TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.489748 %AT, 4018673 nt, 33043 terms. Intergenic: 0.571867 %AT, H2T: 605053 nt, 4171 terms; T2T: 134565 nt, 2579 terms; H2H: 209595 nt, 2617 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|218547440|ref|NC_011740.1| Escherichia fergusonii ATCC 35469, complete genome (length 4588711) thrL 58 - 123 + | thr operon leader peptide TERM 1 170 - 148 - f 100 -12.7 -5.69068 | opp_overlap 148 GAAAAACAGAAAAAA GCCCGCACC TGAAC AGTGCGGGC TTTTTTTTCGACCAA TERM 2 148 - 170 + F 100 -12 -5.75342 | opp_overlap 148 GAAAAACAGAAAAAA GCCCGCAC CTGAACA GTGCGGGC TTTTTTTTCGACCAA TERM 3 2081 - 2067 - g 77 -7.1 -4.5538 | AGAAAACTTACAAAA CCTGC TGAAT GCAGG GGATGAGTTACTGCA thrA 205 - 2667 + | fused aspartokinase I ; homoserine dehydrogenase I TERM 4 2929 - 2907 - g 72 -6.2 -4.42464 | AACTGGGTAAACAAA TTCCAGTGGC AAT GACCCTGGAA AAAAATATGCCGATC thrB 2669 - 3598 + | homoserine kinase TERM 5 3765 - 3783 + G 72 -7.4 -3.97042 | overlap 3751 ATTTTGTGCCACGTA GCGCAAAG ATT CTTTCCGC TTTCATTGGTGATGA thrC 3602 - 4888 + | threonine synthase TERM 6 4896 - 4929 + F 100 -11.1 -4.66609 | overlap 4897 GCGTTTAACGTTCTT CGCCGGAATAGAC CTGACCGT GTCTATTCCGGCA TTTTTACATCAAATG TERM 7 4897 - 4928 + F 100 -14.6 -3.39483 | overlap 4896 CGTTTAACGTTCTTC GCCGGAATAGAC CTGACCGT GTCTATTCCGGC ATTTTTACATCAAAT yaaX 5101 - 5400 + | conserved hypothetical protein; putative exported protein TERM 8 5409 - 5436 + T 100 -13.6 -3.99374 | opp_overlap 5414, overlap 5412 5415 TCGTTAATTCACCTG GAATAGCGCTAC TTGC GTAGCGTTATTC TTATTGTTCGTGACG TERM 9 5412 - 5433 + T 85 -9.5 -4.1157 | opp_overlap 5414, overlap 5409 5415 TTAATTCACCTGGAA TAGCGCTAC TTGC GTAGCGTTA TTCTTATTGTTCGTG TERM 10 5415 - 5430 + T 83 -9 -4.15654 | opp_overlap 5414, overlap 5412 5409 ATTCACCTGGAATAG CGCTAC TTGC GTAGCG TTATTCTTATTGTTC yaaA 6210 - 5437 - | conserved hypothetical protein; family UPF0246 TERM 11 6052 - 6067 + g 91 -7.6 -5.04601 | overlap 6038 ATCAGCAAGCTTGTC GCTGAT ATTC ATCAGC TTTTTAATTTGTGGA yaaJ 7827 - 6280 - | putative amino acid sodium/proton transporter talB 7987 - 8940 + | transaldolase B TERM 12 8947 - 8976 + F 81 -12.2 -2.5294 | opp_overlap 8946, overlap 8946 8944 CTGCTGTAATCATAC TTAGCGTGACCG TAAATT CGGTCACGCTAC CTCTTCTCAAACCTG mogA 9055 - 9642 + | molybdochelatase MogA, involved in Moco biosynthesis TERM 13 9646 - 9666 + T 95 -12.5 -3.33737 | opp_overlap 9647, overlap 9647 GTTAAAGAATAAAAA ATCCCCCCG GTG CGGGGGGAA TTCTAACAATTAGTG TERM 14 9647 - 9665 + T 100 -16 -2.59921 | opp_overlap 9647, overlap 9646 TTAAAGAATAAAAAA TCCCCCCG GTG CGGGGGGA ATTCTAACAATTAGT TERM 15 9665 - 9647 - T 100 -16 -5.72254 | opp_overlap 9647 9646 TTAAAGAATAAAAAA TCCCCCCG GTG CGGGGGGA ATTCTAACAATTAGT yaaH 10242 - 9676 - | conserved hypothetical protein; putative inner membrane protein associated with acetate transport TERM 16 10126 - 10116 - G 71 -2.4 -5.0133 | TACCGCCGTAAAAAA TGCC CAT GGCG ATAATGATACCGTCG TERM 17 11576 - 11542 - g 72 -7.8 -3.9122 | CAGCGCCTGAAAGAA GCGGCAGAAAAAGCGA AAA TCGAACTTTCTTCCGC TCAGCAGACCGACGT dnaK 10750 - 12666 + | chaperone Hsp70, co-chaperone with DnaJ TERM 18 12730 - 12691 - f 100 -18 -2.91467 | gap 1, opp_overlap 12692 AAACGGGTAATTATA CTGACACGGGCGAAGAGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAA TERM 19 12692 - 12729 + F 100 -19.3 -3.25823 | gap 1, opp_overlap 12691 AACGGGTAATTATAC TGACACGGGCGAAGAGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 20 12836 - 12823 - g 71 -2.3 -4.98531 | GCGTGAAATCAAAAA GGCCT ACAA ACGCC TGGCCATGAAATACC TERM 21 13830 - 13840 + G 70 -6.8 -4.03811 | overlap 13832 AGCACAACAGCCCGC GCTC AAA GAGC TTCTTTGATGGTGTG dnaJ 12755 - 13885 + | chaperone Hsp40, co-chaperone with DnaK TERM 22 13914 - 13897 - T 100 -12.7 -4.09739 | CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CAGGTAAAAAACAGG TERM 23 13983 - 13960 - T 70 -8 -3.58343 | opp_overlap 13961 13962, overlap 13961 GCGAGCACCTGTAAA GTGGCGGGGA TCAC TCCCCGCCGT TGCTCTTACTCGGAT TERM 24 13961 - 13982 + T 100 -13.7 -3.39449 | opp_overlap 13960 13961, overlap 13962 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 25 13982 - 13961 - T 81 -11.5 -2.74792 | opp_overlap 13961 13962, overlap 13960 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 26 13962 - 13981 + T 100 -15 -2.63348 | opp_overlap 13961 13960, overlap 13961 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG mokC 14198 - 13989 - | regulatory protein for HokC, overlaps CDS of hokC TERM 27 14206 - 14238 + H 71 -4.9 -4.64844 | gap 1, opp_overlap 14174 TTCAGCATATAGGGG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC TERM 28 14878 - 14891 + G 82 -2.4 -5.31855 | TATGGATTAACGATG CACT TATGGC AGTG TTTTTCTTATTGGTC nhaA 14682 - 15848 + | sodium-proton antiporter TERM 29 15865 - 15884 + F 90 -10.7 -3.98661 | opp_overlap 15862 15865 CGGTACAAGAGAGCA GGGAGCC ATGATC GGCTCCC TTTGTGGTACATATC TERM 30 15884 - 15865 - f 81 -11.4 -2.78526 | opp_overlap 15865, overlap 15862 CGGTACAAGAGAGCA GGGAGCCA TGAT CGGCTCCC TTTGTGGTACATATC nhaR 15886 - 16815 + | DNA-binding transcriptional activator TERM 31 16867 - 16880 + T 100 -9.5 -5.40474 | opp_overlap 16867 GTGGACATAAAAAAA CCCGC CAGA GCGGG TTTTTTTACAAAGCT TERM 32 16880 - 16867 - T 100 -9.5 -5.71712 | opp_overlap 16867 GTGGACATAAAAAAA CCCGC CAGA GCGGG TTTTTTTACAAAGCT rpsT 17174 - 16911 - | 30S ribosomal subunit protein S20 yaaY 17277 - 17495 + | hypothetical protein TERM 33 18394 - 18382 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 17503 - 18444 + | bifunctional riboflavin kinase and FAD synthetase TERM 34 18653 - 18635 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 35 19642 - 19621 - g 71 -9.5 -3.55622 | gap 1 GTTAACGTCTTCAAA GCG-AACGAC ATC GTCGTTGCGC TGCTACAGGAAAAAG TERM 36 19705 - 19682 - g 81 -8.8 -4.38712 | overlap 19659 19683 TGCACGTTGAGAAAA TGCAGCACAG CTAT CCGTGCTGCT GGCGTCACAAAACGC TERM 37 19704 - 19683 - g 81 -12.3 -3.22906 | overlap 19659 19682 GCACGTTGAGAAAAT GCAGCACAG CTAT CCGTGCTGC TGGCGTCACAAAACG TERM 38 21136 - 21111 - g 71 -10.5 -2.88069 | gap 1, overlap 21108 TGCAGACTATAACGA CGCCCCTGCTGA TGC TCAGCAGAG-CG AAGTACTCAAAGGGC ileS 18487 - 21303 + | isoleucyl-tRNA synthetase lspA 21303 - 21797 + | prolipoprotein signal peptidase (signal peptidase II) TERM 39 21982 - 21959 - g 70 -6.7 -4.14243 | CACTTCACGCTAAAA CTCGACGAT GGCACT ACCGCCGAG TCTACCCGCAACAAC fkpB 21905 - 22354 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) TERM 40 22494 - 22520 + G 70 -5.9 -4.1552 | gap 1 AACCGCTACGTGGTC GATAG-CCTGCG CGAG CGTGGGGCTATC TTTATTGAGCAGATC ispH 22356 - 23306 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein TERM 41 23354 - 23335 - f 85 -9.3 -4.15453 | opp_overlap 23335 23352 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 42 23335 - 23354 + F 100 -9.3 -5.24129 | opp_overlap 23335, overlap 23352 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 43 23574 - 23605 + G 75 -11.6 -2.87931 | gap 1 CCCAGGGAGCCTCCG TGCCGCTGGTACGCG CAC CGCGTAAT-GCGGCA TCTGTACACGGTGAA rihC 23372 - 24286 + | ribonucleoside hydrolase 3 EFER_0024 24304 - 24669 + | hypothetical protein TERM 44 24704 - 24673 - T 76 -9.6 -3.53019 | gap 1, overlap 24671 TCAGAAAGTTAAACA GCACCG-AACAGT AAGCAGA ACTGTTGCGGTGC CTGGCGATTGTTATT citB 25398 - 24715 - | DNA-binding response regulator in two-component regulatory system with citA citA 27019 - 25391 - | sensory histidine kinase in two-component regulatory system with citB TERM 45 27153 - 27123 - R 100 -17 -2.6838 | opp_overlap 27129 27148, overlap 27129 TTTAAAAAGGAACAG TAAAAAGGCGGGAG TCG CTCCCGCCTTTTGA GGACAAAATTACATT TERM 46 27147 - 27129 - R 100 -16 -4.90136 | opp_overlap 27129, overlap 27123 AAGGAACAGTAAAAA GGCGGGAG TCG CTCCCGCC TTTTGAGGACAAAAT TERM 47 27129 - 27147 + r 100 -16 -4.07687 | opp_overlap 27123 27129 AAGGAACAGTAAAAA GGCGGGAG TCG CTCCCGCC TTTTGAGGACAAAAT oadB 28463 - 27162 - | Oxalacetate decarboxylase beta chain TERM 48 27927 - 27912 - G 75 -5.4 -4.59982 | opp_overlap 27912 GGAGAACGAAATAAA GCCGAA GTAA TTCAGC GTTAATGCTCCCAGC oadA 30257 - 28476 - | Oxaloacetate decarboxylase alpha chain TERM 49 29446 - 29464 + g 76 -3.8 -5.01732 | TATTTCTTGCGTACA TCGCGG AAATAAG CTGCGA TTTTTTCCAGACGTT oadG 30521 - 30273 - | Oxaloacetate decarboxylase gamma chain citP 32012 - 30672 - | Citrate-sodium symporter (Citrate transporter) (Citrate carrier protein) TERM 50 31775 - 31738 - G 74 -2.7 -5.02323 | gap 1, opp_overlap 31761 31764, overlap 31726 31724 31740 31760 CCAGCATAAACAAAA TATGCCGCTACCAGAAAT ATC ATTACTGGT-GCGCCACC AATATATTTGTTAAA TERM 51 31773 - 31740 - G 74 -7.5 -4.12652 | gap 1, opp_overlap 31761 31764, overlap 31726 31724 31738 31760 AGCATAAACAAAATA TGCCGCTACCAGAAAT ATC ATTACTGGT-GCGCCA CCAATATATTTGTTA citC 32272 - 33282 + | citrate lyase synthetase citD 33312 - 33605 + | citrate lyase, acyl carrier (gamma) subunit citE 33527 - 34471 + | citrate lyase, citryl-ACP lyase (beta) subunit TERM 52 34824 - 34810 - g 85 -7.1 -4.82667 | TGAGCACATTAAAAA TGGCG TCATT CGCCA GATCTACACTTCCGG TERM 53 35618 - 35593 - g 70 -10.6 -2.71924 | overlap 35592 GAGTGCGCTGGAAAT TGACGTTAAC TTCAAC GTTAACGTCA TGACTGGTTCCAATG citF 34484 - 36004 + | citrate lyase, citrate-ACP transferase (alpha) subunit TERM 54 36322 - 36312 - g 74 -3.2 -5.00616 | CGCCCCGGCAAAAAA CCTA AAA CAGG CGATGCTACAACTGG citX 36004 - 36555 + | apo-citrate lyase phosphoribosyl-dephospho-CoA transferase TERM 55 37041 - 37051 + G 78 -5.4 -4.74504 | opp_overlap 37035 37041 CAGCAACCAGTAAAA GTGT CGA ACAC TTTTTACATTACGGT TERM 56 37051 - 37041 - g 70 -5.4 -4.36411 | opp_overlap 37041, overlap 37035 CAGCAACCAGTAAAA GTGT CGA ACAC TTTTTACATTACGGT citG 36533 - 37444 + | triphosphoribosyl-dephospho-CoA transferase TERM 57 37449 - 37480 + F 74 -6.6 -4.35742 | overlap 37451 37453 TCGCTGATTAATCTT CCTGTGATTCACCC TGCG GGGTGAATCATATC TTTTACTGATTACCT TERM 58 37451 - 37478 + F 100 -13.6 -3.77927 | overlap 37449 37453 GCTGATTAATCTTCC TGTGATTCACCC TGCG GGGTGAATCATA TCTTTTACTGATTAC TERM 59 37453 - 37476 + F 100 -14 -3.46345 | overlap 37451 37449 TGATTAATCTTCCTG TGATTCACCC TGCG GGGTGAATCA TATCTTTTACTGATT dapB 37603 - 38424 + | dihydrodipicolinate reductase TERM 60 38474 - 38501 + T 84 -6.4 -5.03945 | gap 1, opp_overlap 38478 38479, overlap 38479 GTAATATATTGATTT TAAATGGGCGATA AAG TTTCGCCC-TTTA TTTTTCTGGTTATTA EFER_0039 38761 - 38450 - | hypothetical protein TERM 61 38479 - 38497 + g 93 -8.8 -5.00267 | opp_overlap 38479 38478, overlap 38474 ATATTGATTTTAAAT GGGCGATA AAG TTTCGCCC TTTATTTTTCTGGTT TERM 62 39815 - 39787 - g 76 -3.7 -4.99638 | overlap 39788 39811 AGATGTAGAGAAAAA CGTGGTGATGATC ACC GCCCAGAACCACG GTTTTGCGGTGGATG carA 38879 - 40027 + | carbamoyl phosphate synthetase small subunit, glutamine amidotransferase TERM 63 40898 - 40868 - g 71 -9 -3.54424 | opp_overlap 40868 40869, overlap 40869 CGGTACTGCGTGAAA TCGGCGTTGAAACC GGT GGTTCCAACGTCCA GTTTGCGGTGAACCC TERM 64 42626 - 42607 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC AAAAGTGGCGGCGCG carB 40045 - 43266 + | carbamoyl-phosphate synthase large subunit TERM 65 43316 - 43335 + F 100 -7.8 -5.60993 | opp_overlap 43316 AGTAAATAATCAGAA CGGTTCTC AATT GAGGGCCG TTTTTTTATGCGCAG caiF 43527 - 43922 + | transcriptional activator TERM 66 44031 - 44053 + T 100 -11.2 -4.33165 | overlap 44046 TTGGCGCCACATCCG TCGTCCCCTG CAA CCGGGGGCGA TTTTCCTCCATTTGC caiE 44598 - 44008 - | putative acyl transferase caiD 45446 - 44604 - | crotonobetainyl CoA hydratase caiC 47067 - 45499 - | putative crotonobetaine CoA ligase:carnitine CoA ligase caiB 48342 - 47125 - | crotonobetainyl CoA:carnitine CoA transferase caiA 49555 - 48413 - | crotonobetaine reductase subunit II, FAD-binding TERM 67 48693 - 48709 + g 73 -3.6 -4.7497 | overlap 48694 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 51100 - 49586 - | L-carnitine/gamma-butyrobetaine antiporter TERM 68 50540 - 50554 + g 72 -5.6 -4.56597 | opp_overlap 50532 50540, overlap 50533 GACGATAGTGCCAAA CAAGCC TTT GGCATG TTTTTCACCCACCAG TERM 69 51239 - 51256 + H 89 -6.3 -5.26316 | TCAATGGGTTGCATT CTGTGAT GTAA ATCACGG TTTTTTATCGAGTAA TERM 70 51407 - 51443 + H 76 -9.7 -3.35695 | overlap 51401 TTTTGCTACGCCACG TTTTCAATATTGGTGAG GAG CTTAACAATATTGAAAG TTGGATTTATCTGCG TERM 71 51897 - 51871 - g 85 -10.1 -4.1552 | opp_overlap 51895, overlap 51872 CACTGCCGCAACAAA CGGCGACTGCA CTGGC TGCAGCCGCCC AGAAAGCAGGGTTTG TERM 72 51896 - 51872 - g 87 -13.6 -3.08991 | opp_overlap 51895, overlap 51871 ACTGCCGCAACAAAC GGCGACTGCA CTGGC TGCAGCCGCC CAGAAAGCAGGGTTT fixA 51573 - 52343 + | putative electron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain fixB 52358 - 53299 + | putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like fixC 53350 - 54636 + | putative oxidoreductase with FAD/NAD(P)-binding domain fixX 54633 - 54920 + | putative 4Fe-4S ferredoxin TERM 73 55386 - 55401 + G 70 -6 -4.20106 | CACCGAGTTCTCCAG CACCCG TCAG CGGGCG TTTTCCATCAGCTTT TERM 74 55896 - 55908 + G 76 -9.1 -3.81146 | overlap 55893 GTGGCTAAACACTGC CGGAC GGC GTCCG TTGTTGATTGGCAGC yaaU 54979 - 56310 + | putative transporter kefF 56418 - 56948 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 75 57920 - 57910 - g 72 -6.8 -4.1552 | opp_overlap 57910 57909 57912 CAGGTGCCGAATAAA CAGC GTC GCTG GTTTGCGGTGCTGTT kefC 56941 - 58803 + | potassium:proton antiporter folA 58996 - 59475 + | dihydrofolate reductase TERM 76 59525 - 59551 + G 87 -13.8 -3.09015 | GTCTGATTTTACCAG TGAGCGCGATTT TGT GAGTCGCGCTCA TTGCGTAGGTCTAAA EFER_0057 59496 - 59675 + | putative antitoxin of gyrase inhibiting toxin-antitoxin system EFER_0058 60241 - 59792 - | hypothetical protein TERM 77 59861 - 59851 - G 75 -5.4 -4.72272 | overlap 59854 TTTGGTCATCAAAAA CATC ACC GATG ATGTCAGGGATTTCA EFER_0059 60876 - 60277 - | hypothetical protein apaH 61749 - 60901 - | diadenosine tetraphosphatase apaG 62133 - 61756 - | protein associated with Co2+ and Mg2+ efflux TERM 78 61844 - 61865 + g 72 -8.7 -3.71527 | gap 1, overlap 61857 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC ksgA 62957 - 62136 - | S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase pdxA 63943 - 62954 - | 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent TERM 79 63809 - 63792 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG surA 65229 - 63943 - | peptidyl-prolyl cis-trans isomerase (PPIase) TERM 80 64254 - 64301 + g 79 -10 -3.7795 | gap 1, opp_overlap 64250 64249, overlap 64251 64241 CCTGGGAGAACTCTT TCGCTGC-GGCAGCAAAAGTCGT TTT ACCACTTTTGATATCAGCAGCGA TTTGCTCCAGTTTCA imp 67634 - 65283 - | exported protein required for envelope biosynthesis and integrity TERM 81 65922 - 65906 - G 70 -5.9 -4.23674 | TTTGACCAACAGAAA CGTTAAA ACG TTCAACG GCATTTTCATCATAT TERM 82 67132 - 67155 + g 82 -9 -4.17425 | gap 1, overlap 67122 CAGGAGGTAAAGCTG CCGTTAT-CCA GAA TGGTATAACGG TTTTCGCCTCGTTGT TERM 83 67630 - 67642 + g 71 -2 -4.91084 | GTGGGGATACGTTTT TTCA TACGT TGAA TTTTATTGTTCCATC TERM 84 68024 - 68010 - g 70 -7.1 -4.11216 | CCCGCAGCCGTAAAA TGGCG TGGTT CGCCA ATCAGCGTGAGCGTC TERM 85 68027 - 68047 + G 74 -3.1 -5.00884 | opp_overlap 68029, overlap 68035 GCGTGGTTCGCCAAT CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 67889 - 68704 + | DnaJ-like protein, membrane anchored TERM 86 68745 - 68724 - T 82 -10.2 -3.72324 | CAGGGCGAGTAAGAA GAGAAGGC CTTAAC GCCTTCTC CTGCCTACCTAATCG rluA 69434 - 68775 - | pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) TERM 87 69118 - 69090 - G 70 -11 -2.74144 | overlap 69089 69092 69109 TGGCCAGTCGCAAAT CAGCGGCAGATC GACCA GACCTTCCGCTG GGGATGGGTGCCCCC hepA 72352 - 69446 - | RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) TERM 88 69495 - 69507 + g 76 -9.1 -3.77219 | TCCAGACGCCAACCT GCCTG ATC CAGGC TTTCCATTACCTGCT TERM 89 70334 - 70346 + g 78 -5.5 -4.7373 | overlap 70326 70332 CTTCAACGCCTCGTG CTGCT CGC GGCAG TTTTTGATCAGATCG TERM 90 70962 - 70977 + g 70 -6 -4.18018 | overlap 70956 TAGAGCATATCGCGA GCGCGG TCTT CCGCAC TTTTACGTGCGCCCA polB 74867 - 72516 - | DNA polymerase II TERM 91 72582 - 72571 - G 77 -5.8 -4.64676 | overlap 72572 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 92 73114 - 73129 + g 76 -9 -3.85698 | AGTGCGCTAGTCAGC CGTTGC TGTT GCAACG TTTCTGCCCACCAGG TERM 93 74888 - 74908 + r 87 -8.3 -4.43477 | opp_overlap 74888 AAATCCAATAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTTGGTTGACTGGC TERM 94 74908 - 74888 - R 100 -8.3 -5.52096 | opp_overlap 74888 AAATCCAATAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTTGGTTGACTGGC araD 75637 - 74942 - | L-ribulose-5-phosphate 4-epimerase TERM 95 75718 - 75736 + r 76 -11 -2.70932 | opp_overlap 75707 75710 75709 ATAAGACGCGTCAGC GTCGCATC AGG GATGCGGC TACTTAGCGACGAAA araA 77242 - 75740 - | L-arabinose isomerase TERM 96 76374 - 76337 - G 71 -9.1 -3.53012 | gap 1, opp_overlap 76360, overlap 76303 GCCTTCGCCCGCAAA GCCGTAGCCCTGCTGCAT CAG ACGCTGCACGGCCA-GGC CAGGAAGCTGTTTCA TERM 97 77248 - 77236 - G 71 -3.3 -4.8269 | CATAATTATCAAAAA TCGTC ATC GTCGA GTCCTTATAGAGTCG araB 78953 - 77253 - | L-ribulokinase TERM 98 77490 - 77471 - G 71 -2.8 -4.7373 | gap 1, overlap 77472 77473 CGACGGCAGCAAAAA TCGCCGCAC CGA GCGCG-CAA CACTGATCAGAGGCG TERM 99 77568 - 77592 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTGACGGCGATC TERM 100 78315 - 78292 - G 70 -5.3 -4.41616 | gap 2, opp_overlap 78295, overlap 78294 AGTTCGTCAAAGAAA CTGGCTGGCGG CAGG CCGCC--CCAG CTTTCGTGCCACAGC araC 79291 - 80136 + | DNA-binding transcriptional dual regulator TERM 101 80163 - 80140 - f 86 -9.7 -3.96068 | opp_overlap 80144 80144, overlap 80144 GGATGTGAATAATAA GAAAGAAGG GGACCT CCTTCTTTC ATCACCCGACGTTAT TERM 102 80156 - 80144 - f 73 -5.5 -4.57882 | opp_overlap 80144 80144, overlap 80140 GTGAATAATAAGAAA GAAGG GGA CCTCC TTCTTTCATCACCCG TERM 103 80232 - 80264 + F 90 -4.4 -5.63012 | gap 1, overlap 80236 CAACCAAATATTAAT TATT-TTTAGGTGAA TCGT TTCGCCTGAATAATA TTTTTGTTTGTTTTT EFER_0074 80358 - 81590 + | Putative transcriptional regulator of sugar metabolism TERM 104 82527 - 82496 - g 72 -4.4 -4.64861 | overlap 82498 TGGTGCTAAAACAAA TTGCTGATGCCGCA GATT TCCAGCGTCAACAA CTCAAATATTAATAT EFER_0075 81616 - 82539 + | putative dihydrodipicolinate synthetase (DHDPS) TERM 105 83407 - 83390 - g 72 -7.7 -3.88001 | gap 1, opp_overlap 83390 83388 TCTCACAAAAATTAA CTGCC-GC TAT GCAGGCAG TGTTTGCGCAGGGGA EFER_0076 82594 - 83547 + | putative periplasmic binding protein TERM 106 83577 - 83555 - f 76 -10.5 -3.00476 | AGGGTTAATCAGACA GGGCGGTGA ATATA TCGCCGCCC AATTACAGGGATAGC EFER_0077 83560 - 84033 + | hypothetical protein TERM 107 84394 - 84406 + G 72 -6.3 -4.32583 | TCGGTCATTGGTGGC GTGAT TGG ATCAC TTATTTTGATGTTGG TERM 108 84981 - 84969 - g 76 -9.1 -3.75024 | CTCGAGCAGTAACAA CGCCA GCC TGGCG GGGAGTTGGATCCCT TERM 109 85462 - 85472 + G 71 -2.4 -4.98128 | overlap 85443 85458 CCGGTATCTATGGCA CTGG CTG CCTG TTTCTTTTTGGTTGT EFER_0078 84043 - 85530 + | hypothetical protein TERM 110 85544 - 85566 + F 90 -12.8 -2.53995 | opp_overlap 85549, overlap 85549 AATCCGCTGTTTTCA GACCATCCAT GTT GTGGATGGTC TGCCTTCCCCTAAGT TERM 111 86252 - 86271 + G 76 -4.2 -4.92314 | opp_overlap 86249, overlap 86254 GCGAGTTTAAATGGT TGCTGCTG GCAA CAGCGGTG TTTTTGTGGGTTGGT TERM 112 86254 - 86269 + G 70 -6.8 -4.07789 | opp_overlap 86249, overlap 86252 GAGTTTAAATGGTTG CTGCTG GCAA CAGCGG TGTTTTTGTGGGTTG yabI 85714 - 86478 + | conserved hypothetical protein; putative inner membrane protein thiQ 87257 - 86559 - | thiamin transporter subunit ; ATP-binding component of ABC superfamily thiP 88851 - 87241 - | fused thiamin transporter subunits of ABC superfamily: membrane components TERM 113 87331 - 87319 - G 78 -10.5 -3.48036 | CAGCAGTAGAATTAA CGCGG TCA CCGCG CCATCCTGGCTACGA tbpA 89810 - 88827 - | thiamin transporter subunit ; periplasmic-binding component of ABC superfamily TERM 114 89674 - 89684 + g 74 -3.2 -5.00616 | TCGCAATTACAGTCG GCTT CAA AGGC TTTTTTCACCACCGG TERM 115 89981 - 90003 + r 73 -8.5 -3.59979 | gap 1, opp_overlap 89977 ACCAGCAATCATGGA TCCG-GTGGT GCAA ACCACGCGGA TTTAAAATCGAACCA sgrR 91629 - 89974 - | DNA-binding transcriptional regulator TERM 116 91341 - 91357 + g 72 -10.9 -3.03443 | CTGCTTTGTCGCCAA CCAACTG CAC CAGTTGG TCTATATGGTCCTGC TERM 117 91510 - 91477 - G 90 -14.7 -2.73364 | gap 1, opp_overlap 91478 TTCCCACGTCAACCA GC-CACGCTCCTGCAT GGT ATTCAGGAGCGTGCGC ATATGGCGACGGGAA TERM 118 91892 - 91914 + H 100 -12 -5.88565 | opp_overlap 91889 GGTGTAAAATCACCC GCCAGCAGAT AAT ACCTGCTGGC TTTTTTTATTCTCGC setA 91949 - 93127 + | broad specificity sugar efflux system TERM 119 93171 - 93151 - f 78 -5.4 -4.93296 | opp_overlap 93151 93151 93145, overlap 93153 GGATGAGTATAAAAA GGGGGA GAAAATGCT TCCCCC TTTTATCGTATACCG TERM 120 93151 - 93171 + F 74 -6.1 -4.50976 | opp_overlap 93151 93153, overlap 93145 93151 GGATGAGTATAAAAA GGGGGAG AAAATGC TTCCCCC TTTTATCGTATACCG TERM 121 94555 - 94524 - f 100 -10.4 -4.28049 | opp_overlap 94523 94521 94524 94526 TTTAAAAGTTTAAAA TATTTTTGCATGTA TCTT TACAGGCAAAAATA CTCTTTCTTCTTATT TERM 122 94524 - 94555 + F 76 -10.4 -2.91565 | opp_overlap 94524, overlap 94523 94521 94526 TTTAAAAGTTTAAAA TATTTTTGCATGTA TCTT TACAGGCAAAAATA CTCTTTCTTCTTATT TERM 123 95208 - 95227 + G 71 -9.4 -3.5002 | overlap 95204 CTGATATTAATTTTA TTCCTGTT ATTC AACAGGAA TTGGTTGTGGTTACC EFER_0088 94730 - 95626 + | Transcriptional regulator, LysR family TERM 124 95656 - 95630 - T 100 -16.6 -3.61517 | AGTTTTCGGTAATAA TGCGCCCGGCAT TAA ATTCCGGGCGCA AAGCCATCAGGAAAG aroD 96430 - 95663 - | 3-dehydroquinate dehydratase (3-dehydroquinase) (Type I DHQase) TERM 125 96456 - 96473 + r 86 -6.9 -5.00616 | TAAATCTTCAGGCGG CAGCCGG AACG CGGGCTG TTTTTTGCGCGGCAC EFER_0090 97740 - 96448 - | putative transporter; MFS superfamily TERM 126 96543 - 96532 - GR 72 -7.2 -3.96892 | overlap 96520 AAGGGCTATCACAAA GCCG ATGA CGGC GATTAAGAGATCGAA TERM 127 97064 - 97092 + gr 95 -6.7 -5.41143 | opp_overlap 97068 TTTGTCTGAGGTGCA GTAACTGTTGCGG TTT TTGCGACAGTTTC TTTTTTTGCCCGATG EFER_0091 98533 - 97670 - | putative Quinate/shikimate dehydrogenase EFER_0092 100564 - 98552 - | NADH:flavin oxidoreductase TERM 128 98666 - 98678 + g 72 -6.3 -4.38141 | ACTATCGCCTATATT CATCA TTT TGATG TTGTTTTCTCTGGCC TERM 129 100154 - 100166 + g 90 -6.9 -5.10461 | ATGAGTCATCGGGCG CGGCG TGT TGCCG TTTTTCTTCGATGGC TERM 130 100823 - 100802 - R 89 -11.5 -3.56862 | opp_overlap 100794, overlap 100803 ATAAACGCGGGGAAA GGCCCGGTC ATTT GACCGGGCA AGGGGATTAATTCAT TERM 131 100822 - 100803 - R 100 -15 -2.73635 | opp_overlap 100794, overlap 100802 TAAACGCGGGGAAAG GCCCGGTC ATTT GACCGGGC AAGGGGATTAATTCA leuD 101435 - 100830 - | 3-isopropylmalate isomerase subunit TERM 132 101266 - 101276 + g 72 -4.6 -4.72272 | ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCCAGAAA leuC 102846 - 101446 - | 3-isopropylmalate isomerase subunit, dehydratase component TERM 133 102365 - 102377 + g 76 -9.1 -3.75629 | ATAGTCTTCGCACGG CCCTG TTT CAGGG TTTGCGTTGCCAGTA leuB 103940 - 102849 - | 3-isopropylmalate dehydrogenase leuA 105511 - 103940 - | 2-isopropylmalate synthase TERM 134 104645 - 104656 + g 72 -5.8 -4.41616 | TGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 135 105361 - 105351 - G 72 -6.8 -4.19817 | TGCACCGATTCAAAA TCGC CCG GCGA AGAGACGGGGAAACC TERM 136 105559 - 105576 + r 100 -14.1 -5.65927 | opp_overlap 105559 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG TERM 137 105576 - 105559 - R 100 -14.1 -5.60993 | opp_overlap 105559 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG leuL 105687 - 105601 - | leu operon leader peptide TERM 138 105847 - 105862 + H 75 -2.4 -5.38549 | opp_overlap 105847 105849, overlap 105848 105849 TGCAAAATTAATACA TAGGCC AGAT GGCCAG TTTTTATTATTTGAC TERM 139 106078 - 106096 + H 73 -6 -4.41158 | opp_overlap 106078, overlap 106075 TTAAACCACTAATTA TCATTCAC CCG GTGCATGA TTGTTTATTTGTATG leuO 106327 - 107289 + | DNA-binding transcriptional activator TERM 140 107295 - 107332 + F 91 -7.1 -5.41143 | opp_overlap 107305, overlap 107301 107305 CCGCCATTAATCTTA TCGCAATAAACCAGATC GAAT GGTCTGGTTTATTCTGC TTTTTTTAAAAAATA TERM 141 107301 - 107326 + F 95 -11.3 -3.86495 | opp_overlap 107305, overlap 107295 107305 TTAATCTTATCGCAA TAAACCAGATC GAAT GGTCTGGTTTA TTCTGCTTTTTTTAA TERM 142 107305 - 107322 + F 82 -7.7 -4.46576 | opp_overlap 107305, overlap 107301 107295 TCTTATCGCAATAAA CCAGATC GAAT GGTCTGG TTTATTCTGCTTTTT TERM 143 108919 - 108909 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 107606 - 109330 + | acetolactate synthase III, large subunit ilvH 109333 - 109824 + | acetolactate synthase III, thiamin-dependent, small subunit TERM 144 109850 - 109870 + F 100 -8.3 -5.75945 | AAACCATAAATTGAG GCCCAATAT CTC GTGTTGGGC TTTTTTTTGCGAAAT TERM 145 109917 - 109907 - f 100 -8.2 -4.91357 | opp_overlap 109906 109902 AAACACAGAATAAAA GCGG TTG CCGC AGTTAATTTTCTGCG fruR 110005 - 111009 + | DNA-binding transcriptional dual regulator TERM 146 111027 - 111050 + F 100 -11.7 -4.11394 | opp_overlap 111025 GTTTTATGAAAATTG GCGCCGGAG AAAAAA CTCTGGCGC TTTTCGGGATAAAAT mraZ 111603 - 112061 + | hypothetical protein TERM 147 112302 - 112330 + G 76 -12.4 -2.52623 | overlap 112301 CCACGGACCTTTCTC CGCGCTGGGCGA ATATG TTGCCGAGCGCG ATCTTATCGGCAAGA TERM 148 112396 - 112407 + G 70 -3.6 -4.61873 | CCGCAACTTGATGAT GCTG AACG CGGC TTTTCCTTTATGCGC mraW 112063 - 113004 + | S-adenosyl-dependent methyltransferase activity on membrane-located substrates TERM 149 113325 - 113312 - g 76 -8.1 -4.18494 | opp_overlap 113311 113309 GATCGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 113001 - 113366 + | membrane bound cell division protein at septum containing leucine zipper motif TERM 150 113429 - 113449 + G 78 -7.6 -4.37734 | opp_overlap 113427 113429 113430, overlap 113430 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 151 114948 - 114969 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 114917, overlap 114951 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 152 114951 - 114966 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 114917, overlap 114948 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 153 115007 - 115025 + G 73 -11.6 -2.67171 | opp_overlap 115004 115001, overlap 115004 115006 115005 115021 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 113382 - 115148 + | transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) TERM 154 116246 - 116236 - g 81 -6.8 -4.62783 | opp_overlap 116236 116238, overlap 116238 GATGCATTGGAAAAA GCCT TGC AGGC TGCACGTCTTCACTG murE 115135 - 116622 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase TERM 155 117059 - 117020 - g 75 -11.4 -3.07443 | opp_overlap 117028, overlap 117029 TTATACGGCAGGCAA TCTCAACAACGACATCGG TGTA CCGATGACGCTGTTGCGC TTAACGCCAGAGTAC TERM 156 117050 - 117029 - g 77 -10.1 -3.6849 | opp_overlap 117028, overlap 117020 AGGCAATCTCAACAA CGACATCGG TGTA CCGATGACG CTGTTGCGCTTAACG murF 116619 - 117977 + | UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase TERM 157 118564 - 118586 + G 74 -9.9 -3.5241 | gap 1, opp_overlap 118546, overlap 118562 GACCGATGGTCTCGA CGGTCTGGCA ATTA TGCC-GACCG TATTTGTCGCCGGTG mraY 117971 - 119053 + | phospho-N-acetylmuramoyl-pentapeptide transferase TERM 158 119093 - 119110 + G 70 -6.2 -4.20783 | ATGTCGTCATTATCG GCCTGG GCCTTA CCGGGC TTTCTTGCGTGGACT TERM 159 119676 - 119653 - g 70 -6.8 -4.07885 | opp_overlap 119643 119652 119646 119653 TATCGTGCGGCAAAA TTGCGCATTT ATGA AAATGCGAAA GTTTGCGTGGTTAAT murD 119056 - 120372 + | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase ftsW 120372 - 121616 + | integral membrane protein involved in stabilizing FstZ ring during cell division TERM 160 121841 - 121826 - g 74 -6 -4.51196 | opp_overlap 121837 GGCAAAGGTATAAAA GCGCTG TTAG CTGCGC CTCTGCGTATTTTTA TERM 161 121837 - 121850 + G 70 -4.5 -4.58395 | opp_overlap 121826 AAAAGCGCTGTTAGC TGCGC CTCT GCGTA TTTTTAACGCCTGGC TERM 162 122230 - 122214 - g 73 -9.4 -3.65782 | TATTAAACCAGACAA TGCCGC TGGTC GCGGCA AAACTTGGCGATACA TERM 163 122424 - 122441 + G 71 -2.5 -4.89393 | overlap 122425 TCAGTGAAATAGCTG CCGCCGG ATTG CCCGCGA TTTTTGTGCCATTTC TERM 164 122645 - 122606 - g 80 -11.4 -3.35015 | gap 1 TTAACTATGGCAGAA CGCGCCCGTGCGGCATCAG TAC CTGATGCCACT-GAGCGGG TTGCAAACGAAGTGA murG 121613 - 122680 + | N-acetylglucosaminyl transferase TERM 165 122662 - 122674 + F 78 -10.5 -3.30783 | opp_overlap 122661 122658, overlap 122659 TGCAAACGAAGTGAG CCGGG CTG CCCGG TCTTAATTGTAGTGA murC 122734 - 124209 + | UDP-N-acetylmuramate:L-alanine ligase ddlB 124202 - 125122 + | D-alanine:D-alanine ligase ftsQ 125124 - 125954 + | membrane anchored protein involved in growth of wall at septum TERM 166 126250 - 126226 - g 72 -10.1 -3.30441 | opp_overlap 126231, overlap 126227 126231 TATCAGCTGCCAGAA TGAAATCGGTA TGG TACCGATTTCC GAAGAAGAAGTGACG TERM 167 126249 - 126227 - g 84 -13.6 -2.5805 | opp_overlap 126231, overlap 126226 126231 ATCAGCTGCCAGAAT GAAATCGGTA TGG TACCGATTTC CGAAGAAGAAGTGAC TERM 168 126245 - 126231 - g 74 -8.6 -3.9941 | opp_overlap 126231, overlap 126227 126226 GCTGCCAGAATGAAA TCGGTA TGG TACCGA TTTCCGAAGAAGAAG ftsA 125951 - 127213 + | ATP-binding cell division protein involved in recruitment of FtsK to Z ring ftsZ 127275 - 128426 + | GTP-binding tubulin-like cell division protein lpxC 128527 - 129444 + | UDP-3-O-acyl N-acetylglucosamine deacetylase TERM 169 129470 - 129513 + F 100 -14.7 -6.38655 | opp_overlap 129469 129468 129470, overlap 129457 TTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGTAAGCCAGTCG TTTTTTTTTGTATTT TERM 170 129513 - 129470 - f 86 -12.5 -2.52946 | opp_overlap 129457 129470, overlap 129469 129468 TTGTCGTATAAAATT CGACTGGTTAACCTGGC ACTCTCTCCG GCCAGGTAAGCCAGTCG TTTTTTTTTGTATTT secM 129625 - 130182 + | regulator of secA translation TERM 171 131001 - 130968 - g 81 -5.9 -4.76213 | overlap 130971 AGAAAGTGAACAAAA TCATCCCGCACCTGA TTCG TCAGGAGAAGGAAGA TTCGGATACGTTCCA TERM 172 131070 - 131048 - g 77 -6.3 -4.72272 | gap 1, opp_overlap 131060 131062, overlap 131062 TCGGTTGATGAAAAA TCGCGCCAGG TAAA CCTGAC-CGA AAGAGGTCTGGTGTT TERM 173 131360 - 131350 - g 77 -6.8 -4.50661 | opp_overlap 131349 131350 AATCCAGAACGAAAA CCAG ACG CTGG CTTCTATCACCTTCC TERM 174 132844 - 132804 - g 72 -8.1 -3.96327 | opp_overlap 132834, overlap 132805 AGCGTTTAGCACAAA TGCAGCAGCTGAGCCATCA GGA TGACGACACTGCTGCAGCT GCGGCACTTGCTGCC TERM 175 132843 - 132805 - g 75 -11.6 -2.97475 | opp_overlap 132834, overlap 132804 GCGTTTAGCACAAAT GCAGCAGCTGAGCCATCA GGA TGACGACACTGCTGCAGC TGCGGCACTTGCTGC secA 130244 - 132949 + | preprotein translocase subunit, ATPase TERM 176 132975 - 132992 + F 100 -12.7 -5.07107 | opp_overlap 132975 ACACATAAGGTAAAA GGCGCAG GATT CTGCGCC TTTTTTACAGGTTTA TERM 177 132992 - 132975 - f 100 -12.7 -4.3487 | opp_overlap 132975 ACACATAAGGTAAAA GGCGCAG GATT CTGCGCC TTTTTTACAGGTTTA TERM 178 133033 - 133021 - g 82 -3.3 -5.243 | TAAAGCATGAAAAAA CTGCA AAT TGCGG TAGGGATAATCCGTA mutT 133012 - 133410 + | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP TERM 179 133443 - 133471 + T 76 -10.9 -2.62396 | opp_overlap 133443 TACATTTACACCAGA TGCCTGATGCGAC GCT GGCGCGTCAGGCC TGGTATCCGACAATG yacG 133700 - 133506 - | hypothetical protein yacF 134453 - 133710 - | hypothetical protein coaE 135073 - 134453 - | dephospho-CoA kinase TERM 180 135650 - 135636 - g 81 -4.3 -5.03314 | CTGATTTCGAAAAAA CCAAA CAAAT TTTGG CGCTTAATCCGGCAT TERM 181 135927 - 135911 - g 81 -12.3 -3.17075 | opp_overlap 135909 135906 TCTGCGGTAATCGAA TGTGCCG ATG CGGCACA CGGTTTGGGCGGTAT TERM 182 136139 - 136127 - g 76 -9.1 -3.72893 | GAGTCTGCCATGAAA CGCCA CGT TGGCG GCGTTGCGGAGTATC guaC 135299 - 136342 + | GMP reductase TERM 183 136351 - 136376 + T 100 -16.2 -3.36671 | opp_overlap 136351 CCTGTAACCACGCAA CGCTGGCGTG CAAACT CACGCCAGCG TTATCCCATTCCACT TERM 184 136376 - 136351 - T 100 -16.2 -3.13164 | opp_overlap 136351 CCTGTAACCACGCAA CGCTGGCGTG CAAACT CACGCCAGCG TTATCCCATTCCACT hofC 137612 - 136377 - | assembly protein in type IV pilin biogenesis, transmembrane protein TERM 185 137049 - 137035 - GT 77 -6.4 -4.68724 | TCAGGCAACACAAAA TGCAGC ATT GCTACA ACCACAACAATAGCC TERM 186 137113 - 137129 + gT 72 -4.4 -4.72272 | gap 1, overlap 137115 TTTTTCACTTTCTCT GC-CAGC AAAT GCTGTGC TTTTTGCTGGCGGGC hofB 138954 - 137569 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 187 137951 - 137963 + gr 83 -9.1 -4.15044 | opp_overlap 137947 137944 GAAGACAACATCCAG TGGGC TAC GCCCA TTTGTTGCAACCGCA TERM 188 138210 - 138233 + gr 76 -9.6 -3.43919 | overlap 138208 CAACAGGATCTTCCA CGCTACAGAG ATTG CTTTGTGGCG TATTTCGCGTTTGCA ppdD 139401 - 138964 - | putative major pilin subunit TERM 189 139595 - 139564 - R 81 -11.6 -2.73797 | overlap 139561 AGGGAGAGAAATTTA TGACGGGCAGGACA ATGT TATCCCGCCCGTTA AGGCATCTTCAGGAA nadC 140508 - 139615 - | quinolinate phosphoribosyltransferase TERM 190 140322 - 140310 - G 77 -3.3 -5.0538 | GTTTACCGCAAAAAA CGCCA TTT TCGCG GGTGATAACAGTGGC TERM 191 141114 - 141083 - g 70 -5.7 -4.3208 | opp_overlap 141083, overlap 141076 CTCCAGAACGTAAAA CCGACCCCGGTCA GGCATT TGACTGGGCACGG TTTCGCGCTCTGGTG ampD 140596 - 141147 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 141144 - 141998 + | conserved hypothetical protein; putative inner membrane protein TERM 192 142029 - 142005 - T 90 -11.4 -3.64703 | overlap 142006 CTGGTCTGAGTTAAA TGCCCTCACC GGGGA GGTGAGGGCG AAATGAAATTAGTGT TERM 193 142028 - 142006 - T 100 -14.9 -2.78679 | overlap 142005 TGGTCTGAGTTAAAT GCCCTCACC GGGGA GGTGAGGGC GAAATGAAATTAGTG aroP 143411 - 142038 - | aromatic amino acid transporter TERM 194 142377 - 142424 + g 72 -8.7 -3.85698 | gap 3, opp_overlap 142377 AATCAGTACGCACAA CGCCGT-TACCAGTGCAGACACCA GAA TGGTGT-TG-ACTGGTACGCCGCG TTTATCGACAGACGC TERM 195 142422 - 142377 - G 72 -10 -3.3854 | gap 3, opp_overlap 142377 AATCAGTACGCACAA CGCCGTTACCAGTGCAGACACCA GAA TGGTGT-TG-ACTGGT-ACGCCG CGTTTATCGACAGAC pdhR 144001 - 144765 + | DNA-binding transcriptional dual regulator EFER_0134 144944 - 144762 - | hypothetical protein TERM 196 144889 - 144835 - Gf 70 -7.3 -3.90291 | gap 1, opp_overlap 144856, overlap 144836 144839 144842 AGCGCGGCAACTAAA CGTAGAACCTGTCTTATTGAGCTTTC CGGT GAGAGTTCAATGGGACAGGTTCCA-G AAAACTCAACGTTAT TERM 197 144886 - 144839 - Gf 80 -11.4 -2.70979 | opp_overlap 144856, overlap 144835 144836 144842 CGGCAACTAAACGTA GAACCTGTCTTATTGAGCTTTC CGGT GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 198 145145 - 145133 - gH 80 -9.1 -3.9461 | opp_overlap 145132 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG TERM 199 147041 - 147017 - gH 70 -9.9 -2.50479 | overlap 147016 147013 147021 CTGAACGAAAACTAC CACATGCCGGC AAT GCCGGAAGGTG CTGAGGAAGGTATCC aceE 144926 - 147589 + | pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding TERM 200 147917 - 147883 - g 86 -9 -4.33203 | overlap 147880 GAAGAGAAGAAAGAA GCCGCTCCGGCAGCAG CAC CCGCGGCTGCGGCGGC AAAAGACGTAAATGT aceF 147604 - 149496 + | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 TERM 201 149524 - 149503 - f 100 -11.5 -4.43477 | opp_overlap 149505, overlap 149505 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 202 149505 - 149522 + F 100 -14.1 -5.32882 | opp_overlap 149503 149505 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 203 149522 - 149505 - f 100 -14.1 -3.82321 | opp_overlap 149505, overlap 149503 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 204 150490 - 150472 - g 74 -2.2 -5.16572 | overlap 150476 ATGGAAGGTAAAAAA GCACCGGC TGA ACCGCAGC GTTACGACGCCGTAC TERM 205 150568 - 150540 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCAGGCGTGGAAG TGGACGACCGTGGTT lpd 149704 - 151128 + | lipoamide dehydrogenase, E3 component is part of three enzyme complexes TERM 206 151180 - 151164 - T 89 -6.5 -5.26875 | opp_overlap 151164 CCGGTAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGT TERM 207 151164 - 151180 + T 91 -6.5 -5.51402 | opp_overlap 151164 CCGGTAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGT yacH 153055 - 151199 - | hypothetical protein TERM 208 151433 - 151416 - G 70 -7 -4.07687 | opp_overlap 151428 ACTTTCTCCCGAAAA GCCTGA CGCTGC TCAGGC GAGGCCGATTGAATA TERM 209 153528 - 153517 - g 77 -7.2 -4.57837 | overlap 153518 153519 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT TERM 210 155608 - 155594 - g 72 -7.8 -3.87815 | CTGGATGCGCATAAA GGTCAG CTA CCGACC CGCCTGTGGGTGGCA acnB 153410 - 156007 + | bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase TERM 211 156062 - 156095 + F 100 -11.2 -5.2204 | opp_overlap 156066 CAAGCAACACTTCTT TAAACCCCCTTTTT GCTCAA GGAAAGGGGGTTTA TTTTTATTCCTTATC yacL 156204 - 156566 + | hypothetical protein TERM 212 156571 - 156600 + T 93 -13.6 -2.71364 | opp_overlap 156572, overlap 156573 AGCAGAAGTAGATTA ATCAGGCGGAGC CTCTGT GCTCCGCCTGAG TCGTTAAACAGCTGG TERM 213 156599 - 156572 - T 100 -17.1 -3.34104 | opp_overlap 156571 156573 GCAGAAGTAGATTAA TCAGGCGGAGC CTCTGT GCTCCGCCTGA GTCGTTAAACAGCTG speD 157398 - 156604 - | S-adenosylmethionine decarboxylase speE 158280 - 157414 - | spermidine synthase (putrescine aminopropyltransferase) TERM 214 158362 - 158337 - RH 78 -10.5 -3.24255 | opp_overlap 158337 158339, overlap 158330 158339 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 215 158339 - 158360 + rH 73 -8.7 -3.51934 | opp_overlap 158339 158337 158330, overlap 158337 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG TERM 216 158360 - 158339 - RH 79 -10.9 -3.17362 | opp_overlap 158337 158339, overlap 158337 158330 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 158904 - 158386 - | hypothetical protein TERM 217 158853 - 158863 + gH 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 218 160284 - 160272 - gR 70 -5.5 -4.3739 | overlap 160279 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGGCTCATCGCGCA cueO 158899 - 160449 + | multicopper oxidase (laccase) TERM 219 160491 - 160468 - TR 84 -11 -3.57462 | opp_overlap 160465 160470, overlap 160470 GACCGTATTTGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTATTTCACAT TERM 220 160489 - 160470 - TR 100 -13.6 -3.36515 | opp_overlap 160465 160470, overlap 160468 CCGTATTTGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC TERM 221 160470 - 160489 + Tr 100 -13.6 -3.65135 | opp_overlap 160470 160468, overlap 160465 CCGTATTTGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC gcd 162886 - 160496 - | glucose dehydrogenase TERM 222 160982 - 160996 + g 76 -7.8 -4.28656 | overlap 160968 GCCGGATTCCGTACC GGTGCC TTT GGCATC TTTTGGCTGTTCCAT TERM 223 162194 - 162183 - G 72 -5.8 -4.44046 | TCGAGCGCAAACAAA CGCT GGTG AGCG GTACACAGGTAAAGC hpt 163092 - 163628 + | hypoxanthine phosphoribosyltransferase TERM 224 163633 - 163665 + T 82 -3.3 -5.4182 | overlap 163635 163636 163638 TGGACGAGTAAGTGC GGATGTGCCGGATGT GTT GCATCCGGCATGGTG TTTTTATTTGTGGTT TERM 225 163635 - 163663 + T 79 -8.1 -4.31946 | overlap 163633 163636 163638 GACGAGTAAGTGCGG ATGTGCCGGATGT GTT GCATCCGGCATGG TGTTTTTATTTGTGG TERM 226 163636 - 163662 + T 84 -11.6 -3.17541 | overlap 163635 163633 163638 ACGAGTAAGTGCGGA TGTGCCGGATGT GTT GCATCCGGCATG GTGTTTTTATTTGTG TERM 227 163638 - 163660 + T 100 -14.2 -3.11568 | overlap 163636 163635 163633 GAGTAAGTGCGGATG TGCCGGATGT GTT GCATCCGGCA TGGTGTTTTTATTTG can 164331 - 163669 - | carbonic anhydrase yadG 164440 - 165366 + | putative transporter subunit: ATP-binding component of ABC superfamily TERM 228 165454 - 165471 + G 76 -4.1 -4.94168 | overlap 165455 AGACGCTGGTGCCAC CGGTCAT CACC ATGACCC TTTATTTTATTATCT yadH 165363 - 166133 + | putative transporter subunit: membrane component of ABC superfamily TERM 229 166140 - 166169 + F 100 -12.9 -4.10657 | overlap 166141 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT CGGGGGAGAGGAG TTTTGAAGGCTATCA TERM 230 166141 - 166168 + F 100 -14.2 -3.06073 | overlap 166140 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT CGGGGGAGAGGA GTTTTGAAGGCTATC yadI 166238 - 166678 + | putative PTS Enzyme IIA yadE 166735 - 167961 + | putative exported polysaccharide deacetylase panD 168345 - 167965 - | aspartate 1-decarboxylase TERM 231 168392 - 168378 - H 86 -11.4 -3.33696 | opp_overlap 168378 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 232 168378 - 168392 + H 89 -11.4 -3.56099 | opp_overlap 168378 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC yadD 168619 - 169551 + | putative transposase TERM 233 169912 - 169882 - T 89 -12 -3.3482 | opp_overlap 169885, overlap 169885 TAACGTGGCAATGAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AATATTACGCCAGTT TERM 234 169909 - 169885 - T 81 -9.3 -3.81146 | opp_overlap 169885, overlap 169882 CGTGGCAATGAATAA CTGGCGCCA TCAGCCG TAGCGCCAG TTAAATATTACGCCA panC 170768 - 169917 - | pantothenate synthetase panB 171574 - 170780 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 235 171648 - 171680 + r 100 -15.7 -2.62616 | GCAATGATTTCTCTG TTGTTGCACCGCC ATTATCA GGCGGTGCAACGA TGCTATCAGGGGTAG yadC 172972 - 171686 - | putative fimbrial-like adhesin exported protein TERM 236 172070 - 172082 + g 100 -3.3 -5.80003 | opp_overlap 172070 AATATCAAAAGGAAC TGGGG TTG CACCA TTTTTTATTTGTTGG EFER_0158 173593 - 172997 - | putative fimbrial-like adhesin protein yadL 174233 - 173619 - | putative fimbrial-like adhesin protein TERM 237 173659 - 173683 + g 71 -2.7 -4.84918 | opp_overlap 173659 173660, overlap 173660 GCTGGTGCAGAAAAT GTGCCAGCGGT AAC GTCGCTGACAG TTTTATCTTTATCAA TERM 238 173749 - 173765 + g 70 -5.1 -4.42806 | TTATTACCTGTGGCG GAGGCAA TAA TTACCTC TTTATTTGCCGGTGC yadM 174814 - 174239 - | putative fimbrial-like adhesin exported protein htrE 177427 - 174830 - | outer membrane usher protein TERM 239 175688 - 175729 + g 89 -13.3 -3.33696 | gap 1, opp_overlap 175698 175702, overlap 175690 175698 GAGTTTTTCAATTGG AATGGTGAAACTGA-GATAG ATA CTATCATCGGTTTCACCATC TTCATTCCAGGAACG TERM 240 175690 - 175727 + g 100 -15.9 -3.23853 | gap 1, opp_overlap 175698 175702, overlap 175688 175698 GTTTTTCAATTGGAA TGGTGAAACTGA-GATAG ATA CTATCATCGGTTTCACCA TCTTCATTCCAGGAA TERM 241 176101 - 176115 + g 70 -4.2 -4.66537 | overlap 176102 ACGATAAACGATAGC TCTGCC CCT GGTAGG TTTTATCTTCAGGGA TERM 242 176529 - 176539 + g 70 -5.4 -4.31688 | TTATAACCGCTCTGA GTGA TAG TCAC TTTTGCGTTAGTGTT ecpD 178203 - 177463 - | periplasmic pilin chaperone TERM 243 178265 - 178231 - R 84 -3.7 -5.50499 | gap 1, opp_overlap 178231 178229 178227 GCAGAGTTAAAAAAA CAGGGAGTAGTA-TGA AATA TCAATATTATTCCCTG TATGTATTCAATTCA yadN 178884 - 178300 - | putative fimbrial-like adhesin exported protein TERM 244 179252 - 179265 + r 84 -5.3 -5.36441 | AATTACCATTTGTCA GGTTT AGTA AAACC TTTTTTATGTAAGAG folK 179718 - 179239 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 181133 - 179715 - | poly(A) polymerase I TERM 245 180496 - 180476 - G 73 -11.9 -2.74605 | opp_overlap 180474, overlap 180473 180490 TCGCGGCAAAACGCA CGGCACGTA GCA TACGTACCG GATCTTCACGGTAGC yadB 182080 - 181172 - | glutamyl-Q tRNA(Asp) synthetase TERM 246 181998 - 181983 - G 81 -6.8 -4.64676 | overlap 181984 CGAGCCTGAAGAAAA CTGCCG AGCG CGGCAA TCAGAGAACCAAAAT TERM 247 182109 - 182085 - R 90 -5.6 -5.4505 | opp_overlap 182088, overlap 182088 TCTTTGAACAAAAAA TAAGGCGGGA GTAAT TCCCGCCTGT GGTAAACGTGATGAA TERM 248 182088 - 182106 + r 89 -12.4 -2.79302 | opp_overlap 182085 182088 TTGAACAAAAAATAA GGCGGGAG TAA TTCCCGCC TGTGGTAAACGTGAT TERM 249 182106 - 182088 - R 100 -11.7 -4.81306 | opp_overlap 182088, overlap 182085 TTGAACAAAAAATAA GGCGGGA GTAAT TCCCGCC TGTGGTAAACGTGAT dksA 182589 - 182134 - | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein sfsA 183472 - 182768 - | putative regulator ligT 184242 - 183487 - | 2'-5' RNA ligase TERM 250 184663 - 184674 + GH 70 -5.8 -4.25283 | TTATTTATCGCTGCC CGCT CATC AGCG TTTTGATGAAGCCGT TERM 251 184704 - 184685 - gH 72 -9.2 -3.14344 | opp_overlap 184685 184681 CAGCGTTTTGATGAA GCCGTGGC GGTT GCCACCGC TGAATTGCTGCGTCA hrpB 184091 - 186520 + | ATP-dependent (RNA) helicase mrcB 186614 - 189148 + | fused glycosyl transferase ; transpeptidase TERM 252 189188 - 189166 - f 100 -19.2 -2.89742 | TCTAAGCGTGACATA CCGGATGGCG AGT CGCCATCCGG TAAAATAACATCCTA TERM 253 189273 - 189292 + F 78 -9.2 -3.68662 | GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT TERM 254 190101 - 190087 - g 76 -4.2 -4.98436 | opp_overlap 190087, overlap 190079 190089 CGAACAGCAGAAAAA CTCTGA ATC TCAGCG TTATACCATTGCTCC fhuA 189368 - 191557 + | ferrichrome outer membrane transporter TERM 255 191568 - 191589 + F 90 -11.5 -3.5774 | overlap 191569 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCG TTTCACAAGTTGGCT TERM 256 191569 - 191588 + F 100 -15 -2.74322 | overlap 191568 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC GTTTCACAAGTTGGC fhuC 191608 - 192405 + | iron-hydroxamate transporter subunit ; ATP-binding component of ABC superfamily TERM 257 192428 - 192456 + G 88 -11 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGTCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 192405 - 193295 + | iron-hydroxamate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 258 193434 - 193448 + G 72 -4.3 -4.66163 | opp_overlap 193428 CGCCAGATATCGATG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 193292 - 195274 + | fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components TERM 259 195302 - 195280 - T 100 -19.2 -4.63932 | opp_overlap 195277 GAGCCGTTAATAAAA TGCCTCGCCC GGT GGGCGAGGCA AAATCATTACAACTT hemL 196589 - 195309 - | glutamate-1-semialdehyde aminotransferase (aminomutase) TERM 260 195458 - 195448 - G 72 -6.8 -4.23615 | ATCATATGGAAGAAA CGCT TAA AGCG CTCGACGTCGCAGGC clcA 196814 - 198235 + | chloride channel, voltage-gated TERM 261 198523 - 198509 - g 75 -5.6 -4.68994 | opp_overlap 198509 ATGACCATCGAAAAA CAGGGC GTA GGCCTG GTGGTTGACCCGATG yadR 198317 - 198661 + | putative chaperone involved in Fe-S cluster assembly and activation; hesB-like TERM 262 198683 - 198710 + T 100 -11.4 -4.56914 | CACGATTCTTTCTTA TGGCCCACAA TGTGTTAT TTGTGGGCCA TTTTCGTTTAACTAC EFER_0180 199351 - 198722 - | putative inner membrane protein TERM 263 199154 - 199127 - G 72 -7 -4.15832 | ACGAACCAGAAATAA CGTCACCATGCT GGTT ACCATAGCGACG ACCAAATCGGTGGGA btuF 200214 - 199387 - | vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily TERM 264 200170 - 200152 - GR 100 -11.7 -3.99374 | TGGCAGCAAGAAGAA CAGGGCG GCGAG CGCCCTG AATGATAGATTAGCC pfs 200878 - 200180 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 265 201997 - 202012 + G 78 -5.4 -4.76123 | gap 1, opp_overlap 201990, overlap 201990 TAAATAAACTGGTGC CGCATGC GGC GCA-GCG TTTTATTGATAATTT dgt 200961 - 202478 + | deoxyguanosine triphosphate triphosphohydrolase TERM 266 203870 - 203860 - g 78 -8.2 -4.24123 | overlap 203861 TGAACAACGTGAAAA CGGG CAC CCCG GCTGCGCAGATCGGC degP 202608 - 204032 + | serine endoprotease (protease Do), membrane-associated TERM 267 204038 - 204072 + F 71 -4.9 -4.5954 | opp_overlap 204060 204061, overlap 204043 GATGCAGTAATCCTC CACAGCCCCTTCCTG AAAAA CAGGAAGGGGTTCCC TTTTATATAATGTGA TERM 268 204043 - 204067 + F 100 -15.8 -3.43774 | opp_overlap 204060 204061, overlap 204038 AGTAATCCTCCACAG CCCCTTCCTG AAAAA CAGGAAGGGG TTCCCTTTTATATAA cdaR 204190 - 205347 + | DNA-binding transcriptional activator yaeH 205848 - 205462 - | hypothetical protein TERM 269 205720 - 205734 + g 75 -7.1 -4.40003 | AAACTTCACACTCTT GGCGA AAAAC TCGCC TTTATCTTTCTGGAA yaeI 206821 - 206006 - | putative metallophosphoesterase TERM 270 206535 - 206519 - G 72 -8.7 -3.75169 | overlap 206509 GAGTACGTCAGCAAA CGCCGAA AAA TTCAGCG GCATATCGAATAATA TERM 271 206861 - 206839 - R 100 -10.5 -5.40474 | opp_overlap 206840, overlap 206840 ATCCCTGTAAAAAAA TCGGGCAGC GTCGT GCTGCCCGT GTACTGACTTTTAGT TERM 272 206860 - 206840 - R 100 -14 -3.83561 | opp_overlap 206840, overlap 206839 TCCCTGTAAAAAAAT CGGGCAGC GTCGT GCTGCCCG TGTACTGACTTTTAG TERM 273 206840 - 206860 + r 100 -14.7 -2.8619 | opp_overlap 206840 206839 TCCCTGTAAAAAAAT CGGGCAGCG TCG TGCTGCCCG TGTACTGACTTTTAG dapD 207696 - 206872 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 210399 - 207727 - | uridylyltransferase TERM 274 210435 - 210458 + r 79 -6.6 -4.73613 | opp_overlap 210439, overlap 210439 AAATTATCGCATTAA AAAAGCCGGC ATTC GCCGGCTTCA TTTTATTCGTCGTGC TERM 275 210439 - 210454 + r 100 -11.8 -3.83868 | opp_overlap 210439, overlap 210435 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC TERM 276 210454 - 210439 - R 100 -11.8 -5.15634 | opp_overlap 210435 210439 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC map 211255 - 210461 - | methionine aminopeptidase TERM 277 211205 - 211215 + g 74 -2.4 -5.15381 | overlap 211194 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 278 212033 - 212022 - g 72 -7.2 -4.24413 | overlap 212019 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 211623 - 212348 + | 30S ribosomal subunit protein S2 TERM 279 212341 - 212329 - f 76 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCAC TERM 280 212400 - 212420 + F 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 281 212655 - 212639 - g 77 -3 -5.13521 | gap 1, overlap 212640 212643 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 212483 - 213334 + | protein chain elongation factor EF-Ts TERM 282 213345 - 213366 + F 100 -13.7 -4.57837 | opp_overlap 213345 213348, overlap 213357 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGCGCCCATCT TERM 283 213366 - 213345 - f 100 -11.5 -4.23892 | opp_overlap 213345 213357, overlap 213348 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGCGCCCATCT TERM 284 213363 - 213348 - f 86 -11.8 -3.12324 | opp_overlap 213345 213357, overlap 213345 AATTATCGAAAAGGA GCCGCC TGAG GGCGGC TTCTTTTTGCGCCCA pyrH 213481 - 214206 + | uridylate kinase TERM 285 214224 - 214268 + F 80 -11.5 -2.57501 | opp_overlap 214227, overlap 214223 214221 214220 214226 CCCGTGATGGATAAA TAAGGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCCGTA ATATGTTTAATCAGG TERM 286 214226 - 214266 + F 72 -9.7 -2.82279 | opp_overlap 214227, overlap 214224 214223 214221 214220 CGTGATGGATAAATA AGGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCCG TAATATGTTTAATCA TERM 287 214265 - 214227 - f 93 -11 -4.09117 | opp_overlap 214226 214224 214223 214221 214220 GTGATGGATAAATAA GGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCC GTAATATGTTTAATC frr 214356 - 214913 + | ribosome recycling factor TERM 288 214893 - 214913 + F 79 -8.3 -4.15044 | opp_overlap 214893 214894 214896, overlap 214894 214896 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 289 214913 - 214893 - f 79 -8.3 -4.14627 | opp_overlap 214893 214894 214896, overlap 214894 214896 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 290 214912 - 214894 - f 86 -11.8 -3.08294 | opp_overlap 214893 214894 214896, overlap 214893 214896 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 291 214894 - 214912 + F 86 -11.8 -3.08812 | opp_overlap 214894 214893 214896, overlap 214893 214896 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 292 214927 - 214975 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 214933, overlap 214928 214933 GATTTCTTGAACGAC AAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 293 214928 - 214974 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 214933, overlap 214927 214933 ATTTCTTGAACGACA AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 294 214969 - 214933 - f 100 -13 -5.37345 | gap 1, opp_overlap 214933 214928 214927 TTGAACGACAAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 295 214933 - 214969 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 214933, overlap 214928 214927 TTGAACGACAAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC dxr 215006 - 216202 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 296 216307 - 216324 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG ispU 216388 - 217149 + | undecaprenyl pyrophosphate synthase TERM 297 217713 - 217736 + G 70 -3.8 -4.71828 | gap 1, overlap 217722 GCTGGCCCCGAAGGT CTCT-CCCGGT AAA ACCTGGCAGGG TTTTATTGGTGGACT cdsA 217162 - 218019 + | CDP-diglyceride synthase TERM 298 218131 - 218147 + G 72 -6.5 -4.30448 | TTGCCCGGCGTTGTG GTGTTCG CGT CGAGCGC TTTTCCATTGGCTTT yaeL 218031 - 219383 + | zinc metallopeptidase yaeT 219415 - 221823 + | outer membrane protein assembly factor TERM 299 221924 - 221907 - f 74 -7.7 -3.96483 | overlap 221908 AGGCCACGCAAAGAA CTGCACC TTCG GGTGCAA ATGGGATGGTAAGGA TERM 300 222409 - 222381 - g 80 -11.8 -3.28712 | overlap 222367 222366 222397 CGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 221947 - 222432 + | periplasmic chaperone TERM 301 222514 - 222489 - g 82 -13.3 -2.97245 | opp_overlap 222487, overlap 222484 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 222436 - 223461 + | UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase TERM 302 223488 - 223525 + F 100 -12.7 -4.07515 | overlap 223490 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 303 223490 - 223523 + F 100 -13.1 -3.60967 | overlap 223488 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 223566 - 224021 + | (3R)-hydroxymyristol acyl carrier protein dehydratase lpxA 224025 - 224813 + | UDP-N-acetylglucosamine acetyltransferase TERM 304 224847 - 224868 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG lpxB 224813 - 225961 + | tetraacyldisaccharide-1-P synthase TERM 305 226125 - 226114 - g 81 -7.2 -4.67011 | opp_overlap 226113 AAGCTGAGCGAAAAA CGCC GTCT GGCG CTCTGTGAAGAGATC rnhB 225958 - 226554 + | ribonuclease HII, degrades RNA of DNA-RNA hybrids TERM 306 227919 - 227908 - g 70 -7.2 -4.08945 | ACGATGGCGGCAAAA GCGG TGAT CCGC GACGTAGGCCGCGTG dnaE 226591 - 230073 + | DNA polymerase III alpha subunit TERM 307 230239 - 230225 - g 74 -2.8 -5.00616 | GTCTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 230086 - 231045 + | acetyl-CoA carboxylase, carboxytransferase, alpha subunit TERM 308 231065 - 231082 + F 100 -9.1 -5.252 | opp_overlap 231065 CAAATGTTCTGAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCATG TERM 309 231082 - 231065 - f 71 -6.9 -4.10453 | opp_overlap 231065 CAAATGTTCTGAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCATG TERM 310 231634 - 231624 - g 70 -4.6 -4.46212 | CCGCGTATCAGAAAA GCCC GGT AGGC TGTCTGTTTTATGAT TERM 311 231950 - 231932 - g 70 -6.7 -4.07568 | CCGGTCTGGCTAAAA CCAACAC GTAAT GCGTTGG GGATTTTGGGCGGGA ldcC 231143 - 233284 + | lysine decarboxylase 2, constitutive yaeR 233341 - 233730 + | putative S-C lyase TERM 312 233750 - 233770 + F 100 -13.3 -3.24925 | opp_overlap 233731 TGTCATCGCGGCATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT TERM 313 234027 - 233994 - g 74 -10.9 -3.22475 | opp_overlap 234001, overlap 233992 TGCATTGCGAGAACA TCTGCCACCAGTGGC ATGT GCCGCTGGTGGTTGA GCGTGTGCAACTTGC TERM 314 234001 - 234020 + G 73 -11.4 -2.72991 | opp_overlap 233994 233992 CGAGAACATCTGCCA CCAGTGGC ATGT GCCGCTGG TGGTTGAGCGTGTGC tilS 233795 - 235093 + | tRNA(Ile)-lysidine synthetase TERM 315 235132 - 235100 - T 100 -14.9 -3.76952 | overlap 235120 CTTAGTTAAGTGAAA GCCGGATAAGACGCT TCA AACGTCGCATCCGGC GAAAGTCAATCAGGA rof 235396 - 235142 - | modulator of Rho-dependent transcription termination yaeP 235589 - 235389 - | hypothetical protein TERM 316 235426 - 235439 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 317 236050 - 236037 - g 76 -8.1 -4.24342 | opp_overlap 236046 CGGCGGATTAAGAAA GCCTG CACC CAGGC CGCAGAAGTGGCGCT yaeQ 235755 - 236300 + | hypothetical protein yaeJ 236297 - 236719 + | hypothetical protein nlpE 236733 - 237443 + | lipoprotein involved with copper homeostasis and adhesion TERM 318 237545 - 237572 + T 84 -9.8 -3.79419 | overlap 237543 237546 GCACGATTTTGTAGG TCGGGTAAGGCG CTCA CGCCTCATCCGG TATTTTGTGGACGAG TERM 319 237546 - 237571 + T 77 -11.1 -2.8733 | overlap 237545 237543 CACGATTTTGTAGGT CGGGTAAGGCG CTCA CGCCTCATCCG GTATTTTGTGGACGA yaeF 238423 - 237599 - | putative lipoprotein TERM 320 238466 - 238446 - R 100 -15.5 -5.10497 | opp_overlap 238446 AATCCATGTAAAAAA GGGTCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC TERM 321 238446 - 238466 + r 100 -15.5 -3.89346 | opp_overlap 238446 AATCCATGTAAAAAA GGGTCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 240194 - 238476 - | prolyl-tRNA synthetase yaeB 241012 - 240305 - | hypothetical protein TERM 322 240859 - 240884 + g 83 -12.6 -3.28924 | gap 1, opp_overlap 240855 240854 AATGGCTAAACGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGGAGCAATG TERM 323 240909 - 240921 + g 70 -4.7 -4.57073 | overlap 240910 GCAATGAGATGCAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 241413 - 241009 - | conserved hypothetical protein; putative outer membrane protein, signal TERM 324 241498 - 241470 - R 75 -6 -4.58663 | gap 1, opp_overlap 241471, overlap 241473 241476 AGGAGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 325 241496 - 241473 - R 100 -14.6 -3.23975 | opp_overlap 241471, overlap 241470 241476 AGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 326 241493 - 241476 - R 100 -12.7 -3.75505 | opp_overlap 241471, overlap 241473 241470 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 242346 - 241531 - | DL-methionine transporter subunit ; periplasmic-binding component of ABC superfamily metI 243039 - 242386 - | DL-methionine transporter subunit ; membrane component protein of ABC superfamily metN 244063 - 243032 - | DL-methionine transporter subunit ; ATP-binding component of ABC superfamily TERM 327 243353 - 243363 + g 77 -8.2 -4.13767 | overlap 243361 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA gmhB 244251 - 244823 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 328 244977 - 244963 - f 85 -4.2 -5.47159 | opp_overlap 244963, overlap 244964 244971 GTTGAAGAGAAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 329 244976 - 244964 - f 72 -7.7 -3.87211 | opp_overlap 244963, overlap 244963 244971 TTGAAGAGAAAAAAT CCTGA AAT TCAGG GTTGACTCTGAAAGA TERM 330 245009 - 244997 - f 74 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 331 247056 - 247019 - f 100 -6.3 -5.68438 | opp_overlap 247021 247036, overlap 247021 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 332 247054 - 247021 - f 93 -8.9 -4.47052 | opp_overlap 247021 247036, overlap 247019 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 333 247021 - 247054 + F 76 -6.7 -4.49756 | opp_overlap 247021 247019, overlap 247036 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 334 250168 - 250142 - f 71 -9.5 -2.90797 | overlap 250137 TTGATACAGATGACA TCGACAGGTCA GAACA TGACGTGTCGA TAAACAGAATTTGCC TERM 335 250441 - 250460 + F 100 -10 -5.92337 | opp_overlap 250440 250441 CCACTTATTAAGAAG CCTCGAGT TAAT GCTCGAGG TTTTTTTTCGTCTAT TERM 336 250460 - 250441 - f 70 -9.3 -2.83867 | opp_overlap 250441, overlap 250440 CCACTTATTAAGAAG CCTCGAG TTAATG CTCGAGG TTTTTTTTCGTCTAT TERM 337 250496 - 250512 + F 79 -8 -4.24338 | opp_overlap 250495 250496, overlap 250510 TATTGTTGCCATAAT CGCAGA AATCC TCTGCG TTTTACGCTCTTTTT TERM 338 251355 - 251326 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTAAGCCCGGAA dkgB 250591 - 251394 + | 2,5-diketo-D-gluconate reductase B TERM 339 251405 - 251422 + T 100 -11.3 -4.68593 | opp_overlap 251407 ATTAAGCCTCTCTAA CAGCTCC TTTG GGAGCTG TTTTTACATGCTCGC yafC 252305 - 251391 - | putative DNA-binding transcriptional regulator TERM 340 252516 - 252497 - H 89 -11.4 -3.54771 | opp_overlap 252481, overlap 252480 CCTATAACAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTAATAGAGG TERM 341 252612 - 252588 - g 72 -9.9 -3.28924 | opp_overlap 252587 252583 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 342 253211 - 253234 + G 82 -3.1 -5.18371 | overlap 253205 253206 253209 253211 CGATGATCAGCGCCG TCGGGCG TTTGGTCGCC CGCTCGA TTTTGTTTTCTACCG yafD 252546 - 253346 + | hypothetical protein TERM 343 253367 - 253392 + F 87 -8.3 -4.46212 | gap 1, opp_overlap 253351 253378, overlap 253352 253351 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGCCC TTTTATACTCAAACA yafE 253424 - 254194 + | putative S-adenosyl-L-methionine-dependent methyltransferase TERM 344 254223 - 254203 - T 100 -9.7 -5.72622 | opp_overlap 254203 GGCATAAATAAAAAA GGCACCG GGGGAAT CGGTGCC TTTTTATTATCTGGT TERM 345 254203 - 254223 + T 100 -10.4 -5.25699 | opp_overlap 254203 GGCATAAATAAAAAA GGCACCGG GGGAA TCGGTGCC TTTTTATTATCTGGT mltD 255600 - 254242 - | membrane-bound lytic murein transglycosylase D TERM 346 254950 - 254970 + g 70 -4.6 -4.46669 | opp_overlap 254950 TGGTAATGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 256427 - 255672 - | putative hydroxyacylglutathione hydrolase TERM 347 256053 - 256041 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAAATAAGGT yafS 256461 - 257183 + | putative S-adenosyl-L-methionine-dependent methyltransferase rnhA 257647 - 257180 - | ribonuclease HI, degrades RNA of DNA-RNA hybrids dnaQ 257712 - 258443 + | DNA polymerase III epsilon subunit TERM 348 258659 - 258692 + T 100 -13.3 -2.9732 | opp_overlap 258664, overlap 258664 GTTCCGCCAATATTC AGAAAGCCTGAGTCA GTAA TGATTCAGGCTTTCG TCGTTTAAGTTCCAG TERM 349 258687 - 258664 - T 83 -9.6 -3.9777 | opp_overlap 258659 258664 GCCAATATTCAGAAA GCCTGAGTCA GTAA TGATTCAGGC TTTCGTCGTTTAAGT TERM 350 258664 - 258687 + T 100 -11.8 -3.89412 | opp_overlap 258664, overlap 258659 GCCAATATTCAGAAA GCCTGAGTCA GTAA TGATTCAGGC TTTCGTCGTTTAAGT TERM 351 258740 - 258715 - T 100 -6.9 -5.61596 | overlap 258717 AGTTCCAGAAAAAAA TAGCCACGAAA CTTA TCTCGTAGCCA TATTTACCCCCTAAC TERM 352 258738 - 258717 - T 78 -7.3 -4.45201 | overlap 258715 TTCCAGAAAAAAATA GCCACGAAA CTTA TCTCGTAGC CATATTTACCCCCTA yafV 259521 - 258751 - | putative C-N hydrolase family amidase ivy 259675 - 260148 + | inhibitor of vertebrate C-lysozyme TERM 353 260165 - 260182 + T 100 -12.7 -3.73068 | opp_overlap 260165 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG TERM 354 260182 - 260165 - T 100 -12.7 -4.56367 | opp_overlap 260165 TAGCGGATAAAGAAA CGGAGCC TTTC GGCTCCG TTATTCAATTACGCG fadE 262635 - 260191 - | acyl coenzyme A dehydrogenase TERM 355 261881 - 261867 - G 82 -11.4 -3.524 | CACCCATGCAGACAA TCCCGG TAT CCGGGA TAGCGCCCGCATCGG TERM 356 262284 - 262303 + g 70 -4.2 -4.62069 | overlap 262268 CGGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 357 263112 - 263093 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 263093 263094, overlap 263094 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCTATTTCTGACG lpcA 262875 - 263453 + | D-sedoheptulose 7-phosphate isomerase TERM 358 263464 - 263495 + F 84 -10 -3.90318 | opp_overlap 263455, overlap 263465 263474 263475 AGTAAGTCTGGCGTA GGCCGGATAGGGCG TTTA CGCCGCATCCGGCA TTTGTGCACTGATGC TERM 359 263465 - 263494 + F 100 -13.5 -2.93869 | opp_overlap 263455, overlap 263464 263474 263475 GTAAGTCTGGCGTAG GCCGGATAGGGCG TTTA CGCCGCATCCGGC ATTTGTGCACTGATG TERM 360 264385 - 264364 - g 74 -8.7 -3.91084 | opp_overlap 264379 TGACGGGCAATGAAA CCTGGCAAA AGAT TATGCCAGG CGAATGGCGCTTATT yafJ 263658 - 264425 + | putative glutamine amidotransferases class-II yafK 265136 - 264396 - | hypothetical protein yafL 265428 - 266186 + | putative exported hydrolase argA 267580 - 266249 - | fused acetylglutamate kinase homolog (inactive) ; amino acid N-acetyltransferase TERM 361 266291 - 266303 + g 77 -3.4 -5.04601 | GGAACGACGCTGATA GTTG TACAT CAAC TTTTTGCTTTCTGGC TERM 362 268472 - 268448 - g 70 -3.5 -4.69464 | AAAACACGCGAAAAA GACGTGGTATT GCA AATAGCTCGCC GCCTGCGCTCTCTGA amiC 267812 - 269065 + | N-acetylmuramoyl-L-alanine amidase TERM 363 269086 - 269073 - f 84 -5.2 -5.31275 | opp_overlap 269073 GGGGATGATAAAAAA GCGC TGAATG GCGC TTTTTTTATCGAGAG TERM 364 269073 - 269086 + F 95 -5.9 -5.60993 | opp_overlap 269073 GGGGATGATAAAAAA GCGCT GAAT GGCGC TTTTTTTATCGAGAG TERM 365 269129 - 269116 - f 100 -8.1 -6.02919 | opp_overlap 269116 269115 GCAGAAACAAAAAAA CACCC AACA GGGTG CTTTAGTAATTGGTT mltA 269645 - 270742 + | membrane-bound lytic murein transglycosylase A TERM 366 270799 - 270779 - f 89 -12.6 -2.8655 | opp_overlap 270779 TTGACGGATATGACA GGGTGAGG GATAA CCTCACCC TTTTTAATTCTGAGG TERM 367 270779 - 270799 + F 100 -12.6 -4.93365 | opp_overlap 270779 TTGACGGATATGACA GGGTGAGG GATAA CCTCACCC TTTTTAATTCTGAGG ygdL 270819 - 271625 + | hypothetical protein TERM 368 271630 - 271667 + T 100 -17.1 -4.5442 | opp_overlap 271630 271631 271633, overlap 271631 GTCAGGGGTAAACAA TCAGGTCGGATGCGACG TGAA CGTCTTATCCGACCTGG TTTTGTGCTTAACCC TERM 369 271667 - 271630 - T 100 -12.7 -3.92542 | opp_overlap 271630 271631, overlap 271631 271633 GTCAGGGGTAAACAA TCAGGTCGGATGCGACG TGAA CGTCTTATCCGACCTGG TTTTGTGCTTAACCC TERM 370 271631 - 271666 + T 100 -18.4 -3.3217 | opp_overlap 271630 271631 271633, overlap 271630 TCAGGGGTAAACAAT CAGGTCGGATGCGACG TGAA CGTCTTATCCGACCTG GTTTTGTGCTTAACC TERM 371 271666 - 271631 - T 100 -16.2 -2.95204 | opp_overlap 271631 271630, overlap 271630 271633 TCAGGGGTAAACAAT CAGGTCGGATGCGACG TGAA CGTCTTATCCGACCTG GTTTTGTGCTTAACC TERM 372 271664 - 271633 - T 95 -13 -3.02639 | opp_overlap 271631 271630, overlap 271631 271630 AGGGGTAAACAATCA GGTCGGATGCGACG TGAA CGTCTTATCCGACC TGGTTTTGTGCTTAA ygdK 272119 - 271676 - | putative Fe-S metabolism protein (sufE-like) csdA 273324 - 272119 - | cysteine sulfinate desulfinase ygdI 273513 - 273740 + | hypothetical protein TERM 373 273784 - 273765 - f 100 -10.7 -5.86332 | opp_overlap 273765 GCAAGGTAAAAAAAA GCACCGC AATAAG GCGGTGC TACATTAATCACTAT TERM 374 273765 - 273784 + F 76 -10.7 -2.57423 | opp_overlap 273765 GCAAGGTAAAAAAAA GCACCGC AATAAG GCGGTGC TACATTAATCACTAT TERM 375 273850 - 273834 - f 80 -6.5 -4.76892 | opp_overlap 273834, overlap 273835 ACAGGAAGTGAAAAA GGGTAGC TAT GCTACCG TGGTCTGAATCGCAG TERM 376 273849 - 273835 - f 78 -10 -3.45051 | opp_overlap 273834, overlap 273834 CAGGAAGTGAAAAAG GGTAGC TAT GCTACC GTGGTCTGAATCGCA TERM 377 274947 - 274932 - g 70 -6.8 -4.12198 | opp_overlap 274941, overlap 274934 CAGAACTCGGTAAAA TAGCGG CTTT CCGCCA GTGGATTCTGGAAAA gcvA 274091 - 275008 + | DNA-binding transcriptional dual regulator TERM 378 275055 - 275067 + G 72 -6.2 -4.43037 | TTATGCTGATTTTTG CCGC CATCA GCGG TTTCATTTTTGTTGC ygdD 275027 - 275422 + | conserved hypothetical protein; putative inner membrane protein ygdE 275415 - 276515 + | putative methyltransferase TERM 379 276526 - 276564 + T 100 -12.4 -3.91072 | overlap 276530 GCTAATCTCTGACTA CCTGTGCCGGAAGCTG TTACTGT CTGCTTCCGGCATTGG TTTATCAGCGTTTAA TERM 380 276530 - 276560 + T 100 -12.6 -3.60798 | overlap 276526 ATCTCTGACTACCTG TGCCGGAAGCTG TTACTGT CTGCTTCCGGCA TTGGTTTATCAGCGT exo 277414 - 276569 - | exonuclease IX (5'-3' exonuclease) TERM 381 277425 - 277403 - G 100 -15.6 -3.57825 | overlap 277399 277397 TTGAGAAAACAGGAA GAGGCCTCGC AAA ACGAGGCCTC TGGAGAGCGATTAAT sdaB 278803 - 277436 - | L-serine deaminase II TERM 382 278026 - 278046 + g 72 -5.3 -4.4767 | opp_overlap 278026 TGATCCAATCAACAA CCGCCATCG GGT CAGTGGTGG TTTTATCCTGGCTGA TERM 383 278852 - 278833 - R 100 -12.8 -3.27786 | overlap 278825 278826 GTTAAAACGGAGGAA GCGCCGCC CGAA AGCGGCGC GAAAGAACTTAGCTG sdaC 280150 - 278861 - | putative serine transporter TERM 384 280693 - 280670 - R 75 -8.8 -3.66654 | overlap 280671 CAGCTGAATGGGAAA GCCCGACAAC GAAG GTTGCCGGGT GGAGGGGATTAAGTG TERM 385 280692 - 280671 - R 89 -12.3 -2.79671 | overlap 280670 AGCTGAATGGGAAAG CCCGACAAC GAAG GTTGCCGGG TGGAGGGGATTAAGT ygdH 282066 - 280702 - | hypothetical protein TERM 386 281033 - 281050 + g 81 -6.3 -4.86731 | gap 1 TTAAAGCTGTAGGCA TCGCCTGT ATC AC-GGCGA TTTTCTTTCACCAGC queF 283030 - 282182 - | NADPH-dependent 7-cyano-7-deazaguanine reductase syd 283099 - 283644 + | hypothetical protein TERM 387 283972 - 283962 - f 79 -6.8 -4.64383 | overlap 283966 AAGTATAAAGGAAAA CGCA GGA TGCG TTAAGGGACACCTCC TERM 388 284212 - 284183 - g 81 -10.7 -3.67175 | opp_overlap 284185, overlap 284179 284184 ATGCTGCAAAACGAA TCGGGAGCACTGT TTAT ACAGTGCTCCCTT TTTTTATTTCCTCGT TERM 389 284211 - 284184 - g 85 -14.2 -2.79823 | opp_overlap 284185, overlap 284183 284179 TGCTGCAAAACGAAT CGGGAGCACTGT TTAT ACAGTGCTCCCT TTTTTTATTTCCTCG TERM 390 284185 - 284210 + G 100 -17.7 -5.99154 | opp_overlap 284184 284183 284179 GCTGCAAAACGAATC GGGAGCACTGT TTAT ACAGTGCTCCC TTTTTTTATTTCCTC TERM 391 284410 - 284432 + G 85 -9.8 -4.2558 | opp_overlap 284406 284411, overlap 284411 TATGGACACGATGGA ACCGCTGGAG TGG CTCCAGTGGG TTTTAATCCCACGTA TERM 392 284431 - 284411 - g 72 -11.1 -3.11812 | opp_overlap 284410 284411, overlap 284406 ATGGACACGATGGAA CCGCTGGAG TGG CTCCAGTGG GTTTTAATCCCACGT TERM 393 284411 - 284431 + G 85 -13.3 -3.15027 | opp_overlap 284406 284411, overlap 284410 ATGGACACGATGGAA CCGCTGGAG TGG CTCCAGTGG GTTTTAATCCCACGT EFER_0269 284069 - 284602 + | hypothetical protein truC 284602 - 285384 + | tRNA pseudouridine synthase yqcA 285402 - 285848 + | putative flavoprotein TERM 394 285885 - 285859 - T 88 -12.3 -2.68071 | gap 1, overlap 285856 285855 TTTAATTCAAATCGA GACCCCGGCGCA ATTA TACGCCGGGG-C ATACTCGTCATACTT EFER_0272 286943 - 285945 - | conserved hypothetical protein; putative periplasmic binding protein TERM 395 286169 - 286193 + g 74 -6.5 -4.57837 | opp_overlap 286168 286169 AAGCGACAACATAAG GGAATTCACTG GTG TAGTTAATTCC TTTTTCGACAAATGT EFER_0273 288446 - 286944 - | hypothetical protein EFER_0274 288950 - 288471 - | hypothetical protein; putative membrane protein TERM 396 289515 - 289533 + H 71 -3 -4.94902 | TTGTGTTTTTGCACG GTGAGTCG TAT CGATGCGC TTTTTATACTAATTA TERM 397 289778 - 289755 - g 79 -10.4 -3.85092 | gap 1, opp_overlap 289773 ATTACCGATATGAAA GTCAT-TCCGG TCG CCGGACATGAC AGCATGTTGCTTAAT gudX 289716 - 291056 + | glucarate dehydratase TERM 398 291598 - 291574 - g 70 -10.7 -2.83403 | opp_overlap 291577, overlap 291573 GCTGCCGTATCAAAG CCAGCCGGATG ACT CATGCGACTGG TATCGCCTGCGTCAC gudD 291077 - 292417 + | (D)-glucarate dehydratase 1 TERM 399 292424 - 292447 + F 73 -8.2 -3.61398 | gap 1, opp_overlap 292421 GTGCGTTAATCATGA TGCCGG-TTCC CGA GGAAATCGGCA TTATTCACCCACAAA EFER_0277 292506 - 293660 + | Glycerate kinase TERM 400 293751 - 293702 - T 100 -16.7 -4.28774 | opp_overlap 293677, overlap 293704 293706 TCATTGAATTTAAAA TATATTATTAGCCGAATGGAGCG TTTG CGCTGCATCCGGCTAATAACATG TCACTCAGTCAGCAA TERM 401 293749 - 293704 - T 100 -19.3 -3.74381 | overlap 293702 293706 ATTGAATTTAAAATA TATTATTAGCCGAATGGAGCG TTTG CGCTGCATCCGGCTAATAACA TGTCACTCAGTCAGC TERM 402 293747 - 293706 - T 100 -19.7 -3.44792 | overlap 293704 293702 TGAATTTAAAATATA TTATTAGCCGAATGGAGCG TTTG CGCTGCATCCGGCTAATAA CATGTCACTCAGTCA barA 296531 - 293775 - | hybrid sensory histidine kinase, in two-component regulatory system with UvrY TERM 403 294725 - 294711 - G 71 -2.8 -4.87626 | TGCTAACAGCAAAAA GTCG GTCATTG CGAC GGCTTTATCCAGCCG TERM 404 295992 - 295977 - G 72 -5.4 -4.53705 | AATGCCTATACAAAA CAGCAT CATC ACGCTG GAGATAAAAATCTCT TERM 405 295993 - 296006 + g 70 -5.3 -4.37544 | AGCATCATCACGCTG GAGAT AAAA ATCTC TTTATATTGTTGTAA TERM 406 296056 - 296076 + g 73 -4 -4.75174 | opp_overlap 296058, overlap 296073 AACTCCAGTGCGACA TAGCCCAA CATAT TTTGGCTA TTTTTGGCTTCGCTA TERM 407 296631 - 296612 - g 83 -10 -4.09685 | overlap 296613 TTCTACTCTGCAAAA CGACGCGT GACG ACGCGTCA GATCATAACCGTTAC TERM 408 296630 - 296613 - g 75 -11.3 -3.05597 | overlap 296612 TCTACTCTGCAAAAC GACGCGT GACG ACGCGTC AGATCATAACCGTTA TERM 409 296773 - 296763 - g 81 -6.8 -4.68724 | TCACCGAAGATAAAA GGCA ATT TGCC CGGGCTAAAGTTGTT TERM 410 297445 - 297428 - g 75 -11.3 -3.10905 | opp_overlap 297438, overlap 297419 GCACAAGCCATTGAA TGGCTGG ATAT CCAGCCA CAGGATCGCGTGCTG TERM 411 297572 - 297598 + G 72 -5.8 -4.37092 | opp_overlap 297572 GGGCGAGAAAATGCA CGTGAAAATGGC TTA GCTAATGTCACG TTTTATCACGAAAAT rumA 296588 - 297886 + | 23S rRNA (uracil-5)-methyltransferase TERM 412 297895 - 297914 + F 86 -10 -3.91897 | CGTGTAATAATTGCA GCTTGTCG TTTA CGACAGGC TTTGTCCCTAAAGGA relA 297937 - 300171 + | (p)ppGpp synthetase I/GTP pyrophosphokinase chpR 300249 - 300497 + | antitoxin of the ChpA-ChpR toxin-antitoxin system TERM 413 300570 - 300590 + G 78 -11.1 -3.42699 | opp_overlap 300572, overlap 300572 CAAAAGGTAGCGAGC AAGCCGGAC ATC GTCCGGCTG TTGTCCTGAGTCCGT TERM 414 300572 - 300588 + G 95 -13.7 -3.28447 | opp_overlap 300572, overlap 300570 AAAGGTAGCGAGCAA GCCGGAC ATC GTCCGGC TGTTGTCCTGAGTCC TERM 415 300588 - 300572 - g 89 -13.7 -3.19656 | opp_overlap 300572 300570 AAAGGTAGCGAGCAA GCCGGAC ATC GTCCGGC TGTTGTCCTGAGTCC chpA 300497 - 300832 + | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease TERM 416 301365 - 301353 - g 74 -7.7 -4.11869 | opp_overlap 301353 301359 CAAAAAATCCAGAAA CGTTG CGC CAACG TTGGCTTTGACTGGA mazG 300903 - 301694 + | nucleoside triphosphate pyrophosphohydrolase TERM 417 302252 - 302231 - g 90 -11.5 -3.90744 | GTTCTGCGTAAAGAA CGCCGCGGT GATT ACCTCGGCG CAACCGTACAGGTTA pyrG 301922 - 303559 + | CTP synthetase TERM 418 303605 - 303575 - f 73 -8.2 -3.5944 | opp_overlap 303578 303581, overlap 303576 GTAAAAAAGTTAGAA CGGCAACGCGTACC CAG GGTACGCGTTGTTT GTCTGGAGTTTCAGT TERM 419 303604 - 303576 - f 81 -11.7 -2.7458 | opp_overlap 303578 303581, overlap 303575 TAAAAAAGTTAGAAC GGCAACGCGTACC CAG GGTACGCGTTGTT TGTCTGGAGTTTCAG TERM 420 303578 - 303602 + F 100 -18.7 -4.07562 | opp_overlap 303576 303575, overlap 303581 AAAAAGTTAGAACGG CAACGCGTACC CAG GGTACGCGTTG TTTGTCTGGAGTTTC TERM 421 303581 - 303599 + F 100 -14.6 -4.15029 | opp_overlap 303576 303575, overlap 303578 AAGTTAGAACGGCAA CGCGTACC CAG GGTACGCG TTGTTTGTCTGGAGT eno 303647 - 304945 + | enolase TERM 422 304935 - 304952 + T 71 -6.9 -4.17516 | opp_overlap 304935 304934 GTAAAGAGATCAAAG GCCAGGC ATAA GCCTGAC TTTATCTGATTTAAA TERM 423 304989 - 305018 + T 100 -9.3 -4.59109 | overlap 304991 AGCCTTCGGGCTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 424 304991 - 305016 + T 100 -16.3 -3.90762 | overlap 304989 CCTTCGGGCTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG insG 306328 - 305000 - | putative IS4 transposase; KpLE2 phage-like element TERM 425 306336 - 306361 + r 100 -13.4 -3.61398 | opp_overlap 306336 ATGTGCATAAAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 426 306361 - 306336 - R 100 -13.4 -5.61596 | opp_overlap 306336 ATGTGCATAAAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 427 306410 - 306429 + r 75 -2 -5.28176 | overlap 306412 CTTAACTGATCGGCA TTACAGCC TTCG GGCTGGCA TTTTTTATGGCTGAG EFER_0287 306635 - 306396 - | hypothetical protein EFER_0288 307329 - 306445 - | hypothetical protein EFER_0290 308471 - 307323 - | hypothetical protein ygcG 309418 - 308486 - | hypothetical protein EFER_0292 310010 - 309408 - | hypothetical protein TERM 428 310239 - 310252 + G 84 -3.7 -5.24551 | overlap 310240 TGAGGGTTACTTTAC CGGCG TCCC CGCCA TTTTTATTCGTTTAC TERM 429 310331 - 310342 + G 70 -5.8 -4.1585 | AAAAGCTTGAGGATC GGGA AGTC TCCC TTTTCAGCATTCTGG ygcF 310183 - 310854 + | hypothetical protein TERM 430 310880 - 310860 - f 73 -8.5 -3.72893 | opp_overlap 310873 310879, overlap 310879 TATTGCCTGATTAAA CATTTATAA GCG TTATAAATG GGTGGAACCTGTAAA TERM 431 310873 - 310913 + F 79 -8.6 -4.08279 | gap 1, opp_overlap 310860 310879, overlap 310879 AACATTTATAAGCGT TATAAATGGGTGGAA-CCT GTAA AGACTTCCACTCATTTATA TTCTTTGTCGCCTCT EFER_0294 311404 - 311547 + | hypothetical protein TERM 432 311762 - 311727 - f 76 -9.7 -3.35679 | overlap 311707 GGCGCGGATCTACAA CCCTGACTGACG-GGGG AGTT CCCCGCGCCAG-CGGGG ATAAACCGAGTGAGC TERM 433 312055 - 312083 + F 70 -9.5 -2.80612 | overlap 312054 GCTGCGGGAGTTCCC CACGCCAGCGG GGATAAA CCGTTGGCGAG ATTGTTAACGTTGCG EFER_0295 312262 - 312525 + | hypothetical protein TERM 434 312684 - 312665 - T 75 -8.5 -3.84451 | TCCTGTAAATGTAAA CCGGGCA TTTTTC CGCCCGG CCTTCCCCGATTACG TERM 435 312908 - 312920 + T 100 -9.1 -4.67048 | opp_overlap 312908 CCGCGATAGATACAA CCTGC GGT GCAGG TTTCTTTTACCATCA TERM 436 312920 - 312908 - T 75 -9.1 -3.64198 | opp_overlap 312908 CCGCGATAGATACAA CCTGC GGT GCAGG TTTCTTTTACCATCA ygcM 313251 - 312886 - | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) TERM 437 313658 - 313672 + G 70 -7.1 -4.0056 | overlap 313666 CCGATTTAACTCCCA CCCAG CTTGC CTGGG TTTCTGGCTATTTCT TERM 438 315178 - 315160 - g 76 -7.4 -4.28188 | TACGTACAAGACAAA CTGCGC GAACAGG GCGCAG AGCTGTGGCGCTGGA cysJ 313567 - 315366 + | sulfite reductase, alpha subunit, flavoprotein TERM 439 316185 - 316162 - g 80 -5.2 -4.90079 | gap 1, opp_overlap 316163, overlap 316163 316166 ACGGCAACAAGAAAA CCTACGCCCGC ACG GCGAGCG-AGT TTGGCTATCTGCCAC TERM 440 316182 - 316166 - g 75 -11.5 -2.88634 | opp_overlap 316163, overlap 316163 316162 CAACAAGAAAACCTA CGCCCGC ACG GCGAGCG AGTTTGGCTATCTGC TERM 441 316693 - 316724 + G 100 -13.8 -3.92373 | gap 1, overlap 316684 316683 CGACTTGCCCGCTGG CGATGGC-GGAAGCG GAG CGTTTCCTGCCGTCG TTTATCGATAACATC TERM 442 316726 - 316744 + G 76 -9 -3.72576 | GTTTCCTGCCGTCGT TTATCGAT AAC ATCGATAA TTTAATGGCGAAACA cysI 315366 - 317078 + | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding cysH 317142 - 317876 + | 3'-phosphoadenosine 5'-phosphosulfate reductase TERM 443 317897 - 317922 + F 80 -6.1 -4.77757 | GCCGGATAAAATAAA CGCCTCTGTCA GAAA TGATGGGGGTG TTTTAATTTTTGCGA TERM 444 318084 - 318054 - f 93 -9.1 -4.45083 | gap 1, opp_overlap 318053 318080 TCCAGATGGACAAAA GCCCCAGG-CGATA TTTC TATCAACCTGAGGC TCGCGTTCGAACGTA TERM 445 318624 - 318634 + G 85 -3.2 -5.32608 | TCACTTTCAGAGCAA TCTC CCG GGGA TTTTTTCAGTTTTTT TERM 446 319718 - 319707 - g 90 -4.4 -5.38326 | overlap 319713 319715 CCAATGAAACAAAAA CAGA AACT TCTG GATACTTATGGTCTG TERM 447 320884 - 320865 - g 77 -10 -3.63073 | TACACTCGGGAAGAA GGGATGAC CAGA GCCATCCC TGCAAATCCCAAATA ygcB 318234 - 320900 + | conserved hypothetical protein; putative member of DEAD box family TERM 448 320967 - 320989 + F 91 -7 -5.46706 | opp_overlap 320970 CCCTACTTAAGTAGG GAAGGTGCAC AAT GTACATCTTC TTTTTCTTTTCCGAT TERM 449 322475 - 322507 + G 75 -7.2 -4.38154 | gap 1, opp_overlap 322483 322485 GACTGTTGGTTTGGG GTATAAAACAGCCTT ACGC AAGGC-GTTATATAC TTTTGTGGAAGGTAT ygcL 321315 - 322823 + | hypothetical protein TERM 450 322940 - 322952 + G 78 -7.7 -4.4078 | TCCCTGCGTTTTATC GGTTG GTG CAACC TTTTGGTTGGGAAAA ygcK 322816 - 323298 + | hypothetical protein ygcJ 323311 - 324402 + | hypothetical protein ygcI 324405 - 325079 + | hypothetical protein TERM 451 325541 - 325530 - g 75 -4.4 -4.74103 | opp_overlap 325540, overlap 325540 TGGGGAAGGTAAAAA TGGA AAAA TCCA AACGGTTTGCTTTGA ygcH 325066 - 325665 + | hypothetical protein TERM 452 326308 - 326322 + G 85 -8.6 -4.4572 | opp_overlap 326308 GGGTTTGTGCATACA GGAAAG CCT CTTTCC TTTGTTTACGATATT ygbT 325681 - 326598 + | hypothetical protein ygbF 326600 - 326884 + | hypothetical protein TERM 453 327401 - 327382 - T 72 -7.8 -3.86897 | opp_overlap 327378 GCCAGCGGGGATAAA CCGCCTAT CAGA ATTGGCGG TGAACTTTTATTTGT EFER_0310 327538 - 327389 - | hypothetical protein EFER_0311 327635 - 327519 - | hypothetical protein EFER_0312 328007 - 327696 - | hypothetical protein iap 329297 - 328260 - | aminopeptidase in alkaline phosphatase isozyme conversion TERM 454 328398 - 328414 + g 77 -5.8 -4.62872 | ATGCCAGCTATTTCC CATCGG GAAGG CCGGTG TTTTTGAGCGTTGCT cysD 329549 - 330457 + | sulfate adenylyltransferase, subunit 2 cysN 330459 - 331886 + | sulfate adenylyltransferase, subunit 1 TERM 455 331949 - 331973 + G 100 -15.1 -3.3771 | opp_overlap 331943 331952, overlap 331952 GTGCAACAACGCGAG CAACACCACGG TCA TCGTGGTGTTG TGTTGTGGTTTACCG TERM 456 331970 - 331952 - g 70 -10.3 -3.20367 | opp_overlap 331949 331952, overlap 331943 CAACAACGCGAGCAA CACCACG GTCAT CGTGGTG TTGTGTTGTGGTTTA TERM 457 331952 - 331970 + G 84 -11 -3.81602 | opp_overlap 331952 331943, overlap 331949 CAACAACGCGAGCAA CACCACGG TCA TCGTGGTG TTGTGTTGTGGTTTA cysC 331886 - 332491 + | adenosine 5'-phosphosulfate kinase TERM 458 332499 - 332516 + F 93 -12.7 -3.15544 | GATCCTGAGACCCCA CCGGGCT TGCA AGCCCGG TTCGTCAAAGTAACA ygbE 332505 - 332864 + | putative inner membrane protein TERM 459 332957 - 332933 - f 70 -7.9 -3.70773 | opp_overlap 332932 332954 332955, overlap 332934 GGGTATACGTAACAA TGGACAAATGT GGT ACATTTGCCCG CGTTGTCGCGGCTTT TERM 460 332956 - 332934 - f 81 -11.4 -2.82142 | opp_overlap 332932 332954 332955, overlap 332933 GGTATACGTAACAAT GGACAAATGT GGT ACATTTGCCC GCGTTGTCGCGGCTT ftsB 333039 - 333350 + | cell division protein ispD 333369 - 334079 + | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase ispF 334079 - 334558 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase truD 334555 - 335604 + | pseudoruidine synthase TERM 461 335767 - 335798 + G 77 -6.7 -4.49906 | gap 2 TGAAAATGGCGATAT CGCAGTACAGATGGG CACG CCTA-CTG-ACTGCG TTTATTTAGGTGTTA TERM 462 335907 - 335951 + G 100 -13.6 -3.67296 | gap 1 ATTCCGGTACGGTAG CCGCC-GCGATGGAAGGCC GTCATTTA GGCTTTCCGGCGCTGGCGG TTTCCCTGGATGGTC surE 335585 - 336346 + | broad specificity 5'(3')-nucleotidase and polyphosphatase TERM 463 336750 - 336761 + G 70 -7.2 -4.08945 | ATGGCAAGGTTGGCA GGCG CGTG CGCC TTTTGACGCCATCAT pcm 336340 - 336966 + | L-isoaspartate protein carboxylmethyltransferase type II EFER_0326 337299 - 337084 - | hypothetical protein TERM 464 337140 - 337152 + Gg 86 -10.5 -3.96224 | CAAAATTCACCGTTC GCCGC ATT GCGGC TTTGTCACTGGTTTC TERM 465 337516 - 337493 - gH 83 -5.3 -5.04385 | TATACCGTGAAAAAA GGCGACACA CTTTTC TATATCGCC TGGATTACTGGCAAC TERM 466 337787 - 337773 - gH 72 -5 -4.65078 | AGAGTGCTAACAAAA TGTTGC CGA ACAACA AGCCAACTGCGACGG TERM 467 337987 - 338012 + GH 72 -7.5 -3.87815 | opp_overlap 337981 337986 337990, overlap 337981 337990 TAAAGGACAGGCAAT CAACGCGACCG CAGA TGGCCGTGTTG TTTATGCCGGTAACG nlpD 337109 - 338251 + | outer membrane lipoprotein rpoS 338431 - 339306 + | RNA polymerase, sigma S (sigma 38) factor TERM 468 339325 - 339348 + T 100 -14.6 -5.67711 | opp_overlap 339325 AGCATCTGTCAGAAA GGCCAGTCTC AAGC GAGGCTGGCC TTTTTCTTTTATTTG TERM 469 339348 - 339325 - T 100 -12.4 -3.87075 | opp_overlap 339325 AGCATCTGTCAGAAA GGCCAGTCTC AAGC GAGGCTGGCC TTTTTCTTTTATTTG EFER_0329 339867 - 339427 - | Transcriptional regulator hosA TERM 470 339858 - 339872 + g 95 -10 -4.65895 | CGGGCAAACTATCTG CCGCTA TCA TAGCGG TTTTTCAGTGACGCA TERM 471 340462 - 340496 + G 77 -10.1 -3.60098 | gap 1, opp_overlap 340462, overlap 340465 AAACGGTAGATGACA TTG-TCCACCACGTGG TAGC CCGCGTGCTGGATCAA TTTGGCCTCGAACAT TERM 472 340465 - 340492 + G 73 -12 -2.65354 | opp_overlap 340462, overlap 340462 CGGTAGATGACATTG TCCACCACGTGG TAGC CCGCGTGCTGGA TCAATTTGGCCTCGA EFER_0330 339981 - 340574 + | conserved putative non-oxidative reversible hydroxyarylic acid decarboxylase EFER_0331 340574 - 342001 + | conserved putative non-oxidative hydroxyarylic acid decarboxylase activity EFER_0332 342012 - 342248 + | conserved putative non-oxidative reversible hydroxyarylic acid decarboxylase TERM 473 342252 - 342292 + T 74 -6.9 -4.26881 | gap 1, opp_overlap 342256 342257, overlap 342248 342255 342256 GATAAGCGCTAATAA AAAAG-GGCCGGGTAGAG GCTTTG CTTTACCCGGCCACGTTA TTTGATTTTATAAAA TERM 474 342255 - 342289 + T 79 -8.6 -4.23876 | gap 1, opp_overlap 342256 342257, overlap 342252 342248 342256 AAGCGCTAATAAAAA AG-GGCCGGGTAGAG GCTTTG CTTTACCCGGCCACG TTATTTGATTTTATA TERM 475 342287 - 342256 - T 100 -10.1 -5.45652 | opp_overlap 342255 342252 342248 342256, overlap 342257 AGCGCTAATAAAAAA GGGCCGGGTAGAG GCTTTG CTTTACCCGGCCA CGTTATTTGATTTTA TERM 476 342256 - 342288 + T 86 -12.1 -3.12699 | gap 1, opp_overlap 342256 342257, overlap 342255 342252 342248 AGCGCTAATAAAAAA G-GGCCGGGTAGAG GCTTTG CTTTACCCGGCCAC GTTATTTGATTTTAT TERM 477 342286 - 342257 - T 100 -13.6 -3.86307 | opp_overlap 342256 342255 342252 342248, overlap 342256 GCGCTAATAAAAAAG GGCCGGGTAGAG GCTTTG CTTTACCCGGCC ACGTTATTTGATTTT pphB 342946 - 342290 - | serine/threonine-specific protein phosphatase 2 TERM 478 342952 - 342987 + r 100 -10.6 -5.38326 | TAGATGGCATGGTTT TACCCTGTAAAATAAG ATTT CCTATTATACAGGGTA TTTTTATTTGATTCG TERM 479 343019 - 343045 + r 90 -11 -3.9461 | opp_overlap 343019 CAGTTGTCGTTAATA TTCCCGATAG CAAAAAA CTATCGGGAA TTGTTATTACACCAG TERM 480 343045 - 343019 - R 83 -11.7 -3.01924 | opp_overlap 343019 CAGTTGTCGTTAATA TTCCCGATAGC AAAAA ACTATCGGGAA TTGTTATTACACCAG mutS 345613 - 343052 - | methyl-directed mismatch repair protein eryD 346805 - 345852 - | Ery operon repressor (Erythritol transcriptional regulator) eryC 347944 - 346832 - | D-erythrulose-phosphate dehydrogenase eryB 349310 - 347775 - | erythritol phosphate dehydrogenase TERM 481 348875 - 348885 + gr 85 -6.8 -4.8622 | opp_overlap 348864 AATACTCAAACCCTT TGCG ATA CGCA TTTTTGATTGGCGCG eryA 350881 - 349319 - | erythritol kinase TERM 482 349533 - 349543 + g 72 -8.2 -3.71321 | ATCATTGCCGCTCCG GCGG CAC CCGC TTCTTCACGTTTGCT TERM 483 351331 - 351341 + G 72 -8.2 -3.72051 | AACATTCACGTCGTC GCGC CAG GCGC TTTACGGTTATTGGC EFER_0339 351135 - 351941 + | putative lipoprotein EFER_0340 351938 - 353482 + | putative sugar transporter subunit of ABC superfamily: ATP-binding component TERM 484 353573 - 353563 - g 74 -2.4 -5.1675 | CTACGCACCAAAAAA GGCC CAG GGCT TGCGCATATCCTGCT EFER_0341 353479 - 354555 + | putative sugar transporter subunit: membrane component of ABC superfamily TERM 485 354961 - 354951 - g 79 -4.6 -5.02074 | GGATCGGTGAAAAAA GCGA TCG CCGC CAATATTCCGGTGTT TERM 486 355204 - 355194 - g 72 -6.8 -4.1822 | CCTGATTTGAAGAAA TCCG GGT CGGA GGTAGCAAACTGGGA EFER_0342 354642 - 355592 + | putative ABC transporter, periplasmic sugar-binding protein precursor TERM 487 355605 - 355624 + G 88 -10.6 -4.10178 | overlap 355599 355598 355606 TAGTGCCGTGACCCG CGGGGGCG TTTT CGCCCCCC TTTATGATATTCTTA TERM 488 355606 - 355623 + G 87 -14.1 -3.05022 | overlap 355599 355598 355605 AGTGCCGTGACCCGC GGGGGCG TTTT CGCCCCC CTTTATGATATTCTT EFER_0343 355597 - 356532 + | putative transcriptional regulator of sugar metabolism, DeoR family ygbA 356678 - 357067 + | hypothetical protein EFER_0345 357516 - 357088 - | Putative molybdenum-pterin-binding-protein fhlA 359638 - 357548 - | DNA-binding transcriptional activator TERM 489 359470 - 359522 + g 100 -13.6 -3.60792 | gap 2, opp_overlap 359459 359491, overlap 359472 AGTACGACGCACGTT GC-GTCTGCGCTTGCC-ACAACAC GATGGCG GCGTTGTCGGCCAGCGCAGACTGC TTTACCAGTTGCGAA TERM 490 359472 - 359519 + g 90 -15 -2.92667 | gap 1, opp_overlap 359459 359491, overlap 359470 TACGACGCACGTTGC GTCTGCGCTTGCC-ACAACAC GATGGCG GCGTTGTCGGCCAGCGCAGAC TGCTTTACCAGTTGC TERM 491 359674 - 359654 - R 79 -11.1 -3.18264 | overlap 359655 TTTGCTATCCAGGAA TGCACCGCA ACC TGCGGTGCT AAAAGAAAATTACTA TERM 492 359673 - 359655 - R 100 -14.6 -2.50816 | overlap 359654 TTGCTATCCAGGAAT GCACCGCA ACC TGCGGTGC TAAAAGAAAATTACT hypE 360754 - 359786 - | carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein hypD 361914 - 360793 - | protein required for maturation of hydrogenases TERM 493 361716 - 361704 - G 72 -10.5 -3.02471 | TCGGCAGTACACATA CCGGG CAA CCCGG ACCGTGGATAAACTC hypC 362186 - 361914 - | protein required for maturation of hydrogenases 1 and 3 TERM 494 362064 - 362028 - G 88 -12.4 -3.60296 | gap 1 TACGCTCATGGCAAA GCCA-ACGTGAACCAGT ACCC ACTGGCCCACGCGTGGC TGACCGTTTTCATCG TERM 495 362100 - 362132 + g 88 -12.8 -3.63895 | gap 1, opp_overlap 362094, overlap 362127 GCCGACTAACGTTAG GTCGACGTC-GCGCT GAAT ACCGCAGACGTCGAC TTTCGCCTGGTTGCC hypB 363049 - 362177 - | GTP hydrolase involved in nickel liganding into hydrogenases TERM 496 362773 - 362786 + g 75 -4.5 -4.82901 | GCGCGCGGTTGCGTT CAGCC AGAC GGTTG TTTTTGTCCAGCACG hypA 363403 - 363053 - | protein involved in nickel insertion into hydrogenases 3 TERM 497 363659 - 363644 - g 73 -4 -4.8384 | gap 1, overlap 363646 363654 GAAATAAGCGAAAAA GC-CGAT TAC ATCGCGC AGCGGCACCGTCGCC hycA 363617 - 364078 + | regulator of the transcriptional regulator FhlA TERM 498 364145 - 364183 + F 100 -11.9 -4.2558 | gap 1 CTAACTGGAAATGGG CGTGTCGA-GGGATGTCA AAAA TGACATCTCATCGGCATG TTTTCGTCAAAAATG hycB 364221 - 364832 + | hydrogenase 3, Fe-S subunit hycC 364829 - 366655 + | hydrogenase 3, membrane subunit hycD 366658 - 367581 + | hydrogenase 3, membrane subunit hycE 367599 - 369308 + | hydrogenase 3, large subunit hycF 369318 - 369860 + | formate hydrogenlyase complex iron-sulfur protein TERM 499 370082 - 370100 + G 72 -5.2 -4.49756 | overlap 370084 ATTAAAGTTGTGCCG TCTCCGCG TCA TGCGGATA TTTTACTATTTACCG hycG 369860 - 370627 + | hydrogenase 3 and formate hydrogenase complex, HycG subunit hycH 370624 - 371034 + | protein required for maturation of hydrogenase 3 TERM 500 371171 - 371161 - g 70 -6.8 -4.14243 | TAGCGCACCGGAAAA CGAC ATC GTCG CCATCCGTGAACTGC TERM 501 371356 - 371382 + G 70 -3.7 -4.7254 | gap 1, overlap 371356 371359 TGGTGAAGTGATTTT CC-TCGGTATCC AGCC GGATATCGTCGG TTTTTACTACCCGAT hycI 371027 - 371497 + | protease involved in processing C-terminal end of HycE ascB 373080 - 371656 - | cryptic 6-phospho-beta-glucosidase TERM 502 372303 - 372292 - G 84 -3.6 -5.29782 | CACATCGATAAAAAA CAGG TTTT CCCG GTCTTTCTCCAGCGC ascF 374546 - 373089 - | fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component ; IIC component ascG 374803 - 375816 + | DNA-binding transcriptional repressor TERM 503 375829 - 375858 + F 72 -7.9 -3.77789 | opp_overlap 375831, overlap 375829 375831 TAAGCATTGTCATCA CATGTCATCGTCA CTAG TGTCGATGACATC GTTTTTTCTGCATTG TERM 504 375829 - 375859 + F 100 -7.7 -5.31456 | gap 1, opp_overlap 375831, overlap 375829 375831 TAAGCATTGTCATCA C-ATGTCATCGTCA CTAG TGTCGATGACATCG TTTTTTCTGCATTGC TERM 505 375831 - 375856 + F 80 -10.5 -3.45403 | opp_overlap 375831, overlap 375829 375829 AGCATTGTCATCACA TGTCATCGTCA CTAG TGTCGATGACA TCGTTTTTTCTGCAT TERM 506 375856 - 375831 - f 75 -10.5 -2.79302 | opp_overlap 375831 375829 375829 AGCATTGTCATCACA TGTCATCGTCA CTAG TGTCGATGACA TCGTTTTTTCTGCAT TERM 507 375864 - 375878 + F 82 -8.6 -4.27211 | CGATGACATCGTTTT TTCTGC ATT GCAGAA TTTAATTTCTTTAAA TERM 508 376480 - 376466 - g 95 -9.2 -4.85599 | opp_overlap 376465 376466 CTGAGCGCAGAAAAA CGCCGC CGC ACGGCG CTGATGTTCTAAAAA hydN 375965 - 376492 + | formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit TERM 509 376666 - 376656 - g 77 -3.2 -5.09426 | opp_overlap 376663 CTTAATGGCAAAAAA CACA TCT TGCG GTGTCCAACTGCGTA TERM 510 378298 - 378312 + G 90 -11.4 -3.86346 | TGGCGTAACCTGCTG GCGCAG TGC CTGCGC TTTGTGCCGGAGTGG hypF 376645 - 378897 + | carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases TERM 511 378970 - 379003 + T 85 -9.5 -4.08216 | opp_overlap 378980 378982 378983, overlap 378971 CATTCGCTCCCCGTA GGTCGGATAAGACGC GCCA GCGTCGCATCCGACA TTTTGGGCACACTAG TERM 512 378971 - 379002 + T 95 -13 -3.04715 | opp_overlap 378980 378982 378983, overlap 378970 ATTCGCTCCCCGTAG GTCGGATAAGACGC GCCA GCGTCGCATCCGAC ATTTTGGGCACACTA norW 380157 - 379024 - | NADH:flavorubredoxin oxidoreductase TERM 513 379169 - 379208 + g 81 -7.1 -4.67038 | gap 1, opp_overlap 379149, overlap 379153 379164 379201 CAGCGCAAATCCCGA CGCTGG-GTTTCCCCTGC CAGAT GCAGCGGTAATTCCGGCG TTTTGATTTTCACCA TERM 514 379982 - 379961 - G 77 -12.3 -2.72043 | overlap 379960 379948 AACTGCTCGGCAAAT TCACCCGCC GTCT GGCGGGTAA GGTCGTCGGCACGTT norV 381593 - 380154 - | flavorubredoxin oxidoreductase TERM 515 381203 - 381217 + g 70 -7 -4.09739 | TGCCGTTGCCGATAT CCAGCG TGT CGCCGG TTTTCACCACGTTGA TERM 516 381494 - 381508 + g 90 -7.8 -4.76963 | overlap 381495 GGTAGCTGTTGTAGC TGCTGC CGC GCAGCG TTTTATATTCTGTGC TERM 517 381495 - 381507 + g 71 -9.1 -3.45093 | overlap 381494 GTAGCTGTTGTAGCT GCTGC CGC GCAGC GTTTTATATTCTGTG TERM 518 383096 - 383128 + G 78 -12.6 -2.90075 | TGCTTTTCCTGAGGT GACGTTGCCGCCGC CAGAA GCGGCGGCGGTGCC TATCGTTAAGCAAAA norR 381780 - 383294 + | DNA-binding transcriptional activator gutQ 384256 - 383291 - | putative phosphosugar-binding protein TERM 519 383355 - 383376 + g 70 -5.1 -4.37711 | gap 1, overlap 383357 383359 AGTTTGCCGTTTTCA TCTACCACCG GTG CGGCGGT-GA TTTTGCGTTTCATCA mltB 384510 - 385595 + | membrane-bound lytic murein transglycosylase B TERM 520 385604 - 385628 + TF 100 -9.3 -4.81163 | opp_overlap 385596 385608, overlap 385606 TCAGTAACTCTTTGC AAGAGGGAGGT TAA ACTTCCCTCTG TTTTCTTACTGTTTA TERM 521 385606 - 385626 + TF 100 -11.9 -3.99924 | opp_overlap 385596 385608, overlap 385604 AGTAACTCTTTGCAA GAGGGAGGT TAA ACTTCCCTC TGTTTTCTTACTGTT EFER_0373 386131 - 385634 - | hypothetical protein TERM 522 385938 - 385954 + gF 72 -5.1 -4.56597 | CGCTTTTTCTTTACC GACTGGT CGC AACAGTC TTTTTCCGGAACGCA ygaD 386056 - 386553 + | hypothetical protein recA 386633 - 387694 + | DNA strand exchange and recombination protein with protease and nuclease activity TERM 523 387710 - 387737 + F 91 -12 -3.46167 | opp_overlap 387715, overlap 387715 TCGTCTTGTTTGATA CACAAGGGTCGC ATCT GCGGCCCTTTTG CTTTTTAAGTTGTAA TERM 524 387732 - 387715 - f 73 -8.3 -3.58726 | opp_overlap 387710 387715 TTGTTTGATACACAA GGGTCGC ATCT GCGGCCC TTTTGCTTTTTAAGT TERM 525 387715 - 387732 + F 100 -10.5 -4.78661 | opp_overlap 387715, overlap 387710 TTGTTTGATACACAA GGGTCGC ATCT GCGGCCC TTTTGCTTTTTAAGT recX 387762 - 388262 + | regulatory protein for RecA alaS 388390 - 391020 + | alanyl-tRNA synthetase csrA 391255 - 391440 + | pleiotropic regulatory protein for carbon source metabolism TERM 526 392016 - 392001 - f 73 -9 -3.42996 | overlap 392015 CACCAGGGAGGATAA CGTTGC TTTA GCAACG GCCCGAAGGGCGAGC TERM 527 392033 - 392015 - f 72 -9.5 -3.14211 | overlap 392001 ACGTTGCTTTAGCAA CGGCCCG AAGGG CGAGCCG TAAGGCGAGTAATCC TERM 528 392431 - 392416 - f 73 -9 -3.54743 | overlap 392430 CACCAGGAAGGATAA CGTTGC TTTA GCAACG GCCCGAAGGGCGAGC TERM 529 392706 - 392691 - f 73 -9 -3.4252 | overlap 392705 CTCCAGGGAGGATAA CGTTGC GGCA GCAACG GCCCGAAGGGCGAAC yqaB 392897 - 393463 + | putative hydrolase yqaA 393460 - 393888 + | conserved hypothetical protein; putative inner membrane protein gshA 393961 - 395517 + | gamma-glutamate-cysteine ligase TERM 530 395548 - 395531 - f 100 -11.3 -5.58522 | GACAGAAAAGAAAAA GGCCACT CGTG AGTGGCC AAAATTTCATCTCTG luxS 395667 - 396182 + | S-ribosylhomocysteinase TERM 531 396230 - 396198 - T 78 -9.8 -3.51825 | gap 1, opp_overlap 396201, overlap 396200 396201 TCAGTTTAAGCAGAA GAGGCCGGGCTGGTG AAAT CACC-GCCCGGCTTT TATTACCTGTCAGTC TERM 532 396228 - 396200 - T 95 -12.4 -3.33214 | gap 1, opp_overlap 396201, overlap 396198 396201 AGTTTAAGCAGAAGA GGCCGGGCTGGTG AAAT CACC-GCCCGGCT TTTATTACCTGTCAG TERM 533 396201 - 396227 + T 100 -15.9 -4.70169 | gap 1, opp_overlap 396200 396198 396201 GTTTAAGCAGAAGAG GCCGGGCTGGTG AAAT CACC-GCCCGGC TTTTATTACCTGTCA TERM 534 396227 - 396201 - T 100 -15.9 -2.59447 | gap 1, opp_overlap 396201, overlap 396200 396198 GTTTAAGCAGAAGAG GCCGGGCTGGTG AAAT CACC-GCCCGGC TTTTATTACCTGTCA EFER_0383 397345 - 396233 - | putative RNA related enzyme TERM 535 396957 - 396924 - G 72 -8.9 -3.78775 | gap 1 GCCGTGAGCAGCAAA CGCTCCGGTT-CCGGA CGT TCCAGTAACCATAGCG GTAACCCATGCAGAC EFER_0384 398049 - 397342 - | hypothetical protein TERM 536 397736 - 397724 - G 77 -3.3 -5.14985 | overlap 397725 GCAAACAGATAAAAA TCCTG CTC CAGGG CGCGATATTCAATCG TERM 537 398187 - 398170 - R 70 -7.7 -3.73904 | overlap 398171 AAAGAGAGTTAACAA CCTGAGC GAAT GCTCAGA ACCGGTTAATGGTGA TERM 538 398281 - 398296 + r 80 -10.4 -3.55801 | opp_overlap 398281 ATGAGCAAATAAAAA GGGAGC CGCA GCTCCC TTTAACAACCTTAGT TERM 539 398296 - 398281 - R 100 -10.4 -5.34309 | opp_overlap 398281 ATGAGCAAATAAAAA GGGAGC CGCA GCTCCC TTTAACAACCTTAGT emrB 399845 - 398307 - | multidrug efflux system protein emrA 401034 - 399862 - | multidrug efflux system TERM 540 400030 - 400050 + g 73 -3.9 -4.74801 | opp_overlap 400022 GGATAAACCGATACG CAGCGGG TATTGCT CCAGCTG TTTTTGGTCCAGTTC TERM 541 400623 - 400634 + g 72 -5.8 -4.38712 | AGTCGCTTTGTGCTT TCGC GAGG GCGA TTTTCTGCACCTCAA TERM 542 400715 - 400725 + g 70 -4.6 -4.57073 | overlap 400700 400697 ACGCTGGAAGCCAGT GCCG TTT TGGC TTTTTCAAACGCCTG TERM 543 401113 - 401090 - R 100 -12.5 -4.56597 | opp_overlap 401077 401089 401088 401086 CCTGCTTGCCAAAAA GGCCAGCAT GTTGCG ATGCTGGCC AGTCATTTTTTCTGT mprA 401691 - 401161 - | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux ygaH 402117 - 401782 - | conserved hypothetical protein; putative inner membrane protein ygaZ 402844 - 402107 - | putative transporter EFER_0390 404153 - 402969 - | putative transport protein (ousB-like) TERM 544 404335 - 404303 - R 75 -10.6 -2.87931 | gap 1 GGCATTGTGTACAGA GCGGCGGATGAGGCA AAAG CGCCTTATCCGCC-C GAATAAAAATTACTT proX 405337 - 404345 - | glycine betaine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 545 405385 - 405367 - R 100 -12.4 -4.11216 | TTGGCAGGGTGAAAA TGCCCGGC GTC ACCGGGCA AGTGCAGAGTTACTT proW 406459 - 405395 - | glycine betaine transporter subunit ; membrane component of ABC superfamily proV 407654 - 406452 - | glycine betaine transporter subunit ; ATP-binding compoent of ABC superfamily TERM 546 407895 - 407871 - R 90 -7.2 -5.14477 | TAGATAGCGAAAAAA CGCCTGAA TATTGTGGT TTCAGGCG AATAATGCAACAGAG nrdF 408969 - 408010 - | ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like nrdE 411123 - 408979 - | ribonucleoside-diphosphate reductase 2, alpha subunit TERM 547 410601 - 410591 - GR 79 -2.4 -5.17353 | ATACGCAGCAAAAAA CAGG AAA CCAG TTCGCCGCGCTGCCG nrdI 411506 - 411096 - | protein that stimulates ribonucleotide reduction nrdH 411748 - 411503 - | glutaredoxin-like protein EFER_0398 412388 - 411957 - | hypothetical protein EFER_0399 412476 - 413810 + | putative fused protein: aminotransaminase/transcriptional regulator, GntR family TERM 548 413835 - 413815 - T 100 -9 -5.15969 | CCTTAAGCTAAAAAA CCCCGAAA TCAGG TTCCGGGG TCAAGACGCGTATTT ygaM 414207 - 413866 - | hypothetical protein TERM 549 414525 - 414515 - g 70 -5.4 -4.43681 | CATCCAACATTAAAA GAAC GCA GTTC GACACTGGCTGAACC ygaC 414347 - 414691 + | hypothetical protein TERM 550 414719 - 414693 - T 93 -12.2 -3.68619 | overlap 414695 GCGAAGCCAGTTAAA GACGCGACTGGC GAT GCCAGTCGCGAA AAGAAGAATCAAGCT TERM 551 414717 - 414695 - T 100 -19.2 -3.42283 | overlap 414693 GAAGCCAGTTAAAGA CGCGACTGGC GAT GCCAGTCGCG AAAAGAAGAATCAAG ygaW 415267 - 414728 - | putative inner membrane protein TERM 552 416106 - 416089 - g 86 -6.2 -5.13521 | overlap 416077 416091 AAAGCAGCTAAAAAA CGCCAG CCGCGT CCGGCG AAATATAAATTCACT stpA 415825 - 416226 + | DNA binding protein, nucleoid-associated ygaP 416797 - 416273 - | conserved hypothetical protein; putative inner membrane protein with hydrolase activity ygaV 417106 - 416807 - | putative DNA-binding transcriptional regulator TERM 553 417238 - 417250 + H 77 -6.3 -4.58395 | AATTACTACGCTTAA GAGAT AAA ATCTC TTTTTAAACAATGAG yqaE 417289 - 417447 + | hypothetical protein TERM 554 417463 - 417482 + F 100 -12.8 -3.29649 | ACCTGTCCTCACCCC CGCGGCGT TAAC GCGCCGCG TTCCTCTGCTACACT TERM 555 417915 - 417901 - g 71 -2.8 -4.77567 | overlap 417903 ATCTGTACAATAAAA TCTTCG AAG CGAATA AACCGATGCTGAAAA TERM 556 417953 - 417931 - g 88 -10.6 -4.1196 | overlap 417918 417932 AACCGATGCTGAAAA GCCCGGATAA AAT TTATCCGGGG CAGGTGTTACGTATT TERM 557 417952 - 417932 - g 87 -14.1 -3.06694 | overlap 417918 417931 ACCGATGCTGAAAAG CCCGGATAA AAT TTATCCGGG GCAGGTGTTACGTAT ygaU 417531 - 417980 + | hypothetical protein csiR 418643 - 417981 - | DNA-binding transcriptional dual regulator TERM 558 418073 - 418048 - G 73 -11.8 -2.56596 | opp_overlap 418046, overlap 418044 TGGCGCATTAACTCA CTGGCGCGCG CGGTAT CTCGCGCCAG TACCGCCGCAGTCAG TERM 559 418438 - 418415 - G 70 -6.8 -4.07568 | gap 1, overlap 418417 CGCGGGCGTCGAAAA TATC-GAGCAG CTC CTGCTCTGACA TAGACGCCACCCGAT gabP 420064 - 418664 - | gamma-aminobutyrate transporter TERM 560 419550 - 419538 - G 71 -2.6 -5.01535 | GCATAAGGATAAAAA CCGC TAATT GCGA CTGCACCAAGGAAAA TERM 561 419582 - 419570 - G 71 -3.3 -4.78981 | overlap 419571 ACCAAGGAAAATAAA GGCCA GAA TGGCA ATGACTTTGCACAGC TERM 562 420271 - 420232 - R 73 -8.7 -3.53811 | gap 2, opp_overlap 420224, overlap 420213 420268 420270 TGGATGCGGCGTAAA CGCCTTATCCGACC-A-GG ATCC CCGTAGGCCGGACAAGACG CACAGCGTCGCCTCC TERM 563 420280 - 420268 - R 71 -9.1 -3.30124 | overlap 420232 420270 CCGTAGGCCGGACAA GACGC ACA GCGTC GCCTCCGGCATGGTG gabT 421581 - 420301 - | 4-aminobutyrate aminotransferase, PLP-dependent gabD 423043 - 421595 - | succinate-semialdehyde dehydrogenase I, NADP-dependent TERM 564 422263 - 422290 + g 79 -2.6 -5.28755 | gap 1, opp_overlap 422262 422261 422263 CAAAGACAATAAACG GTG-CGTTGCCGC CCA GCTCCAGCGACAC TTTTTTGATGTCTTT TERM 565 422538 - 422486 - G 74 -9.9 -3.50393 | gap 3, opp_overlap 422523 422535 CGCCAGCGCAGAGAA CGGCGTCTGACTGGCGGGCTTCAGCA CCAT CG-TGCAGCCTGCC-GCCAG-CGCCG GACCGGCTTTACGGG ygaF 424334 - 423066 - | putative enzyme TERM 566 423595 - 423585 - G 88 -8.2 -4.60041 | ATGCACGCCCAAAAA CGGC ATT GCCG GGTCGGGGATGGGGT TERM 567 423775 - 423798 + g 71 -2.4 -4.94902 | gap 1, overlap 423749 423776 TCATATTCGCCGCCC TGGCG-GGT ACGTATC ACCACGCCG TTTTTATGCTCATTA ygaT 425331 - 424354 - | hypothetical protein TERM 568 425593 - 425566 - R 100 -18.6 -5.18995 | opp_overlap 425569 AAGAGAATAGAAAAA GAACCCCTGATG TTTC CATCAGGGGTTC TCGGTACAACATCAC TERM 569 425569 - 425590 + r 100 -14.5 -3.35798 | opp_overlap 425566 AGAATAGAAAAAGAA CCCCTGATG TTTC CATCAGGGG TTCTCGGTACAACAT TERM 570 425732 - 425716 - R 100 -12.3 -6.25741 | AAATAATAAAAAAAA GCCCATC AAT GATGGGC TATCCAGAAATGGGA TERM 571 425896 - 425874 - R 74 -6.4 -4.50193 | opp_overlap 425872 425877, overlap 425877 ATGAATCAATCAAAA TTATCATGAT TCC ATCATGATTA TCTTTTCACTTCTCC TERM 572 425877 - 425893 + r 74 -8.1 -3.99228 | opp_overlap 425874 425877, overlap 425872 AATCAATCAAAATTA TCATGAT TCC ATCATGA TTATCTTTTCACTTC TERM 573 426223 - 426203 - R 100 -12.6 -5.81412 | opp_overlap 426200 CTCAGGTAAAAAAAA TCCCGCCA AAGAG TGGCGGGA AACCTTATCGCATGG yahB 427302 - 426370 - | putative DNA-binding transcriptional regulator yahC 427891 - 427394 - | conserved hypothetical protein; putative inner membrane protein TERM 574 427535 - 427523 - G 71 -2.6 -5.00616 | CCCGCTGGCAAAAAA CAGC GTCAT GCCG AGAAAGCCTCCGGGA TERM 575 428045 - 428025 - H 70 -7.7 -3.66256 | CACACTGCGAAAAGA TTGTTGAAC ATC ATTCAACAA AAAGGCGAAATACGG yahD 428149 - 428754 + | putative protein with ankyrin domain TERM 576 429285 - 429270 - g 77 -3.2 -5.06089 | opp_overlap 429258 429272 429277, overlap 429258 429272 AAACGATAAAGAAAA TATCGC TTTG GCGATT GCTAATATGATGGGG yahE 428794 - 429657 + | hypothetical protein TERM 577 429742 - 429728 - g 90 -10 -4.43208 | ACACGTGCAAATAAA CTCGAC GGC GTCGAG CAGGCATTTGTGGCG yahF 429647 - 431194 + | putative enzyme with acyl-CoA domain yahG 431194 - 432612 + | hypothetical protein yahI 432708 - 433658 + | putative carbamate kinase TERM 578 434268 - 434252 - g 72 -5.1 -4.56597 | overlap 434253 TTCCGGCCTGAAAAA TCTGCAA AAT TTGCAGG CGGTGCTGGCGCGAC TERM 579 434594 - 434571 - g 70 -6 -4.18197 | gap 1, overlap 434576 ACGCCGCAGCTAAAA GGCA-AGCTGA CCA TCAGCCACGCC TTTGCGCTGGCTACC yahJ 433668 - 435059 + | putative deaminase/amidohydrolase with metallo-dependent hydrolase domain TERM 580 435119 - 435072 - T 87 -8.5 -4.42619 | gap 1, opp_overlap 435075 TAACATGGCAGAAAA TAACGCCTGGCAGAGTTCAGAG CGAAC CTCAAAGCTC-GCCAGGTGTTA TCAGTGTCGAAGTTG yjhP 435886 - 435140 - | putative methyltransferase from phage TERM 581 435433 - 435399 - G 81 -7 -4.65916 | opp_overlap 435402, overlap 435400 435402 GGGAGGGGAAGAAAA TCAGCCAACGCTTGCG CCC CGCAGGCATGGGCTAT CTCCTCGCTGGTGGG TERM 582 435432 - 435400 - G 76 -10.5 -3.39068 | opp_overlap 435402, overlap 435399 435402 GGAGGGGAAGAAAAT CAGCCAACGCTTGCG CCC CGCAGGCATGGGCTA TCTCCTCGCTGGTGG TERM 583 435430 - 435402 - G 74 -10.9 -3.2594 | opp_overlap 435402, overlap 435400 435399 AGGGGAAGAAAATCA GCCAACGCTTGCG CCC CGCAGGCATGGGC TATCTCCTCGCTGGT TERM 584 435402 - 435430 + g 71 -10.9 -2.95476 | opp_overlap 435402 435400 435399 AGGGGAAGAAAATCA GCCAACGCTTGCG CCC CGCAGGCATGGGC TATCTCCTCGCTGGT yjhX 436210 - 435896 - | conserved hypothetical protein; KpLE2 phage-like element TERM 585 437736 - 437756 + r 71 -9.7 -2.57931 | opp_overlap 437738, overlap 437735 437738 AATCCTTTGTGATTA CACGCTGAT TTC AGCAGCGTG CTTGTACACAGTCAA EFER_0427 438716 - 437733 - | Transaldolase A EFER_0428 439202 - 438744 - | putative Galactose-6-phosphate isomerase TERM 586 439491 - 439477 - g 71 -2.9 -4.7497 | GTCATGTAGCAAAAA TGTAA ATGGA TTACA CGAGCAGGAAGGGAA EFER_0429 439460 - 440950 + | putative tartrate transporter TERM 587 441401 - 441387 - g 81 -7 -4.60487 | opp_overlap 441387, overlap 441389 CATGAGCCCGAAAAA CGCCGC GGC GTGGCG GGCGATTTAGTGGTG EFER_0430 440952 - 442706 + | putative dihydroxyacetone kinase EFER_0431 442697 - 443488 + | putative triosephosphate isomerase EFER_0432 443485 - 444333 + | putative sugar phosphate isomerases/epimerases (COG1082) TERM 588 444356 - 444342 - gf 71 -2.8 -4.8622 | overlap 444345 CTGCTGAATTAAAAA CGATTA CCG TCATCG GTGCCGGCGGCAAAA EFER_0433 444290 - 445180 + | conserved hypothetical protein, putative COG0287 TERM 589 445187 - 445175 - f 72 -7.7 -3.74872 | opp_overlap 445183 445185 445186, overlap 445186 ATCGACCGCATTAAA CGTTG ATA CAACG CTCCGCTATCCCCCT TERM 590 445183 - 445218 + F 77 -4.7 -4.99035 | gap 1, opp_overlap 445175 445186 445187, overlap 445185 445186 CATTAAACGTTGATA CAAC-GCTCCGCTATC CCCCT GATGGCGGAGCAGATC TTTTTCTCTGCGTCA TERM 591 445185 - 445216 + F 73 -7.3 -4.11744 | gap 1, opp_overlap 445175 445186 445187, overlap 445183 445186 TTAAACGTTGATACA AC-GCTCCGCTATC CCCCT GATGGCGGAGCAGA TCTTTTTCTCTGCGT TERM 592 445214 - 445186 - f 83 -11 -3.51161 | opp_overlap 445185 445183 445186, overlap 445175 445187 TAAACGTTGATACAA CGCTCCGCTATC CCCCT GATGGCGGAGCA GATCTTTTTCTCTGC TERM 593 445186 - 445215 + F 79 -10.8 -3.05962 | gap 1, opp_overlap 445175 445186 445187, overlap 445185 445183 TAAACGTTGATACAA C-GCTCCGCTATC CCCCT GATGGCGGAGCAG ATCTTTTTCTCTGCG TERM 594 445213 - 445187 - f 88 -12.3 -2.70215 | opp_overlap 445186 445185 445183, overlap 445186 AAACGTTGATACAAC GCTCCGCTATC CCCCT GATGGCGGAGC AGATCTTTTTCTCTG TERM 595 445579 - 445604 + G 83 -10.3 -4.12397 | opp_overlap 445580, overlap 445580 445582 TAATGATGAAGATGA ACAGCGCCGCC AGGT GGCAGCGCTGG TTTCTAATTATCTCG TERM 596 445603 - 445580 - g 100 -16 -3.40565 | opp_overlap 445579 445580 445582 AATGATGAAGATGAA CAGCGCCGCC AGGT GGCAGCGCTG GTTTCTAATTATCTC TERM 597 445580 - 445603 + G 87 -13.8 -3.06715 | opp_overlap 445580, overlap 445579 445582 AATGATGAAGATGAA CAGCGCCGCC AGGT GGCAGCGCTG GTTTCTAATTATCTC TERM 598 445582 - 445601 + G 72 -10.6 -3.07891 | opp_overlap 445580, overlap 445580 445579 TGATGAAGATGAACA GCGCCGCC AGGT GGCAGCGC TGGTTTCTAATTATC EFER_0434 445265 - 446266 + | putative transcriptional regulator EFER_0435 446452 - 446595 + | hypothetical protein EFER_0436 446547 - 446879 + | hypothetical protein EFER_0437 447194 - 446952 - | Virulence protein msgA, DinI-like family TERM 599 447627 - 447608 - R 95 -7.8 -5.09204 | opp_overlap 447607 447608 ACAGCCCAAGAAAAA GGCTACGC TTTC GCGTATCC ATTTGATTTATTTTA EFER_0438 447853 - 447701 - | hypothetical protein TERM 600 447923 - 447948 + r 82 -10.3 -3.58037 | opp_overlap 447923 TGAAGGCACAAAAAA GCCCGCAGGGC TTGC GCCATGCAGGC TTTCAGGACTTCATC TERM 601 447948 - 447923 - R 100 -12.5 -5.31456 | opp_overlap 447923 TGAAGGCACAAAAAA GCCCGCAGGGC TTGC GCCATGCAGGC TTTCAGGACTTCATC EFER_0439 448296 - 448078 - | hypothetical protein TERM 602 448283 - 448301 + g 70 -11 -2.78018 | overlap 448279 ACCTCCGGCATTCTG CCGGTGTG ACT CATACCGG TGATTAATCCCCCGT TERM 603 448494 - 448477 - R 100 -12.7 -5.64274 | TCAGGGATAAAAAAA GACCGGC AGAT GCCGGTC AGGTGGGTCAGGCTG EFER_0440 450835 - 448502 - | phage DNA primase TERM 604 450015 - 450025 + g 87 -4.6 -5.252 | overlap 450010 TCACACGCATCTGCG GCTG CGG CGGC TTTTTTCTGGCCGTC TERM 605 450562 - 450587 + g 74 -10.3 -3.53444 | CCGGGTCAGCCGGGG GCAGGCTGCCG GTCA CGGCAGCCACC TTTGCGGCCGCATCG EFER_0441 451170 - 450850 - | conserved hypothetical protein from phage origin EFER_0442 451761 - 451306 - | conserved hypothetical protein from phage origin, putative ATPases with chaperone activity, ATP-binding subunit (COG0542) EFER_0443 452041 - 451754 - | Derepression protein,COG2213 cI 452447 - 452034 - | regulator protein cI TERM 606 452501 - 452487 - R 100 -7.8 -5.71712 | opp_overlap 452486 452493 TGCGACACAAAAAAA GACGCA TGG CGCGTC ATATGTCGCCGTTAG EFER_0445 452896 - 452630 - | conserved hypothetical protein of bacteriophage origin, putative COG3311, putative DNA binding TERM 607 453598 - 453587 - g 100 -5.8 -5.56568 | overlap 453588 453589 AGAGCAGGAAAAAAA TGCG CTGG CGCA GGCCGACGGAAACGA EFER_0446 453384 - 454184 + | Glycoprotein 3 (Capsid size determination protein) EFER_0447 454181 - 454681 + | Transactivation protein TERM 608 454818 - 454806 - g 90 -9.1 -4.51812 | TGTCAGAATAACAAA GCAGC ATG GCTGC AACGCAAAAATGAGC EFER_0448 454755 - 455327 + | Polarity suppression protein (Amber mutation-suppressing protein) TERM 609 455364 - 455388 + T 93 -12.2 -3.71148 | opp_overlap 455364, overlap 455381 455382 TTTTTACTGAAAAAA GCCATGCATC GATAA GGTGCATGGC TTTGCATGCGTTTTC TERM 610 455388 - 455364 - T 100 -10 -5.08824 | opp_overlap 455364 455381 455382 TTTTTACTGAAAAAA GCCATGCATC GATAA GGTGCATGGC TTTGCATGCGTTTTC TERM 611 455442 - 455423 - T 100 -12.8 -3.53811 | CTCATTTTCTGCAAA CCGCGCCA TTCC CGGCGCGG TCTGAGCGTGTCAGT TERM 612 455492 - 455473 - T 100 -11.4 -4.28361 | gap 1 GCAACTGCATTAAAA CCGCCCCGC AAA GCGGG-CGG GCGAGGCGGGGAAAG EFER_0449 457977 - 455527 - | conserved hypothetical protein from phage origin, putative COG0542, putative COG1220, putative coiled coil TERM 613 456751 - 456765 + g 71 -2.8 -4.79223 | ATCTAATTTTTCCGC CAACAT CTC AAGTTG TTTTTCCTCATATCG TERM 614 457291 - 457307 + g 72 -8.1 -3.86981 | overlap 457287 457305 TTCAATTTCATTGCT TTCAAGA GCA TCTTGAA TTATTAATTCTGATA TERM 615 457880 - 457900 + g 74 -6.1 -4.46073 | opp_overlap 457880 ATTTTGTTTATTATA TGATGCCTA GTC TGGGCTTCA TTTCTTATCTTGGCG int 459200 - 458001 - | phage integrase TERM 616 458043 - 458029 - G 72 -4.3 -4.72497 | GATTTATGAACAAAA GAACT CCACC AGTTC ATTAAATTCTTCCTT TERM 617 458701 - 458711 + g 70 -6.8 -4.02535 | CGAACAGTTTCAAGT GCTC CAC GAGC TTTAATTGGTTCTAA TERM 618 459274 - 459223 - R 90 -11.4 -3.59698 | gap 2 CTACCTCAGAGAGAA TTGGTATACGCTTTTAGGTATACA TCTTAC CGTATACCTAAA--CGTATACCAA TAATCACTGGATTTA TERM 619 459325 - 459350 + r 82 -10.3 -3.68853 | opp_overlap 459309 459325 TGCGGACACAAAAAA GCCCACAGGGC TTGT GCCATGCGGGC TTTCAGGATTTTTCC TERM 620 459350 - 459325 - R 100 -12.5 -5.36441 | opp_overlap 459325, overlap 459309 TGCGGACACAAAAAA GCCCACAGGGC TTGT GCCATGCGGGC TTTCAGGATTTTTCC EFER_0452 459548 - 459459 - | hypothetical protein TERM 621 459650 - 459665 + r 71 -3.2 -5.08011 | overlap 459652 GCTAAAGCGTAGTTT TCGTCG TTTG CGACTA TTTTTTGCGGCTTTT smpB 460446 - 459964 - | trans-translation protein TERM 622 460055 - 460067 + g 80 -5.5 -4.98531 | TGCTGTTTCTTACCT TTGGC GAC GCCGA TTTTTACTTTGCACC yfjG 460578 - 461054 + | hypothetical protein yfjF 461044 - 461334 + | hypothetical protein TERM 623 461346 - 461362 + T 100 -12.3 -5.10077 | opp_overlap 461346 ATAAACCAGAAAAAA GGTGCTC ATT GAGCACC TTTTTTAACGTCTTT TERM 624 461362 - 461346 - T 100 -12.3 -5.43621 | opp_overlap 461346 ATAAACCAGAAAAAA GGTGCTC ATT GAGCACC TTTTTTAACGTCTTT smpA 461735 - 461394 - | small membrane lipoprotein recN 463545 - 461884 - | recombination and repair protein TERM 625 463283 - 463297 + g 70 -4.2 -4.63218 | AGCAGGCATTCACGG CCATCT TCC AGTTGG TTTTCTTCCAGCCAG TERM 626 463385 - 463346 - G 79 -4.3 -4.96848 | gap 2, overlap 463347 TCTTTCAGAGAAAAA CGG-GCGCA-CAGATCTGC GCGA GCAGCTCCGGTACGCACCA TGTCGGCTTCAGCGC TERM 627 463540 - 463550 + g 70 -5.4 -4.39166 | GATGGTCAGTTGTGC CAAC ATA GTTG TTTTCCTGTATGAAA ppnK 465259 - 463631 - | inorganic polyphosphate/ATP-NAD kinase grpE 464174 - 465226 + | heat shock protein HSP70 cofactor TERM 628 465277 - 465246 - GT 93 -10.8 -4.15044 | opp_overlap 465249, overlap 465249 TGCTTTCGTAATAAA TCACGGCCCAGCAT GCGA ATGCCGGGCCGTTT TCGTTACTCCGCCAC TERM 629 465274 - 465249 - GT 100 -16.9 -3.10244 | opp_overlap 465249, overlap 465246 TTTCGTAATAAATCA CGGCCCAGCAT GCGA ATGCCGGGCCG TTTTCGTTACTCCGC TERM 630 465249 - 465274 + gT 100 -14.7 -4.45544 | opp_overlap 465249 465246 TTTCGTAATAAATCA CGGCCCAGCAT GCGA ATGCCGGGCCG TTTTCGTTACTCCGC yfjD 466477 - 465281 - | conserved hypothetical protein; putative inner membrane protein TERM 631 465394 - 465408 + g 78 -8.6 -4.18488 | opp_overlap 465384 CAATACGCACGCGAG TTCCTG CGA CAGGAA TTTCTTCCAGTACCT TERM 632 465946 - 465963 + g 79 -3.5 -5.03314 | gap 1, overlap 465949 CACTGCGCGGCACCA TGA-TGTC ATC GACAGTCA TTTTTTCCAGATCGA ypjD 467454 - 466588 - | conserved hypothetical protein; putative inner membrane protein TERM 633 467285 - 467299 + g 85 -2.7 -5.40072 | overlap 467284 GAAATAATAGCCATG CGCCG CCAGC CGCCG TTTTTTTGCAGCAGA ffh 467546 - 468907 + | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) TERM 634 468988 - 469020 + F 100 -9.2 -4.63218 | gap 1, opp_overlap 468990, overlap 468990 GGGCTTTTAATATGA CA-CCGGACTCCGTT CCTC GATGGGGTCCGGTTG TTTTATTCACACAAG TERM 635 468990 - 469017 + F 100 -12 -4.43307 | opp_overlap 468990, overlap 468988 GCTTTTAATATGACA CCGGACTCCGTT CCTC GATGGGGTCCGG TTGTTTTATTCACAC rpsP 469044 - 469292 + | 30S ribosomal subunit protein S16 rimM 469311 - 469859 + | 16S rRNA processing protein trmD 469890 - 470657 + | tRNA (guanine-1-)-methyltransferase rplS 470699 - 471046 + | 50S ribosomal subunit protein L19 TERM 636 471077 - 471098 + T 100 -11.5 -5.87996 | opp_overlap 471034 471032 471077 ACATCCTGTTAAGAA GGGCTGGCC AATT GGCTGGCCC TTTTTTTATTAATTA EFER_0467 471623 - 471249 - | hypothetical protein aroF 471839 - 472909 + | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible TERM 637 473746 - 473732 - g 71 -2.8 -4.77165 | CCTGGCAGAAGAAAA TGTTCA GCT TGAGCA ACTTCTGGCGCTTTC tyrA 472920 - 474041 + | fused chorismate mutase T ; prephenate dehydrogenase TERM 638 474078 - 474046 - T 70 -9.2 -2.82895 | gap 1, opp_overlap 474047 474048, overlap 474045 474049 GTCGCCAGTAATAAT CCAGTGCCGGGTG GCGTGTTT CACCCGGCAC-GA TTTCATTATGCCGGA TERM 639 474047 - 474078 + T 74 -7.9 -3.9941 | opp_overlap 474046 474045 474049, overlap 474048 TCGCCAGTAATAATC CAGTGCCGGGTGG CGTGTT TCACCCGGCACGA TTTCATTATGCCGGA TERM 640 474048 - 474077 + T 83 -11.4 -2.99325 | opp_overlap 474046 474045 474049, overlap 474047 CGCCAGTAATAATCC AGTGCCGGGTGG CGTGTT TCACCCGGCACG ATTTCATTATGCCGG TERM 641 474076 - 474049 - T 95 -14.2 -2.67428 | opp_overlap 474048 474047, overlap 474046 474045 GCCAGTAATAATCCA GTGCCGGGTG GCGTGTTT CACCCGGCAC GATTTCATTATGCCG pheA 475244 - 474084 - | fused chorismate mutase P ; prephenate dehydratase TERM 642 475275 - 475295 + r 89 -10.3 -4.03167 | opp_overlap 475275 GTTATCTATAAAAAA GGCCCCCCG ATT TGGGAGGCC TTATTGTTCGTCTTC TERM 643 475295 - 475275 - R 100 -11.8 -5.28176 | opp_overlap 475275 GTTATCTATAAAAAA GGCCCCCC GATTT GGGAGGCC TTATTGTTCGTCTTC pheL 475391 - 475344 - | pheA gene leader peptide TERM 644 475469 - 475454 - R 100 -11.8 -5.4505 | CCTGTCAACAAAAAA CGCGCC CGAA GGCGCG TTGGCGATACACTCA yfiA 475839 - 475495 - | cold shock protein associated with 30S ribosomal subunit TERM 645 475542 - 475575 + g 72 -6.7 -4.1822 | gap 1, overlap 475543 CGTCTTTCACCGATG TTGCGGCACGACGTGC TTC GC-CTTTGTGCTGCAG TTTATTGAGCTGCCG TERM 646 476070 - 476086 + r 70 -9.4 -2.75712 | opp_overlap 476070, overlap 476067 TTTGCATAAAAAAAA GGCAGC ACATG GCTGCC TGATTGAATAACTGA TERM 647 476086 - 476070 - R 100 -9.4 -5.93809 | opp_overlap 476067 476070 TTTGCATAAAAAAAA GGCAGC ACATG GCTGCC TGATTGAATAACTGA TERM 648 476126 - 476145 + r 75 -5.7 -4.66833 | GAATTACTACTGTTA GTGGCGA TAATCT TCGCTAC TTTTTCAGCTTGCGC yfiO 476844 - 476107 - | putative lipoprotein TERM 649 476944 - 476934 - H 75 -8.2 -3.8766 | GCACACTATATTAAA CGGC AAA GCCG TAAAACCCCAACGAT rluD 476979 - 477959 + | 23S rRNA pseudouridine synthase yfiH 477956 - 478687 + | hypothetical protein TERM 650 479621 - 479641 + G 72 -7.5 -3.86822 | opp_overlap 479611 479621 AACGATCTCGCCAAA CAGGAAGGC AAC GTCATCCTG TTTATCGACGAATTA clpB 478817 - 481390 + | protein disaggregation chaperone TERM 651 481421 - 481394 - f 91 -12.8 -2.77899 | opp_overlap 481399, overlap 481399 GCCGTCCAGTAATGA TAAAACGAGCCC TTTG GGGCTCGTTTTT GTCTATAAGTTAGAC TERM 652 481416 - 481399 - f 100 -12.7 -4.56607 | opp_overlap 481399, overlap 481394 CCAGTAATGATAAAA CGAGCCC TTTG GGGCTCG TTTTTGTCTATAAGT TERM 653 481399 - 481416 + F 100 -12.7 -5.04597 | opp_overlap 481399 481394 CCAGTAATGATAAAA CGAGCCC TTTG GGGCTCG TTTTTGTCTATAAGT TERM 654 483444 - 483431 - f 76 -6.7 -4.41177 | overlap 483435 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 655 483670 - 483646 - f 74 -8 -3.93061 | gap 1, opp_overlap 483653 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 656 486713 - 486692 - f 80 -8.7 -3.91196 | opp_overlap 486709 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TGAAACAGAATTTGC TERM 657 486860 - 486879 + F 100 -13.6 -4.63527 | opp_overlap 486860 TCAAATTAAGCAGAA GGCCATCC GTCA GGATGGCC TTTTTGCGCTGGTGC TERM 658 486879 - 486860 - f 100 -13.6 -3.58914 | opp_overlap 486860 TCAAATTAAGCAGAA GGCCATCC GTCA GGATGGCC TTTTTGCGCTGGTGC kgtP 487175 - 488473 + | alpha-ketoglutarate transporter yfiM 488742 - 488470 - | hypothetical protein TERM 659 488832 - 488816 - R 100 -9.4 -5.04249 | opp_overlap 488816 CCTCCAAAAAACAAA CCCCGT ACAGG ACGGGG TTGTGATTACAGGAT TERM 660 488816 - 488832 + r 76 -9.4 -3.51032 | opp_overlap 488816 CCTCCAAAAAACAAA CCCCGT ACAGG ACGGGG TTGTGATTACAGGAT pssA 490194 - 488839 - | phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) yfiQ 492968 - 490308 - | fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit TERM 661 492558 - 492516 - G 70 -5.5 -4.43208 | opp_overlap 492496 492495, overlap 492512 492553 AGACTGCGAAATAAA CGCCAGCTTGCCGCGTTTA ATCGG CACAGGCGAAAAGCTGGCA TTCAGGCCTTGCCAG yfiP 493698 - 493000 - | hypothetical protein TERM 662 493485 - 493501 + g 72 -10.1 -3.3782 | opp_overlap 493484 493482 TATCGGCAATCAGAC GCCCGGT GTT ACTGGGC TTCATTGGCTCGGTG TERM 663 493665 - 493640 - G 70 -3.9 -4.63218 | overlap 493643 CCGCGGGCAAGAAAA GGACGTGTTGC GCGC GCAATACGCTC GGCGCGTAACTGGAG TERM 664 493760 - 493740 - R 100 -14.7 -4.50976 | TCGCAGAGGAGAAAA CGGGGCACA AGA TGCGCCCCG GTAAGATTAAAGAGA trxC 494186 - 493767 - | thioredoxin 2 EFER_0492 494200 - 494403 + | conserved hypothetical protein, putative Z3866 protein yfiF 494393 - 495430 + | putative methyltransferase TERM 665 495437 - 495464 + T 76 -7.6 -4.20106 | opp_overlap 495427 495425 495438, overlap 495438 AAAGCCTGATAAATC AGCCGGGTGGAA ATTC TGCCATCCGGCG TTTTCCCTCAAATTT TERM 666 495438 - 495463 + T 79 -11.1 -3.11341 | opp_overlap 495425 495438, overlap 495437 AAGCCTGATAAATCA GCCGGGTGGAA ATTC TGCCATCCGGC GTTTTCCCTCAAATT ung 496167 - 495478 - | uracil-DNA-glycosylase TERM 667 495705 - 495688 - G 100 -9.1 -5.18726 | opp_overlap 495687 495690 TCCCCACAACAAAAA CACCACG CCTT CGCGGTG CTGGTTAATCAGGCT TERM 668 496328 - 496344 + H 95 -8 -5.24551 | AAAATCCATTTGCGA CCACAC TTGAT GTGTGG TTTTTGTTGATTTAA yfiD 496472 - 496855 + | pyruvate formate lyase subunit TERM 669 496878 - 496901 + T 100 -16.8 -6.32017 | opp_overlap 496878 GTAGCAAGTTACTAA GCGGAAGAGG GCGA CCTCTTCCGC TTTTTTTTGTTTATT TERM 670 496901 - 496878 - T 100 -16.8 -3.22884 | opp_overlap 496878 GTAGCAAGTTACTAA GCGGAAGAGG GCGA CCTCTTCCGC TTTTTTTTGTTTATT TERM 671 497330 - 497305 - T 100 -9.7 -4.82901 | opp_overlap 497303, overlap 497308 TTGTTGGGATAAAAA TAATGCCGGGC TTAA ACCCGGCATTG AGATTACTCTTCTGT TERM 672 497327 - 497308 - T 100 -11.4 -4.52873 | opp_overlap 497303, overlap 497305 TTGGGATAAAAATAA TGCCGGGC TTAA ACCCGGCA TTGAGATTACTCTTC srmB 498668 - 497334 - | ATP-dependent RNA helicase TERM 673 498231 - 498242 + g 72 -4.4 -4.67943 | AACCGCGCGGCAATC GAAG TTCT CTTC TTTTATGTATTGCAG TERM 674 498762 - 498775 + H 75 -5.9 -4.7254 | GGTATTGTTCTCACC CGGTG CTAT CGCCG TTTTTCCTGCAAGGT TERM 675 499505 - 499518 + G 91 -3.1 -5.56573 | gap 1 TCCGAAGCGTATACG GCGCTG ACC CAG-GC TTTTTATTTGTTTAT yfiC 498800 - 499537 + | putative S-adenosyl-L-methionine-dependent methyltransferase nadB 501144 - 499522 - | quinolinate synthase, L-aspartate oxidase (B protein) subunit TERM 676 500997 - 500977 - G 72 -8.2 -3.73775 | overlap 500980 GTCAGTTTCATCAAA CACGGCGG CAATT CCGCCCTG GGCATAAAATGTTGA TERM 677 501121 - 501143 + g 84 -3.5 -5.20222 | opp_overlap 501112 AATCAACACGTCACA TGAATGTTC AGGGA GAGTATTCA TTTTCTTTGTTTAAT rpoE 501552 - 502127 + | RNA polymerase, sigma 24 (sigma E) factor TERM 678 502434 - 502422 - g 78 -7.7 -4.43189 | opp_overlap 502412, overlap 502412 ATCAATGGCAGAAAA TGCCA TTC TGGCA GAAAGTACGTCCATG rseA 502160 - 502810 + | anti-sigma factor TERM 679 502869 - 502896 + G 77 -10.4 -3.61715 | GTTATTCTCTGCTAA CGCCTCGGCCAC TCCC GCGTCCGGGGCG TTATTACAGCAGATG rseB 502810 - 503766 + | anti-sigma factor rseC 503763 - 504242 + | RseC protein involved in reduction of the SoxR iron-sulfur cluster TERM 680 504235 - 504252 + F 100 -11.3 -4.32607 | CTTCGGAAGACGCGA GCCAGTG ATTT CACTGGC TTTGTTGCATTTTGC TERM 681 506141 - 506128 - g 74 -2.3 -5.07486 | overlap 506129 CAGCCGTAAGAAAAA GCTGC TGCA GAAGC AGAAAGAAGGTAAGA lepA 504440 - 506239 + | GTP-binding membrane protein TERM 682 506693 - 506677 - g 76 -9.5 -3.76373 | CCCGGAAGATCCAAA GCTTGAT TAC ATCAAGC GTGCGGTGGGTTTAC lepB 506255 - 507229 + | leader peptidase (signal peptidase I) TERM 683 507243 - 507275 + F 100 -21.5 -4.07877 | AATAGCTTATCTTCG TTCACGTTGTCGCCG TTA TGGCGACAACGTGAA TTATTTATGAGATAA rnc 507502 - 508182 + | RNase III TERM 684 508740 - 508750 + G 75 -6.8 -4.41548 | GATTACATCACCGAT CGCT CAC AGCG TTTTATGGCGTCTGA era 508179 - 509084 + | membrane-associated, 16S rRNA-binding GTPase TERM 685 509673 - 509663 - g 72 -6.8 -4.21275 | overlap 509671 509672 GGAAGGCAGTTAAAA GCGT TAA ACGC GCGGGAATTTCCTGA recO 509096 - 509824 + | gap repair protein pdxJ 509836 - 510567 + | pyridoxine 5'-phosphate synthase acpS 510567 - 510947 + | holo-[acyl-carrier-protein] synthase 1 TERM 686 510963 - 511015 + F 70 -5.6 -4.26881 | opp_overlap 510971 510977, overlap 510971 510977 AATAATATCGTTCTC TTTAAAAAGTAAAACCCCCGAACT GGTAA GGAACGGGGGTTTTACTTTACAAC TTTAATTTTGTGCAG TERM 687 510971 - 511007 + F 90 -11.6 -3.65084 | opp_overlap 510971 510977, overlap 510963 510977 CGTTCTCTTTAAAAA GTAAAACCCCCGAACT GGTAA GGAACGGGGGTTTTAC TTTACAACTTTAATT TERM 688 511007 - 510971 - f 100 -10.9 -4.56597 | opp_overlap 510963 510971 510977, overlap 510977 CGTTCTCTTTAAAAA GTAAAACCCCCGAAC TGGTAAG GAACGGGGGTTTTAC TTTACAACTTTAATT TERM 689 511001 - 510977 - f 71 -4.1 -4.77757 | opp_overlap 510971 510963 510977, overlap 510971 CTTTAAAAAGTAAAA CCCCCGAAC TGGTAAG GAACGGGGG TTTTACTTTACAACT EFER_0512 511206 - 511370 + | hypothetical protein TERM 690 511467 - 511496 + T 100 -13.5 -3.87346 | opp_overlap 511467 AGGAAACGTACTTAA GGCGCGTCAGGTT AACC AGCCAGGCGCGCC TTTAATAATTATAAT yfhL 511900 - 511640 - | ferredoxin (4Fe-4S cluster-containing protein) (fdx-like) yfhH 512804 - 511956 - | fused putative DNA-binding transcriptional regulator; putative isomerase TERM 691 512067 - 512099 + g 72 -7.7 -3.94877 | TAACATTCCCTGAGC GTGACAAGCAGAGAT TGC AGCACTGTTTGTCGC TTGTTCTTCGGCAAT TERM 692 513017 - 513039 + G 86 -6.2 -5.16572 | overlap 513020 513022 AGGAGTATGGTTTGG CAACTCACGA GCG TCGTGTGGTG TTTTTTGACTTAGAT TERM 693 513382 - 513397 + G 74 -6.1 -4.46112 | ACAGGATCTCCGCAG CCGCT GGTTGA AGCGG TTTATTTCGATACGC yfhB 513013 - 513648 + | hypothetical protein tadA 513673 - 514209 + | tRNA-specific adenosine deaminase yfhD 515624 - 514206 - | putative transglycosylase TERM 694 515743 - 515753 + H 73 -2.6 -5.1848 | opp_overlap 515743 CCGATGAACAGATAA TTAA TCT TTAA TTTTTTCAATTAGTT TERM 695 515856 - 515821 - H 70 -7.1 -3.81258 | gap 1, overlap 515855 GTAATAATAGTGAAA GGTTTACTCATAAATG AGCGG CATTT-TGCGTAAACC AGCGCCAGTTGGCAA TERM 696 515906 - 515917 + H 71 -4.4 -4.86731 | GCACGCGTTGCTAAT TCAC AATG GTGA TTTTATTTCCACGCA TERM 697 517216 - 517205 - g 74 -2.2 -5.14163 | overlap 517212 ACCTATGAAGAAAAA GTGA ACAG CCAC AACGGCGAAGAGCTG purL 516020 - 519907 + | phosphoribosylformyl-glycineamide synthetase TERM 698 520003 - 519986 - f 73 -9.1 -3.45023 | opp_overlap 519986 CGACCACTATCATAA GCTCCCA GCTC CGGGAGC TTTTTTGTGTCTGTA TERM 699 519986 - 520003 + F 100 -8.4 -5.4492 | opp_overlap 519986 CGACCACTATCATAA GCTCCC AGCTCC GGGAGC TTTTTTGTGTCTGTA TERM 700 520044 - 520061 + F 74 -7.7 -4.02021 | ATGGGTGGTTTACCG TGTCGCT TTTT GGCGACA TTTAATTGATTGATT TERM 701 520394 - 520424 + F 100 -16.3 -2.91681 | opp_overlap 520397 520401, overlap 520397 520401 CACCGCCTTATTCCA TAACAAAGCCGGG TCATT CCCGGCTTTGTTG TATCTGAACTTCCCC TERM 702 520421 - 520397 - f 100 -15.8 -3.32844 | opp_overlap 520394 520397 520401, overlap 520401 CGCCTTATTCCATAA CAAAGCCGGG TCATT CCCGGCTTTG TTGTATCTGAACTTC TERM 703 520397 - 520421 + F 100 -15.8 -3.60412 | opp_overlap 520397 520401, overlap 520394 520401 CGCCTTATTCCATAA CAAAGCCGGG TCATT CCCGGCTTTG TTGTATCTGAACTTC TERM 704 520401 - 520417 + F 100 -10.8 -4.42974 | opp_overlap 520401 520397, overlap 520397 520394 TTATTCCATAACAAA GCCGGG TCATT CCCGGC TTTGTTGTATCTGAA TERM 705 520417 - 520401 - f 100 -10.8 -4.32177 | opp_overlap 520397 520394 520401, overlap 520397 TTATTCCATAACAAA GCCGGG TCATT CCCGGC TTTGTTGTATCTGAA TERM 706 521279 - 521269 - g 71 -2.4 -4.90266 | overlap 521270 CTCATGAATTAAAAA CCCC GCT GGCG AGTATGCGCGAGGGC yfhK 520482 - 521909 + | putative sensory kinase in two-component system yfhG 522074 - 522787 + | hypothetical protein yfhA 522777 - 524111 + | putative DNA-binding response regulator in two-component system glnB 524172 - 524510 + | regulatory protein P-II for glutamine synthetase TERM 707 524535 - 524572 + F 88 -10.7 -3.78736 | overlap 524538 TTGTGGCGTCATTTC GGTTGTCTCTTGAGCAA ATCG TTGTTCAAGAGACATCA TTTACTGCCTCTCTC TERM 708 524538 - 524569 + F 100 -15.4 -2.97934 | overlap 524535 TGGCGTCATTTCGGT TGTCTCTTGAGCAA ATCG TTGTTCAAGAGACA TCATTTACTGCCTCT adk 524761 - 525405 + | adenylate kinase TERM 709 525416 - 525441 + F 83 -11.9 -2.86271 | overlap 525413 525413 GCTAATCAAGCCGCA GCAGATCTGCT TTCG GGCAGGTCTGC TCATTCTCCTCAGGC TERM 710 526466 - 526422 - g 86 -6.6 -5.00616 | gap 1, overlap 526424 526428 GCGGGCGGGAAAAAA TACGAATATATTCCGGCGC TTAATGCC GCACCGGAACATA-TCGAA ATGATGGCTAGTCTT TERM 711 526464 - 526424 - g 81 -9.2 -4.13561 | gap 1, overlap 526422 526428 GGGCGGGAAAAAATA CGAATATATTCCGGCGC TTAATGCC GCACCGGAACATA-TCG AAATGATGGCTAGTC TERM 712 526461 - 526428 - g 77 -9.7 -3.66995 | overlap 526424 526422 GGGAAAAAATACGAA TATATTCCGGCGC TTAATGCC GCACCGGAACATA TCGAAATGATGGCTA hemH 525537 - 526499 + | ferrochelatase aes 527490 - 526474 - | acetyl esterase TERM 713 526511 - 526535 + g 70 -5.7 -4.3129 | gap 1, overlap 526509 CTAAAGAACTGAGCG CCGTCG-CGA AGAGCA TCGTCGGCGG TTTTCATCATCCGTG TERM 714 528525 - 528504 - g 78 -7.9 -4.37198 | AAGCGAAACGCAAAA CCCAGCATC CGCT GCTGCCGGG CGCTATCGCGGAATT gsk 527594 - 528898 + | inosine/guanosine kinase TERM 715 529002 - 528962 - f 75 -10.3 -2.75826 | opp_overlap 528957 528969, overlap 528959 CAGCGGAAGATAGCA CGCCCTTGCCGGATGCGTT AGC ATCACATCCGGCTATGGTG TCAATGTCTTGACCC TERM 716 528969 - 528995 + F 77 -10.8 -2.87026 | opp_overlap 528962 528959, overlap 528957 AGATAGCACGCCCTT GCCGGATGCGTT AGC ATCACATCCGGC TATGGTGTCAATGTC EFER_0528 529054 - 529311 + | hypothetical protein TERM 717 529361 - 529330 - f 76 -8 -4.1891 | gap 1, opp_overlap 529330 529332, overlap 529332 TCTTGCTAATACAAA CACGCCGGGCACTGG CAG CCAATACC-GGCGTC TTTTTTTACTTCTGA TERM 718 529330 - 529361 + F 89 -3.6 -5.68023 | gap 1, opp_overlap 529330 529332, overlap 529332 TCTTGCTAATACAAA CACGCCGGGCACTGG CAG CCAATA-CCGGCGTC TTTTTTTACTTCTGA TERM 719 529332 - 529359 + F 74 -6.2 -4.46828 | gap 1, opp_overlap 529330 529332, overlap 529330 TTGCTAATACAAACA CGCCGGGCACTGG CAG CCAATA-CCGGCG TCTTTTTTTACTTCT TERM 720 529359 - 529332 - f 82 -10.6 -3.6944 | gap 1, opp_overlap 529332 529330, overlap 529330 TTGCTAATACAAACA CGCCGGGCACTGG CAG CCAATACC-GGCG TCTTTTTTTACTTCT TERM 721 529689 - 529722 + G 70 -6 -4.26076 | gap 2, opp_overlap 529689 529688, overlap 529693 ATACCACTGCAAAAC TGGCGGAGCAGGCCCG GGAA CGAGCCTGC-C-GCTA TTTTCATGAAGATGC EFER_0529 529382 - 529843 + | hypothetical protein TERM 722 529889 - 529899 + T 71 -8.2 -3.55622 | CGTCACCACTTCACC CGCC GGT GGCG TTTCCAGCAGTTCCA ybaL 531544 - 529868 - | putative monovalent cation:proton antiporter (CPA2 family) TERM 723 531774 - 531742 - R 75 -9.1 -3.62572 | overlap 531743 TATGACTATTGGAAA GGTGGCGGCCAAAGT TTA ACTTTGGCCGCAAGA AAATCACGCTTTATG TERM 724 531773 - 531743 - R 89 -12.6 -2.77222 | overlap 531742 ATGACTATTGGAAAG GTGGCGGCCAAAGT TTA ACTTTGGCCGCAAG AAAATCACGCTTTAT fsr 532986 - 531778 - | fosmidomycin efflux system, member of the major facilitator superfamily TERM 725 532095 - 532085 - G 72 -6.8 -4.18697 | AAAAGCAGGGTAAAA GGTG CAA CACC GAGGATAGAGCCCCA ushA 533161 - 534813 + | bifunctional UDP-sugar hydrolase and 5'-nucleotidase TERM 726 534823 - 534849 + T 100 -15.2 -3.9777 | opp_overlap 534818 534819 534839, overlap 534814 CAGTAATGAACCCCG TCGCGGCGTCAT GAT ATGACGCCGCCA TTTATGAATATTGAA EFER_0533 535354 - 534851 - | hypothetical protein EFER_0534 536151 - 535351 - | hypothetical protein TERM 727 535603 - 535581 - G 73 -12 -2.63357 | opp_overlap 535578 535601, overlap 535578 535580 AATCATCGTAAATAG CCACTGGCAG AGG CTGCCAGTCG GGGGTCGATTTGATA TERM 728 536015 - 535988 - G 73 -11.4 -2.8071 | gap 1, opp_overlap 535987 CCAACAACAAATTCA TCGAGCT-GTGCT TTC AGCACCAGCCCGA ATTCCTCACGATACC ybaK 536654 - 536175 - | hypothetical protein TERM 729 536313 - 536324 + g 84 -3.6 -5.24129 | GGGGGCGTCGATAAT CGTC GGCA GGCG TTTTTTCTGCCCCAG TERM 730 536831 - 536852 + r 91 -7.3 -5.40072 | overlap 536832 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 731 536832 - 536851 + r 88 -10.8 -3.83561 | overlap 536831 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA ybaP 537652 - 536858 - | hypothetical protein TERM 732 537454 - 537473 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG EFER_0537 537785 - 538087 + | putative RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system ybaQ 538123 - 538464 + | putative DNA-binding transcriptional regulator TERM 733 538562 - 538541 - T 80 -10.1 -3.59979 | overlap 538555 TGCGTCGATGCCAAA TGCGCCGCC CTAA AGCAGCGCA TCCGCAATGACTTAC copA 541082 - 538578 - | copper transporter TERM 734 541946 - 541967 + G 72 -5.8 -4.30909 | GCATATTTCCGTTTC CGCGCC TCCCAGTTCC GGCGCG TTCTTTTCCTGTATC TERM 735 542421 - 542450 + G 78 -5.7 -4.82667 | gap 1 GCAGCGCTTAACCTG GGT-TCACTGGCCA GTG TCGCCAGTGCCACC TTTTTGATCTGCTAC ybaT 541389 - 542678 + | putative nitrogen-containing metabolite transporter TERM 736 542690 - 542712 + F 100 -14.2 -2.97735 | CTGAACCCTTCCTTC GCGCAGTGTA AAA TGCACTGCGC TCTACTATTTCCCTG TERM 737 543203 - 543184 - g 87 -13.6 -3.05159 | overlap 543179 TTACAGGAAAGCATA TTGCGCGC CTTT GCGCGCAA CCCCGACGTCACCCA siiCA 543025 - 544380 + | outer membrane transport protein, type I secretion TERM 738 544918 - 544928 + G 72 -8.2 -3.72576 | GCGGTAGGTGGTGGC GCGC TTG GCGC TTTACTGGCAAGCGG TERM 739 545459 - 545441 - g 76 -7.4 -4.24002 | overlap 545445 CGCTAAACGGCAAAA CCTACACC ACC AGCGTAGG CGCTAACGGCGCGTG TERM 740 548551 - 548541 - g 70 -4.6 -4.45544 | GGTCACCAATCAAAA CGGC AAT ACCG GCAGCGGCACGCGGG TERM 741 550249 - 550229 - g 74 -7.5 -4.08216 | CGATTGGCGGGAAAA CCTACACCG CTA CCGTGCAGG GCAATTTTAGCTGGA TERM 742 551569 - 551531 - g 73 -11.7 -2.71364 | gap 1 TCACTGCGGCAATTA CCGATACGGCAGGCAACA GCGA TGATGCCAGCCGCA-CGG TCACCGTAAATCTCA TERM 743 551749 - 551727 - g 72 -10.6 -3.09718 | overlap 551724 551729 551747 GAACGGGCAAAATTA CACCGCTACC ACT GATAGCAGTG GCAACTGGAGCGCCA TERM 744 551830 - 551810 - g 71 -11.2 -2.93991 | GTGAAGCCAACTACA CGGTAACG GCGAG CGTTACCG ACACGGCAGGCAACA TERM 745 552043 - 552023 - g 83 -13.3 -3.01712 | opp_overlap 552022 CGCTGGGCGGCAACA CCTACACCG CTA CGGTGCAGG CTAATTTAAGCTGGA TERM 746 556930 - 556908 - g 74 -11.2 -3.21416 | CACGGTGACCATTAA CGCCAGCGTC ACT GACGCCGCCG GAAACAGCGGCAACG TERM 747 557049 - 557035 - g 73 -3.5 -4.73388 | overlap 557036 AACGCCGATGAAAAA GGCCA GCCGT TGACC ATCAGCGGTAGCAGT TERM 748 561619 - 561599 - g 70 -6.1 -4.24002 | overlap 561600 CCTTAAACGGTAAAA CCTACACCA CTA CGGTGCAGA CCGGTGGTAGCTGGA TERM 749 562168 - 562208 + G 72 -11.7 -2.52543 | opp_overlap 562166, overlap 562176 562178 ACCAGCGACACGACG CTTGCAGTGAGTGGTACGC TCG GCGCGCCGCTCTCTGCTGG TGAGTTCGCGCAAAT TERM 750 563359 - 563330 - g 76 -7.9 -4.18018 | gap 1, overlap 563352 CGGTGGTATCGAAAA CGGTGGTGGTCGAT ACG ATTAACC-CCACCG CCACGCCGACCATTG TERM 751 563464 - 563441 - g 70 -11 -2.80935 | opp_overlap 563441 563444, overlap 563444 AGGCCACTGACGACA CCACGCCGTT GCTC AACGGCGTGC TCTCTGCGCCGCTTG TERM 752 563441 - 563464 + G 71 -11 -2.87881 | opp_overlap 563441 563444, overlap 563444 AGGCCACTGACGACA CCACGCCGTT GCTC AACGGCGTGC TCTCTGCGCCGCTTG TERM 753 563461 - 563444 - g 73 -11.3 -2.66964 | opp_overlap 563441 563444, overlap 563441 CCACTGACGACACCA CGCCGTT GCTC AACGGCG TGCTCTCTGCGCCGC TERM 754 563444 - 563461 + G 73 -11.3 -2.69151 | opp_overlap 563444 563441, overlap 563441 CCACTGACGACACCA CGCCGTT GCTC AACGGCG TGCTCTCTGCGCCGC siiEA 544489 - 566157 + | adhesin for cattle intestine colonization TERM 755 566195 - 566234 + G 74 -6.4 -4.56597 | gap 1, overlap 566197 CCGTGGAAGCCTGGC TGGAGGCGATGATCGC-CG TGG CGCGCTATTACCGCCTCGA TTTTTCCCAGGAGAA TERM 756 566549 - 566516 - g 78 -5.1 -4.77867 | overlap 566517 ATATAGAAGACAAAA TCGTTGAACTGGCAC TACT GCGCCCGCTCAGCGC AATTCCCGATGCGCG TERM 757 566597 - 566579 - g 70 -11 -2.82516 | opp_overlap 566578 566577 566576 GGGTGGATGACTACA TTCGCCCG TAT CAGGCGAA CTGGTTCTGGAATCT TERM 758 567929 - 567939 + G 72 -8.2 -3.85698 | overlap 567922 CGTTAACCCTCAGCG GGGC GCT GCCC TTTGTGCAGAAGCAG TERM 759 568091 - 568075 - g 70 -10.1 -3.14132 | GTGCTGCTCGATGAA CCCAGCG CCT CGCTGGA CGAAATGGCGGAAGC siiBA 566161 - 568323 + | type I secretion membrane protein, ATP binding protein, protein export TERM 760 568959 - 568917 - g 70 -4.1 -4.68655 | gap 1 GAACTGGAAAACAAA CTTAGCGACGTGCGTACGCA ATAC TACGTACAGGCG-CGCGAAG AGTTAGCGAAAGCCA siiDA 568320 - 569495 + | RtxD/HlyD/CyaD protein of type I secretion system cueR 569492 - 569899 + | DNA-binding transcriptional activator of copper-responsive regulon genes ybbJ 570358 - 569900 - | conserved hypothetical protein; putative inner membrane protein ybbK 571272 - 570355 - | putative protease, membrane anchored TERM 761 571153 - 571176 + g 74 -9.7 -3.47078 | GAGCCCCGGCTGTAA CGTTTTGGT ATAGCG ACCAAAACG TTCTACTGTCCACTG ybbL 571418 - 572095 + | putative transporter subunit: ATP-binding component of ABC superfamily ybbM 572082 - 572861 + | putative permease of an ABC transporter ybbN 573895 - 573041 - | putative thioredoxin domain-containing protein ybbO 574765 - 573956 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain tesA 575381 - 574755 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 762 575051 - 575082 + gH 88 -12.4 -2.71011 | gap 1, opp_overlap 575081, overlap 575038 GGCGCAGCGTTTGCT CGGTTTGCTGTGGCT GAA AACCAC-GCAAACCG TCATTGCCGCCCAGT TERM 763 575609 - 575590 - gH 70 -9.2 -2.84134 | opp_overlap 575596, overlap 575589 ATATGGACGAAGAAG CGCGGGCA AAGT TGCGCGCG AAGCACGTAGGCTTT TERM 764 575596 - 575625 + GH 72 -4.3 -4.72386 | gap 1, opp_overlap 575590 575589 ACGAAGAAGCGCGGG CAAAG-TTGCGCGC GAA GCACGTAGGCTTTG TTTTTCAGTCATTTA ybbA 575349 - 576035 + | putative transporter subunit: ATP-binding component of ABC superfamily TERM 765 576512 - 576522 + G 77 -8.2 -4.11484 | opp_overlap 576512 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAACCCCTTCCA ybbP 576032 - 578446 + | putative ABC transporter permease EFER_0555 578683 - 578898 + | hypothetical protein EFER_0556 578996 - 579202 + | hypothetical protein TERM 766 579263 - 579275 + F 78 -4.1 -5.08601 | AACTATCTTTATTTT TGACT GAT GGTCA TTTTTCTTCCCCTGA TERM 767 579590 - 579609 + F 84 -3.6 -5.5353 | overlap 579578 AAGGATATTGTGAAT GTCTTTAT TGTG GTAAGGAC TTTTTTGTTGATATC EFER_0557 579671 - 579829 + | hypothetical protein EFER_0558 580256 - 580402 + | hypothetical protein TERM 768 580564 - 580526 - T 87 -6.1 -5.10033 | gap 1, overlap 580533 TTAAGAGAAAGAAAA TCTTAAACCGGATG-GTG ACAT CACACATCCGGCTAAACA ACCTTTATAAAGCAG TERM 769 580557 - 580533 - T 88 -10.8 -3.81111 | gap 1, overlap 580526 AAAGAAAATCTTAAA CCGGATG-GTG ACAT CACACATCCGG CTAAACAACCTTTAT ybbB 581689 - 580595 - | tRNA 2-selenouridine synthase, selenophosphate-dependent TERM 770 581069 - 581082 + g 72 -4.5 -4.70879 | CCACAGCCGTAGCTC CTGAC GGGC GTCGG TTTTTAGCATTTCGG TERM 771 582374 - 582384 + G 74 -2.4 -5.1615 | CTTTAGATGCGTGCT CCGG TCG CCCG TTTTTTGCCTGTTCC ylbF 581968 - 582621 + | hypothetical protein TERM 772 582727 - 582739 + G 71 -10.5 -2.83822 | overlap 582726 582703 CTGTTCCCGCGCTGG CGCGC CTG GCGCG TGCTTATCGACTGGC TERM 773 582949 - 582965 + G 82 -7.9 -4.56597 | CGCGCATTGAAGTTT CGCCTGA TGA TCCGGCG TTTTTGCAGCCAGAG ybcF 582618 - 583511 + | putative carbamate kinase purE 585228 - 584719 - | N5-carboxyaminoimidazole ribonucleotide mutase EFER_0565 585653 - 585324 - | hypothetical protein lpxH 586486 - 585764 - | UDP-2,3-diacylglucosamine pyrophosphatase TERM 774 586259 - 586245 - G 74 -6.4 -4.5442 | TTGCCAAGCAGAAAA TCACGG TTG CCATGA ATGAAATAACAGGGA TERM 775 586451 - 586416 - G 100 -12.7 -5.00616 | gap 1, opp_overlap 586425 TCCCCCGCTAAAAAA CGCAGAA-AACCGGCG GTGAT CGCCGGTTCTTCCACG CAGAGATGAAGATCT TERM 776 586425 - 586441 + g 85 -11.5 -3.61398 | opp_overlap 586416 AAAAAACGCAGAAAA CCGGCGG TGA TCGCCGG TTCTTCCACGCAGAG ppiB 586983 - 586489 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 777 586732 - 586750 + g 70 -4.4 -4.58283 | overlap 586734 CTGAGTACGGGCCAT TGCCAGCG TAC CGCGGGTG TTTTTCAGACCGTTG cysS 587157 - 588542 + | cysteinyl-tRNA synthetase TERM 778 588554 - 588577 + T 100 -16.8 -3.46602 | GTAATTGCGCTATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA ybcI 589099 - 588578 - | conserved hypothetical protein; putative inner membrane protein TERM 779 589198 - 589177 - R 100 -15.9 -3.95836 | AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GAAAGGGATCAGGCA ybcJ 589419 - 589207 - | putative RNA-binding protein folD 590287 - 589421 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 780 589452 - 589466 + g 72 -7.1 -4.18494 | opp_overlap 589450 589454 TCATGATATTCAACG CACGC CTGTA GCGTG TTTTCAATCAGCGTG TERM 781 589686 - 589703 + g 70 -4.1 -4.72272 | AACAGATCGGCATTT TCTACGT GATG ACGCAGA TTTTTAGTGAAGCGG TERM 782 590205 - 590176 - G 74 -9.9 -3.44527 | gap 1, opp_overlap 590197 TACCCACCAGCACAA CGGCCAGTCCG-GG TGC CCGCAGTCCGGCCG CAACACGCGCCTGAA TERM 783 590399 - 590385 - R 73 -8.6 -3.60818 | TTAAAATTTCCGAAA TGTTGC TCA GCAACA CCGGTTTAGTACGTG TERM 784 590454 - 590440 - R 85 -4.2 -5.47964 | AGAAAATAAGAAAAA TGAACG ATT CGTACA CTTAGCCAGCAAACA intD 591804 - 590641 - | putative integrase; DLP12 prophage yfdT 592336 - 592031 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage yfdS 592698 - 592336 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage yfdR 593225 - 592689 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 785 593337 - 593322 - R 86 -10.4 -3.86346 | opp_overlap 593322 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATGAAA TERM 786 593322 - 593337 + r 82 -10.4 -3.62096 | opp_overlap 593322 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATGAAA yfdQ 594177 - 593353 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage EFER_0577 594923 - 594243 - | hypothetical protein TERM 787 594680 - 594670 - Gg 70 -6.8 -4.02733 | CAAAACAGAGAAGAA CACC TGC GGTG ACTGCCGCCCGGATG TERM 788 594789 - 594748 - Gg 74 -6.5 -4.56597 | gap 1, overlap 594749 594779 TCTGTTTTGTAAAAA GGACGGTACCAGCCGGAAGC AAG GGTACAAACTGGTACCG-CC AGGACTACACACAGC EFER_0578 594417 - 594902 + | hypothetical protein TERM 789 595442 - 595456 + G 70 -7.2 -4.08216 | opp_overlap 595441 595437 595442 CTGGAGATCACAAAT TCATCA CTT TGATGA TTTTGACGAAAATGA EFER_0579 595074 - 595508 + | hypothetical protein from phage origin EFER_0580 595701 - 595480 - | conserved hypothetical protein from phage origin TERM 790 595747 - 595762 + H 100 -8.2 -5.5112 | opp_overlap 595747 TTGTTAAAGAGCTAA GCGTCC TGTA GGGCGC TTTTTTGTTGCTAAC EFER_0581 595922 - 596842 + | conserved hypothetical protein from phage origin EFER_0582 597511 - 596825 - | putative transcriptional regulator, Cro/CI family from phage origin EFER_0583 597647 - 597895 + | hypothetical protein TERM 791 598050 - 598080 + GF 71 -6.8 -4.11394 | opp_overlap 598055 ACAGAGAACGCATTA TTTAACCGCCTTCG TGC CGATGGCGATCAAA TTTTCCCGCTGGGAT TERM 792 598433 - 598404 - gf 70 -9.3 -2.76265 | gap 1, opp_overlap 598421, overlap 598403 598399 598406 ATTTCAGAAAGTAAT GACGCCCGCGAG TGTGCAG CTC-CGGGCGCC GTGGCGTGTCGTGAC ymfL 597813 - 598469 + | putative nucleic acid-binding protein; e14 prophage ymfM 598466 - 598804 + | conserved hypothetical protein; e14 prophage TERM 793 599180 - 599138 - g 95 -12.3 -4.09685 | gap 1, overlap 599153 TCTGACCCGTCAAAA TCTGACGCATCAAAATCTGA CCCG TCAAAATTTGATGCGTC-GA AATCTGGCAAAAAAG TERM 794 599210 - 599195 - g 81 -4.6 -5.03747 | overlap 599196 AAATCTGGCAAAAAA GCGGGT TTTC ACCCGT CAGAATCTGGCGGGG TERM 795 599303 - 599267 - g 95 -7.1 -5.36441 | overlap 599268 CCGTCAGATAAAAAA CCTTCTCGTCCGGACGC TTC GCAACCGGACACGCAGA CGGCTGAACAGGATT TERM 796 599302 - 599268 - g 72 -8.4 -3.81141 | overlap 599267 CGTCAGATAAAAAAC CTTCTCGTCCGGACGC TTC GCAACCGGACACGCAG ACGGCTGAACAGGAT EFER_0587 598814 - 599755 + | putative phage replication protein O yfdN 599752 - 600246 + | conserved hypothetical protein; CPS-53 (KpLE1) prophage EFER_0589 600213 - 600899 + | putative phage AdoMet-dependent methyltransferase EFER_0590 600896 - 601222 + | putative LexA repressor rusA 601219 - 601608 + | Crossover junction endodeoxyribonuclease TERM 797 601603 - 601589 - f 76 -7 -4.51097 | opp_overlap 601590, overlap 601590 GTAAGTACGAGAAAA CGGCGG GTG CAGCCG CCTGATTAAGAGGAG TERM 798 601802 - 601779 - g 73 -9.6 -3.62597 | overlap 601780 CTGAGCGTTTAATAA GCGAGTTGCA GATT TGCAACTCGG TCAATATAGAGCCAG TERM 799 601801 - 601780 - g 81 -13.1 -2.77344 | overlap 601779 TGAGCGTTTAATAAG CGAGTTGCA GATT TGCAACTCG GTCAATATAGAGCCA EFER_0592 601628 - 602425 + | conserved hypothetical protein from phage origin TERM 800 603107 - 603127 + G 72 -4.6 -4.66537 | overlap 603110 GCTGGCGCTGAAAGT GGATCCGG AGTCG CCGGAGTC TTTTATGTTACGCCC EFER_0593 602427 - 603422 + | hypothetical protein EFER_0594 603425 - 603802 + | putative antitermination protein Q from phage origin TERM 801 603843 - 603813 - T 72 -9.8 -2.89236 | opp_overlap 603833, overlap 603812 603808 AGTAATAAAATTAAG GCAGCAACATAG AGTTTAA CTTTGTTGCTGC GTAACAGATTTAATC EFER_0595 604599 - 603853 - | hypothetical protein froml phage origin TERM 802 604435 - 604474 + g 71 -9.2 -3.53924 | opp_overlap 604444, overlap 604432 604437 GTCATAGCGTGGGCC ATCAGGAGATGCTGCACA TATG TGAGCAGCAACTCCTGTC TTGATTGATTTATTG TERM 803 604437 - 604472 + g 100 -16.2 -3.32516 | opp_overlap 604444, overlap 604435 604432 CATAGCGTGGGCCAT CAGGAGATGCTGCACA TATG TGAGCAGCAACTCCTG TCTTGATTGATTTAT TERM 804 604695 - 604710 + H 81 -7.5 -4.64846 | opp_overlap 604695 GCCACACAGCTTAAA CCCGC CGTCGA GCGGG TTTTGTCGTTTCTGG TERM 805 604710 - 604695 - H 73 -8.2 -3.65425 | opp_overlap 604695 GCCACACAGCTTAAA CCCGCC GTCG AGCGGG TTTTGTCGTTTCTGG S 604866 - 605192 + | Holin r 605196 - 605672 + | Lysozyme (Lysis protein) (Muramidase) (Endolysin) EFER_0598 605656 - 606048 + | putative Rz lytic protein from phage origin, putative coiled-coil EFER_0599 606562 - 607008 + | hypothetical protein from phage origin , putative membrane protein TERM 806 607178 - 607157 - g 72 -7.1 -4.20696 | CCACGAACCCCAAAA GCCTGCCGC GTTC GCGGCTGCC GCCATACCACGACTG EFER_0600 607136 - 607486 + | putative endonuclease TERM 807 607921 - 607902 - g 70 -4.3 -4.56775 | overlap 607904 ACGTGCCGTGAAAAA TATTGCC AGACAG GGCAACA CCATCACCGGTGCAA TERM 808 607989 - 607978 - g 74 -2.2 -5.03314 | CTGACCGCCAAAAAA GAAC AGGA GTCC GAGATGAGCAGTACG EFER_0601 607603 - 608106 + | putative phage terminase, small subunit TERM 809 609098 - 609081 - g 77 -2.7 -5.07652 | gap 1 GTCTTTAAAACAAAA CACCTCAA TAT CTG-GGTG TCGGCGCGTTCGGCG EFER_0602 608103 - 609836 + | putative phage terminase TERM 810 609866 - 609893 + G 76 -7.6 -4.27617 | ATCATGCTGATTCTC GCGCCTCTGGTG GGCG TGCTGGGGGCGC TTTTGCTGGCGTATG TERM 811 609927 - 609937 + G 85 -8.2 -4.44667 | CCTGGCTGATTTATC CCCC GGC GGGG TTTGTTGTTGCCGGG ymfR 609848 - 610030 + | conserved hypothetical protein; e14 prophage EFER_0604 610030 - 611271 + | putative phage portal protein TERM 812 611440 - 611414 - gf 70 -5 -4.55287 | opp_overlap 611414 611438 TGGAGTGACAGAAAA GCGTTACCAGCG CTG CTCTGGCAGCAC CGCATGGATGAGCCC TERM 813 611563 - 611582 + GF 100 -13.6 -4.21607 | opp_overlap 611563 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG TERM 814 611582 - 611563 - gf 100 -13.6 -3.33261 | opp_overlap 611563 ACATGCACACATGAA GGCCGGTT CGTT AACCGGCC TTTCTATTGGGTACG TERM 815 611794 - 611760 - gf 100 -2.7 -5.80817 | overlap 611761 611766 CCGAACAGAAAAAAA TCGAAAGAGTCCTGC GTGAT GTCGGACTCTCCCGT ACCCAGGCCAAAGCA EFER_0605 611213 - 611899 + | putative phage pro-head protease TERM 816 612036 - 612025 - g 81 -5.8 -4.77438 | overlap 612031 ATTGAGCAGGAAAAA GGCA AACT TGCC GGGCAGGTGGAAACC EFER_0606 611914 - 613119 + | putative major capsid protein TERM 817 613125 - 613149 + F 100 -13.6 -3.30124 | gap 1, opp_overlap 613123, overlap 613127 AGCGGCGTAATCACT CAG-GGGCGCG GAAC CGCGCCCCCTG TTCTGACGGGTGAAG TERM 818 613127 - 613146 + F 100 -16.4 -2.5294 | opp_overlap 613123, overlap 613125 CGGCGTAATCACTCA GGGGCGCG GAAC CGCGCCCC CTGTTCTGACGGGTG EFER_0607 613169 - 613369 + | hypothetical protein EFER_0608 613372 - 613695 + | hypothetical protein EFER_0609 613692 - 614102 + | putative phage head-tail adaptor TERM 819 614136 - 614154 + G 78 -9.5 -3.89881 | GATGCGCTTTAACCG CGCCCGT GTCCG GCGGGCG TTTGTCACCATTGGT TERM 820 614355 - 614372 + G 75 -4.8 -4.86033 | opp_overlap 614355, overlap 614366 TAATGGTGAGGGAAA TCGCCG CATCAC CGGTGA TTTTTATCCGGCTTT EFER_0610 614077 - 614583 + | hypothetical protein TERM 821 614701 - 614666 - g 70 -3.9 -4.64766 | overlap 614667 GGCACAGTTCAAAAA TCTGCCGGAGGTC GGAAAGCTGA GACTCCCGGCAGC GTATGTGGTACCGGG TERM 822 614760 - 614743 - g 84 -4.1 -5.18371 | CTGGAGAAAACAAAA GCCAG ACCGACTA CTGGC AGGAGCTGAAAGAGG EFER_0611 614580 - 615140 + | hypothetical protein EFER_0612 615149 - 615319 + | hypothetical protein EFER_0613 615303 - 616799 + | Tail sheath protein TERM 823 616859 - 616837 - g 73 -11.3 -2.75577 | overlap 616834 616833 TTATTTCAAAATTGA CGGTCAGCA GCTAT CGCTGACCG GCGGCATTGAGGTGC EFER_0614 616799 - 617155 + | putative phage tail protein EFER_0615 617155 - 617424 + | hypothetical protein TERM 824 617457 - 617475 + F 100 -14.6 -3.22091 | GATCGCTTCTTTGAC TGCGCCAG TTA CTGGCGCA TTAATCCCTTCGAAT TERM 825 617998 - 617984 - g 88 -2.1 -5.55698 | gap 1, opp_overlap 617992, overlap 617986 617987 TACAACTGAAAAAAA CA-CCG GAAG CGGCTG CCGAGTTTGCTGCAA TERM 826 618552 - 618541 - g 72 -5.8 -4.34759 | overlap 618544 CAGAAGATGAATAAA CAGG CCAG CCTG AATAAACGTGTTCAG EFER_0616 617566 - 619398 + | phage tail tape measure protein TERM 827 619899 - 619886 - g 79 -3.9 -5.07652 | TTTTTGAAAATAAAA TGAAA AAGT TTTCA AAGGTACAGTCATTT EFER_0617 619480 - 619992 + | hypothetical protein from phage origin; putative exported protein TERM 828 620881 - 620867 - g 70 -5.6 -4.37534 | overlap 620868 620870 AAACGGACAGTAAAA CCACCG CCA CGGCGA CGCAGCAGCGTAACG EFER_0618 620083 - 621411 + | Tail/DNA circulation protein EFER_0619 621408 - 622487 + | Tail protein EFER_0620 622487 - 623035 + | putative baseplate assembly phage protein EFER_0621 623032 - 623460 + | putative tail protein TERM 829 623574 - 623596 + G 70 -10.6 -2.80236 | opp_overlap 623573, overlap 623573 ACGTGCGGGCAAAGG TGTATGCGGC GGC GCTGCATACG GTTTACGGTTACATT EFER_0622 623447 - 624505 + | putative baseplate J-like phage protein ymfQ 624496 - 625080 + | conserved hypothetical protein; e14 prophage TERM 830 625132 - 625106 - g 86 -9.4 -4.41353 | overlap 625098 GTATAGACACGAAAA CCGCGCAGAA GGATAAG TTCGGCGCGG GTAAAAACGGTTTTA TERM 831 625381 - 625371 - g 74 -2.4 -5.14563 | TGTGGCACGAAAAAA CCTG GAT CTGG GTACTGCGGCATTAA EFER_0624 625084 - 626013 + | hypothetical protein from phage origin EFER_0625 625989 - 626549 + | hypothetical protein from phage origin TERM 832 626596 - 626564 - T 100 -7 -5.63236 | gap 1 AGCGAAAAATAAAAA CCGCAGACACGCCGT ATGC AGGACGTA-CTGCGG ATTGGCTGGTGAACT TERM 833 626922 - 626944 + T 100 -12 -5.26907 | opp_overlap 626926, overlap 626926 TTTAAGTGTATAGTA AAAAGGCGGC ATT GCCGCCTTTG TTTTATTTTATCTTG TERM 834 626940 - 626926 - T 100 -12.8 -4.80882 | opp_overlap 626926 626922 AGTGTATAGTAAAAA GGCGGC ATT GCCGCC TTTGTTTTATTTTAT TERM 835 626926 - 626940 + T 100 -12.8 -5.06411 | opp_overlap 626926, overlap 626922 AGTGTATAGTAAAAA GGCGGC ATT GCCGCC TTTGTTTTATTTTAT EFER_0626 628074 - 626947 - | hypothetical protein TERM 836 628301 - 628269 - H 91 -8.5 -4.62783 | opp_overlap 628269 628267 TATTTATGTTAAAAA TTAGCGCAAGAAG ACAGAAA CATCTTGCGCCAA TGTTCTGTTGCAGTT TERM 837 628660 - 628679 + H 77 -3.6 -5.16841 | opp_overlap 628660 TATTCTCAGGAATAA TAGAGCAA TCTT TTTCTCTA TTTTTATTGATATAA EFER_0627 629487 - 629636 + | hypothetical protein TERM 838 629847 - 629817 - T 71 -4.1 -4.76963 | gap 1 GCAGATAAGATAAAA GACAGAGATT-CAT CAAT ATGCAAACCCTGTC GGTTAGCGAACCAAA yfdH 630860 - 629928 - | bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage yfdG 631219 - 630857 - | bactoprenol-linked glucose translocase (flippase) ; CPS-53 (KpLE1) prophage TERM 839 631312 - 631349 + r 74 -6.4 -4.4891 | opp_overlap 631320 631321, overlap 631320 GAGACAAAACTGAGA CACACAAAGCCTTGTA GGCCGA TGCAAGGCTTTATATG TTTTGTAATGGTGGG TERM 840 631330 - 631320 - R 71 -6.8 -4.17698 | opp_overlap 631312 631320, overlap 631321 ACTGAGACACACAAA GCCT TGT AGGC CGATGCAAGGCTTTA TERM 841 631320 - 631341 + r 74 -6.6 -4.36366 | opp_overlap 631320 631321, overlap 631312 ACTGAGACACACAAA GCCTTGTA GGCCGA TGCAAGGC TTTATATGTTTTGTA TERM 842 631567 - 631535 - R 100 -13.6 -5.7946 | TCCTTAATAAAAAAA TGGTGACCAACCTT ACAAG AAAGTCGGTCACCA TGAGAGGGCGCTTTA hmp 632781 - 631591 - | fused nitric oxide dioxygenase ; dihydropteridine reductase 2 TERM 843 632340 - 632356 + g 72 -5.7 -4.50661 | overlap 632335 632342 GAGTACCTTCCCAGC CACCGGC TTT GCTGGCG TTTTCGTTATAGATT TERM 844 632810 - 632828 + H 71 -9 -3.30124 | opp_overlap 632812, overlap 632800 TTTTGCATCTCAATT GATGTATT TCA AATACATC TTATAAAAAATAGCC TERM 845 633623 - 633607 - g 70 -5.1 -4.40333 | opp_overlap 633607 GCCAAAGAACACAAA CCGAAAA TGA TTATCGG TGGCTTCTCTGCATA glyA 633109 - 634362 + | serine hydroxymethyltransferase TERM 846 634411 - 634374 - T 100 -14.3 -3.87869 | opp_overlap 634378 634380 634385, overlap 634380 634385 GTAATCTCGCAGAAA GATATATTAAAGGCCGC AATT GCGGCCTTTAATGTTTC TAGCGGCGGTCGAGG TERM 847 634378 - 634407 + T 100 -15.9 -3.86015 | opp_overlap 634374 634380 634385, overlap 634380 634385 TCTCGCAGAAAGATA TATTAAAGGCCGC AATT GCGGCCTTTAATG TTTCTAGCGGCGGTC TERM 848 634405 - 634380 - T 100 -16.3 -3.23335 | opp_overlap 634378 634380 634385, overlap 634374 634385 TCGCAGAAAGATATA TTAAAGGCCGC AATT GCGGCCTTTAA TGTTTCTAGCGGCGG TERM 849 634380 - 634405 + T 100 -16.3 -3.51934 | opp_overlap 634380 634374 634385, overlap 634378 634385 TCGCAGAAAGATATA TTAAAGGCCGC AATT GCGGCCTTTAA TGTTTCTAGCGGCGG TERM 850 634400 - 634385 - T 100 -11.8 -3.94989 | opp_overlap 634380 634378 634385, overlap 634380 634374 GAAAGATATATTAAA GGCCGC AATT GCGGCC TTTAATGTTTCTAGC TERM 851 634385 - 634400 + T 100 -11.8 -4.04579 | opp_overlap 634385 634380 634374, overlap 634380 634378 GAAAGATATATTAAA GGCCGC AATT GCGGCC TTTAATGTTTCTAGC yphA 634905 - 634411 - | conserved hypothetical protein; putative inner membrane protein TERM 852 634757 - 634746 - G 71 -3 -4.74103 | overlap 634721 634753 TGGGGAACCCAAAAA TGAT GAAT ATCA ATATGATAGCTATAC TERM 853 635457 - 635477 + G 70 -4.7 -4.55491 | GGATTACGGGAGAGT GCGGTTG TGGGGGT CAATCGC TTTTGTCATTGGCTC hcaT 635062 - 636201 + | putative 3-phenylpropionic transporter csiE 637473 - 636193 - | Stationary phase-inducible protein CsiE yfhR 638520 - 637669 - | putative peptidase suhB 639457 - 638654 - | inositol monophosphatase TERM 854 639439 - 639411 - G 79 -12.3 -3.02166 | opp_overlap 639412, overlap 639408 TTGGCAATTAAATTA CCCGCCTTGCGCG CTG CGCGCACGGCGAT GTTCAGCATCGGATG TERM 855 639412 - 639438 + g 87 -13.6 -3.04263 | opp_overlap 639411 639408 TGGCAATTAAATTAC CCGCCTTGCGCG CTG CGCGCACGGCGA TGTTCAGCATCGGAT TERM 856 639897 - 639909 + G 78 -5.5 -4.77036 | opp_overlap 639895, overlap 639895 GAAGCGGCAAATACG CCGGT GGC ACTGG TTTTTGGTCGTGAGC yfhQ 639576 - 640316 + | putative methyltransferase TERM 857 640501 - 640454 - f 73 -8.6 -3.6715 | overlap 640456 GCACTGAAGGTTAAA TACCCGACTAAATCAGTCAAGT AAAT AGTTGACCAATTTACTCGGGAA TGTCAGACTTGACCC TERM 858 640499 - 640456 - f 83 -11.2 -3.4149 | overlap 640454 ACTGAAGGTTAAATA CCCGACTAAATCAGTCAAGT AAAT AGTTGACCAATTTACTCGGG AATGTCAGACTTGAC TERM 859 640563 - 640551 - f 91 -6.2 -5.55769 | TTTTACAATAAAAAA CCCC GGGCA GGGG CGAGTTTGAGGTGAA TERM 860 640690 - 640700 + G 75 -6.8 -4.38927 | TATTTCCGAACGTCA GGGA ATT TCCC TTTCTTATCTGGAAC iscR 640586 - 641074 + | DNA-binding transcriptional repressor iscS 641315 - 642529 + | cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent iscU 642557 - 642943 + | scaffold protein iscA 642960 - 643283 + | FeS cluster assembly protein TERM 861 643299 - 643325 + F 100 -8.7 -4.6951 | gap 1, opp_overlap 643299 TGCGCATACCGATAA CCCCAC-CGTGG TCAG CTGCGCGTGGGG TTTGTTTTACCTGAT hscB 643379 - 643894 + | DnaJ-like molecular chaperone specific for IscU TERM 862 644430 - 644418 - g 76 -9.1 -3.74693 | opp_overlap 644420 CGTCAGGGCACCAAA GACGC GGC GCGTC TGGCTGGGCTGCATG hscA 643911 - 645761 + | DnaK-like molecular chaperone specific for IscU fdx 645763 - 646098 + | [2Fe-2S] ferredoxin yfhJ 646110 - 646310 + | hypothetical protein TERM 863 646445 - 646464 + F 71 -7 -4.11216 | AGCGGAAAAATCCTG GGGCTGCC AACT GGAGGCCC TTTTACAAATAAGGA TERM 864 647615 - 647636 + G 70 -6.5 -4.16284 | gap 1, overlap 647615 GGCAGGTGCAAGTAC G-GCGGCGGG CTT CCTGTCGCAC TTTGTTGAGAACTAT pepB 646488 - 647771 + | aminopeptidase B sseB 647890 - 648666 + | rhodanase-like enzyme, sulfur transfer from thiosulfate TERM 865 648692 - 648669 - T 100 -12.4 -4.36127 | opp_overlap 648675, overlap 648671 TCGAATAATTTAAAA TATGCCGCCC CAAA GGGCGGCATT CGGGCTTACTTGCTG TERM 866 648690 - 648671 - T 100 -15 -3.77773 | opp_overlap 648675, overlap 648669 GAATAATTTAAAATA TGCCGCCC CAAA GGGCGGCA TTCGGGCTTACTTGC TERM 867 648741 - 648755 + T 100 -11.4 -4.15884 | ATCAGTAAATTGTTG CCGGAG GGA CTCCGG TTATTATTTACTTCG TERM 868 649116 - 649152 + T 91 -10.3 -4.08216 | overlap 649119 649126 CGCGAACCAGACCGG CAACAAATAACCGTC TGATTTT GGCGGTTTTTTGTTG TTTTAAGAAAAGTGA TERM 869 649126 - 649142 + T 86 -2.9 -5.77677 | overlap 649119 649116 ACCGGCAACAAATAA CCGTC TGATTTT GGCGG TTTTTTGTTGTTTTA TERM 870 649422 - 649379 - T 100 -20.6 -2.90194 | opp_overlap 649381 649386 649393, overlap 649382 649386 649393 AGGCCGCGAACCAGA CCAGCAATAAAAAACCGCCA AATT TGGCGGTTTTTTATTGCCTG TATAAAGCTTATTTC TERM 871 649381 - 649420 + T 100 -19.6 -2.90486 | opp_overlap 649379 649382 649386 649393, overlap 649386 649393 GCCGCGAACCAGACC AGCAATAAAAAACCGCCA AATT TGGCGGTTTTTTATTGCC TGTATAAAGCTTATT TERM 872 649419 - 649382 - T 100 -23.1 -2.69964 | opp_overlap 649381 649386 649393, overlap 649379 649386 649393 CCGCGAACCAGACCA GCAATAAAAAACCGCCA AATT TGGCGGTTTTTTATTGC CTGTATAAAGCTTAT TERM 873 649386 - 649415 + T 100 -16.7 -3.15999 | opp_overlap 649382 649379 649386 649393, overlap 649381 649393 GAACCAGACCAGCAA TAAAAAACCGCCA AATT TGGCGGTTTTTTA TTGCCTGTATAAAGC TERM 874 649415 - 649386 - T 100 -16.7 -3.26433 | opp_overlap 649386 649381 649393, overlap 649382 649379 649393 GAACCAGACCAGCAA TAAAAAACCGCCA AATT TGGCGGTTTTTTA TTGCCTGTATAAAGC TERM 875 649393 - 649408 + T 100 -10.4 -5.49234 | opp_overlap 649386 649382 649379 649393, overlap 649386 649381 ACCAGCAATAAAAAA CCGCCA AATT TGGCGG TTTTTTATTGCCTGT TERM 876 649408 - 649393 - T 100 -10.4 -5.52023 | opp_overlap 649393 649386 649381, overlap 649386 649382 649379 ACCAGCAATAAAAAA CCGCCA AATT TGGCGG TTTTTTATTGCCTGT sseA 650276 - 649431 - | 3-mercaptopyruvate sulfurtransferase TERM 877 650697 - 650674 - g 87 -4.6 -5.30575 | gap 1, overlap 650675 GAAAAACGGAAAAAA CTTGCTCAGCA AAG TGCTG-GAAAG TCGCTGGCTTTGCTC TERM 878 652493 - 652483 - g 71 -2.4 -5.0133 | CAGGGCGTGAAAAAA CCGG TTT CGGG CTTGCAGGTTCGTCT TERM 879 653169 - 653157 - g 77 -3.3 -5.14163 | overlap 653158 AGCCAGCAACAAAAA TGGTG AAA CACCG AAACAAGTCAATGTC TERM 880 654714 - 654727 + G 78 -5.3 -4.84527 | ACTACTTCCTGCCGA GCAAA ATAG TTTGC TTTTTACTCTGTCAG TERM 881 654925 - 654887 - g 78 -8.2 -4.17701 | GGGAGAAATCACAAA CCCGCAATCTGGATAG TGATCAG CTCTCCACATTGCAGG TGACTAACAATGGCG TERM 882 655186 - 655176 - g 72 -6.8 -4.19506 | overlap 655183 ACTGGAACTGGAAAA CCAG AAT CTGG CAAATGGTAGTGCCA yfhM 650482 - 655461 + | hypothetical protein TERM 883 655512 - 655483 - g 93 -12.2 -3.9941 | opp_overlap 655479 CGCCTGATAAGTAAA CGCGGCTGCT GGATTTCGTT AGCAGCCGCG CCCATTCTCCTGATT TERM 884 655613 - 655625 + G 81 -9.1 -4.12188 | TTGCTCATGATGGTA CGCCA CTG TGGCG TTTTGCCGATGCTGA TERM 885 656229 - 656216 - g 70 -6.7 -4.03234 | TGGCGCCGAGACAAA TGCCA CAAC TGGCA CCGCTGTTTTCGCGG TERM 886 656304 - 656276 - g 74 -6 -4.54477 | overlap 656268 656278 GCAAAAGCGACAAAA TCGTAACCACGC TGGAC GCAGGGTTACAA CGACAGTTGGAAGAG TERM 887 656486 - 656499 + G 70 -3.8 -4.65032 | overlap 656472 656490 TCCGATCACCAGGAT CGGT GCTTAA ACCG TTTGTTTATGCTTTG pbpC 655462 - 657774 + | fused transglycosylase ; transpeptidase ndk 657922 - 658353 + | multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase TERM 888 658385 - 658366 - f 74 -7.8 -3.95051 | TAATAATTTCATAAA TGCCGCGT GCAA ACGTGGCA TCCGTGCGCCAGAAT TERM 889 658414 - 658445 + F 100 -8.7 -5.04249 | gap 2, opp_overlap 658413 658410 658409, overlap 658417 ATTTGTACAATGCAG CGCCCCCGGACGAGC AGCC GCTCA-CCGGGG-CG TTTCTTTTTTCAACC TERM 890 658417 - 658443 + F 72 -10.1 -2.75795 | gap 1, opp_overlap 658413 658410 658409, overlap 658414 TGTACAATGCAGCGC CCCCGGACGAGC AGCC GCTCA-CCGGGG CGTTTCTTTTTTCAA yfgB 658503 - 659657 + | putative Fe-S containing enzyme TERM 891 659662 - 659699 + F 78 -7.1 -4.45083 | gap 1, opp_overlap 659663, overlap 659665 GTTCTGTCTGATAAA TGTTACGCCACGGT-TGT TTT ATATACCGTGGCGTATTG TTTTATGAATGTAGC TERM 892 659665 - 659696 + F 100 -13.2 -4.33785 | gap 1, opp_overlap 659663, overlap 659662 CTGTCTGATAAATGT TACGCCACGGT-TGT TTT ATATACCGTGGCGTA TTGTTTTATGAATGT yfgA 659948 - 660964 + | conserved hypothetical protein; putative HTH-type transcriptional regulator TERM 893 661989 - 661970 - g 76 -4.2 -4.89477 | overlap 661984 GCGGCAACAAGAAAA GCGGCCTT TATG AAGACGGC GTGCGCAAAGACCGT ispG 660991 - 662109 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 894 662147 - 662193 + F 77 -3.6 -5.0916 | CTTCCCGTGTATGAT TGAACCCGCATGGCTCCC GAAATATTGAG GGGCGCGTTGAGGGTTCA TTTTTATATTCAGAA hisS 662220 - 663509 + | histidyl tRNA synthetase TERM 895 663957 - 663947 - g 70 -6.8 -4.0098 | GTGCAACTCAAACAA GCAG ATG CTGC GCTAAAAACCCTCGA yfgM 663527 - 664147 + | hypothetical protein TERM 896 664557 - 664542 - g 77 -6.1 -4.65895 | GTGGGTAGCGAAAAA GCGCA GGTTTA TGCGC TGAATGCTGGCGACG yfgL 664158 - 665336 + | protein assembly complex, lipoprotein component TERM 897 665358 - 665388 + F 76 -10.5 -2.93708 | opp_overlap 665363, overlap 665363 TGGCTGTTAGTTTTA AAAAACGGCTCCT GGACA AGGGGCCGTTTTC CTGTTTTTAACAACG TERM 898 665363 - 665383 + F 100 -10.4 -4.60746 | opp_overlap 665363, overlap 665358 GTTAGTTTTAAAAAA CGGCTCCT GGACA AGGGGCCG TTTTCCTGTTTTTAA TERM 899 665383 - 665363 - f 100 -8.2 -5.03314 | opp_overlap 665363 665358 GTTAGTTTTAAAAAA CGGCTCCT GGACA AGGGGCCG TTTTCCTGTTTTTAA der 665455 - 666927 + | GTPase involved in ribosome synthesis and maintenance EFER_0662 666990 - 667205 + | hypothetical protein TERM 900 667265 - 667217 - f 84 -10.7 -3.71607 | opp_overlap 667219 667222 667251, overlap 667219 667222 667229 667251 TTAATATTATTTAAA TATATGATGAAATCATTTGTATT CAT AATATAAATGATTTCATCCTATT TTATTTGTTGAAGCG TERM 901 667219 - 667263 + F 100 -15.5 -5.09762 | opp_overlap 667217 667219 667222 667229 667251, overlap 667222 667251 AATATTATTTAAATA TATGATGAAATCATTTGTATT CAT AATATAAATGATTTCATCCTA TTTTATTTGTTGAAG TERM 902 667263 - 667219 - f 100 -13.3 -3.43511 | opp_overlap 667219 667222 667251, overlap 667217 667222 667229 667251 AATATTATTTAAATA TATGATGAAATCATTTGTATT CAT AATATAAATGATTTCATCCTA TTTTATTTGTTGAAG TERM 903 667222 - 667260 + F 100 -17.2 -3.08374 | opp_overlap 667219 667217 667222 667229 667251, overlap 667219 667251 ATTATTTAAATATAT GATGAAATCATTTGTATT CAT AATATAAATGATTTCATC CTATTTTATTTGTTG TERM 904 667260 - 667222 - f 100 -15 -2.56391 | opp_overlap 667222 667219 667251, overlap 667219 667217 667229 667251 ATTATTTAAATATAT GATGAAATCATTTGTATT CAT AATATAAATGATTTCATC CTATTTTATTTGTTG TERM 905 667448 - 667485 + G 100 -22.3 -3.04144 | opp_overlap 667448 TGTATTATGCTAACA TTTATCTCTGGAGCTGC TTTT GCGGCTCCAGAGATAAA TGTTGAGCATAAAGA TERM 906 667485 - 667448 - g 100 -20.1 -3.07043 | opp_overlap 667448 TGTATTATGCTAACA TTTATCTCTGGAGCTGC TTTT GCGGCTCCAGAGATAAA TGTTGAGCATAAAGA TERM 907 668380 - 668366 - g 81 -10 -3.87815 | overlap 668370 CTTGATCCTGACAAA GTGAGC GCG GCTCAC TCGCTCATGGGCAGC TERM 908 669139 - 669121 - g 81 -4.4 -5.11389 | ACAAGATAAAGAAAA GGGGACCG TTA CGCTCTCC AGTACGTTGCCCGGC EFER_0663 667397 - 669589 + | putative intimin ((attaching and effacing protein) or invasin protein (sivH-like) EFER_0664 669639 - 670637 + | conserved hypothetical protein; putative exported protein TERM 909 670636 - 670681 + F 100 -11.9 -4.4078 | opp_overlap 670629 670639 670647, overlap 670639 670647 670672 670674 670678 TTTACAAACACCACT AATGCGCACAACAGCATTCCC ATAC GGGAATGCTGTTTTCCGCCTG TTTTGCTTAGCGACG TERM 910 670678 - 670639 - f 100 -18 -2.58292 | opp_overlap 670636 670639 670647 670672 670674, overlap 670629 670647 ACAAACACCACTAAT GCGCACAACAGCATTCCC ATAC GGGAATGCTGTTTTCCGC CTGTTTTGCTTAGCG TERM 911 670639 - 670678 + F 100 -18 -2.88268 | opp_overlap 670639 670629 670647, overlap 670636 670647 670672 670674 ACAAACACCACTAAT GCGCACAACAGCATTCCC ATAC GGGAATGCTGTTTTCCGC CTGTTTTGCTTAGCG TERM 912 670670 - 670647 - f 100 -15.4 -3.33737 | opp_overlap 670639 670636 670647, overlap 670639 670629 CACTAATGCGCACAA CAGCATTCCC ATAC GGGAATGCTG TTTTCCGCCTGTTTT TERM 913 670647 - 670670 + F 100 -15.4 -4.16146 | opp_overlap 670647 670639 670629, overlap 670639 670636 CACTAATGCGCACAA CAGCATTCCC ATAC GGGAATGCTG TTTTCCGCCTGTTTT TERM 914 670672 - 670718 + F 100 -14.6 -5.02323 | opp_overlap 670639 670629, overlap 670639 670636 670674 670678 670704 ATACGGGAATGCTGT TTTCCGCCTGTTTTGCTTAGCG ACG CGTTAAGCAAAACAGGTTGATG TTTTGTTTATCATGC TERM 915 670674 - 670716 + F 100 -19.4 -4.12652 | opp_overlap 670639 670629, overlap 670639 670636 670672 670678 670704 ACGGGAATGCTGTTT TCCGCCTGTTTTGCTTAGCG ACG CGTTAAGCAAAACAGGTTGA TGTTTTGTTTATCAT TERM 916 670678 - 670712 + F 100 -21 -3.63516 | opp_overlap 670629, overlap 670636 670674 670672 670704 GAATGCTGTTTTCCG CCTGTTTTGCTTAGCG ACG CGTTAAGCAAAACAGG TTGATGTTTTGTTTA TERM 917 673692 - 673704 + G 70 -10.5 -2.8085 | opp_overlap 673674, overlap 673691 CGCACAGGCTATCGG CGGCG ATA CGCCG GTTTACGTCAGTTGC TERM 918 673826 - 673816 - g 74 -2.4 -5.09426 | GCGAAGCTGAAAAAA GGCG AAA CGCT ACGGGTTAAGGTAAC TERM 919 674452 - 674435 - g 75 -6.9 -4.35461 | GCAATACCATCAAAA CCGTCCA GGGC TGGCCGG TAGTCACGCGTTATT TERM 920 676370 - 676352 - g 70 -4.4 -4.58663 | AGGATGCGGCAAAAA CGGCCAGC AAT GGTGGTCG ACCGAGCGCCGTAGC TERM 921 678360 - 678350 - g 70 -4.6 -4.53303 | CACCTGGATATAAAA CGCC GTT GACG GTGACGCTGACCAAT TERM 922 678475 - 678461 - g 75 -11.4 -2.87211 | ATTTCTGGGGACATA TGGCGG ATA CCGCCA CTGTAAGTGGCAAGA EFER_0665 670747 - 678834 + | conserved hypothetical protein; putative exported protein; RatA homolog xseA 680256 - 678889 - | exonuclease VII, large subunit TERM 923 680045 - 680019 - G 70 -4.3 -4.45544 | opp_overlap 680032 TGGCACGAACTAAAA CCTGTTGCCCA TGCTG CGGGCGAAAGG TCACCCGGCGATTGC TERM 924 680696 - 680682 - g 74 -2.8 -5.00616 | CGCCGCGTGAAAAAA CACG AATCTGG CGTG GTAACCGATCCGCAG TERM 925 680966 - 680952 - g 73 -4.2 -4.79667 | overlap 680943 AAAATGCACGAAAAA CGCGTT GAA AAAGCG CTGGTGGTTGATGAT guaB 680418 - 681884 + | IMP dehydrogenase TERM 926 681891 - 681913 + F 100 -14.9 -4.33674 | GGCTCCTGATTCTCT TCGCCCGAC TTCAT GTCGGGCGA TTTATATTATCTGTT guaA 681953 - 683530 + | GMP synthetase (glutamine aminotransferase) EFER_0669 684244 - 683618 - | hypothetical protein TERM 927 684300 - 684323 + r 100 -15.4 -3.21695 | opp_overlap 684300, overlap 684295 TTTTTTAATGAAAAA GCCCAAACTG CAGG CAGTTTGGGC TTGACTTAATCATAC TERM 928 684323 - 684300 - R 100 -15.4 -4.8622 | opp_overlap 684300 684295 TTTTTTAATGAAAAA GCCCAAACTG CAGG CAGTTTGGGC TTGACTTAATCATAC yfgI 684898 - 684350 - | hypothetical protein TERM 929 684543 - 684556 + g 82 -2.3 -5.38958 | ACTCGCGCTTCTTCC CTTGC CAGA GCCAG TTTTTGTTTCTGGAT TERM 930 684664 - 684681 + g 90 -11.3 -3.87914 | overlap 684666 GACGAGCCTGGCGTT CTGCTGC CGCA GCAGCAG CTTTTTTATTCGCTG TERM 931 684666 - 684682 + g 100 -7.9 -5.4833 | overlap 684664 CGAGCCTGGCGTTCT GCTGCCG CAG CAGCAGC TTTTTTATTCGCTGC yfgH 685477 - 684914 - | putative outer membrane lipoprotein TERM 932 685573 - 685593 + H 71 -4.1 -4.81083 | opp_overlap 685577, overlap 685575 685577 TAATATATGATTTAT TATATACAT TTA ATGTATAAA TTTTTCCTAATTAAC EFER_0672 685619 - 685912 + | hypothetical protein TERM 933 686750 - 686760 + G 77 -6.8 -4.44797 | CGCTCCAGCCAGATT GGCA TAA TGCC TTTTAATATTAGTAC TERM 934 688013 - 687997 - g 71 -9.4 -3.54424 | GTTTATGGCCGTAAA CCGGGA GAAGA TCCCGG CGCAGCGCTATGCGA EFER_0673 686282 - 688531 + | conserved hypothetical protein; putative inner membrane protein TERM 935 688575 - 688550 - T 72 -9.8 -2.79983 | gap 1, opp_overlap 688551 688552, overlap 688549 AAAACGCGTAATAAG GCTGGCCCGAT GTGAA ATCGGGCCA-C TTGTATCTCTTATGC TERM 936 688551 - 688575 + T 80 -10 -3.71149 | opp_overlap 688550 688549, overlap 688552 AAACGCGTAATAAGG CTGGCCCGAT GTGAA ATCGGGCCAC TTGTATCTCTTATGC TERM 937 688552 - 688574 + T 93 -13.5 -2.81966 | opp_overlap 688550 688549, overlap 688551 AACGCGTAATAAGGC TGGCCCGAT GTGAA ATCGGGCCA CTTGTATCTCTTATG ppx 690221 - 688602 - | exopolyphosphatase TERM 938 688760 - 688794 + gT 70 -7.9 -3.61398 | gap 1 CATCTGTAATTAGTG TCAGTGT-AGGCGGAG TGGT CGTCGCCTGACGCTGA TTATTCAGCAACACA ppk 692205 - 690139 - | polyphosphate kinase, component of RNA degradosome TERM 939 690289 - 690279 - GR 73 -4 -4.86731 | TGTCGCTAAACAAAA TATC AAT GATA TCCAGAACACGCTGC TERM 940 691375 - 691355 - GR 71 -8.4 -3.42985 | ACAATAGAGTCATAA CGAGAAAT GGTTA ATTTCTCG CGCAGCACTTCGACT purN 693047 - 692406 - | phosphoribosylglycinamide formyltransferase 1 TERM 941 692653 - 692635 - G 70 -5.2 -4.37886 | opp_overlap 692621 692636, overlap 692636 TCATCTGTGACAAAA TGCACGGA TGT TCCATGCT CTTTATCACCATTTT TERM 942 692918 - 692934 + g 76 -9.4 -3.72027 | CCCTGGCACGTTCAA GGCCGA ACGCG TCGGCC TTATTGCTGAAGACT TERM 943 692979 - 693006 + g 83 -12.2 -3.4052 | gap 1 TTTGATTTTATTGAC TTTGCAGGC-ATC GAT GATTGCCTGCAAA TTGCTTCCGTTGCCG purM 694081 - 693044 - | phosphoribosylaminoimidazole synthetase TERM 944 693974 - 693984 + g 71 -2.4 -4.93877 | opp_overlap 693951 ACCACCCATGACTTC CGGG CGG CGCG TTTTCTTTACTACGC upp 694315 - 694941 + | uracil phosphoribosyltransferase TERM 945 694960 - 694978 + F 100 -11 -5.81412 | ATAAATTCTTTCTTA GCCGACTT TAA GAGTCGGC TTTTTTTTGACTAAA uraA 695027 - 696316 + | uracil transporter TERM 946 696351 - 696318 - f 89 -10.4 -4.00124 | gap 1, opp_overlap 696325, overlap 696325 CACCGCAGAAGTAAA GTAGCAACCGGGCAG TTCCG CTGCCCGGTT-CTAA CATCATGTAATTCTG TERM 947 696325 - 696345 + F 100 -14.7 -3.3452 | opp_overlap 696318 696325 GAAGTAAAGTAGCAA CCGGGCAGT TCC GCTGCCCGG TTCTAACATCATGTA TERM 948 696345 - 696325 - f 100 -14 -3.35298 | opp_overlap 696325, overlap 696318 GAAGTAAAGTAGCAA CCGGGCAG TTCCG CTGCCCGG TTCTAACATCATGTA hda 696388 - 697113 + | ATPase regulatory factor involved in DnaA inactivation TERM 949 697109 - 697141 + T 75 -5.7 -4.67982 | gap 2, opp_overlap 697115, overlap 697115 AAGAGATCCTGAAAC TGTAAACGCCGTAGG GTTAG CC-ACGGCG-TTACG TTTTATTAGCTGACA TERM 950 697136 - 697115 - T 78 -9.4 -3.71649 | opp_overlap 697115 697109 TCCTGAAACTGTAAA CGCCGTAG GGTTAG CCACGGCG TTACGTTTTATTAGC yfgD 697506 - 697147 - | putative oxidoreductase TERM 951 697428 - 697451 + g 73 -9 -3.57615 | CTTCTGCGTCCACGC CATTTTCCTT CAGC AAGGAAAGTG TTTCACGGCTCTTGG TERM 952 697481 - 697496 + g 73 -4 -4.84262 | overlap 697482 GAGCAACGAGGGTTA TGGTAA ATTT TTACCG TTTTGTTCATTGTTC yfgC 698990 - 697527 - | putative peptidase TERM 953 699281 - 699294 + G 72 -4.5 -4.70511 | overlap 699274 GCTGGTTATCCTGGT TGCCG GATT CGGTA TTATTTTCTTTTTCA perM 699204 - 700265 + | putative permease TERM 954 700270 - 700298 + T 88 -9.5 -4.37658 | overlap 700271 700272 GCGACAGTTAATCTC AGGGCCCGGTGAA TGT TTCATCGGGCCAA TTTTCTAAAGCACTT TERM 955 700271 - 700297 + T 95 -13 -3.22113 | overlap 700270 700272 CGACAGTTAATCTCA GGGCCCGGTGAA TGT TTCATCGGGCCA ATTTTCTAAAGCACT TERM 956 700272 - 700296 + T 100 -16.5 -2.52946 | overlap 700271 700270 GACAGTTAATCTCAG GGCCCGGTGAA TGT TTCATCGGGCC AATTTTCTAAAGCAC EFER_0684 702315 - 700303 - | Hydrogenase-4 transcriptional activator TERM 957 702164 - 702146 - G 76 -7.4 -4.25104 | overlap 702159 CGGCTTCCAGGAAAA TGCAGTTC AAT GAGCTGCA CCGCGCTAAAAGGCG TERM 958 702278 - 702306 + g 77 -7.3 -4.49981 | overlap 702280 GCCATCATGTTATCT TCCGGCGGGGCGA GCA TCGCCTCGTCAAA TTTTGTCATCGTATC EFER_0685 702740 - 702312 - | putative processing element hydrogenase 4 hyfI 703539 - 702733 - | hydrogenase 4, Fe-S subunit TERM 959 703191 - 703238 + gr 79 -11.2 -3.14564 | gap 1, overlap 703190 CACAAATTTTATGAT CGGGGGCTGATTCGTAAGCCCGC AAT GCAGGCATACGCATC-GCTCGCG TTACTGCGCCAGTAA EFER_0687 704045 - 703497 - | Hydrogenase-4 component H hyfG 705770 - 704055 - | hydrogenase 4, subunit hyfF 707340 - 705760 - | hydrogenase 4, membrane subunit TERM 960 706586 - 706563 - G 70 -5.2 -4.30978 | gap 1 CGCAATTCAGTAAAA CGGCAGAGAGC AGG GCACTC-ACCG GGCTTGGGGCTTCAC hyfE 707995 - 707345 - | hydrogenase 4, membrane subunit hyfD 709455 - 708007 - | hydrogenase 4, membrane subunit hyfC 710409 - 709462 - | hydrogenase 4, membrane subunit EFER_0693 712495 - 710420 - | putative hydrogenase 4, membrane subunit EFER_0694 713058 - 712441 - | putative hydrogenase 4, 4Fe-4S subunit TERM 961 712500 - 712512 + gr 80 -5.5 -4.95957 | CTGCCAGACACGTGG CGGCA AGA TGCTG TTTTTGCTTCATTTG TERM 962 713095 - 713079 - R 84 -5.1 -5.27335 | CTCCTTAAATAAAAA CAAAACG TTA CGCCTTG CTATGCATAAAGGAT bcp 713774 - 713304 - | thiol peroxidase, thioredoxin-dependent gcvR 714346 - 713774 - | DNA-binding transcriptional repressor, regulatory protein accessory to GcvA TERM 963 714447 - 714399 - H 93 -2.6 -6.04378 | gap 2, overlap 714410 AAAGCATAAAAAAAA CTGGC-ATACAA-CAAGCAACAGG TCT CTCGTCACTTGCTTTTATTGCCAG ACCAAACGTACCATT dapA 714493 - 715371 + | dihydrodipicolinate synthase TERM 964 715800 - 715771 - g 72 -4.4 -4.62783 | gap 1, overlap 715774 GATTCAGGCGAAAAA CTA-CACCATCAC CAAAC GTGATGATGCCAG CCAGACCCTGACCAC nlpB 715388 - 716422 + | lipoprotein TERM 965 716453 - 716426 - f 71 -4 -4.90266 | opp_overlap 716430, overlap 716428 716430 TTTAGCAAGTAAAAA TACAGGGCTGGA GTCA TCCGGCCCTTTT TTCTGATATGATACG TERM 966 716449 - 716430 - f 78 -9.2 -3.61182 | opp_overlap 716430, overlap 716428 716426 GCAAGTAAAAATACA GGGCTGGA GTCA TCCGGCCC TTTTTTCTGATATGA TERM 967 716430 - 716449 + F 100 -11.4 -5.34555 | opp_overlap 716430 716428 716426 GCAAGTAAAAATACA GGGCTGGA GTCA TCCGGCCC TTTTTTCTGATATGA TERM 968 717283 - 717247 - g 72 -5.7 -4.55295 | opp_overlap 717260, overlap 717243 717249 TGTGGGACAAAGAAA CGCTGGAGAAAATGGAC AAA GACCGTTTCCGCCAGAG CCTCGGTGGCCTGAT purC 716634 - 717347 + | phosphoribosylaminoimidazole-succinocarboxamide synthetase ypfJ 717515 - 718378 + | hypothetical protein TERM 969 718782 - 718793 + G 72 -5.8 -4.37092 | TTGCCCTGACCCTAT TGCG ACGC CGCA TTTTGTCCGGCACCT TERM 970 720259 - 720249 - g 79 -4.6 -4.96848 | TCGTTTACAGAAAAA CGCC AGT GACG CGCAGTTATGTACCA ypfI 718393 - 720408 + | putative hydrolase ypfH 720482 - 721180 + | putative hydrolase TERM 971 721232 - 721267 + T 100 -13.2 -3.26428 | overlap 721227 GTCGCATCAGGCATC ATGGCCGGATGCGGCG TTAA CGCCTGATCCGGCCAC TTAGCTTACTTCTTC ypfN 721473 - 721273 - | hypothetical protein dapE 722628 - 721501 - | N-succinyl-diaminopimelate deacylase yffB 722988 - 722632 - | hypothetical protein TERM 972 723505 - 723526 + r 91 -7.3 -5.39681 | opp_overlap 723505 CATAAAGATGGAAAA GGCGACT CATTGGCA AGTCGCC TTTTTGTTTGATTAT TERM 973 723526 - 723505 - R 86 -8.7 -4.33907 | opp_overlap 723505 CATAAAGATGGAAAA GGCGACTCA TTGG CAAGTCGCC TTTTTGTTTGATTAT acrD 726651 - 723538 - | aminoglycoside/multidrug efflux system TERM 974 724269 - 724259 - G 85 -6.8 -4.7416 | GCAAAAGCGGAAAAA GGCA CCA TGCC GCCATCTTTATTGCG TERM 975 725045 - 725028 - G 77 -8.4 -4.011 | GTAACAGGTAAATAA GCAGCC AGCGCA GGCTGC GATGAAGAATTTTTG narQ 728482 - 726770 - | sensory histidine kinase in two-component regulatory system with NarP (NarL) TERM 976 728458 - 728435 - G 100 -5.2 -5.84432 | gap 1, overlap 728436 GACAATATAAAAAAA GGCCCTGGCCA GAC TGGCC-GAGAC GGGACGTTTAACGAT TERM 977 728458 - 728436 - G 74 -7.6 -4.08219 | overlap 728435 ACAATATAAAAAAAG GCCCTGGCCA GAC TGGCCGAGAC GGGACGTTTAACGAT TERM 978 729113 - 729103 - g 70 -6.8 -4.07568 | opp_overlap 729110 CGCCTGTGTGGAAAA CTGC CCG GCAG ATGCACTGCAACTGG TERM 979 729175 - 729163 - g 82 -7.7 -4.56597 | CGGGTTGGCGAAAAA TCGCA GGC TGCGA ACGGCACGGCAAGAA TERM 980 730250 - 730240 - g 72 -4.6 -4.6856 | opp_overlap 730241, overlap 730241 GAAAGAGGTGAAAAA CGCC CGC GACG AAGGGGCTAATTTCG aegA 728567 - 730675 + | fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit TERM 981 730742 - 730693 - f 77 -8.5 -4.07124 | opp_overlap 730694, overlap 730694 CACTACGCAGACAAA CCCAACTTCGCGGCGTAAGATGA TGAG TCTTCTTATGCCGTGGAGCTGGT ATGTCACAACAAATT TERM 982 730694 - 730741 + F 100 -16.4 -2.87211 | opp_overlap 730693 730694 ACTACGCAGACAAAC CCAACTTCGCGGCGTAAGATGA TGAG TCTTCTTATGCCGTGGAGCTGG TATGTCACAACAAAT TERM 983 730741 - 730694 - f 86 -12 -3.03792 | opp_overlap 730694, overlap 730693 ACTACGCAGACAAAC CCAACTTCGCGGCGTAAGATGA TGAG TCTTCTTATGCCGTGGAGCTGG TATGTCACAACAAAT TERM 984 730789 - 730777 - g 71 -2.7 -4.82128 | TCATCAAAGATAAAA TTCTC TCC GAAAA CTATTTCACCCTGCA yffH 730743 - 731318 + | putative NUDIX hydrolase TERM 985 732237 - 732217 - g 70 -3.8 -4.65895 | opp_overlap 732232, overlap 732218 TGTTTCACGGAAAAA GCCGCTCG CCTCC CGCGCGGT ACGCCTGCGTTTACC TERM 986 732374 - 732396 + G 90 -9.9 -4.371 | gap 1, overlap 732391 TGTGGTATTCAGACG CGCTGG-CGT TTTG ACGGCCAGCG TTTTCGTCTGGTGCG ypfG 731417 - 732484 + | hypothetical protein tktB 734506 - 732503 - | transketolase 2, thiamin-binding TERM 987 734204 - 734220 + g 74 -7.9 -4.13945 | TGGTGTATAGCCAAT CTCCGGG TGG CCTGGGG TTTTCGAATGCAACT talA 735479 - 734529 - | transaldolase A TERM 988 736315 - 736305 - g 78 -5.4 -4.85599 | opp_overlap 736297 CGTAGTCGAGAAAAA CATC TCT GATG TGCGAATGGTAGTTT TERM 989 736596 - 736583 - g 86 -3.8 -5.4477 | AAATGGTCAAAAAAA TGGC CCGTGC GCCA ATGATCCTTGCTTTG maeB 735754 - 738033 + | putative fused malic enzyme oxidoreductase ; putative phosphotransacetylase TERM 990 738082 - 738048 - f 88 -12.3 -2.71011 | gap 1, opp_overlap 738049 ATTCTTGTTTAATTA TCA-CGCTTACCCTGA ATAT TCAGGGTAAGCGATGT TACTGCAATATATTA TERM 991 738049 - 738081 + F 100 -15.8 -3.18507 | gap 1, opp_overlap 738048 TTCTTGTTTAATTAT CA-CGCTTACCCTGA ATAT TCAGGGTAAGCGATG TTACTGCAATATATT TERM 992 738146 - 738134 - f 82 -2 -5.68489 | TAGAATAATAAAAAA TTGT GGTAT ACAA AAATATCTCGATATT TERM 993 738493 - 738479 - g 82 -11.4 -3.53761 | opp_overlap 738478 738468 TAACTCCCGGCGAAA CGGCGA TGA TCGCCG GTGATTTAGCACTGA ypfE 738328 - 738663 + | putative carboxysome-like ethanolaminosome structural protein with putative role in ethanol utilization TERM 994 738777 - 738767 - gf 71 -3.2 -4.82901 | CCCTCGCCAGAAAAA CACA GGC CGTG GAATTTAATGATAAT eutP 738676 - 739155 + | putative nucleoside triphosphate hydrolase domain protein eutQ 739130 - 739831 + | conserved hypothetical protein involved in degradation of ethanolamine eutT 739828 - 740631 + | putative cobalamin adenosyltransferase in ethanolamine utilization eutI 740628 - 741644 + | putative phosphotransacetylase subunit TERM 995 741864 - 741842 - g 82 -11.3 -3.55444 | gap 1, opp_overlap 741842 GTTGCAGCCTGTAAA GCGGCGACCG ATGC CGGT-GCCGC AGCGGCGCAGCGTAT cchA 741683 - 741976 + | putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein cchB 742083 - 742370 + | putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein TERM 996 742449 - 742475 + G 86 -7.2 -4.88407 | opp_overlap 742437 AAAGCAGTGACACGC CGCCCGCCTC CGTTCAT GAGATGGGCG TTTTTGCTTCCCTGG TERM 997 742677 - 742663 - g 70 -3.5 -4.60924 | gap 1, opp_overlap 742666 TAAATTTGCCAAAAA CGTCGC TCAG GCG-CG CGGTACGCCAGGCGT TERM 998 742765 - 742750 - g 70 -6 -4.2803 | opp_overlap 742749 GACCCTAATTGAAAA CGCGCC CTGG GGCGTG GTGGCTTCGGTGACG TERM 999 743104 - 743072 - g 72 -6.2 -4.33803 | gap 1 AAACACACCAATAAA CGTCTGATTGCC-GC AGGT GCTGGCAACCCGCCG GTGGTGGTGGATGAA eutE 742382 - 743785 + | putative aldehyde dehydrogenase, ethanolamine utilization protein TERM 1000 743764 - 743780 + F 73 -8.7 -3.55444 | overlap 743767 TCGCTGTGTATTAGT CGATGCG TTT CGCATTG TTTAAGGAGTAACCG TERM 1001 744063 - 744089 + G 79 -10.1 -3.7331 | opp_overlap 744061, overlap 744061 CTCGAGCAGCAATTC GGTCGCCGTTT TAGCC ATGCGGCGACC TCTTTTCCTCCAGGT TERM 1002 744442 - 744421 - g 86 -6.5 -5.14563 | opp_overlap 744421 CGGTGTACGAAAAAA TGGCGGACA TTGT TGCCCGGCA TATTGAAGGGCAGGG eutJ 743796 - 744632 + | putative chaperonin, ethanolamine utilization protein eutG 744622 - 745809 + | putative alcohol dehydrogenase in ethanolamine utilization; ethanolaminosome TERM 1003 745845 - 745811 - f 88 -9.9 -4.1552 | opp_overlap 745816 745834, overlap 745812 CAGCGGCGCAATAAA TGCCGGATGCGACGC TTGTC GCGTCTTATCCGGCC TGGGGGATTGCACAT TERM 1004 745844 - 745812 - f 100 -13.4 -3.08991 | opp_overlap 745816 745834, overlap 745811 AGCGGCGCAATAAAT GCCGGATGCGACGC TTGTC GCGTCTTATCCGGC CTGGGGGATTGCACA TERM 1005 745816 - 745835 + F 76 -10 -3.30124 | opp_overlap 745812 745811, overlap 745834 GCGCAATAAATGCCG GATGCGAC GCTT GTCGCGTC TTATCCGGCCTGGGG TERM 1006 745943 - 745961 + G 74 -7.5 -4.12254 | opp_overlap 745942 745943 745945 GGGAATTAACGAAAT CATCATG TACAT CATGATG TTCTTTATGCTGATA eutH 745926 - 747152 + | putative ethanolamine transporter TERM 1007 747485 - 747495 + G 77 -6.8 -4.46212 | overlap 747478 ATGACGCTCTCCCAG TCGC TTG GCGA TTTTGTCGTCGCCAG eutA 747149 - 748552 + | reactivating factor for ethanolamine ammonia lyase eutB 748564 - 749925 + | ethanolamine ammonia-lyase, large subunit, heavy chain eutC 749946 - 750833 + | ethanolamine ammonia-lyase, small subunit (light chain) eutL 750843 - 751502 + | putative carboxysome-related structural protein with putative role in ethanolamine utilization yffI 751515 - 752015 + | putative ethanolaminosome structural protein with putative role in ethanolamine utilization TERM 1008 753099 - 753071 - g 72 -5.9 -4.37092 | opp_overlap 753044 ATTGTTTGCAGAAAA GCCTTCACTGACG CTG CATCAGCGGATGC AGGAACTGGAGTGAG yfeG 752061 - 753113 + | putative DNA-binding transcriptional regulator EFER_0734 753582 - 753190 - | conserved hypothetical protein; Putative inner membrane EFER_0735 754808 - 753546 - | hypothetical protein hemF 755845 - 754946 - | coproporphyrinogen III oxidase TERM 1009 755621 - 755575 - G 93 -13.2 -3.69323 | overlap 755576 GCACTACCAGTGAAA CGCCCATCGCCTCGAAAC-TGC GTCCG GCAAGTTCCG-GGCGATGAGCA GTGGCGGAAGCAGGC TERM 1010 755620 - 755576 - G 90 -14.5 -2.81272 | overlap 755575 CACTACCAGTGAAAC GCCCATCGCCTCGAAAC-TGC GTCCG GCAAGTTCCG-GGCGATGAGC AGTGGCGGAAGCAGG amiA 756718 - 755849 - | N-acetylmuramoyl-l-alanine amidase I TERM 1011 755917 - 755928 + g 72 -5.8 -4.3739 | opp_overlap 755917, overlap 755905 TCACGCCTTCAGCAA TCGC TGTG GCGA TTTTCTGGCGAAATG ypeA 756931 - 757356 + | putative acyltransferase with acyl-CoA N-acyltransferase domain yfeZ 757343 - 757792 + | conserved hypothetical protein; putative inner membrane protein TERM 1012 758081 - 758101 + G 77 -3.1 -5.06451 | AGCGGAATGAAAACC GCGAACGGC AAC GTGGTGCGC TTTTTTGAAGTGATG yfeY 757853 - 758428 + | hypothetical protein TERM 1013 758484 - 758502 + F 91 -10.3 -4.20868 | opp_overlap 758484 AATAGCGCCCAACAA TGCCACG GATTG CGTGGCA TTCTTATTTTCAGGA TERM 1014 758502 - 758484 - f 82 -10.3 -3.63341 | opp_overlap 758484 AATAGCGCCCAACAA TGCCACG GATTG CGTGGCA TTCTTATTTTCAGGA TERM 1015 758989 - 758964 - g 70 -6 -4.1899 | opp_overlap 758982 758983, overlap 758981 TGACGGTACTGAAAA CCCGGCGGGT GAAGAG ACGCGCCGCG AAGTGGCGGTTATCA yfeX 758524 - 759423 + | hypothetical protein TERM 1016 759474 - 759447 - T 100 -13.5 -3.79251 | opp_overlap 759447 GATTCGATGATTAAA GGCCAGCCAGT AACACA ACTGACTGGCC TTTTTATTACTTCTG TERM 1017 759447 - 759474 + T 100 -11.3 -5.2204 | opp_overlap 759447 GATTCGATGATTAAA GGCCAGCCAGT AACACA ACTGACTGGCC TTTTTATTACTTCTG murQ 760785 - 759520 - | D-lactyl ether N-acetylmuramic-6-phosphate acid etherase; beta-lactamase family TERM 1018 760642 - 760602 - G 77 -12.6 -2.72661 | opp_overlap 760609, overlap 760585 760625 760636 GATTATCTTTAATGA TCAGCAGGTTAACGCCGG GATAA CCGGCATCAACTTGCTGG CTAATCCAGCGATCC murP 762212 - 760788 - | putative fused PTS enzymes: IIB component ; IIC component TERM 1019 761412 - 761400 - G 71 -9.1 -3.51793 | overlap 761398 CATAATGATCAAATA CGCCA GTG TGGCG GTGATCAGCAGAGTG TERM 1020 762033 - 762017 - G 70 -4.3 -4.57073 | TACCTGGTCCAAAAA CGACCTG TAC CTGATCG CTGGTCAAAATGACG yfeU 763112 - 762216 - | putative PTS component; possibly regulatory TERM 1021 762248 - 762266 + g 93 -2.4 -5.68023 | gap 1 CCTGACGAATAAAGC CGCCGTG TTGATC CA-GGCG TTTTTTTGCTTCTGC TERM 1022 764032 - 764042 + G 70 -6.8 -4.07859 | opp_overlap 764031 764032 CGCACGGCGCAAAAT TCGG TTA CCGA TTTACTGTTTGTTGG yfeT 763276 - 764133 + | putative DNA-binding transcriptional regulator ucpA 764262 - 765053 + | putative oxidoredutase, sulfate metabolism protein TERM 1023 765066 - 765089 + F 90 -11 -3.93038 | TGATTCACCTTTGTT TCCTCCCTGC ATTT GTGGGGAGGA TTTCGTCTTGAACTA cysP 765357 - 766373 + | thiosulfate transporter subunit ; periplasmic-binding component of ABC superfamily cysU 766373 - 767206 + | sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily TERM 1024 767758 - 767815 + G 74 -9.7 -3.56092 | gap 1 GCGATTTTGCTTGGC GCGTCTGGCTGGCAGATGTTCCGCCGCG TCA CGCTGCCGAACATCCGCTGGGC-GCTGC TTTACGGCGTGGTGC cysW 767206 - 768081 + | sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily cysA 768071 - 769168 + | sulfate/thiosulfate transporter subunit ; ATP-binding component of ABC superfamily TERM 1025 769190 - 769217 + F 100 -9.1 -4.72272 | gap 1, opp_overlap 769189 769190 GAGTGAATGTTAAAC GCCCGGAGGCGC TTCCC GCGA-TCCGGGC TTTTTAATGGCAAGG TERM 1026 770127 - 770161 + G 78 -9.3 -3.86524 | gap 1, overlap 770141 CCCCGGCGCTGTAGT GGTGGCGATCATCTGC GATC GCGGC-GATCGCTACC TTTCTACCGGGGTGT TERM 1027 770141 - 770157 + G 77 -12.3 -2.70354 | overlap 770127 TGGTGGCGATCATCT GCGATCG CGG CGATCGC TACCTTTCTACCGGG cysM 769303 - 770214 + | cysteine synthase B (O-acetylserine sulfhydrolase B) yfeK 770585 - 770217 - | hypothetical protein TERM 1028 771250 - 771237 - g 77 -6.7 -4.56597 | TTGCTGCCGCAAAAA GTCTG CTTT CAGAC ACATTAAAGTGGGTG pdxK 770690 - 771541 + | pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase TERM 1029 771548 - 771565 + T 100 -12.7 -4.96848 | opp_overlap 771548 GAAGCATAAAAAAAA TGGCGCC GATG GGCGCCA TTTTTCTCTGCGACA TERM 1030 771565 - 771548 - T 100 -12.7 -6.02345 | opp_overlap 771548 GAAGCATAAAAAAAA TGGCGCC GATG GGCGCCA TTTTTCTCTGCGACA crr 772094 - 771585 - | glucose-specific enzyme IIA component of PTS TERM 1031 771893 - 771916 + g 74 -3 -4.90525 | CAAAGATTTTACCAA TGGTGCCGTC TACA GGCGCGACCA TTTTGTTTCCAGTTG ptsI 773862 - 772135 - | PEP-protein phosphotransferase of PTS system (enzyme I) TERM 1032 773320 - 773338 + g 72 -4.5 -4.66833 | opp_overlap 773334 ACGTCCACCCGCATC GGTGATG AAACC CAGCACC TTTTTCAGGTTCAAC TERM 1033 773545 - 773574 + g 72 -6.5 -4.36903 | gap 1, opp_overlap 773544 773545, overlap 773547 CTGACCTTCGATAAC TTCATGAGCAGCTG CAT CAGCTG-TCATGTG TTTATCTTTAATCAG TERM 1034 773547 - 773572 + g 88 -11.3 -3.78193 | gap 1, opp_overlap 773544 773545, overlap 773545 GACCTTCGATAACTT CATGAGCAGCTG CAT CAGCTG-TCATG TGTTTATCTTTAATC TERM 1035 773667 - 773687 + g 72 -6.2 -4.30978 | CTTCTTTTTCTTCGC CGAAAGTT TCACC AGCTTTCG TTTTGATCGCTTCAA ptsH 774166 - 773909 - | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 1036 774495 - 774528 + r 71 -9.7 -2.6212 | opp_overlap 774504, overlap 774504 AACTTTGAAGCAGGC CACAAAAAAGCACCT GAAA AGGTGCTTTTTTACG CGTTTTTAACACTTT TERM 1037 774504 - 774519 + r 100 -9 -5.08011 | opp_overlap 774504, overlap 774495 GCAGGCCACAAAAAA GCACCT GAAA AGGTGC TTTTTTACGCGTTTT TERM 1038 774519 - 774504 - R 100 -9 -5.26316 | opp_overlap 774504 774495 GCAGGCCACAAAAAA GCACCT GAAA AGGTGC TTTTTTACGCGTTTT cysK 775519 - 774548 - | cysteine synthase A, O-acetylserine sulfhydrolase A subunit TERM 1039 775644 - 775663 + r 72 -9.2 -3.08798 | opp_overlap 775644, overlap 775646 ATCAGTATGGAATAA GAGGCGGC ATAA GCCACCTC TGTTCGCTGCACAAT TERM 1040 775663 - 775644 - R 90 -11.4 -3.69663 | opp_overlap 775644 775646 ATCAGTATGGAATAA GAGGCGGC ATAA GCCACCTC TGTTCGCTGCACAAT cysZ 776444 - 775683 - | putative inner membrane protein zipA 776624 - 777679 + | cell division protein involved in Z ring assembly TERM 1041 777711 - 777727 + F 100 -10.8 -4.67904 | TAACTCCTCTTCGAA CCCCCG CTTGT CGGGGG TTTTTAGCATTGATG ligA 777750 - 779765 + | DNA ligase, NAD(+)-dependent EFER_0764 779674 - 779985 + | hypothetical protein yfeH 780980 - 779982 - | putative sodium/bile acid symporter family (mazG-like) yfeN 782036 - 781257 - | putative outer membrane protein TERM 1042 781586 - 781575 - G 71 -2.2 -5.00884 | ACGTTTTGCAAAAAA TGGC TTAA ACCA GTAACCGTTTCCTGT xapA 782292 - 783125 + | purine nucleoside phosphorylase II TERM 1043 783164 - 783132 - f 74 -5 -4.83169 | gap 1, opp_overlap 783139, overlap 783138 783139 783140 783162 ATCGCCTGAGAAAAA TAACAATCGGCCTCA CTGA TGAGGCC-ATAATTA TGCGATAAGGAAACG TERM 1044 783159 - 783138 - f 72 -6.5 -4.36508 | opp_overlap 783139, overlap 783132 783139 783140 TGAGAAAAATAACAA TCGGCCTCA CTGA TGAGGCCAT AATTATGCGATAAGG TERM 1045 783158 - 783139 - f 74 -10 -3.20278 | opp_overlap 783139, overlap 783138 783132 783140 GAGAAAAATAACAAT CGGCCTCA CTGA TGAGGCCA TAATTATGCGATAAG TERM 1046 783157 - 783140 - f 79 -11.3 -2.5054 | opp_overlap 783139, overlap 783139 783138 783132 AGAAAAATAACAATC GGCCTCA CTGA TGAGGCC ATAATTATGCGATAA xapB 783183 - 784439 + | xanthosine transporter TERM 1047 784500 - 784539 + F 81 -10.9 -3.40371 | gap 1, opp_overlap 784500 784505 784509 CTTGAAGTATGACAA GTATATTAACTGGCGAGC AAATA GCCCGCCAGTTAA-ATGC TTCATTCATCAAGTC TERM 1048 784539 - 784500 - f 83 -10.9 -3.47227 | gap 1, opp_overlap 784500, overlap 784505 784509 CTTGAAGTATGACAA GTATATTAACTGGCGAGC AAATA GCCCGCCAGTTAA-ATGC TTCATTCATCAAGTC TERM 1049 784535 - 784505 - f 100 -16.3 -2.9834 | opp_overlap 784500, overlap 784500 784509 AGTATGACAAGTATA TTAACTGGCGAGC AAATA GCCCGCCAGTTAA ATGCTTCATTCATCA TERM 1050 784531 - 784509 - f 95 -12.7 -3.34104 | opp_overlap 784500, overlap 784505 784500 TGACAAGTATATTAA CTGGCGAGC AAATA GCCCGCCAG TTAAATGCTTCATTC TERM 1051 785047 - 785061 + G 70 -7.1 -4.0162 | opp_overlap 785027, overlap 785043 GCCGGCTACTGGCAA GCGCA AACCA TGCGC TTTCTCGTGTGGAGC TERM 1052 785418 - 785434 + G 74 -2.9 -5.00884 | overlap 785433 785433 GTTACGCTACCTTCA GCTCACT CTG ACTGGGC TTTTTTGCAAAGCGT xapR 784809 - 785693 + | HTH-type transcriptional regulator (Xanthosine operon regulatory protein) TERM 1053 785744 - 785711 - f 76 -9.8 -3.25942 | gap 1, opp_overlap 785712 785713 785721, overlap 785713 785721 ATTGGTTGAGAGGAA TAGCAAAAAAGCGCC TTTAG GGCGCTTTTTTAC-A TTGGTGGGTCGTGCA TERM 1054 785712 - 785744 + F 74 -9.9 -3.19463 | opp_overlap 785711 785713 785721, overlap 785713 785721 TTGGTTGAGAGGAAT AGCAAAAAAGCGCCT TTA GGGCGCTTTTTTACA TTGGTGGGTCGTGCA TERM 1055 785743 - 785713 - f 100 -14.9 -3.19602 | opp_overlap 785713 785712 785721, overlap 785711 785721 TGGTTGAGAGGAATA GCAAAAAAGCGCC TTTAG GGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 1056 785713 - 785743 + F 91 -13.4 -2.51464 | opp_overlap 785711 785713 785721, overlap 785712 785721 TGGTTGAGAGGAATA GCAAAAAAGCGCCT TTA GGGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 1057 785735 - 785721 - f 100 -8.5 -5.28683 | opp_overlap 785721 785713 785712, overlap 785713 785711 AGGAATAGCAAAAAA GCGCC TTTAG GGCGC TTTTTTACATTGGTG TERM 1058 785721 - 785735 + F 100 -9.2 -5.17576 | opp_overlap 785713 785711 785721, overlap 785713 785712 AGGAATAGCAAAAAA GCGCCT TTA GGGCGC TTTTTTACATTGGTG TERM 1059 787059 - 787047 - g 73 -9.1 -3.61328 | ATCAATATTCTGAAA GCGCT GAA AGCGC CGGTACCGGTTTACG gltX 786402 - 787817 + | glutamyl-tRNA synthetase TERM 1060 787859 - 787837 - T 100 -12.7 -4.51238 | opp_overlap 787837 CGCATAAAAGATAAA CGGCAGGAG AAATA CCCCTGCCG TTTTTTTACGCTGAT TERM 1061 787837 - 787859 + T 100 -10.5 -5.44721 | opp_overlap 787837 CGCATAAAAGATAAA CGGCAGGAG AAATA CCCCTGCCG TTTTTTTACGCTGAT yfeD 788257 - 787865 - | putative nucleic acid-binding transcriptional regulator TERM 1062 788141 - 788154 + g 75 -6.7 -4.43755 | overlap 788142 TCCACCTTTAACCCC CGGAA ATCT TTCCG TTTTCCATTTCTTCT yfeC 788618 - 788259 - | putative nucleic acid-binding transcriptional regulator TERM 1063 789063 - 789034 - H 70 -9.3 -2.84051 | opp_overlap 789034 789039, overlap 789039 TTAGCTCCACCAAAT TTAAACCCTCGCT GCGA AGCGGGGGTTTTA TTTTTTCTGCTTTTC TERM 1064 789034 - 789063 + H 100 -11.5 -5.4588 | opp_overlap 789034 789039, overlap 789039 TTAGCTCCACCAAAT TTAAACCCTCGCT GCGA AGCGGGGGTTTTA TTTTTTCTGCTTTTC TERM 1065 789039 - 789058 + H 100 -11.4 -5.49579 | opp_overlap 789034 789039, overlap 789034 TCCACCAAATTTAAA CCCTCGCT GCGA AGCGGGGG TTTTATTTTTTCTGC TERM 1066 789058 - 789039 - H 81 -9.2 -3.87149 | opp_overlap 789039 789034, overlap 789034 TCCACCAAATTTAAA CCCTCGCT GCGA AGCGGGGG TTTTATTTTTTCTGC TERM 1067 789163 - 789186 + H 76 -7.6 -4.18983 | gap 1 TAACTGACTGGACAG GTTTGATTCGC ATC GCGAAT-AAAC TTATTATTTATATGC TERM 1068 789664 - 789646 - g 70 -6 -4.25104 | CGGTGGGGATCAAAA CCTGCA TGTTTAT TGCAGG AGATATTTTTGCCTT TERM 1069 791007 - 791017 + G 70 -5.4 -4.42062 | overlap 791009 CCTGAGATTGCCGCG CGTA TTG TACG TTTATTTAAACGATA EFER_0775 789165 - 791423 + | hypothetical protein TERM 1070 791457 - 791435 - T 100 -14.2 -5.11613 | opp_overlap 791438 ATAGCAGGCAAAAAA TAACCGGGGC AAA ACCCCGGTTA TTGCGGTAATTAATG TERM 1071 791438 - 791454 + T 84 -10.8 -3.66732 | opp_overlap 791435 GCAGGCAAAAAATAA CCGGGG CAAAA CCCCGG TTATTGCGGTAATTA nupC 792718 - 791516 - | nucleoside (except guanosine) transporter TERM 1072 792125 - 792104 - G 70 -7.3 -4.00782 | CGACAGCACGATAAA GGTGCTGAA CATG TTCAGTACC AGCGCCGCAACGACG TERM 1073 793023 - 793038 + H 74 -7.6 -4.07568 | opp_overlap 793018 793023 TGACATAGCATGAAA CATAGC AAAG GCTATG TTTTAGAGGCACAAG TERM 1074 793038 - 793023 - H 72 -7.6 -3.83409 | opp_overlap 793023, overlap 793018 TGACATAGCATGAAA CATAGC AAAG GCTATG TTTTAGAGGCACAAG TERM 1075 793894 - 793921 + G 74 -3.4 -5.00138 | gap 1 TATCTGACGCTGCAA CCGTTGTT-AAGC CAT GCTGCGGCAACGG TTTTTGGTTTAAGTC mntH 793054 - 794292 + | manganese/divalent cation transporter ypeC 794686 - 794360 - | hypothetical protein yfeO 796057 - 794801 - | putative ion channel protein glk 796261 - 797226 + | glucokinase TERM 1076 797261 - 797242 - f 91 -12.2 -3.53091 | opp_overlap 797239 797242 ATCCTTCCTGTCAAA TCGGGAGA TAAC TCTCCCGA TAATCTTTTAAATCA TERM 1077 797242 - 797261 + F 86 -12.2 -2.95081 | opp_overlap 797242, overlap 797239 ATCCTTCCTGTCAAA TCGGGAGA TAAC TCTCCCGA TAATCTTTTAAATCA ypdH 797445 - 797771 + | putative enzyme IIB component of PTS TERM 1078 797888 - 797878 - g 70 -6.8 -4.08767 | overlap 797881 CGCAGGCCTCTAAAA CCAG CTT CTGG GGTGAGCTCCCGCAG TERM 1079 798365 - 798339 - g 76 -12.4 -2.50994 | opp_overlap 798341 798346, overlap 798338 798341 798346 GTGAAGTGGATGAAC CAGAAAATCCAG TTA CCGGATTTCCTG TTAGCGTTCAAAACC TERM 1080 798358 - 798346 - g 72 -5.5 -4.56607 | opp_overlap 798346 798341, overlap 798341 798339 798338 GGATGAACCAGAAAA TCCAG TTA CCGGA TTTCCTGTTAGCGTT ypdG 797793 - 799040 + | putative enzyme IIC component of PTS TERM 1081 799838 - 799880 + G 81 -13.2 -2.70932 | ATCTCCGCGATTCGC CCCGGCGTGCGCTGCCAGCA GGT TGACGACGCCGCGCGCCGGG TCATTACAGAAGCCG ypdF 799055 - 800140 + | Xaa-Pro and Met-Xaa peptidase ypdE 800140 - 801177 + | broad substrate metalloaminopeptidase TERM 1082 802844 - 802868 + G 78 -8.5 -4.23213 | opp_overlap 802844 CGGTGTGCTACATCA TCGACCACTTC TGC GATGAGGTCGA TTTCTTCAGTATCGG ypdD 801202 - 803697 + | putative fused PTS enzymes (multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component ypdC 804557 - 803700 - | putative DNA-binding protein TERM 1083 804035 - 804019 - G 84 -7.9 -4.60797 | overlap 804021 CTGTGATAGAGAAAA TCGCCGC GCG GCTGCGA ATTGCCCGGCGGCAT TERM 1084 804459 - 804430 - G 78 -8.4 -4.25437 | overlap 804447 AAATCAATACATAAA CTGCCCACCGGC AACGAG GCCGGCTGGCTG GCAAACCAGACGCGC ypdB 805303 - 804569 - | putative response regulator in two-component system with YpdA ypdA 807015 - 805318 - | putative sensory kinase in two-component system with YpdB TERM 1085 806150 - 806168 + g 84 -7.6 -4.7078 | GTGCGGTGGGCTTCA TCATTATT TTT AATAATGA TTTTTCCGTAATTCA TERM 1086 806398 - 806419 + g 72 -7.9 -3.91506 | gap 1, opp_overlap 806361 806359, overlap 806408 ATCCAGCGCCAACTT GGCCTGCCGC GCG GCG-CTGGCC TCTTTTTCGCCCTCA TERM 1087 806408 - 806421 + g 70 -3.7 -4.59773 | overlap 806398 AACTTGGCCTGCCGC GCGGC GCTG GCCTC TTTTTCGCCCTCAAC TERM 1088 807347 - 807330 - H 71 -6.9 -4.11394 | overlap 807316 807332 AGGCTATTTTCAAAA CAGCCAC CATC GTGGCAG CGTCGCTCGGACGGT TERM 1089 807345 - 807332 - H 70 -8.1 -3.65542 | overlap 807316 807330 GCTATTTTCAAAACA GCCAC CATC GTGGC AGCGTCGCTCGGACG yfdZ 807392 - 808630 + | putative aminotransferase, PLP-dependent TERM 1090 808653 - 808672 + T 100 -13.6 -4.98531 | opp_overlap 808653 CGTCAGAAATGCAAA CAGGAGCC AGAT GGCTCCTG TTTTTCGTTTCGCAG TERM 1091 808672 - 808653 - T 100 -13.6 -3.89215 | opp_overlap 808653 CGTCAGAAATGCAAA CAGGAGCC AGAT GGCTCCTG TTTTTCGTTTCGCAG TERM 1092 809089 - 809049 - T 78 -2 -5.52384 | gap 2, opp_overlap 809049 GGGGGATGAAAAAAA TGCGCCTGTAAAACCATATT TAA ATCATGGTTATA--GGCGCA TTTACACTGTTCTTT ddg 810044 - 809118 - | palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase TERM 1093 809999 - 809979 - G 72 -7.6 -3.93038 | GACGCCAAGACCAAA CCACGTCA GCCAG TAACGTGG GTGCAAAAATTTGCG TERM 1094 810581 - 810591 + G 77 -3.2 -5.05116 | opp_overlap 810576, overlap 810576 CGGCGGAAATGAAAT TGTC ACT GGCA TTTTCTTGTTTCTGG EFER_0791 810411 - 810659 + | hypothetical protein TERM 1095 810748 - 810717 - T 90 -11.6 -3.68619 | CGTAATTTATTGAAA TGCCGGATAAGACA TTAA CGCCGTATCCGGCA AGAAGAAACATATCT EFER_0792 812170 - 810785 - | putative tartrate transporter EFER_0793 812457 - 812930 + | putative transcriptional repressor of for multidrug resistance pump (MarR family) TERM 1096 813585 - 813607 + G 70 -11.2 -2.74144 | overlap 813584 GAGCGGCTCTGCAAC CGTCGTCGCC AGG GGCGATGTCG ATTTCGCCCTCGGCA TERM 1097 814194 - 814139 - g 70 -10.3 -3.17146 | gap 1, overlap 814191 CCCTGCTAGAAGATA CGCCTCTGCTGGCGCTGGCGAC-GCT GCCGG AACTGCCGCCGACGCTGGAAGAGGCG GAAGATCCGCTTAGC EFER_0794 813253 - 814383 + | putative amidase TERM 1098 814719 - 814730 + G 72 -5.8 -4.34402 | opp_overlap 814694, overlap 814705 814694 AGACGGCTCGGCAGG CTGG GTCG CCAG TTTTGGTATGAGCCC TERM 1099 815015 - 815042 + G 72 -8.4 -3.79747 | gap 1, overlap 815017 CGGTGTGGGATACGG TCG-GGCTGGCGG GAA CCGGCAGCCATGA TTTGCTGGTGGATGA EFER_0795 814456 - 815616 + | conserved hypothetical protein, putative COG1960 EFER_0796 815637 - 815987 + | hypothetical protein EFER_0797 815998 - 816510 + | hypothetical protein EFER_0798 816522 - 817823 + | Ring hydroxylating dioxygenase, alpha subunit:Rieske [2Fe-2S] region EFER_0799 817793 - 818302 + | Aromatic-ring-hydroxylating dioxygenase, beta subunit TERM 1100 818757 - 818741 - gf 76 -9.3 -3.48276 | GCTGGCCGGACAGAA CGGTGGC ACG GCCTCCG GGGCGCACTATGCCG EFER_0800 818271 - 819053 + | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) TERM 1101 819163 - 819133 - g 79 -12.6 -3.05384 | CGCTTGCCGACGCAA CCGGCGCTGAAC TGCCTGC GTTCACCGCCGG GGCGCACGTCGACCT TERM 1102 819433 - 819452 + G 72 -7 -4.21275 | overlap 819426 819422 CGATGGCGGCGGAGC TGCACGCC GCCG GGCGCGCG TTTTCGCTGCATTAC TERM 1103 819528 - 819516 - g 72 -4.7 -4.66833 | opp_overlap 819518, overlap 819517 GCCGAACTGGAAAAA GCGCC GTG GGCGG ATCGCGTCTGGCTGC EFER_0801 819063 - 819995 + | Vanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein) EFER_0802 820006 - 820506 + | putative flavin:NADH reductase ycdH TERM 1104 820989 - 820970 - g 76 -7.8 -4.18494 | gap 1, opp_overlap 820971 GATGCTGAGTGAAAA CGC-CCCGG CAT CCAGGCGCG GCTTCTTTACCGCCT EFER_0803 820527 - 821855 + | General substrate transporter:Major facilitator superfamily TERM 1105 821927 - 821952 + F 76 -7.7 -4.21945 | opp_overlap 821927 GAGTAACAGTTAAAA TAGTGGGTAAA CTTT TTTATCCGCTA TTTATCTGTCTTACT TERM 1106 822905 - 822888 - g 85 -2.7 -5.36441 | TTCTTAGATAAAAAA TGCAAAG TTCC CTTTCCA GTTAAAATAAATAGA TERM 1107 823474 - 823460 - g 70 -4.3 -4.52589 | TTTGGGTATAGAAAA TGACT TTCAT AGTCA TGAGGAAACAGTTAG EFER_0804 822540 - 824006 + | hypothetical protein TERM 1108 824042 - 824067 + T 86 -11.8 -3.17194 | ACTTTCTCCTTCTGC GCGGGCAGCC CCGCAC GCCTGCCCGC TTCGCTTAACAGACT TERM 1109 824229 - 824247 + T 77 -10.3 -3.07575 | opp_overlap 824229 AAAAGGTGTTAAAAA TCCCGGT ACTTG ACCGGGA TTACGTGGGCATTTT TERM 1110 824247 - 824229 - T 100 -10.3 -4.61527 | opp_overlap 824229 AAAAGGTGTTAAAAA TCCCGGT ACTTG ACCGGGA TTACGTGGGCATTTT EFER_0805 824551 - 824270 - | putative activator from phage origin ( Ogr family transcription activator) EFER_0806 825099 - 824548 - | putative polarity suppression protein from phage origin EFER_0807 825839 - 825096 - | putative capsid morphogenesis protein from phage ( head size determination protein) TERM 1111 825570 - 825590 + g 86 -3.9 -5.41359 | overlap 825572 AAGCGTTTCTCGTCC CAGCGCA ATTTCCG TGCGCAG TTTTTTCATTTCCTT EFER_0808 828912 - 826240 - | Putative inner membrane protein (modular protein) from phage origin TERM 1112 828134 - 828152 + g 72 -4.6 -4.65895 | CCGTCCTGAAAATCG TTATCACC GGC GATGATAA TTTTTACCTCAGGCC TERM 1113 828342 - 828362 + g 76 -3.9 -5.02074 | overlap 828343 CAAACGCGCCTTTCA TCGTGCTGC CGG GCAGTATGC TTTTTTCACCCGTCG TERM 1114 828811 - 828779 - G 78 -8.4 -4.20696 | opp_overlap 828800 828801 TCATCAAGGCGAAAA CGATCCTTGCCC CCACATTTC GGGCAGGGACCG TGCCTGCCGTTTTCA EFER_0809 829292 - 828909 - | conserved hypothetical protein from phage origin EFER_0810 829573 - 829289 - | hypothetical protein from phage origin TERM 1115 829441 - 829451 + g 74 -3.2 -5.0133 | overlap 829438 AGAGAAGCTGGAGCA TGTC GCA GGCA TTTTTTGCGCGGGTC EFER_0811 829994 - 829605 - | hypothetical protein from phage origin EFER_0812 830187 - 829957 - | Phage immunity repressor protein (fragment) EFER_0813 830250 - 830444 + | conserved hypothetical protein from phage origin TERM 1116 830452 - 830477 + T 86 -9 -4.34759 | opp_overlap 830433 830452 830451 AGAATTGATTAATAC GTTGGGGAGG CTTTTT TCTCCCCAGC TTTGTTAATATTGTC EFER_0814 830709 - 830494 - | hypothetical protein from phage origin TERM 1117 830749 - 830714 - R 81 -9.2 -3.76492 | gap 1, opp_overlap 830717, overlap 830715 830717 TTTAATGTCATGAAA TTACCTGCCGTGTT-AT GTA ATGAACACGGCAGATAC TATGGGGATATCAAA TERM 1118 830748 - 830715 - R 89 -12.7 -2.85574 | gap 1, opp_overlap 830717, overlap 830714 830717 TTAATGTCATGAAAT TACCTGCCGTGTT-AT GTA ATGAACACGGCAGATA CTATGGGGATATCAA TERM 1119 830746 - 830717 - R 79 -10.9 -2.97439 | gap 1, opp_overlap 830717, overlap 830715 830714 AATGTCATGAAATTA CCTGCCGTGTT-AT GTA ATGAACACGGCAGA TACTATGGGGATATC EFER_0815 831693 - 830812 - | hypothetical protein from phage origin int 833058 - 831724 - | phage integrase TERM 1120 832615 - 832625 + g 86 -4 -5.42259 | overlap 832617 GAGGTGGTTTTCCAT TTCT CGG AGAA TTTTTTTACGGGTGA yfdC 834274 - 833333 - | conserved hypothetical protein; putative inner membrane protein TERM 1121 834164 - 834189 + g 100 -2.5 -5.78622 | opp_overlap 834169, overlap 834166 CGCCATGGCCCTTGA CGGAAGGCGAT CTTC ATCGACTTCTA TTTTTTTTCCACTGG TERM 1122 834166 - 834187 + g 77 -7.3 -4.53853 | opp_overlap 834169, overlap 834164 CCATGGCCCTTGACG GAAGGCGAT CTTC ATCGACTTC TATTTTTTTTCCACT vacJ 834563 - 835318 + | putative lipoprotein TERM 1123 835334 - 835368 + T 71 -8.2 -3.48772 | gap 1, opp_overlap 835341, overlap 835341 CGTATAAAGCAGAAA T-AAAAAAGGTGAGT CGCAAA ACTCACCTTTTTTCA TTATGTCAGAACCTT TERM 1124 835341 - 835360 + T 100 -7.9 -5.35354 | opp_overlap 835341, overlap 835334 AGCAGAAATAAAAAA GGTGAGT CGCAAA ACTCACC TTTTTTCATTATGTC TERM 1125 835360 - 835341 - T 100 -8.6 -5.73978 | opp_overlap 835341 835334 AGCAGAAATAAAAAA GGTGAGTC GCAA AACTCACC TTTTTTCATTATGTC fadL 836771 - 835398 - | long-chain fatty acid outer membrane transporter TERM 1126 835473 - 835487 + g 77 -8.6 -4.03085 | overlap 835483 ATAAGCTGCCGCACC TTCACC TTC GGTGAA TTTCACTTTTTGTCC TERM 1127 835483 - 835493 + g 80 -5.4 -4.88067 | overlap 835473 GCACCTTCACCTTCG GTGA ATT TCAC TTTTTGTCCGTGCAT TERM 1128 836792 - 836776 - H 71 -9.5 -3.06418 | overlap 836773 TTTTTATACAAACTA TGTTACG TGC CGTAACA GGAGCGCGAAGTGTA yfcZ 837087 - 837395 + | hypothetical protein TERM 1129 837410 - 837438 + F 100 -14.6 -5.23292 | ATCCCTTCCTGTTAA CGCCTCTGCCGT TTACT GCGGTAGAGGCG TTTTCTTTTGTGTCC TERM 1130 838200 - 838188 - g 71 -9.1 -3.52234 | overlap 838182 838181 TTAATAAAGCCAGAA CGCTG GGC CAGCG GCTGAAATTATTTTC yfcY 837734 - 839044 + | beta-ketoacyl-CoA thiolase, anaerobic, subunit TERM 1131 839312 - 839297 - g 77 -10.4 -3.6715 | CCATGGAAGCCGAAA CCCTGG CACG CCAGGG GCAACAGTTAATGGC TERM 1132 840841 - 840829 - g 100 -4.8 -5.46698 | CGTAAAAGCAAAAAA CAGG TTGAC CCTG AAATTTATAAGATTA yfcX 839044 - 841188 + | fused enoyl-CoA hydratase and epimerase and isomerase ; 3-hydroxyacyl-CoA dehydrogenase TERM 1133 841324 - 841367 + F 76 -11 -2.70298 | gap 1, opp_overlap 841317 841314 841311 841318, overlap 841317 841323 841325 AGGCACAATGCCGAC CA-CCGCATTACTGCAGCCCC CAG GGAGCAGCAGTACTGTGGGTG ATTCTGGTTAACAAA TERM 1134 841325 - 841365 + F 75 -10.3 -2.89447 | opp_overlap 841317 841314 841311 841318, overlap 841317 841324 841323 GGCACAATGCCGACC ACCGCATTACTGCAGCCCC CAG GGAGCAGCAGTACTGTGGG TGATTCTGGTTAACA sixA 841394 - 841879 + | phosphohistidine phosphatase TERM 1135 841892 - 841916 + F 90 -7.1 -5.12971 | opp_overlap 841871 841892 TGATTAGTTCAAAAA GCCCGATAACT TTA ATTGATCGGGC TTTTTATTGAGTATT TERM 1136 841916 - 841892 - f 81 -7.1 -4.63527 | opp_overlap 841892, overlap 841871 TGATTAGTTCAAAAA GCCCGATAACT TTA ATTGATCGGGC TTTTTATTGAGTATT TERM 1137 842937 - 842905 - g 71 -10.7 -2.95234 | opp_overlap 842910, overlap 842904 842910 CCAATAAAGGCAAAC CTAAACAGACTCTGA ACT TCAAAGCCTGGTTAG TCGGTGCGGCTGGTA TERM 1138 842932 - 842910 - g 78 -9.2 -3.87583 | opp_overlap 842910, overlap 842905 842904 AAAGGCAAACCTAAA CAGACTCTGA ACT TCAAAGCCTG GTTAGTCGGTGCGGC yfcV 842448 - 843008 + | putative fimbrial-like adhesin exported protein TERM 1139 843017 - 843043 + F 100 -12.3 -4.0896 | opp_overlap 843014 843018, overlap 843018 TCTCTAAGGTAATTC ACCCCCATAGC ATCGC GCTATGGGGGA TTTTGGAACGAGTTT TERM 1140 843018 - 843042 + F 100 -15.8 -3.04894 | opp_overlap 843018 843014, overlap 843017 CTCTAAGGTAATTCA CCCCCATAGC ATCGC GCTATGGGGG ATTTTGGAACGAGTT TERM 1141 843042 - 843018 - f 100 -16.5 -2.57013 | opp_overlap 843017 843018, overlap 843014 CTCTAAGGTAATTCA CCCCCATAGCA TCG CGCTATGGGGG ATTTTGGAACGAGTT TERM 1142 845701 - 845679 - g 85 -9.8 -4.258 | TGATTCAGGAACAAA CGCAGCAGGT CAC ACCTGGCGCG GAACCCATGGCTATT EFER_0826 843083 - 845731 + | putative outer membrane usher protein yfcU precursor TERM 1143 845802 - 845818 + G 83 -10.1 -4.07568 | CCTGCGCTGGCGCTG CTGGTGG CGG CCGCCAG TTTTACCACCCACGC yfcS 845751 - 846503 + | putative periplasmic pilus exported chaperone yfcR 846519 - 847034 + | putative fimbrial-like adhesin exported protein yfcQ 847031 - 847519 + | putative fimbrial-like adhesin exported protein yfcP 847516 - 848055 + | putative exported fimbrial-like adhesin protein TERM 1144 848648 - 848622 - g 90 -13.1 -3.551 | GCGTAATTGAGACAA CGCTTTCCACC TATTT GATGGAAAGCG GAAAACTGTGTGATG yfcO 848042 - 848881 + | hypothetical protein TERM 1145 848882 - 848923 + T 100 -13.4 -3.24188 | gap 2, opp_overlap 848884 848887 TTGAATATGTTGTAA CAT-TA-TTTCACCGACCAG TTAG CTGGTCGGTGAAAGTACATG TTGATAATGATGTCA TERM 1146 848919 - 848884 - T 100 -13.4 -3.04248 | opp_overlap 848882, overlap 848887 GAATATGTTGTAACA TTATTTCACCGACCAG TTAG CTGGTCGGTGAAAGTA CATGTTGATAATGAT TERM 1147 848916 - 848887 - T 100 -19.5 -2.74192 | opp_overlap 848882, overlap 848884 TATGTTGTAACATTA TTTCACCGACCAG TTAG CTGGTCGGTGAAA GTACATGTTGATAAT yfcN 849487 - 848936 - | hypothetical protein TERM 1148 849459 - 849475 + g 80 -5.1 -5.00388 | overlap 849462 AAAAGCGCCTGGTCC TCCTCAC TAA GTGATGA TTTCTTTTTCATTTA prmB 849652 - 850584 + | N5-glutamine methyltransferase TERM 1149 850990 - 850961 - g 77 -2.7 -5.14163 | gap 1, overlap 850963 ACCTACGAACAAAAA TACGGCCTGCGCGA TTA TCGCGGCGGCGG-A CGTTCCTCCGCTCGC TERM 1150 850989 - 850963 - g 76 -7.8 -4.19587 | overlap 850961 CTACGAACAAAAATA CGGCCTGCGCGA TTA TCGCGGCGGCGG ACGTTCCTCCGCTCG TERM 1151 851062 - 851048 - g 77 -2.8 -5.03314 | opp_overlap 851048, overlap 851050 GCGATTGCCAAAAAA TATCTC GCT GAGAAA TTTGGTATAGAAATT aroC 850619 - 851704 + | chorismate synthase TERM 1152 851760 - 851717 - g 93 -8.8 -4.93177 | gap 1, overlap 851719 TAAAAATGAACAAAA CTGCGATTGCGCTGCTGGC TCTGCTT GCCAGCAGCGCCAGC-CTG GCAGCGACGCCGTGG TERM 1153 851801 - 851786 - g 72 -4.6 -4.61482 | CGTGGCAAAAAATAA CCCAAC CTGT GCCGGG TAGCGCACAATCGAT TERM 1154 852105 - 852091 - g 79 -3.5 -5.03145 | gap 1 CAACTGCCGAAAAAA CGCTGG ACCT CC-GCG CAACTCTTGCGCCCG mepA 851707 - 852531 + | murein DD-endopeptidase TERM 1155 852623 - 852656 + G 81 -12.5 -3.14132 | gap 1 ATTTATCGACTCTAT TGCCGGTGGTGGTGGG CTA CTCACCATT-CCGGCA TTAATGGCGGCGGGG yfcA 852531 - 853340 + | conserved hypothetical protein; putative inner membrane protein yfcM 853340 - 853888 + | hypothetical protein TERM 1156 854186 - 854173 - g 70 -6.7 -4.10657 | CGATATGTGGGAAAA CCTGT TTCA ACAGG CTTCACAGCAGTAAG yfcL 853922 - 854200 + | hypothetical protein TERM 1157 854239 - 854205 - T 100 -13.7 -3.42407 | gap 1, overlap 854206 CACAGCAGTAAGTAA TGTGCCGGATAAGGCG TTCA CGCCATATCCGGCA-A GCAATGCCAAAGCAG TERM 1158 854239 - 854206 - T 100 -15.3 -2.64962 | overlap 854205 ACAGCAGTAAGTAAT GTGCCGGATAAGGCG TTCA CGCCATATCCGGCAA GCAATGCCAAAGCAG trmC 856262 - 854256 - | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase ; FAD-dependent demodification enzyme TERM 1159 855444 - 855414 - G 72 -10.5 -3.10164 | gap 1, overlap 855416 855432 855433 CCATCCACGACGTAA TAGCGCCAGCGACA ACAA TG-CGCTGGCGATA CCACCGCCGATAATC TERM 1160 855644 - 855622 - G 72 -6.3 -4.37886 | gap 1 CCACGGCGGACAAAA CCGGCAGACG TAAA CGT-TGCCAG TGTGCCGCCAGGACG TERM 1161 856357 - 856372 + H 71 -9 -3.25192 | overlap 856355 GATCGGACTTGTTCG GCGTAC AAGT GTACGC TATTGTGCCATTCGA fabB 856421 - 857641 + | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 1162 857672 - 857654 - f 71 -8.8 -3.36648 | TAATAGATCGGATAA GATGCGCC AGC GTCGCATC CGGCAGTAACGCAAA TERM 1163 857713 - 857682 - f 100 -13.8 -3.14931 | opp_overlap 857689, overlap 857689 CGCATCCGGCAGTAA CGCAAAAGGGAGCC TGAC GGCTCCCTTTTTCA CATCATTGACAATCA TERM 1164 857706 - 857689 - f 100 -12.7 -4.30014 | opp_overlap 857689, overlap 857682 GGCAGTAACGCAAAA GGGAGCC TGAC GGCTCCC TTTTTCACATCATTG TERM 1165 857689 - 857706 + F 100 -12.7 -4.64598 | opp_overlap 857689 857682 GGCAGTAACGCAAAA GGGAGCC TGAC GGCTCCC TTTTTCACATCATTG TERM 1166 858546 - 858565 + G 70 -5.6 -4.39287 | AAACCAGGTATTGGG CTGGCGCT GCAG GGCGTCGG TTTTGCTGTGATTGG TERM 1167 858894 - 858908 + G 88 -12.8 -3.60234 | opp_overlap 858891 CGTGGTACAGCACTG GGCGGC TAC GCCGCC TTTCAGGATATCTCC yfcJ 857874 - 859052 + | putative transporter; UPF0226 family flk 860056 - 859049 - | flagella control of anti-sigma factor FlgM secretion into the periplasm pdxB 860153 - 861289 + | erythronate-4-phosphate dehydrogenase TERM 1168 861302 - 861329 + F 86 -9.9 -4.04579 | overlap 861319 861321 TAATCTCTTCTTCAT GCTCTCTGCTG TAACAT TGGCAGAGAGC TTTGCTATTTCTGGA usg 861355 - 862368 + | putative semialdehyde dehydrogenase TERM 1169 862619 - 862588 - g 100 -13.6 -3.57144 | TTGTGCATTTCGAAA CGACCGCGCAGCGC AAAG ACGCTGCGTGGACG TTGGGCGTAAATGCG truA 862368 - 863180 + | pseudouridylate synthase I TERM 1170 863246 - 863190 - f 81 -9.5 -3.90241 | overlap 863181 863201 GACTAACGAGAATAA TGCTCGGAACATTTCAGGCTGTAGCCA ACG TAGTTACAGCCTGAAAGATGACGAGTA CAAGGCATAGGCTAA TERM 1171 863235 - 863201 - f 100 -15.2 -3.03338 | overlap 863190 ATAATGCTCGGAACA TTTCAGGCTGTAGCCA ACG TAGTTACAGCCTGAAA GATGACGAGTACAAG dedA 863263 - 863922 + | conserved hypothetical protein; putative inner membrane protein TERM 1172 863934 - 863946 + F 75 -3.3 -5.24531 | ATAAAAAGTAACTCC GCGGT TCG ACCAC TTTTTTATCCAAAGT TERM 1173 864056 - 864042 - f 70 -3.5 -4.78848 | TCCCCAAAGATAAAA CTGGC ATCGA ACCAG GTTCAGACAGAAAGG accD 864078 - 864992 + | acetyl-CoA carboxylase, beta (carboxyltranferase) subunit TERM 1174 865003 - 865025 + F 100 -17 -4.46656 | opp_overlap 865003 CCTGATAACTGATAA GGGCAGGGCC ACT GGCTCTGCCC TTTTGCTATTCTCAC TERM 1175 865025 - 865003 - f 100 -14.8 -3.45054 | opp_overlap 865003 CCTGATAACTGATAA GGGCAGGGCC ACT GGCTCTGCCC TTTTGCTATTCTCAC TERM 1176 865086 - 865110 + GF 86 -9.1 -4.38927 | AAACGCACTCCTCAA GCCGCGTCGCC TCT GGCTTCGTGGC TTTCTTATCTGGAAA TERM 1177 865663 - 865650 - gf 73 -3.7 -4.8622 | opp_overlap 865653 TTCCGCAATGAAAAA CCGGC AATT GTCGG AGAGCCTGAAATGCC folC 865062 - 866330 + | bifunctional folylpolyglutamate synthase and dihydrofolate synthase TERM 1178 866726 - 866716 - gf 81 -4.6 -5.06414 | overlap 866717 GTCGTGGAAGAAAAA GCCG CCC CGAC GGGTAAAGCCTATGT dedD 866302 - 866970 + | hypothetical protein TERM 1179 867101 - 867126 + F 100 -9.8 -5.1356 | GGCATAAAAAGTCGA TGGCGTTGAA TATTTT TTCAGCGCCA TTTTTATTGATGCGC cvpA 867229 - 867717 + | membrane protein required for colicin V production TERM 1180 868852 - 868839 - g 73 -3.7 -4.83169 | ATTCCGTGATAAAAA CGTCC TGCT GGTCG ACGACTCCATCGTCC purF 867754 - 869271 + | amidophosphoribosyltransferase TERM 1181 869284 - 869302 + F 86 -12.4 -2.53382 | TAATGACTTCGCTCA GGGTGCCG GTC TGGCACCC TGACTTGCAACTCCT ubiX 869366 - 869935 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 1182 869944 - 869962 + F 100 -13.2 -4.07687 | opp_overlap 869937 869936 CGCATAACTCCACTG TTGCCCTG TTT CAGGGCAA TTTTGCAACCGCGAT TERM 1183 870478 - 870454 - g 71 -2.8 -4.81851 | opp_overlap 870454, overlap 870457 ACTGAAAGCGAAAAA GATCGACG CCATTATTT CGTCGCTC TCCATTACCGATAAA TERM 1184 870856 - 870833 - g 100 -5.2 -5.56264 | GTGAAAGACAAAAAA TACTTCGGTG ACGG CACCGGTGTA GGGCTACGTAAAGAT argT 870200 - 870982 + | lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1185 871028 - 870999 - f 100 -9.4 -4.62336 | gap 1 ACGCCATGGGAAAAA TGCACCAG-CTGA GTAAT CCAGACTGGTGCA ATTCAGATTCTTTGC hisJ 871205 - 871987 + | histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily hisQ 872077 - 872763 + | histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily TERM 1186 873451 - 873438 - g 72 -4.5 -4.70879 | opp_overlap 873442, overlap 873439 CGCAAAGCGGAAAAA CGCTG GTTG CAGCA TGTGAAACCTTCTTC hisM 872760 - 873476 + | histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily hisP 873484 - 874257 + | histidine/lysine/arginine/ornithine transporter subunit ; ATP-binding component of ABC superfamily TERM 1187 874264 - 874287 + F 100 -12.4 -3.63744 | overlap 874262 CTGAAATAATTCCCC CTCCGGTGGC TAAC GCTGCCGGAG TATTTTCAAGAGAAA TERM 1188 874478 - 874490 + G 71 -9.1 -3.51168 | overlap 874476 TCGACAACTTCCACG CCGCA TGA TGCGG TATTTAAATCTTTTT yfcI 874454 - 875356 + | putative transposase yfcH 876297 - 875404 - | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain folX 876680 - 876318 - | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase yfcG 877384 - 876737 - | putative S-transferase TERM 1189 877545 - 877558 + G 79 -2.3 -5.27923 | CCCGCAATCACGCTT TGGTC AGAT GCCCA TTTTTTCTCCCCTTA TERM 1190 877930 - 877914 - g 100 -4.3 -5.7946 | GCCGGAACAAAAAAA GCGCCAC TCA GTGAGGC CGGTAGGTCGAGTGC yfcF 877446 - 878165 + | putative enzyme TERM 1191 878473 - 878497 + GF 72 -6.4 -4.2558 | gap 1, overlap 878473 ATGCTGCTTCGTTTT CC-GCTGACAG CTCC CTGGCAGCAGG TTTTGCTGGAAGATA yfcE 878218 - 878772 + | putative phosphatase yfcD 878732 - 879385 + | putative NUDIX hydrolase EFER_0865 880406 - 879387 - | putative transcriptional regulator with PLP domain TERM 1192 879441 - 879412 - G 86 -9.4 -4.32857 | gap 1, opp_overlap 879406 TCTCGCAAACATAAA CTGGGAGCGATCA ATTGA CGATCGCTCC-AG TTGCCGTCTTTAATC TERM 1193 879949 - 879920 - G 80 -11.5 -3.29626 | gap 1 CAATATTCATATCAA TGG-GATCGGCACG AAT CGCGCCAATCTCCA TCACCGGAATTGAGG TERM 1194 880533 - 880578 + H 90 -10.8 -3.93236 | gap 1, opp_overlap 880529 AAGGGTAAGTATTTT GATAGCGCTATCACAAATCTG AATGA TACATTT-TGATAGCGCTATC TTTGTGACGTTGATC TERM 1195 881000 - 881015 + G 72 -6.8 -4.19746 | TCATATCGAAATGAT CTCGGC ACTG GCTGAG TTATTTTCCAGTGAA EFER_0866 880656 - 881099 + | putative phosphotransferase enzyme IIA component TERM 1196 881299 - 881321 + G 88 -8.4 -4.59342 | CATTCCGATCTTTCA TCAGCAACGC CTG GTGCTGCTGA TTTATTTGTGATGGC EFER_0867 881167 - 881451 + | putative phosphotransferase transport system, IIB component EFER_0868 881468 - 882862 + | putative phosphotransferase transport system, IIC component EFER_0869 882859 - 883689 + | putative carbohydrate degradation enzyme EFER_0870 883682 - 884635 + | putative carbohydrate degradation enzyme TERM 1197 884650 - 884684 + T 86 -11.7 -3.32411 | opp_overlap 884655, overlap 884655 ACTGATTCTAAAATA AAAAATCCGGAAATA ATCAC TATTTCCGGATTTTG CTTTTAGTCTTTTAC TERM 1198 884679 - 884655 - T 100 -12.3 -5.79595 | opp_overlap 884650 884655 TTCTAAAATAAAAAA TCCGGAAATAA TCA CTATTTCCGGA TTTTGCTTTTAGTCT TERM 1199 884655 - 884679 + T 100 -11.6 -4.71222 | opp_overlap 884655, overlap 884650 TTCTAAAATAAAAAA TCCGGAAATA ATCAC TATTTCCGGA TTTTGCTTTTAGTCT pta 886859 - 884715 - | phosphate acetyltransferase TERM 1200 886355 - 886371 + g 72 -5.1 -4.56597 | GTTTGTTAACGATAA CGCCGAT GAT ATTGGTG TTTTTGGCACCGCCG TERM 1201 886932 - 886905 - R 100 -16.4 -4.36914 | gap 1, overlap 886908 GGGCGGGTTACAAAA CAGCACCGCCAGC AGG GCTGGCGGTG-TG AAATCAGGCAGTCAG TERM 1202 886930 - 886908 - R 100 -19.2 -2.8733 | overlap 886905 CGGGTTACAAAACAG CACCGCCAGC AGG GCTGGCGGTG TGAAATCAGGCAGTC ackA 888138 - 886936 - | acetate kinase A and propionate kinase 2 TERM 1203 887309 - 887333 + g 72 -4.9 -4.71828 | overlap 887310 ACTTCGGTCAGACCC AGCAGACCAGA CTC TTTGGTCAGCA TTTTGTTGATGGCGT EFER_0873 888486 - 888310 - | hypothetical protein yfbV 888477 - 888932 + | conserved hypothetical protein; putative inner membrane protein TERM 1204 888975 - 888958 - fH 100 -9.9 -4.55689 | opp_overlap 888958 ATTACGCATATAAAA GAAGGCA CTGA TGCCTTC TTTTTTTTCACAGTT TERM 1205 888958 - 888975 + FH 100 -9.9 -5.77853 | opp_overlap 888958 ATTACGCATATAAAA GAAGGCA CTGA TGCCTTC TTTTTTTTCACAGTT yfbU 888996 - 889511 + | hypothetical protein yfbT 889522 - 890172 + | putative phosphatase TERM 1206 891032 - 891058 + G 70 -7.2 -4.08945 | ACGCTACGGTGCGAA CGTCATCGGTGT TGA ACGCTGGCGACG TTTTCGCCGCGTAAT TERM 1207 891926 - 891941 + G 74 -8.2 -3.86015 | overlap 891918 GATGGTCGTCGCGAT GGCTGC ATCA GCGGCC TTTATGACACCGGTA TERM 1208 891998 - 892009 + G 72 -5.8 -4.38712 | opp_overlap 891998 TGGTCCGGGCAATTA TCGC TTCA GCGA TTTTGTGAAGATAGG yfbS 890259 - 892091 + | putative transporter yfbR 892850 - 892131 - | deoxyribonucleoside 5'-monophosphatase TERM 1209 892246 - 892269 + gT 81 -9 -4.03141 | AATGTCTTTTCAAGT CGAGTTTTTG CCAG CAAAAATTCG TTATTTCCTGCTGAT TERM 1210 892805 - 892779 - GT 89 -11.6 -3.48395 | opp_overlap 892779 ATTGTGCGCAGAGAA TGCCGCCGGA TGCAAAT TCCGGCAGCA TTTTTGGAGTTTACA TERM 1211 892779 - 892805 + gT 100 -9.4 -4.70879 | opp_overlap 892779 ATTGTGCGCAGAGAA TGCCGCCGGA TGCAAAT TCCGGCAGCA TTTTTGGAGTTTACA yfbQ 894033 - 892816 - | putative aminotransferase TERM 1212 893802 - 893817 + gH 70 -6 -4.18494 | GCATGATCGCTTTAC GGGCGG AATA CAGCCC TTTTGAATCACAATA TERM 1213 894028 - 894044 + gH 71 -2.1 -4.90906 | GGATTTTTCAATGGG GGACATG AAT CTTGACC TTTTTCCTGTTGTCG lrhA 894966 - 895904 + | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes TERM 1214 895973 - 895941 - f 95 -7.1 -5.4756 | gap 1, opp_overlap 895941 AATCTGAATAAAAAA TAGCCACTGACGTG TGAAAG CAC-TCAGGGGCTA TTTTTTTGTACTACT TERM 1215 895941 - 895973 + F 100 -7.8 -5.67967 | gap 1, opp_overlap 895941 AATCTGAATAAAAAA TAGCCACTGACGTGT GAAA GCAC-TCAGGGGCTA TTTTTTTGTACTACT TERM 1216 896186 - 896169 - f 91 -5.5 -5.60864 | opp_overlap 896169 896172, overlap 896171 CACAGATCAAAAAAA TACCCCT CATT AGGGGGA TTAATCATTACAAAT TERM 1217 896184 - 896171 - f 82 -8.1 -4.42962 | opp_overlap 896169 896172, overlap 896169 CAGATCAAAAAAATA CCCCT CATT AGGGG GATTAATCATTACAA TERM 1218 896418 - 896434 + F 100 -3.7 -6.13503 | overlap 896419 GGCTGTTTACTGATT TCTACAG TGA TTGTAGG TTTTTTTTATTCCTC TERM 1219 896819 - 896833 + G 100 -2.8 -5.71295 | GCGGCTGGGTAGGCT TTGTGG AAG CTGCAA TTTTTATTTTTGTGT nuoA 896521 - 896964 + | NADH:ubiquinone oxidoreductase, membrane subunit A nuoB 896980 - 897642 + | NADH:ubiquinone oxidoreductase, chain B TERM 1220 897995 - 898019 + G 74 -3.3 -4.89729 | opp_overlap 897996, overlap 897996 898016 AACGTCTGCGCACAC ACCGCGAAGGG TTA CCTGCCGCGGA TTTTTCCGTTTTCTA TERM 1221 898016 - 898027 + G 72 -5.8 -4.41548 | opp_overlap 897996, overlap 897996 897995 AAGGGTTACCTGCCG CGGA TTTT TCCG TTTTCTACCATCTGA nuoC 897736 - 899538 + | NADH:ubiquinone oxidoreductase, chain C,D nuoE 899541 - 900041 + | NADH:ubiquinone oxidoreductase, chain E TERM 1222 900115 - 900101 - g 81 -10 -3.96148 | overlap 900104 CTGCGCGATGACAAA CAGCCA GTG TGGCTG GACGAATATCGCAGC TERM 1223 900916 - 900902 - g 88 -11.4 -3.84451 | opp_overlap 900914 GGCCTGAAATTCAAA GCCTGG CAG CCAGGC GGCGCGGGCACCGAC nuoF 900038 - 901375 + | NADH:ubiquinone oxidoreductase, chain F TERM 1224 901536 - 901555 + G 73 -11.4 -2.71144 | TACTTTTGCTGGCAT CCGGCGCT GGGA AGCGTCGG TGCTTGCCGCCAGTG TERM 1225 902191 - 902180 - g 70 -5.8 -4.18018 | GCGTCGTATCGAAAA CCGT TACA ACGG TACGGTAAACCACTA nuoG 901422 - 904154 + | NADH:ubiquinone oxidoreductase, chain G TERM 1226 904758 - 904782 + G 77 -12.1 -2.71712 | overlap 904757 CCTTTGCCATCGCGG GCGTGGCGGTG TGT CACCGTCACCC GTTTGACCAGCCGGA nuoH 904151 - 905128 + | NADH:ubiquinone oxidoreductase, membrane subunit H nuoI 905143 - 905685 + | NADH:ubiquinone oxidoreductase, chain I nuoJ 905697 - 906251 + | NADH:ubiquinone oxidoreductase, membrane subunit J nuoK 906248 - 906550 + | NADH:ubiquinone oxidoreductase, membrane subunit K TERM 1227 906667 - 906698 + G 83 -5.1 -5.08824 | overlap 906668 GGCTCTGTGGGCCTG GCGGCGCTGGTAA CCGCCT TTATCGGCGTCGA TTTTTTCGCTAACGG nuoL 906547 - 908388 + | NADH:ubiquinone oxidoreductase, membrane subunit L TERM 1228 909118 - 909128 + G 74 -2.4 -5.10461 | GATGTTGATTGCTAT CCTG GCG CTGG TTTTTGTTCACTACA nuoM 908552 - 910081 + | NADH:ubiquinone oxidoreductase, membrane subunit M TERM 1229 910906 - 910918 + G 76 -9.1 -3.74792 | overlap 910894 GATTCGCGTGGTGCT GGCGA TTA TCGCC TTTGCCTCTATCATC nuoN 910268 - 911545 + | NADH:ubiquinone oxidoreductase, membrane subunit N TERM 1230 911558 - 911595 + F 100 -12.9 -3.3516 | opp_overlap 911569, overlap 911559 911569 TAAGGTTGAGTGTTG ATGTAAAAAAACCGCCG ATTT CGGCGGTTTTTTTATGG TGTTAATTGTTGCTA TERM 1231 911559 - 911594 + F 100 -16.4 -2.60373 | opp_overlap 911569, overlap 911558 911569 AAGGTTGAGTGTTGA TGTAAAAAAACCGCCG ATTT CGGCGGTTTTTTTATG GTGTTAATTGTTGCT TERM 1232 911584 - 911569 - f 100 -11.8 -5.47218 | opp_overlap 911569 911559 911558 GTTGATGTAAAAAAA CCGCCG ATTT CGGCGG TTTTTTTATGGTGTT TERM 1233 911569 - 911584 + F 100 -11.8 -5.70829 | opp_overlap 911569, overlap 911559 911558 GTTGATGTAAAAAAA CCGCCG ATTT CGGCGG TTTTTTTATGGTGTT EFER_0895 911688 - 912404 + | hypothetical protein EFER_0896 912974 - 912399 - | hypothetical protein TERM 1234 913031 - 913062 + r 70 -6 -4.26076 | CTAAATCATTCGTAA GCTGGATAAAAT ATTTTTGC ATTATATCCAGC TTTTAATACGAATGC yfbM 913629 - 913126 - | hypothetical protein EFER_0898 913983 - 915614 + | conserved hypothetical protein; putative exported protein TERM 1235 915625 - 915657 + T 100 -14.4 -5.16237 | gap 1, overlap 915628 GTTAATATTTATGAT TATTCGCCGTCGATA TGTT TATCGACGGCGA-TA TTTTTTAGTGGGCTT TERM 1236 915628 - 915655 + T 100 -18.6 -4.20707 | overlap 915625 AATATTTATGATTAT TCGCCGTCGATA TGTT TATCGACGGCGA TATTTTTTAGTGGGC TERM 1237 915672 - 915701 + T 75 -7.2 -4.37092 | gap 1, opp_overlap 915689 ATTTTTTAGTGGGCT TACTG-GTGGCTG ACCAA CAGCCCCGCAGTA TTTTGTGCGGCACGT EFER_0899 916705 - 915671 - | putative chemotaxis protein (cheV-like) TERM 1238 916728 - 916710 - R 80 -3.8 -5.31877 | overlap 916712 916714 AGTGAGGACAAAAAA TACAGCGT TAA ACGCTAAA AACTGCGTAATCGTG TERM 1239 916726 - 916712 - R 72 -6.4 -4.29153 | overlap 916710 916714 TGAGGACAAAAAATA CAGCGT TAA ACGCTA AAAACTGCGTAATCG elaC 917679 - 916717 - | binuclear zinc phosphodiesterase TERM 1240 918009 - 917995 - g 70 -4.2 -4.71828 | AGCTGATGAACAAAA CACTTG AGT CATGTG CCCGTTACTGGCCTG elaA 917700 - 918161 + | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 1241 918463 - 918453 - g 81 -6.8 -4.72986 | opp_overlap 918452 TATGTCCATGAAAAA CCCT GGC AGGG AATTGGTGTAGGTGC elaB 918216 - 918521 + | hypothetical protein TERM 1242 919476 - 919457 - g 80 -5.6 -4.91109 | GGCGGATGATAAAAA CCAGCGCG AGAA CATGCTGG TGGTGGAAGATATCT menF 918615 - 919910 + | isochorismate synthase 2 TERM 1243 920121 - 920136 + G 85 -10.4 -4.15044 | GTTAACGTTAGCAGC GGCGGA GAAT TCCGCC TTTATTCACCACACC TERM 1244 920639 - 920629 - g 71 -3.2 -4.81249 | CTGGAAAGTGAAAAA CAGC GTG ACTG GTTCTTCTGGCGACA TERM 1245 921351 - 921370 + G 71 -9.2 -3.53444 | overlap 921352 TTACGATCTCAACGC GCTGGCGC TATT GCGCCAGG TTTCCGCGCCGCTGG TERM 1246 921352 - 921369 + G 77 -12.7 -2.71924 | overlap 921351 TACGATCTCAACGCG CTGGCGC TATT GCGCCAG GTTTCCGCGCCGCTG menD 919999 - 921669 + | bifunctional 2-oxoglutarate decarboxylase and SHCHC synthase TERM 1247 921712 - 921690 - g 72 -7 -4.18494 | opp_overlap 921695 921698, overlap 921693 921699 CACGCGCAGGCAAAA CACGGCAAAC CAG GTTTACCCTG GCTGGTGTTTTTGCA TERM 1248 922257 - 922268 + G 86 -5.8 -5.06472 | GCTAACCTTAGCGCC CGCA CATT TGCG TTTTATTATTTATGT TERM 1249 922394 - 922417 + G 81 -10.4 -3.91897 | gap 1, opp_overlap 922380 TCCCGCTGGCGTAAT CGCAAG-TCTG GCG CAGATCTTGCG TTTCTGACTAAAGGG yfbB 921666 - 922424 + | putative thioesterase, menaquinone synthesis menB 922439 - 923296 + | dihydroxynaphthoic acid synthetase TERM 1250 923382 - 923372 - g 85 -8.2 -4.57837 | opp_overlap 923372 923371 923369 ACAGGCGGTTAAAAA CCCG CGA CGGG CTATATGTTTGCCTG menC 923296 - 924258 + | o-succinylbenzoyl-CoA synthase menE 924255 - 925610 + | o-succinylbenzoate-CoA ligase pmrD 925723 - 925989 + | polymyxin resistance protein B EFER_0910 926651 - 925983 - | hypothetical protein TERM 1251 926094 - 926071 - GT 75 -5.2 -4.65895 | overlap 926073 GCCTTCAGCGAAAAA GTTCCTTCCC AGCC GGGAAGTACC ATAGATGCAATCCAT yfbW 926704 - 926369 - | conserved hypothetical protein; inner membrane protein TERM 1252 926591 - 926611 + g 70 -4.6 -4.55295 | overlap 926593 CCCCAGCCCCAGCCA CAGCGCGA TATGT TTGCGCCG TTTGTTTATCGCCAC arnT 928383 - 926701 - | 4-amino-4-deoxy-L-arabinose transferase TERM 1253 927395 - 927381 - GR 75 -7.1 -4.25283 | ATCCGGCCATTAAAA TCGCC AGCGG GGCGA AGCATGAAAGAATAT TERM 1254 927459 - 927447 - GR 90 -4.9 -5.42259 | CCATGCTGAAAAAAA GTAAT GGC ATTAC AATCCAACATAACAA yfbH 929255 - 928353 - | hypothetical protein TERM 1255 929073 - 929056 - GR 86 -11.3 -3.28001 | opp_overlap 929055, overlap 929051 CAGCCGTAAAGCGAA GCTGCGT TTGA ACGCAGC ATCTTCCACAGGAAC yfbG 931234 - 929252 - | fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase TERM 1256 930949 - 930936 - G 74 -5.9 -4.54727 | CCGTGCAAATTAAAA GCCCC GTGC GGAGC CAGTTTTAAAATCTC yfbF 932214 - 931234 - | undecaprenyl phosphate-L-Ara4FN transferase yfbE 933357 - 932218 - | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent TERM 1257 932398 - 932409 + g 82 -2.2 -5.45802 | GCGAAAATGAAGTCC GGTG CCAA TACC TTTTTCTTTTAGCGC TERM 1258 933608 - 933622 + H 86 -5.8 -5.26316 | opp_overlap 933608 TAAAACCTGTAATTA TCTATT TGG AATAGA TTTTTTCTCCGCTCA ais 933688 - 934269 + | hypothetical protein TERM 1259 934278 - 934303 + T 100 -10.5 -4.63218 | opp_overlap 934285, overlap 934280 GTATTAATCAGTAGC GATGACAGCCA TTAA TGGCTGTCATA TTTTGTTACAGCAAA TERM 1260 934280 - 934301 + T 100 -13.1 -3.93367 | opp_overlap 934285, overlap 934278 ATTAATCAGTAGCGA TGACAGCCA TTAA TGGCTGTCA TATTTTGTTACAGCA yfaO 934734 - 934309 - | putative NUDIX hydrolase yfaZ 934964 - 935506 + | putative outer membrane porin protein TERM 1261 936102 - 936120 + G 87 -4.5 -5.27335 | gap 1, overlap 936103 TCGAGCACGAAATCC TGC-CGCG CCTG CGCGAGCG TTTTTCTTTACCGCA yfaY 935606 - 936808 + | hypothetical protein TERM 1262 936811 - 936827 + F 70 -7.9 -3.72576 | overlap 936820 CTTATCCGTCTGATT CCGCCAC TCT GTGCCGG TTTACTGCACCGGCA TERM 1263 936820 - 936844 + F 86 -11.5 -3.37344 | overlap 936811 CTGATTCCGCCACTC TGTGCCGGT TTACTGC ACCGGCACA TTCCTTCCATCGAAA EFER_0921 937027 - 937374 + | hypothetical protein TERM 1264 937378 - 937411 + T 100 -12.4 -3.43553 | opp_overlap 937382, overlap 937368 GGTAGTTATTAATAT CAAAGGCCCACGGG GAATTG CACGTGGGCCTGTG TTAATTAGTGGTTAT TERM 1265 937407 - 937382 - T 100 -11.8 -3.95022 | opp_overlap 937378 937368 GTTATTAATATCAAA GGCCCACGGG GAATTG CACGTGGGCC TGTGTTAATTAGTGG yfaD 938342 - 937416 - | Conserved hypothetical protein, putative transposase TERM 1266 938287 - 938266 - G 78 -7.9 -4.38712 | TGTATTTCGAGAAAA TCCCGCGCG GTTT CGGGCGAGA ACATAAAGGTTTTAA TERM 1267 938523 - 938495 - R 100 -16.1 -4.56597 | TCGCGCCCGCAAAAA TGCCCGATAAGCA ATG CGCTTACCGGGCA TCACAAGGAAGATTA glpC 939726 - 938536 - | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit glpB 940982 - 939723 - | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , membrane anchor subunit TERM 1268 939960 - 939970 + g 74 -8.2 -3.86897 | CTTATACCATTCACC CCGC GTG GCGG TTTGTAGCACATCAA TERM 1269 940898 - 940913 + g 72 -4.6 -4.66833 | CACGAGTGACAATGG CACAGC GCAG GCCGTG TTTTTGCAGTTGCAG glpA 942600 - 940972 - | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , large subunit, FAD/NAD(P)-binding TERM 1270 942579 - 942593 + g 70 -4.2 -4.59414 | overlap 942580 TAATCACGTCACCTG TTTGCG AGT CGCGAG TTTTCATTGTTATCC TERM 1271 943134 - 943149 + GH 70 -6 -4.2828 | GGCTCGGTGTCGGAT CGCTCG AATC CGCGCG TTTTCCTCCCTGCAG TERM 1272 943587 - 943599 + GH 71 -3.3 -4.85599 | opp_overlap 943588 943595, overlap 943588 943595 GCGGAGCAGGAACTG ACTGC AAA GCAGA TTTTTATGCAGTACG TERM 1273 944023 - 944007 - gH 79 -3.5 -5.08824 | CTGGCACCGAAAAAA GCGGCAG GTA CGGCAGC GGGCTTTACCGGGCT glpT 942870 - 944228 + | sn-glycerol-3-phosphate transporter TERM 1274 945108 - 945097 - gf 70 -5.8 -4.21607 | CTGATTGAAGAGAAA TCCC AGCC GGGA AATATTCAGCTTACC glpQ 944176 - 945312 + | periplasmic glycerophosphodiester phosphodiesterase TERM 1275 945321 - 945349 + F 100 -14.6 -4.04174 | overlap 945322 GAAATAATCCCACCT TCGGCATTCCGG CCTGC CCGGAATGCCGC TTTGCTTCTGTAACA TERM 1276 945322 - 945348 + F 100 -18.1 -3.02023 | overlap 945321 AAATAATCCCACCTT CGGCATTCCGG CCTGC CCGGAATGCCG CTTTGCTTCTGTAAC TERM 1277 946013 - 945993 - g 79 -3.8 -5.03314 | overlap 945994 945995 TTGATCTGGAAAAAA GTCGCCGC CGATT GCGTCGTC AAAAAGCAGCTCAGC inaA 945464 - 946114 + | hypothetical protein TERM 1278 946160 - 946118 - T 77 -10.7 -2.75382 | gap 1, overlap 946132 TACGCCATGTAATCA CGTAG-ACCAGATAAGACGC GTAA GCGTCGCATCTGGCACTACA ACCAATTCACATCTC TERM 1279 946145 - 946132 - T 70 -8.1 -3.57918 | overlap 946118 ACGTAGACCAGATAA GACGC GTAA GCGTC GCATCTGGCACTACA TERM 1280 946191 - 946216 + T 70 -7.6 -3.61178 | opp_overlap 946207 GATTTCAATATCGCC TTTTGCCCGG CAACAA CAGGGCAAAA TTTCCCCTGGCTGAA yfaE 946421 - 946167 - | putative 2Fe-2S cluster-containing protein; putative oxidoreductase subunit nrdB 947551 - 946421 - | ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like nrdA 949899 - 947614 - | ribonucleoside diphosphate reductase 1, alpha subunit TERM 1281 948924 - 948937 + g 77 -6.7 -4.56597 | GCACGCGGTTGCCTT CAACC CCAC GGTTG TTTTTCAACACCAGC TERM 1282 950878 - 950865 - g 76 -8.1 -4.28487 | opp_overlap 950865, overlap 950860 CACCACAAAATGAAA CAGGG ATGA CCCTG TTTGCTAATAACTCG TERM 1283 951697 - 951723 + G 85 -13.8 -2.82516 | overlap 951702 CGGCGACACGCACTG CCAGAGCGATCC GCA GGATTGCTTTGG TCTGATGGTCGGCAG TERM 1284 951702 - 951718 + G 74 -8.7 -3.86916 | overlap 951697 ACACGCACTGCCAGA GCGATCC GCA GGATTGC TTTGGTCTGATGGTC yfaL 950582 - 954346 + | adhesin ubiG 955209 - 954487 - | bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase TERM 1285 954552 - 954578 + g 75 -11.6 -3.08358 | GCTTAAAAGTATTAG TGATCGGGTTGT AAT GCAGCCCGGTCA TATGTCGTTCTTTAA TERM 1286 956228 - 956208 - g 82 -2.4 -5.45802 | overlap 956221 CTGGTAAAAGAAAAA CGCGTGGA AGGCA TCAGCGCG CTGCGTGACGAGTCT gyrA 955356 - 957992 + | DNA gyrase (type II topoisomerase), subunit A TERM 1287 957999 - 958026 + T 87 -8.4 -4.48221 | opp_overlap 958004, overlap 958004 GACGAGTAATCAAGT TAAAAGGGCCGA AAAT TCGGCCCTTTAC TTTTCTGACTTAGTC TERM 1288 958004 - 958021 + T 100 -12.7 -4.27483 | opp_overlap 958004, overlap 957999 GTAATCAAGTTAAAA GGGCCGA AAAT TCGGCCC TTTACTTTTCTGACT TERM 1289 958021 - 958004 - T 100 -12.7 -4.32201 | opp_overlap 958004 957999 GTAATCAAGTTAAAA GGGCCGA AAAT TCGGCCC TTTACTTTTCTGACT TERM 1290 958092 - 958074 - T 100 -12.4 -3.76232 | opp_overlap 958068 958074 GGCTGAAACAGATAA CCACCCGC CAT GCGAGTGG TTCTGATTTGTTAAT TERM 1291 958074 - 958092 + T 82 -10.2 -3.69564 | opp_overlap 958074, overlap 958068 GGCTGAAACAGATAA CCACCCGC CAT GCGAGTGG TTCTGATTTGTTAAT atoB 959287 - 958103 - | acetyl-CoA acetyltransferase atoE 960635 - 959313 - | short chain fatty acid transporter TERM 1292 959663 - 959643 - G 71 -3.2 -4.76041 | opp_overlap 959650, overlap 959644 GACATTGATGAAAAA TTCGGTGA TCAGG CCACCGAG GCCAGAGTGTTCCAT atoA 961282 - 960632 - | acetyl-CoA:acetoacetyl-CoA transferase, beta subunit atoD 961944 - 961282 - | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit TERM 1293 962088 - 962132 + r 100 -21.7 -5.0916 | opp_overlap 962083, overlap 962087 GAGGGGAATATTGCA CTGCTATGCAGGATTTTGCGC ACT GTGCAAATTTCTGCATAGCAG TTTTTGTCTTACGCA TERM 1294 962224 - 962189 - R 71 -9 -3.2614 | gap 1, overlap 962190 CAGTTTGTACATTAA GGCACGGCGACTGATAC CGA GCATCAG-CGCGGTGCG AGTACGGTTTCCTTC TERM 1295 962223 - 962190 - R 86 -12.5 -2.5547 | gap 1, overlap 962189 AGTTTGTACATTAAG GCACGGCGACTGATAC CGA GCATCAG-CGCGGTGC GAGTACGGTTTCCTT TERM 1296 962831 - 962816 - R 75 -10.4 -2.89824 | overlap 962815 TCATCAAGGAATAAT GTGCCG CTGT CGGCAC GCTCAAACAGTCCCT TERM 1297 963303 - 963330 + r 85 -9.2 -4.08945 | gap 1, opp_overlap 963301 TCATCAGGACAATGG GCG-TGCGTGG ATTATGA CCACGCATCGC TTTTAACGCACTGAT TERM 1298 963426 - 963410 - R 77 -10.9 -2.77522 | overlap 963409 ACACGGGTGAACAAT GGCAATG CTT CATTGCC GTTACAGGCGCAATG atoS 965357 - 963531 - | sensory histidine kinase in two-component regulatory system with AtoC rcsC 965524 - 968373 + | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 1299 968438 - 968400 - T 72 -6.2 -4.24404 | gap 2, overlap 968402 968405 ACTTAAAGCTTAAAA TATGAGGCCGGATAAGGT GTTAG ACCTTATCCGG-CGC-TA AGGGAGTAGCGGGCA TERM 1300 968439 - 968402 - T 93 -12.2 -3.71804 | gap 1, overlap 968400 968405 TTAAAGCTTAAAATA TGAG-GCCGGATAAGGT GTTAG ACCTTATCCGGCGCTAA GGGAGTAGCGGGCAA TERM 1301 968435 - 968405 - T 100 -14.1 -2.94739 | overlap 968400 968402 AAGCTTAAAATATGA GGCCGGATAAGGT GTTAG ACCTTATCCGGCG CTAAGGGAGTAGCGG rcsB 969107 - 968457 - | DNA-binding response regulator in two-component regulatory system with RcsC and YojN TERM 1302 968898 - 968918 + g 70 -6.9 -4.03413 | opp_overlap 968901, overlap 968901 CTTTATATATTTAAT TAAGGTGAT CCC ATCACCATA TTTATCTCCAGGCAT rcsD 971997 - 969124 - | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 1303 970426 - 970452 + g 90 -5 -5.4505 | opp_overlap 970434 CCCCTGCTGATTCTT CTCATACAGACG TTG CGCCTGCTTGAG TTTTTTATTCACCAG TERM 1304 970772 - 970784 + g 74 -7.7 -4.08945 | ATTACCGGAGAAGGC GTGGT TTC ACCAC TTTTCCCGGCATAGT TERM 1305 970835 - 970824 - G 73 -3.6 -4.74103 | TGGTGAATCCAAAAA CGGC CAGC GCCA ACAGACCAATATTCA TERM 1306 971626 - 971645 + g 73 -3.6 -4.78848 | overlap 971628 971640 CTGAATAGCATGGGT GATATCAA CAAT TTGATAAC TTTTATCTTTGAGCC TERM 1307 971747 - 971732 - G 79 -4.6 -4.95618 | AATAGTAAAAAGAAA CGGGTA ATGC TTCCCG GCAGAAGGGAGAATC TERM 1308 972130 - 972112 - H 100 -14.6 -5.89947 | GAAAGGTAAAAAAAA CCGGATGC TTC GCATCCGG TTGAAATAGGGGTAA TERM 1309 972298 - 972320 + H 78 -4.3 -5.12617 | opp_overlap 972292 TTTGAAATATTTCCT TCAGAAAAT TGCTT ATTTTTTGA TTTTTTGAGTGATTG ompC 972532 - 973653 + | outer membrane porin protein C TERM 1310 973688 - 973675 - f 78 -9.5 -3.72576 | opp_overlap 973675 TTTCTGTTGACCAAA GGGCC TGCG GGCCC TTTTTTCATTGCTTT TERM 1311 973675 - 973688 + F 100 -9.5 -5.33921 | opp_overlap 973675 TTTCTGTTGACCAAA GGGCC TGCG GGCCC TTTTTTCATTGCTTT yojL 973776 - 974831 + | putative thiamine biosynthesis lipoprotein; defective assembly or repair of ThiH Fe-S cluster ada 974905 - 975969 + | fused DNA-binding transcriptional dual regulator ; O6-methylguanine-DNA methyltransferase TERM 1312 976245 - 976230 - g 71 -3.2 -4.78326 | overlap 976231 CCGCAAACAAATAAA CCATGG CCCG CCATGC CGCATAGTTTTCATG alkB 975969 - 976619 + | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions TERM 1313 977631 - 977619 - g 71 -9.1 -3.53012 | CTCGCGCCTTTCAAA GCGGA GTT TCCGC GCCCGCAGGCGTTCC yojI 976695 - 978338 + | fused multidrug transport subunits of ABC superfamily transporter: permease component/ATP-binding component TERM 1314 978921 - 978951 + G 78 -8.2 -4.25458 | overlap 978915 978922 TTGGGCACACCAGGT CGAACGTGGTGTGC TGC GAACCCCACGTTCA TTTATTAATACCGTT TERM 1315 978922 - 978950 + G 77 -11.7 -3.14552 | overlap 978915 978921 TGGGCACACCAGGTC GAACGTGGTGTGC TGC GAACCCCACGTTC ATTTATTAATACCGT TERM 1316 979254 - 979219 - g 71 -3.3 -4.80453 | gap 1, overlap 979215 979220 979224 TCATTACAAAAGAAA TCAAACTTCTC-GCTG CAACT CAGCAGCGAAGTTCGG GCACTGAAACGTAAT mqo 978553 - 980199 + | malate dehydrogenase, FAD/NAD(P)-binding domain TERM 1317 980249 - 980222 - T 100 -18.6 -4.11216 | opp_overlap 980226, overlap 980226 TCCGCAGCGTTAAAA CAAACCCTCACC GATT GGTGAGGGTTTG GCGTGTTGACCGGAT TERM 1318 980245 - 980226 - T 100 -13.6 -4.65933 | opp_overlap 980226, overlap 980222 CAGCGTTAAAACAAA CCCTCACC GATT GGTGAGGG TTTGGCGTGTTGACC TERM 1319 980226 - 980245 + T 100 -13.6 -3.66803 | opp_overlap 980226 980222 CAGCGTTAAAACAAA CCCTCACC GATT GGTGAGGG TTTGGCGTGTTGACC glnQ 981004 - 980282 - | glutamine transporter subunit ; ATP-binding component of ABC superfamily glnP 981660 - 981001 - | glutamine transporter subunit ; membrane component of ABC superfamily TERM 1320 981731 - 981705 - R 86 -11.6 -3.35327 | gap 1 ATCAAATTTTCACAA GCCCGGTCAGC ACAACG GCTG-CCGGGC AAGACGTTGCAAAAC glnH 982500 - 981754 - | glutamine transporter subunit ; periplasmic binding component of ABC superfamily TERM 1321 982865 - 982844 - R 100 -12.3 -5.92337 | opp_overlap 982842 AGACAGTAAAAAAAA CGGCCTCCT GAAC AGGAAGCCG CAATTCTTACTCACT TERM 1322 982892 - 982904 + r 73 -5.5 -4.7268 | CACTACAATCTTCAT CCGTT AGC GACGG TTTTATTCGATATTT dps 983410 - 982907 - | Fe-binding and storage protein TERM 1323 983693 - 983659 - R 93 -8.7 -4.43283 | opp_overlap 983659 983658, overlap 983661 983663 GTATATAAAGAGAAA TATATCTGCATGGTT ATGCA AACCATGCAGAAAAA GTTATTTAATTGACA TERM 1324 983691 - 983661 - R 95 -11.3 -3.8077 | opp_overlap 983659 983658, overlap 983659 983663 ATATAAAGAGAAATA TATCTGCATGGTT ATGCA AACCATGCAGAAA AAGTTATTTAATTGA TERM 1325 983689 - 983663 - R 100 -13.9 -3.46525 | opp_overlap 983659 983658, overlap 983661 983659 ATAAAGAGAAATATA TCTGCATGGTT ATGCA AACCATGCAGA AAAAGTTATTTAATT rhtA 984586 - 983699 - | threonine and homoserine efflux system TERM 1326 983951 - 983922 - G 70 -10.1 -3.18383 | gap 1, overlap 983941 ATCTCCAGTGAGTAA GGCAG-TGCCGT TGAGAGT ACGGCAACTGCC AGGCCGAGTGGAATC TERM 1327 984258 - 984248 - G 78 -5.4 -4.81212 | GCGACGAGAAGAAAA CAGT GCT ACTG CCAGAGGGCCGGTGA ompX 984937 - 985452 + | outer membrane protein TERM 1328 985477 - 985495 + T 100 -8.1 -5.76949 | opp_overlap 985477 CGGTGATATAAAAAA TCCGCCT CTTGT GGGCGGA TTTTTTTTACAGCTA TERM 1329 985495 - 985477 - T 91 -7.4 -5.36441 | opp_overlap 985477 CGGTGATATAAAAAA TCCGCC TCTTGTG GGCGGA TTTTTTTTACAGCTA ybiP 987127 - 985520 - | putative enzyme, UPF0141 family, inner membrane TERM 1330 985701 - 985679 - G 71 -3.4 -4.84359 | overlap 985690 CCACTGCGAGAAAAA GCTCAGAAAA TCA TTCGCTGAAC GGCGGGCTTTGATTT TERM 1331 987072 - 987041 - G 85 -7.2 -4.77757 | gap 1, overlap 987036 987042 CTGCAAAAAGTAAAA CCCGGTCCACGGGCT TAA AACCCGGCGAC-GGG AGATTAGAGACTCTT TERM 1332 987142 - 987122 - G 70 -3.9 -4.63527 | CCAGTATCGCAAAAA CGCCATG TGCTAAC CCTGGCG CCAAGGGTCAAAACC TERM 1333 987350 - 987373 + r 72 -8.1 -3.8709 | overlap 987338 987352 TAACCTGGCAGTGAG GAGCGGCGT ACCGCG ACGCCGCTA TTTATCGGAAGGTTT TERM 1334 987352 - 987371 + r 83 -10.7 -3.52113 | overlap 987350 987338 ACCTGGCAGTGAGGA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT EFER_0959 987499 - 987371 - | hypothetical protein mntR 987685 - 988152 + | DNA-binding transcriptional regulator of mntH TERM 1335 988167 - 988186 + G 93 -3.5 -5.51165 | overlap 988142 988168 AGTTTTCCTCTTTTA CGATCGC TTCAGC GCGATCA TTTTTTTCAACTTTT TERM 1336 988410 - 988422 + G 81 -9.1 -4.04319 | ATGTTTATGGTACTT GCAGC GGC GCTGC TTTCTACCTTTCTGA ybiR 988149 - 989264 + | putative transporter TERM 1337 989301 - 989283 - T 100 -8.8 -5.63517 | opp_overlap 989283 CTGGCAAATAAAAAA GGCGGATT ATC AGTCCGCC TTTTACATTCAGTCA TERM 1338 989283 - 989301 + T 100 -11 -4.28774 | opp_overlap 989283 CTGGCAAATAAAAAA GGCGGATT ATC AGTCCGCC TTTTACATTCAGTCA ybiS 990244 - 989324 - | hypothetical protein ybiT 990463 - 992055 + | putative transporter fused subunits of ABC superfamily: ATP-binding components TERM 1339 992095 - 992060 - T 95 -14.3 -2.57244 | gap 1, opp_overlap 992063, overlap 992056 GGATCGAGTAAGTTA TTGTCAGTAGCCCTGA TATGG TCAGGGCTACTGA-AA CTGATGACAAATGCA ybiV 993069 - 992254 - | type II HAD phosphatase ybiW 995647 - 993215 - | putative glycyl radical cofactor protein TERM 1340 993502 - 993514 + g 71 -9.1 -3.53012 | opp_overlap 993500 CGCCGCCGAGAATTG CTGCC GTA GGCAG TTTACCCACCGAGCC ybiY 996579 - 995653 - | putative AdoMet-dependent glycyl radical activating enzyme TERM 1341 995918 - 995931 + g 79 -3.7 -5.11033 | ATGATGATTTTTTTC CCCGC CGCA GCGAG TTTTTTCAGGTTATC fsaA 996683 - 997345 + | fructose-6-phosphate aldolase 1 moeB 998181 - 997432 - | molybdopterin synthase sulfurylase TERM 1342 997559 - 997512 - G 81 -13.5 -2.63596 | opp_overlap 997502 997520 TCGCATCGTACATCA CGATTTTACCGCTGGCAGGTT TGCCAT AACCTGCCAGCAGTTTGATCG CTTCCATTGCCTGCA TERM 1343 997520 - 997551 + g 100 -14.5 -3.79668 | opp_overlap 997512 TACATCACGATTTTA CCGCTGGCAGGTT TGCCAT AACCTGCCAGCAG TTTGATCGCTTCCAT moeA 999416 - 998181 - | molybdopterin biosynthesis protein TERM 1344 998719 - 998709 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGTGGATCGT TERM 1345 999325 - 999313 - G 70 -5.5 -4.36063 | AGAATACGACCAAAA CACTG TAC CAGCG GCAATGTCTCAACGG TERM 1346 1000824 - 1000861 + G 73 -3.5 -4.85782 | gap 1 GTATTGATTTGTTAT CTGATTATCA-GTTGCAG CCG TTGCGTCGTGATATTCAG TTTATTTTTCAGGAC TERM 1347 1000971 - 1000961 - g 85 -8.2 -4.51174 | TTACTACAAGGAAAA GCGG CAG CCGC ACGTGTTGCAGAGCT yliA 999629 - 1001521 + | putative peptide transport fused subunits of ABC superfamily: ATP-binding components TERM 1348 1002175 - 1002157 - g 82 -3 -5.2696 | overlap 1002158 GTAAAAGTGAAAAAA TTTGCCGG GTA CTGGCAAC AAGGTCTGCCGAAGC yliB 1001548 - 1003086 + | putative peptide transporter subunit: periplasmic-binding component of ABC superfamily TERM 1349 1003144 - 1003174 + G 95 -6.9 -5.38958 | gap 1, overlap 1003145 CCTGCTGGGGCTGAT C-CCAACACTGCTG ATTG TGGCGGTGTTGGTG TTTTTATTTGTCCAT TERM 1350 1003145 - 1003172 + G 93 -10.6 -4.31946 | overlap 1003144 CTGCTGGGGCTGATC CCAACACTGCTG ATTG TGGCGGTGTTGG TGTTTTTATTTGTCC yliC 1003106 - 1004026 + | putative peptide transporter permease subunit: membrane component of ABC superfamily TERM 1351 1004377 - 1004387 + G 72 -6.8 -4.22591 | overlap 1004366 GTTCTGTCAGGCGCG GTGC CCG GCAC TTTATTGGGGTTGTT yliD 1004029 - 1004940 + | putative peptide transporter permease subunit: membrane component of ABC superfamily EFER_0974 1005071 - 1007419 + | hypothetical protein TERM 1352 1007675 - 1007691 + G 78 -10.9 -3.44444 | TTACGTACGGCATAT GGTGACA GCA TGTCACC TTCCTATCTTTATGA TERM 1353 1008306 - 1008290 - g 74 -2.3 -5.07567 | overlap 1008291 1008293 GCAGATGTCAAAAAA CTATACA GCA TGTACAA CTCGGCGTTTCTCGA TERM 1354 1008437 - 1008427 - g 73 -4 -4.84529 | TGATAAATTCAAAAA TATC AAT GATA CCTTCGGACACTTAT yliF 1007429 - 1008757 + | putative diguanylate cyclase TERM 1355 1008788 - 1008768 - T 100 -14.7 -4.71708 | overlap 1008780 AATAATAAAGGAAAA CCCGGCGAA CAA CTCGCCGGG TCAGTGAGATTAAAC yliG 1010123 - 1008798 - | putative AdoMet-dependent methyltransferase, UPF0004 family TERM 1356 1009883 - 1009902 + g 72 -6.4 -4.43879 | TAGCCCCAAGGCAGC CGGTAACG ATCA CTTTACCG TTTTCATTCAATGCT TERM 1357 1010103 - 1010091 - G 73 -9.1 -3.61468 | opp_overlap 1010088 GCCTAATGAAACGAA GCCGA TTT TCGGC TGATGGGTTACTTTG bssR 1010351 - 1010734 + | biofilm regulator TERM 1358 1010738 - 1010755 + F 100 -12.7 -4.47271 | GCGCACGCGTAAGCC GGGGGAG GCAA CTCCCCC TTTTGGTTAAGTTTA TERM 1359 1011448 - 1011436 - g 76 -10.5 -3.33696 | opp_overlap 1011430 1011446 CCCTTCGTTAATCAA GCCGC TGT GCGGC CTGAGATCTGGTCTT yliI 1010836 - 1011948 + | PQQ-dependent aldose sugar dehydrogenase precursor (asd) yliJ 1012585 - 1011953 - | putative glutathione S-transferase dacC 1012826 - 1014028 + | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) deoR 1014873 - 1014076 - | DNA-binding transcriptional repressor TERM 1360 1014885 - 1014853 - G 78 -9.2 -3.9461 | opp_overlap 1014858, overlap 1014854 CCCTCTGAAGAATAA TTTAAGCGCGCAGT CGAAC ACTGAGCGCTTAAT ACTACACGTATTACC TERM 1361 1014884 - 1014854 - G 78 -12.7 -2.96444 | opp_overlap 1014858, overlap 1014853 CCTCTGAAGAATAAT TTAAGCGCGCAGT CGAAC ACTGAGCGCTTAA TACTACACGTATTAC ybjG 1015514 - 1014906 - | undecaprenyl pyrophosphate phosphatase TERM 1362 1015821 - 1015807 - g 70 -6.4 -4.28375 | opp_overlap 1015819, overlap 1015819 CGAATAGATGCAAAA CCGATT ACA AACCGG CGCACGACTGGGGCG TERM 1363 1016771 - 1016797 + G 74 -10.2 -3.5013 | overlap 1016787 1016794 TTAAGTATCTATGCT TTTGGTATTGGC CTG GCCAATGCCGGA TTGGTTCGTTTGACC cmr 1015799 - 1017031 + | multidrug efflux system protein TERM 1364 1017037 - 1017063 + T 76 -10.9 -2.57136 | opp_overlap 1017037, overlap 1017036 GAAAGCTTAATGAAA TGCCTGATAGC ACAAA GCGATCAGGCA CTTAATGATTAATGG TERM 1365 1017063 - 1017037 - T 90 -10.9 -3.9444 | opp_overlap 1017037 1017036 GAAAGCTTAATGAAA TGCCTGATAGC ACAAA GCGATCAGGCA CTTAATGATTAATGG ybjH 1017350 - 1017072 - | hypothetical protein ybjI 1018269 - 1017454 - | putative phosphatase ybjJ 1019477 - 1018269 - | putative transporter TERM 1366 1019044 - 1019065 + g 90 -7.9 -4.75472 | opp_overlap 1019044 CCGAAGCTGTAGAAA CCGTGCATC ATGG GGAGCACGG TTTTATTCATCTCAC TERM 1367 1019957 - 1019939 - g 78 -8.8 -4.20106 | AAAGGTCATGCAAAA CTGGATGC ACA GCAGCCAG CAGACGTTGCAACAG ybjK 1019565 - 1020104 + | putative DNA-binding transcriptional regulator EFER_0988 1020204 - 1020422 + | hypothetical protein EFER_0989 1020824 - 1020585 - | hypothetical protein TERM 1368 1020924 - 1020888 - R 84 -3.7 -5.4833 | TCAGGCAACAAAAAA CCCATCAACCTTG AACCAAAACGG CGGGGTTGATGGG CTCCACAAATTGGGG ybjL 1022722 - 1021037 - | putative transporter ybjM 1022991 - 1023380 + | conserved hypothetical protein; putative inner membrane protein nfsA 1023545 - 1024267 + | nitroreductase A, NADPH-dependent, FMN-dependent TERM 1369 1024267 - 1024287 + F 73 -7.5 -4.19276 | overlap 1024283 TTGGGCGACGCGTTA GCCAGTGTA TGA TACGCAGGC TTTTGCCAGTTTTGA TERM 1370 1024790 - 1024824 + G 89 -13.6 -3.16668 | opp_overlap 1024801, overlap 1024801 GGCAGAAACGCGGCA GGCTGCAGAAAGTGTC ATT GACGCTTTTCGCGGCC TTAATGCGCATATTC TERM 1371 1025145 - 1025134 - g 77 -5.8 -4.62471 | opp_overlap 1025133 AAGGGATAGAGAAAA CCAC AGGT GTGG ATATTGCAGGCAAAA rimK 1024317 - 1025219 + | ribosomal protein S6 modification protein TERM 1372 1025231 - 1025252 + F 73 -5.8 -4.44608 | overlap 1025232 ATAAGCGTAATATCG TGCCGGAT CATAGC ATCCGGCC TTCTTTTTACGTAAG TERM 1373 1025232 - 1025251 + F 74 -9.3 -3.26042 | overlap 1025231 TAAGCGTAATATCGT GCCGGAT CATAGC ATCCGGC CTTCTTTTTACGTAA ybjN 1025308 - 1025784 + | hypothetical protein TERM 1374 1025801 - 1025825 + F 79 -10.7 -3.03635 | AATTGTTCTCGTATC CGCAGTCGC CACCGAA GCGGCTGCG TGTTGCAAACGTTTA TERM 1375 1026078 - 1026060 - f 86 -3.2 -5.60993 | opp_overlap 1026060 GCGCCGATAAAAAAA TATGCA CGTTTAT TGCATA TCTTTGATTGTGACA TERM 1376 1026100 - 1026117 + F 71 -8.5 -3.53012 | ATTGTGACAACTTTT GTTCGTT TGTT AACGAAC TTTCAGAAGGAAAGA potF 1026136 - 1027248 + | putrescine transporter subunit: periplasmic-binding component of ABC superfamily potG 1027343 - 1028476 + | putrescine transporter subunit: ATP-binding component of ABC superfamily potH 1028486 - 1029439 + | putrescine transporter subunit: membrane component of ABC superfamily TERM 1377 1029977 - 1029987 + G 71 -3.2 -4.81083 | opp_overlap 1029952 ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTCGTCATTACG potI 1029436 - 1030281 + | putrescine transporter subunit: membrane component of ABC superfamily TERM 1378 1030311 - 1030335 + F 100 -12.2 -4.25104 | opp_overlap 1030314, overlap 1030314 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG TERM 1379 1030314 - 1030332 + F 100 -11.7 -4.25256 | opp_overlap 1030314, overlap 1030311 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG TERM 1380 1030332 - 1030314 - f 89 -11.7 -3.48772 | opp_overlap 1030311 1030314 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG ybjO 1030341 - 1030829 + | conserved hypothetical protein; putative inner membrane protein rumB 1030870 - 1031997 + | 23S rRNA m(5)U747 methyltransferase TERM 1381 1032015 - 1032002 - T 100 -9.5 -5.5604 | opp_overlap 1032002 TGAAGCAATAAAAAA GCCGC GGCT GCGGC TTTCTGAATCTTACT TERM 1382 1032002 - 1032015 + T 83 -9.5 -3.98172 | opp_overlap 1032002 TGAAGCAATAAAAAA GCCGC GGCT GCGGC TTTCTGAATCTTACT artJ 1032757 - 1032026 - | arginine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1383 1032375 - 1032399 + g 77 -7.2 -4.46757 | TTTTCCATCCCAATG CGTTTGCC TTTCAGGTC GGCAAACG TTTTGTAGGTATCTT TERM 1384 1032880 - 1032906 + r 100 -13.8 -4.4768 | opp_overlap 1032880 TAATGAATAAAAAAA GACGGACAACTT AGT GGGTTGTCCGTC TTTATTATATTAATC TERM 1385 1032906 - 1032880 - R 100 -12.4 -5.87996 | opp_overlap 1032880 TAATGAATAAAAAAA GACGGACAAC TTAGTGG GTTGTCCGTC TTTATTATATTAATC artM 1033652 - 1032984 - | arginine transporter subunit ; membrane component of ABC superfamily artQ 1034368 - 1033652 - | arginine transporter subunit ;membrane component of ABC superfamily TERM 1386 1034324 - 1034314 - G 74 -8.2 -3.99898 | opp_overlap 1034320, overlap 1034315 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 1035106 - 1034375 - | arginine transporter subunit ; periplasmic-binding component of ABC superfamily artP 1035852 - 1035124 - | arginine transporter subunit ; ATP-binding component of ABC superfamily TERM 1387 1036039 - 1036011 - R 80 -9 -3.96148 | gap 1, opp_overlap 1036010 1036011 GGCGGCGAGCATAAA TGT-CGGCATTCC TCGC GAAATGCCGGACA ATTTACGGGGGTTAT ybjP 1036585 - 1036070 - | conserved hypothetical protein, putative exported protein ybjQ 1036711 - 1037034 + | hypothetical protein ybjR 1037031 - 1037861 + | putative cell wall amidase and lipoprotein ybjS 1038871 - 1037858 - | putative NAD(P)H-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 1388 1037994 - 1038022 + g 78 -8 -4.30978 | opp_overlap 1037994 1037998 TCAAAATTCAACTTA GAGACGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 1040400 - 1038970 - | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain TERM 1389 1039093 - 1039065 - G 83 -13.2 -2.99951 | overlap 1039062 GTAACCAGTAAATCA GCCCTGGCATCC CATGC GGATGCCAGAAC GCGCGAACATCGATG TERM 1390 1039180 - 1039191 + g 72 -4.4 -4.66833 | opp_overlap 1039180 TTTCATGCCAAATAA CAAC GCAA GTTG TTTTTCCGGTTCGAC TERM 1391 1039487 - 1039500 + g 86 -3.8 -5.40014 | TCGTATCCCCAGTCG CTGG AGTTGA CCAG TTTTTCTTCTTCTTT ltaE 1041412 - 1040411 - | L-allo-threonine aldolase, PLP-dependent poxB 1043167 - 1041449 - | pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding EFER_1016 1043319 - 1043753 + | hypothetical protein TERM 1392 1043805 - 1043779 - T 84 -10.8 -3.6502 | opp_overlap 1043780, overlap 1043780 TACTGTCCATTTAAA GCTGCCCGGC GAATTGT GCCGGGCAGT TATCTTTACGCGAGA TERM 1393 1043780 - 1043804 + T 100 -15 -3.81488 | opp_overlap 1043779 1043780 ACTGTCCATTTAAAG CTGCCCGGCG AATTG TGCCGGGCAG TTATCTTTACGCGAG TERM 1394 1043804 - 1043780 - T 95 -14.3 -2.78798 | opp_overlap 1043780, overlap 1043779 ACTGTCCATTTAAAG CTGCCCGGC GAATTGT GCCGGGCAG TTATCTTTACGCGAG hcr 1044779 - 1043811 - | HCP oxidoreductase, NADH-dependent hcp 1046443 - 1044791 - | hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases TERM 1395 1046251 - 1046237 - G 78 -5.6 -4.83615 | overlap 1046238 1046239 CAGGGTTGAGAAAAA TGCGCG CGG CGCGAA GCTGTCAACGTCATG TERM 1396 1046617 - 1046602 - R 71 -3.2 -4.99035 | overlap 1046604 TTATGCAGAGAAAAA GGCGAT GAGG ATCGGC ACTAACAGGCTAAGA ybjE 1047486 - 1046587 - | putative transporter EFER_1020 1047825 - 1048850 + | putative transposase, IS110 family TERM 1397 1048875 - 1048833 - f 95 -12.7 -3.39187 | overlap 1048856 AATACTGAATATCAA CCTCGGCAGCTCGCCTGAC ACAAG GTCAGTCAATCTGACGAGG TGCTGAAAAAAAGTT TERM 1398 1049170 - 1049186 + G 70 -3.5 -4.63218 | overlap 1049171 AGGGATAAGTCGAGG GCACCGC GCA GCGGCGA TTTTGTTCGCCAGAG EFER_1021 1049101 - 1049277 + | hypothetical protein TERM 1399 1049355 - 1049337 - T 100 -8.8 -6.09133 | opp_overlap 1049337 1049336 CATTTTAAAAAAAAA GCCTGACA TTG CGCCAGGC CTTCTGCGTTAATTA aqpZ 1050063 - 1049368 - | aquaporin TERM 1400 1049956 - 1049938 - G 83 -12.4 -3.28269 | opp_overlap 1049953 AACGGTCAAACCGAA TGCCAGCG CCA CGCCGGCA AAACCAATGCCTAAT ybjD 1050485 - 1052143 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain EFER_1024 1053147 - 1052140 - | hypothetical protein EFER_1025 1053218 - 1053093 - | hypothetical protein macA 1053252 - 1054367 + | macrolide transporter subunit, membrane fusion protein (MFP) component macB 1054364 - 1056310 + | fused macrolide transporter subunits of ABC superfamily: ATP-binding component ; membrane component TERM 1401 1056469 - 1056499 + T 100 -12.7 -3.70149 | opp_overlap 1056474, overlap 1056474 GCAAGAAACAGAAAT AAAAATGCCAGCC GATGG GGCTGGCATTTTG TTTGAGTGATGTACA TERM 1402 1056474 - 1056494 + T 100 -12.6 -4.9138 | opp_overlap 1056474, overlap 1056469 AAACAGAAATAAAAA TGCCAGCC GATGG GGCTGGCA TTTTGTTTGAGTGAT TERM 1403 1056494 - 1056474 - T 100 -12.6 -5.48623 | opp_overlap 1056469 1056474 AAACAGAAATAAAAA TGCCAGCC GATGG GGCTGGCA TTTTGTTTGAGTGAT cspD 1056752 - 1056531 - | cold shock protein homolog TERM 1404 1056570 - 1056581 + g 70 -5.8 -4.28548 | GGGTACAATGACGCT GGCA TGAT TGCC TTTTGGTCCCTGAGT TERM 1405 1057187 - 1057197 + G 77 -6.8 -4.45738 | opp_overlap 1057187 TCAATGATGATTACA CTCC GAT GGAG TTTGTTATTGACGTG clpS 1057075 - 1057395 + | regulatory protein for ClpA substrate specificity TERM 1406 1057403 - 1057390 - f 86 -8.1 -4.58395 | TGTACGCTGGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1407 1058235 - 1058224 - g 77 -5.8 -4.59773 | opp_overlap 1058224 GGTGACTTTGAAAAA CGCT TTAA AGCG TTGCTCAAACAACTG TERM 1408 1059588 - 1059571 - g 77 -3.3 -5.11033 | opp_overlap 1059573, overlap 1059573 GACAACCTGAAAAAA CCGCTCG CTAA CGAACTG CTGTTTGGTTCGCTG clpA 1057411 - 1059705 + | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity TERM 1409 1059731 - 1059758 + T 100 -12.8 -5.38054 | opp_overlap 1059731 AGGTAGGATGATGAA GTCCGTAATCTC GTCA GGGGTTACGGAC TTTTTGTTTATGGGG TERM 1410 1060074 - 1060097 + T 83 -9.6 -3.98913 | opp_overlap 1060076, overlap 1060076 TAAAATGCGAAAAAA AAGCTCGTAC TTTC GTACGAGCTC TTCTTTAAATATGGC TERM 1411 1060095 - 1060076 - T 100 -12.2 -5.82388 | opp_overlap 1060076 1060074 AAATGCGAAAAAAAA GCTCGTAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1412 1060076 - 1060095 + T 93 -12.2 -3.58256 | opp_overlap 1060076, overlap 1060074 AAATGCGAAAAAAAA GCTCGTAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1413 1060407 - 1060391 - T 100 -10.1 -5.56263 | opp_overlap 1060391 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACGCATTCTTT TERM 1414 1060391 - 1060407 + T 76 -7.9 -4.17523 | opp_overlap 1060391 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACGCATTCTTT infA 1060668 - 1060450 - | translation initiation factor IF-1 TERM 1415 1060804 - 1060794 - R 71 -8.2 -3.40622 | overlap 1060792 TACTCCGAAAACACA CGGC TAA GCCG CACCAAAAGCGCAAC aat 1061657 - 1060953 - | leucyl/phenylalanyl-tRNA-protein transferase TERM 1416 1061534 - 1061522 - G 71 -2.7 -4.7329 | overlap 1061525 AAAACCACGGAAAAA TACCA CGC TGATA AGCCATTAACAGGCG cydC 1063420 - 1061699 - | fused cysteine transporter subunits of ABC superfamily: membrane component ; ATP-binding component cydD 1065187 - 1063421 - | fused cysteine transporter subunits of ABC superfamily: membrane component ; ATP-binding component TERM 1417 1064594 - 1064577 - G 75 -5.5 -4.71828 | AGGCGATCAAGAAAA TGCCCAC TTAA GCGAGCA AGAGCGAGAAAGTTA TERM 1418 1065284 - 1065250 - R 84 -6.5 -5.06103 | gap 1, opp_overlap 1065251 1065254, overlap 1065254 ACAACGGGGAAAAAA TAAAGGCGAC-CCATA GTCG CATGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1419 1065251 - 1065283 + r 75 -7.1 -4.33854 | gap 1, opp_overlap 1065250 1065254, overlap 1065254 CAACGGGGAAAAAAT AAAGGCGAC-CCAT AGTCGC ATGGTGTCGCCTTC TTTACTTTTGTTACT TERM 1420 1065254 - 1065280 + r 86 -8.8 -4.25231 | gap 1, opp_overlap 1065254 1065250, overlap 1065251 CGGGGAAAAAATAAA GGCGAC-CCAT AGTCGC ATGGTGTCGCC TTCTTTACTTTTGTT TERM 1421 1065280 - 1065254 - R 100 -9.5 -5.04249 | gap 1, opp_overlap 1065251 1065254, overlap 1065250 CGGGGAAAAAATAAA GGCGAC-CCATA GTCG CATGGTGTCGCC TTCTTTACTTTTGTT trxB 1066275 - 1065310 - | thioredoxin reductase, FAD/NAD(P)-binding TERM 1422 1065558 - 1065592 + g 70 -4.2 -4.60797 | opp_overlap 1065524 1065558 1065560 1065561, overlap 1065560 1065561 1065567 CGATAGCCACAAACA GACCGGCAACGTCGAG TGA CTCGATGTTATCGCTG TTTTGTGTATCGCGC TERM 1423 1066138 - 1066155 + g 81 -6.9 -4.66163 | overlap 1066114 TTCCACTTCCGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT TERM 1424 1066569 - 1066557 - H 70 -2.7 -4.96435 | GGAAGAAAAAAATAA CATCA GGT TGATA CTGCATAACCATGCA TERM 1425 1067120 - 1067105 - g 77 -6.2 -4.62336 | ACCGCAGTGCAAAAA CTTGAA GAAA TTCAAG AGTGTCATCTAGTAT lrp 1066808 - 1067302 + | DNA-binding transcriptional dual regulator, leucine-binding TERM 1426 1067356 - 1067392 + F 100 -11.6 -4.13767 | gap 1, opp_overlap 1067358 1067362 1067376, overlap 1067359 1067362 TCCTGTTAATCCATA CAG-CAACAGTGCCGGG GAAA CCCGGTGCTGTTGTCCG TTTTAGCATCGGGCA TERM 1427 1067359 - 1067388 + F 100 -16.5 -2.75577 | opp_overlap 1067358 1067362 1067376, overlap 1067356 1067362 TGTTAATCCATACAG CAACAGTGCCGGG GAAA CCCGGTGCTGTTG TCCGTTTTAGCATCG TERM 1428 1067362 - 1067385 + F 100 -12.4 -3.52113 | opp_overlap 1067362 1067358 1067376, overlap 1067359 1067356 TAATCCATACAGCAA CAGTGCCGGG GAAA CCCGGTGCTG TTGTCCGTTTTAGCA TERM 1429 1069070 - 1069060 - g 86 -6.8 -5.00616 | overlap 1069064 TCTGGCGTGAAAAAA GCCA CGC TGGC GACAGGGGAGGCGGC TERM 1430 1069268 - 1069258 - g 77 -3.2 -5.06414 | GCTGCCGAAGAAAAA GCTC GCG AAGC ACAGCGTCGACAGTA TERM 1431 1069381 - 1069361 - g 72 -7.5 -3.86897 | GTCAGTTCGCACAAA CGCAACAGC AAC GCTATGGCG AACAATACCAACATG ftsK 1067437 - 1071282 + | DNA-binding membrane protein required for chromosome resolution and partitioning lolA 1071438 - 1072052 + | chaperone for lipoproteins ycaJ 1072063 - 1073406 + | recombination protein TERM 1432 1074345 - 1074379 + G 70 -10.8 -2.70932 | CCGTGGTCTGATCCG TATGCACCAGTTCGAC AAA GTTGAAATGGTGCAGA TCGTTCGCCCGGAAG serS 1073497 - 1074789 + | seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine TERM 1433 1074841 - 1074814 - T 100 -12.9 -3.60475 | opp_overlap 1074814 AACGCTGATCTGAAA GCTGGTTACTT GCAAGG AAGTAACCAGC TTTTTTTATTTCTGT TERM 1434 1074814 - 1074841 + T 100 -12.9 -6.04953 | opp_overlap 1074814 AACGCTGATCTGAAA GCTGGTTACTT GCAAGG AAGTAACCAGC TTTTTTTATTTCTGT ycaC 1075473 - 1074847 - | putative hydrolase TERM 1435 1075499 - 1075522 + H 100 -14 -4.25256 | TGTAAGAGTTTGCCT GTCACCTGAA ATAT TTCAGGTGAC TTGTTTTCATCAAAA TERM 1436 1076709 - 1076739 + G 100 -15.6 -3.43338 | overlap 1076710 CCCTGTCGCTATGGC CTGGTCTTGCGAAA AAG TTTCGCAAGACCAA TTAGTTGCTATGAAT TERM 1437 1076710 - 1076738 + G 100 -19.1 -2.65521 | overlap 1076709 CCTGTCGCTATGGCC TGGTCTTGCGAAA AAG TTTCGCAAGACCA ATTAGTTGCTATGAA ycaD 1075786 - 1076934 + | putative MFS-type transporter protein ycaM 1077142 - 1078572 + | putative transporter TERM 1438 1078577 - 1078613 + T 86 -8.1 -4.68593 | gap 1, overlap 1078579 1078580 ATAGTGAATAATCGT TGTGGTCAGTTCTGCT AAGTCG GGCAGAGCTGACC-CG TTTTTACATAATCGA TERM 1439 1078579 - 1078612 + T 76 -9.6 -3.40674 | overlap 1078577 1078580 AGTGAATAATCGTTG TGGTCAGTTCTGCT AAGTCG GGCAGAGCTGACCC GTTTTTACATAATCG TERM 1440 1078580 - 1078611 + T 91 -13.1 -2.63922 | overlap 1078579 1078577 GTGAATAATCGTTGT GGTCAGTTCTGCT AAGTCG GGCAGAGCTGACC CGTTTTTACATAATC TERM 1441 1078773 - 1078742 - T 82 -10.2 -3.62597 | opp_overlap 1078746, overlap 1078746 TGCAGTGCGGAATAA CAAAGCGGCGACTC AATA AAGTTGCCGCTTTA CCGGAAAATTAGAAC TERM 1442 1078769 - 1078746 - T 93 -8.8 -4.44667 | opp_overlap 1078746, overlap 1078742 GTGCGGAATAACAAA GCGGCGACTC AATA AAGTTGCCGC TTTACCGGAAAATTA TERM 1443 1078746 - 1078769 + T 80 -10.3 -3.53761 | opp_overlap 1078742 1078746 GTGCGGAATAACAAA GCGGCGACT CAATAA AGTTGCCGC TTTACCGGAAAATTA pflA 1079522 - 1078782 - | pyruvate formate lyase activating enzyme 1 TERM 1444 1079213 - 1079231 + g 71 -2.5 -5.00616 | gap 1, opp_overlap 1079217, overlap 1079217 AACCGTTAGTGTCCA GACAGGTA TGAA TACCT-TC TTTTTTGCAGGCGCG TERM 1445 1079217 - 1079228 + g 72 -4.4 -4.61482 | opp_overlap 1079217, overlap 1079213 GTTAGTGTCCAGACA GGTA TGAA TACC TTCTTTTTTGCAGGC TERM 1446 1079345 - 1079328 - G 72 -7.7 -3.93136 | opp_overlap 1079328 AGATGCATTCATAAA GTGGCGA TAGG TCACCAC CTCTTTCATTAAATC TERM 1447 1079672 - 1079653 - R 100 -11.4 -5.41143 | opp_overlap 1079653 CACTGGTTAAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACTCGTT TERM 1448 1079653 - 1079672 + r 88 -9.2 -4.37157 | opp_overlap 1079653 CACTGGTTAAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACTCGTT pflB 1081997 - 1079715 - | pyruvate formate lyase I focA 1082910 - 1082053 - | formate transporter TERM 1449 1083080 - 1083065 - R 75 -3.4 -5.11063 | opp_overlap 1083051, overlap 1083071 ATTATTTAATAAAAA TAAATT TTAA AATTTA ATAAATCAGTTGAAT TERM 1450 1083202 - 1083169 - R 83 -9.2 -3.99444 | gap 1, opp_overlap 1083179, overlap 1083170 AACAACATTGATAAA TCTGGTTAAATATTG AATAA CAATATTTAACC-GA GTAACTACATTTATT TERM 1451 1083203 - 1083170 - R 71 -9.2 -2.98582 | gap 1, opp_overlap 1083179, overlap 1083169 ACAACATTGATAAAT CT-GGTTAAATATTG AATAA CAATATTTAACCGAG TAACTACATTTATTT TERM 1452 1083262 - 1083244 - R 100 -12.4 -4.67968 | opp_overlap 1083243 TTAATAAACAAGAAA GGGGCACA AAA TGCGCCCC GTAATATAGCTCAGA ycaO 1085075 - 1083315 - | hypothetical protein TERM 1453 1084861 - 1084877 + g 79 -2.2 -5.26875 | gap 1, overlap 1084860 1084871 AAATATTCACCGAGG GCGGATG CCAG CG-CCGC TTTTTTGGTTGCGCC TERM 1454 1085231 - 1085248 + G 77 -6.3 -4.62054 | CGATCTCCACCGTAT GGCATTT GATA AAGTGCC TTTTGATTTCCTTGG TERM 1455 1085339 - 1085352 + G 77 -5.9 -4.66953 | overlap 1085350 CGGAAGACGCGGTGT GCGGC AGAT GTCGC TTTTTGAAGTGTTAA ycaP 1085205 - 1085897 + | conserved hypothetical protein; putative inner membrane protein serC 1086087 - 1087175 + | 3-phosphoserine/phosphohydroxythreonine aminotransferase TERM 1456 1087196 - 1087214 + F 100 -11 -5.42975 | CTATTCTTATTATTA CCCACAGT TAT GCTGTGGG TTTTTGTTTCTGTCG aroA 1087218 - 1088522 + | 5-enolpyruvylshikimate-3-phosphate synthetase TERM 1457 1088534 - 1088557 + F 100 -11 -4.51174 | overlap 1088535 ATAAACTCAGCCTTA CCACCGCATC ATCC GATGCGGTGA TTTTCGTTCTCGTGA TERM 1458 1088535 - 1088556 + F 100 -14.5 -3.29981 | overlap 1088534 TAAACTCAGCCTTAC CACCGCATC ATCC GATGCGGTG ATTTTCGTTCTCGTG TERM 1459 1089003 - 1089022 + G 78 -7.8 -4.35461 | opp_overlap 1089006 CAAGAAGTGGCGAAT GCAGCATC ACAA GTTGCTGC TTTTCCTCGTGTTCG TERM 1460 1089367 - 1089354 - g 70 -3.8 -4.68424 | overlap 1089363 1089365 CAAGTGATTGAAAAA GCGT TACAAT ACGC GCGCCAAAAACTGGC cmk 1088709 - 1089392 + | cytidylate kinase TERM 1461 1089677 - 1089667 - g 88 -8.2 -4.63527 | TGAGCAGTTCAAAAA CGCC CAG GGCG AAATTGAAATCCAGG rpsA 1089503 - 1091176 + | 30S ribosomal subunit protein S1 TERM 1462 1091187 - 1091208 + F 100 -13.1 -4.29929 | overlap 1091181 AGTAATTCTCTGACT CTTCGGGAT TTTT ATCCCGAAG TTTGTTGAGTTTACT TERM 1463 1091285 - 1091255 - f 95 -12.7 -3.33696 | gap 1, opp_overlap 1091262, overlap 1091258 1091262 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAACAACAGCA TERM 1464 1091283 - 1091258 - f 100 -15.5 -2.84098 | opp_overlap 1091262, overlap 1091255 1091262 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAACAACAG TERM 1465 1091279 - 1091262 - f 100 -14.1 -3.30554 | opp_overlap 1091262, overlap 1091258 1091255 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAACA TERM 1466 1091262 - 1091279 + F 100 -14.1 -3.18264 | opp_overlap 1091262 1091258 1091255 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAACA ihfB 1091336 - 1091620 + | integration host factor (IHF), DNA-binding protein, beta subunit TERM 1467 1091646 - 1091660 + F 100 -7.1 -5.62045 | opp_overlap 1091646 ACTTAATCGCGAAAA GCACC TAAGT GGTGC TTTTTTATTGTCTGT TERM 1468 1091660 - 1091646 - f 73 -7.1 -4.1466 | opp_overlap 1091646 ACTTAATCGCGAAAA GCACC TAAGT GGTGC TTTTTTATTGTCTGT TERM 1469 1092243 - 1092225 - g 72 -4.4 -4.58773 | overlap 1092227 TTGATGAAATTAAAA GTCCGTGC AGT GCATGGGC AACTAAATGATGGTG TERM 1470 1092746 - 1092762 + G 70 -6.5 -4.2558 | overlap 1092747 ATGGGACGTCTGGCT ATGCTGC CTT GCAGCAA TTTTAATAACCGATC TERM 1471 1092747 - 1092761 + G 70 -10 -3.15027 | overlap 1092746 TGGGACGTCTGGCTA TGCTGC CTT GCAGCA ATTTTAATAACCGAT EFER_1057 1091823 - 1094087 + | hypothetical protein msbA 1094124 - 1095872 + | fused lipid transporter subunits of ABC superfamily: membrane component ; ATP-binding component TERM 1472 1096681 - 1096711 + G 77 -12 -3.21099 | ACTTACGCACTCAGA TGTTTGCGCATTGT TGA ACAGTGGGCAAACA TTGGTCATGACCGAA lpxK 1095869 - 1096855 + | lipid A 4'kinase ycaQ 1096892 - 1098124 + | conserved hypothetical protein (N-terminal fragment) ycaR 1098177 - 1098359 + | hypothetical protein kdsB 1098356 - 1099102 + | 3-deoxy-manno-octulosonate cytidylyltransferase ycbJ 1099255 - 1100148 + | hypothetical protein ycbC 1100904 - 1100125 - | conserved hypothetical protein; putative inner membrane protein TERM 1473 1101586 - 1101571 - g 100 -2.4 -5.93252 | overlap 1101573 CCGAAAAAGAAAAAA CGGACG CTTT CGCCAG ATTATCCACGCGACC smtA 1101040 - 1101825 + | putative AdoMet-dependent methyltransferase TERM 1474 1102962 - 1102933 - g 70 -5.7 -4.36914 | gap 1, opp_overlap 1102960 TTGCCGTGTACAAAA CCAGA-CAAGTGCC GCT GGATCTTGGTCTGG TGGTACGCGAATATC mukF 1101822 - 1103144 + | Involved in chromosome partioning, Ca2+ binding protein TERM 1475 1103196 - 1103211 + G 70 -10.4 -3.17194 | GAATCCGTTATTTCC GGCGCT GGAT AGCGCC TTACGTTCAGGCCGT mukE 1103152 - 1103829 + | protein involved in chromosome partitioning TERM 1476 1105064 - 1105018 - g 70 -6.5 -4.15565 | gap 1, opp_overlap 1105010, overlap 1105022 TGGACGAGCTGAAAA GCCAGCTTGCT-GACTACCAGC AGGC GCTGGACGTCCAGCAAACGCGC GCTATCCAGTACAAC TERM 1477 1105216 - 1105201 - g 81 -4.7 -5.10497 | AAGCGACTGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC TERM 1478 1107223 - 1107209 - g 72 -8.5 -3.82202 | opp_overlap 1107220 CATGGTGAAAGATAA CGGCG TTGAG CGCCG CTTACACCGTCGTGA mukB 1103829 - 1108289 + | fused chromosome partitioning protein: putative nucleotide hydrolase ; conserved hypothetical protein ; conserved protein TERM 1479 1108297 - 1108314 + F 100 -12.7 -4.20868 | CAAGCTAAATCCCCA GGCGGCT GCAA AGCCGCC TTCTTCTTTTCCGAA TERM 1480 1109466 - 1109456 - g 90 -6.8 -5.12617 | GAACCACGCAAAAAA GCAG CTC CTGC AGTTCGGGCCGCCTA ycbB 1108532 - 1110379 + | putative exported enzyme ycbK 1110551 - 1111111 + | hypothetical protein ycbL 1111138 - 1111785 + | putative metal-binding hydrolase TERM 1481 1111817 - 1111799 - T 100 -11.7 -5.38951 | opp_overlap 1111795 1111799 AAGGCACATAAAAAA GCCCGCT TTCAC AGCGGGC TTCGTTTAACTAGTC TERM 1482 1111799 - 1111817 + T 89 -11.7 -3.55122 | opp_overlap 1111799, overlap 1111795 AAGGCACATAAAAAA GCCCGCT TTCAC AGCGGGC TTCGTTTAACTAGTC aspC 1113024 - 1111834 - | aspartate aminotransferase, PLP-dependent TERM 1483 1112852 - 1112871 + g 85 -2.8 -5.44721 | gap 1, opp_overlap 1112861, overlap 1112853 1112853 TTGGTAGTTTCATTT TC-GAGCAG ATA CTGCTCAGC TTTTTTTACGCTGGT TERM 1484 1113176 - 1113161 - R 100 -9 -5.64274 | opp_overlap 1113161 TCAGGTATAAAAAAA CAGGAC CAAC GTCCTG TTTTTTAGGCATTTA TERM 1485 1113161 - 1113176 + r 100 -9 -5.07107 | opp_overlap 1113161 TCAGGTATAAAAAAA CAGGAC CAAC GTCCTG TTTTTTAGGCATTTA ompF 1114278 - 1113208 - | outer membrane porin 1a (Ia;b;F) TERM 1486 1114716 - 1114700 - R 70 -5.1 -4.47686 | TGAGAAAAAACTAAA CCGCA ATAATTA TGCGG AATAATTTTTAATCA TERM 1487 1114867 - 1114849 - R 100 -10.3 -5.57054 | opp_overlap 1114849 AATAAGCGAAAAAAA GCCAGCA ACAGG TGCTGGC TTTTTGCATATGAAA TERM 1488 1114849 - 1114867 + r 100 -10.3 -4.70659 | opp_overlap 1114849 AATAAGCGAAAAAAA GCCAGCA ACAGG TGCTGGC TTTTTGCATATGAAA asnS 1116288 - 1114888 - | asparaginyl tRNA synthetase TERM 1489 1115148 - 1115162 + g 73 -4.2 -4.75308 | CCGGTGCCAGAACGT CCATTG CCG CAACGG TTTTTCCGTCTTCGT TERM 1490 1116447 - 1116429 - R 91 -8.1 -4.91084 | opp_overlap 1116427, overlap 1116423 1116421 AATAAAAGGCAAAAA GGGAGCC TTTAC GACTCCC TCTAAATTAACTGGC pncB 1117656 - 1116454 - | nicotinate phosphoribosyltransferase TERM 1491 1119963 - 1119953 - g 72 -6.8 -4.19472 | GAAGATATTGCAAAA CGCA CTC TGCG TAATGCCTGCCTGCG TERM 1492 1120464 - 1120452 - g 70 -4.7 -4.47328 | overlap 1120453 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAGCAGTTGAAAGG pepN 1117922 - 1120534 + | aminopeptidase N TERM 1493 1120538 - 1120575 + T 80 -9.8 -3.63589 | opp_overlap 1120542, overlap 1120539 1120569 1120570 GCTCTGGCTTGATAA ATAACCGAATGGCGGC AATAGC GCCGCCATTCGGGGAA TTTACCCCTGTTTTC TERM 1494 1120539 - 1120574 + T 93 -13.3 -2.77431 | opp_overlap 1120542, overlap 1120538 1120569 1120570 CTCTGGCTTGATAAA TAACCGAATGGCGGC AATAGC GCCGCCATTCGGGGA ATTTACCCCTGTTTT TERM 1495 1120571 - 1120542 - T 100 -20.1 -4.06419 | opp_overlap 1120539 1120538 1120569 1120570 TGGCTTGATAAATAA CCGAATGGCGGCA ATAG CGCCGCCATTCGG GGAATTTACCCCTGT ssuB 1121344 - 1120577 - | alkanesulfonate transporter subunit ; ATP-binding component of ABC superfamily ssuC 1122132 - 1121341 - | alkanesulfonate transporter subunit ; membrane component of ABC superfamily ssuD 1123289 - 1122144 - | alkanesulfonate monooxygenase, FMNH(2)-dependent TERM 1496 1122473 - 1122512 + g 73 -9.2 -3.60419 | gap 1, overlap 1122474 TATGTAGCGCCGCCA TTCGCTGTTGCCC-CACGG AAT CCGTGCGGGCAAACGCGGC TTGTGCTTTAGCGAT TERM 1497 1122474 - 1122511 + g 77 -12.7 -2.75769 | gap 1, overlap 1122473 ATGTAGCGCCGCCAT TCGCTGTTGCCC-CACGG AAT CCGTGCGGGCAAACGCGG CTTGTGCTTTAGCGA ssuA 1124245 - 1123286 - | alkanesulfonate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1498 1123330 - 1123342 + g 77 -3.3 -5.08824 | GCTGCCAGATGCGCT GGCGA ATA TCGAC TTTTTTCGGTACCAG ssuE 1124813 - 1124238 - | NAD(P)H-dependent FMN reductase pyrD 1125050 - 1126060 + | dihydro-orotate oxidase, FMN-linked TERM 1499 1126082 - 1126125 + F 100 -13.4 -3.406 | opp_overlap 1126089 1126092, overlap 1126089 TCTCCTTTTTAACGT TATGAGACAACCGGGGCT TTATTTCC AGCCCTGGTTGTTTTATA TTCCTTACCTGTTGC TERM 1500 1126118 - 1126089 - f 70 -9.3 -2.80994 | opp_overlap 1126082 1126089, overlap 1126092 TTTAACGTTATGAGA CAACCGGGGCT TTATTTCC AGCCCTGGTTG TTTTATATTCCTTAC TERM 1501 1126089 - 1126118 + F 100 -11.5 -4.73864 | opp_overlap 1126089 1126092, overlap 1126082 TTTAACGTTATGAGA CAACCGGGGCT TTATTTCC AGCCCTGGTTG TTTTATATTCCTTAC ycbW 1126234 - 1126776 + | hypothetical protein ycbX 1127882 - 1126773 - | putative 2Fe-2S cluster-containing protein TERM 1502 1126955 - 1126971 + g 74 -8.7 -3.90922 | GATTTTCTAATTGCT CCAGCAG AAC CTGTTGG TTATTTCCACGAAAT TERM 1503 1127363 - 1127380 + g 75 -5.5 -4.62069 | opp_overlap 1127354 1127355 CGGAAACCACCAGAT TGGGGCG GAAT TGCTCCA TTTTTACACTGGCCG ycbY 1127980 - 1130088 + | putative conserved AdoMet-dependent methyltransferase with RNA interaction domain uup 1130100 - 1132007 + | fused ATP-binding subunits of ABC superfamily protein involved in precise excision of transposons TERM 1504 1132535 - 1132551 + G 72 -4.3 -4.62069 | opp_overlap 1132535 GGTCCGTTTAAAAGA GCAACTG GCA CGGGTGC TTTTTCAACTCAAAA TERM 1505 1132590 - 1132609 + G 72 -7.8 -3.92178 | ATGGCGGAGATTTTC CTCGCCGG TGTG CTGGTGAG TTTCGTTAAACTGAT pqiA 1132137 - 1133384 + | paraquat-inducible membrane protein A TERM 1506 1134527 - 1134509 - g 70 -4.5 -4.56597 | opp_overlap 1134522 GTGGTTCCCTAAAAA CCGGCAA TCTTG TCACCGG CGCGTTGTATGTGGA pqiB 1133389 - 1135029 + | paraquat-inducible protein B ymbA 1135041 - 1135589 + | hypothetical protein TERM 1507 1135612 - 1135638 + F 100 -7.9 -6.02919 | opp_overlap 1135612 GATTTGTAAATATAA CCGTCTCCGGT TTGTT GCCTGAGGCGG TTTTTTTGTTTCTAA rmf 1135845 - 1136012 + | ribosome modulation factor TERM 1508 1136027 - 1136057 + T 77 -4.6 -4.93296 | opp_overlap 1136030 1136034, overlap 1136029 1136034 ATTCTGTCTCTTTAA AAAGAAACCTCCGT CTT GCGGAGGTTTCGCC TTTTTATCATCCTGA TERM 1509 1136029 - 1136055 + T 80 -11.6 -2.7243 | opp_overlap 1136030 1136034, overlap 1136027 1136034 TCTGTCTCTTTAAAA AGAAACCTCCGT CTT GCGGAGGTTTCG CCTTTTTATCATCCT TERM 1510 1136054 - 1136030 - T 100 -14.4 -4.56597 | opp_overlap 1136029 1136027 1136034, overlap 1136034 CTGTCTCTTTAAAAA GAAACCTCCG TCTTG CGGAGGTTTC GCCTTTTTATCATCC TERM 1511 1136034 - 1136050 + T 84 -10.1 -3.82067 | opp_overlap 1136030 1136034, overlap 1136029 1136027 CTCTTTAAAAAGAAA CCTCCGT CTT GCGGAGG TTTCGCCTTTTTATC TERM 1512 1136050 - 1136034 - T 100 -9.4 -4.85782 | opp_overlap 1136034 1136029 1136027, overlap 1136030 CTCTTTAAAAAGAAA CCTCCG TCTTG CGGAGG TTTCGCCTTTTTATC fabA 1136597 - 1136079 - | beta-hydroxydecanoyl thioester dehydrase ycbZ 1138426 - 1136666 - | putative ATP-dependent protease ycbG 1138611 - 1139066 + | hypothetical protein TERM 1513 1139110 - 1139080 - T 100 -12.7 -4.27441 | opp_overlap 1139087, overlap 1139087 AGTAGCAGTAATAAA CAAAAAACCCCGC ATAAA GCGGGGTTTTTTC AGGACGGAACTTAAG TERM 1514 1139103 - 1139087 - T 100 -10.8 -5.80003 | opp_overlap 1139087, overlap 1139080 GTAATAAACAAAAAA CCCCGC ATAAA GCGGGG TTTTTTCAGGACGGA TERM 1515 1139087 - 1139103 + T 100 -10.8 -5.00616 | opp_overlap 1139087 1139080 GTAATAAACAAAAAA CCCCGC ATAAA GCGGGG TTTTTTCAGGACGGA ompA 1140248 - 1139121 - | outer membrane protein A (3a;II*;G;d) TERM 1516 1139726 - 1139757 + g 90 -8 -4.87786 | gap 1, opp_overlap 1139735, overlap 1139729 CCCATTCAACACCAC CTGCGAATACCGGAG AAA CGCCGGTA-TCGTGG TTTTTCTCAGATTCA sulA 1141042 - 1140533 - | SOS cell division inhibitor TERM 1517 1141121 - 1141131 + H 75 -2.4 -5.28778 | ACCTTATTTTCGGAA AGCG CCT CGCA TTTTTTATCAATAGT EFER_1096 1141259 - 1141888 + | hypothetical protein yccS 1144064 - 1141851 - | conserved hypothetical protein; putative inner membrane protein TERM 1518 1142590 - 1142580 - GT 88 -2.4 -5.46698 | GCGAAAAGCAAAAAA CAGG ACG CCAG TGATCACCAGTAATA TERM 1519 1142873 - 1142857 - GT 78 -7.3 -4.57073 | GATTCTGGTGAAAAA TTACGAC GCA GCCGTAA CCAGATATCACTCAG yccF 1144470 - 1144024 - | conserved hypothetical protein; putative inner membrane protein helD 1144593 - 1146647 + | DNA helicase IV TERM 1520 1146649 - 1146676 + T 100 -9.8 -4.87133 | opp_overlap 1146652, overlap 1146651 1146667 CCAGAAAACCATGAA TAAGCAGGCGGT GGTG ACCGCCTGCACA TTTTATTTCAGGCGT TERM 1521 1146651 - 1146674 + T 88 -12.4 -2.70452 | opp_overlap 1146652, overlap 1146649 1146667 AGAAAACCATGAATA AGCAGGCGGT GGTG ACCGCCTGCA CATTTTATTTCAGGC TERM 1522 1146673 - 1146652 - T 100 -15.9 -3.81516 | opp_overlap 1146651 1146649 1146667 GAAAACCATGAATAA GCAGGCGGT GGTG ACCGCCTGC ACATTTTATTTCAGG mgsA 1147137 - 1146679 - | methylglyoxal synthase TERM 1523 1147223 - 1147210 - R 91 -3.8 -5.90231 | AGAAAGACAAAAAAA GCCT GGGCGA AGGC ACAAAATTTTCAGGA yccT 1147895 - 1147233 - | hypothetical protein TERM 1524 1147652 - 1147642 - G 75 -6.8 -4.30844 | AGCTGAGTATTAAAA CTGG CGA CCAG AGGTGGTGAGATGTA yccU 1148068 - 1148481 + | putative CoA-binding protein TERM 1525 1148518 - 1148485 - T 100 -18.3 -5.27335 | opp_overlap 1148488 1148514 CTGGCGAAATAAAAA GAAGCCCGGAAGG TGATTTTT CCTTCCGGGCTTC TCAAAGGGGCTAGTT TERM 1526 1148488 - 1148515 + T 100 -14.2 -3.28924 | opp_overlap 1148485, overlap 1148514 GCGAAATAAAAAGAA GCCCGGAAGG TGATTTTT CCTTCCGGGC TTCTCAAAGGGGCTA yccV 1148845 - 1148528 - | DNA-binding protein, hemimethylated yccW 1150006 - 1148903 - | putative AdoMet-dependent methyltransferase, UPF0064 family yccX 1149975 - 1150466 + | acylphosphatase tusE 1150792 - 1150463 - | subunit of enzyme for 2-thio modification of mnm5s2U of tRNA anticodon U TERM 1527 1150527 - 1150558 + g 91 -8 -5.06414 | TTCGCCGGACCTTTC GGGAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCACCAAA TERM 1528 1150863 - 1150837 - R 100 -10.1 -5.46657 | CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTATG AAAGTGTTAGCGGAT yccA 1151542 - 1150883 - | conserved hypothetical protein; putative inner membrane protein TERM 1529 1151324 - 1151337 + g 70 -5.2 -4.42386 | GGAGATAATCCCGCT CGGC TTATTC GCCG TTTTATAGGTCAGGA TERM 1530 1151952 - 1151984 + H 100 -11.4 -5.73563 | opp_overlap 1151954 1151957, overlap 1151957 GCTTCCGCCAGATAA AAGAAGGGGTTAGC TAAAT GCTAACCCCTTTTC TTTTTTTGATTTAGT TERM 1531 1151982 - 1151954 - H 100 -11.8 -4.52589 | opp_overlap 1151952 1151957, overlap 1151957 TTCCGCCAGATAAAA GAAGGGGTTAGC TAAAT GCTAACCCCTTT TCTTTTTTTGATTTA TERM 1532 1151979 - 1151957 - H 100 -13.5 -4.38141 | opp_overlap 1151952 1151957, overlap 1151954 CGCCAGATAAAAGAA GGGGTTAGC TAAAT GCTAACCCC TTTTCTTTTTTTGAT TERM 1533 1151957 - 1151979 + H 100 -13.5 -5.57888 | opp_overlap 1151957 1151954, overlap 1151952 CGCCAGATAAAAGAA GGGGTTAGC TAAAT GCTAACCCC TTTTCTTTTTTTGAT EFER_1108 1152124 - 1152885 + | hypothetical protein EFER_1109 1153176 - 1153042 - | hypothetical protein TERM 1534 1154165 - 1154177 + G 71 -9.1 -3.54459 | overlap 1154171 1154173 GTACTCATTCCACCG CCGAC ACC GTCGG TTTAACCGCGCTTGG hyaA 1153195 - 1154313 + | hydrogenase 1, small subunit TERM 1535 1155013 - 1154990 - g 70 -4.6 -4.56597 | gap 1, opp_overlap 1154996 CTTTGGTGGTAAAAA CCCAC-ATCCA AAC TGGATTGTTGG CGGGATGCCGTGCGC TERM 1536 1155521 - 1155507 - g 88 -11.4 -3.72893 | TACTCGTGGATCAAA GCGCCA CGC TGGCGC GGTAACGCGATGGAA TERM 1537 1155759 - 1155746 - g 72 -4.5 -4.67904 | overlap 1155747 GACCAACCTGAAAAA CGGCA ATCT TGCCA CCGCCTCCACGGAAA hyaB 1154310 - 1156103 + | hydrogenase 1, large subunit hyaC 1156122 - 1156829 + | hydrogenase 1, b-type cytochrome subunit hyaD 1156826 - 1157413 + | protein involved in processing of HyaA and HyaB proteins hyaE 1157410 - 1157808 + | protein involved in processing of HyaA and HyaB proteins TERM 1538 1158383 - 1158405 + GF 84 -6.2 -4.9792 | opp_overlap 1158384, overlap 1158384 TAATCTGACGCAATT ACCCATCAGC GAG GCTGATCGGC TTTTTCTCTCACGTC TERM 1539 1158384 - 1158404 + GF 80 -9.7 -3.58029 | opp_overlap 1158384, overlap 1158383 AATCTGACGCAATTA CCCATCAGC GAG GCTGATCGG CTTTTTCTCTCACGT TERM 1540 1158404 - 1158384 - gf 72 -9.7 -2.7556 | opp_overlap 1158384 1158383 AATCTGACGCAATTA CCCATCAGC GAG GCTGATCGG CTTTTTCTCTCACGT hyaF 1157745 - 1158659 + | protein involved in nickel incorporation into hydrogenase-1 proteins yecA 1158753 - 1159418 + | conserved hypothetical protein; putative metal-binding protein TERM 1541 1159424 - 1159454 + T 100 -9.7 -4.83615 | opp_overlap 1159427, overlap 1159427 CTTGCATTAATCATT AAAGGCCCGAAAG CACGA CTCTCGGGCCTTG TTTTTATCCCACCTC TERM 1542 1159427 - 1159451 + T 100 -11.4 -4.52873 | opp_overlap 1159427, overlap 1159424 GCATTAATCATTAAA GGCCCGAAAG CACGA CTCTCGGGCC TTGTTTTTATCCCAC TERM 1543 1159451 - 1159427 - T 100 -14.3 -3.85704 | opp_overlap 1159424 1159427 GCATTAATCATTAAA GGCCCGAAAGC ACG ACTCTCGGGCC TTGTTTTTATCCCAC tyrP 1160696 - 1159458 - | tyrosine transporter yecH 1160828 - 1161103 + | hypothetical protein TERM 1544 1161100 - 1161144 + T 100 -13.1 -4.11216 | opp_overlap 1161109, overlap 1161108 TAAGATTTGCCGCCA TTAATTAAATTACGGTGAGGA AGT TCCTCACCGTAAATGGGTTAA TTTTGCACATCAAGC TERM 1545 1161108 - 1161136 + T 100 -14.7 -2.66118 | opp_overlap 1161109, overlap 1161100 GCCGCCATTAATTAA ATTACGGTGAGGA AGT TCCTCACCGTAAA TGGGTTAATTTTGCA TERM 1546 1161135 - 1161109 - T 100 -18.2 -3.95584 | opp_overlap 1161108 1161100 CCGCCATTAATTAAA TTACGGTGAGGA AGT TCCTCACCGTAA ATGGGTTAATTTTGC ftn 1161638 - 1161141 - | ferritin iron storage protein (cytoplasmic) EFER_1120 1162103 - 1161768 - | hypothetical protein yecI 1162752 - 1162249 - | putative ferritin-like protein TERM 1547 1162914 - 1162926 + H 80 -2.7 -5.49809 | AGAAAATCCTTAAAT CATAG AGT TTATG TTTTTTTACACTTTG TERM 1548 1163276 - 1163318 + H 91 -13.1 -2.60555 | gap 1, opp_overlap 1163290, overlap 1163273 1163281 1163290 CCCTGCTGACTTGTC GTGTATCCT-AAAAACTTAC TTTT GTAAGTTTTTGAGGATTCAC TCACTTGTCGCGTTA TERM 1549 1163281 - 1163313 + H 77 -10.2 -3.10905 | gap 1, opp_overlap 1163290, overlap 1163276 1163273 1163290 CTGACTTGTCGTGTA TCCT-AAAAACTTAC TTTT GTAAGTTTTTGAGGA TTCACTCACTTGTCG TERM 1550 1163290 - 1163303 + H 73 -5.3 -4.62471 | opp_overlap 1163290, overlap 1163281 1163276 1163273 CGTGTATCCTAAAAA CTTAC TTTT GTAAG TTTTTGAGGATTCAC TERM 1551 1163303 - 1163290 - H 73 -5.3 -4.62069 | opp_overlap 1163281 1163276 1163273 1163290 CGTGTATCCTAAAAA CTTAC TTTT GTAAG TTTTTGAGGATTCAC araF 1163710 - 1164699 + | L-arabinose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1552 1164739 - 1164761 + F 100 -14.2 -3.767 | opp_overlap 1164734 1164731 TCAGTAATATCCCGA TCCTCTGCCG TCA TGGCAGAGGA TTTGATAAATGACTC TERM 1553 1165117 - 1165099 - g 70 -5.2 -4.39426 | overlap 1165102 GACAGTGGCAGAAAA CATCTACC TGG GGCAGCTG CCGCAAAAAGGGGGA araG 1164794 - 1166308 + | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components araH 1166323 - 1167309 + | fused L-arabinose transporter subunits of ABC superfamily: membrane components TERM 1554 1167361 - 1167340 - f 100 -11.5 -4.16251 | opp_overlap 1167340 AGATAACTCTGAAAA GCCAGTCGC AGTC GCGGCTGGC TTCATCTTATGCCAA TERM 1555 1167340 - 1167361 + F 100 -13.7 -3.41745 | opp_overlap 1167340 AGATAACTCTGAAAA GCCAGTCGC AGTC GCGGCTGGC TTCATCTTATGCCAA otsB 1167463 - 1168266 + | trehalose-6-phosphate phosphatase, biosynthetic otsA 1168241 - 1169665 + | trehalose-6-phosphate synthase yecG 1170100 - 1169672 - | universal stress protein TERM 1556 1169758 - 1169725 - G 77 -9.7 -3.67597 | gap 1, opp_overlap 1169724 1169719, overlap 1169727 CGCTGGAGCCAATAA CACTTTTCGCTGAGCA GGA TGCTC-GCGAAAAGAA GCTGTGGTTATGATT TERM 1557 1169756 - 1169727 - G 100 -14.5 -3.41988 | gap 1, opp_overlap 1169724 1169719, overlap 1169725 CTGGAGCCAATAACA CTTTTCGCTGAGCA GGA TGCTC-GCGAAAAG AAGCTGTGGTTATGA TERM 1558 1170460 - 1170444 - H 70 -9.5 -2.78992 | opp_overlap 1170434 1170446, overlap 1170443 1170446 AGTTACGTGAATAAT TATCACG TTG CGTGATA TTCACATTACGGTAA TERM 1559 1170557 - 1170576 + H 75 -3 -5.12916 | ACAGAAAAGTATTGC TAATTGAT AAAC ATTAATTA TTTTGTTGTTTTATG TERM 1560 1170588 - 1170607 + H 76 -8 -4.21194 | ATTATTTTGTTGTTT TATGTGAT CTGG ATCACATA TTTTCGATAATCGCA TERM 1561 1170894 - 1170840 - g 81 -9.5 -4.04397 | opp_overlap 1170838, overlap 1170838 ATCCGCATAAAAATA TATACCTGGCATAATTCGAGTCG TAGCACAGG CAACTTGAAGTATGCCGGGTATA GCTGGTTATTCTGGA flhD 1170810 - 1171268 + | DNA-binding transcriptional dual regulator with FlhC (modular protein) TERM 1562 1171443 - 1171433 - g 70 -6.8 -4.11394 | opp_overlap 1171432 1171433 AGCCCACCGCCAAAA GGCA TGT TGCC GTTCTCTACTGACTG flhC 1171271 - 1171849 + | DNA-binding transcriptional dual regulator with FlhD TERM 1563 1171876 - 1171899 + F 100 -9.6 -5.43866 | TGGTAAAGCCCCCCA GCAGCGGT CACTCTCC ACCGCTGC TTTTTTTGCCACTTC TERM 1564 1172219 - 1172254 + G 75 -5.3 -4.66537 | overlap 1172221 1172222 CTGCTGGCGCTGCTT TACCGCCTGATGGCG AAATCA CGCCAGCAGGGGATG TTTTCTCTTGAACGG motA 1171973 - 1172860 + | proton conductor component of flagella motor TERM 1565 1172923 - 1172910 - gf 77 -5.9 -4.66833 | GCGTAAGCCCAAAAA CCACG GCGG CGCGG GGCATGGTTCGTGGA motB 1172857 - 1173771 + | protein that enables flagellar motor rotation TERM 1566 1174542 - 1174529 - gf 83 -5.9 -5.01535 | GCAGAACGAGAAAAA CCGGC CCGC GCCAG TGAATCCACCAGCAT cheA 1173716 - 1175731 + | fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase ; signal sensing protein cheW 1175748 - 1176242 + | purine-binding chemotaxis protein EFER_1135 1176461 - 1177081 + | putative Type I pilus protein CsuA/B TERM 1567 1177131 - 1177103 - g 95 -6 -5.39221 | gap 2, opp_overlap 1177104 1177105 1177108, overlap 1177104 1177107 ATAATAATGAAAAAA CCGACATGCCCCCT GTC AGGGGGCG-GT-GG CTTGTTTCGCCTGAG TERM 1568 1177105 - 1177132 + G 74 -8.4 -3.94188 | gap 1, opp_overlap 1177103 1177104 1177107, overlap 1177104 1177108 AATAATGAAAAAACC GACA-TGCCCCCT GTC AGGGGGCGGTGGC TTGTTTCGCCTGAGT EFER_1136 1177094 - 1177633 + | hypothetical protein EFER_1137 1177646 - 1178392 + | hypothetical protein TERM 1569 1178562 - 1178576 + GT 79 -4.2 -5.03994 | GGTGGTGCCAGTGAC TCAGCG AAA CGGTGA TTTTTATCTCTCCAG TERM 1570 1178690 - 1178704 + GT 76 -7.8 -4.14392 | opp_overlap 1178687 1178690 CAGAGTACGACAGCA GCGGTC AGC GACTGC TTTTAACCGTTCCGC TERM 1571 1180013 - 1179998 - gT 81 -4.6 -5.1101 | TCACCATGGAAAAAA TGCCGG ATGG CGGGCA AACACAACGTATTAA EFER_1139 1180954 - 1180652 - | hypothetical protein EFER_1138 1178368 - 1180755 + | hypothetical protein EFER_1140 1180737 - 1181711 + | hypothetical protein tar 1181771 - 1183336 + | methyl-accepting chemotaxis protein II TERM 1572 1183373 - 1183388 + G 81 -6.1 -4.83615 | GACCTCATCGCTACC CGACG GACAAA CGTCG TTTTTATCACAGATG TERM 1573 1184071 - 1184095 + G 90 -10 -4.3898 | opp_overlap 1184071 TTTATTTTGACAAAA CGACGCAGCA AGAGA TTCTGCGTCG TTTTGTGCCACTCCT TERM 1574 1184095 - 1184071 - g 90 -10 -4.38712 | opp_overlap 1184071 TTTATTTTGACAAAA CGACGCAGCA AGAGA TTCTGCGTCG TTTTGTGCCACTCCT cheR 1183356 - 1184222 + | chemotaxis regulator, protein-glutamate methyltransferase TERM 1575 1184979 - 1184958 - g 70 -3.7 -4.59376 | gap 1, overlap 1184962 ATTATCAAATCAAAA TTCA-CGCTG GCC CGGCGGTGAA CCGCCATCGACCTTC cheB 1184219 - 1185268 + | fused chemotaxis regulator ; protein-glutamate methylesterase in two-component regulatory system with CheA cheY 1185283 - 1185672 + | chemotaxis regulator transmitting signal to flagellar motor component TERM 1576 1185726 - 1185701 - g 72 -8.3 -3.737 | overlap 1185702 CAACCTTCGATTAAA CCTGCTGATGA ACAT TCAGCAGCAGA CATAATTGCGCGCAT cheZ 1185680 - 1186324 + | chemotaxis regulator, protein phosphatase for CheY TERM 1577 1186355 - 1186332 - T 84 -11 -3.59979 | opp_overlap 1186321 GGTTCTGAGCGCAAA CGCCGGATGA CAGA TTATCCGGCG TTACAATCAGTCTCT cbpM 1186690 - 1186370 - | modulator of CbpA co-chaperone TERM 1578 1186397 - 1186415 + g 70 -5.9 -4.26903 | opp_overlap 1186396 1186397 AATAAAACGCGAAAG CCGGTGG CGCAA CTGCCGG TTTTCCTGACGTAAA cbpA 1187595 - 1186675 - | curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK EFER_1148 1188169 - 1187798 - | hypothetical protein dadA 1189404 - 1188151 - | putative D-amino acid dehydrogenase EFER_1150 1190369 - 1189455 - | putative LysR family transcriptional regulator EFER_1151 1190609 - 1192075 + | hypothetical protein TERM 1579 1192121 - 1192085 - Tf 100 -12.4 -4.1347 | gap 1, opp_overlap 1192085 1192096 1192108 1192117, overlap 1192086 GTTTAACGATACAAA CCAGGCGATAGCGCGAC TACT GTC-CGTTATCGCCTGA CGGTTTCCCGTCTCG TERM 1580 1192120 - 1192086 - Tf 100 -13.7 -3.076 | gap 1, opp_overlap 1192085 1192096 1192108 1192117, overlap 1192085 TTTAACGATACAAAC CAGGCGATAGCGCGAC TACT GTC-CGTTATCGCCTG ACGGTTTCCCGTCTC EFER_1152 1192396 - 1192067 - | hypothetical protein TERM 1581 1192665 - 1192649 - gR 87 -4.3 -5.19212 | ACCACCAGGAAAAAA TGGGCAC CAT GGACCCA ACCTTTAACCCGGTG agp 1192225 - 1193466 + | glucose-1-phosphatase/inositol phosphatase TERM 1582 1193488 - 1193474 - TR 71 -4.2 -4.84673 | overlap 1193475 TGAAATAACAGAAAA CTCCCC CGT GAGGAA TGAACTGCACCTTAA yccJ 1193787 - 1193560 - | hypothetical protein wrbA 1194404 - 1193808 - | putative conserved flavoprotein TERM 1583 1194724 - 1194709 - H 76 -7.6 -4.19817 | CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTCAATCC EFER_1157 1194797 - 1194949 + | hypothetical protein TERM 1584 1194996 - 1195014 + F 100 -13.1 -5.66338 | opp_overlap 1194989 1194993 GTCATTAAGCCACCA CCGCCGG TAGCC CCGGCGG TTTTTTATTGTCTTT TERM 1585 1195096 - 1195066 - f 100 -14.2 -3.85698 | TTGCCCGTTCATAAA TTCTGCATTCAGCT GCA ATCTGAATGCAGAA GGTCGAGGCCGGACA TERM 1586 1195103 - 1195115 + F 72 -6.2 -4.38774 | AATGCAGAAGGTCGA GGCC GGACA GGCC TTTTGCTATCCTGTT TERM 1587 1195233 - 1195220 - g 82 -2.3 -5.45652 | AGTGCGAAGAAAAAA GCGAT CTTA AGCGC AGCACTGGATACTTT TERM 1588 1195666 - 1195680 + G 77 -8.6 -4.11394 | GATATGGGCATCCAC TCAGCA TTA TGCTGA TTTTGCCCCTCAAGT rutR 1195157 - 1195795 + | DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway TERM 1589 1195819 - 1195834 + F 100 -6.8 -5.74122 | opp_overlap 1195819, overlap 1195811 CATAAATTACAGAAA GCAGGC ATAT GTCTGC TTTTTTTATATCCTC TERM 1590 1197010 - 1196993 - gf 100 -2.7 -5.61596 | overlap 1197003 ACTTTCACAAAAAAA TTGCAGA AAGT TCTTCAA AGAATCACCAGGAAT yliE 1196881 - 1199229 + | hypothetical protein TERM 1591 1199356 - 1199341 - gf 75 -4.6 -4.77698 | opp_overlap 1199342, overlap 1199342 TAAGAGTAAAATAAA CGCCGT AAAA ACGGCT ATTGTGGATAATGGT TERM 1592 1199948 - 1199969 + GF 73 -7.3 -4.11281 | ATTTTGATTGCAATC TCAGCCGTG ATTA CATGGTTGA TTTATCATTATCATG yliF 1199063 - 1200574 + | putative enzyme with GGDEF domain TERM 1593 1200893 - 1200913 + G 71 -3.4 -4.84492 | gap 1, opp_overlap 1200895, overlap 1200895 TTTCAACCACCTTAA TAT-GGGAT AAAT ATCCCGATA TTTTCTTCTCGTTAA TERM 1594 1201848 - 1201867 + G 93 -2 -5.64274 | overlap 1201850 ACGACTAATTTTTCT TTGTGCAC CACT GTGCCCCA TTTTTTTCTCCGTAG TERM 1595 1202383 - 1202393 + G 71 -3.2 -4.82901 | ACACGACACACTTGT TCGG TAA TCGA TTTTTCTGAGGGAGG bcsA 1200643 - 1202748 + | cellulose synthase catalytic subunit [UDP-forming] bcsB 1202813 - 1204960 + | regulator of cellulose synthase, cyclic di-GMP binding TERM 1596 1204992 - 1204966 - T 100 -11.7 -4.73613 | gap 1, opp_overlap 1204963 1204962 1204967, overlap 1204968 GCAGGAGTAATAAAA GAGTTACCCACC ATGC GGTGGGTAAC-C TGAATTCATTTTTGA TERM 1597 1204967 - 1204992 + T 83 -11.9 -2.68305 | opp_overlap 1204966 1204968, overlap 1204963 1204962 CAGGAGTAATAAAAG AGTTACCCACC ATGC GGTGGGTAACC TGAATTCATTTTTGA TERM 1598 1204991 - 1204968 - T 100 -15.4 -3.98016 | opp_overlap 1204967 1204963 1204962, overlap 1204966 AGGAGTAATAAAAGA GTTACCCACC ATGC GGTGGGTAAC CTGAATTCATTTTTG yedF 1205231 - 1204998 - | hypothetical protein yedE 1206433 - 1205228 - | conserved hypothetical protein; putative inner membrane protein yedD 1206620 - 1207033 + | hypothetical protein TERM 1599 1207039 - 1207062 + T 100 -9.6 -4.66609 | gap 1, overlap 1207040 1207041 ACTGCCGTAACCTCA TA-CCCCGGCG TGC TGCCGGGGATA TTTTTAAATCACCTC TERM 1600 1207040 - 1207060 + T 89 -10.3 -3.94812 | overlap 1207039 1207041 CTGCCGTAACCTCAT ACCCCGGCG TGC TGCCGGGGA TATTTTTAAATCACC TERM 1601 1207041 - 1207059 + T 100 -13.8 -2.96405 | overlap 1207040 1207039 TGCCGTAACCTCATA CCCCGGCG TGC TGCCGGGG ATATTTTTAAATCAC amyA 1208553 - 1207066 - | cytoplasmic alpha-amylase TERM 1602 1208553 - 1208598 + g 100 -22.2 -4.07568 | opp_overlap 1208570 GTGTGGGGTTTTTCA TCTTCCGTGCTCCAGAAGTC ATTAGC GACTTCTGGAGTATGGAAGA TTTTAAGACGAGGCG fliT 1208990 - 1208619 - | putative chaperone for FliD fliS 1209397 - 1208987 - | flagellar protein potentiates polymerization fliD 1210822 - 1209416 - | flagellar filament capping protein TERM 1603 1209714 - 1209724 + g 79 -2.4 -5.24449 | ACATCAACCGAATGT TCGC TAA GCGC TTTTTTCAGTTTATC TERM 1604 1210037 - 1210051 + g 72 -5.6 -4.44974 | overlap 1210023 1210039 ATTGACGGTGATCGT GACGTC ATC GACGAC TTTTGTCAGGTTTAG TERM 1605 1210363 - 1210374 + g 70 -5.8 -4.21974 | TGGCATCACGCAGCC CCTC CAGA GAGG TTTGTTCACTGGTGA TERM 1606 1211478 - 1211464 - g 74 -10 -3.55622 | TTTAACGGCGTTAAA GTCCTG TCT CAGGAC AATCAAATGAAAATT TERM 1607 1211975 - 1211965 - g 75 -5.4 -4.62872 | opp_overlap 1211965 ATCAATGGTGAAAAA GTCA CGC TGAC TATTAAGGGGGCTGC TERM 1608 1212161 - 1212140 - g 82 -11.7 -3.49878 | overlap 1212133 CAACCAAAGGTACAA GCACCATTA CTGT TAATGGTGC TAACTACACTGCAAA fliC 1211032 - 1212564 + | Flagellin (Phase-1-C flagellin) TERM 1609 1212601 - 1212586 - f 91 -11.8 -3.55071 | opp_overlap 1212586 CTATATTCTTCCAAA CCCCGC TCCG GCGGGG TTTTTTCTAGCAGGC TERM 1610 1212586 - 1212601 + F 100 -11.8 -5.24129 | opp_overlap 1212586 CTATATTCTTCCAAA CCCCGC TCCG GCGGGG TTTTTTCTAGCAGGC fliA 1212730 - 1213446 + | RNA polymerase, sigma 28 (sigma F) factor fliZ 1213505 - 1214044 + | putative regulator of FliA activity fliY 1214132 - 1214932 + | cystine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1611 1214977 - 1214946 - f 71 -9.6 -2.93357 | opp_overlap 1214946 1214953, overlap 1214936 1214953 AATCATTGTAAACGA CAAAAAAGGCGC TTTAACCG GCGCCTTTTTTA TTTAATTCTCAACCG TERM 1612 1214946 - 1214977 + F 74 -8.1 -3.9941 | opp_overlap 1214936 1214946 1214953, overlap 1214953 AATCATTGTAAACGA CAAAAAAGGCGCT TTAACC GGCGCCTTTTTTA TTTAATTCTCAACCG TERM 1613 1214970 - 1214953 - f 87 -5.5 -5.42265 | opp_overlap 1214946 1214953, overlap 1214946 GTAAACGACAAAAAA GGCGC TTTAACCG GCGCC TTTTTTATTTAATTC TERM 1614 1214953 - 1214970 + F 100 -6.2 -5.72053 | opp_overlap 1214953 1214946, overlap 1214946 GTAAACGACAAAAAA GGCGCT TTAACC GGCGCC TTTTTTATTTAATTC yedO 1215039 - 1216025 + | D-cysteine desulfhydrase, PLP-dependent yecS 1216041 - 1216709 + | putative transporter subunit: permease component of ABC superfamily transporter TERM 1615 1216945 - 1216968 + G 100 -7.4 -5.26119 | gap 1 ACAAAAAGGGCTAAT CCGCCA-GCTG CGT CAGCATGTCGG TTTTGTTTTTCAAAA yecC 1216706 - 1217458 + | putative transporter subunit: ATP-binding component of ABC superfamily transporter TERM 1616 1217471 - 1217499 + F 76 -9.6 -3.41798 | opp_overlap 1217471 1217469, overlap 1217469 1217467 1217463 TAAAGCGGATAAAGA TTCCCCAGGCTG CGTGT TGGTCTGGGGAA TATATTCTTTTCGAA sdiA 1217653 - 1218408 + | DNA-binding transcriptional activator TERM 1617 1218468 - 1218442 - T 100 -16.7 -4.92239 | opp_overlap 1218442 1218454, overlap 1218453 TGAAAAAGGCAAAAA CCGGCTGAAAG TCAGG CTTTCAGCCGG TTTTTGTTTACTGGC TERM 1618 1218442 - 1218468 + T 100 -17.4 -5.33405 | opp_overlap 1218442 1218453, overlap 1218454 TGAAAAAGGCAAAAA CCGGCTGAAAGT CAG GCTTTCAGCCGG TTTTTGTTTACTGGC TERM 1619 1218454 - 1218493 + T 88 -10 -4.14598 | opp_overlap 1218442 1218453, overlap 1218442 AAACCGGCTGAAAGT CAGGCTTTCAGCCGGT TTTTGTTT ACTGGCGGTAAGCCTG TTTAATTTGCTTAAC yecF 1218700 - 1218476 - | hypothetical protein TERM 1620 1218548 - 1218559 + g 81 -5.8 -4.87318 | AGTTTCATCTGCGAT CAGC GCCA GCTG TTTTTCCATTTTCAA uvrY 1219146 - 1219802 + | DNA-binding response regulator in two-component regulatory system with BarA TERM 1621 1221303 - 1221265 - g 73 -3.8 -4.82901 | gap 1, overlap 1221267 TCCCTGGGATAAAAA CCGTCCGCTGCTTTTGG GCGTTG CCAAAGGC-GCTGACCG TAAAGCCGGGCTGGA uvrC 1219799 - 1221631 + | excinuclease UvrABC, endonuclease subunit pgsA 1221688 - 1222236 + | phosphatidylglycerophosphate synthetase TERM 1622 1222430 - 1222414 - T 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 1623 1222649 - 1222629 - T 75 -10.5 -2.89742 | overlap 1222632 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGGCAACGCTGTGC TERM 1624 1222646 - 1222632 - T 73 -8.6 -3.5947 | overlap 1222629 AATCGGTAGACACAA GGGATT TAA AATCCC TCGGCGGCAACGCTG TERM 1625 1222737 - 1222750 + T 100 -8.1 -6.23317 | opp_overlap 1222737 AGCAGTGTCGTGAAA CCACC TTCG GGTGG TTTTTTTGTTTTTGT TERM 1626 1222814 - 1222797 - T 100 -9.1 -5.58209 | GTAAATGCAAAAAAA GAGGGCA TCGT CGCCCTC TACAGATACTCCCCG kch 1224100 - 1222838 - | voltage-gated potassium channel TERM 1627 1223146 - 1223167 + g 81 -4.3 -5.03314 | overlap 1223147 TGAGCGCCAGAATCG CCCGGCAGT CGTC AATGCCGGC TTTTTTCAAAATCGC TERM 1628 1225933 - 1225921 - g 70 -10.5 -2.72745 | overlap 1225920 1225918 CTGATGCAGAAATAT GCCCG GCT CGGGC CAGGAGCAATGCACA appC 1224433 - 1225977 + | cytochrome bd-II oxidase, subunit I TERM 1629 1226740 - 1226759 + G 71 -2 -5.01732 | overlap 1226741 TTGTCGTGATCGCGC CTGGCGCA TGGA TGCGCAAC TTTTTTAACACCATT appB 1225989 - 1227125 + | cytochrome bd-II oxidase, subunit II TERM 1630 1227364 - 1227385 + T 100 -10.1 -5.10968 | TTGTCAACAATCTGA CCCCAGCCA TTAA TCGCTGGGG TTTTTGTGTATTAGT EFER_1187 1227776 - 1227396 - | putative lipoprotein torS 1230638 - 1227894 - | hybrid sensory histidine kinase in two-component regulatory system with TorR TERM 1631 1231603 - 1231630 + G 70 -5.6 -4.30576 | gap 1 CAATTACAGGGGCAA TCGGT-GTCTGAT AAT GTCAGCCCACCGA TTTTAGTCCTGACGC torT 1230715 - 1231743 + | periplasmic sensory protein associated with the TorRS two-component regulatory system torR 1232408 - 1231716 - | DNA-binding response regulator in two-component regulatory system with TorS torC 1232538 - 1233710 + | trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit torA 1233710 - 1236256 + | trimethylamine N-oxide (TMAO) reductase I, catalytic subunit TERM 1632 1236417 - 1236389 - gf 82 -8 -4.56597 | overlap 1236394 TTTCGTTGCTAAAAA GCGAACCGCCGC TCACT GCGGCGGTGAAC GAGCTGGAAACTAAA TERM 1633 1236412 - 1236394 - gf 100 -13.1 -3.45031 | overlap 1236389 TTGCTAAAAAGCGAA CCGCCGC TCACT GCGGCGG TGAACGAGCTGGAAA TERM 1634 1236474 - 1236493 + GF 70 -7.8 -3.57406 | overlap 1236472 CGCTCGTCTGGAACT GGCCGC TGACTTTT GCGGCC TGTTTCTGATGACCG torD 1236220 - 1236849 + | chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I TERM 1635 1236858 - 1236886 + F 95 -8.1 -5.07567 | overlap 1236860 GCACTGATGGCATCC CGGCCGGAGAG ATTTATA CTCTCCGGCTA TTTTTTAAGATGTAA TERM 1636 1236860 - 1236884 + F 100 -12.9 -4.16351 | overlap 1236858 ACTGATGGCATCCCG GCCGGAGAG ATTTATA CTCTCCGGC TATTTTTTAAGATGT TERM 1637 1237601 - 1237611 + G 75 -6.8 -4.33739 | overlap 1237607 GTGCTGGGTGTCATT CCGA TGG TCGG TTTTGACGTTTTTTA TERM 1638 1237749 - 1237735 - g 73 -11.4 -2.73124 | overlap 1237734 1237738 CCGTATCCGTCAAAT GCAGCG GGC CGCTGC CCGACGACGAATGAT TERM 1639 1238095 - 1238115 + G 81 -8.9 -4.36914 | opp_overlap 1238092, overlap 1238096 AAAACCTGCAAACCT CCCGGTGCC AGA GGCACTGGA TTTTATCAACGAGAA TERM 1640 1238096 - 1238114 + G 81 -12.4 -3.21934 | opp_overlap 1238092, overlap 1238095 AAACCTGCAAACCTC CCGGTGCC AGA GGCACTGG ATTTTATCAACGAGA flhB 1236998 - 1238146 + | flagellar export pore protein flhA 1238139 - 1240217 + | putative flagellar export pore protein TERM 1641 1240255 - 1240301 + G 77 -11.7 -3.19668 | overlap 1240262 GTTATTTCCACTGGT TGCCAAGGCTGCTGGCG AAGGAATGTGGCA GGCCAGCAGCTTTGGCA TTACGTTACATCATC flhE 1240217 - 1240612 + | hypothetical protein TERM 1642 1240753 - 1240807 + T 91 -13 -2.81118 | opp_overlap 1240749 1240753 1240758 1240770 1240805, overlap 1240770 1240799 1240802 TCCGGCATAAACAAA GTACACTTTGTCAAAAAGCCGATGTT GCT GACATCGGCTTTTTGACGCAGAACAC GTTTACATGCGTTCT TERM 1643 1240807 - 1240753 - T 100 -14.5 -4.55295 | opp_overlap 1240753 1240770 1240799 1240802, overlap 1240749 1240758 1240770 1240805 TCCGGCATAAACAAA GTACACTTTGTCAAAAAGCCGATGT TGCTG ACATCGGCTTTTTGACGCAGAACAC GTTTACATGCGTTCT TERM 1644 1240802 - 1240758 - T 100 -17.4 -3.16414 | opp_overlap 1240753 1240770 1240799, overlap 1240749 1240753 1240770 CATAAACAAAGTACA CTTTGTCAAAAAGCCGATGT TGCTG ACATCGGCTTTTTGACGCAG AACACGTTTACATGC TERM 1645 1240790 - 1240770 - T 100 -11.2 -4.57837 | opp_overlap 1240770 1240753, overlap 1240758 1240753 ACACTTTGTCAAAAA GCCGATGT TGCTG ACATCGGC TTTTTGACGCAGAAC TERM 1646 1240770 - 1240790 + T 100 -11.9 -4.56597 | opp_overlap 1240758 1240753 1240770, overlap 1240753 ACACTTTGTCAAAAA GCCGATGTT GCT GACATCGGC TTTTTGACGCAGAAC argS 1242543 - 1240810 - | arginyl-tRNA synthetase TERM 1647 1242483 - 1242462 - G 70 -10.1 -3.18264 | TTGCTGACTGACGAA CCTGCGGTT CGCA ATCCGCAGG CGCGCCTGCCGCAAT yecM 1242781 - 1243347 + | putative metal-binding enzyme cutC 1243353 - 1244105 + | copper homeostasis protein TERM 1648 1244153 - 1244177 + T 100 -10 -5.67063 | TGCTTGCTCGTACCA GGCCCCTG CAATTTCAA CAGGGGCC TTTTTTTATCATGGC yecP 1245157 - 1244186 - | hypothetical protein yecO 1245897 - 1245154 - | AdoMet-dependent methyltransferase yecN 1246333 - 1245938 - | conserved hypothetical protein; putative inner membrane protein TERM 1649 1246038 - 1246013 - G 73 -11.8 -2.6472 | overlap 1246003 1246001 CAACAGCGCACACCA GGTGGCGCTC ATGCCG GAGCGCCGCC AGCGAAACAGATGAT yecE 1247204 - 1246386 - | hypothetical protein TERM 1650 1246520 - 1246544 + g 72 -10 -3.31915 | opp_overlap 1246519 1246520, overlap 1246518 1246516 GTAAAAAAAGATAAG GCGTAGTGGT CTGAT GCCACTGCGC TAATTTTTGTAACCA yecD 1247767 - 1247201 - | putative hydrolase aspS 1248077 - 1249849 + | aspartyl-tRNA synthetase nudB 1249851 - 1250294 + | dATP pyrophosphohydrolase yebC 1250323 - 1251063 + | hypothetical protein TERM 1651 1251330 - 1251318 - g 72 -4.7 -4.59773 | overlap 1251319 CTTTATGGCTAAAAA TGCCG ACT CGGCC TTGAAGCTGGGGCAG TERM 1652 1251484 - 1251455 - g 74 -2.8 -5.02074 | gap 1, opp_overlap 1251459 GTAGTGCCGAAAAAA GCCAGGTGC-AGC ATATG GTTCGCACCTTGC TGAAACTCCCCGCTA ruvC 1251097 - 1251618 + | component of RuvABC resolvasome, endonuclease TERM 1653 1251626 - 1251651 + T 89 -10.4 -3.97947 | opp_overlap 1251623 TGCGTTAAGTTATAC CGCCTCGGTC AATTCA GGCTGAGGCG TTTCTACTCCCTCCG yebB 1252222 - 1251620 - | hypothetical protein TERM 1654 1252265 - 1252275 + H 70 -2.6 -5.00616 | opp_overlap 1252265 ATATACGTAATAGCA TAAA AAA TTTA TTTTTTCAGGAGGCG TERM 1655 1252428 - 1252447 + H 100 -6.4 -5.67063 | overlap 1252429 GTTTTCTTCATCCTT CGCTGGAT ATCT ATCCAGCA TTTTTTTATCATACA TERM 1656 1252429 - 1252446 + H 86 -9.9 -3.99153 | overlap 1252428 TTTTCTTCATCCTTC GCTGGAT ATCT ATCCAGC ATTTTTTTATCATAC TERM 1657 1252741 - 1252729 - g 76 -7.7 -4.28018 | overlap 1252718 AAGAGTTGATCAAAA CCAAC GGC GTTGG GCCTAAACTGGCATT ruvA 1252497 - 1253108 + | component of RuvABC resolvasome, regulatory subunit TERM 1658 1253462 - 1253491 + G 74 -10.1 -3.48593 | gap 1, opp_overlap 1253460 TTTATTGATGAGATC CACCGTCTTTCGCC AGT GGTGGAAGA-GGTG TTGTATCCGGCAATG ruvB 1253117 - 1254127 + | ATP-dependent DNA helicase, component of RuvABC resolvasome znuB 1255058 - 1254273 - | zinc transporter subunit: membrane component of ABC superfamily TERM 1659 1254904 - 1254891 - G 70 -5.3 -4.41206 | overlap 1254901 1254902 AATGACTGCATAAAA TGGAT TAAC ATCCA GCAACAGGCCGAAGG znuC 1255809 - 1255051 - | zinc transporter subunit: ATP-binding component of ABC superfamily TERM 1660 1255355 - 1255371 + g 70 -10.1 -3.14132 | ACCTGCCCGTTTACA TCCACGC CCT GCGTGGG TTCATCCAGCACCAG znuA 1255834 - 1256820 + | zinc transporter subunit: periplasmic-binding component of ABC superfamily TERM 1661 1257457 - 1257441 - g 72 -4.3 -4.60487 | overlap 1257442 TACCAGCGCGAAAAA TGCCGGT CTC ACCAGCG CCGAAGTTAGCGCCG yebA 1256836 - 1258158 + | putative metallopeptidase TERM 1662 1258175 - 1258197 + F 100 -9.1 -6.09196 | opp_overlap 1258175 AGAATTGCAGACAAA GCCGGTACG CAATA TGTGCCGGC TTTTTTTATTTTGAA TERM 1663 1258477 - 1258460 - g 81 -6.9 -4.59773 | opp_overlap 1258439 1258458 GGCGACTGGGAAAAA GTTCCCG CCGC CGGGCAC TGATTAATTTATCGT TERM 1664 1258626 - 1258610 - g 80 -5.2 -5.00616 | GCGGCCCGGAAAAAA TTCTAC CGCGT GTAGAA TGGCAAGGTCGTGAA lpxM 1258279 - 1259250 + | myristoyl-acyl carrier protein (ACP)-dependent acyltransferase TERM 1665 1259273 - 1259255 - T 100 -8.1 -5.68438 | CCATCAAATAAAAAA GCCTCCC GGTAT GAGAGGC TGAGACTGATGACAA pykA 1260844 - 1259402 - | pyruvate kinase II yebK 1261835 - 1260966 - | putative DNA-binding transcriptional regulator TERM 1666 1261455 - 1261440 - G 81 -4.7 -5.05782 | ACCGAGGCCAAAAAA GGCAA TTTTCT TTGCC TGAGTGAGAAGATCA zwf 1262165 - 1263640 + | glucose-6-phosphate dehydrogenase TERM 1667 1263720 - 1263745 + F 100 -9 -5.80364 | gap 1 TTTTTACACTTTTAA GCCTCACGTGG ATTCA CC-CGTGGGGC TTTTTTTATTACACT edd 1263863 - 1265674 + | 6-phosphogluconate dehydratase TERM 1668 1265756 - 1265768 + G 78 -9.1 -3.90241 | opp_overlap 1265742 ATCCTGACCACTGGC CCGGT AGT ACCGG TTATTGTGGTTAATA eda 1265711 - 1266352 + | multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase TERM 1669 1266389 - 1266359 - Tf 71 -3.3 -5.08088 | gap 1, overlap 1266361 AAGTTGTAAGAAAAA GATTGCTGAAGTCC GGAT GGACCCC-GCAATA CATTGAATTTGTATG TERM 1670 1266442 - 1266397 - Tf 74 -10 -3.19175 | gap 2, overlap 1266413 CCGCAATACATTGAA TTTGT--ATGCCGGATAAGACG CTTA CGCCCCATCCGGCATGTACAAA GCACAAAATATCAGC TERM 1671 1266502 - 1266451 - Tf 91 -8.4 -4.64846 | gap 1, opp_overlap 1266466, overlap 1266453 1266456 1266460 1266466 GTACAAAGCACAAAA TA-TCAGCAATAAAAATGCCCGA TCATAAG TCGGGCATTTTTATTGGTCAGTA CTAACAGTCGGTATT TERM 1672 1266499 - 1266453 - Tf 100 -12.6 -3.92414 | opp_overlap 1266466, overlap 1266451 1266456 1266460 1266466 ACAAAGCACAAAATA TCAGCAATAAAAATGCCCGA TCATAAG TCGGGCATTTTTATTGGTCA GTACTAACAGTCGGT TERM 1673 1266496 - 1266456 - Tf 100 -14.3 -3.00061 | opp_overlap 1266466, overlap 1266453 1266451 1266460 1266466 AAGCACAAAATATCA GCAATAAAAATGCCCGA TCATAAG TCGGGCATTTTTATTGG TCAGTACTAACAGTC TERM 1674 1266492 - 1266460 - Tf 100 -13.7 -3.3341 | opp_overlap 1266466, overlap 1266456 1266453 1266451 1266466 ACAAAATATCAGCAA TAAAAATGCCCGA TCATAAG TCGGGCATTTTTA TTGGTCAGTACTAAC TERM 1675 1266486 - 1266466 - Tf 100 -8.3 -5.15167 | opp_overlap 1266466, overlap 1266460 1266456 1266453 1266451 TATCAGCAATAAAAA TGCCCGA TCATAAG TCGGGCA TTTTTATTGGTCAGT TERM 1676 1266466 - 1266486 + TF 100 -9 -5.14163 | opp_overlap 1266466 1266460 1266456 1266453 1266451 TATCAGCAATAAAAA TGCCCGAT CATAA GTCGGGCA TTTTTATTGGTCAGT TERM 1677 1266532 - 1266549 + TF 72 -6.3 -4.35742 | gap 1 TTAACCTTGTACTTT CAC-CTGC ACC GCAGCGTG TTTTGCTCGTTCAAT purT 1267695 - 1266517 - | phosphoribosylglycinamide formyltransferase 2 TERM 1678 1267986 - 1267998 + GH 74 -7.7 -3.91897 | TGGAAGATGCACAGC GAGAG GCG CTCTC TTTGTGGCTGGCAGG TERM 1679 1268079 - 1268099 + GH 71 -9.7 -2.57211 | opp_overlap 1268091, overlap 1268078 CACAAGTGGTGGAAC CTTCCTCAG ATA CTGAGGACG ATTCTCAGGCAGCAT yebG 1267679 - 1268116 + | DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS (modular protein) TERM 1680 1268358 - 1268344 - g 73 -4.2 -4.73613 | TGATTACCAACAAAA CAGGGT TGT ACGCTG GGCTGACGATCAAAA yebF 1268171 - 1268539 + | hypothetical protein yebE 1268750 - 1269415 + | conserved hypothetical protein; putative inner membrane protein ptrB 1269504 - 1271579 + | protease II exoX 1272223 - 1271561 - | DNA exonuclease X EFER_1230 1272936 - 1272247 - | conserved hypothetical protein, putative carbon-nitrogen hydrolase EFER_1231 1273328 - 1273011 - | DNA polymerase III, theta subunit (modular protein) EFER_1232 1273380 - 1273754 + | conserved hypothetical protein, putative protein yobA precursor putative exported protein, putative copper resistance protein CopC TERM 1681 1274425 - 1274435 + G 70 -4.6 -4.44548 | overlap 1274428 TTTGCAGACCCGATG GGGG CAA CTCC TTTTGCTTAAATGTG yebZ 1273757 - 1274629 + | putative inner membrane protein yebZ, putative copper ion transport yebY 1274641 - 1274982 + | hypothetical protein TERM 1682 1275047 - 1275018 - g 91 -5.1 -5.45652 | gap 2, opp_overlap 1275018 ATTTCCAATAAAAAA CCGCCTCAGTTCT TTCACC AGAAC-G-GGCGG TTTTTAACATTTAAG TERM 1683 1275018 - 1275047 + G 75 -5.1 -4.70879 | gap 2, opp_overlap 1275018 ATTTCCAATAAAAAA CCGCCTCAGTTCT TTCACC AGAAC-G-GGCGG TTTTTAACATTTAAG EFER_1235 1275000 - 1275152 + | hypothetical protein TERM 1684 1275208 - 1275237 + F 81 -5.1 -5.10064 | gap 1, overlap 1275209 AAGAGCCATTTCCCT G-GACCGAATAC AGGAATC GTGTTCGGTCTC TTTTTATCTGTTAAA TERM 1685 1275209 - 1275235 + F 83 -8.8 -4.16832 | overlap 1275208 AGAGCCATTTCCCTG GACCGAATAC AGGAATC GTGTTCGGTC TCTTTTTATCTGTTA TERM 1686 1275403 - 1275374 - f 81 -5.1 -5.14563 | gap 1 CGCGGGAGGAAAAAA CTGATGAAACAGCC TGC GCCCGTTT-ATCAG AGAATTGCGGGTCAT pphA 1275377 - 1276033 + | serine/threonine-specific protein phosphatase 1 yebW 1276309 - 1276034 - | hypothetical protein TERM 1687 1276112 - 1276101 - G 72 -7.2 -4.21933 | opp_overlap 1276100 TCAATCGGAAAACAA CCGC CATG GCGG ATCCGTTGATCGTTC TERM 1688 1276302 - 1276318 + g 70 -5 -4.44608 | opp_overlap 1276302, overlap 1276299 AACCAGGATAAATAA CCCGCC ATGCC GACGGG TTCTTTTTGGATCAG TERM 1689 1276318 - 1276302 - G 74 -7.9 -4.12857 | opp_overlap 1276302 1276299 AACCAGGATAAATAA CCCGCCA TGC CGACGGG TTCTTTTTGGATCAG yebV 1276566 - 1276330 - | hypothetical protein TERM 1690 1276552 - 1276541 - G 70 -7.2 -4.13767 | TCGTCGATTTCAAAA GCGC CTAT GCGC ACACTGGTTTTCATC TERM 1691 1276649 - 1276668 + r 95 -3.4 -5.94713 | TTGAGGTAGCCGAAT GCGCCAGT CAAA ACGTGCGC TTTTTTTTGTGCGCT yebU 1278124 - 1276685 - | putative RNA AdoMet-dependent methyltransferase TERM 1692 1277479 - 1277489 + g 77 -6.8 -4.57569 | TTTCCTGATTGCTTT CTGG TGA CCAG TTTTTCAGCGCATCG TERM 1693 1277615 - 1277604 - G 70 -5.8 -4.26344 | ACACGGCCATCAAAA TGCG TGAG CGCA ACATTACGGATGCCA TERM 1694 1278196 - 1278171 - R 100 -14.7 -3.9712 | overlap 1278172 GCAGTTTAGCATAAA CGCTCCGGCGC AGGC ACGCCGGAGCA ATGGACATTATTTGG TERM 1695 1278195 - 1278172 - R 100 -16 -2.97951 | overlap 1278171 CAGTTTAGCATAAAC GCTCCGGCGC AGGC ACGCCGGAGC AATGGACATTATTTG yebT 1280837 - 1278204 - | hypothetical protein TERM 1696 1278248 - 1278269 + gr 72 -8.1 -3.78329 | gap 1, opp_overlap 1278263, overlap 1278252 GCCACTCTTTCGGTT CACTTTCCTG CAA CAGGAA-GTG TTTACCTTCCTGGGC TERM 1697 1279963 - 1279985 + gr 74 -3.2 -4.89477 | overlap 1279965 GAGTCGGCGGTTAAT CCGGCACCGC TCG GCAGTTCCAG TTTTATTATTACGCC yebS 1282089 - 1280806 - | conserved hypothetical protein; putative inner membrane protein TERM 1698 1281004 - 1280986 - GH 83 -8.8 -4.08111 | overlap 1280988 TAAAGATATGACAAA CAGGTCGA GCA TCGACCAG CGACCAATCCAGGTC TERM 1699 1281002 - 1280988 - GH 80 -10 -3.61777 | overlap 1280986 AAGATATGACAAACA GGTCGA GCA TCGACC AGCGACCAATCCAGG TERM 1700 1281850 - 1281828 - GH 74 -9.8 -3.14125 | overlap 1281826 1281847 GCCAGATATGCAACA GCGGTTCGCC CCA GGCAAACGGC ATCAGCAACAGCATG TERM 1701 1282147 - 1282171 + H 74 -6.6 -4.26903 | opp_overlap 1282158 TGATGGGAATGATCT TGAGCATTAA CGCAT TTAATGCTTA TTTTAATAGGCTGGC yebR 1282165 - 1282716 + | hypothetical protein TERM 1702 1282744 - 1282763 + F 86 -12.2 -3.1552 | overlap 1282742 GTAGCAATTACTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCGC TERM 1703 1283315 - 1283292 - g 70 -6.6 -4.07568 | overlap 1283308 GCCTCGCGCTGAAAA GCCCGCAGCG AAAG CACCACGAGC ACCTCGCGAAGAGAA proQ 1282813 - 1283502 + | ProP transporter amplifier prc 1283522 - 1285570 + | carboxy-terminal protease for penicillin-binding protein 3 TERM 1704 1285578 - 1285599 + F 100 -10.2 -5.75945 | opp_overlap 1285578 CTAAGTAATGTCAAA CAGGCACA AGATAA TGTGCCTG TTTTTTTTCACACGT TERM 1705 1285599 - 1285578 - f 82 -10.2 -3.69434 | opp_overlap 1285578 CTAAGTAATGTCAAA CAGGCACA AGATAA TGTGCCTG TTTTTTTTCACACGT TERM 1706 1285711 - 1285721 + F 71 -4.6 -4.65916 | opp_overlap 1285683, overlap 1285682 ATACGATGTGGGTTA CGCG TAG TGCG TTTTGTTAAACTGAG TERM 1707 1286201 - 1286172 - g 79 -10.1 -3.737 | gap 1, opp_overlap 1286190 TAATTGCTCATGAAA TCAGCCACATCGCC AAT GGCGACATGG-TGA CCATGACGCTGATTC TERM 1708 1286190 - 1286210 + G 70 -11.1 -2.71364 | opp_overlap 1286172 GCCACATCGCCAATG GCGACATGG TGA CCATGACGC TGATTCAGGGCGTGG htpX 1285751 - 1286632 + | membrane-associated Zn-dependent endopeptidase; self-cleaved TERM 1709 1286674 - 1286651 - T 100 -12.5 -5.52079 | opp_overlap 1286651 ATAGCAAAACAAAAA GAGCGCGTT CTGATT AACGCGCTC TTTTTTTACCCTTTC TERM 1710 1286651 - 1286674 + T 100 -12.5 -5.49809 | opp_overlap 1286651 ATAGCAAAACAAAAA GAGCGCGTT CTGATT AACGCGCTC TTTTTTTACCCTTTC yebQ 1288053 - 1286680 - | putative transporter; MFS superfamily TERM 1711 1287465 - 1287449 - G 72 -5.8 -4.4261 | CTGGGAAGATCAAAA CGCGGT TTGCT ACCACG AGAGCCATTTGGTGG TERM 1712 1288025 - 1288044 + g 70 -4.2 -4.66163 | gap 1, opp_overlap 1288002, overlap 1288025 1288026 TACCGTTGCGGCAAC G-GCAGGCC ATC GGCCTGAAC TTTTTGCATAAGAAT kdgR 1288229 - 1289011 + | DNA-binding transcriptional repressor KdgR EFER_1248 1289464 - 1289345 - | hypothetical protein yobG 1289603 - 1289758 + | hypothetical protein EFER_1250 1289832 - 1290119 + | conserved hypothetical protein, putative membrane protein TERM 1713 1290345 - 1290329 - f 85 -7.3 -4.82678 | overlap 1290337 GGACAAAAAGTAAAA TGCACTA ATT CAGTGCA ACAGAAAATATGTTG yobF 1290945 - 1291088 + | hypothetical protein TERM 1714 1291246 - 1291228 - g 70 -6.7 -4.09739 | overlap 1291229 GTAATGGCTTCAAAA CTCTGGC AGAAG GCCAGAA CGTTGAGTTCGAAAT cspC 1291101 - 1291310 + | stress protein, member of the CspA-family TERM 1715 1291287 - 1291303 + F 71 -9.5 -2.94099 | overlap 1291267 CAGAAAGGTCCGGCT GCTGTTA ACG TAACAGC TATCTGATCGAAACC TERM 1716 1291377 - 1291360 - f 100 -12.7 -3.92641 | opp_overlap 1291360 AATCTCAGCTATAAA GCCTCGC CAGT GCGAGGC TTTTTAACATCTGTA TERM 1717 1291360 - 1291377 + F 100 -12.7 -4.65838 | opp_overlap 1291360 AATCTCAGCTATAAA GCCTCGC CAGT GCGAGGC TTTTTAACATCTGTA rrmA 1291467 - 1292276 + | Ribosomal RNA large subunit methyltransferase A (rRNA (guanine-N(1)-)-methyltransferase) (23S rRNA m1G745 methyltransferase) TERM 1718 1292308 - 1292286 - T 93 -12 -3.58305 | overlap 1292287 AATTAACCGTGGAAA TGCGTCCAGA GGA TCTGGACGCC GATACCTATCAGTAC TERM 1719 1292307 - 1292287 - T 100 -15.5 -2.74501 | overlap 1292286 ATTAACCGTGGAAAT GCGTCCAGA GGA TCTGGACGC CGATACCTATCAGTA yebN 1292839 - 1292273 - | conserved hypothetical protein; putative inner membrane protein EFER_1255 1293081 - 1292836 - | hypothetical protein yobD 1293726 - 1293268 - | conserved hypothetical protein; putative inner membrane protein TERM 1720 1293603 - 1293585 - G 72 -6.6 -4.25256 | overlap 1293582 GCCCGACGAAAATAA CACTGTCG ATG CGACCGCG TCGGAGTAAAGGAAT TERM 1721 1293746 - 1293765 + r 74 -10.6 -2.62396 | opp_overlap 1293747 CCTCCAGATAAAAAA ACGGGGCC TAAA GGCCCCGG TAGTGTACAACAGTA TERM 1722 1293764 - 1293747 - R 100 -14.1 -5.71712 | opp_overlap 1293746 CTCCAGATAAAAAAA CGGGGCC TAAA GGCCCCG GTAGTGTACAACAGT manZ 1294641 - 1293781 - | mannose-specific enzyme IID component of PTS TERM 1723 1294582 - 1294596 + g 82 -2.8 -5.28778 | opp_overlap 1294583, overlap 1294583 GAAGACGCCACGAAT ATCACT CTG AGTGAG TTTTTTCTCGGTGGT manY 1295445 - 1294645 - | mannose-specific enzyme IIC component of PTS TERM 1724 1295526 - 1295495 - R 78 -9.6 -3.73936 | overlap 1295483 AAAGCTGATTAACAA TCAACAAAATGGTT ACTT ATCCATTTTGCTGA TCAGATCCATCATTT manX 1296478 - 1295507 - | fused mannose-specific PTS enzymes: IIA component ; IIB component TERM 1725 1296407 - 1296420 + g 70 -6.7 -4.08945 | TTCCTGCTCGCCTAA CAGCA TTTC TGCTG TTTTAAGCAACTGCT TERM 1726 1296985 - 1297018 + G 71 -11.1 -2.93348 | overlap 1296979 1296977 CGGGTTTGCTCACGC TTGTCGTTCTCGAGA TTGT TCTCGGGATCGATAA TCTGGTCTTCATCGC yoaE 1296912 - 1298498 + | putative membrane protein fused with conserved domain adrB 1300108 - 1298501 - | putative cyclic di-GMP phosphodiesterase TERM 1727 1298553 - 1298571 + g 73 -11.7 -2.72511 | overlap 1298546 1298552 TGCCGGGTGCCCGGG GGCTGGC TTCCT GCCAGCC ATTTGGGAAAATCGC TERM 1728 1298650 - 1298626 - G 70 -7.2 -4.12599 | opp_overlap 1298620 1298628 1298639 1298641, overlap 1298616 AATAACCTTGCAAAA TATGTACGCC GTGCT GGCGTAGATA CTTCGCCTGTTGTTG TERM 1729 1298838 - 1298825 - G 70 -5.9 -4.2828 | TTCCAGCCAGGAAAA CGAGC TATT GCCCG TACCAAAATCATCAA TERM 1730 1300220 - 1300194 - R 100 -17.4 -3.6003 | GAAAGCAGGGGTAAA TTCGCCCATCCG TTG CAGATGGGCGAA GGAAAAGTATTAGTC sdaA 1301594 - 1300230 - | L-serine deaminase I yeaB 1302356 - 1301778 - | putative NUDIX hydrolase pabB 1303720 - 1302359 - | aminodeoxychorismate synthase, subunit I yoaH 1303794 - 1303973 + | hypothetical protein EFER_1266 1304144 - 1304389 + | hypothetical protein TERM 1731 1304486 - 1304518 + G 71 -2.8 -4.78597 | gap 1, overlap 1304490 ATGATAAATATTCCT TTAACCGCAATGG GCCATCAG CC-TTGCGGTGAA TTTGTTTCTTGTTCC TERM 1732 1304587 - 1304599 + G 72 -6.3 -4.42062 | opp_overlap 1304579 TCAGATACCTGAACG TATCC AGG GGATA TTTGTTTCGACAATA EFER_1267 1304471 - 1305370 + | hypothetical protein TERM 1733 1305497 - 1305465 - T 87 -5.1 -5.44721 | gap 2, opp_overlap 1305463 1305492, overlap 1305492 ATGATGGCAAAAAAA TGGACGCTTT--TCT GATTT AGATGAAAGCGTCCA TGTCGATTTCTGCTG yoaC 1305915 - 1305526 - | hypothetical protein yoaB 1306431 - 1306087 - | hypothetical protein TERM 1734 1306187 - 1306197 + g 70 -5.4 -4.34737 | overlap 1306184 CCTGCGACAACCCAT GCAT CCC ATGC TTTATTCATTGCTGC TERM 1735 1306615 - 1306583 - R 80 -2.8 -5.52347 | gap 1, opp_overlap 1306583 AATAAAAGTAAAAAA GCACCATAT-CGT TTTTTATT ACGTATAGGGTGC TTAATCTTAAAGACA EFER_1270 1306896 - 1306684 - | hypothetical protein, putative exported membran protein, putative cation/multidrug efflux pump EFER_1271 1307105 - 1306893 - | hypothetical protein TERM 1736 1307526 - 1307514 - g 85 -3.3 -5.37043 | overlap 1307515 AGGCGATAGAAAAAA GCCAG CCG CTGGT GGTGGAAGCAGGAAC TERM 1737 1308790 - 1308801 + G 72 -4.4 -4.64846 | opp_overlap 1308790 GATCATCGAAGCTAA CAAC GGTC GTTG TTTTATGCTTTGTAC yoaA 1307402 - 1309312 + | putative ATP-dependent helicase yeaZ 1309370 - 1310065 + | putative peptidase yeaY 1310104 - 1310685 + | putative outer membrane-associated lipoprotein TERM 1738 1310707 - 1310731 + F 100 -14.4 -2.56596 | opp_overlap 1310707, overlap 1310711 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCGTTCATACGGCA TERM 1739 1310731 - 1310707 - f 100 -14.4 -5.27335 | opp_overlap 1310707 1310711 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCGTTCATACGGCA TERM 1740 1310711 - 1310727 + F 83 -9.4 -3.98826 | opp_overlap 1310707, overlap 1310707 TTAAAGAAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCGTTCATAC TERM 1741 1311845 - 1311857 + G 72 -7.7 -3.91144 | opp_overlap 1311844 1311841, overlap 1311848 1311849 TGAACAATAAAGAGT TCCAG CAG CTGGA TTTCTCCAGTCTGCA fadD 1310890 - 1312575 + | acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) TERM 1742 1312622 - 1312586 - f 100 -9.4 -4.59773 | opp_overlap 1312596, overlap 1312587 CCTGAGCGTTAAAAA TGACAAACAGCGCCGG TTAAT CCGGCGTTTTTTGTCG CCCACCAAAGAGAAC TERM 1743 1312621 - 1312587 - f 100 -12.9 -3.35542 | opp_overlap 1312596, overlap 1312586 CTGAGCGTTAAAAAT GACAAACAGCGCCGG TTAAT CCGGCGTTTTTTGTC GCCCACCAAAGAGAA TERM 1744 1312596 - 1312612 + F 100 -10.8 -5.24129 | opp_overlap 1312587 1312586 AAAAATGACAAACAG CGCCGG TTAAT CCGGCG TTTTTTGTCGCCCAC rnd 1312643 - 1313770 + | ribonuclease D TERM 1745 1313802 - 1313773 - T 81 -7.1 -4.65078 | gap 1, opp_overlap 1313771 1313775, overlap 1313743 1313777 ATACCCGCAATAAAA GCAATGGCCCGCAA TGT TAGCGGGCCAT-GT AACTTTTTATAGCGC TERM 1746 1313775 - 1313801 + T 77 -10.8 -2.88667 | opp_overlap 1313773 1313777, overlap 1313771 ACCCGCAATAAAAGC AATGGCCCGCAA TGT TAGCGGGCCATG TAACTTTTTATAGCG TERM 1747 1313799 - 1313777 - T 100 -13.4 -3.82261 | opp_overlap 1313775 1313771, overlap 1313773 CCGCAATAAAAGCAA TGGCCCGCAA TGT TAGCGGGCCA TGTAACTTTTTATAG ycfS 1314789 - 1313809 - | hypothetical protein mfd 1318376 - 1314930 - | transcription-repair coupling factor TERM 1748 1315481 - 1315465 - G 74 -8.7 -3.96932 | overlap 1315457 1315466 ATATACAGCGAGAAA CCGATGG TTT CCATCGA GCCGCTTTGTTCTTC TERM 1749 1315892 - 1315904 + g 70 -6.9 -4.01564 | GCACCAGTTCTGCCA GCCGT TCG GCGGC TTTCTGGATGTTTTC TERM 1750 1317259 - 1317272 + g 87 -4.5 -5.20333 | AGGAACTTACGCAGT GCATC CAGC GGTGC TTTTTGTTGTGCCTG TERM 1751 1318499 - 1318482 - R 95 -12.7 -3.30701 | opp_overlap 1318482, overlap 1318477 GTTTAGCAAATCGAA TCGCCCC GCCA GGGGCGA TGGCTTAGCGGGAGT TERM 1752 1318482 - 1318499 + r 86 -12.7 -2.52543 | opp_overlap 1318482 1318477 GTTTAGCAAATCGAA TCGCCCC GCCA GGGGCGA TGGCTTAGCGGGAGT ycfT 1319577 - 1318504 - | conserved hypothetical protein; putative inner membrane protein TERM 1753 1318922 - 1318907 - G 82 -9 -4.20768 | opp_overlap 1318921, overlap 1318919 ACGGCCAACAAAGAA GCCATC AGCA GATGGC GGCGCAACGGCACCG TERM 1754 1320569 - 1320556 - g 90 -8.1 -4.77157 | overlap 1320549 TTAAGCCAGCAAAAA CTGCC TGAA GGCAG CAAATGGCAGGACTG TERM 1755 1320663 - 1320675 + G 84 -10.5 -3.72453 | overlap 1320656 GCTGAGCCTGATTGT CGCCG TTG CGGCG TTTAACATTATTACT lolC 1319839 - 1321038 + | outer membrane-specific lipoprotein transporter subunit ; membrane component of ABC superfamily lolD 1321031 - 1321732 + | outer membrane-specific lipoprotein transporter subunit ; ATP-binding component of ABC superfamily lolE 1321732 - 1322976 + | outer membrane-specific lipoprotein transporter subunit ; membrane component of ABC superfamily ycfX 1323005 - 1323916 + | N-acetyl-D-glucosamine kinase TERM 1756 1323987 - 1324010 + G 91 -5.2 -5.40072 | AAAACAAACGCCATC TACGCGAACG ACTG CGTCAGCGTA TTTTTTTCAGAGACA cobB 1323932 - 1324753 + | deacetylase of acetyl-CoA synthetase, NAD-dependent ycfZ 1325675 - 1324890 - | conserved hypothetical protein; putative inner membrane protein ymfA 1326133 - 1325672 - | conserved hypothetical protein; putative inner membrane protein TERM 1757 1326160 - 1326181 + r 100 -13 -3.794 | opp_overlap 1326160 TTGCTAAATAAAAAA CGGGCGGT AATACC ACCGCCCG TTTGCTGAATTAACG TERM 1758 1326181 - 1326160 - R 100 -13.7 -5.63517 | opp_overlap 1326160 TTGCTAAATAAAAAA CGGGCGGTA ATAC CACCGCCCG TTTGCTGAATTAACG potD 1327237 - 1326191 - | polyamine transporter subunit ; periplasmic-binding component of ABC superfamily potC 1328028 - 1327234 - | polyamine transporter subunit ; membrane component of ABC superfamily TERM 1759 1327451 - 1327425 - G 70 -5.1 -4.34737 | overlap 1327426 TGACGAACGAAGAAA CTACCACGTCG TCCAT CGACAGGGTAA AGCTTAACACCCAGC potB 1328852 - 1328025 - | polyamine transporter subunit ; membrane component of ABC superfamily potA 1330002 - 1328866 - | polyamine transporter subunit ; ATP-binding component of ABC superfamily TERM 1760 1329621 - 1329647 + g 79 -3.6 -5.08824 | GCAACGCTTCCGTCA CACGGGGAGC AATTTCA GCTGCCGGTG TTTTTTGCATGCGCA pepT 1330251 - 1331477 + | peptidase T TERM 1761 1331487 - 1331523 + T 91 -7.4 -5.32699 | gap 1, opp_overlap 1331492, overlap 1331492 AATTAATCCTTACGT AAAAACTGCCGAATGGT TTCA ACCAC-CGGCAGTTTTC TTTTTTAGTCTTTAG TERM 1762 1331492 - 1331518 + T 95 -7.3 -5.45813 | gap 1, opp_overlap 1331492, overlap 1331487 ATCCTTACGTAAAAA CTGCCGAATGGT TTCA ACCAC-CGGCAG TTTTCTTTTTTAGTC TERM 1763 1331518 - 1331492 - T 100 -9.5 -4.66163 | gap 1, opp_overlap 1331492 1331487 ATCCTTACGTAAAAA CTGCCGAATGGT TTCA ACCAC-CGGCAG TTTTCTTTTTTAGTC yeaD 1332472 - 1331528 - | hypothetical protein TERM 1764 1332461 - 1332444 - G 100 -11.3 -5.81412 | opp_overlap 1332446 TTCAGGCAAAAAAAA GAGCGAC CGAA GTCGCTC TTAGAGATCACAGTA gapA 1333482 - 1332487 - | glyceraldehyde-3-phosphate dehydrogenase A TERM 1765 1333554 - 1333538 - H 73 -2.9 -5.09245 | GTAAAATTACAAAAA CCTTACG CAG CGTCAAG CGGAATCGTGTCAAT TERM 1766 1333704 - 1333691 - H 78 -2.4 -5.43414 | AGGAGAGATAAAAAA GTGA TGTGCG TCAC GAATCACAACCTGCC msrB 1333825 - 1334238 + | methionine sulfoxide reductase B yeaC 1334235 - 1334558 + | hypothetical protein TERM 1767 1334597 - 1334578 - T 70 -2.9 -5.03994 | gap 1, overlap 1334583 GGTGACAGACAAAAA CAGA-ACG GGTGA CGTGTCTG AAATTTGTCACCCGG pncA 1335297 - 1334620 - | nicotinamidase/pyrazinamidase TERM 1768 1334851 - 1334867 + gT 76 -3.6 -5.00616 | ATTATGTTCACGTAG CCACTC ATCCA GCGTGG TTTTTTGCCGCCGCC ansA 1336288 - 1335272 - | cytoplasmic L-asparaginase I TERM 1769 1336359 - 1336344 - R 100 -8.2 -4.93296 | opp_overlap 1336344 TCAGGATTATAAAAA GGCAGC ATTT GCCGCC TTTGGTTGAATACTC EFER_1298 1337114 - 1336404 - | conserved hypothetical protein; putative membraner exported protein TERM 1770 1337237 - 1337208 - RH 91 -4.9 -5.71712 | opp_overlap 1337208 CTGGAGACAAAAAAA TGTGGCCGCAGAA GAAT TTCATTGGCCACA TAATTTGCTGATTTA sppA 1339385 - 1337250 - | protease IV (signal peptide peptidase) TERM 1771 1338257 - 1338241 - GH 71 -10.1 -2.62184 | opp_overlap 1338254 1338255 GCTTTTTCGACATCA GCACTGG AGC CCAGCGC ATCAACCAGTTTATG TERM 1772 1339143 - 1339129 - GH 74 -10 -3.08032 | opp_overlap 1339119 1339140, overlap 1339126 CCCTTCGTAAAATTA CGTCTG GTA CAGACG CATAAGATGTGGCTA ydjA 1339267 - 1339818 + | putative oxidoreductase TERM 1773 1339829 - 1339875 + FH 93 -12.5 -3.1552 | gap 1, opp_overlap 1339833 1339834, overlap 1339828 TTTAAAAATATCCTG GAAACTGTCTGGATTCT-GAGC AAAG GCTCCAGAATCCGGACACTCTC TCTTACTACATAACG TERM 1774 1339871 - 1339833 - fH 80 -9.7 -3.58731 | gap 1, opp_overlap 1339829 1339828, overlap 1339834 AAAATATCCTGGAAA CTGTCTGGATTCT-GAGC AAAG GCTCCAGAATCCGGACAC TCTCTCTTACTACAT TERM 1775 1339870 - 1339834 - fH 91 -13.2 -2.74515 | gap 1, opp_overlap 1339829 1339828, overlap 1339833 AAATATCCTGGAAAC TGTCTGGATTCT-GAGC AAAG GCTCCAGAATCCGGACA CTCTCTCTTACTACA selD 1339935 - 1340978 + | selenophosphate synthase TERM 1776 1342126 - 1342113 - g 74 -3.1 -4.91109 | gap 1, overlap 1342092 TTGGGATGACAAAAA GGT-CG ATG CGCACC ACGCCATCATCCCGA topB 1340956 - 1342938 + | DNA topoisomerase III TERM 1777 1342979 - 1343009 + F 100 -7 -5.81412 | opp_overlap 1342979 AGTCATATTCTGAAA TATCCAGCGGAT CAAGAAA ATTCGTTGGATA TTTTTTTTGCATGGA TERM 1778 1344085 - 1344070 - g 72 -7.6 -3.96148 | TTGGCCCATCAGAAA TGTTCC CTGG GGAACA TCATCCGTTAAATAC ynjI 1343066 - 1344106 + | conserved hypothetical protein; putative inner membrane protein gdhA 1345566 - 1344223 - | glutamate dehydrogenase, NADP-specific TERM 1779 1345179 - 1345216 + g 81 -7 -4.64657 | gap 2 GATCGAAGTCACTTC CGCCTTTACCGC-C-GCC CATA GGCAGAGTGGTCAGGGCG TTTTTGAAGGTTTGC TERM 1780 1345491 - 1345519 + g 70 -4.6 -4.44915 | gap 1 CTTCACGAACGGCTT GCGCGAATTCG GTCTGATG CGGAT-CGCGC TTTTGTACATGGTTG EFER_1305 1345917 - 1346192 + | conserved hypothetical protein; putative exported protein, putative ynjH protein nudG 1346565 - 1346152 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase TERM 1781 1346625 - 1346646 + rH 79 -10.9 -3.07522 | GACCAGGTGCGCTTG TTCATGCCG GATG CGGCGTGAA TGTATTACCCGGTCT EFER_1307 1346829 - 1346677 - | hypothetical protein TERM 1782 1347275 - 1347293 + Gr 72 -6 -4.35604 | CGGGTTAACCGAAGG CAGCGAGA CGA TTTTGCTG TTTGTTCTGAGTTGC TERM 1783 1347396 - 1347422 + Gr 77 -10.8 -2.75803 | GTGTGGAGTGGGTAT CTGACGCTGAAG TCG CTCCAGCGCCAG TAATTGCAATGTTAT ynjF 1346805 - 1347425 + | putative phosphatidyl transferase, inner membrane protein ynjE 1348741 - 1347434 - | putative exported thiosulfate sulfur transferase / thiosulfate binding protein TERM 1784 1348307 - 1348327 + g 70 -4.5 -4.56597 | opp_overlap 1348309, overlap 1348309 CCATTGCGGGTAAAC CAGCTGCTC AAA GTGCGGCAG TTTTTGCAGACGGGA ynjD 1349461 - 1348808 - | putative sulfate/thiosulfate transporter subunit: ATP-binding component of ABC superfamily transporter ynjC 1350951 - 1349461 - | fused putative transporter subunits of ABC superfamily: membrane components ynjB 1352135 - 1350969 - | hypothetical protein TERM 1785 1351086 - 1351100 + g 70 -3.5 -4.59773 | TTGTAAAGTTTCGCG CTGTC CGTCA GGCAG TTTTTGCGGATCGAG TERM 1786 1351297 - 1351309 + g 95 -9.1 -5.14965 | opp_overlap 1351297 CTGCTTGCCGGCAAA TCGCC ACT GGCGA TTTTTTGCTGGGCAT TERM 1787 1351309 - 1351297 - G 71 -9.1 -3.53012 | opp_overlap 1351297 CTGCTTGCCGGCAAA TCGCC ACT GGCGA TTTTTTGCTGGGCAT ynjA 1352693 - 1352145 - | hypothetical protein TERM 1788 1352293 - 1352272 - G 77 -8.7 -4.11216 | GCCTGAGCGTCAAAA TGCGTAGCC AGTC GGGTACGCA GGGCAGCATCGACTG ydjZ 1353397 - 1352693 - | conserved hypothetical protein; putative inner membrane protein TERM 1789 1353075 - 1353062 - G 79 -2.3 -5.24129 | overlap 1353067 TCTGGCGATAAAAAA GCACA GCGC CGCGC CCGCCATCGAACTGG TERM 1790 1353326 - 1353296 - G 78 -8.9 -4.15044 | overlap 1353316 GCTGCTGTTAATAAA CTCACGGACGCCG GGAAT CAGCGCCCATGCG AGCAGCGCAACAATT ydjX 1354105 - 1353401 - | conserved hypothetical protein; putative membrane protein, putative DedA family protein TERM 1791 1354257 - 1354223 - R 73 -8.5 -3.63991 | opp_overlap 1354222, overlap 1354224 GATTATCCTCAAGAA TCGGCCTCCTGACCT GGAGG ATGTCAGGAGGCTGC GTCATTAGCGGCGGA TERM 1792 1354256 - 1354224 - R 83 -12 -2.78073 | opp_overlap 1354222, overlap 1354223 ATTATCCTCAAGAAT CGGCCTCCTGACCT GGAGG ATGTCAGGAGGCTG CGTCATTAGCGGCGG xthA 1355068 - 1354262 - | exonuclease III TERM 1793 1355210 - 1355228 + H 79 -11 -2.92792 | overlap 1355207 CGCTTTTGGTGCGCG CTGCGTCA GAA TGGCGCAG TAATTTCCAGTAAAT astC 1355514 - 1356734 + | succinylornithine transaminase, PLP-dependent TERM 1794 1357631 - 1357668 + G 78 -8.3 -4.19735 | gap 1, opp_overlap 1357622 AATTATCACCATTTC CGCGTGGT-GCTGGTGCG TAC CGATCCAGCGACCGAGCG TTTGATTTTAACCGC astA 1356731 - 1357765 + | arginine succinyltransferase astD 1357762 - 1359240 + | succinylglutamic semialdehyde dehydrogenase TERM 1795 1359969 - 1359950 - g 72 -7 -4.25104 | opp_overlap 1359950 1359962 TTTCGCCCAGCAAAA CCCGGACG TTAT CGACCAGG GCGTTTTTCATAATG TERM 1796 1360385 - 1360365 - g 70 -6.8 -4.06864 | TTGACAGAAGAAGAA CGCCGG GCGGTGAAT CCGGCG GTGATGATGAACGAT astB 1359237 - 1360580 + | succinylarginine dihydrolase TERM 1797 1360625 - 1360612 - g 81 -4.5 -5.055 | opp_overlap 1360601, overlap 1360613 TTAACGGGTAAAAAA CCGGT TATC ACCGA GCGAGAAATCAACGG astE 1360573 - 1361541 + | succinylglutamate desuccinylase TERM 1798 1361574 - 1361542 - f 71 -8.6 -3.43246 | gap 1, opp_overlap 1361541 1361546, overlap 1361544 1361545 GAAAAAATAAGCTAA TACTTACCCGCAGAA ATCA TTCTGCGGGTAT-TA AGTTACTTTCTTATA TERM 1799 1361573 - 1361544 - f 74 -9.3 -3.25449 | opp_overlap 1361541 1361546, overlap 1361542 1361545 AAAAATAAGCTAATA CTTACCCGCAGAA ATCA TTCTGCGGGTATT AAGTTACTTTCTTAT TERM 1800 1361572 - 1361545 - f 90 -12.8 -2.53642 | opp_overlap 1361541 1361546, overlap 1361544 1361542 AAAATAAGCTAATAC TTACCCGCAGAA ATCA TTCTGCGGGTAT TAAGTTACTTTCTTA TERM 1801 1361546 - 1361571 + F 100 -16.3 -3.2827 | opp_overlap 1361545 1361544 1361542, overlap 1361541 AAATAAGCTAATACT TACCCGCAGAA ATCA TTCTGCGGGTA TTAAGTTACTTTCTT spy 1361871 - 1362356 + | envelope stress induced periplasmic protein TERM 1802 1362430 - 1362380 - f 100 -18.3 -3.06261 | opp_overlap 1362378 1362380 CCTCAACGCTTAAGA CCGCCGGTCTTGTCCACTACCTT GTAAT AAGGAGGTGGACAGGATCGGCGG TTTTTTTTGACACCT TERM 1803 1362380 - 1362430 + F 100 -25.6 -5.75945 | opp_overlap 1362380, overlap 1362378 CCTCAACGCTTAAGA CCGCCGGTCTTGTCCACTACCTTG TAA TAAGGAGGTGGACAGGATCGGCGG TTTTTTTTGACACCT TERM 1804 1362809 - 1362820 + G 72 -4.4 -4.62069 | CACCTTGAAACAGTT GCAA CCTT TTGC TTTTTCCGGTGAGCA ydjR 1362549 - 1363139 + | hypothetical protein ydjQ 1363986 - 1363099 - | endonuclease of nucleotide excision repair nadE 1365080 - 1364253 - | NAD synthetase, NH3/glutamine-dependent TERM 1805 1364655 - 1364666 + g 73 -3.6 -4.8622 | GTACTGTGCTTTCAT GCGC TCAC GTGC TTTTTCATTGCCGCG osmE 1365282 - 1365620 + | DNA-binding transcriptional activator TERM 1806 1365670 - 1365653 - f 84 -11.3 -3.11182 | opp_overlap 1365653, overlap 1365651 1365650 CTGAACAAACAAGGA GCCGACA CCAG TGTCGGC TTTTTTCTGTTCAGA TERM 1807 1365653 - 1365670 + F 100 -11.3 -5.47159 | opp_overlap 1365653 1365651 1365650 CTGAACAAACAAGGA GCCGACA CCAG TGTCGGC TTTTTTCTGTTCAGA chbB 1365917 - 1366237 + | N,N'-diacetylchitobiose-specific enzyme IIB component of PTS TERM 1808 1366285 - 1366302 + F 100 -9.9 -4.43221 | TTTCATAAACTTTCA CCGCAAT ATTT ATTGCGG TTTTATAGGGTATTT chbC 1366322 - 1367680 + | N,N'-diacetylchitobiose-specific enzyme IIC component of PTS chbA 1367733 - 1368083 + | N,N'-diacetylchitobiose-specific enzyme IIA component of PTS TERM 1809 1368200 - 1368188 - g 71 -3.4 -4.79352 | opp_overlap 1368188 TTATCTACAATAAAA CTGA AAGTA TCAG TGGGTTGCATCAGCA chbR 1368091 - 1368933 + | DNA-binding transcriptional dual regulator TERM 1810 1368992 - 1368980 - f 71 -9.1 -3.38812 | opp_overlap 1368980 1368979 1368975, overlap 1368978 TGCCTTTTAATAACA CTGGC AGT GCCAG GTTATTCCTGACAGA chbF 1369054 - 1370406 + | cryptic phospho-beta-glucosidase, NAD(P)-binding chbG 1370419 - 1371177 + | hypothetical protein TERM 1811 1371182 - 1371222 + T 78 -9.8 -3.5394 | gap 1, opp_overlap 1371182 1371183, overlap 1371184 1371190 TTGATGTGTAAGTAA GGTGG-TAAGGTCACTCCC TTGG GGGCGTGACCTTATCCATA TTTACGCAGGAATTT TERM 1812 1371221 - 1371183 - T 76 -11.1 -2.60723 | gap 1, opp_overlap 1371182 1371184 1371190, overlap 1371182 TGATGTGTAAGTAAG GTGG-TAAGGTCACTCCC TTGG GGGCGTGACCTTATCCAT ATTTACGCAGGAATT TERM 1813 1371184 - 1371220 + T 100 -14.6 -3.34517 | gap 1, opp_overlap 1371183 1371182, overlap 1371182 1371190 GATGTGTAAGTAAGG TGG-TAAGGTCACTCCC TTGG GGGCGTGACCTTATCCA TATTTACGCAGGAAT TERM 1814 1371190 - 1371213 + T 100 -12.4 -3.452 | opp_overlap 1371183 1371182, overlap 1371184 1371182 TAAGTAAGGTGGTAA GGTCACTCCC TTGG GGGCGTGACC TTATCCATATTTACG katE 1373485 - 1371224 - | hydroperoxidase HPII(III) (catalase) EFER_1336 1373581 - 1373730 + | hypothetical protein cedA 1373669 - 1373932 + | cell division modulator TERM 1815 1373958 - 1373938 - T 100 -12.6 -5.95946 | opp_overlap 1373938 CGAAGAATAAAAAAA CGCCTGTC GGGAT GACAGGCG TTTAACGTAACAAAT TERM 1816 1373938 - 1373958 + T 100 -13.3 -3.60098 | opp_overlap 1373938 CGAAGAATAAAAAAA CGCCTGTCG GGA TGACAGGCG TTTAACGTAACAAAT ydjN 1375370 - 1373979 - | putative cation-acid symporter TERM 1817 1374013 - 1374023 + g 70 -5.4 -4.34932 | GCGTCTTCTTCACTA TCCA GAA TGGA TTTATCTGTTTGTTT TERM 1818 1374884 - 1374869 - G 74 -3.2 -4.90302 | overlap 1374872 1374873 TAGGAATAAAAGAAA GCACCA GCTG TGGCAC GCTGAGGTCGGCAAC ydjM 1376092 - 1375502 - | conserved hypothetical protein; putative inner membrane protein regulated by LexA TERM 1819 1375635 - 1375579 - G 75 -11.3 -3.10715 | gap 3 GTGATGACCAGCGAA CGGCACTATTT-TCTGG-CAGTGTGTGA GGCA TC-CACACTGACCAGACAAACAATGCCA TGCAGAGAAAACGCT TERM 1820 1375705 - 1375695 - G 72 -4.6 -4.67641 | ATCGGAAAACGAAAA CGCC AAC GGCA GGGCCAGAGCAGGGG TERM 1821 1375865 - 1375852 - G 75 -4.5 -4.7629 | overlap 1375855 TCAGTAACGCAAAAA CAGCC AACA GACTG TGGGTAAATCCCCGG TERM 1822 1375958 - 1375937 - G 77 -5.8 -4.65895 | GCGCTGACCTAAAAA CGACTTCG GATGAT CGATGTCG GGCAGTAAACAGGTC TERM 1823 1376083 - 1376071 - G 85 -3.3 -5.38951 | AAGCTATAGAAAAAA GGAGG TGA CCTTC CGCCGTCATGATAAA TERM 1824 1376220 - 1376246 + r 100 -16.8 -2.70932 | opp_overlap 1376220 CCGGAAGCGTAAAAA TTATGGGCAATG AAG CATTGCCCATAA TAATTCAGCCGCGAA TERM 1825 1376246 - 1376220 - R 100 -16.8 -4.66833 | opp_overlap 1376220 CCGGAAGCGTAAAAA TTATGGGCAATG AAG CATTGCCCATAA TAATTCAGCCGCGAA yniC 1376919 - 1376251 - | putative phosphoglycolate phosphatase TERM 1826 1376480 - 1376490 + g 71 -3.2 -4.84359 | overlap 1376478 TGTGGATGTGGCTTG CTGT AGG GCAG TTTTTCTGCGGATGC TERM 1827 1377225 - 1377186 - g 71 -3.4 -4.7629 | opp_overlap 1377188, overlap 1377187 1377188 TTATGAATGCAAAAA CCGTCGAGCAGGAAGGCA TTAA TGCCGTAATGCTCGACTT TACCCATGTCATGAT TERM 1828 1377188 - 1377223 + G 77 -10.4 -3.59738 | opp_overlap 1377188 1377187 1377186 ATGAATGCAAAAACC GTCGAGCAGGAAGGCA TTAA TGCCGTAATGCTCGAC TTTACCCATGTCATG TERM 1829 1377330 - 1377350 + G 71 -2.5 -4.89852 | overlap 1377333 GTATGAATATTATGT TCTGGGTGA TAT TTATCCTGA TTTTTGTCGGTCTGG TERM 1830 1377498 - 1377515 + G 74 -2.7 -4.90296 | overlap 1377495 TTGAGTCTCGCATTG TGGTG CCACATCA CACCA TTTTTCTGCAATTTT yniB 1377068 - 1377604 + | conserved hypothetical protein; putative inner membrane protein TERM 1831 1377648 - 1377613 - T 100 -15.5 -3.61268 | gap 1, opp_overlap 1377610 1377642, overlap 1377615 1377636 1377637 TATTTAACGCTTAAA CAGGCCGGAGTGCGTA ACAAA TACGC-CTCCGGCCAG GCCGTTATGCCGCCA TERM 1832 1377646 - 1377615 - T 100 -16.7 -3.38314 | gap 1, opp_overlap 1377610 1377642, overlap 1377613 1377636 1377637 TTTAACGCTTAAACA GGCCGGAGTGCGTA ACAAA TACGC-CTCCGGCC AGGCCGTTATGCCGC yniA 1378513 - 1377653 - | putative phosphotransferase/kinase EFER_1343 1378934 - 1378623 - | conserved hypothetical protein, putative ydiZ protein TERM 1833 1378897 - 1378909 + g 77 -3.3 -5.10077 | ACGTAACGAGTGACA TCGCC GCT GGCCA TTTTTTCACCTCTTT TERM 1834 1379005 - 1379022 + r 81 -11.3 -2.80791 | opp_overlap 1379004 1379001, overlap 1379001 1379001 CGTAGCGGAAATTAT TGCCTGG TAAG CCAGGCA TAGATTTTGTGAGTG pfkB 1379933 - 1379001 - | 6-phosphofructokinase II TERM 1835 1380177 - 1380193 + H 100 -6.5 -5.88565 | CCTATGAAAGTTTCC GGGACCG TTA TGGTCTC TTTTTTTGTTGTGCG ydiY 1380221 - 1380979 + | hypothetical protein TERM 1836 1382400 - 1382390 - g 71 -2.4 -5.00616 | TCCTGTGGGAAAAAA CCGG TCA CTGG GAAAACTACAAAGAT thrS 1381471 - 1383399 + | threonyl-tRNA synthetase TERM 1837 1383803 - 1383779 - f 72 -6.4 -4.39571 | gap 1 GTGATAAAGCCAAAA TCACG-CTGCG TTTC CGCGGTCGTGA GATGGCGCACCAGCA TERM 1838 1383963 - 1383990 + F 100 -14.2 -4.23707 | opp_overlap 1383958, overlap 1383984 CCTTCAAGTAGCACT GTCTGTGGAGCC TTTG GGCTTCACAGGC TTTGTTCGCCTTTGT rpmI 1384042 - 1384239 + | 50S ribosomal subunit protein L35 rplT 1384292 - 1384648 + | 50S ribosomal subunit protein L20 TERM 1839 1384678 - 1384660 - f 82 -10.3 -3.62418 | opp_overlap 1384660 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC TERM 1840 1384660 - 1384678 + F 100 -10.3 -4.54727 | opp_overlap 1384660 ATAAGCCAGTTGAAA GAGGGAG CTAGT CTCCCTC TTTTCGTTTCAACGC pheM 1384771 - 1384815 + | phenylalanyl-tRNA synthetase operon leader peptide TERM 1841 1384880 - 1384865 - f 80 -10.4 -3.55815 | opp_overlap 1384865 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1842 1384865 - 1384880 + F 100 -10.4 -5.71712 | opp_overlap 1384865 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC TERM 1843 1385216 - 1385204 - g 71 -2.6 -5.0133 | TATTTGGGTAAAAAA GGGC ACTTA ACCC TTCAGATGACGACCC TERM 1844 1385272 - 1385255 - g 76 -9.1 -3.78934 | gap 1, opp_overlap 1385255 1385254 CTGCCGCCAGAAGAA CGC-CCGG CAG CCGGTGCG GTTATCAACGAAGCG pheS 1385099 - 1386082 + | phenylalanine tRNA synthetase, alpha subunit pheT 1386097 - 1388484 + | phenylalanine tRNA synthetase, beta subunit ihfA 1388489 - 1388788 + | integration host factor (IHF), DNA-binding protein, alpha subunit TERM 1845 1388820 - 1388806 - f 100 -12.8 -4.88407 | opp_overlap 1388806 TGATCTAACTAAAAA GGCCGC TTT GCGGCC TTTTTTCTTTTCACT TERM 1846 1388806 - 1388820 + F 100 -12.8 -5.80951 | opp_overlap 1388806 TGATCTAACTAAAAA GGCCGC TTT GCGGCC TTTTTTCTTTTCACT TERM 1847 1389822 - 1389834 + G 75 -5.5 -4.62957 | GTAGTGACGGCTACG CTGGG CGC TCCAG TTTTCATTTGGTTAT btuC 1388889 - 1389869 + | vitamin B12 transporter subunit: membrane component of ABC superfamily TERM 1848 1390135 - 1390147 + G 90 -4.8 -5.4251 | ATCCACCTTTTGCAA TGCC TGTCT GGCA TTTTTTATCTCTACA btuD 1389873 - 1390622 + | Vitamin B12 ABC transporter nlpC 1390700 - 1391164 + | putative peptidase lipoprotein TERM 1849 1391157 - 1391140 - f 85 -4.1 -5.42259 | TTACTGGCAAAAAAA CTTCTGG CAGG CGAGAAG AATTTAATCGAACGA TERM 1850 1391487 - 1391497 + G 81 -6.8 -4.66264 | opp_overlap 1391486 TCAAAATAAACTGAT CGGT TTA ACCG TTTTTACCAATTTTG EFER_1357 1391365 - 1392120 + | conserved hypothetical protein, putative EAL domain TERM 1851 1392850 - 1392876 + G 72 -8.7 -3.73647 | ATGCGATCTGGTTTC GTGATGTCGTC GCGCG GACGGCTTCAC TTATTGCTGGCTGGC ydiU 1392186 - 1393628 + | hypothetical protein TERM 1852 1393678 - 1393649 - T 72 -10.1 -2.82895 | gap 1, opp_overlap 1393650, overlap 1393648 1393652 TTTGTTAGCAATAAC TTACCTGCCTGCGT TTT ACGCA-GCAGGTAT TCCTGACCGTCATGA TERM 1853 1393650 - 1393677 + T 100 -13.6 -3.15861 | gap 1, opp_overlap 1393649 1393648 1393652 TTGTTAGCAATAACT TACCTGCCTGCGT TTT ACGCA-GCAGGTA TTCCTGACCGTCATG TERM 1854 1393675 - 1393652 - T 83 -11.8 -2.67428 | gap 1, opp_overlap 1393650, overlap 1393649 1393648 GTTAGCAATAACTTA CCTGCCTGCGT TTT ACGCA-GCAGG TATTCCTGACCGTCA EFER_1359 1393827 - 1393630 - | hypothetical protein TERM 1855 1393737 - 1393767 + g 100 -5.3 -6.4275 | overlap 1393730 1393741 ACAACGTTTTACTGG CTATCCGCCGTAC GGGCG GTGTGGCGGTAAG TTTTTTTTCTTTTTC TERM 1856 1393949 - 1393924 - R 100 -11.8 -4.42974 | overlap 1393926 GGGAGAGAGAAGAAA CGGCCCGCTC AGGTAA GAGCGGGCAG TCAGTCAGAAGCGGC TERM 1857 1393947 - 1393926 - R 90 -13 -2.54314 | overlap 1393924 GAGAGAGAAGAAACG GCCCGCTC AGGTAA GAGCGGGC AGTCAGTCAGAAGCG aroH 1395000 - 1393954 - | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible TERM 1858 1394697 - 1394712 + g 77 -6.1 -4.60041 | opp_overlap 1394672 1394669 TGAGTCCTTTCCAGC CCACG ACGGTA CGTGG TTTTTCAAAATAGGT TERM 1859 1395107 - 1395149 + r 70 -9.9 -2.53911 | gap 1 TTGTTGACTTCATGT CTTCA-CCCCATTCACAGGG TTTA CTCTGTGACTGGGGGTGCGG TCAGTTGCCGATTCG ydiA 1396116 - 1395283 - | hypothetical protein TERM 1860 1398145 - 1398158 + G 72 -5.9 -4.37092 | overlap 1398144 CAGAAGGTATTGCTA CGCTG GGAG CGGCG TTTTATCCGAAGCGT pps 1396452 - 1398830 + | phosphoenolpyruvate synthase TERM 1861 1398851 - 1398880 + T 100 -17.3 -5.67063 | opp_overlap 1398851 CAACGTGATCGACAA GCAGTGTTGTCAC AATT GTGGCAACACTGC TTTTTTTATGGTGCG TERM 1862 1398880 - 1398851 - T 100 -15.1 -3.36803 | opp_overlap 1398851 CAACGTGATCGACAA GCAGTGTTGTCAC AATT GTGGCAACACTGC TTTTTTTATGGTGCG EFER_1363 1399404 - 1398901 - | hypothetical protein TERM 1863 1399402 - 1399383 - G 100 -9.3 -5.82388 | AAATGTTAAAAAAAA GCCCATC GTGGGA GATGGGC AAAGACTACACACAG TERM 1864 1399613 - 1399639 + r 75 -7.2 -4.31688 | opp_overlap 1399616, overlap 1399614 1399616 CGGGGATGAAAAGAA AAACCGGGCAGA TTA TTTGCCCGGTGA TTTTGACTTAATGTT TERM 1865 1399614 - 1399638 + r 79 -10.7 -3.17928 | opp_overlap 1399616, overlap 1399613 1399616 GGGGATGAAAAGAAA AACCGGGCAGA TTA TTTGCCCGGTG ATTTTGACTTAATGT TERM 1866 1399616 - 1399636 + r 100 -13.3 -3.14307 | opp_overlap 1399616, overlap 1399614 1399613 GGATGAAAAGAAAAA CCGGGCAGA TTA TTTGCCCGG TGATTTTGACTTAAT TERM 1867 1399636 - 1399616 - R 100 -11.1 -5.50723 | opp_overlap 1399616 1399614 1399613 GGATGAAAAGAAAAA CCGGGCAGA TTA TTTGCCCGG TGATTTTGACTTAAT ydiK 1400759 - 1399647 - | conserved hypothetical protein; putative inner membrane protein TERM 1868 1401920 - 1401936 + G 72 -7.9 -3.96327 | ATTCGTTTGATTCCG CGCTGCG TAA CGCACCG TTTATGGTCGAAGCT TERM 1869 1402308 - 1402328 + G 72 -8.9 -3.724 | opp_overlap 1402301, overlap 1402309 TGAGGATACCTGCGT ACCGCCGGA ACA TCTGGCGGA TTATATTGCTGAATT TERM 1870 1402309 - 1402327 + G 77 -12.4 -2.82717 | opp_overlap 1402301, overlap 1402308 GAGGATACCTGCGTA CCGCCGGA ACA TCTGGCGG ATTATATTGCTGAAT TERM 1871 1403396 - 1403382 - g 78 -5.6 -4.85918 | overlap 1403383 1403386 GACTACAGAACAAAA GGCACG GAC CGTGCT GGTGGTGCAGGACCC TERM 1872 1403395 - 1403383 - g 71 -9.1 -3.50466 | overlap 1403382 1403386 ACTACAGAACAAAAG GCACG GAC CGTGC TGGTGGTGCAGGACC ydiJ 1401028 - 1404084 + | putative conserved FAD-linked oxidoreductase ydiI 1404081 - 1404491 + | putative esterase TERM 1873 1404537 - 1404568 + F 74 -8.1 -4.07568 | opp_overlap 1404537 1404538, overlap 1404538 TGCTTTTGGTCATAA TCTGCACAGTAAA AGGTGA TATACTGTGCAGG TTTTGAACAAAAGCG TERM 1874 1404538 - 1404567 + F 71 -9.4 -3.04398 | opp_overlap 1404537 1404538, overlap 1404537 GCTTTTGGTCATAAT CTGCACAGTAAA AGGTGA TATACTGTGCAG GTTTTGAACAAAAGC TERM 1875 1405051 - 1405031 - f 86 -7.6 -4.58283 | opp_overlap 1405019 1405031, overlap 1405048 TAAGCCGTTTAAAAA GGGGCTTT TGGCG AAAACCCC TTTGGTCGCGGGGTT sufA 1405132 - 1405500 + | Fe-S cluster assembly protein TERM 1876 1405848 - 1405859 + G 81 -7.2 -4.65895 | opp_overlap 1405847 GCGGTGCAGCAAACT GGCG CGAA CGCC TTTTTAAGTAAAGAG sufB 1405509 - 1406996 + | component of SufBCD complex TERM 1877 1407698 - 1407677 - gf 73 -10.3 -2.51464 | opp_overlap 1407677, overlap 1407676 GTATCAGGGACGAAT TGTGAAATC CGGC GATTTCACA TTGGTCAAACAACTG TERM 1878 1407677 - 1407698 + GF 77 -10.3 -3.14344 | opp_overlap 1407677 1407676 GTATCAGGGACGAAT TGTGAAATC CGGC GATTTCACA TTGGTCAAACAACTG sufC 1407006 - 1407752 + | component of SufBCD complex, ATP-binding component of ABC superfamily TERM 1879 1407967 - 1407985 + GF 77 -3 -5.1356 | opp_overlap 1407970, overlap 1407968 1407970 GCCTTAGCGTTAACA TTAGACGC GGT GCGGCTGG TTTTTGTTGATGGAC sufD 1407727 - 1408998 + | component of SufBCD complex sufS 1408995 - 1410215 + | selenocysteine lyase, PLP-dependent sufE 1410228 - 1410644 + | sulfur acceptor protein TERM 1880 1410963 - 1410942 - g 71 -2.1 -4.88388 | opp_overlap 1410943 1410945, overlap 1410943 AGAAGGGGATAAAAA CCTTCAGGC CATC GCCCGACGT TTTGATACTGCGGCA ynhG 1410793 - 1411794 + | hypothetical protein TERM 1881 1411808 - 1411826 + T 100 -14.6 -3.83026 | opp_overlap 1411808 AAAAAGCAAAAAAAA TGGCGCAC AAC GTGCGCCA TTTGCTCTAACACAG TERM 1882 1411826 - 1411808 - T 100 -14.6 -6.11019 | opp_overlap 1411808 AAAAAGCAAAAAAAA TGGCGCAC AAC GTGCGCCA TTTGCTCTAACACAG lpp 1412084 - 1411848 - | murein lipoprotein TERM 1883 1411922 - 1411947 + g 70 -9.7 -3.17212 | gap 1 CTTTAGCAGCCTGAA CGTCG-GAACGC ATT GCGTTCACGTCG TTGCTCAGCTGGTCA TERM 1884 1412361 - 1412347 - R 100 -8.5 -6.04953 | opp_overlap 1412347 ACAGAAATAAAAAAA GCGCC GCAAG GGCGC TTTCCTGGATAAATT TERM 1885 1412347 - 1412361 + r 75 -8.5 -3.76968 | opp_overlap 1412347 ACAGAAATAAAAAAA GCGCC GCAAG GGCGC TTTCCTGGATAAATT pykF 1413805 - 1412393 - | pyruvate kinase I ydhZ 1414319 - 1414528 + | hypothetical protein TERM 1886 1414562 - 1414533 - T 84 -11.5 -3.17146 | opp_overlap 1414534, overlap 1414531 1414529 1414534 TTGCGGGATAACAGA GCTGGAGATGACA ATCT TGCCATCTCCAGT TTTTCTATTCTTCGG TERM 1887 1414534 - 1414561 + T 100 -12.8 -5.2015 | opp_overlap 1414533 1414531 1414529 1414534 TGCGGGATAACAGAG CTGGAGATGACA ATCT TGCCATCTCCAG TTTTTCTATTCTTCG TERM 1888 1414561 - 1414534 - T 100 -15 -2.50074 | opp_overlap 1414534, overlap 1414533 1414531 1414529 TGCGGGATAACAGAG CTGGAGATGACA ATCT TGCCATCTCCAG TTTTTCTATTCTTCG ydhS 1416177 - 1414567 - | putative oxidoreductase with NAD(P)/FAD-binding domai TERM 1889 1415592 - 1415612 + g 72 -6.1 -4.29845 | opp_overlap 1415592 GTGAGGTACCCATAA TTCCCACTT TAC AGGGGGGAA TTTTAGCTTCCATTA TERM 1890 1416324 - 1416305 - R 85 -9.2 -4.09739 | GGAAGGGGCTTAAAA CCGGGGGA ATAA TCCCCCTG AAAAAATGAAAAGTT ydhR 1416643 - 1416338 - | hypothetical protein TERM 1891 1416781 - 1416750 - R 71 -6.7 -4.23615 | gap 2, overlap 1416730 ACCAGATTGAATAAA TCTGGTGCGTCCGAG TGGA CTCGAAC-CACC-GA CCCCCACCATGTCAA TERM 1892 1417027 - 1417059 + r 95 -11.4 -3.85698 | gap 1, opp_overlap 1417033, overlap 1417028 1417033 ACATGCAAAATGTTG ACAG-AATAGCCGCC GTCA GGCGGCTATTGCTGG TTTATCGCGCAGCAC TERM 1893 1417028 - 1417058 + r 100 -14.9 -2.91276 | gap 1, opp_overlap 1417033, overlap 1417027 1417033 CATGCAAAATGTTGA CAG-AATAGCCGCC GTCA GGCGGCTATTGCTG GTTTATCGCGCAGCA TERM 1894 1417052 - 1417033 - R 100 -13.6 -3.51563 | opp_overlap 1417028 1417027 1417033 AAAATGTTGACAGAA TAGCCGCC GTCA GGCGGCTA TTGCTGGTTTATCGC TERM 1895 1417033 - 1417052 + r 100 -13.6 -3.35467 | opp_overlap 1417033, overlap 1417028 1417027 AAAATGTTGACAGAA TAGCCGCC GTCA GGCGGCTA TTGCTGGTTTATCGC mdtK 1418434 - 1417061 - | multidrug efflux system transporter TERM 1896 1418275 - 1418263 - G 79 -4.8 -4.95484 | CATGACCAAACAAAA TGGC GGGTA GCCA GATAGATGTACCAAT TERM 1897 1418494 - 1418477 - H 100 -9.1 -5.24989 | TGAGAGACTAAAAAA GCCGCCT CGAG AGGCAGC GAAAAGAAGAATCTG ribC 1418652 - 1419299 + | riboflavin synthase, alpha subunit TERM 1898 1419314 - 1419334 + T 81 -9.6 -3.90112 | overlap 1419315 AAAGCAATGATGGCT ACCCCCGC ATTTC GCGGGGGG TTTAGTTAGCGAGGA TERM 1899 1419315 - 1419333 + T 95 -13.1 -2.93853 | overlap 1419314 AAGCAATGATGGCTA CCCCCGC ATTTC GCGGGGG GTTTAGTTAGCGAGG cfa 1420488 - 1419340 - | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) TERM 1900 1420581 - 1420559 - R 86 -10.6 -3.85698 | overlap 1420560 TGGCTTTGTGAGAAA TCTCACGGAA AAA TTCCGTGAGC CTGGAATCCGACGTA TERM 1901 1420580 - 1420560 - R 100 -14.1 -2.91276 | overlap 1420559 GGCTTTGTGAGAAAT CTCACGGAA AAA TTCCGTGAG CCTGGAATCCGACGT ydhC 1421983 - 1420778 - | putative transporter; MFS superfamily TERM 1902 1423025 - 1422985 - g 76 -7.6 -4.19371 | gap 1, opp_overlap 1422986, overlap 1422987 GAAACGCTGAATAAA GA-GTGGTTGCGGGAGCCA GAAT CGGCTCCCACAAAGACATC TTAACGACGATAGTC TERM 1903 1423022 - 1422987 - g 77 -10.4 -3.68725 | opp_overlap 1422986, overlap 1422985 AACGCTGAATAAAGA GTGGTTGCGGGAGCCA GAAT CGGCTCCCACAAAGAC ATCTTAACGACGATA ydhB 1422097 - 1423029 + | putative DNA-binding transcriptional regulator; LysR-type purR 1424051 - 1423026 - | DNA-binding transcriptional repressor, hypoxanthine-binding TERM 1904 1424488 - 1424522 + H 81 -7.4 -4.68479 | CTCTTCTCCAATTGT TAGCAAATCTGCAAAA GTG TTTTGTAAATTTGTTA TTTTCATTATTTTGT ydhP 1424605 - 1425771 + | putative efflux protein; MFS family TERM 1905 1425785 - 1425807 + T 100 -13.5 -3.33737 | opp_overlap 1425785 GATAGCAAACAAAAA CGCAGAAGG GAAAG CCTTCTGCG TTATCACAATTACTC TERM 1906 1425807 - 1425785 - T 100 -13.5 -5.35815 | opp_overlap 1425785 GATAGCAAACAAAAA CGCAGAAGG GAAAG CCTTCTGCG TTATCACAATTACTC sodB 1426398 - 1425817 - | superoxide dismutase, Fe TERM 1907 1426528 - 1426507 - R 81 -11.7 -2.83894 | ATTATGACGAGTATA CGCACAATA GCCT TATTGTGCG TGAGGATAGGGTAAC TERM 1908 1426604 - 1426567 - R 70 -7.1 -3.88029 | opp_overlap 1426571 1426572, overlap 1426565 1426571 1426572 AGGTGAGACAAAAGA TGAACTTACCCTGTTGC GTTC ACAACAGGGTAAATTTT TAGCGGATGGTTTGT TERM 1909 1426571 - 1426600 + r 100 -9.4 -4.58663 | opp_overlap 1426567 1426565 1426571 1426572, overlap 1426572 GAGACAAAAGATGAA CTTACCCTGTTG CGTTCA CAACAGGGTAAA TTTTTAGCGGATGGT TERM 1910 1426600 - 1426571 - R 100 -12.3 -3.59432 | opp_overlap 1426571 1426572, overlap 1426567 1426565 1426572 GAGACAAAAGATGAA CTTACCCTGTTGC GTTC ACAACAGGGTAAA TTTTTAGCGGATGGT TERM 1911 1426599 - 1426572 - R 93 -13.6 -2.74575 | opp_overlap 1426571 1426572, overlap 1426571 1426567 1426565 AGACAAAAGATGAAC TTACCCTGTTGC GTTC ACAACAGGGTAA ATTTTTAGCGGATGG TERM 1912 1426572 - 1426599 + r 100 -12.9 -3.34716 | opp_overlap 1426572 1426571 1426567 1426565, overlap 1426571 AGACAAAAGATGAAC TTACCCTGTTG CGTTCA CAACAGGGTAA ATTTTTAGCGGATGG EFER_1389 1427443 - 1426604 - | conserved hypothetical protein; putative exported protein, putative NlpC/P60 family protein TERM 1913 1427811 - 1427792 - g 79 -2.1 -5.1925 | overlap 1427794 CCACAATCGAAAAAA TCCAGCG CCAGAT CACTGAA AACCCGATTCTCCTG TERM 1914 1427885 - 1427906 + G 72 -5.7 -4.56314 | overlap 1427901 CTCAGGCAGTGCAGG CGCTGTCCG CTTG CGGTGAGCG TTTTGCTTATGTTGA ydhD 1427770 - 1428114 + | monothiol glutaredoxin TERM 1915 1428170 - 1428194 + T 100 -12.3 -5.19251 | TGCCATCAGTCTCAG GGGAATCTTGT AAA ATAAGATTCCC TTTTTCTTAATCTTA lhr 1432829 - 1428207 - | putative ATP-dependent helicase lhr TERM 1916 1431026 - 1431043 + g 76 -7.7 -4.20516 | opp_overlap 1431003 1431026 GTGCAGGTGTCACAA TCACCTG GTCG CGGGTGA TTTGTTGGATACGCC TERM 1917 1432872 - 1432833 - R 70 -7.1 -3.85817 | opp_overlap 1432835 ATTTTCTGCCATAAA TGCTGTTCCCCCGGATG TCGACT CCTCTGGAGGAACAGTA TTGCACTTAAAACGT TERM 1918 1432835 - 1432870 + r 74 -9.7 -3.09492 | opp_overlap 1432833 TTTCTGCCATAAATG CTGTTCCCCCGGATG TCGACT CCTCTGGAGGAACAG TATTGCACTTAAAAC rnt 1433564 - 1432917 - | ribonuclease T (RNase T) TERM 1919 1433541 - 1433527 - G 75 -7.1 -4.39133 | opp_overlap 1433526 TAATAACCACGAAAA CGGTC ACACA GACCG GTAAGTTGAGCGTTA TERM 1920 1433661 - 1433634 - R 91 -12.1 -3.46647 | gap 1, overlap 1433632 CCGATGCAGTAAAGA TG-CGGGCGTGA TGAGT TCACGCCCGGCA GAAGATTAGTTGCCC gloA 1434074 - 1433667 - | glyoxalase I, Ni-dependent TERM 1921 1433796 - 1433809 + g 71 -2.3 -5.01732 | overlap 1433797 ACGGGTGACGTTACC GCCGT TCTG ACGGA TTTTTTCGCACGCTT TERM 1922 1434141 - 1434124 - R 72 -9.8 -2.78384 | opp_overlap 1434122 1434120 TGTTGTTTTAGTATA GCGGCG GCTTTG CGCCGC TCGCAATGTTGGATT nemA 1435252 - 1434155 - | N-ethylmaleimide reductase, FMN-linked TERM 1923 1434311 - 1434328 + g 73 -4.1 -4.8667 | ATCAATCAATCCTTT GCCGA TCAACGTT TCGGC TTTTTCTACCGTGTA TERM 1924 1435302 - 1435283 - R 80 -4.9 -5.24129 | overlap 1435284 TCTGGTGATAAAAAA TGCCTGC TAAACG GCAGGCG TCGCAATAATGGTTT TERM 1925 1435301 - 1435284 - R 73 -8.4 -3.73995 | overlap 1435283 CTGGTGATAAAAAAT GCCTGC TAAACG GCAGGC GTCGCAATAATGGTT ydhM 1435804 - 1435289 - | putative DNA-binding transcriptional regulator ydhF 1436279 - 1437175 + | putative oxidoreductase TERM 1926 1437529 - 1437502 - g 93 -11.2 -4.32903 | gap 1, opp_overlap 1437501 1437499 ACCAAAGATGGAAAA GCCAGCGCCGCGG AAT CCGCAG-GCGGGC ATCTTGATCCACAAA TERM 1927 1437740 - 1437730 - g 72 -8.2 -3.78329 | TCCGATCAACCTAAA CCGC TGG GCGG TGGCGGTGAACGCTA sodC 1437256 - 1437777 + | superoxide dismutase, Cu, Zn ydhK 1439787 - 1437778 - | conserved hypothetical protein; putative inner membrane protein TERM 1928 1438215 - 1438205 - G 70 -4 -4.71828 | overlap 1438208 AGCTGATCAACAAAA TTAC GGC GTAA CGCGCGAATATGGCG ydhJ 1440654 - 1439788 - | undecaprenyl pyrophosphate phosphatase ydhI 1440884 - 1440648 - | hypothetical protein slyA 1441082 - 1441522 + | DNA-binding transcriptional activator TERM 1929 1441556 - 1441538 - T 89 -11.7 -3.49886 | opp_overlap 1441538, overlap 1441534 ACTTCAGATAATTAA GGGGGCA GTAGT TGCCCCC TTTTGTCATTATTAG TERM 1930 1441538 - 1441556 + T 100 -12.4 -4.61747 | opp_overlap 1441538 1441534 ACTTCAGATAATTAA GGGGGCAG TAG TTGCCCCC TTTTGTCATTATTAG slyB 1442035 - 1441568 - | putative outer membrane lipoprotein TERM 1931 1442074 - 1442062 - H 70 -5.5 -4.46212 | overlap 1442063 CTGTTTACCATAAAA CGCCA CAC TGGCA TCCCTCTCAGTAAAG TERM 1932 1442576 - 1442563 - g 75 -4.5 -4.77165 | overlap 1442543 GCTGGCACAAGAAAA CCTAC AACC GCAGG ATATCGTGGCAATAG TERM 1933 1443354 - 1443398 + G 72 -4.8 -4.60487 | opp_overlap 1443356, overlap 1443366 GTCTGGCGGGCAATT TACCGTCGGTCACTGGCGCC AGTGA GGCGACAGTGCTTGGCGCAA TTTTTCCAGCTAATC anmK 1442309 - 1443433 + | anhydro-N-acetylmuramic acid kinase TERM 1934 1443664 - 1443679 + G 77 -6.8 -4.54047 | TAAAACTGAATAATC CTCGCC AGGT GGTGAG TTTTGTCTACGATAA ydhA 1443471 - 1443848 + | putative lipoprotein pdxH 1443906 - 1444562 + | pyridoxine 5'-phosphate oxidase TERM 1935 1445579 - 1445564 - g 79 -2.5 -5.21506 | overlap 1445574 AGAAGAAGACAAAAA CAGTG GCAAAG CACCG CGCGCTCAGTATGTG tyrS 1444689 - 1445963 + | tyrosyl-tRNA synthetase TERM 1936 1445973 - 1445998 + F 100 -10.5 -4.68209 | opp_overlap 1445976, overlap 1445976 AAGTAATACTTTGAA TTAGGGAGTGA GAAA TCACTCCCTTA TTTATTTGTTCAGGT TERM 1937 1445976 - 1445995 + F 100 -12.2 -4.43668 | opp_overlap 1445976, overlap 1445973 TAATACTTTGAATTA GGGAGTGA GAAA TCACTCCC TTATTTATTTGTTCA TERM 1938 1445995 - 1445976 - f 83 -12.2 -2.73468 | opp_overlap 1445976 1445973 TAATACTTTGAATTA GGGAGTGA GAAA TCACTCCC TTATTTATTTGTTCA TERM 1939 1446742 - 1446716 - g 74 -10.2 -3.53444 | TTACTCCTGGTGAAA CTGTTGCAAGGC GCG ACCCTACAACAG GCGCTGGAACATGTC pdxY 1446020 - 1446880 + | pyridoxal kinase 2/pyridoxine kinase TERM 1940 1446942 - 1446900 - T 85 -9.4 -4.18018 | gap 2, opp_overlap 1446899 1446900 1446902 TGTCGCTATTCAAAA CACTTATCCGG-TCTGA-GA GTGCA TCAACAGAACCGGATAAGTG ATTTATCTCGCCATC TERM 1941 1446900 - 1446942 + T 71 -9.4 -3.02202 | gap 2, opp_overlap 1446900, overlap 1446899 1446902 TGTCGCTATTCAAAA CACTTATCCGG-TCTGA-GA GTGCA TCAACAGAACCGGATAAGTG ATTTATCTCGCCATC gst 1447572 - 1446970 - | glutathionine S-transferase TERM 1942 1447654 - 1447632 - R 100 -13.5 -6.07627 | opp_overlap 1447653 ATGGGTAAAAAAAAA GCCGCTAAC GCAAA GTTAGCGGC TTAAAAAAGCGTTTC ydgR 1449184 - 1447679 - | putative oligopeptide transporter nth 1450420 - 1449785 - | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) rsxE 1451112 - 1450420 - | putative inner membrane NADH-quinone reductase rsxG 1451735 - 1451115 - | putative oxidoreductase rsxD 1452797 - 1451739 - | putative inner membrane oxidoreductase rsxC 1454978 - 1452798 - | putative 4Fe-4S ferredoxin-type protein fused with unknown protein TERM 1943 1452921 - 1452931 + g 70 -6.8 -4.01939 | TGCTGTGGTATTGCG CGGT TCA ACCG TTTCGTTATCACTTG TERM 1944 1454881 - 1454854 - G 100 -17.1 -4.77567 | AGGGGCATAACAAAA CGTTGCGCCAG CGGAAC CTGGCGCAACG GTGTGCCGTTAGACT rsxB 1455549 - 1454971 - | putative iron-sulfur protein rsxA 1456130 - 1455549 - | putative inner membrane subunit of an electron transport system EFER_1417 1456647 - 1456207 - | Conserved hypothetical protein, putative permease, putative exported membran protein ydgT 1456954 - 1456739 - | post-transcriptional regulator TERM 1945 1457089 - 1457071 - H 75 -2.4 -5.32944 | overlap 1457073 1457074 GCGATAATGAAAAAA TACTCGAC AAA ATCGAACA AAGAATATCCTGCAT ydgJ 1457588 - 1458628 + | putative oxidoreductase TERM 1946 1458663 - 1458640 - T 100 -13.9 -3.5489 | opp_overlap 1458636 1458644, overlap 1458636 ATAATCTTAAACGAA CAGACCGGC AACAAA GCCGGTCTG TAACATGTGGTTATT TERM 1947 1458679 - 1458706 + T 100 -8.4 -5.38047 | gap 1 TAACATGTGGTTATT GTCCTGC-AGCGA CTT TCGCACGCAGGGC TTTTTTCTCTGCATC add 1459780 - 1458674 - | adenosine deaminase TERM 1948 1458721 - 1458746 + g 72 -6.1 -4.42806 | overlap 1458720 CTTTTTTCTCTGCAT CGCTCAGGAAA GCGA TTTCCAGACCG TTTATTTGCGCCTGG TERM 1949 1459535 - 1459505 - G 74 -6 -4.57073 | overlap 1459507 CAGCTTGCTTAAAAA GCTCACCAGATCCG GTT CAGTGCTGGTGACC TGGACATGGGGGATA TERM 1950 1459781 - 1459742 - G 77 -5.8 -4.58685 | opp_overlap 1459744, overlap 1459743 1459746 AAATCTTCGGAAAAA TCTACGTTGCGCAATAAA TATA TCTATTGCGCAACACATT AATCACCGCAGTGAC TERM 1951 1459777 - 1459746 - G 82 -13.2 -2.83903 | opp_overlap 1459744, overlap 1459743 1459742 CTTCGGAAAAATCTA CGTTGCGCAATAAA TATA TCTATTGCGCAACA CATTAATCACCGCAG malY 1460956 - 1459784 - | C-S lyase; antagonist of MalT transcriptional activator of maltose regulon in E. coli TERM 1952 1460599 - 1460589 - G 78 -5.4 -4.83169 | ATCGCTTTATAAAAA GCAT CAT ATGC CGGGGTATGAATCAG EFER_1422 1461121 - 1460966 - | protein PTS enzyme II homolog; malI regulated (fragment) TERM 1953 1461190 - 1461212 + r 81 -12 -2.53346 | opp_overlap 1461190, overlap 1461189 1461187 1461183 GGGGATTCGATAGAA CGCCGGAG TGAAATT CTCCGGCG CTGTTACCTTTATGG TERM 1954 1461212 - 1461190 - R 91 -12 -3.50393 | opp_overlap 1461189 1461187 1461183 1461190 GGGGATTCGATAGAA CGCCGGAG TGAAATT CTCCGGCG CTGTTACCTTTATGG ydgA 1462799 - 1461222 - | hypothetical protein TERM 1955 1462703 - 1462715 + g 85 -3.3 -5.38348 | overlap 1462704 CTACAACAACGCCTG CCGCT ACC AGCGA TTTTTTCATATTTTT TERM 1956 1462768 - 1462747 - G 100 -13 -4.20136 | opp_overlap 1462744 1462742 1462747, overlap 1462761 ATCCGTAAAATGAAA CCAGGCGG AACATA CCGCCTGG TGGTGTTATAAGCCT TERM 1957 1462747 - 1462768 + g 81 -13 -2.80252 | opp_overlap 1462747 1462761, overlap 1462744 1462742 ATCCGTAAAATGAAA CCAGGCGG AACATA CCGCCTGG TGGTGTTATAAGCCT manA 1464061 - 1462826 - | mannose-6-phosphate isomerase TERM 1958 1465838 - 1465815 - g 72 -6.6 -4.21343 | TCCAACAGATACAAA TGTCGCAGTG TTCG CGCTGCGTCA AGTAATCGCCAGGTA fumA 1464197 - 1465843 + | fumarate hydratase (fumarase A), aerobic Class I TERM 1959 1465855 - 1465872 + F 100 -10.5 -5.3798 | opp_overlap 1465855 GTAATCGCCAGGTAA GCCGTCC TTCG GGGCGGC TTTTTATTGTTATTA TERM 1960 1467293 - 1467278 - g 77 -3.2 -5.07107 | overlap 1467290 GAAATTGCCAAAAAA GCCC ACAAAGAA GGGC TGACATTAAAAGCAG fumC 1465997 - 1467400 + | fumarate hydratase (fumarase C),aerobic Class II tus 1468326 - 1467397 - | inhibitor of replication at Ter, DNA-binding protein TERM 1961 1467648 - 1467671 + g 73 -11.8 -2.83715 | gap 1 GTTTAATTTTTAATT TCGCCTC-CTG GGG CAGAGAGGCGA TATCCTGATACTCGC TERM 1962 1468121 - 1468109 - G 82 -9.1 -4.18763 | AACAAATGGCGAAAA TGGCG CAA CGCCA AAGATTCAGCCTCTG rstB 1469764 - 1468478 - | sensory histidine kinase in two-component regulatory system with RstA rstA 1470538 - 1469777 - | DNA-binding response regulator in two-component regulatory system with RstB TERM 1963 1470087 - 1470077 - G 72 -6.8 -4.15366 | opp_overlap 1470075 1470072, overlap 1470073 ACTCAAAGAACCAAA GCAC AAC GTGC TATGCATTTTCAGCA ydgC 1470621 - 1470962 + | conserved hypothetical protein; putative inner membrane protein associated with alginate biosynthesis folM 1471681 - 1470959 - | dihydrofolate reductase isozyme ydgI 1473098 - 1471716 - | putative arginine/ornithine antiporter transporter TERM 1964 1472605 - 1472577 - G 74 -3.1 -4.93696 | gap 1, overlap 1472568 GCGAAACATTAAAAA TGCCAGCACGAT AAATAA ACCGAGC-GGCA GAAGTTTTGCCAGTG TERM 1965 1473247 - 1473263 + r 81 -10.8 -3.38162 | opp_overlap 1473240 1473247, overlap 1473242 ACTAAAAATGCGAAA GGCGGC ACAAA GCCGCC TTCAATTTATTACCT TERM 1966 1473263 - 1473247 - R 88 -10.8 -3.81062 | opp_overlap 1473247 1473242, overlap 1473240 ACTAAAAATGCGAAA GGCGGC ACAAA GCCGCC TTCAATTTATTACCT ydgH 1474230 - 1473286 - | hypothetical protein TERM 1967 1473320 - 1473355 + g 70 -10.6 -2.73123 | gap 1, overlap 1473310 1473309 CTGATTGTCATGTTG TTACCACGTTCCT-GCC ACT GGCGAGTAATGTGGTAA TACTTGGCACCTTTT TERM 1968 1474043 - 1474031 - G 82 -3.3 -5.2015 | opp_overlap 1474031 TCAACAACATAAAAA GAGGC TGC GCCTT CTTTGTCTGCACGGC TERM 1969 1474415 - 1474429 + H 70 -2.9 -4.92314 | opp_overlap 1474415 TTGCGTGGCAGAAAC TTATG ATCTA CATAA TTTTTATAAGTTAAT pntA 1474735 - 1476279 + | pyridine nucleotide transhydrogenase, alpha subunit TERM 1970 1476970 - 1476988 + G 81 -10.2 -3.97947 | CTCATACTCTGGTTG GGCTGCGG CAG CCGCAGGC TTTATGCTGAGTAAC pntB 1476290 - 1477678 + | pyridine nucleotide transhydrogenase, beta subunit TERM 1971 1477697 - 1477714 + F 100 -10.5 -5.44721 | opp_overlap 1477697 AACCTCAGTGCACAA CGGCCTC TTCG GGGGCCG TTTTTTTAAGCTCAT EFER_1436 1477835 - 1480003 + | Hypothetical protein; putative GGDEF diguanylate cyclase (GGDEF) domain, putative exported membrane protein ydgD 1480815 - 1479994 - | putative exported metallopeptidase TERM 1972 1481077 - 1481040 - R 100 -21.6 -3.65314 | opp_overlap 1481049 GTGAATGCTCAACAA TCGCTAATATGGCACG ACGAAG CGTGCCATATTAGCGA ATAAAAATTACGCTG TERM 1973 1481049 - 1481068 + r 71 -9.3 -3.03124 | opp_overlap 1481040 CAACAATCGCTAATA TGGCACG ACGAAG CGTGCCA TATTAGCGAATAAAA asr 1481396 - 1481085 - | Acid shock protein precursor, exported protein TERM 1974 1481912 - 1481879 - R 82 -6.9 -4.82901 | gap 1, opp_overlap 1481879 1481877 1481882 1481883 GGTTTTTTATAAAAA TAACCCCCGA-CTA TTTTAGT TAGGTCGGGGATTA TATTTACGCATGTAA ynfM 1483169 - 1481916 - | putative transporter; MFS type TERM 1975 1483103 - 1483113 + g 77 -3.2 -5.09895 | TTATATAGACATTCG GCTG GGA TAGC TTTTTTCCGTCAATA TERM 1976 1483473 - 1483451 - g 76 -7.6 -4.2461 | ACTGGCACGAACAAA CCGAAGTGTG GCG CTCACTGCGG CAGGAAGGCAGTTTT ynfL 1483290 - 1484189 + | putative DNA-binding transcriptional regulator EFER_1441 1484205 - 1484390 + | hypothetical protein TERM 1977 1484502 - 1484466 - gf 84 -6.5 -4.93296 | opp_overlap 1484478 CCAGTATTACAAAAA TCGTGCGCGAAATGCTC GAA GCGCATTTGGTGCAGGA GCTGGAGATCAAAGA TERM 1978 1484646 - 1484661 + GF 75 -9 -3.57462 | overlap 1484645 GTAGCAAATTGGTTG TCGAGG ATCG CCTCGA TTTGCCGCTACAGTC dgsA 1484318 - 1485538 + | DNA-binding transcriptional repressor ynfK 1485663 - 1486358 + | putative synthase (similar to dethiobiotin synthetase) clcB 1487609 - 1486311 - | putative Voltage-gated ClC-type chloride channel protein TERM 1979 1486426 - 1486402 - G 85 -10 -4.25056 | opp_overlap 1486399 1486402 CATGCCAGCAATAAA CCGGGGAGTA GTTGA TACTCTCCGG TCATTTCGCAAATCA TERM 1980 1486402 - 1486426 + g 78 -12.2 -2.91144 | opp_overlap 1486402, overlap 1486399 CATGCCAGCAATAAA CCGGGGAGTA GTTGA TACTCTCCGG TCATTTCGCAAATCA TERM 1981 1486529 - 1486517 - G 76 -7.7 -4.25658 | ATCCCAGCAAAATAA CCTGA GCA TCAGG GCCTTGCCCCAGTAC TERM 1982 1486609 - 1486598 - G 81 -7.2 -4.59773 | overlap 1486584 1486581 GGGTAGGCGTAAAAA CGCC ACCT GGCG CGCCGGAGCCACTAC TERM 1983 1486988 - 1486969 - G 75 -7.2 -4.32678 | gap 1, overlap 1486982 CCGTTAAATAAATAA GTGGTGAGC AAA GCT-ACCAC CGCAGAAATAATCAC TERM 1984 1487667 - 1487657 - R 74 -6.8 -4.30416 | opp_overlap 1487656 1487657 AGCATTAAGGCAAAA GCAC TAC GTGC GTATTTAGCCCGGTA EFER_1445 1488928 - 1487708 - | putative ABC transporter ATP/GTP-binding protein TERM 1985 1488797 - 1488811 + gr 75 -5.6 -4.66609 | ATTGTCGACAGCCTT CAGCGG CTG CCCCTG TTTTTGAATGAAGTG EFER_1446 1489500 - 1488850 - | putative ABC transporter membrane protein, membrane component TERM 1986 1489243 - 1489225 - GR 73 -7.3 -4.09822 | overlap 1489227 AAGTGAGTAGAGAAA CACGGCG GTAAT CGCCGGG AGAGCGCCGATACCC TERM 1987 1489241 - 1489227 - GR 73 -8.5 -3.6393 | overlap 1489225 GTGAGTAGAGAAACA CGGCG GTAAT CGCCG GGAGAGCGCCGATAC EFER_1447 1490412 - 1489510 - | putative ABC transporter periplasmic binding protein TERM 1988 1490080 - 1490094 + g 77 -2.8 -5.03314 | opp_overlap 1490077 1490076 TAACCAGACAAGGCC CTGG CGGGCAT CCAG TTTTTTAACCGTGGC TERM 1989 1490383 - 1490372 - G 79 -3.6 -5.14563 | CCGCTCAGCAAAAAA GCCG CAGC CAGC CATCCCAGCAGGTGT EFER_1448 1491171 - 1490437 - | putative ABC transporter membrane protein ydcY 1491480 - 1491713 + | hypothetical protein TERM 1990 1491747 - 1491720 - T 82 -8.4 -4.25283 | gap 1, overlap 1491723 ATCCTCTGATTAAAA TGAGCGTCTGGCC ACC AGCCAGGCGC-CA ACCACAAGTAAAATT TERM 1991 1491745 - 1491723 - T 79 -11.2 -3.13504 | overlap 1491720 CTCTGATTAAAATGA GCGTCTGGCC ACC AGCCAGGCGC CAACCACAAGTAAAA ydcZ 1492163 - 1491714 - | conserved hypothetical protein; putative inner membrane protein yncA 1492912 - 1492163 - | putative acyl-CoA N-acyltransferase yncB 1492859 - 1493896 + | putative conserved oxidoreductase, Zn-dependent and NAD(P)-binding TERM 1992 1493923 - 1493905 - fH 70 -9.5 -2.82279 | overlap 1493900 1493902 TGATTAAAGATACGA CGGCGGC ATAAA GCCGCCA TAAAAATCCAGGCAA yncC 1494095 - 1494760 + | putative DNA-binding transcriptional regulator TERM 1993 1494786 - 1494767 - T 100 -11.4 -4.06903 | AATCGTTAAATTAAA TGCCCGGC AAAT ACCGGGCA TCAAGATAATCACTC yncD 1496898 - 1494796 - | putative iron outer membrane receptor TERM 1994 1496227 - 1496242 + g 76 -4 -4.96848 | overlap 1496215 AATGCGAACGCCCAG TTTGGC ATTG GCTAAA TTTTTCTGTGCGCCA TERM 1995 1497321 - 1497298 - g 72 -4.4 -4.72497 | overlap 1497299 TAGCCAGCAAGAAAA CGCGCTGTGG CTCG CCACTTCGCA AAGCCGCAAACTGGA yncE 1497140 - 1498201 + | hypothetical protein TERM 1996 1498308 - 1498284 - T 95 -11.4 -3.78329 | opp_overlap 1498285 1498299, overlap 1498285 CGTCAGTAATCTAAA TTTGCCCGGC ACGTA GCCGGGCAAT TTTGCAATTAGCTCG TERM 1997 1498307 - 1498285 - T 100 -14.9 -2.86676 | opp_overlap 1498285 1498299, overlap 1498284 GTCAGTAATCTAAAT TTGCCCGGC ACGTA GCCGGGCAA TTTTGCAATTAGCTC TERM 1998 1498285 - 1498307 + T 100 -14.9 -4.19953 | opp_overlap 1498284 1498285, overlap 1498299 GTCAGTAATCTAAAT TTGCCCGGC ACGTA GCCGGGCAA TTTTGCAATTAGCTC ansP 1499815 - 1498316 - | L-asparagine transporter TERM 1999 1498743 - 1498732 - G 72 -5.8 -4.34263 | overlap 1498735 CGCCAACAACATAAA CGAC CAGC GTCG CCAGGATCCCGGCAT TERM 2000 1499582 - 1499537 - G 71 -3.1 -4.73677 | gap 1, overlap 1499538 GGCATAAGAAACAAA GCTGCCACTGGAAGGGC-GATG TAA CACCAGCTCACCCAATGCCCGC AGAATAAAAAACGAA yncG 1500097 - 1500714 + | putative enzyme with similarity with GST TERM 2001 1500752 - 1500721 - f 89 -10.2 -3.97709 | opp_overlap 1500718, overlap 1500703 ATTATTTAACAACAA TGCCGGAGATTAAT GTTA ATAAATCACCGGCA AAGTTAACTGGACGT TERM 2002 1500992 - 1500973 - f 71 -9.4 -3.05521 | opp_overlap 1500971, overlap 1500976 ATGATATTTCTAAGA GAATCGTA ATGG TACGATTC AGATTCTCACAAATG EFER_1458 1501052 - 1501252 + | hypothetical protein EFER_1459 1501274 - 1501606 + | hypothetical protein EFER_1460 1501651 - 1501971 + | hypothetical protein TERM 2003 1502326 - 1502308 - g 70 -4.6 -4.55697 | ATTGTGAGAAATAAA GGTAAAAA AAC TTATTACC GAGAATCATTGATTG EFER_1461 1502107 - 1502496 + | hypothetical protein TERM 2004 1503070 - 1503035 - f 86 -7.6 -4.68424 | gap 1, opp_overlap 1503043 1503047 1503051 1503060, overlap 1503037 1503057 1503060 CAATTGATGGAAAAA CGCTCCGGC-ACTCTTA TGA CAAGAGTCGCCGCAGGG GAGCGATTCATGTCA EFER_1463 1503949 - 1504305 + | hypothetical protein TERM 2005 1504886 - 1504914 + G 100 -4 -6.20267 | gap 1, opp_overlap 1504886 TGAATAACTCAGAGA GGCTATCTGTTAA GGAG TTAA-AGACAGCC TTTTTTTATTTTTGC EFER_1464 1504606 - 1505088 + | hypothetical protein EFER_1465 1505194 - 1505535 + | hypothetical protein TERM 2006 1506184 - 1506164 - f 87 -6.2 -5.15526 | ATATAAAAGGAAAAA TCATCACA ACTGA TGCGATGA GTTGCCAGAGAGATA TERM 2007 1507138 - 1507157 + G 74 -2.2 -5.0538 | opp_overlap 1507138, overlap 1507132 1507129 TAACGGTAAGAACGA TCAATG TTCTTATT CATTGA TTTTTTGCAATACAA EFER_1468 1506866 - 1507450 + | hypothetical protein yddH 1508180 - 1507611 - | hypothetical protein TERM 2008 1508307 - 1508297 - H 75 -8.2 -3.89814 | opp_overlap 1508296 CGATCACACAAAATA GCCG GTG CGGC GTCTATTCCAGGTTA nhoA 1508484 - 1509200 + | N-hydroxyarylamine O-acetyltransferase TERM 2009 1509213 - 1509244 + T 83 -12.2 -2.57092 | opp_overlap 1509200 1509231, overlap 1509223 1509239 TAGTTTGCGCCACGG GGCCGGATGCGGCG TAAA CGCCTTATCAGGCC TACATTAGTCCGGTT TERM 2010 1509275 - 1509231 - T 100 -13.9 -3.53811 | gap 1, opp_overlap 1509223 1509213 1509239 CGGATGCGGCGTAAA CGCCTTATCAGGCCTACA TTAGTCCGGT TGTAGGCCTGATAAG-CG AAGCGCATCAGGTAA yddE 1510189 - 1509296 - | hypothetical protein EFER_1473 1511717 - 1510509 - | putative mandelate racemase EFER_1474 1511964 - 1513007 + | putative lacI family transcriptional regulator TERM 2011 1513036 - 1513017 - g 71 -2.8 -4.83246 | gap 1, opp_overlap 1513018 1513032, overlap 1513018 GCATAAACAAACAAA TGC-CAGTC GCA GACTGTGCT AGCTTTGCTAATACT ydcE 1513016 - 1513297 + | 4-oxalocrotonate tautomerase TERM 2012 1513333 - 1513302 - T 71 -4.6 -4.63928 | gap 2, overlap 1513306 ACAGTATGTGAAAAA TTAGCCAGCGGTGA CTCGCT TC-CCGCTGG-TAA CAAACGTGCCAGCAC yddH 1513871 - 1513302 - | hypothetical protein nhoA 1514046 - 1514891 + | N-hydroxyarylamine O-acetyltransferase TERM 2013 1514948 - 1514976 + T 76 -6.7 -4.54727 | opp_overlap 1514949 1514950 1514969, overlap 1514949 1514950 TTACAGAGAGACTAA AGGCCTGATTAGC GTA GTTAATCAGGCAA TTTTCGTTTGCCCGA TERM 2014 1514949 - 1514975 + T 78 -10.2 -3.32354 | opp_overlap 1514949 1514950 1514969, overlap 1514948 1514950 TACAGAGAGACTAAA GGCCTGATTAGC GTA GTTAATCAGGCA ATTTTCGTTTGCCCG TERM 2015 1514975 - 1514949 - T 74 -8 -3.92267 | opp_overlap 1514949 1514948 1514950, overlap 1514950 1514969 TACAGAGAGACTAAA GGCCTGATTAGC GTA GTTAATCAGGCA ATTTTCGTTTGCCCG TERM 2016 1514974 - 1514950 - T 83 -11.5 -2.94637 | opp_overlap 1514950 1514949 1514948, overlap 1514949 1514969 ACAGAGAGACTAAAG GCCTGATTAGC GTA GTTAATCAGGC AATTTTCGTTTGCCC TERM 2017 1514950 - 1514974 + T 93 -13.7 -2.5893 | opp_overlap 1514949 1514950 1514969, overlap 1514949 1514948 ACAGAGAGACTAAAG GCCTGATTAGC GTA GTTAATCAGGC AATTTTCGTTTGCCC EFER_1478 1515831 - 1515028 - | putative transcriptional regulator protein TERM 2018 1515300 - 1515324 + g 79 -10.1 -3.7282 | overlap 1515305 TATAGCGAATCATGT TTATACGTGAC AAC GTCACGTTTAA TTGTTCATCAGGTAG TERM 2019 1515305 - 1515319 + g 83 -10 -4.09805 | overlap 1515300 CGAATCATGTTTATA CGTGAC AAC GTCACG TTTAATTGTTCATCA catB 1516005 - 1517207 + | Muconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE) catC 1517197 - 1517487 + | Muconolactone delta-isomerase TERM 2020 1517504 - 1517521 + F 86 -11.3 -3.40522 | TAATATCTTACCTCA TGCCGGA TAAC TCCGGCA TTATCCTGGAACAAT catA 1517552 - 1518478 + | Catechol 1,2-dioxygenase (1,2-CTD) TERM 2021 1518489 - 1518516 + F 77 -8.5 -3.92673 | overlap 1518489 1518490 AATAAATTCTCCTTT CGCGGTATTAC GTTGAG GTAATACCGCC GTTTTTATTTTATAT TERM 2022 1518489 - 1518517 + F 100 -8.3 -5.58522 | gap 1, overlap 1518489 1518490 AATAAATTCTCCTTT C-GCGGTATTAC GTTGAG GTAATACCGCCG TTTTTATTTTATATC TERM 2023 1518490 - 1518515 + F 86 -12 -2.93164 | overlap 1518489 1518489 ATAAATTCTCCTTTC GCGGTATTAC GTTGAG GTAATACCGC CGTTTTTATTTTATA benA 1518558 - 1519940 + | Benzoate 1,2-dioxygenase alpha subunit benB 1519940 - 1520425 + | benzoate 1,2-dioxygenase beta subunit benC 1520432 - 1521451 + | benzoate 1,2-dioxygenase ferredoxin reductase subunit benD 1521461 - 1522234 + | cis-diol dehydrogenase TERM 2024 1522283 - 1522299 + F 74 -10.1 -3.07962 | TTGCTTCAACTTCTT TGCCCGT CAG GCGGGCA TATTGACCTGTGAGA EFER_1486 1522487 - 1522630 + | hypothetical protein EFER_1487 1523854 - 1522739 - | putative outer membrane porin protein precursor TERM 2025 1523154 - 1523166 + g 73 -3.5 -4.83593 | GCTTTACCGGAGGCG TTAAT AGA ATTAA TTTTTGCTAATTCTT TERM 2026 1523816 - 1523847 + g 70 -4.6 -4.5464 | GGCGCCTGCTGCTAA CAAAGTTGATATCA CCAC TGCTATTAATTTTG TTTTCATTGTATATA TERM 2027 1524158 - 1524189 + r 78 -5.2 -5.06414 | gap 1, opp_overlap 1524163 1524180, overlap 1524163 ATATGCATATGAAGA TG-AAAGCCGCTTAC AGT GTAAACGGCTTTGCC TTTTTATTGACGACG TERM 2028 1524163 - 1524183 + r 86 -9.7 -4.05495 | opp_overlap 1524163 1524180, overlap 1524158 CATATGAAGATGAAA GCCGCTTAC AGT GTAAACGGC TTTGCCTTTTTATTG TERM 2029 1524183 - 1524163 - R 100 -11.9 -3.96093 | opp_overlap 1524158 1524163, overlap 1524180 CATATGAAGATGAAA GCCGCTTAC AGT GTAAACGGC TTTGCCTTTTTATTG yddG 1525017 - 1524193 - | metabolite and drug efflux pump TERM 2030 1526080 - 1526052 - g 90 -7.6 -4.75174 | gap 1 GATGGAAGCGAAAAA CAACAACGATGCA ACCT TG-ATCGTTGTCG ATCCCCGTTTTACGC TERM 2031 1526864 - 1526836 - g 76 -9 -3.73775 | gap 1 GTTAGCCTGATGAAA TCTTTCTACGGCG ATGC CGC-GCAGAAAGA GAACAACTGGGGCTA fdnG 1525306 - 1528353 + | formate dehydrogenase-N, alpha subunit, nitrate-inducible TERM 2032 1529152 - 1529140 - g 71 -9.1 -3.5394 | opp_overlap 1529139 1529142, overlap 1529129 AAAGGCGCGTTGAAA CCGCT GGC AGCGG CTGGCTTTATCGCCA fdnH 1528366 - 1529250 + | formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible fdnI 1529243 - 1529896 + | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible TERM 2033 1529922 - 1529941 + T 100 -9.3 -5.8187 | opp_overlap 1529922 ACTTTAAGCTGAAAA TGGCGCT GTAAAA AGCGCCA TTTTTTTATTGCGTA TERM 2034 1529941 - 1529922 - T 85 -9.3 -4.19506 | opp_overlap 1529922 ACTTTAAGCTGAAAA TGGCGCT GTAAAA AGCGCCA TTTTTTTATTGCGTA EFER_1494 1530509 - 1530231 - | conserved hypothetical protein, putative plasmid maintenance system killer protein adhP 1531705 - 1530695 - | alcohol dehydrogenase, 1-propanol preferring TERM 2035 1531472 - 1531454 - G 77 -8.8 -4.08216 | opp_overlap 1531454 1531464 1531466, overlap 1531455 1531457 GCATCCTTCGTAAAA CCACGCCA CGC TGGCGCGA TCGCCTGGTTTTAAT TERM 2036 1531832 - 1531809 - R 86 -12.4 -2.51609 | overlap 1531808 1531807 AAGAGGAGGAAAATT GCCCGGTAGC ATTC ACCACCGGGC TGAGACTTAAATGGA sfcA 1533536 - 1531839 - | malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) TERM 2037 1532753 - 1532781 + g 79 -4.6 -4.96848 | gap 1, overlap 1532754 AAGAACAAATTTCAT TGCGATAGCGGTT AAGC AACGGC-ATCGCG TTTTTCTGTGCGAAA TERM 2038 1533660 - 1533639 - g 100 -13.1 -5.71295 | opp_overlap 1533639 AGACAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA TERM 2039 1533639 - 1533660 + G 100 -13.1 -3.82031 | opp_overlap 1533639 AGACAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA EFER_1497 1533586 - 1533675 + | hypothetical protein bdm 1534147 - 1533932 - | biofilm-dependent modulation protein TERM 2040 1534797 - 1534782 - g 75 -6.8 -4.30576 | TTGCGATTACTAAAA TCGCCC TGAA GAGCGA AGTTGCCGTGCCGGG osmC 1534490 - 1534921 + | osmotically inducible, stress-inducible membrane protein TERM 2041 1534953 - 1534923 - T 75 -9.1 -3.71917 | gap 1, opp_overlap 1534925, overlap 1534924 AGTTGAAATCGTAAA GCGTTGCCGGATGA TTCA TCATCCGGCAA-GT ATTAACCCAGATACC TERM 2042 1534952 - 1534924 - T 89 -12.6 -2.82668 | gap 1, opp_overlap 1534925, overlap 1534923 GTTGAAATCGTAAAG CGTTGCCGGATGA TTCA TCATCCGGCAA-G TATTAACCCAGATAC TERM 2043 1534925 - 1534952 + T 95 -12.8 -3.02144 | opp_overlap 1534924 1534923 TTGAAATCGTAAAGC GTTGCCGGATGA TTCA TCATCCGGCAAG TATTAACCCAGATAC TERM 2044 1535153 - 1535131 - T 72 -6.2 -4.38927 | opp_overlap 1535134, overlap 1535134 TCTTTAGACAAGAAA GCAGGGCG CAGGCGT CGCCCTTC TTTTACAACGGCATA ydcI 1536079 - 1535156 - | putative DNA-binding transcriptional regulator TERM 2045 1536259 - 1536229 - R 75 -8.4 -3.83668 | opp_overlap 1536233 1536236, overlap 1536230 TAAGAGAGAAGAGAA TGGTTGAATTCG GGTTGAA CGAATTCAACCC GATAATGATTTACAC TERM 2046 1536258 - 1536230 - R 83 -11.9 -2.89116 | opp_overlap 1536233 1536236, overlap 1536229 AAGAGAGAAGAGAAT GGTTGAATTCG GGTTGAA CGAATTCAACC CGATAATGATTTACA pcaG 1536889 - 1536269 - | Protocatechuate 3,4-dioxygenase alpha chain pcaH 1537644 - 1536886 - | Protocatechuate 3,4-dioxygenase beta chain TERM 2047 1538213 - 1538230 + G 70 -9.9 -3.16965 | overlap 1538212 ATGATGCATCGTTGT CGCGAAA TCCT TTTCGCG TATTCACTTCACTTT TERM 2048 1538322 - 1538337 + G 72 -10.4 -3.41134 | GCGCGATATTTTTAC CTCCCG ATGC CGGGAG TTACTTGATAAATAT TERM 2049 1539030 - 1539040 + G 70 -6.8 -4.14243 | TTTTTTACCCGTCAG TGCC GCG GGCA TTTTCCAGTCAAATC ydcJ 1537855 - 1539198 + | hypothetical protein mdoD 1539516 - 1541141 + | glucan biosynthesis protein, periplasmic TERM 2050 1541176 - 1541153 - f 100 -15.4 -3.1319 | TTAAAATTTACCCAA CGGCTTTTCC CAAC GGAAAAGCCG TTAAAGCCTGCTGAT TERM 2051 1541463 - 1541449 - g 77 -2.8 -5.05606 | CTTAAGAAAAAGAAA CTCC AGTTGAA GGAG GAACTGCTGCGGATC ydcH 1541284 - 1541520 + | hypothetical protein TERM 2052 1541534 - 1541550 + F 100 -11.5 -5.03715 | AACTTTCTTTTCTGA GCCGCCG AAC TGGCGGC TTTTTTGACGCTAAT rimL 1541574 - 1542122 + | Ribosomal-protein-serine acetyltransferase (Acetylating enzyme for N-terminal of ribosomal protein L7/L12) ydcK 1543094 - 1542114 - | Putative bacterial transferase hexapeptide LpxA like enzyme TERM 2053 1543502 - 1543492 - g 71 -3.2 -4.82901 | TGCCTGGGATAAAAA TGCC ATG AGCA TCGCTAACGTCGAGC tehB 1543310 - 1543906 + | putative AdoMet-dependent methyltransferase ydcL 1544049 - 1544717 + | conserved hypothetical protein; putative exported protein TERM 2054 1544750 - 1544719 - f 88 -9.4 -4.35327 | opp_overlap 1544716 1544724, overlap 1544720 1544724 TGAGCAAAAAGTAAA CGTAATGCGCCATC TTAG GGTGGCGCATTTCA CTGTTTATCTTCTTC TERM 2055 1544749 - 1544720 - f 79 -10.7 -3.20111 | opp_overlap 1544716 1544724, overlap 1544719 1544724 GAGCAAAAAGTAAAC GTAATGCGCCATC TTAG GGTGGCGCATTTC ACTGTTTATCTTCTT TERM 2056 1544724 - 1544745 + F 100 -12.3 -3.83927 | opp_overlap 1544720 1544719 1544724, overlap 1544716 AAAAAGTAAACGTAA TGCGCCATC TTAG GGTGGCGCA TTTCACTGTTTATCT TERM 2057 1544745 - 1544724 - f 76 -10.1 -3.38096 | opp_overlap 1544724 1544716, overlap 1544720 1544719 AAAAAGTAAACGTAA TGCGCCATC TTAG GGTGGCGCA TTTCACTGTTTATCT ydcP 1544844 - 1546805 + | putative peptidase TERM 2058 1546852 - 1546877 + F 89 -3.9 -5.64304 | TAAGTAGTCAAAAAG GGTCGCCAATT AATA AGCTGGTGGCC TTTTTTATTATCTTA TERM 2059 1547731 - 1547745 + G 72 -10 -3.29096 | opp_overlap 1547730 1547729 GCTATAAAATTAATG CCACTG TTA CAGTGG TTGATGGTTCGTCGC EFER_1511 1547421 - 1547942 + | Hypothetical protein, putative transcriptional regulatory protein yncJ 1548266 - 1548036 - | hypothetical protein TERM 2060 1548643 - 1548630 - g 74 -2.3 -5.12068 | CACAGGCAATAAAAA TGCCG AAAG CGCCA GTCATTCCAGTCACT TERM 2061 1549310 - 1549322 + G 86 -9.1 -4.31688 | opp_overlap 1549302 1549301 GCGAAAGCGTGGGAT CGCCA CGA TGGCG TTTTGCATTGCTCTT TERM 2062 1549444 - 1549470 + G 72 -5.8 -4.40561 | overlap 1549446 TACGCTTTCGACCAG TTCACCGATGCA GCT TGCGCTGGTGGA TTATTTTTCCACGCG ydcR 1548413 - 1549819 + | putative DNA-binding transcriptional regulator fused with a domain with PLP-binding motif ydcS 1550064 - 1551209 + | putative spermidine/putrescine transporter subunit ; periplasmic-binding component of ABC superfamily transporter TERM 2063 1551928 - 1551944 + G 70 -4.3 -4.57569 | GTTTGTTGCGGGATT CGTCGGG ACA TCCAACG TTTTTGAGCCGCTAA ydcT 1551227 - 1552240 + | putative spermidine/putrescine transporter subunit ; ATP-binding component of ABC superfamily tranporter TERM 2064 1552544 - 1552554 + G 70 -6.8 -4.14243 | GTCACTATCGCTAGC GCCA TTC TGGC TTTTCCGATGGCGTG ydcU 1552241 - 1553182 + | putative spermidine/putrescine transporter subunit ; permease of ABC superfamily transporter TERM 2065 1553583 - 1553596 + G 70 -3.8 -4.68994 | TTTTTCACCATCGTG GTCG GTCATG CGAC TTTTTGCGTAGTGGT ydcV 1553172 - 1553966 + | putative spermidine/putrescine transporter subunit; permease component of ABC superfamily TERM 2066 1554624 - 1554604 - g 72 -6.7 -4.2349 | TTGGCAGAGGCAAAA CGGTGGGCG ATC CGCTGACCG GACATCCCAAAGTGC ydcW 1553988 - 1555412 + | medium chain aldehyde dehydrogenase TERM 2067 1555485 - 1555448 - f 95 -11.5 -3.74251 | opp_overlap 1555450 1555452 GAGATGTGGATCAAA CACACTGTCAGAG GTGGGAAATAGT CTCTGACAGTGTG TGCTGCAAAAAAGTT TERM 2068 1555450 - 1555483 + F 72 -9.7 -2.78384 | opp_overlap 1555448, overlap 1555452 GATGTGGATCAAACA CACTGTCAGAGGT GGGAAATA GTCTCTGACAGTG TGTGCTGCAAAAAAG ydcX 1555834 - 1556016 + | conserved hypothetical protein, putative transmembrane protein ynfD 1556369 - 1556064 - | conserved hypothetical protein; putative exported protein TERM 2069 1556674 - 1556660 - g 75 -5.6 -4.70879 | opp_overlap 1556659 1556660 GGTAAAGTCGAAAAA CGTGTC AGT GGCACG CTTTCTGAAGAGGGC TERM 2070 1557054 - 1557030 - g 72 -7.1 -4.16284 | ACACCGCCCAACAAA CCTTCAATGGC AAA GCCATCGGAAG CTCAAAACAATACTG ynfC 1556474 - 1557184 + | conserved hypothetical protein; putative exported protein speG 1557749 - 1557189 - | spermidine N1-acetyltransferase ynfB 1558121 - 1557780 - | conserved hypothetical protein; putative exported protein TERM 2071 1558449 - 1558461 + G 74 -10.5 -3.17444 | overlap 1558447 1558445 1558443 1558441 GCGGTCGTGTCTATG CCGCC TAC GGCGG TGTGTATGTTTGTAC ynfA 1558268 - 1558594 + | conserved hypothetical protein; putative inner membrane protein TERM 2072 1558584 - 1558599 + F 91 -7.5 -5.35459 | TTGTTGCGGGATGGG GGCGC GCTTAA GCGCC TTTTTTGTGATCTAT rspA 1558703 - 1559917 + | putative enolase/dehydratase rspB 1559905 - 1560948 + | putative dehydrogenase, starvation-sensing protein with NAD(P)-binding and GroES domains TERM 2073 1561207 - 1561182 - g 75 -4.9 -4.87291 | gap 1 CAGTTGAAGTAAAAA TTTATCCTAACG AAT CATTAGG-TAAA GAGATGGATATTATC EFER_1527 1560992 - 1561966 + | putative TRAP dicarboxylate transporter precursor, DctP subunit TERM 2074 1561975 - 1561992 + F 100 -9.1 -5.0538 | opp_overlap 1561974 1561967 1561975, overlap 1561975 AAAATAACATTAAAC GGGGGAG TCGC TTCCCCC TTTTTTGAGCTACAG TERM 2075 1561975 - 1561991 + F 80 -10.1 -3.62746 | opp_overlap 1561974 1561967 1561975, overlap 1561975 AAAATAACATTAAAC GGGGGAG TCG CTTCCCC CTTTTTTGAGCTACA TERM 2076 1562067 - 1562087 + G 71 -11.2 -2.86582 | opp_overlap 1562064, overlap 1562065 TCTATTTAATTATTG GCGCAGTT TTGTT AACTGCGC TCATTGGTGTTGTAT EFER_1528 1561997 - 1562494 + | Putative TRAP dicarboxylate transporter, DctQ subunit, putative transmembrane protein TERM 2077 1563262 - 1563274 + G 78 -5.5 -4.84527 | TGCAGTGGTTTTCGC GCTGA TCG TCGGC TTTTTCGTCTATGGC EFER_1529 1562519 - 1563802 + | Putative TRAP dicarboxylate transporter, DctM subunit precursor, putative transmembrane protein TERM 2078 1564027 - 1564015 - g 77 -3.3 -5.07107 | overlap 1564025 CAAAGTTTCAAAAAA GGCGT TGA AAGCC GTACCAATGGCGAAG TERM 2079 1564145 - 1564167 + G 84 -10.6 -3.72051 | overlap 1564137 1564146 1564148 TGGTTGACGGTGCTC GTCTGGCACA GTT TGTGCCAGAG TTTGCCATTATTCCC TERM 2080 1564146 - 1564166 + G 85 -14.1 -2.82749 | overlap 1564137 1564145 1564148 GGTTGACGGTGCTCG TCTGGCACA GTT TGTGCCAGA GTTTGCCATTATTCC TERM 2081 1564487 - 1564510 + G 77 -8.8 -4.05714 | gap 1 CCGGGGTCGTGGATG CCGCTG-AGGC TCA GCCGACAGCGG TTTATGGTTCAAAGT TERM 2082 1564743 - 1564757 + G 74 -8.6 -3.96298 | GATGACGATTTCCGA GGTTGA TAC TCAACC TTTCATTGATGGATG dctP 1563862 - 1564839 + | TRAP dicarboxylate transporter, DctP subunit precursor TERM 2083 1564849 - 1564866 + F 70 -7.7 -3.62054 | opp_overlap 1564844 1564849, overlap 1564846 AATTAAATAATATAA GCAGAGT TTCG GCTCTGC TTCATTGTTTGGGGT EFER_1531 1564888 - 1565364 + | putative C4-dicarboxylate transporter, small permease protein, putative Tripartite ATP-independent transporter, DctQ component EFER_1532 1565277 - 1566635 + | putative C4-dicarboxylate transporter, large permease protein, putative TRAP dicarboxylate transporter, DctM subunit ydfI 1566699 - 1568186 + | putative mannonate dehydrogenase ydfZ 1568628 - 1568275 - | hypothetical protein TERM 2084 1568738 - 1568767 + r 93 -12.3 -3.02263 | opp_overlap 1568740, overlap 1568740 TATAAAATTTTGTAA CATGCCGGATA ATCACCTG TATCCGGCATG TATTCAGGAGGATAT ydfH 1569468 - 1568782 - | putative DNA-binding transcriptional regulator TERM 2085 1569484 - 1569509 + r 78 -4.1 -5.15969 | gap 1 TGTTCTGGCTTTTCA GTGAGTAAACCT TAC AAGTTTAC-CAC TTTTTTGCCTTAAGC TERM 2086 1569547 - 1569530 - R 78 -9.8 -3.41878 | TGCCTTAAGCTATAA CCCGGC GATTAA GCCGGG TATAAAATTACTGGC ydfG 1570301 - 1569555 - | L-allo-threonine dehydrogenase, NAD(P)-binding TERM 2087 1570836 - 1570861 + G 77 -6.9 -4.46212 | gap 1 GATGCCGAGTCACTA CGCTTGTTGGAT GTG ATCCACCA-GCG TTTTGTGCTCGCAGG dcp 1570398 - 1572479 + | dipeptidyl carboxypeptidase II TERM 2088 1572488 - 1572508 + T 91 -6.8 -5.56568 | opp_overlap 1572480 1572488 GAGTTAAGACAAGTA CGGGCC TGACATTAC GGCCCG TTTTTTTCATCCTGT ydeJ 1573056 - 1572523 - | conserved hypothetical protein, Putative Competence-damaged protein ydeI 1573211 - 1573603 + | hypothetical protein TERM 2089 1574437 - 1574416 - g 95 -14.5 -3.25015 | opp_overlap 1574416 CGTAATTATGATCAA GGCGTCTAC AGAT GTAGACGCC TGTATGGCGGGGCTG TERM 2090 1574416 - 1574437 + G 90 -14.5 -2.87344 | opp_overlap 1574416 CGTAATTATGATCAA GGCGTCTAC AGAT GTAGACGCC TGTATGGCGGGGCTG ydeH 1573742 - 1574707 + | conserved hypothetical protein, putative diguanylate cyclase (GGDEF) TERM 2091 1574856 - 1574874 + T 100 -11.7 -6.06529 | CCATGCAAGCATTTT CCGCTGG TCACT CCAGCGG TTTTTTTTATCTCTC ydeE 1576106 - 1574919 - | putative transporter TERM 2092 1576568 - 1576588 + G 100 -5.3 -5.6473 | TGCCGGACTGGCGTC GCTGGTGCT CCA GGCGCAAGC TTTTTTTACTATTGT eamA 1576299 - 1577192 + | cysteine and O-acetyl-L-serine efflux system TERM 2093 1577234 - 1577271 + T 79 -11.2 -3.09933 | GCAAGTATGCATTAT TCAGGCCGGAAGCGGC ATGAAA GCCTAATCCGGCCTGA TTCAATAGATTGCAA TERM 2094 1577303 - 1577325 + T 75 -9.1 -3.66732 | overlap 1577306 AGTGACACTGTGTTT CAAGCCCCT TTGAC AGGGGCTGG TTATTACAGTCGTTG TERM 2095 1577306 - 1577322 + T 71 -9.4 -2.94045 | overlap 1577303 GACACTGTGTTTCAA GCCCCT TTGAC AGGGGC TGGTTATTACAGTCG marB 1577547 - 1577329 - | Multiple antibiotic resistance protein, putative exported protein marA 1577986 - 1577555 - | DNA-binding transcriptional dual activator of multiple antibiotic resistance marR 1578393 - 1577959 - | DNA-binding transcriptional repressor of multiple antibiotic resistance TERM 2096 1578276 - 1578236 - GH 70 -7.6 -3.65991 | opp_overlap 1578251 1578268 ACCGGGGTAATACAA GCTGCGC-ACCGAATAGAGC AGA GCACT-TTCAGTTGCGCGGC AGTGATATCTAAAGG marC 1578613 - 1579278 + | putative wide-spectrum exporter TERM 2097 1579308 - 1579282 - T 100 -13.9 -3.75292 | opp_overlap 1579286, overlap 1579286 ACGTATCATTAAGAA TAAAGCCGGAT GCACG ATCCGGCTTTA TAACTCAGTGTTGTG TERM 2098 1579304 - 1579286 - T 100 -10.3 -4.49316 | opp_overlap 1579286, overlap 1579282 ATCATTAAGAATAAA GCCGGAT GCACG ATCCGGC TTTATAACTCAGTGT TERM 2099 1579286 - 1579304 + T 89 -10.3 -3.93136 | opp_overlap 1579286 1579282 ATCATTAAGAATAAA GCCGGAT GCACG ATCCGGC TTTATAACTCAGTGT ydeA 1580506 - 1579313 - | wide-spectrum sugar (arabinose, isopropyl-beta-D-galactoside) exporter; MFS superfamily yneJ 1581464 - 1580598 - | putative DNA-binding transcriptional regulator TERM 2100 1581604 - 1581588 - g 79 -10.1 -3.76492 | GGCAATTTCAGTAAA TCCGGCC AAT GGCCAGA AAATCGCAACCATGC yneI 1581562 - 1582938 + | putative aldehyde dehydrogenase TERM 2101 1583620 - 1583636 + G 85 -3 -5.35224 | gap 1, overlap 1583575 CTGAAAATGAGTTGT GTG-GAG CTTG CTCGCAC TTTTGTTTTTCTGGC yneH 1583014 - 1583940 + | putative glutaminase yneG 1583940 - 1584296 + | hypothetical protein yneF 1584406 - 1585839 + | putative membrane-associated diguanylate cyclase (GGDEF domain) uxaB 1585988 - 1587439 + | altronate oxidoreductase, NAD-dependent TERM 2102 1587449 - 1587464 + F 100 -10.4 -5.03314 | TGCTAATACTCTGAA CCCGGT TTCG ACCGGG TTTTTTACCGATCCG yneE 1587635 - 1588549 + | conserved hypothetical protein; putative inner membrane protein tam 1589311 - 1588553 - | trans-aconitate methyltransferase TERM 2103 1589399 - 1589416 + r 73 -9.9 -2.94888 | overlap 1589397 1589412 AGGATCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT ydcM 1590608 - 1589400 - | putative transposase TERM 2104 1589975 - 1589988 + g 73 -3.8 -4.83615 | overlap 1589962 1589960 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG TERM 2105 1590262 - 1590295 + g 78 -8.9 -4.18018 | gap 1, overlap 1590263 TCGAGCTTAACGCCC TGCGGGTAGCGGAATG CAT CATTCTG-TCCCCGCG TTTTGAATCGGGGAA TERM 2106 1590321 - 1590333 + g 81 -6.3 -4.82901 | opp_overlap 1590313 GGGAAAACCAGCCCG CTTCT GGA AGAAG TTTTTGTAAGCCCGC EFER_1557 1590732 - 1590586 - | hypothetical protein TERM 2107 1590654 - 1590644 - Gg 81 -4.6 -5.0917 | CTATGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT EFER_1558 1590616 - 1590984 + | putative transposase, IS605 family, IS200 group TERM 2108 1591102 - 1591057 - TR 100 -11.7 -4.62069 | opp_overlap 1591070 1591093, overlap 1591058 1591059 TGGTTAGGTGAAAAA CCGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACGGCGCAC CGGATAAATTCGCCT TERM 2109 1591101 - 1591058 - TR 100 -15.2 -3.3692 | opp_overlap 1591070 1591093, overlap 1591057 1591059 GGTTAGGTGAAAAAC CGCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACGGCGCA CCGGATAAATTCGCC TERM 2110 1591100 - 1591059 - TR 100 -16.5 -2.61831 | opp_overlap 1591070 1591093, overlap 1591058 1591057 GTTAGGTGAAAAACC GCGCCTTATATCCCCGCCC TGAA GGACGGGGTTTTACGGCGC ACCGGATAAATTCGC TERM 2111 1591070 - 1591089 + Tr 89 -10.6 -4.07568 | opp_overlap 1591059 1591058 1591057 AACCGCGCCTTATAT CCCCGCCC TGAA GGACGGGG TTTTACGGCGCACCG lsrG 1591407 - 1591117 - | hypothetical protein lsrF 1592306 - 1591431 - | putative aldolase lsrB 1593355 - 1592333 - | AI2 transporter ; periplasmic-binding component of ABC superfamily TERM 2112 1593257 - 1593236 - G 83 -5.1 -5.03314 | GCCACTGGTAAAAAA TCCCACACC AACC AGTTTGGGA ATAAAAGCAATACGC lsrD 1594359 - 1593367 - | AI2 transporter ; membrane component of ABC superfamily TERM 2113 1593554 - 1593543 - G 70 -3.6 -4.71828 | ATCCCACTAATAAAA CCGC AATG GCAG TGCCGATAATCGAAC TERM 2114 1593653 - 1593631 - G 75 -5.5 -4.72272 | gap 1, overlap 1593632 1593634 GGCGGGCATCAAAAA CGACGCACCG AGAT CGGAGCGT-G CAGAACCAAAATACG TERM 2115 1593769 - 1593759 - G 74 -8.2 -3.86822 | GAATCGCGCTATAAA GCGC CAC GCGC GGGCTTTGTCCAATC TERM 2116 1594362 - 1594373 + r 78 -2.2 -5.52384 | gap 1, opp_overlap 1594355 AGCGAATACGCATTA CGCGG CCT CC-CG TTTTTTTCCTGACGA lsrC 1595387 - 1594359 - | AI2 transporter ; membrane component of ABC superfamily TERM 2117 1594849 - 1594834 - G 75 -4.6 -4.82901 | opp_overlap 1594834, overlap 1594836 1594845 1594846 CCGGTGGCATAAAAA CTGCGT CCAA ACGCCG TCTTCGCCAGCAGCC ego 1596916 - 1595381 - | fused AI2 transporter subunits of ABC superfamily: ATP-binding components TERM 2118 1596544 - 1596524 - G 91 -12.6 -3.85092 | opp_overlap 1596520 ACTATGGAGATCAAA CTGGCAGC CCAGC GCTGCCAG CAAGTTGTTCATCTT lsrR 1597165 - 1598118 + | DNA-binding transcriptional regulator TERM 2119 1598881 - 1598867 - g 70 -5.6 -4.41348 | CTCCTGTCAAAGAAA CCGGCA CAT TGCTGG GCGTGGTAAGTTCAC TERM 2120 1599115 - 1599129 + G 71 -2.1 -5.0133 | CCCGGCATGGTACAA GCTGA ATCTA TTAGC TTTTTTACCGGACTC TERM 2121 1599423 - 1599437 + G 70 -4.2 -4.66953 | overlap 1599416 1599424 ATCAGCGTGTAACTT GCAGCA AAT TGCTGA TTTTTCGAATATTCA lsrK 1598197 - 1599789 + | autoinducer AI-2 kinase TERM 2122 1599803 - 1599824 + T 71 -8.7 -3.30441 | opp_overlap 1599803, overlap 1599789 1599801 1599791 AGTGGCATGATGAAA GCCACATTC TGAT GGGTGTGGC TGTTAGTTATGCGTT TERM 2123 1599915 - 1599938 + T 79 -8.2 -4.19238 | gap 1, opp_overlap 1599891 1599915, overlap 1599907 1599891 GGGCAAAGCTGAAAA GTCCGCT-TTG TGC CAGCAGCGGAC TTTTGGACTTCAACC EFER_1568 1600583 - 1599987 - | putative Glutathione S-transferase family protein TERM 2124 1600448 - 1600438 - G 83 -5.4 -5.14563 | TCGTCTATCAAAAAA GGAA CTT TTCC AAGAGGATGCGGTGA TERM 2125 1601356 - 1601346 - H 73 -5.4 -4.5954 | overlap 1601339 GTAGAGCATAGAAAA CTTC CAG GAAG AATGAGTAAATATTA TERM 2126 1601583 - 1601566 - H 73 -5.7 -4.48823 | opp_overlap 1601569 AACGAATCCATAAAA TAATATC AAGT GATATTA AATGTAAATGGACAT EFER_1569 1601925 - 1602725 + | hypothetical protein, putative transcriptional activator for multiple antibiotic resistance EFER_1570 1604918 - 1602900 - | putative invasin-like protein; putative exported protein EFER_1571 1605910 - 1605041 - | conserved hypothetical protein, putative exported protein TERM 2127 1605884 - 1605897 + g 100 -3.1 -5.93809 | CGTTGTAGAAATAGT CACTG CCAG TAGTG TTTTTTTTATCACGA yddA 1606431 - 1608086 + | putative multidrug transporter fused subunits of ABC superfamily transporter: permease component; ATP-binding component TERM 2128 1608397 - 1608377 - g 78 -11.1 -3.54741 | opp_overlap 1608372, overlap 1608380 GAGTACTTCTTTAAA TCAGGGCGA TAT TCGCCCGGA AAAAATTTCAATTCA TERM 2129 1608394 - 1608380 - g 75 -11.4 -2.90813 | opp_overlap 1608372, overlap 1608377 TACTTCTTTAAATCA GGGCGA TAT TCGCCC GGAAAAAATTTCAAT TERM 2130 1608736 - 1608725 - g 88 -2.2 -5.53991 | opp_overlap 1608731, overlap 1608731 1608733 TATTGATGAAAAAAA CAAG AATG CCTG GAACCAGGGATCTTC TERM 2131 1609974 - 1609998 + G 70 -6.5 -4.18401 | overlap 1609950 1609977 CCTCTTCAGGTCAGC CAGTTTGCG ATCAACC CGCAAATTG TTTTCAGCTATATCA TERM 2132 1610436 - 1610413 - g 78 -7.4 -4.34402 | opp_overlap 1610424, overlap 1610433 TTTTGGATAGCAAAA CTGCGGTCGA TCTC TCAACAGCAG GCGTCTCTACCTACG yddB 1608123 - 1610495 + | putative porin protein TERM 2133 1610514 - 1610538 + F 100 -15 -4.52589 | opp_overlap 1610510 TGAAAAATTGAGTTA GCCGGGTGGG ATTTC CCTACCCGGC TTTTGTATGGAGAAA TERM 2134 1611743 - 1611729 - g 72 -5.7 -4.57073 | overlap 1611731 GACCTGGCTGAAAAA TGCTG CGGAT CAGCA GGCTGAGCGAGACCT TERM 2135 1612192 - 1612177 - g 82 -3.2 -5.20534 | overlap 1612179 AGCAATGAAGAAAAA CTGCAA ATCA TTGCGG TATCAGATAAAGGTG TERM 2136 1612833 - 1612812 - g 71 -2.3 -5.00196 | gap 1, overlap 1612816 GCTGAAAGAACAAAA TG-AACCTGT CGC ACAGGTGGCA CAATGGAAGCGCTTC TERM 2137 1612828 - 1612816 - g 72 -7.7 -3.89307 | overlap 1612812 AAAGAACAAAATGAA CCTGT CGC ACAGG TGGCACAATGGAAGC pqqL 1610545 - 1613343 + | putative zinc protease TERM 2138 1613353 - 1613381 + F 77 -11.1 -2.82516 | overlap 1613356 AAATAAAATATTTCG GAACCACAACTTT AAT ACGGTTGTGGTTC TGTCCTGCTAAAAAA TERM 2139 1614024 - 1614014 - g 88 -8.2 -4.59773 | GCCGACTCCGAAAAA CGGC CAG GCCG TAGGCACCAACACCA gadB 1613670 - 1615070 + | glutamate decarboxylase B, PLP-dependent TERM 2140 1615388 - 1615405 + G 75 -5.5 -4.67256 | TTTCATTAGTCTTTT TCCTGCT ATTA GGCGGGA TTTTGTGGTTTATTC gadC 1615255 - 1616790 + | glutamate:gamma-aminobutyric acid antiporter TERM 2141 1616820 - 1616850 + F 100 -11.2 -5.25803 | opp_overlap 1616815 1616822, overlap 1616822 CGTAACACAACCCAG AACGGGAGTGATGA ATT TGATCACTCCCGTC TTTTTTGTAACCGTT TERM 2142 1616848 - 1616822 - f 100 -13.8 -3.47583 | opp_overlap 1616820 1616822, overlap 1616815 TAACACAACCCAGAA CGGGAGTGATGA ATT TGATCACTCCCG TCTTTTTTGTAACCG TERM 2143 1616822 - 1616848 + F 100 -13.8 -4.25873 | opp_overlap 1616815 1616822, overlap 1616820 TAACACAACCCAGAA CGGGAGTGATGA ATT TGATCACTCCCG TCTTTTTTGTAACCG yddW 1616827 - 1618251 + | putative lipoprotein TERM 2144 1618263 - 1618289 + F 79 -10.8 -3.1978 | overlap 1618261 CTAATCCCACCTTCA CCGCCCGGGT TTCCCTT GCCTGGGCGG TCTTCATCTCAGGAT TERM 2145 1618444 - 1618434 - f 71 -6.8 -4.14739 | TCAGTGAGCGCAAAA CGGT ATA ACCG TAAGGGTGGGCATTA yddV 1618450 - 1619841 + | putative diguanylate cyclase YddV TERM 2146 1622039 - 1622021 - g 70 -4.6 -4.56914 | opp_overlap 1622025 TTACTGAAATTAAAA TCGACAAA AGC TTTGTTGA TCGCTGTCTGAGTGA TERM 2147 1622213 - 1622248 + G 72 -9.7 -3.28912 | overlap 1622214 TTTCCCGGCCCTTAC CCGCCGAAGATATCC CTGGCT GGATGACTTCGGCGC TTCCTCTGCGTATCG TERM 2148 1622214 - 1622247 + G 81 -13.2 -2.57026 | overlap 1622213 TTCCCGGCCCTTACC CGCCGAAGATATCC CTGGCT GGATGACTTCGGCG CTTCCTCTGCGTATC dos 1619866 - 1622271 + | cAMP phosphodiesterase, heme-regulated TERM 2149 1622299 - 1622276 - T 91 -13.2 -2.79183 | TCGACTCTTAGTACA CCTTGCCCAC AAAG GTGGGCAAGA TATCGAAGATCAAAT frmA 1623462 - 1622329 - | alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase TERM 2150 1623335 - 1623317 - G 77 -6 -4.61873 | CCGGACAAAGTAAAA GCATCTGT ATG ACAAACGC CGGTATGGGTGATTT yohL 1623889 - 1623479 - | conserved hypothetical protein; similarity with yaiN TERM 2151 1623978 - 1624010 + r 100 -9.2 -4.64676 | overlap 1623965 TAGACCCGTATGCTT CGCCTGCACC ACGGGTCTGGTTA GGTGCAGGCG TTTTATTAGCGATCA cybB 1624589 - 1624023 - | cytochrome b561 TERM 2152 1624517 - 1624506 - G 79 -2.2 -5.2204 | GATAACCAACAAAAA CACC AGCC AGTG GATACCAATTTGCAG TERM 2153 1625440 - 1625421 - g 79 -10 -3.84719 | gap 1, opp_overlap 1625439, overlap 1625422 AGTGGCAAATTGAAA GGTCACGCG CAA CGCGTG-CC AGTAAAAACGGGTTC TERM 2154 1625449 - 1625469 + G 72 -7.5 -3.92659 | opp_overlap 1625449 1625451, overlap 1625439 1625442 1625452 GCGTGCCAGTAAAAA CGGGTTCCG TGA CGGAACTGG TTTCACTTTTGAGCC TERM 2155 1625469 - 1625449 - g 75 -5.3 -4.72272 | opp_overlap 1625439 1625442 1625449 1625452, overlap 1625451 GCGTGCCAGTAAAAA CGGGTTCCG TGA CGGAACTGG TTTCACTTTTGAGCC gapC 1624659 - 1625741 + | glyceraldehyde-3-phosphate dehydrogenase C TERM 2156 1625775 - 1625749 - T 100 -13.1 -3.84719 | overlap 1625735 1625743 AGCTTTAAACCGAAA GCCGGGTAATA AAGAG CATTACCCGGC AAACAAGTTAGCCAC ydcF 1626591 - 1625791 - | hypothetical protein TERM 2157 1626958 - 1626914 - R 75 -10.2 -2.76046 | gap 1, overlap 1626911 TTAATTTTAATATTA CGAGTTACAGGACAAAACATC ACTC GA-ATTTAGTCCAGTAACTCG TAGTAGCCAGAGTAT EFER_1587 1627863 - 1627006 - | hypothetical protein hrpA 1631921 - 1628076 - | ATP-dependent helicase TERM 2158 1628136 - 1628108 - G 88 -11.2 -4.08216 | gap 1 CCATCGCCTGTAAAA TACG-CTTATCCG AAAT CGGATAAGGCGTA CCAAGTTGTTGAGCG TERM 2159 1629241 - 1629198 - G 72 -4.5 -4.66609 | opp_overlap 1629196 1629198 1629197, overlap 1629232 1629233 GACGCGACCTAAAAA CGCTTCGGCGTAGTTTGGC GCGGGT ACAAAATTACGCCGTACCG GTTTCGGCAACGATT TERM 2160 1630328 - 1630346 + g 73 -3.8 -4.7373 | overlap 1630330 GGAAGTCGGATTCTT TATCGTGG AAG CGACGATG TTTTTCGTCCGATGC TERM 2161 1631774 - 1631798 + g 77 -10 -3.6502 | GATAAGTGATTTCCG GTCGTGCTGC TTCAC GCAGCAGGAC TTTCCCTGCCGCCTG TERM 2162 1631983 - 1632009 + H 75 -3.1 -5.10933 | gap 1, overlap 1631989 TGTTCTGTCATAACG TTAGT-GGGCAG TAGG CTGCCTGATTAA TTTTCTTTTAAATGA azoR 1632179 - 1632784 + | NADH-azoreductase, FMN-dependent ynbD 1634130 - 1632838 - | putative membrane associated phosphatase TERM 2163 1633291 - 1633258 - G 77 -8.9 -4.14243 | overlap 1633261 CAGCCGACGGCAAAA CCAGTGCATCGATAT CCAC ATACCGATGCGCCAG GGCAATGTCAGCCAG ynbC 1635901 - 1634144 - | putative hydrolase ynbB 1636813 - 1635917 - | putative membrane associated CTP-phosphosubstrate transferase TERM 2164 1635962 - 1635950 - G 100 -3.3 -6.17669 | AATAAAATAAAAAAA TACCG GAG CGGTG AAAATTAATGAGTCA TERM 2165 1636097 - 1636076 - G 70 -3.7 -4.59109 | CACATCGCCCAAAAA GCCACTGAC GCCA ATCAGTAAC CCCGCCAATAATGCC ynbA 1637418 - 1636813 - | conserved hypothetical protein; putative inner membrane protein TERM 2166 1637245 - 1637235 - G 71 -2.4 -4.89852 | CCATACGGACAAAAA GCAC GAT GGGC AATAGCAAAAAGAGG ydbD 1639895 - 1637589 - | hypothetical protein TERM 2167 1638287 - 1638297 + g 72 -5.4 -4.58283 | GTTTAATCGACGTGC TCAG ATA CTGA TTTTTCGCCAGATTA TERM 2168 1639954 - 1639919 - R 87 -6.3 -5.15634 | opp_overlap 1639919 1639921 1639923 1639928, overlap 1639923 1639928 CATGCCATTAAAAAA GAAACAAAAGGGAAA TGCATC TTTCCCTTTTGTATA TTCGTTATTCTCGCG TERM 2169 1639921 - 1639952 + r 71 -8.9 -3.36276 | opp_overlap 1639919 1639923 1639928, overlap 1639919 1639923 1639928 TGCCATTAAAAAAGA AACAAAAGGGAAA TGCATC TTTCCCTTTTGTA TATTCGTTATTCTCG TERM 2170 1639923 - 1639950 + r 86 -11.5 -3.23854 | opp_overlap 1639919 1639923 1639928, overlap 1639921 1639919 1639928 CCATTAAAAAAGAAA CAAAAGGGAAA TGCATC TTTCCCTTTTG TATATTCGTTATTCT TERM 2171 1639950 - 1639923 - R 100 -11.5 -5.0917 | opp_overlap 1639923 1639921 1639919 1639928, overlap 1639919 1639928 CCATTAAAAAAGAAA CAAAAGGGAAA TGCATC TTTCCCTTTTG TATATTCGTTATTCT TERM 2172 1639945 - 1639928 - R 86 -5.6 -5.3472 | opp_overlap 1639928 1639923 1639921 1639919, overlap 1639923 1639919 AAAAAAGAAACAAAA GGGAAA TGCATC TTTCCC TTTTGTATATTCGTT TERM 2173 1639928 - 1639945 + r 75 -5.6 -4.70453 | opp_overlap 1639923 1639919 1639928, overlap 1639923 1639921 1639919 AAAAAAGAAACAAAA GGGAAA TGCATC TTTCCC TTTTGTATATTCGTT ydbC 1640819 - 1639959 - | putative aldo/keto reductase, NAD(P)-binding TERM 2174 1640028 - 1639992 - G 71 -9.5 -3.55368 | opp_overlap 1639992 1639994 1639995, overlap 1639994 1639995 ATCCAACGTAGACAA CACGTCCGCAGAAAGAT GCA ATTTTTCTGCGGCCATA TTCTCCCGTAAATGA TERM 2175 1639994 - 1640026 + g 70 -9.9 -3.23572 | opp_overlap 1639992 1639994 1639995, overlap 1639992 1639995 CCAACGTAGACAACA CGTCCGCAGAAAGAT GCA ATTTTTCTGCGGCCA TATTCTCCCGTAAAT TERM 2176 1640026 - 1639994 - G 72 -9.9 -3.34983 | opp_overlap 1639994 1639992 1639995, overlap 1639992 1639995 CCAACGTAGACAACA CGTCCGCAGAAAGAT GCA ATTTTTCTGCGGCCA TATTCTCCCGTAAAT TERM 2177 1639995 - 1640025 + g 80 -13.4 -2.53822 | opp_overlap 1639994 1639992 1639995, overlap 1639994 1639992 CAACGTAGACAACAC GTCCGCAGAAAGAT GCA ATTTTTCTGCGGCC ATATTCTCCCGTAAA TERM 2178 1640993 - 1641016 + r 93 -11.8 -3.71378 | gap 1, opp_overlap 1640993 TTCGGCAATAAAAAA CCGCAAC-CTG TAT CAGCGTTGCGG TTTAGATATCACATG TERM 2179 1641016 - 1640993 - R 100 -11.8 -5.4505 | gap 1, opp_overlap 1640993 TTCGGCAATAAAAAA CCGCAAC-CTG TAT CAGCGTTGCGG TTTAGATATCACATG TERM 2180 1641045 - 1641061 + r 73 -8.7 -3.47029 | opp_overlap 1641028 1641043 1641042 TGCTAAAAATTAGCA CGTTCAG CAT CTGGACG TTACTGTTTCGGTCG paaY 1641652 - 1641062 - | putative hexapeptide repeat acetyltransferase paaX 1642584 - 1641634 - | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive TERM 2181 1641819 - 1641856 + g 76 -10.6 -3.34398 | gap 1, overlap 1641818 GCGCCGTATGTCCTG CCCAGTGT-GCCGGAAG CAACT CCTCCGGCAACAATGGG TCTTTAAGGACGACA paaK 1643997 - 1642684 - | phenylacetyl-CoA ligase TERM 2182 1643034 - 1643048 + g 70 -10 -3.19157 | GTCCACTGATGCGAT CCATGC GGC GCATGG TTCGTGCCGTTCCTG TERM 2183 1643649 - 1643674 + g 70 -4.1 -4.60797 | GCAAGGAACGCGCTA CGATATTGG CCCAGTTA TCAATATCG TTTTGTGTATAGCCG paaE 1645229 - 1644024 - | beta-ketoadipyl CoA thiolase paaI 1645651 - 1645229 - | phenylacetate pathway hotdog-fold thioesterase paaH 1647068 - 1645641 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 2184 1646125 - 1646137 + g 100 -7.7 -5.22137 | ACATCGTCAATTTCC GTGAC ACC GTCAC TTTTATTTTCTACTT TERM 2185 1646655 - 1646644 - G 82 -2.2 -5.40072 | GCCGGGTTAAAAAAA TGCA GCCC CGCA ACACGTTCAGGATTT TERM 2186 1646756 - 1646768 + g 74 -2.6 -5.15969 | AAACTTCCGCCAGCT GTGC AAAGA GCGC TTTTTTGACTTCCAG paaG 1647858 - 1647070 - | acyl-CoA hydratase paaF 1648625 - 1647858 - | enoyl-CoA hydratase-isomerase TERM 2187 1648477 - 1648455 - G 71 -2.1 -5.00616 | gap 1 CCCGGCGGCAAAAAA GCGTGCATTA CCAG TAAT-CACAC AGACCGAAATGCTGG paaJ 1649692 - 1648622 - | subunit of the phenylacetly-CoA oxygenase/reductase paaD 1650197 - 1649700 - | putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation paaC 1650958 - 1650212 - | putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation paaB 1651254 - 1650967 - | putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation paaA 1652195 - 1651266 - | putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation maoC 1652480 - 1654525 + | fused aldehyde dehydrogenase ; enoyl-CoA hydratase TERM 2188 1654538 - 1654559 + F 85 -7.3 -4.90778 | opp_overlap 1654538 TAATCAGTGAATGAA GGGCAAC GGCGAATA GTTGCCC TTTTATTTCACTCAA EFER_1610 1654579 - 1654743 + | hypothetical protein TERM 2189 1655306 - 1655295 - g 70 -3.6 -4.64861 | GCGCTGGAAAACAAA CCGG TTGA CCAG CCACGCAAAGCCGAC tynA 1654773 - 1657046 + | tyramine oxidase, copper-requiring TERM 2190 1657058 - 1657087 + T 80 -11.7 -2.57132 | gap 1, opp_overlap 1657060 1657066, overlap 1657066 TTGATTGTTTCAGAC TATAAAAACGGCAC CTG GTGCCGTTTTT-TA CTTATGAGCGAACAA TERM 2191 1657086 - 1657060 - T 88 -12.4 -2.62396 | opp_overlap 1657058 1657066, overlap 1657066 GATTGTTTCAGACTA TAAAAACGGCAC CTG GTGCCGTTTTTT ACTTATGAGCGAACA TERM 2192 1657066 - 1657080 + T 100 -11.4 -5.32944 | opp_overlap 1657060 1657066, overlap 1657058 TTCAGACTATAAAAA CGGCAC CTG GTGCCG TTTTTTACTTATGAG TERM 2193 1657080 - 1657066 - T 100 -11.4 -4.95155 | opp_overlap 1657066 1657058, overlap 1657060 TTCAGACTATAAAAA CGGCAC CTG GTGCCG TTTTTTACTTATGAG feaB 1658604 - 1657105 - | phenylacetaldehyde dehydrogenase TERM 2194 1658472 - 1658499 + g 78 -5.6 -4.84529 | gap 1 ACGCAATTTCTTGCC CGGTTGCCGGATC AAA GAT-CGCTAACCG TTTTTCACTTTGTGC TERM 2195 1659046 - 1659032 - g 72 -5.6 -4.45544 | opp_overlap 1659032 TGGCAGGAAGTAAAA GGCAGC GAC GATGCC TGGTTTTACACCGTT feaR 1658840 - 1659745 + | DNA-binding transcriptional dual regulator TERM 2196 1659776 - 1659750 - T 71 -8.9 -3.34192 | gap 1, opp_overlap 1659740 1659750 AATTCCGCTAACTAA TTCGCGTTGCAT GTAC AT-CAACGCGAA TTAATTAAATCAGAT TERM 2197 1659750 - 1659776 + T 71 -8.9 -3.37522 | gap 1, opp_overlap 1659750, overlap 1659740 AATTCCGCTAACTAA TTCGCGTTGCAT GTAC AT-CAACGCGAA TTAATTAAATCAGAT EFER_1614 1660177 - 1659857 - | hypothetical protein ydbL 1660560 - 1660234 - | hypothetical protein ynbE 1660750 - 1660565 - | putative lipoprotein ydbH 1663386 - 1660747 - | hypothetical protein TERM 2198 1661053 - 1661068 + g 74 -10.4 -3.53733 | overlap 1661051 CATATTGTCTTTTAC CACCGC ATCT GCGGTG TCTTTATCCAGTCGC TERM 2199 1661503 - 1661481 - G 85 -10 -4.19506 | opp_overlap 1661481 1661485, overlap 1661486 AGCGGAACGGCAAAA CAAAATCAAC ACC GTTGACTTTG TTATCTGGCATCCAG TERM 2200 1661498 - 1661486 - G 86 -6.3 -5.10163 | opp_overlap 1661485 1661481, overlap 1661481 AACGGCAAAACAAAA TCAAC ACC GTTGA CTTTGTTATCTGGCA TERM 2201 1663721 - 1663707 - g 79 -4.2 -5.08824 | opp_overlap 1663717 1663720, overlap 1663708 1663716 TGCTGACTGAAAAAA CGGCAA AAA CTGCCA ACGGCTGTGAAGCCG TERM 2202 1663728 - 1663716 - g 75 -4.7 -4.77925 | opp_overlap 1663717 1663720 1663723, overlap 1663708 1663707 AAAAAACGGCAAAAA CTGCC AAC GGCTG TGAAGCCGTGTGTAT ldhA 1663595 - 1664584 + | fermentative D-lactate dehydrogenase, NAD-dependent TERM 2203 1664591 - 1664612 + F 88 -10.1 -4.13767 | overlap 1664592 CTAGTGTAATCTTAT CGCTCCCCA CCTG TGGGGAGCA TTTTCAGATAACCCC TERM 2204 1664592 - 1664611 + F 100 -13.6 -3.08046 | overlap 1664591 TAGTGTAATCTTATC GCTCCCCA CCTG TGGGGAGC ATTTTCAGATAACCC hslJ 1664686 - 1665108 + | Heat-inducible protein ydbJ 1665371 - 1665105 - | hypothetical protein TERM 2205 1665495 - 1665505 + G 90 -6.8 -5.10461 | overlap 1665491 TTTGATCGTCTTGTG CTGC TGC GCAG TTTTTATTCACTCCG TERM 2206 1665592 - 1665567 - g 74 -8.3 -3.97622 | overlap 1665562 1665589 TGATCGAAAAGATAA GCGATACTCGC TACC GGGAATATCGC AGGCATACCCGCGAG TERM 2207 1666398 - 1666386 - g 79 -4.9 -4.88918 | GGATGCTAAAGAAAA TTCAT CTG ATGAA AAACAACAAACAAGC EFER_1621 1665481 - 1666635 + | hypothetical protein TERM 2208 1668663 - 1668678 + G 73 -4 -4.81249 | GGCCCGTATTAATAC TGTCAT GCAG ATGGCA TTTTTCCATTTGACA ydbK 1666984 - 1670508 + | putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein TERM 2209 1670540 - 1670521 - f 100 -9.2 -6.08342 | opp_overlap 1670521 TAAGAAATAAAAAAA GCCCGGAC ATTT GTTCGGGC TTGTCGATTATATTG TERM 2210 1670521 - 1670540 + F 89 -11.4 -3.47583 | opp_overlap 1670521 TAAGAAATAAAAAAA GCCCGGAC ATTT GTTCGGGC TTGTCGATTATATTG ompN 1670850 - 1671983 + | outer membrane pore protein N, non-specific TERM 2211 1671992 - 1672009 + F 100 -14.1 -5.27779 | opp_overlap 1671989, overlap 1671998 GTTTTAAACCTATAG CCCGCCG GCAA CGGCGGG TTTTTTCCTGTTGCC uspF 1672123 - 1672557 + | stress-induced protein, ATP-binding protein TERM 2212 1672695 - 1672676 - f 73 -3.5 -5.04733 | opp_overlap 1672679, overlap 1672679 GAATGACAAATAAAA GAGCCTG ATGGGA CAGGTTC TAAATGTGCTGACAT TERM 2213 1673083 - 1673070 - g 70 -4.5 -4.47707 | overlap 1673071 CTTGATCAAAAACAA CCAGG ATTC CCTGA ACATATTCTGCCGGA TERM 2214 1673154 - 1673144 - g 75 -5.4 -4.63932 | opp_overlap 1673144 GATTGTCGAAGAAAA TACC TAC GGTA TCGTTAAAGAGAAGA TERM 2215 1673281 - 1673260 - g 90 -10.1 -4.4078 | TCGGTGCAACCAAAA TCGCGCTGG GCCA CCATCGCGA CGATATCCTGCAAAC ydaO 1672827 - 1673762 + | putative C32 tRNA thiolase TERM 2216 1673895 - 1673907 + T 76 -7.7 -4.20806 | TCAGCAATCGTACCC GGCAA GTC TTGCC TTTAATTTTCCCGTC dbpA 1675248 - 1673875 - | ATP-dependent RNA helicase, specific for 23S rRNA EFER_1627 1675450 - 1675277 - | hypothetical protein TERM 2217 1675536 - 1675517 - R 100 -12.2 -5.82316 | ATCAGGTAAAAAAAA GCCGACTT ATCT AAGTCGGC GTCGTACGAATCAAT EFER_1628 1675769 - 1675623 - | hypothetical protein ydaN 1676709 - 1675726 - | putative divalent cation transporter ydaM 1676942 - 1678180 + | conserved hypothetical protein; PAC/PAS and GGDEF domains TERM 2218 1678244 - 1678273 + T 90 -12.9 -2.53392 | GCTTATTCGGCAGCC TCACGCTCAGCGA AAAT TTGCTGAGCGAGA TGCATTGAGGCGTTT pcaC 1678638 - 1678231 - | 4-carboxymuconolactone decarboxylase (CMD) pcaD 1679422 - 1678607 - | 3-oxoadipate enol-lactonase I TERM 2219 1678697 - 1678683 - GR 77 -8.6 -3.97947 | opp_overlap 1678683 1678682 TCGATGGAGGACAAA TGTGAC GCT GTCACA ATTTCCAGGCGAGAG pcaB 1680716 - 1679361 - | 3-carboxy-cis,cis-muconate cycloisomerase (3-carboxymuconate lactonizing enzyme) (CMLE) TERM 2220 1680429 - 1680441 + gr 100 -9.1 -4.63592 | opp_overlap 1680422 1680427, overlap 1680412 CCAGTGAACGTAACG TGCCG CTG CGGCA TTATTTTTCTTCACC paaJ 1681925 - 1680723 - | Beta-ketoadipyl CoA thiolase pcaJ 1682591 - 1681935 - | 3-oxoadipate CoA-transferase subunit B (Beta-ketoadipate:succinyl-CoA transferase subunit B) pcaI 1683324 - 1682602 - | 3-oxoadipate CoA-transferase subunit A (Beta-ketoadipate:succinyl-CoA transferase subunit A) PcaR 1683462 - 1684268 + | Pca regulon regulatory protein ydaL 1684832 - 1684269 - | hypothetical protein TERM 2221 1684914 - 1684941 + H 78 -5.6 -4.90079 | gap 1, overlap 1684916 CTGCTGTGTGTATTG TAGAGTCTG-CGG ATG TCGACAGACTCGA TTTTGTTATTCCACT TERM 2222 1685487 - 1685475 - g 71 -10.5 -2.85508 | overlap 1685464 1685472 GAAACGGCACAATGA CCGGC TAT GCCGG CGGAGTGCAGCGAAA ogt 1685027 - 1685542 + | O-6-alkylguanine-DNA:cysteine-protein methyltransferase TERM 2223 1686199 - 1686213 + G 72 -8.6 -3.78934 | GAGATCAAAGGCGAC CAGGAT ATG ATCCTG TTGTTGTCGAAGAAA fnr 1685737 - 1686489 + | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth EFER_1641 1689774 - 1686610 - | transposase, transposon Tn3 TERM 2224 1687287 - 1687276 - Gf 72 -5.8 -4.3739 | CAGGCGTGGAGAAAA CTGG TATC CCAG CAGCCAGAAAAGGCC TERM 2225 1688235 - 1688256 + gF 71 -2.3 -5.00339 | gap 1, opp_overlap 1688227, overlap 1688237 TGAGAAAGCAGAGCG TGTATC-CCC TGC GGGTGATATG TTTTTCCTTGTTAAT TERM 2226 1688355 - 1688326 - Gf 79 -4.9 -5.00616 | gap 1 TGCGTCGTCAAAAAA CTGCCGCCGTGAGC TGA ACTCCCGGCTG-AG GTAGTCACAGGCATT TERM 2227 1688650 - 1688661 + gF 79 -2.2 -5.24531 | gap 1 ATCCAGATCCTTCAG CGAGC GGA GC-CG TTTTTTCTGCCCAAT EFER_1642 1689743 - 1690336 + | Resolvase transposon Tn3 bla 1690519 - 1691379 + | Beta-lactamase TEM precursor (penicillinase) TERM 2228 1691461 - 1691444 - f 70 -5.6 -4.27584 | opp_overlap 1691444 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA TERM 2229 1691444 - 1691461 + F 78 -5.6 -4.79223 | opp_overlap 1691444 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA uspE 1691595 - 1692545 + | stress-induced protein TERM 2230 1692586 - 1692558 - T 76 -11.1 -2.57781 | gap 1, opp_overlap 1692558, overlap 1692554 TAAACACTGAACTTA CCGGATGGC-GA GTTTCA TCAGCCATCCGG TTTATCACGATTATG TERM 2231 1692558 - 1692586 + T 88 -11.1 -3.90328 | gap 1, opp_overlap 1692558 1692554 TAAACACTGAACTTA CCGGATGGC-GA GTTTCA TCAGCCATCCGG TTTATCACGATTATG ynaJ 1692944 - 1692597 - | conserved hypothetical protein; putative exported protein TERM 2232 1692639 - 1692629 - G 70 -6.8 -4.1347 | CGCCAAGCAGATAAA TCCC CAG GGGA ATGGCCAGCAGAACA TERM 2233 1693434 - 1693420 - g 82 -2.8 -5.28755 | AAACAGATCAAAAAA GGTC GAGATGT GACC AGTGCGCGGATTCTT ynaI 1693096 - 1694130 + | conserved hypothetical protein; putative inner membrane protein TERM 2234 1694146 - 1694177 + T 100 -13.1 -3.57119 | opp_overlap 1694152, overlap 1694152 CGTTAATTTTGTCTA GAAAAACTGGCGC CCAAAT GCGCCAGTTTTAC TTTGAAAGATGTCTA TERM 2235 1694152 - 1694171 + T 100 -10.7 -4.54727 | opp_overlap 1694152, overlap 1694146 TTTTGTCTAGAAAAA CTGGCGC CCAAAT GCGCCAG TTTTACTTTGAAAGA TERM 2236 1694171 - 1694152 - T 100 -10.7 -4.82901 | opp_overlap 1694152 1694146 TTTTGTCTAGAAAAA CTGGCGC CCAAAT GCGCCAG TTTTACTTTGAAAGA mppA 1695845 - 1694232 - | murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2237 1694860 - 1694870 + g 78 -5.4 -4.85599 | GCCGGTTTTTCACCT GTAC CCA GTAC TTTTTCTGCAATCAG mpaA 1696015 - 1696758 + | murein peptide amidase A ycjG 1697857 - 1696733 - | L-Ala-D/L-Glu epimerase TERM 2238 1697542 - 1697562 + gF 71 -9.7 -2.61548 | overlap 1697539 1697559 CCGAAGCATCGCTTT CGCCATAAC GCA GATATGGCG TACATTCTCCTACGC tpx 1697812 - 1698318 + | lipid hydroperoxide peroxidase tyrR 1699912 - 1698371 - | DNA-binding transcriptional dual regulator, tyrosine-binding ycjF 1701121 - 1700060 - | conserved hypothetical protein; putative inner membrane protein ycjX 1702515 - 1701118 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 2239 1702599 - 1702624 + r 100 -14.1 -3.12351 | gap 1, opp_overlap 1702603 AATGATTTGATGAGA CAGAGCGGCGTA TTT TACGCCGC-CTG TTAGATCTGCGGAAA TERM 2240 1702621 - 1702603 - R 100 -14.6 -3.02649 | opp_overlap 1702599 ATTTGATGAGACAGA GCGGCGTA TTT TACGCCGC CTGTTAGATCTGCGG pspE 1702990 - 1702640 - | thiosulfate:cyanide sulfurtransferase (rhodanese) pspD 1703254 - 1703033 - | peripheral inner membrane phage-shock protein pspC 1703625 - 1703263 - | DNA-binding transcriptional activator pspB 1703849 - 1703625 - | DNA-binding transcriptional regulator of psp operon TERM 2241 1703874 - 1703895 + r 95 -12.3 -3.3363 | gap 1 TTACAGGTGATGAGC GGCGGCG-CT TTC AGACGCCGCC TTAAGTTATTATTGA pspA 1704572 - 1703904 - | regulatory protein for phage-shock-protein operon TERM 2242 1705041 - 1705008 - g 81 -5.9 -4.83169 | gap 1, opp_overlap 1705025 ACTGGCGCACAAAAA CGCCACCCCGGACGCT TTG AGCGCGCA-GACGGCG GCACATTGTTCCTCG pspF 1704723 - 1705712 + | DNA-binding transcriptional activator sapA 1705827 - 1707470 + | antimicrobial peptide transporter subunit; periplasmic-binding component of ABC superfamily transporter TERM 2243 1707692 - 1707717 + G 74 -6.1 -4.55128 | AAAGAAGTGTTCCCG GCGACGATGGA GCTG TGCATCCTCGC TTTTGGTTTCGCCCT TERM 2244 1707794 - 1707819 + G 70 -3.9 -4.67755 | opp_overlap 1707794, overlap 1707799 AAATGGCAGGATCAA CTTATCAACGC TCTG GCGCTGTTAGG TTTTTCCATCCCTGT TERM 2245 1707887 - 1707904 + G 91 -10.5 -4.18782 | overlap 1707880 1707879 CTCACGCTGGGCTGG CTGCCCG TTTC CGGGCGG TTTGATTTACTTTAT sapB 1707467 - 1708432 + | antimicrobial peptide transporter subunit ; permease component of ABC superfamily transporter TERM 2246 1708481 - 1708448 - g 93 -11.7 -4.26188 | gap 1, opp_overlap 1708447 1708446 CGTATACAGCGAAAA GCGCCCGCCTGGTACG CTG CGTAC-AGCCTGGCGC AAATTTTATGCTGAT sapC 1708419 - 1709309 + | antimicrobial peptide transporter subunit ; permease component of ABC superfamily transporter TERM 2247 1709694 - 1709675 - g 72 -7.8 -3.92869 | opp_overlap 1709663 GCATGGACTTACAAA GGCCGTTG GTGG CAACGTCC AGGCTGGCGGAAACG sapD 1709309 - 1710301 + | antimicrobial peptide transporter subunit; ATP-binding component of ABC superfamily transporter TERM 2248 1710360 - 1710343 - g 72 -6.9 -4.28361 | opp_overlap 1710352 1710353 GTAATCTGAGTAAAA CGTTCCG CTAC CGGACCG GCTGGTTTCGTCGTC sapF 1710303 - 1711109 + | antimicrobial peptide transporter subunit ; ATP-binding component of ABC superfamily transporter fabI 1711231 - 1712019 + | enoyl-[acyl-carrier-protein] reductase, NADH-dependent TERM 2249 1712111 - 1712137 + F 100 -8.7 -4.61199 | gap 1, opp_overlap 1712109 1712105, overlap 1712114 CACACGCAACTTATA TGCCGGGCGACG ATTC CGTCGCCCA-CA TTTTGTATATACCAT TERM 2250 1712114 - 1712135 + F 80 -11.5 -2.61116 | opp_overlap 1712109 1712105, overlap 1712111 ACGCAACTTATATGC CGGGCGACG ATTC CGTCGCCCA CATTTTGTATATACC yciW 1712241 - 1713395 + | putative amidase or amidotransferase rnb 1713463 - 1715397 + | ribonuclease II TERM 2251 1715927 - 1715948 + G 75 -5.1 -4.72007 | GATACCCCTTCTGTT GCTCGTG ACTTAATG CACGGGC TTTCTTTTGCTGAAC TERM 2252 1717530 - 1717513 - g 70 -4.1 -4.72272 | TTTCCTGACGAAAAA TGGCGTT AACG AACGACA AGGTTTTTTGTTTGC gmr 1715621 - 1717612 + | modulator of Rnase II stability EFER_1669 1717767 - 1717943 + | hypothetical protein yciT 1717912 - 1718745 + | HTH-type transcriptional regulator TERM 2253 1718768 - 1718793 + F 100 -14.9 -2.70543 | opp_overlap 1718764, overlap 1718765 1718770 TCCCCGATATATCTT GATGATTTGCC TTCT GGCAAATCATC TACTCTCTGAGATTT TERM 2254 1718770 - 1718791 + F 81 -11.7 -2.89177 | opp_overlap 1718764, overlap 1718768 1718765 CCCGATATATCTTGA TGATTTGCC TTCT GGCAAATCA TCTACTCTCTGAGAT osmB 1719020 - 1719238 + | lipoprotein TERM 2255 1719357 - 1719324 - T 78 -9 -3.79519 | opp_overlap 1719325, overlap 1719325 1719330 AATTGCATTATGAAA TTTAAAGCCACGAT GTTTAA ACCGTGGCTTTAAT TTTTAACCACCAGCC TERM 2256 1719356 - 1719325 - T 89 -12.5 -2.87229 | opp_overlap 1719325, overlap 1719324 1719330 ATTGCATTATGAAAT TTAAAGCCACGAT GTTTAA ACCGTGGCTTTAA TTTTTAACCACCAGC TERM 2257 1719325 - 1719356 + T 100 -10.3 -4.56597 | opp_overlap 1719324 1719325 1719330 ATTGCATTATGAAAT TTAAAGCCACGAT GTTTAA ACCGTGGCTTTAA TTTTTAACCACCAGC TERM 2258 1719351 - 1719330 - T 72 -8 -3.87551 | opp_overlap 1719325, overlap 1719325 1719324 ATTATGAAATTTAAA GCCACGAT GTTTAA ACCGTGGC TTTAATTTTTAACCA yciH 1719689 - 1719360 - | hypothetical protein pyrF 1720423 - 1719686 - | orotidine-5'-phosphate decarboxylase TERM 2259 1720527 - 1720505 - R 71 -2.1 -5.1861 | gap 1, overlap 1720509 1720511 TGTAGTATCAAAAAA TTAACAGGCA CGTT TACCTGT-AA GGACTGTTTACAGGT yciM 1721783 - 1720614 - | hypothetical protein TERM 2260 1721643 - 1721699 + g 83 -5.3 -5.09762 | gap 3, opp_overlap 1721648 ATCTTGTTGGTTACT CAGAAGGAAGTTAACC-CC-GGCGACAT AATC ACG-CGACAGGCGGTTAGCTTCCTCCTG TTTTGTTTGTTGCGC yciS 1722098 - 1721790 - | conserved hypothetical protein; putative inner membrane protein pgpB 1723043 - 1722249 - | phosphatidylglycerophosphatase B ribA 1723202 - 1723798 + | GTP cyclohydrolase II TERM 2261 1723848 - 1723822 - T 100 -13.7 -3.2056 | opp_overlap 1723822 ATGTAGAGCTATTAA TGCCCGCTGGT TATGT ACCTGCGGGCA TTTTTATTAGTTAAC TERM 2262 1723822 - 1723848 + T 100 -13.7 -5.1963 | opp_overlap 1723822 ATGTAGAGCTATTAA TGCCCGCTGGT TATGT ACCTGCGGGCA TTTTTATTAGTTAAC acnA 1726534 - 1723859 - | aconitate hydratase 1 TERM 2263 1724240 - 1724250 + g 100 -8.2 -5.19212 | TTTACCCGCTATCAC CGCC AGT GGCG TTTTTTCCTGCTGGT TERM 2264 1724751 - 1724734 - G 75 -6.9 -4.32579 | ACATCTCAGAAGAAA CCAGCGC GACA GCCCTGG CAATCTCTTGTGCTG TERM 2265 1725147 - 1725176 + g 72 -5.7 -4.58663 | GAGGCTTTAACCCAT GGCTGTCGCTT CAAACCAA GAGTGACGGCC TTTTTCGCCAGTAAT TERM 2266 1726690 - 1726665 - H 100 -14.8 -3.21595 | opp_overlap 1726660 AACTGTCAGGAGTAA GCCCGATGGT TGATAC ACCATCGGGC GGCAGTATTTTGGAA EFER_1679 1726907 - 1727074 + | hypothetical protein EFER_1680 1727265 - 1727095 - | hypothetical protein yciX 1727451 - 1727266 - | hypothetical protein TERM 2267 1727701 - 1727669 - R 100 -11.6 -4.80167 | CATGAAAAAGGAAAA TATTCGATATCTTT AAAAA AAAGATACCGAATA AAAATGGTAATGATT cysB 1728689 - 1727715 - | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding TERM 2268 1728342 - 1728326 - G 70 -5 -4.48299 | overlap 1728327 GCATATGCAAAGAAA CGCGCG GATAG CGCTCG ATAAAGCCCTTAATC TERM 2269 1728869 - 1728852 - R 100 -12.7 -4.85177 | opp_overlap 1728852 AAATTACACGAAAAA GGGTCGC ATCC GCGACCC TTTTGGAGGAGTTGG TERM 2270 1728852 - 1728869 + r 100 -12.7 -4.09739 | opp_overlap 1728852 AAATTACACGAAAAA GGGTCGC ATCC GCGACCC TTTTGGAGGAGTTGG topA 1731495 - 1728898 - | DNA topoisomerase I, omega subunit TERM 2271 1730574 - 1730585 + g 90 -4.4 -5.40072 | CATACAAACGCTGCG CCAT CATC ATGG TTTTTTTCACGCCAA TERM 2272 1730691 - 1730706 + g 74 -6 -4.56775 | TGTCTTCACGTTCCA GCACGC TGTA GCGCGC TTTTTCCAGCAGACT TERM 2273 1730827 - 1730859 + g 70 -6.9 -4.06502 | opp_overlap 1730842 CGTCGTGGTATTAGC GTCTACTTCCCAGAA TTC TTCCGGGACGAAGGC TTTAATTTCACGCTC yciN 1731877 - 1732128 + | hypothetical protein TERM 2274 1732136 - 1732155 + T 100 -10.7 -4.89063 | opp_overlap 1732136 TTGATTAAAGCAAAA CGCGAGG CCTGAA CCTCGCG TTTGTTTTTACATCA TERM 2275 1732155 - 1732136 - T 100 -11.4 -4.58773 | opp_overlap 1732136 TTGATTAAAGCAAAA CGCGAGGC CTGA ACCTCGCG TTTGTTTTTACATCA sohB 1733212 - 1732163 - | putative inner membrane peptidase TERM 2276 1733160 - 1733134 - G 88 -11.6 -3.84639 | CAACATTGACAATAA TGGCGGCTATCG CGG CGATAGCCAGCA CAACTGTCACGATTT TERM 2277 1733422 - 1733408 - H 76 -7.8 -4.1466 | AGCCAACTGGCAAAA CGATCC GCT GGACCG TTAGGGAGTCGTGAT TERM 2278 1733732 - 1733748 + G 73 -11.5 -2.61144 | opp_overlap 1733732, overlap 1733731 1733729 CGGCGTGCTGCATAA CGCCGGG TTG CTCGGCG ATGTTTGCCCAATGA yciK 1733436 - 1734194 + | putative oxoacyl-(acyl carrier protein) reductase btuR 1734191 - 1734781 + | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase TERM 2279 1734786 - 1734818 + T 72 -9.2 -3.12395 | opp_overlap 1734788, overlap 1734785 1734788 TTGATTATTAAGTGA AAGCACCTCAAAAG TTCGC CTCTTGAGGTGCTA ATTTTAGATACTGAA TERM 2280 1734816 - 1734788 - T 100 -14 -3.79043 | opp_overlap 1734786 1734785 1734788 GATTATTAAGTGAAA GCACCTCAAAAG TTCGC CTCTTGAGGTGC TAATTTTAGATACTG TERM 2281 1734788 - 1734816 + T 86 -11.8 -3.11922 | opp_overlap 1734788, overlap 1734786 1734785 GATTATTAAGTGAAA GCACCTCAAAAG TTCGC CTCTTGAGGTGC TAATTTTAGATACTG TERM 2282 1734866 - 1734853 - T 74 -4.5 -4.84642 | gap 1, opp_overlap 1734853 TTCAAATGAAGAAAA GGCGCC GCA GG-GCC TTTATTTAATACTTA rluB 1735764 - 1734889 - | 23S rRNA pseudouridylate synthase TERM 2283 1735844 - 1735820 - R 75 -8.7 -3.61398 | GCTTTTGTGCAACAA TGAGTCAGA ACTTACA TCTGACTCA CTGATAGTAAAGTCT yciQ 1737872 - 1735977 - | conserved hypothetical protein; putative inner membrane protein TERM 2284 1736879 - 1736892 + g 71 -2.4 -4.93296 | opp_overlap 1736879 CTTCATTAACACAGA TCAG GGTTTG CTGA TTTTTGTCATACTGA TERM 2285 1737763 - 1737798 + g 100 -10.6 -4.62783 | gap 1, opp_overlap 1737764 1737765 1737766 1737768, overlap 1737765 1737765 GCTTCAACATCAAAA AGCG-AGATCCCTTCTT CAT AAGAAGGGATCTCCGTG TTTTTCGGATAACTC TERM 2286 1737795 - 1737764 - G 100 -15.4 -4.87626 | gap 1, opp_overlap 1737763 1737765 1737765, overlap 1737765 1737766 1737768 CTTCAACATCAAAAA GCGAGATCCCTTCTT CAT AAGAAGGGATCTC-C GTGTTTTTCGGATAA TERM 2287 1737795 - 1737765 - G 100 -15.6 -3.51853 | opp_overlap 1737763 1737765 1737765, overlap 1737764 1737766 1737768 TTCAACATCAAAAAG CGAGATCCCTTCTT CAT AAGAAGGGATCTCC GTGTTTTTCGGATAA TERM 2288 1737765 - 1737795 + g 95 -15.6 -2.95166 | opp_overlap 1737764 1737765 1737766 1737768, overlap 1737763 1737765 TTCAACATCAAAAAG CGAGATCCCTTCTT CAT AAGAAGGGATCTCC GTGTTTTTCGGATAA TERM 2289 1737765 - 1737796 + g 100 -15.4 -3.92746 | gap 1, opp_overlap 1737764 1737765 1737766 1737768, overlap 1737765 1737763 TTCAACATCAAAAAG CG-AGATCCCTTCTT CAT AAGAAGGGATCTCCG TGTTTTTCGGATAAC TERM 2290 1737794 - 1737766 - G 100 -19.1 -2.70389 | opp_overlap 1737765 1737765 1737763, overlap 1737764 1737765 1737768 TCAACATCAAAAAGC GAGATCCCTTCTT CAT AAGAAGGGATCTC CGTGTTTTTCGGATA TERM 2291 1737792 - 1737768 - G 95 -15.9 -2.88275 | opp_overlap 1737765 1737765 1737763, overlap 1737766 1737764 1737765 AACATCAAAAAGCGA GATCCCTTCTT CAT AAGAAGGGATC TCCGTGTTTTTCGGA yciO 1738520 - 1737900 - | hypothetical protein TERM 2292 1738366 - 1738377 + g 79 -3.6 -5.1167 | CGAATACGACAAATA CGCT CCAT GGCG TTTTTATCTTCAATT yciV 1739398 - 1738517 - | hypothetical protein TERM 2293 1738980 - 1738962 - G 72 -5.9 -4.33621 | overlap 1738971 1738972 CATTCAACCAAGAAA CGCGCAA AATGA CCGCGCG TCACCGCGCCGCCCT TERM 2294 1738994 - 1738971 - G 70 -5.8 -4.18763 | overlap 1738962 1738972 AAGAAACGCGCAAAA TGACCGCGCG TCAC CGCGCCGCCC TGCACCAGTCGTTGC trpL 1739535 - 1739579 + | trp operon leader peptide TERM 2295 1739623 - 1739641 + F 100 -8.8 -5.75342 | GCAACCAGATACCCA GCCCGC CTAATGA GCGGGC TTTTTTTTGAACAAA TERM 2296 1739696 - 1739686 - g 82 -3.2 -5.20783 | ATGCAAACACAAAAA CCGA CTC TCGA ACTGTTAACCTGCGA trpE 1739671 - 1741233 + | component I of anthranilate synthase TERM 2297 1741909 - 1741885 - g 74 -6.4 -4.46854 | gap 1, overlap 1741886 TTAGCCAACAAGAAA GCCACCAGCTG TTTT CAGC-GGTGGT GCGTGGCGAGCTGAA TERM 2298 1741908 - 1741886 - g 70 -9.9 -3.27389 | gap 1, overlap 1741885 TAGCCAACAAGAAAG CCACCAGCTG TTTT CAGC-GGTGG TGCGTGGCGAGCTGA trpD 1741233 - 1742828 + | fused glutamine amidotransferase (component II) of anthranilate synthase ; anthranilate phosphoribosyl transferase TERM 2299 1742866 - 1742854 - g 70 -4.1 -4.72272 | opp_overlap 1742857 CCGTTTTAGCAAAAA TCGTC GCA GACAA GGCGATTTGGGTAGA TERM 2300 1743219 - 1743232 + G 76 -8.1 -4.28111 | CTGGCGCGCTATTAC CAGGC CGAT GCCTG TTTATTAATGCTGTC TERM 2301 1743386 - 1743369 - g 70 -6.3 -4.26076 | GCATTGGGAGCAAAA GTCGTTG GCAT CAACAAC CGCGATCTGCGTGAT TERM 2302 1744099 - 1744087 - g 86 -10.5 -3.89614 | opp_overlap 1744086 1744085 1744083 TGGAAGCGGCACAAA CCGGC TGC GCCGG GCTTGATTTTAATTC trpC 1742832 - 1744190 + | fused indole-3-glycerolphosphate synthetase ; N-(5-phosphoribosyl)anthranilate isomerase TERM 2303 1744331 - 1744313 - g 72 -5.2 -4.58395 | overlap 1744316 GTCAGCGCGCAAAAA GATCCTGA ATT TCAGGCCC AGTTTAACGACCTGC TERM 2304 1745320 - 1745306 - g 70 -4.2 -4.66264 | opp_overlap 1745306 GAAAACCCGGAAAAA GAGCAG CTG CTGGTC GTTAATCTTTCCGGT trpB 1744202 - 1745395 + | tryptophan synthase, beta subunit trpA 1745395 - 1746201 + | tryptophan synthase, alpha subunit TERM 2305 1746233 - 1746213 - T 100 -12.6 -3.69323 | opp_overlap 1746213 TTAGTACGAGGCAAA CCGCCAGA AAACA TCTGGCGG TTTATTGATGGTAAA TERM 2306 1746213 - 1746233 + T 100 -12.6 -4.2704 | opp_overlap 1746213 TTAGTACGAGGCAAA CCGCCAGA AAACA TCTGGCGG TTTATTGATGGTAAA ompW 1746983 - 1746252 - | outer membrane protein W TERM 2307 1746673 - 1746663 - G 72 -8.2 -3.79519 | overlap 1746664 AACCTTATGACGAAA CGGC GAT GCCG CCAGCAATTCCACAC TERM 2308 1746846 - 1746828 - G 82 -3 -5.28778 | overlap 1746830 AGCACGCATAAAAAA TTCGCCTG CTT CATGCGCA AAGGCACTGCCAGAG TERM 2309 1747296 - 1747314 + G 82 -3.1 -5.20154 | opp_overlap 1747299, overlap 1747296 1747297 GCGTTCCGGTGGAAT TGACTGA GCCCG TCAGTCC TTTTTTGCGTTGTAT ykgJ 1747157 - 1747591 + | putative ferredoxin TERM 2310 1748142 - 1748126 - g 70 -4.4 -4.46212 | gap 1, overlap 1748128 TGGTGCAGGACAAAA TG-GGCG TTTT CGCCTCA ATGCGCTCCAGTATT yciC 1747618 - 1748361 + | conserved hypothetical protein; putative inner membrane protein TERM 2311 1748413 - 1748425 + G 91 -3.3 -5.51165 | CAGTTTCTTGATTTT CTACC GCT GGTTG TTTTTTTCGCGTTTT yciB 1748392 - 1748931 + | putative intracellular septation protein involved in cell division TERM 2312 1748960 - 1748937 - f 100 -13.8 -3.75461 | opp_overlap 1748937 TAAATCCTGAGCAAA GCGCCAGTCC TGCA GGGCTGGCGC TTTCTTTTCACCTCT TERM 2313 1748937 - 1748960 + F 100 -16 -4.67651 | opp_overlap 1748937 TAAATCCTGAGCAAA GCGCCAGTCC TGCA GGGCTGGCGC TTTCTTTTCACCTCT yciA 1749039 - 1749437 + | putative hydrolase TERM 2314 1749468 - 1749440 - T 86 -11.8 -3.05844 | opp_overlap 1749441 1749446, overlap 1749446 GCCCGTACCGTAATA GCAAAAGCCTCC TGTCC GGAGGCTTTTGT TTTTTATGGCTGATT TERM 2315 1749441 - 1749467 + T 100 -15.3 -5.28778 | opp_overlap 1749440 1749446, overlap 1749446 CCCGTACCGTAATAG CAAAAGCCTCC TGTCC GGAGGCTTTTG TTTTTTATGGCTGAT TERM 2316 1749446 - 1749462 + T 100 -9.4 -5.49579 | opp_overlap 1749440 1749446, overlap 1749441 ACCGTAATAGCAAAA GCCTCC TGTCC GGAGGC TTTTGTTTTTTATGG TERM 2317 1749462 - 1749446 - T 95 -9.4 -4.43012 | opp_overlap 1749446 1749441, overlap 1749440 ACCGTAATAGCAAAA GCCTCC TGTCC GGAGGC TTTTGTTTTTTATGG tonB 1750309 - 1749482 - | membrane spanning protein in TonB-ExbB-ExbD complex TERM 2318 1750246 - 1750236 - G 77 -3.2 -5.08824 | GTTTCAGTTAAAAAA CCAG GCC CTGA TTTTAAATGCAAATA yciI 1750431 - 1750727 + | putative enzyme TERM 2319 1750739 - 1750759 + F 86 -9.7 -3.97388 | TTGATAAATTCGAAG GGGCACC TGTTAAC GGTGCCC TTTGTCATCAAATGT TERM 2320 1752502 - 1752512 + G 75 -6.8 -4.38092 | opp_overlap 1752483, overlap 1752499 CACTCTGGCAGCGAG TCGC AGA GCGA TTGTTTTACTTCTTC cls 1751082 - 1752542 + | cardiolipin synthase 1 yciU 1752576 - 1752905 + | hypothetical protein TERM 2321 1752931 - 1752912 - T 93 -12.2 -3.61089 | opp_overlap 1752915, overlap 1752906 CGTGAATAATGACAA TGAGCAGC ATAT GCTGCTCA TTCAGAGTGTTGACA cikL 1754083 - 1753088 - | putative voltage-gated potassium channel TERM 2322 1753977 - 1753957 - GT 100 -11.1 -4.56597 | opp_overlap 1753957 CCTCCCTTGTAAAAA GGGCCAGCA ATT TGCCAGCCC TTTGACGCTTTATAA oppF 1754991 - 1753987 - | oligopeptide transporter subunit ; ATP-binding component of ABC superfamily TERM 2323 1754810 - 1754798 - GR 79 -7.7 -4.25283 | ATGGCGCGAGCAAAA GTGGA TTT TCCAC ATCCAGACTCACCCA oppD 1756001 - 1754988 - | oligopeptide transporter subunit ; ATP-binding component of ABC superfamily oppC 1756921 - 1756013 - | oligopeptide transporter subunit ; membrane component of ABC superfamily TERM 2324 1756083 - 1756073 - G 76 -4 -4.91429 | AAAGTTGAAACAAAA TAGT GTC ACTA CCAGGAAGCCAGCCG TERM 2325 1756889 - 1756901 + g 100 -9.1 -5.1963 | GTCACTGAAATTTTC CAGCG CCT CGCTG TTTTTCTTACTTAAC oppB 1757856 - 1756936 - | oligopeptide transporter subunit ; membrane component of ABC superfamily TERM 2326 1757447 - 1757429 - G 74 -3 -4.89477 | overlap 1757430 1757431 GGGGCAACAACAAAA CTGGGG ATAACGA CCCCGG TCATCGCCACTCCCA TERM 2327 1757937 - 1757899 - R 100 -9.1 -5.51165 | gap 2, opp_overlap 1757906, overlap 1757903 1757905 1757906 AAAATGCGAAAAAAA CAGACACCGTGGAGCAGAT ATG ACCTGCTCCAC-GTAT-TG CCATTAGTGCTTCAC TERM 2328 1757934 - 1757903 - R 88 -11 -3.76885 | gap 1, opp_overlap 1757906, overlap 1757899 1757905 1757906 TGCGAAAAAAACAGA CACCGTGGAGCAGAT ATG ACCTGCTCCAC-GTA TTGCCATTAGTGCTT TERM 2329 1757933 - 1757905 - R 100 -13.9 -3.44915 | opp_overlap 1757906, overlap 1757903 1757899 1757906 CGAAAAAAACAGACA CCGTGGAGCAGAT ATG ACCTGCTCCACGT ATTGCCATTAGTGCT TERM 2330 1757906 - 1757932 + r 100 -15.2 -3.10464 | opp_overlap 1757906 1757905 1757903 1757899 GAAAAAAACAGACAC CGTGGAGCAGAT ATG ACCTGCTCCACG TATTGCCATTAGTGC TERM 2331 1757932 - 1757906 - R 100 -17.4 -2.65322 | opp_overlap 1757906, overlap 1757905 1757903 1757899 GAAAAAAACAGACAC CGTGGAGCAGAT ATG ACCTGCTCCACG TATTGCCATTAGTGC oppA 1759572 - 1757941 - | oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2332 1759537 - 1759550 + g 74 -2.3 -5.03227 | opp_overlap 1759533 CGCTGTCAAGACGGC GGCTG CCAC CAGGC TTTTCTTTGTCATGT TERM 2333 1760395 - 1760413 + r 95 -7.4 -5.53288 | opp_overlap 1760395 ATAAACGATCTGAAA CGGAGC TAAAAGC GCTCCG TTTTTTTAGGTTGAA ychE 1761079 - 1760432 - | conserved hypothetical protein; putative inner membrane protein TERM 2334 1762422 - 1762396 - g 74 -8.8 -3.89435 | overlap 1762387 1762390 GGCAAAGAACTGAAA GCTGTTCAGGAT GTC ATCCTGAAAAAC GGTGCTCTGAACGCA adhE 1761556 - 1764231 + | fused acetaldehyde-CoA dehydrogenase ; iron-dependent alcohol dehydrogenase ; pyruvate-formate lyase deactivase TERM 2335 1764227 - 1764214 - T 87 -4.5 -5.43487 | opp_overlap 1764214, overlap 1764216 AAAGCAGAGAAAAAA GCGAA AAAA TCCGC TTAATTTCTTCATCT TERM 2336 1764277 - 1764306 + T 100 -9.3 -4.59109 | overlap 1764279 GCTCCTCTTGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 2337 1764279 - 1764304 + T 100 -16.3 -3.90762 | overlap 1764277 TCCTCTTGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 2338 1765623 - 1765648 + T 100 -13.4 -3.61398 | opp_overlap 1765623 ATGAGCATAAAAAAA TCCGGAAACG AGTGAA CGTTTCCGGA TTCTTACACAGCCAC TERM 2339 1765648 - 1765623 - T 100 -13.4 -5.67967 | opp_overlap 1765623 ATGAGCATAAAAAAA TCCGGAAACG AGTGAA CGTTTCCGGA TTCTTACACAGCCAC TERM 2340 1765818 - 1765776 - T 100 -8.5 -5.26918 | gap 1, opp_overlap 1765776 ATATTCGATAAAAAA GCTGATGT-CCGCTGAAACA ATGC TGTTCCTGCGTTACACCAGC TTTATCACGGTCAAA tdk 1766492 - 1765839 - | thymidine kinase/deoxyuridine kinase hns 1767151 - 1767564 + | global nucleic acid-binding transcriptional dual regulator H-NS TERM 2341 1767604 - 1767587 - T 83 -9.1 -4.1466 | opp_overlap 1767587 ATTGAATGCTTAAAA TCCCGCC ACTG AGCGGGA TTTTTTATTGTTCCT TERM 2342 1767587 - 1767604 + T 100 -8.4 -5.66229 | opp_overlap 1767587 ATTGAATGCTTAAAA TCCCGC CACTGA GCGGGA TTTTTTATTGTTCCT TERM 2343 1767671 - 1767653 - T 100 -9.5 -5.28176 | opp_overlap 1767653 TTCAGCCATAAAAAA CGGCGCC TTTTC GACGCCG TACTTTTGACCACTA galU 1768605 - 1767697 - | glucose-1-phosphate uridylyltransferase rssB 1769869 - 1768808 - | response regulator of RpoS rssA 1770851 - 1769913 - | putative esterase of the alpha-beta hydrolase superfamily TERM 2344 1770891 - 1770907 + H 90 -4.4 -5.63517 | gap 1, opp_overlap 1770881, overlap 1770891 1770892 ACATAGCGCTACCCA G-GGCGT CCAT ACGCCAC TTTTTTATTTCAGGG TERM 2345 1771038 - 1771051 + G 72 -5.9 -4.30987 | TACAACTCATGCGTT CGCGT TACA GCGCG TTTGTTATGAAAGAT ychJ 1770932 - 1771390 + | hypothetical protein purU 1771443 - 1772285 + | formyltetrahydrofolate hydrolase EFER_1726 1773935 - 1772844 - | putative Linoleoyl-CoA desaturase TERM 2346 1773655 - 1773645 - G 77 -6.8 -4.58395 | overlap 1773646 TTTACCGCGCAAAAA CGCA TCG TGCG AAGCGTCATGCACCA EFER_1727 1775046 - 1773922 - | conserved hypothetical protein, putative membrane protein EFER_1728 1775653 - 1775039 - | putative membrane protein, putative Acid phosphatase/Vanadium-dependent haloperoxidase TERM 2347 1775174 - 1775159 - G 86 -9 -4.3208 | TTGCAGAATCGAAAA GGCGAT AGCT ATCGCC CAGACCACGCTCATT TERM 2348 1775394 - 1775375 - G 71 -3.4 -4.76963 | overlap 1775379 CCAGAGAAGATAAAA CAGACCCG CAAC CAGGGCCG AAAGTTGCATTGCGC EFER_1729 1776972 - 1775638 - | conserved hypothetical protein, Putative coenzyme synthetase TERM 2349 1775769 - 1775759 - GR 80 -5.4 -4.96501 | overlap 1775767 TGGCACAAAAACAAA GCAT TCA ATGC TTCCCGGCAATGCTC EFER_1730 1777727 - 1776921 - | conserved hypothetical protein, putative Metallo-beta-lactamase TERM 2350 1777335 - 1777309 - GR 72 -6.4 -4.37092 | AGTCCTGGCACAAAA GCCTGGCGCAGC GCA GCGACACCACGC AGAGTTCTTACCTGC EFER_1731 1778721 - 1777705 - | conserved hypothetical protein, Putative nucleotide di-P-sugar epimerase or dehydratase (Putative dehydrogenase) EFER_1732 1779725 - 1778718 - | putative 3-oxoacyl-[acyl-carrier-protein] synthase TERM 2351 1779662 - 1779706 + g 76 -12.2 -2.62371 | gap 1, overlap 1779661 1779665 TTTTATCAGGGGGTA AGGCGATCCCCGTGGCGATTA TTTT TAA-CGCCGCGGAGATCGTCG GTTGATTAGGTCGAT TERM 2352 1779665 - 1779703 + g 90 -14.7 -2.6072 | gap 1, overlap 1779662 1779661 TATCAGGGGGTAAGG CGATCCCCGTGGCGATTA TTTT TAA-CGCCGCGGAGATCG TCGGTTGATTAGGTC TERM 2353 1779820 - 1779800 - R 100 -9 -4.6902 | opp_overlap 1779798 1779793 1779800 CTACAATCCGAAAAA TCGGCAGT GTATA ACCGCCGA TGTTTGGTTTAGATA narI 1780514 - 1779837 - | nitrate reductase 1, gamma (cytochrome b(NR)) subunit narJ 1781224 - 1780514 - | molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 narH 1782759 - 1781221 - | nitrate reductase 1, beta (Fe-S) subunit TERM 2354 1782662 - 1782676 + g 75 -5.6 -4.60041 | TATTCCACGCCTTCA CGGCTG GTC CAGACG TTTTTACAGGTCACT narG 1786499 - 1782756 - | nitrate reductase 1, alpha subunit TERM 2355 1783595 - 1783608 + g 73 -9.5 -3.63228 | overlap 1783592 CCGCCCAGGCTTTCA CGGCC ACCT GGCCG TTGGTTTCTGGTGCC TERM 2356 1783943 - 1783963 + g 70 -5.3 -4.41616 | overlap 1783944 CAGAGTCGTGCTGGA TCGGCAGCG TAA CGATGTCGG TTTCTTTGCCCAGAT TERM 2357 1784098 - 1784085 - G 72 -6.7 -4.1552 | CAGCGGGTGAATAAA CGGAT GCAT ATCCG AAGTATTCATGTCGT TERM 2358 1785137 - 1785150 + g 70 -6.7 -4.11394 | GTTTTACCGGCAGCT TGTGC AGCA GCACA TTTTCCAGCTCCACT TERM 2359 1786213 - 1786232 + g 76 -10.6 -3.34227 | opp_overlap 1786193, overlap 1786207 CAGGAGTAGCTGGCA CCACGCGG GCAG CCGCGAGG TTCATGGTTTGGTAG TERM 2360 1786480 - 1786449 - G 77 -10.3 -3.57263 | gap 1, opp_overlap 1786443 ATGCCCATCGGCAAA GGTTTCGCC-CTTC TGTTT GAAGTAGCGAAACC GGTCCAGGAATTTAC TERM 2361 1786868 - 1786850 - R 100 -14.6 -5.47218 | CGGCAGGTAAAAAAA GCGCGACA TTA TGTCGCGC AAAGGATAATCAAAT narK 1788283 - 1786892 - | nitrate/nitrite transporter TERM 2362 1787050 - 1787030 - G 83 -9.7 -4.06419 | TTTCGGGATAAAGAA GCCACCGAT AGC ACCGATGGC TGAGATAAAGCCCAG TERM 2363 1788097 - 1788087 - G 81 -6.8 -4.67038 | opp_overlap 1788087 GTCGTAAAATTAAAA CCGA CTT TCGG TAAGTTCACCGCAAC TERM 2364 1789837 - 1789862 + G 74 -8.3 -3.92542 | TCTATTGCCCAATCT CTCTCTTGCAT GAAG ATGCAGGTGAG TTGTTTACAGATGCA TERM 2365 1790303 - 1790288 - g 79 -10.4 -3.84674 | opp_overlap 1790286 1790285 ACGGCATGATAATAA TGCGCG ACCG CGCGCA AAGTTTACGAGGCGA narX 1788622 - 1790418 + | sensory histidine kinase in two-component regulatory system with NarL narL 1790411 - 1791061 + | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) ychP 1792315 - 1791062 - | putative adhesin/invasin ychN 1792645 - 1792998 + | hypothetical protein TERM 2366 1793040 - 1793000 - T 78 -9.2 -3.58037 | gap 2, overlap 1793002 TATTAACGTTTTAAA TATTTACGGGGCTGAGCTAC CTG GCAGCT--GCCCCGTAAATG TGACGCTGCATCAGG TERM 2367 1793038 - 1793002 - T 89 -11.8 -3.36569 | gap 2, overlap 1793000 TTAACGTTTTAAATA TTTACGGGGCTGAGCTAC CTG GCAGCT--GCCCCGTAAA TGTGACGCTGCATCA chaC 1793746 - 1793051 - | regulatory protein for cation transport TERM 2368 1793526 - 1793516 - G 86 -6.8 -4.90525 | TAACCGCAAACAAAA GGCA CGA TGCC AGCCAGGTAGTGTGC chaB 1794134 - 1793904 - | putative conserved cation transport regulator chaA 1794405 - 1795505 + | calcium/sodium:proton antiporter TERM 2369 1795514 - 1795539 + T 81 -11.1 -3.2396 | CGCCTGATAATTATT CTTCCCCGGTT GAAA ATCCGGGGAGG TTACTGATAATCCTT EFER_1745 1795926 - 1795540 - | hypothetical protein TERM 2370 1796143 - 1796103 - R 82 -10.6 -3.66666 | opp_overlap 1796112, overlap 1796112 TGCAAAACTTGCAAA TACGAAAAAGCCTTACCG CTGAT CGATAAGGCTTTTTTGTT TACGCCAAAAATTAC TERM 2371 1796112 - 1796134 + r 100 -7.7 -5.63517 | opp_overlap 1796112 1796103 TGCAAATACGAAAAA GCCTTACCG CTGAT CGATAAGGC TTTTTTGTTTACGCC TERM 2372 1796134 - 1796112 - R 100 -9.9 -4.93696 | opp_overlap 1796112, overlap 1796103 TGCAAATACGAAAAA GCCTTACCG CTGAT CGATAAGGC TTTTTTGTTTACGCC kdsA 1797009 - 1796155 - | 3-deoxy-D-manno-octulosonate 8-phosphate synthase ychA 1797854 - 1797045 - | putative transcriptional regulator TERM 2373 1797686 - 1797662 - G 79 -2.1 -5.24531 | gap 1 ATTCGCCATAAAAAA GCGCCAACAG TTTTTC CAGTT-GCGC ATCCTGCGACAGAAA TERM 2374 1797953 - 1797974 + r 71 -8.7 -3.28712 | ATTTCCACTGGCTTT GCGCACGAT GGTA ATCATGCGC TTGTAAACCCAAAAC EFER_1748 1798009 - 1797932 - | hypothetical protein prmC 1798891 - 1798061 - | N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 prfA 1799973 - 1798891 - | peptide chain release factor RF-1 TERM 2375 1799343 - 1799304 - G 80 -11.4 -3.33037 | opp_overlap 1799313 1799337, overlap 1799306 1799312 AGCGGAAAGTATCAA TACGCAAATCTGCCGGGT TAAT ATCCGGCAGTTCTGCGTC AGGCAGTTCTGGCAT TERM 2376 1799341 - 1799306 - G 89 -14 -3.22924 | opp_overlap 1799313 1799337, overlap 1799304 1799312 CGGAAAGTATCAATA CGCAAATCTGCCGGGT TAAT ATCCGGCAGTTCTGCG TCAGGCAGTTCTGGC TERM 2377 1799313 - 1799334 + g 83 -12.3 -3.35679 | opp_overlap 1799312 1799306 1799304 TATCAATACGCAAAT CTGCCGGGT TAAT ATCCGGCAG TTCTGCGTCAGGCAG hemA 1801271 - 1800015 - | glutamyl tRNA reductase TERM 2378 1801356 - 1801346 - H 74 -4.6 -4.75472 | overlap 1801347 GCGAGATCAATAAAA GGGA GCG CCCC CTTTTGGAGTAATTG TERM 2379 1802033 - 1802023 - g 75 -6.8 -4.371 | overlap 1802024 GTTATGACACCAAAA CGCA ACC TGCG ATGCCTGCCAACATG lolB 1801485 - 1802108 + | chaperone for lipoproteins TERM 2380 1802362 - 1802337 - g 76 -7.5 -4.25104 | opp_overlap 1802342, overlap 1802339 1802342 GGTTGCTGATGAAAA CAGCAGCCGCC AGCG GGCGACTTCTA GCGGGAAGCGGTGCG ispE 1802108 - 1802959 + | 4-diphosphocytidyl-2-C-methylerythritol kinase TERM 2381 1802979 - 1802993 + F 80 -10 -3.62522 | GGCAAGCTGAGTTAC GGTGAC AAC GTCACC TTGTTCCAGACGTTG prsA 1803110 - 1804057 + | phosphoribosylpyrophosphate synthase TERM 2382 1804076 - 1804089 + F 100 -9.5 -5.76633 | opp_overlap 1804076 1804074 AACCCGGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2383 1804089 - 1804076 - f 74 -9.5 -3.34894 | opp_overlap 1804076, overlap 1804074 AACCCGGCTCAAAGA CCCGC TGCG GCGGG TTTTTTTGTCTGTAA TERM 2384 1804720 - 1804692 - g 70 -3.8 -4.60487 | gap 1, opp_overlap 1804708 CATTATCTGCAAAAA GTCGGC-GCTC TTTTTATG GCGCTGCCGAC CATTAATGTGGGTGA ychM 1804182 - 1805879 + | putative transporter TERM 2385 1805917 - 1805889 - T 100 -12.5 -4.92363 | gap 1, opp_overlap 1805889 AAATAGGCATAAAAA CGGCCAGTCAGC AATAAA GC-GACTGGCCG TTTTTACAAATCAAG TERM 2386 1805889 - 1805917 + T 100 -12.5 -4.59773 | gap 1, opp_overlap 1805889 AAATAGGCATAAAAA CGGCCAGTCAGC AATAAA GC-GACTGGCCG TTTTTACAAATCAAG ychH 1806214 - 1805936 - | conserved hypothetical protein; putative inner membrane protein TERM 2387 1806195 - 1806181 - G 72 -8.6 -3.82191 | CCAACCCCATAAGAA CGTTAC CGA GTAACG AAGCGTTTTTGCGTT pth 1806488 - 1807072 + | peptidyl-tRNA hydrolase TERM 2388 1807650 - 1807639 - g 72 -5.8 -4.30719 | CGTGTGCAGAAGAAA GCCA AAGG TGGC GATAAAGACGCTAAA ychF 1807189 - 1808280 + | putative GTP-binding protein TERM 2389 1808310 - 1808326 + F 100 -12.3 -5.76633 | opp_overlap 1808310 CAATCTACTGAAAAA TCCACGC CAG GCGTGGA TTTTTTTATATCTCA TERM 2390 1808326 - 1808310 - f 100 -12.3 -4.68424 | opp_overlap 1808310 CAATCTACTGAAAAA TCCACGC CAG GCGTGGA TTTTTTTATATCTCA TERM 2391 1809767 - 1809754 - g 76 -8.1 -4.2558 | GACCGTGCAGTAAAA GTCGC TGAG GCGAC CAGGGCCCATCTGTT treA 1808434 - 1810179 + | periplasmic trehalase TERM 2392 1810189 - 1810204 + T 100 -11.8 -4.15453 | opp_overlap 1810183 AACTAATTATTTGAA CGGCCC CGCA GGGCCG TTTTCAGGTAAGTTA ymgE 1810471 - 1810217 - | putative inner membrane protein with transglycosylase-associated domain TERM 2393 1810492 - 1810525 + H 72 -9.7 -2.82623 | gap 1, opp_overlap 1810495, overlap 1810495 GACCCTCTTTCCAGT GAAT-CCGGCGCAAGA GGT TCTTGCGTCAGCATTC TAATTATAGGCAACG ycgR 1810819 - 1811553 + | putative regulator emtA 1812176 - 1811565 - | lytic murein endotransglycosylase E TERM 2394 1811602 - 1811628 + g 74 -2.8 -5.02074 | opp_overlap 1811605, overlap 1811602 1811605 1811606 TGCAGTTTCCAGATG TAACGCGGCGCC TGA GGTGCCGGATGA TTTTTTGCCACATGG TERM 2395 1812030 - 1812042 + g 93 -10.5 -4.3208 | CGGATCGACATTCCA GGCCG CTC CGGCC TTTTGGCTTATCGGC ldcA 1812275 - 1813189 + | L,D-carboxypeptidase A TERM 2396 1814274 - 1814285 + G 79 -4.4 -4.91712 | TCCGCGGTTTTAATC TACG GGAA CGTA TTTTTATCAGTTGGG cvrA 1813286 - 1815019 + | putative cation/proton antiporter TERM 2397 1815067 - 1815021 - T 76 -8.1 -4.16284 | gap 1, opp_overlap 1815024, overlap 1815025 1815064 AGATTGCCGAATAAA CTCATCATTACCGGAGAGAGAC GACT GTCT-TCTCCGGTATGAATGCG TTACACTGTCACTAC TERM 2398 1815062 - 1815025 - T 81 -11.6 -2.75825 | gap 2, opp_overlap 1815024, overlap 1815021 TGCCGAATAAACTCA TCATTACCGGAGAGAGAC GACT GTCT-TCTCCGGT-ATGA ATGCGTTACACTGTC dadX 1816138 - 1815068 - | alanine racemase 2, PLP-binding dadA 1817448 - 1816150 - | D-amino acid dehydrogenase TERM 2399 1817117 - 1817133 + g 84 -7.9 -4.70515 | overlap 1817118 CGACTGTACTCCGCC AGGCGCA CCA TGCGCCC TTTGTTTTCCATATA TERM 2400 1817118 - 1817132 + g 80 -11.4 -3.41224 | overlap 1817117 GACTGTACTCCGCCA GGCGCA CCA TGCGCC CTTTGTTTTCCATAT TERM 2401 1817350 - 1817311 - G 71 -10.6 -2.92102 | overlap 1817310 ATACCCCGGAGAAAT TTGCCCGGCATTGGCAGC ACTG GTTTCCAGTGCCGGGCCA GGCTCACGATCAATG TERM 2402 1818545 - 1818519 - g 85 -7.3 -4.87665 | gap 1 TTTTATGGAGAAAAA CGC-GCCATTAC TGGA GTCATGGCAGCG TGAGATCCTGCGAAT TERM 2403 1818951 - 1818963 + G 75 -5.5 -4.60487 | GTCACCGAAGGTAAT GCGAG ATT TTCGC TTTTTCACCGTCCTG ycgB 1817770 - 1819302 + | hypothetical protein TERM 2404 1819333 - 1819358 + T 72 -7.5 -3.98172 | opp_overlap 1819337, overlap 1819335 1819337 CTTTCTCGTTGATCA AAAACCCCCTC AGCT GAGGGGGTCTC TTTATCACTGTTACT TERM 2405 1819335 - 1819356 + T 80 -10.1 -3.57639 | opp_overlap 1819337, overlap 1819333 1819337 TTCTCGTTGATCAAA AACCCCCTC AGCT GAGGGGGTC TCTTTATCACTGTTA TERM 2406 1819337 - 1819354 + T 95 -12.7 -3.3539 | opp_overlap 1819337, overlap 1819335 1819333 CTCGTTGATCAAAAA CCCCCTC AGCT GAGGGGG TCTCTTTATCACTGT TERM 2407 1819354 - 1819337 - T 100 -12.7 -4.72272 | opp_overlap 1819337 1819335 1819333 CTCGTTGATCAAAAA CCCCCTC AGCT GAGGGGG TCTCTTTATCACTGT fadR 1820088 - 1819369 - | DNA-binding transcriptional dual regulator of fatty acid metabolism nhaB 1820310 - 1821854 + | sodium:proton antiporter TERM 2408 1821862 - 1821881 + F 95 -7.8 -5.04249 | opp_overlap 1821860 1821858 1821862 TTTCGTAACAACATA CCGGGC TAATCACT GCCCGG TTTATTTTTTCGCCG dsbB 1821996 - 1822526 + | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I TERM 2409 1822577 - 1822560 - T 86 -9.8 -4.02707 | opp_overlap 1822560 TAAAGATCGAAATAA GGGGGC ACAATG GCCCCC TTTTCATTATTGATT TERM 2410 1822560 - 1822577 + T 100 -9.8 -4.58644 | opp_overlap 1822560 TAAAGATCGAAATAA GGGGGC ACAATG GCCCCC TTTTCATTATTGATT eaeH 1826148 - 1822591 - | putative attaching and effacing protein, pathogenesis factor TERM 2411 1824443 - 1824427 - G 76 -12.3 -2.60392 | opp_overlap 1824435, overlap 1824426 1824429 GATGTTGTAACCAAC CACCTGC TCA GCAGGTG CTGCGGTTAATACAG TERM 2412 1825177 - 1825166 - G 72 -4.4 -4.64676 | opp_overlap 1825166 TTACGTTCAACAAAA TCGT AGCG ACGA TTCTGTACCTCTCGC EFER_1772 1826548 - 1826363 - | hypothetical protein ycgN 1827061 - 1826615 - | hypothetical protein ycgM 1827823 - 1827164 - | putative isomerase/hydrolase ycgL 1828167 - 1827874 - | hypothetical protein minC 1828277 - 1828999 + | cell division inhibitor minD 1829023 - 1829835 + | membrane ATPase of the MinC-MinD-MinE system minE 1829839 - 1830105 + | cell division topological specificity factor TERM 2413 1830133 - 1830149 + T 100 -8 -5.64274 | opp_overlap 1830132 1830133, overlap 1830121 ATATTCTCAAAGAAG GGCAGA TTATT TCTGCC TTTTTTTGTGACTCA TERM 2414 1830220 - 1830202 - T 100 -11 -5.4833 | TCAGCCAATAAAAAA CCCAGACA AAA TGCCTGGG CCTTAAAATTTGGAC EFER_1779 1831085 - 1830477 - | putative ATPase component of ABC-type transport system TERM 2415 1831016 - 1831002 - G 72 -6.4 -4.4078 | CGGTCTTAAGGAAAA TGACAG ATT CTGCCA AAGGACTTTCTCCCC EFER_1780 1831851 - 1831078 - | putative ATPase component of ABC-type transport system TERM 2416 1831288 - 1831334 + g 100 -13.3 -3.72893 | opp_overlap 1831280 1831279 GCACAAGTCCTGCAA TTGTTGCATGAGCT-GATGCGCC AGT GGTGCATCCAGC-CATGCAGTAA TTTCATCAGCCAGTA EFER_1781 1832675 - 1831845 - | putative inner membrane transport protein TERM 2417 1831966 - 1831943 - GR 71 -2.4 -4.96388 | gap 1, overlap 1831944 AACCAGGAAATAAAA CCAGCCACCAG TTA CCG-TAGCTGA TAAAACGCAATGCAT EFER_1782 1833636 - 1832647 - | putative inner membrane nickel transport protein TERM 2418 1832738 - 1832724 - GR 71 -2.8 -4.83615 | overlap 1832725 TATTCCCCACAAAAA CCAGCA ACG TGCTAA AGAGTACAATGCCCA EFER_1783 1835207 - 1833621 - | putative substrate-binding transport protein TERM 2419 1834582 - 1834593 + g 79 -2.2 -5.27335 | AAAACAAATACCAGT CGAT TAAA GTCG TTTTTCTTTCCGGCA TERM 2420 1835360 - 1835305 - R 86 -12.2 -3.02181 | gap 1, opp_overlap 1835305, overlap 1835307 1835309 1835319 CAATAGAAAATATGA CACAGGACAGAAAAGTATGATCATTTT ATA AAAACG-TCATACCCTTCTGTCTGGTG TTTTCATCGACACTC TERM 2421 1835305 - 1835360 + r 79 -7.8 -4.2558 | gap 1, opp_overlap 1835305 1835307 1835309 1835319 CAATAGAAAATATGA CACAGGACAGAAAAGTATGATCATTTT ATA AAAACG-TCATACCCTTCTGTCTGGTG TTTTCATCGACACTC TERM 2422 1835357 - 1835307 - R 79 -10.9 -3.04575 | gap 2, opp_overlap 1835305, overlap 1835305 1835309 1835319 ATAGAAAATATGACA CAGGACAGAAAAGTATGATCATTTT ATA AAAACG-TCATACCCTTCTGTC-TG GTGTTTTCATCGACA TERM 2423 1835356 - 1835309 - R 76 -10.2 -3.0641 | gap 1, opp_overlap 1835305, overlap 1835307 1835305 1835319 AGAAAATATGACACA GGACAGAAAAGTATGATCATTTT ATA AAAACG-TCATACCCTTCTGTCT GGTGTTTTCATCGAC TERM 2424 1835346 - 1835319 - R 75 -5.8 -4.60143 | gap 1, opp_overlap 1835305, overlap 1835309 1835307 1835305 ACACAGGACAGAAAA GTATGATCATTTT ATA AAAACG-TCATAC CCTTCTGTCTGGTGT ymgF 1835601 - 1835341 - | conserved hypothetical protein; putative exported protein TERM 2425 1835519 - 1835505 - G 78 -5.7 -4.86731 | GGGCGCCAAATAAAA TCACC AGAAA GGTGA GGATAATAAAGAATG TERM 2426 1835726 - 1835762 + r 95 -12.3 -3.33261 | overlap 1835727 AATATTTGATCAGCG ACTTGTGCCGTGGTGTA TTT TTCACCACGGCACAACC TTCTACAGGTTAGAA TERM 2427 1835727 - 1835761 + r 100 -15.8 -2.59742 | overlap 1835726 ATATTTGATCAGCGA CTTGTGCCGTGGTGTA TTT TTCACCACGGCACAAC CTTCTACAGGTTAGA EFER_1785 1838510 - 1835772 - | conserved hypothetical protein; putative exported protein TERM 2428 1838842 - 1838866 + r 78 -10 -3.46906 | opp_overlap 1838840 1838844, overlap 1838838 1838844 AGAGCTCTGAAAAGT AACCTGCCGA ATTTC TCGGCAGGTA TTACTGTATTTTAAT TERM 2429 1838864 - 1838844 - R 100 -13.3 -3.67175 | opp_overlap 1838842 1838838 1838844, overlap 1838840 AGCTCTGAAAAGTAA CCTGCCGAA TTT CTCGGCAGG TATTACTGTATTTTA TERM 2430 1838844 - 1838864 + r 95 -12.6 -3.29269 | opp_overlap 1838844 1838840, overlap 1838842 1838838 AGCTCTGAAAAGTAA CCTGCCGA ATTTC TCGGCAGG TATTACTGTATTTTA EFER_1786 1840199 - 1838898 - | putative Thermostable carboxypeptidase 1 TERM 2431 1839076 - 1839064 - G 81 -6.3 -4.82901 | TTTTGGGCATAAAAA CTGAA GTC TTCAG ATGCGCCAGGATTCC TERM 2432 1839911 - 1839924 + g 71 -3.1 -4.8543 | overlap 1839907 CAAGCTCACTACGCA GAGCA ACTG TGTTC TTTTTATCAGGGTTA ycgK 1840567 - 1840968 + | conserved hypothetical protein; putative exported protein TERM 2433 1840997 - 1840976 - T 86 -10.1 -3.96542 | opp_overlap 1840977, overlap 1840971 1840977 TCAAATAAATCGAAA CTGACGGGG ACAG CCCCGTCAT TATTTCTGCTAACTT TERM 2434 1840977 - 1840996 + T 100 -13.6 -4.11585 | opp_overlap 1840971 1840976 1840977 CAAATAAATCGAAAC TGACGGGG ACAG CCCCGTCA TTATTTCTGCTAACT TERM 2435 1840996 - 1840977 - T 100 -13.6 -2.96841 | opp_overlap 1840977, overlap 1840971 1840976 CAAATAAATCGAAAC TGACGGGG ACAG CCCCGTCA TTATTTCTGCTAACT yeeN 1841780 - 1841064 - | hypothetical protein TERM 2436 1842086 - 1842107 + H 70 -7.5 -3.75686 | opp_overlap 1842081 1842084 1842091, overlap 1842081 CTTAATCAACTGATA TTTAATGAT AAGT ATCATTAAA TTGTCCTTTTATTAG EFER_1789 1842244 - 1842534 + | hypothetical protein TERM 2437 1842951 - 1842978 + G 100 -8.3 -5.4251 | opp_overlap 1842959 ATGAAAACACGTTTC GCCACAGACCG CTGACA CGGGCGGTGGC TTTTTTGTGTATCGC TERM 2438 1843007 - 1843035 + G 81 -10.9 -3.57144 | overlap 1843008 GCCACCCAGGTGGCC TTTCCGGTGGCGG CGA CAGCCACCGGGAC TTTCCGGGTGACAGC TERM 2439 1843008 - 1843034 + G 90 -14.4 -2.74144 | overlap 1843007 CCACCCAGGTGGCCT TTCCGGTGGCGG CGA CAGCCACCGGGA CTTTCCGGGTGACAG TERM 2440 1844481 - 1844460 - g 70 -5.7 -4.3586 | overlap 1844462 1844475 TCACGGAGACGAAAA CCCCCGGTG AATA CACCGCCGG GCTGAAAGGCAGCAT EFER_1790 1842932 - 1846201 + | putative adhesin yeeJ (fragment) TERM 2441 1846230 - 1846268 + F 86 -11.8 -3.03741 | opp_overlap 1846230 1846231, overlap 1846224 1846234 TAGCTGAGGATAAAA TGTAGGACTGAGGAACAG TAC TTGTTACTCAGCCCTACG TATATAGTTGTACAT TERM 2442 1846268 - 1846230 - f 100 -11.1 -4.46926 | opp_overlap 1846224 1846230 1846234, overlap 1846231 TAGCTGAGGATAAAA TGTAGGACTGAGGAACA GTACT TGTTACTCAGCCCTACG TATATAGTTGTACAT TERM 2443 1846267 - 1846231 - f 100 -14.6 -3.27674 | opp_overlap 1846230 1846224 1846234, overlap 1846230 AGCTGAGGATAAAAT GTAGGACTGAGGAACA GTACT TGTTACTCAGCCCTAC GTATATAGTTGTACA TERM 2444 1846575 - 1846585 + G 77 -3.2 -5.14563 | overlap 1846570 TCACCACACCCTTTT GGGA AAG TTCC TTTTTTGATAGACGA EFER_1791 1846554 - 1847036 + | putative Glutathione S-transferase EFER_1792 1848201 - 1847374 - | conserved hypothetical protein; putative epimerase, PhzC/PhzF homolog TERM 2445 1848699 - 1848678 - R 72 -6.5 -4.39002 | opp_overlap 1848677 AAATGTGGCATAAAA TGGGAGCAA GGAA CTGCGCCCA CATTTCATGAGCAGC TERM 2446 1848945 - 1848921 - R 100 -10 -4.49981 | opp_overlap 1848924, overlap 1848924 TACATCATCATAAAA CAACGGGCGT GTTAT ACGCCCGTTT CAATATTTAACACAT TERM 2447 1848942 - 1848924 - R 100 -11.7 -4.35644 | opp_overlap 1848924, overlap 1848921 ATCATCATAAAACAA CGGGCGT GTTAT ACGCCCG TTTCAATATTTAACA TERM 2448 1848924 - 1848942 + r 100 -12.4 -3.81137 | opp_overlap 1848924 1848921 ATCATCATAAAACAA CGGGCGTG TTA TACGCCCG TTTCAATATTTAACA icd 1850218 - 1848968 - | isocitrate dehydrogenase, specific for NADP+; e14 prophage TERM 2449 1850442 - 1850430 - g 77 -2.7 -5.11613 | overlap 1850431 ATACCATGCAAAAAA CTTCT TTT AGAAA TCACCAGGTTAAGCG ymfC 1850390 - 1851043 + | 23S rRNA pseudouridine synthase ymfB 1851053 - 1851514 + | bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase TERM 2450 1851658 - 1851672 + G 72 -7.8 -3.86346 | opp_overlap 1851660 CAACAACAGGGATAT CAGGTC GAA GGCCTG TTTATGAAGAACTGG trmU 1851568 - 1852674 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2451 1852850 - 1852869 + G 72 -5.7 -4.56597 | gap 1, opp_overlap 1852850, overlap 1852850 TATTATCGATATGAA CC-CCAGC TCCAC GCTGGCGG TTTTTGGCGGCAGCG hflD 1852710 - 1853351 + | putative inner membrane protein; lambda lysogenization regulator, UPF0274 family purB 1853355 - 1854725 + | adenylosuccinate lyase TERM 2452 1854734 - 1854765 + F 78 -9.4 -3.63694 | gap 1, opp_overlap 1854734 1854735 1854737, overlap 1854735 1854738 GAAATAAGCCTTAAA TCAGTGCCGGATGGC GAT GCTGTCCGGC-CTGC TTATTAAAAATCCAT TERM 2453 1854735 - 1854764 + F 91 -12.9 -2.77895 | gap 1, opp_overlap 1854735 1854734 1854737, overlap 1854734 1854738 AAATAAGCCTTAAAT CAGTGCCGGATGGC GAT GCTGTCCGGC-CTG CTTATTAAAAATCCA TERM 2454 1854738 - 1854762 + F 73 -9.9 -2.93549 | opp_overlap 1854737 1854735 1854734, overlap 1854735 1854734 TAAGCCTTAAATCAG TGCCGGATGGC GAT GCTGTCCGGCC TGCTTATTAAAAATC TERM 2455 1854770 - 1854786 + F 71 -2.4 -5.22039 | GTCCGGCCTGCTTAT TAAAAA TCCAT TTTTTA TTTTTTCACTTTACC phoP 1854891 - 1855562 + | DNA-binding response regulator in two-component regulatory system with PhoQ TERM 2456 1855590 - 1855608 + G 74 -2.2 -5.14563 | overlap 1855594 TGCGTCATATTTTTC CCCTGTCG TTA CGGCTGCG TTTTTTGCTGGCAAC phoQ 1855562 - 1857022 + | sensory histidine kinase in two-compoent regulatory system with PhoP ycfD 1857112 - 1858233 + | hypothetical protein TERM 2457 1858267 - 1858239 - T 95 -7.5 -5.47399 | opp_overlap 1858237 1858235 1858239 CGAAGGGTAAAAAAA TGCCTGAGC ATCTTTACTGG GCTCAGGCA TATCTTATCTCCAGT yeaE 1859181 - 1858282 - | putative oxidoreductase TERM 2458 1859190 - 1859174 - G 85 -10.1 -4.2803 | opp_overlap 1859174 CACCGTAATGCAAAA CAGGGCA TGA CGCCCTG TTTTTATGCATAAAA TERM 2459 1859174 - 1859190 + g 95 -9.4 -4.87665 | opp_overlap 1859174 CACCGTAATGCAAAA CAGGGC ATGAC GCCCTG TTTTTATGCATAAAA mipA 1859972 - 1859226 - | scaffolding protein for murein synthesizing machinery yeaG 1860408 - 1862342 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 2460 1862375 - 1862349 - f 71 -9.4 -2.93073 | overlap 1862346 TCGTCTTAACAACCA TGGCCCGGTA CGCATGC TACCGGGCCT ACAACGACAGCGAAC yeaH 1862455 - 1863738 + | hypothetical protein TERM 2461 1863775 - 1863746 - f 86 -11.5 -3.30212 | opp_overlap 1863743 1863742 1863741 1863747, overlap 1863747 AAGATTAATGACTAA TTTCAGCCAGCAA TTGA TCGCTGGCTGAAT CATTAGCTTTTATGT TERM 2462 1863747 - 1863774 + F 91 -12.8 -2.85657 | opp_overlap 1863747 1863746, overlap 1863743 1863742 1863741 AGATTAATGACTAAT TTCAGCCAGCAA TTGA TCGCTGGCTGAA TCATTAGCTTTTATG TERM 2463 1863774 - 1863747 - f 100 -15 -2.57404 | opp_overlap 1863743 1863742 1863741 1863747, overlap 1863746 AGATTAATGACTAAT TTCAGCCAGCAA TTGA TCGCTGGCTGAA TCATTAGCTTTTATG TERM 2464 1864241 - 1864265 + G 75 -5.7 -4.68424 | overlap 1864243 CAATAAGGATATTCT TCCCACGCTTA TCT TAAGCCTGGCA TTTTTAAGTGGATTA TERM 2465 1864480 - 1864496 + G 74 -2.9 -4.88228 | AATTTTACATTCTGC TGGTAGC GAT GGTGCCA TTTTTAGTCTTCCCT TERM 2466 1864626 - 1864637 + G 95 -5.8 -5.34208 | ACCAAAATTTTAGTA TGCC TGTG GGCA TTTTTACTTTTTTTT TERM 2467 1864898 - 1864909 + G 91 -3 -5.52986 | ATTAACAAATATTTA TAAC CGTC GTTA TTTTTTTAATAAACT yeaI 1864017 - 1865363 + | Inner membrane protein yeaI TERM 2468 1865371 - 1865411 + F 100 -10.6 -5.252 | opp_overlap 1865371 1865382, overlap 1865379 GGATATAAATGAGAA TTTATTCACAACCACGTC ATAAC GACGTGGTTGTTGATACA TTTTTTATCAAACTA TERM 2469 1865411 - 1865371 - f 75 -9.1 -3.67102 | opp_overlap 1865371 1865379, overlap 1865382 GGATATAAATGAGAA TTTATTCACAACCACGTCA TAA CGACGTGGTTGTTGATACA TTTTTTATCAAACTA TERM 2470 1865379 - 1865403 + F 100 -14.4 -3.3158 | opp_overlap 1865371 1865382, overlap 1865371 ATGAGAATTTATTCA CAACCACGTC ATAAC GACGTGGTTG TTGATACATTTTTTA TERM 2471 1865400 - 1865382 - f 81 -11 -3.38118 | opp_overlap 1865379 1865371, overlap 1865371 AGAATTTATTCACAA CCACGTCA TAA CGACGTGG TTGTTGATACATTTT TERM 2472 1865795 - 1865822 + G 77 -9.9 -3.63627 | opp_overlap 1865791 CAAAAACAGGATATT TGCCGTTCCTG GGAAAG CATGAACGGCA TTTACGGTATGAACC yeaJ 1865534 - 1867036 + | hypothetical protein TERM 2473 1867159 - 1867142 - g 71 -2.6 -4.96848 | overlap 1867144 TTGCTGACACAAAAA GACGCG CAATAC CGCGTG GTCAGCCATGAAGCA yeaK 1867079 - 1867630 + | hypothetical protein yeaL 1867899 - 1868345 + | conserved hypothetical protein; putative inner membrane protein TERM 2474 1868546 - 1868556 + G 72 -8.2 -3.72695 | overlap 1868552 CGCGTAACGTTTACT GGCG CAG CGCC TTTACTGGAGGCGAT yeaN 1868453 - 1869640 + | putative transporter; MFS superfamily TERM 2475 1869956 - 1869929 - g 74 -9.9 -3.50737 | overlap 1869925 1869948 1869949 AGCCATAAAGACGAA GGCGAACGACT GGCCAA AATCGCTCGCC AGCAAACGTTAACCT TERM 2476 1870022 - 1869991 - g 93 -10.2 -4.57569 | opp_overlap 1869990, overlap 1869993 CTACTCCGCCAAAAA TAGCCAGCAGAATC ATGC GATTGTGCTGGCTC AATGGTTACGTACTC TERM 2477 1870020 - 1869993 - g 93 -12.8 -3.90316 | opp_overlap 1869990, overlap 1869991 ACTCCGCCAAAAATA GCCAGCAGAATC ATGC GATTGTGCTGGC TCAATGGTTACGTAC yeaO 1869695 - 1870042 + | hypothetical protein yoaF 1870318 - 1870061 - | conserved hypothetical protein; putative exported protein TERM 2478 1870484 - 1870470 - H 75 -8.6 -3.75169 | opp_overlap 1870460 TATCATGTCAGCAAA GCTGAA ATT TTCAGC ACAATCTTTGGCACC yeaP 1870514 - 1871554 + | hypothetical protein TERM 2479 1871774 - 1871806 + T 93 -10 -4.26305 | opp_overlap 1871782, overlap 1871782 GATCATCCCTGTTTT CTGAAAAAGGCTAC ACCTG GTAGCCTTTTTTCG TTTCTGTTAGCTTTT TERM 2480 1871798 - 1871782 - T 82 -8 -4.56597 | opp_overlap 1871782 1871774 CTGTTTTCTGAAAAA GGCTAC ACCTG GTAGCC TTTTTTCGTTTCTGT TERM 2481 1871782 - 1871798 + T 100 -8 -5.4387 | opp_overlap 1871782, overlap 1871774 CTGTTTTCTGAAAAA GGCTAC ACCTG GTAGCC TTTTTTCGTTTCTGT yeaQ 1872061 - 1871813 - | conserved hypothetical protein; putative inner membrane protein TERM 2482 1872184 - 1872206 + r 86 -9.1 -4.37092 | opp_overlap 1872183 TGTTTTACGAATGAT GGATGACGG AACAA CCGCCATCC TTTTCTAACGGAGAT yeaS 1872919 - 1872227 - | putative neutral amino-acid efflux system TERM 2483 1872904 - 1872887 - G 71 -2.6 -5.00616 | CTCTTCCTGAAAAAA CCATGC GTAACT GCAGGG CGATATGCTAACCAA TERM 2484 1873045 - 1873019 - R 100 -10.1 -5.54894 | AAGGGATGAAAAAAA GCCCCTCAGCC TGAGC GAATGAGGGGC CAAATTGCAGAGTAC ycfJ 1873607 - 1873068 - | hypothetical protein TERM 2485 1873728 - 1873776 + r 74 -9.7 -3.2048 | gap 1, opp_overlap 1873733, overlap 1873729 TTGAGATTCTTCTCA AGTGATGAGTCAGACGGTGATG CAGACT CATCACCGTCTGAC-CAGCAGA TTAATGAAGTTTAAG TERM 2486 1873729 - 1873775 + r 90 -13.2 -2.51966 | gap 1, opp_overlap 1873733, overlap 1873728 TGAGATTCTTCTCAA GTGATGAGTCAGACGGTGATG CAGACT CATCACCGTCTGAC-CAGCAG ATTAATGAAGTTTAA TERM 2487 1873771 - 1873733 - R 100 -17 -2.52543 | gap 1, opp_overlap 1873729 1873728 ATTCTTCTCAAGTGA TGAGTCAGACGGTGATG CAGACT CATCACCGTCTGAC-CA GCAGATTAATGAAGT ndh 1875081 - 1873777 - | respiratory NADH dehydrogenase 2/cupric reductase TERM 2488 1874970 - 1874982 + g 85 -3.3 -5.4505 | opp_overlap 1874970 GGTTTCTGTCAACAA GCGTA ACT TTCGC TTTTTTCTTGCGCCC TERM 2489 1875152 - 1875105 - R 100 -13.8 -3.37533 | opp_overlap 1875109 1875121, overlap 1875109 CCTTAAAATGATTAA CCAATTGTTAACTAAAGGTTAT TAAA ATAGCCTTTAATTAACAATAGG TTACGCTAATGAAAA TERM 2490 1875109 - 1875148 + r 81 -11.8 -2.54193 | opp_overlap 1875105 1875109, overlap 1875121 AAAATGATTAACCAA TTGTTAACTAAAGGTTAT TAAA ATAGCCTTTAATTAACAA TAGGTTACGCTAATG TERM 2491 1875148 - 1875109 - R 91 -11.8 -3.44825 | opp_overlap 1875109 1875121, overlap 1875105 AAAATGATTAACCAA TTGTTAACTAAAGGTTAT TAAA ATAGCCTTTAATTAACAA TAGGTTACGCTAATG TERM 2492 1875281 - 1875296 + r 75 -9 -3.73072 | opp_overlap 1875281 GTTAGATCAAAAAAA CCAGTC CGAA GACTGG TTTCATAGCAACATT TERM 2493 1875296 - 1875281 - R 100 -9 -5.58454 | opp_overlap 1875281 GTTAGATCAAAAAAA CCAGTC CGAA GACTGG TTTCATAGCAACATT ycfP 1875864 - 1875322 - | hypothetical protein nagZ 1876913 - 1875888 - | beta N-acetyl-glucosaminidase TERM 2494 1876019 - 1876009 - G 70 -6.8 -4.08706 | CCTTTATGATACAAA CGTG TAA CACG TGGCGCATTGATCGG thiK 1877747 - 1876935 - | thiamine kinase TERM 2495 1877718 - 1877697 - G 76 -10.9 -3.35224 | gap 1, opp_overlap 1877713, overlap 1877695 ATATTGCGGGAAATA GCGCGAC-AG TAT CTCGTCGCGC GTTAGCGAATTATTG ycfM 1878369 - 1877728 - | putative outer membrane lipoprotein ycfL 1878757 - 1878383 - | hypothetical protein hinT 1879119 - 1878760 - | purine nucleoside phosphoramidase TERM 2496 1879430 - 1879413 - R 100 -12.7 -5.32699 | opp_overlap 1879413 TCAAATATTAAAAAA GGCAGCC ATTC GGCTGCC TTAGTCTCCCCAACG TERM 2497 1879413 - 1879430 + r 95 -12.7 -3.25823 | opp_overlap 1879413 TCAAATATTAAAAAA GGCAGCC ATTC GGCTGCC TTAGTCTCCCCAACG ptsG 1880888 - 1879455 - | fused glucose-specific PTS enzymes: IIBcomponent ; IIC component TERM 2498 1880044 - 1880061 + g 70 -4 -4.62168 | opp_overlap 1880044 GCGGAGATCATGATA CCGCCC ACTTTC GCGCGG TTTTCTGGTTTAGCT ycfH 1881979 - 1881182 - | putative metallodependent hydrolase holB 1882994 - 1881990 - | DNA polymerase III, delta' subunit TERM 2499 1882938 - 1882955 + g 70 -4.1 -4.61231 | overlap 1882952 GTGACCCCTTCCTGC CTGATAG TTCG CTACCAG TTTTTCGAAGTCTGG tmk 1883632 - 1882991 - | thymidylate kinase yceG 1884644 - 1883622 - | putative conserved membrane associated protein pabC 1885456 - 1884641 - | Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) (ADC lyase) (ADCL) TERM 2500 1885549 - 1885534 - R 100 -8.2 -5.25893 | opp_overlap 1885534 ATATACATGAAAAAA GGCCCG CAAG CGGACC TTTAATAGAAGAGTG fabF 1886815 - 1885574 - | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 2501 1886868 - 1886896 + r 72 -9.6 -3.15056 | gap 1, opp_overlap 1886869 1886871, overlap 1886866 GGGACAAAAGAAAAA ACT-CAGGCGGTC GAAT GACCGCCTGGAGA TGTTCACTTACGCCT TERM 2502 1886895 - 1886869 - R 100 -13.1 -5.86976 | gap 1, opp_overlap 1886868 1886866, overlap 1886871 GGACAAAAGAAAAAA CT-CAGGCGGTC GAAT GACCGCCTGGAG ATGTTCACTTACGCC TERM 2503 1886892 - 1886871 - R 100 -15.9 -3.03407 | opp_overlap 1886868 1886866, overlap 1886869 ACAAAAGAAAAAACT CAGGCGGTC GAAT GACCGCCTG GAGATGTTCACTTAC acpP 1887140 - 1886904 - | acyl carrier protein (ACP) fabG 1888150 - 1887416 - | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 2504 1887755 - 1887767 + g 71 -3.3 -4.77036 | opp_overlap 1887756, overlap 1887756 ACCAATAGTGATAAT ACGTC CAT GACGC TTTTTCATCATAGCG fabD 1889091 - 1888162 - | malonyl-CoA-[acyl-carrier-protein] transacylase fabH 1890060 - 1889107 - | 3-oxoacyl-[acyl-carrier-protein] synthase III plsX 1891212 - 1890136 - | fatty acid/phospholipid synthesis protein TERM 2505 1890375 - 1890386 + g 93 -5.8 -5.24129 | TGAGGTGACTGAATC GCCT CGTC AGGC TTTTTTGTAGCCAAC TERM 2506 1891155 - 1891128 - G 73 -12 -2.70298 | overlap 1891127 1891131 GTTGCGAATTAGAAT TCAGTGCCTGCA AAGC CGCAGGCACTGT CACGGAGGGGCCGAA TERM 2507 1891152 - 1891131 - G 76 -12.3 -2.63347 | overlap 1891128 1891127 GCGAATTAGAATTCA GTGCCTGCA AAGC CGCAGGCAC TGTCACGGAGGGGCC rpmF 1891466 - 1891293 - | 50S ribosomal subunit protein L32 yceD 1892039 - 1891518 - | hypothetical protein TERM 2508 1892107 - 1892079 - H 82 -10.3 -3.70902 | opp_overlap 1892085, overlap 1892085 CGTCGTATAGTCAAA GAAAAAGGCAGCC TGC GGTTGCCTTTTGC CAATAATTCGCACAC TERM 2509 1892101 - 1892085 - H 100 -7.9 -5.31519 | opp_overlap 1892085, overlap 1892079 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC TERM 2510 1892085 - 1892101 + H 88 -10.1 -4.12902 | opp_overlap 1892085 1892079 ATAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC yceF 1892198 - 1892821 + | hypothetical protein TERM 2511 1892865 - 1892836 - T 100 -15.7 -3.30338 | opp_overlap 1892829 1892847, overlap 1892825 1892845 1892846 ACAACTGCCCGATAA GCCGGATAAGGCG TTTA CGCCGCATCCGGC AATCGATGTTGACTG rluC 1893925 - 1892930 - | 23S rRNA pseudouridylate synthase TERM 2512 1895059 - 1895045 - g 82 -3.4 -5.18357 | GAAGCCATCAAAAAA GCTGCC GAA AGCCGC CCTGCTCCGTTCCTG TERM 2513 1896157 - 1896171 + G 74 -6.4 -4.5123 | TACACCTGCTCAACC CGGTTT ATT AAGCCG TTTCTTTGCTGCATT TERM 2514 1897533 - 1897546 + G 73 -3.8 -4.86385 | CGCGTCATAGCGACT GGCA ACGTCC TGCC TTTGTTTTTGAAGGT rne 1894457 - 1897636 + | fused ribonucleaseE: endoribonuclease ; RNA-binding protein ;RNA degradosome binding protein TERM 2515 1897655 - 1897672 + T 100 -14.1 -5.4833 | ATTTATCTGTTGTAA GCCGGCC GTTT GGCCGGC TTTTTTATTACGTAC TERM 2516 1897742 - 1897713 - T 100 -16.5 -5.95946 | GCAAGAATAAAAAAA TGCCTGTCGCGGT ATTC ACCGGGACAGGCA GAAAAACATATCCAG flgL 1898737 - 1897784 - | flagellar hook-filament junction protein TERM 2517 1898545 - 1898558 + g 72 -6.7 -4.18908 | TTGCAAACGTTCTTG CCAGT GCAT ACTGG TTGTTTTGCGCCTGT flgK 1900399 - 1898753 - | flagellar hook-filament junction protein 1 flgJ 1901406 - 1900465 - | muramidase TERM 2518 1900635 - 1900647 + g 70 -10.5 -2.79492 | overlap 1900634 TCGCTTTCGTGACTG CCGCG TAA CGCGG ATTTCGCGTTAAAAG flgI 1902503 - 1901406 - | flagellar basal body P-ring protein flgH 1903213 - 1902515 - | flagellar protein of basal-body outer-membrane L ring TERM 2519 1903239 - 1903258 + r 76 -9.2 -3.42621 | opp_overlap 1903238 1903239 TTCAAAATCAGTAAC CCGGTGAG AATC CCCACCGG TTATGCCTTAGAGTT TERM 2520 1903258 - 1903239 - R 80 -11.4 -2.62038 | opp_overlap 1903239, overlap 1903238 TTCAAAATCAGTAAC CCGGTGAG AATC CCCACCGG TTATGCCTTAGAGTT flgG 1904048 - 1903266 - | flagellar component of cell-distal portion of basal-body rod flgF 1904955 - 1904200 - | flagellar component of cell-proximal portion of basal-body rod flgE 1906180 - 1904975 - | flagellar hook protein TERM 2521 1905249 - 1905261 + g 70 -5.5 -4.32951 | opp_overlap 1905245 1905244, overlap 1905245 GCCAGTACAATCTGC CCCAG CAG TTGGG TTTGTTCGTTGGAAT flgD 1906900 - 1906205 - | flagellar hook assembly protein TERM 2522 1906717 - 1906736 + g 91 -12.2 -3.8211 | CGGTACTGATTTGTG CGAGCTGA GAAG TCAGCTCG TTATTCTCCATGGGA flgC 1907316 - 1906912 - | flagellar component of cell-proximal portion of basal-body rod flgB 1907811 - 1907320 - | flagellar component of cell-proximal portion of basal-body rod flgA 1907842 - 1908552 + | Flagella basal body P-ring formation protein flgA precursor flgM 1908643 - 1908936 + | Negative regulator of flagellin synthesis (Anti-sigma-28 factor) flgN 1908941 - 1909363 + | Flagella synthesis protein flgN TERM 2523 1909372 - 1909395 + T 100 -15.4 -5.69473 | opp_overlap 1909372 AGTTTAAGCAGTGAA TGGAGTTGCC CGAG GGCAACTCCA TTTTTTTATACTGTG TERM 2524 1909395 - 1909372 - T 100 -15.4 -3.13343 | opp_overlap 1909372 AGTTTAAGCAGTGAA TGGAGTTGCC CGAG GGCAACTCCA TTTTTTTATACTGTG mviN 1910978 - 1909401 - | conserved hypothetical protein; putative inner membrane protein TERM 2525 1910013 - 1909996 - G 72 -4.7 -4.66938 | opp_overlap 1909996, overlap 1909998 AGTGCCAACAGAAAA CAGAGGC GCAA GCCCCAG TCCATTAAGCGGTTG TERM 2526 1910105 - 1910083 - G 74 -8.4 -3.94438 | overlap 1910081 GATGGCAACAAAATA GTGCCAAGTG CTA CACCCAGCAC ACCGGAAGGAAACTC TERM 2527 1910708 - 1910694 - G 73 -3.5 -4.76087 | GATATAAGAAACAAA GACGC GCGAG GCATC TTCCCCCTGCTTGCT TERM 2528 1910986 - 1910970 - G 100 -13.7 -4.18494 | overlap 1910955 GACCCTGAGGCAAAA CGCCTGC AAG GCAGGCG CTGAAAGAGGCGAAT mviM 1911972 - 1911049 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain yceH 1912648 - 1911974 - | hypothetical protein TERM 2529 1912195 - 1912205 + g 72 -6.8 -4.17657 | overlap 1912190 ACGGACCATCTTCGC GCTG CGC CAGC TTTTCCAGTGTACTG TERM 2530 1912549 - 1912564 + g 90 -9 -4.56597 | ACAGTGGGTATTGCT CAGGTG TAGT CACCTG TTTTTCCAGCAGGCA rimJ 1913244 - 1912630 - | ribosomal-protein-S5-alanine N-acetyltransferase TERM 2531 1913622 - 1913641 + G 70 -4.2 -4.59773 | overlap 1913624 CGGCTTGCGTCAGTT TATCCAGC AAGG GCTGGGCA TTTTTGGCGGTGCAA TERM 2532 1913746 - 1913760 + G 70 -4.2 -4.59591 | overlap 1913739 GGTATTGCCCATGAA CCATGG TTA CTGTGG TTTTCCTGTTTTCTT TERM 2533 1913949 - 1913965 + G 93 -8.7 -4.82756 | CGATTTTCGTCTGGT TTGCGCT ACA GGCGCAA TTTTGTTCGTTATGT mdtH 1913380 - 1914666 + | putative metabolite efflux permease yceB 1914811 - 1915371 + | putative lipoprotein TERM 2534 1915379 - 1915393 + F 100 -12.8 -4.91852 | opp_overlap 1915373 1915376 CTGATTAACCCATGA GGGCGC ATG GCGCCC TTTATTTTTCGTGCA TERM 2535 1915931 - 1915943 + G 78 -9.1 -3.86015 | TATCGATATTTTTGA TCGCG AAG CGCGA TTTATCGACACCGTA pyrC 1915476 - 1916522 + | dihydro-orotase dinI 1916538 - 1916840 + | DNA damage-inducible protein I TERM 2536 1916858 - 1916873 + F 100 -11.8 -6.20267 | TGCAGTAAAACTTTT GCCGGG TCGC CCCGGC TTTTTTTATTTTTAA TERM 2537 1917154 - 1917143 - g 71 -3 -4.8236 | GATGGAAAAAAATAA TGAA GTCA TTCA GACTCATCCGCTTGT bssS 1917129 - 1917383 + | biofilm regulator TERM 2538 1917409 - 1917425 + F 100 -9.4 -5.42198 | opp_overlap 1917409 CCAACCACTATCAAA GGCACC GTTCA GGTGCC TTTTCTTTTTTGCAG TERM 2539 1917425 - 1917409 - f 81 -9.4 -3.82031 | opp_overlap 1917409 CCAACCACTATCAAA GGCACC GTTCA GGTGCC TTTTCTTTTTTGCAG TERM 2540 1918218 - 1918199 - g 76 -4.2 -4.92756 | overlap 1918201 AGTATTAAAAATAAA TTTCCGGC ATTT ACCGGAGA GCTGCCGAATGGTGA solA 1917500 - 1918615 + | N-methyltryptophan oxidase, FAD-binding yceJ 1918989 - 1919567 + | putative cytochrome b561 TERM 2541 1919668 - 1919651 - g 70 -7 -4.07786 | opp_overlap 1919650 TACAAAATCGATAAA GAAGGC CAGCAT GCCTTC GTCAATTTCCGTATT yceI 1919564 - 1920139 + | polyprenyl-pyrophosphate binding protein TERM 2542 1920155 - 1920180 + T 84 -5.4 -5.29385 | overlap 1920157 CGTGCGTTTCTCCTG AATGGCGAGG GTGTTA TCTCGCCATC TTTTTTCCTTAAATT TERM 2543 1920157 - 1920178 + T 79 -8 -4.26777 | overlap 1920155 TGCGTTTCTCCTGAA TGGCGAGG GTGTTA TCTCGCCA TCTTTTTTCCTTAAA yceA 1921241 - 1920189 - | hypothetical protein lpxL 1921462 - 1922382 + | lauryl-acyl carrier protein (ACP)-dependent acyltransferase TERM 2544 1922429 - 1922399 - f 100 -13.4 -3.53444 | opp_overlap 1922407, overlap 1922400 TCATTTCCTCGTAAA TCGGATAAGATGCA ACC CGCATCTTATCCGG CAACAACCGCTCTGC TERM 2545 1922428 - 1922400 - f 100 -16.9 -2.71924 | opp_overlap 1922407, overlap 1922399 CATTTCCTCGTAAAT CGGATAAGATGCA ACC CGCATCTTATCCG GCAACAACCGCTCTG mdtG 1922565 - 1923791 + | putative metabolite efflux transporter msyB 1923874 - 1924248 + | hypothetical protein yceK 1924476 - 1924249 - | putative lipoprotein TERM 2546 1924499 - 1924517 + r 100 -14.6 -2.89683 | opp_overlap 1924499, overlap 1924501 CTGCTCCGTAAAAAA TACCGGCG TTA CGCCGGTA TATGTCGGATGCGAT TERM 2547 1924517 - 1924499 - R 100 -14.6 -5.00616 | opp_overlap 1924499 1924501 CTGCTCCGTAAAAAA TACCGGCG TTA CGCCGGTA TATGTCGGATGCGAT TERM 2548 1924501 - 1924515 + r 95 -12.8 -3.00022 | opp_overlap 1924499, overlap 1924499 GCTCCGTAAAAAATA CCGGCG TTA CGCCGG TATATGTCGGATGCG TERM 2549 1924594 - 1924618 + r 73 -8.5 -3.70019 | overlap 1924592 GCAGGAAGATTGCAG GCCTGATAAGC ACA GCACATCAGGC TATTTTGCCGTTACT mdoH 1927172 - 1924629 - | glucan biosynthesis: glycosyl transferase TERM 2550 1926595 - 1926584 - G 75 -4.4 -4.83269 | AGAGGACAGCAAAAA GGAT CAGA ATCC CCGTTTGCAACATGT TERM 2551 1927106 - 1927118 + g 72 -4.7 -4.70659 | overlap 1927107 CGCGGATATCAGTTT TCGGC AAT GCCGC TTTTTCGATATCCGA mdoG 1928700 - 1927165 - | glucan biosynthesis protein, periplasmic TERM 2552 1928395 - 1928413 + g 70 -3.8 -4.64861 | overlap 1928394 TTTAATGCGTTTAAC CGTAGTTG CGG TAACTTCG TTTATTTTAACAGGC EFER_1880 1928744 - 1928902 + | hypothetical protein TERM 2553 1929503 - 1929520 + G 100 -2.7 -5.84381 | CAGGGTGGTGTTCAA TGAGTAA GCTA TCACTCA TTTTTTTGTTACTCG TERM 2554 1929547 - 1929562 + G 71 -3.2 -4.74161 | gap 1, overlap 1929547 1929548 CTCGGCATTGGTTAT G-CGGCG ATT CGTCGGC TTATTTTTCTTGTTT mdoC 1928974 - 1930134 + | membrane protein required for modification of periplasmic glucan ymdC 1931632 - 1930142 - | putative hydrolase TERM 2555 1930186 - 1930216 + gT 100 -9.6 -5.40072 | TCGCCAGTTTCACCA GAGCCCGTTTCCAC AAT GTGGTCGCGGGTTC TTTTTTTAGCACAAC TERM 2556 1930336 - 1930353 + gT 90 -11.3 -3.6502 | opp_overlap 1930336 AGCGCTTGTGAATCA GCGAAGC CAAA GCTTCGC TTTCAATGACAAATC TERM 2557 1930353 - 1930336 - GT 80 -11.3 -2.71011 | opp_overlap 1930336 AGCGCTTGTGAATCA GCGAAGC CAAA GCTTCGC TTTCAATGACAAATC TERM 2558 1930913 - 1930948 + gT 81 -11.2 -3.36648 | overlap 1930906 ATAGCGCTGAGCCAT CGGATCGTTTTGCCAG GAGT CTGGTACAACAATCCG TTCTGAGATCTCTTG TERM 2559 1931100 - 1931084 - GT 70 -5.8 -4.20042 | overlap 1931076 ATCAAGATCCGAAAA CAGAGG TTCTT CCCCTG CACCGAAATACGCAT ymdB 1932113 - 1931565 - | hypothetical protein ymdA 1932507 - 1932193 - | hypothetical protein csgC 1932955 - 1932623 - | putative curli production protein csgC precursor TERM 2560 1932818 - 1932828 + g 71 -2.6 -4.9792 | ACCACTTCCCTGGCG TAAT GAC ATTA TTTTTATCTGGCATA TERM 2561 1932971 - 1932996 + r 75 -10.5 -2.8001 | opp_overlap 1932976, overlap 1932976 1932995 TGTATACCCCCGAAA AAAAACAGGGC TTCC GCCCTGTTTTC TGTAATACAGATTAT TERM 2562 1932976 - 1932991 + r 100 -10.4 -4.57353 | opp_overlap 1932976, overlap 1932971 ACCCCCGAAAAAAAA CAGGGC TTCC GCCCTG TTTTCTGTAATACAG TERM 2563 1932991 - 1932976 - R 100 -10.4 -5.75945 | opp_overlap 1932976 1932971 ACCCCCGAAAAAAAA CAGGGC TTCC GCCCTG TTTTCTGTAATACAG csgA 1933473 - 1933015 - | cryptic curlin major subunit csgB 1933990 - 1933514 - | curlin nucleator protein, minor subunit in curli complex TERM 2564 1934145 - 1934156 + H 82 -5.8 -5.02357 | opp_overlap 1934139, overlap 1934139 ACGCATAATCATGCT GCCA GACA TGGC TTTTATTTGCTTATA TERM 2565 1934233 - 1934245 + H 78 -4.1 -5.1675 | overlap 1934230 TATGGCTATTTTCCA TGTCT GCA AGGCA TTTTTTGATGAGTGC TERM 2566 1935018 - 1935028 + GH 74 -3.2 -5.00616 | TGAAAACTGGCCGCA CATC AAT GGTG TTTTTTACGCAGCAG csgD 1934710 - 1935360 + | DNA-binding transcriptional activator in two-component regulatory system csgE 1935230 - 1935754 + | curli production assembly/transport component, 2nd curli operon (modular protein) csgF 1935778 - 1936194 + | putative transport/assembly protein for curli synthesis csgG 1936221 - 1937054 + | putative outer membrane lipoprotein involved in curli production assembly/transport TERM 2567 1937064 - 1937094 + T 100 -18.5 -4.4261 | opp_overlap 1937069, overlap 1937069 TCCTGATGTGATGTA TAAAAGCGTGCGG TTACC CCGCACGCTTTTA TTTTGGTGTTACAGC TERM 2568 1937069 - 1937089 + T 100 -14 -5.17488 | opp_overlap 1937069, overlap 1937064 ATGTGATGTATAAAA GCGTGCGG TTACC CCGCACGC TTTTATTTTGGTGTT TERM 2569 1937089 - 1937069 - T 100 -14 -4.42653 | opp_overlap 1937069 1937064 ATGTGATGTATAAAA GCGTGCGG TTACC CCGCACGC TTTTATTTTGGTGTT ycdZ 1937583 - 1937092 - | conserved hypothetical protein; putative inner membrane protein TERM 2570 1937620 - 1937596 - R 73 -5.7 -4.52047 | CATGATAGCAGAAAA GTGCGCAAC AAATGAG ATCGCGCAC ACATTTTATGCAATG TERM 2571 1937626 - 1937659 + r 86 -11.9 -2.94322 | opp_overlap 1937634, overlap 1937624 GATCGCGCACACATT TTATGCAATGCAACA CTCA TGTTGCATTGCACAG TGATTTAGATCACAT ycdY 1938229 - 1937675 - | hypothetical protein TERM 2572 1938052 - 1938069 + g 87 -4.8 -5.24129 | TATAATCAGCAGCCA GTTGCG TCATAT CGCAGC TTTTTTGTAAACGCG ycdX 1938990 - 1938253 - | putative PHP hydrolase TERM 2573 1939070 - 1939055 - R 73 -8.2 -3.62096 | opp_overlap 1939055 GTTTATTAGTTGAAA CCCGGC TTTC ACCGGG TTGTCATCAGTAGCC ycdW 1940015 - 1939077 - | 2-ketoacid reductase TERM 2574 1940351 - 1940370 + r 100 -5.6 -5.79526 | opp_overlap 1940349 1940351, overlap 1940364 CATATTTAAGAAAGA GCCCGTAC GAAA GTGCGAGC TTTTTTTTCGCATAT TERM 2575 1940440 - 1940428 - R 71 -9.1 -3.28791 | ACCGGGGTTCGACAA CTGGC GCA GCCAG TTGGACAGACCACGA TERM 2576 1940529 - 1940548 + r 100 -10 -5.79526 | opp_overlap 1940527 1940529 CATATTTAAGAAAGA GCTCGTAC GAAA GTGCGAGC TTTTTTTTCGCATAT TERM 2577 1940548 - 1940529 - R 70 -7.8 -3.71378 | opp_overlap 1940529, overlap 1940527 CATATTTAAGAAAGA GCTCGTAC GAAA GTGCGAGC TTTTTTTTCGCATAT TERM 2578 1940758 - 1940735 - R 100 -12.4 -5.93809 | opp_overlap 1940735 1940734 1940731 CTGCTACAAAAAAAA GCCGCTCCAC CAAA GCGAAGCGGC ATTATCTTTTTCTTA lysU 1942307 - 1940790 - | lysine tRNA synthetase, inducible TERM 2579 1941315 - 1941329 + g 70 -3.5 -4.58685 | ATATTTTTTAATTGC CTCGC GCATG GTGAG TTTTTCAAACGGTTT TERM 2580 1941816 - 1941839 + g 78 -9 -3.86346 | gap 1, opp_overlap 1941815 CTGGCGATAACGTAC TTCC-TGGTCT TGC AGACCATGGAA TTTATCCGGCAATGG TERM 2581 1942224 - 1942204 - G 70 -6.8 -4.13304 | AAATCATTTGGAAAA GCTACGCC TTGTT GACGCAGC GCCGCCAGTTTTTCG yjdL 1944033 - 1942576 - | putative transporter TERM 2582 1944078 - 1944057 - R 100 -14.5 -4.68593 | opp_overlap 1944057 CTTACGAGCGAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACTAACTAATT TERM 2583 1944057 - 1944078 + r 100 -14.5 -3.43264 | opp_overlap 1944057 CTTACGAGCGAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACTAACTAATT cadA 1946239 - 1944092 - | lysine decarboxylase 1 TERM 2584 1946303 - 1946259 - R 73 -8.5 -3.65529 | overlap 1946263 ATATCTCCAGGTAAA GAAAGCCCCTCCCAACACATG GGA CAAATGAAAGGAGGCGCTTTC GGAAAATACTTTTAA cadB 1947653 - 1946319 - | putative lysine/cadaverine transporter TERM 2585 1948021 - 1947967 - R 73 -8.9 -3.49789 | gap 1, opp_overlap 1947978, overlap 1947965 1947973 1947978 AATTGATAAAATATA CATGAATTCAACATCAGGCATACCCA TAAC TGAGTATGCCTGATGTTTACTT-ATT CTGAAGCGAGGAAAT TERM 2586 1948016 - 1947973 - R 100 -14.8 -3.41689 | opp_overlap 1947978, overlap 1947967 1947965 1947978 TAAAATATACATGAA TTCAACATCAGGCATACCCA TAAC TGAGTATGCCTGATGTTTAC TTATTCTGAAGCGAG TERM 2587 1948011 - 1947978 - R 100 -19.1 -3.23235 | opp_overlap 1947978, overlap 1947973 1947967 1947965 TATACATGAATTCAA CATCAGGCATACCCA TAAC TGAGTATGCCTGATG TTTACTTATTCTGAA TERM 2588 1947978 - 1948011 + r 100 -16.9 -4.11664 | opp_overlap 1947973 1947967 1947965 1947978 TATACATGAATTCAA CATCAGGCATACCCA TAAC TGAGTATGCCTGATG TTTACTTATTCTGAA cadC 1949546 - 1948017 - | transcriptional activator CadC TERM 2589 1949859 - 1949844 - R 100 -9 -5.83822 | TACAGGCAAAAAAAA CCATCC TGCA GGATGG TCAAATATGCAACAT ycdT 1951277 - 1949886 - | putative diguanylate cyclase, GGDEF protein TERM 2590 1949917 - 1949927 + g 75 -5.4 -4.68209 | overlap 1949912 GGCAGGCGGCCATCT GTCA CGA TGAC TTTATTTCTTCCGGT TERM 2591 1950444 - 1950434 - G 73 -4 -4.77157 | TCAAGGCATGAAAAA TATG ACA CATA AAAATCGACATTACC TERM 2592 1951175 - 1951161 - G 74 -2.8 -5.00616 | overlap 1951162 GGGGTGTTGAAAAAA CCAGCT ATT AGCTAA AATAAAAGCAAAGCC TERM 2593 1952819 - 1952840 + G 74 -2.2 -5.0538 | overlap 1952821 CACCAACCACAAAAA GCTCAGGC CATGAT GTCTGATC TTTTTTACCATCAGG pgaA 1951826 - 1954249 + | biofilm PGA synthesis protein PgaA precursor TERM 2594 1954289 - 1954300 + G 81 -4.4 -5.04325 | overlap 1954289 1954298 AAAGATCTCTCTTTA TGCT GGTA AGCA TTTTTATGCTTTCGG TERM 2595 1955625 - 1955641 + G 74 -3 -4.93877 | gap 1 AGATCTTGCAGGTCA TG-CGTC TTTT GACGGCA TTTTGTTTCATGACG pgaB 1954258 - 1956276 + | putative polysaccharide deacetylase associated with biofilm formation; putative lipoprotein TERM 2596 1956833 - 1956818 - g 73 -11.8 -2.70022 | opp_overlap 1956829, overlap 1956817 CCCATGCTATACAAT CCGCGC GTCG GCGCGG TGACCGGAAACCCGC pgaC 1956269 - 1957594 + | putative glycosyl transferase associated with biofilm formation ycdP 1957596 - 1958009 + | Biofilm PGA synthesis protein pgaD TERM 2597 1958035 - 1958011 - T 100 -13.6 -3.85389 | opp_overlap 1958009 1958024, overlap 1958015 TGGGAAGAATGTAAA CAAAGCCCGG TTCGC CCGGGCTCTG CGCTTATAACACACT TERM 2598 1958031 - 1958015 - T 100 -10.8 -4.52669 | opp_overlap 1958009 1958024, overlap 1958011 AAGAATGTAAACAAA GCCCGG TTCGC CCGGGC TCTGCGCTTATAACA TERM 2599 1958065 - 1958098 + T 93 -13.3 -2.84504 | gap 1, overlap 1958063 1958060 TTAACTGTAGGCATG TAGCGTACGTT-GGCA AAG TGCCGAACGTACGCAA TCCTCTTTACCGAAT phoH 1958973 - 1958050 - | putative phosphate starvation-inducible protein with ATPase activity TERM 2600 1958889 - 1958872 - G 70 -10.5 -2.80816 | opp_overlap 1958871 1958872 TTTGTATTCATCACA CGCGCCG TTGG CAGCGCG ATTATGCGCACGAAC TERM 2601 1958997 - 1958963 - G 70 -3.5 -4.66264 | gap 1, overlap 1958954 1958953 1958965 TAAAATGCCGAAAAA CG-GCTACGCACACCG TTTG CGGCGTCGGTAACACG AGTAAAGAGAGGAAG efeB 1960717 - 1959446 - | heme-binding periplasmic protein involved in iron transport; Tat-dependent exported TERM 2602 1960578 - 1960553 - G 78 -7.5 -4.37092 | ATGTTCGCCATAAAA CGGCTGCGC TTCACTGC GCGCATCCG GTGAAAGCGTCCCCG efeO 1961850 - 1960723 - | ferrous iron transport binding protein efeU 1962747 - 1961908 - | ferrous iron permease TERM 2603 1962219 - 1962202 - G 77 -3.3 -5.08824 | overlap 1962212 GGTCCATTTAAAAAA CGCGCCA AGAT TGAGGCG AATACCGCCCCAGTA TERM 2604 1962347 - 1962334 - G 75 -4.5 -4.77036 | overlap 1962317 1962316 CGCCAGCAGGAAAAA GACCG ACTC CAGTC CTTCCCTTGCAACGG TERM 2605 1962881 - 1962917 + r 100 -12.3 -3.56593 | opp_overlap 1962884 1962885, overlap 1962884 AAATATTTTGAGGAA AAACGCAGAGGGCAATC ACT GATTGCCCTCTGCCTGC TTCTGATTATGGCGT TERM 2606 1962914 - 1962884 - R 100 -18.4 -4.72986 | opp_overlap 1962881 1962884, overlap 1962885 TATTTTGAGGAAAAA CGCAGAGGGCAATC ACT GATTGCCCTCTGCC TGCTTCTGATTATGG TERM 2607 1962884 - 1962914 + r 100 -18.4 -2.90904 | opp_overlap 1962884 1962885, overlap 1962881 TATTTTGAGGAAAAA CGCAGAGGGCAATC ACT GATTGCCCTCTGCC TGCTTCTGATTATGG TERM 2608 1962913 - 1962885 - R 100 -21.9 -3.4331 | opp_overlap 1962884 1962881, overlap 1962884 ATTTTGAGGAAAAAC GCAGAGGGCAATC ACT GATTGCCCTCTGC CTGCTTCTGATTATG putP 1964466 - 1962958 - | proline:sodium symporter TERM 2609 1965195 - 1965211 + G 70 -10.9 -2.82516 | overlap 1965188 GCCTATCGCCGCCCG GAAACCG AAG CGGTTTC TATGCTGCTGGAACA TERM 2610 1965327 - 1965308 - g 100 -3.4 -5.63103 | opp_overlap 1965308 GCGTAATCAAAAAAA TGCCAGTG GTCG CGCAGGCA TGGTTCAGGGATTAT TERM 2611 1966835 - 1966821 - g 75 -5.7 -4.62336 | AGTGCACTGCAAAAA TGGCA GGCCT TGCCA ATGCTGGAACAACCG TERM 2612 1968817 - 1968832 + G 79 -10.4 -3.73775 | opp_overlap 1968808 TGAATACCGCTGCCG CTGGCG GTAA CGCCAG TTTAATGACGATCGG putA 1964889 - 1968851 + | fused DNA-binding transcriptional regulator ; proline dehydrogenase ; pyrroline-5-carboxylate dehydrogenase TERM 2613 1968894 - 1968856 - T 80 -11.6 -2.61144 | opp_overlap 1968870, overlap 1968855 1968853 CGATCGGTTAAACAG GTTGCCGGATGCGACGTG CAA CGCGTCTCATCCGGCATG ATCGGTAGCAACGCT msbB 1969885 - 1968944 - | Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2614 1969694 - 1969709 + g 70 -4.6 -4.56775 | opp_overlap 1969694 AGCCAGATTAATCAA TGCCCG CCGA CGAGCA TTTTTCCCCAACCGT virK 1970867 - 1969962 - | VirK, required for proper localization of IcsA (VirG) at the surface of bacteria (Virulence protein) EFER_1916 1972001 - 1970913 - | Putative Glycosyltransferase similar to rbfU encoded by Plasmid virulence plasmid pWR501; Plasmid pCP301; Plasmid pSF5 TERM 2615 1971067 - 1971093 + g 71 -9.5 -3.4252 | CAAACTTGCATATCC CCGG-CGGGTAAC AAT GTT-CCCGTCCGG TTATGCTGAATCACA TERM 2616 1971860 - 1971874 + g 71 -2.8 -4.86862 | overlap 1971857 1971862 CAATATTTTGTTTTT TCGCTT CGG AAGCTA TTTTACTTTTTTCCC EFER_1917 1972197 - 1972054 - | hypothetical protein shf 1973044 - 1972226 - | Putative carbohydrate transport protein shf protein encoded by Plasmid pAA2, Plasmid virulence plasmid pWR501 and Plasmid pCP301 TERM 2617 1973101 - 1973131 + r 100 -13.4 -5.21506 | opp_overlap 1973101 1973096 1973094, overlap 1973104 ATTACAAATATTACA TCATCGGGCGCTAT AAA ATAGTGCCCGATAA TTTTTATGTTCTTGT TERM 2618 1973131 - 1973101 - R 100 -13.4 -3.00121 | opp_overlap 1973101 1973104, overlap 1973096 1973094 ATTACAAATATTACA TCATCGGGCGCTAT AAA ATAGTGCCCGATAA TTTTTATGTTCTTGT TERM 2619 1973104 - 1973128 + r 100 -15.1 -3.40146 | opp_overlap 1973101 1973096 1973094, overlap 1973101 ACAAATATTACATCA TCGGGCGCTAT AAA ATAGTGCCCGA TAATTTTTATGTTCT umuC 1974493 - 1973225 - | DNA polymerase V, subunit C TERM 2620 1973875 - 1973858 - G 85 -9.9 -4.15044 | GTGTTTTCGAATAAA GCGGATA TCCG TATCCGC GAGATCAAGTACGGT umuD 1974912 - 1974493 - | DNA polymerase V, subunit D fliE 1975484 - 1975170 - | flagellar basal-body component EFER_1922 1975678 - 1975529 - | hypothetical protein TERM 2621 1975610 - 1975596 - G 93 -2.1 -5.61277 | overlap 1975597 TAGAAAAAAACAAAA CCACA AATAA TGTGA CGGTCAATTTTTCGA fliF 1975699 - 1977357 + | flagellar basal-body MS-ring and collar protein fliG 1977350 - 1978345 + | flagellar motor switching and energizing component fliH 1978338 - 1979024 + | flagellar biosynthesis protein TERM 2622 1979619 - 1979643 + G 74 -8.5 -3.95584 | TGATGGCACGTTACA CCCGCGCCGAT GTC ATTGTCGTGGG TTTGATTGGTGAACG fliI 1979021 - 1980394 + | flagellum-specific ATP synthase fliJ 1980416 - 1980859 + | flagellar protein TERM 2623 1981002 - 1980980 - g 77 -2.8 -5.09895 | overlap 1980981 TAGGTACGGAAAAAA CTGTTCTT TCTGCAG AAGAACAA CCATTGCCAAAAGGC fliK 1980856 - 1982004 + | Flagellar hook-length control protein fliL 1982109 - 1982567 + | Flagellar fliL protein fliM 1982572 - 1983576 + | flagellar motor switching and energizing component fliN 1983573 - 1983986 + | flagellar motor switching and energizing component fliO 1983988 - 1984350 + | Flagellar protein fliO fliP 1984350 - 1985087 + | flagellar biosynthesis protein fliQ 1985096 - 1985365 + | flagellar biosynthesis protein fliR 1985358 - 1986161 + | flagellar export pore protein TERM 2624 1987010 - 1986982 - g 70 -4.7 -4.44284 | overlap 1986984 AACGTAAGATTAAAA CGCATAATAAACA GGT TATTTATCATGTG GTACGTTTAACAGAC rcsA 1986438 - 1987061 + | DNA-binding transcriptional activator, co-regulator with RcsB TERM 2625 1987098 - 1987064 - T 71 -9.2 -3.04248 | opp_overlap 1987067 TAATATGCGCTAATA GCTGCTGACTGGTGGC TAC ACCACCAGTCAGATGT ACTCGCTGCCCTATT TERM 2626 1987067 - 1987095 + T 91 -13.2 -2.80935 | opp_overlap 1987064 TATGCGCTAATAGCT GCTGACTGGTGG CTACA CCACCAGTCAGA TGTACTCGCTGCCCT dsrB 1987297 - 1987109 - | hypothetical protein yodD 1987449 - 1987676 + | hypothetical protein TERM 2627 1987715 - 1987692 - f 100 -15.4 -5.60993 | TTTGCCATAAAAAAA TCCCGATCCT GTGA AGGATCGGGA GGAAACTTGCTTATG TERM 2628 1988145 - 1988130 - g 73 -9 -3.61371 | opp_overlap 1988119, overlap 1988119 1988118 AAACTGCAGCGGAAA TGCTGC ATTT GCAGCA AACATTAGGATTGCA EFER_1939 1987844 - 1988791 + | putative mannosyl-3-phosphoglycerate phosphatase (MPGP) EFER_1940 1990476 - 1988764 - | Putative diguanylate cyclase; GGDEF domain; putative PLP-dependent transferase TERM 2629 1990594 - 1990562 - R 100 -13.6 -3.54424 | gap 1, opp_overlap 1990568 1990569 1990581, overlap 1990568 TTTTATCTCTGTAAA GCA-AAACGCCTGGC ATTA ACCAGGCGTTTATGC GTCAGGCTTCTTCGA TERM 2630 1990568 - 1990587 + r 90 -10.7 -3.92075 | opp_overlap 1990562 1990568, overlap 1990569 1990581 CTCTGTAAAGCAAAA CGCCTGG CATTAA CCAGGCG TTTATGCGTCAGGCT TERM 2631 1990587 - 1990568 - R 100 -11.4 -4.54727 | opp_overlap 1990568 1990569 1990581, overlap 1990562 CTCTGTAAAGCAAAA CGCCTGGC ATTA ACCAGGCG TTTATGCGTCAGGCT EFER_1941 1990835 - 1990596 - | conserved hypothetical protein, similar to yodC yedI 1991764 - 1990853 - | conserved hypothetical protein; putative inner membrane protein TERM 2632 1991321 - 1991335 + g 70 -5.6 -4.33927 | opp_overlap 1991320 1991318 CGAAAGAATAAAGTC GGTACG TAC CGCACC TTTGATTTTATCTTT TERM 2633 1991375 - 1991392 + g 76 -4 -5.01535 | opp_overlap 1991362 AAGAGGGTCTTGCGC CGCCAG CTCCTC CAGGCG TTTTTGTCGTTCTGC yedA 1991941 - 1992861 + | conserved hypothetical protein; putative inner membrane protein vsr 1993326 - 1992853 - | DNA mismatch endonuclease of very short patch repair TERM 2634 1992925 - 1992948 + g 75 -4.6 -4.82901 | gap 1 CCACTCTTCTAAGCG CTCAGATAACG CGG CGTCA-CTGAG TTTTTCTCGCCCCCG TERM 2635 1993182 - 1993169 - G 71 -2.3 -4.92757 | overlap 1993170 TCATCAATAATAAAA TCAGG TTTG CCTGG CAGCGAGGCGTCCTG EFER_1945 1994034 - 1993345 - | conserved hypothetical protein, putative Metal-dependent phosphohydrolase, similar to yedJ EFER_1947 1994374 - 1994087 - | putative inner membrane protein similar to yedR, putative permease TERM 2636 1994318 - 1994306 - G 75 -6.9 -4.43844 | overlap 1994307 1994308 1994310 GCACCAGGCATAAAA GGCAC ATA GCGCC AGTTTGCCACCGGGG TERM 2637 1994551 - 1994585 + H 83 -8.8 -4.20025 | overlap 1994542 1994552 1994580 GTATCGCCGGGGTCT GGTTGGTAATATTTAT TGC AGAAATATTACCAACG TTTGTATTCGGACTT TERM 2638 1994552 - 1994584 + H 93 -12.3 -3.11292 | overlap 1994551 1994580 TATCGCCGGGGTCTG GTTGGTAATATTTAT TGC AGAAATATTACCAAC GTTTGTATTCGGACT TERM 2639 1994678 - 1994695 + H 100 -7 -5.75342 | TTACTACCCTATTTA CCGACA TTAATT TGTCGG TTTTTTTTCGCACAA TERM 2640 1994796 - 1994784 - H 74 -4.9 -4.88067 | opp_overlap 1994754 ATGTATTCATAAAAA CAATA ACT TATTG ATATATATACCATAC EFER_1948 1995018 - 1996073 + | Outer membrane protein N precursor (porin) TERM 2641 1996096 - 1996112 + F 100 -10.8 -5.46276 | CTGCAAAATTCCCCA GCCCGC CATGT GCGGGC TTTTTTCTGTCTGTT nmpC 1996644 - 1997747 + | outer membrane porin; DLP12 prophage TERM 2642 1997794 - 1997764 - f 100 -14.9 -3.36492 | opp_overlap 1997764 CTGGTAACGGCATAA TATGTTGGGGAAG GTCAG CCTCCCCAACATA TTTTAGTGACTCCCT TERM 2643 1997764 - 1997794 + F 100 -13.5 -4.28548 | gap 1, opp_overlap 1997764 CTGGTAACGGCATAA TATGTTGGGGAAGG TCAG CCT-CCCCAACATA TTTTAGTGACTCCCT TERM 2644 1997824 - 1997846 + F 76 -9.2 -3.53761 | opp_overlap 1997817 1997829, overlap 1997812 1997827 TCAAGTCACTTATCT TAAGAGACAG TTC CTGTCTCTCA TTTAAACAAACCTTC TERM 2645 1997827 - 1997843 + F 79 -10.9 -2.90496 | opp_overlap 1997829, overlap 1997812 1997824 AGTCACTTATCTTAA GAGACAG TTC CTGTCTC TCATTTAAACAAACC TERM 2646 1997886 - 1997903 + F 100 -9.1 -5.63504 | TTACCCTTTATTTTG GGGGCGT TTTC ACGTCCC TTTTTTTATGCCGTT TERM 2647 1998288 - 1998318 + G 74 -2.5 -5.1166 | overlap 1998310 TATGTTGCCACCGAT GCTTATCGCCTTG ATCTA CAAGGAAAGAAGC TTTTTCGTTTTCCTC TERM 2648 1999202 - 1999232 + G 88 -2 -5.58074 | gap 1 ACGCAAACTGGCCTT CTCA-CACCATTA TTTTCT TAATGCTGTTGAG TTTTTTTGGTGGTTG TERM 2649 1999394 - 1999407 + G 86 -3.8 -5.4433 | CGGACCGTGTCCTGC GCTC GGTATG GAGC TTTTTCTTTCTCTAT trkG 1998187 - 1999662 + | Trk system potassium uptake protein TERM 2650 1999807 - 1999823 + G 93 -2.2 -5.63103 | opp_overlap 1999795 AATCCGCAGATCGAT GCAGCA GAAAA TGATGC TTTTTTTCCTTCAGA hchA 1999771 - 2000622 + | Hsp31 molecular chaperone TERM 2651 2000675 - 2000656 - f 81 -10.7 -3.29096 | opp_overlap 2000649 GTTATTAATCACCAA CCGCAGC CCCTGC GCTGCGG TTCAAGGTTGCTCAA TERM 2652 2001409 - 2001419 + G 72 -5.4 -4.54727 | CGAATGGCTTGATGG CTTC CAC GAAG TTTTAATTTACCCAG yeeI 2001152 - 2001949 + | hypothetical protein TERM 2653 2002155 - 2002137 - T 100 -14.6 -3.3506 | opp_overlap 2002137 2002146 GCCAAATTCTGAGAA GCCCGCTT TTA AAGCGGGC TTTTTGCTTTATATC TERM 2654 2002137 - 2002155 + T 100 -14.6 -5.07011 | opp_overlap 2002137, overlap 2002146 GCCAAATTCTGAGAA GCCCGCTT TTA AAGCGGGC TTTTTGCTTTATATC cbl 2003114 - 2002164 - | DNA-binding transcriptional activator of cysteine biosynthesis nac 2004133 - 2003216 - | Nitrogen assimilation regulatory protein nac (Nitrogen assimilation control protein) TERM 2655 2004155 - 2004171 + H 100 -8.7 -4.99035 | opp_overlap 2004154 2004155 CCTCCGGTTCAGAAT GCCAGTT ATT AGCTGGC TTTTTATCTGAATGG TERM 2656 2004189 - 2004207 + H 70 -6 -4.3255 | opp_overlap 2004188 TTTATCTGAATGGAT TTTGCAAG ATA CTTGCCAA TTTGTTCATTACGAA TERM 2657 2004310 - 2004296 - H 78 -5.6 -4.86731 | GGCTGGCAAAGAAAA TCGGTG ATG CCCCGA ATAAGGTAGCTACGC TERM 2658 2004539 - 2004574 + H 70 -5.4 -4.57474 | opp_overlap 2004541 2004542 2004546, overlap 2004542 2004546 CAGAGGAGCCAAATT AAGGGAAGCAGACGTT CACT GACGTCTGCTTTCTGC TTTTATATCAATTGG TERM 2659 2004542 - 2004571 + H 100 -13.7 -3.22496 | opp_overlap 2004541 2004542 2004546, overlap 2004539 2004546 AGGAGCCAAATTAAG GGAAGCAGACGTT CACT GACGTCTGCTTTC TGCTTTTATATCAAT TERM 2660 2004571 - 2004542 - H 76 -10.8 -2.72591 | opp_overlap 2004542 2004539 2004546, overlap 2004541 2004546 AGGAGCCAAATTAAG GGAAGCAGACGT TCACTG ACGTCTGCTTTC TGCTTTTATATCAAT TERM 2661 2004546 - 2004567 + H 100 -10.9 -4.24984 | opp_overlap 2004542 2004541 2004546, overlap 2004542 2004539 GCCAAATTAAGGGAA GCAGACGTT CACT GACGTCTGC TTTCTGCTTTTATAT TERM 2662 2004567 - 2004546 - H 78 -10.2 -3.26596 | opp_overlap 2004546 2004542 2004539, overlap 2004542 2004541 GCCAAATTAAGGGAA GCAGACGT TCACTG ACGTCTGC TTTCTGCTTTTATAT EFER_1956 2004648 - 2004971 + | putative phage integrase EFER_1957 2005358 - 2005212 - | hypothetical protein EFER_1958 2005895 - 2005536 - | hypothetical protein; putative exported protein EFER_1959 2006371 - 2005907 - | conserved hypothetical protein, putative exported protein TERM 2663 2006511 - 2006538 + r 100 -16.4 -3.36581 | gap 1, opp_overlap 2006502, overlap 2006508 CAGTAATCAGTTCTG CCTGCCGCCAGTG ATT CA-TGGCGGCAGG TTAATTAAACGTTTA EFER_1960 2007604 - 2007155 - | conserved hypothetical protein; putative exported protein EFER_1961 2008275 - 2007604 - | hypothetical protein TERM 2664 2008114 - 2008099 - G 70 -10.4 -3.18383 | ATCTTTATTGAGCAA TGCGGG TGCA CCCGCA TCTCCAGCGACTCCA EFER_1962 2008954 - 2008475 - | conserved hypothetical protein (Hcp-like), similar to Aec32 EFER_1963 2010477 - 2008972 - | hypothetical protein TERM 2665 2008998 - 2009018 + gr 70 -5.4 -4.32046 | gap 1 TGCCGGATTTTGCTC CGGTCGCCG TCTC CGGC-ATCG TTTGATTTTTCAGCA EFER_1964 2013862 - 2010341 - | IcmF-like protein TERM 2666 2010558 - 2010577 + gr 85 -9.3 -4.14598 | CGCGGCGCTCCGCCA CTGACGC CTATCA GCGTCAG TTTGCTTTCATTGCC TERM 2667 2012960 - 2012989 + gr 100 -10 -5.26316 | overlap 2012963 ATGGGCACGACGGGT GAACGTGACGCC CAGAAT GGTGTCACGATC TTTTTTATCCAGTGA TERM 2668 2012963 - 2012986 + gr 77 -10.3 -3.14801 | overlap 2012960 GGCACGACGGGTGAA CGTGACGCC CAGAAT GGTGTCACG ATCTTTTTTATCCAG TERM 2669 2013680 - 2013697 + gr 70 -7.7 -3.72027 | overlap 2013689 CAGCCAGCGGTTAGC CAGTGGT TTGA GCCACTG TTCTTCATACAGCGT EFER_1965 2015314 - 2013881 - | Conserved hypothetical protein, Putative Aec29 EFER_1966 2016060 - 2015317 - | conserved hypothetical protein Aec28 TERM 2670 2015500 - 2015476 - G 80 -11.3 -3.37028 | opp_overlap 2015474 2015491, overlap 2015468 ATCAATACCGGATAA CCCCCGGCTGG ACT CCAGCAGGGTG CCGTTCTCGCGTACA TERM 2671 2015839 - 2015792 - G 73 -12 -2.70932 | gap 1 TCGCCCTGGTAACGA GCTTTCACCAGTGCAGCCCCACC AAA GGCT-GGCTGCTCTGGCGAAAGA ATGCGGTCATAACAG EFER_1967 2018783 - 2016057 - | putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity TERM 2672 2018298 - 2018308 + g 74 -8.2 -3.97947 | CTGACCGTCAGCATT CCGC ATC GCGG TTTCTGCTGACTCGC EFER_1968 2019601 - 2018792 - | Putative membrane protein Aec26 EFER_1969 2021051 - 2019594 - | conserved hypothetical protein, Aec25 EFER_1970 2021485 - 2020952 - | conserved hypothetical protein, putative lipoprotein TERM 2673 2021371 - 2021384 + gr 73 -3.7 -4.7373 | overlap 2021371 CAGTTATCTTCCCAA CCGGG ATAT CCGGG TTTTTGATCACCTGA EFER_1971 2022762 - 2021482 - | conserved hypothetical protein, Aec23 EFER_1972 2023823 - 2022786 - | conserved hypothetical protein, Aec22 EFER_1973 2025619 - 2023787 - | hypothetical protein EFER_1974 2026062 - 2025625 - | hypothetical protein TERM 2674 2025702 - 2025664 - G 95 -14 -3.43944 | ATTATCAAGGGATAA GCTGAACTCCAGAACATC CCT GACGTTCTGGAATTCCAC CGTTGCCGTAATATG EFER_1975 2027546 - 2026065 - | hypothetical protein EFER_1976 2028160 - 2027561 - | conserved hypothetical protein; putative exported protein TERM 2675 2028135 - 2028119 - G 82 -2.1 -5.33405 | overlap 2028121 2028122 CGTACCAAACAAAAA TACCGGC AAT GCCGCTC CAGTGGCGATAAAAA EFER_1977 2028690 - 2029271 + | Conserved hypothetical protein Aec16 (Hcp-like) TERM 2676 2029315 - 2029278 - f 71 -6.9 -4.17789 | opp_overlap 2029282, overlap 2029282 GAAGCATAAATTAAA CCAACAGCATTCTGCCC TGCC GGGCGGAGTGCTGTTTT TTTTGCATCAAATTC TERM 2677 2029311 - 2029282 - f 93 -12.1 -3.67121 | opp_overlap 2029282, overlap 2029278 CATAAATTAAACCAA CAGCATTCTGCCC TGCC GGGCGGAGTGCTG TTTTTTTTGCATCAA TERM 2678 2029282 - 2029311 + F 100 -16.5 -5.81412 | opp_overlap 2029282 2029278 CATAAATTAAACCAA CAGCATTCTGCCC TGCC GGGCGGAGTGCTG TTTTTTTTGCATCAA TERM 2679 2031301 - 2031290 - g 70 -5.8 -4.18494 | TATGCGGACGGAAAA GGTG AGAT CACC GCCACCGATACCGTG EFER_1978 2029481 - 2031427 + | conserved hypothetical protein, putative VgrG/E protein associated with Rhs elements TERM 2680 2031760 - 2031743 - g 70 -9.9 -3.24386 | overlap 2031733 2031757 AAAATTTACCAGCAA CTGCTGT GTAC ACAGCAG ACGCCCGCATTGCTG TERM 2681 2031830 - 2031812 - g 70 -10.2 -3.14132 | GCCCCCCTGGATGAA GCCGCCAC GCA GTGGTGGC AGCAGGTCAAAGCCA EFER_1979 2031449 - 2031868 + | hypothetical protein TERM 2682 2032017 - 2032047 + G 76 -12.4 -2.60075 | overlap 2032016 CGCCGTAGGGGCAGC CGCTGCTGCCACGG CTG CCGTGGCCGCCACG ATTGGTTCCGGCGGG TERM 2683 2032280 - 2032261 - g 86 -7 -4.92756 | ACCATCAAAAAGAAA CCCGCCGC CCGG GCAGCCGG TAAACTGCCGTCTGC TERM 2684 2033127 - 2033151 + G 82 -7.7 -4.52589 | opp_overlap 2033121 2033122, overlap 2033131 GGCATTAAAGCTCGG CGGGCTGACGC CCG GCGACAGTGCG TTTTATGTGGACGAA TERM 2685 2033978 - 2033990 + G 75 -4.7 -4.86621 | opp_overlap 2033971 2033969 AGAAAACCGCCATCA CCTGG CTG CCCGG TTTTTCGTTCCCCGT TERM 2686 2034366 - 2034395 + G 83 -9.9 -4.07687 | gap 1, opp_overlap 2034366, overlap 2034373 2034374 GCAGTTTGCGTATAA CCCGGCAGGC-GAG CTG CTCCGCCAGCAGGG TTTTGGCGGAGAGGT TERM 2687 2034395 - 2034366 - g 72 -9.9 -3.29144 | gap 1, opp_overlap 2034366 2034373 2034374 GCAGTTTGCGTATAA CCCGGCAGGC-GAG CTG CTCCGCCAGCAGGG TTTTGGCGGAGAGGT TERM 2688 2035606 - 2035588 - g 81 -6.7 -4.66163 | gap 1, overlap 2035589 AGGCGGACGGAAAAA CGCGCCTG GCGT CAGG-GCG CAGAAAAACCGGAAA EFER_1980 2031895 - 2036526 + | Conserved hypothetical protein, putative Rhs family protein EFER_1981 2036533 - 2036805 + | hypothetical protein TERM 2689 2036827 - 2036850 + T 89 -6.7 -5.38549 | gap 1 TATATTTAATAACGT GCCGGGATGG TTTAT TC-TCCCGGC TTTTTATTATTTAAC TERM 2690 2037954 - 2037932 - T 78 -5.5 -5.00196 | TCTTAAATAATAAAA GGGGGCAAA ATCAA CTTCCCCCC CCCCTCTTTTTGCAC amn 2039438 - 2037984 - | AMP nucleosidase TERM 2691 2038187 - 2038174 - G 72 -6.7 -4.19648 | GATACACAAAGCAAA GTACC ATAC GGTAC ACGGAATCGGTACCC shiA 2040870 - 2039566 - | shikimate transporter TERM 2692 2040137 - 2040122 - G 74 -2.5 -5.03715 | gap 1 ATGATTTTCAAAAAA GC-GCC GGGAT GGCCGC TAAGTGCTTCCAACA TERM 2693 2040877 - 2040890 + r 75 -2.3 -5.32944 | GGAGTCCATGATTGT CCTGT CAGT ACTGG TTTTTTAGTTATAAG TERM 2694 2041198 - 2041216 + r 100 -14.6 -4.17089 | opp_overlap 2041198 GTGAGATCGCAAAAA GCCCGCTT TAA AAGCGGGC TTTTCAGAATTTGGC TERM 2695 2041216 - 2041198 - R 100 -14.6 -4.64766 | opp_overlap 2041198 GTGAGATCGCAAAAA GCCCGCTT TAA AAGCGGGC TTTTCAGAATTTGGC yeeO 2042857 - 2041421 - | putative Na+-driven multidrug efflux system TERM 2696 2042110 - 2042097 - G 88 -5.3 -5.23765 | CAAATAACAGAAAAA TTCAG TGGC CTGAA ATAGCTTTTCAAGGT TERM 2697 2043138 - 2043155 + H 100 -11.3 -4.84527 | opp_overlap 2043138 GCCAAATTCTGAAAA GCCTGCT TCCG AGCAGGC TTTTTGCTATGTGCA TERM 2698 2043155 - 2043138 - H 100 -11.3 -4.17089 | opp_overlap 2043138 GCCAAATTCTGAAAA GCCTGCT TCCG AGCAGGC TTTTTGCTATGTGCA TERM 2699 2043441 - 2043422 - H 100 -7.9 -6.15828 | opp_overlap 2043422 2043421 2043424 GCGATCAAAAAAAAA CATACCG TCTGGT CGGTATG CTTCTGCCTATGAAT EFER_1986 2043439 - 2044017 + | conserved hypothetical protein, putative Transcriptional regulator EFER_1987 2044040 - 2044858 + | conserved hypothetical protein, putative transcriptionnal regulator EFER_1988 2044858 - 2045376 + | conserved hypothetical protein; putative exported protein TERM 2700 2045523 - 2045536 + F 71 -2.3 -5.22039 | opp_overlap 2045533, overlap 2045526 2045533 CCTTCTCAACGACCC TGAGC AAAA GCGCA TTTTTTGCGTTTAGG TERM 2701 2045671 - 2045656 - f 79 -3.2 -5.40474 | overlap 2045658 ACCCGGCGAAAAAAA TACGCC AAAA AGCGCA TTATTAAAAACAAAA TERM 2702 2045940 - 2045929 - g 70 -7.2 -4.08485 | opp_overlap 2045929, overlap 2045924 CTTATCGAAACCAAA GGCC TGGT GGCC TGTATTGCCGCAGCG EFER_1989 2045845 - 2046174 + | Putative propanediol utilization protein PduJ/pduA EFER_1990 2046192 - 2046476 + | putative Propanediol utilization protein pduA/pduJ EFER_1991 2046491 - 2046769 + | putative propanediol utilization protein: polyhedral bodies pduJ or pduA TERM 2703 2046784 - 2046764 - f 72 -7.5 -3.96148 | GCGTCGCAGCATAAA GCATGACCT GAC AGGGCACGC CCCGTCTGCACTCTT TERM 2704 2047648 - 2047624 - f 77 -10.7 -2.87541 | opp_overlap 2047623 2047624 2047626 2047635, overlap 2047621 2047626 ATTTACAACGAAGTA CACCGCGAGCT GGA AGCTCAGGGTG CTTACTTTATGAACG EFER_1993 2048436 - 2048693 + | Putative ethanolamine utilization protein EutN/carboxysome structural protein Ccml TERM 2705 2049197 - 2049214 + F 80 -11.3 -2.62616 | TCTTGATCCGTCACT GGTGGCA TCCG TGCCACC TGCTATCACCGCTGA TERM 2706 2050424 - 2050414 - g 70 -6.8 -4.09108 | TGCAACTGAGACAAA TGCG TAT CGCA AAGCTGAGTTATCTG TERM 2707 2051691 - 2051670 - g 70 -6.6 -4.09739 | opp_overlap 2051670 CGAATCCGCCGAAAA CCTTGCAG GAAGCG CTGCAAAG TATCTGGACGGTAGA TERM 2708 2052523 - 2052506 - g 84 -7.7 -4.65895 | overlap 2052514 GGCTGCATGGAAAAA GGCAAAG ACGT CTCTGCC GGTGGCGCAATGGTA EFER_1995 2049854 - 2053276 + | putative Formate C-acetyltransferase (Pyruvate formate-lyase) EFER_1996 2053328 - 2054275 + | Putative pyruvate formate-lyase activating enzyme EFER_1997 2054287 - 2054769 + | Putative Bacterial microcompartments protein TERM 2709 2054804 - 2054794 - g 82 -3.2 -5.21709 | TGCTACAGGAAAAAA TCAC CAC GCGA CTGATCGATACCGCC EFER_1998 2054766 - 2055386 + | conserved hypothetical protein, similar to pduL TERM 2710 2055809 - 2055799 - g 74 -8.2 -3.94746 | opp_overlap 2055798, overlap 2055800 GCACAGCGAATTAAA CGCG CTT CGCG GTACTGTTCACAGCG EFER_1999 2055398 - 2056063 + | hypothetical protein TERM 2711 2056328 - 2056342 + G 81 -5 -5.09259 | CTGGCATTTTGATGG TCTCAA CCC TTGGGA TTTTGTTTTACGGTC EFER_2000 2056096 - 2056497 + | Putative membrane transport protein precursor TERM 2712 2056721 - 2056735 + G 70 -5 -4.44915 | GGTGCGGCTTTGGGA TTGTCG GCG TGACAA TTTTCTCGATGATTC EFER_2001 2056507 - 2056842 + | Putative multidrug resistance protein TERM 2713 2056858 - 2056900 + T 78 -9.3 -3.7108 | opp_overlap 2056865, overlap 2056864 2056865 TGACGTAAGGGTGTT TTATACAGCGCCATTTGTA TTGCT TACAAATGGCGCATTCTAA TTTACATATCAAAAT TERM 2714 2056864 - 2056894 + T 100 -12.7 -3.62011 | opp_overlap 2056865, overlap 2056858 2056865 AAGGGTGTTTTATAC AGCGCCATTTGTA TTGCT TACAAATGGCGCA TTCTAATTTACATAT TERM 2715 2056865 - 2056893 + T 100 -16.2 -2.76483 | opp_overlap 2056865, overlap 2056864 2056858 AGGGTGTTTTATACA GCGCCATTTGTA TTGCT TACAAATGGCGC ATTCTAATTTACATA TERM 2716 2056893 - 2056865 - T 100 -16.2 -2.87211 | opp_overlap 2056865 2056864 2056858 AGGGTGTTTTATACA GCGCCATTTGTA TTGCT TACAAATGGCGC ATTCTAATTTACATA erfK 2057835 - 2056909 - | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain EFER_2003 2058535 - 2058050 - | conserved hypothetical protein, putative Cobalamin biosynthesis protein CbiG TERM 2717 2058141 - 2058130 - G 71 -2.2 -5.00884 | ACGGCTGGCAAAAAA CAGA CTTA CCTG ATGAATTCTCATACC TERM 2718 2058898 - 2058918 + r 74 -6.9 -4.24384 | opp_overlap 2058906 AATGTGCCAAACCTG TCAGCTAAT GTT ATGAGCTGA TTTCATTTTGCTCAT pocR 2059952 - 2059035 - | Propanediol utilization: transcriptional regulation TERM 2719 2059167 - 2059126 - G 75 -5.1 -4.59511 | AACACTTTGCAAAAA TAGCTGGTTTGCGAGAAAC CGAG ATTTCGCGCAATGCTGCTA ATACTCCAGTCACTG TERM 2720 2060063 - 2060082 + r 87 -6.4 -5.13741 | opp_overlap 2060058 2060063 CGGACAATAACAAAA GTCTCCTT TTGA GGGGAGAC TTTTTGTTCAGTTCG TERM 2721 2060082 - 2060063 - R 77 -5 -4.95547 | opp_overlap 2060063, overlap 2060058 CGGACAATAACAAAA GTCTCC TTTTGAGG GGAGAC TTTTTGTTCAGTTCG pduF 2060941 - 2060147 - | Propanediol diffusion facilitator TERM 2722 2060631 - 2060614 - G 73 -4.1 -4.8667 | CATACTCGACAAAAA GGTTGCT GTAC AGGAACC ATGCGAGCACAGCTC TERM 2723 2060832 - 2060845 + g 72 -6.7 -4.25104 | TCCCAAAGCCCAAGG CTTGC CCCG GCAAG TTTTGCTGCACAAAC EFER_2008 2061443 - 2061727 + | putative propanediol utilization protein, polyhedral bodies (pduA-like) EFER_2009 2061724 - 2062533 + | putative Propanediol utilization protein: polyhedral bodies pduB pduC 2062552 - 2064216 + | Glycerol dehydratase large subunit TERM 2724 2064878 - 2064862 - g 84 -7.9 -4.59773 | opp_overlap 2064874, overlap 2064864 2064873 CGTGACCGGTAAAAA CCCGCAG GAA CTGCGCG TGGCGCTTTAATAAA PduD 2064227 - 2064889 + | Propanediol utilization: diol dehydratase, medium subunit TERM 2725 2064874 - 2064884 + F 73 -8.2 -3.73968 | opp_overlap 2064864 2064862 2064873 AAACCCGCAGGAACT GCGC GTG GCGC TTTAATAAAGGATTT pduE 2064904 - 2065428 + | Propanediol utilization diol dehydratase, small subunit TERM 2726 2066860 - 2066843 - gf 73 -8.5 -3.6502 | opp_overlap 2066842 2066843, overlap 2066830 TATCCTTTAGCGAAA GTGGAAA GTCT TTTCCAC CTTCGTCATGAAGAC EFER_2013 2065439 - 2067271 + | putative Propanediol utilization: diol dehydratase reactivation PduG TERM 2727 2067603 - 2067582 - gf 73 -8.7 -3.54459 | opp_overlap 2067593 GCAAGGCTGGTTAAA GGGATTCCC TTCC GGGAATACC AGGCTTAATTCACAG EFER_2014 2067033 - 2067611 + | putative Propanediol utilization: diol dehydratase reactivation PduH (modular protein) EFER_2016 2067932 - 2068366 + | putative propanediol utilization protein: polyhedral bodies PduK EFER_2017 2068366 - 2068998 + | conserved hypothetical protein, putative Propanediol utilization pduL TERM 2728 2069061 - 2069032 - gf 76 -10.8 -2.51187 | opp_overlap 2069055, overlap 2069031 2069049 AAATAGTGGATGAAG TTGTCGCCCG TTTACAACGC CGGGCGACAA GCGTCGCTATGTTAA EFER_2018 2068971 - 2069486 + | conserved hypothetical protein, putative Propanediol utilization pduM TERM 2729 2069589 - 2069559 - g 86 -3.9 -5.40072 | CTGGTGGGAAAAAAA CTTCTGCTGGTAC GCCGG GTAACTGCTGAAG GGGAATTGCCAGAAA EFER_2019 2069490 - 2069765 + | putative Propanediol utilization: polyhedral bodies pduN EFER_2020 2069776 - 2070783 + | putative propanediol utilization protein: B12 related pduO, Bifunctional ATP:cob(I)alamin adenosyltransferase/GlcG domain TERM 2730 2072043 - 2072063 + G 81 -10.5 -3.61178 | GCTGGTATCGGTGTC GGTGGTGAA GGA TTTACCACC TTTACGATCGCTACC EFER_2021 2070780 - 2072162 + | putative CoA-dependent proprionaldehyde dehydrogenase pduP EFER_2022 2072173 - 2073285 + | putative Propanediol utilization propanol dehydrogenase pduQ TERM 2731 2074032 - 2074022 - g 72 -4.6 -4.61873 | opp_overlap 2074022 GCGCAGAAAGCAAAA CGAC AAT GCCG TACTTTCCGTCGCAC EFER_2023 2073282 - 2074622 + | putative propanediol utilization protein: ferredoxin pduS EFER_2024 2074625 - 2075179 + | putative Propanediol utilization: polyhedral bodies pduT EFER_2025 2075155 - 2075529 + | putative propanediol utilization protein: polyhedral bodies pduU EFER_2026 2075531 - 2075980 + | conserved hypothetical protein; putative Propanediol utilization protein pduV EFER_2027 2075970 - 2077184 + | putative acetate/propionate kinase pduW TERM 2732 2077224 - 2077191 - T 100 -8.3 -5.93809 | gap 1, opp_overlap 2077193, overlap 2077192 2077194 CTTGCATAAAAAAAA GTA-TGGTGAGGATCA GAA CGATCCTCACCACTAT AATCGCCATACTTCA TERM 2733 2077223 - 2077192 - T 100 -11.8 -4.15201 | gap 1, opp_overlap 2077193, overlap 2077191 2077194 TTGCATAAAAAAAAG TA-TGGTGAGGATCA GAA CGATCCTCACCACTA TAATCGCCATACTTC TERM 2734 2077193 - 2077221 + T 83 -11.8 -2.79302 | opp_overlap 2077192 2077191 2077194 TGCATAAAAAAAAGT ATGGTGAGGATC AGAAC GATCCTCACCAC TATAATCGCCATACT TERM 2735 2077220 - 2077194 - T 100 -16 -3.65606 | opp_overlap 2077193, overlap 2077192 2077191 GCATAAAAAAAAGTA TGGTGAGGATCA GAA CGATCCTCACCA CTATAATCGCCATAC TERM 2736 2077236 - 2077272 + T 75 -8.9 -3.64755 | CTATAATCGCCATAC TTCAAGTTGCATGTA CTGCGTC TGCCTGCAACTTGAA TTATTCAGAGTCTAT yeeX 2077629 - 2077294 - | hypothetical protein yeeA 2078864 - 2077797 - | Inner membrane protein yeeA TERM 2737 2077992 - 2077976 - G 72 -4.3 -4.60487 | overlap 2077977 CAGTATTGGCAAAAA CGGTCTG AGG CTGACCA TCATAAAGCGTATGC TERM 2738 2078920 - 2078946 + r 79 -10.9 -3.19602 | opp_overlap 2078919 2078917 2078914, overlap 2078917 CTAACTGAATGACAG CAGAGCGGG CAGCTTTAA CCCGCTCTG TGTTGATCTGCGCCA sbmC 2079429 - 2078962 - | DNA gyrase inhibitor; in high copy protects cells from replication inhibitor MccB17; SOS induced; blocks MccB17 export (SbmC protein) TERM 2739 2080103 - 2080088 - H 86 -9 -4.25104 | TTGGCTTGATGAAAA GGTGGA GTGA TCCACC TTAACCCATATCGAA TERM 2740 2080156 - 2080121 - H 84 -11.3 -3.13071 | opp_overlap 2080124 2080128, overlap 2080119 2080124 2080128 AACCCATATCGAAGA GCACAAAGCCTTGCA ATCCAG TGCAAAGCTTTGTTC GTCTCAGATTACACA TERM 2741 2080124 - 2080153 + H 74 -9.4 -3.27994 | opp_overlap 2080124 2080121 2080119 2080128, overlap 2080128 CCATATCGAAGAGCA CAAAGCCTTGCA ATCCAG TGCAAAGCTTTG TTCGTCTCAGATTAC TERM 2742 2080153 - 2080124 - H 81 -11.6 -2.76964 | opp_overlap 2080124 2080128, overlap 2080121 2080119 2080128 CCATATCGAAGAGCA CAAAGCCTTGCA ATCCAG TGCAAAGCTTTG TTCGTCTCAGATTAC EFER_2031 2080141 - 2080344 + | hypothetical protein TERM 2743 2080695 - 2080711 + GT 80 -5.2 -4.95618 | AGTGCTCTTGCATCG TTGCTT TCATT AAGCAA TTTCTTTTTCATGTT TERM 2744 2080792 - 2080805 + GT 70 -5.3 -4.39407 | ACACATGGTCATTAT CTGTT GAAG AACAG TTTTACATTCTTTGG TERM 2745 2082100 - 2082082 - gT 76 -7.5 -4.23486 | AATCAGGGAAAATAA GTGGAAA AGACA TTTCCAC AAAAGAATACATGAA EFER_2032 2080287 - 2082317 + | putative acyltransferase protein; putative membrane protein TERM 2746 2082346 - 2082328 - T 100 -16 -4.62002 | opp_overlap 2082328 AGTAATCATAGAAAA GGCGCCGT TAA ACGGCGCC TTATTTATATCAAAC TERM 2747 2082328 - 2082346 + T 100 -16 -4.14627 | opp_overlap 2082328 AGTAATCATAGAAAA GGCGCCGT TAA ACGGCGCC TTATTTATATCAAAC EFER_2033 2084794 - 2082356 - | putative head-binding domain of phage tailspike protein TERM 2748 2084860 - 2084875 + r 75 -10.4 -2.80398 | opp_overlap 2084860, overlap 2084857 TTGGGCATAAAAAAA CCCAGC CGAA GCTGGG TCGTTGCGTTGGTTA TERM 2749 2084875 - 2084860 - R 100 -10.4 -5.60993 | opp_overlap 2084857 2084860 TTGGGCATAAAAAAA CCCAGC CGAA GCTGGG TCGTTGCGTTGGTTA EFER_2034 2086771 - 2084927 - | DNA transfer protein from phage TERM 2750 2085323 - 2085341 + g 76 -8 -4.23434 | TTCCGTGATGAACTT GGCTGGAG AGT CACCGGCC TTTTCCGCTATTTTG TERM 2751 2086188 - 2086201 + g 70 -5.2 -4.40572 | TTTTTCGCCACTTCT GGCG CAATAT CGCC TTTTATAGCCGTTAT EFER_2035 2088180 - 2086768 - | putative DNA transfer protein gp20 EFER_2036 2088846 - 2088193 - | DNA transfer protein gp7 from phage origin EFER_2037 2089303 - 2088821 - | hypothetical protein TERM 2752 2089300 - 2089316 + g 70 -5.1 -4.37527 | TGAGCTTTATTTCCA TCACTGC TCC GCAATGA TTTTGATGGTTGTGG GP 2090148 - 2089300 - | Packaged DNA stabilization protein gp26 EFER_2039 2091566 - 2090148 - | Packaged DNA stabilization protein from phage TERM 2753 2091298 - 2091316 + g 72 -8.8 -3.74347 | ACGCGGCCACTTCCG GCGACGTC ACC GACTTCGC TTTCGCCTTTGTAGA GP 2092178 - 2091567 - | putative DNA stabilization protein GP4 EFER_2041 2092365 - 2092045 - | hypothetical protein TERM 2754 2092338 - 2092353 + gr 76 -10.4 -2.96274 | opp_overlap 2092338 TCTCCAGATAAAAAA GGGAGC CGAA GCTCCC TCTGGTTATCACGCG TERM 2755 2092353 - 2092338 - GR 100 -10.4 -5.36441 | opp_overlap 2092338 TCTCCAGATAAAAAA GGGAGC CGAA GCTCCC TCTGGTTATCACGCG GP 2093657 - 2092362 - | Coat protein (Protein gp5) TERM 2756 2092652 - 2092688 + g 72 -6 -4.42386 | gap 1, opp_overlap 2092655, overlap 2092655 CCGGAGTGGTATCAG CAAGAGAGGTGTTTACG TTAG CGTAAGC-CTTCTCTTC TTTTGTCAGTGACGC TERM 2757 2092655 - 2092685 + g 78 -7.7 -4.33182 | gap 1, opp_overlap 2092655, overlap 2092652 GAGTGGTATCAGCAA GAGAGGTGTTTACG TTAG CGTAAGC-CTTCTC TTCTTTTGTCAGTGA GP 2094568 - 2093657 - | Scaffolding protein (Protein gp8) TERM 2758 2093885 - 2093904 + g 81 -8.6 -4.4017 | gap 1, overlap 2093888 CGCGGATTGCCCGTC CATCGCCAG CAA CTGGCG-TG TTTTCTCAGGATTAG TERM 2759 2093888 - 2093902 + g 88 -11.4 -3.80535 | overlap 2093885 GGATTGCCCGTCCAT CGCCAG CAA CTGGCG TGTTTTCTCAGGATT GP 2096747 - 2094582 - | Portal protein (Protein gp1) TERM 2760 2096420 - 2096434 + g 70 -10 -3.22102 | overlap 2096418 GAACGCCAACGTTAA CGGCAA TTT TTGCCG TGTTATGGCGCATAT GP 2098247 - 2096748 - | DNA packaging protein gp2 (Terminase large subunit) GP 2098719 - 2098225 - | DNA packaging protein gp3 (Terminase small subunit) EFER_2047 2098916 - 2098737 - | hypothetical protein EFER_2048 2099160 - 2098918 - | hypothetical protein TERM 2761 2099261 - 2099221 - R 78 -10.5 -3.32844 | CCGTGTAGGGTATAA GCCATTGTCGAGACCATTC ATT GAATGGCCTCTGCAATAAC CGATGTCTTTCCATC EFER_2049 2100274 - 2099513 - | conserved hypothetical protein from phage origin TERM 2762 2100199 - 2100182 - GR 100 -10.5 -5.4251 | TTCAGATATAAAAAA GCCCCGC GAAT GCGAGGC TAAATCCTGGTGTTT EFER_2050 2100386 - 2100234 - | putative bacteriophage protein (Gene 65) Rz 2100853 - 2100374 - | Endopeptidase from phage origin (Lysis protein Rz) ybcS 2101335 - 2100838 - | putative lysozyme; DLP12 prophage EFER_2053 2101516 - 2101313 - | conserved hypothetical protein from phage origin (similar GP13) TERM 2763 2101674 - 2101643 - R 93 -10.9 -4.11692 | opp_overlap 2101651, overlap 2101644 TATGCACGGGCAAAA CGGCAGGAGGTTG TTAGCG CAACCTCTTGCCA CCCGCTTTCACGAAG TERM 2764 2101673 - 2101644 - R 86 -12.2 -3.06694 | opp_overlap 2101651, overlap 2101643 ATGCACGGGCAAAAC GGCAGGAGGTTG TTAGCG CAACCTCTTGCC ACCCGCTTTCACGAA TERM 2765 2101973 - 2101923 - R 91 -7 -5.4251 | gap 1, opp_overlap 2101923 2101971 TGCAGATATAAAAAA TCCCGAAACCGTTATGCAGGC TCTAACTATT ACCTGCG-AACTGTTTCGGGA TTGCATTTTGCAGAC EFER_2054 2102810 - 2102187 - | Antitermination protein Q TERM 2766 2102743 - 2102770 + g 100 -12.8 -4.58395 | gap 1 GAGTCAGAAGCCGTG GCCCG-TGGTGAG TCG CTCATCATCGGGC TTTTTGGCGAATGAA pph 2103547 - 2102807 - | Serine/threonine-protein phosphatase EFER_2056 2103656 - 2103450 - | conserved hypothetical protein, Protein ninH from phage origin ninG 2104264 - 2103653 - | Protein ninG from prophage EFER_2059 2104649 - 2104257 - | conserved hypothetical protein from phage origin ninF 2104818 - 2104639 - | conserved hypothetical protein from phage origin EFER_2061 2105237 - 2104818 - | conserved hypothetical protein, putative protein ninX from phage origin EFER_2062 2105787 - 2105371 - | putative ninB protein EFER_2063 2106080 - 2105784 - | conserved hypothetical protein from phage origin EFER_2064 2106279 - 2106058 - | hypothetical protein TERM 2767 2106717 - 2106697 - g 100 -7.6 -5.5074 | opp_overlap 2106697 2106703 TAATCCAATAAAAAA GGGCTACT GTGTA AATAGCCC CTGTTATTAGCTCAG EFER_2066 2106581 - 2106727 + | hypothetical protein EFER_2067 2108121 - 2106745 - | Replicative DNA helicase TERM 2768 2106781 - 2106793 + g 72 -7.7 -3.97088 | ATATCGTCTGCCACG TGCAC CGG GTGCA TTTGATGTTGTGCAA EFER_2068 2109065 - 2108118 - | hypothetical protein TERM 2769 2108640 - 2108650 + g 79 -4 -5.04987 | overlap 2108646 GGCTTCATGTGCGGG TGAA TTG TTCA TTTTTTGAGCGTATT EFER_2069 2109505 - 2109068 - | hypothetical protein EFER_2070 2109659 - 2109363 - | Regulatory protein CII from phage origin TERM 2770 2109391 - 2109410 + g 100 -9.2 -5.5112 | opp_overlap 2109391 TGTATTTGATCAGAA CGCTCGGT TGCC GCCGGGCG TTTTTTATTGGTGAG cro 2110026 - 2109766 - | regulatory protein from bacteriophage origin cI 2110072 - 2110779 + | repressor protein of bacteriophage origin EFER_2073 2110886 - 2111263 + | hypothetical protein EFER_2074 2111238 - 2111723 + | hypothetical protein TERM 2771 2111754 - 2111721 - f 80 -3.8 -5.38054 | opp_overlap 2111724 2111729, overlap 2111724 2111730 TCCGACAAAGAAAAA TAAGAAAGTCCGGC CTCAGC GCCGGGTTTTCTTT GCCTTACGATCCCCA TERM 2772 2111751 - 2111724 - f 75 -5.5 -4.76311 | opp_overlap 2111724 2111729, overlap 2111721 2111730 GACAAAGAAAAATAA GAAAGTCCGGC CTCAGC GCCGGGTTTTC TTTGCCTTACGATCC TERM 2773 2111724 - 2111751 + F 84 -9.9 -3.76125 | opp_overlap 2111721 2111724 2111730, overlap 2111729 GACAAAGAAAAATAA GAAAGTCCGGC CTCAGC GCCGGGTTTTC TTTGCCTTACGATCC TERM 2774 2111729 - 2111746 + F 84 -6.2 -4.94058 | opp_overlap 2111724 2111721 2111730, overlap 2111724 AGAAAAATAAGAAAG TCCGGC CTCAGC GCCGGG TTTTCTTTGCCTTAC EFER_2075 2112100 - 2112525 + | conserved hypothetical protein from phage origin EFER_2076 2112864 - 2112547 - | hypothetical protein EFER_2077 2112796 - 2112996 + | Restriction inhibitor protein ral (Antirestriction protein) TERM 2775 2112987 - 2113004 + FH 82 -6.9 -4.87389 | opp_overlap 2112984 2112987 TAAACAGAATAACAA GGCTGCC TGAT GGTGGCC TTTATTTTTGGCATA TERM 2776 2113079 - 2113034 - fH 100 -17.1 -4.53119 | overlap 2113036 2113037 AAACAACAGAATAAA TACTGCTCCGTGTATTCATTC CAAC GAGTGAATACACGGAGCAATG TCGCTCGTAACTAAA TERM 2777 2113077 - 2113036 - fH 100 -19.7 -3.84048 | overlap 2113034 2113037 ACAACAGAATAAATA CTGCTCCGTGTATTCATTC CAAC GAGTGAATACACGGAGCAA TGTCGCTCGTAACTA TERM 2778 2113076 - 2113037 - fH 100 -21 -2.88802 | overlap 2113036 2113034 CAACAGAATAAATAC TGCTCCGTGTATTCATTC CAAC GAGTGAATACACGGAGCA ATGTCGCTCGTAACT TERM 2779 2113133 - 2113150 + G 91 -7.7 -5.14563 | gap 1, overlap 2113135 TTGGAAATCTTCTTT GCCCTCCA GTG TGG-GGGC TTTTTTGATGGAGGA EFER_2078 2113118 - 2114137 + | conserved hypothetical protein from phage kil 2114277 - 2114429 + | Protein kil EFER_2080 2114411 - 2114596 + | hypothetical protein EFER_2081 2114505 - 2114675 + | hypothetical protein TERM 2780 2114907 - 2114884 - gf 73 -8.2 -3.62096 | gap 1 CGGTATTACGTGAAA GCCA-CGGCAA CTA TTACCGATGGC GAAAACAGTCATACG erf 2114656 - 2115291 + | DNA single-strand annealing protein; essential recombination function protein Erf TERM 2781 2115531 - 2115518 - gf 70 -5.3 -4.41206 | opp_overlap 2115518 AATTACCGGAGAAAA CATCA GGGT TGATG TTTATCAGGGGCAAA EFER_2083 2115201 - 2115674 + | hypothetical protein TERM 2782 2115740 - 2115768 + GF 79 -11.7 -2.52464 | GACCCGCGCCGCTGT TCCGGCAATTCCG TAT CGGAGGTGCTGGA TAAATTCAGGAAAAA abc 2115677 - 2115994 + | Anti-RecBCD protein 2 EFER_2085 2115852 - 2116295 + | hypothetical protein EFER_2086 2116435 - 2116725 + | conserved hypothetical protein from phage origin EFER_2087 2116712 - 2117266 + | conserved hypothetical protein from phage origin EFER_2088 2117220 - 2117927 + | hypothetical protein EFER_2089 2117879 - 2118199 + | hypothetical protein from phage origin EFER_2090 2118196 - 2118483 + | conserved hypothetical protein from phage origin EFER_2091 2118476 - 2118757 + | hypothetical protein TERM 2783 2118784 - 2118799 + F 89 -6.1 -5.26907 | opp_overlap 2118784 AACGCAACTAACAAA CCTCG CACCGT CGAGG TTTTCTTTTATCTTA TERM 2784 2118799 - 2118784 - f 72 -6.1 -4.34223 | opp_overlap 2118784 AACGCAACTAACAAA CCTCG CACCGT CGAGG TTTTCTTTTATCTTA TERM 2785 2118816 - 2118829 + F 95 -8.1 -5.18371 | TTTCTTTTATCTTAA CTCGC TACG GCGAG TTTTGTTTTATGGAG EFER_2092 2118852 - 2119019 + | hypothetical protein TERM 2786 2119012 - 2119025 + T 100 -9.5 -4.89063 | opp_overlap 2119005 2119012 2119011 TGAAAGAACACCAAG CCGCC TGAT GGCGG TTTCTTTTTGCCTGG int 2120418 - 2119222 - | integrase TERM 2787 2121326 - 2121306 - g 72 -11.1 -3.01924 | CATGGCGTGGCAATA CCAGTTGGG TAG CCCCACTGG CATGGCATCCTGAAA TERM 2788 2121508 - 2121494 - g 70 -5.6 -4.31293 | GTACATATCAACAAA TGCCCG GTA CTGGCA CAGGCGAATACGCTA sbcB 2120582 - 2122006 + | exonuclease I TERM 2789 2122001 - 2122054 + T 73 -5.3 -4.58663 | gap 1, opp_overlap 2122013 2122014, overlap 2122010 2122013 TACGCGCAAGAGATT GTCTGAT-TTAAAGCCTCCGCCGCTG ATA CGGCGGAGGATAATTTAGGATCAGGC TTTTTGAACGGTGAT TERM 2790 2122038 - 2122013 - T 100 -12.5 -3.64822 | opp_overlap 2122010 2122001 2122013, overlap 2122014 ATTGTCTGATTTAAA GCCTCCGCCGC TGAT ACGGCGGAGGA TAATTTAGGATCAGG TERM 2791 2122013 - 2122038 + T 86 -11.8 -2.92613 | opp_overlap 2122013 2122014, overlap 2122010 2122001 ATTGTCTGATTTAAA GCCTCCGCCG CTGATA CGGCGGAGGA TAATTTAGGATCAGG TERM 2792 2122037 - 2122014 - T 100 -16 -2.78679 | opp_overlap 2122013 2122010 2122001, overlap 2122013 TTGTCTGATTTAAAG CCTCCGCCGC TGAT ACGGCGGAGG ATAATTTAGGATCAG yeeD 2122276 - 2122049 - | hypothetical protein yeeE 2123348 - 2122290 - | conserved hypothetical protein; putative inner membrane protein TERM 2793 2123505 - 2123478 - R 100 -12.8 -6.04419 | opp_overlap 2123478 AAAAGAATAAAAAAA CCGGAGCCAAAT ATTC ATTCGACTCCGG TTTATTATTAGAAAA TERM 2794 2123478 - 2123505 + r 87 -8.4 -4.44667 | opp_overlap 2123478 AAAAGAATAAAAAAA CCGGAGCCAAAT ATTC ATTCGACTCCGG TTTATTATTAGAAAA yeeF 2124884 - 2123526 - | putative amino-acid/amine transporter TERM 2795 2125065 - 2125039 - R 91 -7.3 -5.26875 | opp_overlap 2125042, overlap 2125042 GTTTGAAGCAAAAAA TAACCGACGCT AATTA AACGTCGGTTT TAGTCATTTTTTGAC TERM 2796 2125042 - 2125062 + r 76 -6.8 -4.46432 | opp_overlap 2125042 2125039 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTAGTCATTTTTT TERM 2797 2125062 - 2125042 - R 100 -9 -4.72473 | opp_overlap 2125042, overlap 2125039 TGAAGCAAAAAATAA CCGACGCT AATTA AACGTCGG TTTTAGTCATTTTTT yeeY 2126079 - 2125150 - | putative DNA-binding transcriptional regulator yeeZ 2126949 - 2126125 - | putative epimerase, with NAD(P)-binding Rossmann-fold domain yoeB 2127286 - 2127032 - | toxin of the YoeB-YefM toxin-antitoxin system yefM 2127534 - 2127283 - | antitoxin of the YoeB-YefM toxin-antitoxin system hisL 2127818 - 2127868 + | his operon leader peptide TERM 2798 2127933 - 2127959 + F 100 -19.5 -5.4505 | opp_overlap 2127933 TGAACGCATGAGAAA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG TERM 2799 2127959 - 2127933 - f 100 -20.2 -3.99405 | opp_overlap 2127933 TGAACGCATGAGAAA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG hisG 2128014 - 2128913 + | ATP phosphoribosyltransferase hisD 2128919 - 2130223 + | bifunctional histidinal dehydrogenase and histidinol dehydrogenase TERM 2800 2131079 - 2131093 + G 72 -7.1 -4.16943 | opp_overlap 2131076 2131077 2131074 CACTGAAAGAGATCC CCTGC GTGGA GCAGG TTTTCGACTCTGAAA hisC 2130220 - 2131290 + | histidinol-phosphate aminotransferase hisB 2131290 - 2132357 + | fused histidinol-phosphatase ; imidazoleglycerol-phosphate dehydratase hisH 2132357 - 2132947 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF hisA 2132947 - 2133684 + | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase hisF 2133666 - 2134442 + | imidazole glycerol phosphate synthase, catalytic subunit with HisH hisI 2134436 - 2135047 + | fused phosphoribosyl-AMP cyclohydrolase ; phosphoribosyl-ATP pyrophosphatase TERM 2801 2135095 - 2135118 + T 100 -12.4 -5.27335 | opp_overlap 2135095 CATCCGGCAAAAAAA GGGCAAGGTG TCAC CACCCTGCCC TTTTTCTTTAAAACC TERM 2802 2135118 - 2135095 - T 100 -14.6 -5.41143 | opp_overlap 2135095 CATCCGGCAAAAAAA GGGCAAGGTG TCAC CACCCTGCCC TTTTTCTTTAAAACC EFER_2110 2136121 - 2135141 - | Chain length determinant protein (Polysaccharide antigen chain regulator) TERM 2803 2136323 - 2136298 - R 74 -7 -4.39166 | gap 1, opp_overlap 2136298 2136290 GCTTACATACCAAAA TGCCTGAATAG TGAGG CTAT-CAGGCA TAATTGGAATTATAA ugd 2137546 - 2136353 - | UDP-glucose 6-dehydrogenase TERM 2804 2137444 - 2137454 + g 70 -6.8 -4.09685 | CGATATCCAGTGCAA CCAC TTC GTGG TTTTGCGCAATCAGA TERM 2805 2137718 - 2137740 + r 81 -11.2 -3.25014 | opp_overlap 2137719, overlap 2137713 TTTGTATAATAAAAA AGCCCGGAGG GTT TCTCCGGGCC TTGCATTGATTAATT TERM 2806 2137739 - 2137719 - R 100 -14 -5.55769 | opp_overlap 2137718 2137713 TTGTATAATAAAAAA GCCCGGAG GGTTT CTCCGGGC CTTGCATTGATTAAT gnd 2139175 - 2137769 - | gluconate-6-phosphate dehydrogenase, decarboxylating EFER_2113 2141467 - 2140610 - | Glycosyltransferase TERM 2807 2141065 - 2141055 - G 71 -3.2 -4.84017 | AATTCGTGACAAAAA GTAC CAA GCAC ATCAATTCCTTTATT TERM 2808 2141486 - 2141459 - G 76 -12.2 -2.65298 | opp_overlap 2141462, overlap 2141462 TTTATTTATTATAAT TAAGACCATGTT TTAT AACATGGCCTTA TGCTCAAAGTTAGTT TERM 2809 2141483 - 2141462 - G 71 -9.5 -3.4759 | opp_overlap 2141462, overlap 2141459 ATTTATTATAATTAA GACCATGTT TTAT AACATGGCC TTATGCTCAAAGTTA cpsG 2142863 - 2141496 - | phosphomannomutase TERM 2810 2142610 - 2142556 - G 76 -10.6 -3.29511 | TTCATGCCGTTATAA TCCATCGGGTTATGGCTGGCGGTAAC TTC GATGCCGCCATCCACACCGAGATGGA ACGTGGCGAAATAGA EFER_2115 2144324 - 2142867 - | Mannose-1-phosphate guanylyltransferase [GDP] (GDP-mannose pyrophosphorylase) (GMP) TERM 2811 2143889 - 2143914 + g 71 -2.7 -4.74801 | gap 1, opp_overlap 2143889 CAAAAGTTAAGATAT TTCCTTGTTCAA CAA TTGAA-ATGGAA TTTTTGATAGCGTTA nudD 2144811 - 2144308 - | GDP-mannose mannosyl hydrolase TERM 2812 2144660 - 2144695 + g 73 -9 -3.68798 | opp_overlap 2144682, overlap 2144656 2144687 TCTTTCTGCACGCGC CCTCCCGGCACA AACCAGTAACCC TGTGCCGGGCGG TTGGTTCTTTTGCCA TERM 2813 2144767 - 2144719 - G 83 -10.3 -4.05446 | gap 1, opp_overlap 2144687 TTTGCCAAGCAGAAA CTCGCCGCGGCTGT-TCTCAAC AATAAA GTCGAGAGAGAGCAGCGGCGTG GAGCGCACTACCGTG fcl 2145776 - 2144811 - | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase TERM 2814 2145478 - 2145505 + g 70 -10.6 -2.79321 | overlap 2145475 AGAAACAGCAGTTTG TTCACGTCGTTC TGAT GCGCGACGTGAA TGATGTTGCTCTCAA gmd 2146897 - 2145779 - | GDP-D-mannose dehydratase, NAD(P)-binding TERM 2815 2146559 - 2146543 - G 70 -10.1 -3.25823 | TCTTTTCCAGACCAA GGAAGCG GAT CGCCTCC AGTAAACGCAGTGTG EFER_2119 2147743 - 2146919 - | hypothetical protein TERM 2816 2147279 - 2147268 - G 74 -2.2 -5.08824 | opp_overlap 2147277 TTTTTAGTTAAAAAA TCAC CTCC GCGA ATGTGAATCGCACAT TERM 2817 2147734 - 2147746 + g 73 -3.5 -4.77173 | TCTTGATACCCTTAT TTATT AAC AATAA TTTCTTTTATGAACA EFER_2120 2149204 - 2148530 - | hypothetical protein TERM 2818 2149071 - 2149083 + g 100 -3.4 -6.20267 | CGTAAAATATAAGGC GCAT TCATT ATGC TTTTTTTATTTTTAA EFER_2121 2150384 - 2149194 - | hypothetical protein TERM 2819 2149768 - 2149790 + gr 100 -2 -5.96521 | opp_overlap 2149774, overlap 2149769 2149774 TTCCTTGTATTGTAC CCATAATCAA CTA TTGATTTTGC TTTTTTTTGCTTAAT TERM 2820 2149774 - 2149784 + gr 76 -4 -4.99665 | opp_overlap 2149774, overlap 2149769 2149768 GTATTGTACCCATAA TCAA CTA TTGA TTTTGCTTTTTTTTG TERM 2821 2149920 - 2149942 + gr 85 -2.8 -5.40072 | opp_overlap 2149900 2149899 2149923 ATTGTACATGCTATA TAATTCTTCA ACC TGAAAAATTG TTTTTTTCAAAAAAC TERM 2822 2150328 - 2150338 + gr 80 -5.4 -4.88736 | opp_overlap 2150328, overlap 2150311 2150318 ATTTACTCTGTAGAA GAGT TTC ACTC TTTTTATACCTCCTG EFER_2122 2151474 - 2150311 - | hypothetical protein TERM 2823 2151162 - 2151150 - GR 91 -3.3 -5.51612 | ATATAAAAAAGAAAA GCATG TAC CAAGC ATATTCAAAATTATT EFER_2123 2152154 - 2151474 - | Putative chloramphenicol acetyltransferase (fragment) TERM 2824 2151921 - 2151938 + g 70 -7.1 -4.13014 | TCCTATTTTAGCTCC TTTTGCA ATAC TGCAAAA TTTTCCCACTGTCGC EFER_2124 2153079 - 2152138 - | hypothetical protein TERM 2825 2152194 - 2152207 + g 71 -2.5 -4.93177 | opp_overlap 2152194 TCACAAATGAATAAA TTTTA TAAA TAAAA TTTTGTTGATTTTTC TERM 2826 2152996 - 2153006 + g 100 -5.4 -6.0427 | opp_overlap 2152996 ACTATTCTTACTTAA TGCT GAC AGCA TTTTTTTTGTATGCT EFER_2125 2154369 - 2153080 - | hypothetical protein galF 2155644 - 2154751 - | putative subunit with GalU wcaM 2157206 - 2155812 - | putative colanic acid biosynthesis protein TERM 2827 2155931 - 2155946 + g 79 -4 -5.03314 | CATGAACATTAACCA GAGATA GCAA TGTCTC TTTTTTAGCCATGAA TERM 2828 2157168 - 2157150 - G 70 -10.3 -3.18383 | AGGGGTATGGAGGAA GGCAAGC GCGGA GCTTGCC GTCAGGAAGGTGCGT wcaL 2158437 - 2157217 - | putative glycosyl transferase TERM 2829 2157853 - 2157863 + g 74 -2.4 -5.03145 | GGCAATTTTTTCCCT CGGG CAG CCCA TTTTTTGCAGCCTTC TERM 2830 2158435 - 2158423 - G 71 -3.4 -4.75404 | opp_overlap 2158423 AAATTTCAGTAAAAA GAAG CCGAC CTTC ATTTCGCCTCCCCGA wcaK 2159714 - 2158434 - | putative pyruvyl transferase TERM 2831 2158977 - 2159008 + g 75 -4.4 -4.73682 | gap 1 GAGACGTTTGTCGAA CGGTGCCAGTT-CGC GCA GGGTAATTGCCACCG TTTTCTGTTGTGCGG wzxC 2161265 - 2159787 - | colanic acid exporter wcaJ 2162661 - 2161267 - | putative UDP-sugar lipid carrier transferase TERM 2832 2162474 - 2162462 - G 74 -3.3 -4.88736 | overlap 2162463 CATGAGCGATAAAAA TCGGT GAT ACCGC CCAGCATCTGGAACA cpsG 2164086 - 2162716 - | phosphomannomutase TERM 2833 2164118 - 2164134 + r 75 -2.1 -5.3658 | overlap 2164119 AGGCAATAGTGGGCC CTGACCG AAG CGGCCAA TTTTGTTTTTGTCGT TERM 2834 2164181 - 2164199 + r 81 -11 -3.30124 | TTGCATTCATTGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA TERM 2835 2164269 - 2164287 + r 81 -11 -3.30124 | opp_overlap 2164238 CGACAGCCATCGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA cpsB 2165803 - 2164367 - | mannose-1-phosphate guanyltransferase wcaI 2167029 - 2165806 - | putative glycosyl transferase TERM 2836 2166173 - 2166197 + g 76 -3.5 -5.00616 | overlap 2166183 2166184 2166184 GGGAAAAATTGCATA TTGCGCAGT CCGCGCT GCTGCGCCA TTTTTTCCAGCCGCG TERM 2837 2166700 - 2166682 - G 70 -6.6 -4.07568 | TCCCGGCGTGCAAAA CAGCGTTG GTA CTACGCCG ATAATGCGATCCGGC nudD 2167505 - 2167026 - | GDP-mannose mannosyl hydrolase TERM 2838 2167464 - 2167416 - G 74 -8.1 -4.05446 | gap 1, opp_overlap 2167384 TTTGCCAAGCAGAAA CTCGCCGCGGCTGT-TCTCGAC AATAAA GTCGAGAGAGAGCAGCGGAGTG GAGCGCACTACCGTG fcl 2168473 - 2167508 - | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase gmd 2169597 - 2168476 - | GDP-D-mannose dehydratase, NAD(P)-binding TERM 2839 2169256 - 2169240 - G 70 -10.1 -3.25823 | TCTTTTCCAGACCAA GGAAGCG GAT CGCCTCC AGCAGACGCAGTGTG wcaF 2170172 - 2169624 - | putative glycose-acyl transferase wcaE 2170934 - 2170188 - | putative glycosyl transferase wcaD 2172352 - 2171060 - | putative colanic acid polymerase TERM 2840 2172195 - 2172210 + gr 70 -6.1 -4.19238 | GTGATGGGGAAACTT TCGCC AAGCTG GGCGA TTTTGACGTTAACCA wcaC 2173472 - 2172255 - | putative glycosyl transferase wcaB 2173957 - 2173469 - | putative acyl transferase TERM 2841 2173835 - 2173856 + g 100 -2.1 -5.75342 | opp_overlap 2173828 2173826, overlap 2173826 CATCAACAGCGGGGC CGCCCACAG ATTG TTGAGGACG TTTTTTTTGCGCCAC wcaA 2174799 - 2173960 - | putative glycosyl transferase TERM 2842 2174917 - 2174884 - R 73 -10.3 -2.52464 | opp_overlap 2174911, overlap 2174894 2174896 TGCGGCGTGAACGTA GGTCGGATAAGATGC GTCA GCATCGCATCCGACA GCGGATCTCGTTATT wzc 2177090 - 2174928 - | protein-tyrosine kinase wzb 2177536 - 2177093 - | protein-tyrosine phosphatase TERM 2843 2177254 - 2177285 + g 70 -5.8 -4.21194 | TGCCGCGCATCTCAG GTGCCATCTCGCAT AAGC GTTCGATATGGCGC TTTTCCATGGTCAAA wza 2178681 - 2177542 - | lipoprotein required for capsular polysaccharide translocation through the outer membrane TERM 2844 2177875 - 2177886 + g 74 -2.2 -5.15969 | GCTAAAGTCCATTTT CAGG GTGC TCTG TTTTTTCACTTCACC TERM 2845 2180756 - 2180744 - g 70 -4.1 -4.72272 | overlap 2180745 CCGCTGGATGAAAAA CGTGA ATA TCACA CCATTGCCGGGCTGC yegH 2179340 - 2180923 + | fused putative membrane protein ; putative membrane protein EFER_2148 2181005 - 2180880 - | hypothetical protein EFER_2149 2181187 - 2182212 + | putative transposase, IS110 family TERM 2846 2182237 - 2182195 - T 95 -12.7 -3.39187 | overlap 2182218 AATACTGAATATCAA CCTCGGCAGCTCGCCTGAC ACAAG GTCAGTCAATCTGACGAGG TGCTGAAAAAAAGTT asmA 2184614 - 2182761 - | putative inner membrane protein involved in outer membrane protein assembly TERM 2847 2184348 - 2184337 - G 72 -7.2 -4.21974 | TGATGACTTAACAAA GGCC AGAG GGCC ACATCAAGGCGCATA dcd 2185217 - 2184636 - | 2'-deoxycytidine 5'-triphosphate deaminase udk 2185950 - 2185309 - | uridine/cytidine kinase TERM 2848 2185350 - 2185360 + g 70 -4.6 -4.56597 | opp_overlap 2185346 2185344 CTTTCAATATATCGA TCGC GAT GCGG TTTTTCCCGCCGCGC TERM 2849 2186843 - 2186857 + G 95 -10 -4.67353 | ATCTGTTGCGCCATC GCAACC CTC GGTTGC TTTTTGAGTCACTGC yegE 2186287 - 2189604 + | putative diguanylate cyclase, GGDEF domain signalling protein alkA 2190499 - 2189642 - | 3-methyl-adenine DNA glycosylase II TERM 2850 2190737 - 2190719 - g 72 -5.2 -4.4874 | opp_overlap 2190720, overlap 2190720 GCTAAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG yegD 2190633 - 2191985 + | putative chaperone TERM 2851 2192032 - 2191994 - T 100 -9.6 -4.74103 | gap 1, opp_overlap 2191994 2191993 TCGTTAATTGAAAAA TGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCA GTTTCTCCGCTGCCT TERM 2852 2191994 - 2192032 + T 71 -9.6 -2.93572 | gap 1, opp_overlap 2191994, overlap 2191993 TCGTTAATTGAAAAA TGGCTCAGCAGC-GGCT TAAATC AGCCTGCGCCTGAGCCA GTTTCTCCGCTGCCT yegI 2193944 - 2191998 - | hypothetical protein yegJ 2194145 - 2194606 + | hypothetical protein TERM 2853 2194663 - 2194632 - T 73 -8.8 -3.55761 | opp_overlap 2194636 2194657, overlap 2194633 TATTGATTGCTTAAA CTGGCGGTTGAA CCGTTGTC TTCAACCGCCAT GCGATGTTCATTCTG TERM 2854 2194662 - 2194633 - T 88 -12.3 -2.73243 | opp_overlap 2194636 2194657, overlap 2194632 ATTGATTGCTTAAAC TGGCGGTTGAA CCGTTGTC TTCAACCGCCA TGCGATGTTCATTCT yegK 2195432 - 2194671 - | hypothetical protein TERM 2855 2194937 - 2194921 - G 71 -9.5 -3.53444 | TCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC GGCATCTTCATCGGT TERM 2856 2195444 - 2195417 - G 74 -8.4 -3.91897 | overlap 2195420 CGGCTGATGCATAAA CCAGACGCCAGC TCAC ACTGACGTCCAG CCTTTTGGCGCTTCC yegL 2196088 - 2195429 - | hypothetical protein TERM 2857 2195900 - 2195910 + g 72 -5.4 -4.56597 | GAACGTCACAATACC GAGT TCC ACTC TTTTTAAAGCCAGCG TERM 2858 2196382 - 2196401 + H 90 -11.4 -3.71649 | opp_overlap 2196381, overlap 2196392 2196394 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 2859 2196710 - 2196729 + H 90 -11.4 -3.71649 | opp_overlap 2196709, overlap 2196720 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 2860 2197037 - 2197056 + H 90 -11.4 -3.71649 | opp_overlap 2197036, overlap 2197047 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 2861 2197968 - 2197945 - g 74 -8.2 -3.90291 | gap 1, opp_overlap 2197945 2197947 ATGTTGGTAACCAAA TCTCCAGTGGT GAT ACCACCGG-GA TTGTGGTGATCACCC mdtA 2197296 - 2198543 + | multidrug efflux system, subunit A TERM 2862 2198540 - 2198529 - f 85 -5.8 -5.09173 | opp_overlap 2198539 GAATACGCGAAAAAA GGAG CACG CTCC TGATGCAGGTGTTAC TERM 2863 2198568 - 2198587 + G 72 -6.4 -4.33819 | opp_overlap 2198570 TACCCCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 2864 2199849 - 2199827 - g 73 -4.1 -4.7657 | gap 1 GAAAAAGGCGAAAAA CCGTTG-GCG GCGG CGCTCAAGGG CGCGGGTGAAATCGG mdtB 2198543 - 2201665 + | multidrug efflux system, subunit B TERM 2865 2202397 - 2202375 - g 78 -7.6 -4.30416 | opp_overlap 2202377 2202388, overlap 2202377 2202388 2202391 ACGATGAACTGAAAA CCGCCGCTGA ATA TCAGCCGCTG ATTATTCATTACAAC TERM 2866 2204441 - 2204425 - g 77 -3 -5.07486 | gap 1, opp_overlap 2204425 2204427, overlap 2204427 CATCGTGAAGAAAAA CG-CCAT TATG ATGGTCG ATTTTGCGCTCGAAG mdtC 2201666 - 2204743 + | multidrug efflux system, subunit C mdtD 2204744 - 2206159 + | multidrug efflux system protein baeS 2206156 - 2207559 + | sensory histidine kinase in two-component regulatory system with BaeR TERM 2867 2207839 - 2207827 - g 71 -3.4 -4.8048 | overlap 2207837 TGGTGACAGCAAAAA TCGA AGAGA TCGA CCGCCTGCTCGGGCT TERM 2868 2207990 - 2208001 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCATG TERM 2869 2208188 - 2208176 - g 78 -5.5 -4.81551 | overlap 2208177 CAGCCACATTAAAAA CCTGC GTC GCAAG CTGGAATCTCTCGAC baeR 2207556 - 2208278 + | DNA-binding response regulator in two-component regulatory system with BaeS yegP 2208458 - 2208790 + | hypothetical protein TERM 2870 2208798 - 2208824 + F 74 -6.5 -4.42806 | overlap 2208823 ATACGTAATTACGAT GCCGGGCGT GGGTTGTTG GCGTCCGGC TTTATTTCCAAATAA EFER_2169 2209034 - 2209285 + | hypothetical protein EFER_2170 2209287 - 2209583 + | conserved hypothetical protein, putative plasmid stabilisation system protein TERM 2871 2210916 - 2210906 - g 78 -8.2 -4.24948 | TGAGCATATGGAAAA CGCC AAA GGCG AAGCAATGCCGGTCG yegQ 2209686 - 2211047 + | putative peptidase TERM 2872 2211182 - 2211213 + F 100 -13.9 -5.75342 | CCAGGAACCACCTCC TTAGCCTGCGTAA TCTCCC TTACGCAGGCTGA TTTTTTTTGGCCCAC TERM 2873 2211685 - 2211704 + G 73 -3.6 -4.75472 | GAAATTGATATCGCT CAGGTT AATAAAGA AACCTG TTTTATTAATATGGC TERM 2874 2211786 - 2211772 - g 71 -2.7 -4.77757 | opp_overlap 2211776 CCGGAAAAATTAAAA GCCGC GCTGG GTGGC GTCTCTTACATCATT yegS 2211304 - 2212203 + | hypothetical protein EFER_2173 2212975 - 2212277 - | putative phosphoglycolate phosphatase TERM 2875 2212965 - 2212947 - G 95 -12.4 -4.15044 | opp_overlap 2212947 GTTCCTCGCAATAAA GCCTGGCA CCA CGCCAGGC TTGTCATCATCAGGA TERM 2876 2212947 - 2212965 + g 82 -11.7 -3.44051 | opp_overlap 2212947 GTTCCTCGCAATAAA GCCTGGC ACCAC GCCAGGC TTGTCATCATCAGGA EFER_2174 2214294 - 2212975 - | Ribitol transporter TERM 2877 2214279 - 2214307 + g 86 -11 -3.87641 | gap 1, opp_overlap 2214279 2214280, overlap 2214280 2214306 TTGTAGGATACAAAA CGCCGCTCCGGTG CACA CACCGGAG-GGCA TTTGTGACAGATGTT TERM 2878 2214307 - 2214279 - G 100 -13.2 -4.57353 | gap 1, opp_overlap 2214279 2214280 2214306, overlap 2214280 TTGTAGGATACAAAA CGCCGCTCCGGTG CACA CACCGGAG-GGCA TTTGTGACAGATGTT TERM 2879 2214306 - 2214280 - G 100 -14.5 -3.3393 | gap 1, opp_overlap 2214279 2214280, overlap 2214279 TGTAGGATACAAAAC GCCGCTCCGGTG CACA CACCGGAG-GGC ATTTGTGACAGATGT TERM 2880 2214280 - 2214306 + g 90 -14.5 -2.92102 | gap 1, opp_overlap 2214280 2214279, overlap 2214279 TGTAGGATACAAAAC GCCGCTCCGGTG CACA CACCGGAG-GGC ATTTGTGACAGATGT EFER_2175 2215784 - 2214321 - | Xylulose kinase (Xylulokinase) TERM 2881 2215047 - 2215029 - G 78 -5.2 -4.78326 | overlap 2215033 TCCCAAAGAAATAAA CGCATCTC CGG GAGAAACG GCCCCCACACCAATT TERM 2882 2215138 - 2215103 - G 81 -9.7 -3.99374 | CGCCAGCAACAACAA CCGAAGATGTCAGCC CCCATC GGCTGGCAACTTCAG GGGAAAGAGTGGCAG TERM 2883 2215572 - 2215562 - G 74 -8.2 -3.9712 | opp_overlap 2215562 GCATTTGACCAGAAA GGCC AAT GGCC TTGATCGCCTGCCAG EFER_2176 2217210 - 2215798 - | D-arabinitol 4-dehydrogenase TERM 2884 2218033 - 2218048 + G 70 -4 -4.71426 | TAGGTCGTCAAAGCC CTATCT TCAA AGATGG TTTTATTGATGAGCA EFER_2177 2217378 - 2218319 + | D-arabitol repressor EFER_2178 2219353 - 2218322 - | putative catabolite repressor protein TERM 2885 2219086 - 2219114 + g 72 -10.3 -3.34715 | overlap 2219084 2219092 TCTCTTCAAATTTTT CGGCAATCGATCC AAA GTATCGGTTGTCG TATTTCGGCACAATC EFER_2179 2219512 - 2220264 + | Ribitol 2-dehydrogenase (RDH) EFER_2180 2220251 - 2221879 + | Ribitol kinase TERM 2886 2222019 - 2221999 - g 70 -4 -4.63048 | TCCAGAAATAATAAA CAGTGG TTGGGTTTG CCACTG CATCTGATATGGGGA TERM 2887 2222330 - 2222343 + G 70 -6.7 -4.11838 | ACGGGATTCGTGGTT TAGCG TATC CGCTA TTTCTCTACTCATTT TERM 2888 2223089 - 2223106 + G 72 -4.7 -4.66318 | overlap 2223092 2223101 TGTCTAACTTCCTGG CTCCGGC AATT GCCGTGG TTTTATTACCGTGGT EFER_2181 2221981 - 2223255 + | Ribitol transporter TERM 2889 2223305 - 2223276 - T 100 -15.1 -2.78547 | opp_overlap 2223277, overlap 2223273 GTAGCGCATCAATCA CTCATCCTCTCCC GCAT GGGAGAGGATGAT TTCACATCAGGCGAT TERM 2890 2223277 - 2223304 + T 100 -18.6 -3.59979 | opp_overlap 2223276 2223273 TAGCGCATCAATCAC TCATCCTCTCCC GCAT GGGAGAGGATGA TTTCACATCAGGCGA fbaB 2224364 - 2223312 - | fructose-bisphosphate aldolase class I EFER_2183 2224392 - 2224541 + | hypothetical protein EFER_2184 2225874 - 2224531 - | hypothetical protein TERM 2891 2225056 - 2225046 - G 81 -6.8 -4.64048 | CACGAGATAAAGAAA GCGT AAA ACGC AGATCGCCAAACCAG EFER_2185 2228580 - 2225875 - | hypothetical protein TERM 2892 2225904 - 2225914 + g 86 -6.8 -4.99861 | TAAGTTCGAGTTGCA GCTC ATT GAGC TTTTTGTAATTGGTG TERM 2893 2227691 - 2227704 + g 70 -4.5 -4.45473 | opp_overlap 2227677 2227691 TCATCACGGTGAAAC TCCGG ATGT TCGGA TATTTTTTTGATTGC EFER_2186 2231292 - 2228605 - | hypothetical protein TERM 2894 2229768 - 2229784 + g 75 -6.7 -4.43879 | ATTCAAGATATTGAT TATACTT TTT AAGTATA TTTTCGTTAGGTAAT EFER_2187 2233853 - 2231280 - | hypothetical protein TERM 2895 2231883 - 2231893 + g 71 -3.2 -4.74767 | GTTATTTAATGCCAG TCTG TAC CAGG TTTTATATTCATTCT TERM 2896 2233324 - 2233335 + g 70 -4.4 -4.57474 | TCATATTGCGTGAAC GGTA AAAT TACC TTTTCTATGACTTGA yegX 2234856 - 2233939 - | putative membrane-bound hydrolase thiD 2235622 - 2234822 - | bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase EFER_2190 2236407 - 2235619 - | Hydroxyethylthiazole kinase (4-methyl-5-beta-hydroxyethylthiazole kinase) (Thz kinase) (TH kinase) EFER_2191 2236426 - 2236587 + | hypothetical protein yohN 2236821 - 2237165 + | hypothetical protein TERM 2897 2237191 - 2237171 - T 100 -12.6 -5.64274 | CCATCGATAAAAAAA TCCCCCTC ATCCA GAGGGGGA ATAAAATATTACTAC EFER_2193 2238257 - 2237217 - | conserved hypothetical protein, putative exported protein EFER_2194 2240744 - 2238261 - | putative Paral outer membrane protein, putative exported protein TERM 2898 2239029 - 2239003 - G 75 -6.6 -4.30576 | overlap 2239005 CCCGCATTATCAAAA GTGGTTGAGTTT GAT AAACTCAACTGC CGCCGTGTTGTGGTA TERM 2899 2240178 - 2240155 - G 70 -6.6 -4.07568 | TCGGCTTTGTTAAAA CTGGCATCGG AATG CAGCTGCCAG CCCAACAGATTTATG TERM 2900 2240359 - 2240347 - G 74 -3.3 -4.90079 | ACTTCAATAACAAAA GCCTG GGG CACGC TAAGATCCAGTCTGA TERM 2901 2240431 - 2240444 + g 80 -5.3 -5.01553 | opp_overlap 2240429 TCACGTAAAGGCACA CAATC CGTA GATTG TTTTGTTTGTGAATT EFER_2195 2241485 - 2240757 - | Putative periplasmic chaperone protein , putative exported protein TERM 2902 2241484 - 2241461 - G 100 -13.8 -4.56597 | overlap 2241462 CGCGCCTTTGAAAAA GGCCGGCGAC GAGA GTCGCCGGCA AAGATGTTAATCAGT TERM 2903 2241483 - 2241462 - G 100 -17.3 -3.33744 | overlap 2241461 GCGCCTTTGAAAAAG GCCGGCGAC GAGA GTCGCCGGC AAAGATGTTAATCAG EFER_2196 2242024 - 2241491 - | putative Paral fimbrial-like protein TERM 2904 2242280 - 2242251 - R 100 -10.3 -5.5604 | opp_overlap 2242254 2242262 TTAATGAATAAAAAA TAAGAAATCATTC ATCA AAATGATTTCTTA TTGAGGAAATGAAAG EFER_2197 2242588 - 2242307 - | conserved hypothetical protein; putative exported protein TERM 2905 2242786 - 2242758 - R 100 -16.1 -4.23781 | GGCAGCAAAACGAAA CACCGCGTCAACA TTA CATTGACGCGGTG GGAATAATAGAGAGG mrp 2243914 - 2242805 - | antiporter inner membrane protein TERM 2906 2244449 - 2244432 - g 93 -8.5 -4.86731 | TCGCCTGAAAGAAAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 2907 2244494 - 2244481 - g 70 -3.8 -4.60487 | opp_overlap 2244486 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTAAA TERM 2908 2245123 - 2245111 - g 76 -9.1 -3.73775 | opp_overlap 2245107 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG TERM 2909 2246029 - 2246006 - g 76 -7.5 -4.21194 | gap 1 TGGCACCACGTAAAA TGCGCTTCGG TATCT CCGAAG-GCA TGGTGATGGCTGCCG metG 2244082 - 2246115 + | methionyl-tRNA synthetase TERM 2910 2246128 - 2246147 + F 100 -10.7 -5.01553 | TAATCCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATGAATT TERM 2911 2246546 - 2246536 - g 71 -2.4 -4.94262 | GAGAGTAAAAACAAA CGCC TAT GGCT GGCTGATGATGCAGC TERM 2912 2247511 - 2247524 + G 71 -9.5 -3.50326 | opp_overlap 2247505, overlap 2247505 CAAAAACATCCCGCT GCGGC TATT GCCGC TTATGCTACTTTGCT TERM 2913 2247951 - 2247931 - g 73 -4 -4.7629 | opp_overlap 2247931 CCACTAATTGAAAAA GAAAGCTG GGAGA CATCTTTC ATTCCTTTTACACCA EFER_2200 2246257 - 2250054 + | putative conserved protein involved in molybdate metabolism TERM 2914 2251388 - 2251357 - g 100 -13.7 -3.84961 | GATCGAATGACGAAA GCCTGCGCTGCGT TCCCAC ACGCAGCACTGGC AGCACTGGCGGAACT TERM 2915 2251975 - 2251955 - g 73 -9.1 -3.61244 | opp_overlap 2251958, overlap 2251958 CACTGGAGAAAGCAA TAAGAGCAT GGA ATGCCCTTA CTCTATCTCCGCATA TERM 2916 2253079 - 2253065 - g 78 -5.7 -4.75309 | CTAAACCCAATAAAA GCGAT GATGA ATCGC GGGCTGATGAGGCGG TERM 2917 2253292 - 2253282 - g 70 -6.8 -4.10657 | opp_overlap 2253281 TTATAGCGTCGAAAA CCAG CTA CTGG CCTGTTTCCGGGTGG TERM 2918 2253562 - 2253544 - g 70 -5.3 -4.42386 | gap 1, overlap 2253546 TGGGCAGGCAGAAAA TG-CCCGA GTGG TCGGGTCA TGGGGCTGGCGAATA EFER_2201 2250067 - 2253861 + | putative Molybdate metabolism regulator (molR) TERM 2919 2254900 - 2254866 - g 71 -2.1 -5.00846 | gap 1, overlap 2254867 TAAATACCATAAAAA CTTCCCCCA-TGCGAC GCTC GCCGCACTGGCAGAAC TGCTGGCGTTAACAG TERM 2920 2254972 - 2254959 - g 81 -4.5 -5.10767 | CATCGAAGACAAAAA GCTGC CTGC ACAGC AAAAAGCACGCGATG yehI 2253871 - 2257515 + | hypothetical protein TERM 2921 2257524 - 2257543 + F 71 -9.3 -3.04517 | opp_overlap 2257518 2257523 2257522, overlap 2257523 CCATTAAAACACAGC GGGCAGT GATGCG ACTGCCC ATTTTCAACACGACT yehK 2257575 - 2257892 + | hypothetical protein TERM 2922 2258050 - 2258031 - f 81 -9.3 -3.74251 | opp_overlap 2258031 TATAGCTTTATTAAA GGGGGAA ACGGTA TTCCCCC TTAGATGCGTTTCAA TERM 2923 2258031 - 2258050 + F 72 -9.3 -3.11732 | opp_overlap 2258031 TATAGCTTTATTAAA GGGGGAA ACGGTA TTCCCCC TTAGATGCGTTTCAA TERM 2924 2258451 - 2258483 + F 100 -10.1 -4.41548 | opp_overlap 2258451 2258456 2258459, overlap 2258459 CGTCAAAGTTGTAAA TAAAAGAACCTGC CTCACCA GCAGGTTTTTTTA TTTTCTGCGATCTGC TERM 2925 2258483 - 2258451 - f 73 -8.6 -3.63968 | opp_overlap 2258451 2258459, overlap 2258456 2258459 CGTCAAAGTTGTAAA TAAAAGAACCTGCC TCACC AGCAGGTTTTTTTA TTTTCTGCGATCTGC TERM 2926 2258478 - 2258456 - f 71 -4.1 -4.88405 | opp_overlap 2258451 2258459, overlap 2258451 2258459 AAGTTGTAAATAAAA GAACCTGCC TCACC AGCAGGTTT TTTTATTTTCTGCGA TERM 2927 2258475 - 2258459 - f 73 -5.8 -4.54026 | opp_overlap 2258451 2258459, overlap 2258456 2258451 TTGTAAATAAAAGAA CCTGCC TCACC AGCAGG TTTTTTTATTTTCTG TERM 2928 2258459 - 2258475 + F 100 -5.1 -6.14618 | opp_overlap 2258459 2258456 2258451, overlap 2258451 TTGTAAATAAAAGAA CCTGC CTCACCA GCAGG TTTTTTTATTTTCTG TERM 2929 2258639 - 2258658 + F 72 -9.3 -3.11732 | opp_overlap 2258639 AATCATTTTATTAAA GGGGGAA GAGGTA TTCCCCC TTAGATGCGTTTCAA TERM 2930 2258658 - 2258639 - f 81 -9.3 -3.75437 | opp_overlap 2258639 AATCATTTTATTAAA GGGGGAA GAGGTA TTCCCCC TTAGATGCGTTTCAA TERM 2931 2259054 - 2259097 + F 73 -10 -2.90725 | gap 1, opp_overlap 2259054 2259064 2259067, overlap 2259067 GTTATCGTCAAAGTA GTAAATA-AAAGAACCTGC CTCACCA GCAGGTTTTTTTTATTTAC TGTGATCTGCTTTCC TERM 2932 2259086 - 2259064 - f 74 -4.1 -4.96388 | opp_overlap 2259054 2259067, overlap 2259054 2259067 AAGTAGTAAATAAAA GAACCTGCC TCACC AGCAGGTTT TTTTTATTTACTGTG TERM 2933 2259083 - 2259067 - f 73 -5.8 -4.56436 | opp_overlap 2259054 2259067, overlap 2259064 2259054 TAGTAAATAAAAGAA CCTGCC TCACC AGCAGG TTTTTTTTATTTACT TERM 2934 2259067 - 2259083 + F 100 -5.1 -6.25578 | opp_overlap 2259067 2259064 2259054, overlap 2259054 TAGTAAATAAAAGAA CCTGC CTCACCA GCAGG TTTTTTTTATTTACT yehL 2259203 - 2260291 + | putative ABC superfamily protein TERM 2935 2261050 - 2261095 + G 86 -12.5 -3.53012 | TGGCAGGATACCTTT CCGGAATGCCAGCCCCGGTCT GGCA AAACTGGTGCTGGCAGTCAGG TTTGCAGCAGGCAGG TERM 2936 2261140 - 2261128 - g 71 -3.3 -4.83593 | opp_overlap 2261128 AACAACTACTAAAAA CGGTT CTT ACCCG TTTGCGCCAGCACAA yehM 2260302 - 2262581 + | hypothetical protein yehP 2262574 - 2263710 + | hypothetical protein TERM 2937 2264081 - 2264062 - gf 71 -9.2 -3.02144 | overlap 2264065 2264073 2264074 CTACCCTGCCCAATA CCACGCGC AAAC GCGCGCAG GCGCTGGTCGCTAAA TERM 2938 2264078 - 2264065 - gf 70 -9.5 -2.73875 | overlap 2264062 2264073 2264074 CCCTGCCCAATACCA CGCGC AAAC GCGCG CAGGCGCTGGTCGCT yehQ 2263602 - 2265701 + | hypothetical protein EFER_2209 2265837 - 2266307 + | conserved hypothetical protein; putative exported protein yehS 2266820 - 2266350 - | hypothetical protein yehT 2267586 - 2266867 - | response regulator in two-component system with YehU yehU 2269268 - 2267583 - | sensory kinase in two-component system with YehT TERM 2939 2268166 - 2268176 + g 74 -3.2 -4.88736 | TTGATTTCTGACTGT GTGA GCA TCGC TTTTTGTCGCTCATA TERM 2940 2269987 - 2269970 - g 74 -2.6 -5.08824 | TCGGCACGTAAAAAA CAGGGC AAAGAA GCGCTG GTGGTTGGCTGGAAT mlrA 2269490 - 2270221 + | DNA-binding transcriptional regulator yohO 2270281 - 2270388 + | hypothetical protein yehW 2271100 - 2270369 - | putative transporter subunit: permease component of ABC superfamily transporter yehX 2272031 - 2271105 - | putative transporter subunit: ATP-binding component of ABC superfamily transporter yehY 2273181 - 2272024 - | putative transporter subunit: permease component of ABC superfamily TERM 2941 2272572 - 2272548 - G 85 -2.7 -5.39721 | overlap 2272550 TCAGCAGAGAAAAAA TCGCCCCCTGC CGC GCAGTGGAAAA GTAGCACCAGACGCC TERM 2942 2273008 - 2272994 - G 75 -5.6 -4.64676 | overlap 2272996 CTACCGGGAATAAAA CAGGCT GTC AGCCAG GCGCAACATACGCCC TERM 2943 2273120 - 2273110 - G 74 -8.2 -3.97368 | overlap 2273111 CGCGTAACTGATAAA CGGC AGC GCCG CTGCGATTGCCGTCA yehZ 2274105 - 2273188 - | putative transporter subunit: periplasmic-binding component of ABC superfamily TERM 2944 2273763 - 2273776 + g 73 -3.8 -4.84529 | AGATTAACTTGTTTT GCTC TGCATC GAGC TTTTTGACTTTCTCA TERM 2945 2274242 - 2274224 - R 100 -12.4 -3.83927 | AGATAAATACTTAAA GGGCGCAA ACG TCGCGCCC TGGCTAAAGCATTAC bglX 2276551 - 2274254 - | beta-D-glucoside glucohydrolase, periplasmic TERM 2946 2274402 - 2274420 + g 75 -6.6 -4.37658 | CTGACAGTCTGAGTT TCGCCCGG CTT CAGGGTGA TTTTCTCAAAGCCTT TERM 2947 2275189 - 2275208 + g 70 -3.5 -4.72986 | overlap 2275181 2275190 TGGCATACAGCACCT TGCCGTT TTCACC GACGGCG TTTTTAATCCCGGTC dld 2276694 - 2278463 + | D-lactate dehydrogenase, FAD-binding, NADH independent TERM 2948 2278467 - 2278496 + T 74 -10.1 -3.22409 | gap 1, opp_overlap 2278467 2278468, overlap 2278470 GAAGTGAAATAAAAA TTACGGATGGCAGA GTA TC-GCCATCCGTAC TTCACTTAATCGTTC TERM 2949 2278496 - 2278467 - T 100 -10.1 -5.33026 | gap 1, opp_overlap 2278467 2278470, overlap 2278468 GAAGTGAAATAAAAA TTACGGATGGCAGA GTA TC-GCCATCCGTAC TTCACTTAATCGTTC TERM 2950 2278495 - 2278468 - T 100 -13.6 -3.78189 | gap 1, opp_overlap 2278467 2278470, overlap 2278467 AAGTGAAATAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGTA CTTCACTTAATCGTT TERM 2951 2278470 - 2278493 + T 83 -11.8 -2.79684 | gap 1, opp_overlap 2278468 2278467, overlap 2278467 GTGAAATAAAAATTA CGGATGGCAGA GTA TC-GCCATCCG TACTTCACTTAATCG pbpG 2279434 - 2278502 - | D-alanyl-D-alanine endopeptidase TERM 2952 2278530 - 2278546 + g 100 -6.5 -5.8096 | overlap 2278507 GCCGTCTGCCCCGCC GCCGC CATCTGA GCGGC TTTTTGTTTTTTATA TERM 2953 2279020 - 2279009 - G 70 -5.8 -4.1552 | opp_overlap 2278998 CATCGCCTTAATAAA GGCT TTGT AGCC ACCGGGATAATGGTG TERM 2954 2279047 - 2279057 + g 81 -8.2 -4.3739 | opp_overlap 2279032, overlap 2279036 GGTGCGCAAGGCTTG CCGC CGC GCGG TTTTCTGAAGACATC TERM 2955 2279595 - 2279560 - R 88 -11.2 -3.75015 | overlap 2279561 AGAATCGTGAGGAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAACG TCAAAGAACTTTCTA TERM 2956 2279594 - 2279561 - R 100 -14.7 -2.84527 | overlap 2279560 GAATCGTGAGGAAAT GCTGCATTGCTGACA TTTA CGCCAGCAATGCAAC GTCAAAGAACTTTCT yohC 2280195 - 2279608 - | conserved hypothetical protein; putative inner membrane protein yohD 2280365 - 2280943 + | conserved hypothetical protein; putative inner membrane protein yohF 2281834 - 2281073 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 2957 2282092 - 2282072 - R 81 -11.1 -3.31248 | GAAGATTTCCCACAA GGCCGGG TAGTTAT CCCGGCC TTGCAACGATTACAG dusC 2283052 - 2282102 - | tRNA-dihydrouridine synthase C TERM 2958 2283082 - 2283060 - H 73 -2.6 -5.1675 | overlap 2283061 TTACCCACGAAAAAA TGAGGCGCTA TGG TAACGTCTCC GCTCTACTGTTTAAA TERM 2959 2283118 - 2283145 + H 71 -9.2 -2.99947 | overlap 2283122 2283143 2283144 TCAATATCTGTGCAC CAAAGCCTGGAG ACGA CTCTATGCTTTG TCTATGTGACAGTTA TERM 2960 2283385 - 2283404 + G 72 -5.7 -4.44548 | overlap 2283387 TTTCGTACTGATCTA TGCCTGC CTGTAT GCAGGTA TTTTCATTGCATCTC yohJ 2283329 - 2283727 + | conserved hypothetical protein; putative inner membrane protein TERM 2961 2284370 - 2284383 + G 84 -8.1 -4.65933 | opp_overlap 2284369 GCGGGATTATCACAT CGGTG GTTG CACCG TTTATTTTCCCGATC yohK 2283724 - 2284419 + | conserved hypothetical protein; putative inner membrane protein TERM 2962 2284422 - 2284439 + F 71 -4.1 -4.76644 | opp_overlap 2284422 2284424, overlap 2284424 GGTAGTAGGATAAAA TTTGCGA TACG TCGCACA TTTTTGATACGTGTT cdd 2284549 - 2285433 + | cytidine/deoxycytidine deaminase TERM 2963 2285440 - 2285466 + F 83 -9.4 -3.99806 | opp_overlap 2285439 CTCGGTTAACATCAG TGCCGGATAAAC GTA GTGCATCCGGCA TTTCTGCTCCCTTCT TERM 2964 2285496 - 2285512 + F 93 -10.9 -4.15044 | opp_overlap 2285494 TGGTGTCGAAAATCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAG TERM 2965 2286171 - 2286181 + G 71 -2.4 -5.00884 | CTCTATTTCTTTAAG CGTG AAC CCCG TTTTTTAGGCCCGCT sanA 2285580 - 2286299 + | hypothetical protein TERM 2966 2286417 - 2286430 + G 74 -8.1 -4.03234 | opp_overlap 2286417 2286416 AACGGGTTAAAAATG CACCG GAAC CGGTG TTTGTCTGGCGAGCA yeiS 2286302 - 2286541 + | conserved hypothetical protein; putative inner membrane protein TERM 2967 2287157 - 2287167 + G 77 -6.8 -4.45517 | CCAATTGATATTGGC CGCT TGC AGCG TTTTATCACTGATTT TERM 2968 2287492 - 2287481 - g 77 -7.2 -4.45544 | CTGGAGCAACTAAAA GCGG AAAA CCGC GCAGTACTTGTCACC TERM 2969 2287759 - 2287775 + G 85 -11.5 -3.68827 | AAAAGAGTTTGCCAG CGCCCGG GAA CTGGGCG TTTCGATCATCGATG yeiT 2286860 - 2288098 + | putative Fe-S cluster containing oxidoreductase subunit yeiA 2288092 - 2289327 + | putative oxidoreductase subunit mglC 2290408 - 2289398 - | methyl-galactoside transporter subunit ; membrane component of ABC superfamily TERM 2970 2290433 - 2290470 + r 100 -8.5 -4.96848 | opp_overlap 2290437 2290439 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGTTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2291944 - 2290424 - | fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components TERM 2971 2291304 - 2291319 + g 78 -7.6 -4.38154 | opp_overlap 2291303 2291304 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGCGAGATAT TERM 2972 2291996 - 2291974 - R 95 -11.3 -3.88232 | TTGGCCATACAATAA GGGCGCAGT AAACG ACTACGCCC AATCAGTCTTATTTC mglB 2293003 - 2292005 - | methyl-galactoside transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2973 2292106 - 2292122 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAGATCA galS 2294360 - 2293302 - | DNA-binding transcriptional repressor yeiB 2295625 - 2294468 - | conserved hypothetical protein; putative inner membrane protein TERM 2974 2294855 - 2294837 - G 77 -3 -5.07486 | overlap 2294838 GAGCTGCAATAAAAA CGCGCACC AGC GATACGCC CAGTCCAGTCGCCAC TERM 2975 2295528 - 2295558 + g 71 -9.1 -3.44848 | gap 1, opp_overlap 2295531 2295532, overlap 2295526 2295532 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAAC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 2976 2295555 - 2295531 - G 78 -10.8 -3.51924 | gap 1, opp_overlap 2295528 2295526 2295532, overlap 2295532 GCGGGATTGAGATAA GCCGCCTTTGG TAAC CCAAAGGCG-C TGATGTTTAATAGCA TERM 2977 2295532 - 2295555 + g 71 -11 -2.87501 | opp_overlap 2295531 2295532, overlap 2295528 2295526 CGGGATTGAGATAAG CCGCCTTTGG TAAC CCAAAGGCGC TGATGTTTAATAGCA TERM 2978 2295555 - 2295532 - G 70 -11 -2.7094 | opp_overlap 2295528 2295526 2295532, overlap 2295531 CGGGATTGAGATAAG CCGCCTTTGG TAAC CCAAAGGCGC TGATGTTTAATAGCA folE 2296310 - 2295642 - | GTP cyclohydrolase I TERM 2979 2296856 - 2296869 + G 70 -3.7 -4.70583 | ACGGCTACGATTTAG GCCAG GGCG CAGGC TTTTATCTTAATGCC frmC 2296567 - 2297403 + | S-formylglutathione hydrolase TERM 2980 2297408 - 2297425 + T 95 -12.7 -3.27475 | opp_overlap 2297405 2297406, overlap 2297406 TACTGAAGTAAAGTC TGCCCGG TTCG CCGGGCA TCTTCTCATCAGAAG cirA 2299413 - 2297434 - | ferric iron-catecholate outer membrane transporter TERM 2981 2297795 - 2297816 + g 72 -5.9 -4.30448 | overlap 2297808 TAGTTGAGTGACAGT TTCCATTCA TCGT TGAACGGAA TTTTCAGTTCGGTTT TERM 2982 2299674 - 2299655 - R 100 -13.6 -5.54338 | opp_overlap 2299655 TAAGGAAAAGAAAAA GCCCTCTC GGTT GAGAGGGC TTCGTTAGGAAGGGG TERM 2983 2299655 - 2299674 + r 100 -13.6 -3.33696 | opp_overlap 2299655 TAAGGAAAAGAAAAA GCCCTCTC GGTT GAGAGGGC TTCGTTAGGAAGGGG lysP 2301165 - 2299696 - | lysine transporter yeiE 2302203 - 2301334 - | putative DNA-binding transcriptional regulator TERM 2984 2303000 - 2302974 - g 75 -6.6 -4.42386 | CCCGGATGCAGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 2985 2303272 - 2303254 - g 71 -2.2 -5.00884 | AGCGCGCTGAAAAAA GCCGGGGC AAA ACCTCTGC TGATGGCACTGGTAC yeiH 2302303 - 2303352 + | conserved hypothetical protein; putative inner membrane protein nfo 2303426 - 2304283 + | endonuclease IV with intrinsic 3'-5' exonuclease activity yeiI 2304287 - 2305375 + | putative kinase TERM 2986 2305420 - 2305379 - T 76 -10.3 -3.02829 | gap 1, opp_overlap 2305377, overlap 2305382 CAGATGGCCTGAATA TG-ATGCCGGATACGACGCT TAG AATGTCTTATCCGGCATACA AATTGTGCACTACGC TERM 2987 2305416 - 2305382 - T 83 -12.2 -2.73994 | opp_overlap 2305377, overlap 2305379 ATGGCCTGAATATGA TGCCGGATACGACGCT TAG AATGTCTTATCCGGCA TACAAATTGTGCACT yeiJ 2306680 - 2305430 - | putative sodium/proton nucleoside transporter TERM 2988 2305884 - 2305864 - G 70 -9.8 -3.23899 | overlap 2305859 CGTTAATCAACGCAA TGATGGCA ACAAA TGCCATCA CCACTGTCGCCACAC TERM 2989 2305891 - 2305908 + g 70 -6.9 -4.08216 | ATGCCATCACCACTG TCGCCAC ACCT GCGGCGA TTTTCAGCCCGGTCA EFER_2247 2306810 - 2306694 - | hypothetical protein TERM 2990 2306766 - 2306735 - GR 73 -8.6 -3.57406 | opp_overlap 2306735, overlap 2306733 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCAGC TTGTTATCAACACTT rihB 2307721 - 2306780 - | ribonucleoside hydrolase 2 TERM 2991 2306857 - 2306834 - GH 70 -9.6 -2.83747 | opp_overlap 2306834, overlap 2306831 TAATCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTGGTATTGGCGGG TERM 2992 2306834 - 2306857 + gH 100 -11.8 -3.92324 | opp_overlap 2306834 2306831 TAATCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTGGTATTGGCGGG TERM 2993 2307086 - 2307101 + gH 75 -10.4 -2.79878 | overlap 2307085 GCTGAACAACTCTCC GGCAGG GCCG CCTGCC CTTTCCATCCGTGCA TERM 2994 2307928 - 2307954 + G 71 -2.1 -5.02074 | opp_overlap 2307928, overlap 2307933 2307944 TTGCTTTTCAACGGA TGTTTCAGCCG ATGCA CGGCTGTTTCA TTTTTTAGCACGTGA TERM 2995 2307933 - 2307949 + G 86 -9.4 -4.42765 | opp_overlap 2307928, overlap 2307928 2307944 TTTCAACGGATGTTT CAGCCG ATGCA CGGCTG TTTCATTTTTTAGCA TERM 2996 2307992 - 2308006 + G 76 -7.8 -4.18018 | overlap 2307944 GTGCAGGAAGGGCAA CAGCCG TTA TGGCTG TTTTACCTGACGCGA TERM 2997 2308012 - 2308033 + G 73 -11.5 -2.72043 | overlap 2308011 GTTATGGCTGTTTTA CCTGACGCG AGGC CGCGCCAGG CTTTACGCCACGCTT yeiL 2307890 - 2308549 + | DNA-binding transcriptional activator of stationary phase nitrogen survival yeiM 2309868 - 2308618 - | putative sodium/proton nucleoside transporter TERM 2998 2309079 - 2309096 + g 70 -6.9 -4.08216 | ACGCCATTACCACCG TCGCCAC ACCA GCGGCGA TTTTCAACCCGGTCA TERM 2999 2309358 - 2309404 + g 70 -6.7 -4.07568 | gap 1, overlap 2309361 CGGTAAACAACTCGT TGCGATTCATGCGATCGATAAA CGGT TTTA-CGATCGCCGGGATCTCA TTTTGCCCAAGGAAA TERM 3000 2309779 - 2309794 + g 81 -4.7 -5.10461 | TGCAGCTCCGACCGT GCGTA CGCTGA TACGC TTTTTATTCACTGAC TERM 3001 2309856 - 2309873 + g 75 -5.7 -4.58773 | TACCCACCAAACTTC TCATTAT ATCC ATAATGA TTTTCCTTTCATGCC TERM 3002 2309912 - 2309895 - R 86 -10.5 -3.74693 | opp_overlap 2309883 2309895 TTTCATGCCAGTAAA CCCGGCG CAAG CGCCAGG TTTCGGTATGTATGA TERM 3003 2309895 - 2309912 + r 75 -8.3 -3.75535 | opp_overlap 2309895, overlap 2309883 TTTCATGCCAGTAAA CCCGGCG CAAG CGCCAGG TTTCGGTATGTATGA yeiN 2310900 - 2309962 - | hypothetical protein TERM 3004 2310001 - 2310013 + g 73 -9.1 -3.61517 | opp_overlap 2310009 TTTGGCAATTTCGCT CGCCA GAA TGGCG TTGTTGAACACCAGT TERM 3005 2310567 - 2310577 + g 75 -5.4 -4.65895 | opp_overlap 2310550 2310549 2310565 2310564, overlap 2310565 TCGTTGAAGCAACGG TGGT CGC ACCA TTTTTCCCTGCGGCA yeiC 2311934 - 2310888 - | putative kinase TERM 3006 2312236 - 2312217 - R 100 -13.6 -4.57516 | ACAGGGAAAGGAAAA GGGCAGAG AAGA CTCTGCCC TGATGATGAAGAGGA fruA 2313980 - 2312253 - | fused fructose-specific PTS enzymes: IIBcomponent ; IIC components TERM 3007 2313260 - 2313245 - GR 76 -6.8 -4.41114 | overlap 2313248 2313257 GCAGCATATAAGAAA CACCCG TCAA CAGGTG ACGATAGGCGCCAGC fruK 2314893 - 2313955 - | fructose-1-phosphate kinase fruB 2316023 - 2314893 - | fused fructose-specific PTS enzymes: IIA component ; HPr component TERM 3008 2315234 - 2315246 + g 78 -7.7 -4.30719 | opp_overlap 2315239 CTGAATCTGCTTTCA GCAGA CGA TCTGC TTTGTTATCGAGCAG TERM 3009 2316391 - 2316401 + G 77 -8.2 -4.08485 | CCCCTGCTGTCTCCA CGCC TAA GGCG TTTGATTTGACTGCC TERM 3010 2316509 - 2316526 + G 74 -2.6 -5.04249 | opp_overlap 2316502, overlap 2316503 GGATGAAGTCCATGC CCGGCC TGGTAT GGTTGG TTTCTTTTTTACCGG setB 2316288 - 2317547 + | lactose/glucose efflux system yeiW 2317798 - 2317544 - | hypothetical protein yeiP 2317955 - 2318527 + | putative translation elongation factor TERM 3011 2318565 - 2318594 + T 100 -9.3 -4.59109 | overlap 2318567 GCGGCGCAGGCTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 3012 2318567 - 2318592 + T 100 -16.3 -3.90762 | overlap 2318565 GGCGCAGGCTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG insG 2319904 - 2318576 - | putative IS4 transposase; KpLE2 phage-like element TERM 3013 2319937 - 2319912 - H 100 -13.4 -5.61596 | opp_overlap 2319912 ATGTGCATAAAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3014 2319912 - 2319937 + H 100 -13.4 -3.61398 | opp_overlap 2319912 ATGTGCATAAAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 3015 2319991 - 2320003 + H 82 -3.3 -5.4756 | overlap 2319990 CTGATCGGCATTACG GCGCA GGC TGCCC TTTTTTATTAAACTT yeiQ 2320154 - 2321629 + | putative sugar dehydrogenase, NAD-dependent TERM 3016 2321647 - 2321671 + F 71 -10 -2.71937 | opp_overlap 2321647, overlap 2321644 2321643 ATTTCTGCGGTATAA GCGGGTGATC CCTCT GGTTACCCGC TCAGTTCTTCTCTTT TERM 3017 2322592 - 2322606 + G 72 -8.6 -3.76373 | opp_overlap 2322592 TCTGGTACGGATTAA TCGTCA GGG TGACGA TTTGCATATTGAAAC yeiR 2321741 - 2322733 + | putative enzyme yeiU 2322770 - 2323483 + | undecaprenyl pyrophosphate phosphatase TERM 3018 2323502 - 2323532 + F 100 -15 -4.14257 | opp_overlap 2323500 2323498 ACAGTGATTAACATG TTCATCAGGATTTA AAA TGAATCCTGATGAA TTTATCCTTATTCCG spr 2323897 - 2324463 + | putative peptidase, outer membrane lipoprotein TERM 3019 2324511 - 2324528 + F 100 -9.1 -5.72622 | opp_overlap 2324511 GACGAGAACATTAAA GCACTGC TTCG GCGGTGC TTTTTTGTTTCTGCC EFER_2266 2324646 - 2326202 + | Rtn protein TERM 3020 2326774 - 2326749 - g 83 -9.7 -4.03234 | opp_overlap 2326749 CGTCTGGTATACAAA GGCACGACGGT AAAA ACCATCGCACC TCTTACAGTACGTTT TERM 3021 2327259 - 2327272 + G 70 -3.8 -4.68645 | opp_overlap 2327259 CGTCGTGTACGAGAA GCCA TCACCC TGGC TTTTGATTTTGAATG TERM 3022 2327415 - 2327427 + G 74 -7.7 -4.0896 | opp_overlap 2327414 2327415 CCAATGAAAAAAGAT CTTCC CCC GGAAG TTTTCACCCAAATTT TERM 3023 2327601 - 2327623 + G 81 -10.6 -3.56836 | opp_overlap 2327610 CTTGTTCCTTCCAGC GGCAATAACC AAT GGATATTGCC TTTCCAGCATAGTTT yejA 2326239 - 2328095 + | putative oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily transporter TERM 3024 2328783 - 2328811 + G 91 -11.7 -4.08767 | opp_overlap 2328781 CTCTGGCACATTACC CTGCCAGTCACAG CTA CCGTGATTGGCGG TTTTGCCACACTGAC yejB 2328096 - 2329190 + | putative oligopeptide transporter subunit; permease component of ABC superfamily yejE 2329190 - 2330215 + | putative oligopeptide transporter subunit ; permease component of ABC superfamily transporter TERM 3025 2331673 - 2331689 + GT 83 -10.9 -3.48772 | TCATCAGCCATGATC TGCACGT GGT ACGTGCA TTATGTCACCAGGTT yejF 2330169 - 2331806 + | putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components yejG 2332172 - 2331810 - | hypothetical protein TERM 3026 2332449 - 2332468 + r 78 -10.6 -3.25459 | opp_overlap 2332450, overlap 2332447 2332450 GATATGCATCAACAA AGGGGGCC TTAC GGCCCCCA TATTGTGCAATTGAT TERM 3027 2332450 - 2332467 + r 93 -14.1 -2.54794 | opp_overlap 2332450, overlap 2332449 2332447 ATATGCATCAACAAA GGGGGCC TTAC GGCCCCC ATATTGTGCAATTGA TERM 3028 2332467 - 2332450 - R 100 -14.1 -4.26202 | opp_overlap 2332449 2332447 2332450 ATATGCATCAACAAA GGGGGCC TTAC GGCCCCC ATATTGTGCAATTGA bcr 2333673 - 2332483 - | bicyclomycin/multidrug efflux system rsuA 2334396 - 2333701 - | 16S rRNA pseudouridylate 516 synthase yejH 2334545 - 2336305 + | putative nucleic acid ATP-dependent helicase rplY 2336430 - 2336714 + | 50S ribosomal subunit protein L25 TERM 3029 2336751 - 2336736 - T 71 -4.6 -4.64144 | opp_overlap 2336739, overlap 2336738 AATAAGTTGTAAAAA TACCGC GCAG GCGGAA GTACTGTTTGAGCGT TERM 3030 2336749 - 2336738 - T 72 -7.2 -3.92577 | opp_overlap 2336739, overlap 2336736 TAAGTTGTAAAAATA CCGC GCAG GCGG AAGTACTGTTTGAGC TERM 3031 2336817 - 2336800 - T 100 -12.7 -4.77438 | opp_overlap 2336800 ATTCAGTACTAAAAA GCTCCCG ATTT CGGGAGC TTTTTTATTGTTTCT TERM 3032 2336800 - 2336817 + T 100 -12.7 -5.74288 | opp_overlap 2336800 ATTCAGTACTAAAAA GCTCCCG ATTT CGGGAGC TTTTTTATTGTTTCT EFER_2276 2337796 - 2336912 - | putative hydrolase or acyltransferase yejK 2339121 - 2338117 - | nucleotide associated protein TERM 3033 2338931 - 2338919 - G 71 -9.1 -3.53012 | CCCTGCCGCTGCAAA CGCAG AGC CTGCG CCAGTTCACTCTCTT yejL 2339303 - 2339530 + | hypothetical protein TERM 3034 2340057 - 2340038 - g 77 -7.1 -4.58395 | opp_overlap 2340042 TGGAGCTGGCAAAAA CTGCGCA GCCTGA CGCGCAG ACGGCATTTCGCCAA TERM 3035 2340709 - 2340684 - g 72 -8.3 -3.82218 | overlap 2340686 2340687 AGTCAGACGAGCAAA CAGCCAGCCAA TGGA TCAACTGGCTG GGGCGCTACGCACAG yejM 2339561 - 2341321 + | putative hydrolase, inner membrane-associated TERM 3036 2341312 - 2341343 + F 87 -8.2 -4.42788 | gap 1, overlap 2341312 2341313 2341341 CGAAAAACGTTTTAT C-GCTAACTGATTTA TAA TTAATCAGTTAGCCG TTTTCTCCCCTTGCA TERM 3037 2341313 - 2341341 + F 81 -11.9 -2.54632 | overlap 2341312 2341312 GAAAAACGTTTTATC GCTAACTGATTTA TAA TTAATCAGTTAGC CGTTTTCTCCCCTTG TERM 3038 2341505 - 2341488 - f 79 -7 -4.70613 | opp_overlap 2341488, overlap 2341477 AAAATCCCAAGAAAA CCAACC CATTGC GGTTGG TTTTTTTATGCCTGT TERM 3039 2341488 - 2341505 + F 100 -7 -5.65177 | opp_overlap 2341488 2341477 AAAATCCCAAGAAAA CCAACC CATTGC GGTTGG TTTTTTTATGCCTGT TERM 3040 2342201 - 2342188 - g 100 -5.2 -5.54264 | overlap 2342198 AAAGACGGAAAAAAA GCCC GTAAAG GGGC CAAAGTTGGCGCAAC EFER_2281 2341945 - 2342322 + | conserved hypothetical protein; putative exported protein ymgD 2342326 - 2342658 + | hypothetical protein TERM 3041 2342672 - 2342695 + F 88 -9.6 -4.30014 | AACAGACTTGTTCTG CCGGGCTT TGGTAATT AAGCCCGG TTTTGCATTAATAGC narP 2342911 - 2343561 + | DNA-binding response regulator in two-component regulatory system with NarQ or NarX TERM 3042 2343596 - 2343570 - T 100 -7.3 -5.94214 | gap 1, opp_overlap 2343572, overlap 2343572 AATATAATAAAAAAA TAGCCCGAT-GG ATTT CCTATCGGGCTT GTTCTTATTTACTCT TERM 3043 2343594 - 2343572 - T 100 -9.9 -4.57921 | gap 1, opp_overlap 2343572, overlap 2343570 TATAATAAAAAAATA GCCCGAT-GG ATTT CCTATCGGGC TTGTTCTTATTTACT TERM 3044 2343572 - 2343594 + T 100 -11.3 -4.16937 | opp_overlap 2343570 2343572 TATAATAAAAAAATA GCCCGATGG ATTTC CTATCGGGC TTGTTCTTATTTACT ccmH 2344653 - 2343601 - | heme lyase, CcmH subunit TERM 3045 2344660 - 2344648 - G 77 -3.3 -5.07486 | CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT ccmG 2345207 - 2344650 - | periplasmic thioredoxin of cytochrome c-type biogenesis ccmF 2347147 - 2345204 - | heme lyase, CcmF subunit ccmE 2347623 - 2347144 - | periplasmic heme chaperone TERM 3046 2347532 - 2347518 - G 84 -4.2 -5.24129 | overlap 2347520 CCGGCGTATAAAAAA GATCGA TAT TCGAGC GCAGCGCATACAACA ccmD 2347829 - 2347620 - | cytochrome c biogenesis protein TERM 3047 2347787 - 2347776 - G 95 -7.2 -5.38047 | CAGCCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2348563 - 2347826 - | heme exporter subunit ; membrane component of ABC superfamily TERM 3048 2347983 - 2347948 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2347948 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2349267 - 2348605 - | heme exporter subunit ; membrane component of ABC superfamily TERM 3049 2348736 - 2348720 - G 72 -10.8 -3.11732 | GGCAAATGCATCGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG TERM 3050 2348856 - 2348846 - G 70 -5.4 -4.42386 | overlap 2348850 2348851 GGTGCACCGAGAAAA CCAA GCG TTGG GGTTCCCAGCAGCAG ccmA 2349887 - 2349264 - | heme exporter subunit ; ATP-binding component of ABC superfamily napC 2350504 - 2349902 - | nitrate reductase, cytochrome c-type,periplasmic TERM 3051 2350454 - 2350417 - G 70 -9.7 -3.19848 | opp_overlap 2350441, overlap 2350415 2350420 CAAAACCGATCAACA GCAGCGTACCCAGCGCC AGAC GGCTGGGGGTACGCCAC CATTTCCACAGGCGC napB 2350963 - 2350514 - | nitrate reductase, small, cytochrome C550 subunit, periplasmic napH 2351823 - 2350960 - | ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) TERM 3052 2351300 - 2351286 - G 88 -11.4 -3.80174 | ACAGCGCGAGAATAA GCAGCG CAC CGCTGC CGAATCCCATTACCA napG 2352505 - 2351810 - | ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) napA 2354998 - 2352512 - | nitrate reductase, periplasmic, large subunit TERM 3053 2354592 - 2354608 + g 79 -3.7 -5.10461 | TCCGGCCCTTTTTCT TTCAGGG CAG TCTTGAA TTTTTCTTCCATCAC napD 2355258 - 2354995 - | assembly protein for periplasmic nitrate reductase napF 2355742 - 2355248 - | ferredoxin-type protein, putative role in electron transfer to periplasmic nitrate reductase (NapA) eco 2356147 - 2356635 + | ecotin, a serine protease inhibitor TERM 3054 2356967 - 2356954 - g 100 -4.5 -6.11243 | gap 1, overlap 2356955 2356957 ATCGAACAAAAAAAA GCAGCC TAT GGC-GC ACTGGCAGATGTGCT ybiO 2356816 - 2359041 + | hypothetical protein ybiN 2359964 - 2359038 - | putative AdoMet-dependent methyltransferase TERM 3055 2360257 - 2360247 - g 71 -3.2 -4.77036 | TGTCATTATGAAAAA GTGC CTC ACAC TACTGATTGCCACCG TERM 3056 2360431 - 2360413 - g 71 -3 -4.86033 | overlap 2360414 AAACTGGCAGAAAAA GCGCGC GAACAAG GCGCGA AAGGTTATGTCATTA ybiM 2360095 - 2360499 + | hypothetical protein TERM 3057 2360514 - 2360535 + F 73 -7.3 -4.23434 | opp_overlap 2360514 ACCCCACCAACGTAA CTGCATTCG CCTC TGGATGCAG TTTTCGCCTGTTTTG TERM 3058 2360581 - 2360562 - f 75 -2.2 -5.26875 | TTTGTAATCAAAAAA CATCAAAT ATGA ACTTAATG TAAATAAATGTATTT TERM 3059 2360669 - 2360624 - f 95 -9.4 -4.52857 | ATGGGTGATAGAAAA TCGCGCCAAGTGATAAT-GCTT ATCA AAACTATTATCACTT-GCACGA ACGCTATCACGGGAT TERM 3060 2361054 - 2361072 + G 87 -4.4 -5.1861 | overlap 2361058 CGATGCGCTCAAAAA CGTCCCCG GAG TGGGTGCG TTTTTTGCTGGTGAG TERM 3061 2361105 - 2361115 + G 70 -6.8 -4.0371 | CGGTAACTCCACCAC TGGC GAC GCCA TTTATATGCGCGGTG TERM 3062 2361437 - 2361422 - g 71 -2.4 -5.02074 | TGATGGGTGAAAAAA CGCACG ATGC CGGACG CGACAAAGTTAAAAA TERM 3063 2362216 - 2362191 - g 70 -11.1 -2.76964 | opp_overlap 2362209, overlap 2362188 2362186 2362193 TCATACTGAATATGA CAGTGCCACCG CCTG CGGCGGCAGTG GCCGAGGTGCCGTTA TERM 3064 2362389 - 2362377 - g 72 -10.5 -3.01712 | TGCCGTTTCCCAACA GCCGC CGG GCGGC AACAACTTCGCCCTT TERM 3065 2362479 - 2362459 - g 70 -3.9 -4.70879 | TTTAAACCGCAAAAA GCCAACACC AGC GAGATTGGC ACCAAATGGCAGGTT fiu 2360764 - 2363046 + | putative TonB-dependent iron outer membrane transporter TERM 3066 2363054 - 2363071 + F 100 -12.7 -4.58283 | ATTTCTGATTCAGAT GTGGGGC GCAG GCCCCAC TTTTTGGAGAACTTG ybiX 2363088 - 2363765 + | conserved hypothetical protein with PKHD hydroxylase domain ybiI 2363839 - 2364105 + | hypothetical protein TERM 3067 2364320 - 2364305 - f 81 -4 -5.40072 | overlap 2364306 TCTCTCGTAAAAAAA CGTGAT ACTC ATCACA TCGACGAAACAACGT TERM 3068 2364497 - 2364479 - g 71 -3.1 -4.79657 | AGAACATGAAGAAAA TCGGC GTGGTTTCT GCCGA TGGTGCATCCACCCT ybiJ 2364370 - 2364630 + | hypothetical protein TERM 3069 2364742 - 2364763 + T 100 -13.7 -6.38039 | ATGTTACCCTTGTTT GCCCGTCCG TCAC TGGACGGGC TTTTTTTTTTAGCTG ybiC 2365857 - 2364772 - | putative hydroxyacid dehydrogenase TERM 3070 2365986 - 2365963 - R 100 -12.5 -4.07568 | TGCGGTGGGGTAAAA GCCGGATGA CGTGGC TCATCCGGC TGAGATAAAAATTAA ybiB 2366960 - 2365998 - | putative transferase/phosphorylase TERM 3071 2366932 - 2366905 - G 71 -9.1 -3.53444 | gap 1, opp_overlap 2366882 2366903 2366901 2366905 GTATCCCGGTCTAAA TCGCGCGCGTGG TTTTT CC-CGCGCCCGA TCTCTTTAATGATTT TERM 3072 2367005 - 2366992 - R 74 -9.5 -3.25223 | opp_overlap 2366988 GACTCACATCATTAA CGCCG CCGA CGGCG TGGGGATTTCGTTTT dinG 2369138 - 2366988 - | ATP-dependent DNA helicase TERM 3073 2367687 - 2367698 + g 75 -7.2 -4.32857 | opp_overlap 2367687 ATCCAGCGCCACAAA GCGG TCAC CCGC TTTCTCTTTCAGCCC TERM 3074 2368883 - 2368906 + g 100 -8.8 -5.27779 | GATCCTGCAACGCCA CGTTGGCGGT ACTC ACCACCAGCG TTTTTTGCTCTTCGC ybiA 2369258 - 2369740 + | hypothetical protein TERM 3075 2369852 - 2369821 - T 78 -10 -3.53012 | opp_overlap 2369831, overlap 2369822 GTGCTTGTTGTGAAA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACAAAAGCATGCAA TERM 3076 2369851 - 2369822 - T 93 -13.5 -2.71712 | opp_overlap 2369831, overlap 2369821 TGCTTGTTGTGAAAT GCCGGATGCGGCG TAAA CGCCTTATCCGGC CTACAAAAGCATGCA rhlE 2371336 - 2369972 - | RNA helicase TERM 3077 2371552 - 2371529 - H 80 -9.8 -3.60792 | AGGATGGAGACATAA TCTTAATCAA TCAT TTGATTAAGA ATGGACTGTGCGATG TERM 3078 2371622 - 2371610 - g 81 -4.8 -5.09173 | opp_overlap 2371618 2371620 GAACAGGCTAAAAAA CAGC TGATT GCTG CCGCACTGGCGCAGT ybiH 2371565 - 2372236 + | putative DNA-binding transcriptional regulator TERM 3079 2372715 - 2372685 - g 81 -9.6 -4.13304 | AAACGACCTGGAAAA TGCCCGCTCCTCGC GCG ACCAGGCGCAGGCA ACGCTGAAATCAGCA TERM 3080 2373118 - 2373104 - g 70 -7 -4.1196 | opp_overlap 2373105, overlap 2373105 2373113 AATTTACCCCGAAAA CCGTCG AAA CGCCGG ATCTGCGTACCGACC ybhG 2372236 - 2373234 + | putative membrane fusion protein (MFP) component of efflux pump, membrane anchor; UPF0194 family TERM 3081 2373470 - 2373448 - g 78 -5.4 -4.7373 | opp_overlap 2373451 2373464, overlap 2373449 2373451 TGATCCGATCAAAAA CGACGGCGCG CTG CACGCCGTTC TCGGCTATATGCCGC TERM 3082 2373467 - 2373451 - g 80 -11.5 -3.28472 | opp_overlap 2373451 2373464, overlap 2373449 2373448 TCCGATCAAAAACGA CGGCGCG CTG CACGCCG TTCTCGGCTATATGC TERM 3083 2374563 - 2374548 - g 85 -3.2 -5.32944 | CGCAGAACGAAAAAA TCACCC GTAT GAGCGA GGCATTTGGCCTGAA ybhF 2373227 - 2374963 + | putative transporter fused subunits of ABC superfamily: ATP-binding components ybhS 2374956 - 2376089 + | putative transporter subunit: permease component of ABC superfamily TERM 3084 2376274 - 2376240 - g 70 -10 -3.22091 | ACTGGAAGTGACCAA CGCCACCATCGCCATC TAC GATGAAGATAACGGCG AGCATTCGGTGGAGC ybhR 2376100 - 2377206 + | putative transporter subunit: permease component of ABC superfamily ybhQ 2377578 - 2377168 - | conserved hypothetical protein; putative inner membrane protein TERM 3085 2377271 - 2377233 - G 72 -10.2 -3.29704 | overlap 2377229 2377231 2377236 TCGCCAGTAAAGACA CTACTGCCGGGCCAGCAA GGA TCGCCAGCCCTGCAATCG CCAGCAAAAAGTTGT TERM 3086 2377268 - 2377236 - G 70 -10.5 -2.82279 | overlap 2377229 2377233 2377231 CCAGTAAAGACACTA CTGCCGGGCCAGCAA GGA TCGCCAGCCCTGCAA TCGCCAGCAAAAAGT TERM 3087 2378419 - 2378382 - g 77 -6.2 -4.62783 | gap 1, overlap 2378383 2378384 GATCTACGTCAAAAA TGC-CAGCGCCAGCGCG CCAAC CGCGTTGCCGCTGCGGA CATGGCGACACCTTT ybhP 2377711 - 2378472 + | putative metal-dependent hydrolase ybhO 2378469 - 2379710 + | cardiolipin synthase 2 TERM 3088 2379961 - 2379947 - g 72 -7.8 -3.86015 | opp_overlap 2379954 2379956, overlap 2379956 TACTGCGGTCATAAA CTGGCA AAA CGCCAG GTCATGCTGGTGTCG ybhN 2379710 - 2380666 + | conserved hypothetical protein; putative inner membrane protein EFER_2321 2380933 - 2380670 - | conserved hypothetical protein, Putative cytoplasmic protein (fragment) EFER_2322 2381273 - 2380905 - | hypothetical protein ybhM 2382141 - 2381320 - | conserved hypothetical protein; putative inner membrane protein TERM 3089 2382224 - 2382196 - R 77 -8.2 -3.95324 | gap 1, overlap 2382199 TATTTTGAATAAGAA TC-AGGGAGCACC TGAC GATGCTCCCCAGA CATTAATTTACAGCG TERM 3090 2382220 - 2382199 - R 93 -12.3 -3.03309 | overlap 2382196 TTTGAATAAGAATCA GGGAGCACC TGAC GATGCTCCC CAGACATTAATTTAC EFER_2324 2383893 - 2382232 - | putative transmembrane protein (N-terminal); phosphatase (C-terminal) TERM 3091 2384236 - 2384218 - R 100 -10.3 -5.4492 | TATACAGATAAAAAA TCCCGAC TACGG GTCGGGA TTCAACGCAAGTAAA ybhL 2384960 - 2384256 - | conserved hypothetical protein; putative inner membrane protein TERM 3092 2384980 - 2385000 + r 75 -10.5 -2.87146 | opp_overlap 2384980, overlap 2384979 2384969 TCCTCCTGGTAGAAA GTGATACGT TAA GCGTATCAC ATTATTCTACCAGCG TERM 3093 2385000 - 2384980 - R 84 -9.8 -3.85698 | opp_overlap 2384979 2384969 2384980 TCCTCCTGGTAGAAA GTGATACG TTAAG CGTATCAC ATTATTCTACCAGCG moaE 2385459 - 2385007 - | molybdopterin synthase, large subunit TERM 3094 2385187 - 2385177 - G 80 -5.4 -4.89852 | TGACACCGACAAAAA CGAT TTC ATCG CCCGGCCATAATTCC moaD 2385706 - 2385461 - | molybdopterin synthase, small subunit moaC 2386184 - 2385699 - | molybdopterin biosynthesis, protein C moaB 2386699 - 2386187 - | molybdopterin biosynthesis protein B moaA 2387710 - 2386721 - | molybdopterin biosynthesis protein A TERM 3095 2387498 - 2387512 + g 75 -5.6 -4.65895 | opp_overlap 2387487, overlap 2387495 2387500 CAAAGACGGCTCTCC GCCCGT CAG ACGGAC TTTTTCGGTACCCAG ybhK 2388107 - 2389015 + | putative transferase with NAD(P)-binding Rossmann-fold domain; UPF0052 family TERM 3096 2389015 - 2389047 + T 77 -10.6 -3.21276 | opp_overlap 2389018 2389022 2389034, overlap 2389018 2389022 ACAGGCATTAGGTTA ACACGAAGCCGGAA GAAAA TTCCGGCTTCGTCA TCTTGTCACGAAGCC TERM 3097 2389044 - 2389018 - T 100 -16.7 -3.07043 | opp_overlap 2389015 2389018 2389022, overlap 2389022 2389034 GGCATTAGGTTAACA CGAAGCCGGAA GAAAA TTCCGGCTTCG TCATCTTGTCACGAA TERM 3098 2389018 - 2389044 + T 100 -16.7 -2.80074 | opp_overlap 2389018 2389022 2389034, overlap 2389015 2389022 GGCATTAGGTTAACA CGAAGCCGGAA GAAAA TTCCGGCTTCG TCATCTTGTCACGAA TERM 3099 2389022 - 2389040 + T 78 -10.3 -3.29381 | opp_overlap 2389022 2389018 2389034, overlap 2389018 2389015 TTAGGTTAACACGAA GCCGGAA GAAAA TTCCGGC TTCGTCATCTTGTCA TERM 3100 2389040 - 2389022 - T 78 -10.3 -3.37245 | opp_overlap 2389018 2389015 2389022, overlap 2389018 2389034 TTAGGTTAACACGAA GCCGGAA GAAAA TTCCGGC TTCGTCATCTTGTCA TERM 3101 2389066 - 2389034 - T 100 -9.2 -4.65747 | opp_overlap 2389022 2389018 2389015, overlap 2389022 2389018 2389060 GAAGCCGGAAGAAAA TTCCGGCTTCGTCA TCTTG TCACGAAGCCGCAA TGAACAGCTCACGCA uvrB 2391074 - 2389053 - | excinulease of nucleotide excision repair, DNA damage recognition component TERM 3102 2390223 - 2390237 + g 72 -5.7 -4.51812 | overlap 2390222 2390232 ACGCTGAGTCAGCCG CTGCT CTTCC AGCAG TTTGTTGTTCTCCAA TERM 3103 2390266 - 2390276 + g 72 -6.8 -4.18294 | AACAGCACTTTGCGT CTGG CGG CCAG TTCTTCTTTAATTTC TERM 3104 2390315 - 2390335 + g 70 -6.7 -4.14739 | CCTGCACAATGCGCT CGCGCGGCG TAA CGTAGTGCG TTTTCGGGTAGATGG TERM 3105 2391168 - 2391149 - R 71 -2.1 -5.16237 | overlap 2391151 AATGCCAGTAAAAAA GACTGGA TAAAAT TCCAGTA GCGCACAACAATATT bioD 2392336 - 2391647 - | dethiobiotin synthetase bioC 2393078 - 2392323 - | putative methltransferase, enzyme of biotin synthesis bioF 2394219 - 2393065 - | 8-amino-7-oxononanoate synthase EFER_2336 2393053 - 2393130 + | hypothetical protein TERM 3106 2394176 - 2394196 + gT 81 -9.6 -3.77302 | AGGGCATCGGCAGTA CGCCGCGC ATCGA GCGCCGCG TTGATTTTCTCCTGC bioB 2395256 - 2394216 - | biotin synthase TERM 3107 2394299 - 2394313 + g 72 -8.5 -3.75461 | GTTGTTCGTTATCGC CCGCC AGCAC GGCGG TTTGCTGCGGATTTA TERM 3108 2395095 - 2395108 + g 70 -5.2 -4.4078 | GTATTTGCAATCTTC CGGG CAAGCA CCCG TTTTAATTGACAGCA bioA 2395343 - 2396632 + | 7,8-diaminopelargonic acid synthase, PLP-dependent ybhB 2396691 - 2397167 + | putative UPF0098 class protein TERM 3109 2397174 - 2397200 + F 93 -13.8 -2.53759 | opp_overlap 2397171, overlap 2397179 2397181 TTTAGTTAATCACTC TGCCAGATGGCG CTA TGCCATCTGGTA TCACTTAAAGGTATT ybhC 2397319 - 2398602 + | pectin methylesterase TERM 3110 2398703 - 2398727 + T 100 -12.2 -4.36914 | opp_overlap 2398703, overlap 2398724 ATAAGCGTTAAAAAA GGGTCGCTAT ATTGC ATAGCGGCCC TTTTATCCAAAGAGC TERM 3111 2398727 - 2398703 - T 100 -10.7 -5.06103 | opp_overlap 2398703 2398724 ATAAGCGTTAAAAAA GGGTCGCTATA TTG CATAGCGGCCC TTTTATCCAAAGAGC pgl 2399742 - 2398747 - | 6-phosphogluconolactonase ybhA 2399909 - 2400727 + | putative phosphatase TERM 3112 2400715 - 2400735 + T 100 -15.5 -3.29263 | overlap 2400703 2400701 CCAGTTTATTTACAG CCGCCTGAT TTG ATCAGGCGG TTATCGACACACTCT modC 2401786 - 2400728 - | molybdate transporter subunit ; ATP-binding component of ABC superfamily modB 2402478 - 2401789 - | molybdate transporter subunit ; membrane component of ABC superfamily modA 2403254 - 2402478 - | molybdate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3113 2402956 - 2402969 + g 87 -4.5 -5.24129 | AGAGTTTCACGTGTG GCCGT ATCG ATGGC TTTTTTATCGACGGC TERM 3114 2403387 - 2403370 - R 100 -9.8 -4.56736 | AGGGAATAATGAAAA CGCCCG ACTGAG CGGGCG TTAAGGGAAAATCAA EFER_2347 2403650 - 2403399 - | putative outer membrane or exported modE 2403677 - 2404465 + | DNA-binding transcriptional dual regulator modF 2404533 - 2406005 + | fused molybdate transporter subunits of ABC superfamily: ATP-binding components TERM 3115 2406778 - 2406761 - g 70 -4.1 -4.60041 | gap 1, overlap 2406762 2406763 ACCGATCTGCAAAAA GC-CCAGC CGG ACTGGAGC ATTGCCCTGCTGCGC TERM 3116 2407028 - 2407013 - g 77 -6.1 -4.65895 | GTGGCGATGGAAAAA CTGGC GAACAA GCCAG GCGTACACATCTACA galE 2406266 - 2407282 + | UDP-galactose-4-epimerase TERM 3117 2407505 - 2407489 - g 81 -6.5 -4.8667 | overlap 2407490 GACAGGCGATAAAAA CCCCGAT TAC ACCGGGA CTTACGTTTTCACTA galT 2407292 - 2408338 + | galactose-1-phosphate uridylyltransferase galK 2408342 - 2409490 + | galactokinase galM 2409484 - 2410524 + | galactose-1-epimerase (mutarotase) TERM 3118 2410531 - 2410547 + F 88 -10.1 -4.14004 | opp_overlap 2410526 GCTGAATAACTTTAA GCCCTCG TAA TGAGGGC TTTATCCTTATATTG TERM 3119 2410859 - 2410844 - g 90 -9 -4.45664 | GTAAGCGAAGCAAAA GCAGCT GGTA AGCTGC TGAAAGAGGAAGGTT TERM 3120 2411037 - 2411027 - g 78 -8.2 -4.1552 | CAGGGTCTGAACAAA GCGG AAA CCGC TGAAAAATATGGTGA gpmA 2410727 - 2411479 + | phosphoglyceromutase 1 EFER_2355 2411552 - 2411457 - | hypothetical protein TERM 3121 2411532 - 2411498 - G 74 -5.8 -4.57569 | opp_overlap 2411498 2411505, overlap 2411505 TCATTCGCTTAAAAA TGAGAAAGCCGACT GCAATTG AGTCGGCTTTTTTA TCGCTTACAATGGAG TERM 3122 2411525 - 2411505 - G 78 -8.3 -4.2687 | opp_overlap 2411505 2411498, overlap 2411498 CTTAAAAATGAGAAA GCCGACT GCAATTG AGTCGGC TTTTTTATCGCTTAC TERM 3123 2411505 - 2411525 + g 100 -8.3 -5.31456 | opp_overlap 2411498 2411505, overlap 2411498 CTTAAAAATGAGAAA GCCGACT GCAATTG AGTCGGC TTTTTTATCGCTTAC aroG 2412672 - 2411620 - | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible TERM 3124 2412809 - 2412797 - H 75 -3.3 -5.16071 | AATTAGCAAGAAAAA CGCCA GAT TGTCG CGAAAAACGAGATCT TERM 3125 2413358 - 2413306 - g 88 -2 -5.5353 | gap 1, opp_overlap 2413323, overlap 2413313 2413314 GATATTAATAAAAAA GTCCAAACCGGTGATGGCATCAACA ATGA TGTTGATACCAAAACCGA-CGGTAC CACCCAGTAACGTTA TERM 3126 2413352 - 2413313 - g 84 -10.8 -3.84644 | opp_overlap 2413323, overlap 2413306 2413314 ATAAAAAAGTCCAAA CCGGTGATGGCATCAACA ATGA TGTTGATACCAAAACCGA CGGTACCACCCAGTA TERM 3127 2413351 - 2413314 - g 78 -12.1 -2.8916 | opp_overlap 2413323, overlap 2413313 2413306 TAAAAAAGTCCAAAC CGGTGATGGCATCAACA ATGA TGTTGATACCAAAACCG ACGGTACCACCCAGT ybgS 2412988 - 2413368 + | hypothetical protein TERM 3128 2413391 - 2413408 + F 100 -7 -5.98675 | AAGTAGCCAATATTG GGAGAG CGGAGT CTCTCC TTTTTTATTTTTCTC TERM 3129 2413771 - 2413782 + G 70 -4.4 -4.53034 | ATGCTATTGCTCTGG TGGT GATT ACCA TTTTGATTGTCTGGG TERM 3130 2414278 - 2414296 + G 74 -10.4 -3.55447 | opp_overlap 2414290 ACGATCACGACGCGT TGTTGGAT CAG ATCCAACA TTATCTGATGGATCA zitB 2413482 - 2414417 + | zinc efflux system TERM 3131 2414423 - 2414453 + T 100 -15.5 -3.15544 | TCATCATTAATGGGA CAGCGCGCGTGAA CCTCT TTCGCGTGCGCTG TTGATCCACATCCGG pnuC 2415133 - 2414414 - | nicotinamide mononucleotide transporter nadA 2416214 - 2415171 - | quinolinate synthase, subunit A TERM 3132 2416458 - 2416490 + r 74 -9.9 -3.19463 | opp_overlap 2416459 2416467, overlap 2416459 2416467 GAGAGATGCCTGAAT AGCAAAAAAGCGCCT TTA GGGCGCTTTTTTACA TTGGTGGGTCGTGCA TERM 3133 2416489 - 2416459 - R 100 -14.9 -3.0395 | opp_overlap 2416458 2416459 2416467, overlap 2416467 AGAGATGCCTGAATA GCAAAAAAGCGCC TTTAG GGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 3134 2416459 - 2416489 + r 91 -13.4 -2.51464 | opp_overlap 2416459 2416467, overlap 2416458 2416467 AGAGATGCCTGAATA GCAAAAAAGCGCCT TTA GGGCGCTTTTTTAC ATTGGTGGGTCGTGC TERM 3135 2416481 - 2416467 - R 100 -8.5 -5.27779 | opp_overlap 2416459 2416458 2416467, overlap 2416459 CTGAATAGCAAAAAA GCGCC TTTAG GGCGC TTTTTTACATTGGTG TERM 3136 2416467 - 2416481 + r 100 -9.2 -5.17576 | opp_overlap 2416467 2416459, overlap 2416459 2416458 CTGAATAGCAAAAAA GCGCCT TTA GGGCGC TTTTTTACATTGGTG TERM 3137 2416768 - 2416783 + r 73 -9 -3.40899 | overlap 2416756 GCTCGCCCTACGGGC CGTTGC TGAC GCAACG TTATCCTACACGCTT TERM 3138 2417446 - 2417421 - R 71 -8.4 -3.41051 | opp_overlap 2417418 2417416 2417421 TGATTCGCACGACAA GACCAGAAAT AATGCG ACTTCTGGTC GTGTGTTATGCATTA ybgF 2418250 - 2417459 - | putative RNA binding protein TERM 3139 2418196 - 2418180 - G 100 -15.1 -4.25104 | GGCGCCTGAGCAAAA GCGGCCC AGG GGGCCGC TATGCCAACCAGTAA pal 2418781 - 2418260 - | peptidoglycan-associated outer membrane lipoprotein tolB 2420108 - 2418816 - | periplasmic protein EFER_2365 2421452 - 2420241 - | TolA protein TERM 3140 2420508 - 2420520 + g 71 -2.7 -4.87626 | ATTGATATCCTCGCC TGATG CGC CATTA TTTTTAGTATTACCC TERM 3141 2420631 - 2420649 + g 74 -3 -4.9725 | opp_overlap 2420621 2420623, overlap 2420624 2420623 2420632 2420642 2420642 AATATCATCAGCCTC TGCTGCTT TCT GGGCAGCC TTTTTGTCTGCCGCT TERM 3142 2420655 - 2420679 + g 76 -4.2 -5.00895 | overlap 2420642 2420642 2420657 2420662 CTGGGCAGCCTTTTT GTCTGCCG CTGCTTTTT CGGCAGCC TTTTTCTCTGCTGCG TERM 3143 2420689 - 2420708 + g 85 -2.7 -5.39721 | overlap 2420687 GCAGCCTTTTTCTCT GCTGCGG CTTTCT CGGCGGC TTTTTTCTCTGCTGC TERM 3144 2420719 - 2420741 + g 74 -8.4 -3.8709 | overlap 2420732 2420737 GCGGCTTTTTTCTCT GCTGCTGC TTTGTCT GCAGCGGC TTTCTCAGCAGCTTT TERM 3145 2420737 - 2420753 + g 86 -3.6 -5.39721 | overlap 2420719 2420732 2420747 2420749 GCTGCTTTGTCTGCA GCGGCT TTCTC AGCAGC TTTTTTCTCTGCTGC TERM 3146 2420764 - 2420786 + g 74 -8.4 -3.8709 | overlap 2420749 2420747 2420777 GCAGCTTTTTTCTCT GCTGCTGC TTTGTCT GCAGCGGC TTTCTCGGCAGCTTT TERM 3147 2420809 - 2420831 + g 74 -8.4 -3.86194 | overlap 2420794 2420792 2420822 2420827 GCAGCTTTTTTCTCT GCTGCTGC TTTGTCT GCAGCGGC TTTCTCAGCAGCCTT TERM 3148 2420854 - 2420876 + g 74 -8.4 -3.86194 | overlap 2420839 2420837 2420872 GCAGCCTTTTTCTCT GCTGCTGC TTTGTCT GCAGCGGC TTTCTCAGCGGCCTT TERM 3149 2420899 - 2420921 + g 74 -8.4 -3.8709 | overlap 2420882 2420912 2420917 GCGGCCTTTTTCTCT GCTGCTGC TTTTTCT GCAGCGGC TTTCTCAGCAGCTTT TERM 3150 2420917 - 2420933 + g 86 -3.6 -5.40625 | overlap 2420899 2420912 2420929 GCTGCTTTTTCTGCA GCGGCT TTCTC AGCAGC TTTTTTATCTGCTAT TERM 3151 2420944 - 2420966 + g 82 -3.4 -5.252 | overlap 2420929 GCAGCTTTTTTATCT GCTATTGC TTTTTCT GCTATAGC TTTTTTCTGCGCCTC TERM 3152 2421113 - 2421128 + g 77 -6.1 -4.62904 | GTTTTTTCTGTTGCT GAGCG GCTATA CGCTC TTTTTCAGCCTGTTT tolR 2421943 - 2421515 - | membrane spanning protein in TolA-TolQ-TolR complex tolQ 2422639 - 2421947 - | membrane spanning protein in TolA-TolQ-TolR complex ybgC 2423040 - 2422636 - | acyl-CoA thioesterase TERM 3153 2423169 - 2423144 - R 91 -8.4 -4.63184 | opp_overlap 2423144 AAGGGAGCGTAAAAA TTTATGGACC TTCTGT GGCCCATAAA TTTTTGAAGAGAATT TERM 3154 2423144 - 2423169 + r 74 -6.2 -4.57341 | opp_overlap 2423144 AAGGGAGCGTAAAAA TTTATGGACC TTCTGT GGCCCATAAA TTTTTGAAGAGAATT ybgE 2423483 - 2423190 - | conserved hypothetical protein; putative inner membrane protein TERM 3155 2423265 - 2423252 - G 77 -3.1 -5.055 | GCAATGGGCAAAAAA TCCCT TGCC AGAGA ACCTTCTGCGGACGA TERM 3156 2423448 - 2423421 - G 81 -12.1 -3.21595 | gap 1, opp_overlap 2423426, overlap 2423408 2423426 AAGCGCCATCACGAA GGA-AAGCGCCC GCTGG GGGCGCTTGTCC ATTACCGCATACAAG TERM 3157 2423442 - 2423426 - G 86 -10.8 -3.97042 | opp_overlap 2423426, overlap 2423408 2423421 CCATCACGAAGGAAA GCGCCC GCTGG GGGCGC TTGTCCATTACCGCA TERM 3158 2423426 - 2423442 + g 76 -10.8 -3.41878 | opp_overlap 2423408 2423421 2423426 CCATCACGAAGGAAA GCGCCC GCTGG GGGCGC TTGTCCATTACCGCA cydB 2424750 - 2423611 - | cytochrome d terminal oxidase, subunit II cydA 2426334 - 2424766 - | cytochrome d terminal oxidase, subunit I TERM 3159 2427125 - 2427098 - R 75 -10.6 -2.82856 | overlap 2427089 2427097 2427123 TACAGACCGAATAAG GCGTTCATGCCG CATC CGGCATGAACAA AGCGCCCTTTGTCAA mngB 2429818 - 2427185 - | alpha-mannosidase TERM 3160 2427487 - 2427501 + g 71 -2.8 -4.77567 | CTTTGTTAAGCTTCA TCGCAT CCC ATGGGA TTTTGTTGTAACACT mngA 2431766 - 2429838 - | fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component ; IIB component ; IIC component TERM 3161 2430656 - 2430671 + g 91 -11.8 -4.03234 | opp_overlap 2430655 2430654 GTCCAGCCGCAAAGC CCGGCG CTAA CGCCGG TTTATCTGCCAGCGA TERM 3162 2432198 - 2432186 - g 77 -3.4 -5.14563 | GTTTCGATGAAAAAA TGTC TGATC GACA CATCGATACACACAG mngR 2431924 - 2432643 + | DNA-binding transcriptional dual regulator, fatty-acyl-binding EFER_2375 2433018 - 2433518 + | Methylaspartate mutase S chain (Glutamate mutase sigma subunit) TERM 3163 2434635 - 2434622 - g 95 -6.7 -5.26875 | GCCGGAAGGAAAAAA CAGGT CTGC ACCTG TGTGGGTAATGTTGA EFER_2376 2433518 - 2434906 + | Putative glutamate mutase L EFER_2377 2434925 - 2436370 + | Methylaspartate mutase E chain (Glutamate mutase epsilon subunit) TERM 3164 2437020 - 2437001 - g 90 -7.8 -4.7657 | overlap 2437003 CAAAAAGGGGAAAAA CTGCGTAC ATAC GTACGCTG GCTATCAGATCGCAT EFER_2378 2436371 - 2437612 + | Methylaspartate ammonia-lyase (Beta-methylaspartase) EFER_2379 2437616 - 2438986 + | putative 3-methylaspartate ammonia-lyase, glutamate mutase EFER_2380 2438983 - 2439300 + | hypothetical protein EFER_2381 2439360 - 2440724 + | putative symport protein TERM 3165 2441228 - 2441212 - g 76 -8 -4.25256 | CTTTCAGGAAAATAA TCTGCG CTATT CGCAGA ATGCACCGCTGGATA TERM 3166 2442086 - 2442063 - g 78 -5.2 -4.77036 | opp_overlap 2442065, overlap 2442065 CCGGACCAGCAAAAA CACCGGAAGG TTAC CCTTGCGGTT CTCTGGGCCCGACGA TERM 3167 2442084 - 2442065 - g 74 -7.8 -4.00443 | opp_overlap 2442065, overlap 2442063 GGACCAGCAAAAACA CCGGAAGG TTAC CCTTGCGG TTCTCTGGGCCCGAC EFER_2382 2440787 - 2442439 + | Fumarate hydratase class I, beta subunit, aerobic (Fumarase) EFER_2383 2443370 - 2442447 - | putative LysR-like transcriptional regulator ( transcription regulator) TERM 3168 2443222 - 2443212 - G 78 -5.4 -4.82901 | TGGTGTGCACAAAAA CTCT TCC AGAG CAGTAATCTGACGGA TERM 3169 2443317 - 2443327 + g 70 -5.4 -4.37991 | CGCCTCAAAAGCGAT CAGA AGT TCTG TTTTCGGTATTTTTC TERM 3170 2443626 - 2443609 - R 100 -11.3 -5.42265 | GCAAAGCATAAAAAA GGCCATC ATAC GATGGCC AACCATGTCGAAACC sucD 2444571 - 2443702 - | succinyl-CoA synthetase, NAD(P)-binding, alpha subunit TERM 3171 2444397 - 2444366 - G 73 -9.4 -3.57185 | gap 1, overlap 2444364 2444369 GGTACGTAAATAACA GAAGCGGTAGC-GCC AGT GGCAGCAACGGCTTC ACGCACGGTGTTGAA sucC 2445737 - 2444571 - | succinyl-CoA synthetase, beta subunit TERM 3172 2444666 - 2444679 + g 76 -9.5 -3.73068 | CAGCCAGTTTCTTCG CGCCG AGTT CGGCG TTGTTACCTTCCAGA TERM 3173 2445312 - 2445332 + g 73 -4 -4.81249 | gap 1 AACTTTGTGGATCAG GT-GCGGAG TTTC TTCCGCCAC TTTTTCGATTTCCAC TERM 3174 2445810 - 2445776 - R 83 -10.8 -3.55444 | TCGTTATCTTTTAAA CCGTAGACCGACAC CCTATCC ACGTCGGTCTACAG TGCAGGTGAAACTTA sucB 2447048 - 2445831 - | dihydrolipoyltranssuccinase TERM 3175 2446707 - 2446719 + g 72 -6.3 -4.4261 | overlap 2446673 ACGGATCGCCGGGCT TAACG CAT CGTTA TTTTGCTCTTCCAGA sucA 2449864 - 2447063 - | 2-oxoglutarate decarboxylase, thiamin-requiring TERM 3176 2449249 - 2449261 + g 100 -7.7 -5.48063 | CAGCGGCGGTCAGTT CGCTT AAG AAGCG TTTTTTCTCTTCGCT TERM 3177 2449305 - 2449321 + g 83 -5.1 -5.11063 | CGACCAGACTCGATA CGCTG TTGGATC CAGCG TTTTTCTTCGGTGCT TERM 3178 2449982 - 2450022 + r 72 -7.7 -3.77607 | opp_overlap 2449982 2449983, overlap 2449938 2449983 TGGCTCGCGAAGGAA CCTTTAAAAACTGTCTTAG TGT CAGGGGCAGTTTTTAAAGA TTTCCTGCAATTCTT TERM 3179 2449983 - 2450021 + r 77 -11.2 -2.85841 | opp_overlap 2449983 2449982, overlap 2449982 GGCTCGCGAAGGAAC CTTTAAAAACTGTCTTAG TGT CAGGGGCAGTTTTTAAAG ATTTCCTGCAATTCT TERM 3180 2450040 - 2450078 + r 72 -9.5 -3.09516 | gap 1, opp_overlap 2450053 2450054, overlap 2450042 2450053 2450054 TCCTGCAATTCTTTT GCA-GGCCGGATAAGGCG TTCA CGCCGCATCCGGCCCTGG TTGCCTGATGCGACG TERM 3181 2450042 - 2450075 + r 89 -12.3 -2.76263 | opp_overlap 2450053 2450054, overlap 2450040 2450053 2450054 CTGCAATTCTTTTGC AGGCCGGATAAGGCG TTCA CGCCGCATCCGGCCC TGGTTGCCTGATGCG sdhB 2450836 - 2450120 - | succinate dehydrogenase, FeS subunit sdhA 2452618 - 2450852 - | succinate dehydrogenase, flavoprotein subunit sdhD 2452965 - 2452618 - | succinate dehydrogenase, membrane subunit, binds cytochrome b556 sdhC 2453348 - 2452959 - | succinate dehydrogenase, membrane subunit, binds cytochrome b556 TERM 3182 2453249 - 2453238 - G 70 -5.8 -4.1822 | GCCCACTGCAACAAA GGTG ATCA CACC GGAAACGCGATGGAG EFER_2392 2453400 - 2453621 + | hypothetical protein TERM 3183 2453748 - 2453738 - g 80 -5.4 -4.93898 | ACATCACCAGAAAAA GCAT ACA ATGC GTAAAAGTTATGAAG EFER_2393 2453688 - 2453855 + | hypothetical protein TERM 3184 2454578 - 2454562 - g 70 -4.3 -4.56597 | overlap 2454563 GCCTGTTGTCAAAAA TGCCAAC CAT GGCGGCA ATGTGTTACAAATAT gltA 2454057 - 2455340 + | citrate synthase TERM 3185 2455380 - 2455358 - T 93 -9.1 -4.45485 | opp_overlap 2455359, overlap 2455359 ATGACACCGACAAAA CCCTGCGTG TTTTT CACGCAGGT TTTTTATTTCTGCAC TERM 3186 2455359 - 2455379 + T 100 -12.6 -5.72622 | opp_overlap 2455358 2455359 TGACACCGACAAAAC CCTGCGTG TTTTT CACGCAGG TTTTTTATTTCTGCA TERM 3187 2455379 - 2455359 - T 95 -12.6 -3.26568 | opp_overlap 2455359, overlap 2455358 TGACACCGACAAAAC CCTGCGTG TTTTT CACGCAGG TTTTTTATTTCTGCA EFER_2395 2455651 - 2455493 - | hypothetical protein EFER_2396 2455897 - 2456460 + | putative fimbrial-like adhesin protein TERM 3188 2456487 - 2456471 - gf 76 -10.8 -2.55253 | opp_overlap 2456471, overlap 2456462 2456461 AGTAAGTTCAACCGA GGCGGC CTCCT GCCGCC TTATTTAAAATATTT TERM 3189 2456471 - 2456487 + GF 90 -10.8 -3.97051 | opp_overlap 2456471 2456462 2456461 AGTAAGTTCAACCGA GGCGGC CTCCT GCCGCC TTATTTAAAATATTT TERM 3190 2457357 - 2457327 - gf 72 -7.6 -3.86897 | overlap 2457328 2457330 GGTACGCTCCACAAA TCAGTGGCATCG CCCAAAC CAATGCCACTGT CACCATCAGTCATAA TERM 3191 2457356 - 2457328 - gf 79 -11.1 -2.91924 | overlap 2457327 2457330 GTACGCTCCACAAAT CAGTGGCATCG CCCAAAC CAATGCCACTG TCACCATCAGTCATA TERM 3192 2457857 - 2457868 + GF 78 -7.2 -4.46212 | AGTTTGCTCTCTTTA GCGG CTTA CCGC TTTTCTGATCGCCAA ybgQ 2456432 - 2458969 + | conserved hypothetical protein; putative outer membrane protein EFER_2398 2458960 - 2459715 + | putative exported protein, putative chaperone TERM 3193 2460337 - 2460317 - g 74 -3.3 -5.00616 | TCCCGGCGCAAAAAA CCTGAAATA TCA TATTCAAGG TCTGGAAAATATCCG ybgO 2459712 - 2460773 + | hypothetical protein abrB 2460847 - 2461968 + | hypothetical protein EFER_2401 2462670 - 2462026 - | Pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) EFER_2402 2463675 - 2462680 - | hypothetical protein TERM 3194 2463387 - 2463360 - G 82 -3.4 -5.24129 | gap 1, opp_overlap 2463363 2463365, overlap 2463361 2463362 GTGCCGGATAAAAAA GCCGATTGCCCAA CCG TTGGGCACTCT-C TTCGCGCTGCTGTGG TERM 3195 2463363 - 2463385 + g 72 -10.6 -3.0497 | opp_overlap 2463362 2463360 2463361, overlap 2463365 CCGGATAAAAAAGCC GATTGCCCAA CCG TTGGGCACTC TCTTCGCGCTGCTGT EFER_2403 2464460 - 2463672 - | hypothetical protein TERM 3196 2464438 - 2464459 + g 100 -10.1 -6.02919 | GTGTTGTTGTGATTT TGCTGCGCC TTAT GACGCAGCA TTTTTTTATTTATGC ybgL 2465203 - 2464469 - | putative lactam utilization protein, UPF0271 family ybgK 2466125 - 2465193 - | putative hydrolase subunit ybgJ 2466775 - 2466119 - | putative hydrolase subunit ybgI 2467541 - 2466798 - | conserved hypothetical protein; putative metal-binding protein ybgH 2467810 - 2469291 + | putative transporter TERM 3197 2469304 - 2469342 + T 100 -12.5 -4.29073 | overlap 2469279 2469277 2469304 2469307 TAACAGGCCAGCACC GATGCCTGATAAGACGC TCGCT GCGTTTTATCAGGCTCC TTTCTTCGCTTCTTC TERM 3198 2469304 - 2469341 + T 100 -14.4 -3.16359 | gap 1, overlap 2469279 2469277 2469304 2469307 TAACAGGCCAGCACC GATGCCTGATAAGACGC TCGCT GCGTTTTATCAGGC-TC CTTTCTTCGCTTCTT TERM 3199 2469307 - 2469339 + T 100 -17.2 -3.12773 | overlap 2469279 2469277 2469304 2469304 CAGGCCAGCACCGAT GCCTGATAAGACGC TCGCT GCGTTTTATCAGGC TCCTTTCTTCGCTTC phr 2470752 - 2469334 - | deoxyribodipyrimidine photolyase, FAD-binding ybgA 2471258 - 2470749 - | hypothetical protein TERM 3200 2471342 - 2471304 - R 91 -10.5 -4.13014 | gap 1, opp_overlap 2471307 2471312, overlap 2471312 TGTAGACGGCGAAAA CAAA-AAAACCGCCAGCG TCTC CGTTAGCGGTTTTCTTTG AACATCATGTTTAGC TERM 3201 2471307 - 2471338 + r 70 -8 -3.59087 | opp_overlap 2471304 2471312, overlap 2471312 AGACGGCGAAAACAA AAAAACCGCCAGCG TCTC CGTTAGCGGTTTTC TTTGAACATCATGTT TERM 3202 2471312 - 2471333 + r 91 -7.9 -4.87803 | opp_overlap 2471312 2471304, overlap 2471307 GCGAAAACAAAAAAA CCGCCAGCG TCTC CGTTAGCGG TTTTCTTTGAACATC TERM 3203 2471333 - 2471312 - R 100 -7.9 -6.09196 | opp_overlap 2471307 2471312, overlap 2471304 GCGAAAACAAAAAAA CCGCCAGCG TCTC CGTTAGCGG TTTTCTTTGAACATC ybfA 2471566 - 2471360 - | hypothetical protein TERM 3204 2471766 - 2471777 + H 85 -5.8 -5.14894 | opp_overlap 2471766 ACATTAGTTAAATCA TGGC TTTT GCCA TTTTTATACTTTTTT TERM 3205 2473517 - 2473500 - g 75 -5.5 -4.72272 | GCTGGTGAGTAAAAA GAGCCAG CCCG CCAGCTC CGGCACTCTACCAAC kdpA 2471968 - 2473641 + | potassium translocating ATPase, subunit A TERM 3206 2474370 - 2474386 + G 74 -7.9 -4.11216 | overlap 2474365 TCTTTTTACTGGCAA CCGCCAC GCT GTGGCCG TTTTCCGCGTGGGGC TERM 3207 2474696 - 2474658 - g 93 -5.8 -5.21709 | GCGTAGAGGAAAAAA CGCTGGCCGACGCAGC ACAACTG GCTTCGCTGGCCGACG AAACGCCGGAAGGCC TERM 3208 2475414 - 2475431 + G 77 -9.9 -3.61517 | opp_overlap 2475412 GCATCGCCAACGATG TGGCGAA ATAC TTCGCCA TTATTCCGGCGGCGT kdpB 2473664 - 2475712 + | potassium translocating ATPase, subunit B kdpC 2475721 - 2476293 + | potassium translocating ATPase, subunit C TERM 3209 2476616 - 2476637 + G 73 -11.6 -2.66692 | opp_overlap 2476616, overlap 2476615 ATCTTAATGGACGAA CTGGCGCA CAGTAA TGCGCCAG GTTCTCGTCATCCTA TERM 3210 2476637 - 2476616 - g 81 -12.3 -3.22091 | opp_overlap 2476616 2476615 ATCTTAATGGACGAA CTGGCGCAC AGTA ATGCGCCAG GTTCTCGTCATCCTA TERM 3211 2476760 - 2476792 + G 79 -2.6 -5.1861 | gap 1, opp_overlap 2476768, overlap 2476765 GTCAGCGGCGTCACC GGAATTCAGGTGCGG GAAA CCGTGCCCGA-TCCC TTTTTTGATGCTGCC kdpD 2476286 - 2478970 + | fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein ; sensory histidine kinase kdpE 2478967 - 2479644 + | DNA-binding response regulator in two-component regulatory system with KdpD TERM 3212 2479694 - 2479719 + T 91 -8.5 -4.68846 | gap 1, opp_overlap 2479693 AATTTATTATTAATT CTGCCAAA-AAT ATT ATTATTTGGCAG TTTTAATTTCTTAAT EFER_2417 2480074 - 2479856 - | hypothetical protein TERM 3213 2481037 - 2481051 + G 74 -7.8 -4.03234 | GAGCGTTGCTACAGG CTGGTG CAA CACCGG TTTATCTGGAAACGG speF 2480334 - 2482532 + | ornithine decarboxylase isozyme, inducible potE 2482529 - 2483848 + | putrescine/proton symporter: putrescine/ornithine antiporter TERM 3214 2483885 - 2483866 - T 100 -9.3 -5.67283 | opp_overlap 2483866 AAGCGAAATAAAAAA GGGCGAT TGAATG ATCGCCC TTTCAGATTATTAGC TERM 3215 2483866 - 2483885 + T 80 -10 -3.72051 | opp_overlap 2483866 AAGCGAAATAAAAAA GGGCGATT GAAT GATCGCCC TTTCAGATTATTAGC TERM 3216 2483910 - 2483939 + T 81 -10.7 -3.37796 | ATTAGCAAAGTACTC GTTGTTCATGCCG GATG CGGCGTGAACGCC TTATCCGTCCTACAA TERM 3217 2484022 - 2484060 + T 100 -12.7 -3.97308 | gap 1, opp_overlap 2484025 2484032, overlap 2484032 CGTATCAGGCTATCA TAAGTAAAAAGGGCGATC TTCC GACCGCCCTTTTT-CTTA TTTAATGTGTTTACG TERM 3218 2484057 - 2484025 - T 91 -12.2 -3.4178 | gap 1, opp_overlap 2484022 2484032, overlap 2484032 ATCAGGCTATCATAA GTAAAAAGGGCGATC TTCC GACCGCCCTTTTT-C TTATTTAATGTGTTT TERM 3219 2484032 - 2484051 + T 100 -9.2 -5.39905 | opp_overlap 2484025 2484032, overlap 2484022 TATCATAAGTAAAAA GGGCGATC TTCC GACCGCCC TTTTTCTTATTTAAT TERM 3220 2484051 - 2484032 - T 100 -11.4 -4.94972 | opp_overlap 2484032 2484022, overlap 2484025 TATCATAAGTAAAAA GGGCGATC TTCC GACCGCCC TTTTTCTTATTTAAT pgm 2485711 - 2484071 - | phosphoglucomutase TERM 3221 2484259 - 2484243 - G 73 -9.4 -3.67052 | AGACCGCCAATAGAA GCACCG TTGCC CGGTGC CGCCGTCAGGCGCGC seqA 2486282 - 2485737 - | regulatory protein for replication initiation TERM 3222 2486078 - 2486060 - G 81 -11 -3.60151 | opp_overlap 2486059 2486060 CGTCTGAAAGCAGAA GTTCACGC ATT GCGCGAAC CTTGTCTTTAATCGT ybfF 2486467 - 2487231 + | putative esterase ybfE 2487371 - 2487664 + | LexA regulated protein fldA 2487804 - 2488334 + | flavodoxin 1 TERM 3223 2488340 - 2488367 + T 100 -18.6 -3.19463 | opp_overlap 2488340 2488342 CAATGCCTGACGTAA TACGGCGTAGAC TCGT GTCTACGCCGTA TTAATAGATAATGCC TERM 3224 2488367 - 2488340 - T 100 -18.6 -3.06133 | opp_overlap 2488340, overlap 2488342 CAATGCCTGACGTAA TACGGCGTAGAC TCGT GTCTACGCCGTA TTAATAGATAATGCC TERM 3225 2488365 - 2488342 - T 100 -16.8 -3.08798 | opp_overlap 2488340, overlap 2488340 ATGCCTGACGTAATA CGGCGTAGAC TCGT GTCTACGCCG TATTAATAGATAATG EFER_2425 2488578 - 2488324 - | hypothetical protein fur 2488623 - 2489069 + | DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport TERM 3226 2489111 - 2489084 - T 80 -11.4 -2.71011 | opp_overlap 2489089, overlap 2489089 AGCCCGCCTGAACGA GAAAAGCCAACC TGCG GGTTGGCTTTTT TATACAAGGGACATA TERM 3227 2489106 - 2489089 - T 100 -11.3 -4.5442 | opp_overlap 2489089, overlap 2489084 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG TERM 3228 2489089 - 2489106 + T 100 -11.3 -5.24129 | opp_overlap 2489089 2489084 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG TERM 3229 2489152 - 2489133 - T 78 -5.7 -4.84914 | opp_overlap 2489130 2489133 2489135 AGGGACATAAGAAAA GCGAGAG TTACAG CTCTCAC TTATTTGTTATTGCT ybfN 2489479 - 2489153 - | putative lipoprotein ybfM 2490935 - 2489529 - | putative outer membrane porin TERM 3230 2489822 - 2489835 + g 81 -6.7 -4.63527 | CGCCGATGGCGAAGC CTGGA AGAT TCCAG TTTTTCAGGTCATAC TERM 3231 2490084 - 2490104 + g 74 -8.3 -3.86897 | opp_overlap 2490080 2490083 GCCGTCATAAAGATC GTTGACGCT GCG ATCGTCAAC TTTATCGCGCGTACC TERM 3232 2491298 - 2491314 + r 100 -10.8 -4.39407 | opp_overlap 2491298 AAAAGCAGAAAAAAA CGCCGC AGAGC GCGGCG TTTTGGATTGTTTGC TERM 3233 2491314 - 2491298 - R 100 -11.5 -5.77632 | opp_overlap 2491298 AAAAGCAGAAAAAAA CGCCGCA GAG CGCGGCG TTTTGGATTGTTTGC glnS 2493049 - 2491385 - | glutamyl-tRNA synthetase TERM 3234 2492157 - 2492136 - G 79 -10.1 -3.724 | AACTCACGAATAGAA GCCGCCGTG TAAC CACGACGAC GCAGACCGGAAATGG TERM 3235 2493201 - 2493179 - R 100 -12 -6.17184 | opp_overlap 2493179 ATGATGAAAAAAAAA GCGGCAGAGA AGA TCTCCACCGC TTGTCATTGTTGGAT TERM 3236 2493179 - 2493201 + r 70 -7.6 -3.6149 | opp_overlap 2493179 ATGATGAAAAAAAAA GCGGCAGAGA AGA TCTCCACCGC TTGTCATTGTTGGAT nagE 2495198 - 2493252 - | fused N-acetyl glucosamine specific PTS enzymes: IIC component ; IIB component ; IIA component TERM 3237 2495143 - 2495121 - G 74 -11.2 -3.1886 | overlap 2495112 ACCGAATCGCAGCAA CAGCGCCGCC ACC GGCAGCACCG CGATAGGGAGCTGTA TERM 3238 2495917 - 2495904 - g 100 -6.7 -5.52023 | AGTATGAAGAAAAAA TCCGT TCTT ACGGA AAAATCCATCTGTTT nagB 2495531 - 2496331 + | glucosamine-6-phosphate deaminase TERM 3239 2496341 - 2496366 + F 76 -6.9 -4.5536 | gap 1, overlap 2496342 CTGTAATTGTTATCC CTGCCCTGA-CA CCT TGCTCAGGGCAA TATTTTTTTTAAATC TERM 3240 2496342 - 2496365 + F 78 -10.4 -3.31589 | gap 1, overlap 2496341 TGTAATTGTTATCCC TGCCCTGA-CA CCT TGCTCAGGGCA ATATTTTTTTTAAAT TERM 3241 2497017 - 2497004 - g 72 -4.5 -4.62203 | gap 1 TTGAAAGAAGCAAAA GC-CGG TTT CCGCGC GGGGATTACCTTTGC TERM 3242 2497237 - 2497247 + G 70 -4 -4.59773 | AGCAGGTGCCAACAT TGAA CAG TTCA TTTTTGCGGGTAAAA nagA 2496392 - 2497540 + | N-acetylglucosamine-6-phosphate deacetylase nagC 2497549 - 2498769 + | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine nagD 2498817 - 2499569 + | NMP phosphatase TERM 3243 2499598 - 2499573 - f 100 -13.3 -3.06162 | opp_overlap 2499573 2499577, overlap 2499577 GACGTTATCTGAATA GCAACCACGCC TCAG GGCGTGGTTTC TTATTTTTACCCATC TERM 3244 2499573 - 2499598 + F 100 -13.3 -4.41633 | opp_overlap 2499573 2499577, overlap 2499577 GACGTTATCTGAATA GCAACCACGCC TCAG GGCGTGGTTTC TTATTTTTACCCATC TERM 3245 2499594 - 2499577 - f 95 -12.7 -3.37245 | opp_overlap 2499573 2499577, overlap 2499573 TTATCTGAATAGCAA CCACGCC TCAG GGCGTGG TTTCTTATTTTTACC TERM 3246 2499577 - 2499594 + F 100 -12.7 -4.76802 | opp_overlap 2499577 2499573, overlap 2499573 TTATCTGAATAGCAA CCACGCC TCAG GGCGTGG TTTCTTATTTTTACC TERM 3247 2499666 - 2499651 - f 80 -2.6 -5.4477 | AAATCCGCAAAAAAA TATCGA TTCA TCAATA AATACACCTCCAAAC TERM 3248 2499755 - 2499769 + F 100 -7.8 -5.40072 | overlap 2499747 2499747 ATCGCTTGCGCATAG TGCTGC TTT GCGGCA TTTTTTTAAACAAGC TERM 3249 2501126 - 2501116 - g 71 -3.2 -4.74706 | overlap 2501118 GGCAAGATGGAAAAA CACA TCC TGCG TGAATGTTTTGAGTC asnB 2499826 - 2501490 + | asparagine synthetase B TERM 3250 2501503 - 2501524 + T 100 -13.7 -4.84673 | overlap 2501504 TAAGAAATGTGGTAT TGCCCCGGA GAAA TCCGGGGCG TTTTCTATTATTTAC TERM 3251 2501504 - 2501523 + T 100 -15 -3.49177 | overlap 2501503 AAGAAATGTGGTATT GCCCCGGA GAAA TCCGGGGC GTTTTCTATTATTTA EFER_2436 2501969 - 2501532 - | conserved hypothetical protein; putative exported protein TERM 3252 2502888 - 2502877 - H 71 -4.4 -4.81249 | CGGCAAATTCAAAAA CCAA TTTG TTGG GGTATCGCCAAGCGG TERM 3253 2503077 - 2503104 + H 83 -11.4 -2.93393 | opp_overlap 2503083, overlap 2503083 TACCCCAGCCACATT TGAAAAGCTCGC TTCG GCGAGCTTTTTG CTTTATGAAATCCGA TERM 3254 2503098 - 2503083 - H 91 -10.4 -4.1721 | opp_overlap 2503083 2503077 AGCCACATTTGAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTATGAA TERM 3255 2503083 - 2503098 + H 100 -10.4 -5.04601 | opp_overlap 2503083, overlap 2503077 AGCCACATTTGAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTATGAA TERM 3256 2503600 - 2503613 + G 100 -6.7 -5.95449 | overlap 2503573 GGCAAGACTTACTCG CAGCA GGCG TGCTG TTTTTTATTTTGTTT EFER_2439 2503194 - 2503778 + | hypothetical protein ubiF 2504960 - 2503785 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase miaB 2505106 - 2506530 + | isopentenyl-adenosine A37 tRNA methylthiolase TERM 3257 2506535 - 2506560 + F 100 -15.5 -5.51046 | gap 1, overlap 2506537 ATCAGCCGTAATTCT C-AGGCCCACCG TTC CGGTGGGCCTTG TTTTTTCTCTCTTTA TERM 3258 2506537 - 2506557 + F 100 -18.3 -4.78477 | overlap 2506535 CAGCCGTAATTCTCA GGCCCACCG TTC CGGTGGGCC TTGTTTTTTCTCTCT TERM 3259 2507044 - 2507025 - g 72 -7.8 -3.96696 | overlap 2507040 AATATCAAGACCAAA CGCGGTGT AATT AAACCGCG CACGCCAAACCAGGC TERM 3260 2507689 - 2507676 - g 73 -3.7 -4.86293 | overlap 2507677 2507678 GAACAAAAACGAAAA GCGGC GCTG GCAGC AGAACGCAAGCGCGA ybeZ 2506644 - 2507723 + | putative enzyme with nucleoside triphosphate hydrolase domain TERM 3261 2507779 - 2507764 - g 73 -9 -3.67611 | GGCATGTGAAGATAA TTCCGG GTTA CCGGAA GAGAGCCAGTTTCAG ybeY 2507720 - 2508187 + | putative metal-dependent hydrolase TERM 3262 2508218 - 2508241 + F 93 -8.8 -4.43477 | overlap 2508212 2508217 ACTGGCAGACGTCCC CGCCGTTGGT GATT AACGACGGCG TTTTGATTAACTAAC ybeX 2508277 - 2509155 + | putative protein involved in divalent ion export TERM 3263 2509204 - 2509230 + G 81 -10.2 -3.97307 | gap 1, opp_overlap 2509204 GCCTCATTAATTGAA CGCCAGC-GCA TTCGCC TGCTGCTGGCG TTATTATTCGGTGCC TERM 3264 2509230 - 2509204 - g 70 -10.2 -3.20723 | gap 1, opp_overlap 2509204 GCCTCATTAATTGAA CGCCAGC-GCA TTCGCC TGCTGCTGGCG TTATTATTCGGTGCC lnt 2509180 - 2510718 + | apolipoprotein N-acyltransferase EFER_2446 2510914 - 2510750 - | hypothetical protein TERM 3265 2510823 - 2510843 + gT 100 -13.3 -5.81032 | TTCTCATTGAGCTGT GGGGCGTGA TTA TCATGCCCC TTTTTTTTACGGTTC EFER_2447 2512787 - 2510850 - | hypothetical protein TERM 3266 2513848 - 2513837 - g 70 -5.8 -4.29326 | overlap 2513840 GCGAAAGCGAAGAAA CCAG ACAA CTGG GAAATCGTCGGCAAG gltI 2513183 - 2514091 + | glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3267 2514214 - 2514241 + F 100 -16.4 -5.26316 | TGGGTAACAATCTTC GAGGGTAGCAGT TAAC GCTGCTACCCTC TTTTTTCTGGAGTAG TERM 3268 2514848 - 2514806 - g 77 -3.3 -5.03145 | gap 2, opp_overlap 2514819 2514843, overlap 2514808 GAACCTGGTAAAAAA CTCCGCCATCGCC-TC-GACC ATC GGTCTGGTGGATATGGCGGCG CAGGCCGGTAAATTG gltJ 2514261 - 2515001 + | glutamate and aspartate transporter subunit ; membrane component of ABC superfamily gltK 2515001 - 2515675 + | glutamate and aspartate transporter subunit ; membrane component of ABC superfamily gltL 2515675 - 2516400 + | glutamate and aspartate transporter subunit ; ATP-binding component of ABC superfamily rihA 2516518 - 2517453 + | ribonucleoside hydrolase 1 TERM 3269 2517465 - 2517502 + F 81 -9.3 -3.77089 | gap 1, overlap 2517463 TTAACACACGTCATT GATTAAGATCACCACGCG TTA CCTG-GGTGGTCTTAATC TGTTTATCTCTTTTT hscC 2517537 - 2519207 + | Hsp70 family chaperone Hsc62, binds to RpoD and inhibits transcription TERM 3270 2519252 - 2519209 - T 100 -15.2 -3.56643 | overlap 2519233 TTGAGATCCCTTAAA CACGGCTGCCGGATGCGGCA TAAA CGCTGCATCCGGCATCGGCG CAAAAAACACATCCT djlC 2520718 - 2519267 - | Hsc56 co-chaperone of HscC ybeU 2521422 - 2520715 - | hypothetical protein TERM 3271 2520865 - 2520883 + g 77 -10.2 -3.66784 | TTTGTACAGGGTTAG CGCCTCGC GTA GCGAAGCG TTGTCTTCGCACTGA TERM 3272 2522072 - 2522042 - g 79 -4.7 -4.98436 | GCAACATTATAAAAA TGCGGAAAGATTA CTTGC TGAGCTTCCCGCA CATTAACGTCGACTT ybeT 2521524 - 2522078 + | conserved hypothetical protein; putative outer membrane protein TERM 3273 2522737 - 2522760 + T 71 -9 -3.29593 | gap 1, opp_overlap 2522732 2522730 2522728, overlap 2522732 2522730 2522735 CCACAATAGACGCGT TGCGCG-TATT CAT AATAACGCGCA TCTTCATTATCAGGT insF 2523868 - 2523002 - | IS3 element protein InsF TERM 3274 2523591 - 2523618 + g 75 -4.7 -4.74504 | GCTTTTGCCCTCAGC CCCTGACGGCG CAGGCT TGCCGCCACGG TTTTTACGTTAAAGT insE 2524173 - 2523865 - | IS3 element protein InsE ybeR 2525481 - 2524774 - | hypothetical protein TERM 3275 2526024 - 2525999 - g 76 -7.5 -4.1523 | opp_overlap 2526020, overlap 2526020 CCCAACTATAAAGAA GCGGTTGTCTG GTAT CAGATAGCCGC GGAGAGCGGAATGTC TERM 3276 2526539 - 2526521 - g 76 -11 -3.30039 | opp_overlap 2526536, overlap 2526519 TACGGAGAAGGAAGA CCTGTCGA TCT CCGACAGG CTCTCGACCTGTATC ybeQ 2525645 - 2526622 + | hypothetical protein ybeL 2527174 - 2526692 - | hypothetical protein TERM 3277 2526870 - 2526885 + g 70 -4.6 -4.44245 | TCCTGGAAAACTTCG CGCCAC TCAA GTTGCG TTTTATCGGTAATGT TERM 3278 2527754 - 2527738 - g 78 -5.1 -4.8048 | opp_overlap 2527741 CGCGTACATGAAAAA CCAGC TCAAAAT GCTGG GCTTTGGTTATGACT leuS 2527409 - 2529991 + | leucyl-tRNA synthetase TERM 3279 2530237 - 2530205 - g 72 -4.7 -4.67607 | opp_overlap 2530210 TGCTTAATAAAGAAA CCACTCGTAAGGACG TTC CATCCCTGCGTTTGG GTAAAGTGAGCATCG rlpB 2530006 - 2530587 + | minor lipoprotein TERM 3280 2530608 - 2530650 + G 100 -12 -4.45544 | gap 1, opp_overlap 2530611, overlap 2530609 2530611 CGGTTGTACCCAGAA CA-ACTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCGTATC TTTTACTTGGTAACG TERM 3281 2530609 - 2530648 + G 100 -17.1 -3.83437 | opp_overlap 2530611, overlap 2530608 2530611 GGTTGTACCCAGAAC AACTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCGTA TCTTTTACTTGGTAA TERM 3282 2530611 - 2530646 + G 100 -19.7 -3.49321 | opp_overlap 2530611, overlap 2530609 2530608 TTGTACCCAGAACAA CTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCG TATCTTTTACTTGGT TERM 3283 2530646 - 2530611 - g 100 -17.5 -3.8211 | opp_overlap 2530611 2530609 2530608 TTGTACCCAGAACAA CTCCGCGCGCAGCTC AATGAA GGGCTGCGCGCGGCG TATCTTTTACTTGGT holA 2530587 - 2531618 + | DNA polymerase III, delta subunit nadD 2531622 - 2532263 + | nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent ybeB 2532522 - 2532839 + | hypothetical protein ybeA 2532843 - 2533310 + | hypothetical protein TERM 3284 2534323 - 2534352 + G 72 -7.9 -3.98083 | gap 1, overlap 2534330 AAGGCGTTTATCCAC CAGCGTC-TACGGT TAA ACCGTATGTTGCTG TTTCTGCCTTAAGTG TERM 3285 2534666 - 2534652 - g 85 -2.8 -5.33026 | opp_overlap 2534652, overlap 2534664 GAATGGAAACAAAAA CGCTTT AAA AAACCG TGGTATCAGGGCGAT TERM 3286 2534677 - 2534664 - g 74 -2.3 -5.03747 | opp_overlap 2534652 2534667, overlap 2534652 2534666 AAACGCTTTAAAAAA CCGTG GTAT CAGGG CGATACCATTCCTGT mrdA 2533341 - 2535242 + | transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) TERM 3287 2535304 - 2535270 - gf 100 -8.7 -5.80364 | opp_overlap 2535270 ATCCGAATAAAAAAA CATTCTGGGATAAAG TCCAT CTTGATCCCACAATG TTGCTCATTTTACTG TERM 3288 2535270 - 2535304 + GF 71 -8.7 -3.38604 | opp_overlap 2535270 ATCCGAATAAAAAAA CATTCTGGGATAAAG TCCAT CTTGATCCCACAATG TTGCTCATTTTACTG mrdB 2535245 - 2536357 + | cell wall shape-determining protein TERM 3289 2537221 - 2537236 + GF 77 -6.8 -4.4648 | overlap 2537205 2537203 CGCAGGCCGCGACTC CCGCTG CCAG CAGTGG TTTTATGGTGCAGGT rlpA 2536308 - 2537456 + | minor lipoprotein dacA 2537597 - 2538808 + | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) TERM 3290 2538881 - 2538864 - f 100 -12.7 -4.33105 | opp_overlap 2538864 2538860 2538859, overlap 2538848 TAAGCATCAGTAAAA CTCCCGC TCAG GCGGGAG TTGCTATTTAATTAC TERM 3291 2538864 - 2538881 + F 100 -12.7 -3.50456 | opp_overlap 2538848 2538864, overlap 2538860 2538859 TAAGCATCAGTAAAA CTCCCGC TCAG GCGGGAG TTGCTATTTAATTAC ybeD 2538914 - 2539177 + | hypothetical protein lipB 2539278 - 2539928 + | lipoyl-protein ligase lipA 2540107 - 2541072 + | lipoate synthase TERM 3292 2541124 - 2541141 + T 74 -6.3 -4.56978 | gap 1, opp_overlap 2541124 TAGTGATCAAAAAAA CCCGC-AT TTC ATCGCGGG TTTATTATTTGCAGA TERM 3293 2541141 - 2541124 - T 91 -6.3 -5.53991 | gap 1, opp_overlap 2541124 TAGTGATCAAAAAAA CCCGC-AT TTC ATCGCGGG TTTATTATTTGCAGA tatE 2541404 - 2541186 - | TatABCE protein translocation system subunit TERM 3294 2541537 - 2541516 - R 75 -2.1 -5.41143 | overlap 2541519 2541527 CATTGTTTAAAAAAA CATCACAGC AATT GCGGTGGCG CAAATCGGCGGTTGG EFER_2478 2542381 - 2541518 - | putative hydrolase crcB 2542398 - 2542781 + | conserved hypothetical protein; putative inner membrane protein associated with chromosome condensation TERM 3295 2542794 - 2542810 + T 100 -12.3 -4.20042 | opp_overlap 2542794 TAAAGACAAAAAAAA CCCGCTT CAG AAGCGGG TTTTGAAATCTTGCT TERM 3296 2542810 - 2542794 - T 100 -12.3 -6.15717 | opp_overlap 2542794 TAAAGACAAAAAAAA CCCGCTT CAG AAGCGGG TTTTGAAATCTTGCT cspE 2543044 - 2542835 - | DNA-binding transcriptional repressor TERM 3297 2543086 - 2543070 - R 72 -7.3 -4.02302 | opp_overlap 2543072 TTTACATGAAAAATA GACACAA ATG CTGTGTC GGTTACCAGTACACC EFER_2481 2543814 - 2543230 - | CrcA protein TERM 3298 2543764 - 2543781 + g 91 -2.7 -5.48303 | opp_overlap 2543741 2543763 2543764 TGTTGCAATTACAAT TATCAGA TAAG TCAGATA TTTTTTTGCAATTAT dcuC 2544237 - 2545625 + | anaerobic C4-dicarboxylate transport TERM 3299 2545657 - 2545629 - f 100 -12.4 -4.62069 | gap 1, opp_overlap 2545627 2545630, overlap 2545630 GCTGCAGCCTAAAAA TGCGTCGCCGGAG GCCT CTCCGGCG-CGCT CCTTCTTAACCATGG TERM 3300 2545630 - 2545656 + F 100 -15.9 -2.93549 | gap 1, opp_overlap 2545629 2545630, overlap 2545627 CTGCAGCCTAAAAAT GCGTCGCCGGAG GCCT CTCCGGCG-CGC TCCTTCTTAACCATG TERM 3301 2545656 - 2545630 - f 100 -15.9 -3.3692 | gap 1, opp_overlap 2545630 2545627, overlap 2545629 CTGCAGCCTAAAAAT GCGTCGCCGGAG GCCT CTCCGGCG-CGC TCCTTCTTAACCATG TERM 3302 2545777 - 2545804 + F 100 -10.5 -5.37345 | opp_overlap 2545773 2545794 TGAATAAAGTATCAG GCTCGCCGGGT AAACAC GCCCGACGAGC TTTTTTATGGTTACA rna 2545854 - 2546666 + | ribonuclease I TERM 3303 2546806 - 2546784 - f 84 -11.2 -3.70417 | opp_overlap 2546784, overlap 2546775 ATCATACGAGTTAAA CCCTCGCCGC CTG ACGGTGAGGG TTTTCTTTTGGGTGT TERM 3304 2546784 - 2546806 + F 100 -12.7 -5.11836 | opp_overlap 2546775 2546784 ATCATACGAGTTAAA CCCTCGCCG CCTGA CGGTGAGGG TTTTCTTTTGGGTGT rnk 2546865 - 2547275 + | regulator of nucleoside diphosphate kinase TERM 3305 2547311 - 2547330 + F 93 -12.2 -3.60805 | AGTGCGCTTTGCCCA GAGGATGC TTCT GCATCCTC TTTGCGGTCAAATAT TERM 3306 2547577 - 2547558 - f 73 -5.8 -4.53036 | opp_overlap 2547562 TCACAAAGATTAAAA TCCATCAT ACAA ATGATAGA TTCAAAACCAATAAT uspG 2547634 - 2548062 + | universal stress protein UP12 TERM 3307 2548083 - 2548110 + T 100 -17 -5.08601 | overlap 2548100 AAAAATATTTATGCC GCCCTGCCCGGA GCCA TCCCGGCAGGGC TTTTTATTGCAATAA TERM 3308 2548153 - 2548130 - T 100 -13.1 -5.46657 | opp_overlap 2548100 TATTGCAATAAAAAA GCCGCCAGG TTTGAC CCCGGCGGC TAAGCAATTGCAGGT ahpF 2549749 - 2548184 - | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding TERM 3309 2549705 - 2549722 + g 72 -9.9 -3.41195 | AGGCTTGGTCAATTT CTCAAGG TAAG CCTTGAG TTGAGTTTTCATATT TERM 3310 2549856 - 2549837 - R 100 -13.6 -4.63218 | GTGCGGGGAAGAAAA TCGGGTGC CGCA GCACCCGA AGAATTAGGTGAATT ahpC 2550483 - 2549920 - | alkyl hydroperoxide reductase, C22 subunit TERM 3311 2550408 - 2550430 + g 88 -8.4 -4.67353 | CTTCGGTATCTTTTT CGGTGATTTC GAT GAATTCGCCG TTTTTGAATGCCTGG TERM 3312 2550881 - 2550867 - g 81 -5 -5.10029 | ATTAATGTTAAAAAA GTCACT TTT AATGAC AATGTTACCTGCCAT TERM 3313 2550992 - 2550964 - g 81 -6.1 -4.81814 | gap 1 ATTACCATAATAAAA CCTTTCGACGCC CCCGGC GGCAT-GAAAGG CTATCTGGGGAAATA dsbG 2550796 - 2551602 + | periplasmic disulfide isomerase/thiol-disulphide oxidase EFER_2490 2551769 - 2552740 + | putative HTH-type transcriptional regulator ybdO ibrA 2552809 - 2554059 + | immunoglobulin-binding regulator TERM 3314 2554646 - 2554612 - g 75 -7.2 -4.41348 | opp_overlap 2554612 TGCGCCTGAAACAAA TTAACGGCCTGCAA GAGTTAT TTGCTGACCGTCAA TATTCCCGTGCCTGG ibrB 2554056 - 2554673 + | immunoglobulin-binding regulator ybdL 2555834 - 2554674 - | methionine aminotransferase, PLP-dependent TERM 3315 2555303 - 2555284 - G 74 -2 -5.06735 | overlap 2555275 2555285 2555287 CACAAAGCAGAAAAA TCAGTCTG CTGC CAGACAGT AGCACTGGGGTTATG ybdH 2555943 - 2557031 + | putative oxidoreductase ybdD 2557238 - 2557041 - | hypothetical protein cstA 2559471 - 2557366 - | carbon starvation protein TERM 3316 2557999 - 2557987 - G 72 -6.9 -4.19177 | overlap 2557988 ATCCTGCAACATAAA GCGCG CAG CACGC GTACCCGCATCCACC TERM 3317 2559038 - 2559024 - G 73 -11.4 -2.70932 | TCTCTTCTTTAACCA GCTCGC CCA GCGAGC GACCGTCACGGCGCG ybdB 2560065 - 2559652 - | putative esterase entA 2560814 - 2560068 - | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase entB 2561671 - 2560814 - | isochorismatase entE 2563295 - 2561685 - | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex TERM 3318 2562085 - 2562070 - G 71 -3.2 -4.87626 | CCGGAACAGTAAAAA CCGTTG GCAT CAAAGG CGCTGGCATTGTGCT TERM 3319 2562607 - 2562570 - G 73 -11.3 -2.73735 | gap 1, opp_overlap 2562606, overlap 2562560 AAATACCCCCAACGA TCCCGGCGAACTCATGGC GTA GTTATGAGC-CGCCGGGA TCGCGCACAGGTAGC entC 2564480 - 2563305 - | isochorismate synthase 1 fepB 2564669 - 2565625 + | iron-enterobactin transporter subunit ; periplasmic-binding component of ABC superfamily ybdA 2566879 - 2565629 - | enterobactin exporter fepD 2566990 - 2567994 + | iron-enterobactin transporter subunit ; membrane component of ABC superfamily fepG 2567991 - 2568983 + | iron-enterobactin transporter subunit ; membrane component of ABC superfamily fepC 2568662 - 2569780 + | iron-enterobactin transporter subunit ; ATP-binding component of ABC superfamily TERM 3320 2569814 - 2569778 - T 82 -2.3 -5.72622 | gap 1, opp_overlap 2569784, overlap 2569786 GGGAGAAATAAAAAA TGA-AAAAAGGGAGCG CATTAC CGCTCCCCGGTTGTCA TCACACTAACTGTTC TERM 3321 2569805 - 2569786 - T 100 -10.7 -5.59502 | opp_overlap 2569784, overlap 2569778 TAAAAAATGAAAAAA GGGAGCG CATTAC CGCTCCC CGGTTGTCATCACAC EFER_2507 2570990 - 2569815 - | Ferric enterobactin transport protein fepE TERM 3322 2571159 - 2571135 - R 100 -4.4 -5.95946 | opp_overlap 2571135 TTAAGAATAAAAAAA CCATAATC ATTTAGTCG GATTATGG TTTTCCGTGGGATTA entF 2575081 - 2571200 - | enterobactin synthase multienzyme complex component, ATP-dependent TERM 3323 2571865 - 2571855 - G 72 -6.8 -4.18762 | AACTGCCAGGCAAAA CCAG ATG CTGG ATGGAAACAAAACAG TERM 3324 2571981 - 2571961 - G 84 -11.1 -3.75024 | CTTCACCATCAATAA CCGTTGCCA GTT TGGCGACGG TTGACGCGACCATCA TERM 3325 2573004 - 2572985 - G 70 -5.6 -4.33621 | overlap 2572977 2572986 CAGCGAAGCAACAAA CGCCGCCA GCAT CGACGGCA CAAAATGCGTGGTCG TERM 3326 2573663 - 2573679 + g 95 -10.1 -4.59511 | overlap 2573664 2573674 2573676 ACGCACATCTGCCAG TGCCGGA GCA TCCGGCG TTTTTGCCGCCTGTT TERM 3327 2573664 - 2573678 + g 80 -11.4 -3.34984 | overlap 2573663 2573674 2573676 CGCACATCTGCCAGT GCCGGA GCA TCCGGC GTTTTTGCCGCCTGT TERM 3328 2574440 - 2574414 - G 84 -10.8 -3.71913 | overlap 2574412 TTCAGACGCAAAATA TCTGCCGAGGCG CTG CGCCCCGGTAAA GGGACTGGAGAAAGT ybdZ 2575302 - 2575078 - | hypothetical protein fes 2576423 - 2575299 - | enterobactin/ferric enterobactin esterase TERM 3329 2576939 - 2576926 - g 70 -3.7 -4.64657 | TGAAATCCGCAAAAA CCCGG TTGC CCGCG ATGTGTCGGAGATCA fepA 2576744 - 2578984 + | iron-enterobactin outer membrane transporter TERM 3330 2579015 - 2579044 + G 95 -14.3 -3.30124 | GTTGACAAAGTGCGC GTCGTTCATGCCG GATG CGGCGTGAACGCC TTATCCGGCCTACAA TERM 3331 2579805 - 2579780 - g 74 -7.5 -4.03234 | opp_overlap 2579782, overlap 2579782 TGCCGGGCAGATAAA CACCCGCACAC TGCC GCATGCGGGTT GTCTGGCGGATAATT TERM 3332 2579803 - 2579782 - g 77 -10.1 -3.61232 | opp_overlap 2579782, overlap 2579780 CCGGGCAGATAAACA CCCGCACAC TGCC GCATGCGGG TTGTCTGGCGGATAA EFER_2513 2579009 - 2579818 + | 4'-phosphopantetheinyl transferase entD EFER_2514 2580866 - 2579820 - | putative transketolase C-terminal section EFER_2515 2581578 - 2580748 - | putative transketolase N-terminal section (TK) TERM 3333 2582510 - 2582499 - g 93 -3.6 -5.5208 | overlap 2582500 2582501 GTAGAAGAGAAAAAA CGCC TGGT GGCA AGCCAGGATGTGGCT EFER_2516 2581941 - 2582891 + | putative transcriptional regulator TERM 3334 2582914 - 2582947 + F 95 -12.5 -3.35639 | overlap 2582915 CTCCCTTTCTTCTGC CCGCCTTTGCGAAAA AATC TTCTCGCAAAGGCGA TTGCTTAAAAATCTT TERM 3335 2582915 - 2582946 + F 100 -16 -2.60901 | overlap 2582914 TCCCTTTCTTCTGCC CGCCTTTGCGAAAA AATC TTCTCGCAAAGGCG ATTGCTTAAAAATCT EFER_2517 2583242 - 2584762 + | Glycerol kinase 2 (ATP:glycerol 3-phosphotransferase 2) (Glycerokinase 2) (GK 2) TERM 3336 2585030 - 2585016 - g 75 -5.6 -4.65895 | overlap 2585017 GGTGCCAGTGAAAAA GCCCAG CAA CTGGGA TATAAAACGACCATT EFER_2518 2584866 - 2585801 + | putative ABC transporter sugar-binding protein EFER_2519 2585812 - 2586468 + | putative lipoprotein TERM 3337 2586762 - 2586774 + G 70 -6.3 -4.16284 | GAATTAGTATCATTT TTCAG GAG CTGAA TTTATTCCCGAATAT TERM 3338 2586809 - 2586823 + G 74 -2.9 -5.00616 | GTCATGGATAACATT TTCAT GGCTA ATGAA TTTTTTCAGAAAGGG EFER_2520 2586470 - 2588014 + | putative transport system ATP-binding protein for a carbohydrate-related molecule TERM 3339 2588574 - 2588595 + G 86 -5.9 -5.0925 | overlap 2588568 TTTAGGCGTTTATCT GCCAATC TGGCTGAT GATTGGC TTTTTGGTTTTAGGC EFER_2521 2588032 - 2589099 + | putative transport system permease for a carbohydrate-related molecule TERM 3340 2589114 - 2589133 + F 76 -10.7 -2.57132 | opp_overlap 2589114, overlap 2589113 ATTAACATCATTCAA CCGGGCA TTAAAT TGCCCGG CTTATACAGGGGAAA TERM 3341 2589133 - 2589114 - f 79 -10.7 -3.137 | opp_overlap 2589114 2589113 ATTAACATCATTCAA CCGGGCA TTAAAT TGCCCGG CTTATACAGGGGAAA EFER_2522 2589126 - 2589950 + | Oxidoreductase, short chain dehydrogenase/reductase family EFER_2523 2589950 - 2590768 + | putative 3-oxoacyl-[acyl-carrier-protein] reductase TERM 3342 2590811 - 2590772 - T 95 -9.2 -4.56775 | overlap 2590773 2590774 2590809 2590810 ATCTGCTGGTAAAAA TGGTTTCGCCCGCAGCCA TCAC TGACCGCGGGCGAAAGTG TAAAGCAGGTGCCTT TERM 3343 2590810 - 2590773 - T 95 -12.7 -3.33744 | overlap 2590772 2590774 2590809 TCTGCTGGTAAAAAT GGTTTCGCCCGCAGCCA TCAC TGACCGCGGGCGAAAGT GTAAAGCAGGTGCCT TERM 3344 2590809 - 2590774 - T 100 -16.2 -2.60032 | overlap 2590773 2590772 CTGCTGGTAAAAATG GTTTCGCCCGCAGCCA TCAC TGACCGCGGGCGAAAG TGTAAAGCAGGTGCC TERM 3345 2590877 - 2590845 - T 78 -10.6 -3.32963 | gap 1, opp_overlap 2590845, overlap 2590846 ATCCTGACCTGACAA CCGGATATGCGGGGA TTAC TCCCCGCACAAC-GG CTACTTCTTCGGTTC TERM 3346 2590877 - 2590846 - T 76 -10.8 -2.59564 | opp_overlap 2590845, overlap 2590845 TCCTGACCTGACAAC CGGATATGCGGGGA TTAC TCCCCGCACAACGG CTACTTCTTCGGTTC EFER_2524 2591175 - 2590942 - | hypothetical protein TERM 3347 2591314 - 2591275 - R 79 -8.4 -4.08216 | overlap 2591280 2591312 2591313 TCATTGCCCTTAAAA CGACATCGCCCGCAGCCA TCAC TGACCGCGGGCGAAAGTG TAAAGCAGGTGCCTT TERM 3348 2591309 - 2591280 - R 100 -17.9 -3.09823 | overlap 2591275 GCCCTTAAAACGACA TCGCCCGCAGCCA TCAC TGACCGCGGGCGA AAGTGTAAAGCAGGT TERM 3349 2591380 - 2591348 - R 78 -10.6 -3.32963 | gap 1, opp_overlap 2591348, overlap 2591349 ATCCTGACCTGACAA CCGGATATGCGGGGA TTGC TCCCCGCACAAC-GG CTACTTCTTCGGTTC TERM 3350 2591380 - 2591349 - R 76 -10.8 -2.59564 | opp_overlap 2591348, overlap 2591348 TCCTGACCTGACAAC CGGATATGCGGGGA TTGC TCCCCGCACAACGG CTACTTCTTCGGTTC EFER_2525 2591632 - 2591381 - | putative small toxic membrane polypeptide, Putative HokE-like protein (partial) EFER_2526 2591678 - 2591445 - | hypothetical protein TERM 3351 2591600 - 2591559 - G 85 -11.8 -3.65046 | gap 1, opp_overlap 2591596 CCTCCATGCGAAGAA GGGGCTACCA-TCCAAA TTGTTCGGG TTTGGAGTGGCAGCCCC AGGGTTGATAGAAAT TERM 3352 2591675 - 2591654 - GH 70 -7.3 -3.84266 | AGACCTCAGAGTAAA CCTGAAACC GGAA AGCTTCAGG CACCCGCAGTCATCT TERM 3353 2592413 - 2592426 + G 82 -8.1 -4.49556 | TGTTGGCTGCGCCAG TGGCG ATGA CGCCA TTTATTTGCTGCACG ybdK 2591985 - 2593103 + | gamma-glutamyl:cysteine ligase ybdJ 2593169 - 2593417 + | conserved hypothetical protein; putative inner membrane protein ybdF 2593482 - 2593850 + | hypothetical protein TERM 3354 2594500 - 2594488 - g 70 -5.5 -4.32857 | opp_overlap 2594492 2594493 GGTCTGAAAGAGAAA GGCTA CAC CAGCC TGGTGGTTGTTCCGG nfnB 2593945 - 2594598 + | dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive TERM 3355 2594606 - 2594627 + F 90 -11.5 -3.61103 | overlap 2594608 AAGTGTAATTCTCCT TTGCCGGGC ATCC GCCCGGCTA TTTCCCCTCAGATTA TERM 3356 2594608 - 2594625 + F 100 -14.1 -3.38224 | overlap 2594606 GTGTAATTCTCCTTT GCCGGGC ATCC GCCCGGC TATTTCCCCTCAGAT ybdG 2594706 - 2595953 + | putative membrane protein; putative channel TERM 3357 2595962 - 2595988 + T 100 -16.7 -3.63895 | opp_overlap 2595962 GCAGTAATTAAAAAA CCGCTCTCATC GAATG GATGAGAGCGG TTTCGGATGGTTGAC TERM 3358 2595988 - 2595962 - T 100 -16.7 -5.30155 | opp_overlap 2595962 GCAGTAATTAAAAAA CCGCTCTCATC GAATG GATGAGAGCGG TTTCGGATGGTTGAC pheP 2597409 - 2596033 - | phenylalanine transporter cusA 2600654 - 2597511 - | copper/silver efflux system, membrane component TERM 3359 2597970 - 2597940 - GR 73 -8.2 -3.62275 | overlap 2597960 2597964 ACCCACCAGCGCAAA CGGTACGCTGCTGA TAA TCAGCAACGCTTCG CCCACCCGACGGAAC TERM 3360 2598299 - 2598331 + gr 78 -9.8 -3.57144 | gap 1 GCGTCAGGATCGGTA GCTGGCGC-AGCGCC TGTG GGCTATCGCGCCAGC TTTGCGGATAACGCA TERM 3361 2598811 - 2598821 + gr 73 -8.2 -3.66666 | overlap 2598800 GGTGCGGAGTCGGTG GCGG TTT CCGC TTTCCCGGTTTTGCC TERM 3362 2599119 - 2599129 + gr 72 -5.4 -4.57569 | GAGCGGGTTACTGCT TTCC GGT GGAA TTTTTCCACGGATCC EFER_2535 2600712 - 2600557 - | hypothetical protein TERM 3363 2600629 - 2600617 - G 70 -4.8 -4.49311 | overlap 2600619 ATCAGCACCAGAAAA CGGT TCGCC ACCG AGCGACGAATAATCC cusB 2601889 - 2600666 - | copper/silver efflux system, membrane fusion protein TERM 3364 2601329 - 2601298 - GR 80 -11.6 -2.70932 | gap 1, overlap 2601309 TTTGCGTGGTAATCA GGCGGCGAATATCGG CCT CCGGCATTC-CCGCC AGCCGCAGGCGTTCA TERM 3365 2601351 - 2601378 + gr 73 -9 -3.53224 | opp_overlap 2601351 2601349 AGGCGTTCAAGAATA CCGTCGGTCTGG GTCG CCGTACCGCCGG TTTCGCGCAGCAGTA cusF 2602237 - 2601905 - | periplasmic copper-binding protein cusC 2603648 - 2602260 - | copper/silver efflux system, outer membrane component TERM 3366 2602749 - 2602734 - G 81 -6.8 -4.65838 | overlap 2602725 GATAGACGGGAAAAA TGCCGC ACGC GCAGCA CCAATATTGGCATTA TERM 3367 2603737 - 2603716 - H 74 -6.7 -4.34402 | opp_overlap 2603716, overlap 2603724 CCGGTGACAGGAAAA TGACAAAAT TGTC ATTTTGCCA ATAAGCGATTGCCAT TERM 3368 2604268 - 2604278 + G 82 -3.2 -5.24531 | overlap 2604253 CCAGTAAAGAGTTTA CTCT GCT GGAG TTTTTTCTCCGCCAT cusR 2603799 - 2604482 + | DNA-binding response regulator in two-component regulatory system with CusS cusS 2604460 - 2605920 + | sensory histidine kinase in two-component regulatory system with CusR, senses copper ions EFER_2542 2606136 - 2606615 + | hypothetical protein EFER_2543 2606809 - 2607099 + | hypothetical protein TERM 3369 2607635 - 2607612 - T 100 -14.6 -5.17054 | opp_overlap 2607611 2607610 ACAATAGTCAAAAAA TTGCGCCGCC CAGG GGCGACGCAA CATTCTAATTTATCG htpG 2609531 - 2607657 - | molecular chaperone HSP90 family TERM 3370 2608831 - 2608848 + g 79 -9.9 -3.75115 | GACTTGTTACGGGTC CAAAGCG CCTG CGCTTTG TTGATTTTCTCCCAG TERM 3371 2609070 - 2609090 + g 100 -10.5 -4.91109 | TTCGCCCGCCGATTC CCAGAAGAC GCC GTTTTCTGG TTTTTCTCCTGCCGC TERM 3372 2609641 - 2609606 - R 75 -10.4 -2.79135 | opp_overlap 2609612 2609633, overlap 2609605 2609615 ACAAGGGGGAATAAT TTCAAGCGAGAGCAGG TGAT CCTGCTCTCGTTTGCT TAAAAACGAATCTTA TERM 3373 2609612 - 2609635 + r 100 -16.8 -3.90112 | opp_overlap 2609606 2609605 2609615, overlap 2609633 GGGAATAATTTCAAG CGAGAGCAGG TGAT CCTGCTCTCG TTTGCTTAAAAACGA TERM 3374 2609632 - 2609615 - R 79 -11.3 -2.55818 | opp_overlap 2609612, overlap 2609606 2609605 AATAATTTCAAGCGA GAGCAGG TGAT CCTGCTC TCGTTTGCTTAAAAA recR 2610246 - 2609641 - | gap repair protein TERM 3375 2609826 - 2609837 + g 87 -4.4 -5.21709 | GGTTGGTGGCGAGGA TCAC TTCA GTGA TTTTTTCCTCTGCCA TERM 3376 2609953 - 2609936 - G 70 -4.7 -4.45115 | ATCAACACAAAATAA CGGCCTG AAAA CTGACCG GTCTGCTCAATGGCA TERM 3377 2610166 - 2610210 + g 72 -10.6 -3.07622 | gap 1, overlap 2610169 2610209 CAGCGTGAACGCCAT ACGCTGCGCCGACT-TCGGGC CAAC GCCCGGCAGACAGCGCAGTGC TTCCATAAGCTGTGT TERM 3378 2610169 - 2610207 + g 81 -13.1 -2.75382 | gap 1, overlap 2610166 CGTGAACGCCATACG CTGCGCCGACT-TCGGGC CAAC GCCCGGCAGACAGCGCAG TGCTTCCATAAGCTG ybaB 2610575 - 2610246 - | hypothetical protein TERM 3379 2610502 - 2610514 + g 91 -3.4 -5.49234 | TGCGCGATCTCTTCC TGCA TTTTC TGCA TTTTTTCTTGCATCT TERM 3380 2610626 - 2610610 - R 81 -10.9 -3.25015 | GTTAAGGATGACGAA CGTAAGC TGT GCTTACG ATCAAATGGGGCGGA dnaX 2612559 - 2610628 - | DNA polymerase III/DNA elongation factor III, tau and gamma subunits TERM 3381 2610712 - 2610729 + g 95 -6.9 -5.17744 | opp_overlap 2610709 2610712 ATCCGCAATAATGGA CTCGCGC GCCT GCGCAAG TTTTTCTTCATATAT TERM 3382 2610882 - 2610924 + g 71 -9.1 -3.56594 | opp_overlap 2610897 2610900 TGTTTAAATGCCGCT GAGAGGAGCGCAAATGCAG ACATA CTGCGTTGTCGCTCTCCTC TTTCCAGGCATTTAA TERM 3383 2611030 - 2611043 + g 88 -5.2 -5.27779 | overlap 2611028 TGCCGCCAGCTTTGC CGCC AGTTCC GGCG TTTTTTCATGTTCCA TERM 3384 2611079 - 2611095 + g 75 -4.3 -4.7497 | overlap 2611082 TTTTTCAGCGCCTTC GGCGTGG CGA CCACTTC TTTTTGCTGCATCAC TERM 3385 2611082 - 2611092 + g 77 -6.8 -4.4831 | overlap 2611079 TTCAGCGCCTTCGGC GTGG CGA CCAC TTCTTTTTGCTGCAT TERM 3386 2611236 - 2611263 + g 76 -10.5 -3.36112 | gap 1 GCGCAGCGTTATTCA CCGGCCGCGCGC GGGTA GCG-GCTGCCGG TTCACTCTTTTTTGC TERM 3387 2611317 - 2611337 + g 81 -10.4 -3.86015 | overlap 2611315 GCAGTTGTTGGCGCG CCGCCAGC ACCTG GCTGGTGG TTTCTGAGAGCGGTA TERM 3388 2612377 - 2612405 + g 72 -5.2 -4.56597 | gap 1, opp_overlap 2612404 AGTTTCGCAGTTTAG CCCCT-TCGCCAG CAGT CGGGCGATAGAGG TTTTTCCGACGCCCC TERM 3389 2612636 - 2612612 - R 74 -9.9 -3.09492 | overlap 2612597 2612614 2612626 GGGGTAATGCTAACA CAGCCCCGTCA GAA CGGCGAGGCTG AATGCACATCTTGTG apt 2613239 - 2612688 - | adenine phosphoribosyltransferase ybaN 2613769 - 2613401 - | conserved hypothetical protein; putative inner membrane protein TERM 3390 2613929 - 2613950 + G 72 -5.7 -4.57073 | overlap 2613930 CAGTTCGCCACGCTA AGCGCCCGT TTCG ACAGGCGCC TTTTTCAAACCCGTG priC 2613839 - 2614366 + | primosomal replication protein N'' TERM 3391 2614368 - 2614344 - f 70 -7.1 -3.85072 | overlap 2614342 2614345 AAAAAATCGAAAACA GGTTAGCGCGT TTA ACCCGCTAACA ATGGAGAGAATATGT TERM 3392 2614367 - 2614345 - f 75 -10.6 -2.88603 | overlap 2614344 2614342 AAAAATCGAAAACAG GTTAGCGCGT TTA ACCCGCTAAC AATGGAGAGAATATG ybaM 2614380 - 2614544 + | hypothetical protein TERM 3393 2614549 - 2614576 + T 100 -15 -3.51825 | opp_overlap 2614549, overlap 2614553 AAAGCGAGTAAAAAA TAAAGGGCGGCA TCAC TGTCGCCCTTTA TTGTCCTTACCCTAC TERM 3394 2614576 - 2614549 - T 100 -12.8 -5.19261 | opp_overlap 2614549 2614553 AAAGCGAGTAAAAAA TAAAGGGCGGCA TCAC TGTCGCCCTTTA TTGTCCTTACCCTAC TERM 3395 2614553 - 2614572 + T 100 -11.4 -4.3953 | opp_overlap 2614549, overlap 2614549 CGAGTAAAAAATAAA GGGCGGCA TCAC TGTCGCCC TTTATTGTCCTTACC kefA 2617942 - 2614583 - | fused conserved hypothetical protein ; mechanosensitive channel protein acrR 2618715 - 2618068 - | DNA-binding transcriptional repressor TERM 3396 2618888 - 2618870 - g 93 -6 -5.17744 | ACATATGAACAAAAA CAGAGG ATTTACG CCTCTG GCGGCCGTTCTGTTG acrA 2618859 - 2620052 + | multidrug efflux system TERM 3397 2620201 - 2620162 - g 100 -15.8 -3.57144 | CTGGCGATCCTCAAA CTGCCGGTGGCGCAAT ATCCTACG ATTGCACCGCCGGCAG TAACGATCTCCGCCT acrB 2620075 - 2623224 + | multidrug efflux system protein TERM 3398 2623250 - 2623265 + F 100 -11.8 -4.56597 | AGAAGGTATTGTTAA GGCCGC GAAA GCGGCC TTTTTAGCGCCAAAA ybaJ 2623727 - 2624101 + | hypothetical protein hha 2624128 - 2624346 + | modulator of gene expression, with H-NS TERM 3399 2625264 - 2625243 - g 81 -4.3 -5.11937 | opp_overlap 2625244 2625251, overlap 2625244 AACAACTGCAAAAAA TGATCGCCC GCAA AGGCGACCT TTCGTTCTACGACAT ylaC 2624819 - 2625313 + | conserved hypothetical protein; putative inner membrane protein TERM 3400 2625355 - 2625323 - f 79 -7.8 -4.3534 | opp_overlap 2625327, overlap 2625327 GCGTAACGATGAAAA TACAGCGTACTGTA CTTGC TCCAGTACGCTTTA CCCTCAGCTGTCTTA TERM 3401 2625327 - 2625351 + F 73 -8.6 -3.60805 | opp_overlap 2625327 2625323 AACGATGAAAATACA GCGTACTGTA CTTGC TCCAGTACGC TTTACCCTCAGCTGT TERM 3402 2625351 - 2625327 - f 71 -8.6 -3.46345 | opp_overlap 2625327, overlap 2625323 AACGATGAAAATACA GCGTACTGTA CTTGC TCCAGTACGC TTTACCCTCAGCTGT EFER_2559 2625452 - 2627002 + | hypothetical protein ybaA 2627397 - 2627044 - | hypothetical protein EFER_2561 2627727 - 2627545 - | hypothetical protein TERM 3403 2627694 - 2627704 + gH 72 -6.8 -4.16016 | GCAACCCATTGCGTG CCAG ATG CTGG TTTCTTGCGCAATGC ybaZ 2627698 - 2628087 + | putative methylated DNA-protein cysteine alkyltransferase TERM 3404 2628155 - 2628180 + FH 100 -13.4 -5.61596 | opp_overlap 2628155 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT CGTTTCCGGA TTTTTTTATGCACAT TERM 3405 2628180 - 2628155 - fH 100 -13.4 -3.61398 | opp_overlap 2628155 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT CGTTTCCGGA TTTTTTTATGCACAT insG 2628188 - 2629516 + | putative IS4 transposase; KpLE2 phage-like element TERM 3406 2629527 - 2629498 - T 100 -9.3 -4.59109 | opp_overlap 2629499, overlap 2629500 CACAGCCCCGAAAAA GAGCCAGTCAGTT GCTT AACTGACTGGCAT TACTCCGGGCGGAGA TERM 3407 2629499 - 2629526 + T 95 -12.8 -3.14132 | opp_overlap 2629498 2629500 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCGGGCGGAG TERM 3408 2629525 - 2629500 - T 100 -16.3 -3.90762 | opp_overlap 2629499, overlap 2629498 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCGGGCGGA ybaY 2630128 - 2629556 - | putative lipoprotein TERM 3409 2630316 - 2630326 + H 74 -6.8 -4.24342 | overlap 2630314 AACTCACTTTGGCTT GCTG CGG CAGC TTTGTTACTGGAGAG tesB 2630346 - 2631206 + | acyl-CoA thioesterase II TERM 3410 2631212 - 2631238 + T 100 -9.5 -5.07053 | gap 1, opp_overlap 2631212 2631214, overlap 2631214 TCACAATTAAAAAAA TAGCCGGA-GGT GAAA ACCGTCCGGCTG TTTTTTGCAGTGCTT TERM 3411 2631238 - 2631212 - T 100 -7.3 -5.68023 | gap 1, opp_overlap 2631212 2631214, overlap 2631214 TCACAATTAAAAAAA TAGCCGGA-GGT GAAA ACCGTCCGGCTG TTTTTTGCAGTGCTT TERM 3412 2631236 - 2631214 - T 100 -9.9 -4.46828 | gap 1, opp_overlap 2631214 2631212, overlap 2631212 ACAATTAAAAAAATA GCCGGA-GGT GAAA ACCGTCCGGC TGTTTTTTGCAGTGC TERM 3413 2631214 - 2631236 + T 88 -9.9 -4.15748 | gap 1, opp_overlap 2631212 2631214, overlap 2631212 ACAATTAAAAAAATA GCCGGA-GGT GAAA ACCGTCCGGC TGTTTTTTGCAGTGC amtB 2632541 - 2631255 - | ammonium transporter TERM 3414 2632399 - 2632386 - G 70 -5.9 -4.15453 | overlap 2632378 TAACCCACCGTAAAA CAGGG CAAT CCCCG GAATAGTCATAAACA glnK 2632909 - 2632571 - | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB TERM 3415 2633053 - 2633030 - R 100 -8.9 -5.48213 | opp_overlap 2633030 GATTGAAAACAAAAA CGCACTATG ACAGTG CACAGTGCG TTACATTTTTGCACC mdlB 2634871 - 2633090 - | putative fused ATPase and permease component of metabolite ABC transporter mdlA 2636636 - 2634864 - | putative fused ATPase and permease component of metabolite transporter TERM 3416 2635921 - 2635935 + g 79 -3.5 -5.07486 | opp_overlap 2635919 2635921, overlap 2635919 AAACGGGCATCAATA CGTGC CACAC GCATG TTTTTCTTGCCAGTA ybaO 2637124 - 2636666 - | putative DNA-binding transcriptional regulator with homology to Lrp TERM 3417 2637259 - 2637244 - R 100 -11.8 -5.86332 | TCAACGCAAAAAAAA CCGGGC AATT GCCCGG TGCTGGAAGGGATCT cof 2638095 - 2637277 - | thiamin pyrimidine pyrophosphate hydrolase TERM 3418 2638616 - 2638600 - g 76 -10.8 -3.33261 | opp_overlap 2638591 2638580 2638606 2638608 CTCGAACCGTTACAA CCGGGC TTTTT GCCCGG CCGTGCCGAGCAGCA TERM 3419 2639547 - 2639529 - g 79 -2.2 -5.1925 | overlap 2639530 2639531 TCATAACGCAAAAAA CTGGGACG ACA CGACCCTA CTGGCACACGCAGAC ybaE 2638195 - 2639895 + | hypothetical protein TERM 3420 2639920 - 2639934 + F 100 -8.6 -4.89477 | CCGGGTTAATCGCAG GCGTTA CCA TAACGC TTTTATTGTTCAAGC queC 2639960 - 2640655 + | queuosine biosynthesis protein ybaW 2641105 - 2640707 - | hypothetical protein TERM 3421 2641178 - 2641148 - R 80 -11.3 -2.60486 | opp_overlap 2641152, overlap 2641147 AAGAACTGTTATAAG TGCAGAGGTCATA ACTGG TATGACCTCTTCA GTCTGGCAAAAATTT TERM 3422 2641152 - 2641174 + r 79 -10.7 -3.12351 | opp_overlap 2641148 2641147 ACTGTTATAAGTGCA GAGGTCATA ACTGG TATGACCTC TTCAGTCTGGCAAAA ybaV 2641654 - 2641211 - | hypothetical protein TERM 3423 2641672 - 2641687 + r 100 -11.8 -4.07618 | opp_overlap 2641672 TTCAGATTTGGAAAA GGCCGC GAAA GCGGCC TTTGGTTGTTACAGA TERM 3424 2641687 - 2641672 - R 100 -11.8 -4.13014 | opp_overlap 2641672 TTCAGATTTGGAAAA GGCCGC GAAA GCGGCC TTTGGTTGTTACAGA ppiD 2643651 - 2641735 - | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 3425 2642344 - 2642360 + g 72 -4.4 -4.72188 | overlap 2642345 TTCCGGCAGATTCTG TTGGCT AAACC AGCCAG TTTCTTTTGCCTTCA TERM 3426 2643763 - 2643744 - R 100 -10 -5.73978 | opp_overlap 2643744 2643743 ATCACAAATAAAAAA GGCACATC AGTT GATGCGCC CTTGTACTAAATCAC hupB 2644070 - 2643798 - | HU, DNA-binding transcriptional regulator, beta subunit TERM 3427 2644247 - 2644218 - R 100 -6.4 -5.61596 | opp_overlap 2644218 2644217 AGCGGTACAAAAAAA GGCTGGCAAG TGCCAAATGG CGTGCCAGCC CTGTTTTTATTAGTG lon 2646634 - 2644280 - | DNA-binding ATP-dependent protease La TERM 3428 2644384 - 2644411 + g 72 -4.8 -4.72007 | opp_overlap 2644384 CCAGATCGGCAATCA CGTTGTCAGGAA TCTC TTCCAGATCACG TTTATTTTCGTAAGG TERM 3429 2644639 - 2644651 + g 75 -5.5 -4.72986 | CTTCCGGTACGTGGA CGTGA ATG TCGCG TTTTTCGTAAAAATC TERM 3430 2645341 - 2645352 + g 70 -4.4 -4.45485 | opp_overlap 2645349 CCGGATCGCCACGCA TGTC AGAA GACA TTTTGTCGATCTCAT TERM 3431 2645683 - 2645699 + g 82 -9.4 -4.17355 | overlap 2645688 2645698 CGGTATCAAGGATTT CCTGCG CCTGA CGCAGG TCTTTTTTGACCTTG TERM 3432 2645688 - 2645701 + g 77 -3.1 -5.10029 | gap 1, overlap 2645683 2645698 TCAAGGATTTCCTGC G-CCTG ACG CAGGTC TTTTTTGACCTTGCT TERM 3433 2646793 - 2646765 - R 91 -8.2 -4.66953 | opp_overlap 2646770, overlap 2646770 GGAATAGCGGAAAAA TAAAAGGGGAGA TGTAT TCCCCCCTTTTT GATAAACCAACGTTA TERM 3434 2646788 - 2646770 - R 100 -8.1 -5.27023 | opp_overlap 2646770, overlap 2646765 AGCGGAAAAATAAAA GGGGAGA TGTAT TCCCCCC TTTTTGATAAACCAA TERM 3435 2646770 - 2646788 + r 75 -5.9 -4.72272 | opp_overlap 2646765 2646770 AGCGGAAAAATAAAA GGGGAGA TGTAT TCCCCCC TTTTTGATAAACCAA clpX 2648095 - 2646821 - | ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease clpP 2648844 - 2648221 - | proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases TERM 3436 2649055 - 2649032 - R 100 -12.4 -5.9873 | opp_overlap 2649032 2649031 TCATGACAAAAAAAA GCCCACCACC TGGA GGTGACGGGC CTTCGTGCGTAGTGC tig 2650387 - 2649089 - | peptidyl-prolyl cis/trans isomerase (trigger factor) TERM 3437 2649740 - 2649778 + g 72 -8.8 -3.76379 | overlap 2649749 GTAGTCTTCCGGGAA GGTCACGTCGATGGTGAA CTC TTCGCCAGCTTTGTGACC TTTGATACCGTCTTC TERM 3438 2650669 - 2650656 - R 100 -9.5 -5.93809 | opp_overlap 2650656 TTCCGACAAAAAAAA CGGCC CGCA GGCCG TTTCGTCAAACTCGG TERM 3439 2650656 - 2650669 + r 78 -9.5 -3.73775 | opp_overlap 2650656 TTCCGACAAAAAAAA CGGCC CGCA GGCCG TTTCGTCAAACTCGG bolA 2651045 - 2650728 - | regulator of penicillin binding proteins and beta lactamase transcription (morphogene) TERM 3440 2651625 - 2651610 - g 71 -3.2 -4.85782 | opp_overlap 2651610 2651606 2651605, overlap 2651606 TGCTGGAAAAACAAA TGACCG CGCG CGGTTA TATGGTTGGTCCTAA yajG 2651348 - 2651926 + | putative lipoprotein ampG 2651970 - 2653445 + | muropeptide transporter cyoA 2654088 - 2655035 + | cytochrome o ubiquinol oxidase subunit II TERM 3441 2656830 - 2656820 - g 72 -4.6 -4.61231 | opp_overlap 2656820 2656827 TCATATGCCGAAAAA CAGC GGT GCCG GTATCGTCATTGCGG TERM 3442 2657011 - 2656984 - g 76 -9.2 -3.85698 | opp_overlap 2656991, overlap 2656992 TGCCGGTGGCAGAAA TCGAAAAACTGG AAAA CCAGCATTTCGA TGAGATTACTAAGGC TERM 3443 2657003 - 2656992 - g 81 -5.8 -4.84529 | opp_overlap 2656991, overlap 2656984 GCAGAAATCGAAAAA CTGG AAAA CCAG CATTTCGATGAGATT cyoB 2655057 - 2657048 + | cytochrome o ubiquinol oxidase subunit I TERM 3444 2657341 - 2657324 - g 100 -8.4 -5.18715 | opp_overlap 2657325 ACAAAAACAACAAAA GCCAGG TTATCT CCTGGC TGGCGTTGACCTGGT TERM 3445 2657325 - 2657355 + G 72 -7.5 -4.00042 | opp_overlap 2657324 CAAAAACAACAAAAG CCAGGTTATCTCC TGGCT GGCGTTGACCTGG TTGTTTGGTGCCGGA cyoC 2657038 - 2657652 + | cytochrome o ubiquinol oxidase subunit III cyoD 2657652 - 2657981 + | cytochrome o ubiquinol oxidase subunit IV TERM 3446 2658072 - 2658092 + G 74 -9.7 -3.45386 | overlap 2658062 TGATTGGGGGATTCT TGCTGGCCT CAA AGGGCAGCA TTGATTATCCCCTGT cyoE 2657993 - 2658883 + | protoheme IX farnesyltransferase TERM 3447 2658921 - 2658904 - T 81 -5.5 -5.14965 | opp_overlap 2658904 ATCGTCATCAAAAAA CCCGC TTACTCTG GCGGG TTTTTTATTGCCCCT TERM 3448 2658904 - 2658921 + T 91 -6.2 -5.45652 | opp_overlap 2658904 ATCGTCATCAAAAAA CCCGCT TACTCT GGCGGG TTTTTTATTGCCCCT EFER_2590 2660796 - 2659258 - | putative periplasmic protein TERM 3449 2660299 - 2660312 + g 75 -5.3 -4.614 | opp_overlap 2660299 AACAAAACGGAGAAA CTCAT GGCG ATGAG TTTTATCTGCTTCGG EFER_2591 2661613 - 2660855 - | Regulatory proteins, IclR family EFER_2592 2661723 - 2662586 + | putative dehydrogenase, similar to shikimate dehydrogenase TERM 3450 2662609 - 2662640 + GF 84 -10.8 -3.5882 | overlap 2662610 GGATGTCGTTGTCAT TGGTAGCGGCGCAG CAGG CTTTGCCGCTGCCG TTTCCGCCTGCTGTA TERM 3451 2662610 - 2662639 + GF 83 -12.1 -2.7497 | overlap 2662609 GATGTCGTTGTCATT GGTAGCGGCGCAG CAGG CTTTGCCGCTGCC GTTTCCGCCTGCTGT TERM 3452 2663533 - 2663543 + GF 71 -6.8 -4.14541 | CCCTTCTAATTTCTT CTGG GCG CCAG TTTCTGTACTTCGTC EFER_2593 2662487 - 2664259 + | putative 3-oxosteroid 1-dehydrogenase EFER_2594 2664213 - 2664593 + | hypothetical protein TERM 3453 2664661 - 2664683 + G 74 -7.6 -4.07687 | opp_overlap 2664674 GGTGCGGCTGGTTTA TCAGCGGCAG TAA CTGCCGCCCA TTTTGGCGCCAAAGT EFER_2595 2664604 - 2666307 + | conserved hypothetical protein; putative exported protein TERM 3454 2667009 - 2666974 - gf 70 -5.4 -4.36914 | overlap 2666976 2666978 TGCCCCGGCACAAAA CCCACATGACGAAAAA GAAA TTATTCGTCAGGCGCG TACAGCACGCCAGAT EFER_2596 2666375 - 2667193 + | hypothetical protein TERM 3455 2667630 - 2667643 + GF 71 -2.3 -4.90079 | TCAGAATATGCCCCT GAACG TAAG CGCTC TTTTATTATTACGAT EFER_2597 2667093 - 2668568 + | 4-hydroxybenzoate transporter TERM 3456 2668628 - 2668587 - f 88 -10.9 -3.88766 | opp_overlap 2668584 2668588 2668601 2668624, overlap 2668588 ACTCCATACAGCAAA TCTTGAGCGCTAAAGTCAG ATTA CTGGCTTTAGCGCACAAAT CATTAATCGAATTAA TERM 3457 2668627 - 2668588 - f 100 -14.4 -2.92777 | opp_overlap 2668584 2668588 2668601 2668624, overlap 2668587 CTCCATACAGCAAAT CTTGAGCGCTAAAGTCAG ATTA CTGGCTTTAGCGCACAAA TCATTAATCGAATTA TERM 3458 2668588 - 2668627 + F 100 -14.4 -2.79023 | opp_overlap 2668588 2668587, overlap 2668584 2668601 2668624 CTCCATACAGCAAAT CTTGAGCGCTAAAGTCAG ATTA CTGGCTTTAGCGCACAAA TCATTAATCGAATTA TERM 3459 2668792 - 2668804 + G 74 -7.7 -4.1021 | overlap 2668788 CGTATTTTCATTGCG CATGC TGG GCATG TTTATGGTTCTGCCG TERM 3460 2668891 - 2668907 + G 95 -10.1 -4.67234 | overlap 2668892 TGCCATTGGTATTTA TGGCCTG ACT CAGGCCG TTTTTCAGATTCCGT TERM 3461 2668892 - 2668906 + G 80 -11.4 -3.39618 | overlap 2668891 GCCATTGGTATTTAT GGCCTG ACT CAGGCC GTTTTTCAGATTCCG TERM 3462 2669635 - 2669651 + G 71 -2.1 -4.99645 | overlap 2669637 GCAGTTCTGGCAACT GGTGCTC GGC GTGCAGC TTTTCTTTGTGGCGT yajR 2668721 - 2670085 + | putative transporter, major facilitator family yajQ 2670704 - 2670213 - | putative nucleotide binding protein (UPF0234 protein) TERM 3463 2670780 - 2670766 - H 76 -10 -3.38135 | opp_overlap 2670762 2670778, overlap 2670764 GTTAAATAACCAACA GTCCTG CAC CAGGAC GTATCCCTTAATTGT TERM 3464 2670778 - 2670832 + H 100 -12.5 -3.61398 | gap 2, opp_overlap 2670766 2670764 2670821, overlap 2670762 2670781 ACAGTCCTGCACCAG GACGTATCCCTTAATTGTGCATAGTCG CAA CAGC-ATGCACAATTAAGGGATA-GCC TTATTGAACACCCGG TERM 3465 2670781 - 2670831 + H 93 -13.7 -2.76696 | opp_overlap 2670821, overlap 2670762 2670778 GTCCTGCACCAGGAC G-TATCCCTTAATTGTGCATAGTCG CAA CAGC-ATGCACAATTAAGGGATAGC CTTATTGAACACCCG panE 2670872 - 2671783 + | 2-dehydropantoate reductase, NADPH-specific yajL 2671746 - 2672336 + | hypothetical protein TERM 3466 2672376 - 2672353 - T 100 -15.4 -3.56643 | overlap 2672370 GTCAGATGCGGCAAA CGTCGCATCT GACC AGATGCGACG TCACAACCACAAATT thiI 2673838 - 2672390 - | sulfurtransferase required for thiamine and 4-thiouridine biosynthesis TERM 3467 2673654 - 2673666 + g 81 -9.1 -4.07678 | opp_overlap 2673654, overlap 2673642 AGGGCGTCGCGAATA GCCAG ACG CTGGC TTTCATCTTTTGCGC xseB 2674044 - 2674286 + | exonuclease VII small subunit ispA 2674286 - 2675185 + | geranyltranstransferase TERM 3468 2676077 - 2676062 - g 82 -3.2 -5.19212 | opp_overlap 2676051, overlap 2676064 ATCATGACCAAAAAA GGTCGT GGTT ACGAAC CGGCAGAAAAAGATC TERM 3469 2676899 - 2676886 - g 75 -5.2 -4.69053 | CACCATTGAAGAAAA CGCC ATTATG GGCG GTGCAGGCAGCGGCG dxs 2675210 - 2677072 + | 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring TERM 3470 2677778 - 2677768 - g 81 -6.8 -4.66833 | CTGGAACTGCAAAAA CAGC ACG GCTG GGCGCAGTTTGTCAG yajO 2677252 - 2678226 + | aldoketo-oxidoreductase, NADP-binding TERM 3471 2678272 - 2678230 - T 71 -8.4 -3.47029 | overlap 2678224 2678231 2678265 GGATTTAAATAGGAA TCCAGGCCTGATGAGACG TGACAAG CGTCACATCAGGCGTAGG TGCACAGCTACGACA TERM 3472 2678271 - 2678231 - T 83 -11.9 -2.67735 | overlap 2678230 2678224 2678265 GATTTAAATAGGAAT CCAGGCCTGATGAGACG TGACAAG CGTCACATCAGGCGTAG GTGCACAGCTACGAC pgpA 2678798 - 2678280 - | phosphatidylglycerophosphatase A TERM 3473 2678679 - 2678659 - G 100 -13.3 -4.04719 | ATCAGATACCAGAAA GGGATCGCC GCC AGCGATCCC ATCGTACCAGGAACA thiL 2679753 - 2678776 - | thiamin-monophosphate kinase TERM 3474 2678835 - 2678815 - G 73 -9 -3.64703 | TCCTTTCCAGTCAAA CGTGACAG GTTCG CCGTCACG GGTAAAATTGACGCC TERM 3475 2679824 - 2679784 - R 100 -9.8 -5.43553 | gap 2 AGGTAAAAAAGAAAA GGCCGG-GGAGTA-CGGATA AAT TTTCCGCTACTCTACCGGCC TGGATATCACTTTTT nusB 2680250 - 2679831 - | transcription antitermination protein ribE 2680740 - 2680270 - | riboflavin synthase beta chain TERM 3476 2680316 - 2680332 + g 70 -6.5 -4.17132 | overlap 2680317 ATTTCAAGCGCGGTC AGTGCAG CTT CTGCACC TTTGTTGCCAGCTTT ribD 2681931 - 2680828 - | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase nrdR 2682384 - 2681935 - | transcriptional repressor of nrd genes TERM 3477 2683024 - 2683037 + G 71 -3.1 -4.78753 | CTGAACGGTATTTCC CCTGA TCAG TTAGG TTTTGTTCGTATTCA yajI 2682475 - 2683077 + | putative lipoprotein tsx 2683375 - 2684259 + | nucleoside channel, receptor of phage T6 and colicin K TERM 3478 2684289 - 2684269 - T 81 -11.2 -3.31144 | opp_overlap 2684269 TTCTGATTGTGAGAA TGCCGGAT TTCAT ATCCGGCA TTTTTTATCACTTCT TERM 3479 2684269 - 2684289 + T 100 -11.2 -5.3236 | opp_overlap 2684269 TTCTGATTGTGAGAA TGCCGGAT TTCAT ATCCGGCA TTTTTTATCACTTCT yajD 2684644 - 2684297 - | hypothetical protein TERM 3480 2684748 - 2684729 - R 100 -10 -5.92337 | opp_overlap 2684729 ATACATCAAAAAAAA TCCCGATC TTCT GACCGGGA TTTTCAACATCAGCT TERM 3481 2684729 - 2684748 + r 76 -7.8 -4.11394 | opp_overlap 2684729 ATACATCAAAAAAAA TCCCGATC TTCT GACCGGGA TTTTCAACATCAGCT secF 2685744 - 2684773 - | SecYEG protein translocase auxillary subunit secD 2687602 - 2685755 - | SecYEG protein translocase auxillary subunit TERM 3482 2686508 - 2686523 + g 71 -9 -3.54029 | opp_overlap 2686502 CACAAACAGGGTCGC CATCGG TTTG CCGATG TTGTCCTTAGTGAAG yajC 2687962 - 2687630 - | SecYEG protein translocase auxillary subunit tgt 2689112 - 2687985 - | tRNA-guanine transglycosylase TERM 3483 2689180 - 2689156 - R 73 -9.9 -2.92667 | opp_overlap 2689156, overlap 2689153 CCAACGTTTAAACCA GCGCCGCGGAA TTA CTCCCCGACGC GCTCATTAATTGCCT queA 2690237 - 2689167 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 3484 2689418 - 2689428 + g 72 -5.4 -4.57569 | CGTCAAAGAACGGTT CGAT GAG ATCG TTTTTCGCCGCCTGG TERM 3485 2689701 - 2689721 + g 72 -4.6 -4.70659 | gap 1, opp_overlap 2689688 2689687 2689691, overlap 2689701 2689704 ATGCAGCCCGGCAGT CGGGGCCGC TACC GCG-CCCGG TTTTTCACTATAAAC acpH 2690330 - 2690911 + | acyl carrier protein phosphodiesterase malZ 2692733 - 2690916 - | maltodextrin glucosidase TERM 3486 2691138 - 2691160 + g 82 -2.6 -5.41143 | gap 1, overlap 2691143 ATACAGTACCTGACA GCCACCGCG ACGCAG CGCCG-GGC TTTTTTTACGCAATG TERM 3487 2692881 - 2692833 - R 74 -9.6 -3.28924 | gap 1, overlap 2692844 GACGGGGGCGGATAA CTTTCGGAATAGCCGGATCAGGG CTTG CCTTGATCCGGCT-TACAGAACG CAAGGATTACTGGTT TERM 3488 2692871 - 2692844 - R 100 -15.6 -3.03338 | overlap 2692833 ATAACTTTCGGAATA GCCGGATCAGGG CTTG CCTTGATCCGGC TTACAGAACGCAAGG proY 2694261 - 2692888 - | proline transporter TERM 3489 2694315 - 2694292 - RH 100 -15.3 -5.64304 | CAACACAATAAAAAA CCACGGGGC ATCGCA GCCCCGTGG TCAAAAACACATTGT brnQ 2695657 - 2694338 - | branched chain amino acid transporter (LIV-II) EFER_2625 2695649 - 2695849 + | hypothetical protein TERM 3490 2696035 - 2696014 - TR 100 -13.1 -4.93288 | opp_overlap 2696017 AAGACGCAAAGAAAA TAAGCCAGC ATTA GCTGGCTTA TGGAAAGATAATCTG TERM 3491 2696017 - 2696032 + Tr 78 -10.4 -3.2963 | opp_overlap 2696014 ACGCAAAGAAAATAA GCCAGC ATTA GCTGGC TTATGGAAAGATAAT phoR 2697357 - 2696062 - | sensory histidine kinase in two-component regulatory system with PhoB TERM 3492 2696868 - 2696885 + g 75 -5.5 -4.68593 | ATACCAAATTAATTG GTCGTGA AAAA TCGCGGC TTTTTAGATAATGGG TERM 3493 2697414 - 2697386 - R 100 -22.5 -4.05033 | TTTACTCTATAGAAA GCCTCACCCGCCA TTA CGGCGGGTGAGGC GTCAAAAGCGGGTCG phoB 2698105 - 2697416 - | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) TERM 3494 2698019 - 2698031 + g 76 -7.7 -4.25104 | ATCTTCGGCTTCTAC TGGCT GAA AGCCA TTTTGCTCGAGCACG TERM 3495 2698754 - 2698740 - g 77 -6.4 -4.67353 | TCAGGCAGTGAAAAA CAGCAA CAT CTGCTG GCCACAATCACGGAC sbcD 2698251 - 2699495 + | exonuclease, dsDNA, ATP-dependent TERM 3496 2699958 - 2699971 + G 76 -8.1 -4.24342 | opp_overlap 2699958 2699957, overlap 2699945 TGCTGCTTTCACAAG GGCAG TTCG CTGCC TTTCTTAATGCAAAA EFER_2629 2699492 - 2702635 + | Exonuclease sbcC TERM 3497 2702669 - 2702636 - Tf 72 -7.3 -3.9392 | gap 1, overlap 2702639 TTCCAGGTGAAATAA GCACGCCCCGGCGG TTACGTG CCGCCGGGT-GAGC CTGAAACCAGCAGTT mak 2703804 - 2702752 - | manno(fructo)kinase TERM 3498 2704346 - 2704310 - gR 77 -10.2 -3.08471 | gap 1, opp_overlap 2704304 2704303, overlap 2704314 GAGAATCCGATTGAA CTGACGCTAACCGAATG GGTA CGTTCGGGTAGCG-CAG CACAAGGTTTCCAGT TERM 3499 2704343 - 2704314 - gR 76 -10.7 -2.55015 | opp_overlap 2704304 2704303, overlap 2704310 ATCCGATTGAACTGA CGCTAACCGAATG GGTA CGTTCGGGTAGCG CAGCACAAGGTTTCC rdgC 2703791 - 2704702 + | DNA-binding protein, non-specific TERM 3500 2704712 - 2704733 + Tr 80 -11.6 -2.61728 | opp_overlap 2704710 2704712, overlap 2704711 CGTTAAACTGAAATA CCCTCTCC TGTTAC GGAGAGGG ATTGCTGTTACAAAT TERM 3501 2704733 - 2704712 - TR 89 -11.6 -3.50832 | opp_overlap 2704712 2704711, overlap 2704710 CGTTAAACTGAAATA CCCTCTCC TGTTAC GGAGAGGG ATTGCTGTTACAAAT yaiE 2705025 - 2704741 - | hypothetical protein EFER_2633 2705773 - 2705096 - | AroM protein yaiA 2706211 - 2706020 - | hypothetical protein TERM 3502 2706126 - 2706157 + g 71 -2.3 -4.95155 | gap 1, opp_overlap 2706129 2706134, overlap 2706130 2706131 TGATCTGCCCTTAAC TGATA-CCAGGTCA CGGTC TGACCTGGATTTCC TTTTTCTACTGTCAC TERM 3503 2706130 - 2706152 + g 78 -7.7 -4.3902 | opp_overlap 2706129 2706134, overlap 2706126 2706131 CTGCCCTTAACTGAT ACCAGGTCA CGGTC TGACCTGGA TTTCCTTTTTCTACT TERM 3504 2706131 - 2706151 + g 74 -11.2 -3.21785 | opp_overlap 2706129 2706134, overlap 2706130 2706126 TGCCCTTAACTGATA CCAGGTCA CGGTC TGACCTGG ATTTCCTTTTTCTAC aroL 2706784 - 2706239 - | Shikimate kinase II (SKII) TERM 3505 2706717 - 2706698 - G 81 -10 -3.92075 | opp_overlap 2706712, overlap 2706714 ATCGGTATCGACAAA CCGACGCT CCAG AGCATCGG CCAGTGCTTTGCCGA yaiI 2707424 - 2706960 - | hypothetical protein proC 2707566 - 2708375 + | pyrroline-5-carboxylate reductase, NAD(P)-binding TERM 3506 2708381 - 2708425 + T 73 -8.4 -3.66401 | opp_overlap 2708371, overlap 2708380 2708420 TAAATCCTGAGTCTG GTGCCGGACGTCAGGCCGCC ACTTC GGTGCGATTACGTCCGGCGC TCTTTGCTTTGTAGA yaiC 2709590 - 2708391 - | putative diguanylate cyclase TERM 3507 2708542 - 2708528 - G 70 -6.4 -4.23999 | TGATACGTAAAATAA CTTGCG GGG CACAAG ACAAACGCAAATGCG TERM 3508 2709452 - 2709464 + g 74 -3.3 -5.01732 | overlap 2709419 2709453 AAGGTGGTTCTTCAC CCGGT GCG ACCGC TTTTTTAAGGAAGTT psiF 2709931 - 2709611 - | phosphate starvation-inducible protein TERM 3509 2709964 - 2710003 + r 77 -8.6 -3.9534 | gap 1, overlap 2709944 2709943 2709969 AGGTTGCAACTTCAC CAGTTTCCTTCGGGCCGGA AAA TACG-CCCGAAGGATAGTG TTTATAAGTCTGGCT TERM 3510 2709969 - 2709998 + r 83 -11.5 -2.90511 | gap 1, overlap 2709964 GCAACTTCACCAGTT TCCTTCGGGCCGGA AAA TACG-CCCGAAGGA TAGTGTTTATAAGTC TERM 3511 2710069 - 2710035 - R 100 -9.4 -5.03314 | opp_overlap 2710034 2710035, overlap 2710039 CTGATGGTGAAAAAA CCAC-CCGACGGCGCA ATTAA TG-GCCGTCGGTATGG ATTATTGCAAGCCCA TERM 3512 2710064 - 2710039 - R 76 -11.2 -2.62111 | gap 1, opp_overlap 2710035 2710034, overlap 2710035 TGGTGAAAAAACCAC CCGACGGCGCA ATTAA TG-GCCGTCGG TATGGATTATTGCAA phoA 2711489 - 2710071 - | bacterial alkaline phosphatase TERM 3513 2710779 - 2710792 + g 72 -5.3 -4.56597 | CTCTCCAGCGGTTGC CGTTT CAGC AAACG TTTTTGCACCACCAC yaiB 2711848 - 2711588 - | hypothetical protein TERM 3514 2711991 - 2711972 - H 74 -10 -3.11182 | opp_overlap 2711972 2711971, overlap 2711970 2711969 TCTTAACACAAATTA GCGCGAAA CGTT TCTCGCGC ATTATAATTCCACGA TERM 3515 2712411 - 2712389 - g 91 -7.8 -5.055 | overlap 2712391 GCAATCGGCAAAAAA TATTGTCGAT GCC ATCGACAAAA CCCGCTTTGACGTCG TERM 3516 2712409 - 2712391 - g 85 -10.4 -4.15235 | overlap 2712389 AATCGGCAAAAAATA TTGTCGAT GCC ATCGACAA AACCCGCTTTGACGT TERM 3517 2712676 - 2712689 + G 70 -6.7 -4.00468 | AGGGTATGTTGCGTG TGGCA AATC TGCCA TTTGTCGGTTCTGAT ddlA 2712312 - 2713406 + | D-alanine-D-alanine ligase A TERM 3518 2713415 - 2713438 + T 100 -16.8 -4.89233 | opp_overlap 2713426 AATGTAATTTTTTTC GCCCGGTAAC ACCT GTTACCGGGC TTTTTCCTCTTCATC yaiZ 2713642 - 2713430 - | conserved hypothetical protein; putative inner membrane protein TERM 3519 2714200 - 2714175 - g 83 -13.3 -3.03159 | GTAATTGCGGCAATA TTGCGTTGGCG CCAC CGCCAACGCTA AGTAATCACTGCATA EFER_2644 2713740 - 2714201 + | hypothetical protein yaiW 2715297 - 2714206 - | putative lipoprotein TERM 3520 2714317 - 2714333 + g 74 -3 -4.93365 | gap 1, overlap 2714317 2714318 TGGTAATAACGCTTT C-GGCAA TGGT TTGCCCG TTTTTGCTTCTGCCA TERM 3521 2715151 - 2715161 + g 74 -3.2 -5.00616 | ATCCCGGTCTTTTAC TGTC GCG GGCA TTTTTTGCCGCACAA sbmA 2716529 - 2715309 - | transporter involved in cell envelope modification TERM 3522 2716515 - 2716497 - G 100 -7.5 -5.63517 | overlap 2716490 TGCCGAAAGAAAAAA TTTCCCA GGCTT TGGGAAA AAAGACTTAAACATG ampH 2717029 - 2718195 + | beta-lactamase/D-alanine carboxypeptidase yaiV 2718864 - 2718196 - | hypothetical protein TERM 3523 2718840 - 2718863 + g 100 -15.4 -4.15396 | opp_overlap 2718840 CTTTCCTTGCAACAA TGCCCGTCAA TTTC TTGACGGGCA TTATTTAGTTTAAAC TERM 3524 2718863 - 2718840 - G 100 -15.4 -3.61398 | opp_overlap 2718840 CTTTCCTTGCAACAA TGCCCGTCAA TTTC TTGACGGGCA TTATTTAGTTTAAAC TERM 3525 2718888 - 2718902 + r 73 -7.2 -4.16284 | TTAAACAACCCGATA TTTCTC TAA GAGAAA TTTATTACCAGGTAT EFER_2649 2721915 - 2718907 - | Putative flagellin structural protein ; putative exported protein TERM 3526 2719890 - 2719912 + g 71 -2.6 -4.98255 | GGTCAGCTTTGTTAG CAGCAGAGAA GGT TGCGTTGCTG TTTTTGTCGTTAACG TERM 3527 2722269 - 2722242 - H 75 -5.8 -4.68908 | gap 1, overlap 2722231 TTTACGCAAAATAAA TACATTGC-GAAT ATA ATTCAGCAATATA AATAATTCTAAGAAA TERM 3528 2722587 - 2722558 - g 72 -8 -3.99592 | overlap 2722545 ATCGACGATTACAAA GC-CATCGACGCCA TGCC TGGCGT-GATGCGC ATCCCGGAGAAGTAT hemB 2722423 - 2723397 + | porphobilinogen synthase TERM 3529 2723407 - 2723432 + T 100 -13.3 -5.24129 | overlap 2723408 CGTTGATGGTTATCT CGCCGGGTAAG TCAC CTTACCCGGCA TTTTTTATCCCGCCC TERM 3530 2723408 - 2723431 + T 100 -16.8 -3.73995 | overlap 2723407 GTTGATGGTTATCTC GCCGGGTAAG TCAC CTTACCCGGC ATTTTTTATCCCGCC tauD 2724288 - 2723437 - | taurine dioxygenase, 2-oxoglutarate-dependent tauC 2725112 - 2724285 - | taurine transporter subunit ; membrane component of ABC superfamily TERM 3531 2724372 - 2724354 - G 77 -6 -4.68655 | CAACTCTAAAAGAAA GGCGATTA CCG CAATCACC GCGATTCCCGCCAGC tauB 2725888 - 2725109 - | taurine transporter subunit ; ATP-binding component of ABC superfamily TERM 3532 2725558 - 2725570 + g 71 -3.3 -4.74103 | TCTGTTGTGCTACTT GCACA CGT TGCGC TTTTTCCATTCCCGC tauA 2726850 - 2725888 - | taurine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3533 2727396 - 2727409 + H 71 -6.7 -4.2028 | opp_overlap 2727393 2727388 2727396, overlap 2727389 CCAGATATTAAATAT TCCTG ATCC CAGGA TTATTTATATCTCTC TERM 3534 2727969 - 2727982 + G 76 -8.1 -4.21141 | opp_overlap 2727968 2727969 TTTCGGCTATGAAAC GCCAG GCAC CTGGC TTTCATTTATTCCAC yaiS 2727499 - 2728182 + | hypothetical protein TERM 3535 2728285 - 2728307 + F 100 -10.5 -4.93365 | GAATTCTGATTCCTC TGCCGCCTG GAACA CTGGCGGCA TTTTTCCTTATCAGC TERM 3536 2729165 - 2729155 - g 78 -8.2 -4.20696 | overlap 2729147 GCAGGAAGGCGAAAA CCGC CTG GCGG TAATGGTGCTGCGCT EFER_2656 2728442 - 2731675 + | Beta-galactosidase (Lactase) TERM 3537 2731707 - 2731677 - T 95 -11.3 -3.86346 | gap 1 TGAGCTGGCGATAAA TGTCGGATGCG-TC ACGC GAGCACATCCGACA ACGCCTTACTCTTCC prpE 2733599 - 2731713 - | propionyl-CoA synthetase TERM 3538 2733029 - 2733048 + g 76 -12.8 -2.60079 | opp_overlap 2733028 2733026 2733027, overlap 2733025 2733027 CCACCAGCAAAACGT GGCGCGGC TGAT GCTGCGCC TGACTTATCGCATCG TERM 3539 2733390 - 2733432 + g 80 -12 -3.29461 | gap 1, opp_overlap 2733380 2733390 2733391, overlap 2733391 2733391 2733393 AGAGACGGCAATTAA TGCCAGCG-CCTCTGGCTG TTTCTC CAGCCAGCGGTCGATGGCG TTATGACACAAATTG TERM 3540 2733432 - 2733390 - G 72 -9.8 -3.37053 | gap 1, opp_overlap 2733390 2733391 2733391 2733393, overlap 2733380 2733391 AGAGACGGCAATTAA TGCCAGCG-CCTCTGGCTG TTTCTC CAGCCAGCGGTCGATGGCG TTATGACACAAATTG TERM 3541 2733431 - 2733391 - G 81 -13.3 -2.6175 | gap 1, opp_overlap 2733391 2733391 2733390 2733393, overlap 2733380 2733390 GAGACGGCAATTAAT GCCAGCG-CCTCTGGCTG TTTCTC CAGCCAGCGGTCGATGGC GTTATGACACAAATT TERM 3542 2733391 - 2733431 + g 81 -13.3 -2.57463 | gap 1, opp_overlap 2733380 2733390 2733391, overlap 2733390 2733391 2733393 GAGACGGCAATTAAT GCCAGCG-CCTCTGGCTG TTTCTC CAGCCAGCGGTCGATGGC GTTATGACACAAATT prpD 2735090 - 2733639 - | 2-methylcitrate dehydratase prpC 2736293 - 2735124 - | 2-methylcitrate synthase prpB 2737228 - 2736338 - | 2-methylisocitrate lyase TERM 3543 2736432 - 2736444 + g 70 -5.5 -4.43501 | TTGCGGGTCTGCATG GTGTC GAT GACGC TTTTCTGCGTGCCTT TERM 3544 2736900 - 2736910 + g 72 -8.2 -3.80862 | opp_overlap 2736896 TCAATATGTAAGCCC GCCG CAC CGGC TTTAATCATCGATTT TERM 3545 2738719 - 2738735 + G 72 -5 -4.65747 | overlap 2738709 2738717 TGAAAGTGTCACTGG CGGCAC TTACT GCGCCG TTTTCTTCCGCGTTA prpR 2737467 - 2739053 + | DNA-binding transcriptional activator TERM 3546 2739087 - 2739056 - T 83 -9.4 -3.99805 | opp_overlap 2739056 GCTGAAAAACTGAAA TGCCGAATCCAGCG ATAA CGCTTTATCCGGCA TAAATTTCAATAGAT yahO 2739426 - 2739151 - | hypothetical protein TERM 3547 2739572 - 2739593 + H 78 -8.9 -3.89822 | opp_overlap 2739572 CGATTTTTACAGAAA TATGATGAA GTTA TTCATCATA TTTATGGAATGACTC TERM 3548 2739593 - 2739572 - H 80 -8.9 -4.04206 | opp_overlap 2739572 CGATTTTTACAGAAA TATGATGAA GTTA TTCATCATA TTTATGGAATGACTC yahN 2739612 - 2740244 + | neutral amino-acid efflux system TERM 3549 2740874 - 2740828 - g 71 -9.4 -3.54436 | overlap 2740819 2740872 GATACAGCCATAGAA GCAATGACGGCATCTTACTCGC CAA GCGTGCAAAATTCAGTCAATGC CGAAGAGCAATACCG EFER_2664 2740351 - 2741769 + | hypothetical protein EFER_2665 2741864 - 2742535 + | putative gntR family regulatory protein TERM 3550 2742550 - 2742583 + T 100 -11.1 -4.81083 | opp_overlap 2742556, overlap 2742551 2742556 ACCTTTTCTGCGCTA AAAAAACGCGTAGTG AATT CACTACGCGTTTTGA TTTTTGCTAATTAAA TERM 3551 2742551 - 2742582 + T 100 -14.6 -3.47927 | opp_overlap 2742556, overlap 2742550 2742556 CCTTTTCTGCGCTAA AAAAACGCGTAGTG AATT CACTACGCGTTTTG ATTTTTGCTAATTAA TERM 3552 2742556 - 2742577 + T 100 -14.5 -4.80167 | opp_overlap 2742556, overlap 2742551 2742550 TCTGCGCTAAAAAAA CGCGTAGTG AATT CACTACGCG TTTTGATTTTTGCTA TERM 3553 2742577 - 2742556 - T 100 -14.5 -5.40072 | opp_overlap 2742551 2742550 2742556 TCTGCGCTAAAAAAA CGCGTAGTG AATT CACTACGCG TTTTGATTTTTGCTA EFER_2666 2743619 - 2742594 - | putative L-threonine 3-dehydrogenase TERM 3554 2743196 - 2743219 + gT 70 -4.6 -4.47551 | CAGCCAGTGGCGCCA TTTCTGACGG TACA TTGTCAGGAA TTTTGTGAATTAAGT EFER_2667 2744880 - 2743591 - | Hexuronate transporter TERM 3555 2744755 - 2744725 - GR 71 -2 -4.9445 | gap 1, overlap 2744715 ATAACCAACGAAAAA TGC-GCTGAAA ATCATCCCCA TTTCAGCAGCA TTAAAGCCTAACTCT TERM 3556 2744893 - 2744921 + r 76 -7.6 -4.11625 | gap 1, overlap 2744895 CATGATATTTCCTCT TGTTGTGGTCTAG CGGC CT-GACCACAATA TTTAATATTTATTTT TERM 3557 2744895 - 2744919 + r 70 -8 -3.61641 | gap 1, overlap 2744893 TGATATTTCCTCTTG TTGTGGTCTAG CGGC CT-GACCACAA TATTTAATATTTATT EFER_2668 2746721 - 2745180 - | conserved hypothetical protein; putative exported protein TERM 3558 2745938 - 2745949 + g 70 -5.8 -4.16016 | opp_overlap 2745935, overlap 2745932 CACCATTAGCAATCG CCCT GCGA AGGG TTTCTTCAGGAGTAC TERM 3559 2746171 - 2746160 - G 70 -4.4 -4.49556 | CTTTTATTAAAGAAA CATC CCCT GATG AACCAATAATACTAT TERM 3560 2746814 - 2746857 + r 91 -7.4 -5.39755 | opp_overlap 2746817 2746819, overlap 2746816 2746817 GCTATAAGCCAGAGA AAATTTCGCCCTGATGGC CTCAAGTA GCCATCAGGGCGTGACTA TTTTTTATACTTATC TERM 3561 2746816 - 2746855 + r 93 -10 -4.31563 | opp_overlap 2746817 2746819, overlap 2746814 2746817 TATAAGCCAGAGAAA ATTTCGCCCTGATGGC CTCAAGTA GCCATCAGGGCGTGAC TATTTTTTATACTTA TERM 3562 2746817 - 2746854 + r 100 -13.5 -3.17311 | opp_overlap 2746817 2746819, overlap 2746816 2746814 ATAAGCCAGAGAAAA TTTCGCCCTGATGGC CTCAAGTA GCCATCAGGGCGTGA CTATTTTTTATACTT TERM 3563 2746854 - 2746817 - R 100 -12 -4.58076 | opp_overlap 2746816 2746814 2746817, overlap 2746819 ATAAGCCAGAGAAAA TTTCGCCCTGATGGCC TCAAGT AGCCATCAGGGCGTGA CTATTTTTTATACTT TERM 3564 2746852 - 2746819 - R 100 -14.6 -2.59534 | opp_overlap 2746817 2746816 2746814, overlap 2746817 AAGCCAGAGAAAATT TCGCCCTGATGGCC TCAAGT AGCCATCAGGGCGT GACTATTTTTTATAC EFER_2669 2747519 - 2747082 - | hypothetical protein TERM 3565 2747697 - 2747662 - R 86 -6.9 -4.95547 | overlap 2747664 TGCAGAACAACAAAA CACGTGCAGCAAC GGTCTAATTG GATGCTGCACGTA TAACAGAGAGTGCTG TERM 3566 2747695 - 2747664 - R 73 -7.3 -4.08992 | overlap 2747662 CAGAACAACAAAACA CGTGCAGCAAC GGTCTAATTG GATGCTGCACG TATAACAGAGAGTGC TERM 3567 2747705 - 2747748 + r 87 -8.4 -4.57569 | gap 1, opp_overlap 2747705 2747707 2747721, overlap 2747707 TGCACGTATAACAGA GAGTGCTGTGG-ATAAAGATA CAA TATCATTATGCTACAGCACTG TTTTTAACCCAGTCA TERM 3568 2747707 - 2747746 + r 88 -11 -3.90316 | gap 1, opp_overlap 2747707 2747705 2747721, overlap 2747705 CACGTATAACAGAGA GTGCTGTGG-ATAAAGATA CAA TATCATTATGCTACAGCAC TGTTTTTAACCCAGT yahA 2748839 - 2747733 - | cyclic di-GMP phosphodiesterase TERM 3569 2748939 - 2748913 - H 75 -5.2 -4.84262 | overlap 2748916 GAATAATTAACAAAA GACTCGGATTAT TAC ACAATCCAACTC TCTCTTCCTTAGCAT TERM 3570 2749512 - 2749479 - H 86 -3.4 -5.64304 | gap 1 GAATATAAGAAAAAA CTTATTGGAAGATAT GCTGT ATAACTT-CAATAAG ATAATTCTCTGTTGC TERM 3571 2750193 - 2750212 + G 77 -2.8 -5.1101 | gap 1, opp_overlap 2750193 2750194 2750197, overlap 2750209 CATGGAGAGCTGAAA TC-GATGCG TAC CGCACCAGA TTTTTTACGTCGTGG yedL 2749968 - 2750447 + | putative acyltransferase EFER_2672 2750728 - 2751579 + | putative aldo-keto reductase TERM 3572 2752358 - 2752335 - g 80 -5.2 -4.90013 | overlap 2752337 GAAGCCAATGAAAAA CTGGTCACCT TGTT AGGTGAACTG GCCGCAGAGAAAGGG EFER_2673 2751606 - 2752595 + | putative aldo-keto reductase TERM 3573 2752604 - 2752629 + T 82 -10.4 -3.63515 | TCGTTAATATCCACA CGGGTCAGCA GCAAAA TGCGGACCCG TTATTCCGAGTAGCG EFER_2674 2753523 - 2752630 - | putative transcriptional regulator, lysR family TERM 3574 2753993 - 2753982 - H 78 -4.4 -5.08169 | ATACATGTCAAAAAA TTGG TTGA CCAA ACTCGCTATTTATAT TERM 3575 2754095 - 2754081 - H 71 -5 -4.58419 | opp_overlap 2754081 ATAAAATACAACAAA TCAGTC ATA AACTGA TTAATATCGTTGTTT EFER_2675 2754232 - 2754492 + | hypothetical protein tfaQ 2755649 - 2755065 - | putative tail fibre chaperone; Qin prophage EFER_2677 2757430 - 2755649 - | Putative tail fiber protein (fragment) TERM 3576 2756860 - 2756878 + gr 100 -8.8 -4.99947 | CGCGGGATTCTTTTT GCGCGC CAGCTCC GCGCGC TTTTATTTCCTTCAG I 2757893 - 2757330 - | Tail protein I TERM 3577 2757566 - 2757597 + gr 83 -11 -3.53012 | gap 1, opp_overlap 2757586 CAGCCTGCGGTGAAT CCTGCC-ACCACT CCACGAC AGTGGTCGGCAGG TTTACCGCCCCCAGA GpJ 2758803 - 2757883 - | Baseplate assembly protein J (GpJ) W 2759140 - 2758787 - | putative baseplate assembly protein W TERM 3578 2758826 - 2758840 + g 81 -7.1 -4.67552 | TATTTCTCCTGTTCT GACGG GTAAG CCGTC TTCTTTTTTGATCCC TERM 3579 2759174 - 2759161 - R 88 -9.5 -4.36914 | opp_overlap 2759159 TTTTCCGTTACAAAA GCGCC GGAT GGCGC GATGGATTAACCGAA EFER_2681 2760332 - 2759181 - | putative Phage late control gene D protein (GPD) X 2760516 - 2760301 - | Tail protein X EFER_2683 2760961 - 2760491 - | putative Phage-related tail protein TERM 3580 2760894 - 2760908 + gr 73 -7.1 -4.14472 | overlap 2760905 ATCACGCGGGCGGTT CCTGC CGAAC GCAGG TTTTCAGCCTGTTGC EFER_2684 2762868 - 2760958 - | hypothetical protein EFER_2685 2763282 - 2762971 - | hypothetical protein TERM 3581 2763303 - 2763290 - R 100 -9.5 -5.14965 | ACCTCCATTAAAAAA CGGCC CGCA GGCCG TCAGGTAGTTAAAGA EFER_2686 2763835 - 2763329 - | putative major tail tube protein (Protein FII) EFER_2687 2765376 - 2763832 - | putative major tail sheath protein (Protein FI) TERM 3582 2764044 - 2764063 + gr 76 -7.9 -4.11216 | opp_overlap 2764033 TATAGGCATTAATGG TGCCGAT AATGTC ATCGGCA TTTTCGCGATCCAGC TERM 3583 2765338 - 2765325 - GR 100 -8.1 -5.64274 | CCAGCCATAAAAAAA CCTGC CGCA GCAGG TCACATTTTCTGATT V 2765995 - 2765339 - | putative Baseplate assembly protein V (GpV) TERM 3584 2765823 - 2765811 - GR 71 -3.3 -4.82901 | TTTGCGCCAGAAAAA CCCTG ACA CAGCG GCAGCCAGGTCGTGA EFER_2689 2766500 - 2765949 - | hypothetical protein EFER_2690 2767260 - 2766511 - | hypothetical protein TERM 3585 2766645 - 2766659 + gr 71 -8.5 -3.57144 | TATCCACCTCAGCTT CCCGG GTACG CCGGG TTTGCGGATCACGAA TERM 3586 2766835 - 2766850 + gr 89 -11.8 -3.36581 | CCGCAGGGTATGGCG CGGGCG TAGC CGCCCG TTAATTCGCCCTTTC EFER_2691 2767579 - 2767169 - | hypothetical protein EFER_2692 2767854 - 2767525 - | hypothetical protein TERM 3587 2767891 - 2767872 - R 78 -10.6 -3.29144 | TTACCTCCGGTATAA GCGGCTCC CGAC GGTGCCGC CTGAGTAAAAAAAAC TERM 3588 2767921 - 2767906 - R 100 -7.5 -5.86061 | opp_overlap 2767906 CCTGAGTAAAAAAAA CCGCC TGACGC GGCGG TGAATTACTGTTTTT EFER_2693 2770199 - 2767926 - | putative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) of prophage EFER_2694 2771472 - 2769961 - | Putative head-tail preconnector protein from phage origin EFER_2695 2771696 - 2771481 - | hypothetical protein TERM 3589 2771665 - 2771641 - G 100 -15.1 -3.48276 | TTCCCGTCCAGAGAA TCACGATACGC CTG GCGTACCGTGA CCAGCATCTGCTGGA EFER_2696 2773810 - 2771693 - | putative DNA packaging protein of prophage ( terminase large subunit) TERM 3590 2771781 - 2771791 + g 81 -4.6 -5.09225 | ACCGGAGATGAACGA GCGG ATA TCGC TTTTTTCACTCCCCT TERM 3591 2771966 - 2771977 + g 70 -5.8 -4.19817 | GTTGTTCCCTTTACC TGGC TTGC GCCA TTTTCCGTCGCTGCC TERM 3592 2772068 - 2772056 - G 72 -10.5 -3.00786 | opp_overlap 2772055 2772056 GGGAAAATGGATATA CCCGG CCC CCGGG GTTTCACGCTCCAGA TERM 3593 2772056 - 2772068 + g 70 -10.5 -2.74144 | opp_overlap 2772056, overlap 2772055 GGGAAAATGGATATA CCCGG CCC CCGGG GTTTCACGCTCCAGA TERM 3594 2772482 - 2772439 - G 81 -12.6 -3.15427 | gap 1, opp_overlap 2772438 2772436 2772439 AAGAGCCCGGATGAA TCGTCAGTGCCT-CGCCGT TTTCATC ACAGCGCAGGGACTGACGA ATGTTATAGCGATCC TERM 3595 2773740 - 2773757 + g 72 -7.7 -3.96148 | gap 1, opp_overlap 2773740 ACGGCCTCGGCAACA GGCATCCG ACG CGG-TGCC TTTATGATCCCGGCG EFER_2697 2774332 - 2773814 - | conserved hypothetical protein from phage origin TERM 3596 2773892 - 2773903 + g 70 -4.4 -4.58395 | overlap 2773881 AATCTGATCCCGCAG GTCA TCTA TGAC TTTTTGCACCCTGAC EFER_2698 2774696 - 2774460 - | hypothetical protein TERM 3597 2774541 - 2774518 - G 82 -7.4 -4.5528 | CAAAACGAATGAAAA TCTGAACGAC CACG GTCGCACAGA CTAGAATACATGTCC TERM 3598 2774629 - 2774640 + g 74 -2.2 -5.04356 | AGCGCGGTAAAAACC CGGT GTGC ATCG TTTTTGATTATTTCC borD 2774865 - 2775206 + | putative lipoprotein; DLP12 prophage TERM 3599 2775215 - 2775236 + T 100 -13.1 -4.06148 | opp_overlap 2775207 ACAATAATTGCATGA GTTGCCCAT CAAT ATGGGCAAC TTTATCTGCACTGTT rzpD 2775711 - 2775238 - | putative murein endopeptidase; DLP12 prophage ybcS 2776193 - 2775696 - | putative lysozyme; DLP12 prophage essD 2776408 - 2776193 - | putative phage lysis protein S; DLP12 prophage TERM 3600 2776347 - 2776383 + g 72 -8.6 -3.75766 | opp_overlap 2776341 2776344 TGTAAAAACCAGTAG CCAGCACTGCCTGCGG AGGTG CCGTAGGCAATGCCCG TTGTTAACTTATCCA TERM 3601 2776534 - 2776515 - R 100 -6.4 -5.63236 | ATTCAAAAAGAAAAA CGCCAG CGATTATT CTGGCG TAGCTGAAAGCATCA EFER_2703 2777337 - 2776597 - | putative araC-type regulatory protein from bacteriophage origin EFER_2704 2778637 - 2777678 - | Conserved Hypothetical protein from bacteriophage origin blc 2778830 - 2779354 + | Outer membrane lipoprotein blc precursor (LIPOCALIN) from bacteriophage origin TERM 3602 2779408 - 2779389 - T 100 -9.3 -5.31877 | ACTTATTAGAAAAAA CCAGCCT TTGGAG AGGCTGG CTAAATCAGGAAACA ybcQ 2779901 - 2779509 - | putative antitermination protein Q homolog; DLP12 prophage rusA 2780471 - 2780109 - | endonuclease RUS; DLP12 prophage ybcO 2780758 - 2780468 - | conserved hypothetical protein; DLP12 prophage EFER_2709 2781002 - 2780751 - | protein NinE from phage origin ybcN 2781376 - 2780921 - | conserved hypothetical protein; DLP12 prophage TERM 3603 2781441 - 2781416 - R 91 -6.1 -5.5208 | opp_overlap 2781423 GCAGAATACAAAAAA TCGCAGGTGCA TTTC TGCATCTGTGA CGGGAGAAGTGAGTT EFER_2711 2782073 - 2781564 - | hypothetical protein TERM 3604 2782100 - 2782079 - R 84 -6.5 -5.06505 | opp_overlap 2782079 2782080 2782090 2782091, overlap 2782080 AACCAGACATAAAAA CCCCCTCGA TTAT TTGAGGGGA TTATACCTTCAAAGT TERM 3605 2782099 - 2782080 - R 70 -7.8 -3.62276 | opp_overlap 2782080 2782079 2782090 2782091, overlap 2782079 ACCAGACATAAAAAC CCCCTCGA TTAT TTGAGGGG ATTATACCTTCAAAG TERM 3606 2782080 - 2782099 + r 71 -10 -2.64912 | opp_overlap 2782079 2782080, overlap 2782079 2782090 2782091 ACCAGACATAAAAAC CCCCTCGA TTAT TTGAGGGG ATTATACCTTCAAAG EFER_2712 2782344 - 2782123 - | hypothetical protein EFER_2713 2783175 - 2782465 - | hypothetical protein EFER_2714 2783585 - 2783172 - | hypothetical protein EFER_2715 2783812 - 2783582 - | hypothetical protein EFER_2716 2784066 - 2783809 - | hypothetical protein EFER_2717 2784299 - 2784006 - | Ren protein from phage origin EFER_2718 2784997 - 2784296 - | putative replication protein P of bacteriophage EFER_2719 2786013 - 2784994 - | Replication protein O frm phage origin TERM 3607 2785459 - 2785502 + g 100 -11.2 -4.69656 | overlap 2785457 2785456 2785483 TAGTTTGTCTTTTGT GTTTACCTGATTCGGGTAAG TGCC TTTACCTGATTTGGGTAAAC TTTTCTTACCTGATT TERM 3608 2785483 - 2785525 + g 76 -9.4 -3.81137 | overlap 2785459 2785508 2785520 2785522 ATTCGGGTAAGTGCC TTTACCTGATTTGGGTAA ACTTTTC TTACCTGATTCAGGTAAA TTTACCTCTTTCAGG TERM 3609 2785522 - 2785549 + g 79 -3.7 -5.11063 | gap 1, opp_overlap 2785526, overlap 2785508 2785483 2785520 2785526 CTTACCTGATTCAGG TAAA-TTTACCT CTTTC AGGTAAACTTTA TTTTTCTTACCTGAT EFER_2720 2786501 - 2786010 - | Regulatory protein CII (modular protein) from bacteriophage origin; putative coiled-coil cro 2786813 - 2786580 - | represror Cro EFER_2722 2786882 - 2787610 + | Regulatory protein CI from bacteriophage origin EFER_2723 2787740 - 2788879 + | putative peptidase m, neutral zinc metallopeptidases, zinc-binding site; protein EFER_2724 2788876 - 2789388 + | hypothetical protein TERM 3610 2789409 - 2789391 - f 78 -5.8 -4.86731 | opp_overlap 2789391 2789394, overlap 2789393 TTCTTTGAAATAAAA CGTCCCGG CCA CCGTGCCG GGTTTTCTTTTGCCT TERM 3611 2789394 - 2789411 + F 100 -9.8 -5.10933 | opp_overlap 2789391 2789393, overlap 2789391 TTTGAAATAAAACGT CCCGGC CACCGT GCCGGG TTTTCTTTTGCCTCC EFER_2725 2789663 - 2790073 + | putative prophage Kil protein (modular protein) EFER_2726 2790149 - 2790445 + | putative host-nuclease inhibitor protein Gam of bacteriophage EFER_2727 2790451 - 2791236 + | Recombination protein bet from phage origin EFER_2728 2791233 - 2791913 + | exonuclease from phage origin TERM 3612 2791976 - 2791994 + F 88 -9.5 -4.27117 | opp_overlap 2791972 2791976 TCCGTTACAAAGCGA GGCTGGG TATTT CCCGGCC TTTCTGTTATCAGAA TERM 3613 2792191 - 2792205 + G 80 -5.6 -4.96848 | opp_overlap 2792192, overlap 2792192 CAGCCAACGAAAAAA ACCGAC TAT GTCGGC TTTTTATCTCACAGG TERM 3614 2792192 - 2792204 + G 73 -9.1 -3.57627 | opp_overlap 2792192, overlap 2792191 AGCCAACGAAAAAAA CCGAC TAT GTCGG CTTTTTATCTCACAG TERM 3615 2792204 - 2792192 - g 100 -9.1 -5.64006 | opp_overlap 2792192 2792191 AGCCAACGAAAAAAA CCGAC TAT GTCGG CTTTTTATCTCACAG EFER_2729 2792064 - 2792621 + | putative DNA N-6-adenine-methyltransferase from phage origin TERM 3616 2792783 - 2792764 - g 86 -4.2 -5.37593 | overlap 2792765 TCTGAAATCAAAAAA GCCAGACA GCAG TGTCCGGA TAAAAACGTCGATGA TERM 3617 2792800 - 2792790 - g 71 -3.2 -4.82901 | GTGTCCGGATAAAAA CGTC GAT GACA TTTGCCGTAGCGTAC EFER_2730 2792599 - 2792913 + | conserved hypothetical protein from bacteriophage origin; putative coiled coil TERM 3618 2792936 - 2792950 + F 100 -7.8 -5.64873 | AAACAAAATCATCAT GGAGCT ACA GGCTCC TTTTTTATTATTCGC EFER_2731 2793012 - 2793230 + | conserved hypothetical protein from bacteriophage origin; putative Zn-finger, prokaryotic DksA/TraR C4 type; putative DnaK suppressor protein EFER_2732 2793278 - 2793556 + | conserved hypothetical protein from phage origin TERM 3619 2793653 - 2793638 - gf 74 -6.2 -4.4634 | AAGTGGAAGAAGAAA TCTTCA CTCG TGAAGA GGCTGCGTCGTATCT xis 2793553 - 2793972 + | Excisionase from phage origin TERM 3620 2794016 - 2793998 - gT 88 -5.2 -5.21709 | overlap 2794000 GTGGAGAGTAAAAAA TCTCGGGG AAT CACCGAAA AAGCTATTCAAGGAA TERM 3621 2794916 - 2794888 - gT 70 -8.1 -3.5936 | overlap 2794893 TCGAAATGGTTCAAA GATACGCCCACCT TTC AGCTGGGCATCTC ACCGAGCACGCGAGC int 2793849 - 2795009 + | Integrase from phage origin TERM 3622 2795153 - 2795207 + T 100 -8.4 -4.99043 | opp_overlap 2795141 2795153 CAAGGTTAAAACTAA CCGGGCGATGCGTCAATGGCCTTGTG AAT CAAATGGCTACTTTTGCATCACCCGG TTTTATTTATGCACG TERM 3623 2795207 - 2795153 - T 73 -8.4 -3.69437 | opp_overlap 2795153, overlap 2795141 CAAGGTTAAAACTAA CCGGGCGATGCGTCAATGGCCTTGTG AAT CAAATGGCTACTTTTGCATCACCCGG TTTTATTTATGCACG proA 2796467 - 2795214 - | gamma-glutamylphosphate reductase proB 2797582 - 2796479 - | gamma-glutamate kinase phoE 2797870 - 2798925 + | outer membrane phosphoporin protein E TERM 3624 2798958 - 2798930 - T 79 -11.7 -2.53382 | opp_overlap 2798932 2798933 ATCAGTTTTAATGGA GATTGCCGGATGC GGC GCATCCGGCACTT TTCACTCACGCGGTT TERM 3625 2798932 - 2798956 + T 100 -14.3 -4.18018 | opp_overlap 2798930, overlap 2798933 CAGTTTTAATGGAGA TTGCCGGATGC GGC GCATCCGGCAC TTTTCACTCACGCGG TERM 3626 2798933 - 2798955 + T 100 -17.8 -3.10597 | opp_overlap 2798930, overlap 2798932 AGTTTTAATGGAGAT TGCCGGATGC GGC GCATCCGGCA CTTTTCACTCACGCG crl 2799365 - 2798964 - | DNA-binding transcriptional regulator TERM 3627 2799392 - 2799410 + r 75 -9 -3.61889 | GTTGTGATGCACCTG TTTTACCA AAC TGGTAAAA TTTAGCAAATTTTTA frsA 2800667 - 2799423 - | hydrolase, binds to enzyme IIA(Glc) TERM 3628 2800141 - 2800120 - G 74 -2.1 -5.1287 | overlap 2800121 2800122 GGCATATGCAAAAAA CCGGTGATG GGCG CACCGCCTG GTACGGTAAACTCCA TERM 3629 2800756 - 2800726 - R 81 -7.4 -4.65895 | overlap 2800729 GCCGTGAGTTAAAAA GAACAACGCCCGGC AGT GCCAGGCGTTGAAA AGATTAGCGGCCTGA TERM 3630 2800753 - 2800729 - R 100 -17.9 -4.44608 | overlap 2800726 GTGAGTTAAAAAGAA CAACGCCCGGC AGT GCCAGGCGTTG AAAAGATTAGCGGCC gpt 2801218 - 2800760 - | guanine-hypoxanthine phosphoribosyltransferase TERM 3631 2801498 - 2801521 + G 90 -9 -4.57837 | gap 1, opp_overlap 2801500 CTGAACTGTCTCAAT TATCTCCACAG CCG CTGTGG-GATA TTTTTGCCAAAATCT pepD 2801479 - 2802936 + | aminoacyl-histidine dipeptidase (peptidase D) TERM 3632 2802969 - 2802946 - f 100 -12.4 -3.62762 | opp_overlap 2802944 2802940 2802947, overlap 2802940 2802947 AAGTAATAACGATAA CGTCCACGCC TGCG GGCGTGGACT ACTGTTTGAAGCCAA TERM 3633 2802968 - 2802947 - f 100 -15.9 -2.76573 | opp_overlap 2802947 2802944 2802940, overlap 2802946 2802940 AGTAATAACGATAAC GTCCACGCC TGCG GGCGTGGAC TACTGTTTGAAGCCA TERM 3634 2802947 - 2802968 + F 100 -15.9 -2.84325 | opp_overlap 2802946 2802940 2802947, overlap 2802944 2802940 AGTAATAACGATAAC GTCCACGCC TGCG GGCGTGGAC TACTGTTTGAAGCCA EFER_2742 2802963 - 2803226 + | hypothetical protein EFER_2743 2803813 - 2803235 - | hypothetical protein TERM 3635 2803762 - 2803773 + g 70 -4.4 -4.57341 | opp_overlap 2803762 GACCGATAAACATGA CGAA TCCT TTCG TTTTTCCCGCCGCTT TERM 3636 2803774 - 2803812 + g 81 -12.5 -3.21912 | overlap 2803806 TGACGAATCCTTTCG TTTTTCCCGCCGCTTTC ATATA GAAAACGGCGGGAGACA TTCCTCAATTACACA prfH 2804321 - 2803821 - | putative peptide chain release factor EFER_2745 2805571 - 2804432 - | hypothetical protein TERM 3637 2804684 - 2804709 + g 82 -3.1 -5.26875 | overlap 2804685 CCCCCATTTACGCCC TGCCCCATGCG CCAG CGAGTGGAGCG TTTTTTCGTTCGCAA yafP 2806341 - 2805889 - | putative acyltransferase with acyl-CoA N-acyltransferase domain yafO 2806749 - 2806351 - | putative toxin of the YafO-YafN toxin-antitoxin system yafN 2807045 - 2806752 - | putative antitoxin of the YafO-YafN toxin-antitoxin system TERM 3638 2806855 - 2806866 + g 76 -3.6 -4.9934 | CTCGGACGGAAACGC GCCT TTAT GGGC TTTTTCTCCTCTTGT dinB 2808152 - 2807097 - | DNA polymerase IV mbhA 2809113 - 2808223 - | flagellar system protein TERM 3639 2809491 - 2809519 + Gr 78 -5.3 -4.87626 | TCATGTTTGTGCTGG CGGT-GGTGCCGG GGATG CCG-CACCTGCCG TTTTTGCTGTTCAGC TERM 3640 2809582 - 2809571 - gR 70 -7.2 -3.78775 | TGGCGGATGAGCAAA CGCC CGCA GGCG GCGGAGGCGGAAGAG fhiA 2808563 - 2810692 + | flagellar system protein TERM 3641 2810714 - 2810753 + Tr 80 -11.4 -2.70946 | opp_overlap 2810717 2810736, overlap 2810713 2810712 TTAAGGGGCGCTGCA CAACTGCCGGATGTGGCA TAAA TGCCTTATCCGGCAGTCA ATATTTATCACAACA TERM 3642 2810750 - 2810717 - TR 100 -15.3 -3.28791 | opp_overlap 2810714 2810713 2810712, overlap 2810736 AGGGGCGCTGCACAA CTGCCGGATGTGGCA TAAA TGCCTTATCCGGCAG TCAATATTTATCACA recD 2812597 - 2810777 - | exonuclease V (RecBCD complex), alpha chain recB 2816154 - 2812594 - | exonuclease V (RecBCD complex), beta subunit TERM 3643 2814954 - 2814922 - G 81 -12.7 -3.25015 | opp_overlap 2814915 2814922 2814923, overlap 2814915 GCCAATCAGGAGCAA CGCCGTTTCCGGC TGTTGAT GCCAGATACGGCG AAAAATACGGTATTG TERM 3644 2815292 - 2815271 - G 76 -3.7 -5.02074 | gap 1 CGATCTTCTAAAAAA CGCTGAGAGA ACT TTTC-CAGCG ATTCCGGCAGTTGAT TERM 3645 2815300 - 2815312 + g 70 -4.1 -4.70887 | TTCCAGCGATTCCGG CAGTT GAT AGCTG TTTGTTTCTTCCTGC TERM 3646 2816013 - 2815999 - G 85 -11.4 -3.58269 | CAATGGACGGGGAAA GGCGGA TGC TCCGCC TAATCCAAGTAACAG TERM 3647 2816114 - 2816088 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGGTCTAATGTCT ptr 2819026 - 2816138 - | protease III TERM 3648 2816321 - 2816332 + g 70 -3.6 -4.60797 | opp_overlap 2816308, overlap 2816320 ATCGGCAAGTTTTTG CGGC GTCA GCTG TTTTATCTGTGCCAC TERM 3649 2816875 - 2816896 + g 70 -10.1 -3.13432 | overlap 2816864 2816863 2816892 GTTTTTGCACGTCAC GCGCGAGTG TTTT CGCTTGCGC TTCGCTCATATTGCC recC 2822571 - 2819203 - | exonuclease V (RecBCD complex), gamma chain TERM 3650 2819355 - 2819373 + g 82 -3 -5.27206 | TGCCTTCATACGCTT GCAGGAAC TTA GTTCGCGC TTTTTGTTGTGTATC EFER_2756 2822907 - 2822587 - | Prepilin peptidase dependent protein C precursor TERM 3651 2822816 - 2822789 - G 70 -4.9 -4.46212 | TTTTTGAGCACAAAA CTGTTCATCAG TGCTCG CTGATAACCAG ACAATGCCGTCACAA EFER_2757 2823296 - 2822892 - | conserved hypothetical protein; putative exported protein ppdB 2824096 - 2823293 - | prepilin peptidase-dependent protein B ppdA 2824317 - 2823847 - | prepilin peptidase dependent protein A precursor TERM 3652 2823984 - 2824009 + g 76 -7.5 -4.2074 | gap 1, opp_overlap 2823982 2823983 2823984 GCAGGCCATAAAACG CCAGTGCCGGAG TGG CTTCGGC-CAGG TTTATCTCTTCCCAA TERM 3653 2824479 - 2824460 - R 100 -10.7 -5.71712 | opp_overlap 2824460 2824459 CGGGAGAGAAAAAAA CCGACGC ACAATG GCGTCGG CTTTGGCAGGATTTA TERM 3654 2824460 - 2824479 + r 77 -10.7 -2.73635 | opp_overlap 2824460, overlap 2824459 CGGGAGAGAAAAAAA CCGACGC ACAATG GCGTCGG CTTTGGCAGGATTTA thyA 2825286 - 2824492 - | thymidylate synthetase TERM 3655 2824847 - 2824865 + g 70 -5.2 -4.42788 | opp_overlap 2824844 2824847, overlap 2824844 AACTGGAAGAATGCA TGGCATGG AGC CAGTGCCA TTTTATCCAGTTCGC lgt 2826168 - 2825293 - | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase TERM 3656 2826271 - 2826287 + r 93 -12.3 -3.12668 | opp_overlap 2826268 2826267 2826264 2826271 TAATAGCACAAGGGA TCGGGCA TAT TGCCCGA TTAGCTGTAAAAGTA TERM 3657 2826287 - 2826271 - R 88 -12.3 -2.63234 | opp_overlap 2826271, overlap 2826268 2826267 2826264 TAATAGCACAAGGGA TCGGGCA TAT TGCCCGA TTAGCTGTAAAAGTA TERM 3658 2826341 - 2826325 - R 89 -12.3 -2.87931 | GTTACGTTTTACAGA CGGGCTT TTA AAGCCCG CCACGTATCAGTCCG ptsP 2828578 - 2826332 - | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I) ; GAF domain containing protein TERM 3659 2828499 - 2828545 + g 81 -7.3 -4.6856 | gap 2, opp_overlap 2828509, overlap 2828495 2828500 GCAAGACAGATGTCG GTGACCAGAATGTTCAGCGCCTC ATT GAGGCGCGGAGCA--CTGGCAAC TTTTTCGACTATTTC TERM 3660 2828537 - 2828509 - G 89 -13.1 -3.40403 | opp_overlap 2828495 2828500 2828499 TGTCGGTGACCAGAA TGTTCAGCGCCTC ATT GAGGCGCGGAGCA CTGGCAACTTTTTCG nudH 2829121 - 2828591 - | nucleotide hydrolase mutH 2829795 - 2830499 + | methyl-directed mismatch repair protein ygdQ 2830563 - 2831276 + | conserved hypothetical protein; putative inner membrane protein TERM 3661 2831305 - 2831286 - f 93 -13.6 -2.80816 | opp_overlap 2831293 CTCTGACGCACCACA CGCTCTCC TGCG GGAGAGCG TCCTCCCCTCTCCTC ygdR 2831409 - 2831627 + | hypothetical protein TERM 3662 2832562 - 2832550 - g 72 -4.7 -4.61747 | opp_overlap 2832550 CGAACAAGCACAAAA GGCGG TGG CGGCC TATGTCGATATAGCC tas 2831735 - 2832775 + | putative oxidoreductase, NADP(H)-dependent aldo-keto reductase TERM 3663 2832782 - 2832804 + F 100 -12.7 -3.49789 | overlap 2832780 2832783 GCACCTTAACGTCCT TGCCTGGCG TTCTT CGCCAGGCG TCTCTTTTCTCGATT TERM 3664 2832783 - 2832803 + F 95 -14 -2.68789 | overlap 2832782 2832780 CACCTTAACGTCCTT GCCTGGCG TTCTT CGCCAGGC GTCTCTTTTCTCGAT TERM 3665 2833286 - 2833275 - g 70 -4.4 -4.45544 | CTGGAGCAAGCAAAA CTCA CTGC TGAG AAAGACAATATCGCA TERM 3666 2833653 - 2833637 - g 70 -10.1 -3.15544 | opp_overlap 2833640 2833650 CGCCAGTGCTATCAA CCAACCG CTA CGGCTGG TCTACAAAGCCAGTA TERM 3667 2833888 - 2833872 - g 91 -9.4 -4.59773 | GTTGACTTTGAAAAA GCTGCG GCGCA CGCAGC GAAAGAGGCACTGGC TERM 3668 2834314 - 2834301 - g 74 -2.4 -5.08824 | opp_overlap 2834301 GCGGTACTGAAAAAA GAGA ACGCTA TCTC TATTTTTAATGACAG TERM 3669 2834512 - 2834550 + G 95 -15.4 -3.12351 | opp_overlap 2834520 2834525, overlap 2834520 2834525 GGAAGCTCCATCTGG CAGGGAAAGAGAACGTCA GCT TGCCGTTCTCTTACTCTG TTAAATATCCCAAAA TERM 3670 2834542 - 2834520 - g 81 -10.6 -3.6502 | opp_overlap 2834520 2834512 2834525, overlap 2834525 CATCTGGCAGGGAAA GAGAACGTCA GCT TGCCGTTCTC TTACTCTGTTAAATA TERM 3671 2834520 - 2834542 + G 76 -10.6 -3.38207 | opp_overlap 2834520 2834525, overlap 2834512 2834525 CATCTGGCAGGGAAA GAGAACGTCA GCT TGCCGTTCTC TTACTCTGTTAAATA EFER_2768 2832918 - 2834588 + | hypothetical protein; putative exported protein ygeD 2835820 - 2834627 - | conserved hypothetical protein; putative inner membrane protein TERM 3672 2835157 - 2835144 - G 75 -6.7 -4.30719 | GCCCCCCAGAACAAA CTGGT GCCC ACCAG CGAGAAGCGAGTTTC aas 2837972 - 2835813 - | fused 2-acylglycerophospho-ethanolamine acyl transferase ; acyl-acyl carrier protein synthetase TERM 3673 2838074 - 2838091 + r 93 -12.7 -3.14132 | opp_overlap 2838074 TGAGGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3674 2838091 - 2838074 - R 100 -12.7 -5.78622 | opp_overlap 2838074 TGAGGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 3675 2838294 - 2838277 - R 100 -12.7 -5.97575 | opp_overlap 2838277 AATGCATAAAAAAAA CCTGCGC ATCT GCGCAGG TTGGTGTAATTCAAG TERM 3676 2838277 - 2838294 + r 95 -12.7 -3.32647 | opp_overlap 2838277 AATGCATAAAAAAAA CCTGCGC ATCT GCGCAGG TTGGTGTAATTCAAG EFER_2771 2838554 - 2838255 - | hypothetical protein TERM 3677 2839509 - 2839494 - g 75 -4.6 -4.82901 | overlap 2839496 GCGCTGGCAGAAAAA CGTCCG CTCC CGGAAG TCACGCACGTTTTCA galR 2838567 - 2839595 + | DNA-binding transcriptional repressor lysA 2840872 - 2839610 - | diaminopimelate decarboxylase, PLP-binding TERM 3678 2841570 - 2841607 + G 78 -7.7 -4.41348 | gap 1, opp_overlap 2841568, overlap 2841573 GAGAACTATATCAGT CTCTCCCGC-ACTGACAG TTA CCGTCAGTTGCTGGATAG TTTATTTACAGAGCA lysR 2840982 - 2841917 + | DNA-binding transcriptional dual regulator yqeF 2843103 - 2841922 - | Acetyl-CoA acetyltransferase TERM 3679 2844419 - 2844451 + G 80 -5.5 -5.02323 | opp_overlap 2844428, overlap 2844422 2844423 ATGCAATTTCGATGA TCTATGCAATCAGCG GAC CACTGATTGCGATGA TTTTGTTTATCATGC yqeG 2843347 - 2844576 + | putative transporter TERM 3680 2844584 - 2844620 + F 100 -10.9 -4.64334 | opp_overlap 2844588, overlap 2844586 2844588 TCGGTTAACATAACA AAAACGGTTCAGACGAA ACC TACGTCTGAACCGTATC TTTTATTCGCGAATT TERM 3681 2844586 - 2844618 + F 100 -13.5 -3.93367 | opp_overlap 2844588, overlap 2844584 2844588 GGTTAACATAACAAA AACGGTTCAGACGAA ACC TACGTCTGAACCGTA TCTTTTATTCGCGAA TERM 3682 2844616 - 2844588 - f 100 -16.1 -5.29716 | opp_overlap 2844586 2844584 2844588 TTAACATAACAAAAA CGGTTCAGACGAA ACC TACGTCTGAACCG TATCTTTTATTCGCG TERM 3683 2844588 - 2844616 + F 100 -16.1 -3.55261 | opp_overlap 2844588, overlap 2844586 2844584 TTAACATAACAAAAA CGGTTCAGACGAA ACC TACGTCTGAACCG TATCTTTTATTCGCG TERM 3684 2844939 - 2844927 - f 73 -9.1 -3.45396 | opp_overlap 2844926 2844927, overlap 2844925 AAGAGTAATAGAATA CGGCT ATT AGCCG ATTTTGAGAATTTTA TERM 3685 2845743 - 2845722 - g 82 -2.1 -5.36441 | overlap 2845726 TTCCGACAGAAAAAA GGAAGGCCG AACT CGTCCTCGC CTGAGATGACTGTTA yqeH 2845019 - 2845747 + | conserved hypothetical protein; putative bipartite regulator domain TERM 3686 2845772 - 2845796 + F 100 -16.5 -3.34222 | TACGTTCAATGCTTA CCCGCTTTGGT TAC GCCAAAGCGGG TTGTGCACTCGTCAT TERM 3687 2845848 - 2845879 + F 77 -10.2 -3.10905 | opp_overlap 2845870 GATTGCGTTCGTTCA CCCCAGTCACTTAC TTTA GTAAGTGACTGGAA TTCACTCGCTTATCG TERM 3688 2845998 - 2845963 - f 81 -11.4 -2.80492 | gap 1, overlap 2845960 2845965 TACCATTATTAATTA TACTCGTCATACCT-CA AGT TGCATGTATGACGAGTA CAGGTAAAAAAACAA TERM 3689 2845996 - 2845965 - f 71 -9.6 -2.94695 | gap 1, overlap 2845963 2845960 CCATTATTAATTATA CTCGTCATACCT-CA AGT TGCATGTATGACGAG TACAGGTAAAAAAAC EFER_2778 2845989 - 2846912 + | putative regulatory protein TERM 3690 2847103 - 2847091 - g 77 -6.3 -4.62783 | TATTCATTGGAAAAA CAACA GGG TGTTG TTGCAGTCAGTGGTA EFER_2779 2846905 - 2847387 + | conserved hypothetical protein; putative exported protein TERM 3691 2847570 - 2847557 - f 84 -3.9 -5.46629 | overlap 2847547 AAGAGTGTAAAAAAA TTACA GTAG TGTAA GAAAAAGCGCATTCT TERM 3692 2849151 - 2849135 - gf 73 -5.7 -4.42788 | overlap 2849104 2849102 2849101 2849136 CGTAAGCGGAGAAAA CCGAGCG TTA CGCCCGT TAGGCCAGATTTTGC TERM 3693 2849150 - 2849136 - gf 74 -9.2 -3.25191 | overlap 2849104 2849102 2849101 2849135 GTAAGCGGAGAAAAC CGAGCG TTA CGCCCG TTAGGCCAGATTTTG TERM 3694 2849325 - 2849306 - gf 70 -3.5 -4.63218 | opp_overlap 2849306 GTTGGCGGAACAAAA CGGAGTC GGTTGG GAATCCG TTGATGCGTGGCAGA nfrB 2847666 - 2849918 + | bacteriophage N4 receptor, inner membrane subunit TERM 3695 2850721 - 2850739 + GF 86 -8.8 -4.28994 | opp_overlap 2850733 CGGCTGGCGCACTAT CTGGCAGA AAA TCAGCCAG TTTTCCTGAATGCTG TERM 3696 2850799 - 2850767 - gf 82 -7.8 -4.55023 | gap 1, overlap 2850733 CTGAACAGGAGAAAA GCTGGCTGTATTTGC TTAC GCAC-TACAGCCAAC AACCGGTACAGGCGC TERM 3697 2852472 - 2852484 + GF 70 -7.7 -3.73775 | CACAATGTTACGTGC CAGTG CGT CACTG TTTAATGACGGTAAA nfrA 2849887 - 2852877 + | bacteriophage N4 receptor, subunit, outer membrane protein ybcH 2852877 - 2853770 + | conserved hypothetical protein; putative exported protein TERM 3698 2854605 - 2854592 - g 70 -5.2 -4.30978 | opp_overlap 2854593, overlap 2854593 CTGAACGCATTAAAA GCGG TCGTTC CCGC ACAACCGTTAGATTT codB 2854043 - 2855302 + | cytosine transporter TERM 3699 2855749 - 2855769 + G 74 -6.2 -4.50976 | gap 1, opp_overlap 2855766, overlap 2855752 TTGATCTGCAAATCG TCGCCTTCC CGCA GGAAGG-GA TTTTGTCGTATCCCA codA 2855292 - 2856575 + | cytosine deaminase EFER_2786 2858532 - 2856796 - | hypothetical protein TERM 3700 2858331 - 2858319 - G 76 -7.7 -4.25104 | opp_overlap 2858318 TCGCTTTGAGTAAAA CAGGA GCC TCCTG GATTTCCCGCCTACG EFER_2788 2859818 - 2858916 - | hypothetical protein EFER_2787 2858775 - 2859131 + | hypothetical protein TERM 3701 2859648 - 2859663 + gT 72 -5.4 -4.52589 | TTTATAGAGATTTTC GAGAGC CTCT GCTTTC TTTTCTATGCGGAAC EFER_2789 2860121 - 2859933 - | putative protein perC (Protein bfpW) (fragment) EFER_2790 2860460 - 2860236 - | hypothetical protein insE 2860535 - 2860843 + | IS3 element protein InsE TERM 3702 2861117 - 2861090 - g 75 -4.7 -4.74504 | ACTTTAACGTAAAAA CCGTGGCGGCA AGCCTG CGCCGTCAGGG GCTGAGGGCAAAAGC insF 2860840 - 2861706 + | IS3 element protein InsF EFER_2793 2861798 - 2862229 + | hypothetical protein EFER_2794 2862316 - 2862525 + | putative regulatory protein EFER_2795 2862607 - 2863674 + | hypothetical protein TERM 3703 2863764 - 2863736 - f 100 -21.9 -4.08767 | opp_overlap 2863732 CTTATCTGCGGAAAA CTCATGACGGCCA TCG TGGCCGTCATGAG CACATAATTAATACA EFER_2796 2863953 - 2864858 + | hypothetical protein EFER_2797 2864855 - 2865043 + | hypothetical protein EFER_2798 2865771 - 2865229 - | hypothetical protein EFER_2799 2866528 - 2865689 - | transposase ORF B, IS911 EFER_2801 2866973 - 2867443 + | putative marR-family regulatory protein TERM 3704 2867673 - 2867655 - T 100 -9.6 -4.93898 | ACATCAGCAGAAAAA TCGACCAG AAC CTGATCGA CATCTGAGCCACATA EFER_2803 2868138 - 2867785 - | Arsenical resistance operon repressor TERM 3705 2868191 - 2868212 + H 100 -10.3 -4.56887 | opp_overlap 2868187 2868191 2868195 AATAAAATCAATTTA CATATTCGT AAAA ACGAATATG TTTTATGCGTTTTTA TERM 3706 2868212 - 2868191 - H 74 -10.3 -2.67792 | opp_overlap 2868191, overlap 2868187 2868195 AATAAAATCAATTTA CATATTCGT AAAA ACGAATATG TTTTATGCGTTTTTA TERM 3707 2868849 - 2868835 - g 72 -5.6 -4.50058 | overlap 2868837 GATGCAGAATCAAAA CTGACC AAT GGTCGG CAGTCAAGATTATCG TERM 3708 2869616 - 2869584 - g 71 -10.7 -2.85078 | opp_overlap 2869578 2869589, overlap 2869583 TATAGCCGAGCAAAT GCTATTGCCTGTTTT AGC AAAAGAGGCATTAGC TAGTAGAGATGCAGG EFER_2804 2868232 - 2870280 + | hypothetical protein TERM 3709 2871116 - 2871099 - g 76 -3.5 -4.91357 | AAAGATACAATAAAA TTCATTA CTGA CAATGAA TTCGAAAGAATGCCA EFER_2805 2870259 - 2872043 + | putative helicase int 2873269 - 2872100 - | Integrase TERM 3710 2873513 - 2873542 + r 74 -10.1 -3.14931 | gap 1, overlap 2873516 CTACGCCCGCTTTGA GATGCGTAAGGCAT TAT AAGCCTTACGC-TC TTGCTGGCAAGTGGC TERM 3711 2873516 - 2873540 + r 95 -12.9 -3.1372 | overlap 2873513 CGCCCGCTTTGAGAT GCGTAAGGCAT TAT AAGCCTTACGC TCTTGCTGGCAAGTG ygeR 2874344 - 2873586 - | Tetratricopeptide repeat transcriptional regulator TERM 3712 2874049 - 2874067 + g 75 -6.7 -4.42667 | overlap 2874050 2874064 TTGCTGGTCGATTTT TTGCCAG ATTTA CTGGCAG TTTTGCTGCTTTTCG EFER_2808 2875159 - 2874428 - | putative aldolase class II TERM 3713 2874881 - 2874861 - G 74 -11.1 -3.15078 | opp_overlap 2874873, overlap 2874859 2874873 TAGACCGGATGAAGA TGCAGCACG ACA CGTGCTGCT GGCAGACGTTGATGA EFER_2809 2875994 - 2875164 - | putative bacterial extracellular solute-binding protein, family 3 TERM 3714 2875582 - 2875598 + g 93 -2.2 -5.65513 | overlap 2875574 GAACCAATTTTGTGT CCGCAA AAGTC TTCCGG TTTTTTTGGTTGATA EFER_2810 2876890 - 2876018 - | putative dioxygenase EFER_2811 2878434 - 2876914 - | putative Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine TERM 3715 2876981 - 2877006 + g 70 -4 -4.65895 | gap 1, overlap 2876981 TCACGCATTGCTTGC GG-CGTGTCGT CACAC ACCACACGTCC TTTTTCCATAAAGAC EFER_2812 2878811 - 2879731 + | putative regulatory protein, LysR:LysR substrate-binding domain (fragment) TERM 3716 2880315 - 2880301 - g 72 -5 -4.63932 | overlap 2880303 GATTGCCCAACAAAA TAGTGA TCT TCACCA GATACACTCTGCCCA EFER_2813 2879786 - 2881114 + | putative pyridine nucleotide-disulphide oxidoreductase TERM 3717 2881347 - 2881331 - g 80 -5.1 -4.92239 | overlap 2881333 TGAAAAATGTAAAAA TGCTGCT GGA AGAAGCA GGAAGTGATCTTTCA EFER_2814 2881129 - 2881563 + | putative endoribonuclease TERM 3718 2881583 - 2881601 + GF 77 -10.2 -3.12668 | CTCGATTACGGCTTT ATGCCCGG AAT CCGGGCAA TTAGGTATAGCAATC EFER_2815 2881560 - 2882234 + | hypothetical protein TERM 3719 2883050 - 2883034 - gf 72 -9.3 -3.0792 | CAAGATGTCACCGAA GCCCTGG CGG CCTGGGC CGAAAGCCAGTTACT TERM 3720 2883128 - 2883155 + GF 71 -7 -4.07687 | AACTTAGCCATTACC CTGGTTTGCTGA GCGA TCCGCAAAGCAG TTTTGCCAGAGCACT EFER_2816 2882065 - 2883402 + | putative peptidic bond hydrolase TERM 3721 2883402 - 2883384 - f 75 -3.2 -5.18726 | opp_overlap 2883388, overlap 2883388 TCTGGATAATAAAAA TTATTTTG ATA CAAATTAA ATGATACGTGCGAAC TERM 3722 2884209 - 2884199 - g 72 -6.8 -4.25283 | overlap 2884204 AGCGTGCGACGAAAA CACC ATC GGTG TGGTGCCGACCTTTG gadA 2883597 - 2884997 + | glutamate decarboxylase A, PLP-dependent TERM 3723 2885020 - 2885061 + F 100 -9.7 -5.10933 | gap 1, opp_overlap 2885024 2885027, overlap 2885022 2885024 AATTAATTTCCTGAA AGCAG-AATGTTCAGATTGG TAA TCAATCTGAACATTCCTGTA TTTTATTTTCAGTAA TERM 3724 2885022 - 2885059 + F 100 -14.5 -4.17301 | gap 1, opp_overlap 2885024 2885027, overlap 2885020 2885024 TTAATTTCCTGAAAG CAG-AATGTTCAGATTGG TAA TCAATCTGAACATTCCTG TATTTTATTTTCAGT TERM 3725 2885024 - 2885056 + F 100 -17.3 -2.78124 | opp_overlap 2885024 2885027, overlap 2885022 2885020 AATTTCCTGAAAGCA GAATGTTCAGATTGG TAA TCAATCTGAACATTC CTGTATTTTATTTTC TERM 3726 2885056 - 2885024 - f 100 -16.6 -2.90992 | opp_overlap 2885024 2885022 2885020, overlap 2885027 AATTTCCTGAAAGCA GAATGTTCAGATTG GTAAT CAATCTGAACATTC CTGTATTTTATTTTC TERM 3727 2885053 - 2885027 - f 100 -12.5 -3.60151 | opp_overlap 2885024 2885022 2885020, overlap 2885024 TTCCTGAAAGCAGAA TGTTCAGATTG GTAAT CAATCTGAACA TTCCTGTATTTTATT ybaS 2885195 - 2886142 + | amidase, possibly glutaminase TERM 3728 2886236 - 2886224 - f 77 -4.7 -5.055 | overlap 2886227 TTAATGTTCAAAAAA CGAGC GCG GCGCG GATATAACACCATTC TERM 3729 2886633 - 2886617 - g 75 -7.3 -4.4009 | CGGTACGCCAGAAAA CCTGCAT TTA ATGCAAG CGGCCTTTATCAAAC yagT 2886267 - 2886881 + | putative xanthine dehydrogenase, iron-sulfur binding subunit TERM 3730 2887325 - 2887312 - g 77 -5.9 -4.62336 | overlap 2887314 ACTGCATGGCAAAAA CCGCC AACT GGCAG TGGTCGGCACCAGCG yagS 2886878 - 2887834 + | putative xanthine dehydrogenase yagS, FAD binding subunit TERM 3731 2888883 - 2888901 + G 77 -11.6 -3.20382 | overlap 2888884 CAATGCCATGCGTGC CCCCGGCG AAA CGCCGGGA TTGATGGCTCTGGAG TERM 3732 2888884 - 2888900 + G 89 -15.1 -2.52015 | overlap 2888883 AATGCCATGCGTGCC CCCGGCG AAA CGCCGGG ATTGATGGCTCTGGA yagR 2887831 - 2890029 + | putative xanthine dehydrogenase, molybdenum binding subunit TERM 3733 2890257 - 2890282 + G 73 -11.8 -2.57564 | overlap 2890256 CTGCGGCTTTGTCTC CGGCGGCTGC GTGGAA GCGGCTGCCG CTTATGAAGCACTGG TERM 3734 2890558 - 2890576 + G 75 -11.6 -3.12324 | overlap 2890555 ATCGCAATAGGTTAT CGCCCCGC TAC GCGGGTCG TCATTTTCGGTCATT TERM 3735 2890762 - 2890735 - g 83 -13.5 -3.12668 | GACCTGGATATTGAA CAGCCAGTGCT GGAGGT AGCACTGGCCG CAAAGCCTTTCTATA yagQ 2890039 - 2890974 + | hypothetical protein EFER_2823 2890971 - 2891534 + | putative MobA-related protein idi 2891589 - 2892170 + | isopentenyl diphosphate isomerase TERM 3736 2892192 - 2892175 - T 100 -10.5 -5.33848 | opp_overlap 2892175 AGCACAATTAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAATGT lysS 2893730 - 2892213 - | lysine tRNA synthetase, constitutive prfB 2894838 - 2893740 - | peptide chain release factor RF-2 TERM 3737 2894831 - 2894845 + g 74 -2.8 -4.87892 | TTTACCGGATTAATT TCAAAC ATG GTCTGA TTTCTTTTATTGAGC TERM 3738 2894881 - 2894907 + r 100 -11.7 -5.28778 | gap 1, opp_overlap 2894881 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGATAAT TERM 3739 2894907 - 2894881 - R 86 -11.7 -3.30903 | gap 1, opp_overlap 2894881 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGATAAT recJ 2896662 - 2894929 - | ssDNA exonuclease, 5'--> 3'-specific TERM 3740 2895102 - 2895062 - G 72 -5.9 -4.3586 | overlap 2895066 2895068 GTATCGACATTAAAA GCAATACCGTCCAGCAGCG GAC CGCCGCCGACCGGTTCGAC CATGACTTTCAAATG TERM 3741 2895098 - 2895066 - G 79 -9.7 -3.73858 | overlap 2895062 2895068 CGACATTAAAAGCAA TACCGTCCAGCAGCG GAC CGCCGCCGACCGGTT CGACCATGACTTTCA TERM 3742 2895096 - 2895068 - G 86 -12.3 -3.44148 | overlap 2895066 2895062 ACATTAAAAGCAATA CCGTCCAGCAGCG GAC CGCCGCCGACCGG TTCGACCATGACTTT TERM 3743 2896063 - 2896051 - G 72 -4.7 -4.68593 | CTGATCACGCAAAAA GGTGC GCA GCGCC AGCATTAAATAAAAC dsbC 2897378 - 2896668 - | protein disulfide isomerase II xerD 2898299 - 2897403 - | site-specific tyrosine recombinase fldB 2898411 - 2898932 + | flavodoxin 2 ygfX 2899379 - 2898972 - | hypothetical protein ygfY 2899626 - 2899360 - | hypothetical protein EFER_2833 2899774 - 2899616 - | hypothetical protein ygfZ 2899878 - 2900858 + | enzyme component involved in 2-methylthio-6-iodeadenosine formation TERM 3744 2900895 - 2900908 + T 76 -8.1 -4.09685 | opp_overlap 2900861 2900860, overlap 2900860 2900892 TTTATCGCCTGATGC GACGC TGAC GCGTC TTTTCAGGCCTACAA yqfA 2901594 - 2900935 - | putative hemolysin, inner membrane subunit TERM 3745 2901421 - 2901403 - G 70 -5.2 -4.3255 | CGTCGAAGCAAGAAA CAGCAGGA TCA TACTGCCG CCATAGAGACTGTAA TERM 3746 2901644 - 2901597 - R 76 -9.2 -3.50853 | overlap 2901598 2901612 GCTTCTGAACCATAA CTTACTCCGGAGAAACGTACAC GCAC GTGAACACTTCTCCAGCGTAAC TGAGAATAGTTCCAG TERM 3747 2901643 - 2901598 - R 88 -12.7 -2.70298 | overlap 2901597 2901612 CTTCTGAACCATAAC TTACTCCGGAGAAACGTACAC GCAC GTGAACACTTCTCCAGCGTAA CTGAGAATAGTTCCA yqfB 2902069 - 2901758 - | hypothetical protein bglA 2902108 - 2903547 + | 6-phospho-beta-glucosidase A TERM 3748 2903556 - 2903581 + T 100 -17.7 -4.09511 | GCTTTAACTCCTGCA TGTTACCCGCC AGTT GGCGGGTAACA TTTTGGACGAGTCTT EFER_2838 2904533 - 2903595 - | putative outer membrane protein TERM 3749 2903776 - 2903789 + g 100 -8.1 -5.26875 | TGGGTATTAATTACG CTGCC ATTA GGCAG TTTTTTCGTTCCAGA TERM 3750 2904166 - 2904182 + g 72 -5.1 -4.5032 | overlap 2904167 CCCTCTATATGCTCA GGAGACA GAT TGTCTCG TTTGTTATTGATATA TERM 3751 2904905 - 2904918 + r 76 -9.5 -3.56092 | opp_overlap 2904905 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAGATAGTCG TERM 3752 2904918 - 2904905 - R 85 -9.5 -4.24123 | opp_overlap 2904905 TTAACAAGCTGAAAA GGCGC CGAA GCGCC TTTAGAAGATAGTCG gcvP 2907817 - 2904944 - | glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex gcvH 2908325 - 2907936 - | glycine cleavage complex lipoylprotein gcvT 2909442 - 2908348 - | aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex TERM 3753 2909846 - 2909823 - R 100 -10.3 -4.39386 | overlap 2909817 TTCAAATGAGGAAAA TCTCCCGGC GAAAAA ACCGGGAGA TGAAAGTGTGATGGG visC 2911092 - 2909890 - | putative oxidoreductase with FAD/NAD(P)-binding domain TERM 3754 2910492 - 2910504 + g 73 -9.1 -3.67775 | opp_overlap 2910480 AAACCTGTCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 2912293 - 2911115 - | 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding pepP 2913615 - 2912290 - | proline aminopeptidase P II ygfB 2914219 - 2913641 - | hypothetical protein TERM 3755 2914613 - 2914594 - gR 77 -3.4 -5.08601 | overlap 2914601 TTAGCGCAAGAAAAA GCGAAGAC TCGT GACTACGC GGCAAGTATGGAACA zapA 2914387 - 2914716 + | protein that localizes to the cytokinetic ring EFER_2848 2915043 - 2914666 - | hypothetical protein TERM 3756 2915381 - 2915404 + Gr 74 -3 -4.91109 | overlap 2915382 2915385 CTTTGATGAGTACGG TCAGCGCCTG GGAA TGGGCGGTGG TTTTTATGATCGGAC ygfA 2915010 - 2915558 + | putative ligase TERM 3757 2915559 - 2915580 + Tr 72 -10.1 -2.74488 | GTCTGGGAGTGGTAA GGGCGATAC ACCC GCATCGCCC TGATTGACATCGTTG TERM 3758 2915734 - 2915753 + Tr 90 -11.4 -3.66178 | ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 3759 2915901 - 2915923 + Tr 100 -13.4 -3.44146 | opp_overlap 2915901 GAAACGGATAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTGATTGTCAGAGAA TERM 3760 2915923 - 2915901 - TR 100 -15.6 -5.33866 | opp_overlap 2915901 GAAACGGATAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTGATTGTCAGAGAA serA 2917177 - 2915945 - | D-3-phosphoglycerate dehydrogenase rpiA 2918079 - 2917420 - | ribose 5-phosphate isomerase, constitutive TERM 3761 2917891 - 2917881 - G 71 -3.2 -4.8048 | CGTTGAGATCAAAAA CGGT AAT ACCA AGGCTTTTCAGCTTT TERM 3762 2918481 - 2918508 + G 82 -11.3 -3.42459 | GGAAGAAGAGTGGCT GGGTGATGAGC AAACCG GCTCAACACCC TTGCTGTTATCACTG argP 2918239 - 2919132 + | DNA-binding transcriptional activator, replication initiation inhibitor TERM 3763 2919163 - 2919135 - T 75 -7.4 -4.30576 | opp_overlap 2919134 2919137, overlap 2919136 2919137 GCGTCAGGATTAAAA TTTTCACCCGGT GTGAA ACCGGGTGAATT GTTTTACTGGGCTTT TERM 3764 2919162 - 2919136 - T 79 -10.9 -3.18024 | opp_overlap 2919134 2919137, overlap 2919135 2919137 CGTCAGGATTAAAAT TTTCACCCGGT GTGAA ACCGGGTGAAT TGTTTTACTGGGCTT TERM 3765 2919137 - 2919161 + T 100 -14.4 -4.25658 | opp_overlap 2919136 2919135 2919137, overlap 2919134 GTCAGGATTAAAATT TTCACCCGGT GTGAA ACCGGGTGAA TTGTTTTACTGGGCT TERM 3766 2919161 - 2919137 - T 100 -14.4 -2.50493 | opp_overlap 2919137 2919134, overlap 2919136 2919135 GTCAGGATTAAAATT TTCACCCGGT GTGAA ACCGGGTGAA TTGTTTTACTGGGCT yggE 2919907 - 2919167 - | hypothetical protein TERM 3767 2919977 - 2919946 - R 100 -12.4 -4.06055 | opp_overlap 2919946 2919942 ATTGCCCAAAGTAAA GGGCGCATAACCAA AAGT TTAGTCATACGCCC TTAATTTTACCATCA argO 2920823 - 2920188 - | arginine transporter TERM 3768 2920953 - 2920928 - R 89 -11.9 -3.33839 | opp_overlap 2920926, overlap 2920926 AAAACTAATAAGAGA GAGGCCAGAGA GTAT TATCTGGCCTC AGCGTTGATTATGCA mscS 2921822 - 2920962 - | mechanosensitive channel TERM 3769 2921987 - 2921971 - R 82 -5.7 -5.00616 | overlap 2921974 CTTTTGGTGAAAAAA GATCCGC AGA GCGGGCC TCAGACAGATAGCAA TERM 3770 2922080 - 2922057 - R 74 -4.7 -4.85599 | gap 1 TCCAGCCTACAAAAA CCTGCAA-AT TCAAT ATATTGCAGG ATACGTGTAGGCCTG TERM 3771 2922090 - 2922116 + r 95 -5 -5.79595 | overlap 2922091 TGCAGGATACGTGTA GGCCTGATAAGC GTA GCGCATCAGGCA TTTTTTCTTTTGGCG TERM 3772 2922091 - 2922115 + r 77 -8.5 -4.0613 | overlap 2922090 GCAGGATACGTGTAG GCCTGATAAGC GTA GCGCATCAGGC ATTTTTTCTTTTGGC TERM 3773 2922155 - 2922139 - R 100 -11.5 -5.40072 | TTTTGGCGAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fbaA 2923259 - 2922180 - | fructose-bisphosphate aldolase, class II TERM 3774 2923318 - 2923344 + r 91 -7.3 -5.37865 | gap 1, opp_overlap 2923322, overlap 2923319 2923322 TAAAAGCGCGCTGAA ACA-AGGGCAGG TTTC CCTGCCCTGTGA TTTTTTACTTCTTAG TERM 3775 2923319 - 2923343 + r 88 -10.8 -3.81092 | gap 1, opp_overlap 2923322, overlap 2923318 2923322 AAAAGCGCGCTGAAA CA-AGGGCAGG TTTC CCTGCCCTGTG ATTTTTTACTTCTTA TERM 3776 2923322 - 2923339 + r 95 -12.7 -3.27687 | opp_overlap 2923322, overlap 2923319 2923318 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT TERM 3777 2923339 - 2923322 - R 100 -12.7 -3.90922 | opp_overlap 2923319 2923318 2923322 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT pgk 2924512 - 2923349 - | phosphoglycerate kinase epd 2925581 - 2924562 - | D-erythrose 4-phosphate dehydrogenase TERM 3778 2925659 - 2925673 + r 72 -10 -2.87756 | opp_overlap 2925651 2925652, overlap 2925656 GGGGAAACCTTACCT GTCGCA AAC TGCGAC TGATTGGTTAATTGT yggC 2926579 - 2925866 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 3779 2926084 - 2926074 - G 85 -3.2 -5.38398 | ATAAAAACAGAAAAA TCGC AGA ACGA TGCCAACGCCCGCCA TERM 3780 2926229 - 2926249 + g 74 -7.5 -4.09685 | ATCCCCTTCCATTAC CTGGCGCAG ATT TTCCGCCAG TTTTGCCACATCGAA yggD 2927085 - 2926576 - | putative DNA-binding transcriptional regulator yggF 2928072 - 2927107 - | putative hexoseP phosphatase TERM 3781 2927458 - 2927433 - G 83 -9.7 -4.10188 | gap 1, opp_overlap 2927439 CACAGGCAGAAATAA CACCTTCCGGCG CGC CGCCG-ATGGTG TACATCACATCGTAA TERM 3782 2927694 - 2927710 + g 75 -4.3 -4.81551 | opp_overlap 2927683 TCGAGCCCGCCGCAA GCCGGTT AAC GACCAGC TTTTTCATATACATA TERM 3783 2927943 - 2927981 + g 82 -2.5 -5.42605 | overlap 2927951 2927962 GAAAAGCGACATCGT TTAATG-CCTGGCGCATCG CGG TGAC-CGCCAGGCCATCAA TTTTATTTTTGTTGC TERM 3784 2928014 - 2928033 + g 87 -13.6 -3.05384 | overlap 2928016 CATCCGGTTTGCGGC CAGGCAGC CAAC GCTGCCTG TTCCGTAACGCGAAA yggP 2929346 - 2928069 - | putative dehydrogenase TERM 3785 2928693 - 2928707 + g 78 -5.6 -4.76041 | overlap 2928695 CGGCAGCAGCTTCTG CACCTG TGC CAGGCG TTTTTCGTCGATATC cmtA 2930749 - 2929361 - | fused mannitol-specific PTS enzymes: IIB component ; IIC component cmtB 2931220 - 2930777 - | putative mannitol-specific enzyme IIA component of PTS TERM 3786 2931466 - 2931479 + H 86 -6.7 -5.00339 | opp_overlap 2931466 ATTTATTAATTGAAA GTCCA AAAA TGGAC TTTTTAGTTATTCAT TERM 3787 2931664 - 2931683 + G 72 -5.7 -4.56883 | overlap 2931677 TTACTGTTGGCGTAC TGGCAGT CATTAC GCTGCCA TTTCTTTCGTATTAC EFER_2866 2931588 - 2932505 + | putative membrane protease TERM 3788 2932511 - 2932528 + T 100 -14.1 -3.31461 | opp_overlap 2932511 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTCTCACAATGCATC TERM 3789 2932528 - 2932511 - T 100 -14.1 -5.65513 | opp_overlap 2932511 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTCTCACAATGCATC tktA 2934542 - 2932551 - | transketolase 1, thiamin-binding TERM 3790 2934090 - 2934047 - G 72 -8.1 -3.88498 | opp_overlap 2934076 CCGCCAGAGAGCAAA CTTCGTGGGAGATGCCTTC CATCAT GCAGCCATCGCCCATGAAG GCGTAGGTGTAGTGG TERM 3791 2934237 - 2934253 + g 83 -10.1 -4.13945 | opp_overlap 2934236, overlap 2934238 TGCGGTGTAACCCAC TTCCGGG TGA CCCGGAG TTTTGGAGTGCAGCT TERM 3792 2934238 - 2934252 + g 75 -11.4 -3.08046 | opp_overlap 2934236, overlap 2934237 GCGGTGTAACCCACT TCCGGG TGA CCCGGA GTTTTGGAGTGCAGC EFER_2868 2934585 - 2934749 + | hypothetical protein yggG 2934820 - 2935578 + | putative peptidase TERM 3793 2935586 - 2935611 + T 100 -14.9 -4.4078 | opp_overlap 2935575 TTAAGTGATTTCATA TTTCTCCGACA GGAA TGTCGGAGAAA TTTTCATTCAGGGCC EFER_2870 2937226 - 2935664 - | conserved hypothetical protein; putative exported protein TERM 3794 2937125 - 2937141 + g 83 -6.5 -5.02287 | AGCTTCTTTGTCTTG TTGCAGC TGT GCGGCAA TTTTCTGTTTTTCTG TERM 3795 2937206 - 2937196 - G 78 -5.4 -4.82212 | GAAATAACAAACAAA GAAG GGG CTTC CAGGGAAGAGTGCGT TERM 3796 2937346 - 2937324 - R 80 -9.9 -3.60865 | overlap 2937318 GACTTTAAATGATAA GCCCCTTGT GCCAT ACAAGGGAC TGTGCAAAAAATTCA speB 2938296 - 2937376 - | agmatinase TERM 3797 2938365 - 2938333 - R 100 -14.9 -6.02914 | opp_overlap 2938333 2938328 TCGATATAAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGGTAGAA TERM 3798 2938333 - 2938365 + r 100 -14.9 -3.30701 | opp_overlap 2938333, overlap 2938328 TCGATATAAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGGTAGAA EFER_2872 2939644 - 2938487 - | putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase EFER_2875 2940452 - 2940297 - | hypothetical protein TERM 3799 2941866 - 2941851 - g 76 -3.9 -4.89852 | CCACACGGATAAAAA CGCGA CTATTT CCGCG GATATTGTCAGTGGC TERM 3800 2942420 - 2942406 - g 86 -4.2 -5.43866 | TAACCTGGAAAAAAA TGCTGA GTT TCTGCA GAAAGGCGGGATCAC TERM 3801 2943950 - 2943921 - g 74 -10.8 -3.18199 | overlap 2943895 2943939 GAATCCGGAACCTAA TCCGAATCCGGA ACCTAA TCCGAATCCGGA ACCTAACCCGAACCC TERM 3802 2944155 - 2944145 - g 81 -6.8 -4.59342 | GTGAGCAGAAACAAA CCAC TAT GTGG ATGCGCCATGAAGGT EFER_2876 2940961 - 2944998 + | putative beta-barrel outer membrane protein, similar to AidA-I adhesin-like protein TERM 3803 2945049 - 2945020 - f 74 -10.1 -3.16033 | opp_overlap 2945018 2945020, overlap 2945018 2945017 TAATCAGTAAAATGA GAGAGCCGAAC GGGAGATA ATTCGGCTCTC TGTGTCATTTTCTTG TERM 3804 2945020 - 2945049 + F 72 -9.4 -3.14327 | opp_overlap 2945020 2945018 2945017, overlap 2945018 TAATCAGTAAAATGA GAGAGCCGAA CGGGAGATAA TTCGGCTCTC TGTGTCATTTTCTTG EFER_2877 2945230 - 2945493 + | conserved hypothetical protein, putative membrane protein TERM 3805 2945498 - 2945527 + T 76 -10.8 -2.71693 | opp_overlap 2945499, overlap 2945494 TTATGACCTGAGAAA AGGTTGGGTGTT GTATAA AACACCCAACCA TCGCTTTAATTACTC TERM 3806 2945526 - 2945499 - T 100 -14.3 -4.40804 | opp_overlap 2945498 2945494 TATGACCTGAGAAAA GGTTGGGTGTT GTATAA AACACCCAACC ATCGCTTTAATTACT speA 2947513 - 2945537 - | biosynthetic arginine decarboxylase, PLP-binding TERM 3807 2945842 - 2945832 - G 81 -6.8 -4.59342 | overlap 2945834 CCGACCATAAAGAAA CCGA GCA TCGG CGGATTCTCCGGATC TERM 3808 2947626 - 2947641 + G 74 -3.2 -4.92756 | GCGTATGCTGGTGTT CCGACT GCGC AATCGG TTTCTTTTTCATAAT TERM 3809 2947730 - 2947713 - g 85 -8.5 -4.52703 | opp_overlap 2947703, overlap 2947703 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGCT EFER_2879 2947615 - 2947980 + | conserved hypothetical protein yqgC (fragment) TERM 3810 2947969 - 2947993 + T 91 -7.2 -5.27335 | gap 1, overlap 2947973 ACCCGGCTGGAAGTG GCGACACGATG ACTT CGTCGTGT-GC TTTTTATTTAAGCCG TERM 3811 2948007 - 2948017 + T 82 -8.2 -4.40804 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCGTCATG yqgD 2948266 - 2947997 - | hypothetical protein TERM 3812 2948783 - 2948771 - g 91 -9.1 -4.7078 | TGAAGTACGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 3813 2949382 - 2949370 - g 72 -5.5 -4.57482 | opp_overlap 2949370 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGCGA metK 2948307 - 2949461 + | methionine adenosyltransferase 1 TERM 3814 2949485 - 2949503 + F 100 -11.7 -5.69262 | CGCCTTCGTCTTCAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTTGTAA TERM 3815 2949791 - 2949816 + F 71 -9.9 -2.70143 | opp_overlap 2949791 2949792, overlap 2949788 AATAAACATAATGAA TGTTAGTGTAA GCGA TTACACTAACG TGATGTGCTTCGCAT TERM 3816 2949816 - 2949791 - f 70 -7.7 -3.60939 | opp_overlap 2949788 2949791, overlap 2949792 AATAAACATAATGAA TGTTAGTGTAA GCGA TTACACTAACG TGATGTGCTTCGCAT TERM 3817 2949815 - 2949792 - f 77 -11.2 -2.74937 | opp_overlap 2949791 2949788, overlap 2949791 ATAAACATAATGAAT GTTAGTGTAA GCGA TTACACTAAC GTGATGTGCTTCGCA TERM 3818 2949818 - 2949832 + F 77 -6.4 -4.58663 | overlap 2949788 CGATTACACTAACGT GATGTG CTT CGCATC TTTTTACGCACTACT galP 2949897 - 2951291 + | D-galactose transporter sprT 2951368 - 2951865 + | hypothetical protein TERM 3819 2952198 - 2952184 - g 71 -2.7 -4.77757 | opp_overlap 2952193, overlap 2952185 GCGCAAAAATGAAAA CCGCG CCAGC CGCGT AGAGTGGGAACACGT TERM 3820 2952456 - 2952440 - g 79 -2.1 -5.28942 | opp_overlap 2952455 GATTTCAAAGAAAAA GCCGCCG AGC CACCAGC ACGTGCACGCGGTGC endA 2951960 - 2952667 + | DNA-specific endonuclease I TERM 3821 2952715 - 2952737 + F 71 -4.7 -4.71061 | opp_overlap 2952716, overlap 2952716 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT TERM 3822 2952716 - 2952736 + F 71 -8.2 -3.41913 | opp_overlap 2952716, overlap 2952715 ACCCCACGCGTACAA CCGCGTGG GGAGA CGACGCGG ATTTTTAACTATGCG TERM 3823 2953445 - 2953459 + G 76 -7.8 -4.17089 | GCTCACCGCCATTAC CGCGCT ACA AGTGCG TTTTGGCGATTTGGG yggJ 2952747 - 2953478 + | hypothetical protein TERM 3824 2953850 - 2953836 - g 70 -5.6 -4.44046 | opp_overlap 2953836, overlap 2953832 2953837 CTGATCGTAAACAAA CCGCAG AGC CTGCGC GATTGTAACGAAAAA gshB 2953491 - 2954441 + | glutathione synthetase TERM 3825 2954478 - 2954518 + F 86 -6.7 -5.00616 | opp_overlap 2954478 CCATAAAGACTAAGA GTGACAGCGCCCATCTTTC CCC GCATACTGGGCGCTGTTGC TTTTTTGAACCAGGA yqgE 2954550 - 2955113 + | hypothetical protein TERM 3826 2955484 - 2955467 - g 78 -7.7 -4.41348 | opp_overlap 2955480 CGGGCGCTAAATAAA GGCAAAG TTGA CTCTGCC TCTGCGGTTATCATT yqgF 2955113 - 2955529 + | Holliday junction resolvase yggR 2956516 - 2955536 - | transporter TERM 3827 2956667 - 2956648 - g 83 -5.7 -5.13722 | overlap 2956649 GTCAGTAAAACAAAA CCTGCGA GCGCCA TCGCAGA AGCCATTGATGCCGG TERM 3828 2956814 - 2956802 - g 72 -4.7 -4.65916 | overlap 2956769 2956803 TGCAGTCTAATAAAA GCCGC CTG GTGGC AGAACATTTCGACTG yggS 2956534 - 2957238 + | putative enzyme yggT 2957256 - 2957822 + | conserved hypothetical protein; putative inner membrane protein yggU 2957819 - 2958109 + | hypothetical protein yggV 2958117 - 2958710 + | dITP/XTP pyrophosphatase TERM 3829 2959565 - 2959553 - g 93 -10.5 -4.30576 | opp_overlap 2959553 2959551 2959550 2959557 TGCGCACCACCAAAA CGCGG CAC CCGCG TGGTTTTATGCAGGG TERM 3830 2959553 - 2959565 + G 74 -10.5 -3.1733 | opp_overlap 2959553, overlap 2959551 2959550 2959557 TGCGCACCACCAAAA CGCGG CAC CCGCG TGGTTTTATGCAGGG yggW 2958703 - 2959839 + | putative oxidoreductase TERM 3831 2959836 - 2959873 + F 82 -8.5 -4.37658 | opp_overlap 2959825 2959840 2959843 2959847, overlap 2959825 2959839 2959840 2959843 2959847 ATTATTCCTCGCTGA GTAATCATTAATGCGCC TGCG GGCGCATTAATCACTTC TTTTATCCCCCCGTT TERM 3832 2959839 - 2959870 + F 86 -8.8 -4.30995 | opp_overlap 2959840 2959843 2959847, overlap 2959836 2959840 2959843 2959847 ATTCCTCGCTGAGTA ATCATTAATGCGCC TGCG GGCGCATTAATCAC TTCTTTTATCCCCCC TERM 3833 2959840 - 2959869 + F 93 -12.3 -3.18115 | opp_overlap 2959840 2959843 2959847, overlap 2959839 2959836 2959843 2959847 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTATCCCCC TERM 3834 2959869 - 2959840 - f 93 -12.3 -3.14132 | opp_overlap 2959840 2959839 2959836 2959843 2959847, overlap 2959843 2959847 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTATCCCCC TERM 3835 2959843 - 2959866 + F 95 -14 -2.78052 | opp_overlap 2959840 2959843 2959847, overlap 2959840 2959839 2959836 2959847 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTATCC TERM 3836 2959866 - 2959843 - f 95 -14 -2.77899 | opp_overlap 2959843 2959840 2959839 2959836 2959847, overlap 2959840 2959847 CTCGCTGAGTAATCA TTAATGCGCC TGCG GGCGCATTAA TCACTTCTTTTATCC TERM 3837 2959847 - 2959862 + F 78 -10.4 -3.26842 | opp_overlap 2959843 2959840 2959847, overlap 2959843 2959840 2959839 2959836 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT TERM 3838 2959862 - 2959847 - f 78 -10.4 -3.29096 | opp_overlap 2959847 2959843 2959840 2959839 2959836, overlap 2959843 2959840 CTGAGTAATCATTAA TGCGCC TGCG GGCGCA TTAATCACTTCTTTT TERM 3839 2959923 - 2959941 + F 70 -7.6 -3.65002 | opp_overlap 2959923 2959927, overlap 2959927 ATATTTCTTACTGAA TAAATATC GAC GATATTTA TTATATATACTTAAT TERM 3840 2960509 - 2960519 + G 78 -5.4 -4.74801 | overlap 2960506 AGATCAGGCGCACTT CAAC AAA GTTG TTTTTGGTGAAGTTG EFER_2895 2960153 - 2961139 + | Putative c4-dicarboxylate transport system binding protein TERM 3841 2961166 - 2961142 - f 76 -9.9 -3.38812 | opp_overlap 2961143 2961146, overlap 2961140 2961143 CGCTGCTCAATAATA TTCCGGGCCAG TCT CTGGCCCTGAT TTTCCAGGATGCTTA TERM 3842 2961165 - 2961143 - f 93 -13.4 -2.63073 | opp_overlap 2961143 2961146, overlap 2961142 2961140 GCTGCTCAATAATAT TCCGGGCCAG TCT CTGGCCCTGA TTTTCCAGGATGCTT TERM 3843 2961143 - 2961165 + F 100 -13.4 -4.10429 | opp_overlap 2961142 2961140 2961143, overlap 2961146 GCTGCTCAATAATAT TCCGGGCCAG TCT CTGGCCCTGA TTTTCCAGGATGCTT TERM 3844 2961146 - 2961162 + F 100 -13.7 -3.08508 | opp_overlap 2961143 2961142 2961140, overlap 2961143 GCTCAATAATATTCC GGGCCAG TCT CTGGCCC TGATTTTCCAGGATG TERM 3845 2961217 - 2961231 + G 77 -7 -4.53303 | overlap 2961207 AAACTTGCGGTAGAC CGCGTC ATT GCCGCG TTTTCTGTCGCCGTC EFER_2896 2961175 - 2961687 + | putative TRAP-type C4-dicarboxylate transport system, small permease component TERM 3846 2962326 - 2962312 - g 74 -8.6 -3.87994 | ACCCACTTTCAGAAA GAGCAA CCC TTGCTC AGGCATGTAAAGCGT ygiK 2961687 - 2962988 + | c4-dicarboxylate permease TERM 3847 2963084 - 2963043 - T 84 -11.2 -3.68827 | gap 1, opp_overlap 2963050, overlap 2963046 GATGTATGACGGAAA TTACTCATTGCCGGATAAA ACGTA TTTATCCGGCAATGA-TAT GCAACAATTATTTAA TERM 3848 2963082 - 2963046 - T 100 -15.4 -2.95116 | opp_overlap 2963050, overlap 2963043 GTATGACGGAAATTA CTCATTGCCGGATAAA ACGTA TTTATCCGGCAATGAT ATGCAACAATTATTT TERM 3849 2963050 - 2963078 + T 100 -14.8 -2.62515 | opp_overlap 2963046 2963043 GACGGAAATTACTCA TTGCCGGATAAA ACGTA TTTATCCGGCAA TGATATGCAACAATT EFER_2898 2964096 - 2963092 - | conserved hypothetical protein; putative exported protein TERM 3850 2964206 - 2964184 - R 84 -11.2 -3.66356 | overlap 2964186 AGTCTGAAGTGTAAA TACCCCGGCA AGA TGCCGGGGCG AGGTGATTAGTACTG TERM 3851 2964204 - 2964186 - R 100 -16 -3.41222 | overlap 2964184 TCTGAAGTGTAAATA CCCCGGCA AGA TGCCGGGG CGAGGTGATTAGTAC ansB 2965259 - 2964213 - | periplasmic L-asparaginase II TERM 3852 2965424 - 2965403 - R 91 -7.9 -4.87318 | CTGAAAATGCAAAAA CGGCACCGC AAAT ACCGTGCCG TTAGAAAAAGAAAGA yggN 2966164 - 2965445 - | conserved hypothetical protein; periplasmic protein TERM 3853 2965522 - 2965541 + g 73 -4.2 -4.7629 | CATCTTTACCAAACT GCTGGAAG TCTT TTTCCTGC TTTTTCCATTCATCC TERM 3854 2966208 - 2966185 - R 85 -4.4 -5.4505 | opp_overlap 2966185 2966186, overlap 2966186 2966188 TCCCTCAAGAAAAAA TTAGGCCAGC ATCT GCTGGCCCGT ATGCTTTATTAGTCC TERM 3855 2966207 - 2966186 - R 72 -7.9 -3.86307 | opp_overlap 2966186 2966185, overlap 2966185 2966188 CCCTCAAGAAAAAAT TAGGCCAGC ATCT GCTGGCCCG TATGCTTTATTAGTC TERM 3856 2966205 - 2966188 - R 100 -12.7 -3.5087 | opp_overlap 2966186 2966185, overlap 2966186 2966185 CTCAAGAAAAAATTA GGCCAGC ATCT GCTGGCC CGTATGCTTTATTAG yggL 2966543 - 2966217 - | hypothetical protein yggH 2967262 - 2966543 - | tRNA (m7G46) methyltransferase, SAM-dependent mutY 2967423 - 2968475 + | adenine DNA glycosylase TERM 3857 2968685 - 2968665 - g 73 -4 -4.78981 | overlap 2968679 ATTAATGAAAAGAAA CTCAACAT GATGA ATGCCGAG CACCGCAAACTGCTG yggX 2968503 - 2968778 + | protein that protects iron-sulfur proteins against oxidative damage TERM 3858 2968809 - 2968782 - f 100 -6.2 -5.8096 | gap 1, opp_overlap 2968784, overlap 2968784 2968786 GATAAAAAATAAAAA CAG-AGCCGGAGG TCA CCTCCGGCAACTT GCATAAAAACAAACA TERM 3859 2968806 - 2968784 - f 93 -9 -4.48934 | opp_overlap 2968784, overlap 2968782 2968786 TAAAAAATAAAAACA GAGCCGGAGG TCA CCTCCGGCAA CTTGCATAAAAACAA TERM 3860 2968804 - 2968786 - f 100 -16 -3.7764 | opp_overlap 2968784, overlap 2968784 2968782 AAAAATAAAAACAGA GCCGGAGG TCA CCTCCGGC AACTTGCATAAAAAC mltC 2968843 - 2969922 + | membrane-bound lytic murein transglycosylase C TERM 3861 2969963 - 2969923 - T 100 -17.1 -3.28924 | opp_overlap 2969911 TACCGCCGCCGATAA TGTTATTTCCGCTGCGTTA ACT TTACGCAGCGGAAATAAAA AATGAGATCTTCATC EFER_2906 2970088 - 2969945 - | hypothetical protein nupG 2970150 - 2971406 + | nucleoside transporter TERM 3862 2971446 - 2971425 - T 100 -12.9 -3.48269 | opp_overlap 2971425, overlap 2971421 2971419 2971410 GTGATGAAACAGCAA CGGGGCGCC AGAA GGTGCCCCG TTTTTTATTCTCACT TERM 3863 2971425 - 2971446 + T 100 -15.1 -5.56673 | opp_overlap 2971421 2971419 2971410 2971425 GTGATGAAACAGCAA CGGGGCGCC AGAA GGTGCCCCG TTTTTTATTCTCACT speC 2973598 - 2971457 - | ornithine decarboxylase, constitutive TERM 3864 2971766 - 2971777 + g 70 -3.6 -4.62904 | CGGGAAACTCAGCTG GCGG AACA TCGC TTTTTGCAGGTCTTT TERM 3865 2972778 - 2972789 + g 72 -5.8 -4.36914 | AGACGGAATGGGCGC GGCT GGTC AGCC TTTTCTGGCGCAACG TERM 3866 2973637 - 2973613 - H 75 -5.7 -4.60041 | overlap 2973615 2973625 ATTCATTTCGAAAAA GTTAGCACC AGAGCAA GGTGCTAGC CTTGCCCGAAGAGTC TERM 3867 2973724 - 2973688 - H 70 -9.5 -2.86164 | opp_overlap 2973691, overlap 2973700 GCTGCAACCACCAGA CATCAGTAAAAACAGAG TCA CTCTGCGCTTACTGTTG TCCTTCAGTGAGCCT TERM 3868 2973712 - 2973700 - H 91 -7.7 -4.79826 | opp_overlap 2973691, overlap 2973688 AGACATCAGTAAAAA CAGAG TCA CTCTG CGCTTACTGTTGTCC yqgA 2973966 - 2974706 + | conserved hypothetical protein; putative inner membrane protein EFER_2910 2974800 - 2974949 + | hypothetical protein TERM 3869 2975231 - 2975216 - f 73 -5.4 -4.59853 | gap 1, opp_overlap 2975206 2975216, overlap 2975217 2975218 GGAAGCCCGCAAAAA GC-GCGA TTC TCGCAGC TAATCTACTGGTATC TERM 3870 2975498 - 2975488 - f 76 -6.8 -4.52857 | ATGGTCCAGACAAAA TGCC AGA GGCA TGACACATCGGCTAT TERM 3871 2979757 - 2979739 - g 72 -7.5 -3.86897 | TTGACGGGGCATAAA CATCGTT TCGCC AACGATG TGCAGATCTCCATTG yghJ 2975950 - 2980521 + | inner membrane lipoprotein TERM 3872 2980551 - 2980522 - f 80 -9.9 -3.61517 | opp_overlap 2980521, overlap 2980523 ATGCCTGCTGAATAA CCCGGATAAGGCG TTCA CGCCGCATCCGGC ATGATATAAGGCGCA TERM 3873 2980550 - 2980523 - f 93 -13.4 -2.76696 | opp_overlap 2980521, overlap 2980522 TGCCTGCTGAATAAC CCGGATAAGGCG TTCA CGCCGCATCCGG CATGATATAAGGCGC TERM 3874 2980594 - 2980561 - f 100 -15.4 -3.54475 | gap 1, opp_overlap 2980559 2980558 TCCGGCATGATATAA GGCGCACCGGGTCAA CACAT TTG-CCCGATGCGCC AGCTTATCGGGCCTG pppA 2980677 - 2981486 + | bifunctional prepilin leader peptidase and methylase TERM 3875 2981659 - 2981644 - g 70 -4.6 -4.50058 | overlap 2981645 CAGCCATAATGAAAA TGCCAG TTTA CTGGCG AAAAAACAGGCGCAA yghG 2981552 - 2981962 + | hypothetical protein TERM 3876 2981994 - 2982008 + G 77 -8.6 -4.13872 | TGGCGCGGGTTGTTT TTCGTG ACG CACGAA TTTATCTCATTCAAT TERM 3877 2982227 - 2982215 - g 70 -6.2 -4.1673 | opp_overlap 2982225, overlap 2982189 CAATCGGTGAATAAA CCGC CCCGC GCGG ATGCAAAACCGTTCG yghF 2981978 - 2982931 + | putative secretion pathway protein, C-type protein TERM 3878 2983034 - 2983056 + G 76 -10.6 -3.36492 | opp_overlap 2983028 2983027 CAAAAAAGCGTTTAC TGCCGCTG GTGCTGG CAGCGGCA TTATGCAGTTCACCG TERM 3879 2983686 - 2983659 - g 73 -4.1 -4.73388 | gap 1, overlap 2983671 2983672 AAGCCTGACCAAAAA CAGCGGCG-AGA ACCAG CCTGCGACGCTG AAATCTCAAATTGTC epsD 2982961 - 2985021 + | general secretion pathway protein D precursor TERM 3880 2985282 - 2985302 + G 83 -5.3 -5.05782 | opp_overlap 2985284, overlap 2985284 CGCCAGCTGATGGAA GATCTCGGT TCC GCCGAGGAC TTTTTTACCCTCGCT TERM 3881 2985583 - 2985573 - g 72 -4.6 -4.59109 | GATATCGCCGAAAAA CGCG TAC CGCA GGATGGGCGCATTGC TERM 3882 2985705 - 2985692 - g 75 -4.5 -4.83169 | opp_overlap 2985700 2985701, overlap 2985693 ACTGCTGGACAAAAA CCAGG CTCG CCTGA CGCTGGAGCGTCTGG epsE 2985021 - 2986514 + | general secretion pathway protein E TERM 3883 2987317 - 2987334 + G 70 -4.7 -4.57341 | GGGGCGTGTTGCGCG CGGGCTG AATA CGGCGCG TTTTTCCCGCACGTT epsF 2986514 - 2987737 + | General secretion pathway protein F EFER_2918 2987727 - 2988209 + | putative general secretion pathway protein G precursor (epsG-like) TERM 3884 2988353 - 2988330 - g 90 -8 -5.00616 | opp_overlap 2988330 CCGCCCGCGAAAAAA GCGGCGCAGG ATTT CCTGGCCCGC TTTGCGCAGTTTAAG TERM 3885 2988446 - 2988462 + G 74 -10.1 -3.53091 | TATGCAGCGTCGTCA CGGGCAG TGG TTGCCCG TTTCCGCGACCCGGT EFER_2919 2988213 - 2988776 + | conserved hypothetical protein; putative exported protein TERM 3886 2988807 - 2988818 + G 77 -5.8 -4.62783 | TGCTGGAAGTGATGA TCGC ACTG GCGA TTTTTGCGCTGGCTG EFER_2920 2988773 - 2989144 + | putative type II secretion protein (GspI-like) TERM 3887 2989184 - 2989195 + G 77 -5.8 -4.67353 | TACTGGAAATGCTGG TGGC GATA GCCA TTTTTGCCTCACTGG EFER_2921 2989141 - 2989746 + | conserved hypothetical protein; putative exported protein TERM 3888 2989974 - 2989958 - g 73 -3.5 -4.77757 | opp_overlap 2989971 CCTGAAAAATGAAAA GCGCGTG CAT CTGGCGC AGCCGTGGGCTTCTG TERM 3889 2989978 - 2989996 + G 76 -8 -4.16842 | overlap 2989971 TGCATCTGGCGCAGC CGTGGGCT TCT GGCCCTCG TTTGTTGCCACTGCC TERM 3890 2990407 - 2990421 + G 74 -6.4 -4.57837 | TCAACACCCTGGACG TCACGC AAA GTGTGA TTTTTGAGGCGCTGT TERM 3891 2990593 - 2990575 - g 76 -3.8 -4.97888 | AAAAAAAGCTAAAAA CCGTCC TGAGCGT GGACAG CAATTACTTCTGGCT EFER_2922 2989743 - 2990720 + | putative type II secretion protein (GspK-like) yghE 2990717 - 2991895 + | putative secretion pathway protein, L-type protein yghD 2991897 - 2992433 + | putative secretion pathway M-type protein, membrane anchored TERM 3892 2992490 - 2992509 + F 71 -9.2 -2.97771 | overlap 2992493 ATGATAAATGTGGAT ACTGGCGG GCTT CCGCCAGC CTTTCATATTGTGAA TERM 3893 2992493 - 2992510 + F 77 -8.3 -3.97088 | overlap 2992490 ATAAATGTGGATACT GGCGGGC TTCC GCCAGCC TTTCATATTGTGAAC TERM 3894 2992851 - 2992862 + G 72 -5.8 -4.33258 | TCAATATTCTTTTTA TGCG CAAC CGCA TTTCTGTTTGCAGGT TERM 3895 2993527 - 2993515 - g 93 -2.6 -5.63504 | AAGCTGATAAAAAAA GCGC AAATG GCAC CGAAGTCACTGAGCA yafT 2992824 - 2993612 + | conserved hypothetical protein; putative exported protein TERM 3896 2993651 - 2993618 - T 73 -9.7 -3.03203 | opp_overlap 2993613 2993616 2993614 2993614 2993648 2993648, overlap 2993613 2993610 TTATCAATAATCATA CCAGTCTGCCA CGGTATGATTAT TGGCAGACTGG AATATGTTCTCATAT EFER_2926 2994788 - 2994435 - | hypothetical protein EFER_2927 2995280 - 2994993 - | putative global regulatory protein EFER_2928 2996285 - 2995926 - | hypothetical protein EFER_2929 2996876 - 2996511 - | hypothetical protein TERM 3897 2997453 - 2997475 + r 80 -10.5 -3.55524 | overlap 2997455 ATTTATCATTAGTCT CAGCCCGCC TTACC GGCGGGCTA TTCATTTCCGTAATT TERM 3898 2997455 - 2997473 + r 100 -13.1 -3.34609 | overlap 2997453 TTATCATTAGTCTCA GCCCGCC TTACC GGCGGGC TATTCATTTCCGTAA gss 2999348 - 2997489 - | fused glutathionylspermidine amidase ; glutathionylspermidine synthetase TERM 3899 2997610 - 2997654 + g 100 -4.4 -5.58454 | gap 1, opp_overlap 2997610 GTACAGACCTGAATA TATTTTCCGGCTACGTTTGGT AAGC ACCATA-GTTGCTGGTAAATA TTTTTTTGCTCTGCA TERM 3900 2999944 - 2999966 + G 82 -11.4 -3.5511 | overlap 2999942 GGTGCATATCAGCAT GGAGGTAATC AAT GATTATCTCC TCTTTCTCAATAAAA TERM 3901 2999998 - 2999983 - g 81 -4.8 -5.06414 | CTTTCTCAATAAAAA TTTAAC CTGC GTTAAA CCATGGCCACGACAG envY 2999699 - 3000526 + | envelope protein; thermoregulation of porin biosynthesis TERM 3902 3001053 - 3001074 + G 72 -5.8 -4.34771 | gap 1 TCTGGTTACAGGGTG CCGC-GCCG TTCCT CGGCGGTGG TTTTGGTCACTTTTA yghU 3000596 - 3001462 + | S-transferase TERM 3903 3001512 - 3001523 + T 78 -7.2 -4.46212 | GGATAAAGCATTTAC GCCG CATC CGGC TTTTATCATCACGCG hybG 3001780 - 3001532 - | hydrogenase 2 accessory protein hybF 3002134 - 3001793 - | protein involved with the maturation of hydrogenases 1 and 2 TERM 3904 3002036 - 3002001 - G 88 -8.4 -4.67641 | gap 2, opp_overlap 3002001 3002002, overlap 3002002 3002003 3002005 ATTTCAAAACTAAAA CGGACAGCGCTCTCCT CAACGC AGGAGAGCGC-G-CCA ATTTCCAGCCACACG TERM 3905 3002035 - 3002002 - G 72 -9.7 -3.395 | gap 2, opp_overlap 3002001 3002002, overlap 3002001 3002003 3002005 TTTCAAAACTAAAAC GGACAGCGCTCTCCT CAACGC AGGAGAGCGC-G-CC AATTTCCAGCCACAC TERM 3906 3002035 - 3002003 - G 76 -12.1 -2.62977 | gap 1, opp_overlap 3002002 3002001, overlap 3002002 3002001 3002005 TTCAAAACTAAAACG GACAGCGCTCTCCT CAACGC AGGAGAGCGC-GCC AATTTCCAGCCACAC TERM 3907 3002033 - 3002005 - G 71 -11.1 -2.84272 | gap 1, opp_overlap 3002002 3002001, overlap 3002002 3002003 3002001 CAAAACTAAAACGGA CAGCGCTCTCCT CAACGC AGGAGAGCGC-G CCAATTTCCAGCCAC hybE 3002615 - 3002127 - | hydrogenase 2-specific chaperone TERM 3908 3002177 - 3002159 - G 83 -12.4 -3.34398 | opp_overlap 3002158, overlap 3002130 3002157 TCCTGCGGCCAAATA GCAGGGCA CGA CGCCCTGC GTGTGGTACATCCGG hybD 3003102 - 3002608 - | maturation element for hydrogenase 2 TERM 3909 3002750 - 3002763 + g 71 -2.3 -5.0133 | GATTCCGGGATCACG CCGAC CAGG GTCAG TTTTTTCGGAAACTC hybC 3004805 - 3003102 - | hydrogenase 2, large subunit TERM 3910 3004651 - 3004665 + g 72 -4.9 -4.61633 | opp_overlap 3004643, overlap 3004654 3004658 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 3911 3004824 - 3004835 + r 74 -4.4 -5.07652 | overlap 3004813 3004818 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3005980 - 3004802 - | hydrogenase 2 cytochrome b type component hybA 3006956 - 3005970 - | hydrogenase 2 4Fe-4S ferredoxin-type component TERM 3912 3006613 - 3006626 + g 72 -6.7 -4.29106 | CAGTTCGGATCGACG CAGTG CATA CACTG TTTCTTAATGTACGC hybO 3008077 - 3006959 - | hydrogenase 2, small subunit yghW 3008670 - 3008266 - | hypothetical protein EFER_2942 3009593 - 3008667 - | putative enzyme TERM 3913 3008956 - 3008934 - G 70 -4.8 -4.46212 | CTGTCGACCATAAAA CGGCACTG CGCAGGC CAGTTCCG GGTAAGCGACCGCCG TERM 3914 3009249 - 3009262 + g 70 -6.7 -4.12456 | overlap 3009248 ATTCTCATGCACCAC CACCA CGGC TGGTG TTTTGCCGCTCATCT TERM 3915 3009830 - 3009849 + G 70 -10.7 -2.82623 | overlap 3009827 TTTCGGTCACGTTAA CGCGCTG GAATCA CAGCGCG TGATTCTGCGAAAAG yghZ 3009711 - 3010751 + | aldo-keto reductase TERM 3916 3010783 - 3010763 - T 100 -16.1 -3.37056 | opp_overlap 3010752 ATGACGTATTGATAA CGGGCGCGA GAA CCGCGCCCG AATCAGATCAGTGAT yqhA 3011285 - 3010791 - | conserved hypothetical protein; putative inner membrane protein yghA 3011476 - 3012360 + | putative glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain TERM 3917 3012363 - 3012395 + T 100 -8.4 -5.34381 | opp_overlap 3012366, overlap 3012364 3012366 GCATTTAGGCTAAAA AAATGCCCGGTTGT GAAAA GCAACCGGGCATCA TTTTTATTTCGCTTT TERM 3918 3012364 - 3012394 + T 100 -11.9 -3.78189 | opp_overlap 3012366, overlap 3012363 3012366 CATTTAGGCTAAAAA AATGCCCGGTTGT GAAAA GCAACCGGGCATC ATTTTTATTTCGCTT TERM 3919 3012392 - 3012366 - T 100 -13.8 -5.44119 | opp_overlap 3012364 3012363 3012366 TTTAGGCTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTTTTATTTCGC TERM 3920 3012366 - 3012392 + T 100 -14.5 -3.45131 | opp_overlap 3012366, overlap 3012364 3012363 TTTAGGCTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTTTTATTTCGC exbD 3012824 - 3012399 - | membrane spanning protein in TonB-ExbB-ExbD complex TERM 3921 3012772 - 3012740 - G 75 -7 -4.38129 | opp_overlap 3012740 3012744, overlap 3012741 AGATAATCAGCAAAA CCAACATAACGTCG ATAAA CGGCGTCACGTTGA TATCATGCATTTCAC exbB 3013565 - 3012831 - | membrane spanning protein in TonB-ExbB-ExbD complex TERM 3922 3013814 - 3013804 - H 74 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 3923 3013956 - 3013946 - g 81 -4.6 -5.15969 | overlap 3013948 GTGGAAGCCAAAAAA CACG CGA CGCG CAATCGCGCCAATGG TERM 3924 3013964 - 3013948 - g 70 -5.8 -4.20888 | opp_overlap 3013961, overlap 3013946 GGAAGCCAAAAAACA CGCGAC GCGCA ATCGCG CCAATGGCGAGTTGT metC 3013817 - 3015004 + | cystathionine beta-lyase, PLP-dependent yghB 3015144 - 3015803 + | conserved hypothetical protein; putative inner membrane protein TERM 3925 3015804 - 3015848 + T 76 -10.8 -2.72471 | gap 1, overlap 3015803 3015808 TACTGCAACTCCTGA GTATGTAGCCTGTACCCGACA TTTG TG-CGGGTACAGGCTAACTCC CTTGTATCGTCCGCA TERM 3926 3015808 - 3015845 + T 100 -14.4 -2.64051 | overlap 3015804 3015803 GCAACTCCTGAGTAT G-TAGCCTGTACCCGACA TTTG TG-CGGGTACAGGCTAAC TCCCTTGTATCGTCC yqhC 3016761 - 3015841 - | putative DNA-binding transcriptional regulator TERM 3927 3017836 - 3017821 - g 75 -4.6 -4.8622 | TTGTGGAATGAAAAA CGCGAT ACCA AGCGCG AGAAACTGCTGCAAT yqhD 3016933 - 3018096 + | alcohol dehydrogenase, NAD(P)-dependent TERM 3928 3018180 - 3018155 - f 93 -13.3 -2.66912 | opp_overlap 3018156 ACTTAAGTCACACCA CCTCGCCGAAG TCCG CTTCGGCGAGT TCACTCTAAGGAGGA TERM 3929 3018156 - 3018179 + F 100 -16.8 -3.12351 | opp_overlap 3018155 CTTAAGTCACACCAC CTCGCCGAAG TCCG CTTCGGCGAG TTCACTCTAAGGAGG dkgA 3018200 - 3019027 + | 2,5-diketo-D-gluconate reductase A TERM 3930 3019039 - 3019058 + F 100 -11.4 -4.65933 | TTAATTCCTCTCCAC GCCCGGTA TTCC TGCCGGGC TTTATTTTCGAAATA TERM 3931 3019322 - 3019334 + G 70 -4.8 -4.52873 | CTTAGCGCACCGGCC TGGC ATTCC GCCA TTATTTTTGTCGCAA EFER_2953 3019211 - 3020665 + | Putative sodium:sulfate symporter TERM 3932 3020687 - 3020714 + F 88 -10 -4.11773 | opp_overlap 3020682 3020687 3020712, overlap 3020710 3020712 TTATGGCAAATTAAA CCGTTTTTTCTA TCTG TGGAGAAAACGG TTTTAAACCGTATTT TERM 3933 3020724 - 3020712 - f 79 -7.7 -4.3739 | opp_overlap 3020687 3020712 3020710, overlap 3020687 3020682 3020722 TATCTGTGGAGAAAA CGGTT TTA AACCG TATTTAATACCGCAA TERM 3934 3020797 - 3020783 - g 74 -5.8 -4.46854 | TGAGGGAACAATAAA TGAAAA AGA TTTTCA CTATAGGATCGATAC yqhH 3020782 - 3021042 + | putative outer membrane lipoprotein TERM 3935 3021096 - 3021047 - T 81 -5.1 -5.20216 | opp_overlap 3021055 3021056 3021058, overlap 3021052 3021054 CAGACTACTAAAAAA CTAAATTTGTATTCCCGGTAACA TTTC TGCTACCGGGAATAGTTAATTAA CGACCTGTCGCTACT TERM 3936 3021091 - 3021052 - T 78 -7.2 -4.45175 | opp_overlap 3021055 3021056 3021058, overlap 3021047 3021054 TACTAAAAAACTAAA TTTGTATTCCCGGTAACA TTTC TGCTACCGGGAATAGTTA ATTAACGACCTGTCG TERM 3937 3021089 - 3021054 - T 70 -9.8 -2.5366 | opp_overlap 3021055 3021056 3021058, overlap 3021052 3021047 CTAAAAAACTAAATT TGTATTCCCGGTAACA TTTC TGCTACCGGGAATAGT TAATTAACGACCTGT TERM 3938 3021055 - 3021088 + T 81 -11.1 -3.34013 | opp_overlap 3021054 3021052 3021047, overlap 3021056 3021058 TAAAAAACTAAATTT GTATTCCCGGTAACA TTTC TGCTACCGGGAATAG TTAATTAACGACCTG TERM 3939 3021056 - 3021087 + T 100 -14.6 -2.60194 | opp_overlap 3021054 3021052 3021047, overlap 3021055 3021058 AAAAAACTAAATTTG TATTCCCGGTAACA TTTC TGCTACCGGGAATA GTTAATTAACGACCT TERM 3940 3021058 - 3021085 + T 91 -12.8 -2.84098 | opp_overlap 3021054 3021052 3021047, overlap 3021056 3021055 AAAACTAAATTTGTA TTCCCGGTAACA TTTC TGCTACCGGGAA TAGTTAATTAACGAC ygiQ 3023312 - 3021093 - | hypothetical protein TERM 3941 3022310 - 3022325 + g 71 -3.2 -4.74103 | opp_overlap 3022312 GCGGGTTGATCCATA CATAGC GGTC GCCATG TTTTTGCATTAGCGC EFER_2956 3023526 - 3024314 + | putative regulator TERM 3942 3024802 - 3024822 + G 73 -3.9 -4.78107 | overlap 3024794 3024791 TTTCGGACACCCGCT GGGGGATCT TTG AGATCAACC TTTTTGGTGATGCTC TERM 3943 3025158 - 3025174 + G 70 -6.5 -4.16279 | opp_overlap 3025158, overlap 3025170 3025172 TTGCAACAACGTAAA GCGGC AGGACTC GCCGC TTTTAGCGTGCTCTC TERM 3944 3025835 - 3025818 - g 75 -4.9 -4.77036 | TTGCATCAGCAAAAA CAAAACA ATGC TGTTCTG TCACTGCTCGTGGCT TERM 3945 3026049 - 3026038 - g 95 -5.8 -5.41941 | TAAATGAAATAAAAA TCGC ATTT GCGA ATATAAAAAACAAAG EFER_2957 3024639 - 3026111 + | putative Fructuronate reductase EFER_2958 3026108 - 3027124 + | putative L-threonine 3-dehydrogenase TERM 3946 3027589 - 3027599 + G 88 -8.2 -4.68593 | overlap 3027571 3027570 TGGCTCCCCATGGCG GCGC CGA GCGC TTTTTGGGTACTAAC EFER_2959 3027135 - 3028145 + | Ureidoglycolate dehydrogenase EFER_2960 3028218 - 3029201 + | putative c4-dicarboxylate transport system binding protein; putative secreted protein TERM 3947 3029209 - 3029227 + F 90 -11.7 -3.73072 | opp_overlap 3029202 GTATGTAACCCTAAT GGGCAGG TAATT CCTGCCC TTTCATGGAAAACTT EFER_2961 3029243 - 3029725 + | putative membrane protein; putative TRAP-type C4-dicarboxylate transport system, small permease component ygiK 3029694 - 3031040 + | c4-dicarboxylate permease TERM 3948 3031057 - 3031093 + T 90 -10.9 -3.98627 | opp_overlap 3031062, overlap 3031062 AGCAATGTTGAGTGT TTAAAGTGGGCCGGGTA TAT TGCCTGGCCTACCTTGA TTATTGTGTTGCTCA TERM 3949 3031062 - 3031088 + T 91 -13 -2.76117 | opp_overlap 3031062, overlap 3031057 TGTTGAGTGTTTAAA GTGGGCCGGGTA TAT TGCCTGGCCTAC CTTGATTATTGTGTT sufI 3032666 - 3031254 - | repressor protein for FtsI TERM 3950 3032536 - 3032525 - G 77 -5.8 -4.70169 | GTAGAGTCAAGAAAA GTGG CTGT CCAC GGCGGGATTCCAGCA TERM 3951 3032575 - 3032589 + g 77 -10 -3.59979 | opp_overlap 3032568 ACAGGTAATGGCTGT TGCTGC CCG GCAGCA TTTGCCCTCAGCGGA plsC 3033472 - 3032735 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase parC 3035982 - 3033724 - | DNA topoisomerase IV, subunit A TERM 3952 3036092 - 3036075 - R 100 -14.1 -5.0065 | opp_overlap 3036071 3036087 GAGTCACAAAGAAAA GGGCCGC GATG GCGGCCC TGGCTGGGTTTATTT ygiW 3036554 - 3036102 - | hypothetical protein TERM 3953 3036451 - 3036421 - G 93 -8.3 -4.83615 | gap 1, overlap 3036445 GACGGGCCAGAAAAA CCGC-CCTGTTCAG CGGC CAGAACAGGCGCAG AGCATAGCGCCATCA qseB 3036645 - 3037304 + | DNA-binding response regulator in two-component regulatory system with QseC TERM 3954 3037314 - 3037346 + G 93 -2.6 -5.68023 | opp_overlap 3037316 3037317, overlap 3037317 GCATGAAATTCACAC AACGCCTTAGCCTG CGCAT CAGGCTGACGCTTA TTTTTTTAATTCTGG TERM 3955 3037317 - 3037343 + G 93 -8.7 -4.88485 | opp_overlap 3037316 3037317, overlap 3037314 TGAAATTCACACAAC GCCTTAGCCTG CGCAT CAGGCTGACGC TTATTTTTTTAATTC qseC 3037301 - 3038656 + | Sensor protein qseC sensory histidine kinase in two-component regulatory system with QseB, regulates flagella and motility by quorum sensing TERM 3956 3038876 - 3038821 - g 70 -10.4 -3.18199 | opp_overlap 3038829 3038862, overlap 3038824 CAATGGTCAACTGAA TGACACCCTGACCGAAGTCGCGGA TGGCACGC TGCGCGACCTCGGACATGATGTCC GCATCGTTCGCGCCG TERM 3957 3038873 - 3038824 - g 70 -10.7 -2.78712 | opp_overlap 3038829 3038862, overlap 3038821 TGGTCAACTGAATGA CACCCTGACCGAAGTCGCGGA TGGCACGC TGCGCGACCTCGGACATGATG TCCGCATCGTTCGCG mdaB 3038759 - 3039340 + | NADPH quinone reductase ygiN 3039371 - 3039685 + | quinol monooxygenase TERM 3958 3039690 - 3039726 + T 85 -7.4 -4.90525 | gap 2, overlap 3039675 3039694 3039697 CCGGGATTTAATCCT GATCGCTTTGCCCGGCCA CTC TGACCGGGC-AA-TGATC TTTTCTTTAAACTTC TERM 3959 3039694 - 3039724 + T 83 -9.6 -4.06281 | overlap 3039690 3039697 GATTTAATCCTGATC GCTTTGCCCGGCCA CTC TGACCGGGCAATGA TCTTTTCTTTAAACT TERM 3960 3039697 - 3039721 + T 100 -14.3 -3.05714 | overlap 3039694 3039690 TTAATCCTGATCGCT TTGCCCGGCCA CTC TGACCGGGCAA TGATCTTTTCTTTAA parE 3041625 - 3039733 - | DNA topoisomerase IV, subunit B TERM 3961 3039782 - 3039795 + g 71 -2.3 -5.00616 | TGTAACCAGTTGCGA CGATC TTCT GAACG TTTTTTCGCCAGAAG TERM 3962 3041297 - 3041314 + g 77 -3.3 -5.06414 | opp_overlap 3041274 3041297, overlap 3041300 CCCACGCCGTGAAGA CCACCGG AGAA CTGGTAG TTTTTGTTAGAAAAC yqiA 3042235 - 3041654 - | putative esterase cpdA 3043062 - 3042235 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase TERM 3963 3042795 - 3042779 - G 72 -10.9 -3.08032 | overlap 3042776 GCGGGTTGAAAATCA TGGTTGC CGG GCAACCA AACGCAAGGCGCACG yqiB 3043509 - 3043087 - | putative dehydrogenase TERM 3964 3043176 - 3043186 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTGGGATAA nudF 3044138 - 3043509 - | ADP-ribose pyrophosphatase TERM 3965 3044190 - 3044210 + H 74 -9.8 -3.14234 | overlap 3044186 AATTTCAGCGACGTT TGACTGCT GTTTG AGCAGTCA TGTGTTAAATTGATG TERM 3966 3044267 - 3044291 + H 72 -9.3 -3.1236 | opp_overlap 3044251, overlap 3044265 GCCAACCTTTTGCGG TGGCGGGTTCT GCT AGAATCCGCAA TAATTTTACAATTTG tolC 3044338 - 3045819 + | transport channel TERM 3967 3045866 - 3045883 + G 72 -8.4 -3.78793 | opp_overlap 3045864 3045866 AAGGCAACGTAAAGA TGCGCC TGTTGT GGCGCA TTCTTCATCCTTCTC ygiA 3045819 - 3046076 + | hypothetical protein ygiB 3046060 - 3046635 + | conserved hypothetical protein; putative outer membrane protein TERM 3968 3046706 - 3046744 + G 71 -10.5 -2.93252 | gap 1, overlap 3046703 TGAATACGGTTTTAA TTTTCACACCATGTATGG TGAA CCTTAC-TGGTGTGAAGA TGCTTATTACAAACT ygiC 3046641 - 3047801 + | putative enzyme TERM 3969 3047852 - 3047876 + F 91 -12.9 -2.7535 | opp_overlap 3047853, overlap 3047849 AAGTATGAAGACCAA AGTTGCCCTGA TTA TCAGGGCAACG TCATATATTGCAGAA TERM 3970 3047875 - 3047853 - f 100 -16.4 -3.95424 | opp_overlap 3047852 3047849 AGTATGAAGACCAAA GTTGCCCTGA TTA TCAGGGCAAC GTCATATATTGCAGA TERM 3971 3048220 - 3048202 - f 88 -3.2 -5.89827 | opp_overlap 3048202 AACCATTAAAAAAAA GAAAAG AGTATTG CTTTTC ATTATAAACACTCAT TERM 3972 3048678 - 3048668 - g 86 -6.8 -4.89521 | AGAGTGGAAAGAAAA TGGC AAA GCCA TGAAAGATGATTATG assT 3048324 - 3050120 + | arylsulfate sulfotransferase dsbA 3050136 - 3050804 + | Thiol:disulfide interchange protein dsbA precursor EFER_2982 3050819 - 3051490 + | putative protein-disulfide oxidoreductase TERM 3973 3051524 - 3051501 - T 100 -16.8 -3.81027 | opp_overlap 3051501 GGTAAGTAATGCAAA CCGAAGCCAG GCTT CTGGCTTCGG TTTTATTCATTGCTT TERM 3974 3051501 - 3051524 + T 100 -16.8 -4.81082 | opp_overlap 3051501 GGTAAGTAATGCAAA CCGAAGCCAG GCTT CTGGCTTCGG TTTTATTCATTGCTT zupT 3052416 - 3051538 - | putative dioxygenase TERM 3975 3052501 - 3052512 + G 70 -5.8 -4.17132 | overlap 3052495 3052503 3052506 CTGACCTTACTGGCG GGTG CCGC CACC TTTATTGGCGCATTT ygiE 3052468 - 3053241 + | zinc transporter TERM 3976 3053294 - 3053245 - T 100 -13 -3.39844 | overlap 3053243 3053248 3053252 GGCATAGGTTAAACA CCACAGATGCAGATGTTGCCCA GTCCAG TGGGCAACATCTGAATATGAAG ACAGAAATGTTATTA TERM 3977 3053291 - 3053248 - T 100 -15.5 -2.85565 | overlap 3053245 3053243 3053252 ATAGGTTAAACACCA CAGATGCAGATGTTGCCCA GTCCAG TGGGCAACATCTGAATATG AAGACAGAAATGTTA TERM 3978 3053287 - 3053252 - T 100 -14.9 -3.0362 | overlap 3053248 3053245 3053243 GTTAAACACCACAGA TGCAGATGTTGCCCA GTCCAG TGGGCAACATCTGAA TATGAAGACAGAAAT EFER_2985 3053489 - 3053307 - | hypothetical protein TERM 3979 3053924 - 3053885 - H 73 -9.7 -3.05914 | opp_overlap 3053886 ATTTAATCATATACA GCTTAAATATAATTTAA GTTTTT CTAAATTACATTTAAGC AAAAATAACAAGCCA TERM 3980 3053886 - 3053902 + H 86 -6.7 -4.91712 | opp_overlap 3053885 TTTAATCATATACAG CTTAAAT ATA ATTTAAG TTTTTCTAAATTACA ygiL 3054045 - 3054608 + | putative fimbrial-like adhesin protein TERM 3981 3054664 - 3054645 - f 91 -12.2 -3.5627 | opp_overlap 3054643 ACACCAGGCGGTAAA GCCGATGA AATT TCATCGGC AACTTTGGGTCTTTT TERM 3982 3054883 - 3054872 - g 79 -2.2 -5.24129 | CGTTTTGAGAAAAAA GGCT ACAT AACC CCAGGTAAATATCTG TERM 3983 3054988 - 3054959 - g 74 -7.4 -4.09685 | gap 1, opp_overlap 3054959 CTGGAGTGGGTAAAA GCAGA-TAATGAA AGCGG TTCATTACTCTGC TTAACTAGAGAAAAT TERM 3984 3056336 - 3056314 - g 76 -3.5 -4.90869 | overlap 3056308 ATCAGTAAGCAAAAA CTTTGATAT TGGCG ATTTCAAAG GCATTTCCGCATCGC yqiG 3054695 - 3057217 + | putative outer membrane usher protein yqiH 3057224 - 3057973 + | putative periplasmic pilin chaperone EFER_2989 3057970 - 3059013 + | conserved hypothetical protein; putative exported protein TERM 3985 3059059 - 3059004 - T 71 -4.2 -4.87389 | gap 1, opp_overlap 3059018 3059023, overlap 3059010 3059023 CATCGTAAAAATAAA CTATAACTAAACAGCAAAATGCCGGGA ACA CCCCGGCATTTTCATATTTAGT-ATTT CACGTCATTAGCTGG TERM 3986 3059054 - 3059010 - T 100 -14.5 -3.76008 | opp_overlap 3059018 3059023, overlap 3059004 3059023 AAAAATAAACTATAA CTAAACAGCAAAATGCCGGGA ACA CCCCGGCATTTTCATATTTAG TATTTCACGTCATTA TERM 3987 3059018 - 3059046 + T 83 -11.8 -2.74755 | opp_overlap 3059010 3059004 3059023, overlap 3059023 ACTATAACTAAACAG CAAAATGCCGGG AACAC CCCGGCATTTTC ATATTTAGTATTTCA TERM 3988 3059023 - 3059041 + T 100 -11.7 -4.51363 | opp_overlap 3059023 3059010 3059004, overlap 3059018 AACTAAACAGCAAAA TGCCGGG AACAC CCCGGCA TTTTCATATTTAGTA TERM 3989 3059041 - 3059023 - T 100 -12.4 -4.52266 | opp_overlap 3059018 3059023, overlap 3059010 3059004 AACTAAACAGCAAAA TGCCGGGA ACA CCCCGGCA TTTTCATATTTAGTA ribB 3059720 - 3059067 - | 3,4-dihydroxy-2-butanone-4-phosphate synthase TERM 3990 3059435 - 3059463 + g 78 -8.1 -4.41206 | opp_overlap 3059440 CTTCAATGGTCACGG TAAAACCTGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT TERM 3991 3060002 - 3059988 - H 71 -8.6 -3.45023 | GCAGGATCACTATAA CGCTAA TGA TTAGCG GCGGCAACGCGCAGG yqiC 3060036 - 3060392 + | hypothetical protein TERM 3992 3060488 - 3060458 - T 83 -9.1 -4.22407 | gap 2 GATGAAAACGATAAA TGCCGGA--GAGGAG TTT CCCCTCAATCCGGCA AAAATAGTTCGTTCG glgS 3060768 - 3060562 - | Glycogen synthesis protein glgS yqiJ 3061019 - 3061648 + | Inner membrane protein yqiJ TERM 3993 3062981 - 3062969 - g 71 -9.1 -3.50853 | CTGGCGGAAGCAGAA GCGCA ACG TGCGC TGAACGATGCTATCA yqiK 3061679 - 3063340 + | hypothetical protein TERM 3994 3063358 - 3063380 + F 100 -8.4 -5.4251 | opp_overlap 3063358 3063356 TTTCAACTATGAACA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 3995 3063559 - 3063540 - f 90 -11.4 -3.71649 | opp_overlap 3063539 3063540, overlap 3063523 3063533 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTGTATAAGGAAAG TERM 3996 3063540 - 3063559 + F 71 -10 -2.68823 | gap 1, opp_overlap 3063523 3063533 3063540, overlap 3063539 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC CTTGTATAAGGAAAG TERM 3997 3063670 - 3063649 - f 72 -10.1 -2.79248 | opp_overlap 3063649 3063649, overlap 3063651 ATTAACAGCCAATCA GAGGGGGGA GAAA TCCTCCCTC ACCCTTGCTCCTTTA TERM 3998 3063734 - 3063756 + G 100 -8.4 -5.4251 | TTTCTCTATCCCACA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCA TERM 3999 3063935 - 3063916 - g 88 -11.4 -3.71649 | opp_overlap 3063915 3063916, overlap 3063899 3063909 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTGTATAAGGAAAG EFER_2995 3063675 - 3063944 + | hypothetical protein TERM 4000 3064110 - 3064132 + T 100 -8.4 -5.4251 | opp_overlap 3064108 3064106 3064110 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4001 3064311 - 3064292 - T 90 -11.4 -3.71649 | opp_overlap 3064292 3064291, overlap 3064275 3064285 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG TERM 4002 3064292 - 3064311 + T 71 -10 -2.57132 | gap 1, opp_overlap 3064275 3064285 3064292, overlap 3064291 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC CTTATAGAAGGAAAG rfaE 3065943 - 3064510 - | fused heptose 7-phosphate kinase ; heptose 1-phosphate adenyltransferase glnE 3068831 - 3065991 - | fused deadenylyltransferase ; adenylyltransferase for glutamine synthetase TERM 4003 3068006 - 3067989 - G 70 -4 -4.65263 | ACGGCGGAAAACAAA CGGGCG CAGCAT CGCACG CAACTCGTTAGCATA TERM 4004 3068195 - 3068182 - G 71 -2.3 -4.99645 | opp_overlap 3068182 3068189 ACGCGATAAACAAAA CCATC CTGC GTTGG TTGATCCAGCACTTT TERM 4005 3068318 - 3068303 - G 77 -6.2 -4.65895 | CCGGCCAGGCAAAAA TCAGAT CGAT ATCTGA GGAAAAATTCAGCTC ygiF 3070155 - 3068854 - | putative adenylate cyclase TERM 4006 3069210 - 3069184 - G 72 -5 -4.65895 | opp_overlap 3069184, overlap 3069185 TTTGGCATCTAAAAA CGGCTGCCAGGC TTT GCTTACCAGCCA TTCGGTCAACGCCAG EFER_2999 3070378 - 3070172 - | hypothetical protein htrG 3070397 - 3071017 + | putative signal transduction protein (SH3 domain) TERM 4007 3071187 - 3071214 + G 84 -7.6 -4.62102 | overlap 3071188 CACAGGAGATGCTCG ACGCGGGTTACC AGCA GGTAGGCCGCGA TTTTCCTGTTTTTCT TERM 4008 3071188 - 3071213 + G 76 -11.1 -3.34821 | overlap 3071187 ACAGGAGATGCTCGA CGCGGGTTACC AGCA GGTAGGCCGCG ATTTTCCTGTTTTTC TERM 4009 3071285 - 3071299 + G 77 -10 -3.70149 | opp_overlap 3071273 3071279 GAACGGAAATCCGGT TCCGGT TAC ACCGGA TTTACCTGCTATGCC TERM 4010 3071489 - 3071499 + G 78 -8.2 -4.2679 | overlap 3071488 3071489 CCGTTACGTGTACTG CGCG TGG CGCG TTTTGCTGCGCGTTA TERM 4011 3071681 - 3071693 + G 72 -4.7 -4.63218 | overlap 3071678 3071682 GTACTGCACGATTGC GGCGC ACT GCGCG TTTTATTCCCGGAAA cca 3071081 - 3072319 + | fused tRNA nucleotidyl transferase ; 2'3'-cyclic phosphodiesterase and 2'nucleotidase and phosphatase TERM 4012 3072353 - 3072391 + T 79 -11.1 -3.18264 | gap 1, opp_overlap 3072348 3072365 3072374, overlap 3072355 ATTGCAGACACCGGC CAG-GTCGGATAAGACGC ACAA GCGTCATATCCGACACTA TTCCTCAATCAAAAG TERM 4013 3072355 - 3072389 + T 100 -13.7 -3.1552 | gap 1, opp_overlap 3072348 3072365 3072374, overlap 3072353 TGCAGACACCGGCCA G-GTCGGATAAGACGC ACAA GCGTCATATCCGACAC TATTCCTCAATCAAA bacA 3073221 - 3072400 - | undecaprenyl pyrophosphate phosphatase TERM 4014 3072923 - 3072904 - G 72 -7.8 -3.97709 | overlap 3072905 ATCATGGAATAACAA CCCCAGCA CCAC TGCCGGGA TCATGCCAAGCAGAA folB 3073680 - 3073312 - | bifunctioal dihydroneopterin aldolase ; dihydroneopterin triphosphate 2'-epimerase plsY 3073786 - 3074403 + | 1-acyl glycerol-3-phosphate synthetase component TERM 4015 3074444 - 3074406 - T 73 -5.4 -4.65078 | opp_overlap 3074406, overlap 3074408 AGATCCTGAATAAAA TCTTTCAGCCTGCG TTTATTCTTTT CACAGGCTGAAACA TGCTTTACGCGGCCG gcp 3075462 - 3074449 - | O-sialoglycoprotein endopeptidase TERM 4016 3074901 - 3074881 - G 76 -8.1 -4.1891 | opp_overlap 3074886 3074887, overlap 3074877 GCGCGGGAAGACAAA GCGCCCGGC GGT GCCCTGCGC AGCCATTTTCGACAG TERM 4017 3075381 - 3075396 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 4018 3075667 - 3075650 - H 77 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3075700 - 3075915 + | 30S ribosomal subunit protein S21 TERM 4019 3075960 - 3075993 + F 86 -7.6 -4.62475 | overlap 3075964 ACTGAGTAGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 4020 3075964 - 3075990 + F 100 -10.9 -4.40882 | gap 1, overlap 3075960 AGTAGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 4021 3076477 - 3076462 - g 70 -3.9 -4.60487 | CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCCCGCT dnaG 3076027 - 3077772 + | DNA primase TERM 4022 3078740 - 3078720 - g 73 -9.1 -3.60948 | overlap 3078738 GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTACCG rpoD 3077967 - 3079808 + | RNA polymerase, sigma 70 (sigma D) factor TERM 4023 3079827 - 3079844 + F 100 -8.4 -5.4505 | opp_overlap 3079827 TAAAGATATGCATAA GCCCTC CCTCGT GAGGGC TTTTTTATTAAGGAA TERM 4024 3079844 - 3079827 - f 71 -8.4 -3.43654 | opp_overlap 3079827 TAAAGATATGCATAA GCCCTC CCTCGT GAGGGC TTTTTTATTAAGGAA TERM 4025 3080122 - 3080100 - g 70 -5.5 -4.39287 | gap 1, overlap 3080112 TTAATGACAGTAAAA CGCTTGCCAG AATT CTGGCG-GCG GCGACCCCGGCAGAA EFER_3009 3079868 - 3080431 + | hypothetical protein ygjF 3080994 - 3080488 - | G/U mismatch-specific DNA glycosylase TERM 4026 3080899 - 3080927 + g 70 -10.3 -3.15663 | opp_overlap 3080910 GAACCGGTTCGCCGG GTGAGCAAAAGGG AAC CCCTTTTCCGCAC TTGATAACCCTGGAT TERM 4027 3081243 - 3081218 - R 72 -6.1 -4.32035 | opp_overlap 3081222, overlap 3081215 3081222 AAAAAAATCAAATAA TTAAGCCACTC GATC GAGTGGCTTTT TTTGTACGAATGGCA TERM 4028 3081239 - 3081222 - R 90 -11.3 -3.66349 | opp_overlap 3081222, overlap 3081218 3081215 AAATCAAATAATTAA GCCACTC GATC GAGTGGC TTTTTTTGTACGAAT TERM 4029 3081222 - 3081239 + r 100 -11.3 -5.61596 | opp_overlap 3081222 3081218 3081215 AAATCAAATAATTAA GCCACTC GATC GAGTGGC TTTTTTTGTACGAAT EFER_3011 3083278 - 3081311 - | putative Selenocysteine-specific elongation factor (SelB translation factor) TERM 4030 3082148 - 3082135 - GR 79 -4.5 -5.00616 | gap 1 TCTGTCCCCAAAAAA CCG-GC AGC GCACGG GAAAGTTGTAAGCGC TERM 4031 3082229 - 3082240 + gr 81 -4.4 -5.14965 | CCCTAGCGCCACTTC CAGT TCAC ACTG TTTTTTCATGCCGCT EFER_3012 3083627 - 3083232 - | Putative GrdX protein TERM 4032 3083319 - 3083297 - GR 78 -9.2 -3.59895 | overlap 3083287 3083309 ACAAATTCAAATCAA TGAGCTGAAA ATC TTGCAGCTCA GCTTCACGCCATTTC TERM 4033 3083646 - 3083667 + r 100 -15.9 -2.90075 | ATCCTGCTGTCAGTA TCGCCAGCC TTAC GGCTGGCGA TCTGGTTAAAACACC EFER_3013 3083897 - 3083673 - | Glycine reductase complex component B gamma subunit (Selenoprotein PB gamma) (fragment) EFER_3014 3084971 - 3083925 - | Glycine reductase complex component B gamma subunit (Selenoprotein PB gamma) TERM 4034 3084362 - 3084379 + g 79 -4.1 -5.08824 | TCGGATATTCTGTTT TGAAAGG CTCG CCCTTCA TTTTTTGCATCAACA EFER_3015 3086274 - 3084985 - | Glycine reductase complex component B alpha and beta subunits (Selenoprotein PB alpha/beta) [Contains: Betaine reductase component B beta chain; Betaine reductase component B alpha chain] EFER_3016 3087547 - 3086285 - | Glycine/sarcosine/betaine reductase complex component C alpha subunit TERM 4035 3086989 - 3087002 + gr 86 -8.1 -4.59773 | opp_overlap 3086998, overlap 3086980 CTTCTGCCATCGCCA CGCCA GCAA TGGCG TTTTTCACCATCGCC EFER_3017 3088964 - 3087405 - | Glycine/sarcosine/betaine reductase complex component C beta subunit TERM 4036 3088342 - 3088358 + gr 70 -8 -3.73072 | opp_overlap 3088342 GAGATATGCCAACCA GCCAGT ACTGC ACTGGC TTTAGTGACCAAATT TERM 4037 3088711 - 3088727 + gr 71 -8.7 -3.2963 | ACGTTGAGCCAGGGT CTGGGGA GCG TCTCCAG TTCTGCAGGGCTGAT TERM 4038 3088821 - 3088836 + gr 71 -2.4 -4.9725 | GGGTATCTCCGAAAG CCAGGG TTCA TCCGGG TTTTTATGTCGGGCT TERM 4039 3088869 - 3088859 - GR 70 -6.8 -4.07568 | opp_overlap 3088859 GTCGGGCTTGCAAAA TGGC GGA GCCA TGCCATTTCAGCAAA TERM 4040 3088953 - 3088979 + gr 75 -10.2 -2.75992 | gap 1, opp_overlap 3088969, overlap 3088972 AATTCCTCCCGAAGT GG-TCTCCGGC ACTGAA GCCGGAGAGCC TCCTGTTAACTCAGG EFER_3018 3089314 - 3088985 - | Putative selenoprotein A of glycine-reductase EFER_3019 3089458 - 3089330 - | Glycine/sarcosine/betaine reductase complex component A (Selenoprotein PA) (Thioredoxin reductase complex selenoprotein A) (fragment) TERM 4041 3089409 - 3089436 + g 93 -2.6 -5.68023 | opp_overlap 3089415, overlap 3089410 3089413 ATTGCCGGGCCGGGG ACACCATCCCTG TCAC CAAGGATGATGA TTTTTTTACTTCTGA EFER_3020 3089808 - 3089485 - | Putative thioredoxin (TRX) EFER_3021 3091100 - 3089805 - | Putative Thioredoxin-disulfide reductase TERM 4042 3090625 - 3090613 - G 71 -3.3 -4.83169 | overlap 3090614 AGTTCGGTATAAAAA TCTGC ATC GCAGG TAGCGCAATAAGAAA TERM 4043 3090654 - 3090641 - G 74 -5.9 -4.45738 | overlap 3090642 TAGCGCAATAAGAAA CGCCG CGTC CGGCA AACTCTTTTTCACCA yqjH 3092706 - 3091927 - | putative siderophore interacting protein TERM 4044 3093551 - 3093536 - g 100 -3.3 -5.63517 | TGCGGAAATAAAAAA GATCA TTGCAG TGATC GACCGCGCCGCTTTT yqjI 3092961 - 3093587 + | putative transcriptional regulator TERM 4045 3093591 - 3093614 + T 70 -9.6 -2.89191 | opp_overlap 3093588, overlap 3093595 CAGCTGGATTAATCG CCAATTGCCG GATA CGGCAATTGC TCTATCCGGCTATAC TERM 4046 3093595 - 3093610 + T 71 -9 -3.322 | opp_overlap 3093588, overlap 3093591 TGGATTAATCGCCAA TTGCCG GATA CGGCAA TTGCTCTATCCGGCT TERM 4047 3093677 - 3093706 + T 78 -9.9 -3.57144 | opp_overlap 3093666, overlap 3093679 TTAATGTAACACTGT TACCGCGTCGGCC AGCC GACTGGCGCGGTG TTTCACCATCGCCGA TERM 4048 3093679 - 3093704 + T 78 -10.3 -3.36515 | opp_overlap 3093666, overlap 3093677 AATGTAACACTGTTA CCGCGTCGGCC AGCC GACTGGCGCGG TGTTTCACCATCGCC aer 3095182 - 3093662 - | fused signal transducer for aerotaxis sensory component ; methyl accepting chemotaxis component TERM 4049 3094653 - 3094640 - G 75 -6.7 -4.3208 | TGGCACAACGGAAAA GTGCA GCAT TGCAC AAAGGGCAATAAACA ygjG 3095512 - 3096918 + | putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent TERM 4050 3096961 - 3096928 - f 76 -11.1 -2.57985 | opp_overlap 3096928, overlap 3096924 GCATAATTCAACCCA TTATCGGGCCAGA ACTTATCA CCCGGCCCGATAA TTCTCCCCCAGCCCT TERM 4051 3097097 - 3097110 + G 100 -3.1 -5.63517 | gap 1, opp_overlap 3097089 3097109, overlap 3097082 3097105 TATGAATCAGGTGCA GC-CTG GTA CAGAGC TTTTTTCTTTGAAGA TERM 4052 3097558 - 3097578 + G 72 -7.5 -3.86194 | GTAATGAGTACGTTA TCGCCGGTT TGC ATCTGGCGA TTTCTGCCAGCGATT TERM 4053 3098236 - 3098250 + G 72 -7.8 -3.87925 | overlap 3098237 GCGTGCGGCAACTTT TTCGCC AGC GGCGAG TTGTGTTTACTCATT EFER_3026 3097083 - 3098267 + | hypothetical protein EFER_3027 3099301 - 3098261 - | hypothetical protein TERM 4054 3099540 - 3099519 - R 100 -7.3 -5.626 | opp_overlap 3099519 GAGCGTATAAAAAAA CCTTCGCTA TATT CAGCAAAGG TTTCATATGGTCTGA uxuR 3100335 - 3099562 - | DNA-binding transcriptional repressor TERM 4055 3100559 - 3100528 - R 100 -13.2 -4.208 | CCCCAAAATGAGAAA CTGGTCAACCAAAT CTTC ATTTGATCGACCAG TGAGGGTGAAGGGTT uxuB 3102046 - 3100580 - | D-mannonate oxidoreductase, NAD-binding TERM 4056 3101780 - 3101794 + g 72 -4.9 -4.62336 | overlap 3101756 AATAATTTTCAGCTC GGTGC TTTCT GCGCC TTTTTCCGCTACGGT TERM 4057 3101813 - 3101824 + g 86 -5.8 -5.15117 | TTCCGCTACGGTGTA CAGC AGAT GCTG TTTTTTCAGGTTTTC TERM 4058 3102120 - 3102096 - R 100 -15 -3.58329 | opp_overlap 3102092, overlap 3102092 GCAAGGAAGAAGGAA CCGGCACGGC GCGCA GCCATGCCGG TGGATATTAACGGCT uxuA 3103311 - 3102127 - | mannonate hydrolase TERM 4059 3103582 - 3103598 + H 75 -3 -5.1356 | overlap 3103579 ATGGCAGTTTCCCAG GATACA AACCC TGTGTC TTTTTATTCATGACA slp 3103820 - 3104386 + | outer membrane lipoprotein TERM 4060 3104667 - 3104688 + F 100 -13.1 -4.66163 | opp_overlap 3104667 TGTCATTAGACTCAA CGGATACCT CATC AGGTATCCG TTTTTAGATAAAAAT TERM 4061 3104688 - 3104667 - f 95 -13.1 -3.14468 | opp_overlap 3104667 TGTCATTAGACTCAA CGGATACCT CATC AGGTATCCG TTTTTAGATAAAAAT dctR 3104745 - 3105308 + | Putative HTH-type transcriptional regulator dctR, Probable repressor of dctA dicarboxylate transporter gene TERM 4062 3105336 - 3105315 - T 100 -11.5 -5.81412 | CTTATTTAAAAAAAA GGGAGTGGC CTAT GCCACGCCC AAATCATTAACTTCA yhiD 3106041 - 3105382 - | hypothetical protein TERM 4063 3106130 - 3106108 - R 77 -4.8 -5.05153 | opp_overlap 3106096 AGCCCAAAAAAGAAA CTGCCCGC GCTGATG ACAGGCAG TGACTTTTCTGGTGG hdeB 3106562 - 3106152 - | Protein hdeB precursor (10K-L protein) Periplasmic protein, repressed by H-NS TERM 4064 3106464 - 3106448 - G 70 -4.3 -4.45544 | overlap 3106442 3106449 3106451 CTGCACCAAGGAAAA CCAGCGT TTT ACGCAGA GACAGACTTTTCATA hdeA 3106963 - 3106580 - | stress response protein, acid-resistance protein TERM 4065 3106762 - 3106749 - G 72 -6.7 -4.25283 | AGCGCTTCAGCAAAA CCAAC AGCA GTTGG TTGGAAAGTAGCATC hdeD 3107165 - 3107734 + | Putative membrane transporter, H-NS repressed HdeD protein TERM 4066 3107781 - 3107809 + F 100 -14.7 -3.15758 | overlap 3107771 TTTTTTCATTTTTAA GCTCATGGTCACG CTA TGTGACTATGAGC TTACTGAAACATTAT TERM 4067 3108129 - 3108108 - f 100 -10.2 -5.56568 | ATATTATGAAAAAAA GCTGGCAA TCCTGT TTGCCAGC CAAAAATAAAAAAGG gadE 3108502 - 3109029 + | Transcriptional regulator gadE mdtE 3109149 - 3110438 + | multidrug resistance efflux transporter TERM 4068 3110590 - 3110551 - g 72 -11.4 -2.52635 | overlap 3110550 ATCGCCATTATGAAC TTGCCGGTGGCGCAATAT CCGC AGATTGCGCCGCCGACGA TCACTGTCAGCGCAA mdtF 3110464 - 3113577 + | multidrug transporter, RpoS-dependent TERM 4069 3113599 - 3113622 + T 86 -6.6 -5.06414 | overlap 3113603 ACGAGTAGCGTTACT GCAAGGCCGG GAAA CCGGCCTTAA TTTTTGTTAACGACC TERM 4070 3113603 - 3113618 + T 100 -11.8 -3.9407 | overlap 3113599 GTAGCGTTACTGCAA GGCCGG GAAA CCGGCC TTAATTTTTGTTAAC EFER_3040 3113783 - 3113619 - | hypothetical protein; putative exported protein gadW 3114540 - 3113803 - | gadW HTH-type(AraC-type) transcriptional positive regulator of gadA and gadBC, in absence of gadX; repressor of gadX TERM 4071 3114867 - 3114885 + H 95 -5.2 -5.81412 | GCAGACTATCCTCTT CCCGGT CCCCTAT GCCGGG TTTTTTTTGCCTGAA EFER_3042 3115205 - 3116074 + | HTH-type transcriptional regulator gadX for glutamic acid decarboylase and transporter (gadA, gad BC) (AraC/XylS family) (modular protein) EFER_3043 3116107 - 3117393 + | Periplasmic appA protein precursor [Includes: Phosphoanhydride phosphohydrolase (pH 2.5 acid phosphatase) (AP); 4-phytase] EFER_3044 3117514 - 3117807 + | hypothetical protein; putative exported protein TERM 4072 3117898 - 3117883 - f 70 -2.5 -5.04987 | AACACCTGCAAAAAA TCAGG TATTTC CCCGA TAGATTTCCCTAAAA EFER_3045 3118010 - 3118195 + | hypothetical protein TERM 4073 3118322 - 3118333 + F 75 -7.2 -4.31692 | CACTCTATACCATTA CGCC AAAA GGCG TTTTACTGGTAAATT EFER_3046 3118375 - 3118545 + | hypothetical protein TERM 4074 3118578 - 3118553 - f 70 -7.6 -3.72324 | overlap 3118538 CAGCCTGATCAATAA GGCCGGAA ATTCCCCCTA TTCCGGCC TCCCCACACCCTCAC EFER_3047 3118932 - 3119369 + | hypothetical protein yhaM 3120900 - 3119515 - | hypothetical protein TERM 4075 3121077 - 3121056 - R 100 -7.9 -6.17268 | TCACAATAAAAAAAA TGGGCGAAG TTAA CCACGCCCA GAGGATGAAAAAGAG tdcC 3122446 - 3121115 - | L-threonine/L-serine transporter TERM 4076 3122046 - 3122031 - G 78 -7.5 -4.39828 | overlap 3122021 3122020 AACAGCGCGACAAAA CCGCG GTTAAG CGCGG GCAGATGCAGTTGGT tdcB 3123457 - 3122468 - | catabolic threonine dehydratase, PLP-dependent TERM 4077 3122811 - 3122801 - G 74 -3.2 -5.00884 | ATTTCCGGCAAAAAA TGAC GCC GCCA TGCCGTGAACATTTT TERM 4078 3123213 - 3123234 + g 79 -2.1 -5.28176 | opp_overlap 3123218, overlap 3123218 GCATGATTCCCGGCA GAGCAGGCG ACAA CGCCTTTAC TTTTTTCTGCATCCG TERM 4079 3123218 - 3123229 + g 77 -7.2 -4.47686 | opp_overlap 3123218, overlap 3123213 ATTCCCGGCAGAGCA GGCG ACAA CGCC TTTACTTTTTTCTGC TERM 4080 3124073 - 3124085 + H 75 -10.5 -2.79327 | overlap 3124072 CATTGTTAAGATTCA GGCGG TAA CCGCC ATTTACGTCAGATCA TERM 4081 3124526 - 3124515 - g 85 -3 -5.43553 | overlap 3124523 ATGGAAAAAAGAAAA TGTA TGAA TACA TGGCGGAATTTAAGC TERM 4082 3124718 - 3124696 - g 70 -4 -4.69664 | opp_overlap 3124703 GATAGCACTTAAAAA CCGCGAACGC CGG GCACTGGCAG ACTTTTATCATCTTG yjiM 3124175 - 3125326 + | putative 2-hydroxyglutaryl-CoA dehydratase (hgdB-like) TERM 4083 3125398 - 3125415 + GF 77 -6.9 -4.52589 | GATCTTACTGGCAGA CGGCGTG ATTA TGCGCCG TTTTCTCTGCCCGAC hgdC 3125330 - 3126103 + | ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase EFER_3053 3125977 - 3126354 + | hypothetical protein TERM 4084 3126368 - 3126389 + F 100 -11.6 -5.09225 | GAGTATTATTCTTCT GCGTGCTG TACATT CAGCACGC TTTTTTGAATCCCAT TERM 4085 3127117 - 3127128 + G 72 -5.8 -4.38273 | GCGGTGCGCGAGCGC GTCG GTAA CGAC TTTATTATCATCTAT TERM 4086 3127638 - 3127628 - g 72 -5.4 -4.54727 | CCGTGCAAATCAAAA CACT GGC AGTG GTCGGTGCCGGTCCG TERM 4087 3127644 - 3127665 + G 79 -10.1 -3.83026 | ACTGGCAGTGGTCGG TGCCGGTCC GGCC GGGCTGGCA TTTGCTATCAACGCA TERM 4088 3128404 - 3128450 + G 90 -14.6 -2.62983 | gap 2, opp_overlap 3128391, overlap 3128406 AACCGCGCCCTGGCA CAGCCACTGATC-GACGC-CGG AAAAA CCGTGCATCTGATCGGTGGCTG TGATGTGGCGATGGA TERM 4089 3128406 - 3128448 + G 75 -11.4 -2.85668 | gap 2, overlap 3128404 CCGCGCCCTGGCACA GCCACTGATC-GACGC-CGG AAAAA CCGTGCATCTGATCGGTGGC TGTGATGTGGCGATG fadH 3126502 - 3128520 + | 2,4-dienoyl-CoA reductase, NADH and FMN-linked TERM 4090 3128508 - 3128530 + TF 83 -9.2 -4.07568 | GGGGACAAAACTGGC GCTGGAGA TTTAATC TCTCCAGC TTTTAAGCAAAACCG TERM 4091 3128563 - 3128543 - Tf 100 -11.9 -4.41047 | AGCTTTTAAGCAAAA CCGGATGAA GCA CTCATCCGG CGAGACTACTGACAA tsr 3130513 - 3128702 - | methyl-accepting chemotaxis protein I, serine sensor receptor TERM 4092 3129267 - 3129285 + gF 70 -5.2 -4.37886 | opp_overlap 3129268, overlap 3129268 GCAATACCGTCAATT ACGCTGAT AAT ATCGGCGA TTTTCTGCGAACTGG TERM 4093 3131137 - 3131157 + Gr 73 -8.9 -3.42069 | opp_overlap 3131127 CGAAAGTGCGGCAAT CGCCCGTCA GTA TGGCGCGCG TGTTATTGCCATTAC TERM 4094 3131347 - 3131324 - gR 100 -12.4 -4.46233 | overlap 3131325 3131339 GCAATGGCAAATAAA GCGCAGGCGA AAGA TCGCCTGCGG CGGATAAAACTGGTG TERM 4095 3131346 - 3131325 - gR 100 -15.9 -3.27017 | overlap 3131324 3131339 CAATGGCAAATAAAG CGCAGGCGA AAGA TCGCCTGCG GCGGATAAAACTGGT TERM 4096 3131384 - 3131411 + Gr 74 -10.6 -2.66979 | overlap 3131383 AGCCACCGTGGGGGC GCTAACCGCCAG CCAC TTGGCGATTAGC ATTGTCGGTTATGCT EFER_3056 3130505 - 3131410 + | Transcriptional regulator EFER_3057 3132889 - 3131420 - | putative Na+/proline symporter TERM 4097 3132604 - 3132594 - G 70 -5.4 -4.38712 | CTCATGGTCATAAAA CGTA ATT TACG TACCGGTGCAAACAG TERM 4098 3132937 - 3132956 + r 76 -10.8 -2.54702 | GTAAGAGTTCCCGGA GTGCTGAA TGTA TTCAGCAC TCAATTGCGGTCTGT EFER_3058 3133387 - 3132992 - | conserved hypothetical protein, similar to Putative translation initiationinhibitor, yjgF family EFER_3059 3134842 - 3133391 - | D-aminoacylase (N-acyl-D-amino-acid deacylase) EFER_3060 3135025 - 3136254 + | Putative aldolase or racemase TERM 4099 3136335 - 3136314 - T 100 -14.5 -3.25223 | opp_overlap 3136308 TATTTAGAGGATCAA TCCCGGAGA GATA TCTCCGGGA TACCGCTCTTACGCT hpaR 3136784 - 3136344 - | 4-hydroxyphenylacetate degradative operon repressor hpaG 3137055 - 3138350 + | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase hpaE 3138347 - 3139813 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase TERM 4100 3139906 - 3139889 - g 72 -4.7 -4.68994 | ACTACCAGGGAAAAA CCACGGC TGTC GCCAGGG CGCGATCGACGGGCA TERM 4101 3140353 - 3140372 + G 82 -9.2 -4.16842 | overlap 3140335 TGGCGGTCCTTGCCA GCGGTTCG TTAT CGCACCGC TTTATTGACGATCAG hpaD 3139815 - 3140666 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase (Homoprotocatechuate 2,3-dioxygenase) hpaF 3140676 - 3141056 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 4102 3141201 - 3141181 - gf 80 -5.4 -4.88736 | gap 1, overlap 3141183 3141192 GATCAGGCAGAAAAA CAGCGCGAA CAGA TCCGCGC-G ATCTCCCTCGATTAC TERM 4103 3141200 - 3141183 - gf 81 -9.1 -4.06182 | overlap 3141181 3141192 TCAGGCAGAAAAACA GCGCGAA CAGA TCCGCGC GATCTCCCTCGATTA hpaH 3141106 - 3141927 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase hpaI 3141797 - 3142726 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 4104 3142864 - 3142851 - g 74 -2.4 -5.16841 | overlap 3142854 TTAGAGGAAGAAAAA TGAG CGACAC CTCA CCTGCCATACCGGAA EFER_3068 3142850 - 3144226 + | putative 4-hydroxyphenylacetate permease hpaX TERM 4105 3144323 - 3144337 + G 86 -7 -5.00884 | overlap 3144325 3144330 CATTATCAGTCGTTC GCCCGC ATG GCGGCC TTTTTTGGCCGCCAT TERM 4106 3144330 - 3144351 + G 81 -13 -2.78816 | overlap 3144325 3144323 AGTCGTTCGCCCGCA TGGCGGCC TTTTTT GGCCGCCA TATGCTGCCACATCG hpaA 3144236 - 3145126 + | Regulator of the 4HPA-hydroxylase operon TERM 4107 3145169 - 3145196 + F 100 -14.2 -3.06796 | overlap 3145145 GGCACCACCTGCTAT TCCCCTTTCTCC GCCT GGAGCAAGGGGA TTGAGTAACGTCAAA TERM 4108 3145226 - 3145214 - f 86 -7.7 -4.67904 | GAGTAACGTCAAAAA TCGCT AAA AGCGA CCTCGATCACAAAAC hpaB 3145377 - 3146939 + | 4-hydroxyphenylacetate 3-monooxygenase large component hpaC 3146957 - 3147469 + | 4-hydroxyphenylacetate 3-monooxygenase small component, Flavin:NADH reductase TERM 4109 3147475 - 3147503 + F 100 -9.6 -5.2291 | gap 1, overlap 3147476 TGCGATTTAAGCTCC AGCCCCTTC-ACG TATT CGTCGAAGGGGCA TTTTTATTGTGATCT TERM 4110 3147476 - 3147502 + F 100 -13.1 -3.72119 | gap 1, overlap 3147475 GCGATTTAAGCTCCA GCCCCTTC-ACG TATT CGTCGAAGGGGC ATTTTTATTGTGATC EFER_3072 3147548 - 3147694 + | hypothetical protein yjiY 3147739 - 3149889 + | conserved hypothetical protein; putative inner membrane protein TERM 4111 3149899 - 3149916 + F 100 -14.1 -4.51812 | CACTAACCGTGTTTA GCCCCGC TTCG GCGGGGC TTTGTTCTTATCAGA yjiX 3149939 - 3150142 + | hypothetical protein yjiA 3150153 - 3151109 + | putative GTPase TERM 4112 3151113 - 3151145 + T 82 -3.4 -5.58179 | gap 1, opp_overlap 3151120, overlap 3151117 3151117 3151121 TTGAGGAAGTAATTT TAGATGATGGCCGCC ATGT GGCGGCC-TGAATTA TTTTTTATTCTGATC TERM 4113 3151117 - 3151142 + T 74 -4.5 -4.84921 | opp_overlap 3151120, overlap 3151113 3151117 3151121 GGAAGTAATTTTAGA TGATGGCCGCC ATGT GGCGGCCTGAA TTATTTTTTATTCTG TERM 4114 3151139 - 3151120 - T 74 -10.6 -2.64973 | opp_overlap 3151117 3151117 3151113 3151121 AGTAATTTTAGATGA TGGCCGCC ATGT GGCGGCCT GAATTATTTTTTATT TERM 4115 3151121 - 3151138 + T 95 -14.1 -2.84096 | opp_overlap 3151120, overlap 3151117 3151117 3151113 GTAATTTTAGATGAT GGCCGCC ATGT GGCGGCC TGAATTATTTTTTAT EFER_3076 3151586 - 3151143 - | hypothetical protein TERM 4116 3151410 - 3151424 + gT 70 -5.6 -4.33258 | overlap 3151411 CTGCACATCGAGTGT AGAGGG TGT CCCTCG TTTATGTTTAACCAT EFER_3077 3151746 - 3151432 - | hypothetical protein TERM 4117 3151732 - 3151763 + gr 71 -9 -3.38291 | overlap 3151735 CATAGTTGCCATCCC TAATTGTATATACA AAAA TGTATCTACAATTA TTCTGCAATTATAGC TERM 4118 3151836 - 3151870 + r 73 -8.5 -3.62775 | opp_overlap 3151835 3151834 AAGTTGATATGAAGG GGGCTGGATGGCATC ATTGG GACACCATCCAGCAC TTATTCAAACCTGAT EFER_3078 3152636 - 3151875 - | hypothetical protein TERM 4119 3152132 - 3152074 - G 75 -6.9 -4.32905 | gap 1, opp_overlap 3152091, overlap 3152091 AAAAACTGAAAATAA GCACCAAATAAAAACATTGCCAGCGCCC CTTC GAACGGTGGCATCTCTTTTATTTG-TGC CACACCTGCGGCAAA TERM 4120 3153724 - 3153709 - g 76 -7.6 -4.15044 | CCCGGCGTCAATAAA GCCATT GCTG AATGGC CGACCGGGAAAGATG TERM 4121 3154398 - 3154410 + G 81 -10.5 -3.57263 | TTCTCTTGGCGAGCA GGCGC TGG GCGCC TTTGAAGATACGCGT TERM 4122 3155065 - 3155051 - g 77 -2.7 -5.0538 | CCGGATCGCAAAAAA CGCTG GTCTT CTGCG TCACCAATGCCCATG hsdR 3152872 - 3156384 + | endonuclease R TERM 4123 3156416 - 3156438 + F 89 -12.7 -2.89569 | overlap 3156413 3156409 GCAATTTCTTCTTCT GCGGCCCGA TAAAT TTGGGCCGC TGCTTAATTTACGGA TERM 4124 3157479 - 3157490 + G 71 -2.2 -5.00616 | overlap 3157486 ACACCATTCTGCGTC TGCC GACC GGTA TTTTTTACGCGCAGG TERM 4125 3157625 - 3157611 - g 70 -10 -3.13522 | opp_overlap 3157621, overlap 3157609 ACCTGCGTACCAATA TGCCGA GCT TCGGCA AGCGCACGCCGTTTA hsdM 3156461 - 3158050 + | DNA methylase M TERM 4126 3158459 - 3158446 - g 71 -2.3 -4.96276 | ATAAAAAAAGGAAAA GGTGG TGCA CAACC TAATATTTCTCAAAC EFER_3081 3158047 - 3159555 + | Specificity determinant for hsdM and hsdR (modular protein) TERM 4127 3159569 - 3159587 + F 100 -11.7 -5.38549 | GAACATTATTTTCTG GCGCACC TTTCC GGTGCGC TTTTTATTATTTCAC yjiW 3159726 - 3160124 + | hypothetical protein mcrB 3160286 - 3161665 + | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB mcrC 3161665 - 3162711 + | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC TERM 4128 3162762 - 3162732 - T 100 -11.8 -4.53705 | overlap 3162734 AAGTTTTATAGAAAA TACCGCTCCCGACA CCA CATCGGGAGCGGCT CATCATCAGAAGGCG TERM 4129 3162760 - 3162734 - T 100 -16.6 -3.87627 | overlap 3162732 GTTTTATAGAAAATA CCGCTCCCGACA CCA CATCGGGAGCGG CTCATCATCAGAAGG EFER_3085 3169109 - 3162768 - | conserved hypothetical protein, putative DEAD-box helicase-related protein (modular protein) TERM 4130 3167447 - 3167465 + g 71 -3 -4.7657 | opp_overlap 3167442 3167449 CGGCAATAATCAACG GAGGCTGG AAA CCGTTCTC TTTTTCGACTTTTTC TERM 4131 3167552 - 3167565 + g 71 -2.3 -4.91109 | CTTTATTTTCCCATT GGACA AGTT TGCCC TTTTTGTCCTGCGCC yjgt 3172460 - 3169122 - | hypothetical protein TERM 4132 3172766 - 3172730 - R 76 -11.2 -2.64981 | gap 1, opp_overlap 3172728, overlap 3172727 3172726 AGAGTTGTAAAGTCA GTCAAAAAACACA-AGT AATC ACTGTGCGTTTTTTGAC CGTTATCGACATGAG yjiS 3173075 - 3172911 - | hypothetical protein yjiR 3173252 - 3174664 + | fused putative DNA-binding transcriptional regulator ; putative aminotransferase EFER_3089 3175828 - 3174908 - | Conserved hypothetical protein, putative transposase TERM 4133 3176157 - 3176178 + H 79 -10.9 -2.97166 | overlap 3176152 TCAGAAGGTATTTCT CTGTCTGTG TGTT CACAGGCAG TGTGGTTGATTACAT yjiO 3176307 - 3177539 + | multidrug efflux system protein TERM 4134 3177605 - 3177622 + G 80 -11.3 -3.32233 | opp_overlap 3177602, overlap 3177602 3177600 TCATCGAACTCAGAC GCGCCAA AAGG TTGGCGC TCTCTTTACTGCTTA TERM 4135 3178275 - 3178250 - g 70 -5.3 -4.36595 | CACTGAAAGCCAAAA TTCTCCCCACC GAAT GGCTGGGCGAA CATAGCGCGGAGTTG yjiN 3177580 - 3178860 + | conserved hypothetical protein; putative inner membrane protein EFER_3092 3179250 - 3179441 + | putative transposase (fragment) EFER_3093 3179454 - 3179690 + | putative transposase (fragment) EFER_3094 3181613 - 3180144 - | putative protein kinase from phage origin EFER_3095 3182209 - 3181610 - | hypothetical protein EFER_3096 3183845 - 3182160 - | putative nucleoside triphosphate hydrolase EFER_3097 3184992 - 3183835 - | hypothetical protein EFER_3098 3185870 - 3184995 - | hypothetical protein EFER_3099 3190140 - 3185854 - | hypothetical protein TERM 4136 3188342 - 3188330 - G 70 -5.5 -4.43189 | opp_overlap 3188331 AGTAATCTCACAAAA CCCGT TAC ACGAG CTAATAGCTTGATGA EFER_3100 3191438 - 3190137 - | hypothetical protein TERM 4137 3190807 - 3190823 + g 71 -9.4 -3.51924 | TTTGTCAGTTGTTTT GCGGTG ACATC CACCGC TTGTATAGGTGCCGG EFER_3101 3193015 - 3191441 - | putative restriction modification system DNA specificity domain TERM 4138 3191589 - 3191610 + g 74 -10.1 -3.56142 | CTGTTGTCGCCATCT TCCAGGGCC TGTT GGGCCTGGA TTAATTGTTGCTCAG TERM 4139 3192286 - 3192309 + g 79 -2.5 -5.31456 | opp_overlap 3192254 GGGAGGATAGTTGTT GAATTGATA TAACCT TACCAATTC TTTTTTCTGGCTTAG EFER_3102 3195159 - 3193012 - | putative type I restriction-modification system methyltransferase subunit TERM 4140 3193525 - 3193537 + g 78 -5.5 -4.87665 | GGTTGTAGGCTGCAG GCTGT AAA ACGGC TTTTTATCAGTCCCG TERM 4141 3193660 - 3193680 + g 74 -2.5 -5.14563 | opp_overlap 3193660 3193677, overlap 3193662 TACGTGGTCATACCA GGCGTTG TAGCTAT CAACGAC TTTTTTGGTCGGACG EFER_3103 3195596 - 3195210 - | hypothetical protein EFER_3104 3196936 - 3195593 - | putative 5-methylcytosine restriction system component EFER_3105 3199004 - 3196929 - | putative 5-methylcytosine-specific restriction enzyme with GTPase activity TERM 4142 3199000 - 3199010 + g 72 -5.4 -4.44819 | opp_overlap 3198998 3199000 ACACTATCTACAAGA GTCA TCG TGAC TTTTCCTCTGTTGTG EFER_3106 3200187 - 3199174 - | conserved hypothetical protein; putative exported protein, predicted restriction endonuclease EFER_3107 3199991 - 3200266 + | hypothetical protein TERM 4143 3200346 - 3200311 - fH 77 -10.4 -3.12847 | opp_overlap 3200316, overlap 3200314 AAGAAATTTATTGAA GCAGGTGCTCTTCCCC CACT GGGGAAGAGCATATGT GAATGGCGTTCTGTC TERM 4144 3200343 - 3200314 - fH 77 -10.7 -2.76456 | opp_overlap 3200316, overlap 3200311 AAATTTATTGAAGCA GGTGCTCTTCCCC CACT GGGGAAGAGCATA TGTGAATGGCGTTCT TERM 4145 3200316 - 3200341 + FH 100 -17.7 -2.9176 | opp_overlap 3200314 3200311 ATTTATTGAAGCAGG TGCTCTTCCCC CACT GGGGAAGAGCA TATGTGAATGGCGTT TERM 4146 3200708 - 3200731 + FH 71 -4.6 -4.614 | gap 1, opp_overlap 3200705 3200708 ATCACCAATAAATAA CAGTTCATGCG ACC CGCAA-AACTG TTTTATCTGCTTAAA TERM 4147 3200731 - 3200708 - fH 74 -6.8 -4.25016 | gap 1, opp_overlap 3200708, overlap 3200705 ATCACCAATAAATAA CAGTTCATGCG ACC CGCA-AAACTG TTTTATCTGCTTAAA TERM 4148 3200779 - 3200795 + FH 70 -8 -3.57792 | opp_overlap 3200781 TTGAAAGCGGCACCA GATGCG GTGTA CGCATC TTTGAACCTCGCTGA TERM 4149 3201799 - 3201814 + G 71 -9 -3.45527 | opp_overlap 3201799, overlap 3201797 3201788 TCAGGCATAAAAAAA GACCTC AATT GAGGTC TATTTACATACTTTT TERM 4150 3201814 - 3201799 - g 100 -9 -5.64274 | opp_overlap 3201799 3201797 3201788 TCAGGCATAAAAAAA GACCTC AATT GAGGTC TATTTACATACTTTT EFER_3110 3201630 - 3202034 + | hypothetical protein yjgB 3202109 - 3203128 + | putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding TERM 4151 3203136 - 3203156 + GF 100 -11.8 -4.29981 | ACTTCTGATCCCTTT GCCGGGTG CCTGT CGCCCGGC TTTTAAATCTCTTTG EFER_3112 3203134 - 3203325 + | hypothetical protein yjgR 3203258 - 3204760 + | putative ATPase yraQ 3205907 - 3204867 - | putative permease yraR 3206615 - 3205980 - | putative nucleoside-diphosphate-sugar epimerase yhbO 3206743 - 3207261 + | putative intracellular protease yhbP 3207684 - 3207241 - | hypothetical protein TERM 4152 3207523 - 3207533 + g 93 -8.2 -5.1675 | CGGCCCACTCATCTG CGCG TGA CGCG TTTTTTCCTCCGTCA yhbQ 3207735 - 3208037 + | putative endonuclease yhbS 3208527 - 3208024 - | putative acyltransferase with acyl-CoA N-acyltransferase domain yhbT 3209045 - 3208521 - | putative lipid carrier protein TERM 4153 3209660 - 3209682 + G 71 -9 -3.43676 | overlap 3209662 GCCATTTTGACGTTG CCCGCGTGGT GCT GCCGCGCGTG TTGTCGATTCATCAG TERM 4154 3209662 - 3209680 + G 72 -10.2 -3.28814 | overlap 3209660 CATTTTGACGTTGCC CGCGTGGT GCT GCCGCGCG TGTTGTCGATTCATC yhbU 3209254 - 3210249 + | peptidase (collagenase-like) TERM 4155 3211064 - 3211052 - g 78 -7.7 -4.4078 | CCGCGCTAATGAAAA TGGTG CTG CACCA CTCCCGTTGACGGCA yhbV 3210258 - 3211136 + | protease yhbW 3211217 - 3212224 + | putative enzyme EFER_3124 3212942 - 3212202 - | hypothetical protein TERM 4156 3212232 - 3212268 + gF 85 -3 -5.42259 | gap 1, opp_overlap 3212233 3212253, overlap 3212216 3212233 TGGGGTAATTTTATA ACGCCGGTTTTCAA-CA GAAA TGATTGGCAATCGGCGA TTTTTTTCGAAGTAA TERM 4157 3212332 - 3212344 + gF 78 -9.1 -3.77927 | overlap 3212330 3212333 TATTCCGGCCATGCC TGCGC CTG GCGCA TATTTTCGTCGTTCA TERM 4158 3212578 - 3212591 + gF 74 -6.7 -4.25056 | TGATAGCGGCTGTTT GGGTT AAGT AACCC TTTGTTGGTGGCATA EFER_3125 3212874 - 3213107 + | hypothetical protein TERM 4159 3213145 - 3213179 + FH 100 -13 -3.94724 | overlap 3213152 3213154 CTTTAGCCTTGTTTA TTACGCTTAGGGTAAT TAC GTTACCCGGAGCGTAA TTGTTCTGTGATTTC EFER_3126 3213257 - 3214144 + | putative triphosphoribosyl-dephospho-CoA transferase TERM 4160 3215017 - 3214999 - g 80 -5.3 -5.0133 | GACGGTTTCAAAAAA GGCAAAG TTCAT CTTTACC ATCTGTGCCTGCTTG EFER_3127 3214304 - 3215512 + | Putative carboxybiotin decarboxylase subunit of malonate decarboxylase TERM 4161 3216628 - 3216639 + G 72 -7.2 -4.25104 | TACAGCTACAGCCAG CCGG GTCT CCGG TTTTGGTGGCGCACC EFER_3128 3215525 - 3217192 + | Acetyl-S-acyl carrier protein: malonate acyl carrier protein-SH transferase EFER_3129 3217204 - 3217536 + | Malonate decarboxylase acyl carrier protein (Malonate decarboxylase delta subunit) TERM 4162 3217553 - 3217578 + GF 74 -10.3 -2.63723 | opp_overlap 3217557, overlap 3217552 CTGCGTTTTCTGGAA GCCAGTGCGCG TGAA CGCGCAGAGGC ATTAGTTGATAAAGG TERM 4163 3218146 - 3218177 + GF 80 -11.6 -2.66638 | overlap 3218145 3218148 CCTGGTCTTCCGTAC CACCGGCGGTAAAC ATAA GTATATCGTCGGTG ATTGTAACTATTTGA EFER_3130 3217391 - 3218458 + | putative subunit of malonyl-S-acyl carrier protein: biotin carboxyltransferase EFER_3131 3218458 - 3219339 + | putative subunit of malonyl-S-acyl carrier protein: biotin carboxyltransferase TERM 4164 3219399 - 3219413 + G 72 -5.6 -4.58395 | GCTGGTGCAGGCTCA GCAGGG CAT CCCTTC TTTTTCAGAGATGCC EFER_3132 3219355 - 3220455 + | putative acyl carrier protein-SH: acetate EFER_3133 3220452 - 3221138 + | Conserved hypothetical protein similar to MadK from Malonomonas rubra TERM 4165 3221290 - 3221268 - g 86 -9.2 -4.30978 | opp_overlap 3221286, overlap 3221274 3221276 TGGAAGCTATGAAAA TGAAAATGCC GGT GGCATCTCCA GAAAGTGGAGTGTTA TERM 4166 3221284 - 3221274 - g 81 -6.8 -4.70319 | overlap 3221268 3221276 CTATGAAAATGAAAA TGCC GGT GGCA TCTCCAGAAAGTGGA EFER_3134 3221159 - 3221377 + | Biotin protein MadF TERM 4167 3221459 - 3221432 - f 70 -9.2 -2.88544 | opp_overlap 3221421 3221435 TGCTATGCTTACATA TCAGCGAACTAA TAAT TCGGTTCGCTGA TATGCCAGGAGTCTA EFER_3135 3221682 - 3222062 + | Malonate transporter MadL subunit TERM 4168 3222288 - 3222301 + G 82 -8.1 -4.57569 | AGGCAAAAAGGGCCT GGCTG ATAT CAGCC TTTTTAGCGGCATCG TERM 4169 3222411 - 3222397 - g 82 -2.7 -5.2166 | opp_overlap 3222398, overlap 3222398 GAAGAACTGAAAAAA GCCGG ACTAG CCGGT CTGTTGGCGCTGATC EFER_3136 3222079 - 3222849 + | Malonate transporter, MadM subunit TERM 4170 3223069 - 3223057 - g 71 -3.3 -4.78477 | opp_overlap 3223057 AGAGATAAAAAATAA GCTTC AAC GTAGC GTTATTGGATGTGCA EFER_3137 3222893 - 3223324 + | hypothetical protein EFER_3138 3224228 - 3223287 - | Malonate utilization transacting regulator MdcR TERM 4171 3224126 - 3224152 + g 71 -3 -4.87807 | CACGATGAACACTTA CGGCAGAG ATATTCATCGC CTCTGCTG TTTTTGATATATTCA mtr 3225572 - 3224328 - | tryptophan transporter of high affinity TERM 4172 3224579 - 3224563 - G 70 -4.3 -4.44667 | TCCGGGAACAACAAA CCACCCA CAA CAGGCGG TGCGAAGGTCAACAG TERM 4173 3224678 - 3224662 - G 70 -4.3 -4.48902 | AGATAGTCAAACAAA CCCAGCG TAA CACCGAG GAACGAACTCGCTAC TERM 4174 3225199 - 3225180 - G 81 -4.9 -5.09259 | CAGTGCAAAACAAAA TCCCGCC GCCCGT GCCGGGA CATTCAGCGACATCT TERM 4175 3225545 - 3225518 - G 76 -10.6 -3.28712 | gap 1, opp_overlap 3225517 3225537 TGGTGCCGCCGATAA TCACCA-CGCCGC CAA GCAGCGACGGTGA CGTTTGGGTGGTGGT TERM 4176 3225606 - 3225596 - g 70 -4 -4.65895 | opp_overlap 3225596 3225601 CTCTCCAGTGAAAAA TAGT GCG ACTA TGTTGTTATGTATTG TERM 4177 3225682 - 3225660 - g 100 -10.6 -6.38655 | opp_overlap 3225658 3225656 3225654 3225660 AAAGACAAAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT TERM 4178 3225660 - 3225682 + G 74 -10.6 -3.17888 | opp_overlap 3225660, overlap 3225658 3225656 3225654 AAAGACAAAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT EFER_3140 3225573 - 3225725 + | hypothetical protein deaD 3227615 - 3225726 - | ATP-dependent RNA helicase TERM 4179 3226830 - 3226848 + g 70 -3.8 -4.72272 | overlap 3226831 ACGCTCAAGAGCTTC TGCCACTT CCA AAGTCGCG TTTTTGGTACGAACG TERM 4180 3227760 - 3227735 - R 86 -9.7 -4.04023 | overlap 3227736 ATTAACGAACAACAA CGCCCTCACCT GTTA AGGTGATGGCA ATCAAAAAAGATTAC TERM 4181 3227759 - 3227736 - R 79 -11 -3.01329 | overlap 3227735 TTAACGAACAACAAC GCCCTCACCT GTTA AGGTGATGGC AATCAAAAAAGATTA nlpI 3228679 - 3227795 - | lipoprotein precursor TERM 4182 3228776 - 3228755 - R 100 -15.1 -4.07568 | CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC pnp 3230992 - 3228788 - | polynucleotide phosphorylase/polyadenylase TERM 4183 3231148 - 3231132 - R 100 -10.8 -5.03314 | opp_overlap 3231132 GTCAGTTTGAAAAAA GGGGCC ACTCA GGCCCC TTTTCTGAAACTCGC TERM 4184 3231132 - 3231148 + r 100 -10.8 -4.38712 | opp_overlap 3231132 GTCAGTTTGAAAAAA GGGGCC ACTCA GGCCCC TTTTCTGAAACTCGC rpsO 3231438 - 3231169 - | 30S ribosomal subunit protein S15 TERM 4185 3231273 - 3231294 + g 85 -2.9 -5.34555 | opp_overlap 3231275, overlap 3231275 3231276 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC truB 3232531 - 3231587 - | tRNA pseudouridine synthase rbfA 3232932 - 3232531 - | 30s ribosome binding factor TERM 4186 3232870 - 3232881 + g 75 -4.4 -4.82855 | overlap 3232862 TTCGCGTTGCAGGAT GAGA GCGA TCTC TTTTTGCATTTCCTG TERM 4187 3232969 - 3232955 - R 100 -11.4 -5.24129 | opp_overlap 3232955 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4188 3232955 - 3232969 + r 100 -11.4 -4.68506 | opp_overlap 3232955 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4189 3233067 - 3233021 - R 76 -10.7 -2.53271 | opp_overlap 3233020 3233021, overlap 3233018 3233020 3233043 GTAGCCTGATAAGAC GCGCCAGCGTCGCATCAGGCA ATCCA TGCCGGATGCGGCGTAAACGC CTTATCCCGCATAGA TERM 4190 3233021 - 3233067 + r 76 -10.7 -2.57931 | opp_overlap 3233018 3233021 3233020 3233043, overlap 3233020 GTAGCCTGATAAGAC GCGCCAGCGTCGCATCAGGCA ATCCA TGCCGGATGCGGCGTAAACGC CTTATCCCGCATAGA TERM 4191 3233082 - 3233043 - R 84 -11.4 -3.09516 | opp_overlap 3233021 3233020, overlap 3233021 3233020 CGTCGCATCAGGCAA TCCATGCCGGATGCGGCG TAAA CGCCTTATCCCGCATAGA ACCCTAAAAACCTTA infB 3235767 - 3233095 - | translation initiation factor IF-2 TERM 4192 3233716 - 3233694 - G 76 -10.6 -3.28712 | opp_overlap 3233692 CGTCTGCCTTCAGAA CGATGTTCAC TTC GTGAACTTCG CCTTCGGTCATGTTA nusA 3237279 - 3235792 - | transcription termination/antitermination L factor TERM 4193 3235933 - 3235923 - G 74 -8.2 -3.89346 | opp_overlap 3235928, overlap 3235924 CTTCCAGCGTACAAA CGCC ACG GGCG GCCAGTTTGAATGCC TERM 4194 3236026 - 3236044 + g 82 -7.4 -4.57569 | TTCTTCCTGGGCCTG TGCAATGG TGG CCAGTGCA TTTTTAGCACGCTCG yhbC 3237759 - 3237307 - | hypothetical protein TERM 4195 3237796 - 3237784 - H 100 -6.9 -5.80248 | opp_overlap 3237783 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4196 3237840 - 3237825 - H 100 -10.4 -5.60689 | opp_overlap 3237824 3237825 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 4197 3237825 - 3237840 + H 76 -10.4 -3.03525 | opp_overlap 3237825, overlap 3237824 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA argG 3238390 - 3239733 + | argininosuccinate synthetase TERM 4198 3239744 - 3239771 + T 84 -11.3 -3.22409 | opp_overlap 3239743 3239742, overlap 3239747 3239768 AATAAAACATCAATT TTTCCCTGCCC TTTTAT GGGCAGGGTAA TTCAGTTACTGCTTG TERM 4199 3239747 - 3239768 + T 91 -13 -2.79684 | opp_overlap 3239743 3239742, overlap 3239744 AAAACATCAATTTTT CCCTGCCC TTTTAT GGGCAGGG TAATTCAGTTACTGC yhbX 3241378 - 3239777 - | putative inner membrane sulfatase YhbX TERM 4200 3241166 - 3241141 - G 71 -11.1 -2.9294 | overlap 3241133 TACACCATGCATAGA GGCTGATGCAG AGAT CCGCAGCAGCC AACAGCATAACTGGG TERM 4201 3241640 - 3241608 - R 95 -9.4 -4.52589 | gap 1, opp_overlap 3241614 3241616, overlap 3241616 TGCGGGGATATAAAA CAAAAAA-AGACGCT TTTC AGCGTCTCTTTTCTG GAATTTGGTACCGAG TERM 4202 3241614 - 3241633 + r 74 -6.4 -4.44974 | opp_overlap 3241608 3241616, overlap 3241616 GATATAAAACAAAAA AAGACGCT TTTC AGCGTCTC TTTTCTGGAATTTGG TERM 4203 3241631 - 3241616 - R 100 -9 -6.14618 | opp_overlap 3241614 3241616, overlap 3241608 TATAAAACAAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT TERM 4204 3241616 - 3241631 + r 78 -9 -3.82551 | opp_overlap 3241616 3241608, overlap 3241614 TATAAAACAAAAAAA GACGCT TTTC AGCGTC TCTTTTCTGGAATTT TERM 4205 3241771 - 3241793 + r 79 -7.7 -4.32607 | GATATCGCTGGTCGG CTTAGCCGG AGCAG CTGGCTGAG TTTGTTCGGTTTTGG secG 3242079 - 3241747 - | preprotein translocase membrane subunit TERM 4206 3242259 - 3242237 - R 84 -3.5 -5.41746 | gap 1, opp_overlap 3242256 AACTGCGGAAAAAAA CAGCAAA-AC CGAT GTGTTCGCTG AGAAAAAAGGCGACA TERM 4207 3242268 - 3242283 + r 73 -6 -4.57341 | opp_overlap 3242268 3242270, overlap 3242256 TTCGCTGAGAAAAAA GGCGAC AATC GCCGCC TTTTTAGCCAGCCTT TERM 4208 3242280 - 3242268 - R 100 -9.1 -5.24129 | opp_overlap 3242256 3242268, overlap 3242270 TTCGCTGAGAAAAAA GGCGA CAA TCGCC GCCTTTTTAGCCAGC glmM 3243644 - 3242307 - | phosphoglucosamine mutase TERM 4209 3242865 - 3242876 + g 70 -5.8 -4.26351 | GATATACATAATCTG GTCG CCAT CGAC TTTATTGCCTTCATG folP 3244485 - 3243637 - | 7,8-dihydropteroate synthase TERM 4210 3244539 - 3244520 - R 100 -12.8 -5.56673 | opp_overlap 3244520 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA TERM 4211 3244520 - 3244539 + r 91 -10.6 -4.18494 | opp_overlap 3244520 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA ftsH 3246509 - 3244575 - | protease, ATP-dependent zinc-metallo rrmJ 3247238 - 3246609 - | 23S rRNA methyltransferase TERM 4212 3247405 - 3247388 - g 90 -4.9 -5.34309 | gap 1, overlap 3247393 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG yhbY 3247364 - 3247657 + | putative RNA-binding protein TERM 4213 3247743 - 3247770 + T 100 -13.6 -3.25946 | gap 1, opp_overlap 3247750, overlap 3247750 CACGCTCTGTTCGTT GATAAAAGGCCGC ATA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4214 3247764 - 3247750 - T 100 -12.8 -4.36914 | opp_overlap 3247743 3247750 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA TERM 4215 3247750 - 3247764 + T 100 -12.8 -5.13137 | opp_overlap 3247750, overlap 3247743 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA greA 3248289 - 3247813 - | transcription elongation factor TERM 4216 3247851 - 3247862 + g 72 -7.2 -4.25104 | CTTCAAATTCAACTT CGCC GCCC GGCG TTTTGATGACCACAA TERM 4217 3248115 - 3248155 + g 74 -3.2 -4.88918 | gap 1, overlap 3248116 3248132 CTTTGATACGACCTT CGCAGAA-ACCCTGCTGTT CACG AGCTGCGTGGTATTCGGCG TTTTCTTTCAGGTCG TERM 4218 3248422 - 3248391 - H 91 -5.2 -5.68023 | gap 1, overlap 3248393 CCAGAAGCAAAAAAA TA-CCGACCCGGG TACAAGT CCCAGGTCAGCTA CAATTCACATTTTGA TERM 4219 3248419 - 3248393 - H 95 -9.4 -4.46828 | overlap 3248391 AGAAGCAAAAAAATA CCGACCCGGG TACAAGT CCCAGGTCAG CTACAATTCACATTT TERM 4220 3249803 - 3249789 - g 71 -2.7 -4.73388 | AAGTCTCAGCAAAAA CCGGC TCTTT GCAGG GGGTATATAACCTGG dacB 3248537 - 3249970 + | D-alanyl-D-alanine carboxypeptidase TERM 4221 3250001 - 3249983 - T 100 -13.1 -4.33928 | opp_overlap 3249983 TAGTCTAAAGAGAAA CCCCGGC ACATG GCCGGGG TTTAGCTGATTAACG TERM 4222 3249983 - 3250001 + T 100 -13.1 -3.71527 | opp_overlap 3249983 TAGTCTAAAGAGAAA CCCCGGC ACATG GCCGGGG TTTAGCTGATTAACG obgE 3251183 - 3250011 - | GTPase involved in cell partioning and DNA repair TERM 4223 3250745 - 3250759 + g 70 -5.6 -4.40804 | GCTCGCGCTTATCGC CCGGCG TAC CGTTGG TTTTCTGCCGTGGTG yhbE 3252164 - 3251199 - | conserved hypothetical protein; putative inner membrane protein TERM 4224 3251431 - 3251394 - G 76 -9.1 -3.74198 | gap 1, overlap 3251387 AAAAAACAGCGTAAA CAGTG-GGGTGAGCGTGA TGA TCGCGCTCACCTGCGCTG CCTGCCAGCGAGCCA TERM 4225 3252241 - 3252262 + r 100 -15.9 -3.794 | opp_overlap 3252241 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG TERM 4226 3252262 - 3252241 - R 100 -15.9 -4.75174 | opp_overlap 3252241 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG rpmA 3252548 - 3252291 - | 50S ribosomal subunit protein L27 rplU 3252880 - 3252569 - | 50S ribosomal subunit protein L21 TERM 4227 3253679 - 3253651 - g 70 -5.1 -4.3586 | opp_overlap 3253669 TTATCTATAGCAAAA CCGCGCGTCTG TTTGAGG CTGCCGCGCAG TGTTCCGGGATTCTG ispB 3253140 - 3254111 + | octaprenyl diphosphate synthase TERM 4228 3254141 - 3254157 + F 70 -9.4 -2.7386 | opp_overlap 3254137 3254136, overlap 3254153 TTTCAATTAATTCTA TCCCGC CTTGT GCGGGA TAATTCCAGTAAGTT sfsB 3254312 - 3254635 + | DNA-binding transcriptional activator of maltose metabolism TERM 4229 3254681 - 3254647 - T 100 -14.4 -5.58209 | CTAAATTGAAAAAAA GCGGTAACTCCAGC GCCACTG GCTTGAGTTACCGC CTGACGATTACTCGC murA 3255948 - 3254689 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase yrbA 3256256 - 3256002 - | putative DNA-binding transcriptional regulator TERM 4230 3256356 - 3256332 - R 100 -11.4 -5.05712 | ATAAATAAGCAAAAA GCCCCGTTTG ATAAA CAATCGGGGC TAGTGGAAGTAACGT yrbB 3256675 - 3256382 - | hypothetical protein TERM 4231 3256454 - 3256466 + g 72 -7.7 -3.9444 | TTCGTTTACGCCCCG TAGCG TCA CGCTA TTTCCTTGCCGTTTC TERM 4232 3256660 - 3256674 + g 71 -2.8 -4.80737 | CCATCCGCATCCAGC TCAGTG ACT CACTCA TTATTTTTTCTCTTC yrbC 3257310 - 3256675 - | toluene transporter subunit: membrane component of ABC superfamily yrbD 3257895 - 3257329 - | toluene transporter subunit: membrane component of ABC superfamily TERM 4233 3257374 - 3257398 + g 77 -8.5 -4.10144 | overlap 3257375 3257396 TTGATTATTGCCTTC ATCTGGCGCTG GCG CATCGCCAGAA TTCTTATTCTCTTCG TERM 4234 3257375 - 3257397 + g 75 -12 -3.05002 | overlap 3257374 3257396 TGATTATTGCCTTCA TCTGGCGCTG GCG CATCGCCAGA ATTCTTATTCTCTTC yrbE 3258667 - 3257885 - | toluene transporter subunit: membrane component of ABC superfamily TERM 4235 3258244 - 3258228 - G 72 -4.4 -4.62336 | gap 1, overlap 3258229 3258238 3258241 ACTCCAGCCCAAAAA CGCGGTG AAAT CACC-CG CCGGAGCGGATCGAC yrbF 3259490 - 3258675 - | toluene transporter subunit: ATP-binding component of ABC superfamily TERM 4236 3260267 - 3260281 + G 70 -10 -3.21416 | TTATTATGCCTGTCG CCACCA GAA TGGTGG TTGATAATGCCACTG TERM 4237 3260434 - 3260412 - g 76 -7.8 -4.24002 | GCGCAAAGGTGAAAA TGATATTGCC GTA GGAAATATCA TCGGCGCAAACATAT TERM 4238 3260567 - 3260590 + G 70 -10.4 -3.16191 | gap 1 TTATATTCGCGTTAC TTTGCTGGCGG CGT CCG-CAGCAAA TTGGTCGCAGTGTCG yrbG 3259666 - 3260679 + | putative calcium/sodium:proton antiporter TERM 4239 3261168 - 3261149 - g 86 -10.6 -3.99347 | AAAGTACCGAAAGAA GCCTGCCC GCTG GGGCTGGC CCCAACCAGTAGCAC kdsD 3260693 - 3261679 + | D-arabinose 5-phosphate isomerase TERM 4240 3262048 - 3262033 - g 70 -6.8 -4.07885 | GATCTTCTGGCAAAA CTGGCG ATTG CACCAG AGAACGTCGCTTACA TERM 4241 3262134 - 3262102 - g 95 -9.7 -4.65895 | CCGGTTATGGAAAAA GTGGGCTTCAGCGTC GCT GTCGCCGATGCACAC CCGTTATTGTTACCA kdsC 3261697 - 3262263 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase yrbK 3262260 - 3262835 + | hypothetical protein TERM 4242 3263343 - 3263329 - gf 71 -3.4 -4.80417 | overlap 3263330 GATAAAAACAATAAA GGCCAG GCC CCGGCG CAGAAAAAGGGTAAT lptA 3262804 - 3263361 + | putative lipopolysaccharide transport protein A: periplasmic-binding component of ABC superfamily lptB 3263368 - 3264093 + | putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily TERM 4243 3264195 - 3264221 + G 72 -10.2 -3.30124 | opp_overlap 3264201, overlap 3264187 GCGATGACGCCTCAG TTACAACAGGCG ATT CGTCTGTTGCAA TTGTCGACGCTGGAA rpoN 3264141 - 3265574 + | RNA polymerase, sigma 54 (sigma N) factor yhbH 3265597 - 3265884 + | ribosome-associated, sigma 54 modulation protein TERM 4244 3265912 - 3265938 + F 90 -10.8 -3.92522 | overlap 3265907 3265913 TTAACGGGTGCAGGA GGGCCTGTTGTG TAA CGCAACGGGCCG TTTGTACAGTTAGCG TERM 4245 3265913 - 3265937 + F 100 -14.3 -2.95192 | overlap 3265907 3265912 TAACGGGTGCAGGAG GGCCTGTTGTG TAA CGCAACGGGCC GTTTGTACAGTTAGC TERM 4246 3266488 - 3266458 - g 72 -6.3 -4.3898 | gap 1 AGGAGTTGTACAAAA TCATTACTGATACC GAAG GGGATCAG-AATGA GGCGTAGCACCACCG ptsN 3266004 - 3266495 + | sugar-specific enzyme IIA component of PTS TERM 4247 3266503 - 3266513 + F 82 -8.2 -4.371 | overlap 3266492 AGGCGTAGCACCACC GGGG GCT CCCC TTTTGATGTAGTGAG TERM 4248 3266549 - 3266535 - f 77 -8.6 -3.97947 | TGTAGTGAGGAGAAA CAGTAC ATG GTACTG ATGATCGTCAGCGGT TERM 4249 3267374 - 3267353 - g 70 -4.4 -4.56597 | CTCGCGCGGTAAAAA CGTACAGT CACGCC ACCGCACG CTGGAAAAACGCAAA yhbJ 3266541 - 3267395 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain npr 3267392 - 3267664 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4250 3267700 - 3267711 + F 89 -7.2 -5.03994 | opp_overlap 3267699 3267700 CCCCCATCTCAAAAG CGCC ACCC GGCG TTTTTCTATCTCCCC TERM 4251 3268477 - 3268455 - g 85 -11.4 -3.69333 | opp_overlap 3268455 3268469 GACAAGCCATCTAAA GAGAGAAACA AAT TGTCTCTCTC TTCTCGAGAGGCTTA yrbL 3267861 - 3268493 + | hypothetical protein mtgA 3269215 - 3268490 - | biosynthetic peptidoglycan transglycosylase TERM 4252 3268957 - 3268940 - G 72 -7.7 -3.86684 | opp_overlap 3268939 AGAAGCGATATCAAA TCCCCAG TGAT CTGGGAA AGTTTGATCTTCAGC TERM 4253 3269213 - 3269190 - G 79 -3.8 -5.03747 | AAACGGCGCAAAAAA GAGGGCAAGA AACG CCTTACACTC ATTCAGCCAGAACCA elbB 3269865 - 3269212 - | isoprenoid biosynthesis protein with amidotransferase-like domain TERM 4254 3269460 - 3269436 - G 74 -2.7 -4.98531 | overlap 3269429 3269437 CCGGGAAAGCAAAAA TTTTCGCCAAC ATT GCCGGCGCAAT ACACATAAAGCCCAA TERM 4255 3270074 - 3270096 + r 87 -4.7 -5.57054 | overlap 3270075 3270077 TGGCGCAGTATTCGC GCACCCCGG TTAAT CCGGGGTCA TTTTTTTCCGTTCTT TERM 4256 3270075 - 3270095 + r 77 -8.2 -3.91792 | overlap 3270074 3270077 GGCGCAGTATTCGCG CACCCCGG TTAAT CCGGGGTC ATTTTTTTCCGTTCT TERM 4257 3270077 - 3270093 + r 83 -10.8 -3.52477 | overlap 3270075 3270074 CGCAGTATTCGCGCA CCCCGG TTAAT CCGGGG TCATTTTTTTCCGTT arcB 3272430 - 3270094 - | hybrid sensory histidine kinase in two-component regulatory system with ArcA TERM 4258 3270490 - 3270508 + g 71 -3 -4.77036 | CGTGCTCTCCTCTTC GTCCTGAG TAT CCCAGAAC TTTTTGATCATCGCG yhcC 3273454 - 3272525 - | putative Fe-S oxidoreductase TERM 4259 3273680 - 3273696 + H 95 -9.5 -4.48741 | opp_overlap 3273679 3273680 TCATTACTCATTAAT GCAGTAT AAA ATACTGC TTTTCTCGTCAGTTC TERM 4260 3273922 - 3273942 + H 71 -8.3 -3.54 | overlap 3273921 3273923 3273925 CGCTGGAAGCTTTCT GGATGAGCA GCC TGCTCATCA TATTTATGCAGTAAT TERM 4261 3273923 - 3273941 + H 83 -11.8 -2.71918 | overlap 3273922 3273921 3273925 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 4262 3275297 - 3275284 - g 72 -5.2 -4.58283 | GAAGTGGTCGAAAAA GGCC GCGTAG GGCC GGGTGAACTGATGGT TERM 4263 3277758 - 3277731 - g 70 -6.2 -4.1899 | opp_overlap 3277753, overlap 3277734 CTACTGCACCGAAAA CAACCCGCCGTT TGAT AACGGCCTGCTG AATGCGCAGTTGCTG gltB 3274027 - 3278580 + | glutamate synthase, large subunit TERM 4264 3279053 - 3279037 - g 74 -2.1 -5.07107 | opp_overlap 3279047, overlap 3279039 CAAACCGGTAAAAAA GTGGCGA TTA TCGGCGC AGGCCCGGCAGGTCT TERM 4265 3279367 - 3279345 - g 74 -7.6 -4.13767 | overlap 3279351 TGGCGGACTGGAAAA CGAAGACGCC GAT GGCGTGTACG CAGCGCTGCCGTTCC gltD 3278593 - 3280011 + | glutamate synthase, 4Fe-4S protein, small subunit TERM 4266 3280521 - 3280499 - g 100 -16.4 -3.6106 | overlap 3280510 TTCAACATGTTGAAA TTCGCCAGAC AGT GTCTGGCGAA TTAACACCATTGGGA TERM 4267 3280572 - 3280526 - g 100 -19.6 -3.33696 | opp_overlap 3280522, overlap 3280510 3280528 TGTCTGGCGAATTAA CACCATTGGGAATTCCGCAGAC ACC GTCTGCAGAATTCCCATCGGCA AAGATTTGGCAGACG TERM 4268 3280570 - 3280528 - g 100 -22.2 -3.23853 | opp_overlap 3280522, overlap 3280510 3280526 TCTGGCGAATTAACA CCATTGGGAATTCCGCAGAC ACC GTCTGCAGAATTCCCATCGG CAAAGATTTGGCAGA TERM 4269 3280601 - 3280575 - g 100 -18.2 -3.57263 | opp_overlap 3280522 3280577 ATTCCCATCGGCAAA GATTTGGCAGAC GCT GTCTGCCAAATC GTTCCCCCTGCCCTG TERM 4270 3280577 - 3280599 + G 90 -15 -2.72344 | opp_overlap 3280575 TCCCATCGGCAAAGA TTTGGCAGAC GCT GTCTGCCAAA TCGTTCCCCCTGCCC yhcG 3280195 - 3281322 + | hypothetical protein TERM 4271 3281337 - 3281363 + T 100 -12.4 -3.53444 | overlap 3281339 ATTTCAGCGGTTTCG AATTCTGCAGAC AGT GTCTGCAGAATC TTTAAAACGAACTAA TERM 4272 3281339 - 3281361 + T 100 -15 -3.34517 | overlap 3281337 TTCAGCGGTTTCGAA TTCTGCAGAC AGT GTCTGCAGAA TCTTTAAAACGAACT yhcH 3281846 - 3281382 - | hypothetical protein nanK 3282718 - 3281843 - | putative N-acetylmannosamine kinase nanE 3283404 - 3282715 - | putative N-acetylmannosamine-6-P epimerase TERM 4273 3283444 - 3283424 - R 100 -12.5 -4.25104 | overlap 3283425 CTTCCCTTAGCAAAA GGCCCGGTC CAG GACCGGGCA ACAGGATTAACTTTT TERM 4274 3283443 - 3283425 - R 100 -16 -3.14848 | overlap 3283424 TTCCCTTAGCAAAAG GCCCGGTC CAG GACCGGGC AACAGGATTAACTTT nanT 3284941 - 3283451 - | sialic acid transporter TERM 4275 3284954 - 3284975 + r 100 -12.3 -3.8377 | gap 1 CATTGTGAGTCTCCC GCG-GTGGGC GAT GCCCACACGC TTTGGTATAAAAATT TERM 4276 3285052 - 3285003 - R 77 -10.9 -2.89683 | gap 1, opp_overlap 3285033 3285035 ATTGTAGGGTACAGA TGCGCTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAACAA-CTCA CCCGCGCTCTTGCAT nanA 3285943 - 3285050 - | N-acetylneuraminate lyase nanR 3286847 - 3286065 - | DNA-binding transcriptional dual regulator TERM 4277 3286940 - 3286956 + r 85 -9.4 -4.23391 | opp_overlap 3286940, overlap 3286933 AGGTAGATAGCAAAA CAGGCC ACATG GGCCTG TTTATCATTTATTTC TERM 4278 3286956 - 3286940 - R 88 -9.4 -4.39568 | opp_overlap 3286940 3286933 AGGTAGATAGCAAAA CAGGCC ACATG GGCCTG TTTATCATTTATTTC sspB 3287468 - 3286965 - | ClpXP protease specificity-enhancing factor sspA 3288112 - 3287474 - | stringent starvation protein A TERM 4279 3287762 - 3287788 + g 75 -5.3 -4.66609 | gap 1, overlap 3287764 ATTAGAACCGTTCAT GA-TGGTATTCA TCAG TGAGTACCAGTC TTTTTCGATACGGTG EFER_3200 3288194 - 3288370 + | hypothetical protein TERM 4280 3288376 - 3288389 + T 100 -9.5 -5.02074 | opp_overlap 3288376 TTGGCGATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCCAATGG TERM 4281 3288389 - 3288376 - T 100 -9.5 -5.60993 | opp_overlap 3288376 TTGGCGATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCCAATGG rpsI 3288820 - 3288428 - | 30S ribosomal subunit protein S9 rplM 3289264 - 3288836 - | 50S ribosomal subunit protein L13 TERM 4282 3289126 - 3289141 + g 70 -6.8 -4.05446 | CACCGGTATCTACGT GCGGAG TGTA TTCCGC TTTGTGCTTACCGCG TERM 4283 3289442 - 3289460 + r 100 -8.8 -5.06735 | opp_overlap 3289440 GATTATAGAGAAGTC GGGGTCAA AGA TCGACCCC TTTTTGTGATTTGTG yhcM 3290610 - 3289483 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4284 3291042 - 3291065 + G 78 -12.4 -2.87344 | opp_overlap 3291042 AGCATATGGCGAAAA GCTCCAGCAG CCTG CTGCCGGAGC TGTCTGCGGAGGCTA TERM 4285 3291065 - 3291042 - g 100 -14.6 -4.13282 | opp_overlap 3291042 AGCATATGGCGAAAA GCTCCAGCAG CCTG CTGCCGGAGC TGTCTGCGGAGGCTA yhcB 3290804 - 3291202 + | putative cytochrome d ubiquinol oxidase subunit III TERM 4286 3291213 - 3291231 + F 89 -12.4 -2.83964 | ATTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTGTCCTG degQ 3291357 - 3292724 + | serine endoprotease, periplasmic degS 3292814 - 3293881 + | serine endoprotease, periplasmic TERM 4287 3293904 - 3293886 - T 74 -8.1 -4.05926 | opp_overlap 3293886, overlap 3293878 CAACAAACTGATAAA GCTCCCC CGCCT GAGGAGC TATATTAAATCAACA EFER_3207 3294085 - 3293909 - | oxaloacetate decarboxylase beta chain 1 (fragment) TERM 4288 3294068 - 3294089 + g 75 -4.3 -4.7373 | ATGAGCCAGGACTGA CGGTATGGC CAAT GCCAAAGCG TTTTTAATGGCATAA EFER_3208 3294948 - 3294331 - | L(+)-tartrate dehydratase beta subunit TERM 4289 3294470 - 3294452 - G 70 -6 -4.15366 | overlap 3294447 ATTGAAACAATTAAA GGGCCAAA CTC TTTAACCC GGCAAACCCACAATG ttdA 3295847 - 3294948 - | L(+)-tartrate dehydratase alpha subunit TERM 4290 3295212 - 3295223 + g 86 -7.2 -5.00616 | overlap 3295172 3295170 ATGAGAACCAACCGG GCGC ATCA GCGC TTTTTTCGACAGCAA EFER_3210 3297189 - 3295879 - | putative charged metabolite transporter TERM 4291 3296603 - 3296589 - G 84 -3.5 -5.30155 | TCAGGAAGTAAAAAA TGCCG CAAGC CAGCA TGGGCAGGCCGATTT TERM 4292 3297065 - 3297081 + g 70 -4.4 -4.56597 | gap 1, opp_overlap 3297054 3297065 CAAACGATCATAGAA GTGACCG CCAG CGG-CAC TTTTTCCCACACAAA TERM 4293 3297355 - 3297327 - R 74 -9.6 -3.2981 | overlap 3297329 TATATCAATGATTAA TATCGCCTGCAC AGGAG GTGCAGACGATC AGATCAGGCGGCGGG TERM 4294 3297353 - 3297329 - R 86 -12.2 -3.20941 | overlap 3297327 TATCAATGATTAATA TCGCCTGCAC AGGAG GTGCAGACGA TCAGATCAGGCGGCG EFER_3211 3298024 - 3297359 - | putative regulatory protein, gntR family TERM 4295 3297431 - 3297442 + g 83 -5.8 -4.88129 | ATGGTCATGCATACG CTGG CGGG CCAG TTTTTCATCATTTTT EFER_3212 3298802 - 3298011 - | putative GntR-family transcriptional regulator TERM 4296 3298759 - 3298728 - G 73 -9.5 -3.63991 | opp_overlap 3298735, overlap 3298735 GAGGATCTGCAAGAA CAAAAAACCGGAG GCATTA CTCCGGTTTATCG TTGTGGTGATACAAA TERM 4297 3298735 - 3298752 + g 77 -8.4 -4.11281 | opp_overlap 3298728 3298735 TGCAAGAACAAAAAA CCGGAG GCATTA CTCCGG TTTATCGTTGTGGTG TERM 4298 3298752 - 3298735 - G 100 -8.4 -5.64873 | opp_overlap 3298735, overlap 3298728 TGCAAGAACAAAAAA CCGGAG GCATTA CTCCGG TTTATCGTTGTGGTG mdh 3299718 - 3298780 - | malate dehydrogenase, NAD(P)-binding EFER_3214 3299995 - 3299825 - | hypothetical protein argR 3300133 - 3300603 + | DNA-binding transcriptional dual regulator, L-arginine-binding TERM 4299 3300606 - 3300635 + F 83 -10.7 -3.55444 | overlap 3300608 ACAAGAACTTTAATC CCTTTCCCCCGTC GCCA GACGGGGGAAATC TTTCGCCACTCCCCG TERM 4300 3300608 - 3300633 + F 100 -17.7 -3.35597 | overlap 3300606 AAGAACTTTAATCCC TTTCCCCCGTC GCCA GACGGGGGAAA TCTTTCGCCACTCCC TERM 4301 3300804 - 3300793 - f 79 -3 -5.37865 | opp_overlap 3300793 3300802 TCAACAATTAAAAAA TGAA ATGA TTCA TATTTGTTATGATTT yhcN 3300957 - 3301220 + | hypothetical protein TERM 4302 3301248 - 3301267 + T 100 -7.8 -5.82172 | AAGTCCGACGATATT GCCCCC CAACTGCC GGGGGC TTTTTTTATCTTAAT EFER_3217 3301661 - 3301278 - | putative barnase inhibitor TERM 4303 3301636 - 3301654 + g 75 -6.6 -4.35742 | opp_overlap 3301636, overlap 3301627 ATAGGCGTAAAAAAA CCGACGCT GTT GGCATCGG TTTTCATACTTAACT TERM 4304 3301654 - 3301636 - G 100 -8.1 -5.42862 | opp_overlap 3301636 3301627 ATAGGCGTAAAAAAA CCGACGC TGTTG GCATCGG TTTTCATACTTAACT aaeB 3303631 - 3301664 - | p-hydroxybenzoic acid efflux system component aaeA 3304569 - 3303637 - | p-hydroxybenzoic acid efflux system component TERM 4305 3304511 - 3304497 - G 72 -5.7 -4.58395 | CCCAGGCGCGAAAAA TGGCA ATAAA TGCCA GGATAACCAGTACCA aaeX 3304780 - 3304577 - | membrane protein of efflux system aaeR 3304964 - 3305893 + | DNA-binding transcriptional regulator, efflux system tldD 3307418 - 3305973 - | putative peptidase TERM 4306 3307180 - 3307192 + g 70 -5.5 -4.37886 | CTTATCTGATCGGCA TAGGC AAA GCCTG TTTTCTCACCGCTGA yhdP 3311364 - 3307573 - | conserved hypothetical protein; putative membrane protein, putative transporter TERM 4307 3307940 - 3307928 - G 79 -4.1 -5.10208 | GAATCGTAATAAAAA CCTTC ACC AAAGG TATCGCTGAAATCAA TERM 4308 3308328 - 3308349 + g 70 -4.4 -4.56597 | opp_overlap 3308330 TGCCATTAATTGCAA TATCGCCG TCGATC CGGCCATA TTTTTGCCCCCAAAA TERM 4309 3311410 - 3311390 - R 95 -9.6 -4.56597 | opp_overlap 3311408 TTGTCTGCCTAAAAA GGGCCGTC TGACT GGCGGCCC GGTGCGGGTTTACAT TERM 4310 3311408 - 3311418 + r 73 -8.2 -3.71527 | opp_overlap 3311390 CCGTCTGACTGGCGG CCCG GTG CGGG TTTACATCATTACAA rng 3312889 - 3311420 - | ribonuclease G yhdE 3313472 - 3312879 - | putative septum formation protein TERM 4311 3313214 - 3313226 + g 72 -4.7 -4.64598 | overlap 3313208 TTGCGCTTGCGTGTG CAGCG TCG CGCGG TTTTTCCAGTACTTC mreD 3313978 - 3313490 - | cell wall structural complex MreBCD transmembrane component MreD TERM 4312 3313899 - 3313872 - G 77 -12.8 -2.76442 | overlap 3313869 AGCAGTACCCAATTA GGCCGGAAAACA ATGA TATTCTCCGGCC AGGGCATGATTTGCA mreC 3315042 - 3313978 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4313 3315060 - 3315111 + r 100 -13.9 -3.08679 | gap 2, overlap 3315062 GTTATGCGTATTCTC GT-GTCAGATTC-GGCAGGGTTAGC AAGC GCTCACCCTGCCAGCATCTGGCTAC TCTTCGCTGAACAGG TERM 4314 3315062 - 3315108 + r 100 -16.7 -2.75992 | gap 1, overlap 3315060 TATGCGTATTCTCGT GTCAGATTC-GGCAGGGTTAGC AAGC GCTCACCCTGCCAGCATCTGGC TACTCTTCGCTGAAC mreB 3316151 - 3315108 - | cell wall structural complex MreBCD, actin-like component MreB csrD 3318398 - 3316458 - | inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways yhdH 3318550 - 3319524 + | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 4315 3319649 - 3319671 + G 100 -4.2 -5.60993 | gap 1, opp_overlap 3319649 CGCAAACTTACAGAA GCCGATGTC ACTGCA GA-ATCGGC TTTTTTTATGCAACG yedY 3319622 - 3320626 + | exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export yedZ 3320627 - 3321226 + | heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit accB 3321614 - 3322084 + | acetyl CoA carboxylase, BCCP subunit TERM 4316 3322589 - 3322572 - g 72 -8.3 -3.78775 | CCGGTGATTATCAAA GCCTCCG GCGG CGGCGGC GGTCGTGGCATGCGT accC 3322095 - 3323444 + | acetyl-CoA carboxylase, biotin carboxylase subunit TERM 4317 3323464 - 3323480 + F 100 -13.7 -5.5112 | opp_overlap 3323464 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG TERM 4318 3323480 - 3323464 - f 100 -13.7 -4.19276 | opp_overlap 3323464 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG yhdT 3323553 - 3323795 + | conserved hypothetical protein; putative inner membrane protein TERM 4319 3324302 - 3324314 + G 70 -10.5 -2.71791 | overlap 3324292 3324301 GCATTGCGTTGTATA CCGCC TTT GGCGG CTTTCGCGCCAGCGT panF 3323785 - 3325236 + | pantothenate:sodium symporter TERM 4320 3325311 - 3325339 + G 77 -8.9 -4.11216 | opp_overlap 3325320, overlap 3325312 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 4321 3325312 - 3325338 + G 79 -12.4 -3.06515 | opp_overlap 3325320, overlap 3325311 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3325248 - 3326129 + | methylase for 50S ribosomal subunit protein L11 TERM 4322 3326263 - 3326248 - f 79 -3.3 -5.38958 | opp_overlap 3326248 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTGGAGTGTG TERM 4323 3326423 - 3326409 - f 74 -4.2 -5.00884 | overlap 3326410 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG TERM 4324 3326422 - 3326410 - f 70 -7.7 -3.60048 | overlap 3326409 TCTCGTGCAAAAAAT GCGTA ATA TACGC CGCCTTGCAGTCACA dusB 3326458 - 3327423 + | tRNA-dihydrouridine synthase B fis 3327449 - 3327745 + | global DNA-binding transcriptional dual regulator TERM 4325 3327799 - 3327774 - f 70 -6 -4.25848 | opp_overlap 3327774 AATGCTTGATTAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGTGTC TERM 4326 3327774 - 3327799 + F 100 -8.2 -5.29782 | opp_overlap 3327774 AATGCTTGATTAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATACGTGTC TERM 4327 3327928 - 3327915 - g 100 -3.1 -5.63103 | TCTGAATTAAAAAAA CTTCC TTCT GAAAG TGTAGATTTAATTTT TERM 4328 3328657 - 3328647 - g 87 -4.6 -5.22039 | GCGAAAGTGAAAAAA CGCA AAA CGCG GAATCAGTCGAAAAA yhdJ 3327810 - 3328709 + | methyltransferase EFER_3242 3328797 - 3328961 + | hypothetical protein EFER_3243 3329638 - 3328979 - | putative acrEF/envCD operon repressor acrE 3330045 - 3331202 + | cytoplasmic membrane lipoprotein TERM 4329 3331245 - 3331292 + G 78 -8.4 -4.19238 | overlap 3331247 3331256 TTCGACGCCCAATTT TTGCCTGGGTGCTAGCCATCAT TTTA ATGATGGCTGGTGTGCTGGCTA TTTTACAGTTGCCGG TERM 4330 3331247 - 3331290 + G 81 -11 -3.69618 | overlap 3331245 3331256 CGACGCCCAATTTTT GCCTGGGTGCTAGCCATCAT TTTA ATGATGGCTGGTGTGCTGGC TATTTTACAGTTGCC TERM 4331 3331256 - 3331281 + G 78 -12.7 -2.84103 | overlap 3331247 3331245 ATTTTTGCCTGGGTG CTAGCCATCAT TTTA ATGATGGCTGG TGTGCTGGCTATTTT TERM 4332 3331625 - 3331607 - g 81 -6 -4.86001 | opp_overlap 3331621 ATTAGCGTAGAAAAA TCAAGCAG TAG CTACCTGA TGGTTGCAGGGTTTG TERM 4333 3332076 - 3332066 - g 81 -8.2 -4.32804 | AGAATCAATGGAAAA CCCG CTG CGGG TCTGGGTATCAAACT TERM 4334 3334254 - 3334267 + G 70 -6.7 -4.07535 | GCATGATCTCCGCAA CACTG CTGG CAGTG TTCTTTGTACCAGTT acrF 3331214 - 3334327 + | multidrug efflux system protein TERM 4335 3334337 - 3334359 + F 100 -12.1 -4.83246 | opp_overlap 3334341, overlap 3334341 AGTTAACATTTTTTA TAAAGGCGC TTAAT GCGCCTTTA TTTCTTTATTTATGA TERM 4336 3334355 - 3334341 - f 75 -8.5 -3.87641 | opp_overlap 3334337 3334341 AACATTTTTTATAAA GGCGC TTAAT GCGCC TTTATTTCTTTATTT TERM 4337 3334341 - 3334355 + F 100 -8.5 -4.88895 | opp_overlap 3334341, overlap 3334337 AACATTTTTTATAAA GGCGC TTAAT GCGCC TTTATTTCTTTATTT yhdV 3334558 - 3334779 + | conserved hypothetical protein; putative outer membrane protein TERM 4338 3334900 - 3334871 - f 73 -10.1 -3.01915 | opp_overlap 3334875, overlap 3334870 3334874 3334875 TCTCTACAAAAATAC TAACGCGCGAAAT TGTT ATTTCGCGCTTCA TCCTCCCTGAACTTT TERM 4339 3334897 - 3334874 - f 78 -9.6 -3.64205 | opp_overlap 3334875, overlap 3334871 3334870 3334875 CTACAAAAATACTAA CGCGCGAAAT TGTT ATTTCGCGCT TCATCCTCCCTGAAC TERM 4340 3334875 - 3334896 + F 95 -13.1 -3.22298 | opp_overlap 3334874 3334871 3334870 3334875 TACAAAAATACTAAC GCGCGAAAT TGTT ATTTCGCGC TTCATCCTCCCTGAA TERM 4341 3334896 - 3334875 - f 91 -13.1 -2.77439 | opp_overlap 3334875, overlap 3334874 3334871 3334870 TACAAAAATACTAAC GCGCGAAAT TGTT ATTTCGCGC TTCATCCTCCCTGAA TERM 4342 3335087 - 3335071 - f 88 -9.5 -4.27259 | opp_overlap 3335073, overlap 3335084 CACAGACAGGTAAAA GACGTTT CCC AAACGTC CTATAACGATAATTT aapJ 3335230 - 3336147 + | amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily TERM 4343 3336164 - 3336185 + F 100 -13.7 -3.07233 | opp_overlap 3336163 3336166, overlap 3336166 3336181 TCGGTGTGAGGTAAT GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGG TERM 4344 3336166 - 3336183 + F 77 -10.5 -3.09135 | opp_overlap 3336163 3336166, overlap 3336164 3336181 GGTGTGAGGTAATGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT aapQ 3336215 - 3337396 + | amino-acid transporter subunit ; membrane component of ABC superfamily aapM 3337406 - 3338509 + | amino-acid transporter subunit ; membrane component of ABC superfamily aapP 3338517 - 3339275 + | amino-acid transporter subunit ; ATP-binding component of ABC superfamily TERM 4345 3339303 - 3339322 + F 100 -13.6 -3.83214 | opp_overlap 3339303 TTCTGAACGCAAAAA GGCCATCC TTTC GGATGGCC TTTCACTTGATTTGA TERM 4346 3339322 - 3339303 - f 100 -13.6 -4.74103 | opp_overlap 3339303 TTCTGAACGCAAAAA GGCCATCC TTTC GGATGGCC TTTCACTTGATTTGA TERM 4347 3339404 - 3339418 + F 74 -7.8 -3.99324 | opp_overlap 3339404 TTCGCAACGTTCAAA TCCGCT CCC GGCGGA TTTGTCCTACTCGGG TERM 4348 3339504 - 3339455 - f 100 -23.3 -4.09117 | opp_overlap 3339459 3339464 3339469, overlap 3339464 3339469 TTCACCGACAAACAA CAGATAAAACAAAAGGCCCAGTC TTCC GACTGAGCCTTTTGTTTTATTTG ATGTCTGGCAGTTCC TERM 4349 3339459 - 3339500 + F 100 -20.5 -3.88498 | opp_overlap 3339455 3339464 3339469, overlap 3339464 3339469 CCGACAAACAACAGA TAAAACAAAAGGCCCAGTC TTCC GACTGAGCCTTTTGTTTTA TTTGATGTCTGGCAG TERM 4350 3339495 - 3339464 - f 100 -18.2 -4.74989 | opp_overlap 3339459 3339464 3339469, overlap 3339455 3339469 AAACAACAGATAAAA CAAAAGGCCCAGTC TTCC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4351 3339464 - 3339495 + F 100 -16 -4.98061 | opp_overlap 3339464 3339455 3339469, overlap 3339459 3339469 AAACAACAGATAAAA CAAAAGGCCCAGTC TTCC GACTGAGCCTTTTG TTTTATTTGATGTCT TERM 4352 3339490 - 3339469 - f 100 -12.3 -5.24647 | opp_overlap 3339464 3339459 3339469, overlap 3339464 3339455 ACAGATAAAACAAAA GGCCCAGTC TTCC GACTGAGCC TTTTGTTTTATTTGA TERM 4353 3339469 - 3339490 + F 100 -10.1 -5.34857 | opp_overlap 3339469 3339464 3339455, overlap 3339464 3339459 ACAGATAAAACAAAA GGCCCAGTC TTCC GACTGAGCC TTTTGTTTTATTTGA TERM 4354 3339882 - 3339903 + F 80 -8.7 -3.91196 | opp_overlap 3339873 GCAAATTCTGTTTCA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG TERM 4355 3342926 - 3342950 + F 74 -8 -3.93061 | gap 1, opp_overlap 3342932 AAAATTTGAGAGACT CAC-GAACAAC TTGC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4356 3342989 - 3343026 + F 100 -6.3 -5.68438 | opp_overlap 3342985 3342991, overlap 3342991 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4357 3342991 - 3343024 + F 93 -8.9 -4.47052 | opp_overlap 3342985 3342991, overlap 3342989 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4358 3343024 - 3342991 - f 76 -6.7 -4.49756 | opp_overlap 3342989 3342991, overlap 3342985 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4359 3345036 - 3345048 + G 74 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4360 3345068 - 3345082 + G 93 -4.2 -5.50925 | opp_overlap 3345068, overlap 3345057 3345069 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTTCTCTTCGTT TERM 4361 3345069 - 3345081 + G 72 -7.7 -3.88115 | opp_overlap 3345068, overlap 3345057 3345068 TCTTTCAGAGTCAAC CCTGA ATT TCAGG ATTTTTTCTCTTCGT yrdA 3345001 - 3345882 + | hypothetical protein aroE 3346930 - 3346112 - | dehydroshikimate reductase, NAD(P)-binding yrdC 3347507 - 3346935 - | putative ribosome maturation factor yrdD 3348054 - 3347512 - | putative DNA topoisomerase TERM 4362 3347567 - 3347557 - G 70 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 4363 3347926 - 3347894 - G 73 -11.3 -2.8001 | overlap 3347921 AGAACTTTGACGATA TGTCCATCCGCTGAA GAT TTCAGAGGACGGACG TAGTCACACGCCGGA smg 3348556 - 3348083 - | hypothetical protein smf 3349652 - 3348528 - | hypothetical protein def 3349782 - 3350291 + | peptide deformylase TERM 4364 3350352 - 3350374 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 4365 3350454 - 3350444 - g 74 -3.2 -5.02074 | GGACGCGGTAAAAAA CTGA TGC CCAG CCCGGTTAAAGTTCT TERM 4366 3350537 - 3350527 - g 85 -6.8 -4.77165 | overlap 3350528 3350534 GCGTCCACAAGAAAA CCAG CAA CTGG TCGCCGACCTGCAGG fmt 3350306 - 3351253 + | 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase TERM 4367 3351269 - 3351287 + F 95 -8 -5.01535 | overlap 3351270 TAGTCCACTCTTCTA AGCCCGGT CTT GCCGGGCA TTTTTATACTTATGA TERM 4368 3351270 - 3351286 + F 90 -11.5 -3.59837 | overlap 3351269 AGTCCACTCTTCTAA GCCCGGT CTT GCCGGGC ATTTTTATACTTATG TERM 4369 3351324 - 3351308 - g 88 -5.1 -5.17353 | overlap 3351311 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCACAGGC TERM 4370 3351321 - 3351311 - g 75 -5.4 -4.67552 | overlap 3351308 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCACA TERM 4371 3351447 - 3351461 + G 77 -10 -3.60971 | opp_overlap 3351416 AAGAGTTGTGCTTTG GCGTAC TGC GTACGC TTTCACAGTTAGACT TERM 4372 3352189 - 3352172 - g 75 -7 -4.33151 | TACGACAATTTAAAA CGCCTT GGTATG AAGGCG ACCGTGAAACAAGGT rsmB 3351299 - 3352588 + | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent trkA 3352610 - 3353986 + | NAD-binding component of TrK potassium transporter TERM 4373 3353982 - 3354021 + F 89 -7.2 -5.07652 | opp_overlap 3353991 3353994, overlap 3353988 3353991 3353994 CAAGTCCTTTCTTCT TGTAATTAATAAGGCGTC TTCT GGCGCCTTATTATTTCCC TTTTCTTTTCAAGGA TERM 4374 3353988 - 3354015 + F 100 -13.6 -4.03751 | opp_overlap 3353991 3353994, overlap 3353982 3353991 3353994 CTTTCTTCTTGTAAT TAATAAGGCGTC TTCT GGCGCCTTATTA TTTCCCTTTTCTTTT TERM 4375 3353991 - 3354012 + F 93 -10.9 -4.0921 | opp_overlap 3353991 3353994, overlap 3353988 3353982 3353994 TCTTCTTGTAATTAA TAAGGCGTC TTCT GGCGCCTTA TTATTTCCCTTTTCT TERM 4376 3354012 - 3353991 - f 71 -8.7 -3.33696 | opp_overlap 3353988 3353982 3353991 3353994, overlap 3353994 TCTTCTTGTAATTAA TAAGGCGTC TTCT GGCGCCTTA TTATTTCCCTTTTCT TERM 4377 3353994 - 3354009 + F 79 -8.2 -4.13254 | opp_overlap 3353991 3353994, overlap 3353991 3353988 3353982 TCTTGTAATTAATAA GGCGTC TTCT GGCGCC TTATTATTTCCCTTT mscL 3354116 - 3354526 + | mechanosensitive channel TERM 4378 3354541 - 3354591 + T 77 -11.2 -2.74322 | opp_overlap 3354531 3354530 3354543 3354546, overlap 3354541 AAAAGCCCCTGAAAG CAGAAGGCCAGTGGTAAAAAAGTG ATT TACTTTCTTGCCACTGGCCTCCCA GTTTCCCCGATTGCC TERM 4379 3354541 - 3354592 + T 84 -11 -3.57561 | gap 1, opp_overlap 3354531 3354530 3354543 3354546, overlap 3354541 AAAAGCCCCTGAAAG CAG-AAGGCCAGTGGTAAAAAAGTG ATT TACTTTCTTGCCACTGGCCTCCCAG TTTCCCCGATTGCCA TERM 4380 3354589 - 3354543 - T 100 -19.7 -2.90992 | opp_overlap 3354541 3354541, overlap 3354531 3354530 3354546 AAGCCCCTGAAAGCA GAAGGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCCTCC CAGTTTCCCCGATTG TERM 4381 3354586 - 3354546 - T 100 -17.8 -3.60151 | opp_overlap 3354541 3354541, overlap 3354530 3354543 CCCCTGAAAGCAGAA GGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCC TCCCAGTTTCCCCGA yhdL 3354741 - 3354523 - | hypothetical protein zntR 3355222 - 3354797 - | DNA-binding transcriptional activator in response to Zn(II) TERM 4382 3354885 - 3354859 - G 82 -9.5 -4.26871 | gap 1, overlap 3354851 3354861 GAATCGAGCAATAAA CACTGCTATGGG CGGT CCCACAGCAG-G CATCGTTAAGGCGTT TERM 4383 3354884 - 3354861 - G 100 -13.2 -3.72775 | overlap 3354851 3354859 ATCGAGCAATAAACA CTGCTATGGG CGGT CCCACAGCAG GCATCGTTAAGGCGT yhdN 3355601 - 3355233 - | hypothetical protein TERM 4384 3355664 - 3355697 + r 89 -11.9 -3.37879 | opp_overlap 3355660 3355674, overlap 3355665 3355674 TGGGGATACTACGGG TATAAAAAAACCCGC CGGG GCGGGTTTTTTTACG TTGCTTCAGATTACT TERM 4385 3355665 - 3355696 + r 91 -13.2 -2.62246 | opp_overlap 3355660 3355674, overlap 3355664 3355674 GGGGATACTACGGGT ATAAAAAAACCCGC CGGG GCGGGTTTTTTTAC GTTGCTTCAGATTAC TERM 4386 3355687 - 3355674 - R 100 -9.5 -5.61596 | opp_overlap 3355665 3355664 3355674, overlap 3355660 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4387 3355674 - 3355687 + r 100 -9.5 -5.54192 | opp_overlap 3355660 3355674, overlap 3355665 3355664 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4388 3355697 - 3355722 + r 73 -8.3 -3.67102 | overlap 3355718 GGCGGGTTTTTTTAC GTTGCTTCAGA TTAC TCTGCAGCAGC TTCTGCTTTCTCTGA rplQ 3356091 - 3355708 - | 50S ribosomal subunit protein L17 rpoA 3357121 - 3356132 - | RNA polymerase, alpha subunit TERM 4389 3356215 - 3356227 + g 74 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCAAGGTT TERM 4390 3357162 - 3357144 - R 77 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3357767 - 3357147 - | 30S ribosomal subunit protein S4 TERM 4391 3357257 - 3357267 + g 70 -6.8 -4.12188 | overlap 3357254 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4392 3357794 - 3357812 + r 74 -4.4 -5.00616 | opp_overlap 3357785 3357794 AACAAACCTGGAAAA CGAGGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3358190 - 3357801 - | 30S ribosomal subunit protein S11 TERM 4393 3358224 - 3358249 + r 71 -8.9 -3.39449 | overlap 3358225 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 4394 3358225 - 3358248 + r 74 -10.2 -2.63348 | overlap 3358224 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG rpsM 3358563 - 3358207 - | 30S ribosomal subunit protein S13 TERM 4395 3358388 - 3358406 + g 77 -8.8 -4.05446 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTCCTTCAGACA TERM 4396 3358680 - 3358651 - R 100 -12.3 -4.6645 | gap 1 CACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA secY 3360189 - 3358858 - | preprotein translocase membrane subunit TERM 4397 3359391 - 3359345 - G 73 -9.4 -3.56921 | opp_overlap 3359351 3359359, overlap 3359343 GGGAACAGAATAATA CTGGAAGCGAAGATTGCCGGGA TTA CCCCCGCCATATTCACTTTCAG CGGTAAATGTGTGCT TERM 4398 3359756 - 3359725 - G 71 -9.4 -3.51032 | opp_overlap 3359731, overlap 3359726 3359731 AGCGGTGAAGTAGAA CGCAAAGCCCGGGT TAAT AACCAGGCCTTGCA TACCAGGCATATTCG TERM 4399 3359755 - 3359726 - G 70 -10.7 -2.70298 | opp_overlap 3359731, overlap 3359725 3359731 GCGGTGAAGTAGAAC GCAAAGCCCGGGT TAAT AACCAGGCCTTGC ATACCAGGCATATTC rplO 3360631 - 3360197 - | 50S ribosomal subunit protein L15 TERM 4400 3360577 - 3360590 + g 75 -5.2 -4.59853 | opp_overlap 3360570, overlap 3360570 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3360814 - 3360635 - | 50S ribosomal subunit protein L30 rpsE 3361321 - 3360818 - | 30S ribosomal subunit protein S5 rplR 3361689 - 3361336 - | 50S ribosomal subunit protein L18 rplF 3362232 - 3361699 - | 50S ribosomal subunit protein L6 rpsH 3362637 - 3362245 - | 30S ribosomal subunit protein S8 rpsN 3362976 - 3362671 - | 30S ribosomal subunit protein S14 rplE 3363530 - 3362991 - | 50S ribosomal subunit protein L5 TERM 4401 3363368 - 3363386 + g 93 -6 -5.24531 | TTGCTGCCAGGTCTG CTGCTG CGTTATC CAGCAG TTTTTTGTCAGCGAT TERM 4402 3363474 - 3363485 + g 81 -4.4 -5.12617 | opp_overlap 3363474, overlap 3363453 AGAATTGTAGTTAAA CTCA GTCA TGAG TTTTTTAACTACTTC rplX 3363859 - 3363545 - | 50S ribosomal subunit protein L24 rplN 3364241 - 3363870 - | 50S ribosomal subunit protein L14 TERM 4403 3364381 - 3364356 - R 100 -14.9 -5.252 | opp_overlap 3364356 3364360 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4404 3364356 - 3364381 + r 100 -14.9 -3.25823 | opp_overlap 3364356, overlap 3364360 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4405 3364360 - 3364377 + r 100 -11.3 -4.29106 | opp_overlap 3364356, overlap 3364356 GGTAGAAAAAATAAA CGGCTCA TTTC TGAGCCG TTTATTCGTATCGAG rpsQ 3364660 - 3364406 - | 30S ribosomal subunit protein S17 TERM 4406 3364628 - 3364581 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 3364600 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA rpmC 3364851 - 3364660 - | 50S ribosomal subunit protein L29 rplP 3365261 - 3364851 - | 50S ribosomal subunit protein L16 rpsC 3365975 - 3365274 - | 30S ribosomal subunit protein S3 rplV 3366325 - 3365993 - | 50S ribosomal subunit protein L22 rpsS 3366618 - 3366340 - | 30S ribosomal subunit protein S19 rplB 3367456 - 3366635 - | 50S ribosomal subunit protein L2 TERM 4407 3367492 - 3367512 + r 80 -9.7 -3.57462 | opp_overlap 3367495, overlap 3367495 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3367776 - 3367474 - | 50S ribosomal subunit protein L23 TERM 4408 3367743 - 3367731 - G 78 -9.1 -3.85817 | ACGCTTTTTCAGAAA CGTGC GGT GCACG CAGCACCTTCAGCAG rplD 3368378 - 3367773 - | 50S ribosomal subunit protein L4 TERM 4409 3368346 - 3368358 + g 78 -10.5 -3.42663 | opp_overlap 3368341, overlap 3368345 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3369018 - 3368389 - | 50S ribosomal subunit protein L3 rpsJ 3369362 - 3369051 - | 30S ribosomal subunit protein S10 TERM 4410 3369452 - 3369468 + H 70 -9.4 -2.81316 | overlap 3369451 AACCGTTCTTACGTA GCTCCC CGATT GGGAGC ATTGTTAGGTAGTCA TERM 4411 3370176 - 3370194 + G 74 -7.4 -4.03204 | ACTGCGGGTTTCGTT GTAGGTTG GGA CAGCCTGC TTTCTGAATTTAATC EFER_3306 3369741 - 3370214 + | putative bifunctional prepilin peptidase HopD: leader peptidase; methyl transferase (General Secretory Pathway) bfr 3370680 - 3370204 - | bacterioferritin, iron storage and detoxification protein TERM 4412 3370521 - 3370497 - G 76 -3.6 -4.89477 | gap 1, opp_overlap 3370497 3370499, overlap 3370499 CTTCTAAGAACAAAA TACGCTCGATA TATT TATCG-GCGTG TTTCATCTCATCGAT bfd 3370947 - 3370753 - | bacterioferritin-associated ferredoxin TERM 4413 3371085 - 3371100 + r 100 -11.8 -4.8622 | opp_overlap 3371085 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTTAATTCGAAAC TERM 4414 3371100 - 3371085 - R 100 -11.8 -4.72986 | opp_overlap 3371085 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTTAATTCGAAAC TERM 4415 3371175 - 3371153 - R 84 -11.2 -3.73534 | GAACTTTAGCAACAA CGCCCGCACC AAC GGTACGGCCG CCTTCACGGATTGCG tufA 3372314 - 3371130 - | protein chain elongation factor EF-Tu (duplicate of tufB) TERM 4416 3372093 - 3372143 + g 74 -2.5 -5.06414 | overlap 3372063 3372095 GTGTGCGTAGTGACG GGTCGGGGTGTCATATTCAACGT GAGAA GTGTTGATGGTGATACCACGAGC TTTTTCTTCCGGCGC TERM 4417 3372359 - 3372334 - R 100 -15.5 -2.78935 | opp_overlap 3372330 3372329 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA fusA 3374499 - 3372385 - | protein chain elongation factor EF-G, GTP-binding TERM 4418 3374571 - 3374546 - R 84 -11.2 -3.63895 | gap 1, opp_overlap 3374536, overlap 3374536 TTTAAGTAGCCCAAA GCGGGCTGCTT ACTGG AAGC-GCCCGC CTGGTGACTAAAACT rpsG 3375066 - 3374596 - | 30S ribosomal subunit protein S7 rpsL 3375537 - 3375163 - | 30S ribosomal subunit protein S12 TERM 4419 3375607 - 3375585 - R 100 -12.8 -4.7268 | AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG tusB 3375950 - 3375663 - | methylsulfur transfer protein tusC 3376317 - 3375958 - | methylsulfur transfer protein tusD 3376703 - 3376317 - | methylsulfur transfer protein yheO 3377425 - 3376703 - | putative DNA-binding transcriptional regulator TERM 4420 3377521 - 3377509 - R 71 -9.1 -3.24804 | opp_overlap 3377509, overlap 3377507 3377505 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCATTAATT TERM 4421 3377509 - 3377521 + r 75 -9.1 -3.58305 | opp_overlap 3377509 3377507 3377505 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCATTAATT TERM 4422 3377548 - 3377591 + r 73 -5.5 -4.67552 | gap 2, opp_overlap 3377561, overlap 3377561 AATTATATCCGGCCT GCAATAAAAAAAATGCCGCCT GGTC AGGCGGCA--TTTCTTAATGC TTATTTTTTAGTAGC TERM 4423 3377580 - 3377561 - R 100 -13.6 -6.09888 | opp_overlap 3377548 3377561 CTGCAATAAAAAAAA TGCCGCCT GGTC AGGCGGCA TTTCTTAATGCTTAT TERM 4424 3377561 - 3377580 + r 100 -13.6 -4.29829 | opp_overlap 3377561, overlap 3377548 CTGCAATAAAAAAAA TGCCGCCT GGTC AGGCGGCA TTTCTTAATGCTTAT fkpA 3378404 - 3377592 - | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) TERM 4425 3377974 - 3377987 + g 70 -5.3 -4.32857 | ACCAGGCCAGTTGAT GATGT TTTA ACATC TTTCTCTTTAGCAAA slyX 3378624 - 3378842 + | hypothetical protein TERM 4426 3378848 - 3378876 + T 100 -14.7 -2.85763 | opp_overlap 3378855, overlap 3378855 ACATTATTGAGGCAT AAAAAAAGCGGGG ATT CCCCGCTTTTTTG TCACTTTTTCGGTAT TERM 4427 3378869 - 3378855 - T 100 -12.8 -5.64274 | opp_overlap 3378848 3378855 TGAGGCATAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACTTTT TERM 4428 3378855 - 3378869 + T 100 -12.8 -5.35222 | opp_overlap 3378855, overlap 3378848 TGAGGCATAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACTTTT slyD 3379481 - 3378891 - | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) TERM 4429 3379455 - 3379466 + g 72 -5.8 -4.39989 | overlap 3379439 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3379776 - 3379576 - | hypothetical protein kefB 3381591 - 3379786 - | potassium:proton antiporter kefG 3382145 - 3381591 - | component of potassium effux complex with KefB TERM 4430 3382516 - 3382492 - g 74 -9.9 -3.50722 | opp_overlap 3382490, overlap 3382490 GTGAATCAGGAAACA CCAGCGCTACC GCA AGCGGCGCTGG AATATGTCATTGACG TERM 4431 3383585 - 3383555 - g 70 -6 -4.21631 | opp_overlap 3383581, overlap 3383551 3383546 3383581 AAGTGACGGAAGAAA CGCGCCGTTTCTCC GGT GGGGAAAAAGCCCG CCTGGTGCTGGCATT TERM 4432 3383597 - 3383581 - g 70 -5 -4.56597 | opp_overlap 3383581, overlap 3383555 TCCGGTGGGGAAAAA GCCCGC CTGGT GCTGGC ATTAATCGTCTGGCA TERM 4433 3383711 - 3383735 + G 70 -6.4 -4.2528 | AGTTTGAAGGCGCAT TGGTTGTCGT TTCGC ACGACCGCCA TTTGTTGCGTTCCAC yheS 3382273 - 3384186 + | fused putative transporter subunits of ABC superfamily: ATP-binding components TERM 4434 3384339 - 3384352 + G 70 -4.5 -4.45083 | TGGCAGCGACTGGAG TTGCC CGAC GGCGA TTTTGTCGATCTCGC yheT 3384186 - 3385208 + | putative hydrolase TERM 4435 3385340 - 3385316 - g 78 -8.5 -4.20769 | ACACTTGAACAGAAA GTCGCCGACGT CAA ACGCCAGCTAC AGTGCGGAGAAGCGG yheU 3385202 - 3385420 + | hypothetical protein EFER_3327 3385535 - 3385461 - | hypothetical protein prkB 3385474 - 3386343 + | phosphoribulokinase TERM 4436 3386378 - 3386355 - TR 100 -14 -3.03159 | GTAACTCTGCTAATA TGCCGGATAA ACAA TTATCCGGCA TCGTACTCCTGACAT yhfA 3386802 - 3386398 - | hypothetical protein TERM 4437 3386748 - 3386736 - G 76 -7.7 -4.25104 | TGCCGTCCATTAAAA TCTGG TGA CCAGA TGCGGATTCGCCCAA TERM 4438 3387217 - 3387192 - g 70 -10.5 -2.76171 | overlap 3387189 ACCCATCCAAGAGCA CGCTTATTCAC CAGG GTGAAAAAGCG GAAACGCTGTACTAC crp 3387107 - 3387739 + | DNA-binding transcriptional dual regulator TERM 4439 3387751 - 3387775 + F 100 -16.5 -4.86731 | overlap 3387741 TTAATCCCGTCGGAG TGGCGCGTTAC TGA GTAGCGCGCCA TTTTGTTTCCCCCGA yhfK 3387778 - 3389880 + | conserved hypothetical protein; putative inner membrane protein TERM 4440 3389951 - 3389903 - T 78 -10.2 -3.3573 | opp_overlap 3389903 3389904 3389911 3389940, overlap 3389895 3389883 3389904 TAAACCATCGGATAA GGCGTTTACGTCGCATCCGACA TCTTT TGCCTGATGCGACGCTGACGCG TCTTATTTACGCCCC TERM 4441 3389950 - 3389904 - T 93 -13.7 -2.60956 | opp_overlap 3389904 3389903 3389911 3389940, overlap 3389895 3389883 3389903 AAACCATCGGATAAG GCGTTTACGTCGCATCCGACA TCTTT TGCCTGATGCGACGCTGACGC GTCTTATTTACGCCC TERM 4442 3389904 - 3389950 + T 80 -11.5 -2.72371 | opp_overlap 3389895 3389883 3389903 3389904, overlap 3389903 3389911 3389940 AAACCATCGGATAAG GCGTTTACGTCGCATCCGACA TCTTT TGCCTGATGCGACGCTGACGC GTCTTATTTACGCCC TERM 4443 3389940 - 3389953 + T 72 -8.1 -3.90744 | opp_overlap 3389904 3389903, overlap 3389904 3389903 TCTTTTGCCTGATGC GACGC TGAC GCGTC TTATTTACGCCCCAA argD 3391178 - 3389958 - | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase pabA 3391827 - 3391264 - | aminodeoxychorismate synthase, subunit II fic 3392461 - 3391859 - | stationary-phase protein, cell division TERM 4444 3392156 - 3392170 + g 75 -5.6 -4.70659 | overlap 3392158 CTCCAGATCCTGCAT CAGGGC ATT GCCCTC TTTTTCGATATAAGC TERM 4445 3392158 - 3392168 + g 74 -8.2 -3.96999 | overlap 3392156 CCAGATCCTGCATCA GGGC ATT GCCC TCTTTTTCGATATAA yhfG 3392618 - 3392451 - | hypothetical protein TERM 4446 3392713 - 3392692 - R 100 -17.3 -3.46602 | GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG ppiA 3393295 - 3392723 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4447 3393276 - 3393262 - G 78 -7.8 -4.33907 | opp_overlap 3393275 CAGAAAGAGCGAAAA CAGCTG CAA CAGCCG CCAGGGTCGATTTAA nirB 3393684 - 3396227 + | nitrite reductase, large subunit, NAD(P) H-binding TERM 4448 3396435 - 3396450 + G 70 -6.1 -4.27316 | opp_overlap 3396446 TGTGGGTCGCCAGTC CGCTG AAAAAA CAGCG TTTTCGCTTAAGCGA TERM 4449 3396459 - 3396446 - g 71 -2.3 -5.00884 | opp_overlap 3396435 AGTCCGCTGAAAAAA CAGCG TTTT CGCTT AAGCGACGGTTTATG nirD 3396224 - 3396550 + | nitrite reductase, NAD(P)H-binding, small subunit TERM 4450 3396560 - 3396580 + F 100 -8.9 -4.78752 | overlap 3396561 GGTTAATTGTTTTAA CGGGAGGCG CAA TGCCTCCCC TTTTTGCATTGTCCT TERM 4451 3396561 - 3396579 + F 100 -12.4 -3.46167 | overlap 3396560 GTTAATTGTTTTAAC GGGAGGCG CAA TGCCTCCC CTTTTTGCATTGTCC TERM 4452 3396590 - 3396623 + F 87 -6.2 -5.16472 | gap 1 CTCCCCTTTTTGCAT TGTCCTGTAATG-AC CTTAA GTATATTGCAGGACA TTTTTTAAACTTTTT TERM 4453 3397130 - 3397113 - g 82 -7.7 -4.56597 | opp_overlap 3397113 TCGCGCTGGCAAAAA CCACTGC ACCG GCAATGG TACTGTTCTTCAAAG nirC 3396677 - 3397483 + | nitrite transporter cysG 3397502 - 3398875 + | fused siroheme synthase 1, 3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase ; uroporphyrinogen methyltransferase TERM 4454 3398885 - 3398902 + F 100 -11.3 -4.55128 | opp_overlap 3398884 CATTAATTTAACCAG GGCCAGA GAAT TCTGGCC TTTTCGTTTACAACT yhfL 3399125 - 3399292 + | conserved hypothetical protein; putative secreted peptide TERM 4455 3399332 - 3399359 + T 100 -17 -4.59089 | overlap 3399334 TCGATTTAATTGCCT GACGCCCTCGGG ATTA CCCGAGGGCGTA TTTGTTTCTGAGTTC TERM 4456 3399334 - 3399357 + T 100 -19.6 -3.89305 | overlap 3399332 GATTTAATTGCCTGA CGCCCTCGGG ATTA CCCGAGGGCG TATTTGTTTCTGAGT yhfS 3400484 - 3399399 - | hypothetical protein yhfT 3401800 - 3400496 - | conserved hypothetical protein; putative inner membrane protein TERM 4457 3400999 - 3401020 + g 72 -5.1 -4.58395 | gap 1 TTTGTGATTGTTCCG GCGTTACACC TGC GGAGT-ACGC TTTTTCCAGGGTGAA yhfU 3402165 - 3401812 - | hypothetical protein php 3403054 - 3402176 - | putative hydrolase yhfW 3404277 - 3403051 - | putative mutase TERM 4458 3403564 - 3403578 + g 84 -7.8 -4.72272 | CACTTGATGCAGTTG GTGCGG CAC CTGCAC TTTTTCATCGACGCC yhfX 3405440 - 3404277 - | putative amino acid racemase TERM 4459 3405202 - 3405224 + g 71 -3.2 -4.82901 | opp_overlap 3405200, overlap 3405204 TCCACCGCCACAATG CCGCTGTAGC CCA GCGCCAGCAG TTTTTCTGCCAGCCA TERM 4460 3405464 - 3405478 + r 80 -2.9 -5.54264 | opp_overlap 3405473, overlap 3405473 CTCGTTTCTGTTCCT TGAAT TAAAT ATTCA TTTTTTTGAATATTT yhfY 3405886 - 3405524 - | hypothetical protein yhfZ 3406808 - 3405903 - | hypothetical protein TERM 4461 3406339 - 3406349 + g 71 -2.4 -4.9792 | CCCAACTCCAGCGCG AGGC ATA GCCC TTTTTGTGTGAGATA TERM 4462 3406935 - 3406948 + r 100 -9.5 -4.67904 | opp_overlap 3406935 AAGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG TERM 4463 3406948 - 3406935 - R 100 -9.5 -5.70829 | opp_overlap 3406935 AAGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG trpS 3407973 - 3406969 - | tryptophanyl-tRNA synthetase gph 3408724 - 3407966 - | phosphoglycolate phosphatase rpe 3409394 - 3408717 - | D-ribulose-5-phosphate 3-epimerase dam 3410248 - 3409412 - | DNA adenine methylase TERM 4464 3410132 - 3410111 - G 100 -13.1 -4.60073 | overlap 3410126 GATATAACGAGAAAA GTCGGTGTT AAGA AACACCGAC CCGGCACCCACAAAG TERM 4465 3410171 - 3410182 + g 70 -3.6 -4.67943 | opp_overlap 3410158, overlap 3410158 CAGGCATTCACCTTG TGGC AAAT GCCG TTTTATATCTTCAAG damX 3411645 - 3410365 - | hypothetical protein TERM 4466 3410515 - 3410533 + g 70 -10.4 -3.26237 | overlap 3410513 3410512 CGGTTGACCGTTACG TGTTGTCT CAT AGACAACA TAATTTTTCAGGTTC TERM 4467 3410847 - 3410859 + g 74 -2.6 -5.05782 | TCGACTCTGTTTTCG CCGT TGCTT GCGG TTTTTTCGGCTCAAT TERM 4468 3411721 - 3411702 - R 100 -9.2 -4.86621 | opp_overlap 3411699 ATCCCGAAGCAAAAA GACCCCCG GATA CGGCGGTC TGACCTTTCTTGTTT aroB 3412825 - 3411737 - | 3-dehydroquinate synthase TERM 4469 3412472 - 3412458 - G 70 -4.2 -4.68103 | GGAACCTGAATAAAA CGAACG CCT CGTTGG TAGCTGGCTGCCGCA TERM 4470 3412771 - 3412749 - G 78 -10.6 -3.5456 | overlap 3412745 3412767 AACGGTAAGAATGAA GCCGGTTCGT TAA ACAAACCAGC CGCGATGGTAATAGG aroK 3413404 - 3412883 - | shikimate kinase I TERM 4471 3413193 - 3413209 + g 74 -2.2 -5.07486 | overlap 3413192 3413194 ATACCCTGTTTTTCC GTCAAC TCGTT GATGAC TTTTTCTTCGCGATC TERM 4472 3413874 - 3413851 - R 71 -3.1 -5.0538 | opp_overlap 3413854, overlap 3413853 3413854 GTTCAGCGCAAAAAA CATCTCGTG TTTATG CACGAGTTA CTCGCTGGAGACCAG hofQ 3415152 - 3413872 - | fimbrial transporter EFER_3358 3415426 - 3415022 - | hypothetical protein EFER_3359 3416024 - 3415416 - | hypothetical protein EFER_3360 3416397 - 3415858 - | hypothetical protein TERM 4473 3416121 - 3416148 + gr 86 -9.1 -4.29325 | CAGGCTGCCAGTTGC CGGTTGCAGCA AGCTCC TGCTGCCGCCG TTTTGCCTGTTGATG TERM 4474 3416195 - 3416217 + gr 81 -9.1 -4.02817 | AAAAGCCGTGGTTTG CTCGCCTGT AAAGC ACTGGCGAG TTGTTGTTCTGCCAG yrfD 3417221 - 3416397 - | putative pilus assembly protein TERM 4475 3417611 - 3417623 + G 90 -9.1 -4.4648 | overlap 3417608 GATCTTCCGTGCCGC CAGCG TTG CGCTG TTTTCTGGTCACGCT mrcA 3417297 - 3419849 + | fused penicillin-binding protein 1a: murein transglycosylase ; murein transpeptidase TERM 4476 3419871 - 3419858 - T 100 -9.5 -5.26875 | opp_overlap 3419858 GTTCTAATTAAAAAA GGCGC CTCG GCGCC TTTTTTAATGCTAAA TERM 4477 3419858 - 3419871 + T 100 -9.5 -5.1861 | opp_overlap 3419858 GTTCTAATTAAAAAA GGCGC CTCG GCGCC TTTTTTAATGCTAAA nudE 3420542 - 3419982 - | ADP-ribose diphosphatase TERM 4478 3420042 - 3420026 - G 72 -6.5 -4.30576 | opp_overlap 3420025 3420026 CGCGCACGAGGAAAA GCGCACT GAC ATTGCGC GCTTCATTGAAGTCA TERM 4479 3420708 - 3420720 + H 74 -6.9 -4.40894 | overlap 3420699 GAATTTGCTGATATT CCGCC TTT GGTGG TTTTGCTATGCTTTG TERM 4480 3422410 - 3422391 - g 82 -3.4 -5.1861 | overlap 3422393 CGTACGATTAAAAAA TGCCCTGG TCAA CCTGGGTA ATAGTAAAGACTGGG igaA 3420865 - 3423000 + | intracellular growth attenuator protein TERM 4481 3423042 - 3423001 - f 78 -9.5 -3.67775 | gap 1, opp_overlap 3423005, overlap 3423004 AGCCTTATTGAATAA CACGTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT-TG CTTCACTCTGGAGAT TERM 4482 3423040 - 3423004 - f 88 -12.3 -2.64872 | opp_overlap 3423005, overlap 3423001 CTTATTGAATAACAC GTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT TGCTTCACTCTGGAG TERM 4483 3423005 - 3423039 + F 100 -18 -3.39142 | opp_overlap 3423004 3423001 TTATTGAATAACACG TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA yrfG 3423065 - 3423733 + | putative hydrolase TERM 4484 3423789 - 3423799 + G 75 -4.6 -4.82901 | CTGGATAAATGGCTA TGGG CCG CCCG TTTTTATAAAACCCG hslR 3423744 - 3424145 + | ribosome-associated heat shock protein Hsp15 TERM 4485 3424153 - 3424131 - f 71 -9.9 -2.65116 | overlap 3424128 TTACGATTTAAACAC GGCGACAGT GAATA ACTGTCACC TGCAAGAGAGATGAT TERM 4486 3424497 - 3424472 - g 83 -10.4 -4.12942 | opp_overlap 3424471 CGAAATTCCGGAAAA TGCCGACCTG AAAACG CTGGTCGGCA ATGGTTACGTGGTGA hslO 3424170 - 3425048 + | heat shock protein Hsp33 TERM 4487 3425050 - 3425087 + T 100 -15.7 -3.29109 | opp_overlap 3425052 3425057, overlap 3425040 3425052 3425056 CGCAAGTACATTAAT CATGAAATCCGGCAGAG ATAA CTCTGCCGGACTTCATC TTAATATGACCTTTT TERM 4488 3425085 - 3425052 - T 100 -20.5 -2.83233 | opp_overlap 3425050 3425040 3425052 3425056, overlap 3425057 CAAGTACATTAATCA TGAAATCCGGCAGAG ATAA CTCTGCCGGACTTCA TCTTAATATGACCTT TERM 4489 3425052 - 3425085 + T 100 -18.3 -3.20345 | opp_overlap 3425052 3425057, overlap 3425050 3425040 3425056 CAAGTACATTAATCA TGAAATCCGGCAGAG ATAA CTCTGCCGGACTTCA TCTTAATATGACCTT TERM 4490 3425056 - 3425081 + T 100 -13.3 -3.40907 | opp_overlap 3425052 3425057, overlap 3425052 3425050 3425040 TACATTAATCATGAA ATCCGGCAGAG ATAA CTCTGCCGGAC TTCATCTTAATATGA TERM 4491 3425080 - 3425057 - T 100 -16.8 -3.86106 | opp_overlap 3425056 3425052 3425050 3425040, overlap 3425052 ACATTAATCATGAAA TCCGGCAGAG ATAA CTCTGCCGGA CTTCATCTTAATATG yhgE 3426821 - 3425088 - | conserved hypothetical protein, putative inner membrane protein TERM 4492 3426524 - 3426510 - G 90 -5 -5.38326 | GCAACCAAATAAAAA CAGCAT CTC ATACTG TTGCCACCTGTCCAT TERM 4493 3426650 - 3426635 - G 75 -5.4 -4.64861 | GTTGTTTAAAAGAAA CCACTG TAAG CAGTAG CGTTAGCGAAATAGC TERM 4494 3428263 - 3428296 + G 81 -9.5 -4.02334 | gap 1 ACTAAAGTTATCTTC CTGACCGCAG-ACGCC TTT GGCGTACTGCCGCCGG TTTCTCGTCTGACTG TERM 4495 3428779 - 3428760 - g 73 -11.4 -2.59797 | overlap 3428759 3428757 TTTCGATAAATACAC CGACACCC CAGC GGGTGCCG CGCTGGTAGAAGCAG pck 3427186 - 3428808 + | phosphoenolpyruvate carboxykinase TERM 4496 3428828 - 3428851 + F 100 -15.4 -5.43414 | CTGATATCTAACTGG CCCCTTATCC AAAC GGATAAGGGG TTTTTTATATCTAAT EFER_3370 3428924 - 3429241 + | hypothetical protein EFER_3371 3429299 - 3429595 + | putative HTH-type transcriptional regulator yiaG TERM 4497 3429594 - 3429625 + T 95 -11.7 -3.75845 | opp_overlap 3429599, overlap 3429599 AATTGAAAACAATCT AAAAACAGGAGGC ACCTTC GCCTCCTGTTTTA TTTACCCTTCTTTTG TERM 4498 3429599 - 3429620 + T 100 -11.6 -4.90525 | opp_overlap 3429599, overlap 3429594 AAAACAATCTAAAAA CAGGAGGC ACCTTC GCCTCCTG TTTTATTTACCCTTC TERM 4499 3429620 - 3429599 - T 100 -12.3 -4.85195 | opp_overlap 3429599 3429594 AAAACAATCTAAAAA CAGGAGGCA CCTT CGCCTCCTG TTTTATTTACCCTTC envZ 3430979 - 3429627 - | sensory histidine kinase in two-component regulatory system with OmpR TERM 4500 3430924 - 3430892 - G 73 -12 -2.73443 | overlap 3430891 GCACCACCAGATAAG TCGTCACCAGGCTG ACGAA CAGCAAGGTGACGA TGAGCAATAACGTAC ompR 3431695 - 3430976 - | DNA-binding response regulator in two-component regulatory system with EnvZ greB 3431923 - 3432399 + | transcription elongation factor TERM 4501 3434389 - 3434368 - g 84 -7.9 -4.62904 | gap 1, opp_overlap 3434378 3434379, overlap 3434359 3434356 3434369 3434371 AAAGAGCTGGAAAAA CCAGGTCGCG ATC CGCGTCC-GG AATTTAAAACCGCCC TERM 4502 3434747 - 3434718 - g 70 -5.6 -4.4017 | overlap 3434737 3434738 TGAACGTTCACAAAA CAACCGCCCGGC AGCCAA ACCACGCGGTCG TGAAGCGCAGCCTAC yhgF 3432496 - 3434817 + | transcriptional accessory protein TERM 4503 3434924 - 3434892 - f 86 -12.1 -3.00476 | opp_overlap 3434898 3434899, overlap 3434897 3434898 3434899 ACGCCTAACGAGACA TAAAAGTGCCGGAGA ATA TCTCCGGCCTTTTTA TTCCACAGCGAAACT TERM 4504 3434918 - 3434897 - f 100 -10.9 -4.64591 | gap 1, opp_overlap 3434898 3434899, overlap 3434892 3434898 3434899 TAACGAGACATAAAA GTGCCGGAGA ATA TCTCCGGC-C TTTTTATTCCACAGC TERM 4505 3434918 - 3434898 - f 81 -11.1 -3.3767 | opp_overlap 3434898 3434899, overlap 3434897 3434892 3434899 AACGAGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAGC TERM 4506 3434898 - 3434918 + F 100 -11.1 -5.06414 | opp_overlap 3434897 3434898 3434892 3434899, overlap 3434899 AACGAGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAGC TERM 4507 3434899 - 3434917 + F 100 -14.6 -3.63367 | opp_overlap 3434899 3434897 3434898 3434892, overlap 3434898 ACGAGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAG TERM 4508 3434917 - 3434899 - f 100 -14.6 -2.61517 | opp_overlap 3434898 3434899, overlap 3434897 3434898 3434892 ACGAGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAG feoA 3435254 - 3435481 + | ferrous iron transporter, protein A TERM 4509 3436345 - 3436356 + G 74 -5.8 -4.53036 | TGCTCAACCGTTTCC TCGG TCTG CCGA TTTTCCTCTTTGTGA TERM 4510 3437128 - 3437110 - g 77 -8.2 -4.11216 | CGCTGAGCGGGAAAA TCGTCGAT AAC ATCAACGA CTCGGCACTGGCTTC feoB 3435498 - 3437819 + | fused ferrous iron transporter, protein B: GTP-binding protein ; membrane protein yhgG 3437819 - 3438055 + | putative DNA-binding transcriptional regulator TERM 4511 3438081 - 3438105 + F 100 -12.2 -5.08824 | gap 1, opp_overlap 3438081 CTACCTGTTTTGAAA GCCCGGTATGC GTTT GCA-ACCGGGC TTTTTTGCGTGCGGC TERM 4512 3438105 - 3438081 - f 91 -12.2 -3.53444 | gap 1, opp_overlap 3438081 CTACCTGTTTTGAAA GCCCGGTATGC GTTT GCA-ACCGGGC TTTTTTGCGTGCGGC TERM 4513 3438145 - 3438133 - f 80 -6.3 -4.82901 | GGCTTTCCATAAAAA TGCAA CTC TTGCA GTACAACGTAAGTTC TERM 4514 3438284 - 3438268 - g 71 -2.9 -4.77036 | overlap 3438271 CGCCATGAGCAAAAA GCAGAGT TCC ACCCCAC ATGATGCACTGTTCA yhgA 3438257 - 3439150 + | putative transposase TERM 4515 3439329 - 3439355 + T 76 -10.8 -2.72829 | overlap 3439328 AGAAGAGTTGGCTGC GGCGAGCCAGTA AAG TTCTGTCTCGCC ATTTCAACAGCTGTC bioH 3440140 - 3439370 - | carboxylesterase of pimeloyl-CoA synthesis TERM 4516 3439443 - 3439430 - G 70 -5.2 -4.44046 | opp_overlap 3439430 CGGATGCGAAATAAA CGGC GCATGG GCCG CTTTGGCGAAGATGT TERM 4517 3440001 - 3439976 - G 72 -8.9 -3.75665 | CGACATCGCACCAAA TCCCCGGCTGC GCCC GAAGCCGGGCA GATCAACAAGGTGCA gntX 3440178 - 3440861 + | gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system gntY 3440921 - 3441496 + | putative gluconate transport associated protein TERM 4518 3441516 - 3441547 + F 86 -12.2 -3.19091 | overlap 3441525 CCCCTTTTGTAGATT GCCCGATGCGACGC TAAA GCGCCTTATCGGGC TTACTCCATCCCTGT gntT 3441813 - 3443129 + | gluconate transporter, high-affinity GNT I system TERM 4519 3443168 - 3443133 - T 76 -9.8 -3.32963 | gap 1, overlap 3443135 3443136 ATGGTGATTTGATAA CACTGACTGCCGGATGC ATC GCATCCGGCA-TCAACC GCACTCTATTTCTTC TERM 4520 3443166 - 3443135 - T 100 -14.6 -3.23393 | gap 1, overlap 3443133 3443136 GGTGATTTGATAACA CTGACTGCCGGATGC ATC GCATCCGGCA-TCAA CCGCACTCTATTTCT TERM 4521 3443165 - 3443136 - T 100 -15.9 -2.53822 | gap 1, overlap 3443135 3443133 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGGCA-TCA ACCGCACTCTATTTC malQ 3445258 - 3443174 - | 4-alpha-glucanotransferase (amylomaltase) TERM 4522 3443273 - 3443285 + g 74 -3.3 -4.93296 | opp_overlap 3443252 3443273 AAGCGTTGCGGAAAG CTTGC GTC GCCAG TTTTTGTACTGGTAG TERM 4523 3444211 - 3444197 - G 74 -10 -3.56092 | overlap 3444198 CCAGCAGGCGGCAAA CTGGCT GTA AGCCAG CCACTGTAACCAGAG TERM 4524 3445052 - 3445062 + g 82 -2.4 -5.42259 | overlap 3445037 3445057 GCCGCTGCCCTCCAC CGCC ATC GGCA TTTTTTTGCCGCTGG TERM 4525 3445103 - 3445129 + g 85 -13.1 -3.18582 | gap 1, overlap 3445100 3445099 3445120 3445121 GACATTCGGGACTGG CGTTACCGCCAC TTTC GTGGCGGTA-CG TTGATGCATCGCGTC malP 3447661 - 3445268 - | maltodextrin phosphorylase TERM 4526 3446178 - 3446194 + g 70 -3.7 -4.62872 | TATTGCTGACGGAAT TTCGC GTCATCA GCGAA TTTTTCCAGATTGAT TERM 4527 3447018 - 3447006 - G 76 -9.1 -3.85698 | overlap 3447010 GTCGCTTGCCATAAA CGCAG CGG CTGCG CCACGCCGTTACGGT TERM 4528 3448619 - 3448644 + G 71 -11.1 -2.93817 | opp_overlap 3448617, overlap 3448616 ATTGTTTATCGAACT GGCAGAGTGGC ATCA GCCGCTCTACC TGGTTATTGACGATT TERM 4529 3449119 - 3449092 - g 70 -7 -4.07687 | opp_overlap 3449092 ATTTTCTGTTGAAAA GCGCCATTCTTC GTTC AATGAATGACGC TCTCATTACCCGCGT malT 3448272 - 3450977 + | fused conserved hypothetical protein ; DNA-binding transcriptional activator, maltotriose-ATP-binding rtcA 3452036 - 3451020 - | RNA 3'-terminal phosphate cyclase TERM 4530 3451786 - 3451770 - G 79 -10.1 -3.84825 | GCTACCGATAGCAAA GCGGTAG TCG CCACCGC GCACGGTACCGGGCC rtcB 3453266 - 3452040 - | hypothetical protein TERM 4531 3453169 - 3453156 - G 77 -5.9 -4.65263 | opp_overlap 3453154 3453156 ATGTTTGAAAATAAA CGGCA TCTT CGCCG TATTAATAAGTTGCT rtcR 3453455 - 3455053 + | sigma 54-dependent transcriptional regulator of rtcBA expression glpR 3455793 - 3455035 - | DNA-binding transcriptional repressor TERM 4532 3455547 - 3455559 + g 74 -2.6 -5.12068 | opp_overlap 3455529 GCTCCGCCACTTTGC GGGC AATAC GCTC TTTTTCTTCGGTCTG glpG 3456640 - 3455810 - | putative intramembrane serine protease TERM 4533 3456614 - 3456596 - G 72 -5.8 -4.33621 | overlap 3456592 3456598 CATGTAATCAACAAA CGCCTGCG CCA CGCGGGGG TTAGCAAAAGAGGTA glpE 3457011 - 3456685 - | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 4534 3457151 - 3457166 + H 74 -7.6 -3.95219 | opp_overlap 3457151 GATTCTTTGCTAATA TGTTCG ATAA CGAACA TTTATGAGCTTTAAC glpD 3457201 - 3458706 + | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding EFER_3395 3459190 - 3458738 - | hypothetical protein EFER_3396 3460255 - 3459203 - | putative ankyrin repeat protein EFER_3397 3461900 - 3460335 - | putative transporter component TERM 4535 3460935 - 3460947 + g 77 -3.3 -5.06116 | ATTTAATTTGACGCT TGCTG CTT CTGCA TTTTGTTGTTGTTTT TERM 4536 3461350 - 3461339 - G 87 -4.4 -5.29445 | opp_overlap 3461339 GGGCAAGAATAAAAA TCAC AAGA GTGA TGATATTACGACCAT TERM 4537 3461813 - 3461795 - G 79 -10.4 -3.7732 | CCGTCAGACCAAGAA GCATTAGT ACG ACTAATGC TACCAAATGGGTCAT EFER_3398 3463185 - 3462034 - | putative fimbrial adhesin EFER_3399 3463978 - 3463178 - | putative periplasmic pilin chaperone TERM 4538 3463795 - 3463805 + gr 70 -4 -4.62069 | TAACCAGCATATCTT TACT GGC AGTA TTTTTAAGCTCGACC EFER_3400 3464444 - 3463920 - | putative exported fimbrial-like adhesin protein TERM 4539 3464104 - 3464093 - GR 72 -4.4 -4.72272 | TGTTGTTATCAAAAA TAGC CAGT GCTA ACCCATCGACTGAGC EFER_3401 3465024 - 3464452 - | putative fimbrial minor structural subunit TERM 4540 3464547 - 3464557 + g 70 -6.8 -4.1023 | opp_overlap 3464546 3464547 GTTTAAAGGTTAAAC TGGC ATC GCCA TTATTATTTAAAATT EFER_3402 3467606 - 3465015 - | putative outer membrane export usher protein aufC TERM 4541 3465971 - 3465983 + g 74 -6.3 -4.51224 | opp_overlap 3465968 TATTATAGCCAACCT GATAC AAG GTATC TTTATTATTCGTATT EFER_3403 3468399 - 3467647 - | putative fimbria chaperone protein precursor TERM 4542 3468369 - 3468379 + g 74 -2.6 -5.05782 | TAATGTTTCTATTCG TAAA ACA TTTA TTTTTTGAAATCCAT TERM 4543 3468505 - 3468476 - R 81 -10.9 -3.39187 | opp_overlap 3468476 AACACGTAATATTAA TTTCAGGCTACAA ATAA CTGTAACCTGAAA TTTTCTTGCGTAATT TERM 4544 3468476 - 3468505 + r 86 -8 -4.69656 | opp_overlap 3468476 AACACGTAATATTAA TTTCAGGCTACA AATAAC TGTAACCTGAAA TTTTCTTGCGTAATT aufA 3469223 - 3468519 - | Auf fimbriae major fimbrial subunit AufA TERM 4545 3469416 - 3469402 - R 84 -3.6 -5.47399 | overlap 3469403 TTAACTCTAAAAAAA CTGATT CGC AATCAA TGGTTTTAAATTATA TERM 4546 3469467 - 3469453 - R 86 -2.8 -5.78622 | overlap 3469455 CCACTTGAAAAAAAA GAGAAT TAC ATTCAC CAGAGTAATTAAACC TERM 4547 3469650 - 3469696 + r 73 -9.7 -2.92668 | opp_overlap 3469651 3469687 TACCAATACAAAAAA ATGCCGTGTG-TTCCATTAAAGA TAA TCTTTA-TGGAAACACCCGGCAG TGTCATTAGGTAATA TERM 4548 3469695 - 3469651 - R 100 -13.7 -5.82172 | opp_overlap 3469650, overlap 3469687 ACCAATACAAAAAAA TGCCGTGTGTTCCATTAAAGA TAA TCTTTATGGAAACACCCGGCA GTGTCATTAGGTAAT glgP 3472160 - 3469713 - | glycogen phosphorylase TERM 4549 3470751 - 3470763 + g 74 -10.5 -3.19157 | overlap 3470754 AGCCAGCCAGCGACG CGGCG TTA CGCCG TTCGTCACGTTGGTA glgA 3473613 - 3472180 - | glycogen synthase TERM 4550 3472628 - 3472617 - G 70 -7.2 -4.07687 | ACCCTTCCTGCAAAA CGGG GTCG CCCG CGCCGAGAAGAGCGA glgC 3474908 - 3473613 - | glucose-1-phosphate adenylyltransferase TERM 4551 3474417 - 3474431 + g 95 -10 -4.60487 | opp_overlap 3474416 TGGCATACAAGCTAC GGTGCA ACG TGCACC TTTTTCGACGTGGTC TERM 4552 3474710 - 3474698 - G 70 -10.5 -2.71731 | GGTATTGCGTAATCA CGCCG ATA CGGCG AATACCGGAGTTAAT glgX 3476900 - 3474924 - | glycogen debranching enzyme TERM 4553 3475029 - 3475006 - G 71 -9.6 -3.53012 | TCCTCTCCGGCGAAA GGAGGAATAG CGCG CCATTCCCCC TCGGGCAGAACAATA TERM 4554 3475759 - 3475740 - G 72 -7.8 -3.91716 | opp_overlap 3475741, overlap 3475741 CCACTCCGCAAACAA CGGTGGGA AATT TCCCACCT GATATCCACCTTCGC TERM 4555 3475741 - 3475758 + g 73 -11.3 -2.63631 | opp_overlap 3475740 3475741 CACTCCGCAAACAAC GGTGGGA AATT TCCCACC TGATATCCACCTTCG TERM 4556 3475758 - 3475741 - G 75 -11.3 -2.94708 | opp_overlap 3475741, overlap 3475740 CACTCCGCAAACAAC GGTGGGA AATT TCCCACC TGATATCCACCTTCG TERM 4557 3475878 - 3475844 - G 71 -3.2 -4.79223 | overlap 3475845 3475846 GGATAGCAGTAAAAA GTGGTGCGTCCTGGCG AAA CGCCGGAGTGCGCCCC ATTACCGATGCCAAA TERM 4558 3475917 - 3475906 - G 75 -4.4 -4.74084 | AAATCAAAACGAAAA CCAT CAAC ATGG CAGGTTTCAACCCAG glgB 3479083 - 3476897 - | 1,4-alpha-glucan branching enzyme TERM 4559 3478360 - 3478378 + g 79 -3.8 -5.09173 | CATAAATAGAGATTG GTGCATCA AAC TGATTCGC TTTTTTGCGCTCTTC TERM 4560 3478981 - 3478995 + g 72 -5.7 -4.48221 | ATAGGGCGCGGACTT CCAAC CCGGC GTTGG TTTTGTGCATTCCTA TERM 4561 3479335 - 3479318 - R 100 -11.3 -5.48825 | TATTACGCAAAAAAA GGGGTGA CCCG TCACCCC TGGAAAAGAAAGAAA asd 3480565 - 3479354 - | aspartate-semialdehyde dehydrogenase, NAD(P)-binding yhgN 3480650 - 3481243 + | putative antibiotic transporter TERM 4562 3481291 - 3481266 - T 100 -12.6 -3.63922 | overlap 3481264 AGTTTTTCGAAAAGA GCCCGGTAGC GTCACA ACTACCGGGC GAACAAACTTAACTC gntU 3482640 - 3481300 - | gluconate transporter, low affinity GNT 1 system TERM 4563 3482615 - 3482587 - G 73 -3.9 -4.77036 | overlap 3482589 3482590 CTTCATGACTAAAAA CAGCAGCAG TAAAACAGACC CTACTGCTG TTAAAACAAGCGTTA gntK 3483171 - 3482644 - | gluconate kinase 2 ; gluconate transport, GNT I system gntR 3484305 - 3483310 - | DNA-binding transcriptional repressor TERM 4564 3484034 - 3484046 + g 73 -9.1 -3.6502 | opp_overlap 3484029 GTCTGATAACCGTGT GCGTC GGT GACGC TTTCGATACCGCGTA TERM 4565 3484384 - 3484363 - R 83 -10.9 -3.42699 | opp_overlap 3484363 ACGGACGCATCAGAA CCTTCCCGA TTCC TCAGGAAGG TTGTGAGATAAATTT TERM 4566 3484363 - 3484384 + r 71 -8.7 -3.34236 | opp_overlap 3484363 ACGGACGCATCAGAA CCTTCCCGA TTCC TCAGGAAGG TTGTGAGATAAATTT yhhW 3485093 - 3484398 - | hypothetical protein yhhX 3486253 - 3485216 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 4567 3486396 - 3486380 - H 100 -9.4 -6.10489 | AAGGTCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAATACTGGAA yhhY 3486587 - 3487075 + | putative acetyltransferase TERM 4568 3487088 - 3487104 + F 79 -6.7 -4.6635 | opp_overlap 3487090 TGAACATCATTAACT TATTGTA AAT TACAATA TTTTATTAAGGCTTT yrhB 3487185 - 3487469 + | hypothetical protein TERM 4569 3487503 - 3487473 - T 100 -14.9 -3.28712 | gap 1, opp_overlap 3487470, overlap 3487475 GGCTTGCCCTGACAA TA-CGGCCCTCTTC CCAC GAAGAGGGCCGCTA ACCTTAGTACCCCGC TERM 4570 3487500 - 3487475 - T 100 -19.1 -3.21276 | opp_overlap 3487470, overlap 3487473 CTTGCCCTGACAATA CGGCCCTCTTC CCAC GAAGAGGGCCG CTAACCTTAGTACCC ggt 3489318 - 3487507 - | gamma-glutamyltranspeptidase TERM 4571 3488755 - 3488767 + g 71 -9.1 -3.51934 | opp_overlap 3488755, overlap 3488753 CACCACTTTATTCAA CGGCA TGG TGCCG TATTTCTCCAGCGCC TERM 4572 3489226 - 3489243 + g 90 -9.1 -4.51699 | AGTAGCAATGGCCAC CCGGCGT AAAA ACGTCGG TTTTATCATCGTTAT TERM 4573 3489395 - 3489408 + G 72 -8.1 -3.95219 | overlap 3489405 GACTTCTGCTTTTGA CGGCA CTCC TGCCG TTTGTCGGCTTTGCA TERM 4574 3489780 - 3489747 - g 81 -9.5 -4.0162 | GCCGGAGAGGAGAAA CGGCGACATGCTGAA TCCG CCCAGCACGCCGCAG CCTGATATTCCGTTG yhhA 3489373 - 3489813 + | hypothetical protein ugpQ 3490543 - 3489800 - | glycerophosphodiester phosphodiesterase, cytosolic TERM 4575 3489894 - 3489859 - G 73 -11.8 -2.56571 | gap 1, opp_overlap 3489861, overlap 3489855 TACAGATGCAATCCA CGCCCCAGCGCAGCAAC TCT GTCGC-GCGCTGGGGTT TGTTGACGGTATAAA TERM 4576 3489861 - 3489892 + g 100 -16.6 -4.17556 | gap 1, opp_overlap 3489859 3489855 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GTCGC-GCGCTGGGG TTTGTTGACGGTATA ugpC 3491610 - 3490540 - | glycerol-3-phosphate transporter subunit ; ATP-binding component of ABC superfamily TERM 4577 3490935 - 3490913 - G 72 -6.2 -4.37886 | opp_overlap 3490912 3490913, overlap 3490915 GGACTGCCGATAAAA CTCGCCAC AAACAGA GTGGCGGG CTTTTCGTAGACTTC TERM 4578 3491230 - 3491208 - G 78 -9.1 -3.87815 | GCTGACCGCCAGAAA GCTCACGCG GACGG CGCTTGAGC AGGTCGTCCAGCTCC ugpE 3492457 - 3491612 - | glycerol-3-phosphate transporter subunit ; membrane component of ABC superfamily ugpA 3493341 - 3492454 - | glycerol-3-phosphate transporter subunit ; membrane component of ABC superfamily ugpB 3494755 - 3493439 - | glycerol-3-phosphate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 4579 3493648 - 3493658 + g 71 -2.4 -4.91109 | overlap 3493635 GACGCGTCGCGGTAT CCGC CCC GGGG TTTTTCTCGTAAAAG TERM 4580 3493837 - 3493850 + g 72 -5.9 -4.38154 | overlap 3493848 CCCACAGGCTGGCCC CGCCG ATAA TGGCG TTTTGTGGCGCATCT TERM 4581 3494783 - 3494796 + r 70 -5.2 -4.46212 | opp_overlap 3494781 3494793, overlap 3494782 TTGTTGTACCGAATG CGCG AATTCA CGCG TTTTATGCTCGCGGG TERM 4582 3494987 - 3494957 - R 74 -6.1 -4.57569 | opp_overlap 3494957 3494958, overlap 3494961 CTACGTTGGGAAAAA TTAATGCGCCAGA GACTA TCTGGCGCAGCAC TTATCGAACAATACT TERM 4583 3494983 - 3494961 - R 100 -13.5 -3.80855 | opp_overlap 3494958 3494957, overlap 3494957 GTTGGGAAAAATTAA TGCGCCAGA GACTA TCTGGCGCA GCACTTATCGAACAA EFER_3426 3495734 - 3494988 - | hypothetical protein TERM 4584 3495205 - 3495218 + g 79 -2.3 -5.18726 | ACCTCAAACTCGCTT TCCGC ATCA GCGTA TTTTTCTTGTGCGGC TERM 4585 3495841 - 3495819 - R 79 -8.4 -4.10188 | opp_overlap 3495819 TATACGGACAAAGAA CCCGGCAG AACGTGA CTACCGGG TTATTGATAATTTAC livF 3496566 - 3495853 - | leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily livG 3497335 - 3496568 - | leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily TERM 4586 3496845 - 3496816 - G 72 -6.3 -4.30576 | CGTCGAGCATTAAAA TCTCCGGCTGCGT TACC ATGCAGCGGGCGA TCTCCAGACGGCGCT livM 3498609 - 3497332 - | leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily TERM 4587 3497488 - 3497467 - G 71 -9.4 -3.55444 | GCTGTATTCGTTAAA GTCGCGCA TCAATT CGCGCGAC ACCACCAGCAGAACT livH 3499532 - 3498606 - | leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily TERM 4588 3499413 - 3499397 - G 83 -10.1 -4.08706 | opp_overlap 3499397 TGCCGATCATATAAA CCTCGCC GTG GGCGAAG TTGATCATGCCGATA TERM 4589 3499571 - 3499551 - R 100 -12.5 -4.09739 | GTAACCTTTCTAAAA CCGCCCGCA TTT CACGGGCGG TGGGATGATCACTTG livK 3500689 - 3499580 - | leucine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 4590 3500033 - 3500047 + g 74 -2.8 -5.00616 | opp_overlap 3500033 ACCGCCGTAGTAAAC GAAATC GAT GTTTTC TTTTTTCAGGCGGGC TERM 4591 3500925 - 3500897 - H 91 -5.3 -5.59879 | overlap 3500922 GATAAACAGAAAAAA GTGCCGTTGTC AGCATAA AATAACGGCAC AAAGGGCGGAATAAT TERM 4592 3501057 - 3501047 - H 88 -3.2 -5.88476 | AAAAGAAATAAAAAA GAGA AAG CCTC CGATTAAATTATTTC yhhK 3501113 - 3501496 + | hypothetical protein TERM 4593 3501670 - 3501688 + T 74 -10.3 -2.5785 | opp_overlap 3501661 3501665, overlap 3501669 ATATTAGCAATTTGG CGGCAAC CCAAA GTTGCCG ATTAATGATTACTTC livJ 3502800 - 3501697 - | leucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 4594 3502528 - 3502539 + g 70 -5.8 -4.15044 | GACATATTTAATGCC GTCG TTAA CGAC TTTGTTCGCCACCGC TERM 4595 3503050 - 3503031 - R 100 -7.8 -5.75538 | opp_overlap 3503031 CCCAAAAAATAAAAA CCCCGGAC TCTC ATCCAGGG TTCTCTGCTTAACAG rpoH 3503926 - 3503072 - | RNA polymerase, sigma 32 (sigma H) factor ftsX 3505229 - 3504171 - | transporter subunit: membrane component of ABC superfamily TERM 4596 3504855 - 3504877 + g 77 -3.3 -5.03314 | gap 1 CTGTGCCACCACGCC CGCAGCGGCG TCAT CGTC-CAGCG TTTTTTGCAGATAAA ftsE 3505890 - 3505222 - | transporter subunit: ATP-binding component of ABC superfamily ftsY 3507431 - 3505893 - | fused Signal Recognition Particle (SRP) receptor: membrane binding protein ; conserved hypothetical protein TERM 4597 3506315 - 3506305 - G 72 -8.2 -3.83921 | opp_overlap 3506300 TCGAAGATAACAGAA GCGG AAT CCGC ACCGGTATGCTGGGC TERM 4598 3507603 - 3507590 - gH 87 -4.5 -5.1861 | TTTATCATGAAAAAA CCGAA TCAT TCCGG CAGCGGCCAAATCCG yhhF 3507581 - 3508177 + | putative methyltransferase TERM 4599 3508355 - 3508391 + GT 75 -8.9 -3.62572 | gap 1, opp_overlap 3508338 3508354, overlap 3508358 TGGCCCGCAGATGAC CACCGCCGAAAAGG TGCGCATTTT CCTTTTCGGCG-TG TTTGAACTGCTGGTC TERM 4600 3508358 - 3508389 + GT 86 -11.7 -3.39018 | opp_overlap 3508354, overlap 3508355 CCCGCAGATGACCAC CGCCGAAAAGG TGCGCATTTT CCTTTTCGGCG TGTTTGAACTGCTGG EFER_3439 3508044 - 3508436 + | hypothetical protein yhhM 3508798 - 3508439 - | hypothetical protein TERM 4601 3509170 - 3509184 + G 78 -5.6 -4.8048 | overlap 3509172 CGTCAACGTCTGATG TACGCC ATC GGCGCA TTTTTCCTCTCGCAC yhhN 3508939 - 3509565 + | conserved hypothetical protein; putative inner membrane protein TERM 4602 3509576 - 3509595 + F 86 -12.2 -3.01984 | opp_overlap 3509572 3509571 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA TERM 4603 3510204 - 3510223 + G 70 -6.4 -4.15044 | gap 1, overlap 3510206 AAACGTTAATGAGCG TAGC-CGCC ATT GGCGCGCTG TTTATTGGCGCAACG TERM 4604 3511652 - 3511627 - g 71 -9 -3.43944 | opp_overlap 3511630, overlap 3511628 AGCATTAACCCATAA CCACCTGCGC GGCCTG GCGCAGATGA TTGAACTGGCACGCG zntA 3509639 - 3511840 + | zinc, cobalt and lead efflux system EFER_3443 3511877 - 3512443 + | hypothetical protein tusA 3512801 - 3512556 - | sulfurtransferase yhhQ 3513005 - 3513670 + | conserved hypothetical protein; putative inner membrane protein dcrB 3513689 - 3514300 + | periplasmic protein TERM 4605 3514318 - 3514345 + T 100 -10.6 -5.40072 | gap 1, opp_overlap 3514318 3514317, overlap 3514341 ACTACGATGATGAAG CGGTCTCCGACAG TGG TTG-CGGAGGCCG TTTTTTTAACCGCCA yhhS 3515551 - 3514304 - | putative transporter TERM 4606 3516053 - 3516037 - g 81 -7.3 -4.60041 | ATGGACTCGGAAAAA GTGGTAA CCT TCACCAC AGCGCTGATGACGGG TERM 4607 3516515 - 3516525 + G 71 -3.2 -4.86861 | GTCTGGGAATGTCGA CACT GGT GGTG TTTCTTTCTTTGTTA yhhT 3515641 - 3516690 + | conserved hypothetical protein; putative inner membrane protein TERM 4608 3516712 - 3516738 + F 100 -13.1 -3.75153 | opp_overlap 3516708 TTACAGAATTATCGA TTGCCACCGTG ATGAA TACGGTGGCAA TTTGAGTTAAGCGCG TERM 4609 3516775 - 3516761 - f 70 -3.6 -4.8543 | TAAGCGCGATAAAAA TCATTC GCC AAATGA ATTGCAATAACACAT EFER_3449 3517082 - 3517474 + | putative lipoprotein TERM 4610 3517505 - 3517487 - f 74 -10.2 -2.72461 | opp_overlap 3517484, overlap 3517486 TAATTTTTTCTAAAG TCGGGCCG TTT CGGTCCGA TAATCATTTAATTCC EFER_3450 3517535 - 3518602 + | putative methyltransferase EFER_3451 3518642 - 3519367 + | hypothetical protein EFER_3452 3519346 - 3520179 + | putative 1-acylglycerol-3-phosphate O-acyltransferase EFER_3453 3519968 - 3520417 + | putative acyl carrier protein component EFER_3454 3520429 - 3520680 + | putative acyl carrier protein 2 EFER_3455 3520685 - 3521266 + | hypothetical protein TERM 4611 3521505 - 3521489 - gf 72 -5 -4.59109 | opp_overlap 3521480 3521501, overlap 3521491 TACACGCCGGAAAAA CACCGG TGCTT CCGGGG CATAACCGCGTTATC TERM 4612 3522143 - 3522133 - gf 71 -8.2 -3.46509 | opp_overlap 3522133, overlap 3522130 3522134 CGCGAACAAGAGCAA CGCC GCT GGCG GCCCTTTCCAGGTAT EFER_3456 3521224 - 3522624 + | putative fatty acid degradation enzyme TERM 4613 3522780 - 3522792 + GF 70 -6.2 -4.21275 | CGCTTGCCCTGCTCG CGCC CGGTT GGCG TTTTCACTCAATTCA EFER_3457 3522581 - 3522964 + | putative fatty acid degradation enzyme TERM 4614 3523794 - 3523778 - g 72 -5.1 -4.56597 | opp_overlap 3523767 3523777 3523778 3523780 GTCTGCTGGGAAAAA CAGCG TTTAGCG CGCTG CTTTACCCGGTGGTG TERM 4615 3523970 - 3523952 - g 75 -6.7 -4.37886 | gap 1, overlap 3523953 CCATGCTCGACAAAA TCGCCAGC TGGC GC-GGCGA GCTACAACTCGGGCG TERM 4616 3524562 - 3524580 + G 90 -10.3 -4.43669 | GGAACATCACGCGCT CCAGTCG CCCCT CGACTGG TTTAATTTTTTCGAT EFER_3458 3522955 - 3524631 + | putative acyltransferase EFER_3459 3524635 - 3525057 + | putative thioesterase EFER_3460 3525054 - 3525659 + | putative outer membrane lipoprotein carrier protein TERM 4617 3525796 - 3525772 - gf 71 -9.9 -2.64322 | opp_overlap 3525795, overlap 3525769 ATGTTACCCAAACAG GCGATGGGCGA TAT TCCCCCAGCGC TGAATGACGGCTTTA TERM 4618 3526755 - 3526768 + GF 82 -8.1 -4.57569 | CCCCTTCCCCGGCAT TCGCC AGAT GGCGA TTTTTGCCGCCGTCG TERM 4619 3527278 - 3527260 - gf 100 -8.8 -4.65916 | CCGACGGTAACAAAA GCACTGCA AAA TGCAGGGC TGACGGCGGTGAAAC EFER_3461 3525628 - 3527946 + | putative transporter EFER_3462 3527943 - 3528527 + | putative lipoprotein TERM 4620 3528922 - 3528938 + G 70 -5.7 -4.3739 | opp_overlap 3528922, overlap 3528924 3528926 TATGCACAACAAGAA CTCGGCG ATC CGTCGCG TTTTCTCAGCCACTG EFER_3463 3528520 - 3529698 + | putative 3-oxoacyl-[acyl-carrier-protein] synthase EFER_3464 3529695 - 3530144 + | putative 3-hydroxy-fatty acyl-(acyl carrier protein) dehydratase EFER_3465 3530159 - 3530890 + | putative 3-oxoacyl-[acyl-carrier-protein] reductase TERM 4621 3530992 - 3530982 - g 72 -6.8 -4.25283 | ACTGGCGTATGAAAA TGCG GTG CGCA AAATGCCGGAGTGGC TERM 4622 3531577 - 3531539 - g 81 -9.5 -4.08945 | opp_overlap 3531539 3531542 ATGACGCGCCGAAAA CCACGCCGTCGCCGTTC GATGA AAACCGCGACGGGCTGG TGATTGGCGAAGGCG EFER_3466 3530887 - 3532116 + | putative beta-ketoacyl-ACP synthase acpT 3532118 - 3532702 + | 4'-phosphopantetheinyl transferase 2 TERM 4623 3533041 - 3533015 - g 73 -11.6 -2.59475 | overlap 3533014 3533010 CATGTACATATCAAT CACGACGATTGC CTG GAAATCGCCGTG CTGAAAGGTGACATG nikR 3532742 - 3533143 + | DNA-binding transcriptional repressor, Ni-binding TERM 4624 3533189 - 3533149 - f 72 -9.4 -3.09987 | gap 1, opp_overlap 3533150 3533154 3533156, overlap 3533140 3533152 3533154 3533156 GGAAGATTGAGTGAA TTA-GAGATCCTTTATTAA GTGA TTAATAAAGGATCTCATTA CAATTAACATGAAAG TERM 4625 3533185 - 3533152 - f 100 -17.1 -2.75891 | opp_overlap 3533150 3533154 3533156, overlap 3533149 3533140 3533154 3533156 AGATTGAGTGAATTA GAGATCCTTTATTAA GTGA TTAATAAAGGATCTC ATTACAATTAACATG TERM 4626 3533183 - 3533154 - f 100 -13.9 -2.92371 | opp_overlap 3533150 3533154 3533156, overlap 3533152 3533149 3533140 3533156 ATTGAGTGAATTAGA GATCCTTTATTAA GTGA TTAATAAAGGATC TCATTACAATTAACA TERM 4627 3533154 - 3533183 + F 95 -13.9 -2.75481 | opp_overlap 3533154 3533152 3533149 3533140 3533156, overlap 3533150 3533156 ATTGAGTGAATTAGA GATCCTTTATTAA GTGA TTAATAAAGGATC TCATTACAATTAACA TERM 4628 3533181 - 3533156 - f 79 -10.7 -3.0127 | opp_overlap 3533150 3533154 3533156, overlap 3533154 3533152 3533149 3533140 TGAGTGAATTAGAGA TCCTTTATTAA GTGA TTAATAAAGGA TCTCATTACAATTAA TERM 4629 3533156 - 3533181 + F 79 -10.7 -2.92246 | opp_overlap 3533156 3533154 3533152 3533149 3533140, overlap 3533150 3533154 TGAGTGAATTAGAGA TCCTTTATTAA GTGA TTAATAAAGGA TCTCATTACAATTAA TERM 4630 3533370 - 3533382 + G 71 -3.3 -4.74103 | overlap 3533371 AAAAATAGTCTTACA CGGCA GGC TGCCA TTTTTCGATTACAAA TERM 4631 3533822 - 3533810 - g 70 -6.3 -4.1891 | CTCTGTTAATACAAA CGAAT ATG ATTCG AAAGAGATACGAGAG EFER_3469 3533247 - 3534113 + | putative lyase containing HEAT-repeat TERM 4632 3534117 - 3534134 + F 89 -3.5 -5.60864 | overlap 3534119 TATGAATTTTAAAAC TTCATAA ATAT TTATGGA TTTTTTTCATATATC TERM 4633 3534182 - 3534162 - f 77 -10.5 -3.17325 | opp_overlap 3534176, overlap 3534160 3534158 ATCTCTTAGAACACA CCCAATAAC GCA GTCATTGGG CAATGTTCTGTGCAG EFER_3470 3534453 - 3535208 + | putative transcriptional regulator EFER_3471 3535233 - 3535706 + | putative phosphotransferase system enzyme subunit IIA EFER_3472 3535703 - 3535984 + | putative phosphotransferase system enzyme IIB TERM 4634 3536118 - 3536139 + G 72 -8.7 -3.75532 | overlap 3536117 3536114 ATATTGGGATTTGGC CCGACGGTA ATGT TGCCGTTGG TGTTATTTATTCTTG EFER_3473 3536031 - 3537419 + | putative phosphotransferase system permease component IIC EFER_3474 3537412 - 3538920 + | putative carbohydrate kinase EFER_3475 3538910 - 3539179 + | putative phosphocarrier HPr protein of a carbohydrate phosphotransferase system EFER_3476 3539210 - 3540061 + | putative aldolase TERM 4635 3540145 - 3540104 - T 70 -5.9 -4.27467 | gap 1, opp_overlap 3540104 3540103, overlap 3540092 3540090 CTACAATTCAATAAA TTGTACCGATGCGTAGACCC TAT AAGCTTACGCATCGGG-CAA CTGTATTTACGCCAT yhhJ 3541276 - 3540152 - | putative transporter subunit: membrane component of ABC superfamily rbbA 3544011 - 3541276 - | fused ribosome-associated ATPase: ATP-binding protein ; ATP-binding protein ; putative membrane protein TERM 4636 3542788 - 3542766 - G 85 -11.3 -3.65351 | gap 1, overlap 3542748 3542745 CCACCGCCAGCGAAA GCCGCT-GGC GAAT GCCGAGCGGC AATGACTCCGGCAGA TERM 4637 3543699 - 3543680 - G 71 -2.1 -5.00884 | AGGCGGGCGAAAAAA TCGACGT TTTCAT ACACCGA CAAGGTGTGGTAGAG yhiI 3545075 - 3544008 - | putative HlyD family secretion protein TERM 4638 3544079 - 3544090 + g 72 -7.2 -4.1964 | GCACCCACGCCACGC CCGG CAAA CCGG TTTTGACATATTCCA TERM 4639 3544776 - 3544788 + g 73 -9.1 -3.62354 | overlap 3544741 3544740 3544774 CTGCGCGGCGGCAAC GGCAC TTT GTGCC TCTTTGATTTGCGCG TERM 4640 3545124 - 3545144 + H 76 -11.1 -2.50816 | opp_overlap 3545122 3545121, overlap 3545123 CGCGTGTTACAACTG CCGCCGAAC GAC GTTCAGCGG ATTCATCCATCCGGG TERM 4641 3545416 - 3545431 + H 81 -4 -5.40072 | opp_overlap 3545402, overlap 3545406 GCCTTCACCTGTTAT CAGATA ATGG TGTCTG TTTTTTTACACAAAA yhiM 3545808 - 3546860 + | conserved hypothetical protein; putative inner membrane protein TERM 4642 3546907 - 3546858 - f 91 -7.4 -5.40072 | gap 2 GGTTCTGCAAAAAAA TAATATTTGCCGCCGGATTGTGCT ATTA AGC-CAACCCGGCGA-ACACATTA ACAATTACCGTCAAA TERM 4643 3547692 - 3547678 - f 76 -2.8 -5.40072 | opp_overlap 3547679, overlap 3547679 TCGTGTCTAAAAAAA TTCATC CAG GATGAT GTATGGCATCGCTCG TERM 4644 3548117 - 3548085 - g 75 -11.3 -3.10975 | ATTGATGATTTAACA CCGCTCATGGCTGGT GAA AGCAGCCATGAAGGG GGAGCAGTTTGGCCG TERM 4645 3549258 - 3549233 - g 75 -6.7 -4.38712 | CTTAGTCGCAGAAAA CGGCACCTCCG TAAG CGGTACTGCCG AACCGGGCAGTACCG TERM 4646 3549930 - 3549953 + G 71 -9.6 -3.53091 | CCGACAGCGGCACTC GCTCAGGG AAGCCACA CCCTGAGC TTTACCGCCAGCGAT TERM 4647 3552233 - 3552268 + G 77 -12.4 -2.80307 | opp_overlap 3552232 CGCCACTAATGATAC GCTGCCGCTACTGCGG GGAA CCGCCGAAGCGGGGGC TGTGGTGACGATTTA TERM 4648 3552606 - 3552578 - g 70 -10.4 -3.2375 | overlap 3552602 CACGGCAGAAGCGAA CGCCATTATCAC CATTT ATGATAACGGCG TGGAAATAGGCACCA TERM 4649 3553989 - 3553972 - g 75 -11.3 -3.08798 | opp_overlap 3553960 3553985 ATGCCGCAGGTAATA CCAGCGA TATG TCGCTGG AAACCACCATTGTGG siiEB 3547731 - 3556922 + | adhesin for cattle intestine colonization TERM 4650 3556917 - 3556907 - f 73 -5.4 -4.72029 | GTTAATTCAACAAAA TCAC ATT GTGA CCTGACAAAAACGCG TERM 4651 3556965 - 3556936 - f 78 -9.1 -3.82067 | opp_overlap 3556951, overlap 3556938 GACAAAAACGCGAAA CAGCCCCGGAGGC GATG ACCACCGGGGCAA CGGTAGTTATTTTGA TERM 4652 3556963 - 3556938 - f 100 -13.9 -3.47713 | opp_overlap 3556951, overlap 3556936 CAAAAACGCGAAACA GCCCCGGAGGC GATG ACCACCGGGGC AACGGTAGTTATTTT siiCB 3556999 - 3558402 + | outer membrane export protein TERM 4653 3560359 - 3560343 - g 70 -10.1 -3.14132 | GTCCTGCTGGATGAA CCCAGCG CCG CGCTGGA TGAGCATACCGAGCG siiBB 3558399 - 3560576 + | type I secretion membrane protein, ATP-binding protein, protein export TERM 4654 3560620 - 3560635 + G 77 -6.1 -4.58943 | CGCGAGCGCGAGTTT TCCGG GGCCAG CCGGA TTATTTTTCTCTGCA TERM 4655 3561351 - 3561331 - g 72 -6.7 -4.18668 | opp_overlap 3561333, overlap 3561335 GTAAAAAACATCAAA GTCACCACC ATT GGCGGCGTC ATTCCCCCCAACGGC siiDB 3560557 - 3561747 + | HlyD family secretion type I protein yhiN 3563063 - 3561870 - | putative oxidoreductase with FAD/NAD(P)-binding domain TERM 4656 3562527 - 3562537 + g 70 -5.4 -4.3739 | opp_overlap 3562527 TACCTTAAGACCAAA TTGC TCG GCAA TTTTATAACCCAATG pitA 3563293 - 3564792 + | phosphate transporter, low-affinity TERM 4657 3564832 - 3564811 - T 83 -11.5 -2.95116 | opp_overlap 3564811, overlap 3564808 GCAGTATTGAAATGA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATCCTTAG TERM 4658 3564811 - 3564832 + T 100 -13.7 -5.71983 | opp_overlap 3564811 3564808 GCAGTATTGAAATGA GCGGGTCAG GAAA CTGGCCCGC TTTTTTTATCCTTAG yhiO 3565179 - 3564844 - | putative universal stress (ethanol tolerance) protein B uspA 3565572 - 3566006 + | universal stress global response regulator TERM 4659 3566026 - 3566043 + F 100 -14.1 -5.67063 | TCCTGCCATTCACTA CGCCCGC ATCT GCGGGCG TTTTTTTGTCGTAAA TERM 4660 3566197 - 3566184 - f 72 -8.1 -3.84266 | opp_overlap 3566183 3566184 ACAGTCTATAGTAAA CGCGA CTTT TCGCG CGTTTTGGCTTACGC yhiP 3566250 - 3567719 + | transporter TERM 4661 3567759 - 3567736 - T 88 -9.6 -4.3739 | opp_overlap 3567735 3567736 3567738 TATTCTTGCAGAAAA CAGGGTAGCA ATAA CACTACCCTG CTTTACTTTCACACC yhiQ 3568520 - 3567768 - | putative SAM-dependent methyltransferase TERM 4662 3568379 - 3568356 - G 70 -4.6 -4.49531 | gap 1 AACAAAATCAACAAA GATGCCGCCAA GTT TTGGCT-CATC GCGCTTACGCAATTC TERM 4663 3568474 - 3568495 + g 88 -11.5 -3.794 | opp_overlap 3568476, overlap 3568476 3568493 GACGCCAGAACAGAT AAGGCGCCG TCTC CGGCGCCTG TTTCATCAATTAAAC TERM 4664 3568493 - 3568476 - G 100 -14.1 -3.72788 | opp_overlap 3568474 3568476 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA TERM 4665 3568476 - 3568493 + g 95 -14.1 -3.48105 | opp_overlap 3568476, overlap 3568474 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA prlC 3570570 - 3568528 - | oligopeptidase A TERM 4666 3568612 - 3568634 + g 74 -10.6 -3.21276 | opp_overlap 3568601, overlap 3568611 CAGATCCATCGGCTC TTCTGAACCG CCA CGGCTCAGAA TGTTGTCGAGGAACG TERM 4667 3571214 - 3571196 - g 70 -4.4 -4.56597 | GCGCGCGTGGAAAAA GCCGACGG TTT CCAGCAGC TTAAAGCCAAGCTGC TERM 4668 3571298 - 3571284 - g 75 -5.6 -4.58773 | CGTATGAAATGAAAA CCGACT ATC AGGCGG TGGTCAGCGGCATTA yhiR 3570773 - 3571615 + | putative DNA (exogenous) processing protein TERM 4669 3572407 - 3572397 - g 81 -6.8 -4.66163 | overlap 3572398 3572399 AGCGGTAGTGAAAAA TGCC GAC GGCA GCCTGACGCTGGAGC gor 3571687 - 3573039 + | glutathione oxidoreductase TERM 4670 3573074 - 3573048 - f 100 -12.4 -3.71649 | opp_overlap 3573048 GCGTTAAATGTTAAA GGGCAAAGAG TGGTGTG CTCTTTGCCC TTAGCTACGTTTCCG TERM 4671 3573048 - 3573074 + F 100 -13.8 -3.11732 | opp_overlap 3573048 GCGTTAAATGTTAAA GGGCAAAGAGTG GTG TGCTCTTTGCCC TTAGCTACGTTTCCG EFER_3494 3573198 - 3573377 + | hypothetical protein EFER_3495 3573256 - 3573423 + | hypothetical protein TERM 4672 3573535 - 3573503 - g 100 -16.6 -3.03243 | opp_overlap 3573512, overlap 3573512 ACTCAGGGCTGAAGA GTAAAAAAACCGAC GCGAA GTCGGTTTTTTTAC GTCCGGATTCGGACA TERM 4673 3573526 - 3573512 - g 100 -7.1 -5.63374 | opp_overlap 3573512, overlap 3573503 TGAAGAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACGTCCGG TERM 4674 3573512 - 3573526 + G 100 -7.1 -5.47218 | opp_overlap 3573512 3573503 TGAAGAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACGTCCGG EFER_3496 3573448 - 3573672 + | hypothetical protein TERM 4675 3573768 - 3573737 - f 73 -9.7 -3.02043 | gap 1, opp_overlap 3573745, overlap 3573745 AACTCTGGCTGAAGA GTAAAAAA-CCGAC GCAAA GTCGGTTTTTTTAC ATCCTGATTCAGACT TERM 4676 3573759 - 3573745 - f 91 -7.1 -5.27779 | opp_overlap 3573745, overlap 3573737 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACATCCTG TERM 4677 3573745 - 3573759 + F 95 -7.1 -5.48825 | opp_overlap 3573745 3573737 CTGAAGAGTAAAAAA CCGAC GCAAA GTCGG TTTTTTTACATCCTG arsR 3573918 - 3574271 + | DNA-binding transcriptional repressor TERM 4678 3574532 - 3574547 + G 90 -6.8 -5.08824 | TATCATCAGCCTGCT GCTGGA TGAG TCCGGC TTTTTTGAATGGGCG TERM 4679 3574899 - 3574913 + G 76 -4.2 -5.00884 | overlap 3574901 ATTGTTGCCACGCTG GTGATG CTG CATCTC TTTTTTCGCAAAGAT arsB 3574326 - 3575615 + | arsenite/antimonite transporter arsC 3575628 - 3576053 + | arsenate reductase TERM 4680 3576056 - 3576076 + T 76 -6.8 -4.48713 | opp_overlap 3576059, overlap 3576059 ACGCCTGAAATAACT AAAGGGGG ATATG CCCCCTTA TTTGTTCTTCGTGGC TERM 4681 3576059 - 3576073 + T 82 -8.5 -4.34486 | opp_overlap 3576059, overlap 3576056 CCTGAAATAACTAAA GGGGG ATATG CCCCC TTATTTGTTCTTCGT TERM 4682 3576073 - 3576059 - T 79 -8.5 -4.14764 | opp_overlap 3576059 3576056 CCTGAAATAACTAAA GGGGG ATATG CCCCC TTATTTGTTCTTCGT EFER_3500 3576394 - 3576074 - | hypothetical protein EFER_3501 3576490 - 3577503 + | hypothetical protein TERM 4683 3578475 - 3578457 - g 76 -12.4 -2.63073 | opp_overlap 3578456, overlap 3578456 3578454 CTGTTTGAAGAAGAT GGCGTACG CGG CGCACGCC GTTACCTGGACCATC treF 3577746 - 3579395 + | cytoplasmic trehalase TERM 4684 3579413 - 3579397 - T 70 -7.9 -3.66356 | opp_overlap 3579397 ATGGTGAACCTTAAA GCCAGGC AGT ACCCGGC TTTAAGCCCAGGATT yhjB 3580111 - 3579428 - | putative HTH-type transcriptional regulator YhjB TERM 4685 3580221 - 3580234 + H 70 -5.3 -4.56597 | ATCTGGCCTTTTAAT TAAGG AATT CCTTA TTTTTACCGAAAAAA EFER_3504 3580434 - 3580607 + | hypothetical protein yhjD 3580564 - 3581619 + | conserved hypothetical protein; putative inner membrane protein TERM 4686 3582362 - 3582351 - g 72 -7.2 -4.18018 | TCTGGCGACCGAAAA CGCG CCAC CGCG TAAGCGTGCACTGTA yhjE 3581893 - 3583215 + | putative transporter TERM 4687 3583224 - 3583250 + T 70 -9.4 -2.84619 | overlap 3583215 GTTGTAGTCGTTTTA ACTGCCGGATGT CAG ACATCCGGCAAC TATCATCACTTCTTC TERM 4688 3583330 - 3583279 - T 86 -8.9 -4.37886 | overlap 3583321 TCATCTGCGACAAAA TTGTCCGGCACTGAT-TAGCCTCCC CTTC GGAAGGTGAGATCAGTGCCAG-CAA TGCTGCCGCTGGCGT yhjG 3585316 - 3583256 - | putative outer membrane biogenesis protein TERM 4689 3583376 - 3583331 - G 74 -11.1 -3.15861 | gap 1, overlap 3583321 3583351 3583374 GATCAGTGCCAGCAA TGCTGCCGCTGGCGTAACCAGC GTT GCCAGTGCCGCC-GCAACAGCA CCACGGGCAATCAAC TERM 4690 3585093 - 3585124 + g 70 -3.6 -4.59773 | gap 1, overlap 3585101 GCGTGTATATGGGGC CACGGCACCCAGCTG CGC CAGCCGGTTTCC-TG TTTTTGCCGCTCCCA TERM 4691 3585101 - 3585117 + g 74 -7.9 -4.13748 | overlap 3585093 ATGGGGCCACGGCAC CCAGCTG CGC CAGCCGG TTTCCTGTTTTTGCC yhjH 3586150 - 3585383 - | EAL domain containing protein involved in flagellar function TERM 4692 3585460 - 3585444 - G 74 -6.5 -4.54026 | overlap 3585445 CGTGAAAGAAAATAA CCCTGTG CAG CACAGGC TGGTGAACGCTGAAC TERM 4693 3585459 - 3585445 - G 72 -10 -3.31331 | overlap 3585444 GTGAAAGAAAATAAC CCTGTG CAG CACAGG CTGGTGAACGCTGAA TERM 4694 3586289 - 3586269 - H 81 -4.1 -5.40474 | opp_overlap 3586269 3586272, overlap 3586272 ACTGGTTCAAAAAAA TAATAAAAC AGC GTTTTAATA TTGTTGACCATCCCC TERM 4695 3586286 - 3586272 - H 78 -5.8 -4.79949 | opp_overlap 3586269 3586272, overlap 3586269 GGTTCAAAAAAATAA TAAAAC AGC GTTTTA ATATTGTTGACCATC TERM 4696 3586716 - 3586736 + G 72 -8.3 -3.75535 | overlap 3586717 GAGCAATCTGCCGCC ATTTGCCAG CAA CTGGCAAAA TTTGACTATCTCTAC TERM 4697 3586717 - 3586735 + G 75 -11.8 -2.84839 | overlap 3586716 AGCAATCTGCCGCCA TTTGCCAG CAA CTGGCAAA ATTTGACTATCTCTA kdgK 3586356 - 3587285 + | ketodeoxygluconokinase TERM 4698 3587334 - 3587301 - f 77 -11.2 -2.80338 | opp_overlap 3587299, overlap 3587298 3587290 3587303 ACAACGCATCAATCA TAGCGGAGATATTA ATGGAA TAATTTCTCCGCTA AATAGTTCCGCATTA TERM 4699 3587332 - 3587303 - f 71 -9.4 -2.94466 | opp_overlap 3587299, overlap 3587301 3587298 3587290 AACGCATCAATCATA GCGGAGATATTA ATGGAA TAATTTCTCCGC TAAATAGTTCCGCAT EFER_3510 3587375 - 3588595 + | hypothetical protein TERM 4700 3590130 - 3590120 - gT 100 -4 -5.77571 | AGCAAAAAATAAAAA TATC CCT GATA AGCAACGCGCCCAGG TERM 4701 3590523 - 3590548 + GT 88 -2.5 -5.52986 | overlap 3590524 TTTCCATGGGCAGCC AGTTTTGGTCA AGAT TGTCCAGAACC TTTTTTTACTGCGCT EFER_3511 3588357 - 3590576 + | conserved hypothetical protein; TPR repeats TERM 4702 3591409 - 3591444 + T 100 -12.7 -3.78778 | opp_overlap 3591398 3591413, overlap 3591412 3591413 CTGATTAATTACCAT TAAACCCGGTAGCAT GGGAAA ATGCTACCGGGCTTG TTATTACTGTGCTGG TERM 4703 3591412 - 3591441 + T 100 -12.2 -4.0156 | opp_overlap 3591413, overlap 3591409 3591413 ATTAATTACCATTAA ACCCGGTAGCAT GGGAAA ATGCTACCGGGC TTGTTATTACTGTGC TERM 4704 3591413 - 3591440 + T 100 -15.7 -3.00213 | opp_overlap 3591413, overlap 3591412 3591409 TTAATTACCATTAAA CCCGGTAGCAT GGGAAA ATGCTACCGGG CTTGTTATTACTGTG TERM 4705 3591440 - 3591413 - T 100 -15.7 -3.82031 | opp_overlap 3591413 3591412 3591409 TTAATTACCATTAAA CCCGGTAGCAT GGGAAA ATGCTACCGGG CTTGTTATTACTGTG yhjJ 3592944 - 3591448 - | putative zinc-dependent peptidase TERM 4706 3593100 - 3593072 - R 100 -13.9 -4.52669 | opp_overlap 3593079 AAGAAGTGAAATAAA CCCGAATTCTCCC AGG AGGTGAATTCGGG CACAGGGGTCAATTA dctA 3594452 - 3593166 - | C4-dicarboxylic acid, orotate and citrate transporter TERM 4707 3594580 - 3594603 + r 82 -6.7 -4.75063 | opp_overlap 3594579 3594578, overlap 3594582 AATGTTAAAAAATTT GATCTGGCT CGCATA AGCCAGACC TTTTTAAAGTTTTGT yhjK 3596570 - 3594621 - | putative diguanylate cyclase bcsC 3600158 - 3596685 - | cellulose synthase subunit TERM 4708 3597937 - 3597953 + g 77 -8.7 -4.02132 | GTCGTGGTCACACCG GATGCGA CCA TCGCGTC TTTGTAGGTTTCCAG TERM 4709 3598829 - 3598850 + g 75 -4.4 -4.83615 | gap 1, opp_overlap 3598829, overlap 3598829 3598830 GCTGGCTGGCAGAGA G-CGAGGCG ATATA CGCTTCGGC TTTTTCTGGCGACTG TERM 4710 3599634 - 3599645 + g 70 -5.8 -4.24294 | ATTGCCCGGCGTATC CGCA TTAA TGCG TTTTAGCTGATTAAT bcsZ 3601246 - 3600140 - | endo-1,4-D-glucanase TERM 4711 3600226 - 3600207 - G 71 -3.4 -4.86293 | overlap 3600208 3600209 GAAGAAAAACGAAAA CGGTGCTG ATCC CAGCCCTG TCCGAACAGAGTCAG TERM 4712 3600305 - 3600317 + g 75 -6.9 -4.36914 | opp_overlap 3600305 TTGACGCTGAACAGA CTGCG CAT CGCGG TTTTGTAAAAAGGGC TERM 4713 3600518 - 3600508 - G 72 -8.2 -3.71873 | CTACCCACATGTAAA CGCG GAT CGCG TCGTAGCTGCTGATC TERM 4714 3601100 - 3601129 + g 70 -9.9 -3.1994 | GGAGGTGGTGATTTT GCGCGCGTCGCTG GGGT CAATGACGCGCCC TTCCTGACTGATATA bcsB 3603592 - 3601253 - | regulator of cellulose synthase, cyclic di-GMP binding TERM 4715 3602234 - 3602254 + g 84 -11.1 -3.79519 | opp_overlap 3602229 TACCGGAATACGCAG CAGCAGGCG GTT CGCCTCCTG TTTGCTGCTCAGGTT TERM 4716 3602768 - 3602758 - G 70 -4 -4.60487 | CATTAGTGGCAAAAA CAAT GGC ATTG CGATCCGGCAGTTGG bcsA 3606221 - 3603603 - | cellulose synthase, catalytic subunit TERM 4717 3604947 - 3604936 - G 72 -5.8 -4.33248 | opp_overlap 3604935 GAACCGCAGAAGAAA GTGG CATC CCAC ATATCGTTGCCATCC yhjQ 3606985 - 3606218 - | putative cell division protein (chromosome partitioning ATPase) yhjR 3607185 - 3606997 - | hypothetical protein TERM 4718 3607356 - 3607334 - H 77 -4.9 -4.98672 | GTTAAAAACAGAAAA GCAGGAA CTACAAGGC TTCCTGC CTGCCGAATTGATTC TERM 4719 3607631 - 3607617 - g 91 -11.4 -4.12532 | TTTCTCAGACAGAAA CCGCGA AAG TCGCGG CCATTAGCATGGGTA TERM 4720 3608047 - 3608036 - g 85 -7.2 -4.8622 | overlap 3608037 TGGTGTAATGAAAAA GGCG TGAG CGCC CGCCAGCAACTTACC TERM 4721 3608243 - 3608231 - g 76 -10.5 -3.33696 | GCCCTGTTTAACGAA GCGCG TAC CGCGC AGGCCGCCACAGTTG bcsE 3607472 - 3609031 + | putative protease involved in cellulose biosynthesis bcsF 3609028 - 3609219 + | hypothetical protein TERM 4722 3609359 - 3609371 + G 74 -2.6 -5.14163 | TCCGCTACTCAACCT GGTG TTTGC CGCC TTTTTGTTAATGCCT TERM 4723 3609901 - 3609917 + G 88 -12.3 -3.62572 | opp_overlap 3609886 TCCCATCAGCGCTTC CGGCTGA TGC TCAGCCG TTTGAACTGCTGGTG bcsG 3609216 - 3610895 + | putative endoglucanase involved in cellulose biosynthesis TERM 4724 3610931 - 3610906 - T 100 -16.2 -5.00339 | AGTAATAACGAAAAA GGCCGCAGAG TTTTAC CTCTGCGGCC TGGTCCGGGCGCAAA TERM 4725 3611156 - 3611197 + T 100 -13.2 -4.60797 | gap 2, overlap 3611120 3611115 TGGATGCAAGAATGG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 4726 3611360 - 3611372 + T 84 -6.3 -5.06414 | AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 4727 3611414 - 3611389 - T 100 -16.2 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCAC CTCTGCGGCC TGGTCCGGGCGCAAA EFER_3527 3611715 - 3611464 - | Small toxic polypeptide ldrD (modular protein) TERM 4728 3611679 - 3611637 - G 77 -12.1 -2.73875 | gap 1, opp_overlap 3611638, overlap 3611634 TTGGGTTCAAGATTA GCCCCCTCATATTGTCAGGT GCAT ACCTG-CAACATGCGGGGGT TTTCTCTCTCCAGCA TERM 4729 3611638 - 3611678 + g 100 -13.4 -4.60797 | gap 1, opp_overlap 3611637 3611634 TGGGTTCAAGATTAG CCCCCTCATATTGTCAGGT GCAT ACCTG-CAACATGCGGGGG TTTTCTCTCTCCAGC TERM 4730 3611841 - 3611853 + Gr 86 -6.3 -5.06414 | AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 4731 3611895 - 3611870 - gR 100 -16.2 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCAC CTCTGCGGCC TGGTCCGGGCGCAAA ldrD 3612188 - 3611946 - | toxic polypeptide, small EFER_3528 3611815 - 3612057 + | hypothetical protein TERM 4732 3612120 - 3612161 + gTF 100 -11.8 -4.60797 | gap 2 TAGGTTCAAGAATGG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAATAT-GCGGGGG TTTTCTCTCTCCAGC TERM 4733 3612324 - 3612336 + GTr 86 -6.3 -5.06414 | AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 4734 3612378 - 3612353 - gTR 100 -16.2 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCAC CTCTGCGGCC TGGTCCGGGCGCAAA ldrD 3612536 - 3612429 - | toxic polypeptide, small EFER_3530 3612298 - 3612540 + | hypothetical protein TERM 4735 3612603 - 3612644 + FH 100 -11 -4.60797 | gap 2 TAGAGTCAAGATTAG CCCCCGTGGTGTTGTCAGGT GCAT ACCTG-CAACG-TGCGGGGG TTTTCTCTCTCCAGC EFER_3533 3612957 - 3614168 + | methionine gamma-lyase EFER_3534 3614396 - 3614172 - | hypothetical protein TERM 4736 3614399 - 3614368 - G 70 -11.1 -2.7728 | opp_overlap 3614368, overlap 3614370 3614372 TTTAAATTTGAAGCA TACATGCTCTCTT GTCTCA AAAAGAGCATGTA TTTTAGACAGGGGGC TERM 4737 3614368 - 3614399 + g 77 -8.9 -4.07568 | opp_overlap 3614368 3614370 3614372 TTTAAATTTGAAGCA TACATGCTCTCTT GTCTCA AAAAGAGCATGTA TTTTAGACAGGGGGC yhjV 3614418 - 3615716 + | transporter TERM 4738 3615751 - 3615724 - T 75 -8.4 -3.84825 | gap 1, opp_overlap 3615743 TTGAGTGATATTAAA TC-GCGCCGTCAA TCA CTGGCGGCGCTGA TGCCCTGTTGGTAGC EFER_3536 3617063 - 3615732 - | putative transcriptional regulator TERM 4739 3617078 - 3617096 + r 100 -11.7 -4.14392 | opp_overlap 3617074 3617073 AACGAAAAAGTGGAA CCGGAGC ACAAG GCTCCGG TTTTGAACATTACCG dppF 3618110 - 3617106 - | dipeptide transporter ; ATP-binding component of ABC superfamily dppD 3619090 - 3618107 - | dipeptide transporter ; ATP-binding component of ABC superfamily TERM 4740 3618488 - 3618508 + g 74 -11.1 -3.1634 | CGCCATGTTCTCTTT CTGCTGCAG CTC CAGCAGCAG TTCGATGATTTGCGC TERM 4741 3618991 - 3619040 + g 70 -10.7 -2.83403 | gap 1, overlap 3618990 3619033 CAATTCCGACCACTT CGCCTTGTTTCACGCTGTAG-CTG ATA CGGTCTACGGCGCGGAACGGTGCG CTTTCGTCGCCGAAA dppC 3620003 - 3619101 - | dipeptide transporter ; membrane component of ABC superfamily dppB 3621032 - 3620013 - | dipeptide transporter; membrane component of ABC superfamily TERM 4742 3621123 - 3621092 - R 81 -9.6 -3.86897 | gap 1, opp_overlap 3621096 TGTATTGCTCACAAA TCAATTCCC-GCCCT TAT AGGACAGGGAATTAA GTATTGCTGCCGGAT TERM 4743 3621131 - 3621172 + r 81 -11.6 -2.82152 | overlap 3621129 3621129 GGAATTAAGTATTGC TGCCGGATGGTGCTGTAC GCAGAG GTACAGCGCCACCGGGTA TGGCTTTTAATTATT dppA 3622790 - 3621183 - | dipeptide transporter ; periplasmic-binding component of ABC superfamily TERM 4744 3621704 - 3621716 + g 83 -6.3 -4.88736 | overlap 3621698 GACCCGCTTCTTTCA GCAAA GCT TTTGC TTTTTCTGGATCGTA TERM 4745 3621934 - 3621950 + g 81 -9.5 -4.02424 | TTCAGCCCCGGCATT TCCATCA GGT TGATGGA TTTATCCTGCTTCAT TERM 4746 3623462 - 3623480 + r 100 -14.6 -4.82855 | opp_overlap 3623462 AACAGATGCAAAAAA GCCTGCTC ACT GAGCAGGC TTTTTGAATTTGGTC TERM 4747 3623480 - 3623462 - R 100 -14.6 -5.15381 | opp_overlap 3623462 AACAGATGCAAAAAA GCCTGCTC ACT GAGCAGGC TTTTTGAATTTGGTC TERM 4748 3623523 - 3623541 + r 77 -10.2 -3.14211 | overlap 3623540 TTACTCGCCACTTCG TGGCTCGC CCT GCGGGCCG TTGCTGGCGCAACGT TERM 4749 3623540 - 3623555 + r 73 -9 -3.55368 | overlap 3623523 GCTCGCCCTGCGGGC CGTTGC TGGC GCAACG TTCTCTCGCTTCGCT TERM 4750 3623626 - 3623653 + r 80 -11.4 -2.57244 | opp_overlap 3623632, overlap 3623632 CAGGCCGCAGAAAGC AAAAAACCAGCC CGTG GGCTGGTTTTTC TAAATTGGTCGGTGA TERM 4751 3623632 - 3623647 + r 100 -10.4 -4.92314 | opp_overlap 3623632, overlap 3623626 GCAGAAAGCAAAAAA CCAGCC CGTG GGCTGG TTTTTCTAAATTGGT TERM 4752 3623647 - 3623632 - R 100 -10.4 -5.42514 | opp_overlap 3623632 3623626 GCAGAAAGCAAAAAA CCAGCC CGTG GGCTGG TTTTTCTAAATTGGT yhjW 3625683 - 3623827 - | inner membrane protein YhjW yhjX 3627222 - 3625867 - | putative transporter TERM 4753 3627160 - 3627146 - G 75 -7.1 -4.42386 | CGCGCAGGGAGAAAA CGGCA TGAAC TGCCG TCAGGATGGAATGAA yhjY 3628039 - 3627296 - | putative lipase TERM 4754 3627677 - 3627666 - GH 70 -7.2 -3.82083 | overlap 3627660 CCATCATAATGCAAA GCCG CAAC CGGC CCGGTGGTCACCTGA tag 3628033 - 3628719 + | 3-methyl-adenine DNA glycosylase I, constitutive yiaC 3628604 - 3629149 + | putative acyltransferase with acyl-CoA N-acyltransferase domain bisC 3631397 - 3629118 - | biotin sulfoxide reductase TERM 4755 3629212 - 3629234 + g 73 -11.3 -2.67667 | opp_overlap 3629209 3629212, overlap 3629211 3629210 TTGCCTGCACAACCA TTCCCCAGC CGCGA GCTGGGGAG GTCTTTAGTCAATAC TERM 4756 3630342 - 3630326 - G 90 -11.5 -3.88498 | CCTGCATAGATGAAA GCACCGC AGC GCGGCGC GTGGGGTTACCACCA TERM 4757 3630560 - 3630577 + g 78 -8.4 -4.28656 | TAACCCCACAAATCT CTGCCG CCCATT CGGCAG TTTTCGCTATTCCGT TERM 4758 3630772 - 3630801 + g 72 -4.3 -4.61231 | gap 1, opp_overlap 3630759 3630764, overlap 3630773 AAGAAATCGACGGTT TCCGATC-GCATTG GAT CAATGCAGATCAGC TTTTTCCCGCTGTCA TERM 4759 3631578 - 3631551 - H 74 -9.2 -3.34962 | gap 1 GTTCACACGGCATAA TCTCCCGCCACGG CAA CCGTGGCAA-AGA ATAAAAAGGTTATTA yiaD 3631604 - 3632263 + | putative outer membrane lipoprotien TERM 4760 3632272 - 3632299 + F 100 -16.4 -4.06384 | GCTGTAATTCCCCAA TGTCGGATGGCG GTTT CGTCATCCGACA TTTATCATCTTGCCA EFER_3550 3632309 - 3633385 + | putative transcriptional regulator, LacI family TERM 4761 3633547 - 3633569 + GF 70 -7.7 -3.62597 | CATTCAGGCAGCAGG CGGGCAGAA AGCAC TTCTGCCGG TTATTGCAAAATCCG TERM 4762 3633903 - 3633918 + GF 71 -6.8 -4.10453 | overlap 3633904 CCCCCTGCGGACGCT TGCAGC CAAT GCTGCG TTTTAAGGGGATTTG EFER_3551 3633485 - 3634234 + | putative sugar or sugar phosphate isomerase TERM 4763 3634607 - 3634636 + GF 71 -8.5 -3.57144 | opp_overlap 3634615 CTCATTGGACGACTA TGACGAGAGCTGG TTTG CCAGTGCACGTCA TTTACACCTGAGCGG EFER_3552 3634209 - 3635177 + | 2-dehydro-3-deoxygluconokinase TERM 4764 3635861 - 3635848 - g 82 -8.1 -4.45168 | opp_overlap 3635847 CTGGTAAAAGATAAA CCTGC GCAG GCAGG CTGGCTTTCTGAATC EFER_3553 3635272 - 3636552 + | putative carboxylate-containing product, possibly ketogluconate transporter tiaE 3636574 - 3637548 + | 2-oxo-carboxylic acid reductase (glyoxalate reductase) (2-ketoaldonate reductase) TERM 4765 3637580 - 3637554 - T 100 -12.3 -5.63103 | opp_overlap 3637550 CGCGAAGTAAAAAAA TACCGGAGGGG TATAT CCACTCCGGTA TCAGATTGTTGAATA TERM 4766 3637635 - 3637607 - T 86 -11.9 -3.23546 | opp_overlap 3637606 3637605, overlap 3637611 AATAAATAGACTTAA TTAATGCCCGA AGCATTA TCGGGCATTAA AATTATTATTCAGTT yiaF 3638411 - 3637641 - | hypothetical protein TERM 4767 3638880 - 3638895 + G 72 -6.1 -4.30844 | TACTGTGCTTTGTGA CCGTC GCTATG GACGG TTTTGATACTGCAAT EFER_3556 3638759 - 3640159 + | aromatic acid, possibly hydroxybenzoate, transporter TERM 4768 3640159 - 3640199 + F 75 -10.6 -2.73635 | gap 1, overlap 3640160 AACGCAAAAAGCCTG ATTATGTCGCCTGGCGAGA GTTG TTTCGCCAGGCGAT-TAAG ATTTGCGCAAGTTTA TERM 4769 3640160 - 3640200 + F 71 -8.4 -3.56594 | gap 1, overlap 3640159 ACGCAAAAAGCCTGA TTAT-GTCGCCTGGCGAGA GTTG TTTCGCCAGGCGATTAAGA TTTGCGCAAGTTTAC yiaG 3640409 - 3640699 + | putative transcriptional regulator TERM 4770 3640727 - 3640746 + F 85 -9.3 -4.19704 | TTTTTTTAACATTCA CGGTCCT GTTCGA AGGACCG TTTTACATACAATTA TERM 4771 3640793 - 3640779 - f 82 -5.8 -4.93318 | CATAAGTTAGAAAAA TAAAAG TTG CTTTTA CATAAGTTACGTGGC cspA 3640981 - 3641193 + | major cold shock protein TERM 4772 3641241 - 3641222 - T 72 -9.2 -3.19511 | opp_overlap 3641222, overlap 3641212 3641207 3641220 GCACAGAATCTAAGA TCCCTGCC AAAT GGCGGGGA TTTTTTTATTGGAAA TERM 4773 3641222 - 3641241 + T 100 -11.4 -5.7946 | opp_overlap 3641212 3641207 3641222 3641220 GCACAGAATCTAAGA TCCCTGCC AAAT GGCGGGGA TTTTTTTATTGGAAA EFER_3559 3641618 - 3641247 - | hypothetical protein TERM 4774 3641768 - 3641749 - R 100 -13.6 -4.33248 | overlap 3641737 3641760 CAACGCCATAAGAAA GGCGGGAA TAAC TTCCCGCC GAAGACTCTTACTCT TERM 4775 3641997 - 3642026 + r 77 -6.5 -4.64844 | gap 1, opp_overlap 3641963 3641991, overlap 3641990 TGAAGCATAGAGGCA GCCTCACTTTGATT TAT AGTCAG-GTGGGGC TTTTCTCTGTCTGCC TERM 4776 3642157 - 3642137 - R 86 -2.6 -5.81032 | TAATCCTAAAAAAAA CTCATAAA ATTAA TATATGAG ACAATCTTTATTCAG TERM 4777 3642216 - 3642233 + r 100 -12.7 -4.72272 | opp_overlap 3642216 TTTAGCGATAAAAAA GCCTGCC AAAT GGCAGGC TTTTTAATAACGACG TERM 4778 3642233 - 3642216 - R 100 -12.7 -5.28176 | opp_overlap 3642216 TTTAGCGATAAAAAA GCCTGCC AAAT GGCAGGC TTTTTAATAACGACG glyS 3644321 - 3642252 - | glycine tRNA synthetase, beta subunit TERM 4779 3642947 - 3642930 - G 70 -9.9 -3.1355 | opp_overlap 3642929 3642927 CTGACCGATACCGAA GATACCC GCCA GGGTATC CATCTTGTCAGCAAT TERM 4780 3643762 - 3643752 - G 72 -8.2 -3.85698 | CGGCTCGCCCATAAA GCGG TGG CCGC GAATCACGCGATCGG glyQ 3645242 - 3644331 - | glycine tRNA synthetase, alpha subunit TERM 4781 3644537 - 3644555 + g 72 -6.7 -4.14977 | gap 1 GCAGTGGATTTTCCA GCGCCAGC AACT GCTG-CGC TTCTTTCTCGTATTG ysaB 3645640 - 3645338 - | hypothetical protein TERM 4782 3645444 - 3645462 + g 74 -3 -5.0133 | overlap 3645449 CTTCCCTGGAACTGT TCGAAGGC GGT GACGTCGA TTTTTTGCGCACCTG TERM 4783 3646311 - 3646299 - g 77 -3.4 -5.06451 | CAGTACCGCAAAAAA TCGA TGGAG TCGA ATGGCTACCAATAAA yiaH 3645809 - 3646804 + | conserved hypothetical protein; putative inner membrane protein TERM 4784 3646843 - 3646811 - T 91 -12.9 -2.79098 | opp_overlap 3646814, overlap 3646808 GTCAGTTAGCAACCA TTAGCCTGAAAAGTA GAA TACCTTTCAGGCTTA TACTCGAACCAGTGA TERM 4785 3646814 - 3646840 + T 95 -12.4 -3.40403 | opp_overlap 3646811 3646808 AGTTAGCAACCATTA GCCTGAAAAGTA GAA TACCTTTCAGGC TTATACTCGAACCAG yiaB 3647252 - 3646869 - | inner membrane protein YiaB TERM 4786 3647392 - 3647338 - R 71 -6.7 -4.17608 | gap 1, opp_overlap 3647353, overlap 3647353 TTGATTTAAAAAATA TATAGATTGGATAAATTCCCCTGCCC GGAC AGACAGGGGAATTTATT-ACCCCATA AGAGGCAGCAATTGC TERM 4787 3647353 - 3647378 + r 83 -9 -4.16016 | opp_overlap 3647338 3647353 TATAGATTGGATAAA TTCCCCTGCC CGGACA GACAGGGGAA TTTATTACCCCATAA TERM 4788 3647378 - 3647353 - R 100 -11.9 -3.91858 | opp_overlap 3647353, overlap 3647338 TATAGATTGGATAAA TTCCCCTGCCC GGAC AGACAGGGGAA TTTATTACCCCATAA xylB 3648846 - 3647383 - | xylulokinase TERM 4789 3647525 - 3647537 + g 72 -7.7 -3.86346 | GCCAGCGACTTGTCT TTGCC GAC GGCAA TTTGTGCCAACCTGG TERM 4790 3648887 - 3648859 - R 75 -5.2 -4.83615 | gap 1, overlap 3648860 CATTCCTTACAAAAA TGCCCGGT-ATCG CTAC CGCTTACCGGGCT CAGGGACTGTCTTTG TERM 4791 3648886 - 3648860 - R 73 -8.7 -3.49687 | gap 1, overlap 3648859 ATTCCTTACAAAAAT GCCCGGT-ATCG CTAC CGCTTACCGGGC TCAGGGACTGTCTTT xylA 3650232 - 3648910 - | D-xylose isomerase xylR 3650444 - 3651718 + | DNA-binding transcriptional activator, xylose-binding TERM 4792 3651763 - 3651732 - T 80 -2.9 -5.53079 | gap 1, opp_overlap 3651732 AAAAGATACAAAAAA GCCGG-AGAGCGCA TTGAG CGTGTTCTTCCGGC TTTTAGGGTTACATA TERM 4793 3651732 - 3651763 + T 71 -6.6 -4.19953 | gap 1, opp_overlap 3651732 AAAAGATACAAAAAA GCCGG-AGAGCGC ATTGAGC GTGTTCTTCCGGC TTTTAGGGTTACATA bax 3652596 - 3651772 - | hypothetical protein TERM 4794 3654813 - 3654783 - g 86 -11.1 -3.92373 | overlap 3654803 GATGTCAGCGATAAA TCCGCCGCCAGCG TCAAG CACTGGCAGCGCA TCAGCCAGTTCCGCG malS 3652839 - 3654947 + | alpha-amylase TERM 4795 3654955 - 3654985 + F 89 -11.9 -3.31263 | gap 1 AACATTAATGGTTTT GGCTTCCCGTGTGG CAAA CTGC-CGGGAAGCC TTATCAGAATCAAAT avtA 3655123 - 3656376 + | valine-pyruvate aminotransferase TERM 4796 3656411 - 3656381 - T 71 -8.3 -3.41982 | opp_overlap 3656382 3656384, overlap 3656384 AAAGTCATTAATCAA GCA-CCCCGGCACTG AAA CAG-GCCGGGGATGT TTTAAACAGGTTGTT TERM 4797 3656382 - 3656410 + T 100 -11.8 -4.10007 | opp_overlap 3656381 3656384, overlap 3656384 AAGTCATTAATCAAG CA-CCCCGGCACTG AAA CAG-GCCGGGGATG TTTTAAACAGGTTGT TERM 4798 3656384 - 3656407 + T 100 -14.6 -2.78211 | gap 1, opp_overlap 3656381 3656384, overlap 3656382 GTCATTAATCAAGCA CCCCGGCACTG AAA CAG-GCCGGGG ATGTTTTAAACAGGT TERM 4799 3656407 - 3656384 - T 100 -14.6 -2.85896 | gap 1, opp_overlap 3656384 3656382, overlap 3656381 GTCATTAATCAAGCA CCCCGGCACTG AAA CAG-GCCGGGG ATGTTTTAAACAGGT yiaI 3657006 - 3656413 - | putative hydrogenase, 4Fe-4S ferredoxin-type component yiaJ 3657875 - 3657003 - | DNA-binding transcriptional repressor yiaK 3658035 - 3659033 + | 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent TERM 4800 3659401 - 3659411 + G 80 -5.4 -4.93877 | AGAAATGATACCGGG TAGC TAC GCTA TTTTCTTTCCTCAGG yiaL 3659045 - 3659512 + | hypothetical protein yiaM 3659630 - 3660103 + | transporter yiaN 3660106 - 3661383 + | transporter TERM 4801 3661863 - 3661830 - g 95 -12.5 -4.11216 | gap 1, overlap 3661855 GGCCTACTGGGAAAA CGGCTGGCGCGATGTC ACC AAC-TCACGCCAACCG GTTAAAACGCCTGGC yiaO 3661396 - 3662382 + | transporter lyxK 3662386 - 3663882 + | L-xylulose kinase sgbH 3663879 - 3664541 + | 3-keto-L-gulonate 6-phosphate decarboxylase TERM 4802 3664742 - 3664769 + G 100 -11.3 -4.70319 | opp_overlap 3664727 CGGGCGTTGGGATCC CGTCGATGTGC CTGTCC GCACATCGTCG TTTTCCTTTTGGTAG TERM 4803 3665059 - 3665037 - g 78 -5.4 -4.82855 | overlap 3665039 CAGCAAATGGAAAAA GTGGGACGAG ATG CTCGCCTCGC CGTGGTTCACCGTCT sgbU 3664534 - 3665394 + | putative L-xylulose 5-phosphate 3-epimerase sgbE 3665388 - 3666083 + | L-ribulose-5-phosphate 4-epimerase TERM 4804 3666096 - 3666121 + T 79 -8.3 -4.13767 | gap 1, opp_overlap 3666087, overlap 3666096 TAACCATGCCTGAGT G-TGCCCGGC AATACAC GCCGGGCAGC TTTTCACATCAGAAC aldB 3667668 - 3666130 - | aldehyde dehydrogenase B TERM 4805 3666952 - 3666940 - G 71 -9.1 -3.55444 | opp_overlap 3666939 3666946 CGTTGAGCCGGTAAA CGCCA CTT TGGCG ATGCGTTTCGAGGTC TERM 4806 3667823 - 3667794 - R 100 -10.9 -4.5464 | overlap 3667806 CAGAGATAACTAAAA CTCTCTCAAAAAT CGCA AATTTTGAGAGAG TTGAAAAAATGGCTG TERM 4807 3667853 - 3667833 - R 100 -9 -5.08169 | opp_overlap 3667833 AGAGAGTTGAAAAAA TGGCTGAC AATTA GCCAGCCA TTGTGGGAATGATGA yiaY 3669020 - 3667869 - | Fe-containing alcohol dehydrogenase TERM 4808 3668600 - 3668636 + g 70 -6.6 -4.07885 | gap 1 TTTCTGATGCAGTAC CCGCAG-TGGTGTTGAT GGCG ATCATCGGCAGCTGCGG TTTTGCAGAGCGGTC TERM 4809 3669152 - 3669125 - R 100 -10 -5.68489 | opp_overlap 3669125 GAGAAGAATAAAAAA GCACATTAGATT AAAA AATCTATTGTGC TTTATTCATATCAAT TERM 4810 3669125 - 3669152 + r 93 -10 -4.29508 | opp_overlap 3669125 GAGAAGAATAAAAAA GCACATTAGATT AAAA AATCTATTGTGC TTTATTCATATCAAT selB 3671057 - 3669210 - | selenocysteinyl-tRNA-specific translation factor TERM 4811 3669902 - 3669852 - G 76 -7.6 -4.15222 | gap 2, overlap 3669838 ACCGGCCTGAATAAA GCCCGGCTGCTGAATCAGGTGACG CAATC CTTCACC--ACTCAGCTGCCGCGC CCAGGTAAAATCAGG selA 3672445 - 3671054 - | selenocysteine synthase TERM 4812 3671263 - 3671247 - G 70 -10.1 -3.14602 | opp_overlap 3671246, overlap 3671245 GGCAGGCGATCAACA GGCAGCG AAC CGCTACC AATTTGCGACTGACA yibF 3673151 - 3672543 - | putative S-transferase YibF yibH 3674356 - 3673220 - | hypothetical protein yibI 3674721 - 3674359 - | conserved hypothetical protein; putative inner membrane protein TERM 4813 3674996 - 3674981 - g 85 -3.3 -5.45802 | opp_overlap 3674981, overlap 3674975 CCTTCAAAATAAAAA TGTGA GTAACT TCACA TTTATATGCCATTTT EFER_3589 3674919 - 3675200 + | hypothetical protein TERM 4814 3676793 - 3676756 - g 80 -11.4 -3.28712 | overlap 3676758 GCTCGGCGCGGAGAA CATCTTCCTTGGTCGC AAAGCG GCAACCAAAGAAGAAG CGATTCGTTTTGCTG TERM 4815 3676791 - 3676758 - g 81 -12.6 -3.21276 | overlap 3676756 TCGGCGCGGAGAACA TCTTCCTTGGTCGC AAAGCG GCAACCAAAGAAGA AGCGATTCGTTTTGC TERM 4816 3676900 - 3676877 - g 75 -5.2 -4.59773 | CTGGATCGTGAAAAA CTGACCCCGA CTTA TCTGGGTGAG TCCATCGCAGTACCG mtlA 3675257 - 3677173 + | fused mannitol-specific PTS enzymes: IIA components ; IIB components ; IIC components TERM 4817 3677208 - 3677179 - f 89 -12.1 -3.23899 | opp_overlap 3677184, overlap 3677174 TCGTAAGTAATCCAA CCCTACCCTCTCC TCAC GGAGAGGGTTTGG GTGAGGGAAAAGCCT TERM 4818 3677184 - 3677203 + F 100 -13.6 -3.64703 | opp_overlap 3677179 3677174 AGTAATCCAACCCTA CCCTCTCC TCAC GGAGAGGG TTTGGGTGAGGGAAA TERM 4819 3677651 - 3677633 - g 74 -7.4 -4.07885 | TATCGCCTGTGAAAA CATGGTAC GCG GCACCACG CAGCTGAAAGGCCAT mtlD 3677268 - 3678416 + | mannitol-1-phosphate dehydrogenase, NAD(P)-binding TERM 4820 3678450 - 3678424 - f 79 -10.9 -3.12862 | gap 1, overlap 3678422 AGCAATGATGTAAGA CCAGGCCGCAGG GTAA CCTGCG-CCTGA AACATAGATTGTCAG TERM 4821 3678556 - 3678588 + G 76 -12.8 -2.57243 | gap 1, overlap 3678555 3678553 TACGGAGCTTTTTGA TCACCGCTGTCGATC TCCT GACCGAC-GCGGTGA ATATTCTGGTGCTCC TERM 4822 3678836 - 3678879 + G 78 -9 -3.96148 | gap 2, overlap 3678842 GGGGCCATTTGGCGA GCT-ACACTGT-GTGGCGGC ACTGCC GCCGCCACCGCAGTTTGAGC TTTCTGATCCCAGCC TERM 4823 3678842 - 3678872 + G 84 -11.2 -3.74749 | gap 1, overlap 3678836 ATTTGGCGAGCTACA CTGT-GTGGCGGC ACTGCC GCCGCCACCGCAG TTTGAGCTTTCTGAT mtlR 3678459 - 3679004 + | DNA-binding repressor EFER_3593 3679301 - 3679017 - | hypothetical protein yibL 3679512 - 3679874 + | hypothetical protein EFER_3595 3680406 - 3681080 + | putative lipoprotein TERM 4824 3681098 - 3681078 - f 100 -4.7 -6.04324 | opp_overlap 3681082, overlap 3681083 CGAAAAAACAAAAAA TAAATGCAG CTT CTGCGCTTA CTATCAAGGAATTGA EFER_3596 3681110 - 3686497 + | putative exported protein; putative outer membrane protein TERM 4825 3686668 - 3686637 - f 75 -10.2 -2.77013 | opp_overlap 3686640, overlap 3686636 3686640 CACGTCGCCAACAAT CCAGGGCAATTCTC TGAT GAGAATTGCCCTTT TCTTTGCCAATCTTT TERM 4826 3686665 - 3686640 - f 100 -16.3 -2.6563 | opp_overlap 3686640, overlap 3686637 3686636 GTCGCCAACAATCCA GGGCAATTCTC TGAT GAGAATTGCCC TTTTCTTTGCCAATC TERM 4827 3686640 - 3686665 + F 100 -16.3 -4.87803 | opp_overlap 3686640 3686637 3686636 GTCGCCAACAATCCA GGGCAATTCTC TGAT GAGAATTGCCC TTTTCTTTGCCAATC lldP 3686925 - 3688580 + | L-lactate permease lldR 3688580 - 3689356 + | DNA-binding transcriptional repressor TERM 4828 3689569 - 3689557 - g 71 -3.3 -4.8622 | CTGTTTAATGAAAAA CTGTC GAT GCCAG TTGCACTTGCACCTG TERM 4829 3689742 - 3689757 + G 74 -8.2 -3.91897 | GTTCCAGTTGTATGT GCTGCG CGAT CGCGGC TTTATGCGTAACGCG TERM 4830 3689799 - 3689788 - g 70 -5.8 -4.2828 | CTGGAGCGAGCAAAA GCAG CAGG CTGC TCGACGCTGGTTTTC lldD 3689353 - 3690543 + | L-lactate dehydrogenase, FMN-linked TERM 4831 3690567 - 3690589 + F 83 -12 -2.79302 | opp_overlap 3690558 3690556 TGAATATCTGCTATC CTGCCCCC GCACTAA GGGGGCAG TATGCTAAACATCGT yibK 3690591 - 3691064 + | putative rRNA methylase cysE 3691938 - 3691117 - | serine acetyltransferase TERM 4832 3691992 - 3691963 - R 95 -11.5 -3.78879 | gap 1, overlap 3691966 CACACGATAAGATAA TGA-CCGGCCCG TTCTGCG CGGGCCGGGTCA TAGCGGTAACAAAGG TERM 4833 3691988 - 3691966 - R 100 -13.4 -2.97393 | overlap 3691963 ACGATAAGATAATGA CCGGCCCG TTCTGCG CGGGCCGG GTCATAGCGGTAACA gpsA 3693037 - 3692018 - | glycerol-3-phosphate dehydrogenase (NAD+) TERM 4834 3692931 - 3692957 + g 78 -8.7 -4.1552 | gap 1 ATATGTTCAGGGTCA TGGCCCCAGAGG ACAA CCTC-GTGGCCA TTTCTTGCCAGGGTA TERM 4835 3693035 - 3693051 + g 81 -10.9 -3.69283 | overlap 3693046 AGCATTACGTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3693504 - 3693037 - | protein export chaperone grxC 3693817 - 3693566 - | glutaredoxin 3 yibN 3694277 - 3693846 - | putative rhodanese-related sulfurtransferase gpmI 3694523 - 3696067 + | phosphoglycero mutase III, cofactor-independent TERM 4836 3696138 - 3696187 + G 81 -9.3 -4.07568 | gap 1, opp_overlap 3696138, overlap 3696149 GCAGGTTTGCAATCA GGCCCATCAT-CTACGCCAGCGTT CTT AGCGCTGGCGTATTGTTGTGCGCC TTTTCCGCCCACGCG TERM 4837 3696149 - 3696175 + G 100 -17.4 -3.81022 | opp_overlap 3696138, overlap 3696138 ATCAGGCCCATCATC TACGCCAGCGTT CTT AGCGCTGGCGTA TTGTTGTGCGCCTTT TERM 4838 3696457 - 3696443 - g 73 -9.2 -3.6279 | opp_overlap 3696454, overlap 3696433 AAAGCCGCTCAAGAA CGCAGC CTC GCCGCG CAACTGGATGCCGCG envC 3696101 - 3697360 + | protease with a role in cell division TERM 4839 3697496 - 3697486 - g 77 -6.8 -4.48987 | CCCGCACAACGAAAA CCAG GTG CTGG CGATGCCCTCCGCTA TERM 4840 3698136 - 3698116 - g 72 -4.6 -4.59109 | TACACCGCCGAAAAA CACTGTGC CCGAC GCACCGCG TAATCCGTTCCGTGG yibQ 3697364 - 3698320 + | putative polysaccharide deacetylase yibD 3699341 - 3698307 - | putative glycosyl transferase TERM 4841 3699568 - 3699551 - R 70 -5.5 -4.53303 | overlap 3699553 TATCCTCAGAGAAAA GAGCTGG GATT CCAGCTA TGCAAGCCTGATACG TERM 4842 3699566 - 3699553 - R 72 -8.1 -3.87627 | overlap 3699551 TCCTCAGAGAAAAGA GCTGG GATT CCAGC TATGCAAGCCTGATA TERM 4843 3699598 - 3699574 - R 86 -12.1 -3.07935 | opp_overlap 3699572 ATTCCAGCTATGCAA GCCTGATACGC GTA GCGTACCTGGC AACTTTGTTCCCAGC TERM 4844 3699621 - 3699657 + r 78 -10.3 -3.24735 | gap 1, opp_overlap 3699617, overlap 3699617 3699615 TTCCCAGCACATTGA TGGCGCTTTCGTTTTC TACCTT GTAAACGAA-GCGCCA TTCACTCTTTAAATC hemN 3701039 - 3699666 - | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent TERM 4845 3701066 - 3701123 + r 82 -8.4 -4.36914 | gap 3, overlap 3701068 3701102 3701105 3701108 CCGATGGCGTCTCTG GCGGCTACGGCGTACCGGCGGATG-CCCG TTT CGAGTCATCAGCCGGT-TGC-GCAGCCAC TTTTGTCGCCGCGAC TERM 4846 3701105 - 3701146 + r 76 -10.2 -2.91144 | overlap 3701068 3701066 3701102 3701108 CCCGTTTCGAGTCAT CAGCCGGTTG-CGCAGCCAC TTTT GTCGCCGCGACAACCG-CTG TAGTTTAACGAATAA yihI 3701797 - 3701228 - | hypothetical protein TERM 4847 3701675 - 3701692 + g 82 -9.1 -4.20106 | overlap 3701668 CTGATTCAGCTCTTC GCGCGTT TTGC GACGCGC TTTTGCATGACCTTT TERM 4848 3701847 - 3701794 - G 100 -16.3 -4.23794 | opp_overlap 3701810, overlap 3701798 3701810 GGAATCTAACAGAAA GCAAGCAAAGAAAAAAGGCGACAGA TTGC TCTGTCGCCTTTTTTCTTGACTCAA AACCCTCAGCGGGCC TERM 4849 3701843 - 3701798 - H 100 -21.5 -3.69341 | opp_overlap 3701810, overlap 3701794 3701810 TCTAACAGAAAGCAA GCAAAGAAAAAAGGCGACAGA TTGC TCTGTCGCCTTTTTTCTTGAC TCAAAACCCTCAGCG TERM 4850 3701831 - 3701810 - H 100 -14.5 -5.72053 | opp_overlap 3701810, overlap 3701798 3701794 CAAGCAAAGAAAAAA GGCGACAGA TTGC TCTGTCGCC TTTTTTCTTGACTCA TERM 4851 3701810 - 3701831 + H 100 -14.5 -5.4833 | opp_overlap 3701810 3701798 3701794 CAAGCAAAGAAAAAA GGCGACAGA TTGC TCTGTCGCC TTTTTTCTTGACTCA yihA 3702355 - 3702951 + | GTP-binding protein TERM 4852 3703078 - 3703053 - T 100 -19.1 -5.4505 | opp_overlap 3703046 TCGCCCAATAAAAAA CGCCCCAGTCA TTAC TGACTGGGGCG GCTAAAATATTCAGC polA 3706088 - 3703302 - | fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ; 3'->5' exonuclease TERM 4853 3705161 - 3705179 + g 77 -10.2 -3.5936 | opp_overlap 3705154, overlap 3705170 CTGCAACACTGGTTT CCTGCGGC CTG GCTGCGGG TTTCGCCCCTTTAGC TERM 4854 3705471 - 3705490 + g 83 -6.4 -5.00616 | gap 1 CAGCCCGCCAAGCCC CTGCAGCAG TGC CTGC-GCGG TTTTTTCACCAACGC TERM 4855 3706876 - 3706890 + G 70 -5.7 -4.386 | CGGTCTCGCATGCTG GGCAT TAGAT ATGCC TTTTATGAAACGTTA yihG 3706427 - 3707380 + | putative endonuclease EFER_3615 3708843 - 3707425 - | conserved hypothetical protein; putative exported protein YihF TERM 4856 3708417 - 3708449 + g 73 -11.3 -2.81471 | opp_overlap 3708416 3708419 3708423, overlap 3708428 ATGCAACCACGATAT CAGCAACGAATGGTG ACT TACCTTTCGTTGCAG TGTAGTAGGATTGTG TERM 4857 3708447 - 3708419 - G 73 -11.8 -2.68487 | opp_overlap 3708417 3708428, overlap 3708416 3708423 GCAACCACGATATCA GCAACGAATGGT GACTT ACCTTTCGTTGC AGTGTAGTAGGATTG TERM 4858 3708500 - 3708511 + g 70 -5.8 -4.22041 | GATACCTTTGCCGTT GCCA TAGT TGGC TTTATATTACCCTTT TERM 4859 3708967 - 3708988 + r 80 -10.1 -3.59946 | opp_overlap 3708968, overlap 3708968 ATTAAATAATAAAAA AGCCCGTGA ATAT TCACGGGCC TTATGTAATTCACAA TERM 4860 3708968 - 3708987 + r 93 -13.6 -2.75647 | opp_overlap 3708968, overlap 3708967 TTAAATAATAAAAAA GCCCGTGA ATAT TCACGGGC CTTATGTAATTCACA TERM 4861 3708987 - 3708968 - R 100 -13.6 -5.72254 | opp_overlap 3708968 3708967 TTAAATAATAAAAAA GCCCGTGA ATAT TCACGGGC CTTATGTAATTCACA TERM 4862 3708994 - 3709010 + r 88 -6.7 -5.24129 | opp_overlap 3708997 TTCACGGGCCTTATG TAATTCA CAA TGAATTA TTTTTTCTCGGACAG dsbA 3709634 - 3709008 - | periplasmic protein disulfide isomerase I TERM 4863 3709146 - 3709157 + g 73 -3.6 -4.77036 | GCCACGCAATTGCAC GTCG GCTG CGGC TTTTTCCTGCTGAGC yihE 3710637 - 3709651 - | putative kinase TERM 4864 3709680 - 3709692 + g 72 -6.3 -4.31043 | TTAATTGCAAAGGGG GTTCT TGT AGAAC TTTTGCCTGTTCTAT TERM 4865 3710389 - 3710371 - G 72 -8.8 -3.78953 | AGTCTGACCATTAAA GGCCACAG GTG CTGCGACC GGAACTTCATCGTTA yihD 3710983 - 3710714 - | hypothetical protein mobA 3711062 - 3711637 + | molybdopterin-guanine dinucleotide synthase TERM 4866 3711846 - 3711821 - g 79 -9.7 -3.85698 | overlap 3711775 3711776 CTGGCGCGGCACAAA CCATCGTTGCC AGCC AGCAGCGATGG GCCTTGATGACGGAA mobB 3711634 - 3712146 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 4867 3712215 - 3712234 + T 100 -13.6 -3.58914 | opp_overlap 3712215, overlap 3712203 GCACCAATGCAAAAA GGCCATCC GTCA GGATGGCC TTCTGCTTGATTTGA TERM 4868 3712234 - 3712215 - T 100 -13.6 -4.7629 | opp_overlap 3712215 3712203 GCACCAATGCAAAAA GGCCATCC GTCA GGATGGCC TTCTGCTTGATTTGA TERM 4869 3715492 - 3715529 + T 100 -6.3 -5.68438 | opp_overlap 3715488 3715494, overlap 3715494 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4870 3715494 - 3715527 + T 93 -8.9 -4.47052 | opp_overlap 3715488 3715494, overlap 3715492 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4871 3715527 - 3715494 - T 76 -6.7 -4.49756 | opp_overlap 3715494 3715492, overlap 3715488 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT hemG 3718280 - 3717735 - | protoporphyrin oxidase, flavoprotein trkH 3719743 - 3718292 - | potassium transporter TERM 4872 3718566 - 3718547 - G 75 -5 -4.84761 | ATAGGCGGAGAAAAA TCCCCAAA CGGC TTCGAGGA TACGTTCCGGCAGTG TERM 4873 3719503 - 3719484 - G 80 -5.6 -4.89567 | TCCGAAAAGATAAAA GGGAGCGC ACCG ACGCTACC CAACACGGTCCAGAA TERM 4874 3719643 - 3719631 - G 70 -6.9 -4.08064 | AAGGTCTGGGTAAAA GCGCG GCC CGCAC CATCCCGGTAGATGA yigZ 3720396 - 3719782 - | putative elongation factor TERM 4875 3720112 - 3720081 - G 85 -13 -3.13403 | opp_overlap 3720080 3720083, overlap 3720079 CGGTGCCCAGCAATA TGCCGCCGTAGTAG CGCA CCACCACGGCGGTA ATTTCCCCGACGCCG TERM 4876 3720083 - 3720110 + g 71 -11.2 -2.90496 | opp_overlap 3720081 3720079, overlap 3720080 GTGCCCAGCAATATG CCGCCGTAGTAG CGCA CCACCACGGCGG TAATTTCCCCGACGC pepQ 3721727 - 3720396 - | proline dipeptidase TERM 4877 3721799 - 3721821 + H 71 -4.8 -4.60648 | CCAGAGCGTGATTTC TGCCGAGC GTGATCA GATCGGCA TTTCTTTAATCTTTT TERM 4878 3722112 - 3722132 + G 76 -3.9 -4.91459 | overlap 3722113 AAAGCAGCCTTTATC GTCGGTGCT GAT ATCACCGAA TTTTTGTCCCTGTTC fadB 3721917 - 3724106 + | fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase fadA 3724116 - 3725279 + | 3-ketoacyl-CoA thiolase (thiolase I) TERM 4879 3725352 - 3725299 - T 100 -28.3 -3.57387 | overlap 3725300 AACAGACTCCTGAAA CGGCGCTTCGCTTGCCCGACCTG GCTACATG CAGGACGGGCAAGCGAAGCGCCC CTGGCTAAGAAGTTC TERM 4880 3725351 - 3725300 - T 100 -31.8 -2.7395 | overlap 3725299 ACAGACTCCTGAAAC GGCGCTTCGCTTGCCCGACCTG GCTACATG CAGGACGGGCAAGCGAAGCGCC CCTGGCTAAGAAGTT TERM 4881 3725431 - 3725449 + T 100 -9.5 -5.57729 | TTAGTTGCCGTTCTT CCCGCCT GTCAG GGGCGGG TTTTTTATCTTCTTT EFER_3637 3727298 - 3725463 - | putative arylsulfatase; possibly exported TERM 4882 3726265 - 3726277 + g 82 -9.1 -4.25283 | opp_overlap 3726263 TTCAGGCAAACAGCT CCCTG ATC CAGGG TTTTCATAACCACAT TERM 4883 3727532 - 3727566 + r 100 -13 -3.64703 | opp_overlap 3727535 3727537 3727539, overlap 3727535 3727537 3727539 GATTGCAGACACAGG ACATATATCAGGGGCA ATA TGCCCCTGATATATCA TTTAAATAAACGCAA TERM 4884 3727563 - 3727535 - R 100 -19.1 -2.90797 | opp_overlap 3727532 3727535 3727537 3727539, overlap 3727537 3727539 TGCAGACACAGGACA TATATCAGGGGCA ATA TGCCCCTGATATA TCATTTAAATAAACG TERM 4885 3727535 - 3727563 + r 100 -19.1 -2.94144 | opp_overlap 3727535 3727537 3727539, overlap 3727532 3727537 3727539 TGCAGACACAGGACA TATATCAGGGGCA ATA TGCCCCTGATATA TCATTTAAATAAACG TERM 4886 3727561 - 3727537 - R 100 -17.3 -3.00259 | opp_overlap 3727535 3727532 3727537 3727539, overlap 3727535 3727539 CAGACACAGGACATA TATCAGGGGCA ATA TGCCCCTGATA TATCATTTAAATAAA TERM 4887 3727537 - 3727561 + r 100 -17.3 -3.02324 | opp_overlap 3727537 3727535 3727539, overlap 3727535 3727532 3727539 CAGACACAGGACATA TATCAGGGGCA ATA TGCCCCTGATA TATCATTTAAATAAA TERM 4888 3727539 - 3727559 + r 100 -15.5 -3.06483 | opp_overlap 3727537 3727535 3727539, overlap 3727537 3727535 3727532 GACACAGGACATATA TCAGGGGCA ATA TGCCCCTGA TATATCATTTAAATA TERM 4889 3727559 - 3727539 - R 100 -15.5 -3.04983 | opp_overlap 3727539 3727537 3727535 3727532, overlap 3727537 3727535 GACACAGGACATATA TCAGGGGCA ATA TGCCCCTGA TATATCATTTAAATA fre 3728269 - 3727568 - | flavin reductase ubiD 3729808 - 3728315 - | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 4890 3729178 - 3729160 - G 70 -6.6 -4.04206 | CCAGCGCCACAGAAA CCGGGAAA CGT TCGCCCGG ATGCGCCGCACACCA TERM 4891 3729396 - 3729408 + g 85 -3.3 -5.4505 | overlap 3729391 TTGAGATCGACGTCA TCGCC AGA GACGA TTTTTTGTTGGCAGG TERM 4892 3730192 - 3730205 + G 72 -8.1 -3.95621 | overlap 3730201 CTATCAGTGCTACAC GTGGC GTCA GCCAC TTTGTGCGCTTTGGT rfaH 3729975 - 3730463 + | DNA-binding transcriptional antiterminator tatD 3731242 - 3730460 - | DNase, magnesium-dependent TERM 4893 3730797 - 3730785 - G 74 -7.7 -4.07568 | overlap 3730787 CGCGTTCCGGTAAAA CAGTG CAA CACTG CACCAGGTAGTTTCT TERM 4894 3731257 - 3731282 + r 86 -8.9 -4.36372 | opp_overlap 3731259 3731262, overlap 3731258 3731259 3731262 3731279 TCCTGCTCTCCATAT GACAACCGCCC TGAC GGGCGGTTGAA TTTATTCAGTTTTTT TERM 4895 3731258 - 3731281 + r 93 -12.4 -3.19383 | opp_overlap 3731259 3731262, overlap 3731257 3731259 3731262 3731279 CCTGCTCTCCATATG ACAACCGCCC TGAC GGGCGGTTGA ATTTATTCAGTTTTT TERM 4896 3731259 - 3731280 + r 100 -15.9 -2.50003 | opp_overlap 3731259 3731262, overlap 3731258 3731257 3731262 3731279 CTGCTCTCCATATGA CAACCGCCC TGAC GGGCGGTTG AATTTATTCAGTTTT TERM 4897 3731280 - 3731259 - R 100 -15.9 -2.62184 | opp_overlap 3731259 3731258 3731257 3731262 3731279, overlap 3731262 CTGCTCTCCATATGA CAACCGCCC TGAC GGGCGGTTG AATTTATTCAGTTTT TERM 4898 3731262 - 3731277 + r 89 -11.8 -3.38162 | opp_overlap 3731259 3731262, overlap 3731259 3731258 3731257 CTCTCCATATGACAA CCGCCC TGAC GGGCGG TTGAATTTATTCAGT TERM 4899 3731277 - 3731262 - R 91 -11.8 -3.46602 | opp_overlap 3731262 3731259 3731258 3731257, overlap 3731259 CTCTCCATATGACAA CCGCCC TGAC GGGCGG TTGAATTTATTCAGT tatC 3732057 - 3731284 - | TatABCE protein translocation system subunit tatB 3732584 - 3732060 - | TatABCE protein translocation system subunit tatA 3732857 - 3732588 - | TatABCE protein translocation system subunit ubiB 3734576 - 3732936 - | 2-octaprenylphenol hydroxylase TERM 4900 3734457 - 3734494 + g 83 -9.9 -4.1196 | gap 1, opp_overlap 3734457 3734460 CGGCATCCAGAATAA TGAGTATCGCCATAGCCG TAA CGGC-AGGGTGATACGCA TTTTAGGGATCAGTT yigP 3735178 - 3734573 - | hypothetical protein ubiE 3735947 - 3735192 - | bifunctional 2-octaprenyl-6-methoxy-1, 4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase rmuC 3737469 - 3736042 - | recombination limiting protein TERM 4901 3736854 - 3736868 + g 85 -7.1 -4.78839 | TTAGCACCACTTCGC CCCAG TTGCC CTGGG TTTTATTGTCGCCTT TERM 4902 3737589 - 3737622 + H 73 -9.8 -2.94938 | ATTTTCATTATTTTA TCCCACAATATGAG ATGAAG TTTATATTGTGGGA TATATCACCTTTTCC EFER_3649 3737685 - 3738452 + | putative transcriptional regulator EFER_3650 3738476 - 3739480 + | acidic carbohydrate kinase EFER_3651 3739395 - 3740099 + | phospho acidic carbohydrate aldolase EFER_3652 3740124 - 3741098 + | putative periplasmic binding protein TERM 4903 3741414 - 3741426 + G 77 -6.9 -4.57353 | opp_overlap 3741414, overlap 3741415 AACGGCAACAGGAAT TGCGG CAA CCGCG TTTTATATCGTGGCA EFER_3653 3741115 - 3741621 + | putative permease subunit EFER_3654 3741634 - 3743124 + | hypothetical protein TERM 4904 3743132 - 3743153 + T 100 -13.7 -5.95539 | opp_overlap 3743129 GTCAGTAACTGATAT CGCTCCCCG ACGT TGGGGAGCG TTTTTTTATTTCAGC udp 3743929 - 3743159 - | uridine phosphorylase TERM 4905 3743790 - 3743804 + g 72 -7.1 -4.18762 | AATTCGCGGTGAGAT GCCAG CTTAA CTGGC TTTTCCATCAGCGTT ysgA 3744119 - 3744997 + | putative hydrolase TERM 4906 3745063 - 3745083 + T 100 -12.6 -3.77722 | AGTTTTGCACGCCTG CCTGCCGT TAATT ACGGCAGG TTATTCCTGCTTACG EFER_3657 3745848 - 3745084 - | putative GntR-family transcriptional regulator TERM 4907 3745836 - 3745873 + g 93 -14.5 -3.08344 | opp_overlap 3745836 3745860, overlap 3745829 TTCTCTTTTCGATAA GTTGTATAGTCAACT ACAGTTAA AGTTGACTATACAAC TATGTATGATTTGAA TERM 4908 3745873 - 3745836 - G 100 -14.5 -3.28712 | opp_overlap 3745836 3745829, overlap 3745860 TTCTCTTTTCGATAA GTTGTATAGTCAACT ACAGTTAA AGTTGACTATACAAC TATGTATGATTTGAA EFER_3658 3745939 - 3746757 + | putative hydrolase EFER_3659 3746930 - 3747805 + | hypothetical protein EFER_3660 3747778 - 3748230 + | conserved hypothetical protein; putative permease TERM 4909 3748253 - 3748238 - T 77 -10.4 -3.18264 | TGTTTTAGGGACTAA GGCCCA TGGA TGGGCC GAATAATCCGCAAAC EFER_3661 3748967 - 3748290 - | Putative extracellular solute-binding protein EFER_3662 3749938 - 3748970 - | Putative HTH-type transcriptional regulator (ybhD) TERM 4910 3751071 - 3751057 - g 71 -2.8 -4.8622 | overlap 3751036 CTGGTTAATGAAAAA GATAAC ACC GTCACC TGGTTTTTCTTCGAT EFER_3663 3750409 - 3751467 + | putative lactonase EFER_3664 3751479 - 3752744 + | hypothetical protein; putative membrane protein TERM 4911 3753538 - 3753494 - g 74 -2.7 -4.93877 | CTTTATTAAAGAAAA TCGCGAACATGAGTGGATTGC TCT GCAACCCGATGATGGCTGCGA ATATGACGGTTATAT EFER_3665 3752769 - 3754715 + | Putative aconitate hydratase TERM 4912 3754749 - 3754731 - f 82 -10.3 -3.65827 | opp_overlap 3754735 3754746, overlap 3754735 TAACGGTTAGCGAAA TGCAGGC GCTAT GCCTGCA TTAACGCCAGTTGAG EFER_3666 3754760 - 3755929 + | hypothetical protein TERM 4913 3758037 - 3758047 + G 77 -6.8 -4.4959 | ACCGACCTTTGAACC TGGC GAT GCCA TTTTCGTTCCTTACG EFER_3667 3755968 - 3758232 + | hypothetical protein TERM 4914 3758871 - 3758861 - g 82 -3.2 -5.24129 | overlap 3758870 GTTTGCGAGAAAAAA TGGC AAA ACCA ACGTCACGGTGATCA TERM 4915 3759025 - 3759042 + G 86 -6.3 -5.0916 | opp_overlap 3759022, overlap 3759026 TGGCGGACGAAACCT TCTGCAA AGGA TTGCAGG TTTTTGTATTACCAA EFER_3668 3758247 - 3759410 + | Putative Isocitrate dehydrogenase TERM 4916 3760283 - 3760271 - g 91 -10.5 -4.16842 | TGGATCCCGAACAAA CGCCG GGG CGGCG TGGTGCTGGCAGGGA TERM 4917 3760950 - 3760971 + G 88 -12.3 -3.7108 | gap 1 CTGATACCGTCGGAA CGGGTG-GCG ATT CGCACACCCG TTTCCCTGTCGGACT EFER_3669 3759467 - 3761989 + | Putative Aconitate hydratase 2 (Citrate hydro-lyase 2) (Aconitase 2) EFER_3670 3762227 - 3763081 + | Putative fumarylacetoacetate (FAA) hydrolase TERM 4918 3763106 - 3763089 - T 89 -12.7 -2.78547 | opp_overlap 3763089, overlap 3763086 CCATTTGATCAATCA CGGAGGC TTTC GCCTCCG TTCTTATTATCATCC TERM 4919 3763089 - 3763106 + T 100 -12.7 -4.05004 | opp_overlap 3763086 3763089 CCATTTGATCAATCA CGGAGGC TTTC GCCTCCG TTCTTATTATCATCC metE 3765377 - 3763116 - | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase TERM 4920 3763164 - 3763189 + g 74 -7.5 -4.07687 | overlap 3763157 CATGTTCGCCAGTGC CGCGCGGGT TTCTGGCC AGCCGCGCG TTTTCAGGCCACAGT TERM 4921 3764307 - 3764321 + g 72 -5.7 -4.56597 | opp_overlap 3764307 CGCATCGCGCAGCAA TGCCA GTTCA TGGCA TTTTTGCAGAGCGAA TERM 4922 3765200 - 3765222 + g 88 -8.5 -4.71426 | gap 1, overlap 3765203 CAAAATCACCCACCG GCA-GCAGGT CGAT ACCTGCTTGC TTTTGTTGATCCCAG TERM 4923 3765203 - 3765218 + g 76 -9 -3.83868 | overlap 3765200 AATCACCCACCGGCA GCAGGT CGAT ACCTGC TTGCTTTTGTTGATC TERM 4924 3765530 - 3765520 - gR 72 -6.8 -4.23434 | overlap 3765521 TAAAACACCTGAAAA CGCT ACA AGCG TTGCGGAACTGCGGC TERM 4925 3766045 - 3766065 + Gr 72 -7.5 -3.89346 | opp_overlap 3766033, overlap 3766049 TCACGCCGGAAGACC TCGCCAGCG AAA CGCTGTTGA TTTATCCGGTGCAGC TERM 4926 3766049 - 3766061 + Gr 75 -9.1 -3.61244 | opp_overlap 3766033, overlap 3766045 GCCGGAAGACCTCGC CAGCG AAA CGCTG TTGATTTATCCGGTG yigM 3767235 - 3766336 - | conserved hypothetical protein; putative inner membrane protein metR 3765495 - 3766448 + | DNA-binding transcriptional activator, homocysteine-binding yigL 3768111 - 3767311 - | putative hydrolase pldB 3769141 - 3768119 - | lysophospholipase L(2) rhtB 3769252 - 3769872 + | neutral amino-acid efflux system EFER_3677 3770031 - 3770891 + | conserved hypothetical protein, putative transposase, YhgA-like TERM 4927 3770896 - 3770924 + T 100 -14.7 -2.71011 | TGCAATCCTGATGTT ATTCCCCCTGATA GCG TATCAGGGGGAAG TGCTTAACGCGAAAT rhtC 3771548 - 3770928 - | threonine efflux system recQ 3773441 - 3771612 - | ATP-dependent DNA helicase TERM 4928 3771811 - 3771827 + g 71 -9.5 -3.5394 | opp_overlap 3771810 TCATCAGCAATGGAT TTACGCA GTT TGCGTAA TTTGGCGAACAGTTT TERM 4929 3772196 - 3772184 - G 73 -9.1 -3.58037 | opp_overlap 3772183 GACCAATGGTGGAAA GCGCA ATC TGCGC ATCGGTTGAACCGTC TERM 4930 3773490 - 3773469 - R 100 -12.3 -5.27335 | overlap 3773463 TGCCTGAAATAAAAA CAGGCGCTA TTTT CAGCGCCTG CGCGAGAAACTGCAA EFER_3680 3773993 - 3773511 - | hypothetical protein pldA 3774911 - 3774042 - | outer membrane phospholipase A TERM 4931 3774818 - 3774830 + g 74 -7.7 -4.011 | TGCCTCGTACCGCTG GTGCA TCA TGCAC TTCTTTCACTGTTGC yigI 3775075 - 3775542 + | hypothetical protein TERM 4932 3775571 - 3775547 - f 80 -11.6 -2.58544 | opp_overlap 3775553, overlap 3775546 3775553 TGGTAGGTTGATAAC GTAAAAGCAG GTAAA CTGCTTTTAC CAATAAAAAATGAGC TERM 4933 3775608 - 3775643 + G 74 -3.2 -4.89521 | gap 1, opp_overlap 3775610 3775611, overlap 3775611 AATGGATATCAAACA AACGCGGCAGG-GCG TATTACT CGCTCTTGCCGCTTA TTTTATTTGGGGTAT TERM 4934 3775611 - 3775640 + G 90 -9.3 -4.54026 | gap 1, opp_overlap 3775611 3775610, overlap 3775608 GGATATCAAACAAAC GCGGCAGG-GCG TATTACT CGCTCTTGCCGC TTATTTTATTTGGGG TERM 4935 3776017 - 3776030 + G 75 -6.7 -4.43477 | ATATGTGGTGTATTG GTCCA GCTC TGGAC TTTTGGTTCGCTGCC TERM 4936 3776396 - 3776386 - g 72 -4.6 -4.59773 | TTTTATGGTGAAAAA CCGG GAG CCGA TAAGATGGTGACTTT TERM 4937 3776403 - 3776415 + G 72 -5.5 -4.46112 | opp_overlap 3776403 GGGAGCCGATAAGAT GGTGA CTT TCGCC TTTATTTGGGTAGCG rarD 3775594 - 3776484 + | putative chloramphenicol resistance permease TERM 4938 3776509 - 3776538 + T 78 -10.1 -3.44051 | opp_overlap 3776496 3776509 TATATTCTGAAAAAA TATGCCTGCTCTT GCAT GAGAGTGGGCATA TTGTCATGCTGACAG TERM 4939 3776538 - 3776509 - T 77 -5 -5.04385 | opp_overlap 3776509, overlap 3776496 TATATTCTGAAAAAA TATGCCTGCTCT TGCATG AGAGTGGGCATA TTGTCATGCTGACAG EFER_3684 3776765 - 3776649 - | hypothetical protein yigF 3776974 - 3777354 + | conserved hypothetical protein; putative inner membrane protein TERM 4940 3777359 - 3777387 + T 78 -10.3 -3.25177 | opp_overlap 3777359 3777360, overlap 3777357 3777356 GGAGCCTTTGAATAA CTGGTGGCTTAGC CGG GCTAAACCACCAC TCTCGTTTTTTACAA TERM 4941 3777387 - 3777359 - T 100 -12.5 -3.62046 | opp_overlap 3777359 3777357 3777356, overlap 3777360 GGAGCCTTTGAATAA CTGGTGGCTTAGC CGG GCTAAACCACCAC TCTCGTTTTTTACAA TERM 4942 3777386 - 3777360 - T 100 -16 -2.77013 | opp_overlap 3777359 3777357 3777356, overlap 3777359 GAGCCTTTGAATAAC TGGTGGCTTAGC CGG GCTAAACCACCA CTCTCGTTTTTTACA corA 3778347 - 3777397 - | magnesium/nickel/cobalt transporter yigE 3778717 - 3779481 + | hypothetical protein TERM 4943 3779584 - 3779574 - g 100 -3.2 -5.85011 | opp_overlap 3779583 CAAAAATGAAAAAAA CGCT CGC AACG TTATTTTTATTAACG EFER_3688 3779564 - 3780466 + | conserved hypothetical protein; putative exported protein uvrD 3782683 - 3780521 - | DNA-dependent ATPase I and helicase II TERM 4944 3782633 - 3782611 - G 71 -9 -3.44051 | opp_overlap 3782616 3782618 CCGCCAGCACCAGAA GGTTGCTGCG TGG CGCGGCCACC GCTTCGCGCTGTTTG TERM 4945 3782616 - 3782644 + g 83 -10.1 -4.05714 | opp_overlap 3782611, overlap 3782618 AGCACCAGAAGGTTG CTGCGTGGCGCGG CCA CCGCTTCGCGCTG TTTGTCATTAAGGCT TERM 4946 3782618 - 3782642 + g 85 -11.3 -3.6217 | opp_overlap 3782611, overlap 3782616 CACCAGAAGGTTGCT GCGTGGCGCGG CCA CCGCTTCGCGC TGTTTGTCATTAAGG yigB 3783483 - 3782767 - | putative hydrolase TERM 4947 3783071 - 3783099 + g 91 -11 -4.1552 | overlap 3783061 3783091 AGTTCCGGCTGGGCG TTGCCGTTGGTG ATCGC CACCAGCGGCCA TTTCTTCGCCAGCTG xerC 3784379 - 3783483 - | site-specific tyrosine recombinase TERM 4948 3784028 - 3784041 + g 77 -6.7 -4.57569 | GCAGCCGATTCATAT CATCG ACGT CGATG TTTTTCGGCAGATGA TERM 4949 3784233 - 3784251 + g 70 -5.8 -4.18018 | overlap 3784241 CGTCACATCACATTG CTGCCAGC TTT GCAGGCCG TTTTCGCTGGCAAAA yigA 3785083 - 3784376 - | hypothetical protein TERM 4950 3784860 - 3784821 - G 70 -10.8 -2.72324 | overlap 3784820 3784829 3784832 TGCAGGTAAAGTAAG CGATAGAACAAGCCTTCG TTGG CGATAGCCTGTTCCATCA ACAGCGCCATGTTCT TERM 4951 3784928 - 3784965 + g 76 -12.8 -2.64099 | gap 1, opp_overlap 3784928 3784933, overlap 3784927 GTGCCACTCGACCAA CGAAACG-GTGCCGCGT ACCGG ATGCGGCACACGTATCG CTTCTACTGCGCGCG TERM 4952 3784965 - 3784928 - G 74 -10.6 -3.16564 | gap 1, opp_overlap 3784928 3784927, overlap 3784933 GTGCCACTCGACCAA CGAAACG-GTGCCGCGT ACCGG ATGCGGCACACGTATCG CTTCTACTGCGCGCG TERM 4953 3784960 - 3784933 - G 72 -7.7 -3.95852 | gap 1, opp_overlap 3784928 3784927, overlap 3784928 ACTCGACCAACGAAA CG-GTGCCGCGT ACCGG ATGCGGCACACG TATCGCTTCTACTGC dapF 3785904 - 3785080 - | diaminopimelate epimerase yifL 3786144 - 3785941 - | putative lipoprotein EFER_3695 3786303 - 3787811 + | conserved hypothetical protein; putative exported protein EFER_3696 3787808 - 3789121 + | conserved hypothetical protein; putative exported protein cyaY 3789184 - 3789504 + | frataxin, iron-binding and oxidizing protein cyaA 3792090 - 3789544 - | adenylate cyclase TERM 4954 3789928 - 3789948 + g 75 -6.8 -4.30987 | overlap 3789924 GTGATTGGTTTCAAC CTGCACTG ACAGG CCGTGCAG TTTGTTATGCGAAAT TERM 4955 3792037 - 3792021 - G 77 -11.5 -3.16564 | opp_overlap 3792020 3792022 GTCCCATTGCAGCAA GCGCGCG ATC CACGCGC AGTTGGTTAATGGCA hemC 3792455 - 3793396 + | hydroxymethylbilane synthase TERM 4956 3793792 - 3793774 - g 74 -7.4 -4.08945 | AGTATTGCGGGAAAA CGCGCA CTGATTT TGCGCG GTAACGGCGGCCGTG hemD 3793393 - 3794133 + | uroporphyrinogen III synthase TERM 4957 3794271 - 3794253 - g 87 -4.5 -5.31158 | GAAAAAAAGTAAAAA CAGTACC GCGCT GGTCCTG AGTGCTGTGGCTATT TERM 4958 3794386 - 3794351 - g 74 -8.2 -3.90291 | opp_overlap 3794356 3794357, overlap 3794334 3794332 AGTCTGTTAATCAAA CTGCCACCAGCGAAGC ACTG GCTTTGCAGGTTACAG CGTTACAAAAAGCGC hemX 3794155 - 3795330 + | putative uroporphyrinogen III methylase hemY 3795333 - 3796529 + | putative protoheme IX synthesis protein TERM 4959 3796534 - 3796556 + GF 100 -12.1 -5.0133 | opp_overlap 3796534 3796530 CGCCACAGTAATTTA TATCGCCTC GTTCA GAGGCGATA TTTTTTACAAGGATG TERM 4960 3796556 - 3796534 - gf 83 -12.1 -2.58714 | opp_overlap 3796534, overlap 3796530 CGCCACAGTAATTTA TATCGCCTC GTTCA GAGGCGATA TTTTTTACAAGGATG TERM 4961 3796637 - 3796654 + GF 73 -4.1 -4.80882 | ATTAATCCTGTTCGG GCAAGGT TGTT GCTTTGC TTTTTGATATGCGCT TERM 4962 3796802 - 3796789 - gf 75 -4.5 -4.81357 | ACAGGAGAAAATAAA GCTCC TCGA GAAGC GGCGAATCATGGCCG EFER_3704 3796322 - 3797167 + | hypothetical protein TERM 4963 3797198 - 3797173 - f 100 -11.9 -5.64274 | TCAGCCATAAAAAAA CGCCTGCTC TTATTACG GAGCAGGCG TTAAAACAGGTCTGT TERM 4964 3797846 - 3797866 + G 77 -9.7 -3.56704 | overlap 3797848 CACCCAAACTTATTG TGGTCGCAG TCG CTGCGGCTA TTCCTTTACTGGCCA TERM 4965 3797848 - 3797864 + G 72 -10.1 -3.35849 | overlap 3797846 CCCAAACTTATTGTG GTCGCAG TCG CTGCGGC TATTCCTTTACTGGC TERM 4966 3798041 - 3798026 - g 72 -4.6 -4.70921 | overlap 3798027 CACAAGACAAAGAAA CCCAGC AGAA GCTGGC AGAACTTGAGAAAAA aslA 3797815 - 3799470 + | arylsulfatase-like enzyme TERM 4967 3799538 - 3799556 + T 100 -8.8 -5.37865 | opp_overlap 3799537 GGCAATCAACCACAG GCGGCC TCCAAAC GGCCGC TTTTTTACTTATTCA aslB 3800796 - 3799561 - | regulator of arylsulfatase activity TERM 4968 3800934 - 3800919 - R 100 -11.8 -5.8901 | ACAGAAAACAAAAAA CCCCGC CGAA GCGGGG TTCAAAATTGGTCGG yifK 3802868 - 3801483 - | putative amino acid transporter TERM 4969 3801905 - 3801921 + g 72 -5.7 -4.56597 | AAACTTTCGCCATCG CCGCCGG TAA CTGACGG TTTTTCGCCAGCGCG TERM 4970 3802376 - 3802396 + g 71 -10.5 -2.87051 | opp_overlap 3802376, overlap 3802375 CCAGGCCAATGACAA TCATCACGA TAA TCGTGGTGA CTTTGATCATCGCGA TERM 4971 3802542 - 3802532 - G 77 -8.2 -4.06892 | opp_overlap 3802531 3802528 AGAACTGGACATAAA CGCC AAT GGCG GTGATTTCTGAGATC TERM 4972 3802897 - 3802909 + r 73 -9.1 -3.57039 | GTGTTTGCATGCTTT CCGGT GTT ACCGG TTATCGTTATGGGTA TERM 4973 3803017 - 3803040 + r 83 -11 -3.53012 | opp_overlap 3803012 3803010 TAAAAAGACAGGCAG GCGACGAAGT GACC ACTCCGTCGC TTTACAGAGAGAGGA rffM 3803799 - 3803059 - | UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4974 3803541 - 3803554 + g 72 -4.5 -4.68593 | overlap 3803522 CAACGCGGGAAACCT GTGCC TGCG GGTAC TTTTTACGTACTGAA wzyE 3805154 - 3803802 - | putative Wzy protein involved in ECA polysaccharide chain elongation TERM 4975 3804621 - 3804606 - G 71 -3.2 -4.77036 | GCTGACGAGGAAAAA CAGCCA CGCT TTGCTG TCCTGGCGCAGAAAG rffT 3806230 - 3805151 - | TDP-Fuc4NAc:lipidIIFuc4NAc transferase TERM 4976 3805875 - 3805861 - G 79 -2.1 -5.26316 | GCAGCGGATAAAAAA GCTTA TATCT CAAGC CACTGGAAAGCTCAT TERM 4977 3806178 - 3806168 - G 70 -4.6 -4.57073 | opp_overlap 3806164 CACGTCGTTGAAAAA CCGC AGA ACGG TTTGGTTATGGTGAG wzxE 3807477 - 3806227 - | O-antigen translocase TERM 4978 3807363 - 3807343 - G 76 -11.1 -3.36289 | GAGCACGGTAATCAA CTGGCGGAA ATT TGCCGCCAG CCCAAGCCCCGCCGG rffA 3808609 - 3807479 - | TDP-4-oxo-6-deoxy-D-glucose transaminase rffC 3809288 - 3808614 - | TDP-fucosamine acetyltransferase TERM 4979 3808889 - 3808902 + g 74 -8.1 -4.08216 | opp_overlap 3808888 3808887 ATTGATGATCAAAGG TGCCG CGCA CGGCA TTTTCAACCCACTGC rffH 3810147 - 3809266 - | glucose-1-phosphate thymidylyltransferase rffG 3811233 - 3810166 - | dTDP-glucose 4,6-dehydratase TERM 4980 3810711 - 3810741 + g 74 -7.5 -4.07885 | gap 1 GGCCGTAGGTCCGCA GCCAGGCGCGCACC AGAT GGT-CGCTGCTGGC TTTTGAAGCAGAATA rffD 3812495 - 3811233 - | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase TERM 4981 3812317 - 3812302 - G 76 -3.9 -5.00616 | CTCGCTCGTAAAAAA CCGCC TTCTAC GGCAG TTTTTACTACGCTCG rffE 3813622 - 3812492 - | UDP-N-acetyl glucosamine-2-epimerase TERM 4982 3812931 - 3812949 + g 78 -8.9 -4.15044 | TGCGTGGTGGCGATG TCTGCCA GTGCA TGGCAGA TTTCTTCAAAACCAC TERM 4983 3813667 - 3813642 - R 100 -18.3 -3.61517 | opp_overlap 3813639 3813662 3813666 ATTCTCTTCGAATAA GCGGCGAGCGC CTTT GCGCTCACCGC AGCAGTGTTGCTATT wzzE 3814724 - 3813678 - | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein TERM 4984 3813989 - 3814011 + g 78 -10.6 -3.44051 | GTTCCTCCGCTGGCA CATCTGTCGC ACT GCGAGAGATG TTATGCTGCTCGGCA TERM 4985 3814310 - 3814330 + g 72 -11.1 -3.02144 | opp_overlap 3814314 3814315, overlap 3814315 TGATCATTTCATCCA GCAACGCCG CAT CGGCTTTGC TGTTCCCGACCATCC TERM 4986 3814315 - 3814325 + g 74 -8.2 -3.92324 | opp_overlap 3814314 3814315, overlap 3814310 ATTTCATCCAGCAAC GCCG CAT CGGC TTTGCTGTTCCCGAC rfe 3815839 - 3814736 - | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase TERM 4987 3814773 - 3814783 + g 70 -6.8 -4.11751 | overlap 3814781 CCACCACGATTTCTA CGCA GTC TGCG TTTTACGCGCTTAAT TERM 4988 3815819 - 3815803 - G 100 -8.1 -5.7946 | TCGTGAATAAAAAAA TACTGAT GAG ATCAGTA CTCACTGTCAGTAAA TERM 4989 3816052 - 3816023 - R 100 -13.7 -3.38183 | opp_overlap 3816028, overlap 3816028 TTACAGATATAAAAG TAAAACGCCACGT AAAT ACGTGGCGTTTTT GGCATAAAACAAATT TERM 4990 3816047 - 3816028 - R 100 -13.6 -4.75518 | opp_overlap 3816028, overlap 3816023 GATATAAAAGTAAAA CGCCACGT AAAT ACGTGGCG TTTTTGGCATAAAAC TERM 4991 3816028 - 3816047 + r 100 -13.6 -4.62069 | opp_overlap 3816028 3816023 GATATAAAAGTAAAA CGCCACGT AAAT ACGTGGCG TTTTTGGCATAAAAC rho 3817326 - 3816067 - | transcription termination factor TERM 4992 3816923 - 3816935 + g 70 -4.1 -4.63486 | TGCAGCGGGGTTAAG TTCTC AAA GAGGA TTTTGTTGCGGGCGT trxA 3817980 - 3817651 - | thioredoxin 1 TERM 4993 3818859 - 3818841 - g 100 -7.4 -5.5604 | opp_overlap 3818842, overlap 3818842 CTAACGAAGAAAAAA TGCGTTTG CTG CAAACGCT GATTGAAGAAGAATG TERM 4994 3818858 - 3818842 - g 86 -10.9 -3.91997 | opp_overlap 3818842, overlap 3818841 TAACGAAGAAAAAAT GCGTTTG CTG CAAACGC TGATTGAAGAAGAAT TERM 4995 3818842 - 3818858 + G 70 -10.9 -2.71011 | opp_overlap 3818842 3818841 TAACGAAGAAAAAAT GCGTTTG CTG CAAACGC TGATTGAAGAAGAAT rhlB 3818111 - 3819376 + | ATP-dependent RNA helicase gpp 3819512 - 3820996 + | guanosine pentaphosphatase/exopolyphosphatase TERM 4996 3821006 - 3821039 + T 78 -9.5 -3.62723 | opp_overlap 3820998 3821004 3821006 3821007, overlap 3821001 3821007 CATTAAAGAGTAATA TGCTGGGTGCGATGC TCGC GCATCTTACCCGGCC TTGATTATTTCCCTC TERM 4997 3821007 - 3821038 + T 91 -13 -2.76911 | opp_overlap 3820998 3821007 3821006 3821004, overlap 3821006 3821001 ATTAAAGAGTAATAT GCTGGGTGCGATGC TCGC GCATCTTACCCGGC CTTGATTATTTCCCT rep 3823065 - 3821044 - | DNA helicase and single-stranded DNA-dependent ATPase TERM 4998 3821208 - 3821223 + g 81 -10.4 -3.90922 | opp_overlap 3821182 3821205 CCGGGCGCACAAGTT CGCCGT ACTG ACGGCG TTCTTTACACAGCGT TERM 4999 3821527 - 3821554 + g 84 -10.6 -3.72592 | GCCTTCCAGCATCTC CGTCATCCAGCT AAAC AGTTGGTTGACG TTCTTCATGCGCATT TERM 5000 3822601 - 3822623 + g 72 -6.9 -4.17425 | CCGCTCGCCCTTTGC CTCTGCCGC CGCCT GCGCCGGAG TTTTGAGATCGTTCT ppiC 3823152 - 3823433 + | peptidyl-prolyl cis-trans isomerase C (rotamase C) TERM 5001 3823464 - 3823436 - T 100 -16.1 -3.24825 | opp_overlap 3823430, overlap 3823437 3823440 GTACCGTAACTAACA GCAAGGCCTTCTC CAG GAGAAGGCCTTGA ACTCTGAATCTCTAT TERM 5002 3823463 - 3823437 - T 100 -19.6 -2.54574 | opp_overlap 3823430, overlap 3823436 3823440 TACCGTAACTAACAG CAAGGCCTTCTC CAG GAGAAGGCCTTG AACTCTGAATCTCTA TERM 5003 3823460 - 3823440 - T 100 -15.5 -3.42147 | opp_overlap 3823430, overlap 3823437 3823436 CGTAACTAACAGCAA GGCCTTCTC CAG GAGAAGGCC TTGAACTCTGAATCT ilvC 3824954 - 3823479 - | ketol-acid reductoisomerase, NAD(P)-binding TERM 5004 3824151 - 3824165 + g 75 -11.4 -3.12402 | overlap 3824141 CATCAGGGTGATGCC GCCCTG CTT CAGGGC TTCGGTGATGGTTTC TERM 5005 3825138 - 3825153 + G 83 -10.4 -4.12188 | opp_overlap 3825126 3825127 3825147 3825148 AAACCTTCCTGCATC TGGCGG AAAG CCGCCA TTTTGGCCGTAGTGC TERM 5006 3825956 - 3825940 - g 100 -9.4 -5.60993 | opp_overlap 3825940 3825952 GTGTGCACAAAAAAA GCGGCT GCATG AGCCGC TGATTGAGGCTTTCT ilvY 3825020 - 3825994 + | DNA-binding transcriptional dual regulator ilvA 3827535 - 3825991 - | threonine deaminase TERM 5007 3827291 - 3827301 + g 79 -2.4 -5.30348 | GCCGAGGCAGTGATC ACGC CAT GCGC TTTTTGTTCTTCCGT ilvD 3829388 - 3827538 - | dihydroxyacid dehydratase TERM 5008 3829442 - 3829421 - R 89 -11.6 -3.53012 | opp_overlap 3829421 TGTCTGTCTCGTAAA TGGGACGG TGCGTG CCGTCCCA TTTTTTGTATTTATT TERM 5009 3829421 - 3829442 + r 100 -12.3 -5.61913 | opp_overlap 3829421 TGTCTGTCTCGTAAA TGGGACGGT GCGT GCCGTCCCA TTTTTTGTATTTATT ilvE 3830382 - 3829453 - | branched-chain amino-acid aminotransferase ilvM 3830665 - 3830402 - | acetolactate synthase II, small subunit ilvG 3832308 - 3830662 - | Acetolactate synthase isozyme II large subunit (ALS-II) (Acetohydroxy-acid synthase II large subunit) (AHAS-II) TERM 5010 3830712 - 3830693 - G 73 -11.4 -2.72227 | opp_overlap 3830697 AACATTTCTGAATTA CTGGCGCC AGGC GGCACCAG CGGCCAGACGTTCTC TERM 5011 3831505 - 3831494 - G 70 -5.8 -4.25283 | ACCCGGTCATCAAAA CGTG CACC CACG GAGATCAACAAGTCA TERM 5012 3832399 - 3832426 + r 83 -11.2 -3.45366 | opp_overlap 3832401, overlap 3832401 3832424 TTAAGGTCAAAAAAA AACCCCCGGACC TTTC GGTGCGGGGGTC TTAGTTCGTTAAGGC TERM 5013 3832401 - 3832424 + r 100 -13.8 -3.29727 | opp_overlap 3832401, overlap 3832399 AAGGTCAAAAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TCTTAGTTCGTTAAG TERM 5014 3832424 - 3832401 - R 100 -13.8 -6.10489 | opp_overlap 3832401 3832399 AAGGTCAAAAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TCTTAGTTCGTTAAG ilvL 3832547 - 3832449 - | ilvG operon leader peptide TERM 5015 3832648 - 3832671 + H 74 -4 -5.00616 | opp_overlap 3832654 TTTTTATGATGTCTT TAATAATTTC AAGA GAAATTGTTG TTTTTTAAAAAGAAA TERM 5016 3833047 - 3833032 - g 70 -6 -4.22535 | opp_overlap 3833045 ACAACGGTAAAAGAA GCTCGC GATC GCGTGC GCAGCGCCATTATCA TERM 5017 3833528 - 3833516 - g 71 -10.5 -2.93089 | overlap 3833513 GAGGACTGGAAATTA CCGCC GCT GGCGG GCACAACCTTTTACT yifB 3832870 - 3834420 + | putative bifunctional enzyme and transcriptional regulator TERM 5018 3834438 - 3834426 - T 100 -6.9 -5.72616 | opp_overlap 3834420 3834426 ACTGACATAAAAAAA GGGCA TTT CGCCC TTTTTATTAATCGTC TERM 5019 3834426 - 3834438 + T 87 -6.2 -5.15167 | opp_overlap 3834426, overlap 3834420 ACTGACATAAAAAAA GGGC ATTTC GCCC TTTTTATTAATCGTC yifE 3834783 - 3834445 - | hypothetical protein hdfR 3834902 - 3835741 + | DNA-binding transcriptional regulator TERM 5020 3835810 - 3835829 + F 79 -10.8 -3.00946 | opp_overlap 3835810, overlap 3835807 TACAAACAAAAAAAA TCCTTAGC TTTC GCTAAGGA TGATTTCTGGCAGGG TERM 5021 3835829 - 3835810 - f 100 -10.8 -6.28967 | opp_overlap 3835807 3835810 TACAAACAAAAAAAA TCCTTAGC TTTC GCTAAGGA TGATTTCTGGCAGGG TERM 5022 3839230 - 3839254 + F 74 -8 -3.93061 | gap 1, opp_overlap 3839236 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 5023 3839457 - 3839470 + F 76 -6.7 -4.41177 | overlap 3839422 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 5024 3841249 - 3841261 + F 74 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 5025 3841281 - 3841295 + F 78 -4.2 -5.0916 | opp_overlap 3841281, overlap 3841271 3841282 CTCTTTCAGAGTCAA CCCTGA GTT TCAGGA TTTTTCTCTTCAACC TERM 5026 3841282 - 3841294 + F 70 -7.7 -3.64773 | opp_overlap 3841281, overlap 3841271 3841281 TCTTTCAGAGTCAAC CCTGA GTT TCAGG ATTTTTCTCTTCAAC TERM 5027 3841568 - 3841550 - f 71 -2.4 -5.20783 | opp_overlap 3841558, overlap 3841552 ATTGAAAGAGAAAAA TTCGCG AGCGTTG CGCAAA CGTTTTCGTTACAAT TERM 5028 3841613 - 3841654 + F 100 -20.5 -2.96216 | opp_overlap 3841602 3841600, overlap 3841602 3841615 AGGATGCCCCGTTAG GGGCGTTAGCTGAGTTTTT CGCG AAAAATTCAGCTAACGCTC TCTGTAATAGTCAAA TERM 5029 3841615 - 3841652 + F 100 -19.5 -3.03443 | opp_overlap 3841602 3841600, overlap 3841602 3841613 GATGCCCCGTTAGGG GCGTTAGCTGAGTTTTT CGCG AAAAATTCAGCTAACGC TCTCTGTAATAGTCA purH 3841685 - 3843274 + | fused IMP cyclohydrolase ; phosphoribosylaminoimidazolecarboxamide formyltransferase TERM 5030 3844467 - 3844494 + G 77 -11.3 -3.15249 | opp_overlap 3844474, overlap 3844474 GCTGGGTCATACCGT GGCAGAAGCGC AGAAAC GCGCTTATGCC TTAATGACCGATATC purD 3843286 - 3844575 + | phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase zraR 3845897 - 3844572 - | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator ; sigma54 interaction protein TERM 5031 3844621 - 3844648 + g 90 -10.4 -4.4009 | opp_overlap 3844621 GTAATCCCTAACTGA CGGGCGGCTTCG GTTT TGTTGCCGCCCG TTTTCTCCAGTGCCG TERM 5032 3845290 - 3845324 + g 72 -4.9 -4.67353 | gap 1, opp_overlap 3845275, overlap 3845291 GATTCCAGCAAGGAT TCGTTGAGTGCCGCAC AGTT GAGCGTCAC-CAGCGG TTTTTCGCTACGTGC zraS 3847270 - 3845894 - | sensory histidine kinase in two-component regulatory system with ZraR TERM 5033 3847364 - 3847419 + H 93 -13.7 -2.70232 | gap 1, opp_overlap 3847378, overlap 3847378 ACAAAGGCTTAAGTT TCAATGAGTAAAAATGACTCGC-TAC ACACA GCAGGCGAGTCATTTTTACTCGTTTA TCATGTCATATTGCC TERM 5034 3847405 - 3847378 - H 85 -7.1 -4.81083 | gap 1, opp_overlap 3847364 3847378 TTCAATGAGTAAAAA TGACTCGC-TAC ACACA GCAGGCGAGTCA TTTTTACTCGTTTAT TERM 5035 3847378 - 3847405 + H 74 -4.9 -4.85267 | gap 1, opp_overlap 3847378, overlap 3847364 TTCAATGAGTAAAAA TGACTCGC-TAC ACACA GCAGGCGAGTCA TTTTTACTCGTTTAT zraP 3847508 - 3847933 + | Zn-binding periplasmic protein yjaH 3848630 - 3847935 - | hypothetical protein TERM 5036 3848597 - 3848612 + g 72 -10.4 -3.35639 | opp_overlap 3848597 GCCAGAAAGACAAAA GGGGTG AAAC CACCCC TTCGTTAAAACTGTT TERM 5037 3848612 - 3848597 - G 100 -10.4 -4.84918 | opp_overlap 3848597 GCCAGAAAGACAAAA GGGGTG AAAC CACCCC TTCGTTAAAACTGTT hupA 3848915 - 3848643 - | HU, DNA-binding transcriptional regulator, alpha subunit yjaG 3849692 - 3849102 - | hypothetical protein nfi 3850406 - 3849735 - | endonuclease V TERM 5038 3849997 - 3850007 + g 74 -2.4 -5.08824 | opp_overlap 3849997 AGCGGTTCGAATTTA CCGC AGA GCCG TTTTTTCGCTACGCC TERM 5039 3850319 - 3850331 + g 72 -7.7 -3.89822 | overlap 3850308 CGGCTCCGGCGATCA GATCC GGC GGATC TTTATCGAGTCGATC hemE 3851480 - 3850416 - | uroporphyrinogen decarboxylase TERM 5040 3851362 - 3851347 - G 74 -6 -4.56358 | opp_overlap 3851348, overlap 3851348 CACAGCGACATAAAA TCGCCC GCCT GGGCGC GCGTGGCTTTATATT nudC 3852293 - 3851520 - | NADH pyrophosphatase TERM 5041 3852236 - 3852272 + g 75 -4.3 -4.78149 | opp_overlap 3852235, overlap 3852239 3852241 TCGGCAACCATAATT TTTGTTCATGGCTGACG ACC CACCAGCCGTGATCTAA TTTTTCAATTATACG rsd 3852388 - 3852864 + | stationary phase protein, binds sigma 70 RNA polymerase subunit TERM 5042 3852899 - 3852914 + F 86 -11.8 -3.15008 | opp_overlap 3852898, overlap 3852897 TAATTTACATTCAAC GCCCCG TTTG CGGGGC TAATTTCTTGTCGGA TERM 5043 3854644 - 3854621 - g 70 -6 -4.22554 | CTACCTAATAAAGAA GATGTTAAGC AGGG GCTTATCACC TATAAGATTGCCGCC thiC 3853097 - 3854992 + | thiamin (pyrimidine moiety) biosynthesis protein thiE 3854992 - 3855627 + | thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) TERM 5044 3856326 - 3856304 - g 73 -9.1 -3.65514 | overlap 3856305 GGTAAATTAAACCAA TGGCGCAAC CTGGC GTTGCGCCG CGCTACAGGTTGCCC TERM 5045 3856325 - 3856305 - g 77 -12.6 -2.78586 | overlap 3856304 GTAAATTAAACCAAT GGCGCAAC CTGGC GTTGCGCC GCGCTACAGGTTGCC thiF 3855620 - 3856375 + | thiamin (thiazole moiety) biosynthesis protein thiS 3856359 - 3856559 + | sulphur carrier protein TERM 5046 3857086 - 3857049 - g 70 -10.5 -2.76492 | opp_overlap 3857052 3857081, overlap 3857037 3857048 3857080 3857081 TCAGGGACTGGAAAC CCGCGCCATGCTGGAGA TTAT TATCCAGCAAGCCACGG TTCCGGTGGTCGTTG thiG 3856561 - 3857331 + | thiamin biosynthesis ThiGH complex subunit thiH 3857328 - 3858461 + | thiamin biosynthesis ThiGH complex subunit TERM 5047 3858514 - 3858537 + T 88 -3.1 -5.82172 | ACGGAAGATGAAAAA CGCAAGGTT GTTGAA AGCGTTGCG TTTTTTTATGTTAGT TERM 5048 3858663 - 3858676 + T 100 -9.5 -4.8384 | opp_overlap 3858663 ACACCCATAAAAAAA CCCGC CGAA GCGGG TTTTTACGTTATTTG TERM 5049 3858676 - 3858663 - T 100 -9.5 -5.65177 | opp_overlap 3858663 ACACCCATAAAAAAA CCCGC CGAA GCGGG TTTTTACGTTATTTG rpoC 3862926 - 3858703 - | RNA polymerase, beta prime subunit TERM 5050 3861091 - 3861075 - G 78 -7.9 -4.40561 | GGTCCGCAAAAATAA CGGTCGG TTT CAGACCG AGAATGCGGTAGCAG TERM 5051 3861586 - 3861570 - G 72 -7.9 -3.87373 | opp_overlap 3861569 3861566 3861576 TATATGCCGCACAAA CCAGCGG GTG CAGCTGG ATAGCTTTACCTTCG TERM 5052 3862984 - 3862955 - R 76 -9.2 -3.4252 | opp_overlap 3862955, overlap 3862956 TCGGAGTTAGCACAA TCCGCTGCCGGG TTTTAC CCCGACAGCAGT GACCTGTTTGAGCGA TERM 5053 3862983 - 3862956 - R 88 -12.7 -2.65298 | opp_overlap 3862955, overlap 3862955 CGGAGTTAGCACAAT CCGCTGCCGGG TTTTAC CCCGACAGCAG TGACCTGTTTGAGCG rpoB 3867031 - 3863003 - | RNA polymerase, beta subunit TERM 5054 3863101 - 3863111 + g 74 -3.2 -4.91459 | overlap 3863108 CCATCTGATGGTTGC CGTC CAC GATG TTTTTATACATCTTG TERM 5055 3863913 - 3863925 + g 74 -7.7 -4.12942 | CCCGGTGCCAGATCG TCACC CTG GGTGA TTTTGCGGCGTTTCG TERM 5056 3863989 - 3864005 + g 86 -6.5 -5.10033 | overlap 3863990 CGTCATACTGCTCAG CCAGCTG TTC CAGCTGA TTTTGTTTCTCTTCG TERM 5057 3863990 - 3864004 + g 77 -10 -3.64393 | overlap 3863989 GTCATACTGCTCAGC CAGCTG TTC CAGCTG ATTTTGTTTCTCTTC TERM 5058 3866215 - 3866236 + g 75 -4.3 -4.87665 | gap 1 CCAGCTGGCGAATGT GGCGCGCAGT AAT GCGGCG-GCC TTTTTCTACGTACAC TERM 5059 3867311 - 3867286 - R 100 -17.7 -4.64766 | opp_overlap 3867279 3867275 3867274, overlap 3867306 CTTACAGCGCAAAAA GGCTGGTGACT AAAA AGTCACCAGCC ATCAGCCTGATTTCT rplL 3867716 - 3867351 - | 50S ribosomal subunit protein L7/L12 rplJ 3868280 - 3867783 - | 50S ribosomal subunit protein L10 rplA 3869397 - 3868693 - | 50S ribosomal subunit protein L1 TERM 5060 3868854 - 3868894 + g 74 -3.1 -4.98255 | opp_overlap 3868862 CTTTCAGTTTGTCAG CGTCAAAGTCCACTTTACC GAT GGTGGTGTGGATGATGCCG TTTTTGTCGTTGCGG rplK 3869829 - 3869401 - | 50S ribosomal subunit protein L11 TERM 5061 3869505 - 3869528 + g 77 -8.2 -4.13343 | gap 1, overlap 3869523 CTTTGGTCTGCGCGA TTTCCTGCAGC TGA GC-GCGGGAAA TTTTACCCACTTTGT TERM 5062 3869917 - 3869888 - R 91 -7.3 -5.36441 | gap 1, overlap 3869890 3869915 CCGTGATATAAAAAA TCGTTT-TACGGGC AAG GCCCATAAAAACAA AAGGCGCGAAATTGT TERM 5063 3869953 - 3869915 - R 100 -16.9 -4.8543 | opp_overlap 3869920, overlap 3869888 3869920 CAAGGCCCATAAAAA CAAAAGGCGCGAAATTG TATTC CAATCTCGCGCCTTGTG CAACGATTAAATCGC TERM 5064 3869948 - 3869920 - R 100 -15.4 -5.35224 | opp_overlap 3869920, overlap 3869915 CCCATAAAAACAAAA GGCGCGAAATTG TATTC CAATCTCGCGCC TTGTGCAACGATTAA TERM 5065 3869920 - 3869948 + r 100 -13.2 -3.30159 | opp_overlap 3869920 3869915 CCCATAAAAACAAAA GGCGCGAAATTG TATTC CAATCTCGCGCC TTGTGCAACGATTAA TERM 5066 3869953 - 3869971 + r 75 -3 -5.1675 | AATCTCGCGCCTTGT GCAACGAT TAA ATCGCCGC TTTTTTGATCGCTGG nusG 3870533 - 3869988 - | transcription termination factor secE 3870918 - 3870535 - | preprotein translocase membrane subunit TERM 5067 3870626 - 3870612 - G 73 -11.4 -2.65264 | GGATCAGTGACATTA CTGCGG TAA CCGCAG CCACAATCAGCGTGG TERM 5068 3870715 - 3870726 + g 70 -4.4 -4.5442 | opp_overlap 3870715 ACGGGCAAAAGCAAC GGTA GCTT TACC TTTTGTCGTTAACAG TERM 5069 3871084 - 3871125 + r 100 -14.5 -3.0792 | opp_overlap 3871085 3871096, overlap 3871096 AGGTTCTGGTACGAA AGCGTGCAAAAAGGGCATC AAAT GATGCCCTTTTAGTGCGCA TTGCGTCAAATGTTA TERM 5070 3871124 - 3871085 - R 100 -13.6 -3.72576 | opp_overlap 3871084 3871096, overlap 3871096 GGTTCTGGTACGAAA GCGTGCAAAAAGGGCATC AAAT GATGCCCTTTTAGTGCGC ATTGCGTCAAATGTT TERM 5071 3871113 - 3871096 - R 100 -11.3 -4.60924 | opp_overlap 3871084 3871096, overlap 3871085 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTAGTGCGCATTG TERM 5072 3871096 - 3871113 + r 100 -11.3 -4.2679 | opp_overlap 3871096 3871085, overlap 3871084 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTAGTGCGCATTG tufB 3872332 - 3871148 - | protein chain elongation factor EF-Tu (duplicate of tufA) TERM 5073 3872286 - 3872302 + g 70 -4.4 -4.4715 | gap 1, opp_overlap 3872286 ACGTGGCCGATAGTA CCG-ACG TTAA CGTGCGG TTTTGTACGTTCAAA TERM 5074 3872648 - 3872660 + H 76 -7.7 -4.15222 | opp_overlap 3872644 TCTGCACTGAATATC GAGAG AAG CTCTC TTTATTCGAGCCGGT coaA 3873250 - 3874200 + | pantothenate kinase TERM 5075 3874207 - 3874224 + T 100 -12.7 -4.80417 | CGCAAATAATTTGCA GGGGAGC TAAT GCTCCCC TTTCTTATTTTTCTG birA 3875194 - 3874229 - | bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding TERM 5076 3874826 - 3874805 - G 74 -8.7 -3.95348 | opp_overlap 3874804, overlap 3874818 CATAGACAAATACAA GTTTGCGCC AAAA GGCGAAAAC CATTTCCGACCCCGG murB 3876219 - 3875191 - | UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding TERM 5077 3876311 - 3876345 + r 100 -13.7 -4.50627 | gap 1, opp_overlap 3876311 3876318, overlap 3876318 AGAGTTTGTAGAAAC GCAAAAAGGCCCAGTC TTCC GACTGGGCCTTCT-GC TTTATTTGATGCCTG TERM 5078 3876345 - 3876311 - R 100 -15.9 -2.92102 | gap 1, opp_overlap 3876311 3876318, overlap 3876318 AGAGTTTGTAGAAAC GCAAAAAGGCCCAGTC TTCC GACTGGGCCTTCT-GC TTTATTTGATGCCTG TERM 5079 3876318 - 3876339 + r 100 -15.9 -3.72242 | opp_overlap 3876318 3876311, overlap 3876311 GTAGAAACGCAAAAA GGCCCAGTC TTCC GACTGGGCC TTCTGCTTTATTTGA TERM 5080 3876339 - 3876318 - R 100 -15.9 -4.84529 | opp_overlap 3876311 3876318, overlap 3876311 GTAGAAACGCAAAAA GGCCCAGTC TTCC GACTGGGCC TTCTGCTTTATTTGA TERM 5081 3879535 - 3879559 + r 74 -8 -3.93061 | gap 1, opp_overlap 3879541 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 5082 3879762 - 3879775 + r 76 -6.7 -4.41177 | overlap 3879727 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC murI 3882603 - 3881746 - | glutamate racemase TERM 5083 3882546 - 3882498 - GR 79 -11 -2.94747 | gap 2, opp_overlap 3882502, overlap 3882479 3882526 GGATCTCATCATAGA CCGACAGCCCACCGACGCCGGAGT CAA ACACCAGCA-CGGTGGGACGT-GG TTCAGAAGGTGTAGC btuB 3884437 - 3882548 - | vitamin B12/cobalamin outer membrane transporter TERM 5084 3884376 - 3884363 - GH 70 -5.9 -4.18018 | overlap 3884349 TGCCGTGACGGAAAA CGCCG TCAG CAGCG AAGCTTTTTTAATCA TERM 5085 3885770 - 3885797 + G 72 -9.8 -3.3082 | opp_overlap 3885764 3885770, overlap 3885768 3885767 ATCTGGAAACATTAA GCCAGACGCACA AGGT TGAACGTCTGGC TCTGTTTGATCAATT TERM 5086 3885797 - 3885770 - g 82 -12 -3.45839 | opp_overlap 3885770 3885768 3885767, overlap 3885764 ATCTGGAAACATTAA GCCAGACGCACA AGGT TGAACGTCTGGC TCTGTTTGATCAATT trmA 3884761 - 3885861 + | tRNA (uracil-5-)-methyltransferase TERM 5087 3885895 - 3885864 - T 82 -8 -4.41494 | gap 1, opp_overlap 3885863, overlap 3885865 3885866 3885868 GACGGCGAAGTAAAA TCCATGCCGGATAGC ATC GC-ATCCGGCATGCC ACCTATTATTCTGTA TERM 5088 3885894 - 3885865 - T 86 -11.5 -3.24414 | gap 1, opp_overlap 3885863, overlap 3885864 3885866 3885868 ACGGCGAAGTAAAAT CCATGCCGGATAGC ATC GC-ATCCGGCATGC CACCTATTATTCTGT TERM 5089 3885893 - 3885866 - T 100 -15 -2.54166 | gap 1, opp_overlap 3885863, overlap 3885865 3885864 3885868 CGGCGAAGTAAAATC CATGCCGGATAGC ATC GC-ATCCGGCATG CCACCTATTATTCTG TERM 5090 3885891 - 3885868 - T 83 -11.8 -2.80479 | gap 1, opp_overlap 3885863, overlap 3885866 3885865 3885864 GCGAAGTAAAATCCA TGCCGGATAGC ATC GC-ATCCGGCA TGCCACCTATTATTC yijD 3886260 - 3885901 - | conserved hypothetical protein; putative inner membrane protein TERM 5091 3886065 - 3886052 - G 73 -3.7 -4.79955 | ACACCGAGAATAAAA CAGGC AGCA GCCAG TCCAGGCAACCCAAC fabR 3886910 - 3886260 - | DNA-binding transcriptional repressor TERM 5092 3886862 - 3886876 + g 100 -2.7 -6.01725 | opp_overlap 3886814 TAAATGCGGCTTCCA CCAGC GAACG GCGGG TTTTTTCTTTTTGTT EFER_3798 3888330 - 3887014 - | putative proton/ carboxylic acid permease TERM 5093 3887576 - 3887586 + g 72 -6.8 -4.21607 | opp_overlap 3887568 AGCAAGATACCGTTA GCGA TAG TCGC TTTATGTTGCATAAG TERM 5094 3887733 - 3887722 - G 93 -3.6 -5.46657 | CACGCCAATAAAAAA CGGC ACAC GCCA GCCCCATTCGGCCAT TERM 5095 3888276 - 3888289 + g 74 -2.3 -5.07486 | overlap 3888277 AGGCAAAAATCACCC GCCTG CCAC TGGGC TTTTTCTTCACACTC EFER_3799 3889540 - 3888374 - | Hippurate hydrolase (Benzoylglycine amidohydrolase) (Hippuricase) TERM 5096 3889687 - 3889676 - H 82 -2.2 -5.68489 | gap 1 GACAATAACAAAAAA GCACG CTT CG-GC AAGATAAAACCATCA sthA 3889870 - 3891270 + | pyridine nucleotide transhydrogenase, soluble oxyR 3892170 - 3891253 - | DNA-binding transcriptional dual regulator TERM 5097 3892356 - 3892374 + r 100 -11 -5.78622 | CCAACGTGAACTTTT GCGGATCT CCA GGATCCGC TTTTTTTTGCCATAA TERM 5098 3892412 - 3892394 - R 100 -9.5 -5.24129 | TTTTGCCATAAAAAA GCCCGGC GATAA GCCAGGC TCAAATTGGTACATA argH 3893810 - 3892437 - | argininosuccinate lyase argB 3894644 - 3893871 - | acetylglutamate kinase argC 3895659 - 3894655 - | N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding argE 3895813 - 3896964 + | acetylornithine deacetylase TERM 5099 3897011 - 3897055 + F 100 -14.6 -2.89607 | gap 1, opp_overlap 3897017 3897027, overlap 3897009 3897013 AAGGCGGTCCAGCCG CAGTAATGTCGGATAAGATGT TGAC GCATCTTATCCGACCT-ACTG TCATTCATATTTTGG TERM 5100 3897013 - 3897053 + F 83 -11.4 -2.98653 | gap 1, opp_overlap 3897017 3897027, overlap 3897011 3897009 GGCGGTCCAGCCGCA GTAATGTCGGATAAGATGT TGAC GCATCTTATCCGACCT-AC TGTCATTCATATTTT TERM 5101 3897050 - 3897017 - f 93 -12.6 -3.15544 | opp_overlap 3897013 3897011 3897009, overlap 3897027 GTCCAGCCGCAGTAA TGTCGGATAAGATG TTGACG CATCTTATCCGACC TACTGTCATTCATAT TERM 5102 3897277 - 3897235 - f 72 -7.6 -3.83205 | ACGGCCTATAGCAAA GTCCTGGATTTTTCCTGCCG CTA CGGCGTGAAAAGTACCGGAC ATATACAAAATAGAT TERM 5103 3897523 - 3897504 - g 77 -11.4 -3.13591 | opp_overlap 3897499 3897516 ACAAAATTTATCGAA CGACGAGC TATT GCCCGTCG CCCGCGCTTTTAGTC TERM 5104 3898339 - 3898324 - g 72 -4.6 -4.70879 | opp_overlap 3898324, overlap 3898316 CTGAAAGGGCAAAAA CTGCCG AAGC CGGAAG GTTTACTGACACAAA TERM 5105 3898470 - 3898484 + G 70 -10 -3.20573 | overlap 3898468 CGTAAAATGTTTCGG CGTACC GCT GGTACG TATTGATATCCGTCA TERM 5106 3898756 - 3898745 - g 70 -3.6 -4.62069 | TCTCGATGGCAAAAA CGCC GTCC GACG TACTGGCTGTACACC ppc 3897310 - 3899961 + | phosphoenolpyruvate carboxylase TERM 5107 3899980 - 3900001 + F 100 -15.9 -4.18934 | opp_overlap 3899980 CACTGCCTCTATAAA CCCTCGTGC AATC GCACGAGGG TTTCTTGAAATACTG TERM 5108 3900001 - 3899980 - f 100 -15.9 -3.86015 | opp_overlap 3899980 CACTGCCTCTATAAA CCCTCGTGC AATC GCACGAGGG TTTCTTGAAATACTG yijP 3900158 - 3901891 + | conserved hypothetical protein; putative inner membrane protein TERM 5109 3901981 - 3901935 - f 86 -11.6 -3.34344 | opp_overlap 3901921, overlap 3901936 3901977 3901978 CGACGCCTGAATGAA GCGTCTTATCCGGCCTACAG ATCGCGG CAGTAGGCCAGATAAGGCGT CTACGCCGCATCCGG TERM 5110 3901980 - 3901936 - f 100 -15.1 -2.60392 | opp_overlap 3901921, overlap 3901935 3901977 3901978 GACGCCTGAATGAAG CGTCTTATCCGGCCTACAG ATCGCGG CAGTAGGCCAGATAAGGCG TCTACGCCGCATCCG TERM 5111 3902047 - 3902067 + F 95 -7.6 -5.1861 | gap 1, overlap 3902063 ATCGAACTCCCATCA GGCCACACT TTTC AG-GTGGCC TTTTTTCATAATGCC TERM 5112 3902468 - 3902444 - g 72 -6.3 -4.37067 | opp_overlap 3902450 3902465, overlap 3902457 3902460 CAAACAGTATCAAAA TCTGGCGAAGC AAC ACGTCGCCCGA CGCGGCCCGCGCATT yijO 3902121 - 3902972 + | putative DNA-binding transcriptional regulator frwD 3903300 - 3902959 - | enzyme IIB component of PTS pflC 3904180 - 3903302 - | pyruvate formate lyase II activase pflD 3906443 - 3904146 - | putative formate acetyltransferase 2 (pyruvate formate lyase II) TERM 5113 3905712 - 3905697 - GR 78 -9 -3.8512 | CATGTACCAGAACAA CTGGCA CGCT TGCCAG AACGTCTGCGGCTTA frwB 3906814 - 3906494 - | putative enzyme IIB component of PTS frwC 3907904 - 3906825 - | enzyme IIC component of PTS TERM 5114 3908369 - 3908358 - g 72 -7.2 -4.19506 | opp_overlap 3908358 AGGGCAACGCCAAAA GCGC TCTT GCGC TGATTGGCACCGATA TERM 5115 3909724 - 3909745 + G 80 -11.7 -3.35679 | overlap 3909715 AATTATGATCCCGAT GATCTCTTC AATG GAAGAGATC TTATGGGTGAAAGAA TERM 5116 3910586 - 3910576 - g 72 -8.2 -3.71981 | AACACTGAACAAACA CGCC GCA GGCG ATCAACATATGCGCA ptsA 3908213 - 3910714 + | fused putative PTS enzymes: Hpr component ; enzyme I component ; enzyme IIA component TERM 5117 3911211 - 3911223 + G 71 -9.1 -3.53091 | GCCAGAAAGCATGGT GCTGG CTG CCAGC TTTAAAACACCGCGT fsaB 3910726 - 3911388 + | fructose-6-phosphate aldolase 2 gldA 3911399 - 3912502 + | glycerol dehydrogenase, NAD TERM 5118 3912514 - 3912531 + F 100 -12.7 -5.27923 | opp_overlap 3912514 ATAATCCACACCAAA CTCCCGC GTCA GCGGGAG TTTTTTATCCGCTTC TERM 5119 3912531 - 3912514 - f 100 -12.7 -3.86684 | opp_overlap 3912514 ATAATCCACACCAAA CTCCCGC GTCA GCGGGAG TTTTTTATCCGCTTC yijF 3912621 - 3913238 + | hypothetical protein yijE 3914168 - 3913263 - | putative permease TERM 5120 3913772 - 3913761 - G 77 -7.2 -4.53398 | overlap 3913769 CAACACCAAAAATAA GCCG AAAG CGGC AATCAGAATCGCCAA TERM 5121 3914252 - 3914220 - R 100 -18.6 -5.40474 | ACGCCGGTAAAAAAA CTTCAGCGACTGCC AGACA GACAGTCGCTGAAG AAGGTCAGATTACAG katG 3916442 - 3914262 - | catalase/hydroperoxidase HPI(I) TERM 5122 3916696 - 3916656 - R 100 -12.8 -4.16016 | opp_overlap 3916655 3916654 GTATTCTTCAAGAAA TGAGGGAGAAAACAAGGC TGACT ACCTTATTTTCTCACTCA CATTTCGAGGCAGCA metF 3917660 - 3916770 - | 5,10-methylenetetrahydrofolate reductase EFER_3822 3918010 - 3918984 + | hypothetical protein TERM 5123 3919142 - 3919154 + GT 70 -5.5 -4.31379 | TGCCGCTGCATCTGC GTCTG TAT CAGGC TTTTCGTCAGTTGGT TERM 5124 3920178 - 3920150 - gT 80 -10.3 -3.57144 | opp_overlap 3920143 3920139 3920148 TGCTTGATGGCGAAA CGCCTGCGTTA TCCCAAC TAACGCTGGCG CGATTTATCGAGTCC TERM 5125 3920386 - 3920370 - gT 72 -9.3 -3.19255 | GCAACAGACACTGAA CGTCGCG CGC CGCGCCG GGTTAAACATCGCCG TERM 5126 3920433 - 3920397 - gT 76 -10.9 -2.60496 | gap 1, overlap 3920396 3920394 CGCCGGGTTAAACAT CGCCGGAATGCGCCAG TTCTGG CTGACGCACCCCG-CG CCCGCGGGCTGGCTG EFER_3824 3921658 - 3920492 - | Alanine racemase 3 EFER_3823 3919036 - 3920547 + | putative GntR-family regulatory protein, with an aminotransferase domain TERM 5127 3920751 - 3920767 + gT 70 -9.4 -2.79183 | TTTCGCGGAACGCCA TCCGCG TAACC CGCGGA TATCGTGGCGATACG glyAB 3922899 - 3921598 - | Serine hydroxymethyltransferase 2 (Serine methylase 2) (SHMT 2) TERM 5128 3921807 - 3921820 + gH 86 -5.9 -5.07486 | ACGGCGGCTGCGGAT CGCCC GGCA GGGTG TTTTTATTGACCGTG TERM 5129 3922762 - 3922788 + gH 76 -10.1 -3.25282 | opp_overlap 3922761 3922764 ATTCTCCGAGGCAAT CAGTTCCAGCG ACTGC CGCTGGCGCTG TTGCTCCTGGTTAAT TERM 5130 3923113 - 3923125 + H 71 -9.1 -3.30124 | opp_overlap 3923103 3923099 AGAATGCTCAGGCCA TCGCC ATG GGCGA TTCTGGCAAGTAAAA EFER_3828 3923910 - 3924284 + | putative decarboxylase TERM 5131 3924344 - 3924309 - T 70 -9.8 -2.56124 | overlap 3924308 3924306 GCGATGCAAACACAT CTTATCCGGCCCAC GTTCTTCT ATGGGTCGGATAAG GCAGCCTCAATACGT EFER_3829 3925917 - 3924364 - | putative phosphoesterase TERM 5132 3927127 - 3927073 - g 100 -12.9 -4.14627 | opp_overlap 3927073, overlap 3927023 TGGCTACATAAACAA GCAGTATTTACTCACAGCACCCCGC TTTCC GCAGGGCGCGTTACGCAAATACTGC TTTCTCTGGCTCAGG EFER_3830 3926050 - 3927180 + | hypothetical protein metL 3929576 - 3927144 - | fused aspartokinase II ; homoserine dehydrogenase II TERM 5133 3928778 - 3928799 + g 83 -13 -3.10409 | opp_overlap 3928765 3928778, overlap 3928795 TACGCGCGTGCAACA CTGGCGCG GCAAGA CGCGCCAG TTCGCTGGCTTCATC TERM 5134 3928799 - 3928778 - G 83 -13 -3.01924 | opp_overlap 3928778 3928795, overlap 3928765 TACGCGCGTGCAACA CTGGCGCG GCAAGA CGCGCCAG TTCGCTGGCTTCATC metB 3930739 - 3929579 - | cystathionine gamma-synthase, PLP-dependent metJ 3931016 - 3931333 + | DNA-binding transcriptional repressor, S-adenosylmethionine-binding TERM 5135 3931345 - 3931367 + F 73 -2.6 -5.1675 | gap 1, opp_overlap 3931345 3931343 CTAAAGCGGAAAAGA GCGGCGCGG AGTTAA CCA-GCCGC TTTTTTCATACATGG TERM 5136 3931967 - 3931989 + G 70 -5.5 -4.32034 | CGCCACAACTCACCA CAGTCGCCA AAGAA TGGCCGCTG TTTTCCTGGTAATGG yiiX 3931393 - 3932001 + | putative peptidoglycan peptidase EFER_3835 3932005 - 3932631 + | conserved hypothetical protein; putative outer membrane lipoprotein TERM 5137 3932653 - 3932666 + T 100 -9.5 -5.02074 | opp_overlap 3932653 TCAGGCACAAAAAAA GCGCC GTGC GGCGC TTTTTTCGGAAATCC TERM 5138 3932666 - 3932653 - T 100 -9.5 -5.64274 | opp_overlap 3932653 TCAGGCACAAAAAAA GCGCC GTGC GGCGC TTTTTTCGGAAATCC rpmE 3932898 - 3932686 - | 50S ribosomal subunit protein L31 TERM 5139 3934805 - 3934818 + G 74 -8.1 -4.10453 | TTTTCTGCGGATTTT CGCTC GGCA GAGCG TTTTGCCCAACTTTA priA 3933101 - 3935299 + | Primosome factor n' (replication factor Y) cytR 3935455 - 3936480 + | DNA-binding transcriptional dual regulator TERM 5140 3936976 - 3936927 - g 83 -12.9 -3.04322 | gap 1, opp_overlap 3936926, overlap 3936917 3936947 GTTAACGCCTGAACA GCGGCAGCTACTGGAGCAAATGCA GGC TG-ATATGCGCCAGCAGCCGACGC AATTGGTTGAAGTTC TERM 5141 3937456 - 3937446 - g 86 -6.8 -4.96468 | TAAAGGGAAAGAAAA TGCC GAC GGCA CCCTGAATCGCCTGA ftsN 3936574 - 3937518 + | essential cell division protein TERM 5142 3937556 - 3937575 + F 100 -15 -3.84996 | TATAATTGCATTATG CCCCGCAC AATT GTGCGGGG TTTGAATTCTGTATT hslV 3937611 - 3938141 + | peptidase component of the HslUV protease hslU 3938151 - 3939482 + | molecular chaperone and ATPase component of HslUV protease TERM 5143 3939513 - 3939530 + F 100 -9.1 -5.06816 | opp_overlap 3939525, overlap 3939525 TTCATCATTGTTTGA TGGGGCT GAAA GGCCCCA TTTTTATTGGCGCGT menA 3939549 - 3940475 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase rraA 3940568 - 3941053 + | ribonuclease E (RNase E) inhibitor protein TERM 5144 3941076 - 3941061 - T 100 -10.4 -5.28176 | opp_overlap 3941061 TTGAGTGATAAAAAA GGCACC GCAA GGTGCC TTATACCGCAAAGTA TERM 5145 3941061 - 3941076 + T 78 -10.4 -3.28924 | opp_overlap 3941061 TTGAGTGATAAAAAA GGCACC GCAA GGTGCC TTATACCGCAAAGTA yiiU 3941360 - 3941115 - | hypothetical protein TERM 5146 3941234 - 3941250 + g 74 -2.9 -5.01858 | GCTGGGCATTTTGAA CTTCCTG CGA CAGTGAG TTGTTTTTTTCTTTC EFER_3845 3941608 - 3941450 - | hypothetical protein glpF 3941788 - 3942633 + | glycerol facilitator TERM 5147 3942795 - 3942771 - g 72 -8.7 -3.76492 | overlap 3942782 3942783 GCGAATTTGAGCAAA TCTACCCAA AACCGGG TTGGGTAGA ACACGACCCAATGGA TERM 5148 3943523 - 3943510 - g 72 -4.5 -4.61566 | overlap 3943503 3943502 3943511 GGTGAAATCAGAAAA CGGTC TGCT GACCA CCATCGCCTGTGGCC TERM 5149 3943682 - 3943672 - g 72 -6.8 -4.25074 | opp_overlap 3943672, overlap 3943664 CACCAAAGTGCAAAA CACC AAC GGTG TGTATGTGGTTCCGG TERM 5150 3944136 - 3944123 - g 74 -3.1 -5.00616 | gap 1, overlap 3944132 GCTGGCTGGAAAAAA GCG-GT TAA ACGCGC GATGGCGTGGGAAGA glpK 3942656 - 3944164 + | glycerol kinase TERM 5151 3944212 - 3944189 - f 82 -10.2 -3.59262 | overlap 3944190 GTCCATAGCCTGAAA TCGTGCGGGG GCAA CCCCGCACAC ATCAATAATCCAGCC TERM 5152 3944211 - 3944190 - f 93 -13.7 -2.75343 | overlap 3944189 TCCATAGCCTGAAAT CGTGCGGGG GCAA CCCCGCACA CATCAATAATCCAGC TERM 5153 3944384 - 3944366 - g 95 -9.5 -4.83169 | opp_overlap 3944376 3944377 ACGCGGCGATAAAAA CACCGCG GACGG CGCGGCG GTTAACGCCATGCGT glpX 3944277 - 3945287 + | fructose 1,6-bisphosphatase II TERM 5154 3945308 - 3945329 + F 100 -13.1 -5.7946 | TTGATCGATTGAGCC TTCCAGTCC TTCG GGACTGGAA TTTTTTTGTTCGGAG fpr 3945384 - 3946130 + | ferredoxin-NADP reductase yiiT 3946563 - 3946135 - | stress-induced protein TERM 5155 3946303 - 3946314 + g 72 -4.4 -4.66537 | CGGCATCTCACCCTG CTCA ATTC TGAG TTTTGTCTTAGGCCA EFER_3851 3946965 - 3946591 - | hypothetical protein yiiR 3947539 - 3947099 - | conserved hypothetical protein; putative inner membrane protein TERM 5156 3947700 - 3947686 - g 72 -10 -3.40403 | TTTTCTCCACCATAA CCGCAA GCG TTGCGG CACTGGCGGATACGC yiiQ 3947640 - 3948239 + | hypothetical protein tpiA 3948347 - 3949114 + | triosephosphate isomerase TERM 5157 3949124 - 3949146 + T 100 -16.4 -3.14468 | opp_overlap 3949108 3949124 GCTTAAGCCTGACAA GTGCCGGATA TCA TATCCGGCAC TTAACTCTCCTCAAC TERM 5158 3949146 - 3949124 - T 100 -16.4 -3.33261 | opp_overlap 3949124, overlap 3949108 GCTTAAGCCTGACAA GTGCCGGATA TCA TATCCGGCAC TTAACTCTCCTCAAC cdh 3949961 - 3949170 - | CDP-diacylglycerol phosphotidylhydrolase TERM 5159 3950002 - 3949981 - R 100 -8 -5.63517 | gap 1, opp_overlap 3949981 3949980 GTGTCAAATAAAAAA CCCGGT-GC ACAGG GCTACCGGG CTTTGGTCTTTTCAG sbp 3951012 - 3950023 - | sulfate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5160 3951131 - 3951148 + r 79 -8.4 -4.18018 | opp_overlap 3951131 AGAGCTATTAAAAAA GGCGGA ATAAAA TCCGCC TTTTCCATGCCAAAA TERM 5161 3951148 - 3951131 - R 100 -8.4 -5.17353 | opp_overlap 3951131 AGAGCTATTAAAAAA GGCGGA ATAAAA TCCGCC TTTTCCATGCCAAAA pfkA 3952131 - 3951169 - | 6-phosphofructokinase I TERM 5162 3951843 - 3951855 + g 77 -3.3 -5.15117 | CGATAACAACCAGCG CGTCG ATA CCACG TTTTTTCAGGTTTTC fieF 3953214 - 3952312 - | zinc transporter TERM 5163 3953178 - 3953142 - G 90 -14.6 -2.79809 | gap 1, opp_overlap 3953146, overlap 3953134 3953133 3953146 3953156 CAAAAATTTTAATCA GCAATAGCAGCGA-AGC CATC GCTGTCGCAGCTATTGC TGCCCGACTGACTAG TERM 5164 3953323 - 3953305 - R 100 -14.6 -6.11644 | GGAGTCAAAAAAAAA CCCCCACA TCA TGTGGGGG AAGACAGGGATGGTG cpxP 3953864 - 3953364 - | periplasmic protein combats stress cpxR 3954015 - 3954713 + | DNA-binding response regulator in two-component regulatory system with CpxA TERM 5165 3955426 - 3955436 + G 70 -6.8 -4.05389 | overlap 3955399 CATGATGACCTCTCA GCAG CGT CTGC TTTCTGATATCTCTC TERM 5166 3955627 - 3955612 - g 79 -4.6 -4.94902 | overlap 3955614 TAATCAGCAGAAAAA CGCGCT GGTG AGCGAG ACATTGAAAGCTAAC cpxA 3954710 - 3956083 + | sensory histidine kinase in two-component regulatory system with CpxR TERM 5167 3956101 - 3956138 + T 78 -9.7 -3.41798 | opp_overlap 3956114, overlap 3956099 3956104 3956132 GCGCAGGGCAGCTTT TGTAGCCGGATAAGGCG TTTA CGCCGCATCCGGCATCA TGTCTTATTTTCCCC TERM 5168 3956104 - 3956135 + T 72 -10 -2.85017 | opp_overlap 3956114, overlap 3956101 3956099 3956132 CAGGGCAGCTTTTGT AGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TCATGTCTTATTTTC yiiM 3956817 - 3956143 - | hypothetical protein TERM 5169 3956863 - 3956846 - R 100 -9.1 -5.4251 | opp_overlap 3956846 3956861 CGCAGATACAAAAAA GCGAGCC ATCA GACTCGC TTCTCACAGGCGTTT sodA 3957507 - 3956887 - | superoxide dismutase, Mn TERM 5170 3957136 - 3957150 + g 75 -5.6 -4.6902 | opp_overlap 3957136 CCAGCCGGAACCAAA GCGGGA AGC TGCCGC TTTTTCAAATTCTGC rhaT 3957794 - 3958828 + | L-rhamnose:proton symporter TERM 5171 3958841 - 3958874 + T 80 -10.3 -3.55761 | opp_overlap 3958850 TAAACTTTTTGCGCA CTGAGATGACGCC ACTGGCTG GGCGTCATCCCGG TTTCGCGAGTAAATA rhaR 3959712 - 3958825 - | DNA-binding transcriptional activator, L-rhamnose-binding TERM 5172 3959495 - 3959483 - G 76 -4.1 -4.88163 | TGAATATAAAACAAA TCACC ACG GGTAA TGCGGTAAGGCCGAC rhaS 3960581 - 3959745 - | HTH-type transcriptional activator RhaS (L-rhamnose operon regulatory protein rhaS) TERM 5173 3960425 - 3960394 - G 72 -4.4 -4.64676 | gap 1, opp_overlap 3960394, overlap 3960398 CTATCGCGAATAAAA CAGACC-ATACCGCC ACT GATGGTATAGGGCTG TCCGTTCAACACATG rhaB 3960870 - 3962339 + | rhamnulokinase rhaA 3962336 - 3963595 + | L-rhamnose isomerase TERM 5174 3963631 - 3963600 - f 71 -10 -2.60615 | opp_overlap 3963610, overlap 3963599 3963597 AGCGTGGGTAAACAC TGCCGGATGCGGCG CAAG CGCCTTATCCGGCC TACGGGTCGTGCATC rhaD 3963678 - 3964502 + | rhamnulose-1-phosphate aldolase EFER_3870 3964526 - 3965722 + | alcohol dehydrogenase in rhamnose degradation pathway yiiL 3965719 - 3966033 + | L-rhamnose mutarotase TERM 5175 3966039 - 3966068 + F 100 -11.5 -5.01042 | overlap 3966042 TCTGCCGTAATTGCC TAATGTGCCGGAG ACGC CTTCGGCACAATA TTTTTAATTTCGATT TERM 5176 3966042 - 3966065 + F 95 -13.2 -3.05798 | overlap 3966039 GCCGTAATTGCCTAA TGTGCCGGAG ACGC CTTCGGCACA ATATTTTTAATTTCG TERM 5177 3966172 - 3966156 - f 78 -2.3 -5.42265 | GTAAATCATAAAAAA TAATGAA TAA CCCATTA ATGATTCATATGGTT frvA 3966335 - 3966781 + | enzyme IIA component of PTS TERM 5178 3967204 - 3967214 + G 74 -8.2 -3.97947 | overlap 3967167 3967206 TGGCGGGCGTCTCTG CGGC GCT GCCG TTTGTCATCGGTGGC frvB 3966792 - 3968243 + | fused putative PTS enzymes: IIB component ; IIC component TERM 5179 3968334 - 3968316 - g 81 -10.2 -3.88787 | CGACATTCTGATAAA CACGCTGG AAC CCTGCGTG AATGAGATCACCTTC frvX 3968233 - 3969303 + | putative endo-1,4-beta-glucanase TERM 5180 3969476 - 3969447 - g 85 -11.4 -3.66356 | ACCCTTAACGGCAAA GCCCGCATTTCC GCCAGT GGCAACGCGGGC TATCAGCTGGAAATC TERM 5181 3969651 - 3969667 + G 71 -2.1 -4.99035 | opp_overlap 3969632 3969651 3969653, overlap 3969653 CTGCCCCGCCTGAAA CAGCGCT ATG AACGCGG TTTTTGTCTCGCTAG TERM 5182 3969742 - 3969764 + G 75 -4.9 -4.87291 | GCATTATTTTGCTGG CGAATCTTT TACGC AAAGATCCG TTTTTAATTCCGCTG TERM 5183 3970216 - 3970226 + G 72 -8.2 -3.85539 | opp_overlap 3970203 3970209, overlap 3970209 ACCTGAAAGCCGCCT GGCC TGC GGCC TTTGATATGAGTCTG TERM 5184 3970639 - 3970651 + G 71 -3.3 -4.77757 | overlap 3970638 CGGAGCGTTTTTTCT CTGCC CCC GGAAG TTTTCATTTTTCGAA frvR 3969303 - 3971051 + | putative regulator TERM 5185 3971126 - 3971112 - f 72 -9.2 -3.12999 | TCACCGGATATTCAA CCGGCG GAA CGCCAG GCGAAACTATCTTCA TERM 5186 3976276 - 3976257 - g 74 -6.3 -4.56597 | overlap 3976259 GCCGGTCGTCAAAAA CTCCGCG ATCCAA CGCGGTG AGGCAGCAACTTACA EFER_3876 3971167 - 3977481 + | intimin TERM 5187 3977580 - 3977555 - T 100 -17.7 -4.31085 | opp_overlap 3977552 3977551 CACAGTAATTTAAAA GGTTAAGCCGC ATAC GCGGCTTAACC AACATTCTATCTCTC TERM 5188 3978788 - 3978757 - T 70 -8.1 -3.62046 | opp_overlap 3978756, overlap 3978734 TCATGGCCCGAATAA TTCCTGCGACATA AAAATA TAAATCGCAGGAA GCTATTTTAATTACC EFER_3879 3981144 - 3978838 - | conserved hypothetical protein; TPR repeat TERM 5189 3979601 - 3979611 + g 86 -6.8 -4.91109 | TCCAGCTTTCGATCC CAGG CTT CCTG TTTTTGTGCTGCCCA TERM 5190 3981014 - 3981024 + g 79 -2.4 -5.24799 | TTCATTTCCGGCAAT AGCG AAT CGCA TTTTTCTATTTGTAG htpG 3982981 - 3981146 - | Hsp90xo molecular chaperone TERM 5191 3981752 - 3981741 - G 70 -7.2 -4.09511 | overlap 3981742 AACATCTCTTCAAAA CCGC CGTC GCGG CTTAACAGAATATGA TERM 5192 3982154 - 3982130 - G 70 -3.6 -4.59109 | CATACCGCGCAAAAA CAGCGACA GGTTGCGGT TATCGCTG GTGCCGTAGGTTGCG TERM 5193 3983258 - 3983286 + r 75 -5.9 -4.59982 | opp_overlap 3983260, overlap 3983260 TTAATAGAAAAATAA AACCGCAATCCAG AAT CAGAATTGCGGTA TTTCTTTAATTATGA TERM 5194 3983260 - 3983284 + r 75 -8.5 -3.89787 | opp_overlap 3983260, overlap 3983258 AATAGAAAAATAAAA CCGCAATCCAG AAT CAGAATTGCGG TATTTCTTTAATTAT TERM 5195 3983284 - 3983260 - R 100 -10.7 -5.40873 | opp_overlap 3983260 3983258 AATAGAAAAATAAAA CCGCAATCCAG AAT CAGAATTGCGG TATTTCTTTAATTAT fdhD 3984128 - 3983292 - | formate dehydrogenase formation protein TERM 5196 3984081 - 3984096 + g 79 -4 -5.1517 | overlap 3984070 AATTTGACGAACACC TGTGAT ATTT GTCACA TTTTTGATTTCTTTT TERM 5197 3984778 - 3984768 - g 77 -8.2 -4.10657 | CTACATTGCGCAAAA CGCC GAA GGCG TGACTGTTAACCGCT TERM 5198 3985349 - 3985327 - g 74 -7.7 -4.02022 | CGCAAGTACGATAAA TCCAGCTGG ACCTA CGAGCTGGA CGAAAACGGCTTCGC TERM 5199 3986438 - 3986458 + G 72 -10.3 -3.40403 | opp_overlap 3986438 CGCTGGCCGATATTA CCGATCCGG CAA CCGGGGCGG TTATCGTCAAGAAAG fdoG 3984322 - 3987372 + | formate dehydrogenase-O, large subunit TERM 5200 3987595 - 3987570 - g 85 -11.3 -3.61715 | gap 1, opp_overlap 3987569 3987570 3987572 TACCGTCGGCAATAA CATTGGGG-TGT ACG ACAACCCCAATG ATTTAAGCGCCAAAT TERM 5201 3987570 - 3987595 + G 73 -11.3 -2.71791 | gap 1, opp_overlap 3987570, overlap 3987569 3987572 TACCGTCGGCAATAA CATTGGGG-TGT ACG ACAACCCCAATG ATTTAAGCGCCAAAT TERM 5202 3987976 - 3987965 - g 70 -5.8 -4.28018 | overlap 3987966 AAGAGTCGATGAAAA CGCT GGCG AGCG AGCGCGTGGCGGAGT fdoH 3987385 - 3988287 + | formate dehydrogenase-O, Fe-S subunit fdoI 3988284 - 3988919 + | formate dehydrogenase-O, cytochrome b556 subunit TERM 5203 3988968 - 3988987 + G 86 -10.7 -3.97307 | opp_overlap 3988965 3988968 CGAGCGAGAAACGTA CGGCGGA TATGAT TCCGCCG TTATTGTTCCCTCGG TERM 5204 3988987 - 3988968 - g 70 -10.7 -2.71325 | opp_overlap 3988968, overlap 3988965 CGAGCGAGAAACGTA CGGCGGA TATGAT TCCGCCG TTATTGTTCCCTCGG fdhE 3988916 - 3989845 + | formate dehydrogenase formation protein yiiE 3990438 - 3990190 - | putative transcriptional regulator TERM 5205 3990818 - 3990790 - R 80 -11.7 -2.62463 | opp_overlap 3990791, overlap 3990789 3990776 3990775 3990793 TCTACCATCCATAAC TGACCGGTCAGTG CCG CACCAACCGGTCT TTAATTGTTAGTAGT TERM 5206 3990791 - 3990817 + r 93 -10.8 -4.09805 | opp_overlap 3990790 3990789 3990776 3990775 3990793 CTACCATCCATAACT GACCGGTCAGTG CCG CACCAACCGGTC TTTAATTGTTAGTAG TERM 5207 3990815 - 3990793 - R 83 -12 -2.60808 | opp_overlap 3990791, overlap 3990790 3990789 3990776 3990775 ACCATCCATAACTGA CCGGTCAGTG CCG CACCAACCGG TCTTTAATTGTTAGT EFER_3888 3991104 - 3990826 - | hypothetical protein TERM 5208 3991295 - 3991326 + r 85 -2.2 -5.86061 | gap 1, opp_overlap 3991320, overlap 3991303 TGATGCTTTTTTGCT TCCGTCGCCTGCTGT GCG ATAAC-GACGGCGGA TTTTTTTTAATCGCG TERM 5209 3991397 - 3991411 + r 95 -11.4 -3.75015 | opp_overlap 3991387 3991386 3991384 AATACTCCTGAGCAG GCGGCA CTA TGCCGC TTTCATAGGAATTCT yiiD 3992536 - 3991547 - | putative acetyltransferase dtd 3992970 - 3992533 - | D-tyr-tRNA(Tyr) deacylase rbn 3993839 - 3992967 - | conserved hypothetical protein; putative inner membrane protein TERM 5210 3993782 - 3993815 + g 81 -6 -4.75372 | gap 1 GCCAGAGTAGTTTCA GCCAGGC-CCATAGC GGACG GGTATGATGCCTGGC TTTTTCATGGATGGT yihX 3994432 - 3993833 - | putative hydrolase EFER_3895 3994785 - 3995630 + | hypothetical protein TERM 5211 3995673 - 3995632 - g 70 -5.9 -4.20516 | opp_overlap 3995642, overlap 3995628 3995637 3995638 3995641 TGTTTACCGAATAAA TGAAATTTATTGGGAGAGA GTCA TCTCTCCCATTATTTATCA CAGAAAAGGAATTCT TERM 5212 3995642 - 3995663 + G 100 -13.1 -4.06419 | opp_overlap 3995641 3995638 3995637 3995632 ATAAATGAAATTTAT TGGGAGAGA GTCA TCTCTCCCA TTATTTATCACAGAA EFER_3896 3995631 - 3996677 + | hypothetical protein TERM 5213 3996907 - 3996918 + G 72 -4.4 -4.70046 | opp_overlap 3996874 3996873, overlap 3996874 TTTACCTGGCCTTCG CATC ATTC GATG TTTTCTGGTTTTATG EFER_3897 3996670 - 3997542 + | putative metal-dependent hydrolase TERM 5214 3998443 - 3998463 + G 90 -9.7 -4.36914 | overlap 3998444 GCAAAACCAGCCCGC ATCGCGACA AAT TGTCGCGAA TTTTATCGCCCGGCC TERM 5215 3998444 - 3998462 + G 85 -13.2 -3.21934 | overlap 3998443 CAAAACCAGCCCGCA TCGCGACA AAT TGTCGCGA ATTTTATCGCCCGGC EFER_3898 3997523 - 3998773 + | putative coproporphyrinogen III oxidase and related FeS oxidoreductase EFER_3899 3998770 - 3999627 + | hypothetical protein TERM 5216 3999845 - 3999876 + G 77 -11.6 -3.25823 | CTATCTTTATCATCC GCGCCAGCGG CAAATATTGCGT CCGCTGGCGC TTGATATCCACAAGG EFER_3900 3999624 - 4000319 + | putative phosphatase TERM 5217 4000386 - 4000369 - T 100 -11.3 -5.50313 | opp_overlap 4000369 TACAAAAGCAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTATGACTAAA TERM 5218 4000369 - 4000386 + T 100 -11.3 -5.28176 | opp_overlap 4000369 TACAAAAGCAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTATGACTAAA bipA 4002233 - 4000410 - | GTP-binding protein TERM 5219 4002386 - 4002400 + G 74 -10 -3.481 | opp_overlap 4002379 4002380 4002393, overlap 4002382 4002393 TATCCAAAGGTCATT GCACCA ATA TGGTGC TTAATGTTTCCATTG EFER_3902 4002326 - 4002478 + | hypothetical protein TERM 5220 4003393 - 4003383 - g 70 -6.8 -4.13945 | ACCTTTATGCCAAAA CCGA TGT TCGG TGATAACGGCTCTGG glnA 4002606 - 4004015 + | glutamine synthetase TERM 5221 4004032 - 4004053 + F 77 -8.6 -3.91911 | overlap 4004033 AGTTGAAGTTGTACT ACCCGGCG CAACAA CGCCGGGA TTTAGTTGCCGTGGA TERM 5222 4004033 - 4004052 + F 86 -12.1 -2.94825 | overlap 4004032 GTTGAAGTTGTACTA CCCGGCG CAACAA CGCCGGG ATTTAGTTGCCGTGG TERM 5223 4004077 - 4004094 + F 89 -7 -5.28176 | CCGTGGAAACTTTCA GCCCAT CTCTGC ATGGGC TTTTTTCTCCGTCAA TERM 5224 4004629 - 4004617 - g 75 -4.7 -4.82667 | opp_overlap 4004618, overlap 4004618 GCATGAGATTAAAAA TCCGC TTG GCGGT TTACGTGGTGCGGCG glnL 4004189 - 4005238 + | sensory histidine kinase in two-component regulatory system with GlnG glnG 4005250 - 4006659 + | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator ; sigma54 interaction protein TERM 5225 4006911 - 4006884 - T 93 -11.2 -4.18018 | opp_overlap 4006892 GCTGTTTAGCTAAAA CCGGATGCGGCG TGAA CGCCTTATCCGG CCTGTAAATCGTGCA TERM 5226 4006981 - 4007004 + T 100 -16.8 -3.39449 | overlap 4006984 GTGGCGCATCAGCTT CAAGGGCTGG GATT CCAGCCCTTG TTCGTGTTAATCCCA TERM 5227 4006984 - 4007001 + T 100 -12.7 -3.83155 | overlap 4006981 GCGCATCAGCTTCAA GGGCTGG GATT CCAGCCC TTGTTCGTGTTAATC tdh 4008036 - 4007011 - | threonine 3-dehydrogenase, NAD(P)-binding kbl 4009914 - 4008046 - | 2-amino-3-ketobutyrate coenzyme A ligase (AKB ligase) (Glycine acetyltransferase) TERM 5228 4009349 - 4009331 - GH 71 -2.4 -5.02074 | GTACTTGTCAAAAAA TAAGCATA AAT CACGCTCA GGCATACCACTTTCG TERM 5229 4009877 - 4009861 - Gg 75 -4.3 -4.87626 | opp_overlap 4009861 4009852, overlap 4009854 CGTGAATACGAAAAA CCGCTGA ACG TCTACGG TTATTCGAAGTTCCT waaD 4009456 - 4010388 + | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding TERM 5230 4010499 - 4010526 + G 84 -10.6 -3.7941 | gap 1, opp_overlap 4010499 CCAGGCGATAATCGA CGTGATGGCACCG GCA TGGTGCCGTC-CG TTATTATCGCGGATG waaF 4010398 - 4011444 + | ADP-heptose:LPS heptosyltransferase II waaC 4011448 - 4012404 + | ADP-heptose:LPS heptosyl transferase I rfaL 4012443 - 4013660 + | O-antigen ligase TERM 5231 4013666 - 4013693 + T 100 -13.6 -3.06162 | gap 1, opp_overlap 4013666 GAATAAATAAAAAAA GCCTGCCTGACAT TAA AT-TCAGGCAGGC TCTTCAAATCCAATA TERM 5232 4013693 - 4013666 - T 100 -13.6 -6.08342 | gap 1, opp_overlap 4013666 GAATAAATAAAAAAA GCCTGCCTGACAT TAA AT-TCAGGCAGGC TCTTCAAATCCAATA rfaK 4014855 - 4013713 - | Lipopolysaccharide 1, 2-N-acetylglucosaminetransferase waaZ 4015717 - 4014908 - | lipopolysaccharide core biosynthesis protein waaY 4016487 - 4015789 - | lipopolysaccharide core biosynthesis protein TERM 5233 4016210 - 4016238 + g 74 -11.2 -3.24188 | gap 1 TGTAGCCCCTCGTTA CGCACTTTTTGAG TTTG CTCAAAAAG-GCG TTCATAATAATCTCC waaJ 4017521 - 4016505 - | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase waaI 4018580 - 4017561 - | UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase TERM 5234 4017909 - 4017934 + g 100 -9.9 -5.73672 | opp_overlap 4017912 4017914 TGCCAGCAACATATT TAATACATCCT GATC AGGATGTGTTA TTTTTTTGATTATTT TERM 5235 4018238 - 4018224 - G 77 -2.8 -5.14563 | TGCTTTATTAAAAAA GTAATC TGC GATAAC AAAACGAAAATAAAT TERM 5236 4018405 - 4018394 - G 71 -3 -4.83593 | AATAATCAGTAAAAA TATG AAAG CATA ATCGATTTCCTTCAT TERM 5237 4018875 - 4018894 + H 80 -3.6 -5.27399 | CCTTCAAAAGATGAC GTGAGT AATAATGC ACTCAC TTTTTTAATATCTTG TERM 5238 4018978 - 4018993 + H 71 -4.7 -4.59773 | CAATATTTAATTCTC TGCCA TAAGCC TGGCA TTTTTCGAAATCGGA TERM 5239 4019614 - 4019634 + G 100 -12.5 -4.34223 | overlap 4019615 CGCGTATTCAGGCTG ACCCTGCGC GCT GCGCAGGGC TTTATTGATTCCATT TERM 5240 4019615 - 4019633 + G 100 -16 -3.1945 | overlap 4019614 GCGTATTCAGGCTGA CCCTGCGC GCT GCGCAGGG CTTTATTGATTCCAT EFER_3918 4019365 - 4020333 + | transposase, IS903.B TERM 5241 4020352 - 4020342 - T 77 -8.2 -3.95435 | overlap 4020343 TGCCTGAAAACACAA CCCG CTA CGGG GGAGACTTACCCGAA EFER_3920 4021851 - 4020907 - | UDP-glucose:glucosyl LPS a 1, 2-glucosyltransferase waaP 4022661 - 4021864 - | kinase that phosphorylates core heptose of lipopolysaccharide waaG 4023778 - 4022654 - | glucosyltransferase I waaQ 4024809 - 4023775 - | lipopolysaccharide core biosynthesis protein TERM 5242 4023893 - 4023905 + g 90 -9.1 -4.51097 | TTGCGGTCAAGTTCG TGCCG GGT CGGCA TTTTCTGATAATTCC TERM 5243 4024093 - 4024119 + g 81 -5.8 -4.86731 | overlap 4024094 4024097 CAGTTCAGGAAAACG TGTTTTACCGGC AAG GCCGGTAATAGG TTTTGTTTGGCAGCC TERM 5244 4024097 - 4024115 + g 82 -13.2 -2.88887 | overlap 4024094 4024093 TCAGGAAAACGTGTT TTACCGGC AAG GCCGGTAA TAGGTTTTGTTTGGC TERM 5245 4025872 - 4025847 - g 77 -6.1 -4.61482 | GGGTGCAAAAAATAA TCAGGTGACCA TCAC TGGTAGCCTGA AATTCGATATCTCTG TERM 5246 4026398 - 4026388 - g 70 -6.8 -4.08945 | opp_overlap 4026388 ACTACGCTTGCAAAA GAGG TTT CCTC TTTACTCACCGACGC kdtA 4025251 - 4026528 + | 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) coaD 4026536 - 4027015 + | pantetheine-phosphate adenylyltransferase mutM 4027863 - 4027054 - | formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase TERM 5247 4027946 - 4027911 - R 100 -16.4 -2.90194 | opp_overlap 4027914 4027921, overlap 4027914 4027921 ATGGGGGCAAGCAGA TAACAAAAAACCCCGC CGGA GCGAGGTTTTTCGTTA CATCAAAGCGAGAAT TERM 5248 4027943 - 4027914 - R 100 -13.7 -3.59946 | opp_overlap 4027914 4027921, overlap 4027911 4027921 GGGGCAAGCAGATAA CAAAAAACCCCGC CGGA GCGAGGTTTTTCG TTACATCAAAGCGAG TERM 5249 4027914 - 4027943 + r 71 -9.3 -3.05384 | opp_overlap 4027914 4027911 4027921, overlap 4027921 GGGGCAAGCAGATAA CAAAAAACCCCGC CGGA GCGAGGTTTTTCG TTACATCAAAGCGAG TERM 5250 4027936 - 4027921 - R 100 -8.2 -5.60689 | opp_overlap 4027914 4027921, overlap 4027914 4027911 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTTTCGTTACATCA TERM 5251 4027921 - 4027936 + r 78 -6 -4.88407 | opp_overlap 4027921 4027914 4027911, overlap 4027914 GCAGATAACAAAAAA CCCCGC CGGA GCGAGG TTTTTCGTTACATCA rpmG 4028128 - 4027961 - | 50S ribosomal subunit protein L33 TERM 5252 4028005 - 4028029 + g 70 -3.6 -4.62872 | gap 1, opp_overlap 4028005 CGTGCTGGCGAACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGCTTAGT rpmB 4028385 - 4028149 - | 50S ribosomal subunit protein L28 TERM 5253 4028589 - 4028576 - R 71 -6.7 -4.2074 | overlap 4028579 TCCCGAACAGACAAA GATCC CGAA GGATC GCGCATAGCGGGTTA yicR 4029270 - 4028602 - | protein associated with replication fork, putative DNA repair protein dfp 4029442 - 4030662 + | fused 4'-phosphopantothenoylcysteine decarboxylase ; phosphopantothenoylcysteine synthetase, FMN-binding dut 4030643 - 4031098 + | deoxyuridinetriphosphatase TERM 5254 4031151 - 4031131 - f 81 -11.9 -2.50817 | overlap 4031130 4031128 4031126 AACGTCATAACATAG CCGCAAACA TTT CGTTTGCGG TCATAGCGTGGGTGC TERM 5255 4031674 - 4031696 + G 72 -6.3 -4.39426 | overlap 4031683 CCACCGATGAAACAC TGCTGGCAA GCCAG TTGCTGGCA TTTTGTGAAGGTATG ttk 4031205 - 4031801 + | division inhibitor TERM 5256 4031811 - 4031839 + T 91 -8.2 -4.65916 | gap 1, opp_overlap 4031812 4031826, overlap 4031812 CAGTAATTCTCCCAA ACGTTCAGGCAGA AACG TCTGCCTG-ACGC TTTTCTTACCATACC TERM 5257 4031812 - 4031838 + T 86 -11.7 -3.39068 | gap 1, opp_overlap 4031812 4031826, overlap 4031811 AGTAATTCTCCCAAA CGTTCAGGCAGA AACG TCTGCCTG-ACG CTTTTCTTACCATAC TERM 5258 4031838 - 4031812 - T 89 -11.7 -3.55801 | gap 1, opp_overlap 4031812 4031811, overlap 4031826 AGTAATTCTCCCAAA CGTTCAGGCAGA AACG TCTGCCTG-ACG CTTTTCTTACCATAC EFER_3933 4032816 - 4031845 - | Putative retron-type reverse transcriptase TERM 5259 4032719 - 4032731 + g 74 -6.3 -4.55295 | TGATTACTGAGCGCA TACAG CCG CTGTA TTTCTTTATCGGCGC TERM 5260 4032905 - 4032919 + r 73 -10 -3.06796 | overlap 4032891 GCGCGTCAGCGCGAC GTACGC GAA GCGTAC TTAAGTACAATGAAG pyrE 4033743 - 4033102 - | orotate phosphoribosyltransferase TERM 5261 4033801 - 4033784 - R 100 -11.3 -6.06529 | TACAGACAAAAAAAA GGCGACT CATC AGTCGCC TTAAAAATCAGTTTG rph 4034549 - 4033809 - | ribonuclease PH yicC 4034652 - 4035515 + | hypothetical protein yicG 4035766 - 4036383 + | conserved hypothetical protein; putative inner membrane protein TERM 5262 4037234 - 4037249 + F 70 -2.5 -5.07652 | GTACCACCACACCAT CTGTC ACGAAG GGCAG TTTTGTTTTCCACCA TERM 5263 4037731 - 4037742 + F 74 -4.4 -4.9725 | CGTGCACGCATCCAT TGCT GAAG AGCA TTTTTATCTGCCAGT TERM 5264 4038376 - 4038388 + G 82 -9.1 -4.15044 | opp_overlap 4038372 4038376 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA gmk 4038321 - 4038944 + | guanylate kinase rpoZ 4038999 - 4039274 + | RNA polymerase, omega subunit TERM 5265 4039849 - 4039831 - g 70 -5.2 -4.371 | opp_overlap 4039831, overlap 4039825 TCCACCACATTAAAA CCGAACTC GAA GAGCTGGG TTTTGAAGCGCTGTA spoT 4039293 - 4041401 + | bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase trmH 4041408 - 4042097 + | tRNA (Guanosine-2'-O-)-methyltransferase recG 4042103 - 4044184 + | ATP-dependent DNA helicase EFER_3945 4045035 - 4044169 - | hypothetical protein gltS 4046243 - 4045038 - | glutamate transporter TERM 5266 4045907 - 4045917 + g 72 -6.8 -4.18197 | opp_overlap 4045907 GGCTAGCCATACCAA TGCC AAT GGCA TTTTGCATCACCAAT TERM 5267 4046520 - 4046503 - g 90 -9.9 -4.42386 | CCTCGAGTCAGAAAA TGCGCAA CCGA TTGCGCA GACTCAAAGCAGCGA TERM 5268 4046738 - 4046762 + G 83 -12.8 -3.41962 | opp_overlap 4046737 4046738, overlap 4046736 ATTATTCAAATTAAG GCCTGGGGCC CGGTT GGCTCCGGGC TGTTGTCTATTCAGG yicE 4046474 - 4047865 + | putative transporter yicH 4047987 - 4049696 + | hypothetical protein TERM 5269 4049742 - 4049700 - T 73 -5.4 -4.72272 | opp_overlap 4049707 4049708, overlap 4049704 4049705 CCGGTGCAGTAAAAA TCAATCTCGCCGGGTACGAC TCA GACGTACCCGGCATTCTTCA ATAGATTACAACGTA TERM 5270 4049737 - 4049705 - T 72 -9.7 -2.90218 | opp_overlap 4049707 4049708, overlap 4049704 4049700 GCAGTAAAAATCAAT CTCGCCGGGTACGAC TCA GACGTACCCGGCATT CTTCAATAGATTACA TERM 5271 4049707 - 4049735 + T 100 -14.5 -3.69283 | opp_overlap 4049705 4049704 4049700, overlap 4049708 AGTAAAAATCAATCT CGCCGGGTACGAC TCA GACGTACCCGGCA TTCTTCAATAGATTA TERM 5272 4049708 - 4049734 + T 100 -18 -2.81088 | opp_overlap 4049705 4049704 4049700, overlap 4049707 GTAAAAATCAATCTC GCCGGGTACGAC TCA GACGTACCCGGC ATTCTTCAATAGATT yicI 4052066 - 4049748 - | putative alpha-glucosidase yicJ 4053458 - 4052076 - | putative transporter TERM 5273 4052260 - 4052273 + g 78 -5.2 -4.83615 | ATGATGCTAATCGTG GCGC TGTTCT GCGC TTTTTCTGCCGCATC TERM 5274 4054133 - 4054104 - g 70 -5.9 -4.28361 | gap 1, overlap 4054109 TGAACTTGACCAAAA CGCAACCTGTAAGT CTT ACTTACAAGTT-CA ACAGGAAGGTAACCG EFER_3951 4053769 - 4054935 + | conserved hypothetical protein, putative RhuM-like cytoplasmic protein EFER_3952 4055128 - 4055625 + | hypothetical protein TERM 5275 4056108 - 4056096 - g 91 -10.5 -4.15066 | opp_overlap 4056097 TATTGAGAAATCAAA CGCGG CCA CCGCG ACAGTGCTGCAATTT TERM 5276 4056445 - 4056462 + G 74 -2 -5.05601 | gap 1, opp_overlap 4056424, overlap 4056445 CACTTTATGGTGAAT GGC-AGT TTGAT ACTGGCC TTTTTCTATCTGGTG yicL 4055749 - 4056705 + | conserved hypothetical protein; putative inner membrane protein yicS 4056819 - 4057112 + | hypothetical protein EFER_3955 4058141 - 4057149 - | putative LacI-family transcriptional regulator; aminotransferase family EFER_3956 4058388 - 4058711 + | putative PTS subunit cellobiose/Chitosan phosphotransferase enzyme IIB component TERM 5277 4059428 - 4059441 + G 72 -5.3 -4.5442 | AATTCTGCTGTCTGT TCTGA TGTG TCAGA TTTTCTGGTTCGCAG EFER_3957 4058724 - 4060055 + | putative PTS subunit, cellobiose/chitosan-specific IIC component EFER_3958 4060055 - 4061473 + | putative glycosyl phosphatase EFER_3959 4061455 - 4061772 + | putative chitobiose/cellobiose phosphotransferase enzyme IIA component TERM 5278 4061895 - 4061840 - f 77 -3.7 -5.09259 | gap 3, opp_overlap 4061848 4061849 4061851, overlap 4061848 4061849 TACCCGAAAATAAAA TAGATAAACCACCCTGTTTCGG-TAGTT AAA AACAAACCGAAACAGGCTG-CTTAT-TA TCATAAAACAAATTA TERM 5279 4061848 - 4061889 + F 72 -8.1 -3.84406 | gap 1, opp_overlap 4061848 4061840 4061849, overlap 4061849 4061851 AATAAAATAGATAAA CCACCCTGTTTCGG-TAGTT AAA AACAAACCGAAACAGGCTGC TTATTATCATAAAAC TERM 5280 4061889 - 4061848 - f 79 -8.1 -4.37721 | gap 1, opp_overlap 4061848 4061849 4061851, overlap 4061840 4061849 AATAAAATAGATAAA CCACCCTGTTTCGG-TAGTT AAA AACAAACCGAAACAGGCTGC TTATTATCATAAAAC TERM 5281 4061888 - 4061849 - f 84 -11.6 -3.20193 | gap 1, opp_overlap 4061848 4061849 4061851, overlap 4061848 4061840 ATAAAATAGATAAAC CACCCTGTTTCGG-TAGTT AAA AACAAACCGAAACAGGCTG CTTATTATCATAAAA TERM 5282 4061849 - 4061888 + F 83 -11.6 -2.90322 | gap 1, opp_overlap 4061849 4061848 4061840, overlap 4061848 4061851 ATAAAATAGATAAAC CACCCTGTTTCGG-TAGTT AAA AACAAACCGAAACAGGCTG CTTATTATCATAAAA TERM 5283 4062190 - 4062166 - g 76 -10.7 -3.40371 | GATGTGATTAACGAA CCGGAAAGTGC TGC GCAGTCTCCGG ATATGGCAATTCCCT EFER_3960 4061959 - 4063353 + | putative outer membrane porin TERM 5284 4063416 - 4063387 - T 74 -6.4 -4.45664 | opp_overlap 4063389 4063412, overlap 4063389 TTAATGCAACCAAAA CACGCCTTCTTC TGGCTG GAAGAGGGCGTT ATAGCGCATTTGGAA TERM 5285 4063389 - 4063414 + T 89 -11.9 -3.32294 | opp_overlap 4063387 4063389, overlap 4063412 AATGCAACCAAAACA CGCCTTCTTCT GGCT GGAAGAGGGCG TTATAGCGCATTTGG TERM 5286 4063414 - 4063389 - T 78 -9 -3.82923 | opp_overlap 4063389 4063412, overlap 4063387 AATGCAACCAAAACA CGCCTTCTTC TGGCTG GAAGAGGGCG TTATAGCGCATTTGG yicN 4063824 - 4063372 - | hypothetical protein TERM 5287 4063496 - 4063475 - G 70 -5.7 -4.43501 | opp_overlap 4063492, overlap 4063479 AACTCACGGAGAAAA CCCAGCGCC AGAC GGACCTGGG CATCAGTGATTGGCG ade 4064110 - 4065876 + | cryptic adenine deaminase TERM 5288 4065904 - 4065886 - T 100 -13.1 -6.22691 | opp_overlap 4065900 GAATAATAAAAAAAA GCCCGGC GTCAT GCCGGGC GAAAGTCACCAGTTA uhpT 4067314 - 4065923 - | hexose phosphate transporter TERM 5289 4066747 - 4066733 - G 70 -6.4 -4.20368 | GGACGGGAAGATAAA CATGCC GAT GACATG ACCGTCAAACAGGTA TERM 5290 4067275 - 4067297 + g 71 -9.1 -3.53012 | CTTCGAGCGGAAGGT CCAGGGTCG GCTTG CGAACCTGG TTTAAGAAAGCCAGC uhpC 4068771 - 4067452 - | membrane protein regulates uhpT expression TERM 5291 4067734 - 4067722 - G 73 -9.1 -3.65581 | ACCAATGGTGAAGAA GCAGG TTG CCTGC ATCACGTAGCTGGCA uhpB 4070283 - 4068781 - | sensory histidine kinase in two-component regulatory sytem with UhpA TERM 5292 4069073 - 4069042 - G 72 -8 -3.88498 | opp_overlap 4069042 4069041 4069044 CTGGCAGACACGAAA CAGCGTCACGCG CTGGTTTT CGCTTAACGCTG ATTCATCGATTCGCC uhpA 4070873 - 4070283 - | DNA-binding response regulator in two-component regulatory system wtih UhpB TERM 5293 4070923 - 4070899 - R 100 -12.2 -5.40072 | opp_overlap 4070886 4070898 4070896 4070899 TGGCGGGTAAAAAAA CGCGCTTACC TTAAC GATAAGCGCG ATGTTGTTCAAGCCT TERM 5294 4070899 - 4070923 + r 71 -10 -2.63252 | opp_overlap 4070899, overlap 4070886 4070898 4070896 TGGCGGGTAAAAAAA CGCGCTTACC TTAAC GATAAGCGCG ATGTTGTTCAAGCCT ilvN 4071236 - 4070946 - | acetolactate synthase I, small subunit TERM 5295 4071077 - 4071088 + g 74 -5.8 -4.45485 | overlap 4071084 CGTCATTGACCAGTA GCCA GATG TGGC TTTTGTCGCTGTCCT ilvB 4072928 - 4071240 - | acetolactate synthase I, large subunit TERM 5296 4072436 - 4072448 + g 70 -10.5 -2.71731 | TGTCTATCCACACCG GGCCG GGG CGGCC TGATTGCGCAATACG TERM 5297 4072982 - 4073006 + r 100 -11.4 -4.16279 | gap 1, opp_overlap 4072982, overlap 4072959 TGCTTAAACGAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 5298 4073006 - 4072982 - R 100 -10.7 -4.98531 | gap 1, opp_overlap 4072959 4072982 TGCTTAAACGAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG ivbL 4073132 - 4073034 - | ilvB operon leader peptide TERM 5299 4073069 - 4073105 + g 70 -5.8 -4.27584 | gap 1, overlap 4073078 CCACCACCACACGCA CGACGACC-ACTGCGGC TGAT GGCGCAGTTGGTAGTAG TTTTGCGTTGAGCAT TERM 5300 4073283 - 4073268 - H 100 -8.2 -5.4833 | opp_overlap 4073268 GCAGGTAACAAAAAA CCCCGC CGGA GCGAGG TTTCGTCAGCCGCCC TERM 5301 4073809 - 4073830 + H 100 -13 -3.9344 | opp_overlap 4073809 TCAAGTCGCACCAAA GGGGAGCG GGAAAA CGCTCCCC TTTCATATTCGGCTT TERM 5302 4073830 - 4073809 - H 100 -13 -3.74747 | opp_overlap 4073809 TCAAGTCGCACCAAA GGGGAGCG GGAAAA CGCTCCCC TTTCATATTCGGCTT TERM 5303 4073900 - 4073919 + H 73 -3.5 -4.93288 | overlap 4073901 GACCCACAGCCCTTT CCGGCAA CATATA TTGCCGC TTTTGTTTACATATT emrD 4074065 - 4075249 + | multidrug efflux system protein TERM 5304 4075260 - 4075277 + T 71 -9.1 -3.28217 | opp_overlap 4075260, overlap 4075255 TTTAATTCATTATAA GGTGGCC TTCG GGCTACC TTACCTGTTCTTTTA dsdC 4076205 - 4075273 - | DNA-binding transcriptional dual regulator TERM 5305 4076360 - 4076371 + H 82 -2.2 -5.626 | AATTTTATCGTTTGT CAGC CTGC GTTG TTTTTTTGTCCAATA TERM 5306 4076854 - 4076886 + G 73 -11.3 -2.78216 | overlap 4076852 TAAAGCTGGCCATTC CGCTGTGTACTGC ATTGATG GCAGTGCACTGCG TGGTTCCTCCACATC dsdX 4076418 - 4077755 + | putative transporter TERM 5307 4078161 - 4078127 - g 70 -5.6 -4.36914 | opp_overlap 4078128 TCCGGCTCCATAAAA GCACGCGGCGGGATTT ATG AAGTCCTGGCACATGC AGAAAAACTGGCTCT dsdA 4077773 - 4079101 + | D-serine ammonia-lyase EFER_3974 4079618 - 4079109 - | putative sulfur metabolism regulator TERM 5308 4079213 - 4079202 - G 74 -2.2 -5.03314 | GCTATGTTCAAAAAA GGCT TTAT AACC TTCGCATAGTGCGCT TERM 5309 4079215 - 4079227 + g 74 -3.3 -5.00884 | overlap 4079216 AAGGCTTTATAACCT TCGCA TAG TGCGC TTTTTTCACAAACGT TERM 5310 4079589 - 4079603 + g 100 -10 -5.10154 | opp_overlap 4079589 4079588 4079591 TTCTCGCTCTACAAC CAGTGG ATG CCACTG TTTTTGGTTTTCCAT yidG 4080017 - 4079631 - | conserved hypothetical protein; putative inner membrane protein yidH 4080330 - 4079983 - | conserved hypothetical protein; putative inner membrane protein TERM 5311 4080307 - 4080323 + gr 74 -2.9 -4.90477 | overlap 4080307 ACGGTAATCCGGCGC TTCTCCG AGG CGGGAAA TTTTCATTTTTTCTC TERM 5312 4080644 - 4080616 - R 95 -13.1 -2.98823 | opp_overlap 4080611 4080620 CTGTTTTTACATATA CTGACCGGCAGCC AAA GGATGCCGGTCAT TCCGCTTAATGCAGT TERM 5313 4080620 - 4080640 + r 89 -12.5 -2.75957 | opp_overlap 4080616, overlap 4080611 TTTTACATATACTGA CCGGCAGCC AAA GGATGCCGG TCATTCCGCTTAATG EFER_3977 4081972 - 4080650 - | 6-phospho-glucosidase TERM 5314 4081077 - 4081093 + g 75 -5.1 -4.60487 | GCAGTAATAGCACGG CAAGAGT TAA ACACTTG TTTTTCACGGTGATC EFER_3978 4083582 - 4081972 - | putative PTS system alpha-glucoside-specific EIICB component TERM 5315 4082627 - 4082664 + g 73 -4.1 -4.80453 | gap 1, overlap 4082633 CCTACTAACATAGCT GTTAATGTTGCCGGAACT AAT AGC-CCGGCGACTTTGGC TTTATTTTCTGGTGA yidP 4083877 - 4084593 + | putative transcriptional regulator TERM 5316 4084625 - 4084613 - T 75 -5.5 -4.77165 | overlap 4084615 TTCCCCAGAACAAAA CAGCC AGC AGCTG TGGCGTGATAATTCG yidE 4086359 - 4084590 - | putative transporter TERM 5317 4085782 - 4085758 - G 72 -5.7 -4.49756 | CCGCAAATACCAAAA GGATACGCCAT TGC ATAGCTCATCC CCATTTGGTCTACCA TERM 5318 4086024 - 4086010 - G 79 -4.2 -5.05782 | overlap 4086011 AGCGAGGCGAAAAAA CCAGGC CCC ACCTGA ATGCCGATTGTATAA TERM 5319 4086357 - 4086337 - G 100 -16.9 -5.42265 | GTAAAGCACAAAAAA GCCCCGACA CGG TGTCGGGGC AAAGAGAATAGCTAA ibpB 4086840 - 4086373 - | heat shock chaperone ibpA 4087326 - 4086913 - | heat shock chaperone yidQ 4087632 - 4087964 + | conserved hypothetical protein; putative outer membrane protein yidR 4089180 - 4087966 - | hypothetical protein TERM 5320 4088408 - 4088369 - G 72 -8.4 -3.71649 | gap 1, opp_overlap 4088372 TGGGTAAAGGTTAAA CGTCGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGGTTG TTTCCGTTCCACTTA TERM 5321 4088372 - 4088405 + g 100 -13.1 -4.0098 | gap 1, opp_overlap 4088369 GTAAAGGTTAAACGT CGCTGCACGACGCCAC GCG GTGGCG-CGGGCAGGG TTGTTTCCGTTCCAC TERM 5322 4088652 - 4088662 + g 70 -4.6 -4.4715 | TGCCGCTGTATTCAC GCGG ATG CTGC TTTTGTACGTTGACC TERM 5323 4089396 - 4089382 - g 73 -4.2 -4.82901 | overlap 4089385 4089386 CGCGCTGGATAAAAA GCACCA GTG CGGTAC TGAAGGTTTCAACAA TERM 5324 4090156 - 4090170 + G 70 -10 -3.20348 | overlap 4090142 CTATGCGCTGGATAG CGCAGA TAT TCTGCG TTCGGTGTTACTGAA TERM 5325 4090287 - 4090266 - g 95 -9.4 -4.98616 | opp_overlap 4090266 GCAAAATAGTAAAAA GCCGATGC CTGACC GCACCGGC TTTAAGAAAATGGAT TERM 5326 4090330 - 4090298 - g 84 -7.8 -4.63218 | opp_overlap 4090305 CCGGCTTTAAGAAAA TGGATTATGCGC AGTGGTGTG GCGCATATTCCA CAGTTGAAAGATTAT cbrA 4089260 - 4090381 + | putative oxidoreductase with FAD/NAD(P)-binding domain dgoT 4091634 - 4090342 - | D-galactonate transporter TERM 5327 4090942 - 4090963 + g 72 -7.3 -4.17608 | gap 1 CAGTTTCCAGTCTTT GGCG-GTTAG CGG CTGACGCGCC TCTTTTTTCACTGGC dgoD 4092902 - 4091754 - | galactonate dehydratase dgoA 4093516 - 4092899 - | 2-oxo-3-deoxygalactonate 6-phosphate aldolase TERM 5328 4093078 - 4093090 + g 82 -9.1 -4.17491 | AGACCGGGATGTCCT GCGGT AAT ACCGC TTTTAACGCTTTGAT dgoK 4094378 - 4093500 - | 2-oxo-3-deoxygalactonate kinase dgoR 4095064 - 4094375 - | putative DNA-binding transcriptional regulator TERM 5329 4094946 - 4094923 - G 79 -4.5 -4.88407 | TCAGCGAACGAAAAA CCTCACGGA TGATGT TGCGCGAGG TTGCAAACTCCTCAC yidX 4095342 - 4095998 + | putative lipoprotein C TERM 5330 4096046 - 4095996 - T 90 -11.4 -3.57418 | gap 1, opp_overlap 4095999 4096002, overlap 4095999 TATGCAGTAAACCAA TAATCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGTCCACTAATTA ATTCAGCACATACTT TERM 5331 4096043 - 4095999 - T 80 -8.7 -3.91541 | gap 1, opp_overlap 4095999 4096002, overlap 4095996 GCAGTAAACCAATAA TCAGTAAGCGGGCAAAC-GC GTTTAT GCTGTTTGCCCGTCCACTAA TTAATTCAGCACATA yidA 4096856 - 4096044 - | putative hydrolase TERM 5332 4096764 - 4096776 + g 72 -5.5 -4.56775 | GCCACGGGCGCGAGC TGCGG CAA TCGCA TTTTTAACGGCGGGT yidB 4097369 - 4096971 - | hypothetical protein TERM 5333 4097472 - 4097452 - R 100 -16.9 -5.38054 | opp_overlap 4097452 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTCTTATAACTTCA TERM 5334 4097452 - 4097472 + r 100 -16.9 -4.35604 | opp_overlap 4097452 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTCTTATAACTTCA gyrB 4099949 - 4097535 - | DNA gyrase, subunit B TERM 5335 4099539 - 4099562 + g 77 -6.6 -4.56597 | ACGGTGAATTTTACC CTCGCGCTGG ATAA CCAGCTCCAG TTTTTGCGACAGGGC recF 4101051 - 4099978 - | gap repair protein TERM 5336 4100554 - 4100572 + g 70 -11 -2.76263 | overlap 4100556 ATAACGAGTCACCTG GCGCAGTG CCG CATTGCGC TGCTTGAGTAATCGC TERM 5337 4100918 - 4100899 - G 73 -9.2 -3.63968 | overlap 4100892 CTGCAAACTGCGAAA CGCCCGAC CGTG GCCGAGCG TATAGATGGCTTCCA dnaN 4102151 - 4101051 - | DNA polymerase III, beta subunit dnaA 4103568 - 4102156 - | chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator TERM 5338 4103084 - 4103124 + g 72 -8.3 -3.75153 | gap 1, overlap 4103088 4103092 GCACCGCCAGGGTTA TCT-GCCACCTGGCGAGC CGCCGC GCGCGCCAGTTGGTTAGA TTTACCTTCAACGAA TERM 5339 4103088 - 4103119 + g 80 -11.5 -3.30781 | overlap 4103084 4103092 CGCCAGGGTTATCTG CCACCTGGCGAGC CGCCGC GCGCGCCAGTTGG TTAGATTTACCTTCA TERM 5340 4103092 - 4103115 + g 71 -9.5 -3.43217 | overlap 4103088 4103084 AGGGTTATCTGCCAC CTGGCGAGC CGCCGC GCGCGCCAG TTGGTTAGATTTACC TERM 5341 4103251 - 4103228 - G 76 -11 -3.33261 | gap 1, opp_overlap 4103240 4103242 CCGGAACGCGTAGAA GGCGCAGCACG TTG CG-GCTGCACC TGAGCTGCCTGAGCA rpmH 4104163 - 4104303 + | 50S ribosomal subunit protein L34 TERM 5342 4104504 - 4104484 - gf 74 -2.6 -5.06816 | gap 1 AGTCGCCAAGAAAAA CGTTCGACG CGCC CAT-GAACG CAATCGGATTAAACG rnpA 4104320 - 4104679 + | protein C5 component of RNase P yidD 4104643 - 4104900 + | hypothetical protein yidC 4104903 - 4106549 + | cytoplasmic insertase into membrane protein, Sec system TERM 5343 4106593 - 4106574 - f 85 -9.2 -4.17048 | opp_overlap 4106575, overlap 4106575 TTTTCGCTAAAATAA GGGCGGTC AGTT GACCGCCT TTTTTCTTTTCGTAG TERM 5344 4106592 - 4106575 - f 93 -12.7 -3.09908 | opp_overlap 4106575, overlap 4106574 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5345 4106575 - 4106592 + F 100 -12.7 -5.83211 | opp_overlap 4106575 4106574 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5346 4107677 - 4107663 - g 76 -7.8 -4.20516 | GTGGTACGCAATAAA GCCGAT ATC ACCGGC GAAACGTTGGGGATG trmE 4106655 - 4108019 + | GTPase TERM 5347 4108028 - 4108063 + F 100 -15.6 -3.53712 | gap 1, opp_overlap 4108020 4108033, overlap 4108026 4108029 TAAGTAATCGCACTT ACGAAGCCGCATTCTGA CTG TCAGA-TGCGGCTTCGC TTCATTGTTAACACT TERM 5348 4108029 - 4108062 + F 100 -19.1 -2.71745 | gap 1, opp_overlap 4108020 4108033, overlap 4108028 4108026 AAGTAATCGCACTTA CGAAGCCGCATTCTGA CTG TCAGA-TGCGGCTTCG CTTCATTGTTAACAC TERM 5349 4108058 - 4108033 - f 93 -12.7 -3.1876 | gap 1, opp_overlap 4108029 4108028 4108026 AATCGCACTTACGAA GCCGCATTCTGA CTG TCAGA-TGCGGC TTCGCTTCATTGTTA tnaC 4108262 - 4108336 + | tryptophanase leader peptide TERM 5350 4109206 - 4109190 - g 78 -8 -4.35524 | CTGGCAAACTTAAAA GCGATG TACAG CATCGC GAAGAAATACGATAT tnaA 4108557 - 4109972 + | tryptophanase/L-cysteine desulfhydrase, PLP-dependent TERM 5351 4110167 - 4110177 + G 75 -4.6 -4.85599 | TACCTGTTGATCTTG CCGG CGC CTGG TTTTTCTGGGGTGCC tnaB 4110064 - 4111311 + | tryptophan transporter of low affinity TERM 5352 4111321 - 4111344 + F 93 -12.5 -3.12351 | opp_overlap 4111324 4111337, overlap 4111324 GGCTAATCCGTTCAA GAAGCCAGC GAAATA GCTGGCTTC TTGCCTGTCAGGAAA TERM 5353 4111324 - 4111341 + F 73 -8.4 -3.70773 | opp_overlap 4111324 4111337, overlap 4111321 TAATCCGTTCAAGAA GCCAGC GAAATA GCTGGC TTCTTGCCTGTCAGG TERM 5354 4111341 - 4111324 - f 73 -8.4 -3.62522 | opp_overlap 4111321 4111324, overlap 4111337 TAATCCGTTCAAGAA GCCAGC GAAATA GCTGGC TTCTTGCCTGTCAGG TERM 5355 4111775 - 4111786 + GF 70 -5.8 -4.18018 | overlap 4111773 GCTGTTGTTACGTGG TGGC GTTC GCCA TTTTACGTGACACAC TERM 5356 4112259 - 4112271 + GF 74 -7.7 -4.06419 | ACGTACGTTGATGAT CACCT CGC AGGTG TTATTTCTGGCGGCG mdtL 4111444 - 4112619 + | multidrug efflux system protein yidZ 4112585 - 4113553 + | putative DNA-binding transcriptional regulator TERM 5357 4113985 - 4113961 - g 71 -9.3 -3.55444 | overlap 4113963 TGCTTATGCGGGAAA TATGGTGGGTG TAG CACTCACCACA GAAGGCGAGTGTGGG TERM 5358 4113983 - 4113963 - g 72 -9.7 -3.35597 | overlap 4113961 CTTATGCGGGAAATA TGGTGGGTG TAG CACTCACCA CAGAAGGCGAGTGTG EFER_4008 4113701 - 4114450 + | putative phosphopantetheinyl transferase yieF 4114461 - 4115027 + | chromate reductase, Class I, flavoprotein TERM 5359 4115076 - 4115047 - T 72 -8 -3.75169 | opp_overlap 4115037 TATCAGCGTAGTAAA TATGCGTGTTTT TTTAGT AAAGCACGCATA TCCGATGTGATGTAA EFER_4010 4115264 - 4115109 - | hypothetical protein EFER_4011 4115459 - 4115268 - | hypothetical protein TERM 5360 4115475 - 4115493 + r 83 -8.8 -4.14945 | GTTTCTATACGTTAA TGGGCGAT TTG ACCGCCCA TTTCGTTATTCTTAG yieG 4116842 - 4115505 - | conserved hypothetical protein; putative inner membrane protein TERM 5361 4116585 - 4116555 - G 71 -2.4 -4.89729 | CACAAAAGCGAAAAA GGCGTTAAGTCCCA TCG CAGGAGCCAGCGCC ACCGGAAGGTTTGCA yieH 4117008 - 4117673 + | putative hydrolase yieI 4117740 - 4118213 + | conserved hypothetical protein; putative inner membrane protein EFER_4015 4118262 - 4118843 + | hypothetical protein TERM 5362 4118893 - 4118862 - T 100 -8 -6.23545 | gap 1, opp_overlap 4118864, overlap 4118864 TTTAAATAAAAAAAA CAGGCCGGA-GCGTA ATT CACACATCCGGCCTT ATATTTTAAGCTAAT TERM 5363 4118891 - 4118864 - T 100 -10.6 -4.74858 | gap 1, opp_overlap 4118864, overlap 4118862 TAAATAAAAAAAACA GGCCGGA-GCGTA ATT CACACATCCGGCC TTATATTTTAAGCTA TERM 5364 4118864 - 4118891 + T 74 -7.7 -3.96506 | gap 1, opp_overlap 4118864 4118862 TAAATAAAAAAAACA GGCCGGA-GCGT AATTC ACACATCCGGCC TTATATTTTAAGCTA yieK 4119615 - 4118899 - | putative 6-phosphogluconolactonase yieL 4120826 - 4119630 - | putative xylanase bglH 4122442 - 4120826 - | carbohydrate-specific outer membrane porin, cryptic TERM 5365 4122130 - 4122146 + g 74 -2.1 -5.16206 | opp_overlap 4122131, overlap 4122131 TGGAAGAATAAATCG AGCCTGT CTC ACTGGCA TTTTTCTCTTCATTT TERM 5366 4122506 - 4122475 - R 75 -10.2 -2.80303 | opp_overlap 4122475, overlap 4122474 4122470 4122478 CAAGAAAGAATTAAC GCATCGCATCCAGA CTGT TCTGAATGCGACGA TAATTAAGGTGCTTT TERM 5367 4122503 - 4122478 - R 88 -12.7 -2.64572 | opp_overlap 4122475, overlap 4122475 4122474 4122470 GAAAGAATTAACGCA TCGCATCCAGA CTGT TCTGAATGCGA CGATAATTAAGGTGC bglB 4123921 - 4122527 - | cryptic phospho-beta-glucosidase B bglF 4125889 - 4123940 - | fused beta-glucoside-specific PTS enzymes: IIA component ; IIB component ; IIC component bglG 4126784 - 4125948 - | transcriptional antiterminator of the bgl operon TERM 5368 4126847 - 4126814 - R 100 -7.4 -6.02919 | opp_overlap 4126814 TTATAAACAAAAAAA CCCGACTTCACCAG TATTCT CTGGTTATGTCAGG TTTTGCCTGCGAATG TERM 5369 4127030 - 4127060 + r 100 -17.2 -3.82531 | opp_overlap 4127030 4127034, overlap 4127034 TAAAGTTATATATAA CAAATCCCAATAAT TAA ATTATTGGGATTTG TTTGGTGAATTATTT TERM 5370 4127060 - 4127030 - R 100 -17.2 -3.63054 | opp_overlap 4127030 4127034, overlap 4127034 TAAAGTTATATATAA CAAATCCCAATAAT TAA ATTATTGGGATTTG TTTGGTGAATTATTT TERM 5371 4127056 - 4127034 - R 100 -12.2 -4.42974 | opp_overlap 4127034 4127030, overlap 4127030 GTTATATATAACAAA TCCCAATAAT TAA ATTATTGGGA TTTGTTTGGTGAATT TERM 5372 4127034 - 4127056 + r 100 -12.2 -4.5123 | opp_overlap 4127030 4127034, overlap 4127030 GTTATATATAACAAA TCCCAATAAT TAA ATTATTGGGA TTTGTTTGGTGAATT phoU 4127795 - 4127070 - | negative regulator of PhoR/PhoB two-component regulator pstB 4128583 - 4127810 - | phosphate transporter subunit ; ATP-binding component of ABC superfamily pstA 4129565 - 4128675 - | phosphate transporter subunit ; membrane component of ABC superfamily pstC 4130524 - 4129565 - | phosphate transporter subunit ; membrane component of ABC superfamily pstS 4131650 - 4130610 - | phosphate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5373 4130889 - 4130907 + g 77 -6 -4.67982 | overlap 4130890 GCTCCAGTCTGCGCC TTTTGCCG CAT TGGCAAAG TTTTCTTCGGTCGGC TERM 5374 4131891 - 4131914 + r 79 -11 -3.12449 | opp_overlap 4131893, overlap 4131889 4131885 4131893 GTGAGGGAATAGAAA AATGCCCTGC GAAA GCAGGGCATC TGTGTATTACTCAAC TERM 5375 4131912 - 4131893 - R 100 -13.6 -5.10767 | opp_overlap 4131891 4131889 4131885 4131893 GAGGGAATAGAAAAA TGCCCTGC GAAA GCAGGGCA TCTGTGTATTACTCA TERM 5376 4131893 - 4131912 + r 100 -13.6 -3.11951 | opp_overlap 4131893, overlap 4131891 4131889 4131885 GAGGGAATAGAAAAA TGCCCTGC GAAA GCAGGGCA TCTGTGTATTACTCA glmS 4133750 - 4131921 - | L-glutamine:D-fructose-6-phosphate aminotransferase TERM 5377 4132939 - 4132953 + g 75 -4.9 -4.74801 | overlap 4132922 TGGCCGTGGCTGATA CGCCC GGTAA GGGTG TTTTTGATCGCGTTC glmU 4135282 - 4133912 - | fused N-acetyl glucosamine-1-phosphate uridyltransferase ; glucosamine-1-phosphate acetyl transferase TERM 5378 4134520 - 4134507 - G 70 -5.2 -4.34402 | overlap 4134508 CCGCGTAGATCAAAA CGCG CCGGAT CGCG CAGCATAACGCCTGC TERM 5379 4134532 - 4134544 + g 84 -7.7 -4.62302 | CGCGCAGCATAACGC CTGCT AAA AGCAG TTTTTCAGCCTGTTC TERM 5380 4135542 - 4135523 - R 100 -12.2 -4.27796 | opp_overlap 4135523, overlap 4135515 GAATAAACGGGAAAA CCAGCGAA TAAT TTCGCTGG TTTATACAAGCAGGG TERM 5381 4135523 - 4135542 + r 100 -12.2 -3.85698 | opp_overlap 4135523 4135515 GAATAAACGGGAAAA CCAGCGAA TAAT TTCGCTGG TTTATACAAGCAGGG EFER_4029 4136256 - 4135558 - | hypothetical protein TERM 5382 4136404 - 4136435 + r 77 -10.2 -3.08032 | opp_overlap 4136409, overlap 4136409 AGCGAAATACATATA AAAAAGCCAGCCTG TTTC CAGACTGGCTTTTG TGCTTTTCAAGCCGG TERM 5383 4136430 - 4136409 - R 100 -12.3 -5.46276 | opp_overlap 4136404 4136409 AATACATATAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA TERM 5384 4136409 - 4136430 + r 100 -10.1 -4.67635 | opp_overlap 4136409, overlap 4136404 AATACATATAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA atpC 4136872 - 4136453 - | F1 sector of membrane-bound ATP synthase, epsilon subunit atpD 4138275 - 4136893 - | F1 sector of membrane-bound ATP synthase, beta subunit TERM 5385 4138042 - 4138065 + g 76 -7.4 -4.18018 | CGCTTTACCTACCGG GACTTCGATC GGGT GTTCGAGGTC TTTTACATCCAGACC TERM 5386 4138319 - 4138333 + r 71 -10 -2.57244 | opp_overlap 4138308 4138307, overlap 4138316 AAACCGCGGCGGCCC CCGAGA CGA TCTCGG TGAGTTCCTGAGTAA atpG 4139165 - 4138302 - | F1 sector of membrane-bound ATP synthase, gamma subunit TERM 5387 4138990 - 4139023 + g 100 -14.7 -3.91897 | opp_overlap 4138990 TTATATTCCAGATTA CCGTGTGCAAGGTGA CCAA TCACTTTGCGCATGG TTTCTGCATAAGGAC atpA 4140757 - 4139216 - | F1 sector of membrane-bound ATP synthase, alpha subunit atpH 4141303 - 4140770 - | F1 sector of membrane-bound ATP synthase, delta subunit TERM 5388 4141129 - 4141173 + g 72 -5.1 -4.50686 | gap 3, opp_overlap 4141124 4141127, overlap 4141124 4141130 CTGCGATAAACGACT CGGC-GAGCGT-T-TCTGGCGC AAGC GCGCCAGAGAGAAGCTCTGCCA TTTGTTCGTTTTTGG atpF 4141788 - 4141318 - | F0 sector of membrane-bound ATP synthase, subunit b TERM 5389 4141662 - 4141683 + g 70 -3.7 -4.67353 | CTGCGGAAGCAAGGC CGTCAGCAA TTTC TTTTTGACG TTTTTCGATGGCTGC TERM 5390 4141689 - 4141717 + g 73 -11.8 -2.77899 | gap 1, overlap 4141686 CTTTTTGACGTTTTT CG-ATGGCTGCCA TTAA TGGCGGCCATACG TACTTCATGCAGAAC atpE 4142089 - 4141850 - | F0 sector of membrane-bound ATP synthase, subunit c atpB 4142951 - 4142136 - | F0 sector of membrane-bound ATP synthase, subunit a TERM 5391 4142638 - 4142618 - G 74 -11.1 -3.17229 | overlap 4142605 4142616 AGTTCATCAGGAATA CCCAGACGA AAA TCGTCAGGG CCAGCGGAGCAATCA atpI 4143340 - 4142960 - | ATP synthase, membrane-bound accesory subunit TERM 5392 4143142 - 4143114 - G 70 -10.9 -2.7264 | opp_overlap 4143114 4143125 4143131, overlap 4143103 4143113 AAAGCTTCGCCAAAT GCGAATGTCCAGG CCA CCCGGCCTTTCGC TGGTGTATGTGCCTG gidB 4144578 - 4143955 - | methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein TERM 5393 4144631 - 4144602 - R 90 -12.9 -2.52464 | opp_overlap 4144603 4144626, overlap 4144614 CCTGTTCTGAATGCA GTGGCGGGTAAAC AGGT GCTTACCCGCCAT TTTTAATGCGTTATG TERM 5394 4144603 - 4144630 + r 100 -14.2 -4.77759 | opp_overlap 4144602 4144614, overlap 4144626 CTGTTCTGAATGCAG TGGCGGGTAAAC AGGT GCTTACCCGCCA TTTTTAATGCGTTAT gidA 4146531 - 4144642 - | glucose-inhibited cell-division protein mioC 4147353 - 4146910 - | FMN-binding protein MioC asnC 4147901 - 4147443 - | DNA-binding transcriptional dual regulator TERM 5395 4148095 - 4148106 + G 70 -4.4 -4.46926 | CGTCAAATTAGCTTC GTGA AATC TCAC TTTTCTCGTCAACTG TERM 5396 4148362 - 4148307 - g 100 -17.1 -2.75074 | gap 2 CTTAGGGCAACACGA CTTCAGCGCGGGCGAAGGGCTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGTCTTTCCCCGT asnA 4148053 - 4149045 + | asparagine synthetase A yieM 4150501 - 4149050 - | putative von Willibrand factor containing protein TERM 5397 4149373 - 4149354 - G 76 -3.5 -5.00616 | opp_overlap 4149354 4149355 4149358, overlap 4149355 CGCTGGCTTAAAAAA CGGATCG CCTGTT CGATCCC TTGTGGACAGGAGAG ravA 4152015 - 4150495 - | fused regulatory ATPase variant A ; conserved hypothetical protein TERM 5398 4151217 - 4151227 + g 85 -8.2 -4.56597 | opp_overlap 4151217 CACTGGCTTGTAACA GGCG AAT CGCC TTTTTCCAGCGACGG TERM 5399 4152142 - 4152156 + H 71 -4.2 -4.82901 | overlap 4152141 ATTTTGCGATTAATC GTGCAT ACT GTGCGC TTTTTGTGGGCCAAG TERM 5400 4152461 - 4152519 + G 70 -11.1 -2.83271 | opp_overlap 4152493, overlap 4152508 4152514 CGGTGAAGGGGGAAT CCTGACGTTGATGTCGCTTGC-CGGGCGT AAT ACGTCGGCGCGAACGACATCAATG-CTGG TGATTATGGGGCTAA TERM 5401 4152704 - 4152690 - g 70 -4.2 -4.68593 | TTTATGATTCAAAAA CATGGC ACT GCTATG GTCGGTAAGCTGTTT trkD 4152213 - 4154081 + | potassium transporter TERM 5402 4154086 - 4154116 + F 70 -5.4 -4.47007 | overlap 4154084 4154089 TCGAAATCTAACGCC AGACGCCTCCTT TCTCCAT AAGGGGGCGTTA TTGTTTTCATTTTTA TERM 5403 4154089 - 4154113 + F 88 -9.3 -4.27914 | overlap 4154086 4154084 AAATCTAACGCCAGA CGCCTCCTT TCTCCAT AAGGGGGCG TTATTGTTTTCATTT rbsD 4154248 - 4154667 + | putative cytoplasmic sugar-binding protein rbsA 4154675 - 4156180 + | fused D-ribose transporter subunits of ABC superfamily: ATP-binding components rbsC 4156185 - 4157150 + | D-ribose transporter subunit ; membrane component of ABC superfamily rbsB 4157175 - 4158065 + | D-ribose transporter subunit ; periplasmic-binding compoent of ABC superfamily TERM 5404 4158147 - 4158171 + F 93 -9.9 -4.38712 | opp_overlap 4158143 4158140, overlap 4158148 AAGAAAAGCAGGGCA CGCGCCACCCT AAC ACGGTGGCGCA TTTTATGGACATCCC TERM 5405 4158148 - 4158170 + F 100 -13.4 -3.22906 | opp_overlap 4158143 4158140, overlap 4158147 AGAAAAGCAGGGCAC GCGCCACCCT AAC ACGGTGGCGC ATTTTATGGACATCC TERM 5406 4158847 - 4158836 - g 75 -4.4 -4.7373 | overlap 4158840 GTACTGCATGAAAAA GGTA TCCG TACC GTACTGATCACCTTA rbsK 4158191 - 4159120 + | ribokinase TERM 5407 4159144 - 4159160 + G 90 -11.5 -3.91897 | opp_overlap 4159142, overlap 4159145 TACAATGAAAGATGT TGCCCGC CTG GCGGGCG TTTCTACCTCAACAG TERM 5408 4159145 - 4159159 + G 78 -12.8 -2.94924 | opp_overlap 4159142, overlap 4159144 ACAATGAAAGATGTT GCCCGC CTG GCGGGC GTTTCTACCTCAACA rbsR 4159124 - 4160116 + | DNA-binding transcriptional repressor of ribose metabolism TERM 5409 4160150 - 4160123 - T 90 -10.7 -4.05788 | opp_overlap 4160122 4160119 4160123 TCGGTTTAAATCAAA CGGTATGGACA GATCCA TATCCATACCG CTCTGTTTATTTATC yieP 4160861 - 4160157 - | putative transcriptional regulator TERM 5410 4162952 - 4162939 - R 76 -6.7 -4.41177 | overlap 4162943 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5411 4163179 - 4163155 - R 74 -8 -3.93061 | gap 1, opp_overlap 4163162 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5412 4166393 - 4166374 - R 100 -13.6 -3.45776 | opp_overlap 4166374 TCAAATTTAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCATTGGTGC TERM 5413 4166374 - 4166393 + r 100 -13.6 -4.7629 | opp_overlap 4166374 TCAAATTTAGCAGAA GGCCATCC TGAC GGATGGCC TTTTTGCATTGGTGC yjaB 4166920 - 4166477 - | putative acetyltransferase TERM 5414 4167225 - 4167235 + G 75 -5.4 -4.60889 | opp_overlap 4167225 CGAAGAAGATTGAAA CTGA AAA TCAG TTTTTGCGCCTGCTT metA 4167077 - 4168006 + | homoserine transsuccinylase TERM 5415 4168067 - 4168052 - f 74 -10.4 -2.72661 | opp_overlap 4168052 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA TERM 5416 4168052 - 4168067 + F 100 -10.4 -5.63517 | opp_overlap 4168052 CAGCATGTTGAATCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4168275 - 4169876 + | malate synthase A TERM 5417 4170110 - 4170095 - g 77 -3.2 -5.0538 | overlap 4170106 4170108 GGTGAGTCGAAAAAA GGCTAC ATCA ACAGCC TCGGCGCACTGACTG aceA 4169906 - 4171210 + | isocitrate lyase TERM 5418 4171243 - 4171218 - f 80 -10.3 -3.53712 | AGTTCTAATAACCAA CGCCCCTTTCC GTAA GGCGAGGGGCG AATTAAGGAGAGGCG TERM 5419 4171540 - 4171561 + G 79 -3.6 -5.09895 | GTTGCCGGACTACCC GCGCTTCG AGATTG CGGAGAGC TTTTTTAACTCCGTG TERM 5420 4172475 - 4172460 - g 95 -6.8 -5.33785 | AAGCAGCAGAAAAAA TCACCG ATCT CGGCGA ACAGATAGTGATTCG aceK 4171259 - 4172992 + | isocitrate dehydrogenase kinase/phosphatase EFER_4070 4173017 - 4174474 + | DNA modification methylase TERM 5421 4174520 - 4174472 - T 100 -11.3 -5.68039 | gap 1, opp_overlap 4174476 4174477, overlap 4174476 4174477 AAATCGATAAAAAAA TAAATTGAT-CGTTATACCCGG CACGCT CCGGGTATAACGCATCACTTTT CTTACCGCATTCCAC TERM 5422 4174516 - 4174476 - T 100 -12.1 -5.27709 | gap 1, opp_overlap 4174476 4174477, overlap 4174472 4174477 CGATAAAAAAATAAA TTGAT-CGTTATACCCGG CACGCT CCGGGTATAACGCATCAC TTTTCTTACCGCATT TERM 5423 4174476 - 4174516 + T 100 -12.1 -4.64334 | gap 1, opp_overlap 4174476 4174472 4174477, overlap 4174477 CGATAAAAAAATAAA TTGAT-CGTTATACCCGG CACGCT CCGGGTATAACGCATCAC TTTTCTTACCGCATT TERM 5424 4174477 - 4174515 + T 100 -15.6 -3.37877 | gap 1, opp_overlap 4174476 4174472 4174477, overlap 4174476 GATAAAAAAATAAAT TGAT-CGTTATACCCGG CACGCT CCGGGTATAACGCATCA CTTTTCTTACCGCAT TERM 5425 4174515 - 4174477 - T 100 -15.6 -3.74185 | gap 1, opp_overlap 4174477 4174476, overlap 4174476 4174472 GATAAAAAAATAAAT TGAT-CGTTATACCCGG CACGCT CCGGGTATAACGCATCA CTTTTCTTACCGCAT iclR 4175346 - 4174522 - | DNA-binding transcriptional repressor TERM 5426 4175302 - 4175322 + g 70 -6.7 -4.07568 | overlap 4175303 AGCGGGGGCGGTGGC AGCGGCGGG TTT TCTGCCGCG TTTTGCGGGAACAGG TERM 5427 4175370 - 4175384 + H 77 -3.6 -5.17744 | CCTTTTTCTGTATCG TGGAAA TCA TTTTCA TTTTTATTGCTATCT TERM 5428 4178277 - 4178240 - g 70 -6.2 -4.1552 | gap 1, overlap 4178227 4178241 CATGGGCGCAAGAAA CCGCGCA-CACCGCCAG TCACG CTGGAAGCGGCGCGCGA TAACGACTTCGCTTT metH 4175546 - 4179229 + | homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent TERM 5429 4179237 - 4179258 + F 100 -12.3 -3.8647 | opp_overlap 4179231 4179237 CCGAGTAAATGATAA TACCGGGGT ATTT GCCCCGGTA TTTAATGTCATAAAT TERM 5430 4179258 - 4179237 - f 90 -11.6 -3.62849 | opp_overlap 4179237, overlap 4179231 CCGAGTAAATGATAA TACCGGGG TATTTG CCCCGGTA TTTAATGTCATAAAT EFER_4073 4179283 - 4179609 + | hypothetical protein EFER_4074 4179652 - 4180101 + | hypothetical protein yjbB 4180272 - 4181903 + | putative transporter TERM 5431 4181944 - 4181908 - f 88 -9.5 -4.27441 | opp_overlap 4181907 4181906 4181909, overlap 4181909 ACGAGTATTAAGAAA GCGTTCTGGATAGCAAT AAA ATTGATATCCAGATCGT CAGTTTATGAGGTTT TERM 5432 4181943 - 4181909 - f 95 -13 -3.15742 | opp_overlap 4181907 4181906 4181909, overlap 4181908 CGAGTATTAAGAAAG CGTTCTGGATAGCAAT AAA ATTGATATCCAGATCG TCAGTTTATGAGGTT TERM 5433 4181909 - 4181943 + F 91 -13 -2.71097 | opp_overlap 4181909 4181908, overlap 4181907 4181906 CGAGTATTAAGAAAG CGTTCTGGATAGCAAT AAA ATTGATATCCAGATCG TCAGTTTATGAGGTT TERM 5434 4182123 - 4182095 - g 74 -2.5 -5.06103 | gap 1 AGAACGGCTAAAAAA TCTCGTG-TTCA GGCTCG TGAAGCCCGAGA GGCGGTGGAAGAAAA TERM 5435 4182158 - 4182146 - g 78 -5.5 -4.76233 | GAAGAAAACAAGAAA GCTCA ACT CGAGC GTGATAAACAACTTA yaiL 4181951 - 4182544 + | nucleoprotein/polynucleotide-associated enzyme TERM 5436 4182537 - 4182593 + T 82 -8.2 -4.33417 | gap 1, opp_overlap 4182537 4182585, overlap 4182538 4182539 4182551 TCCCCGATGATTTAA TG-TGGTGATTTTTATTATGAGCGCCT GATT GGGCGCTCATAGTATTAACCACCAATA TTTATTGTGGATGCG TERM 5437 4182538 - 4182591 + T 88 -11.1 -3.76888 | opp_overlap 4182537 4182585, overlap 4182537 4182539 4182551 CCCCGATGATTTAAT GTGGTGATTTTTATTATGAGCGCCT GATT GGGCGCTCATAGTATTAACCACCAA TATTTATTGTGGATG TERM 5438 4182539 - 4182590 + T 100 -14.6 -2.8541 | opp_overlap 4182537 4182585, overlap 4182538 4182537 4182551 CCCGATGATTTAATG TGGTGATTTTTATTATGAGCGCCT GATT GGGCGCTCATAGTATTAACCACCA ATATTTATTGTGGAT TERM 5439 4182551 - 4182578 + T 95 -12.8 -3.01924 | opp_overlap 4182537, overlap 4182539 4182538 4182537 ATGTGGTGATTTTTA TTATGAGCGCCT GATT GGGCGCTCATAG TATTAACCACCAATA EFER_4077 4183917 - 4182697 - | L-sorbose 1-phosphate reductase EFER_4078 4184825 - 4183971 - | sorbose permease IID component EFER_4079 4185603 - 4184806 - | sorbose permease IIC component (PTS system) EFER_4080 4186162 - 4185671 - | sorbose-specific phosphotransferase enzyme IIB component (PTS system) EFER_4081 4186569 - 4186162 - | sorbose-specific phosphotransferase enzyme IIA component (PTS system) EFER_4082 4187430 - 4186579 - | sorbitol-6-phosphate 2-dehydrogenase EFER_4083 4188480 - 4187443 - | sorbitol/sorbose operon regulator (Sor operon activator) TERM 5440 4189074 - 4189084 + G 78 -5.4 -4.87665 | TCTGGATAAAGACTC TCAG GGG CTGA TTTTTCTCACTAACC TERM 5441 4189524 - 4189502 - g 70 -5.4 -4.35926 | overlap 4189504 AGGCCAAACCGAAAA CGGCGGGCAT CAA ACGCCCGGTG GTGAAGATGGAAAAA yjbC 4188745 - 4189617 + | 23S rRNA pseudouridine synthase TERM 5442 4189626 - 4189609 - T 91 -6.9 -5.4505 | overlap 4189610 4189621 GGGCGTAAGAAAAAA GGGCGCT AATC AGCGCCT GCCGCGCGTCGACGT TERM 5443 4189625 - 4189610 - T 86 -10.4 -3.86307 | overlap 4189609 4189621 GGCGTAAGAAAAAAG GGCGCT AATC AGCGCC TGCCGCGCGTCGACG EFER_4086 4191035 - 4189893 - | lipopolysaccharide 1, 2-N-acetylglucosaminetransferase TERM 5444 4190428 - 4190414 - G 70 -5.7 -4.35682 | opp_overlap 4190413 4190411, overlap 4190411 GCATAAGTAAAATAA CTCCT TTTTC AGGAG ATATCCTTCCTGCAT TERM 5445 4192218 - 4192201 - R 91 -6.9 -5.4505 | overlap 4192202 4192213 GGGCGTAAGAAAAAA GGGCGCT AATC AGCGCCT GCCGCGCGTCGACGT TERM 5446 4192217 - 4192202 - R 86 -10.4 -3.86307 | overlap 4192201 4192213 GGCGTAAGAAAAAAG GGCGCT AATC AGCGCC TGCCGCGCGTCGACG yjbD 4192482 - 4192210 - | hypothetical protein TERM 5447 4192914 - 4192886 - g 100 -4.5 -5.68438 | overlap 4192888 TTATTAAATAAAAAA TGGGGGATTGC GCAGTCA GCGATCCCCGA TAACGTCGCCGATAA EFER_4089 4192796 - 4193008 + | hypothetical protein EFER_4090 4193012 - 4194139 + | hypothetical protein TERM 5448 4194686 - 4194676 - g 77 -8.2 -4.14392 | GTTGAAGCGGGAAAA GGCG TAC CGCC AATGCGCTTTGCCGA EFER_4091 4194136 - 4194936 + | hypothetical protein EFER_4092 4195694 - 4194966 - | hypothetical protein TERM 5449 4195057 - 4195027 - G 81 -11.2 -3.57144 | TTTTTTATGCTGAAA CCTGGAACCCAG TGGAGAG CTGTGTTCCAGG GACGAGGTGAACCGT TERM 5450 4195880 - 4195906 + r 79 -8.6 -4.09818 | opp_overlap 4195871 4195884, overlap 4195883 AATATACAGCCTGAT TAAAGCCGGGCT TGA AGCCCGGCGTAG TTTATGGTTGATATT TERM 5451 4195883 - 4195903 + r 93 -12.5 -3.07222 | opp_overlap 4195871 4195884, overlap 4195880 ATACAGCCTGATTAA AGCCGGGCT TGA AGCCCGGCG TAGTTTATGGTTGAT TERM 5452 4195902 - 4195884 - R 100 -16 -3.74251 | opp_overlap 4195883 4195880, overlap 4195871 TACAGCCTGATTAAA GCCGGGCT TGA AGCCCGGC GTAGTTTATGGTTGA EFER_4093 4196363 - 4195908 - | hypothetical protein EFER_4094 4197067 - 4196360 - | putative phage tail fiber assembly protein EFER_4095 4198767 - 4197064 - | putative side tail phage protein TERM 5453 4198535 - 4198564 + gr 72 -10.1 -2.74018 | gap 1, overlap 4198534 4198558 ATATATTTACCATTA CCGTC-GCCAACTA CCA TAGTTTGCAGACGG ATCTGTTTTTGCTCC TERM 5454 4198558 - 4198569 + gr 75 -4.4 -4.7497 | overlap 4198535 4198534 AACTACCATAGTTTG CAGA CGGA TCTG TTTTTGCTCCGTCAA EFER_4096 4199378 - 4198644 - | putative phage tail protein TERM 5455 4199344 - 4199320 - GR 73 -4.2 -4.78149 | gap 1 GCCAGAATCGAAAAA CGCTCATCGCT GGCA AGCGGCG-GCG GTGGCAGCAATTTAT EFER_4097 4200471 - 4199356 - | putative phage baseplate protein EFER_4098 4200821 - 4200462 - | putative phage baseplate protein TERM 5456 4200912 - 4200897 - R 100 -11.8 -5.00027 | ATTAAAAAGAGAAAA CCCGCC ATCA GGCGGG TTAAACGTCAGTGTG EFER_4099 4201621 - 4200920 - | putative phage baseplate component EFER_4100 4202671 - 4201631 - | putative control protein for phage late genes expression TERM 5457 4201911 - 4201930 + g 73 -4.2 -4.76041 | gap 1 GTGTCGGCACTGGTG CCGACT-CC ACG GGCAGACGG TTTTTGCTGGCTGTC EFER_4101 4202871 - 4202659 - | putative phage tail protein EFER_4102 4203821 - 4202868 - | hypothetical protein EFER_4103 4206196 - 4203821 - | putative phage tail protein TERM 5458 4204285 - 4204307 + g 70 -5.6 -4.32177 | opp_overlap 4204285, overlap 4204262 TGATCTGGTCAATAA TGCCTTTC AGAGCGG GGAAGGCA TTTATTATGCCGTCA TERM 5459 4206287 - 4206309 + r 93 -13.5 -2.7808 | opp_overlap 4206287, overlap 4206284 4206282 4206279 4206306 GCGGGCTTTGAAGAA CTCGCAGAC ATCAG GTCTGCGAG TCATATTCGATCTTT TERM 5460 4206309 - 4206287 - R 100 -13.5 -3.61398 | opp_overlap 4206287 4206284 4206282 4206279 4206306 GCGGGCTTTGAAGAA CTCGCAGAC ATCAG GTCTGCGAG TCATATTCGATCTTT EFER_4104 4206425 - 4206297 - | hypothetical protein EFER_4105 4206702 - 4206385 - | hypothetical protein TERM 5461 4206749 - 4206728 - R 78 -10.1 -3.55761 | opp_overlap 4206729, overlap 4206729 TATTTATTTTGCAAA GTTCGGGGC CGTA GCCCCGAAT AACTTAGCCACCGAT TERM 5462 4206748 - 4206729 - R 93 -13.6 -2.73243 | opp_overlap 4206729, overlap 4206728 ATTTATTTTGCAAAG TTCGGGGC CGTA GCCCCGAA TAACTTAGCCACCGA TERM 5463 4206729 - 4206748 + r 91 -13.6 -2.52464 | opp_overlap 4206729 4206728 ATTTATTTTGCAAAG TTCGGGGC CGTA GCCCCGAA TAACTTAGCCACCGA EFER_4106 4207277 - 4206753 - | phage tail core protein EFER_4107 4208707 - 4207277 - | putative phage tail sheath protein TERM 5464 4207576 - 4207592 + g 74 -7.9 -4.14392 | opp_overlap 4207575 ACTCATTAATTACAT CGCCTGT CCG GCGGGCG TTTTCAAAGTTACGC EFER_4108 4208888 - 4208691 - | hypothetical protein EFER_4109 4209340 - 4208885 - | hypothetical protein EFER_4110 4209772 - 4209458 - | putative inner membrane protein EFER_4111 4210489 - 4209785 - | putative soluble lytic murein transglycosylase EFER_4112 4210680 - 4210393 - | putative inner membrane protein TERM 5465 4210778 - 4210768 - H 78 -4 -5.11937 | AATAAGTTTAAAAAA TAGA TTC TCTA TAAATGAACATGCCC TERM 5466 4210999 - 4210974 - H 74 -4.1 -4.94972 | opp_overlap 4210977 4210979, overlap 4210977 CACTACAAGTAAAAA TAATACTGTAT GTGT ATACAGTATCG TGTAAAATGATACAC TERM 5467 4210996 - 4210977 - H 82 -8 -4.56187 | opp_overlap 4210977 4210979, overlap 4210974 TACAAGTAAAAATAA TACTGTAT GTGT ATACAGTA TCGTGTAAAATGATA EFER_4113 4211218 - 4211562 + | putative transcriptional regulator TERM 5468 4211656 - 4211604 - T 83 -10.8 -3.52341 | gap 2, opp_overlap 4211604 4211605, overlap 4211605 4211652 AGGCTAATATCAGAA GTGGCTTGTCATGGTGTAAGCGCTAT AAG ATAGCGCTTACACCA-G-CAAGACGA TTTACGCCGCCGTGA TERM 5469 4211604 - 4211656 + T 100 -13 -3.53444 | gap 2, opp_overlap 4211604 4211605 4211652, overlap 4211605 AGGCTAATATCAGAA GTGGCTTGTCATGGTGTAAGCGCTAT AAG ATAGCGCTTACACCA-G-CAAGACGA TTTACGCCGCCGTGA TERM 5470 4211605 - 4211655 + T 100 -16.5 -2.71924 | gap 2, opp_overlap 4211604 4211605 4211652, overlap 4211604 GGCTAATATCAGAAG TGGCTTGTCATGGTGTAAGCGCTAT AAG ATAGCGCTTACACCA-G-CAAGACG ATTTACGCCGCCGTG TERM 5471 4211655 - 4211605 - T 95 -14.3 -2.70923 | gap 2, opp_overlap 4211605 4211604, overlap 4211604 4211652 GGCTAATATCAGAAG TGGCTTGTCATGGTGTAAGCGCTAT AAG ATAGCGCTTACACCA-G-CAAGACG ATTTACGCCGCCGTG TERM 5472 4211712 - 4211688 - T 71 -8.5 -3.48395 | opp_overlap 4211690, overlap 4211690 ATTGGGTTTAGATAA TACGCCGGG TGTAATT CCCGGCGTT ATTTCACGCCATCAG TERM 5473 4211690 - 4211710 + T 90 -11.1 -3.9122 | opp_overlap 4211688 4211690 TGGGTTTAGATAATA CGCCGGG TGTAATT CCCGGCG TTATTTCACGCCATC TERM 5474 4211710 - 4211690 - T 81 -11.1 -3.31726 | opp_overlap 4211690, overlap 4211688 TGGGTTTAGATAATA CGCCGGG TGTAATT CCCGGCG TTATTTCACGCCATC EFER_4114 4212669 - 4211734 - | putative zeta toxin; poison-antidote element TERM 5475 4211983 - 4212005 + g 71 -2.6 -4.91511 | TTCATTGGTGCTTTC CCAGCTTACC GTC GCTGAGGTGG TTTTTATCATGACGT TERM 5476 4212839 - 4212827 - R 86 -7.7 -4.72863 | TCAAACAAATTAAAA TGCAG CTT CTGCA CAACTTTCTCGGCAT lysC 4214157 - 4212808 - | aspartokinase III TERM 5477 4214526 - 4214559 + G 100 -14.8 -4.93318 | gap 1, opp_overlap 4214522 4214519 AAATGAAAGACGTTA CGATCGCCGATCTTT TTGCT AAAGA-CGGCGATCG TTTTTCTAAGTTCTC pgi 4214450 - 4216099 + | glucosephosphate isomerase TERM 5478 4216151 - 4216108 - T 88 -9.8 -4.0825 | gap 1, opp_overlap 4216094 4216117 4216148, overlap 4216117 4216120 CGGTTAATTAAATAA CCTTA-ATAACAATGCCGACT ATA AGTCGGCATTGTTTTATCAGA TAAATCCCCTTGTCT TERM 5479 4216141 - 4216117 - T 100 -17.3 -3.71353 | opp_overlap 4216117, overlap 4216108 4216120 AAATAACCTTAATAA CAATGCCGACT ATA AGTCGGCATTG TTTTATCAGATAAAT TERM 5480 4216117 - 4216141 + T 100 -17.3 -4.40358 | opp_overlap 4216117 4216108 4216120 AAATAACCTTAATAA CAATGCCGACT ATA AGTCGGCATTG TTTTATCAGATAAAT TERM 5481 4216138 - 4216120 - T 100 -13.2 -3.97139 | opp_overlap 4216117, overlap 4216117 4216108 TAACCTTAATAACAA TGCCGACT ATA AGTCGGCA TTGTTTTATCAGATA EFER_4118 4216683 - 4216435 - | hypothetical protein TERM 5482 4216787 - 4216766 - H 81 -11.7 -2.78216 | opp_overlap 4216766 4216769, overlap 4216769 GACGGGGATTAACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5483 4216766 - 4216787 + H 86 -11.7 -3.32343 | opp_overlap 4216766 4216769, overlap 4216769 GACGGGGATTAACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5484 4216784 - 4216769 - H 73 -9 -3.54029 | opp_overlap 4216766 4216769, overlap 4216766 GGGGATTAACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT TERM 5485 4216769 - 4216784 + H 78 -9 -3.80174 | opp_overlap 4216769 4216766, overlap 4216766 GGGGATTAACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT yjbF 4216811 - 4217449 + | putative lipoprotein yjbG 4217446 - 4218183 + | hypothetical protein TERM 5486 4218336 - 4218307 - g 81 -9.9 -4.00038 | gap 1, opp_overlap 4218305, overlap 4218309 TAGGATTATTACAAA CACCTACCGCGCGC ATG GCGCG-GGAAGGGG AGTTGAGTCTGAACT TERM 5487 4218334 - 4218309 - g 81 -11.1 -3.58864 | gap 1, opp_overlap 4218305, overlap 4218307 GGATTATTACAAACA CCTACCGCGCGC ATG GCGCG-GGAAGG GGAGTTGAGTCTGAA yjbH 4218183 - 4220279 + | putative porin TERM 5488 4220317 - 4220283 - f 78 -9.3 -3.61894 | overlap 4220284 4220286 AATTTCCGCTAACAA GCAGCGCCGAATACA GGAAT CGTATTCGGCGTTGA ACAAAACATACACAA TERM 5489 4220316 - 4220284 - f 91 -12.8 -2.76815 | overlap 4220283 4220286 ATTTCCGCTAACAAG CAGCGCCGAATACA GGAAT CGTATTCGGCGTTG AACAAAACATACACA TERM 5490 4220314 - 4220286 - f 71 -9.6 -2.93073 | overlap 4220284 4220283 TTCCGCTAACAAGCA GCGCCGAATACA GGAAT CGTATTCGGCGT TGAACAAAACATACA yjbA 4220400 - 4220810 + | putative phosphate starvation inducible protein TERM 5491 4220845 - 4220814 - T 81 -7.2 -4.73388 | overlap 4220816 AAGCGGGAGTAAAAA GACAGCACGCCG AACTGGCG CGGCGTGCTGGA CAGGAAGATTACAGC TERM 5492 4220843 - 4220816 - T 100 -14.2 -3.98256 | overlap 4220814 GCGGGAGTAAAAAGA CAGCACGCCG AACTGGCG CGGCGTGCTG GACAGGAAGATTACA xylE 4222329 - 4220854 - | D-xylose transporter TERM 5493 4221399 - 4221413 + g 74 -7.8 -4.11484 | overlap 4221400 ACAGCGCGATATCGG TGCTGG CCC CCAGCG TTTTGAACACTTCCG TERM 5494 4221800 - 4221782 - G 81 -6.8 -4.65747 | GAACGGGCAATAAAA TAGTTCAC GCA GTAAACTA AAAGTTGCCCGAAAA TERM 5495 4222166 - 4222156 - G 72 -6.8 -4.18018 | GCTGGCTACGCAAAA CCCT AAC AGGG AATTGGCAGCGGATT TERM 5496 4222628 - 4222609 - R 100 -9.2 -5.15634 | overlap 4222610 GATTGGACGAAAAAA TGGCGCTC CGTG GAGCGCCG AATAACAGTCACAAG TERM 5497 4222627 - 4222610 - R 100 -12.7 -3.68658 | overlap 4222609 ATTGGACGAAAAAAT GGCGCTC CGTG GAGCGCC GAATAACAGTCACAA malG 4223608 - 4222718 - | maltose transporter subunit ; membrane component of ABC superfamily malF 4225165 - 4223621 - | maltose transporter subunit ; membrane component of ABC superfamily TERM 5498 4224658 - 4224643 - G 72 -10.4 -3.28712 | opp_overlap 4224632 GGTTTTGCGTGATAA CGCGCA GTGT TGCGCG TTCGCCTTCAGGAAG TERM 5499 4225213 - 4225188 - R 76 -9.7 -3.32844 | TTCCTCATTCCAGAA CGGATAAAGCG TTTA CGCTGCATCCG ACAACAACCGCCTGA TERM 5500 4225256 - 4225221 - R 86 -10.4 -3.80733 | opp_overlap 4225223 4225232, overlap 4225222 TGCATCCGACAACAA CCGCCTGATACGACGC TGAC GCGTCTTATCAGGCTT ACATTCGTTTCGGTT TERM 5501 4225255 - 4225222 - R 95 -13.9 -2.88118 | opp_overlap 4225223 4225232, overlap 4225221 GCATCCGACAACAAC CGCCTGATACGACGC TGAC GCGTCTTATCAGGCT TACATTCGTTTCGGT TERM 5502 4225223 - 4225254 + r 100 -17.4 -3.26596 | opp_overlap 4225222 4225221, overlap 4225232 CATCCGACAACAACC GCCTGATACGACGC TGAC GCGTCTTATCAGGC TTACATTCGTTTCGG TERM 5503 4225277 - 4225308 + r 78 -10 -3.55801 | opp_overlap 4225287, overlap 4225278 CGTTTCGGTTTTGTT GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTTCACAGCATTACT TERM 5504 4225278 - 4225307 + r 93 -13.5 -2.73159 | opp_overlap 4225287, overlap 4225277 GTTTCGGTTTTGTTG GCCGGATAAGGCG TTCA CGCCGCATCCGGC ATTTCACAGCATTAC malE 4226509 - 4225319 - | maltose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5505 4227237 - 4227208 - g 74 -2.9 -5.00616 | overlap 4227211 4227220 4227231 GCGGGCGCTAAAAAA GAGGTGATTAACC AGCG AGTTAATCAGGTC GCTGAGGTGCTGCAA malK 4226887 - 4228002 + | fused maltose transport subunit, ATP-binding component of ABC superfamily ; regulatory protein lamB 4228077 - 4229417 + | maltose outer membrane porin (maltoporin) TERM 5506 4229440 - 4229457 + F 100 -12.7 -3.56262 | overlap 4229438 CTAACCTGACCTGAT GAGGGGC GTAA GCCCCTC TGTTTATCGGGTTTG malM 4229515 - 4230456 + | maltose regulon periplasmic protein TERM 5507 4230489 - 4230508 + G 100 -11.4 -5.77632 | opp_overlap 4230488 4230487, overlap 4230480 GATTTTGCAACAACT GGTGCGTC TTCT GGCGCACC TTTTTTTATCATTTT TERM 5508 4230975 - 4230961 - g 80 -5.6 -4.91109 | opp_overlap 4230964, overlap 4230963 4230971 CTGGCATTACAAAAA CTGGGT AAG ACCCCG TTGGGGCGCTACCTG ubiC 4230469 - 4231131 + | chorismate pyruvate lyase (modular protein) TERM 5509 4231454 - 4231464 + G 71 -3.2 -4.78107 | TGTTTGTGGTGTTGG TGCT GCT GGCA TTTTTGCTGGTACTG ubiA 4231144 - 4232016 + | p-hydroxybenzoate octaprenyltransferase TERM 5510 4232065 - 4232031 - T 93 -12.5 -3.17194 | gap 1, opp_overlap 4232031 4232033 4232040, overlap 4232040 ATTTTGTTAATTTAA TAA-AAAAAACCGGTC ACTT GACCGGTTTTTTATTA TCTTGATTTACTCGC TERM 5511 4232031 - 4232065 + T 95 -12.5 -3.35849 | gap 1, opp_overlap 4232031 4232040, overlap 4232033 4232040 ATTTTGTTAATTTAA TAA-AAAAAACCGGTC ACTT GACCGGTTTTTTATTA TCTTGATTTACTCGC TERM 5512 4232033 - 4232062 + T 100 -12.3 -3.80697 | opp_overlap 4232031 4232040, overlap 4232031 4232040 TTTGTTAATTTAATA AAAAAAACCGGTC ACTT GACCGGTTTTTTA TTATCTTGATTTACT TERM 5513 4232055 - 4232040 - T 100 -10.4 -6.11243 | opp_overlap 4232033 4232031 4232040, overlap 4232031 ATTTAATAAAAAAAA CCGGTC ACTT GACCGG TTTTTTATTATCTTG TERM 5514 4232040 - 4232055 + T 100 -10.4 -5.64304 | opp_overlap 4232040 4232031, overlap 4232033 4232031 ATTTAATAAAAAAAA CCGGTC ACTT GACCGG TTTTTTATTATCTTG plsB 4234493 - 4232073 - | glycerol-3-phosphate O-acyltransferase TERM 5515 4233745 - 4233764 + g 77 -6.4 -4.7254 | gap 1 ATCTCTTCCATCAAT GCGACGGCA TTT TGCTG-CGC TTTTTCATGGGAGAT dgkA 4234664 - 4235032 + | diacylglycerol kinase TERM 5516 4235273 - 4235233 - g 82 -11.9 -3.53444 | opp_overlap 4235217 4235215 CGACGCGTGCGGAAA TTGCGCAGCGCTTGGGG TTTCGTT CCCCAAACGCTGCTGAA GAACATCTGAAGGCG lexA 4235142 - 4235750 + | DNA-binding transcriptional repressor of SOS regulon TERM 5517 4235761 - 4235791 + F 100 -9.7 -4.82333 | opp_overlap 4235765, overlap 4235763 4235765 TGTAATCAAGCTTTT AATACCGCGATGC ATCAG GCATCGCGGTCTG TTTTTCACTTCTTCT TERM 5518 4235763 - 4235789 + F 100 -12.3 -4.01369 | opp_overlap 4235765, overlap 4235761 4235765 TAATCAAGCTTTTAA TACCGCGATGC ATCAG GCATCGCGGTC TGTTTTTCACTTCTT TERM 5519 4235787 - 4235765 - f 100 -14.9 -3.04501 | opp_overlap 4235763 4235761 4235765 ATCAAGCTTTTAATA CCGCGATGC ATCAG GCATCGCGG TCTGTTTTTCACTTC TERM 5520 4235765 - 4235787 + F 100 -14.9 -3.57648 | opp_overlap 4235765, overlap 4235763 4235761 ATCAAGCTTTTAATA CCGCGATGC ATCAG GCATCGCGG TCTGTTTTTCACTTC dinF 4235823 - 4237148 + | DNA-damage-inducible SOS response protein yjbJ 4237280 - 4237489 + | putative stress response protein zur 4238055 - 4237540 - | DNA-binding transcriptional repressor, Zn(II)-binding TERM 5521 4237810 - 4237822 + g 71 -9.1 -3.49475 | GAGTACATAGCTGTT GGTGG ATT CCACC TTATGTACAAATCCC TERM 5522 4238738 - 4238758 + G 74 -9.7 -3.53012 | GTTTATCATCCACGC CCGTAAAGC CTG GCTTTCCGG TTTAAGCCCGAAAGA TERM 5523 4238789 - 4238777 - g 71 -2.6 -4.88405 | AAGCCCGAAAGAAAA CAGG GAGAT CCCG CCACTTGATTATCCT yjbN 4238220 - 4239215 + | tRNA-dihydrouridine synthase A TERM 5524 4239246 - 4239269 + F 100 -13.1 -5.0065 | opp_overlap 4239243 4239240 TAGTCAAATTCACCA CGCCCTGCG TTAACT CGCGGGGCG TTTTGTTTATAAATC yjbO 4239350 - 4239592 + | phage shock protein G TERM 5525 4239754 - 4239724 - T 86 -5.6 -5.27477 | gap 2, opp_overlap 4239724 4239726 4239727 4239728, overlap 4239728 AGCCGAACTAAAAAA GAAA--GGGCTTCC CAGGT GGAAGCCCAATTTC TTTCTACAATACTCA TERM 5526 4239726 - 4239750 + T 73 -5.6 -4.56367 | opp_overlap 4239724 4239728, overlap 4239724 4239727 4239728 CCGAACTAAAAAAGA AAGGGCTTCC CAGGT GGAAGCCCAA TTTCTTTCTACAATA TERM 5527 4239727 - 4239749 + T 71 -9.1 -3.33097 | opp_overlap 4239724 4239728, overlap 4239726 4239724 4239728 CGAACTAAAAAAGAA AGGGCTTCC CAGGT GGAAGCCCA ATTTCTTTCTACAAT TERM 5528 4239728 - 4239748 + T 88 -12.6 -2.59135 | opp_overlap 4239724 4239728, overlap 4239727 4239726 4239724 GAACTAAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC AATTTCTTTCTACAA TERM 5529 4239748 - 4239728 - T 100 -12.6 -5.12785 | opp_overlap 4239728 4239727 4239726 4239724, overlap 4239724 GAACTAAAAAAGAAA GGGCTTCC CAGGT GGAAGCCC AATTTCTTTCTACAA qor 4240750 - 4239767 - | quinone oxidoreductase, NADPH-dependent TERM 5530 4240051 - 4240041 - G 70 -5.4 -4.30809 | GAAGAGTTACCAAAA CTGA CCA TCAG ACCACGACGTTGCAG TERM 5531 4240209 - 4240219 + g 72 -4.6 -4.64766 | GCTCCTGCTTTTAAC GCGC TCT GTGC TTTTTGCGCTGTACC TERM 5532 4240654 - 4240698 + g 74 -10.2 -3.55622 | overlap 4240654 TGGCTTTGTTTTCTA CC-TGGATTTCATTCTCTGCCG GAT CGGTAG-GAGTGAACTCCACGG TTTGCAGAACTTCCG TERM 5533 4241184 - 4241212 + H 74 -9.7 -3.17325 | opp_overlap 4241183 4241182, overlap 4241183 4241180 4241187 4241189 CGGGGACGTTAAATG CTGTAGCGAGAAA CTG TTTCTCGCTATAC TCTCTTGTCCCCCAT TERM 5534 4241187 - 4241209 + H 93 -13.6 -2.78526 | opp_overlap 4241183 4241182, overlap 4241184 4241183 4241180 4241189 GGACGTTAAATGCTG TAGCGAGAAA CTG TTTCTCGCTA TACTCTCTTGTCCCC TERM 5535 4241189 - 4241207 + H 86 -11.8 -2.93633 | opp_overlap 4241183 4241182, overlap 4241187 4241184 4241183 4241180 ACGTTAAATGCTGTA GCGAGAAA CTG TTTCTCGC TATACTCTCTTGTCC TERM 5536 4241598 - 4241588 - g 77 -3.2 -5.055 | TGAACTGTCAAAAAA CACC CCA AGTG CGGCGAACATCAGCG TERM 5537 4241925 - 4241905 - g 100 -4.5 -5.80364 | opp_overlap 4241905 4241904, overlap 4241907 ATCTGAACAAAAAAA CCGCTGGCC TGC AGCCGTCGG ATTTGATCATTGTTG dnaB 4241253 - 4242668 + | replicative DNA helicase TERM 5538 4242699 - 4242669 - T 75 -8.3 -3.75738 | opp_overlap 4242666 4242669, overlap 4242671 TACGACGATGAATAA CATTGAGGCCAGC TAAAC ACTGGCCTCAAAA ATTATTCTGCCGGGC TERM 5539 4242697 - 4242671 - T 100 -13.1 -3.45742 | opp_overlap 4242669 4242666, overlap 4242669 CGACGATGAATAACA TTGAGGCCAGC TAAAC ACTGGCCTCAA AAATTATTCTGCCGG TERM 5540 4242711 - 4242724 + T 75 -2.3 -5.41143 | AAAAATTATTCTGCC GGGCT TTCA ATCCC TTTTTTTAGCCACTC EFER_4142 4243321 - 4242701 - | hypothetical protein TERM 5541 4242836 - 4242848 + g 74 -3.3 -4.91109 | CGCCATTAGCGCTTC GTCCT GCC AGGCC TTTTTATCATCAACG TERM 5542 4243853 - 4243834 - g 70 -4.2 -4.62783 | opp_overlap 4243834 GAGCCAGTGTAAAAA TGTCCGCC AGCC GGTGAACA TTGTCAGTCACTTCG TERM 5543 4243960 - 4243976 + G 73 -3.6 -4.77165 | GGGGCAACGCTCAAT TGCGGC ATCAG GCGGCA TTTTGTTATGGCCGC alr 4243388 - 4244467 + | alanine racemase 1, PLP-binding, biosynthetic TERM 5544 4244509 - 4244529 + G 76 -9 -3.71873 | CTTATTCAGAAATCG CCGCGTGT CTGGC ATACGCGG TTTCCGTCTGGCTGG EFER_4144 4244490 - 4245044 + | putative transporter TERM 5545 4245532 - 4245549 + G 75 -5.6 -4.63486 | CCGCTACATGTTGGC CTACGA CGTATA TCGTAG TTTTGTTCACCGGAT EFER_4145 4245020 - 4246054 + | putative transcriptional regulator tyrB 4246130 - 4247323 + | tyrosine aminotransferase, tyrosine-repressible, PLP-dependent TERM 5546 4247334 - 4247356 + F 86 -12 -3.14132 | TGTAATTGGATTCAG CAGGCGGG TATCTCT CCCGCCTG TTCCTGACACCAGCC TERM 5547 4247519 - 4247507 - f 71 -3.4 -4.93296 | CCATCAGGAGAAAAA CATG GAGAA CATG ACCTCGCCCGGCACG TERM 5548 4248186 - 4248168 - f 74 -6.7 -4.39426 | gap 1 GATACGCTGACAAAA CGCC-TGC GTGC GCAAGGCG TAGAGGAAATGGTCA sucB 4250268 - 4251422 + | dihydrolipoamide succinyltransferase (E2 component) EFER_4150 4251434 - 4252852 + | putative dihydrolipoyl dehydrogenase, E3 component (lpd-like) sucC 4252874 - 4254043 + | Succinyl-CoA synthetase beta chain (SCS-beta) TERM 5549 4254200 - 4254212 + G 71 -2.6 -4.88407 | GGCGGGCAACTGCAT CTGG ATCGC CCGG TTTTTGATTCAATGA sucD 4254056 - 4254928 + | Succinyl-CoA synthetase alpha chain (SCS-alpha) TERM 5550 4254947 - 4254963 + F 100 -9.4 -5.77988 | ATAAATCTATCTCAA GGGAGC ATATC GCTCCC TTTTTTTATCTGTGT TERM 5551 4255094 - 4255112 + F 95 -3.1 -5.93252 | opp_overlap 4255084 AAAGATGGCATAGCT CCTGC AATAGCCAG GCAGG TTTTTTATTTTTCAC EFER_4153 4255134 - 4256639 + | putative membrane protein; putative transporter EFER_4154 4256513 - 4257724 + | Putative malate/L-lactate dehydrogenases dctD 4259071 - 4257713 - | C4-dicarboxylate transport transcriptional regulatory protein EFER_4156 4260884 - 4259061 - | putative C4-dicarboxylate transport sensor protein (dctB-like) TERM 5552 4260237 - 4260248 + g 70 -5.8 -4.19238 | TTGCAGCGTTCTCAT TCGC CATG GCGA TTTTGAACTTAAAAA TERM 5553 4260803 - 4260790 - G 81 -4.5 -5.09426 | CGCAAGTGCAAAAAA GCGAT TGAA ACCGC TAACATGATAAGAAA TERM 5554 4261435 - 4261420 - g 86 -4 -5.40072 | GGCGTGGCAAAAAAA CCTTCT CGCC AGAAAG CGAAGATTATCTGAA aphA 4261161 - 4261874 + | acid phosphatase/phosphotransferase, class B, non-specific TERM 5555 4261875 - 4261909 + F 91 -6.5 -5.52384 | gap 2, opp_overlap 4261879, overlap 4261878 AATTCAGAATACTGA CAG-A-GCGGGAGAGCG TGA TGCTCTCCCGAATGCTG TTTTTTTAATCACAC TERM 5556 4261903 - 4261879 - f 83 -11.4 -2.95894 | opp_overlap 4261878 4261875 CAGAATACTGACAGA GCGGGAGAGC GTGAT GCTCTCCCGA ATGCTGTTTTTTTAA yjbQ 4261985 - 4262401 + | hypothetical protein TERM 5557 4262573 - 4262559 - g 74 -7.8 -4.07568 | overlap 4262560 4262562 CCGTTTCGCTGAAAA CCAGCC CGG AGCTGG CTGAGCTGCTACGAC yjbR 4262405 - 4262761 + | hypothetical protein TERM 5558 4262770 - 4262788 + T 90 -11.7 -3.66178 | opp_overlap 4262770 ACTCTGAAAGAAAAA GGCCGCT CAGAA AGCGGCC TTTGCGATTACAGCA TERM 5559 4262788 - 4262770 - T 100 -12.4 -5.27938 | opp_overlap 4262770 ACTCTGAAAGAAAAA GGCCGCTC AGA AAGCGGCC TTTGCGATTACAGCA uvrA 4265618 - 4262796 - | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC ssb 4265872 - 4266408 + | Single-stranded DNA-binding protein TERM 5560 4266500 - 4266478 - T 100 -13.5 -5.28176 | opp_overlap 4266481 GCCAGCCATAAAAAA GAAGCCTCC GTTAT GGAGGCTTC TACATATCAGGTCAT TERM 5561 4266481 - 4266497 + T 76 -10.1 -3.39505 | opp_overlap 4266478 AGCCATAAAAAAGAA GCCTCCG TTA TGGAGGC TTCTACATATCAGGT yjcB 4266839 - 4266507 - | conserved hypothetical protein; putative inner membrane protein soxS 4267355 - 4267032 - | DNA-binding transcriptional dual regulator TERM 5562 4267253 - 4267265 + g 74 -3.3 -5.00616 | GCTGCAAATACCACT TCGAG TAA CCCGA TTTTTTAGCGACCAC TERM 5563 4267510 - 4267527 + G 78 -5.6 -4.82901 | overlap 4267506 AAAACGTAGTGGTGT TGCAGT TTCAGC ACTGCA TTTTTATGAAAGCAA soxR 4267442 - 4267906 + | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing TERM 5564 4267927 - 4267903 - f 100 -14.4 -4.35461 | opp_overlap 4267903 GGAAGAGGAGCAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5565 4267903 - 4267927 + F 100 -14.4 -4.4572 | opp_overlap 4267903 GGAAGAGGAGCAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTCCGGTCTT TERM 5566 4268103 - 4268120 + F 86 -7 -5.00616 | opp_overlap 4268103 4268102, overlap 4268094 4268091 TTTTAGCCGCAAAAT TTGCGC TATCTT GCGCAA TTTTTTGCCGCAACG TERM 5567 4268653 - 4268641 - g 78 -10.5 -3.54459 | opp_overlap 4268644 GGAATGCTGGGTAAA GCGGG CTT CCCGC CAGCAGCCGTTTTCG TERM 5568 4268857 - 4268881 + G 70 -6.4 -4.21275 | gap 1, overlap 4268860 CTGTTTACGGTAATT TCC-GCCACGG GTAT CCGTAGCTGGA TTTTACGTAACTTAC yjcD 4268485 - 4269834 + | putative permease TERM 5569 4269862 - 4269881 + F 100 -12.8 -4.51238 | opp_overlap 4269862 ACAGAAATCCGAAAA CGGGCGGC TTTT GCTGCCCG TTTCTATTTTCTGCG TERM 5570 4269881 - 4269862 - f 100 -10.6 -4.26792 | opp_overlap 4269862 ACAGAAATCCGAAAA CGGGCGGC TTTT GCTGCCCG TTTCTATTTTCTGCG TERM 5571 4270143 - 4270156 + G 75 -6.7 -4.36063 | TGGCCTGCATGTGGA GTTCG ATCC CGAAC TTTTCCTGGTGTTAT TERM 5572 4270264 - 4270292 + G 77 -6.7 -4.52047 | GGCCTGGCACTTGCG CTGGTACTGGTCA CTG TGGTCGGTATCGG TTTTCTCATCTACTG TERM 5573 4271305 - 4271293 - g 70 -6.9 -4.02051 | CAGCAACTGAAAGAA GAGCG TAT CGCCC GCGCAGCGACTGCAG yjcE 4269991 - 4271637 + | putative cation/proton antiporter TERM 5574 4271646 - 4271677 + T 100 -11.7 -4.7497 | gap 2, opp_overlap 4271639 TCAATAAATTTAATC TGCCGGAATGGGCGT TAAT ACGCCC-T-CCGGCA TTTTTAATCAGTAGG phnA 4272036 - 4271701 - | hypothetical protein TERM 5575 4272094 - 4272078 - H 72 -6.5 -4.27686 | opp_overlap 4272087 CAAAAGCACCTAAAA TGGGGCA GAT TGCCGCA AAAGGCCGCAATTAT TERM 5576 4273195 - 4273183 - g 77 -3.4 -5.03314 | CTCACCTGCAAAAAA TGCT GAGAG AGCA ACTGGCGCGAGCATC EFER_4168 4272450 - 4274750 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 5577 4275516 - 4275532 + G 75 -11.5 -3.06696 | overlap 4275526 TTGGCAAAACGTTGC GTCGGGG ATG CCCCGGC TCTGTTCCGCCGGGC EFER_4169 4274740 - 4275582 + | hypothetical protein TERM 5578 4276098 - 4276112 + G 81 -7 -4.70772 | overlap 4276100 TTCCCTTTCTGATTC GACCGC TTG GCGGAC TTTTCTTCGGTATGT TERM 5579 4276872 - 4276888 + G 73 -3.6 -4.78981 | overlap 4276873 GTATTGCGCTGTTTG TGCTGG CGATT CCGGCG TTTATTTTGATTAAT TERM 5580 4277295 - 4277283 - g 74 -6.3 -4.48072 | ATATTGAGCAGAAAA TCGAT GAT ATCGA TCTCGAAATTGCCGA proP 4275863 - 4277365 + | proline/glycine betaine transporter TERM 5581 4277416 - 4277441 + T 89 -12.7 -2.78384 | gap 1 TCTCCAGGATGCATA CTCTCCTCCAGT TCA AC-GGAGGAGAG TGTCATGAAAAACCG basS 4278612 - 4277470 - | sensory histidine kinase in two-component regulatory system with BasR TERM 5582 4278287 - 4278303 + g 70 -3.5 -4.59773 | overlap 4278289 GCCAGGTTATCTGCC GTGCGGG CAT CCAGCTC TTTTTGCAACTCAGC basR 4279298 - 4278609 - | DNA-binding response regulator in two-component regulatory system with BasS TERM 5583 4278663 - 4278649 - G 72 -7 -4.26589 | opp_overlap 4278648 4278649 4278650, overlap 4278642 4278650 AGCATATAGCCAAAA CCGCGC ACG GTGCGG ATTCGCTCCTTGCCG eptA 4280920 - 4279277 - | putative metal dependent hydrolase TERM 5584 4281000 - 4280967 - R 100 -18.5 -4.34402 | opp_overlap 4280976 4280991 CTTTTCAGAGTAAAA TTAAGCCAACCTTAA GATC TTAAGGTTGGCTTAA AGACAGCTTTCAATA adiY 4281915 - 4281025 - | DNA-binding transcriptional activator TERM 5585 4281422 - 4281435 + g 72 -4.5 -4.68506 | ACAGTGAATAACAGT GAGCG GGTA CGTTC TTTTTCAACTTCGTT TERM 5586 4281665 - 4281687 + g 75 -7 -4.35524 | opp_overlap 4281665 ATATTATTATCACAA GCGATTAACG CCA TGTTATTCGC TTTTAAATTTACAGG TERM 5587 4281992 - 4281974 - R 100 -8.8 -5.82316 | overlap 4281975 ATCAGGCAAAAAAAA GCGCGG GGTGGGA CCGCGC AAAGAGGTATGACGT TERM 5588 4281993 - 4281975 - R 71 -6.6 -4.07763 | overlap 4281974 TCAGGCAAAAAAAAG CGCGGGGT GGG ACCGCGCA AAGAGGTATGACGTG TERM 5589 4282285 - 4282311 + r 83 -10.9 -3.44229 | overlap 4282286 AAGTTTTACCGGCGA CTGACTGCACC GCTAA GGTGCAGTCAC TTCTGGTGCTCAGGT TERM 5590 4282286 - 4282310 + r 100 -14.4 -2.66216 | overlap 4282285 AGTTTTACCGGCGAC TGACTGCACC GCTAA GGTGCAGTCA CTTCTGGTGCTCAGG yjdF 4282947 - 4282321 - | conserved hypothetical protein; putative inner membrane protein fumB 4284716 - 4283070 - | anaerobic class I fumarate hydratase (fumarase B) TERM 5591 4283690 - 4283705 + g 72 -4.7 -4.66163 | GTGGAATGTACTGGC CTGGA TTGTGT TCCAG TTTTTCGATCCAGAT TERM 5592 4284051 - 4284070 + g 75 -7.2 -4.36914 | gap 1 GTACGGCGGGCAGGC TGCAGTACC GAG GGTAC-GCA TTTTCTCAACGAGGA TERM 5593 4284071 - 4284087 + g 73 -3.7 -4.81249 | overlap 4284072 TACCGAGGGTACGCA TTTTCTC AAC GAGGAAG TTTTTCAGTTTGCCG TERM 5594 4284786 - 4284756 - R 85 -7.5 -4.8048 | gap 1, opp_overlap 4284754, overlap 4284759 CTGTTATACGAAAAA TGACGTGCCGCGTG GTGA CGAGCGGCACG-CA GAGTGTTTTATAAAA TERM 5595 4284784 - 4284759 - R 78 -10.3 -3.30658 | opp_overlap 4284754, overlap 4284756 TTATACGAAAAATGA CGTGCCGCGTG GTGA CGAGCGGCACG CAGAGTGTTTTATAA TERM 5596 4284816 - 4284804 - R 75 -3.3 -5.24129 | GTGTTTTATAAAAAA CCGTA CAT TGCGG CGAAGATCCAGCCAA dcuB 4286134 - 4284794 - | C4-dicarboxylate antiporter TERM 5597 4286649 - 4286609 - R 77 -8.4 -3.9578 | gap 1 ATATACGCTAAATAA TTCAAGTTGCAGGAAC-GC AGTC GCAGCACATGCAACTTGAA GGATGACGAGTATGC dcuR 4287418 - 4286696 - | DNA-binding response regulator in two-component regulatory system with DcuS dcuS 4289046 - 4287415 - | sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration TERM 5598 4288063 - 4288073 + g 75 -6.8 -4.42386 | ACGCTGCATCAACTG CCGA ACT TCGG TTTTATCCCTGAACG EFER_4180 4289230 - 4289081 - | hypothetical protein dmsA 4289538 - 4291964 + | anaerobic dimethyl sulfoxide reductase chain A precursor (DMSO reductase) EFER_4182 4291978 - 4292604 + | putative anaerobic reductase chain B (DMSO reductase iron-sulfur subunit) EFER_4183 4292597 - 4293373 + | putative anaerobic reductase, subunit C TERM 5599 4293379 - 4293406 + GF 71 -9.2 -2.91322 | gap 1, opp_overlap 4293374, overlap 4293377 4293380 4293401 CCCTATGTAACCTGT GA-GTGGCCGG TGTCTGC CCGGCCACCTC TGCTTTCAGGAGTGT TERM 5600 4293565 - 4293541 - gf 83 -11.3 -3.02649 | opp_overlap 4293539 4293536 ATTGGATGAGATATA CGCCTGGCGCG ATC CCCGCCAGGTG GCTGAATTATGCTCT EFER_4184 4293377 - 4294024 + | putative twin-argninine leader-binding protein for anaerobic dehydrogenase EFER_4185 4293877 - 4294551 + | putative ferredoxin TERM 5601 4295110 - 4295082 - T 86 -11.8 -2.91593 | opp_overlap 4295088, overlap 4295088 CATGGGTCCAGAAAG CAAAAACCCGCC TTGTG GGCGGGTTTTCA GGAATTAGTGGTGCC TERM 5602 4295104 - 4295088 - T 100 -10.8 -5.04601 | opp_overlap 4295088, overlap 4295082 TCCAGAAAGCAAAAA CCCGCC TTGTG GGCGGG TTTTCAGGAATTAGT TERM 5603 4295088 - 4295104 + T 100 -11.5 -4.11751 | opp_overlap 4295088 4295082 TCCAGAAAGCAAAAA CCCGCCT TGT GGGCGGG TTTTCAGGAATTAGT TERM 5604 4295152 - 4295168 + T 76 -10.9 -2.62616 | opp_overlap 4295151 4295149 4295146 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4296231 - 4295656 - | putative transcriptional regulator dipZ 4297962 - 4296268 - | fused thiol:disulfide interchange protein: activator of DsbC ; conserved hypothetical protein TERM 5605 4297596 - 4297586 - G 79 -2.4 -5.18726 | GGTGGATAACAAAAA CCCG CCT CGGC GCAGCCCTGATAAGT TERM 5606 4297870 - 4297856 - G 81 -7.1 -4.59424 | AAATCGAAAGCAAAA GCCTG ATCAG CAGGC ACAAATTGTGAACGT cutA 4298282 - 4297938 - | divalent-cation tolerance protein CutA (C-type cytochrome biogenesis protein cycY) TERM 5607 4298361 - 4298384 + r 74 -9.4 -3.27298 | opp_overlap 4298363, overlap 4298362 AGTCGGCGGGAAAGA AAGCGGGGCG TGAA CGCCCCGCGA TTGGTCATTACAGCA TERM 5608 4298362 - 4298383 + r 90 -12.9 -2.56164 | opp_overlap 4298363, overlap 4298361 GTCGGCGGGAAAGAA AGCGGGGCG TGAA CGCCCCGCG ATTGGTCATTACAGC TERM 5609 4298382 - 4298363 - R 100 -16.4 -4.41348 | opp_overlap 4298362 4298361 TCGGCGGGAAAGAAA GCGGGGCG TGAA CGCCCCGC GATTGGTCATTACAG dcuA 4299693 - 4298392 - | C4-dicarboxylate antiporter TERM 5610 4299765 - 4299784 + r 100 -12.2 -4.77036 | opp_overlap 4299765 ACCTTTAAATAAAAA GGCACGTT ATTA AACGTGCC TTTTTGGTCCTACAC TERM 5611 4299784 - 4299765 - R 100 -12.2 -5.27938 | opp_overlap 4299765 ACCTTTAAATAAAAA GGCACGTT ATTA AACGTGCC TTTTTGGTCCTACAC aspA 4301243 - 4299807 - | aspartate ammonia-lyase TERM 5612 4300573 - 4300593 + g 81 -6.1 -4.82333 | overlap 4300575 TTAACTTCCAGCAGT AGTTCAGCG GTA CGCTGAATG TTTTTAACTTCTTCT TERM 5613 4300575 - 4300591 + g 88 -10.9 -4.01369 | overlap 4300573 AACTTCCAGCAGTAG TTCAGCG GTA CGCTGAA TGTTTTTAACTTCTT TERM 5614 4300672 - 4300684 + g 74 -7.7 -4.13282 | overlap 4300663 ACTGCGTCCTGCAGC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 5615 4301107 - 4301122 + g 71 -2.6 -4.92757 | gap 1, opp_overlap 4301107, overlap 4301102 ATCCCGCGGACAAAC TCAG-GA ATA TCACTGA TTTTGTTGTTGCTAA fxsA 4301580 - 4302056 + | inner membrane protein yjeH 4303328 - 4302072 - | transporter TERM 5616 4303202 - 4303190 - G 77 -6.9 -4.56314 | opp_overlap 4303194, overlap 4303191 CTAAGATAATCAAAA CGGGC CAC GCCCA CAGGCTGGTATTGCC TERM 5617 4303293 - 4303307 + g 70 -7.1 -4.10744 | opp_overlap 4303283 TAGCAGGCCGATGCC CTGGG CCAGC CCCAG TTCTTGTTTGAGTCC groS 4303604 - 4303897 + | Cpn10 chaperonin GroES, small subunit of GroESL TERM 5618 4304897 - 4304874 - g 72 -4.4 -4.60041 | overlap 4304875 4304876 4304888 ATGGAGCTGGAAAAA GCGACCCTGG AAGA CCTGGGTCAG GCTAAACGTGTTGTA TERM 5619 4304952 - 4304924 - g 76 -9.5 -3.7642 | overlap 4304922 TGTAATCAACAAAGA CACCACCACCATC ATC GATGGCGTGGGTG AAGAAGCTGCAATCC groL 4303941 - 4305587 + | Cpn60 chaperonin GroEL, large subunit of GroESL TERM 5620 4305617 - 4305640 + F 100 -11 -5.50723 | opp_overlap 4305617 GCAGAAATAAACAAA CCCTCAGGCA GAAA TGTCTGGGGG TTTTTCTTTTAGTCA TERM 5621 4305640 - 4305617 - f 82 -6.6 -4.83246 | opp_overlap 4305617 GCAGAAATAAACAAA CCCTCAGGCA GAAA TGTCTGGGGG TTTTTCTTTTAGTCA yjeI 4305722 - 4306075 + | hypothetical protein TERM 5622 4306092 - 4306113 + T 100 -13.1 -3.35912 | opp_overlap 4306092 4306096, overlap 4306096 TAATGTGAGAGATGA TGAACCCCA TCGC TGGGGTTCA TTGGTATATCTGCTA TERM 5623 4306113 - 4306092 - T 91 -13.1 -2.70275 | opp_overlap 4306092 4306096, overlap 4306096 TAATGTGAGAGATGA TGAACCCCA TCGC TGGGGTTCA TTGGTATATCTGCTA EFER_4197 4306995 - 4306129 - | conserved hypothetical protein; putative chaperone TERM 5624 4306809 - 4306824 + g 70 -4.7 -4.57837 | AGTTCTGTCGCTCAT CAGCA TTTATC TGCTG TTTTTGCCAGAGTCT TERM 5625 4307293 - 4307319 + r 77 -10.8 -2.78934 | opp_overlap 4307294, overlap 4307292 TGCAGAAACCATGTA AGCCCGATAAGC ATA GCGTATCGGGCA ATTTCGCGTGTGTCA TERM 5626 4307318 - 4307294 - R 100 -14.3 -3.17798 | opp_overlap 4307293 4307292 GCAGAAACCATGTAA GCCCGATAAGC ATA GCGTATCGGGC AATTTCGCGTGTGTC yjeK 4308398 - 4307370 - | putative lysine aminomutase efp 4308440 - 4309006 + | Elongation factor EF-P TERM 5627 4309011 - 4309042 + F 100 -13 -3.84406 | opp_overlap 4309010, overlap 4309015 GCGTGAAGTAATACG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCTGGTCAGAG TERM 5628 4309015 - 4309038 + F 100 -14.6 -2.6952 | opp_overlap 4309010, overlap 4309011 GAAGTAATACGGTTG TGGTGCGGCC TGCA GGCTGCACCA TCACTTATTCTGGTC ecnA 4309058 - 4309183 + | entericidin A membrane lipoprotein, antidote entericidin B ecnB 4309294 - 4309440 + | entericidin B membrane lipoprotein TERM 5629 4309444 - 4309475 + F 100 -8 -5.26316 | opp_overlap 4309448, overlap 4309448 GCGCAGCAATAAGCA ATAACGGTACGACA GGTG TGTCGTGCCGTTTG TTTTTTCTGCGATAG TERM 5630 4309471 - 4309448 - f 88 -11 -3.90559 | opp_overlap 4309444 4309448 AGCAATAAGCAATAA CGGTACGACA GGTG TGTCGTGCCG TTTGTTTTTTCTGCG TERM 5631 4309448 - 4309471 + F 100 -13.2 -5.13354 | opp_overlap 4309448, overlap 4309444 AGCAATAAGCAATAA CGGTACGACA GGTG TGTCGTGCCG TTTGTTTTTTCTGCG TERM 5632 4309575 - 4309549 - g 73 -11.7 -2.60194 | gap 1, opp_overlap 4309547 4309549, overlap 4309548 ATTCGTTCAACCAAC CGC-TTTGCAGG ACGA CCTGCAAACGCG TCTTTTCACCGGGGA TERM 5633 4309549 - 4309575 + G 85 -11.7 -3.63744 | gap 1, opp_overlap 4309549 4309548, overlap 4309547 ATTCGTTCAACCAAC CGC-TTTGCAGG ACGA CCTGCAAACGCG TCTTTTCACCGGGGA sugE 4309466 - 4309933 + | large cation (quaternary ammonium) efflux transporter blc 4310463 - 4309930 - | outer membrane lipoprotein (lipocalin) TERM 5634 4310541 - 4310524 - R 100 -11.3 -4.46581 | overlap 4310515 GAAAAGCGGAGAAAA GGTCCGA AAAT TCGGACC CGATGAAATTTTACT ampC 4311685 - 4310552 - | beta-lactamase/D-alanine carboxypeptidase TERM 5635 4311706 - 4311730 + r 100 -12.7 -3.75629 | opp_overlap 4311708, overlap 4311707 CTGGTTTCCATACAA AACGGCCCGCC ATA GGCGGGCCGGA TTTACATTGGCGATG TERM 5636 4311707 - 4311729 + r 100 -16.2 -2.85056 | opp_overlap 4311708, overlap 4311706 TGGTTTCCATACAAA ACGGCCCGCC ATA GGCGGGCCGG ATTTACATTGGCGAT TERM 5637 4311728 - 4311708 - R 100 -19.7 -4.52589 | opp_overlap 4311707 4311706 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCG GATTTACATTGGCGA frdD 4312107 - 4311748 - | fumarate reductase (anaerobic), membrane anchor subunit frdC 4312513 - 4312118 - | fumarate reductase (anaerobic), membrane anchor subunit frdB 4313258 - 4312524 - | fumarate reductase (anaerobic), Fe-S subunit frdA 4315059 - 4313251 - | fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit TERM 5638 4314062 - 4314087 + g 79 -2.6 -5.24129 | gap 1, overlap 4314064 GCTTTCGCCAGTTCG CAG-ATGAACG GCAGA CGTTCATGCAG TTTTTTCTCGCCGAG TERM 5639 4314151 - 4314123 - G 70 -7.3 -4.04206 | opp_overlap 4314123 4314125 4314126 4314128 4314147, overlap 4314126 4314128 GCAGGTCGAGATAAA CTACATCGCCACG CGG CGTGGAGATGGTG TTGCCTTTACGCCAT TERM 5640 4314126 - 4314148 + g 72 -12 -2.51888 | opp_overlap 4314123 4314126 4314128, overlap 4314125 4314123 4314128 4314147 GGTCGAGATAAACTA CATCGCCACG CGG CGTGGAGATG GTGTTGCCTTTACGC TERM 5641 4314148 - 4314126 - G 75 -12 -3.06418 | opp_overlap 4314126 4314125 4314123 4314128 4314147, overlap 4314123 4314128 GGTCGAGATAAACTA CATCGCCACG CGG CGTGGAGATG GTGTTGCCTTTACGC poxA 4315385 - 4316362 + | lysyl-tRNA synthetase TERM 5642 4316380 - 4316423 + F 77 -6.2 -4.67038 | gap 1, opp_overlap 4316384 4316386 4316388 4316393, overlap 4316381 4316384 4316393 CCGAAAATCACTTCA T-TAAGAGACAAAATGGCGTT TTG AACGCCATTTTGTAGCATATA TTTTCATTTTCGCGC TERM 5643 4316381 - 4316421 + F 100 -11.3 -3.94465 | opp_overlap 4316384 4316386 4316388 4316393, overlap 4316380 4316384 4316393 CGAAAATCACTTCAT TAAGAGACAAAATGGCGTT TTG AACGCCATTTTGTAGCATA TATTTTCATTTTCGC TERM 5644 4316384 - 4316418 + F 91 -13 -2.71018 | opp_overlap 4316384 4316386 4316388 4316393, overlap 4316381 4316380 4316393 AAATCACTTCATTAA GAGACAAAATGGCGTT TTG AACGCCATTTTGTAGC ATATATTTTCATTTT TERM 5645 4316418 - 4316384 - f 95 -13 -3.17956 | opp_overlap 4316384 4316381 4316380 4316393, overlap 4316386 4316388 4316393 AAATCACTTCATTAA GAGACAAAATGGCGTT TTG AACGCCATTTTGTAGC ATATATTTTCATTTT TERM 5646 4316416 - 4316386 - f 100 -14.2 -3.1478 | opp_overlap 4316384 4316381 4316380 4316393, overlap 4316384 4316388 4316393 ATCACTTCATTAAGA GACAAAATGGCGTT TTG AACGCCATTTTGTA GCATATATTTTCATT TERM 5647 4316414 - 4316388 - f 100 -16.8 -3.13371 | opp_overlap 4316384 4316381 4316380 4316393, overlap 4316386 4316384 4316393 CACTTCATTAAGAGA CAAAATGGCGTT TTG AACGCCATTTTG TAGCATATATTTTCA TERM 5648 4316409 - 4316393 - f 100 -10.9 -4.6955 | opp_overlap 4316384 4316381 4316380 4316393, overlap 4316388 4316386 4316384 CATTAAGAGACAAAA TGGCGTT TTG AACGCCA TTTTGTAGCATATAT TERM 5649 4316393 - 4316409 + F 100 -10.9 -4.4195 | opp_overlap 4316393 4316388 4316386 4316384, overlap 4316384 4316381 4316380 CATTAAGAGACAAAA TGGCGTT TTG AACGCCA TTTTGTAGCATATAT TERM 5650 4316621 - 4316600 - gf 100 -4.4 -5.5604 | opp_overlap 4316600 4316602 4316617, overlap 4316602 TCAATCAATAAAAAA GATGAGCC TTATGG GGCTCATA CTTATGATCTTTACA TERM 5651 4316619 - 4316602 - gf 75 -7 -4.40357 | opp_overlap 4316602 4316600 4316617, overlap 4316600 AATCAATAAAAAAGA TGAGCC TTATGG GGCTCA TACTTATGATCTTTA TERM 5652 4317051 - 4317085 + GF 71 -8.7 -3.37523 | opp_overlap 4317047, overlap 4317049 ATTAATAAAATCGCA CGTATTACGGCGGTA GGCGG TATTGCCGTAATGTG TCTTAATTTAGTATT TERM 5653 4317306 - 4317296 - gf 86 -4 -5.4477 | opp_overlap 4317296 4317299 AAACCCGGAAAAAAA CTTT GCC AAAG GTATTGTGTTTGCCG yjeM 4316580 - 4318082 + | putative transporter TERM 5654 4318075 - 4318061 - gf 77 -2.7 -5.04385 | opp_overlap 4318069, overlap 4318062 CAGAGTGGCAAAAAA TCCGC AGTGG GCGGT GGAATAACCCGATGC EFER_4211 4317980 - 4318183 + | hypothetical protein TERM 5655 4318446 - 4318464 + G 79 -2.3 -5.26918 | overlap 4318448 CGCACTGGCTATTTT CGGCTAC TGGTT GTGGCAG TTTTTTCTGCGCTAT yjeO 4318180 - 4318494 + | conserved hypothetical protein; putative inner membrane protein yjeP 4321848 - 4318525 - | putative mechanosensitive channel TERM 5656 4319031 - 4319052 + g 72 -5.7 -4.56775 | opp_overlap 4319009 GATCGCGGATCGTTA CCGTATCGC CAAT GCGAATCGG TTTTTCGAACAGGAT TERM 5657 4319965 - 4319955 - G 75 -4.6 -4.80453 | overlap 4319956 TGAGGATAAAACAAA GCCG TCC CAGC GAACCGGAGAATTCA psd 4322838 - 4321870 - | phosphatidylserine decarboxylase rsgA 4323987 - 4322935 - | ribosome small subunit-dependent GTPase A TERM 5658 4323459 - 4323499 + g 74 -11.1 -3.19509 | overlap 4323448 4323457 4323455 4323453 4323460 TGCGGTAGATATCCA TCTGCTCGTTGACGAATGC CAT GCCTTCGTCGTCCAGCAGG TCTATCTTGTTGAGC TERM 5659 4323460 - 4323498 + g 76 -12.4 -2.51223 | overlap 4323448 4323459 4323457 4323455 4323453 GCGGTAGATATCCAT CTGCTCGTTGACGAATGC CAT GCCTTCGTCGTCCAGCAG GTCTATCTTGTTGAG orn 4324082 - 4324627 + | oligoribonuclease TERM 5660 4324659 - 4324635 - T 77 -8.5 -3.92592 | overlap 4324636 AGCTGTAATACGAAA TCGGGGCGT GGTGATT ACGCCCCGG CAAATGATTACTGTG TERM 5661 4324658 - 4324636 - T 86 -12 -2.95073 | overlap 4324635 GCTGTAATACGAAAT CGGGGCGT GGTGATT ACGCCCCG GCAAATGATTACTGT artJ 4325482 - 4324667 - | arginine-binding periplasmic protein 2 precursor TERM 5662 4325733 - 4325717 - RH 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5663 4325845 - 4325829 - RH 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5664 4325957 - 4325941 - RH 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 5665 4326180 - 4326202 + rH 74 -4.9 -4.78753 | opp_overlap 4326174, overlap 4326182 4326198 AATTAAGATCTCGTT TTGTCGAGT CGATC ACTTGACGA TTTTATTCGTCTTGA yjeS 4327399 - 4326260 - | putative Fe-S electron transport protein yjeF 4327398 - 4328945 + | putative carbohydrate kinase yjeE 4328917 - 4329378 + | ATPase with strong ADP affinity TERM 5666 4329721 - 4329711 - g 72 -6.8 -4.1899 | CGATCTCACCGAAAA CGGT AAA ACCG AAGCGGTGAAGCGGC amiB 4329397 - 4330734 + | N-acetylmuramoyl-l-alanine amidase II TERM 5667 4332019 - 4332001 - g 81 -5.9 -4.78661 | ATGCAAAAACCAAAA GCACCTG AACCG CAGGAGC CAGCGCTTGCGGCGA TERM 5668 4332262 - 4332250 - g 74 -3.3 -4.91109 | TCGGCATTAGAAAAA GCGCA GTC TGCCC TGGCGGAATTGGGTA mutL 4330744 - 4332591 + | methyl-directed mismatch repair protein miaA 4332584 - 4333534 + | delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase TERM 5669 4333648 - 4333675 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4333647 4333644, overlap 4333641 AATCTTTACAAGATC CGTTCCTGAACGC ACT GCGT-CGGGAACG TGTTCCAGTTTCTAT TERM 5670 4333851 - 4333841 - g 72 -8.2 -3.78778 | overlap 4333842 TCATCACAGTAACAA CGCC GGT GGCG GTACCAGCAGTAACT hfq 4333620 - 4333928 + | HF-I, host factor for RNA phage Q beta replication TERM 5671 4333910 - 4333940 + F 82 -4.8 -5.40072 | gap 1, opp_overlap 4333917 TTCCGCGCAACAGGA CAGCGAAGAAACC GAATAA GGTTTCAT-GCTG TTTTTTTACACGGGG TERM 5672 4334897 - 4334885 - g 71 -3.3 -4.81212 | GCGAGTACAAGAAAA CATCG AAG CGGTG AATACGGTTCTTGAA TERM 5673 4335048 - 4335012 - g 90 -9.5 -4.4768 | overlap 4335008 GACGAAGAGAACAAA CCGATCCGTGTCTG-GC TTTCT GCGCAGAC-CGGAGCGG GGATACCACAGCTTT hflX 4334004 - 4335284 + | putative GTPase TERM 5674 4335687 - 4335676 - g 70 -7.2 -4.03811 | opp_overlap 4335686 TACACCATTAAAGAA GCCG AACG CGGC GTGGTAACACGCTTT TERM 5675 4336382 - 4336369 - g 75 -5.3 -4.69664 | GAGACGATGGAAAAA GTGTT GGGC AACAC CCGCAAAGTGCTGGT TERM 5676 4336601 - 4336582 - g 81 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC TAAC GCGCAGCG TAACGACTACCAGCG hflK 4335370 - 4336629 + | modulator for HflB protease specific for phage lambda cII repressor hflC 4336632 - 4337636 + | modulator for HflB protease specific for phage lambda cII repressor TERM 5677 4337693 - 4337665 - f 85 -9.6 -4.19678 | gap 1, opp_overlap 4337666, overlap 4337666 GTACAGGTCAATAAA GCCACCG-CATCC TCAG GGATGCCGGTGGT TTTCTTTTTCTATAA TERM 5678 4337666 - 4337692 + F 100 -13.1 -5.38839 | gap 1, opp_overlap 4337665 4337666 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGCCGGTGG TTTTCTTTTTCTATA TERM 5679 4337692 - 4337666 - f 95 -13.1 -3.11325 | gap 1, opp_overlap 4337666, overlap 4337665 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGCCGGTGG TTTTCTTTTTCTATA yjeT 4337718 - 4337915 + | conserved hypothetical protein; putative inner membrane protein TERM 5680 4338389 - 4338379 - g 74 -8.2 -3.86194 | overlap 4338366 4338380 AACGCGCGTGAGAAA GCGC GCG GCGC GAAAGCGATCGGCAC TERM 5681 4338534 - 4338502 - g 72 -5.6 -4.56775 | opp_overlap 4338502 4338524, overlap 4338525 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4338019 - 4339317 + | adenylosuccinate synthetase TERM 5682 4339372 - 4339406 + F 84 -11.6 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGGTTAGC CATTAT GCTA-TCCGACACAG TGTTAAATCCTCGCT TERM 5683 4339721 - 4339707 - g 74 -2.7 -5.00616 | overlap 4339708 TGTTCGTGGAAAAAA TGGCG GCATT CGCCT GGGGAAACCGGCGAG nsrR 4339522 - 4339947 + | DNA-binding transcriptional regulator TERM 5684 4340109 - 4340085 - g 75 -5.7 -4.71482 | gap 1, overlap 4340086 ACCAAACGTGAAAAA CCGGCCAGCC GTGATG AGCTGGC-GG TAGAACTACACATTG TERM 5685 4342251 - 4342236 - g 86 -6 -5.09895 | overlap 4342238 GATGCAGGCAAAAAA GGCGGC AAGC GTCGCC AGGTCGGTAAAAAGG TERM 5686 4342324 - 4342313 - g 70 -7.2 -4.08806 | CGAGAAAAAAACGAA GCCG AAAG CGGC GAAGAAAGACGCGAG rnr 4339986 - 4342427 + | exoribonuclease R, RNase R TERM 5687 4342430 - 4342458 + F 73 -8.2 -3.58726 | opp_overlap 4342418, overlap 4342431 AGTGGCAGAGTGATC ATTACCCTCTTC AAACA GAAGAGGGTGAA TTATCTGTAGGCCGG TERM 5688 4342431 - 4342457 + F 81 -11.7 -2.75022 | opp_overlap 4342418, overlap 4342430 GTGGCAGAGTGATCA TTACCCTCTTC AAACA GAAGAGGGTGA ATTATCTGTAGGCCG TERM 5689 4342637 - 4342662 + G 76 -11.1 -3.31144 | overlap 4342638 TCTGTTGCCGCTGAT TCACGCCCTTG AGTC CCAGGGCGTGG TTATCCAGCTGGCAA TERM 5690 4342638 - 4342661 + G 76 -12.4 -2.58544 | overlap 4342637 CTGTTGCCGCTGATT CACGCCCTTG AGTC CCAGGGCGTG GTTATCCAGCTGGCA TERM 5691 4342732 - 4342702 - g 74 -6 -4.4648 | opp_overlap 4342709 ATCTCGACGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC CCGTGTGAAGCCTGG rlmB 4342518 - 4343249 + | 23S rRNA (Gm2251)-methyltransferase TERM 5692 4343287 - 4343270 - f 74 -9.9 -3.08314 | opp_overlap 4343270, overlap 4343269 CGGAATTGTGAAAAG CCATCCA AAAT TGGATGG TTTTTTTTTATCTAT TERM 5693 4343270 - 4343287 + F 100 -9.9 -6.32216 | opp_overlap 4343270 4343269 CGGAATTGTGAAAAG CCATCCA AAAT TGGATGG TTTTTTTTTATCTAT yjfI 4343376 - 4343771 + | hypothetical protein TERM 5694 4344169 - 4344159 - g 77 -6.8 -4.57073 | GATGGTGTGGAAAAA GCAG TAT CTGC TACAGCTCTGCGGAT yjfJ 4343790 - 4344488 + | putative transcriptional regulator effector protein TERM 5695 4344494 - 4344520 + F 82 -10.2 -3.71124 | opp_overlap 4344493 4344489, overlap 4344495 GGGTGAGTAATTTAT TTGCCAGCCT TTATACC AGGCTGGCAG TTATATATTCGTCAT TERM 5696 4344495 - 4344519 + F 81 -11.5 -2.81951 | opp_overlap 4344493 4344489, overlap 4344494 GGTGAGTAATTTATT TGCCAGCCT TTATACC AGGCTGGCA GTTATATATTCGTCA yjfK 4344654 - 4345313 + | hypothetical protein yjfL 4345331 - 4345729 + | conserved hypothetical protein; putative inner membrane protein TERM 5697 4345825 - 4345784 - g 72 -8.7 -3.78449 | gap 1 AATAATACACTCAAA CATGCCACC-GCCAGCCG TATCAAT CGGCCAGCAGGTGCCACG TCTGCCAAACGAACA EFER_4238 4345733 - 4346386 + | conserved hypothetical protein; putative YjfM TERM 5698 4346982 - 4346994 + G 72 -4.7 -4.62441 | CGCACAACAGGCAGG CCAGG AAT CCCGG TTTATTTATATCGAA yjfC 4346389 - 4347552 + | putative synthetase/amidase TERM 5699 4347617 - 4347588 - f 74 -9.3 -3.39895 | opp_overlap 4347588 TCTGTCATGAATGAA TGGCAGTGACCAT ACTT AAGGTTACTGCCA TTGATGGAGGGAGAC TERM 5700 4347588 - 4347617 + F 84 -11.5 -3.14132 | opp_overlap 4347588 TCTGTCATGAATGAA TGGCAGTGACCAT ACTT AAGGTTACTGCCA TTGATGGAGGGAGAC TERM 5701 4347786 - 4347755 - g 80 -11.6 -3.29511 | overlap 4347758 4347783 TGCAGCCTGGGATAA CGAGTTGCTTGCCA GTAT TGGCCAGCAACTGG GGACCGCAGAATCTC TERM 5702 4347783 - 4347758 - g 73 -11.9 -2.82742 | overlap 4347755 AGCCTGGGATAACGA GTTGCTTGCCA GTAT TGGCCAGCAAC TGGGGACCGCAGAAT TERM 5703 4347983 - 4347995 + G 78 -10.5 -3.53444 | overlap 4347979 CGGATCATTTGTGGT GCGGG CTG CCCGC TTCATTATTCACGCC TERM 5704 4348796 - 4348782 - g 70 -7.2 -4.11394 | ACTCCAGCGGCAAAA TTTGCA GTG TGCAAA GCAGGAATACCTTTT TERM 5705 4349232 - 4349261 + G 77 -7.2 -4.45068 | gap 1 CAGAATGATTTGTTG CTACGGGC-GACG GGAGG CGTTTGCCTGTAG TTTATTGTTCAGCAT aidB 4347618 - 4349261 + | isovaleryl CoA dehydrogenase TERM 5706 4349348 - 4349379 + T 100 -13 -3.65046 | opp_overlap 4349358 AACGTTGCCTTTGTT TGCCGGATAAGGTG CTTT CACCACATCCGGCA TTCTTGACCTGGCAA yjfN 4349724 - 4349404 - | hypothetical protein yjfO 4350279 - 4349908 - | hypothetical protein TERM 5707 4351023 - 4351002 - g 79 -2.3 -5.31456 | gap 1 GGAAGTGACAAAAAA GCTATC-ACA CCT TGCAGACAGC CCCCTGTTGCTATGG EFER_4243 4350463 - 4351212 + | putative esterase yjfP ulaR 4351964 - 4351209 - | DNA-binding transcriptional dual regulator TERM 5708 4352065 - 4352020 - R 100 -12.7 -4.15543 | gap 1, overlap 4352022 GAAATAGCCTGAAAA TACTACGCCGGATGGCG-CG AAGAACG CGACTCCATCCGGCATAGCA CGCTGATTACAAGAA TERM 5709 4352063 - 4352022 - R 100 -13.1 -3.66658 | gap 1, overlap 4352020 AATAGCCTGAAAATA CTACGCCGGATGGCG-CG AAGAACG CGACTCCATCCGGCATAG CACGCTGATTACAAG ulaG 4353136 - 4352072 - | putative L-ascorbate 6-phosphate lactonase ulaA 4353488 - 4354885 + | L-ascorbate-specific enzyme IIC component of PTS ulaB 4354901 - 4355206 + | L-ascorbate-specific enzyme IIB component of PTS ulaC 4355216 - 4355680 + | L-ascorbate-specific enzyme IIA component of PTS ulaD 4355694 - 4356344 + | 3-keto-L-gulonate 6-phosphate decarboxylase TERM 5710 4356413 - 4356393 - g 100 -12.5 -4.7497 | GGCATCTACGAAAAA GCGCTCCCC GCC GGGGAGTGC TGGCTGGAACGGCTG ulaE 4356354 - 4357208 + | L-xylulose 5-phosphate 3-epimerase TERM 5711 4357226 - 4357216 - g 75 -6.8 -4.3208 | CGGCATAATGCAAAA GCTG AAA CAGC AGGTATTTGAAGCCA ulaF 4357208 - 4357894 + | L-ribulose 5-phosphate 4-epimerase TERM 5712 4357982 - 4357965 - T 100 -12.7 -5.40072 | CGTTTTTCAAAAAAA GCCCCCT GAGA AGGGGGC AAAGCAAACTATGGC yjfY 4358298 - 4358023 - | hypothetical protein TERM 5713 4358101 - 4358113 + g 82 -9.1 -4.25437 | CACGTGGTAGTACGT TGCGC CCT GCGCA TTTGTCTCTTCATTT rpsF 4358626 - 4359021 + | 30S ribosomal subunit protein S6 priB 4359028 - 4359342 + | primosomal protein N rpsR 4359347 - 4359574 + | 30S ribosomal subunit protein S18 rplI 4359616 - 4360065 + | 50S ribosomal subunit protein L9 TERM 5714 4360086 - 4360114 + T 100 -16.1 -3.21934 | opp_overlap 4360091, overlap 4360091 TATTCAACGAGACGT AAAAACGCCGACC AGT GGTCGGCGTTTTG CTTTTATAGCGAGCA TERM 5715 4360109 - 4360091 - T 100 -16 -4.72333 | opp_overlap 4360086 4360091 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTTATAGC TERM 5716 4360091 - 4360109 + T 100 -16 -4.73108 | opp_overlap 4360091, overlap 4360086 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTTATAGC EFER_4257 4361148 - 4360177 - | putative dicarboxylate-binding periplasmic protein TERM 5717 4360516 - 4360531 + g 72 -6.1 -4.41548 | overlap 4360506 GTGACGCATGGTGGT CAGCG CCATCA CGCTG TTTTCTGCCATATCG TERM 5718 4361189 - 4361172 - R 100 -12.7 -3.6761 | overlap 4361170 CTTTTCTAATAAATA TGGCGGC AGGT GCCGCCA GTGAATGCGCATCAG EFER_4258 4362502 - 4361201 - | putative ATP-independent transporter subunit EFER_4259 4363045 - 4362545 - | putative ATP-independent transporter subunit EFER_4260 4365123 - 4363042 - | putative oxidoreductase EFER_4261 4366661 - 4365120 - | putative CoA transferase TERM 5719 4366628 - 4366645 + g 72 -7.7 -3.9644 | gap 1 CATCCTGAATTTGCG CCGCC-AG TGT CTCGGCGG TTGTTATCTTACGCA EFER_4262 4367447 - 4366671 - | putative acyl-CoA hydratase TERM 5720 4367335 - 4367353 + g 72 -6 -4.34737 | opp_overlap 4367335 ATTTCATTTAAATAA TGGTCGAG AGA TTCGATCA TTTCTTCATTAATAG EFER_4263 4368299 - 4367457 - | putative enzyme EFER_4264 4369100 - 4368309 - | putative dehydrogenase TERM 5721 4369838 - 4369825 - g 72 -6.7 -4.22375 | ATATTATTTAATAAA CCAGT ACAC ACTGG GGATGGTATATCACA TERM 5722 4369883 - 4369922 + G 82 -9.3 -4.25104 | gap 1, opp_overlap 4369908 CCTGAGGCTTTGGAA GCCAGACGCAGGGTGATC AAAGA GACCATCCTGAG-CTGGC TTTTGGTGAACCCGG ytfA 4369223 - 4369948 + | putative transcriptional regulator ytfB 4370611 - 4369949 - | putative cell envelope opacity-associated protein TERM 5723 4370645 - 4370661 + H 78 -4.3 -5.1244 | overlap 4370647 CTAACGCTATGATGT CCGTGGT ATT ACCGCTG TTTTTGTATTCATGC fklB 4370797 - 4371417 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) cycA 4371725 - 4373137 + | D-alanine/D-serine/glycine transporter TERM 5724 4373150 - 4373174 + T 100 -16.5 -4.19817 | TAACGGCTTTCTCAT GCTGGATGGCG CAA TGCCATCCAGC TTTTAGATCACTCAC ytfE 4373844 - 4373182 - | regulator of cell morphogenesis and cell wall metabolism ytfF 4374926 - 4373952 - | conserved hypothetical protein; putative inner membrane protein TERM 5725 4374981 - 4374948 - R 74 -6.7 -4.30987 | overlap 4374950 ATCTGTCAGAAGAAA TATTCAGGGAACAAC CGTA GTCGTTCCCCGCATC CCGTCATTATCAGAG TERM 5726 4374979 - 4374950 - R 81 -9.3 -3.75817 | overlap 4374948 CTGTCAGAAGAAATA TTCAGGGAACAAC CGTA GTCGTTCCCCGCA TCCCGTCATTATCAG ytfG 4375886 - 4375026 - | NAD(P)H:quinone oxidoreductase ytfH 4375975 - 4376355 + | putative transcriptional regulator TERM 5727 4376382 - 4376358 - T 74 -9.9 -3.21395 | overlap 4376356 ACGTGCGGCATAACA GCCGGATGCGC TGC GCTTATCCGGC CTACGGTTCATGACT TERM 5728 4376430 - 4376412 - T 74 -9.6 -3.30124 | opp_overlap 4376418 4376424 4376425, overlap 4376424 TTGTAGGGCGGATAA GATGCGAC AGC ATCGCATC CGCCAATAAATGCCG TERM 5729 4376424 - 4376452 + T 81 -11 -3.35467 | opp_overlap 4376412 4376424, overlap 4376418 4376425 TAAGATGCGACAGCA TCGCATCCGCCA ATAAA TGCCGGATGCGG TTGATGATTTGTAGG TERM 5730 4376425 - 4376451 + T 88 -12.3 -2.60798 | opp_overlap 4376412 4376424, overlap 4376424 4376418 AAGATGCGACAGCAT CGCATCCGCCA ATAAA TGCCGGATGCG GTTGATGATTTGTAG cpdB 4378427 - 4376484 - | 2':3'-cyclic-nucleotide 2'-phosphodiesterase TERM 5731 4376764 - 4376749 - G 78 -7.6 -4.4078 | TCCGGTGAAGCAAAA GCGATA TGGC TATCGC CCGTACCTGCAAATT TERM 5732 4377427 - 4377443 + g 85 -2.9 -5.45652 | TCGACCAGATTACTG TCTTCCG CCG CGAGAGA TTTTTTATTGGCGAT cysQ 4378616 - 4379356 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 5733 4379364 - 4379390 + T 76 -10.9 -2.5007 | opp_overlap 4379362 4379361 4379357 4379365, overlap 4379363 TTTACTAAGTAATTT ATGCAGCAGGT CCATT ACCTGCTGCAC CTCTTGCTGAGTTAA TERM 5734 4379389 - 4379365 - T 100 -14.4 -2.61216 | opp_overlap 4379364 4379363, overlap 4379362 4379361 4379357 TTACTAAGTAATTTA TGCAGCAGGT CCATT ACCTGCTGCA CCTCTTGCTGAGTTA ytfJ 4379903 - 4379346 - | putative transcriptional regulator TERM 5735 4379729 - 4379751 + g 71 -2.7 -4.87665 | gap 1, overlap 4379749 GGACTCGCACTTTTC CTGGTAACTG TGCG CTGTT-CCAG TTTTTATAGCTAAAC TERM 5736 4380123 - 4380107 - H 84 -3.7 -5.55698 | overlap 4380098 CATAAGGTAAAAAAA TTTCTAC AAA GTGGAAA CATTGCGGAGATAGT ytfK 4380228 - 4380434 + | hypothetical protein TERM 5737 4380481 - 4380457 - T 100 -14.3 -3.73647 | opp_overlap 4380453 4380452, overlap 4380459 GCTATGCAGTAATAA GACGGCTCCTG AAT CAGGAGCCGTT GACGTTTGGGGGGTT TERM 5738 4380479 - 4380459 - T 100 -16.9 -3.44998 | opp_overlap 4380453 4380452, overlap 4380457 TATGCAGTAATAAGA CGGCTCCTG AAT CAGGAGCCG TTGACGTTTGGGGGG ytfL 4381838 - 4380495 - | conserved hypothetical protein; putative inner membrane protein EFER_4278 4382091 - 4382501 + | putative enzyme; putative protein PhnB EFER_4279 4382910 - 4382581 - | conserved hypothetical protein YjdP; putative exported protein rpiB 4383427 - 4382978 - | ribose 5-phosphate isomerase B/allose 6-phosphate isomerase TERM 5739 4384251 - 4384273 + G 85 -7 -4.75308 | overlap 4384252 GCGGTTCAAACGCTA TTTGTGCGGA TAT TCAGCACAAG TTTTTACGTATTGGT rpiR 4383788 - 4384678 + | DNA-binding transcriptional repressor TERM 5740 4384706 - 4384683 - f 100 -15.4 -5.26875 | CGCTGAAGTAAAAAA GTAATCCCGC AATC GCGGGATTAC CACTCAACCCTACAC alsB 4384735 - 4385670 + | D-allose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5741 4385709 - 4385682 - f 75 -8.4 -3.88137 | ATAAGTTGTCATAAA CCCCCTTCTGTA GCGT TATGGAAGGGGG CCATTAAAAAGGAAA alsA 4385731 - 4387263 + | fused D-allose transporter subunits of ABC superfamily: ATP-binding components TERM 5742 4387298 - 4387325 + G 85 -3.3 -5.31877 | AAAACCGTTCAACTT CGCGCTGTTCT GGGATA AGTACGGCACG TTTTTTATCCTCGCT TERM 5743 4387658 - 4387671 + G 73 -3.8 -4.7373 | opp_overlap 4387668 GTTTATTATCACTCT TGGC ACAAAC GCCA TTTTTCGTGGCATCA alsC 4387242 - 4388222 + | D-allose transporter subunit ; membrane component of ABC superfamily alsE 4388233 - 4388919 + | allulose-6-phosphate 3-epimerase TERM 5744 4388942 - 4388968 + GF 85 -9.5 -4.18018 | AGCGTGGTGGCGGGC GTGGATATGGG GGCGA CTCATATCCGC TTTTGCCTGCAAACG alsK 4388888 - 4389826 + | D-allose kinase (Allokinase) TERM 5745 4389980 - 4390009 + F 90 -7.2 -5.0925 | opp_overlap 4389982, overlap 4389982 ATTTTCTCAAAATGA CATTCTCGCCTT TATTAT AAGGCGAGGATA TTTTTCATTTTGCCG TERM 5746 4389982 - 4390007 + F 88 -9.8 -4.16392 | opp_overlap 4389982, overlap 4389980 TTTCTCAAAATGACA TTCTCGCCTT TATTAT AAGGCGAGGA TATTTTTCATTTTGC yjcS 4390054 - 4392057 + | putative alkyl sulfatase TERM 5747 4392066 - 4392094 + F 100 -18.9 -5.09895 | opp_overlap 4392061 4392058 4392054, overlap 4392068 AAATTAATTAGCGTA TAGCTTCCGGGGG TGA CCCCCGGAAGCGA TTTTTTCAATAAATA TERM 5748 4392068 - 4392092 + F 100 -21.5 -2.78405 | opp_overlap 4392061 4392058 4392054, overlap 4392066 ATTAATTAGCGTATA GCTTCCGGGGG TGA CCCCCGGAAGC GATTTTTTCAATAAA EFER_4288 4392222 - 4392539 + | hypothetical protein yjcR 4392560 - 4393591 + | membrane fusion protein of efflux pump EFER_4290 4393591 - 4395597 + | Multidrug resistance protein MdtO TERM 5749 4395637 - 4395651 + G 78 -9.2 -3.95073 | TCTGTGGTCTGTTAG GCGGCG CGA CGCTGC TTTCTGGCTGTGCCC TERM 5750 4395745 - 4395720 - g 78 -9.1 -3.86202 | gap 1 CCCGAGCAGATTAAA CTTGCC-GATGA CAT TCACCTGGCAAG CGCCGGTTGGCCACA TERM 5751 4396825 - 4396810 - g 78 -9 -3.86346 | GTACGCGTCTACAAA CGCTGA ATAA TCAGCG AGAAATACAAGCTGA yjcP 4395594 - 4397051 + | outer membrane factor of efflux pump TERM 5752 4397060 - 4397081 + F 83 -11.5 -2.95884 | TAAGTAATTCTCACA CCGCGCGGT GAAT GTCGCGCGG TATCTCACTTCGTCA TERM 5753 4397564 - 4397542 - g 72 -10.6 -3.00128 | opp_overlap 4397545, overlap 4397539 CATTAAAGAGAAGTA TGGCCCGGAT GCC ATCCAGACCA CCGGGTCTTCGCGTG TERM 5754 4397997 - 4397962 - g 100 -12.1 -4.69053 | gap 1, opp_overlap 4397968 CATTATTGAAGAAAA TCTGTACGACAAAGCG TTCGT CGCTTC-TCGTACAGA AGGCTTTGAAGAGTA TERM 5755 4398078 - 4398057 - g 79 -12.3 -3.06815 | opp_overlap 4398055 AGTCGGTTGAAGATA TCACCGGCG TTAG CGCCAGTGA GATTCGTCAGGCAGC TERM 5756 4398563 - 4398552 - g 75 -7.2 -4.30576 | TCTTTATGACCAAAA CCGC GTCG GCGG CGGATGTCATTTTAC fdhF 4397249 - 4399396 + | formate dehydrogenase-H, selenopolypeptide subunit TERM 5757 4399428 - 4399409 - f 100 -13.6 -3.30635 | opp_overlap 4399409 TAAATCCCTCCACAA CAGCCTCC AGCC GGAGGCTG TTTTTTTTCCATGCA TERM 5758 4399409 - 4399428 + F 100 -13.6 -5.81412 | opp_overlap 4399409 TAAATCCCTCCACAA CAGCCTCC AGCC GGAGGCTG TTTTTTTTCCATGCA yjcO 4399487 - 4400176 + | hypothetical protein gltP 4401746 - 4400250 - | glutamate/aspartate:proton symporter TERM 5759 4400437 - 4400421 - G 70 -6.5 -4.15788 | AACCCCGGCAATAAA CGCCAGA CCT TCCAGCG GGATCCCTACGCTTC TERM 5760 4401527 - 4401544 + g 82 -2.6 -5.36364 | opp_overlap 4401527, overlap 4401521 CCATAGCAATAAGGA TCTGCC AGGCCA GGCTGA TTTTTATATTTTTCA TERM 5761 4401773 - 4401791 + H 78 -2.4 -5.48514 | opp_overlap 4401774, overlap 4401774 CGATAATGATGAATA ACTTTCTG TTA TAGAAAGA TTTTTATTTGTTGCT TERM 5762 4402494 - 4402478 - g 77 -6.5 -4.64676 | opp_overlap 4402478, overlap 4402479 CCATCTGCAAGAAAA CGGCGAT CGC ACCGCCA TCATCTGGGAAGGCG TERM 5763 4402824 - 4402814 - g 90 -6.8 -5.06414 | TCCGCTGAAGAAAAA CGTC GAT GACG CTCTGAAAAATCCGA TERM 5764 4403521 - 4403511 - g 78 -8.2 -4.19817 | opp_overlap 4403518 GCTACCGAGCTAAAA GCCG GTT CGGC GACGCGTCCGTTCTT acs 4402212 - 4404170 + | acetyl-CoA synthetase TERM 5765 4404474 - 4404459 - g 75 -5.4 -4.62783 | overlap 4404460 GAGTTAGTCGAAAAA CGGCAA CGGT TTGCCA CCATCCTGTCGATTA EFER_4297 4404231 - 4404710 + | conserved hypothetical protein YjcH TERM 5766 4404742 - 4404714 - g 72 -6 -4.33105 | gap 1 CAAGCATCATGAAAA GAGTTCTGACGGC GCTT GCCGCCACA-CTC CCTTTCGCAGCTAAC actP 4404707 - 4406356 + | acetate transporter TERM 5767 4406366 - 4406389 + T 100 -16.8 -4.19177 | CATTAATCTCTACCC TTCCCCGGTC GTTT GACCGGGGAA TTTCTCTTCAGGCAT msrA 4407035 - 4406397 - | methionine sulfoxide reductase A TERM 5768 4408560 - 4408571 + G 72 -4.4 -4.63218 | GATCCGTACACTGTA CGAT CGCC ATCG TTTTGTTACGCGCGG ytfM 4407241 - 4408974 + | conserved hypothetical protein; putative outer membrane protein and surface antigen TERM 5769 4409578 - 4409567 - g 70 -5.8 -4.28656 | overlap 4409558 ACCGAAGATTGAAAA TCCG CAGC CGGA TGAAAAACCGCTCGG TERM 5770 4409596 - 4409586 - g 72 -4.6 -4.72986 | opp_overlap 4409587, overlap 4409587 CAGCCGGATGAAAAA CCGC TCG GCGA AACGCTGAAAGATCT TERM 5771 4411102 - 4411063 - g 79 -2.1 -5.19212 | gap 1, overlap 4411064 4411066 ATCAGGAGCAAAAAA TCAGCAT-CGGGCCACAC TGCTG GCTTAACCCGAATGCAGA ACTGTGCGTGCCGCA TERM 5772 4412697 - 4412718 + G 70 -10.9 -2.70315 | overlap 4412695 4412694 CTATATCTGGAAGCC GTGTCTGGT GTAG ACCAGGCAC TGGATTTGCTCTATC ytfN 4408971 - 4412747 + | hypothetical protein TERM 5773 4412827 - 4412813 - g 72 -11.4 -2.52834 | opp_overlap 4412812 4412811, overlap 4412789 4412794 4412812 CACTGGATGACCAAT GCCCAG TTA CTGGGC GATTTCAGTATCGAT ytfP 4412750 - 4413091 + | hypothetical protein TERM 5774 4413099 - 4413123 + F 100 -10.8 -4.38712 | gap 1, opp_overlap 4413097, overlap 4413103 ATAAGTAACCATATG CATACGCCACC TTCG GGTGGCGT-TG TTTTATCCAGCTGCC TERM 5775 4413103 - 4413120 + F 100 -12.7 -4.31397 | opp_overlap 4413097, overlap 4413099 GTAACCATATGCATA CGCCACC TTCG GGTGGCG TTGTTTTATCCAGCT TERM 5776 4413858 - 4413846 - g 85 -3.4 -5.40474 | AGGTGTTGAAAAAAA CGAT GCTAT ATCG GCGCAATGGTATCGA TERM 5777 4414662 - 4414644 - g 70 -5.8 -4.15325 | overlap 4414645 ATATATAGAAAAATA TGCCCCGG AAG CCTGGGCG AGAATGCAAAAGCTT EFER_4303 4413241 - 4414713 + | hypothetical protein TERM 5778 4414775 - 4414804 + T 100 -9.3 -4.59109 | overlap 4414777 CCACCTGCGGGTGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 5779 4414777 - 4414802 + T 100 -16.3 -3.90762 | overlap 4414775 ACCTGCGGGTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG insG 4416114 - 4414786 - | putative IS4 transposase; KpLE2 phage-like element TERM 5780 4416147 - 4416122 - R 100 -13.4 -5.61596 | opp_overlap 4416122 ATGTGCATAAAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 5781 4416122 - 4416147 + r 100 -13.4 -3.61398 | opp_overlap 4416122 ATGTGCATAAAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 5782 4416231 - 4416241 + r 81 -4 -5.31456 | ATTTTTTTGCGAGAC GAAT CGT ATTC TTTTTTGTAACTTCC ppa 4417094 - 4416564 - | inorganic pyrophosphatase TERM 5783 4417153 - 4417166 + H 71 -6.7 -4.22214 | opp_overlap 4417142 4417147 TATAGCCAACTCGCG GCGAA AGTC TTCGC TTGTTTTCGCTCACT TERM 5784 4417568 - 4417557 - g 70 -3.6 -4.67234 | AGTGAAGCCGAAAAA CGCG GTAT CACG TTGAAAATTGCCGAT TERM 5785 4417592 - 4417576 - g 70 -7.3 -4.12188 | GTATCACGTTGAAAA TTGCCGA TGG TCAGCAA AAGCAGGAAAACCAG TERM 5786 4418220 - 4418230 + G 70 -6.8 -4.08767 | CTGACGCCGAATATG GCAG GCC CTGC TTTTGACGCGCTGGA ytfQ 4417404 - 4418360 + | putative sugar transporter subunit: periplasmic-binding component of ABC superfamily TERM 5787 4418392 - 4418425 + F 100 -14.5 -3.30243 | overlap 4418393 4418411 ATGCCGACTTGTACG CCGCCGGATAAGGCG TTTA TGCCGCATCCGGCGG TTGTGCGAGATGCCT ytfR 4418493 - 4419995 + | putative sugar transporter subunit: ATP-binding component of ABC superfamily ytfT 4420009 - 4421031 + | putative sugar transporter subunit: membrane component of ABC superfamily TERM 5788 4421312 - 4421326 + G 72 -7.8 -3.90328 | GTGCTGGTGATGGGC TGTGCC TTC GGCGCA TTTATGGGGCTTCTG TERM 5789 4421902 - 4421912 + G 74 -3.2 -4.96523 | ATGGTGGACGAAAAT TGCC ATC GGTA TTTTGTTATTCATTT yjfF 4421018 - 4422013 + | putative sugar transporter subunit: membrane component of ABC superfamily TERM 5790 4422038 - 4422017 - T 100 -15.9 -3.99374 | GCGCAGGAATAATAA CGCCTCTCC GTGT GGAGAGGCG CAGGAGATTACGCGT fbp 4423044 - 4422046 - | fructose-1,6-bisphosphatase I TERM 5791 4422525 - 4422514 - G 70 -7.2 -4.02108 | CGGATCATAAGTAAA GGCG TGGA CGCC GCAGCCAGTGGTGTA TERM 5792 4422989 - 4423012 + g 81 -9.6 -4.09864 | GCAGTGAGCTCACCG GTAGCATGAG AAAA CTCGTGCTGC TTTTCGACAATAAAT mpl 4423220 - 4424593 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 5793 4424586 - 4424576 - T 79 -8.2 -4.21974 | GGACTAGCGAAGAAA GCGG AAG CCGC GCAGTAATTCGGCCT TERM 5794 4424652 - 4424614 - T 100 -14.7 -2.88544 | gap 1, overlap 4424617 4424628 CCTCAGCCTGAGATA GTATTGCCGGATAAGGCG TTCA CGCCGCATCCGGCAA-AC CATACTCACATCAAC TERM 5795 4424650 - 4424617 - T 100 -17.5 -2.69468 | overlap 4424614 4424628 CAGCCTGAGATAGTA TTGCCGGATAAGGCG TTCA CGCCGCATCCGGCAA ACCATACTCACATCA yjgA 4425227 - 4424676 - | hypothetical protein TERM 5796 4424843 - 4424868 + g 76 -7.5 -4.26189 | CAATGGCGTCATCAC CCTGGTCGATC AGAC GATCGCGCAGG TTTTCCAGTTTATGG pmbA 4425321 - 4426673 + | peptidase required for the maturation and secretion of the antibiotic peptide MccB17 TERM 5797 4426696 - 4426679 - f 100 -10.5 -5.52384 | CGGGCAGTAAAAAAA GGCGCGA CCTG CCGCGCC AAATCTTAATAAGAA TERM 5798 4426862 - 4426849 - g 75 -5.2 -4.58685 | AAAGTGGTCGAAAAA GCCG ATAACG CGGC GCAAGTCAAAGACGC cybC 4426726 - 4427112 + | soluble cytochrome b562 TERM 5799 4427118 - 4427147 + T 72 -9.3 -3.12069 | opp_overlap 4427133, overlap 4427117 GTATCGTTAATTCCT TATTGGGCGGTGA AACG TTACCGCCCAACG CTTTCTTCCCCTTCG EFER_4315 4427255 - 4427109 - | hypothetical protein EFER_4316 4427303 - 4427545 + | Antitoxin RelB EFER_4317 4427457 - 4427831 + | RelE protein; putative cytotoxic translational repressor of toxin-antitoxin stability system nrdG 4428292 - 4427828 - | anaerobic ribonucleotide reductase activating protein TERM 5800 4428379 - 4428338 - gR 74 -10.1 -3.09516 | opp_overlap 4428349 4428350 4428352 4428362, overlap 4428342 4428343 GGCTGTATCAGGCAA TCAACGCCTGATGCGACGC TGTT GCGTCTTATCAGGCCTGGA GCCGTTGCCAAATGT TERM 5801 4428375 - 4428342 - gR 74 -9.5 -3.38316 | opp_overlap 4428349 4428350 4428352 4428362, overlap 4428338 4428343 GTATCAGGCAATCAA CGCCTGATGCGACGC TGTT GCGTCTTATCAGGCC TGGAGCCGTTGCCAA TERM 5802 4428374 - 4428343 - gR 91 -13 -2.62668 | opp_overlap 4428349 4428350 4428352 4428362, overlap 4428342 4428338 TATCAGGCAATCAAC GCCTGATGCGACGC TGTT GCGTCTTATCAGGC CTGGAGCCGTTGCCA TERM 5803 4428396 - 4428427 + Gr 84 -10 -3.90112 | opp_overlap 4428392 4428396 4428406, overlap 4428362 4428397 CCGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAGCGCAGA TERM 5804 4428427 - 4428396 - gR 83 -12.2 -2.64155 | opp_overlap 4428362 4428396 4428397, overlap 4428392 4428406 CCGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAGCGCAGA TERM 5805 4428397 - 4428426 + Gr 100 -13.5 -2.93853 | opp_overlap 4428396 4428392 4428406, overlap 4428362 4428396 CGTTGCCAAATGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTGCTTAGCGCAG EFER_4319 4427945 - 4428436 + | hypothetical protein nrdD 4430588 - 4428450 - | anaerobic ribonucleoside-triphosphate reductase TERM 5806 4429172 - 4429132 - G 74 -10 -3.42283 | gap 2, overlap 4429130 4429164 TAACCCAGCGAAATA GACGCACGACCGTTTTTGAA GAT TTCAGAAACG-TCGT-CGTC AGCATTCAGACGAAC TERM 5807 4429613 - 4429626 + g 82 -8.1 -4.56597 | opp_overlap 4429613 CCAGTTTCGGGAACA CCGCA GTTT TGCGG TTTTTACCCAGGCCC TERM 5808 4429738 - 4429708 - G 70 -5.4 -4.34402 | GTGCCCAGACCAAAA CCAAAGGTCACAAA CGG TGTTTGACCGTTGG CGGTGTGCAGGGTGT TERM 5809 4430279 - 4430306 + g 77 -6.2 -4.67234 | gap 1, opp_overlap 4430276 4430278 4430281, overlap 4430281 TCTGCTCAACCAGAC CACGGATCTCCTG ATT CAGGCGA-CCGCG TTTTTCACGTTCAAT TERM 5810 4431017 - 4431002 - R 75 -10.4 -2.86164 | TCTGTAACCACCAGA CGGCCT CAAA AGGCCG TAAAGTCATGGCACA treC 4432637 - 4430982 - | trehalose-6-P hydrolase TERM 5811 4431093 - 4431107 + g 75 -11.4 -3.1247 | GTTTCCGCGCATTTG CCCTGG CTG CCAGGG TTGGATCTCACGGCT TERM 5812 4431696 - 4431684 - G 72 -7.7 -3.87104 | opp_overlap 4431681 GTTACACCAGAACAA GGCAT TCC ATGCC ACGTTGTGCATTCCT TERM 5813 4431927 - 4431904 - G 79 -10.2 -3.73775 | opp_overlap 4431904, overlap 4431884 CCCACGGTCATTAAA CCGCGAGGCG TAAA CACATCGCGG TTCATCTCATGCAAA treB 4434109 - 4432688 - | fused trehalose(maltose)-specific PTS enzyme: IIB component ; IIC component TERM 5814 4433548 - 4433562 + g 91 -5.6 -5.41143 | opp_overlap 4433521, overlap 4433550 GCACGATACCGAGGA TCGGCG TGC CGCCCA TTTTTTTCACCGCTG TERM 5815 4434188 - 4434175 - R 95 -8.1 -4.92239 | GGAAAAATTTAAAAA CGGGA ACGT TCCCG AAACGCAGCGAAGAT treR 4435175 - 4434228 - | DNA-binding transcriptional repressor EFER_4324 4435759 - 4435298 - | conserved hypothetical protein,homologous to putative transposase TERM 5816 4435806 - 4435778 - R 74 -10.4 -2.70932 | opp_overlap 4435778, overlap 4435780 4435783 TCCCTGGTTGAATCA GATAACCCAGGC GCAAT ACCTGGATTATC TTTCAGTAGAGATTA yjgF 4436205 - 4435819 - | ketoacid-binding protein pyrI 4436738 - 4436277 - | aspartate carbamoyltransferase, regulatory subunit pyrB 4437686 - 4436751 - | aspartate carbamoyltransferase, catalytic subunit TERM 5817 4437734 - 4437717 - R 100 -12.7 -5.75342 | opp_overlap 4437717 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTTGTTTGGATGATC TERM 5818 4437717 - 4437734 + r 100 -12.7 -4.47183 | opp_overlap 4437717 CCTGGGCAAAAAAAA GCCCCTC AATT GAGGGGC TTTGTTTGGATGATC EFER_4328 4438452 - 4437913 - | putative arginine repressor EFER_4329 4439963 - 4438527 - | conserved hypothetical protein; putative membrane protein, putative C4-dicarboxylate transport TERM 5819 4439983 - 4439947 - G 95 -13.8 -3.31263 | opp_overlap 4439944 4439961, overlap 4439934 4439950 ATGTGATCTCCATAA TCACGGGCATACGCCA CTCGT CGACGTATGCCCGTCA GGGTTAGTCGCCGAG TERM 5820 4439980 - 4439950 - G 95 -15.5 -2.83271 | opp_overlap 4439944 4439961, overlap 4439947 TGATCTCCATAATCA CGGGCATACGCCA CTCGT CGACGTATGCCCG TCAGGGTTAGTCGCC arcB 4441018 - 4439987 - | Ornithine carbamoyltransferase, catabolic (OTCase) arcC 4441971 - 4441015 - | Carbamate kinase EFER_4332 4443181 - 4441958 - | Putative arginine deiminase (Arginine dihydrolase) TERM 5821 4442755 - 4442777 + g 71 -3.4 -4.8622 | opp_overlap 4442755 TAATGAAATCATTAA TATCGTGGGT ATC AACCACCATA TTTTTAATTGAGGCG TERM 5822 4443970 - 4443986 + G 72 -4.3 -4.65584 | overlap 4443972 AAGGTAAGCACGCTA TTGACGG CGA CCGTCTG TTTTATCTGATTTCT TERM 5823 4443972 - 4443984 + G 78 -9.1 -3.92324 | overlap 4443970 GGTAAGCACGCTATT GACGG CGA CCGTC TGTTTTATCTGATTT yjgK 4443855 - 4444307 + | hypothetical protein argI 4445374 - 4444352 - | ornithine carbamoyltransferase 1 TERM 5824 4445454 - 4445442 - H 84 -6.3 -4.99043 | GCTTGATAAATAAAA CTTTG TGA CAAAG GTGGAGGCATTGTCA yjgD 4445519 - 4445935 + | hypothetical protein TERM 5825 4445975 - 4445950 - T 80 -9.7 -3.68886 | opp_overlap 4445950 ATTAATGGATTGAAA TGCCCGATAGC TCAC ACTGTCGGGCA TTTTTTTTAGAGATC TERM 5826 4445950 - 4445975 + T 100 -11.2 -5.76949 | opp_overlap 4445950 ATTAATGGATTGAAA TGCCCGATAG CTCACA CTGTCGGGCA TTTTTTTTAGAGATC yjgM 4446497 - 4445982 - | putative acetyltransferase EFER_4338 4446562 - 4447833 + | conserved hypothetical protein; putative inner membrane protein TERM 5827 4447841 - 4447870 + T 100 -13.7 -3.55378 | opp_overlap 4447846, overlap 4447846 TTATCTAAGTGCGTA AAAAAGCCGAAGC GTGT GCTTCGGCTTTTG TCTTTCTGACTGGCT TERM 5828 4447865 - 4447846 - T 100 -13.6 -5.03145 | opp_overlap 4447841 4447846 TAAGTGCGTAAAAAA GCCGAAGC GTGT GCTTCGGC TTTTGTCTTTCTGAC TERM 5829 4447846 - 4447865 + T 100 -13.6 -4.84918 | opp_overlap 4447846, overlap 4447841 TAAGTGCGTAAAAAA GCCGAAGC GTGT GCTTCGGC TTTTGTCTTTCTGAC valS 4450747 - 4447892 - | valyl-tRNA synthetase TERM 5830 4449252 - 4449272 + g 74 -7.5 -4.07568 | overlap 4449254 ACGCTGGTTGGGTGG AACTGACGC AGG GCGTCGGTG TTTTCCGGCCAGCCA TERM 5831 4449254 - 4449270 + g 77 -10.1 -3.63744 | overlap 4449252 GCTGGTTGGGTGGAA CTGACGC AGG GCGTCGG TGTTTTCCGGCCAGC TERM 5832 4450516 - 4450532 + g 72 -4.3 -4.62783 | overlap 4450519 CGGCGTGGTCAGTAC CGACCTG CCA CAGGGTG TTTTTGCCCTGCATG holC 4451190 - 4450747 - | DNA polymerase III, chi subunit EFER_4341 4451672 - 4451256 - | hypothetical protein pepA 4453204 - 4451693 - | aminopeptidase A, a cyteinylglycinase TERM 5833 4451765 - 4451744 - G 77 -11.5 -3.14881 | opp_overlap 4451743 4451742 GAACTGTGCCAGCAA CGCCACCGG GCGA CCGGTTGCG CCTTTCGCCTTACCA TERM 5834 4453500 - 4453548 + G 75 -6.7 -4.386 | overlap 4453503 4453505 ATATCTGGTGCGGGA GACGCTCAAAAGCCAGCTGGCGA TAC TCTTCATCTTGCTTTTGATCTTC TTTTGTCAAAAGTTA TERM 5835 4453503 - 4453545 + G 75 -7 -4.30995 | overlap 4453500 4453505 TCTGGTGCGGGAGAC GCTCAAAAGCCAGCTGGCGA TAC TCTTCATCTTGCTTTTGATC TTCTTTTGTCAAAAG TERM 5836 4453505 - 4453543 + G 72 -8.2 -3.75581 | overlap 4453503 4453500 TGGTGCGGGAGACGC TCAAAAGCCAGCTGGCGA TAC TCTTCATCTTGCTTTTGA TCTTCTTTTGTCAAA TERM 5837 4453932 - 4453942 + G 81 -4.6 -5.09762 | opp_overlap 4453932 CCAACAGGCGACGAA CGGC AGT GCTG TTTTGTTTATTGAAA yjgP 4453471 - 4454571 + | conserved hypothetical protein; putative inner membrane protein TERM 5838 4455259 - 4455225 - g 70 -5.1 -4.30014 | gap 2, overlap 4455232 CTGACCAATCCAAAA CAGATCACCGGCTCACA GAC CGTGAG-CGGC-ACCTG GAAAACCAACCTCAC TERM 5839 4455575 - 4455593 + G 70 -10.2 -3.14132 | overlap 4455587 GCTGGTTTATGGCAT CCCGCCGA TTA TCGGCGCG TTGCTGCCAAGCGCC yjgQ 4454571 - 4455653 + | conserved hypothetical protein; putative inner membrane protein TERM 5840 4455671 - 4455686 + T 91 -10.4 -4.24294 | opp_overlap 4455671 GGACCAATAAATAAA GGGAGC GAAA GCTCCC TTTTGGATCGTTGAT TERM 5841 4455686 - 4455671 - T 100 -10.4 -4.70887 | opp_overlap 4455671 GGACCAATAAATAAA GGGAGC GAAA GCTCCC TTTTGGATCGTTGAT ecfH 4456372 - 4455797 - | conserved hypothetical protein; putative periplasmic or secreted lipoprotein yraO 4456972 - 4456382 - | DnaA initiator-associating factor for replication initiation yraN 4457387 - 4456992 - | hypothetical protein yraM 4459381 - 4457345 - | hypothetical protein TERM 5842 4457749 - 4457738 - GH 70 -7.2 -3.86015 | CATCGGTTTGATAAA GGCG ATTT CGCC CGGCGTTGCCACAAT TERM 5843 4458974 - 4459005 + gH 72 -9.5 -3.08032 | overlap 4458965 4458972 4458976 TGCCTGCCAGTAACG CGCCTGCTGGTTT TGTTCT AAATCGGCAGGTG TCATTTTAGCCAGCA TERM 5844 4459386 - 4459397 + H 88 -3 -5.75945 | GAGGGTACCATAATG TATC CAGT GATA TTTTTTTTACGCAAT TERM 5845 4459841 - 4459858 + G 82 -9.1 -4.27117 | overlap 4459847 GGCATTAAGCGCCGC CGGTCTG CCTT CGGACCG TTTCTGTTATGAAGG yraL 4459446 - 4460309 + | putative methyltransferase TERM 5846 4460356 - 4460342 - T 86 -11.4 -3.33315 | overlap 4460333 4460315 GGAATAGCGCTACAA CGCCTG TAC CAGGCG AGTTAACGACGACAC agaI 4461126 - 4460359 - | galactosamine-6-phosphate isomerase TERM 5847 4460550 - 4460567 + g 72 -4.7 -4.65168 | opp_overlap 4460541 4460537, overlap 4460551 AAGTGATCCCACGAG TCACGGG ACGA CCCGCGG TTTTTAACATCTCAT TERM 5848 4460900 - 4460918 + g 82 -3 -5.24531 | opp_overlap 4460904 GTCAGTTGGCTGACA TCAACCTG CTG CTGGTGGA TTTTTTCTACCAGAT TERM 5849 4461119 - 4461095 - G 79 -10 -3.73072 | opp_overlap 4461094 4461090 4461097 AATTCCTTTAGTAAA GAGGCACCAC CAGAC GCAGTGCCTC GTTCCATTTACAAAA agaD 4461918 - 4461127 - | N-acetylgalactosamine-specific enzyme IID component of PTS TERM 5850 4461376 - 4461412 + g 71 -9.4 -3.51161 | overlap 4461406 4461407 GCCGATTACCGTGAT CCCGAGGATGGTTGCC GAACG GGCAATCATCTGCGAG TTCTCTCGCACTTTA agaC 4462711 - 4461908 - | N-acetylgalactosamine-specific enzyme IIC component of PTS TERM 5851 4462641 - 4462631 - G 81 -6.8 -4.63592 | GCGGAATAAAAATAA GGCT TCC AGCC AAAAATCAATCCCCA agaB 4463226 - 4462750 - | N-acetylgalactosamine-specific enzyme IIB component of PTS TERM 5852 4463364 - 4463335 - R 72 -9.3 -3.14132 | opp_overlap 4463339, overlap 4463339 CTCCTTTGCTATTAA GGCACTCCCCGAT ATTA ATCGGGAAGTACA TTGGGATAAATCATA TERM 5853 4463360 - 4463339 - R 76 -10.9 -2.56596 | opp_overlap 4463339, overlap 4463335 TTTGCTATTAAGGCA CTCCCCGAT ATTA ATCGGGAAG TACATTGGGATAAAT kbaY 4464252 - 4463392 - | tagatose 6-phosphate aldolase 1, kbaY subunit TERM 5854 4463675 - 4463696 + g 70 -5.1 -4.39166 | opp_overlap 4463664 CGAATTTCCGCCAGT CGCTGGAAA TCAA TCTTCAGCG TTTTGCTGTATAAGC agaS 4465419 - 4464265 - | tagatose-6-phosphate ketose/aldose isomerase TERM 5855 4465751 - 4465728 - R 75 -3.2 -5.1502 | gap 1 AGAAAGAAAAAGAAA GGCCTT-AC GGGGGAA GTGAAGGCC CAATAAAGGAGCAAA agaA 4466924 - 4465770 - | N-acetylglucosamine-6-phosphate deacetylase (GlcNAc 6-P deacetylase) TERM 5856 4466488 - 4466501 + g 70 -5.2 -4.30987 | TCGCGAAACAGCTCC GGCG GATGTG CGCC TTTATTCTGCGGCGT EFER_4357 4467334 - 4466900 - | putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component) EFER_4358 4468236 - 4467352 - | putative hexose/hexosamine family PTS permease IID component EFER_4359 4468999 - 4468220 - | putative enzyme IIC component of PTS agaV 4469483 - 4469010 - | N-acetylgalactosamine-specific enzyme IIB component of PTS kbaZ 4470786 - 4469506 - | tagatose 6-phosphate aldolase 1, kbaZ subunit TERM 5857 4470480 - 4470502 + g 71 -9 -3.53444 | overlap 4470471 4470470 TGGCCATTGCCTGAG CGGCAGGCAG ATT CTGCCAGCGG TTTGGCCCCAGATGG agaR 4471034 - 4471843 + | DNA-binding transcriptional dual regulator yhaV 4472362 - 4471898 - | hypothetical protein TERM 5858 4471945 - 4471956 + g 81 -5.8 -4.7416 | TTTCCCAGTCGGCAG GAGG ATGT CCTC TTTTTAACATTTTGC sohA 4472697 - 4472362 - | putative regulator TERM 5859 4472819 - 4472802 - R 89 -7 -5.38549 | opp_overlap 4472802 TTTAAACAATAAAAA CATGGC ACTAAG GCCATG TTTTGCGAGGCGCTT TERM 5860 4472802 - 4472819 + r 71 -7 -4.08064 | opp_overlap 4472802 TTTAAACAATAAAAA CATGGC ACTAAG GCCATG TTTTGCGAGGCGCTT garD 4474417 - 4472846 - | (D)-galactarate dehydrogenase TERM 5861 4475373 - 4475404 + G 71 -2.9 -4.82901 | overlap 4475366 4475383 GGTTGATAACGTCGA TGCCATTGCAGCT ACCGAA GGCGTCGATGGCA TTTTTGTCGGGCCGA garL 4474888 - 4475658 + | alpha-dehydro-beta-deoxy-D-glucarate aldolase garR 4475683 - 4476573 + | tartronate semialdehyde reductase EFER_4368 4476874 - 4476668 - | hypothetical protein TERM 5862 4477119 - 4477146 + r 100 -15 -4.21462 | opp_overlap 4477126, overlap 4477126 CTTCACCTGATTTAT GTAAAAACCCGC TTCG GCGGGTTTTTGC TTTTGAATACTGCCT TERM 5863 4477139 - 4477126 - R 100 -9.5 -4.67353 | opp_overlap 4477119 4477126 TGATTTATGTAAAAA CCCGC TTCG GCGGG TTTTTGCTTTTGAAT TERM 5864 4477126 - 4477139 + r 100 -9.5 -5.10154 | opp_overlap 4477126, overlap 4477119 TGATTTATGTAAAAA CCCGC TTCG GCGGG TTTTTGCTTTTGAAT EFER_4369 4477990 - 4477289 - | putative pirin-related protein YhaK TERM 5865 4478411 - 4478427 + G 74 -2.2 -5.06451 | opp_overlap 4478407 TTGTTACTGAAGCGT TGGTGC CAACC GCAGCA TTTTTTCCACTCATC yhaJ 4478095 - 4478991 + | putative DNA-binding transcriptional regulator TERM 5866 4479027 - 4478989 - T 74 -7.7 -4.07568 | gap 1, opp_overlap 4478996 4479000 4479006, overlap 4478992 4478997 4479000 CTGTTTGCGTCAAAA TAACCGAACAAGCACCTT TTGC AAGGTGCTTGCT-AATTA TTCCTGTTCCAGTTT TERM 5867 4478996 - 4479021 + T 76 -10.5 -2.98778 | opp_overlap 4478992 4478989 4478997 4479000, overlap 4479000 4479006 CGTCAAAATAACCGA ACAAGCACCTT TTGC AAGGTGCTTGC TAATTATTCCTGTTC TERM 5868 4479020 - 4478997 - T 100 -14 -3.37556 | opp_overlap 4478996 4479000 4479006, overlap 4478992 4478989 4479000 GTCAAAATAACCGAA CAAGCACCTT TTGC AAGGTGCTTG CTAATTATTCCTGTT TERM 5869 4479000 - 4479017 + T 76 -9.9 -3.33573 | opp_overlap 4478997 4478992 4478989 4479000, overlap 4478996 4479006 AAAATAACCGAACAA GCACCTT TTGC AAGGTGC TTGCTAATTATTCCT TERM 5870 4479017 - 4479000 - T 84 -9.9 -3.80464 | opp_overlap 4479000 4478996 4479006, overlap 4478997 4478992 4478989 AAAATAACCGAACAA GCACCTT TTGC AAGGTGC TTGCTAATTATTCCT yhaH 4479414 - 4479025 - | conserved hypothetical protein; putative inner membrane protein TERM 5871 4479510 - 4479493 - R 100 -11.3 -5.46657 | CAGTTCAATAAAAAA GGCACCA TTCC TGGTGCC AGTAAACTAACCAAA yqjG 4480503 - 4479517 - | S-transferase TERM 5872 4480546 - 4480528 - R 91 -8.1 -4.84527 | opp_overlap 4480528 TCCAGATAGCAAAAA CGAGGAG TTTTC CCCCTCG TTTTTAGTAGTAAGT TERM 5873 4480528 - 4480546 + r 78 -5.9 -4.77438 | opp_overlap 4480528 TCCAGATAGCAAAAA CGAGGAG TTTTC CCCCTCG TTTTTAGTAGTAAGT yqjF 4480965 - 4480573 - | putative quinol oxidase subunit TERM 5874 4480646 - 4480660 + g 71 -2.8 -4.73388 | AACAGCAGAAAACCG CCTG CAATGGT CAGG TTTTTCATAAACATT TERM 5875 4480987 - 4481000 + r 82 -4.5 -5.41143 | CTCCAGGATGCCTGT CAGGC TAAT GCTTG TTTTTTTCAGCAATG TERM 5876 4481010 - 4481036 + r 90 -11.6 -3.64703 | opp_overlap 4481014 TGCTTGTTTTTTTCA GCAATGACGCGG TAT TCACGTCATTGC TTTCGATGGAGAGAA TERM 5877 4481141 - 4481123 - R 90 -11.7 -3.71848 | TTTTTTGAGTAATAA GGCCGGA AGATA TCCGGCC CTGGAAGAGATTAAC yqjK 4481451 - 4481152 - | hypothetical protein TERM 5878 4481340 - 4481388 + g 72 -8 -3.98378 | opp_overlap 4481338 4481379, overlap 4481366 AGCGGCGATCATATG CGCCTGTGGCCTCCAGCCAGTC TCTGC GACTGGCTGAAAGATCCAGCCG TTGTTGTTGGATCTG yqjE 4481845 - 4481441 - | conserved hypothetical protein; putative inner membrane protein yqjD 4482153 - 4481848 - | hypothetical protein EFER_4377 4482676 - 4482191 - | conserved hypothetical protein; protein yqjC precursor (modular protein) TERM 5879 4482644 - 4482617 - G 76 -10.7 -3.28416 | opp_overlap 4482617 4482620, overlap 4482620 GATGATCCAGACCAA TAAGGCGGTTA AGTTAA CAACCGCCTTA TTAATCATAGTCAGT TERM 5880 4482617 - 4482644 + g 70 -10 -3.23395 | opp_overlap 4482617 4482620, overlap 4482620 GATGATCCAGACCAA TAAGGCGGTT AAGTTAAC AACCGCCTTA TTAATCATAGTCAGT EFER_4378 4483090 - 4482707 - | conserved hypothetical protein; putative exported protein TERM 5881 4482921 - 4482945 + g 89 -12.9 -3.4178 | opp_overlap 4482906 4482921 TTGGCATCCAGATGA TGCCAGACCGA AAA TCCGTCTGGCA TTGTCGTGCCCTGGT TERM 5882 4482945 - 4482921 - G 81 -12.9 -2.64616 | opp_overlap 4482921, overlap 4482906 TTGGCATCCAGATGA TGCCAGACCGA AAA TCCGTCTGGCA TTGTCGTGCCCTGGT yqjA 4483756 - 4483094 - | conserved hypothetical protein; putative inner membrane protein TERM 5883 4483194 - 4483224 + gr 70 -6.1 -4.18197 | opp_overlap 4483195, overlap 4483195 ATCAGACATGACATG AGCTGGTCTTCAT ATTTC AGGAAGACCGGCG TTTTACCTAACAAAT TERM 5884 4483195 - 4483223 + gr 72 -9.6 -3.10597 | opp_overlap 4483195, overlap 4483194 TCAGACATGACATGA GCTGGTCTTCAT ATTTC AGGAAGACCGGC GTTTTACCTAACAAA EFER_4380 4483853 - 4483707 - | hypothetical protein TERM 5885 4484086 - 4484067 - R 76 -10 -3.32914 | opp_overlap 4484067 4484069 ACTGAATCAGACCAA CAGGCGCA TTGC TACGCCTG TTCACTGCACTGTAG exuR 4484878 - 4484102 - | DNA-binding transcriptional repressor TERM 5886 4484976 - 4484958 - R 100 -12.4 -5.2291 | opp_overlap 4484958 ATATCAGAATAAAAA GCCGCCTC TAA AAGGCGGC TTCGTCATTACAGCT TERM 5887 4484958 - 4484976 + r 86 -11.7 -3.27476 | opp_overlap 4484958 ATATCAGAATAAAAA GCCGCCT CTAAA AGGCGGC TTCGTCATTACAGCT exuT 4486313 - 4485003 - | hexuronate transporter TERM 5888 4487966 - 4487987 + G 72 -7.9 -3.95787 | opp_overlap 4487961 GATGACTCAACTGGC GCAGCTCGG TCTG CTGAGCCGC TTTGTCGGTATGCTG uxaC 4486773 - 4488185 + | uronate isomerase TERM 5889 4489306 - 4489295 - g 71 -2.2 -4.96848 | gap 1 GGCTGTACACAAAAA GC-GG GTT CCAGC AAAGTGGTTGACGTG TERM 5890 4489511 - 4489485 - g 77 -8.7 -4.14392 | TGCCAACGGTGAAAA TCGCCACCAAC AGTGA ACTGGCGGCGA AGAAAAAACACTGGA uxaA 4488200 - 4489687 + | altronate hydrolase TERM 5891 4489704 - 4489736 + F 100 -13.6 -4.7629 | opp_overlap 4489708, overlap 4489708 CCTGATATATTTTAA TAAACGGCGTTTCA TTTAT TGAATCGCCGTTTA TTTTTCCATTACTGA TERM 5892 4489732 - 4489708 - f 88 -10 -4.2008 | opp_overlap 4489704 4489708 ATATATTTTAATAAA CGGCGTTTCA TTTAT TGAATCGCCG TTTATTTTTCCATTA TERM 5893 4489708 - 4489732 + F 100 -10 -4.91473 | opp_overlap 4489708, overlap 4489704 ATATATTTTAATAAA CGGCGTTTCA TTTAT TGAATCGCCG TTTATTTTTCCATTA TERM 5894 4490327 - 4490301 - g 100 -12.3 -5.23396 | AACAAGCAAGAAAAA GCCCCTTCCGC TGTAG ACGAAAGGGGC TAAGATTTAGTTACG ygjV 4489764 - 4490330 + | conserved hypothetical protein; putative inner membrane protein sstT 4491578 - 4490334 - | sodium:serine/threonine symporter TERM 5895 4491782 - 4491750 - R 78 -9.7 -3.50326 | opp_overlap 4491752, overlap 4491751 ACTAAATTATTACAA TTGTGCCGGGAAGCG TTG CACTTCCCGGCGCTT TGGTTACTGCATCTG TERM 5896 4491781 - 4491751 - R 91 -13.2 -2.69473 | opp_overlap 4491752, overlap 4491750 CTAAATTATTACAAT TGTGCCGGGAAGCG TTG CACTTCCCGGCGCT TTGGTTACTGCATCT TERM 5897 4491752 - 4491780 + r 100 -16.7 -3.96298 | opp_overlap 4491751 4491750 TAAATTATTACAATT GTGCCGGGAAGCG TTG CACTTCCCGGCGC TTTGGTTACTGCATC alx 4492754 - 4491786 - | conserved hypothetical protein; putative inner membrane protein, part of terminus TERM 5898 4492804 - 4492779 - R 100 -13.3 -5.76633 | opp_overlap 4492778 4492776 4492779 TTACACATAAAAAAA CGGCCAACGTC GGAA GACGTCAGCCG CTGCTTTTTATGCAT TERM 5899 4492821 - 4492842 + r 70 -10.1 -2.52464 | opp_overlap 4492823 TGCTTTTTATGCATA GACCTCGCC TTCC GGCAAGGTC TCACTTACAACAAAA TERM 5900 4492860 - 4492879 + r 84 -10.8 -3.66178 | opp_overlap 4492860 ACTTACAACAAAAAA GGAATACG TCTG CGTATTCC TTTCGGGTTGCCCGG TERM 5901 4492879 - 4492860 - R 100 -10.8 -5.56673 | opp_overlap 4492860 ACTTACAACAAAAAA GGAATACG TCTG CGTATTCC TTTCGGGTTGCCCGG TERM 5902 4493009 - 4492971 - R 71 -6.8 -4.20516 | opp_overlap 4492970 4492977, overlap 4492972 4492974 TTTGCAGGTAACAAA GTATGACAGACCATTCAC CCA GTCAATGGTCTGTTACAT GCCTTTTACACTGCT TERM 5903 4493008 - 4492972 - R 77 -10.3 -3.11988 | opp_overlap 4492970 4492977, overlap 4492971 4492974 TTGCAGGTAACAAAG TATGACAGACCATTCAC CCA GTCAATGGTCTGTTACA TGCCTTTTACACTGC TERM 5904 4493006 - 4492974 - R 79 -10.7 -3.11702 | opp_overlap 4492970 4492977, overlap 4492972 4492971 GCAGGTAACAAAGTA TGACAGACCATTCAC CCA GTCAATGGTCTGTTA CATGCCTTTTACACT TERM 5905 4492977 - 4493003 + r 93 -12.4 -3.1319 | opp_overlap 4492974 4492972 4492971, overlap 4492970 GGTAACAAAGTATGA CAGACCATTCAC CCA GTCAATGGTCTG TTACATGCCTTTTAC ygjR 4494041 - 4493037 - | putative NAD(P)-binding dehydrogenase TERM 5906 4493252 - 4493270 + g 70 -3.8 -4.65895 | opp_overlap 4493252 GCGGCACAAAACACA CTTTCTGG CAT TCAGACAG TTTTTCAATCACCAG TERM 5907 4494722 - 4494705 - R 71 -4.1 -4.83615 | GATCGGCGATAAAAA TTGTCGC TCCT GCCACAA GTAACAGTAAGCAGG ygjP 4495381 - 4494878 - | putative metal dependent hydrolase TERM 5908 4495953 - 4495937 - g 74 -6.5 -4.58283 | GAACTGTTCGAAAAA GTGCTCG GCC CGACCAC CACCACGCTGGCATG ygjO 4495466 - 4496602 + | putative methyltransferase small domain EFER_4395 4496735 - 4497553 + | hypothetical protein; putative membrane protein mdoB 4499928 - 4497637 - | phosphoglycerol transferase I TERM 5909 4498491 - 4498506 + g 70 -6.8 -4.01747 | opp_overlap 4498490 ACAGCCGAATTATAT CTGGCT TCCA GGCCAG TGTTTTCTCTTTGAT TERM 5910 4498788 - 4498764 - G 73 -9.3 -3.62849 | opp_overlap 4498764 4498762 CTGACGAAACCACAA TCACCGTGTTT TTA AACCACGGCGA TGCTTTGATTTTATT TERM 5911 4499331 - 4499347 + g 73 -3.7 -4.8622 | GCTGCATCGTGTGGC TGAAATC CAT GCTTTCA TTTTTAATTGCCCCC TERM 5912 4500054 - 4500067 + r 77 -3.9 -5.14965 | TTTTGTTCAGATTTG GTTTA TAAA TAAAC TTTTTTGATCACCGT yjjA 4500676 - 4500182 - | hypothetical protein dnaC 4501464 - 4500727 - | DNA biosynthesis protein TERM 5913 4501113 - 4501126 + g 81 -5.9 -4.74706 | GTTCATTACAGATTG CCGCC GCCA GGTGG TTTTTACCTGTTCCC TERM 5914 4501333 - 4501359 + g 74 -8 -4.06419 | gap 1, overlap 4501335 CCGGTTTTCTCGAGC CAGGGCGGCGG CACGGA TCGC-GCCCTG TTCTTTCTGCCAGGC dnaT 4502018 - 4501467 - | DNA biosynthesis protein (primosomal protein I) TERM 5915 4502100 - 4502073 - R 74 -9.2 -3.25717 | gap 1, overlap 4502071 4502069 ATCACACAGAAGACA GAGATCGGCAGGA TGC TGC-GCCGATCTC CAACATCACGTCGTT EFER_4400 4502665 - 4502114 - | hypothetical protein yjjP 4503354 - 4502578 - | conserved hypothetical protein; putative inner membrane protein TERM 5916 4503724 - 4503713 - gH 70 -7.2 -3.86015 | opp_overlap 4503715 CAGTTGTTGCATAAA GCGG GTAT CCGC ACCCTGATTATTGAG TERM 5917 4504062 - 4504044 - gH 76 -7.4 -4.15565 | opp_overlap 4504044 4504043 TTCACGATGCCAAAA GTGACCGA CCC TCTGTCAC CTTTGAAAAAGATGG EFER_4403 4503641 - 4504828 + | para-hydroxybenzoate hydroxylase (4-hydroxybenzoate 3-monooxygenase) (PHBH) EFER_4404 4504785 - 4505738 + | putative transcriptional regulatory protein TERM 5918 4506539 - 4506525 - gf 71 -3.4 -4.83615 | TAGCGCCCAGAAAAA CAGCGC CAT GCGTCG ATTAGCAATTCATAG EFER_4405 4505956 - 4506681 + | putative DNA-binding transcriptional regulator YjjQ12 TERM 5919 4506903 - 4506890 - gT 84 -3.7 -5.27938 | opp_overlap 4506891, overlap 4506891 ACTGGCAAATAAAAA TCCGC GTAT GCGGC GGTTGGTTATTGCCG TERM 5920 4506902 - 4506891 - gT 70 -7.2 -3.75678 | opp_overlap 4506891, overlap 4506890 CTGGCAAATAAAAAT CCGC GTAT GCGG CGGTTGGTTATTGCC EFER_4406 4506639 - 4507310 + | putative 2-component transcriptional regulator BglJ TERM 5921 4507339 - 4507318 - T 90 -11.6 -3.60865 | CAGTCTAAACGATAA TGCCGGGT AAGTTG ACCCGGCA GCGCGATTACTGGCA fhuF 4508158 - 4507370 - | ferric iron reductase involved in ferric hydroximate transport TERM 5922 4507462 - 4507431 - G 70 -10 -3.14881 | TAACGCTGGCAGCAA GTGCGGCGCACCAG CAGG CCGTCGCGCAGCAC CACGGTACGCCAGAG TERM 5923 4507688 - 4507708 + g 73 -11.9 -2.80922 | overlap 4507686 4507684 4507690 GCTGATTAACTTTTC CATTCGCTG CTG CGGCGAATG TGGTGTTGCGTTTTT yjjZ 4508299 - 4508535 + | hypothetical protein EFER_4411 4509749 - 4509330 - | hypothetical protein TERM 5924 4510125 - 4510148 + r 88 -12.4 -2.63102 | opp_overlap 4510120 4510119 AAAAAACAGTCATAT GCCCGATGTG CAAA CTCATCGGGC TCATATGGGGATACT rsmC 4511194 - 4510163 - | 16S RNA m2G1207 methylase holD 4511297 - 4511710 + | DNA polymerase III, psi subunit rimI 4511679 - 4512125 + | acetylase for 30S ribosomal subunit protein S18 yjjG 4512140 - 4512817 + | dUMP phosphatase TERM 5925 4512873 - 4512887 + F 72 -9.2 -3.14132 | opp_overlap 4512871 4512872 TCGTTTTCAACAAGC GCGGCG CGA TGCCGC TTACTCAAGAAGAAA TERM 5926 4512926 - 4512959 + F 80 -8.9 -4.06419 | gap 1, opp_overlap 4512934, overlap 4512934 ACGTTGTCTCCTTAT TTGCAAGAG-GTGGCG AAG CGCCGCACTTTTGCCA TTATTTCTCACCCCA EFER_4416 4513203 - 4514426 + | putative integrase TERM 5927 4514672 - 4514654 - T 100 -11.7 -4.11216 | GGCTGATGGCGAAAA GTGGCCC GATGA GGGCCAC AATACAGCTGTCACT flxA 4515019 - 4514687 - | conserved hypothetical protein; Qin prophage TERM 5928 4515429 - 4515468 + r 93 -12.3 -2.9914 | opp_overlap 4515419 AGCAATGGCTGCTCC TGGCACAGAGCAGACAG TCAGAT TTGTTTGGTCTGTGCCA TATCTGTGCCAGCTC yfdR 4516268 - 4515732 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 5929 4516186 - 4516211 + g 72 -4.8 -4.60949 | gap 1, opp_overlap 4516185, overlap 4516187 TTTGAAAGGGAAACC G-CGATATCGT TAATC ACGATGTCGTC TTTATTTATCCTGTC TERM 5930 4516187 - 4516209 + g 74 -8.5 -3.90309 | opp_overlap 4516185, overlap 4516186 TTGAAAGGGAAACCG CGATATCGT TAATC ACGATGTCG TCTTTATTTATCCTG TERM 5931 4516381 - 4516366 - R 86 -10.4 -3.86346 | opp_overlap 4516366 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATCAAA TERM 5932 4516366 - 4516381 + r 82 -10.4 -3.62096 | opp_overlap 4516366 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATCAAA yfdQ 4517221 - 4516397 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage EFER_4420 4517967 - 4517287 - | hypothetical protein TERM 5933 4517724 - 4517714 - GRH 70 -6.8 -4.02733 | overlap 4517717 CAAAACAGAGAAGAA CACC TGC GGTG GCAGCCGCCCGGATG EFER_4421 4518034 - 4517747 - | hypothetical protein TERM 5934 4517833 - 4517792 - GH 93 -8.7 -4.56597 | gap 1, overlap 4517794 TCTGTTTTGTAAAAA GAGCGGTACCAGCTGGAAGC AAG GGTACAAACTGGTACCGC-C AAGACTACACACAGC TERM 5935 4517832 - 4517794 - GH 100 -12.4 -3.90048 | overlap 4517792 TGTTTTGTAAAAAGA GCGGTACCAGCTGGAAGC AAG GGTACAAACTGGTACCGC CAAGACTACACACAG EFER_4422 4517855 - 4518634 + | hypothetical protein TERM 5936 4518675 - 4518690 + Tr 78 -2.4 -5.5112 | TTGTTAAAGAGCGAA GCGTGC ACTA GGGCGC TTTTTTGTTGCTAAC TERM 5937 4518839 - 4518816 - TR 81 -7.5 -4.7033 | opp_overlap 4518818 TAAGGCAAGAGAAAA CACCAAACT TTTCTT AGCTTGGTG CCTTAGTTAGAGAAG cII 4519488 - 4518862 - | Repressor protein C2 TERM 5938 4519363 - 4519374 + g 72 -4.4 -4.59773 | TGCTTCCCCGCCAGG GACA TTGA TGTC TTTTTCCCAGTACCC TERM 5939 4519511 - 4519524 + H 81 -5.3 -5.08601 | CCATTTCTTGAATTG CTAAG TAAT CTTAG TTTTTATTGACCTAA EFER_4424 4519587 - 4519787 + | putative dicC; repressor protein of division inhibition gene ymfL 4519711 - 4520376 + | putative nucleic acid-binding protein; e14 prophage ymfM 4520373 - 4520711 + | conserved hypothetical protein; e14 prophage TERM 5940 4521087 - 4521045 - g 95 -12.3 -4.2828 | gap 1 TCTGACCCATCAAAA TCTGACGCATCAAAATCTGA CCCG TCAAAATTTGATGCGTC-GA AATCTGGCAAAAAAG TERM 5941 4521117 - 4521102 - g 81 -4.6 -5.03747 | overlap 4521103 AAATCTGGCAAAAAA GCGGGT TTTC ACCCGT CAGAATCTGGCGGGG TERM 5942 4521210 - 4521174 - g 95 -7.1 -5.36441 | overlap 4521175 CCGTCAGATAAAAAA CCTTCTCGTCCGGACGC TTC GCAACCGGACACGCAGA CGGCTGAACAGGATT TERM 5943 4521209 - 4521175 - g 72 -8.4 -3.81141 | overlap 4521174 CGTCAGATAAAAAAC CTTCTCGTCCGGACGC TTC GCAACCGGACACGCAG ACGGCTGAACAGGAT EFER_4428 4520721 - 4521662 + | putative phage replication protein O TERM 5944 4522107 - 4522092 - gf 72 -6.8 -4.18197 | AGTGTTTACGGAAAA GCAGCA AGCG CGCTGC ATCGGGTGAAGAGTG yfdN 4521659 - 4522153 + | conserved hypothetical protein; CPS-53 (KpLE1) prophage EFER_4430 4522120 - 4522479 + | conserved hypothetical protein from phage origin with LexA DNA binding domain rusA 4522476 - 4522865 + | Crossover junction endodeoxyribonuclease TERM 5945 4522860 - 4522846 - f 76 -7 -4.51097 | opp_overlap 4522847, overlap 4522847 GTAAGTACGAGAAAA CGGCGG GTG CAGCCG CCTGATTAAGAGGAG TERM 5946 4523059 - 4523036 - g 73 -9.6 -3.62597 | overlap 4523037 CTGAGCGTTTAATAA GCGAGTTGCA GATT TGCAACTCGG TCAATATAGAGCCAG TERM 5947 4523058 - 4523037 - g 81 -13.1 -2.77344 | overlap 4523036 TGAGCGTTTAATAAG CGAGTTGCA GATT TGCAACTCG GTCAATATAGAGCCA EFER_4432 4522885 - 4523682 + | conserved hypothetical protein from phage origin TERM 5948 4524364 - 4524384 + G 72 -4.6 -4.66537 | overlap 4524367 GCTGGCGCTGAAAGT GGATCCGG AGTCG CCGGAGTC TTTTATGTTACGCCC EFER_4433 4523684 - 4524679 + | hypothetical protein ydfT 4524693 - 4525445 + | putative antitermination protein Q; Qin prophage TERM 5949 4525579 - 4525547 - T 78 -4.2 -5.08601 | gap 1, opp_overlap 4525555, overlap 4525550 4525555 CGACGTTAAGAAAAA GTAGAAAA-CCCGCT GATG AGCGGGTTTTTGTGC TTTAAATAGGGTAAT TERM 5950 4525575 - 4525550 - T 78 -10.5 -3.39061 | opp_overlap 4525555, overlap 4525547 4525555 CGTTAAGAAAAAGTA GAAAACCCGCT GATG AGCGGGTTTTT GTGCTTTAAATAGGG TERM 5951 4525570 - 4525555 - T 100 -10.4 -4.73912 | opp_overlap 4525555, overlap 4525550 4525547 AGAAAAAGTAGAAAA CCCGCT GATG AGCGGG TTTTTGTGCTTTAAA TERM 5952 4525555 - 4525570 + T 100 -10.4 -5.04325 | opp_overlap 4525555 4525550 4525547 AGAAAAAGTAGAAAA CCCGCT GATG AGCGGG TTTTTGTGCTTTAAA cspF 4526073 - 4525861 - | cold shock protein; Qin prophage cspB 4526376 - 4526591 + | cold shock protein; Qin prophage TERM 5953 4526889 - 4526876 - f 83 -9.5 -3.98159 | opp_overlap 4526876 TACCACAATATTAAA CCCGC TCAG GCGGG TTTTTTATTATCTGC TERM 5954 4526876 - 4526889 + F 100 -9.5 -5.60689 | opp_overlap 4526876 TACCACAATATTAAA CCCGC TCAG GCGGG TTTTTTATTATCTGC essQ 4527344 - 4527559 + | putative S lysis protein; Qin prophage TERM 5955 4528040 - 4528017 - g 100 -5.2 -5.94597 | opp_overlap 4528017 GAAGATGAAAAAAAA CGCCGCGA TGAGCAGT TTGCGGCG TTTTACGATTATTGC TERM 5956 4528017 - 4528040 + G 76 -7.4 -4.24123 | opp_overlap 4528017 GAAGATGAAAAAAAA CGCCGCGA TGAGCAGT TTGCGGCG TTTTACGATTATTGC EFER_4438 4527543 - 4528115 + | hypothetical protein ydfQ 4528437 - 4528970 + | putative membrane-associated lysozyme; Qin prophage ydfP 4528967 - 4529464 + | conserved hypothetical protein; Qin prophage cspI 4529828 - 4530040 + | cold shock protein; Qin prophage TERM 5957 4530248 - 4530261 + F 100 -8.1 -5.31059 | opp_overlap 4530244 4530248 4530247 AAAGTGAAAATGAAG GCTCC TTCG GGAGC TTTTTTGCTTAGTGT ynfN 4530386 - 4530541 + | conserved hypothetical protein; Qin prophage EFER_4444 4530621 - 4530887 + | hypothetical protein TERM 5958 4530953 - 4530968 + F 86 -6.8 -4.95302 | opp_overlap 4530945 4530953 CAAATTACCCATAAA CCTCGT TTTT ACGGGG TTTTGTTATATTTAA EFER_4445 4531183 - 4531389 + | hypothetical protein EFER_4446 4531942 - 4532433 + | conserved hypothetical protein from putative prophage EFER_4447 4532433 - 4534535 + | putative DNA packaging protein of putative prophage ( terminase large subunit) TERM 5959 4534680 - 4534692 + G 71 -10.5 -2.90075 | GGCAGGAGTGGGAGC GCCGC CTT GCGGC TCTGATTACACGACG EFER_4448 4534526 - 4534744 + | conserved hypothetical protein from putative prophage TERM 5960 4535239 - 4535265 + GF 73 -7.2 -4.1822 | opp_overlap 4535211, overlap 4535240 TCTGCCGGTGTTCAT TTCTGGCTGGAG GCG CTCGAGCCGGAC TTTATTCCCATGACC TERM 5961 4535240 - 4535264 + GF 79 -10.7 -3.10611 | opp_overlap 4535211, overlap 4535239 CTGCCGGTGTTCATT TCTGGCTGGAG GCG CTCGAGCCGGA CTTTATTCCCATGAC TERM 5962 4535380 - 4535360 - gf 100 -10.4 -4.37092 | gap 1 ATCTGGTGTATAAAA GCCGTCCCG TATC CGGG-CGGC AGATGGAAACCAAAG TERM 5963 4536182 - 4536141 - g 70 -5.1 -4.33165 | gap 1, overlap 4536142 CGAAATTGATGAAAA CCGCAAGCTGGATCTGGTAT TTG ATACC-GATCCGGCCAGTGA TAAAGGAGGCAGCAG EFER_4449 4534672 - 4536252 + | putative portal protein (head-tail preconnector protein) from putative prophage TERM 5964 4536409 - 4536434 + GF 100 -14.1 -4.7373 | opp_overlap 4536401, overlap 4536401 TATTAATTCACCGGG TGGCGATGTCT TTGA AGGCATCGCCA TTTTTAATGCGCTGA TERM 5965 4537191 - 4537219 + GF 83 -10.9 -3.53012 | TTGTGGGGGACGGGA TCCGCCAGGCGCT GAT GGCGCGTGCCGGA TTTGAAAAAACCGAA EFER_4450 4536005 - 4538224 + | putative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) TERM 5966 4538249 - 4538260 + F 100 -7.2 -5.64274 | ACAACAACTCTGATG GCCC GTAA GGGC TTTTTTTGTACCTGA TERM 5967 4538297 - 4538279 - g 73 -11.7 -2.75844 | opp_overlap 4538295, overlap 4538278 4538281 TTTTGTACCTGAAAT CAGCCCC TGAAC GGGGCTG TGCGGAGACAGTTAT TERM 5968 4538377 - 4538342 - g 71 -2.4 -5.01845 | TAGAAGAAGGAAAAA CGGTGGCGATTGTTGC CAGT GCAGCCATCAGCAGCG GAGATCTGGTGCAGG EFER_4451 4538266 - 4538634 + | conserved hypothetical protein from putative prophage TERM 5969 4538813 - 4538825 + G 70 -6.9 -4.06419 | GGATACCGCCCACGG CGCGG GGA TCGCG TTGTTTATGACGGAC EFER_4452 4538627 - 4538902 + | conserved hypothetical protein from putative prophage TERM 5970 4539033 - 4538997 - g 72 -8 -3.86897 | gap 1 CGCATGGGCGATAAA CCGTGTGGC-ACAGAAA GCGG TCTCGGTTGCCACCCGG CAGGTTGCCGGGAAT EFER_4453 4538914 - 4539492 + | Minor tail protein Z (GPZ) of prophage TERM 5971 4539543 - 4539560 + G 74 -3.3 -5.01732 | overlap 4539544 CGCCTTCGGGAACAG TGTGGAG ACAG CGCCACG TTTTTTGACGGGCTT EFER_4454 4539477 - 4539890 + | Minor tail protein U EFER_4455 4539896 - 4540645 + | Major tail protein V TERM 5972 4540666 - 4540683 + G 100 -14.1 -5.03314 | CGATACTCATCATTT GCCCCGG TTAT CCGGGGC TTTTTTGCAGGTGGA EFER_4456 4540664 - 4541092 + | putative minor tail component of putative prophage TERM 5973 4541304 - 4541317 + GF 74 -8.1 -4.07568 | overlap 4541280 CAGTGATGCTGCGGT GGCTG ATTT CAGCC TTTTACCGGAAGAGA EFER_4457 4541101 - 4541430 + | putative minor tail protein T of putative prophage TERM 5974 4541609 - 4541574 - gf 76 -9.6 -3.48276 | opp_overlap 4541558, overlap 4541600 CCGCCCGGCAGACAA CGCAGGCGGCTTCTTC GGCT GCAACAGCCGCCTCCG TCCATGCGCAGACGG TERM 5975 4541936 - 4541919 - gf 76 -7.7 -4.11394 | AGGTTACGGCGAAAA CCCGTGT TCTT ACACAGG CTGAGGAAGAGGCTA EFER_4458 4541372 - 4544467 + | putative tail length tape measure protein from putative prophage TERM 5976 4544662 - 4544693 + G 89 -13.1 -3.35679 | gap 1, overlap 4544656 4544658 4544657 TTTCTGGAACGGCAC GGTGGCGTCCG-TG CATTT CAGTGGACGCCACC TTATGACTGGAAACC EFER_4459 4544467 - 4544796 + | Minor tail protein M TERM 5977 4545030 - 4545046 + G 72 -7.9 -3.89346 | CAAGGGCAGTGCTGC CCGTCCG ACA CTGACGG TTTCTAACCTGCACG TERM 5978 4545117 - 4545137 + G 90 -9.7 -4.42653 | overlap 4545119 CGGCGGAACGGTGGT CAGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT EFER_4460 4544806 - 4545504 + | Minor tail protein L TERM 5979 4545536 - 4545520 - gf 71 -9.5 -3.02649 | overlap 4545522 ATCCCATGACAGAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA TERM 5980 4546015 - 4546045 + GF 82 -7.4 -4.45945 | overlap 4546014 4546012 AGGTGCCGTTGTCAG CGGCGCAGCCGGGC GAT GTGCTGCTGTGCTG TTTTGGTTCATCGGT EFER_4461 4545510 - 4546253 + | putative tail fiber component K of prophage EFER_4462 4546151 - 4546798 + | Tail assembly protein I from putative prophage TERM 5981 4546815 - 4546838 + F 71 -9.6 -3.01125 | opp_overlap 4546820, overlap 4546820 ACAAAATGTTTTATG TGAAACCGCC TGCG GGCGGTTTTG TCGTTTATGGAGCGT TERM 5982 4546833 - 4546820 - f 78 -9.5 -3.60098 | opp_overlap 4546815 4546820 ATGTTTTATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 5983 4546820 - 4546833 + F 100 -9.5 -4.64846 | opp_overlap 4546820, overlap 4546815 ATGTTTTATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG TERM 5984 4547009 - 4546989 - g 81 -6.1 -4.7497 | TGGAGGGATTAAAAA GTGTGCTGC TGA ACAGTACAC CGGTGCTGGACAATG TERM 5985 4548620 - 4548595 - g 72 -9.7 -3.30441 | GAGTATCCGTGAGAA CGACGACGGCA CGTA TGCCATCACCG CCGTGCAGCATATAC TERM 5986 4549055 - 4549067 + G 78 -9.1 -3.96148 | opp_overlap 4549047 CAGATCACCGCCACG CCGCA TCT TGCGG TTTATGATCCGACGG TERM 5987 4549292 - 4549305 + G 79 -4.5 -5.00616 | CCGAGTAATGATGCG TCCGG CTAT CTGGA TTTTTTCAAAGGAGA TERM 5988 4549918 - 4549904 - g 70 -4.2 -4.73108 | CTGATAAAAGGAAAA CTGTCT GCC AGTCAG ATTGAGGGCGATATT EFER_4463 4546859 - 4550347 + | Host specificity protein J of prophage TERM 5989 4550367 - 4550384 + F 100 -12.7 -5.4505 | opp_overlap 4550358 4550364 4550365 TTAAAACCCAAACCG GGCGCCA GAAA TGGCGCC TTTTTTATTGCAGAA TERM 5990 4550893 - 4550879 - g 70 -10 -3.25823 | TGGTCGCCACAGTAA CACGTC TCT GACGTG GGGGGCTGGCGTGCA EFER_4464 4550415 - 4551014 + | Putative Lom-like outer membrane protein of prophage TERM 5991 4551042 - 4551061 + F 100 -12.1 -5.26316 | opp_overlap 4551042 CACAGTGTTATGACA GCCCGCC GGTTCA GGCGGGC TTTTTTGTGGGGTGA TERM 5992 4551061 - 4551042 - f 83 -12.1 -2.79501 | opp_overlap 4551042 CACAGTGTTATGACA GCCCGCC GGTTCA GGCGGGC TTTTTTGTGGGGTGA TERM 5993 4551915 - 4551905 - g 81 -6.8 -4.59853 | CGAAGGCGGCAAAAA CGTC AGA GACG AATGCTAAGTCTTCT TERM 5994 4552228 - 4552208 - g 72 -4.5 -4.63542 | overlap 4552209 CAGAATCCTCAAAAA CGGCAGCCG CAT CGTCAGCCA GTTCGGCGGCGTCAT TERM 5995 4552395 - 4552377 - g 85 -6.6 -4.80882 | overlap 4552387 AGCTCAGAGCAAAAA TGCGGCAG AAT CCGCGGCA ACGCGCGCCGAGACA EFER_4465 4551073 - 4554453 + | putative side tail fiber protein of prophage tfaQ 4554453 - 4555028 + | putative tail fibre chaperone; Qin prophage pinR 4555716 - 4555126 - | putative site-specific recombinase; DNA invertase; Rac prophage ydfK 4556362 - 4556096 - | conserved hypothetical protein; putative DNA-binding transcriptional regulator; Qin prophage TERM 5996 4556869 - 4556836 - R 91 -8.2 -4.59853 | gap 1, opp_overlap 4556836 TGAATGGTTGAAAAA CCGCAGACACGTCGT ATGCA AGAACGTG-CTGCGG TTGGCTGGTGAACTT EFER_4470 4557186 - 4556938 - | DNA damage-inducible protein in prophage (dinI-like) TERM 5997 4557200 - 4557219 + H 78 -7.2 -4.46215 | overlap 4557198 ATAAAAATCCCTCTA CACTGTGT TTGT ATACAGTG TTATTTTTAACTGTA TERM 5998 4558331 - 4558310 - g 70 -5.9 -4.18018 | gap 1 GCTTCGTATTTAAAA TTCAGG-CCA ACA TGGACCCGAA ACACCGCGACCGCGT prfC 4557379 - 4558992 + | peptide chain release factor RF-3 TERM 5999 4559003 - 4559028 + F 100 -14.7 -2.68338 | overlap 4559001 4559000 ATTAATTCTTGCCTC CAGGGTGCGGC AGCC GCTGCGCCCTG TCAATTTCCCTTCCT osmY 4559385 - 4559990 + | periplasmic protein ytjA 4560099 - 4560278 + | hypothetical protein TERM 6000 4560328 - 4560310 - f 100 -14.6 -3.67989 | opp_overlap 4560310 AAAATTTTATCCAAA GCCAGTCC AAC GGACTGGC TTTTGCGGTTTTAGC TERM 6001 4560310 - 4560328 + F 100 -14.6 -4.28049 | opp_overlap 4560310 AAAATTTTATCCAAA GCCAGTCC AAC GGACTGGC TTTTGCGGTTTTAGC yjjU 4560400 - 4561473 + | putative esterase yjjV 4561470 - 4562252 + | putative DNase yjjW 4563245 - 4562382 - | putative pyruvate formate lyase activating enzyme TERM 6002 4563192 - 4563168 - GT 74 -6.4 -4.57837 | gap 1, overlap 4563156 4563170 ACAGCCCTGTAAAAA CAGAGCCAGAC GACT GCCTGGCCC-G TCAACGCAGGAGAAG TERM 6003 4563191 - 4563170 - GT 84 -10.1 -3.90316 | overlap 4563156 4563168 AGCCCTGTAAAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA yjjI 4564767 - 4563217 - | hypothetical protein TERM 6004 4565634 - 4565614 - g 88 -5.3 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCGGCGG GCGGCGTGCGTACTG deoC 4565025 - 4565804 + | 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked TERM 6005 4566336 - 4566378 + G 79 -9.9 -3.85698 | gap 1, overlap 4566325 AAGACGTCGGCGTGG CGATTATCGGCCAGA-CCAG CTCA CTGGCTCCGGCAGATAAACG TTTCTACGCGACCCG deoA 4565882 - 4567204 + | thymidine phosphorylase deoB 4567256 - 4568479 + | phosphopentomutase TERM 6006 4568488 - 4568507 + F 88 -10.7 -3.88498 | GTTCTGATGGATTTG GGCGGAG CAGTGA CTCCGCC TTTAATATGTCACAA deoD 4568536 - 4569255 + | purine-nucleoside phosphorylase TERM 6007 4569289 - 4569312 + T 100 -19.6 -4.87037 | CGATTGTCGTGTGAA GCCGGAGCGG GAGA CCGCTCCGGC TTTTTAGTATCTATT EFER_4482 4569679 - 4569416 - | conserved hypothetical protein, possible transcriptional regulator lplA 4570727 - 4569711 - | lipoate-protein ligase A TERM 6008 4570333 - 4570345 + g 70 -6.9 -4.07687 | overlap 4570334 4570338 CCTGAGACTTTACGG TCGCC TTC GGCGG TTTTCACCACCAAAT TERM 6009 4570638 - 4570628 - G 74 -2.4 -5.05113 | GCCAGAGAAACAAAA CGCG CTG CGTG GCGGGCATCTGGCGA ytjB 4571399 - 4570755 - | hypothetical protein TERM 6010 4571097 - 4571111 + g 70 -10 -3.23216 | opp_overlap 4571096 4571095 4571105 GCTTTCGCCAGAACG GGCGAT AAG ATCGCC TTGATCGTCATACAC TERM 6011 4572417 - 4572398 - g 82 -7.8 -4.48175 | opp_overlap 4572406 4572407, overlap 4572409 AAAAGTGAATGAAAA GACGGAAG TCAC CATCCGTC ACGCTGACCTGATGG serB 4571505 - 4572473 + | 3-phosphoserine phosphatase TERM 6012 4572503 - 4572475 - f 74 -10.4 -2.6953 | overlap 4572474 TGAATCAGAAGTAAT TGT-CCGCCCGTCA TCC TG-CGGGCGGCACA GCATTAACGAGGTAC TERM 6013 4573311 - 4573298 - g 78 -5.2 -4.87665 | GCGCAGCCATAAAAA CCGC TTCGGC GCGG TAAATGAACTGGGCG radA 4572522 - 4573904 + | repair protein radA homolog TERM 6014 4574073 - 4574049 - g 72 -5 -4.67641 | gap 1, opp_overlap 4574071, overlap 4574050 ATGCCAAAATTAAAA GCC-CCAGC GCGCAAAA GCTGGAGGC GTTGCACCGTTATTT TERM 6015 4574915 - 4574887 - g 70 -4.6 -4.56597 | gap 1 GGCGTTCTGCAAAAA GTACGAAGGG-CG CGAG CATCCGTTCGTAC AGGCGCTGATCGATG nadR 4573925 - 4575157 + | bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase TERM 6016 4575365 - 4575345 - g 70 -4.7 -4.44355 | overlap 4575346 GAATTGCAAAAAGAA CTCATCGGA ACT CCCGATAAA GGTGATCTCATTCAG EFER_4488 4575171 - 4575581 + | hypothetical protein TERM 6017 4575622 - 4575608 - g 70 -6.4 -4.15565 | TTGATGAGTTGAAAA CCTCTC TGG AAGAGG CTGTCGAGATTAAAC EFER_4489 4575571 - 4575867 + | hypothetical protein TERM 6018 4575914 - 4575879 - T 83 -11.8 -2.77235 | opp_overlap 4575880, overlap 4575876 TTAATCATTTAACTA TTACCGGATGCGATGC TGGC GCGCCGCATCCGGCAT TTTACGCATTACTTC TERM 6019 4575880 - 4575913 + T 100 -13.1 -4.15508 | opp_overlap 4575879 4575876 TAATCATTTAACTAT TACCGGATGCGATGC TGGC GCGCCGCATCCGGCA TTTTACGCATTACTT yjjK 4577590 - 4575923 - | fused putative transporter subunits of ABC superfamily: ATP-binding components slt 4577801 - 4579738 + | lytic murein transglycosylase, soluble TERM 6020 4579809 - 4579783 - f 91 -12.2 -3.4252 | overlap 4579784 CTTTAGCGAGTACAA CCGGGGGAGGCA TTT TGCTTCCCCCGC TAACAATGGCGACAT TERM 6021 4579808 - 4579784 - f 100 -15.7 -2.65298 | overlap 4579783 TTTAGCGAGTACAAC CGGGGGAGGCA TTT TGCTTCCCCCG CTAACAATGGCGACA TERM 6022 4579870 - 4579889 + G 72 -6.4 -4.3898 | opp_overlap 4579870 4579869 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 4579828 - 4580154 + | DNA-binding transcriptional repressor, tryptophan-binding yjjX 4580672 - 4580148 - | thiamin metabolism associated protein TERM 6023 4580497 - 4580512 + g 72 -8.2 -3.76224 | TTTGCCACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA TERM 6024 4581032 - 4581020 - g 95 -9.1 -5.00467 | CGAAGAAGAAGAAAA CTGGC GTC GCCAG CTGGTCAATGGCACC TERM 6025 4581286 - 4581274 - g 76 -9.1 -3.80573 | TGGACTATCAGGAAA GCCAG TGG CTGGC GTCAGGTTGGGTAGT ytjC 4580715 - 4581362 + | phosphoglyceromutase 2, co-factor independent rob 4582228 - 4581359 - | DNA-binding transcriptional activator TERM 6026 4581916 - 4581896 - G 72 -7.5 -3.92324 | overlap 4581877 4581900 TGGGCGAATACCAAA CGCACTCCA TTC TGGAGAACG ACGATACAGCGCAGG TERM 6027 4582736 - 4582726 - g 71 -2.4 -4.96646 | CGACAGAATTAAAAA CGGC AAA GCCC AGGGCGAGGTAGTGT TERM 6028 4582885 - 4582873 - g 81 -4.8 -5.14563 | TGGCTCACCAAAAAA TGCG ATTAG CGCA GTACCTGTGATGCCG creA 4582439 - 4582912 + | hypothetical protein creB 4582925 - 4583614 + | DNA-binding response regulator in two-component regulatory system with CreC TERM 6029 4584525 - 4584501 - g 74 -6.5 -4.52589 | TCGCTTTACAGAAAA CATTCTGAC GCAAAAT GCCAGAATG CAGACGTTGGTGGAG creC 4583614 - 4585038 + | sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon TERM 6030 4585770 - 4585784 + G 77 -2.8 -5.03747 | opp_overlap 4585770 GACGCTAACCAGCAA CTGG CCACACC CCAG TTTTTTAGGCGATTT TERM 6031 4586415 - 4586403 - g 72 -7.7 -3.965 | opp_overlap 4586411, overlap 4586411 GCCCAAAATGAAGAA TGCGA AAA TCGCA CACACAGATATGAGC creD 4585096 - 4586454 + | Inner membrane protein TERM 6032 4586492 - 4586476 - T 100 -11.5 -5.4833 | opp_overlap 4586476 TCAGGCAATAAAAAA CGGCGCC GGG AGCGCCG TTTTTACTGATTCAA TERM 6033 4586476 - 4586492 + T 100 -10.8 -4.81083 | opp_overlap 4586476 TCAGGCAATAAAAAA CGGCGC CGGGA GCGCCG TTTTTACTGATTCAA arcA 4587235 - 4586519 - | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA yjtD 4587869 - 4588555 + | rRNA methyltransferase SEQUENCE gi|218561636|ref|NC_011743.1| Escherichia fergusonii ATCC 35469 plasmid pEFER, complete sequence (length 55150) TERM 1 640 - 628 - g 70 -6.3 -4.2828 | TGCCAGCTACTAAAA CGTTT AAA AAACG CGCCAGTATAAAGCA repB 450 - 1316 + | Replication protein pEFER_0002 1855 - 1637 - | hypothetical protein pEFER_0003 1840 - 2007 + | hypothetical protein TERM 2 2024 - 2010 - fH 75 -7.2 -4.4078 | overlap 2013 TGGTCGTAACTAAAA TCAGAA TCC TTCTGA ATGACTCTCCTGTCT TERM 3 2562 - 2579 + G 74 -2.1 -5.05601 | gap 1, opp_overlap 2571, overlap 2559 2575 AGTACAGGGATCGCT TCGATAAA GCC TTTA-CGA TTTTTGTATGTAATC TERM 4 3070 - 3087 + G 72 -5.5 -4.56736 | GATGTTGACCCCTCT TCCACCG GCGA CGGTTGA TTTTCATTCTTCCCT parA 2249 - 3454 + | Plasmid partition protein A parB 3451 - 4428 + | Plasmid Partition par B protein samB 5781 - 4510 - | Protein samB TERM 5 5148 - 5177 + g 75 -4.9 -4.82901 | gap 1 TTTTGCGGATGAAGG CCGGGTTCG-TCAG AGC CAGATCGAGCGCGG TTTTTATGCCCAGCA pEFER_0007 6488 - 5781 - | Protein impA [Contains: Protein impA'] (modular protein) TERM 6 5958 - 5970 + gH 71 -6.9 -4.10657 | GGCGACAACGATATC GCCGT GCC GCGGC TTTTCAGCACTGTCC pEFER_0008 6370 - 6537 + | hypothetical protein TERM 7 7183 - 7147 - g 91 -10.8 -4.24285 | gap 1 GACACACGTAACAAA CCTCTGGCGCCGGGCGC TCAG GCGCA-GGAGCCAGAAG GATGATACGACCTGG TERM 8 7235 - 7214 - g 88 -8.7 -4.63675 | overlap 7215 ACGAAAGCAAACAAA CTGGCAGCC GCAT GGCTACCAA GGGTTCGGGTTCTTC TERM 9 7234 - 7215 - g 72 -10 -3.36578 | overlap 7214 CGAAAGCAAACAAAC TGGCAGCC GCAT GGCTACCA AGGGTTCGGGTTCTT pEFER_0009 6557 - 7309 + | Putative reverse transcriptase/maturase, RetA (fragment) pEFER_0012 7461 - 7736 + | transposase, ORF A, insertion element IS1 pEFER_0013 7655 - 8158 + | tranposase, ORF B, insertion element IS1 pEFER_0014 9008 - 9307 + | hypothetical protein TERM 10 9869 - 9889 + G 100 -12.5 -4.34223 | overlap 9870 CGCGTATTCAGGCTG ACCCTGCGC GCT GCGCAGGGC TTTATTGATTCCATT TERM 11 9870 - 9888 + G 100 -16 -3.1945 | overlap 9869 GCGTATTCAGGCTGA CCCTGCGC GCT GCGCAGGG CTTTATTGATTCCAT pEFER_0015 9620 - 10588 + | transposase, IS903.B TERM 12 10607 - 10597 - f 77 -8.2 -3.95435 | overlap 10598 TGCCTGAAAACACAA CCCG CTA CGGG GGAGACTTACCCGAA TERM 13 10781 - 10766 - f 82 -10.4 -3.66787 | opp_overlap 10771 TTAAAGTATAGATAA TGCCGC GTCA GCGGCA TGGAGGCGCCAGCTG pEFER_0016 10781 - 10999 + | hypothetical protein TERM 14 11124 - 11086 - f 100 -15.8 -4.3129 | opp_overlap 11086 CACCCATCATTAAAA GCGACACTACTCCCGGCC TTC GGCCGGGGGCGGCGGCGC TTTTCAGTGGTGGGG TERM 15 11086 - 11124 + F 100 -15.8 -4.21194 | opp_overlap 11086 CACCCATCATTAAAA GCGACACTACTCCCGGCC TTC GGCCGGGGGCGGCGGCGC TTTTCAGTGGTGGGG TERM 16 11147 - 11169 + F 76 -6.9 -4.49344 | gap 1 TGGTGGGGAGGGGCT CCTG-GCCGG CAAA CCGGCGCCGG TTTTATGATGAATTT pEFER_0017 11390 - 12061 + | putative transposase (fragment) pEFER_0018 12272 - 12093 - | conserved hypothetical protein from phage origin TERM 17 12375 - 12335 - gH 70 -4.9 -4.48483 | gap 3, overlap 12341 TACAAGAAAGACAAA TAGCAACGCCCCGG-AGTGC GGGA ACACTACCGAGGCG-T-CTA ACCAAACCGTTATAC TERM 18 12371 - 12341 - gH 91 -11.9 -3.55033 | gap 1, overlap 12335 AAAGACAAATAGCAA CGCCCCGG-AGTGC GGGA ACACTACCGAGGCG TCTAACCAAACCGTT pEFER_0019 12109 - 12813 + | hypothetical protein TERM 19 12820 - 12846 + FH 72 -9.5 -3.1886 | opp_overlap 12824, overlap 12824 12844 ACTTGTTGATACTAT GAAACCTACTG AAAAA CAGTAGGTTGC TTGATGGCATTCAAT TERM 20 12824 - 12842 + FH 73 -8.9 -3.40639 | opp_overlap 12824, overlap 12820 GTTGATACTATGAAA CCTACTG AAAAA CAGTAGG TTGCTTGATGGCATT TERM 21 12842 - 12824 - fH 78 -8.9 -3.81951 | opp_overlap 12824 12820 GTTGATACTATGAAA CCTACTG AAAAA CAGTAGG TTGCTTGATGGCATT TERM 22 13133 - 13121 - g 70 -5.5 -4.3129 | TATGTATGACGAAAA GCGCA GAG TGCAC TTGAAGACGAGCACA pEFER_0020 12882 - 13808 + | conserved hypothetical protein, putative transcriptional regulator TERM 23 13928 - 13908 - g 74 -2.6 -5.08824 | TCGCTACTGAAAAAA CTTCCA GAAGATGAG TGGAAG TCGCTGATCGTTGAG pEFER_0021 13818 - 14417 + | hypothetical protein pEFER_0022 14405 - 14998 + | conserved hypothetical protein, putative cytoplasmic protein TERM 24 18192 - 18173 - g 74 -2 -5.06414 | opp_overlap 18173 18179 TTGGTTGAAGAAAAA CGCACTCA TGCC TTAGAGCG TGTTGATCTGCGCAT pEFER_0023 15017 - 18694 + | Putative ATPase (modular protein) TERM 25 18896 - 18885 - g 70 -3.6 -4.66537 | TTCTGGAAGATAAAA CCAG AGAA CCGG GATAGTTATCAGTTT TERM 26 19683 - 19667 - g 70 -7.3 -4.09685 | overlap 19670 GGCGATTCTCGAAAA GAACTGG ACG CCAATTC GTGATGCGTTATTGC pEFER_0024 18711 - 20474 + | hypothetical protein TERM 27 20805 - 20817 + G 70 -5.5 -4.36914 | opp_overlap 20789 CATGACTATCTAGGC CACGG TTT TCGTG TTTTGTCGCACCCAG TERM 28 22853 - 22867 + G 93 -2.1 -5.68438 | GATCTTAAGCTTTCG CCTTT TTGAT GAAGG TTTTTTGTTTGATAC TERM 29 23077 - 23065 - g 81 -6.3 -4.87807 | opp_overlap 23069 CCAATAGACTAAAAA GACTT TCC AAGTC AGATTGGGATAGTTA pEFER_0025 20490 - 24143 + | hypothetical protein TERM 30 24564 - 24534 - g 70 -6.9 -4.11216 | gap 1 TGGGTATCCCGAAAA TGGCGC-TACGCAC GCAC ATTCGTAAGCGCCA GAGCTTTTTTGCCAA pEFER_0026 24143 - 26800 + | hypothetical protein pEFER_0027 26817 - 28892 + | putative ATP-dependent Lon protease pEFER_0028 29631 - 28885 - | conserved hypothetical protein, homologous to putative transposase, IS110 family pEFER_0029 29179 - 29000 - | putative transposase (fragment) TERM 31 29026 - 29066 + g 72 -10.3 -3.30159 | gap 1 CCTTTTCGAAGGCCT CCGGG-CTGACGCCGCCG AGATGA CTGTGGCGCCGGGCCCGG TTGTAGAACACTTCA TERM 32 29101 - 29118 + g 95 -9.8 -4.61199 | overlap 29115 AATCGAAAATATCCG CCCGGG CCATGT CCCGGG TTTTGTATATCCGCT tnpA 32634 - 29749 - | Similar to TnpA transposase TERM 33 31527 - 31550 + g 72 -5.2 -4.58395 | overlap 31528 CCATGGTGGCGGTCA GCCTGGTTGC CATT GCAACAAGGG TTTTTAAGCCGTCCC TERM 34 31998 - 31976 - G 74 -10.6 -3.14132 | overlap 31978 CGGTTGGCCGACGAA GAGTTCGAGC CAG GCTCGAACTG GCGCAGCCACACAAA TERM 35 31996 - 31978 - G 85 -13.2 -3.13403 | overlap 31976 GTTGGCCGACGAAGA GTTCGAGC CAG GCTCGAAC TGGCGCAGCCACACA TERM 36 32025 - 32015 - G 85 -8.2 -4.55287 | CGCAGCCACACAAAA CGGG TCA CCCG ATCATCAGCCGTCTC TERM 37 32661 - 32673 + H 70 -5.5 -4.55697 | TTTCAAAATCTGATA GCGTT CAA GACGC TTTGTTTATGAAGCT pEFER_0031 32760 - 33383 + | putative resolvase pEFER_0032 33393 - 33689 + | YahA protein pEFER_0034 37540 - 34376 - | transposase TERM 38 35053 - 35042 - Gf 72 -5.8 -4.3739 | CAGGCGTGGAGAAAA CTGG TATC CCAG CAGCCAGAAAAGGCC TERM 39 36001 - 36022 + gF 71 -2.3 -5.00339 | gap 1, opp_overlap 35993, overlap 36003 TGAGAAAGCAGAGCG TGTATC-CCC TGC GGGTGATATG TTTTTCCTTGTTAAT TERM 40 36121 - 36092 - Gf 79 -4.9 -5.00616 | gap 1 TGCGTCGTCAAAAAA CTGCCGCCGTGAGC TGA ACTCCCGGCTG-AG GTAGTCACAGGCATT TERM 41 36416 - 36427 + gF 79 -2.2 -5.24531 | gap 1 ATCCAGATCCTTCAG CGAGC GGA GC-CG TTTTTTCTGCCCAAT pEFER_0035 37509 - 38102 + | Resolvase transposon Tn3 bla 38285 - 39145 + | Beta-lactamase TEM precursor (Penicillinase) TERM 42 39227 - 39210 - f 70 -5.6 -4.27584 | opp_overlap 39210 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA TERM 43 39210 - 39227 + F 78 -5.6 -4.79223 | opp_overlap 39210 ATTTTTAATTTAAAA GGATCT AGGTGA AGATCC TTTTTGATAATCTCA pEFER_0037 39261 - 39854 + | transposase (fragment) tetD 40280 - 39864 - | TetD, putative operon control protein TERM 44 40066 - 40079 + g 74 -3.1 -5.00616 | overlap 40062 ATATAGCTAGCCAGT GTGAC CCCT GTTAC TTTTTTGAACAGCCG tetC 40293 - 40961 + | TetC, putative Transcriptional regulator TERM 45 41034 - 41008 - T 89 -7.4 -5.0538 | gap 1, opp_overlap 41008 41010, overlap 41010 CTTTATCGTAAAAAA TG-CCCTCTTG GGTTAT CAAGAGGGTCA TTATATTTCGCGGAA TERM 46 41008 - 41034 + T 72 -8.1 -3.81488 | gap 1, opp_overlap 41008 41010, overlap 41010 CTTTATCGTAAAAAA TG-CCCTCTTGG GTTA TCAAGAGGGTCA TTATATTTCGCGGAA TERM 47 41010 - 41031 + T 79 -10.9 -2.99057 | opp_overlap 41008 41010, overlap 41008 TTATCGTAAAAAATG CCCTCTTGG GTTA TCAAGAGGG TCATTATATTTCGCG TERM 48 41031 - 41010 - T 75 -10.2 -2.77166 | opp_overlap 41010 41008, overlap 41008 TTATCGTAAAAAATG CCCTCTTG GGTTAT CAAGAGGG TCATTATATTTCGCG tetA 42327 - 41074 - | Tetracycline resistance protein, class B (TETA(B) ) (Metal-tetracycline/H(+) antiporter) TERM 49 41439 - 41453 + g 71 -2.1 -5.01732 | gap 1 TATCTGCAATAAATC CGAGCA GTAC TGC-CG TTTTTTCGCCCCATT TERM 50 42335 - 42319 - G 82 -9.5 -4.18506 | GGAGTGGTAAAATAA CTCTATC AAT GATAGAG TGTCAACAAAAATTA pEFER_0041 42358 - 42984 + | Tetracycline repressor protein class B from transposon Tn10 pEFER_0042 43648 - 42962 - | putative bacterial regulatory protein of the arsR family pEFER_0043 44153 - 43656 - | hypothetical protein pEFER_0044 44355 - 44035 - | putative monooxygenase TERM 51 44115 - 44105 - G 70 -4 -4.59853 | overlap 44091 CTAATTTTGTAAAAA TCAA ATA TTGA CTCTCGCCCTTCTTG TERM 52 44141 - 44155 + g 71 -2.8 -4.74103 | overlap 44142 TCTTGTTGAGCTTTC GCATGT AAA ACATGA TTTTTCCATTGCAGA TERM 53 44907 - 44921 + G 72 -5.6 -4.4634 | AACCACATACCAGAA GCCGTC GTT GGTGGC TTTATTGTTGCAATT jemA 44799 - 46004 + | Sodium/glutamate symport carrier protein (Glutamate permease) JemA pEFER_0046 47578 - 46370 - | transposase, IS10 pEFER_0047 47886 - 48068 + | hypothetical protein pEFER_0048 47864 - 48667 + | Streptomycin 3''-kinase (Streptomycin 3''-phosphotransferase) (Streptomycin 6-phosphotransferase) (Streptomycin 6-kinase) TERM 54 49374 - 49400 + G 72 -10.2 -3.38564 | gap 1, overlap 49363 GCTGGACGTCGATCC GCGT-CGCCTG CTCGAC CAGGCGTACGC TTATGGGTGCCTTTC pEFER_0049 48658 - 49503 + | Streptomycin 3''-kinase pEFER_0050 50041 - 49475 - | putative transposase (fragment) TERM 55 49938 - 49948 + gT 77 -6.8 -4.53419 | GTGGAGAAATACTGA GTCC CAA GGAC TTTATTGTTCTGATC pEFER_0051 50205 - 49963 - | hypothetical protein pEFER_0052 50847 - 50260 - | putative transposase (fragment) pEFER_0053 51799 - 51383 - | hypothetical protein pEFER_0054 52026 - 51796 - | Virulence-associated protein vagC TERM 56 51989 - 52000 + g 70 -3.6 -4.70659 | GGCAGACGGATGGCG CGGT TATT GCCG TTTTTAAATATCGAA pEFER_0055 52600 - 52950 + | conserved hypothetical protein, putative Helix-turn-helix, Fis-type pEFER_0056 53001 - 53744 + | hypothetical protein, putative membrane transporter TERM 57 54073 - 54053 - g 77 -6 -4.66609 | overlap 54054 54065 CAGCGCACCGAAAAA GCGGCCAG GACAG CCGGCCGA GCTCCCGCCGGTAGC resD 53741 - 54517 + | Resolvase (Protein D) pEFER_0058 54865 - 54575 - | hypothetical protein