2791 2732428 - 2732297 - | hypothetical protein TERM 3704 2732402 - 2732391 - Gg 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAT CGCA TGGACGGTACGACCC UTI89_C2792 2732303 - 2732563 + | hypothetical protein yffH 2733131 - 2732529 - | hypothetical protein TERM 3705 2733105 - 2733154 + g 81 -9.3 -4.03234 | overlap 2733106 GATTTGTTGCGTCAT ACCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGGG TTTGTCTGCGCAGGC TERM 3706 2733106 - 2733153 + g 79 -12.8 -3.01726 | overlap 2733105 ATTTGTTGCGTCATA CCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGG GTTTGTCTGCGCAGG aegA 2735151 - 2733172 - | putative oxidoreductase Fe-S binding subunit TERM 3707 2735375 - 2735398 + G 100 -5.2 -5.55698 | gap 1, opp_overlap 2735372, overlap 2735375 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3708 2735375 - 2735397 + G 72 -7.6 -3.91792 | opp_overlap 2735372, overlap 2735375 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3709 2736074 - 2736064 - g 71 -3.2 -4.81212 | overlap 2736066 GTCAGTAGAAGAAAA GACC CGC GATC TCCACGAGGCCAAGC narQ 2735342 - 2737057 + | nitrate/nitrite sensor protein NarQ TERM 3710 2737280 - 2737299 + G 82 -2.8 -5.26875 | gap 1, overlap 2737282 2737283 GGCAATCCTGTTGTG TCTGACAGG TAC CCTGGC-GA TTTTTTCATTGCCCG TERM 3711 2739215 - 2739198 - g 70 -6.9 -4.11363 | AACAAGATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCGCCAGCAATT acrD 2737221 - 2740334 + | aminoglycoside/multidrug efflux system TERM 3712 2740374 - 2740339 - f 73 -9.2 -3.53444 | opp_overlap 2740345 2740346, overlap 2740346 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCCAATG TGTCGCCCTTTTCA ACTTTCCGATTAAGA TERM 3713 2740367 - 2740346 - f 100 -7.3 -5.57396 | opp_overlap 2740346 2740345, overlap 2740339 ATAAGCAATAAAAAA GGCGACA TGCCAATG TGTCGCC CTTTTCAACTTTCCG TERM 3714 2740385 - 2740409 + F 77 -11.5 -2.79609 | opp_overlap 2740388 2740391, overlap 2740384 2740382 2740388 2740391 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCGGGTTCTTG CTGTTTGTACTTTGT TERM 3715 2740388 - 2740406 + F 81 -11 -3.52009 | opp_overlap 2740388 2740391, overlap 2740385 2740384 2740382 2740391 CAACTTTCCGATTAA GAACCTGC TCA GCGGGTTC TTGCTGTTTGTACTT yffB 2740873 - 2741229 + | hypothetical protein dapE 2741233 - 2742360 + | succinyl-diaminopimelate desuccinylase UTI89_C2799 2742388 - 2742588 + | hypothetical protein TERM 3716 2742634 - 2742589 - T 75 -9.8 -3.55973 | opp_overlap 2742596, overlap 2742585 2742594 CAACCGAAGAAGTAA GC-TAAGTGGCCGGATAAGGCG TTAA CGCCGCATCCGGCCA-TGATGC CTGATACAGTCTTAT TERM 3717 2742629 - 2742594 - T 100 -15.4 -3.26428 | opp_overlap 2742596, overlap 2742589 2742585 GAAGAAGTAAGCTAA GTGGCCGGATAAGGCG TTAA CGCCGCATCCGGCCAT GATGCCTGATACAGT ypfH 2743367 - 2742669 - | esterase YpfH ypfI 2745456 - 2743441 - | hypothetical protein TERM 3718 2743590 - 2743600 + g 79 -4.6 -4.96848 | opp_overlap 2743585 TGGTACATAACTGCG CGTC ACT GGCG TTTTTCTGTAAACGC TERM 3719 2745067 - 2745056 - G 72 -5.8 -4.39002 | AAATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA ypfJ 2746334 - 2745471 - | hypothetical protein purC 2747224 - 2746502 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3720 2747397 - 2747424 + r 74 -4 -4.90266 | opp_overlap 2747401, overlap 2747399 2747401 CGTATCATATCAGAA AAAAGGGCCGGA TGAC TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3721 2747399 - 2747422 + r 70 -6.6 -4.07008 | opp_overlap 2747401, overlap 2747397 2747401 TATCATATCAGAAAA AAGGGCCGGA TGAC TCCAGCCCTG TATTTTTACTTGCTA TERM 3722 2747420 - 2747401 - R 100 -11.4 -5.34555 | opp_overlap 2747399 2747397 2747401 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC TERM 3723 2747401 - 2747420 + r 75 -9.2 -3.61182 | opp_overlap 2747401, overlap 2747399 2747397 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC nlpB 2748465 - 2747428 - | lipoprotein TERM 3724 2748051 - 2748079 + g 77 -6 -4.62069 | opp_overlap 2748032, overlap 2748054 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2749375 - 2748479 - | dihydrodipicolinate synthase gcvR 2749503 - 2750075 + | glycine cleavage system transcriptional repressor bcp 2750075 - 2750545 + | thioredoxin-dependent thiol peroxidase perM 2751705 - 2750644 - | putative permease PerM UTI89_C2809 2751736 - 2751912 + | hypothetical protein TERM 3725 2752397 - 2752371 - g 100 -16.6 -3.07816 | opp_overlap 2752380 2752387, overlap 2752373 GCGCGAGCGATGGAA GATCAGCAGCGC AGC GCGCCGCTGACC TGGGTCGGCGCGTTA TERM 3726 2752395 - 2752373 - g 95 -15.6 -3.09878 | opp_overlap 2752380 2752387, overlap 2752371 GCGAGCGATGGAAGA TCAGCAGCGC AGC GCGCCGCTGA CCTGGGTCGGCGCGT yfgC 2751918 - 2753381 + | hypothetical protein yfgD 2753402 - 2753761 + | putative oxidoreductase yfgE 2754645 - 2753899 - | DNA replication initiation factor TERM 3727 2754655 - 2754697 + r 76 -7.7 -4.26393 | opp_overlap 2754651, overlap 2754661 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2756026 - 2754695 - | uracil transporter TERM 3728 2755204 - 2755219 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3729 2756025 - 2756059 + g 90 -4.3 -5.44198 | opp_overlap 2756033, overlap 2756028 2756033 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3730 2756028 - 2756056 + r 80 -6 -4.74161 | opp_overlap 2756033, overlap 2756025 2756033 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3731 2756033 - 2756051 + r 85 -10.3 -4.2711 | opp_overlap 2756033, overlap 2756028 2756025 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT TERM 3732 2756051 - 2756033 - R 100 -11 -5.81412 | opp_overlap 2756028 2756025 2756033 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT upp 2756723 - 2756070 - | uracil phosphoribosyltransferase TERM 3733 2756204 - 2756231 + g 72 -8.4 -3.80573 | overlap 2756205 CCAGCGCAGCGATAC CTTCTGGTGCAG CTAC CAGCACCAGAAC TTTGATGCTGCTGCA TERM 3734 2756205 - 2756230 + g 75 -11.9 -2.88023 | overlap 2756204 CAGCGCAGCGATACC TTCTGGTGCAG CTAC CAGCACCAGAA CTTTGATGCTGCTGC purM 2757020 - 2758057 + | phosphoribosylaminoimidazole synthetase TERM 3735 2758198 - 2758167 - g 100 -13.7 -3.72027 | opp_overlap 2758193 AGTTTTCAGCAATAA GGCTGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3736 2758193 - 2758205 + G 72 -10.5 -3.02144 | opp_overlap 2758167 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACGCATAC purN 2758057 - 2758695 + | phosphoribosylglycinamide formyltransferase TERM 3737 2758713 - 2758732 + F 95 -10.7 -4.74504 | opp_overlap 2758713 2758712 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3738 2758732 - 2758713 - f 74 -10.7 -2.78679 | opp_overlap 2758713, overlap 2758712 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3739 2760703 - 2760666 - g 70 -6.9 -4.10657 | overlap 2760667 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2758861 - 2760933 + | polyphosphate kinase TERM 3740 2760961 - 2760987 + G 74 -10.8 -3.23853 | overlap 2760959 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2760938 - 2762479 + | exopolyphosphatase TERM 3741 2762485 - 2762513 + T 100 -18.2 -3.6279 | CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT yfgF 2764761 - 2762518 - | hypothetical protein TERM 3742 2764646 - 2764635 - G 90 -4.4 -5.32599 | GATAAAAGAGAAAAA CTTC ACCG GAAG AAATATGCGCGAAAG UTI89_C2820 2765095 - 2764943 - | hypothetical protein UTI89_C2821 2765268 - 2764978 - | hypothetical protein UTI89_C2822 2765113 - 2765304 + | hypothetical protein TERM 3743 2765456 - 2765487 + FH 74 -3.8 -4.94222 | CGGCTGCGAAATAAA TACATCATTAATAC ATAT GTTGTGATGATGTA TTTTTATAAATTATT yfgH 2765615 - 2766133 + | putative outer membrane lipoprotein yfgI 2766149 - 2766688 + | hypothetical protein TERM 3744 2766729 - 2766758 + T 90 -12.3 -3.41693 | opp_overlap 2766716 2766734, overlap 2766734 AATTCTTTAGGATAA AAAAACCCTCTGT AGTA ACAGAGGGTTTTG TTCATTCATAGTGCA TERM 3745 2766753 - 2766734 - T 100 -12.2 -5.67063 | opp_overlap 2766729 2766734 TTTAGGATAAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA TERM 3746 2766734 - 2766753 + T 100 -12.2 -4.80178 | opp_overlap 2766734, overlap 2766729 TTTAGGATAAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA guaA 2768359 - 2766782 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3747 2768421 - 2768399 - R 100 -14.9 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA GTCGGGCGA AGAGAATCAGGAGCC guaB 2769963 - 2768428 - | inositol-5-monophosphate dehydrogenase TERM 3748 2768894 - 2768870 - G 74 -8.5 -3.86524 | opp_overlap 2768892, overlap 2768892 ATATCGCCTGAGAAA CGGATACCGCC GTC AGCGATAACCG GAATGCCGGTACCTT TERM 3749 2769346 - 2769360 + g 73 -4.2 -4.79667 | overlap 2769357 ATCATCAACCACCAG CGCTTT TTC AACGCG TTTTTCGTGCATTTT TERM 3750 2769616 - 2769630 + g 74 -2.8 -5.00616 | CTGTGGATCAGTCAC CACG CCAGATT CGTG TTTTTTCACACGGCG xseA 2770056 - 2771432 + | exodeoxyribonuclease VII large subunit TERM 3751 2771445 - 2771419 - T 93 -5.1 -5.49729 | overlap 2771421 2771442 AATCACGTAAAAAAA CGTCTAATCCG TAGAC CGGATAAGAGG CGCCAGCATCGCATC UTI89_C2828 2779552 - 2771501 - | RatA-like protein TERM 3752 2776488 - 2776498 + g 74 -2.4 -5.09426 | GTCACCTTTACCTGT AGCG TTT CGCC TTTTTTCAGCTTCGC TERM 3753 2777865 - 2777844 - G 70 -5.8 -4.2828 | opp_overlap 2777842 2777839 2777856 TCCGAGGCAGTAAAA TCACTGCG CATTCT CGCGGTGA TGTGAGTTTTCACCC TERM 3754 2778859 - 2778849 - G 71 -3.2 -4.77165 | CGTTTGATAACAAAA GGAA TAT TCCC CACAACATTACCGAC TERM 3755 2779631 - 2779597 - R 91 -13.2 -3.14132 | opp_overlap 2779586, overlap 2779599 2779630 CGCTTGTCGCATCAA TATATTTTGCTTAATC CGG GATTAAGCAAAATATG CGGAAACAGCATTCC TERM 3756 2779629 - 2779599 - R 100 -15.8 -3.13403 | opp_overlap 2779586, overlap 2779597 CTTGTCGCATCAATA TATTTTGCTTAATC CGG GATTAAGCAAAATA TGCGGAAACAGCATT TERM 3757 2779661 - 2779638 - R 100 -15.4 -3.63589 | opp_overlap 2779586, overlap 2779630 CAAAATATGCGGAAA CAGCATTCCC TTGC GGGAATGCTG CTGAGTACGCGTTAT sinI 2780650 - 2779673 - | SinI-like protein TERM 3758 2780686 - 2780704 + r 71 -4.5 -4.69962 | overlap 2780689 CTTCAGCGACTGGCC GACTGGC CTTAC GCCAATC TTATTTTTTGGTATA UTI89_C2830 2782939 - 2780705 - | SinH-like protein TERM 3759 2781163 - 2781176 + g 74 -2.3 -5.11389 | overlap 2781158 GTAAGGTACTGGAGA GGGTG ACAG TGCCC TTTTCTTTATCTTGT TERM 3760 2781944 - 2781958 + g 81 -10 -3.87815 | overlap 2781940 GCTACCCATGAGCGA GTGAGC CGC GCTCAC TTTGTCAGGATCAAG TERM 3761 2782876 - 2782839 - G 100 -20.1 -3.01712 | opp_overlap 2782839 TCGTTTTGCTTAACA TTTATCTCTGGCGCCGC GAAA GCAGCACCAGAGATAAA TGTTAGAATAATACA TERM 3762 2782839 - 2782876 + g 95 -15.7 -3.07043 | opp_overlap 2782839 TCGTTTTGCTTAACA TTTATCTCTGGCGCCGC GAAA GCAGCACCAGAGATAAA TGTTAGAATAATACA yfgJ 2783333 - 2783118 - | hypothetical protein engA 2784868 - 2783396 - | GTP-binding protein EngA TERM 3763 2784966 - 2784935 - R 100 -13.8 -3.90048 | opp_overlap 2784941, overlap 2784936 2784941 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3764 2784965 - 2784936 - R 100 -17.3 -2.93708 | opp_overlap 2784941, overlap 2784935 2784941 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3765 2784941 - 2784960 + r 80 -9.2 -4.11216 | opp_overlap 2784936 2784935 2784941 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3766 2784960 - 2784941 - R 100 -11.4 -4.60746 | opp_overlap 2784941, overlap 2784936 2784935 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG yfgL 2786164 - 2784986 - | outer membrane protein assembly complex subunit YfgL TERM 3767 2785412 - 2785396 - G 78 -8.7 -4.18506 | overlap 2785408 CCAGCGCGAAAACAA CGCCGTT AAC AACGACG GGAGTCGTGTCAACA TERM 3768 2785568 - 2785557 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC yfgM 2786795 - 2786175 - | hypothetical protein TERM 3769 2786338 - 2786356 + g 85 -8.2 -4.56775 | GCAGCCCACCCTTCA CCTTTGAT AGC ATCAAGGG TTTTTAGCGCGGCAT TERM 3770 2786607 - 2786619 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2788087 - 2786813 - | histidyl-tRNA synthetase TERM 3771 2788051 - 2788076 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3772 2788160 - 2788114 - R 73 -3 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCC TCAATGTTTC GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 3773 2788189 - 2788169 - R 86 -13.3 -3.00298 | opp_overlap 2788163 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2789316 - 2788198 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase yfgA 2790350 - 2789343 - | hypothetical protein TERM 3774 2790630 - 2790593 - R 95 -12.2 -4.42653 | gap 1, overlap 2790595 ACTTCATTCATAAAA GATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT TERM 3775 2790628 - 2790595 - R 100 -14.8 -3.82117 | gap 1, overlap 2790593 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC yfgB 2791789 - 2790635 - | hypothetical protein TERM 3776 2791014 - 2791002 - G 78 -10.5 -3.48593 | GATTTCTCCAGATAA CGGCG CAC CGCCG CAAGGAACGTTTCGA TERM 3777 2791878 - 2791847 - RH 91 -8.7 -5.04249 | gap 2, opp_overlap 2791846 2791843 2791842, overlap 2791849 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT TERM 3778 2791875 - 2791849 - RH 71 -10.1 -2.75795 | gap 1, opp_overlap 2791846 2791843 2791842, overlap 2791847 TTGAAAAAAGAAACG CCCCGG-TGAGC GGCT GCTCGTCCGGGG GCGCTGCATTGTACA ndk 2792370 - 2791939 - | nucleoside diphosphate kinase UTI89_C2839 2791915 - 2792433 + | hypothetical protein pbpC 2794831 - 2792519 - | penicillin-binding protein 1C TERM 3779 2792905 - 2792921 + g 76 -8 -4.25104 | opp_overlap 2792904 CCTGAGGGCAATCAG CGGCAA CACGT TTGCCG TTTTCATCCAGCCAG TERM 3780 2793807 - 2793794 - G 70 -3.8 -4.60949 | overlap 2793790 CAGACCATAAACAAA CGGT TTGAGC ACCG ATCCTGGCGATCGGA TERM 3781 2794469 - 2794453 - G 70 -10.1 -3.21099 | TGGGGTGAGGATCAA GCAGGCG CGC CACCTGC ATGGTGAGCGTGCTG TERM 3782 2794680 - 2794668 - G 71 -9.1 -3.56092 | TCAGCATCGGCGAAA CGCCA GAG TGGCG TACCATCCTGCGCCA TERM 3783 2794812 - 2794779 - G 82 -8 -4.51699 | opp_overlap 2794781 2794804 2794805, overlap 2794780 2794781 AGAATGATGATAAAA GGCGCGGCTGCCAG CATTAT CCAGCAGCCGCGTT TGGTTAACAGGCGAG TERM 3784 2794811 - 2794780 - G 80 -11.5 -3.29935 | opp_overlap 2794781 2794804 2794805, overlap 2794779 2794781 GAATGATGATAAAAG GCGCGGCTGCCAG CATTAT CCAGCAGCCGCGT TTGGTTAACAGGCGA TERM 3785 2794810 - 2794781 - G 90 -15 -2.57238 | opp_overlap 2794781 2794804 2794805, overlap 2794780 2794779 AATGATGATAAAAGG CGCGGCTGCCAG CATTAT CCAGCAGCCGCG TTTGGTTAACAGGCG TERM 3786 2794781 - 2794810 + g 86 -10.6 -3.90112 | opp_overlap 2794780 2794779 2794781, overlap 2794804 2794805 AATGATGATAAAAGG CGCGGCTGCCAG CATTAT CCAGCAGCCGCG TTTGGTTAACAGGCG yfhM 2799793 - 2794832 - | lipoprotein YfhM precursor TERM 3787 2795107 - 2795117 + g 72 -6.8 -4.19238 | overlap 2795091 2795090 TGGCGCTGCCGTTCG CCAG ATT CTGG TTTTCCAGTTCCAGC TERM 3788 2795817 - 2795830 + g 84 -8.1 -4.72272 | CAGATTTCACGCAGC GCACC CAGT GGTGC TTTTTGCTGACGGGC TERM 3789 2797369 - 2797327 - G 74 -10.9 -3.27408 | gap 2, overlap 2797325 GCGTACTTAAATACA GATCATGACGATTCCAGGT TTTATCG ACC-GGAATCGTCA-GATC CAGCCCTTGAGCCGG TERM 3790 2798727 - 2798747 + g 79 -3.9 -5.09245 | GTCCGACCGTTTTTA CGCGCCA GCAGTAA TGCCGCG TTTTTATCATTTTCC sseA 2800000 - 2800845 + | 3-mercaptopyruvate sulfurtransferase TERM 3791 2800854 - 2800897 + T 100 -18.4 -2.90194 | opp_overlap 2800846 2800861 2800868, overlap 2800857 2800861 2800868 AAAATAAGCTTTTTA CAGGCAATAAAAAACCGCCG AATC TGGCGGTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 3792 2800857 - 2800894 + T 100 -20.9 -2.69964 | opp_overlap 2800846 2800861 2800868, overlap 2800854 2800861 2800868 ATAAGCTTTTTACAG GCAATAAAAAACCGCCG AATC TGGCGGTTTTTTATTGC TGGTCTGGTTCGCGG TERM 3793 2800861 - 2800890 + T 95 -14.5 -3.26433 | opp_overlap 2800846 2800861 2800868, overlap 2800857 2800854 2800868 GCTTTTTACAGGCAA TAAAAAACCGCCG AATC TGGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3794 2800890 - 2800861 - T 87 -13.8 -3.12351 | opp_overlap 2800861 2800857 2800854 2800868, overlap 2800846 2800868 GCTTTTTACAGGCAA TAAAAAACCGCC GAATCT GGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3795 2800883 - 2800868 - T 100 -7.5 -5.49234 | opp_overlap 2800861 2800857 2800854 2800868, overlap 2800861 ACAGGCAATAAAAAA CCGCC GAATCT GGCGG TTTTTTATTGCTGGT TERM 3796 2800868 - 2800883 + T 100 -8.2 -5.52023 | opp_overlap 2800868 2800861, overlap 2800861 2800857 2800854 ACAGGCAATAAAAAA CCGCCG AATC TGGCGG TTTTTTATTGCTGGT TERM 3797 2800975 - 2801006 + T 80 -9 -4.10144 | opp_overlap 2800965 2800978, overlap 2800978 CACAATACTCGCCAG TAACTCTCTTTT TGTCAAGT AAAAGAGAGTTA TTATTGTTCTGTTAG TERM 3798 2801263 - 2801249 - T 91 -11.4 -4.10744 | CGAGGTAAATAATAA CCGGAG TCT CTCCGG CAACAATTTACTGGT TERM 3799 2801312 - 2801335 + T 100 -12.4 -4.3208 | opp_overlap 2801307, overlap 2801314 CAGCAAGTAAGCCCG AATGCCGCCC TTTG GGGCGGCATG TTTTAAATTATCCGG TERM 3800 2801314 - 2801333 + T 100 -15 -3.76167 | opp_overlap 2801307, overlap 2801312 GCAAGTAAGCCCGAA TGCCGCCC TTTG GGGCGGCA TGTTTTAAATTATCC sseB 2802114 - 2801338 - | enhanced serine sensitivity protein SseB TERM 3801 2801843 - 2801872 + g 83 -13 -3.02263 | opp_overlap 2801840, overlap 2801847 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCGCCTGT TERM 3802 2802215 - 2802250 + r 88 -11.8 -3.51976 | opp_overlap 2802227, overlap 2802211 2802218 GATTTTCGCAATTTG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA TTAGTTTACGCCGTT TERM 3803 2802218 - 2802247 + r 86 -13.5 -2.59569 | opp_overlap 2802227, overlap 2802215 2802211 TTTCGCAATTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATATTAGTTTACGCC pepB 2803539 - 2802256 - | aminopeptidase B TERM 3804 2803571 - 2803592 + r 85 -11.5 -3.56704 | opp_overlap 2803571, overlap 2803567 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTTACTCGGCC TERM 3805 2803592 - 2803571 - R 100 -13.7 -4.4261 | opp_overlap 2803567 2803571 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTTACTCGGCC yfhJ 2803798 - 2803598 - | hypothetical protein fdx 2804145 - 2803810 - | ferredoxin, 2Fe-2S hscA 2805997 - 2804147 - | chaperone protein HscA TERM 3806 2805478 - 2805490 + g 76 -9.1 -3.74693 | CATGCAACCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2806529 - 2806014 - | co-chaperone HscB TERM 3807 2806609 - 2806583 - R 89 -8.7 -4.6951 | gap 1, opp_overlap 2806583 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2806954 - 2806625 - | iron-sulfur cluster assembly protein iscU 2807351 - 2806965 - | scaffold protein iscS 2808617 - 2807379 - | cysteine desulfurase iscR 2809193 - 2808705 - | DNA-binding transcriptional regulator IscR TERM 3808 2809089 - 2809079 - G 75 -6.8 -4.38927 | GTTCCAGATAAGAAA GGGA AAT TCCC TGACGTTCGGAAATA TERM 3809 2809216 - 2809228 + r 100 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3810 2809278 - 2809325 + r 72 -8.6 -3.6715 | overlap 2809280 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 3811 2809280 - 2809323 + r 83 -11.2 -3.4149 | overlap 2809278 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT yfhQ 2810203 - 2809463 - | putative ATP synthase beta subunit TERM 3812 2810090 - 2810121 + g 70 -6 -4.25256 | gap 1, overlap 2810090 GTCTGGTTTCACTAG T-GGATTAACCAGCC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 3813 2810340 - 2810368 + G 79 -12.3 -3.02166 | opp_overlap 2810341, overlap 2810336 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 3814 2810367 - 2810341 - g 87 -13.6 -3.04263 | opp_overlap 2810340 2810336 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2810322 - 2811125 + | inositol monophosphatase UTI89_C2856 2811243 - 2812124 + | hypothetical protein csiE 2812315 - 2813595 + | stationary phase inducible protein CsiE hcaT 2814726 - 2813587 - | putative 3-phenylpropionic acid transporter TERM 3815 2813867 - 2813851 - G 70 -10.1 -3.23216 | opp_overlap 2813851 2813854 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC TERM 3816 2814132 - 2814109 - G 72 -7.4 -3.9009 | overlap 2814110 2814131 AACGCAGGCCAGAAA GCGCCAGTTC TGGC GAACCAACGC CAACCACGCAGACCA UTI89_C2859 2814903 - 2814760 - | hypothetical protein UTI89_C2860 2814946 - 2815098 + | hypothetical protein UTI89_C2862 2815613 - 2815305 - | hypothetical protein yphA 2815050 - 2815517 + | hypothetical protein TERM 3817 2815555 - 2815524 - GT 77 -10 -3.44848 | opp_overlap 2815534, overlap 2815522 2815525 2815542 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACCGCTCCAACACC TERM 3818 2815554 - 2815525 - GT 86 -13.5 -2.66695 | opp_overlap 2815534, overlap 2815524 2815522 2815542 GGCGTTAGGAAAGAT GCCGGATGCGGCG TAAA CGCCTTATCCGGC CTACCGCTCCAACAC yphB 2816549 - 2815677 - | hypothetical protein gutB 2817655 - 2816561 - | sorbitol dehydrogenase TERM 3819 2817254 - 2817265 + g 75 -7.2 -4.41047 | GCCGTCACGCTGCCA GCCG TAAG CGGC TTTTCCTTCACCGGT yphD 2818686 - 2817688 - | ABC transporter permease TERM 3820 2818435 - 2818424 - G 76 -3.6 -4.92385 | CACACTGAAACAAAA GCCA CCAT CGGC CCAACGCTGACATCA yphE 2820222 - 2818711 - | ABC transporter ATP-binding protein TERM 3821 2819175 - 2819188 + g 70 -5.2 -4.41548 | overlap 2819162 ACCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAG yphF 2821228 - 2820245 - | ABC transporter periplasmic-binding protein TERM 3822 2820781 - 2820793 + g 77 -3.3 -5.03145 | TAAAATAATCGGCGG CTGCG TTA CCCAG TTTTTTACCAAATTC yphG 2824699 - 2821325 - | hypothetical protein TERM 3823 2823002 - 2823014 + g 95 -9.1 -5.06414 | AATCAAACTCGCCTG TCCGC ACT GCGGA TTTTTGTTCAGCGCA yphH 2824724 - 2825917 + | hypothetical protein TERM 3824 2825937 - 2825954 + T 100 -11.3 -5.01732 | opp_overlap 2825937 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT TERM 3825 2825954 - 2825937 - T 91 -11.3 -4.00066 | opp_overlap 2825937 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT glyA 2827240 - 2825981 - | serine hydroxymethyltransferase TERM 3826 2826720 - 2826736 + g 70 -5.1 -4.40333 | opp_overlap 2826720 TATGCAGAGAAGCCA CCGATAA TCA TTTTCGG TTTGTGTTCTTTGGC TERM 3827 2828004 - 2827988 - g 72 -5.7 -4.50661 | opp_overlap 2827990, overlap 2827990 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GTTGGGAAGGTACTC TERM 3828 2828728 - 2828714 - g 70 -5 -4.49756 | opp_overlap 2828714 CGTGAAACAGGAAAA CATTCA TTA CGAATG CTTTGGCCCGCATAA hmpA 2827563 - 2828753 + | nitric oxide dioxygenase glnB 2829136 - 2828798 - | nitrogen regulatory protein P-II 1 yfhA 2830570 - 2829197 - | hypothetical protein yfhG 2831240 - 2830521 - | hypothetical protein UTI89_C2875 2831177 - 2831332 + | hypothetical protein yfhK 2832889 - 2831399 - | putative sensor-like histidine kinase YfhK TERM 3829 2832029 - 2832039 + g 93 -8.2 -4.90266 | overlap 2832014 GCCCTCGCGCATACT CGCC AGT GGCG TTTTTAATTCATGAG TERM 3830 2832914 - 2832884 - G 100 -16.3 -2.91681 | opp_overlap 2832887 2832891, overlap 2832887 2832891 GGGGAAGTTCAGATA CAACAAAGCCGGG AATTA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3831 2832911 - 2832887 - G 100 -15.8 -3.60412 | opp_overlap 2832887 2832891, overlap 2832884 2832891 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3832 2832887 - 2832911 + g 100 -15.8 -3.32844 | opp_overlap 2832887 2832884 2832891, overlap 2832891 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3833 2832907 - 2832891 - R 90 -10.8 -4.42974 | opp_overlap 2832887 2832891, overlap 2832887 2832884 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3834 2832891 - 2832907 + r 90 -10.8 -4.32177 | opp_overlap 2832891 2832887 2832884, overlap 2832887 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3835 2833323 - 2833306 - R 100 -8.4 -5.51046 | TAAAGACACAAAAAA GCTCCC GAAGTT GGGAGC TCATAATAGCGGTTG purL 2837445 - 2833402 - | phosphoribosylformylglycinamidine synthase TERM 3836 2836093 - 2836104 + g 74 -2.2 -5.14163 | overlap 2836087 2836086 CAGCTCTTCGCCATT GTGG CTGT TCAC TTTTTCTTCATAAGT TERM 3837 2837404 - 2837393 - G 75 -4.4 -4.86731 | TGCGTGGAAATAAAA TCAC CATC GTGA ATTAGCAACGCGTGC TERM 3838 2837567 - 2837557 - g 79 -2.6 -5.1848 | opp_overlap 2837557 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG yfhD 2837548 - 2839104 + | putative transglycosylase yfhC 2839637 - 2839101 - | tRNA-specific adenosine deaminase UTI89_C2880 2840297 - 2839662 - | hypothetical protein TERM 3839 2839928 - 2839913 - G 74 -6.1 -4.46112 | overlap 2839925 GCGTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 3840 2840293 - 2840271 - G 86 -6.2 -5.16572 | overlap 2840274 2840276 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT TERM 3841 2841243 - 2841211 - g 72 -7.7 -3.94877 | opp_overlap 2841229 ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCGCAGGGAATGTTA yfhH 2840506 - 2841354 + | putative DNA-binding transcriptional regulator yfhL 2841410 - 2841670 + | putative ferredoxin-like protein YfhL TERM 3842 2841844 - 2841815 - T 100 -13.6 -3.78022 | opp_overlap 2841815 TTTATAGTTATTAAA GGCGCGTCCGAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT UTI89_C2883 2842093 - 2841941 - | hypothetical protein TERM 3843 2842348 - 2842298 - R 93 -13.5 -3.15405 | opp_overlap 2842305 2842311, overlap 2842305 TGCACAAAATTAAAG TTAAAAAGTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTACTTTATAA AGAGAACGGTATTAT TERM 3844 2842341 - 2842305 - R 100 -11.6 -4.83759 | opp_overlap 2842305 2842311, overlap 2842298 AATTAAAGTTAAAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTATAAAGAGAACG TERM 3845 2842305 - 2842341 + r 85 -10.9 -3.85698 | opp_overlap 2842298 2842305, overlap 2842311 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTATAAAGAGAACG acpS 2842745 - 2842365 - | 4'-phosphopantetheinyl transferase pdxJ 2843491 - 2842745 - | pyridoxal phosphate biosynthetic protein PdxJ recO 2844216 - 2843488 - | DNA repair protein RecO TERM 3846 2843639 - 2843649 + g 72 -6.8 -4.21275 | overlap 2843621 2843620 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2845133 - 2844228 - | GTP-binding protein Era TERM 3847 2844572 - 2844562 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC TERM 3848 2845041 - 2845052 + g 70 -5.8 -4.16284 | GGTGATGGAGATCTT CTGC CCCA GCAG TTTATTCAACAATGT rnc 2845810 - 2845130 - | ribonuclease III UTI89_C2889 2845868 - 2846026 + | hypothetical protein TERM 3849 2846063 - 2846031 - T 100 -21.5 -4.07877 | opp_overlap 2846019 TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGGCTATT lepB 2847051 - 2846077 - | lsignal peptidase I TERM 3850 2846613 - 2846629 + g 76 -9.5 -3.76373 | GCAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2848866 - 2847067 - | GTP-binding protein LepA TERM 3851 2847165 - 2847178 + g 74 -2.3 -5.07486 | overlap 2847163 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGACTG TERM 3852 2849071 - 2849054 - R 93 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2849543 - 2849064 - | SoxR reducing system protein RseC rseB 2850496 - 2849540 - | periplasmic negative regulator of sigmaE TERM 3853 2850437 - 2850410 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 2851146 - 2850496 - | anti-RNA polymerase sigma factor SigE TERM 3854 2850872 - 2850884 + g 78 -7.7 -4.43189 | opp_overlap 2850880, overlap 2850880 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTCTGCCATTGAT rpoE 2851787 - 2851179 - | RNA polymerase sigma factor RpoE TERM 3855 2852046 - 2852063 + H 71 -8.3 -3.47361 | overlap 2852044 AACTTCTCGTTTTCT CGCCGCC CTGA GGCAGCG TGTTTAGTCACTGTA TERM 3856 2852185 - 2852163 - g 84 -3.5 -5.20222 | opp_overlap 2852184 ATTAAACAAAGAAAA TGAATACTC TCCCT GAACATTCA TGTGACGTGTTGATT TERM 3857 2852309 - 2852329 + G 72 -8.9 -3.73775 | overlap 2852312 TCAACATTTTATGCC CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACTGAC nadB 2852162 - 2853784 + | L-aspartate oxidase TERM 3858 2853801 - 2853788 - T 74 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA yfiC 2854626 - 2853769 - | hypothetical protein TERM 3859 2853885 - 2853859 - G 88 -12.4 -3.58269 | overlap 2853883 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 3860 2854544 - 2854531 - G 77 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 3861 2855075 - 2855064 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT UTI89_C2898 2854638 - 2855972 + | ATP-dependent RNA helicase SrmB TERM 3862 2855976 - 2856001 + T 100 -15.5 -4.82901 | opp_overlap 2855974 2855967 ACAGAAGAGTAATCT CAATGCCGGGT TTAA GCCCGGCATTG TTTTTATCCCGGCAA yfiE 2856931 - 2856005 - | transcriptional regulator YfiE TERM 3863 2856203 - 2856171 - G 70 -6.1 -4.15565 | TTTACCACCGCAAAA CGCGGCAGGTAACTG ACT CCGATATTTGCCGCG ACACAACGCTTGATG TERM 3864 2856688 - 2856698 + g 79 -2.4 -5.26875 | TAAGTTCATAGATGT GCGG CAG CAGC TTTTTTCCTTCGCGG TERM 3865 2856800 - 2856814 + g 70 -5 -4.57569 | overlap 2856803 AAAAGTCACCGTCGA TTGTGT GCA GCACAA TTTTTGCGAAGCTCG TERM 3866 2856835 - 2856815 - G 80 -11.3 -3.40403 | TTGTGTGCAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC TERM 3867 2856917 - 2856934 + g 91 -2.7 -5.52909 | opp_overlap 2856918, overlap 2856918 2856933 GAAAATATCGAATTT AGAATGT AAAA ACATTCA TTTTTTTAAATGTTC yfiK 2856989 - 2857576 + | neutral amino-acid efflux protein TERM 3868 2857553 - 2857565 + T 73 -4.8 -4.66537 | CTGTTGCTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAACGAA TERM 3869 2857586 - 2857609 + T 100 -16.8 -3.22884 | opp_overlap 2857586, overlap 2857578 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 3870 2857609 - 2857586 - T 100 -16.8 -5.65513 | opp_overlap 2857586 2857578 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC yfiD 2858015 - 2857632 - | autonomous glycyl radical cofactor GrcA TERM 3871 2858159 - 2858143 - H 79 -3.7 -5.24551 | TTAAATCAACAAAAA CCACA TATCAAG TGTGG TCACAAATGGATTTT TERM 3872 2858782 - 2858799 + G 88 -5.5 -5.18726 | AGCCTCATAAATCAG CATCGCG AAGG CGTGGTG TTTTTGTTGTGGGGA ung 2858320 - 2859009 + | uracil-DNA glycosylase TERM 3873 2859050 - 2859023 - T 100 -13.4 -4.0896 | opp_overlap 2859021 2859024 2859047 2859049, overlap 2859024 AAATTTGCGGGAAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 3874 2859024 - 2859049 + T 89 -14.7 -3.0169 | opp_overlap 2859023 2859024, overlap 2859021 2859047 AATTTGCGGGAAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 3875 2859049 - 2859024 - T 100 -16.9 -3.04894 | opp_overlap 2859024 2859021 2859047, overlap 2859023 AATTTGCGGGAAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT yfiF 2860169 - 2859057 - | putative methyltransferase TERM 3876 2859893 - 2859881 - GT 73 -9.1 -3.53012 | opp_overlap 2859861 CCGGCGCGCGGGAAA CCGTG CGC CACGG CGAATCTTCCCACTT UTI89_C2904 2860287 - 2860084 - | hypothetical protein trxC 2860301 - 2860720 + | thioredoxin 2 TERM 3877 2860727 - 2860747 + F 100 -14.7 -4.50976 | TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 3878 2860760 - 2860770 + G 71 -2.4 -5.02074 | overlap 2860768 CCGTTTTCTCCTCTG CGAC AAT GGCG TTTTTTCGACGCTCC TERM 3879 2860831 - 2860847 + G 72 -4.3 -4.63218 | overlap 2860826 2860822 2860834 CGCGCCGAGCGTATT GCGCGTG CAA CACGTCC TTTTCTTGCCCGCGG TERM 3880 2861002 - 2860986 - g 72 -10.1 -3.3782 | opp_overlap 2860985 2860983 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA yfiP 2860738 - 2861487 + | hypothetical protein yfiQ 2861519 - 2864179 + | hypothetical protein pssA 2864290 - 2865648 + | phosphatidylserine synthase TERM 3881 2865655 - 2865671 + F 93 -9.4 -5.04249 | opp_overlap 2865655 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 3882 2865671 - 2865655 - f 75 -9.4 -3.51032 | opp_overlap 2865655 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG yfiM 2865673 - 2866017 + | hypothetical protein kgtP 2867405 - 2866014 - | alpha-ketoglutarate transporter TERM 3883 2867631 - 2867614 - g 78 -12.7 -2.89881 | opp_overlap 2867614, overlap 2867616 CAGGCATGCCAGACA CAGCGCC GTCA GGCGCTG TTGTTTCATCCCTTC TERM 3884 2867614 - 2867631 + G 95 -12.7 -4.02571 | opp_overlap 2867614 2867616 CAGGCATGCCAGACA CAGCGCC GTCA GGCGCTG TTGTTTCATCCCTTC UTI89_C2911 2867421 - 2867681 + | hypothetical protein UTI89_C2913 2868621 - 2868217 - | transposase UTI89_C2912 2867822 - 2868346 + | hypothetical protein UTI89_C2914 2868472 - 2868840 + | hypothetical protein TERM 3885 2868869 - 2868924 + Tr 77 -3.2 -5.22104 | gap 1, opp_overlap 2868869, overlap 2868869 2868870 2868872 GACAGTTTCAGTTAA C-CGGCTTTTTGATACTCAGTCCGGTA TTC TACCGGGCTGAGTCCCCCAAGACTGAG TTTTATTCTTTTTTG UTI89_C2915 2869587 - 2868865 - | putative transposase InsK for insertion sequence element IS150 TERM 3886 2869411 - 2869423 + g 73 -9.1 -3.6761 | overlap 2869409 GAGTCCCATATTTCC CCGGT AAG ACCGG TATTTCTTCAGGCGC TERM 3887 2869724 - 2869734 + H 77 -2.4 -5.40072 | overlap 2869719 TTCGTTTTTTCTCCA GCTC CTG GCGC TTTTTTTCCAGAAGA TERM 3888 2870304 - 2870327 + H 78 -11 -3.26998 | opp_overlap 2870306, overlap 2870298 2870306 CGCACCAACGCAAAA AAGCCCAGTC TTCC GACTGGGCTC TTCGCTTAATTTGAT TERM 3889 2870306 - 2870325 + H 93 -13.6 -3.19205 | opp_overlap 2870306, overlap 2870304 2870298 CACCAACGCAAAAAA GCCCAGTC TTCC GACTGGGC TCTTCGCTTAATTTG TERM 3890 2870325 - 2870306 - H 100 -13.6 -5.17576 | opp_overlap 2870304 2870298 2870306 CACCAACGCAAAAAA GCCCAGTC TTCC GACTGGGC TCTTCGCTTAATTTG TERM 3891 2871666 - 2871677 + H 71 -4.4 -4.7254 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTAATAAACAGT TERM 3892 2872967 - 2872979 + H 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3893 2873521 - 2873545 + H 72 -8 -3.93061 | gap 1, opp_overlap 2873527 AAAATTTGAGAGACT CAC-GAACAAC TCTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 3894 2873747 - 2873760 + H 74 -6.7 -4.41177 | overlap 2873712 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC UTI89_C2924 2875418 - 2875666 + | hypothetical protein TERM 3895 2875776 - 2875792 + T 89 -9.4 -4.56607 | opp_overlap 2875776, overlap 2875771 ACTTATAGACAAAAA CGAGCC CCGAA GGCTCG TTTTATCATTACTGG TERM 3896 2875792 - 2875776 - T 93 -10.1 -5.04597 | opp_overlap 2875776 2875771 ACTTATAGACAAAAA CGAGCCC CGA AGGCTCG TTTTATCATTACTGG clpB 2878386 - 2875801 - | protein disaggregation chaperone TERM 3897 2877570 - 2877550 - G 72 -7.5 -3.86822 | opp_overlap 2877550 TAATTCGTCGATAAA CAGGATGAC GTT GCCTTCCTG TTTGGCAAGATCGTT yfiH 2879235 - 2878504 - | hypothetical protein rluD 2880212 - 2879232 - | 23S rRNA pseudouridine synthase D TERM 3898 2880247 - 2880257 + H 72 -8.2 -3.8766 | ATCGTTGGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC UTI89_C2928 2880347 - 2881084 + | outer membrane protein assembly complex subunit YfiO TERM 3899 2881128 - 2881100 - f 93 -12.5 -3.44991 | opp_overlap 2881105, overlap 2881105 CAGAAACCTGAAACA CAAAACGGCAGCC TTG AGCTGCCGTTTTT TTATTCTGTTAGTTG TERM 3900 2881123 - 2881105 - f 100 -12.4 -4.79451 | opp_overlap 2881105, overlap 2881100 ACCTGAAACACAAAA CGGCAGCC TTG AGCTGCCG TTTTTTTATTCTGTT TERM 3901 2881105 - 2881123 + F 100 -11.7 -5.94214 | opp_overlap 2881100 2881105 ACCTGAAACACAAAA CGGCAGC CTTGA GCTGCCG TTTTTTTATTCTGTT UTI89_C2929 2881113 - 2881319 + | hypothetical protein UTI89_C2930 2881809 - 2881273 - | hypothetical protein TERM 3902 2881648 - 2881615 - Gg 72 -6.7 -4.1822 | gap 1, overlap 2881616 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG UTI89_C2931 2881354 - 2881695 + | translation inhibitor protein RaiA TERM 3903 2881721 - 2881736 + gF 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC TERM 3904 2881895 - 2881915 + FH 100 -11.8 -5.5112 | opp_overlap 2881895 GAAGACGAACAATAA GGCCTCCC AAATC GGGGGGCC TTTTTTATTGATAAC TERM 3905 2881915 - 2881895 - fH 82 -10.3 -4.03167 | opp_overlap 2881895 GAAGACGAACAATAA GGCCTCCCA AAT CGGGGGGCC TTTTTTATTGATAAC pheA 2881945 - 2883105 + | bifunctional chorismate mutase/prephenate dehydratase TERM 3906 2883106 - 2883147 + T 72 -9.5 -3.17219 | opp_overlap 2883113, overlap 2883109 2883110 2883113 GTTGATCCAACCTGA TGAAAAAGTGCCGGATGAT GTGA ATCATCCGGCACTGGATTA TTACTGGCGATTGTC TERM 3907 2883109 - 2883144 + T 77 -9 -3.72592 | opp_overlap 2883113, overlap 2883106 2883110 2883113 GATCCAACCTGATGA AAAAGTGCCGGATGAT GTGA ATCATCCGGCACTGGA TTATTACTGGCGATT TERM 3908 2883110 - 2883143 + T 82 -12.5 -2.83073 | opp_overlap 2883113, overlap 2883109 2883106 2883113 ATCCAACCTGATGAA AAAGTGCCGGATGAT GTGA ATCATCCGGCACTGG ATTATTACTGGCGAT TERM 3909 2883140 - 2883113 - T 100 -18.6 -4.74801 | opp_overlap 2883110 2883109 2883106 2883113 CAACCTGATGAAAAA GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC TERM 3910 2883113 - 2883140 + T 100 -18.6 -2.67428 | opp_overlap 2883113, overlap 2883110 2883109 2883106 CAACCTGATGAAAAA GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC tyrA 2884269 - 2883148 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 3911 2883443 - 2883457 + g 71 -2.8 -4.77165 | GAGAGCGCCAGTAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGG aroF 2885419 - 2884280 - | phospho-2-dehydro-3-deoxyheptonate aldolase yfiL 2885542 - 2885925 + | hypothetical protein yfiR 2886074 - 2886592 + | hypothetical protein yfiN 2886582 - 2887808 + | hypothetical protein yfiB 2887824 - 2888306 + | putative outer membrane lipoprotein TERM 3912 2888352 - 2888331 - T 100 -11.5 -5.82281 | opp_overlap 2888331 2888349 2888351 AAACAGACAAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 2888730 - 2888383 - | 50S ribosomal protein L19 trmD 2889539 - 2888772 - | tRNA (guanine-N(1)-)-methyltransferase rimM 2890127 - 2889570 - | 16S rRNA-processing protein rpsP 2890385 - 2890137 - | 30S ribosomal protein S16 TERM 3913 2890441 - 2890409 - R 90 -9.2 -4.63218 | gap 1, opp_overlap 2890412, overlap 2890412 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 3914 2890439 - 2890412 - R 95 -12 -4.43307 | opp_overlap 2890412, overlap 2890409 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 2891883 - 2890522 - | signal recognition particle protein TERM 3915 2892144 - 2892130 - g 85 -2.7 -5.40072 | overlap 2892132 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC ypjD 2891975 - 2892841 + | hypothetical protein yfjD 2892952 - 2894148 + | hypothetical protein TERM 3916 2894152 - 2894183 + TF 86 -10.8 -4.15044 | opp_overlap 2894155, overlap 2894155 GTGGCGGAGTAACGA AAACGGCCCGGCAT TCGC ATGCTGGGCCGTGA TTTATTACGAAAGCA TERM 3917 2894180 - 2894155 - Tf 100 -14.7 -4.45544 | opp_overlap 2894152 2894155 GCGGAGTAACGAAAA CGGCCCGGCAT TCGC ATGCTGGGCCG TGATTTATTACGAAA TERM 3918 2894155 - 2894180 + TF 100 -16.9 -3.10244 | opp_overlap 2894155, overlap 2894152 GCGGAGTAACGAAAA CGGCCCGGCAT TCGC ATGCTGGGCCG TGATTTATTACGAAA grpE 2894796 - 2894203 - | heat shock protein GrpE yfjC 2895044 - 2894793 - | hypothetical protein UTI89_C2946 2894170 - 2894922 + | hypothetical protein TERM 3919 2895156 - 2895173 + GH 70 -9.8 -2.92293 | opp_overlap 2895145, overlap 2895151 AATATGCTGGGCGCG GCGCGC ACGCTC GCGCGC TATGATATTAAAGTT ppnK 2894919 - 2895797 + | inorganic polyphosphate/ATP-NAD kinase TERM 3920 2895888 - 2895878 - fH 70 -5.4 -4.39166 | TTTCATACAGGAAAA CAAC TAT GTTG GCACAACTGACCATC TERM 3921 2897478 - 2897455 - g 79 -2.2 -5.24129 | TCCCTGGATAAAAAA GCGCGGTTAC AAGA GTTGGCGCGC CTGCTTGGTGGCAGT recN 2895883 - 2897544 + | recombination and repair protein smpA 2897693 - 2898034 + | hypothetical protein TERM 3922 2898054 - 2898093 + T 95 -12.4 -3.70444 | gap 1, opp_overlap 2898066, overlap 2898066 AAAGTTGCTCTCAAA GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC TGTTATTTATTCGCT TERM 3923 2898082 - 2898066 - T 100 -12.3 -5.10077 | opp_overlap 2898054 2898066 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT TERM 3924 2898066 - 2898082 + T 100 -12.3 -5.46276 | opp_overlap 2898066, overlap 2898054 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT yfjF 2898404 - 2898096 - | hypothetical protein TERM 3925 2898212 - 2898230 + gT 74 -3 -4.96773 | overlap 2898214 CGCTGAGTTTTGCCG GACGGC TGTAAAT GCCGAC TTTGTTTTTAGTTAA yfjG 2898852 - 2898376 - | hypothetical protein TERM 3926 2899375 - 2899363 - g 70 -5.5 -4.35524 | GGTGCAAAGTGAAAA TCGGC GTC GCCAA AGGTAAGAAACAGCA smpB 2898984 - 2899466 + | SsrA-binding protein TERM 3927 2899780 - 2899765 - T 74 -3.2 -5.08011 | overlap 2899767 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC UTI89_C2955 2900299 - 2900045 - | hypothetical protein TERM 3928 2900175 - 2900190 + g 100 -11.8 -5.39221 | opp_overlap 2900175 CGAAGTGAAATGAAA GCCCGC TGAT GCGGGC TTTTTTGCTTCTTCT TERM 3929 2900190 - 2900175 - G 91 -11.8 -4.10672 | opp_overlap 2900175 CGAAGTGAAATGAAA GCCCGC TGAT GCGGGC TTTTTTGCTTCTTCT UTI89_C2956 2900429 - 2900626 + | hypothetical protein TERM 3930 2900771 - 2900760 - g 93 -5.8 -5.19879 | TGGTAAATATAAAAA CTGG ATCG CCAG AGTGAAAAAGTTAAT UTI89_C2957 2900623 - 2901411 + | hypothetical protein TERM 3931 2901444 - 2901494 + T 93 -11.9 -4.1043 | gap 1, opp_overlap 2901476 TTACAGGATTAGGTT TGCGGCCGTGCCAGCAGGAC GAGCATGAAAAA GGCC-GCTGGCACGGCCGGA TTTGTCATCTTTGCC TERM 3932 2901491 - 2901476 - T 86 -8.2 -4.78107 | opp_overlap 2901444 GACGAGCATGAAAAA GGCCGC TGGC ACGGCC GGATTTGTCATCTTT UTI89_C2958 2901792 - 2901499 - | hypothetical protein TERM 3933 2901947 - 2901928 - R 70 -5.6 -4.38154 | opp_overlap 2901928 AGACTTTGCACAAAA GAGCCAAC TATC GCGGGCTC TCTCTCATCATGTGC TERM 3934 2902028 - 2902010 - R 77 -5.2 -4.98531 | overlap 2902019 2902021 TTCCGAAATCAAAAA CCGGGAGA ATA TCTCACAG GAGACATAGCACCTT UTI89_C2959 2902776 - 2902003 - | prophage CP-933H unknown protein TERM 3935 2902046 - 2902064 + g 70 -3.9 -4.70772 | GACATAGCACCTTTC TTTCTGA GATCA TCAGGAA TTTTCTTACCTATAT TERM 3936 2903016 - 2902999 - H 72 -8.4 -3.64685 | opp_overlap 2902999 AAAATCCCTTAAGAA CCAGCC TATTAT GGCTGG TTTTTTTATGATTGT TERM 3937 2902999 - 2903016 + H 100 -8.4 -5.73339 | opp_overlap 2902999 AAAATCCCTTAAGAA CCAGCC TATTAT GGCTGG TTTTTTTATGATTGT TERM 3938 2903526 - 2903559 + H 77 -9.7 -3.66378 | gap 1, overlap 2903527 AAGTTCACCAGCCAG TCGTA-GCACGTCCTT GCA AACGACGTGCCTACGG TTTCAATCACCTCTC TERM 3939 2903527 - 2903558 + H 74 -11 -2.79505 | gap 1, overlap 2903526 AGTTCACCAGCCAGT CGTA-GCACGTCCTT GCA AACGACGTGCCTACG GTTTCAATCACCTCT TERM 3940 2903707 - 2903720 + H 74 -2.3 -5.30155 | opp_overlap 2903703, overlap 2903703 2903708 AAGCCCTAAAACGTC AGCGT TCAG ACGCG TTTTTTACTTAATCG UTI89_C2960 2903828 - 2905717 + | hypothetical protein TERM 3941 2905763 - 2905740 - f 75 -11 -2.93712 | opp_overlap 2905734 2905732, overlap 2905732 2905735 2905733 AATAAAATGATTATA GTGGCCTTAC ATTA GTAAGGCCGC TACTCACTATTAAAT TERM 3942 2906825 - 2906870 + G 72 -10.6 -3.06796 | gap 1, overlap 2906827 AATTCGTGGCTGGAT TATCTGGACGCACTGGAACTG GTCGA TACTTCCTGTGCG-CCAGATA TTGAATGGCCTACGC yfdK 2906465 - 2906908 + | hypothetical protein tfaE 2907482 - 2906880 - | lambdoid prophage e14 tail fiber assembly protein-like protein ycfK 2908225 - 2907482 - | hypothetical protein TERM 3943 2907571 - 2907593 + g 89 -13.6 -3.25282 | overlap 2907567 CCGACACGGACTGGT CATTACCGTT GCT AACGGTAATG TTACTACTGGTTGAT TERM 3944 2908177 - 2908203 + g 86 -9.4 -4.41353 | overlap 2908199 TAAAACCGTTCTTAC CCGCGCCGAA CTTATCC TTCTGCGCGG TTTTCGTGTCTATAC UTI89_C2964 2908813 - 2908229 - | bacteriophage V tail protein UTI89_C2965 2909862 - 2908804 - | bacteriophage V tail protein TERM 3945 2909735 - 2909713 - G 70 -10.6 -2.74461 | opp_overlap 2909712, overlap 2909712 GATGTACCCGTAAAC CGTATGCAGC GCC GCCGCATACA CCTTTGCCCGCACGT UTI89_C2966 2910274 - 2909849 - | bacteriophage V tail protein UTI89_C2967 2910822 - 2910274 - | bacteriophage V tail protein UTI89_C2968 2911901 - 2910822 - | bacteriophage V tail protein UTI89_C2969 2913253 - 2911898 - | bacteriophage V tail/DNA circulation protein TERM 3946 2912428 - 2912442 + g 70 -5.6 -4.37534 | overlap 2912420 2912429 CGTTACGCTGCTGCG TCGCCG TGG CGGTGG TTTTACTGTCCGTTT TERM 3947 2913263 - 2913248 - G 100 -9 -5.36441 | opp_overlap 2913247 TCCGTACATAAAAAA TCCCAC CGGA GTGGGA CTCATTAACAGATTA UTI89_C2970 2915122 - 2913287 - | bacteriophage V tail protein TERM 3948 2914690 - 2914704 + g 88 -2.1 -5.55698 | gap 1, opp_overlap 2914686, overlap 2914687 2914686 TTGCGGCAAACTCGG CAGCCG CTTC CGG-TG TTTTTTTCAGTTGTA TERM 3949 2915231 - 2915213 - R 95 -14.6 -3.22091 | ATTCGAAGGGATTAA TGCGCCAG TAG CTGGCGCA GTCAAAGAAGCGATC UTI89_C2971 2915533 - 2915264 - | hypothetical protein UTI89_C2972 2915889 - 2915533 - | hypothetical protein TERM 3950 2915829 - 2915851 + g 73 -11.3 -2.75577 | overlap 2915826 2915825 GCACCTCAATGCCGC CGGTCAGCG ATAGC TGCTGACCG TCAATTTTGAAATAA UTI89_C2973 2917385 - 2915889 - | bacteriophage V tail sheath protein TERM 3951 2916233 - 2916270 + g 78 -5.3 -4.81551 | overlap 2916225 TGGTATGCAGCGTCT CGCTGTCGAGGTAGCTG TTAT CCGCAACCCCGTAAGCG TTTTTCCTGTACGTG TERM 3952 2916552 - 2916572 + g 72 -9.7 -3.29511 | opp_overlap 2916552 GTGCTGCTGGTTAAA CTGGTCACC TGC GGTCACCAG TTCTGACAGCGTGCC TERM 3953 2916572 - 2916552 - G 74 -9.7 -3.53012 | opp_overlap 2916552 GTGCTGCTGGTTAAA CTGGTCACC TGC GGTCACCAG TTCTGACAGCGTGCC UTI89_C2974 2917539 - 2917369 - | hypothetical protein UTI89_C2975 2918108 - 2917548 - | hypothetical protein TERM 3954 2917928 - 2917945 + g 84 -4.1 -5.18371 | CCTCTTTCAGCTCCT GCCAG TAGTCGGT CTGGC TTTTGTTTTCTCCCG UTI89_C2976 2918611 - 2918105 - | hypothetical protein TERM 3955 2918552 - 2918534 - GR 81 -9.5 -3.89881 | ACCAATCGTGACAAA CGCCCGC CGGAC ACGGGCG CGGTTAAAGCGCATC UTI89_C2977 2918996 - 2918586 - | hypothetical protein UTI89_C2979 2919316 - 2918993 - | hypothetical protein UTI89_C2978 2918622 - 2919089 + | hypothetical protein UTI89_C2980 2919519 - 2919319 - | hypothetical protein TERM 3956 2919563 - 2919539 - R 100 -13.6 -3.30124 | gap 1, opp_overlap 2919539, overlap 2919542 CTTCACCCGTCAGAA CAGGGGGCGCG GTTC CGCGCCC-CTG AGTGATTACGCCGCT TERM 3957 2919561 - 2919542 - R 100 -16.4 -2.5294 | opp_overlap 2919539, overlap 2919539 CACCCGTCAGAACAG GGGGCGCG GTTC CGCGCCCC TGAGTGATTACGCCG UTI89_C2981 2920774 - 2919569 - | major capsid protein precursor TERM 3958 2920652 - 2920663 + g 81 -5.8 -4.77438 | overlap 2920645 GGTTTCCACCTGCCC GGCA AGTT TGCC TTTTTCCTGCTCAAT UTI89_C2982 2921475 - 2920789 - | pro-head protease TERM 3959 2920894 - 2920928 + gr 100 -2.7 -5.80817 | overlap 2920895 2920900 TGCTTTGGCCTGGGT ACGGGAGAGTCCGAC ATCAC GCAGGACTCTTTCGA TTTTTTTCTGTTCGG TERM 3960 2921106 - 2921125 + gr 100 -13.6 -3.33261 | opp_overlap 2921106 CGTACCCAATAGAAA GGCCGGTT AACG AACCGGCC TTCATGTGTGCATGT TERM 3961 2921125 - 2921106 - GR 100 -13.6 -4.21607 | opp_overlap 2921106 CGTACCCAATAGAAA GGCCGGTT AACG AACCGGCC TTCATGTGTGCATGT UTI89_C2983 2922658 - 2921417 - | portal protein TERM 3962 2922574 - 2922627 + gr 73 -3.8 -4.87291 | gap 3, opp_overlap 2922580, overlap 2922575 CGGTATAGGTGTCGT ATGACAGC-CCGATAGCCTCCGCCAGC TCT GCTGGCGTGGTC-ACCGGCGC-GTCAC TTTTTCGTTGAAATA ymfR 2922840 - 2922658 - | hypothetical protein UTI89_C2985 2924585 - 2922852 - | bacteriophage V large terminase subunit TERM 3963 2923590 - 2923607 + g 77 -2.7 -5.07652 | gap 1 CGCCGAACGCGCCGA CACC-CAG ATA TTGAGGTG TTTTGTTTTAAAGAC TERM 3964 2923692 - 2923709 + g 72 -5.6 -4.57073 | GCGATAAACCGACAC GCCAAT ATTTGG ATTGGC TTTTTCCAGCACCTG UTI89_C2986 2925076 - 2924582 - | bacteriophage V small terminase subunit TERM 3965 2924699 - 2924710 + g 74 -2.2 -5.1287 | CGTGCTGCTCATCTC GGAC TCCT GTTC TTTTTTGGCTGTCAG TERM 3966 2924767 - 2924786 + g 74 -6.5 -4.56775 | TTGCGCCGGTGATGG TATTGCC CTGTAT GGCAATA TTTTTCACAGCACGT UTI89_C2987 2925552 - 2925202 - | hypothetical protein TERM 3967 2925510 - 2925531 + g 72 -7.1 -4.20696 | CAGTGGTGGTTTGGC GGCAGCCGC GAAC GCGGCAGGC TTTTGGGGTTCGTGG TERM 3968 2925960 - 2925971 + r 71 -4.4 -4.68511 | ATTGATTTATTTTTA TCCA AAGG TGGA TTTATTTATATTAGA UTI89_C2988 2926449 - 2926201 - | hypothetical protein UTI89_C2989 2926960 - 2926523 - | hypothetical protein UTI89_C2990 2927433 - 2926957 - | putative endolysin of prophage CP-933X UTI89_C2991 2927725 - 2927420 - | putative holin protein of prophage CP-933X TERM 3969 2927704 - 2927689 - G 72 -6.8 -4.27443 | overlap 2927686 TGATCAGCAAAACAA GCCAGA ACGC TCCGGC AAGATTCTCTTTTTC TERM 3970 2927814 - 2927830 + r 72 -5.9 -4.4891 | AAATTACATTCTAAT TCATCAG GCA TTGATGA TTTTATAATAATAAA TERM 3971 2927834 - 2927875 + r 100 -14.2 -4.68908 | gap 1, opp_overlap 2927839 2927842 2927846, overlap 2927836 2927839 AGGCATTGATGATTT TAT-AATAATAAAGGCCGT TCGTT ACGGCCTTTATTATTGATA TTTATTTTACATCCC TERM 3972 2927836 - 2927872 + r 100 -16.2 -2.962 | opp_overlap 2927839 2927842 2927846, overlap 2927834 2927839 GCATTGATGATTTTA TAATAATAAAGGCCGT TCGTT ACGGCCTTTATTATTG ATATTTATTTTACAT TERM 3973 2927839 - 2927869 + r 100 -15.7 -3.60072 | opp_overlap 2927839 2927842 2927846, overlap 2927836 2927834 TTGATGATTTTATAA TAATAAAGGCCGT TCGTT ACGGCCTTTATTA TTGATATTTATTTTA TERM 3974 2927869 - 2927839 - R 100 -15.7 -3.34043 | opp_overlap 2927839 2927836 2927834, overlap 2927842 2927846 TTGATGATTTTATAA TAATAAAGGCCGT TCGTT ACGGCCTTTATTA TTGATATTTATTTTA TERM 3975 2927866 - 2927842 - R 100 -13 -3.81 | opp_overlap 2927839 2927836 2927834, overlap 2927839 2927846 ATGATTTTATAATAA TAAAGGCCGT TCGTT ACGGCCTTTA TTATTGATATTTATT TERM 3976 2927862 - 2927846 - R 89 -9.4 -4.51812 | opp_overlap 2927839 2927836 2927834, overlap 2927842 2927839 TTTTATAATAATAAA GGCCGT TCGTT ACGGCC TTTATTATTGATATT UTI89_C2992 2928212 - 2927877 - | hypothetical protein TERM 3977 2928289 - 2928274 - R 100 -10.4 -5.39681 | opp_overlap 2928274 ACAAGTAAATAAAAA CCCGCT CAAC AGCGGG TTCGTGAAAATTATC TERM 3978 2928274 - 2928289 + r 74 -10.4 -3.17219 | opp_overlap 2928274 ACAAGTAAATAAAAA CCCGCT CAAC AGCGGG TTCGTGAAAATTATC UTI89_C2993 2929180 - 2928398 - | lambdoid prophage Qin antitermination protein Q-like protein ydfU1 2930159 - 2929164 - | hypothetical protein TERM 3979 2929479 - 2929459 - G 72 -4.6 -4.66537 | overlap 2929462 GGGCGTAACATAAAA GACTCCGG CGACT CCGGATCC ACTTTCAGCGCCAGC UTI89_C2995 2930958 - 2930161 - | hypothetical protein TERM 3980 2930784 - 2930807 + g 73 -9.6 -3.65314 | overlap 2930785 CTGGCTCTATATTGA CCGAGTTGCA AATC TGCAACTCGC TTATTAAACGTTCAG TERM 3981 2930785 - 2930806 + g 81 -13.1 -2.78867 | overlap 2930784 TGGCTCTATATTGAC CGAGTTGCA AATC TGCAACTCG CTTATTAAACGTTCA UTI89_C2996 2931367 - 2930978 - | bacteriophage V crossover junction endodeoxyribonuclease UTI89_C2997 2931690 - 2931364 - | hypothetical protein UTI89_C2998 2932340 - 2931687 - | bacteriophage V DNA adenine methylase yfdN1 2932834 - 2932340 - | hypothetical protein TERM 3982 2932386 - 2932401 + g 72 -6.8 -4.18018 | CACTCTTCACCCGAT GCAGCG CGCT TGCTGC TTTTCCGTAAGCACC UTI89_C3000 2933772 - 2932831 - | hypothetical protein TERM 3983 2933284 - 2933318 + g 100 -8.4 -5.71712 | CTCCTGTTCAGCCGT CTGCGTGTCCGGTTGC GAA GCGTCCGGACGAGAAG TTTTTTTATCTGACG TERM 3984 2933376 - 2933391 + g 81 -4.6 -5.03747 | overlap 2933377 CCCCGCCAGATTCTG ACGGGT GAAA ACCCGC TTTTTTGCCAGATTT TERM 3985 2933406 - 2933448 + g 81 -9.4 -4.09685 | gap 1 CTTTTTTGCCAGATT TC-GACGCATCAAATTTTG ACGGGG CAGATTTTGATGCGTCAGA TTTTGACGGGTCAGA ymfM 2934120 - 2933782 - | hypothetical protein ymfL 2934680 - 2934117 - | hypothetical protein UTI89_C3003 2935215 - 2934712 - | hypothetical protein TERM 3986 2934788 - 2934804 + gH 88 -5.1 -5.25803 | opp_overlap 2934801 TGCTCAAGTTTTTTA GCCAG CACAAAA CTGGC TTTTTTATAGCCATT TERM 3987 2934965 - 2934989 + gH 73 -5 -4.62957 | opp_overlap 2934952 2934967, overlap 2934960 2934966 2934967 AATGAACCTTCAAGA TACTTGTACC TTAAC GGTACAAGGG TTTTAATTTCGTTAT TERM 3988 2934987 - 2934967 - GH 71 -9.8 -3.08867 | opp_overlap 2934960 2934966 2934965 2934967, overlap 2934952 TGAACCTTCAAGATA CTTGTACC TTAAC GGTACAAG GGTTTTAATTTCGTT ymfK 2935003 - 2935677 + | putative phage repressor TERM 3989 2935692 - 2935705 + Tr 100 -8.1 -5.71983 | opp_overlap 2935692 ATCAATGTTTATGAA CCTGC TTCG GCAGG TTTTTTTATACTTGA TERM 3990 2935851 - 2935836 - TR 100 -8.2 -5.5112 | opp_overlap 2935836 GTTAGCAACAAAAAA GCGCCC TATA GGACGC TTCGCTCTTTAACAA UTI89_C3005 2936392 - 2935880 - | hypothetical protein TERM 3991 2936677 - 2936718 + H 89 -10.1 -4.56597 | gap 1, overlap 2936675 2936678 GCTGTGTGTAGTCCT G-GCGGTACCAGCTTGTACC CTT GCTTCCGGCTGGTACCGCTC TTTTTACAAAACAGA TERM 3992 2936678 - 2936716 + H 100 -13.8 -3.90048 | overlap 2936675 2936677 CTGTGTGTAGTCCTG GCGGTACCAGCTTGTACC CTT GCTTCCGGCTGGTACCGC TCTTTTTACAAAACA TERM 3993 2936786 - 2936796 + H 70 -6.8 -4.02733 | opp_overlap 2936773 2936769, overlap 2936782 CACCCGGGCGGCTGC CACC GCA GGTG TTCTTCTCTGTTTTG yfdQ1 2937289 - 2938113 + | hypothetical protein TERM 3994 2938129 - 2938144 + F 82 -10.4 -3.86346 | opp_overlap 2938129 TTTCATTACTGCAAA TGCCCC TGCG GGGGCA TTTATGGAAACGTAA TERM 3995 2938144 - 2938129 - f 78 -10.4 -3.62096 | opp_overlap 2938129 TTTCATTACTGCAAA TGCCCC TGCG GGGGCA TTTATGGAAACGTAA TERM 3996 2938323 - 2938298 - g 84 -7.7 -4.60949 | gap 1, opp_overlap 2938298 2938299, overlap 2938300 GACAGGATAAATAAA GACGACATCGTT ATT AACGATATCG-C GGTTTCTCTTTCAAA TERM 3997 2938322 - 2938300 - g 90 -11.4 -3.90309 | opp_overlap 2938299 2938298, overlap 2938298 CAGGATAAATAAAGA CGACATCGTT ATT AACGATATCG CGGTTTCTCTTTCAA yfdR1 2938214 - 2938765 + | hypothetical protein UTI89_C3008 2938850 - 2939740 + | hypothetical protein TERM 3998 2940122 - 2940099 - g 77 -8.8 -4.04415 | overlap 2940101 CCAAAGAACATTAAA TACGCCGAGC GTAC ACTCGGCGAA ATCCATAATAAGATC TERM 3999 2940120 - 2940101 - g 85 -11.4 -3.59781 | overlap 2940099 AAAGAACATTAAATA CGCCGAGC GTAC ACTCGGCG AAATCCATAATAAGA UTI89_C3009 2939949 - 2941121 + | hypothetical protein UTI89_C3010 2941712 - 2941113 - | hypothetical protein UTI89_C3011 2942067 - 2941741 - | hypothetical protein UTI89_C3012 2942983 - 2942072 - | hypothetical protein UTI89_C3013 2942958 - 2943212 + | hypothetical protein TERM 4000 2943278 - 2943254 - fH 91 -6.3 -5.39721 | overlap 2943259 2943264 TGAGGAGACAAAAAA GGATACGCAAC GGA GTCGCGACTCC CTATGACATTAAAGC TERM 4001 2943307 - 2943292 - fH 93 -11.8 -3.86202 | opp_overlap 2943292 CCCTATGACATTAAA GCCCGC TGAT GCGGGC TTTTTTATTGGTCCT TERM 4002 2943292 - 2943307 + FH 100 -11.8 -5.52023 | opp_overlap 2943292 CCCTATGACATTAAA GCCCGC TGAT GCGGGC TTTTTTATTGGTCCT ygaT 2943844 - 2944821 + | hypothetical protein TERM 4003 2944953 - 2944943 - gf 70 -4.6 -4.56597 | overlap 2944945 2944946 GCGTTGCTGGAAAAA GAGC CCG GCCC GGCCTGTCACCAGAC TERM 4004 2945470 - 2945488 + GF 70 -5.2 -4.38927 | opp_overlap 2945469, overlap 2945471 CCGGCTGGTGAAAAT GCTCGG CCTCGAA CCGGGC TTTATTATCTGCCCG TERM 4005 2945580 - 2945590 + GF 88 -8.2 -4.60041 | overlap 2945568 ACCCCATTCCCGACC CGGC AAT GCCG TTTTTGGGCGTGCAT ygaF 2944775 - 2946109 + | hypothetical protein TERM 4006 2946637 - 2946689 + G 74 -9.9 -3.50393 | gap 3, opp_overlap 2946630 2946631 CCCGTAAAGCCGGTC CGGCG-CTGGC-GGCAGGCTGCA-CG ATGG TGCTGAAGCCCGCCAGTCAGACGCCG TTCTCTGCGCTGGCG TERM 4007 2946912 - 2946885 - g 79 -2.6 -5.28755 | gap 1, opp_overlap 2946897 2946899 2946899 AAAGACATCAAAAAA GTGTCGCTGGAGC TGG GCGGCAACG-CAC CGTTTATTGTCTTTG gabD 2946132 - 2947580 + | succinate-semialdehyde dehydrogenase I gabT 2947588 - 2948874 + | 4-aminobutyrate aminotransferase TERM 4008 2948896 - 2948908 + F 71 -9.1 -3.30124 | overlap 2948895 2948905 ACCCATGCCGGAGGC GACGC TGC GCGTC TTGTCCGGCCTACGC gabP 2949112 - 2950512 + | gamma-aminobutyrate transporter TERM 4009 2950738 - 2950761 + G 70 -6.8 -4.07568 | gap 1, overlap 2950740 ATCGGGTGGCGTCTA TGTCAGAGCAG GAG CTGCTC-GATA TTTTCGACGCCCGCG TERM 4010 2951103 - 2951128 + G 73 -11.8 -2.56596 | overlap 2951099 CTGACTGCGACGGTA CTGGCGCGAG ATACCG CGCGCGCCAG TGAGTTAATGCGCCA ygaE 2950533 - 2951195 + | DNA-binding transcriptional regulator CsiR ygaU 2951645 - 2951196 - | hypothetical protein TERM 4011 2951223 - 2951245 + g 88 -8.4 -4.63184 | overlap 2951220 2951224 2951240 AATACGCAACACTTG CCCCGGGTAA ATT TTATCCGGGC TTTTTAGCATCGGTT TERM 4012 2951224 - 2951244 + g 80 -11.9 -3.37188 | overlap 2951220 2951223 2951240 ATACGCAACACTTGC CCCGGGTAA ATT TTATCCGGG CTTTTTAGCATCGGT TERM 4013 2951261 - 2951275 + g 71 -2.8 -4.77567 | overlap 2951263 TTTTTAGCATCGGTT TATTCG CTT CGAAGA TTTTATTGTACAGAT TERM 4014 2951713 - 2951694 - RH 90 -12.8 -3.29649 | AGTGTAGCAGAGGAA CGCGGCGC GTTA ACGCCGCG GGGGTGAACACAGGT yqaE 2951887 - 2951729 - | hypothetical protein UTI89_C3021 2951717 - 2951902 + | hypothetical protein TERM 4015 2951938 - 2951926 - fH 76 -6.3 -4.58395 | CTCATTGTTTAAAAA GAGAT TTT ATCTC TTAAGCGTAGTAATT ygaV 2952070 - 2952369 + | transcriptional regulator ygaP 2952379 - 2952903 + | hypothetical protein stpA 2953354 - 2952950 - | DNA binding protein, nucleoid-associated TERM 4016 2953070 - 2953087 + g 83 -6.2 -5.00616 | overlap 2953069 GATGAATTTATATTT CGCCGG ACGCGG CTGGCG TTTTTTACCAGCGCG UTI89_C3026 2953768 - 2953896 + | hypothetical protein ygaW 2954022 - 2954471 + | hypothetical protein TERM 4017 2954482 - 2954504 + T 100 -14.8 -3.42283 | overlap 2954480 CCTGACCCTTCTTTT CGCGACTGGC ATC GCCAGCCGCG TCTTTAACTGGCTTC ygaC 2954852 - 2954508 - | hypothetical protein TERM 4018 2954674 - 2954684 + g 70 -5.4 -4.43681 | overlap 2954660 2954657 GGTTCAGCCAGTGTT GAAC TAC GTTC TTTTAATGTTGGATG ygaM 2954992 - 2955333 + | hypothetical protein TERM 4019 2955365 - 2955385 + T 100 -16.9 -5.15969 | opp_overlap 2955355 AATACGCGTCTTTGA CCCCGAAGC CTG GCTTCGGGG TTTTTTAGCTTAAGG UTI89_C3030 2956724 - 2955390 - | hypothetical protein UTI89_C3031 2956812 - 2957243 + | hypothetical protein UTI89_C3032 2957682 - 2957428 - | hypothetical protein nrdH 2957452 - 2957697 + | glutaredoxin-like protein nrdI 2957694 - 2958104 + | ribonucleotide reductase stimulatory protein TERM 4020 2959118 - 2959150 + GF 71 -7.7 -3.72141 | opp_overlap 2959147 AAATACCTCAACGCC CGTGATTTCTTCCAG CGA CTGGCAGAAATCCAG TTTGAGTCTGGCTAT TERM 4021 2959371 - 2959398 + GF 71 -8.4 -3.54129 | gap 1, overlap 2959371 ATTCCCCCGACTTTG CC-CGCACGGTAG AGA CTGCCGTACGCGG TTTAACGGCGGTGTC nrdE 2958077 - 2960221 + | ribonucleotide-diphosphate reductase subunit alpha TERM 4022 2960628 - 2960614 - g 70 -3.5 -4.67982 | gap 1, overlap 2960615 2960616 CTGGAGCGAAGAAAA CGC-GC CGTT GCAGCG AAAAGCACAGATTAT TERM 4023 2960866 - 2960848 - g 76 -3.8 -5.00846 | overlap 2960851 TAAATATCAGAAAAA CCAGGAAA AGA TCTCCCAG GCACAGCGTGAAGAG nrdF 2960231 - 2961190 + | ribonucleotide-diphosphate reductase subunit beta TERM 4024 2961305 - 2961329 + F 100 -7.2 -5.62219 | CTCTGTTGCATTATT CGCCTGAA ACCACAATA TTCAGGCG TTTTTTTGCTATCTT proV 2961546 - 2962748 + | glycine betaine transporter ATP-binding subunit TERM 4025 2962960 - 2962973 + G 72 -6.7 -4.28018 | opp_overlap 2962951 ACTGAAGGGATCGAC TGGGT CGTT ACCCA TTTTCGTCCCGTCTT proW 2962741 - 2963805 + | glycine betaine transporter membrane protein TERM 4026 2963815 - 2963833 + F 76 -10.2 -3.31144 | overlap 2963816 AAGTAACTCTGCACT TGCCCGGT GAC GCCGGGCG TTATCACCCTGCCAA TERM 4027 2963816 - 2963832 + F 77 -11.5 -2.58544 | overlap 2963815 AGTAACTCTGCACTT GCCCGGT GAC GCCGGGC GTTATCACCCTGCCA proX 2963863 - 2964855 + | glycine betaine transporter periplasmic subunit TERM 4028 2964847 - 2964835 - f 71 -9.1 -3.33696 | GGCTGGGTGAATGAA GCGCT GGC AGCGC AGAAGTAATTTTTAT TERM 4029 2964865 - 2964897 + F 75 -10.6 -2.87931 | gap 1 AAGTAATTTTTATTC G-GGCGGATAAGGCG TTTT TGCCTCATCCGCCGC TCTGTACACAATGCC UTI89_C3040 2964908 - 2965054 + | hypothetical protein ygaY 2965047 - 2966231 + | putative transport protein ygaZ 2966355 - 2967092 + | hypothetical protein TERM 4030 2967319 - 2967329 + G 70 -6.8 -4.03234 | GTCGGCTTCGCGGTA CTGG GTG CCAG TTTCTATAAAACACG ygaH 2967082 - 2967417 + | hypothetical protein mprA 2967508 - 2968038 + | transcriptional repressor MprA TERM 4031 2968086 - 2968109 + F 100 -12.5 -4.56597 | opp_overlap 2968085 2968084 2968082 2968102 AAAGAAAAAATGACT GGCCAGCAT CGCAAC ATGCTGGCC TTTTTGGCAAGCAGG TERM 4032 2968576 - 2968565 - g 86 -5.8 -5.03314 | TTGAGGTGCAAAAAA TCGC CCTC GCGA AAGCACAAAGCGACT emrA 2968153 - 2969337 + | multidrug resistance protein A emrB 2969345 - 2970892 + | multidrug resistance protein B TERM 4033 2970918 - 2970903 - f 77 -10.4 -3.55801 | opp_overlap 2970903 ACTAAGGTTGTCAAA GGGAGC TGCG GCTCCC TTTTTATTTGCTCAT TERM 4034 2970903 - 2970918 + F 100 -10.4 -5.34309 | opp_overlap 2970903 ACTAAGGTTGTCAAA GGGAGC TGCG GCTCCC TTTTTATTTGCTCAT TERM 4035 2971012 - 2971029 + F 72 -7.7 -3.90608 | overlap 2971013 TCACCATTAACCGGT TCTGAGC ATTC GCTCAGG TTGTTAATTCTCTTT TERM 4036 2971293 - 2971282 - g 74 -2.2 -5.03994 | GTGCACACAGAAAAA CTCG ACGG CGAA AATAACTGCCTTAAC UTI89_C3047 2971150 - 2971857 + | hypothetical protein TERM 4037 2972242 - 2972275 + G 72 -7.3 -4.24342 | overlap 2972255 GTCTGCATGGGTTAC CGCTATGGTTACTGG AACG CCCGGAACCGGAGCG TTTGTTGCTCACGGC UTI89_C3048 2971854 - 2972966 + | hypothetical protein TERM 4038 2972969 - 2973001 + T 75 -9.8 -3.51825 | gap 1, opp_overlap 2972972, overlap 2972971 2972972 GACTGACAGGTAACA AAAGCCGGGC-GGTG TTTT CACCAGCCCGGCCTC TTCTGCTTAAACTGA TERM 4039 2972971 - 2972999 + T 90 -12.4 -3.33214 | gap 1, opp_overlap 2972972, overlap 2972969 2972972 CTGACAGGTAACAAA AGCCGGGC-GGTG TTTT CACCAGCCCGGCC TCTTCTGCTTAAACT TERM 4040 2972998 - 2972972 - T 100 -15.9 -4.70169 | gap 1, opp_overlap 2972971 2972969 2972972 TGACAGGTAACAAAA GCCGGGC-GGTG TTTT CACCAGCCCGGC CTCTTCTGCTTAAAC TERM 4041 2972972 - 2972998 + T 100 -15.9 -2.59447 | gap 1, opp_overlap 2972972, overlap 2972971 2972969 TGACAGGTAACAAAA GCCGGGC-GGTG TTTT CACCAGCCCGGC CTCTTCTGCTTAAAC luxS 2973532 - 2973017 - | S-ribosylhomocysteinase TERM 4042 2973651 - 2973668 + r 100 -11.3 -5.4433 | CAGAGATGAAATTTT GGCCACT CACG AGTGGCC TTTTTCTTTATCTGT gshA 2975239 - 2973683 - | glutamate--cysteine ligase yqaA 2975740 - 2975312 - | hypothetical protein yqaB 2976303 - 2975737 - | fructose-1-phosphatase csrA 2977538 - 2977353 - | carbon storage regulator alaS 2980403 - 2977773 - | alanyl-tRNA synthetase UTI89_C3059 2980308 - 2980490 + | hypothetical protein recX 2981031 - 2980531 - | recombination regulator RecX TERM 4043 2981085 - 2981056 - R 95 -8.5 -5.1925 | opp_overlap 2981062, overlap 2981057 2981062 TTACAACTTAAAAAA GCAAAAGGGCCGC AGAT GCGACCCTTGTGT ATCAAACAAGACGAT TERM 4044 2981084 - 2981057 - R 89 -12 -3.70465 | opp_overlap 2981062, overlap 2981056 2981062 TACAACTTAAAAAAG CAAAAGGGCCGC AGAT GCGACCCTTGTG TATCAAACAAGACGA TERM 4045 2981062 - 2981079 + r 72 -8.3 -3.58726 | opp_overlap 2981062 2981057 2981056 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA TERM 4046 2981079 - 2981062 - R 91 -10.5 -4.86862 | opp_overlap 2981062, overlap 2981057 2981056 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA recA 2982161 - 2981100 - | recombinase A TERM 4047 2981906 - 2981886 - G 72 -7.5 -3.93695 | opp_overlap 2981902 2981903 2981905 TTCAGCATCGATAAA CGCACAGGT TTT ACCTTCGCG CTGCGCTGCGGCGAT ygaD 2982741 - 2982241 - | competence damage-inducible protein A TERM 4048 2982883 - 2982839 - R 82 -5 -5.28778 | gap 1, opp_overlap 2982840 2982844, overlap 2982840 AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGCAAAT-AGT TACTGTACGCGCGCC TERM 4049 2982882 - 2982840 - R 75 -8.5 -3.76182 | gap 1, opp_overlap 2982840 2982844, overlap 2982839 GGATTCAGAAAAAAG CTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGCAAAT-AG TTACTGTACGCGCGC mltB 2984073 - 2982883 - | murein hydrolase B TERM 4050 2983416 - 2983397 - G 71 -2.8 -4.83169 | gap 1, opp_overlap 2983400 AGCTCGCCAGAAAAA TACTC-CGC GCG GCGTGGGTA GTTAAATGACAGCGT TERM 4051 2984439 - 2984452 + G 70 -4.5 -4.51238 | overlap 2984436 GTTATCTGCTGCTAC CGTGC ATTG GTACG TTTGTCTTTTGTAAC srlA 2984225 - 2984788 + | PTS system, glucitol/sorbitol-specific IIC2 component srlE 2984785 - 2985744 + | PTS system, glucitol-sorbitol-specific IIB component and second of two IIC components srlB 2985755 - 2986126 + | glucitol/sorbitol-specific PTS system component IIA srlD 2986130 - 2986909 + | sorbitol-6-phosphate dehydrogenase TERM 4052 2986941 - 2986914 - f 70 -9.2 -3.14564 | gap 1, overlap 2986916 TGATGTTCTGATCAA CAGCGGAGATCTT TTA AGGATCTCCGC-G CGACTAATAGAATGC TERM 4053 2986940 - 2986916 - f 91 -12.9 -3.13522 | overlap 2986914 ATGTTCTGATCAACA GCGGAGATCTT TTA AGGATCTCCGC GCGACTAATAGAATG gutM 2987015 - 2987374 + | DNA-binding transcriptional activator GutM TERM 4054 2988135 - 2988111 - g 78 -10.8 -3.55444 | opp_overlap 2988133 TTTGTAGTCTTGAAA GCGTCGATAA GCTGA TTACCGACGC AGGTATCGATCCAGC srlR 2987441 - 2988214 + | DNA-bindng transcriptional repressor SrlR TERM 4055 2988405 - 2988418 + G 100 -3.7 -5.64274 | overlap 2988406 GCAACGCTTGCCAGC ACCGG CACA CCGGC TTTTTTTGTCCATCC gutQ 2988207 - 2989172 + | D-arabinose 5-phosphate isomerase ygaA 2990683 - 2989169 - | anaerobic nitric oxide reductase transcription regulator TERM 4056 2990969 - 2990955 - g 90 -7.8 -4.76963 | overlap 2990956 GTACAGAATATAAAA CGCTGC GCG GCAGCA GCTACAACAGCTACC TERM 4057 2990968 - 2990956 - g 71 -9.1 -3.45093 | overlap 2990955 TACAGAATATAAAAC GCTGC GCG GCAGC AGCTACAACAGCTAC norV 2990870 - 2992309 + | anaerobic nitric oxide reductase flavorubredoxin TERM 4058 2992614 - 2992638 + G 72 -7.8 -3.86015 | opp_overlap 2992615, overlap 2992615 GCAATACGACAAGTT AGTGCTGGCA ACCGG TGCCAGCGCC TTTGTCCCGCCAGTG TERM 4059 2992615 - 2992637 + G 75 -11.3 -2.91395 | opp_overlap 2992615, overlap 2992614 CAATACGACAAGTTA GTGCTGGCA ACCGG TGCCAGCGC CTTTGTCCCGCCAGT ygbD 2992306 - 2993439 + | nitric oxide reductase TERM 4060 2993589 - 2993556 - T 81 -9.5 -4.08767 | opp_overlap 2993563 2993564 2993566, overlap 2993557 TGCACTGTCCCAAAA TGTCGGATGCGACGC TGGC GCGTCTTATCCGACC TGCGGGGATGAATAT TERM 4061 2993588 - 2993557 - T 86 -13 -3.05046 | opp_overlap 2993563 2993564 2993566, overlap 2993556 GCACTGTCCCAAAAT GTCGGATGCGACGC TGGC GCGTCTTATCCGAC CTGCGGGGATGAATA hypF 2995987 - 2993663 - | hydrogenase maturation protein HypF TERM 4062 2994262 - 2994248 - G 90 -11.4 -3.86346 | opp_overlap 2994256 2994257 CCACTCCGGCACAAA GCGCAG GCA CTGCGC CAGCAGGTTTCGCCA TERM 4063 2995894 - 2995904 + g 77 -3.2 -5.09426 | opp_overlap 2995881 TACGCAGTTGGACAC CGCA AGA TGTG TTTTTTGCCATTGAG TERM 4064 2996080 - 2996094 + r 90 -9.2 -4.85599 | opp_overlap 2996077 2996079 TTTTTAGAACATCAG CGCCGT GCG GCGGCG TTTTTCTGCGCTCAG hydN 2996610 - 2996068 - | electron transport protein HydN TERM 4065 2996731 - 2996701 - R 86 -7.7 -4.82667 | gap 1, opp_overlap 2996704 2996725, overlap 2996702 2996704 GTACTACAGGAAAAA CGATGTCATCGACA CTAG TGACGATGACAT-G TGATGACAATGTTTA TERM 4066 2996704 - 2996729 + r 71 -10.5 -2.79679 | opp_overlap 2996704 2996701 2996702, overlap 2996725 CTACAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT TERM 4067 2996729 - 2996704 - R 76 -10.5 -3.30658 | opp_overlap 2996704 2996725, overlap 2996701 2996702 CTACAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT ascG 2997796 - 2996744 - | ascBF operon repressor ascF 2998014 - 2999471 + | cellobiose/arbutin/salicin-specific PTS system components IIBC TERM 4068 3000257 - 3000268 + G 84 -3.6 -5.29782 | GCGCTGGAGAAAGAT CGGG AAAA CCTG TTTTTTATCGATGTG ascB 2999480 - 3000904 + | cryptic 6-phospho-beta-glucosidase TERM 4069 3000974 - 3000950 - T 79 -12.1 -2.57344 | opp_overlap 3000949 3000962, overlap 3000949 TATCCGGCCTACAAG GCCCGATAAGC GTT GCGCATCGGGC AATCTTGGGTTTGGC ygjM 3001421 - 3001002 - | hypothetical protein hycI 3002136 - 3001666 - | hydrogenase 3 maturation protease TERM 4070 3001992 - 3002002 + g 70 -6.8 -4.14243 | GCAGTTCGCGGATAG CGAC AAT GTCG TTTTCCGGTGCGCTA hycH 3002539 - 3002129 - | formate hydrogenlyase maturation protein HycH TERM 4071 3002460 - 3002483 + g 71 -11 -2.86747 | overlap 3002458 CTGTAATAGACCACC TGCTGCGCCT CGGC GGGCGTAGCA TCGTTCTCATCAATG hycG 3003303 - 3002536 - | formate hydrogenlyase subunit 7 hycF 3003845 - 3003303 - | formate hydrogenlyase complex iron-sulfur subunit hycE 3005564 - 3003855 - | formate hydrogenlyase subunit 5 precursor hycD 3006505 - 3005582 - | membrane-spanning protein of formate hydrogenase hycC 3008334 - 3006508 - | formate hydrogenlyase subunit 3 hycB 3008942 - 3008331 - | formate hydrogenlyase subunit 2 TERM 4072 3008420 - 3008395 - G 74 -7.5 -4.08064 | opp_overlap 3008395 AAGTCCGTGTTAAAA GTCAGCTCACG CTTA CGTTTGCTGAC GCGGGCGATATCGGT TERM 4073 3008793 - 3008810 + g 74 -2.7 -4.99134 | gap 1, opp_overlap 3008795, overlap 3008795 3008796 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTTAGCAT TERM 4074 3009018 - 3008980 - R 80 -8.3 -4.2558 | gap 1 CATTTTTGACGAAAA CATGCCGATGAAATGTCA TTTT CGACACT-CATCGACACG CCCATCCCCAAACAG TERM 4075 3009045 - 3009031 - R 87 -11.4 -3.57263 | opp_overlap 3009043 ACGCCCATCCCCAAA CAGGCG TAA CGCCTG CAAAACGGGCAAAGC hycA 3009528 - 3009067 - | formate hydrogenlyase regulatory protein HycA hypA 3009728 - 3010090 + | hydrogenase nickel incorporation protein hypB 3010094 - 3010966 + | hydrogenase nickel incorporation protein HypB TERM 4076 3011079 - 3011115 + G 88 -12.4 -3.60296 | gap 1 CGATGAAAACGGTCA GCCACGCGTGGGCCAGT GGGT ACTGGTTCACGT-TGGC TTTGCCATGAGCGTA hypC 3010957 - 3011229 + | hydrogenase isoenzymes formation protein TERM 4077 3011578 - 3011568 - g 72 -6.8 -4.18018 | CTGTTGCAGGCAAAA GCAC GCG GTGC CGATGTGCGCATCGT TERM 4078 3011842 - 3011863 + G 72 -5.9 -4.36914 | GTCACGTTAGTATGG TTATCGGCA CTGA TGCCTATAA TTTTATCGCCAGCGA hypD 3011229 - 3012350 + | hydrogenase isoenzymes formation protein HypD hypE 3012347 - 3013357 + | hydrogenase isoenzymes formation protein HypE TERM 4079 3013397 - 3013413 + G 100 -13.7 -3.72576 | AGTCAATGACCTTTT GCACCGC TTT GCGGTGC TTTCCTGGAAGAACA TERM 4080 3013512 - 3013528 + G 72 -10.1 -3.35775 | overlap 3013511 CAGCAGCCCGATCTG GCCTCGC TGT GTGAGGC TCTTTCGCAACTGGT TERM 4081 3013599 - 3013547 - g 77 -10 -3.60792 | gap 2, opp_overlap 3013558 3013595 TTCGCAACTGGTAAA GCGTTCTGCGCTCGCCGACAACGC GGCGATT GTGTTGT-GGCAAGCGCAGA-CTC AACGTGCGTCTTATT TERM 4082 3013558 - 3013575 + G 72 -8.4 -3.7511 | opp_overlap 3013547 TAAAGCGTTCTGCGC TCGCCG ACAACG CGGCGA TTGTGTTGTGGCAAG TERM 4083 3015025 - 3015013 - g 85 -3.3 -5.44119 | overlap 3015014 GCGATCTGAAAAAAA TGGTC GCC GACCG AGAGTTCCGTAGCGA TERM 4084 3015414 - 3015401 - g 78 -5.2 -4.78326 | overlap 3015402 GCTGAAAGAAACAAA CGGC GTGGTT GCCG GGCCTAAAGGCGCTG fhlA 3013395 - 3015509 + | formate hydrogenlyase transcriptional activator UTI89_C3095 3015515 - 3015982 + | potential molybdenum-pterin-binding-protein TERM 4085 3015991 - 3016019 + T 100 -16.1 -4.78326 | overlap 3015993 AGCGTAAGCGCCGTA TTTGCCGGAGAGT ATG GCTCTCCGGCAGA TTTATTTCTTTGGAC TERM 4086 3015993 - 3016017 + T 100 -16.5 -2.66462 | overlap 3015991 CGTAAGCGCCGTATT TGCCGGAGAGT ATG GCTCTCCGGCA GATTTATTTCTTTGG ygbA 3016365 - 3016021 - | hypothetical protein UTI89_C3097 3016575 - 3016420 - | hypothetical protein TERM 4087 3016491 - 3016505 + g 72 -5.6 -4.56597 | opp_overlap 3016492, overlap 3016492 TCGTCATCACGCAAA AGCTGC AAA GCAGCA TTTTTCGCGGAACCG TERM 4088 3016504 - 3016492 - G 82 -9.1 -4.21194 | opp_overlap 3016492 3016491 CGTCATCACGCAAAA GCTGC AAA GCAGC ATTTTTCGCGGAACC TERM 4089 3018243 - 3018226 - g 70 -4.1 -4.62069 | opp_overlap 3018219 3018228 CTGGCACTGGAAAAA CAGCTTT ATGA AGAGCTG TTCGACCTGTTGCTG TERM 4090 3019174 - 3019143 - g 74 -8 -4.14739 | gap 1 CGAGGCATTGGAAAA CCTCGACCCGGATTC ACT GACTCCGCGTC-AGG CGCTGGAATGGATTT mutS 3016651 - 3019212 + | DNA mismatch repair protein TERM 4091 3019245 - 3019219 - T 86 -11 -3.9461 | opp_overlap 3019219 CTGGTGTAATAATAA TTCCCGATAG TCTTTTG CTATCGGGAA TATTAACAACAACTG TERM 4092 3019219 - 3019245 + T 81 -11.7 -3.01924 | opp_overlap 3019219 CTGGTGTAATAATAA TTCCCGATAGT CTTTT GCTATCGGGAA TATTAACAACAACTG TERM 4093 3019312 - 3019277 - T 100 -10.6 -5.38326 | CGAATCAAATAAAAA TACCCTGTATAATAGG AAAG CTTATTTTACAGGGTA AAACCATGCCATCTA insBcp5 3019980 - 3019477 - | InsBcp5 protein UTI89_C3100 3020203 - 3019991 - | hypothetical protein TERM 4094 3020666 - 3020629 - R 79 -9.7 -3.78775 | TTCGCTACCAGCAAA GAGAGATCCAGCTTCGC CAGC GCGCGGCTGGCACTCTC CGGCAGACCGTCGTC ygbI 3021401 - 3020604 - | transcriptional regulator YgbI TERM 4095 3020884 - 3020866 - G 93 -8.9 -5.0065 | GATGCAGAAATAAAA GCCTGAT CAATC ATCAGGC TACGCAGCATGGTCG ygbJ 3021567 - 3022475 + | oxidoreductase YgbJ TERM 4096 3023478 - 3023491 + G 75 -6.7 -4.4009 | AAAAAGCCAGTCAGG CAGTG GAAA CACTG TTTTCTCAACTAGCG TERM 4097 3023526 - 3023536 + G 75 -6.8 -4.30719 | GGTTAGCAGCGGAAG GCGT GAC ACGC TTTATTGTCGCAGGC ygbK 3022472 - 3023734 + | hypothetical protein ygbL 3023731 - 3024369 + | putative aldolase ygbM 3024374 - 3025150 + | hypothetical protein TERM 4098 3025188 - 3025205 + F 77 -11.3 -2.56095 | opp_overlap 3025185, overlap 3025186 CGTACCCATACATCC CCCCATC TACG GATGGGG TAGGTTAACTATAAC ygbN 3025239 - 3026603 + | inner membrane permease YgbN TERM 4099 3026698 - 3026666 - T 79 -11.5 -3.06969 | opp_overlap 3026666, overlap 3026670 TAATGTATGCCAATA TTAACCTCGGTAA TATCTCG CTACCGAGGTTAA TTTTCACTTTGCAAT TERM 4100 3026666 - 3026698 + T 90 -10.8 -4.35926 | opp_overlap 3026666 3026670 TAATGTATGCCAATA TTAACCTCGGTA ATATCTCGC TACCGAGGTTAA TTTTCACTTTGCAAT UTI89_C3107 3027789 - 3026746 - | hypothetical protein TERM 4101 3027639 - 3027653 + g 88 -8.6 -4.63089 | AAAGGTTATTGAGTT TATCGC TTG GCGATA TTATTTTTTCCGCTG UTI89_C3108 3027808 - 3027954 + | hypothetical protein UTI89_C3109 3028014 - 3028565 + | hypothetical protein TERM 4102 3028723 - 3028702 - gT 100 -12.3 -6.11229 | opp_overlap 3028702 3028701 ACCAAAAGAAAAAAA GCCAGCCTC GCTT GAGACTGGC CTTTCTGACAGATGC TERM 4103 3028702 - 3028723 + GT 72 -10.1 -2.91924 | opp_overlap 3028702, overlap 3028701 ACCAAAAGAAAAAAA GCCAGCCTC GCTT GAGACTGGC CTTTCTGACAGATGC rpoS 3029771 - 3028743 - | RNA polymerase sigma factor RpoS UTI89_C3110 3028683 - 3029309 + | hypothetical protein nlpD 3030937 - 3029798 - | lipoprotein NlpD TERM 4104 3030059 - 3030040 - GfH 70 -7 -4.07133 | opp_overlap 3030039 TACCGGCATAAACAA CGCGGCCA TCTG CGGTCGCG ATAATTGCCTGTCCT TERM 4105 3030262 - 3030276 + gFH 73 -5 -4.65078 | TGGTCGCAGTTGGCT TGTTGT TCG GCAACA TTTTGTTAGCACTCT TERM 4106 3030546 - 3030556 + gFH 74 -2.4 -5.04385 | opp_overlap 3030542 CAGGCGATATAGAAA AGCG TGT CGCC TTTTTTCACGGTGTA UTI89_C3113 3030795 - 3030962 + | hypothetical protein pcm 3031703 - 3031077 - | protein-L-isoaspartate O-methyltransferase TERM 4107 3031216 - 3031242 + g 70 -10.9 -2.72511 | overlap 3031215 AGAATCCCGCCTTCG TCCAGCTGCGT CATTA GCGCAGTTGGA ATTTCAGGCGGTGCC surE 3032503 - 3031697 - | stationary phase survival protein SurE truD 3033488 - 3032439 - | tRNA pseudouridine synthase D TERM 4108 3032519 - 3032506 - GR 70 -6.7 -4.07687 | ACGCTGGTTGCAAAA CTTCC CGCC GGAAG CCAGAAATGGATTTC ispF 3033964 - 3033485 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3034674 - 3033964 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 4109 3034639 - 3034627 - G 71 -9.1 -3.53224 | CATTCGGCGGCCAAA TCCGG CCG CCGGA ACCACGGCGCAAACA ftsB 3035004 - 3034693 - | cell division protein FtsB TERM 4110 3035087 - 3035109 + r 77 -11.4 -2.82142 | opp_overlap 3035085, overlap 3035086 ATACCGCGACAACGC GGGCAAATGT ACC ACATTTGTCC ATTGTTACGTATACC ygbE 3035520 - 3035197 - | hypothetical protein cysC 3036175 - 3035570 - | adenylylsulfate kinase TERM 4111 3036115 - 3036085 - G 79 -12.6 -3.00525 | opp_overlap 3036081 3036090 3036093 3036113, overlap 3036080 3036088 3036091 GGCCGGTAAACCACA GCACAACACCACGA TGA CCGTGGTGCTGTTC GCGTTGTTGCGGAGT TERM 4112 3036112 - 3036088 - G 81 -12.9 -2.7314 | opp_overlap 3036081 3036090 3036093, overlap 3036085 3036080 3036091 CGGTAAACCACAGCA CAACACCACGA TGA CCGTGGTGCTG TTCGCGTTGTTGCGG TERM 4113 3036109 - 3036091 - G 78 -11 -3.50929 | opp_overlap 3036090 3036081 3036093, overlap 3036088 3036085 3036080 TAAACCACAGCACAA CACCACGA TGA CCGTGGTG CTGTTCGCGTTGTTG TERM 4114 3036138 - 3036174 + g 81 -9.4 -4.14627 | TGCGGAGTTACTGGG TGGCTATGCCAGACGA CGTTT TCGTCATGCAGAGCCA TTATTTATCTCCCAG cysN 3037602 - 3036175 - | sulfate adenylyltransferase subunit 1 cysD 3038512 - 3037604 - | sulfate adenylyltransferase subunit 2 TERM 4115 3038664 - 3038652 - H 75 -4.8 -4.88228 | opp_overlap 3038661 AGCTAATATCAAAAA GTGC TTAAG GCAC CGGATTTCGGGCGTT iap 3038764 - 3039801 + | alkaline phosphatase isozyme conversion aminopeptidase TERM 4116 3039894 - 3039926 + T 72 -10.5 -2.96329 | opp_overlap 3039894 3039895 3039898, overlap 3039891 ACCAAACCATCACAA TTCAGTACGCGGGGT TTT ACCCCGCGTGGTGGC TACTTCTTCGATTCG UTI89_C3125 3040078 - 3039926 - | hypothetical protein TERM 4117 3040136 - 3040166 + r 88 -9.1 -4.45083 | gap 1, opp_overlap 3040157 TAGGTTCGAACGTAG GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 4118 3040322 - 3040297 - R 100 -9.7 -5.45802 | opp_overlap 3040297 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 3041077 - 3040343 - | phosphoadenosine phosphosulfate reductase cysI 3042863 - 3041151 - | sulfite reductase subunit beta TERM 4119 3041535 - 3041506 - G 95 -11.5 -4.37092 | gap 1, overlap 3041518 3041519 ATGTTGTCGATAAAA GACGGCAGGAAACG CTC CGCTTCC-GCCATC GCCAGCGGGCAAGTC cysJ 3044662 - 3042863 - | sulfite reductase subunit alpha TERM 4120 3043051 - 3043069 + g 76 -7.4 -4.28188 | TCCAGCGCCACAGCT CTGCGC CCTGTTC GCGCAG TTTGTCTTGTACGTA TERM 4121 3044571 - 3044557 - G 70 -7.1 -4.0056 | overlap 3044549 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TAGGAGTTAAATCGG TERM 4122 3044889 - 3044909 + H 70 -6.2 -4.21194 | AATAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA TERM 4123 3045309 - 3045321 + G 73 -9.1 -3.64198 | opp_overlap 3045309 TGATGGTAAAAGAAA CCTGC ACC GCAGG TTGTATCTATCGCGG TERM 4124 3045321 - 3045309 - g 91 -9.1 -4.67048 | opp_overlap 3045309 TGATGGTAAAAGAAA CCTGC ACC GCAGG TTGTATCTATCGCGG ygcM 3044894 - 3045343 + | putative 6-pyruvoyl tetrahydrobiopterin synthase TERM 4125 3045469 - 3045500 + GF 91 -11.5 -4.0174 | overlap 3045470 3045494 3045497 GCCGGTATTGCTGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGG TTTATCCGTTCTGTT TERM 4126 3045470 - 3045499 + GF 93 -15 -2.99959 | overlap 3045469 3045494 3045497 CCGGTATTGCTGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG GTTTATCCGTTCTGT TERM 4127 3046157 - 3046173 + GF 77 -10.1 -3.53811 | overlap 3046153 GTCGTGTTCCGGCAA GCGAGCT GCT GGCTCGC TTTAAAACGCATCCG TERM 4128 3046609 - 3046625 + GF 70 -9.4 -2.95116 | overlap 3046607 CCTGTTCCACCGCTG CGCCAG TTGCT CTGGCG TCATTTACGTCGTCA ygcN 3045391 - 3046692 + | electron transfer flavoprotein-quinone oxidoreductase ygcN ygcO 3046647 - 3046943 + | ferredoxin-like protein YgcO TERM 4129 3047029 - 3047052 + G 82 -7.4 -4.49906 | opp_overlap 3047016 AATGCCAGCCTGCAA CTGGCAATCG ACTC TGAATGCCAG TTTATTTCCGTGTTG ygcP 3046960 - 3047535 + | putative anti-terminator regulatory protein ygcQ 3048576 - 3047683 - | putative flavoprotein TERM 4130 3048169 - 3048201 + gT 87 -4.7 -5.19879 | GTTTTTATCTGCTCC CGCCTGACGTGCC AGCGAAA GGCATAGCGGGCG TTTTTCTGTTTGCAG ygcR 3049325 - 3048540 - | putative transport protein ygcS 3050706 - 3049297 - | metabolite transport protein YgcS TERM 4131 3049331 - 3049359 + gr 76 -7.4 -4.16182 | gap 1, overlap 3049335 TCATTCGCACCTCCT GCATTTCCCGCCG CCAC CAGCGGG-AGTGC TTTGGTTTCTGGTGC TERM 4132 3050025 - 3050015 - GR 77 -8.2 -4.08216 | opp_overlap 3050015, overlap 3050016 TGAGCTTCTGCAAAA CGCC CCT GGCG CAGTAGCCAGCGTGG TERM 4133 3050223 - 3050208 - GR 78 -8.2 -4.25283 | overlap 3050211 ACGCGCCCAGCAAAA CACCGC GATG GCGGCG CGGAGAAAATTCAGC TERM 4134 3050686 - 3050665 - GR 100 -14.5 -3.9461 | GTCCGGTAATAAGAA CGGCTTCTC GCCT GAGAAGCCG AAAAGGCAACGCCCC TERM 4135 3050720 - 3050691 - GR 93 -11.4 -4.21936 | CTGAGAAGCCGAAAA GGCAACGCCCCG TCATCG CGGAACGCTGCC TGACACATTATTTTT UTI89_C3136 3052182 - 3050728 - | hypothetical protein TERM 4136 3051297 - 3051313 + g 70 -10.1 -3.17392 | TCCCTTCACCCGTCG CCTTCGC AAT GCGAGGG TTACCTTCAGCCATA TERM 4137 3051587 - 3051607 + g 75 -4.5 -4.76041 | overlap 3051589 TGACGAATGTCCGGG CCAGCCGCG CGA CGTGGCACG TTTTTAATGCGTGTG TERM 4138 3052079 - 3052090 + g 82 -2.2 -5.34309 | GGAAATTTACGAAAA CGGT CAAT ACTG TTTTTCTTTAATACT ygcW 3053112 - 3052252 - | oxidoreductase YgcW TERM 4139 3053071 - 3053108 + g 100 -20.1 -2.92712 | opp_overlap 3053071, overlap 3053075 TAAGGCAAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4140 3053108 - 3053071 - G 100 -22.3 -6.15259 | opp_overlap 3053071 3053075 TAAGGCAAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4141 3053075 - 3053104 + g 100 -15.1 -4.13 | opp_overlap 3053071, overlap 3053071 GCAAAAAAAAAGAAA GGTAACTTCCCCC GCGA GAGGGAAGTTACC TTTCTCATTATCTCT TERM 4142 3053112 - 3053134 + g 84 -7.8 -4.62069 | AAGTTACCTTTCTCA TTATCTCTGG TAA CTGGAGATAA TTTTTAGCATAAGGG TERM 4143 3053284 - 3053323 + H 100 -13 -6.08563 | opp_overlap 3053291 AATTACTAGAGACCT GAGAAAAGTAATCCACCT GAAA GGGCGGCTTACTTTTCTC TTTTTTTTGTCTATT TERM 4144 3053316 - 3053291 - H 70 -5.4 -4.4195 | opp_overlap 3053284 AGAGACCTGAGAAAA GTAATCCACC TGAAAG GGCGGCTTAC TTTTCTCTTTTTTTT yqcE 3053356 - 3054633 + | hypothetical protein TERM 4145 3055011 - 3055030 + G 70 -4.2 -4.69622 | overlap 3055014 GAACACACTAATCCT GACGTGGC ATAT GTCACCTC TTTTTCGGGTTATCT TERM 4146 3055251 - 3055266 + G 74 -7.5 -4.06419 | overlap 3055252 CTGGCGACACATTTC CCGGC TGGGCT GCCGG TTGTTTGTACCACCA ygcE 3054660 - 3056138 + | sugar kinase YgcE TERM 4147 3056170 - 3056147 - T 72 -9.4 -3.21912 | overlap 3056148 TGCGTAAGTGAGGAA GGCCGGGCGG GAAA CTGCCCGGCA TGAACATACCTGAAT TERM 4148 3056169 - 3056148 - T 84 -12.9 -2.52933 | overlap 3056147 GCGTAAGTGAGGAAG GCCGGGCGG GAAA CTGCCCGGC ATGAACATACCTGAA TERM 4149 3056179 - 3056220 + T 75 -5.2 -4.77036 | opp_overlap 3056179, overlap 3056189 CCCGGCATGAACATA CCTGA-ATGGTTATCCCCGC TGAC GCGGGGA-ACTCATATCCGG TTTTTGCTGGTGGGC TERM 4150 3056593 - 3056553 - T 81 -9.4 -4.08279 | gap 1, opp_overlap 3056586, overlap 3056559 AGAGGCGACAAAGAA TATAAATGAGTAGAAGTCT TTAC AGA-TTCCACCCATTTATA ACGCTTATAAATGTT TERM 4151 3056586 - 3056606 + T 75 -8.5 -3.72893 | opp_overlap 3056559 3056553 TTTACAGATTCCACC CATTTATAA CGC TTATAAATG TTTAATCAGGCAATA ygcF 3057283 - 3056612 - | hypothetical protein TERM 4152 3057135 - 3057124 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 4153 3057227 - 3057214 - G 84 -3.7 -5.24551 | overlap 3057215 GTAAACGAATAAAAA TGGCG GGGA CGCCG GTAAAGTAACCCTCA UTI89_C3141 3057317 - 3057442 + | hypothetical protein UTI89_C3142 3057456 - 3058070 + | hypothetical protein UTI89_C3144 3058871 - 3058581 - | hypothetical protein UTI89_C3143 3058054 - 3058977 + | hypothetical protein UTI89_C3145 3058992 - 3060140 + | hypothetical protein UTI89_C3147 3060134 - 3061039 + | hypothetical protein TERM 4154 3061055 - 3061074 + T 90 -9.2 -4.66609 | opp_overlap 3061055 3061056, overlap 3061056 CTCAACCATAAAAAA CGCCAGCC CGAA GGCTGGCA TTTTTAAATCAGATA TERM 4155 3061074 - 3061055 - T 100 -11.4 -5.37345 | opp_overlap 3061055 3061056, overlap 3061056 CTCAACCATAAAAAA CGCCAGCC CGAA GGCTGGCA TTTTTAAATCAGATA TERM 4156 3061056 - 3061073 + T 90 -12.7 -3.39483 | opp_overlap 3061055 3061056, overlap 3061055 TCAACCATAAAAAAC GCCAGCC CGAA GGCTGGC ATTTTTAAATCAGAT TERM 4157 3061073 - 3061056 - T 100 -12.7 -3.81322 | opp_overlap 3061056 3061055, overlap 3061055 TCAACCATAAAAAAC GCCAGCC CGAA GGCTGGC ATTTTTAAATCAGAT eno 3062397 - 3061099 - | phosphopyruvate hydratase TERM 4158 3062440 - 3062468 + r 79 -11.7 -2.7458 | opp_overlap 3062442 3062445, overlap 3062439 CTGAAACTCCAGACA AACAACGCGTACC CAG GGTACGCGTTGCC GTTCTAACTTTTTTA TERM 4159 3062466 - 3062442 - R 100 -18.7 -4.07562 | opp_overlap 3062440 3062439, overlap 3062445 GAAACTCCAGACAAA CAACGCGTACC CAG GGTACGCGTTG CCGTTCTAACTTTTT TERM 4160 3062463 - 3062445 - R 100 -14.6 -4.15029 | opp_overlap 3062440 3062439, overlap 3062442 ACTCCAGACAAACAA CGCGTACC CAG GGTACGCG TTGCCGTTCTAACTT pyrG 3064122 - 3062485 - | CTP synthetase mazG 3065141 - 3064350 - | nucleoside triphosphate pyrophosphohydrolase TERM 4161 3064679 - 3064691 + g 74 -7.7 -4.11869 | opp_overlap 3064675 3064679 TCCAGTCGAAACCAA CGTTG GCG CAACG TTTCTGGATTTTTTG chpA 3065548 - 3065213 - | toxin ChpA TERM 4162 3065475 - 3065455 - GH 81 -11.1 -3.42699 | opp_overlap 3065457, overlap 3065457 ACGGACTCAGGACAA CAGCCGGAC GAT GTCCGGCTT GCTCGCTACCTTTTG TERM 4163 3065457 - 3065473 + gH 93 -13.7 -3.19656 | opp_overlap 3065455 3065457 GGACTCAGGACAACA GCCGGAC GAT GTCCGGC TTGCTCGCTACCTTT TERM 4164 3065473 - 3065457 - GH 100 -13.7 -3.28447 | opp_overlap 3065457, overlap 3065455 GGACTCAGGACAACA GCCGGAC GAT GTCCGGC TTGCTCGCTACCTTT chpR 3065796 - 3065548 - | antitoxin MazE UTI89_C3152 3065465 - 3065827 + | hypothetical protein relA 3068108 - 3065874 - | GDP/GTP pyrophosphokinase rumA 3069457 - 3068156 - | 23S rRNA 5-methyluridine methyltransferase TERM 4165 3070053 - 3070068 + G 72 -5.4 -4.56961 | AGAGATCTTTATTTC CAGCGT GATG ATGCTG TTTTGTATCGGTATT TERM 4166 3070386 - 3070365 - g 70 -4.3 -4.57569 | opp_overlap 3070366, overlap 3070366 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 4167 3071491 - 3071478 - g 71 -2.3 -5.02323 | overlap 3071473 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGTA barA 3069514 - 3072270 + | hybrid sensory histidine kinase BarA TERM 4168 3072460 - 3072491 + T 95 -10.9 -4.67943 | opp_overlap 3072466, overlap 3072466 GCGTTTGGCATCAGT CTCAAACCGGCTC CAGATA GAGCCGGTTTTGG TTTTCTGTCTTAACG TERM 4169 3072466 - 3072485 + T 95 -10.7 -4.75518 | opp_overlap 3072466, overlap 3072460 GGCATCAGTCTCAAA CCGGCTC CAGATA GAGCCGG TTTTGGTTTTCTGTC TERM 4170 3072485 - 3072466 - T 87 -11.4 -3.58343 | opp_overlap 3072466 3072460 GGCATCAGTCTCAAA CCGGCTCC AGAT AGAGCCGG TTTTGGTTTTCTGTC gudD 3073841 - 3072501 - | glucarate dehydratase TERM 4171 3073320 - 3073344 + g 70 -10.7 -2.83403 | opp_overlap 3073323, overlap 3073319 ATGACGCAGGCGATA CCAGTCGCATG AGT CATCCGGCTGG CTTTGATACGGCAGC ygcY 3075202 - 3073862 - | glucarate dehydratase related protein TERM 4172 3075140 - 3075163 + g 79 -10.4 -3.85092 | gap 1, opp_overlap 3075134 ATTAAGCAACATGCT GTCATGTCCGG CGA CCGGA-ATGAC TTTCATATCAGTAAT UTI89_C3159 3076556 - 3075204 - | glucarate transporter TERM 4173 3076726 - 3076708 - R 75 -4.4 -4.93898 | overlap 3076671 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA yqcA 3077439 - 3076990 - | flavodoxin truC 3078239 - 3077457 - | tRNA pseudouridine synthase C yqcC 3078568 - 3078239 - | hypothetical protein TERM 4174 3078619 - 3078648 + r 81 -10.7 -3.51411 | opp_overlap 3078621, overlap 3078615 3078620 TAGCAGGAATAAAAA AAGGGAGCACTGT ATTC ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 4175 3078620 - 3078647 + r 87 -14.2 -2.70525 | opp_overlap 3078621, overlap 3078619 3078615 AGCAGGAATAAAAAA AGGGAGCACTGT ATTC ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 4176 3078646 - 3078621 - R 100 -17.7 -5.84381 | opp_overlap 3078620 3078619 3078615 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGTGCTCCC GGTTCGTTTCGCAGC syd 3079735 - 3079190 - | SecY interacting protein Syd TERM 4177 3080505 - 3080483 - g 71 -10.6 -2.86271 | opp_overlap 3080481 3080495 3080496, overlap 3080480 3080495 CCGTCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 3079803 - 3080651 + | 7-cyano-7-deazaguanine reductase ygdH 3080763 - 3082127 + | hypothetical protein TERM 4178 3082138 - 3082159 + TF 91 -10.1 -4.72556 | overlap 3082156 CATAATCTCCCCTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG UTI89_C3166 3084084 - 3082657 - | hypothetical protein sdaC 3082684 - 3083973 + | serine transporter TERM 4179 3083982 - 3084001 + gF 90 -12.8 -3.27786 | overlap 3083994 3083996 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 4180 3084808 - 3084788 - gH 72 -5.3 -4.4767 | opp_overlap 3084788 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA sdaB 3084031 - 3085398 + | L-serine dehydratase (deaminase), L-SD2 TERM 4181 3085679 - 3085668 - g 75 -7.2 -4.30576 | overlap 3085670 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG xni 3085420 - 3086265 + | exonuclease IX TERM 4182 3086318 - 3086352 + T 100 -14.3 -3.32963 | opp_overlap 3086328 3086331 TTTCATGCACTTATA TGCCGGATAAGACGC GGCTA GCGTCGCATCCGGCA TTATCACATCAGCGT fucO 3087521 - 3086370 - | L-1,2-propanediol oxidoreductase fucA 3088193 - 3087546 - | L-fuculose phosphate aldolase TERM 4183 3088417 - 3088384 - g 71 -3.3 -4.84274 | gap 1, overlap 3088375 TAACCACATTAAAAA TGACCGCTCTTAAGAA TAT TTATCAAAA-CGGTCA TTTTTCTACTCCTCC UTI89_C3172 3088383 - 3088520 + | hypothetical protein TERM 4184 3088929 - 3088946 + G 77 -6.3 -4.62957 | gap 1 ACAAATTTCCAGGCT GGCCTGAT CCA ATC-GGCC TTTTACTTTGGTTAT fucP 3088740 - 3090056 + | L-fucose transporter TERM 4185 3090110 - 3090099 - g 93 -2.2 -5.65513 | CAGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC TERM 4186 3090815 - 3090799 - g 71 -3 -4.82901 | gap 1, overlap 3090801 CTGGGCTGATAAAAA CTTCCGC TATG GCG-AAG ATGAAAATAACAAAC fucI 3090089 - 3091864 + | L-fucose isomerase TERM 4187 3091929 - 3091956 + F 86 -12.9 -3.01791 | overlap 3091931 ACAAGCAAGAGTGGT TAGCCGGATAA GCAATG TTATCCGGCTA TATTGCAGGAGCGAT TERM 4188 3091931 - 3091954 + F 76 -11.1 -3.06696 | overlap 3091929 AAGCAAGAGTGGTTA GCCGGATAA GCAATG TTATCCGGC TATATTGCAGGAGCG fucK 3091943 - 3093391 + | L-fuculokinase fucU 3093393 - 3093815 + | protein of fucose operon TERM 4189 3093811 - 3093801 - f 77 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATACCGG TERM 4190 3093828 - 3093848 + F 74 -9.6 -3.34043 | overlap 3093829 TAATCTCATACCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 4191 3093829 - 3093847 + F 84 -13.1 -2.60212 | overlap 3093828 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 4192 3094121 - 3094139 + G 72 -11.6 -2.52464 | opp_overlap 3094120 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 3093864 - 3094604 + | DNA-binding transcriptional activator FucR ygdE 3095748 - 3094648 - | putative RNA 2'-O-ribose methyltransferase ygdD 3096043 - 3095741 - | hypothetical protein TERM 4193 3096109 - 3096095 - R 76 -8.5 -3.88603 | AGCTACAAAAATGAA GCCGC TAATG GCGGC GAAAATCAGCATAAA gcvA 3097072 - 3096155 - | DNA-binding transcriptional activator GcvA TERM 4194 3097314 - 3097328 + rH 93 -10 -5.17576 | opp_overlap 3097313 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 4195 3097398 - 3097379 - RH 74 -10.7 -2.57423 | opp_overlap 3097379 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC TERM 4196 3097379 - 3097398 + rH 100 -10.7 -5.86332 | opp_overlap 3097379 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC UTI89_C3182 3097653 - 3097423 - | hypothetical protein UTI89_C3181 3097390 - 3097683 + | hypothetical protein UTI89_C3183 3097806 - 3099047 + | cysteine sulfinate desulfinase ygdK 3099047 - 3099490 + | hypothetical protein TERM 4197 3099499 - 3099536 + T 100 -12.7 -3.92542 | opp_overlap 3099499 3099500, overlap 3099500 3099502 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTACCCCTGAC TERM 4198 3099536 - 3099499 - T 100 -17.1 -3.59946 | opp_overlap 3099499 3099500 3099502, overlap 3099500 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTACCCCTGAC TERM 4199 3099500 - 3099535 + T 100 -16.2 -2.95204 | opp_overlap 3099500 3099499, overlap 3099499 3099502 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTACCCCTGA TERM 4200 3099535 - 3099500 - T 100 -18.4 -2.75647 | opp_overlap 3099499 3099500 3099502, overlap 3099499 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTACCCCTGA TERM 4201 3099502 - 3099533 + T 86 -13 -3.02639 | opp_overlap 3099500 3099499, overlap 3099500 3099499 TTAAGCACAGAACCA GGTCGGATAAGACG TTCG CGTCGCATCCGACC TGATTGTTTACCCCT ygdL 3100347 - 3099541 - | putative enzyme TERM 4202 3099612 - 3099601 - G 70 -5.8 -4.23707 | overlap 3099609 AGAAACCGCAACAAA GCCA AAAG TGGC GGTCACCATCGTCGC TERM 4203 3100387 - 3100367 - R 100 -12.6 -4.93365 | opp_overlap 3100367 CCTCAGAATTAAAAA GGGTGAGG TTACC CCTCACCC TGTCATATCCGTAAA TERM 4204 3100367 - 3100387 + r 82 -12.6 -2.8655 | opp_overlap 3100367 CCTCAGAATTAAAAA GGGTGAGG TTACC CCTCACCC TGTCATATCCGTAAA mltA 3101521 - 3100424 - | murein transglycosylase A TERM 4205 3102048 - 3102072 + H 93 -5 -5.54079 | gap 1, opp_overlap 3102048 TAGAATGCTGACAAA CCGCAAAGCTG CTAT TGGCTT-GCGG TTTTTTCGTTTTTAC UTI89_C3190 3102641 - 3103162 + | hypothetical protein TERM 4206 3103186 - 3103157 - f 74 -10.9 -2.64099 | overlap 3103156 GCGCCGCAGGAGAAC GTTTAACCCGAAC ACGT ATTCAGGTTAAAC CGGAGAAGAAAGGAT TERM 4207 3103373 - 3103361 - g 82 -9.1 -4.15006 | AGATTTATGGCAAAA CAGCG AAA CGCTG GCTGATGCCTCACCC TERM 4208 3104304 - 3104315 + G 70 -5.8 -4.2008 | CGCGAATTTGAATTT GCCA ACCT TGGC TTTATTCCGCTCTCT UTI89_C3191 3103215 - 3104759 + | hypothetical protein TERM 4209 3104799 - 3104830 + G 71 -9.4 -3.53012 | overlap 3104800 TTCATCGACCACTGT GGGCTGAGGGGACA TTCC TGTCCTCTCAGCAG TTTCAGCAGCAGGCC TERM 4210 3104800 - 3104829 + G 81 -12.9 -2.71712 | overlap 3104799 TCATCGACCACTGTG GGCTGAGGGGACA TTCC TGTCCTCTCAGCA GTTTCAGCAGCAGGC TERM 4211 3104958 - 3104976 + G 95 -11.7 -4.30576 | opp_overlap 3104958 CCGGAAAGCTGAAAA CGCAGGC AGTAC GCCTGCG TTTTGCTGATGGCAC TERM 4212 3104976 - 3104958 - g 95 -12.4 -4.24002 | opp_overlap 3104958 CCGGAAAGCTGAAAA CGCAGGCA GTA CGCCTGCG TTTTGCTGATGGCAC UTI89_C3192 3104777 - 3106114 + | hypothetical protein TERM 4213 3106131 - 3106120 - g 82 -3 -5.21709 | GCGCACATGAAAAAA GATA TGGA TATC AATATCGATGCGCTG UTI89_C3193 3106111 - 3106776 + | hypothetical protein UTI89_C3194 3106789 - 3108441 + | hypothetical protein UTI89_C3195 3109080 - 3108478 - | hypothetical protein UTI89_C3196 3108499 - 3108990 + | secreted protein Hcp TERM 4214 3108998 - 3109019 + gF 100 -14.5 -5.25699 | opp_overlap 3108995 CCGCCTGATAACTGC GGCAGACAG GAAA CTGTCTGCC TTTTTGTTGTGTGCT TERM 4215 3109023 - 3109080 + gF 71 -10.1 -2.78816 | gap 1 AAACTGTCTGCCTTT TTGT-TGTGTGCTTTGTCCAGTGCCG CAGGCAC CGGTACTGAGCAAAGCATACCCACAA TCTGGTGAAACCTGA TERM 4216 3109818 - 3109806 - g 100 -10.5 -4.66609 | opp_overlap 3109813, overlap 3109808 GACGTGACGGAAAAA GCCCG CAG CGGGC GAATCGACCCGGTAT TERM 4217 3109918 - 3109895 - g 81 -8.9 -4.40561 | overlap 3109892 TCGCCGCAAAAACAA CCCGATTCT GGTGGG AGAACCGGG GGTGGGCAAAACCGC TERM 4218 3110997 - 3110983 - g 77 -8.5 -4.07568 | TGCGGGCGGCTAAAA CCGGC CTCAC GCCGG AGAACGGCCCACAGG UTI89_C3197 3109182 - 3111827 + | ClpB protein TERM 4219 3111931 - 3111882 - g 85 -10.2 -4.22338 | gap 1, opp_overlap 3111897 ACCACAAGCTCAAAA TTCGCGGCCTG-AAAAGCCCG GTGGACGTG CTGACTTTTACAGGCCACGAA CAGCTCAGCTCACCC TERM 4220 3112054 - 3112099 + G 77 -10.4 -3.60234 | gap 1, opp_overlap 3112053 GCCCGTACAGGGAAT GCCGGTACAGACTGCCCTGCG CACCC TGCACGGC-GTCATTACCGGC TTTAAACATCTCTCA TERM 4221 3113743 - 3113724 - g 75 -5.6 -4.62336 | overlap 3113725 AGGTTACGCCAAAAA GCCTGCAG CTGT CCGCAGGA GAAAACATCATTAGC UTI89_C3198 3111839 - 3114319 + | hypothetical protein TERM 4222 3115288 - 3115305 + GF 77 -3.4 -5.03314 | TCTTAGGTCGTAATG CAGCTG AAATGG TAGCTG TTTTTTCCCAGTCGC UTI89_C3199 3114339 - 3116108 + | hypothetical protein UTI89_C3200 3116083 - 3116916 + | hypothetical protein UTI89_C3201 3116885 - 3117178 + | hypothetical protein UTI89_C3202 3117642 - 3117902 + | hypothetical protein UTI89_C3203 3117829 - 3119040 + | hypothetical protein TERM 4223 3119561 - 3119551 - gf 95 -6.8 -5.40474 | opp_overlap 3119560 ACCGCCTTAAAAAAA CTGC GCC GCAG CCGTCCGCTGGACGG TERM 4224 3119560 - 3119578 + GF 70 -10.2 -2.62616 | opp_overlap 3119551 AAAAAACTGCGCCGC AGCCGTCC GCT GGACGGCA TCATCTGGCCGCTGA TERM 4225 3119843 - 3119858 + GF 73 -10.4 -2.98493 | overlap 3119840 GCATGTCGCAACTGC TGGCGG ATAA CCGCCA TGATTTCCTGCTGCG TERM 4226 3120543 - 3120555 + GF 72 -4.7 -4.65895 | opp_overlap 3120543 TTCCCGCCCGGAAAA GGCCG ACG CTGCC TTTTTCAGTACCACG TERM 4227 3122364 - 3122322 - gf 70 -4 -4.62069 | gap 1, opp_overlap 3122328, overlap 3122324 GCTGGAGCTGAAAAA CTTCCGCCTGCCGGGACAG GTATTT CTGAC-CGGCAGGAGTATG AAGGATGCGGAAGAG UTI89_C3204 3119050 - 3122403 + | hypothetical protein UTI89_C3205 3122369 - 3124006 + | hypothetical protein TERM 4228 3124061 - 3124049 - f 74 -6.9 -4.37886 | overlap 3124052 TCAGGGGGGACAAAA CCACC TGC GGCGG GAAGATTATTGAAGG TERM 4229 3124237 - 3124251 + F 82 -9.2 -4.2123 | AGCCAGAGCAGTTGC CCGTGC AAG GCGCGG TTTATTGCGTCAATG TERM 4230 3124417 - 3124431 + F 70 -7.2 -3.98214 | opp_overlap 3124419 AATGTTAGTGTACAG GACATA CCT TATGTC TTTATCCTAAATAAT TERM 4231 3125396 - 3125376 - f 76 -6.2 -4.46652 | gap 1, overlap 3125384 3125389 TAAAGAAAAAGCAAA GGGGAATAC TGAA GT-TTCCCC TCCAGTGAAACCAGA TERM 4232 3125616 - 3125641 + G 77 -8.3 -4.08706 | overlap 3125620 AGAAAATGGTATTAC GCAGTGACGAC ATCT GTCGTCATTAC TTTGTGTGGTGGAGG TERM 4233 3125620 - 3125637 + G 77 -9.9 -3.66365 | overlap 3125616 AATGGTATTACGCAG TGACGAC ATCT GTCGTCA TTACTTTGTGTGGTG UTI89_C3206 3125577 - 3126218 + | hypothetical protein UTI89_C3207 3126499 - 3126918 + | hypothetical protein TERM 4234 3127423 - 3127448 + F 76 -4 -5.14563 | gap 1 GCACGCGATCCCTAT GTGGAGCGCCT GTTCG AGG-GCTTCGC TTTTTTAATGGGCCG TERM 4235 3129150 - 3129169 + F 70 -7 -4.08216 | opp_overlap 3129149 3129150, overlap 3129154 GGCAGTACCGACAAC CCCGCCGC CGAT GCGGTGCG TTTTCGCCCCCATCC TERM 4236 3129712 - 3129695 - f 74 -4.1 -5.00616 | GGGTCTGTCAAAAAA TTCACGC ATCA GCCTGAA AACGCGAACGCTGCT TERM 4237 3129815 - 3129852 + F 70 -6.9 -4.05033 | gap 1 TGGCTGGCTGCCCGG CGGGCAACTGCAC-AGCG ATT TGCTGGTGCTGCTGCGCG TTTATCTGGGCTGGC UTI89_C3208 3130072 - 3130608 + | hypothetical protein UTI89_C3209 3130612 - 3131040 + | hypothetical protein UTI89_C3211 3131742 - 3131590 - | hypothetical protein UTI89_C3210 3131040 - 3132416 + | hypothetical protein TERM 4238 3132660 - 3132684 + Tr 100 -11.5 -5.88197 | opp_overlap 3132660 TAGAATGCTGACAAA CCGCAATGTGT TCT ACAAATTGCGG TTTTTTTGTATTTAA TERM 4239 3132684 - 3132660 - TR 91 -11.5 -3.90328 | opp_overlap 3132660 TAGAATGCTGACAAA CCGCAATGTGT TCT ACAAATTGCGG TTTTTTTGTATTTAA UTI89_C3212 3133674 - 3132718 - | 2-hydroxyacid dehydrogenase TERM 4240 3133122 - 3133140 + g 78 -9.6 -3.86346 | opp_overlap 3133125, overlap 3133125 CTCCAGCTTTGTCAG CAACCTGA TAG TCGGGTTG TTTGTCAAAAGCTAA TERM 4241 3133707 - 3133688 - R 72 -7.8 -3.94188 | overlap 3133689 ACTCACTTCAAAGAA CGCCACCC CAAA AGATGGCG TGACCGGTTACTGTA UTI89_C3213 3134333 - 3133737 - | phosphosugar isomerase UTI89_C3214 3135511 - 3134336 - | beta-cystathionase TERM 4242 3135218 - 3135197 - G 85 -11.7 -3.65224 | opp_overlap 3135191 ATGCGATGTCAATAA CTCTATTGC TTTT GCAATAGAG TACATCACACTGGGG UTI89_C3215 3137091 - 3135511 - | PTS system, maltose and glucose-specific IIABC component UTI89_C3216 3137992 - 3137123 - | antiterminator TERM 4243 3137813 - 3137800 - G 100 -8.1 -5.36441 | TTCTGACATAAAAAA TCCGG TTAG CCGGA TGCTCAGGGACCGAC TERM 4244 3138001 - 3137956 - G 100 -13.5 -6.06723 | gap 1, opp_overlap 3137956 3137953 GGCTCCAAAAAAAAA GGCAAGGC-ACGTCAGAAGTAA TAA CTACTTCAAACATTGCCTTGCC TGATTTAACAGTTAC UTI89_C3217 3138031 - 3138183 + | hypothetical protein amiC 3139536 - 3138193 - | N-acetylmuramoyl-L-alanine amidase AmiC precursor TERM 4245 3138505 - 3138515 + g 81 -8.2 -4.4078 | opp_overlap 3138505 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTTACGCCAC TERM 4246 3138786 - 3138810 + g 70 -3.5 -4.61527 | TCAGAGAGCGCAGAC GGCGAGCTATT TGC AATACCACGTC TTTTTCGCGCGTTTT TERM 4247 3140970 - 3140955 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 3139678 - 3141009 + | N-acetylglutamate synthase TERM 4248 3141064 - 3141020 - T 84 -8.5 -4.30978 | opp_overlap 3141020, overlap 3141022 GGTAAGCGATGAAAA TCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCAGGCAA TTACGTTTATCCCCG RecD 3142897 - 3141071 - | exonuclease V subunit alpha TERM 4249 3141809 - 3141825 + g 79 -4.3 -5.00616 | opp_overlap 3141807 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 4250 3142601 - 3142579 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCGCC ACA GAGGATCATC GGCGTTGGTTCATCT RecB 3146448 - 3142897 - | exonuclease V subunit beta TERM 4251 3143043 - 3143028 - G 70 -6 -4.21954 | overlap 3143025 3143029 GGAACAGATAAATAA CGCCGC CAAA GTGGCG CTCATAGTCGTAATC TERM 4252 3143889 - 3143901 + g 76 -9.1 -3.75505 | AGGTACGAAGCCCTG CCGCA TCT TGCGG TTCTCCTTTTTGCAG TERM 4253 3145398 - 3145410 + g 74 -6.2 -4.57569 | overlap 3145397 3145405 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 4254 3145521 - 3145542 + g 76 -9.3 -3.76379 | CCTCAAACAGTGGAT GTCGCGGGG TTTC CCCCCCGGC TTTCGTGCGATCTTC TERM 4255 3146307 - 3146293 - G 71 -9.2 -3.53224 | overlap 3146304 CAGCGGGCGGGGAAA GGCGGC AGA ACCGCC TAGTCCAAGTAACAG TERM 4256 3146408 - 3146382 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptrA 3149320 - 3146432 - | protease III TERM 4257 3147062 - 3147073 + g 74 -5.8 -4.58395 | CAGTGCGGAGTCGGT GCTG TTAC CAGC TTTTTCAAAGATGAC TERM 4258 3148506 - 3148534 + g 84 -3.7 -5.28755 | overlap 3148501 3148507 3148514 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT recC 3152864 - 3149496 - | exonuclease V subunit gamma TERM 4259 3149885 - 3149873 - G 78 -5.5 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCACC ATTACCACCGCTGGC TERM 4260 3151909 - 3151891 - G 70 -4.4 -4.45083 | opp_overlap 3151894 GTCACATCGACAAAA GCGTCCAG CTC CTGGCTGC TCTCCAGGTCAGAAA ppdC 3153200 - 3152877 - | hypothetical protein ygdB 3153592 - 3153185 - | hypothetical protein TERM 4261 3153266 - 3153253 - G 74 -3.1 -5.00616 | CGCGTGGCGAAAAAA CAATG TTTC CATCG ATGACTTCGCCTGTT ppdB 3154176 - 3153589 - | hypothetical protein ppdA 3154613 - 3154143 - | hypothetical protein TERM 4262 3154776 - 3154757 - R 100 -10.7 -5.78622 | GGAGGGCAAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT thyA 3155592 - 3154798 - | thymidylate synthase TERM 4263 3155465 - 3155435 - G 72 -11.1 -3.09516 | TCGTGGATGATGGAA CGCAGGTGGCAAC GTTTA GTTGTCACCAGCG GGAATCCATCCTGCA lgt 3156474 - 3155599 - | prolipoprotein diacylglyceryl transferase ptsP 3158871 - 3156625 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein nudH 3159414 - 3158884 - | dinucleoside polyphosphate hydrolase UTI89_C3233 3159913 - 3159767 - | hypothetical protein TERM 4264 3160056 - 3160071 + H 77 -4.7 -5.04249 | TACACTGCGAATATT CAGCA CATAAT TGCTG TTTGTTTTTTAACCA TERM 4265 3160352 - 3160337 - g 76 -7.6 -4.27316 | opp_overlap 3160335 3160337 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCACT TERM 4266 3160710 - 3160728 + G 71 -3.1 -4.86731 | gap 1, overlap 3160717 CCGGGGCGAACGGAT TCTGACGC TGCC GCG-CGGA TTTTATTTGAAGAAG mutH 3160099 - 3160788 + | DNA mismatch repair protein ygdQ 3160857 - 3161570 + | putative transport protein UTI89_C3236 3161929 - 3161642 - | hypothetical protein ygdR 3161708 - 3161926 + | lipoprotein TERM 4267 3161955 - 3161931 - fH 80 -8.6 -4.20918 | opp_overlap 3161930 3161929, overlap 3161934 TTGAACGTTAACAAA TAAGGTCAGC ATCCG GCTGGCCTTA AGATTTTTCTCTTTC TERM 4268 3162860 - 3162850 - g 93 -8.2 -4.82855 | opp_overlap 3162849 3162847, overlap 3162852 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATCGC tas 3162034 - 3163074 + | putative aldo-keto reductase TERM 4269 3163076 - 3163103 + T 86 -12.8 -3.13403 | opp_overlap 3163077 3163081 3163093, overlap 3163081 ATCCTGCACCATAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC TERM 4270 3163102 - 3163077 - T 100 -16.3 -3.27475 | opp_overlap 3163076 3163081, overlap 3163081 3163093 TCCTGCACCATAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 4271 3163098 - 3163081 - T 93 -12.7 -3.43203 | opp_overlap 3163076 3163081, overlap 3163077 3163093 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 4272 3163081 - 3163098 + T 86 -12.7 -3.20348 | opp_overlap 3163081 3163077 3163093, overlap 3163076 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 4273 3163140 - 3163110 - T 73 -9 -3.45571 | opp_overlap 3163113, overlap 3163093 3163104 3163113 GGCGTTAAATATTAA TGACGGCGCTGC CAGATCC ACAGCGCCGTTA TTGCCAGCGCAAACA TERM 4274 3163113 - 3163137 + T 78 -10 -3.61398 | opp_overlap 3163093 3163113 3163110 3163104 GTTAAATATTAATGA CGGCGCTG CCAGATCCA CAGCGCCG TTATTGCCAGCGCAA TERM 4275 3163137 - 3163113 - T 75 -10.7 -2.8742 | opp_overlap 3163113, overlap 3163093 3163110 3163104 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG TTATTGCCAGCGCAA ygeD 3164299 - 3163106 - | hypothetical protein TERM 4276 3163636 - 3163623 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 3166451 - 3164292 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 4277 3166564 - 3166547 - H 100 -12.7 -5.75945 | opp_overlap 3166547 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACT TERM 4278 3166547 - 3166564 + H 86 -12.7 -3.14211 | opp_overlap 3166547 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACT TERM 4279 3166767 - 3166750 - H 100 -12.7 -6.07627 | opp_overlap 3166749 3166746 3166756 ACCGGCAAAAAAAAA CCTGCGC ATCT GCGCAGG CTGGTGTAATTCATG TERM 4280 3166966 - 3166986 + H 88 -11.1 -4.18494 | opp_overlap 3166964 ACAATGAAAACACGC CGCCCCTTG AAC CAACGGGCG TTTTCCGTAACACTG TERM 4281 3167291 - 3167305 + G 93 -3.6 -5.5604 | GGTCGAACAGGTGGC TTATCA CAC TGGTAA TTTTTTATTGATTGG galR 3167037 - 3168068 + | DNA-binding transcriptional regulator GalR lysA 3169337 - 3168075 - | diaminopimelate decarboxylase lysR 3169459 - 3170394 + | DNA-binding transcriptional regulator LysR ygeA 3171073 - 3170381 - | putative racemase TERM 4282 3171195 - 3171169 - R 100 -18.8 -5.30155 | CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGACGCC TERM 4283 3172411 - 3172390 - R 71 -7.9 -3.767 | overlap 3172402 CAGCCACCCATTAAA CAGCGCACC AATT GCTGCGCCG AGCATCATGCTACTG TERM 4284 3172677 - 3172659 - R 77 -4.6 -5.14477 | overlap 3172661 3172662 GACATAGTGAAAAAA TACGTGAA CAA TTCACACA GGTGTCAGGTCGGAA TERM 4285 3172912 - 3172895 - R 100 -12.7 -5.29782 | TACAGGTATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAG UTI89_C3245 3173696 - 3172935 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4286 3173539 - 3173524 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTTGATGG kduI 3174562 - 3173726 - | 5-keto-4-deoxyuronate isomerase TERM 4287 3174507 - 3174522 + g 72 -4.6 -4.65895 | overlap 3174509 AATTCATTGCGCAGC CCCTGG GTAT CCAGCG TTTTTGCGTGCGCAC TERM 4288 3174608 - 3174622 + r 73 -5 -4.60797 | opp_overlap 3174605 3174602 3174608 3174609, overlap 3174609 AATAGAAAACAACAA TGAAAC ACT GTTTCG TTTTCTCTATGAGGG TERM 4289 3174767 - 3174754 - R 80 -6.7 -4.78752 | ATGAGAATGGAAAAA TCAGG GAGC CCTGA AAAGGTATGTCGACT yqeF 3176033 - 3174849 - | acetyl-CoA acetyltransferase TERM 4290 3176117 - 3176104 - H 81 -3.1 -5.41746 | AATTGTTTAAAAAAA GTGAC TATT ATCAC AAAGGAAATACGCCT TERM 4291 3176326 - 3176309 - g 78 -8.5 -4.17316 | ATTTGGTCAAAAGAA GAAACTC TGTG GAGTTTC GCGCTCTACGGCACA UTI89_C3248 3176285 - 3177514 + | putative transporter protein TERM 4292 3177521 - 3177562 + T 100 -17.7 -4.35461 | gap 1, opp_overlap 3177539, overlap 3177522 TTTAGCTAATATCCG TTGTGGATGGTTCAAAATTG CTT CAATTTTGAACCATCC-CAG TTTTCATAATGTTCA TERM 4293 3177522 - 3177561 + T 100 -19 -3.20553 | gap 1, opp_overlap 3177539, overlap 3177521 TTAGCTAATATCCGT TGTGGATGGTTCAAAATTG CTT CAATTTTGAACCATCC-CA GTTTTCATAATGTTC ygeR 3178762 - 3177983 - | lipoprotein YgeR precursor TERM 4294 3179338 - 3179356 + G 88 -8.8 -4.65895 | opp_overlap 3179329, overlap 3179340 GAACAAGCCAGGAGT TTGCCGGG CGT CCTGGCGA TTTTTACCTGGGAAG TERM 4295 3180755 - 3180784 + G 76 -10.7 -3.38812 | gap 1, overlap 3180753 3180756 CACGTCAGAGCTATG TTGCCGCGCCTGCG CTG CGCAG-TGCGGCAC TGTTATTAAAAGAGA TERM 4296 3180756 - 3180783 + G 84 -14.2 -2.63073 | gap 1, overlap 3180755 3180753 ACGTCAGAGCTATGT TGCCGCGCCTGCG CTG CGCAG-TGCGGCA CTGTTATTAAAAGAG TERM 4297 3180844 - 3180803 - g 80 -5.2 -4.91977 | gap 1, overlap 3180834 TATTAAAAGAGAAAA TCATCGCTCAC-GCCGCAG TCATG CTACATCAGTCAGCGATGA ATCTGACCCTGATAA UTI89_C3251 3179152 - 3181449 + | xanthine dehydrogenase subunit XdhA ygeT 3181460 - 3182338 + | xanthine dehydrogenase subunit XdhB UTI89_C3253 3182335 - 3182814 + | xanthine dehydrogenase subunit XdhC TERM 4298 3182848 - 3182817 - T 93 -10.8 -4.5528 | opp_overlap 3182822, overlap 3182818 3182822 GAAAACGAAGTAAAA GGATATCCGGCCTG AATT CAGGCCGGATTCTC AGAGGTTATGTGTTT TERM 4299 3182846 - 3182818 - T 100 -14 -3.31541 | gap 1, opp_overlap 3182822, overlap 3182817 3182822 AAAACGAAGTAAAAG GATATCCGGCCTG AATT CAGGCCGGAT-TC TCAGAGGTTATGTGT TERM 4300 3182822 - 3182843 + T 100 -15.9 -3.31799 | opp_overlap 3182818 3182817 3182822 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCTCAGAGGTTATG TERM 4301 3182843 - 3182822 - T 100 -15.9 -3.14708 | opp_overlap 3182822, overlap 3182818 3182817 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCTCAGAGGTTATG ygeV 3184632 - 3182854 - | sigma-54-dependent transcriptional regulator ygeV TERM 4302 3185256 - 3185246 - g 70 -6.8 -4.07568 | GCCGCCGCGTTAAAA GCAC TGC GTGC TGAAAACATCTCAAC TERM 4303 3185427 - 3185403 - g 70 -6.3 -4.2331 | AAGGAAAATCACAAA TCGCTCACGGC GAA ACCGTGCGTGA AACCGCCAATATGAT TERM 4304 3185715 - 3185679 - g 100 -7.3 -5.58209 | overlap 3185681 TGAAAGGTAAAAAAA TCGCCATGACCTGGG CCTACTC CCCAAGCTATGGCAA ACCGCTCTCTGTACC ygeW 3185108 - 3186298 + | hypothetical protein TERM 4305 3186305 - 3186326 + F 93 -13.7 -3.24232 | overlap 3186303 GTGAAATAACCCCTC GGGCCGATC AGCT GGTCGGCCC TCTATTTCCAGAGGC TERM 4306 3186457 - 3186446 - g 70 -5.8 -4.22346 | overlap 3186435 3186439 3186436 3186447 CAAAGCCAGGCAAAA CTGG CACG CCAG TTCCACCAGAAAATT TERM 4307 3186644 - 3186632 - g 70 -4.9 -4.57569 | opp_overlap 3186640 TTATTGTGTGAAAAA TATCA TCT TGATA TCGAAACGCTGTCAT ygeX 3186356 - 3187552 + | diaminopropionate ammonia-lyase ygeY 3187610 - 3188821 + | peptidase TERM 4308 3188839 - 3188858 + F 100 -15 -4.71482 | ACTCTTCACTTATCC CCCTCCGG TTCG CCGGAGGG TTTTTGGAGTTTGCT TERM 4309 3188913 - 3188894 - g 79 -2.1 -5.28176 | overlap 3188896 CGTATTGATAAAAAA CGGCATT GTTGTT AATGCAG ATGGACAGGCGAAGC ygeZ 3188862 - 3190259 + | dihydropyrimidinase yqeA 3190307 - 3191239 + | carbamate kinase TERM 4310 3191245 - 3191272 + T 100 -12.7 -4.54727 | opp_overlap 3191246, overlap 3191246 TTGTCAGTAATTTAA AGGCCGGATGG GTAATA CCATCCGGCCA TTTTCATTTAAGCCA TERM 4311 3191271 - 3191246 - T 100 -16.2 -3.78329 | opp_overlap 3191246 3191245 TGTCAGTAATTTAAA GGCCGGATGG GTAATA CCATCCGGCC ATTTTCATTTAAGCC TERM 4312 3191246 - 3191271 + T 100 -16.2 -3.32354 | opp_overlap 3191246, overlap 3191245 TGTCAGTAATTTAAA GGCCGGATGG GTAATA CCATCCGGCC ATTTTCATTTAAGCC yqeB 3192905 - 3191280 - | hypothetical protein TERM 4313 3192949 - 3192935 - R 70 -9.2 -3.14683 | opp_overlap 3192931 ATATCCTTTCAGTAA CCCGGA ATA CCCGGG CCGCTAATTCACAAA yqeC 3193723 - 3192953 - | hypothetical protein TERM 4314 3193096 - 3193083 - G 74 -3.1 -4.89852 | overlap 3193084 TCACATTGAGAAAAA CGGTT AATG AACCA GACTCGCCGACAACC TERM 4315 3193147 - 3193130 - G 71 -9.1 -3.54424 | gap 1 CGGTACGTTTTTAAA CGCC-CCC TGA GGGTGGCG AACCAGCGCAACGAG TERM 4316 3193286 - 3193296 + g 72 -6.8 -4.2349 | opp_overlap 3193278 3193285 CATCACAGCAATCAC GCAG CAA CTGC TTTTAGGTATGCAAG ygfJ 3193827 - 3194405 + | hypothetical protein TERM 4317 3195839 - 3195849 + G 73 -4 -4.78107 | TGCCAGTCAGCTGAC TATC CGC GATA TTTTTGATACTGGTA TERM 4318 3196862 - 3196842 - g 71 -3.2 -4.84359 | opp_overlap 3196843 3196846, overlap 3196843 3196846 CCAGGCGTAGAAAAA GCAACGGT CGTTT ACCGTCGT TCACTGCAAGAGATG ygfK 3194727 - 3197825 + | putative selenate reductase subunit YgfK TERM 4319 3198243 - 3198253 + G 81 -6.8 -4.62471 | GGTCGCTCTCCACAT TGCG CAA CGCA TTTTTAAAAGTTGGC TERM 4320 3198418 - 3198433 + G 85 -11.8 -3.60098 | GGTGGAAGCTCATAT CGGCGC TCAC GCGCCG TTTACCGTGCCGGAT UTI89_C3264 3197828 - 3199156 + | putative chlorohydrolase/aminohydrolase TERM 4321 3199195 - 3199161 - f 74 -7.9 -4.06419 | overlap 3199163 3199164 CGCTGGCATAAATAA CAGCTCCCCTCTTCT TTCAG AGAAGAGGGGAAATT AAGGAAAGACGATGA TERM 4322 3199193 - 3199163 - f 78 -10.5 -3.62695 | overlap 3199161 3199164 CTGGCATAAATAACA GCTCCCCTCTTCT TTCAG AGAAGAGGGGAAA TTAAGGAAAGACGAT TERM 4323 3199192 - 3199164 - f 86 -14 -2.77135 | overlap 3199163 3199161 TGGCATAAATAACAG CTCCCCTCTTCT TTCAG AGAAGAGGGGAA ATTAAGGAAAGACGA ygfM 3199207 - 3199986 + | putative selenate reductase subunit YgfM xdhD 3199983 - 3202853 + | putative selenate reductase subunit YgfN TERM 4324 3202879 - 3202862 - f 84 -8.3 -4.39107 | opp_overlap 3202861 3202863, overlap 3202863 AATATAAGTAATAAA TGGCCGC TTCG GCGGCCT GTTTCTCTGTTTGAA TERM 4325 3202878 - 3202863 - f 83 -11.8 -3.21837 | opp_overlap 3202863 3202861, overlap 3202862 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA TERM 4326 3202863 - 3202878 + F 93 -11.8 -3.73323 | opp_overlap 3202862 3202863, overlap 3202861 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA ygfO 3202961 - 3204418 + | putative transport protein ygfP 3204313 - 3205752 + | guanine deaminase TERM 4327 3206791 - 3206775 - g 73 -11.5 -2.77182 | overlap 3206772 3206785 GTTTATATCGAATCA GCGGCAG GAA CCGCCGC CGGGGGGAAAACCGG UTI89_C3269 3205788 - 3207155 + | hypothetical protein TERM 4328 3207185 - 3207160 - T 78 -11.1 -3.1352 | opp_overlap 3207161, overlap 3207158 3207156 GGGCAATCTAATAGA TTCTCCGCGCC TTTC AGCGCGGAGAT TTCTTTCACAGAGGA TERM 4329 3207161 - 3207184 + T 100 -13.9 -4.41348 | opp_overlap 3207160 3207158 3207156 GGCAATCTAATAGAT TCTCCGCGC CTTTCA GCGCGGAGA TTTCTTTCACAGAGG ygfS 3207682 - 3207191 - | putative electron transport protein YgfS ygfT 3209613 - 3207679 - | putative oxidoreductase Fe-S binding subunit TERM 4330 3209114 - 3209127 + g 78 -8.1 -4.30844 | CTGCGAGATGGCTGA GCGTC TGAT GACGC TTTTCCTGCTGCCGT TERM 4331 3209880 - 3209896 + H 83 -10.9 -3.60661 | GTTCTCTTCTCATTT TCGTGGT TTA ACCACGA TTATGTGATTGCCTC ygfU 3209905 - 3211482 + | putative purine permease YgfU UTI89_C3273 3211466 - 3211609 + | hypothetical protein UTI89_C3274 3211732 - 3212280 + | isopentenyl-diphosphate delta-isomerase TERM 4332 3212302 - 3212285 - Tf 100 -10.5 -5.64421 | opp_overlap 3212285 AGCTTAAATAAAAAA CCCCGAC GGTT GCCGGGG TTGTGAGCATAACGT lysS 3213840 - 3212323 - | lysyl-tRNA synthetase TERM 4333 3212404 - 3212358 - Gf 70 -7.3 -3.9644 | gap 1, overlap 3212399 CCGGGAACAGAATAA CGTCGCGGATGGTATGGCTGTT GGTG AACAGCATTACCATACG-GTCG ATACCAATTCCCAGA UTI89_C3276 3212440 - 3213855 + | hypothetical protein TERM 4334 3215017 - 3214991 - TR 85 -11.7 -3.30903 | gap 1, opp_overlap 3214991 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG TERM 4335 3214991 - 3215017 + Tr 100 -11.7 -5.24129 | gap 1, opp_overlap 3214991 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG recJ 3216772 - 3215039 - | ssDNA exonuclease RecJ TERM 4336 3216173 - 3216161 - G 70 -4.7 -4.58395 | CTGATCGCGCAAAAA GGTGC GCA GCGCC AGCATCAGATAAAAC dsbC 3217488 - 3216778 - | thiol:disulfide interchange protein DsbC TERM 4337 3216981 - 3216991 + g 84 -4 -5.19879 | CTGCCATCACATCAT CAAA CGC TTTG TTTTTATCTTTCGCA xerD 3218409 - 3217513 - | site-specific tyrosine recombinase XerD fldB 3218521 - 3219042 + | flavodoxin FldB TERM 4338 3219049 - 3219078 + T 95 -8.5 -5.20783 | TACGCCTGATGTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TTTTTATCTTTGCGT ygfX 3219489 - 3219082 - | hypothetical protein ygfY 3219736 - 3219470 - | hypothetical protein UTI89_C3283 3219711 - 3219902 + | hypothetical protein ygfZ 3219979 - 3220959 + | putative global regulator TERM 4339 3221004 - 3220961 - T 79 -8.9 -3.92324 | gap 1, opp_overlap 3220959 3220962 3220963 3220966 3220996, overlap 3220962 CGCTGGAAGAGTAAA TCTCTGTATCGCATCAGGCA TTTAT CGCCTGATGCGACACTG-GT GTGTCTTTTCAGGCC TERM 4340 3221003 - 3220962 - T 82 -12.4 -2.95073 | gap 1, opp_overlap 3220962 3220959 3220963 3220966 3220996, overlap 3220961 GCTGGAAGAGTAAAT CTCTGTATCGCATCAGGCA TTTAT CGCCTGATGCGACACTG-G TGTGTCTTTTCAGGC TERM 4341 3220963 - 3221003 + T 83 -11.9 -3.26779 | opp_overlap 3220962 3220961, overlap 3220962 3220959 3220966 3220996 CTGGAAGAGTAAATC TCTGTATCGCATCAGGC ATTTATC GCCTGATGCGACACTGG TGTGTCTTTTCAGGC TERM 4342 3220966 - 3221000 + T 87 -14.4 -2.80859 | opp_overlap 3220962 3220961, overlap 3220963 3220962 3220959 3220996 GAAGAGTAAATCTCT GTATCGCATCAGGC ATTTATC GCCTGATGCGACAC TGGTGTGTCTTTTCA TERM 4343 3220996 - 3221009 + T 70 -6.7 -4.09685 | opp_overlap 3220962 3220961, overlap 3220966 3220963 3220962 3220959 TTTATCGCCTGATGC GACAC TGGT GTGTC TTTTCAGGCCTACAA UTI89_C3285 3221695 - 3221036 - | putative oxidoreductase yqfB 3222170 - 3221859 - | hypothetical protein bglA 3222191 - 3223648 + | 6-phospho-beta-glucosidase BglA TERM 4344 3223788 - 3223775 - T 91 -9.5 -4.8143 | opp_overlap 3223775 TTAACAAGCGAAAAA GGCGC CGAA GCGCC TTTATAAGATAGTCG TERM 4345 3223775 - 3223788 + T 81 -9.5 -3.90318 | opp_overlap 3223775 TTAACAAGCGAAAAA GGCGC CGAA GCGCC TTTATAAGATAGTCG gcvP 3226687 - 3223814 - | glycine dehydrogenase gcvH 3227197 - 3226805 - | glycine cleavage system protein H TERM 4346 3227241 - 3227221 - R 70 -8.9 -3.16667 | overlap 3227219 3227218 CAAAAAAGTAAATCA CGCGACGGC TTT GCCGTTACG CACAAAAACAGGTTT gcvT 3228312 - 3227218 - | glycine cleavage system aminomethyltransferase T TERM 4347 3227684 - 3227703 + g 71 -2.8 -4.8622 | gap 1 CCAGCTTCCACCAGC GCGCGCC AGAAATC GGC-CGC TTTTTCATTGGGCAG UTI89_C3291 3228475 - 3228320 - | hypothetical protein TERM 4348 3228716 - 3228693 - R 87 -10.3 -4.39386 | overlap 3228687 TTCAAATGAGGAAAA TCTCCCGGC GAAAAA ACCGGGAGA TGAAAGTGTGATGGG visC 3229962 - 3228760 - | hypothetical protein TERM 4349 3229362 - 3229374 + g 73 -9.1 -3.67775 | opp_overlap 3229350 AAACCTGCCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 3231163 - 3229985 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3232485 - 3231160 - | proline aminopeptidase P II TERM 4350 3232418 - 3232404 - G 75 -5.6 -4.72272 | opp_overlap 3232404 3232408, overlap 3232405 3232407 3232408 CTGGTGCAGCAAAAA TCAGCG CGG CGCTGC CGGGTTGCATTTGCT TERM 4351 3232417 - 3232405 - G 71 -9.1 -3.43042 | opp_overlap 3232404 3232408, overlap 3232404 3232407 3232408 TGGTGCAGCAAAAAT CAGCG CGG CGCTG CCGGGTTGCATTTGC ygfB 3233095 - 3232511 - | hypothetical protein UTI89_C3296 3233120 - 3233308 + | hypothetical protein TERM 4352 3233483 - 3233464 - gf 77 -3.4 -5.08601 | overlap 3233471 TTAGCGCAAGAAAAA GCGAAGAC TCGT GACTACGC GGCAAGTATGGAACA ygfE 3233257 - 3233586 + | Z-ring-associated protein TERM 4353 3234377 - 3234366 - g 83 -5.8 -4.9218 | opp_overlap 3234367, overlap 3234367 CAGTTAGTAGAAAAA CTCC CAGT GGAG AAATGGGATATTCCA ygfA 3233688 - 3234434 + | putative ligase TERM 4354 3234612 - 3234631 + T 87 -11.4 -3.66178 | ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 4355 3234776 - 3234806 + T 74 -8.2 -4.07568 | opp_overlap 3234780, overlap 3234780 TGGAGAAGGGATAAA AAAACGGGCAAGTC AGT GACCTGCCCGTTAA TTTTCAGAGAAGGGG TERM 4356 3234802 - 3234780 - T 100 -15.6 -5.66684 | opp_overlap 3234780 3234776 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA TERM 4357 3234780 - 3234802 + T 100 -13.4 -3.66908 | opp_overlap 3234780, overlap 3234776 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA serA 3236056 - 3234824 - | D-3-phosphoglycerate dehydrogenase TERM 4358 3235488 - 3235501 + g 72 -4.5 -4.70515 | overlap 3235487 3235489 TGTACCTGAGTGGCG TTGCC CAGC GGCAG TTTGTTTTCAATATC TERM 4359 3236141 - 3236123 - R 77 -3.2 -5.27399 | overlap 3236126 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCGA TERM 4360 3236138 - 3236126 - R 73 -4.9 -4.69962 | overlap 3236123 CATATCAAAAAATAA TATTG CGG CAATA TGAACGTTTGCGTCG TERM 4361 3236285 - 3236311 + r 78 -11.6 -2.91873 | opp_overlap 3236278, overlap 3236282 AATGAATAGAATTTT TTTAACGGGGGA GGT TCCCCCGTCAGA TCATTTCACAATAGT rpiA 3237043 - 3236312 - | ribose-5-phosphate isomerase A TERM 4362 3236398 - 3236420 + g 72 -7 -4.20531 | AACCAACAGTCACCA CGCCAGGAAT CGC ATTTATGGCG TTTTCCATCGCTATC yqfE 3237305 - 3237027 - | hypothetical protein iciA 3237398 - 3238291 + | chromosome replication initiation inhibitor protein TERM 4363 3238329 - 3238301 - f 100 -14.8 -3.80114 | opp_overlap 3238304, overlap 3238304 GATTAATCCATCAAA TAACGCCTGATA GCACA TATCAGGCGTTA TCCTCACTTCTTTTT TERM 4364 3238326 - 3238304 - f 93 -12.1 -4.02571 | opp_overlap 3238304, overlap 3238301 TAATCCATCAAATAA CGCCTGATA GCACA TATCAGGCG TTATCCTCACTTCTT TERM 4365 3238304 - 3238326 + F 88 -12.1 -3.45434 | opp_overlap 3238304 3238301 TAATCCATCAAATAA CGCCTGATA GCACA TATCAGGCG TTATCCTCACTTCTT TERM 4366 3238928 - 3238949 + G 74 -5.9 -4.57353 | gap 1, overlap 3238927 GATGACCATGAATGG CG-CAGTGCT ACC AGTACTGGCG TTTTATATCGTCGCC TERM 4367 3239325 - 3239335 + G 70 -6.8 -4.06419 | opp_overlap 3239312 AACGCCGCCATGTTG CGTG CGG CACG TTATTTATGGAGCGA UTI89_C3303 3238494 - 3239549 + | hypothetical protein TERM 4368 3239550 - 3239606 + T 83 -12.6 -3.0682 | TCGATGCTGGGTTAA TGGTTTGTCCCGTCACGAT-CTTCAGCA ATA TGCTGAAGCATCGTGGCGGTATAA-CGA TGATTTCTGATTGAA ygfI 3240442 - 3239546 - | transcriptional regulator YgfI TERM 4369 3240567 - 3240597 + r 74 -10.5 -3.19602 | gap 1, opp_overlap 3240556 3240566 3240565 3240569, overlap 3240565 AATATCGGGTAAAGG CAT-TAGCCCGACG AATA CGTCGGGCTACAAG TATTAATGTGCAGCA TERM 4370 3240594 - 3240569 - R 84 -13.3 -2.64472 | opp_overlap 3240567 3240565, overlap 3240556 3240566 3240565 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAGTATTAATGTGCA yggE 3241340 - 3240600 - | hypothetical protein yggA 3242065 - 3241433 - | arginine exporter protein TERM 4371 3242195 - 3242170 - R 85 -11.9 -3.33839 | opp_overlap 3242168, overlap 3242168 AAAACTAATAAGAGA GAGGCCAGAGA GTAT TATCTGGCCTC AGCGTTGATTACGCA yggB 3243064 - 3242204 - | mechanosensitive channel MscS TERM 4372 3243230 - 3243214 - R 100 -11.5 -5.40072 | TTTTGGCGAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fba 3244418 - 3243255 - | fructose-bisphosphate aldolase TERM 4373 3244518 - 3244544 + r 95 -7.3 -5.37865 | gap 1, opp_overlap 3244522, overlap 3244519 3244522 TAAAAGCGCGCTGAA ACA-AGGGCAGG TTTC CCTGCCCTGTGA TTTTTTACTTCTTAG TERM 4374 3244519 - 3244543 + r 85 -10.8 -3.81092 | gap 1, opp_overlap 3244522, overlap 3244518 3244522 AAAAGCGCGCTGAAA CA-AGGGCAGG TTTC CCTGCCCTGTG ATTTTTTACTTCTTA TERM 4375 3244539 - 3244522 - R 100 -12.7 -3.90922 | opp_overlap 3244522 3244519 3244518 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT TERM 4376 3244522 - 3244539 + r 90 -12.7 -3.27687 | opp_overlap 3244522, overlap 3244519 3244518 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT pgk 3245775 - 3244549 - | phosphoglycerate kinase epd 3246865 - 3245762 - | erythrose 4-phosphate dehydrogenase UTI89_C3311 3247153 - 3247584 + | hypothetical protein TERM 4377 3247838 - 3247887 + G 71 -9.3 -3.51411 | gap 2 GCCGCCGCATTTGCG CCCG-TCGCGATGGTCA-TCGGC CTGGTC GCCGGTTGGCTGGCGCGAGCGGG TTGGTTTCGCACCCT UTI89_C3312 3247607 - 3248185 + | hypothetical protein UTI89_C3313 3248186 - 3248893 + | hypothetical protein TERM 4378 3248967 - 3248979 + F 71 -7.7 -3.72576 | overlap 3248964 CTATGTCAAACCGGG GATGG TCG CCATC TTTGGTGACAACGGC TERM 4379 3249321 - 3249307 - gf 73 -10 -3.03124 | CGTCACCCGGCAACA CTCTCC GGT GGAGAG ACACAGCGTGTGGTC UTI89_C3314 3249022 - 3249558 + | putative ATP-binding protein of ABC transport system TERM 4380 3249780 - 3249767 - gT 78 -5.2 -4.7657 | opp_overlap 3249778, overlap 3249769 GAAAAACCTGAAAAA CCGC CAGCGC GCGG CAAAGATTGGCGTAC TERM 4381 3250111 - 3250094 - gT 70 -6.9 -4.08064 | overlap 3250081 AAGCTGGCTGGAAAA GTGCCGC CAGC GAGGCAC GAGCGTCGTAGCAAT TERM 4382 3250133 - 3250156 + GT 81 -9.6 -4.11805 | opp_overlap 3250129 CGTAGCAATCAGTCA TGACGCCG CATTTACC CGGCGTCA TTTCTCTCGTGTGGT UTI89_C3315 3249519 - 3250229 + | putative ATP-binding protein of ABC transport system frcK 3250914 - 3250201 - | putative fructose transport system kinase TERM 4383 3250390 - 3250364 - G 77 -12.2 -2.78384 | opp_overlap 3250365 TTGCGCCCCACCAGA CGCTCCCGCAAC GCA GATGCGGGAGCT TTGATAAAGATCGAG TERM 4384 3250365 - 3250389 + g 100 -15.7 -3.73775 | opp_overlap 3250364 TGCGCCCCACCAGAC GCTCCCGCAAC GCA GATGCGGGAGC TTTGATAAAGATCGA yggD 3251420 - 3250911 - | putative DNA-binding transcriptional regulator UTI89_C3318 3251757 - 3251569 - | hypothetical protein TERM 4385 3251699 - 3251718 + g 87 -13.6 -3.05384 | overlap 3251701 CAGCCGGTTTGCGGC CAGGCAGC CAAC GCTGCCTG TTCCGTAACGCGAAA UTI89_C3319 3253031 - 3251754 - | putative oxidoreductase cmtA 3254434 - 3253046 - | PTS system, mannitol (cryptic)-specific IIBC component cmtB 3254905 - 3254462 - | putative mannitol phosphotransferase subunit EIIA UTI89_C3322 3255282 - 3256190 + | SPFH domain-containing protein TERM 4386 3256213 - 3256196 - T 100 -14.1 -5.65513 | TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTGAGATTGATAGCA TERM 4387 3256393 - 3256364 - T 89 -12.1 -3.62046 | opp_overlap 3256370 GCACTTTGCCAACAA TCTGAAGGGCCGC ATTT GCGGCCCTTCTCA CAAAGCATCTTACCG TERM 4388 3256370 - 3256387 + T 100 -14.1 -3.28924 | opp_overlap 3256364 TGCCAACAATCTGAA GGGCCGC ATTT GCGGCCC TTCTCACAAAGCATC tktA 3258401 - 3256410 - | transketolase TERM 4389 3258096 - 3258112 + g 83 -10.1 -4.13945 | opp_overlap 3258095, overlap 3258097 TGCGGTGTAACCCAC TTCCGGG TGA CCCGGAG TTTTCGAGTGCAGCT TERM 4390 3258097 - 3258111 + g 75 -11.4 -3.08046 | opp_overlap 3258095, overlap 3258096 GCGGTGTAACCCACT TCCGGG TGA CCCGGA GTTTTCGAGTGCAGC TERM 4391 3258831 - 3258820 - g 81 -4.4 -5.0538 | GCGCAGGTGAAAAAA CTGA GCGA TCAG GCATGCCAGGAGATG yggG 3258460 - 3259437 + | putative metalloprotease YggG speB 3260561 - 3259641 - | agmatinase TERM 4392 3260194 - 3260184 - G 72 -6.8 -4.1822 | CGGCAGCGTAACAAA GTGG TCA CCAC CGAAGGAGAGCATAC TERM 4393 3260521 - 3260509 - G 77 -3.4 -5.03314 | opp_overlap 3260518 GGCAGGCGTAAAAAA CCAA AGGCG TTGG AAACCAGTGAGTTAT TERM 4394 3260597 - 3260629 + r 100 -14.9 -3.32997 | opp_overlap 3260597, overlap 3260592 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGTGAAAC TERM 4395 3260629 - 3260597 - R 100 -14.9 -5.71712 | opp_overlap 3260597 3260592 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGTGAAAC UTI89_C3326 3261428 - 3260697 - | hypothetical protein TERM 4396 3261560 - 3261521 - R 100 -13.6 -5.1383 | overlap 3261525 3261549 AAGAATATATAAAAA GAAAGCGGGGCGATTTAC TTAA ATAAATCGCCCCGCCAGC GGAATAATCTTAATT TERM 4397 3261556 - 3261525 - R 100 -19.6 -5.02777 | overlap 3261521 3261549 ATATATAAAAAGAAA GCGGGGCGATTTAC TTAA ATAAATCGCCCCGC CAGCGGAATAATCTT speA 3263562 - 3261574 - | arginine decarboxylase TERM 4398 3261879 - 3261869 - G 81 -6.8 -4.59342 | overlap 3261871 CCGACCATAAAGAAA CCGA GCA TCGG CGGATTCTCCGGATC yqgB 3263705 - 3263559 - | hypothetical protein TERM 4399 3263767 - 3263750 - H 87 -8.5 -4.52703 | opp_overlap 3263740 3263762, overlap 3263740 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC TERM 4400 3264006 - 3264030 + G 79 -2.2 -5.27335 | gap 1, overlap 3264010 ACCCGGCTGGAAGTG GCAACACGA AAGAAACG TCGTGT-GC TTTTTATTTAAGCCG yqgC 3263826 - 3264041 + | hypothetical protein TERM 4401 3264044 - 3264054 + T 79 -8.2 -4.36914 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA yqgD 3264304 - 3264038 - | hypothetical protein TERM 4402 3264821 - 3264809 - g 91 -9.1 -4.59853 | TGAAGTGCGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 4403 3265420 - 3265408 - g 72 -5.5 -4.57482 | opp_overlap 3265408 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGTGA metK 3264345 - 3265499 + | S-adenosylmethionine synthetase TERM 4404 3265540 - 3265522 - f 88 -11.7 -3.53444 | opp_overlap 3265522 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4405 3265522 - 3265540 + F 100 -11.7 -5.48213 | opp_overlap 3265522 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4406 3265855 - 3265874 + F 78 -6.5 -4.68994 | opp_overlap 3265835, overlap 3265835 GTAAGCGATTACACT GATGTGA TTTGCT TCACATC TTTTTACGTCGTACT galP 3265924 - 3267330 + | galactose-proton symporter TERM 4407 3267483 - 3267470 - g 70 -4.5 -4.56597 | overlap 3267471 3267472 CGCCTGCGGGAAAAA CTCGC CCAG GCGAA CCTGAAGCTAGGGCG sprT 3267407 - 3267904 + | hypothetical protein endA 3267996 - 3268706 + | endonuclease I precursor TERM 4408 3268754 - 3268776 + F 71 -4.7 -4.71061 | opp_overlap 3268755, overlap 3268755 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT TERM 4409 3269484 - 3269498 + G 76 -7.8 -4.17089 | GCTCACCGCCATTAC CGCGCT ACA AGTGCG TTTTGGCGATTTGGG yggJ 3268786 - 3269517 + | hypothetical protein TERM 4410 3270419 - 3270439 + G 74 -11.2 -3.1552 | opp_overlap 3270417, overlap 3270417 AGATTGAAGCAGAGT TTCCGGTG TCGAT CACCGGAA TGTTAATGGATGCCA gshB 3269530 - 3270480 + | glutathione synthetase yqgE 3270517 - 3271152 + | hypothetical protein TERM 4411 3271523 - 3271506 - g 76 -7.7 -4.15044 | opp_overlap 3271519 CGGGCGCTCAACAAA GGCAAAG TCGA CTCTGCC TCTGCGGTTATTATT UTI89_C3338 3271152 - 3271568 + | Holliday junction resolvase-like protein yggR 3272797 - 3271742 - | hypothetical protein TERM 4412 3272789 - 3272810 + Gg 83 -12.3 -3.28791 | GGGACAAAATCTCAG CGGCTGCAA CGCG TTGCGGCCG TTCTCCAGAAGAAAT TERM 4413 3272873 - 3272854 - gH 83 -5.7 -5.13722 | overlap 3272855 GTCAGTAAAACAAAA CCTGCGA GCGCCA TCGCAGA AGCCATTGATGCCGG TERM 4414 3273020 - 3273008 - gH 72 -4.7 -4.65916 | opp_overlap 3273011, overlap 3272975 3273009 TGCAGTCTAATAAAA GCCGC CTG GTGGC AGAGCATTTCGACTG TERM 4415 3273380 - 3273367 - gH 72 -9.5 -3.14468 | TCGGACGATATGGAA GCCGC CATT GCGGC AGGTAGCACGATGGT yggS 3272740 - 3273444 + | hypothetical protein yggT 3273462 - 3274028 + | putative resistance protein TERM 4416 3274250 - 3274235 - g 70 -3.9 -4.65895 | GTGGTGATTGAAAAA GGCGA ACTTGG CCGCC ACAAACAAATTAAAA yggU 3274013 - 3274315 + | hypothetical protein TERM 4417 3274559 - 3274582 + G 77 -10.2 -3.65046 | overlap 3274551 AGATGCGCTGGGTGG CGCGCCGGGT ATTT ACTCCGCGCG TTATTCCGGTGAAGA yggV 3274323 - 3274916 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 4418 3275771 - 3275759 - g 72 -6.2 -4.30576 | opp_overlap 3275757 3275759 TGCGTACCACCAAAA CGCG TCATC CGCG TGGTTTTATGCAGGG yggW 3274909 - 3276045 + | coproporphyrinogen III oxidase TERM 4419 3276097 - 3276047 - T 79 -9.8 -3.72576 | gap 1, overlap 3276048 TTCTGGCGGAGTAAA TTTG-TATTGCCGGATGCGGCGT GCGTGT ACGCAGCATCCGGCAACAACTCA TGCGTCATCGCAAAA TERM 4420 3276093 - 3276048 - T 79 -12.1 -2.83403 | gap 2, overlap 3276047 TCTGGCGGAGTAAAT TTGTATTGCCGGATGCGGCGT GCGTGT ACGCAGCATCCGGCAA--CAA CTCATGCGTCATCGC yggM 3277121 - 3276114 - | hypothetical protein TERM 4421 3276999 - 3277011 + g 71 -3.3 -4.76892 | opp_overlap 3276999 ATCAAGCTTGAGAAT GCCGT GAT ACTGC TTTTTGAATTGATCT TERM 4422 3277230 - 3277210 - R 100 -14.7 -3.73068 | opp_overlap 3277206 GTCTGAAGTGAATAA GCCCCGGCA CGA TACCGGGGC GAAGTGATTAGTACT ansB 3278284 - 3277238 - | L-asparaginase II TERM 4423 3277587 - 3277573 - G 83 -10 -4.09117 | opp_overlap 3277553 3277572 3277573 CGTAGTTATAAACAA TGCCGA CTT TCGGCA GTTCATTCAGCTTAG TERM 4424 3278444 - 3278422 - R 80 -9.2 -4.12315 | opp_overlap 3278422 AAACGAAGAATTAAA CGGCATAAAA AAG TATTATGCCG TCTTAAAATAGAGGA yggN 3279179 - 3278460 - | hypothetical protein TERM 4425 3278537 - 3278556 + g 77 -6.4 -4.63184 | opp_overlap 3278536 CATCTTTGCCAAACT GCTGGAAA TCTT TTTCCTGC TTTTTCCACTCGGTT TERM 4426 3279108 - 3279086 - G 73 -12 -2.82623 | overlap 3279083 3279088 GCGGGCTGACAATCA CATCGTCACG CGG CGTGACGCTG CACTGGTAGTCGGCG TERM 4427 3279150 - 3279166 + g 74 -8 -4.12188 | opp_overlap 3279149 3279150 TGCCGTCACTGAAAG TGCTGC CGCCA GCAGCA TTTTGCGCATCATAG TERM 4428 3279223 - 3279200 - R 87 -8.8 -4.44667 | overlap 3279203 TCCCTCAAGAACAAA TCAGGCCAGC ATTT GCTGGCCCCA GATTGATAACAAAGT TERM 4429 3279220 - 3279203 - R 86 -12.7 -3.19055 | overlap 3279200 CTCAAGAACAAATCA GGCCAGC ATTT GCTGGCC CCAGATTGATAACAA UTI89_C3348 3279340 - 3279200 - | hypothetical protein yggL 3279689 - 3279363 - | hypothetical protein trmB 3280408 - 3279689 - | tRNA (guanine-N(7))-methyltransferase TERM 4430 3281397 - 3281374 - g 70 -6 -4.24342 | gap 1, opp_overlap 3281387 3281388, overlap 3281375 TTGCCGATGAAGAAA GTTTGCGGCAG TGG CTGGCGCA-AC GACAGATTTCTGCCG mutY 3280539 - 3281621 + | adenine DNA glycosylase UTI89_C3352 3281891 - 3281598 - | hypothetical protein TERM 4431 3281831 - 3281811 - Gg 73 -4 -4.78981 | overlap 3281825 ATTAATGAAAAGAAA CTCAACAT GATGA ATGCCGAG CACCGCAAGCTGCTG yggX 3281649 - 3281924 + | hypothetical protein TERM 4432 3281955 - 3281928 - fH 100 -6.3 -5.8096 | gap 1, opp_overlap 3281930, overlap 3281930 3281931 GATAAAAAATAAAAA CAGT-GCCGGAG CACGC CTCCGGCAACTT GCATAAAAACAAACA TERM 4433 3281952 - 3281930 - fH 88 -9.1 -4.48934 | opp_overlap 3281930, overlap 3281928 3281931 TAAAAAATAAAAACA GTGCCGGAG CACGC CTCCGGCAA CTTGCATAAAAACAA TERM 4434 3281951 - 3281931 - fH 86 -12.6 -3.257 | opp_overlap 3281930, overlap 3281930 3281928 AAAAAATAAAAACAG TGCCGGAG CACGC CTCCGGCA ACTTGCATAAAAACA mltC 3281986 - 3283068 + | murein transglycosylase C TERM 4435 3283103 - 3283078 - f 70 -9 -3.19653 | overlap 3283079 CGATAATTCCACTAA CCGCCCCTGA CGATGC TCAGGGGCAA AAATGTTATCCACAT TERM 4436 3283102 - 3283079 - f 70 -10.3 -2.51471 | overlap 3283078 GATAATTCCACTAAC CGCCCCTGA CGATGC TCAGGGGCA AAAATGTTATCCACA nupG 3283222 - 3284526 + | transport of nucleosides, permease protein TERM 4437 3284531 - 3284574 + T 100 -14 -3.34013 | opp_overlap 3284542, overlap 3284542 TTAGCCACTAATTAC GCAAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTATTC TTACTTCAACACATA TERM 4438 3284563 - 3284542 - T 100 -11.5 -5.30616 | opp_overlap 3284542 3284531 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC TERM 4439 3284542 - 3284563 + T 100 -13.7 -5.95946 | opp_overlap 3284542, overlap 3284531 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC speC 3286710 - 3284575 - | ornithine decarboxylase TERM 4440 3284884 - 3284895 + g 76 -3.6 -4.92363 | CGGGAAACTCTGCTG GCGG AACA TCGC TTTTTGTAGGTCTTT TERM 4441 3285616 - 3285627 + g 82 -3 -5.29782 | ACGCGCCTGTCCACG GATA TGGT TATC TTTTTTATGGATCTG TERM 4442 3286303 - 3286318 + g 77 -6.8 -4.56597 | opp_overlap 3286303 GAAATCGTAAAAATG GCGTCC GGCA GGATGC TTTTTAAAGAACGCA TERM 4443 3286552 - 3286531 - G 90 -7.3 -5.0916 | overlap 3286548 TTCGGAATACAAAAA CACCGGT AGATGAAA ACCGGTG CGCTTAAGCAACGCA TERM 4444 3286731 - 3286721 - R 76 -8.2 -4.21936 | TTCATAAGCGCAAAA CCCG TTT CGGG GAAGTAAGAATACCG TERM 4445 3286815 - 3286845 + r 74 -9.9 -3.41602 | opp_overlap 3286814 3286817 3286824 CCGACCGCCAGACAT CAGTAAAAGCAGA AACGC TCTGATTTTACTG TTGTCCTGCAGTGAG UTI89_C3357 3286994 - 3286791 - | hypothetical protein yqgA 3287109 - 3287816 + | hypothetical protein TERM 4446 3287964 - 3287948 - f 74 -10.9 -2.62616 | opp_overlap 3287947 3287946 3287943 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4447 3288011 - 3288027 + F 100 -10.8 -5.10154 | opp_overlap 3288011 CACTATTCTAAAGAA CCCGCC CACAA GGCGGG TTTTTGCTTTTGGAT TERM 4448 3288027 - 3288011 - f 91 -11.5 -3.94634 | opp_overlap 3288011 CACTATTCTAAAGAA CCCGCCC ACA AGGCGGG TTTTTGCTTTTGGAT UTI89_C3360 3288222 - 3288377 + | hypothetical protein UTI89_C3361 3288688 - 3288545 - | hypothetical protein TERM 4449 3288853 - 3288866 + H 74 -3.9 -4.89233 | opp_overlap 3288853 TTACGAGGAAATAAT CAATT GATA AATTG TTTTTGGTCTTAATA TERM 4450 3289584 - 3289570 - g 70 -4.2 -4.65895 | opp_overlap 3289571, overlap 3289571 TCCTTCACTGAAAAA TTTCGG CAA CCGAAT TATCGCCATTACCAA kpsF 3289151 - 3290170 + | polysialic acid capsule synthesis protein KpsF kpsE 3290242 - 3291390 + | polysialic acid capsule synthesis protein KpsE kpsD 3291411 - 3293090 + | polysialic acid transport protein KpsD precursor kpsU 3293100 - 3293840 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 4451 3293887 - 3293912 + G 77 -8.3 -4.08706 | opp_overlap 3293888, overlap 3293888 TCCGCATCTGGAGAA ATTTCTGGCGC AACC GTGCCAGAAAC TTTCTCTGCTGCGCC TERM 4452 3293888 - 3293911 + G 75 -11.8 -3.04902 | opp_overlap 3293888, overlap 3293887 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGC TERM 4453 3293911 - 3293888 - g 78 -9.6 -3.87815 | opp_overlap 3293888 3293887 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGC TERM 4454 3293989 - 3293947 - g 72 -10.4 -3.28745 | overlap 3293942 TCCGCAAGAAGTTAA TGCTATCGCCGTGTGGGGAC ATC GTCCCAGCGCGGCGAAACCA GTCGCCATCGCCAAA TERM 4455 3294678 - 3294698 + G 77 -6.1 -4.60041 | TATCTGCCCGACGCG GTTCTGCCA CGC TGGAGGAAC TTTTTGCCGCTGCAT kpsC 3293837 - 3295864 + | capsule polysaccharide export protein KpsC TERM 4456 3295956 - 3295969 + G 79 -3.7 -5.09225 | TATCTGCTATTGCAG GGGCC GATG GGACC TTTTTTCAATGACGT kpsS 3295899 - 3297104 + | polysialic acid capsule synthesis protein KpsS neuS 3298483 - 3297254 - | poly-alpha-2,8 sialosyl sialyltransferase TERM 4457 3298421 - 3298409 - G 91 -5.5 -5.32944 | TTTAGAATTAAAAAA CCATG AGT CACGG AAAAACCCAATTGGA neuE 3299621 - 3298473 - | NeuE protein neuC 3300789 - 3299614 - | polysialic acid biosynthesis protein P7 neuA 3302042 - 3300786 - | acylneuraminate cytidylyltransferase neuB 3303082 - 3302042 - | sialic acid synthase NeuB neuD 3303702 - 3303079 - | sialic acid synthase NeuD TERM 4458 3303422 - 3303390 - G 90 -7.1 -5.1356 | opp_overlap 3303416 TTTTACCAATAAAAA TTCCATCACCCAGTA TAA TATTTGGTGATAGAA TAGCAGTTTTATCTA kpsT 3304411 - 3303752 - | polysialic acid transport ATP-binding protein kpsT kpsM 3305184 - 3304408 - | polysialic acid transport protein KpsM TERM 4459 3305334 - 3305323 - R 79 -3 -5.42862 | opp_overlap 3305323, overlap 3305325 ATAGCCGCAAAAAAA TTTC AGCA GAAA TTATTTCCGCAGGGA TERM 4460 3305455 - 3305472 + r 100 -5.7 -5.66229 | opp_overlap 3305458, overlap 3305463 TTTAGAATGCAGAGT TAATTTC TCAG GAAATTA TTTTTTGTTATTACT gspM 3306778 - 3306242 - | putative general secretion pathway protein YghD gspL 3307640 - 3306780 - | GspL-like protein TERM 4461 3307031 - 3307049 + g 74 -3 -5.00884 | overlap 3307033 CGAGCAGCCGGGTAT CATCGGCC TGC GGGCGATA TTTTTTCAGCGCCAT gspK 3308932 - 3307955 - | hypothetical protein TERM 4462 3308697 - 3308679 - G 100 -10.2 -5.03314 | opp_overlap 3308679 3308678, overlap 3308691 GGCAGTGGGAAAAAA CGCGGGCC AGA AGCCCACG GTTGTGCCAGATGCA gspJ 3309498 - 3308929 - | type II secretion protein GspJ TERM 4463 3309491 - 3309480 - G 77 -5.8 -4.67353 | CCAGTGAGGCAAAAA TGGC TATC GCCA CCAGCATTTCCAGTA gspI 3309902 - 3309531 - | type II secretion protein GspI TERM 4464 3309868 - 3309857 - G 77 -5.8 -4.62783 | CAGCCAGCGCAAAAA TCGC CAGC GCGA GCATCACTTCCAGCA gspH 3310462 - 3309899 - | type II secretion protein GspH TERM 4465 3310229 - 3310213 - G 93 -12.3 -3.85817 | overlap 3310199 ACCGGGTCGCAGAAA CGGGCAA CCA TTGCCCG TGACGACGCTGCATA gspG 3310921 - 3310466 - | type II secretion protein GspG TERM 4466 3310769 - 3310792 + g 72 -5.3 -4.46072 | gap 1 CAGCGCCACGATATC GCTGAT-GGC TTTTT GCCGATCGGC TTTCTCTTTGTTGCC gspF 3312161 - 3310938 - | type II secretion protein GspF TERM 4467 3311182 - 3311200 + g 75 -11.6 -2.84098 | opp_overlap 3311171 3311169 3311172, overlap 3311179 AACAGGCGCAGATCC GCCAGCGC GGC GCGCAGGC TGCTTCCTTCGCGGA TERM 4468 3311362 - 3311341 - G 70 -4.3 -4.57341 | overlap 3311342 AACGTGCGGGAAAAA CGCGCCG TATTCAGT CCGCGCG CAACACGCCCCGTCA gspE 3313654 - 3312161 - | type II secretion protein GspE TERM 4469 3312970 - 3312983 + g 75 -4.5 -4.83169 | opp_overlap 3312955 3312954, overlap 3312971 CCAGACGCTCCAGCG TCAGG CGAG CCTGG TTTTTGTCCAGCAGT TERM 4470 3313393 - 3313373 - G 83 -5.3 -5.05782 | opp_overlap 3313375, overlap 3313375 AGCGAGGGTAAAAAA GTCCTCGGC GGA ACCGAGATC TTCCATCAGCTGGCG gspD 3315714 - 3313654 - | type II secretion protein GspD TERM 4471 3315501 - 3315512 + g 72 -4.4 -4.68103 | CCTGAACGCCCGGCC CCAT AATG ATGG TTTTATTAAGGTTAG TERM 4472 3315641 - 3315619 - G 81 -10.6 -3.59946 | CGGTGAACTACACAA TGCCGCTG CCAGCAT CAGCGGCA GTAAACGCTTTTTTG gspC 3316574 - 3315744 - | putative type II secretion protein GspC TERM 4473 3316095 - 3316106 + g 84 -3.6 -5.1861 | overlap 3316094 3316093 AGCTTGCTTTGCTTC GTCG CTGG CGGC TTTTTTGCTGGTCAC TERM 4474 3316454 - 3316466 + g 70 -6.2 -4.16016 | opp_overlap 3316443, overlap 3316461 CGAACGGTTTTGCAT CCGC ACGGA GCGG TTTATTCACCGATGA TERM 4475 3316687 - 3316673 - R 78 -8.6 -4.13872 | ATTGAATGAGATAAA TTCGTG CGT CACGAA AAACAACCCGCGCCA yghG 3317131 - 3316721 - | lipoprotein TERM 4476 3317024 - 3317039 + g 93 -10.4 -4.50058 | TTGCGCCTGTTTTTT CGCCAG TAAA CTGGCG TTTTCATTATGGCTG pppA 3318006 - 3317197 - | putative prepilin peptidase A TERM 4477 3318089 - 3318122 + r 100 -14.7 -3.54475 | gap 1, opp_overlap 3318087 3318086, overlap 3318076 CAGGCCCGATAAGCT GGCGCATCGGG-CA TATGTGT TGACCCGATGCGCC TTATATCATGCCGGA TERM 4478 3318162 - 3318131 - R 70 -10 -2.62263 | opp_overlap 3318141 ATGCGCCTTATATCA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACAGGCTTACTCGG yghJ 3322732 - 3318170 - | putative lipoprotein AcfD-like precursor UTI89_C3390 3322883 - 3323188 + | hypothetical protein TERM 4479 3323179 - 3323207 + T 77 -8.9 -3.73068 | opp_overlap 3323176 3323170 3323180, overlap 3323180 GAATAATGTAAACGA AGCCGGATGAT ATTAACG ATCATCCGGCA TTATTGACTTACGAA TERM 4480 3323206 - 3323180 - T 95 -12.4 -3.58779 | opp_overlap 3323179 3323180, overlap 3323176 3323170 AATAATGTAAACGAA GCCGGATGAT ATTAACG ATCATCCGGC ATTATTGACTTACGA TERM 4481 3323180 - 3323206 + T 82 -12.4 -2.8352 | opp_overlap 3323180 3323176 3323170, overlap 3323179 AATAATGTAAACGAA GCCGGATGAT ATTAACG ATCATCCGGC ATTATTGACTTACGA glcA 3324898 - 3323216 - | glycolate transporter TERM 4482 3323558 - 3323546 - G 71 -3.3 -4.86033 | overlap 3323557 AAACGGTGAGAAAAA CGGGA ACA TCACG CCTGTACCTGCCAGT TERM 4483 3323762 - 3323749 - G 81 -4.5 -5.06414 | overlap 3323735 3323752 TCGCCGCAATAAAAA TAGCG GTGC CGCCA GCCGAGAGAGGGTCG TERM 4484 3324068 - 3324080 + g 72 -5.5 -4.56597 | TTGTCCCATGCTGAT TGCCG TTT CGGTA TTTTTCGGCCGCCAG TERM 4485 3324402 - 3324392 - G 72 -8.2 -3.794 | GCCCAACGCACCAAA CGCC ACC GGCG CAGTGTTGGCAATCA TERM 4486 3324490 - 3324468 - G 73 -12 -2.82635 | AGGCCCACCAGTAGA GCACCGGTAA TCG CCACCGGTGC GCCAAAGCCAGCCGC TERM 4487 3325214 - 3325239 + r 100 -10.4 -5.42862 | opp_overlap 3325214 GCAGTTACTATCATA GCCCCGACAA TAAATC TTGCCGGGGC TTTTTTTGACGCTAT TERM 4488 3325239 - 3325214 - R 82 -12.6 -2.83164 | opp_overlap 3325214 GCAGTTACTATCATA GCCCCGACAA TAAATC TTGCCGGGGC TTTTTTTGACGCTAT glcB 3327425 - 3325254 - | malate synthase G glcG 3327869 - 3327447 - | hypothetical protein TERM 4489 3327653 - 3327668 + g 72 -7.5 -3.96327 | TTTCACGACGCCCCA GCGCG GCGGTA CGCGC TTTCTCCTGGGAGAT TERM 4490 3329044 - 3329004 - R 83 -12.4 -3.07575 | opp_overlap 3328996 3329004, overlap 3328994 3329006 3329008 AAAATCCGCAGTGAA CACAGGCGCGCAGGATGC TGTCG GCTTCCAGCGCGCGCGCG TTCTGCCGCATCTCT TERM 4491 3329042 - 3329006 - R 79 -11.4 -3.09175 | opp_overlap 3329004 3328996, overlap 3329004 3328994 3329008 AATCCGCAGTGAACA CAGGCGCGCAGGATGC TGTCG GCTTCCAGCGCGCGCG CGTTCTGCCGCATCT TERM 4492 3329040 - 3329008 - R 73 -10.4 -3.10344 | opp_overlap 3329004 3328996, overlap 3329006 3329004 3328994 TCCGCAGTGAACACA GGCGCGCAGGATGC TGTCG GCTTCCAGCGCGCG CGCGTTCTGCCGCAT TERM 4493 3329212 - 3329175 - R 84 -9.7 -4.19678 | gap 1, overlap 3329176 TGATAGCGGAATAAA GGTGCCGGTAGCGG-GGC AAA GCCACCGTCTCCGGCACT AAACCGGGTCGCATG TERM 4494 3329211 - 3329176 - R 86 -13.2 -3.11325 | gap 1, overlap 3329175 GATAGCGGAATAAAG GTGCCGGTAGCGG-GGC AAA GCCACCGTCTCCGGCAC TAAACCGGGTCGCAT glcD 3331641 - 3330142 - | glycolate oxidase subunit GlcD glcC 3331832 - 3332656 + | DNA-binding transcriptional regulator GlcC UTI89_C3396 3333805 - 3332663 - | hypothetical protein TERM 4495 3333218 - 3333229 + g 90 -4.4 -5.40072 | CACTTTTTTGCGCAC CTGA TCCA TCAG TTTTTTTAGCGCCGG TERM 4496 3334409 - 3334386 - g 91 -7.4 -5.09426 | gap 1, opp_overlap 3334391 CTGAACCTGAAAAAA GGCGATC-GCG TGG CGCTGATTGCC GAAACGAGTAGCGGG TERM 4497 3335635 - 3335647 + G 70 -4.1 -4.63218 | opp_overlap 3335618 CGGAAATTCATTCTG GCGAT GCG ATTGC TTTTGTTACCGCCCA UTI89_C3397 3334167 - 3335900 + | acyl-CoA synthetase UTI89_C3398 3335897 - 3336811 + | hypothetical protein UTI89_C3399 3336843 - 3337091 + | acyl carrier protein, putative UTI89_C3400 3337091 - 3338263 + | hypothetical protein TERM 4498 3338301 - 3338264 - T 100 -13.5 -3.30741 | gap 1, opp_overlap 3338266 3338270, overlap 3338265 ACTCAGAAGCAGTAA TGTGAACCCGCCGTGGTG TTG CGCCACGGCGGGTTTA-A TGTTGTCTGTCATAC TERM 4499 3338301 - 3338265 - T 89 -15.1 -2.57963 | opp_overlap 3338266 3338270, overlap 3338264 CTCAGAAGCAGTAAT GTGAACCCGCCGTGGTG TTG CGCCACGGCGGGTTTAA TGTTGTCTGTCATAC TERM 4500 3338266 - 3338300 + T 100 -23 -2.62712 | opp_overlap 3338264 3338265, overlap 3338270 TCAGAAGCAGTAATG TGAACCCGCCGTGGTG TTG CGCCACGGCGGGTTTA ATGTTGTCTGTCATA TERM 4501 3338270 - 3338296 + T 100 -21.6 -3.99878 | opp_overlap 3338264 3338265, overlap 3338266 AAGCAGTAATGTGAA CCCGCCGTGGTG TTG CGCCACGGCGGG TTTAATGTTGTCTGT UTI89_C3401 3339458 - 3338298 - | hypothetical protein UTI89_C3402 3340444 - 3339374 - | hypothetical protein TERM 4502 3339814 - 3339841 + gr 72 -7.8 -3.90318 | gap 1, opp_overlap 3339813, overlap 3339819 GATCGAGAAGATAGG CGGTACCGTTATG CAA CATAACGGT-CGG TTTCTCGGGTGATGG TERM 4503 3339819 - 3339837 + gr 79 -11.8 -2.7083 | opp_overlap 3339813, overlap 3339814 AGAAGATAGGCGGTA CCGTTATG CAA CATAACGG TCGGTTTCTCGGGTG UTI89_C3403 3341035 - 3340475 - | protein YtfJ precursor UTI89_C3404 3341871 - 3341035 - | hypothetical protein yghQ 3343220 - 3341871 - | hypothetical protein yghR 3344036 - 3343266 - | hypothetical protein TERM 4504 3343718 - 3343742 + g 72 -7 -4.24384 | opp_overlap 3343718 3343721, overlap 3343713 AGAAGCAGTACATAA TCACCGCCGC CCATA GCGCCGGAGA TTTGGTTTTCATGCT yghS 3344769 - 3344056 - | ATP-binding protein YghS yghT 3344944 - 3345636 + | ATP-binding protein YghT TERM 4505 3345678 - 3345644 - T 100 -13.7 -4.68994 | opp_overlap 3345650 ATCACTAGTGAAAAA TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA GGAAGGTTAAATCAA TERM 4506 3345650 - 3345672 + T 80 -9.1 -4.08692 | opp_overlap 3345644 AGTGAAAAATGGAAA TGCCCGATC GCCAG GACCGGGCA TTTTCAGGAAGGTTA pitB 3347184 - 3345685 - | inorganic phosphate transporter TERM 4507 3347461 - 3347425 - R 100 -16.8 -3.16668 | opp_overlap 3347415 3347426, overlap 3347413 3347415 GAATATTTTGATTAA TCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGGT TGCTACAACATGTAT TERM 4508 3347426 - 3347460 + r 100 -20.3 -3.15249 | opp_overlap 3347425 3347413 3347415, overlap 3347415 AATATTTTGATTAAT CCCCGTACTGATTAT TCTTC ATAATCAGTACGGGG TTGCTACAACATGTA gsp 3349338 - 3347476 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 4509 3348093 - 3348107 + g 74 -10 -3.54919 | GCAGTTCCTCTAACC CGCGTA AAA TACGCG TTTCAAAGCCTGCTT yghU 3349492 - 3350406 + | putative glutathione S-transferase YghU TERM 4510 3350478 - 3350447 - T 79 -12.2 -2.58892 | overlap 3350433 3350457 3350458 ATCCAGACCAATGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA ATCGAGCACAATGCC TERM 4511 3350523 - 3350490 - T 75 -9.5 -3.44319 | opp_overlap 3350497 3350498 3350500, overlap 3350458 3350491 GGCAATCGAGCACAA TGCCTGATGCGACGC TGCC GCGTCTTATCAGGCC TACAAAAGCTAATCA TERM 4512 3350522 - 3350491 - T 84 -13 -2.6627 | opp_overlap 3350497 3350498 3350500, overlap 3350458 3350490 GCAATCGAGCACAAT GCCTGATGCGACGC TGCC GCGTCTTATCAGGC CTACAAAAGCTAATC hybG 3350787 - 3350539 - | hydrogenase 2 accessory protein HypG hybF 3351141 - 3350800 - | hydrogenase nickel incorporation protein HybF hybE 3351622 - 3351134 - | hydrogenase 2-specific chaperone TERM 4513 3351184 - 3351166 - G 83 -12.4 -3.34398 | opp_overlap 3351165, overlap 3351137 3351164 TCCTGCGGCCAAATA GCAGGGCA CGA CGCCCTGC GTGTGGTACATCCGG hybD 3352109 - 3351615 - | hydrogenase 2 maturation endopeptidase TERM 4514 3351756 - 3351771 + g 70 -4.6 -4.57569 | TGATTCCGGGATCAC GCCGAC CAGG GTCAGC TTTTTCGGAAACTCG hybC 3353812 - 3352109 - | hydrogenase 2 large subunit TERM 4515 3353658 - 3353672 + g 72 -4.9 -4.61633 | opp_overlap 3353650, overlap 3353661 3353665 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 4516 3353831 - 3353842 + r 77 -4.4 -5.07652 | overlap 3353820 3353825 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3354987 - 3353809 - | putative hydrogenase 2 b cytochrome subunit hybA 3355963 - 3354977 - | hydrogenase 2 protein HybA TERM 4517 3355620 - 3355633 + g 72 -6.7 -4.29106 | CAGTTCGGATCGACG CAGTG CATA CACTG TTTCTTAATGTACGC UTI89_C3419 3357084 - 3355966 - | hydrogenase 2 small subunit TERM 4518 3356085 - 3356121 + g 70 -6.6 -4.03234 | gap 1, opp_overlap 3356079 AACCAATAGCGCCTG CCGAGACGTTGCCGC CTTCTTTA GCGTTAACGTC-CGG TTTCTGTGAACGCGG yghW 3357560 - 3357273 - | hypothetical protein TERM 4519 3357573 - 3357598 + r 72 -8.5 -3.63744 | overlap 3357572 CATCGTTCACCTCAT TCGTTATATAT TGTC ATATATAGCGA TATTTTAGGCAAAGA UTI89_C3421 3358605 - 3357679 - | putative enzyme yghZ 3358723 - 3359763 + | aldo-keto reductase TERM 4520 3359795 - 3359775 - T 100 -16.1 -3.62775 | overlap 3359764 ATGACCTGTTAATAA CGGGCGCGA GAA CCGCGCCCG AATCAGATCAGTGAT yqhA 3360327 - 3359803 - | hypothetical protein yghA 3360485 - 3361372 + | oxidoreductase TERM 4521 3361375 - 3361407 + T 100 -8.4 -5.34381 | opp_overlap 3361378, overlap 3361357 3361376 3361378 GCATTTAGGTTAAAA AAATGCCCGGTTGT GAAAA GCAACCGGGCATCA TTTTTATTTCGCTTT TERM 4522 3361376 - 3361406 + T 93 -11.9 -3.78189 | opp_overlap 3361378, overlap 3361357 3361375 3361378 CATTTAGGTTAAAAA AATGCCCGGTTGT GAAAA GCAACCGGGCATC ATTTTTATTTCGCTT TERM 4523 3361404 - 3361378 - T 100 -13.8 -5.44119 | opp_overlap 3361357 3361376 3361375 3361378 TTTAGGTTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTTTTATTTCGC TERM 4524 3361378 - 3361404 + T 100 -14.5 -3.45131 | opp_overlap 3361378, overlap 3361357 3361376 3361375 TTTAGGTTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTTTTATTTCGC exbD 3361836 - 3361411 - | biopolymer transport protein ExbD exbB 3362577 - 3361843 - | biopolymer transport protein ExbB UTI89_C3427 3362725 - 3362570 - | hypothetical protein TERM 4525 3362826 - 3362816 - gH 79 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 4526 3362900 - 3362883 - gH 74 -2 -5.1675 | gap 1 GGACGCAGCAAAAAA TACACGC TCGGT GCG-GTA AATAGCGTGATTCAG TERM 4527 3362976 - 3362960 - gH 70 -5.8 -4.20888 | opp_overlap 3362973, overlap 3362972 GGAAGCCAAAAAACA CGCGAC ACGTA ATCGCG CCAATGGCGAGTTGT metC 3362694 - 3364016 + | cystathionine beta-lyase TERM 4528 3364518 - 3364544 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT yghB 3364156 - 3364815 + | hypothetical protein TERM 4529 3364824 - 3364853 + TF 72 -7.8 -3.91911 | overlap 3364826 CGCCTGACGATTTTC CCCGTTCCCGGT TGCTGT ACCGGGAACGTA TTTAATTCCCCTGCA TERM 4530 3364826 - 3364851 + TF 100 -14.8 -3.5486 | overlap 3364824 CCTGACGATTTTCCC CGTTCCCGGT TGCTGT ACCGGGAACG TATTTAATTCCCCTG yqhC 3365982 - 3364855 - | transcriptional regulator YqhC TERM 4531 3364990 - 3365014 + gF 80 -10.7 -3.29144 | GCTGGCCTTCATGCC GTCGTGGATGA TCA TCATCCGCGCC TTATGCAGACGGTAA TERM 4532 3366851 - 3366836 - gH 75 -4.6 -4.8622 | CTGTGGAATGAAAAA CGCGAT ACCA AGCGCG CTAAGCTGCTGCAAT yqhD 3365948 - 3367111 + | oxidoreductase YqhD TERM 4533 3367198 - 3367169 - fH 80 -10.7 -3.36968 | opp_overlap 3367172, overlap 3367171 3367172 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 4534 3367196 - 3367171 - fH 91 -13.3 -3.25192 | opp_overlap 3367172, overlap 3367169 3367172 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 4535 3367172 - 3367195 + FH 100 -16.8 -3.25823 | opp_overlap 3367171 3367169 3367172 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 4536 3367195 - 3367172 - fH 100 -16.8 -2.54794 | opp_overlap 3367172, overlap 3367171 3367169 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3367216 - 3368043 + | 2,5-diketo-D-gluconate reductase A TERM 4537 3368055 - 3368085 + F 72 -7.4 -4.10429 | overlap 3368056 CTAACGTGCAAATTC TCCCGGTGGCGGTA ATG TTCCGCTACCGGAC TTTTCAGAAATCATT TERM 4538 3368056 - 3368084 + F 76 -10.9 -3.05775 | overlap 3368055 TAACGTGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT yqhG 3368243 - 3369169 + | hypothetical protein yqhH 3369220 - 3369477 + | putative outer membrane lipoprotein TERM 4539 3369484 - 3369514 + T 93 -10.4 -5.0538 | opp_overlap 3369486, overlap 3369486 GCAGAATGATAAAAA AATCCCCGGCAGCA TTC TGTTACCGGGGATA TTTTTTAACGTCCAA TERM 4540 3369486 - 3369512 + T 100 -13 -4.15748 | opp_overlap 3369486, overlap 3369484 AGAATGATAAAAAAA TCCCCGGCAGCA TTC TGTTACCGGGGA TATTTTTTAACGTCC TERM 4541 3369512 - 3369486 - T 100 -13 -5.73339 | opp_overlap 3369484 3369486 AGAATGATAAAAAAA TCCCCGGCAGCA TTC TGTTACCGGGGA TATTTTTTAACGTCC UTI89_C3435 3371738 - 3369519 - | hypothetical protein TERM 4542 3369578 - 3369590 + g 90 -4.8 -5.44119 | TCTGCAGGCGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC UTI89_C3436 3371990 - 3372739 + | putative regulator TERM 4543 3373581 - 3373597 + G 72 -6.5 -4.38171 | opp_overlap 3373581, overlap 3373595 TTGCAACAACGTAAA GCGGC AGGACTC GCCGC TTTTAGTGTGCTCTC TERM 4544 3374258 - 3374241 - g 75 -4.9 -4.77036 | TTGCATCAGCAAAAA CAAAACA ATGC TGTTCTG TCACTGCTCGTTGCT TERM 4545 3374472 - 3374461 - g 95 -5.8 -5.41941 | TAAATGAAATAAAAA TCGC CTTT GCGA ATATAAAAAACAAAG UTI89_C3437 3373026 - 3374534 + | oxidoreductase YdfI UTI89_C3438 3374531 - 3375547 + | zinc-type alcohol dehydrogenase-like protein YjjN TERM 4546 3376012 - 3376022 + G 85 -8.2 -4.58395 | overlap 3376003 TGGCTCCCCATGGCG GCGC CGA GCGC TTTTTGGGAACTAAC UTI89_C3439 3375558 - 3376568 + | ureidoglycolate dehydrogenase UTI89_C3440 3376641 - 3377624 + | putative c4-dicarboxylate transport system binding protein TERM 4547 3377633 - 3377649 + F 84 -9.4 -4.25283 | TATGTAACCCTAATG GGCAGG TAATT CCTGCC TTTTCATGGAAGACT UTI89_C3441 3377666 - 3378148 + | hypothetical protein ygiK 3378117 - 3379463 + | c4-dicarboxylate permease TERM 4548 3379527 - 3379492 - T 74 -10.5 -3.20382 | opp_overlap 3379494, overlap 3379493 CTGCATACTGAGTAA TTTTCAATGCCCCAC CACTCT GTGGGGCATTGAATT GGTCCATTACGGTAC TERM 4549 3379526 - 3379493 - T 86 -14 -2.52015 | opp_overlap 3379494, overlap 3379492 TGCATACTGAGTAAT TTTCAATGCCCCAC CACTCT GTGGGGCATTGAAT TGGTCCATTACGGTA TERM 4550 3379494 - 3379525 + T 100 -17.5 -3.22091 | opp_overlap 3379493 3379492 GCATACTGAGTAATT TTCAATGCCCCAC CACTCT GTGGGGCATTGAA TTGGTCCATTACGGT sufI 3380946 - 3379534 - | repressor protein for FtsI plsC 3381758 - 3381021 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase UTI89_C3445 3381962 - 3381807 - | hypothetical protein parC 3384251 - 3381993 - | DNA topoisomerase IV subunit A TERM 4551 3383422 - 3383443 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACGC TERM 4552 3384380 - 3384354 - R 89 -15.1 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGGCGGCGA TAAAGGCATCAATGT UTI89_C3447 3386059 - 3384389 - | putative binding protein TERM 4553 3385676 - 3385659 - G 72 -5.5 -4.46926 | overlap 3385660 CAGCCGAGGACAAAA TCCTCTG CCGT CAGAGGC TGACCGTCTGACCAC ygiV 3386587 - 3386105 - | hypothetical protein ygiW 3387089 - 3386640 - | hypothetical protein ygiX 3387184 - 3387843 + | DNA-binding transcriptional regulator QseB TERM 4554 3388092 - 3388071 - g 70 -3.7 -4.72863 | CCAAATAAATTAAAA CACGGTCAT GTTG ATGACGATG CGCTGACTTTTGCCA qseC 3387840 - 3389189 + | sensor protein QseC TERM 4555 3389197 - 3389230 + T 100 -16.9 -3.78775 | opp_overlap 3389207 GCTGGTAACTTCTCT GTCTATGAGAGCCGT TAAA ACGACTCTCATAGAC TTTACTAATAGCAAA UTI89_C3452 3389567 - 3389235 - | hypothetical protein UTI89_C3453 3390311 - 3389574 - | hypothetical protein UTI89_C3454 3390766 - 3390287 - | hypothetical protein TERM 4556 3391133 - 3391078 - g 81 -12.6 -3.18199 | gap 1, opp_overlap 3391077 3391086 3391110, overlap 3391081 CAATGGTCAACTGAA CGACACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATGTCC GCATTGTTCGCGCCG TERM 4557 3391130 - 3391081 - g 81 -12.9 -2.78712 | gap 1, opp_overlap 3391077 3391086 3391110, overlap 3391078 TGGTCAACTGAACGA CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATG TCCGCATTGTTCGCG mdaB 3391016 - 3391597 + | modulator of drug activity B UTI89_C3456 3391945 - 3391622 - | hypothetical protein ygiN 3391628 - 3391942 + | protein YgiN TERM 4558 3391978 - 3391955 - TR 85 -8.1 -4.61231 | TGACATTTCTAAAAA GAGGCCGGT GCTGCT ACCGGTCTC AGCCCAGATTAGCCA UTI89_C3458 3392874 - 3391987 - | hypothetical protein UTI89_C3459 3393881 - 3392871 - | iron ABC transporter substrate-binding protein UTI89_C3460 3394878 - 3393829 - | iron ABC transporter permease UTI89_C3461 3395858 - 3394875 - | iron ABC transporter permease TERM 4559 3395318 - 3395345 + g 72 -8.4 -3.72374 | opp_overlap 3395317 3395315 3395314, overlap 3395315 GCCCCGCTAAATCAC CTGCTAGCCATG TCCG CATCGCCAGCAG TGTTTGTTCGTCAAG UTI89_C3462 3396664 - 3395855 - | ferric enterobactin transport ATP-binding protein fepC TERM 4560 3397000 - 3397017 + H 89 -8.4 -4.62069 | AAGAAACAATTTTCA CTCGCG ACAATC CGCGAG TTTTTGGGATAACAG TERM 4561 3399132 - 3399119 - g 70 -6.7 -4.07133 | CATCGCCACAAATAA TCTGG GCAA CCAGA TTGGCGATCCGCGTG UTI89_C3463 3397038 - 3399179 + | putative iron compound receptor TERM 4562 3399184 - 3399217 + T 100 -12.5 -4.95547 | opp_overlap 3399188, overlap 3399186 3399188 TGGAATTTTGATCAA AAAAGCCCGGTATAC ACTT GTATACCGGGCTATG TTTTATTCTTCTGGC TERM 4563 3399186 - 3399215 + T 100 -15.1 -4.08992 | opp_overlap 3399188, overlap 3399184 3399188 GAATTTTGATCAAAA AAGCCCGGTATAC ACTT GTATACCGGGCTA TGTTTTATTCTTCTG TERM 4564 3399188 - 3399213 + T 100 -17.7 -3.60952 | opp_overlap 3399188, overlap 3399186 3399184 ATTTTGATCAAAAAA GCCCGGTATAC ACTT GTATACCGGGC TATGTTTTATTCTTC TERM 4565 3399213 - 3399188 - T 100 -17.7 -5.14965 | opp_overlap 3399188 3399186 3399184 ATTTTGATCAAAAAA GCCCGGTATAC ACTT GTATACCGGGC TATGTTTTATTCTTC parE 3401135 - 3399243 - | DNA topoisomerase IV subunit B TERM 4566 3400153 - 3400165 + g 75 -5.5 -4.72272 | opp_overlap 3400153 GTCTGCCCGGCAAAC TGCGG ATC CTGCA TTTTTACTGACAGCA yqiA 3401745 - 3401164 - | esterase YqiA icc 3402572 - 3401745 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 3403019 - 3402597 - | hypothetical protein TERM 4567 3402686 - 3402696 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA TERM 4568 3403044 - 3403096 + r 72 -6.9 -4.20712 | overlap 3403052 CTCATTTTTTAACGC TTGATGATGCAGCTGCAGCCATTGC AAA GCGATGACCGACGCTGCGTTGTCGA TTTTCCCCTCTTCTA nudF 3403649 - 3403020 - | ADP-ribose pyrophosphatase NudF TERM 4569 3404946 - 3404918 - g 77 -9.7 -3.61398 | TTCCTCCTTCAACAA CATTAATGCTTCT ATC AGTAGCATTAACG CCTACAAACAAGCCG tolC 3403815 - 3405335 + | outer membrane channel protein TERM 4570 3405562 - 3405573 + G 71 -2.2 -4.9218 | overlap 3405561 CACCAGTCGCTCTCG CGGT TGCC ACTG TTTTTATGCTGGCTG ygiA 3405332 - 3405595 + | hypothetical protein TERM 4571 3405827 - 3405812 - gf 70 -4.6 -4.46926 | CATGGCACCAGAAAA CCAGGC GCAG GCCCAG CAATCCAGCGGGAGT TERM 4572 3406013 - 3405983 - gf 89 -8.3 -4.59773 | gap 1, overlap 3405984 3405986 CGCGACCGGTAAAAA CTATGGCGCAGCCC AGCC AGGCCGCACCAT-G ACCGTACCGAAGACG TERM 4573 3406011 - 3405986 - gf 78 -11.1 -3.24422 | overlap 3405983 3405984 GACCGGTAAAAACTA TGGCGCAGCCC AGCC AGGCCGCACCA TGACCGTACCGAAGA TERM 4574 3406120 - 3406102 - gf 70 -5.2 -4.41348 | CTGTTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC ygiB 3405483 - 3406154 + | hypothetical protein TERM 4575 3406222 - 3406266 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 3406236, overlap 3406225 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGAC TERM 4576 3406225 - 3406263 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 3406236, overlap 3406222 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT ygiC 3406160 - 3407320 + | putative synthetase/amidase TERM 4577 3407331 - 3407355 + F 74 -10 -3.27475 | opp_overlap 3407333, overlap 3407329 3407333 AGTAATACAGCTTAA TATTGCCCCG ATAAG CGGGGCAATC TCTTATAATCCACCA TERM 4578 3407333 - 3407353 + F 86 -12.6 -3.20322 | opp_overlap 3407333, overlap 3407331 3407329 TAATACAGCTTAATA TTGCCCCG ATAAG CGGGGCAA TCTCTTATAATCCAC TERM 4579 3407353 - 3407333 - f 83 -12.6 -3.09648 | opp_overlap 3407333 3407331 3407329 TAATACAGCTTAATA TTGCCCCG ATAAG CGGGGCAA TCTCTTATAATCCAC TERM 4580 3408380 - 3408353 - g 82 -3.4 -5.24799 | gap 1, opp_overlap 3408369 3408371 TGAGAAAGATAAAAA TGCCGGTATCC TTGATGC GGGT-CCGGCA ACCGGCGCACTCCCT asst 3407805 - 3409601 + | arylsulfate sulfotransferase TERM 4581 3409860 - 3409838 - g 70 -3.5 -4.62069 | CCGGTATCGGAAAAA GTGAAAG ATATCGTTG CTTTCAC GCCATTCCATCTGGA UTI89_C3474 3409619 - 3410287 + | putative disulfide isomerase UTI89_C3475 3410302 - 3410973 + | putative disulfide oxidoreductase TERM 4582 3410981 - 3411013 + T 100 -12 -4.66987 | opp_overlap 3410982 3410984, overlap 3410984 GAGGCTAACTCAGCA ACACCCGAAGCCAG TCGTT CTGGCTTCGGGTTC TTTTATTAACCTATC TERM 4583 3411012 - 3410982 - T 100 -15.5 -3.22091 | opp_overlap 3410981 3410984, overlap 3410984 AGGCTAACTCAGCAA CACCCGAAGCCAG TCGTT CTGGCTTCGGGTT CTTTTATTAACCTAT TERM 4584 3411010 - 3410984 - T 100 -18.1 -3.17319 | opp_overlap 3410984 3410981, overlap 3410982 GCTAACTCAGCAACA CCCGAAGCCAG TCGTT CTGGCTTCGGG TTCTTTTATTAACCT TERM 4585 3410984 - 3411010 + T 100 -18.1 -4.43909 | opp_overlap 3410982 3410984, overlap 3410981 GCTAACTCAGCAACA CCCGAAGCCAG TCGTT CTGGCTTCGGG TTCTTTTATTAACCT ygiD 3411834 - 3411019 - | hypothetical protein zupT 3411908 - 3412723 + | zinc transporter ZupT TERM 4586 3412767 - 3412736 - T 82 -12.4 -2.90598 | opp_overlap 3412730 3412736 3412738 3412740, overlap 3412733 3412738 TAAAGACGATAATGA CAGATGTTGCCCAT TGCT AAAGGCAACATCTG TATCGTTATTAAAGA TERM 4587 3412736 - 3412767 + T 73 -10.3 -3.01745 | opp_overlap 3412736 3412733 3412738, overlap 3412730 3412738 3412740 TAAAGACGATAATGA CAGATGTTGCC CATTGCTAAA GGCAACATCTG TATCGTTATTAAAGA UTI89_C3478 3412970 - 3412785 - | hypothetical protein TERM 4588 3413284 - 3413296 + H 72 -3.4 -5.00884 | GGCGTAAACCTTTGT CAAC AAACG GTTG TTTTTTCGCCGCAAT ygiL 3413527 - 3414090 + | putative fimbrial protein TERM 4589 3414146 - 3414127 - f 88 -12.2 -3.55563 | opp_overlap 3414125 ACGCCAGGCGGTAAA GCCGATGA AATT TCATCGGC AACTTTGGGCCTTTT TERM 4590 3415297 - 3415284 - g 74 -8.1 -4.11394 | ACGTCACTGGGAAAA CCGAC ATCC GTCGG GCATAACGATATCAA TERM 4591 3415818 - 3415796 - g 73 -3.5 -4.86621 | ATCTGTAAGCAAAAA CTTTGATAT TGGCG ATTTCAAAG GTATATCTGCATCGC yqiG 3414177 - 3416699 + | putative outer membrane usher protein YqiG precursor TERM 4592 3417126 - 3417103 - g 88 -12.4 -3.66095 | overlap 3417117 AAATCGCCATGCAAA GCCGCCTGAA GCTA TTCTGGCGGC CAAAAGCGATTGAGT yqiH 3416706 - 3417455 + | putative periplasmic chaperone YqiH precursor TERM 4593 3417473 - 3417490 + G 77 -3.3 -5.12707 | overlap 3417475 ACGCTTTTTCGTTTA CTGGCGA TTCT TTGCCTG TTTTTTAACGTTTCA UTI89_C3482 3417452 - 3418501 + | putative Yqi fimbrial adhesin TERM 4594 3418506 - 3418534 + T 79 -11.8 -2.74755 | opp_overlap 3418506 3418511, overlap 3418511 ACTATAACTGAACAG CAAAATGCCGGG AACAC CCCGGCATTTTC ATATTTAGTATTTCA TERM 4595 3418534 - 3418506 - T 81 -12.5 -2.50779 | opp_overlap 3418506 3418511, overlap 3418511 ACTATAACTGAACAG CAAAATGCCGGGA ACA CCCCGGCATTTTC ATATTTAGTATTTCA TERM 4596 3418529 - 3418511 - T 100 -12.4 -4.44284 | opp_overlap 3418511 3418506, overlap 3418506 AACTGAACAGCAAAA TGCCGGGA ACA CCCCGGCA TTTTCATATTTAGTA TERM 4597 3418511 - 3418529 + T 100 -11.7 -4.51363 | opp_overlap 3418506 3418511, overlap 3418506 AACTGAACAGCAAAA TGCCGGG AACAC CCCGGCA TTTTCATATTTAGTA ribB 3419208 - 3418555 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 4598 3418923 - 3418951 + g 90 -10.3 -4.41206 | opp_overlap 3418928 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT TERM 4599 3419488 - 3419474 - H 71 -8.6 -3.4252 | GCGGATTCACTATAA CGCTAA TGA TTAGCG CCAGCAACGCATAGC yqiC 3419522 - 3419881 + | hypothetical protein TERM 4600 3419910 - 3419895 - T 100 -11.8 -4.95806 | opp_overlap 3419895 AAAGCACCACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT TERM 4601 3419895 - 3419910 + T 79 -11.8 -2.67055 | opp_overlap 3419895 AAAGCACCACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT glgS 3420122 - 3419916 - | glycogen synthesis protein GlgS TERM 4602 3420935 - 3420924 - g 74 -3 -4.99435 | overlap 3420918 CTGAAGAAGGAAAAA CTTT CACT AAAG GAGACAAAGTGTTAA yqiJ 3420386 - 3421015 + | hypothetical protein TERM 4603 3421071 - 3421107 + G 74 -6.5 -4.4634 | overlap 3421073 TAATTCTGTGCCCTC CTGGATGTTTACCGCGA TTA TCGCCGTATGCATTCTG TTTATTATTGGAATT TERM 4604 3422273 - 3422257 - g 72 -4.4 -4.59919 | gap 1, opp_overlap 3422257, overlap 3422258 AAAGCAGAAAAAGAA GCC-GCA GAGA TGCAGGC GGCGGCTATCGTTGA yqiK 3421042 - 3422703 + | hypothetical protein TERM 4605 3422722 - 3422744 + T 100 -8.4 -5.4251 | opp_overlap 3422722 CTCTTCTATGAATAA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4606 3422923 - 3422904 - T 91 -11.4 -3.71649 | opp_overlap 3422903 3422904, overlap 3422887 3422897 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG TERM 4607 3422904 - 3422923 + T 70 -10 -2.57132 | gap 1, opp_overlap 3422887 3422897 3422904, overlap 3422903 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC CTTATAGAAGGAAAG UTI89_C3488 3424555 - 3423122 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase glnE 3427443 - 3424603 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4608 3425596 - 3425571 - G 72 -11.1 -3.06261 | opp_overlap 3425563 3425593 CCGCAATGCGTAACA GCTGCGCCTGT TTGA ACTGACGCAGC GCCTCAAGCTGTTGT ygiF 3428767 - 3427466 - | hypothetical protein TERM 4609 3427822 - 3427796 - G 72 -5 -4.65895 | opp_overlap 3427796, overlap 3427797 TTTGGCATCTAAAAA CGGCTGCCAGGC TTT GCTTACCAGCCA TTCGGTCAACGCCAG TERM 4610 3429441 - 3429431 - g 83 -5.4 -5.093 | GTTAAAAGAAGAAAA TCAG AAA CTGA AAAACGAGCTGATTG ygiM 3429009 - 3429629 + | putative signal transduction protein TERM 4611 3429799 - 3429826 + G 95 -11.2 -4.47397 | overlap 3429800 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTGTTTCT TERM 4612 3429800 - 3429825 + G 95 -14.7 -3.26811 | overlap 3429799 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTGTTTC TERM 4613 3429898 - 3429910 + G 82 -9.1 -4.22652 | opp_overlap 3429885 3429892 AACGGAAATCCGGTT CCGGT TAC ACCGG TTTTACCTGCTATGC TERM 4614 3430086 - 3430111 + G 78 -8.3 -4.2679 | gap 1, opp_overlap 3430085, overlap 3430086 3430095 3430097 3430101 GCTTTTGGCGAAGAT C-CGTTACGCGT GTT GCGCGTAGCGCG TTTTGCTGCGCGTTA TERM 4615 3430284 - 3430305 + G 75 -5.1 -4.63218 | gap 1, overlap 3430294 TTCTTCCAGGTACTG CGCG-ATTGC GGC GCACTGCGCG TTTTATTCCCGGAAA cca 3429693 - 3430931 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4616 3431011 - 3430962 - T 81 -11.8 -3.06796 | gap 3, opp_overlap 3430955 3430980 3430997 3430998 3431010, overlap 3431007 3431009 3431010 CCGGATGCGACGTAA GCGTCTTATCCGG-CTAC-A-TGTC AAC GACAGTTGTAGGCCTGATAAGACGC GCGAGCGTCGCATCA TERM 4617 3430997 - 3431030 + T 74 -9.5 -3.34344 | opp_overlap 3430962 3431007 3431009 3431010, overlap 3430998 3431010 3431027 TCAACGACAGTTGTA GGCCTGATAAGACGC GCGA GCGTCGCATCAGGCG TTGATTGCCGGATGC TERM 4618 3430998 - 3431029 + T 84 -13 -2.60392 | opp_overlap 3430962 3431007 3431009 3431010, overlap 3430997 3431010 3431027 CAACGACAGTTGTAG GCCTGATAAGACGC GCGA GCGTCGCATCAGGC GTTGATTGCCGGATG bacA 3431943 - 3431119 - | undecaprenyl pyrophosphate phosphatase folB 3432402 - 3432031 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase ygiH 3432504 - 3433121 + | putative glycerol-3-phosphate acyltransferase PlsY ygiP 3434114 - 3433134 - | transcriptional activator TtdR TERM 4619 3434222 - 3434208 - H 73 -2.8 -5.06052 | opp_overlap 3434208 GCAAAAAATATAAAA CCAC ATTTTTA GTGG TAGTTTGTGGCGGTG ttdA 3434273 - 3435184 + | tartrate dehydratase subunit alpha TERM 4620 3435735 - 3435720 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 3435181 - 3435786 + | L(+)-tartrate dehydratase subunit beta TERM 4621 3435794 - 3435813 + F 90 -9.3 -4.83615 | opp_overlap 3435787 3435788 TCAAATAACCCTCCC GGAGAGG CTCGCC CCTCTCC TTTTTCTCAGGCATA TERM 4622 3436003 - 3436032 + G 100 -15.1 -3.92542 | TGCCGGGTGCCGTGG TGGCGATGGTGGG TATA TCCATCATCGCCA TTCTTTCGCCGTGGC ygjE 3435834 - 3437297 + | putative tartrate carrier/transporter ygjD 3438353 - 3437340 - | O-sialoglycoprotein endopeptidase TERM 4623 3437736 - 3437724 - G 72 -5.5 -4.50976 | overlap 3437731 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 4624 3438272 - 3438287 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA UTI89_C3501 3438649 - 3438362 - | hypothetical protein TERM 4625 3438558 - 3438541 - GH 76 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3438591 - 3438806 + | 30S ribosomal protein S21 TERM 4626 3438850 - 3438883 + FH 82 -7.6 -4.62475 | overlap 3438854 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 4627 3438854 - 3438880 + FH 90 -10.9 -4.40882 | gap 1, overlap 3438850 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 4628 3439367 - 3439352 - g 70 -3.9 -4.60487 | CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCCCGCT TERM 4629 3440249 - 3440216 - g 70 -5.9 -4.20696 | opp_overlap 3440216 3440227, overlap 3440208 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 3438917 - 3440662 + | DNA primase UTI89_C3504 3440676 - 3440798 + | hypothetical protein TERM 4630 3441630 - 3441610 - g 73 -9.1 -3.60948 | GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTGCCG rpoD 3440857 - 3442698 + | RNA polymerase sigma factor RpoD TERM 4631 3442772 - 3442754 - T 93 -11.7 -3.85698 | opp_overlap 3442754 GTCCCTCCGCACAAA CGCCACC TTTTC GGTGGCG TTTTTTATCGCCCAC TERM 4632 3442754 - 3442772 + T 100 -11.7 -5.24129 | opp_overlap 3442754 GTCCCTCCGCACAAA CGCCACC TTTTC GGTGGCG TTTTTTATCGCCCAC ygjF 3443283 - 3442777 - | G/U mismatch-specific DNA glycosylase TERM 4633 3443495 - 3443516 + r 100 -14.5 -5.71295 | opp_overlap 3443495 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 4634 3443516 - 3443495 - R 100 -14.5 -3.91597 | opp_overlap 3443495 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT yqjH 3444301 - 3443537 - | hypothetical protein TERM 4635 3444701 - 3444744 + G 82 -8 -4.49556 | gap 1, overlap 3444702 CATGAACACGGTCAA TGCTG-CGGTGGTCGCCACGG TCG CGGCGGCGGTCGTCGGCAGCG TTTCTTTGGTCACGG TERM 4636 3445165 - 3445150 - g 100 -3.3 -5.72622 | opp_overlap 3445157 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT yqjI 3444578 - 3445201 + | hypothetical protein TERM 4637 3445246 - 3445202 - T 78 -10.6 -3.1886 | opp_overlap 3445219, overlap 3445203 ACGCAACTGGATTAA TCGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACGC TTGACGCGCCTTATC TERM 4638 3445245 - 3445203 - T 87 -14.1 -2.50994 | opp_overlap 3445219, overlap 3445202 CGCAACTGGATTAAT CGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACG CTTGACGCGCCTTAT TERM 4639 3445290 - 3445321 + T 77 -11.6 -2.64099 | opp_overlap 3445299 3445301, overlap 3445289 CTACACACCCCGTAG GCCTGATAAGATGC GCCA GCATCGCATCAGGC ATTGTGCTCCAACCG TERM 4640 3445370 - 3445399 + T 87 -11.3 -3.57144 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA aer 3446875 - 3445355 - | aerotaxis sensor receptor, flavoprotein TERM 4641 3446604 - 3446621 + g 70 -4.1 -4.59773 | opp_overlap 3446598, overlap 3446589 CGCACCCAATAATGG TCGCC ATTTTTGC GGCGA TTTTTCACGATGCCG TERM 4642 3447085 - 3447066 - H 72 -5.8 -4.57073 | gap 1, overlap 3447069 TATCTTGCCCAAAAA TCA-GGCAA TTA TTGCCCTGA AAGCGTGCATTTGCG ygjG 3447266 - 3448672 + | putrescine--2-oxoglutarate aminotransferase TERM 4643 3448678 - 3448710 + GT 100 -12.8 -4.85599 | opp_overlap 3448680, overlap 3448680 AGAAGCGTAATATCA AATCGGATGGCGAT ACGAC GTCGCCATCCGATC TTTTTATACGATACG TERM 4644 3448708 - 3448680 - gT 100 -14.7 -3.9344 | opp_overlap 3448678 3448680 AAGCGTAATATCAAA TCGGATGGCGA TACGACG TCGCCATCCGA TCTTTTTATACGATA TERM 4645 3448680 - 3448708 + GT 100 -15.4 -4.05067 | opp_overlap 3448680, overlap 3448678 AAGCGTAATATCAAA TCGGATGGCGAT ACGAC GTCGCCATCCGA TCTTTTTATACGATA ygjH 3449046 - 3448714 - | hypothetical protein UTI89_C3512 3448656 - 3449066 + | hypothetical protein UTI89_C3514 3449153 - 3449335 + | hypothetical protein TERM 4646 3450192 - 3450174 - gf 100 -10.2 -4.7373 | opp_overlap 3450186 CTAGTGTATGAAAAA GCCCGCGA TGG TCGCGCGC TGCCGCTGTTGGTCT ebgR 3449265 - 3450248 + | DNA-binding transcriptional repressor EbgR TERM 4647 3450255 - 3450297 + G 100 -11.4 -4.73614 | gap 1, overlap 3450256 3450257 ACCCGTTAAATCCCC TTGCA-CGCTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC TERM 4648 3450256 - 3450296 + G 86 -12.7 -3.43084 | gap 1, overlap 3450255 3450257 CCCGTTAAATCCCCT TGCA-CGCTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCC GTTTATTTTCGTGAT TERM 4649 3450257 - 3450295 + G 100 -16.2 -2.64766 | gap 1, overlap 3450256 3450255 CCGTTAAATCCCCTT GCA-CGCTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGC CGTTTATTTTCGTGA TERM 4650 3450572 - 3450584 + G 91 -7.7 -5.03314 | GCTCTTAAGCGGTCA GTGGA ATT TCCAC TTTTTTGACCATCCG TERM 4651 3451255 - 3451242 - g 75 -4.5 -4.74103 | opp_overlap 3451242 3451236 TTGGCAATTGAAAAA CTGAC CAGC GCCAG TTTTGCTTTTACTGT TERM 4652 3451498 - 3451463 - g 72 -9.8 -3.41527 | gap 1 CAACCGCCACGACAA CGATC-ATCGCAAAGGC CGC GCCGTTGGGATGGATCG CGTCGAGAAAGATCT TERM 4653 3452395 - 3452373 - g 72 -7.6 -3.93664 | ACGCAACAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTACA ebgA 3450255 - 3453524 + | cryptic beta-D-galactosidase subunit alpha TERM 4654 3453939 - 3453951 + G 72 -7.7 -3.96216 | opp_overlap 3453936 3453935 3453939 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 3453521 - 3453970 + | cryptic beta-D-galactosidase subunit beta TERM 4655 3454007 - 3453971 - f 76 -8 -4.27512 | overlap 3453974 3453977 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCACTGCTA CCCTACTCATTTTCG TERM 4656 3454004 - 3453974 - f 84 -9.7 -4.24183 | overlap 3453971 3453977 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCACTG CTACCCTACTCATTT TERM 4657 3454001 - 3453977 - f 81 -12.2 -3.09866 | overlap 3453974 3453971 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCA CTGCTACCCTACTCA TERM 4658 3454279 - 3454265 - g 72 -5.6 -4.56775 | ACGCGTGGGTAAAAA GTTCGC TGG GCGGAC GTTGGGCATTTATTA TERM 4659 3455034 - 3455022 - g 70 -4.7 -4.45664 | CGAACTGAACGAAAA CGGCG TTC CGGCG CGCGCAGCGTGGATC ygjI 3454033 - 3455466 + | putative oxidoreductase TERM 4660 3455491 - 3455527 + F 93 -11.8 -4.04922 | gap 1, opp_overlap 3455486, overlap 3455485 3455493 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAATAG TTTCTGCCTTTATAT TERM 4661 3455493 - 3455524 + F 89 -14.6 -3.05274 | opp_overlap 3455486, overlap 3455491 3455485 AAAAATGAGCAGGCA TTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAA TAGTTTCTGCCTTTA ygjJ 3455600 - 3456670 + | hypothetical protein TERM 4662 3457278 - 3457255 - g 78 -8.2 -4.15833 | gap 1 ACTATCAGCGCAAAA TCAGCGCCACC CGT GATGGC-CTGA AAGTCACCTTTGGCA ygjK 3456687 - 3459038 + | putative glycosyl hydrolase ygjL 3459209 - 3461227 + | NADPH 2,4-dienoyl-CoA reductase TERM 4663 3461330 - 3461299 - T 100 -21.8 -2.52795 | opp_overlap 3461309 3461325, overlap 3461309 AATGTGCTGAACGTA TGCCAGATAAGGCG TTTA CGCCTTATCTGGCA GGTAGCTGCCAATCT ygjO 3462481 - 3461345 - | putative ribosomal RNA small subunit methyltransferase D ygjP 3462530 - 3463069 + | hypothetical protein TERM 4664 3463304 - 3463327 + G 76 -7.4 -4.24342 | gap 1, overlap 3463304 3463307 CTGGAGCGATGTCAA CGC-CGTTCCG GCG CGGAACGTGGG TTTATTGCTGGGGGC TERM 4665 3463307 - 3463323 + G 77 -12.3 -2.77283 | overlap 3463304 3463304 GAGCGATGTCAACGC CGTTCCG GCG CGGAACG TGGGTTTATTGCTGG ygjQ 3463137 - 3463838 + | hypothetical protein TERM 4666 3464688 - 3464670 - g 70 -3.8 -4.65895 | opp_overlap 3464670 CTGGTGATTGAAAAA CTGTCTGA ATG CCAGAAAG TTTGCTTTGTACCGC ygjR 3463899 - 3464903 + | oxidoreductase YgjR TERM 4667 3465061 - 3465080 + F 100 -10.8 -5.56673 | opp_overlap 3465061 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4668 3465080 - 3465061 - f 83 -10.8 -3.66178 | opp_overlap 3465061 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4669 3465119 - 3465098 - f 70 -10.1 -2.52464 | opp_overlap 3465100 TTTTGTTGTAAGTGA GACCTTGCC GGAA GGCGAGGTC TATGCATAAAAAGCA TERM 4670 3465136 - 3465161 + F 100 -9.7 -5.76633 | opp_overlap 3465136 ATGCATAAAAAGCAG CGGCTGATGTC TTCC GACGTTGGCCG TTTTTTTATGTGTAA ygjT 3465186 - 3466151 + | hypothetical protein ygjU 3466475 - 3467719 + | serine/threonine transporter SstT TERM 4671 3467727 - 3467751 + T 100 -14.3 -4.44974 | GTAACTAATACTTAG CCCCTTTCGTC TAC GGCGGAAGGGG TTTTCTCCACTTTAA ygjV 3468274 - 3467723 - | hypothetical protein TERM 4672 3468306 - 3468330 + r 100 -10 -5.4505 | opp_overlap 3468306 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC TERM 4673 3468330 - 3468306 - R 100 -12.9 -4.21922 | opp_overlap 3468306 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC uxaA 3469844 - 3468357 - | altronate hydrolase TERM 4674 3468533 - 3468559 + g 77 -8.7 -4.11216 | TCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA uxaC 3471334 - 3469859 - | glucuronate isomerase TERM 4675 3470078 - 3470057 - G 72 -7.9 -3.88291 | opp_overlap 3470058 3470070, overlap 3470070 CAGCATGCCGACAAA GCGGCTCAG CAGA CCGAGCTGC GCCAGTTGGGTCATC TERM 4676 3472612 - 3472632 + G 72 -8.9 -3.83502 | overlap 3472598 3472616 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTGAACCTG TERM 4677 3472616 - 3472628 + G 73 -9.1 -3.59402 | overlap 3472598 3472612 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTGAA exuT 3471634 - 3473052 + | hexuronate transporter TERM 4678 3473084 - 3473101 + F 100 -12.7 -4.7497 | opp_overlap 3473084 TAGTTTCCCTTCAAA GCCGCCT TCTC AGGCGGC TTTTTCATCACTGCG TERM 4679 3473101 - 3473084 - f 93 -12.7 -3.53224 | opp_overlap 3473084 TAGTTTCCCTTCAAA GCCGCCT TCTC AGGCGGC TTTTTCATCACTGCG TERM 4680 3473743 - 3473716 - g 74 -2.6 -5.0538 | overlap 3473718 CCGTACTGGAAAAAA CTGCACGAACAC ATTG ATGCCCGTACCG TCGATAACTGGTGTG exuR 3473182 - 3473958 + | DNA-binding transcriptional repressor ExuR TERM 4681 3473972 - 3473991 + F 86 -10.7 -4.0942 | opp_overlap 3473962 GAAATTCCTGTCCGA CAGGCGC TACAGT GCGCCTG TTTGTCTCGTCGGTA yqjA 3474303 - 3474965 + | hypothetical protein yqjB 3474969 - 3475352 + | hypothetical protein TERM 4682 3475415 - 3475442 + F 81 -10.6 -3.48924 | opp_overlap 3475415 3475416 3475418, overlap 3475416 3475419 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG TERM 4683 3475416 - 3475441 + F 79 -11.9 -2.6914 | opp_overlap 3475415 3475416 3475418, overlap 3475415 3475419 CTGTCTATGATTAAT GAGGCGGTGGT TAAC ACTACCGCTTC GTTGTCTGGACAATC TERM 4684 3475419 - 3475438 + F 77 -10 -3.49618 | opp_overlap 3475418 3475416 3475415, overlap 3475416 3475415 TCTATGATTAATGAG GCGGTGGT TAAC ACTACCGC TTCGTTGTCTGGACA yqjC 3475484 - 3475867 + | hypothetical protein yqjD 3475905 - 3476210 + | hypothetical protein yqjE 3476213 - 3476617 + | hypothetical protein TERM 4685 3476657 - 3476679 + G 71 -9.2 -3.54741 | opp_overlap 3476667 3476670 3476671 GCAACTGCTTAGCCA GATCCAGC AACAACG GCTGGATC TTTCCGCCAGTCGTC yqjK 3476607 - 3476906 + | hypothetical protein TERM 4686 3476917 - 3476935 + F 90 -12.4 -3.37071 | GTTAACTTCCTCTCT GGCCGGAG AAA TTCCGGCC TTATCCCTCAAATTT TERM 4687 3477072 - 3477061 - f 75 -4.4 -4.89054 | overlap 3477064 TGCACAAAAAAACAA TCAG CAGC CTGA GCGGCGCAGTGGAGA TERM 4688 3477331 - 3477341 + G 82 -3.2 -5.27335 | overlap 3477329 CTGCGGGCTTTACGC TGCT GAC GGCA TTTTTATTTCACAGC yqjF 3477081 - 3477485 + | hypothetical protein TERM 4689 3477513 - 3477530 + F 90 -9.1 -4.87626 | opp_overlap 3477513 CTTAACGATAAAAAA CGAGGGG GAAG CTCCTCG TTTTTGCTATTGGAG TERM 4690 3477530 - 3477513 - f 91 -6.9 -5.37345 | opp_overlap 3477513 CTTAACGATAAAAAA CGAGGGG GAAG CTCCTCG TTTTTGCTATTGGAG yqjG 3477555 - 3478541 + | putative transferase TERM 4691 3478564 - 3478547 - f 100 -11.3 -5.40072 | opp_overlap 3478547 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA TERM 4692 3478547 - 3478564 + F 78 -11.3 -2.8664 | opp_overlap 3478547 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA yhaH 3478803 - 3479192 + | hypothetical protein TERM 4693 3479190 - 3479228 + T 78 -8.5 -4.13767 | gap 1, opp_overlap 3479196, overlap 3479192 3479196 3479200 AAACTGGAACAAGAA TAAT-AATTAAGCACCTT GTAA AAGGTGCTTAATCGATTA TTTTCCGCTAAAAAG TERM 4694 3479192 - 3479225 + T 70 -6.1 -4.19746 | opp_overlap 3479196, overlap 3479190 3479196 3479200 ACTGGAACAAGAATA ATAATTAAGCACCTT GTAA AAGGTGCTTAATCGA TTATTTTCCGCTAAA TERM 4695 3479221 - 3479196 - T 100 -13.5 -4.15654 | opp_overlap 3479196 3479192 3479190 3479200 GAACAAGAATAATAA TTAAGCACCTT GTAA AAGGTGCTTAA TCGATTATTTTCCGC TERM 4696 3479196 - 3479221 + T 86 -13.5 -2.75865 | opp_overlap 3479196, overlap 3479192 3479190 3479200 GAACAAGAATAATAA TTAAGCACCTT GTAA AAGGTGCTTAA TCGATTATTTTCCGC TERM 4697 3479200 - 3479217 + T 72 -9.9 -3.26842 | opp_overlap 3479196, overlap 3479196 3479192 3479190 AAGAATAATAATTAA GCACCTT GTAA AAGGTGC TTAATCGATTATTTT yhaJ 3480122 - 3479226 - | transcriptional regulator YhaJ yhaK 3480227 - 3480928 + | hypothetical protein yhaL 3480945 - 3481115 + | hypothetical protein UTI89_C3545 3482557 - 3481247 - | hypothetical protein TERM 4698 3481963 - 3481952 - G 75 -7.2 -4.36206 | opp_overlap 3481957 AGAATCGAGAATAAA GCGG ATCG CCGC AAACGGGACTTCATT TERM 4699 3482580 - 3482566 - R 70 -2.8 -4.90217 | CAAACATATTAAAAA CCTTAA AAT TTCAGG TAAATCAAGAAAATG yhaO 3483916 - 3482585 - | putative transport system permease protein TERM 4700 3484166 - 3484149 - R 100 -11.3 -6.00086 | AGATCACAAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG TERM 4701 3484195 - 3484178 - R 79 -9.9 -3.84961 | overlap 3484190 CACCCAAGGATGAAA GCTGACA GCAA TGTCAGC CGCAGACCACTTTAA tdcG 3485561 - 3484191 - | L-serine dehydratase 1 TERM 4702 3485620 - 3485586 - R 91 -11.5 -3.72576 | gap 1, overlap 3485600 TTGCCGTTCAGTAAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCCTTACGCACT yhaR 3486079 - 3485627 - | hypothetical protein tdcE 3488324 - 3486030 - | keto-acid formate acetyltransferase tdcD 3489578 - 3488358 - | propionate/acetate kinase TERM 4703 3489392 - 3489422 + g 70 -11 -2.74144 | overlap 3489392 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA TERM 4704 3489392 - 3489423 + g 73 -9.4 -3.57263 | gap 1, overlap 3489392 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT tdcC 3490923 - 3489592 - | threonine/serine transporter TdcC tdcB 3491934 - 3490945 - | threonine dehydratase TERM 4705 3490997 - 3491018 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA TERM 4706 3491581 - 3491562 - G 70 -6.4 -4.21908 | opp_overlap 3491578 TATCACCATGCAAAA CGACTTCT GCGG AGTAGTCG CACGTTGCCGCGACT tdcA 3492971 - 3492033 - | DNA-binding transcriptional activator TdcA tdcR 3493161 - 3493505 + | DNA-binding transcriptional activator TdcR TERM 4707 3494062 - 3494035 - T 100 -15 -4.25104 | opp_overlap 3494042, overlap 3494042 CCCTGTGCACCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAATCAGGTGAAA TERM 4708 3494055 - 3494042 - T 93 -9.5 -5.1166 | opp_overlap 3494042, overlap 3494035 CACCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA TERM 4709 3494042 - 3494055 + T 91 -9.5 -4.67353 | opp_overlap 3494042 3494035 CACCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA yhaD 3495705 - 3494479 - | glycerate kinase I TERM 4710 3495647 - 3495658 + g 75 -7.2 -4.34263 | opp_overlap 3495647 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 3496611 - 3495721 - | tartronate semialdehyde reductase TERM 4711 3496281 - 3496295 + g 77 -10 -3.57561 | overlap 3496275 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA yhaF 3497411 - 3496641 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase yhaU 3498761 - 3497427 - | galactarate transporter TERM 4712 3498061 - 3498075 +